Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:19:10 2011 Seq name: gi|333032610|gb|GL891816.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld2, whole genome shotgun sequence Length of sequence - 8307 bp Number of predicted genes - 12, with homology - 11 Number of transcription units - 7, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 43 - 102 12.3 1 1 Op 1 . + CDS 162 - 356 180 ## ACICU_02038 hypothetical protein 2 1 Op 2 31/0.000 + CDS 356 - 1942 1684 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 3 1 Op 3 . + CDS 1939 - 3084 1029 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 4 1 Op 4 . + CDS 3098 - 3199 118 ## 5 1 Op 5 . + CDS 3203 - 3499 305 ## ABBFA_001525 Cyd operon protein YbgE (Cyd_oper_YbgE) family protein + Term 3507 - 3536 2.1 6 2 Op 1 . - CDS 3512 - 4036 431 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 4047 - 4104 12.1 7 2 Op 2 . - CDS 4109 - 4780 663 ## ACICU_02043 hypothetical protein - Prom 4917 - 4976 8.8 - Term 4954 - 4994 7.6 8 3 Tu 1 . - CDS 5006 - 5602 892 ## COG3560 Predicted oxidoreductase related to nitroreductase - Prom 5709 - 5768 11.6 - Term 5732 - 5773 6.6 9 4 Tu 1 . - CDS 5792 - 6898 719 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 - Prom 6934 - 6993 5.5 10 5 Tu 1 . - CDS 7006 - 7332 384 ## ABSDF2082 hypothetical protein - Term 7378 - 7423 8.2 11 6 Tu 1 . - CDS 7433 - 7792 499 ## ABBFA_001520 hypothetical protein - Prom 7920 - 7979 7.2 + Prom 7873 - 7932 9.5 12 7 Tu 1 . + CDS 8008 - 8241 387 ## ABBFA_001519 hypothetical protein + Term 8243 - 8278 3.5 Predicted protein(s) >gi|333032610|gb|GL891816.1| GENE 1 162 - 356 180 64 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02038 NR:ns ## KEGG: ACICU_02038 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 64 1 64 64 97 100.0 2e-19 MSLKNLDINSRLIREIAIILIIKVALLLTIKHIWFDAPTIPKNFDNQVAEHIAGDNSSHI KETR >gi|333032610|gb|GL891816.1| GENE 2 356 - 1942 1684 528 aa, chain + ## HITS:1 COG:VC1844 KEGG:ns NR:ns ## COG: VC1844 COG1271 # Protein_GI_number: 15641846 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Vibrio cholerae # 6 515 17 526 541 743 71.0 0 MISESVVDLSRFQFAMTAMYHFLFVPLTLGLAFILAIMETTYVISGKEIYKDMTKFWGKL FGINFALGVTTGLTMEFQFGTNWAYYSHYVGDIFGAPLAIEGLMAFFLESTFIGLFFFGW DRLSKVQHLGVTWLVALGSNMSALWILVANGWMQNPVGAAFNFETMRMELVDFGALIFNP VAQVKFVHTVSAGYVTGAIFVLAISSYYLLKKRDLPFARRSFAIAAIFGLASTLSVILLG DESGYELGDVQKTKLAAIEAEWDTHPAPAPFTLFGVPNHEEMRTDYAVKIPYALGLIATR STTKEVTGLKDLMQQHEVRIRNGMLAYAELEKLRAGDRSPELLASFEKNQKDLGYGLLLK KYAPNVVDASEQHIQAAVKDTIPNVTALFFSFRAMVASGFLMLLLFILATWAVAKRNAEN KPWLLKYALFALPLPWIAAQTGWYVAEGGRQPWSIGEILPTHLSASSLSTGDVWGSILAL AAFYTILLIIEMYLMIKFARLGPSSLHTGKYHFEKQEPKAAVNGEALS >gi|333032610|gb|GL891816.1| GENE 3 1939 - 3084 1029 381 aa, chain + ## HITS:1 COG:STM0741 KEGG:ns NR:ns ## COG: STM0741 COG1294 # Protein_GI_number: 16764111 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Salmonella typhimurium LT2 # 1 381 1 379 379 404 56.0 1e-112 MIEYELLKIIWWVLVGVLLIGFALTDGFDMGSMALMPFVGKTDNERRAAINTIAPHWDGN QVWFITAGGALFAAWPMVYSVAFSGMYWALLLVLFALFLRPVGFDYRSKLENTQWRNSWD WGLCIGGAVPALVFGVAFGNLFLGIPFSLDSTLRSEYSGSFFALLNPFALICGIVSLSML CAHGGAWLMLRTDGALKQRSAKATQIMAAIFLVCFLVIGAWLYFGQVPGYSYAAAVDPNA ALNPLAKEVVTNNNPGWMNNYSSYPITKVAPVLAILGAIIAFFTASKAKAGLSFAGTSLM IVGAILTAGFALFPFLLPSSVNPNSSLTMWDAVSSHRTLGVMTVAACIFVPIILIYTSWS YYKMWGVITNKHIESNSHSLY >gi|333032610|gb|GL891816.1| GENE 4 3098 - 3199 118 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWYFAWILGILMACFAGVLSALYIEHHQNLDEE >gi|333032610|gb|GL891816.1| GENE 5 3203 - 3499 305 98 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001525 NR:ns ## KEGG: ABBFA_001525 # Name: not_defined # Def: Cyd operon protein YbgE (Cyd_oper_YbgE) family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 98 1 98 98 153 100.0 2e-36 MATAMTASNQRKAQAFAMAISFLLALPLAVILLVHPSLMLDANGHYNHSQLMLVMVGISG GFIYGVGFVPHFWLWKWLFSPWIAWPLMLLGYYIWFLT >gi|333032610|gb|GL891816.1| GENE 6 3512 - 4036 431 174 aa, chain - ## HITS:1 COG:CC0871 KEGG:ns NR:ns ## COG: CC0871 COG0454 # Protein_GI_number: 16125124 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Caulobacter vibrioides # 13 160 30 180 194 79 34.0 4e-15 MIKLNFRLAEFSDIPTLVELINQSYREQQGRSWTTEVEYVKGQRINKEQLKQQLELPNSV LLIGEIDSSKVVTCIGLTFQSNTVEIGTFCTDPHVQNMKIGRSVLEYAEQFALHKVPELD SAIMYILNVRSELIAYYERRGYIKTGNHEPYPLDANVGLPLIPIKLIEMKKDLK >gi|333032610|gb|GL891816.1| GENE 7 4109 - 4780 663 223 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02043 NR:ns ## KEGG: ACICU_02043 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 223 1 223 223 394 100.0 1e-108 MTLRLSVAAMGLLLSGSVFSAVTITAPEEIVILAVNGQEVNSGLFRSSKNNYKVDAGETS LSVRYQEYFEHLSGEHDIVKSGVVTIQTPALKDGQTYKLAMVDAPKQFEQAKKYAEQPTV ALYNSNNELIVQQTGANNEARPWFASGLLGKVTDFTTKSSKQQPDAVYAAAKPTTTQANA PVATTMPPTGVAQTNDQRLAEIWKKSSKAERQKFMAWLAEQSN >gi|333032610|gb|GL891816.1| GENE 8 5006 - 5602 892 198 aa, chain - ## HITS:1 COG:PA2575 KEGG:ns NR:ns ## COG: PA2575 COG3560 # Protein_GI_number: 15597771 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Pseudomonas aeruginosa # 4 197 5 198 200 252 63.0 3e-67 MSTFLDKIKNRRTIYAIGKNVALDRTKIEETIREAVKHSPSAFNSQSSRVVTLYGESHAK FWNLVREALRKIVPADAFAGTNAKIDSFVAGVGTVLFYEDQAVVKSLQEQFELYADNFPV WSEHSSAIAQFATWTALSELGLGASLQHYNPIVDADAAEAFDVPATWKLRAQLVFGSVEA PAGEKAFISDEDRFKTFN >gi|333032610|gb|GL891816.1| GENE 9 5792 - 6898 719 368 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 67 364 21 320 336 281 46 1e-75 MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQP KSGFFGRMKEGLSKTRRNFTDGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIIT NLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDPNKSPYVILMVGVNGVGKTTT IGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAIN QVQEFDQAVGLTGITITKLDGTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFV AALFETEK >gi|333032610|gb|GL891816.1| GENE 10 7006 - 7332 384 108 aa, chain - ## HITS:1 COG:no KEGG:ABSDF2082 NR:ns ## KEGG: ABSDF2082 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 108 1 108 108 187 100.0 1e-46 MLTFKENFLKLKSELKADQCFNLVVIIIIGCIFMLSYLALLRPVNSEQYQRIVQLSRQAT YPRTQDMAELIMAQSEIHRAEYLKLMHAYQFEHNHIKQYPALAQEDTQ >gi|333032610|gb|GL891816.1| GENE 11 7433 - 7792 499 119 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001520 NR:ns ## KEGG: ABBFA_001520 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 119 1 119 119 233 100.0 1e-60 MTNTIDGFVFDNPPKEEQIIELAHYHRKLLDEAIFHQEIHLGDYCLAQRKRVFDYARQLD PNQKAWFYQVYDGELRKIADEDELHPADAEEGLSIFAMLLVLVIIAAILYFSVIRSLMG >gi|333032610|gb|GL891816.1| GENE 12 8008 - 8241 387 77 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001519 NR:ns ## KEGG: ABBFA_001519 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 77 1 77 77 123 100.0 3e-27 MIQRISHHDLEHVYATAVNTIQSQMNFQDAVAQLEEVARAGHGKAALFLAELYYQGFRVE RDSMKAQYWQKLATMQA Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:19:33 2011 Seq name: gi|333032609|gb|GL891817.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld3, whole genome shotgun sequence Length of sequence - 3154 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 1 - 721 100.0 # CP001182 [D:56013..57570] # 16S ribosomal RNA # Acinetobacter baumannii AB0057 # Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter. + TRNA 768 - 844 98.5 # Ile GAT 0 0 + TRNA 900 - 975 89.9 # Ala TGC 0 0 + LSU_RRNA 1311 - 3154 100.0 # CP001182 [R:3544626..3547532] # 23S ribosomal RNA # Acinetobacter baumannii AB0057 # Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter. Predicted protein(s) Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:19:39 2011 Seq name: gi|333032608|gb|GL891818.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld4, whole genome shotgun sequence Length of sequence - 20218 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 15, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 11 - 676 600 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Prom 1035 - 1094 5.2 2 2 Op 1 . + CDS 1115 - 1537 508 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 1568 - 1597 -0.2 + Prom 1545 - 1604 14.8 3 2 Op 2 . + CDS 1629 - 2054 424 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 1969 - 2029 -0.0 4 3 Tu 1 . - CDS 2051 - 2857 691 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 3053 - 3112 6.6 + Prom 3009 - 3068 10.2 5 4 Tu 1 . + CDS 3159 - 5738 1900 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 5757 - 5800 8.9 6 5 Tu 1 . - CDS 5795 - 6283 428 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) - Prom 6327 - 6386 5.1 + Prom 6378 - 6437 6.1 7 6 Tu 1 . + CDS 6552 - 6968 405 ## ABBFA_002389 hypothetical protein 8 7 Tu 1 . - CDS 6994 - 9219 2549 ## COG1092 Predicted SAM-dependent methyltransferases - Prom 9336 - 9395 9.1 + Prom 9326 - 9385 5.9 9 8 Tu 1 . + CDS 9437 - 9781 494 ## ACICU_01169 hypothetical protein + Term 9791 - 9833 5.1 + Prom 9783 - 9842 2.3 10 9 Op 1 15/0.000 + CDS 9905 - 10921 1138 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 11 9 Op 2 . + CDS 10934 - 12169 1583 ## COG0044 Dihydroorotase and related cyclic amidohydrolases + Term 12204 - 12241 6.0 + Prom 12247 - 12306 7.9 12 10 Op 1 . + CDS 12383 - 13798 1491 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 13833 - 13864 3.1 + Prom 13800 - 13859 9.3 13 10 Op 2 . + CDS 13885 - 14664 600 ## ACICU_01173 hypothetical protein 14 11 Tu 1 . - CDS 14675 - 15301 806 ## COG0625 Glutathione S-transferase - Prom 15391 - 15450 3.0 - Term 15425 - 15471 8.2 15 12 Tu 1 . - CDS 15472 - 16188 843 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + Prom 16244 - 16303 3.8 16 13 Tu 1 . + CDS 16334 - 18772 2538 ## COG2374 Predicted extracellular nuclease + Term 18774 - 18817 -0.5 + Prom 18900 - 18959 4.7 17 14 Tu 1 . + CDS 18980 - 19591 741 ## COG0625 Glutathione S-transferase + Term 19616 - 19647 2.1 - Term 19592 - 19645 17.8 18 15 Tu 1 . - CDS 19655 - 19999 559 ## ABSDF1485 hypothetical protein - Prom 20040 - 20099 8.8 Predicted protein(s) >gi|333032608|gb|GL891818.1| GENE 1 11 - 676 600 221 aa, chain - ## HITS:1 COG:PA0652 KEGG:ns NR:ns ## COG: PA0652 COG0664 # Protein_GI_number: 15595849 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Pseudomonas aeruginosa # 25 217 16 211 214 224 54.0 1e-58 MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSI ILREDDEREIVVAYLNPGDFFGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQY PDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLIDLSSQPEAMILPNGRQIRITR QEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR >gi|333032608|gb|GL891818.1| GENE 2 1115 - 1537 508 140 aa, chain + ## HITS:1 COG:PA0653 KEGG:ns NR:ns ## COG: PA0653 COG1765 # Protein_GI_number: 15595850 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Pseudomonas aeruginosa # 1 138 1 138 140 173 61.0 8e-44 MQTSVHWLENVAFEAKSESGHSVVMDGSPEYGGENRGPRPMELILMGLGGCASFDIVTIL KKSRQDVTNVVCQLKAERADAIPAVFTKIHLHFVVTGKAVKEKQVAKAVELSAEKYCSAS KMLSDGGVEITHDFEIIEAA >gi|333032608|gb|GL891818.1| GENE 3 1629 - 2054 424 141 aa, chain + ## HITS:1 COG:STM4287 KEGG:ns NR:ns ## COG: STM4287 COG0454 # Protein_GI_number: 16767537 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Salmonella typhimurium LT2 # 3 140 16 154 154 62 34.0 3e-10 MNIRLAQWEDTETICYLLKQMGYSQPLKVVQEQFQILSKDPNAITLVAADDLKVYGILSL YFIPQIALQGEFAKICYLCVDEKMRSKGVGHLLVQEAERLAKQRGCDRMELHSGIQRPLA HQFYLREGYVEAPKYFRKALN >gi|333032608|gb|GL891818.1| GENE 4 2051 - 2857 691 268 aa, chain - ## HITS:1 COG:PA3787 KEGG:ns NR:ns ## COG: PA3787 COG0739 # Protein_GI_number: 15598982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Pseudomonas aeruginosa # 29 264 36 277 282 211 47.0 1e-54 MRLKHIILTTCLFSSTLAMAELPQDSRRPGGIAVIPLTSDITQVTFQHKPVLISQEGQQR YAVFGIPLSTPLGSVQLDTNKAPIQIEVKSYPYAEQRLKVTNQDYVNPNQSQLDRYAQEA KEQNDVYSSFTQSSWQALPKFIRPTSGKFTNSFGRKRFFNGEERAPHSGLDIPAPIGQKV VAPADGVVVQTGHYFFNGQTVLIDHGQGLISMFCHLSEIKVEKGQHIRQGETLGLVGKTG RVTGPHLHWGMSLNNARVDPQLFLTTTH >gi|333032608|gb|GL891818.1| GENE 5 3159 - 5738 1900 859 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 852 1 808 815 736 46 0.0 MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQ KLEQALKDAPTIANPTGDVNLNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETK NILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGR DDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLG SLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPAL ARGELRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGV QILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLK MQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKAR IAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSA ATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFL FLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVL TEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGS QDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRL RSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGD TILVKGENGHLVFDKLKLS >gi|333032608|gb|GL891818.1| GENE 6 5795 - 6283 428 162 aa, chain - ## HITS:1 COG:UU083 KEGG:ns NR:ns ## COG: UU083 COG1546 # Protein_GI_number: 13357639 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Ureaplasma urealyticum # 8 120 10 118 156 66 41.0 2e-11 MLQQCCQLLEDRLLKVAFIESASSGYLTSQFSIHKNSGADILLGGLVSYDPSIKISVLKV DPKLIETYTAESPQVTEEMCRLGQTLFQQADIVVSCTGLLKPGGSETTEKPVGTFFICIS YLGRIYHYHYFLSGHAEQKLKTLTQKVADSIIALISSNQHKS >gi|333032608|gb|GL891818.1| GENE 7 6552 - 6968 405 138 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002389 NR:ns ## KEGG: ABBFA_002389 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 138 2 139 139 256 100.0 2e-67 MNNKQGCVLGILSCIAVLPTNLWAAQPMNESALATQTGAVTAALPVIIAKAQDDAKKPEI EQRQVRQTLGDNYLQQVRWNSLRTSVLSPYQEQKQNQVIDGKEKKKLEMVALPERADRFT RYDFESKNVHGEVIITVK >gi|333032608|gb|GL891818.1| GENE 8 6994 - 9219 2549 741 aa, chain - ## HITS:1 COG:PA3048_2 KEGG:ns NR:ns ## COG: PA3048_2 COG1092 # Protein_GI_number: 15598244 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 418 735 1 314 317 381 59.0 1e-105 MFWSIEFMNTSLRLNHYWITCADGLETLLQEEIEQLGTKVTERKAGRLIIEGTLEHAYRI CMWSRLASRVLLPIHTYELERTHDARDVAEELYEGAISFDWSLIFAPQSTFAIRLHAERE IKVNTQFATLRVKDGVVDSFMEAVGRRPSIDTKQPEITLYVLAGKTEHTYCLDLSGDSLH KRGYRRFMTDAPIKENLAAAILQKAKLKERNPEIVLDPMCGSGTFIIEALMILTDRAPGL VRRFGFNGWHGHDRELWLSLKAEAAERHEKALEQPLPKFYAYDADWEAVKATRENIIAAG FEKLLGDIQIEERTLADWPDFGAENKTAFIVTNPPYGERLGDKASNRSLYLGLSALLQKN FPNQYAAIIAAQIEQADVLAFEAPETLRLMNGKLPIYVRFGTVKPEKVTQPFLANWQAQP VEMEEAQDFANRLQKNMTALKKWATKENIYCLRLYDADLPDFNLAVDLYGDRLHVQEYAP PKKIDPEKAKKRFNLALAAIRAVTGLNRDAIFIKTRARQTGTNQYTKQSTANKRFIVQEG KAKILVNLTDYLDTGLFLDHRQMRLRIAKEARGKHFLNLYSYTSTASLHAALGGAASTTS VDLSNTYLSWSKENFVLNGLTVDHADEQHMFFASDCFEWLKEGHEQYDLIFIDPPTFSNS KKFHGTFDVQRDHVSLIKRAMNRLTSEGTLYFSNNYRGFEMDEEIEALYEVEEITSETIG PDFKRNQKIHRAWKIQHPGLN >gi|333032608|gb|GL891818.1| GENE 9 9437 - 9781 494 114 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01169 NR:ns ## KEGG: ACICU_01169 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 114 1 114 114 202 100.0 3e-51 MKDMMGNGFIANAEAFTLATQIYVRMRRVTGRVIDAMYVVRNKDYAKYVIALALEAEDDE LKRCVERLMVLTDSIPEQSQKEMTVSIQTSEESEITAEDIYRAQVPHHYIGALR >gi|333032608|gb|GL891818.1| GENE 10 9905 - 10921 1138 338 aa, chain + ## HITS:1 COG:PA0402 KEGG:ns NR:ns ## COG: PA0402 COG0540 # Protein_GI_number: 15595599 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Pseudomonas aeruginosa # 12 332 9 328 334 407 65.0 1e-113 MHIAALHQPSQVQLNQDGNLKHFLTIEGLSKENLTKILDTAQSFLDDNNNLINRPLLEGR TVMNLFFENSTRTRTTFEAAAKRLSANVLNIDIARSSTSKGETLRDTLWNLEAMAADIFV VRHSSSGAAHFIAKDVCPKVAIINAGDGRHAHPTQAMLDMLTIRRETKKPFEDLSVAIIG DIKHSRVARSDVAALQTLGCKDIRVIAPNTLLPVGFSEYGDHVRLFNNMDEGITGCDVII ALRIQNERIDSPALSSQSEFYRMYGLNKERLSLAKPDCIVMHPGPMNRGVEIDSSIADGE QSVILKQVTNGIAVRMAVLALSMQGQLQEQGLIEAIAL >gi|333032608|gb|GL891818.1| GENE 11 10934 - 12169 1583 411 aa, chain + ## HITS:1 COG:PA0401 KEGG:ns NR:ns ## COG: PA0401 COG0044 # Protein_GI_number: 15595598 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Pseudomonas aeruginosa # 4 409 3 414 423 287 39.0 3e-77 MSIVKIENVRVLDPIQKTDSVQTVYLQDGKLIAPVDQVEQTIDGQGKWLMPTMVDLCARL REPGQQQHGTLKSEGKAARANGILHVITPPDSKPIVQDNGALIHGLIEKAWHDGGIHMHI IGAQTQGLNGKQPANMAGLKKGGCTAVSNANAAFENDDVVVRTLEYAAGLGLTVVFYAEE PQLAKDGCAHEGFIASRQGLPMIPAIAETVAIAKYLLMIEATGVKAHFGLLSCGASVELI RAAKAKGLPVTADVAMHQLHLTEQLIDGFNSLAHVRPPLRSEQDKELLRQGLKQGVIDAI CTHHEPLSSSAKMAPFAETQPGITAFDTYVALGIQLINEGLFEPLEWVTKVTSAPAQVAN MTARWQAEAGWVLVDPELSWTVSKDTILSQGKNTPLLGQKLTGKVLQTFAV >gi|333032608|gb|GL891818.1| GENE 12 12383 - 13798 1491 471 aa, chain + ## HITS:1 COG:RSp0761 KEGG:ns NR:ns ## COG: RSp0761 COG2885 # Protein_GI_number: 17548982 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Ralstonia solanacearum # 334 471 139 277 277 97 41.0 6e-20 MSINPIELLKEKVSSTILNNQDGYLGEKTNALSKFYPILLSLLAAKPDLIGQLKNSLAPS LSDLFSHNEQIKNTVLTHLSGTAPNNEIENTLNSALKPSLNAISDVAGNDQQSIVNYLRQ HAETIRSYLPGWAVGLLAPLGIGAGLSSVTSSTAPPLAAATETTGKSRGFLPIIALIILG LLIAWLWRSCQHKEATPAPETKAASGVEAAAAPATLTLSTDDKGAVSQCQAGIGDQGFLA TLQTQVKQVFSATKDCDVDTSQTYAAAFTDKDALAGVLGALKGIPDASLEWVGDKITLKA GDAAALEALTAKVKALVPHTEVVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVK ALNLQIINFASGSSDIPADNKAILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQR RAQAVVDYLVSKGVDASKLVAKGHGSEQPVADNTTEEGRFKNRRIEFSVAQ >gi|333032608|gb|GL891818.1| GENE 13 13885 - 14664 600 259 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01173 NR:ns ## KEGG: ACICU_01173 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 259 1 259 259 490 100.0 1e-137 MKISLLGSGRVAFHLAKALLAQGHHIAQVYARDFEKTKKFAEQIQAKACQSLQEFQPSDL IILAVSDSAITELATQVHEIFPETLMVHTSGSTDIQVISNIHEKAGVFYPLQTFSLERDV DWQATPLFVEATNKDDLVILSDLANSLSKRVYQYTSKQRLTLHLAAVFACNFSNYCFDMA KQVVDAEQVDFGLLYPLILETAKKATENDPKQMQTGPAMRGDQNILVMHQSLLAQANRDD LKQVYQLLSDGIVKRHHSS >gi|333032608|gb|GL891818.1| GENE 14 14675 - 15301 806 208 aa, chain - ## HITS:1 COG:PA1890 KEGG:ns NR:ns ## COG: PA1890 COG0625 # Protein_GI_number: 15597087 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pseudomonas aeruginosa # 1 208 1 207 207 251 59.0 6e-67 MLKILGRDNSINVRKVLWLCDELNLTYEREDWGIGFRSAQSPEFLQLNPNGQIPVILDGD LVLWQSNSIIRYLANAYDKDHILYPTQAKQRAIIDQWVDWQAIELNNSWTYAFMSLIRHS ALHQDPNLLQQGIDQWNKQMQILDQQLAKTQAYLAGTEFTLADIPIGLSVQRWKATPFDH PALKHVDQYFERLNQRKGFLKWGNNGQP >gi|333032608|gb|GL891818.1| GENE 15 15472 - 16188 843 238 aa, chain - ## HITS:1 COG:STM3109 KEGG:ns NR:ns ## COG: STM3109 COG0220 # Protein_GI_number: 16766410 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Salmonella typhimurium LT2 # 20 238 18 239 239 202 50.0 3e-52 MSIDQLETQIAELDNLPEHREIVTFMRRSAPLNTSQRTALEQHRDLILEYPVGDLRQHFE HPERPLTVEIGFGMGRSLVLMAKANPERNYVGIEVHVPGIAQCVYEAGMAELKNLRVLDA DAIQVLREMPDNSINCVQLYFPDPWQKKRHFKRRFVIHERMQLVEQKLELGGTFHAATDW EPYAEWMLDVLDNRPDLENLAGKGNSYPRPEWRPVTKFERRGIESGHKINDFIFKKIK >gi|333032608|gb|GL891818.1| GENE 16 16334 - 18772 2538 812 aa, chain + ## HITS:1 COG:PA3909 KEGG:ns NR:ns ## COG: PA3909 COG2374 # Protein_GI_number: 15599104 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Pseudomonas aeruginosa # 27 778 24 769 779 423 37.0 1e-118 MKTFQLKTLSVFLSALGAFSYSSVAQAQLMFSQYVDGSNNKKGLEIYNPDGTTVNLADYE IQQFNNGGTAKTATFRLQGTLASKQKFLVGRSELQTELGNKVHQVAALSFNGDDAVVLVY KGTPVDRFGRIGERPEAGWGTAVSSLGNSFKRIETENPALSIDPTAAFDLDHSWTAWANR NDFTNLSGTTTQPPIETVSCSSSDTPIADLATSAQNQTYTVRGVITADYRYANGFSGFYV QTPDTKARANVSNAIFVYIPNSSTVKGGQIGDEVILRGRLTSYQNQLQIDQLQQDIQTCN SNMANQVQPISLELPFSSLTGGSTHSPQRYQGMLVKLPQTLTVSENYNYGRYGELSLSLG RLYIPTNLYPALSPEAKALAQKNLLSKIIFDDGYNNQNRTPWLPTNFSAANTLRSGYQLK NVEGILEYRFNGWRVQPVLGRTQPEVIAQTNPRQNIITKNANHIRVASFNVLNYDNGATG FPTERGANTQAEFDKQHRKIVSALKSIDADVYGLMEIANNGYGPNSAIAHLTSALGPDWK YVIPENLDRLGNDVIAVAIIYNSKRVKSLNKAVVLDLGDKNRTTLAQTFQAVRGNKTFTV IPNHLKSKGCSGVDANSSNADQNDGQGCWNPTRVKAVDQIVQWLAKNPTQVPKQNALLVG DMNSYAKEAPILAFEKANYKVLLNDAKVGQGAQAYSYVFGVASDANGNGGAGNLDHAIAD ADLYPKVVRTFAWHINADEPTVLDYNEEYKTDEQKALFYSEDAYRSSDHDPVIVDLDLNG KDSNQPNDNQKSPIFDFLSQLMEWISQLFKRS >gi|333032608|gb|GL891818.1| GENE 17 18980 - 19591 741 203 aa, chain + ## HITS:1 COG:YPO2367 KEGG:ns NR:ns ## COG: YPO2367 COG0625 # Protein_GI_number: 16122590 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Yersinia pestis # 1 201 1 200 201 172 44.0 5e-43 MKLYYSPGACSLAAHIILNEINVDFDLERVNLKTHKTEKGADYYEINPKGYVPALEINPG LILTENVAILPFLAQHDPKQDLIPPSGLGRAKVLEWLGYLNSELHDAYAVFFGAPLTNDE KTKAYAEIDRLLKYIDNYLAESDYDYLVNDNFGPADAYLFVLTNWSNSIEHDLTPYKHII ALRNKVAERQSVQIAMRDEGLIS >gi|333032608|gb|GL891818.1| GENE 18 19655 - 19999 559 114 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1485 NR:ns ## KEGG: ABSDF1485 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 114 1 114 114 93 98.0 2e-18 MNKLLVALGLAATVALVGCNKDKAPETGATTGEHLENAAQQASADIKSAGDQAASDIATA TDNASAKIDAAADHAADATAKAAAETEATARKATADTAQAVENAAADVKKDAQH Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:20:08 2011 Seq name: gi|333032607|gb|GL891819.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld5, whole genome shotgun sequence Length of sequence - 57072 bp Number of predicted genes - 60, with homology - 58 Number of transcription units - 37, operones - 10 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 106 - 157 4.1 1 1 Tu 1 . - CDS 167 - 1597 1521 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 1618 - 1677 6.9 + Prom 1645 - 1704 8.9 2 2 Op 1 1/0.462 + CDS 1838 - 2257 317 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 3 2 Op 2 . + CDS 2254 - 2739 596 ## COG0386 Glutathione peroxidase 4 2 Op 3 2/0.308 + CDS 2739 - 3584 551 ## COG2207 AraC-type DNA-binding domain-containing proteins 5 2 Op 4 . + CDS 3649 - 4281 333 ## COG1280 Putative threonine efflux protein - Term 4270 - 4330 3.9 6 3 Op 1 1/0.462 - CDS 4339 - 5565 1220 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 7 3 Op 2 . - CDS 5534 - 8197 2620 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 8 3 Op 3 . - CDS 8225 - 9433 1469 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) - Prom 9457 - 9516 6.9 9 4 Tu 1 . - CDS 9545 - 9934 391 ## ACICU_01514 hypothetical protein - Prom 9985 - 10044 8.2 - Term 9974 - 10033 1.2 10 5 Op 1 . - CDS 10063 - 10404 370 ## ABSDF2171 hypothetical protein 11 5 Op 2 . - CDS 10406 - 11128 669 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 11162 - 11221 6.9 + Prom 11164 - 11223 2.5 12 6 Tu 1 . + CDS 11248 - 11718 518 ## ABBFA_002008 hypothetical protein + Term 11738 - 11768 1.2 - Term 11726 - 11756 1.2 13 7 Tu 1 . - CDS 11791 - 12126 340 ## ABBFA_002007 hypothetical protein - Prom 12158 - 12217 2.6 14 8 Tu 1 . - CDS 12299 - 13006 647 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 13057 - 13116 3.8 + Prom 12926 - 12985 5.2 15 9 Tu 1 . + CDS 13099 - 13620 563 ## COG4539 Predicted membrane protein + Term 13624 - 13668 9.7 - Term 13612 - 13655 9.5 16 10 Op 1 . - CDS 13665 - 14756 1511 ## COG0012 Predicted GTPase, probable translation factor - Prom 14789 - 14848 5.8 - Term 14798 - 14828 3.6 17 10 Op 2 32/0.000 - CDS 14850 - 15509 1051 ## COG2011 ABC-type metal ion transport system, permease component 18 10 Op 3 10/0.077 - CDS 15490 - 16560 1166 ## COG1135 ABC-type metal ion transport system, ATPase component 19 10 Op 4 3/0.231 - CDS 16572 - 17405 976 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 20 10 Op 5 1/0.462 - CDS 17419 - 18249 940 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 21 10 Op 6 4/0.231 - CDS 18264 - 19676 1403 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 22 10 Op 7 12/0.077 - CDS 19676 - 20899 1424 ## COG1960 Acyl-CoA dehydrogenases 23 10 Op 8 . - CDS 20912 - 22147 1384 ## COG1960 Acyl-CoA dehydrogenases - Prom 22269 - 22328 10.0 + Prom 22231 - 22290 11.2 24 11 Tu 1 . + CDS 22493 - 23257 740 ## COG0625 Glutathione S-transferase + Term 23269 - 23315 12.2 + Prom 23589 - 23648 3.2 25 12 Op 1 31/0.000 + CDS 23795 - 24688 978 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 24710 - 24760 9.1 + Prom 24703 - 24762 3.5 26 12 Op 2 17/0.000 + CDS 24783 - 25625 777 ## COG0765 ABC-type amino acid transport system, permease component 27 12 Op 3 34/0.000 + CDS 25628 - 26305 704 ## COG0765 ABC-type amino acid transport system, permease component 28 12 Op 4 . + CDS 26319 - 27062 494 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 27079 - 27106 0.1 - Term 27051 - 27106 7.3 29 13 Tu 1 . - CDS 27114 - 28445 1458 ## ACICU_01534 putative DcaP-like protein - Prom 28511 - 28570 8.6 30 14 Tu 1 . + CDS 28776 - 29246 404 ## COG1522 Transcriptional regulators + Term 29251 - 29279 1.0 - Term 29231 - 29273 6.8 31 15 Op 1 . - CDS 29277 - 30026 1030 ## COG0217 Uncharacterized conserved protein - Prom 30061 - 30120 4.5 - Term 30117 - 30145 -0.0 32 15 Op 2 . - CDS 30189 - 30734 617 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 30857 - 30916 11.8 33 16 Tu 1 . - CDS 30920 - 31480 461 ## COG1309 Transcriptional regulator - Prom 31515 - 31574 9.1 + Prom 31637 - 31696 7.6 34 17 Tu 1 . + CDS 31755 - 32618 687 ## ACICU_01539 hypothetical protein + Term 32783 - 32819 7.5 - TRNA 32816 - 32892 91.8 # Met CAT 0 0 + Prom 32890 - 32949 6.9 35 18 Tu 1 . + CDS 33050 - 34282 762 ## COG0582 Integrase + Term 34449 - 34496 0.0 + Prom 34535 - 34594 10.3 36 19 Tu 1 . + CDS 34738 - 34836 109 ## + Term 34845 - 34877 0.7 - Term 34815 - 34856 -1.0 37 20 Tu 1 . - CDS 34867 - 35766 764 ## COG0583 Transcriptional regulator - Prom 35801 - 35860 5.0 + Prom 35775 - 35834 4.0 38 21 Tu 1 . + CDS 35856 - 36293 452 ## COG4125 Predicted membrane protein + Term 36306 - 36354 9.8 - Term 36293 - 36341 8.2 39 22 Tu 1 . - CDS 36351 - 37766 955 ## COG1457 Purine-cytosine permease and related proteins - Prom 37899 - 37958 9.6 - Term 37984 - 38012 1.0 40 23 Tu 1 . - CDS 38019 - 38483 390 ## ACICU_01544 hypothetical protein - Prom 38503 - 38562 2.2 41 24 Tu 1 . - CDS 38596 - 39525 968 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 39582 - 39641 4.9 + Prom 39530 - 39589 4.2 42 25 Tu 1 . + CDS 39620 - 40471 789 ## COG0583 Transcriptional regulator 43 26 Tu 1 . - CDS 40511 - 40690 157 ## - Term 41092 - 41132 2.0 44 27 Op 1 6/0.077 - CDS 41267 - 42286 779 ## COG3539 P pilus assembly protein, pilin FimA 45 27 Op 2 10/0.077 - CDS 42283 - 44820 1567 ## COG3188 P pilus assembly protein, porin PapC 46 27 Op 3 7/0.077 - CDS 44872 - 45612 469 ## COG3121 P pilus assembly protein, chaperone PapD 47 27 Op 4 . - CDS 45683 - 46219 553 ## COG3539 P pilus assembly protein, pilin FimA - Prom 46378 - 46437 12.1 + Prom 46465 - 46524 15.1 48 28 Op 1 . + CDS 46665 - 47015 299 ## ABSDF2135 hypothetical protein 49 28 Op 2 . + CDS 47079 - 47291 232 ## ACICU_01553 hypothetical protein + Term 47293 - 47337 5.2 - Term 47285 - 47323 3.6 50 29 Op 1 . - CDS 47338 - 48327 1264 ## COG0502 Biotin synthase and related enzymes - Prom 48360 - 48419 4.1 51 29 Op 2 . - CDS 48427 - 49515 988 ## COG1600 Uncharacterized Fe-S protein - Prom 49657 - 49716 5.4 + Prom 49410 - 49469 2.8 52 30 Tu 1 . + CDS 49526 - 51004 672 ## PROTEIN SUPPORTED gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 53 31 Tu 1 . - CDS 51016 - 51561 625 ## COG0817 Holliday junction resolvasome, endonuclease subunit + Prom 51697 - 51756 4.8 54 32 Op 1 1/0.462 + CDS 51791 - 52384 562 ## COG1396 Predicted transcriptional regulators 55 32 Op 2 . + CDS 52381 - 52926 558 ## COG1247 Sortase and related acyltransferases 56 33 Tu 1 . - CDS 52995 - 53819 737 ## COG2602 Beta-lactamase class D - Prom 53897 - 53956 6.6 + Prom 54133 - 54192 4.5 57 34 Tu 1 . + CDS 54218 - 54778 741 ## ABSDF2124 putative suppressor of F exclusion of phage T7 (FxsA) + Term 54790 - 54842 11.7 - Term 54771 - 54840 16.2 58 35 Tu 1 . - CDS 54842 - 55027 178 ## ACICU_01562 hypothetical protein - Prom 55051 - 55110 12.4 + Prom 55151 - 55210 5.0 59 36 Tu 1 . + CDS 55286 - 55534 233 ## ABBFA_001959 hypothetical protein + Term 55558 - 55595 0.8 - Term 55600 - 55655 4.1 60 37 Tu 1 . - CDS 55658 - 56824 1601 ## COG0192 S-adenosylmethionine synthetase - Prom 56987 - 57046 7.8 Predicted protein(s) >gi|333032607|gb|GL891819.1| GENE 1 167 - 1597 1521 476 aa, chain - ## HITS:1 COG:VC1977 KEGG:ns NR:ns ## COG: VC1977 COG0436 # Protein_GI_number: 15641979 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Vibrio cholerae # 75 472 2 399 404 595 68.0 1e-170 MSQKKSVLFQQLLPVIKQYQQSGFTHEKIVELLKDQHDLNLVTVKTFKSYLYRYAKVNPA MSKNTATLQSMPTSREIKKSSKLEHVCYDIRGPVLRAANEMEEQGHKIIKLNIGNPAPFG FEAPQEIINDVALNLPNAIGYVDSKGIFPARKAICQYYQQKGILNMHVNDVYIGNGVSEL IVMAMQGLLDDGDEMLIPMPDYPLWTAAVNLSGGTAIHYKCDEENSWYPDIADIESKITS NTRGIVIINPNNPTGSVYPRHVLEQIVALAKKHDLILFADEIYDKIVYDGIEHVAVASLA GDQLCISFNGLSKAYRIAGFRSGWMAITGDKSRAADYIEGLDMLASMRLCANVQAQYAIQ TALGGYQSINDLIRPGGRLYEQRNIAWEMLNEIPGVSCVKPEGAMYCFPRLDPNIYPIED DEKLMLDLLRAEKVLLVQGTGFNWPTPDHFRVVFLPAENELREAIGRLGRFLANRR >gi|333032607|gb|GL891819.1| GENE 2 1838 - 2257 317 139 aa, chain + ## HITS:1 COG:SMc00117 KEGG:ns NR:ns ## COG: SMc00117 COG0229 # Protein_GI_number: 15964744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Sinorhizobium meliloti # 1 128 24 151 153 168 57.0 3e-42 MGKVNKTDREWQRELSPEEYRITRQKGTEPAFTGQYWNTKQHGTYVCRCCGAELFSSDAK YDSGCGWPSFFRPLNGSVIDEHEDLTHGMVRTEIVCHDCEAHLGHVFEDGPQPTGLRYCV NSASLQLKTQEKNDEETYP >gi|333032607|gb|GL891819.1| GENE 3 2254 - 2739 596 161 aa, chain + ## HITS:1 COG:RSc2674 KEGG:ns NR:ns ## COG: RSc2674 COG0386 # Protein_GI_number: 17547393 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Ralstonia solanacearum # 1 160 1 160 165 212 60.0 2e-55 MSNIYQFEAELLEGDIKQFADYKGKVLLIVNTASKCGFTPQFAGLEKLYEKYKDQGLEVL GFPCNQFGGQDPGSNKEIGTFCQRNYGVKFPMFAKVDVKGPEAHVIFRYLTREAKGILGS STIKWNFTKFLVGKDGSVLNRYAPTTKPEALEADIEKALAS >gi|333032607|gb|GL891819.1| GENE 4 2739 - 3584 551 281 aa, chain + ## HITS:1 COG:AGc1998 KEGG:ns NR:ns ## COG: AGc1998 COG2207 # Protein_GI_number: 15888424 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 278 16 285 285 125 31.0 9e-29 MGSMNAIPQTFEFWQDRRMPYVETRRSCFGRTCYKSHSHPTFSIGAIDEGNSVFQSSFGT AQKISAGTLVIVPAHVEHSCNPMPNQAWSYQMLHLDLAWLNQLYSEFQEQGLDLHIPQHK PLIIKDESLYEAFTEMNETLFDAQKLIFEKEQSLLHCLIHLLLPHFILEEIQKPQYLYKD FLNLIDVISSSEGFISLEELAQRVGLSRYAIIRLFKANVGLTPHAFQINLKINQAREQLK QGVPLAELAVNLGFSDQSHFHKAFKAHTGVTPRQFQLAAAQ >gi|333032607|gb|GL891819.1| GENE 5 3649 - 4281 333 210 aa, chain + ## HITS:1 COG:PA5341 KEGG:ns NR:ns ## COG: PA5341 COG1280 # Protein_GI_number: 15600534 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 4 179 5 174 206 75 34.0 1e-13 MEVFLVIAFTHFLALLSPGPDFFLILTSLLQKGRRYTYGIVLGITLGNALILAGCLFSFI LLGNLSSILLLIFKWLGALYLAYLSFLCFNAARSTALNFSTDVNNLSDQAEDKHNKIKSL VLGLQSSLLNPKNIMFYSSLMLLIQNKFSLFQKLLMSVWMVGVVLIWNILLVKLLAHERI LVKIKRSATGLYYCSALAFILFAVLLITYK >gi|333032607|gb|GL891819.1| GENE 6 4339 - 5565 1220 408 aa, chain - ## HITS:1 COG:PA3659 KEGG:ns NR:ns ## COG: PA3659 COG0436 # Protein_GI_number: 15598855 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pseudomonas aeruginosa # 20 408 1 399 402 459 56.0 1e-129 MKHLIKFVSTETQLLGNCLMNSSLSLLHPYPFEKLNQLFKDITPANLPLIPLSIGEPKHP APEFVKQAIIDNFNHLSTYPNSKGLPELRQSIADWLTKRFKLNSISAENHILPVSGTREG IFSFVQALINREDAPYVVMPNPFYQIYEGAALLAGAKPYFINCTEENGYLGDFDAVPAEV WEKTALLFVCTPGNPTGTVLSKEQFKKLIALSDQYNFVIASDECYSELWFDQAPTGLLEV CAELGRDDYKNCIVFHSLSKRSNLPGMRSGFVAGDAALLKPYLQYRTYHGAAMPVQHQLA SIAAWNDESHVEENRKQYRAKFDLFQSELGHLLPLQKPDAGFYYWLKVDNDETFAKMLME KAHIKVLPGRYLSRDTEQGNPGANHVRMALVADLAQCEEVVKRLKAIL >gi|333032607|gb|GL891819.1| GENE 7 5534 - 8197 2620 887 aa, chain - ## HITS:1 COG:PA3658 KEGG:ns NR:ns ## COG: PA3658 COG2844 # Protein_GI_number: 15598854 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Pseudomonas aeruginosa # 18 883 30 887 900 765 44.0 0 MINTSPLLNYVSSHHDIKAINQWRTDVEKQLQDSYENGQSIREIIKARSDLVDEALVFLW KHAELDQSKLGLFAVGGYGRREMLPYSDVDIMILSEDEISEENEKRISTFISSLWDVGNF KPGISVRTIQSCVEQAATDLTVATTLIEARLITGNTQLAKWPRRIVSQTWTDKTFYDAKM AEQAKRYHQHNNTESNLEPDIKNAPGGIRDINQIGWIAKRHFRVNRIYDLVHLGFISEFE LAVLEEAESFLWEIRHHLHRLAKRDENRLLFDHQREIAAKFGYVRQEGQPVNYGVEQFMK RYYRTAQQVSTLNEMLLAYFSESVITPRLPNYERKIEVVNDHFKIVDNKLAVQHHKIFAE HPSAILELFYILANRPDIEGIRARTLRLLILAAKRINQSYRDNPEHQALFMSIIRSPYRL YDTLVAMKRYGVLGNYIPAFGQIMGLMQYDLFHIYTVDAHTLLLLRNLNRFREPEFAKEF PVVSSVFQRLARQDIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAW LIQNHLLMSLTAQKKDISDPDVVKDFAEKLGDMEHLDYLYTLTVADINATNPKLWNTWRA SLMRQLYTHARDVIRTGLGRPVDYQMLIEDTKFAASELLVNNFALADVEKVWQELGDEYF IKESADEIAWHTQAILKHGDNPEPLVLLRAHRKAAQDAVQIFIYTRDQPNLFATTVAVLD RMNLDVQDAKIITASTAFSLDTYVVLDRFGTLLTDPEREETVKNALVKALSQPDQYPGLM QRRIPRQLRHFDIENTVDVTLNEALQQNMVEISTLDHPGLLARVGGLFMMQGLDIHSARI ATLGERAEDIFFVTKKDGKPLNNEEVKLFSEKLKAALDEASNQICQH >gi|333032607|gb|GL891819.1| GENE 8 8225 - 9433 1469 402 aa, chain - ## HITS:1 COG:Cgl2702 KEGG:ns NR:ns ## COG: Cgl2702 COG0027 # Protein_GI_number: 19553952 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Corynebacterium glutamicum # 4 399 6 401 408 489 61.0 1e-138 MSVTLGTPLQSSAFKVLLLGSGELGKEVVISLQRLGVEVHAADRYDHAPAMQVAHFSYVL NMADPAQLKQLIEKVKPNLIVPEIEAIATEVLLEIEANKTATVIPSAKAVNLTMNREGIR RLAAEELGLPTSAYRFADTLESFRAACDDIGYPNFVKPVMSSSGKGQSRVKSFDEVDAAW EYAMQGGRVNQGTVIIESQIDFDFEITLLTVRAKNPETGEIETHYCDPIGHRQDAGDYVE SWQPQPMTPAALEEAKRIANKVTTALGGCGIFGVELFIKGDKVWFSEVSPRPHDTGLVTL ASQFQSEFELHARAILGLPVNTARHSVAASAVIYAGVDANNLSYSNLNVALAHPDTDLRL FGKPEGFKRRRMGVATARAENTDLARTLAKETADQVSVQTNF >gi|333032607|gb|GL891819.1| GENE 9 9545 - 9934 391 129 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01514 NR:ns ## KEGG: ACICU_01514 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 129 1 129 129 234 100.0 1e-60 MSQVKIYANERTIIQYRELLSHAIHQALIEELKYPVEKRFQRFISLKPENFIYPSDRSQH YIIIELSMFAGRSPATKKQLIQTLFRNIEEQCKIASQDIEITIFETPKENWGIRGKNADE LLLNYQVNI >gi|333032607|gb|GL891819.1| GENE 10 10063 - 10404 370 113 aa, chain - ## HITS:1 COG:no KEGG:ABSDF2171 NR:ns ## KEGG: ABSDF2171 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 113 8 120 120 170 100.0 2e-41 MNLEIILVGIIVGIANFASRFGPFFVIQKLQGNQQRRGSIWLKIALGSIGISAISAMLVV ATLPPLLETPNKSLAMLIGFLVLAGLYFKFKKIVPATLTAAIVYGLIYTYLPL >gi|333032607|gb|GL891819.1| GENE 11 10406 - 11128 669 240 aa, chain - ## HITS:1 COG:YPO3264 KEGG:ns NR:ns ## COG: YPO3264 COG1296 # Protein_GI_number: 16123421 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Yersinia pestis # 3 228 13 238 257 208 50.0 7e-54 MAAQTATFWQGAKDSQAIVLTYLPVSFAFGVSASQFGFSPWEAFFLSCSMYAGASQFLVV ALLASGSSIWLTALTVIALDIRHVLYGPALYNLIPTKLNLKKTAVWAWGLTDEVFASGMI QLSQRRQQWSESWMLGLSLFSWMSWASGSLLGGLFADQVAHLPKFLQAALDFLLPALFLS FLLAAFERKHSLVVAVSLVVSALACYWINLSAAIFIGILSGILAGLFKHYVLKQFDEVET >gi|333032607|gb|GL891819.1| GENE 12 11248 - 11718 518 156 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002008 NR:ns ## KEGG: ABBFA_002008 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 156 1 156 156 284 100.0 1e-75 MFKSKTRLVYIAILSASVFILQGCDNGNQSSDKKVEIKPAPKLTNDATVYAKKAWTLINT VDHLVYEKQLSQINDNVRKPLRQLSTDWRINVKMTDSVTEGKYALCRKALTSLDVWARET LENNSSVAQKQADYERDKQQCKEAIENPNLGNTSPK >gi|333032607|gb|GL891819.1| GENE 13 11791 - 12126 340 111 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002007 NR:ns ## KEGG: ABBFA_002007 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 111 1 111 111 126 98.0 3e-28 MKKLSTILTAGVLAMLSVSAFACPKGTQLQGGTGPNHKGGKCVAVHGKATAQKAKKEATK TKQEVKKDLTMQKHDAMTSATHAQHESHQMTHQMKQDAVKTANTAKAATKP >gi|333032607|gb|GL891819.1| GENE 14 12299 - 13006 647 235 aa, chain - ## HITS:1 COG:PA0275 KEGG:ns NR:ns ## COG: PA0275 COG0664 # Protein_GI_number: 15595472 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Pseudomonas aeruginosa # 10 228 7 223 228 150 40.0 2e-36 MDGLILDLIYINRLKENTWFSVLPEAFQKFILEYGKQITFEKNSYVFHAQDEFDGIYTVL EGSISLGYVDVNGNEALSAIAEPIMWFGEISLIDHEPRSHDAIALKKSTVLHIPAKPLNE LLKEHPYYWYYFARLTSQKLRYVFLEQIAIQTRSISQRLAQRLLFILEGYGNHILIQDHH IQISQEQLANMLTTSRQTINHELSLLEKQNIIKIAFRKIEILDIEKLKVIAQVHS >gi|333032607|gb|GL891819.1| GENE 15 13099 - 13620 563 173 aa, chain + ## HITS:1 COG:PA0276 KEGG:ns NR:ns ## COG: PA0276 COG4539 # Protein_GI_number: 15595473 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 162 1 159 171 133 46.0 1e-31 MSNLEQKLSQYAAYHLNHQNILTHFIGIPLIVFSILCLTARAGIDIGNFKVTLAMVLIAV STIYYLFLDKVFGLLMLIILVAVYPLASQIAQLSLGHWLAASIGFFVVGWAFQFVGHYFE KKKPAFVDDVIGLAIGPLFVLAEFIFMLGFRKPLHERILHEARSKREMMDLSH >gi|333032607|gb|GL891819.1| GENE 16 13665 - 14756 1511 363 aa, chain - ## HITS:1 COG:PA4673 KEGG:ns NR:ns ## COG: PA4673 COG0012 # Protein_GI_number: 15599868 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Pseudomonas aeruginosa # 1 363 1 366 366 556 75.0 1e-158 MGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNP QRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKID PLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARA ADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQI EAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTVKVGAT APQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFR FNV >gi|333032607|gb|GL891819.1| GENE 17 14850 - 15509 1051 219 aa, chain - ## HITS:1 COG:PA2351 KEGG:ns NR:ns ## COG: PA2351 COG2011 # Protein_GI_number: 15597547 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Pseudomonas aeruginosa # 5 217 4 216 217 241 69.0 1e-63 MQDQLIDLLITGTIDTLLMVGASAFIAFLIGLPIAVILVSTSEHGIHPSQKINQALGWVI NITRSVPFLILMVALIPLTRWIVGTSYGVWAAVVPLTIAAIPFFARIAEVSLREVDQGLI EAAQAMGCNRKQIIWHVLLPEALPGIVAGFTVTIVTMINSSAIAGAIGAGGLGDIAYRYG YQRFDMQIMLAVILVLIVLVMLVQATGDALAQQLDKRKV >gi|333032607|gb|GL891819.1| GENE 18 15490 - 16560 1166 356 aa, chain - ## HITS:1 COG:PA2350 KEGG:ns NR:ns ## COG: PA2350 COG1135 # Protein_GI_number: 15597546 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Pseudomonas aeruginosa # 11 355 25 369 369 314 50.0 2e-85 MVSFGSQVDFSLPHIKIRGLNKFYQSQGQKLHALKEINLDIPQGKILGIIGKSGAGKSSL LRTLNGLEQVNTGSIHIHQQNIAELSHSELIQTRQRIGMIFQHFNLMSAKTVWENVALPL KVSNYNKADIDQRVNEVLALVGLADKSNYYPSQLSGGQKQRVGIARALVHHPEILLCDEA TSALDPESTATILALLKKINQELGLTIVLITHEMQVIREICDQVVVIDQGEIVEAGQVWS VFSRPEQQITQELLNLEQITLPFKISRLPDEDSTHIIVKLKYEAEAHQVPDIQELLARFK APVNLYQSQVDTIQGHIIGSLLVGIPNVEIDLSSIQQDALTAIAQFEVLGYARPAH >gi|333032607|gb|GL891819.1| GENE 19 16572 - 17405 976 277 aa, chain - ## HITS:1 COG:PA2349 KEGG:ns NR:ns ## COG: PA2349 COG1464 # Protein_GI_number: 15597545 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 33 277 20 264 264 217 46.0 2e-56 MAIQFKQHKPWLLGITILIVVLGLVGYRYIKNKQADDVLTIGISPPYAELLQSVANEVEK QGVHVKLVEFSDWRAPNVAVQNGDIDANFFQQSVFLRNAVKETGYDLHAFGVGSGSHVGL YSKKYKSFEDLPLNARVAIPNDPVNLARALILLHRAGLIQLKDINNELSTTQDIIANPKQ LSFVEVEGPQTAHAYNDVDLIFGFPHYLKMAKVTDPHSALFLDPIDKKYAILFVTRRDYQ DKNQKLATFVKAFQNSKQAQDILDKDFGKGMWFQGWK >gi|333032607|gb|GL891819.1| GENE 20 17419 - 18249 940 276 aa, chain - ## HITS:1 COG:PA2349 KEGG:ns NR:ns ## COG: PA2349 COG1464 # Protein_GI_number: 15597545 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 19 276 8 264 264 277 55.0 1e-74 MAQTASKKWLGIGLVVVVLFVALFLWNKHRQSGSNELVIGISPPFAKPLQAAADEAKKQG LNVKLVEFSDWNTPNITLNHGDIDANFFQHQPFLDNAIKETGFKLKAFAVGAASHVGLYS KKYKSLDELPQNARVVIPNDPVNQGRALLLLQQAKLITLKDSNNHLSALKDVVSNPKNLQ FIEVEGPQTARAIDDVDLAFGYPHYLRLAKTADPNSALLLDDNTNKRYAILFVVRDDYED KGDKLKKFVEIYQNSPKVKAVLDAEIGPKLWFPGWK >gi|333032607|gb|GL891819.1| GENE 21 18264 - 19676 1403 470 aa, chain - ## HITS:1 COG:PA2348 KEGG:ns NR:ns ## COG: PA2348 COG2141 # Protein_GI_number: 15597544 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 7 455 4 455 462 533 57.0 1e-151 MADFKAKEILLNAFDMNCVGHINHGLWTHPRDESHRFNELSYWTEQAKTLENGLFDGLFI ADITGVYDVYQNGIDLTLKESIQLPSHDPSTLISAMAAVTQNLSFGVTVNLSYEHPYQFA RRFASLDHLTQGRIGWNIVTGYLDSAERLIGQKGLKDHDARYEQAEEFLELCYKYWEGSW ENDAVKKDKARRVFTDPSKVHTIHHHGKYYQSEGVFQVSPSVQRTPTLFQAGASPKGMQF ATRHAECVFIGGDKPEKIREQVKKIRTLAEQQGRSANDIKVFVGITVVVAETHDLAVQKL NEYRQYASPEAGLAHYASSTGIDLSKFADDEAIPYQKSNSIVSITEKFKEQQITKNDLKA QHVLGGRYPLIVGSGEEVAEYLIHLLDETDIDGFNLTRTVAPESHHDFIRLVIPELQQRG RYKTAYKTGSLRNKIFNRGDHLPEQHPVQAFRCSPYNNSKNLTKIEEITA >gi|333032607|gb|GL891819.1| GENE 22 19676 - 20899 1424 407 aa, chain - ## HITS:1 COG:PA2347 KEGG:ns NR:ns ## COG: PA2347 COG1960 # Protein_GI_number: 15597543 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 15 407 12 405 405 441 56.0 1e-123 MTSYQSVQTKQTSASGQAHIIQNDAEALEIAKQFAEQFKKTAVERDAKRILPYTEIDALS QSGLWAITVPKQYGGAEVSSHTVAQVIALLSGADGSIGQIPQNHFYALEVLRNTGTETQK QRLYGEVLNGTRFGNALAEFKTKTSTHKQTNIRPHENGYLIQGEKFYCTGSLFAHRIPTL VLDDAGREYLAFVKSGSQGLKLVDDWSGFGQKTTGSGTVKFDQVFVDADDVIPFDTAFLQ PTLVGPFAQIMHASIEVGIARAAFEESLQRVHQARPWIDSNVETANQDPLTIYELGRIAV DVRASEVLLKQAAQSIDAAKIETSPESIAKASIDVAKVRAHSTDIALKASSKLIELAGSR GSQSQDGLDRFWRNARVHTLHDAARWKYYFIGNYVLNGVLPPRRGTL >gi|333032607|gb|GL891819.1| GENE 23 20912 - 22147 1384 411 aa, chain - ## HITS:1 COG:PA2346 KEGG:ns NR:ns ## COG: PA2346 COG1960 # Protein_GI_number: 15597542 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 21 411 21 411 411 385 51.0 1e-106 MTAIQGVIMSNSLSKTTAYVQVIQNDQQAINAAYQVADFALEGRNTRDQQRLLPQEQIES FSQKGLGGIRIAKKYGGAFVSNKTLAQVFRILSKGDANVGQIPQNQISLLNLIEIMGTEQ QKQFIFSEILAGKRLANGGPERNTHDSKTLKTTLTIENGKYILNGEKFYSTGTSFAHWLA IKAIHPEGHVVLVIVNRDAQGIEVINDWNGFGQRTTASGTVKLNRVEVNPELIFDERLLT QVPTYRGAYSQLLQVAIDVGIAEAAFEDTLSTIHKARPIIDANVEKASFEHYTLQEVGKL NILLDAAILLLDEAAEYLDELDQLQTVTDEQVAKASILVAEAKVYANDAALQISEKLLEL GGSRSSLSQHNLDQHWRNARVHTLHDPVRWKLHAIGNYYLNGHFPARHAWI >gi|333032607|gb|GL891819.1| GENE 24 22493 - 23257 740 254 aa, chain + ## HITS:1 COG:sll1545 KEGG:ns NR:ns ## COG: sll1545 COG0625 # Protein_GI_number: 16332243 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Synechocystis # 1 206 1 205 271 91 33.0 1e-18 MRVLYQFPLSHYCEKARWLLDHKELDYVAHNLIPGFHRAFAQLKTGQNLLPILKDDHRWI AESTKIALYLDDTYPEHALLRRDEQLRQQTLKIDSLADELGVHVRRWALAHTLAQGDHAL EIMMGEQGYLRQFEKISKPFLKTLVKKNYKLEEELVSQSKGCMDELINELNHYLIENQAR YMVGDRLSLADISVCSMLAPLLEIKGTPWEREEDGEVSPDWSNYQKYLLDLPLGQYVLRI YQTERNARVDWRGI >gi|333032607|gb|GL891819.1| GENE 25 23795 - 24688 978 297 aa, chain + ## HITS:1 COG:RSc2261 KEGG:ns NR:ns ## COG: RSc2261 COG0834 # Protein_GI_number: 17546980 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Ralstonia solanacearum # 22 297 29 307 308 237 46.0 2e-62 MKRSATSLIVSTVMLCTVGATSQIQAADTLAKIKSTGKIVIGHRESSDPISYVVAGKPVG YAVDICNQFANDIKKELKMPGLKVEYKAVTSSTRIPELLAGNIDMECGTTTNSKQRQQQV GFSTNYYATEVRMAVKANSGIKSLADLNGKAVVTTQGTTSDKYIKMNEKGQAINVQNIYG KDHADSFAMMASGRAAAFVMDDNILAGLIAKSSTPKAFAIVGPVLSSEPYGIMIAKDDPK FKAIADRTVNNLWKTGQMDALYKKWFLSPIPPKNTNLNMQQSSSYKKLKAHPTDAGI >gi|333032607|gb|GL891819.1| GENE 26 24783 - 25625 777 280 aa, chain + ## HITS:1 COG:RSc0482 KEGG:ns NR:ns ## COG: RSc0482 COG0765 # Protein_GI_number: 17545201 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Ralstonia solanacearum # 38 278 11 241 242 179 42.0 4e-45 MSVGSLNWTIFCAESNEYGVDKAAWAESVCKVIGSSSYNAYAEAPTWLQMLGSGVFTMVW TAIVAFLIAFLLGSLLGVIRTLPNKPLAFIGNCYVEIFRNIPLIVQLFFWAFVFPEFLPD SLSAGSGDVVAGGWWKNILNQQPAVIGVFALGLYTAARVSEHVRAGINTVSRGQKFAASA MGFTTAQSYRYVILPVAYRTVWPTITSEAMNVFKNSAVLYALSVLNFFAYTKTMREETSQ DIIILILSTPVYLIITYTIKFIMAWIEKRMAVPGLGSGGK >gi|333032607|gb|GL891819.1| GENE 27 25628 - 26305 704 225 aa, chain + ## HITS:1 COG:PA1340 KEGG:ns NR:ns ## COG: PA1340 COG0765 # Protein_GI_number: 15596537 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Pseudomonas aeruginosa # 1 223 2 222 222 178 49.0 6e-45 MDFSLLHNPDVIAALKEGFIFTLTVTVLAMMGGILIGTPLAMMRLSNNALASNFAKFYVD LFRGIPLIQVIFIFYFLLPKIFEFQSDTYWGPLFSSVVTFAIFEAAFFSEIVRSGIQSIS KGQVNAGYALGFTYGQSMRYVVLPQAFRNMLPVLLTQTIILFQDVSLVYVISAPDFLGRA DTLANTYGPETKATFYLIVAVVYFCSSFVLSQLVKRLQKKIAIIR >gi|333032607|gb|GL891819.1| GENE 28 26319 - 27062 494 247 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 243 1 242 245 194 42 7e-49 MPMIDIQHISKWYGDFQVLTDCTTSIEKGDVVVVCGPSGSGKSTLIKTVNALEPFQQGDI IVDGVSLKDPKTDLAKFRSRVGMVFQHFELFPHMTVLENLTIAQVKVLKRSVAEAREKGL KYLERVGLLAHKDKFPGQLSGGQQQRVAIARGLSMDPICMLFDEPTSALDPEMVGEVLEV MVQLAHEGMTMMCVTHEMGFAKRVSNRLIFMDEGKILEDCPTHEFFDNLEARHERAKIFL EKIQAMH >gi|333032607|gb|GL891819.1| GENE 29 27114 - 28445 1458 443 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01534 NR:ns ## KEGG: ACICU_01534 # Name: not_defined # Def: putative DcaP-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 443 1 443 443 850 100.0 0 MWGMPVKNIKTLILAMSTISLTAVVMPAHAATDAEVDALRKEVSELKQLVQQLSNQQKAV TVVNTPKVPSTTIAASSPVPQSKPGWMQMPDGQTQVKLYGNVRVDATYDFKGSNGSISNG ANYPLNKDDPRQDSLNVSAATTRIGLDLTRPTQYGDLTGKIEADFMGGNGDNGSGTFRVR HAYMSLGKWLAGQTTSPFVNTDTSPETLDFTGAVGTGTTRTVQVRYTQPINAQQKILVAL EGGDVEKVSNAAGGSRFPALTTRYDFKTADNKGLLQLHGLAHENRVAPKNSSSEEKFGWG VGIGGKYDITPQDSVVANYYHVKGDGRYLSYSNSAYAYDTTTQDINLGEFDSAVIGYQRK WSPILRSTFAIGGIQYKDDNVYANSNLTNTSYNKEIYNALVNLIWNPVKNIDLGAEYTYG QRETFAGDKGDYSRINLLAKYNF >gi|333032607|gb|GL891819.1| GENE 30 28776 - 29246 404 156 aa, chain + ## HITS:1 COG:PA3965 KEGG:ns NR:ns ## COG: PA3965 COG1522 # Protein_GI_number: 15599160 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 2 143 13 155 169 82 35.0 2e-16 MELDRFDKQILEILSHEDLNLNELSERINLSVSSVHRRIKHLIEANIMGQLKREINFSKL GFTLHILLQVSLSKHDSETFDKFLSEIEAIPEVTNAFLVTGQSADFILELVARNMDDYSE ILLRRIGKIDNVVALHSSFVIKEYNVFNCYNLLNKV >gi|333032607|gb|GL891819.1| GENE 31 29277 - 30026 1030 249 aa, chain - ## HITS:1 COG:yebC KEGG:ns NR:ns ## COG: yebC COG0217 # Protein_GI_number: 16129817 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 247 1 246 246 283 64.0 2e-76 MAGHSKWANIKHRKAKQDASRGKVFTKYIREIVTAAKLGGADPASNPRLRAVVEKALSVN MTRDTINRAIQRGVGGEDNDDLKEVTYEGYGVGGVAVLVETMTDNLNRTVPDVRHCFSKT NGNLGTAGSVAYLFTKRGEITFDDVSLEDKIMDVALEAGAEDIEVSEDEILVITSPETFG EVQDALAAAGLKSDNAEVVMSPSTKAEITDIDQAKQVMKLIDMLEDLDDVQNVYTNVEFS DEVLAQLDA >gi|333032607|gb|GL891819.1| GENE 32 30189 - 30734 617 181 aa, chain - ## HITS:1 COG:CC1900 KEGG:ns NR:ns ## COG: CC1900 COG0204 # Protein_GI_number: 16126143 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Caulobacter vibrioides # 10 171 16 173 196 109 40.0 3e-24 MKKFLGNSIFKAVGWTYDADPTILEKKQVIIGFEHTSNLDAILSIALFQILDLKIHTLIK KELFKGPMKPILEKLGGIPVDRKASKDIVSQMVEKFQSSDTFNLVIAPEATRAKDGSERK PIRTGFWHIAKAANVPIVLMYANARTKKGGILGKIYPTDLQKDLETIKELYAQYDIDVKI N >gi|333032607|gb|GL891819.1| GENE 33 30920 - 31480 461 186 aa, chain - ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 138 9 142 193 97 36.0 9e-21 MSKKEDIINTALELFNQIGYNATGVDKIIADSNVAKMTFYKYFPSKESLIMECLHHRNIN IQNSIYEKLSLHPDVSPIDKIHLIFNWYIDWVNSENFNGCLFKKAFIEVSKQYTSIREPF QEYTNWLINLLNSLLVELDIKDPTPLTHIIISIIDGIIIDGTIDKDLIDPSKKWQYIEYL IKTENP >gi|333032607|gb|GL891819.1| GENE 34 31755 - 32618 687 287 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01539 NR:ns ## KEGG: ACICU_01539 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 287 1 287 287 575 100.0 1e-163 MPKKFEDFNNPRKKALAGMKQSISAELWDKNLNFLTQLRAKIAKHPVSHHPAIETLNNGE INKENLKRIHLEYRHAIVQTFTDALLMAQYQTKQLEPRLHAGAKMFPRCLLSLNIFDEFG FRPGTDKDGYYQGNPEYAHYPLFEDVLDDFGVTEEERRSYQPTEIAHQLREFLENSYKDY KAVSALLAVAEEEVILYSPPLRKATSAVGIAVEGGGYYHVHGVSEDETAEAADDDHEEDL WFILMQACTEEDYTYLENLCLEYCDLWEKFWDVQIESSKSILKQNLA >gi|333032607|gb|GL891819.1| GENE 35 33050 - 34282 762 410 aa, chain + ## HITS:1 COG:XF0631 KEGG:ns NR:ns ## COG: XF0631 COG0582 # Protein_GI_number: 15837233 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Xylella fastidiosa 9a5c # 7 348 3 346 413 115 26.0 2e-25 MSTSRVKLTKSFIDQLELTPAIYRDSEIIGFAIRVNNSYKTYIVEKKVKGKSIRCKLGDY EKITLEDARILAQQKLKELTDSNSLSIKNNKILKNSLNEKIDQPYLKEAFQVYINHHELK ERTLADYKEVIEKYLIDLSELKLIDITEQMIEEKYIQLSQYSYAKANLSMRVLRAVYHFS IKYYQNKNCEVIIPRINPVNLLKKKQLWEEIPPRRNYIDVDNLTKWVQAIIEYKGRGQEN ETNKDFLLTLILTGLFRNECESLHWKNIDLEEGTLSFINPYNNVYYKIYMGNFLWYLMKK RRIQNKGEWVFPSVKSESGHIINISKFRKKINEQCNLSFTFQDLRRTFYFLLNNLTNKSL VSKRTDQYEEKLDVKNIAHAQDMRNRMNKVEQIILGPYRDELIKSININL >gi|333032607|gb|GL891819.1| GENE 36 34738 - 34836 109 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFKAMFFFSAGAMFGYCYKHYDEKVIESNKSK >gi|333032607|gb|GL891819.1| GENE 37 34867 - 35766 764 299 aa, chain - ## HITS:1 COG:PA2758 KEGG:ns NR:ns ## COG: PA2758 COG0583 # Protein_GI_number: 15597954 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 1 290 295 319 55.0 4e-87 MNFNSENIELFLTVLDTGSFSAAARKLNRVPSAVSMAIANIEAELGYHLFERTHRKVIPT AAALALEPQARIIAEQLRLLATHAYELSLGLESKLKIGVVSDANTELLFKAIKQLAEKFP LLNLEIITAPQDDILNLLYTENISLCLAGSNLNIKMRESLQLVMTETVIATISAHHPFLK EQNKLNTIEELINIRQIVVASSELDMEDSRSIIGAMYWKTNSLQTAINMVEAGLGWGNFP LSLVKEKIEQGHLVQLDFKNTKNHLPLSIYLIWLQDKPLSKAARELVQIVQANLSQTCH >gi|333032607|gb|GL891819.1| GENE 38 35856 - 36293 452 145 aa, chain + ## HITS:1 COG:PA2757 KEGG:ns NR:ns ## COG: PA2757 COG4125 # Protein_GI_number: 15597953 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 141 1 141 147 191 67.0 3e-49 MQGLKRRIVYVSSYEIIGMVISSVGLALLAGDSVEHTGPLSVMITTIAVTWNFIYNILYE KWEARQESKSRTVKRRIAHAIGFQITLVMFLIPLIAWWMNISLVAAFWLDVAFIIIIPIY TFIFNWTFDKLFGLPASAQPSTAQQ >gi|333032607|gb|GL891819.1| GENE 39 36351 - 37766 955 471 aa, chain - ## HITS:1 COG:PA5099 KEGG:ns NR:ns ## COG: PA5099 COG1457 # Protein_GI_number: 15600292 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Pseudomonas aeruginosa # 4 464 2 462 480 556 63.0 1e-158 MDSSAGKPKSGFVENRSIDFIPENERHGSIFAQFTLWFGANLQITAIVTGALAVVLGGDV FWSIIGLFIGQCFGAAVMALHAAQGPKLGLPQMISSRVQFGVYGACIPIILVCLMYIGFT ATGEVLAGKAIAHLAQVSNTTGILIYACFIIIFATIGYRLIHWVGKVASVIGLIAFVIIL TQILALSNISELLAVRHFSWSSFLLAVSLSASWQISFGPYVADYSRYLPTKTSSTRVFWA VGLGSLIGSQISMMLGVFIAQVSNGGFVGNEVQYVVGMNPIALVITFLYFSIAFGKVTLS TLNAYGSFMCIATIWNSFKPSAQISKLTRLTIVLAMVIISTFIAVVGEHTFLSAFKSFIL FLLTFFIPWSAINLVDYYFISKEECDVNALYDPNGKYGRWNTIGIACYCIGILLQLPFID SKFYKGQIAEMLGGVDLSWLVGLLSTAVLYYVLAKRAQIKISKALQLERVK >gi|333032607|gb|GL891819.1| GENE 40 38019 - 38483 390 154 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01544 NR:ns ## KEGG: ACICU_01544 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 154 1 154 154 270 100.0 1e-71 MNLDFTTIEKQAKLLKEEQEKLEQQDHDFQLALDKHRESLKNLFKELFHDREIKTENGGQ FCVVFGDFKISLLIETAKFENGVPVKLNSVNPIIVKFKKDKPVAKAQFSDATQYLDSGFE TPHYQYYYKHADKTQLVQFSELPVFFQAILDAEV >gi|333032607|gb|GL891819.1| GENE 41 38596 - 39525 968 309 aa, chain - ## HITS:1 COG:BS_yyaM KEGG:ns NR:ns ## COG: BS_yyaM COG0697 # Protein_GI_number: 16081133 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 17 299 15 296 305 183 39.0 4e-46 MNKSMVYAYTGVVITMLFWGSAFNAMSYVIQYMPPLSAAAERFTIASLGLFILFTAIGKL HWVALRQNLAIYLIIGIIGIAGFNLGCFYGLQTTSAVNGALIMATTPLITLLLTILLDGE KLTLNKSIGVVFGLSGVLFVISHGHISTLLHLKIAIGDLFILLGGVSFCLANVLSRRYVK NATPLETTTFSMMFGALTLIILSVIFEHPSQAIAMAPITAHLAMGYVIICSTMIAYLFWF NGIQKLGAGRASIFFNFVPVFSMLVALLAGQSLNIWQLIGTALVMLGVMSSGGFIQIKRP ALIAKPCTK >gi|333032607|gb|GL891819.1| GENE 42 39620 - 40471 789 283 aa, chain + ## HITS:1 COG:RSp0018 KEGG:ns NR:ns ## COG: RSp0018 COG0583 # Protein_GI_number: 17548239 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 2 282 14 296 302 168 38.0 9e-42 MIDWENLHYFSVFSEEKTLSAAARKLGVDHATVARRIAQLEDNLKLKLVDRRPRTYILTS EGERLAKIVTRMMEETFSIERLAQAGQQEISGVVSVSLPPATAAHLVMPHLGKFYRQYPE LQLRILGDVHYASLQHREADIAVRFGRPKDDYLIARKAGEVPFGIYAAQEYLDAIQEENY GWISVEVGGVQGQKQQKLKQRLNYKEPVMVTNHPELQWRATCGAVGLAVLPDFLGQQGHL VKLPDDDPMSAEIWLVIHEDLRSSPAVRVVMDFLLDCFEPFRV >gi|333032607|gb|GL891819.1| GENE 43 40511 - 40690 157 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLIIWKIFCILLLSLGAFGIGLGISYLDFFLFFIGLLFLLCFFLALKQAREDAGSFPDE >gi|333032607|gb|GL891819.1| GENE 44 41267 - 42286 779 339 aa, chain - ## HITS:1 COG:XF0077 KEGG:ns NR:ns ## COG: XF0077 COG3539 # Protein_GI_number: 15836682 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 23 338 42 355 356 147 31.0 3e-35 MKKMLIKSGLLITSFFIYNQTYANCTLSKGFTTVDIPMTIGTIVVRPTDPIGTVLQKNTF TISPNNSTATCNRASDQITAALPLNYPVSSIGNNVYATNIPGIGIRLYREAFDSTDFSGY YPYKRSLTPNTTYTLSPGYFVMEVIKTAATTGSGALVAGRYSTYYVTGQQNRPFLTTTVL SSSPILIASSSCEIQNGIDTVVQLPTVMKSGFRAIGSTQGEKNFNLSILCNGGENNSGVP TSNTLSLSFDYISDTSNSQVINNSAADSTKANGVGVELLWNMNGANNPIRKGNKLDIGTV SSNQTVQYDIPLTARYYQTASNVTAGEVKANATVTIQYD >gi|333032607|gb|GL891819.1| GENE 45 42283 - 44820 1567 845 aa, chain - ## HITS:1 COG:XF0081 KEGG:ns NR:ns ## COG: XF0081 COG3188 # Protein_GI_number: 15836686 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Xylella fastidiosa 9a5c # 29 845 83 901 901 664 41.0 0 MSEWFISSICFKKRTTYYLVLSLAINIPLTVYASDNMNRENILKADFDTNFLVGNAQKID IGRFKYGNPILPGEYSLDVYINGQWLGKRKFVFKSTRSNENAKTCFTPDMLLEYGVKPEI LHHEVSSTFTCNDLDKWVNDAFYQFDTSRLRLDISIPQVALQKNAQGYVDPRLWDRGINA AFFAYNASAYRIVNNNHETNHAFMGTNVGLNLYDWQLRHTGQWKWQDHNEIQEKVSSYTS NNTYAQKAFPKLNSVVTLGDYFTNNNFFDALPYRGINISSDDRMLPNSMLGYAPQIRGYA KTNAKVEVRQQGNLIYQTTVTPGSFEINDLYPTGFGGELQVSIYETNGEIQKFSIPYASV VEMLRPKMSRYSFTLGQFRDANINLKPWLVQGKYQRGINNYLTSYTGFQATENYQSFLIG SAFATPIGAISFDATQSSAEFEQKPTLKGRSYRLSFNRLFTPTNTNLTLATYRYSTENYL KLRDSILIRDLQQQDIDSFSVGKQKSEFQITLNQGLPNQWGNFYLVGSWINYWNQPNRNQ QFQFGYSNQFKDLTYSISAITHEFDQENQNSGHETQYLLSLSFPLQFKKNTVNFNSSISE DSRTLGMSGYIGNRFDYGSSISYQDQGQTSLNINGTYRTNYTTIGASFGQSDTYQQEMIN LNGSLVAHSQGILFGPDQVQTMVLVYAPQATGARVGNISGLSINKQGYAVIPYVTPYRLN DISLDPQGMPSTVELTETSHRIAPYAGSITKVNFSTKTGYAVFISTQTPNGGHLPFAAQV FNQNNEIVGMVAQGSRIYLRTPLTQDHLYVKWGQSNSEECQLDYDIQSKILQEKQLIIMT EAVCK >gi|333032607|gb|GL891819.1| GENE 46 44872 - 45612 469 246 aa, chain - ## HITS:1 COG:XF0082 KEGG:ns NR:ns ## COG: XF0082 COG3121 # Protein_GI_number: 15836687 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Xylella fastidiosa 9a5c # 7 238 12 254 266 189 41.0 3e-48 MLFRGRKFFWGMACLQALIATTGHAEIVLHGTRVIYPSDAREVNLQLSNNGTAPSLVQAW IDDGNAKSTPDEANVPFIITPPISRVEPSKGQTLRITALPNASQLNQNKESVFWLNVLDI PPRPEGKKQENNEVLTNNFLQLAIRSRIKFFYRPVSLKENINTLSEKIQWVKNGENLLIK NPTPFYITISSIFQEINHQKTDLLKQGLMLSPFSEDQIKLKNSNITNMSFVYINDYGGRI EQVIRF >gi|333032607|gb|GL891819.1| GENE 47 45683 - 46219 553 178 aa, chain - ## HITS:1 COG:XF0083 KEGG:ns NR:ns ## COG: XF0083 COG3539 # Protein_GI_number: 15836688 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 1 178 4 184 184 170 58.0 2e-42 MKKFIFIAASSLFNIAAAQAADGTITINGLVTDNTCTIDTGDKNLTVNLPTVSSQSLKNA GDVAGRTPFQINLTNCASVGKVATYFEPGATVDFNTGRLLNQATSGAAANVNIQLLGSNN AVIPVIAKGASGAQDNSQWVNVSAGGNADLNYYAEYYATGASTAGTVTSQVKYTIIYQ >gi|333032607|gb|GL891819.1| GENE 48 46665 - 47015 299 116 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2135 NR:ns ## KEGG: ABSDF2135 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 116 18 133 133 204 100.0 9e-52 MNNMKYTYKPNYFFFAHKLVLFLKDYLLKHPTEQNTTFNLQTIYDVFSHDLASSTTNLEG ILNIADEYVLETEEGLLPLISSHSINLKNHVLSLEFSPKALTSLLSGRSLVNPKAA >gi|333032607|gb|GL891819.1| GENE 49 47079 - 47291 232 70 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01553 NR:ns ## KEGG: ACICU_01553 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 70 1 70 70 123 100.0 3e-27 MSKDFKALTYIADDNIADTVTWLLHHQDVFESFHFDVLSQELSVTHAAGRDIIRVGTFLN ATYGILVTSV >gi|333032607|gb|GL891819.1| GENE 50 47338 - 48327 1264 329 aa, chain - ## HITS:1 COG:STM0794 KEGG:ns NR:ns ## COG: STM0794 COG0502 # Protein_GI_number: 16764157 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Salmonella typhimurium LT2 # 7 321 7 321 346 434 63.0 1e-121 MTLRNDWTREEIQALYEQPFLDLVFKAQQVHREHFTANTIQVSTLLSIKTGKCPEDCKYC SQSAHYDSKLEAEKRIAVEKVISEAKAAKDSGSSRFCMGAAWRNPHERDMPYVLEMVREV KALGMETCMTLGMLNQSQAERLKDAGLDYYNHNLDTSREYYSHIISTRTFDDRLNTLDYV RQAGMKVCSGGIVGLGESREDRIGLLHELATLPIHPESVPINMLVPIEGTPLADVEKLDV IEWIRTIAVARIIMPHSYIRLSAGRESLSDSDQALAFMAGANSLFSGDKLLTTPNAGEGK DQALFNKLGLTAEKPKPTVSDLSVDAMSA >gi|333032607|gb|GL891819.1| GENE 51 48427 - 49515 988 362 aa, chain - ## HITS:1 COG:PA4950 KEGG:ns NR:ns ## COG: PA4950 COG1600 # Protein_GI_number: 15600143 # Func_class: C Energy production and conversion # Function: Uncharacterized Fe-S protein # Organism: Pseudomonas aeruginosa # 15 358 14 358 361 367 50.0 1e-101 MTSSNTSRIAVQQIDPHELKAWIKAQALDLGFADCVIAKPDAQEQMPRFLEYLERGYHAD MTYLEENLEKRADPTLLVPGTKSIICVRMNYLVESPKPRYVPFEPNSAIIARYARGRDYH KVMRGRLKTLATRIREKVGDFESRPFADSAPIFEKSLAESAGMGWTGKHTLLIHKKSGSF FVLGELFTSLDLPFDEPATSHCGSCSACIDICPTQAIVEPYMLDARRCIAYLTIEYKGII AEELRAGIGNRIFGCDDCQLICPWNSFAKTASIPDFNPRHGLDNISLLDIWQWDEATFLA NTEGSPIRRTGYQSFKRNIAIGLGNAPYSKEIVDQLNKGKSLHDEIVNVHIDWAIEQQLN QL >gi|333032607|gb|GL891819.1| GENE 52 49526 - 51004 672 492 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 [Vibrio harveyi HY01] # 4 491 2 507 512 263 36 2e-69 MQEDKNMQAVVYHSQDIQAWEQRWFAAQNSSLGLMQQAAWSITQQLIVLFQKQNFKNIAV WCGQGNNAGDGYFIASYLKQAGFQVGIFAAELGESADLHHAVHFAKENHVQIHQGFEING TFDCHIDALFGIGLNRELNGYWQHAIQQFNGQAGLKISIDIPSGLHANTGSTLPCAIRAD HTFTVLGLKAGLFTGQGKEYAGQIHLINLIPIDQELKPLAYLTPTHINFPKRLAFGHKGS YGHVLVIGGHEQMGGAVIMAAEAAFHAGAGKVTVVCHRNHHQAILSRAPNIMLRDINDFD ENGIKEILSQVDAVCFGMGLGRDEWALQIYQQWFNYLNQTSHLEVVLDADALWFLAKQPE KLSLHIYATPHPGEAATLLSCSTWQIENDRIAAIYALQQKYAGQWVLKGAGSLILEDNLY ICTQGNAGMGTGGMGDVLAGMIASLKAQFHKAVTLHEIVTLHAQAGDQLAKQGMRGLQAY EMNQAITQVVNQ >gi|333032607|gb|GL891819.1| GENE 53 51016 - 51561 625 181 aa, chain - ## HITS:1 COG:PA0965 KEGG:ns NR:ns ## COG: PA0965 COG0817 # Protein_GI_number: 15596162 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Pseudomonas aeruginosa # 1 157 1 157 174 173 58.0 1e-43 MPLIIGIDPGSRLTGYGIIEKDGSKLRFVDAGTIRTETQEMPERLKRIFAGVERIVKFHG PTEAAVEQVFMAQNPDSALKLGQARGAAIAALVNLDLQVAEYTARQIKQSVVGYGAADKE QVQMMVMRLLNLTIKPQADAADALAAAICHAHASGSMSKLTVLNALGGMARGRSRSSSRR R >gi|333032607|gb|GL891819.1| GENE 54 51791 - 52384 562 197 aa, chain + ## HITS:1 COG:RSc3132 KEGG:ns NR:ns ## COG: RSc3132 COG1396 # Protein_GI_number: 17547851 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 4 187 16 199 209 215 55.0 3e-56 MDDINIRIAHRIRELRLARGYTLDVLAARCQVSRSAISLIERGETSPTAVVLEKLANGLE VPLTQIFTNEAGNSSSQPLIRRNEQAEWRDPETGYIRRTVSPPNLKLPFQIVEIEFPPHS RITYETNESSRVVQQQLWVVEGKIEIQLGETSYALGQGDCLAMQLDQPVIYSNHSAQVAR YILVVSNQLVPALKESL >gi|333032607|gb|GL891819.1| GENE 55 52381 - 52926 558 181 aa, chain + ## HITS:1 COG:RSc3133 KEGG:ns NR:ns ## COG: RSc3133 COG1247 # Protein_GI_number: 17547852 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Ralstonia solanacearum # 8 181 9 182 182 275 71.0 3e-74 MNYSLDSNFRLIDCNEAEHAVAILEILNDAIVNSTALYDYVPRSLDSMKTWFSVKRENGF PVIGVVDELGKLLGFASWGTFRAFPAYKYTVEHSIYIHHEHRGCGLSKVLMQALIQRAQQ AQLHVLIGCIDATNQASIGLHEKMGFTHAGTFKQVGFKFGQWLDAAFYQLILNTPFEPVD G >gi|333032607|gb|GL891819.1| GENE 56 52995 - 53819 737 274 aa, chain - ## HITS:1 COG:PA5514 KEGG:ns NR:ns ## COG: PA5514 COG2602 # Protein_GI_number: 15600707 # Func_class: V Defense mechanisms # Function: Beta-lactamase class D # Organism: Pseudomonas aeruginosa # 29 274 15 261 262 205 43.0 7e-53 MNIKALLLITSAIFISACSPYIVTANPNHSASKSDVKAEKIKNLFNEAHTTGVLVIQQGQ TQQSYGNDLARASTEYVPASTFKMLNALIGLEHHKATTTEVFKWDGKKRLFPEWEKDMTL GDAMKASAIPVYQDLARRIGLELMSKEVKRVGYGNADIGTQVDNFWLVGPLKITPQQEAQ FAYKLANKTLPFSQKVQDEVQSMLFIEEKNGNKIYAKSGWGWDVNPQVGWLTGWVVQPQG NIVAFSLNLEMKKGIPSSVRKEITYKSLEQLGIL >gi|333032607|gb|GL891819.1| GENE 57 54218 - 54778 741 186 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2124 NR:ns ## KEGG: ABSDF2124 # Name: not_defined # Def: putative suppressor of F exclusion of phage T7 (FxsA) # Organism: A.baumannii_SDF # Pathway: not_defined # 1 186 1 186 186 292 100.0 5e-78 MNLLLIVVLGAIVEIAVWIGVAQFISGWYVFFWFIIAFFIGLTLIRNSTAGIMPQLQQMQ MTGQLGNDPTVTKKLAYAFAGFLLMLPGLVSDVLALLILIPGVQTAFRNIAMRTLAKRQQ AMMNKMMGGMGGAGAGQNPFADLMRQMQDMQNQQGGGSQYHDSSIIDGEAREVTPDHKKI EHKNKD >gi|333032607|gb|GL891819.1| GENE 58 54842 - 55027 178 61 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01562 NR:ns ## KEGG: ACICU_01562 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 61 1 61 61 68 100.0 9e-11 MTQLINKGGFRERANRSQKYQQSENKQVALPSNKYQPQTKLQDNQNEMIQAKAVISETSD D >gi|333032607|gb|GL891819.1| GENE 59 55286 - 55534 233 82 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001959 NR:ns ## KEGG: ABBFA_001959 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 82 1 82 82 138 100.0 9e-32 MLYQYHCACCDKVVASTDKSCPYCGSHHIRSPYGLWMFCVMACLAVVVVFKVVHLYIQNH QDTPVQSTLLDVLNEGDKSTKQ >gi|333032607|gb|GL891819.1| GENE 60 55658 - 56824 1601 388 aa, chain - ## HITS:1 COG:PA0546 KEGG:ns NR:ns ## COG: PA0546 COG0192 # Protein_GI_number: 15595743 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Pseudomonas aeruginosa # 1 388 1 396 396 608 74.0 1e-174 MREYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITT TANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVDRQKPEDQGAGD QGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGKPV RLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMFVIGGPVGD CGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQV SYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQPMYKQTAAYG HFGREGSDTAFTWEKTDKVEALKDAAGL Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:21:17 2011 Seq name: gi|333032606|gb|GL891820.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld6, whole genome shotgun sequence Length of sequence - 61494 bp Number of predicted genes - 56, with homology - 53 Number of transcription units - 33, operones - 15 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 132 - 202 6.3 1 1 Tu 1 . - CDS 230 - 1732 1543 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 1839 - 1898 8.1 - Term 1913 - 1957 2.4 2 2 Op 1 . - CDS 1970 - 2869 1109 ## COG2321 Predicted metalloprotease 3 2 Op 2 . - CDS 2899 - 3822 1092 ## COG2354 Uncharacterized protein conserved in bacteria - Prom 3901 - 3960 5.9 + Prom 3831 - 3890 8.0 4 3 Tu 1 . + CDS 4030 - 5043 1366 ## COG0180 Tryptophanyl-tRNA synthetase + Term 5065 - 5106 3.6 + Prom 5078 - 5137 15.4 5 4 Tu 1 . + CDS 5250 - 5384 60 ## + Term 5406 - 5443 3.9 - Term 5386 - 5438 9.3 6 5 Op 1 39/0.000 - CDS 5456 - 6346 1203 ## COG0074 Succinyl-CoA synthetase, alpha subunit 7 5 Op 2 1/0.222 - CDS 6361 - 7527 1519 ## COG0045 Succinyl-CoA synthetase, beta subunit - Prom 7576 - 7635 2.4 - Term 7640 - 7668 1.0 8 6 Op 1 30/0.000 - CDS 7675 - 9108 766 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 9113 - 9149 4.9 9 6 Op 2 21/0.000 - CDS 9171 - 10367 1624 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 10 6 Op 3 5/0.111 - CDS 10367 - 13219 3102 ## COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes - Prom 13248 - 13307 5.0 - Term 13724 - 13764 8.3 11 7 Op 1 36/0.000 - CDS 13778 - 14488 701 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 12 7 Op 2 22/0.000 - CDS 14503 - 16338 2072 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 13 7 Op 3 24/0.000 - CDS 16351 - 16716 389 ## COG2142 Succinate dehydrogenase, hydrophobic anchor subunit 14 7 Op 4 . - CDS 16716 - 17078 327 ## COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit 15 8 Tu 1 . - CDS 17204 - 17314 66 ## - Prom 17355 - 17414 5.8 16 9 Tu 1 . + CDS 18072 - 19346 1424 ## COG0372 Citrate synthase + Term 19361 - 19416 7.8 - Term 19347 - 19404 5.3 17 10 Tu 1 . - CDS 19417 - 19884 499 ## COG3313 Predicted Fe-S protein - Prom 19983 - 20042 4.6 + Prom 19887 - 19946 5.7 18 11 Tu 1 . + CDS 20014 - 20946 1106 ## COG1054 Predicted sulfurtransferase + Term 20953 - 20986 5.4 - Term 20941 - 20974 5.4 19 12 Tu 1 . - CDS 20986 - 22107 881 ## AOLE_03665 hypothetical protein - Prom 22243 - 22302 10.2 - Term 22274 - 22315 3.6 20 13 Op 1 . - CDS 22333 - 22857 746 ## COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA 21 13 Op 2 . - CDS 22933 - 23139 305 ## - Prom 23345 - 23404 10.8 22 14 Op 1 . + CDS 23498 - 25384 2741 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 25441 - 25472 3.2 23 14 Op 2 6/0.111 + CDS 25482 - 25769 364 ## COG2921 Uncharacterized conserved protein + Term 25773 - 25822 9.1 + Prom 25784 - 25843 6.6 24 15 Op 1 . + CDS 25953 - 26606 686 ## COG0321 Lipoate-protein ligase B + Prom 26608 - 26667 1.7 25 15 Op 2 . + CDS 26687 - 27220 440 ## ABSDF0757 hypothetical protein 26 15 Op 3 1/0.222 + CDS 27222 - 28406 1355 ## COG1454 Alcohol dehydrogenase, class IV + Term 28441 - 28481 6.1 + Prom 28446 - 28505 6.2 27 16 Tu 1 . + CDS 28672 - 30057 1374 ## COG0531 Amino acid transporters + Term 30065 - 30093 1.0 - Term 30046 - 30088 7.7 28 17 Tu 1 . - CDS 30097 - 30657 683 ## COG0655 Multimeric flavodoxin WrbA - Prom 30685 - 30744 7.2 + Prom 30678 - 30737 8.2 29 18 Tu 1 . + CDS 30774 - 31154 481 ## COG1733 Predicted transcriptional regulators + Term 31156 - 31199 9.9 - Term 31134 - 31198 17.9 30 19 Op 1 . - CDS 31204 - 31677 541 ## COG0219 Predicted rRNA methylase (SpoU class) 31 19 Op 2 1/0.222 - CDS 31754 - 33127 1400 ## COG0007 Uroporphyrinogen-III methylase 32 19 Op 3 . - CDS 33195 - 34466 1601 ## COG0172 Seryl-tRNA synthetase - Prom 34507 - 34566 2.6 33 20 Tu 1 . - CDS 34585 - 35373 827 ## ABAYE0756 hypothetical protein - Prom 35409 - 35468 5.3 - Term 35450 - 35487 6.0 34 21 Tu 1 . - CDS 35501 - 36190 643 ## COG2834 Outer membrane lipoprotein-sorting protein - Prom 36271 - 36330 4.9 - Term 36390 - 36418 2.3 35 22 Op 1 32/0.000 - CDS 36437 - 36694 438 ## PROTEIN SUPPORTED gi|126642761|ref|YP_001085745.1| 50S ribosomal protein L27 36 22 Op 2 . - CDS 36713 - 37036 530 ## PROTEIN SUPPORTED gi|226951589|ref|ZP_03822053.1| 50S ribosomal protein L21 - Prom 37107 - 37166 5.5 37 23 Op 1 . + CDS 37468 - 38445 1237 ## COG0142 Geranylgeranyl pyrophosphate synthase 38 23 Op 2 . + CDS 38460 - 40520 1891 ## COG4389 Site-specific recombinase + Term 40531 - 40582 5.1 + Prom 40560 - 40619 4.5 39 24 Op 1 . + CDS 40705 - 41331 285 ## COG0671 Membrane-associated phospholipid phosphatase 40 24 Op 2 27/0.000 + CDS 41359 - 42606 1577 ## COG0845 Membrane-fusion protein 41 24 Op 3 9/0.111 + CDS 42619 - 45795 3208 ## COG0841 Cation/multidrug efflux pump 42 24 Op 4 . + CDS 45792 - 47249 552 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 47274 - 47301 -0.8 + Prom 47273 - 47332 8.0 43 25 Op 1 . + CDS 47359 - 47706 461 ## COG0393 Uncharacterized conserved protein 44 25 Op 2 . + CDS 47714 - 48148 382 ## COG0393 Uncharacterized conserved protein + Term 48178 - 48231 7.1 45 26 Op 1 . - CDS 48145 - 48579 308 ## ACICU_02992 hypothetical protein 46 26 Op 2 . - CDS 48634 - 49440 889 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 47 26 Op 3 . - CDS 49466 - 50143 476 ## ACICU_02994 hypothetical protein - Prom 50215 - 50274 7.0 + Prom 50152 - 50211 6.5 48 27 Tu 1 . + CDS 50340 - 53219 3182 ## COG0525 Valyl-tRNA synthetase + Term 53235 - 53280 10.5 - Term 53224 - 53265 3.3 49 28 Tu 1 . - CDS 53276 - 53860 426 ## ACICU_02996 putative tellurite resistance protein-related protein - Prom 53887 - 53946 6.3 50 29 Op 1 . - CDS 53998 - 55014 903 ## ACICU_02997 DnaJ domain-containing protein - Prom 55044 - 55103 6.1 51 29 Op 2 . - CDS 55109 - 56014 704 ## COG0679 Predicted permeases - Prom 56088 - 56147 6.5 + Prom 55884 - 55943 5.6 52 30 Tu 1 . + CDS 56131 - 57015 210 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 + Term 57180 - 57222 1.4 + Prom 57043 - 57102 4.3 53 31 Tu 1 . + CDS 57318 - 58505 1167 ## COG0004 Ammonia permease + Term 58525 - 58558 2.1 + Prom 58670 - 58729 8.3 54 32 Tu 1 . + CDS 58757 - 59356 412 ## COG3907 PAP2 (acid phosphatase) superfamily protein 55 33 Op 1 40/0.000 - CDS 59357 - 60691 1327 ## COG0642 Signal transduction histidine kinase 56 33 Op 2 . - CDS 60717 - 61391 751 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain Predicted protein(s) >gi|333032606|gb|GL891820.1| GENE 1 230 - 1732 1543 500 aa, chain - ## HITS:1 COG:PA3887 KEGG:ns NR:ns ## COG: PA3887 COG0025 # Protein_GI_number: 15599082 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Pseudomonas aeruginosa # 6 431 1 422 424 169 33.0 1e-41 MGNFFLLQAFTVVFALSIATTIFNKRILGFPQAIGVPLVSAIFVFILQWGASLLNGNQFI TINIHNIEEAVRHIDFYDFLINGVICFILTSSALKFKISDLRSYWKQISILATIALVICA VLFGSLLYGFQLLVGHHVPILVLLLLGAALGATDPIGIKGVLSSIRAPHHLIVKLEGESL FNDAMCIALFMTLLNVLQGEHFSLVATLEALLYEIVVAVGIGWAFGIGTLRLLRGKHEME SLILTTALLASGAYLVALFAHASAPIACVIGGLIVGNKWKEIREEREIREVNHFWHTVEG IINSFLFTLIGLELFILDLNFSLILGGIVAFFILHISRFAANFMSFAFFPTMRKTKSYNG SLTILSWGGVRGGISLALILAVANIPALSPYSSILIGYTFISVLLSGVVCGLGLPAVMNA FYYNPNEETEGLKGFYQKLCHKMNRRGFQYIVGEDALGRETITIFNPDVIVDQKTEDGIA TMHDPNKLQEVKRFESPDNF >gi|333032606|gb|GL891820.1| GENE 2 1970 - 2869 1109 299 aa, chain - ## HITS:1 COG:YPO3058 KEGG:ns NR:ns ## COG: YPO3058 COG2321 # Protein_GI_number: 16123235 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Yersinia pestis # 1 295 1 285 288 278 48.0 1e-74 MRWRDRRVSTNVEDRRGGGGVRAGGISIIGLVVAFVAWKFFGVDPQQAYQATQQVTASQQ SNATAPESLTAEQKEASDFVGTVLADTEDTWTPIFKQLGKTYTPPKLVLFSGMIQSGCGT AQSAMGPFYCPADQKVYIDTEFFKDMREQMGISGEQNQTELSRQDQAGDFAQAYVVAHEV GHHVQTLLGISSQVQQARAQVSQREGNQLSVRQELQADCLAGIWANHNQQRTQFLEQGDV EEAMDAAQKIGDDYLQKRATGQVVPDSFTHGSSEQRMHWFQVGLKTGDISQCDTFNNSI >gi|333032606|gb|GL891820.1| GENE 3 2899 - 3822 1092 307 aa, chain - ## HITS:1 COG:PA1857 KEGG:ns NR:ns ## COG: PA1857 COG2354 # Protein_GI_number: 15597054 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 2 304 3 302 307 302 59.0 6e-82 MASGLLLLLDDIATILDDVALMSKMAAKKTAGVLGDDLALNAQQVTGVRADRELPIVWKV AKGSFVNKLILVPLALLISVIAPWLINPLLMLGGLFLCYEGVEKVLHTITHKKASTSEEA QKEFDSEELDLATFEKDKVKGAIRTDFILSAEIVVISLGTVATATLMTKVSVLSIIAVVM TIGVYGLVGMIVKIDDLGLYLTKQAASFKQTIGRGLLAFAPLLMKLLSIVGTIAMFLVGG GIINHTIPLLHHVTENTVDHVETIPAVGNIIGALTPTLINFAIGIVAGAIVLLVVSLIQK MWPKASS >gi|333032606|gb|GL891820.1| GENE 4 4030 - 5043 1366 337 aa, chain + ## HITS:1 COG:STM4508 KEGG:ns NR:ns ## COG: STM4508 COG0180 # Protein_GI_number: 16767752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 8 334 5 331 337 436 63.0 1e-122 MSNVDQRPIILTGDRPTGQLHLGHFVGSLRSRVGLQDSHHQHLLLADAQALTDNADNPDK VRRNILEVALDYLAVGIDPTKTTICVQSCLPALNELTMLYLNFVTVARLERNPTIKSEIQ MRGFERDIPAGFLCYPVAQAADITAFKATVVPVGEDQIPMIEQTNEIVRRVNRQIGQDLL PECKALLSNMARLPGFDGKAKMSKSLGNTIVLNASDKDIKKAVNAMYTDPNHLRIEDPGQ VEGNIVFTYLDAFDPNKEEVEELKAHYRRGGLGDGTVKKRLEGVLKELITPIRERREELA KDPDYIMDVLRQGTDKCRIITQQTLDEVKDGLGLFKF >gi|333032606|gb|GL891820.1| GENE 5 5250 - 5384 60 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLTTFLLKPKLFLTDSLFYAVITPIIAYFFVFFNQIIPYINFI >gi|333032606|gb|GL891820.1| GENE 6 5456 - 6346 1203 296 aa, chain - ## HITS:1 COG:NMA1154 KEGG:ns NR:ns ## COG: NMA1154 COG0074 # Protein_GI_number: 15794100 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Neisseria meningitidis Z2491 # 1 296 1 296 296 503 93.0 1e-142 MSVLINKDTKVLVQGFTGKNGTFHSAQALDYGTKVVGGVTPGKGGTTHLDLPVFNTMKEA VRETNADASVIYVPAPFVLDSIVEAVDSGVGLIVVITEGVPTIDMLKAKRYLETNGNGTR LVGPNCPGVITPGECKIGIMPGHIHQPGRIGIISRSGTLTYEAVAQTTKLGLGQSTCIGI GGDPIPGMNQIEALQLFQDDPDTDAIIMIGEIGGTAEEEAAEFIKSNVTKPVVGYIAGVT APKGKRMGHAGAIISGGQGTAEEKFAAFEKAGMAYTRSPAELGSTMLQVLKEKGLA >gi|333032606|gb|GL891820.1| GENE 7 6361 - 7527 1519 388 aa, chain - ## HITS:1 COG:NMB0959 KEGG:ns NR:ns ## COG: NMB0959 COG0045 # Protein_GI_number: 15676852 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Neisseria meningitidis MC58 # 1 388 1 388 388 603 82.0 1e-172 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQLGGKFAVMKAQVHAGGRGKAGGV KVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSR RITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVK IMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYRLPKVAALRDKSQEN ERELKASEFDLNYVALEGNIGCMVNGAGLAMATMDIIKLYGGQPANFLDVGGGATKERVI EAFKIILADTSVQGVLINIFGGIVRCDMIAEAIIAAVQEVNVTVPVVVRLEGNNAELGAK LLDESGLKLISANGLSDAAEKVVAAVKA >gi|333032606|gb|GL891820.1| GENE 8 7675 - 9108 766 477 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 4 470 3 457 458 299 37 2e-80 MSQQFDLVVIGGGPGGYEAAIRAAQLGFKVACIEKRIHNGKPSLGGTCLNVGCIPSKALL DSSHRYEDTVHHLADHGITTGEVNFDLAKLLARKDKIVDQLTGGIDQLLKGNGIEWLKGT GKLLAGKKVEFVPHEGETQILEPKYVILASGSVPVNIPVAPVDQDIIVDSTGALNFPEVP KRLGVIGAGVIGLELGSVWRRLGAEVVVFEAMDAFLPMADKALSKEYQKILTKQGLDIRI GAKVSGTEVNGREVTVKYTQGGEDKEQTFDKLIVCVGRKAYAEGLLAEDSGIKLTERGLV EVNDHCATSVEGVYAIGDLVRGPMLAHKAMEEGVMAVERIHGHAAQVNYDTIISVIYTHP EAAWVGLTEEQAKEKGHEVKTGQFGFAVNGRALAAGEGAGFVKFVADAKTDRLLGMHVIG PAASDIVHQGMIALEFVSSVEDLQLMTFGHPTFSEVVHEAALAVDGRAIHAIQRKRK >gi|333032606|gb|GL891820.1| GENE 9 9171 - 10367 1624 398 aa, chain - ## HITS:1 COG:PA1586 KEGG:ns NR:ns ## COG: PA1586 COG0508 # Protein_GI_number: 15596783 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Pseudomonas aeruginosa # 1 398 1 409 409 478 66.0 1e-134 MATEIKAPVFPESVADGTIATWHKKVGEPVSRDEVICDIETDKVVLEVVAPADGSLVAII KGEGDTVLSDEVIAQFEAGAGAAAAAPAAVEQAVAQTQAGAAPVVERNETVSDQAPAVRK ALTESGIAASDVQGTGRGGRITKEDVANHQAKPAANVTPLSVAVGERIEKRVPMTRLRKR VAERLLAATQETAMLTTFNEVNMKPIMELRKQYKDAFEKRHGARLGFMSFFVKAATEALK RYPAVNASIDGDDIVYHGYYDIGVAVSSDRGLVVPVLRDTDRMSYAEVEAGIAAYAAKAR DGKLSIEEMTGGTFTITNGGTFGSLLSTPILNQPQTGILGMHKIQERPMAVNGQVEILPM MYLALSYDHRMIDGKEAVGFLVAIKELLEEPAKLILDL >gi|333032606|gb|GL891820.1| GENE 10 10367 - 13219 3102 950 aa, chain - ## HITS:1 COG:PA1585 KEGG:ns NR:ns ## COG: PA1585 COG0567 # Protein_GI_number: 15596782 # Func_class: C Energy production and conversion # Function: 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes # Organism: Pseudomonas aeruginosa # 18 941 15 943 943 1278 65.0 0 MGPQMQEVADALRLDTELSADSAAYIEELYEQYLTSPTSVAEDWRQYFDKYPKGDQPHSA VREQFLLLGRNANRVQPVVQSTVSTEHERRQIGVLQLIAAYRNRGHQKAKLDPLGLAKRE DIPDLDLSAHGLTKSDLDTVFNTGNLEIGKSEATLAEMIEAMEAIYCGSIGVEYMHIVDT KEKRWIQQRLESARGKFNFSNEQKKGFLERLTAAEGLEKYLGNKYVGAKRFGVEGGESFI PMVNEIIQRAGAVGCKEVVIGMPHRGRLNLLVNIMGKNPADLFGEFEGKALHKKGSGDVK YHQGFSSNVMTPGGEVHLALAFNPSHLEIVGPVVEGSVRARQVRRRDIGGDDVLPVIVHG DAAFAGQGVNMETFQMSQTRGYTVGGTVHIIVNNQVGFTTSDPRDARSTEYCTDVAKMIQ APIFHVNGDDPEAVIFATQLAHDFRHEFRKDVVIDLFCYRRRGHNEADEPSGTQPLMYQV IAKKATTRTLYADQLVQEKVLDRAEADQMVEDYRADLEAGNHVANALILEPNTKMFVDWT PYLGHEYTDDWDTSFDINRLKELGEGMSKLPEGFVMQRQVQKVIEDRVKMQTGETPLNWG AAETLAYATLLDEDYLVRITGEDVGRGTFSHRHAKLHNQVDGSTYIPLCHVKENQPRFAI YDSLLSEEAVLAFEYGYATTIPKSLIIWEAQFGDFVNCAQVVIDQFIASGETKWERVCGL TMLLPHGFEGQGPEHSSARLERFLQLCAEDNMQVITPTTPAQIFHALRRQAVRPIRKPLI VMSPKSLLRHKLATSTLEELAHGSFQTVIDEIDQINKSDVTRLVLCGGKVYYDLLEKRRE QNLTNVAIVRIEQLYPYPEQRLAEILAAYPNVKELVWAQEEPKNQGAWLFIAPRLYDDIL KSGKQIRISFAGREASAAPACGSPYLHAKQQAQLINDALAIEAEQSGDSQ >gi|333032606|gb|GL891820.1| GENE 11 13778 - 14488 701 236 aa, chain - ## HITS:1 COG:RSc1993 KEGG:ns NR:ns ## COG: RSc1993 COG0479 # Protein_GI_number: 17546712 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Ralstonia solanacearum # 6 235 3 232 233 363 72.0 1e-100 MSRGTRTFEIYRYDPDKDKAPYMQTFKLELTDKHRMLLDALLALKVQDETLTFRRSCREG ICGSDGVNINGKNGLACLQNLNDLPEKIVIRPLPGLPVVKDLVVDMNQFYDQYDKIQPFL INNQPAPPKERLQSPEEREHLNGLYECILCACCSTSCPSFWWNPDKFLGPSALLNAYRFI IDSRDTATAERLARLDDPFSLFRCKGIMNCVSVCPKGLNPTKAIGHIRNMLLDQAG >gi|333032606|gb|GL891820.1| GENE 12 14503 - 16338 2072 611 aa, chain - ## HITS:1 COG:RSc1994 KEGG:ns NR:ns ## COG: RSc1994 COG1053 # Protein_GI_number: 17546713 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Ralstonia solanacearum # 18 611 13 592 592 921 75.0 0 MGAINPKEDYSNIQNLTFDAVIVGGGGSGMRASYQLAQAGLKVAVLTKVFPTRSHTVAAQ GGIGASLGNMQEDNWHFHFYDTVKGSDWLGDQDAIEFMCREAPKVVYELEHLGMPFDRNA DGTIYQRPFGGHSANYGDKPVPRACAAADRTGHALLHTLYQSNVKMGTQFFVEWIALDLI RNEAGDVLGVTAIDQETGNIAVFQAKATLFATGGAGRVYRASTNAYINTGDGLGMAARAG IPLQDMEFWQFHPTGVAGAGVLLTEGCRGEGAILRNKDGEPFMERYAPTLKDLAPRDFVS RSMDQEIKEGRGCGPKGDYILLDMTHLGADTIMKRLPSVFEIGKKFANVDITKEPIPVVP TIHYQMGGIPTNMHGQVCLPEPGTDNYTKPVKGFYAIGECSCVSVHGANRLGTNSLLDLV VFGKAAGEHIIDYVTKHHGDEYAPLPTNVLEQTLARVRKLDESTSGENAQEVADAIRDIV QDHAGVFRTQALLDKGVKEILALEPRVRNIHLKDKSKVFNTARVEALEVENLYEVAKATL ISAAARKECRGAHTVVDYELPADHPTYSYGRRDDEWMKHTLWYSSDNRLEYKPVRFKPLT VDPIPPAPRTF >gi|333032606|gb|GL891820.1| GENE 13 16351 - 16716 389 121 aa, chain - ## HITS:1 COG:PA1582 KEGG:ns NR:ns ## COG: PA1582 COG2142 # Protein_GI_number: 15596779 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase, hydrophobic anchor subunit # Organism: Pseudomonas aeruginosa # 1 120 2 121 122 85 40.0 2e-17 MKSATGLTGSGSRDWFIQRVSAVVLAAYTVVLFGWILCKGGFDYQQWAGFMMTLPMKIFS LLAILSLIAHAWIGMWQVFTDYVTTRQMGPSAKGLRLVLTTAVIIAVFVYAIWGIQIFWA N >gi|333032606|gb|GL891820.1| GENE 14 16716 - 17078 327 120 aa, chain - ## HITS:1 COG:PA1581 KEGG:ns NR:ns ## COG: PA1581 COG2009 # Protein_GI_number: 15596778 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, cytochrome b subunit # Organism: Pseudomonas aeruginosa # 14 118 24 127 128 82 46.0 2e-16 MGQVLAVNLRSPVAIASILHRLSGVIVFLLVPVLLWILDKSLSSPEGFDYVKNVVFGNIL VRFVVWVFVAGLIFHFIAGVKHLLADLGFAEELQSGRIAATISLILSVVAIIAAFVWIMF >gi|333032606|gb|GL891820.1| GENE 15 17204 - 17314 66 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFGYVNDSYLMSFCGKAKVDCLYFDISRFIIQCRL >gi|333032606|gb|GL891820.1| GENE 16 18072 - 19346 1424 424 aa, chain + ## HITS:1 COG:PA1580 KEGG:ns NR:ns ## COG: PA1580 COG0372 # Protein_GI_number: 15596777 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Pseudomonas aeruginosa # 7 421 4 420 428 684 76.0 0 MSEATGKKAVLHLDGKEIELPIYSGTLGPDVIDVKDVLASGHFTFDPGFMATASCESKIT FIDGDKGILLHRGYPIDQLATQADYLETCYLLLNGELPTAEQKVEFDAKVRAHTMVHDQV SRFFNGFRRDAHPMAIMVGVVGALSAFYHNNLDIEDINHREITAIRLIAKIPTLAAWSYK YTVGQPFIYPRNDLNYAENFLHMMFATPADRDYKVNPVLARAMDRIFTLHADHEQNASTS TVRLAGSTGANPYACISAGISALWGPAHGGANEAVLKMLDEIGSVENVAEFMEKVKRKEV KLMGFGHRVYKNFDPRAKVMKQTCDEVLEALGINDPQLALAMELERIALNDPYFVERKLY PNVDFYSGIILKAIGIPTEMFTVIFALARTVGWISHWLEMHSGPYKIGRPRQLYTGEVQR DIKR >gi|333032606|gb|GL891820.1| GENE 17 19417 - 19884 499 155 aa, chain - ## HITS:1 COG:PA1788 KEGG:ns NR:ns ## COG: PA1788 COG3313 # Protein_GI_number: 15596985 # Func_class: R General function prediction only # Function: Predicted Fe-S protein # Organism: Pseudomonas aeruginosa # 5 56 8 59 155 80 61.0 2e-15 MLSLTPCAGRCSTVFGDQVCRGCRRFNHEVIQWNTYTAEQRLAVWKRLDDQLDQILVPML PQANLQHVEGFILGKRVRLMEGASKGRKLYHALKICEKNKHLAHESGLGISEAQVKEVWT EFERRILALAKASYELAWLRADGISHHLLNMFEEE >gi|333032606|gb|GL891820.1| GENE 18 20014 - 20946 1106 310 aa, chain + ## HITS:1 COG:DR1100 KEGG:ns NR:ns ## COG: DR1100 COG1054 # Protein_GI_number: 15806120 # Func_class: R General function prediction only # Function: Predicted sulfurtransferase # Organism: Deinococcus radiodurans # 10 305 2 297 300 370 60.0 1e-102 MNATVEQLAPVEQQATAGWVVAALYQFKEVQDPADLQQRLLDLVKTINLCGTLIVAGEGI NGTVAGDREAIDTIHQFLLNEGFNAMEYKESHSSDKPFRKMKIKLKKEIVTLGVEVKPRD LVGHYLDPKEWNELIARDDVILIDTRNDYEYKAGTFKGAIDPKTETFREFPEYVKKELEQ HKDKKIAMFCTGGIRCEKSTSLLLQEGFKEVYHLKGGILKYLEETPPDESLWEGECFVFD GRTAVTHGVEEGANIKCHACGWPLTPEESALPSYEHGVSCLYCIDKTTEKQKAGFRMRQS QIAAAKRKRL >gi|333032606|gb|GL891820.1| GENE 19 20986 - 22107 881 373 aa, chain - ## HITS:1 COG:no KEGG:AOLE_03665 NR:ns ## KEGG: AOLE_03665 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 373 1 373 373 570 79.0 1e-161 MNIIFKITSVLSVILLVACGDENSNSVSEEKIAQSTQNQVTYKLISGTAFSTSVLNGANV TAICKDGLGFKNKVIVNAQGQWQGEIDTSKFPCRLEAKAEGQTYHSYIDHEGRVNINPLT DMVVAYASNQVPVTWYQSGSMTTEKLNSANSALVAELIKKGYGINNDMDLFTAEMKANNP IHQAIQELLEAIQNNRNIKDYDSLLMLIKDGNLSQVPEKIEFLNNSVAKVFGFNKDACQV LPKTENTEQYNKCSDKVIDDFSESNLVATDSDEKCILVKQGNKVSFTKGNQTVSALLDKE QEDGMDFTFDEGELEIIDLIINTGPYTDINTYSQIGLSFSSDGKLRAVVGKSPIVSSMNC ASPEFKKLMELYK >gi|333032606|gb|GL891820.1| GENE 20 22333 - 22857 746 174 aa, chain - ## HITS:1 COG:PA1440 KEGG:ns NR:ns ## COG: PA1440 COG3318 # Protein_GI_number: 15596637 # Func_class: R General function prediction only # Function: Predicted metal-binding protein related to the C-terminal domain of SecA # Organism: Pseudomonas aeruginosa # 3 173 4 183 195 93 34.0 2e-19 MSALDLDQLSEYLDGDHNEYGLDFAATHGFLCAIAVGPQFDRWLDELFEGNQKKVPAEII QQIKVWLESIRQDLANENGIEFPFEVEEADVESSLGDWSVGFVDAMFLNEEAWFAPEYEE QLVDLTLPIMVFSGIDEEDPQMESFRRNGQLMDELAEEIPDNLNELYLMYHTPN >gi|333032606|gb|GL891820.1| GENE 21 22933 - 23139 305 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSTDFELDDNYGDDDDVGFDESSGKISAKESLEKRRLIDDLLAQRRLERELKDFDYDLD DDDLDDED >gi|333032606|gb|GL891820.1| GENE 22 23498 - 25384 2741 628 aa, chain + ## HITS:1 COG:STM3211 KEGG:ns NR:ns ## COG: STM3211 COG0568 # Protein_GI_number: 16766511 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Salmonella typhimurium LT2 # 5 627 48 660 660 651 62.0 0 MSDMHSPTSQVAALISRGKEQGYLTYAEVNDHLPDSITESEQIEDIIQMLQDVGIPVHER APESDDTMFGESADATDEVAEEEAAAVLASVENEPGRTTDPVRMYMREMGTVELLTREGE ISIAKRIEEGIRDVLNSIAYWPNAVEVVLKEYNDFLTGERRLADILSGYLDPETDEDIPE VLEDVEELEEEDESSTKSTKEVKLDDDDEEEESEGDDDSEGDSGPDPEVAKVRFAELEAA WAQTKAVIEKHGRNSPEANEALESLATVFMMFKFTPRLFDIISEMIRGTHEQIRANEREI MRYAVRRGRMDRNQFRTSFPKQESNPAWLDEQIAKAPAEIKAHLEKVRPDVLAFQQKIAD IEKELGLNVSEIKDISKRMAIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQ EGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRV SRQLLQEMGREPTPEELGERLEMDEVKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDQ NITSPIDAATSEGLKEATREVLENLTEREAKVLKMRFGIDMPTDHTLEEVGKQFDVTRER IRQIEAKALRKLRHPSRSEHLRSFLEND >gi|333032606|gb|GL891820.1| GENE 23 25482 - 25769 364 95 aa, chain + ## HITS:1 COG:PA3998 KEGG:ns NR:ns ## COG: PA3998 COG2921 # Protein_GI_number: 15599193 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 17 95 14 93 93 57 38.0 8e-09 MLDRTPSRELREDLWVFPMDYPIKLIGDAGEELRIAVVDILVKHFPDFDQTTLKVQESRT GKYHSLTAQLRFDELEQVHALYADLAACPQIRTAL >gi|333032606|gb|GL891820.1| GENE 24 25953 - 26606 686 217 aa, chain + ## HITS:1 COG:PA3997 KEGG:ns NR:ns ## COG: PA3997 COG0321 # Protein_GI_number: 15599192 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase B # Organism: Pseudomonas aeruginosa # 19 208 15 204 217 224 55.0 1e-58 MSLDKPTLIIRQWNDLQDYQSKFESMKNLTNQRDENTADELWLLQHHEVLTQGQAGKPEH ILIPSNIPVVQTDRGGQVTWHGPGQLVAYFMFDLNRLKWNVRTLVSFAEQFMIDVLKKYN IEAYAKPDAPGVYVDGRKIGSLGFKIRRGRSYHGLALNLDCALTGFQTINPCGYAGLEMV RIQDLVTPYPLFEQLCQDFIEYIKGTGYFNDPEVKIE >gi|333032606|gb|GL891820.1| GENE 25 26687 - 27220 440 177 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0757 NR:ns ## KEGG: ABSDF0757 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 177 1 177 177 318 100.0 5e-86 MISTKAVKPTLQLAYVKLMMDVVGRGLVMASQVDSEIQEEVSKFPVHFVLSMNVFPNGPA FFARVTEDKQLELLKRAEKKPDLTITFKHVTHAFLVFSFQESTAQAFANDRMIADGDVSA AIRLVRCLNKMESLILPKLVASLAVKEYPTELTLKEKFNQAANIYLKVAKSYFKRSA >gi|333032606|gb|GL891820.1| GENE 26 27222 - 28406 1355 394 aa, chain + ## HITS:1 COG:YGL256w KEGG:ns NR:ns ## COG: YGL256w COG1454 # Protein_GI_number: 6321181 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Saccharomyces cerevisiae # 8 394 90 463 465 216 32.0 9e-56 MAKPYYEFFCPVKVIAGNAALEHIPFELATLGAKRPLIITDKGVRANGLLNPIEAAFSTT DAVIGHVFDDVPPDSSLEVVRLAAEAYRTNKCDAIIAVGGGSVIDTSKATNILVSEGGDD LLQYSGAHNLPKPLKPFFVIPTTSGTGSEVTMVAVVSDTQKNVKLAFASYYLMPHAAILD PRMTLTLPPHLTAMTGMDALTHCVEAYTCMAANPLSDAYASAGIKKISENLFNVLENPND SQGRLELAQASTMAGIAFSNSMVGLVHSLGHALGAVAHLPHGLCMNLFLPYVLEYNKQVN GQKIGELLLPLAGADIYAQTPATQRADRAIATILAMRDRLFSLTKLPRTLRETGKVTEAQ LDEVAEKALNDGSIIYNPKEASLKDLREILQKAW >gi|333032606|gb|GL891820.1| GENE 27 28672 - 30057 1374 461 aa, chain + ## HITS:1 COG:PA2041 KEGG:ns NR:ns ## COG: PA2041 COG0531 # Protein_GI_number: 15597237 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 1 461 1 451 456 411 47.0 1e-114 MTNLSGTKPTAKLQKNLVLWHIIIIGLAYIQPLTLFDTFGLVSERSGGHVPTSYIFALVA ILLTSISYGHMIKRYPSSGSAYTYAQKSIHPNVGFMVGWSSWLDYLLSPLVNIILADIYL RALFPEVNNWLWVIGLTALMTVINLFGARFVARFNSTIVVIQLGVIFYFVYQVYILLTQG VYADGTLNPDKAELWSLTPFWNDMTSISALIGGATVLCFSFTGFDALSSLAEETKDAEKT LPKAIFSTALLAGIIFIVSTYFIQLYFPSNPNIYFKPLDESQPVMVAAIGSIAFKTLVLY FAVVAVMASGISAHAGVSRLMYVMGRDGVINKKLFGHISPRLHTPTYNILIVGVVALSAG FLDLEHIVNLISFGALTAFSFVNFSVISRYALRDGKNKSIKDIINYIIVPTLGFASVFLM WLEIDKLALQIGLAWAVFGVGYLAYKTKGFKYNAPQHNEHE >gi|333032606|gb|GL891820.1| GENE 28 30097 - 30657 683 186 aa, chain - ## HITS:1 COG:AGl1309 KEGG:ns NR:ns ## COG: AGl1309 COG0655 # Protein_GI_number: 15890781 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 183 5 186 193 181 54.0 6e-46 MSNSNIAVVYFSGYGHTKVVAETFANEINAQLIQIDQEGNITEQDWETLNNAKGIVFGAP TYMGTAPWQFKKFADATSKVWFTRGWQDKVFAGFTNSASLNGDKQVTLIQLQTLASQHGG IWVSLGLLPANTKDATREDVNNLGGSVGLLVQSPSDASVDEVPTGDLETAKVYAKRVQAI VNKIYG >gi|333032606|gb|GL891820.1| GENE 29 30774 - 31154 481 126 aa, chain + ## HITS:1 COG:AGc1731 KEGG:ns NR:ns ## COG: AGc1731 COG1733 # Protein_GI_number: 15888287 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 122 73 188 190 127 51.0 4e-30 MKECLKYNIFQQHCPARLFFEKIADKWVLLILNILEHETQHFNLLKKNIEGISPKVLSQK LKMLERDGFIERKIQDTSPIRVDYSLTPLGQNVAAMAYQLKEWAETNIEQVLAAQIMYDE KILEQA >gi|333032606|gb|GL891820.1| GENE 30 31204 - 31677 541 157 aa, chain - ## HITS:1 COG:PA5127 KEGG:ns NR:ns ## COG: PA5127 COG0219 # Protein_GI_number: 15600320 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Pseudomonas aeruginosa # 1 153 1 150 153 189 59.0 2e-48 MIHVVLYEPEIPANTGNIIRLCANTGAQLHLVKPLGFELDDKKLKRAGLDYHEWARMQIW DNIELCLADLKAKGVEHVFPLTTKGSATPHTVDLNRPVALLMGPETRGLPEHVRLMFPQE QWIRLPMAENSRSLNLSNATAVIVYEAWRQQGFKKLG >gi|333032606|gb|GL891820.1| GENE 31 31754 - 33127 1400 457 aa, chain - ## HITS:1 COG:PA2611_2 KEGG:ns NR:ns ## COG: PA2611_2 COG0007 # Protein_GI_number: 15597807 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Pseudomonas aeruginosa # 216 456 4 244 252 357 69.0 2e-98 MDIFPISLKLQQQRCLIVGGGHIALRKATLLAKAGAIIDVVAPAIEDQLLQLIKTTDGEP FIEAFAEKFLSTPYRLVIAATNDAEVNKTVFEQCEARNLLVNSVDDIPHCRFMVPAIIDR SPLIVSVASNGTSPVLSRQIRTQLETSIPHGMGKLAEFSGKWRNQVKEKISNPDERRIFW ENLYASPLKEQVFNDNLDVADSMLEQALQEWKAPKGEVYLVGAGPGDPELITLKALRLMQ QADVVIYDRLVSAPILELCRRDATKIYVGKARSNHSVPQEGINALLVDYAKKGKRVCRLK GGDPFIFGRGGEEIQELFQAGVPFQVVPGITAASGCSAYAGIPLTHRDYAQSVRFLTGHL KEGSPELPWNELVYENQTLVLYMGLVGLERICEQLIAHGQRPDMPVALISKGTTPEQKVV VGSLADIASKVTEHQIHAPTLTIIGEVVRLREQLQWN >gi|333032606|gb|GL891820.1| GENE 32 33195 - 34466 1601 423 aa, chain - ## HITS:1 COG:STM0963 KEGG:ns NR:ns ## COG: STM0963 COG0172 # Protein_GI_number: 16764324 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Salmonella typhimurium LT2 # 1 422 1 429 430 572 66.0 1e-163 MIDPKLLRNNIEVVNAALAKRGVQLDVQEWASLETRRKDLQSKTEKLQAERNAGAKQVGQ IKKSGGDASEIMARMQAIGDEIKAAEVALSELQNEIEQKALSIPNLPDESVPAGKDENDN VEISKWGTPRQFDFEIKDHTDLGEWMGGLEFETATKLTGSRFSVLKGPLARLQRALTQFM LDTHTLKNGYTEAYVPYLVNADSLRGTGQLPKFEEDLFKLQGEKEYYLIPTAEVPVTNFV RDEIIDADRLPLKYAAHTPCFRSEAGSYGRDTRGLIRQHQFDKVEMVQIVKPETSMQALE ELTAHAEGILQALGLPYRKILLCGGDMGFGATKTYDLEVWVPSQNTYREISSCSNMGDFQ ARRMKARYRMDQKKTELVHTLNGSGLAVGRTLLAVMENYQRKDGSIEIPEVLRPYMGGAT FID >gi|333032606|gb|GL891820.1| GENE 33 34585 - 35373 827 262 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0756 NR:ns ## KEGG: ABAYE0756 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 262 13 274 274 504 100.0 1e-141 MQLYDKKIIFILPMLAAMVAVSGCQPKSTAKDEQPASSASVKEQKQAEVPVIQAKVVPVK LPKPKVCLEDGCTEYDFQTVQTNQKWINDYFTNRIKKADPNAFANLADKPVEVPEGEPSS SQSAIYVRYLGQNYNLATFAFQTYSYSAGAAHGMSHQEFVNFDLLNKKHITVEELIKPDV EKQLVDALFDANTNWLQEHNISREKLQLSDNFYYGANGIVFVYPIYELASYAEGMSELTL PYFEAAKYIKPEYLPSVPNYNL >gi|333032606|gb|GL891820.1| GENE 34 35501 - 36190 643 229 aa, chain - ## HITS:1 COG:PA2614 KEGG:ns NR:ns ## COG: PA2614 COG2834 # Protein_GI_number: 15597810 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein-sorting protein # Organism: Pseudomonas aeruginosa # 20 229 9 208 208 120 34.0 2e-27 MLRKTMCAITLSASVLAPVMSTTAFAAPVAAPEQQAIGNLVNQLSGLQRLTADFEQTTKA NTKTVAQKKGLSAQHMNQTFKGSMKVERPGKFYWETVSPSKQTIVTSGKTVWIYDPDLQQ AVRQSLDDQVADTPALLLSGNTNQIMKSYRVTQPDKSKLYFTLFPKKEDGAFQSLTISFG ANKAPTLMVLQDSLGQTTYVRFKNVKVNASIPASTFNFTPPKGTDIIDQ >gi|333032606|gb|GL891820.1| GENE 35 36437 - 36694 438 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126642761|ref|YP_001085745.1| 50S ribosomal protein L27 [Acinetobacter baumannii ATCC 17978] # 1 85 1 85 85 173 100 2e-42 MATKKAGGSTKNGRDSNPKMLGVKVYGGQTVTAGNIIVRQRGTEFHAGANVGMGRDHTLF ATADGVVKFEVKGQFGRRYVKVETV >gi|333032606|gb|GL891820.1| GENE 36 36713 - 37036 530 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226951589|ref|ZP_03822053.1| 50S ribosomal protein L21 [Acinetobacter sp. ATCC 27244] # 1 107 2 108 108 208 94 5e-53 MEYVMYAVIQSGGKQHRVVEGETLKVELLKAESGATITFDDVLMVVNGDNIQIGAPVVAG AKVTAEVIGHGRHDKIRIIKMRRRKHYRKQQGHRQWFTELKITGISG >gi|333032606|gb|GL891820.1| GENE 37 37468 - 38445 1237 325 aa, chain + ## HITS:1 COG:PA4569 KEGG:ns NR:ns ## COG: PA4569 COG0142 # Protein_GI_number: 15599765 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Pseudomonas aeruginosa # 13 323 10 320 322 285 49.0 7e-77 MVIDFKQDILAPVATDFAAMDHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAAR ACGLDNMQNAQRLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLI ARAFDLLVDLNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFE LATEGAAILAGQEAYREPLRLFAGHFGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPT LPLISALAHSTGEEHAIIRRSIATGGVDQLPKVIEIVQKSGALDYCQRRAQEETEAALQA LSILPDTPYRQALINLTRLALHRIQ >gi|333032606|gb|GL891820.1| GENE 38 38460 - 40520 1891 686 aa, chain + ## HITS:1 COG:NMA1485 KEGG:ns NR:ns ## COG: NMA1485 COG4389 # Protein_GI_number: 15794385 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase # Organism: Neisseria meningitidis Z2491 # 88 668 86 658 668 335 34.0 2e-91 MHINFSEHFFKIQKQLENPQAVIDENILIDLVNALRPSDPHDTDEIEQKIQAFIDSLLLT PTAPALLQTFLLRLINQYKQVSLYADSGILSLDGFWNQLGQRLGGHFLPLIEDASQLKIL IGKIFYLESDSIWLNNVDDKDWATLFGLIGQSNSNVDEKHAIQREMIKAITVLSYRISGI GLYPEFINAQPELTEYESPFLVQNREIIEFIEKYKKQDISSNDIAVLPPPDASQAFVMLE QCRDVVLKIRRATKRIGVSLSLTYLLSLLEQCLDRIELLLYLVVDDSEGRYVSLGNLISD LTKAHYSEKSVRSLLSTTSELIAFQVTENASRTGEHYVSTDTKGFWGMYKAAAGAGVIIA CMASLKILAARMTMAPLMQAFTFSMNYSLGFILIHVLHFTVATKQPAMTAAALAATVQQR KGSKTAQIAELAALIINIIRTQFIAILGNISIAIPTAALITFAWQFYLDEPLLTHTKATY LLHSLNPFTSLAVPHAAIAGVCLFLSGLIAGYFDNMAVYRKVGPRLKAHRRLRNLFGQER LNRFAEYIERNLGALAGNFLFGVMLGSMGTIGFILGLPLDIRHIAFASANFIQGLMTING SPDIGLIIVSFLGVLCIGLTNLFVSFTLTIIVALRARRVRFEQWKPLAKLVMTHFLTRPS DFFWPPKQPLELEENAQANSGKKAEH >gi|333032606|gb|GL891820.1| GENE 39 40705 - 41331 285 208 aa, chain + ## HITS:1 COG:mll8081 KEGG:ns NR:ns ## COG: mll8081 COG0671 # Protein_GI_number: 13476690 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Mesorhizobium loti # 5 200 19 223 230 84 30.0 2e-16 MPYLLLCIGCVFLGLGVLGLFVPSLQSLDLLTVQTLSHHRLDYLNTITTFLARVGGMPFV CFLSFLVCIYLAWYKKYITVIFISLGVIGSITMGWLLKWCVNRPRPPEAYHIVESYGASF PSAHSVYASTLACLAMIMLCHKHNINSPYIVLISCLWFVCMGLSRIYAGVHFPTDVLAGW GIGFIWIALLWLWLLQTQSRLSKKQIYF >gi|333032606|gb|GL891820.1| GENE 40 41359 - 42606 1577 415 aa, chain + ## HITS:1 COG:ECs0516 KEGG:ns NR:ns ## COG: ECs0516 COG0845 # Protein_GI_number: 15829770 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 6 402 7 395 397 292 46.0 8e-79 MSAKLWAPALTACALATSIALVGCSKGSDEKQQAAAAQKMPPAEVGVIVAQPQSVEQSVE LSGRTSAYQISEVRPQTSGVILKRLFAEGSYVREGQALYELDSRTNRATLENAKASLLQQ QANLASLRTKLNRYKQLVSSNAVSKQEYDDLLGQVNVAEAQVAAAKAQVTNANVDLGYST IRSPISGQSGRSSVTAGALVTANQTDPLVTIQQLDPIYVDINQSSAELLRLRQQLSKGSL NNSNNTKVKLKLEDGSTYPIEGQLAFSDASVNQDTGTITLRAVFSNPNHLLLPGMYTTAQ IVQGVVPNAYLIPQAAITRLPTGQAVAMLVNAKGVVESRPVETSGVQGQNWIVTNGLKAG DKVIVDGVAKVKEGQEVSAKPYQAQPANSQGAAPNAAKPAQSGKPQAEQKAASNA >gi|333032606|gb|GL891820.1| GENE 41 42619 - 45795 3208 1058 aa, chain + ## HITS:1 COG:CC0807 KEGG:ns NR:ns ## COG: CC0807 COG0841 # Protein_GI_number: 16125060 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Caulobacter vibrioides # 1 1047 2 1034 1051 1203 61.0 0 MAQFFIHRPIFAWVIALVIMLAGILTLTKMPIAQYPTIAPPTVTIAATYPGASAETVENT VTQIIEQQMNGLDGLRYISSNSAGNGQASIQLNFEQGVDPDIAQVQVQNKLQSATALLPE DVQRQGVTVTKSGASFLQVIAFYSPDNNLSDSDIKDYVNSSIKEPLSRVAGVGEVQVFGG SYAMRIWLDPAKLTSYQLTPSDIATALQAQNSQVAVGQLGGAPAVQGQVLNATVNAQSLL QTPEQFKNIFLKNTASGAEVRLKDVARVELGSDNYQFDSKFNGKPAAGLAIKIATGANAL DTAEAVEQRLSELRKNYPTGLADKLAYDTTPFIRLSIESVVHTLIEAVILVFIVMFLFLQ NWRATIIPTLAVPVVVLGTFAVINIFGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM SEDHTDPVTATSRSMQQISGALVGITSVLTAVFVPMAFFGGTTGVIYRQFSITLVTAMVL SLIVALTFTPALCATILKQHDPNKEPSNNIFARFFRSFNNGFDRMSHSYQNGVSRMLKGK IFSGVLYAVVVALLVFLFQKLPSSFLPEEDQGVVMTLVQLPPNATLDRTGKVIDTMTNFF MNEKDTVESIFTVSGFSFTGVGQNAGIGFVKLKDWSKRTTPETQIGSLIQRGMALNMIIK DASYVMPLQLPAMPELGVTAGFNLQLKDSSGQGHEKLIAARNTILGLASQDKRLVGVRPN GQEDTPQYQINVDQAQAGAMGVSIAEINNTMRIAWGGSYINDFVDRGRVKKVYVQGDAGS RMMPEDLNKWYVRNNKGEMVPFSAFATGEWTYGSPRLERYNGVSSVNIQGTPAPGVSSGD AMKAMEEIIGKLPSMGLQGFDYEWTGLSLEERESGAQAPFLYALSLLIVFLCLAALYESW SIPFSVLLVVPLGVIGAIVLTYLGMIIKGDPNLSNNIYFQVAIIAVIGLSAKNAILIVEF AKELQEKGEDLLDATLHAAKMRLRPIIMTTLAFGFGVLPLALSTGAGAGSQHSVGFGVLG GVLSATFLGIFFIPVFYVWIRSIFKYKPKTINTQEHKS >gi|333032606|gb|GL891820.1| GENE 42 45792 - 47249 552 485 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 19 468 11 459 460 217 32 1e-55 MMQKVWSISGRSIAVSALALALAACQSMRGPEPVVKTDIPQSYAYNSASGTSIAEQGYKQ FFADPRLLEVIDLALANNRDLRTATLNIERAQQQYQITQNNQLPTIGASGSAIRQVSQSR DPNNPYSTYQVGLGVTAYELDFWGRVRSLKDAALDSYLATQSARDSTQISLISQVAQAWL NYSFATANLRLAEQTLKAQLDSYNLNKKRFDVGIDSEVPLRQAQISVETARNDVANYKTQ IAQAQNLLNLLVGQPVPQNLLPTQPVKRIAQQNVFTAGLPSDLLNNRPDVKAAEYNLSAA GANIGAAKARLFPTISLTGSAGYASTDLSDLFKSGGFVWSVGPSLDLPIFDWGTRRANVK ISETDQKIALSDYEKSVQSAFREVNDALATRANIGERLTAQQRLVEATNRNYTLSNARFR AGIDSYLTVLDAQRSSYAAEQGLLLLQQANLNNQIELYKTLGGGLKANTSDTVVHQPSSA ELKKQ >gi|333032606|gb|GL891820.1| GENE 43 47359 - 47706 461 115 aa, chain + ## HITS:1 COG:AF0869 KEGG:ns NR:ns ## COG: AF0869 COG0393 # Protein_GI_number: 11498475 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Archaeoglobus fulgidus # 1 101 5 105 108 112 52.0 2e-25 MLLSNLESVPGHQILKQLDVVYGSTVRSKHVGRDLMASLKNIVGGELTGYTELLEESRQE AMQRMIVKAQQLGANAIVGIRFSTSNIAQGASELFVYGTAVVVQPAPHLPDPFSA >gi|333032606|gb|GL891820.1| GENE 44 47714 - 48148 382 144 aa, chain + ## HITS:1 COG:PM1668 KEGG:ns NR:ns ## COG: PM1668 COG0393 # Protein_GI_number: 15603533 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pasteurella multocida # 64 142 25 104 107 59 40.0 2e-09 MDNLIFQLVIFLILFSIGWAFGRHIERKHLNELLEKEQQFAHIRIDTNRFATSDQLGHFI SSNVVISHDYFKYVLASIKNVLGGRLSSYESIVERARREAIVRLKQQAHSVGANHIMGVR LSTTELGMQGGMVEVFAYGTAVKD >gi|333032606|gb|GL891820.1| GENE 45 48145 - 48579 308 144 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02992 NR:ns ## KEGG: ACICU_02992 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 144 1 144 144 287 100.0 8e-77 MDQDYHRILEVITRFQLVFDQKNWDAFDELLADQLEVDYLQFRGEPLCVVSCHEFKGSRQ QALSHLRLQHNLSNPLIRIEQDRAWLECNYQIYRFSENDYFHSFGRYYFTLAKQQDKWKI TGICQHLTKNIGNPRIHFSAMGQC >gi|333032606|gb|GL891820.1| GENE 46 48634 - 49440 889 268 aa, chain - ## HITS:1 COG:L142816 KEGG:ns NR:ns ## COG: L142816 COG1028 # Protein_GI_number: 15673291 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Lactococcus lactis # 11 193 3 180 270 124 38.0 2e-28 MAKLDTLQNKVVWITGASSGLGKALAGEFALQGVQVILTSRRFEELEEVRVGLLHPDQHL SVVADITNQQQVQEAYEQILKAKGRIDWLINNAGLSQRALIQDTTMETERAIMEVDYFSQ VALTKTVLPTMLKQKSGRVVFVSSVAGLLGTQYRASYSAAKAAIHMWANSLRAEVSDQGV EVSVIFPGFVKTNVSFNALNGAGQPQGHQDEAIENGLEADVFAEQSVKALMQGQEYIVVG GTKEKLGVMVSRMSPKLLYKMIRKTKVK >gi|333032606|gb|GL891820.1| GENE 47 49466 - 50143 476 225 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02994 NR:ns ## KEGG: ACICU_02994 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 225 1 225 225 404 100.0 1e-111 MSYKVFLKISDSTYTQFASIREKLHAGVRESQSKVLGDVLSDLSCEIIEQVFSVLLKDEQ DNSTMTEKQRYESEKVLQQILDTFRKYMPWSVSFFGNERLLPLVDYMTSLMKEREQEVYI TYPITPQLVQQAQTLTEQIREGNMQSVEKAFQTLIQIVDLGVTSLVREPKKRLKFNLVVD KTLNGVINMTTHLGYKRLEKLGMQVDQTTATHYINHFLAFMHQAA >gi|333032606|gb|GL891820.1| GENE 48 50340 - 53219 3182 959 aa, chain + ## HITS:1 COG:PA3834 KEGG:ns NR:ns ## COG: PA3834 COG0525 # Protein_GI_number: 15599029 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 13 959 4 950 950 1287 64.0 0 MTDAQTAQNIATTYDPTEIEKKWYKTWEEQGYFKPSGHGESFCIMIPPPNVTGSLHMGHG FNNAIMDALTRYNRMMGKNTLWQPGTDHAGIATQMVVERQLGLQGITRHDLGREKFIEKV WEWKEQSGGTITKQIRRLGSSVDWSRERFTMDEGLSNAVKEVFVRLHEDGLIYRGKRLVN WDPKLQTALSDLEVESKEEKGSLWHFKYFFEDKSVKTQDGKDYLVVATTRPETLLGDTAV AVHPEDERYAHLVGKNIVLPITGRLIPIVADDYVEKDFGTGCVKITPAHDFNDYELGKRN SLPIINIFNKNAEVLGEFEYIAKAGEQISKTITAPADYAGLERFEARKKLVAQAEAEGWL DQIQPYDLKAPRGDRSGVIIEPLLTDQWYVKIAPLAEPAIEAVQDGRIKFVPEQYSNMYM AWMRDIQDWCISRQLWWGHRIPAWYDADGNIYVGRSEEEVRAKNNIAADVELKQDEDVLD TWFSSALWTFSTLGWPEQTPELKTFHPTDVLVTGFDIIFFWVARMIMMTMHFMKNEDGSS QIPFKTVYVHGLVRDGEGQKMSKSKGNVLDPLDLIDGIDLESLVAKRTTGLMNPKDAAKI EKSTRKEFPEGINAYGTDAVRFTFCALANTGRDIKFDLKRVEGYRNFCNKIWNATRFVLM NVEGQTVGQEARPDLWELPEQWIISRLQKAEAAVHQAFATYRLDLAAQAIYDFIWNEYCD WYVELTKPVLNDAEVSEERKAEVRRVLLAVMEASLRLAHPLMPYLTEEIWQTLAPMLGQG GPTIMTAQYPIPEQAKINEQAEADMQWLQGLIGAVRNIRGEMGLGNARLLPVLLQNISNA EREQITRIEALFKALAKVESIEFLGKDQEPPLSSSSVVGHASVFVPMKGLIDPKAELGRL QKDLDKIQKQHDQIANKLANEGFVSKAPAAVVEGEKAKLAEFAAQLDKVKANMEQIAAL >gi|333032606|gb|GL891820.1| GENE 49 53276 - 53860 426 194 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02996 NR:ns ## KEGG: ACICU_02996 # Name: not_defined # Def: putative tellurite resistance protein-related protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 194 1 194 194 367 100.0 1e-100 MNEKLIQLSKELKHRPILEKALGYFPNLPLVAIDCGCGAGNESAYLLSKGFNVHAFDISI DAQKVCTDRFKDDSKFIFYHESFEDFNFPSSSLIIASSSLFFCNPSYFYSVIKRMINALS EGGILVVDLLGIYDEWVIREPTKFIGFTYQDIADLFLCDFNLLFHKEINENLPLLEGYIK TWHLHMLILQKSDF >gi|333032606|gb|GL891820.1| GENE 50 53998 - 55014 903 338 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02997 NR:ns ## KEGG: ACICU_02997 # Name: not_defined # Def: DnaJ domain-containing protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 338 1 338 338 390 100.0 1e-107 MSFDLKVSLQQRSEPSAQQKKLNRLIDKIEQQKVSLSTWQNAQAEIQQYIRQKLMPVYND LHTVLFQQLEQLWNILHSHEFSKADIQQLDEKIAQLAQMLKRSKMLSAEQVDLVKQIDNF YQQHAAESAKKNRKAQSIKSEYEESVDQGLELEEDFERYAAEQQQARKQAKQQRQQQKRE QAEQMAAQSLKTVYLKIAAMIHPDREQDETKKEEKTELFQQASQAYEKQDLFYLLKLQLQ LEQNKGLGAKELSAEQLRFYKLALDAQSQQLESQIAEILDSFQLAKNVKVEHVHISDVYK AVDADCAELKQQLKWEKERLKHMKKVSGVEMLLGHGVL >gi|333032606|gb|GL891820.1| GENE 51 55109 - 56014 704 301 aa, chain - ## HITS:1 COG:PA5466 KEGG:ns NR:ns ## COG: PA5466 COG0679 # Protein_GI_number: 15600659 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 1 293 11 303 314 213 43.0 5e-55 MNSIVLSLFPLVALIASGYLFKKYRFFSDEFWAGAEKLNYYILFPALLFSTLSTAKIDLQ SLSTAIIAMLVVVLAVTAFLYILRMFWHIPPARFGVHVQSMVRFNTYIGLALVTSLFKSE GMAILAILLALCIPLVNVISVLALTSKEHMAIKPVLIALLKNPLIASCVIGAVVNALHIP IWEGFTQFIKLFSVSSLPLGLLCVGAALQFMQIKKDIVVLAADTFARLLAVPALAYMVCM WFDLPSLQTQILVIFFALPTASASYILTKVLGGDSQLMAAVISFQTLCTAVTLPLVIWWI S >gi|333032606|gb|GL891820.1| GENE 52 56131 - 57015 210 294 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 241 1 243 305 85 25 6e-16 MTFTQLEIFALIAELKSFTATAEKLGISQSAVSHALKSLEQQWGINLISRTQSDIELTTT GQQLLTHVKELLSISDTLEKEVAAIHGLNEGTLRIGSFGASSSIYLLPEILEAFRQCYPK IEIYIDEGEDKEVAQWLLERRIEVGFLIMPDERFDTFPLIEDRFVALIPSGYPLAQQLYI DPAQLENCPFIMTMAGSRHQVELILKNFNVKPDIKFYVSQILSIVSMVHNQLGISIVSDM VITKELLSLYPNVVKRPFKPNLKRSIGLAVKNKKHISPAVKAFIEVAQEVWSDH >gi|333032606|gb|GL891820.1| GENE 53 57318 - 58505 1167 395 aa, chain + ## HITS:1 COG:PA3039 KEGG:ns NR:ns ## COG: PA3039 COG0004 # Protein_GI_number: 15598235 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Pseudomonas aeruginosa # 5 392 74 460 460 481 70.0 1e-136 MQNVDLFFLLLGAVLVLAMHAGFAFLELGTVRHKNQVNALSKILTDFALSAIAYFFVGYY ISYGQHFFHDGTVLSNDHGYNLMRCFFLLTFAAAIPAIISGGIAERAKMRSQAIATLALV ALVYPFFEGMVWNGNYGLQKWLETTFGAAFHDFAGSVVVHAMGGWIALAAVILLGARSGR YKKDGRVSAHPPSSIPFLALGSWILIVGWFGFNVMSAQRVDAISGLVAINSLMAMVGGTI TANAIGKNDPGFLHNGPLAGLVAICAGSDIVHPVSALVIGGAAGAMFVYLFTYTQNKLKV DDVLGVWPLHGVCGAFGGIAVGIFGQKWLGGLGGVSFISQLIGTALAIAIALAGGFIVYG ILKATIGIRLSQEDEFRGADLSIHKISANSEEGMF >gi|333032606|gb|GL891820.1| GENE 54 58757 - 59356 412 199 aa, chain + ## HITS:1 COG:PA4382 KEGG:ns NR:ns ## COG: PA4382 COG3907 # Protein_GI_number: 15599578 # Func_class: R General function prediction only # Function: PAP2 (acid phosphatase) superfamily protein # Organism: Pseudomonas aeruginosa # 9 193 47 236 264 108 32.0 6e-24 MYLIQPWIDSTGHFFNRDNWYLERLNHEIVKQIITAVYVIFFGLWLASFKLKKLKPYRWQ YGYMFFVSMLGSSIVGLIKSQSAHACPWNMVHPNTLGSYIWDFSAKHGHCFPGGHASAGF ILMTGYFVYRLEQPKRAYFYLFSGILLGFMMGWAQMMRGAHFLSHNLWTGWVVWAINILF YAICIHRFEFEKQVKQELT >gi|333032606|gb|GL891820.1| GENE 55 59357 - 60691 1327 444 aa, chain - ## HITS:1 COG:RSc3403 KEGG:ns NR:ns ## COG: RSc3403 COG0642 # Protein_GI_number: 17548120 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 96 434 103 443 446 192 36.0 8e-49 MHYSLKKRLIWGTSIFSVILGCILIFSAYKVALQEVDEILDTQMKYLAERTAEHPLKTVS SKFDFHKTYHEEDLFIDIWAYKDQAHLSHHLHLLVPPVEQAGFYSHKTAQGIVRTYVLPL KDYQIQVSQQERVREAFAWELAGSMFIPYLIILPFAIFALAAIIRRGLKPIDDFKNELKE RDSEELTPIEVHDYPQELLPTIDEMNRLFERISKAQNEQKQFIADAAHELRTPVTALNLQ TKILLSQFPEHESLQNLSKGLARIQHLVTQLLALAKQDVTLSMVEPTGYFQLNDVALNCV EQLVNLAMQKEIDLGFVRNEPIEMHSIEPTVHSIIFNLIDNAIKYTPHQGVINISVYTDP DHYACIQIEDSGAGIDPENYDKVLKRFYRVHHHLEVGSGLGLSIVDRATQRLGGTLTLDK SLELGGLSVLVKLPKVLHLHETRV >gi|333032606|gb|GL891820.1| GENE 56 60717 - 61391 751 224 aa, chain - ## HITS:1 COG:RSp1554 KEGG:ns NR:ns ## COG: RSp1554 COG0745 # Protein_GI_number: 17549773 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 3 219 5 226 246 192 44.0 3e-49 MTKILMIEDDFMIAESTITLLQYHQFEVEWVNNGLDGLAQLAKTKFDLILLDLGLPMMDG MQVLKQIRQRAATPVLIISARDQLQNRVDGLNLGADDYLIKPYEFDELLARIHALLRRSG VEAQLASQDQLLESGDLVLNVEQHIATFKGQRIDLSNREWAILIPLMTHPNKIFSKANLE DKLYDFDSDVTSNTIEVYVHHLRAKLGKDFIRTIRGLGYRLGQS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:22:33 2011 Seq name: gi|333032605|gb|GL891821.