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SyGraph

Web system for visualization of synteny alignments and comparison of assembly contigs
Build contains alignment using Genome Match or Nucmer software.

Paste alignment in GenomMath or Coords format:

Alternatively, load a local file with aligment:
Local file name:

Format of alignment:

Information about the length of the sequence
in the target file

Alternatively, load a local file:
Local file name:

  

Information about the length of the sequence
in the query file

Alternatively, load a local file:
Local file name:

Coverage threshold between contigs/chrs:

[Help
[Example1: Opisthorchis felineus vs Clonorchis sinensis (Top 10 homologous contigs)]
[Example2: Opisthorchis felineus vs Clonorchis sinensis (GenomMatch format)]
[Example3: Opisthorchis felineus vs Clonorchis sinensis (Coords format)]


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Last modification date: 19 Oct 2016