This program developed in Softberry by (A. Bachinsky and V. Solovyev) is based on approach presented
in Boudellioua I., Saidi R., Hoehndorf R., Martin, MJ., Solovyev V. (2016) Prediction of Metabolic Pathway Involvement in Prokaryotic UniProtKB Data by Association Rule Mining. PLoS ONE 11(7): e0158896. doi:10.1371/journal.pone.0158896
PathPred will identifies pathway for a given protein sequence (if its pathway is included in generated rules).
To correctly predict some of the pathways, a taxon (genus) of source organism must be specified. Pull-down menu Taxon contains a list of taxons that are present in prediction rules.
Return to page with other programs of group: Pathway prediction
Last modification date: 24 Jan 2017