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld7, whole genome shotgun sequence Length of sequence - 103933 bp Number of predicted genes - 96, with homology - 94 Number of transcription units - 51, operones - 23 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 26 - 151 247 ## ACICU_00693 transposase 2 1 Op 2 . - CDS 153 - 854 403 ## ACICU_00694 hypothetical protein - Prom 901 - 960 5.0 3 2 Tu 1 . - CDS 1062 - 1289 161 ## ACICU_00695 hypothetical protein - Prom 1367 - 1426 7.2 + Prom 1345 - 1404 6.4 4 3 Op 1 . + CDS 1645 - 2562 603 ## ACICU_00696 hypothetical protein 5 3 Op 2 . + CDS 2555 - 5863 2111 ## ACICU_00697 putative ATP-binding protein 6 3 Op 3 . + CDS 5860 - 6702 617 ## ACICU_00698 putative phage-related protein 7 4 Op 1 . - CDS 6705 - 8618 874 ## ACICU_00699 hypothetical protein 8 4 Op 2 . - CDS 8620 - 10959 1036 ## COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system - Prom 11066 - 11125 9.7 - Term 11067 - 11112 10.9 9 5 Tu 1 . - CDS 11226 - 11537 261 ## ACICU_00701 putative chromate transporter - Prom 11559 - 11618 9.7 - Term 11643 - 11671 -0.9 10 6 Tu 1 . - CDS 11765 - 13048 1271 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 13101 - 13160 4.7 11 7 Op 1 . - CDS 13186 - 13320 149 ## 12 7 Op 2 . - CDS 13376 - 16210 3083 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 16325 - 16384 2.5 + Prom 16621 - 16680 4.9 13 8 Op 1 40/0.000 + CDS 16743 - 17459 1044 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 14 8 Op 2 . + CDS 17492 - 19141 1581 ## COG0642 Signal transduction histidine kinase - Term 19106 - 19157 11.2 15 9 Op 1 . - CDS 19164 - 19517 390 ## ABAYE3062 hypothetical protein - Prom 19538 - 19597 5.0 16 9 Op 2 . - CDS 19610 - 21031 745 ## COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - Prom 21138 - 21197 8.8 + Prom 20715 - 20774 3.7 17 10 Tu 1 . + CDS 21004 - 21081 63 ## 18 11 Op 1 30/0.000 + CDS 21459 - 22010 688 ## COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) 19 11 Op 2 9/0.067 + CDS 22017 - 22694 767 ## COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 20 11 Op 3 15/0.000 + CDS 22779 - 24566 1792 ## COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 21 11 Op 4 23/0.000 + CDS 24580 - 25089 505 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit 22 11 Op 5 12/0.000 + CDS 25086 - 26417 1626 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 23 11 Op 6 18/0.000 + CDS 26429 - 29113 3128 ## COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) 24 11 Op 7 31/0.000 + CDS 29117 - 30133 1225 ## COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) 25 11 Op 8 28/0.000 + CDS 30152 - 30694 593 ## COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 26 11 Op 9 30/0.000 + CDS 30691 - 31212 571 ## COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) 27 11 Op 10 26/0.000 + CDS 31212 - 31520 374 ## COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) 28 11 Op 11 30/0.000 + CDS 31517 - 33406 1736 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 29 11 Op 12 22/0.000 + CDS 33408 - 35006 1498 ## COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) 30 11 Op 13 . + CDS 35009 - 36505 1698 ## COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) + Term 36514 - 36561 9.1 + Prom 36522 - 36581 11.5 31 12 Op 1 . + CDS 36606 - 37241 995 ## COG0035 Uracil phosphoribosyltransferase + Prom 37275 - 37334 3.1 32 12 Op 2 . + CDS 37358 - 37651 354 ## ACICU_00723 putative cold shock protein - Term 37586 - 37619 -0.2 33 13 Tu 1 . - CDS 37671 - 38558 193 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 38598 - 38657 2.6 + Prom 38562 - 38621 3.8 34 14 Tu 1 . + CDS 38645 - 39406 764 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 35 15 Tu 1 . - CDS 39454 - 39876 476 ## ABAYE3042 hypothetical protein - Prom 39901 - 39960 7.2 + Prom 39984 - 40043 7.3 36 16 Tu 1 . + CDS 40166 - 40393 276 ## ABBFA_002843 hypothetical protein + Term 40412 - 40467 11.4 + Prom 40456 - 40515 2.5 37 17 Tu 1 . + CDS 40621 - 42297 1917 ## ACICU_00728 hypothetical protein + Term 42357 - 42392 5.0 + Prom 42319 - 42378 3.5 38 18 Tu 1 . + CDS 42426 - 42596 229 ## ABBFA_002841 hypothetical protein - Term 42539 - 42571 -0.9 39 19 Tu 1 . - CDS 42609 - 43808 1186 ## COG2081 Predicted flavoproteins - Prom 43847 - 43906 5.1 40 20 Op 1 . - CDS 43926 - 44807 818 ## COG2515 1-aminocyclopropane-1-carboxylate deaminase 41 20 Op 2 19/0.000 - CDS 44874 - 46007 1413 ## COG1566 Multidrug resistance efflux pump 42 20 Op 3 . - CDS 46048 - 47691 1515 ## COG0477 Permeases of the major facilitator superfamily 43 20 Op 4 . - CDS 47688 - 48257 614 ## ACICU_00734 TetR family transcriptional regulator - Prom 48318 - 48377 7.0 + Prom 48305 - 48364 13.5 44 21 Op 1 . + CDS 48436 - 49059 441 ## COG1280 Putative threonine efflux protein + Term 49090 - 49130 3.2 + Prom 49063 - 49122 7.0 45 21 Op 2 . + CDS 49222 - 49410 256 ## ABAYE3032 hypothetical protein + Term 49502 - 49531 0.4 - Term 49483 - 49527 6.7 46 22 Tu 1 . - CDS 49540 - 51612 2518 ## COG0143 Methionyl-tRNA synthetase + Prom 51810 - 51869 7.2 47 23 Op 1 . + CDS 51890 - 52390 732 ## ACICU_00738 hypothetical protein + Prom 52396 - 52455 2.1 48 23 Op 2 . + CDS 52536 - 53765 1366 ## COG0489 ATPases involved in chromosome partitioning + Term 53773 - 53805 4.0 + Prom 53774 - 53833 5.7 49 24 Tu 1 . + CDS 53911 - 54783 943 ## COG0775 Nucleoside phosphorylase + Term 54799 - 54843 4.0 - Term 54760 - 54801 -0.9 50 25 Tu 1 . - CDS 54814 - 55380 452 ## COG3216 Uncharacterized protein conserved in bacteria - Prom 55595 - 55654 8.9 + Prom 55465 - 55524 10.6 51 26 Op 1 . + CDS 55737 - 56330 605 ## COG1280 Putative threonine efflux protein + Term 56341 - 56383 5.3 + Prom 56352 - 56411 4.3 52 26 Op 2 . + CDS 56445 - 57014 689 ## COG0717 Deoxycytidine deaminase + Term 57037 - 57082 8.7 + Prom 57016 - 57075 6.7 53 27 Tu 1 . + CDS 57311 - 58789 1750 ## ACICU_00744 hypothetical protein + Term 58900 - 58934 2.2 + Prom 58830 - 58889 3.8 54 28 Op 1 . + CDS 59022 - 61055 1838 ## ACICU_00745 hypothetical protein 55 28 Op 2 . + CDS 61069 - 61794 659 ## ACICU_00746 hypothetical protein 56 28 Op 3 . + CDS 61827 - 64238 2363 ## ACICU_00747 hypothetical protein + Term 64248 - 64278 2.0 + Prom 64254 - 64313 6.1 57 29 Tu 1 . + CDS 64400 - 65353 716 ## ACICU_00748 hypothetical protein + Term 65386 - 65435 14.7 - Term 65374 - 65423 7.1 58 30 Tu 1 . - CDS 65433 - 66356 978 ## COG0042 tRNA-dihydrouridine synthase - Prom 66399 - 66458 3.1 - Term 66392 - 66436 8.4 59 31 Tu 1 . - CDS 66462 - 67271 785 ## COG4137 ABC-type uncharacterized transport system, permease component - Prom 67385 - 67444 4.1 + Prom 67257 - 67316 6.1 60 32 Tu 1 . + CDS 67412 - 68821 1887 ## COG0541 Signal recognition particle GTPase + Term 68827 - 68873 11.4 - Term 68813 - 68861 7.4 61 33 Op 1 4/0.067 - CDS 68871 - 69605 812 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 62 33 Op 2 . - CDS 69621 - 70373 730 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Prom 70478 - 70537 4.2 + Prom 70195 - 70254 2.8 63 34 Tu 1 . + CDS 70404 - 71207 891 ## COG0730 Predicted permeases + Term 71236 - 71278 5.6 + Prom 71211 - 71270 6.2 64 35 Op 1 1/0.200 + CDS 71456 - 72151 757 ## COG1802 Transcriptional regulators 65 35 Op 2 2/0.133 + CDS 72162 - 75611 3402 ## COG1196 Chromosome segregation ATPases 66 35 Op 3 7/0.067 + CDS 75613 - 76650 1342 ## COG3115 Cell division protein + Term 76704 - 76735 2.5 + Prom 76672 - 76731 4.2 67 36 Tu 1 . + CDS 76760 - 78781 2119 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) + Term 78795 - 78854 8.5 + Prom 78923 - 78982 8.8 68 37 Tu 1 . + CDS 79035 - 79499 694 ## COG2193 Bacterioferritin (cytochrome b1) + Term 79503 - 79552 9.7 + Prom 79502 - 79561 5.8 69 38 Tu 1 . + CDS 79740 - 80987 1276 ## COG0477 Permeases of the major facilitator superfamily + Term 81218 - 81250 1.3 70 39 Op 1 8/0.067 - CDS 81055 - 82485 1423 ## COG0380 Trehalose-6-phosphate synthase 71 39 Op 2 . - CDS 82473 - 83324 545 ## COG1877 Trehalose-6-phosphatase + Prom 83463 - 83522 9.8 72 40 Op 1 . + CDS 83680 - 84414 449 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Prom 84420 - 84479 2.4 73 40 Op 2 6/0.067 + CDS 84505 - 85785 1447 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 74 40 Op 3 6/0.067 + CDS 85787 - 86944 1064 ## COG0156 7-keto-8-aminopelargonate synthetase and related enzymes 75 40 Op 4 9/0.067 + CDS 86941 - 87690 475 ## COG0500 SAM-dependent methyltransferases 76 40 Op 5 . + CDS 87691 - 88335 763 ## COG0132 Dethiobiotin synthetase + Term 88360 - 88389 0.4 - Term 88348 - 88377 0.4 77 41 Op 1 12/0.000 - CDS 88399 - 89322 1260 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 78 41 Op 2 21/0.000 - CDS 89364 - 89960 516 ## COG1386 Predicted transcriptional regulator containing the HTH domain 79 41 Op 3 1/0.200 - CDS 89957 - 90724 883 ## COG1354 Uncharacterized conserved protein - Prom 90838 - 90897 8.4 80 42 Op 1 . - CDS 90977 - 91594 918 ## COG0009 Putative translation factor (SUA5) - Prom 91623 - 91682 3.2 81 42 Op 2 . - CDS 91684 - 92163 306 ## COG3101 Uncharacterized protein conserved in bacteria - Prom 92384 - 92443 4.2 + Prom 92147 - 92206 4.3 82 43 Op 1 20/0.000 + CDS 92443 - 93003 363 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 83 43 Op 2 . + CDS 93078 - 93263 314 ## PROTEIN SUPPORTED gi|126640872|ref|YP_001083856.1| 50S ribosomal protein L32 + Term 93298 - 93344 4.0 + Prom 93321 - 93380 4.7 84 44 Op 1 26/0.000 + CDS 93416 - 94402 1173 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 85 44 Op 2 22/0.000 + CDS 94399 - 95133 246 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 86 44 Op 3 . + CDS 95218 - 95454 393 ## COG0236 Acyl carrier protein + Term 95478 - 95513 4.2 + Prom 95493 - 95552 6.0 87 45 Tu 1 . + CDS 95645 - 96118 680 ## COG1652 Uncharacterized protein containing LysM domain + Term 96127 - 96167 10.1 - Term 96115 - 96155 10.1 88 46 Tu 1 . - CDS 96164 - 96931 1025 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 96956 - 97015 7.0 + Prom 96915 - 96974 4.7 89 47 Tu 1 . + CDS 97029 - 97703 838 ## COG0546 Predicted phosphatases + Term 97724 - 97769 3.5 - Term 97708 - 97761 0.1 90 48 Tu 1 . - CDS 97768 - 98427 764 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase - Prom 98453 - 98512 1.8 + Prom 98707 - 98766 8.6 91 49 Op 1 . + CDS 98845 - 100626 934 ## ACICU_00782 hypothetical protein 92 49 Op 2 . + CDS 100626 - 101186 542 ## COG4929 Uncharacterized membrane-anchored protein + Term 101194 - 101239 10.1 - Term 101189 - 101217 1.0 93 50 Tu 1 . - CDS 101242 - 101622 495 ## COG0853 Aspartate 1-decarboxylase 94 51 Op 1 22/0.000 - CDS 101754 - 102335 619 ## COG0193 Peptidyl-tRNA hydrolase 95 51 Op 2 9/0.067 - CDS 102356 - 102667 510 ## PROTEIN SUPPORTED gi|126640884|ref|YP_001083868.1| 50S ribosomal protein L25 - Prom 102690 - 102749 1.8 - Term 102702 - 102731 1.2 96 51 Op 3 . - CDS 102752 - 103702 1125 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 103818 - 103877 4.2 - TRNA 103739 - 103813 68.8 # Gln TTG 0 0 Predicted protein(s) >gi|333032605|gb|GL891821.1| GENE 1 26 - 151 247 41 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00693 NR:ns ## KEGG: ACICU_00693 # Name: not_defined # Def: transposase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 41 1 41 628 90 100.0 2e-17 MTIPDFIPQVGLRFSFKDTNFEVTYVHNNVVRFSAVDGGKT >gi|333032605|gb|GL891821.1| GENE 2 153 - 854 403 233 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00694 NR:ns ## KEGG: ACICU_00694 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 233 1 233 233 459 100.0 1e-128 MNIFTTDAWDNFPDSLHPQIVDAFNKKPDLDGVLHGQRHISQGSVGKRTGLFSSYKNNGM IPYESQLELAHAIQLERNPSVKYYRTQALKIPISHNQFLYPDFLIKYTNEEIAFHEVKHS KRFLDQKDIERYQRLKILLAPSGITFDIVDRHDLYSDAEAKVLLHYNRRSHARNWSSFEI QFALSLLTRSTSLVKNQLMSILKNNGLPLELGEFLIFHKYIKLNTPNNKQGGI >gi|333032605|gb|GL891821.1| GENE 3 1062 - 1289 161 75 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00695 NR:ns ## KEGG: ACICU_00695 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 75 1 75 75 140 100.0 2e-32 MMRTSQEVRSELQKRGLSIADWARQNGFTPELVHQVLNSNKIPVRGKSHQIAVKLGLKDG IIEPDFTFEKMKETQ >gi|333032605|gb|GL891821.1| GENE 4 1645 - 2562 603 305 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00696 NR:ns ## KEGG: ACICU_00696 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 305 1 305 305 620 100.0 1e-176 MKPMFSGHETFPLRQLWLKKAYHQVFKFYEADSDYAPKTVFSAPDAIERFGVGKNMVAAI KHWALACDVIREHTDKNGFEIGEIGYLLFDEKSGVDQYLESEATLWLLHWLLAGRARRTA TIYSIYNFIQNQTFTELEVKKLISDLALSNQKGRSDVTLSTDITTSMKCYFSSHDTEDNI EPLLAGIGLLSEISKGQYRFNRGNQYSLPDQVFAFALLDFWEQWELITNTSQKTLSFNLI AHDYGSPGRVFKLDESAVGDRLSRISEITNNYLQWTDSSGIRQVSRIGTETWGSVKMRIL RGAYE >gi|333032605|gb|GL891821.1| GENE 5 2555 - 5863 2111 1102 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00697 NR:ns ## KEGG: ACICU_00697 # Name: not_defined # Def: putative ATP-binding protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 1102 1 1102 1102 2202 100.0 0 MSKKLSELVSVHRNFLRSIRLDTDLGRADAISGYILQSPAKQLLDITGSYLLESQQKAFT WTGPYGGGKSSLALTLASCVNEKKDIRDLSRSILGDEINVGIKQYFYTDEPWIVLPIVGK KTSIESQIQATLNSIDEQYKSLINQEDSVINQLVKLAEVLPKKSGVLLLIDELGKFLEYA AYSGEDIGFYQDLAEAAARCKGNLVIIGILHQSFEQYAAKLGSNVQQEWAKVQGRYIDIP LVTNTDETLELIGKAIHVETQYEEARKVAENVSKVIHKRRPSAVSNLSVLLEACWPLHPV MAVMLGPASRKKFGQNERSIFSFLTSVEPLGFSEVLQGMDGEIFDYYWPHQFWDYLRGNF EQAILASVDGHRWSISVDAIERAEAIFSNVHVNLVKTIALIEIFRNGSGLVAEDQLLNCS VPNASITEIHDALNDLARASILIFRKHIGAWGVYAGSDFDIEAALNTATSNVLDVDYKEL KNTLAFTPITARRHYWNTGAMRWLNCSIISEREVKKHIDSFQTQGSAFGEFLLVIPDIIV KDKDEIGKNEQLVSKAFAKGVLIGFPKNGDNIQGLAKELASLEFIRNNSLKLHSDSIAMR EVLARIQLVKQTLNDELKYAFNNCLWQWGKQTFTGSLSKIASDLADQIFNLSPKVSSELV NRNTLSASAVKAQKDLLRALLANDNIENLGFENMSAAASLYRTTIKAFNIHRYQNDTWQI CAPEAEFDPCNIVGVWNGIKDFIRKAKGVVNLSEIFDLLSKAPFGVKKGLQPILVWAFFI SYKQYIAVYTDGMFTPDLNETSIDEWLQSPKRISWRFVELKTSEKKMLKLLANSLSSQLS YPVKVEPLDSARALVSIVFGLPAWTRKTNSLSKEAKVIRDMLLHASDPHKVLFTDLPAVF ESTNAELIVERTSEVINELISIFEIRLRKIEKNLLTALDQQNINLDLLHLRAKNISGIGA EFRLEAFITRMASYSGYTHELEGLLMLALGKPSDTWTDHDIDAGELQLIAWATEFRRLEV FASIREREPTRQAIGIVLGGKQTITGSFDVSEHDANDIEGLSKQLIKALENGQYKKEVFL AALVDAGSKVIQELQHINGGEA >gi|333032605|gb|GL891821.1| GENE 6 5860 - 6702 617 280 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00698 NR:ns ## KEGG: ACICU_00698 # Name: not_defined # Def: putative phage-related protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 280 1 280 280 577 100.0 1e-163 MTEHHVLGLSGGKDSAALAIYMRQNFPELKIRYFFTDTGKELPEVYEFLAKLEGFLGQKI EYINGDRDFDFWLRQYNNFLPSAQTRWCTRQLKLTPFKKWIKPWLDQGDKVYSYVAIRAD EDHRQGLVSQHKNLEVKLPFREHGIDKPGVYDLLESSGIGLPAYYEWRSRSGCTFCFFQQ KIEWARLKERHPKAFEDAKAYEKTAIDSGSPFTWTRGESLSDLEKPERLAQIYKDYELRK QRAMHRKPVNPLRPQRIDTIDIDDLYLEDEGAGACLVCHK >gi|333032605|gb|GL891821.1| GENE 7 6705 - 8618 874 637 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00699 NR:ns ## KEGG: ACICU_00699 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 637 1 637 637 1213 100.0 0 MKPTSQPSKKKILIIDDEIEGISLKKALTTAKTFFEALRDPDSEIREEMDNFLNKHQNQF QNKLETDGTVHEAFFKEVILSDSFKNSLSTVSLTYKSLSSLYQENEWLLRIKGLITKAFP TDVYDVKYLENVDNINIDELDQFDLLIVDWFLENGYSQSSDLLLKLSEKDNLPAIILLTS HENILESNTKSDFYIKTRISGAGLTILIKKEIRAESFGYIGLRMLAEKAIKQRPIANASR HYIKQWENVLESAKQNTIKSLWQLDTFIMKSIHTDAISDSQPYSNHFHDFISREHSWHME TNTTLNTYAENLGTALNEHNYNDLLTHHSNEDSITLHRELLQHYSFQGGVNTFKIHDITK DELQQKILEKLPFGAVLVHGDNSTSDSYEAFVNITQPCDLSGLIRNQPNNSLIFMTLSLK KRLVKNSMFFDTSTYHIYGLTLNDTLYDMIPKNKQLVGINFNEFYQKFNNYKLVGVLRND ITMSLQQSTAASIIRPSQPRTNRPCFGLAKLFLISCSSTGEKKCISFPNEIEFLGSTYKL DKTKNLIQIIGNNLASAAFWVCQELEFQDNSDEFNNTYRLFHESIDISKPSNISHQTTVR MLPVDSFDDHSQAIQGIQDKIHRNKNTICLTYEKFHD >gi|333032605|gb|GL891821.1| GENE 8 8620 - 10959 1036 779 aa, chain - ## HITS:1 COG:PA1336 KEGG:ns NR:ns ## COG: PA1336 COG4191 # Protein_GI_number: 15596533 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase regulating C4-dicarboxylate transport system # Organism: Pseudomonas aeruginosa # 532 748 387 597 633 67 27.0 8e-11 MSHSFKVAARTLRHLGGELITSDEMALNELIKNAFDAGSKRVKVFINYPMNLAVLSKTLE DFTSLKINKNKALELIEINTKLYINPLNTAPLSTFLTYIDQVLNTINEQNKPNILSEIKD NFYNIKICDTGHGMTESELESVFLTIGTPSKLSQKSNGDRILLGEKGIGRLSMMKLGNKA TVITKTIDDQICNSISFNWQDFDNPDLYLDEITIETQKINYPETFITGTQIHITELLSDW SLKKTEIFVKEYIQRLRSPFREGKSDFPIDILLNDTRLNITPIPSWLKEQSSLQAEYIFE PSQINSALHGSLIWKDSSAPDIRSWSIDDLSRILNTSSSQLNLLGPLKIKFLWFNRKDLI GTIERSLKNIKEELNLWVGGFSIYRDGFRIGFTGGLNDDWLKMDSKALKSQGYTFNRYQT VGEISISKIKNPNLKDTASRQSLVNNNEFELLQDLISEIIIKDTKSRIEDRKKILEIVAT DAFIKSLDKSDESYKKASEALNTLSKNGSQEDKDIIDMAQNVMKNQNELINQLNAKMEKA FETNTDILELANLGQMVDIIAHELARITENTSNLLIRLKNSEDNKEETSNIMNELRKQII ATEKRIRSIDVLSPAVRQRKESYDITAQFKTILEGYAPKLQRHNINYKITVDDSSELKPV QVTMVRGLVAQIMENLLTNSVYWLDQGLKIGEKEKLIELNIESDTKIIYIRDNGPGVDPA YHLDIFKPYFTNRRGGKGLGLYIAAEIAKYHESKLYLSNEIEQDGKLRTFIIELPKSSI >gi|333032605|gb|GL891821.1| GENE 9 11226 - 11537 261 103 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00701 NR:ns ## KEGG: ACICU_00701 # Name: not_defined # Def: putative chromate transporter # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 103 1 103 103 176 100.0 3e-43 MQYNYKSLWLIAAIAFFAIFVLNLPFPLIVLTAGLTGYFTSKKYPELFSSNAGHKKSQKD YGIALIDDDTLTPDHAKFRGLHLVKILIIAALLWFIPVLGLDR >gi|333032605|gb|GL891821.1| GENE 10 11765 - 13048 1271 427 aa, chain - ## HITS:1 COG:PA1155 KEGG:ns NR:ns ## COG: PA1155 COG0208 # Protein_GI_number: 15596352 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Pseudomonas aeruginosa # 60 427 47 414 415 640 80.0 0 MSILSWDDFEDDSQKPAAPEHKSAPVNPEKTPDSQNVSATQPSSQSVAAPQSTGTHSVRS TNPTDSMARASEALEHLDVAPGLEELEMGAQRVQVDDKAMINCRADLNQLVPFKYEWAWQ KYLDGCANHWMPQEVNMNHDIALWKSENGLTEDERTIVMRSLGFFSTADSLVANNLVLAI YRHITNPECRQYILRQAFEEAIHTHAYQYCIESLGMDEGEVFNMYREIPSVARKAAWGLK YTQSLSDPTFHTGTPENDQRLLRNLIAFYCVLEGIFFYCGFTQILSMGRRNKMNGVAEQF QYILRDESMHLNFGIDMINQIKIENPHLWTAEFQQEVIQMILEGTMLEIEYARDTMPRGV LGMNASMMEEYLKFICNRRLSQLGLPEQFAGVTNPFAWMSEMMDLRKEKNFFETRVTDYQ TGGALSW >gi|333032605|gb|GL891821.1| GENE 11 13186 - 13320 149 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFFHLSHNYMLGVGILIFAFIFFYTPMVYAFFKIRKQQRKQNKL >gi|333032605|gb|GL891821.1| GENE 12 13376 - 16210 3083 944 aa, chain - ## HITS:1 COG:PA1156 KEGG:ns NR:ns ## COG: PA1156 COG0209 # Protein_GI_number: 15596353 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Pseudomonas aeruginosa # 6 944 27 963 963 1346 69.0 0 MSVITSTPGQIQVIKRTGDVAAFDAEKISVAIGKAFLAVEGQQSADSSRIHDRITQLTEM VLNTFTRRLPSGGTIHIEEIQDQVELALMRTGEHKVARAYVIYRDQRASARKDTNSNHHP TLQVTDANGQLQPLDLSALQATVNRAAEGLEGIDVQAIIDETVKNLYNGVKESDIATTMM MATRTRIEQEPNYTYVTARLLRDELVSTGLAFLGLPADTAENNALEAFLKKGVELDLLSP DLLKFDLEKLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSMGLALN EQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDDLYDIYGAMRDNA MLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGGKRKGAVCAY LETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTPSETPDLH DLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKDVCNLRSP QQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHVKGGVLDREKLARTVKTAVRML DNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQDALYEMGMAYGSDEAVNFADESMEVISY YAIQTSSDLAVERGAYSTFKGSLWDQGILPIDSLEIVAKSRPERMFEVDRTQRLDWDSLR AKVQKDGMRNSNVMAIAPTATISNICGVSQSIEPTFQNLYVKSNLSGEFTVINPYLVRAL KERGLWDTVMVNDLKHFEGSVQKIARIPEELKAIFATAFEVEPRWIVDAASRRQKWIDQA QSLNLYISGANGKKLDITYKMAWLRGLKTTYYLRALGATSAEKSTINTGALNAVKPATVE AAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMACSIDNPDCEACQ >gi|333032605|gb|GL891821.1| GENE 13 16743 - 17459 1044 238 aa, chain + ## HITS:1 COG:PA1157 KEGG:ns NR:ns ## COG: PA1157 COG0745 # Protein_GI_number: 15596354 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 4 234 2 235 236 291 68.0 9e-79 MSQEEKLPKILIVEDDERLARLTQEYLIRNGLEVGVETDGNRAIRRIISEQPDLVVLDVM LPGADGLTVCREVRPHYHQPILMLTARTEDMDQVLGLEMGADDYVAKPVQPRVLLARIRA LLRRTDKTVEDEVAQRIEFDDLVIDNGGRSVTLNGELVDFTSAEYDLLWLLASNAGRILS REDIFERLRGIEYDGQDRSIDVRISRIRPKIGDDPENPKRIKTVRSKGYLFVKETNGL >gi|333032605|gb|GL891821.1| GENE 14 17492 - 19141 1581 549 aa, chain + ## HITS:1 COG:PA1158 KEGG:ns NR:ns ## COG: PA1158 COG0642 # Protein_GI_number: 15596355 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 128 532 38 444 452 298 41.0 2e-80 MFKHSIFLRIYAGLVILVVLVAVFGYLLVQIINYQRAQEYRESLTDGISYVISEGVARQP GKQQKIDWISDASDLLELPIYYTDASKVELSRTEKKRIEAQKSVVRYDASNSIAYVIIGL RDDPQHYLSIKVDKITERQMKALPIFVLDYLMFYPGQEQEYLAKIQKHFSYPINIQNIQD VNLDSEQIGRLRQDQSVMLYKDSATVRGTTISIVSPIPNHPAQVLVLGPVPMFNWMPLQL SAGITLFSLFLLSLGVYGLILPLERKIRQVRYALNRMKSGDLSLRVPIEGSDEMANLASS YNNMSDHIQRLIEAQRELMRAVSHELRTPVARIRFGTEMLAEEDDYNHRMHQVDMIDKDI EALNTLIDEIMTYAKLEQGTPSLDFAEIVLFEVLDQVAVETEALKTQKEIELIPPPLYVK VDAERRYLHRVVQNLVGNAVRYCDNKVRITGGIHNDGMAFVCVEDDGPGIPEQDRKRVFE AFARLDDSRTRASGGYGLGLSIVSRIAYWFGGEIKVDESPSLGGARFIMTWPAHRFKQPP LKTNKKAPA >gi|333032605|gb|GL891821.1| GENE 15 19164 - 19517 390 117 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3062 NR:ns ## KEGG: ABAYE3062 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 117 1 117 117 216 100.0 2e-55 MNLEYTHKPDYYLFAQLLVRHIESYIHKHPDADNAIFDLRDVYEIFRQDFASTTTNLEGI LHIADSYRVETLNGDQPLIQKYQIDAKNNSLLIDFNTDALNSLRSGKPILEPDATQL >gi|333032605|gb|GL891821.1| GENE 16 19610 - 21031 745 473 aa, chain - ## HITS:1 COG:RP237 KEGG:ns NR:ns ## COG: RP237 COG3706 # Protein_GI_number: 15604107 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing a CheY-like receiver domain and a GGDEF domain # Organism: Rickettsia prowazekii # 297 469 277 447 450 132 41.0 2e-30 MPYSLREFSFSTSLKFFLLFTIIITLCCFIGIASRPLSFLAFFWPANSVFLGLLLRFPQT RQIGSFAGAFTGYMIADLVNGTPLFLTLILTISNYLYVVTTLALAILFNRHIKAAYQGYS YLLLFALCGIGSITGALFAATFVPMFNTKFMIGSFWAEFGYWVTSELQNALLLLPIILNI PPYLKIKNHLKGNRIYIKAIDFLPLFAVLISIGVSYYDSGPGSLLYPIAALIWCAIRYKP IIVALITSFTSAYIIYHVSGHYLLLYPQDYLGNTISIRIGLIMMTVAPLTVSSISALHSE LIQKLQHAIAHDELTSSLTRRQFLQSVRLLQEKVQKENKTSAFFMLDVDHFKKVNDSYGH LIGDRALQTCVTTIQNILHPHDLLGRFGGEEFAIFIPDTTREAAFELAERIRIQISQQPI YVYGKLPIFVQVSIGISLYSPSYHRSIESLFKEADDALYQAKRQGRNRVFISL >gi|333032605|gb|GL891821.1| GENE 17 21004 - 21081 63 25 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIHEVSMASAALNDKHSYPRVIKY >gi|333032605|gb|GL891821.1| GENE 18 21459 - 22010 688 183 aa, chain + ## HITS:1 COG:PA2637 KEGG:ns NR:ns ## COG: PA2637 COG0838 # Protein_GI_number: 15597833 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 3 (chain A) # Organism: Pseudomonas aeruginosa # 2 127 5 130 137 139 56.0 3e-33 MSAITPYDWAIIAFVIGVTFLCVFMLTVPLLLGGKSWGRAKQEQFESGVVSAGGARIRLS AKFYLVAIFFVVFDLEALYLYAWSTSVREVGWLGYTTVVIFVVDLLIALVYAFSVGALSW APADRRKLAGEKIKVGSPTMNIAEITRFNSIEELVTDPTGQIPAQSSGRVKSKTTPALSS EKE >gi|333032605|gb|GL891821.1| GENE 19 22017 - 22694 767 225 aa, chain + ## HITS:1 COG:STM2327 KEGG:ns NR:ns ## COG: STM2327 COG0377 # Protein_GI_number: 16765654 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases # Organism: Salmonella typhimurium LT2 # 1 224 1 220 220 347 74.0 1e-95 MKYTLTRANPDADQYPLQDRQIVTDPLEEEVNKNVFMTRLEDVLHTAVNWGRKNSLWPFN FGTSCCYVEYATTLTGVHDLSRFGAEVIRASPRQADLMIVAGTCFVKMAPVIQRLYEQML EPKWVISMGACANSGGMYDIYSVVQGVDKIIPVDVYVPGCPPRPEALIQALMLLQDQIQL ERRPLSAVIGDDLQPVYKPKMMPERDRKNAQRIAVKNLRSMDEIK >gi|333032605|gb|GL891821.1| GENE 20 22779 - 24566 1792 595 aa, chain + ## HITS:1 COG:YPO2553_2 KEGG:ns NR:ns ## COG: YPO2553_2 COG0649 # Protein_GI_number: 16122771 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 49 kD subunit 7 # Organism: Yersinia pestis # 198 595 1 398 398 645 71.0 0 MAETDIAMPESTPVDSRPAFAIVEELKTKFGENFYVQATFEEFPTVWVERARVQEVLMFL RKVERPYVMLFDLSAMDERLRQHRDGLPASDFTVFYHLLSLERNSDIRIKVALNENDLNL PTATNIWPNANWYEREAYDMFGINFEGHPMLRRILLPTYWEGHPLRKEYSARATEYTPYM QDKAKQDFEQEHLRFVPEDWGLKRGNADEDFMFLNLGPNHPSAHGAFRIVLQLDGEEVKD CVPDIGYHHRGVEKMAERQTWHSFIPYTDRVDYLGGCAQNMPYVMAVEQLAGIKVPERAQ VIRVMLNELFRINNHLLYCGTAIQDAGGMTPVFYMFADRQKVYDIVEAITGYRMHPAWFR IGGTAHDLPNNWQKLVKELLDWMPKRLNEYYTAAFKNSVFIGRTRNVAQYDAKSALAWGV TGTGLRATGIDFDVRKYRPYSGYENFDFEVPVEYEGDAYARVLVHFREIEQSLKIIKQCL DNMPSGPYKADHPLAVPPPKDKTLQDIETLITHFLSVSWGPVMPAGEASFMTEVVKGAST YYLTSDKATMSYRTRIRTPTFTHLQQIPSVINGSLVSDLIIYLATIDVVMADVDR >gi|333032605|gb|GL891821.1| GENE 21 24580 - 25089 505 169 aa, chain + ## HITS:1 COG:PA2640 KEGG:ns NR:ns ## COG: PA2640 COG1905 # Protein_GI_number: 15597836 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Pseudomonas aeruginosa # 16 169 13 166 166 194 56.0 6e-50 MMILTDKKPRVNVEGILTAEEIHEIEHHIGHYPYPRAASLDALKCVQRRNGWVDDAQMNA IAQLLTISVADLEGVATFYNRIYRQPVGRHVILLCDSIACFLMGAETLAEAFQRELGIQF GQTTQDGRFTLLPICCLGNCDKGPTLMIDEDTHGLVEVTSIKQLLEKYV >gi|333032605|gb|GL891821.1| GENE 22 25086 - 26417 1626 443 aa, chain + ## HITS:1 COG:YPO2551 KEGG:ns NR:ns ## COG: YPO2551 COG1894 # Protein_GI_number: 16122769 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Yersinia pestis # 14 429 15 432 461 575 67.0 1e-164 MNTEPKPIYGDGNPETHPLTWRLSKQESVRSADDYEALEGYAGFKKALGMKPAEVLEVIK AATVKGRGGAGFPAGIKWSLMAPNDGGPRYLICNADEMEPGTFKDRLLMEKLPHQLIEGM LIAGYTLEATQGYIFIRGEYIEAAQYLNEALEQIRAKGYLGDNILGSGWNFELHVHTGAG RYICGEETALINSLEGRRANPRTKPPFPQVAGAWGRPTIVNNVETYNNLPAIMLRGPEWY IGLSAGKSKDPGTKIYGASGKVKFPGLWELPFGTTAREVIEEHAGGMRDGLKLKAWLPGG ASTDFLPADTIDLPMDAETIMKAGSRLGTCLLMVVDETQCMVSLTRNLEEFFARESCGWC TPCRDGLPWAVKALKALETGEGKKEDIDHLQELTRKLWIGKTFCAHAPGAMEPLMGALKH FRSEFEAKVTDRPVVQTSNVEQA >gi|333032605|gb|GL891821.1| GENE 23 26429 - 29113 3128 894 aa, chain + ## HITS:1 COG:PA2642 KEGG:ns NR:ns ## COG: PA2642 COG1034 # Protein_GI_number: 15597838 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) # Organism: Pseudomonas aeruginosa # 1 879 1 886 905 1117 60.0 0 MATIHVDGKSYEVNGSENLLQACLSLGIDIPYFCWHPSLGSVGSCRQCAVTQYANPEDTR GRLVMSCMTPASDNTYISIEDKEAVDFRESIVEFLMTNHPHDCPVCEEGGHCHLQDMTVM TGHDRRRYRFTKRTHYNQELGSFIAHEMNRCIACYRCVRYYKDYAGGTDFGVYANASRVY FGRPESGTLESEFSGNLTEVCPTGVFTDKTHSERYNRKWDMQYAPSVCHGCSSGCNISPG ERYGEIRRVENRFNGSVNQYFLCDKGRFGTGYVNRADRPRQPQFRNGETVATVSVDQALD QTIAKLEGKKVLGIGSPRASLESNYALRELVGQANYSTGVAQKEQSLVELAASIMQTEGI YNPNMREIESYDAVLILGEDLTQTAPRMALSVRQVAKNKAREMAAKTRTPDWLAEPVQRI GQEAKSPIYILAATQTRLADVATGEVVASPNDIARLGFAVAAAVKGETVNGLDDDAKAFA QTIADTLKAANKPLIIAGTSLQDASIMEAAAELTQNLGSKAGLSLVVPEVNSMGLALFGG LSLEQAFAQDYDTLVIVENDLFRRLPAAQVKAALDKAETVIVLDHSETETVKQADIVLSA ASFAEGDGTVVSQEGRAQRFYQVYDPSYYKPEYAIKESWRWLHAIETGLKGKPIDWTVLD DVIETIVKNVPVLEAIQDVAPDAGYRVHGLKIAREPRRYSGRTAMRAPLSVHEPKQPTDP DSALTFSMEGYVGPQKASSLVPFAWAPGWNSPQSWNKYQDEVGGHLKGGDSGVRLFDRLA KRPARSYVAPTAVVANPESFRLVPMHHIFGSGEFTIKTPAMETRIPEAVFAVGEQDATRL NLQEGQRITVKAGETTVSLPVQVIEYLPTGYIGYPVGLAPTVSLAEPVSVALGV >gi|333032605|gb|GL891821.1| GENE 24 29117 - 30133 1225 338 aa, chain + ## HITS:1 COG:PA2643 KEGG:ns NR:ns ## COG: PA2643 COG1005 # Protein_GI_number: 15597839 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 1 (chain H) # Organism: Pseudomonas aeruginosa # 18 334 11 327 331 406 66.0 1e-113 MNQEIIRQTPLWAENWPIAYAVVQAVVILLVVVLVAALMSFIERRLLAWWQDRYGPNRVG PGGMFQIVADMLKIMFKEDWTPKFADKLTFRLAPAVAMATAVLSFMVIPVSPALGVADMS IGLLFFMAMAGIAVYAVLFGGWSSNNKYSLLGGLRSAAQTISYEVFLGISLMGVVAIAGS FNLREIVEAQRDVWFIIPQFLGFLIFVVAGVAVTHRHPFDQPEAEQELAEGYHVEYGGMK WGMFFVAEYVNVVLISALIVTLFFGGWLAPFNLEIPFVPPVFWFVIKTAFFVMMFVLARG SLMRPRYDQVMNFGWKICLPLALVNLLVTGAVILMNQA >gi|333032605|gb|GL891821.1| GENE 25 30152 - 30694 593 180 aa, chain + ## HITS:1 COG:STM2321 KEGG:ns NR:ns ## COG: STM2321 COG1143 # Protein_GI_number: 16765648 # Func_class: C Energy production and conversion # Function: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) # Organism: Salmonella typhimurium LT2 # 1 180 3 180 180 296 76.0 2e-80 MYKILAGVGSIVRTLFMVFTHGFRKRDTILYPEVPAEEIVPPRYRGRIILTRDPDGEERC VACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQLTPDF ELGEYVRQDLVYEKENLLISGPGKYPDYNFYRVTGMAINGKEKGQAQKESAPIDVRSLLP >gi|333032605|gb|GL891821.1| GENE 26 30691 - 31212 571 173 aa, chain + ## HITS:1 COG:ECs3164 KEGG:ns NR:ns ## COG: ECs3164 COG0839 # Protein_GI_number: 15832418 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 6 (chain J) # Organism: Escherichia coli O157:H7 # 1 169 1 166 184 148 53.0 4e-36 MMWPFYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYA GAIMVLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISA PLGAQVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKREPGAEEEKE >gi|333032605|gb|GL891821.1| GENE 27 31212 - 31520 374 102 aa, chain + ## HITS:1 COG:PA2646 KEGG:ns NR:ns ## COG: PA2646 COG0713 # Protein_GI_number: 15597842 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) # Organism: Pseudomonas aeruginosa # 1 102 1 102 102 130 77.0 5e-31 MGQIPLEHGLIVATILFALGFYGVMVRRNLLFMLMSLEIMMNAAALAFVLAGSVWAQPDG QVMFILILTLAAAEACIGLAIVLQFYHRFHHLDVDAASEMRG >gi|333032605|gb|GL891821.1| GENE 28 31517 - 33406 1736 629 aa, chain + ## HITS:1 COG:nuoL KEGG:ns NR:ns ## COG: nuoL COG1009 # Protein_GI_number: 16130213 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Escherichia coli K12 # 1 613 1 601 613 572 55.0 1e-162 MSYLYLTVLFPLIGFILLAAGRDKLSENVAAIIGVGSVGLSALFALIAGMAFTSSGQQVF VQNLWTWFNVGGFAPGISLHLDGLSLLMMGMITGVGFLIHIFASWYMRGEEGYARFFSYF NLFVASMLLLVLGDNLALLFLGWEGVGLCSYLLIGFYYANPANGWAAIKAFTVTRVGDVF LLIALFLLYQQFGTLNTQYIVEHAAEVMTKSSSLTIWTALMLFLGAAGKSAQIPLQTWLA DAMAGPTPVSALIHAATMVTAGVYLCCRLFSVFELAPEVMQFISVTGAVTLLVAGFAALV QTDIKRILAYSTMSQLGYMFMAVGAEAYQAGLFHMLAHAFFKALLFLSSGAVILAYHHEQ NIFKMGGLFYKNKFLFACFAIGGGALAAIPFLTIGFFSKDAILGEVWVQGQSIALYNSLY WAGVAGAFLTSIYTFRLIWVVFFGKENTHYHEIKGATYWAPLGILAVLSTFVGAALKAPV ANILNTAKIPEFHVAEQFVEGMHGAEHLAVGIALVGLAVGIGLFAFAYGAVKSFAKTSLG AGLAHICRTAFGFDALYDIVFVKPYLFFAKLFGRDPIDSLWLVLPALVKGGNSFTSSRQT GSLREYASSMSLGVVVLLMILIVIQVVGK >gi|333032605|gb|GL891821.1| GENE 29 33408 - 35006 1498 532 aa, chain + ## HITS:1 COG:STM2317 KEGG:ns NR:ns ## COG: STM2317 COG1008 # Protein_GI_number: 16765644 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 4 (chain M) # Organism: Salmonella typhimurium LT2 # 5 508 1 503 509 555 61.0 1e-158 MENNLILPALILVPFIAGFTCWLVDKLDKTLPRWIALIGMLITLGLGLALWQSGTYSYEL GSKVPTWTAEFYLPWIQSLGIGIHLAVDGLSLLMVLLTALLGVLAVGCSWGEIQKNVGFF HLNLLWSLGGVIGVFLAIDLFLFFFFWEMMLVPIYFLIALWGHKGSNGRSRVYAATKFFL YTQIAGLVMLIGILGLVVYGYMMTGMIGFDYNYLLAVANRLPAGFAYGFMICFFIGFAVK LPVFPLHGWLPDAHAQAPTAGSVDLAGILIKTAAYGLLRFVIPFFPAASAQFADIAIIFG LIGIFYGAWCAYQQTDMKRLLAYTSISHMGFVLLAIYAGNILTFQGLMIMMLAHGLSSAA LFIMSGQIYERLHTRDLRLMGGLRGQLQYLPFFLMFFVAALVGVPGLGNFIGEFLILMGS FNKYPVFTIIASISLVFAGLYGLILIHRALFGEPNSEQKQHYTSPLKDLSAREVSILMIC AIGLVWLGIYPQTFLDVSHSSMQWLVNSYVPVQEVVETVQQTATQLDHVEIQ >gi|333032605|gb|GL891821.1| GENE 30 35009 - 36505 1698 498 aa, chain + ## HITS:1 COG:YPO2543 KEGG:ns NR:ns ## COG: YPO2543 COG1007 # Protein_GI_number: 16122761 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase subunit 2 (chain N) # Organism: Yersinia pestis # 4 487 2 486 487 376 48.0 1e-104 MNFTVSFSTLMPLAPVMIVALTAVVVMLLISIKRNHNLIATTSVVGLNLAALYILLELFG GKFVPANVMGMFMVDPFTMFYQFMILVASLACCTLSHAYIETYKDNREELYLLLLASVAG AMLMVASSHYASFFISLELMSIPVYGLLAYTYQRSQSLEAGIKYLVLSATASAMLLMGMA YIYAYTGSLSFYDSVQALFGAIKQPMVLLGLALIIFAVAFKLSLAPFHKWTPDVYAGAPA PMATFLATAAKVATIGLFVRYLLASGAIMVNSLVTVLTIIAVLSILVGNLLAVRQVNLKR ILGYSSIAHFGYLLIALISMTYASLGSVTVYVVTYVLTTIGAFGAVALMSSPYNNVDEAQ SLADYRGLFWRRPVLTATLTVMMLSLAGIPLTAGFIGKFLVVMAAVTTQHWFLAAMIIVG SGIGLYYYLRVMVVMYMTPPETPRIDADAHWGQKVGGLMVLAAAALVIILGVYPDPMINL ALKAEILSPLHFMLSQQQ >gi|333032605|gb|GL891821.1| GENE 31 36606 - 37241 995 211 aa, chain + ## HITS:1 COG:PA4646 KEGG:ns NR:ns ## COG: PA4646 COG0035 # Protein_GI_number: 15599841 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Pseudomonas aeruginosa # 1 211 1 211 212 298 72.0 4e-81 MAIQEIRHPLIRHKLGLLRRADISTKNFRELAQEVTMLLTYEATKDLPVVDCEIEGWAGN VTTQRIAGKKITIVPILRAGIGMLDGVLNLIPSAKVSVLGLERDEATLEVRTYYKKLVPD VANRIAMIIDPMLATGNSLVAAIDVLKASGCKDIRVMVLVAAPEGIAKVEAAHPDIQLYT ASIDNGLNEHGYIVPGLGDAGDKIFGSVQKD >gi|333032605|gb|GL891821.1| GENE 32 37358 - 37651 354 97 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00723 NR:ns ## KEGG: ACICU_00723 # Name: not_defined # Def: putative cold shock protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 97 1 97 97 169 100.0 3e-41 MKQEFYTGRVKQYNADKGFGFISTTEGDIFFHISDFPASEGEPKRNEKVRFLAADNRGKF KAVKIERIDPNPAKTKKTKIADHNKAITSELLSNFRR >gi|333032605|gb|GL891821.1| GENE 33 37671 - 38558 193 295 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 3 256 1 254 305 79 25 9e-14 MRMTLRQLAVFVAVAQEGTVTKASDAVRLTQSAASMALADLEDGLGAPLFDRLGKRLQLN DLGRFLLPQALEILGRCEAFEQAAKGELQSIDLRIGATLTISDYLMPDLMANFLQRHPQA HLQLQVGNTRQMIEAVNQFQLDLALIEGSCHLPQLQCIHWRDDELAVCCSPDHPLTRLNR PLTPQDFHDVEWILREEGSGTREVFDNAILQDLPDANIRLTLGHNEAILKIVAGGLGMSC ISKLAIEPLSEKGQLVILDTPFWQLTRPLYMLVHRQKYQGPGLKAFLKFCDEDQA >gi|333032605|gb|GL891821.1| GENE 34 38645 - 39406 764 253 aa, chain + ## HITS:1 COG:PA4615 KEGG:ns NR:ns ## COG: PA4615 COG1018 # Protein_GI_number: 15599811 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 2 253 4 258 258 249 51.0 3e-66 MSIEKFSVEKVLSVHRWTPTLFSFTMTRPSHFKFTAGQFARIGLKVGDELVVRAYSVVSS PFDETLEFFSIVVPDGAFTSNLQHLKVGDELYLEKIPYGYLTLARYQQPLPHDLWLLATG TGLAPFLSMLQDFETWSNYQKINLVYSVRTAAELAYVDRIQEIAETFGEGHLGFKFIPII TRDPSAPLHERLPVLIENGELEKVAGLELSPASSHVMLCGNPQMVDDTKEALKRRGLTMN RRGEGNIAVENYW >gi|333032605|gb|GL891821.1| GENE 35 39454 - 39876 476 140 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3042 NR:ns ## KEGG: ABAYE3042 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 140 1 140 140 279 100.0 2e-74 MMYRQQSVTLDLDTDVTHQCYLHQTRDDHLIGIIEFNKPSYELKWGDLEYFRRRTEEFSV MPFPECINAMIVDIRNINVFLDNEVPILPWRLLEEDCPVRLVVPQDRLEHYAGLFEPTWL STDVDSAIAEIREFMDMFVH >gi|333032605|gb|GL891821.1| GENE 36 40166 - 40393 276 75 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002843 NR:ns ## KEGG: ABBFA_002843 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 75 1 75 75 136 100.0 3e-31 MHDFSKPPHVTSPEETAKKRRLPVYILIIVGLFLLALVVYMVADHSKTPKEEAAFQHETI PQVISGTSDLKTYEG >gi|333032605|gb|GL891821.1| GENE 37 40621 - 42297 1917 558 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00728 NR:ns ## KEGG: ACICU_00728 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 558 1 558 558 887 100.0 0 MNEFFNGPRGAQFDAMYYWDQFHPILAAIVILLVGWIIALLVAAGVKKLLQKVNTNAKLS SATGRTPNIEGLISKVVFWFILILAVVAALNVLNISGVSGPFSNMVNQVLVYIPNIIAAV VVGFIGWIVARLVRAGVTNVLSRTQLDDKLSSEVGVGGISQNIGEILYWLVLLLFLPIVL SILGLTGLLIPVQNMVNDAVAFLPNIFIAGVIVFVGYILAKIVRGIVEGLINSLGVQSQA EKIGLFKNSNVGKFLGSFVFAIIIITTLIVAFEALGIETISQPATAMLNEILQAIPNIIA AGLILLVAYIVSRFVGRLVAELIAGTGVDEIPAKLDVQRFLGQTKVSNAVGWLIVFFTML FAVSEAADRLGFDQISGLIAMFIHFGANILLGAVILVIGFWLANVVANVVQRGEYNSSRW LGSLVRVLIIGLVLALGLRAMGIADSIVNLAFGLTLGAVAVAFALAFGLGGRQPAERLLS DLLDKAKKEASQPNPLYQPPTNNKTTGSSTTVSTPSTTTTAPSTTVSSDAKPADSAQVNP SQPPVNKPFGSTGENDEI >gi|333032605|gb|GL891821.1| GENE 38 42426 - 42596 229 56 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002841 NR:ns ## KEGG: ABBFA_002841 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 56 1 56 56 78 100.0 1e-13 MKKPGRFLAPVVIAGITVGFLASAYKFVFSKSESSKQTTSHKHDSEKSSNDSKASN >gi|333032605|gb|GL891821.1| GENE 39 42609 - 43808 1186 399 aa, chain - ## HITS:1 COG:PA0559 KEGG:ns NR:ns ## COG: PA0559 COG2081 # Protein_GI_number: 15595756 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Pseudomonas aeruginosa # 4 398 2 391 392 431 52.0 1e-120 MSNSHVDVIVLGAGASGLMLAAHAAKRGRSVLILEKANKIGKKILMSGGGKCNFTNLYVE PENYISHNPHFVISALSRYSNWDFIGLVCDYGIAYEERKHGQLFTLNGAKEILEMLVSEC NKTNNVEIQTHCEVGQVDPLEQGGFSVHTNQGRFSCESLVVATGGLSIPTLGGSGFGYEL AQKFGHTVFPTRAGLVPFTFSDHIKEVTTRLSGNALDVTLTNSKNSFTEALLFTHRGLSG PSSLQLSNYWNTGESFKIDFFPSQDLATYLKDKKKAQPKVLLRTLLNEFTAKSIVQELQQ LIWPEQSETAIGNISDAQLDHIAEQLHGFIVKPSGTEGYRTAEVTLGGIDTTEVSSKTLE SKKQKGLYFIGEVLDVTGHLGGYNFQWAWSSAYAAAQYV >gi|333032605|gb|GL891821.1| GENE 40 43926 - 44807 818 293 aa, chain - ## HITS:1 COG:alr4447 KEGG:ns NR:ns ## COG: alr4447 COG2515 # Protein_GI_number: 17231939 # Func_class: E Amino acid transport and metabolism # Function: 1-aminocyclopropane-1-carboxylate deaminase # Organism: Nostoc sp. PCC 7120 # 20 287 23 309 315 238 45.0 1e-62 MFDHIAQPISYQHVELSFPVHLDIKRLDLVHPQISGNKFFKLKYNLLAAKEQGLSSILTF GGAYSNHIAATAYAAHLFGLKSIGIIRGEELAGKSLNPTLAKAQSLGMQLHFVSRHEYRL RDEANYLKQLQQQFPQTYIIPEGGSNELAVQGCQEILSQYDLEQYDVICCAVGTGGTISG LIERSAAHQKVLGFSALKGNFLQQEIRQWTKKQNWSLTDVYCWGGYAKTSPELFAFIENF EEQYTVPLEPIYTGKMMFGLFDLIKNNYFPANTRILAIHSGGLQADIRNRPHA >gi|333032605|gb|GL891821.1| GENE 41 44874 - 46007 1413 377 aa, chain - ## HITS:1 COG:SMc00564 KEGG:ns NR:ns ## COG: SMc00564 COG1566 # Protein_GI_number: 15964887 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Sinorhizobium meliloti # 56 376 31 351 362 268 45.0 1e-71 MSDDQNKPEQTPAQTSNNEPTPAPAPAPAPASKLIPTKRSTLLWMLGVLIIGILVILWAW RIGPFATSVQQTDNSYVKGKTTILSSQINGYVKDVLVKDFDHVKKGQVLMHIDATTYDQK VAQAASGVEQAKNTLANQTQSIAQKQADIVAAQAKVEQVRAQYELSLAQLRRYQQLGNSG AASKSEQDKAAADAENNLAALKQAEANVLVAKEALKTAQVAEAGLEAQVSSAKAQLDQAQ TTKDYSVIVAPMDGQLGEVNPRVGQYVAAGSQLLYLIPQQTWVIANFKETQIANMRIGQK AWFTVDAMKHKKFTGHVEQISPAAGSEFSVLKPDNATGNFTKVVQRIAVRITIDPNQEGM EHLRPGMSVITSVDTSS >gi|333032605|gb|GL891821.1| GENE 42 46048 - 47691 1515 547 aa, chain - ## HITS:1 COG:AGc2011 KEGG:ns NR:ns ## COG: AGc2011 COG0477 # Protein_GI_number: 15888429 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 527 46 558 583 278 34.0 2e-74 MSKTPRYLETPPDWTPEEQPTLPGSPAAIAHSVPKRFLYFFIGLFVAISASLSNGFITAN LPLIQGEYGLTPSEAAWLPAAYVMANVSSNLILFKARQQYGLRVFSEIGLVIFIAVLVLH IFVHTYEMALFARVVAGLAGAPLSSLGMYYTMQAFKKADMAKGIYIAFGFQQLGVPLAWI ISPFLVSTDSWSVLYTFELGLALCCLAMVVSLKLPRSLRIYVFEKQDFFTFALLAPGFAC LCIVLTQGPILWWFNSEWLAYVLIAGFSLVVLGLIYEHYRANPLIMTRWLGASSTLRFIF GAFAIRLLMSEQSYAAVNFLKTMGMGPDQFVPLYVVILVGILSGTLFSALTFSRERIIFH LLFAEFLILIACGLDYHLTSDVRPSNFFASQFLVGFAGGLFIGPLLLIGFAQTLAKGPSY VVTFIVLFSATQTFGGLVGSSFFSTYQQHRTQNYQVEIIKDLEQADPLVAQRLSTYQRSA AITTNDPALQTAQSMRSLNQVVTREAQVRAYNDVIALNGIFAVALLLWGGFNIARSKYLQ RRGISRP >gi|333032605|gb|GL891821.1| GENE 43 47688 - 48257 614 189 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00734 NR:ns ## KEGG: ACICU_00734 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 189 1 189 189 361 100.0 8e-99 MSKRQKIAAHNRDELLNAAEECFRIHGINVPLQVVIDHAGVGRATFYRNFCDRKALISAL LERAITQLEQKAAHFQQFEDGLFRLIEGHIAQLPKLAILQDFWRVIDRQDPIMLKIYERR NNALKPLIENAIEQKLCRADLTADDYAMVTAMLGSSFQGHEPEEQTRLAKRAIELLFHGI QVQKIRGIE >gi|333032605|gb|GL891821.1| GENE 44 48436 - 49059 441 207 aa, chain + ## HITS:1 COG:STM3959 KEGG:ns NR:ns ## COG: STM3959 COG1280 # Protein_GI_number: 16767229 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Salmonella typhimurium LT2 # 5 204 2 203 206 94 27.0 1e-19 MFESLIPLFSIAMALMLGAISPGPSFIYVAQNSISKSRKHGLFTALGTGTGAALFGFLAV MGLQAVLLAVPSAYLILKIGGGLYLLWLAFKIIKHAKEPIAMENDAKSKMTYKQAYRYGL ITQLSNPKIAVVLASVFTALLPKEIPNYYYVALPLICFMIDAGWYSCVAMLLSSEKPRKM YLKAKTGVDRVAGSIVSVLGLKLIFFK >gi|333032605|gb|GL891821.1| GENE 45 49222 - 49410 256 62 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3032 NR:ns ## KEGG: ABAYE3032 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 62 1 62 62 115 100.0 8e-25 MKKLMVSISVVFFILTTGCEMRTTSKQQPSNERAMSIAGSPVYEKDYKIPDLQANNHEQS NY >gi|333032605|gb|GL891821.1| GENE 46 49540 - 51612 2518 690 aa, chain - ## HITS:1 COG:PA3482_1 KEGG:ns NR:ns ## COG: PA3482_1 COG0143 # Protein_GI_number: 15598678 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 1 559 1 557 578 736 63.0 0 MRSVRKILVTNALPYANGPIHMGHLLGYIQADIWVRAMRAMGHDVTYVCADDAHGTAIML RAEANGISPEEQIANVQKEHIRDFDGFGVHFDHYDSTHSDANKARSTDIYIKNREAGNIA VRPVTQLFDPEKGMFLSDRFIKGTCPKCKSEDQYGDSCEVCGTTYNATELLNPRSTLSGA TPVEKSSDHYFFKLPNFAEYLQKWTRDEGRLPLSIANKLDEWFEAGLADWDISRDAPYFG FEIPDAPNKYFYVWVDAPIGYMSSFENYIKTKRPDLNFDDFWKKDSQNEVYHFIGKDIVY FHALFWPAMLEGANYRTPTGLFVNGFLTVNGQKMSKSRGTFIKAETYLQHLNPEYLRYYF ASKLSDKVEDSDLNLDDFVQKVNSDLVGKVVNIASRCAKFINSSFNNTLSSTCAESDLVQ SFIDAGDSIAAAYEAREFSTAIREIMALADRANQYIDEKKPWALAKQEGQEQQVLDVCSV GINLFRQLAVYLAPVLPTLAQQVQDFLKLESFDFESRKQILVSHEIAQFQPLMQRVDPKA VAAMVDASKESLGAPAPQATKSAKKEKSAEKKAAPTPAVGEAEIIGIEDFLKVDLRVAQV VEAGTVEGSDKLLQLTLDVGEAEPRNVFSGIRSQYAPEDLKGKLVVMVANLAPRKMRFGI SNGMVLAAGNGEGIFIISPDSGAKPGDKVS >gi|333032605|gb|GL891821.1| GENE 47 51890 - 52390 732 166 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00738 NR:ns ## KEGG: ACICU_00738 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 166 1 166 166 169 100.0 5e-41 MTTENKLDELKAKAADAKVQGEKALDDLKENVKEKQTAGKEAVADKVDELKTKAADAKVQ GEKALEDLKENVKEKQAAAKEAVEDKANDLKGKLDDAQHSLQDKFDHLRTEAAHKLDDAK AKAAELKEEAATKFDELKTQATAKFDELKKTATEKLNKLKNHDSAE >gi|333032605|gb|GL891821.1| GENE 48 52536 - 53765 1366 409 aa, chain + ## HITS:1 COG:YPO1523 KEGG:ns NR:ns ## COG: YPO1523 COG0489 # Protein_GI_number: 16121796 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Yersinia pestis # 143 399 100 362 370 292 56.0 8e-79 MSWLSSLKSVFSPAQEVKEEEIQTVLQNYLLPDSKDALKERISQLQVQGRVLQLTINTFP DEKEYLQQIHDDLAGALQKCGIEELNLHVVQQKRPTQESSGQSCSSKAPKENSNLPPVLD ASPKSEPDPNNPPIQKAAPQQRDVPLHPRIKNVILVSSGKGGVGKSTTTVNLALALQKMG LKVGVLDADIYGPSIPTMLGNAGKTPLIESENFVPLDAYGMAVLSIGHLTGDNNTPVAWR GPKATGALMQLFNQTLWPDLDVLMIDMPPGTGDIQLTLAQRIPVTGSIIVTTPQNVALLD ATKGIELFNKVGIPVLGVVENMSTHICSNCGHEEQIFGIGGGDKLSEQYHIPLLGRLPLN AQIREHADQGKPSVVAMDDAADSYIDIAKAVWQQIKKIPQRARDDKRIF >gi|333032605|gb|GL891821.1| GENE 49 53911 - 54783 943 290 aa, chain + ## HITS:1 COG:VC2379 KEGG:ns NR:ns ## COG: VC2379 COG0775 # Protein_GI_number: 15642376 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Vibrio cholerae # 44 256 3 198 231 78 27.0 1e-14 MQFKYSLGVISLCSALFLVGCNDDNSSVSQTPTVQEQKQKLQPIIIQGALPVESERMASK LENKTVEKIGGWTFWKGTYNGYPMIISKTRMGMSNSAAATALAIERYKPIAIINQGTAGG HDPDLHVYDIVLGKYATNIGAFRTPKQPLGGGSNSLTWVEAFDVLPTDESDPEPIAIRKF EGDQELLMAAHKVRYDKGEVVEGTIGSADVWNNELDRIQFFHERYGTSVEEMEAASVAQI ASQFNVPFLGIRILSNNITNNGAYDPGTGEACQDYVLNVAEEYMKSKLPK >gi|333032605|gb|GL891821.1| GENE 50 54814 - 55380 452 188 aa, chain - ## HITS:1 COG:PA2985 KEGG:ns NR:ns ## COG: PA2985 COG3216 # Protein_GI_number: 15598181 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 3 175 1 163 177 90 31.0 1e-18 MIMAKQFFQSWLPSPEKVTNMKFLRIFGQKTLNPVLWYVNRKSITRAIFVGTFFGLLPIP FHSVFIVMAVLLFEVNLPISLMLAWLSNPLTLAPILYIGFWFGAHIYHVHMINKKMLLGV LHQISRWITHFGHGHIDLSLAKILISGLIVEAFVFATILYIVTEIFWRWMVIRNWKNRTG HKKQEDAL >gi|333032605|gb|GL891821.1| GENE 51 55737 - 56330 605 197 aa, chain + ## HITS:1 COG:RSc2088 KEGG:ns NR:ns ## COG: RSc2088 COG1280 # Protein_GI_number: 17546807 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Ralstonia solanacearum # 10 194 14 198 200 121 40.0 6e-28 MISWLFIGLVATILLTPGPTNTLLASSGVQVGLKKSAKLIPAEVLGYVISISAWGMLIGK VSATLPLLPPLLKLLSACYIIFLAIKLWHTANQQLELDQPTIRPRELFCATLLNPKALLF ASAIFPVAAWTNFHIYLIHMLAYLALITPIALFWIFLGSVLAANKVRWLNQSNLQRTASL VLVSFSIPISYSALLNL >gi|333032605|gb|GL891821.1| GENE 52 56445 - 57014 689 189 aa, chain + ## HITS:1 COG:PA3480 KEGG:ns NR:ns ## COG: PA3480 COG0717 # Protein_GI_number: 15598676 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Pseudomonas aeruginosa # 1 188 1 187 188 341 82.0 5e-94 MAIKSDRWIREMSEKHGMIEPYAENQVRFDKNGEKLISYGVSSYGYDVRCAREFKVFTNV HSAIVDPKNFDEKSFIDIESDVCIIPPNSFALARTIEYFRIPRNVLTVCLGKSTYARCGI IVNVTPLEPEWEGHVTLEFSNTTNLPARIYAGEGVAQMLFFESDEVCETSYKDRGGKYQG QTGVTLPKT >gi|333032605|gb|GL891821.1| GENE 53 57311 - 58789 1750 492 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00744 NR:ns ## KEGG: ACICU_00744 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 492 10 501 501 867 100.0 0 MRQFTSLQVAILALGSLCFSSAYAGSTLVPMSDAELSATRGQALMSMSYIAPTDSANLEK LRDNSSNIGFYKLGMEAELEINTNIRKLQLGCGGVNGAGGCDIDIDNLSLSGQNFDANGN PLPMSNEDRASSSAVLTNPFIEFAVKNPNSASTREVVGLRLSAEKFIGLLTAGTENTTTP NGINSISGYMKVQSDSSGLIKGYATTSATRDNLYGANAVTGRLQALGLGGFAEVSFITSN GGFNIPGIQNNYFEIAPIQVNGNRVSSKVLSAPVKVPNIYVGHSSSYPVDGTVQYNAAGP HDPAYPEPTGIYTQGGKVEATVTDCSVLACAVAGKGSKFSNVYMNGTISNITANLNLTQS LGLIHNLPINSPMYLALQNQMLQWPGAKADDVAQKGWWMSFADPVNIGNIIPQDAIDISP LFPQISAAVSAYLQANPAQTSDLGGLLKLGDLDVNISTVDLKNSPLTLNLSNLQLTNQNF KPNCHGSGLTFC >gi|333032605|gb|GL891821.1| GENE 54 59022 - 61055 1838 677 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00745 NR:ns ## KEGG: ACICU_00745 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 677 1 677 677 1151 100.0 0 MTTLNYTVRFQKTVLATLIGLCISQSSFALEELSDAGLSETTGEGIAILPQNTYMVLRGA GANETTNQILTDRTKDTGYINYVPVGPLSMTAADTNKNGTIDSGDRAVGKADIFLYGLAL SKSDNDTNTRLASTDTAAAISSWGTAINPWIFKVATENSVPNFSATNCSGAADPTCQVTY LALEAPLYEVGTRDTAGLDAYKLKLGLWSDIFVRNPNKINGATDQFNYGDSNGLIGTSTD ASRANRLRLQGIWNNFSLNGSRLQLFQTLGGATSANGLSPFYNNTLGFAGVVRLNSGDAT NLRATITANTPTSTVGPWVNRYSTQYTGAPSNNSPSSDWLYRIRSQTTTITSTGSWTAPT DSAMNNVLRLSTRESGTGQGNLITPAINGGLAPTFDANEGLYLYNPNINLVLGSLYQPLV LSSDGKNFSLELARIPNKPEIYKKIYTDYTGTDSSYLGSTCNVYQCGANVTLGGKTYQGS NATHSSISIGSTVYNATTNTLEAFKGNNAQDAVGISFGKLPTGTVTATTQTRNFYQLQNQ ERRVNSYTCSLIFTCYDWQYRTATGWTGNAGSGLRFDSQGANWANIDSTAYYNPTTNTTG YTTTDAGNGAQFVVPNGTPLPDALYNNGRWYTTTPNADINTYKLSGAQISSSISNNMGSA VIDGVLIQHLKLTTKGL >gi|333032605|gb|GL891821.1| GENE 55 61069 - 61794 659 241 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00746 NR:ns ## KEGG: ACICU_00746 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 241 1 241 241 450 100.0 1e-125 MKKITALLFALCATVTHAELQTLDNDALQAINGQAGADLSLMLNLNQTSNGIFDNGSGGV CENVEFCHIGLAINKRFVQTDATKPSGWTENSDSGNKLWLVFKGVQGTLNIQKMGLDGAD LKYLDKSNTEIIKPAIQLSFSAAQPILIRNFGFNALSIEQDNFTSSTTTQGSSANMYDYA YFKKPTYAATANSANQQVATATPSAYDYGRETGFMGLMMNGNLAIQGKVMVFSCDGSHPR C >gi|333032605|gb|GL891821.1| GENE 56 61827 - 64238 2363 803 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00747 NR:ns ## KEGG: ACICU_00747 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 803 1 803 803 1351 100.0 0 MNKNKESHGSKFILNTLTASMLLVSGQVFALEALTDADLSAVNGQDGISIQTTFNEINID NAYWDDHAGTPTSADQILRAQASGVKIQKSNASTQALGTNYRLDVGSNATTGKAGVDFSI QSSPSLITVNSVKVCNSSAACSPTLGQLAIQTTSPLNLALTTQDGLFSPNSQSSMTLGLN NANIYLGQLDARSQLNQLILKNFNFNFVGKGVMFIDPTRGIVLQTNTGNNTAAVGQTPNS TYGYVDFNRVADSASGLTAGTYVDSSGKVTNSGLNIEVMLSSNVDKSNPYALDTTNSPQN SKGLIRLGASGRMVNSYLQVRGMDGSSDKTTLGTANTASGTGSSNSILGNSGIAFRMKGE FTKDNDSMLGSDGKATTLEIGGAGLNAYGFEFGNLTGLNSATRGYFDSGNIYLNLADTKT LLMPNNATLNAIRLGSGTLTTAADYQHNIHRDTVTNPFSLILAMRGAEFQAFSRRGRFTT SANVAAANQFADNGLNNQWGLALPFYNLNANAAVYGVDAPANGAYYYTKDANGKPIQNLV ATSGTTSRLGFGIAVGTTGRDAGGTKTTSILLIDGSPNANNAGNPTDYYMGLRNIDMFLK GNGTIGLENGSLNIGLKDMLLALSTEIAAGYLPGAKYKTCPATGSCTSPIDNFAKNNDVL FGLKLRLGGDLNLSIVPNSSIADGSALTVLGDFTMPATATGNTVQISDPIDGSAIGFDNI TGKLAFNTALVVGKDTASGLGKVGVNTAVYFNPDKSIDGALRVKDINFYPPSTGAGARLG ELAITGGRLNSSFSIVPRNGAFN >gi|333032605|gb|GL891821.1| GENE 57 64400 - 65353 716 317 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00748 NR:ns ## KEGG: ACICU_00748 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 317 1 317 317 523 100.0 1e-147 MKNKNIVCWLLFASSSSVFAMQPLDDQSLAAATGQNGLTLGIQADQVKFNQVALIDTNGI ASTSYNSKAGLVIAGNSTNPVPGIEFIKAAVSTNPSFNIAIDTDAGGGNPFLNLAVTMGS DVNGIRLLPFSVYLAPSTSLSSPSDYALTSYAPKSIFSSGTTVNTGVKELIRSTGNLDIN FVQTNKPRLNIQLGHAAQSVMVKFGGAIQSICSAASGCPITLVSDNTGATFGFKFAGTNA STGFVLDGFYAGVDPTGLTFGNIGVSSKFDASLNNVTLGNLGTQSTTTFNNLPNGSMGSF GVTGASVTDFKMKVSGF >gi|333032605|gb|GL891821.1| GENE 58 65433 - 66356 978 307 aa, chain - ## HITS:1 COG:PA3129 KEGG:ns NR:ns ## COG: PA3129 COG0042 # Protein_GI_number: 15598325 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Pseudomonas aeruginosa # 1 306 8 317 319 300 49.0 2e-81 MEGLTDPIMRDTLTSVGHFDWCVTEFIRVTDSILPDHIYYSFCPELKNDGKTAAGTPVHV QFLGNNPEMLAANAAKVVELGAPAIDLNFGCPAKTVNRHRGGSVLLDEPDVVHMLIKAVR DAVPAHIPVSAKMRLGYLDENHTMENAHAVEDAGASWLTVHARTKADGYTPPAYWEKILP IKEALKINVIANGEIWTNADARACQQQSGCEDLMIGRGAVTTPDLTQCIRQNMDEALFTW EQLVDLQIRFLNGQAKTEIGMVGRYKQWLGMMTKAYPQAKELWDQVKRIKALDEIVQQLE QTSSSRI >gi|333032605|gb|GL891821.1| GENE 59 66462 - 67271 785 269 aa, chain - ## HITS:1 COG:XF0072 KEGG:ns NR:ns ## COG: XF0072 COG4137 # Protein_GI_number: 15836677 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Xylella fastidiosa 9a5c # 6 267 2 261 282 116 32.0 4e-26 MISLPLVYTILALIAYTTSFWYLFIRLMSKREPNPWLFAFVTTLALLLHGTVLCHAMLTP SGINYDVFNLVSFTSGLMLLLSLVFSTFRPIVPLNLLGIPVAAIGLILGFAFSRPDQFIE QHSLGLDTHIILSLSAYAVLLMATIHAILIWFQNRELKKKQKKRIWVNLLPSIQAMESLL FDLIITGFILLTIALAFGFLTVDSFFAQHLAHKTVFSIISWFIYGSLLIGHYKLGWRGQK AIRFTLIGFALLAIGFIGSKFVLEMILGR >gi|333032605|gb|GL891821.1| GENE 60 67412 - 68821 1887 469 aa, chain + ## HITS:1 COG:ECs3473 KEGG:ns NR:ns ## COG: ECs3473 COG0541 # Protein_GI_number: 15832727 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Escherichia coli O157:H7 # 1 427 1 425 453 534 66.0 1e-151 MFDTLTERLTQSLRNVTGSGQLTEDNIKDTLREVRMALLEADVALPVTREFIAKVKEEAL GQEVMTQLSPGQAFVKIVYDELTKMMGEANETLDLSAKPPVVVLLAGLQGAGKTTTAAKL ARFLKERQKKKVMTVSADVYRPAAIKQLETVSAEVGAGFIPSDPSEKPIDIVNRAIEQAK IQFADVLIVDTAGRLHVDEDMMDEIKELHAAVKPTETLFVVDAMTGQDAANTAKAFNDAL ALTGVILTKTDGDARGGAALSVRAITGKPIKFLGMGEKLDALEPFHPDRVAQRILGMGDV LSLVEEVERKIDKEKAEKMAKKLQKGGSFNFEDMLMQFEQMKKMGGMMGFLDKLPGMSSA GIQQAIEQANPEKQVKKMEAIIQSMTIKERRNPDLMNPSRKKRIAAGCGMDVAEVNKLIK QQAQMAKMMKKFANPSGMSKMMRSLGNMQKQFGGGGGMGPLFGNNDQKK >gi|333032605|gb|GL891821.1| GENE 61 68871 - 69605 812 244 aa, chain - ## HITS:1 COG:PA4279 KEGG:ns NR:ns ## COG: PA4279 COG1521 # Protein_GI_number: 15599475 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Pseudomonas aeruginosa # 4 213 3 222 248 84 30.0 2e-16 MKSLWLDIGNTRLKYWITENQQIIEHAAELHLQSPADLLLGLIQHFKHQGLHRIGISSVL DTENNQRIQQILKWLEIPVVFAKVHAEYAGLQCGYEVPSQLGIDRWLQVLAVAEEKENYC IIGCGTALTIDLTKGKQHLGGYILPNLYLQRDALIQNTKGIKIPDSAFDNLNPGNNTVDA VHHGILLGLISTIESIMQQSPKKLLLTGGDAKLFAKFLQKYDPVVETDLLLKGLQQYIAH YPKD >gi|333032605|gb|GL891821.1| GENE 62 69621 - 70373 730 250 aa, chain - ## HITS:1 COG:VC0319_2 KEGG:ns NR:ns ## COG: VC0319_2 COG0340 # Protein_GI_number: 15640346 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Vibrio cholerae # 43 242 17 228 237 85 31.0 8e-17 MDLETRQLQQLLSAKNQLPEVVLLKATTTSTNDDIREIAQKGITTGLVCSAQQTQGRGQH QRQWISPEGNIYLSTLVQTRTPLDGRLALEVALNILQIPQLQPLSLQVKWPNDLYSTQGK WGGILVEPLSQYQAIVGVGINLKTPPVTDSDQPITSLEDLGLEQMSRLELISELYVAIQN AARWFEHGCYNLAGRFNHHAAWLNQLVQFEHSQGLVYGRFVGISNEGAVILETPEPQQFY QGRLRPQTTQ >gi|333032605|gb|GL891821.1| GENE 63 70404 - 71207 891 267 aa, chain + ## HITS:1 COG:PA0340 KEGG:ns NR:ns ## COG: PA0340 COG0730 # Protein_GI_number: 15595537 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 1 261 1 259 267 198 49.0 8e-51 MELIIYLLIGAIAGFTAGLFGVGGGLIIVPILYVVFTQLHYDPAVIMHIAVGTSLATIIV TSFSSVSAHHKKGAVLWPVFRNLAPGLVIGSFLGAGIADLLSGQHLQLLIGVFAVVMAYR MFKGAHVVVDPTRQLPSTPMQFMAGGGIGIASAIFGIGGGSLTVPYLNRHGVVMQKAVAT SAACGLPIAIAGAIGFMWFGAKEHISVPNTIGYIHIYAFIGISVMSFVTAKLGAKVAHAL SPQMLKKCFACLLVVVGSYFIYKGFMN >gi|333032605|gb|GL891821.1| GENE 64 71456 - 72151 757 231 aa, chain + ## HITS:1 COG:PA1526 KEGG:ns NR:ns ## COG: PA1526 COG1802 # Protein_GI_number: 15596723 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 215 1 216 219 127 37.0 2e-29 MNLEETESLSEQIVKYISEQIISGELVEGERIQELRIAKELDVSRGSVREALLLLERTHL IEIFPRRGAIVSEMSAQQVKALFDTNMMLLGHIVQRISETWRAHEADQLQLLLEQLLEHV KAGDIEKFYDAIFQYLAEQQDMVGNPYLMKFYKELLPSLRRSYFLTLNTSKRELQEAFAL FKLVTDAILIRKSQQAALFMEDFCRHLRNLVLESLTRMKQIELAWARRSRR >gi|333032605|gb|GL891821.1| GENE 65 72162 - 75611 3402 1149 aa, chain + ## HITS:1 COG:PA1527 KEGG:ns NR:ns ## COG: PA1527 COG1196 # Protein_GI_number: 15596724 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Pseudomonas aeruginosa # 1 1140 1 1156 1162 513 35.0 1e-144 MRLSSLKLSGFKSFADSTTLNFKANRTAVVGPNGCGKSNVIDAIRWVMGESNARQLRGGS MQDVIFTGTSKRKPVGVASVELRFDNTYGKLGGAYNAYNELAVRRQVTREGKSEYFLNGT RCRRRDITDIFLGTGLGPRSYAVIEQGMINRLVDAKPEEMRIFIEEAAGVSRYQARRRET LQHLEHTEQNLSRLEDIALELKSQLKTLKRQSEAAVQYKTLESQIRTLKIEILSFQAEKS VRLQEEYTVQMNELGETFKLVRSELSTIEHDLESTSALFQRLIQQSSPLQQEWQQAEKKL SELKMTLEQKQSLFQQNSTTLVQLEQQKAQTKERLQLSELQLETLNSQLEEQTEALTAIE HTAAEAEQSFAGLQSQQRQAQQQFEQVKAQVEKQQQQKMQMSAQIEQLGKNVQRIEQQKE TLQHQANQIQSQVHEDEQGELEQLQQQLCREISTLEAEIEQYVQRIEQAQQAHQVNKNQQ QTLKTEIQVLLSEQKNLSQLVAKQSPKQNQDTLRLMQALELTEQGKPHAQIIEKFLAKWL QAHIVETEQAFQEGVARQLKPSEQSSKFKGNLICLNDWIASPQLSIFSNVAIAQDLSHAL NEQKQLQYGQSILTLDGYHVGQDWVIALMYDDESQSAQGMLSHRIRLDEIEQVLQKQQPE LQALDQIIVQQKDELGQLQVDLQQKQQVIKQKQKDLQQLDVQIAKQQTAAQAFLLQKQQL KDQLAQLDTQLEEDAMQKDDLEIDLHALAMKLETILPDYKTLQFQVEELTEQLEEQQQVL QQQQQEREILRRNSTQTTQQIELLEKDISFLQSQYQQITAQMEQAKKFVDPIQLELPNLE SEFQQQFAQTEKLQKTWNEWQIELNSVQEKQQTLTDQRHQYQQQDEKLREQLEAKRLAWQ AAKSDREHYQEQLKELNAELQTGLKIDLTEHQQKLEKVQKQFEKIGAVNLAASQEFEEVS QRFDELSHQIQDLENTVTQLKDAMKSIDQETRKLFMSTFDQINQELQNLFPKVFNGGEAS LSLEDDWQSGVKLMARPPGKKNSSLALLSGGEKALTALALVFAIFRLNPAPFCVLDEVDA PLDDANVQRYCNLVKELSEHVQFIYITHNKLAMTMATDLLGVTMPEPGTSKLVTVNLEQA KEYGLVSES >gi|333032605|gb|GL891821.1| GENE 66 75613 - 76650 1342 345 aa, chain + ## HITS:1 COG:PA1528 KEGG:ns NR:ns ## COG: PA1528 COG3115 # Protein_GI_number: 15596725 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Pseudomonas aeruginosa # 205 338 148 280 289 77 30.0 5e-14 MEINTIIGIVVAIIIMLIGLRMILKKPNHAEPSLDSDLHINPESNQPVIPRHVRDQLEQP EVTVASAAVAERVEPTLSEPAQSEEKGTKELEQASQAQTVQTQVPVENTPVEVEEVKAEE NTVSPTVSENSSVELVDTVSAEPEVVSSSEPKVAEGQPKTEPELSLNPNIETAEIAEFEG ESNILDVHLHEQQRFDDESALAMAEQIIALNVYPNPRRALSGDKALKVLLKYGLRYGEMS CFHRYENTDEPSALMFSVLRMTDNGPAGFDLETLSTEQVQGLAFFLALPNSKAVTGFDMM TSIAGLIAREIDGKVYDENNLEFTPQLKEHWRHHVIDYRPAQATA >gi|333032605|gb|GL891821.1| GENE 67 76760 - 78781 2119 673 aa, chain + ## HITS:1 COG:ECs3283 KEGG:ns NR:ns ## COG: ECs3283 COG0272 # Protein_GI_number: 15832537 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Escherichia coli O157:H7 # 3 666 6 670 671 672 51.0 0 MIEQMRQLIQLIAKHNHAYYVMDQPTISDSEYDHLFHQLKALEEQYPELVQADSPTTKVG GQALSKFESVTHVVPMLSLGNVFNQEDLFAFARRVEERLPNQKVQYEVELKLDGLAISLW YENGVLVRGVTRGDGETGEDITQNVKTIRNLPKVLHSEKYEIPRLLEVRGEVLMPKSGFE KLNADQEAKGEKTFANPRNAAAGSLRQLDPNIAAARPLAFYAYGIAQCEPNHGLTTMHDS LQWLTELGFQIAERQYLCNSIQEVQQRYEQIQQERPNLQVEIDGMVVKVDDLKQQQQLGF LSREPRWATAYKFPAQAALTTVEQIDWQVGRTGTLTPVARLNPVFVGGVTVSNVTLHNIG EIHRLDVRIGDTVSVYRTGDVIPKVEKVWPEFRPAEAEVVHLPESCPVCASPVVMPEGEA LARCSGGLYCAAQRIEAIRHFVSRKAMDIEGLGDRWVESLLRLDLLKDVADIYHLHEHRE TLLGIEKMGEKSVQNLIDAIEASKKTTLARFIYALGIRGVGETTARMLANTFQTLEALKA ANVEALKKTPDVGDITAEWIADFFLAPHNIEVLDRLIAAGIHWDAPTAPTRQPLNGESWV LTGTLEQMTRDQATQMLQALGARVSGSVSSKTKCVVAGEKAGSKLEKAAKLGIPVMNETD FLSLMAGYGQTLS >gi|333032605|gb|GL891821.1| GENE 68 79035 - 79499 694 154 aa, chain + ## HITS:1 COG:NMA1377 KEGG:ns NR:ns ## COG: NMA1377 COG2193 # Protein_GI_number: 15794298 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Neisseria meningitidis Z2491 # 1 154 1 154 154 199 63.0 2e-51 MRGNPEVIDYLNMLIGGELAARDQYLIHSRMYEDWGLNKIYERIDHEMQEEASHADAIIR RVLFLGAKPNMHREDINVGTDVVSCLKADLALEYHVREKLATGIKLCEEKGDYISRDMLR QQLSDTEEDHTYWLEKQLRLIELIGLQNYIQSQI >gi|333032605|gb|GL891821.1| GENE 69 79740 - 80987 1276 415 aa, chain + ## HITS:1 COG:YPO1221 KEGG:ns NR:ns ## COG: YPO1221 COG0477 # Protein_GI_number: 16121510 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 35 408 15 380 384 211 40.0 2e-54 MGNRLVWIANGFMVSFAYMLFSKPAVLDTATLLSTQRLATRLSFFSLGFAISAWAPLIPY AQQRLNLNHANFGLLLLCMGIGSMIAMPATGALVKRWGCRPLIAMATILLMVLLPSLTIW HSLVSMAVALFIFGTAAGSLGVAINLQAVVVEKHSLRALMSSFHGMCSLGGLIGAMLVTA LLAIGLSPLMSTLSVVMVLLVVSFVAIPSALTTFEQDEQGAAEITDAPKKSSRPNGTILL IGMMCFIAFLSEGAAMDWGGIYLTSKYQLNPAFAGLAYTFFALSMTSGRFAGHILLKQWG EKTIVTYSAIVAALAMVTIVMAPVWQVVVLGYALLGLGCSNIVPVMFSRVGRQNDMPKAA ALSLVSTIAYTGSLSGPALIGLIGQWTSLTTVLSGVAVLLTMIAILNRFTLVKAK >gi|333032605|gb|GL891821.1| GENE 70 81055 - 82485 1423 476 aa, chain - ## HITS:1 COG:RSp1105 KEGG:ns NR:ns ## COG: RSp1105 COG0380 # Protein_GI_number: 17549326 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphate synthase # Organism: Ralstonia solanacearum # 1 455 1 462 465 378 43.0 1e-104 MSKLIVLSNRISMPSGKASAGGLAVAVQDALNDSNGIWLGWNGQQITDTEAPEFDQAYSH GIDYITCPLTHQQYAQYYCGFANKVLWPAMHDRDDLIEYNAEEYNTYQKVNRLFAEKLQQ IAQPDDLIWVHDYHFFSVARHCRELGMQNKIGFFLHIPFASLNIWRKIPVALQLVQDLCQ YDVIGLQTQTDQNTCMQTCMGLLEAQKILSDRISYKKRQILIKSYPIGVQPELIQRQAQQ AFHTPYVFNFEDIPRQKTIIGVDRIDYSKGLLERFNAFATFLETNPEYHGLVRHLQVATP SRTDIPAYQRLYQRFKAKLELINEEFAHEDWRPIDCCFDTVQHDSLMHIYRRSDICWISS LRDGMNLVAKEYIAAQDPENPGVLILSKYAGAAEQMTQALIVDPLDRAAMMDSLKTALEM SKAERINRYEQLIEGLAATDLSDWRNNFLKDLENSPTFTKSKLSLQEKYQPTYHVL >gi|333032605|gb|GL891821.1| GENE 71 82473 - 83324 545 283 aa, chain - ## HITS:1 COG:ECs2605 KEGG:ns NR:ns ## COG: ECs2605 COG1877 # Protein_GI_number: 15831859 # Func_class: G Carbohydrate transport and metabolism # Function: Trehalose-6-phosphatase # Organism: Escherichia coli O157:H7 # 33 274 15 257 266 141 32.0 1e-33 MNNQSIISDGREKYTYFVTPNDIINTLPTDKNYCLFLDIDGTLAPFQIHPEHSFIPNTTL EVIKKIIELNIPVIAVTGRDVETASKLLQSIELPIAGLHGLDIYFDSDTYIRPDLSDINF QKLKEDIINSCEKYPDLLIEDKEHSIALHYRKNPELEDNAIYIMQQIKYFYPQLKLNRGK FVVELLPKQADKGKAIQTILNHLNLPLTHPIFIGDDLTDETGFIFINQQFGTSIKVGSGK TEAQYRLKDINSVSNFLFFFLEKIKKLYVKNSQDQNGEQICLN >gi|333032605|gb|GL891821.1| GENE 72 83680 - 84414 449 244 aa, chain + ## HITS:1 COG:PA0502 KEGG:ns NR:ns ## COG: PA0502 COG0596 # Protein_GI_number: 15595699 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 3 237 1 234 240 117 33.0 3e-26 MKLQNKILLITGWGVGVEPLHSLKLGLTKAGYDTQLINIFNVLGCDFHEQLDFLTDIDVV VGWSLGGQLATYLVDFFYKQTGQTKTLITLASNPCFVATDNWQTAMPTDVFSQFKASFLQ NPQATLKRFYYLITLGSSQAKQDWMSVQNIANPPSNELLLAGLQMLEQLNLVDNLKNYLG LQLHLFAEQDNVIPCKIIENFKDFATENMTYKLLKDATHAFPYLQVERTIEEICQFLTIH QQSS >gi|333032605|gb|GL891821.1| GENE 73 84505 - 85785 1447 426 aa, chain + ## HITS:1 COG:NMA0942 KEGG:ns NR:ns ## COG: NMA0942 COG0161 # Protein_GI_number: 15793900 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Neisseria meningitidis Z2491 # 4 420 13 429 433 575 62.0 1e-164 MTDNFDLEHIWHPYTSMTQPLPTFKVKRAYGATIELDDGRTLIDGMSSWWCAIHGYNHPE LNQAVTDQLQNMSHIMFGGLTHDPAIELGKILLKITPPSLDKIFYADSGSVAVEVALKMA VQFWTAQGQPQKTNFITTRSGYHGDTWNAMSVCDPVTGMHQIFGTSLPNRLFVAAPQTKF HEEWNQEDIAELEQAIQQNHENLAALIIEPIVQGAGGMRFYHPEYLRQAKALCEKYHLLL IFDEIATGFGRTGKLFAWEHAQVEPDIMCLGKGLTGGYMTLSATLTTKHVAETISRGEAG VFMHGPTFMANPLACAVALKSTQLLIEQDWQANIKRIEQQLSQYLMSLNQLDYVADVRVL GAIGVVELTFNVDMKTLQQQFVERGIWIRPFGKLVYVMPPYVITQQELSDLLEQLVEVVK TMQGAH >gi|333032605|gb|GL891821.1| GENE 74 85787 - 86944 1064 385 aa, chain + ## HITS:1 COG:PM1901 KEGG:ns NR:ns ## COG: PM1901 COG0156 # Protein_GI_number: 15603766 # Func_class: H Coenzyme transport and metabolism # Function: 7-keto-8-aminopelargonate synthetase and related enzymes # Organism: Pasteurella multocida # 3 385 1 382 387 427 55.0 1e-119 MSLLDHFATELDELKRQGNFRQFTQNVQHGRFITIQNKTMLNLASNDYLGLAADIDLRQE FLDYYPLERSYFSSSSSRLLTGNFDEYEQLENSLSQAFGGRAALLFNSGYHMNIGILPAV ADSKTLILADKLVHASMIDGIRLSGAQYVRYRHNDFQHLEQLLQKYHDDDQIERIIVVTE SIFSMDGDETDLTALVQLKKRFAKTMLYVDEAHSIGVRGQQGLGCAEQYNVIQEIDFLVG TLGKALAAVGGYIICHPIIKDYLINKMRPLIFSTAQPPIVMAWANFIFKKVLMAQSQREH LKNISQYLQQAVVQKGYVSPSTSHIIPVIVGESQATIDKAKQVQESGFYAMPVRPPTVPK NSSRLRISLTSMVEQHELEALVSFL >gi|333032605|gb|GL891821.1| GENE 75 86941 - 87690 475 249 aa, chain + ## HITS:1 COG:PM1903 KEGG:ns NR:ns ## COG: PM1903 COG0500 # Protein_GI_number: 15603768 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pasteurella multocida # 3 246 4 249 251 169 42.0 3e-42 MSLNKDLVAQRFAKAGQSYSKHAIVQKQICQNLTNLLKQFCPSAMSRVFEIGCGSGNLTR LLVESFQIEDLVLNDLYAEVQQHFNHEEHVKWLIGDVETLEFPQQLNMIVSGSALQWMQD LPRLLQHCYAALNEQGWLCFSTFGPRNLIEIKELTGQGLNYWNLENWNSALTQAGFEILH LAQSETQLYFDAPKAVLQHLKATGVTATAQHRWTKQTLQQFYQDYDRFKHAEGYSLTYHP IYCIARRMK >gi|333032605|gb|GL891821.1| GENE 76 87691 - 88335 763 214 aa, chain + ## HITS:1 COG:NMA0943 KEGG:ns NR:ns ## COG: NMA0943 COG0132 # Protein_GI_number: 15793901 # Func_class: H Coenzyme transport and metabolism # Function: Dethiobiotin synthetase # Organism: Neisseria meningitidis Z2491 # 5 214 4 213 215 261 62.0 6e-70 MSGQIYFVSGIDTEIGKTYATGFLAKLWTEQGKKVITQKLIQTGNADISEDIQKHREIMG QGWFQEDHDKLTMPEIFSYPASPHLATRLDNREIDFQKIENATQTLAERFEIVLLEGAGG LMVPLTTSLLTIDYVAQHQFPVILVTSGRLGSINHTLLSLEALKSRGLKLKALVYNLKDE SKDPLISQDTSNYLKDYIAIHFPEAEWIELAKMN >gi|333032605|gb|GL891821.1| GENE 77 88399 - 89322 1260 307 aa, chain - ## HITS:1 COG:ECs1841 KEGG:ns NR:ns ## COG: ECs1841 COG1187 # Protein_GI_number: 15831095 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Escherichia coli O157:H7 # 1 281 1 283 290 276 54.0 4e-74 MSEKLQKVLARIGLGSRRYMEEVIAAGRVSVNGRIAQVGERIEPGDELRIDGRKVQFQIE DEIRRRVLIYYKPEGEICSRNDPEKRPTVFDHLPQIANDRWVMVGRLDINSTGLLLFTND GELANRLMHPSNEIEREYAVRVMGEVTPQLRQNMVNGVELEDGPAKFESFSEIGGEGINR WYQVVVKEGRNREVRRIFESQGLKVSRLLRTRYGTVILPRELRTGRWMELDKTDIDNLAK SVELKPRQGTGLFGMAKRRTERMTEKPMAARRGGYLRQQRRDDEKEAPANTGNQRKSTGF NRGFKKF >gi|333032605|gb|GL891821.1| GENE 78 89364 - 89960 516 198 aa, chain - ## HITS:1 COG:PA3197 KEGG:ns NR:ns ## COG: PA3197 COG1386 # Protein_GI_number: 15598393 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Pseudomonas aeruginosa # 18 181 7 172 332 152 47.0 5e-37 MSSFEQNNNDLSLADIHHEVLLQLEAIIFASEAPVSIARLKEAFNNQYNKQQLRQLLQQL ALLQHGRSIELIETAQGFRFQVRSKYRNIIAQIWPERPTKLSPSLLETLAVIAYHQPVTR ADIEQIRGVSNNSQILRTLFDWNWIKEAGFRDLPGRPALLITTPQFLNAFGLASLGQLPP LQNAKEAFMALDANAPKS >gi|333032605|gb|GL891821.1| GENE 79 89957 - 90724 883 255 aa, chain - ## HITS:1 COG:XF2451 KEGG:ns NR:ns ## COG: XF2451 COG1354 # Protein_GI_number: 15839042 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 17 255 72 315 338 164 39.0 1e-40 MEDVPHIRVLDEWHDTIPEDLYIPPAAFEILLEQFEGPLDFLIYLIQKNGFDLIQLDIAP IATQYLAYMDSMKSLNIELTADYMVMAALLADLKSRLLLPKPTVVSIEKDPKQDLIDRLE TYLRIKQAAERLGQMPVLDRDTFSANVSLGHIAPVYEGYDVSALHDALFCVFNRPEPVTH TIAQEPVLLEERIAYIEEKLESGDVLSFKELLNPQQGRMGMVVTFMAVLELTRQQKIKII ATGVEAPLAIQGSSI >gi|333032605|gb|GL891821.1| GENE 80 90977 - 91594 918 205 aa, chain - ## HITS:1 COG:ECs1839 KEGG:ns NR:ns ## COG: ECs1839 COG0009 # Protein_GI_number: 15831093 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Escherichia coli O157:H7 # 4 204 17 217 218 236 54.0 2e-62 MLHLHVHPENPQQRLIEQAVERIRAGDVVVYPTDAAYAIGCQIGNKNAMERIAQIRGLGP KHQYAIMCCDLSDIATYAKVDNATYRLLKANTPAITTFILPATSEVPRRLMHPKKKTIGL RIPSNPICQALLKELGEPLLTSTLILPGQEDPLDDPYDIENQLAKRIDVFIDGGFGTLTT TSIVDLSGEHPEIIRRGVGDVSAFE >gi|333032605|gb|GL891821.1| GENE 81 91684 - 92163 306 159 aa, chain - ## HITS:1 COG:PM0469 KEGG:ns NR:ns ## COG: PM0469 COG3101 # Protein_GI_number: 15602334 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 3 139 24 159 178 140 51.0 8e-34 MTLVRGEFEPEYFPANDHEPAKIQFAHGFFNSALHEISHWTIAGAKRRLLPDLGYWYAPD GRTKEQQDLFEQVEIKPQAIEWLFAQSFGRKFRVSLDNLTGDGGDGRKFKDNVYAQVQRY FSGEAKLPADAARFIECICQCTRAGAALQLNEFKRELLD >gi|333032605|gb|GL891821.1| GENE 82 92443 - 93003 363 186 aa, chain + ## HITS:1 COG:PA2971 KEGG:ns NR:ns ## COG: PA2971 COG1399 # Protein_GI_number: 15598167 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Pseudomonas aeruginosa # 7 181 7 173 178 74 29.0 1e-13 MSANTFPAQIEPFKWAEQGFTWSGQLPLSRFARIAREAVGSIDNQLINIDCKLSMDAYHR IVWLDGHMETKVPMECQRCLEPVEMPIVSDFHIALVDDESLIERLDEDADFIVLGESESS TKGDFDTPASINLLALLEDELLLLMPLSPKHDACEHKHQPTIQNVVEEKRDNPFDVLAGL KGKLNS >gi|333032605|gb|GL891821.1| GENE 83 93078 - 93263 314 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126640872|ref|YP_001083856.1| 50S ribosomal protein L32 [Acinetobacter baumannii ATCC 17978] # 1 61 1 61 61 125 100 8e-28 MAVQQNRKSRSRRDMRRSHDALTENALTVDQATGETHRRHHVTKDGFYRGRQLFAKAADA E >gi|333032605|gb|GL891821.1| GENE 84 93416 - 94402 1173 328 aa, chain + ## HITS:1 COG:STM1194 KEGG:ns NR:ns ## COG: STM1194 COG0331 # Protein_GI_number: 16764549 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Salmonella typhimurium LT2 # 13 317 2 307 309 269 51.0 5e-72 MSAKRLEQVALATKTAFVFPGQGSQKVGMLAELAEQFSGVGQTFAEASDALGFDLWHIAQ SGEGLDQTENTQPVLLTASIALWRLWLDLGGLAPKYLAGHSLGEYSALVAAGSMSLADAV KLVNLRGKLMQNAVPQGEGAMAAILGLADDKVVELCQSVSALGQGSVEAANYNSQGQVVI AGSTASVQQVMALAKEQSAKAIALPVSVPSHCSLMKPAAEKFAEALEQTAIELPTIPVIQ NVNAGIATDVAQLRQALTAQLYQSVQWTRTMQSLQDQGIQYIVECGPGTVLSNLAKRLPN IEKAFSIDSKSKMEDALNAVLVAEGKIA >gi|333032605|gb|GL891821.1| GENE 85 94399 - 95133 246 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 243 3 242 242 99 29 7e-20 MTQERKVALVTGASRGIGAAIAQQLIQDGYFVVGTATSESGAQKLTDSFGEQGAGLALDV RNLDEIEAVVSHIEQNYGPVLVLVNNAGITKDNLLLRMSEDDWDDILNIHLKAVYRLSKR VLKGMTKARFGRIINISSVVAHFANPGQANYSAAKAGIEAFSRSLAKEMGSRQITVNSVA PGFIATEMTDALSEDIRKKMSDQVALNRLGEPQDIANAVSFLASDKAGYITGTVLHVNGG LYMA >gi|333032605|gb|GL891821.1| GENE 86 95218 - 95454 393 78 aa, chain + ## HITS:1 COG:VC2020 KEGG:ns NR:ns ## COG: VC2020 COG0236 # Protein_GI_number: 15642022 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Vibrio cholerae # 1 74 33 106 110 84 64.0 6e-17 MSDIEQRVKQAVAEQLGLKAEEIKNEASFMDDLGADSLDLVELVMSFENDFDITIPDEDS NEITTVQSAIDYVTKKLG >gi|333032605|gb|GL891821.1| GENE 87 95645 - 96118 680 157 aa, chain + ## HITS:1 COG:PA5178 KEGG:ns NR:ns ## COG: PA5178 COG1652 # Protein_GI_number: 15600371 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Pseudomonas aeruginosa # 1 157 1 145 145 121 48.0 5e-28 MGLFDFVKGIGKKNTAPAEPQAAPATPAEPSAQEIANKLLGLIKSLGLGVEGLSVTYNGS TDTAIIKGQVQSQADKEKIILIVGNVDHVAQVDDQMTVATPEPESKFYTVKSGDNLSKIA KEFYGDANQYQKIFEANKPMLKDPDEIFPGQVLRIPQ >gi|333032605|gb|GL891821.1| GENE 88 96164 - 96931 1025 255 aa, chain - ## HITS:1 COG:PA3975 KEGG:ns NR:ns ## COG: PA3975 COG0351 # Protein_GI_number: 15599170 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Pseudomonas aeruginosa # 2 255 7 259 265 194 47.0 2e-49 MRPTVLCFSGLDPSGGAGLQADIEAIGQSGAHAAIACTALTIQNSQQVFGFEATSKELLL AQANAVVGDLPIKCVKSGMLGTTDNIAALAEFLRAHPDYQYVLDPVLVANSGGSLGDQAT LVKAFVELIPLATLITPNTVELRALTGVTDLDQATQKLFEMGAKAVLVKGGHEDTPDFIK NSLYIDGELAASSTCPRLEGEYHGSGCSLASFIAGRLALGDSLKIAVQHAETWLFGVLKN AETPVLNGQKIPKRF >gi|333032605|gb|GL891821.1| GENE 89 97029 - 97703 838 224 aa, chain + ## HITS:1 COG:all2681 KEGG:ns NR:ns ## COG: all2681 COG0546 # Protein_GI_number: 17230173 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Nostoc sp. PCC 7120 # 1 195 1 195 215 223 56.0 2e-58 MAIKHILIDLDGTLTDPKVGIHTSIRYAMDKLGYPLAADLNIDWTIGPPLKASLAKLLAT QDDALAEQALLAYRERFSVIGLFENEVYPSVAETLKALKAEGYRLFVATAKPTIYAKRIL DHFELSQYFVQIYGSELTGERTNKAELIHYILEREQLNPEECLMVGDRQYDVLGARHNGI EAVAVTYGYGTPEELTQAQPKAKITKFSELLDYVEEQAAQKKVS >gi|333032605|gb|GL891821.1| GENE 90 97768 - 98427 764 219 aa, chain - ## HITS:1 COG:HI0764 KEGG:ns NR:ns ## COG: HI0764 COG0108 # Protein_GI_number: 16272705 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Haemophilus influenzae # 12 219 4 215 215 258 63.0 4e-69 MSSLIQPELFFSALSPAEQRIQQALEDIRQGKPVLVMDDFDRENEADLIVAAETLTVETM ARMIRDGSGIVCLCLTEELADHLELPPMVSQNSSQFHTAFTVTIEAAQGVTTGVSAKDRV TTIKTAIKDGAVATDLNRPGHVFPLRARNGGVLTRRGHTEGTIDLARLAGLKPAGVLCEL TNPDGTMASGIQVLAYAQTHHLTVITIEELVQYRQQHGI >gi|333032605|gb|GL891821.1| GENE 91 98845 - 100626 934 593 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00782 NR:ns ## KEGG: ACICU_00782 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 593 1 593 593 846 100.0 0 MQIRDYYPFRNTLFIQHLHIFSYVFMALSILHLIAANWLMLPDSIQLIIPPVILLITAWV SVKKTLSEGVRQTLHGICGLMVGLSLAVIGQVYQTGADSYLLFLIWTLLLLPWLYRPNIG IFALICITSQLTLFLFFKQAFWAEKFPYLYLFALNLLSLVQFWICQKKYTALRFIFIAWF AVISITGMIQFLSSENLSYLISAFFLGIIAFYYFFNKDDQLCASLMAAVLGVTATIWLVD GINQLFKDSNEFIFLLIAGIIFTWFALISYFLIKIFRQSRFYIIPLAIGAWLAGLALAAF TLVFWETISLIIGIIFVAVAITLLTKSQSYFIRQFAYCLFVSGQTAFLFHLGSETDQILW VLIAQIFILCISYFLKPHWFFILIQMLATYGIAVIYLLQMDHSLWSLNSTQTYLNLVLLN YLVFSSVLLIGSKAVVSYKRSIFLCTLVVIWVSSFFDTFIGLALVDSADQSLWFLYALPC VWLLCFSFFYLYRQLHGITFFAFLVFGILLIALGYFEVFILFVILTWALKNKDRIVYGVT LVVFAFVLWQLYYSLQLSFLAKSASILVSGIILLALYGLLMKEAKINCIEGEK >gi|333032605|gb|GL891821.1| GENE 92 100626 - 101186 542 186 aa, chain + ## HITS:1 COG:YPO2802 KEGG:ns NR:ns ## COG: YPO2802 COG4929 # Protein_GI_number: 16123000 # Func_class: S Function unknown # Function: Uncharacterized membrane-anchored protein # Organism: Yersinia pestis # 2 173 4 176 176 67 27.0 2e-11 MKKYFSLMLAIVTVLFFAGLVMKNEWHLHQSKSIFIKLKPVDPRSILQGDYMALAYELNL QSLKALTGSESEALDQVIFNHASVPAKVILDSRNRVIRTILDPNSLSNEQNLILKNPDNH YQSLYPASRSFLFAEGLAHCYEKAKYAEFKVNAKGEAILFDLRGEELQPLNCKQQQSWWK GTARSL >gi|333032605|gb|GL891821.1| GENE 93 101242 - 101622 495 126 aa, chain - ## HITS:1 COG:PA4731 KEGG:ns NR:ns ## COG: PA4731 COG0853 # Protein_GI_number: 15599925 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Pseudomonas aeruginosa # 1 126 1 126 126 156 59.0 7e-39 MLSRLLKCKIHRAVVTHAELHYEGSCAIDGVLMDLAGIREYEEIHVWNVTNGKRFTTYAI RGEDNSGIISVNGGAAHQADVGDLVIIATFGDFTEAEANAHKPRLVYANPDNTVNHTANC IPVQVA >gi|333032605|gb|GL891821.1| GENE 94 101754 - 102335 619 193 aa, chain - ## HITS:1 COG:PA4672 KEGG:ns NR:ns ## COG: PA4672 COG0193 # Protein_GI_number: 15599867 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Pseudomonas aeruginosa # 1 191 1 193 194 199 58.0 3e-51 MSNISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDV RLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRD IVPHIGPNFHRLRIGIGHPGSKERVSGHVLGKAPSSEQSLMDGAIDHALSKVKLLVQGQV PQAMNQINAYKPA >gi|333032605|gb|GL891821.1| GENE 95 102356 - 102667 510 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126640884|ref|YP_001083868.1| 50S ribosomal protein L25 [Acinetobacter baumannii ATCC 17978] # 1 103 1 103 103 201 100 2e-50 MRIYLMANFVLNAQARAEDKQGKGASRRLRRESLVPAIIYGGNAEPVAVTLELRELVKAL ESNAFFEEVVEIKVGDKVENVKIQALQRHPAKNTPMHADFKRA >gi|333032605|gb|GL891821.1| GENE 96 102752 - 103702 1125 316 aa, chain - ## HITS:1 COG:PA4670 KEGG:ns NR:ns ## COG: PA4670 COG0462 # Protein_GI_number: 15599865 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Pseudomonas aeruginosa # 1 313 1 312 313 441 73.0 1e-124 MPNLVVFSGNAHPQFAQKVVSHLHIPLGAASVGQFSDGEISVEITENVRGKDVFIVQPTC APTNDNLMEILVMADALRRASAGRITAVIPYFGYARQDRRPRSARVPITAKVVADMLTTV GIDRVVMIDLHADQIQGFFDIPVDNIYGTPALLADLRQQQHDNLMVVSPDVGGVVRARAV AKQMGDIDLAIIDKRRQKANESQVMHLIGDVKDRDCVIVDDMVDTAGTLCKAADALKQFG ARRVVAYATHPVLSGKAIENLRNSVIDELVVTDTIPLSEEALNLGKIRQVSVASMVAETI RRINNEESISAMFDSL Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:24:52 2011 Seq name: gi|333032604|gb|GL891822.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld10, whole genome shotgun sequence Length of sequence - 41153 bp Number of predicted genes - 37, with homology - 36 Number of transcription units - 20, operones - 10 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 838 - 1893 1073 ## COG2067 Long-chain fatty acid transport protein - Prom 1925 - 1984 5.0 2 1 Op 2 . - CDS 1991 - 2680 434 ## ACICU_01816 hypothetical protein 3 1 Op 3 2/0.200 - CDS 2667 - 4040 1323 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Term 4212 - 4248 1.2 4 2 Tu 1 . - CDS 4399 - 5004 598 ## COG1309 Transcriptional regulator - Prom 5217 - 5276 10.2 + Prom 5237 - 5296 10.5 5 3 Op 1 . + CDS 5439 - 6686 1457 ## COG1748 Saccharopine dehydrogenase and related proteins 6 3 Op 2 . + CDS 6683 - 7990 1507 ## COG1231 Monoamine oxidase 7 3 Op 3 . + CDS 7996 - 9537 1325 ## COG2072 Predicted flavoprotein involved in K+ transport 8 3 Op 4 . + CDS 9618 - 10532 724 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 10572 - 10614 1.2 9 4 Tu 1 9/0.000 - CDS 10625 - 12022 506 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 - Term 12048 - 12091 11.0 10 5 Op 1 27/0.000 - CDS 12099 - 15209 2720 ## COG0841 Cation/multidrug efflux pump 11 5 Op 2 . - CDS 15206 - 16396 1302 ## COG0845 Membrane-fusion protein - Prom 16613 - 16672 2.9 + Prom 16299 - 16358 3.9 12 6 Op 1 40/0.000 + CDS 16542 - 17285 596 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 13 6 Op 2 . + CDS 17317 - 18390 959 ## COG0642 Signal transduction histidine kinase + Prom 18428 - 18487 10.2 14 7 Tu 1 . + CDS 18514 - 19509 968 ## ACICU_01828 RND type efflux pump - Term 19470 - 19519 4.7 15 8 Tu 1 . - CDS 19583 - 20635 753 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 20873 - 20932 3.5 + Prom 20633 - 20692 4.9 16 9 Op 1 1/0.200 + CDS 20800 - 21714 713 ## COG1073 Hydrolases of the alpha/beta superfamily 17 9 Op 2 10/0.000 + CDS 21745 - 22605 749 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 18 9 Op 3 . + CDS 22651 - 23493 846 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 23500 - 23544 5.1 - Term 23361 - 23397 -0.9 19 10 Tu 1 . - CDS 23595 - 23891 154 ## ACICU_01833 hypothetical protein - Prom 23955 - 24014 6.6 + Prom 23952 - 24011 5.6 20 11 Op 1 . + CDS 24106 - 24945 634 ## COG4104 Uncharacterized conserved protein 21 11 Op 2 . + CDS 24942 - 25643 451 ## ACICU_01835 hypothetical protein + Term 25651 - 25694 4.7 - Term 25639 - 25680 4.3 22 12 Op 1 . - CDS 25771 - 25908 79 ## ACICU_01836 hypothetical protein 23 12 Op 2 . - CDS 25901 - 26395 473 ## ACICU_01837 putative DNA-binding protein (Roi) 24 12 Op 3 . - CDS 26464 - 27567 515 ## ACICU_01838 hypothetical protein - Prom 27594 - 27653 6.0 - Term 27595 - 27619 -1.0 25 13 Tu 1 . - CDS 27757 - 28317 398 ## COG1309 Transcriptional regulator - Term 28980 - 29035 5.4 26 14 Tu 1 . - CDS 29041 - 29352 267 ## COG1396 Predicted transcriptional regulators - Prom 29373 - 29432 8.8 + Prom 29563 - 29622 7.5 27 15 Tu 1 . + CDS 29648 - 30088 419 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases + Term 30091 - 30125 0.4 - Term 30078 - 30113 3.1 28 16 Op 1 . - CDS 30123 - 30767 688 ## ACICU_01842 hypothetical protein 29 16 Op 2 . - CDS 30779 - 31747 992 ## COG0496 Predicted acid phosphatase - Prom 31815 - 31874 4.3 - Term 31812 - 31856 4.1 30 17 Op 1 . - CDS 31877 - 33040 752 ## ACICU_01844 hypothetical protein 31 17 Op 2 . - CDS 33033 - 34361 1132 ## COG1538 Outer membrane protein 32 17 Op 3 . - CDS 34358 - 35944 1495 ## ACICU_01846 hypothetical protein 33 17 Op 4 . - CDS 35941 - 36762 550 ## ABBFA_001683 hypothetical protein 34 18 Op 1 19/0.000 - CDS 36917 - 38464 1171 ## COG0477 Permeases of the major facilitator superfamily 35 18 Op 2 . - CDS 38489 - 39550 942 ## COG1566 Multidrug resistance efflux pump - Prom 39577 - 39636 4.1 - Term 40097 - 40137 -0.2 36 19 Tu 1 . - CDS 40212 - 40478 187 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases + Prom 40810 - 40869 8.0 37 20 Tu 1 . + CDS 40933 - 41067 89 ## Predicted protein(s) >gi|333032604|gb|GL891822.1| GENE 1 838 - 1893 1073 351 aa, chain - ## HITS:1 COG:BMEI1025 KEGG:ns NR:ns ## COG: BMEI1025 COG2067 # Protein_GI_number: 17987308 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Brucella melitensis # 141 338 17 221 296 79 25.0 1e-14 MNEITTKKANPILLGVLGVFVSNISHASALEQSGQSILPFLENGNYAEANLFAVDSSVSG VVNDRADLVRDHQSRDTGDIAESTQFYTAAIKLKLTDRLGFGVLYDQPFSADIKYPARSN NSYFDNDISYEGTSVKADTQNLSLLFGYSPYQLFQIYGGPVYQTVKANVALRGNAYTQAF NGYNAKFKQQGEVGWLLGGSYQLPDIALKAAITYRSKIKYKFQVEEDIFGEPLKLVENEK TKLETPASLNIDFQTGISEKSLVYMNLRWVNWKEFETRPPQYGALSEIIMKEVTGGAYTQ GFKLDSYQNDQYSATVGLAHQFKEKWGASTDVSWDSGTGDPASTMGPIKGS >gi|333032604|gb|GL891822.1| GENE 2 1991 - 2680 434 229 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01816 NR:ns ## KEGG: ACICU_01816 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 229 1 229 229 395 100.0 1e-108 MDSIKQYDDGHVFTAWVALIGTVMAATCLLCFLAVTGFDLHQIFKPEFALTLSAKDQALF RTSMISDCFGFYLPFLAVGVYLWRKLRPSGGLLSDIAILFLVISTMLGITGAALQASVLG PLAETYMSGNEIAKQAAGTVWATISQGSQNGLWPMEGPTIGFWAIVNGLLLRKNKSVLGF PLVLVGLGYVGFAVLLFSGFSQAALFLELFLLPVQVVWLGIFGLSLLQR >gi|333032604|gb|GL891822.1| GENE 3 2667 - 4040 1323 457 aa, chain - ## HITS:1 COG:mll2947 KEGG:ns NR:ns ## COG: mll2947 COG0665 # Protein_GI_number: 13472601 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Mesorhizobium loti # 10 409 10 406 461 154 30.0 5e-37 MNNIPHANKSFWLAHSGEYIPSPPLRGSIDVDVVIIGGGFTGLSTAYHIRKVDSAASVAV LEGECVAFGASGRTSGWVVPVPVLDPTTAKVLYGKERLTELQNFAWNGLDYVQDLIKREN MDSDFEMPGVTFTTLRGHEKRLEHFTKYWQDQPRSKDSVYMDRATVSQALNSDAFSGGCR MPHSGQVNPVKHSRELKRIAEQAGAQIFEQTPVLDIEDKETFFILKTPEGEVRAKHIVLG TNGFTHLLPPELGLKRAQLPMFVYQLITEPLTDEDWKALGWKHRGQFYDKTTYCPPTCRT TVDGRLQFNLCDIYVGEGRSMDEAQKVQFYDAAERMYKKVFPAFQKLKIAQRWSGACSIP FDVRSQVGTLHNGRISYAYGYSGAGVMMSQNYGRILADLALQRKTELTEHWFVANGEKGH AKFKRFPLIPGLIAALRTYFEYERVSALSRRRRLGLD >gi|333032604|gb|GL891822.1| GENE 4 4399 - 5004 598 201 aa, chain - ## HITS:1 COG:MT3970 KEGG:ns NR:ns ## COG: MT3970 COG1309 # Protein_GI_number: 15843486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 201 15 215 216 78 29.0 8e-15 MTVNRRRPKHDPKESEREILNAAEKFLSERPFRELNVDEVMKLTGLKRPAFYVHFRDKYD LALRVVQDIGQELFTLANHWLKGNNFPEDSLQALQGIVNVYQKHGAVLRALSDAAGADER VEQIYRSLIQDFITATARHICEEQENGRISLELNVDETARALVWLEERYLSEAFGRTPQA DPIVVVQVLHNIWISTLYRTN >gi|333032604|gb|GL891822.1| GENE 5 5439 - 6686 1457 415 aa, chain + ## HITS:1 COG:AF1588 KEGG:ns NR:ns ## COG: AF1588 COG1748 # Protein_GI_number: 11499183 # Func_class: E Amino acid transport and metabolism # Function: Saccharopine dehydrogenase and related proteins # Organism: Archaeoglobus fulgidus # 66 251 63 252 408 83 30.0 9e-16 MSRRIIFIGAAGEMCRLAIERFAKAKGDWELVLCDIRPELLSNLVEKLPQGLATTQHLDL YDKQKLQAVVNGADLVVLGAGPYIRTSAPVIEACLEAKVPYLDFDDDVESTEHALSLHEK AKEAGIPIYVGCGASPGMANVLVVDAANELDTVENIDCCWMVGDERPGIGRAVLEHFLHI TAGDCLTWENGKRVNHETFVETGTAPMGGGLGEILMYETAHPEPVTLPRKYPTAQRIRCL GGLHPAPFNGLGRGVGLAVHHGEMTVKEGVDFLEDLLNNKLGSAKGWKAAISGMIGQVKR KESSFSAMVEFLTKSAIGKTYPYKGGLLARVYGTKNGRPAVAIRRTVKSGEDSYLMRDMA AITGTACAAFMVLALDETGKRSGTFAPEDWAEPEAFYTALERVGTPRAEIVESVL >gi|333032604|gb|GL891822.1| GENE 6 6683 - 7990 1507 435 aa, chain + ## HITS:1 COG:MT3259 KEGG:ns NR:ns ## COG: MT3259 COG1231 # Protein_GI_number: 15842747 # Func_class: E Amino acid transport and metabolism # Function: Monoamine oxidase # Organism: Mycobacterium tuberculosis CDC1551 # 7 429 15 454 454 67 25.0 4e-11 MKKYDYDIAVIGAGCAGVVAARDLSNAGHKVVLLEARDRIGGRTYTGEAFGRQVEFGGGY SHWTQPYIWRELQRYGIGLNPPTEVDKTVWFADGKLHTGTQAEYAAIAEPLLTAFFNDAR QWFPLPYDVNAIDTSDIEKQTLRDRLDTLNLSTYERDVLDGLLSTLVHSWDEQGVAQLLF WAATYFGNWGAFFEVAGSWPIAGGTQKLVRAIYNDSGAELRLTTSVAAIDDQGEQVVITT QSGEKIVTKKALVAVPLNVLSDIKITPEVNKPARDMIVAKHPMRTAKLWARVRGKIEPFI GFAPVEQNPINTVRVEYEHEDDSILVCFISDESTIDVNDIEAVQKALQMFKPDIEVLDIA SHNWAKDPYAQGTWVHYRPGHLSDAAPLMRKPHGNIYFAGGDIATMSMGGIEGALESGIE TAASITHALAQKLAG >gi|333032604|gb|GL891822.1| GENE 7 7996 - 9537 1325 513 aa, chain + ## HITS:1 COG:CC2569 KEGG:ns NR:ns ## COG: CC2569 COG2072 # Protein_GI_number: 16126807 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Caulobacter vibrioides # 14 489 7 479 498 507 51.0 1e-143 MNRKTDFTQSLDAEVLIIGAGIAGISAAYHLKKYRPNSTFIILEGRDDIGGTWSLFRYPG IRSDSDMQSFAFGFKPWTQKKTFGSAQMICDYLHETVTENGIDQYIQFGSYVTSAEFSSN EGIWTVKVKQKDQKSLVTLRSRFLLMGTGYYDYNNGYTPDFKGTEEFKGQIVHPQHWPEN LNYSGKKVVVIGSGATAVTLIPAMAKDVEHITMLQRSPGYVVAMPSVDPIAVALNTVLSP QRAYEIIRRKNIAISRGIYKLCHRFPKVMRHLLIADVRRRLPKDFDVSTHFSPKYNPWDE RLCVVPDGDMFKAISSGKASVVTDHIDRFIKEGILLKSGKVLEADIIITATGLNMLAFSK IQLTVDGKKINYPDTTIFKSMMLSDIPNFAFAFGYTNIAWTLKVDLVWQHFCRLLDYMDE NKYGTFTPIIHNKTMKRVPFVDLSPGYVQRGLAQFPMAGTEGPWTLQHDYKVDFERLNKG PVCDKELKFTALVPKKKLTVVTETSSEELMVKA >gi|333032604|gb|GL891822.1| GENE 8 9618 - 10532 724 304 aa, chain + ## HITS:1 COG:AF1563 KEGG:ns NR:ns ## COG: AF1563 COG1073 # Protein_GI_number: 11499158 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Archaeoglobus fulgidus # 3 298 19 293 294 164 38.0 2e-40 MENIKFISKGITCSAWYIPATTDKYMNSRGRPCVVMANGFGGTKDTGLLNFAEPLSKAGF DTFIFDYRGFGESGGFPRQNVSYKNQREDYHAAIAAVRSLPNIDRNRIALWGTSYSGGHV LVAAAQDQKISAVISMNPATDGLAALSQICRYGGLKQLTVAVAHGLKDLAYSLLGQKAHL IPIVGQPGTAAIISTPGSEVSYKAMAGPTWRNEVCARTALEVARNRPINFAHQIKCPLLV QVGSNDQVTPPEAARKSASLANGEVKLLEYPIDHFDFYNEPWQIKILEDQINFLTQALAR PRVR >gi|333032604|gb|GL891822.1| GENE 9 10625 - 12022 506 465 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 16 461 9 455 460 199 29 2e-50 MSKSTIVSRGLILSTLSIALVACVNMQAPQPAITSHIPQNFSQNHSGKMIAEKSYKEFIS DPKLLQVIEISLNNNRDLRTATLNIERVQQEYQITKNSQLPTIGVTGNAVRQVSPSINPN NPVSTFQVGLGMTAYELDFWGRVQNLKDAALNNYLATQSAKEAVQIGLISNITQVWLNYA FAQANLNLAEQTLKAQVDAYNLNKKRFDVGIDSEVPLKQAQISVETARNDVATYKTQIQQ AKNLLDLLAGHPVPQNLLPDHAIQNITFEKNFAAGLPSDLLNHRPDLKAAEYELRVAGAN IGAAKARMFPTISLTGSTGYASSELKDLFKTGNFAWSIGPNIDLPIFDWGTRKTNIKIAE TDQKIALAKYEKAIQSAFREVNDALATHAHIGERLDAQRRLVSATAATYKLSMARYKAGV DSYFTVLDAQRSAYAAQQGLLALEQIKLNNQIEIYKVLGGGISKV >gi|333032604|gb|GL891822.1| GENE 10 12099 - 15209 2720 1036 aa, chain - ## HITS:1 COG:RSp0312 KEGG:ns NR:ns ## COG: RSp0312 COG0841 # Protein_GI_number: 17548533 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Ralstonia solanacearum # 2 1010 1 1011 1049 1204 63.0 0 MMSQFFIRRPVFAWVIAIFIIIFGLLSIPKLPIARFPSVAPPQVNISATYPGATAKTIND SVVTLIERELSGVKNLLYYSATTDTSGTAEITATFKPGTDVEMAQVDVQNKIKAVEARLP QVVRQQGLQVEASSSGFLMLVGINSPNNQYSEVDLSDYLVRNVVEELKRVEGVGKVQSFG AEKAMRIWVDPNKLVSYGLSISDVNNAIRENNVEIAPGRLGDLPAEKGQLITIPLSAQGQ LSSLEQFKNISLKSKTNGSVIKLSDVANVEIGSQAYNFAILENGKPATAAAIQLSPGANA VKTAEVVRAKIEELKLNLPEGMEFSIPYDTAPFVKISIEKVIHTLLEAMVLVFIVMYLFL HNVRYTLIPAIVAPIALLGTFTVMLLAGFSINVLTMFGMVLAIGIIVDDAIVVVENVERI MATEGLSPKDATSKAMKEITSPIIGITLVLAAVFLPMAFASGSVGVIYKQFTLTMSVSIL FSALLALILTPALCATILKPIDGHHQKKGFFAWFDRSFDKVTKKYELMLLKIIKHTVPMM VIFLVITGITFTGMKYWPTAFMPEEDQGWFMTSFQLPSDATAERTRNVVNQFENNLKDNP DVKSNTTILGWGFSGAGQNVAVAFTTLKDFKERTSSASKMTSDVNSSMANSTEGETMAVL PPAIDELGTFSGFSLRLQDRANLGMPALLAAQDELMAMAAKNKKFYMVWNEGLPQGDNIS LKIDREKLSAFGVKFSDVSDIISTSMGSMYINDFPNQGRMQQVIVQVEAKSRMQLKDILN LKVMGSSGQLVSLSEVVTPQWNKAPQQYNRYNGRPSLSIAGIPNFDTSSGEAMREMEQLI AKLPKGIGYEWTGISLQEKQSESQMAFLLGLSMLVVFLVLAALYESWAIPLSVMLVVPLG IFGAIIAIMSRGLMNDVFFKIGLITIIGLSAKNAILIVEFAKMLKEEGMSLIEATVAAAK LRLRPILMTSLAFTCGVIPLVIASGASSETQHALGTGVFGGMISATILAIFFVPVFFIFI LGAVEKLFSSKKKISS >gi|333032604|gb|GL891822.1| GENE 11 15206 - 16396 1302 396 aa, chain - ## HITS:1 COG:RSp0313 KEGG:ns NR:ns ## COG: RSp0313 COG0845 # Protein_GI_number: 17548534 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 13 375 16 376 385 278 45.0 1e-74 MQKHLLLPLFLSIGLILQGCDSKEVAQAEPPPAKVSVLSIQPQSVNFSENLPARVHAFRT AEIRPQVGGIIEKVLFKQGSEVRAGQALYKINSETFEADVNSNRASLNKAEAEVARLKVQ LERYEQLLPSNAISKQEVSNAQAQYRQALADVAQMKALLARQNLNLQYATVRAPISGRIG QSFVTEGALVGQGDTNTMATIQQIDKVYVDVKQSVSEYERLQAALQSGELSANSDKTVRI TNSHGQPYNVTAKMLFEDINVDPETGDVTFRIEVNNTERKLLPGMYVRVNIDRASIPQAL LVPAQAIQRNISGEPQVYVINAQGTAEIRPIEIGQQYEQFYIANKGLKVGDRVVVEGIER IKPNQKLALAAWKAPAVANHASSVETKTSIAEGAQP >gi|333032604|gb|GL891822.1| GENE 12 16542 - 17285 596 247 aa, chain + ## HITS:1 COG:RSp0314 KEGG:ns NR:ns ## COG: RSp0314 COG0745 # Protein_GI_number: 17548535 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Ralstonia solanacearum # 14 237 28 252 256 238 51.0 8e-63 MFDHSFSFDCQDKVILVVEDDYDIGDIIENYLKREGMSVIRAMNGKQAIELHASQPIDLI LLDIKLPELNGWEVLNKIRQKAQTPVIMLTALDQDIDKVMALRIGADDFVVKPFNPNEVI ARVQAVLRRTQFANKVTNKNKLYKNIEIDTDTHSVYIHSENKKILLNLTLTEYKIISFMI DQPHKVFTRGELMNHCMNDSDALERTVDSHVSKLRKKLEEQGIFQMLINVRGVGYRLDNP LAVKDDA >gi|333032604|gb|GL891822.1| GENE 13 17317 - 18390 959 357 aa, chain + ## HITS:1 COG:RSp0315 KEGG:ns NR:ns ## COG: RSp0315 COG0642 # Protein_GI_number: 17548536 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 6 313 5 308 360 219 37.0 8e-57 MKSKLGISKQLFIALTIVNLSVTLFSVVLGYVIYNYAIEKGWISLSSFQQEDWTSFHFVD WIWLATVIFCGCIISLVIGMRLAKRFIVPINFLAEAAKKISHGDLSARAYDNRIHSAEMS ELLYNFNDMAQKLEVSVKNAQVWNAAIAHELRTPITILQGRLQGIIDGVFKPDEVLFKSL LNQVEVLSHLVEDLRTLSLVENQQLRLNYELFDFKAVVEKVLKAFEDRLDQAKLVPELDL TSTPVYCDRRRIEQVLIALIDNAIRYSHAGKLKISSEVVSQNWILKIEDEGPGIATEFQD DLFKPFFRLEESRNKEFGGTGLGLAVVHAIIVALKGTIQYSNQGSKSIFTIKISMNN >gi|333032604|gb|GL891822.1| GENE 14 18514 - 19509 968 331 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01828 NR:ns ## KEGG: ACICU_01828 # Name: not_defined # Def: RND type efflux pump # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 331 1 331 331 671 100.0 0 MDRFKAILLITSTCLTTTLYAKQQVVCVFDPIGKSGDAFALAKDYALEAKNWGADLSLKA YVDERVAAEDLKVGKCDGAIISGLRGRQFNKYTGSLDAVGALTNMKTAINAYKLLSSPMA AKNMVVGPYEIAGLGTIGPAYLFVNDRSINTLAKAAGKKIGVFKYDEAQPKLVQHVGGQA VSVDVTNAGAKFNNHEIDIVPAPIVAFKPFELYKGLGEKGAIVRFPLTQISANFIIRKDQ FPAGFGQKSRTWVASQLNRTFGIIAKYESDIPSKYWMDIPKNEQLNYMKMMREARIQLTK AGIYDPKMMNFLKKVRCKENPSNFECALNDE >gi|333032604|gb|GL891822.1| GENE 15 19583 - 20635 753 350 aa, chain - ## HITS:1 COG:PA3027 KEGG:ns NR:ns ## COG: PA3027 COG2207 # Protein_GI_number: 15598223 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 27 348 9 339 343 151 31.0 2e-36 MGAKLELYGMNGLNKPLYRRRISEIYVQLLFEYLEKLGHDPEKVLGEPWPKADSNHLEGV DIDHWESLLIIAKDYLNDPFIGLHVGQTITAQHLGVLGSVFLACENLGAVLERFERYQRL VYDVYPATVRIYTEYVELSWDTKGEQVGPLSDETGRTVIVQFCRSLIRGKERLKEIHFIH ERPENVQPYEEYFGCPVLFEQPVALMRFDKEILSLPLKNSDAALVAILEKHADKLLASLP HIDEITDQVRKQIAYLLHQGEPTIEQLAERLNYSRRTLQRRLTEAGTNFRKELNTVRYEL AKSYLKDLRLQIVEIALLLGYAEHSPFTRAYKEWSGKTPQQAREEMNELR >gi|333032604|gb|GL891822.1| GENE 16 20800 - 21714 713 304 aa, chain + ## HITS:1 COG:AF1563 KEGG:ns NR:ns ## COG: AF1563 COG1073 # Protein_GI_number: 11499158 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Archaeoglobus fulgidus # 13 299 18 291 294 198 39.0 1e-50 MGKSLNNVPQAPLDVQFDSNDVKCSAYLYRPTTEVATPMIVMAHGLGGTRRMRLTAFAER FVAEGYACLVFDYRYFGDSEGQPRQLLDIKSQLEDWKAAIAYARSLDKIDPNRVVIWGTS FGGGHVLATAANDNRLAAVISQCPFTDGFSSSMAMNPITTLKLMGLALKDKIGSILGAKP VMVPLAAPSGHTALMNAPDAYSGYLALMPSGSNIPNYVAARFVLDIIRYYPGRKTSRIQA PVLFCVCDTDSVAPSKTTLRHASHTPNHEIKHYADGHFEIYVGEAFERVVRDQIDFLKRI VPVK >gi|333032604|gb|GL891822.1| GENE 17 21745 - 22605 749 286 aa, chain + ## HITS:1 COG:MT2187 KEGG:ns NR:ns ## COG: MT2187 COG1028 # Protein_GI_number: 15841620 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis CDC1551 # 5 280 21 292 310 128 31.0 1e-29 MKYDLNKKVVLITGAAGGIGAATAREFYALGANLVLTDMQQEAVDKLASEFEASRVLPLA LDVTDAVATKDVVQKTIKHFGHLDIAFANAGISWRDGASTIASCDEAEFDKIIEVDLLGV WRTVRAALPEVTRNKGQILITSSVYCFVNGMANAPYAASKAAVEMLGRCLRTEIAYTGAT ASVVYPGWTATPIAKVAFGGNATVTKMIEAAFPAWLRKPISPEYMAQAIVKGVQRRQPRI FAPVRWVPFSILRGMFNAASDAMVVRHKKLQGLLQQLESESKPVQK >gi|333032604|gb|GL891822.1| GENE 18 22651 - 23493 846 280 aa, chain + ## HITS:1 COG:MT2187 KEGG:ns NR:ns ## COG: MT2187 COG1028 # Protein_GI_number: 15841620 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis CDC1551 # 6 239 21 256 310 149 37.0 4e-36 MSKYKLKDKVVVITGSTGGLGLAIAQALQAKGAKLALLDLDLNKVESQAKQLGGQSIAAG WVADVRSLESLEMAMANAAQHFGKIDVVIANAGIATTEALEHMAPETFERTIDINLTGVF RTFRAAIPYVKQTQGYLLAVSSMAAFVHSPLNTHYTSSKAGVWALCDSLRLELKYSNIDV GSLHPTFFKTPMMDSIQNDPAGKAVWKGNSGIWKYITIDEVVSGVVESIERRKDMTVVPK INTPIAKAPALFRNVIEFLGFNRKQLKQTMQLAEKNHNSF >gi|333032604|gb|GL891822.1| GENE 19 23595 - 23891 154 98 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01833 NR:ns ## KEGG: ACICU_01833 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 98 1 98 98 133 100.0 3e-30 MKSFLIYDSLIKRYVLLTVGLIVIAFMIAIFFKGELEIDFAIGAVCGYLNIFLLLKNYRF PLIPEVKEDSDDLVMYTRVSLLIFFVLIEFGFLLAALF >gi|333032604|gb|GL891822.1| GENE 20 24106 - 24945 634 279 aa, chain + ## HITS:1 COG:RSp0765 KEGG:ns NR:ns ## COG: RSp0765 COG4104 # Protein_GI_number: 17548986 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 81 1 83 89 61 44.0 2e-09 MTTPYITIGCPTSGGGQVISGNNMFLIDGIPVACVGDKATCPTHKVVATIVSGDPCMQIF GKAAARVNDSLSCGCKLLPQQNLVVQDNGGGAASSAAKSSSAPISQKQPATDSFVKDEYE NYYIEQNTTKYVKFTNGIFPYDEDKKNLFGAISQAVSGVCTFIVTYILKGQELFVTVSML PPTLSGDATIFPYATLDLVHNNQSLGKTRLEKGKGVWSTENSKEPVGQCKVTLPKPDLST IEATLTMGYTAKFDGGTVRPNPPHTRFSFTLNSASRRKS >gi|333032604|gb|GL891822.1| GENE 21 24942 - 25643 451 233 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01835 NR:ns ## KEGG: ACICU_01835 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 233 1 233 233 384 100.0 1e-105 MNRKLISTIVLISVFGVTACSKASNEQAKVDTTEKSSSQNVKTELSASDKAILDRYETIT NEVVTAGEDEKIKQTLAPLIPEIKKVTAKKQREMALMNIYMLSGMYKEAYELNEQQIKEK PLPQRIMFRCTLLEKLNEAKVKIQQCHEASAQLIQTELSKSSSKNDPQYRDAEFVYLTEM YKAGHTDYKAKIQKFIDETKDVASKDKYKSLYDADIESFYGTDSPNYVPESLK >gi|333032604|gb|GL891822.1| GENE 22 25771 - 25908 79 45 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01836 NR:ns ## KEGG: ACICU_01836 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 45 1 45 45 75 100.0 6e-13 MHNLGNKKALQRILGGIKELWIANTRSINTEQYRIRVWEKSSLRY >gi|333032604|gb|GL891822.1| GENE 23 25901 - 26395 473 164 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01837 NR:ns ## KEGG: ACICU_01837 # Name: not_defined # Def: putative DNA-binding protein (Roi) # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 164 1 164 164 323 100.0 2e-87 MSITVLKNDSLINYFSDDAVATGQIQLTDPMQLLADPNLLRNALLTYSEKVIELEHKVEV MQPTMEAFARIARAEGSMCLTDAAKALQQEPHKFNKWLHMNDWIYKRHGSKHWVAYQEKI KAGYLEHKVKDIQLPDGTIKITEQVRVTPKGLTKLSKLLGNNNA >gi|333032604|gb|GL891822.1| GENE 24 26464 - 27567 515 367 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01838 NR:ns ## KEGG: ACICU_01838 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 367 1 367 367 649 100.0 0 MYSKNNVLLPSKSAYSLEEACKELNLFFNRDDIDIRYILDLVHQGHIWMHAKFSKNNYLF AIPMEWELDENFNNENEKRIEEILFFNRMLNYQNIYNKMGDYDLYLKLTLETAFDLLNNK IIIKPLILDIYDPCEYFYLCDNYLKIDSGYYLEFKKYPKGLKRDEYFDTVLINHSEKEII KKMSFFEIYDEIYNGTEFADLYYEFPEVMEIVEIQNRHATDRIDKFKWKKGWEKYYWYGD KQLEDFEMEYNLEDIYILKEDMDFLKRGESRKIRERKDYMSPHIRKQYEKLDVRSNYTSK NSISNKSINKIIYALANMANIDISQPQAAFSQLQLYCEKNNLELPNKDTCGKAFKDAKYY FDNFNSK >gi|333032604|gb|GL891822.1| GENE 25 27757 - 28317 398 186 aa, chain - ## HITS:1 COG:PA3034 KEGG:ns NR:ns ## COG: PA3034 COG1309 # Protein_GI_number: 15598230 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 12 72 8 68 185 58 37.0 9e-09 MPNLVLPTRALKVVNTSIELFHRRGFHIVGVDRLVKESEITKATFYNYFHSKERLIEICL MVQKERLQEKVVAMVEYDHDTNAIDKLKKLYILHTDVDGLYYLLFKAIFEIKNTYPNAYT TAVRYRTWLINEIYNQLRVLKPDASFTDAKLFLYMIEGAIIQRLSSDEVDERMVEVFLRG MSATKI >gi|333032604|gb|GL891822.1| GENE 26 29041 - 29352 267 103 aa, chain - ## HITS:1 COG:VC0814 KEGG:ns NR:ns ## COG: VC0814 COG1396 # Protein_GI_number: 15640832 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Vibrio cholerae # 6 103 60 157 159 74 40.0 5e-14 MKKLTIQTQDRQQILIDLYKQYLLSEITLGQLLSYLRKNVLGLSQEQYANLVGISRRTLT DIEQDKGKLTQSVLDKVFKPLGLKAGLVPTHEHIVSKIIKPNE >gi|333032604|gb|GL891822.1| GENE 27 29648 - 30088 419 146 aa, chain + ## HITS:1 COG:CC1553 KEGG:ns NR:ns ## COG: CC1553 COG0317 # Protein_GI_number: 16125800 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Caulobacter vibrioides # 17 127 53 174 742 59 31.0 2e-09 MTQNKVELAEKLSKESHQGQKYGPHDYFDYHIKGVVNSLIEHQFSEVYIITALLHDSVED TPLTLAKIESLFGKEVRDAVDALTKRETETREEYLIRCSSNPIARVVKLHDAAFNAHNSH KESNQSRVDYYLQTMLIVSTAQDKLR >gi|333032604|gb|GL891822.1| GENE 28 30123 - 30767 688 214 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01842 NR:ns ## KEGG: ACICU_01842 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 214 1 214 214 379 100.0 1e-104 MKRCLLVLLLGLGLAACNDNDHDDQVSTEKPVLTPSLDVGTYIISTETDQELPMAGKYYS GADGTKLLVLDDDENRAKIVMSYDTKTKAWRSNQSNQAMTVELAHYEKIADQKLLLNQLV GTYDLSFPDGTTVNAEVSAQGKIVSKDPNCVFTGVITETALANTANYQLTDNKCDALKNN SKGYVVVDEDLEPMSFRLVSDTIASKDIWAFAQS >gi|333032604|gb|GL891822.1| GENE 29 30779 - 31747 992 322 aa, chain - ## HITS:1 COG:CC1998 KEGG:ns NR:ns ## COG: CC1998 COG0496 # Protein_GI_number: 16126241 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Caulobacter vibrioides # 21 300 1 238 263 70 25.0 5e-12 MKKSLLGGLILSLCTTPAFALNILLVNDDGLTSNIKALYDELKANGHNVLVSVPCSPQSG RGGAIVMYSSTTITADNDKQIAAENGCHNGAAPIGAPAAGTFTKAGYTNGDWNYTHGTPV MATVYGLDVVAPKRWGKAPDLVLSGPNEGQNVGKVVVHSGTIGNVQFSAGRGIPSIALSA DTNTVDDKTLNNPNSAIVAKQTVVLLKELQAKAGKGQLLPKGITLNVNFPKNLTTSTPFA FSKIGTYDLYKLKFQVTKDNKGNNQFGLGIDAAPSAPTASQMSDESAVMQSKIAVTAMQV AYDQRPAGQEWLKIRLKSLFNK >gi|333032604|gb|GL891822.1| GENE 30 31877 - 33040 752 387 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01844 NR:ns ## KEGG: ACICU_01844 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 387 1 387 387 788 100.0 0 MNKTNPPLTDNTLITREATLADDEALRELIAVPMTTKGIQISFQREPSYFKASDIVYRHK LHVVIEDTESQKKVACYSNGYRPCYINRNIQNLRYAGDLRVDHSYRGKSLVKVLGKHVKQ TMHEPNYSQMIIFDDNHAARAAIQTGKTGMPDYYDEGLIETLSLTSTGAKRKITAFLKQN SQQSNLQEIRTCVAEAKHVPAMNQFISDMAEHYNFIPAYNFEELAQGHQYFSGIKLSDFS LYFKGEKLVGMFGLWDQHSIKQTKILNYSSAIAVLRPVYNLLTPITKGMRLPKLGDSIQY HVLHTLMCHPEDLALHHKMLEDAYNKSKQQGVGVVSFTLSHKDPRYQLNQFYKGERLTGM HGFISFEGDPRPSFDKKLIPYLEVGRI >gi|333032604|gb|GL891822.1| GENE 31 33033 - 34361 1132 442 aa, chain - ## HITS:1 COG:CC1318 KEGG:ns NR:ns ## COG: CC1318 COG1538 # Protein_GI_number: 16125567 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Caulobacter vibrioides # 26 427 26 431 483 129 29.0 1e-29 MKGMKPFNTRFLTLRHALYLGVLLVSNTHAMTLDEALSASLRHESQLEVSRLNVNQSTAM LEQAKQRDGLKVNLVGQLDYERINTPSHVLFPTEGNRKGRSLQLQADYPIYTSGRHRLGI DIAESQLSAQHQGLSDQRSETILNTVMVYTDVLKKKAILELRQKTMANLQRSLYESKRRF DVGMITRADLAQVLAQVAQGQADITQAQSNLTVSEAQFYQVTGITPDNLVPINQLPTIPA NLDEILAQTKNHPALMRAKYEKQAAEKQYALTKRELWPTVMLTSRAGKQDEASYIGSESN NYMVGVQLNVPLYDDGLNRANVKKAQADIDLAAQKIRSLELDLNKRTRTTYAQLQTIRQN KDALANAIEAASIAFVYTRKEFDVGTKTTFDLLNTEQKLLDAQTQKTVNDQDEVVFVYQL LDQMGRLSNLVPMQTAQQVNNE >gi|333032604|gb|GL891822.1| GENE 32 34358 - 35944 1495 528 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01846 NR:ns ## KEGG: ACICU_01846 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 528 1 528 528 1042 100.0 0 MKSNQWLTLGSHLILKKWCDASDRNFQKQFNALETTQRQILHSILQTSTFAKDKKVQNYE QFVKAFPATRYSAWREDIQRYREQKLSLSSSKLVRFQPTSGSSEQIKFIPYTKLFLDELD HAIAPWMASLYRKCLQLSSGTHYWSVSWLPESQREVLKDKNLNDDSALLGIGKRILSKFT QAVPSNVAFAANADDALFATICYLVANRNLAMMSVWSPTFALQLLERLESMQQDVVEVLQ SGKWGSRQASLKEVTAPHSPESAQALIASSNGEQIDFKKLWPKLSLVSSWDTAGSKAWAE KLKEKLPNVQFEGKGLWATEGVVTIPYNDQYPLAYQSHFYEFEYLEGEKQGQIVPSWQLK QGDVVSPLITSGNGLLRYCLDDCLKVTGFLEQIPCFEFQGRRFGVDLVGEKLAPETAQQL LSQLNETESKAISLLAIDTQQQVKPFYCVLFEGEIHHSISNEYIDSILRQNFHYELARNL GQLDQPQIRQANNGWNAYKKLVMFDGIIEGNIKPEPLKKVTLNSLEQL >gi|333032604|gb|GL891822.1| GENE 33 35941 - 36762 550 273 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001683 NR:ns ## KEGG: ABBFA_001683 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 273 1 273 273 532 100.0 1e-150 MINTTYKLISKLNLKNATYGQYFEKEQIDTERLKVMYSIYEQYYENTRFSIFVDDFKNKS GAILIFDSETDEIVGFSTVVVQHFYLNGKDYTVLFSGDTVILKKFWGTRTLQSTMLKLMI KLRIKYPFNELYWLLISKGYKTYLLLANNYYVYYPNIKDENQHLSEVVEHYCEKFFGEYY DKEAGLLNFGDDYQPLKGEVAPITAEMREKNPNIHFFEQKNPTWRAGTELPCIGRLGWKD IARFPVKLMTKPTSKGKFEAQLSHKTKRREAIQ >gi|333032604|gb|GL891822.1| GENE 34 36917 - 38464 1171 515 aa, chain - ## HITS:1 COG:AGl781 KEGG:ns NR:ns ## COG: AGl781 COG0477 # Protein_GI_number: 15890506 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 507 27 514 527 403 42.0 1e-112 MNEHVEAEWRFPAKTAWAIFAAMIFGNFMAILDIQIVASSLNEVQAGMSASRYEVTWVQT VYLIAEIIAIPMSSIVSRVLSTRVYYTMCAIGFTVSSLLCALSWNLESLLVFRGIQGFMG GGMIPTSMTALYLLFPEPKRSLPLVMFGMISTLGPAIGPTIGGWLTNNFSWHWMFLINII PGIIIATVIYSGPNIDRANYSLIKSMDWFSLVGMAMFLGGLEYFLDEGARHDWLADTGVR IAFMVCVVGGMIFFSRSFTQPKPLLDLSVFKNKNFTLSAITTFVIGMALYGLGYMIPVFL GQVREMNSSQIGHVMMVTGIVMFCFAPFLAWLIPNFDTRKTVFVGMILAGFGVWLNSHLS IHSDYDFMFWPQIYRGIGLMICLIVVSHLAMSTLPLSKVADASGIYNLMRNIGGAVGLAL INSSLDWLTAMHVTQINQSMTPQNWIFTERLDQLTAQYQEVGANAQQIALSVIYRDIHFQ ALTSSFNDLLRMLAIIMFVTAFLTIFMDRGKKMNM >gi|333032604|gb|GL891822.1| GENE 35 38489 - 39550 942 353 aa, chain - ## HITS:1 COG:PA3136 KEGG:ns NR:ns ## COG: PA3136 COG1566 # Protein_GI_number: 15598332 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Pseudomonas aeruginosa # 14 352 15 353 355 221 38.0 1e-57 MDNVAQLETDTNFQSRKKITWGVFSVLLLFLVAGILYYFFVYRFYQSTDNAYVQADVTWV MPKISGEVMELLINDNQVVKKGETLAVLDHRDYQARYDQARSVVSLKEAALGVQQQNEKS ARSSIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKA QAAVNAAEAQLGSLQASRAQLLADIQSAHANLNLYQVDLASSKVVSPVSGKIGSLAIQKG SRVSPQTRLMAIIPENSLYVQANFKETQIEKMHIGQKVKLKLDAYPSLNFTGKIESFSPA SGATFSLMPPDNATGNFNKVVQRIPVRIAIDSSPHIDLIKPGMSVSATVDLRT >gi|333032604|gb|GL891822.1| GENE 36 40212 - 40478 187 88 aa, chain - ## HITS:1 COG:AGpT48 KEGG:ns NR:ns ## COG: AGpT48 COG0154 # Protein_GI_number: 16119822 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 81 370 455 467 73 48.0 8e-14 MHALLFPTSPIVAPLANEEVYSIETFQTLMRNTDPGSNIGIPGLSLPIGKGVKSKLPVGL EIDGLAHQDSELLAIGITLEEIFKVLNQ >gi|333032604|gb|GL891822.1| GENE 37 40933 - 41067 89 44 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNYYRFLVDSCFLLRMSEELMKDWVYFYIEHTIKYGKPYRQRRN Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:26:03 2011 Seq name: gi|333032603|gb|GL891823.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld12, whole genome shotgun sequence Length of sequence - 54680 bp Number of predicted genes - 58, with homology - 58 Number of transcription units - 27, operones - 10 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 14 - 73 4.4 1 1 Tu 1 . + CDS 161 - 2149 2831 ## COG0021 Transketolase + Term 2170 - 2200 2.1 2 2 Tu 1 . - CDS 2204 - 2611 467 ## COG1765 Predicted redox protein, regulator of disulfide bond formation - Prom 2631 - 2690 5.0 + Prom 2646 - 2705 7.3 3 3 Tu 1 . + CDS 2826 - 3416 731 ## COG2353 Uncharacterized conserved protein + Term 3437 - 3467 2.0 - Term 3425 - 3453 1.6 4 4 Tu 1 . - CDS 3462 - 4052 396 ## ABAYE2113 hypothetical protein - Prom 4173 - 4232 8.8 + Prom 4159 - 4218 7.2 5 5 Tu 1 . + CDS 4238 - 4984 374 ## COG3698 Predicted periplasmic protein + Term 4989 - 5031 5.1 - Term 4977 - 5019 4.3 6 6 Tu 1 . - CDS 5020 - 5250 196 ## ABBFA_001952 hypothetical protein - Prom 5276 - 5335 5.0 7 7 Op 1 . - CDS 5499 - 6584 934 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 6612 - 6671 3.7 8 7 Op 2 . - CDS 6688 - 7161 185 ## COG2320 Uncharacterized conserved protein - Prom 7191 - 7250 10.7 - Term 7207 - 7254 7.4 9 8 Tu 1 . - CDS 7267 - 11010 4531 ## COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase - Prom 11107 - 11166 2.5 10 9 Tu 1 . + CDS 11144 - 11632 491 ## COG1522 Transcriptional regulators + Term 11633 - 11658 -0.5 - Term 11621 - 11646 -0.5 11 10 Tu 1 . - CDS 11665 - 13155 1658 ## COG0591 Na+/proline symporter 12 11 Tu 1 . - CDS 13563 - 14261 659 ## COG0846 NAD-dependent protein deacetylases, SIR2 family - Prom 14293 - 14352 4.2 - Term 14300 - 14346 10.2 13 12 Op 1 . - CDS 14364 - 14738 580 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 14 12 Op 2 . - CDS 14777 - 15802 1093 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 15842 - 15901 4.3 15 13 Op 1 . - CDS 15911 - 16351 406 ## COG2030 Acyl dehydratase 16 13 Op 2 . - CDS 16351 - 18198 233 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 - Term 18388 - 18439 -0.6 17 14 Op 1 . - CDS 18573 - 19109 665 ## COG3122 Uncharacterized protein conserved in bacteria 18 14 Op 2 . - CDS 19113 - 19793 341 ## ABBFA_001940 hypothetical protein 19 14 Op 3 . - CDS 19799 - 21001 1188 ## COG3633 Na+/serine symporter - Prom 21113 - 21172 7.3 20 15 Tu 1 . - CDS 21425 - 21733 349 ## COG0640 Predicted transcriptional regulators - Prom 21951 - 22010 8.8 - Term 21941 - 21984 2.2 21 16 Tu 1 . - CDS 22207 - 22773 510 ## COG1309 Transcriptional regulator - Prom 22842 - 22901 8.9 22 17 Op 1 . - CDS 23111 - 24274 1178 ## COG2850 Uncharacterized conserved protein 23 17 Op 2 . - CDS 24305 - 24898 402 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 24 17 Op 3 . - CDS 24898 - 25281 354 ## COG3651 Uncharacterized protein conserved in bacteria + Prom 25333 - 25392 5.5 25 18 Tu 1 . + CDS 25420 - 26607 1751 ## COG0126 3-phosphoglycerate kinase + Term 26625 - 26669 6.8 + Prom 26647 - 26706 7.0 26 19 Tu 1 . + CDS 26732 - 26974 404 ## ABAYE2089 hypothetical protein + Term 26997 - 27026 2.1 + Prom 27015 - 27074 5.4 27 20 Tu 1 . + CDS 27096 - 28133 1200 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 28157 - 28196 7.0 - Term 28202 - 28230 -0.1 28 21 Op 1 16/0.000 - CDS 28252 - 29496 1448 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 29 21 Op 2 . - CDS 29562 - 32003 2241 ## COG1452 Organic solvent tolerance protein OstA - Prom 32241 - 32300 5.9 + Prom 31973 - 32032 4.6 30 22 Op 1 6/0.000 + CDS 32124 - 33137 1013 ## COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases 31 22 Op 2 . + CDS 33137 - 33826 718 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) + Prom 33828 - 33887 8.5 32 23 Op 1 15/0.000 + CDS 33914 - 34546 593 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 33 23 Op 2 25/0.000 + CDS 34568 - 35350 919 ## COG1192 ATPases involved in chromosome partitioning 34 23 Op 3 . + CDS 35347 - 36234 1183 ## COG1475 Predicted transcriptional regulators 35 23 Op 4 30/0.000 + CDS 36284 - 36919 610 ## COG0811 Biopolymer transport proteins 36 23 Op 5 1/0.250 + CDS 36935 - 37363 437 ## COG0848 Biopolymer transport protein 37 23 Op 6 9/0.000 + CDS 37360 - 39087 182 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 38 23 Op 7 1/0.250 + CDS 39090 - 40100 755 ## COG1663 Tetraacyldisaccharide-1-P 4'-kinase 39 23 Op 8 . + CDS 40110 - 40871 933 ## COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase 40 23 Op 9 4/0.125 + CDS 40883 - 41863 828 ## COG0470 ATPase involved in DNA replication 41 23 Op 10 4/0.125 + CDS 41875 - 42216 443 ## COG3215 Tfp pilus assembly protein PilZ 42 23 Op 11 . + CDS 42234 - 43007 834 ## COG0084 Mg-dependent DNase 43 23 Op 12 . + CDS 43039 - 43653 507 ## COG1309 Transcriptional regulator 44 23 Op 13 . + CDS 43663 - 44217 417 ## ABAYE2071 general secretion pathway protein G precursor 45 23 Op 14 . + CDS 44207 - 44587 442 ## ACICU_01610 general secretion pathway protein I + Prom 44594 - 44653 2.4 46 24 Op 1 . + CDS 44683 - 45288 494 ## ABAYE2069 general secretion pathway protein J precursor (PilD-dependent protein PddD) 47 24 Op 2 . + CDS 45288 - 46247 818 ## COG3156 Type II secretory pathway, component PulK + Prom 46331 - 46390 4.5 48 25 Op 1 . + CDS 46478 - 47074 483 ## COG0720 6-pyruvoyl-tetrahydropterin synthase 49 25 Op 2 . + CDS 47125 - 47838 649 ## COG0692 Uracil DNA glycosylase 50 25 Op 3 . + CDS 47838 - 48959 1268 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 51 25 Op 4 . + CDS 48966 - 49469 507 ## COG0590 Cytosine/adenosine deaminases 52 25 Op 5 . + CDS 49539 - 49982 514 ## ABBFA_001906 hypothetical protein 53 25 Op 6 21/0.000 + CDS 49990 - 50676 203 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 + Prom 50699 - 50758 4.9 54 25 Op 7 16/0.000 + CDS 50781 - 52454 2787 ## PROTEIN SUPPORTED gi|169633382|ref|YP_001707118.1| 30S ribosomal protein S1 + Term 52467 - 52505 3.1 + Prom 52524 - 52583 4.5 55 25 Op 8 . + CDS 52611 - 52913 382 ## COG0776 Bacterial nucleoid DNA-binding protein 56 25 Op 9 . + CDS 52938 - 53303 459 ## ACICU_01621 hypothetical protein + Term 53309 - 53354 8.5 + Prom 53330 - 53389 4.1 57 26 Tu 1 . + CDS 53469 - 54167 830 ## COG0284 Orotidine-5'-phosphate decarboxylase + Term 54229 - 54274 8.3 - Term 54104 - 54154 -0.8 58 27 Tu 1 . - CDS 54164 - 54670 358 ## COG2431 Predicted membrane protein Predicted protein(s) >gi|333032603|gb|GL891823.1| GENE 1 161 - 2149 2831 662 aa, chain + ## HITS:1 COG:PA0548 KEGG:ns NR:ns ## COG: PA0548 COG0021 # Protein_GI_number: 15595745 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Pseudomonas aeruginosa # 6 660 3 662 665 966 70.0 0 MTTPLNERRIANAIRVLAMDAVQQANSGHPGAPMGMADIADVVWREFLNHNPNNPQWANR DRFVLSNGHGSMLQYALLHLTGYDLSIEDLKQFRQLHSKTPGHPEYGYAPGIETTTGPLG QGIANAVGFALAEKTLAAQFNKDDLKVVDHFTYCFLGDGCLMEGISHEVCSLAGTLQLGK LIAYYDDNGISIDGEVEGWFSDDTEERFKSYGWQVLRVDGHDADAIRQATVEAKAETQKP TIIICKTIIGLGSPNKQGKEDCHGAPLGKDEITLTREALGWTEEAFVIPADVYAAWDAKA KGNEAEAAWNEVFAQYQAKYPTEAAELLRRISGDLPTEFSAQADAFIRETNAKAETVATR KASQNTLQAFGPLLPELLGGSADLAGSNLTLWKGCQGVQENPAGNYVYYGVREFGMTAIA NGVALHGGFIPYVATFLMFMEYARNAVRMSALMKQRVIHVYTHDSIGLGEDGPTHQPIEQ IASLRGTPNLNTWRPADTVETAIAWKSALERKDGPTALIFSRQNLPFQTRTEEQIQNAAK GGYVLAQEKGELKAIIIATGSEVSLAMEAYAQLEGVRVVSMPCAEEFMKQDAAYREAVLP AHIRARVAVEAAHVDYWWKFVGLDGKVIGMTTYGESAPAKDLFQFFGITTEAVVAAVKEL TA >gi|333032603|gb|GL891823.1| GENE 2 2204 - 2611 467 135 aa, chain - ## HITS:1 COG:PA1203 KEGG:ns NR:ns ## COG: PA1203 COG1765 # Protein_GI_number: 15596400 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Pseudomonas aeruginosa # 11 133 12 133 135 105 43.0 2e-23 MVNTAQAQSTSTPYRVTLTDPSGHQWFADEPTDKGGQDTAPNPVQLLLSALGACTTITLE MYANHKGIKIEHVQVDLALNPNGDPEAGQNNIERKITLKGEFTEDQHKRLLKVAENCPIH KLLTSNITIQTELNI >gi|333032603|gb|GL891823.1| GENE 3 2826 - 3416 731 196 aa, chain + ## HITS:1 COG:XF1840 KEGG:ns NR:ns ## COG: XF1840 COG2353 # Protein_GI_number: 15838438 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Xylella fastidiosa 9a5c # 26 196 64 234 237 157 49.0 1e-38 MHLKTLSFGLAVALASTVTLAAPVDYKIDPTHTATVFSWNHFGFSTPSANFSDIQGVIKV DNAKPANSSVNVTIPLSSVNTNVPALDKEFQEEAWFNAAKYPNITFKSTKVETKDKKHFK ITGDLTVKGITKPVVLDAVLNKQGEHPMAKVPAIGFNATTSFNRSDFGLGNYVPNVGDKI TVNITTEATAASAAKK >gi|333032603|gb|GL891823.1| GENE 4 3462 - 4052 396 196 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2113 NR:ns ## KEGG: ABAYE2113 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 196 11 206 206 380 100.0 1e-104 MQQTNKRYPLGAHLIVKHLGYSHHGIYAGRGRVIHYSGLAHFIKKRPIEITSLDAFSHGK KIHVRSYDAPRYRGKVVVRRMRSRMHENHYHLIINNCEHLCSWAITGIESSTQVERMMHR LTTIGYVSSIMSYMNGMMLTVATTCFALVLYIKKKLRDQAKMNIPTYQFLREKAEKRNID PTSPLVFIEPDKKETI >gi|333032603|gb|GL891823.1| GENE 5 4238 - 4984 374 248 aa, chain + ## HITS:1 COG:AGc3235 KEGG:ns NR:ns ## COG: AGc3235 COG3698 # Protein_GI_number: 15889064 # Func_class: S Function unknown # Function: Predicted periplasmic protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 45 242 52 251 254 191 48.0 7e-49 MKILVLCIVNFIIFTQSALALEYRQIRNTTDDQFEVIEISNLEQLRLFLKNPQTDQYYKS FDNIQYQLKACEQLTFAMNGGMFHSGFSPVGLYIENGRESQPLNEDKGWGNFFLQPNGVL AWNDKQAVILTTEQYKAKVFQPDYATQSGPMLVINGKINPLFLANSDSKKIRNGVGVKNN KLYFVISKNRVNFYSFAQFFQKNLEVEQALYLDGSISSLYLHKNNRNDKKFNMGPIIGWV DQADCRHK >gi|333032603|gb|GL891823.1| GENE 6 5020 - 5250 196 76 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001952 NR:ns ## KEGG: ABBFA_001952 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 76 1 76 76 134 100.0 9e-31 MSFWQKLFLADQQHNEHKNQTACVENDCSCKTNEQLLSALAQATDEDVIKGIKKVLISRG YSRKELNELTQKPSIH >gi|333032603|gb|GL891823.1| GENE 7 5499 - 6584 934 361 aa, chain - ## HITS:1 COG:NMA1938 KEGG:ns NR:ns ## COG: NMA1938 COG2265 # Protein_GI_number: 15794821 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Neisseria meningitidis Z2491 # 3 360 2 359 362 443 60.0 1e-124 MTSSYHQQLQAKIDRITTQFSEFTPPTLEVFESPEQHFRMRAEFRIWHTENDMFYAMFER NDDGKQKTVVRIDEFPIADKSINDLMPLLLAELKANSLLSQRLFEVDFLATLSGEMLVTL IYHRKLNQEWEQEAKALAEKLNIKIMGRSRGQKIVIGDDFVVEEFELLNRSFKYKQIESS FTQPNAQVCKKMLQWACDAAEGSKKHLLELYCGNGNFTLPLSLKFERVLATELAKSSVYA AQWNIEQNQIDNIQVARLSAEEFTQAYQGEREFRRLQEADIDIQSYDFDTVFVDPPRAGI DDETLKLLQSFERIIYISCNPNTLYENLKTLTQTHRVTKFALFDQFPYTHHVESGVLLEK I >gi|333032603|gb|GL891823.1| GENE 8 6688 - 7161 185 157 aa, chain - ## HITS:1 COG:VCA0354 KEGG:ns NR:ns ## COG: VCA0354 COG2320 # Protein_GI_number: 15601119 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 1 157 32 188 188 168 53.0 5e-42 MIFFEPEQYQKRCTQLFNLYRKQISALLPSAQIEHIGSSAIPNAFSKGDLDIYIEVLPDQ FEFAIEQLKTLNFIEKQNTLRTNELCMLDSLNNDDVAFQVVVTGSIFTFFLTFRDKLIAS PTLVNEYNQLKLESTHLDHDQYRAVKSNFIERVLSHS >gi|333032603|gb|GL891823.1| GENE 9 7267 - 11010 4531 1247 aa, chain - ## HITS:1 COG:ZputA_2 KEGG:ns NR:ns ## COG: ZputA_2 COG4230 # Protein_GI_number: 15801003 # Func_class: C Energy production and conversion # Function: Delta 1-pyrroline-5-carboxylate dehydrogenase # Organism: Escherichia coli O157:H7 EDL933 # 460 1245 1 794 795 830 56.0 0 MDTFHQMDKSHQGYITEFNDKSEFEQRINTAWRRAEPEAVEELLQAAAVSDDLDHKIYDL AFNLAHNLRERKTSSGKAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDTATRDLLIRD KINQGNWKEHVGQSSLMFVNAAAWGLMLTGKLMETPKQTSLSSVLTGLLARSGRGIIRKA VDVAMRMMGEQFVTGETIEEAVDHAKVLEDKGFRYSYDMLGEAALTDHDAERYFNDYTQA IHAIGKASNGKGVYDGPGISIKLSALHPRYQRAQIERVHKELYGKVFELARLAKQYNIGL NIDAEESERLEISLELLERLCFEPELANWKGIGFVIQAYQKRCFFVVDYIIDLAKRSQKR LMIRLVKGAYWDSEIKKAQIEGMDDYPVFTRKVHTDLSYIACAKKLLAAPEFIYPQFATH NAQTLATIYHLADPSKYYAGQYEFQCLHGMGEPLYEQVVGPREQNKLGVPCRIYAPVGNH ETLLAYLVRRLLENGANTSFVNRIADKTLKVEDLIQSPIYDIRNAAKLEGSVGLKHPSIP LPLDMYGTLRKNSKGYDLANDTPLAALDSTAQELRNRIWQSHPLLANTDSLEQGHSVAIT NPAQNDEIVGYVQEADLKHVEIALTAAEQTQSEWSNTPKDQRAQYLKRAADLMESRIQEL MVLLCRESGKTYANAIAEVREAVDFLRYYATQVENLPANTVIQPLGTVLCISPWNFPLAI FSGQIAAALVSGNCVIAKPAEQTPLIAAQAVQILWEAGIPHGAVQLLPGRGETVGAQLSQ DSRIDGIMFTGSTEVAKILQKTVAKRLSENGQSIPLIAETGGQNAMIVDSSALTEQVVLD VVSSAFDSAGQRCSALRILCVQEDSAATVIKMLKGAMQQLIVGNPAILKTDIGPVIDDEA KQTIDQHIQKMKSKGYPVHQLMFGATSQTELDKGTFVVPTAIELPNLDDLQREVFGPVLH IITYKYGELEQLISRINAKGYGLTMGLHTRIDETIQTVIQHAEVGNLYINRNIVGAVVGV QPFGGEGLSGTGPKAGGPLYMYRLMQHCSNKVLATPFAVKNEQTVFEGFTREVYQSLQNW AKQHLPQANREIEPFGVGKFYELQGPTGESNQYIILPRHRVLSIADTEQDQLHQLLAIFA VGSQAAVMPNSPLLAKHKQTLPKDVLDAITTIKNITTDDFDAVLHHGNREEIFSLQQEIA SRSGAIVGITHVEPNESIPLERLVIERAISVNTAAAGGNASLMTMSE >gi|333032603|gb|GL891823.1| GENE 10 11144 - 11632 491 162 aa, chain + ## HITS:1 COG:SMc00681 KEGG:ns NR:ns ## COG: SMc00681 COG1522 # Protein_GI_number: 15966444 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 8 157 4 153 154 167 50.0 8e-42 MNGPLLSLDRTDLKILDILQTDGRISNSRLAELVNLSPTAVMARVQKLTKDEFILGYEAK LNPVKLNANFLVFVEVLLDKTTPNVLDEFIDAVVHYPEIVECHMVSGGFDFLIKLRSGSM EEFRRIAGQVLWQLPGVKETRSYPVMQVVKDSSKIKIKTKNK >gi|333032603|gb|GL891823.1| GENE 11 11665 - 13155 1658 496 aa, chain - ## HITS:1 COG:PA0783 KEGG:ns NR:ns ## COG: PA0783 COG0591 # Protein_GI_number: 15595980 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Pseudomonas aeruginosa # 1 495 1 495 506 652 71.0 0 MSYFDPTLIMFMVYIVAMVLIGLFAYRATSDFSDYILGGRSLGSFVTALSAGASDMSGWL LMGLPGAIYLSGLSEAWIAIGLIIGAWLNWLLVAGRLRVHTEIQNNALTLPDYFTSRFDD QKKILRIFSAVIILVFFAIYCASGMVAGARLFENLFGMSYTTAIWLSAIATISYVCIGGF LAISWTDTFQAGLMIFALLLTPIVTYLAIGDTTQFVTLIETARPHAFNIISDLSVVAVLS SMAWGLGYFGQPHILVRFMAADSVKSIPAARRIGMTWMILCLVGAVGAGFFGIAYFQQHP ELAGVVSKNPETVFMELTKILFNPWIVGIILAAILAAVMSTLSCQLLVCSSALTEDLYKG FIRKNASQKELVWVGRIMVLAIAVLAIVLAGNPDSKVLGLVAYAWAGFGAAFGPLIILSL FWKRMTLEGALAGMIVGAVVVIGWKNLFASTGVYEIIPGFICAFISIIVVSLISKAPNSD VTGRFEQADKLYKEST >gi|333032603|gb|GL891823.1| GENE 12 13563 - 14261 659 232 aa, chain - ## HITS:1 COG:jhp1180 KEGG:ns NR:ns ## COG: jhp1180 COG0846 # Protein_GI_number: 15612245 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Helicobacter pylori J99 # 1 230 1 224 234 213 45.0 2e-55 MTKLVVFSGAGMSAESGISTFRDSNGLWENYDIQQVATPEAWERNPALVQRFYNERRKNI LEAQPNEAHQYIAKLQDHYDVQVITQNIDDLHERAGSQNVLHLHGNIRLAKSSGPDAQYT TQFYEVNGWKLDLEQDFCLNGYPLRPHVVWFGEAVPAYEEAIRLVQSADIFIVIGSTLSV YPVAALVHEIPHYSKAYYIDPQADHSRVPPQYKLLNMTATEGMHELFNQLTS >gi|333032603|gb|GL891823.1| GENE 13 14364 - 14738 580 124 aa, chain - ## HITS:1 COG:NMA0759 KEGG:ns NR:ns ## COG: NMA0759 COG0509 # Protein_GI_number: 15793734 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Neisseria meningitidis Z2491 # 2 120 4 123 128 134 58.0 3e-32 MNHPSELKYARTHEWVKIEGDLVITGITDHAQDELGDLVYVETPEVGSQVTAGEQAGVVE SVKTASDIHAPVSGTVVEVNTDLEDDPDFVNEDPYGKGWIYKIKPDNIADVEKLLTNAEY EAGL >gi|333032603|gb|GL891823.1| GENE 14 14777 - 15802 1093 341 aa, chain - ## HITS:1 COG:PA5032 KEGG:ns NR:ns ## COG: PA5032 COG2207 # Protein_GI_number: 15600225 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 40 336 40 333 357 154 35.0 3e-37 MKITSARQDQGIPGVYGLLLLDVVSRWGYNDETLFAPFHLTSEQLADPEYRISTPVANEL VKHALNLTGESTLGYHIGTQMRISIHGFIGYAIMTAKDITEAIALAARFIQLRLPFLQLY FSTFGPKATLQLQCDIELEPLRTEIVLGLTIGIMTMAKAITGIEDLAGDVDLDFPEPEGF DKYKSKLSSTIRFNQPHLISSFDKKYLGFKLVNADPIASQIAINQCEAELSALGERRRLA MRVRDILSNSEQHYLSIENVAEYLHMSDRTLKRQLAAEGTSFSTLVDEVRYRHATSLLSR TDYSLEQIADELGYSDVANFSRAFKRWSGRSPSNWRKDPYL >gi|333032603|gb|GL891823.1| GENE 15 15911 - 16351 406 146 aa, chain - ## HITS:1 COG:mll6685 KEGG:ns NR:ns ## COG: mll6685 COG2030 # Protein_GI_number: 13475579 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Mesorhizobium loti # 2 144 4 145 148 149 50.0 2e-36 MLYLEDLKIGDRFISREYEITLDEIKQFASHYDPQPFHTDEELAKEDPIFKGIAASGWHT SAITMRLWTECMPIHGGLVGSESSLRWPRPTRPGDRIHVEAEISAITPSKTKLDRGIVSY VTQALNQHGDVLLISTTKIVVFKKNV >gi|333032603|gb|GL891823.1| GENE 16 16351 - 18198 233 615 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 272 586 195 507 563 94 28 1e-18 MLKWFEKLVDPYPTKGLDEPLPTRFFPFVWQATEGVRPYLLLLIICTAGAASFEALLFSK IGQLVDWLSNSQPESFLSQHASNILILISVLFANILFVNIQSIIKHQILYSTFPMRLRWR FHNLLLKQSLDFFHNDFAGRLSAKVMQTALAVREFWIILGDMLAYVSIYFITVSIVLGAI SPTLLIPLMVWLGLFLLSAWFFIPRLSKVSQQQADARAVMTGRVTDAYTNIQTVKLFAHA GRESQYAKASMKEFMTTVYAQMRLGTLFEVSINLLSAVLFVGVIGTAVWLWTQGLAALGV IAATTAMILKLNSMAEFMMWHMSALFENVGTIQDGMQTLGKKINIQDKPDAKPLAVTQGE IVFKDVTFAYNNKNVIDHFNLHIKAGEKIGIVGRSGAGKSTLIQLLLHFYHLKEGAILID GQNIEDVTQDSLRANIALVTQDTSLLHRSVAENIKYGRPDATDQDMQSAVHKAKAAEFIP QLVDLKGRSGYEAQVGERGVKLSGGQRQRIAIARVFLKDAPILILDEATSALDSEVEAAI QSSLNDLMVDKTVIAIAHRLSTIAQMDRLIVLDEGKIAEQGTHEELIAKNGIYAQLWKRQ TGGFLIEQKVVQGQD >gi|333032603|gb|GL891823.1| GENE 17 18573 - 19109 665 178 aa, chain - ## HITS:1 COG:yaiL KEGG:ns NR:ns ## COG: yaiL COG3122 # Protein_GI_number: 16128339 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 178 40 218 218 94 35.0 1e-19 MVKNALQAQLLKAGLVDNKKAKKLTKQAQHEQRTGQSNEAEIKANIEKAQKEKQAKDQAL NLEKQQQLEEKALKASIIQMIKQHKIVDFAGDVAYQFIDENKIKKVYLSQQVYNALVTGS LVIAKDQDQYAYLPKALAEKIDQKMKGFILINNAEKNEQTTDEEDPYAAYVIPDDLMW >gi|333032603|gb|GL891823.1| GENE 18 19113 - 19793 341 226 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001940 NR:ns ## KEGG: ABBFA_001940 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 218 1 218 226 372 100.0 1e-102 MPFQSLPNWFQLGAFLLAINAGMINVLGLITLLHQSVSHMTGNVSMLAMSLVNWQFEHII YLVLVILCYVCGSFYSGFILGNSHFKLGRRYGLPLSLVSLFIFLCWLLLPYFPKYGLLWA CVAMGLQNAMVSHYKGTIIRTTHLSGVLTDLGLALGYIARGLKVENRRIILHLLIFIGFL SGGIIAALVHPYLKLQSFLLPAILSLTLSISYWAVYFHSSSSSNSD >gi|333032603|gb|GL891823.1| GENE 19 19799 - 21001 1188 400 aa, chain - ## HITS:1 COG:PA2042 KEGG:ns NR:ns ## COG: PA2042 COG3633 # Protein_GI_number: 15597238 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Pseudomonas aeruginosa # 1 391 8 397 409 400 63.0 1e-111 MLEFFSRLSLVTKIIIAIILGIGVALLFPTVTPYLSLFGELFIKALKSVAPILVFVLVLS SIANFQVGHSANLRPVLLLYVVGMLLAAFSAVIASLSFPSTLYLNTVSHNNLQAPGSLAD ILKNLLLSFIANPVQAISEANFIGILAWAIGLGLAMRHSSDTTKQVMQDVSHAVSAIIHK VIAFAPVGIFGLVAVTFADAGLATLESYAQLLAVLLGTMLFVALVINPILVGLTIRGNPY PLVFKCLKESGITAFFTRSSAANIPVNLDLAERLGVNPSTASVSIPLGATVNMAGAAVTI TVLTLATVHTLGIHVDLATMIILSIVATISACGASGVAGGSLLLIPVACSLFGISSEIAM QVVAVGMIISVLQDSTETALNSSTDVLFTAAVDIRSRQNS >gi|333032603|gb|GL891823.1| GENE 20 21425 - 21733 349 102 aa, chain - ## HITS:1 COG:SMa1056 KEGG:ns NR:ns ## COG: SMa1056 COG0640 # Protein_GI_number: 16263024 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 1 102 11 112 115 87 43.0 5e-18 MKDGLQIEEMKNAADSVVGTLKSLANTDRLLILCHLAHEELNVSQIEEKTQITQPTLSQQ LMMLRKSDVVSTRRDGKQIFYSIKDDKMHSILNMLYQLYCIE >gi|333032603|gb|GL891823.1| GENE 21 22207 - 22773 510 188 aa, chain - ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 163 9 168 193 96 35.0 2e-20 MSKKDDIITTALRLFNSYSYNSIGVDRIISESGVAKMTFYKYFPSKEKLIEECLLLRNSL LQNSLTAAISKEDETNPLARIKAIFLWYSDWFNSEDFNGCMFQKALEEVLKQYPSTHQPA TLYKIWLTQLMQDLLIQYEIEESRPLALLLVNILEGMTIQAQVEHGSVKIDDYWKRVEKL IEFEKIAH >gi|333032603|gb|GL891823.1| GENE 22 23111 - 24274 1178 387 aa, chain - ## HITS:1 COG:HI0396 KEGG:ns NR:ns ## COG: HI0396 COG2850 # Protein_GI_number: 16272345 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Haemophilus influenzae # 11 379 15 392 404 316 46.0 4e-86 MTEALTVLGGITAEQFLTEYWQKKPLLVRNAMPEIVGMLEPNDVKELALEDHVTARLIRQ KDKNPNEWHVKSSPLTKGDFQKLPKLWTLLVQAVDHYSFDIAELWKKFPFIPQWRRDDIM VSYAPKGGSVGKHFDFYDVFLVQGYGHRRWQLGQMCDANTEFVPNQPLKLLSEIDVHFDE VLAPGDLLYVPPGLSHYGVAEDDCLTFSFGFRMPNISGMIDRISDQFATDELLQNPVVDI TRKNPPQIGEINTEELAYLRDLVLAQLKNSTVLDAALMSYMSEPKYPDNIPEPDEIEVED LNAILSEGYELLLEPASRLLYTEQNGILKFWGNGEELPIVESFATQLKSIADGKSIPFNS ELNNTDILENIVQLLNNSILMLLPPAE >gi|333032603|gb|GL891823.1| GENE 23 24305 - 24898 402 197 aa, chain - ## HITS:1 COG:ZyceF KEGG:ns NR:ns ## COG: ZyceF COG0424 # Protein_GI_number: 15801204 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Escherichia coli O157:H7 EDL933 # 4 191 15 199 207 156 45.0 3e-38 MKQPKIILASSSQTRKDLMNRLGIEYICISPDIDESPCGETHADDLAKRLAFTKAQVIAQ KNREAIVIGSDQVAWREHAPHDFIGKPLTIENAKAQLAANSGRIVFFSTALSVQCLEKSF EHTLVEHYQVKFRNLSAPEIERYVDLDLPLECAGSFKCESLGISLFEKMIGQDQTTLMGL PMIQLCQILRQLNLQIP >gi|333032603|gb|GL891823.1| GENE 24 24898 - 25281 354 127 aa, chain - ## HITS:1 COG:CC3660 KEGG:ns NR:ns ## COG: CC3660 COG3651 # Protein_GI_number: 16127890 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 10 126 54 170 172 140 56.0 4e-34 MSIHPDPQINRLNVLGEPLASCCFDPITGYFRNGFCHTAVTDLGQHTVCAQMTSEFLNFS QKVGNDLITPLPEAGFPGLQPGDFWCICVTRWVEAYQAGQAPPVKLHACHQAVLSYVPLD VLMEFAV >gi|333032603|gb|GL891823.1| GENE 25 25420 - 26607 1751 395 aa, chain + ## HITS:1 COG:PA0552 KEGG:ns NR:ns ## COG: PA0552 COG0126 # Protein_GI_number: 15595749 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Pseudomonas aeruginosa # 1 395 1 385 387 517 74.0 1e-146 MNFQRMTDLNLAGKRVLIREDLNVPVKNGVITSDARLRAALPTIKAALEKGAAVMVFSHL GRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLNGVEVEAGQVVLLENVRFNPGEKK NNPELAQKYAALCDVFVMDAFGTAHRAEASTEGVARFAPVAAAGPLLAAELDALGRAMQT PEKPMVAIVAGSKVSTKLDVLNSLSGICDQLIVGGGIANTFLAAAGYNVGKSLYEADLVE TAKQIAAKVSVPLPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPET AKAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQSDAFSIAGGGDTLAAIDKY NVADQIGYISTGGGAFLEFVEGKTLPAVAVLLERA >gi|333032603|gb|GL891823.1| GENE 26 26732 - 26974 404 80 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2089 NR:ns ## KEGG: ABAYE2089 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 80 6 85 85 104 98.0 1e-21 MNLKLTFAALLIVPMMLTACAKKEEAAQAGQDAASTAVADKVTPEQQAAIDALDKPVLDE KNTDVVEGSASSETAASETH >gi|333032603|gb|GL891823.1| GENE 27 27096 - 28133 1200 345 aa, chain + ## HITS:1 COG:PA0555 KEGG:ns NR:ns ## COG: PA0555 COG0191 # Protein_GI_number: 15595752 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Pseudomonas aeruginosa # 1 344 1 344 354 593 83.0 1e-169 MALISMRQLLDHAAEHNYGVPAFNVNNLEQMRAIMLAADATNSPVIVQASAGARKYAGAP FLRHLILAAIEEWPHIPVVMHQDHGTSPDVCQRSIQLGFSSVMMDGSLGADGKTPTTYDY NVDVTRQVVAMAHACGVSVEGEIGCLGSLETGMAGEEDGVGAEGVLDHSQLLTSVEEAKQ FVADTNVDALAIAVGTSHGAYKFTRPPTGDILAIDRIKEIHAALPNTHLVMHGSSSVPQE WLKVINEFGGNIGETYGVPVEQLVEAIKHGVRKINIDTDLRLASTGAIRRFMAENPAEFD PRKYFAKTVDSMKQICIDRYEAFGTAGNADKIRPISLEKMVDRYK >gi|333032603|gb|GL891823.1| GENE 28 28252 - 29496 1448 414 aa, chain - ## HITS:1 COG:PA0594 KEGG:ns NR:ns ## COG: PA0594 COG0760 # Protein_GI_number: 15595791 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Pseudomonas aeruginosa # 2 403 24 429 430 241 36.0 2e-63 MHSFAQPTDEVVAIVDNSVILKSDLEQGMAEAAHELQAQKKEVPPQQYLQFQVLDQLILR QAQLEQVKKYGIKPDEKSLNEAVLKVASQSGSKSLEAFQQKLDAIAPGTYENLRSRIAED LAINRLRQQQVMSRIKISDQDVDNFLKSPQGQAALGNQAHVIHMRISGDNPQEVQNVAKE VRSQLAQSNDLNALKKLSTATVKVEGADMGFRPLSDIPAELAARITPLQDGQTTDLISVR DGVHVLKLLERKQNEQKALVPQYQTRHILIQPSEVVSPENAKQIIDSIYKRLKAGEDFAI LAATYSNDTGSARDGGSLGWVTPGMMVPEFDKKMQEIPVGEISEPFQTQFGWHILQVTDK REKDMTHEYQERMARQILGERQFNTEIDSWLREVRANAYVEIKDPSLDKKNLQK >gi|333032603|gb|GL891823.1| GENE 29 29562 - 32003 2241 813 aa, chain - ## HITS:1 COG:PA0595 KEGG:ns NR:ns ## COG: PA0595 COG1452 # Protein_GI_number: 15595792 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Organic solvent tolerance protein OstA # Organism: Pseudomonas aeruginosa # 80 805 133 918 924 335 30.0 2e-91 MKHQFKFNPLATAIFTLLCSGSIQSSYAESAGVVSNIDNNQLKASIKEAYPGQEFFQQYY VDKSTPEAQLRNNKYLSSAFCQGTWITPINPETKALDADKATSVVTADYGHYNPAGDSVL EGNVVIDQEGRTVRADKVTIDKTQTFAHAQGRVQLAQGGLLSQSDEIDYNLKTQTGNLDN SFYISEQQHAHGHAGKIERTSPNVMVLNDATYTTCPPGQKPGWKIQANKIELNQETGRGV TRGTKLYVKDVPVLAVPYFNFPIDDRRTTGILNPQFGFSNDGGIELSVPVYLNLAPNYDA TITPRYLADRGAMLQGEFRYLTDGFGAGQIWGGILPSDKEYDDKDRKDFHFLHNWDINDQ WSTNLEYNYASDKDYFSDLDSSPISKTDLNLRRAWELNYQHGIPGLKAQLKVEDFQTLDP EVKDVNKPYARLPQFLLNYVTGNPLGLQYEFNNDTAYFKKSINDDSAQESSGTRIYNQFA TRYNYRTPAAFVIPELSVRSIQTFYDKDSIASQGLDGGSENKSVVVPQFTLDTGLNFERE GKYLQTLTPRAFYAYAPYKNQDGYPNFDSTTASISYDQLFNPYRFYGHDRLEDNNFLSLG VSYSLFDTVGLERLRASVGQSYYFEDRRVTLKQQDEIDTERNTGPVVSLSSQLNQNFTIA ANSAWMSNGDNAQRDFQLYYTGDKGNLYNLGYFYRKDIPGRQDTYDQVVASFIQPIKDNW RIMGHVQYDMDNDVARELLLGVNYESCCWGISVYGRSYYNDLDDPKSPDVSEKRAIMAEI TLKGLGGLNNKLASLLENRVLGFNKINQSWTQR >gi|333032603|gb|GL891823.1| GENE 30 32124 - 33137 1013 337 aa, chain + ## HITS:1 COG:PA0596 KEGG:ns NR:ns ## COG: PA0596 COG3178 # Protein_GI_number: 15595793 # Func_class: R General function prediction only # Function: Predicted phosphotransferase related to Ser/Thr protein kinases # Organism: Pseudomonas aeruginosa # 5 301 6 312 338 213 39.0 5e-55 MNTQREQLIHTWLTSVLENDQFQIAYLAGDASFRRYARIQLQNKTYMLMDAPPEKEDCVP FVTIDEFFAGHGVRVPQIVAKDLNQGFLLLEDFGDVLLSTLLNDETVDQYYEQSFKQLIH LQSINGAEHFPAYSYEKLLSEMQLLTDWMLPSLDIHPTAEQKKTIDDAFDFLAQAALAQP QVIVHRDFHSRNLMKIANEEELGVIDFQDAVIGADTYDLISITRDAYVQWNAERVYQWFK VFYELLPASAKQNRSFDQFKRDADLMAIQRHIKILGIFVRLFERDGKSGYLKDLPRVMWY LLEESRGYHELDDFMAFIHSSVMPKFIEKYGPYEVAA >gi|333032603|gb|GL891823.1| GENE 31 33137 - 33826 718 229 aa, chain + ## HITS:1 COG:PA0597 KEGG:ns NR:ns ## COG: PA0597 COG1208 # Protein_GI_number: 15595794 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Pseudomonas aeruginosa # 1 225 1 222 224 223 53.0 3e-58 MKAMILAAGLGNRMRPLTLYTPKPLLEVGGKPLIVWHIEKLKKIGVTDIVINSAWLADKL ISSLGDGSQFGVDIRWTREEEGLETAGGIINALPLLGTDPFILVNGDVWTTMDFEALRHI KLNDDLAHLVLVDNPKQHPDGDFTLLNGRAFTFDQDVKGENLTFSGVSVIHPKLFDGLEA GKRPLAPLLKQAMHNQKISGEKLKGAWVDVGTPERLMELDLQIREGFYD >gi|333032603|gb|GL891823.1| GENE 32 33914 - 34546 593 210 aa, chain + ## HITS:1 COG:PA5564 KEGG:ns NR:ns ## COG: PA5564 COG0357 # Protein_GI_number: 15600757 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Pseudomonas aeruginosa # 7 209 11 212 214 164 47.0 1e-40 MHPFFQELQQGSQKLGLSLSDEALTLLLKYQDALVLWNKAYNLTAIRDPKEMLVKHLLDS LSILKDLPAGRLLDVGTGGGMPGMIIALCQPERSCVLLDSNGKKIRFLKQFIADLKLKNV IAVQTRVENQDTIDELGQFDVITSRAFASLTDFVEAARPYLHEQSIIAAMKGLIPVEEME ELKQEFSCKVIELHVPRLDEQRHLLLLQRI >gi|333032603|gb|GL891823.1| GENE 33 34568 - 35350 919 260 aa, chain + ## HITS:1 COG:PA5563 KEGG:ns NR:ns ## COG: PA5563 COG1192 # Protein_GI_number: 15600756 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Pseudomonas aeruginosa # 1 255 1 256 262 303 59.0 3e-82 MAQIIAIANQKGGVGKTTTAVNLAASLAVLKKRVLLVDIDSQGNATMGSGIQKNDLLYSI TDVLLGEVPIETAIQKAEVGYKVLGSNRELSGVELAIAEQEGREFILKNALNEIRDSFDY IIVDCAPSLSLITVNALAAVDGVIIPMQCEYYALEGLADLTQTIDRIQKALNPDLEIIGV LRTMYDARNALTRDVSAELEQYFGKKLYDTVIPRNVRLAEAPAHGLPVIYFEKSSKGAVA YLNLAAEMLKKSKVKKGSKV >gi|333032603|gb|GL891823.1| GENE 34 35347 - 36234 1183 295 aa, chain + ## HITS:1 COG:PA5562 KEGG:ns NR:ns ## COG: PA5562 COG1475 # Protein_GI_number: 15600755 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 289 1 286 290 271 56.0 9e-73 MSIKKRGLAKGRGLDALLGSIQKEKLQLEAQALDHGQLKQIDVKLLKRGEYQPRRFIHEH DLQELASSIEKHGVMQPIVIRPVDDEAHPYEIIAGERRWRAAQIAGLTEIPAIVRDLNDQ VAIALALIENIQRQDLNPIDQALALQRFHDEFGLSHQEIADTVGKARTTVSNLLRLLSLA DDIKEFMQQGQLDMGHARAILTLKGKEQLEVAKIVIEKGLSVRQTEQLVRDWSEPKQEKE KAPVAPDIEQLTQKLSERFGANVKIDHNQKGKGKLVIHYHSLDELDGILNICLPD >gi|333032603|gb|GL891823.1| GENE 35 36284 - 36919 610 211 aa, chain + ## HITS:1 COG:PA2983 KEGG:ns NR:ns ## COG: PA2983 COG0811 # Protein_GI_number: 15598179 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Pseudomonas aeruginosa # 1 189 1 190 211 142 45.0 5e-34 MWELVKAGGWLMLPLILCSILTVAISIERFVRLRRSQVLPKVLMNDGSADISVVITNLEQ DTNAQSTALGNILKAGFEHQEHGEQFARAQMEAMASQEISYLEKNINFLGTLSAIAPLLG LLGTVVGIIESFLVIDFGSAGSPSLMIPGISKALITTAVGMLIAIPALISYRYFQRVVQD YIAELEQQSTLFHASLFYKRSSVMQEHRRVG >gi|333032603|gb|GL891823.1| GENE 36 36935 - 37363 437 142 aa, chain + ## HITS:1 COG:PA2982 KEGG:ns NR:ns ## COG: PA2982 COG0848 # Protein_GI_number: 15598178 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Pseudomonas aeruginosa # 9 133 13 138 146 108 42.0 4e-24 MKFKRSQVEDIHINLTPMIDCLLFILVFLLLSTTFNQPSRINLTLPDAQGVPPKQYDHKI EVVVDSSGHYAVNGQALSTKDVADLSTAIKQIAQERRDFMFIIAADAKASHQDVIRVMDV AGQLGFVNINISTKVPSRGFSE >gi|333032603|gb|GL891823.1| GENE 37 37360 - 39087 182 575 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 331 558 1 224 305 74 26 1e-12 MNQDFKVYLRLISYLKPYWGVALLVLIGFGMNSATEVSVAKLIKFIIDAIQSASRADLDW FPLLIILLVFFRGLGLFMGGYYTAVISRSLVFSIRQEVYAKLLRLPAQYYLDNSSGHITA KIMYNVEQLTAASSESLKTIVRDGMITLGLLGYLFYTNWRLTICIMVFLPVIGILVRKAS KRMRKLSMQVQDTMGDVNHVVQESINGNAVVKSFAGEESEQERFYKSSEENLKRGLKMVI VQNLNSPVVQVVMACAMALIVWLALRPQILGNTTAGEFVAYITAAGLLSKPVKNLTDVNE KLQRGLAAAHSVFELLDLPEEQNSGELKPQLQGAIRFDHVVLNYADGTQAIKDFSLDIRP GETVALVGRSGAGKTSLVNMLVRFQEVSSGQIYLDDLPIRDIELSSLRTQIAMVNQQVVL FNRTVRENIAYGQLHNASDEDVIAAAKAAYAHDFIMNLPNGYDTVLGAQGLNLSGGQRQR IAIARAILKNAPILILDEATSALDNESEHFIQQAFDEAMQDRTTIVIAHRLSTIENADRI VVMDRGQIVEQGTHQELLAKHGAYYQLHQRNFEDH >gi|333032603|gb|GL891823.1| GENE 38 39090 - 40100 755 336 aa, chain + ## HITS:1 COG:PA2981 KEGG:ns NR:ns ## COG: PA2981 COG1663 # Protein_GI_number: 15598177 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Tetraacyldisaccharide-1-P 4'-kinase # Organism: Pseudomonas aeruginosa # 1 292 1 296 332 234 42.0 2e-61 MSLAQLIQNAWNKQSSWLIVLRPLSCLYRAGFLLNRYLYSSGFKKVYTAPVPVMVIGNIT VGGSGKTPLLIELVNYLKQHNVKVGVISRGYGGAGPFPMLVTSASQAAEAGDEPALIVQS TGVPMAVGPNRQVAIELLLASTKLDLIISDDGLQHWALGRQIEWIVLDQNRGLGNRKLLP EGYLREPAERLKTSTVIEHIFTPTTTLHMHLDAGQPYLLNPSSATELSFNIQNNYHAVVG IGFPQRFYQTLKGLGVKQFQEHAFRDHHDYSIDDLIFNDDLPIITTEKDAVKFLPLLEKH PDFKRSIWVVPVKAVLSTECYQILNQQLQKLDIQIS >gi|333032603|gb|GL891823.1| GENE 39 40110 - 40871 933 253 aa, chain + ## HITS:1 COG:STM0988 KEGG:ns NR:ns ## COG: STM0988 COG1212 # Protein_GI_number: 16764348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-2-keto-3-deoxyoctulosonic acid synthetase # Organism: Salmonella typhimurium LT2 # 4 244 5 243 248 219 48.0 3e-57 MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRA EGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKP NCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAF RHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQAD LDRLNNMPVESFE >gi|333032603|gb|GL891823.1| GENE 40 40883 - 41863 828 326 aa, chain + ## HITS:1 COG:PA2961 KEGG:ns NR:ns ## COG: PA2961 COG0470 # Protein_GI_number: 15598157 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Pseudomonas aeruginosa # 7 234 2 226 328 136 36.0 5e-32 MNQNVTSKVYPWQQTMWETLTTRFPNIGHGLLFYGKQGCGKHAFAKHFLAWVLCLNKQPQ GACGECSSCQWLKSDTHPNYVHITTDEENKKQNAKIKIEKIRDLLPFVQQTGEGWRVVVI EPAEALNLASSNALLKTLEEPGERVVLILLADHYLKLPATIRSRLQHFALDRISYTEATS YLNEHLAEIASVPPELLLGLSNDMPLQAVEIATSDWFAKRQSFLEDWTKVVNQKNMPLFY SAKWQKELNFSDFMMLLEYLLGDLICVKLNQPQKNIDLQFHQLAQNYNLESLFSLYEELQ QSKRLVEQNVQTQLIIDQLFIKLMNV >gi|333032603|gb|GL891823.1| GENE 41 41875 - 42216 443 113 aa, chain + ## HITS:1 COG:PA2960 KEGG:ns NR:ns ## COG: PA2960 COG3215 # Protein_GI_number: 15598156 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilZ # Organism: Pseudomonas aeruginosa # 1 113 3 118 118 87 38.0 4e-18 MQPQMGGIIQVNIPDRATLQASYMGYVQGGGLFVPSKQKVKMGQEIFILATLPEQSQKIP LTGKVVWISHKQSGFKPQGFAIQLSGDKGIYYKAEAERILAGSMSLDRPSYTM >gi|333032603|gb|GL891823.1| GENE 42 42234 - 43007 834 257 aa, chain + ## HITS:1 COG:RSc1787 KEGG:ns NR:ns ## COG: RSc1787 COG0084 # Protein_GI_number: 17546506 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Ralstonia solanacearum # 1 257 1 265 267 239 48.0 4e-63 MFVDTHCHLTMLDLTPYNGDLDLALAAARAEGVSKFMAISVDLDDHIALAEIAKRHEDVG YTVGVHPCEDVDTMARATTEYLTELAQSEKVWALGETGLDYYHSTDFINEQKDCFARHIQ ASKNVKKPVVVHTRSAKHDTVDIIRAEQSTHGILHCFTEDWETAKAVLDCGYYISFSGIV SFKNAQDLRDVAKQVPLDRLLIETDSPYLAPVPYRGKTNEPKYVPYVAKALSEVYDKPVE EIARITSQNFENLLKAI >gi|333032603|gb|GL891823.1| GENE 43 43039 - 43653 507 204 aa, chain + ## HITS:1 COG:PA2957 KEGG:ns NR:ns ## COG: PA2957 COG1309 # Protein_GI_number: 15598153 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 182 10 186 212 83 32.0 2e-16 MKMDRQAQFRAREALIFQVAEQLLLENGEAGMTLDVLAAELDLAKGTLYKHFQSKDELYM LLIIRNERMLLEMVQDTEKAFPEHLAFFMLHHLHHPERTVLFHQIEEKLSITAQGVHHLF NELYQVRKQRLRIIIRMTDHYLESIQSHMTTRDYLASIWSLTHGAAAILNSSFYQRYLGS RDTLRVAYIDQALALPKQAVEQYA >gi|333032603|gb|GL891823.1| GENE 44 43663 - 44217 417 184 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2071 NR:ns ## KEGG: ABAYE2071 # Name: not_defined # Def: general secretion pathway protein G precursor # Organism: A.baumannii_AYE # Pathway: Bacterial secretion system [PATH:aby03070] # 1 184 1 184 184 343 100.0 1e-93 MKSNLPFQSQKGFTLIEVMVVIVIMTIMTSLVVLNIGGVDQKKAMQARELFLLDLQKINK ESLDQSRVLALETHGETDVSPFSYELYEYHDQSTLQVQDIKNRWQKYTEFKTRQLPAHVS FSVQPLDDQNYSKAKNTDLIGGQTPQLIWFGNGEAKTVKIQFYLEQKPIGSEIQIDHLGK INEI >gi|333032603|gb|GL891823.1| GENE 45 44207 - 44587 442 126 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01610 NR:ns ## KEGG: ACICU_01610 # Name: not_defined # Def: general secretion pathway protein I # Organism: A.baumannii_ACICU # Pathway: Bacterial secretion system [PATH:abc03070] # 1 126 1 126 126 208 100.0 7e-53 MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQ EWLQGTQSKQVTSQGETWQIDKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFN YPVKAK >gi|333032603|gb|GL891823.1| GENE 46 44683 - 45288 494 201 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2069 NR:ns ## KEGG: ABAYE2069 # Name: xcpW # Def: general secretion pathway protein J precursor (PilD-dependent protein PddD) # Organism: A.baumannii_AYE # Pathway: Bacterial secretion system [PATH:aby03070] # 1 201 33 233 233 384 99.0 1e-106 MVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLS ANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNT SNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGV NYEWIYSLNQGDLSLSQEGNS >gi|333032603|gb|GL891823.1| GENE 47 45288 - 46247 818 319 aa, chain + ## HITS:1 COG:PA3097 KEGG:ns NR:ns ## COG: PA3097 COG3156 # Protein_GI_number: 15598293 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulK # Organism: Pseudomonas aeruginosa # 6 316 3 314 333 134 34.0 3e-31 MAVSYKHQQGVALLTILIMVALATILAASIAKHQNNTMENTAYLMRQNQSLLYAKSAEAF FSELLIQDANNAGGVDHLKETWAQPMPPFSIEEGSVSGRLLDESGKFNLNNLTNGEGIVN EDAKSWFERLLVRVGLPAELSQAVIDWQDPNDEPTGPMGAESSYYEGLDPGYMAANTKFH RIEELKLVRGFDGKKFDLIAPYISALPENSKLNINTASPLVLASMDEKLDIGAIEKELQT RQQNLKFFQNVDELWQLNAFSAVDSQRKNQVNSLIDVKSSFFQAQIEVVLNNRKRQFTSA LMRKDKQVYVYSRSMAPFN >gi|333032603|gb|GL891823.1| GENE 48 46478 - 47074 483 198 aa, chain + ## HITS:1 COG:Cj0159c KEGG:ns NR:ns ## COG: Cj0159c COG0720 # Protein_GI_number: 15791547 # Func_class: H Coenzyme transport and metabolism # Function: 6-pyruvoyl-tetrahydropterin synthase # Organism: Campylobacter jejuni # 1 190 1 190 193 209 54.0 2e-54 MLIRKLFKFENAHVVRNCTSDRCKRSIHGHSYKVELLLKASKLDHGQMVYDFGLLKGVIK DLFDSFDHAICFWEKDDPQYIDACKTFSARWISLPVSPSAEQFSRIFFYLAQQVLQSTVT QNGEGDVEVYSVIVHETDTGYAQSFLEDIQNEQMGLLNLEGIIFSEQVQSEWADPDMYEN LKQGIKFHNPHVNLQVEV >gi|333032603|gb|GL891823.1| GENE 49 47125 - 47838 649 237 aa, chain + ## HITS:1 COG:SMc03195 KEGG:ns NR:ns ## COG: SMc03195 COG0692 # Protein_GI_number: 15966679 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Sinorhizobium meliloti # 12 235 3 225 241 269 58.0 3e-72 MQLTEQQQDKLSKVQLEESWKRSLTPFLLSPYMDSLRDFLFQQKQAQKTIYPPSKQIFNA LNITPLDHVKVVILGQDPYHGPNQANGLSFSVQRGVALPPSLRNIFHELHTDLGVPVSRH GDLTKWAEQGVLLLNSVLTVEAGQPTSHQKQGWEEFTDAVIDVLNEQREHIVFILWGAYA QRKGQRINREKHLVLTAAHPSPLAANRGGFFGCKVFSKTNQYLKQHGIEPIDWQLDA >gi|333032603|gb|GL891823.1| GENE 50 47838 - 48959 1268 373 aa, chain + ## HITS:1 COG:PA0744 KEGG:ns NR:ns ## COG: PA0744 COG1024 # Protein_GI_number: 15595941 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Pseudomonas aeruginosa # 24 338 18 337 367 177 40.0 2e-44 MNSPNVNSYHPDLVVEEAKNGWRIVRLNRPKSLHALDESIVTALLRVFEDFRDDEQVKAI WLDSTTPKAFCAGGDVRKLRQLVINQEVETANKFFQQEYALDLLLHNYAKPVVVWGEGYV MGGGLGLFMAAPFRLVTPYSRLAMPEINIGLYPDVGASRFLADRGQIGLFTGLTGSIMTA AGAYSIGWATHICEAQRDNVLQKVLNINWAHYPAGDFRAIDDTLNSLHRPVAAGPLQNSL DVIHSVCRGSSFEQDYQAIVSLRDASSDWLRQASENLQKGSPSTAAITWLLWQWGKQVHS WDEVFDLEAQISEWKIRHPDFVEGVRARLVDKDLSPEWKACEDLTLRGILADDPPITTID SWNALLRQYGVVS >gi|333032603|gb|GL891823.1| GENE 51 48966 - 49469 507 167 aa, chain + ## HITS:1 COG:ECs3425 KEGG:ns NR:ns ## COG: ECs3425 COG0590 # Protein_GI_number: 15832679 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Escherichia coli O157:H7 # 3 166 16 178 178 160 48.0 8e-40 MSKFSDEYWMQLAYEQAELAAKQGEIPVGAVIVSQNKLIGAGFNAPIGLSDPTAHAEIQA IRAACESLKNYRLPEDATLYVTLEPCTMCVGALVHARIKHVVFGTTEPKAGSLVSARQLL ENGYYNHKFTFEHGYLHEKCAQQLSLFFKQRREQKKQEKQQKTSLND >gi|333032603|gb|GL891823.1| GENE 52 49539 - 49982 514 147 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001906 NR:ns ## KEGG: ABBFA_001906 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 147 1 147 147 278 100.0 7e-74 MRNVITIQKEFNAPLSDVFNLLSKHAAYNTAFAPLQVVRVKDSADPERPDGVGSVRRMGF GVIKPLKEEITHLEENKRIEYKLIDNPLVKHHLGRIEFSEITPYITLVTYRIELTAKAPV VSKLILAQLKLAITLGFSRLAKAFASS >gi|333032603|gb|GL891823.1| GENE 53 49990 - 50676 203 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 1 213 32 275 863 82 27 4e-15 MTVQIITIDGPSGSGKGTLAAKLAAYYQFHLLDSGALYRLLGLSLHKHDLLEKLDSHLDE CVNYARQLNIKFETSAEGTLVFLDGEDVTQTIRTERVGEYASKVAAIPELRQALFERQRA FAQTPGLVADGRDMATSIFPEANAKIYLTASAESRAERRVKQLQGMGLDAKINDILANIQ ARDKRDMEREVAPLKPAADAYIIDSSELTIDQVFKLMVDYVNSRTVSN >gi|333032603|gb|GL891823.1| GENE 54 50781 - 52454 2787 557 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169633382|ref|YP_001707118.1| 30S ribosomal protein S1 [Acinetobacter baumannii SDF] # 1 557 1 557 557 1078 100 0.0 MTESFAALFEESELNLNVEKGAVIQGVVVNIDSDWVTVDTGLKSEGIVDRAEFLNEQREL EVQVGDTVDVVVEALDNGMGQTVLSREKAKRAETWTKLEKIFEDGEIVTGVISGKVKGGF TVDIGPVRAFLPGSLVDTRPIRDTTHLEGKELEFKVIKLDAKRNNVVVSRRAVMEAESSA DREALLAQLEEGQTVTGTIKNLTDYGAFVDLGGIDGLLHITDMAWKRIKHPSEVVEVGQE VTVKVLKFDRERNRVSLGLKQLGEDPWLAIMSRYPKGSIVKARVTNLTDYGCFAEIAEGV EGLVHVSEMDHTNKNIHPSKVVQIGDEVDVMVLEVDEERRRISLGIKQTRANPWEEFAKS HEKGEKVSGTIKSITDFGIFIGLNGGIDGLVHLSDISWNEQGEEAIRRYKKGDTVEAVIL SVDAEGNRISLGIKQLNSDPFNDFLAANERGALVKGTVTAVDARGATVKLADEVEATLKA SEINRDRVEDATKFLEVGQEVEAKIINVDRKSRSINLSIKAKDEAEEKEAVANLRTASAS QDNGPKTIGDLIKAQMK >gi|333032603|gb|GL891823.1| GENE 55 52611 - 52913 382 100 aa, chain + ## HITS:1 COG:PA3161 KEGG:ns NR:ns ## COG: PA3161 COG0776 # Protein_GI_number: 15598357 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Pseudomonas aeruginosa # 6 97 1 92 94 110 61.0 6e-25 MTTEALNKSDLIERIALKNPHLAEPLVEEAVKIMIDQMIEALSSDNRIEIRGFGSFALHH REPRVGRNPKTGKSVDVAAKAVPHFKPGKALRDAVNESGK >gi|333032603|gb|GL891823.1| GENE 56 52938 - 53303 459 121 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01621 NR:ns ## KEGG: ACICU_01621 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 121 3 123 123 172 100.0 3e-42 MRYILIALLIIVFGYSLALVLQNPTELPVDLLFTQVPAMRLGLLLLLTLALGIVVGLLLG VQVFRVFQKSWEIKRLRKDIDHLRKEQIQSAQLAAAEAAANVRHEKTVVDIYPQDKNSTP L >gi|333032603|gb|GL891823.1| GENE 57 53469 - 54167 830 232 aa, chain + ## HITS:1 COG:HI1224 KEGG:ns NR:ns ## COG: HI1224 COG0284 # Protein_GI_number: 16273143 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Haemophilus influenzae # 8 232 5 230 230 259 59.0 3e-69 MEESLLSIIVALDAKSQYDALKIVEQLDPTLCRVKVGKELFTHEGPSVVKKLQEENFEVF LDLKFHDIPNTTAQAVCAAADLGVWMVNVHASGGRKMMETCVERLKAGNYQTQLIAVTVL TSMGREDLKDIGLDIEPVEQVKRLAKLTKESGLDGVVCSAQEAKILRELIGQDFSLVTPG IRPEGSNADDQKRIVTPKQAMLDGSTHLVIGRPITKAENPTEMLKSILASIA >gi|333032603|gb|GL891823.1| GENE 58 54164 - 54670 358 168 aa, chain - ## HITS:1 COG:ybjE KEGG:ns NR:ns ## COG: ybjE COG2431 # Protein_GI_number: 16128842 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 4 165 152 313 315 89 37.0 4e-18 MSCTEYLLLLFIFLIGIELAFTHFNRTWLSWKILIVPLAAFIGSCLAGLLNYSLLGHEFT LNEILALGQGYGWYSMSGILFTQLHSAELGGIALLTDLFREIVAILLMYTMGWRFPRPAI SSAGATSMDVTLAMVKQSCGTHYVPHAMMSGLLLSLLAPLLITVFLNF Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:26:58 2011 Seq name: gi|333032602|gb|GL891824.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld13, whole genome shotgun sequence Length of sequence - 85384 bp Number of predicted genes - 74, with homology - 74 Number of transcription units - 49, operones - 19 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 448 321 ## ABBFA_000205 hypothetical protein - Prom 597 - 656 10.8 - Term 790 - 850 8.5 2 2 Op 1 . - CDS 888 - 1283 499 ## COG1741 Pirin-related protein 3 2 Op 2 . - CDS 1330 - 1758 536 ## COG1741 Pirin-related protein - Prom 1915 - 1974 4.4 + Prom 1864 - 1923 5.7 4 3 Op 1 1/0.286 + CDS 2036 - 2662 835 ## COG1335 Amidases related to nicotinamidase 5 3 Op 2 . + CDS 2683 - 3657 702 ## COG0583 Transcriptional regulator + Term 3667 - 3702 5.0 - Term 3695 - 3727 3.3 6 4 Op 1 12/0.000 - CDS 3763 - 5211 1737 ## COG1012 NAD-dependent aldehyde dehydrogenases 7 4 Op 2 . - CDS 5208 - 6500 1732 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 6656 - 6715 3.5 + Prom 6501 - 6560 3.9 8 5 Tu 1 . + CDS 6657 - 8156 1345 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Term 8186 - 8218 4.0 - Term 8163 - 8215 14.2 9 6 Tu 1 . - CDS 8221 - 9663 1264 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 9730 - 9789 4.7 - Term 9861 - 9908 1.1 10 7 Tu 1 . - CDS 9969 - 10517 668 ## COG1396 Predicted transcriptional regulators - Prom 10546 - 10605 6.9 + Prom 10486 - 10545 1.5 11 8 Op 1 . + CDS 10586 - 11281 550 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 12 8 Op 2 . + CDS 11278 - 11601 341 ## ABSDF3391 hypothetical protein + Term 11602 - 11646 4.5 - Term 11591 - 11631 7.5 13 9 Op 1 4/0.048 - CDS 11642 - 12223 760 ## COG0629 Single-stranded DNA-binding protein 14 9 Op 2 . - CDS 12275 - 13639 1516 ## COG0477 Permeases of the major facilitator superfamily - Prom 13703 - 13762 6.9 - Term 13723 - 13758 4.0 15 10 Tu 1 . - CDS 13786 - 14835 1149 ## COG2899 Uncharacterized protein conserved in bacteria - Prom 15067 - 15126 6.9 + Prom 15043 - 15102 5.0 16 11 Tu 1 . + CDS 15131 - 15805 814 ## COG0819 Putative transcription activator + Term 15819 - 15859 7.2 17 12 Op 1 . - CDS 15855 - 16196 333 ## COG3136 Uncharacterized membrane protein required for alginate biosynthesis 18 12 Op 2 1/0.286 - CDS 16249 - 16602 410 ## COG3759 Predicted membrane protein - Term 16623 - 16656 3.1 19 13 Op 1 1/0.286 - CDS 16667 - 17644 1283 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 20 13 Op 2 . - CDS 17648 - 18250 548 ## COG1309 Transcriptional regulator - Prom 18319 - 18378 7.0 + Prom 18351 - 18410 6.4 21 14 Tu 1 . + CDS 18547 - 21378 3368 ## COG0178 Excinuclease ATPase subunit + Term 21383 - 21418 4.4 22 15 Op 1 . - CDS 21393 - 23048 1021 ## PsycPRwf_1996 hypothetical protein - Prom 23069 - 23128 2.9 - Term 23062 - 23110 -0.5 23 15 Op 2 . - CDS 23131 - 24789 1461 ## COG2199 FOG: GGDEF domain - Prom 24861 - 24920 1.9 + Prom 25523 - 25582 8.6 24 16 Tu 1 . + CDS 25830 - 26729 1107 ## ACICU_03493 34 kDa outer membrane protein + Term 26749 - 26796 11.1 - Term 26746 - 26773 0.1 25 17 Tu 1 . - CDS 26788 - 28755 1857 ## COG1292 Choline-glycine betaine transporter - Prom 28849 - 28908 3.8 26 18 Tu 1 . - CDS 28921 - 29613 386 ## ABBFA_000182 hypothetical protein - Prom 29707 - 29766 6.0 - Term 29722 - 29761 3.2 27 19 Op 1 10/0.000 - CDS 29783 - 31498 1720 ## COG4147 Predicted symporter 28 19 Op 2 . - CDS 31500 - 31832 285 ## COG3162 Predicted membrane protein + Prom 31827 - 31886 9.7 29 20 Tu 1 . + CDS 32016 - 35513 3100 ## COG0591 Na+/proline symporter + Term 35522 - 35566 8.1 + Prom 35662 - 35721 12.2 30 21 Tu 1 . + CDS 35907 - 36674 810 ## A1S_3303 hypothetical protein + Term 36685 - 36726 9.2 - Term 36673 - 36714 9.2 31 22 Tu 1 . - CDS 36717 - 37367 810 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 37545 - 37604 11.7 + Prom 37518 - 37577 14.6 32 23 Op 1 4/0.048 + CDS 37744 - 38481 793 ## COG0431 Predicted flavoprotein 33 23 Op 2 . + CDS 38526 - 39638 1307 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 39694 - 39733 -0.0 - Term 39684 - 39716 3.1 34 24 Tu 1 . - CDS 39746 - 40954 720 ## COG3328 Transposase and inactivated derivatives - Prom 40977 - 41036 4.7 35 25 Tu 1 . - CDS 41056 - 41469 380 ## COG1522 Transcriptional regulators - Prom 41545 - 41604 7.8 + Prom 41392 - 41451 4.1 36 26 Tu 1 . + CDS 41575 - 42117 590 ## COG1335 Amidases related to nicotinamidase + Term 42123 - 42174 10.1 - Term 42110 - 42160 13.7 37 27 Tu 1 . - CDS 42164 - 44113 1987 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 44249 - 44308 7.2 + Prom 44279 - 44338 11.3 38 28 Op 1 . + CDS 44408 - 44983 569 ## ABAYE0178 hypothetical protein + Term 45051 - 45083 -0.9 + Prom 44998 - 45057 3.2 39 28 Op 2 . + CDS 45096 - 46076 1048 ## COG0668 Small-conductance mechanosensitive channel + Term 46111 - 46152 8.5 - Term 46002 - 46044 -0.6 40 29 Op 1 . - CDS 46056 - 46763 673 ## COG1385 Uncharacterized protein conserved in bacteria 41 29 Op 2 . - CDS 46760 - 48052 992 ## COG1519 3-deoxy-D-manno-octulosonic-acid transferase - Prom 48086 - 48145 8.2 - Term 48146 - 48197 7.3 42 30 Op 1 4/0.048 - CDS 48221 - 49279 1489 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 43 30 Op 2 . - CDS 49308 - 49610 309 ## COG0640 Predicted transcriptional regulators - Prom 49656 - 49715 3.5 44 31 Tu 1 . - CDS 49810 - 50742 1243 ## COG1186 Protein chain release factor B - Prom 50795 - 50854 1.9 + Prom 51114 - 51173 12.9 45 32 Tu 1 . + CDS 51298 - 52065 1024 ## ABSDF3445 hypothetical protein + Term 52078 - 52124 12.5 - Term 52075 - 52104 2.1 46 33 Op 1 . - CDS 52110 - 53810 1813 ## COG0608 Single-stranded DNA-specific exonuclease 47 33 Op 2 . - CDS 53811 - 54467 609 ## COG0259 Pyridoxamine-phosphate oxidase 48 33 Op 3 . - CDS 54478 - 55815 1582 ## COG1109 Phosphomannomutase - Prom 55890 - 55949 4.1 - Term 55900 - 55944 10.4 49 34 Tu 1 . - CDS 55965 - 57431 2040 ## COG0516 IMP dehydrogenase/GMP reductase - Prom 57454 - 57513 5.3 50 35 Op 1 . - CDS 57567 - 57932 260 ## COG0727 Predicted Fe-S-cluster oxidoreductase - Prom 57952 - 58011 3.1 - Term 57934 - 57972 2.6 51 35 Op 2 . - CDS 58024 - 58821 688 ## COG0426 Uncharacterized flavoproteins - Prom 58957 - 59016 8.4 + Prom 58931 - 58990 7.5 52 36 Tu 1 . + CDS 59049 - 61205 2336 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 61223 - 61254 2.1 - Term 61198 - 61253 12.8 53 37 Op 1 . - CDS 61265 - 61840 595 ## COG2119 Predicted membrane protein - Prom 61889 - 61948 4.9 54 37 Op 2 . - CDS 62089 - 62361 314 ## ACICU_03523 hypothetical protein - Prom 62423 - 62482 4.1 - Term 62454 - 62491 5.5 55 38 Op 1 13/0.000 - CDS 62510 - 64489 2602 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 56 38 Op 2 . - CDS 64492 - 67209 3582 ## COG2609 Pyruvate dehydrogenase complex, dehydrogenase (E1) component - Prom 67336 - 67395 3.8 - Term 67335 - 67384 7.0 57 39 Tu 1 . - CDS 67460 - 68152 785 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 68386 - 68445 2.8 + Prom 68141 - 68200 4.5 58 40 Tu 1 . + CDS 68260 - 68700 310 ## ACICU_03527 hypothetical protein - Term 68526 - 68580 -0.5 59 41 Op 1 11/0.000 - CDS 68798 - 69700 1003 ## COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase - Prom 69750 - 69809 6.6 - Term 69753 - 69792 7.7 60 41 Op 2 35/0.000 - CDS 69811 - 70986 1502 ## COG0206 Cell division GTPase - Prom 71054 - 71113 6.0 61 41 Op 3 25/0.000 - CDS 71151 - 72413 1372 ## COG0849 Actin-like ATPase involved in cell division 62 41 Op 4 18/0.000 - CDS 72474 - 73328 681 ## COG1589 Cell division septal protein 63 41 Op 5 11/0.000 - CDS 73331 - 74257 1056 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 64 41 Op 6 26/0.000 - CDS 74295 - 75743 1838 ## COG0773 UDP-N-acetylmuramate-alanine ligase 65 41 Op 7 . - CDS 75755 - 76852 1136 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase - Prom 76948 - 77007 5.8 - Term 77027 - 77082 12.2 66 42 Tu 1 . - CDS 77090 - 78040 364 ## PROTEIN SUPPORTED gi|54303152|ref|YP_133145.1| glutathione synthetase - Prom 78061 - 78120 4.9 + Prom 78111 - 78170 5.0 67 43 Op 1 . + CDS 78195 - 78407 259 ## COG5515 Uncharacterized conserved small protein + Prom 78544 - 78603 10.5 68 43 Op 2 . + CDS 78637 - 80826 2033 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 80835 - 80884 12.3 - Term 80828 - 80866 4.0 69 44 Tu 1 . - CDS 80876 - 81526 956 ## COG0461 Orotate phosphoribosyltransferase - Prom 81558 - 81617 3.6 + Prom 81297 - 81356 3.1 70 45 Tu 1 . + CDS 81565 - 82389 805 ## COG0708 Exonuclease III + Term 82593 - 82641 6.4 + Prom 82641 - 82700 5.5 71 46 Tu 1 . + CDS 82845 - 83195 363 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family + Term 83201 - 83229 1.0 - Term 83171 - 83229 4.4 72 47 Tu 1 . - CDS 83233 - 83670 429 ## COG4731 Uncharacterized protein conserved in bacteria - Prom 83772 - 83831 5.2 + Prom 83716 - 83775 5.3 73 48 Tu 1 . + CDS 83820 - 84731 901 ## COG0657 Esterase/lipase + Term 84739 - 84786 14.2 + Prom 84754 - 84813 5.5 74 49 Tu 1 . + CDS 84952 - 85359 405 ## ABAYE0139 GGDEF domain-containing protein Predicted protein(s) >gi|333032602|gb|GL891824.1| GENE 1 1 - 448 321 149 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000205 NR:ns ## KEGG: ABBFA_000205 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 140 1 140 432 300 100.0 1e-80 MDIAIIGSGMAGLAAARILKDAGHTITIFEALPGRGMDSHSIEFDGGIIDAPLRVMNPHL WKNTLSLAAHLGIKTFPVRTYMSCSWLFEDRTETWLTTSRSRIGNFPIINNRKGIQQYGW RLVKGMLQLKTAIHQFFKSKLCTRQISQN >gi|333032602|gb|GL891824.1| GENE 2 888 - 1283 499 131 aa, chain - ## HITS:1 COG:STM0951 KEGG:ns NR:ns ## COG: STM0951 COG1741 # Protein_GI_number: 16764312 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Salmonella typhimurium LT2 # 1 127 160 286 286 139 53.0 2e-33 MRVIAGEYADAKGAASTFSPLNVWDGKLVKGQKHTLYVPEGHTTLVVVLEGAVVVNDTNR LEGKTVAILSREGVEFSLNAEEDTKFLVLTGQPLNEPIEGYGPFVMNTKAEIMEAINDFN RGKFGSIMQEG >gi|333032602|gb|GL891824.1| GENE 3 1330 - 1758 536 142 aa, chain - ## HITS:1 COG:PA2418 KEGG:ns NR:ns ## COG: PA2418 COG1741 # Protein_GI_number: 15597614 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Pseudomonas aeruginosa # 1 141 1 141 286 204 67.0 5e-53 MKKFLGAYQNNHMHWVGDGFPVYNLFSYDRLGQTLSPFLLLDYAAPYNFSPTTEQQGVGS HPHRGFETVTIAYQGEVTHKDSSGGGGTIKTGDVQWMTAGAGVLHEEFHSPEFAEHGGLF EMVQLWVNLPSHSKMPPGKYQD >gi|333032602|gb|GL891824.1| GENE 4 2036 - 2662 835 208 aa, chain + ## HITS:1 COG:ECs0982 KEGG:ns NR:ns ## COG: ECs0982 COG1335 # Protein_GI_number: 15830236 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Escherichia coli O157:H7 # 1 208 1 208 208 370 84.0 1e-102 MAQDYVRLDKDNAAVLLVDHQAGLLSLVRDIDPDKFKNNVLAVANAAKYFNLPTILTTSF ETGPNGPLVPELKEIHPDAPFIPRPGQINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVA FPALSALAEGFEVFVITDASGTFNELTRDAAWDRMSKAGAQLMTWFGMACELHRDWRNDI EGLGTLFSNHIPDYRNLISSYNHNTSQK >gi|333032602|gb|GL891824.1| GENE 5 2683 - 3657 702 324 aa, chain + ## HITS:1 COG:RSp0662 KEGG:ns NR:ns ## COG: RSp0662 COG0583 # Protein_GI_number: 17548883 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 17 313 1 296 297 250 40.0 3e-66 MLKHSNLTFKWVERTLISSFDDFYYFYLVVKHGGFSAASEAENISKSKLSRRIIDLENKF NVSLIQRTTRHFKVTDLGQEFYEECCKVIAQVECAENVLLKQKSEPQGLVKVSCPPLMMH FQIRKILNQFLKTYPKVEISLELTSRRVDILHDDIDLAIRTNFEPNEDSNLIVRDVIKTD HCLVASPELLQGRTIKHYSELQDFPSISLGTQKQNYIWHLCNIRNGESVDVPYQPRIKSN DLAGVYYAVMDGLGIADLPFLTVESEIRKGTLVHILPDWKSNIGMLQLVYVSRKGQRLVV EKLIETLIDELRRLPESHEGYLPT >gi|333032602|gb|GL891824.1| GENE 6 3763 - 5211 1737 482 aa, chain - ## HITS:1 COG:NMA1696 KEGG:ns NR:ns ## COG: NMA1696 COG1012 # Protein_GI_number: 15794589 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Neisseria meningitidis Z2491 # 4 480 2 476 477 584 62.0 1e-166 MIQNNLQYLLKHPDISLEAPASNDYIEVNDAATGETLAWVKTYDRAGVEAAINRSAKAQA AWKKQTALARADVLLAWYNLMLEHKENLAQILTAEQGKPLAEARGEIGYAASFIRWFAEQ ARRVDGEVLTPTLPNQRLLVIKQAIGVTAAITPWNFPAAMITRKAGPAIAAGCSMLVKPA EQTPLTAYALEVLALQAGLPADVLINISGDAVEVGKTLCESDIVRKLSFTGSTQVGRILM QQCAPTIKKLSLELGGNAPVLVFDDANLEQAVQGIMASKYRNSGQTCVCANRIYVQDGIY DALAEHLVEAVSKLKVGDGRQEGSTQGPLIDEDAIAKVQSHIADATEKGATVRIGGQRSA LGGTFFEPTVLTGVTQDMKVSKEETFGPLAPLFRFKTEDEAVAMANDTEFGLAAYLFTQS TARQWRVGEALEYGMVGINTGAISNEVAPFGGVKQSGLGREGSKFGIEEYVEMKYLCVDL SE >gi|333032602|gb|GL891824.1| GENE 7 5208 - 6500 1732 430 aa, chain - ## HITS:1 COG:YPO2844 KEGG:ns NR:ns ## COG: YPO2844 COG0160 # Protein_GI_number: 16123039 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Yersinia pestis # 5 417 3 429 429 503 59.0 1e-142 MDTQHSALNARKQQATPRGVGVMCQWYAEKAENATIWDKEGNQFIDFAGGIAVLNTGHRH PKVIAAVTEQLTKFTHTAYQVTPYESYVALAERINERAPIAGPAKAAFFTTGAEAVENAV KIARCYTGRHGIITFGNGFHGRSFMTMAMTGKTAPYKRDFGVMPAGVFHARYPVPAKGIS VDAAIESVEDIFSEDIAPHDVAAIVLEPVQGEGGFNVVPAEFLKRLRAICDKHGILLVAD EVQSGFARTGKLFAMNHYETKADLITMAKSLGGGFPISGVVGRAEVMDAPNPGGLGGTYA GSPIAVAAAHAVIDAIEEENLCDRANELGAELVATLKDIQQTTSDVVTDIRALGSMVAVE LETAEQAKVVQNYAMENGLLLLTCGKYGNVIRFLYPLTIPAEQFRQGLDILKQGFATLKA GSAKAMEQSA >gi|333032602|gb|GL891824.1| GENE 8 6657 - 8156 1345 499 aa, chain + ## HITS:1 COG:YPO2845 KEGG:ns NR:ns ## COG: YPO2845 COG1167 # Protein_GI_number: 16123040 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Yersinia pestis # 22 491 26 492 501 517 54.0 1e-146 MRSLLGDHLLQRLQQDTEGKLHQRLFRCLRGAIIDGVIQPKTRLPASRDLASEIHVSRNT VLTAYEQLQAEGYLEARTGHGTWVAEKLPESFLNTQNKKKVVSSPKVQSSYALSQRGSNL LGYAAASPHQWGAFVPGAPDVTEFPHHIFSRIQARLSREPDINRLIYSNAGGCIELRSAL ADYLRVARSVQCDADQIIITEGIHQAIDLVSRALSDMGDKVWIEDPAYWGMRNTLRINGL DIQPMPVDAEGIIPEENPAVPPKLIFVTPSHQYPLGSHLSLDRRRQLIQIARQHNSWIVE DDYDSEFRFSGQPYPSLQGLENNAPVLYMGTFSKTIYPSLRIGYLVVPKPLFSPLRIVAA ELYRGGHLLEQKALAEFIREGHYEAHIRRMRLLYGKRRDYLVSLIQRYLGPEFIHEYDEA AGLHLVLKLPNSCDDVAIAATALERGVKVRPLSQYYMQSHAHAERGLLMGFACVNEKDMV MAFGVLLQCLREAGVPTLN >gi|333032602|gb|GL891824.1| GENE 9 8221 - 9663 1264 480 aa, chain - ## HITS:1 COG:ECs3524 KEGG:ns NR:ns ## COG: ECs3524 COG1113 # Protein_GI_number: 15832778 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 9 450 3 442 466 393 52.0 1e-109 MAAHQNGSEANHSQSLKHGLKSRHLTMISIAGVIGGSLFVGSGSIIYNTGPVVFLTYALG GLLVWFIMRMLGEMAVLNPDSGSFSTYADRAIGRWAGFSIGWLYWCTLAMLMGWEAYVAG KILNNWFPFIPIWVYMTVVIVALVVVNLQNVKNYGEFEFWFALIKVIAIVVFLVIGSLAI MHLWPWGNPAASGISNLTSQGFMPNGGSSVITALLGVMFAYIGAEIVTVAAAESANPSKE IRKASNSVVWRIILFYVGSMFVAVCLIPHNNELLKDSTWGTYSVTLSALGIPGARHIVNF VVLTSVCSCFNSALYTCSRMLFSLSKRGDAPKSFGSVNSKSSPWVGVIVSCFFSVIAVIL TATESMNVYDFFMLTTGAATLYVYLTIAYSQLRMRKKLEAEGVKIDFKMWMFPYLTYVVI FAIIGAILTMLIEGTYFKEVIYTTALFGIIVFFGLLSEKLGWGKERRATHLTHSHEEKLV >gi|333032602|gb|GL891824.1| GENE 10 9969 - 10517 668 182 aa, chain - ## HITS:1 COG:STM4042A KEGG:ns NR:ns ## COG: STM4042A COG1396 # Protein_GI_number: 16767308 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 1 182 7 188 188 251 68.0 8e-67 MSQPIEIIAKGLTRERQRAGLSLAEVARRAGVAKSTLSQLEAGQGNPSIETLWALCVALN IPFARLMEEPSNQVQVIRCGDGPTVSSEIANYKAILLATCPPHARRDVYLLIVEPGEDRL SEPHPVGSVEHIIVVEGRALVGLIDEAVELGVGDYICYPADQKHIFRALETGTKALLISE QN >gi|333032602|gb|GL891824.1| GENE 11 10586 - 11281 550 231 aa, chain + ## HITS:1 COG:STM4042 KEGG:ns NR:ns ## COG: STM4042 COG1296 # Protein_GI_number: 16767307 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Salmonella typhimurium LT2 # 19 215 8 204 219 191 56.0 1e-48 MENRSLYHAMTTYALIRKLSKDTTRSIFFVCLATSVVGMSLGSLAASYGLALWIPLCLSI FVLAGTAEFIFIGFLAVGGSPIAAAIAGLLVNLRHLPFGIAVNELIRGKFSQYFGSHIMN DESVLFGMAQPDFETKKAAYWLCGIGIMLSWPLGVTAGYFIGSAIPDPKTFGLDAIFPAI LIALTFSALKNKVTRKAAFAGSTLALITTPFLAAGLPILISLFGLIWGRKK >gi|333032602|gb|GL891824.1| GENE 12 11278 - 11601 341 107 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3391 NR:ns ## KEGG: ABSDF3391 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 107 1 107 107 160 100.0 1e-38 MSQQLLIIVGIALLALGTYSIRFAGFHLGAKFSFSEKYQVLLSNGATVLLCAIAVTTTFF EGHHFAGFARIFGVGLALFLVWKKAPLLLVICLAAAGTALVRLLGIE >gi|333032602|gb|GL891824.1| GENE 13 11642 - 12223 760 193 aa, chain - ## HITS:1 COG:PM1950 KEGG:ns NR:ns ## COG: PM1950 COG0629 # Protein_GI_number: 15603815 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Pasteurella multocida # 1 139 1 139 166 152 57.0 3e-37 MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSEVWTDKNTGERKEQTEWHRIVLHN RLGEIAQQFLRKGSKVYIEGSLRTRQWTDQNGQERYTTEIRGDQMQMLDARQQGEQGFAG GNDFNQPRFNAPQQGGGYQNNNQGGGYGQNTGGYGGQGGFGNGGNSPQGGGFAPKAPQQP ASAPADLDDDLPF >gi|333032602|gb|GL891824.1| GENE 14 12275 - 13639 1516 454 aa, chain - ## HITS:1 COG:yajR KEGG:ns NR:ns ## COG: yajR COG0477 # Protein_GI_number: 16128412 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 2 434 8 442 456 307 41.0 3e-83 MMNALERRSTFALSSIFALRMLGLFMIIPVFSVVGQSYQYATPALIGLAVGIYGLSQAIL QIPFSLLADRFSRKPLVVFGLLLFAIGGAIAGLSDTIYGVIIGRAIAGAGAVSAVVMALL ADVTREEQRTKAMAAMGMSIGLSFVVAFSLGPWLTSLVGISGLFFVTTIMGLIAIAMLLL VPKVTRHHRNYQQGYMAQLKQVIQMGDLNRLHVSVFALHLLLTAMFIYVPSQLIEFAHIP LASHGLVYLPLLVISLFFAFPSIIIAEKYRKMRGIFLTAITGIIAGLLLLIFGYQSKYVL LAGLGIFFIAFNVMEALLPSWLSKSAPIQSKATAMGVNASSQFLGAFFGGTLGGQLLMLH NTAIGWSVLAGIAIIWLLISFGLAQPRYLSSIVLPLPQVQQVNEWTTQLLAIRGIEEVVV MPDQQVAYIKVDKQSLDDASRRDLTQLFGKEVAI >gi|333032602|gb|GL891824.1| GENE 15 13786 - 14835 1149 349 aa, chain - ## HITS:1 COG:DR2226 KEGG:ns NR:ns ## COG: DR2226 COG2899 # Protein_GI_number: 15807218 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 1 345 16 346 349 273 48.0 5e-73 MVCLALSAYWGFTHGPEAGVSTMLKALTITAILAVMEVSLSFDNAVVNASVLRNWDPFWK MIFLTVGILIAVFGMRLIFPVVIVAVTADMGVIEVAKMALNDPKTYSERLMAHHAEISAF GGTFLLLVFLNFFFDDEKETHWFRWLESKLASLASVPAMSVFLALIALIVMAAYVDEVHR LAVVMAGIWGIVVYIGVEVLSHLLGGEPEIDENGNAVLQDGSGAASGVVKAGLGGFLYLE VLDASFSFDGVIGAFAITSDVVVIMLGLAIGAIFVRSMTVYLVEKGTLDAYVFLEHGAHY AIGALAFIMIASGTGVHVPEVVTGLIGVAFIVWAVIASIQYSKREQQSP >gi|333032602|gb|GL891824.1| GENE 16 15131 - 15805 814 224 aa, chain + ## HITS:1 COG:SSO2598 KEGG:ns NR:ns ## COG: SSO2598 COG0819 # Protein_GI_number: 15899325 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Sulfolobus solfataricus # 4 213 5 209 224 139 37.0 3e-33 MLFSQELWQRNLNLYQKILDLPFNQELANGTLDKEAFCHYVIQDAQYLVAYGRVLAVAAA KAFDADDIMQFSDAAKIAIVVERSLHDDFMKNFGVTKEEFKNTPLTLAGHHYTSFLTATA WSESYPVVLAALLPCFWIYAEVGKDIVSKSVPNNPYQAWIDTYAGEEFHTAVRNVIATVD KVAARCDADTLEKMHAAYTMGAKLEWLFWDSAYHQRQWLGLDQI >gi|333032602|gb|GL891824.1| GENE 17 15855 - 16196 333 113 aa, chain - ## HITS:1 COG:VCA0633 KEGG:ns NR:ns ## COG: VCA0633 COG3136 # Protein_GI_number: 15601391 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein required for alginate biosynthesis # Organism: Vibrio cholerae # 1 108 1 108 116 100 62.0 9e-22 MWALFLKCMLGAGVVLIISILSKSKAFYIAGLVPLFPTFALIAHVIVFQQKGAEALQKTA LFGLWSLIPYAIYLAAVYVLATRMSMWSCLGVATLCWVVAAAGLIYGWQLFQS >gi|333032602|gb|GL891824.1| GENE 18 16249 - 16602 410 117 aa, chain - ## HITS:1 COG:AGl3168 KEGG:ns NR:ns ## COG: AGl3168 COG3759 # Protein_GI_number: 15891701 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 111 21 130 137 109 58.0 2e-24 MIGQILIALIAILHVYILVLEMFLWDKPYGMKAFGNNAEKAKLTKVMAQNQGLYNGFLAA GLFWSLLADAPFATSIANFFLGCVLIAGIYGGLTASKKIIYIQAVPALIALVAVNFL >gi|333032602|gb|GL891824.1| GENE 19 16667 - 17644 1283 325 aa, chain - ## HITS:1 COG:Cgl3015 KEGG:ns NR:ns ## COG: Cgl3015 COG0604 # Protein_GI_number: 19554265 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Corynebacterium glutamicum # 1 324 1 324 325 319 49.0 5e-87 MRSIIHRNFGEPVDVLEQADMPKPEPKAGEVRIKTIMSPIHNHDVWTVRGSYGYKPTLPA IGGSEAVGIVDALGEGVEHVQVGQRIAVAAVHGSWAEYFIAPAQGIIPLNNEIDDETAAQ LIGMPISALMLLDFVNVQPGQWLIQNTANGAVGKTVAMIAQARGLPVINLVRRSDAIAEM QALGIQHVVATDQPNWKEQVKQIHGDQPLIAGVDSIGGSASGEMLNLLSENSLLVSFGSM TGETMQISSGDLIFKQATVKGFWASVVNKEMPAARKKELIVELLTLATQKKLILPVEGVF SFDEIKTAAQRATQGARQGKVLLKP >gi|333032602|gb|GL891824.1| GENE 20 17648 - 18250 548 200 aa, chain - ## HITS:1 COG:PA2196 KEGG:ns NR:ns ## COG: PA2196 COG1309 # Protein_GI_number: 15597392 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 196 6 193 194 172 47.0 3e-43 MKRLNKSETTRQHILDTSFELVLHKGFVGVGLQEILKACDVPKGSFYHYFASKEAFGCAL LEQYMANYKVRMEQLWQHSEQSAHARLMALWQAWIDDPVHGSWAENCLIVKLAAEVSDLS EDMRQILNDGVHKLTQRLALLLKEGQQEGSIPKHIDPLKTAQVMYQLWLGAALLTKLSQD KAHLHLALETTQQLLKPIEE >gi|333032602|gb|GL891824.1| GENE 21 18547 - 21378 3368 943 aa, chain + ## HITS:1 COG:PA4234 KEGG:ns NR:ns ## COG: PA4234 COG0178 # Protein_GI_number: 15599430 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Pseudomonas aeruginosa # 6 943 4 941 945 1345 69.0 0 MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLS AYARQFLSQMEKPEVDSIEGLSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTP YCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRERKGEYSNLFEQLQGQGFVRAR VDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPE LAISEGAIRGWDRQRPYYYSMLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLS YIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQYLSNAACDACGGSRLNEISR HVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGN TVLVVEHDEDAIRAADHIIDIGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIE VPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCVTGVSGSGKSTLINRTLLPLA ATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEV GYKGKNISDVLEMTVEDAAEFFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRV KLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHELRNKGNTIVVIEHNLDVIKTA DWVVDLGPEGGSGGGMIIAEGTPEQVAKVEISHTGRFLKPMLK >gi|333032602|gb|GL891824.1| GENE 22 21393 - 23048 1021 551 aa, chain - ## HITS:1 COG:no KEGG:PsycPRwf_1996 NR:ns ## KEGG: PsycPRwf_1996 # Name: not_defined # Def: hypothetical protein # Organism: Psychrobacter_PRwf-1 # Pathway: not_defined # 3 528 4 559 583 174 28.0 8e-42 MKVLDKEKRLKELLENNIRNEKIGTAIAITGPWGVGKTFFWKKFIEKNNFKRKYIYVSLF GLQSLSDLKTHIYSNIENNHSTLEVPRWIRGLPAIFKDTRVSHFGLSTSTKIFDSLMFSQ VKDAIICFDDFERMSNKLDIKDVMGLANYLKLEKNCQVILILDENKTASENKKNYAEYKE KLIDTTIPIDSVKSLIQENTEDFEGDEILVELMFEFAETLEIHNFRFFQKVIKLYRDFRK SLPEAVADSTKETILIRILQGYLIQDIPELEYGWNDCKYFPLDQQKDWSDRRKKTYKSLI DLSNVCIKGDGDLWFIEFKKWFDQKENFSIESIKELAQSELISDKNNKLKDKLSALFDER DNYQASDDFIDRLFYLACQCIGVSSLLDLRACISTLEDFDELEKAQLLETKVELWIKEKL SKNRSAFKGSGLFGSHGFEDFIQMFLKQNPDLDLPLLKDAIYNKYINQYSEQDIKRITSA DKTSLYQFIFKDFPEDNRFLNTRVHNLVVNLPNVQKELLIEILNERAKNSNFQKKYANYL ISKLINEKKES >gi|333032602|gb|GL891824.1| GENE 23 23131 - 24789 1461 552 aa, chain - ## HITS:1 COG:AGc3648 KEGG:ns NR:ns ## COG: AGc3648 COG2199 # Protein_GI_number: 15889298 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 550 14 568 579 150 26.0 4e-36 MLVIILSLLFMAVPLIVSSYQEYLKTKQALVEIKSLRSIAEVANKVSKERAPANKLMSSN AADFLKNQKNLKEYRLSVDRQLNETIHILKEEGYTDLANTLDTKFRDDLKQARAVVDYYV ATPEQARSSIQFDNAILAMFGAWDSRREVLQNLMLQLKSKDSQINNYFTLIVVLTDMRDQ AGRTASNVIAPVTFKETIPNDNRARSLQTQQQARYLWALVDTLQSEQAKTPEYHRLYSRV KTEFLDKGVPIVGQLLDESQKHQAYHLNGTELTDQIVDKFTTVIDLQKFLLNKSVLIASQ ENYLAKKKFFLTLLISSISLAAALLTLIYAKRRVFEPLIQARTLILDLSHSTDYPIDELK PKKGEFISLFEAIDRLQRMLKQRDAFEFQLKNIANTDPLTGVSNRLALSEYLKIVESYPQ QFSQTCLMIIDIDRFKHVNDQYGHIVGDQVIRRIADQLKANVRASDLIVRYGGDEFLILL EQVQFLDARLLAEKIRIAISLEEIDLSGTQEKLHVSVSIGFAIGATSWMELLENADRSLL RAKARGRNVVEG >gi|333032602|gb|GL891824.1| GENE 24 25830 - 26729 1107 299 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03493 NR:ns ## KEGG: ACICU_03493 # Name: omp # Def: 34 kDa outer membrane protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 299 1 299 299 534 100.0 1e-150 MKKLGLATAVLLAMTGAHAYQFEVQGQSEYVDTTANDKNFTGDVAGTFYLKNVDTAKGPL AEAAFLNQASSVSLGYSYQQYDQNNVNYHIGTYGVKGEAYVPTPYLPVYASATYNHTDVD GKNNFSKDDNGDRYALEVGAMLLPNFLMTVGYTSVANQFALDNFGIIGNGIYSAVNQTAA IQNDQDAVTARAKYVGPIDGTNMAIGFEAAGAFGQENQYGLKTDLYLTPKLSVGATFVGN DGEADIKGNDLGEFRQAWGGNVNYFITPALAVGASYMKADVKKSSYDTQTIGLNAKFRF >gi|333032602|gb|GL891824.1| GENE 25 26788 - 28755 1857 655 aa, chain - ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 10 654 9 661 661 692 55.0 0 MPSKQASWFANVNPNVFLGTVIIIALFLAVVVIAPSSFELLTQQLKQWITDSFSWFYVLS VAFFLILLIYIACSAIGRIKLGPDHSQPEYSNGSWFAMLFTAGMGIGLMFFGVAEPVMHY VNPPSGEPQTIEAAQQALRVTFFHWGLHAWAIYAVVGLALAYFAYRHNLPLKTRSALYPL IGKKIYGPWGDSIDIFATIGTVFGVATSLGFGVTQINSGLHYLFGIEQSTTTQVLLIIFV SILASLSVFLGLDKGVKRLSELNLVLALILLVFVFIAGPSIYLLQTTIQNTGQYISNLFT MTFNLYAYQPNGWIGGWTILYWAWWISWSPFVGMFIARVSRGRTIREFIVGVLLIPTGFT IIWMGFLGNAALFSIIHEHQTTLIQAVQQDSSVALFEFLGHLPWSGVMNILATILVVLFF VTSADSGALVTDYLTAKTENSPTWQRLFWTVLMAVLAIILLLVGGLAALQSSIIMSALPF TVVMLLMSWGLIKALHLDVTKMIAIQEARITPRAIHNPRSWQQRLGLIMHYPHSEEEVKQ YIEKQVSRAFENIQHEFRRRHLEVSISEVEDGMQLRVDHHHEINFIYKVVSRETVPPSFL IGRTEAEDGQYFQAEVFLREGGQNYDVMDWTQEDLIQDIIDQYERHLHFLNIVRS >gi|333032602|gb|GL891824.1| GENE 26 28921 - 29613 386 230 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000182 NR:ns ## KEGG: ABBFA_000182 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 230 1 230 230 375 100.0 1e-103 MRSIIEFWSSFRLLPSAWLLLVQFILLILAMLTFDNEAYRTLTWALGVLALLIIAKVIRQ TPMFTFLGLAFVSGAIIASVFILLGYSNLTIQIFAHSCEALAYFSAAYGLFRYMFADRYL TRDELFAAAAVFTLLAWGFAFLYNICQLLIPNSFQNPNHIHHLQTWLDLLFLSFSLQSAT GLSDLMPLSPPARVLAMLQMFCGVMYLALIVTRLIALQYIKHTPKKNSDK >gi|333032602|gb|GL891824.1| GENE 27 29783 - 31498 1720 571 aa, chain - ## HITS:1 COG:YPO0251 KEGG:ns NR:ns ## COG: YPO0251 COG4147 # Protein_GI_number: 16120588 # Func_class: R General function prediction only # Function: Predicted symporter # Organism: Yersinia pestis # 13 571 7 551 551 637 64.0 0 MKWNSFKAKALLAAASLYSTVAMASPDLGEAEQQATNWHAIIMFIIFVGFTLFITKWAAK QTQSAQDFYTAGGGISGFQNGLAIAGDYMSAASFLGISAMVFSSGFDGLLYSLGFMVGWP IVLFLVAERLRNLGKYNLSDVVSFRLEEKPVRTLAAFSSLVVVAFYLIAQMVGAGQLIKL LFGLNYNIAVVIVGLLMMAYVIFGGMLATTWVQIIKAVMLLSGATFMAFMVMKAVGFSFS NMFTQSIEVFSKVHDVSFEDAAKIMGPGKLAANPIDALSLGLALMFGTAGLPHILMRFFT VKDAKEARKSVVVATGFIGYFYLLTFIIGFGAILFVSNNPQFLDVAKMAMTGKLELVGGN NMAAVHLSDALGGDLFMGFISAVAFATILAVVAGLTLSGASAISHDLYANVFKKGQTTPA SELRMSKIATLGLAIFAMILGILFEKQNVAFMVGLAFSVACCANFPILVLSMFWKGLTTR GAVIGGVVGLVTAVVLIILSKAVWVDTLKISDTPINPFNGPALFAMPLSFLCCWFFSVTD SSARAKKERASFDAQYVRSMTGIGASGASDH >gi|333032602|gb|GL891824.1| GENE 28 31500 - 31832 285 110 aa, chain - ## HITS:1 COG:YPO0252 KEGG:ns NR:ns ## COG: YPO0252 COG3162 # Protein_GI_number: 16120589 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 101 1 102 103 87 40.0 5e-18 MDQSQVEQILRNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSGGVT TWGIPLGLGIIVLSFLLCGVYSYIANNTLDQLSEEALKEVEAITHEKGLH >gi|333032602|gb|GL891824.1| GENE 29 32016 - 35513 3100 1165 aa, chain + ## HITS:1 COG:VC0303_1 KEGG:ns NR:ns ## COG: VC0303_1 COG0591 # Protein_GI_number: 15640331 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Vibrio cholerae # 1 611 1 588 588 376 38.0 1e-103 MNSWLIIGVLTLYIALLFVCAFFGEKHASRLSTRGRMFLFSLTLGVYCSSWTFYGATGAA VREGVIFLPIYLGPLLFVWFGYDIWRRLGRVRQHHAISSIADFVAARYGKSGVLASLVTI LAVIAIIPYLALQLRAIALSTSVIMEQSSHIHTTTNSVLLLTSVLAILAMIFGTRQIANT EQHGGLMLAVAFESFVKLFALLCVALFFIFESPANLSQMTSDVNQTFQEVQLFGVPETFW IQTLLAGLAIICLPRQFHVAVVELRDEKHIRGARKWFAVYLILTILAIIPIASWALHAAP KFLTVPDVAVLSLPLSYNQEWLALLAFLGGFSASTGMLLVSSVALSIMLSNDLIMPALWR FKLLSRHDKHLPKVLKFSRRISIVAVMLLGFLFFHFFNDINQLSVFGLLAFSAVAQFAPA LIGGLYWRGGSRQGVYAGLIIGFLMWSYTLLFPTILRSLPEAYQETAQSILLFGPFGINA LRPESLFGFESFAPLTHGVIWSLGLNIVLYIWISKIYRPSVAEQIQAESFFYYETKPLPS PHTSTDLTYLPHDAARLKVGDLFALAKRITGEQPTTQAFENFCEQNHLTLNPNSIANGMW WRFTEQYLAGIIGAASARTLLTTAMINNGLALGQVANILDQASQWQRFNQNLLMTMIDHM TQGVSVVDKNMCLVAWNNQYLKLFGYPKDLVYVGCPIADLIRYNAERGECGPGSVEEHVR KRLHWMKVGSAHEFERIRKDGRVIQMRGNPIAGGGFVTTFADITAFRANEAVLEARVKDR TQQLADALTEQQLAREQADMANMSKSRFIAAASHDLLQPMHAARLFSTVLEQSISTEEDR QTLQQLDRALYGAESMLSALLDIARLEGGTIQPKRQPYPLHDLLSDLELQFKSIAAQRNI SLKVHDVSFWIDTDPQWIRRIIQNFVSNALRYTAKGRVVVGVLRSAQQSGHIRIGVWDTG PGIAEEQRIKLFQEFERCGHLSPWGEQGLGLGLAIVQRMTGLLNYPVHVYSELGKGSCFM IEVPIVEPPKVATPAVQAVPLKTKAYRILCLDNDETILEGMSSLLGRWGYQVFKATEPEQ ALEIIQKENIQVWLIDQHLNHNQLGVDFITQNRQEDVPVALITADSHPELPQQLKELNIV LLKKPLKPASLRAWLSGLKIASTTD >gi|333032602|gb|GL891824.1| GENE 30 35907 - 36674 810 255 aa, chain + ## HITS:1 COG:no KEGG:A1S_3303 NR:ns ## KEGG: A1S_3303 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 255 7 261 261 503 99.0 1e-141 MNISDNTPQGQLSSQQFYRQYSANALLPELDWQSIFPHSKLSEAHIKALNTIYQCAVPLA LNVFHDLNFDVFAPAAYHPQGLGLFDKLAQQEENFLKVLTAESENLDHETRHQIWSMLLR GGAVLVFKAWLGHVKLGENQLDMTQFDELSDLLFIKTPPHQLAERLHVDEKAKLDHIFLM YGNDIFLDRFNSLETAALFVDLGVYDAAFLSLRDDCVAEYLKSKGYVTQEQIDDLQCALN PLYCDSLTPKQDCLA >gi|333032602|gb|GL891824.1| GENE 31 36717 - 37367 810 216 aa, chain - ## HITS:1 COG:PA3604 KEGG:ns NR:ns ## COG: PA3604 COG2197 # Protein_GI_number: 15598800 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Pseudomonas aeruginosa # 3 209 6 210 217 206 54.0 4e-53 MNILIVDDHPLFRHALIQAVRYSLPQAQIHETASVDEFYERLENGAEPDLVLLDLNLPGA SGFSALVYVRAQYPSIPIIVVSAHEEASIIQRAIAHGAMGYIPKSAHPSHIGEAIRQVLD GEIWLPPNLPSNINLDPRAADETALAERIQSLTPQQFRVLMMVAEGLLNKQIAYELDVSE ATIKAHVTAIFRKLGVQNRTQAVLAISALNIEDKKI >gi|333032602|gb|GL891824.1| GENE 32 37744 - 38481 793 245 aa, chain + ## HITS:1 COG:PA2357 KEGG:ns NR:ns ## COG: PA2357 COG0431 # Protein_GI_number: 15597553 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Pseudomonas aeruginosa # 7 196 2 184 186 177 51.0 1e-44 MTGITSSKPLNIVAVSGGLNTPSKTESLVQAILDELSEAIDIKVHFIKLSEIGPLLGGAF YRNQLPQRVQDDLAAVEAADALIVGTPVYRASFTGLFKHFFDFVEQTALVDVPVLLAASG GSDRHALVLEHQLRPLFSFFQAQTLPIGVYATDRDFTPEYTVKSEQLSDRITLAVARALP ILEWAPAKGKRAEVVKPKSQQANQELGINKQIEQEEVLPSAAVPNLDAAESRLHHKSGKS LTHVA >gi|333032602|gb|GL891824.1| GENE 33 38526 - 39638 1307 370 aa, chain + ## HITS:1 COG:PA3954 KEGG:ns NR:ns ## COG: PA3954 COG2141 # Protein_GI_number: 15599149 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 362 1 362 364 570 77.0 1e-162 MTQLQQPIKFAYWVPNVSGGLVVSNIEQRTDWSYDYNVRLAQAAENNGFEYALTQIRFTA GYGAENQHESVSFSHALLAKTEKLKVIAAILPGPWKPALAAKQLATIDYLTQGRIAINVV SGWFRGEFDAIGEEWPEHDERYVRSEEFIRTLKGIWTTDNYSFDGKYYQFQNYTLKPKPL QKPHIEVFQGGSSRAARDMASRVSDWYFTNGNTVEEIQKQVEDIRAKAKANNHQVKIGVN AFIIARDTEEEAKAVLQEIIDKANTEAVNAFGDATREAGAASPEQEGNWAKSTFEDLVQY NDGFKTNLIGTPQQIAERIVALKNVGVDLILSGFLHFIEEVEYFGEKVLPLVRQLELQQE KEVEIQAKSA >gi|333032602|gb|GL891824.1| GENE 34 39746 - 40954 720 402 aa, chain - ## HITS:1 COG:YPO0011 KEGG:ns NR:ns ## COG: YPO0011 COG3328 # Protein_GI_number: 16120364 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 402 1 402 402 600 71.0 1e-171 MDEATIKSMAAELAKGLKTPEDLNQMTAVFKKFMIETALNTELSDHLGYEKHQPKKGSNS RNGFSSKTITTQDGQLALDIPRDREGSFEPQIIKKHQTRITSMDDQILSLYAKGMTNREI VAFFKEMYDADVSASLISKVTDAVIEQVTEWQNRALDSLYPVVYLDCIVVKVRQHSNVIN KSVYLALGINMDGQKELLGMWIAQTEGAKFWLSVMTELKNRGVQDILVACVDGLKGFPDA IASVYPHTDIQLCIVHVVRNSLRFVSWKDYKAVTSGLKAIYQASTEENALKSLDIFCDQW NHQYPKIGESWRANWENIRTIFSYPAEIRHAIYTTNAIESLNSVIRHSTKKRKIFSSDDS VKKVIYLATSNAAKKWTMPIQNWRLAMNWFTIQFDDRLKDHL >gi|333032602|gb|GL891824.1| GENE 35 41056 - 41469 380 137 aa, chain - ## HITS:1 COG:BS_lrpB KEGG:ns NR:ns ## COG: BS_lrpB COG1522 # Protein_GI_number: 16077573 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 3 136 1 139 149 70 31.0 1e-12 MNIELDPIDLKIIALLKQDSRLTNKEIGQRVHRTGQAVGARIAQLMDAGVIKNYTIAVQY RHKQFIHLHLNEQRSFEEIENLVKQYEQIDECFKVMGNACYMIVSHFEPAELNAFIEVLS KWCRYSVETVIREVEKA >gi|333032602|gb|GL891824.1| GENE 36 41575 - 42117 590 180 aa, chain + ## HITS:1 COG:BS_yddQ KEGG:ns NR:ns ## COG: BS_yddQ COG1335 # Protein_GI_number: 16077574 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Bacillus subtilis # 1 177 1 179 180 142 43.0 3e-34 MKQALLVIDVQNDYFKNGKMELVGPDQALDKIKQLEQYFNEKDLPIIYVQHINPPQASFF QENTEGVLLHPELSAGSDSLIVTKHYPNSFLETNLEELLKAHQIEQLVITGMMTHICIDS GTRAAKELGYQPILIGDATATRDLNHNGKTVKAEDVQTAFLATLGIFASVQNTAEFLAKF >gi|333032602|gb|GL891824.1| GENE 37 42164 - 44113 1987 649 aa, chain - ## HITS:1 COG:YPO0253 KEGG:ns NR:ns ## COG: YPO0253 COG0365 # Protein_GI_number: 16120590 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Yersinia pestis # 5 640 7 642 652 905 66.0 0 MNEIYPVPEEFKKTARTVEADYFKRYQHSIENPDEFWAEQAKIVDWIKPFTQVKNTSFDK DNFKIEWFADGELNVSANCLDRHLKEHPHKPAIIWEGDHPSRHKIVSYKELHDEVCRFAN VLKKYGIGKGDRVVLYMPMVTEAAIAMLACARIGAVHCVVFGGFSPDSLASRIEDSQAKL VITADSSLRAGKLLPLKENVDLALALPGTECVENVIVVYRNANPIEMKPGRDLWYHLIIM EVDANCPPEPMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYVASTFKEVFDLKQDDVYW CTADVGWITGHSYLIYGPLANGTTTLMFEGVPQYPTWARLGHVVDKHKVSILYTAPTAIR AMMREGDSYVRESNRSSLRLLGSVGEPINPEAWNWYYNVVGEGRCPIVDTWWQTETGGIL IAPLPGATALKPGSATRPLFGIQPAIVDGEGNELEGAAEGNLVIKDSWPGQMRTIWGDPD RFIEAYFSTFKNTYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVSHEAV AEAAVVGMPHDIKGQGICTFVTLQAGVPESEELRKELISWVRKVLGPVASPDALHWAPAL PKTRSGKIMRRILRKIAANELDSLGDTSTLAEPAVVDQLITTVYPDRQK >gi|333032602|gb|GL891824.1| GENE 38 44408 - 44983 569 191 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0178 NR:ns ## KEGG: ABAYE0178 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 191 1 191 191 306 100.0 4e-82 MFAETPSSRPPQLPFKDSPFSIHGRFNRMSYLGGYGLIYLVTIVGYFILASFLGSFQLSS DLFNFEFYSSLSGISALMVWAFWLFLIYLNIILVVRRLHDLNKSGWMGLLLFIPVVQFFF MLYLLLASGTAGTNQYGPVRPSTFIEKLMAWLILIAILISLISTAGFFYYFSGTDTIQTP TQILQKGTEYF >gi|333032602|gb|GL891824.1| GENE 39 45096 - 46076 1048 326 aa, chain + ## HITS:1 COG:alr3020 KEGG:ns NR:ns ## COG: alr3020 COG0668 # Protein_GI_number: 17230512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 40 307 8 275 330 224 44.0 2e-58 MADEQKSLTDVAKNTGELLQEAGTKTTQTVLAHTEKYHDAYTTIDKIVDSFWERVPYICI AIVVFLIFWLLTKLFKFFVRKTLENRSYTRQNLVLVLNRVGSTAILFFGFLIALVIMIPG FTPGQLMSALGIGSVAIGFAFKDIFQNLLSGILILLSEPFRIGDSIVVNSLEGTVEDIQI RATFLRSPDGRRIVIPNATVYTSALTVNTAYQQRRCEFVVGIGYDDDEQKAKQIILDILN NDRNVLSQPAFSVNVTALADFSVNLTVRWWVDTTETDISSSISNIQAQVKQAFNENDIDI PYPIQELKMVSNPPALNPETSAKQTT >gi|333032602|gb|GL891824.1| GENE 40 46056 - 46763 673 235 aa, chain - ## HITS:1 COG:PA5071 KEGG:ns NR:ns ## COG: PA5071 COG1385 # Protein_GI_number: 15600264 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 234 1 235 235 178 42.0 6e-45 MNIVLLEPEDVQSDTWSIHSKRQLQHLREHLDITVGQNLKVGIRNGARYITEIVSMNEHE VRIRPICEELLPAKLPVHLIVALPRPKVLRRLIMDSVTLGVERISLIHSYRVDKSYWQTP FLQQIDNYVTLGLEQAGDTIVPEIQLYKRFKPFVEDVLPSLITQETPAYVAHPYAEQRMP INISHACSVVVGPEGGFIPYEVDLLIKNGCQAMSLGNRILRTETSISYILGRLFS >gi|333032602|gb|GL891824.1| GENE 41 46760 - 48052 992 430 aa, chain - ## HITS:1 COG:PA4988 KEGG:ns NR:ns ## COG: PA4988 COG1519 # Protein_GI_number: 15600181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic-acid transferase # Organism: Pseudomonas aeruginosa # 7 416 6 411 425 271 38.0 3e-72 MATPFWYNTALHLLKPFYRWRIKRRAESLELYQQECLERFGPFEAPKNVKAIWFHAVSVG ETNAAQPLIEYYLKLGQPVLVTNTTKTGQARAKSLFLKEPYLDLFQAVYLPVDQKPLLKK FFELYQPKLLALVETELWPNLIDQAKLQHVPCLLLNARLSEKSAKGYGKVSGLTAGMLKQ LDWVLAQDSATRQRYVELGLDEHKSQVVGNIKFDIHAPEAFVKQAAQLHQQWYLENRQVV TIASTHAPEEQQILEALAPYLNSDRELVCIVVPRHPERFDEVFEICQNLNLITHRRSMGQ SIHASTQVYLADSMGELWLWYALSQVCFVGGSLNEPGGGHNILEPMVLNVPTVVGPRYFN FQTIVDEFIDENAVLIAQDAQQVVDIWLACLAEPEATEQLVVQAHKVLQRNQGSLQKHIG VINRYLAEKS >gi|333032602|gb|GL891824.1| GENE 42 48221 - 49279 1489 352 aa, chain - ## HITS:1 COG:PA4356 KEGG:ns NR:ns ## COG: PA4356 COG1902 # Protein_GI_number: 15599552 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Pseudomonas aeruginosa # 1 349 1 349 350 440 61.0 1e-123 MAELNTPLIVGDFEIKNRLVMAPLTRARSGESRVPNDLMVQYYQQRANAGLILTEATVIG SKTVGYADTPGLWSQEQAQAWNKIIEAVHAQGSKIVVQLWHVGRISHPELLDGDIPVAPS AIQPAGEVSLLRPKRPYVTPRALSIEEIQEIVAQYKHSAELAKAAGFDGVELHAANGYLI DQFLQSNTNQRDDEYGGPVENRARLLLEVVDAFIEVWGAGRVGVHIAPRGDSHDMGDENP LATFGYVVEQLSQRNVAFIFSREYEAADSISPQLRKKFNGVWIANENLTPESAKRILREG QADAVSFGKAYIANPDLLQRLEQGLPLNELQPTTLYAKGAEGYTDYPALEAS >gi|333032602|gb|GL891824.1| GENE 43 49308 - 49610 309 100 aa, chain - ## HITS:1 COG:PA4354 KEGG:ns NR:ns ## COG: PA4354 COG0640 # Protein_GI_number: 15599550 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 100 3 100 100 98 49.0 2e-21 MDIDAISKALANPLRRQILQWLKEPEHYLPVEECGGSFEKGVCAGHIERLGKVAQSTMSN HLSVLQQAGLIQVQKYGQWSYFSRNEALIQQYIEHLKQTL >gi|333032602|gb|GL891824.1| GENE 44 49810 - 50742 1243 310 aa, chain - ## HITS:1 COG:YPO0889 KEGG:ns NR:ns ## COG: YPO0889 COG1186 # Protein_GI_number: 16121194 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Yersinia pestis # 1 310 57 366 366 427 69.0 1e-119 MAKEKGELENVINVLDGLSTQLEDAKAMLDLAVEADDESLLEDVQSELSTAEEELAKLEF RRMFSNPMDPNPCYVEIQAGSGGTEAQDWASMLLRMYMRWIERHGFKAELMEVSDGDVAG IKSATIRVEGEYAYGWLRTESGVHRLVRKSPFDSGNRRHTSFSAVFISPEVDDNIEIDIN PSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIVVACQNQRSQHANRDHAWKQLRAKL YELEMQKRNEAAQALEDSKSDIGWGSQIRSYVLDDSRIKDLRTGVENSNTGAVLDGDLDR FIEASLKQGL >gi|333032602|gb|GL891824.1| GENE 45 51298 - 52065 1024 255 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3445 NR:ns ## KEGG: ABSDF3445 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 255 1 255 255 419 100.0 1e-116 MKKLAIASALLSALAVSGAANAYQAEVGGSYNYLDPDNGSSVSKFGVDGTYYFNPVQTRN APLAEAAFLNRASNVNAHVNYGDNSGTKDTQYGVGVEYFVPNSDFYLSGDVGRNEREIDN TNIDSKVTTYAAEVGYLPAPGLLLALGVKGYDEKDGKDGADPTVRAKYVTQVGQHDVNLE AYGAFGDLDEYKVRGDYYIDKTLSLGVDYYNNDLTDKDEFGINAKKFLNQQVSVEGRVGF GDNDNTYGVRAAYRF >gi|333032602|gb|GL891824.1| GENE 46 52110 - 53810 1813 566 aa, chain - ## HITS:1 COG:PA3725 KEGG:ns NR:ns ## COG: PA3725 COG0608 # Protein_GI_number: 15598920 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Pseudomonas aeruginosa # 4 564 1 568 571 500 48.0 1e-141 MTKIQIKQRPLLTRPEQFQGVPPFIAEILARRGVQSEQELELKLKNLLAPELKGLDAAVA LMDQAIDEQKKIVIVGDYDADGATSTALMMLVLRDMGAQVDYLVPDRFKYGYGLTPAIAE LAHHTYQPDLLITVDNGISSHAGVDAAHALGMQVIITDHHLTTKETPLAEAVVNPNQLGC EFPSKALAGVGVAFYVLANLASLRNRQGKSTSKVTQYLDLVALGTYADVAVLDYNNRILV DAGVKRIQQHQCRVGILALLDIAGREATSIRAQDLGFVLGPRINAAGRMESMRIGIECLL ADTMETAYPIAQQLNQLNIDRRQIEGEMKQQALSALDSLQLSQQDIPAALVLFEENWHQG VIGIVAGRLKEQFHRPTIVFAPDEDGIHIKGSARSIDGVHIRDTIEQVAEQHPELVSHFG GHAAAAGLTIRKENFEAFKTVFNDCVAAMDESIFQATLWTDGELPVSALQLDTLNWIERL GPWGQKFPLPQFEGYFKVIDFRWLKETHLKLRLAIDQYSFDAIAFNAAGRFEFDPMRDHV HLVYEIDRNVFNGNVSLQLRIVHLNQ >gi|333032602|gb|GL891824.1| GENE 47 53811 - 54467 609 218 aa, chain - ## HITS:1 COG:DR0495 KEGG:ns NR:ns ## COG: DR0495 COG0259 # Protein_GI_number: 15805522 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxamine-phosphate oxidase # Organism: Deinococcus radiodurans # 5 218 1 214 214 235 56.0 4e-62 MSDVIKDLSELRLSYEQGELYETQVASNPHEQFLGWLNHALAANLHEPYAMSLATASASG RPHVRTVLLRGATEAGYDFYTNYDSQKGIDLAENPYAELLFYWPSLERQVRVGGHVVKIP EQESTDYYHKRPRDSQIAAHISTPQSGKIESRELLQQRFQDLQQQVQSHEVLDKPEFWGG YRLQPDYYEFWQGRPNRLHDRLSYEKIDGQWTLHRLMP >gi|333032602|gb|GL891824.1| GENE 48 54478 - 55815 1582 445 aa, chain - ## HITS:1 COG:YPO3500 KEGG:ns NR:ns ## COG: YPO3500 COG1109 # Protein_GI_number: 16123646 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Yersinia pestis # 3 440 6 444 446 493 57.0 1e-139 MSYFGTDGIRGKFGQMPITPEFALKLGFAAGKVLKRTSPKNKPLVVLGKDTRLSGYILES ALQAGLNAAGVYVHLLGPLPTPAIAHLTRALHAHAGIVISASHNPYFDNGIKFFSSEGKK LPDSLQEEINKELEKDLFIEDTANLGKSVRVTDANGRYIEFCKSTFPYHFDLNNLKIVVD CAHGAAYSVGPSVFRELGAKVVALYNEPDGLNINENCGSTHPESLQKAVVEYGADLGIAF DGDADRVVMVDKFGNLIDGDHILYILATQAKNKPAGVVGTVMSNMALEVALEKANVGFVR AKVGDRYVLQALEENGWVTGGEPSGHILTLDKSTTGDAIIAALQVLTVMVEQNKALHELV NGFKLYPQVLVNVRLEQMLDPYSIPALVAEFNKAEEQLKGRGRILIRKSGTEPVIRVMVE GDNEQEVKTLAEHLANAVRSQAQVA >gi|333032602|gb|GL891824.1| GENE 49 55965 - 57431 2040 488 aa, chain - ## HITS:1 COG:RSc1429_3 KEGG:ns NR:ns ## COG: RSc1429_3 COG0516 # Protein_GI_number: 17546148 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Ralstonia solanacearum # 199 487 1 289 290 369 67.0 1e-102 MLTIVQEALTFDDVLLLPAYSTVLPKDVSLKTRLTRGIYLNIPLVSAAMDTVTESRMAIA MAQNGGIGILHKNMDIAAQAAEVRRVKKFEAGMVKDPITVSPETTVRELIAITSANNISG VPVVKDGKVVGIVTGRDTRFETNLEQPVSNIMTGQDRLVTVREGESKENIQALLQKHRIE KVLVVGESNELKGLITVTDFRKAESYPNSCKDDLGRLRVGAAVGTGADTPSRVEALVEAG VDVIVVDTAHGHSAGVIERVRWVKQNFPQVQVIGGNIATGDAALALLDAGADAVKVGIGP GSICTTRIVAGIGMPQISAIDSVASALKDQIPLIADGGIRFSGDMAKAIGAGASTIMVGS LLAGTEEAPGEVEFFQGRYYKAYRGMGSLGAMAGATGSADRYFQDSKAGAEKLVPEGIEG RVPYKGPMGNIVHQMMGGLRSSMGYTGSAVIEDLRQNAKFVKITSAGMSESHVHDVTITK EAPNYRVG >gi|333032602|gb|GL891824.1| GENE 50 57567 - 57932 260 121 aa, chain - ## HITS:1 COG:STM1733 KEGG:ns NR:ns ## COG: STM1733 COG0727 # Protein_GI_number: 16765077 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Salmonella typhimurium LT2 # 9 103 5 109 134 99 49.0 1e-21 MLSQVATPDECLRCGACCAHFRVSFYWAEAELMEEHLVEPLTPVYSCMRGTNQPEPRCQA LTGEIGKEVGCSIYAVRSSTCREVQIADEQCNKARLAHQLIPLIQVSPADSENDHDYDQV S >gi|333032602|gb|GL891824.1| GENE 51 58024 - 58821 688 265 aa, chain - ## HITS:1 COG:PA4348 KEGG:ns NR:ns ## COG: PA4348 COG0426 # Protein_GI_number: 15599544 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Pseudomonas aeruginosa # 10 264 7 260 261 342 59.0 4e-94 MGFEKTTSQILFDNGVHKCISFTSLVKGEGIQANQFLIIDHERAAVIDPGGDLTYVPLTM ELNKYTRLKNLDYVMASHQDPDIITSMPRWLVYTDAKVVASKLWARFLPHLNSSFMSERM KGNWEDRLIELPDRGQVIQLGESKLVIVPAHFLHSVGNFQFYDPVAKILFSGDMGASIVD DASQPLKDFDSHVMKMKAFHQRYMCSNKVIRLWVNMVRQMDIEMIFPQHGSPFIGKEMIN QFLDWIETLPCGVDLMTEQIFSCPT >gi|333032602|gb|GL891824.1| GENE 52 59049 - 61205 2336 718 aa, chain + ## HITS:1 COG:AGpA446 KEGG:ns NR:ns ## COG: AGpA446 COG1629 # Protein_GI_number: 16119538 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 31 718 91 785 785 287 30.0 5e-77 MTQRFAFSTSKTLLAVAIFTSMTTSHAEETAEQQNSTNVLPTISIQAQKENPTSYVATKA NSALKSDAPLFKTAQSVSVVTREQLDQKQARTLADALEGVAGVEAGKLGRRGWDDFIIRG QTSSDSVYVDGLRVGQNTYVATELSGMDQVQILKGPASINFGLVAPGGMVNLVTKRPEAE SFARASMTYGSYSLKEGTFDLNYSPNNSEKGAFRLNGRISDQDDPTDYVYFKNFYISPSY NFDLGDNTDLSVIASYQHREYIRQQGLPVIGTLKDNPNGPIDRSLYIGDPNFGKYEADVY RTGYTFKHTFDNGWNFNQNFAVQKTKMDGKAVFARTGSNFWAKDKQGEIDYTTISRRNNS RHQVIDNLSFAIDNRLNKQFDLYGMQHDINIGVDAFQEKSDYTNDKYDIGDLNIYNPIYG QNVTLKQNVRDINRLKYLGLYLRDRIQLNDQLLLSLSGRQDWAQTQTTSLVTGNASKQSD NAFTGSASVMYTLNDIVAPYVSYATSFTPNSGTDVNSNPFKPEKGKQVEVGMKLQSPDQR IQGAIAWYDLKRQNVLVTDTANSGYKVQRGEQLTRGIETELSAEILEGLKLTAAYTYTID AEISKDANASNVGKALDNIPEHAYSLSARYKFDPSSKLGWYVGGGFRGETYKTVDGLDVH VPGYTVFDTEAGYDAERWGAQLAIRNLFDKDYYAGALNENLVTLGNPRQINFTVKFNY >gi|333032602|gb|GL891824.1| GENE 53 61265 - 61840 595 191 aa, chain - ## HITS:1 COG:RSc2100 KEGG:ns NR:ns ## COG: RSc2100 COG2119 # Protein_GI_number: 17546819 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 1 186 15 200 204 201 56.0 8e-52 MQEFLISTSIVALAEMGDKTQLLALLLSARFRKPIPILIAILLATLINHGISAVLGQWIT TVLSPAILVWVLAVGFIGMAFWMLIPDELDDETASINKWQKFGVFGATFILFFLAEIGDK TQIATVALAARYDSIFWVMLGTTLGMMIANAPAVFIGNKLAERLSIALIHKIGAAIFFIV GVSTLVQHYFF >gi|333032602|gb|GL891824.1| GENE 54 62089 - 62361 314 90 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03523 NR:ns ## KEGG: ACICU_03523 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 90 1 90 90 112 100.0 5e-24 MLGFLKIMLPLLLVVFLLMGIWVSILHFPWEWMTYVVMGIEVFVATLILPLEYQTGTSSS HIGFISISACLAVLLGIARLFVWTWVKFFA >gi|333032602|gb|GL891824.1| GENE 55 62510 - 64489 2602 659 aa, chain - ## HITS:1 COG:PM0894 KEGG:ns NR:ns ## COG: PM0894 COG0508 # Protein_GI_number: 15602759 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Pasteurella multocida # 2 659 4 632 632 412 44.0 1e-114 MQIKTPDIGVDKANVAEILVKVGDRVEVDDSIVVLESDKATVEVPSTSAGVVKSILINQG DDVTEGVALIEIEAEGAAQAAPEPTPAPAAEKPAAPAPAQQTQASAQPAATSSATVEVTV PDIGVEKALVGEILVKVGDQIDVEQSIVVVESDKATVEVPSSVAGTVESIQVKEGDTVKE GVVLIQVKTAAASNAQAEAPATTPAPAAVAEPVAAKQETVAAAPAQSGSVDINVPDLGVD KAVVAEILVQVGDKVDVDQSLVVVESDKATVEVPSTVAGVVKAIHLQAGQQVSQGVLLAT IEAEGQAPAAAPAAKAEAAPAPQAAAPKAAAPIATQSAPAAPTSGTDKLTKEQEAENAKV YAGPAVRKLARELGVILSQVKTSGEHGRVVKEDIFAYVKSRLTAPQAAPVAQATAAPAGL PSLPDFTAFGGGEVKPMTRLQQVSVPQLSLNNYIPQVTQFDLADITELEAWRGELKDGFK KQGVSLTILAFIAKAVAHLLKEEPYFAGHLADDQKSVLLRNEIHMGIAVATPDGLTVPVL RNPDQKSIKQIAVELGDLSKKARDKKLTPKDLQGANFTITSLGSIGGTAFTPLVNWPQVA ILGISPATMQPVWNGKDFDPRLMLPLSLSYDHRVINGADAARFTNKLTKLLKDIRTLLI >gi|333032602|gb|GL891824.1| GENE 56 64492 - 67209 3582 905 aa, chain - ## HITS:1 COG:PA5015 KEGG:ns NR:ns ## COG: PA5015 COG2609 # Protein_GI_number: 15600208 # Func_class: C Energy production and conversion # Function: Pyruvate dehydrogenase complex, dehydrogenase (E1) component # Organism: Pseudomonas aeruginosa # 6 878 3 876 882 1132 61.0 0 MAFYGDSDAQETQEWQDAFDSVLQHMGTERAAFLLEKLYQQAIAKHVPIQRLNTPYLNTI SVEEQPAMPGDQDMERRIRALIRWNALAMVLRANKTGDDLGGHLASFASSATLYDVGFNH FFRANSDNFGGDMIYYQGHCAPGIYARSFLEGRLTEEQLSNFRREVGGNGLPSYPHPYLM PDYWQFPTVSMGLGPIMSIYQAHIQKYLMNRGLIKEEDRKVWAYLGDGEMDEPESLGAIS LAGREKLDNLIWVVNCNLQRLDGPVRGNGKIIQELESIFRGAGWRVIKVVWGRHWDPLLA KDTSGALKARMEEAVDGDYQRYQVKGGAYTREKFFGKYPEAAELVKDLSDEDIDNLNRGG HDPYKVFAAYAEAMKAKGQPTVILAKTIKGYGLSEEIEAVNKTHQIKKMQIDSLRYVRDR FNLPFTDEQLEELPFYRPSENSPEMKYMKARREALGGYLPARRRESESLAIPDLSVFDAV LKGSGGKEQSTTMVMVRLIAALLKEKAIKDRVVPIVPDEARTFGLEGMFRQLGIYAAHGQ KYTPEDQEQLMHYREAKDGHMLQEGINEAGAMSAWAALATSYSTNNLPMIPMYMYYSMFG FQRIGDIAWAAGDAQAQGFLLGATAGRTTLNGEGLQHQDGHSHILANTIPNCVSYDPCFG YELAVIVHDGLQRMYVNQERVFYYLTVMNENYEHPAMPEGVEEGIKRGMYLFEKDEKATV QLLGSGVILREVIKAAKILRDEYQIHSNVWSVTSFNELARDGMACEEYNRLHPLAEEVKE SWVSKQLRGTEGIVVSATDHMRAYSEQIRAYLPDGRPFVALGTDGYGRSDTRANLRSFFG VDAAHIVVATLKKLADEGEVDARLVKDAISNFELDTDRPVAWAPQAHPEVQPVAEYNETQ TGEGN >gi|333032602|gb|GL891824.1| GENE 57 67460 - 68152 785 230 aa, chain - ## HITS:1 COG:aq_1753 KEGG:ns NR:ns ## COG: aq_1753 COG0739 # Protein_GI_number: 15606820 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Aquifex aeolicus # 113 226 73 186 187 118 52.0 1e-26 MHTRRILLAFSLAASAASVAFADYQNINQSTDSDRLEQLSKTLSQGSYTHPDDLDLPASA KVSVTLREKTVELNNDSLAKKYGTTTAKNSFKTSSSNPYSWLVSHPLPDTVRVSSNFGGR TMGGRAEHHGGLDMAAPSGTPIYATGPGIVTKSGWGTGYGQYVEINHGNGYLTRYAHASR LMVRVGDQVSAGDHIANVGCTGRCTGPHLHYEVVKDGQRKNPSTYLAMLP >gi|333032602|gb|GL891824.1| GENE 58 68260 - 68700 310 146 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03527 NR:ns ## KEGG: ACICU_03527 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 146 1 146 154 241 100.0 6e-63 MSKPDNVFQQTGKHIKTGNLTFLTTQVAQWQRLTKIIQPLLPQPEQWQVVCYQNGSLIIT GENQAMISQLSYLQSQYVSKLSQLEGLKDLQRIQVRLRNKTIPVTTSSEPSKSIPPETQE MLRSAADFVSDPKLSQALLRLASNKK >gi|333032602|gb|GL891824.1| GENE 59 68798 - 69700 1003 300 aa, chain - ## HITS:1 COG:PA4406 KEGG:ns NR:ns ## COG: PA4406 COG0774 # Protein_GI_number: 15599602 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-acyl-N-acetylglucosamine deacetylase # Organism: Pseudomonas aeruginosa # 1 297 1 297 303 369 58.0 1e-102 MVKQRTLNRVVKASGIGLHSGQKVMINFIPHTVDGGIVFRRIDLDPPVDIPANALLIQEA FMCSNLVTGDIKVGTIEHVMSAIAGLGIDNLIVEVSASEVPIMDGSAGPFIYLLMQGGLR EQDAPKKFIKILKPVEALIDDKKAIFSPHNGFQLNFTIDFDHPAFAKEYQSATIDFSTET FVYEVSEARTFGFMKDLDYLKANNLALGASLDNAIGVDDTGVVNEEGLRFADEFVRHKIL DAVGDLYLLGHQIIAKFDGYKSGHALNNQLLRNVQSDPSNYEIVTFDDEKDCPIPYVSVT >gi|333032602|gb|GL891824.1| GENE 60 69811 - 70986 1502 391 aa, chain - ## HITS:1 COG:RC1015 KEGG:ns NR:ns ## COG: RC1015 COG0206 # Protein_GI_number: 15892938 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Rickettsia conorii # 21 370 18 374 452 287 48.0 3e-77 MASFEFIEDELNDGNGQARFTVFGVGGGGGNAVQHMVQSDIQGVKFVCANTDKQALDCMN APFKIQLGEQSTRGLGAGANPEVGQVAAEESREIIRQHLEGTDMVFVTAGMGGGTGTGAA PVVAEVAKEMGILTVGVVTTPFNFEGRRRQKSAERGIEALEAHVDSLIIIPNQRLLSVYG DISMKDAYKKADDVLLNAVRSIFDLVVNRGHINLDFADLKTAMSTRGYAMMGAGLGRGED RARQAAEQAIRSPLLDNVNIINAKGVLINITGGDDITLRETEIITDVVNQIVDLDEGEIF YGTVFDPDARDELRVTVIATGLTRNAADAEPRKRNTVSHTSTQSAQSVDEDDVPAINKRQ NAENDVNNAPSSTPRSSPMSIQDYLKNQQRK >gi|333032602|gb|GL891824.1| GENE 61 71151 - 72413 1372 420 aa, chain - ## HITS:1 COG:XF0801 KEGG:ns NR:ns ## COG: XF0801 COG0849 # Protein_GI_number: 15837403 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell division # Organism: Xylella fastidiosa 9a5c # 8 385 10 384 411 216 36.0 5e-56 MSEAVPSVVAIDIGTHKVSVLIGKIHAPDNIQVIGMATARNRGMNKGKIVSLDKVIAAIK NAVAEAENMAECRIHSAWVSIPSTELQSFYASGRTPVANPAHVITTNEVVRALELAKASH VTSDYYLASAVPLGFELGDSSEWVQNPINMTAHSMTGHYQLMMMPIATMQNLDRAMKGAN IGVEKMVVSCLATAEASLLKDEKEYGVCLVDIGAGITNLAVYLDGRLALARTLQRGGEHV TRDIAAVLQTTTEEAERIKILHGCVDLSAVKPDHMIQVQGIDGPQTISRIELAEIIIARY EEIFSQIREELEQSGAIHGLYHGVVLTGDACQIEGMVSLARRMLGVSAHLGNPPLQVYAD DQHQAALRRSMYATAAGLLMFSQSELQEAVEEPEEGNDRSVWERMVNGWNAFNSKLKAIF >gi|333032602|gb|GL891824.1| GENE 62 72474 - 73328 681 284 aa, chain - ## HITS:1 COG:PA4409 KEGG:ns NR:ns ## COG: PA4409 COG1589 # Protein_GI_number: 15599605 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division septal protein # Organism: Pseudomonas aeruginosa # 43 263 54 280 287 110 29.0 2e-24 MAQLPASMRRKRAAITSIHEKPPTRKQKLANAGGWVLLVIAFLVLAVGIYGLYKVITDAT VAKLEVVGSTTPVETQQVMRYVQPIVKDNYFTSDLEQIRDKALEISWVDRVVVSRAWPNG IRVRVMPRHAIARWGTGRLLSDGGDVFSEAEPRLHPELPLLHGPVSQSKMMMRRYNEINQ LFHPVNLRLKELYLTERMTWFMQFDSGLRIIVDQDQTMNKLQRLSHLAQSDLKPVWTKIS AIDLRYRNGLSIQWKNATPPKIVNGQFVVTSDDTSIAGGTKAKP >gi|333032602|gb|GL891824.1| GENE 63 73331 - 74257 1056 308 aa, chain - ## HITS:1 COG:PA4410 KEGG:ns NR:ns ## COG: PA4410 COG1181 # Protein_GI_number: 15599606 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Pseudomonas aeruginosa # 7 306 18 317 319 314 52.0 1e-85 MSNATKFGKVAVLLGGKSAERAVSLDSGQAVLDALLRSGVQAEAFDPQDRSVTELVNYDR AFIVLHGRGGEDGQIQGVLEWLNIPYTGTGVQGSAIGMDKVKTKQIWQGSDLPTAPYRII TKETDLDSVIAELGLPVIIKPVHEGSSVGMSKVEKAEDFAAAIEKATQHDAVVMAEKWIT GREFTISFLNGQPLPVIRLQPPADVAFYDYEAKYQRNDVEYGIPCGLSETEEKKLQALCL RAFQAVGAEGWGRIDAMQDEQGNFWLLEVNTVPGMTSHSLVPKAAKAVGYSFDELCVAIL EQTLEGTA >gi|333032602|gb|GL891824.1| GENE 64 74295 - 75743 1838 482 aa, chain - ## HITS:1 COG:PA4411 KEGG:ns NR:ns ## COG: PA4411 COG0773 # Protein_GI_number: 15599607 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Pseudomonas aeruginosa # 26 480 19 472 480 604 63.0 1e-173 MSPTTAANQAKKLIKVPEMRRIKHIHFVGIGGAGMCGIAEVLANQGYKISGSDIKASKTT QQLEENGIKVYIGHEAENIKNANVLVVSTAIDPENPEVKAAIEQRVPIVRRAEMLGELMR YRHGIAVAGAHGKTTTTSLLTTMLAEENLDPTYVIGGLLNSTGVNAALGESRFIVAEADE SDASFLYLQPMAAIVTNIDADHMDTYEGSFDKLKDTFVQFLHNLPFYGLAVVCGDDANIR EILPRVGRPVITYGFNEDNDIRAIDVEQDGMRSHFTVLRKGREPLRLTINQPGLHNVLNA LAAIGVATDEGVSDEAISRALKGFSGVGRRFQVQGEFELGEGNVKLVDDYGHHPKEVEAT IKAARQSHPDRRLVMLFQPHRYSRTRDCFDDFIEVLSQVDQLLLLEVYPAGEKPIVGADS RTLARSIRLRGQVEPILIDPVEGNLQNIMQSVLQPNDLLLTQGAGNVGAISVELAQHHLY VK >gi|333032602|gb|GL891824.1| GENE 65 75755 - 76852 1136 365 aa, chain - ## HITS:1 COG:PA4412 KEGG:ns NR:ns ## COG: PA4412 COG0707 # Protein_GI_number: 15599608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Pseudomonas aeruginosa # 11 360 4 349 357 315 50.0 9e-86 MTDSQQSKPKHVMMMAAGTGGHVFPALAVAKQLQQQGCQVSWLATPTGMENRLLKDQNIP IYQIDIQGVRGNGVIRKLAAPFKILKATFSAMRYMKQLKVDAVAGFGGYVAGPGGLAARL LGIPVLIHEQNAVAGFTNAQLSRVAKVVCEAFPNTFPASEKVVTTGNPVRREITDILSPK WRYDEREQAGKPLNILIVGGSLGAKALNERLPPALKQLEVPLNIFHQCGQQQVEATQALY ADAPANLTVQVLPFIEDMAKAYSEADLIICRAGALTVTEVATAGVAAVFVPLPIAVDDHQ TANAKFLADVGAAKICQQSTMTPEVLNQLFTTLMNRQLLTEMAVKARQHAQPNATQHVVD LIQKM >gi|333032602|gb|GL891824.1| GENE 66 77090 - 78040 364 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|54303152|ref|YP_133145.1| glutathione synthetase [Photobacterium profundum SS9] # 1 311 3 320 346 144 30 1e-33 MSMRVLVVMDPIETVNLKKDSTMAMLWAASRRGHELGYALQQDLYIDQGKAYGLISPLKV FEDYNHYYELGEKKKESIAAYDVVLMRKDPPFDMNFVYTTYVLEQAEREGSWIINKPQSL RDCNEKLFATQFPELQVPTLVTSQQSLIREFITEHGDVIVKPLDGMGGMGIFRLYQDGVN IGSTLEMLTELGTRPIMAQRYIPEIVEGDKRILMVNGEPIPYCLARIPQNGEVRGNLAAG GLGQARPLTENDKLIAAKVGPFLREKGLVFVGLDVIGNYVTEINVTSPTCIREIDAQFGT SIADDLFDVLEAGRPA >gi|333032602|gb|GL891824.1| GENE 67 78195 - 78407 259 70 aa, chain + ## HITS:1 COG:BMEII0414 KEGG:ns NR:ns ## COG: BMEII0414 COG5515 # Protein_GI_number: 17988759 # Func_class: S Function unknown # Function: Uncharacterized conserved small protein # Organism: Brucella melitensis # 1 62 1 65 68 74 52.0 3e-14 MKLYRYLTGPDDSAFCARVTKALNHGWELYEAPTMTFNGSQVIVGQAICKTIDKNYDPEM DILDVLKNNA >gi|333032602|gb|GL891824.1| GENE 68 78637 - 80826 2033 729 aa, chain + ## HITS:1 COG:NMB0293 KEGG:ns NR:ns ## COG: NMB0293 COG1629 # Protein_GI_number: 15676215 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 11 729 1 703 703 602 45.0 1e-171 MLRISISSPQIKGSFPLSLLSLMILNIQGANAEELIEFSSKAAATMPTIKIEAMSELDPI KSYIDYDKANVTRNGLDKKDIPQTVDTIDVQKYKIYGSNDLSVMLQGTPGVSTSYDMRGD GITIRGFGADTGDIYRDGIRESGQVRRSTANIERIEILKGPASVLYGRSAGGGVVNMVSK FANFDSKSSVGAYAGSYDNYGTTADINQVLNDNLAVRLTGEYGEAGSFRSGIENKIEMFS PSFTYKNDDGKLTWTTQYTYDKLNRVPDRGPTRDNLPAGTSIKMGFAQDGDYVDDILQVV RTDVNYEYAPDWNFHWAASYRQAEQNFDHFYFGNYCGLDGKNSKNEACTKKGYIDQIYYW QQTSNKTTTNTFDIKGKFKTGQLEHQIMVGTDWTYEQREPRLANKTQNGSAIYGYVNPIT GEREYSRGNGPLKISQHNYNEGTTYGVFIQDLIGLNDQLKLMMGLRYDYFDFSTTNKIKN EHRNVKDSTFSPNVGLVWQPVPEHSFYTSYSKSFAPFGGQMGVNQVTGSTDVAKMDKEPQ YNEQYEVGVKSEWFDNRLNTQFSVFDIRKNNIRYKPNPDSEPEVWATAGQHQSRGLEFSF IGRVLDNVFVRGGYGYTDAKVKEDNQNPEREGNYLANTSKNTGNLFVRYLPTEQWYTEVG VTYVGSYYSNINNQVKMEGFNRVDAAIGYSADPWNVTLAVNNLTNKEYWRSDSMPGTPRN VLLRLNYQF >gi|333032602|gb|GL891824.1| GENE 69 80876 - 81526 956 216 aa, chain - ## HITS:1 COG:pyrE KEGG:ns NR:ns ## COG: pyrE COG0461 # Protein_GI_number: 16131513 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Escherichia coli K12 # 8 216 4 213 213 242 59.0 4e-64 MTTPVSFHPQAFIELALSRGVLKFGEFTLKSGRVSPYFFNAGLLNDGEALSLLAQGYADK LTQCENVDVIFGPAYKGIPFVAATAVALSQTHNKSVPWGFNRKEAKDHGEGGVLVGAAVE GKKVWIIDDVITAGTAIREVVTILKNAGATIAGVLVALDRQERGQGELSAIQEVQKELEI PVHALITMKDLMDYLEAKGEKEALANMQAYREKYGI >gi|333032602|gb|GL891824.1| GENE 70 81565 - 82389 805 274 aa, chain + ## HITS:1 COG:RSc0140 KEGG:ns NR:ns ## COG: RSc0140 COG0708 # Protein_GI_number: 17544859 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 13 270 1 255 261 241 45.0 9e-64 MIPKDQYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWTEKF RPEGWHTHLFPAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVH IASLYLPSGSSGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSG NQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHA CSPDWKARTVNAWVYKDQWFSDHAPVIIDYKIQE >gi|333032602|gb|GL891824.1| GENE 71 82845 - 83195 363 116 aa, chain + ## HITS:1 COG:SMc00386 KEGG:ns NR:ns ## COG: SMc00386 COG1393 # Protein_GI_number: 15964059 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Sinorhizobium meliloti # 2 112 3 111 116 106 48.0 9e-24 MLKIYGIKNCNSMKKAFDALQAKGLSYEFHDYKKQGIDADTLKIWLKEIGQDTVLNKKGT TWKKLSEKEQTRALSSEDHLIEALIAQPSLIKRPVLQTSKGFLVGFDETAYQNLSA >gi|333032602|gb|GL891824.1| GENE 72 83233 - 83670 429 145 aa, chain - ## HITS:1 COG:RSc2798 KEGG:ns NR:ns ## COG: RSc2798 COG4731 # Protein_GI_number: 17547517 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 28 143 35 150 152 109 47.0 1e-24 MKKIALALGLVGMAAFANAADPLNGTVWKTIDDQTNKPKAVVKFTEQKDGTLTATIQNIL TPGEENACTKCEGPYKNKPLKGVTIVHNLKNVGGNSYENGTILDPKSGKTYKLKGELAEG GKKLKLRGYIGVSALGRNQTWIRAN >gi|333032602|gb|GL891824.1| GENE 73 83820 - 84731 901 303 aa, chain + ## HITS:1 COG:RSc0439 KEGG:ns NR:ns ## COG: RSc0439 COG0657 # Protein_GI_number: 17545158 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Ralstonia solanacearum # 17 290 13 294 317 159 34.0 8e-39 MNIPNVLKYYFTETFLKTAIRKPSQLNLPPTALRPMLEQLCRAFPKQKNVTVRPIRLAGI KGEEIKAQDSATQLIFHIHGGAFFLGSLKTHHAFMTDLAARTQMQIIHVDYPLAPEHPYP EATEALYDVYQSLLVQGIQPKDIILSGDSCGANLALALCLRLKEQPELMPSGLILLSPFL DLTLTSESLRFNQKHDALLSLEALQIGIQHYIGNHIAADDPRVSPIFDNLEGLPPTLVQV GSKEILLDDAKRFREKAEEAGVKVHFKLYTGMWHNFQMFNAWFEEAKQAMADIAEFAHEL DKT >gi|333032602|gb|GL891824.1| GENE 74 84952 - 85359 405 135 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0139 NR:ns ## KEGG: ABAYE0139 # Name: not_defined # Def: GGDEF domain-containing protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 135 16 150 397 242 98.0 4e-63 MILDFIHHNHIINWTPLQKSALMLTLACAMNFSWILWKGYILITPSIWQWANLSLVESQI WLNLLTLFLLAVLIIPCYRYKDQAWAQKIVPLISVQAFMLMLCHDGYLIGSISPATMVGY VGTIGVGLVLFERKM Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:28:10 2011 Seq name: gi|333032601|gb|GL891825.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld14, whole genome shotgun sequence Length of sequence - 80060 bp Number of predicted genes - 72, with homology - 71 Number of transcription units - 47, operones - 10 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 69 - 128 5.2 1 1 Tu 1 . + CDS 181 - 1518 1278 ## COG2851 H+/citrate symporter + Term 1529 - 1579 12.3 - Term 1525 - 1560 6.0 2 2 Tu 1 . - CDS 1592 - 2104 604 ## ABBFA_002606 hypothetical protein - Prom 2289 - 2348 4.9 3 3 Tu 1 . + CDS 2326 - 2874 470 ## COG3644 Uncharacterized protein conserved in bacteria + Term 2889 - 2915 -0.3 - Term 2877 - 2902 -0.5 4 4 Op 1 18/0.000 - CDS 2927 - 4540 2055 ## COG2895 GTPases - Sulfate adenylate transferase subunit 1 5 4 Op 2 . - CDS 4571 - 5479 1123 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes - Prom 5634 - 5693 4.9 - Term 5793 - 5847 6.3 6 5 Tu 1 . - CDS 5862 - 7304 1740 ## ACICU_00960 hypothetical protein - Prom 7400 - 7459 7.4 - Term 7432 - 7481 3.2 7 6 Tu 1 . - CDS 7494 - 9056 2064 ## COG1190 Lysyl-tRNA synthetase (class II) - Prom 9195 - 9254 9.7 + Prom 9148 - 9207 7.8 8 7 Tu 1 . + CDS 9280 - 9768 453 ## ABBFA_002613 hypothetical protein - Term 9673 - 9701 -0.9 9 8 Tu 1 . - CDS 9838 - 10275 597 ## ACICU_00957 hypothetical protein - Prom 10338 - 10397 6.7 10 9 Tu 1 5/0.167 + CDS 10719 - 10883 217 ## COG1773 Rubredoxin + Term 10899 - 10929 0.3 + Prom 10897 - 10956 8.5 11 10 Op 1 . + CDS 10976 - 12157 1619 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 12 10 Op 2 4/0.167 + CDS 12212 - 13156 919 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 13 10 Op 3 . + CDS 13163 - 14071 809 ## COG0583 Transcriptional regulator + Term 14077 - 14104 0.1 - Term 14065 - 14092 0.1 14 11 Tu 1 . - CDS 14101 - 14691 573 ## ACICU_00952 hypothetical protein - Prom 14850 - 14909 9.4 - Term 14884 - 14912 2.3 15 12 Tu 1 . - CDS 14931 - 17009 2213 ## COG0855 Polyphosphate kinase - Prom 17036 - 17095 5.2 16 13 Tu 1 . - CDS 17114 - 17791 594 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 17966 - 18025 3.8 17 14 Tu 1 . + CDS 17868 - 18677 683 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) - Term 18529 - 18572 1.0 18 15 Op 1 11/0.056 - CDS 18679 - 21138 1763 ## COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component 19 15 Op 2 . - CDS 21142 - 21834 345 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 21854 - 21913 1.7 + Prom 21713 - 21772 6.2 20 16 Tu 1 . + CDS 21942 - 22502 492 ## COG2755 Lysophospholipase L1 and related esterases + Term 22683 - 22718 -1.0 - Term 22474 - 22512 7.9 21 17 Tu 1 . - CDS 22535 - 23149 698 ## COG0288 Carbonic anhydrase - Prom 23213 - 23272 6.5 + Prom 23202 - 23261 7.7 22 18 Op 1 . + CDS 23434 - 24459 919 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 23 18 Op 2 . + CDS 24486 - 25493 846 ## ACICU_00943 hypothetical protein - Term 25459 - 25511 12.3 24 19 Tu 1 . - CDS 25516 - 27780 2387 ## COG4771 Outer membrane receptor for ferrienterochelin and colicins - Prom 27862 - 27921 13.9 - Term 27887 - 27927 6.9 25 20 Tu 1 . - CDS 27950 - 28588 849 ## COG0694 Thioredoxin-like proteins and domains - Prom 28609 - 28668 7.2 + Prom 28659 - 28718 3.5 26 21 Tu 1 . + CDS 28746 - 29363 511 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) + Term 29376 - 29414 7.9 + Prom 29447 - 29506 5.2 27 22 Op 1 3/0.167 + CDS 29534 - 31210 1841 ## COG3119 Arylsulfatase A and related enzymes 28 22 Op 2 . + CDS 31207 - 32214 777 ## COG1262 Uncharacterized conserved protein + Prom 32222 - 32281 6.0 29 23 Tu 1 . + CDS 32324 - 32488 109 ## ACICU_00937 hypothetical protein + Prom 32887 - 32946 9.0 30 24 Tu 1 . + CDS 33025 - 34572 1423 ## ACICU_00936 hypothetical protein + Term 34580 - 34618 4.8 - Term 34572 - 34603 2.7 31 25 Tu 1 . - CDS 34616 - 35950 1197 ## COG3048 D-serine dehydratase - Prom 36024 - 36083 6.0 - Term 36068 - 36097 2.1 32 26 Tu 1 . - CDS 36117 - 37748 1251 ## COG0306 Phosphate/sulphate permeases - Prom 37957 - 38016 8.9 33 27 Tu 1 . + CDS 38210 - 41896 4236 ## COG1410 Methionine synthase I, cobalamin-binding domain + Term 41924 - 41963 4.3 - Term 41910 - 41951 8.0 34 28 Op 1 12/0.000 - CDS 41977 - 42981 1185 ## COG3958 Transketolase, C-terminal subunit 35 28 Op 2 . - CDS 42992 - 43837 1118 ## COG3959 Transketolase, N-terminal subunit 36 28 Op 3 9/0.056 - CDS 43857 - 45158 1318 ## COG0477 Permeases of the major facilitator superfamily 37 28 Op 4 . - CDS 45234 - 45983 248 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 46046 - 46105 3.8 + Prom 45977 - 46036 4.3 38 29 Tu 1 . + CDS 46138 - 47043 713 ## COG0583 Transcriptional regulator + Term 47260 - 47299 7.1 39 30 Tu 1 . - CDS 47055 - 47501 222 ## ACICU_00927 hypothetical protein - Prom 47607 - 47666 6.3 + Prom 47605 - 47664 6.9 40 31 Tu 1 . + CDS 47693 - 48838 394 ## PROTEIN SUPPORTED gi|15900011|ref|NP_344615.1| aldose 1-epimerase + Term 48865 - 48916 10.6 - Term 48858 - 48898 6.1 41 32 Tu 1 . - CDS 48906 - 50126 1359 ## COG0477 Permeases of the major facilitator superfamily - Prom 50156 - 50215 4.7 + Prom 50140 - 50199 6.7 42 33 Tu 1 . + CDS 50233 - 51021 725 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 51223 - 51269 2.1 43 34 Tu 1 . - CDS 50988 - 52310 1376 ## COG2066 Glutaminase - Prom 52416 - 52475 6.7 44 35 Tu 1 . - CDS 52489 - 52971 537 ## COG0242 N-formylmethionyl-tRNA deformylase - Prom 53147 - 53206 4.1 + Prom 53021 - 53080 5.2 45 36 Tu 1 . + CDS 53206 - 54504 1199 ## COG0477 Permeases of the major facilitator superfamily + Term 54530 - 54560 1.0 - Term 54510 - 54554 7.1 46 37 Tu 1 . - CDS 54567 - 55763 1270 ## ACICU_00920 hypothetical protein - Prom 55847 - 55906 4.8 - Term 55858 - 55911 1.4 47 38 Op 1 3/0.167 - CDS 55919 - 57559 2080 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 48 38 Op 2 1/0.222 - CDS 57598 - 59064 1778 ## COG1012 NAD-dependent aldehyde dehydrogenases 49 38 Op 3 . - CDS 59078 - 59869 800 ## COG1712 Predicted dinucleotide-utilizing enzyme 50 38 Op 4 3/0.167 - CDS 59885 - 60679 251 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 51 38 Op 5 . - CDS 60695 - 61519 798 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 52 38 Op 6 . - CDS 61555 - 62076 718 ## ABBFA_002659 cupin domain protein 53 38 Op 7 . - CDS 62100 - 63323 1114 ## COG0477 Permeases of the major facilitator superfamily 54 38 Op 8 . - CDS 63366 - 64577 1337 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 55 38 Op 9 6/0.167 - CDS 64607 - 65536 1066 ## COG0346 Lactoylglutathione lyase and related lyases 56 38 Op 10 . - CDS 65548 - 66312 217 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 57 38 Op 11 . - CDS 66305 - 67372 1228 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 58 38 Op 12 . - CDS 67389 - 67688 398 ## ACICU_00908 hypothetical protein 59 38 Op 13 . - CDS 67716 - 68021 320 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases - Prom 68141 - 68200 9.2 + Prom 68189 - 68248 8.0 60 39 Tu 1 . + CDS 68295 - 69107 807 ## COG1414 Transcriptional regulator + Term 69113 - 69141 -1.0 - Term 69099 - 69127 -1.0 61 40 Op 1 . - CDS 69153 - 69452 378 ## ACICU_00905 hypothetical protein 62 40 Op 2 . - CDS 69467 - 70048 618 ## COG3201 Nicotinamide mononucleotide transporter - Prom 70089 - 70148 3.9 + Prom 70211 - 70270 5.2 63 41 Tu 1 . + CDS 70296 - 71084 895 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 71151 - 71179 2.3 - Term 71125 - 71179 12.7 64 42 Op 1 . - CDS 71187 - 71606 351 ## ABBFA_002670 hypothetical protein 65 42 Op 2 6/0.167 - CDS 71689 - 72948 1246 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 66 42 Op 3 . - CDS 72962 - 74956 2083 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 75096 - 75155 9.0 - Term 75051 - 75100 6.0 67 43 Op 1 1/0.222 - CDS 75193 - 75534 562 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 68 43 Op 2 . - CDS 75621 - 76151 673 ## COG4681 Uncharacterized protein conserved in bacteria - Prom 76196 - 76255 7.7 + Prom 76082 - 76141 5.8 69 44 Tu 1 . + CDS 76340 - 77602 1359 ## COG1301 Na+/H+-dicarboxylate symporters + Term 77611 - 77655 9.1 70 45 Tu 1 . - CDS 77640 - 78638 1059 ## COG0523 Putative GTPases (G3E family) - Prom 78700 - 78759 6.3 + Prom 78839 - 78898 8.2 71 46 Tu 1 . + CDS 79137 - 79337 338 ## + Term 79338 - 79384 -0.8 - Term 79404 - 79441 5.1 72 47 Tu 1 . - CDS 79448 - 79963 490 ## COG1607 Acyl-CoA hydrolase - Prom 80000 - 80059 4.3 Predicted protein(s) >gi|333032601|gb|GL891825.1| GENE 1 181 - 1518 1278 445 aa, chain + ## HITS:1 COG:PA5468 KEGG:ns NR:ns ## COG: PA5468 COG2851 # Protein_GI_number: 15600661 # Func_class: C Energy production and conversion # Function: H+/citrate symporter # Organism: Pseudomonas aeruginosa # 1 443 1 433 434 486 64.0 1e-137 MLTLLGVGMILCFMYLIMSKRLSPIIALILIPFIFSLIAWGLGHYFESLSHIELKGLSEM MLDGIKKLAPTGVMLLFAILYFALMIDAGLFDPPVKWILKKVKGDPLKITLGTVFLTTLV SLDGDGSTTYMICVAAMLPLYQRLGMNTLIMTALMLLCSGVMNLTPWGGPTARAASALQV DPSHIFVPMILPMVISIGWLFFLAYLYGRYEQKRLGVIELESHHGDNITVSKDPEATRPH LRKVNMVLTILLMIALIKGILPMSVLFMLAFCIAMLINYPDVDMQKKRIAMHADSILAVV GLIFAAGIFTGILSGTGMVEAMSKEFVAMIPTSMGPYLAPITALVSMPLTFFMSNDAFFY GVLPILAEAASHYGISPEAIARASIVGQPVHLLSPLVPSTYLLCGLAKVDFADHQKFTFK WAFITCMVLMGTALVIGVFPLFSTM >gi|333032601|gb|GL891825.1| GENE 2 1592 - 2104 604 170 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002606 NR:ns ## KEGG: ABBFA_002606 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 170 1 170 170 314 100.0 1e-84 MFEQSPESLSDIEILDILQSMKKDKLDTEANEIIRNGGKAGRQEAHKQALVALNTNFEEK FVEAVTLALGLNAAQAKKIRYKKDRIRILKARGIDYLAVDGAETAQVLAQISQAIVREDA IVTHDLHNIFPFWKEGFPMVQFDNAYKILQEDISLHFHAFLDAMIEYVNK >gi|333032601|gb|GL891825.1| GENE 3 2326 - 2874 470 182 aa, chain + ## HITS:1 COG:DR0045 KEGG:ns NR:ns ## COG: DR0045 COG3644 # Protein_GI_number: 15805086 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 3 173 2 172 192 130 42.0 1e-30 MNTKITYTAFTGSTLIASDSLVELAKKLKALPKTTENILIFNDQTGQQIDLDLSGSEQEL QQRYAEPEEIKKVGRPKLGVISREITLQKKHWDWLDQQSASASAVIRKLIDKELNNPNSE GNIMLAKQAIDRFMSAMLGNMPNYEEATRALYQGDRDIFLKMIQSYPKDVREYLTLKTQN IF >gi|333032601|gb|GL891825.1| GENE 4 2927 - 4540 2055 537 aa, chain - ## HITS:1 COG:PA4442_1 KEGG:ns NR:ns ## COG: PA4442_1 COG2895 # Protein_GI_number: 15599638 # Func_class: P Inorganic ion transport and metabolism # Function: GTPases - Sulfate adenylate transferase subunit 1 # Organism: Pseudomonas aeruginosa # 1 436 1 435 451 593 68.0 1e-169 MSHQSDLISQDILAYLKQHEQKDLLRFLTCGNVDDGKSTLIGRLLYDSKLIYEDQLQAVT RDSKKVGTTGDAPDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRN MATGASTADLAIILIDARYGVQTQTRRHTFIASLLGIKNIVVAINKMDLVEYSSERFNEI QVEYDAFVSQLGDRRPANILFVPISALNGDNVVNPSAHTPWYKGQTLMSILESVEINRES SKHEFRFPVQYVNRPNLDFRGFAGTVALGEIKVGDEIVALPSGKRSTVKEIVTFDGNLEQ AVAGQAVTLTLNDEIDISRGNVLVRAGEQPLISRSVRASVVWMNEHPLVKGKLYNIKIGT QTVPAKVTNINYRVNVNTLEHTQVEELELNAIADVVVEFDAPVVFDRYQDSRYTGSFIFI DRLSNVTVGAGMVEAAVEWTAHSNPVTAEDRAARLGQKPAVIGVSAQLIEKAQALESLLI QQGVVAIAKTSLTAEQLVLLRETGVVIITTSVDGIDTEVTAETIEEAVEKIVELVRL >gi|333032601|gb|GL891825.1| GENE 5 4571 - 5479 1123 302 aa, chain - ## HITS:1 COG:VC2560 KEGG:ns NR:ns ## COG: VC2560 COG0175 # Protein_GI_number: 15642555 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Vibrio cholerae # 1 302 14 315 315 509 80.0 1e-144 MTESRLTHLKQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLALKAFYPAKLPFPL LHVDTGWKFKDMIAFRDNMAKTHGFDLIVHQNKEGREAGINPFDHGSSKYTDIMKTQALK QALDKYQFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNLYNGKVNKGES IRVFPLSNWTELDIWQYIYLENIQIVPLYFSAVRPVVERSGTLIMVDDERMRLKEGEVPQ MKSVRFRTLGCYPLTGAVESEADTLPEIIQEMLLATSSERQGRMIDHDEAGSMEKKKQEG YF >gi|333032601|gb|GL891825.1| GENE 6 5862 - 7304 1740 480 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00960 NR:ns ## KEGG: ACICU_00960 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 480 1 480 480 944 100.0 0 MFLRKTLSIALLATASSAVFAQGLVLNNDDLRTDLNWLNQQGVINISTSTWPLSGDEIQR ALSQAKVTHPAQQKVINSVLNALKADNDTVKVGAFAETDIKNIPQAFGDNQKSQYQGSLE FNAGGENWDAKIRVNAEKDPQIDSGHDVNVEGSYVAGKLWNQWLVAGQIPTWWGPGHDGS LIRGDASRPVYGVTAQRAVQNAFETKWLSWIGPWQYQAFAGQLDDYKAVPHAKLLGLRLT ARPLPYLELGASRTLQWGGEGRSESWDSLWNAIKGNDNVYDSDEDRSNQIAGFDARLNLQ SLINAPVGIYGQYVGEDEAGLLPSKKMYLAGVDYSSSYNNMPYQLYAEWADTRTNNDVKG ISYNHYVYKDGYYQHGFPLGHAMGGDGQMYSVGGDIRFDVMNRLSGRAMVVKVNQSNLAI NKAFPKDDEIKALDLTWTHYIKPDLPLKINGWVSDSDLEGNDAGASIGVEIPLERKMFGF >gi|333032601|gb|GL891825.1| GENE 7 7494 - 9056 2064 520 aa, chain - ## HITS:1 COG:PA3700 KEGG:ns NR:ns ## COG: PA3700 COG1190 # Protein_GI_number: 15598896 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Pseudomonas aeruginosa # 27 516 15 498 501 631 65.0 0 MPLHFYLTEAEMTQQNAQSTSEPTISENDLIAQRHAKLKQIQDVAKETGKSPWPNTFKRE HYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGSFMVIQDMTGRIQLYVDRKGLPK DTLETIKGLDLGDIIAAEGYIGRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKY RKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHH NALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADY KDLMALTENMLEKLAIDILGTTDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGD REFLAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARRNDD NPHITDRFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFVEALE YGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRRKEG >gi|333032601|gb|GL891825.1| GENE 8 9280 - 9768 453 162 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002613 NR:ns ## KEGG: ABBFA_002613 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 162 1 162 162 318 100.0 3e-86 MKILFLHGLDSSRESTKFHAILHPEKFCIDVDYRNLSYASVKDFYHQAIETIKPDLLVGH SLGGYWALKTAAQHKLAVIVANPSLTPNFRNDYPHLCDEDLDHSNPKMAYLELGDEQLDM YQVQEKLSPYMTIETYDGGHHRLAYPSRLNDLITKIHKKYFA >gi|333032601|gb|GL891825.1| GENE 9 9838 - 10275 597 145 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00957 NR:ns ## KEGG: ACICU_00957 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 145 1 145 145 265 100.0 3e-70 METLIYEVEINAPIEKVWDVLWNSETYNAWTKFFAPDSSMRTDWKVGGKTYFLDGEGNGM VSTIEEMKKPEVLIFKHLGMIKDGKEDLESEEVKSWSGSLEKYFLSQNGDTTTVKVELAT LPEYIGMLKSGFVQGFEAVKQMAEK >gi|333032601|gb|GL891825.1| GENE 10 10719 - 10883 217 54 aa, chain + ## HITS:1 COG:PA5351 KEGG:ns NR:ns ## COG: PA5351 COG1773 # Protein_GI_number: 15600544 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Pseudomonas aeruginosa # 1 54 1 54 55 81 75.0 4e-16 MKKYQCIVCGWIYDEAEGWPQDGIAAGTKWEDIPDDWTCPDCGVSKADFEMIEI >gi|333032601|gb|GL891825.1| GENE 11 10976 - 12157 1619 393 aa, chain + ## HITS:1 COG:PA5349 KEGG:ns NR:ns ## COG: PA5349 COG0446 # Protein_GI_number: 15600542 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 3 389 6 383 384 276 42.0 5e-74 MHPIVIIGSGMAGYTLAREFRKLNPEQELVMICADDAVNYAKPTLSNAFAGKKAPEQIPL GDAAKMSAQLNMRIEPFTWVKEILAERHELVLEKDGVISQQSYSKLILAVGANPIRLAIA GDGSDDIHVVNSLIDYRSFRENLAQRKDKRVVILGAGLIGCEFANDLLHSEYDVTVIDLA PQPLGRLLPSHIASAFQQNLEEAGVKFALGTTVEKVSKINNGEDYAVTLANGQTLVADIV LSAIGLQPNISLAQSANIQTSRGVITNSLLETNQADIYAIGDCAEVNGTLLPYVMPIMQQ ARALAKTLSGQQTNVHYPAMPVAVKTPAAPLTVLPAPVDVDVNWETEEFDDGMLAKAIDN EGTLRGFVLLGATAGKQRLTLTKLVPDLIPAQA >gi|333032601|gb|GL891825.1| GENE 12 12212 - 13156 919 314 aa, chain + ## HITS:1 COG:ML1899 KEGG:ns NR:ns ## COG: ML1899 COG0596 # Protein_GI_number: 15828015 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium leprae # 27 313 13 303 304 254 46.0 1e-67 MNSALQFSISPYTPFMQETKVNLGNGIELHVEVGGKPEHPTILLIMGLGAQMLFWPDFFC KSLIDQGFHVIRFDNRDIGLSSKVRHQGKRLNTMKLMGRFALGLRNQGAPYTLYDMADDV SMLLDRLGVSKAHVIGASMGGMIAQILAAKYPEKVEKLGLMFTSNNQPFLPPPFPKQLLS LIGKPESRDEEGIVNHSLKLFQLIGSPGYINHIEAVQTARKLYQRSYYPAGVLQQFLAIL CTGSLLQLDREIKQPTLVLHGSRDRLLPPSHGKAVAKAISGAKFELIDGMGHDIPAHFIP QLSGLFAHHFKSSY >gi|333032601|gb|GL891825.1| GENE 13 13163 - 14071 809 302 aa, chain + ## HITS:1 COG:VC0732 KEGG:ns NR:ns ## COG: VC0732 COG0583 # Protein_GI_number: 15640751 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 1 296 1 300 301 191 39.0 2e-48 MAALPSLRQLSYLVTLSETLHFTEAARRSFVTQSTLSGGIMELERLLGGVLVERDRQNVR LTPLGEQVVARARVLLADAQDLMRLSREMSEPLTGDLHLGVIPTIAPFILTRLLDEVHQQ LPKIQLHLHEAQSEKIVERLEHGNLDMIVLALPFDTRSLKVAEISKENLYLVCSKQDTNA LQANSLDDLDLSRLILLEEGHCLRDHVLSACPIGERKNDNRLKASSLPTLVEMVSSDLGF TLLPEIAIENSMIKFNDQITAKPIEDAPSRTLALVTRKSTPLQSEFDVLLQIMQKITTNL HE >gi|333032601|gb|GL891825.1| GENE 14 14101 - 14691 573 196 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00952 NR:ns ## KEGG: ACICU_00952 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 196 1 196 196 326 100.0 3e-88 MQDFIKSLFIRIFLGLMPVTAYADQKCYGDIIVFQKFDDQMIYPYFIHPSREKNKKNDTP NKTIVIQKRKLTQEELLAQKKIDDNQLKKIEEKKNIEKKKQLDAAVAKEILENGEKKWMV QVALAPNQNKANMIQSQLQAKGYKVVTSATTKGIRVMVDPANDYAIAQIIREKIIADDSL DLRSAWVFKWASLTAQ >gi|333032601|gb|GL891825.1| GENE 15 14931 - 17009 2213 692 aa, chain - ## HITS:1 COG:PA5242 KEGG:ns NR:ns ## COG: PA5242 COG0855 # Protein_GI_number: 15600435 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Pseudomonas aeruginosa # 19 689 53 726 736 841 59.0 0 MNTAITATTPTEYSYNDRYINRELSILDFHLRVLEQAVDPLHPLLERMNFLLIFSRNLDE FFEIRVAGVMEQFALGNESRSPDGLTPRQVLQKISETAHAAIERQYRILNEEILPKLREE DICFLRRGELTPAQSAWVKKYFQEQVAPVLTPISLDPAHPFPRLVNKSLNFIVTLEGKDA FGRQIDLAVVPAPRSLPRVVRLPDELTGGKEHHVMLSAIIHEHVSDLFPGMTATGCYQFR VTRNADLALNEDVEDLAKALKGELSSRRFGRAVRLEVTQNCPQHIYEYLLEEFDLNEEQL YKVDGPVNLARLVSNFKRPHLRYDSHTPVVPKVFKKTESIFSAMQKQDILLHHPFESFAP VIQLLREAARDPQVLAIKQTLYRSGADSEIVQVLAEAARNGKEVTAVIELRARFDEESNI EVANVLQEAGAVVVYGIVGYKTHAKMIMVVRRENNKLVRYVHLGTGNYHAMNARIYTDYG LMTTDKDLCEDVHRIFQELTGMGKMAKLKKLLHAPFTLHAQLINFIDEEIANAKAGRKAQ IIVKVNALTEVQLINKLYEASQAGVQVDLIIRSICCLRPGLPNLSENIRVRSIVGRFLEH TRVYYFSNNGDARIYCSSADWMDRNLFNRVEACFPIEDPALKKRIYQQGLLNYLQDNQQA WLLQGDGTWVRAQPAAGEKLHNAQRELLKTFK >gi|333032601|gb|GL891825.1| GENE 16 17114 - 17791 594 225 aa, chain - ## HITS:1 COG:NMA2130 KEGG:ns NR:ns ## COG: NMA2130 COG0744 # Protein_GI_number: 15795001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Neisseria meningitidis Z2491 # 13 225 13 229 233 179 41.0 3e-45 MKAFIVRVLLIFIGAILLIQLWIFSSLVWWRTHEVDTTMFMRIDYWSDPSEPIIHEWLDY DDISDNFKHAILAGEDAKFIHHHGFDWDGIRFALERNNEQGEVVAGGSTVSQQLAKNLFL YNKRSFIRKGQETVATWMMERMWSKRRILEVYMNSVEFGKNLYGVEAAAQYYYGKSAKSL TREQAAFLAALLPDPKYYQDHRNDRKLQYRKRVILRYMNSTQIPE >gi|333032601|gb|GL891825.1| GENE 17 17868 - 18677 683 269 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 20 220 74 244 284 93 34.0 5e-19 MTQYQPPHINRKLNVQAWWLTALLISINVGLFIWQIISGVDISDPAIKDALHWGADFTPL TFSGQPERLFTSMFFHFGIIHLMLNMWALYIFGNVAEALFGRLYFIGLYLLAGLFGSLLS SYINIQNGHELLQHFDQSLLPHVSAGASGAVMGLGAALTVLSLFPPLPHQAYILDKKSLL MIMAINLIFGLVATGINNAAHVGGMIMGALLALIWYLSYRTPFKTLLKFLGLLGGLLMTV GFYAYCNQLNSPLLPLWHEVLIQNPEILP >gi|333032601|gb|GL891825.1| GENE 18 18679 - 21138 1763 819 aa, chain - ## HITS:1 COG:PA2858 KEGG:ns NR:ns ## COG: PA2858 COG3127 # Protein_GI_number: 15598054 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component # Organism: Pseudomonas aeruginosa # 9 815 14 829 830 338 31.0 2e-92 MRNLLKPLLLQSLRTGGLYLLIIALSLAISATTALKFSNDQVKNAVSLQAAQMLAADLVL SNNEPIDAKWQKRADQLGLKQTNVTMFSSMAHTQDQFVMVNVKAIEPAFPLRGKLEIEPI ARGIQPGEVWLSQRAADLLKVKLGDMVSIADAAFRFSGVIVRDSNQELGFSGFSPTVIIH QADIAKTHAIQTGSRIDYRLLMSGQPEQVQSFSRQFKQQHQPANEQEETIGLRLRDASES NSRLLRPLENLDTFLQLANILTILLCGIAIALTSQRYVQQNQDHIALIRCLGASKFQILW AYIRLLCVVSAISIAIGSLLGIMMGYGLLELMLQLIPQLELSFSVVGFLLGPLPIAIFTS VIVLLGFILPSIWELLNTPPIRVIREQAKSRKSLFFMFFAGITSLVIFSLVLSENLMLSI WVLTAIILLCILLYTVVWLLLRALKKMKTRLSFYIRSASQSALQITALALGLSLITVLSV LRTDLLERWQQQLPEGTPNQFVYGLPPFDLKAFEQQLKQNGWQSTPLYPNIRGRLLAKND VPFSEEAIKQNNALRRELNLTQSSALPNDNVITKGQAEFNAVGQVSVESKTAESLGIQIG DRLTFSLPEGSLQAKVINFRSVEWESFSPNFFFIFSPKTLDENAGSYLGSFYVPKQDQPK MIHMIQQFSNTVFIDVDRILDEVKRLMNVLVKIVTVLAALVGFSGILVLIACLNLLMDER RREVALLRSFGLSKNKMKQMLSLEIGFLGLLAGIVACCFAEVISAIASYKMNMALQWHIE IWLILPLAMMLLCALIGRYRLGYLCNLPPLQSLRELNQI >gi|333032601|gb|GL891825.1| GENE 19 21142 - 21834 345 230 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 222 2 217 223 137 35 2e-31 MPQPIIAAHQVTQTIQINQNQFTILKNIDLDIYEGEQVAITGRSGSGKSTLLGILATLDQ PFEGEVWLCGQAVHKLTEEQRAQIRMQHIGFVFQSFQLLPQLSALENVMLPLRLRKDFDY KIAEKKALDWLHRVGLSRQAEQTPKVLSGGEQQRVAIARALIAEPQIIFADEPTGNLDGQ TAQEIETLLFDLNRELGTTLILVTHDRNLAALCQRHVELDDGRLKTVQGG >gi|333032601|gb|GL891825.1| GENE 20 21942 - 22502 492 186 aa, chain + ## HITS:1 COG:PA2856 KEGG:ns NR:ns ## COG: PA2856 COG2755 # Protein_GI_number: 15598052 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Pseudomonas aeruginosa # 4 186 20 201 201 179 51.0 2e-45 MFVSAKTILILGDSISAGYGIDPKQGWVQLLQKRLDQQYPKQHKVVNASVSGETTSGALA RLPKLLQTYKPEVVVIELGGNDGLRGQPPQMIQKNLSQLIQLSQKQKAKVILFGMKIPPN YGTAYSKAFENSYKTVSQKYQVKLLPFFLDGVAGQKQLMQNDLIHPNTQAQSKLLNLAYP YIKGAL >gi|333032601|gb|GL891825.1| GENE 21 22535 - 23149 698 204 aa, chain - ## HITS:1 COG:all2910 KEGG:ns NR:ns ## COG: all2910 COG0288 # Protein_GI_number: 17230402 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Nostoc sp. PCC 7120 # 5 200 56 240 243 136 38.0 3e-32 MPTAQEVLDRLKAGNQRFVNGNTSLAKTLSHHERAEMAKDQNPFAIVLGCSDSRVPAEMV FDQGLGDLFVIRVAGNVVAPSQVGSVEFAAERYDCPVVVVLGHSHCGAIQATIDTLMNPE HPPSSNLMSIVNRVRPSVEILMQTDLKNDLKKLSCHAVRSNVFASVNQLRHGSAVLENLI AKGELIVVGAEYSLETGEVTFFDF >gi|333032601|gb|GL891825.1| GENE 22 23434 - 24459 919 341 aa, chain + ## HITS:1 COG:PA2949 KEGG:ns NR:ns ## COG: PA2949 COG0596 # Protein_GI_number: 15598145 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 51 334 34 311 315 160 34.0 5e-39 MTRLSAPIKASMKKTATALTLACSLLSVMSISQAQAADNIDVSFQTILQQERNWAGLQSK SLKVGDITWSYSEGGSSTKPTLLLIHGLAGSRDNWNRVAHYLTTNYHVIIPDLPGSGETI VSQDFDYSVPNLAEKLRRFVEAANLKGPIHIAGHSLGGSIALLYAGQYPFETKSLFLVDS GGIFRSANTIYLKDPTYLKQLLVSKKGDFNYLLKQTMFNPPFIPKEFLQAQEKLMINQAP QTQKLVDQLIALNKVYTPDSFAVLTKTIDAPTLILWGKQDKIINVEVANELKRLLKNAQP PVILENVGHMPILEAEQLVIQQYVPFLLKVETNQSSKTTTP >gi|333032601|gb|GL891825.1| GENE 23 24486 - 25493 846 335 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00943 NR:ns ## KEGG: ACICU_00943 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 335 1 335 335 615 100.0 1e-174 MSTQPIIEKLIEAHLDFLDEQFAQAQVIQQEFEQFYHWLGSRQLQHLWTFEQVQQLIQKQ ILDTPASDFLIEQIAEHIRFALIHPANDTATVEDVIPVLTIDRIAQYVASKEEHRKKLIK TIVNNPAFSALLTQLIQQTMHDYLDESMSKRVPGVGRFMKMGKSVLETVTDSNLDDTINH YLQKNILKLSQMSERVLNQHFDNDKLYHFQANVWHKVKTSPLSVLKNYIEVQDLTKTVGL GHEIWDHIRQTDYLKQQVHDGIYTWYVRNQERNFDLLLRDLNIDENLVKHELTELLVPVL QQLVTTGHLRRRARVYLEKFYYSEKALEILNNKGA >gi|333032601|gb|GL891825.1| GENE 24 25516 - 27780 2387 754 aa, chain - ## HITS:1 COG:PA0931 KEGG:ns NR:ns ## COG: PA0931 COG4771 # Protein_GI_number: 15596128 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferrienterochelin and colicins # Organism: Pseudomonas aeruginosa # 46 754 49 742 742 677 52.0 0 MSKRIIQSVLSVSVLASMMSMAFAAQNEQEQAEQTLEKPAEPVKLETIFVTAEEQVKQSL GVSVITKEDLEKLPVRNDISDYVRRMPGVNLTGNSATGQRGNNRQIDIRGMGPENTLILV DGKPINSRNSVRYGWKGERDTRGDSNWVPAEAIESIEVLRGPAAARYGSGAAGGVVNIIT KKVTNETHGSVEFYTSQPEDSKEGSSNRVGFNVSGPLIKDVLSYRLYGNYNKTEADDVDI NKSIGSTAAGREGVKNKDISGRLAWQATDQQTVLLDISSSKQGNIYSGDSQLNANAEADA ILSQLIGKETNTMYRDSYALTHEGDWSWGKSKLVAQYDKTHNKRLPEGLAGSVEGKINNL DDKATSRLETLRFNGEANIPFEYYLPQVLTVGTEWVEDRFKDNVSTTQGKDSSGSGYGDQ LAKGDRSKMESRIASAYIEDNLKVTDSTDVVLGLRFDDHSKSGSNWSPSLNITQKLNDYF TLKGGVAKAYKAPNMYQNAEGYLLSTNGNGCPANIESRCLLQGNGDLKPETSVNKELGIQ FQKDIVNASLTWFRNDYKDKIVAGTHVVGTVDGSSTNANTGAVTNTKWNILRWENTPKAL IQGFEGSLGLDFGDIRWTNNFTYMMDSKDKQTGNPLSLVPIYTINSIFDYDITDQLDVNF VFTQYGRQKSRQFAENRLESGIGSGGANSALKPSTVKSYSTAGINVGYKFSDQISTRVGV SNLFDKQILRDSNSISQTYNEPGRAYYASLKYSF >gi|333032601|gb|GL891825.1| GENE 25 27950 - 28588 849 212 aa, chain - ## HITS:1 COG:PA1847_2 KEGG:ns NR:ns ## COG: PA1847_2 COG0694 # Protein_GI_number: 15597044 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin-like proteins and domains # Organism: Pseudomonas aeruginosa # 113 211 1 95 95 117 60.0 2e-26 MSTENTNTAVAEEIPNLLITPSAQEYLHELLAKQNTPGIGVRIFVEHPGTPRAECCMAYS APEEVVPTDYKQDYPDFPAYIDAPSIPYLLDAVIDYNKDRFGGQLTFRAPNSKVPRVGPD ASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLKFGGGCQGCSAIDVTLK QGVETTLKEHIPELQRVVDQTDHTQAEGAYFK >gi|333032601|gb|GL891825.1| GENE 26 28746 - 29363 511 205 aa, chain + ## HITS:1 COG:XF2186 KEGG:ns NR:ns ## COG: XF2186 COG0705 # Protein_GI_number: 15838777 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Xylella fastidiosa 9a5c # 9 201 7 201 206 195 53.0 5e-50 MLHLPFNHTITLIIITVIVSLLAFSNQNVMNRLIFWPPAMQRGQFDRFITHGFIHADGTH LLFNMITLFFFGSIIESFYRQYFYDMGFVLFYLGGLIFAILPSYLQHKNDANWASLGASG AVSAVLFAYILFQPWKLIFVFFIPVPAIIFAVLYVAYSIWAGKRGNSHINHSAHLWGAAY GVIVTILIEPRVIPHFLDQLTRLPF >gi|333032601|gb|GL891825.1| GENE 27 29534 - 31210 1841 558 aa, chain + ## HITS:1 COG:PA0183 KEGG:ns NR:ns ## COG: PA0183 COG3119 # Protein_GI_number: 15595381 # Func_class: P Inorganic ion transport and metabolism # Function: Arylsulfatase A and related enzymes # Organism: Pseudomonas aeruginosa # 36 554 3 528 536 462 43.0 1e-129 MKYKALLSSLSIALFSLSLAGCNDNDSQETAVSTPKQPNILFIMADDLGYSDLGAFGGEI HTPNIDSLAQEGRILTDYHTAPTCSPTRSQLISGTDHHLAGIGAMAELTPDHLKGQPGYE GYLNERSLSIAQVLKDNGYRTYISGKWHLGLTPETNAHAKGFDHSFTLLQGLDHHFKQAP SAFKRNSTYTEDGQIIPISALPDDFFSTNYFTDKLLSYLESGKNSGKPFFAYAAYTAPHW PIQAPAEYREKYRGVYDVGYDAIRNARIARQKQLGIIPVNFEAAEPIATQNAPQKYGKWN ELTAEQKALEARKMEIYAGMVENLDANVGRIIQYLKQNNLYDNTLIFFVSDNGAEGFVRG SYGSESGFDNSVANVGTPTSYHYIGPRWAEVSAAPFHLWKDTAGEGATTAPAIVKLPNQK KAEETNHSFASVLDVFPTLLDYAHIPVPQGQYKGRTINTPSGYSWKSVLENKSQTIRPAN FSFADELHGSKYAKQGEWKIALQGRPELGTGSWELYNIATDRGENHNVAQLYPAKVQELL AVYQKYTEQNGVQEYNAK >gi|333032601|gb|GL891825.1| GENE 28 31207 - 32214 777 335 aa, chain + ## HITS:1 COG:CC1173 KEGG:ns NR:ns ## COG: CC1173 COG1262 # Protein_GI_number: 16125425 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 54 334 30 336 338 202 41.0 6e-52 MKLKLVLSTTIGLLFITGCSKSEHNADAKTVLPKHAIQSAALGSIEQCKSYTGLPTDWLK NTTAGMVFIPDGHFNFGSEKAYPDELNFGKKQREVKGFWIDQTEVTVAQFASFVKATGYI TDAEKQKQAAVFSPDPHHPQQWWQLKTGYTWKTPNGKNGALPNPHEPVRYVTKNDAEHYA VWLGRDLPTELEWEYAAKANSPTDTPLHQAPTDEHQHPQANYWQGAFPFENLNQDHFTGI APVGCFKPNGFKLFDMIGNVWEWTSSPYQGAHDQHMGNYSALRQQEMSSTQYVIKGGSFL CAENYCSRYRNSSRYPQDFDLAATHVGFRTILRSP >gi|333032601|gb|GL891825.1| GENE 29 32324 - 32488 109 54 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00937 NR:ns ## KEGG: ACICU_00937 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 54 1 54 54 99 100.0 6e-20 MKTLLLCAAAIFTMSLSACAVHTPEGSIVIDPDSPYYGHPGDFCPPGQAKKGRC >gi|333032601|gb|GL891825.1| GENE 30 33025 - 34572 1423 515 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00936 NR:ns ## KEGG: ACICU_00936 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 515 1 515 515 1013 100.0 0 MSSQSPAEGLQFPIHASIKKQSTSLTGQEILSEALSIVDNKTAQQILAEKNWRKNYPIYF KALVKHGITNSNNPITIAKQGLHKAHHLFDYYRDGKHYLLKDALHIPTSTPLNTVKFKGE SEAAPEWYVPYKGQKLSGQSLLDQIQKWENAGIIEPSHAKALREAAAHPEWFDLSDRTMV LFGAASEAGPLPWLARWKANIVAIDLPNPRVWGKILNTIQQGNATLIAPSIEKIDSSAKA SALRDKLGANLLTQIPEIAQWLVQFPQKLDLAAIAYLDGEKHVRVSMAMDSIMQYVSEHK PDTSLMFMCTPTDVYAVPKEVAEAAQEKFKSRSQLQKMAVKGVSTLSLKRFFQAPYQDLI TSENGKTYGIADCLVVEQGPNYALAKRIQQWRATLARHQGQRVSINIAPSTTTHSVTKNP LLKAAFNGAELFDVEAFSPETTNAIMAALWIHDLRNDSSVANPETVLDHPLELMMEGANH GGLWRVAYLARTALPFAAIYGFAAEKLPFRKFSKK >gi|333032601|gb|GL891825.1| GENE 31 34616 - 35950 1197 444 aa, chain - ## HITS:1 COG:ECs3245 KEGG:ns NR:ns ## COG: ECs3245 COG3048 # Protein_GI_number: 15832499 # Func_class: E Amino acid transport and metabolism # Function: D-serine dehydratase # Organism: Escherichia coli O157:H7 # 1 438 1 438 442 595 69.0 1e-170 MNAVQIDQLKQQFPLIETLQAYQETFWFNPHRYPLNEALAKVCLTEQDVKEAEARLARFA PYLAKVFPETQAQHGKIESALVEIAEMQQALSLQKHKTLTGKLWLKKDSHLPISGSIKAR GGIYEVLAHAEKLAIEAGLLKLEDDYSKLDQDSFRTFFSKYQIAVGSTGNLGLSIGIMSA KLGFRVSVHMSADARQWKKDKLRSLGVNVVEYASDYGVAVEEGRKAAEQDPFCFFIDDEN STTLFLGYAVAGLRLKQQFEQKQIKVDADHPLFVYLPCGVGGGPGGVSFGLKLAFGEHVH CIFAEPTHSPCMLLGVYTGLHDQISVNDIGLDNITAADGLAVGRASGFVGRAMQQLIDGY YTIHDECLYELIALLNQTENIQVEPSAAAGMMGPYYVQTTPDYLALHQLSAEKLQHATHV VWATGGGMVPPDEMQKYLTYSQRN >gi|333032601|gb|GL891825.1| GENE 32 36117 - 37748 1251 543 aa, chain - ## HITS:1 COG:PA0450 KEGG:ns NR:ns ## COG: PA0450 COG0306 # Protein_GI_number: 15595647 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Pseudomonas aeruginosa # 1 542 1 539 540 516 53.0 1e-146 MNSNLPPVSDSKLAANLQAKSTNVHVPTPKFFMPVFLTIIIATLIYIGFQVSADLAHVPP LSLYSVILLSTALLIALGFEFVNGFHDTANAVATVIYTNALPAPVAVMWAGFCNFLGVMV ASGAVAYGIIALLPVELIMNMGSGAGFAMVFALLIAAILWNLGTWFLGIPASSSHTLIGS ILGVGIMNHLLSASTGVTTSGVDMDQVIKVGKALLFSPLIGFAFAAIVFLLVKTIFKRQL ELFQPPEGNKPPPAIIRAILIFTCTGVSFAHGSNDGQKGMGLIMLILVGLVPLAYSLNKN LDTQQVQSFHQLSSQTAVLLNQNQPELTDEKARAVLTKYIQTKQQTPEVVPALASMTDHL GERVSSYSNLKDIPEAAISEIRNDMYLSTTTFKRLDKADALPKMDDSQKKLVKDYRSSLD SFLQYIPNWVKVAVALALGLGTMVGWKRIVVTVGERIGKHHMTYGQGMSAELVAMSTIAA ADGLGMPVSTTHVLNSAVAGTMVANKSGLNFNTVKTILSAWVFTLPATICLSGGLYWLFL QFV >gi|333032601|gb|GL891825.1| GENE 33 38210 - 41896 4236 1228 aa, chain + ## HITS:1 COG:PA1843_2 KEGG:ns NR:ns ## COG: PA1843_2 COG1410 # Protein_GI_number: 15597040 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase I, cobalamin-binding domain # Organism: Pseudomonas aeruginosa # 327 1223 1 894 898 1249 68.0 0 MSTLATLKALLAKRILIIDGAMGTMIQRHKLEEADYRGERFADWAHDLKGNNDLLVLTQP QIIQGIHEAYLDAGADIIETNSFNGTRVSMSDYHMEDLVPEINREAARLAKAACEKYSTP DKPRFVAGVLGPTSRTCSISPDVNNPAFRNISFDELKENYIEATHALIEGGADIILIETV FDTLNCKAAIFAVKEVFKQIGRELPIMISGTITDASGRTLTGQTAEAFWNSVRHGDLLSI GFNCALGADAMRPHVKTISDVADTFVSAHPNAGLPNAFGEYDETPEQTAAFLKEFAESGL INITGGCCGTTPDHIRAIANAVKDIAPRQVPETVPACRLSGLEPFNIYDDSLFVNVGERT NVTGSKKFLRLIREENFAEALEVAQQQVEAGAQIIDINMDEGMLDSQNAMVHFLNLVASE PDISRVPIMIDSSKWEIIEAGLKCVQGKPVVNSISLKEGYDEFVEKARLCRQYGAAIIVM AFDEVGQADTAERKREICKRSYDILVNEVGFPAEDIIFDPNVFAVATGIEEHNNYAVDFI EATGWIKQNLPHAMISGGVSNVSFSFRGNEPVREAIHSVFLYHAIKQGMTMGIVNAGQMA IYDDIPTELKEAVEDVILNQNQGESGQVATEKLLEVAEKYRGQGGATKEAENLEWRNESV EKRLEYALVKGITTYIDQDTEEARLKSKRPLDVIEGPLMDGMNVVGDLFGSGKMFLPQVV KSARVMKQAVAWLNPYIEAEKTEGQSKGKVLMATVKGDVHDIGKNIVGVVLGCNGYDIVD LGVMVPCEKILQTAIDEKCDIIGLSGLITPSLDEMVFVAKEMQRKGFNIPLLIGGATTSK AHTAVKIDPQYQNDAVIYVADASRAVGVATTLLSKEMRGAFIEEHRAEYAKIRERLANKQ PKAAKLTYKESVENGFKIDESYVPPKPNLLGTQVLKNYPLATLVDYFDWTPFFISWSLTG KFPKILEDEVVGEAATDLYNQAQAMLKDIIDNNRFDARAVFGMFPAQRTDADTVSVFDEA GQNVTHTFEHLRQQSDKVTGKPNLSLADYIRADREQQDYLGGFTVSIFGAEELANEYKAK GDDYSAILVQSLADRFAEAFAEHLHERIRKEFWGYKADEQLSNEELIKEKYVGIRPAPGY PACPEHSEKAVLFDWLGSTDKIGTKLTEHFAMMPPSSVSGFYYSHPQSEYFNVGKISQDQ LEDYAKRKGWTLDEAKRWLAPNLDDSIV >gi|333032601|gb|GL891825.1| GENE 34 41977 - 42981 1185 334 aa, chain - ## HITS:1 COG:mll5764 KEGG:ns NR:ns ## COG: mll5764 COG3958 # Protein_GI_number: 13474796 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, C-terminal subunit # Organism: Mesorhizobium loti # 10 330 16 336 340 450 68.0 1e-126 MSQLANPPKKKLTTSAMIASIAAEGQPTKPAPFGHALNSLTKDRDDIVGLSADLSKYTDL HIFAKENPDKFFQMGMAEQLLMSAAAGLAREGFVPFATTYAVFASRRAYDFICMAIAEDN LNVKIVAALPGLTTGYGPSHQATDDIAIFRAMPNLMVIDPCDALEIEQAIPQIAAHNGPV YMRLLRGQVPLVLDKYNYQFKLGKAQVIKPGKDLLIISTGLLTMRALEAAEELEKEGIEV SVLHVPTIKPLDEQTILDEVAKGGRPVLTAENHSVIGGLGEAVGSLLLRNGQHPRFDMIG LPDAFLDAGALPTLHDRYGISTEAVKEKIKAHLK >gi|333032601|gb|GL891825.1| GENE 35 42992 - 43837 1118 281 aa, chain - ## HITS:1 COG:mll5765 KEGG:ns NR:ns ## COG: mll5765 COG3959 # Protein_GI_number: 13474797 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase, N-terminal subunit # Organism: Mesorhizobium loti # 6 276 3 273 279 405 70.0 1e-113 MLNVDKVGQIAELQQRAYHIRQHALRMGQVQGQGYVGQALGAADLLAVSYFHAMKYQPEN PEWEGRDRFYLSIGHYAIALYAALIEAKIIPLEELETYGADDSRLPMSGMASYTPGMEIT GGSLGHGLGIAVGACLGLKQKKSDAFVYNLLSDGELNEGSTWEAVMSASHWKLDNLIAII DVNNQQADGHSSEILAFEPIVDRWQSFGWYTQRVDGNNMEALLEAFDQARNYEGACPRVI ICDTKMGKGVSFLESREKTHFIRVDEHEWDDALNILTHYGQ >gi|333032601|gb|GL891825.1| GENE 36 43857 - 45158 1318 433 aa, chain - ## HITS:1 COG:BMEII1096 KEGG:ns NR:ns ## COG: BMEII1096 COG0477 # Protein_GI_number: 17989441 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Brucella melitensis # 13 433 32 451 451 460 56.0 1e-129 MDTVFSSEVDTTVRKSAYRKIAFRLMPFLMLCYFCAYLDRVNVGFAKLQMMSDLQFSEAV YGLGAGIFFIGYFLCEVPSNIVLHKVGARRWIARIMITWGILSGCFAFVQTEWQFYTLRF LLGVAEAGLAPGLLLYLTYWFPSYRRARMTVLWFIAIPISGMIGGPLSGLIMDRMSGVHG WFGWQWMFVIEAIPTVIVGLLVLAVLKDSVQDANWLTQDEKNLVKQELAQDNQHKEGHAS VKEFIADKRLWLLAGIYFCVVMGQYAITFWLPTLIRNSGISDNWHIGLLTSLPYMCAIVV MILAGRSGDHFQERRWHLIIPMCAGAIALTFATLFASNLTLSLICLCIAASGVLTASSLF WMLPTNFLGGVSAAAGIAAVNSFANLAGFCSPYLIGWVTTNTGSNAIGMFLITAVLIFGA SLVLRVPAKLVNR >gi|333032601|gb|GL891825.1| GENE 37 45234 - 45983 248 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 244 1 238 242 100 29 3e-20 MLLQGKVALITGAASERGIGRATAEIFAQQGAKVIIVDLDLAQSQNAAKALGDGHLGLAA NVANEEQVKAAVEQALQHYGKIDILINNAGITQPVKTLDIQRNDYDRILDVSLRGTLIMS QAVIPSMKANGGGSIVCLSSVSAQRGGGIFGGPHYSAAKAGVLGLAKAMAREFGGDQIRV NSLTPGLIQTDITGGLMNDDRRHDILAGIPLGRLGKAQDVANAALFLASDLSAYLTGVTL DVNGGMLIH >gi|333032601|gb|GL891825.1| GENE 38 46138 - 47043 713 301 aa, chain + ## HITS:1 COG:AGl3310 KEGG:ns NR:ns ## COG: AGl3310 COG0583 # Protein_GI_number: 15891774 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 298 2 288 298 171 34.0 2e-42 MDSSENNFNQMPSIKTLQAFEQTARFGNVAKAAEHLNLTPSAVSHQIAKLEEMIGQSLFI RGARGVTLTPSGERYFQDVTTILHNLMLATEKAADKSPKDSLYIHSSPSFGLLWLLPRLE SFKEKFPMIQVNLSCSYENLHFTRDKIDIDIRHGLPNWTGVEIRTIRNEKLEVLASPKLL ERSPVHKPQDLLKKDLILSRSTLVTWPQWFAHQGLSIPEFPYTLSFDRSYMSLEAATHGL GFVLESNLLTQNYLESGKLVRVFADELSIPISAHHLVYPRTHQFIPKIELFLNWIHDELS G >gi|333032601|gb|GL891825.1| GENE 39 47055 - 47501 222 148 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00927 NR:ns ## KEGG: ACICU_00927 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 148 1 148 148 261 100.0 7e-69 MNHPNSVLKFSLGLNGMSFDLDNQPIHLEQGLVFINSKSISNGVIDELAIEKMIYFIEEI IESQPLRNLNINGIAVTADTTMTQLSELFFSAKKQISRIELENGFNSFIERLSYYTNQVD PNQLYIFTYFVFIREMMHHLRVEQIQII >gi|333032601|gb|GL891825.1| GENE 40 47693 - 48838 394 381 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900011|ref|NP_344615.1| aldose 1-epimerase [Streptococcus pneumoniae TIGR4] # 33 380 13 345 345 156 30 4e-37 MKKLAILGVTVYSFAQLANAATLNVKPYGTTQDGQKVDLYTMSNNNGVSVSFISFGGVIT QILTPDAQGKQNNIVLGFDDLKGYEVTDTKEGIHFGGLIGRYANRIGNAKFSLDGKTYNL EKNNGPNSLHSGNPGFDKRVWQVKPLISKGETVKASLKLTSPNGDQGFPGKLDVEVIYSL SDQNEFKIEYKAKTDQPTVVNLTNHSYFNLSGAGNNPYGVLDHVVQLNADRILVTDQNSL PTGEIASVAGTPFDFRTPKAIVKDIRANNQQLAYGYGYDQTWVINQKSQGKLNLAAIVVD PKSKRTMQVLTTEPSVQMYTANHLLGNIVGANGVLYRQADALALETQHFPDSPNQPAFPS TRLNPNQTYNSVTVFKFGVQK >gi|333032601|gb|GL891825.1| GENE 41 48906 - 50126 1359 406 aa, chain - ## HITS:1 COG:YPO3093 KEGG:ns NR:ns ## COG: YPO3093 COG0477 # Protein_GI_number: 16123267 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 27 402 24 400 404 374 57.0 1e-103 MTSSIQLKDGIANTVANDQSQGMIIKIVGAVAVAHLLNDLIQAVLPAIYPMLKANFSLSF AEVGLISFVYQITGSLLQPWIGLYTDKHPKPYLLPLGMVVTFCGIILLAFSPSFAVLLCA SALIGVGSATFHPEASRVARMASGGRFGTAQSTFQVGGNTGTAIGPLLAALLIVPFGQHA VAGLVIFALLAIWVLFGVSRWTVNHAKSQVAARATQVHTKLHGRKLIIALSTISVLMFAK FTYIASISNYFTFYLIQKFHISIQTAQLHLFAFLAAVAVGTFAGGPIGDKIGRKAVIWVS FIGMAPFALMMPYANLFWTTVFSIIAGLVLSSAFAAMVVYAQEAVPGRVGMIAGLMFGLM FGVSGIAAAGLGHLADINGIEWVFGLCSLLPLLGFATALLPNTKVK >gi|333032601|gb|GL891825.1| GENE 42 50233 - 51021 725 262 aa, chain + ## HITS:1 COG:PA3927 KEGG:ns NR:ns ## COG: PA3927 COG2207 # Protein_GI_number: 15599122 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 30 255 27 247 262 161 37.0 1e-39 MSDSLIQSDLSELVIGLSSEHSYREITPTHTHTRAQFLYASTGNIQVFTPNHVWIVPPMC ALWIPANVEHSVISLSHVKLNTALVEVNAAARMGQHCFIIRVSNLLHELLIRLNEIEREE TPNTATSQELSRSLQILIFEEIQRANLLPIQIPWPKDKRLLKICQELLHTPNHSRDLTDW ADDIGASSRTLMRMFQKETGLSYRAWVQQMHIALALSKIANGESIAQISESLGYTNPSAF SAMFKRHLGKTPQQFRSAAMSL >gi|333032601|gb|GL891825.1| GENE 43 50988 - 52310 1376 440 aa, chain - ## HITS:1 COG:Cgl2430 KEGG:ns NR:ns ## COG: Cgl2430 COG2066 # Protein_GI_number: 19553680 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Corynebacterium glutamicum # 1 398 2 398 413 376 49.0 1e-104 MKTPLPDYLANVIEACDIDNSGHLADYIPELANANPNRLALAMSTVDGEIYSVGDDDVEF TIQSISKPFVYAYVLQQLGIDAVLAKVGVEPSGEAFNEISLGKDGRPKNPMINSGAITVH SLIQVKHGLHSAEILRRFMSELAGRELSFDESVYDSEVKTAYRNLSIGYMLRTVGILETD PVDIVNGYIRQCAIMVTVKDLVRMGSVLANGGVDPKTGKRLLNRSVVRQVLSVMMSCGMY DAAGDWLSTVGIPAKSGVAGGILGVLPGQVSIAAFSPRLDEHGHSVRGIDILERLSRDMG LHLMEGTPSAQTIVQSHYRTGKDASLSVYVLRGVLKFTEAEMLLRILQDETTDQSTIVID LTQISLIHDVGKRMFLEGVDRLIDDGHTLVLVDPEQRLDHARTAKDRELHVYHDFDDLLE KHEIPAKKKTYSDIAALLNC >gi|333032601|gb|GL891825.1| GENE 44 52489 - 52971 537 160 aa, chain - ## HITS:1 COG:all2007 KEGG:ns NR:ns ## COG: all2007 COG0242 # Protein_GI_number: 17229499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Nostoc sp. PCC 7120 # 4 159 5 158 179 134 46.0 9e-32 MSVVLPVAKRGEDILKLIAAPVSANELNSNWLYQLADAMHATMLERNGVGIAAPQVYISK RIIIVASRPNPRYPDAPEMNAVVMVNPEILEFSSETCLGEEGCLSVPDERGQVERAEMVK VKYLTLQGEAVETIFHGFPARIVQHEVDHLNGILFVERIS >gi|333032601|gb|GL891825.1| GENE 45 53206 - 54504 1199 432 aa, chain + ## HITS:1 COG:YPO0465 KEGG:ns NR:ns ## COG: YPO0465 COG0477 # Protein_GI_number: 16120794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 13 409 32 427 462 401 53.0 1e-111 MDQELTLQDANYLNKEDKRTLALSSLGGALEFYDFVIYVFYAKIISDLFFPSTLSPFWAM LNTYGIFAAGYFFRPLGGVVMAHFGDLVGRKKLFSLSILLMALPTLFIGILPTFENIGYL APLLLLLMRVVQGIAIGGEIPAAWTFVSEHVPERKIGLANGLLTAGLSLGILLGALMSLW ISLNFSEGQIHDWAWRIPFIVGGIFGLVALYLRTYLKETPVFKAMQARKEISKEMPVKQV LKTHKTAVAIGMLFTWFLTGCVVVVILAMPNLLIGSFGFERAQTFEMQSAAIVMQMVGCI LAGYFADRFGCGKVMMVGALAVALTAAVFYNSLGHAAHSTIFGLYMLLGLCSGTVGMVSS SMVKMFPAPVRFSGISFSYNLSYAIVGGMTLPLVHWLSQYSDIGAMYYIFALTILAFVTA FVFWNKFEKNRY >gi|333032601|gb|GL891825.1| GENE 46 54567 - 55763 1270 398 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00920 NR:ns ## KEGG: ACICU_00920 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 398 1 398 398 770 100.0 0 MKKTSLIMAFIAPLTLGVSVNAFAKDSLLEWKSDDGTDSLKLGGVVRLNQRYEDWEGPNR GFGKLYFDIFRVDLKGKFDDAYINASYLFQDQQKTSIEKAYVGYNLDANNSIEAGLVYKP FTIYPYPQNGWTYHIPFFLGYGNNIAPGLNWNYHDKDWDVKLGYYPQMLETNLRYSPESA TYDDLQENAFPSQKAYQNEKRHQFNTRIVRKLETDFGKQEFGVSGAIAQLHNKVTDKDGK YYAVGLHTENNYKRFNLQSSVIHYQYDAKNPDGVNSDMTLMGNNGFTPAYFIASEGTIAS LNLAYTLPVTNMGKLKAIKFYNDYSYLDKKRDDWSDSQMNTTGMMFIASPFMVWADYTWG KNSNIIGGATNSTGYTSATSPNSDKWLYRINFNIGFTF >gi|333032601|gb|GL891825.1| GENE 47 55919 - 57559 2080 546 aa, chain - ## HITS:1 COG:PA3506 KEGG:ns NR:ns ## COG: PA3506 COG0028 # Protein_GI_number: 15598702 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Pseudomonas aeruginosa # 4 541 6 549 560 442 45.0 1e-123 MTERVNVGEAIARVLEAHQVDSIYGVISIHNLPIADAVGRREKMRFVAARGEAGAVTMAD AHSRFKGLGVALTSTGAGAGNAVGSLIEAMNAGSPVLHLTGQVEREYLDRDASFIHETKD QLTFLRASSKAAFRITSPDNAVGVIREAIRVATTVPMGPVSVELPIDVQAAEIDLPLNLG PVKALELPQAEQAEIDLLVSEIKKAKRPIFWIGGGTLNSVAEVKAIADLGIPVVSSTHAR GVLPDDHPRSLGAFHNSAGVEQLLKDADLMVVVGSRLRSNETKTYSVEFPENIIQVDANP VAQQRNYKIRNFICGDAKDVLTRVLEQLQGTSKVDADYDAAVVAAKQAAIDALRKQIDQY ALICDHLRAALPQDGIFVRDITMSGSTWGSRLFPVQAPNQNIHSLAGAIGLGLATAIGAS IANPDKKVIGLVGDGGLMLGIGEIATMVQENTNMVLMIMNDGGYGVMRGIQNNYFGGRQY FNELHTPDYKLLGESMGVKSWKVGSAEEFKTVIQEAVAFEGPTVIELDMNSIGPLNFAGP PQKKLY >gi|333032601|gb|GL891825.1| GENE 48 57598 - 59064 1778 488 aa, chain - ## HITS:1 COG:PA3504 KEGG:ns NR:ns ## COG: PA3504 COG1012 # Protein_GI_number: 15598700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 3 486 8 490 494 572 59.0 1e-163 MAKEIYIAGEWRLGRGAVIQSLFPADQSVNAELSTATLEDVNEAIEKAEQAWRQPSWRNS LPHERARILYKVADIIEARVDELSKLQTRDNGKPLTETRGLVMSAAATARYVAAACETLN DELTTQRAPDFMTMSVHEPVGVVAAITPWNSPIASEVQKLAPALAAGNAVVLKPAEATSL IALELAKIFEEAGLPKGLLSVLVGRGSIIGDAIAQHPLVRKISFTGGTTTGRHLAHIAAD KLITTSLELGGKSPTIVLPDADVELAAKGVAYGIFSSAGQACIAGSRLFIHSSLYDQFLT RLVEITKGLRVGHPEQAGVHLGPLVNDKHLQSVDRYVQLAKSEGGQVLIGGEALTTGDYA KGSYYLPTIITGLNNSAQTCQEEIFGPVLVVMKYDNEQDLIAQANDSCFGLAAGIWTESY RKAWRIARALEVGTVWINTYKKFSISAPFGGFKDSGIGREKGRLGILSYMQQKSIYMGLN EQPNPWCD >gi|333032601|gb|GL891825.1| GENE 49 59078 - 59869 800 263 aa, chain - ## HITS:1 COG:RSp0722 KEGG:ns NR:ns ## COG: RSp0722 COG1712 # Protein_GI_number: 17548943 # Func_class: R General function prediction only # Function: Predicted dinucleotide-utilizing enzyme # Organism: Ralstonia solanacearum # 1 263 1 268 268 188 39.0 8e-48 MKKLMMIGFGAMAAEVYAHLPQDLQLKWIVVPSRSIEKVQSQVSSDIQVISDIEQCDGTP DYVIEVAGQAAVKEHAQKVLAKGWTIGLISVGTLADSEFLVQLKQTAEKNDAHLHLLAGA IAGIDGISAAKEGGLQKVTYKGCKSPKSWKGSYAEQLVDLDHVSEPTVFFTGTAREAAMK FPANANVAATIALAGLGMDETMVELTVDPTINKNKHTIVAEGGFGQMTIELVGVPLPSNP KTSTLAALSVIRACRNSVEAIQI >gi|333032601|gb|GL891825.1| GENE 50 59885 - 60679 251 264 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 8 258 4 238 242 101 31 1e-20 MSFQVEGKVAVVTGGSSGIGLAAVEILVAEGAKVAWCGRDEERLNASKHYILEKFPHANI FTKACNVLKKEEVQQFAKEVKLNLGNVDMLINNAGQGRVSNFENTQDEDWMKEIELKYFS VLHPVRAFLDDLKQSANASITNVNSLLALQPEPHMIATSSARAALLNLTHSLAHEFTQYG VRVNSILLGMVESAQWKRRYETRSDLNLSWEEWTGNIAKNRGIPMQRLGRPEEPARALVF LASPLASYTTGSAIDVSGGFNKHL >gi|333032601|gb|GL891825.1| GENE 51 60695 - 61519 798 274 aa, chain - ## HITS:1 COG:PA3509 KEGG:ns NR:ns ## COG: PA3509 COG0596 # Protein_GI_number: 15598705 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 11 261 17 269 289 146 40.0 5e-35 MMTLIEKLAEFPVKTVNVQGQQQAYREAGQGEYLVLLHGISSGSASWVNQLEVLSHHFHV IAWDAPGYGKSDELLTDQPNATDYAKRLAGLFDALKIEKAIVVGHSLGALQGSAFAALCP ERVKHLVVANLAQGYQRHDEQTQIQVFEKRPKMLKELGAKGMAQSRGPHLIYKQEPQALA LVSEVMQQLTLQGFTHASYLLAYDEIRNYLTDLKVPCTVIAGQQDQITPALGIQELAQEL QLEQRFVIEDAGHLSYVDQPQAFNQIMLTIQEQS >gi|333032601|gb|GL891825.1| GENE 52 61555 - 62076 718 173 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002659 NR:ns ## KEGG: ABBFA_002659 # Name: not_defined # Def: cupin domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 173 1 173 173 355 100.0 5e-97 MTTQQFESWKQPEGASLEDWLNTRIARFETRKYDFEALKFQADYDPKYRRAQMRYMGTGA TGVANDSNTVPAENFTFSTMVLPPQCEGPLHIHHDVEEVFFMLRGEIDLFIEHNGEKFQT RLKERDLISIPPGIYRGLFNPGQEDALMCVMLGTGKPTIPNYPPEHPLSQIKR >gi|333032601|gb|GL891825.1| GENE 53 62100 - 63323 1114 407 aa, chain - ## HITS:1 COG:STM3832 KEGG:ns NR:ns ## COG: STM3832 COG0477 # Protein_GI_number: 16767117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 10 407 12 420 420 164 26.0 3e-40 MSNEEKSGLKHWVPAFVLMVCVVLAFFDKISIAVLFSDPHFQSSMGIAEDKAKLGWLMTS FLLAYGFSSVFLSFLGDIFNPKKMLFWSVTSWGLLMLCMGFTTSYSGMLILRVLLGLAEG PLFALAYTIVKQTYTDRQQARASTMFLLGTPIGAFLGFPITAAVLAHHDWHTTFFVMAAL TLIAILSIVFGLRNLQLKKTVELEGESKRTNFKGHIANTKVLVSNSAFWLVCLFNIALMT YLWGLNSWVPSYLMQDKGFNLKEFGVYSSFPFIAMLIGEVVGAFLSDKLGRRAIQVFSGL LLAGIFMYVMVIMTEPLLIIAAMSLSAMAWGFGVAAVFALLARVTTSNVGATAGGIFNGL GNFASAIAPVLIGYIVMQTHSFNLGITFLAAVAVIGSLFLVPLLKRY >gi|333032601|gb|GL891825.1| GENE 54 63366 - 64577 1337 403 aa, chain - ## HITS:1 COG:AGc1870 KEGG:ns NR:ns ## COG: AGc1870 COG0446 # Protein_GI_number: 15888357 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 380 4 382 405 215 36.0 1e-55 MEKIVIVGAGQAAGWAVSTLRQNGYVGEIHVVSNEDHVFYERPPLSKQVLSKEASYESLN LFSPEQVQEFNIQWHKPEIATKVDREQKQVHLESGQILPYDKLLIATGSRARVPVNTWQF IPNVVTLRNVRDCERLAEILKNAKNVAVIGGGWIGLEIAATARKQGKDVHIFEYGDRLCA RSVSPEVSAFLKNMHEAQGTKIHLDSKSLHLVEAPDQKVEVVNHPQHSQLFDCVVVGAGA EIAKELGVHAGLDVKDGIVVNCFGQTSDQDIYAAGDVAIHPGLGYCIQSWANAQNQAIAA AKSMLGIETEYTDIPWLWSDQYHFNIQILGTYQPEKTKEVVIRQGGEDQVSYLYLDHENR LLNMIAINDSKLIKLAKRWMQANTVLDPKLLADAEFNVMKLKP >gi|333032601|gb|GL891825.1| GENE 55 64607 - 65536 1066 309 aa, chain - ## HITS:1 COG:PA3503 KEGG:ns NR:ns ## COG: PA3503 COG0346 # Protein_GI_number: 15598699 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Pseudomonas aeruginosa # 137 305 26 194 211 230 62.0 2e-60 MITGIEILKFGVEDRAASNKFLADFGLSKSTSDIEGADLYQTQNGSKIYLFNCDDNRLPP AIEQGSTLREVTWGVENAQDLEDLAARLADVDGFKRTENTVQCLDPNGMTIRFEQSFVKE VPELKTEGINQYGNIQRVNAASPVYEKGQPVAIGHVVFFTPDLATTENFYIEKVGFHLSD AYKNRGAFLRCRGEGYHHDLFLLSVPNKSAGLNHVAFVVRDIHEVIGGGLHMNRSEWSTF IGPGRHPISSAYFWYVNSPLGGAFEYYTNDDYLTEEWQPRVEEHRLELFTEWAIEGGLDD KTRRQVKPV >gi|333032601|gb|GL891825.1| GENE 56 65548 - 66312 217 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 249 1 238 242 88 29 1e-16 MANVALLQGKKVLVTGAARGLGRDFAQAIAEAGAEVVMADILSDLVQQEAQALQQQGLNV HAVTVDLANADSIENAVAKSVEVLQGLDGLVNCAALATNVGGKNMIDYDPELWDRVMNIN VKGTWLITKACIPHLKQSAAGKIINVASDTALWGAPNLMAYVASKGAIVAMTRSMARELG QFNICVNTLSPGLTLVEATEYVPQERHDLYVNGRAIQRQQLPQDLNGTALYLLSDLSSFV TGQNIPVNGGFVFN >gi|333032601|gb|GL891825.1| GENE 57 66305 - 67372 1228 355 aa, chain - ## HITS:1 COG:PA3500 KEGG:ns NR:ns ## COG: PA3500 COG4638 # Protein_GI_number: 15598696 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 5 340 1 336 339 367 52.0 1e-101 MNAIVSTSQSAEEYLELGLRDQWHPVLASWEVAANPVGITRLGENIVVWRDAEGQVHALE DRCPHRGARLSLGWNLGDRVACWYHGVEVRADGVVADVPAVHECPMTGTKCLKSYPVIEQ HGAIFIWFGIDANEQPAPLEFPEQLASEEWSSFLCQADWKVNHQYAIDNVMDPMHGTYLH CTSHSMAEGERTAEMKHRTTENGFVFEKEGQTGVNFDWVEYGSTGASWLRLSIPYRKQFG PGGEFWIVGYATPIDANNTRVFFWRCRKVSGWQRNVWRFLYRNHLEQLHWDVLEQDRIIL ENLAPNARAREFLYQHDVGLARLRRLMKKEAEKQLKKIAALNASNRIEMQEEAHG >gi|333032601|gb|GL891825.1| GENE 58 67389 - 67688 398 99 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00908 NR:ns ## KEGG: ACICU_00908 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 99 1 99 99 178 100.0 5e-44 MKKFNEKLASWIHATPATEAGINNIQVPGQSELLVWQTRYKEPTLYEQDFVKNLIQAFSA GATELDEVVSALNQQGFRSESGDEWTSESFTEEMQRLGY >gi|333032601|gb|GL891825.1| GENE 59 67716 - 68021 320 101 aa, chain - ## HITS:1 COG:YPO0928 KEGG:ns NR:ns ## COG: YPO0928 COG2146 # Protein_GI_number: 16121233 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Yersinia pestis # 1 101 1 101 106 105 42.0 2e-23 MSWISVCQQGDVSEDEPKAVEVEGKKIGVFFVDENYFAIENVCPHAYALLTEGFIEDQTV ECPLHEAIFDIQTGELKSGPGCRNLCTYPVRVEGQDIQIQL >gi|333032601|gb|GL891825.1| GENE 60 68295 - 69107 807 270 aa, chain + ## HITS:1 COG:PA3508 KEGG:ns NR:ns ## COG: PA3508 COG1414 # Protein_GI_number: 15598704 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 13 269 3 255 277 136 31.0 4e-32 MSLEIEEDSQESETTKNDDRYLVPGLVRGLAILQAFNQQAQEMTITEIAEILEVNRSSAF RLIYTLEACGYLRKASQKTYALDSKVMELGFNSLSKLSLLDLSTPLMKELRDQTKLAVHL TVLEGTHIVFVNNVQSMGTFTSNISLGTRWPAHATVIGQMLLSDLPEAEVRQRYRNFNDW DSYSELTPTSLKALLQKLNYVKTQKSMVSWGHYNHDMAACAAPIFKQSNGKMVAVLSVSC PITTYDEKTFKEDIAALVIATADKISKFIY >gi|333032601|gb|GL891825.1| GENE 61 69153 - 69452 378 99 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00905 NR:ns ## KEGG: ACICU_00905 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 99 1 99 99 172 100.0 5e-42 MLLSLDTYKQQQFDQIAAKIMGEPEKYIDFNSVSDFYNAAWLKDFPQGTQASATGLDDGA EEFYAVVQFKQQYLKFDIKENHSTLSFQDMNGEIFKRNF >gi|333032601|gb|GL891825.1| GENE 62 69467 - 70048 618 193 aa, chain - ## HITS:1 COG:PA1958 KEGG:ns NR:ns ## COG: PA1958 COG3201 # Protein_GI_number: 15597154 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide transporter # Organism: Pseudomonas aeruginosa # 1 181 1 181 191 132 40.0 6e-31 MSPLEIFAVLISLIGVGLTVIRNMWCWLFNFFAFVLYAYLFYEFKLYGETILQFFFMVVN FYGFYYWLKGKQQDHDIRIEPIAVQTAIIQMIIAAVGGLLFGLVLKNFTDAAVPMLDSQL AAFSLLATYWTSRKHIATWILWVFVDIVYVGMFIYKDLFLTSALYAAFVLMAAYGWYQWE KVKRKQNLDAGQL >gi|333032601|gb|GL891825.1| GENE 63 70296 - 71084 895 262 aa, chain + ## HITS:1 COG:PA1240 KEGG:ns NR:ns ## COG: PA1240 COG1024 # Protein_GI_number: 15596437 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Pseudomonas aeruginosa # 6 262 9 265 265 311 58.0 1e-84 MSNQEGKVSRETRGHIFLIGLDRAAKRNAFDSHMIKDLSLALTEYENNDALRCAIVFAHG DHFTAGLDLVELQPKLATGVFDFSENEINPWGTIGRKLSKPLIVAVQGYCYTAGIELFLN ADITIASENTQFAQMEVQRGILPFGGATARFTQAAGWAKAMRYLLTGDSFDAKAAFDMNL ITEICPEGTELKRAIELAEHIAQAAPLAVKATLASAREAVNEGYEVAFNQLQNHLQPLLT TEDVQEGVFAMLQKRPPVFKGK >gi|333032601|gb|GL891825.1| GENE 64 71187 - 71606 351 139 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002670 NR:ns ## KEGG: ABBFA_002670 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 139 1 139 139 271 100.0 8e-72 MKTNSLIIDLRRQLPWHKRYASTTSTAMMWAAWLLLWRPFVFIWVLAELQKTHLVHRLFS AFGVGIEHGITALIACAVGLLLWSHVLPERRVEGSELNMKQTDDYARYFDLPVQEIEQGR SQKITVVHHNEFGKIIRVE >gi|333032601|gb|GL891825.1| GENE 65 71689 - 72948 1246 419 aa, chain - ## HITS:1 COG:YPO1953 KEGG:ns NR:ns ## COG: YPO1953 COG1215 # Protein_GI_number: 16122199 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Yersinia pestis # 12 417 31 439 444 437 53.0 1e-122 MTIFAAIWSHALKFVFYYPLFMSYLWMIGAIIFYWKERKAPPYDQPAPLESYPKVAVLIP CFNEGDNAEETITHALKLDYPHFEVIAINDGSSDNTGEVLDRLAEQHEKLRVVHLAQNQG KAMGLQAGSLMTDAEFLIGIDGDALLDPHAAKWMVRHFLQNPTVAAVTGNPRIRTRSTLL GRIQVGEFSSIVGMIKRAQRTFGRLFTVSGVITAFRKSAVHQVDYWSPNMLTEDIDITWK LQRAGWDIRFEPNALVWILMPETLNGLWKQRLRWAMGGAQVLIKNIDVFTKPKLNFLWPL MFELCLTLVWSYLMLAMALLWLVHFILPVPALAVVSSPFLPYGSGILLGATCLIQFALSK WMDSRYEPHLGKNYFWMIWYPLVFWLITISATIVAFPKVLRRGDEKRARWVSPDRGIRG >gi|333032601|gb|GL891825.1| GENE 66 72962 - 74956 2083 664 aa, chain - ## HITS:1 COG:RSp0287 KEGG:ns NR:ns ## COG: RSp0287 COG0726 # Protein_GI_number: 17548508 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 26 664 38 686 724 515 41.0 1e-146 MITRFASPLLNLTLGLALAGLSGMALANPPKIDASTLTVIGYHEITDTKNALIPQYAVTT QQFTEHVDWLQKNGFHFITVDQLIRAHQGKAALPTKPVLLTVDDGYQSFYQNAYPVIKAK KIPVVLAVVGSWLEPKAGQKVDFSGEEIPRDKILSWGELKEMQDSGFVEIASHSYHLHRG ITGNPQGNSEPAATTRFYDVKTKTYENDSQYQARIYNDLKKNNQLLKEHGIRSPRIMVWP YGRYNMQTVQIAKKLGMPITITLDDGADHAKQSLQNMSRILVEGGMSTNDLAQEIKNREL NLTDNNRPQKIMHIDLDYIYDPDPQQQERNLGHLLDRINAMGVNTVYLQAFSDPDANGSA DMVYFPNRHIPMRADLFNRVAWQIQTRTPVSRIYAWMPLLAWELPKTDPVSKDLVVTEQA KAGEHLNMGYIRLSPFSPEARQTIREIYQDLAKSASFNGILFHDDVTLSDYEDASPDALK AYAKQGLPTDLAKIRENDQDLQKWTAYKTKYLDDFAMQLVEDVRQYEPFLLTARNLYAQV ALKPYAENWYSQSLEESLRRYDFTAIMAMPYMEQVDNADQFYKDMIDRVKKYPNGIKKTV FELQATNWRNNEKVPSTEMAATIHSLYQQGAMHVAYYPDDPIKDHPDVNVMHKAFAEKSS RLVP >gi|333032601|gb|GL891825.1| GENE 67 75193 - 75534 562 113 aa, chain - ## HITS:1 COG:PA3717 KEGG:ns NR:ns ## COG: PA3717 COG0545 # Protein_GI_number: 15598912 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Pseudomonas aeruginosa # 1 113 1 113 113 157 70.0 4e-39 MITELEIIDLKVGEGKEAVKGALITTHYTGWLEDGTKFDSSLDRGNYFECVIGTGRVIKG WDQGIMGMKVGGKRKLMVPAHLAYGERKMGKIIPANSNLIFEIELFDVKTRDD >gi|333032601|gb|GL891825.1| GENE 68 75621 - 76151 673 176 aa, chain - ## HITS:1 COG:RSc0785 KEGG:ns NR:ns ## COG: RSc0785 COG4681 # Protein_GI_number: 17545504 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 170 1 172 182 154 46.0 5e-38 MALKATIYKADLNIANMDDHIYGDYQLTLALHPSETLERLMVRVMAFARFASDSLEFTKD LFETDEPALWQKDLTGQLETWIEVGLPSEDKVKKASARCKTVAIVAYGSQVEDWWKRNSK IKTLSNVQVWQLAPESTAELEQLCERTMQLQLNVMDNEWTLLSDKGQANVVWTQLQ >gi|333032601|gb|GL891825.1| GENE 69 76340 - 77602 1359 420 aa, chain + ## HITS:1 COG:PA0119 KEGG:ns NR:ns ## COG: PA0119 COG1301 # Protein_GI_number: 15595317 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Pseudomonas aeruginosa # 3 417 9 422 449 447 58.0 1e-125 MWQKLKRSLFLQVLCALFLGIAVGLAFHDFSLALKPLGDGFISLIKMLIAPIVFCVVVLG IYGANDIKKMGKVGAKTILYFEVVTSIALILGIIVAYVFKPGVGMNIDITHLDAKDLSTY TERAHDMHTGSEFLLNIIPKTFTAAFANGDILQVLLIAILFGVSLLLIPKHLAELVRQAL EAFSEVFFKIMGLIIRLAPIGVFGSVAYTTAKFGLDSLLQLGYLVLLFYATCILFVVIIL GSILKLTGLNIFKFVGYFKDELAIVLGTASSDSVLPQIMKKLKNLGIKDSTVGLVIPTGY SFNLDGFSIYLTLGVIFIAQACNINLSMHDLLAILLVSLITSKGAHGIPGSALVILAATL SVIPSLPAIGLVLLLSVDWFIGIIRACTNLIGNCVATVVIAHWEKDIDHAQAKQVLNIKN >gi|333032601|gb|GL891825.1| GENE 70 77640 - 78638 1059 332 aa, chain - ## HITS:1 COG:yeiR KEGG:ns NR:ns ## COG: yeiR COG0523 # Protein_GI_number: 16130111 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Escherichia coli K12 # 11 330 4 324 328 196 37.0 4e-50 MKLIAQKTVPTHIISGFLGAGKTTLLQHLLSQKPKGEVWAVLMNEFGQIGVDQQLLPQDQ GYAVKELLGGCLCCSSQLPMHIALARLLSEQKPDRLFIEPTGLGHPSQLFDQLTEPHWQN SLAMRALVTVVDGSRLHDTNWAKQNLYEDQLKAAQIVVVSHADTMTFEDEQALVELKEEY QPYQQQWLKTEHGQLELAQIDVPARLTARSIQPLLKLQKQMTEAEVAKEIHQLPYHYVES AQGYMVAGWKFPKRWKFEFYALLDVLCAQQDWLRIKGIFNTDQGWKTFNFNPEQFNYKSG EEGIDNRIEMISQHEHDWLAFETELLACRIEQ >gi|333032601|gb|GL891825.1| GENE 71 79137 - 79337 338 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLAKTLLATTLALTAASTFAASKHDQAHNTAGEEKVVVSTQEQANTANAASDAVGSASE AAPATR >gi|333032601|gb|GL891825.1| GENE 72 79448 - 79963 490 171 aa, chain - ## HITS:1 COG:RSp0203 KEGG:ns NR:ns ## COG: RSp0203 COG1607 # Protein_GI_number: 17548424 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Ralstonia solanacearum # 16 167 7 160 164 205 66.0 3e-53 MPTLDEMTTVTDDQSELTMSVLMTPDMANFSGNVHGGTILKLLDQVAYACASRYSGSYVV TLSVDKVNFKEPIYVGELVTFLASVNHVGRTSMEVGIRVEAQNIQKRTVRHTNSCYFTMV AVDEHGKPREVPKLNLDTEWKRCRFEAAEHRKVLRLQENHNPSCSMYKKTS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:29:13 2011 Seq name: gi|333032600|gb|GL891826.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld15, whole genome shotgun sequence Length of sequence - 865 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 792 700 ## A1S_2022 putative tail fiber Predicted protein(s) >gi|333032600|gb|GL891826.1| GENE 1 3 - 792 700 263 aa, chain - ## HITS:1 COG:no KEGG:A1S_2022 NR:ns ## KEGG: A1S_2022 # Name: not_defined # Def: putative tail fiber # Organism: A.baumannii # Pathway: not_defined # 1 263 1 263 366 471 98.0 1e-131 MLPFASGIPNLAPNFSQVVGTAAISQGGTGATTAAGARANLGAAASGVNSDISELKGLTT PLSISQGGLGADNAQTARMNLGLGTAAVLASTTSQYDPTPGRALRVGDWGIGAEGSRVSD MVAPLNNGFFRTDDTLTNDTGNSIGPYGFFLHCTRRSMGLYTNGSHSFQLGKAASYSALK YRFNNSGTWSNWFNLLTAQNTTTDGNGFIKAASPVVKLFQSHIELNNDAAKQPITFDKLG TGDYLIKGSLGFAQEGWYIEVPK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:29:29 2011 Seq name: gi|333032599|gb|GL891827.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld17, whole genome shotgun sequence Length of sequence - 30647 bp Number of predicted genes - 30, with homology - 29 Number of transcription units - 13, operones - 3 average op.length - 6.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 70 - 567 461 ## ACICU_01349 hypothetical protein - Prom 619 - 678 4.4 - Term 622 - 668 9.1 2 2 Op 1 . - CDS 746 - 1129 272 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism 3 2 Op 2 1/0.667 - CDS 1207 - 1812 650 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 4 2 Op 3 2/0.167 - CDS 1799 - 2764 569 ## COG3327 Phenylacetic acid-responsive transcriptional repressor 5 2 Op 4 1/0.667 - CDS 2818 - 4107 1504 ## COG1541 Coenzyme F390 synthetase 6 2 Op 5 20/0.000 - CDS 4148 - 5356 1451 ## COG0183 Acetyl-CoA acetyltransferase 7 2 Op 6 7/0.167 - CDS 5369 - 6907 1573 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 8 2 Op 7 12/0.000 - CDS 6910 - 7701 906 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 9 2 Op 8 1/0.667 - CDS 7701 - 8474 795 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 10 2 Op 9 2/0.167 - CDS 8483 - 9544 1277 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 11 2 Op 10 4/0.167 - CDS 9568 - 10068 460 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme 12 2 Op 11 5/0.167 - CDS 10085 - 10840 942 ## COG3396 Uncharacterized conserved protein 13 2 Op 12 5/0.167 - CDS 10853 - 11143 352 ## COG3460 Uncharacterized enzyme of phenylacetate metabolism 14 2 Op 13 . - CDS 11176 - 12114 1069 ## COG3396 Uncharacterized conserved protein - Prom 12323 - 12382 8.4 + Prom 12297 - 12356 12.4 15 3 Tu 1 . + CDS 12380 - 14482 2515 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 14492 - 14534 6.1 - Term 14479 - 14520 6.1 16 4 Tu 1 . - CDS 14526 - 15905 1094 ## COG1760 L-serine deaminase - Prom 16149 - 16208 7.1 + Prom 16155 - 16214 8.3 17 5 Op 1 4/0.167 + CDS 16355 - 17926 1605 ## COG0531 Amino acid transporters + Prom 17941 - 18000 6.2 18 5 Op 2 5/0.167 + CDS 18079 - 19659 1774 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 19670 - 19706 4.2 + Prom 19681 - 19740 6.0 19 6 Tu 1 . + CDS 19818 - 21107 1203 ## COG0477 Permeases of the major facilitator superfamily + Term 21143 - 21175 2.5 - Term 21065 - 21113 0.1 20 7 Op 1 . - CDS 21173 - 21925 488 ## COG2207 AraC-type DNA-binding domain-containing proteins 21 7 Op 2 . - CDS 21970 - 23232 957 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 22 7 Op 3 . - CDS 23232 - 23462 281 ## ACICU_01328 putative NAD-dependent formate dehydrogenase subunit alpha 23 7 Op 4 4/0.167 - CDS 23463 - 24566 1056 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 24 7 Op 5 1/0.667 - CDS 24563 - 25495 947 ## COG3938 Proline racemase - Prom 25573 - 25632 3.4 - Term 25609 - 25639 2.0 25 8 Tu 1 . - CDS 25664 - 26347 651 ## COG1802 Transcriptional regulators - Prom 26485 - 26544 7.2 + Prom 26485 - 26544 8.1 26 9 Tu 1 . + CDS 26765 - 27673 770 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 27691 - 27724 3.1 - Term 27672 - 27719 6.2 27 10 Tu 1 . - CDS 27731 - 28666 1109 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 28793 - 28852 7.3 - Term 29179 - 29225 5.3 28 11 Tu 1 . - CDS 29228 - 29326 88 ## - Prom 29409 - 29468 6.8 - Term 29458 - 29487 2.1 29 12 Tu 1 . - CDS 29527 - 29961 496 ## COG3042 Putative hemolysin - Prom 29995 - 30054 8.0 30 13 Tu 1 . - CDS 30123 - 30575 372 ## COG0789 Predicted transcriptional regulators Predicted protein(s) >gi|333032599|gb|GL891827.1| GENE 1 70 - 567 461 165 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01349 NR:ns ## KEGG: ACICU_01349 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 165 1 165 165 285 100.0 7e-76 MISDQLLKVEETDLNFSTLKNEKPLILNRDVSVLILPSVRQNDAFHTGTIDIFSYLQEEL GENEVELFAFDEEYQELALHSKAHWLGVFLVAQVAVPIFTNVMSDYISNELQAKSDDEIE VNIIIEKNNDKNIKVAYRGKAEHINSVLDKVNELSRDNEVNRHAK >gi|333032599|gb|GL891827.1| GENE 2 746 - 1129 272 127 aa, chain - ## HITS:1 COG:MA0735 KEGG:ns NR:ns ## COG: MA0735 COG2050 # Protein_GI_number: 20089620 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Methanosarcina acetivorans str.C2A # 10 124 22 136 146 76 37.0 1e-14 MQKNETTAVDQFAELLGVEVLHRSFDEARCKLNVKDEHMNALGGVHGGVIFSLADIAFAM ACNAGDAPYTGLQADIRYMSGAKDRVLFATATKVGSSKKFAHYEVLITDGLNNRVALFTS TCYRLAP >gi|333032599|gb|GL891827.1| GENE 3 1207 - 1812 650 201 aa, chain - ## HITS:1 COG:paaY KEGG:ns NR:ns ## COG: paaY COG0663 # Protein_GI_number: 16129361 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Escherichia coli K12 # 1 176 1 176 196 224 60.0 7e-59 MPCYSIDGVIPVVSPDAFVHPTAVLIGDVIIEAGVYVGPFASLRADFGRIHIKQNANIQD SCTVHGFPQSVTLVEEMGHIGHGTTLHGCRIGKNVLVGMNSVILDYAEIGENTIIGANSL VKTKDIIPANVLAMGSPAKVARDLSEQEKKWKTRGTQEYIELAQRCLNSMQEVQPLTSEL DDRLTYKDFSSSNYQIKQDSV >gi|333032599|gb|GL891827.1| GENE 4 1799 - 2764 569 321 aa, chain - ## HITS:1 COG:paaX KEGG:ns NR:ns ## COG: paaX COG3327 # Protein_GI_number: 16129360 # Func_class: K Transcription # Function: Phenylacetic acid-responsive transcriptional repressor # Organism: Escherichia coli K12 # 5 316 2 311 316 218 38.0 1e-56 MSMSAKIQQIIDSVVKNETLSGTSLISTIFGDSVLHRGGNISLASLIQLLELFGFNDRAV RTSVFRLVKNDWLCSDKIGRTSFYRITDSSRSTYLQAEQRIYNDQMKEWDHYWDLILMSS LDTENKALLKKELEWLGFANISTNLMAYPGCNRIELQRLLVDLNMSEQVVVFKAETLQLF NNSVDTIGRMLRTNWPIDELRQRYLQFLDIFREIGVLLMQENEQLEPVQAFQIRTLLIHY YRRILLKDPALPLELLPTDWPAISARTLSMNIYKKVFEPADEYFLSVAATAEGPMPNATA HYWRRFGGLVATNERLNHALL >gi|333032599|gb|GL891827.1| GENE 5 2818 - 4107 1504 429 aa, chain - ## HITS:1 COG:paaK KEGG:ns NR:ns ## COG: paaK COG1541 # Protein_GI_number: 16129359 # Func_class: H Coenzyme transport and metabolism # Function: Coenzyme F390 synthetase # Organism: Escherichia coli K12 # 6 428 7 434 437 588 65.0 1e-168 MDSLTMDNVEQLTLAELRELQTKRLKQTLTFVYENSPVYKKKFDEAGVHPDDFVTLDDLA KFPFTTKQDLRDNYPFGMFAVPQEQIVRLHASSGTTGKPTVVGYTQKDINTWSDIVARCL RMAGLTAKDMVQVAYGYGLFTGGLGAHYGAERLGATVIPMSGGQTEKQVQLIQDFKPTAI MVTPSYCVSIIEKLEQQFGTARNTSLKVGIFGAEPWTNELRREIEERLNIKALDIYGLSE VMGPGVAMQCLGEGEGLTIWEDHFYPEIINPETGEVCKDGELGELVFTTITKEGLPIIRY RTRDLTRLLPGENLAMRKMDKIVGRSDDMLIIRGVNVFPTQIEEQILQVPHLVPNYEILV TKKGHMDTLHIRTEMCHNCTIQANQLAQELMKRIKTMIGISVTVEVVTEATLPRSEGKAK RVIDMRQIA >gi|333032599|gb|GL891827.1| GENE 6 4148 - 5356 1451 402 aa, chain - ## HITS:1 COG:RSc2252 KEGG:ns NR:ns ## COG: RSc2252 COG0183 # Protein_GI_number: 17546971 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 1 401 1 400 400 512 66.0 1e-145 MEDVLICDFIRTPIGRYAGALSAVRADDLAALPIKYLKDKHPNLPWNTVDEVFLGCANQA GEDNRNVARMATLLAGLPDTVPAMTVNRLCASGLDAVGLAARSIKAGEAQFVLAGGVESM SRAPFVQAKPTEAFSRTPEIYDTTIGWRFVNKQLKAQYGTDSMPETAENVAEKYQISRED QDAFALRSQQKTAAAQQNGFFNDEILPVEITDRKKNVNVVNRDEHPRETTLEALAKLKAP FKKEGGSVTAGNASGVNDGAACVLITNREFADTHGLKPLARVIGIASAGVEPKYMGIGPV PAVQKILKQTGLTLDQMDVIELNEAFAAQSLACMRELGLKDDDERVNPNGGAIALGHPLG MSGTRLVITATRELKKRGGRYALCTMCVGVGQGVALILENLN >gi|333032599|gb|GL891827.1| GENE 7 5369 - 6907 1573 512 aa, chain - ## HITS:1 COG:ydbU KEGG:ns NR:ns ## COG: ydbU COG1250 # Protein_GI_number: 16129356 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Escherichia coli K12 # 11 492 8 465 475 390 45.0 1e-108 MTDLDLSRARIAVIGSGTMGIGIAQLAIVNGHTTVLYDLDAQKAQQAVQGLGQTFKKLVE KSKLTEQQADEALARLTVVNQIEALRDADLVIEAVVEKKEVKQSLFKQLAEICSAQTIFA SNTSSISVTAISAGITHPERVVGLHFFNPAPVMKLVEIVQGLKTPNSLCLALKNLMLNWK KIPVLTKSTPGFIVNRIARPFYAEGFRALQEQVTSYDQLDYALKQCGGFAMGPCELTDLI GQDVNFSVTQSVYQEFFYEPRYRPSLVQKELVDAGAWGRKSKQGFYTYNEKNQYQTFQPQ AVVAKPVDAHIQLKGTWSQLPAFLTRLGLKSGSASDDNILQIDDIDLRLSQGESANIHYL SRKVVLMDWHHDFEQAEALVLSHNELCETNDLAKVEAYFAQFGMSVMWIKDHPALLTLRT IALLINEACEASLHGVASLEDIDNAMKYGVNYPKGPYQWLTQMGGAYVLQTLNNLYALYG EEKYRASIYLKQYVAKTQNIATQYSRDMTEFA >gi|333032599|gb|GL891827.1| GENE 8 6910 - 7701 906 263 aa, chain - ## HITS:1 COG:paaG KEGG:ns NR:ns ## COG: paaG COG1024 # Protein_GI_number: 16129355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 6 263 5 262 262 305 60.0 8e-83 MDYQNIIAEEKNGVGYLTFNRPKALNSFNVDMHREVAEVLSQWTKNPDVRCVVISGEGRG FCAGQDLGDRVVDPNAEAPDLGYSIETYYNPLIKTIVNMPKPVICAVNGVAAGAGANIAL ACDLVIAAKSANFVQAFCRLGLVPDSAGTWFLPRAVGHARAMGLTLLGDKLPAETAKEWG MIWDVVEDAELKTKVTELAERLAKQPTFGLSLIKKAIHQSSNNTFDEQMLLERDLQRIAG RSEDYREGVQAFMNKREPNFKGR >gi|333032599|gb|GL891827.1| GENE 9 7701 - 8474 795 257 aa, chain - ## HITS:1 COG:ydbS KEGG:ns NR:ns ## COG: ydbS COG1024 # Protein_GI_number: 16129354 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Escherichia coli K12 # 14 256 12 254 255 254 56.0 2e-67 MQELIKASTAADGVLLLTLNRPEKRNALNNATLQCLCELLEEAEHNAQVKAVVLTGNAQC FAAGADLSELAAMDAVSLQLDIRPKLWQKIDAFSKPLITAVNGYALGAGFELVLHSDMVI CGENARFALPEIGLGMLPGAGGTQRLARLVGQQLTMRWAMTGEMISAKQAEQHGICSQVV PTELTVEYAVQLAAKIAKQAPLAIRVIKQSIKSIHETTLSQGLKFERQNFVWLAATKDRN EGINAFFEKRKPVFRGE >gi|333032599|gb|GL891827.1| GENE 10 8483 - 9544 1277 353 aa, chain - ## HITS:1 COG:paaE KEGG:ns NR:ns ## COG: paaE COG1018 # Protein_GI_number: 16129353 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 1 352 1 351 356 333 49.0 3e-91 MSQFVPLKVKSITPQTDQAICIAFDVVPEQQEQFQFQPGQHLTIRHLTEAGEIRRCYSIC SYAGKEDISIAVKKIDQGQFSNWANDHLKVGDVLEVMPPQGVFFQKAAKMGGQNYLGVAA GSGITPILSIIKQVLFEQPEANFTLLYGNRSWKQTMFAEQIMDLKDQFKERFQLINIFSR EFNDSELMNGRIDAEKLKQLFDFEVLETNFDHVFACGPDEMMNAVENTLPNFGIAKERIH TERFHTGQARKRSVEADANRKEEKVNIILDGRELIVSVAQDDESILDAALRAGADLPYAC KGGVCATCRCKVLSGEVDMFLNYSLEEDEVEKGYVLSCQTLPKGSNVRLSFDE >gi|333032599|gb|GL891827.1| GENE 11 9568 - 10068 460 166 aa, chain - ## HITS:1 COG:paaD KEGG:ns NR:ns ## COG: paaD COG2151 # Protein_GI_number: 16129352 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Escherichia coli K12 # 8 166 14 167 167 172 52.0 4e-43 MQMIRHCIDQCWDVLQTVSDPEIPVLSVVDLGMIRGVEINDQQEIIVRLTPTYSGCPATD MLKAQIVEAFTAEALTPVKVMVDLSEAWTTDWMSEAGKKKLQVYGIAPPEGLAHQCGTHV HLTNGVECPRCKSRHTRLLTEFSSTACKALYKCQDCLEPFDYFKCI >gi|333032599|gb|GL891827.1| GENE 12 10085 - 10840 942 251 aa, chain - ## HITS:1 COG:ydbP KEGG:ns NR:ns ## COG: ydbP COG3396 # Protein_GI_number: 16129351 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 6 251 4 248 248 259 53.0 5e-69 MNHSVLSKFLLHIGDSQLVLSQRLAEWCGHAPELEIDIALANIGLDLLGQARNFLTLAGQ YDEAKRDEDQLAYFRTEREFLNLLLCEQPNGDFAQTIVRQWLMDHYHLHLFTALAQSSLP ELSALAVKSLKEVKYHIRFSTSWMERLSLSTDEAHQRVQDGLDNLWRFTAELFELSADEK ALVAEGVIPDFSNEKEQWNQTIADELKRFELNVAVNGAYRRGAKQGLHTEHLGYLLAEMQ CIQRTYPGMTW >gi|333032599|gb|GL891827.1| GENE 13 10853 - 11143 352 96 aa, chain - ## HITS:1 COG:ynbF KEGG:ns NR:ns ## COG: ynbF COG3460 # Protein_GI_number: 16129350 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized enzyme of phenylacetate metabolism # Organism: Escherichia coli K12 # 7 96 6 95 95 136 72.0 8e-33 MEDKNNWSLYEVFVRSKQGLSHRHVGSLRAPDDEIALQHARDVYTRRNEGISIWVVRSEL IKSSQPDEKAEFFDPSLDKVYRHPTFYHIPDGIEHM >gi|333032599|gb|GL891827.1| GENE 14 11176 - 12114 1069 312 aa, chain - ## HITS:1 COG:ydbO KEGG:ns NR:ns ## COG: ydbO COG3396 # Protein_GI_number: 16129349 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 6 312 5 309 309 501 77.0 1e-142 MENNYQKFEQNIANEITIEAKDQMPDAYRKTLIRQIGQHGHSEIVGMLPEGNWITRAPTL KRKAVLLAKVQDEAGHGLYLYSAAETLGADRDDMMEKLINGKMKYSSIFNYPTLTWADVA AIGWLVDGAAIVNQVALCRTSYGPYARAMVRICKEESFHQRQGFEAMMALANGTAEQKQM AQDAVNRFWWPALMMFGPSDEHSPNSAQSMAWKIKRFSNDELRQKFVDNTVPQVLQLGLE VPDPDLKFNEETGHYEFGEIDWHEFNEVIAGRGPCNHERIEARRKAWENGKWVRDAAVVY AKKQQLEANKVA >gi|333032599|gb|GL891827.1| GENE 15 12380 - 14482 2515 700 aa, chain + ## HITS:1 COG:maoC_1 KEGG:ns NR:ns ## COG: maoC_1 COG1012 # Protein_GI_number: 16129348 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 23 524 1 500 500 494 55.0 1e-139 MLEQAHLEGTSTDTDFQQSEHQLPHLASYVYGTWHSSDEELRTVYHAITGEAIYAVSSHG VDMKRVVQYAKQNGSELANWTFHQRANALKQIAQHLLERKEDFYKLAYATGATRKDAWID IEGGIQTLFAYSSLVRRELNDEKIITEDSWIQLSKNGTFGAKHILSPKAGVAVHINAFNF PIWGMLEKIAPTLLAGVPCIVKPATDGAQLTQAVVKAIEETHVLPKGALQLICGQTYDLL EQLGPQDCVTFTGSAYTGQKLRNHPHLNKYSIPFSMEADSVNSAILSPEANEETVDLFVR EVFREMTTKAGQKCTAIRRAFVPENLLATVQEKLTAKLAKVVVGDPQKEETTMGALASIK QKHDVAEKVAELSKDAKIVFGGNDSFTFNADHPEKGAFFAPTLLVCEQPLQATNVHTTEA FGPVCTLMPYQNIEELADLVSRGEGSLVASVVKNNDENIEQIIQKIAPWHGRVHVLDAES AKESTGHGSPLPHLVHGGPGRAGGGEELGGIRAVKHYMQRTAIQGSPNSLTQITHSWTAG SKVNEDRVHPFKKSFDELVIGERLLTARRTVTEADIVNFACLSGDYFYAHTDKIAAAESF FGERVAHGYFIVSAAAGLFVDAAQGPVIANYGMDNLRFVEPVKIGDSIQVELTCKQKTPK PQKDASQPAHGVVVWDIKVKNQRGELVATYDILTLVAREA >gi|333032599|gb|GL891827.1| GENE 16 14526 - 15905 1094 459 aa, chain - ## HITS:1 COG:PA5379 KEGG:ns NR:ns ## COG: PA5379 COG1760 # Protein_GI_number: 15600572 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Pseudomonas aeruginosa # 1 459 1 458 458 593 65.0 1e-169 MFISVFDLFKIGIGPSSSHTVGPMRAAYSFVDDLLKQDDLQATVRVQVKLYGSLSATGVG HATDKSVLLGLMGFDPEHIDTQVSTSLIEDVLENKAIQLNQQKSISFDYKHDVLFLDESL PYHPNAMELIAYNRAQEILYAETYYSVGGGFIVSERQLTHTQTETNDVKVPYPFHSAAEL LSLCRTHHLSVSELMLENEKSWRSEAEIRSKIMEIWKVMQQCIHNGLINEGILPGGLNVK RRAKKIHDKLLNKKNSNLIVTTFHAMEWVNLFALAVNEENAAGGRVVTAPTNGAAGIIPA VLYYYVTFSKDFSEDKVVRFFLSAAAVGILCKLNASISGAEVGCQGEVGSACAMASAGLA EILGASPEQVEHAAEIGLEHNLGLTCDPIGGLVQVPCIERNAIAAVKAINAAQMALHDDD EHFVTLDKVIQTMKETGRDMSEKYKETSKGGLAVNAIEC >gi|333032599|gb|GL891827.1| GENE 17 16355 - 17926 1605 523 aa, chain + ## HITS:1 COG:BS_yveA KEGG:ns NR:ns ## COG: BS_yveA COG0531 # Protein_GI_number: 16080500 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 5 520 7 519 520 530 56.0 1e-150 MTSQFKKQLSLMDLTFIGLGAIFGSGWLFSASHVASQAGPAGILSWIIGGFAVLILGIIY CELGAALPRAGGIIRYPVFSHGPLQGYLLGSVTVIAFSSLIAIEVVAAREYAAAWFPSLT AVHDGVRTPTTIGWLFQFALLCVFFALNYYSVKTFAIANNLISALKFAVPVLVMVALLYH FKPANFSMTEFAPMGAHGVQGAVSAGGIIFAYLGLTPIISVASEVKRPQFTIPFALILSV VLATIIYVVLQVAFLGAVPTDMLANGWSGLSDKFPLPYRDIAMLLGLGWLALLVVSDAII SPSGCGNIYMAATPRVIYAWSNSNTFFRIFTRVDPKSGIPRYALWLTFALSVFWTMPFPS WDKLISVVSAALVLSYALAPVTVGALRRNAPELERPFYVKGFTVLGPLAFVIASFIVYWS GWNVISWLLGAQIVLFALYVIFKRYVPTQEVSLAQQLKSSTWLLVYYILMILASYLGSFG DGASHLLAAPFDTLFVMVISLGCYYWGIRSGLPKALIKNDDEA >gi|333032599|gb|GL891827.1| GENE 18 18079 - 19659 1774 526 aa, chain + ## HITS:1 COG:PA2217 KEGG:ns NR:ns ## COG: PA2217 COG1012 # Protein_GI_number: 15597413 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 1 526 1 526 527 731 72.0 0 MLNITGQNFIAGQRSSAGSKFVLSYDAATDEALPYQFAQATPEEIDQAAQAAALAYPAFR QTTPEQRAVFLETIASEIDALDDQFIATVCQETALPEARIRGERGRTTGQLRLFAQVLRR GDYLGARIDLALPERQPLPRPDLRQYKIGVGPVAVFGASNFPLAFSTAGGDTASALAAGC PVIVKAHSGHMATAESIANAICSAIEKCAMPKGIFSMIYGQGVGEPLVKHPAIKAVGFTG SLKGGRALCDLAAARPEPIPVFAEMSSINPMILLTAALKVRGDKIATELSGSVVLGCGQF CTNPGLIIGIKSPEFSQFLDQFKAAMAQQPPQTMLNKGTLRSYEHGLKELLAHDKIEHLA GQPQQGQQAYPQLFKADVSLLLERDELLQEEVFGPTTIVIEVESAEQLALALSGLRGQLT ASLIAEPQDFENFATLIPLLEEKAGRLLLNGYPTGVEVCDAMVHGGPYPATSDARGTSVG TLAIERYLRPVCYQNYPDHLLPLALQNANPLGIARLVNGEMSKAAL >gi|333032599|gb|GL891827.1| GENE 19 19818 - 21107 1203 429 aa, chain + ## HITS:1 COG:ECs2778 KEGG:ns NR:ns ## COG: ECs2778 COG0477 # Protein_GI_number: 15832032 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 6 421 21 436 438 269 37.0 1e-71 MTTTLKKVVAASMVGSVAEWYEFFLYGTASALVFGELFFQQTGNAIDGILAAFALYAVGF LARPLGGLVFGHYGDKIGRKKLLQISLIIVGITTFLMGCIPTFHQIGYWAPTLLVILRLI QGFAFGGEWGGAVILVSEHSPDDRRGYWASWPQTGVPLGNLVATLVLLLLSKNLSPEQFL DWGWRCAFWFSAVVVLIGLWIRKNVDDAEVFKEAQAKQQLLEKQQLGIIEVLKYHKKSVI AGIGARFAENILYYMVVTFSISYLKLVVHKDTSQILLLMFGAHLIHFFIIPFMGHLSDIF GRKPIYLIGAVLTAFWGFVGFPLMDTGNDWLIMLAIVLGLFIESMTYSPYSALMTELFPT HIRYTALSFCYQVAPIMAGSLAPLIALTLLKEFNSSIPISLYLVAASLISIVSILLVKET KGRSLAFKD >gi|333032599|gb|GL891827.1| GENE 20 21173 - 21925 488 250 aa, chain - ## HITS:1 COG:PA1261 KEGG:ns NR:ns ## COG: PA1261 COG2207 # Protein_GI_number: 15596458 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 30 246 1 217 224 278 57.0 5e-75 MTLVQIPKLTTTLEDFLKNLESIEPLFDALSSVVFFIKNTEARYVFVNQTLVNRCGLKDK TAILGKTSSEVFPHSLGKIYTSQDLQVIRRGKKLTEQLELHLYAKNQSGWCLTYKEPLFD ADGNLVGIAGISNDLNVPENTHPAFYKMVQVEEYIKKNYAETITLAHLTAIAGVSVAQLE RYCKKIYHLTPRQMISKIRLQVATELLATDLPITQIGLRCGYTDHSAFCRQFKLHTGMSP TLYRASIKNI >gi|333032599|gb|GL891827.1| GENE 21 21970 - 23232 957 420 aa, chain - ## HITS:1 COG:PA1266 KEGG:ns NR:ns ## COG: PA1266 COG0446 # Protein_GI_number: 15596463 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 1 392 1 392 417 361 54.0 2e-99 MEKQYDVVVVGAGPAGLSAAIAAAESGGRILILDNNPQAGGQIWRAGPIFPVPEMAQQKY QQIKAHSNIEFMFGAKIVAAPFAGQLLVERPHDSLNLSYRQLILCTGARELFLPFPGWTL PGVTGVGGLQALIKAGTPVKNERIVIAGSGPLLLASADTAKKAEAQVLYVAEQAASSSVR KFALQLWRWPSKIIQALSLPYRLYQPNSYVVEAIGQERLERVRLQTPKGIIEIECDRLAC GFGLVPNTQLGQLMGCQIKDNAITVDDYQRTSQPQVWAAGECTGFGGSELAMVEGSIAGY AAIGQNEKARQLFAQRQRYRLFAHLLEKSFKLRAELKTLARPETIFCRCEDVTFDKVAER NSWIDAKLHTRCGMGACQGSTCATAAACLFDWQLPNSRPPLLPTRVKSLMAMSTSPLNQK >gi|333032599|gb|GL891827.1| GENE 22 23232 - 23462 281 76 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01328 NR:ns ## KEGG: ACICU_01328 # Name: not_defined # Def: putative NAD-dependent formate dehydrogenase subunit alpha # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 1 76 76 130 100.0 2e-29 MIQLFINGQPVSVIEGTSVAAALAQAKSYSRLSVCGEKRTPFCGMGVCQECRVNINGLRV LACQTLCQQDMKVETQ >gi|333032599|gb|GL891827.1| GENE 23 23463 - 24566 1056 367 aa, chain - ## HITS:1 COG:PA1267 KEGG:ns NR:ns ## COG: PA1267 COG0665 # Protein_GI_number: 15596464 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 1 367 1 366 371 410 56.0 1e-114 MRTDAIVIGAGIVGAACAYELARQGLNVQVLDARIGGATAAGMGHLVIMDDLDAELKLSH WSVQLWHELGHELSEDCAYRQTPTLWLASSPEEMQIAEEKYQRLTAQGVRCQLRNSDEVH QLEPHLKQGLYGGLEVFDDGILYAPCAAEWLLKKFPHKVQVQQAKVIHIEENRVQLSDGT WLEAAHIVLANGIHATDFFPVLPIEPKKGHLAITDRYPELNVKHTLVALAYAASTQATSG ISVACNIQPRPTGQLFIGSSRQFNTVDPTVEPEVFTRVLKEAVDYFPALADLNVIRAWTG FRAATPDGIPVIGRHPALESVYLAVGHEGLGVTTATGTAKLIVSHICGLTFDIDPEPFLP HRFIGAA >gi|333032599|gb|GL891827.1| GENE 24 24563 - 25495 947 310 aa, chain - ## HITS:1 COG:PA1268 KEGG:ns NR:ns ## COG: PA1268 COG3938 # Protein_GI_number: 15596465 # Func_class: E Amino acid transport and metabolism # Function: Proline racemase # Organism: Pseudomonas aeruginosa # 1 309 1 313 314 464 70.0 1e-130 MKTVKILDSHTGGEPTRLVLEGFPDLGTGDMESRRKILSEQYDHFRRATMLEPRGNDVLV GALLCKPVNPKASAGVIFFNNTGYLGMCGHGTIGLVASLAHLGKIQVGTHLIETPVGDVE ATLHEDHSVSVRNVPAYRYKKAVEVNVEKYGKVTGDIAWGGNWFFLINDHGQRVASDNLD QLTEYAWTVRQALTAQGITGKDGQEIDHIELFASDTEADSKNFVLCPGKAYDRSPCGTGT SAKIACLAADGKLEPGKLWKQASIIGSQFIASYEQAGEYVIPTIRGEAYMSAEATLFMDE NDPFAWGIQL >gi|333032599|gb|GL891827.1| GENE 25 25664 - 26347 651 227 aa, chain - ## HITS:1 COG:PA1269 KEGG:ns NR:ns ## COG: PA1269 COG1802 # Protein_GI_number: 15596466 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 6 221 2 217 222 301 67.0 9e-82 MTLPSFNVSNLGAMPSVSEVIVKYIREAIIAGHIAEGEPIRQDEIAKLFNVSKIPVREAL KQLEAEGLVEFIKNRGAIVTRISEEELAQIFEVRVMLETKLIQLAVPNMTEETYKKADEI CNAFIDNMDIGSWTTLNWQLHACLYEPAQRPYMLGLIRSIYDKIERYLRLQMNVSEGKSR ANDEHKEIVKACKAKDVDLAVKLIEEHINGVCQSLYEHLPHHKNVKK >gi|333032599|gb|GL891827.1| GENE 26 26765 - 27673 770 302 aa, chain + ## HITS:1 COG:BH1931 KEGG:ns NR:ns ## COG: BH1931 COG0697 # Protein_GI_number: 15614494 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus halodurans # 20 286 10 267 304 110 32.0 4e-24 MSTPTEAKFSLTYYTGFLSVLFAAFLWGTAGTAASFAKGISPLVIATISVGFGGLIHTFL SLKAIKKDYRKLFDYKTKVLIAVIVSILCPFAFYSSVSLAGVSIGTVISIGCAPLFSVML EWLLDKRKLSLKWLISFILGFLGVVLLSYAGEHSHQHQGVQSERLLGVFFGLLSSLSYAT YSWIMKNLIHKGINSRAAMGVIFGISAVLLLPTLLITATHLFNYPNNIWVALYIPIVPMF LGYLFFSFGLKRIPASQAMTLALVEIPVAALLAVVVVGESLTMNSYLGLVLIFLCVIVLT KK >gi|333032599|gb|GL891827.1| GENE 27 27731 - 28666 1109 311 aa, chain - ## HITS:1 COG:BMEII1006 KEGG:ns NR:ns ## COG: BMEII1006 COG0329 # Protein_GI_number: 17989351 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Brucella melitensis # 2 308 3 309 320 478 77.0 1e-135 MSNIFTGCIPALMTPCTPNREPDFDALVKKGHELIEAGMSAVVYCGSMGDWPLLTEAQRQ EGVARLVAAGIPTIVGTGAVNSKEAVSHAAHAEKVGAQGLMVIPRVLSRGASPTAQKAHF SAILKAAPSLPAVIYNSPYYGFATRADLFFELRREFPNLIGFKEFGGAADMRYAAEFITS QDDSVTLMAGVDTQVFHGFVNCNATGAITGIGNALPKEVLQLVDLSKKAAAGDAKARRLA QELSSALEVLSSFDEGTDLVLYYKYLMVLNGDKEYTLHFNETDALSESQRKYVETQYELF RTWYRNWSAEI >gi|333032599|gb|GL891827.1| GENE 28 29228 - 29326 88 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMQAMFFFSAGAVFGYCYRHYDAKVKKANDSK >gi|333032599|gb|GL891827.1| GENE 29 29527 - 29961 496 144 aa, chain - ## HITS:1 COG:STM1275 KEGG:ns NR:ns ## COG: STM1275 COG3042 # Protein_GI_number: 16764626 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Salmonella typhimurium LT2 # 14 75 14 75 83 65 48.0 3e-11 MKKIIFLGLALVSLTACSSVQHKDSTPPKIGSPNPASQYCVEQGGKLEIRNEANGQVGYC HLPNGQVVEEWKLFRDNQANCVSEEAQKLVGLSGLTDDQIKQKTKSEIVRKVAPGQPMTM DYRSNRVTVTIDPTSKKITQATCG >gi|333032599|gb|GL891827.1| GENE 30 30123 - 30575 372 150 aa, chain - ## HITS:1 COG:ECs5045 KEGG:ns NR:ns ## COG: ECs5045 COG0789 # Protein_GI_number: 15834299 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Escherichia coli O157:H7 # 9 148 11 150 154 186 66.0 1e-47 MSERNQSRLLTVGEVAKRSGVAVSTLHFYESKGLIKSIRTNGNQRRFTLVVLRYIAIIKI AQKVGIPLDEIKQALSKYPMGSKLTAQQWKELSLDWRKNLDERIQKLTRLRDEMDWCIGC GCLSLEQCPLRNPNDVLGQEGAGPRILERP Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:29:48 2011 Seq name: gi|333032598|gb|GL891828.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld20, whole genome shotgun sequence Length of sequence - 30852 bp Number of predicted genes - 28, with homology - 28 Number of transcription units - 14, operones - 7 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1386 1118 ## COG0534 Na+-driven multidrug efflux pump 2 2 Op 1 . - CDS 1493 - 2647 850 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 3 2 Op 2 . - CDS 2675 - 3985 1174 ## COG2733 Predicted membrane protein 4 2 Op 3 . - CDS 3999 - 4562 443 ## AOLE_00545 hypothetical protein 5 2 Op 4 . - CDS 4622 - 5161 467 ## COG3803 Uncharacterized protein conserved in bacteria - Prom 5257 - 5316 6.0 + Prom 5233 - 5292 6.2 6 3 Op 1 . + CDS 5330 - 6907 1597 ## COG2918 Gamma-glutamylcysteine synthetase 7 3 Op 2 . + CDS 6922 - 7437 466 ## COG1495 Disulfide bond formation protein DsbB + Term 7449 - 7498 11.5 + Prom 7453 - 7512 6.4 8 4 Op 1 . + CDS 7603 - 10929 3290 ## COG3501 Uncharacterized protein conserved in bacteria 9 4 Op 2 . + CDS 10939 - 12963 1149 ## COG0739 Membrane proteins related to metalloendopeptidases 10 4 Op 3 . + CDS 13004 - 13675 408 ## gi|332872973|ref|ZP_08440934.1| conserved domain protein + Term 13684 - 13713 2.1 - Term 13672 - 13701 2.1 11 5 Tu 1 . - CDS 13708 - 15051 1444 ## ACICU_03558 PGAP1-like protein - Prom 15213 - 15272 5.8 + Prom 15157 - 15216 4.7 12 6 Op 1 7/0.000 + CDS 15264 - 15845 449 ## COG3150 Predicted esterase 13 6 Op 2 . + CDS 15860 - 17743 2260 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Term 17889 - 17926 0.2 14 7 Tu 1 . - CDS 17774 - 17911 77 ## gi|332872977|ref|ZP_08440938.1| hypothetical protein HMPREF0022_00537 - Prom 18149 - 18208 4.6 15 8 Tu 1 . + CDS 18202 - 18996 814 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 19011 - 19046 2.0 16 9 Op 1 1/0.000 - CDS 19100 - 19603 368 ## COG3194 Ureidoglycolate hydrolase 17 9 Op 2 . - CDS 19600 - 20610 1180 ## COG4266 Allantoicase - Prom 20762 - 20821 3.8 + Prom 20696 - 20755 5.6 18 10 Tu 1 . + CDS 20810 - 21967 1196 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 21977 - 22012 5.1 - Term 21957 - 22005 9.2 19 11 Op 1 1/0.000 - CDS 22021 - 22746 866 ## COG3248 Nucleoside-binding outer membrane protein - Prom 22775 - 22834 4.2 - Term 22823 - 22849 -1.0 20 11 Op 2 . - CDS 22869 - 24236 399 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 21 11 Op 3 . - CDS 24261 - 24584 223 ## COG2351 Transthyretin-like protein 22 11 Op 4 . - CDS 24581 - 25084 462 ## ABAYE0133 OHCU decarboxylase - Prom 25110 - 25169 1.9 23 11 Op 5 . - CDS 25184 - 26149 808 ## COG0726 Predicted xylanase/chitin deacetylase - Prom 26200 - 26259 4.0 + Prom 26154 - 26213 8.7 24 12 Tu 1 . + CDS 26402 - 26752 484 ## A1S_3350 hypothetical protein + Prom 26807 - 26866 4.8 25 13 Op 1 . + CDS 26911 - 27456 630 ## ABBFA_000134 hypothetical protein 26 13 Op 2 . + CDS 27469 - 28236 1053 ## ACICU_03545 hypothetical protein 27 13 Op 3 . + CDS 28265 - 30079 1330 ## COG4232 Thiol:disulfide interchange protein - Term 29876 - 29914 -0.9 28 14 Tu 1 . - CDS 30071 - 30757 535 ## COG2199 FOG: GGDEF domain Predicted protein(s) >gi|333032598|gb|GL891828.1| GENE 1 3 - 1386 1118 461 aa, chain - ## HITS:1 COG:RSp1213 KEGG:ns NR:ns ## COG: RSp1213 COG0534 # Protein_GI_number: 17549434 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Ralstonia solanacearum # 13 449 9 445 455 353 46.0 6e-97 MPPRQSLIHQQNLWKTFFVFLLPLIATNILQNLSGTINTIFVGQMMGVDAIAAVSVYFPI LFLLLAFIIGISTGTTVLVGQAWGAQDIEKVQSVVGSTLFMTIIGGIITAIIGVFFAHDI LELLGTDPKVMHLSLPYVQWMLAGSPLLFVYIIYTSILRGVGDSTTPLLALALTSVIGVI ITPILLKGYFGFPALGIIAPAIASIISYIAILIFLAIYLNKKKHPLRPNRQLLQHIRHNS ALSKIILRLGVPTGIQMITTSMAGLVIVGLVNRFGAHATAAYGAVNQVLNYIQFPAISIS IAASIFAAQAIGAGKSDLLARVTRTALGMNFLFTGALIALGYLFSKYLMALFITDPTVVV LGQQLLFIVLWAILFFGAGAIFASIMRASGTVTVPMLINISAILFIEMPCAYWFSSMWGL KGIWVAYALAFVSLCIIQGLYYQFIWKKKKIKGKRPLNTPS >gi|333032598|gb|GL891828.1| GENE 2 1493 - 2647 850 384 aa, chain - ## HITS:1 COG:PA3798 KEGG:ns NR:ns ## COG: PA3798 COG0436 # Protein_GI_number: 15598993 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pseudomonas aeruginosa # 4 381 2 379 382 451 55.0 1e-126 MLQLQSKLPAQGVTIFSTMTAMAQRLGALNLSQGFPDFPAPPALLEALSQATLAGHNQYP PGDGILALREQLALQFQQRDHLQLDPVTQITITPGATIAIFCAIQACINTGDEVIIFDPS YDSYGPSVELAGGKAVHIALQAPDFKVNWQQVKDRINDKTRMIVVNTPHNPTGTIWSKQD WLELIELIQDKNIVVLSDEVYEHLVFDGQQHFSALHFPELRERSFVIGSFGKTFHVTGWK TGYCVASPDLMRLFRQIYQYVNFCGTTPCQIALAQYMQQYPEHIQELSQFYQTKRDRFNQ AIHNSRFLLKPSQGTYFQNLDYSQIRPDLNDVEMCQFLAEQHKIVAIPVSVFYQQAPESL RLIRFCFAKNDETLQKAGEILNQC >gi|333032598|gb|GL891828.1| GENE 3 2675 - 3985 1174 436 aa, chain - ## HITS:1 COG:mll1146 KEGG:ns NR:ns ## COG: mll1146 COG2733 # Protein_GI_number: 13471231 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 13 428 24 424 431 168 26.0 2e-41 MNMAEEVHHAPNLKRSKYFATMALIIVVVLWIGLLIANRFLPEYTDLIHILMLGAEAGVV GGLADWYAITVLFRNPFGKLPIPKFLRDHTEIIPRNKARIAESMGRFVQENFLSPQVVER SLEKTDLSLAIGQWLASPQNNTQVVQLIQQTVPKVFEFVSQEQIANFVQNNSVQWVRNTQ VNKLASEMLRAVLENDFHQDVLQRGLDIAHEWVVQNPDKTRELTRKMFKALGVWSLAKGA SWIGIDVQQRTIDSLVEKVESMLADHEHPWRQEIETIAHSLMLELANPESIASQRLNSGK DALLDSPQVLNFISGAVTILCDAIKEDLMKEDSGIAMNLRAAIQQLGENLVQNVKVREVL NKEMTGLAMNFTDQYSHKIIRYVSERIHEWDSREMIGKIENEVGGDLHMIRVNGVVVGAF IGLTLGVIRAAIESIL >gi|333032598|gb|GL891828.1| GENE 4 3999 - 4562 443 187 aa, chain - ## HITS:1 COG:no KEGG:AOLE_00545 NR:ns ## KEGG: AOLE_00545 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 187 1 187 187 302 93.0 5e-81 MKYLSLCLALGTAITLSACSTIPSKPKTFDQLGQFSAYPLNAQTFRISFQADSNMSYGAA EEITLVKSAQTTVQKGFRFFKVLNDPSNQSQKPPRQAVVYPSAPSFYPYGYYRRYPGFWH DPFYGFPQVVNIDPVQVSYTIECYRDQKQAPQDAFDATLILKSIGQKYGLSPTGELLPPP EPPVKQK >gi|333032598|gb|GL891828.1| GENE 5 4622 - 5161 467 179 aa, chain - ## HITS:1 COG:BMEI0803 KEGG:ns NR:ns ## COG: BMEI0803 COG3803 # Protein_GI_number: 17987086 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Brucella melitensis # 4 172 34 202 208 160 47.0 1e-39 MNDQDILNFWFSPEHRSLWFAKSEDFDAKIRDQFTDVHRQATRAELWSWRKTPEGRLAEI IVLDQFSRNIYRDQPESFAYDGLALALSQEAISLQLDAQLNPEQRSFLYMPFMHSESKLI HEFALKLFQRLGNEINLSFEKKHKVIIDRFGRYPHRNAILGRVSTPEETEFLLEPNSSF >gi|333032598|gb|GL891828.1| GENE 6 5330 - 6907 1597 525 aa, chain + ## HITS:1 COG:PA5203 KEGG:ns NR:ns ## COG: PA5203 COG2918 # Protein_GI_number: 15600396 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Pseudomonas aeruginosa # 25 525 25 518 527 390 44.0 1e-108 MSQPTTPSQSVIPAWVDSSLLQGMLRGIERESLRMQSNGFLSQELHPKALGSALTHPKIT TDYSEALMEFITSPQPTIGDALHELTDIHAVVHRHLENGEKLWPLSMPCMLDDNEERIRL AQYGTSNIGRFKTLYRRGLGIRYGRRMQTISGVHYNLSFPDSLFSALQAHETDEKLKALS LQDYRSHRYFGLIRNFIRLTPLVMFLVGASPSVCRCFLTGHEHHLLPLIKGSYYLPYATA LRMGRLGYQNSAQKSLGIHYNNLTGYLDGLQKAVHSPYPPFSRLGLNDASGEPLQINDHV LQIENEYYSLVRPKQVPQAGETPSQALKNRGVGYVELRAVDVNPYSAIGVNETTAGFLEA LALYCLLSDSPELLCPEQDLIEKNQTEVVNRGRAPNATITDLNGSYHIEDWARQHISKMQ DCARLLDQTYATDLYSSALAVMQERIDEVDETLSAHVIDDTLKHGGTWSFGSHMAQLHAE TYEKHEISAETLQYFEQLAVQSLQQQEQLEQDSQISFDQYLEQYR >gi|333032598|gb|GL891828.1| GENE 7 6922 - 7437 466 171 aa, chain + ## HITS:1 COG:XF0340 KEGG:ns NR:ns ## COG: XF0340 COG1495 # Protein_GI_number: 15836942 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond formation protein DsbB # Organism: Xylella fastidiosa 9a5c # 20 145 23 148 173 108 40.0 4e-24 MRLSYRLVSGLLVLASIVGMSFALYLEHVKGLEPCPLCIFQRVGLMAMGFVALIAFLHNP VSNAIKRFYAFLAGVAILWSVGVAGRHVWLQHLPPDQVPSCGPGLNYLIDALPMKTVLQE VLSGSGECAAIDWTFLGQSLPVWSLAYFLLLLLVCLWQLFRFYPVFKTAKK >gi|333032598|gb|GL891828.1| GENE 8 7603 - 10929 3290 1108 aa, chain + ## HITS:1 COG:RSp0518_1 KEGG:ns NR:ns ## COG: RSp0518_1 COG3501 # Protein_GI_number: 17548739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 4 595 4 586 586 310 33.0 1e-83 MLFNIFSVLEKIGLNAQKRAIHVQFSNELLNHQVFLQRIEGQHQLNGGLMAELICLSTNA QIALKQFIGVQVAVDQVTDSGQLFRTTGIVTEASYGQSDGALTLYKLTIEDATNLWHKRR NSRVFMNKSIVEITEVLFKEWQEKSPLFAASLSLDLGGLSQNYDIRPFTMQHNEADYDFL TRLWRSEGVSWLIDESELFVPHFTAPIQAQKLRLIDDNNQYQALARRSIRYHRSSATEYQ DSITGFVAVRSLQPTAVHVQRWQPDALAQEEGNGSVVTTHTHSDNFDSATLSLEQAWHVS PAWMQDLKGEDQATASSSSQLEKLNQHFTDMHASRAKYFKAYSSVRDTQVGYWFNLREHP EIDQHEGADQEFLIIAKNFYNQNNLPKDLQQQVSQLLTQSRWDQHGYDDIERQGNELTLI RRQIKTAPEYNPEQHRPIAYPQRAKVVGPEGETIHVDEWGRIKVRFLFTRSDDHGHDGGA GSNDNDTDSAWVDVLTPWAGEGYGARFLPRIGEVVVIDFFDGNIDRPFVTGRIHEAQRSP TKFDVKGQLPDTKKLSGIRSQEINGSGFNQLRFDDTTGQISTQLQSSHAATQLNLGNLSH PKEQATSQGRGEGFELRTDAWGAVRAGKGMLISTYAQEQAIADHLEAAQAQSLLSQGYES MKMLSEVAAKQQTDALNVINRLPKFIQSLELKTTGQALNSTVNLFKEGINNDPIHALKDC GGFIQDIGALGGNAKGVVDEFNSFFSDAKDAVENLKAFIENVEEHGPDIVKGKLASIKDR IHKNPFESIQEVGKVLTNVETKDFDLMSTCGTFSKGSKLEVSPSKALSSLQGFMEGYTQG LESSSDTQQQEQGKIFRQALMLLASPNGIALTTPENIILQASQDIAESASGSINLSAQKN IIGHAQDKISLFAAQKGLRAYAAKGKLELQAQDDAIEAIAKKVIKLISTEDKIELTSPKE IVLTAGGSQLKINANGVFSTTGGKFESKAGQHLFTGGAKVSYEVPELPKNGPYAVDFLFA SLAGNGIENAKIQLYEPDKKEIIWEGKTDLRGKSNLSLQNESKRYEALIGFDDWSSIFDD EDDYEEEHEEEFEIGEHGMQAEENNLEE >gi|333032598|gb|GL891828.1| GENE 9 10939 - 12963 1149 674 aa, chain + ## HITS:1 COG:TM0409 KEGG:ns NR:ns ## COG: TM0409 COG0739 # Protein_GI_number: 15643175 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Thermotoga maritima # 537 649 158 242 271 65 38.0 4e-10 MSKIYIVKSGDTLWGISKKHHISVKELARINSLSGRMIHNLRIGQKIYLQNDVNNTNNFE TQLKIILMDLSFKPILKATIQLEFDGKKIIRNTKNSIFEDINIQDHSKGLKVFFKNLNGT FDLIADHKVLPLGRKVLKLTSRKMKVEGSHYAKDGILNETVNQIMSNLKKVGKPIVESIS TTSNKDELKNKQPPLKIPEEKIEQKRTDNGNSTHIIAAQFTEDNFLLKPVNNKYRAYIVN AAKRHGFTPHSLAAVIEAEAAKIKKTGEWNTNSKANSSTAAGLTQFLDETWLAMCKDKSS LVGQYVMNNPKLTIQQKLNLRFNAEMAIDAAAAYAISNFKSSGLPYQKLTEPSSIAKFAY LLHHEGATGGKNFVLNTLSQERAKKLLFTQFGKNGAKQAADFLNRYKGDAKAAYGAWLRN YIDGHINIYQYVVDKSKTSGINLSTDETIKLLKGQTISTPAPKISTTTNNQQVTNVSTIE KSESKIRINTSQAPTNNVGGDNKWHNPLADCKLRTAGLANAKGATFGKVRNNGTKNHQGV DLQANPGTKIYAVCGGVIAFAGATGGAYGKVIVLKVDINDLPEKQKKYAQTKLTKNKYVY FFYAHLSVIDVDKGDPVDTGEVIGKTGATGNANKMTTISKGAHLHFEARSAPLLGVGLDG RFDPIPFINANLPY >gi|333032598|gb|GL891828.1| GENE 10 13004 - 13675 408 223 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332872973|ref|ZP_08440934.1| ## NR: gi|332872973|ref|ZP_08440934.1| conserved domain protein [Acinetobacter baumannii 6014059] hypothetical protein ABTW07_3768 [Acinetobacter baumannii TCDC-AB0715] conserved domain protein [Acinetobacter baumannii 6014059] # 1 223 21 243 243 383 100.0 1e-105 MIACSVSFNICYAKENSEWNDYLQDSTQINSPIEYIDSYNKYTVLNPNLKIKLVDFGNIN KIKKDIKYSLKKYGVQILNRKEVYNIFEGKVPLKSNVDFTLLYNDKNIVAFRIRENSNID YVKEPYKNFTANAYFYNLINNKFIEVPVLNSDSEDKSKSTDILQGDQLTYDSKKGQYIYL ANIKSYKTGKTQSIKTIFNSNLKCISSTLGCETIGVLPATKAN >gi|333032598|gb|GL891828.1| GENE 11 13708 - 15051 1444 447 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03558 NR:ns ## KEGG: ACICU_03558 # Name: not_defined # Def: PGAP1-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 447 1 447 447 933 100.0 0 MPSLTPLHETYCKWDRTPPSQADVLEGLAQLFSTSLNGVHELIQVINIEVLKNAFGISAQ NAKNFQKRPSVQKAYQFSYGALQKYGSCFLAPGLRRIIEKFPTLHEKPLTPTLHFLVGVL NGIFGDYLLKQHSPLALPMVLYDHYGAIQQGELAGRIVILVHGLCMNHLTWSNAHYGGIG ERLLAQRDHNTMLYLNYNTGRRISANGRSFSNLLEDLVQRNPRITSIDLIGHSMGGLVSR SALFYGKQNMYQWIHMVENLVCIGSPHHGAVLERFGFALQDRLGAFPFVGLIGQLVNIRS NGILDLRHGSVRDDDWEYMDARIGMMDDNRAPAPLPSHINTFLVAGTLEFEKVRNKALTV IGDYLVSVKSALGEHPNPRFQLKVPDSHKAVFYGLNHFEIQYHSSVAEQITRWLYPHVND YVQDGIQTHIIDMPNYTLEDLEGIVET >gi|333032598|gb|GL891828.1| GENE 12 15264 - 15845 449 193 aa, chain + ## HITS:1 COG:PA4968 KEGG:ns NR:ns ## COG: PA4968 COG3150 # Protein_GI_number: 15600161 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Pseudomonas aeruginosa # 2 187 7 189 206 112 32.0 6e-25 MNIIYLHGFNSSSSSIKGLSLKQYCSELDINVHLPDLNRSPEQVVAQVSELIESLQEVAL VGSSLGGFFATYFVAKYNIPAVLINPAMQPWKLFDELFQVENMPYKVNDQWSIDHVKFRQ LEQLELKQPENADKILVLLQQGDEILDYRQAQRYYSAATPSSLILTDAHGNHAMEDFEEK LPLVIEFFAHTIK >gi|333032598|gb|GL891828.1| GENE 13 15860 - 17743 2260 627 aa, chain + ## HITS:1 COG:PA4967 KEGG:ns NR:ns ## COG: PA4967 COG0187 # Protein_GI_number: 15600160 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Pseudomonas aeruginosa # 1 627 1 629 629 886 68.0 0 MTQYTAQSLEVLSGLDPVRRRPGMYTDTSRPNHLAQEVIDNAVDEALAGHADKICVTVYK DGSLSVEDNGRGMPVDIHPEYGQSGIEIILTKLHAGGKFSTDNYQFSGGLHGVGISVVNA LSTRVEVEVQRQGNLYQMAFEQGEPVAPLAVLEGKAPKRATGTTVRFWPEAKYFDSPKFA LKALKHNLKAKAVLAAGLKITYIDQINDEKIEWQFENGLVDYLMDELQDREILPNPAFVS SGQADRAACEFAICWNVEGGEQVQESYVNLIPTAQGGTHVNGLRSGVTEALREFCELRNL LPRNLKLSAEDVWDGVNYILSLKFQEPQFSGQTKERLSSREAANIVLNIAKDAFALWLNQ HAEIAMQLAEMAISKAGRRLKAAKKVERKKIVSGPALPGKLADCVGQTREESELFIVEGD SAGGSAKQARDKNFQAIMPIRGKILNTWEVSSDEVLASQEVHDIAIAIGVDPGSDDLSEL RYGKICILADADSDGLHIATLLCALFVKHFPALVEEGHLYVAMPPLFRIDIGKDVHYALD DEELETILKNVKGNKNPQITRFKGLGEMNAIQLRETTMDPNTRRLVQLDLDDAHLTAGLL DKLLAKKRAADRKQWLEQKGNLADITV >gi|333032598|gb|GL891828.1| GENE 14 17774 - 17911 77 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332872977|ref|ZP_08440938.1| ## NR: gi|332872977|ref|ZP_08440938.1| hypothetical protein HMPREF0022_00537 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_00537 [Acinetobacter baumannii 6014059] # 1 45 1 45 45 77 100.0 3e-13 MFFKEQNKTAFLEVWLSKDKGSPKIKKITHKLIIFNKVYELSGAG >gi|333032598|gb|GL891828.1| GENE 15 18202 - 18996 814 264 aa, chain + ## HITS:1 COG:RSc3138 KEGG:ns NR:ns ## COG: RSc3138 COG1028 # Protein_GI_number: 17547857 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 262 1 260 262 245 50.0 6e-65 MDLQLKGKTAIVTAATAGIGLAIAKTLAKEGTDVIITGRTQDKLAAAVAEIEANAPLGKV CGFLADLSTSEGVETLISQHPYTDILVNNLGYYEAKPFTEITDEDWWHMLNVNVMSGVRL SRHYFPKMLENNWGRVIFMSSEVGAFTPPDMVHYGVSKSALLAVSRGMAELTKGTGVTVN SVLPSATRSEGIMDYLRQTAPRPNMTDQQIEAHFFEIYRPSSLIARMIEADEIASMVALL ASPLGSASNGAAVRVEGGTFRSIL >gi|333032598|gb|GL891828.1| GENE 16 19100 - 19603 368 167 aa, chain - ## HITS:1 COG:PA1514 KEGG:ns NR:ns ## COG: PA1514 COG3194 # Protein_GI_number: 15596711 # Func_class: F Nucleotide transport and metabolism # Function: Ureidoglycolate hydrolase # Organism: Pseudomonas aeruginosa # 3 155 1 151 169 151 51.0 5e-37 MIMKNIQIQPLTIENFQPFGEVICCDGHDFFHINDAHTERYHALVETEIEGEAKAGISIF RNIKASVLPMEISMLERHPKGSQAFIPLQQQKFLIVVAPALDENTPDISKLCAFVSDGKQ SINYRAGTWHHPLLTFEAPSDFAVVDRIGGGANCDIFQFPHPIKITV >gi|333032598|gb|GL891828.1| GENE 17 19600 - 20610 1180 336 aa, chain - ## HITS:1 COG:RSc3274 KEGG:ns NR:ns ## COG: RSc3274 COG4266 # Protein_GI_number: 17547991 # Func_class: F Nucleotide transport and metabolism # Function: Allantoicase # Organism: Ralstonia solanacearum # 12 333 11 335 336 357 51.0 1e-98 MATLHAPAFELPEILNTKTNLADARIGAQVIECSDDFFAEAKRMLQFEAPIFVEDKFDDH GKWMDGWETRRKRHAGYDWCIVKLGVSGKISALDIDTTFFTGNYPASASLEACYAPNGDL TGAKWQSILENTELGPSQHHIFMVNNDAIFTHIRLNIFPDGGVARLRVYGDVHIQVTDHE QTLDLLALENGGRVIAYSDAHFGHPRNLINPGRGVNMGDGWETKRRRAPGYDWCILALGK SGKIEKIEIDTAHFKGNFPAEVSIQAVYLENATDAQLIPQSMFWSYLLEAQPMQMDHIHE YMNEILQHEKVSHIRINMIPDGGISRVRLWGKIAKS >gi|333032598|gb|GL891828.1| GENE 18 20810 - 21967 1196 385 aa, chain + ## HITS:1 COG:SA2099 KEGG:ns NR:ns ## COG: SA2099 COG0654 # Protein_GI_number: 15927886 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Staphylococcus aureus N315 # 13 343 13 333 374 145 29.0 1e-34 MNVVIIGAGMGGLTTGIALKKFGHQVRIFEQTEKILPVGAAISLWSNGVKCLNYLGLTEK IAKLGGQMDDLAYVDGLTGDVMTQFSLRPLIEEVGQRPYPVARADLQNMLMDEFGRDQIY LGKKMVSLEDKTDFVEVHFADGSSTQADLLIGADGTHSMTRAYVLGQQVQRRYAGYVNWN GLVEISEDLAPAQQWTTYVGEGKRASLMPVADGRFYFFLDVPLPAGLENNRDEYKKLLKQ YFANWCQPVQQLIERLDPQKTNRVEIHDIEPFTQFYKGRVVILGDAAHSTTPDIGQGGCQ AMEDAIYLARSLQINTLGLEDALRRYQNKRNERANELVLRARKRCDVTHMKDETVTQAWY AELRREQGGHIMQGIISNIVGNPLD >gi|333032598|gb|GL891828.1| GENE 19 22021 - 22746 866 241 aa, chain - ## HITS:1 COG:PA0165 KEGG:ns NR:ns ## COG: PA0165 COG3248 # Protein_GI_number: 15595363 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Nucleoside-binding outer membrane protein # Organism: Pseudomonas aeruginosa # 24 241 39 278 278 132 34.0 9e-31 MQLKQLAATCALLSATAMVQAKPIWQDFSVTGLYGENYEVVDDKETTITLEYAAKVKYAD VFFFMDRMRGEDDYKSTYFELSPRLSLGEVSGKKLTYGPIKDVLISTTWESNTQNGNNFD NFLYGFAVDLDIPYFQYANLNFYRANNEKTDDDYQMTFVYGIPFKIASEDFLVDGFLDWS TAEDDHASELNWTTQWKWNVGKHISPDTRLYLGIEHSVWNNKFGIKGADENNVSALVKYH F >gi|333032598|gb|GL891828.1| GENE 20 22869 - 24236 399 455 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 13 393 8 385 447 158 28 4e-38 MNHQQKNAISPEHEYLGISKSFAYGLQHVLTMYGGIVAPPLIIGTAAGLSAAQVGMLIAA ALFVGGLATLIQTIGTKYLGAKLPLVQGVSFAGVATMVAIITTGGGLPAVYGAVIAASLI GLCLAPYFSKIIRFFPPVVTGCVITIIGLSLLPVAIRWMMGGNNKAPDWGSVENISLALL TLGIVIILNILPQASIRRLSILLAIVAGTTLAYFMGFGDFSQVSSGAWLQFPHLFAFGLP TFELSAILSMLIVTLVIMTETTADIIAVGDIVGTQVDSKRIANGVRADMFSSAIAPIFGS FMQSAFAQNVGLVAITGIKSRFVVAAGGVILIILGLLPVMGRLIAAIPMPVLGGAGLVLF GSVTASGIRTLAKIDYNDQKNLIIVATALSAGMIPIINHEFYAHFPVWVQTLFHSGISST CIFAILLNLLFNHLPSFRSSRTPHLSQTINTRNTH >gi|333032598|gb|GL891828.1| GENE 21 24261 - 24584 223 107 aa, chain - ## HITS:1 COG:BH0760 KEGG:ns NR:ns ## COG: BH0760 COG2351 # Protein_GI_number: 15613323 # Func_class: R General function prediction only # Function: Transthyretin-like protein # Organism: Bacillus halodurans # 2 107 5 119 119 97 42.0 5e-21 MISTHILDTNLGKPAAQVEVKLFHAATHELIATAITNQDGRVSDFGIKNLGKGAYQLEFE VAPYFSSQQIKTFFPRVCIQFFIEDTNQHYHIPLLISPFAYSTYRGS >gi|333032598|gb|GL891828.1| GENE 22 24581 - 25084 462 167 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0133 NR:ns ## KEGG: ABAYE0133 # Name: not_defined # Def: OHCU decarboxylase # Organism: A.baumannii_AYE # Pathway: not_defined # 1 167 19 185 185 283 99.0 2e-75 MFLAEFNQAPPDQLKTLLNNCVHIPVWAEKIISERPYSSTSVLLGYAEQLSHTWSWQEIQ AALATHPKIGERQAKKQLNAKEQNFSAQEQAGISLDEQTQQALLQGNIEYEQKFGFIFLI KAAGLSSDEILKKLHQRLQNNLAIEKTIVHEQLAAIALLRLSQEVQA >gi|333032598|gb|GL891828.1| GENE 23 25184 - 26149 808 321 aa, chain - ## HITS:1 COG:RSc2120 KEGG:ns NR:ns ## COG: RSc2120 COG0726 # Protein_GI_number: 17546839 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 20 318 14 316 328 407 59.0 1e-113 MSESYLSGAELIEQIQKSPYSRDLIGYHGQPPEVKWPNNAKVAVQFVLNYEEGGEKHIEH GDEGSEQFLSEIIGAASYPAKHMSMDSMYEYGSRAGFWRIHSEFQRRKLPMTIFGVAMAL VRNPYIVEAIKQADYDVVSHGYRWLHYQESDLEVEKQHMEQALSVLENLFGNKTIGWYTG RDSPNTRQLLAEFPQIQYDSDYYGDDLPFWTTLTDTAGASRPHLIIPYTLECNDMKFCSP GGFNSSEQFFQYLKDSFDVLYAEGETAPKMMSIGMHCRILGRPGRFKALQRFLDYIEMHD HVWVCRRQDIAEYWYKNHINQ >gi|333032598|gb|GL891828.1| GENE 24 26402 - 26752 484 116 aa, chain + ## HITS:1 COG:no KEGG:A1S_3350 NR:ns ## KEGG: A1S_3350 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 116 4 119 119 205 99.0 5e-52 MNIEIRTDKNIHNSERLITYVRAELTQEFQRHSERITHFSVHFSDENGDKGGDKDIHCMI EARPSGLKPVAVHHKAGNIDASIHGAIEKLKRSLEHTFEKKEHPRGSQPEFIDDEV >gi|333032598|gb|GL891828.1| GENE 25 26911 - 27456 630 181 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000134 NR:ns ## KEGG: ABBFA_000134 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 181 3 183 183 325 100.0 7e-88 MLTTQQQALIKAIEELELAQVQKLLAEGLDPNFIDPEQGPPVSIICDGIFKWWEDVSEAY EAGTPLSQEEKQQALQVYLDILEALIQAKANVHLWDAEEFYGPLWDAASSACAPAVQRLL DEKVDPNTRDEEGLTILSSISQLFFDCDFDEIDWSEALQEERETLELLRRHGAKMSKELT T >gi|333032598|gb|GL891828.1| GENE 26 27469 - 28236 1053 255 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03545 NR:ns ## KEGG: ACICU_03545 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 255 1 255 255 477 99.0 1e-133 MRTFQILTFALTAVAAGSTFAAEFSFDRPGSGFGTGITPVGKLAWEQGLPSATYTESTVD GVKEKTVTVNEDMLFRTGLADGLELQLGWQGPAWTQTKRAGKKTDNSGFGDVSIGLKKAI DLNDENLTMAVLAEAVIATGNDEFTAHDDIYSLSSAVAYKYNDLLDTSITMRYEVQNSNW AVTAIPTINYKIAGKLSGYSEFVYRKAESQDYQYGLGTGLVYAVNNRTQLDANIGVDLEG QDKSYKGGLGMAFLF >gi|333032598|gb|GL891828.1| GENE 27 28265 - 30079 1330 604 aa, chain + ## HITS:1 COG:PM0221 KEGG:ns NR:ns ## COG: PM0221 COG4232 # Protein_GI_number: 15602086 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol:disulfide interchange protein # Organism: Pasteurella multocida # 1 601 11 582 586 301 33.0 2e-81 MKKLISQGIIYFLVAATFVLSQFVFAEDKLLSPEQAFSFSVESPQSHTAKLSWKIQPNYY LYQHKFTVQQGNQPLTLNLPKAVSQYDENYGQSQVYYHQVNFQIKTKPSEHYTVTWQGCA KDRICYPPQTIEFQTDADGLVGLQNQAGAAPKRLLDLANTQASSSTESLENQSSATQAEG AAPEIAQDQVWSAKLIEHSLWYGVLLFLGLGMLLAFTPCSLPMLPILTSLIIRDHKGLKA WTIALTFVCSMALVYAGLGLIASSAGLNFQRWLQQPATLIAFSLLFVVFALNLFGLFELR LPQTWLNRLDRIQSMQQGGTLVGAGVMGVVSALLVGPCMTAPLAGTLLFISQTQNQWQGA LLLFCLGFGMGIPLLIASVLGAKFLPKAGDWMHQIKVIFAFLMLGLSLYFIRPLLPDWGM QVLSLLLGLAFIIYALYQFFWKKGQLQWLYALLLLLVTPFVVYNQYQHIHNRSLQNSEHM AEWHVATTAADFQKILVAAPADRPIVVDVYADWCVACQPIEHRILKASEVQTALAPYYLI KLDLSHYDQSHEALLKQWNILGPPTYLFLNKQQQEIRSLRLTGAFSQQELLQQLASLSKV KDSN >gi|333032598|gb|GL891828.1| GENE 28 30071 - 30757 535 228 aa, chain - ## HITS:1 COG:aq_035_2 KEGG:ns NR:ns ## COG: aq_035_2 COG2199 # Protein_GI_number: 15605636 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Aquifex aeolicus # 33 221 52 247 251 127 35.0 2e-29 MTGVISYAPLFNFTAMRHAQTNPFWLGSMLFFIMPILVACFILFEILLTQWRQRETYIQR LSQIDPLTNVLNRRSLNTHLEALHEQQFDYAVILLDIDHFKKINDIYGHHQGDQVLIEIA QCLSENLRNEDIIGRFGGEEFILLLPHTDIIQAEKIAERCRQALQELTIFNNQNIQIHVS ASFGISSSAFANDPYLVIRQADQALYAVKASGRNQVRTFHQLPQIKSI Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:30:29 2011 Seq name: gi|333032597|gb|GL891829.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld21, whole genome shotgun sequence Length of sequence - 1275 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 68 - 367 247 ## Psyc_0016 IS3/IS911 family transposase OrfA + Prom 762 - 821 2.6 2 2 Tu 1 . + CDS 859 - 1233 176 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|333032597|gb|GL891829.1| GENE 1 68 - 367 247 99 aa, chain + ## HITS:1 COG:no KEGG:Psyc_0016 NR:ns ## KEGG: Psyc_0016 # Name: not_defined # Def: IS3/IS911 family transposase OrfA # Organism: P.arcticum # Pathway: not_defined # 1 98 1 98 98 97 64.0 2e-19 MSKKHKTYTTEFKAEAIKLIEANQGNVSETARQLSISMQTLSNWNTKAKAGTLAGTKQYS PDLNALLEENKKLKQQLKIAEMEREFLKKAAAYFAKESQ >gi|333032597|gb|GL891829.1| GENE 2 859 - 1233 176 124 aa, chain + ## HITS:1 COG:ECs1311 KEGG:ns NR:ns ## COG: ECs1311 COG2801 # Protein_GI_number: 15830565 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 1 124 149 272 272 137 51.0 4e-33 MTTQLVCNALNMAIHNQKPTKELIVHSDRGSQYCSHEYRNILEQYGFQGSMSKRGDCYDN APIESFWGILKNELVHHYNYQTREEAKADIIKYIELFYNHRRIQKGLGFKTPNQMAEDFY KLAA Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:30:38 2011 Seq name: gi|333032596|gb|GL891830.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld22, whole genome shotgun sequence Length of sequence - 22103 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 14, operones - 7 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 440 - 516 83.6 # Arg ACG 0 0 - Term 574 - 608 -0.9 1 1 Tu 1 . - CDS 639 - 1331 775 ## COG3560 Predicted oxidoreductase related to nitroreductase - Prom 1364 - 1423 8.0 + Prom 1410 - 1469 5.3 2 2 Op 1 . + CDS 1556 - 2053 528 ## ABBFA_000477 hypothetical protein 3 2 Op 2 . + CDS 2093 - 2734 790 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Term 2761 - 2797 3.5 4 3 Tu 1 . - CDS 2811 - 3605 664 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 3642 - 3701 3.5 + Prom 3628 - 3687 4.9 5 4 Tu 1 . + CDS 3711 - 4625 599 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 4589 - 4631 1.2 6 5 Tu 1 . - CDS 4646 - 5893 1037 ## COG1295 Predicted membrane protein - Prom 6131 - 6190 7.8 + Prom 6065 - 6124 7.0 7 6 Tu 1 . + CDS 6181 - 6774 532 ## COG0655 Multimeric flavodoxin WrbA + Term 6786 - 6827 9.9 - Term 6764 - 6821 6.5 8 7 Op 1 . - CDS 6827 - 7402 781 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 9 7 Op 2 . - CDS 7475 - 8188 641 ## ABSDF0472 hypothetical protein - Prom 8241 - 8300 2.7 10 8 Tu 1 . - CDS 8346 - 9017 768 ## ACICU_03229 hypothetical protein - Prom 9088 - 9147 6.3 + Prom 9129 - 9188 4.7 11 9 Tu 1 . + CDS 9248 - 10132 800 ## COG0810 Periplasmic protein TonB, links inner and outer membranes + Term 10133 - 10187 2.2 - Term 10129 - 10166 0.2 12 10 Op 1 17/0.000 - CDS 10222 - 10698 409 ## COG0319 Predicted metal-dependent hydrolase 13 10 Op 2 10/0.000 - CDS 10708 - 11796 1191 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 14 10 Op 3 . - CDS 11834 - 13285 471 ## PROTEIN SUPPORTED gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein - Prom 13342 - 13401 7.5 + Prom 13336 - 13395 5.3 15 11 Op 1 . + CDS 13574 - 15517 2085 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 16 11 Op 2 . + CDS 15575 - 16237 294 ## COG3719 Ribonuclease I + Term 16300 - 16347 1.8 + Prom 16336 - 16395 5.8 17 12 Op 1 . + CDS 16449 - 17435 1311 ## COG0039 Malate/lactate dehydrogenases + Term 17455 - 17495 5.0 + Prom 17443 - 17502 4.5 18 12 Op 2 . + CDS 17598 - 17843 323 ## ABBFA_000493 hypothetical protein + Term 17848 - 17895 14.5 - Term 17827 - 17889 18.1 19 13 Op 1 . - CDS 17892 - 18419 424 ## ABBFA_000494 hypothetical protein 20 13 Op 2 . - CDS 18487 - 19092 457 ## COG3751 Predicted proline hydroxylase - Prom 19164 - 19223 3.6 + Prom 19128 - 19187 7.1 21 14 Op 1 . + CDS 19210 - 20067 879 ## COG2961 Protein involved in catabolism of external DNA 22 14 Op 2 . + CDS 20109 - 20942 888 ## COG1183 Phosphatidylserine synthase 23 14 Op 3 . + CDS 20961 - 22028 641 ## ACICU_03216 hypothetical protein Predicted protein(s) >gi|333032596|gb|GL891830.1| GENE 1 639 - 1331 775 230 aa, chain - ## HITS:1 COG:PA2575 KEGG:ns NR:ns ## COG: PA2575 COG3560 # Protein_GI_number: 15597771 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Pseudomonas aeruginosa # 35 230 4 199 200 238 59.0 1e-62 MSFFAKLFGFKQKTTAQEDVALKAAQELEPSNETSFIELIKNRRSIYAIGNNLSQSNDEI EKLIQEAIRHSPSAFNSQSSRAVILFGQSHHKFWNTVLEVLKTIIPAEAVSGTEQKIQSF AAGAGTVLFYEDQSVIKSLQEQFELYADNFPIWSEHSTAIAQFAVWNVLAEQNIGASLQH YNPIIDEKINTSFNIPAEWKLRAQLVFGSIEGAAGEKAFIDDESRFKTFG >gi|333032596|gb|GL891830.1| GENE 2 1556 - 2053 528 165 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000477 NR:ns ## KEGG: ABBFA_000477 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 165 1 165 165 290 100.0 1e-77 MTEQKSALSLRYYLNLEESQDGFGLVTFGKKQFTRFLTPVISIAIIIWGLYLGFSGVGRY YVALGVFFLVMQGLMRYWLLPMMFKRQFVRYQFGKSEQGIDLYQDYFELYAAGRKQAVQY SEVQTFAKGKLTYMLELKNKTVIIVPKRAFAQASDQTIFENTFKK >gi|333032596|gb|GL891830.1| GENE 3 2093 - 2734 790 213 aa, chain + ## HITS:1 COG:PA0318 KEGG:ns NR:ns ## COG: PA0318 COG0179 # Protein_GI_number: 15595515 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Pseudomonas aeruginosa # 7 203 19 215 221 184 46.0 1e-46 MKTRPSKIVCVGRSYADHVKELNNAMPGRPVLFIKPPSSLIGLDEGISWNPAWGSCHFEC EFVLRIDQPLKGETDPQKVLQAIGAVTLGLDLTLRDLQNELKDKGQPWERAKAFDGSCVL ADWVDVSEITDWEETRFTFHINDELRQDGNTALLMFNIAYLLVDINQVFSLEPGDVIMTG TPAGVGPLNAGDQLKMTLKGATQDFVWETFVKA >gi|333032596|gb|GL891830.1| GENE 4 2811 - 3605 664 264 aa, chain - ## HITS:1 COG:PA4288 KEGG:ns NR:ns ## COG: PA4288 COG2207 # Protein_GI_number: 15599484 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 20 260 9 256 267 192 41.0 4e-49 MKKSAQRVQDFQEIPAHNAIPDLLWFRVRNAPAETVYPQHAHAWGEFIYAFSGVLEVNID QINYLTPPPYGIWLPPYTKHSGINRNEVTHATLYVHESLCQKLPQKAGILLTSSLVPALL DHLRQNPHDETQVEYIRLLQVLLDQLIQAELVGSYLPTTDHPALAKILNDLHQCPADNST LQELAERINMTERTLARYSQKELGMSLHEWRQRLKVMKAMTMLNQGKTIESIAFDLGYAS ASAFIYMFKRWMGFTPDQFRKLYQ >gi|333032596|gb|GL891830.1| GENE 5 3711 - 4625 599 304 aa, chain + ## HITS:1 COG:PA1411 KEGG:ns NR:ns ## COG: PA1411 COG0697 # Protein_GI_number: 15596608 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 4 298 2 295 303 214 46.0 1e-55 MEERKNLDTRASALMVLLCMVLGLQQVVLKIAAPDISPIMQIALRSGLSAVLVLPLLWRD HSIHLFSYRQCKAGALVALFFSLEFYFVTQALKFTSTSHTVVLLYTAPIFVALGLHWKFP TERLNRAQWGGIALAFMGIILTFYPTTTATNAPALAQVLLGDLYALMAGLAWALSTIIVR LSPLAQAPATQTLFYQLFGCFVLLLLIAFLTNQTTIHFTTLAILSLSFQTLIVSFASLLL WFWLLRNYLASRLGIFSFLTPLFGVLFSILLLEEKLEIKFIFGSILVLSGIVIMSLKQGK ANSS >gi|333032596|gb|GL891830.1| GENE 6 4646 - 5893 1037 415 aa, chain - ## HITS:1 COG:PA0951 KEGG:ns NR:ns ## COG: PA0951 COG1295 # Protein_GI_number: 15596148 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 18 374 10 364 411 230 37.0 4e-60 MLERFLKKLPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISS IKALEPARQQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSI ETVFNRIWRVKETRSGIVGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLD GAFLLWLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALFETLKNLFSFVMSNFT SYEIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKEQKRHPVLMLLDILELF YKKQKLGESVSDKEALEILGRGEVGRWPAYVLLLEEQNLVKRTDKDEYVLVRNLSQVDFW SFFTALPYPLPLRQDVSNVHDDDEWMEKIGPALVESNDYLAAKLSIPLSTIFEEK >gi|333032596|gb|GL891830.1| GENE 7 6181 - 6774 532 197 aa, chain + ## HITS:1 COG:PA0949 KEGG:ns NR:ns ## COG: PA0949 COG0655 # Protein_GI_number: 15596146 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Pseudomonas aeruginosa # 3 197 4 198 198 233 60.0 1e-61 MQPYILVLYYSKYGSTKEMAHLIANGVESAGVNVKIRTVPNIATVVTEAEPSIPEEGDIY CTLEELANCAGLALGSPTRFGNMASEMKYFWDQTTSLWLNGALHNKPACVFTSSGSMHGG QESTLLTMLPPLFHHGMMILGLPNSIPALSNTKTGGTPYGASHVSGPRHDQSLSQDEKIL CEVQGKRLGEIVKKLHS >gi|333032596|gb|GL891830.1| GENE 8 6827 - 7402 781 191 aa, chain - ## HITS:1 COG:PA5298 KEGG:ns NR:ns ## COG: PA5298 COG0503 # Protein_GI_number: 15600491 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Pseudomonas aeruginosa # 1 189 1 189 190 263 76.0 1e-70 MHALEQKILTEGIVLSDQVLKVDAFLNHQIDPVLMQQIGKEFAARFKDAGITKIITIEAS GIAPAIMAGLELGVPVIFARKYQSLTLKDDLYRAKVFSFTKQTESTIAISNKHINSSDKA LVIDDFLANGQAALGLIDLIHQANAEVVGVGIVIEKSFQPGRDLLLEKGYRVESLARVQS LADGTVTFVKE >gi|333032596|gb|GL891830.1| GENE 9 7475 - 8188 641 237 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0472 NR:ns ## KEGG: ABSDF0472 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 237 1 237 237 419 100.0 1e-116 MATKFLKSFSIATGISTTLLIASFSSHALAMSPFQANYQFTYNNKGMGSATRALSQQGNN WTYQFTAKAGGIASASETSKFSFANGKIGSQSFSRTSKILIHNNTMSINFNPGNKTISTK KDDKARSFAWQAGVLDELNAELQIREDLKNGSLKSSYPLADAKEVENRRFVKQGNEKIKT SYGTFDTVKVVLQHKKPERSTIFWLAPKLDYLPVKVSHIDGKTSYGLLLTSYTGKTN >gi|333032596|gb|GL891830.1| GENE 10 8346 - 9017 768 223 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03229 NR:ns ## KEGG: ACICU_03229 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 223 1 223 223 403 100.0 1e-111 MQTLFSSLVKRLHKVYRKAEAFIEEERDFTLSQTFLNATLERYVTNNVEFLDDLHADLYH DWLRLYATMHVKGLETTLSVDLKLIQMEFNKEQQLIVFEQISNTQIVEAKYKNFWQKIAV KAAIFYYHKILKKDPLGMILERFDVAQEKDDLIFLDLNRWFAKKASIIETLGKVHINYAR VREAELVVFGNVNLAALLFRDQDDDSEDELGDTEITPIQQKDV >gi|333032596|gb|GL891830.1| GENE 11 9248 - 10132 800 294 aa, chain + ## HITS:1 COG:PA0406 KEGG:ns NR:ns ## COG: PA0406 COG0810 # Protein_GI_number: 15595603 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein TonB, links inner and outer membranes # Organism: Pseudomonas aeruginosa # 18 285 41 311 319 138 35.0 1e-32 MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFVLLIHFAMPAPSEQSTKEIAISIRPT EDVIKHADFLAQADQQGSGAFREAHRMSSNSPAPMPSDASTGEAQLETLEKVQQQRELKF EEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVASLEAQYLQRQQDFSRQQKIKT VDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL LESSGHPVLDEAAKASVRRGAPFGRFDVNMKDISELRIIRTWRFDPAEAEFEVH >gi|333032596|gb|GL891830.1| GENE 12 10222 - 10698 409 158 aa, chain - ## HITS:1 COG:PA3982 KEGG:ns NR:ns ## COG: PA3982 COG0319 # Protein_GI_number: 15599177 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 1 156 1 148 160 120 50.0 1e-27 MKISLSLQQDFQSPELELKRAQLKKIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYR EKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHG VLHLLGYDHETSDEDAEEMEGLEIEILAKLNIANPYQE >gi|333032596|gb|GL891830.1| GENE 13 10708 - 11796 1191 362 aa, chain - ## HITS:1 COG:PA3981 KEGG:ns NR:ns ## COG: PA3981 COG1702 # Protein_GI_number: 15599176 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Pseudomonas aeruginosa # 21 330 22 323 340 374 63.0 1e-103 MTAAIRRTVTFPEISMERLKSILGAYNGHLKQIEQRLDVKITHRGDVFYIDGEIDAVGRA EALLQRLYEETEASQQISADLLHLLIQSSQTERNFELVGEEMDEHDAPMDVYFQTRKGRI NPRGANQKRYVQRILQSDISFGVGPAGTGKTYLAVAAAVDMLERNEIQRILLVRPAVEAG EKLGFLPGDLTQKIDPYLRPLYDALYEMLGFEKVAKLIERQVIEVAPLAYMRGRTLNHSF VILDEAQNTTPEQMKMFLTRLGFGSRAVITGDITQVDLPRGQQSGLAHALRVLENIKEIH ITRFHSRDVVRHQLVQKIVEAYEGWDGEQQRLNAEARAERKARQEALIAENDTAADLQHQ DA >gi|333032596|gb|GL891830.1| GENE 14 11834 - 13285 471 483 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|183179613|ref|ZP_02957824.1| conserved hypothetical protein [Vibrio cholerae MZO-3] # 1 430 1 418 470 186 29 2e-46 MTVQTFIPNGAKAASENTVTQPTHTTDVSIKKLYIETQGCQMNEYDSHRMADLLGDSHGY VLTNNPNEADILLMNTCSIREKAQEKVFSELGRWRKLKEQNPDLVIGVGGCVASQEGDNI QKRAPYVDMIFGPQTLHRLPQMLDQHHAQVEKPKKEKIKLVDISFPDIEKFDFLPEPRVE GFKAFVSIMEGCSKYCSFCVVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQNVNG YRGETFEGGICTFPELLRLVAEIPGIGRLRYTTSHPLEFSDELIQCYEDLPQMVSHLHLP VQSGSNDVLKAMKRNHTIDVYIDKIAKLRKIRPDMHLSSDFIIGFPGETDENFAETLQFI KDLDFDHSYSFVYSKRPGTPASDLPDTTPEHVKKERLAQVQQVIKQSSIEKTDAMLGKIE RVLIEKVSDQDPNILVGTADNTRLVTFVGDASWIGRFAEIEITEIKTLNLVYGELLNLEP DVA >gi|333032596|gb|GL891830.1| GENE 15 13574 - 15517 2085 647 aa, chain + ## HITS:1 COG:NMB1949 KEGG:ns NR:ns ## COG: NMB1949 COG0741 # Protein_GI_number: 15677779 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Neisseria meningitidis MC58 # 300 644 276 616 616 238 41.0 2e-62 MKNKYAHRSWLGAVCLLGCSLSYAAEEQFNDALNAANSGNTALLDQYQLAMQNDVLGYYP EYWKLNTNLGFQSPTSIVSFAQRYPQSAMAEKLAADYVEEKVKQADFASAQPILPYVSNP DQAENCALAQVRAKSGDALVFAEYKDVWLATESQPESCIGLGRMMLSSPLMSAQDKQQRL WVQLRAGLSGQALATAQTLGLNLSLAQLNQIQANPLNYLWSAPKTNDVDYAYLIFALGRL ANNDLGNAFANVQRVAQGTPESVQKYLYRTVAYIGGTTVMKNNFNREVLQYFDASYGYPL SPEEAEIYARQAIRFSAWESLIRAIDSMSVSQKQEDRWQYWLARATEQRGDSNSKNTAQR IYKKLAESGDDYHNLLAKDRLGVRYNHQPYNDEPTASDLRRLDQNIHFNRAFTLRRINAN PTYTNREWNWAVRQAYLQHDDGLLLAAAKRAHDMGWYDRAIYAADRTTNKHNDTYRYVTP HKTNVVSHSYNAGIDPAWAYGLMRQESRFVTSARSHVGAGGLMQIMPDTAKLIARQMGET YNPAALSEMNTNIRYGTFYLSMIQGQLSNNPVLATAGYNAGPNRARRWQPDYQPIEADQY TETIPLLETRDYVKHVMTNATHYGVILGQGAQSLIQRMKVIPTRSSP >gi|333032596|gb|GL891830.1| GENE 16 15575 - 16237 294 220 aa, chain + ## HITS:1 COG:BMEI1247 KEGG:ns NR:ns ## COG: BMEI1247 COG3719 # Protein_GI_number: 17987530 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease I # Organism: Brucella melitensis # 32 216 30 220 225 63 23.0 4e-10 MKYRDLGLQSISQLAWWIICASVGLLSSVLHAEPVNVQGYVMHVQMTPAVCALDPSKQKQ RKCLEGYSLTITGLMPETTRTDCSTQSSATLSPLQAKVVARVMPDNNARVQLWRSVGGCV PMNASQYFRTIINFAERLKIPANLTSSTNVEMQQSTLRQQFTKLNPSLPQNGIRFTCQLS RSDVVLTEVKVCYTVNGQYKQCSNHVVSNCPSEITIKGSY >gi|333032596|gb|GL891830.1| GENE 17 16449 - 17435 1311 328 aa, chain + ## HITS:1 COG:RSc1998 KEGG:ns NR:ns ## COG: RSc1998 COG0039 # Protein_GI_number: 17546717 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Ralstonia solanacearum # 2 327 3 328 329 492 76.0 1e-139 MKQPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLEVPVEKAQQALKGVMMELD DCAFPLLAGMIGTDDPKVAFKDADYALLVGSRPRGPGMERADLLKVNGEIFIGQGQALNE VASRDVKVLVVGNPANTNAYIAMKSAPDLPAKNFTAMLRLDHNRALTQVAQKAGVAVADI EKLTVWGNHSPTMYADYRFATANGESLKDKINDPAWNKDVFLPTVGKRGAAIIEARGLSS AASAANAAIDHMRDWALGTNGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGEYKIVQGLE IDEFSRERINFTLNELEEERAAIADMVK >gi|333032596|gb|GL891830.1| GENE 18 17598 - 17843 323 81 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000493 NR:ns ## KEGG: ABBFA_000493 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 81 1 81 81 126 100.0 4e-28 MFEQQPTLQLLFEQLGLDSDDASIENFIRTHQLPAEQKLHEASFWSQGQSDFLKSHWEKD DEWIVVIDELNEQLHEDSVKK >gi|333032596|gb|GL891830.1| GENE 19 17892 - 18419 424 175 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000494 NR:ns ## KEGG: ABBFA_000494 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 175 1 175 175 296 100.0 2e-79 MSIETKAIVSRIGETDQLYLTENTPELALERAELRMQLVTLSRVRQEQIHFLQEAIVLLE QARMEYEEMPMSLYLNLSLHLAKAYMLYFELNKEKRFALIAQQILKPLAHHQHGDIYFFL AYASAAQQESALTRHWLTKYLSTAQCDLELLHEHPIFNPVRHEPWYKNLIKLRTH >gi|333032596|gb|GL891830.1| GENE 20 18487 - 19092 457 201 aa, chain - ## HITS:1 COG:VCA0949 KEGG:ns NR:ns ## COG: VCA0949 COG3751 # Protein_GI_number: 15601702 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted proline hydroxylase # Organism: Vibrio cholerae # 61 199 56 201 205 92 38.0 5e-19 MHSQPLPDCWNLDQILDDLNAHGFAIVNQAYSAEYHTQVAKECSHHFDEFREAGIQNGVV STIRSDHILWINESLPVAEQHVETLSSFCQHLNQAFFLGIKEVEAHFACYNPGEFYALHR DNPQQKNDRIMSTVYYLHPEWQDDWGGQLRLQDKNNIWHIITPEPNRLVIFQSNLLHEVL VSKQQRLSITAWLRSGNSIWV >gi|333032596|gb|GL891830.1| GENE 21 19210 - 20067 879 285 aa, chain + ## HITS:1 COG:ECs4371 KEGG:ns NR:ns ## COG: ECs4371 COG2961 # Protein_GI_number: 15833625 # Func_class: R General function prediction only # Function: Protein involved in catabolism of external DNA # Organism: Escherichia coli O157:H7 # 1 285 2 280 280 212 39.0 8e-55 MNYRHHFHAGNFADVMKHVLLLQLLNRLNAKDKPYRYIDTHGGAGKYDLSQAPAQKSGEF LTGIHRLVQLSDMEKRQAPEAIQQYLKLVEELRAQEGKGSYPGSPWFALQGMREIDKATI FEMQRDVFQQLRHNIHDKRAGLHERDAYEGLLAVIPPKEKRGLVMIDPPYELERKDFPQL VELLQSAYKKWPTGVFAVWYPIKDRAMIERFEKKMFKTGIRRQLICEICVWPDDTPVGLN GCGLLVINPPWQFSEQADQALQWLFPHLRMQETGGHAAVRWLVGE >gi|333032596|gb|GL891830.1| GENE 22 20109 - 20942 888 277 aa, chain + ## HITS:1 COG:PA4693 KEGG:ns NR:ns ## COG: PA4693 COG1183 # Protein_GI_number: 15599887 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine synthase # Organism: Pseudomonas aeruginosa # 24 267 22 262 271 227 53.0 2e-59 MTNAPKPEQDLTHNEHSFDGITFEVVEEEDNPEGQKVKRRGIYLWPNLITTAALLSGFYS IIASMNGEFAQAIYAIFLAALFDGLDGRVARAIGAQSAFGEQYDSLSDLLAFGVAPAMLM YSWSLHDLGRIGLACCFVYTACAAFRLARFNVQIGVVDKRYFIGIASPLAAIIIISLVWV ARDYPFIFDLRDIAIQTINAVIMVVVGLLMISNIKYYSFKQMDRKRVPFVVMLPVVLIFA AITYNIPMGILIVSIIYALSGFVTTLLAKKNNETIKT >gi|333032596|gb|GL891830.1| GENE 23 20961 - 22028 641 355 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03216 NR:ns ## KEGG: ACICU_03216 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 355 1 355 370 739 99.0 0 MPKLISEKNQLQQLSLNSNGGVVYQPARGFFKVVYQGLILPNLPAPLRYFNYISLIGQPR IPLCYNANGIVTSAVDTATVLVSNSLHSVGHLKTYSIRRQCQLNPSRYQFDKTDLIEWQI PRVQLRRIDSEMSCDLIVQTPSDISNSSALQWGISDYWSILCHCEGEILYKGQKYEVNGL GRFKHARALHLPFLSLCFYTCQIINLNETTQVTLSQIRNQWNIILFSRLDIQELGKQPVT FTEDVNFHIHRVYPKVETPHGREMYLPREFSWQCKKNGKVIFELYGESRGDYKFGLAAGY IGSFRYQLSWNNQCLQGEGGYCEYIDCRPLRWQEKNQNEKMLDKLLLLQPCLYKK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:31:02 2011 Seq name: gi|333032595|gb|GL891831.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld26, whole genome shotgun sequence Length of sequence - 8222 bp Number of predicted genes - 9, with homology - 8 Number of transcription units - 7, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 165 133 ## COG1396 Predicted transcriptional regulators 2 2 Op 1 . - CDS 180 - 812 519 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 833 - 892 5.5 3 2 Op 2 . - CDS 895 - 1470 462 ## COG3230 Heme oxygenase - Prom 1525 - 1584 2.5 + Prom 1189 - 1248 3.1 4 3 Tu 1 . + CDS 1487 - 1603 81 ## 5 4 Tu 1 . - CDS 1586 - 4072 1085 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 4202 - 4261 8.3 - Term 4081 - 4148 4.3 6 5 Tu 1 . - CDS 4294 - 4671 198 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 4827 - 4886 5.3 + Prom 5097 - 5156 4.1 7 6 Tu 1 . + CDS 5186 - 6523 240 ## KPN_pKPN3p05906 Sea24 + Term 6529 - 6564 -0.9 8 7 Op 1 . - CDS 6578 - 6751 195 ## p2ABAYE0010 hypothetical protein 9 7 Op 2 . - CDS 6751 - 7122 434 ## p2ABAYE0011 hypothetical protein Predicted protein(s) >gi|333032595|gb|GL891831.1| GENE 1 1 - 165 133 54 aa, chain + ## HITS:1 COG:YPPCP1.08c KEGG:ns NR:ns ## COG: YPPCP1.08c COG1396 # Protein_GI_number: 16082687 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Yersinia pestis # 11 54 56 99 99 67 61.0 9e-12 KTSCFFSTHHSLSAIENRGNDLKISTMKKYVEAMGGKLRIDVELPTGKHIGFTV >gi|333032595|gb|GL891831.1| GENE 2 180 - 812 519 210 aa, chain - ## HITS:1 COG:AGl1981 KEGG:ns NR:ns ## COG: AGl1981 COG1961 # Protein_GI_number: 15891106 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 204 41 243 250 195 51.0 6e-50 MFIRAYLRASTKEQDANRAKDELIAFAREHGHKIAAFYTENESGATLERPQLMQLIDDAS EGDVILVEQIDRLARLNQTDWDTLKRKLSAKRLSVVSKELPTSYMALQQGNGSEFMDSVL RAINDMLLDMLAAIARKDYEDRRNRQMQGIARAKAQGKYKGRGKDMEKRKIIASLLKSGH SYSDIQQTVKCSRQLIAEVSKASKPISSSI >gi|333032595|gb|GL891831.1| GENE 3 895 - 1470 462 191 aa, chain - ## HITS:1 COG:NMA1927 KEGG:ns NR:ns ## COG: NMA1927 COG3230 # Protein_GI_number: 15794810 # Func_class: P Inorganic ion transport and metabolism # Function: Heme oxygenase # Organism: Neisseria meningitidis Z2491 # 3 184 30 211 230 177 48.0 2e-44 MNLPLSEALKKYSRQTHDSVDALVLSMHPFASVENYSKFLQAQDIFQKTLKPIYDDLDWN YKIEGLSQLSRLKQISKDMQDLNVNPVSMVEEQPNPSGFEAIGWLYCSEGSNLGAAILCK EAQKLNLSDSYGARHLAAHEEGRMRHWRKFKEQLDGLELTSEQRQQALQGAEDAFAFFKR VIRQVNPRGTK >gi|333032595|gb|GL891831.1| GENE 4 1487 - 1603 81 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWLLDMMSVVVFYDAMFKFPPELDNALLILADSLKLVS >gi|333032595|gb|GL891831.1| GENE 5 1586 - 4072 1085 828 aa, chain - ## HITS:1 COG:NMB1668 KEGG:ns NR:ns ## COG: NMB1668 COG1629 # Protein_GI_number: 15677517 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 24 828 9 791 791 335 30.0 3e-91 MLKGSAYRKSIHIPILEIRSKTLLSILVGTLMYQSALADIQQKEEDLPTLYMDKITVYAK KNPPINVGDDIKTAKTISDNLIDSNKDLVRYNPDISVSDAGRYGSNGYAIRGVDGNRVAL NLDGVSLPDKQVNEIFSAYGYMFEGRLSPDVEILSEVAFEVGSDSFNSGSGAMGGAVSFK TKDPEDLIKPNRQLGGYAKTGYSSSNEEISESFGLAGRNDKLEAIINYVHRRGHETKNHR MIGFDKEKLNPAYDFINDPDYAYPRTGYRSNTAAILPDPLTYETEAALAKLYVHLNEESR LGFHATKQKTDTLSNNFSRKTFSPRIGKDNVELDSYGISHRYIPSDSELIDQIDTNLNYQ KAKAAANTETYSQDWGTDNYRLDGLKHRPQIDKTLQLSIAASSFPVQTEKLGEHIFSVNT KYAKKDHKLILEESFIPASGTAESWYDFLGPSVKQDVFNIAVQDKINLTDKLDTVLGIRY DHYNYKPYMDEINKKGIEKSSKYYPVRIAYENGEFDHNKTMSNIGGMFSVNYELTPDLQA QYQISTGFMAPATSQMYSAFEMMGNSLTPNFHLKPEKSLNHEISLRGEYKDFSFKATGFY TKYSDFISLLHYQEEQERCYEDYSSGKPVCSPHTVNMIGAKNIGNAKTYGIRLGGMWDIA QLVDTEGDIKVFANLNYAKDESDKGTNLLATQPLNAMLGIGYQSSKKDWQLSGNLRYLGR KHPNDAKVVNLESNGFNSPYQEYIAPYKHIDRSKSAYVYDVYGSKKIGSQLKLSAGIFNL FNTNYVPWDSLRSLAELNVNSMVDDKGVGIERFTAPGRNYKVGLTYEF >gi|333032595|gb|GL891831.1| GENE 6 4294 - 4671 198 125 aa, chain - ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 7 125 2 119 119 108 48.0 2e-24 MHHNRFVRLIFMILGAVFFILGLIGIVLPVLPTTPFILLTATCWAKGSIKFNNWLLNHKI FGKMVIDWQQHRAIPRKAKYLAWSMMALSCGMLFYRFSDNWQWLAWATCVICITVAIWMS RLPDA >gi|333032595|gb|GL891831.1| GENE 7 5186 - 6523 240 445 aa, chain + ## HITS:1 COG:no KEGG:KPN_pKPN3p05906 NR:ns ## KEGG: KPN_pKPN3p05906 # Name: not_defined # Def: Sea24 # Organism: K.pneumoniae # Pathway: not_defined # 1 439 1 440 452 516 58.0 1e-144 MLVSMSDKELKRLSVLQEICDQRITQSQAAQLLHISERQIRRLLQKYKAQGPAALAHAGR GQISNSKLPEELKLKCLNIVSDQLHGFGPTLAHEKLTTVHGFDLSVETLRSWMIAADLWM PRSKRLKRPYQPRYNRDCFGELIQIDGSHHDWFEGRAAKCCLLVFIDDATGKLQHLRFCE SESTFDYMISTRLYVEQHGKPLAFYSDKHSVFRVNQSSKKDTKITQFGRVLSTLNIDIIF ANSPQAKGRVERANRTLQDRLIKEMRLKGICSIEQANVWLPCFIEQFNQKFAKMAFNPKN LHRPITETAEELDDIFTWREPRRVTNSLTITYDKCVYLLENTEENQRLIGKYLEFLEYPD GTVAIMHNSRKINYSLFDKLSQLNQREIVENKRLGAVLNHIQQQHEELEQQNKRNRSQKM PSRRAQKTAIQERNLNPVLDLEMSI >gi|333032595|gb|GL891831.1| GENE 8 6578 - 6751 195 57 aa, chain - ## HITS:1 COG:no KEGG:p2ABAYE0010 NR:ns ## KEGG: p2ABAYE0010 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 57 1 57 57 93 96.0 2e-18 MSDNIIQLSKPCTLCENRQNVKLFAGLMLCGSCQENIRLTNPSMFSANDEIEQKAQD >gi|333032595|gb|GL891831.1| GENE 9 6751 - 7122 434 123 aa, chain - ## HITS:1 COG:no KEGG:p2ABAYE0011 NR:ns ## KEGG: p2ABAYE0011 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 123 1 123 123 209 97.0 3e-53 MGEKVKTYAVRLDPQVAEFYDQLANSEGIRTSKLFSKILTNDFQSIAVKQQADRIEDLVN RLEKRIDDFEEDNNFSEKYYEDFSGLYFMMLWTLMKNGASKEEVRMMQAKGYSYADDNYK RVK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:32:27 2011 Seq name: gi|333032594|gb|GL891832.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld27, whole genome shotgun sequence Length of sequence - 237284 bp Number of predicted genes - 220, with homology - 217 Number of transcription units - 131, operones - 51 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 287 103 ## ABBFA_003244 hypothetical protein - Prom 401 - 460 5.0 + Prom 230 - 289 11.3 2 2 Tu 1 . + CDS 411 - 1283 853 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 1339 - 1377 -0.6 3 3 Tu 1 . - CDS 1267 - 1476 176 ## gi|332873035|ref|ZP_08440992.1| hypothetical protein HMPREF0022_00592 - Prom 1699 - 1758 2.2 + Prom 1305 - 1364 5.2 4 4 Tu 1 . + CDS 1388 - 2812 1655 ## COG2056 Predicted permease + Term 2835 - 2888 11.2 + Prom 3045 - 3104 14.3 5 5 Tu 1 . + CDS 3139 - 3720 744 ## COG3047 Outer membrane protein W + Term 3769 - 3804 4.4 + Prom 3779 - 3838 8.8 6 6 Op 1 . + CDS 3905 - 4258 360 ## COG4461 Uncharacterized protein conserved in bacteria, putative lipoprotein 7 6 Op 2 . + CDS 4361 - 6280 2405 ## COG0326 Molecular chaperone, HSP90 family + Term 6297 - 6328 2.5 - Term 6093 - 6132 1.2 8 7 Tu 1 . - CDS 6364 - 7266 490 ## ACICU_00313 hypothetical protein - Prom 7295 - 7354 7.3 9 8 Tu 1 . - CDS 7388 - 8527 1034 ## ABBFA_003237 hypothetical protein - Prom 8639 - 8698 7.7 - Term 8834 - 8878 0.3 10 9 Tu 1 . - CDS 8886 - 9590 938 ## COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis - Prom 9612 - 9671 4.9 + Prom 9512 - 9571 3.4 11 10 Tu 1 . + CDS 9768 - 10526 841 ## ABAYE3475 hypothetical protein 12 11 Tu 1 . - CDS 10547 - 10954 389 ## COG0789 Predicted transcriptional regulators + Prom 10902 - 10961 7.2 13 12 Tu 1 . + CDS 11072 - 11629 421 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold + Term 11630 - 11673 7.6 - Term 11615 - 11663 11.1 14 13 Tu 1 . - CDS 11698 - 12381 383 ## ACICU_00319 hypothetical protein - Prom 12444 - 12503 5.6 + Prom 12475 - 12534 6.9 15 14 Tu 1 . + CDS 12690 - 13181 578 ## ACICU_00320 hypothetical protein + Term 13187 - 13219 3.0 - Term 13163 - 13215 16.7 16 15 Op 1 20/0.000 - CDS 13226 - 14398 1523 ## COG0183 Acetyl-CoA acetyltransferase 17 15 Op 2 . - CDS 14411 - 16564 2733 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Prom 16810 - 16869 15.5 18 16 Tu 1 . + CDS 17136 - 18050 740 ## COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases + Term 18052 - 18087 4.2 - Term 18045 - 18070 -0.5 19 17 Tu 1 . - CDS 18127 - 18216 82 ## - Prom 18270 - 18329 4.2 20 18 Tu 1 . - CDS 18398 - 18769 421 ## ACICU_00324 hypothetical protein - Prom 18794 - 18853 3.0 + Prom 18777 - 18836 4.9 21 19 Tu 1 . + CDS 18910 - 19440 557 ## ACICU_00325 hypothetical protein + Prom 19469 - 19528 2.2 22 20 Tu 1 . + CDS 19565 - 21373 2003 ## COG0322 Nuclease subunit of the excinuclease complex + Prom 21397 - 21456 3.9 23 21 Tu 1 . + CDS 21494 - 22288 577 ## COG1946 Acyl-CoA thioesterase + Term 22341 - 22375 -0.5 + Prom 22326 - 22385 3.0 24 22 Tu 1 . + CDS 22407 - 22994 276 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase + Term 23015 - 23045 1.2 + Prom 22997 - 23056 2.4 25 23 Op 1 4/0.098 + CDS 23117 - 23971 916 ## COG0350 Methylated DNA-protein cysteine methyltransferase 26 23 Op 2 . + CDS 23968 - 24579 451 ## COG3145 Alkylated DNA repair protein + Term 24626 - 24664 1.2 - Term 24560 - 24616 3.5 27 24 Tu 1 . - CDS 24774 - 25547 670 ## COG1414 Transcriptional regulator - Prom 25728 - 25787 4.8 - Term 25710 - 25764 -0.1 28 25 Tu 1 . - CDS 25873 - 26013 57 ## gi|332873059|ref|ZP_08441016.1| hypothetical protein HMPREF0022_00616 - Prom 26140 - 26199 3.2 + Prom 25958 - 26017 2.0 29 26 Op 1 . + CDS 26043 - 28142 1958 ## COG1289 Predicted membrane protein 30 26 Op 2 . + CDS 28135 - 28341 76 ## ABAYE3457 hypothetical protein 31 26 Op 3 . + CDS 28381 - 29382 1336 ## COG1566 Multidrug resistance efflux pump + Term 29571 - 29606 -0.1 32 27 Op 1 8/0.049 - CDS 29439 - 29879 414 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 33 27 Op 2 . - CDS 29879 - 30433 724 ## COG1678 Putative transcriptional regulator - Prom 30474 - 30533 5.7 34 28 Tu 1 . - CDS 30560 - 32227 1864 ## COG0497 ATPase involved in DNA repair - Prom 32303 - 32362 7.3 + Prom 32100 - 32159 4.6 35 29 Op 1 . + CDS 32342 - 33652 879 ## ACICU_00338 hypothetical protein 36 29 Op 2 . + CDS 33729 - 34055 364 ## COG3123 Uncharacterized protein conserved in bacteria + Term 34092 - 34135 8.7 + Prom 34077 - 34136 4.9 37 30 Op 1 . + CDS 34157 - 34906 307 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 38 30 Op 2 . + CDS 34942 - 35856 921 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 36066 - 36104 0.1 39 31 Op 1 7/0.049 - CDS 35853 - 36449 777 ## COG0237 Dephospho-CoA kinase 40 31 Op 2 7/0.049 - CDS 36451 - 37311 635 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 41 31 Op 3 24/0.000 - CDS 37311 - 38537 1480 ## COG1459 Type II secretory pathway, component PulF 42 31 Op 4 . - CDS 38567 - 40279 1741 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 40315 - 40374 6.7 + Prom 40277 - 40336 8.9 43 32 Op 1 9/0.000 + CDS 40571 - 41365 981 ## COG0149 Triosephosphate isomerase 44 32 Op 2 2/0.098 + CDS 41378 - 41707 414 ## COG1314 Preprotein translocase subunit SecG + Term 41913 - 41979 30.0 + TRNA 41764 - 41848 59.4 # Leu GAG 0 0 + TRNA 41891 - 41967 82.1 # Met CAT 0 0 + TRNA 42057 - 42133 82.1 # Met CAT 0 0 + Prom 42066 - 42125 71.5 45 33 Op 1 32/0.000 + CDS 42349 - 42873 663 ## COG0779 Uncharacterized protein conserved in bacteria 46 33 Op 2 20/0.000 + CDS 42911 - 44395 869 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 47 33 Op 3 32/0.000 + CDS 44406 - 47105 3473 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 48 33 Op 4 . + CDS 47105 - 47506 511 ## COG0858 Ribosome-binding factor A + Term 47520 - 47563 10.3 - Term 47507 - 47549 10.1 49 34 Op 1 . - CDS 47563 - 47967 445 ## COG1320 Multisubunit Na+/H+ antiporter, MnhG subunit 50 34 Op 2 . - CDS 47980 - 48255 382 ## ACICU_00353 multicomponent K+:H+ antiporter subunit F 51 34 Op 3 12/0.000 - CDS 48252 - 48779 423 ## COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit 52 34 Op 4 21/0.000 - CDS 48782 - 50593 1667 ## COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 53 34 Op 5 6/0.073 - CDS 50593 - 50961 448 ## COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit 54 34 Op 6 . - CDS 50958 - 53807 2535 ## COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit - Prom 54056 - 54115 5.3 - Term 53990 - 54030 5.2 55 35 Op 1 . - CDS 54122 - 55504 1160 ## COG3950 Predicted ATP-binding protein involved in virulence 56 35 Op 2 . - CDS 55528 - 57030 1262 ## COG0210 Superfamily I DNA and RNA helicases 57 35 Op 3 . - CDS 57040 - 57813 1035 ## COG0139 Phosphoribosyl-AMP cyclohydrolase - Prom 57858 - 57917 5.1 58 36 Tu 1 . - CDS 57967 - 59280 1012 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - Prom 59344 - 59403 6.4 - Term 59348 - 59392 4.4 59 37 Op 1 . - CDS 59405 - 61024 1791 ## COG0661 Predicted unusual protein kinase 60 37 Op 2 . - CDS 61037 - 61705 766 ## ACICU_00363 hypothetical protein 61 37 Op 3 . - CDS 61717 - 62664 340 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 - Prom 62715 - 62774 5.6 - Term 62749 - 62797 3.0 62 38 Tu 1 . - CDS 62813 - 63520 729 ## ABBFA_003183 hypothetical protein - Prom 63558 - 63617 9.1 + Prom 63640 - 63699 7.5 63 39 Tu 1 . + CDS 63728 - 65146 1330 ## COG2326 Uncharacterized conserved protein + Term 65195 - 65229 -0.6 - Term 65117 - 65157 5.6 64 40 Tu 1 . - CDS 65169 - 65675 457 ## ACICU_00367 hypothetical protein - Prom 65815 - 65874 4.3 + Prom 65626 - 65685 5.6 65 41 Op 1 8/0.049 + CDS 65847 - 69482 3057 ## COG1330 Exonuclease V gamma subunit 66 41 Op 2 13/0.000 + CDS 69486 - 73184 2781 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 67 41 Op 3 . + CDS 73293 - 75044 1539 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Term 75257 - 75298 7.2 - Term 75699 - 75730 3.4 68 42 Tu 1 . - CDS 75761 - 77059 936 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Prom 77233 - 77292 5.7 + Prom 77189 - 77248 6.2 69 43 Op 1 26/0.000 + CDS 77272 - 77541 456 ## PROTEIN SUPPORTED gi|126640438|ref|YP_001083422.1| 30S ribosomal protein S15 + Term 77606 - 77638 0.9 + Prom 77629 - 77688 3.7 70 43 Op 2 . + CDS 77793 - 79886 2003 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 79907 - 79935 -0.3 + Prom 79888 - 79947 5.9 71 43 Op 3 . + CDS 79971 - 81182 884 ## COG0598 Mg2+ and Co2+ transporters + Term 81370 - 81402 0.8 - Term 81227 - 81287 3.1 72 44 Op 1 . - CDS 81429 - 81758 380 ## ABBFA_003173 hypothetical protein 73 44 Op 2 . - CDS 81770 - 82726 1159 ## COG2214 DnaJ-class molecular chaperone - Prom 82751 - 82810 4.9 - Term 82828 - 82869 -0.9 74 45 Tu 1 . - CDS 82877 - 83488 773 ## COG1280 Putative threonine efflux protein - Prom 83537 - 83596 10.5 - Term 83575 - 83614 8.1 75 46 Op 1 . - CDS 83627 - 84502 1104 ## COG1281 Disulfide bond chaperones of the HSP33 family - Prom 84523 - 84582 2.8 76 46 Op 2 . - CDS 84668 - 86509 942 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 77 46 Op 3 . - CDS 86586 - 88814 1749 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 88865 - 88924 4.6 + Prom 88683 - 88742 3.7 78 47 Op 1 10/0.000 + CDS 88963 - 90168 1176 ## COG1459 Type II secretory pathway, component PulF 79 47 Op 2 . + CDS 90192 - 90773 794 ## COG2165 Type II secretory pathway, pseudopilin PulG + Prom 90948 - 91007 10.6 80 48 Op 1 . + CDS 91040 - 91384 313 ## AOLE_17575 hypothetical protein + Prom 91391 - 91450 5.9 81 48 Op 2 . + CDS 91529 - 91867 407 ## COG0073 EMAP domain + Term 91874 - 91908 -0.9 82 49 Op 1 9/0.000 - CDS 91869 - 93428 1535 ## COG0815 Apolipoprotein N-acyltransferase 83 49 Op 2 . - CDS 93425 - 94264 894 ## COG4535 Putative Mg2+ and Co2+ transporter CorC - Prom 94298 - 94357 6.6 + Prom 94368 - 94427 4.4 84 50 Tu 1 . + CDS 94449 - 94706 282 ## COG0425 Predicted redox protein, regulator of disulfide bond formation + Term 94725 - 94775 12.8 - Term 94722 - 94752 3.0 85 51 Tu 1 . - CDS 94802 - 96514 2005 ## COG0644 Dehydrogenases (flavoproteins) - Prom 96623 - 96682 3.4 + Prom 96648 - 96707 4.4 86 52 Op 1 . + CDS 96731 - 97312 469 ## COG3816 Uncharacterized protein conserved in bacteria 87 52 Op 2 . + CDS 97361 - 98227 843 ## COG0796 Glutamate racemase + Prom 98245 - 98304 8.1 88 53 Op 1 . + CDS 98348 - 99352 719 ## ABBFA_003156 hypothetical protein 89 53 Op 2 . + CDS 99426 - 100442 1115 ## COG0276 Protoheme ferro-lyase (ferrochelatase) 90 53 Op 3 . + CDS 100466 - 101110 766 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 101337 - 101381 -0.3 91 54 Tu 1 . - CDS 101107 - 101301 181 ## ABBFA_003153 UPF0243 zinc-binding protein YacG - Prom 101324 - 101383 6.6 + Prom 101311 - 101370 4.7 92 55 Op 1 . + CDS 101395 - 102027 709 ## ACICU_00395 putative methyltransferase 93 55 Op 2 . + CDS 102017 - 103222 1161 ## COG2081 Predicted flavoproteins 94 55 Op 3 . + CDS 103300 - 103710 467 ## COG3791 Uncharacterized conserved protein + Term 103811 - 103863 0.2 + Prom 103863 - 103922 2.2 95 56 Tu 1 . + CDS 103946 - 104326 449 ## COG0239 Integral membrane protein possibly involved in chromosome condensation - Term 104647 - 104694 1.1 96 57 Tu 1 . - CDS 104755 - 105087 541 ## A1S_0390 putative type III effector - Prom 105111 - 105170 7.1 - Term 105256 - 105301 0.5 97 58 Tu 1 . - CDS 105340 - 105594 439 ## PROTEIN SUPPORTED gi|126640468|ref|YP_001083452.1| 50S ribosomal protein L31 type B - Prom 105622 - 105681 5.8 - Term 105642 - 105681 6.1 98 59 Tu 1 . - CDS 105695 - 106993 1200 ## COG0661 Predicted unusual protein kinase - Prom 107116 - 107175 10.7 + Prom 107127 - 107186 5.6 99 60 Op 1 12/0.000 + CDS 107251 - 108498 1400 ## COG1960 Acyl-CoA dehydrogenases 100 60 Op 2 . + CDS 108532 - 109782 1319 ## COG1960 Acyl-CoA dehydrogenases + Term 109785 - 109833 5.9 - Term 109772 - 109816 7.2 101 61 Op 1 . - CDS 109817 - 111112 1375 ## COG0534 Na+-driven multidrug efflux pump - Prom 111132 - 111191 1.7 102 61 Op 2 . - CDS 111197 - 111658 421 ## COG3238 Uncharacterized protein conserved in bacteria - Prom 111682 - 111741 5.4 + Prom 111693 - 111752 6.3 103 62 Tu 1 . + CDS 111824 - 112930 1211 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases + Term 113073 - 113119 1.0 - Term 112939 - 112970 -0.8 104 63 Tu 1 . - CDS 112981 - 113736 900 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 113768 - 113827 5.8 + Prom 113758 - 113817 4.3 105 64 Tu 1 . + CDS 113849 - 114745 640 ## COG0583 Transcriptional regulator + Term 114771 - 114816 5.1 - TRNA 114809 - 114884 92.4 # Lys TTT 0 0 - TRNA 114907 - 114982 92.4 # Lys TTT 0 0 - Term 114941 - 114978 -0.9 106 65 Tu 1 . - CDS 115215 - 117056 1706 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 117171 - 117230 4.8 - Term 117173 - 117224 5.4 107 66 Tu 1 . - CDS 117249 - 120581 4144 ## COG1530 Ribonucleases G and E - Prom 120643 - 120702 2.0 108 67 Op 1 3/0.098 + CDS 121304 - 122236 195 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 109 67 Op 2 . + CDS 122233 - 122907 851 ## COG0546 Predicted phosphatases + Term 122923 - 122959 3.1 110 68 Op 1 . + CDS 122981 - 123676 614 ## COG2378 Predicted transcriptional regulator 111 68 Op 2 . + CDS 123726 - 124331 738 ## COG0625 Glutathione S-transferase + Term 124363 - 124401 -0.3 112 69 Op 1 . - CDS 124390 - 125067 548 ## COG4291 Predicted membrane protein - Prom 125180 - 125239 10.7 113 69 Op 2 . - CDS 125331 - 126230 233 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 - Prom 126335 - 126394 13.3 + Prom 126816 - 126875 6.4 114 70 Tu 1 . + CDS 126965 - 128017 916 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold + Term 128036 - 128081 10.1 - Term 128031 - 128062 3.4 115 71 Tu 1 . - CDS 128084 - 130240 2489 ## COG0376 Catalase (peroxidase I) - Prom 130269 - 130328 4.2 - Term 130704 - 130749 6.6 116 72 Op 1 7/0.049 - CDS 130754 - 133048 2394 ## COG3605 Signal transduction protein containing GAF and PtsI domains - Prom 133068 - 133127 4.7 117 72 Op 2 . - CDS 133134 - 133619 388 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 133717 - 133776 5.4 + Prom 133656 - 133715 6.1 118 73 Tu 1 . + CDS 133802 - 134452 763 ## COG0560 Phosphoserine phosphatase - Term 134449 - 134499 6.1 119 74 Tu 1 . - CDS 134507 - 135103 384 ## ACICU_00422 transmembrane protein - Prom 135133 - 135192 8.8 + Prom 135117 - 135176 5.2 120 75 Tu 1 . + CDS 135199 - 135435 241 ## AOLE_17365 hypothetical protein + Term 135546 - 135583 1.0 121 76 Op 1 . - CDS 135441 - 136301 802 ## COG0583 Transcriptional regulator - Prom 136356 - 136415 2.6 122 76 Op 2 . - CDS 136419 - 136667 351 ## ACICU_00424 hypothetical protein - Prom 136726 - 136785 9.6 + Prom 136815 - 136874 7.1 123 77 Op 1 30/0.000 + CDS 136911 - 138329 1911 ## COG0065 3-isopropylmalate dehydratase large subunit 124 77 Op 2 . + CDS 138348 - 138995 773 ## COG0066 3-isopropylmalate dehydratase small subunit + Prom 139025 - 139084 4.5 125 78 Op 1 . + CDS 139108 - 139698 372 ## ABBFA_003117 hypothetical protein 126 78 Op 2 . + CDS 139730 - 140809 1435 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Term 140829 - 140857 2.3 - Term 140817 - 140845 2.3 127 79 Tu 1 . - CDS 140863 - 141270 201 ## ACICU_00429 hypothetical protein - Prom 141399 - 141458 6.7 + Prom 141248 - 141307 8.1 128 80 Tu 1 . + CDS 141439 - 141807 227 ## COG3755 Uncharacterized protein conserved in bacteria - Term 141797 - 141853 3.2 129 81 Tu 1 . - CDS 141859 - 142080 253 ## PROTEIN SUPPORTED gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 - Prom 142107 - 142166 7.5 + Prom 142152 - 142211 5.8 130 82 Tu 1 . + CDS 142330 - 143355 1196 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 143470 - 143510 3.9 - Term 143205 - 143248 1.0 131 83 Op 1 . - CDS 143375 - 144172 798 ## COG0101 Pseudouridylate synthase 132 83 Op 2 . - CDS 144187 - 145134 976 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Term 145167 - 145196 1.4 133 84 Op 1 . - CDS 145217 - 146479 1251 ## ACICU_00435 hypothetical protein 134 84 Op 2 . - CDS 146539 - 147903 1043 ## ACICU_00436 hypothetical protein - Prom 147970 - 148029 7.6 135 85 Tu 1 . + CDS 147863 - 147967 62 ## + Term 147995 - 148039 7.5 - Term 147989 - 148020 3.4 136 86 Tu 1 . - CDS 148052 - 149170 1475 ## COG0136 Aspartate-semialdehyde dehydrogenase - Prom 149282 - 149341 9.1 + Prom 149228 - 149287 4.8 137 87 Tu 1 . + CDS 149360 - 150481 939 ## COG3021 Uncharacterized protein conserved in bacteria + Term 150694 - 150741 9.1 + Prom 151076 - 151135 1.8 138 88 Tu 1 . + CDS 151171 - 152457 1276 ## COG1301 Na+/H+-dicarboxylate symporters + Term 152469 - 152527 10.2 - Term 152472 - 152500 3.0 139 89 Tu 1 4/0.098 - CDS 152514 - 153614 1054 ## COG0438 Glycosyltransferase - Prom 153819 - 153878 2.7 140 90 Tu 1 . - CDS 153880 - 154815 1029 ## COG1560 Lauroyl/myristoyl acyltransferase - Prom 154862 - 154921 2.9 - Term 154842 - 154888 5.2 141 91 Tu 1 . - CDS 154935 - 155567 802 ## COG1280 Putative threonine efflux protein - Prom 155609 - 155668 9.4 - Term 155630 - 155695 12.1 142 92 Tu 1 . - CDS 155713 - 157623 2386 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 157788 - 157847 4.9 + Prom 157574 - 157633 4.0 143 93 Tu 1 . + CDS 157656 - 157901 225 ## ABBFA_003100 SlyX family protein + Term 157908 - 157942 6.0 - Term 157890 - 157932 9.5 144 94 Tu 1 . - CDS 157949 - 158959 1275 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases - Prom 158981 - 159040 3.2 + Prom 158957 - 159016 3.7 145 95 Tu 1 . + CDS 159059 - 159436 236 ## COG1733 Predicted transcriptional regulators + Prom 159470 - 159529 4.1 146 96 Op 1 . + CDS 159584 - 160033 400 ## ABBFA_003097 hypothetical protein 147 96 Op 2 . + CDS 160069 - 162705 2563 ## COG0550 Topoisomerase IA 148 96 Op 3 . + CDS 162722 - 162826 57 ## 149 96 Op 4 . + CDS 162793 - 163551 758 ## ACICU_00449 hypothetical protein + Term 163554 - 163595 -0.6 + Prom 163606 - 163665 5.4 150 97 Tu 1 . + CDS 163689 - 164261 636 ## COG3247 Uncharacterized conserved protein + Term 164271 - 164315 3.1 + Prom 164297 - 164356 4.0 151 98 Op 1 . + CDS 164378 - 166357 2034 ## COG0210 Superfamily I DNA and RNA helicases 152 98 Op 2 . + CDS 166410 - 166670 411 ## COG0724 RNA-binding proteins (RRM domain) 153 98 Op 3 . + CDS 166678 - 166845 154 ## ACICU_00453 hypothetical protein 154 98 Op 4 . + CDS 166932 - 167465 701 ## ABBFA_003090 hypothetical protein 155 98 Op 5 . + CDS 167527 - 167856 332 ## ABBFA_003089 hypothetical protein + Term 167862 - 167891 1.4 - Term 167850 - 167879 1.4 156 99 Tu 1 . - CDS 167894 - 169603 471 ## PROTEIN SUPPORTED gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 - Prom 169665 - 169724 12.6 - Term 169691 - 169741 10.1 157 100 Op 1 16/0.000 - CDS 169751 - 169906 262 ## PROTEIN SUPPORTED gi|50083740|ref|YP_045250.1| 50S ribosomal protein L33 158 100 Op 2 . - CDS 169919 - 170155 407 ## PROTEIN SUPPORTED gi|50083741|ref|YP_045251.1| 50S ribosomal protein L28 - Prom 170232 - 170291 4.0 - Term 170274 - 170314 6.2 159 101 Tu 1 . - CDS 170323 - 171771 1437 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 171913 - 171972 5.9 + Prom 171739 - 171798 8.1 160 102 Op 1 . + CDS 171884 - 172576 476 ## COG1309 Transcriptional regulator 161 102 Op 2 . + CDS 172651 - 173514 950 ## COG0788 Formyltetrahydrofolate hydrolase + Term 173527 - 173562 1.7 162 103 Op 1 . + CDS 173906 - 174661 797 ## ABBFA_003082 protein TonB 163 103 Op 2 30/0.000 + CDS 174706 - 175326 783 ## COG0811 Biopolymer transport proteins 164 103 Op 3 . + CDS 175326 - 175730 528 ## COG0848 Biopolymer transport protein + Term 175748 - 175790 9.0 - Term 175741 - 175771 1.1 165 104 Tu 1 . - CDS 175791 - 176312 692 ## COG0225 Peptide methionine sulfoxide reductase - Prom 176352 - 176411 6.5 166 105 Op 1 . - CDS 176413 - 177468 1011 ## ACICU_00466 hypothetical protein 167 105 Op 2 16/0.000 - CDS 177483 - 177992 504 ## COG0262 Dihydrofolate reductase 168 105 Op 3 . - CDS 178037 - 178879 856 ## COG0207 Thymidylate synthase - Prom 178902 - 178961 4.8 169 106 Op 1 . - CDS 179001 - 179363 206 ## ACICU_00469 hypothetical protein 170 106 Op 2 . - CDS 179374 - 179733 259 ## ABBFA_003074 hypothetical protein - Term 179766 - 179795 0.5 171 106 Op 3 . - CDS 179807 - 180625 979 ## COG0682 Prolipoprotein diacylglyceryltransferase - Prom 180783 - 180842 5.1 + Prom 180627 - 180686 4.3 172 107 Tu 1 . + CDS 180719 - 181498 780 ## COG3332 Uncharacterized conserved protein + Term 181509 - 181540 3.4 - Term 181491 - 181534 10.3 173 108 Tu 1 . - CDS 181547 - 183880 2504 ## COG3211 Predicted phosphatase - Prom 184005 - 184064 7.4 - Term 184028 - 184073 9.4 174 109 Tu 1 . - CDS 184089 - 186269 2102 ## ACICU_00474 putative phosphatase putative alkaline phosphatase - Prom 186302 - 186361 4.3 - Term 186393 - 186426 4.0 175 110 Op 1 28/0.000 - CDS 186442 - 187212 591 ## COG0805 Sec-independent protein secretion pathway component TatC 176 110 Op 2 16/0.000 - CDS 187209 - 187646 527 ## COG1826 Sec-independent protein secretion pathway components 177 110 Op 3 . - CDS 187658 - 187876 295 ## COG1826 Sec-independent protein secretion pathway components - Prom 187896 - 187955 4.9 + Prom 187893 - 187952 6.8 178 111 Tu 1 . + CDS 188129 - 189004 739 ## ACICU_00478 putative permease + Term 189064 - 189115 1.4 179 112 Tu 1 . - CDS 189197 - 189823 472 ## PROTEIN SUPPORTED gi|90023287|ref|YP_529114.1| ribosomal protein L33 - Prom 189900 - 189959 5.1 - Term 189918 - 189970 15.3 180 113 Op 1 . - CDS 189992 - 190579 851 ## COG0790 FOG: TPR repeat, SEL1 subfamily 181 113 Op 2 8/0.049 - CDS 190576 - 191169 686 ## COG0500 SAM-dependent methyltransferases 182 113 Op 3 . - CDS 191169 - 192329 1102 ## COG2021 Homoserine acetyltransferase - Term 192355 - 192395 7.1 183 113 Op 4 . - CDS 192413 - 194110 2024 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases - Prom 194203 - 194262 5.5 184 114 Tu 1 . - CDS 194569 - 195192 487 ## COG3128 Uncharacterized iron-regulated protein - Prom 195263 - 195322 5.6 - Term 195272 - 195316 9.0 185 115 Tu 1 . - CDS 195357 - 197588 2030 ## COG4774 Outer membrane receptor for monomeric catechols + Prom 197728 - 197787 8.6 186 116 Op 1 29/0.000 + CDS 198003 - 199337 1912 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 199353 - 199393 8.1 + Prom 199387 - 199446 4.8 187 116 Op 2 24/0.000 + CDS 199530 - 200135 871 ## COG0740 Protease subunit of ATP-dependent Clp proteases 188 116 Op 3 . + CDS 200237 - 201550 1491 ## COG1219 ATP-dependent protease Clp, ATPase subunit + Term 201563 - 201614 6.7 + Prom 201579 - 201638 4.7 189 117 Tu 1 . + CDS 201698 - 202414 591 ## ACICU_00489 hypothetical protein + Term 202427 - 202469 4.1 - Term 202177 - 202212 -0.9 190 118 Tu 1 . - CDS 202439 - 202993 647 ## ABBFA_003054 hypothetical protein - Prom 203052 - 203111 8.4 - Term 203088 - 203134 9.8 191 119 Tu 1 . - CDS 203135 - 204661 2619 ## PROTEIN SUPPORTED gi|169634422|ref|YP_001708158.1| fumarate hydratase - Prom 204816 - 204875 8.5 - Term 204823 - 204859 3.4 192 120 Op 1 21/0.000 - CDS 204889 - 207033 2171 ## COG0280 Phosphotransacetylase 193 120 Op 2 . - CDS 207077 - 208279 1460 ## COG0282 Acetate kinase - Prom 208506 - 208565 9.0 + Prom 208734 - 208793 6.8 194 121 Op 1 8/0.049 + CDS 209042 - 210895 2108 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 195 121 Op 2 2/0.098 + CDS 210916 - 211536 779 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase + Term 211566 - 211606 5.1 + Prom 211579 - 211638 2.3 196 122 Op 1 4/0.098 + CDS 211732 - 213090 1298 ## COG2610 H+/gluconate symporter and related permeases 197 122 Op 2 . + CDS 213108 - 213620 528 ## COG3265 Gluconate kinase + Prom 213689 - 213748 2.9 198 123 Tu 1 . + CDS 213793 - 215421 1545 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 215443 - 215471 1.0 - Term 215465 - 215518 12.1 199 124 Tu 1 . - CDS 215528 - 216793 1487 ## COG0014 Gamma-glutamyl phosphate reductase 200 125 Tu 1 . + CDS 217093 - 218406 1202 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 218427 - 218469 6.1 201 126 Op 1 . - CDS 218461 - 219303 694 ## COG3315 O-Methyltransferase involved in polyketide biosynthesis - Prom 219327 - 219386 1.5 202 126 Op 2 . - CDS 219388 - 220407 1281 ## COG1472 Beta-glucosidase-related glycosidases - Prom 220479 - 220538 4.0 + Prom 220518 - 220577 5.5 203 127 Tu 1 . + CDS 220600 - 222783 2501 ## COG0793 Periplasmic protease + Term 222802 - 222847 5.2 + Prom 222842 - 222901 4.1 204 128 Op 1 2/0.098 + CDS 222922 - 224220 925 ## COG0438 Glycosyltransferase 205 128 Op 2 . + CDS 224245 - 224796 623 ## COG0671 Membrane-associated phospholipid phosphatase + Prom 224801 - 224860 2.0 206 128 Op 3 1/0.220 + CDS 224896 - 225096 352 ## COG2975 Uncharacterized protein conserved in bacteria + Prom 225111 - 225170 5.2 207 129 Op 1 11/0.000 + CDS 225210 - 225641 674 ## COG0105 Nucleoside diphosphate kinase + Term 225657 - 225698 8.1 + Prom 225666 - 225725 6.9 208 129 Op 2 8/0.049 + CDS 225764 - 226996 1231 ## COG0820 Predicted Fe-S-cluster redox enzyme 209 129 Op 3 . + CDS 227036 - 227812 901 ## COG3063 Tfp pilus assembly protein PilF 210 129 Op 4 . + CDS 227803 - 228594 809 ## ACICU_00510 hypothetical protein 211 129 Op 5 11/0.000 + CDS 228616 - 229731 1421 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 212 129 Op 6 12/0.000 + CDS 229728 - 231020 1444 ## COG0124 Histidyl-tRNA synthetase 213 129 Op 7 9/0.000 + CDS 231049 - 231747 883 ## COG2976 Uncharacterized protein conserved in bacteria 214 129 Op 8 7/0.049 + CDS 231747 - 232892 1335 ## COG1520 FOG: WD40-like repeat + Term 232947 - 232992 7.1 + Prom 232960 - 233019 5.7 215 130 Tu 1 . + CDS 233080 - 234489 1740 ## COG1160 Predicted GTPases + Term 234509 - 234541 2.0 + Prom 234570 - 234629 14.8 216 131 Op 1 . + CDS 234686 - 235300 544 ## ACICU_00517 hypothetical protein 217 131 Op 2 4/0.098 + CDS 235294 - 236088 706 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 218 131 Op 3 4/0.098 + CDS 236090 - 236350 334 ## COG0236 Acyl carrier protein 219 131 Op 4 3/0.098 + CDS 236362 - 236610 433 ## COG0236 Acyl carrier protein 220 131 Op 5 . + CDS 236631 - 237161 284 ## COG4648 Predicted membrane protein Predicted protein(s) >gi|333032594|gb|GL891832.1| GENE 1 2 - 287 103 95 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003244 NR:ns ## KEGG: ABBFA_003244 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 86 1 86 165 183 100.0 1e-45 MAILKKLQNIPSISKFLFNHYPPYRGAGIHIEVMNLELCHVRVKMPLTWKNQNLVGTHFG GSLYSMVDPFYMLILMHHLGSKYIVWLCTRQISQN >gi|333032594|gb|GL891832.1| GENE 2 411 - 1283 853 290 aa, chain + ## HITS:1 COG:PA3324_1 KEGG:ns NR:ns ## COG: PA3324_1 COG0596 # Protein_GI_number: 15598520 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 1 289 10 302 318 222 39.0 6e-58 MQPKIYAVTTSDQQTLCAKAWGDEKNTPLVLVHGYPDNQEVWESVIEHLINDFYIVTYDV RGAGLSSIPKRIRDYRLERLSLDLQEVVDEVIPNRQFHMAAHDWGSIQSWESATEPKFKG RLLSYTTISGPCLDHAALFLREKFKTSPAQILKILTKSWYIGAFHLPLIAPTVWSLFSPE KWGKILNDLERKDNLPLNSNISSDGKYGINLYRANFIPRLTRPRQRYAQCPVKAIILKYD TFVSPEYITEAMPKWVENFEYVELEANHWAILSQAEKVAAHIRQFINSQS >gi|333032594|gb|GL891832.1| GENE 3 1267 - 1476 176 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873035|ref|ZP_08440992.1| ## NR: gi|332873035|ref|ZP_08440992.1| hypothetical protein HMPREF0022_00592 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_00592 [Acinetobacter baumannii 6014059] # 30 69 1 40 40 67 100.0 4e-10 MAETTKVSTTETRASDNKNITAIAITTAFMNKFRAKQKAIFYQIHLYEAENIAELPVLYI KQSLISSAS >gi|333032594|gb|GL891832.1| GENE 4 1388 - 2812 1655 474 aa, chain + ## HITS:1 COG:PM0989 KEGG:ns NR:ns ## COG: PM0989 COG2056 # Protein_GI_number: 15602854 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Pasteurella multocida # 2 474 5 452 452 434 53.0 1e-121 MNAVVIAIAVMFLLSLARVSVVLTLVVSAIVGGLVAGLSLSQTVEAFNAGLGDGAEVALA YAVLGAFALALSKSGLPDLLAHKLIGLLGMEAGKSRETKVKYLLLGILLIAAIFSQNLIP VHIAFIPVLVPPLLRVMNHLKLDRRAAACVLTLGLVGTYIFLPVGFGAIFLEQILMGNIN KIGAAYGLHVERGMMPIGMAIPVLGMVLGTLVAVFISYRKPRIYADRSISPVTTIDLDKP LRATAQDETADLKADAEELKHEAEQGPVIAKKTIFMALLAIGLTLVAQLYSGSMILGGLV GFAVLSTAGIFKWQDADDVFVQGMRMMALVGFIMISAAGFASVMTHTGDINQLVKGVVEI IGDNRALAAFLMLCIGLFVTIGIGSSFSSVPVLAVIYVPLCVQFGFSPLATIALIGTAAA LGDAGSPASDSTLGPTAGLGVDGQHDHIWDTVIPTFIHFNIPLLIFGWIAAMVL >gi|333032594|gb|GL891832.1| GENE 5 3139 - 3720 744 193 aa, chain + ## HITS:1 COG:YPO2201 KEGG:ns NR:ns ## COG: YPO2201 COG3047 # Protein_GI_number: 16122429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Yersinia pestis # 4 193 2 211 211 76 30.0 3e-14 MFKKVLVVALMGVSSFTFAGNWQVKFGGSVIAPSEDTTTALGVVKADHEYAFTPSVEYFF GQTPFSAELLLATPVNHDVLLDGQKVARIKQLPPTITAKYHFKNSTRFTPYIGIGATAFI PWDEQGVADKVKEDFGVAGQVGFNFQPADAKNWGVFVDVRYADISPEVTLTNGAKFDLDI NPFVYTLGYSYKF >gi|333032594|gb|GL891832.1| GENE 6 3905 - 4258 360 117 aa, chain + ## HITS:1 COG:AGc3508 KEGG:ns NR:ns ## COG: AGc3508 COG4461 # Protein_GI_number: 15889210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria, putative lipoprotein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 11 108 8 110 116 89 47.0 2e-18 MNRKFAMGLALFSGLAFTHSLQAASFSCNAAKTKTELSICKNRSLNDADVKMATTYQIVL HALPMGGRDNQKDTQQQWLKKRNACAANVSCISKAYQQRQKQLDTILQDRVLSHGPF >gi|333032594|gb|GL891832.1| GENE 7 4361 - 6280 2405 639 aa, chain + ## HITS:1 COG:RSc0990 KEGG:ns NR:ns ## COG: RSc0990 COG0326 # Protein_GI_number: 17545709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Ralstonia solanacearum # 7 637 6 639 640 744 58.0 0 MSEQASQNYSFQAEVAQLLHLVTHSLYSNPEIFLRELISNASDACDKLRFEGINHPEYYE NDPNLHVRISLNKEDKTLTISDNGIGLSQQEAIDNLGTIAKSGTKDFMSKLTGDQKADAQ LIGQFGVGFYSGFIVADKITVESRRAGLDASEGVRWISGGTGEFEVQQIDKASRGTDIIL HLRDDALDYLESYKVKQIVNKYSDHISLPIEMQKEVWQEEEVAEGEEPKGGQMVKTDEWE AINSASALWTRNKSEVTEEQYVEFYKNLTHDFEAPLAWAHNRVEGSTEYTQLLYIPSKAP HDIFTREAKAGIKLYVKRVFIMDDADNLIPNYLRFVQGVVDSADLPLNVSRELLQESRDV KTIREGNARRVLTLLDGLAKSEDEKDQEKFKTFYTEFGSVLKEGLGEDFGNRERILKLLR YATSTNDEVTTSFADYKARMKEGQKAIYYVTAESLAAAKNSPQLELFKKKGIEVLLMAER VDEWAMNFVHEFDGTPLKNVSKGAVDLGDLQDAEEKKALEQAAEQFKPVVEKLSDSLKAK TKEVRVTTRLVDSPACLVTSEGELSPQLIRMLKQAGQAVPEIKPILEINPEHPLVKKLEG SEQFDDLANVIFDQAVIAEGGLPEDPAAYVKRINSLLLK >gi|333032594|gb|GL891832.1| GENE 8 6364 - 7266 490 300 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00313 NR:ns ## KEGG: ACICU_00313 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 300 1 300 300 570 100.0 1e-161 MNQFSSFSFEYRSTALLCIYSLGMLVLIPHIQLFPTSLKHSRSTRRTLYSSVVTLKTKSQ SVSFLHSPCEVEPSHSSDTALIQDLMAVFGNDTLWSRAAQHKHPYKTFGKIKKKASTPHV SENNPLTASWNTISTWMPFENDLDLGSNSESDVYVQFLAKKKWNLRHNISLDTEQIFRYG STSRNYTETTLNLTQKMQDNTLFSNTFNVNKSGKEDYNWGNWTFQQFEFVKDNRLTYGIY SGGVYANNDIRLNSWGPYISWRQPIWRDWIFMQNDLNFFNYLDDDPKHQLSVQMNLEANF >gi|333032594|gb|GL891832.1| GENE 9 7388 - 8527 1034 379 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003237 NR:ns ## KEGG: ABBFA_003237 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 379 1 379 379 728 100.0 0 MKTFHIITYRQLFALLTLGFGSVCMAHAEVNSSSTQQVNGLSSGAQTEENKDENLLDQIP RWIDATPTIFPEQSNEPIVPPTEQTEDQTWFDRKQKKIRNWADRTSGKIDNWFGEVDPQK PASATIRVMIDNYWNEYDNYEIKPRIRGKIKLPTLEKRLSVVFGDDSLDDEFNNSPANIN QNPNQDPNKKLDGKRTRDDNSSIALRWSNFSKKLPFETDADLGIRSGDDIYVRLKASRDW QLRNDFKFYAEQIYRYGIDSENYLRTNLELTHARPNQPILSNQFSLTYADDQDDDLTWEN RLFREHSFFANNRFNYGIYTGGYYNDNDLRLNSWGPFVSWRQPVLREWFFVQGDLNYFND HREDRNHYVSTFLRLEALF >gi|333032594|gb|GL891832.1| GENE 10 8886 - 9590 938 234 aa, chain - ## HITS:1 COG:DR0659 KEGG:ns NR:ns ## COG: DR0659 COG2761 # Protein_GI_number: 15805686 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis # Organism: Deinococcus radiodurans # 1 232 12 248 252 150 35.0 2e-36 MRVDVWSDVVCPFCYIGKKRLEHVAAEAGIELDIHWHSFELDPDAPAKHDTSNTERLAKK YGRTYEEMEEMERNIAAMAASEGIDFQWQKANSGNSFNAHRIIHLAQSKGLGNEAKEAFF HAYMTEGLAIGEREVVEEIASRIGLDNAEVEYVLDTNELADFVRHDEKIAHEQLNVTGVP FFVFDQRIALAGAQPREVFLQVLEQAQLKANAENIEQDDAAVCNDETCDIPQNK >gi|333032594|gb|GL891832.1| GENE 11 9768 - 10526 841 252 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3475 NR:ns ## KEGG: ABAYE3475 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 252 3 254 254 401 98.0 1e-110 MRRVLIAIASLVVITSIVFFTYQHIKQQQAKDSSQMFDVVMTEKMNQLYDQAQDWTKPVQ LDIHDKRLAGHYKQVSEFLLSYWVQNVNARNEYLRELKAAKWDTFLNVDRLDHDKKQKYA ETEKMLADVRRASDKYQSEYEKIHKTFLAKIQELSVDKEMRQILEIKLGAQQKADQDHAI FMIELQILDKAEEMFKLLKTYPWQKKDQMILFHENAQVKKFNALYQDVLKLNAKIEKIKK KNVAALEGELKE >gi|333032594|gb|GL891832.1| GENE 12 10547 - 10954 389 135 aa, chain - ## HITS:1 COG:STM4320 KEGG:ns NR:ns ## COG: STM4320 COG0789 # Protein_GI_number: 16767570 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Salmonella typhimurium LT2 # 15 125 1 108 110 79 36.0 2e-15 MLNYDTTVKVNPYFMNLAKVSELTKVSPRMLRYYENLGLIQPHRASNNYRSYTQKDIENI KKIKILNDAGMNLKDIHVLLPCFDLDERVFTLCPVVQEKLQTELKHVSDQLNKLQTSQSL LQSFLAKGKAESTNI >gi|333032594|gb|GL891832.1| GENE 13 11072 - 11629 421 185 aa, chain + ## HITS:1 COG:BS_ydeN KEGG:ns NR:ns ## COG: BS_ydeN COG3545 # Protein_GI_number: 16077593 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Bacillus subtilis # 2 179 3 181 190 107 34.0 2e-23 MRQIFVLHGYSASINDHWFLDLKHQIEDENTTVTLIPFPDSEHPDVDAWQKVLDEQIPAV NENTYFVAHSLGVITLLHFLQRHDYQNIGGMILVSGFSGPISDSSPLSPYITKSKVDTNY FRDIKKKLVYLSDNDDLVPPQLTIQLAKDIDAPYITVPNGGHFLGREGYTEFPQLVDSLK EMLEN >gi|333032594|gb|GL891832.1| GENE 14 11698 - 12381 383 227 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00319 NR:ns ## KEGG: ACICU_00319 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 227 1 227 227 449 100.0 1e-125 MSCLLASFFLTGCVSNRIIGENTRELFTKYDSGYEWITLTEDDVIAFGKPSVSLPNEPED SIVIAGKKYSYVISKGGNDFIQLISQLNPQYIQISNELDFNAPASNSNHFYGHIRFSYTP PNGKLNEKESALFKQYGVIPCDYEKTLELHKFELNLRGTVYPPVNNLKKITPLSKPYHVR IQYLHDKSGKVPLSTKEKLASLPLLPFTLTFDIIALPAKVMGIIYQP >gi|333032594|gb|GL891832.1| GENE 15 12690 - 13181 578 163 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00320 NR:ns ## KEGG: ACICU_00320 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 163 1 163 180 311 100.0 5e-84 MNFLKQSAFIAVFAFMGLPTVQAEEVATLPTIRVMAESELREEVGFVPFQEDKKVRQALQ HREYKTHNDIQNALVPEGMTTVDYQPVMAQPDLSQLSPFLREYILAVAGGIQSSDPTNGL FEMLKPLQINRSNVDAYREGTMKVNLDDILKLQQQIQDGLKGR >gi|333032594|gb|GL891832.1| GENE 16 13226 - 14398 1523 390 aa, chain - ## HITS:1 COG:PA3013 KEGG:ns NR:ns ## COG: PA3013 COG0183 # Protein_GI_number: 15598209 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 3 390 2 391 391 501 66.0 1e-142 MATLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWG CVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIG GVEHMGHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRA WAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAFKALKPVFDPKGGSVTAA TSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAG LSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLL NVMEQQDTQIGLATMCIGLGQGIATVIERV >gi|333032594|gb|GL891832.1| GENE 17 14411 - 16564 2733 717 aa, chain - ## HITS:1 COG:PA3014_2 KEGG:ns NR:ns ## COG: PA3014_2 COG1250 # Protein_GI_number: 15598210 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Pseudomonas aeruginosa # 318 717 1 399 399 518 68.0 1e-146 MIHAGNAITVQMLADGIAEFRFDLQGESVNKFNRATIEDFKAAIAAVKANNDIKGLVVTS GKSTFIVGADITEFGQNFAQGEKAIVDWLMPVHEIFNSFEDLDLPKVAAINGMALGGGFE MCLVCDYRVMSEAAQVGLPEIKLGIYPGFGGSVRLSRLIGIDNAVEWMAMATPKKPAAAL KDGAVDAVVAADKLLDAATDLVKQAISGRLNWKAKRQEKLEAVKLNPLEQMMAFNTAKGA VLAKANPAQYPAPKLLLDSLQAGASLARDEALKAEAEGFAKAAVTPQAEALIGLFINDQV VKKASKQHEKGAHPVNQAAVLGAGIMGGGIAYQAASKGTPIIMKDIGNPQLALGMKEANN LLTKQVERKKMKPAQMGETLARIRPTLSYEEFKEVDIVIEAVTENPKVKEIVLAETEKNV RENTIIASNTSTISITRLAKALQRPENFVGMHFFNPVHMMPLVEVIRGEKTSEEAIATTV VLAQKMGKTPIVVNDCPGFLVNRVLFPYFGAFDLLVKDGADFQQIDNVMSKFGWPMGPAY LIDVVGIDTGVHGAEVMAEGFPDRMKPDYKGAIEAMYEAKRLGQKNDVGFYKYELDKKGK KAKTVDPTAYEVIAPFVTGEKREFDNQEIIDRMMLALCNETVRCLEDNIVATASEADMAM IMGIGFPPFRGGPCRYIDQTGVAEYVALCDKYAHLGKAYEAPQMLRDMAANNKKFYG >gi|333032594|gb|GL891832.1| GENE 18 17136 - 18050 740 304 aa, chain + ## HITS:1 COG:PA4512 KEGG:ns NR:ns ## COG: PA4512 COG3555 # Protein_GI_number: 15599708 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases # Organism: Pseudomonas aeruginosa # 2 299 1 299 299 393 61.0 1e-109 MIKWIILAIFVISALYIQHRGKVRHSFYRQFFDHSTLLAPINFLMYIFSKVPNQPYIDTQ HFKDLKVLDENWEMIRDEAKALYDQGGIKASSTYNDLGFNSFFKTGWKRFYLKWYESSHP SAAELCPKTTALLKTLPTIKAAMFTELAPDSRLVRHRDPYAGSLRYHLGLITPNDDRCFI DVDGERYSWRDGQSVVFDETYIHYAENKTDQNRIIFFADVERPMKVKWMERFNHWFGRNV MTAASSPNETGDQTGGLNKAFGYVYQIRIKAKALKAKNRKLYYFLKWFLMLGIFFLIFVR PYVF >gi|333032594|gb|GL891832.1| GENE 19 18127 - 18216 82 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIESEIDRVVIYGWQGSLIQVFKNDKLID >gi|333032594|gb|GL891832.1| GENE 20 18398 - 18769 421 123 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00324 NR:ns ## KEGG: ACICU_00324 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 123 1 123 123 197 100.0 8e-50 MNTKEFVKELINTISDEYIDTYKQIYSSTLIDNKIKEDPYWFDALTFYQSLSQKDKETLF KIIKQTTIDTTSIILGIIDGPVSLNQIPGDFTLTYTENEKTVILNGDLQDEFLTKIKERD RSQ >gi|333032594|gb|GL891832.1| GENE 21 18910 - 19440 557 176 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00325 NR:ns ## KEGG: ACICU_00325 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 15 176 15 176 176 274 100.0 1e-72 MAHAHHAAHAHVHHIEERKEDRSQGDLKTKVMLRQAASTTEKSKRSRTKNHKTEDQNINL HKFSSKLESISAKHSKEKCAKNIRIALQAAGADVSKHPVAASDWGHTLEKNGYKKIKPAF NRPQEGDIYIIERTSGHTYGHIAGYTGNGWFSDFRQKTYAVYKEKDVKYSYYRLDS >gi|333032594|gb|GL891832.1| GENE 22 19565 - 21373 2003 602 aa, chain + ## HITS:1 COG:PA2585 KEGG:ns NR:ns ## COG: PA2585 COG0322 # Protein_GI_number: 15597781 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Pseudomonas aeruginosa # 16 601 11 606 608 605 52.0 1e-173 MPIVNQNARPHIEKILANLTQLPGVYKMLGKEGELLYVGKAKNLKNRVSSYFVKTIEHPK TQALVARIYDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPR IASGRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFSQRKRPCLQYQIKR CSAPCVGLVSPEDYKEDVNNSIRFLQGDTKELNQELIAKMEQAAADLEFEKAVFYRDRLS LLREVQAQQAVFKVKGEADILAIAYQAGVTCVQIMHVRNGRMLGGKSYFPDMLGDDLGQM LSDFMANFYFQVADEVPSELIVNTALPDRKELEEALAQQFGKKVQIKSSVRETRAEWLEL AEMNVQHAIKGQLSNHLELNERFHQLEQVVGRPIDRIECFDISHTMGEAPIASCVVFDQG GARKRDYRQFAIQDITAGDDYAAMRQALTRRYKKAMLPDLLLIDGGKGQLHMAIEVMQEL GLEAFMVGVSKGEGRKPGLETLHFTDGTKIQLPEDSKALHLIQQVRDEAHRFAITKHRAK RDKRRSTSVLEAIPGLGPKRRRDLLTHFGGIQGVLKASEKELTVVPGLGEVMARTIYKIL HE >gi|333032594|gb|GL891832.1| GENE 23 21494 - 22288 577 264 aa, chain + ## HITS:1 COG:PA2871 KEGG:ns NR:ns ## COG: PA2871 COG1946 # Protein_GI_number: 15598067 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Pseudomonas aeruginosa # 18 263 19 264 265 147 36.0 2e-35 MSLLQLWEDVKQNEWIDIPAGWLQGRTVFGGLVAGVLMQKACSYIQDSNKRLLSCSVIFV GPVQQGAARLTIEVLREGKSVTTLEARLWQDDAVQTILVASFGASRASSIEVKQEPVVPA YVPPENLSVIPFAKHMPECFQHFEVCWAEGNYPVTGSKHPDFGGWSRFSPEQHANRQMTL SDLIVLMDIWPPGVLPMFKQVAPASSLSWHITYVHPVRHQLCDWFKYKVTTEYAAEGYST EYAYLWDQNDHLIAILRQTVTVFT >gi|333032594|gb|GL891832.1| GENE 24 22407 - 22994 276 195 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 11 188 484 665 904 110 37 4e-23 MTTGRILNIPNILTLARIALIPVFLVIAYWPPAIGIGEHVGSMTRHIILTAIFVLAAVTD WFDGYLARTLNQTSAFGRFLDPVADKLMVAAALIVLVQWKPTIAMAFAAIVIISREITVS ALREWMAELGARTSVAVSTVGKYKTAFQMIAISVFLLNWQPLEVLAYALLYTAVILTLWS MFIYLKAAWPYLKQP >gi|333032594|gb|GL891832.1| GENE 25 23117 - 23971 916 284 aa, chain + ## HITS:1 COG:mlr3180_2 KEGG:ns NR:ns ## COG: mlr3180_2 COG0350 # Protein_GI_number: 13472775 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Mesorhizobium loti # 107 278 1 173 176 122 37.0 7e-28 MQMLSSRQFAAIATIIEYLYEHLDQQPSLEDVATYMNLSPSYIQRQFQEWVGISPKKFVQ YMSLQQAKYYLMQQRSLLDAALNTGLSGTGRLHDLFIQLEGMTPGEYKQQGDGVELNYSV ETSPFGDLLVVSSDKGICSVRFVDHSENIQEIVKQYFPKAQLKNHSPIWHQQIAQWFRQD FSEHLQQKLPLNLAGTPFQLQVWEALLTIPEGQLRTYQDIAEQIGKPKAVRAVATAIGQN PIAYLIPCHRVIRATGMVGEYHWQKGRKLALLAWEMAKQQGEIA >gi|333032594|gb|GL891832.1| GENE 26 23968 - 24579 451 203 aa, chain + ## HITS:1 COG:VCA0961 KEGG:ns NR:ns ## COG: VCA0961 COG3145 # Protein_GI_number: 15601714 # Func_class: L Replication, recombination and repair # Function: Alkylated DNA repair protein # Organism: Vibrio cholerae # 18 198 20 199 202 138 41.0 7e-33 MTLDLFSPEPCSNLLPYDGEVQDYGCILTAEEAEQYFHYLYQYLAWRHDEAKLYGKHFIT PRKVAWYGDEHYRYKYSGVFRDSLPWDKALAQLKQQVEQILSEKFNSCLANLYEDGTQGM AWHSDSDVSLARTTTIASLSFGATRKFSFRHIQTKEKVEMWLQPGQLIVMRGETQQYWQH RLNRSTKILQPRINLTFRQFKFS >gi|333032594|gb|GL891832.1| GENE 27 24774 - 25547 670 257 aa, chain - ## HITS:1 COG:PA3174 KEGG:ns NR:ns ## COG: PA3174 COG1414 # Protein_GI_number: 15598370 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 32 224 33 218 242 65 28.0 8e-11 MAISSFGKILTVLDLFSVSRPVINVDIICEELGLSKPTSYRYLKELVSADLLKRINGTSG DYTLGSKIAVLDYVSRTTDPLVQISTPFMRNIVERTELCCLLTYLNDDYCIDIHHEIFKD TELLSYGRGCPRPIYVGASPKTMVSHLSKQRMHDYYERFQHELSESGFAVDEPSFIQRMR KIKKQGFYFSQGEIDPNVSGLAVPVRFSSKEVPLALTLVASKNRFDFLNIEKLIEILQEN AALIEQRFMELSEKGEI >gi|333032594|gb|GL891832.1| GENE 28 25873 - 26013 57 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873059|ref|ZP_08441016.1| ## NR: gi|332873059|ref|ZP_08441016.1| hypothetical protein HMPREF0022_00616 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_00616 [Acinetobacter baumannii 6014059] # 1 46 1 46 46 72 100.0 1e-11 MSMLISVRLLLKKDNTTLPFAYKTNELMRASFNTMIFPTSLHDVPR >gi|333032594|gb|GL891832.1| GENE 29 26043 - 28142 1958 699 aa, chain + ## HITS:1 COG:BMEII0531 KEGG:ns NR:ns ## COG: BMEII0531 COG1289 # Protein_GI_number: 17988876 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 11 660 9 657 698 258 28.0 4e-68 MLLKQILAFRPSKLDLIFAIKTFIAGMLALFVSFELDLINPMWSIGTVLIIANPYSGMVS SKCVYRLLGTVGGAIIALTITPHLINTPWIFTVVLSLWVGFALYVSLLDRTPRSYAFMLA GYSTAMIVYNAITYIDQYNIFDIALARVLEISIGVISSAVVSATILPMHIGSAIKQRVTK TLKDTENLFANLLNADQQQNNTQLLAAITRDTTDIHALAVHLSYEKGELHGMTKPLQEML HQMSMVVANLVALSERIKQLQELNFIESHSDKLKQLSGHVIHFLEQKDQMTDENILQLPD EFENDFLNLNDSASEHQQVLLAAMKMDVRHFISNVLAVKVLWQRIKQGNKEIPDNITPMT TTYPSLHRDHGVAVRGGISAVLITFIVTGVWILSGWKAGFMMAQIGAVTACILTALDNPV PVLRIFIWGSVASAVLVFIYAFGIFPYVTTFWELGLVLLPMFLFAVSMMANQALMPVGMV LGINTMMGLNLHNAYSMDAVSYLDSSFGMVMGVLVSLVVIDVVRAMSPDTSANRILALHY RAMRQAIYIPYGIEFKVHLRGMLDRVGVLNTKMVQSEEIKKSIQQALVESSAIIDLSRLQ ELANQVPTSSELAHHIGRLQQDLDELFRAKENEKGESDVLVQHIHQTLFELKQLASNIED MTLRQRLFISLNNIAYSMCHVSSNQMNADRTLTGATAHG >gi|333032594|gb|GL891832.1| GENE 30 28135 - 28341 76 68 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3457 NR:ns ## KEGG: ABAYE3457 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 68 12 79 79 112 100.0 4e-24 MGEFNVYGIYVPALLVQAIFAYICFRWLSPLTNKWIAQGWIALPSIFNLCFYLLLLLVIH QIFVGLGA >gi|333032594|gb|GL891832.1| GENE 31 28381 - 29382 1336 333 aa, chain + ## HITS:1 COG:BMEII0533 KEGG:ns NR:ns ## COG: BMEII0533 COG1566 # Protein_GI_number: 17988878 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Brucella melitensis # 11 332 10 285 285 234 41.0 2e-61 MNQLELKKVIRPVILIVALMIAVYTIVHLWNYYNAAPWTRDGRVRGDVIQVSSDVAGLVT EVLVQDNQTVKKGQVLFKIDVSRRALDVEQAKSDLAKAKAAYAQAQAGLAQAKANLIKSS TNIKLAEKNANRYSNLMDGAISKQEQDQVFATRDQSHAEHEQLQAAIQQAEATIKQQQAL VEAATSNLHLAELNMHRAAVVAPADGTLSNFDLRPGNYVQVGQAVAALLDRKQLYVVGYF EETKLDRIHIGDEATVQLMGDRQKIKGHVQGIASGIEDRERSSSSKLLANVNPTFSWVRL AQRVPVKIVLDEAPKNELAFVSGRTATVHIIEK >gi|333032594|gb|GL891832.1| GENE 32 29439 - 29879 414 146 aa, chain - ## HITS:1 COG:PM1870 KEGG:ns NR:ns ## COG: PM1870 COG0816 # Protein_GI_number: 15603735 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Pasteurella multocida # 8 140 4 136 140 135 47.0 4e-32 MTATQSKSIMAFDFGTQKMGMAIGQSAIESANPLPLFVMKDGIPNWDQLLKIVKEWQPDL FIVGLPLNMDDSESELSTRARKFARRLRHQTNIETWMVDERLTTREAREELGFYQEQGRA KKLSADSFAAALLIQSWYRNPVGLTP >gi|333032594|gb|GL891832.1| GENE 33 29879 - 30433 724 184 aa, chain - ## HITS:1 COG:RSc0675 KEGG:ns NR:ns ## COG: RSc0675 COG1678 # Protein_GI_number: 17545394 # Func_class: K Transcription # Function: Putative transcriptional regulator # Organism: Ralstonia solanacearum # 6 184 10 190 190 153 42.0 1e-37 MTKQYMTHRCLIAPPEMADDFFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDID ADNVNPHEVLQGGPLRPEAGFVLHTGQPTWHSSIAVGENVCITTSKDILDAIAHNEGVGR YQIALGYASWGKNQLEDEIARGDWLICDADMDLIFNLPYDDRWDAAYKKIGVDRTWLASE IGHA >gi|333032594|gb|GL891832.1| GENE 34 30560 - 32227 1864 555 aa, chain - ## HITS:1 COG:RSc2651 KEGG:ns NR:ns ## COG: RSc2651 COG0497 # Protein_GI_number: 17547370 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Ralstonia solanacearum # 1 545 1 546 569 333 38.0 5e-91 MLTHLTLINFALADHLAIDIEQGFNVLTGETGAGKSLLLDALSACLGERTDTNYVRYGSD KADVTAVFTYQDNSPEAKWLKEHELDDDSGEIHLRRVIFATGRSKAWVNGRPSSLSELKE LGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAEANDVREAYSTWQRNIRQHQAALDA QATRLQRIATLELQIEELEEVIQTDYKEIEQEFDRLSHHEHIMQDCSYSLNALDEAEQNI TQEMSSIIRRLESHAGRSEQLSEIYNSLLNAQSEIDDATSNLRQFIDRQSFDPERMEELN SKLEVFHRLARKYRTQPETLKEEYETWQSELEQLHQLEDPETLAEQVEKSHQEFLEKAQH LDNIRREAASPLAKQLTEQVKPLALPEAHFEFKFEPLEQPNAEGLSFIQLLFTANKGIPP QPLARVASGGELSRIALVMQVMNAEKTEAEVLVFDEIDVGISGGTAEVVGRLLADLAQHV QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVQLDENQIISELARMSGGVEINETTLQ HAKQLRQLKFQASST >gi|333032594|gb|GL891832.1| GENE 35 32342 - 33652 879 436 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00338 NR:ns ## KEGG: ACICU_00338 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 436 1 436 436 901 100.0 0 MKKTLSLPKAPIGMINRHKKTNPAEMNKILNQHFNAFKQAAAQGDYVKAYQHVKKAVSLV PGHPGALSDLAYTELRLRRYDDAYQHYMQSIKASGSNVNTNLYDGLTEVCHHLNKKEEKI KFGRLAISTKKELTKNEPTLNIPTHKPVPFSPNPQENIIAFSLFGANPRYCETSILNTKL AQEIYPEWTCRFYVDESVPELVQQRLQANGAQVVHVSPTQKQLSGLFWRFLVMDDPVVKR FLVRDADSIVSYREKAAVDAWLKSDQWFHLMRDSYSHTELILAGMWGGCTGIFHNIEAHI RDYVATGRYPDNRVIDQHYLRYCIWPTLKQSVLVHDSQQFDENSADFPVYDLTSMQNDQD NFHVGMDNGSPIVTTAVNHPTAEKVYWILFDENHDEVCRYDAIVSKSRNIEVNLPHAFAK KIQLQQWKLQVYPYEN >gi|333032594|gb|GL891832.1| GENE 36 33729 - 34055 364 108 aa, chain + ## HITS:1 COG:RSc2552 KEGG:ns NR:ns ## COG: RSc2552 COG3123 # Protein_GI_number: 17547271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 105 15 117 119 88 41.0 3e-18 MSSTQFDHVTVIKKSNVYFGGACISHTVQFEDGTKKTLGVILPTEQPLTFETHVPERMEI ISGECRVKIADSNESELFRAGQSFYVPGNSVFKIETDEVLDYVCHLEG >gi|333032594|gb|GL891832.1| GENE 37 34157 - 34906 307 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 2 249 4 249 255 122 32 1e-26 MAKPEYYYGVHSVESLLELEPERVLTLFTLKGRDDQRLQKILQLAEPFGISVQKASRDSL EKLAGLPFHQGVVAAVRPHPTLNEKDLDQLLAETPDALLLALDQVTDPHNLGACIRTAAA MGVQAVIVPRDRSASLTPTARKVAAGGAEKVKFIQVTNLARTLAHLKETTHVRVIGTMLD ENALPIQKCDFSGAVVIVMGAEDTGLRPITQAQCDQKAYIPMSGNLQSLNVSVATGMALY EACRQRSEV >gi|333032594|gb|GL891832.1| GENE 38 34942 - 35856 921 304 aa, chain + ## HITS:1 COG:AGc4446 KEGG:ns NR:ns ## COG: AGc4446 COG0697 # Protein_GI_number: 15889719 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 266 6 276 302 65 22.0 1e-10 MSPRTQGYFFVLVTMCIWGGFTLFARLNAQWHISAWDIAALRFAIAFLILMPILIYKKDL AFLWSKHAVILALIGGVIYCLTVYTAFLYAPAAHAAIFLNGCIPICTAIAAYILFRQPFD KHTWVSLAIMITALALMSALMLKSSTSAFGIGDLLLFISAIWWGIFTVLLKQWKLSAWHS MASVAIWSAIIYLPIYLLFLPKHFMDVDPLHLAVQSIFHGVFVVIIATLTYVAAIQRLGA FKTGSIVTLAPFIAAILAVPLLGESLSPSIVVGLVGMGIGALQPWRWFRQDSLTQKIKQQ NTQN >gi|333032594|gb|GL891832.1| GENE 39 35853 - 36449 777 198 aa, chain - ## HITS:1 COG:PA4529 KEGG:ns NR:ns ## COG: PA4529 COG0237 # Protein_GI_number: 15599725 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Pseudomonas aeruginosa # 3 194 5 196 203 183 51.0 2e-46 MAFILGITGGIGSGKSAATQWFESQGIQVVDADIVAREVVEKGQPALQKIQQTFGDWVLQ PDGSLDRRALREYIFQNPQARHTLEQITHPAIRQSIIQQLQNPKSPYVILVSPLLFETNQ HELVNHTLLIDASEQTQIQRASQRDGQNQEQIQKIIAAQMPRERKRELANDIVFNDGLLE HLYQQLEPLHQSYLKRAN >gi|333032594|gb|GL891832.1| GENE 40 36451 - 37311 635 286 aa, chain - ## HITS:1 COG:VC2426 KEGG:ns NR:ns ## COG: VC2426 COG1989 # Protein_GI_number: 15642423 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Vibrio cholerae # 17 284 13 283 291 250 52.0 2e-66 MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPII DHERLTLNKPASSCPACQQPIRWYQNIPVISWLVLRGKCGHCQHPISIRYPAIELLTMLC SLVVVMVFGPTIQMLFGLILTWVLIALTFIDFDTQLLPDRFTLPLAALGLGINTFNIYTS PNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL IGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG >gi|333032594|gb|GL891832.1| GENE 41 37311 - 38537 1480 408 aa, chain - ## HITS:1 COG:PA4527 KEGG:ns NR:ns ## COG: PA4527 COG1459 # Protein_GI_number: 15599723 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Pseudomonas aeruginosa # 35 408 2 373 374 460 62.0 1e-129 MAVKKAQMMPTFAYEGVDRKGVKIKGELPAKNMALAKVTLRKQGVTVRNIREKRKNILEG LFKKKVTTLDITIFTRQLATMMKAGVPLVQGFEIVAEGLENPAMREVVLGIKGEVEGGST FASALRKYPQHFDNLFCSLVESGEQSGALETMLDRVAIYKEKSELLKQKIKKAMKYPATV IVVAIVVTIILMVKVVPVFQDLFASFGADLPAFTQMVVNMSKWMQEYWFIMIIAIGAVIA AFLEAKKRSKKFRDGLDKLALKLPIFGDLVYKAIIARYSRTLATTFAAGVPLIDALESTA GATNNVIYEKAVMKIREDVATGQQLQFAMRVSNRFPSMAIQMVAIGEESGALDSMLDKVA TYYENEVDNAVDGLTSMMEPLIMAILGVLVGGLVIAMYLPIFQMGSVV >gi|333032594|gb|GL891832.1| GENE 42 38567 - 40279 1741 570 aa, chain - ## HITS:1 COG:PA4526 KEGG:ns NR:ns ## COG: PA4526 COG2804 # Protein_GI_number: 15599722 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Pseudomonas aeruginosa # 4 570 1 566 566 653 57.0 0 MSALHTSPKFTGFFRRLVEEKHVSAATMQTALDAAKRAKQDTVAYLIEEVHLSPSLLAET ISAEFAEPYFDLDVYDTSQIPKDLVDQKLILKHRILPLIQRGQILYVATSNPSNIEAIDA IRFNSKLLVEPVIVEHHKLEKVLGQHFAEESSFDFNDEEFDLDVNLDGPTTQEDEEEAPQ GDEAPIVKYINKLLIDAIRMGASDLHFEPYEKSYRVRYRVDGMLRQIANPPLQLANRLAS RLKVMSQMDISEKRVPQDGRIKLKLSKSKAIDFRVNSLPTLFGEKLVLRILDPSSAMLGI DALGYEEDQKALFMEALDKPQGMLLITGPTGSGKTVSLYTGLNILNTESSNISTAEDPVE INLEGINQVNVNPKVGLTFAAALKSFLRQDPDIIMVGEIRDLETAEIAIKAAQTGHMVMS TLHTNSAPETLTRLRNMGVPSFNIATSVNLVIAQRLARRLCSQCKIPADIPKQSLLEMGF TEQDLAHPDFRVFQPVGCPECREGYKGRVGIYEVMKVTPEISKIIMEDGNALEIAAASEK LGFNNLRRSGLKKVMQGVTSLQEVNRVTSE >gi|333032594|gb|GL891832.1| GENE 43 40571 - 41365 981 264 aa, chain + ## HITS:1 COG:NMA0570 KEGG:ns NR:ns ## COG: NMA0570 COG0149 # Protein_GI_number: 15793561 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Neisseria meningitidis Z2491 # 9 259 6 247 251 194 42.0 2e-49 MSGSTITPWVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQA QLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEIL KAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEP IWAIGTGKTASPQDAQAMHAKIREGLCQLTPAGSNIAILYGGSVKAENAVELAACPDING ALVGGASLNAASFYQIVQAFAQSK >gi|333032594|gb|GL891832.1| GENE 44 41378 - 41707 414 109 aa, chain + ## HITS:1 COG:PA4747 KEGG:ns NR:ns ## COG: PA4747 COG1314 # Protein_GI_number: 15599941 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Pseudomonas aeruginosa # 1 78 2 79 129 90 60.0 8e-19 MHSFVLVVHIILAVLMIALILVQHGKGADAGASFGGGGAATVFGASGSGNFLTRVTAILT ALFFVTSLTLAVFAKKQTTEAYSLKTVQTTVPVQTTSPETSPNAPKTGQ >gi|333032594|gb|GL891832.1| GENE 45 42349 - 42873 663 174 aa, chain + ## HITS:1 COG:PA4746 KEGG:ns NR:ns ## COG: PA4746 COG0779 # Protein_GI_number: 15599940 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 3 171 1 148 152 133 44.0 2e-31 MKLSNKSQALYDMIAPAVEACGVDLWGIEFLPQGKRSLLRIYIDRPVDENAEPVINEDGE VEQGRGIGVEDCVRVTQQVGAMLDVHDPISGEYALEVSSPGWDRPFFQLEQLQGYIGQQV ALRLIAAVENRRKFQAKLLAVDLENEEIQVEVEGKHVLDIDSNNIDKANLIYQD >gi|333032594|gb|GL891832.1| GENE 46 42911 - 44395 869 494 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 470 9 471 537 339 40 7e-92 MGREILTVVETVSNEKGVSREAIFEALEQALVAATKKKFYEGTNSEEAQLRVEIDRRTGD YRTFRQWTVVADEDHEMPACQDAISDVDPAKWSIGDVRELEVESIEFGRIAAQIAKQVIV QKIREAERALVADAYESKVGELIYGEVKKQTKDGFIIDLGDNAEAYLAREEMIPKEILRP KQRVNAILYSVNREGRGAQLLLSRAKPEMLIALMKKEIPEISEEIIEIKAAARQPGVRAK IAVKTNDHRIDPVGACIGMRGTRIQAVQQELNGERIDVVVWSDDPAQYIASALEPADVSG IVLDEDAKSADIIFATNDQLARAIGSQGQNVRLASDLTGYKLDMMLEEEYRARQQNEAQQ YLDMFVSRLDIEEDLAMALVEMGFTSLEEIAYVPAETFDEIELDAELVELLQSRAKEAAL TDALKQQENIQEPSADLLNMEGMTSEIAYSLAARGIITVDDLADQATDDISDIEGLGHDK AGQLIMKARESWFN >gi|333032594|gb|GL891832.1| GENE 47 44406 - 47105 3473 899 aa, chain + ## HITS:1 COG:YPO3496 KEGG:ns NR:ns ## COG: YPO3496 COG0532 # Protein_GI_number: 16123642 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Yersinia pestis # 1 899 1 883 884 700 50.0 0 MTDKSIKELALSVGRPVEKLLEQAREAGLPQRTADDIITTEQQDTLVNYLKKVHGQESGN TGKIALKRKTTSTAKVASTSGKAKTINVEVRKKQVFAKPNPEQIAAEAKARAEAEAKARA EQQAREAAEQKARLQTEQKAKATLDAMRAAHQQDSAAQSAPKAAVVVKKRGGGTVKPAPK PAETLEQKKAREAQTAQLKATEEAARRKAAEEAQQRTLEQMRKMASKYSNDDATATIRVI DDSPLASGLVGQAYEDSFNQEDREIKRGGATTNPRAGKKGGRRGQEEQSFVNHNKRGLKS SQANKHGFEKPVKKQVYDVEIGSSIVVADLAQKMAIKVREVIKTLMKMGELVNQNQTIDQ DTAALVVEEMGHNPVLVSDTQAEDNLLEAAEEARGEQTTRPPVVTIMGHVDHGKTSLLDR IRRSKVAAGEAGGITQHIGAYHVETDKGIITFLDTPGHAAFTSMRARGAKATDIVVLVVA ADDGVMPQTAEAIDHARAAGTPIIVAINKMDKESADPDRVLNELTTKEIVPEEWGGDVPV AKVSAHTGQGIDELLDLILIQSELMELKASAEGAAQGVVIEARVDKGRGAVTSILVQNGT LNIGDLVLAGSSYGRVRAMSDENGKPIKSAGPSIPVEILGLPEAPMAGDEVLVVNDEKKA REVADARADREREKRIERQSAMRLENIMASMGKKDVPTVNVVLRTDVRGTLEALNAALHE LSTDEVKVRVISSGVGAITESDVILAESSEAVLLGFNVRADTAARQKSDQDGIDIRYYSI IYELIDDVKDAMSGKLAPEHRETILGVAQVREVFRSSKFGAAAGCMVMEGVIHRNKPIRV LRDDVVIFQGELESLRRYKDVVDEVRAGMECGLAVKGYNDIKPLDKIEVYDVQMVKRSL >gi|333032594|gb|GL891832.1| GENE 48 47105 - 47506 511 133 aa, chain + ## HITS:1 COG:PA4743 KEGG:ns NR:ns ## COG: PA4743 COG0858 # Protein_GI_number: 15599937 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Pseudomonas aeruginosa # 6 133 7 128 129 99 46.0 2e-21 MAGGQRLKRMADSVQRELSELIRQELKDPRLGGLVTISGVKVSPDLGYADVYVTVMGREL SDDQNEVAHRETLDILNKASGFLRQELSRRIKTRITPRLRFHYDKTNAYGNYMFGLIEKA VQDLPKRESDDKE >gi|333032594|gb|GL891832.1| GENE 49 47563 - 47967 445 134 aa, chain - ## HITS:1 COG:PA1059 KEGG:ns NR:ns ## COG: PA1059 COG1320 # Protein_GI_number: 15596256 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhG subunit # Organism: Pseudomonas aeruginosa # 1 92 6 98 115 92 52.0 3e-19 MQITMEIIVSIFLVFGAFFMLVGSIGMVRLPDLFMRLHAPTKSSTLGLGSFLIASMIFFA FQGRFGFAELLITLLAFITAPVSANLIAQAALHLRLRSLSGEVPEAIERPLPWDRYKIGQ RFSQNKPPMEPPQE >gi|333032594|gb|GL891832.1| GENE 50 47980 - 48255 382 91 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00353 NR:ns ## KEGG: ACICU_00353 # Name: not_defined # Def: multicomponent K+:H+ antiporter subunit F # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 91 1 91 91 117 100.0 1e-25 MTILPYALGISLVAITISMLLCLFRMVMGPSIVDRLLALDTLFLNATCLIIVLGIYWTTT SLFEGALLVAMLGFVSTAALARYFTTGHVID >gi|333032594|gb|GL891832.1| GENE 51 48252 - 48779 423 175 aa, chain - ## HITS:1 COG:PA1057 KEGG:ns NR:ns ## COG: PA1057 COG1863 # Protein_GI_number: 15596254 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhE subunit # Organism: Pseudomonas aeruginosa # 3 165 6 169 174 94 39.0 8e-20 MQLSKLLDRWFPHPFVSFLIIIFWLMLAHSLDASDLLMAVILGLVIPRLVRPFITRTPHI HWKPAIKLCFVVLWDIIVSNFRVAKLVLGSPKKLHPKWYRVPLETEHEQVNSLLAMIITT TPGTVSAGIDQERGDILVHSLSTENTESDVQDIKQRYEAPLMEIFDVKSKSEDNA >gi|333032594|gb|GL891832.1| GENE 52 48782 - 50593 1667 603 aa, chain - ## HITS:1 COG:PA1056 KEGG:ns NR:ns ## COG: PA1056 COG0651 # Protein_GI_number: 15596253 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit # Organism: Pseudomonas aeruginosa # 46 524 27 495 499 319 44.0 1e-86 MFDFLSFWQANTPIFSILIPAFTGFILLLLGNPGAGALKEDWRQPWRRGISLISAIAGLI TAVSYLLVANTGQITVYQLSEWSAPFGIVLVLDRLSAFMLVLTYALAVPVLWYASENWDT RGRYFHAIFHFLLMGLCGAFLTGDLFNLFVFFEILLMASYVLLLHGQGKPRFQLGVHYVI INLLASALFLIGLGMIYGSVGSLNMADVSRLLPTLDADQHKLAVAGALLLFVVFGIKAAM LPVGFWLPKTYAVASTPVAAIFTIMTKVGIYAILRVNGTVFNDVLSQEIFKSWLLPIGLV TSLYGVIGAIGADRLRRFVGFMVLSSIGTLLIAIAMSNTQAWSGALFYLVHSTLIGAAFY LFCGWMTSQRGDFKDHLKIAPRIKQEKAAMLTYFLIAMMLAGLPPFSGFFGKVFILQATV ETAYQGWVIGIVLLVSLLSIIALTRVGFILFWRASPPEEDPINPAYIIYRALPEKAPPRN DTVIYILLAGLVAYVAFASPVLHYTTNTAQQIQDHALYQQSILKTDQNGEVISVQPYDST YLPETKYGGEVEDHNAYLIPDIISKDTFNGEHISEYKHRQIQQQEKLQTPTIADESQLKP MEP >gi|333032594|gb|GL891832.1| GENE 53 50593 - 50961 448 122 aa, chain - ## HITS:1 COG:PA1055 KEGG:ns NR:ns ## COG: PA1055 COG1006 # Protein_GI_number: 15596252 # Func_class: P Inorganic ion transport and metabolism # Function: Multisubunit Na+/H+ antiporter, MnhC subunit # Organism: Pseudomonas aeruginosa # 4 110 1 106 112 115 64.0 2e-26 MISLEFLLATAIGLLVATGIYLILRARTFPVVLGLAVLGYAVNLFLFAMGRLQVSSPAIL TETTNITDPLPQALVLTAIVIGFATTAFIVQLALRSRYESGSDHVDAKEDISPTYDPRED EP >gi|333032594|gb|GL891832.1| GENE 54 50958 - 53807 2535 949 aa, chain - ## HITS:1 COG:BMEII0770_1 KEGG:ns NR:ns ## COG: BMEII0770_1 COG1009 # Protein_GI_number: 17989115 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit # Organism: Brucella melitensis # 17 557 16 553 562 476 50.0 1e-134 MDTSVLPIIILLPLILGTTLVSLLQRFSRGVTALGAIGVSLTSFGLLLTQAKTVLGGASI QQSWDWLPQLGINLSFRLDALGLLFSLLITGIGTLIYIYAYYYLGPKNSLSKLYLLLMLF MAAMLGISLSNNLIILLVFWELTSISSFLLVGYWSHYEAAQRGSRMALTITGMGGLAMLG GFVLLGQITGTYEINDIVGMKDLIQSHYLFVPTLLLILLGAFTKSAQFPFHFWLPNAMAA PTPVSAYLHSATMVKAGIFLLARLAPIFIGAALYHNIVTFVGLFTLCMAACFAIFKEDLK GLLAYSTISHLGLIVCLLGIGSPLAVAAAIFHIINHATFKAALFMIAGIIDHETGTRDLR KLSGIWQLLPFTATLTMITAASMAGVPLTNGFISKEMFFTELLASLSGSTVIFASIIATL AGIFAVSYSIRLVHGVFFDGPVGKQVPNKNAHEPPIGMRAPAILLATLCILVGIFPALLV EPLVNSVTRASLMQPDFAGTHLAIWHGFNAPLIMSIIALVGGTLFYFALAKDGMIRKIDL DPRLGRLQGRILFDLFLKHLLLTSRKIKQKTENGSLQSYLFLIIAFSIVMVTLPLFNQGL TTGTRELTHAPWIAVVLWLTLFSGCWMMLWFHHERIKAVLISGAIGLVVTMVFVTMSAPD LALTQITVDVVTTVLLLMSLSLLPQLTPYESRRSRRWRDAALAIIGGLGIGWITWLILTR DHNSISWFFAQQSLPLGGGSNIVNVILVDFRGFDTFGEITVLGIAAIGALCLMDGMRVHG TTMTQGLTYRFNPSPLMFRITASWVLPLALVVSVYIFMRGHNYPGGGFIAGLITSMALII QYIALGQDQAEQMLKAQSGRLYEIWIGSGLTIAGLTGIAAWFWARPFLTSAHVYVELPVL GKLHLASAASFDLGVYITVVGATMLLISVLGDSRHSSMSGPVPHGEKSS >gi|333032594|gb|GL891832.1| GENE 55 54122 - 55504 1160 460 aa, chain - ## HITS:1 COG:VC2386 KEGG:ns NR:ns ## COG: VC2386 COG3950 # Protein_GI_number: 15642383 # Func_class: R General function prediction only # Function: Predicted ATP-binding protein involved in virulence # Organism: Vibrio cholerae # 18 415 77 455 540 93 23.0 9e-19 MKLESIQFKHIALFHDLKIQFQYDKQPITLILGEQATGKSMLLKHIYHALTWFPARLKDA RTPGIVMPDQDISHSRLQSKIEVSIQIPPEFGQLPETASTQQTDTSLCSWKLFKTLNSSG VGISQVETQQLDQTITLYHQVTRKDPLQGLPLLAYYPSERFVNDINLLNKNLPGITQSIS AYDISFIPFTTFARFFEWLREISDIENAQAAHVVQRIISKQSNSQDQEEILRQLQLELAG HPKQLPSPNLYALKSTLKIIFPELEDFYLQYHPKLQLMAHYKGEVLAFQQLSNTTKTWIA LVGDVVRRLCLLNPLSLDPCLEGEGVLLIDQIDSQLDAAHCSEILNRLHRAFPRLQIIVT GSREELLEHAAVYQCFKLEHGKISPLDLSTTQQQLEHLYTLLQRDEALTPHIDPLPLDTE PATTQIDSLYQQIQNLNEQQKNELLRMIHAGDTSEETSSL >gi|333032594|gb|GL891832.1| GENE 56 55528 - 57030 1262 500 aa, chain - ## HITS:1 COG:SPBC336.01 KEGG:ns NR:ns ## COG: SPBC336.01 COG0210 # Protein_GI_number: 19112913 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Schizosaccharomyces pombe # 10 483 274 783 878 167 31.0 4e-41 MSNIEKPKATYEQAIAIDNARLGQSFKVIAYAGTGKTTTLQMISDAMPERRGMYLAFNKA IAGEAQNKFHRNVDCRTFHSLAFRSVPRGVTDKLRLPRLSPSFIAKEYRLEPITLRRMMG GRYEKYVLMPSRLASLVANAVSYFCSTSSQYPAPRHIQAPNWLHPDDITALQTHLYPAVE RRWLESIDPNHQAGIGHDIYLKLWALSEPNIPADYVLFDEAQDADPLMLGILLRQKSTQV IYVGDAHQQIYAWRGAVNAMQQLPLPESRLTTSFRFGEAIADVANALLGGLNETVPLLGN PNQKSSVVNKPHTKMRDAILCRTNARAMELLLAGLVHGDKVSLQADHQKLNRFVDAASLL KQGKRVTDVPELAWFNSWHDVHEYCETNEGSDIKPLVKLVDDHGTDPLKKALAKITPLEQ ADYVISTAHKAKGLEWNRVHIEDDYQFKINGLEHKITDEELRLLYVACTRAKVSLNIHHL YDLIQQLKLRAPLSLRQSVG >gi|333032594|gb|GL891832.1| GENE 57 57040 - 57813 1035 257 aa, chain - ## HITS:1 COG:PA5066 KEGG:ns NR:ns ## COG: PA5066 COG0139 # Protein_GI_number: 15600259 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Pseudomonas aeruginosa # 6 128 4 126 134 184 68.0 2e-46 MNNTQWLDEVKFNEQGLIPAIAQHHQTGRILMVAWMNRESLALTAEKNQAVYFSRSRQKL WHKGEESGHFQTVYEIRLDCDGDVIVLQVEQHGGIACHTGRESCFYRKLTPQGWEIVDAQ LKDPTAIYGDKAKAESHDHAHTTEQVDVLAHLGQLMQERKQAEADTSYVASLYKKGINKI LEKVGEEGVETIIAAKDYAAQNTESNLNDLIYETADLWFHSIVMLGYFDLNPQLIIDELG RRQGLSGLVEKANRNKV >gi|333032594|gb|GL891832.1| GENE 58 57967 - 59280 1012 437 aa, chain - ## HITS:1 COG:mll1411 KEGG:ns NR:ns ## COG: mll1411 COG0654 # Protein_GI_number: 13471440 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Mesorhizobium loti # 7 410 17 406 421 190 35.0 5e-48 MKTPHFAIIGAGTAGLATAILLAREGNHVTIFEQVDELSPVGAGLLLQPAGLAVFEHLGV LDKALTLGAKVTGLEGQLPDKRLLVNSHYREASTNLYGLGIHRATLCHVLTQKLNEYSSQ ITWYMNHSVERFEEHNDEVQIFGSHQNQKFDACFDGLLIANGARSQLRPKAWVKVNKAYP WGAAWSIVPECQVLDPEILHQFYDRSKIMMGILPTGAIPTEPQQRLSSVFWSLPTPQLQS FLQDEQAKQAWLKQVSERWPKVAEWLKEILYNCQTQPKWLSANYRDVVMTQFGQGRIGVI GDAAHAMSPQLGQGANMALLDAWAFSQSLRQAQKNQNIDWPLLWQHYHQFRGSSTQFYQF LSRLLTPLYQSDHWWAGGLRDLVFPWMYQIPYFRKEMAITISGLKTGPFRHLEYDQVAQL PKESSTFHLKSESLADF >gi|333032594|gb|GL891832.1| GENE 59 59405 - 61024 1791 539 aa, chain - ## HITS:1 COG:STM3972 KEGG:ns NR:ns ## COG: STM3972 COG0661 # Protein_GI_number: 16767242 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Salmonella typhimurium LT2 # 1 509 1 511 546 374 40.0 1e-103 MIPHVSRLLELWRIAAHYRLDTLFPADELPVKAKHALNIIKMHPAAWSSRERKNPLKLKE ALEDMGPLAIKLGQLLSTRRDLIPPEILAQLVLLQDQVKPFDGEVAKQRIQDSLKADVNT LFARFDDQPLAAASIAQVHTAALHDGREVVVKVTRPDIRSQILQDFEILAWLGNTLESRL EAARALHLSEIIQDYRQIILNELDLSIEADNTRRMRHYFTGSTMMYVPEVYMDTKDVMVA ERITGVPISDTATFDRLGMDRAQLAEKGLTIFFTQVFRDNFFHADMHPGNVFVETINPSN PRFIALDCAIMGELSKHDQMTVARMLLAVMNSNFMQLIQIVHQAGWIPPGTDQDALAREM RRTVGPMVSKPMDQLDFAGILIQVMDIARRFHLEIPPQLMLLLKTLVHVEGLGTDLYPQL DIWKLAKPILTEWVKSNMNPVKNVKELGQQLPDLLLGAQDFPSLIIDSLNGLKNQSAWQD RQLREIQQLRLQMEHQQRRSWMFGSTMLILLTIAIISPWFVSIILIVLSSLLALWRVLK >gi|333032594|gb|GL891832.1| GENE 60 61037 - 61705 766 222 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00363 NR:ns ## KEGG: ACICU_00363 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 222 1 222 222 395 100.0 1e-109 MWSILALGAVERIIHHLIDLDALTRIQLNQLQGKMLRVIIDSPQLSVDVFFDQEKVRLEP TVTGHSEKPSIFEQRPFDPQFKISEATATLHVKDVVELIKLLLSDPDQIGNIPLQGDYHL LQDIQKIMQQAEPDLAAHLSKWVGPQLAHEIGKIQLAPKHLKRSLQSHLFFAEDALKEDS GLFAPRWEMDDLNQATRKLNQDIDRLEAKLQQLNAQLQPTQD >gi|333032594|gb|GL891832.1| GENE 61 61717 - 62664 340 315 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 92 314 1 221 221 135 34 2e-30 MSNENQKPTSPTEQAQSSDKVSPFLSSPLPQGTPQGQQQSLQQTLTDTPVSGSVPKYNLP RGAGNTGNVGETTHFGYSTVRTEDKAQKVAEVFHSVASKYDLMNDLMSFGIHRLWKRFAI NMSGVRRGQHVLDIAGGTGDLAKVFSREVGPQGHVVLSDINESMLNVGRDRLIDAGCTNV DFVLANAETLEPFADNSFDLVTISFGLRNVTDKDAALASMFRVLKPGGRLLVLEFSKPVF EPFSKLYDLYSFTALPIMGKLVANDSESYKYLAESIRMHPDQRTLKGMMENAGFQNCDYH NLTGGIVAVHRGFKL >gi|333032594|gb|GL891832.1| GENE 62 62813 - 63520 729 235 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003183 NR:ns ## KEGG: ABBFA_003183 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 235 1 235 235 435 100.0 1e-121 MSKLAAFDELLQQYKTFNYHDNPVLAQRLQDVQTWLKERMKETHHDFFNLPEHKLMAQYF LNRLYGGPEFDALAAQIERLLKYAHKAEKVLPENAIKTGTKSVSLAVLATQLDEQVAMQL LEDYPADTVLTDEIMRLTLIKLDQAEARYQQLALLDDLGAALDKYMRSFMMFTAFKMCKG IAQKYHFELMYDFIQDGFSAMKPLKSAEAFIKTFTEKERQIVEKVHSGHPNPFRV >gi|333032594|gb|GL891832.1| GENE 63 63728 - 65146 1330 472 aa, chain + ## HITS:1 COG:PA3455 KEGG:ns NR:ns ## COG: PA3455 COG2326 # Protein_GI_number: 15598651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 15 471 22 490 496 319 41.0 8e-87 MSEQQPKFEIRDEEQLSVDLIEAQYALKESRGKPNAKSTLILMSGIELAGKGEAVKQLRE WLDPRYLRVKADAPRVLTDSEAFWQSYSAFIPTEGQIVVMFGNWYSDLLVTATHVSEPLD DARFDAYVENMRAFEQDLKNNYVDVIKVWFDLSWKSLQKRLDKIDPSEQHWHKLHGLDWR NKKQYDTLQKLRRRFTDDWYIIDGEDEKQRDQFFAQYLLQHMRQLPEHETEVKGKWQQAK IPESLLKPAQEKMDKAEYKKELDKLSKKIADNMRFDKRNVVIAFEGMDAAGKGGAIKRIV KNLDPREYDIHCIGAPERFEARHPYLWRFWNRINEAEKITIFDRTWYGRVLVERVEGFAS PIEWQRAYDEINRFEKDLFDSQTIVVKIWLAISKDEQEQRFKAREETPHKRFKITAEDWR NRDKWDDYLKAAADMLERTSTEYAPWYIVATDDKYTARLEVLRAILKQLRAD >gi|333032594|gb|GL891832.1| GENE 64 65169 - 65675 457 168 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00367 NR:ns ## KEGG: ACICU_00367 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 168 1 168 168 338 100.0 3e-92 MKIDNIPDYIDPSLNLEQIRDECQELIQKRAYVSAGAAIVPIPFFDVVVDLGILSQLIPD INSRFGLAPEHVSVYDPKTKTIHWDELRKRGFQFSGFVVARTTVKKTFNGFFGKIVTKQV TKFVPLGGQLVAASLGYFMMKKIAQTHLNDSYNLAKRIQQKSRGTVVN >gi|333032594|gb|GL891832.1| GENE 65 65847 - 69482 3057 1211 aa, chain + ## HITS:1 COG:VC2322 KEGG:ns NR:ns ## COG: VC2322 COG1330 # Protein_GI_number: 15642320 # Func_class: L Replication, recombination and repair # Function: Exonuclease V gamma subunit # Organism: Vibrio cholerae # 36 963 33 895 1148 238 25.0 8e-62 MGIHVIQSQRIDVLLQGVLASTSQPSTHPLQVLKAQHFIVPSPAIEQWLIQKLAEQQGMS ANYQFHQRVRGFQWYAYQQVLTAHKEQVRKANIPRLIFKWRVHQALQEFIQPDVMSIDSS HPLHSIVQRIYDSADRLEQGIEKQLKKQKMLYWVAEQVADLFSNYMVYRGQCQRGCENMC TCPNNWLAAWGQGRSLDIEKYIAHKDKEVSAFTLQQTQELERWQRWLWQQHFHEDFMQMQ QIDELFWQELEHPERQKKALSRLPQQIVIFTLLDLPPSQLQFLRRLGQYIDVLILHYNPS QEYWADSVDPLWKQRYDLGVKERFIAKNPQATDAEIADFFNKFTLNFNAEARESRHPLLT RLGKQARDHFSLLSNLSTGEEGKWVDAFVDDFPESLLGKVQSDILHLVEPQAKQYELAPN DDSIQIHVCHSTLRQLEVLKEQLIGWLAKPHEQPRRPNDILVLVPNLAEVEPLIRSVFPA TATEQGVHLPVKIAGIASLDALNAWRAVIGRIHLMQGRFSFDEFADWLGLHATQQRYALE YAQVERILNLLADAGFKRGLDAEHLKRSLCDGDDDYRYSFKFALERLALGIAIPEHATFN QVLSYAKVQPGDFELIGTLIQIYQDLNERRDWLIMHEQKKSHTVEYWLQTLSQDIIEFEQ AGVTALKTAREIVKKQERMLTLASYYAETETGTLRKITLPLPYILDEIQRTLENQTAQAE PTGQITFAQIGQIRPLPYRLIVMLNLDAGQFPNRDTHVPFDLMDALRQQLGDRSRLEDDQ GAFLDALLLAQENLWLFYNGFDVNDGEVRDPSSILQEFREHLALIVKPEPNAPDREVIEG IEIPTQLKQLYHLHYLQPFDPKGFMAENRYIRYQDHWFNVAMQIQQASGVLKPWANISYP LEIPDMLVLDSHQWIQDVTFPARLYLKTLGVENLGNVSVLDQNEPLLLDGLGRYTIRHFL QQNEQQAQPEVLLDQLPVGKVQYSAWQQGIFEQECLLERLHHYAPAVTQTTQRVWRIAKQ LHMNITVPKSETQDWVSMEASSARAKRRAKVWLEYLLWLAYLNEGSAGTERRRIVVFSDQ TVICKGISSEQARQYLQPWFKIWRYAQQQPLVLPAALLLKPLEKAKAYQWETTNPTEKIK LDEKSYAELLKYWNETGTFTSIDMTQNEACKLHQDWRFILQEQDAQALLQHACDEFAYDL YHPVFQFQHSE >gi|333032594|gb|GL891832.1| GENE 66 69486 - 73184 2781 1232 aa, chain + ## HITS:1 COG:VC2320 KEGG:ns NR:ns ## COG: VC2320 COG1074 # Protein_GI_number: 15642318 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Vibrio cholerae # 19 1224 21 1190 1208 299 26.0 2e-80 MNSRVQVSYQPIIDIEFSGLHLIEASAGTGKTYTLSSLMVRIFLEKYLPGQVIATTFTRA AAAELKSRIRARLVETHRYLDAKRSLTEKEILLQAEQESDLLLQHILKHFATRIAYACER LKLVIDQLDELFVGTLDSFSQKLLREFAFESGKIERAQITDDAKTYSRQLIHDVLREWIQ SQPQTVIDALYLAGELKSVDSFVKLVEDSLNFSSAHFKLPEKPTIQFEQLAQLKQLAAEI DISLLEPYYSLDGDHYKHVSGTIFRNGAFNKLFSECLPQLLQVLKQSDSILVFDGSLAIQ RELVFKFLGQLADQKVFKKCPAEISDGFYQHPCIQQIQQLFGVLKNYAEQFDQLHIYLKA YLCIEVKKRLPQVLQNKGETTFSQQIRTLSEALKGEQGQRFAVFVQARYPLILVDEFQDT NQDQDDMLASIWRHPERYQKGCMIMVGDRKQAIYGFRGGDMLTFLNAYKDIQAKHGREYK LIHNHRSVADLVEVVDALFQRQIDFGEQVQYDPIRAGTRPHPVLIDQNQPNPHPLRWLML KDKETEAQQVAWKIRDLLNQSHAGQLYFQKDAQTQTLNEDDIAVLSRNHDGLDKVQFELE RLGIRVNRPSKRSVFDCTIAQDVGALLTAILHPYDEAKVKRALISRLFAMDLKQLLQLEQ TAEGLSQFMTGFDTIRELWSAQGFLVAWQQCLNQFGIWKNLVAVQSKDNERVVVNLRHLT EILSQHSEKYQGAQNLYHWYLKQLQSPLDREWELERRLSSEAGVQLMTIHQSKGLEFKIV FLLGADKPFRENNKTLNFSTQDITVSESAQTLTQRVVAIADKTYLNENELKQHEERALAE QNRLWYVALTRASHRVYALLQDTDGKSVSGLAFWKNRAEPFQHRCCTDEIILEQPPAARH LNQHINIIEIQAQHFPDQRFYSRGKTSFSYLAQHLRHKVGTDLLASQSHEAVLAEDELDQ VISVEAPAAQPISWIKSNFPRGTLAGNFLHEIFEHIDFQCSDEWVSEIRRRFKNDYSSLW QDLLIKYQESFPEEQEAEYSLYHAVAEWLQEILSTPLYQGFRLNRLQPEHYLSECPFYLA LSDRVLAMKRIQQLFAEYGMEMPELLEARSARYLNGSIDLVYFDGQRYHIADYKSNYLGE NLADYSVESIAQSMSLASYWLQAGLYLVALHRYLKVKMQNYDIEQHLGGATYLYLRGMNG EAEQGYYYWQPSTEFVLRLDAILGYFAEDKIA >gi|333032594|gb|GL891832.1| GENE 67 73293 - 75044 1539 583 aa, chain + ## HITS:1 COG:ECs3676 KEGG:ns NR:ns ## COG: ECs3676 COG0507 # Protein_GI_number: 15832930 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Escherichia coli O157:H7 # 129 574 154 600 608 205 33.0 2e-52 MDNLNSPEQSDLSWLTTWSTFLNQAPFTAQTQAPEAAYFLQQLIEASLQGDSCIEISPEQ IETLGQLVISAEQAKSQVAPCVHDEQGLALYRYWNLEQRLAEQIRRLKQQPIQPVSCEEH LDLLTDPHQQAALQMVTRQSLSIITGGPGTGKTYTLARIIAVLSQAIPHIRVAMAAPTGK AAQRMQEALQNSFNDPKLLESGLISAELRNQSTQTIHRLLGMGHSQTPRFNQKQPLPYDV IVVDEASMLDLNLATLLFEAVPESCRIILLGDANQLASVDVGAVLADLQQIEALSENRVH LQTSRRFAEGALIGQVARFIQMQTSQINHEQILQKFEIDIVQVSELRSIPLETDMPDVVQ LEYLPEESPIALETYYQKLMVDFQGYVQSLKAYIQDDRSLEHIENIVRSFDDYRILTAVR HGPFGLQQLNQYAERWLQQQLGIVTLGGWYVGRPVMMTYNDYQLGISNGDIGLCFEHRTQ PQQFEVYFPSLNKWVAANRLPKSIQSAFALTIHKSQGSEFTHTAVVLDQAAKNLLSQELI YTAITRAKKVVSLLVDPEALLQSFTVRTTRKSGLVEKVNRLVR >gi|333032594|gb|GL891832.1| GENE 68 75761 - 77059 936 432 aa, chain - ## HITS:1 COG:MT3884 KEGG:ns NR:ns ## COG: MT3884 COG1680 # Protein_GI_number: 15843398 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 11 412 10 411 415 232 35.0 8e-61 MKIFSTNTCPVPNDLESVIHHKDEVPAELGGMSEQQVQKIWKSIESLYKTGNYPLITFCL RRQGKILLNRSIGYAQGNSPAGLQENALIATPDTPVCLFSASKMITAMLIHLLDEKGEIN LLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPYVDGDVTPELLFDKDEILRRLYAARPV SPAGNHLAYHAVTAGYILGEIIERVTGQDLRQFVHETIEKPMDMPYFNYGLKPEYRAEVA LNCATGLHPRLGTDHYLNHVLGGGLQLAVDVTNDSRFMDTICPAGNIYTSAEQAGRFFEM LLSGGSYQGKQILSEKTIFRATLPTTGVNIDRTLLIPMRYALGPMLGSNPVGLFGPMTGQ AFGHLGFSNILCWADPERDISVSLLTTGKSVVGTHLPALANLLYQISTQCPRIPRDQRRS LFGSDSHETDLV >gi|333032594|gb|GL891832.1| GENE 69 77272 - 77541 456 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126640438|ref|YP_001083422.1| 30S ribosomal protein S15 [Acinetobacter baumannii ATCC 17978] # 1 89 1 89 89 180 100 6e-44 MALTNADRAEIIAKFARAENDTGSPEVQVALLTAQINDLQGHFKAHKHDHHSRRGLIRMV NQRRKLLDYLNGKDHERYTALIGALGLRR >gi|333032594|gb|GL891832.1| GENE 70 77793 - 79886 2003 697 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 3 696 1 696 714 776 59 0.0 MSMFNIVRKEFQFGQHQVVLETGRVARQANTVLITMGGVTVLVAVVAAPTAKAGQDFFPL TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYYNEIQVTATVVS SDKTMEADIAAMLGTSAALAIAGTPFRGPIGAARVGLINGEYVLNPNFEQMAQSDLDLVV AGTESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAINEFAAAAGAKPSDWVAPAHN EELRAKLKEAFEAKISEAYTIAVKQDRYAALDALHAEAVAQFVPEEDVDGIADEVDYLFE DLKYRTVRDNILSGKPRIDGRDTKTVRALDVQVGVLERAHGSALFTRGETQALVTTTLGN TRDALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAA DRFPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVL SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFAGRMHILNEMN KVISRARPEISMHAPTFEVITINPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF GETKAAAKAAIAKIQAITAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER IANVTDVLKEGQEVKVQVQDVDNRGRIKLTMKDIEQA >gi|333032594|gb|GL891832.1| GENE 71 79971 - 81182 884 403 aa, chain + ## HITS:1 COG:FN0332 KEGG:ns NR:ns ## COG: FN0332 COG0598 # Protein_GI_number: 19703675 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Fusobacterium nucleatum # 57 355 80 348 351 82 25.0 1e-15 MQVYYFYRHQSDGYVFISREKHTEHILEFFWIDSVRSDVVSQNEEWQQKIQQLADVSINE FHMRDIANIEHPCAFDTLEEYDLLIFRKLVTPDDEIKNGESHESVFGLATTPISFIFTPK VLISVREQGNKSIENYIQRLENILCKTLEEQNKTRKLPNSPVDLCLRLLNSMVDGYLDIR SPLTRRVEHWQQQLLQGNRRFKQWHQLFHENMAFQQVENLCEEQIETLQEFRDEIVENYH HVIGEKTHSSQDLLLVRLNDLMSHVERIQKHTLRLRSAIQSAIDLHFSAIANQTNENMRI LAIITAVFAPLTLLTGIYGMNFEFIPGLKSPVGFWIMLGVMLLSTILLLYYFYRQHLVGR GEKSVIDLLAQQHRQDRMNLFWFLEYEPIKQTLKEVEKITRLK >gi|333032594|gb|GL891832.1| GENE 72 81429 - 81758 380 109 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003173 NR:ns ## KEGG: ABBFA_003173 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 109 1 109 109 206 100.0 3e-52 MTTIHYREIVCDGHTFSAEVVDEQCTFDLQQFAQACGQSPDWILQLIEYDILAIDTPPEK HQFMGEDVIRARKAYRLQRDFDASLAAVAVMLDLIDEVQQLRKQLKHFH >gi|333032594|gb|GL891832.1| GENE 73 81770 - 82726 1159 318 aa, chain - ## HITS:1 COG:cbpA KEGG:ns NR:ns ## COG: cbpA COG2214 # Protein_GI_number: 16128966 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Escherichia coli K12 # 3 315 4 300 306 194 39.0 2e-49 MAKNYYEELGVKREASADEIKKAYRKLARKYHPDISKEKDAEEKMQAINVAYDTLSNPEK KAEYDQMLDHPQGFNGFGQGAAQSGFDGARFYRQGFTGGEQADFSGFEDLFGRFGAGFGG GQQQYQRQQRSYRGEDQHASIEVDLDIAYHGSTQHITLQIPTINAYGEPEVQRKTLQVKI PKGMKEGQQIRLSGQGQSGINGGANGDLYIEIQYKDTDRVHVEGSDVYLTVDVAPWEAAL GQGIEVKTPAGPLHVNLPKNAKQGQQLRLKDKGIPNKTPGHLYLILNIVFPPAHSEKEKE AYQQLAEAFASFEPRSSH >gi|333032594|gb|GL891832.1| GENE 74 82877 - 83488 773 203 aa, chain - ## HITS:1 COG:RSp1025 KEGG:ns NR:ns ## COG: RSp1025 COG1280 # Protein_GI_number: 17549246 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Ralstonia solanacearum # 1 174 3 174 207 148 46.0 5e-36 MNYFDYFLFIFSVIIMIATPGPVMILVASAGLKGGYKKALETIFGTNLASLVLIFISVLV LKGVLGINENYLNIIRVLGCLYIGYLGFSILKEVIQAPHPEAIQTVSAQNGGFKKGFLVG ISNPKDIIFFSAFFPQFVSISPHLDLSLTILTLTWIVLDFLTLSLVYIFFRRLSNSHLYP KILGLCGLLLLVIAVYGLYQTFI >gi|333032594|gb|GL891832.1| GENE 75 83627 - 84502 1104 291 aa, chain - ## HITS:1 COG:YPO0139 KEGG:ns NR:ns ## COG: YPO0139 COG1281 # Protein_GI_number: 16120482 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Disulfide bond chaperones of the HSP33 family # Organism: Yersinia pestis # 3 279 5 275 293 201 41.0 2e-51 MSDLRQRFYIEDFPVRGEVVHLEEALKTILAQRDYMLAVQILLGEMLSATALLASTLKIK GRISLQIQANGSFKWAMAECNHLGEVRALADYETDPRFGEATDSSTVLAALVNPVLFINI EPEHGERYQGIVPLDQANLAGCLMQYYDLSAQIPTRIVLASTAQRSGGLLIQLLPRHDEE EQKLVDEDLWPRLTMLTETLKSEELTELSANEILYRLYNEEEVRLPEVEHLKFGCTCSKE RCAKALIQIGVDAVHETLEAQNPIQMDCQFCNTRYEFTAEEALGLFGEHLS >gi|333032594|gb|GL891832.1| GENE 76 84668 - 86509 942 613 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 4 556 9 568 618 367 37 1e-100 MSFLLQATIFLGASLILVPLGKRLGIATVLGYLFTGILLGPSVLNIAHDPEAIMELAEFG VILLMFLIGLELRPQRLWEMRDSIFVMGSLQVVITGIILMLTVLLLFQQHLAASFVIGFA LALSSTAFVLQLLTEKQQLNTTYGQQSFSILLFQDIAAIPLLAVIPLLAGTESTHHGIAY FAAIIATFTGLFLFSRYVMRPFFRFVAKSGATELITAVGLFIILAVVLLMDTLGISTTLG AFLTGVLLADSEFRHELEASIAPFKGLLLGLFFMTVGMTTQLSLLIEMPWLIIGGAIGLL VIKTLVLTAIARYKKYSWNNSLLLGTCLAQGGEFAFVILSLAKSEKILTDALLEPVTLIV TLSMVLTPVIYWIMACKIIPLFHKELPPEYDEIPQQDNPIIIAGFGRFGQIIARIARLQH LGFTAIDNNLHQVDFVRRYGGKLYYGDVTQPDLLRSAGIEKAKVFILAIDDVEDSMNVAR HLRLNYPNLKLLARARDRHHVHLLRDLGVEHIWRETYLSSLGMAYRALRELGISDEQAYN NIEIFRDYDEKLLIQQQSIYTDEQKVFETHRNALAELEHLFESDAQQATSKHDVNLKRHL QPNRIDITRDHEE >gi|333032594|gb|GL891832.1| GENE 77 86586 - 88814 1749 742 aa, chain - ## HITS:1 COG:PA5050 KEGG:ns NR:ns ## COG: PA5050 COG1198 # Protein_GI_number: 15600243 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Pseudomonas aeruginosa # 14 738 6 735 739 632 47.0 0 MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQNLIGIITEK VDPQESFTGHFQLKAISELLDDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQG KPMDVLFHLWKIIPCDNAEALLKRSIKQQDAYQILKLHPAGTTENILNLSGVETATLKAL QKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGK TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQ QAQTGKASIILGTRSAIYTPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQGC PVLLGSATPSIDSYHLVETGKLTALQLNQRAGHALLPKMHLIDLKIVKKQHGISQPLIEQ IKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQ QNKPSILLGTQMLAKGHHFPHVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGE HKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVALLPPYRYAVLIRAESKDRDYT LHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWAQ LVHAPRQHQLRLSIDVDPQEFS >gi|333032594|gb|GL891832.1| GENE 78 88963 - 90168 1176 401 aa, chain + ## HITS:1 COG:PA3102 KEGG:ns NR:ns ## COG: PA3102 COG1459 # Protein_GI_number: 15598298 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Pseudomonas aeruginosa # 1 401 1 404 405 353 48.0 5e-97 MPAYQFTAIDASGKQQKGVLEGDSARQIRQQLRDKAWTPISVDPVEQKDKHQSHGLFQKK FSAYDLALMTRQLSVLVAAAIPLEEALRAVSRQSEKAHVQNLLLSVRSKVLEGHSLAQGM QQSGRFPDLYIATVAAGERSGHLDLILDQLSDYTENRFAMQKKVQGAMIYPIILMLMSFG IVMGLMTYVVPEIVKTFDQSKDALPWITVALMKASDFIRHAWVFIILFAIVGVVAFVRFL KTTAGHYAFDRLTLKLPLFGKLSRGINAARFASTLSILTRSGVPLVDALKIGAAVTNNWV IRDSISQAAERVTEGGNLGTQLERSGYFPPMMVQMIRSGEASGELDRMLERASTMQDREV TTFISTLLALLEPLMLVLMASIVLVIVIAVMLPIVNMNNMI >gi|333032594|gb|GL891832.1| GENE 79 90192 - 90773 794 193 aa, chain + ## HITS:1 COG:PA3101 KEGG:ns NR:ns ## COG: PA3101 COG2165 # Protein_GI_number: 15598297 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, pseudopilin PulG # Organism: Pseudomonas aeruginosa # 49 189 3 143 148 143 53.0 2e-34 MKVKNIQSETAMKQHSESVVSNQFEPTCHSEHSSVSDVCSSSAFGLATRSSRARMKRASG FTLIEVMVVIVILGVLAALIVPNVMGRSEKAKIDTTQITLKGVAGALDQYKLDNGHFPTM QEGGLDALINQPATAKNWMPGGYVKGGYPKDSWKNDIQYVVPGKDGHPFDLYSFGADGKE GGEGNDADIYYQP >gi|333032594|gb|GL891832.1| GENE 80 91040 - 91384 313 114 aa, chain + ## HITS:1 COG:no KEGG:AOLE_17575 NR:ns ## KEGG: AOLE_17575 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 114 1 114 114 142 90.0 6e-33 MKAFLVLDELNQFHWAMLKSVLLILALLPIAEVSLKLWLSTEGSSQIMIGFFALSIVSAW LMVSFFTALKTSVWQTKQMASKYEQLLFKAYRYVPMVFLSSLVAYLSLQLSIAF >gi|333032594|gb|GL891832.1| GENE 81 91529 - 91867 407 112 aa, chain + ## HITS:1 COG:BMEI0491 KEGG:ns NR:ns ## COG: BMEI0491 COG0073 # Protein_GI_number: 17986774 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Brucella melitensis # 4 112 7 115 115 118 55.0 2e-27 MEQIEWNDFLKVELRVGKIIQAEVFEKARKPAYILHVDFGEELGVRKSSAQITKLYQPQD LIGKLVVAVVNFPKKQIGPIQSECLVTGFHNADGDVALCIPEFEVPLGTKLL >gi|333032594|gb|GL891832.1| GENE 82 91869 - 93428 1535 519 aa, chain - ## HITS:1 COG:lnt KEGG:ns NR:ns ## COG: lnt COG0815 # Protein_GI_number: 16128640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Apolipoprotein N-acyltransferase # Organism: Escherichia coli K12 # 24 502 14 507 512 283 36.0 7e-76 MRAYFEKLLDSSQQQKQLPLIFPLLIALFSGAVFSFALAPYYWWWLAILSPALLYATLHN RSAKQAFAIGWSYGFGLWFVGAFWLYTSIHVYGDTNAFLSVCMIAVMALVMGLFTAFQTW IYRRFFPETPLTFAPLWIIFEWAKTWVFTGFPWLFVGYAFTERLLDGYAPLFGIYAISFV VIVLACALVEILRKRIFWIIPAALLVLGAWGASYIQFVQPKAAKPLSVSLIQGNIPQDLK WLTEYQVRTLEIYAGLTQSEWGRDLIVWPESSIPLFQTDIEPFLDAMDAQAKKNHTAWVT GIPYWDVAKSHQVGSPLYYNSIMASGSDSSGLYKKQRLVPFGEYIPLSGLLSWVLPAMQN DISMSGFTRGESDQKPLLIKGHALAAAICYEVAYPNLTRRNAEDSDFLVTVSNDAWFTGT AGPWQHLQMVQMRAKENGRWFIRATNTGVTAFIDQNGHITEQAPIDKEFVLRGDLPAMQG QTLYNRLGDYPILGFAILLLVLGWIYRPRKVDVSYKSRR >gi|333032594|gb|GL891832.1| GENE 83 93425 - 94264 894 279 aa, chain - ## HITS:1 COG:PA3983 KEGG:ns NR:ns ## COG: PA3983 COG4535 # Protein_GI_number: 15599178 # Func_class: P Inorganic ion transport and metabolism # Function: Putative Mg2+ and Co2+ transporter CorC # Organism: Pseudomonas aeruginosa # 22 275 25 273 279 190 40.0 3e-48 MQEEPSPSWGMRGLRKWLGTAPETRDELLKLVQNSRRFLEPDTVAMLEGVLDLPATKIRE VMTPRTAMISMQEDDQLLDILHVLVESAHSRFPVFSADQPDNVVGILLAKDLLPFLTEPN TKLDIGSLMRQPLFVPESARSDQVLRMLKHTQTHIAIVIDEYGSTAGLVTLEDILEEIVG EIEDEHDTADEDAQYIVPDNDHTIANAWMVQALTPIEHFNTVLDADFSDDEVETVGGLLL QEIGLVSDLQGQTVELGNWLFTIVEADARTIHLIRAVRQ >gi|333032594|gb|GL891832.1| GENE 84 94449 - 94706 282 85 aa, chain + ## HITS:1 COG:PA1564 KEGG:ns NR:ns ## COG: PA1564 COG0425 # Protein_GI_number: 15596761 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Pseudomonas aeruginosa # 12 68 9 65 79 74 57.0 4e-14 MSEQPISPTVQLNTRGLRCPEPVMMLHQAIRKAKSGDVVEVLATDPSTSWDIPKFCMHLG HELLLKEEVLDEQNHKEYRYLVQKG >gi|333032594|gb|GL891832.1| GENE 85 94802 - 96514 2005 570 aa, chain - ## HITS:1 COG:PA2953 KEGG:ns NR:ns ## COG: PA2953 COG0644 # Protein_GI_number: 15598149 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Pseudomonas aeruginosa # 4 570 1 551 551 779 67.0 0 MEHIERESMEFDVVIVGAGPAGLSAAIKIRQLAIENNLPDLSVCVVEKGSEVGAHILSGA VLEPRAINELFPNWKEEGAPLNVPVTEDKTFFLLSETTSKEAPHWMVPKTMHNDGNYVIS LGNVVRWLGQKAEELEVSIFPGFAASEVLYHEDGTVKGIQTGDMGIGKDGEPTHNFTPGY ELHAKYTLFAEGCRGHLGKRLIAKYNLDKDADPQHYGIGIKELWEIDPAKHKPGLVMHGA GWPLSETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMYPFMEMQRWKTHPLIKQYLEGG KRISYGARAVVKGGFNSLPKLTFPGGCLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAVFE AIAAGVEKGGDLAVARVTEGEDLFVKELTSYTDKFNNSWLKEELYNARNFGPAMHKFGQW IGGAFNFIDQNVFKVPFTLHDLKQDFAVLKTVDATSFKPTYPKPDGKLTFDRLSSVFISN TVHEENQPAHLKLTDPSIPVNVNLPKWDEPAQRYCPAGVYEIMENDDGSKRFQINAANCV HCKTCDIKDPSQNITWVTPEGGGGPNYPNM >gi|333032594|gb|GL891832.1| GENE 86 96731 - 97312 469 193 aa, chain + ## HITS:1 COG:CC0406 KEGG:ns NR:ns ## COG: CC0406 COG3816 # Protein_GI_number: 16124661 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Caulobacter vibrioides # 19 174 10 165 187 123 41.0 2e-28 MGKIPLSDDKNLMNIAQYLKGVQQSHKRSIPPLEQWHPKHCGKMDLTVKANGEWWHEGQL IKRQALLDLFTKVLWKEEGKFYLKTPVEQIEIEVEDEPLLVNQVDQIEISGDEFLQLTTT NQDVILVDAEHPIFMREYAGELRPYVHVRFGINALIQRQAFYHLVNYGTLVENDKGETIL QLKSGNLHLQLGT >gi|333032594|gb|GL891832.1| GENE 87 97361 - 98227 843 288 aa, chain + ## HITS:1 COG:DR1586 KEGG:ns NR:ns ## COG: DR1586 COG0796 # Protein_GI_number: 15806594 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Deinococcus radiodurans # 12 245 90 319 369 255 59.0 6e-68 MTAIQPLFTELEPMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYG PRSDEEIRELTARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKP AVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPA CLNALREVLQPAVEQGADYLVLGCTHYPFLNEAIHYLFDNQFTLVDSGLAVARQTARILI KNELLCDQMRQNVARIECYVSGNNADALQPVLQNMIPQELTWTLHNLS >gi|333032594|gb|GL891832.1| GENE 88 98348 - 99352 719 334 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003156 NR:ns ## KEGG: ABBFA_003156 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 334 1 334 334 624 100.0 1e-177 MLDTRYQIFISTSGREMQPERMVLSQTLVNMGFFAWGLEYRNPLTTTLARRQIDESDYVV LLLGSQYGEQSISGASYFSLEYEYALSRAKPIVVFMHEQPESRDMHLQETHPQLKEKFLA FRKKLLHEANHIFYFKSPRDLELAVRLNMPLMVEQYMGQGWVPARQAHHLEDEINRLKSK ILQLEQQLSESSIQANEVAPQDVFAFEYQIQAFQDGNFKELKRQRQMTWSQLLSILAKHF ETAMPEENFGTCLNEYLNQDGLEDARQELPRAHAVAGAQINHKALFRIKKQMQSQGWIVP TKIDQQHSLWKVTTKAQKLLLSYKWNHRSTRLKA >gi|333032594|gb|GL891832.1| GENE 89 99426 - 100442 1115 338 aa, chain + ## HITS:1 COG:STM0489 KEGG:ns NR:ns ## COG: STM0489 COG0276 # Protein_GI_number: 16763869 # Func_class: H Coenzyme transport and metabolism # Function: Protoheme ferro-lyase (ferrochelatase) # Organism: Salmonella typhimurium LT2 # 5 323 2 315 320 285 43.0 1e-76 MSFEQKPKVTVILANLGTPDEATVPAVRRFLKQFLSDPRVIEIPKFIWWIILNLFVLPFR PKRVAHAYASVWSTDSPMREIVFEQTQRVQAYLERENKQFDLTVLPAMTYGNPGIDAVLE KLATNPQEHVILLPLFPQYSATSTAPLYDAFAKWIPTQRNLPGLTIIKDYYQHPMFIQAL AESVLAYQEQHGKPEKLLMSFHGIPQPYADKGDPYADRCRITAKLVAEALHLKDDEWAIS FQSRFGKQEWVKPYTDQLLQDWAKQGVKSVQVLSPAFSADCLETLEELAIQNAELFQQAG GGSYAYIPALNSDQAHIDLLAGLVQANLDALTHTLAHR >gi|333032594|gb|GL891832.1| GENE 90 100466 - 101110 766 214 aa, chain + ## HITS:1 COG:STM0997 KEGG:ns NR:ns ## COG: STM0997 COG0491 # Protein_GI_number: 16764357 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Salmonella typhimurium LT2 # 2 209 1 208 215 233 50.0 1e-61 MLQVKIVPVTAFAQNCSLVWDSETKEAVLIDAGGDAAVLKKEVEALGLKVKALWLTHGHL DHAGAVGELAKEWSVPVVGPHKEDQFWLDMIQEVSARYGFPIPQPVKVDQWLEGGEVLKL GEDEFEVRFAPGHTPGHVMFYNKNHGLLWTGDVLFKGSIGRTDFPRGNHDQLIESIQREC FSLPDETQFISGHGPMSTIGYEKQFNPFVASKAG >gi|333032594|gb|GL891832.1| GENE 91 101107 - 101301 181 64 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003153 NR:ns ## KEGG: ABBFA_003153 # Name: not_defined # Def: UPF0243 zinc-binding protein YacG # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 64 1 64 64 116 100.0 3e-25 MPRTFPCPRCGEPSVWEGNEFRPFCSERCKLIDLGAWANDEYRLPTQDAPQQDKGSQHED DYED >gi|333032594|gb|GL891832.1| GENE 92 101395 - 102027 709 210 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00395 NR:ns ## KEGG: ACICU_00395 # Name: not_defined # Def: putative methyltransferase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 210 1 210 210 402 100.0 1e-111 MQIRQFQAQRMQAPRDFTPIENTPICVEIGAGKGKHALLFSGQNPQHTLYAIERTREKFL AMQKQHGLEPRDNLVPVHADALPWVVHALYPAQVEHFFILYPNPEPHNPAQRWLNMPFFE FLLSRLKTGGTITLASNIPEYIEEAEQQLLNVWKLPYQKEKIAQTSARTHFEIKYLERGE LCQQLIMTKPEGYKTRFDEFAPLQGQTHVE >gi|333032594|gb|GL891832.1| GENE 93 102017 - 103222 1161 401 aa, chain + ## HITS:1 COG:RSc3158 KEGG:ns NR:ns ## COG: RSc3158 COG2081 # Protein_GI_number: 17547877 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Ralstonia solanacearum # 6 399 10 419 425 298 40.0 2e-80 MSNKQIAIIGAGPAGLMAAEVLSQYAYEIDVFEQKPSAARKFLMAGKTGLNISHAEPLPQ FIERYDHAEWLKPWVEKWDAVWIQNWMKGLGIDSYVGSSGRIFPVEMKAAPLLRAWLKRL AEQQVKFFYRHRCINLHGTTVTFENQNKQNTETFTQQYDAVVLACGAVSWSQLGSDGAWQ QWMDQSSIEPFQASNAGVLHTWSAFMESCFGEPLKRINAWVEPSQVTHGDIVITHYGLES GVIYKLGRALREQQKQGKSLNLFLDLLPDVELTQLVKKLQASKKQSLTNIWRKAGLDTAK INLIREVVDKALWSQPETMAQKMKALQIKLDGFRPIEESISCAGGVKQDALTERLELKQT SGVFCCGEMLDWDAPTGGYLLTACFATGRAAGEGVHSFLEK >gi|333032594|gb|GL891832.1| GENE 94 103300 - 103710 467 136 aa, chain + ## HITS:1 COG:PA2706 KEGG:ns NR:ns ## COG: PA2706 COG3791 # Protein_GI_number: 15597902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 10 131 4 127 131 97 41.0 7e-21 MSQASPVYQGSCLCQGIRYEIKGDIGDIIQCHCQRCRKSNGTAFATNAPINSADFKITQG EDLVKKFAVNGVYRWFCSECGSPLISSRDAQPELYRLRIGTLDTPLDQKPTMHIFAASKA EWECIHDDLPQYDERP >gi|333032594|gb|GL891832.1| GENE 95 103946 - 104326 449 126 aa, chain + ## HITS:1 COG:PA4383 KEGG:ns NR:ns ## COG: PA4383 COG0239 # Protein_GI_number: 15599579 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Pseudomonas aeruginosa # 19 125 19 126 127 103 55.0 1e-22 MYYPLLSIALGSVLGAWLRWLLGLKLNPIYPQIPLGTVTVNLAGGFIIGFAMAYFAHSDL SPNYKLFVITGFCGALTTFSTFSIEIVTLLQSGKWGMAMLAISIHLIGSLIFTCLGLATY YWVAGN >gi|333032594|gb|GL891832.1| GENE 96 104755 - 105087 541 110 aa, chain - ## HITS:1 COG:no KEGG:A1S_0390 NR:ns ## KEGG: A1S_0390 # Name: not_defined # Def: putative type III effector # Organism: A.baumannii # Pathway: not_defined # 1 110 1 110 110 178 99.0 7e-44 MAQELLAQLQAGTAKFSDVLAYIEARYQHTPTAFQNGAQHNAATENQGSAKVFSFAKLQG LDQAQTLSLFAEHYASVLATPEGTDHQNIRQFMQNGWDGVKFEGQALTEK >gi|333032594|gb|GL891832.1| GENE 97 105340 - 105594 439 84 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126640468|ref|YP_001083452.1| 50S ribosomal protein L31 type B [Acinetobacter baumannii ATCC 17978] # 1 84 1 84 84 173 100 5e-42 MRKDIHPAYQQVLFHDTNADVYFLIGSTIQTKQTKEYQGQVYPYVTLDISSASHPFYTGE VRQASNEGRVASFNKRFARFNRKS >gi|333032594|gb|GL891832.1| GENE 98 105695 - 106993 1200 432 aa, chain - ## HITS:1 COG:CC3312 KEGG:ns NR:ns ## COG: CC3312 COG0661 # Protein_GI_number: 16127542 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Caulobacter vibrioides # 1 326 1 323 451 157 32.0 4e-38 MAKNASSPGKRFMKLAGMTASIATKTVSNSIRNLTADEEQKLAAKTKLFQDIGLQIADTL GEMKGAVMKVGQIASQYKDIFPPEVAKAISKLQRQAPAMPFAAIQQQVERELGKPLNVAF KSFEQEPFAAASIGQVHKAVLPSGEQVVVKVQYPGVDEACESDLKQVRLALRLMGVLKID KKLQDQLFAEIQDSLSAELNYEIEAQNLEVFKTFHSKLDDKIIIPTVYKDYSSRRILTLS LEQGDSIETASSWPIEIRNTIGRRLIRALGQEMFFLKRFHCDPHPGNFAFRQDGSVIIYD YGSVKTLSNEIVYSFKRLVNAARHEDIDLIETELLELHSLAEKGKFPSDLYKLWIEVLLR PLTTTYDFAENSSHHDGMLLVKKSLKYWDVFKPSPDTLMVNRTISGHYWNLIHLKVHDNL NDLFEELVPPSN >gi|333032594|gb|GL891832.1| GENE 99 107251 - 108498 1400 415 aa, chain + ## HITS:1 COG:PA2325 KEGG:ns NR:ns ## COG: PA2325 COG1960 # Protein_GI_number: 15597521 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 25 414 21 410 411 492 64.0 1e-139 MTSLNSSYGRSQAVPLSVFEQSKDAHIIRSDEEAIEIAKQLAQEFAQEASDRDRERRLPL NEIQQFSQSGLWAITVPKQFGGAQVKYRTLAEVIKTIASVDPSLAQLPQNHLAFIEHLRL DAKPEQQQFFFNLVLRGIRFGNAFSEKHSKTVADLTTKLQKTEHGYEINGKKFFATGALL AHWIPIVAINEQGQPYAALVPRETSGVNIINDWSGFGQRTTASGTVELNQVPVREEYLVP IYQAFERPTPAGAISQFIQAAVDAGIARGAIEETIQYVKNHSRAWIDSGLEKASDDPYTI ANIGDLKIKLRAAEAVLDLAGDAIDQAIANTTEEHVNQATLLVAEAKVLTTEIAILAANK LFELSGTRSTLSELNLDRHWRNARTHTLHDPVRWKYHIVGNYYLNGVQPPRHAWS >gi|333032594|gb|GL891832.1| GENE 100 108532 - 109782 1319 416 aa, chain + ## HITS:1 COG:PA2324 KEGG:ns NR:ns ## COG: PA2324 COG1960 # Protein_GI_number: 15597520 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 11 415 14 418 419 445 58.0 1e-124 MTTAQIELEELSVGADYEKVANRFRPIFEKIAQGAIQREKERILPFEPIQWLKEAKLGAV RIPRKYGGDGVSLPQLFQLLAELAEADSNIVQALRGHFAFVEDRLVAHKEHSQEVWFQRF VQGDLVGNAWTEVGNVQIGDVVTRVTKDASGNLVVNGEKYYSTGSIFADWIDLFAYDEVN DRHVIAAIYRHETGVSVIDDWDGFGQKTTGSGTLKVHQVHLPASHLIPFDQRFKYQTAFY QVVHLATLTGIARAAVETFSQEIRERKRIFSHGNGDLVRHDPQVLQVVGKASAQAYASEA ITLKTAEALQKAYESHFAESEVKEHQFNVDAELESAQGQVVISNLVLDLTSQLFNALGAS ASSQVKQLDRFWRNARTVASHNPLIYKEKVIGDWEVNRTDLPFVWQIGASPRAKSA >gi|333032594|gb|GL891832.1| GENE 101 109817 - 111112 1375 431 aa, chain - ## HITS:1 COG:VC1540 KEGG:ns NR:ns ## COG: VC1540 COG0534 # Protein_GI_number: 15641548 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Vibrio cholerae # 3 422 21 445 461 277 39.0 3e-74 MLPILITQFAQAGFGLIDTIMAGHLSAADLAAIAVGVGLWIPVMLLFSGIMIATTPLVAE AKGARNTEQIPVIVRQSLWVAVILGVLAMLILQLMPFFLHVFGVPESLQPKASLFLHAIG LGMPAVTMYAALRGYSEALGHPRPVTVISLLALVVLIPLNMIFMYGLGPIPALGSAGCGF ATSILQWLMLITLAGYIYKASAYRNTSIFSRFDKINLTWVKRILQLGLPIGLAVFFEVSI FSTGALVLSPLGEVFIAAHQVAISVTSVLFMIPLSLAIALTIRVGTYYGEKNWASMYQVQ KIGLSTAVFFALLTMSFIALGREQIVSVYTQDINVVPVAMYLLWFAMAYQLMDALQVSAA GCLRGMQDTQAPMWITLMAYWVIAFPIGLYLARYTDWGVAGVWLGLIIGLSIACVLLLSR LYLNTKRLSQT >gi|333032594|gb|GL891832.1| GENE 102 111197 - 111658 421 153 aa, chain - ## HITS:1 COG:PA4815 KEGG:ns NR:ns ## COG: PA4815 COG3238 # Protein_GI_number: 15600008 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 9 149 8 145 149 74 39.0 7e-14 MMKFSSQLFLILPLAMGIGVAMAFQTAINAQLREQLHSPLQAALLSFFIGTIVLAIMVFF QSAEKPSLSEISNIPWLLWTGGFLGVYAISMSIYTAPKLGFLTFTGLVVFGQLVISMLLD HFGWLGTEKTPVTWQRFLGGVVIFVGVLLTLQR >gi|333032594|gb|GL891832.1| GENE 103 111824 - 112930 1211 368 aa, chain + ## HITS:1 COG:PA0386 KEGG:ns NR:ns ## COG: PA0386 COG0635 # Protein_GI_number: 15595583 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Pseudomonas aeruginosa # 1 368 18 383 384 378 53.0 1e-105 MPWCVRKCPYCDFNSHAVPDGALSAELEQTYLKALVADFETQVEMAQGRSIHSVFIGGGT PSLISAKGYAWLFEQLKSLLNFEDDCEITLEANPGTLEHDPFAGYLEAGINRLSIGVQTF NTDHLQKLGRIHSANNAMDAIEQARQAGFKRVNVDLMHGLPEQTLEQALYDLKTAVEQGA THISWYQLTIEPNTVFFRTQPVLPQDEVLEDIQEQGEAYLKANGFINYEVSAWRKEQPSA HNLNYWQFGDYLAIGAGAHGKVTRPDGVYRFQKTRLPKDYLAKVPAEHLQMKKIEADELP FEFMMNALRLNDGVKAELYEQRTGLSLDDLNDLLTSLRSRELLVEDSDRLACTEQGHIFL NSVLEEFL >gi|333032594|gb|GL891832.1| GENE 104 112981 - 113736 900 251 aa, chain - ## HITS:1 COG:AGl1000 KEGG:ns NR:ns ## COG: AGl1000 COG1028 # Protein_GI_number: 15890617 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 251 17 273 273 291 64.0 1e-78 MTTHSLKDKVVLITGGAKNLGGLISRKFAEQGAKLAIHYNSSETQADAEQTLADVKALGA DAILIQADLTHIENIEKLFIDTKQHFGGIDIAINTVGKVLKKPFLETTEQEFDSMSDINS KIAYFFIQSAGRHLNNGGKICSIVTSLLAAYTGFYSTYEGLKAPVEHYTRAASKEFGDRQ ISVTAVAPGPMDTPFFYGQESAEAVAYHKSASALGGLTKIEDIEPLVRFLVTDGWWITGQ TIFANGGYTTR >gi|333032594|gb|GL891832.1| GENE 105 113849 - 114745 640 298 aa, chain + ## HITS:1 COG:PA2877 KEGG:ns NR:ns ## COG: PA2877 COG0583 # Protein_GI_number: 15598073 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 293 1 296 297 265 43.0 7e-71 MDRLQQFYIFTEVAKRQSFSEVANQLDLPRSTVTSAIQQLETHYGVRLFHRTTRKVSLTQ DGQRILPECQNLLFDYEQLEQLIQTQKQHYRGTLKISMPSRIVHQVIIPELPDFYHRYPD IHLQLNSSDDLTDLIEKGIDCVVRVGELDNSSLIARFIGHLVMVNCASPQYLQDYGVPEQ LNDLEQHKLINYAGAVGEKQGEFIYQGGIVMMDSALSVNNTEAYIAAACAGLGIIQLPYY DVQDKIEQGILVEVLSAYSAPSLPLNILYPNRSYIPKRLEVFMNWVGEVLNRKCIVIF >gi|333032594|gb|GL891832.1| GENE 106 115215 - 117056 1706 613 aa, chain - ## HITS:1 COG:PA2893 KEGG:ns NR:ns ## COG: PA2893 COG0318 # Protein_GI_number: 15598089 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Pseudomonas aeruginosa # 5 613 2 608 608 624 51.0 1e-178 MSQTTQTDIITLGDVATRLPSFIPKVPHILNGLKQAYLRTSNTPTGLGIAFEKAVKRNPK GTALLFEDQSYSYEALNEWANQISHYYLSLGARKGDVIAVMIENRSELIATIVGLAKIGV TIALVNTSQVGKVLAHSINLVKPIAVIAGEEVRAAIDEIRQDLNVPKDRFHWFADQATRQ NSGTAPEGYVNLADQIDQFPKFNPSTTRSVTGNDGLFYIYTSGTTGLPKAVIFKHSRWTL AYGTYGHILNLGPDDVMYVTLPLYHATGVVVCWCGVIAGSATLAIRRKYSTSAFWKDVQK FNASAIGYVGELCRYLMDAPVTELDRNHRVTKMIGNGMRPNIWDKFKQRFGVKEVLELYA SSEGNVGFSNIFNFDNTVGFSPTPYAIIQFDKEKNEPVRDKNGWCQKVKAGEVGLLIGKI TSRSPFDGYTDPEKNKSVIWKDVFKKGDSYFNTGDLVRDIGFRHAQFVDRLGDTFRWKGE NVSTTEVENMVCEYDKIAEAVVYGVEIPNTNGRAGMAAITLADGEELNDADLTEMVTVFK KCLPTYAVPVFLRVQKKVETTGTFKYQKNKLKEEAFNPSKTSERLLALLPGASSYCDITT EIFDNIQAYKYRF >gi|333032594|gb|GL891832.1| GENE 107 117249 - 120581 4144 1110 aa, chain - ## HITS:1 COG:PM0991 KEGG:ns NR:ns ## COG: PM0991 COG1530 # Protein_GI_number: 15602856 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Pasteurella multocida # 1 482 1 484 1004 523 60.0 1e-148 MKRMLINATHAEEVRVALITGNRLYDFDLENRTREQKKSNIYKGHVTRVEPSLEAVFVEY GAGRQGFLSMREIANSYFQADPRQTSNIRELITEGTELLVQVEKEERGNKGAALSTFISL AGRYLVLMPNNPKGGGISRQISGSVREELKEILASLNVPRGMSVIVRTAGIGRTQEELQL DLQHLLDLWAQIQGTASSGPSPMLVHQEAGVVTRAIRDYLRDDVAEILIDSEQAYNEAYN FVKAVMPRQLDKLKTYTLNEPLFAHFGIESQIQTAYEREVKLPSGGSIVIDQTEALVSID INSAKSTRGHDVEETALNTNLEAAEEIARQLRLRDIGGLVVIDFIDMTKERNQRMVEAKL REATQSDRARIQFGQLSRFGLMEMSRQRLRPSLEEATGYVCPRCHGTGMVRDLRSLSLSI MRKVEEIALRERHGEVQVEVPVEIAAFLLNEKRHSLVYLEQTSGVRVTVLPHPHLETPHY EIAYNPDGFAPSSYERTEATRSSEKELGYESSEWHLEEADHGHAHVTATASTHAAAQKKA NHATQPVAQPSAQKAASPCAWLENLFVQKQAQTVDQSRSAQNAAAAIEQMVNTGAVSRGQ FGQVAVPAVAEVAPVQSNNAYISQSPVKQDVREHVEKDDKSQQQRQNNKKRKHKEQREQH HQSHEQQHQVHEEVVQLSRQEQRELKRQQKRQQQQDQQHQNNDVQHTENAVPRRDRNNQQ RPNRPNRHRDPSVLNENQNTPVVIDEKQIKVDVIDAPKHDVMNTALIINVDQGQSEIVAL TPEHRHVERVETTSTEVAQEPTPAPVVAEKAAVVETKEEAQPSQEAAQPQIKRASNDPRM RRRQQREAKHAKAATPSIAPSQIPTLAQHTIGSLIRHVYGEDCTVLIEQFGLVPTFNRAL QKFAEQYASTLVVEVTAETEEKKPVTRDAELPSHKPAEEAEPAPVLPLTPPQAPAPRVAN DPRERRRLAKLAAEQAFEQVKQQHSAQEEVATPAPVAEETVAAPTAETQATVEPAQQPLE LNQSTEVVQPEAAPAEEKATEETVAEAPAAKEPAPSKAASKAKAAAEETVAPTEATTDAE SEDVKADKDKPSRPRRPRGRPPKKANPVAE >gi|333032594|gb|GL891832.1| GENE 108 121304 - 122236 195 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 90 302 76 285 285 79 29 1e-13 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAET KLAIGDQIRVAPIRYEQKDETAVPVSDSVAQGLLSRVVYEDEGLLVVNKPSGIAVHGGSG VAYGLIEALRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDMLREHKIRKTYAAI VKGQVSLDKQLIDAPLFRYELANGERRVRVSKEGKPSKTEWVVAERFKNATLVHASPLSG RTHQIRVHGLSIGHPLVGDDKYGHNTAYTGPEARRLCLHAMRLDIPGYPTIEAPLPEDMT QLLEALRVAK >gi|333032594|gb|GL891832.1| GENE 109 122233 - 122907 851 224 aa, chain + ## HITS:1 COG:PA2974 KEGG:ns NR:ns ## COG: PA2974 COG0546 # Protein_GI_number: 15598170 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Pseudomonas aeruginosa # 7 212 6 215 230 180 47.0 2e-45 MSLKTELVIFDWDGTLYNSVGQIVASLQHAAEEHKLTLTDEAAKSIIGLGLPEVMQTLFP EVPDLHDSILKAYGDHYIANSTNDAWFEGISELLHDLKAQGLKLAVATGKNRRGLDRVIA KTQSTHLFDVTRAANETRSKPDPLMLQEILTVTGVSVEQAVMIGDSSYDLEMAQRLGMPR IGVGYGVHSVEVLQQFQPLTIAKDVPELHNFLREYAKLSTVDVA >gi|333032594|gb|GL891832.1| GENE 110 122981 - 123676 614 231 aa, chain + ## HITS:1 COG:mll3208 KEGG:ns NR:ns ## COG: mll3208 COG2378 # Protein_GI_number: 13472799 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Mesorhizobium loti # 1 219 1 219 229 171 44.0 2e-42 MSRSIRLLNLLQQLRESRYPVTAQVLAERLGISIRSIYRDIDSLRAQGVRIDASAGLGFQ LKEDILLPPVTFNENEAEALFLALEWLKDVPDQAMKSAAVSIYSKLYAVLPEHRKYLIDD MTLGVTHYWHPVDEALVEQVRLAIRKQVKIKVDYCDEHKRISQRSLWPFALGYLHDKVVL AAWCELRQAFRHFRIDRIHDLQMSEEIYPEFKKHLFQRWWKQEMQRTTDKN >gi|333032594|gb|GL891832.1| GENE 111 123726 - 124331 738 201 aa, chain + ## HITS:1 COG:AGc3433 KEGG:ns NR:ns ## COG: AGc3433 COG0625 # Protein_GI_number: 15889171 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 196 4 194 208 156 43.0 2e-38 MSLKLYTNNESRGVVIDWLLVELGVECERIEVAYRTEMKSPEYLKLNPFGKVPVLVDGDV VIYELGAICAYLADKFSDKGLAPALDDPKRGLYYRWLFMMAGPWEAAGVDKALGIEISPE QKMFVGYGDYNDAYQALVQGLSEANPYVCGEQFTAADISVGAMLLWQLKMKTIESHPAIA RYVETIKQREGLKQSSMGQLL >gi|333032594|gb|GL891832.1| GENE 112 124390 - 125067 548 225 aa, chain - ## HITS:1 COG:RSp0410 KEGG:ns NR:ns ## COG: RSp0410 COG4291 # Protein_GI_number: 17548631 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 10 224 15 224 224 123 36.0 3e-28 MVGLFQHLGRSVQNRPHFFIALIFGVVVASLLAWLTSWKWSTILLASWNGSISLYLLHVW KLMRSADHSQMQQQAKKQDESKWVIMLIVLLAITMSLVAILVQLSQLPSGHYEKLGHVAL ALLTIISAWLFMHTVFALHYAHDFYMALSRNEENGGLDFPGTEHPTYPDFLYFSYIIGTS AQTADVSITNKHMRLLNLFHAVLSFGFNTTILAICINVAAGFLTN >gi|333032594|gb|GL891832.1| GENE 113 125331 - 126230 233 299 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 280 1 280 305 94 25 4e-18 MELRHLRYFITVAEELNFSKAALKLYTAQPSLSQQIKDLEEDVGVRLLNRTKRKVELTEE GEVFLEHARLTLAQADKAVAMARQVSKAKQQLLRIGFVPIAEMKIFPYVLPNLRLQHPDL TIELSSLNNAEQLKALKRGELDITFTRDNTENDEIQSQFVLTEPLIFLLPRNHPLAKYDR IPVKALHGIDFIIPAAEQSNTLHNTILEFTKTHGIDLNIVQKADSILLNINSIGSGLGCT ILPAYVAPLGVSNTVVRPLDVELPSLDLFVSYRKNTESVGVKRFIDQLNKVFHLDKNLD >gi|333032594|gb|GL891832.1| GENE 114 126965 - 128017 916 350 aa, chain + ## HITS:1 COG:PA3969 KEGG:ns NR:ns ## COG: PA3969 COG2220 # Protein_GI_number: 15599164 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Pseudomonas aeruginosa # 29 331 26 323 361 211 42.0 2e-54 MKDKPTLTYQLPTQSCWTHTWIKPPFCHPELGHENDTRFYNQQPRSPARGSKELLRWLVT RESYTWNVDIQNEYDVRVNTPIALPQNRPHADLDDWQVWFVGHATVLIQIGPYNFITDPV WCDYASPLHGRGPRRVCPAGFALEQLPTIHGVLLSHNHYDHMDLATLEWLHKKFAMPIYT GLGNGFYLPKEFHVIEMDWWQEIPYHELRIVYTPAQHGSGRGLRDQNKALWGGFSVLAKT GHCFFAGDTGYAGHFKQIHTRYGAPRVALLPIGAYEPRKLMSYVHMNPQDAVHAHLDLQA HRSVAIHYRTFQLTDEGREDPEHALAQAIKASSKLANPFYCIREGHKLTV >gi|333032594|gb|GL891832.1| GENE 115 128084 - 130240 2489 718 aa, chain - ## HITS:1 COG:STM4106 KEGG:ns NR:ns ## COG: STM4106 COG0376 # Protein_GI_number: 16767372 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase (peroxidase I) # Organism: Salmonella typhimurium LT2 # 6 717 15 725 726 1050 75.0 0 MSNESKCPFSGHNSKPQVTVGGGTANLHWWPNQLRVDLLNQHSERSNPLGKDFNYRQEFK KLDYYALKADIKNVLTDSQDWWPADWGNYTGLFIRLAWHAAGTYRMGDGRGGAGRGQQRF APLNSWPDNASLDKARRLLWPVKQKYGQKISWADLFILAGNIALESSGFRTFGFGAGRED VWEPDNDVNWGDEKEWLAHRNSEALAGSNLAATEMGLIYVNPEGPQASGDPRSAAPFIRA TFGNMAMDDEEIVALIAGGHTLGKTHGAASADHVQADPEGAPIEQMGFGWANSYGTGVGK DAITSGLEVIWSQTPTQWSNYFFENLFKYEWVQERSPAGAIQWVAADAEAIIPDPFDPSI KRKPTMLTTDLTLRFDPEFEKISRRFLNDPQAFANAFARAWFKLTHRDMGPKARYLGPEV PAEDLIWQDPLPAASATPSSASIADAKAKIVALGLSTGELVSLAWASASTFRGGDKRGGA NGARIALSPQREWEVNKKAVETLTKIEELKASTQLSLADLIVLAGNVGVEQAAQAAGFNI TVPFAPGRVDALQSQTDVESFQLLLGLADGFRNWKKQGVNTPAEVLLIDKAQQLTLTAPE LTALIGGLRVLGTNWDGSQHGVFTQQVGVLSTDFFTNLLDMSNVWAPVDSTSEVFEGKDR KSGTVKFTATRNDLVFGSNSILRALAEVYAQADGKEKFVQDFVAAWTKVMNLDRFDLA >gi|333032594|gb|GL891832.1| GENE 116 130754 - 133048 2394 764 aa, chain - ## HITS:1 COG:PA0337 KEGG:ns NR:ns ## COG: PA0337 COG3605 # Protein_GI_number: 15595534 # Func_class: T Signal transduction mechanisms # Function: Signal transduction protein containing GAF and PtsI domains # Organism: Pseudomonas aeruginosa # 6 756 2 751 759 746 51.0 0 MSNMQLDTLRRIVQEINASVSLHESLDIMVNQVAEAMKVDVCSIYLLDERNQRYVLMASK GLNPESVGHVSLQLGEGLVGLVGQREEIVNLDNAPKHERFLYLPETGEEIYNSFLGVPVM YRRKVMGVLVVQNRLPQDFSEAAESFLVTLCAQLSGVIAHAHAVGNIDVFRKPSNGPAYK TFQGVSGAGGVALGRAIILYPPADLGSVPDREAEDISDELRILDQAISSVRSEIRSLDEK MHDSLMAEERALFSVFLRMLDENALPAEIKELIRDGHWAQGAVRRVIEKHTALFAQMEDD YLRERVSDLKDLGRRILAYLQEEDSSHRELSPDSILIGEEISTAALVELPVDNIAAIVTS EGAANSHMVIVARALGIPTVVGVTELPVNTLDDAEMIVDAYQGRVFVNPPRRLRQRYKEI QKEDEQIAKDLKQYETKEAITPDGVSVQLFVNTGLMIDVVRGVQRGAQGVGLYRSEIPFM LRERFPGEEEQRAIYRQQLSHFANKPVVMRTLDIGADKDLPYFSIEEENSALGWRGIRFT LDHPEIFSAQIRAMLKASIGLNNLHILLPMVTTVSEVEEVLYLLERDWIAVQEEEQVKIT KPKIGIMVEVPSVLLQIDEFAELVDFFSVGSNDLTQYLLAVDRNNPHVANVYSHFHPSIL RALTRLVKECHKYQKPVSICGEMAGDPLSAILLMAMGFNTLSMSSSNILRVRKAICHVPM SDAQKLLDDVMKMNNPLIVKSWLEYYFKTHGLADMVKSNRLVSV >gi|333032594|gb|GL891832.1| GENE 117 133134 - 133619 388 161 aa, chain - ## HITS:1 COG:PA0336 KEGG:ns NR:ns ## COG: PA0336 COG0494 # Protein_GI_number: 15595533 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 1 155 1 155 159 213 65.0 2e-55 MIDSEGFRPNVGIILANDDGQVLWAKRIGHNAWQFPQGGIQFGETPEQALFRELREEIGL LPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPE FDEWQWVSYWYPLGQVVNFKRDVYRKAMVELCTQLPVQQLP >gi|333032594|gb|GL891832.1| GENE 118 133802 - 134452 763 216 aa, chain + ## HITS:1 COG:PA0335 KEGG:ns NR:ns ## COG: PA0335 COG0560 # Protein_GI_number: 15595532 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 1 211 1 213 217 186 44.0 4e-47 MKLALFDLDHTLLNTDSDHSWGEFLVNEGLVDPVHHRQMNDKFYEDYKAGQLDPYAYNEF VFGFLTKHDNNYLTELHQLFMEKVIRPQMRPKGFDAIKKHQDLGHTIVGITATSDFITAP IFREFGITEILATNAEVADGKYTGKVAGLACYQKGKLARLEAWLDGRSVSESWAYSDSIN DRFLLEYATHAIAVNPDDRLEKLAQEHNWEIQDWSI >gi|333032594|gb|GL891832.1| GENE 119 134507 - 135103 384 198 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00422 NR:ns ## KEGG: ACICU_00422 # Name: not_defined # Def: transmembrane protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 198 1 198 198 406 100.0 1e-112 MIVKNQYSKIIKIGLYLFITLAILVLVTFIWFKRIRVIFAHHLSLLHCDGQVCVDDPKTQ PLAKTLYNQALKETQNKVGAFHQQPTMVFCSTPQCANTFGMEKAAAKAIGNLGLLVAPRG WKDFYITHELIHHRQAEEWGNIAMLTKPKWLVEGMAYSLSDDPRPTLSVPFQQWRAQFKL WHQQNPDSNIWLTTEKIK >gi|333032594|gb|GL891832.1| GENE 120 135199 - 135435 241 78 aa, chain + ## HITS:1 COG:no KEGG:AOLE_17365 NR:ns ## KEGG: AOLE_17365 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 77 1 77 78 107 88.0 1e-22 MTKNKRTKSKGSNGFFQEFIDQLITAIFGELLIYIIALLFMSALGGIIFAAICFSWGVLF LLLPFAALIYILVKKYSH >gi|333032594|gb|GL891832.1| GENE 121 135441 - 136301 802 286 aa, chain - ## HITS:1 COG:PA3122 KEGG:ns NR:ns ## COG: PA3122 COG0583 # Protein_GI_number: 15598318 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 286 1 287 297 250 44.0 2e-66 MNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHA AHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQV TLDVHFVDSEQAHEQVLAGDLELAFLTLPPSGDERLNYITIWNDPLVFVAAPFHPLAQKK NLTLQDLIEYPSLLPAAQTYTAQITLAEFEKQGLKPKITMSNNPLESIRMLVSIGLGWSV LPKTLLNQDMQQLDLNVEMNRQLGMVWHPARTQSRAMQELIKMMQE >gi|333032594|gb|GL891832.1| GENE 122 136419 - 136667 351 82 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00424 NR:ns ## KEGG: ACICU_00424 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 82 1 82 82 139 100.0 5e-32 MANIQKFVVNNQRTLKKTLSYYIMHITVAMLVAYFVTGNIWMALTLSMLEPTVQAFAFFF HEKVWAAKDRRISALSENETTA >gi|333032594|gb|GL891832.1| GENE 123 136911 - 138329 1911 472 aa, chain + ## HITS:1 COG:PA3121 KEGG:ns NR:ns ## COG: PA3121 COG0065 # Protein_GI_number: 15598317 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Pseudomonas aeruginosa # 1 472 1 472 474 729 75.0 0 MAGKTLYDKLWDDHVVTQRDDGSCLLYIDRHLLHEVTSPQAFEGLQLAGRQPWRLSANVA TPDHNVPTSKKERDQGIAGIEDDTSRIQVQTLDDNCKAFNIVEFGINDIRQGIVHVVGPE QGLTLPGMTVVCGDSHTATHGAFGCLAHGIGTSEVEHVLATQCLVQKKSKNMLVRVDGVL GKGVTPKDVVLAIIGKIGTAGGTGYAIEFGGQVFRDMSIEGRMTVCNMAIEAGARVGMVA VDDKTIEYVKGRSYAPKGEQWEQAVAYWNTLHSDVDAVFDAVVELNGAEIEPQVSWGTSP EMVIPVSKAVPTLEQAKDDVQRNDWTRAYQYMGLNAGQALADIQLDRVFIGSCTNSRIED IRAAAEVVKGRKVAPSIKQAMIVPGSGLVKQQAEKEGLDKIFLEAGFEWREPGCSMCLAM NADKLQPGEHCASTSNRNFEGRQGNGGRTHLVSPAMAAAAAIAGHFVDVRSF >gi|333032594|gb|GL891832.1| GENE 124 138348 - 138995 773 215 aa, chain + ## HITS:1 COG:PA3120 KEGG:ns NR:ns ## COG: PA3120 COG0066 # Protein_GI_number: 15598316 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Pseudomonas aeruginosa # 1 212 1 212 212 345 77.0 3e-95 MKAYTVEQGIVAPLDRANVDTDLIIPKQFLKSIKRTGFGDNLFDELRYLDEGYPGQDNSV RPKNPDFVLNQPRYQGATVLIARTNFGCGSSREHAPWALNEYGFRTVIAPSFADIFFNNC FKNGMLPVILPEDIVDQLFKECAAQEGYQLTIDLAAQEVRTPTGEAFKFEVDPFRKHCLL NGLDDIGLTLQNADAIRAYEEKTKQVRPWVFQEIN >gi|333032594|gb|GL891832.1| GENE 125 139108 - 139698 372 196 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003117 NR:ns ## KEGG: ABBFA_003117 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 196 1 196 196 388 100.0 1e-107 MKRNVTHSFLLSLCAITLSACQSTYNVVDTVRIKQAEQENLGQNAAIYCSGAKSCEFERL NDITVVDAQTRRISNQAIHQGIVRLNGSVLSQSNSLYLSVPAKQYEVVIRYYPISPDRAE TIHVIHQFKANHRYMFKMYRDKSNRSGSLLNVSVPDPLCVDLEQDGRVIRRFCRPFDVTT GLGEFLEQKKLTPRQS >gi|333032594|gb|GL891832.1| GENE 126 139730 - 140809 1435 359 aa, chain + ## HITS:1 COG:PA3118 KEGG:ns NR:ns ## COG: PA3118 COG0473 # Protein_GI_number: 15598314 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Pseudomonas aeruginosa # 1 358 1 357 360 508 72.0 1e-144 MSKQILILAGDGIGPEIVGAAEKVLNKVNEKFNLSLTWEHGLLGGAAIDAHGEPYPAVTS EQAKKADAILLGAVGGPKWDTIERSIRPERGLLKIRSELNLFANLRPAILYPQLADASSL KPEIVAGLDILIVRELTGGIYFGQPRGIRELENGEKQGYNTDVYSESEIKRIAKVAFELA GLRGGKVCSVDKANVLEVTELWKQTVTDLQQANYPNIQLSHMYVDNAAMQLVRAPKQFDV IVTGNLFGDILSDEAAMLTGSIGMLPSASLDENGKGMYEPCHGSAPDIAGQNVANPLATI LSVAMMLRYTFREEAAAKAIEDAVGQVLDQGLRTADIMSEGMTKVGTAEMGEAVVAALA >gi|333032594|gb|GL891832.1| GENE 127 140863 - 141270 201 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00429 NR:ns ## KEGG: ACICU_00429 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 135 1 135 135 255 100.0 4e-67 MNISTLCQMSLLSFMLLNINGCASHPRQSIDLQEYLKNFIGKSSTTIQQDLNLRSLGFQV ARTPQKTSDQLIYTILRPLSIPIPMVSNVDMRGGSVPIQSGNLSGNSYDLNFNCKVIFKL KNDIAESIQYEGKAC >gi|333032594|gb|GL891832.1| GENE 128 141439 - 141807 227 122 aa, chain + ## HITS:1 COG:PA3021 KEGG:ns NR:ns ## COG: PA3021 COG3755 # Protein_GI_number: 15598217 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 21 120 27 128 128 82 41.0 2e-16 MKKIVFAFLCFGITTVYADNCDSARNTYDDIYCTNKIYASADADLNKNYQALRAKLNTAQ RNTLKKSQLAWIRQRDAECTDSNRNSVDVQCRLQTTQERNHWLQERLRECQTVGCKTSRL SE >gi|333032594|gb|GL891832.1| GENE 129 141859 - 142080 253 73 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15610598|ref|NP_217979.1| translation initiation factor IF-1 [Mycobacterium tuberculosis H37Rv] # 1 71 1 71 73 102 67 2e-20 MANKEELIEFEGVVTETLPNTMFRVRLENGHEVIAHISGKMRKHYIRILTGDSVKVEMTP YDLTKGRITYRAR >gi|333032594|gb|GL891832.1| GENE 130 142330 - 143355 1196 341 aa, chain + ## HITS:1 COG:PA4787 KEGG:ns NR:ns ## COG: PA4787 COG2207 # Protein_GI_number: 15599981 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 9 340 4 330 333 282 46.0 5e-76 MEGHCVGQLTDASVVLRFGYQAIRRAGLPTEEILTKAGVALNQVDTNARTPLSAQYAFWT AAQEVSKDPDIGLHLGEHLPLYRGQVIEHLFISSETFGEGLKRALAYQRLISDAFDAKLV VEDGRCYLTNGEQVGADNLVNRHFSECAISGVLRFFKFITEGQFHPIFIDFNFSEGASED EYFRVYGCPVSLGQKETRLYFDPAILDFQLWQAEPELLQLHEQLAIEKLQELARYDLVGE VRRAIGSTLESGETTLETVAAQLNITPRRLRTQLSEANTSFQQILSDYRCRLAKKLLANT NESVERIVYLTGFSEPSTFYRAFKRWTNETPVEYRKRKQHR >gi|333032594|gb|GL891832.1| GENE 131 143375 - 144172 798 265 aa, chain - ## HITS:1 COG:PA3114 KEGG:ns NR:ns ## COG: PA3114 COG0101 # Protein_GI_number: 15598310 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Pseudomonas aeruginosa # 1 265 17 282 285 286 51.0 2e-77 MQRYAVGIEFSGIQYRGWQTQQPGVASVQETIELVLSKIADEPITLHGAGRTDAGVHATN MVAHFDTNAIRPERGWIMGANSQLPKDISIQWIKQMDEEFHARFKATARRYRYVVYNAPH RPALLHKQVTHIYQKLDVQKMIKAASKFEGTHNFETFRAAACQSNQPVRHVKHCRLFEHG RYLVLDIQADGFLHHMVRNIMGCLLEIGQGMYEIDHIDAMFAAEDRKAAGITAPPDGLYF IQCYYPEQFDLPQPPLGPHWLNLPE >gi|333032594|gb|GL891832.1| GENE 132 144187 - 145134 976 315 aa, chain - ## HITS:1 COG:YPO2161 KEGG:ns NR:ns ## COG: YPO2161 COG0252 # Protein_GI_number: 16122393 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Yersinia pestis # 20 264 37 279 338 84 28.0 2e-16 MGGTFGCIGEPLAPMPYDQFLPQLEKVIPPHLTVHCFAAPNIVDSSACTAPDWLRLIQRI QQLQLEGYQHFVVIHGTDTLSYAAATLARFLGQSCHIVITGSQYPLLNIQGDNTREFTDA IENLYLALEQVIALPVGAYLAFHHQVFHAQTALKTHTTELDAFSGLSSNVEFTPQQNELI VQDAQIEKAASFQILNWMMQPIATQHLVQQLRHLLPAPPHFLVLQGFGTGNIAVNDEFLA TLDELYTRGCVPILATQVTFGGMDQRYAISAWAKTAKIVINDAHSHADLYAKALQIYLKY PTPEQWLNHWNENLH >gi|333032594|gb|GL891832.1| GENE 133 145217 - 146479 1251 420 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00435 NR:ns ## KEGG: ACICU_00435 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 420 1 420 420 596 100.0 1e-169 MLYVIPFIILLVVAVILKKRENSQKQEATSPKNINRKSGKKASAKSSKSSREKTKAKVIE ENTPAIPQSNPVPEALRHNIQQLIQEKQFSAAEAQVNQALKKDNTQHELYLLLLEIHIAQ KDEFAIQQLISHIRSLGLNEIAAQAETRQKEYESSRQPDAIDFPQAQTYEEPKNTDTTAQ FDELTTSSSEASFDDLQKDYTPVKQEPAVEIEPLEFNFSFEQTSATENTNQPAQQPELSS TQETNELADLEFSFDLAPLHGTEEKSQPVELKADQENSINALDFNFDLNPSSSETKSVEQ APSLDEIKLVEQTPLEAASIAPLEFSLDEPALVPAPELETQSHIDVVNEAATQTQIEDPL LEAFPELKQINENELDLKLAEQYIKFGANQAACNLLQGDEQKFNTEQQQHAKNLLNRIAS >gi|333032594|gb|GL891832.1| GENE 134 146539 - 147903 1043 454 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00436 NR:ns ## KEGG: ACICU_00436 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 454 1 454 454 654 100.0 0 MTAYNKLKIAIFTIMSSPSIYAITLDPIQIQSAPGELLYAEMNFQQADPNTPLQVSLATQ DDLNGLGVTHQPPGNLNFYTRQNGQGSGVIVITSSRPIIDPELNIVVKVSEGNATRLQHI KTVLKPSPIKKAAMNESPLSPQFIVNEKDIALNLPESTQYTSTENTSTVAETTSNEHNLN ISTGTAPALNSSSPAPVAPFTEKPSTQTLQPTIATMNTESSAVEKQPSTSLKSSDGNQTT TVKKAAQSKTAQQKNVLSKNTPKKQKISAYKGPAPTGKYVVQRNESLWSIANRIAAQTKQ PVAKIMRDIQAQNRHAFIQGDVNRLRQGSSLNLTTNTTKASHLKPKSSEAHLAKPSSGRA KYRLQQAEMSIVAENSPNSAHGSAKKSTQQSQNNTELAVKVMTTRKKTVTLQRNVTKLNQ TLSLKDQRIQLLNARLAELQQQLQAQQQTHKQKH >gi|333032594|gb|GL891832.1| GENE 135 147863 - 147967 62 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVKMAIFNLLYAVISIHDLISRKVVQNYTIMKCK >gi|333032594|gb|GL891832.1| GENE 136 148052 - 149170 1475 372 aa, chain - ## HITS:1 COG:NMA0351 KEGG:ns NR:ns ## COG: NMA0351 COG0136 # Protein_GI_number: 15793362 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Neisseria meningitidis Z2491 # 1 367 1 368 371 522 68.0 1e-148 MKVGLVGWRGMVGSVLMQRMVEENDFAHIEPFYFSTSNAGGEAPSFGGKTAPALMEATDI TSLKQMDVIITCQGGDYTSEVFPKLKATGWDGYWIDAASTLRMTDDAIIVLDPVNLNVIK DGLAKGTKTFVGGNCTVSLMLMGVGALFQNNLVEWMTAMTYQAASGAGAQNMRELLTGMG YLYNNTKTLLDDPKSAILDIDRQVAELQRGEGFPSANFGVPLAGSLIPYIDKQLESGQSK EEWKGQVETNKILGNSQIVPIDGHCVRIGAMRCHSQALTIKLKKDVPLDEIEDMIRNSNQ WAKVVPNTREASMTDLTPVAVTGTLTVPVGRLRKLNMGKEYLGAFTVGDQLLWGAAEPLR RMLRILVEYKSS >gi|333032594|gb|GL891832.1| GENE 137 149360 - 150481 939 373 aa, chain + ## HITS:1 COG:PM1075 KEGG:ns NR:ns ## COG: PM1075 COG3021 # Protein_GI_number: 15602940 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 19 363 26 364 365 299 47.0 7e-81 MIYIEVLAVVVIWLSFWSLIPRDEWWFRGADFPRLQILFIGLIALIGMLFWPTEWDVWRE LLLAVLIAAIAYQLKMVLPYTLFWKKQVKKVKQHQLDPTKQISLIVSNVLTPNDKYHLLL EHVRTLKPDLLLTLESDTTWENALKEIEKDYPYRVPVPLDNLYGMHLYSRLPLKNTEVKF ILSNEIPSIHTTVILRSGMPVQLYCLHPKPPSPTEAKDSTLRDAELLIVGDQIKDLDESC IVMGDLNDVAWSRTTRLFQRISGLLDPRVGRHFINTFHADYPLLRWSLDHIFHSTDFGLV KMQRLSHIGSDHFPVYVVLQTGRIFEEIHEELEQTQADEEEAQAAIQEGIAKAEKEEKIV TDEIAQPYKEKNI >gi|333032594|gb|GL891832.1| GENE 138 151171 - 152457 1276 428 aa, chain + ## HITS:1 COG:YPO0254 KEGG:ns NR:ns ## COG: YPO0254 COG1301 # Protein_GI_number: 16120591 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Yersinia pestis # 1 427 1 427 438 555 75.0 1e-158 MKNFKFSLAWQILIALILGIVVGAVLHNQPEIKDSIVNNVLTPLGKIFISLIKMIVIPIV FSTLILGIAGVGSTKSLGRLGFKTILYFEIITTIAILVGLFAANIFHPGSGIDMSQLVQT DISQYKHTTEEVQSQSHGIIQTILSLIPTNIISSMAHGEMLPVIFFAVLFGIGLSSLPAT TKDPLLNVFHAVSETMFRVTHIIMKYAPVGVFGLIAVTVANFGFASLIPLGKLVVLVYGA ILFFALVVLGITAKMFSINIFTLFKILKDELILAYSTASSETVLPRIMQKMEAYGAPKAI SSFVIPTGYSFNLDGSTLYQSIAAIFIAQLYGIEMTISQQVILVVTLMITSKGIAGVPGV SFVVLLATLGSVGIPVEGLAFIAGVDRIMDMARTALNVVGNALAVLVISKWEKQYDYEKA AAYEASLK >gi|333032594|gb|GL891832.1| GENE 139 152514 - 153614 1054 366 aa, chain - ## HITS:1 COG:XF0102 KEGG:ns NR:ns ## COG: XF0102 COG0438 # Protein_GI_number: 15836707 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Xylella fastidiosa 9a5c # 1 364 9 374 376 250 41.0 3e-66 MKVMQLLPELNSGGVERGTLEIARALVAQGHQSLVVSNGGRLVSQLEAEGSTHLTLPIHK KSLSSLWQIRPLRQLIEEHQPDIVHVRSRVPAWLTHFALRKIPANKRPHLISTVHGFYSV NRYSAIMTQAEKVIAVSDSVVKYITDHYKNCPPQDIVRIYRGIDPAAFPHNYQPSAQWFN QVFNDFPELENKFLLCLPGRITRLKGHESLIELMQKLGEQYPQLHAVVVGGADVKKQAYL SELQNTIQSKGLADKITFVGHRSDIREWLAFSDIVLSLSNQAETFGRTALEALSVGTPVI GWNRGGVAEILSHVYPQGLVEAENEKALVETVKNHIEQPQTVAPVTMFSLKDMCDQTLEL YQSVLK >gi|333032594|gb|GL891832.1| GENE 140 153880 - 154815 1029 311 aa, chain - ## HITS:1 COG:PA3242 KEGG:ns NR:ns ## COG: PA3242 COG1560 # Protein_GI_number: 15598438 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Pseudomonas aeruginosa # 12 311 6 306 312 213 38.0 3e-55 MSQKQPYTPGEFQWSFLLPKYWGVWIAITFLMLLAILPWAIQWRLAHGLANLAWKYLKSR RKTTIRNLEVCFPEWTPEKVQQQAKQVFVDMMLGIFETLNAWYKPYWFKNRVTIEGLEHI TNAQAQGKGVLLLGTHSTLLDAGGYVCAQYFEPDVVYRPQNNPLLDMLIYRCRGTIYKAQ IDHDDMRGLIRHLKEGDAIWYSPDQDFGLKQGIMAPFFGVPAATVTAHRRLLKISKAVAV PLYFYRHGDVQDPKYHILIEPAVDNMPSEDEVDDATRVNKIIENQLRIAPTQYMWFHRRF KTRPEGYEEIY >gi|333032594|gb|GL891832.1| GENE 141 154935 - 155567 802 210 aa, chain - ## HITS:1 COG:mll8240 KEGG:ns NR:ns ## COG: mll8240 COG1280 # Protein_GI_number: 13476807 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Mesorhizobium loti # 1 210 1 210 210 231 60.0 8e-61 MLDLSQILAFGFICLAMVLTPGPNMIYLISRSISQGKIAGFISLGGVAVGFVFYMLCASF GITALVVAVPYAYDTIRIAGAMYLLWLAWKALRPNAAPIFNIKDLAVDSPLKLFLMGFLT NLLNPKIAIMYLSLLPQFIHPQQGSILAQSIQLGTIQIFVSVSVNALIVFSAGSIALFLQ KKPLWASIQRWVMGTVLAGLAVRILLEHRR >gi|333032594|gb|GL891832.1| GENE 142 155713 - 157623 2386 636 aa, chain - ## HITS:1 COG:YPO1419 KEGG:ns NR:ns ## COG: YPO1419 COG0488 # Protein_GI_number: 16121699 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Yersinia pestis # 1 635 1 637 637 575 50.0 1e-163 MAYITLRDVQLAFGGPALLDGANFNLERGERVCLIGRNGEGKSTLLKLIEGSLLPDSGEV SVQNGLTVSMLAQDVPMSSGKVADIVAEGAGEAAAVLKAYHEASDACVLGDMEACDRMGS LQHKLDQLDGWALENKVNTILGKMELDPNADLADLSGGRKRRVLLARALLTQPDVLLLDE PTNHLDVESIEWLEKFLLDQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGNYSRY LDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKALREESKARRFQ QSKVNMGVQEAQRSGKLVFDIEHLSVSYDGQTLIRDFSAIVMRGDRIGLVGDNGVGKTTL IKAILGEVQHEGVVKTGTQLEIAYFDQLRNQLDLEKSVSENVSEGSDFVDVNGQRRHILS YLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLELLEEM LSEYKGTLLLISHDRAFMDNVVTSTWVFDGKGGIAEYIGGYQDYLIQRPNERVVDQKGDV KKAQAKAEAEKNAAQTNVKKVKLSYKDQRELEQLPAEIEKLENEQAELSDKLADGSWFVT DADAATKASQRLAEIEELLLEKLERWDELEQMGKGN >gi|333032594|gb|GL891832.1| GENE 143 157656 - 157901 225 81 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003100 NR:ns ## KEGG: ABBFA_003100 # Name: not_defined # Def: SlyX family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 81 1 81 81 135 100.0 4e-31 MTKPPYHDDQASFSAPIEDLQVRIAFLDDLVEELNQQLAIQTLEIADLKKQMQLLYQRVE SADLSEGVAPFDPLTNKPPHY >gi|333032594|gb|GL891832.1| GENE 144 157949 - 158959 1275 336 aa, chain - ## HITS:1 COG:mlr7750 KEGG:ns NR:ns ## COG: mlr7750 COG0604 # Protein_GI_number: 13476432 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Mesorhizobium loti # 1 336 27 363 363 405 60.0 1e-113 MKAVAYQKAGPITSPEALVDIEIDTPVAKGHDLLVRVQAVSVNPVDTKIRKNVSAEQSGW KVLGWDAVGTVEAIGDKVTQFKIGDVVWYAGALNRQGSNSELQLVDERIVGHKPKTLEVT EAAALPLTAITAWEMLFDRLQVPKTAPTNTTILVIGGAGGVGSITIQLLKQLTNLTIIAT ASRPETKEWVEQLGADYVLDHRQPLAAQIKQLGLSAPLYVFSTTETDQHLSDIVELIAPQ GHFGLIDDPDQLDIKPFKSKSVSVHWEFMFTRSMFQTEDMEKQSELLNEVSKLVDEGKIK TTVTQVLSPINAENLTRVHEQIESGSTKGKIVLHGF >gi|333032594|gb|GL891832.1| GENE 145 159059 - 159436 236 125 aa, chain + ## HITS:1 COG:mll7749 KEGG:ns NR:ns ## COG: mll7749 COG1733 # Protein_GI_number: 13476431 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 110 1 109 120 160 65.0 6e-40 MAKARHSSFDCSPGCSVEAAISLIDGKWKCVILWHLLNEGTLRFNEIRKRVPSITQRMLT NQLRELEQDGIIHREVYPQVPPKVEYCLTDLGRGLEQILLALKTWGDAHLDQFGKLTTLE TEKSA >gi|333032594|gb|GL891832.1| GENE 146 159584 - 160033 400 149 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003097 NR:ns ## KEGG: ABBFA_003097 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 149 1 149 149 290 100.0 1e-77 MDNIGIWVTVIIVLFVLGSIFGLRVSPREKALGIMRDKARKMGLHPRVIAAPEWTHVPMA TEKRASMVAYYSVLIPDARLPLMRARVIDGKLKVVQGDEKFNDSPIALKGIYAIDMQANC VGLYWDEESDLKATQLDEMKAYLLALAEA >gi|333032594|gb|GL891832.1| GENE 147 160069 - 162705 2563 878 aa, chain + ## HITS:1 COG:PA3011_1 KEGG:ns NR:ns ## COG: PA3011_1 COG0550 # Protein_GI_number: 15598207 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Pseudomonas aeruginosa # 22 607 3 595 596 816 70.0 0 MANTSRSASQSTASSASAAHKRALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGG SKATEKKPAARTKLTEAEKEQKANQALINRMGVDPEHGWQAHYEVLPGKENVVAELKKLA KDADAIYLATDLDREGEAIAWHLREVIGGDDSRYHRVVFNEITKNAIQEAFKQPTRLDLN RVNAQQARRFLDRVVGFMVSPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW QVFADTKAKKDDIRLEAVKQAGKTLKLKNKAETDALLDVLKGAEYKVAQREDKPTKVNPS APYITSTLQQAASTRLGFSVKKTMMLAQRLYEAGFITYMRTDSTFLSDDAVSMVRAHIES QYGEKYLPAKPNRYGNKAGAQEAHEAIRPSNVALTGDQLAGVERDAQRLYDLIWRQFVAC QMTPAEYLSSTLTVEAGNVELKAKGRTLVFDGFTKVRGANKSDDDIILPAIKVGEILKLE KLDPSQHFTKPPARFTEASLVKELEKRGIGRPSTYAAIISTIQERGYVKLENRRLFAEKM GEIVTDRLDESFNNLMNYAFTADLEGQLDRVATGERNWKELLDTFYGDFKKRLTNAQGEQ GMRRNQPVEVPAVHCPECSRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLTPVESLAA LSDDDSAETADLMSKHRCPKCGTAMDSYVIDGGRKLHVCGNNPDCDGYELEEGEFKIKGY DGPTIPCDKCDGEMQLKTGRFGPYFACTSCDNTRKVLKNGQPAPPRVEPIKMEHLRSTKH DDYFVLRDGAAGLFLAASKFPKIRETRAPKVAELRSVADQLDPKYQFILQAPDVDPEGNP TIVKFSRKNQSQYVGSETPEGKQTKWSLIYQDGKWIEG >gi|333032594|gb|GL891832.1| GENE 148 162722 - 162826 57 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAQLAFFTSTTIKENFNFYGEKECGKTFGFYVY >gi|333032594|gb|GL891832.1| GENE 149 162793 - 163551 758 252 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00449 NR:ns ## KEGG: ACICU_00449 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 252 1 252 252 455 100.0 1e-126 MWKNIRILCLLIVLLIVAVQAWRDQNQDWNQPIVVVLHPINADGLQTTQTYIHQLQNTDF QALKSYLSEWSQHYRGQSANFEIRLGQQLQQRPPEVPQNAGIFHVVWWSLKFRFYAWRQQ QPEDNGASLKLYLNYYDPNYQKVLVHSTALEKGRIGSVNLFATRGQASQNQVVIVHELLH GFGAKDKYDLKTGQPIYPLGYAQPEKVPLYPQKRAEIMGGRTPLSEQTSKMPSDLQETVI GLPTAQEVGWLK >gi|333032594|gb|GL891832.1| GENE 150 163689 - 164261 636 190 aa, chain + ## HITS:1 COG:mll8244 KEGG:ns NR:ns ## COG: mll8244 COG3247 # Protein_GI_number: 13476811 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 3 180 2 183 184 103 37.0 2e-22 MKTVGNDLVRNQLHADRKWYLILGFVLIIFGLVLFSSLPFATFSVVFLFGILMMVGGVLH LIAALSVFKGGSRWLWALFGVLYLMAGYYAFSTPVTTAVVLTSLLSIALIIAGVIRTINA FLLRPIAGWGWTLFSGLLTLATGILILVSKDSPFWVLGMFLAVDILFQGINFLGLASAIK HLPSSSKTVS >gi|333032594|gb|GL891832.1| GENE 151 164378 - 166357 2034 659 aa, chain + ## HITS:1 COG:TM1238 KEGG:ns NR:ns ## COG: TM1238 COG0210 # Protein_GI_number: 15643994 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Thermotoga maritima # 6 628 15 643 648 318 33.0 2e-86 MSLAKLINELNAQQKKAATTMAQNCLVLAGAGCGKTKTIVARAAYLIDQGLPANQIQILT FTRRAASEIVARVEQHVGAQAKGLRASTFHTFCMYLLRRNPQAFGLTQFSIIDRDDQLLM FRLLRGKDKDNVLPKAAELCDLYSYARNTQSKLSEALLKQLPEAYEYKSQIAELMKTYEQ RKRERNFLDYDDILSIVAVHLQNSEALTNWVAGFCQALLVDEMQDTNPLQWALLQPLIGK VKLFCVGDDAQSIYGFRGADFENIHSFKERIPDAVIHTLDLNYRSTQEILDLSNWLLAHS PIDYQKQLQAHRGKGQKPQLHLFGNEFEEANWIAQDLIERHQQGANWYDHMVLVRSGYSA RYLEGAFIAAEIPYRFIGGVKLLESAHVKDVLSLLRIVSNPQDDLAWMRFLTLWDGIGDV GASKLAQELMSISEVEERCERLERHGKVPLQAILILKQLDVLQQHVEASIGLALDALSEQ LEQNYKTKDWSRRARDFDLVKQLARKHASLGEFLEEYVLEPISISEIEKAGDDDLVTLIT IHSAKGAEQKVCYVPHVSPNQYPYARAQGDFDEVEEERRVLYVALTRAENELILTKQNLN TWSQDTYDEQGRKIESYFLNDLPAHLVQAKIHRQVPQPFAKKQWNTSRTVNLGFGIDLD >gi|333032594|gb|GL891832.1| GENE 152 166410 - 166670 411 86 aa, chain + ## HITS:1 COG:TP0356 KEGG:ns NR:ns ## COG: TP0356 COG0724 # Protein_GI_number: 15639347 # Func_class: R General function prediction only # Function: RNA-binding proteins (RRM domain) # Organism: Treponema pallidum # 9 86 20 97 105 59 46.0 2e-09 MVNEGWKMKILVRNLDRSVTEAEVLELFKAYGKVESCVVVTDKDTGKSKGFGFVEMPNPR EAIKAIKGLNTLKVKGYGIRVKAAEE >gi|333032594|gb|GL891832.1| GENE 153 166678 - 166845 154 55 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00453 NR:ns ## KEGG: ACICU_00453 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 55 1 55 55 105 100.0 6e-22 MQQFLALSVVAPNGTRIAQRIKTLEVRSWVPAQLPLKDLFIVENQNFLKNDGDEG >gi|333032594|gb|GL891832.1| GENE 154 166932 - 167465 701 177 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003090 NR:ns ## KEGG: ABBFA_003090 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 177 1 177 177 300 100.0 2e-80 MAILEQESLVMSRVARYHADRTNQKLYFARLACQQAEQTDHVQQVQAYREAAVFHLHGAM LAFLQELVRYYRLNDLQPTLKSIEEHMAAKGQVSPEVSVLQQLAKDGFVAELKRAYRMCQ YAPEPTEPTPEEETSSNLIIKVTQGPQSWLPDVKILREWHRELSHLIDGFRNEMVEF >gi|333032594|gb|GL891832.1| GENE 155 167527 - 167856 332 109 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003089 NR:ns ## KEGG: ABBFA_003089 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 18 109 1 92 92 145 100.0 4e-34 MQSARVLCHHVETWRKYMSIQQLKELFGNQEAVLELVQLEGGELALRNAGSEKEPLVKIQ FSDELKAILGEQTPIVAQHMIQAALFGLLEKQVNEWQAEVVDEQPKFLS >gi|333032594|gb|GL891832.1| GENE 156 167894 - 169603 471 569 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229845962|ref|ZP_04466074.1| 30S ribosomal protein S2 [Haemophilus influenzae 7P49H1] # 2 521 7 504 618 186 26 1e-45 MPHDVDLIILLAVGFGVALFFGYIAARLRLPPLIGYLIAGIIISPNTPGVEADIHLANQL AELGVMFLMFGVGMHFSLNDLLLVRRIALPGAILQIAVATLLGIGVSMLWGWSFGSALVF GLSLSCASTVVLLKALGDRGLLDSVNGKIAVGWLLVEDLVMVLVLVLLPATAVLLGGKAP AGAEGNIWLTLGITLLKVIGFIAFMLIVGKRVVPIIMQFVARLGSRELFTLTVVAAAVSI AYGSYAIFGVSMALGAFFAGMVVKESDFSHRAEEETLPLREIFSILFFVSVGMLFDPHIL IERPLHILAVIAIIMVGKTLAAMALVLFFRYPINTALTVGASLAQIGEFSFILATLGVSL GLLTLEAQNLILAGALFSITLNSFIFSAIEPVQRWIRERSHLARLLERSGDPLAMLPDEV DQSYLRDQVVIVGYGGVGRRITENLINQNIKVVIAEENREIVEKLRQANIAAVSGVATEP GVLIQAHIMHARLLVISPMDILDIHRIVDIAKQLNPQIQVLICAESKEEAAVIRDEHIGE VFYAKEEMAKNMSHHILNQIELAHQSTHH >gi|333032594|gb|GL891832.1| GENE 157 169751 - 169906 262 51 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50083740|ref|YP_045250.1| 50S ribosomal protein L33 [Acinetobacter sp. ADP1] # 1 51 1 51 51 105 100 2e-21 MRDKIRLVSSAGTGYFYTTTKNKRTMPEKMEIKKFDPKIRQHVIFKEAKIK >gi|333032594|gb|GL891832.1| GENE 158 169919 - 170155 407 78 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50083741|ref|YP_045251.1| 50S ribosomal protein L28 [Acinetobacter sp. ADP1] # 1 78 1 78 78 161 100 3e-38 MSKVCQVTGKRPVVGNNVSHANNKTKRRFEPNLHHHRFWLESEKRFVRLRLTTKGMRIID KLGIEKVVADLRAQGQKI >gi|333032594|gb|GL891832.1| GENE 159 170323 - 171771 1437 482 aa, chain - ## HITS:1 COG:PA0366 KEGG:ns NR:ns ## COG: PA0366 COG1012 # Protein_GI_number: 15595563 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 12 482 10 476 476 469 46.0 1e-132 MNSQTKTNPETQVPYDVKHLHDLLEQQKIAYLRHPVPTAKERIDRLARLKRVLVKYQDQI AEAINLDYGNRAIMETKIGELLTCLEQIKYYSKNVTGWMKPSKRHISVLHQPAKGWVQYQ PMGVIGIITPWNYPLLLSVGPLICALAAGNHAMIKISSASPNFGQVLENALSEAFPQELV AVVNGGGVISDAFSHLPFDKMIFTGSTSVGKTVMAAAAQNLVPVILELGGKSPALVHASV DMKDVAQRIAVGKLWNAGQTCVAPDHIFLPRGKTAEFIENFKLIVAGMYPHFRNNQDYTS IINDKQYNRIQGYLENARDQGARIIEINPQNEILDDVRKIAPTLVTGVTTAMDIMQNEIF GPVLPILEYDQIEEVIEFINSRPRPLAMYYFDYDQARADYISQHTHSGHFGINMVITHVA QDDLPFGGIGASGMGKYHGPEGFFGLSHERSVMSNPKLYSLKYILPPFNKPIHRFISKTL LR >gi|333032594|gb|GL891832.1| GENE 160 171884 - 172576 476 230 aa, chain + ## HITS:1 COG:PA0367 KEGG:ns NR:ns ## COG: PA0367 COG1309 # Protein_GI_number: 15595564 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 7 215 5 211 215 181 42.0 1e-45 MSLPKALKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKHEIIKELM HQYQVETLEMLSLPEDRPLTTNDKINYFQVLSGQLWNYRFIHRDVYHLVESNEDFKKIYP RFAGQVMQQGQRIYQAFVDAGLMKMTPSEIEALIINLWIVLTNWTNFLYMSGHISDNNHL EEKWVWQALRQMVFLEGPYLMGESRATYEQLLESLGPSDLFASLSSLKDE >gi|333032594|gb|GL891832.1| GENE 161 172651 - 173514 950 287 aa, chain + ## HITS:1 COG:BS_ykkE KEGG:ns NR:ns ## COG: BS_ykkE COG0788 # Protein_GI_number: 16078376 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate hydrolase # Organism: Bacillus subtilis # 7 287 18 299 300 318 55.0 5e-87 MNMTTANTARLLITCEDKPGIVQAVSSFLYHQGANITALDQYATEAQGGRYFMRVEFELD HLQSRKDALIQTFAANVAERYGMQWRLAFVNDIKKVGILVSKVDHALLELLWRHARGSLP CEITHVISNHEDLREAVENFGIPFTVIKVTKDNKAEAYAQIHEMMQGNDLLVLARYMQIL SEDFVSKWEMKIINIHHSFLPAFVGANPYKQAYEKGVKLIGATAHYVTADLDQGPIIEQD VERVSHDYNVEQLRELGEDVERNVLARAVKWHLEDRIIVDGNKTVVF >gi|333032594|gb|GL891832.1| GENE 162 173906 - 174661 797 251 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003082 NR:ns ## KEGG: ABBFA_003082 # Name: not_defined # Def: protein TonB # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 251 1 251 251 288 100.0 2e-76 MSQSSAALNSPNPMKKKVITALIAVAIGHIGVLWAVSHIKPAELKPIEKKPLQVRFVKIQ EQPKPLPPKPKEPPKKPEPKKEVKEVKVVEKPVTPPKKVEKIQQVKKAETPKETVKTEPK VEPKIVTPTTTVTEKVVEKPKPVVQEAPKAQPAPDPSPKRVSIGGSGVQWSRSPRLTVSP KDLQGEARSVVVLIEADEKGKITNVRVTRSSGIPSLDDKVVRAVRSAKFKPYMENGVAYP IKAEQPFDLTP >gi|333032594|gb|GL891832.1| GENE 163 174706 - 175326 783 206 aa, chain + ## HITS:1 COG:NMA1984 KEGG:ns NR:ns ## COG: NMA1984 COG0811 # Protein_GI_number: 15794866 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Neisseria meningitidis Z2491 # 1 188 1 220 220 120 36.0 2e-27 MNFSIYWQHADAVSKTLYFILLAMSIATWTVFILRLMGTRQLKQQAYAQLSQAITSLKAK LQPLSFEQRKAVAEQALLRQISAEKANADKGISVLGTIASIAPFVGLFGTVWGIFHALVA VGKSGQAGLAQVATPVGEALIMTGLGLAVAIPAVLAYNICVRANRGLAHDLQDQAHSLLI DTMLQQDSTVKSDVKTAQQSYVGGQA >gi|333032594|gb|GL891832.1| GENE 164 175326 - 175730 528 134 aa, chain + ## HITS:1 COG:RSc1965 KEGG:ns NR:ns ## COG: RSc1965 COG0848 # Protein_GI_number: 17546684 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Ralstonia solanacearum # 1 133 1 133 137 85 37.0 2e-17 MAFQLGEDHDSGMNEMNLIPLIDIMLVLMIIFLVTATVANPSIPLTLPKTTAEIIDPPPK AITISINANGEVAWDTQVISLDELQKRFQEAGQGAVKPTVQLRADKESKYDTVAQVMSRA SEAGLSDIAFVSEN >gi|333032594|gb|GL891832.1| GENE 165 175791 - 176312 692 173 aa, chain - ## HITS:1 COG:PM0605 KEGG:ns NR:ns ## COG: PM0605 COG0225 # Protein_GI_number: 15602470 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Pasteurella multocida # 2 172 3 174 174 200 56.0 1e-51 MQQALFGGGCFWCVEAVFLQIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFD EQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQTLKDDDL DIVTELSPAPTFYPAEDYHQNYYEKNPSQGYCNFAIPPKLLKLHSKFQHLMKN >gi|333032594|gb|GL891832.1| GENE 166 176413 - 177468 1011 351 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00466 NR:ns ## KEGG: ACICU_00466 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 351 1 351 351 714 100.0 0 MHNIGTREFIIALLFGALHSLFTLFIVLSSIWVCLALWVQQPFGWLGSRIIIGIWIAFAL SMAGLYFNGHIISRRTDVLIYLLAFACSLVWYFSITARQDRDWNPEVANMLSYEKHGDVI TLHNVRNFNWHPDGTYDVRWETRTFDLNQLNGINIITSYWMGPQIAHTLVSFEFKNQQPL VFSIEIRKEKTEEFSAIGGFFRKYELSLIASDEKDIVYTRSNIRKEQVYNFPVNMPRSEQ KALFLEYLKKADELRAEPKWYNTLTSNCTTLIFDMVQAINPYQLPKDYRLIASGYLPNYL YDLKALDQNISLKQWYQIAHINPRTEHFEQFADQSSEHFSQIVRQGLPKVK >gi|333032594|gb|GL891832.1| GENE 167 177483 - 177992 504 169 aa, chain - ## HITS:1 COG:mll1457 KEGG:ns NR:ns ## COG: mll1457 COG0262 # Protein_GI_number: 13471475 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Mesorhizobium loti # 12 169 7 167 172 135 43.0 4e-32 MAWQNVKVVHVVAMDKNHCIGKGNALPWHISADLKHFKEITQGGVVIMGRKTLESMGRAL PNRVNWVITRDINWHFDGVKIAYSIEDALNAALEDAKNTEKQALFIIGGGEIFKQTLSIA DRLELTHVDLDVQGDAHYPTIPSEFHKTASEQQVDEKSGTSFEFATYKK >gi|333032594|gb|GL891832.1| GENE 168 178037 - 178879 856 280 aa, chain - ## HITS:1 COG:NMB1709 KEGG:ns NR:ns ## COG: NMB1709 COG0207 # Protein_GI_number: 15677556 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Neisseria meningitidis MC58 # 1 280 1 264 264 392 67.0 1e-109 MRAYLDLLQHILDNGGDKGDRTGTGTRSVFGHQMRFDLSKGFPLLTTKKVHFRSIVIELL WFLKGDTNVKYLQDNKVTIWDEWATAEQTARFGRPEHELGPVYGHQWRNFGATKNADGTY NQDGFDQIKWLINEIKTNPNSRRLIVSGWNPNEAGQVALPPCHTLFQFFVQDNKLSCQLY QRSADVFLGVPFNIASYALLTHMIAQVCGLGVGDFVWTGGDTHLYANHFEQAKLQLTREP LPLCQLKLNPDVKDIFDFKFEDIEIVGYESHPAIKAPVAV >gi|333032594|gb|GL891832.1| GENE 169 179001 - 179363 206 120 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00469 NR:ns ## KEGG: ACICU_00469 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 120 1 120 120 207 100.0 2e-52 MLAYWYNVPRHIKLIFIIVVCAAIYAANQVQPLSPTYTVLSLVLGSGLHFGQYLQTKIPE HSSHKLKLQFLLRIYPLIIVAIIMWLLPPQHNWIATIQALGFVLVGFFLVSIYQNRAKRF >gi|333032594|gb|GL891832.1| GENE 170 179374 - 179733 259 119 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003074 NR:ns ## KEGG: ABBFA_003074 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 119 1 119 119 168 100.0 5e-41 MLEFWFNTQVPTFKKLIILIITLLICIGLYQYQPLPLDTILMFTGTGVIFLICRYFKLHF AQSNPTGLLYRLFTWVPIALLFALIFVKTMPNLLIWGVQGIAFMALAAFIFSPQSLFNK >gi|333032594|gb|GL891832.1| GENE 171 179807 - 180625 979 272 aa, chain - ## HITS:1 COG:PA0341 KEGG:ns NR:ns ## COG: PA0341 COG0682 # Protein_GI_number: 15595538 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Pseudomonas aeruginosa # 1 261 1 258 266 270 55.0 3e-72 MLTYPNIDPVAIHLGPLQVHWYGLMYLLAFLCAWGLASYRAKQRDGWTSDMVSDLVFYGA LGVVLGGRIGYVLFYEFDKFLENPIWLFQVWTGGMSFHGGFLGVMIAMLFWCKKYQKTWF QTLDFIAPCVPTGLMFGRIGNFIGGELYGRAVTDPNYPFGMIFPTDPLHLVRHPSQIYQA LCEGLLLFIILWWFSSKPRPRMAVSALFLMGYGVARFVMEFFRQPDADQGFILFGWMTKG QILTVPMLLIGLWMMWYAYQKKIYDWGPQKNS >gi|333032594|gb|GL891832.1| GENE 172 180719 - 181498 780 259 aa, chain + ## HITS:1 COG:RSc1780 KEGG:ns NR:ns ## COG: RSc1780 COG3332 # Protein_GI_number: 17546499 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 233 1 238 272 159 39.0 5e-39 MCIVALAWHVLDDMPLCLISNRDEFYHRPTALLYQWEHTPIIAGQDLQSGGTWMGVTPQG RWAVLTNFRDGRDKKQYETSRGHLVQAFLESDLLPIRFAQQLEQQQQNFAGFNLFMGTAD QAVYMSNRGEAPQVLANGVYVVSNGLMSDHWEKTRHLRTRFTQEFLPMHQHKTEELSLQH AAWDILEDERKVTTALLPNTGIQPEMEELLSSTFIQSPVYGTRCSNFLRMTNNEWIWLEK TQQGEHSGQIVQQQVLLNR >gi|333032594|gb|GL891832.1| GENE 173 181547 - 183880 2504 777 aa, chain - ## HITS:1 COG:PA2635 KEGG:ns NR:ns ## COG: PA2635 COG3211 # Protein_GI_number: 15597831 # Func_class: R General function prediction only # Function: Predicted phosphatase # Organism: Pseudomonas aeruginosa # 75 772 77 668 672 434 40.0 1e-121 MTELTPYHEDQELDNNTSDNIHFRDILEQHISRRSLITKAASGAVALTLASTLTGCNDND DDSGSNNGGTTPVDPNKKPEKLTFTPVAKNLNDIVTVPEGYEANVIYALGDSINPRVGDW DDNNIPSGPSFQFRSGDCHDGMHYFGLNTSTNRFDETVSAQGLLVMNHEYINQTFLHPKG PTKVDGRRPEDEVIRETNAHGVSVIHIKKDPTTQKVEIVKNSIFNRRITASTVMEFAGAA AGSSLLATRFSPAGRQTRGTHNNCGNGYTPWGTYLTTEENFIGYFQRSGSDEYARTDAEK IALKRYGLGVKKDEPYLYEKDEKGAPKKDKDGNIIYLKDKNGELIPNVDEQGRQIYLGTS SRYGWETAIGQVESQDLYDRWNADVKAAQATQDYRNGPNTFGWMVEIDPFDGRQNPVKRT SLGRFAHEDSACRAVVGQPLAFYMGDDSRGEYIYKFVSTAVWDTKDINGGYTAGDKYMNA GKLYVAKFNNDGSGQWVELAYGKNGLNESNTTYPFKSQADVVTFARLAADSVGATKMDRP EWCTVNPVNGEIYVTLTNNSNRGKDYATDAANPRNYTDLYAGTKEQKGNVNGHIIRFKET DDKTTAETFKWDIYLFGAEAAMASNINLSGLTDNNDFSSPDGMWFDPRGVLWIETDDGAY TDVTNCMMLAALPGQIGDGGTATTSNGQQTITGAKVTDATLRRFLVGPKQCEITGIAMTP DYKAIFINVQHPGEDSPSYAKPESNWPATQKDPSNKTARPRSATVVITRKDGGVIAG >gi|333032594|gb|GL891832.1| GENE 174 184089 - 186269 2102 726 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00474 NR:ns ## KEGG: ACICU_00474 # Name: not_defined # Def: putative phosphatase putative alkaline phosphatase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 726 1 726 726 1421 100.0 0 MTTASNHPTRRDILKWFTGIPFLPLGAMATAATLAGCNDSDNDSSIVTPSKPINFKNATF TSMPAPSTVADIATTACASKLAISWEDGSKTEYQLAYKPFFLTGTEVPDGKGGKVIAGGY YDINNKPIIDKSVAGKERQFFSDCPDGSSLISFKQATGKDFTDADKKALGVTGNPVFHVV QFEYLSKDQNGGDTYGKLSSPIAVLTLDQDPKTGHLTLIKYHNVDTSSAHGLWITCGASL SPWGTHLSSEEYEPDAFDQKLGQSLSTLKAFSKNIYGDENIANPYNYGHLPEITVNADGT GRVTKHYCLGRISHELVQVFPDNRTVLMGDDYTNGGLFMFVADKEKDLSAGTLYVAKYTT VLSDTTTGQISWIRLGHATSAEIENLIKSGIKGTDIFESVLQIAKYPSDATIAEKEAIDA GDKGTPEQQALAKAAKERLKLQQAAQKAELEAQGFKFTYLSKTGVYLKLKDNSDRTKLAA AFLETHRYAAYMGASMALTKNEGTTVNIADKKAYSALANIVDSMVEGGSGYLAEHNVKFP KITAGGILEHTLTGGQKDSSNVAINSEWVPSQSNLLIKGKDISFDSLGNTADPEQIASPD NLKFSEKLRTLFIGEDSGNHLNNFLWAYNVDTKQLIRILSTPAGAESTGLHAVDEVNGWT YIMSNFQHPGDEWNRFYKEKDGVRTGISADLLAQIDTAINTNYSNKFAAAVGYITADPIA PSVVKK >gi|333032594|gb|GL891832.1| GENE 175 186442 - 187212 591 256 aa, chain - ## HITS:1 COG:PA5070 KEGG:ns NR:ns ## COG: PA5070 COG0805 # Protein_GI_number: 15600263 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway component TatC # Organism: Pseudomonas aeruginosa # 13 253 10 250 267 253 57.0 4e-67 MNQLPSTAVNSQENLDQMPIMNHLVVLRRHLFRIVGVTLFLFFCLLPFRNHTYQLLSEPL RLQLPASSSMIATDVTATFMAPFKLNLFVALMLAMPFILYEIWSFVRPALYQKERHLALP LLIGSIILFYAGVAFAYYITLPAILHFFISVSPETVAPMTDINSYLSFCLKLFLVFGVTF EIPIATLLLILIGVVNTQSLAEKRRFIIVGCFFVAMFITPPDAISMVMLAIPMWLLFEIG LLFGKILEKRKTHSAE >gi|333032594|gb|GL891832.1| GENE 176 187209 - 187646 527 145 aa, chain - ## HITS:1 COG:NMB0600 KEGG:ns NR:ns ## COG: NMB0600 COG1826 # Protein_GI_number: 15676505 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Neisseria meningitidis MC58 # 1 83 1 79 228 68 45.0 3e-12 MLDVGMTELLCFAIIAILVLGPEKLPEAARFAGRWYVRLKRYITNLQNEIDQELRLSEFR KEMQEELNRIEALERKVQQQLEEIQKQQVSESLEATETAKTTQKPIRKCTPISGHYKVPY LTKVTPLAPQTDISETSPVELKIAV >gi|333032594|gb|GL891832.1| GENE 177 187658 - 187876 295 72 aa, chain - ## HITS:1 COG:VC0086 KEGG:ns NR:ns ## COG: VC0086 COG1826 # Protein_GI_number: 15640118 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Sec-independent protein secretion pathway components # Organism: Vibrio cholerae # 1 53 1 53 82 57 50.0 5e-09 MAGLSIWHVVIFAIVVILLFGTSKLKNIGKDVGGAVRDFKKSVREEDEAASLNSPRTIDA QVKTSESTSVKS >gi|333032594|gb|GL891832.1| GENE 178 188129 - 189004 739 291 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00478 NR:ns ## KEGG: ACICU_00478 # Name: not_defined # Def: putative permease # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 291 1 291 291 506 100.0 1e-142 MALLLPVLAFITGLLLAQTSISETVKPILSAWLARLLIPIVIIYNMVFYQSGSLSLMLFS FGSAFIIFFAYLALFKDRLLALCVSYTNMGWLGFPFAMALFGPEATAPIVALYIGMSLFG NAWAVTAVTTAPQSKLNILKKVLTSPPCISIFCAVVLRLLGTQHIESPAIHWVYEVAKFA MTFAGMCVLGMWLRRTRVYAKDLIYSTKAQAFKVACGFVLCGLSYRFLQIPNINQHIGVM FLMFCLPPAANIVALETHYQGTGRSAAYIASGTIVSCVCIAIYAMFLHVAL >gi|333032594|gb|GL891832.1| GENE 179 189197 - 189823 472 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90023287|ref|YP_529114.1| ribosomal protein L33 [Saccharophagus degradans 2-40] # 12 200 4 188 200 186 52 8e-46 MSTPHWFDQGSLVLASNNKGKVAEFEKLFEQLKLPVEIIPQGHLNIPDAIEDGLSFIENA IIKARHASKISGKPAMADDSGICVPVLGGAPGIYSARYAGEHGDDAANNAKLLNDLLPFR KNGEAIEGMFVCVLALVTHAEDPLPQIFQGIWHGEILEAPRGENGFGYDPLFWLPELQVS SAELSKEEKNKISHRGQAMQLFRESLQK >gi|333032594|gb|GL891832.1| GENE 180 189992 - 190579 851 195 aa, chain - ## HITS:1 COG:BMEII0466_1 KEGG:ns NR:ns ## COG: BMEII0466_1 COG0790 # Protein_GI_number: 17988811 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Brucella melitensis # 44 195 44 213 255 66 29.0 3e-11 MKKTLFSTLIAGLLSMQAHADYIAQPQSVASQAARFSTMGIHDLQKAAQAGQAGAQFYLG TRYQYGKDVAKDDKQAFAWFKTAADQGLSPAQLNVGRMYADGIGVKKDEAMARKYFEKAA SNGDNRASYNLAMMEEQKKNYVGAYQWYELSTRDGMLDNKVISLSEGKKTALAANLTQEQ IRMARDRADKWIQAQ >gi|333032594|gb|GL891832.1| GENE 181 190576 - 191169 686 197 aa, chain - ## HITS:1 COG:PA0389 KEGG:ns NR:ns ## COG: PA0389 COG0500 # Protein_GI_number: 15595586 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 1 196 1 196 206 243 55.0 2e-64 MRIDQQLAEKWIKPGSSVLDLGCGDGELLAHMSQKHQIRAYGLEIDQEKIAIAVSRGLNI IQQDLNLGLSRFADQSFDYVVMAQALQAVDAPDVLLRDMVRVGKQAIITFPNFAHWKTRS FLALKGMMPVSDALPYMWYNTPNIHLCTFKDFEALCAENQIQIINRLAVNGNQQGSLLSK HVPNLFGEVAIYRVSAL >gi|333032594|gb|GL891832.1| GENE 182 191169 - 192329 1102 386 aa, chain - ## HITS:1 COG:PA0390 KEGG:ns NR:ns ## COG: PA0390 COG2021 # Protein_GI_number: 15595587 # Func_class: E Amino acid transport and metabolism # Function: Homoserine acetyltransferase # Organism: Pseudomonas aeruginosa # 3 372 5 374 379 525 66.0 1e-149 MSFPADSVGLVTPQKFQFEEPLHLECGRVLPRFELMVETYGTLNADKSNAILICHALSGH HHAAGYHHEDDKKAGWWDSCIGPGKAIDTNKFFVVALNNIGGCSGSTGPTSPNPENDNRP YGPDFPLVTVRDWVKTQAMLSDRLGISVWYAVVGGSLGGMQALQWSVDYPDRLQKCVVIA SAPKLSAQNIAFNEVARQSILSDPDFHHGRYLENDSYPKRGLILARMVGHITYLSEEAMK QKFGRDLKSGKFMYGFDVEFQVESYLRYQGEQFSRNFDANTYLIMTKALDYFDPSREYGH SLTEAMSKTKCQFLIVSFTTDWRFAPSRSQEIVDALITNHKPVSYLDIDAEQGHDSFLFP IPLYVKTLRAFLGGEEHLKSTSLEAS >gi|333032594|gb|GL891832.1| GENE 183 192413 - 194110 2024 565 aa, chain - ## HITS:1 COG:RSp0322 KEGG:ns NR:ns ## COG: RSp0322 COG0119 # Protein_GI_number: 17548543 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Ralstonia solanacearum # 2 549 1 551 576 694 59.0 0 MMLADPSKKYRRMYQRVDLPDRQWPNNEITKAPIWMSTDLRDGNQAIFEPMNMEQKFKMF KMLVKIGFKHIEIGFPSASQIDFDFTRMLIEENHIPDDVYIEVLVQARDHLIERTFEALA GAKRAIVHIYNSNSPTFRQKVLNVDVNGAKQLAVNAAQKVKEYAAQYPETDWIFQYSPEC FSATELEVAKEVCDAVTEIWDARPDHKVILNLPATVEVSTPNVYADQIEWMHRNLARRDG VIISVHCHNDRGCGIAASELAIMAGADRVEGCVFGNGERTGNVDVAAIALNMYTQGVAPE LDFSNINEVIATVEECTGLPVHPRHPYAGDLVFTAFSGSHQDAIKKGFEYQKNEEIWDMP YLPIDPKDLGRDYDAVIRVNSQSGKGGIAYLLESNYNVVLPRRLQIEFSQVVQQYTDENG TEISAKQIWTLFKDTYVEVKNHHYTVKNYKLSDINGTQIIELEIDVEGETQQLRGEGNGP ISAFLNALQLPIDVLNYEERSISSGANAKALTLIELQVKGTGRGSFGAGVHDNTVTSSIE AIIACTNRLIDQGVLSTDQVVAAAV >gi|333032594|gb|GL891832.1| GENE 184 194569 - 195192 487 207 aa, chain - ## HITS:1 COG:PA4515 KEGG:ns NR:ns ## COG: PA4515 COG3128 # Protein_GI_number: 15599711 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated protein # Organism: Pseudomonas aeruginosa # 1 207 21 226 226 255 54.0 3e-68 MDKIEWVNGKVTAGTLSATVKRNQQLPEDHPLTHHLSNIILEALGTHPLFLSAAIPLDII PPLFNRYENQESFGFHVDNSIRRIRGTNERLRTDLSCTLFLSEPEEYEGGDLVVEDTYGY HEVKLPAGDMILYPSTSLHEVTAITSGCRIASFFWVQSMVRDDAERHMLFNLDQTVQNLR MQLGDNHSEVIKLTNLYHNLMRKWAEL >gi|333032594|gb|GL891832.1| GENE 185 195357 - 197588 2030 743 aa, chain - ## HITS:1 COG:PA4514 KEGG:ns NR:ns ## COG: PA4514 COG4774 # Protein_GI_number: 15599710 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for monomeric catechols # Organism: Pseudomonas aeruginosa # 37 743 55 753 753 565 44.0 1e-160 MSLIRTRKKIVSSAIASSLSMIATTAMAQEAVSQLPTIHTKATQEESLKVDQSANSKFVA PLLDTPKSVSVISKQLIEDTKVTTLADALRTVPGITLGAGEGGNPNGDRPFIRGYSSESS MYIDGIRNSTSQNREMFAVEQVEVTKGSASAMGGAGSVGGSINMISKVAKKGDFLEGSVA AGTDNYQRITLDGNKDFGNGIAARVAVLGHQNEKAVQSNGAEYKRVGIAPSITFGLDTPT RATLSYYYLQTDDKPDSGIPYWDSSLGKAQGKPAEVKQGTYYGWKDRDFQKQENHIGTIK LEHDLTDNITITNTAMYAKSKNDYVWTNPDDSKGNVGKGLVWHRLNSAITDSETFTDQLA LTGKFDTGFLKHRFNVGAEYSKQKTDKGGYNIIDAKGNVSSTGFYSDCSDLSTNWCTSLN GPTQKPFVDRLQARPDFDATVESTSVYLLDNIEITPKWLLDLGLRWDKFEAEQNFLATSS AAAYTAKNDSDFVTYQAGITFKPTENGSIYTSYATSASPVGLNAGWGDNSETINANNQMI DPEEAQTFEIGTKWDFLDNHLNLTAAIFRTEKQNTRVQIDPTTYANVGESKVDGFELGLN GEITDKWNISAGYTYLDSELTKNGKSCRSGKCTDQSIYNGNQMPNVPKQAATLWTTYRVL PQLTVGAGAVYSDKVYGDVANTKWVPSYVRYDAMARYNVNKNVDLQLNINNLSDKRYFTK AYASHYATEAEGRSAVLAVNFKY >gi|333032594|gb|GL891832.1| GENE 186 198003 - 199337 1912 444 aa, chain + ## HITS:1 COG:YPO3158 KEGG:ns NR:ns ## COG: YPO3158 COG0544 # Protein_GI_number: 16123320 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Yersinia pestis # 1 440 1 433 434 356 47.0 6e-98 MQVTTEAVSGVARRLNVSVPTSRINEQFEARLKRTAKTVKINGFRPGKVPANVVRREYGA SIYQEVVNDIIRDSVFEAIQQEKINAVGMPNIEKVEHKEDALVFEATVEVYPEVEVKAFD GLEVERKTAEIKDADVDTMIENLQKQRQTWAVTKGMAKKDMQVTFDFEGSIDGEKFEGGS AEDFKLVLGSGRMIPGFEDGIIGMKAGEEKVIDVTFPEDYQAENLAGKAAQFKITVKQVE KPKLPEIDAEFLKIFGVSEEEGIEKLKADVRKNMEREVRNGLRNQVKQAAFDALVAANEI EVPAAMVAQEIDRQRQQMVQQFTQQFGGAGAQSFDKSMLPDELFKEQAERSVKLGVLVSK VLADAKLEVDQARVDAYIDDMASSYEDPTEVIEYFKNDAQQRAQIEAVVLEDQVVDHILA SAKVTDKAVSYEDLLKEQQARRMG >gi|333032594|gb|GL891832.1| GENE 187 199530 - 200135 871 201 aa, chain + ## HITS:1 COG:VC1922 KEGG:ns NR:ns ## COG: VC1922 COG0740 # Protein_GI_number: 15641924 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Vibrio cholerae # 6 200 4 198 200 313 77.0 2e-85 MYVPTIENALVPVVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEA ENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRY CLENARVMIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYDTIARDTDRDN FMTAQAAKEYGLVDQVLSKRP >gi|333032594|gb|GL891832.1| GENE 188 200237 - 201550 1491 437 aa, chain + ## HITS:1 COG:PA1802 KEGG:ns NR:ns ## COG: PA1802 COG1219 # Protein_GI_number: 15596999 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent protease Clp, ATPase subunit # Organism: Pseudomonas aeruginosa # 10 418 15 422 426 564 69.0 1e-160 MSEHPQGQKHCSFCGKTQSEVGKLIAGEDAYICNECVDVCLDLVQTSQQVEAGDWASKAL PKPHEIRAALDQYVIGQDLAKKTLSVAVYNHYKRLKVGQSGHVSKDVEIAKSNILLIGPT GSGKTLLAQTLARLLDVPFAMADATTLTEAGYVGEDVENIVQKLLQKADYDVEKAQKGII YIDEIDKITRKSENPSITRDVSGEGVQQALLKMIEGTVASIPPQGGRKHPQQEFIQIDTS NILFICGGAFAGLEKIVQQRQEKGGIGFTADVKNKDETKKLAELFRQVEPTDLVKFGLIP EFIGRLPVIATLEELDEEALMQILTEPKNALTRQYQYLFNMENVDLVFEDSALRAVAKRA LERNTGARGLRSILENVLLETMYDLPSRTDVGTVFINEAVINGEAEPVYKSERQPKEAVT HESVAKADLKVIDSKSA >gi|333032594|gb|GL891832.1| GENE 189 201698 - 202414 591 238 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00489 NR:ns ## KEGG: ACICU_00489 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 238 1 238 238 496 100.0 1e-139 MRYLIIALSCATLLAGCQSSSHLEKNSGELTATLPKVDVDKEPGLLDQYRLGGFTVGGWV NQKLGQTFAPVKPQNEQAAVVYLYRPDTKWNRQEIAAINLFVNGKRIPSLLHNHYYWIEL PAGTYRISASRPLLGIHFQEPKYIDITVDAGASYYLKYDEENKMDRSEHTGPFMLMQDNI GRREIAFTELKSSSYNFVAEDASGKIRHKPQELKPAKYNEKSDVHLIKPFKLWNPLTW >gi|333032594|gb|GL891832.1| GENE 190 202439 - 202993 647 184 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003054 NR:ns ## KEGG: ABBFA_003054 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 184 1 184 184 297 100.0 2e-79 MTIRPILKNLSISLCLSCITTSLFASPAKLSSVKELMQMSQIDYLLKESINELTPYYDQQ AEQIISNITGIKTLGPKEKEAAKKLGLLLKDSSNQLISSPKTTQALQDIYLKTYTEEEIQ ANLKFLKTPEGQSITRKNVQIMGQISEYMMELGQQTFNDPKARDHMQEEMLKIIAPLMKD KEKS >gi|333032594|gb|GL891832.1| GENE 191 203135 - 204661 2619 508 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634422|ref|YP_001708158.1| fumarate hydratase [Acinetobacter baumannii SDF] # 1 508 1 508 508 1013 100 0.0 MTTIIKQDDLITSIKDALQFISYYHPQDFIQAMSRAYDREENKAAKDAIAQILINSRMCA EGHRPICQDTGIVNVFLEVGLDVKFDLTMSLDDAVNEGVRQGYLENSNVLRASVLADPAF GRKNTKDNTPAVIHYKLVPGNKVDITVAAKGGGSENKSKLAMLNPSDSIVDWVLKTVPTM GAGWCPPGMLGIGIGGTAEKAMMLAKEALMEEINMDELLRRGPENKIEELRIEIFEKVNA LGIGAQGLGGLTTVLDIKIKDYPCHAAGKPVGMIPNCAATRHAHFQLDGSGVAHIQAPKL EDYPSVTWDASQSKRVNLDTITQEEMDSWKPGDTLLLSGTMYTGRDAAHKRMVEMIDNGE ELPVDLKGKFIYYVGPVDPVRDEVVGPAGPTTATRMDKFTRKVLEHTGLFGMIGKADRGP TAIEAIKDNKATYLMAVGGAAYLVSKAVREAEVVAFADLGMEAIYKFVVEDMPVSVAVDV NGTSIHAVAPKIWQAKIGKIPVIDAAAG >gi|333032594|gb|GL891832.1| GENE 192 204889 - 207033 2171 714 aa, chain - ## HITS:1 COG:DR0073_2 KEGG:ns NR:ns ## COG: DR0073_2 COG0280 # Protein_GI_number: 15805114 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Deinococcus radiodurans # 384 712 7 336 339 474 74.0 1e-133 MNTILLIPTGEGVGLTSACLGMIYALDCNGIKAGFLKPFSQVDQENLDRTTSLFGHLFQS KTVQSISHEKLTQRIAAGEVDELLEEAVSLHRSIAADNNVIIVEGLLPNGQDHFASELNA SLAQALDAEVVLVSTADIQNPRKTAEKVEAHLRQFGGATSNRTAGVLFMRTRGLSEETAQ IPVAFDPSLRPTEDIAKFTAELQKYNRYFGSSDLPIIGLVPFSNTLSVPRTLDIASVIDG QWINQGEAKTRRILHSSLIASSIEYELNKFIAGELIISASERTDVLLASSLATSNGIPLA GLVLTEREAPAPKLLEFCQSAIKQGLPILHTHLNTLETAQRLSDFGNEIPTDDTERAEQV TRFVSSHIDVEWLKQHSNNGAIPRLSPSAFRHELVQKSIAAKKRIVLPEGDEPRTIEAAT ICQARGIAHCILLAKPEAVHDVAKARGIELPAGLEIIDPDQIRDQYIAPMVELRKGKLND LQAKEQLQDTVVLGTMMLALDHVDGLVSGAVHTTANTVRPAFQLIKTAPAYSLVSSIFFM LLPDEVYVYGDCAINPDPTAEQLAEIAIQSADSAKAFGIDPRIAMISYSTGTSGTGADVE KVQQATQIAQQRRPDLLIDGPLQYDAASVESVGRQKAPDSRVAGRANVFIFPDLNTGNTT YKAVQRAANVVSVGPMLQGLNKPVNDLSRGALVDDIVFTIALTAIQAEQQAAAK >gi|333032594|gb|GL891832.1| GENE 193 207077 - 208279 1460 400 aa, chain - ## HITS:1 COG:PA0836 KEGG:ns NR:ns ## COG: PA0836 COG0282 # Protein_GI_number: 15596033 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Pseudomonas aeruginosa # 4 388 5 394 394 448 61.0 1e-126 MATSVLVINCGSSSIKYALVSERREDRIYGLAENLGAADARIKGITVGGEPLELSIPYAD HAKALETLLARLANYKPQAIGHRVVHGGSLTKAELLTPEIVERIRAATPLAPLHNPAHLI GIEATMRLFPELPQVAVFDTAFHQTMPAHAYRYAIPKFLYTEHNVRRYGFHGTSHAYVSD RGSELAGKFQKGGWLTAHLGNGSSTCAVWNGQSVDTSMGLTPLEGVVMGTRSGDVDPSLH SFLAKNLGWDLAKIDKVLNNESGLLGLSQLSNDMRTVIEAAENGNEDACLAIEVFSYRLA KSLAALSCGLPSIDGLIFTGGIGENSAYIREKTLAYLPHFGLQLDKDQNNNLKRGTEGRI DSGTGPQIWVIPTDEEGRIAKETRQVVEVSQNTSPEVSLA >gi|333032594|gb|GL891832.1| GENE 194 209042 - 210895 2108 617 aa, chain + ## HITS:1 COG:RSp1560 KEGG:ns NR:ns ## COG: RSp1560 COG0129 # Protein_GI_number: 17549779 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Ralstonia solanacearum # 7 602 6 600 609 748 62.0 0 MDLPNPVLAKVTERVIARSQKTRSAYLQRIEHAQGKFPARGALSCANLAHGFAGMEDNEK LIIKVGREPNIGIVSSYNEMLSAHAPYKTFPDIIKTAARENGGVAQFAGGVPAMCDGITQ GNAGMELSLFSRETIAMGTAIALSHNMFDAALCLGVCDKIVPGLLIGALQFGYLPTIFVP AGPMSSGLSNDDKAKIRQQFATGQVGRDALLEAESAAYHGQGTCTFYGTANSNQMLMEVM GLHLPSAAFVHPHTPLRDALTAEAAKRVLDLTAERGNYTPIGHVIDEKAIINGIVALLAT GGSTNHTLHLIAIARAAGILIDWDDFDELSAVVPLLAKIYPNGKADVNHFQAAGGVAFLI RNLLEAGLLHNDVTTVAGKGLLHYTKEPKLIDGKLTWVDGVVQSLDDKVLRSIDAPFQPD GGLRLMQGRLGRGVIKISAVAPEHRKVKAPAIVFDSQEAVQAAFDRGELHRDFIAVVRFQ GARANGMPELHRLTPVLGVLQDQGFHVALVTDGRMSGASGKVPAVIHLSPEALLNGPIGK VQTGDMLIIDAEAGVLDIELDEQTWQSRPVAQPEHQAENEVGFGRELFGVFRAAAAPAEH GASVFGALVGEEPQGQI >gi|333032594|gb|GL891832.1| GENE 195 210916 - 211536 779 206 aa, chain + ## HITS:1 COG:RSp1190 KEGG:ns NR:ns ## COG: RSp1190 COG0800 # Protein_GI_number: 17549411 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Ralstonia solanacearum # 4 197 3 197 208 205 55.0 4e-53 MSKIEDVVKLGPVIPVLAFDSAEQGEHVSRALHAGGVKVLEITLRTAAGLAAIERASQLA DDIVVGVGTITKPEHCAQAKKAGAKFGVSPGLTKDLHLAAQDAGLPLLPGVMTPSDLIQA IELGYDIVKFFPAQQAGGVEMLKAFYGPFPNLRFCPTGGITAETAPDFLKQPNVVCVGGS WLTPKPVVAAQDWAEITRLAQIASQL >gi|333032594|gb|GL891832.1| GENE 196 211732 - 213090 1298 452 aa, chain + ## HITS:1 COG:RSp1189 KEGG:ns NR:ns ## COG: RSp1189 COG2610 # Protein_GI_number: 17549410 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Ralstonia solanacearum # 1 440 1 438 450 501 69.0 1e-142 METVQGGMLLVYTLIAIVALIVMIAKFRIYPFLVLIIVSLGLALAVGMPMDGIVKSYEAG TGKTLGHLAIVIALGTMLGKMMAESGGAERIAITLIKWFGEKHIHWAMMFIALIVGLPVF FEVGFVLLIPIAFNIAKRTGKSLLIVGLPMVAGLSVVHGLIPPHPAALLAVQAYHADIGK TIMYSLLVGVPTAVVAGPLYALWINKYVKLPENNPLAKQFVEADANNTRELPSFGITLFT IMLPVALMLVGSWADVFFAPKTFPNELLRFIGTSDIALLIAVLVSFITFGTMQGFNREQI EKFCGGCLASIAGILLIVGAGGGFGGILRDSGISNEIVSTALKANLSPLLLGWLVAALIR LATGSATVAMATACSIVAPIAAAAGVVVRPELLVLATGSGSLIFSHVNDAGFWLIKEYFG MTVGQTLKTWSVLETIISVLGLSFTLLLSAVL >gi|333032594|gb|GL891832.1| GENE 197 213108 - 213620 528 170 aa, chain + ## HITS:1 COG:RSc0441 KEGG:ns NR:ns ## COG: RSc0441 COG3265 # Protein_GI_number: 17545160 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Ralstonia solanacearum # 1 161 1 159 169 177 51.0 6e-45 MIVIAMGVCGTGKTLIGELLSERLACEFLDGDTLHSAANKSKMSQGIPLTDEDRLPWLQA IRQAIEAKQRDGETAVFTCSSLKRMYRDILRGQDQNVKFVYLKGSYELLQQRLAERSGHF FDPALLQTQLDTLEEPDVNEAIAIDIALTPEQIIEQVIQKLGVTDSVCRG >gi|333032594|gb|GL891832.1| GENE 198 213793 - 215421 1545 542 aa, chain + ## HITS:1 COG:PA2323 KEGG:ns NR:ns ## COG: PA2323 COG1012 # Protein_GI_number: 15597519 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 6 542 6 541 541 635 56.0 0 MNQLNNLQHKFPVVDGIPESVRLPSQIHQRVSLVDGELKLWAGATKKTLSPIWIQQPDGS LEQVELGSYPVMGEKESDEALEAAVRAYNNGRGEWPMMKVSERIACMQNFIQRMVEQRDL IIKLIMWEIGKSLADSEKEFDRTITYMRQTIDALKDLDNANSRFVIAEGTIGQIRRTPLG VVLCMGPYNYPLNETFATLIPAMLMGNTIIFKPPQFGTLLFEPLLEAFRDSFPKGVINTI YAPGSLVVPHLLASGQINVLALIGSSKVADHLKKQHPKSHRLRAILGLDAKNAAIILPDA DLDLTVKECLLGALSFNGQRCTALKMLMVHRSIADEFVNRLTTELAKLKVGMPWEKGVSI TPLPGMHRTAYMTEVIEDAVAKGAKVVNPEGGEFCKTMFYPAVVYPVTEGMRLYREEQFG PVVPVAVYDDIETVLDYVTTSDHGQQVSIFGSDPAQIGHLVDTLVHQVCRVNINCQCQRG PDVFPFGGRKDSAEGTLSVHDALRAFSIRSMIAAKQTDDSKGMLASMVSEHYSKFVNTDF IF >gi|333032594|gb|GL891832.1| GENE 199 215528 - 216793 1487 421 aa, chain - ## HITS:1 COG:PA4007 KEGG:ns NR:ns ## COG: PA4007 COG0014 # Protein_GI_number: 15599202 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Pseudomonas aeruginosa # 1 420 1 420 421 504 64.0 1e-142 MQDSIEQYMQKVGQQARDASRVLTSASTSLKNHALSAIYTALENNQAAILAANQIDMEKG RSNQLDSALLDRLELTPARFKGMLQGLKDVIALVDPIGEITDLAYRPTGIQIGKMRVPLG VVGMIYESRPNVTLEAASLAIKSGNAIILRGGSEALESNKAIAEAVKHGLKVAGLPEHSV QVIETSDRAAVGHLITMAEYVDVIVPRGGKSLIERVTNEARIPVIKHLDGNCHVFVEAQA DLQKALPITLNAKTHRYGVCNAMETLLVDEKIAEVFLPHIAELYAEKQVELRGCPETRRI LGTTVKPATEEDWYTEYLGPILAVKVVSGIDEAIDHINKYGSHHTDAIVTENYTLARQFL ARVDSSSVVVNASTRFADGFEYGLGAEIGISTDKIHARGPVGLEGLTSQKWIVLGDGQIR Q >gi|333032594|gb|GL891832.1| GENE 200 217093 - 218406 1202 437 aa, chain + ## HITS:1 COG:PA4008 KEGG:ns NR:ns ## COG: PA4008 COG0596 # Protein_GI_number: 15599203 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 24 347 7 324 407 189 35.0 8e-48 MNSIIQMDSEINQAYAGFGFFDIYHRDSFKQPARTTWIDGWKIEYMAIADPQTIHKTPIV IVGGAFQNFNSYKYCVEQLFESGPVILIDLPSMGANQQITNRDTGISAGTLELPDLSEML GRWLDIVGIQKVSVMGMSLGSVVASCFAYHRPDLMDRMILMGVMQKTRKSWRMILEESLK LMQENRMEEFGQAVILYLVNHAKLDKTRMSPTAKKLFFRQMAEFTGTERERYEINCNRLL RLTDVPIPECKTLVAAGQYDSFTLPHENANFALQCPDMEFALIANADHVPQLQRRKETMS LFTSFLKGEPIQNLDGIIPMTREQMQNMERRGEERIPVLQPKTKLSHRECETEVPVMIID VTFFGMYLKLDDVAQLEFVNEHPRDLALHLEDEEGAFSIECLIFEATEQGVRALFKHGSF ELADRLSRFITRQKQAA >gi|333032594|gb|GL891832.1| GENE 201 218461 - 219303 694 280 aa, chain - ## HITS:1 COG:PA4009 KEGG:ns NR:ns ## COG: PA4009 COG3315 # Protein_GI_number: 15599204 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: O-Methyltransferase involved in polyketide biosynthesis # Organism: Pseudomonas aeruginosa # 10 253 11 260 285 159 35.0 5e-39 MTQHLSKHRHISFTAHYTGYIWYQMGISHEALATSKGKSLAYLIHPLESWAEKYVGGSMR TTLKQRHTMLDHDLEKLIQENPDLQVLEIACGLSPRGWWFRQHYPSISYRELDLPDMAHT KQNALQQIEKNAPEVLSVDLFTEAFAQAFEVFDSNRPLVVISEGLINYFDKDLLKQLIQS IAHYGASFKKLHYLTDLYPEPVKNKLASIIWNSSKLLKLMSRSSFSFHFKTPLEVKDFFK DAGFSQVNVEQPQIFFGQVSKNSDEEHLGDLVWTIHTQLK >gi|333032594|gb|GL891832.1| GENE 202 219388 - 220407 1281 339 aa, chain - ## HITS:1 COG:PA3005 KEGG:ns NR:ns ## COG: PA3005 COG1472 # Protein_GI_number: 15598201 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Pseudomonas aeruginosa # 1 309 1 305 332 351 61.0 1e-96 MIGALMLDIAGTELTQEDIELLQAPQVGGMILFARNIESPQQVRALTDHMRQVRPDILIA VDQEGGRVQRLKSGFTLLPAMGRFGELYITQPQKALELAEQCGWLMATEVLAVGIDFSFA PVLDLNAISDVIGDRGFSKNIEDIAPLAGAFMRGMKKAGMANTGKHFPGHGSVKADSHVA AAIDSRSYDEIYNHDMQSFIKLMPELDALMPAHVIYDQVDPNPAGFSPFWIQEVLRNRLK FNGVLFSDDLSMQAACVAGGADARIQAALAAGCDMGLVCNDRSAACTALDGITNLELPNQ ERLERMRGRIPQIQVGETLSLGNDWQAVKTAIEEFKNSL >gi|333032594|gb|GL891832.1| GENE 203 220600 - 222783 2501 727 aa, chain + ## HITS:1 COG:PA3257 KEGG:ns NR:ns ## COG: PA3257 COG0793 # Protein_GI_number: 15598453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Pseudomonas aeruginosa # 38 726 38 693 698 406 35.0 1e-113 MKLQTIACAVAIATGGLFFSHTMNEARAATNTAAVSQSIQPTQEQALVARQLATLVDRQH YLNMRLDANTSNRILDMYLDSLDPDHSLFLDAEVQNYKKLYGSNFGASLKAGNLTGPFAI HQQYRERLKQFYEFMLAELKKPQNLKQPNTFIEVDREKAPYFKTSAEQQNHWRKMLVSQL INLTISREEEQAKQKALKENPSLADGQDLTGPEDLTPAQTLTKRYTRQLERISRVKSDDV LDKTLNAMLATYDPHSNYYPPIDAIELNRQTTLQLEGIGVSIRPERGNEDYTKIETIVEG GPASKSGQVKSGDRIVGVAQEGGKMVDVVGWSSSEIVGLIRGKRGTKVTLKLLGAGASMS QARNVTLVRDVIQEEDAGVRSRTVEVTRDGKKHLLGVIEIPSFYFDYRSRRAGQQYRSVS EDTANAFEALKAKKVEGIIIDLRNDPGGSLEEVARMLGQVIKSGPVVQIRDGNGNVSVFE DNDGGQQIYTGPLAVLVNLASASASEIYSAAIQDYERGIIIGSTTTGKGTAQVQLDTLAY GQATLTQRKFYRVTGGSTQNKGVVPDIKLVDIYNEEFGERKSKNALKWDTIPTAPFKREG SVQPYVAKLSQLSEQRVAVDPQFKYLNKRTAIAKVTSDQKQVVLDIDKRRAELLSLEKQT LDAENERRIATGQKPFPNWESYQASLDALAESRAKMKANQRPALPEEETFVNEAANVLMD YAKLQNR >gi|333032594|gb|GL891832.1| GENE 204 222922 - 224220 925 432 aa, chain + ## HITS:1 COG:PA0842 KEGG:ns NR:ns ## COG: PA0842 COG0438 # Protein_GI_number: 15596039 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Pseudomonas aeruginosa # 45 427 1 381 406 263 39.0 6e-70 MDGAMQGSYATALLKQQQLPESFQFYFKQKQHLSNTQELHQLHELVRPRLKIAIVTETWP PEINGVALSLLQLCQGLQKQGHKILLVRPEQKAKCHDFLPEQECLVMSQAIPKYPTLQFG WPQYLKVSKAFEKFVPDVVHIVTEGPLGLTAMQAAKAKNIPVSSGFHSPFQDFSRFFDLA FLVKPIQKYLCWFHNNTQVTCVPSKDTEEALRGFGITCPLVVVGRGVDTTRFSPKHRSES LRQQWGVDSNTRVMLYVGRLSPEKEVQLIVESYAAMQNIQQQKTKLVVVGDGPDLARLKA LPEAKNVIFTGSLRGHDLAVAYASADVFVFASQVETFGNVVLEAMASGLPVIAYDYACAH QYLIHGVNGWLSPLGHKNHFIQQIYQLPSIQQLREMGIQACHKVQQSGWQLPVQQLEQAF YQVVKEPSADFT >gi|333032594|gb|GL891832.1| GENE 205 224245 - 224796 623 183 aa, chain + ## HITS:1 COG:VC2488 KEGG:ns NR:ns ## COG: VC2488 COG0671 # Protein_GI_number: 15642484 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Vibrio cholerae # 10 175 8 173 178 84 34.0 8e-17 MKFKNAKIKILDLDLRGCLYLNNFSHSQRVALFFKIISRAGDGPFWYLMLAIVWGMQGIT YSLQIIYLLLGGSVGTAIYKFLKHKTTRPRPYQVHQVIVLGERPLDHFSFPSGHTLHAVM VTIVLGYIQPVLLAAMLPFMVLVALSRMVLGLHYPSDVIVGALIGAAVASLIIFVAPLLS IAL >gi|333032594|gb|GL891832.1| GENE 206 224896 - 225096 352 66 aa, chain + ## HITS:1 COG:STM2537 KEGG:ns NR:ns ## COG: STM2537 COG2975 # Protein_GI_number: 16765857 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 64 1 64 66 76 59.0 1e-14 MGLRWTDTIDIAIELSEAHPEVDPQWIRFTDLHAWVCALPDFSDDPNKSTEGLLEAIQMA WLDEVR >gi|333032594|gb|GL891832.1| GENE 207 225210 - 225641 674 143 aa, chain + ## HITS:1 COG:PA3807 KEGG:ns NR:ns ## COG: PA3807 COG0105 # Protein_GI_number: 15599002 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside diphosphate kinase # Organism: Pseudomonas aeruginosa # 1 143 1 143 143 196 73.0 1e-50 MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFF GDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSD SVASAEREIAYFFADNEICPRTR >gi|333032594|gb|GL891832.1| GENE 208 225764 - 226996 1231 410 aa, chain + ## HITS:1 COG:PA3806 KEGG:ns NR:ns ## COG: PA3806 COG0820 # Protein_GI_number: 15599001 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Pseudomonas aeruginosa # 24 403 3 368 379 485 62.0 1e-137 MSSAVVVSSENLDGQQQSSSTPASPAAEKVNLLGMSRAELEKFFEDIGEKKFRAGQVMKW IHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVE TVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANYSYME EVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGVVPKI DQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARKHVTI EYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKTLSDA GFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG >gi|333032594|gb|GL891832.1| GENE 209 227036 - 227812 901 258 aa, chain + ## HITS:1 COG:PA3805 KEGG:ns NR:ns ## COG: PA3805 COG3063 # Protein_GI_number: 15599000 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilF # Organism: Pseudomonas aeruginosa # 11 246 19 248 252 110 31.0 3e-24 MLCMGVAVALLTSGCQTSQTVKKDPEKAVKVRTQLAAEYIRSGDLDSAKRSLDQALSVDS RDATANMMMGILLQQEGSKPNLEKAEHYFKRAISSEPDNAQARNNYGTYLYQMERYNDAI EQFRIAGATLGYDQRYQALENLGRIYLKLGDIASAEKTFKQALLANRDSYISMLELAEIF YLQQQIPAATQMYEQYVRTVGQKNQGARALWIGLRVARANADKMGMQVLVNQLRALFPES PEYQRYLQLQYSTEAVWK >gi|333032594|gb|GL891832.1| GENE 210 227803 - 228594 809 263 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00510 NR:ns ## KEGG: ACICU_00510 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 263 1 263 263 487 100.0 1e-136 MEINPNSQQPTGSSLPTSALGNIQRPGEYLRQIRVSQKKELEQVSSDLNMPLKTLNALEQ DDYKSLPEATFIKGYYRSYAKYLNTDATAIIQRFDEIYANDTGLLPNHALNNSPIKIMGK LPGSNSDRNKKWLKRALLAILIIAVVSLIVMGVQKWTSNKGDAELPKANQSNVEVLPMKG NTSATAGDQLVLNFNRPTSVHIVDATGKVLATGRQASTLTLNGESPFQIRLDDATAVSLS LNQEQISLSPYTVNGKAEFRLSR >gi|333032594|gb|GL891832.1| GENE 211 228616 - 229731 1421 371 aa, chain + ## HITS:1 COG:PA3803 KEGG:ns NR:ns ## COG: PA3803 COG0821 # Protein_GI_number: 15598998 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Pseudomonas aeruginosa # 4 353 7 355 371 478 70.0 1e-134 MIENPIKRRPTRKIRVGSVYVGGDAPISVQSMTNTETCDVDATVAQIERCVDAGADIMRV SVPSMEAAEAFGAIRKRVSVPLVADIHFDHRIALAVADYGADCLRINPGNIGSDQKVREV VAAARHHGISMRIGVNAGSLEKDLQKKYGEPTGQALLESALRHIDILDRLDFHEFKVSVK ASNVFLTMDAYRLLSQQIDNPLHLGVTEAGIYRTGTVKSAIALGGLLMEGIGDTMRISLA AEPEDEIKIGFDILKSLGLRSNGINFIACPSCSRQEFNVIQVMQALEERLEDIRTPMDVS VIGCKVNGPGEAKEADIGVVGAAPRSLVYRNGEKSHLIDTNQLVDEIETMVRQRVQELEE AKSKEIIRSSS >gi|333032594|gb|GL891832.1| GENE 212 229728 - 231020 1444 430 aa, chain + ## HITS:1 COG:VC0760 KEGG:ns NR:ns ## COG: VC0760 COG0124 # Protein_GI_number: 15640779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Vibrio cholerae # 3 424 4 418 422 455 53.0 1e-128 MSSIVAIKGFNDVLPTQTAAWRRLEQHLASLMDAYGYQQIRLPIVEQTGLFKRAIGDATD IVEKEMYTFFDKGNPPESLTLRPEGTAGCVRALVEHNLLRGATPRVWYMGPMFRYEKPQK GRYRQFHQFGVETFGVATPDIEAEVILMTARLWKRMGVAHMVQLELNTLGEKEERTEYRN ALVAFLNEHKDALDEDSQRRLTTNPLRILDSKIESTQKILENAPKLYDFLKEDSLSHFQQ LQDYLTAAGIKFVINQKLVRGLDYYNKTVFEWTTTALGSQGTVCGGGRYDGLVGQLKGKA DQSVPAVGFGMGMERLLLLIEQVEQAEIVRDCEAFLVAEPAYQSKALVLAEQLRDQLEAA NSNIRIKTGSQGSMKSQMKKADQAGAVYAIILGEREWEAQQLAVKELATAEQSQVALAEL VPFLIEKFTK >gi|333032594|gb|GL891832.1| GENE 213 231049 - 231747 883 232 aa, chain + ## HITS:1 COG:PA3801 KEGG:ns NR:ns ## COG: PA3801 COG2976 # Protein_GI_number: 15598996 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 2 211 3 209 214 84 33.0 2e-16 MSLSDEEQFDSLKSFAKKYGSAMISGILIALIAFFGWEYWQKRNLATSQTETAKVQQLMD EANATADNPNALASITASADKIVKDDIDSVQAIQTQFVLAKLAYEKQDYAAAEKALKKVE NSKVKDEGLIQVVKLRLADAQLAQNKYDEALKTLSGDVDPAFKATVEELRGDIFVAKKDI DSAKKAYQAAWDSLLERKQERQILQIKLESVGVLVEDPQIERPILETQVEES >gi|333032594|gb|GL891832.1| GENE 214 231747 - 232892 1335 381 aa, chain + ## HITS:1 COG:PA3800 KEGG:ns NR:ns ## COG: PA3800 COG1520 # Protein_GI_number: 15598995 # Func_class: S Function unknown # Function: FOG: WD40-like repeat # Organism: Pseudomonas aeruginosa # 18 381 16 380 380 158 31.0 2e-38 MNQKFKLPLAIAIASAVLVGCSSNKVKEAKPNPLPKLTESNKSLVPVFSRSVSSTNKADP LRLQLDASEGVVFTLDPKGEVAAYRGKQRLWEKKVSKLGLSSGVEAAEGIVVVGNSKGQL FALDQATGEQKWTAQLSGALLSPSLVQSGRVITIANDGTVFAHDVSSGQQVWAYKLPNVQ FSLRGQPSPVSLDPRTVLIASANAYVYAIDTISGIPRFQRRVAVSEGRSDIQRLIDIDGD PVVAGQLMVTTSFQGQVTVTDLASQRVVWSEDSSSTKRPEVYDNKVFVSSTDGKLTAYDL TTGEQLWQNDSLLNRHLSNPVVLGSDLIVGDLDGVLHLIDPTTGKLIGRSKTSGEVNTLR VIENQLYVSTRKGDLSIWQNR >gi|333032594|gb|GL891832.1| GENE 215 233080 - 234489 1740 469 aa, chain + ## HITS:1 COG:PA3799 KEGG:ns NR:ns ## COG: PA3799 COG1160 # Protein_GI_number: 15598994 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Pseudomonas aeruginosa # 1 457 1 478 493 541 56.0 1e-154 MKPVIALIGRPNVGKSTLFNQITKSRDALVADFAGLTRDRKYGDATYQNKSFIVVDTGGI GESEGGIDNYMAEQSKTAINEADIIIFVVDARAGLLASDEQIARELRTLGKKIYLVANKV DGVHAEAALVEFYKLGMGEPLQVAASHGRGVQQMLEDVLQDIPEDENPEEHDKDTGLRLA IIGRPNVGKSTLVNRLLGEDRVVAFDQPGTTRDSIYIPFEREGRKYTLIDTAGVRRKGKV DEMIEKFSIVKTLQAMKDAHVVVVVVDAREGIVEQDLHLIGYALEAGRAMVIAINKWDNM SEYDRKQCKLDVERRFDFIPWARIHLISALHGTGVGELYPSIHRAYESANLKVSPAKLTQ ILNDATDQHQPPTVQGRRIKMRYAHMGGQNPPTIVIHGNKVDKTPADYRRYLENVFRKVY KLEGTPVKIEFKTSENPFEGRKSQVDERTAARRRRYIQKFKKAEKKFKR >gi|333032594|gb|GL891832.1| GENE 216 234686 - 235300 544 204 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00517 NR:ns ## KEGG: ACICU_00517 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 204 1 204 204 388 100.0 1e-107 MVTLHLAHLTLTHAQPSYAALECIPAMQRRRLSPLAKLALNTAISSLDGRSADYIVWVSK YGDEAKTLNILQDVLNDQTPSPTQFSTSVHNAISGLYSILCQDDTPSTSLSCSWTEGLIE AYALLKSMPEIKRVLVVAYDEPLPNIYAEAINFPAYAMAAVVTLEQPNLQITAWTHTDEA DAPAFAHFWQDADQLTSAFGWNKC >gi|333032594|gb|GL891832.1| GENE 217 235294 - 236088 706 264 aa, chain + ## HITS:1 COG:RSp0371 KEGG:ns NR:ns ## COG: RSp0371 COG0204 # Protein_GI_number: 17548592 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Ralstonia solanacearum # 7 234 5 229 268 165 37.0 1e-40 MLNLKNLKQKSNYCWRVAATGFSFASFGLGGIAIASVIAPVLNATTSDPQKRQQRAQNVI KHSFKGFTDMMVKLGIMTYSVEGLEKLQNSRQELVIANHPTLIDVVVLIGMMQQANCVVK QSLWSNPFTKGPVQSAGYILNAGSQQFVEDCVKRLKENNAASLLIFPEGTRTEKGMTLNE FQRGAANIAIRANVPIRPVIITCTPSTLTKNEKWYHVPSQPFHIEVKVLDAVQVSDLLDD LTVGPKQVRQLSRSFYKIFDEELS >gi|333032594|gb|GL891832.1| GENE 218 236090 - 236350 334 86 aa, chain + ## HITS:1 COG:ECs4328 KEGG:ns NR:ns ## COG: ECs4328 COG0236 # Protein_GI_number: 15833582 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Escherichia coli O157:H7 # 1 84 1 84 85 85 57.0 3e-17 MSNLADELKQMIIDVLALEDITIADIDTEAPLFGEGLGLDSIDALELGLALKKRYNIHLN AESDETKQHFKSIQSLVALVEAQQKS >gi|333032594|gb|GL891832.1| GENE 219 236362 - 236610 433 82 aa, chain + ## HITS:1 COG:RSp0369 KEGG:ns NR:ns ## COG: RSp0369 COG0236 # Protein_GI_number: 17548590 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl carrier protein # Organism: Ralstonia solanacearum # 2 81 1 80 81 71 42.0 4e-13 MLSQEQVLTKLREWMEDLFEIEPETVQLDSNLYSDLDVDSIDAVDLVVKIKELTGKQVKP EDFKNVRTVLDVVTVIQNMTAE >gi|333032594|gb|GL891832.1| GENE 220 236631 - 237161 284 176 aa, chain + ## HITS:1 COG:RSp0368 KEGG:ns NR:ns ## COG: RSp0368 COG4648 # Protein_GI_number: 17548589 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 4 174 20 200 205 104 38.0 7e-23 MTALFVLYPFIVGWSLSHGQFVWVSALLIGLGVIRLFSKGNSLLWPLTGFAIVCGSLSLL SHDHAWLKLYPVGMSLGALIIFALTLIKPPSMIERFARLVEPDLPASGVQWTRQVTKVWC VFFFCNALIALSTVLFTSTQVWVIYNGFISYVLMGILFLGEFILRKRHQRLHSSNH Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:35:43 2011 Seq name: gi|333032593|gb|GL891833.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld29, whole genome shotgun sequence Length of sequence - 14035 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 5, operones - 4 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 158 - 217 8.3 1 1 Op 1 11/0.000 + CDS 262 - 1710 1330 ## COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog + Term 1784 - 1852 2.1 + Prom 1738 - 1797 4.8 2 1 Op 2 . + CDS 1879 - 2217 222 ## PROTEIN SUPPORTED gi|148652165|ref|YP_001279258.1| sigma 54 modulation protein/ribosomal protein S30EA + Term 2234 - 2273 2.7 + Prom 2223 - 2282 7.8 3 2 Op 1 11/0.000 + CDS 2357 - 2608 374 ## COG5007 Predicted transcriptional regulator, BolA superfamily 4 2 Op 2 1/0.000 + CDS 2615 - 3871 1611 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 5 2 Op 3 18/0.000 + CDS 3871 - 4554 734 ## COG0040 ATP phosphoribosyltransferase + Term 4613 - 4656 5.4 + Prom 4575 - 4634 3.0 6 2 Op 4 19/0.000 + CDS 4660 - 5949 1604 ## COG0141 Histidinol dehydrogenase + Term 5985 - 6013 2.3 7 2 Op 5 . + CDS 6019 - 7104 971 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase + Term 7111 - 7161 5.1 8 3 Tu 1 . - CDS 7108 - 8496 1015 ## COG0147 Anthranilate/para-aminobenzoate synthases component I - Prom 8552 - 8611 5.0 + Prom 8732 - 8791 3.1 9 4 Op 1 . + CDS 8815 - 9663 1260 ## ABAYE3128 pilus subunit (FilA) + Term 9674 - 9717 5.6 10 4 Op 2 . + CDS 9730 - 9801 70 ## + Prom 9872 - 9931 3.4 11 5 Op 1 1/0.000 + CDS 9994 - 10395 299 ## COG3271 Predicted double-glycine peptidase 12 5 Op 2 . + CDS 10405 - 10797 300 ## COG3271 Predicted double-glycine peptidase 13 5 Op 3 . + CDS 10863 - 12023 1330 ## ACICU_00637 pilus assembly protein 14 5 Op 4 . + CDS 12036 - 13700 1601 ## COG2067 Long-chain fatty acid transport protein 15 5 Op 5 . + CDS 13694 - 14033 194 ## ACICU_00639 FilE Predicted protein(s) >gi|333032593|gb|GL891833.1| GENE 1 262 - 1710 1330 482 aa, chain + ## HITS:1 COG:PA4462 KEGG:ns NR:ns ## COG: PA4462 COG1508 # Protein_GI_number: 15599658 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog # Organism: Pseudomonas aeruginosa # 1 482 1 497 497 432 50.0 1e-121 MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLS TLEHKETDDLTTELNADHLPDDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKE HILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEIILAVQHLLSEMDIDEEVEEDE VLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMP KLRINSFYSSMIRRADQSDDNLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFL EIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRGLFELKYFFSSHVGTTTGGEA SSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV LI >gi|333032593|gb|GL891833.1| GENE 2 1879 - 2217 222 112 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148652165|ref|YP_001279258.1| sigma 54 modulation protein/ribosomal protein S30EA [Psychrobacter sp. PRwf-1] # 1 99 1 99 132 90 39 8e-18 MQITIRGHHLAITPAIEENIKAKFNQLTKHLDQVNSMQIKLTKDHQIDKRSHKGSSNHVA EAIVRLPGIELFAQATADDMYTSIKKLTEKLKKQLLKYRKMQCTYSQVAVSI >gi|333032593|gb|GL891833.1| GENE 3 2357 - 2608 374 83 aa, chain + ## HITS:1 COG:PA4451 KEGG:ns NR:ns ## COG: PA4451 COG5007 # Protein_GI_number: 15599647 # Func_class: K Transcription # Function: Predicted transcriptional regulator, BolA superfamily # Organism: Pseudomonas aeruginosa # 1 79 1 79 79 63 37.0 9e-11 MNSEQLTQILKEAFPEAEVVVSGQAGKFDLRIVDDQFEGKRTVARQQAVYAPLNTYIASG EVHAVTIRAMTKDEWRKASLFGA >gi|333032593|gb|GL891833.1| GENE 4 2615 - 3871 1611 418 aa, chain + ## HITS:1 COG:PA4450 KEGG:ns NR:ns ## COG: PA4450 COG0766 # Protein_GI_number: 15599646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Pseudomonas aeruginosa # 1 417 1 419 421 513 63.0 1e-145 MDKFLITGGVKLEGEVRISGAKNAALPLLAAMILADSPITLTNVPNLKDVNTLVKLIGGL GVTISYENDTVKADTSTLDNQFAPYELVKTMRASILVLGPLLARYGNAKVSLPGGCAIGS RPVDQHLKALEALGAHIEVENGYVHATVDGRLKGGEVVFDMVTVGGTENILMAAALADGV TTIRNAAREPEITDLAQMLIKMGAKIEGLDTDTLVVTGVESLHGCEYAVVADRIETGSYL AAAAITGGRVKTTHTDPSLLEAVLDKFEEMGAEVTRGDDWIELDMLGKRPKAVSFRTLPH PEFPTDMQAQIMAVNAIGRGFATISETIFENRFMHVPELSRMGANIQVEGHDAVVTGVEK LQAAPVMATDLRASFSLVLAALVAEGDTLIDRIYHIDRGYEHVEEKLQGLGAKIKRVS >gi|333032593|gb|GL891833.1| GENE 5 3871 - 4554 734 227 aa, chain + ## HITS:1 COG:PA4449 KEGG:ns NR:ns ## COG: PA4449 COG0040 # Protein_GI_number: 15599645 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Pseudomonas aeruginosa # 21 227 2 208 211 273 68.0 1e-73 MNDVRNDDPNFNVMGNFDHGLTLALSKGRILKETLPLLATAGINLLEDPEKSRKLIFPTT HKQVRILILRASDVPTYVENGAADLGVAGKDVLMEHGAQHVYELLDLQIAKCKLMTAGKV GMERPKGRLKIATKYVNLTRQYYASLGEQVDVIKLYGSMELAPLVGLGDYIVDVVDTGNT LRANGLEPLEEICKVSSRLIVNKASFKRKQVLLNPIISQLEQAVQSR >gi|333032593|gb|GL891833.1| GENE 6 4660 - 5949 1604 429 aa, chain + ## HITS:1 COG:PA4448 KEGG:ns NR:ns ## COG: PA4448 COG0141 # Protein_GI_number: 15599644 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Pseudomonas aeruginosa # 1 427 7 433 440 505 61.0 1e-143 MRRLSTQDQNFKQVFAELLAFETVNDPNLVQTVDQIIADVRQHGDDHVLKLTQQFDRHPA HQFSDLELSQQQLKAAFDGLNQEIREALKLAADRIRTFHEAQKQDSWTYVDDLGNTLGQK VTPLDRVGIYVPGGLASYPSSVLMNAVPAHVAGVPEIIMVVPAPNGELNPLVLAAAYLAG VSRVFTIGGAQAVAALAYGTQTVPRVDKITGPGNRFVAAAKRAVFGQVGIDMIAGPSEIL VYAEGVNNAEWLAMDVLSQAEHDTVAQAIFITPDEALLEAVESAIEKHLNELPKAEIART SIKNRGALVLVKDRAEAVDLINQVAPEHLELCLDDAEAMSQDIRHAGAIFMGRYTPEAIG DYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLIMCSKDGVKTLAKTADVLAVQENLDAH ARSARYRYQ >gi|333032593|gb|GL891833.1| GENE 7 6019 - 7104 971 361 aa, chain + ## HITS:1 COG:PA4447 KEGG:ns NR:ns ## COG: PA4447 COG0079 # Protein_GI_number: 15599643 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Pseudomonas aeruginosa # 9 356 3 347 351 427 61.0 1e-119 MTVSTAQMRFWSPEVRELEPYVPGEQPKIQNLLKLNTNENPYPPSPKVVEAVQEVLHEQA DVLRLYPDPDATVLKQAIAKQQNIDVSQVFVGNGSDEVLAHIFKAFFLQDGPILYPDITY SFYPVYSQFFGTKTKEIPLNENFEIDVRDYTQPNGGVIITNPNAPTSIALSLAEIEQVLQ ANPDRVVVIDEAYVDFGAESAVSLINRYENLVVCQTTSKSRSLAGLRVGFAIAQSHLIAA LEAVKNSFNSYPIDRFAIAAAVASFEDQAYFEEQCQKVITSREKLVRDLTELGFNVLPSK ANFIFATHSQHDAGQLAQKLREQGIIVRYFNKPRINQFLRITVGTNEQNARLVQTLKQDI L >gi|333032593|gb|GL891833.1| GENE 8 7108 - 8496 1015 462 aa, chain - ## HITS:1 COG:VC1303 KEGG:ns NR:ns ## COG: VC1303 COG0147 # Protein_GI_number: 15641316 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Vibrio cholerae # 93 459 90 458 458 272 40.0 9e-73 MPPLPNSHMFKMSHLKKKISLESYYSAADILKKLEELTGLVYLQDDNNPVIGFLPKNYLI TQNNQNFLFTKTDLNKYKFSSYIENLLDFTQFQSQELKNSNREKISFKGGYIGFISYDFS AHQFINNQSHKQPSLFIGSYYSFIKKINNEWYFFSDENNAFEIFNYLSDLLNKPANKLQK NNFKLEQNIHPRWSKNTYLTAFHKIQEYIKAGDCYQINLTQEFKANFTGSLLNKADELWN LTNAPYSGYLKLTEFELLSCSPELFIEFNVNKQIKTRPIKGTMPRYENKEQDLLSKQTLK NSKKDQAENVMIVDLLRNDLSIYANTGSVKTTKLFEIESFNQVHHMVSEITATLKNDINP MQMLLTALPGGSITGAPKIRAMQIIEELEGAPRGAYCGTLGYFNFDGTGRWNILIRSFQQ YQNQLSIWAGGGITIASEAEAEYQESLDKISAMLNLMNSTAE >gi|333032593|gb|GL891833.1| GENE 9 8815 - 9663 1260 282 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3128 NR:ns ## KEGG: ABAYE3128 # Name: not_defined # Def: pilus subunit (FilA) # Organism: A.baumannii_AYE # Pathway: not_defined # 1 282 1 282 282 375 100.0 1e-102 MKMFTKLALVSSLAISANAMAMQSMDDAALSAATGQDGINIGIALGSGGITIDKLYLHDN DGLATSTGITGASGTAGAIAISGVTVTQKGTGNLLDLAIDTNGASGSNGAFLNVAATVGA VDVHVGSIGVGTSGTLNQTTAVRGITETAPTEIISGLDLSLGQISANVQLGSTPQGAMIK VNSSLQGGLTLSNFGINDAAGGGKIVLDKVMVRGAGNTTGDLDVNADISVVPTGLRIQNN STQGMNVYAQGVHLGAAGNASIGDLEIQGLNVGKSTITISGH >gi|333032593|gb|GL891833.1| GENE 10 9730 - 9801 70 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFCLNNISLYNRKEYKTFENEN >gi|333032593|gb|GL891833.1| GENE 11 9994 - 10395 299 133 aa, chain + ## HITS:1 COG:PA1762 KEGG:ns NR:ns ## COG: PA1762 COG3271 # Protein_GI_number: 15596959 # Func_class: R General function prediction only # Function: Predicted double-glycine peptidase # Organism: Pseudomonas aeruginosa # 6 129 16 134 253 128 51.0 3e-30 MYYFATEAFEIEKKPPGTVYYTETADSRNLSFHRNHIEPVTIKPAVEDQFRGIVRQAYDY SCGSAALTTLLNGYVGTSLTEQQTMSGLLQYGEYQRIIERRSFSLLDMKRFVTAIGLESG GYRGEFSDLVKLG >gi|333032593|gb|GL891833.1| GENE 12 10405 - 10797 300 130 aa, chain + ## HITS:1 COG:PA1762 KEGG:ns NR:ns ## COG: PA1762 COG3271 # Protein_GI_number: 15596959 # Func_class: R General function prediction only # Function: Predicted double-glycine peptidase # Organism: Pseudomonas aeruginosa # 1 91 143 231 253 95 53.0 2e-20 MPISYAGFKHFVVYKAYKDGRVYVADPALGNISFDEGRFKEIWDNNTLFVISVPASQRKD LLALKDADMRHVEDATVNRYAFVDVQYPAFNYDRLANKASTMRRVLDNDNHSATYGQPIE TYMRLYYKRK >gi|333032593|gb|GL891833.1| GENE 13 10863 - 12023 1330 386 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00637 NR:ns ## KEGG: ACICU_00637 # Name: filC # Def: pilus assembly protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 386 1 386 386 664 100.0 0 MSVLALSMSAITGTIYAEDQVQSTQVSDSNQSVEANENSGASDTASSSEATTDSTTQTSN VSETNNVVPASNSEAHQAASALQKKEGDASQETNLQEVFTSNERQYSLIKKGVISSYYDL DYTYYRDTRIDLALSDNSSQLNRLRVEEDANHTLTNSFTLQYGVLDNLTLSATLPFVAKS EIIRDTTTAGLGDISFGARWEPFPLKQGRLPLVLFGSLSTKTGDSPYEIGLDELSTGKGY YSVGVGASTRKYIDPVVLFASASANYGFKESGLNQARGSRTLTSFDPGISGGFSFGFAYS FNYDVSLTMSYQQSFNMDAEFQFENGESYKSPDQSSAMLSFALGVRVSPETIVNGTVGIG LTEDAPDISLGLSFPLDILGFNKKQK >gi|333032593|gb|GL891833.1| GENE 14 12036 - 13700 1601 554 aa, chain + ## HITS:1 COG:PA1764 KEGG:ns NR:ns ## COG: PA1764 COG2067 # Protein_GI_number: 15596961 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Pseudomonas aeruginosa # 22 554 23 532 532 404 39.0 1e-112 MKYPKLCPLTAAIVISGFSSFANAQLGQNLAVDIRSLSMGNAVTADPPGISAVHFNPAAL AKIDGLQTDVQGILANFDIQREFSAPPGYNIFGYSDDPLVCNDGPEVSANICTDFKGSVH GDVEYASLYVPILKKMVDLGAGYPLVAPTAGIAYKPPGSKVTYATAMYAPLVAGFGAENG NPGNYMGQQVAVERITYLSPSFGYQVNDHLSIGASVGMSYNAIALKTDLRFPNEMIGVLR MVDDVVCAPFKDNNDMITDLLLLGICNAKEGMNPFNKMGALQVSLEQSLSPSYNLGLLWE PTDDFGFGMVYQSAAKMRLKGKYMIDNAKAPQELVRGLNSSATGQILAAILGLPGYVPDI ESGLVAMDLEYPAHFQAGIKYKILPDLQLNLDVGWTDYSAWNKFKFEFDRQITLLKVAKL LSNDVTDNSLALPLKFTSPWSWGIGLEYSATDRLKLRAGYEPRASSIPNDKRNTMVPINN AQLFGLGVGYRFDADTDLDLSVGFLRSRDNIPACTSTLSNKCGVDNILLNPYSGLDVKTN TKVTVLGLSYRTKW >gi|333032593|gb|GL891833.1| GENE 15 13694 - 14033 194 113 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00639 NR:ns ## KEGG: ACICU_00639 # Name: filE # Def: FilE # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 104 1 104 419 181 100.0 1e-44 MVKQYKGIFRPKVAITTLCVAIASISVSYADGFYTIIGPDGRPMIVPSKRIDQKKQPIPK IEERKPQTQQNPLIVDSVQKTSKEKEQIKNSPKKLEQHVQEKLNTAPTAPTAP Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:36:15 2011 Seq name: gi|333032592|gb|GL891834.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld30, whole genome shotgun sequence Length of sequence - 50092 bp Number of predicted genes - 48, with homology - 48 Number of transcription units - 30, operones - 11 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 63 - 102 0.3 1 1 Tu 1 . - CDS 248 - 805 482 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 876 - 935 4.0 - Term 900 - 935 3.5 2 2 Tu 1 . - CDS 949 - 2019 863 ## COG0657 Esterase/lipase - Prom 2072 - 2131 2.3 + Prom 1995 - 2054 4.7 3 3 Tu 1 . + CDS 2230 - 2556 525 ## ABBFA_003500 hypothetical protein + Term 2579 - 2617 1.6 - Term 2630 - 2663 -0.5 4 4 Tu 1 . - CDS 2730 - 2960 384 ## ABBFA_003501 hypothetical protein - Prom 3139 - 3198 6.2 - Term 3289 - 3318 2.1 5 5 Tu 1 . - CDS 3352 - 4218 1061 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Prom 4243 - 4302 5.9 6 6 Tu 1 . + CDS 4326 - 5219 708 ## COG0583 Transcriptional regulator 7 7 Op 1 29/0.000 + CDS 5383 - 5937 765 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Prom 5939 - 5998 8.0 8 7 Op 2 . + CDS 6091 - 8031 2479 ## COG0443 Molecular chaperone + Term 8042 - 8086 5.2 + Prom 8082 - 8141 8.3 9 8 Tu 1 . + CDS 8362 - 9279 766 ## ABBFA_003506 Matrixin family protein + Term 9347 - 9402 11.1 + Prom 9382 - 9441 10.6 10 9 Op 1 . + CDS 9466 - 10371 995 ## ABAYE3867 hypothetical protein + Term 10388 - 10435 9.6 + Prom 10395 - 10454 1.9 11 9 Op 2 . + CDS 10485 - 10859 505 ## ABBFA_003508 hypothetical protein + Term 10861 - 10920 15.1 - Term 10863 - 10892 2.1 12 10 Tu 1 . - CDS 10909 - 12201 1463 ## COG2951 Membrane-bound lytic murein transglycosylase B - Prom 12346 - 12405 4.1 - Term 12842 - 12869 0.1 13 11 Op 1 29/0.000 - CDS 12891 - 14012 1052 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 14 11 Op 2 . - CDS 14022 - 14534 745 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase - Prom 14605 - 14664 5.0 - Term 14554 - 14586 2.4 15 12 Tu 1 . - CDS 14718 - 15083 259 ## COG3169 Uncharacterized protein conserved in bacteria - Prom 15111 - 15170 6.9 16 13 Tu 1 . + CDS 15322 - 16695 1746 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 16717 - 16764 12.5 - Term 16711 - 16744 5.1 17 14 Tu 1 . - CDS 16766 - 18016 963 ## COG4292 Predicted membrane protein - Prom 18054 - 18113 4.1 + Prom 17903 - 17962 4.7 18 15 Tu 1 . + CDS 18152 - 18748 405 ## COG0671 Membrane-associated phospholipid phosphatase + Term 18979 - 19044 11.8 + Prom 19026 - 19085 3.8 19 16 Tu 1 . + CDS 19125 - 20024 772 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Term 20035 - 20074 8.2 + Prom 20125 - 20184 4.3 20 17 Op 1 . + CDS 20213 - 20578 269 ## ABAYE3882 signal peptide 21 17 Op 2 . + CDS 20600 - 21760 996 ## COG0754 Glutathionylspermidine synthase + Prom 21905 - 21964 6.3 22 18 Op 1 . + CDS 22051 - 23106 1014 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 23 18 Op 2 . + CDS 23163 - 24488 1212 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 24 18 Op 3 . + CDS 24451 - 24600 133 ## AB57_0032 hypothetical protein + Term 24644 - 24678 2.9 + Prom 24623 - 24682 7.6 25 19 Op 1 . + CDS 24703 - 25230 754 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase + Term 25245 - 25271 -1.0 + Prom 25232 - 25291 7.0 26 19 Op 2 . + CDS 25403 - 25654 397 ## COG2261 Predicted membrane protein + Term 25668 - 25714 11.1 - Term 25653 - 25704 10.1 27 20 Op 1 . - CDS 25707 - 26405 683 ## COG1651 Protein-disulfide isomerase - Prom 26429 - 26488 3.0 - Term 26426 - 26473 9.6 28 20 Op 2 . - CDS 26501 - 27469 984 ## COG1230 Co/Zn/Cd efflux system component - Prom 27501 - 27560 7.8 + Prom 27438 - 27497 6.0 29 21 Tu 1 . + CDS 27527 - 27790 239 ## COG1937 Uncharacterized protein conserved in bacteria + Term 27799 - 27840 0.5 - Term 27786 - 27828 8.3 30 22 Op 1 10/0.000 - CDS 27836 - 29191 1888 ## COG0486 Predicted GTPase - Term 29217 - 29258 8.1 31 22 Op 2 18/0.000 - CDS 29282 - 31042 1901 ## COG0706 Preprotein translocase subunit YidC 32 22 Op 3 16/0.000 - CDS 31048 - 31368 290 ## COG0759 Uncharacterized conserved protein 33 22 Op 4 . - CDS 31379 - 31771 193 ## COG0594 RNase P protein component 34 22 Op 5 . - CDS 31801 - 31989 312 ## PROTEIN SUPPORTED gi|126643005|ref|YP_001085989.1| 50S ribosomal protein L34 35 23 Op 1 16/0.000 + CDS 32606 - 34003 1625 ## COG0593 ATPase involved in DNA replication initiation 36 23 Op 2 18/0.000 + CDS 34101 - 35249 1347 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 37 23 Op 3 9/0.000 + CDS 35264 - 36346 880 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 38 23 Op 4 . + CDS 36399 - 38867 2671 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 39 23 Op 5 . + CDS 38908 - 39297 452 ## COG3783 Soluble cytochrome b562 + Term 39310 - 39368 9.3 - Term 39308 - 39348 7.7 40 24 Op 1 . - CDS 39383 - 39940 204 ## PROTEIN SUPPORTED gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 - Prom 40129 - 40188 6.0 - Term 40137 - 40182 -0.4 41 24 Op 2 . - CDS 40191 - 42122 1910 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Prom 42300 - 42359 7.0 + Prom 42259 - 42318 6.1 42 25 Tu 1 . + CDS 42375 - 43379 710 ## ABBFA_000008 hypothetical protein + Prom 43470 - 43529 6.7 43 26 Tu 1 . + CDS 43635 - 44642 1212 ## ABBFA_000009 hypothetical protein + Term 44661 - 44691 1.2 + Prom 44835 - 44894 7.0 44 27 Tu 1 . + CDS 44985 - 45989 1166 ## ABBFA_000010 hypothetical protein + Term 46033 - 46081 10.6 + Prom 46005 - 46064 6.5 45 28 Tu 1 . + CDS 46114 - 46449 362 ## COG0316 Uncharacterized conserved protein + Term 46457 - 46514 14.4 - Term 46445 - 46498 14.4 46 29 Op 1 . - CDS 46504 - 47349 540 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 47376 - 47435 8.3 47 29 Op 2 . - CDS 47477 - 48604 1233 ## COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases - Prom 48791 - 48850 5.0 + Prom 48584 - 48643 2.1 48 30 Tu 1 . + CDS 48666 - 49898 313 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Term 49915 - 49952 5.7 Predicted protein(s) >gi|333032592|gb|GL891834.1| GENE 1 248 - 805 482 185 aa, chain - ## HITS:1 COG:ECs4214 KEGG:ns NR:ns ## COG: ECs4214 COG0652 # Protein_GI_number: 15833468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Escherichia coli O157:H7 # 1 180 9 188 190 197 56.0 1e-50 MKKLLMLLCLGVSSHSVWANTLVEMQTNLGNIEIELYDDKAPMSVNNFKGYIKSGFYKET IFHRVIPGFMAQGGGMTANMQEKTTRAPIKNEAGNGIANTRGTLAMARTSNPDSATSQFF INVADNNFLNRSPGNPGYAVFGKVVKGMDVVDRIVQAPTSNYGMHQNVPKQPIKIVDIKI KNSQK >gi|333032592|gb|GL891834.1| GENE 2 949 - 2019 863 356 aa, chain - ## HITS:1 COG:Rv2970c KEGG:ns NR:ns ## COG: Rv2970c COG0657 # Protein_GI_number: 15610107 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Mycobacterium tuberculosis H37Rv # 47 330 61 351 376 179 37.0 7e-45 MTAFNQKIQTLLDKGQGPAARALDRLPRLAQESLAKILGYSYQYPDLDSFTKCMMAVQIK QGRVGFIGSDPIESRRAFDAQMQAIRQKPTDIELVEDIRLPLQSGTIFARHYHPAPNKKL PLIVFYHGGGFVVGGLDTHDEVCRLLAKYAKVQVLSIDYPLAPEVSPQHLIQSCEDALAW VYQNRRQLKILKSRIAVAGDSAGGNISTVVAQRSVNKAYAPQAQLLIYPTVDFKSRHPSF YAYNEGLVLTNTDIDYVTQYYATHHNVELDDPIISPTYGNLKKNPPAFVITAGHDVLHDE AKIYSHKLRQNGVKMHYEEFPDQTHGFINLTPISRKAKRYTIEISKNFRKFWDKNS >gi|333032592|gb|GL891834.1| GENE 3 2230 - 2556 525 108 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003500 NR:ns ## KEGG: ABBFA_003500 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 108 1 108 108 115 99.0 7e-25 MSAKLVITLLATSLLTVGCVAYTDDPYYRGGYGYHDHDDDRYDRNDGRRYSEWERKRWEE RKRLYEQQRKDIREQQKDRREWEKRHREWEKKRLEDRDHDHRDYRHDD >gi|333032592|gb|GL891834.1| GENE 4 2730 - 2960 384 76 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003501 NR:ns ## KEGG: ABBFA_003501 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 76 1 76 76 78 100.0 7e-14 MKKLGLISVVLAGVAFTAVGCASEAGLNASGSAQTSASPSGVQAGVGVDAGVSGQAQPGQ VDAGASGSVSGSATAQ >gi|333032592|gb|GL891834.1| GENE 5 3352 - 4218 1061 288 aa, chain - ## HITS:1 COG:PA0057 KEGG:ns NR:ns ## COG: PA0057 COG0491 # Protein_GI_number: 15595255 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pseudomonas aeruginosa # 40 288 43 295 295 228 45.0 8e-60 MKLFKLSASALATATALTMAQTAFAQDLKIQSFLAKPEHFGVTSTLIEGDKEVLLVNAQF SKSEALRIAANILDSGKTLKTIFVSYGDPDYYFGLDVFKQYFPNVQIIATPETVKHIQDT QALKVKYWGPQMGANAPSQIIVPQAYTAKTLKLENESIEIKGKKELTYLWVPSAKAVVGG IPVSSGIHLWMADTPKTKDRVEVIQSLESIKALQPKIVVPAHMVEGAPQGLDAVNFSINY LNSYEKAAKATKNATELSKLMQKQYPTLQSVDSLELGAKVVKGEMQWP >gi|333032592|gb|GL891834.1| GENE 6 4326 - 5219 708 297 aa, chain + ## HITS:1 COG:VCA1055 KEGG:ns NR:ns ## COG: VCA1055 COG0583 # Protein_GI_number: 15601806 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 1 287 12 298 307 168 35.0 1e-41 MDTLKAIQVFVSIAQHGNLTKAAEHLNYSRAMVSRYLEHLEHTFSTRLFQRNTRKISLTP AGEKALLYCENILQQQQLLQELAAPEQHNGTIRFTCGLFLFELGVAECIRQFKRQHPHIQ FDVYLTESTMDLIDAQVDLALRITQKVADGLIARPVCQIESVFCAHPDYLKQHSPLLHPR QLIQHECIAHHSQHQFWTLFDNEQQPQNYPLNVTFKSNDVNALYDMCLHAQGVAMLPTLL VEKDLKEKRLKALFKNFTAPELSLSVVYASRQHLPRITQEFIAFMIENLDFYLKPQN >gi|333032592|gb|GL891834.1| GENE 7 5383 - 5937 765 184 aa, chain + ## HITS:1 COG:HI0071 KEGG:ns NR:ns ## COG: HI0071 COG0576 # Protein_GI_number: 16272046 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Haemophilus influenzae # 37 183 72 233 234 90 40.0 1e-18 MANEQNEQAQDIQNEQVEQSNEQTQAEGVEQANDVTVESLQAQITKLEENLKLEKARTAN AVYEAQKSVERIQRESEKHKETVLEKFAKELLDSVDNLERAIQAAGDEETPVLEGVKLTL KSLLTTLEKFGVVEADTQNGFNADLHQAVGIDPNAKANEIGTVLQKGYTLNGRLLRPAMV MVGQ >gi|333032592|gb|GL891834.1| GENE 8 6091 - 8031 2479 646 aa, chain + ## HITS:1 COG:PA4761 KEGG:ns NR:ns ## COG: PA4761 COG0443 # Protein_GI_number: 15599955 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Pseudomonas aeruginosa # 1 645 1 637 637 817 72.0 0 MAKIIGIDLGTTNSCVAVLEGDKVKVIENAEGARTTPSIIAYKDGEILVGQSAKRQAVTN PKNTLFAIKRLIGRRYEDQAVQKDIGLVPYKIIKADNGDAWVEVNDKKLAPQQISAEILK KMKKTAEDYLGETVTEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAFGM DKKEGDRKVAVYDLGGGTFDVSIIEIADLDGDQQIEVLSTNGDTFLGGEDFDNALIEYLV EEFKKEQNVNLKNDPLALQRLKEAAEKAKIELSSSNATEINLPYITADATGPKHLVINVT RAKLEGLVADLVARTIEPCKIALKDAGLSTSDISDVILVGGQSRMPLVQQKVQEFFGREP RKDVNPDEAVAIGAAIQGAVLSGDKNDVLLLDVTPLTLGIETMGGVLTPIIEKNTTIPAK KSQVFSTAADNQPAVDISVYQGERKMAQQNKLLGNFQLGDIPPAPRGVPQIEVSFDINAD GILKVSAKDKSTGKEQSIQIKANSGLSDAEIEAMIKDAEANAEEDRKFEELAKARNEADA LISSSNKAVKDLGDKVTEDEKTAVNTAVSELEAATKENDVEAIKAKTEALQNILMPITQR AYEQAQQAGGAEGFDPNAFQGGDAGQQKADDGVVDAEFTEVKDDKK >gi|333032592|gb|GL891834.1| GENE 9 8362 - 9279 766 305 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003506 NR:ns ## KEGG: ABBFA_003506 # Name: not_defined # Def: Matrixin family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 305 1 305 305 480 98.0 1e-134 MKKFLWWGISLYFSISLQVAAFAQSNLSNISFNQPLKYRIDYIDPRFELTKEQFIQIGKE AAEIWQKETGKTYFIYDSQAELTINLVLDNQQATQNERKNSINELLKQQEEWREKNKAIL LFKQQIDQETSLLNKEKENLNYKFEQYQKDVSLFNQGNYGQFTQSSLNKRQAELSQLSLE LQTKFSQHSNKIEMLNRQIKQINQQQSLLNQSIEQFNLSTTSGSKTFHKGLFSQNQIQIY GFTSFDDLRLTLAHEFGHALGLKHTDDPKSLMYPLLREQDIHNFKLTNSDLDLLATLYGS NDENH >gi|333032592|gb|GL891834.1| GENE 10 9466 - 10371 995 301 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3867 NR:ns ## KEGG: ABAYE3867 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 301 36 336 336 492 100.0 1e-138 MRLTSLLLGMAFAFSNFQANANLATPLHTQVQQKNVQHLTYKIAEVDPRFGLSQEQLIQI TQQAADIWKEGTGKNYFTYDPNAKLEIRLVYDDSQNRSAERQKIASQFKQDQQRVIDEQQ QIKQLKQNLSQTQSDLENKKQILNEKLKNFDQQMMQFKEGKLAPEYTAKSLSKTQKDLQK QTVALKKDIAAYNQQAADLNKKVTHFNQINDEFNQSLNQFKQNAQADVFKKGIYNGKQIM IYEYSSIDDLRLTIAHELGHALGLKHSDQPGALMYSVRKDSDKKSNILTDADRDLLSALP Q >gi|333032592|gb|GL891834.1| GENE 11 10485 - 10859 505 124 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003508 NR:ns ## KEGG: ABBFA_003508 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 124 1 124 124 178 100.0 8e-44 MSYYHILIEVNDHISTIEQTRDIELFDIIELKPYLHSILLPYFNEQEIELEDENIEYKDI LHLEVKQTLLPIEHLIEEEQKQLPSDTDVTITAYEIFNDRDLSQDVTSVIFDILEAVKLD QSIV >gi|333032592|gb|GL891834.1| GENE 12 10909 - 12201 1463 430 aa, chain - ## HITS:1 COG:PA1171 KEGG:ns NR:ns ## COG: PA1171 COG2951 # Protein_GI_number: 15596368 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Pseudomonas aeruginosa # 47 424 23 397 398 453 60.0 1e-127 MRRFSCIVGSVFLAMTQAQAELVINGSTISSNATVPVTNSDTYTPNNNFQSCLANLRSQA IAAGVSGSTYDRYTQNLTPDYSVIDKLNYQPEFSTPIWDYLSGLVDEERVALGKQKLAQH RDVLNRASQVYGVPAETIVAVWGVESNFGDISGKYPLLQALGTLSCEGRRQSYFRTEFFA TMRILQRGDLTEDQLKGSWAGAFGHTQFMPSTYERLAVDFDGDGRRDLVSSTADALASTA NFLNKAGWQTGMPWGFEVQIPAGMSIDGEGRRSKKPLSSWSARGVTRIDGSPLIQGPLSG STPAGLMAPAGPSGPVFLVFKNFDAIYSYNAAESYGLAIAHLSDRLRGAGPFVSSWPTDD PGTSRAERREIQQFLINRGYDIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILRAF RQEQARKMMQ >gi|333032592|gb|GL891834.1| GENE 13 12891 - 14012 1052 373 aa, chain - ## HITS:1 COG:XF2671 KEGG:ns NR:ns ## COG: XF2671 COG0026 # Protein_GI_number: 15839260 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Xylella fastidiosa 9a5c # 3 361 2 365 393 315 46.0 7e-86 MDKTIGIFGGGQLGRMMAQAALPLNIQCTFFEANTDCPAGVLGQVFSSQNEQGLKQFIES ADVFSLEFENTPVADVDVLTQTKTLHPPRIALAIAQNRLSEKALFDELAIPVAPYRAVDS LESLKKAVAELGLPIVLKTATGGYDGKGQFVLRSEDQIDTAWAELGPAKSLVAESFVKFS REVSIIAVRGQNGEVKTWPLAENHHHNGILSHSIVPAPNSEALQPVAQDYITRLLNHLNY VGVLTLELFVTEQGLCANEMAPRVHNSGHWSIEGAVCSQFENHIRAVAGLPLGSTDVVRP TVMINIIGQHPKTEDVLALNGAHLHLYNKSERAGRKLGHITLMPVDSNELTNLCRQLAKI LPEPLALTDDMII >gi|333032592|gb|GL891834.1| GENE 14 14022 - 14534 745 170 aa, chain - ## HITS:1 COG:PA5426 KEGG:ns NR:ns ## COG: PA5426 COG0041 # Protein_GI_number: 15600619 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Pseudomonas aeruginosa # 11 167 4 160 163 200 68.0 1e-51 MNAVATDTQPLVGIIMGSQSDWATLEHTANMLKQLGVPFEAEVVSAHRTPDRLFEYAETA RDRGIQVIIAGAGGAAHLPGMCAAKTDLPVLGVPVKSSILNGVDSLLSIVQMPAGIAVGT LAIGPAGATNAAIMAAQILGLTRPEIAKNVADFRAAQTDKVASNNIPGQV >gi|333032592|gb|GL891834.1| GENE 15 14718 - 15083 259 121 aa, chain - ## HITS:1 COG:VC1574 KEGG:ns NR:ns ## COG: VC1574 COG3169 # Protein_GI_number: 15641582 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 5 121 10 125 127 110 52.0 5e-25 MMKDVPLSPTVLAFVLLIISNCFMTLAWYGHLKFLHHAPFWQAILFGWAIALLEYSFMIP ATRLLSDQGWTLGEMKITQEVVTLIVFVPFMVLLFKQPFKLDYVWAMLCLFGCVYFVFRS Q >gi|333032592|gb|GL891834.1| GENE 16 15322 - 16695 1746 457 aa, chain + ## HITS:1 COG:PA4020 KEGG:ns NR:ns ## COG: PA4020 COG0773 # Protein_GI_number: 15599215 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Pseudomonas aeruginosa # 1 452 1 449 451 580 64.0 1e-165 MHLHILGICGTFMGSLALLARDLGHKVTGSDSNVYPPMSTQLENAGIELMQGYDRSHLQP HPDLVIVGNAMKRGIDAVEYMLNEGLPYISGPQFLADHVLQGKHVLGVAGTHGKTTTTTM LAWVLDQAGLNPGFLIGGVPLGFSESARLGGGKYFVVEADEYDSAFFDKRSKFVHYHPKT AILNNLEFDHADIFDDLAAIQKQFHHLVRTIPSEGRIIAPITETHIDEVLEMGCWTPVIR TSLEANEKATLSAELISIDGSHFKVLENGNVVGEVKWSMTGQHSVANALATIAAAQHVGV SLEKACEALSNFGGVKRRMELLGTINGIEVYDDFAHHPTAIDTTLDGARKRLGERRLWAI IEPRSNTMRMGSHKDGLAHSARLADEVIWYQPEGLDWDLQPVIEAATNHAQVSRSLDEII DRIVNEAGEGDAVVIMSNGGFGGLHQKLMSALKAKAA >gi|333032592|gb|GL891834.1| GENE 17 16766 - 18016 963 416 aa, chain - ## HITS:1 COG:DR1273 KEGG:ns NR:ns ## COG: DR1273 COG4292 # Protein_GI_number: 15806291 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 42 323 33 315 429 74 26.0 3e-13 MRVRGVNIKVLTCWHFIRERYFMTTQEKQKKLSLRPLSPRDPEQPHRAATPLELLFDLIF VVAIATAGQQLHHAIIENHLWHALPSYLMVFFALWWAWMNFSWFASAYDNDDALYRCLTF VQIVGSLVMAAGIPDVFHSQDFDIIIVGYVIMRLALVTQWLRAAKHDPERRITAYRYAIG IVLVQIGWLVANFAHALSIPLFLLLVAVELFVPIYAEKYSPTPWHPHHIVERYALLTIIV LGESIVGSFNAIRDALAAQSINIPAVFLMIGGLMLMFAMWWAYFDRSEQHHHVKGVRPFV WGYGHYFVFVSVAAVGAALAAAVDVTTHHAHISDLYMGVIVAVSVVLYTSCIWILYEFQC LSGITKWFYPITALIILCIPFICNNVGYSVFAMGIVYTLRLFISNKFMQNIEPKQV >gi|333032592|gb|GL891834.1| GENE 18 18152 - 18748 405 198 aa, chain + ## HITS:1 COG:STM0865 KEGG:ns NR:ns ## COG: STM0865 COG0671 # Protein_GI_number: 16764227 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 3 176 2 179 202 129 39.0 4e-30 MSLETLNLSLFHVINGAQDASQFIIRLAIFFANDLLYILLFILTFLWFYGDQDLKNRVIK SVFLTCVSLLVGYVISLFYHHPRPFVMGVGTTLIEHAPTASFPSNHMLIFSTIALSYLFA QRKMIGIILLFLSFVVAWSRIYLGVHFPLDMLGAFIVALLVNTAGYYFWNAYGTSLTAFC IHLYQIICKPLLDRGLIK >gi|333032592|gb|GL891834.1| GENE 19 19125 - 20024 772 299 aa, chain + ## HITS:1 COG:ECs3970 KEGG:ns NR:ns ## COG: ECs3970 COG0861 # Protein_GI_number: 15833224 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Escherichia coli O157:H7 # 1 297 20 320 321 306 55.0 2e-83 MLLIDFLGFKQKQGQDVSIKQAAYWSVAWVSVAALFGGGLWLYLQQTVGVTLANQKTMEY FAGYLLEKSLAIDNVFVWLMIFAAFAIPAALQRKILLYGVLGAIILRTLFIFIGAWFVQE FSWVLYIFGAFLVYTGFKFLKGQEEETNIEDIKLLKWLRNHMRITPQLEGDKFFVRQNGL LWATPLFLVLILVEASDVIFAVDSIPAIFAVTSDPFIVLTANLMAILGLRAMFFLLAGAA TKLHYLPYGLGIILLFIGAKMLLLDVFHMPIWISLSFIVIVLAITAYLSLRHNKKQLQS >gi|333032592|gb|GL891834.1| GENE 20 20213 - 20578 269 121 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3882 NR:ns ## KEGG: ABAYE3882 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 121 5 125 125 209 99.0 2e-53 MRSKKINLVVVPLLLTACSHNDGPLVQDVYNNQYDCARDWNNETCKQENSSSGHGSSYVG SRYLGPAYYQNNREVSYHGNTLHPYSNLSVGRPIISSTAKSASSSSPIRGGFGRSGFSFG G >gi|333032592|gb|GL891834.1| GENE 21 20600 - 21760 996 386 aa, chain + ## HITS:1 COG:HI0929 KEGG:ns NR:ns ## COG: HI0929 COG0754 # Protein_GI_number: 16272866 # Func_class: E Amino acid transport and metabolism # Function: Glutathionylspermidine synthase # Organism: Haemophilus influenzae # 1 385 1 392 393 374 50.0 1e-103 MKRKIFTPRPDWQVEHQNIGFDYFNLPSLDGSIYWSEGVAYEFTLKQIEQLEDAANELHQ MCLSVVGDLIQRGDYPAYFQIPETAISHIEHSWKQNAPMLYGRFDFAYDGRNIKMLEYNA DTPTGLLEASVAQWLWIEQVSGIANRDQFNSIHEELIKRWKTILPRGSHVHFAACQEAGR EDWGNLEYLMDTAYQAHLQVSELSMENIGWNGQDFVDLHNQPIQNIFKLYPWEWIWEEAF SQYIHPQTQWIEPCWKMLLSNKAILVELWKCYPNHPLLVETHTYDPQQSLSGKWVKKPIL AREGANIRVLQDGHDQGAASGSFYFDDYDKYGYVVQKWVDTPLFSGQLPTLGLWMVGHQC TGMSIREDCYDIIGNDAHFAAHYFVE >gi|333032592|gb|GL891834.1| GENE 22 22051 - 23106 1014 351 aa, chain + ## HITS:1 COG:sll1869 KEGG:ns NR:ns ## COG: sll1869 COG4638 # Protein_GI_number: 16330819 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Synechocystis # 29 279 23 272 357 99 28.0 1e-20 MNAIPTLTPLAMPCNSSFEAKDWEILSTHWYPVARIQDVSNAPQRVTLLDVNMALYKTES GEIHLVRDICPHRGVPLTKGWVDGEEIVCPYHGLRYNTEGKCTQIPAQPELTKISDRFSL TKFPVVQRYGLIWTSIHGRDIDKANIPVLDTWDDAEHQAILPPFVDIGGSSGRQLEGFID VAHFAWVHHNAFANRDNPVVPKYHTERTNYGLKTVYISNVNNYPHELKHLEPEGFLWKRT FEVYPPFSAVLTVDFPESGILKILNACCPISSNKTRLFVPLTRNFDQTGDLEKVYAFNAQ IFAEDQDMVESQKPEELPLDLMMEAHFEADRSSTTYRRILAEWGLSKRYTV >gi|333032592|gb|GL891834.1| GENE 23 23163 - 24488 1212 441 aa, chain + ## HITS:1 COG:ECs3756 KEGG:ns NR:ns ## COG: ECs3756 COG0402 # Protein_GI_number: 15833010 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Escherichia coli O157:H7 # 10 437 11 438 439 590 63.0 1e-168 MSLIANTTVVRGRFLDIQQTVSEPTDIPNQVRYLEDGVLISEHGKIKWFGAWEDAQAHLP AGVEVQHYPEQLIVPGFIDTHIHFPQTEMVGAYGEQLLSWLNTYTFPTEIQFQDKTYASE IAQFFVQELLKHGTTTALVFCTVHPESVDALFEAAERVQMRLIAGKVLMDRNAPEALCDT PETAYSDTKALIEKWHGKGRALYAITPRFAPTSTPEQLERAGQLKQEFPDVYVHTHLSEN KDEIAWVKSLFPEQAGYLDVYQHYGLTGKRSVFAHCVHLEDEEWQCMHDTQSAIAFCPTS NLFLGSGLFPLKKTWEKQVKVGLGTDIGAGTSFSLLQTVNEAYKVQQLQGDKLSAYEALY HATLGGAKALDLQDQLGNFNVGKEADFVVLNLKPTALQELRQSKSKSVEDSLFALFTLGD DRNIEATYIYGNRAYQKETAK >gi|333032592|gb|GL891834.1| GENE 24 24451 - 24600 133 49 aa, chain + ## HITS:1 COG:no KEGG:AB57_0032 NR:ns ## KEGG: AB57_0032 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 4 49 1 46 46 75 95.0 8e-13 METVLIKKKQPNKKGIVKFLLLFGICAIALKRDRHIPQNDKISQPSKGA >gi|333032592|gb|GL891834.1| GENE 25 24703 - 25230 754 175 aa, chain + ## HITS:1 COG:STM0170 KEGG:ns NR:ns ## COG: STM0170 COG0634 # Protein_GI_number: 16763560 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Salmonella typhimurium LT2 # 1 175 1 175 178 226 61.0 1e-59 MTVAMSIMISTEEIQAKVKELGEQINSHYANSDKELVLIGLLRGSVIFMADLCRTITKPH ELDFMTVSSYGGGTTSSRDVKILKDLDGEIRGKDVLVVEDIIDSGNTLSKVVEMLQTREP NSIQLCTLVSKPSRREIDLEVKFLGFEVEDKFIVGYGLDYDQKYRHLPFIGEIGL >gi|333032592|gb|GL891834.1| GENE 26 25403 - 25654 397 83 aa, chain + ## HITS:1 COG:RSc1077 KEGG:ns NR:ns ## COG: RSc1077 COG2261 # Protein_GI_number: 17545796 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 4 81 3 80 82 65 52.0 3e-11 MWSLIVAIVVGFFAGLIARALHPGDDKAGFIVTTLIGIAGSLLATYGGRLLGLYGENSAA GFIASVIGAVIILFIYNLIARKS >gi|333032592|gb|GL891834.1| GENE 27 25707 - 26405 683 232 aa, chain - ## HITS:1 COG:NMA0730 KEGG:ns NR:ns ## COG: NMA0730 COG1651 # Protein_GI_number: 15793706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Neisseria meningitidis Z2491 # 24 229 46 258 260 163 37.0 3e-40 MIKKLGILALFSLTTSLSFANVDTVRENIKKQYPNLKISNIQKTEMPGLYSANLDQQIIY LGEDGQHMFVGSMIRLKDQKNLTKDLVLGQNSIDWKQLPLKDAIKTVKGNGQHVLAVFSD PNCPYCKQLEPELDKLKDVTIYTFIYPLKPQSIVVSRQVWCAPNQSYSWKKLIEQGVKPT VASCTNPIDRNLELGKKLGFNGTPTLIFANGFKLVGARSAEEIQAVWKELGL >gi|333032592|gb|GL891834.1| GENE 28 26501 - 27469 984 322 aa, chain - ## HITS:1 COG:PA1297 KEGG:ns NR:ns ## COG: PA1297 COG1230 # Protein_GI_number: 15596494 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Pseudomonas aeruginosa # 10 314 12 324 326 272 54.0 6e-73 MQDYSVSRHHQHQFDEGNPLAQKRILIATILTASMMVLEVFGRWFFNSMALLADGWHMSS HMLALGLAYFAYRAARHYSNDHRFSFGTWKIEILAGYSSAILLMVVAIFMAFQSIQRLFN PVEIFYNEAIPIAILGLVINLICAWLLHDDGHHHHHHHHHHHEHSHGHHHHDLNQKAAFL HVVADAVTSVFAIVALFAGKYFGWDFLDALLGILGAILVAKWSFGLMKETGKTLLDAEMD HPVVDEIREVIAEFPKHAEITDIHVWKVAKGKFSCILALETDDISLNADQIRDALSIHDE IVHISVEINTLKPVYVPRETLA >gi|333032592|gb|GL891834.1| GENE 29 27527 - 27790 239 87 aa, chain + ## HITS:1 COG:STM1628 KEGG:ns NR:ns ## COG: STM1628 COG1937 # Protein_GI_number: 16764972 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 68 1 68 91 63 49.0 1e-10 MSHIGQDKKIVNRVKRLKGQINSIENAIEQPESSCIDILQQVAAIKGAINGLMSELMEQH LHHHVLKGAEVDQNELDEFLKVLKRYG >gi|333032592|gb|GL891834.1| GENE 30 27836 - 29191 1888 451 aa, chain - ## HITS:1 COG:ECs4641 KEGG:ns NR:ns ## COG: ECs4641 COG0486 # Protein_GI_number: 15833895 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Escherichia coli O157:H7 # 1 451 1 454 454 451 56.0 1e-126 MHSQTTIAAIATPPGRGGVGVIRLSGPKAYDIAQKLTQKNLPEARMAGFRKFYDADGSIM DEGIVLCFPNPHSFTGEDVVELQGHGGPVIQNALLGRLFELGAIAAKAGEFSMRAFENGK MDLVQAEAIADLIDATSQAAARSAVRSLQGAFSTKINTVLEKLIHLRLHVEAAIDFPEEE IDFLADGKILALLEDVQQSVHAVQTSARQGQLLREGLQVVIAGKPNAGKSSLLNALAGVE RAIVTDIAGTTRDVLHEKISLNGLPITLTDTAGLRETGDVVEKEGIRRAIKEIEQADLLL LVYDLNQGDDPLKLAQEYFAEHIEPRRLMLIGNKCDLTGQSAEISDYQGFRHITVSAKQE MGVQGLVDAIIAHAGFHPEEDTFIARTRHLDAMKRTQLYLAEAREQLVVFNAGELVAESL RLAQNALGEITGDFSADDLLGKIFGSFCIGK >gi|333032592|gb|GL891834.1| GENE 31 29282 - 31042 1901 586 aa, chain - ## HITS:1 COG:PA5568 KEGG:ns NR:ns ## COG: PA5568 COG0706 # Protein_GI_number: 15600761 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Pseudomonas aeruginosa # 6 577 5 574 578 533 46.0 1e-151 MQQWARFAILGAMFVTAYLLILAWQKDYGNAATAPQQQAAAVSSHEVSADLPNAKTATVA SDVPQANIAQSQTTDATAPVNQQLISVQTDLYHLWINPKGGDIVRIELLSHDKSKDSNQP FVMLENDAKRTYVAQSGLIGLNGPDSSRGGRPLYAVEKTSYTLADAKGVQDQSGHSEKVL TVPMVFKTPEGVEIIKTFTFTQGQYPIVVKHQVVNRSQQNWQGQMFGQLKRDNSEDPGKS SQGIFTLGTFLGGAWGTPDAHYNKLKFANFSEEKLNTEAKGGWVAMVQHYFVSAWIPGNL KLTQANGQPYVAKLESRQSADHMNIIGFTSPVINVPAGTSMEVDAKLYSGPKVQSELKDL AVGLNQTVDYGWLWPIAKLLFLGLQFFHSIVGNWGWSIILLTIMVKMILWPLSSKSYRSM AKMRVIAPEMQRMKEEFGEDRMRFSQEMMALYKREQVNPLSGCLPLLLQMPIFLALYWVL MESVELRHAPWLGWIQDLSAMDPWFILPLIMGATMFAQQMLNPQPADPMQAKVFRIMPIM FTVFMLFFPAGLVLYWIVNNSITILQQWFINKSVEKSRISKAESAS >gi|333032592|gb|GL891834.1| GENE 32 31048 - 31368 290 106 aa, chain - ## HITS:1 COG:PM1164 KEGG:ns NR:ns ## COG: PM1164 COG0759 # Protein_GI_number: 15603029 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pasteurella multocida # 3 71 10 78 86 104 65.0 3e-23 MVRILRWFIRLYQIAISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPW GGSGYDPVPPKAIRFISFHQIDSQTHHVAVPFRDRLMKQNLSNHLG >gi|333032592|gb|GL891834.1| GENE 33 31379 - 31771 193 130 aa, chain - ## HITS:1 COG:PM1163 KEGG:ns NR:ns ## COG: PM1163 COG0594 # Protein_GI_number: 15603028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Pasteurella multocida # 5 120 16 129 130 84 43.0 6e-17 MALYSFSTDLRIHCAADYKSVFDGALFKVHQPHFLFLAKLTEQPNSRLGIVVAKKKVRRA HERNRIKRLARESFRLHQPKFGSDIDVVVMPKVGIETITNAELYQQLDFAWQKLQRLAKK HSKVVPTSQN >gi|333032592|gb|GL891834.1| GENE 34 31801 - 31989 312 62 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643005|ref|YP_001085989.1| 50S ribosomal protein L34 [Acinetobacter baumannii ATCC 17978] # 1 62 1 62 62 124 98 8e-28 MHNKIADLYRKIIFGSFDMKRTFQPSELKRKRVHGFRARMATKAGRQVLARRRAKGRHSL TV >gi|333032592|gb|GL891834.1| GENE 35 32606 - 34003 1625 465 aa, chain + ## HITS:1 COG:VC0012 KEGG:ns NR:ns ## COG: VC0012 COG0593 # Protein_GI_number: 15640044 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Vibrio cholerae # 2 465 10 472 472 442 48.0 1e-124 MLWTDCLTRLRQELSDNVFAMWIRPLVAEEVEGILRLYAPNPYWTRYIQENHLELISILA EQLSEGRVRQVEILVDSRPGSILSSSEQPATTTAALQTAPIPQPAKVKREPEPVANTAVS SKSSKKKLLNPQFTFSLFVEGRSNQMAAETCRKVLTQLGASQHNPLFLYGPTGLGKTHLM QAVGNALLQAKPNARVMYMTSESFVQDFVSSLQKGKVEEFKKNCRSLDLLLVDDIHLLAG KEASLVEFFYTFNALLDESKQIILTSDRYPKELTELDPRLVSRFSWGLSVGVEPPDIETR IEILLKKAENSGVDLPRNCALFIAQQVVANVRELEGALNKVVAISRFKGAPIDLDVVRES LKDVLAIRARTISVENIQRVVSEYFRIPLKELVGPKRTRIYARPRQLAMGLARELTGDSF PEIGMAFGGRDHSTVMHACEKVVSLREEDPIFDEDYKNLLRLLQS >gi|333032592|gb|GL891834.1| GENE 36 34101 - 35249 1347 382 aa, chain + ## HITS:1 COG:PA0002 KEGG:ns NR:ns ## COG: PA0002 COG0592 # Protein_GI_number: 15595200 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Pseudomonas aeruginosa # 1 382 1 367 367 314 47.0 2e-85 MRLKIAKESLLNVLSHVVGAVERRHTLNILSNVKIQTNAQALTITGSDLEVELVASTALS EGACLEAGETTVPARKLMEICKSLPTAALIDLQITEDQRCILKSGNSRFVLGTLPAEDYP LLTTENSQGTQVQVTQRELKRLFEKTAFAMAVQDVRFYLTGTLLEIDENQLRAVTTDGHR LALCEILASSTSSQLVQAIVPRKAVGELQRLLSIEDEQLTLLIGRELLNVTINTPSRDKE QGDITVRFTTKLIDGKFPDYRRVIPRGGDKHVLIGHDVFKQSLQRVAILSNEKLRGVFLN FNQDSLQLRANNPEQDEAIEDLAIQYQSAPLEMSFNAQYLLDVLGVLDGDDVNMSMTEAN QSVLVQDPAHPDQTYVVMPMRV >gi|333032592|gb|GL891834.1| GENE 37 35264 - 36346 880 360 aa, chain + ## HITS:1 COG:PA0003 KEGG:ns NR:ns ## COG: PA0003 COG1195 # Protein_GI_number: 15595201 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Pseudomonas aeruginosa # 1 356 1 360 369 217 37.0 3e-56 MHLTRLNIERVRNLKTVALHGLQPFNVFYGANGSGKTSILEAIHLLATGRSFRTHIPKNY IQYEADDAIVFAQSATEKIGMQKLASGEQLMKVNGDTVATQGQLAKLLPLQHIDPQSTDI IDHGAKPRRQLLDWLMFHVEPEFYFAWQYYSRALKQRNTLLKTRRNLSLADLEPWNKMLS DYGEILHSQRLSIVEQWNVYFQNDLSQLLPDLEIELEYSPGFHTEQGLMQDLLNQHQKDI ERRYTEYGPHRADLRLKTPFGHADDVLSRGQKKLLIIALKLSQIAMLHASNKETVVLLDD LTAELDLTAQQRLIERLSQLGSQVFMTTLDHASVKKHLHDLSISYQLFSVESGQVSLAAP >gi|333032592|gb|GL891834.1| GENE 38 36399 - 38867 2671 822 aa, chain + ## HITS:1 COG:VC0015 KEGG:ns NR:ns ## COG: VC0015 COG0187 # Protein_GI_number: 15640047 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Vibrio cholerae # 19 821 5 804 805 1048 66.0 0 MSSESQSASQTEQTNEKAYDSSSIKVLRGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN AIDEALAGHCDEIIVTIHEDESVSVSDNGRGIPTDIHPEEGVSAAEVILTILHAGGKFDD NSYKVSGGLHGVGVSVVNALSSKLHLTIYRAGQIHEQEYHHGDPQYPLRVIGETDNTGTT VRFWPSAETFSQTIFNVEILARRLRELSFLNAGVRIVLRDERINLEHVYDYEGGLSEFVK YINEGKNHLNEIFHFTADADNGIAVEVALQWNDSYQENVRCFTNNIPQKDGGTHLAGFRA ALTRGLNQYLENENILKKEKVNVTGDDAREGLTAIISVKVPDPKFSSQTKEKLVSSEVKP AVEQAMNKEFSAYLLENPQAAKSIAGKIIDAARARDAARKAREMTRRKSALDIAGLPGKL ADCQEKDPALSELYLVEGDSAGGSAKQGRNRKMQAILPLKGKILNVERARFDKMISSQEV GTLITALGCGIGREEYNPDKLRYHKIIIMTDADVDGSHIRTLLLTFFFRQMPELVERGHI YIAQPPLYKLKKGKQEQYIKDNDALETYLISNAIDELALHISADAPAITGEALAKVIQDY QVSQKSLQRLTLRYPASLLDALLEVDAFKADQNHDQAYVQQWADQVREAVQRLQPSLRPE ITLETFERENAQGEKSAHYWPRVTVYVHNLPHAYLLDAGLLNSAEYARLLKNSKSWFKLI EDGAYLQKGDRRIQVANFHQVWQHILQDSRRGMMIQRYKGLGEMNAEQLWETTMDPENRN MLQVTIDDAIEADRMFSCLMGDDVEPRRAFIEENALNADIDA >gi|333032592|gb|GL891834.1| GENE 39 38908 - 39297 452 129 aa, chain + ## HITS:1 COG:YPO3320 KEGG:ns NR:ns ## COG: YPO3320 COG3783 # Protein_GI_number: 16123473 # Func_class: C Energy production and conversion # Function: Soluble cytochrome b562 # Organism: Yersinia pestis # 16 129 14 127 127 68 30.0 3e-12 MSQKILASMLISCAALVSHSAFAADLEADMKTLAKSTKAFAEAKDIDNAKQQLVIMRQAA LSSKLSLPHKLEGLPPENVQVKEYQAGLDQLVAEIDRVTVFVDKGQLDQAKTEAINLVNI RNENHKKFR >gi|333032592|gb|GL891834.1| GENE 40 39383 - 39940 204 185 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 [Campylobacter rectus RM3267] # 12 173 4 163 208 83 31 3e-15 MNFIDFITNFEQFLPILIQEYGAWVYAILFLIIFSETAFVFMFFLPGDSLLLTVGALCSV VELMHLGYMITLLTVAATLGYIVNYSIGRHFGNRIFEAKSRFIKKEYLNKTNRYFLQHGG KTILLARFIPFARSFAPLAAGSSNMSYGKFLIYNVAGAILWICILLTAGYLFGHALIQVT DFVEN >gi|333032592|gb|GL891834.1| GENE 41 40191 - 42122 1910 643 aa, chain - ## HITS:1 COG:STM3459 KEGG:ns NR:ns ## COG: STM3459 COG0488 # Protein_GI_number: 16766748 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 1 637 1 631 635 639 53.0 0 MIQFDQVSLRRGGRVLFQKASMQLHPGWKIGLTGVNGAGKSTLFAALLGSLGADEGSLTR PSVWTVAHMAQEVKALDMPAIDFVLSGDEEYWDIQNKLAQPEQLTDSDLAKLHGRFDEIH GYSAPSKAAQLMAGLGFLEHQLRLNVASFSGGWRMRLNLARTLMSRSDLLLLDEPTNHLD LDAILWLEDWLKAYEGTLILISHDRDFLDAITDHILHIENQELTLYTGNYSTFETTRSER LAQQQQAFEKQQEARAHLQKFIDRFKAKATKARQAQSRIKQLERMQQLAPAHVDTPFTFS FREPTKMSSPLLTLENASIGYGDKKIAEKIKLQITPNLRIGLLGMNGAGKSTLIKSLVGD LPLLAGERKASELLNIGYFAQHQMDALDGQASPMLQLARIADKQISEATLRSFLGSFGFS GERMDTPCESFSGGERARLALALIVWQRPNVLILDEPTNHLDLDMRHALSMALQDFEGAV VLVSHERQLIASVCDELLLVHGGKCTEFEGDLQDYAKWLREARQQQINAQTAVAQNNSSS AAPAPAKVDKEAQRKEAARRREQTRPIRKNIEKVESQIEKLQPRLAEIEEALADTSLYEA NRKDDLLKLMNEQTELKAKLEQYEEQLLELMMELEEMEASFEN >gi|333032592|gb|GL891834.1| GENE 42 42375 - 43379 710 334 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000008 NR:ns ## KEGG: ABBFA_000008 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 334 1 334 334 675 99.0 0 MKKRLGIVSAVICCAMGTTHAGQNVCVFDLLGKSGESYKMMEEWALAAKSWQADITLIPF QDEALVDRRLREGKCDAAYMTSMRARNYNKFAGSIDAIGGVTSNAIAQKAISYVLDQRNK HRMLTTQNGTNYEVVGIVQIGLAYLFVRDRNLNSIEKVRGTKFAILQYDAAQKIMVESVG AQPIPSEITDFVKKFNSGQVEAIAAPAYAYKPLEIGKGIGANGAMFTFPVVNVTGDLIAR SDKFPANFGMKSREWFIKQLPQNFAMVKRLETGIPPKIKLNFSAEDKLKYQKILRGGRLG LTKQGVYDATMMSVLKRARCTIERTNFECTLTGE >gi|333032592|gb|GL891834.1| GENE 43 43635 - 44642 1212 335 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000009 NR:ns ## KEGG: ABBFA_000009 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 335 1 335 335 635 100.0 0 MKKIVLAMAAASVVGFSASAQAASTVCVFDLLGKAGDSYKMMEEWALAAKGWGTEINLVP RQDEAVADNDFKAGKCDAVAMTAMRARQYNKFAGSIDSLGGVPNNQIAQRAITYVLDARN AAKMTTNLGGKKYEVAGISPLGSAFIFVRDKNINSVEKAAGKKFAVLGYDDAQKIMVQRV GAQAVLSDISNFAAKFNNGQVDMVGAPAYAYKPLELNKGLGANGVMWNFPVLHVTADLVL RADKFPAGFGQKSRDWFVKQLPKSFAMINRLEAQIPGKYKMNLSAEDKLKYQKMLRDGRM DLTKRGIYDAGMMSVLKKARCSVDKANFECSMPGE >gi|333032592|gb|GL891834.1| GENE 44 44985 - 45989 1166 334 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000010 NR:ns ## KEGG: ABBFA_000010 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 334 1 334 334 662 100.0 0 MRFSKTLLLAMGLTTISFAAEAKQTICVFDFVGKNGDVYALMKDYQLAAKNWGADIELKV NQNEAVIAEDFKAGKCDGISVSGMRGRQFNSFTGSLDAIGAIPDLKLAVKVMQGLASQTF SKYMVNGRYEVVGVIPVGDAYLLVNDRSINTVAKAAGKKIAVLDYDEAQKIMVQQVGAQA VSADVTNFGAKFNNHQVDIIGAPAAAFKPLELQKGLGTKGAIVNYPILQVTGNIIIRPDK FPAGFGQKSREWVAGQLPRAFTILGKMKADIPQKYWMEVPAADKPGYQKLMRESRINLTK RGVYDKRMMKLLWQFRCKQDAKNFECGLQDENYK >gi|333032592|gb|GL891834.1| GENE 45 46114 - 46449 362 111 aa, chain + ## HITS:1 COG:RSc0494 KEGG:ns NR:ns ## COG: RSc0494 COG0316 # Protein_GI_number: 17545213 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 6 111 19 124 124 136 60.0 9e-33 MNAQALVLTDNAANKVRQLRDSEGNDDLMLRVYVTGGGCSGFSYGFNFAESVNEDDAEFV NGDVKMLVDSLSYQYLVGSVVDYVEGLEGSRFIVQNPNATTTCGCGSSFSI >gi|333032592|gb|GL891834.1| GENE 46 46504 - 47349 540 281 aa, chain - ## HITS:1 COG:all4221 KEGG:ns NR:ns ## COG: all4221 COG0596 # Protein_GI_number: 17231713 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Nostoc sp. PCC 7120 # 27 276 28 283 287 140 32.0 2e-33 MDLTKRIHQYTRGAWAFNVIDSGPIDGPLVVLLHGFPETAHSWEQTSELLHEHQFRTFAI HQRGYSLNARPQSRFHYALSELTEDVAVFIKGLGQPVYLIGHDWGSVIASSVAMKYPQYI QHLTLVSVPHQAAFLKACLSSNQLLKSYYFAVFQLPILPELLFKKMPKVARKFLKSSGMT EQQIEIFETEFIKENRLTTALNWYRGFFWEKPENLFKAIDVPTLFIWGKHDIAVTEKSAM LNSGYFKNNYKAIFMDASHWIPYQNAPELVQCFLESIHDQA >gi|333032592|gb|GL891834.1| GENE 47 47477 - 48604 1233 375 aa, chain - ## HITS:1 COG:PA0666 KEGG:ns NR:ns ## COG: PA0666 COG2377 # Protein_GI_number: 15595863 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted molecular chaperone distantly related to HSP70-fold metalloproteases # Organism: Pseudomonas aeruginosa # 5 372 4 360 363 313 45.0 3e-85 MSAIYIGVMTGTSMDGVDIVAASFEPLQLHATLTVPFEPELRDELMALTLPDDNEIDRMG KADVALAKMIGHGINSLIEKHQLDRSQIKAIGSHGQTIRHRPEHGFTLQIGDPNIITEIT QIPVVSDFRRRDMAAGGQGAPLVPAFHQALFQHPSIHRVILNLGGIANVSMLPANNPDGV FGFDTGPANILMDAWCHRHTGHPYDENGDWAAYGHPIRSLLDRLYAHEYFSKEPPKSTGR EDFNIDWLDDQLIDWRNDLTYDELEDTPENIQATLLKLTVRAIQKAIYRSNMETGEVYVC GGGAYNSYLLEQLRWRLRKHNWSVQTTDVLGLSPTWVEATAFAWLAMRFVDGLSGNLPAV TGASDFRILGTITAV >gi|333032592|gb|GL891834.1| GENE 48 48666 - 49898 313 410 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 48 378 42 382 418 125 28 6e-28 MCLGFVMSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGH TVLINKLKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKI LDPNKTKVRFNSEWFNQKSAADLIQLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPL VQGYDSIALEADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSL GNYIGVFDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQEVKRIL ALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLN PNAAAAKDAVARGAVKVDWNVVDASFSVKENGTFIIQSGKKAIARVTFTD Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:37:26 2011 Seq name: gi|333032591|gb|GL891835.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld31, whole genome shotgun sequence Length of sequence - 92665 bp Number of predicted genes - 89, with homology - 89 Number of transcription units - 54, operones - 21 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 56 - 95 2.9 1 1 Tu 1 . - CDS 105 - 938 192 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 - Prom 994 - 1053 4.0 + Prom 1034 - 1093 5.1 2 2 Tu 1 . + CDS 1135 - 1806 717 ## COG1309 Transcriptional regulator + Term 1859 - 1898 1.1 + Prom 1808 - 1867 4.9 3 3 Op 1 40/0.000 + CDS 2062 - 2772 891 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 4 3 Op 2 . + CDS 2782 - 4140 1363 ## COG0642 Signal transduction histidine kinase + Term 4150 - 4210 6.6 - Term 4154 - 4186 2.3 5 4 Tu 1 . - CDS 4210 - 5406 1070 ## ABBFA_000104 secretory lipase family protein - Prom 5537 - 5596 8.0 + Prom 5410 - 5469 6.3 6 5 Tu 1 . + CDS 5644 - 6402 735 ## COG4588 Accessory colonization factor AcfC, contains ABC-type periplasmic domain + Term 6404 - 6443 5.1 - Term 6392 - 6429 3.1 7 6 Tu 1 . - CDS 6473 - 6892 302 ## Daci_1358 hypothetical protein - Prom 6929 - 6988 9.1 - Term 6965 - 7011 8.3 8 7 Tu 1 . - CDS 7023 - 8243 1416 ## COG2421 Predicted acetamidase/formamidase - Prom 8394 - 8453 10.3 - Term 8606 - 8640 -0.9 9 8 Op 1 1/0.312 - CDS 8672 - 9523 1014 ## COG0688 Phosphatidylserine decarboxylase 10 8 Op 2 . - CDS 9520 - 10368 893 ## COG2897 Rhodanese-related sulfurtransferase - Prom 10395 - 10454 5.6 - Term 10464 - 10507 1.1 11 9 Tu 1 . - CDS 10519 - 11733 1047 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 11838 - 11897 3.5 + Prom 11812 - 11871 6.1 12 10 Tu 1 . + CDS 11902 - 12345 461 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 12357 - 12383 -1.0 - Term 12337 - 12380 7.1 13 11 Tu 1 . - CDS 12385 - 12864 597 ## ACICU_03584 hypothetical protein - Prom 13037 - 13096 10.3 - Term 13062 - 13092 1.1 14 12 Tu 1 . - CDS 13118 - 13453 398 ## ABBFA_000098 hypothetical protein - Term 13810 - 13841 2.5 15 13 Tu 1 . - CDS 13863 - 15086 1333 ## COG0560 Phosphoserine phosphatase - Prom 15107 - 15166 3.6 + Prom 15066 - 15125 4.0 16 14 Tu 1 . + CDS 15164 - 16453 1420 ## ABSDF3574 hypothetical protein + Term 16476 - 16505 2.1 + Prom 16495 - 16554 12.1 17 15 Op 1 18/0.000 + CDS 16693 - 17814 1232 ## COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 18 15 Op 2 17/0.000 + CDS 17826 - 18296 610 ## COG0054 Riboflavin synthase beta-chain 19 15 Op 3 11/0.062 + CDS 18300 - 18749 582 ## COG0781 Transcription termination factor 20 15 Op 4 12/0.062 + CDS 18765 - 19682 938 ## COG0611 Thiamine monophosphate kinase 21 15 Op 5 . + CDS 19660 - 20175 301 ## COG1267 Phosphatidylglycerophosphatase A and related proteins 22 15 Op 6 9/0.125 + CDS 20192 - 21556 1718 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 23 15 Op 7 . + CDS 21569 - 23407 2163 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 23419 - 23465 6.1 - Term 23449 - 23489 -0.3 24 16 Op 1 . - CDS 23493 - 24293 733 ## COG0796 Glutamate racemase 25 16 Op 2 . - CDS 24317 - 24955 452 ## COG0546 Predicted phosphatases - Prom 24977 - 25036 5.3 26 16 Op 3 . - CDS 25055 - 26881 1521 ## COG4805 Uncharacterized protein conserved in bacteria - Prom 26981 - 27040 9.3 - Term 27069 - 27105 3.0 27 17 Op 1 7/0.125 - CDS 27135 - 28055 893 ## COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 28 17 Op 2 . - CDS 28066 - 29271 1290 ## COG1228 Imidazolonepropionase and related amidohydrolases 29 17 Op 3 2/0.250 - CDS 29323 - 30735 1627 ## COG1113 Gamma-aminobutyrate permease and related permeases 30 17 Op 4 6/0.125 - CDS 30800 - 32338 2018 ## COG2986 Histidine ammonia-lyase - Prom 32358 - 32417 1.9 31 17 Op 5 2/0.250 - CDS 32426 - 34102 2069 ## COG2987 Urocanate hydratase - Prom 34229 - 34288 10.3 - Term 34289 - 34327 5.5 32 18 Op 1 1/0.312 - CDS 34353 - 34928 469 ## COG3758 Uncharacterized protein conserved in bacteria 33 18 Op 2 . - CDS 34925 - 35677 767 ## COG2188 Transcriptional regulators - Prom 35745 - 35804 8.3 + Prom 35905 - 35964 7.9 34 19 Tu 1 . + CDS 36030 - 37142 715 ## COG1835 Predicted acyltransferases + Term 37150 - 37180 0.2 - Term 37138 - 37168 0.2 35 20 Tu 1 . - CDS 37176 - 38441 1360 ## COG0523 Putative GTPases (G3E family) - Prom 38504 - 38563 4.8 + Prom 38406 - 38465 2.7 36 21 Tu 1 . + CDS 38499 - 38639 59 ## ACICU_03607 hypothetical protein - Term 38479 - 38523 -0.6 37 22 Tu 1 . - CDS 38584 - 39267 634 ## ABBFA_000071 peptidase M15 family protein - Prom 39333 - 39392 9.9 - Term 39368 - 39410 5.4 38 23 Tu 1 . - CDS 39427 - 40815 1360 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 40960 - 41019 7.6 + Prom 40953 - 41012 6.3 39 24 Op 1 9/0.125 + CDS 41174 - 42481 1144 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 40 24 Op 2 3/0.250 + CDS 42468 - 43100 504 ## COG0625 Glutathione S-transferase 41 24 Op 3 . + CDS 43118 - 43666 708 ## COG0346 Lactoylglutathione lyase and related lyases + Term 43693 - 43753 17.2 + Prom 43731 - 43790 3.2 42 25 Tu 1 . + CDS 43966 - 44745 784 ## COG1414 Transcriptional regulator + Term 44763 - 44795 4.0 - Term 44741 - 44790 13.6 43 26 Tu 1 . - CDS 44810 - 45865 1304 ## COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins + Prom 46279 - 46338 7.4 44 27 Tu 1 . + CDS 46388 - 46858 534 ## COG1683 Uncharacterized conserved protein + Term 46859 - 46899 -1.0 45 28 Tu 1 . - CDS 46879 - 48222 881 ## COG0534 Na+-driven multidrug efflux pump - Prom 48309 - 48368 5.3 - Term 48336 - 48374 4.6 46 29 Op 1 . - CDS 48401 - 49339 849 ## COG0385 Predicted Na+-dependent transporter 47 29 Op 2 . - CDS 49394 - 50032 623 ## COG1335 Amidases related to nicotinamidase - Prom 50064 - 50123 5.6 + Prom 50128 - 50187 4.4 48 30 Op 1 . + CDS 50368 - 51261 1039 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 49 30 Op 2 . + CDS 51277 - 51879 650 ## ABBFA_000059 hypothetical protein 50 30 Op 3 . + CDS 51917 - 52636 1078 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 52649 - 52690 9.0 + Prom 52672 - 52731 10.7 51 31 Op 1 . + CDS 52824 - 53027 247 ## ABBFA_000057 hypothetical protein + Term 53083 - 53117 1.3 + Prom 53067 - 53126 9.3 52 31 Op 2 . + CDS 53312 - 54151 690 ## COG2116 Formate/nitrite family of transporters 53 32 Tu 1 . - CDS 54166 - 55431 1406 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 55454 - 55513 3.0 54 33 Tu 1 . - CDS 55537 - 56706 1209 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 56742 - 56801 7.9 55 34 Tu 1 . - CDS 56819 - 57277 358 ## COG2983 Uncharacterized conserved protein - Prom 57307 - 57366 5.5 + Prom 57335 - 57394 4.5 56 35 Tu 1 . + CDS 57472 - 57630 277 ## gi|262377122|ref|ZP_06070347.1| predicted protein + Term 57645 - 57699 3.7 + Prom 57648 - 57707 7.1 57 36 Op 1 . + CDS 57802 - 58539 1045 ## COG0412 Dienelactone hydrolase and related enzymes + Term 58550 - 58598 -0.5 + Prom 58569 - 58628 7.1 58 36 Op 2 . + CDS 58724 - 59086 465 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + Term 59108 - 59146 7.0 + Prom 59145 - 59204 4.2 59 37 Op 1 . + CDS 59228 - 60262 701 ## PROTEIN SUPPORTED gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 60 37 Op 2 . + CDS 60310 - 60846 530 ## COG0739 Membrane proteins related to metalloendopeptidases 61 37 Op 3 . + CDS 60856 - 61101 301 ## ABBFA_000047 hypothetical protein 62 37 Op 4 . + CDS 61132 - 61692 345 ## PROTEIN SUPPORTED gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) 63 37 Op 5 . + CDS 61731 - 62759 1217 ## COG1064 Zn-dependent alcohol dehydrogenases + Term 62793 - 62842 2.1 - Term 62637 - 62693 3.6 64 38 Tu 1 . - CDS 62762 - 64186 1149 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 64017 - 64076 4.0 65 39 Tu 1 . + CDS 64277 - 64651 333 ## ABSDF3628 hypothetical protein - Term 64415 - 64450 3.4 66 40 Tu 1 . - CDS 64635 - 65537 778 ## COG0583 Transcriptional regulator - Prom 65592 - 65651 9.0 + Prom 65565 - 65624 5.2 67 41 Op 1 3/0.250 + CDS 65658 - 66461 1060 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 68 41 Op 2 . + CDS 66466 - 67656 1173 ## COG2814 Arabinose efflux permease + Term 67657 - 67703 13.4 - Term 67645 - 67690 13.2 69 42 Op 1 . - CDS 67697 - 68350 656 ## ABBFA_000039 START domain protein 70 42 Op 2 . - CDS 68402 - 69223 1081 ## COG0289 Dihydrodipicolinate reductase - Prom 69275 - 69334 5.9 + Prom 69277 - 69336 5.3 71 43 Tu 1 . + CDS 69408 - 69758 430 ## ABBFA_000037 hypothetical protein + Term 69819 - 69856 6.0 - Term 69804 - 69846 8.8 72 44 Op 1 . - CDS 69873 - 70985 1331 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 71005 - 71064 3.9 73 44 Op 2 . - CDS 71090 - 71467 443 ## ABBFA_000035 hypothetical protein - Prom 71487 - 71546 5.2 74 45 Op 1 27/0.000 - CDS 71607 - 74732 3273 ## COG0841 Cation/multidrug efflux pump 75 45 Op 2 . - CDS 74735 - 75835 1088 ## COG0845 Membrane-fusion protein - Prom 75906 - 75965 10.7 + Prom 75877 - 75936 9.6 76 46 Op 1 . + CDS 75985 - 76608 348 ## COG1309 Transcriptional regulator + Term 76653 - 76689 -0.2 + Prom 76634 - 76693 5.3 77 46 Op 2 . + CDS 76779 - 79463 2915 ## COG2352 Phosphoenolpyruvate carboxylase + Term 79491 - 79526 3.0 + Prom 79522 - 79581 10.1 78 47 Op 1 . + CDS 79764 - 81059 742 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 81069 - 81097 1.0 79 47 Op 2 . + CDS 81139 - 82029 737 ## COG0583 Transcriptional regulator 80 48 Op 1 . - CDS 82038 - 82769 602 ## COG0730 Predicted permeases 81 48 Op 2 . - CDS 82848 - 84137 1019 ## ABBFA_000027 hypothetical protein - Prom 84381 - 84440 4.7 - Term 84359 - 84424 6.2 82 49 Tu 1 . - CDS 84451 - 86280 2151 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 86480 - 86539 5.4 + Prom 86473 - 86532 13.8 83 50 Op 1 20/0.000 + CDS 86629 - 87591 993 ## COG0223 Methionyl-tRNA formyltransferase 84 50 Op 2 . + CDS 87588 - 88892 1102 ## COG0144 tRNA and rRNA cytosine-C5-methylases + Term 88898 - 88926 1.4 - Term 88874 - 88924 5.3 85 51 Op 1 . - CDS 88935 - 89078 255 ## AOLE_00090 hypothetical protein 86 51 Op 2 . - CDS 89091 - 90569 1726 ## COG0733 Na+-dependent transporters of the SNF family - Prom 90640 - 90699 7.2 87 52 Tu 1 . + CDS 90580 - 90723 66 ## ABBFA_000021 hypothetical protein + Prom 91070 - 91129 7.7 88 53 Tu 1 . + CDS 91198 - 91890 897 ## ABSDF3654 hypothetical protein - Term 91824 - 91862 -0.9 89 54 Tu 1 . - CDS 91948 - 92547 534 ## COG0625 Glutathione S-transferase - Prom 92591 - 92650 6.6 Predicted protein(s) >gi|333032591|gb|GL891835.1| GENE 1 105 - 938 192 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 11 245 9 223 259 78 30 1e-13 MKNFKNKVAAITGAGSGIGQQLAILLAKQGCHLSLSDINEKGLEKTVELLKPYSNITVTT KKLDVSDREAVKQWAQETVQDHGCVNLIFNNAGVALGSTVEGATYEDLEWIVGINFWGVV YGTKEFLPFIKQTQDGHIINVSSLFGLTAQPTQSGYNATKFAVRGFTESLRQELDIEKCG VSSLCVHPGGIRTNIAKAAKMSDSLSSLGMDPTKSIQNFDKLLRTPPEEAARQILDAVLK NKRRLLIGSDAKILDAFQRLFPTGYQRASTIVTKWMK >gi|333032591|gb|GL891835.1| GENE 2 1135 - 1806 717 223 aa, chain + ## HITS:1 COG:MT0847 KEGG:ns NR:ns ## COG: MT0847 COG1309 # Protein_GI_number: 15840238 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 9 219 24 218 239 66 25.0 5e-11 MATNDSTSKKKTKTVSKERQFKGLSLSERKEARREKLIEAGIATYGTLGFFSVTVKDVCQ EAKLTERYFYESFKKSEDLFQTIFLKMIEELQQNLMQAVIKAAPDPEQMVDAGLRALLST LKDDPRLARIVYVDAILVQELHNQATIQETLAQFDRMIQAFVMLTMPQIQHNENELSLIA TGLNGYVTQIAVRWVMGGFKQSLEQVLAACRIVFLALLAKVSK >gi|333032591|gb|GL891835.1| GENE 3 2062 - 2772 891 236 aa, chain + ## HITS:1 COG:PA5360 KEGG:ns NR:ns ## COG: PA5360 COG0745 # Protein_GI_number: 15600553 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 6 231 6 229 229 310 67.0 2e-84 MKDDYILIVDDELPIREMIHTSLDMAGFQCLQAEDAKQAHQIIVDQRPALILLDWMLPGG VSGVDLCRRLKRDENLAEIPVIMLTARGEEDHKVQGLDAGADDYMTKPFSTRELVSRIKA VLRRANALSGEKTIDANGLILDPVSQRVSFGNSILDMGPTEYRLLAFFMTHPERAYTRAQ LLDQVWGGNVYIEDRTIDVHIRRLRKVLEPFGVDRFVQTVRGTGYRFSTRADLAAG >gi|333032591|gb|GL891835.1| GENE 4 2782 - 4140 1363 452 aa, chain + ## HITS:1 COG:PA5361 KEGG:ns NR:ns ## COG: PA5361 COG0642 # Protein_GI_number: 15600554 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 66 443 50 429 443 334 48.0 2e-91 MYEPYPVPEQVREQKLSRYSSLWTFAKQDLRLLLFFLIIAGLVGLGIGYFWSCIFIAFVV FFTLQLRSLYLVNDWIANNPYDVPPNLNGIWGALLFNVYRAQRQERIVQAEMVGLIDRAQ SSLVALAEAVVLIDDQHQIEWWNPAAERLLGISPLDRGRNLLTILRQPTFIEYFNNIDQA PDGIKLHSNLDDDRYVQVKLTRFGGESRLLVAYDVTRMHNLEQMRKDFVDNISHELRTPL TVLSGYIETFTDQEDINPRWKRAFDQMQSQTKRMNALVNDLLLLSNLENNKKIAKNQIIE MPSLMNQLFDDAQAYNADYGHTLNLHIDSHCDLIGSDMEIASAFSNLITNAIKYTPKGGT ITIGWHDDGEHAYFSVQDTGIGINPKHLPRLTERFYRVDSDRSRQTGGTGLGLAIVKHVL MQHGAYLDVLSKENEGSTFTAVFPKERLYNMT >gi|333032591|gb|GL891835.1| GENE 5 4210 - 5406 1070 398 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000104 NR:ns ## KEGG: ABBFA_000104 # Name: not_defined # Def: secretory lipase family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 398 1 398 398 760 95.0 0 MIRKSNSLLKILFSSICLISGSAMAAPITDLSKQIVSEKPGSILSIAQQDETDLFLHADQ RLLVNYRSRGVNGEPIVASAFILLPKGTPPKNGWPVLAWAHGTTGVADTCAPSGDYAGGP VHSYQEVASKALDGWLARGYAVVAPDYQGLGTLGAHPYMNAKSQLHTVVDAVRALHMLKP KDFNKQWLVMGHSQGGAAAIAVSAYGQKDAPELDLKGVIALAPGGYQYEGIAEYVLSHPN PEPNVAAFFPIVLLGAQAAEPSIIPENLVSSEMGKVLTQARSRCLSELQSDLKKSPSSIF RPNVDLKPLLSYLKQQSIENMVPTVPLMIVQGSKDHLVDARGTYAYYQQLCKSKKPTIYQ TIDGGDHRDALRQSHTFATDFLNLIEKNQTKSYCSNFK >gi|333032591|gb|GL891835.1| GENE 6 5644 - 6402 735 252 aa, chain + ## HITS:1 COG:ECs1772 KEGG:ns NR:ns ## COG: ECs1772 COG4588 # Protein_GI_number: 15831026 # Func_class: R General function prediction only # Function: Accessory colonization factor AcfC, contains ABC-type periplasmic domain # Organism: Escherichia coli O157:H7 # 12 252 8 249 252 211 43.0 2e-54 MSKQKFIPYLIFLILGSLSIHSFADVQVYGPGGPAPAMKEAAKQFTNKTGIAVHVNSGPT AQWSEKAKLDADIIYSGSEAMMSDFENAFSEQIIKDSVEPLYLRPAAILVRKGNPKNIKG FKDLAKSGVKVLVTHGAGQVGMWEDIAGRTGNIQLTKAFRKNIATYAANTGIAKKNWEEN SSYDAWLVFNIWGISNPDVGQIIPIEPELVVYRDTGVALTKHSLKDTETKRFVEFLSSQQ GNTIFKKYGWTK >gi|333032591|gb|GL891835.1| GENE 7 6473 - 6892 302 139 aa, chain - ## HITS:1 COG:no KEGG:Daci_1358 NR:ns ## KEGG: Daci_1358 # Name: not_defined # Def: hypothetical protein # Organism: D.acidovorans # Pathway: not_defined # 23 135 22 134 141 103 42.0 3e-21 MQSLPNVLLYLAALLTLCAALLHFVCVFWGANGFRFLGAGKSIVQMVERGHWYPNFTAIT VGLILTVCSMYAFFAAKGIQVLPFTKIILSLVAAVFLIRGFAFPWLKSKFVGNSDLFWYV SSAFCLILGALYAAGVYLI >gi|333032591|gb|GL891835.1| GENE 8 7023 - 8243 1416 406 aa, chain - ## HITS:1 COG:CC2611 KEGG:ns NR:ns ## COG: CC2611 COG2421 # Protein_GI_number: 16126848 # Func_class: C Energy production and conversion # Function: Predicted acetamidase/formamidase # Organism: Caulobacter vibrioides # 68 398 8 301 304 168 36.0 2e-41 MLKVKCLTASVLSVLCISLTHANDFKVLNQISKQPTQLQTGEYKGNYYVPSTLNTITWGY LPNRDAKPVLTVPSGSVVTFDTVSHEGLLEDQGRNAEKFFQSKGVKSNEILEDAKTITQS NLKHDFHKDGPHIVTGPVAIEGAQPGDILKVEVLKVEPRVPYGVISSRHGKGALVGEFPK KAKQENASAEHPERYGNVSIFTPIEKNAKGEYEGVLKTESGKSIRFPLYPFMGIMGVAAN TSEPVHSVPPAMYGGNIDINELGAGSTAYYPVQVKGALFYTGDSHFAQGDGEVALTALEA SARATLKFTLLKAGKDKIPGKELKQPLAENAEFWITPGLDEDLDEAMKKSTREAIRFLNQ EYGIDEATAYAYLSAATDFEVSQVVDKTKGIHAKIRKADFKEFESK >gi|333032591|gb|GL891835.1| GENE 9 8672 - 9523 1014 283 aa, chain - ## HITS:1 COG:PA4957 KEGG:ns NR:ns ## COG: PA4957 COG0688 # Protein_GI_number: 15600150 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine decarboxylase # Organism: Pseudomonas aeruginosa # 1 277 1 281 289 293 55.0 2e-79 MSFTSRLKKELFIKAQNLVPQHQLSRVVGKVAASENPILKAAVIHAFKTKYGIDLSIAEQ GNALKYKSFNDFFTRALKDGVRLVDENPDSIVSPADGAISQIGKITAGEVFQAKGQSFSV EKLIGDPQLAQPFQDGEFATVYLSPRDYHRVHMPFAGTLTETLYVPGELFSVNQVTAENV PGLFARNERMVCLFDTELGRMAVVLVGAMIVAGIETVATGKVKPSGRIELQHHQLKLEKG AELGRFYLGSTAVILFEKDKIEWEQRFKAESVVVMGERMGHTI >gi|333032591|gb|GL891835.1| GENE 10 9520 - 10368 893 282 aa, chain - ## HITS:1 COG:PA4956 KEGG:ns NR:ns ## COG: PA4956 COG2897 # Protein_GI_number: 15600149 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Pseudomonas aeruginosa # 8 275 7 269 271 170 35.0 3e-42 MTLPDFKLDLLIEAEELVPYLGNEYIRIVDLSRTSVYEQLHVPHAIHLQPKWLVAQHEEA TGVLPDEAGLQALIEKLNISPNHHVVVYDDEGGAWAGRLIWNLHCLGFTRTSLINGGIHA WLGAGLPTTAEVEELPRVDNLIQIDLSHAAQFRVNYEELRKQVEQESVQLWDCRTSDEYS GVRLAARRGGHIPNALHFEWSTALNRQNHLKLHPLERTRQRLEQLGFDLKQPVVVYCQSH HRSGLAYILARLLGWEAKAYDGAWSEWGNRLDSPIITGESPS >gi|333032591|gb|GL891835.1| GENE 11 10519 - 11733 1047 404 aa, chain - ## HITS:1 COG:NMA1706 KEGG:ns NR:ns ## COG: NMA1706 COG1488 # Protein_GI_number: 15794599 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Neisseria meningitidis Z2491 # 1 399 18 415 419 635 75.0 0 MSPIIHSLLDTDLYKFTMLQVVLHKFPQTHSVYHFRCRNLEDTVYPLVDILDDLNEQLDH LCNLKYKEDELQYLRKLRFIKSDFVDYLELFQLKRRFIHASIDEEGRLDIRIEGPMVQAM MFEIFVLAIVNELYFSRIKTDEVWAEGERRLQAKLELIQQYEKSQQPNDPPFLVSDFGTR RRYSFEWQKHVVAAFHNTVPNVFRGTSNVLLAKELNITPIGTMAHEFLQAFQALDVRLRD FQKAALETWVQEYRGDLGIALTDVVGMDAFLRDFDLYFAKLFDGLRHDSGDPYEWGDKAY AHYRKLKIDTKTKMLTFSDGLNLPKAWELHQYFKDRFQVSFGIGTNLTNDMGQTPLNIVL KLVECNGQSVAKISDSPGKTMTDNDTFLAYLRQVFQIEELDEAI >gi|333032591|gb|GL891835.1| GENE 12 11902 - 12345 461 147 aa, chain + ## HITS:1 COG:ECs4810 KEGG:ns NR:ns ## COG: ECs4810 COG1490 # Protein_GI_number: 15834064 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Escherichia coli O157:H7 # 1 145 1 145 145 157 56.0 9e-39 MRALIQRVLEAKVVVDGETTGEIQHGLLVFLGIGRDDTLATGQKLIDKILKYRIFDDEQG KMGWNVSQANGGVLLVSQFTLMAQTQKGLRPDFGPAMPPSDAKALYEQLVEYTRSQFENV QTGIFAADMKVHLINDGPVTFNLEVEA >gi|333032591|gb|GL891835.1| GENE 13 12385 - 12864 597 159 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03584 NR:ns ## KEGG: ACICU_03584 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 159 299 100.0 2e-80 MKLSSIPVVKLPLVDVSTDPLDLLVAGLALRMKQLARTSPKFIELVHDRAFRIQIGTDLG VARQIIINHGHIDTVAGSPEKADFILQFADSEQGVKTLLKGDPTAFMTGMQDGSIKMEGD FSLLVWFNQAAKLIPPKLPKPVKDKVRQARAFIKEKTGR >gi|333032591|gb|GL891835.1| GENE 14 13118 - 13453 398 111 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000098 NR:ns ## KEGG: ABBFA_000098 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 111 1 111 111 199 100.0 4e-50 MVTANFAAIAGLSLIAVALVAVFFSPYRRWLGFMLAGMFFWGLLEVVRFGVQVTFEMPVT YSYLTALSLAMVMVTFVLLREDKQAQKALANRQYIEHTPVYEDDQQQCSSR >gi|333032591|gb|GL891835.1| GENE 15 13863 - 15086 1333 407 aa, chain - ## HITS:1 COG:PA4960_2 KEGG:ns NR:ns ## COG: PA4960_2 COG0560 # Protein_GI_number: 15600153 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 190 403 1 214 217 263 69.0 3e-70 MREIILISFLGPDQPNQFTRLMQVLSVHSLQILDVGQAVIHNQLTLGIVVASENETATAL AMKEILILAHDIGLTVRFKPISGAEYDQWVSEGGRTRYIVTALAPELTAAHLQAVTQIVS SQGFNIETVTRLSGRVDLEKDSTLPRRACVQFGLSSGPTLDAQAMRAACLLLSSELNIDV AVQEDNAYRRNRRLVCFDMDSTLIEQEVIDELALEAGVGEQVAEITERAMQGELDFQQSF RARVALLKGLDASVLPKIAERLTITEGAERLISTLKALGYKTAILSGGFQYFAEYLQAKL GIDEVHANVLDVQDGVVTGEVKGVIVDGARKAELLRELANKLGISLEQAMAVGDGANDLP MLAIAGLGVAYRAKPLVRQNANQAISSVGLDGVLYLLGMHDKDLSRA >gi|333032591|gb|GL891835.1| GENE 16 15164 - 16453 1420 429 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3574 NR:ns ## KEGG: ABSDF3574 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 429 1 429 429 763 99.0 0 MIAPRQGLFASLLIISFALHTFLLVIATTHQLNENRASQGQLMTSQLVADSLSELEPANT VSLALIANRYATNPSVASIRILDANKQVLATSGMSKTRQGEIFVRDALQNEKKVGSIEIT LIQPSIGEILRTQWLAILASLFLHVLLWLAYRAIARPTRSEYLARINEENRLKHEIQELT QALALEKQNTVTLVAQAQQQAKAKPIVRSQPEKSLESTDQNTLALNIQFYDPKQLLSSVN QSVSVPYFKLCQLFLNKSIELCTKHYHLKATDIDVVDEFHAEGATLAISTSHPHAVECLL MVGTVFQLLSDVLYKRYREDKRFALQTRSAVCNAVEAMQIDAKEAAQRLAQHLHAKESAL YLDNEQLKAIQDSYQLVAMPNPSNVMTRHAFMINGMNAECAELAQNIRTEILMGKKSIPQ NDSPSSAAS >gi|333032591|gb|GL891835.1| GENE 17 16693 - 17814 1232 373 aa, chain + ## HITS:1 COG:RSc0713_1 KEGG:ns NR:ns ## COG: RSc0713_1 COG0108 # Protein_GI_number: 17545432 # Func_class: H Coenzyme transport and metabolism # Function: 3,4-dihydroxy-2-butanone 4-phosphate synthase # Organism: Ralstonia solanacearum # 1 203 24 226 226 298 72.0 8e-81 MPLSRVEELVADIRAGKMVILMDDEDRENEGDLVIAATHVRPEDINFMITHARGLVCLTL SRERCKQLNLPLMVGQNGAQHGTNFTLSIEAAEGITTGISAAERAHTIQAAVAAHAKPTD IVQPGHIFPLMAQPGGVLHRAGHTEAGCDLARLAGLEPASVICEIIKEDGTMARRADLEI FAEKHGLKIGTIADLIHYRMTNEQTVERLDQRTIQTEYGSFELYRYREIGNPDIHLALVK GEPKEGVTTVRVHGFSPVRDLLKLNKADGEPAWNLDRALQTIAASDRGVLVWIGQDHLQD LGPALDDLTKPKPVKSNAALSHQYQTIGVGAQILRDLGVEKMKLLSSPLRFNALSGFNLE VVEYVTADQITTK >gi|333032591|gb|GL891835.1| GENE 18 17826 - 18296 610 156 aa, chain + ## HITS:1 COG:PA4053 KEGG:ns NR:ns ## COG: PA4053 COG0054 # Protein_GI_number: 15599248 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Pseudomonas aeruginosa # 1 153 1 152 158 190 66.0 1e-48 MAIRRIEGLLHLASEGRYAILVGRFNSFVVEHLLEGAIDTLKRHGVNEDNITVIHAPGAW ELPIVAKKLATSNQFDAIIALGAVIRGSTPHFDFVAGECAKGLGVVALESSLPVINGVLT TDSIEQAIERSGTKAGNKGSEAALTAIEMVNLLKAI >gi|333032591|gb|GL891835.1| GENE 19 18300 - 18749 582 149 aa, chain + ## HITS:1 COG:PA4052 KEGG:ns NR:ns ## COG: PA4052 COG0781 # Protein_GI_number: 15599247 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Pseudomonas aeruginosa # 10 149 19 158 159 149 51.0 2e-36 MSQTLQAAYAAKRKARRFAVQGIYEWQMSHNPVHEIEARTRAENAMHKVDLNYYHELLTQ VIAQHEDLDALLIPVLDREIDALDGVELATLRLGAYELRDHLEIPYRVVLDEAIELAKHF GGADSHKYINGVLDRLSSTLRSAEKQQAK >gi|333032591|gb|GL891835.1| GENE 20 18765 - 19682 938 305 aa, chain + ## HITS:1 COG:thiL KEGG:ns NR:ns ## COG: thiL COG0611 # Protein_GI_number: 16128402 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate kinase # Organism: Escherichia coli K12 # 2 305 4 323 325 250 46.0 3e-66 MAEFSIIDQYFNRQSHPDVALGIGDDSALITPPPNQQLVICADTLVAGRHFPLETSPHAI GWKSVAVNLSDIAAMGAKPHSILLAISLPQVDHEWLEGFSQGIYDCCNQFGVALIGGDTT QGPHLTITVTAMGWIETGKAVLRSGAKVGDYVCVSGQIGDAAYGLQHLGHSLQQRLDYPT PRCKLGEELKGLASSMIDVSDGLAQDLGHILKASKVGARLILEKLPVDPVLQQLEERQRW QYALAGGDDYELCFTITPQNYEKLLQKQLDVKITMIGQIVEQTKLTFEHLGSDYPLQIHG YQHFA >gi|333032591|gb|GL891835.1| GENE 21 19660 - 20175 301 171 aa, chain + ## HITS:1 COG:YPO3179 KEGG:ns NR:ns ## COG: YPO3179 COG1267 # Protein_GI_number: 16123341 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphatase A and related proteins # Organism: Yersinia pestis # 27 169 18 157 161 133 53.0 1e-31 MDTNTLHKPPIHFKDMSWFNRCIVFCGVGFGSGLAPKAPGTFGSAFALLFVPIWLSLGFT LSLIAILIMSVVGIYICGQTAKILDVHDDGRIVWDEFAGQSITFLPLLYLQQINWIWVIT GFILFRIFDVWKPWPIRVIDRQVHGGFGIMLDDIIAGVWAALCTLIIIHLS >gi|333032591|gb|GL891835.1| GENE 22 20192 - 21556 1718 454 aa, chain + ## HITS:1 COG:VC2762 KEGG:ns NR:ns ## COG: VC2762 COG1207 # Protein_GI_number: 15642755 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Vibrio cholerae # 1 453 1 453 453 520 57.0 1e-147 MSTTVIILAAGKGTRMRSQLPKVLQPLAGRPLLGHVIKTAKQLLAENIITIYGHGGDHVK KTFAQENIQWVEQAEQLGTGHAVQMTLPVLPKDGISLILYGDVPLVRQTTLEQLIEVSNK TGIGMITLHVDNPTGYGRIVRQDGKIQAIVEHKDATEAQRQIQEINTGIYCVSNAKLHEW LPKLSNENAQGEYYLTDIVAMAVADGLEIASIQPELAFEVEGVNDRLQLAALEREFQKQQ AKELMQQGVTFADPARFDLRGTVKVGHDVRIDVNVIIEGDCELGDFVEIGAGCILKNTTI AAGTKVQAYSVFDGAVVGENTQIGPFARLRPGAKLANEVHIGNFVEVKNTTIGLGSKANH FTYLGDAEIGAESNIGAGTITCNYDGANKHKTTIGDAVFIGSNSSLVAPVTIGNGATVGA GSVITKDVAEQSLSFERAQQISKANYQRPQKLKK >gi|333032591|gb|GL891835.1| GENE 23 21569 - 23407 2163 612 aa, chain + ## HITS:1 COG:glmS KEGG:ns NR:ns ## COG: glmS COG0449 # Protein_GI_number: 16131597 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Escherichia coli K12 # 1 612 1 609 609 697 58.0 0 MCGIVGGVAERCVTEILIEGLKRLEYRGYDSAGVALLNNQQILRERRVGKVANLADAVSE HQLTGAIGIAHTRWATHGKPTENNAHPHMSGKVAVVHNGIIENYQELKDDLQALGYVFTS QTDTEVVAHLVAEALKNTDSLLEAVESVVPQLKGAYALGIIHSDYPDELITVREGSPLVI GVGIGENFISSDQLALLPVTNRFIYLEEGDIARLTRTSIEVFVKGERVERPVKELDATVS SASKGEYKHYMLKEIYEQPEAIKQTISQALDGNNLRDDFLKDADADFSKLQSVQIIACGT SYHSGMIAKYWFEQLIGVPCQVEIASEFRYRSPVIVENTLYICISQSGETADTLAALRET QKRAKANNIDIQTLTICNVATSSMVRETDHHLLTLAGPEIGVASTKAFTTQLAALMLLIL KIGQVKQRISNVMIEELARELWHSPKVILDTLKQDAEILRLSELFVEKQHCLFLGRGTHY PIALEGALKLKEISYIHAEGYAAGELKHGPLALVDTEMPIVILAPNDEMLDKLKSNMEEV QARGGELFVFADENSGVVEKDRQHVVQIPAVNEWLAPIIYSVPVQLLSYHVAVLRGTDVD QPRNLAKSVTVE >gi|333032591|gb|GL891835.1| GENE 24 23493 - 24293 733 266 aa, chain - ## HITS:1 COG:RSc1956 KEGG:ns NR:ns ## COG: RSc1956 COG0796 # Protein_GI_number: 17546675 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Ralstonia solanacearum # 6 266 7 265 277 200 39.0 3e-51 MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGDRESDWIVSRTTHLI SNLVAQGKCKAIVIACNTMTAVAVETIRAQINVPLIAIEPAVKPAVAITQSKHIAVLATA TTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKAHTAEVKDYLKNILAPLVEQKVD TIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHIIWT SSDPLEVADVTFSLLSEKLSVKAVEL >gi|333032591|gb|GL891835.1| GENE 25 24317 - 24955 452 212 aa, chain - ## HITS:1 COG:CC1643 KEGG:ns NR:ns ## COG: CC1643 COG0546 # Protein_GI_number: 16125889 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Caulobacter vibrioides # 5 211 30 235 246 141 35.0 1e-33 MEKNLKEYQAIIFDLDGTLADSFHFFLSVLNQLSAKYKFKSVSLHEVDYYKQLTPREIMK EMNVSRWKLPWIAKDFIRLMKERDEEIHLFEGMRDHLIELHKRGYTLAIITSNSKENCQN VLGKELCELFSHIDGGSSIFGKAKRIKRVLNILDVSKNQAIYVGDQTTDGEAAHEAGIDF AAVGWGYTSAEKLKTIQPKVVLTDLATMKEFF >gi|333032591|gb|GL891835.1| GENE 26 25055 - 26881 1521 608 aa, chain - ## HITS:1 COG:XF0221 KEGG:ns NR:ns ## COG: XF0221 COG4805 # Protein_GI_number: 15836826 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 49 603 49 604 613 579 51.0 1e-165 MKNRTLHFACISVLFWMSHSSNAATPEINTNTIEKSQSKQKSDVSVRVKALNQLLQEQWE YTLKNNPETATTLGDLRYNDRWTEFSKNQIEKDKKTTQNFLKRFEAIDSTGFSATDQLNK DLMIYQLKETLKNYDLKLYEMPFNQMWGLHLQFPGFISSIPFDNAKQYQDYISRLKQIPL ILEQGIQLAKQGQKDGLMPPKYLIEKVAKQITSIAMPAGKDSVFASPLKQFPKNISKAEQ ERLSREILQAIDQNVRPAYQKLGTFIQKDYLPYGRQHEGIWSLPNGDELYRFYVENNTTT SESPENIHQLGLKEVARIEAEMLKIAKAQGFNDLKSFQQSLKTNPAVFPKSREEILEIYR GYIAQMQPELPKLFGLLPKNKVEVLPVEQYREKEAAGAEYHQGTPDGSRPGQVYVNTGDF SERSKISMEATAYHEAIPGHHMQIDIAQNLPNLPMFRKQPNHTAYIEGWALYAEQLGKDV GFYKDPLSDYGRLSSELFRACRLVVDTGVHYKKWTRQQMIDFMREHSALDEPDIQAETDR YIAIPAQALAYKMGQLKILELRELAKHELGDRFDIKAFHDMVLNAGTLPLNILDARIKNW IKEQKAAA >gi|333032591|gb|GL891835.1| GENE 27 27135 - 28055 893 306 aa, chain - ## HITS:1 COG:RSc2645 KEGG:ns NR:ns ## COG: RSc2645 COG0010 # Protein_GI_number: 17547364 # Func_class: E Amino acid transport and metabolism # Function: Arginase/agmatinase/formimionoglutamate hydrolase, arginase family # Organism: Ralstonia solanacearum # 7 300 10 310 325 256 45.0 4e-68 MNHTFKWQGRHDGEGEAHQRIHHIVNTTQHAEFVLIGFSSDEGVKRNKGRVGAADAPDAI RTQLANLPIHRPVSIVDLGTVTCEYGNLEQAQSELAEQVANSLEHGLKPVVLGGGHEVAF GSFSGLFQYVQAHAPDKKIGIINFDAHFDLREAEHATSGTPFLQAARLSEQYQKQFNYLC IGVANHANTKILFDTADALNCSYLRDHEVNIFNLNNVLAAVDAFIEKVDCLYVTIDLDVF TAAVAPGVSAPAVKGIDLATFEAIFKHIQETGKIKLLDIAECNPKFDLDNRTAKLAAYIV YQYLFS >gi|333032591|gb|GL891835.1| GENE 28 28066 - 29271 1290 401 aa, chain - ## HITS:1 COG:PA5092 KEGG:ns NR:ns ## COG: PA5092 COG1228 # Protein_GI_number: 15600285 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Imidazolonepropionase and related amidohydrolases # Organism: Pseudomonas aeruginosa # 1 399 1 399 402 624 75.0 1e-178 MKKLWQNCHIATMQNGQYSYIEDAAIVTEGHLIHWIGKQQQLPADTYSETVDLNGAWVTP GFIDCHTHSVFGGNRSVEFEKRLQGVSYAEIAASGGGIASTVRATREASEEQLLNSALKR IRCMQQDGVTTIEIKSGYGLNYENERKMLRVIRQIGEALPMTVKSTCLAAHALPPEYKDQ SDAYIEHICTEMLPKLHAEGLVDAVDAFCEHLAFSPAQVERVFKTAQSLGLPVKLHAEQL SSLGGSSLAARYHALSADHLEYMTEDDVKAMAESGTVAVLLPGAFYLLRETQYPPIESLI KHGVRIALSSDLNPGTSPALSLRLMLNMGSTLFRLTPEQALAGVTIHAAQALGLEQTHGS LEQGKVADFVAWDIEHPSEIVYWLGGDLPKRVVQHGQEVIF >gi|333032591|gb|GL891835.1| GENE 29 29323 - 30735 1627 470 aa, chain - ## HITS:1 COG:PA5097 KEGG:ns NR:ns ## COG: PA5097 COG1113 # Protein_GI_number: 15600290 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Pseudomonas aeruginosa # 1 452 1 453 467 610 72.0 1e-174 MSQNSTLQRGLNTRHIRFLALGSAIGTGLFYGSATAIKMAGPSVLLAYIVAGIAIYIVMR ALGEMAVHNPVSGSFSHYASQYIGPLAGFTTGWTYVFEMVIVAIADVTAFGIYMGFWYPD VPRWIWILSLIMFLGAINLIHVKVFGELEFWLSIVKVSAIVAMILGGLGLMFYGFHADHS SVVPGIQNLWIYEGFMPHGIAGLVACLSVVVFAFGGIEIIGITAGESQDPKTTLPKAINA VPVRILLFYVLTIFVLMSIFPWNQIGSQGSPFVQIFENLGIKSAANILNIVVVTAAISAI NSDVFGAGRMLYGMANRGQAPRIFQKLSRNGVPWMTVVVMAGVLLIGVVLNYLIPENVFV IIASIATFATVWVWLMILLSQVAMRRKLSTAEIKALDFPVFGWPYAPAFAIGFMVFILVM MGYFPDSRPAIYVGITWLALLTIAYRIWVKPEQSLGKESEPVQQNIEMES >gi|333032591|gb|GL891835.1| GENE 30 30800 - 32338 2018 512 aa, chain - ## HITS:1 COG:PA5098 KEGG:ns NR:ns ## COG: PA5098 COG2986 # Protein_GI_number: 15600291 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Pseudomonas aeruginosa # 1 509 1 509 509 830 88.0 0 MELLIQPGKLTLADLRQAYLNPIKVKLDESASSAINASVACVEQIVNEGRTAYGINTGFG LLASTKIAPEDLEKLQRSLVLSHAAGVGEALDDAMVRLIILLKANSLARGFSGIRRKVID ALLALINAEVYPHIPLKGSVGASGDLAPLAHMSLVLLGESKARYKGEWLPAVEALKIAGL EPISLAAKEGLALLNGTQVSTAYALRGLFEAEDLFAAATVCGGLSVEAMLGSRAPFDARI HEVRGQRGQIDVAAAYRDLLTDSSEISRSHEECGKVQDPYSLRCQPQVMGACLTQIRQAA EVLEIEANAVSDNPLVFAEQGDVISGGNFHAEPVAMAADNLALAIAEIGSLSERRISMMM DRHMSQLPPFLVANGGVNSGFMIAQVTAAALASDNKALAHPASVDSLPTSANQEDHVSMA PNAGKRLWYMADNVRGILAVEWLGACQGLDFREGLKSSPKLEQARKILRDQVPYYSEDRF FAPDIEQASELLASGCLNELLIPKLLPSLSEV >gi|333032591|gb|GL891835.1| GENE 31 32426 - 34102 2069 558 aa, chain - ## HITS:1 COG:PA5100 KEGG:ns NR:ns ## COG: PA5100 COG2987 # Protein_GI_number: 15600293 # Func_class: E Amino acid transport and metabolism # Function: Urocanate hydratase # Organism: Pseudomonas aeruginosa # 3 557 2 556 559 1056 90.0 0 MTTTTTKFRDVEIRAPRGTELTAKSWLTEAPLRMLMNNLDPDVAENPKELVVYGGIGRAA RNWECFDKIVDTLKNLETDETLLVQSGKPVGVFKTHKDAPRVLIANSNLVPHWANWEHFN ELDAKALAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGDLKGRWVLTAGLGGMG GAQPLAATLAGACSLNIECQQASIDFRLRTRYVDEQATDLDDALARIDRYTKEGKAISIA LHGNAAEILPELVRRGVRPDMVTDQTSAHDPLNGYLPVGWTWDEYRERAKKEPEAVVKAA KQSMAKHVQAMLDFQKMGVPTFDYGNNIRQMAKEEGVANAFDFPGFVPAYIRPLFCRGIG PFRWAALSGDPEDIYKTDAKVKELIPDDEHLHHWLDMARERISFQGLPARICWVGLGLRA KLGLAFNEMVRSGELSAPIVIGRDHLDSGSVASPNRETEAMQDGSDAVSDWPLLNALLNT AGGATWVSLHHGGGVGMGFSQHSGVVIVCDGTDEAAARIARVLTNDPATGVMRHADAGYE IAINCAKEQGLHLPMITQ >gi|333032591|gb|GL891835.1| GENE 32 34353 - 34928 469 191 aa, chain - ## HITS:1 COG:PA5104 KEGG:ns NR:ns ## COG: PA5104 COG3758 # Protein_GI_number: 15600297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 2 170 4 175 196 130 43.0 1e-30 MIKLIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIIS VLDGQGMVLHVDDLPAKKLKQGDIFAFHGESQVQSELVDGAIQDLNLIYDPAKFHARFQW LNEAAEQAFISSADLIFIFNQGGETEVNVDEHSVQLAAHETLKIEKKSGVTSMNFPKKKH KSCYIIELIQR >gi|333032591|gb|GL891835.1| GENE 33 34925 - 35677 767 250 aa, chain - ## HITS:1 COG:PA5105 KEGG:ns NR:ns ## COG: PA5105 COG2188 # Protein_GI_number: 15600298 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 249 1 249 250 301 57.0 1e-81 MPRTSKQEHTELSIEADSPVPLYQRVKQLISQKIYEGSWAVNKKIPSESELVNQLGCSRM TVNRALRELTTEGLLVRIQGVGSFVAEGQGRTALFQINNIADEIIARNHKHHAEVLVLEQ IYANAEQSVLMQTREGQKLFHSIIVHYENDVPVQVEDRLVDAALIPDYLEQDFKTITPNA YLMAKAPVTEGEHIVEAVLASPQECKWLKITKAEPCLLIRRRTWSNKQLISSARLIYPGS RYYLEGKFNP >gi|333032591|gb|GL891835.1| GENE 34 36030 - 37142 715 370 aa, chain + ## HITS:1 COG:SA0834 KEGG:ns NR:ns ## COG: SA0834 COG1835 # Protein_GI_number: 15926563 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Staphylococcus aureus N315 # 6 357 19 359 604 87 28.0 3e-17 MRNYKIDILRGISILLVLLHHFNIPYKLKDTWLGFDFLGEAFSTVIARNGNYGVTMFFVI SGFLITHHTLKRDKQFSAINLKHFYIRRAARILPCLVLLILGVSILGSFDLKPFMNQAPN GIEVSYPLTIFAALTFWMNILIIKFGWVNYALGVLWSLSVEEVFYFVFPLLCLLTRSNKV FIAVFVGVILYGPYFRSLHFGEESGAYLYHYFSSFDGIAVGCLTAIFSHKYQPNWTYKKP LSWLIILSMTALYLYAPIKEVSTWGISLFALATGLLILCFQHPSETQAHSLFTKVMVWLG QRSYETYLFHLVVLGLMKVAFIPAQTDSSIKIMLLIGYLVLTFIISAAIEKYYSTPLNSY IRKVFIKDKS >gi|333032591|gb|GL891835.1| GENE 35 37176 - 38441 1360 421 aa, chain - ## HITS:1 COG:PA5535 KEGG:ns NR:ns ## COG: PA5535 COG0523 # Protein_GI_number: 15600728 # Func_class: R General function prediction only # Function: Putative GTPases (G3E family) # Organism: Pseudomonas aeruginosa # 23 412 4 394 400 479 61.0 1e-135 MISLNIIQRDQAMHTAIANSFAKLPVTVLSGFLGAGKTTLLNHILNNREGRRIAVIVNDM SEVNIDAALVREGGAELSRTDEKLVEMSNGCICCTLREDLLVEVRRLADEGRFDQLVIES TGISEPLPVAETFTFEDEDGNSLNEFARLDTMVTVVDAFNFLKDYSSVDSLQQRGESLGE QDERTVVDLLIDQIEFCDVIVLNKIDLIDQAQQDHLIAILKTLNPRARIEIAQFGKVALD KILNTQLFDFDEAAQAPGWLKELRGEHTPETEEYGISSFVYRARRPFHPERFYDLVQAEW PGVVRSKGFFWLAAEPTLAYSWSQAGAMARHGLAGYWWAAVAEEDWPSDLASIEQIKKNW DDRTGDARQELVLIGMQMDEQALIQRLDSCLLSDEEMALGPQVWQSWSNPFKQDDETMLI A >gi|333032591|gb|GL891835.1| GENE 36 38499 - 38639 59 46 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03607 NR:ns ## KEGG: ACICU_03607 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 46 1 46 46 79 93.0 5e-14 MLCYNITIDQVFIPVLSKPNHLVFEKVAFIVPDKLRFYSDGLAPML >gi|333032591|gb|GL891835.1| GENE 37 38584 - 39267 634 227 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000071 NR:ns ## KEGG: ABBFA_000071 # Name: not_defined # Def: peptidase M15 family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 227 1 227 227 467 98.0 1e-130 MKRYLGLLVLSLAACSTQTPQPTITHRSPTLPQPSKTVVKIKQQPEDYVVWIATLDHRQS VQAYKQFLKQKGLADLVPDHELLRSARDWQKCGVEPYAVPPREIWSNIVPTLNILKALVD DGVINDFEVTSVYRALALNRCAGGADASRHVFNAALDFRIGPEQPSDLDQFNIQQTKTKL CQFWATKGQAFNMGLGVYASGQIHIDSQGFRAWGPDHHYRTSICQGL >gi|333032591|gb|GL891835.1| GENE 38 39427 - 40815 1360 462 aa, chain - ## HITS:1 COG:YPO3421 KEGG:ns NR:ns ## COG: YPO3421 COG1113 # Protein_GI_number: 16123570 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 1 457 1 458 465 568 65.0 1e-162 MSTQEQGNLKHGLSNRHIQLIALGGAIGTGLFLGISQSIKLAGPSVILGYAIAGFIAFLM MRQLGEMVVEEPVSGSFSHFAYKYWGPFAGFMSGWNYWVLNVLVCMAELSAIGLYIQYWW PQIPTWASALTFFILINGINLLHVKFFGEMEFWFSIVKILAILAMIGFGSYLLATGTAGP QASISNLWALGGFFPFGIEGLVMAMAVIIFAFGGIELFGITAAEARDPDKTLPKAVNQII YRILIFYIATLFVLFSLFPWNQMAEGGSPFVMVFASLDSQGVATLLNFVILTAAVSVYNG TSYCSSRMLLGLAQQGNAPKALARINKRGIPTNAVLVSAFVTVLCVLLNYIFPEKAFGLL MMLVVAAIVINWVVISWTHLKFRKFMQRQGQTTKFPSFMYPFSNYLCMAFMLGILVVMSL TPDMRVAVMMIPGWILCLMVAYQFKRRKIKAEQPVHALEADM >gi|333032591|gb|GL891835.1| GENE 39 41174 - 42481 1144 435 aa, chain + ## HITS:1 COG:RSp0690 KEGG:ns NR:ns ## COG: RSp0690 COG0179 # Protein_GI_number: 17548911 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Ralstonia solanacearum # 12 419 14 419 423 522 60.0 1e-148 MEQKLNSFIEVSPQSDFTIHNLPYGIFSRTAEGERQVGVAIGDWVIDLAALEKHGLLKLS DQDTYFNQPTLNKFIQSGKANWSKVRKTLQSLLSVDNLTLQENEALRQEVLVKQDSVTLH LPLQVSGYTDFYSSKEHATNVGCMFRDPKNALLPNWTELPVGYNGRASSVVVSGTQVVRP SGQIKLPNEERPVFSATRKLDFELETAFVIGKPTELGQPISIENAWDHIFGMVLLNDWSA RDIQQWEYVPLGPFNSKSFASAISPWVVTLEALEPFKVEGPKQEPKPLAYLQENIANSYD INLSVEIQSPKSTQPDVICRTNFKYMYWSMAQQLTHHTIGGCNVQVGDLMGSGTISGSTP DSYGSLLELTWNTTKPLTLANGETRGFLQDGDTLIMKGHCEKNGIRIGFGEVRNTVLPAL TFDFAETSEPNYEAV >gi|333032591|gb|GL891835.1| GENE 40 42468 - 43100 504 210 aa, chain + ## HITS:1 COG:VC1347 KEGG:ns NR:ns ## COG: VC1347 COG0625 # Protein_GI_number: 15641359 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Vibrio cholerae # 3 208 6 213 215 234 52.0 7e-62 MKLYSYFRSSAAYRVRIGLNLKSLAYETVPVHLVKNEQQSEDYLKLNRSALVPTLVDGDL TLSQSLSILEYLDEQYPETKLLPNDVKERAKIRAFAQAIACDIHPLNNLRVLKYLKNDLN VSDEQKNYWYQHWILEGFQTLEQQLQDSNGQFCFGQHATIADCCLIPQVYNAKRFKIDLS AFPKIESIYQHCLSIPAFYNAAPEQQPDWE >gi|333032591|gb|GL891835.1| GENE 41 43118 - 43666 708 182 aa, chain + ## HITS:1 COG:RSp0693 KEGG:ns NR:ns ## COG: RSp0693 COG0346 # Protein_GI_number: 17548914 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Ralstonia solanacearum # 5 136 2 132 180 84 40.0 1e-16 MTFAIKKIHHVAYRCKDAKETVEWYKKMLNMDFILAFAEDHVPSTKAFDPYMHLFLDAGQ GNVLAFFELPTQPEMGRDENTPQWVQHIAFEVEDLNALLAAKKHLEDNGVKVLGITNHGI FHSIYFFDPNGHRLELTYNDAHAEEKIAKITEEMKTEMLEEWSKTKRAPHHTHFLHEEEL GA >gi|333032591|gb|GL891835.1| GENE 42 43966 - 44745 784 259 aa, chain + ## HITS:1 COG:RSp0704 KEGG:ns NR:ns ## COG: RSp0704 COG1414 # Protein_GI_number: 17548925 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 8 258 46 297 311 139 32.0 5e-33 MIEEKISGGVQSLEVGLSVLNALLEHNQPIILKDLSSKLEMHPAKVHRYLVSLIRMDYAK QLEDGQYALGDQAWRLGLNCIQHSDTLQLVQHLIYDLQSKIGCGIQISKWSPKGPVVVQS IESNHPISIVTKVGSIMPLVNSAAGRLFASYLPEHFVRPLLETEWQKHQELGLNIAPHNW EEFLELKETIRQQQMSAAKGDLLTGINAVGLPVFNSNQGIEFCIVALDSEMFLPVDPQSK IIETLKNEINSINQYIKSR >gi|333032591|gb|GL891835.1| GENE 43 44810 - 45865 1304 351 aa, chain - ## HITS:1 COG:RSc3103 KEGG:ns NR:ns ## COG: RSc3103 COG3185 # Protein_GI_number: 17547822 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: 4-hydroxyphenylpyruvate dioxygenase and related hemolysins # Organism: Ralstonia solanacearum # 5 350 7 363 367 377 54.0 1e-104 MDILENPLELCGFAFIEFVSKENELDPIFETIGFSKVAKHKSKKAYLWRQGNINIILNYQ PESYASFFFNEHGPSACAMGFKTRDAAKAFKKAVELGAEPMYSKVGPMELNIPAIKGIGG MPIFLVDRDIYENDFVFFDDAQRNPEGAGLKEIDHLTHNVYKGRMEYWANFYEKIFNFQE IRYFDIKGEYTGLTSKALTAPDGMIRIPLNEDSDKGNGQIAEFLADFNGEGIQHIAFICE DLISTWDKLKGLGLKFMTPPPNTYYEMLEERLPEHGEPTEELKQRGILLDGSTKDGQKKL LLQIFSENMIGPVFFEFIQRKDDDGFGEGNFKALFESIERDQIRRGVLEAK >gi|333032591|gb|GL891835.1| GENE 44 46388 - 46858 534 156 aa, chain + ## HITS:1 COG:BH2059 KEGG:ns NR:ns ## COG: BH2059 COG1683 # Protein_GI_number: 15614622 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 1 153 1 150 161 181 57.0 5e-46 MLLISACLIGEPVRYDGRSCSHTTLKQLFLNKKAHALCPELLGGFTTPRLPAEIVGGTGQ DVLDGKAKILDSSGLDVTELYLKGAYRTLDIARQIQATCVVLKENSPSCGSQKIYNGTFQ GEKITGVGITTALLQRHGFEVISENEIEEWLTAHPL >gi|333032591|gb|GL891835.1| GENE 45 46879 - 48222 881 447 aa, chain - ## HITS:1 COG:NMB0812 KEGG:ns NR:ns ## COG: NMB0812 COG0534 # Protein_GI_number: 15676710 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Neisseria meningitidis MC58 # 7 440 23 447 459 131 25.0 3e-30 MNQIFKLFIPMLSSNLIVVLSGLIDIAYVGHFSNDHVAALSVTLSLYTVVYVIGMGILQG VMLKLSEAYGCHDIPRIRQIFIQGVWLMLGSALVSIALLYLFRDLPKLFGASEHVVSITK NCIWALVFILPAHLLMRLFTALSQVTENAYKVLLSDSLFFILKIILSYLLIYGVALFSIP PLGAIGALLATIIVRWFMLVVYYLFFLEKKYIFIEHPERSVEDSWQSLRMILKIGIPTAI MALMDVIAFCSVAILILPFGSVVSAAHQIVASTGGFMFIFPSSIASAYSILVSRTMGSGN MKEADKIARQSIWVIMAVSGSLSLCLWVERGLIVTFYSDDLAVQILAASLLLIVCMSHFL DGLMTLLTSLLRCWDVSILPMLIFLVVVLCFGLGGGWWMAYKGLHWGSHSISAMGIYGFW SMAAISYLVACVLSAFCFRFRKQLRGF >gi|333032591|gb|GL891835.1| GENE 46 48401 - 49339 849 312 aa, chain - ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 312 1 310 321 318 57.0 9e-87 MSALLRFTQFVQKTFALWVIIFAALALWQPEFFVWLKAYIPWILGIIMLGMGMTMTVDDF KGVLQSPKAVLIGVVAQFVVMPGLAFILCKLFNLPPEIAVGVILVGCCPGGTASNVITYM AKGNVALSVACTSVSTLLAPVLTPAIFYLLASQWLKIDAASMFISILQVVLLPIVIGLIL RTWLKRQVESYIQVMPLVSVIAIVAIVAAIIGGSKAAILQSGLLILAVVILHNGLGYLLG FAAARFFKLPYADSKAIAVEVGMQNSGLGVALAAVHFAASPITAVPSAIFSLWHNISGPA LATYWASKHKQE >gi|333032591|gb|GL891835.1| GENE 47 49394 - 50032 623 212 aa, chain - ## HITS:1 COG:RSc1760 KEGG:ns NR:ns ## COG: RSc1760 COG1335 # Protein_GI_number: 17546479 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Ralstonia solanacearum # 10 210 9 209 210 275 63.0 4e-74 MNKQPQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGCFENVVLTQDWHPDNHIS FAANHPGKQPFETIELDYGSQVLWPKHCIQGTHDAEFHPDLNIPTAQLIIRKGFHAHIDS YSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIEDACK GIDLNGSLEQAWQTMQQQGVIRIQSTDLLNEC >gi|333032591|gb|GL891835.1| GENE 48 50368 - 51261 1039 297 aa, chain + ## HITS:1 COG:PA1010 KEGG:ns NR:ns ## COG: PA1010 COG0329 # Protein_GI_number: 15596207 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Pseudomonas aeruginosa # 8 297 2 291 292 353 61.0 2e-97 MTQQAQTIQGSIVAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSME EHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKPTQEG LYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGDVPRGKALI DALNGKMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNN KIANLHNILFCESNPIPVKWALHEMGLIDTGIRLPLTPLAEQYREPLRNALKDAGII >gi|333032591|gb|GL891835.1| GENE 49 51277 - 51879 650 200 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000059 NR:ns ## KEGG: ABBFA_000059 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 200 2 201 201 367 100.0 1e-100 MQLRLGLVLAVSALSLAGCGRFALNNHSLDYKNAKQLAPLEYPADATVRPATPLYPAPTV DQLAIDHAPKFENKRGNRFALPRPEPLQTDTTADASAQTGSALGRPQLVTDGNKNPLLKI DGSTAEIWQYTKATLSTLNYNVIAQGNNQATIKVNDNTYVLKLTGVGSSHSLALFNPDNT FASPDVAAEVLNQIYQNWPA >gi|333032591|gb|GL891835.1| GENE 50 51917 - 52636 1078 239 aa, chain + ## HITS:1 COG:PA1013 KEGG:ns NR:ns ## COG: PA1013 COG0152 # Protein_GI_number: 15596210 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Pseudomonas aeruginosa # 1 236 1 236 236 348 72.0 6e-96 MLKQTLLYTGKAKSVYETDNADHLILVFRDDASAFNGEKIEQLDRKGKVNNRFNAFIMEK LAEAGIETHFEKLLSPTEVLVKKLQMIPVECVIRNYAAGSLCRRLGVEEGKELTPPTFEL FYKDDGLGDPMVNESQAIALGWATAEQLEQMKVLTYKVNDVLKALFAEGNMILVDFKLEF GVFHDRIVLGDEFSPDGCRLWDKDTKKKLDKDRFRQGLGGVVEAYEEVAARLGVDLSDI >gi|333032591|gb|GL891835.1| GENE 51 52824 - 53027 247 67 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000057 NR:ns ## KEGG: ABBFA_000057 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 67 1 67 67 132 100.0 5e-30 MELFKPEKRLMNHPIHFGENPLVILSNFSHSALKQGWSQAEVETVISEASQGDYMKLIRT LRAYTLF >gi|333032591|gb|GL891835.1| GENE 52 53312 - 54151 690 279 aa, chain + ## HITS:1 COG:PA2777 KEGG:ns NR:ns ## COG: PA2777 COG2116 # Protein_GI_number: 15597973 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Pseudomonas aeruginosa # 14 276 55 317 318 187 37.0 3e-47 MDHELEEEKVDQTLSWREKMAVEEHEKLSPRLVYEIIRRDGAEELDRPTAALIFSGIAAG LVISFSFVFKAIIASYIPTDAIWTDLITNFGYTIGFLIAILGHMQLFTENTITTVVPLFK PFTLDKLRAVGRLWGIVILCNIIGTALASLFFLTTDLFTPNIDKALDELAHHVASFSAIQ NLLKGVMSGLLIAALVWMLPSVSNKFLVIFFMTYLIGLGDFTHVVVGSTEMSYLVWQGEA SLGEYLFNFLIPTTIGNIIGGTGVFTLLIYGQVTEELEQ >gi|333032591|gb|GL891835.1| GENE 53 54166 - 55431 1406 421 aa, chain - ## HITS:1 COG:CAC0326 KEGG:ns NR:ns ## COG: CAC0326 COG2256 # Protein_GI_number: 15893618 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Clostridium acetobutylicum # 5 406 14 422 443 366 48.0 1e-101 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL LLAQAIDRPFVSLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLGAVEK GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDSEAIQTLLNNALQNDKFLKERYIHIE EYDALLQFAAGDARKALNLLDLIASTFEPEVENTITNAIVVKVAQQNIARYDKSGEQHYD LVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC FRSVQAVGMPEARIILGQTAVYLATSAKSNSTYLAINKALELAEKTANLPVPLHLRNAPT KLMKQQGYGINYLYPHDYPEHFVLQDYLPPELKGTKLYESARNKREVEGERLQQRRWQQE Q >gi|333032591|gb|GL891835.1| GENE 54 55537 - 56706 1209 389 aa, chain - ## HITS:1 COG:SMb20301 KEGG:ns NR:ns ## COG: SMb20301 COG2133 # Protein_GI_number: 16264039 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Sinorhizobium meliloti # 55 384 46 372 376 270 44.0 3e-72 MRRLAAPLLCSSFFLLMACGSNNTNSKNPEQNTTAKTEQTSAAKQTYQVEAVAHFNEPWA ITSLPDQRLLVTERQGKLKIFNPQNKQMLNVQGIPAVSYGGQGGLGDVALHPDFAKNHWI YLSYAAKGQGGSGAVISRAKLDLSNPNQPKLTDIKQIWQQVPKVSGQGHYGHRMLFGADG KLWVSSGERQKFDPAQNMKSNLGKILRLNDDGSAALGNPFYEQGGVTAEIWSLGHRNLLG MAFDRKGQLWVVEMGPKGGDELNIITKGENYGYPIVSNGDHYSGQPIPDHHTRPEFKAPE IDWTPVISPSSLIIYHGQQFPAWQNKALIGGLSSEAIVVVDLEHKPVKEVQRLEMKQRIR GLHEAQDGSIWVIEDGPNARLLKLSKKPS >gi|333032591|gb|GL891835.1| GENE 55 56819 - 57277 358 152 aa, chain - ## HITS:1 COG:PA1299 KEGG:ns NR:ns ## COG: PA1299 COG2983 # Protein_GI_number: 15596496 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 11 148 8 145 149 155 55.0 3e-38 MSTETSLRPLFWKNYTLEQLTQAEWEALCDGCGLCCLVKLEDEDTHEVAYTKVACKLLDC NTGRCSDYPNRQQQVPDCLQLTPETLKTIHWLPSSCAYKRLNEGKNLPSWHYLNTGSRQS VVKAKKSVAGRCIPETDVHEDDIEDYVVRWVR >gi|333032591|gb|GL891835.1| GENE 56 57472 - 57630 277 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|262377122|ref|ZP_06070347.1| ## NR: gi|262377122|ref|ZP_06070347.1| predicted protein [Acinetobacter lwoffii SH145] predicted protein [Acinetobacter lwoffii SH145] # 1 51 40 90 91 66 90.0 6e-10 MFRWAIIFAVIALIASLLGFGGVAGLSKDFAVILLVIAVILAVIGFISRGRT >gi|333032591|gb|GL891835.1| GENE 57 57802 - 58539 1045 245 aa, chain + ## HITS:1 COG:PA1166 KEGG:ns NR:ns ## COG: PA1166 COG0412 # Protein_GI_number: 15596363 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Pseudomonas aeruginosa # 1 241 16 256 262 211 44.0 8e-55 MSTAIKTREIQYTAPDGSHLIGYFAAPESETPVPGVIIGPEWWGRNEYTEQRARELAEHG YAALAIDMYGDKKVTTTAAQAYEWMMQTFEDLDTVTDRANAGLQTLAAQPEVNSEKLAAV GFCYGGKVVLDLARSGAPLKATATFHGTLAPKAPAQKGNIQGEVLVLHGELDSMVTLEDV ANFEKEMQAAEVKHEVVVLKDAKHGFSNPLADERAKANGVDLGYNSEAEKQGLAKMYALL ERTLK >gi|333032591|gb|GL891835.1| GENE 58 58724 - 59086 465 120 aa, chain + ## HITS:1 COG:CAC1608 KEGG:ns NR:ns ## COG: CAC1608 COG0537 # Protein_GI_number: 15894886 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Clostridium acetobutylicum # 1 105 1 105 122 87 37.0 5e-18 MTDKKCPYCDFDEYDIIDKNEFAVILPDPNPLSKGHCVVTPLRHVSSFFDITSKEHQGLL TLLEIARHETQLRHQPDGFHIGFNDGEVFGQTSDHFHIHVIPYYKNQPLKLDQRWGVQKD >gi|333032591|gb|GL891835.1| GENE 59 59228 - 60262 701 344 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229845805|ref|ZP_04465917.1| 50S ribosomal protein L31 [Haemophilus influenzae 7P49H1] # 6 307 11 312 378 274 46 1e-72 MPEFSFSDALLNWFDQHGRHDLPWQVADDPYKVWVSEIMLQQTQVKTVLQYFDRFMERFP TVEALGYATWDEVAPYWAGLGYYARARNLHKAAGLVAQQGKFPETLEEWIALPGIGRSTA GALMSLGLRQYGVIMDGNVKRVLARFFAIEDDLSKPQHEREMWKLAEELCPTQRNHDYTQ AIMDLGATICTPKKPLCLYCPMQAHCQAYQQGLEQELPFKKPKKTPPVKTADVLIIQCED EWFWQQRQAHGLWGGLFCLPILENEHERLKLSQQFKLQPQPQTFQISHSFTHFTWLLNAH VFHVELDQKEHLAIELEGQWLSPEQAIAKGVPTAMKKLISTSRS >gi|333032591|gb|GL891835.1| GENE 60 60310 - 60846 530 178 aa, chain + ## HITS:1 COG:DR0598 KEGG:ns NR:ns ## COG: DR0598 COG0739 # Protein_GI_number: 15805625 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Deinococcus radiodurans # 1 177 22 192 197 131 44.0 7e-31 MRRLVSHLSLGFLIILLAACASAPKKPAPLSPAQVSKLKSMQLPSRLPVPVKGVDRDELK DTWGAARSQSRSHEGIDILAPRGTKVYSATEGLIADLRNNNLGGKVIWILGPAGTWHYYA HLDGHKRGLNVGDYVKKGDLIGYVGNTGNARYTSPHLHYGLYLDGKGRGAVNPYSYLR >gi|333032591|gb|GL891835.1| GENE 61 60856 - 61101 301 81 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000047 NR:ns ## KEGG: ABBFA_000047 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 81 1 81 81 153 100.0 2e-36 MSEALINRLVEFAESGNQQKIILNGNSYQGWIMEISDDALLISTGFSDKVGKDFWLKFED LTQAELYYWDTRPNEWVPFKL >gi|333032591|gb|GL891835.1| GENE 62 61132 - 61692 345 186 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164512|ref|YP_001467500.1| 50S ribosomal protein L24 (BL23; 12 kDa DNA-binding protein; HPB12) [Campylobacter concisus 13826] # 4 181 2 179 185 137 38 2e-31 MKTQRCGWCSDDPLYIAYHDEEWGKPEHDEARLFEMLCLEGQQAGLSWITVLKKRESYRQ HFFNHPIADIAAFTDDFLETKLSDASLIRHLGKLKAIRDNAIAWQALKAQVGDVSKWLWQ FVDAAPQNNDVADYRKAPAQTELSLKLSKTLKKNGFKFVGPTTCYAFMQAVGMVNDHEND CQFKAS >gi|333032591|gb|GL891835.1| GENE 63 61731 - 62759 1217 342 aa, chain + ## HITS:1 COG:ECs5241 KEGG:ns NR:ns ## COG: ECs5241 COG1064 # Protein_GI_number: 15834495 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Escherichia coli O157:H7 # 6 340 18 353 353 409 62.0 1e-114 MSNNTIQAYAAMQAGEKLVPYQFDAGELQPHQVEVKVEYCGLCHSDISVLNNEWRSTVYP VVAGHEIIGRIVALGSEAKGLQIGQRVGIGWTAESCQACDECIGGQQVLCTGENVATIVG HAGGFADKVRAGWQWAIPLPEDLDPESAGPLLCGGITVFDPLLKHKIQATHHVGVIGIGG LGHIAIKLLKAWGCEITAFSSNPDKTEELKAMGADHVVNSRDTEAVKAQKGKFDLLLSTV NVTLNWRAFISTLAPNGSLHFLGLTLEPVPVSVGSLIDGAKSVTGSPTGSPAALRQLLKF AARKKIAPQIELFPMSQLNEAIERLHSGQARYRIVLKADFAE >gi|333032591|gb|GL891835.1| GENE 64 62762 - 64186 1149 474 aa, chain - ## HITS:1 COG:PA4132 KEGG:ns NR:ns ## COG: PA4132 COG1167 # Protein_GI_number: 15599327 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pseudomonas aeruginosa # 4 463 3 463 471 271 34.0 1e-72 MTFQYQVLANQLAHRIYQDELKPHQKLISLRDFARQQGISLSTAKSCYELLEARGLIYVK PKSGYFVVARTPSSPIPDSPDFLSLPRHVSNLELHNQIQEAALQSHLVPLGSIQLTPHFI PVEGLRRSIQRALKNCQPQDFLYCNKQGHEQLRKALSDHWREDGIYIAPEDIFITNGCMP ALSLVIQKLTEVGDSILIPTPTYNGHLQLLASLKRQIVEIPADHRGIDLERLESLMQQGL AKVCLMTANYQNPLGYCFSNAEKQKIAELAAKYQCFIIEDDIFGECGYSSERPLPIRYWE REGYVIWCGSVSKSLSSAYRVGWFCLTTKLEHLKLELLVSNIGVNTPLQLGLADFIYSRA YREHLEQLRPNLMRQVEEYRSCILRAFEGIPIALSQPEGGYALWIQLPKSVDSLALYYTA QAQGITVVPGHVFGEDERYRHFIRLNAGHELTADVRQAIMSLADWSRQQMQTVS >gi|333032591|gb|GL891835.1| GENE 65 64277 - 64651 333 124 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3628 NR:ns ## KEGG: ABSDF3628 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 124 11 134 134 213 96.0 2e-54 MKLKVILLFTIVLAGCQPQPKNEQHRHTVCQSLIEGYLKMTNQQDYKMEQRTDDETSAIS HYQYKRNSSNEVVMVNSVYSKLYFSCQEQQKSYFLSQHSAEGQTTPILEVHIPTDSYTTF RERF >gi|333032591|gb|GL891835.1| GENE 66 64635 - 65537 778 300 aa, chain - ## HITS:1 COG:PA1859 KEGG:ns NR:ns ## COG: PA1859 COG0583 # Protein_GI_number: 15597056 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 292 1 293 295 279 48.0 5e-75 MKSTIEELVAFITIVDTGSFVAAAEHLKQTPSGVSRSLTRLEAKLDVTLLERTTRKLKLT QEGQQFLIKARKILNELNAAEEELQKSDQGTAGLIRVDSATPFVLHVIAPLMHKFRECYP DIEIELNSNDQVIDLLQHKTDVAFRFGELNDSSLHAKLVCESHLYIVASPDYLALKGTPT QPEELEQHDLIGFTRPTYINSWPIKVGDEYFFAQSKIKASSGETVRQLTIRGHGIARLSE FEIWKDMEEGRLIALFEDKIEHQYQSIHAVYYQQEHLPKRIRLFIEFLAEQLKDGFKNAL >gi|333032591|gb|GL891835.1| GENE 67 65658 - 66461 1060 267 aa, chain + ## HITS:1 COG:PA4167 KEGG:ns NR:ns ## COG: PA4167 COG0656 # Protein_GI_number: 15599362 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Pseudomonas aeruginosa # 3 267 8 272 272 355 66.0 7e-98 MNIPRFGLGTFRLKEQAVIDSVKNALDVGYRAIDTAQIYDNEAAIGQAIAESGVSRQDLF LTTKIWVDNFAQDKFIPSLKESLQKLRTDHVDLTLIHWPAPDLGVSIPEIMQLLLEAKQQ GLTKQIGISNFNIALTQQAIDTIGVEHIATNQIELSPYLQNHKLVNFLQEKNIDVTSYMT LAYGKVLQDPVLAEIAAAHKATTAQIALAWALQRGFAVIPSSTKRENLISNLKAQDIELT AAEMQMIAELDRNSREVSPEPWAPVWD >gi|333032591|gb|GL891835.1| GENE 68 66466 - 67656 1173 396 aa, chain + ## HITS:1 COG:ydhP KEGG:ns NR:ns ## COG: ydhP COG2814 # Protein_GI_number: 16129615 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 9 384 5 380 389 398 67.0 1e-111 MNTQSNTAFSLLALAIGAFAIGTTEFSPMGLLPNIANDLGISIPTAGMLITGYALGVMLG APFMTLWFGGFARRNALIFLMAIFTVGNLIAAFSPNYMSLLGARLITSLNHGAFFGIGSV VAASIVPAHKQASAVATMFMGLTIANIGGVPLATWVGQNIGWRMSFLAISVLGIITMLAL WKALPQGMVAQKPNVKAELKVLTRTPVVLALLTTVLGAGAMFTLYTYIAPSLTEFTHASP TFITFMLVLIGVGFSIGNHLGGRFADLSINKTLIGFLVLLIVMMVTFPILAQSQIGAAIA LVIWGAATFALVPPLQMRVMSVAHEAPGLASSVNIGAFNLGNAVGAAAGALVLDLGWGYS AVSFAGALLAGLGLLLVLFQIKRESSPAQTLQQCSD >gi|333032591|gb|GL891835.1| GENE 69 67697 - 68350 656 217 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000039 NR:ns ## KEGG: ABBFA_000039 # Name: not_defined # Def: START domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 217 1 217 217 394 100.0 1e-108 MNKKQIALTTLLCLSSLYTGAASTDKAKLSLDRNHIKVWTYQKADNPVFQYKAETTFDVP LERAVAVILDVDRAAQWVPYMGKVQMLSQDEKKGEFTLYMVLDFPFPLKDRDVVVKGKMS KAANGLITIKNTAVNSNYPIQPDVVRLTRYEGDWTFQKLANNKVKVTTSGYADPAGAIPL SFVNMFVQQQPYQMLLKMKREVMNPIYEQPKLPEILK >gi|333032591|gb|GL891835.1| GENE 70 68402 - 69223 1081 273 aa, chain - ## HITS:1 COG:PA4759 KEGG:ns NR:ns ## COG: PA4759 COG0289 # Protein_GI_number: 15599953 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Pseudomonas aeruginosa # 6 268 3 267 268 311 63.0 8e-85 MSAAPRIGILGAGGRMGRTLIQAVQQAGYQLAAAVERPESSLVGTDAGELAGIGSVGVRV SGSLADVLKDCDVIIDFTAPAATSEHLKLCREAGVAIVIGTTGMSDEQKAELDETAKHIP VVYAANYSVGVNVSIKLLELAAKVFGDTVDIEVIEAHHRHKVDAPSGTALMMGEAIADTL GRNLKEVAVYGREGHTGPRDRQTIGFETIRGGDIVGEHTVMFIGEGERVEVTHKATNRMN FAAGAVRAAAWVVGREARKYDMKDVLGLNDVQV >gi|333032591|gb|GL891835.1| GENE 71 69408 - 69758 430 116 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000037 NR:ns ## KEGG: ABBFA_000037 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 116 1 116 116 145 96.0 8e-34 MHSKIIGLTAIMGIISSVAFAEPAIQPGETLESLSKARITTNVNTQAATPTAQTSDANAE VKVEDIDPIIKEKTEETLKAAVQPAPQATVEAIVAPVASSELNVSVDDIDVAHPTE >gi|333032591|gb|GL891835.1| GENE 72 69873 - 70985 1331 370 aa, chain - ## HITS:1 COG:STM0013 KEGG:ns NR:ns ## COG: STM0013 COG0484 # Protein_GI_number: 16763403 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Salmonella typhimurium LT2 # 1 370 1 375 379 421 60.0 1e-117 MAKRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEEKFKEASEAYEILSDS EKRSMYDRMGHNAFEGGFGGAGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQRQRRGSDL RYVMELTLEEAVKGVKKTITFTAPAPCDVCDGKGSKNPKDVETCKTCHGSGQVRMQQGFF SVQQTCGTCRGQGKIIKNPCHACHGSGVADRQQTLEVTIPAGVDNGDRVRLSGKGEAIRD GQAGDLYVEVVVREHEIFQRDGADLYMDVPVSIADAALGKEIEIPTLEGRVSLKIPEGTQ TGKLFRLRGKGVRPVRSSMVGDLLCRIVVETPVNLTSRQRELLKELQASFDGEDSASSPK KKSFFDRLFD >gi|333032591|gb|GL891835.1| GENE 73 71090 - 71467 443 125 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000035 NR:ns ## KEGG: ABBFA_000035 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 125 1 125 125 184 100.0 1e-45 MGQDHIEQHRRYIVISYAFMFLALFTVIFAAFAYLVARKVAVVDDAEVWIHAHALWIMRN GILFLLMSVFAVVWFIPLFFFAWDSNLWVTASTVAGVVFSAIAWLFLLNAWLKGLSKYLK NKAVF >gi|333032591|gb|GL891835.1| GENE 74 71607 - 74732 3273 1041 aa, chain - ## HITS:1 COG:PA3676 KEGG:ns NR:ns ## COG: PA3676 COG0841 # Protein_GI_number: 15598872 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 1 1039 1 1020 1025 1377 66.0 0 MKFNLSEWALNNKGIVLYFMLLLGIIGAISYSKLSQSEDPPFTFKVMVVQTYWPGATAKE VSTLVTDRIEKELMTTGQYDKIMAYSRPGESMVTFVAKDSLTSAQIPDVWYNVRKKVNDI RHELPSGVQGPFFNDEFGDTFGNIYVLTGKDFDYALLKEYADRLQLQLQRVKDVGKVELI GLQDQKIWIEISNTKAVQLGIPVSAIQEALQKQNSMASAGFFETGTDRIQIRVSGQLQSV EDIKKMPLLVGDKTIQLGDVADVYRGFSQPAQPRMRFMGDNGIGIAVSMRKGGDIIALGK NLETEFAQLQKTLPLGMKLQKVSDQPVAVQRSIHEFVKVLAEAVIIVLLVSFFSLGFRTG LVVAFSIPLVLAMTFAGMNLFDVGLHKISLGALILALGLLVDDAIIAVEMMAIKMEQGYS RIKAAGFAWKTTAFPMLTGTLITAAGFLPIATAQSSTGEYTRSIFQVVTIALLVSWVAAV LFVPYLGEKLLPDFTKTGHQAPWYVRLWARITKKPQPQTVAISQDHHYDPYQSSFYLRFR KMVEFCVTYRKTVIATTVGIFVLSVLMFKMVPQQFFPPSNRAEILVDLKLEEGASLTATE QAVKKVEQFLSKQKGIDNYVAYVGTGSPRFYLPLDQQLPQASFAQFVVLASSLDDRDEIR RSLETQIKQLLPQVRTRVSLLENGPPVGYPLQYRVSGEDLNLVRKEAQQVARVISENPNT TNVHLDWGEPSKIISIQIDQDRARQMGVSSVDLANFLNASITGSAIEQYREKRELIEIRL RGDKAERVEVASLASLAVPTANGTTVPLAQIAKIEYKFEDGLIWHRNRLPTITVRADIRT NLQPATVVGELAESMDKLRAELPSGYLIEVGGTVEESARGQSSVNAGMPLFLAVVMTLLM IQLKSLSRATIVFLTAPLGLIGVVLFLLLFNKPFGFVAMLGTIALSGMIMRNSLILIDQI EQDRQAGHPTWEAIIDATVRRFRPIILTALAAVLAMIPLSRSIFFGPMAVAIMGGLIVAT LLTLFFLPALYAAWFKVKKTA >gi|333032591|gb|GL891835.1| GENE 75 74735 - 75835 1088 366 aa, chain - ## HITS:1 COG:PA3677 KEGG:ns NR:ns ## COG: PA3677 COG0845 # Protein_GI_number: 15598873 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 8 362 7 363 367 287 43.0 2e-77 MNLLKPLIMSMMIVCMVTLTGCSKEAPKTEEIPYVMVTQPSTTLHEQKSYAGDVQARQQT ALAFRVGGQVTARYVDVGDRVRVGQVLAKLDVADAQLQLNAAKAQLDNAQAAAKTASDEL KRFQQLLPINAVSRSQYDTVKNQYDAAQAALQQARSNYEVSANQTGYNQLVSNKNGVITA RNIEIGQVVAAGQAAYQLAIDGEREVVIGVPEQAVSEIKVGQAAWITLWSKPNERFAGYV REVSPAADQSRTFTVKVALKEGQSAIQLGQSARVFFSSTQTNVMSVPLSSVSATDNQPYV WVVNANQTLRKVPVTIGAYGRDSVPVLSGLTPNDWVVIGGVHLLRDKQKIHPIDRENRAV KIQGAK >gi|333032591|gb|GL891835.1| GENE 76 75985 - 76608 348 207 aa, chain + ## HITS:1 COG:PA3678 KEGG:ns NR:ns ## COG: PA3678 COG1309 # Protein_GI_number: 15598874 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 202 11 205 212 108 33.0 7e-24 MQTVNQSGRPKDLEKRARILQAAKAIFLKSGYHGTSMNLIAQEAGVTKLTVYNHFQDKAN LFICAITETCEETLGTKPFELDASADFYQTLYMVCSRALQIIYSPEALKLEHVLFELAAE QSPLALQFFDASHTRLQNQLVEFFQKAAQLGFIQADDPLYQTELLLTLLLGVRHHKVLLR IIPVPNAQEIDRFIRDAIDLFLIRYRH >gi|333032591|gb|GL891835.1| GENE 77 76779 - 79463 2915 894 aa, chain + ## HITS:1 COG:YPO3929 KEGG:ns NR:ns ## COG: YPO3929 COG2352 # Protein_GI_number: 16124059 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Yersinia pestis # 7 894 6 878 878 860 51.0 0 MVQQIDAPLREDVRLLGNLLGETLKQHAGQELFNQIEQIRALAKGARDGQAEAEKQLEQL FLELPDEELLPLTRAFSHFLNFANIAEQYHVVRSRRQAEFDPDANSPNPLVHLFKKFKDK NISTEKLFQQICDLKIELVLTAHPTEVSRRTLIQKYDDINACLSQLDQQKLTPRERQNAL ANLKQQISSAWQTDEIRQHRPTPVDEAKWGFATIEQTLWNAVPKFIRELNELVQDNCQQN LPLHIAPVRFASWMGGDRDGNPNVTHQITQEVLWLSRWQAADLYLRDIENLRWELSIQSC SEEMVQAIGSPHPEPYREYLRATRERLKATRHWLAQRLQGLEADDSNVIKSKDELLQPLL LCYRSLIDSNLPEIANGQLLDFIYRVNCFGIELLKLDIRQESGRHRQAISAITEYLGLGN FESWTEQARQNFLIQELQSKRPLLPKYINEPEGSLIGHPDVQEVFATMRTLADQPPESLG AYIISMAEYPSDVLAVLLLQKEAGIQHPLRVVPLFETLKDLDGAATTMNTLFNMHWYKQH IQGKHEVMIGYSDSAKDAGFMSANWAQYRAQEELTAIARKHGVQLTLFHGRGGSISRGGA PTQQALFSQPPGSISGAIRVTEQGEMIRFKFGLEGIAMQNLEIYTAATLEATLLPPPEPK AEWRELMNRMTDHSVKVYRQTVRENPHFVKYLRTVTPELELQMLPLGSRPAKRKVSGGIE SLRAIPWVFAWTQIRLMLPAWLGTGAAINEVIADQQKATLDEMLQQWPYFQTLIDMLEMV LSKADANIALYYESHLTEDEDLKVLGNQLRQRLKDAVETLLALKDESKLLSDNEVLDQSM QVRKPYLLPLHLLQAELMKRRRDYLAERQAEHTPVDHALMVSIAGIAAGLRNTG >gi|333032591|gb|GL891835.1| GENE 78 79764 - 81059 742 431 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 20 431 5 424 447 290 37 2e-77 MSNWFPKWQPYQGDVDHRPVSTNEYLPPVQSAILGIQHAFAMFGATVLAPLLMGFNPNLA ILMSGICTILFFLITGGRVPSYLGSSFAFIGVVAAATGHITGSGANPNLSIALGGIVACG IFYALIGFIVMLTGTRWIEKLMPPVVTGAIVMIIGLNLAPVTIKGVAGQPFEMWMALITV LCMGSIAVFTRGLLQRLLLLVGLILAYVIYAIATNGLGLGKPIDFSQISQASWFGIPSFS HPTFDTKAILIIAPVALILVAENLGHIKAVGAMTGENLTPQLGKAFVADGLATTLSGSVG APGMTTYGENIGVMAVTRVYSTIVFVIAGIFAIFLGLSPKFGAVISTIPSAVLTGASIVV FGLITIAGAKIWIENKVDFSNNKNLIVASVTIILGAGNFELLFGNFNLGGIGTATFAAII LNWLFSLKDKT >gi|333032591|gb|GL891835.1| GENE 79 81139 - 82029 737 296 aa, chain + ## HITS:1 COG:RSp1267 KEGG:ns NR:ns ## COG: RSp1267 COG0583 # Protein_GI_number: 17549486 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 291 1 291 294 202 37.0 8e-52 MRFDFFDLQLVLHIVSTGSLTKGADRSAISLQAASERIKKLEQYFETPLFIRQTTGVELT TAGHAFVEHARQLLAQKDQLEQEMQRFRQPTTEALTLWCNSSAQSEYLPTLLPQYLVLHP EMNIDLHEAESSEIVDALTQGIASLGLVSSFFNTRHLQTKEFASDPLVLICPVTHELAHY KELNLVDALSYGFIGLKSHHSLQQSIETQAKLLGFNIQYRLRLPNFGAIAEVVAKGVGIA IMPARAAQRLQLDYDFHSIQLLGAWANRKLLLATQSFNQLPSSYQQFADFLLQHRP >gi|333032591|gb|GL891835.1| GENE 80 82038 - 82769 602 243 aa, chain - ## HITS:1 COG:mll2193 KEGG:ns NR:ns ## COG: mll2193 COG0730 # Protein_GI_number: 13472029 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Mesorhizobium loti # 4 242 7 245 249 174 45.0 1e-43 MTFLAIIMMVFAFAGMVKGMIGLGLPAVSMGLLTIAMSPFQAASLLIVPSMVTNVWQLFA EGHVWAFIRRFWTLLAGIVVGSIWSFLPTLSQSHGQSSEILLGCMLALYGLYGLCVKKLP HLGKHERWLSPIIGYIGGAVTVATGVIIIPIVPYLQSLHLKRDELVQALGLTFTVSTICL AVFLHHNPMSGITLDYRLSFAALLAALIGMWIGKKIRYRLNEQIFRRIFFIGLMSLGLYM ILH >gi|333032591|gb|GL891835.1| GENE 81 82848 - 84137 1019 429 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000027 NR:ns ## KEGG: ABBFA_000027 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 429 1 429 429 828 100.0 0 MSLLRRWFDPIRSSWFYQKPSRQAVLPTENGLSIYLRLDDVYSYLAVQQLSQLDEILSDE LKPLKIIISHTASEPPNSMTHEEWQHYCLNDAKILANQHRFAFDEFPEIPSPESLKQAAV ILKRTPLQGQNFLHLLEDIFHMLWQQQYGKLRTLHAMAVKHQVPQHFPERIFTDEPVRAA YFEFGGRKYHAVDDLLRLTRRLKQQKLLTGNPIFLINHIEWREHLINDAEALNEIQALHP ELDVFIALEDPMSWLLLAYIKEELADYYDIQLKVYPLSYRGRDWFDWSLATRVSKRTEVA FTPFCRPTEESTLGMAKLFYSVPENQQLDTIFTILQAVWTKGKDLSFQKHFQQLQQQLGI EQLTEQDIQSVLAQNDALCQDKHQPDLPVLELRIDGQSYVFNSLYRVWMIESIFSNVLEE KYKTASTSN >gi|333032591|gb|GL891835.1| GENE 82 84451 - 86280 2151 609 aa, chain - ## HITS:1 COG:SMc04045 KEGG:ns NR:ns ## COG: SMc04045 COG0129 # Protein_GI_number: 15966581 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Sinorhizobium meliloti # 1 609 1 609 612 978 79.0 0 MPDYRSKTSTHGRNMAGARGLWRATGMKDEDFGKPIIAVVNSFTQFVPGHVHLKDLGQLV AAEIQAAGGVAKEFNTIAVDDGIAMGHDGMLYSLPSRDLIADSVEYMVNAHCADAMVCIS NCDKITPGMLMAAMRLNIPVVFVSGGPMEAGKVKFRGDEKAIDLVDAMVVAADDSYTDEE VAEFERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGSIVATHANRKKLFLKAGQLIV ELAKRYYEQNDASILPRSIATKAAFKNAMTLDIAMGGSTNTVLHLLAAANEAEVDFTMDD IDELSRRVPVLSKVAPAKQDVHMEDVHRAGGIMAILGELDRANLLDVSVPTVHEKTLKDA LDKWDIIRTEDPDVYEFYRSSPGGVPTQVAFSQNRYYSTLDGDREKGVIRNAEHAFSKDG GLAVLYGNIALDGCIVKTAGVDESILKFTGSARVFESQDAAVEAILGNEIKAGDVVVIRY EGPRGGPGMQEMLYPTSYLKSKGLGKDCALVTDGRFSGGSSGLSIGHVSPEAAEGGAIGL VEDGDTIEIDIPNRTIHLNIDDATLAHRRTVQEAKGWHPKEERKRKVSKALKVYAMHTTS AAKGAVRVL >gi|333032591|gb|GL891835.1| GENE 83 86629 - 87591 993 320 aa, chain + ## HITS:1 COG:VC0045 KEGG:ns NR:ns ## COG: VC0045 COG0223 # Protein_GI_number: 15640077 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Vibrio cholerae # 1 307 5 300 315 320 55.0 3e-87 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV AFIQLDENNALRVWNSTISNQNKADAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK ALNAQQIAQTQKLHVGQILP >gi|333032591|gb|GL891835.1| GENE 84 87588 - 88892 1102 434 aa, chain + ## HITS:1 COG:PA0017 KEGG:ns NR:ns ## COG: PA0017 COG0144 # Protein_GI_number: 15595215 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Pseudomonas aeruginosa # 12 434 2 432 434 328 46.0 1e-89 MSQVTSNSSRFNLRAQVVQTLLKVQQGQSLASILNTQLNQVAERDRALFHELVLGTLRQW FALKSISLPLLSKPLNNETVETCLYVGLYQVLCTRIAAHAAISETVDATKQLGFPALSGI VNAILRRATRETEDFEQGLQQAHGLPSWLFKRLKKDWGEQTEALCQSLKQVAPLTLRVNQ RHIGRDAYLAKLQSLDIQARACLFSEAGIVLEQSVQITQLPGFEQGWFSVQDEHAQLCAT LLPDLNNKTVIDACAAPGGKTAHLLEKFKPAQLIAIDQDPSRLVRVTENLNRLALDQSHT EILAADATKWTPVQPVDCIVLDAPCSATGVIRRHPDIRLLRQSSDIAQTIELQKQILEHM WQQLKVGGTLLYITCSILKSENEQQMTNFFTEHADAKEVKIEADWGIEQVHGRQLLPEAQ SGDGFYYCKIQKIA >gi|333032591|gb|GL891835.1| GENE 85 88935 - 89078 255 47 aa, chain - ## HITS:1 COG:no KEGG:AOLE_00090 NR:ns ## KEGG: AOLE_00090 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 47 1 47 47 70 87.0 2e-11 MNTSAIVMLIISMVFVWGGLALSILHLTKHPEELDEVLEEVKDQHTL >gi|333032591|gb|GL891835.1| GENE 86 89091 - 90569 1726 492 aa, chain - ## HITS:1 COG:PM0718 KEGG:ns NR:ns ## COG: PM0718 COG0733 # Protein_GI_number: 15602583 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Pasteurella multocida # 2 489 5 489 502 452 51.0 1e-127 MTDTRENWTSRSGFIIAAVGSAVGLGNIWRFPYVAYENGGGAFLIPYLLALITAGLPLLF LDYAVGHRSTGSPPKAYRALFKGGETLGWWQVCVCIIIGLYYASVLTWAGSYVYFSIGQM WGSDPEGFFFNTYLQTTKATGFDLQFVGHLFWPIVGIWALTLIILYGGVKKGVELSNKIF MPLLFILFTILVIQSLRLPGAVQGLNAFFTPNWSAMMDYKVWLAAYGHTFFSLSVGFGIM VTYASYLKPKTNLTGSGLIVGFANASTEILAGIGIFAALGFMAHAAGTEVKDVVSGGIGL AFIAFPKIISSLGSGADLFGLLFFSSLFVAGISSMVSILEVPIAAMQDKLKWGRKKAVTI IGGGSALVSIILFSSVNAIKLVDIVDHFINNIGIIGGALLSIISVAWFKRSALKELRDHV NRISTIQLGKGWDFTLTVITSLILLTTLCMTVFNLIKNGYDTYSMSLQGVFGWGSVIFCA VVAIVLSKMKDR >gi|333032591|gb|GL891835.1| GENE 87 90580 - 90723 66 47 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000021 NR:ns ## KEGG: ABBFA_000021 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 47 1 47 47 62 100.0 7e-09 MLKDYLFLLLLLIVIPHAKKEPKNTFVFVENKMHLLSIFIPLTNKQK >gi|333032591|gb|GL891835.1| GENE 88 91198 - 91890 897 230 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3654 NR:ns ## KEGG: ABSDF3654 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 230 12 241 241 416 99.0 1e-115 MKILKLSFLALGMGLSGFAQADFIGVKGDVGYWFYDGKANMSSQSPEDQDLDRKGSAQLS LAFEHPIPFIPNAKIRYVNLDTQTKSETLGQANYNVDLDHSDFILYYELLDNIVSVDAGL GATVLNGDITAYTGKRVDIDKTYPIAYLSGEVKLPFTGLSAKGEATYTNFDDAKITDALV EAKYKFADNLLIDLGLTAGYRILNIDLDDYDNNDLKFEFKGPYVGLEAHF >gi|333032591|gb|GL891835.1| GENE 89 91948 - 92547 534 199 aa, chain - ## HITS:1 COG:PA1655 KEGG:ns NR:ns ## COG: PA1655 COG0625 # Protein_GI_number: 15596852 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pseudomonas aeruginosa # 3 199 4 200 200 247 57.0 1e-65 MIIYGDVDSGNCYKIKLLLSLLNINHRWIHVDILNKDTQTAEFLSLNPNGKIPVLVLDDG RVLSESNAILGYLAEGTELIPADPYMKAKMYQWMFFEQYSHEPFIAVARFINKYLGLPPE RIEEYHKLQPKGHKALSIMNKALVEHDYLVGNKFTIADIALYAYTHVAEEGGFDLKLYPN IQEWCQRIQKCPKYVSMVE Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:38:41 2011 Seq name: gi|333032590|gb|GL891836.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld32, whole genome shotgun sequence Length of sequence - 20856 bp Number of predicted genes - 22, with homology - 22 Number of transcription units - 10, operones - 5 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 185 - 244 7.7 1 1 Tu 1 . + CDS 416 - 2020 2062 ## COG2224 Isocitrate lyase + Term 2033 - 2077 12.1 - Term 2027 - 2057 3.0 2 2 Tu 1 . - CDS 2083 - 2562 675 ## COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance - Prom 2583 - 2642 9.2 - Term 2710 - 2761 14.1 3 3 Tu 1 . - CDS 2766 - 3089 277 ## ABAYE2781 hypothetical protein - Prom 3150 - 3209 7.8 + Prom 3122 - 3181 5.8 4 4 Op 1 8/0.000 + CDS 3422 - 4159 662 ## COG0829 Urease accessory protein UreH 5 4 Op 2 13/0.000 + CDS 4261 - 4563 396 ## COG0831 Urea amidohydrolase (urease) gamma subunit 6 4 Op 3 17/0.000 + CDS 4575 - 4883 338 ## COG0832 Urea amidohydrolase (urease) beta subunit 7 4 Op 4 10/0.000 + CDS 4920 - 6620 1621 ## COG0804 Urea amidohydrolase (urease) alpha subunit 8 4 Op 5 16/0.000 + CDS 6691 - 7173 583 ## COG2371 Urease accessory protein UreE 9 4 Op 6 17/0.000 + CDS 7160 - 7825 425 ## COG0830 Urease accessory protein UreF 10 4 Op 7 1/0.000 + CDS 7849 - 8463 915 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 11 4 Op 8 . + CDS 8473 - 9042 625 ## COG2370 Hydrogenase/urease accessory protein + Term 9057 - 9106 3.3 - Term 9053 - 9081 -0.1 12 5 Op 1 . - CDS 9085 - 9636 164 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 13 5 Op 2 . - CDS 9636 - 11654 2071 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 - Prom 11779 - 11838 6.1 + Prom 11779 - 11838 6.8 14 6 Op 1 . + CDS 11891 - 12409 571 ## ABAYE2769 hypothetical protein 15 6 Op 2 . + CDS 12471 - 13784 1307 ## ABAYE2768 hypothetical protein 16 6 Op 3 . + CDS 13871 - 14524 993 ## COG0563 Adenylate kinase and related kinases + Term 14546 - 14579 4.1 17 7 Op 1 1/0.000 - CDS 14763 - 15455 663 ## COG0177 Predicted EndoIII-related endonuclease 18 7 Op 2 . - CDS 15456 - 16247 745 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB - Prom 16445 - 16504 6.8 + Prom 16419 - 16478 8.8 19 8 Tu 1 . + CDS 16534 - 17922 1478 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 17941 - 17972 3.4 - Term 17919 - 17967 10.1 20 9 Op 1 . - CDS 17977 - 19086 1029 ## COG3187 Heat shock protein - Prom 19114 - 19173 8.9 21 9 Op 2 . - CDS 19256 - 20032 760 ## COG3384 Uncharacterized conserved protein - Prom 20062 - 20121 6.0 - Term 20055 - 20118 6.5 22 10 Tu 1 . - CDS 20145 - 20624 508 ## COG1576 Uncharacterized conserved protein - Prom 20647 - 20706 4.2 Predicted protein(s) >gi|333032590|gb|GL891836.1| GENE 1 416 - 2020 2062 534 aa, chain + ## HITS:1 COG:PA2634 KEGG:ns NR:ns ## COG: PA2634 COG2224 # Protein_GI_number: 15597830 # Func_class: C Energy production and conversion # Function: Isocitrate lyase # Organism: Pseudomonas aeruginosa # 1 531 1 530 531 798 75.0 0 MTTYQTAIDAVRELKAKFGNTWADISPEDAARMQLQNRFKTGLDIAKYTAAIMRRDMAEY DADSSKYTQSLGCWHGFIAQQKMIANKKYFGTTSKRYIYLSGWMVAALRSEFGPLPDQSM HEKTSVPALIEEIYTFLRQADAKELNDLFRALNKAKEAGDSAKVAEITAQIDNFETHVVP IIADIDAGFGNEEATYLLAKKMIEAGACALQIENQVSDAKQCGHQAGKVTVPHEDFIAKI HALRYAFLEMGVEDGVIVARTDSEGADLTQKIPVVKEPGDIASKYISYLDTQEIDISEAQ EDEILIKRDGKLHRPTRLASGLYQFREGTQIDRVVLDCITSLQNGADLLWIETPTPNVQE IAHMVNRVKEVVPNAKLVYNNSPSFNWTLNFRQQAYDRWVAEGKDVSAYDRAKLMSAEYD NTELAAEADEKIRTFQADAAREAGVFHHLITLPTYHTAALSTHELAQGYFGDQGMLAYVA GVQRKEIRGGIACVKHQAMAGSDIGDDHKEIFAGENALKAGDDAKNTMNQFSAH >gi|333032590|gb|GL891836.1| GENE 2 2083 - 2562 675 159 aa, chain - ## HITS:1 COG:VC1962 KEGG:ns NR:ns ## COG: VC1962 COG3015 # Protein_GI_number: 15641964 # Func_class: M Cell wall/membrane/envelope biogenesis; P Inorganic ion transport and metabolism # Function: Uncharacterized lipoprotein NlpE involved in copper resistance # Organism: Vibrio cholerae # 1 158 2 163 163 125 42.0 3e-29 MKKSLLAIALMSTLLVACNKHENKTETTSDASTPVQTAQSNNNEAVDTAHTAENSLDWDG KYKGTLPCADCEGIKTELELKDDKTYELTETYLGKGDANPFETHGKFTFDKDNTSVITLD DKAQNRKFFIGENTATALDMEGKKVEGSLAEHYVLKKED >gi|333032590|gb|GL891836.1| GENE 3 2766 - 3089 277 107 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2781 NR:ns ## KEGG: ABAYE2781 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 107 1 107 107 189 100.0 2e-47 MKIFFVLVPFVFLTGCIFGQSSEVKRAEKLLNNFQCKNIETSEISTSSINSYYQQSLAVS KEKATSYVESYKNGEELFAMPLDEVVEQQYQLYKAACDSLGGVSAQP >gi|333032590|gb|GL891836.1| GENE 4 3422 - 4159 662 245 aa, chain + ## HITS:1 COG:alr3666 KEGG:ns NR:ns ## COG: alr3666 COG0829 # Protein_GI_number: 17231158 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Nostoc sp. PCC 7120 # 2 245 43 279 279 138 31.0 1e-32 MLWPEKTGVCHAIIVHPPAGIAGGDHLTFQIETERQAHAVITTPGAGKWYRTNGKHAFQH IYLNVKDDSILEWMPQETMLFDGALAHSETDIHLEQTASFIGWDMLVLGRQARAENFVQG SYHNQFKLWRKNKLLVADTLYFEGGDRWLSSCLGMNNQAVMASFWAVPPEKFRSSFYLEQ HIELIRELIMRMDVPVTLTLLEDVLCARFLGNDVRRCHDAFAAIRAKLRRYWFDLDEEFP RIWKT >gi|333032590|gb|GL891836.1| GENE 5 4261 - 4563 396 100 aa, chain + ## HITS:1 COG:PA4865 KEGG:ns NR:ns ## COG: PA4865 COG0831 # Protein_GI_number: 15600058 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Pseudomonas aeruginosa # 1 99 1 99 100 157 82.0 5e-39 MELNPTEKDKLLIFTAGLVAERRKARGLKLNYPEAVAFISAALLEGARDGMTVSELMHFG TTLLKREDVMDGVPEMIAEVQVEATFPDGSKLVTVHQPIV >gi|333032590|gb|GL891836.1| GENE 6 4575 - 4883 338 102 aa, chain + ## HITS:1 COG:RSc2033 KEGG:ns NR:ns ## COG: RSc2033 COG0832 # Protein_GI_number: 17546752 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Ralstonia solanacearum # 1 101 1 101 101 154 74.0 3e-38 MIPGEVITPETDIELNVGRETLKVVVANLGDRPIQVGSHFHFYEANDALQFDREAVKGFR LNIAAGTAIRFEPGQSREVELVALAGKREVYGFAGRVMGKLD >gi|333032590|gb|GL891836.1| GENE 7 4920 - 6620 1621 566 aa, chain + ## HITS:1 COG:PA4868 KEGG:ns NR:ns ## COG: PA4868 COG0804 # Protein_GI_number: 15600061 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Pseudomonas aeruginosa # 1 566 1 566 566 863 75.0 0 MKMSRRAYAEMFGPTVGDRIRLADTALFIEVEQDLTTYGEEVKFGGGKVIRDGMGQSQLL ADEVADTVITNALIVDWWGIVKADVGLKNGRIWKIGKAGNPDIQPDITIPLGAATEVIAG EGQILTAGGIDTHIHWICPQQVETALMSGTTTMVGGGTGPAAGTSATTVTPGPWHIATML QAIDDLPMNIGLLGKGNLSLPDPISEQIKAGVIGLKLHEDWGSTPAAIDNCLSVADEYDV QVAIHTDTLNEGGFLEETLAAFKDRTIHTYHTEGAGGGHAPDILKAIGQSNVLPSSTNPT RPYTINTIDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILQDLGAIAMMSSDS QAMGRVGEVILRTWQTAHKMKVQRGPLEGDNEFHDNNRVKRYIAKYTINPAITHGLSHEI GSVEVGKLADLVLWKPAFFGVKPSMIIKGGMIAAAPMGDINASIPTPQPVHYRPMFGAYP RGVHNTCITFLSQVAIDKKVAEKLNLKKLISPCKNTRSITKADMKHNTYCPVMQVHPETY EVRADGELLTCEPADVLPMAQRYFLF >gi|333032590|gb|GL891836.1| GENE 8 6691 - 7173 583 160 aa, chain + ## HITS:1 COG:RSc2031 KEGG:ns NR:ns ## COG: RSc2031 COG2371 # Protein_GI_number: 17546750 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Ralstonia solanacearum # 22 146 27 154 211 105 42.0 3e-23 MKIYTQRLEDISPDQAFETVELTFDTRQKSRFRAALASGVDIGADLPRTGILRSGSYIAT QEGDVLRVDAKPERLMKVTAQTEFDLLKAAYHLGNRHVPLMLTPTALYFEPDHVLAEMVE GLGLTVTETDHPFEPESGAYAQHSHDHRLSPIKVLHHVHS >gi|333032590|gb|GL891836.1| GENE 9 7160 - 7825 425 221 aa, chain + ## HITS:1 COG:RSc2030 KEGG:ns NR:ns ## COG: RSc2030 COG0830 # Protein_GI_number: 17546749 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Ralstonia solanacearum # 5 221 3 229 229 125 40.0 5e-29 MSTHNAAQLLQLLTLSSTALPVGAYCYSQGVETAIDIGLIHDESSAIAYFEEVLEMLLVR FELPVLKRLMQHYDDPDQFLIWAHLYKASRESKELLAESQQLAFSLNAWIKDVLKKTVEV KKQFGFVPVYAQLCGRLELKEVDVLTAYTFTVLENQVLAAVKTVPLGQMAGQRILWHLHG RVPQAVEKALKLKDEQLSSALPRYAMLSMKHETQYSRLFRS >gi|333032590|gb|GL891836.1| GENE 10 7849 - 8463 915 204 aa, chain + ## HITS:1 COG:PA4893 KEGG:ns NR:ns ## COG: PA4893 COG0378 # Protein_GI_number: 15600086 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Pseudomonas aeruginosa # 6 204 5 203 204 320 78.0 1e-87 MTERSPLRVGIGGPVGSGKTALTLNLCRALRDKYNMAVVTNDIYTKEDSNFLTRNEAMSP DRIVGVETGGCPHTAIREDASINLAAIDDLCEKFDGLELIIIESGGDNLAATFSPELSDL TLYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPMVGANLDVMDQDAKRMRGEKPFLF SNMKTQDGLEEIIQFIEKQGLFKA >gi|333032590|gb|GL891836.1| GENE 11 8473 - 9042 625 189 aa, chain + ## HITS:1 COG:aq_666 KEGG:ns NR:ns ## COG: aq_666 COG2370 # Protein_GI_number: 15606080 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Hydrogenase/urease accessory protein # Organism: Aquifex aeolicus # 15 162 10 158 180 58 33.0 6e-09 MNFIKKWSVGLLSMLPALAMAHPGQDHVHSGFMAGFIHPFTGLDHLIMALGFGVLLWSAA KQWKIAGVITLSITLVIGFLVGAQGLVPANVAEYGIVASLIITAIALWTKSNRILPIAAA LLASFHGMAHGVELAHAGHIVALVTGMVAGMALIYCGGLALGAVFTRYVPYGKKIVGACA ALVAVIGLS >gi|333032590|gb|GL891836.1| GENE 12 9085 - 9636 164 183 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 5 154 13 168 199 67 31 6e-11 MKNQLRIIGGEWKRRVLPFASIEGLRPTPDRVRETLFNWLMWDIQKAHVLDICTGSGALG FEALSRGAASVYMIEPDKTQARFLKDNIQLLKAQNCHLINATAQQALPRLKEQFDVVFLD PPYSLNLWQELAHLADIHIKNNGYIYVEADRDLSQLHLPATWQQVKTTKAGTVHAGLYQK VSE >gi|333032590|gb|GL891836.1| GENE 13 9636 - 11654 2071 672 aa, chain - ## HITS:1 COG:PA4003 KEGG:ns NR:ns ## COG: PA4003 COG0768 # Protein_GI_number: 15599198 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Pseudomonas aeruginosa # 1 606 1 608 646 539 46.0 1e-153 MKQHFPLKDIQQEKRIYRGRIFFAVGLVIICLLVLASRYAYLQIFHYDEFSTASDKNRIR LQPLPPARGYIYDRNGVLLADNYPVFTATLSKADVENVDTVIEQLQPILELTQEDVDRFK SRIKTARKTERVAIKLNLTETNIAKFSEVKYKFPGVRIETQMTRYYPHGDLFAHVIGYVG RINDKELKSIDKDLYAGTNLIGKIGVEKSYEDLLHGTPGYESVEADAHSNILRHLGRKDP TRGNDLYLSLDYGLQVVASQQLAGRRGAIVAIDPRTGEILALVSSPSFNPNLFVTGINHK DYSSLRDNIDQPLYNRAVQGVYPPGSTIKPMEAMGGLHYGIVDWATAISDPGYFHLPGDS HKFRDWKKTGHGIVNMHKAIIMSCDTYFYILANQMGIDQMNQWMRQFGFGQKTGVDLPSE SEGLYPNPEWKMRTRKSKWMKGETISVSIGQGAFTATPLQLAMATAITANHGSHVVPHVL RATHGAKPFTVRNAPDGKINFNGTDEDWVKMREAMIDVIQSGTGRGIRTPLYQIAGKTGT AQVKSIAQGKRYNEAALSERQLDHGLFVGFAPADKPEIAIAVIWENGRHGGSAAQLAKPV FDYWLLTRKKNPIRPANHQVNGGLMTAGIKPGELPSGNESASSTPATSAPTSAAASTPQA TPTRPATNEVDE >gi|333032590|gb|GL891836.1| GENE 14 11891 - 12409 571 172 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2769 NR:ns ## KEGG: ABAYE2769 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 172 5 176 176 328 100.0 5e-89 MRKIYPLLAVLTVSSWAHAQDYSFLPEAKLADHKASTWNVGAGFTQKLLHLNGEWVNPYG IAYAKVGAFLNGDKTAGGQVGFRYPYYLTGTDKNGYYIGFYAGHLDSKSVDGDYKSRLGA GVDLAYVLLNSERISTFSVGIGAAEKLTDQNGDVAADTKPQIQFSYSLSFGL >gi|333032590|gb|GL891836.1| GENE 15 12471 - 13784 1307 437 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2768 NR:ns ## KEGG: ABAYE2768 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 437 1 437 437 850 100.0 0 MLEYVSGLWQTFLHRPDFWAVLSIIPVTAFVTWAHVWMALKMVFYPIKFWGFHLGPLPVG WQGIVPRKAGRISGIITDNTLSKLGSLREFLEAMDPEDMARIIGEQVGFELEHLIDEVMI DRNAVLWENLPYSIKRRIYAQAHKQLPGVLRELVTELTMNVESLVDMREMVVSQMEGDRR LMVRMFLKVGQKEINFIWHISALIGMFFGVFQMVVWFVVPWHWTVPFWASIWGFLTNWIA IWMVFNPIEPHYIRYPQIFRLTKDRKFPWIVPVLRIGTYNVQGAFMKRQEEVSEVFSSVV TEDLITLKSIMTEMMYGSRKDKTRRIVKRHINEIMETPLVRTSLQLSLGPREYARLKTDL IDRSIEITMGPVCDPALNASRAQKIFQMFKERIRELTPKEFQNLLRPAFQEDEWILIVLG GVTGFIAGTIHLFVAFL >gi|333032590|gb|GL891836.1| GENE 16 13871 - 14524 993 217 aa, chain + ## HITS:1 COG:RSc2533 KEGG:ns NR:ns ## COG: RSc2533 COG0563 # Protein_GI_number: 17547252 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Ralstonia solanacearum # 1 216 1 221 222 271 60.0 5e-73 MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVS DELIIGLVKERIAQPDCVNGCIFDGFPRTIPQAEALEKEGISIDHVIEIDVPDEEIVKRL SGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVG FYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK >gi|333032590|gb|GL891836.1| GENE 17 14763 - 15455 663 230 aa, chain - ## HITS:1 COG:VC1011 KEGG:ns NR:ns ## COG: VC1011 COG0177 # Protein_GI_number: 15641026 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Vibrio cholerae # 9 213 5 208 213 312 71.0 4e-85 MAVKNMTKKQIQIFFERLREQRPSPQTELKYSSPFELLIAVMLSAQATDVSVNKATDKLY PVANTAEKIYNLGVDGLKEYIKTIGLYNAKAENVIKTCKILMEQFNGEVPSNRKDLEALP GVGRKTANVVLNTAFGQPTMAVDTHIFRVGNRTGLAIGKNVLEVEHRLVKVIPKEFILDA HHWLILHGRYCCIARRPKCSECVVADVCNWPDRFEFGAQKQIAVKNIEAE >gi|333032590|gb|GL891836.1| GENE 18 15456 - 16247 745 263 aa, chain - ## HITS:1 COG:PM0386 KEGG:ns NR:ns ## COG: PM0386 COG2878 # Protein_GI_number: 15602251 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Pasteurella multocida # 7 141 38 164 198 157 56.0 2e-38 MNPSISLIREIDALLPQTQCGLCGHRDGCLPYAKSIAEGEEANKCVPGGQPVADALAQLL NRSLLPAETSVWPVQADGRPQRMKAIIREDECIGCTKCINACPVDAIIGSGKLMHTILTD LCTGCELCIPPCPVDCIDLVEDTQALPSEQQRIAEQNDLRQRYYAHIQREEKRRIHRKGP VVRAEIDTQLFAQFSQALDDLPSIQLIEKPKEAIVSDAKTTIELAKIRTQIKKLEKQLSV REDAKKRLQLDELQQQLIQLQEV >gi|333032590|gb|GL891836.1| GENE 19 16534 - 17922 1478 462 aa, chain + ## HITS:1 COG:PM0043 KEGG:ns NR:ns ## COG: PM0043 COG0334 # Protein_GI_number: 15601908 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Pasteurella multocida # 21 462 7 449 449 676 74.0 0 MYCTNLIHYYAEDRALKYNNLNEFLNYVQARDPHQPEFLQAVEEVMTSLWPFIEKNPEYA EQGLLERLVEPERVIQFRVSWMDDQGQTQVNRAFRVQYNSAIGPFKGGMRFHPSVNLSIL KFLGFEQTFKNSLTTLPMGGGKGGSDFNPKGKSDAEIMRFCQALMIELYRHLGPNTDIPA GDIGVGAREVGYMAGMMKKLSNDTACVFTGKGISFGGSLMRPEATGYGTVYFAEEMLKTR GQSFAGKTVSISGSGNVAQYAAEKAMFLGAKVVTLSDSNGTVYLKNGFTDELLAEVMELK NIQRGRISEFASKHGFEYFEGKTPWHIPVDIALPCATQNELTGEDAKTLIANGVICVAEG ANMPSTLEAVEHFIEAKILYAPGKASNAGGVATSGLEMSQNAIRLGWTHAEVDERLHAIM KDIHANCVRYGTKEDGTVNYVDGANIAGFVKVADAMLAQGIY >gi|333032590|gb|GL891836.1| GENE 20 17977 - 19086 1029 369 aa, chain - ## HITS:1 COG:slr0841 KEGG:ns NR:ns ## COG: slr0841 COG3187 # Protein_GI_number: 16331728 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Heat shock protein # Organism: Synechocystis # 22 220 32 245 291 65 28.0 2e-10 MKIKYLILALLPFSLMACQTVSNTQAPIVSEQQQNLATTLSEYTWTYQNVKASKPLILNF NADGKLAINTGCNGQGGTWKVEGNQLITSPLASTMMACQDDLMKQEQLSNSIFSEAKLPI EISNNNGLVILSVTDKAGQKHIFQGEKATNTQALTDYSWSYQPENTKKPIVLNFTNDRLS IDTGCNRQGTTWKVENNTIVTTDVMSTMMACEPALMKQEQFSSSLFQKRAIPFELNTTNV DQPTLTVTDAQGQKYTFTGKMTPEAKYQSEGKTVFLEVAPETKSCTGVAPQTCLQVREVK YDDKGVKTYADKNWSLYYGQIEGFEHNPNQRVILRVKRFEVKNPAADQSSQADVLDMVVE QELVKKPKK >gi|333032590|gb|GL891836.1| GENE 21 19256 - 20032 760 258 aa, chain - ## HITS:1 COG:PA2839 KEGG:ns NR:ns ## COG: PA2839 COG3384 # Protein_GI_number: 15598035 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 6 258 2 256 256 248 52.0 9e-66 MELQTLPGLFISHGSPMLALDPEQVGPALHRLSVNLPTPKAIIVMSAHWESKALEVSSST RPETWHDFRGFPPELYEIRYSAPGQPELAEEILKLLADAHFVAHANSTRPRDHGVWMPLL HMYPEADIPVVEISLPMGLTAQEIYRIGQTLAPLREKQILLIGSGSITHNLAELSWQGDN SKVPEWASTFRNTVVSKLSHQDYDGVLEWQTLPFVKRNHPSLEHFAPLFFAMGTGHRFTI VHSSFTMGSLGMDIYRFD >gi|333032590|gb|GL891836.1| GENE 22 20145 - 20624 508 159 aa, chain - ## HITS:1 COG:ECs0674 KEGG:ns NR:ns ## COG: ECs0674 COG1576 # Protein_GI_number: 15829928 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 158 1 154 155 149 48.0 3e-36 MKIRILTIGQKMPAWVLTGFEDYFKRIQPFVQTQVIELPMAKRGKNDSEADILKYCQIEG ESILNALKPNETLIALEVGGRELSTEKLADTMKQWMLEGNDVALAIGGPDGLSDQVRKAA AWHWSLSKLTMPHPLVRILLIEQLYRAMSINHNHPYHRA Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:39:05 2011 Seq name: gi|333032589|gb|GL891837.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld33, whole genome shotgun sequence Length of sequence - 36797 bp Number of predicted genes - 32, with homology - 32 Number of transcription units - 16, operones - 9 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 11/0.000 - CDS 379 - 1095 248 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 2 1 Op 2 . - CDS 1061 - 1450 348 ## COG2919 Septum formation initiator - Prom 1666 - 1725 9.1 + Prom 1996 - 2055 12.8 3 2 Tu 1 . + CDS 2078 - 2755 488 ## COG2323 Predicted membrane protein + Term 2757 - 2814 13.1 - Term 2745 - 2801 12.9 4 3 Op 1 3/0.000 - CDS 2852 - 4141 1491 ## COG0148 Enolase 5 3 Op 2 3/0.000 - CDS 4187 - 5044 937 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 6 3 Op 3 . - CDS 5076 - 6713 1923 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 6754 - 6813 6.0 + Prom 6852 - 6911 7.3 7 4 Tu 1 . + CDS 6937 - 7425 658 ## ABBFA_001554 hypothetical protein + Term 7441 - 7480 6.2 + Prom 7436 - 7495 11.6 8 5 Tu 1 . + CDS 7661 - 8506 690 ## COG3687 Predicted metal-dependent hydrolase + Term 8518 - 8553 4.0 - Term 8504 - 8540 5.1 9 6 Op 1 . - CDS 8559 - 9653 927 ## COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold 10 6 Op 2 . - CDS 9673 - 10389 649 ## COG2755 Lysophospholipase L1 and related esterases 11 6 Op 3 . - CDS 10432 - 10839 465 ## ACICU_02014 hypothetical protein 12 6 Op 4 . - CDS 10910 - 12934 2214 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Prom 12991 - 13050 4.2 + Prom 12942 - 13001 6.1 13 7 Op 1 . + CDS 13070 - 13630 385 ## COG1695 Predicted transcriptional regulators 14 7 Op 2 . + CDS 13633 - 14550 802 ## ACICU_02017 putative peroxidase + Term 14558 - 14589 1.0 - Term 14545 - 14577 2.0 15 8 Tu 1 . - CDS 14598 - 15653 1090 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Prom 15779 - 15838 7.0 - Term 15942 - 15995 3.4 16 9 Op 1 . - CDS 16081 - 16404 354 ## COG1742 Uncharacterized conserved protein 17 9 Op 2 19/0.000 - CDS 16447 - 18723 1160 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 18 9 Op 3 . - CDS 18733 - 19146 314 ## COG2127 Uncharacterized conserved protein 19 9 Op 4 . - CDS 19156 - 19947 808 ## ACICU_02022 hypothetical protein 20 9 Op 5 . - CDS 19990 - 21039 1244 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 21069 - 21128 7.7 + Prom 21073 - 21132 9.6 21 10 Tu 1 . + CDS 21228 - 22748 1181 ## ACICU_02024 hypothetical protein - Term 22535 - 22576 1.0 22 11 Op 1 . - CDS 22745 - 23425 416 ## COG1451 Predicted metal-dependent hydrolase 23 11 Op 2 . - CDS 23425 - 24096 1003 ## COG0120 Ribose 5-phosphate isomerase - Prom 24221 - 24280 5.2 24 12 Tu 1 . + CDS 24204 - 25745 1964 ## COG1171 Threonine dehydratase + Term 25756 - 25805 14.9 + Prom 25765 - 25824 9.4 25 13 Op 1 17/0.000 + CDS 25890 - 26540 550 ## COG0569 K+ transport systems, NAD-binding component 26 13 Op 2 . + CDS 26559 - 27896 1212 ## COG0168 Trk-type K+ transport systems, membrane components + Term 27904 - 27934 1.0 - Term 27890 - 27920 1.0 27 14 Op 1 . - CDS 27937 - 29088 1228 ## COG2829 Outer membrane phospholipase A 28 14 Op 2 . - CDS 29109 - 32048 3056 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like - Prom 32223 - 32282 5.0 - Term 32244 - 32287 4.6 29 15 Tu 1 . - CDS 32300 - 34396 2190 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 34474 - 34533 6.1 + Prom 34435 - 34494 7.6 30 16 Op 1 1/0.286 + CDS 34634 - 35638 1163 ## COG0524 Sugar kinases, ribokinase family 31 16 Op 2 . + CDS 35655 - 35963 385 ## COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 32 16 Op 3 . + CDS 35989 - 36597 305 ## ABBFA_001528 hypothetical protein Predicted protein(s) >gi|333032589|gb|GL891837.1| GENE 1 379 - 1095 248 238 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 15 238 6 227 234 100 33 2e-20 MRHLHHQTSQTKLWAVIPAAGSGSRFSKTELKQYQYIQDATVIEHTVKRLSQLPLTGYVL AIGKQDTFASTLSFQDKHKAHFCNGGVERVHSVLNALNYLSQIADEDDWVLVHDAARPCV TFECLNTLVKNAIETNQSAILAIPVRDTLKQVNQEQQIDKTVSRELLWQAQTPQIAKIGI LKKAIETALKNNLTITDEASALESIGESVLVVMGRSDNIKITYPDDLELARLILQSQN >gi|333032589|gb|GL891837.1| GENE 2 1061 - 1450 348 129 aa, chain - ## HITS:1 COG:PA3634 KEGG:ns NR:ns ## COG: PA3634 COG2919 # Protein_GI_number: 15598830 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation initiator # Organism: Pseudomonas aeruginosa # 6 97 2 93 94 75 44.0 2e-14 MLEVFRSTSSKLILLLVIVLVAILQYQFWLGEGGYFPHQALMQQIQQQAEVNDELKERNR ILAAEVFDLKNGTEAIEEHARLDLGLVKPHETFVQMSTISTHYKPIYIDPNAKVDLETNE TPPSPDIPD >gi|333032589|gb|GL891837.1| GENE 3 2078 - 2755 488 225 aa, chain + ## HITS:1 COG:STM0976 KEGG:ns NR:ns ## COG: STM0976 COG2323 # Protein_GI_number: 16764336 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 2 224 5 229 230 176 38.0 2e-44 MDLSNILIGDTTWSFVLEILVRCTIMFIIIISFLRLSGKRGIRQLSLFELAIILCLGSAA GDPMFTKDLPIAHALIAFIAILSLYRLVTWGMVKHKKIEDLLEGKALCVVKEGLLVYKDF QKQTYSHDEFFSEMRQQNVEHLGQVRTALLESDGILSLLYYEDEDVKWGLPLFPDAYRKA EVLKINTFYSCMKCGETKILNKLDQECSRCHHHSWAESLKTRRLG >gi|333032589|gb|GL891837.1| GENE 4 2852 - 4141 1491 429 aa, chain - ## HITS:1 COG:PA3635 KEGG:ns NR:ns ## COG: PA3635 COG0148 # Protein_GI_number: 15598831 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Pseudomonas aeruginosa # 1 427 1 429 429 588 72.0 1e-167 MSQIVDIRAREILDSRGNPTIEADVILESGVVGRACAPSGASTGSREALELRDGDKSRYL GKGVRTAVQNVNSSIHELLVGQSVFEQKALDEKMIAFDGTENKSKLGANATLAVSLAAAH AAAAEQKLPLFQYIANLRGQTTLTMPVPMMNILNGGAHADNTVDIQEFMIEPVGFTSFAE ALRAGAEVFHSLKSVLKKQGLNTAVGDEGGFAPNLRSNEEAITVILQAIEQTGYKAGSDI MLALDCASSEFYKNGQYILEGEGNKSFTSNQFADYLAGLVKQYPIISIEDGLDESDWEGW SYLTSILGDKIQLVGDDLFVTNPKILQRGIDEKVGNSILIKYNQIGTLTETLDAIYLAKA NGYTTVISHRSGETEDSTIADLAVGTAAGQIKTGSLCRSDRVSKYNQLLRIEELTKAVYR GKAEFKGLN >gi|333032589|gb|GL891837.1| GENE 5 4187 - 5044 937 285 aa, chain - ## HITS:1 COG:PA3636 KEGG:ns NR:ns ## COG: PA3636 COG2877 # Protein_GI_number: 15598832 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Pseudomonas aeruginosa # 7 284 3 280 281 437 73.0 1e-123 MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKA SFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPA FLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEAGNDKLILCERGSAFGYNN LVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFL ESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH >gi|333032589|gb|GL891837.1| GENE 6 5076 - 6713 1923 545 aa, chain - ## HITS:1 COG:PA3637 KEGG:ns NR:ns ## COG: PA3637 COG0504 # Protein_GI_number: 15598833 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Pseudomonas aeruginosa # 1 537 1 535 542 746 65.0 0 MTHFIFVTGGVVSSLGKGISAASVAALLEARGLKVTMVKMDPYINVDPGTMSPFQHGEVF VTEDGAETDLDLGYYERFLRRAKMTKLNNFTSGRVYQDVLNKERRGDYLGGTVQVIPHIT DNIKERVLRAGEGYDVAIVEIGGTVGDIESLPFMESVRQLMVELGHKRTMLMHLTLLPYI KSAAELKTKPTQHSVKELLSIGIQPDILICRTEYDVDADTKRKIALFTNVEARAVVVCKD AKTIYQIPRGFYEQNVDDLICERFGFTDLPEADLTDWDNVVEALLNPEYTVRVAMVGKYV ELPDAYKSVNEALLHAGIKNRVKVQIDYVNAEELESQDVSILKTADAILVPGGFGERGTE GKMKAIQYARENSIPFLGICLGMQLAVIEYARHVAGMPEASSTEFNRSTKYPLIGLITEW LDERGELQQRSLESDLGGTMRLGAQKSELVEGTKTREVYGKAEITERHRHRYEMNNRFIE AIEQAGMKISGYSSAQHLVETVEIPEHPWFIAVQFHPEFTSSPRDGHPLFASFIDAAKTQ HQKSK >gi|333032589|gb|GL891837.1| GENE 7 6937 - 7425 658 162 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001554 NR:ns ## KEGG: ABBFA_001554 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 162 1 162 162 134 100.0 1e-30 MANKKLLICAAIAAGLLLTACVKKETPKEEEQDKVETAVSEPQPQKPAKFESLESVDTQE AQVQEQPQVEVHREETANTTTEIRRETRPARSDESSQTQVAEQPKSETPKVEPKPEKKPE PKAEPKPEKAQSKPAAKATEPANTEDDAVAAAIAAATPALKN >gi|333032589|gb|GL891837.1| GENE 8 7661 - 8506 690 281 aa, chain + ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 10 275 12 278 278 201 37.0 2e-51 MKTALNRTPASFPVRRMDYNFEDTPRYWCNHEPSLTHYFTGLSTLFPEGESYFVRSVRAL RAKAKENEILDREIGAFIGQEAMHSKEHHAFHVSAQQYGLNPESLEKATGIVLKAIEKVF SKKWNLLVTVGLEHYTAVLVVSMMQSVNELMTDNTIRNLWLWHSVEETEHKAVAFDLYQH LYGNGLDAYIPRVAVFTFSLVLITAFSTIYHIALMKRDKQLTNFKTWRNFFNFASKQYKV LIPKFLEYYRFDFHPNQTDEKALVAATKVKLGISDRSSLLS >gi|333032589|gb|GL891837.1| GENE 9 8559 - 9653 927 364 aa, chain - ## HITS:1 COG:YPL095c KEGG:ns NR:ns ## COG: YPL095c COG0429 # Protein_GI_number: 6325162 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta-hydrolase fold # Organism: Saccharomyces cerevisiae # 106 358 168 448 456 95 27.0 1e-19 MGISVFNKIKDFGSELFDLVLGAEHPKVYYHPQGKIKDILDKLPQLKQKYRPTPWLTNSH VHLLYFDLIRKQTIKLAYDRIDQLTMSDGGITAIAWYGYNLPPDTPTVVIMHTITGTPES MRELVRDLNQYTGWRIALCLRRGHAGLPMPVPQISLFGSTSDLKEQLNHIQSLFPASDLY AVGSSAGTGLLVRYLGEQGEDTPFKAAFAMCPGYNTEIGFKNVHPFYSKMMTKKLFKYFI YPYQNTWSQIASLEKVLSATNLEEFEKEYFEMAGFEDYETYCKSINPIYVFENIKIPLMI LNAEDDPVCSIKNLEPYKEPIQQMSNVAVVTTKKGSHCAFYEGWRSTSWAARLMADYFLI EHNK >gi|333032589|gb|GL891837.1| GENE 10 9673 - 10389 649 238 aa, chain - ## HITS:1 COG:mlr3756 KEGG:ns NR:ns ## COG: mlr3756 COG2755 # Protein_GI_number: 13473226 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Mesorhizobium loti # 7 235 8 237 237 77 27.0 3e-14 MWLKLSTFFLLPVLFIQGHKVRKNTPRLAEAKGEREGGAGQGKSLSLLILGDSAAAGVGV ENQKDALSGAIIQELQNEFSLQWKLHAKTGDTTRQVFNALQHLEEQKYDVIVTSIGVNDV TKLISAKSWIKQQKQLFEHIQKRFQPKLIIVSGVPPMQHFPALPNPLAWLFGQYAVQMNQ KLQQWLAPQSHFKFLEYDIETFQAMNLPMASDGFHPSKEVYAVWGRQVAAIVRQSFNS >gi|333032589|gb|GL891837.1| GENE 11 10432 - 10839 465 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02014 NR:ns ## KEGG: ACICU_02014 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 135 1 135 135 263 100.0 2e-69 MTLEITKQSLEKWHHMIQSNDLSNLNDLLADEVVFRSPVAYKPYEGRQVVFFILTNVIQV FQNFTYHREFYTENGENVVLEFSANVGDKSLKGIDMIRFNEQGKIIDFEVMIRPLSGLAA LAEQMGIRIAQFKPQ >gi|333032589|gb|GL891837.1| GENE 12 10910 - 12934 2214 674 aa, chain - ## HITS:1 COG:PA3092_1 KEGG:ns NR:ns ## COG: PA3092_1 COG1902 # Protein_GI_number: 15598288 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Pseudomonas aeruginosa # 4 355 7 358 358 540 72.0 1e-153 MSLYPHLLKPLDLGFTTLKNRVLMGSMHVGLEEAPGGYERMAAFYAERAKGDVGLIVTGG IAPNQAGLTFAHASKLDSTEEAEKHKVITEAVHAAGGKIALQILHTGRYSYQPEIVAPSA IQAPINPIKPKAMTSAEVQQTIDDFANCAKLAQYAGYDGVEIMGSEGYLINEFIAARTNH RDDEWGGSYENRIRFPVEIVKRTREIVGENFIIIYRLSMLDLVEGGSTLEEVIQLAKAIE KAGATIINTGIGWHEARIPTIATKVPRAAFTWVTEKLKGEVSVPLITSNRINTPEMAEHV LASGHADMVSMARPMLADPDFVLKASEGRSDEINTCIGCNQACLDHIFSMKIATCLVNPR ACYETELIFKEAQNQKNIAVIGAGPAGLSFAVYAADRGHQVKIFEASHQIGGQFNIAKTV PGKEEFYETLRYFNRQIELRPNIELVLNHPATYEELSQSDFDEIVVATGVTPRQLQFEGI DHPKVLSYLQVLKERAPVGQRVAIIGAGGIGFDTAEYLTHEGESGSLNPEKFYEEWGIDT HYEHVGGLKQPKVEASEREIYLLQRKVSSVGAGLGKTTGWIHRTGLKNRNVKMLAGVQYD KVDDQGLHITVDGKPTVLEVDNVVICAGQESFTAMYDQLKADGKNVHLIGGAKEAGELDA KRAIRQGAELAAVL >gi|333032589|gb|GL891837.1| GENE 13 13070 - 13630 385 186 aa, chain + ## HITS:1 COG:RSp0309 KEGG:ns NR:ns ## COG: RSp0309 COG1695 # Protein_GI_number: 17548530 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 1 176 1 172 178 145 46.0 3e-35 MSLPHVLLTSLLERPSTGFELARRFDRSMGFFWNATHQQIYRELNNMLKKGWVSTLENEM DSGRKKTYQVEQLGRIELASWMTQQSEPAQLRDDLMVRLRAEAQLGNNQILPELLRHLGL HQEKLKLYQTIYDKDFKDSDDLNNRVLYIHKMILELGITMETEWIKWLEQVIPQLKLFAQ DNVSGE >gi|333032589|gb|GL891837.1| GENE 14 13633 - 14550 802 305 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02017 NR:ns ## KEGG: ACICU_02017 # Name: not_defined # Def: putative peroxidase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 305 1 305 305 610 100.0 1e-173 MPYYTMPDQESLFVRRVGRGEPVLVLSGLGMQSWQWLPFIYANRKEYEFIIPDWRGFGGS KNCAIPEQDAISSHWQDVAHLIEQLKLDKFILMGYSMGATTAMHGMKHAHLAQQLKAYLH IDQTPKISVDATWQYGLFGPLHAQFKQLLNDIYQLLSIHKNAKYLYELSLPDRQKLVRLW VDFIELQSSNPFSPFVFKTALKQPFLQKYLLPIQRLDYLFWYVENYLFHNEDYREALQQL QCPTTFFIGRNSTLYPETGQTLIAHSVEHAKTIYFERSGHTPLLTEPKKFGHEITTFLSE LKHAS >gi|333032589|gb|GL891837.1| GENE 15 14598 - 15653 1090 351 aa, chain - ## HITS:1 COG:PA2943 KEGG:ns NR:ns ## COG: PA2943 COG0722 # Protein_GI_number: 15598139 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Pseudomonas aeruginosa # 21 342 35 360 364 359 52.0 5e-99 MNALNTLLTQSNTKETPVSLPVQLKAKYPLVQTFARQIAEHRQIIQNILAGKDQRLMVIT GPCSIHDPVAVLEYADRLQKLQEKVKDQIFIVMRAYIEKPRTTVGWKGFMYDPNLDGSSN LQLGLEKSRELYLQIIEKGLPIASEILSPMATGYFDDLLAWGAIGARTSESQIHREISSH MPYSIGFKNGTDGSIQIALDAIQSAQNEHQFLGMNQQGLPSVIQSAGNPLPHLILRGANH GPNYDLASIQAIREKHKQNLPALVIDCSHGNSGKDPLRQPEVLQQIVAERLKTQVKGVMI ESHLVDGNQKISCEMTYGQSVTDGCLGWNKTEQLLLNVAKQLKASELAHSA >gi|333032589|gb|GL891837.1| GENE 16 16081 - 16404 354 107 aa, chain - ## HITS:1 COG:RSp1275 KEGG:ns NR:ns ## COG: RSp1275 COG1742 # Protein_GI_number: 17549494 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 4 103 9 108 110 112 65.0 1e-25 MFGLFIITAIAEILGCYFPYLILKEGKSAWLWLPTALSLAVFVWLLTLHPAASGRIYAAY GGIYIFTALMWLRFVDQVALTRWDILGGVIVLCGAGLIILQPQGLIR >gi|333032589|gb|GL891837.1| GENE 17 16447 - 18723 1160 758 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 10 742 14 808 815 451 35 1e-126 MLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEE YVEQHTPKLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFA VYLLKRHQINRLTLTQYLSHGTRKDEVQVEEEVEDIEGESNSGNAGPLELYTLNLNVEAQ KGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLS HAEIYSLDIGALVAGTKYRGDFEKRLKQLLNALKKNPNAILFIDEIHMIIGAGSSMGSTM DASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSISETIDILRGL KTKFEDFHHVQYDDKALVSAVELSAKFINDRFLPDKAIDVIDEAGAQRRLKAESEDSLIT VENIEDIVSKIARIPPKTVSKDDKSVLENLERDLKRVVFGQDEAITALASAIKLSRAGLK SPDKPVGSFVFAGPTGVGKTEVTKQLAKLLGVELVRFDMSEYMERHAVSRLIGAPPGYVG YDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQIMDHGALTDNNGRKSDFRNVIIV LTTNIGAESISRASIGFTEQDHSSDNQEAMKRAFSPEFRNRLDGVIQFKALPTTVIESVV DKFLTELQAQLDEKRVVLDVDQSARDWLATNGYDRLMGARPMQRLIQEHLKKPLAEMILF GELADHGGNVAVSVKKEDGKAVGLKLEVFEDHHTAEPA >gi|333032589|gb|GL891837.1| GENE 18 18733 - 19146 314 137 aa, chain - ## HITS:1 COG:RSc2465 KEGG:ns NR:ns ## COG: RSc2465 COG2127 # Protein_GI_number: 17547184 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 39 134 11 106 108 115 56.0 3e-26 MRTNKRQTNLKDIKASFQQSGYVDWHFNPRLSDSQNEDHDGEVVVQTAPPELKRPPLYAV VLLNDDYTPMDFVIEILQQYFAMNLDQATQVMLTVHYEGKGTAGVYPRDIAETKANLVNN YARSQGHPLLCQIEPKA >gi|333032589|gb|GL891837.1| GENE 19 19156 - 19947 808 263 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02022 NR:ns ## KEGG: ACICU_02022 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 263 1 263 263 504 100.0 1e-141 MCVLTLILNTEMTMQNSEQTTSVESSLQKKKFLNTNKPLFIGAAILMSGCFALGYTIGHR QGLTVVGYDADAEQLVEVVQKQKTALDAVNKSLNAAVQERDVAVTNANDLFEALNQANAD KTQQEGMSNIYREILRQRGGLSLTIQNLAIKPLPENAYEYQLDLVQVSPSKRRASGLVEI RLIKDTEVLVVPLEDKNFNFTDFERLTGRWTMPKGFTPQFIEVRLTGGSDTPVIKRFSWQ RGKPVETPSAFVAEIPQAEANSQ >gi|333032589|gb|GL891837.1| GENE 20 19990 - 21039 1244 349 aa, chain - ## HITS:1 COG:PA0662 KEGG:ns NR:ns ## COG: PA0662 COG0002 # Protein_GI_number: 15595859 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Pseudomonas aeruginosa # 1 349 1 344 344 399 58.0 1e-111 MISVGIVGGTGYTGVELLRILLRHPKAQVRVLTSRTEAGKPVADMFPNLRGHTDLQFSDL NIDALKECDVVFFATPHGVAMQHAKDLIAAGTKVIDLAADFRLQNLEQFEKWYGMEHACP DVLKDSVYGLTELNREKIKQAQVIGNPGCYPTTVQLGLAPLLKSAQALIETKNIIIDAKS GVSGAGRKASLGMIYSENADNFKAYGVAGHRHHPEIVEALENIAGKKDVFEGLLFVPHLV PMIRGMLSTIYVDLTEAGKQTDLQALYENFYANEKFVDVMPANSSPETRSVRGANELRIA LYKPQPNKLIILAAQDNLVKGASGQAVQNMNLMFGFNEDEGLQGIGLLP >gi|333032589|gb|GL891837.1| GENE 21 21228 - 22748 1181 506 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02024 NR:ns ## KEGG: ACICU_02024 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 506 1 506 506 874 100.0 0 MLDQSKEIKVCTYLGLTTLILSVALVGCGGGSSSGGSSNTPKPSEPTPEVMTDITLKTPV EMRNVQLKVYDNTDNSILIDTQVASLTSYDIKLPSTKLNRLYRVEVTTQGSSQVFDPTKS EYQNISGVYHAFITPSSISNKTQLISPSSEAIYQRAVIRSGQLPNETIIPTRIEQLHVDL ASQDVYRSLLNAFKDTNIPSLSPASTLTILNLLKYSTTKPSTYVDSYLSFGYLQYWSSIH NTNSPYQDLTQSLATDLKDGYLDGKKLIGDKSSFTPIFTSAPDNIDPAKNTLLDIAANQK VTRDYFATNLRAATFKLADLQDQSHLDPIGYDLLDKKQYSGIIPAGNTSEFFRIDGAGDY RRAVGFSGITTTCNGSAYPCKQGLTSINISDPKLPATDYLVGHYEDSTTGCQLNFRANGQ IELIKGSQSYRSALSADSTDNLLQTDAASYSYLLNSSSSEPNNSTQQYNFIQLHIKANKI VSAQAGLDSRKAPDVLQTTQLECSFS >gi|333032589|gb|GL891837.1| GENE 22 22745 - 23425 416 226 aa, chain - ## HITS:1 COG:HP0806 KEGG:ns NR:ns ## COG: HP0806 COG1451 # Protein_GI_number: 15645425 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Helicobacter pylori 26695 # 8 218 7 195 206 75 29.0 7e-14 MSVEMPEIKIVRHVRARKLRLRVEPASIRLTVPLFCSKKQIQQFLAQSEQWLIETWNKQH HVQSTSFEIPSEISFFNREQPFQIVVQKQHRIFQFDWEDSYLFIKDQQPYQALQNAVIAY AKQELPALLSELSQKTRLSYAECTIRRPKTRWGSCSSQHNIMLHAGLVLMPAQITRYVCI HELAHTKHFDHSPAFWAEVAKFDPNYMQHRRQLKGNPLPAWWYVTT >gi|333032589|gb|GL891837.1| GENE 23 23425 - 24096 1003 223 aa, chain - ## HITS:1 COG:ECs3785 KEGG:ns NR:ns ## COG: ECs3785 COG0120 # Protein_GI_number: 15833039 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Escherichia coli O157:H7 # 6 218 2 215 219 239 62.0 2e-63 MSLYATQDEKKQAAAKAALKHLPKGGILGVGTGSTVNFLIDLLPELQLEAAVASSQATAD RLKKLGIEVVDMNHVGSLDAYVDGADEIDRHMHMIKGGGAALTREKIVASIAKKFVCIVD DSKWVDQLGRDFPLPVEVIPMARSAVARKLVSLGGDPVYREGVVTDNGNVILDVFNLNIL NAIDLEKTINNIPGVVTNGIFALNPATIAIVATNDGIEERTAQ >gi|333032589|gb|GL891837.1| GENE 24 24204 - 25745 1964 513 aa, chain + ## HITS:1 COG:PA1326 KEGG:ns NR:ns ## COG: PA1326 COG1171 # Protein_GI_number: 15596523 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Pseudomonas aeruginosa # 1 511 12 513 515 560 56.0 1e-159 MLSRVVRQILQATVYDVAIETPLEAAPRISQKLNNTIRFKREDLQPVFSFKLRGAYNRIS QLPKEQLERGVICASAGNHAQGVALSGQRLGIPAIIVMPSTTPDIKVQAVKRLGGQVVLH GDSFDIANKYAQQRAEAEGLVFIPPYDDELVIAGQGTIANEILRQWRDVEYVFVAVGGGG LIAGVAAYLGDVAPHVKVIGVEYEESACLKAALEANERVVLPHVGLFADGTAVAQIGALP FDIVRLRKSDNSGPIVEPDIVTVNTDEICAAIKDTFDENRSIVEPSGAMALAGIKKYVAE HKISGKNMVSIVCGANMNFDRLRYIAERTELGEQREAIYAVTLSEEKGAFLGFCRALQGR NITEFNYRANNTEEAQVFVGISLKGGDTERHEILEQLKQQNYVVDDLSDDEVAKLHIRYL IGGHANLDDERLFRVEFPERPGALLTFLTRLGPTHNITLFHYRNHGAAEGRVLVGLQATD AKQNPDGLIETLEQISYPYAEITDNVGYKRFLK >gi|333032589|gb|GL891837.1| GENE 25 25890 - 26540 550 216 aa, chain + ## HITS:1 COG:BH0597 KEGG:ns NR:ns ## COG: BH0597 COG0569 # Protein_GI_number: 15613160 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Bacillus halodurans # 3 211 4 213 218 152 41.0 3e-37 MAQFAVIGLGSFGATVAQELTRLNHDVIGIDTVKKNVENLADVLTHAVIADATDEHVLDE LNIQNCDAVVVAIGEDIEASILCVLNLKNLGIDKIWVKAKTKAHHTILSHLNINKIIHPE EDMGVRVAQALNYPMVSRYMSLDDEHYIVKIDIPEKLNGINLYGIMQQAPQVKTLLVKRQ QQILFETEETFTLQTHDILILEGHLQQLKKLSNCFI >gi|333032589|gb|GL891837.1| GENE 26 26559 - 27896 1212 445 aa, chain + ## HITS:1 COG:BH0598 KEGG:ns NR:ns ## COG: BH0598 COG0168 # Protein_GI_number: 15613161 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus halodurans # 9 445 13 448 448 340 45.0 3e-93 MSLKPKPHKTLNLSPPSLLALGFLGFIVFGTLLLKLPIANNGHVSWMDALFTATSAVTIT GLSVLNIHESFTLFGQVIILLLIQSGGLGFMTFAILAALSLSPKVGLKQQMMAQDSLGQT SLSKVTFVAKGVVTYTLLFELIGTVILTTAFTPIYGFARGLYYAVFYSISSFNNAGFSLF SNSLVNFQSNYLICITISLLYTLGGLGFLVLMDIKQNKKWKKLSPNSKLILTTIAIINLV AFVLIWVLEAQNPHTLGLLNVGDQALNAWFQATVPRSSGFNTIDTGAMTNSSSLLMMLLM FIGGGSLSTAGGIKVGTFIILVLSVLSFLRRTDEIRVFNHSVSHETTYKALAVTAITSIL IFIGFFILLLLEPKADFMNLLFEVVSAACTVGLSRGITPDLHNGSLFILSLLMFAGRLGP LTLAYLIATPKKSRLKHPQANIQIG >gi|333032589|gb|GL891837.1| GENE 27 27937 - 29088 1228 383 aa, chain - ## HITS:1 COG:NMA2021 KEGG:ns NR:ns ## COG: NMA2021 COG2829 # Protein_GI_number: 15794901 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane phospholipase A # Organism: Neisseria meningitidis Z2491 # 43 380 62 402 409 213 37.0 6e-55 MAFRQFERTSLQLSMGTLLSCLCASVAYADTLAPVKPASVDACVALASNADRLACYDAVF KPSALPVVQAAVVPEPVKKIDKPVVQPETFKEKVVDKVSNIKVIGKAPTLEPTTSLLDQR WELSEKSKLGVWNIRAYQPVYLLPVFWTSDKNEFPSSPNPNNTVTEAQNLKSTESKFQIS LKTKAWENIFGNNGDLWVGYTQSSRWQTFNAEESRPFRETNYEPEASLMFRTNYELLGLD GRLLGVTLNHQSNGRSDPLSRSWNRVIFNVGLERGNFALMLRPWIRLEEDSKDDNNPDME DYIGRGDLTAFYKWKQNDFSLMLRHSLKGGDDSHGAVQFDWAFPISGKLRGHFQLFNGYG ESLIDYNHRATYAGLGVSLMNWY >gi|333032589|gb|GL891837.1| GENE 28 29109 - 32048 3056 979 aa, chain - ## HITS:1 COG:DR0617 KEGG:ns NR:ns ## COG: DR0617 COG1026 # Protein_GI_number: 15805644 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Deinococcus radiodurans # 18 973 30 989 996 480 34.0 1e-135 MTVDVTETISQTVHPAFQLLRQHHVEALDILVSEYKHKVTGAVHYHLATDYDENVFLVAF RTQPMDSKGTAHILEHTALCGSEKFPVRDPFFLMIRRSLNTFMNAFTAADWTAYPFATQN KKDFQNLLSVYLDAAFSANLNPLDFAQEGIRIELENGQPVYKGVVFNEMKGAMSAPSDQL YHQLAHHLFPETTYHYNSGGDPKDIPDLTYEQLVEFYKTHYHPSNAVFMTFGNQTAYELQ EQFEKLALHKFTAGTTLYSKPEKRLTAPVEVTETYAVDGDELKDKTYHVLSWLLPQASDI KLRLGMRLVEGVLLENSASPLRHYLETCGYAQSTGPLMGVDDSNFEMTFYCGVQGSNPEH AESFREGVLNVLREVAAKPIDSSLVDAILHQIELHQREINGDGTPYGLSLILNGLSGAIH HNDPIQIWDVDSAIAQVKEELQDPMWLSNLIQTHLLDNPHRVQMTLVPDATKSAKEQEAE KARLAAIGEKLTEEDKAEIIAKTKALQERQDTPDNLELLPKVGLEDVPADLHIVQGQLRE IICNRMDTPLNLYHAGTNGIYYQQVLIQIPDDVVKSPYFNLLSILMGEVGAGEYDYLELQ NLQTAVSGGLGMGASLRSKVDDKDKISAWLTLTTKSLTQKFDAIHLLKLAFEQLRFDEKE RIIELLQQRKTRWQSRLSGAGHSYAMQIASRNMSALAQRDYQNTGLGALNWLGELVTKIT QDDAAYDALIAELKHIHTKLLQAPKQFLLVCEEHQSERLVEEIQNVWDKLNVDTAATELT QVEQENDNEHEAWLIQTNVQFCASAYQAVEVSHPDAAPLMVLAAYLRNGFLHSAIREKGG AYGGGASYDGNACSFRFFSYRDPRLAETFKDFEASVQWLLNTEQQPHQLEEAILGLVASM DKPGSPAGEAITACYALLHARTPTFRRTLRERLLHVTLEDLQRVARQYLIEQTPVKAVVA PFAKRDELQQLGFTIKQVN >gi|333032589|gb|GL891837.1| GENE 29 32300 - 34396 2190 698 aa, chain - ## HITS:1 COG:RSp1062 KEGG:ns NR:ns ## COG: RSp1062 COG1629 # Protein_GI_number: 17549283 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Ralstonia solanacearum # 31 697 25 694 695 540 45.0 1e-153 MKRSVLFISSVGVMTSHVYALEADQQAVTNLPTISVKADKEISLKQEVGQASSATKGLMQ LKDVPQIVNVVPKQVLREQTVTSMQGALQNVAGLSFSVGDGQRDQVMIRGFSAITDNYVD GIRDDALYFRDMSNVERIEVLKGPASVLYGRGSAGGLVNKINKKPMDQSLREVSLIGSTT GQRRAEVDVNEKVAENVKVRLTGAVEDSDGYRDQAFLKRQAVAPSVQWDITDKTKLLLQA DYLHDNRLADQGFPTDPITGKPVKTNPKTFYGALNGKEVGDVDTEISSQTISLDHEFNDN FKYHGAVRHYNYSLDRQYSVDSHPAADKSKITLTQNKRLRNEDGVYVQQELSALFNTGFL KHNTLIGAEYSKQHKDEILWQGAKTTTDLYNPKLEYWAPINTGTTTARNNNSNTFENYGV YLQDLMTVTDQLKVLVGLRYDNLSQDRDDKTSTNLDLNRTDNTYSPRIGVVYQPVNNISL YTSYNRSFQPLADSFVFYKNSDDLRPTKTENYEIGAKWDVNDQLNVTLALFEMSQTNIQN QDPANPNQALLAGEQKTKGVELSLTGQLTDQLSVLAGYSYMDGKIEKSAIGFTGNHSALT PNNTANLWLKYQINDHWYAAVGGRGESSRFSAPDNKNVLPGYAVVNAALGYQSERYDVNL NLNNLFDRDYFVSGHSGANDSNMMGDPLNAQVALRYRF >gi|333032589|gb|GL891837.1| GENE 30 34634 - 35638 1163 334 aa, chain + ## HITS:1 COG:slr0537 KEGG:ns NR:ns ## COG: slr0537 COG0524 # Protein_GI_number: 16332028 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Synechocystis # 5 330 6 331 333 254 41.0 1e-67 MATVDLFAIGNALIDQEFKVSDDFLSQQGLQKGTMQLSDGETQSALYEKLKQTQDYKGQA SGGSAANTTVAFSALGGSAFYGCRVGHDELGGIYLQGLNDAGIQTTPKSISEGVTGTCMV LISPDSERTMHTYLGITAELSQDQIDFEPLKTAKWLYIEGYLSTSETARKAVKQAREIAK AHGVKIALSLSDPAMVQYAREGLEELMDDGVDLLFCNEQEALMYTNTTTVEDALTQLRFK NHTVVITQSAKGALVANPTHHFHVAGRHVEAVDTNGAGDAFAGAFLYALNHHEDLTAAAQ LAILISSEVVSQFGPRLAINDYAKLLENFQKECA >gi|333032589|gb|GL891837.1| GENE 31 35655 - 35963 385 102 aa, chain + ## HITS:1 COG:PA4711 KEGG:ns NR:ns ## COG: PA4711 COG2146 # Protein_GI_number: 15599905 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases # Organism: Pseudomonas aeruginosa # 2 96 15 108 115 80 37.0 8e-16 MTEEVPEREARAFDTLQGTTIFITQRDGSFYAYQNLCPHLQTELEYLENQFLDQDQEYIQ CSTHGALFNVETGECISGPCLGEFLNKVEIKVHSDGGIYIVD >gi|333032589|gb|GL891837.1| GENE 32 35989 - 36597 305 202 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001528 NR:ns ## KEGG: ABBFA_001528 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 202 1 202 202 355 100.0 5e-97 MADFFFNYYLMPFHLSVVALILLSVVETIGMYVGLRPSQLLKKIAPVWLTNSPLLNVKFS KALIFVFLLINFSFAGYFLQLSFFAIQHYFITPFYLIIPALVIAIFFTVFMIHCLDQVIK PKLTHTNYNLLGRLATISSGSARPGFSAQARVRDEFGQLHYVQVEPEYGELELYSQVILI KVHKSHYVAKKISVSNDLFAPD Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:39:43 2011 Seq name: gi|333032588|gb|GL891838.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld34, whole genome shotgun sequence Length of sequence - 26602 bp Number of predicted genes - 28, with homology - 28 Number of transcription units - 13, operones - 6 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3 - 62 8.2 1 1 Op 1 . + CDS 137 - 532 291 ## ACICU_03215 hypothetical protein + Prom 592 - 651 2.8 2 1 Op 2 . + CDS 703 - 1266 462 ## ACICU_03214 hypothetical protein + Prom 1314 - 1373 5.2 3 2 Tu 1 . + CDS 1403 - 2566 1108 ## COG1960 Acyl-CoA dehydrogenases 4 3 Tu 1 . - CDS 2598 - 3197 795 ## COG1309 Transcriptional regulator - Prom 3231 - 3290 2.8 + Prom 3181 - 3240 3.7 5 4 Op 1 . + CDS 3384 - 5189 1810 ## ACICU_03211 hypothetical protein 6 4 Op 2 1/0.143 + CDS 5195 - 6097 213 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 7 4 Op 3 6/0.000 + CDS 6100 - 7713 1711 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 8 4 Op 4 10/0.000 + CDS 7756 - 8913 1264 ## COG1960 Acyl-CoA dehydrogenases 9 4 Op 5 2/0.143 + CDS 8924 - 9760 1082 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 10 4 Op 6 . + CDS 9779 - 11719 1873 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit + Term 11728 - 11767 1.6 - Term 11768 - 11814 1.2 11 5 Op 1 . - CDS 11822 - 12478 750 ## ACICU_03203 hypothetical protein 12 5 Op 2 13/0.000 - CDS 12496 - 12924 661 ## COG2969 Stringent starvation protein B 13 5 Op 3 6/0.000 - CDS 12931 - 13584 358 ## PROTEIN SUPPORTED gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase - Prom 13676 - 13735 3.8 - Term 13690 - 13740 4.4 14 5 Op 4 59/0.000 - CDS 13755 - 14141 639 ## PROTEIN SUPPORTED gi|169634295|ref|YP_001708031.1| 30S ribosomal protein S9 15 5 Op 5 . - CDS 14154 - 14582 745 ## PROTEIN SUPPORTED gi|126643019|ref|YP_001086003.1| 50S ribosomal protein L13 - Prom 14637 - 14696 6.5 + Prom 14674 - 14733 7.8 16 6 Op 1 12/0.000 + CDS 14755 - 15738 423 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 17 6 Op 2 2/0.143 + CDS 15762 - 16574 872 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 18 6 Op 3 . + CDS 16575 - 17414 927 ## COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases + Term 17415 - 17456 7.5 - Term 17411 - 17436 -0.5 19 7 Tu 1 . - CDS 17456 - 17899 572 ## COG4731 Uncharacterized protein conserved in bacteria - Prom 17921 - 17980 2.7 20 8 Op 1 . - CDS 17984 - 18658 695 ## COG1346 Putative effector of murein hydrolase 21 8 Op 2 . - CDS 18669 - 19040 362 ## ABBFA_000521 hypothetical protein 22 8 Op 3 . - CDS 19083 - 20417 665 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 - Prom 20493 - 20552 7.2 + Prom 20473 - 20532 8.5 23 9 Tu 1 . + CDS 20621 - 21430 653 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase + Term 21450 - 21491 2.5 24 10 Tu 1 . - CDS 21431 - 23056 1276 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Prom 23040 - 23099 5.3 25 11 Tu 1 . + CDS 23163 - 24173 948 ## COG1408 Predicted phosphohydrolases + Term 24183 - 24214 1.0 - Term 24164 - 24209 10.1 26 12 Op 1 6/0.000 - CDS 24221 - 24700 414 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 27 12 Op 2 . - CDS 24715 - 25815 901 ## COG2199 FOG: GGDEF domain - Prom 25855 - 25914 3.7 28 13 Tu 1 . - CDS 25944 - 26447 312 ## ABAYE0502 hypothetical protein - Prom 26537 - 26596 6.7 Predicted protein(s) >gi|333032588|gb|GL891838.1| GENE 1 137 - 532 291 131 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03215 NR:ns ## KEGG: ACICU_03215 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 131 1 131 131 263 100.0 1e-69 MQWIVVKTFSFPYEAQIAKTQLEAFGIPAYIENEHTINMDWFYSNALGGVRLLVPENYVD EAKLFLEKDFSDELEQKFGENKEYCPECGSLDIEVNTKGKKSAFLVFMFFGLPLFSFKNG SKCKRCGHFWN >gi|333032588|gb|GL891838.1| GENE 2 703 - 1266 462 187 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03214 NR:ns ## KEGG: ACICU_03214 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 187 1 187 187 375 100.0 1e-103 MMTKKQLTSKQIDMLLELLKNRFEKNIHRHKEIDWTNVRAKLIESPDKLWTLQEMENTGG EPDVVAYNKQKDEYLFVDCSAETPQGRRSLCYDREALESRKDHPPKNSAIDLVQEIGAEL LTEEQYHQLQQLGEFDLKTSSWLATPEEIRKLGGALFADRRYGRVFIYHNGAQSYYAARG FRCCLRV >gi|333032588|gb|GL891838.1| GENE 3 1403 - 2566 1108 387 aa, chain + ## HITS:1 COG:PA1535 KEGG:ns NR:ns ## COG: PA1535 COG1960 # Protein_GI_number: 15596732 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 7 386 7 381 382 372 51.0 1e-103 MQLNPIYYNEQHIAFADNVRRFVQKEMTPFVNEWDEAETFPRELYKKAAEIGLLGLGFSE EYGGIPDADPFYSLLAGIEMAKAGSGGVHISLMVHTIGAPPIQHFGSEELKARVLPGIIS GEKISALAITEPGGGSDVAALQTKAVRDGDYYIVSGEKTFITSGIRADYYTVAVRTDPTK TGAEGISMLLIDAHSEGITKTPLKKMGWWASDTAHLHFDQVRVPASNLLGKENAGFKVIM NNFNMERFFLGVVAYGYALVCYEEALEWAQQRKTFGKRLIDHQVVRHKLVDMATQLTSTR ALLEETAWKMTQPKLQGPELVVQISMLKNVATRTMQFCADAAVQTLGGMGFMRGTKSERI YREVKVNMIGGGAEEIMKDLISKQLGY >gi|333032588|gb|GL891838.1| GENE 4 2598 - 3197 795 199 aa, chain - ## HITS:1 COG:PA2885 KEGG:ns NR:ns ## COG: PA2885 COG1309 # Protein_GI_number: 15598081 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 17 199 14 196 198 195 51.0 4e-50 MIATSIEQIPNIPCFDDSPRGRLLHGAAYLFHKQGYDKTTVRELAQFIGIQSGSLFHHFK SKDDILAHVMEQTIIYNLARLNDAATQSTDPEQQLRALIKAELISITGDTGAAMAVLVYE WFALSKEKQDYLLKMRNEYEQIWLDIIEKLRTQGKVKHDAFIWRRLIGGAISWTVTWYKS EGKVKIDELTEMVWEMALK >gi|333032588|gb|GL891838.1| GENE 5 3384 - 5189 1810 601 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03211 NR:ns ## KEGG: ACICU_03211 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 601 1 601 601 1201 100.0 0 MANNQQDDHRVVKIGCASGFWGDTNTAAFQLVHLTDINYLVFDYLSEITMSIMAKAKMVE PKHGYALDFVSRVMAPLLKKIAEKKIKVISNAGGVNPLACRDALQKIIKEYGLDLKVAVV LGDDLLPKHEQLKSQNIQEMFSGEALPEQVASSNAYLGAVAIRDALDLGADIVITGRVVD SAVVLAPLLHEYQWPLDDYDKLAQGSLAGHVIECGAQCTGGNFTDWQLVQGFDNMGFPVV EVSEDGSFVVTKPQGTGGLVSTATVAEQIVYEIGNPQAYLLPDVIADFSHVHLEQVGEHR VRVTGAKGQAPTTQYKVSATYPDGYRVLVSFLIAGREAPQKAQVIADAILTKCERVLAMR SVPPFSEKSVEILGIESTYGDHAQTLNSREVVVKIAVKHMFKEACMFFASEIAQASTGMA PALAGIVGGRPKASPVIKLFSFLIDKNQVNVEIDFDGQRHAVEIPQGVSTEQLLTLTAGE NAVYQGDEIEVPLIEIAHARSGDKGNHSNIGVIARKADYLPWIRAALTEQSVASYMQHVL DAEKGRVIRYELPGLNALNFMLENALGGGGVASLRIDPQGKAFAQQLLDMPVKVPAHLLE K >gi|333032588|gb|GL891838.1| GENE 6 5195 - 6097 213 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 20 260 4 239 242 86 29 1e-16 MDETKMSYQSIFRPDAFANKVIIVTGGGSGIGRCTAHELAALGAQVVITGRKIEKLEKVS QEIIEDGGLVHFIVCDNREEEQVKNMIAEVIEKFGKLDGLVNNAGGQFPSALENISANGF DAVVRNNLHATFYLMREAYNQWMVKHGGSIVNMTADMWGGMPGMGHSGAARSGVDNLTKT ASVEWGKSGVRVNAVAPGWIVSSGMDNYSGDFAKVIIPSLAGNVPLKRMGTESEVSSAIC YLLSDAAAFVSGVTLRIDGAASQGTRMYPLGEATNSESYNGFHRAFIPEIFQKKTEAEEE >gi|333032588|gb|GL891838.1| GENE 7 6100 - 7713 1711 537 aa, chain + ## HITS:1 COG:PA2888 KEGG:ns NR:ns ## COG: PA2888 COG4799 # Protein_GI_number: 15598084 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Pseudomonas aeruginosa # 1 537 1 538 538 688 65.0 0 MTILPSEIAVGSEQYQRNKEALLAQLSEVRAIQQKSIDKSYAAKAKFDKKGKILPHERVR LLLDADSPFIELCGLVGYNMHDDKDGSEAGGGVIAGIGFVSGVRCLVSASNSAIKGGTMS PMGVQKTLRLQKIALEQKLPMITLTESGGANLNYAAEVFTYGGMTFANQARLSAAGIPQL AVVHGNATAGGAYQPGLSDYVIAVRKQTEMLLAGPPLLLAATGEVATAEELGGAEMHAQV AGTAEYLAENDADGIRLAREIFEHLNWKEQNKPVDVTYKEPRYDTEELLGVIPSDPKQPF DMKEVVARIIDDSDFLEFKLEYDDLTVCGWAKIGGLHIGIITNNGPITPQGAAKAAQFIH LCEQTNRPLLFLHNTTGFMVGTDAEQNGIIKHGSKLIQAVANCTVPKISIVVAGSYGAGN YAMCGRSLSPDFIFAWPNSHVAVMGAAQAGKVLRIVAEGKQKASGQEPNPQMLDFLEQST AMKLEQQSTALFNTAMLHDDGIIDPRDTRKLLIFLLQTIYEAQQRELNPTRFGVSRF >gi|333032588|gb|GL891838.1| GENE 8 7756 - 8913 1264 385 aa, chain + ## HITS:1 COG:PA2889 KEGG:ns NR:ns ## COG: PA2889 COG1960 # Protein_GI_number: 15598085 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 385 1 385 386 601 73.0 1e-172 MKFTAEHEALRRTARQFVENELNPNIPEWEEAGRFPIHDVFKKMGDLGLLGICKPEENGG LALDYSYNLVVAEEIGRAACGGVPLAIGVQTDMATPALARFGSKELRDEFLTPAIAGEYV ASIAVSEVHAGSDVAAIKTTAKKDGDDYVINGSKMWITNSLQADFFCLLANTSDDKPHVN KSMIIVPAKTKGISFSEPLNKLGMRSTTTAQVYLDNVRVPQRNLVGVEGMGFMMQMMQFQ EERLWACANAIGGLENLIQKTIAYTKERTTFGQPLINNQYIHFRFAELMTEVEALKALTY QACEQHIAGEDVTKLASMAKLKAGRLSREVADSCLQYWGGNGFMWDNPASQLYRDGRLGS IGGGADEIMLGIICKLMDILPKKQK >gi|333032588|gb|GL891838.1| GENE 9 8924 - 9760 1082 278 aa, chain + ## HITS:1 COG:PA2890 KEGG:ns NR:ns ## COG: PA2890 COG1024 # Protein_GI_number: 15598086 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Pseudomonas aeruginosa # 14 275 7 263 264 275 57.0 7e-74 MTLSASLQALDIDDSIQLEQDGSILYLWLNRPESRNAMNLNMVNAIQQVFTAIRNDLSIR AVIIRGEGGTFCAGGDIKDMAALRVESTNIGSLQPYTDFNRRFGAMLEQVEAAPQTVVVI LEGAVLGGGFGLACVSDVAISRDNAQFGLPETGLGVIPAQIAPFVVKRIGLTQARRLALL GMRFEGHTALSVGVVHQIAHNEIELEQALQETIQHIKRAAPQASRVTKALLHRTLNEPLN ELLDDAAQQFAQAVGGAEGQEGTMAFIQKRLPNWADGS >gi|333032588|gb|GL891838.1| GENE 10 9779 - 11719 1873 646 aa, chain + ## HITS:1 COG:PA2891 KEGG:ns NR:ns ## COG: PA2891 COG4770 # Protein_GI_number: 15598087 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Pseudomonas aeruginosa # 3 645 4 658 661 702 54.0 0 MKFSKILVANRGEIAVRVMQTAKAMGYQTFAVYSDADRNARHVQEADEAVYIGASKVSES YLSIAKIIEACKKTGADAVHPGYGFLSENTDFAQACIDNQITFIGPTASAIELMGSKRLS KIAMIEAGVPCVPGYEGDRQDLEYLATQAEQIGFPIMVKASAGGGGRGMRLVQQASELFE ALQTARSEAENAFGSGELILEKAVIAPRHVEIQVFGDTHGNYVYLFERDCSIQRRHQKVV EEAPCPVMTPELRQKMGEAAVAAAKACAYVGAGTVEFLLDASGAFYFLEMNTRLQVEHPV TELITGLDLVEWQLRVANGEQLPLKQQELTLNGHAIEVRLYAEDPRQDFLPQTGQILRWK PAALPNVRIDHGMLATDEVSPFYDPMVAKVIAYGKTREDAIRLLARAVDDSVLLGVNSNK QFLVNLLRHPVVVTGDTNTAFIQQHFQNDPSLHHQVLSLETLAIAAALFSQSKGTAVWQT GLGVPLPLKLQTADQQIQLQLSSVNNIFTVQFCDQTVVIDVLEKTPEQLVYLIDGVRRRV QYVLDDDQLYLDRDNGNVLIRNMTYAAPEATDVAGDGKIRAPMDGAVVNILVNEGDQVVK GQTLLILEAMKIQQQIKSDVDGVVAEILGQQGQQVKKRQMLFSIQI >gi|333032588|gb|GL891838.1| GENE 11 11822 - 12478 750 218 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03203 NR:ns ## KEGG: ACICU_03203 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 218 1 218 218 398 100.0 1e-109 MAFDLVQYFAEQIKIQKPQLLNQYPANEKNKLIDEVNILTLGKLISLWRQDDNKIYHEIK TADPLYIQEVARHLTTSKHNKSVLKNSELEQSISEILALQLTELNQLDETGGFGQSGLKE LILGQVEHLSGQAEDWVWSTNHLTELIGSKPVEQEELSLDATMKEFNQMVHQAQPHHEDL HVEEQPIETFIPAWSKVIAPLVALAILGYLYCMYTQLV >gi|333032588|gb|GL891838.1| GENE 12 12496 - 12924 661 142 aa, chain - ## HITS:1 COG:STM3341 KEGG:ns NR:ns ## COG: STM3341 COG2969 # Protein_GI_number: 16766636 # Func_class: R General function prediction only # Function: Stringent starvation protein B # Organism: Salmonella typhimurium LT2 # 7 109 5 107 166 134 60.0 5e-32 MSEQTIELTPTRPYLARAIYEWICDNQLTPYLLVDATQPHTDVPQQFVKDGQIVLNIVPH AVHQLLISNDAITFSARFGGVSKDIYVPIQAVLGIYARENGQGLFFDPEEYANVAPVEDK LDSETQETSEPTKKKPTLRILD >gi|333032588|gb|GL891838.1| GENE 13 12931 - 13584 358 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|46133488|ref|ZP_00157281.2| COG0625: Glutathione S-transferase [Haemophilus influenzae R2866] # 1 202 1 200 212 142 35 2e-33 MSVENTSIQGITLYSHADDFRSHWIRFLLAEKQIKYQLIVTDHEDEDLASLNPYNQLPML VEQNLKLFSAPIIAEYLDDRYRQNKLYADAPMARAEQRQYIWRLENDWFKLADHMLRHAD TLNVEQKQKAQKELRDTLISLTPLFQHFPYFMSENFSILDCMLAPIFVRLNSMGIDLPKQ QCRPIFLYCKRIFNRPSFVKSMTPQEKTRYNELLNME >gi|333032588|gb|GL891838.1| GENE 14 13755 - 14141 639 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634295|ref|YP_001708031.1| 30S ribosomal protein S9 [Acinetobacter baumannii SDF] # 1 128 1 128 128 250 100 6e-66 MATNYGTGRRKTATARVFLSAGTGKLVINNRTLEQYFGRETARMVVRQPLELLEATEKYD LYITVKGGGIGGQAGAIRHGITRALIAADETLKPVLRQAGFVTRDAREVERKKLGLRKAR KRPQFSKR >gi|333032588|gb|GL891838.1| GENE 15 14154 - 14582 745 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643019|ref|YP_001086003.1| 50S ribosomal protein L13 [Acinetobacter baumannii ATCC 17978] # 1 142 1 142 142 291 100 3e-78 MKTLSAKPAEVQHDWFVVDATGKTLGRLATEIARRLRGKHKTSYTPHVDTGDYIIVINAE QVQVTGNKALDKKYYRHTEFPGGLKETNFEKLVAHKPEEIFERAVKGMLPKGPLGYAMIK KMKVYAGSEHPHAAQQPQVLDI >gi|333032588|gb|GL891838.1| GENE 16 14755 - 15738 423 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 11 327 11 329 346 167 32 7e-41 MSGVIVLPLYVTSGEPAGIGPDICLSLAKRVDERPVVVLADRNLLQQRAQKLGLDIKFLE YSGQAESSLQGELYIEHVPLETIVVDGQLNAANAAYVLEQLRRSADYAMSGKSVGVATAP VQKSVINDAGILFSGHTEYYQEFAGVERVVMMLATKTLRVALATTHLPLRDVADAITKER LHQVIDILLHDLKTKFKINDPRVLVCGLNPHAGEDGYLGREEIDTVNPVLESYRSQGVKL SLSLPADTLFTPEHLKNADAVLAMYHDQGLPVLKSQGFGEAINITLGLPFIRTSVDHGTA LSLAGTGLAKSSSLNVAVDLALSLAAS >gi|333032588|gb|GL891838.1| GENE 17 15762 - 16574 872 270 aa, chain + ## HITS:1 COG:VC0443 KEGG:ns NR:ns ## COG: VC0443 COG0030 # Protein_GI_number: 15640470 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Vibrio cholerae # 13 270 19 276 282 289 58.0 3e-78 MYQINALNPKDEGHKARKRFGQNFLHDQRVIAKIVRSVNPRTGDNIVEIGPGLAALTSPL IGECDALTVVELDRDLAAGLPERVPHPERLTIVEADALKYDFSQLVKDGRPLRVVGNLPY NISTPLLFHLLEFGSQVKDMHFMLQKEVVERITAEPNTKEYGRLSVMIQYYCQPTFLFEV PAGAFNPPPKVTSAVFRLVPYEQKPITAKDEKALARLVAHVFTQRRKTLRNSLKGMLAED GFEKAGVDPMARPETLTLAEFVALADQMVA >gi|333032588|gb|GL891838.1| GENE 18 16575 - 17414 927 279 aa, chain + ## HITS:1 COG:YPO0490 KEGG:ns NR:ns ## COG: YPO0490 COG0639 # Protein_GI_number: 16120820 # Func_class: T Signal transduction mechanisms # Function: Diadenosine tetraphosphatase and related serine/threonine protein phosphatases # Organism: Yersinia pestis # 7 273 4 265 289 225 44.0 6e-59 MTKRYNYVIGDVQGCFEALKALLKEIRFDPDQDFIWFAGDLVARGENSVGALRFIKKLAD RGAAATVLGNHDLTLIAGARGLKEIKEKDRTQDVIDAVDGDDLIDWLRKQPLCLFPNEQT ILTHAGVPCIWDAQKTAALAKEVEAVLAHDDLSVLDAFLAEMYGSKPDLWTDDLTGNERL RCITNYLTRMRLTNAEGALEFSFKDTLDAPMPEGYLPWFEFPSKAAQTHQIFFGHWAALE GRTISEHIQNVDGGCVWGKNLIAYRLEDQQVFSVSNPVM >gi|333032588|gb|GL891838.1| GENE 19 17456 - 17899 572 147 aa, chain - ## HITS:1 COG:RSc2798 KEGG:ns NR:ns ## COG: RSc2798 COG4731 # Protein_GI_number: 17547517 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 25 145 33 150 152 105 42.0 2e-23 MGKFFVGALLLVGINTATFAADITGLWQTIDDKTGTPKAHVEIRKEANGTYAGKIVKITP RPGYTPKEICDNCPAPYTNKPILGLDIATGLKQTDNSTYTGGKILDPNTGKVYGLKAKLS ANGKRLHMRGYLGVSALGRNQIWIRLE >gi|333032588|gb|GL891838.1| GENE 20 17984 - 18658 695 224 aa, chain - ## HITS:1 COG:RSc2670 KEGG:ns NR:ns ## COG: RSc2670 COG1346 # Protein_GI_number: 17547389 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Ralstonia solanacearum # 5 215 17 232 240 89 36.0 4e-18 MFMILYGFLITLVGYLCAKPLNRRFPQVPLLVFGMFIVIGLLSILKVPYEEYRLYVNDLF SHLLGYVTVALAIPLAAMRYDDLPLKSVIGILCFASISAVALPMGLAYLLHMSEPTILAF ATRAVTTPIALNIATLLHAPETLVTLIVILSGVIGAAFSPFLLKHIHDERASGLALGLAA HAIGTAQAWQRGPVAGRYAAFGMALNGVFTAIWLPTFMLSFGIH >gi|333032588|gb|GL891838.1| GENE 21 18669 - 19040 362 123 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000521 NR:ns ## KEGG: ABBFA_000521 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 123 1 123 123 200 100.0 1e-50 MDKIKSIDWAAWVGTLLLIIGFREGSVVVMRAFGHPELGNLVGLISLLIVLLIWRKFKKI PLRLVDTNNKVMKESGFAFLPICAGSLIMLVHMGKEIPLFLFVLVVSTLIPLWVYAKMAK HWL >gi|333032588|gb|GL891838.1| GENE 22 19083 - 20417 665 444 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 39 398 43 407 425 260 42 6e-69 MEYVDRHQGGERTILVSVSVQLLDDLDAEEFALLAQSAGADILEHIKVQRNKPDPKFFIG SGKVDEIAEQVQDLEASLVIFDHALTPAQERNLEKILKCRVIDRTGLILDIFAQRARTHE GKLQVELAQLKHLSTRLIRGWSADFEQQKGGIGLRGPGESQLETDRRLIRVRITQLKDKL EKVHQTRMQGRAARQKASIPTVSLVGYTNAGKSTLFNILAKSDVYAADQLFATLDPTLRR LEWDGIGTVVLADTVGFVRNLQHDLVESFKATLEETLEATLLLHVIDSSSHDMLDQIEAV EGVLKEIGADAPVLRVYNKIDLSGEEAKIIYSEPHVPDRVYVSAHSGLGLDLLRQAVQEC LMGQLQHFSLVLKPAYGKLRTQLYALNVIQSEHYDDEGLLHIDIRIAPHKLEQLIRQAKL PIDEILGERASQFKRPLEEFEIKH >gi|333032588|gb|GL891838.1| GENE 23 20621 - 21430 653 269 aa, chain + ## HITS:1 COG:PA4351 KEGG:ns NR:ns ## COG: PA4351 COG0204 # Protein_GI_number: 15599547 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Pseudomonas aeruginosa # 51 251 40 239 258 176 43.0 5e-44 MTQTQSIVNSTLKKFSKIGLYGKKVTSATAAISEGFYLVYRHGLYKDPNNPVNTRYVQYF CRRLCQVFNLEVQVHGTIPREPALWVSNHISWLDIAVLGSGARVFFLAKAEIEKWPILGN LAKGGGTLFIKRGSGDSIKIREQITEFLKQNIPVLFFPEATTTDGHSVKRVHGRLLGAAI EAQRPVQVCLICYVNRHGELDTVAPFIGEMSFVEHIQRVLEMPKVTAHLLTLPPISVEGH DVKSLTQEVQEKMVEGLAQLHKKVLKPKI >gi|333032588|gb|GL891838.1| GENE 24 21431 - 23056 1276 541 aa, chain - ## HITS:1 COG:STM1148 KEGG:ns NR:ns ## COG: STM1148 COG1502 # Protein_GI_number: 16764504 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 59 538 22 491 494 355 40.0 2e-97 MAQSFHSKQLQTHQLANGFLIKASIVVCSSFAVALTGCSTLPKHSPEPIQYARDIDTSQT SLSKIITPLREKNPNLTGYHLLNDPLEALAARLRLIDKAEKTLDLQYYIWDNDKVGALAL HAIIRAADRGVKVRLLIDDNNAKKMEGVLLALSQHKNIEVKLFNPYRFRKYRAMDMILDL KRINRRMHNKSFIADNQVALIGGRNMTNQYYNVSDSYQFSDVDVMLVGAAVDDIVNSFDD YWNHEYAYSVQSIVSAQQHRLRYESLKQQLDAHYQQATVQNFLDLTSRSHAFDKWLDRNI KFDWVKAEVVKDSPDKIRSKAKKEEHLNFQLINHLEKPESNVDLISAYFIPEKQGAKILS TLAKEGVEVRVLTNSFKANDVAVVHAFYGKYRKELLKNGVQLYEFLPTPDKRDLNKNTDE LATKAKVNMKGLSRSSLHTKLMALDEQVFIGSFNFDPRSAYLNTEIGVILDSPSLAKTIH HTMDENLNKYAYKLKLDPNNHIYWQQETPKGPVIYKKEPEMKWWQKAGMKLLSWLPLEGF M >gi|333032588|gb|GL891838.1| GENE 25 23163 - 24173 948 336 aa, chain + ## HITS:1 COG:BS_ykuE KEGG:ns NR:ns ## COG: BS_ykuE COG1408 # Protein_GI_number: 16078469 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 87 335 30 283 287 90 26.0 5e-18 MWNPNSIIFCFYLIFSILALWGIIEAWVHQSRTETIHPFKAFVHLLAFYLSYLLIPLWFF NLYAGWIGYYSIHETIFIFLLSGILIYARFIEPHMVRVDVHQYRLNPDRRFAKPVKVALI ADLHIGLFSGHERQLKIIVKKLNEQQPDLVVVAGDWTYEPEDKLVQELSVLKDIKAPVYS VPGNHDEQYPGPPIQQLLKDALHYNDVMDIEGKIVEFDEFRLIGIGDLWAGKTDMRSMPD LPQDKPWLILSHNPDTVDMVPKLPNRPLMLSGHTHGGQVELPWVTNYIMKKVSILGHKRG FYSHEHADVFVTVGTGMVGIPLRFRVPPTIDIIELV >gi|333032588|gb|GL891838.1| GENE 26 24221 - 24700 414 159 aa, chain - ## HITS:1 COG:PA1119 KEGG:ns NR:ns ## COG: PA1119 COG2885 # Protein_GI_number: 15596316 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Pseudomonas aeruginosa # 3 157 9 165 168 113 39.0 2e-25 MNTRSLKLSFIALLCIALAGCLSFGPLKYRQVKMLKKEGFVLTNEGWTLGLPERLLFDFN DATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVGNPEYNQKLSEERAQSVANLFLTH GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVIIP >gi|333032588|gb|GL891838.1| GENE 27 24715 - 25815 901 366 aa, chain - ## HITS:1 COG:YPO0449_2 KEGG:ns NR:ns ## COG: YPO0449_2 COG2199 # Protein_GI_number: 16120778 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Yersinia pestis # 168 364 1 202 211 147 40.0 4e-35 METYAKQNLQLLSHTLLERIQPAVVFNDKITIEQILNEYTNDHSIRAIHIYDSEHHLIAQ SFKLSSQTSVLEKWFDHWFLNEPVHLTIYHHQQNVGELTLFGSSEKILQFLKMIMVGLAI AMLFIVCALWWSVNLTYRQIMQAIYPLTNIAQIVSEQKAYNLRFPYNRIKEFQDLNTVFN ELLEEIQIWDNQLQKENRKLSFQAHHDQLTLLPNRHYFYQILLDMFEDKDFDNKSALLFI DNNNFKSINDQFGHLAVDEVLKEMAKRLQTRLRHQDFIARLGGDEFAVILHSITHADHLI SIAENLLESCKEPLHLNDQTIYFSFSVGIALSQFASSPEDFIMQADQAMYKAKTSEQHWF IYKPEN >gi|333032588|gb|GL891838.1| GENE 28 25944 - 26447 312 167 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0502 NR:ns ## KEGG: ABAYE0502 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 167 1 167 167 301 100.0 7e-81 MWHSAKKVLFCILVVFATSGPAYANSKHNFYVLTLSILSYSKWENVSTPTLCVIDNASIT STFQSYIQQLSYNYRVQTVNAKDFSKSHCQAVYFSTTPPQQQQNLIQNYPYRSLLSLSIN NPECEVGSIFCLYNQNNYTTFKVNLDALSHSKVHIDPRVLLLAKNAE Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:40:15 2011 Seq name: gi|333032587|gb|GL891839.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld35, whole genome shotgun sequence Length of sequence - 26790 bp Number of predicted genes - 22, with homology - 22 Number of transcription units - 16, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 673 423 ## ACICU_00862 putative ABC oligo/dipeptide transport, ATP-binding protein 2 1 Op 2 . + CDS 738 - 1601 449 ## COG0338 Site-specific DNA methylase + Prom 1926 - 1985 5.4 3 2 Tu 1 . + CDS 2055 - 2942 513 ## ACICU_00864 hypothetical protein + Term 2998 - 3034 5.0 4 3 Tu 1 . - CDS 2947 - 3195 145 ## ACICU_00865 hypothetical protein - Prom 3269 - 3328 5.0 5 4 Tu 1 . - CDS 3530 - 3814 211 ## ACICU_00866 hypothetical protein - Prom 3935 - 3994 11.2 - Term 4263 - 4298 -0.2 6 5 Tu 1 . - CDS 4461 - 5807 1127 ## ACICU_00869 hypothetical protein - Term 5825 - 5864 3.4 7 6 Op 1 4/0.000 - CDS 5885 - 7270 1501 ## COG0477 Permeases of the major facilitator superfamily - Prom 7331 - 7390 3.8 - Term 7400 - 7433 2.1 8 6 Op 2 . - CDS 7443 - 8387 1212 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase - Prom 8462 - 8521 5.2 + Prom 8473 - 8532 5.0 9 7 Tu 1 . + CDS 8575 - 9465 791 ## COG0583 Transcriptional regulator + Term 9559 - 9600 4.5 10 8 Tu 1 . - CDS 9480 - 9755 206 ## ABAYE2875 hypothetical protein - Prom 9897 - 9956 4.3 + Prom 9956 - 10015 5.2 11 9 Tu 1 . + CDS 10076 - 10783 653 ## COG3619 Predicted membrane protein + Prom 10817 - 10876 4.5 12 10 Tu 1 . + CDS 10907 - 12820 1620 ## ABAYE2873 hypothetical protein - Term 12828 - 12865 5.5 13 11 Op 1 . - CDS 12875 - 14209 1096 ## COG0531 Amino acid transporters 14 11 Op 2 . - CDS 14215 - 15093 1118 ## COG2040 Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) - Prom 15122 - 15181 5.8 15 12 Tu 1 . - CDS 15310 - 15684 273 ## ABAYE2870 hypothetical protein - Prom 15778 - 15837 5.8 - Term 15805 - 15846 8.3 16 13 Tu 1 . - CDS 15872 - 17512 1858 ## COG0579 Predicted dehydrogenase - Prom 17723 - 17782 8.0 - Term 17968 - 18018 10.1 17 14 Op 1 10/0.000 - CDS 18023 - 19681 1754 ## COG2303 Choline dehydrogenase and related flavoproteins - Prom 19709 - 19768 2.6 - Term 19693 - 19737 8.0 18 14 Op 2 6/0.000 - CDS 19777 - 21249 1629 ## COG1012 NAD-dependent aldehyde dehydrogenases 19 14 Op 3 . - CDS 21242 - 21865 377 ## COG1309 Transcriptional regulator - Prom 22086 - 22145 4.6 + Prom 21935 - 21994 7.7 20 15 Tu 1 . + CDS 22131 - 23753 1248 ## COG1292 Choline-glycine betaine transporter + Term 23790 - 23848 4.8 + Prom 23765 - 23824 5.1 21 16 Op 1 . + CDS 23871 - 25937 1425 ## COG1292 Choline-glycine betaine transporter 22 16 Op 2 . + CDS 25949 - 26563 492 ## ABBFA_002679 MarC family integral membrane family protein + Term 26575 - 26639 6.0 Predicted protein(s) >gi|333032587|gb|GL891839.1| GENE 1 2 - 673 423 223 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00862 NR:ns ## KEGG: ACICU_00862 # Name: not_defined # Def: putative ABC oligo/dipeptide transport, ATP-binding protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 223 351 573 573 425 100.0 1e-118 KTNIYYEDDEAYEFFKALIRERNINKIIDPMKEITLGCKSYMDLIKRNVAEFSRNSIIIF DGDEKEGNKFKNTLCLPGTLPPDQLLFDFLYRLPADDMYWKNNKISFSKPVFLRIASPIL EFFNLDQTPTENYDLETIILEKRASSSESGGKAREKFKNFYKNEIIQSLIKGKISDNPFR VMIDYNPEKYNTFQEDFKKTLLYVISTNHPTMKDSIKDFLKIK >gi|333032587|gb|GL891839.1| GENE 2 738 - 1601 449 287 aa, chain + ## HITS:1 COG:sll0729 KEGG:ns NR:ns ## COG: sll0729 COG0338 # Protein_GI_number: 16332213 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Synechocystis # 4 269 18 281 285 89 26.0 5e-18 MSVDTFFTPLRYPGGKGKFAPVVKSIFNFNGLKGGHYLEPYAGGAGVALDLLYSGFVSDI HINDIDIAVYSFWKSITEHTDDFLKLLHDSPITIDEWHKQKYILNDWSCTDHLLKGFAAF FLNRTNRSGILKGGVIGGKKQDGNYTLDARFNKANLSKRIEKVGANASRIHVYNEDALML IQKVDEFLPDNSLVYLDPPYYVKGQGLYRNFYVHEDHVKIREALDKIKSKWIVSYDNCDE IKEIYKNYQMTDYDLNYSAYHRIKAKEVMFFCDGLKNPQEYDLFSAI >gi|333032587|gb|GL891839.1| GENE 3 2055 - 2942 513 295 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00864 NR:ns ## KEGG: ACICU_00864 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 295 22 316 316 538 100.0 1e-151 MTKAIVAIGVLCLVAYLLTIGYIPSEISFGDTLIFLLIFAAFSIAYAVLGFMLFFFGTSL APVTYLVLSWVDKYLPPHIRIGKKLPFPKINIITLIGSLYLLYVIHGIFLLHWKVNLYIG ITVFFIAFAYYPFYMNRQKIKEFNIKFENLADIVDDPDASENLKAFARKKLKRLETHIRD SLEIAFFISLTPLVPLILIGDVGKAFLNYTMQNTGVRIEKATLYIKEPYANLIELPRTTT KELSQYKTFIFKDVKVLFQGIGKSTLVSYKLKDIEKQLVIPNEYITVERSKKIEE >gi|333032587|gb|GL891839.1| GENE 4 2947 - 3195 145 82 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00865 NR:ns ## KEGG: ACICU_00865 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 82 1 82 82 102 100.0 4e-21 MSLALFMSIMALIAYFKGKLGFEYIFSLTVGYALIFFILKNAALPLFPPLTEKSSDANAM ARTTIAIVYILALIALTISYSL >gi|333032587|gb|GL891839.1| GENE 5 3530 - 3814 211 94 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00866 NR:ns ## KEGG: ACICU_00866 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 94 1 94 94 187 100.0 9e-47 MKFYKTILVLGLVVGDYSVSGCDLRTQQEFEKICLSGGHTQASCDCIYQRLEQVYSPQLM QRLEHVSLQSPALPQDFAPTFFSVMRRCDKNDMG >gi|333032587|gb|GL891839.1| GENE 6 4461 - 5807 1127 448 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00869 NR:ns ## KEGG: ACICU_00869 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 448 1 448 448 888 100.0 0 MNKYLLWGCIGLGSVSNAYAELPQEFGKLELKLNTRYWNDEGTAHPTLANPSPSSSEYEQ SALGLELNYQSPYMWDWLGVDGSLYAVTKLFDSGKPSAQLLEVENNGKLDQNFATFGQLY IKAKLGDQGEIKLGRQLQDSLLLKSTNNRAVPDTFSGASGQFQLNDQLQTYIAYYDRWKP RSMDSFEKLVTENDERIDYVGLLGAKYQYKNWSVNAEYLNSKDYLKKYGAIAQYKLPMHG LVWTFNTGAFFSRDDGKLFKCGAETELDCVKGQDINNRGNGYFVDVNVAKNNIEGGIAIS KFDGFWIEDNFAVHSDRNSVLTQDHGTNPFPTSATIGPDFTNNDETAVALRLKYNWKDYV KGLKTEAKYIYGFGAHQSNISSDIEGKERYFDFTVSYALPWVKNLDVRYSFLHYESKFEN ANLGEKINGMSRKYWDQHRVFINYRYTF >gi|333032587|gb|GL891839.1| GENE 7 5885 - 7270 1501 461 aa, chain - ## HITS:1 COG:AGpA571 KEGG:ns NR:ns ## COG: AGpA571 COG0477 # Protein_GI_number: 16119622 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 461 19 461 461 514 60.0 1e-145 MTNLADVEQISHHQKNAEIIARLERLPVTGRLQFMRITIGIATFFDAYTVLAIAFALPQL ITEWHLTPAYVGAIIAAGYVGQLVGAIFFGSLAEKVGRLKVLSFTILLFVAMDISCLFAW SGMSLLIFRFLQGVGTGGEVPVASAYINEFIGAEKRGKFFLLYEVLFPLGLMFAGMAAFF LMPIYGWKVMFIVGLIPSLLVIPLRFFLPESPRWLASKGRFKEADQVVKSFEDGAIKSGK TLAEPVVKEINPQGMAKTDWRELFRGIYRKRTFTLWGMWFCVYMVNNAMVTWLPSLYKQH FGLSLQTSLGYGWITSGVGVIASIICALMIDKVGRRPWYSAAFFLAIIPLMSLSVLGAKS AMQVVILATLSYAILQTISFSLYLYAAELYPTRLRAMGIGFSTAWLRAGSAIGPVMVGLV VGGYGIQYVFSVLAVVALIGGLVTFLFAIETKGQVLEKLSP >gi|333032587|gb|GL891839.1| GENE 8 7443 - 8387 1212 314 aa, chain - ## HITS:1 COG:AGpA569 KEGG:ns NR:ns ## COG: AGpA569 COG0329 # Protein_GI_number: 16119621 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 314 1 312 313 414 66.0 1e-115 MSLDLRGLTPAPVTPFTRDGQVDHDAIQRLGSWLGSIDGVKGLVVLGHAGEGTFLSQKEQ MQVIESFVKSVDDKIPVIAGITLEGTSVAAEEAKRAVSAGASAGLIYPSHGWLRFGYQKG APQDRYKAIYEESGLPSILFQYPDATKATYDLDTLLDISAQPGVFAMKNGVRNMRRWDVE IPIIRRERPDLQVLTCHDEYLLHTMFDVDGALVGYGNIAPELLIEMIKAGKAKDYAKARA IHDQLLPVTRNVYHRGSHMEGTVALKHALVARGILDHATVRSPLLPLADGAEQEIHDAMR QAGIGKVDLTQAVA >gi|333032587|gb|GL891839.1| GENE 9 8575 - 9465 791 296 aa, chain + ## HITS:1 COG:mlr6097 KEGG:ns NR:ns ## COG: mlr6097 COG0583 # Protein_GI_number: 13475091 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 7 293 15 299 316 114 28.0 3e-25 MNYELWKIFLDAVELGSLSKVAMLHNTNQPQISRQMNELEAQCGGRLFNRTGRGVELTDL GQHLLPKIRSWLNVTDQLNNEILHSTDTPIGTVRIASLPSTAHPLLSTLYKVLQQKYPLI KLSVREGQGVHLEKWLEDGSVDLAILYRFNPTPKQGDIYLIQADTYLVGSEGDALTQASE VDFKEISQLPLVTFCRPSNWRNFLDHMAYENGVELNIVFEADSISLQTHLVSESRMYTML GPQALKKASQYTSIQAAKIINPALKRYISLSISKHGYLTPACKAVMEEIRNLADLL >gi|333032587|gb|GL891839.1| GENE 10 9480 - 9755 206 91 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2875 NR:ns ## KEGG: ABAYE2875 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 91 12 102 102 169 97.0 2e-41 MSLYNFSVFLGGLLFVSIASAGYKSNAHRDFYSKCVAAGHSRATCLCIYHRLERQYSPKL MHKLGKLSLQSPEVPRDFVKTMLRTMQQCQS >gi|333032587|gb|GL891839.1| GENE 11 10076 - 10783 653 235 aa, chain + ## HITS:1 COG:RSc0238 KEGG:ns NR:ns ## COG: RSc0238 COG3619 # Protein_GI_number: 17544957 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 22 231 26 236 236 120 38.0 2e-27 MPETSIQQETQSTWVICRDPVLLTMVGGAIDTIGFIALFGFFTAHVTGNLVLAGAALVKG GAGLWIKLAAIPLFIVTVVITKLLIDRSQTKHKTLSYLFLFEAIFLFAFMAAGLYFEPFK NADSITVAITGGLGLIALAIRNTSSKTLIKNISPSTMMTGNTTQLGIDIANLLKNNNAAN RASLLKSASIVIGFVIGALMGAVLYVYFDFWSVAPFILPILYFSYLASQQKFKQA >gi|333032587|gb|GL891839.1| GENE 12 10907 - 12820 1620 637 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2873 NR:ns ## KEGG: ABAYE2873 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 637 23 659 659 1273 97.0 0 MTKSGHYLVLTIMGLLSGCQVIHLKESNLSSALKSKNESILTDNTLSHQTQNLLYLVKED EKTCLQNFDDCLNKVQSLSENSSREERYAALSEIYLAKALDVGRSSQCNVTLKSNSCVEQ ELALFDKSLRYSYVYLFDSEEPPFDRVFDHRQNQVRIFYNVALSKLMTTYFNHLNTLHFP PILKADGHEYHVNFDHAVDVQYIEVDTFRSSYNMNFSGFNTVNRKDGLGAEFIVGRKEHD VNHGFILDPDAFYAYQSNPNIHLPRFFPVTAIAYPKQKATADQVIDGAELEIAMFDPYRQ DRVKVEGVDYPLTANYSAPYGLWLSKYNLGAAGYWSLINKEANLIMPHLYMLEPFNPNKK IIVFIHGLASSPEAWVSLTNDIMGDAELRQNYQVWQVFYSTNMPIFESRFQIYSLLNQAF QNVAKDSYAAHDAVLVGHSMGGVISRLLVSDADVSDLAMQKMNEAQLKRLKENPVIRERF QFKDLPYFKRVVFVSAPHHGTDYADRWFTQIARRIIRLPADFFIAVEMRDEKNTKLRKGL IENGASNLSRSSNFMQLTQAIQPSSNVVYHSIMGNINGTTDKSKMSDGIVPYQSSHLGGE QSELIIKGGHSIQTSPEAILELRRILRLHLKQSPPSK >gi|333032587|gb|GL891839.1| GENE 13 12875 - 14209 1096 444 aa, chain - ## HITS:1 COG:YPO2306 KEGG:ns NR:ns ## COG: YPO2306 COG0531 # Protein_GI_number: 16122530 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Yersinia pestis # 5 427 4 426 463 428 57.0 1e-119 MSAAKIGLLSLTALVFSSMVGSGVFSLPQNMAQVANGSALLVAWLITGVGIIFLALSLLH LTRQRPDLDGGIYNYAREGFGDLIGFCSAWGYWLCTTIGIVGYVVIAFSGVGMFTDSKDH VIFGEGNTLYSLIGSSIFVWLVHWLVSRGIKEAAIVNLLATIAKIIPMVVFIFFTFIAFK FDLFKLNLNDFSLKVPLWQQVKDLMLITLWVFTGIEGAVVLSSRAKNRHDIGKATILGVL LALSFYVMVTVLAYGVVSREALAGMHNPSMATILQQLIGLPGTIIITIGLIISVSSSYLS WTLFATEIPYLAAKNGAFPKLFLKNNQNNVPISSLWLTTIVVQGSLIAVYFFNKNYTQLL LISSVMILLPYFLVSAFYLKESIRHKRTPHIAIASVASIYALWLLYAAGLDLLLLSGVLY LVGLVIFSISYFEHKKSLKQNQLN >gi|333032587|gb|GL891839.1| GENE 14 14215 - 15093 1118 292 aa, chain - ## HITS:1 COG:AGc4290 KEGG:ns NR:ns ## COG: AGc4290 COG2040 # Protein_GI_number: 15889636 # Func_class: E Amino acid transport and metabolism # Function: Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 283 6 294 306 268 46.0 1e-71 MKILDGGLGRELARRGAPFRQPEWSALALIEAPETVKEVHLDFINAGAEVITTNNYAVVP FHIGQERFETDGVRLIKVAIEQAKNAVKESGKNVKIAGCLPPLFGSYRADLFQPGQAKNL AEPIINTLAPEVDFWLAETQSCLKEVETVHALLPQDGKDYWVSFTLQDEIKQEQALLRSG ENMQQVADFIKQSNAKAVLFNCCQPEVILQAINEIKGLIPESVQIGAYANAFPPQDESAT ANDGLDEIRKDLDAPTYLAFAKQWQQAGASLVGGCCGIGPEHIAELSQFFKE >gi|333032587|gb|GL891839.1| GENE 15 15310 - 15684 273 124 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2870 NR:ns ## KEGG: ABAYE2870 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 124 46 169 169 186 95.0 2e-46 MWMIGGTAIYVSSAVLFVITAYAFKLGKYQKLCAVLNVLMSAAALYFSMAHLFFSPIQFF IFLPALFFVVLAFTQVSKVRSLSKVLILISLLIWSGVHFTQLEQLKAYYQTQHTGESWQQ YGAL >gi|333032587|gb|GL891839.1| GENE 16 15872 - 17512 1858 546 aa, chain - ## HITS:1 COG:yojH KEGG:ns NR:ns ## COG: yojH COG0579 # Protein_GI_number: 16130147 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Escherichia coli K12 # 35 532 26 526 548 610 59.0 1e-174 MKKFLKYLLVLIILILIAGIVFLFRPIASKQVQTAKDEPVVDAVLVGGGIMSATLGTYFT ELEPNWQIRMFERLDQVAQESSNGFNNAGTGHSGFMEMNYTEEKNGKMEIAKAEKVASQF EVAKQFWSYQVKQGVLAEPKTFINPVPHIAFVWGDNVKFLEKRYAAMIQSPLFKGMKFTE DPAVIKQWAPLVMTDRDPTQKVAATRMEVGSDVNYGSITKQLVNHLNQNPNFKLQTSTEV TGISQNDDKTWTVSFKNLKTGKTDHVKTRFVFIGAGGAAVKLLQLTGLPEAKQYAGFPVG GEFLITDNPAITAQHTAKVYGRAELGAPPMSVPHIDTRYIDGKKYVLFGPFATYSNKFLK NGSQLDLLASTNKSNVLPMTTVGLENLDLVKYLVSQVMMSDEDRLNELRKYYPDAKAEDW RLSQGGQRVQIIKKEPGKPATLQFGTEIFASKDGAVTALLGASPGASTSPYIMLNLLEKA FPQQTEGKWNQKLHEIVVSYKQDLSKDPVLLDKVRQYTSSTLGLNYTSPFKAANDETAAA PVAKAN >gi|333032587|gb|GL891839.1| GENE 17 18023 - 19681 1754 552 aa, chain - ## HITS:1 COG:PA5372 KEGG:ns NR:ns ## COG: PA5372 COG2303 # Protein_GI_number: 15600565 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Pseudomonas aeruginosa # 4 551 3 549 561 937 79.0 0 MNIKEYDYIIIGAGSAGNVLAARLTEDKDTTVLLLEAGGPDYRLDFRTQMPAALAYPLQG RRYNWAYLTDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLEQWATHKGLENWT YADCLPYYKKAETRDIGGNDYHGDSGPVSVATPKNGNNVLFHAMVEAGVQAGYPRTDDLN GYQQEGFGPMDRTVTPKGRRSSTARGYLDMAKGRPNLTILTHATTNKILFNQKQAIGVEY IIGADQNNLQRALVKREVLLCAGAIASPQILQRSGVGQSTFLKSMDIDVVHDLPGVGENL QDHLEMYLQYKCKQPVSLYPALKWYNQPAIGAEWLFNGTGIGASNQFEAGGFIRSSDEFK WPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRSPSRGRIKLKSKDPFAHPSILFNYMS TEQDWREFRDAIRITREIMHQPALDPYRGDEISPGKHLQTDAELDDFVRNHAETAYHPSC SCKMGEDEMAVVDGQGRVHGMNGLRVVDASIMPLIITGNLNATTIMIAEKIADQIRGREA LPRSTAPFYVAS >gi|333032587|gb|GL891839.1| GENE 18 19777 - 21249 1629 490 aa, chain - ## HITS:1 COG:PA5373 KEGG:ns NR:ns ## COG: PA5373 COG1012 # Protein_GI_number: 15600566 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 1 490 1 490 490 784 78.0 0 MSDVQVHQLYIHGRYVEATSGKTFNSINPANGEIIATLQQASEQDIEAAVKSAQQGQKIW AAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLA TAIQGEQVPLRESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSET TPLTALKLAEIYTEAGLPDGVFNVVQGAGREIGQWLTEHPVIEKISFTGGVETGKKVMAS AAGSTLKEVTMELGGKSPLIICEDADLNRAADIAVMANFFSSGQVCTNGTRVFVPKSRLA DFEKAVVERVQRIRIGDPMAEDTNFGPLTSFPHMEKVLSFIESGKQQGAKVLIGGGRATE GELAKGAYVLPTVFSDCTDQMAIVQEEIFGPVMSILSYETEEEVIQRANDTTFGLAAGVV TQDISRAHRIIHQIEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLGHYTRIKSIQ VELGDYQSIF >gi|333032587|gb|GL891839.1| GENE 19 21242 - 21865 377 207 aa, chain - ## HITS:1 COG:YPO1167 KEGG:ns NR:ns ## COG: YPO1167 COG1309 # Protein_GI_number: 16121463 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 5 199 3 197 198 161 42.0 1e-39 MTKRRVKPEHVRREEIMNAALDVIYEVGLSNTTIAQIAKKAELSTGIVSHYFGDKQGLIN TCMQEMLNVLRRKTEQYRAEADSHPESQIKAIIDSNFDISQVNEKAMRVWLDFWSASMHV PDLSRLQKINDQRLYSNLKFYFLKLMDEQQASVAARGLAALIDGLWLRGSLSRHNEFDSE LARSIAYDYVKTQLQFANKPLQERQNE >gi|333032587|gb|GL891839.1| GENE 20 22131 - 23753 1248 540 aa, chain + ## HITS:1 COG:PA5375 KEGG:ns NR:ns ## COG: PA5375 COG1292 # Protein_GI_number: 15600568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 19 508 1 494 516 510 54.0 1e-144 MVLKSDGYSSDHIRLNRFVFWSSAVSIGIFGLLFVLFPEKSQFWLTYVQEQVNHFFGWYY MLVIVLCLGFVAWLAFSRVGQIPLGKDHDKPEFGYLAWTSMLFSAGIGIALLYYGVAEPV DHFLRPPEGEAGTIQAARNAMTYSFLHWGIHGWVLYALLGVTLGYFAFRQDLPLALRSAL YPIFGERVHGLVGDFVDGFGILATVISLVTNLGIGALVLVSGICYLIPEIPDNSATLITA VLIMMFVATVTTVVGIEKGLAWLSRINLRLLYALLLFVFLTGPTNHLLNGLVQNTGDYLN NFMGKSFDMYLYNQKASGWLGSWTVFYWAWWIAWAPFVGMFIARISKGRTIREVVLGVCL IPLGFTLAWISIFGNTAIHLILNQKQKVLGDMVLSDPALSLFKLLEYLPFNPYIAGIVVV ICFVLFLTPVGSGTLMIANLSSKGGTSDSDSPIWLRIFWSVVITIVSIGLLLAGSFNSMQ SAVVLCGLPFSVIILLYMFGLAKALKQDDFDPNVAKKQLAISQDISIPSNCDQNKVTEVL >gi|333032587|gb|GL891839.1| GENE 21 23871 - 25937 1425 688 aa, chain + ## HITS:1 COG:ECs0360 KEGG:ns NR:ns ## COG: ECs0360 COG1292 # Protein_GI_number: 15829614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Escherichia coli O157:H7 # 11 685 3 676 677 925 67.0 0 MATDNPRAVDDLTLSKSKKDPLNRVVFYISALIILIFSLVTFLFNDFANRTINTVLAWVT STFGWYYLLAATLYMVFVIFIACSRYGEIKLGPKHSKPEFSLLSWSAMLFSAGIGIDLMF FSVAEPLSHYMQPPVGVGQTYEAARQSMVWTLFHYGLTGWCMYALIGMALGYFSYRYNLP LTIRSALYPIFGNRINGAIGHSVDTAAVIGTIFGIATTCGIGVVQLNYGLHVLLGLPENI WMQFALIAIAVGISIISVTSGVNKGLRILSEINIYVSIGLLLFILFLGNTEFLLNALVQN IGDYLTRFPTLALQSFAFEQPKDWMSSWTLFFWAWWIAWSPFVGLFLARISRGRTIREFV CGTLIIPLLFTLTWLSIFGNSALHSVIFEGNQTLAATVLSNPAHGFYDLLAQYPGFTFIA SVATVTGLLFYVTSADSGALVLGNFTTKLTHIDNDAPRWLSVFWAIAIGLLTLAMLMTNG ITALQNATIIMGLPFSFVMFLVMAGLYKSLRLEDYRHASRSMNAAPVVGNVDILNWKQRL TRVMHHPGTTETRRMLDTVCKPAVQAVADELIKQGMNVDVQQTPLEDEEALYHLDITIHL EEEQNFVYQIWPVRYSAPNFSQRVKRGKQFYYRLETYLYEGSQDNDLVGYSKEQVINDIL DKYERHMTFLHINRISPGNRPLFPDPQA >gi|333032587|gb|GL891839.1| GENE 22 25949 - 26563 492 204 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002679 NR:ns ## KEGG: ABBFA_002679 # Name: not_defined # Def: MarC family integral membrane family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 204 1 204 204 351 100.0 9e-96 MVSPYLHSFALFFSLLNPFLMSIYMIGLIRHSETKVFNKALIQGSLIAYIVFMLFAWGGE AIFSKYLNVRFEAFQIFGGLIFLVIGYRYVFQGADTIGEMRGAPEHLAGTIAMPFMIGPG TISAAVVTGIEMSIGAAALVIGFTMFLTCSILILMKFSHDHLRYKHAKYIDRYFDIVGRL SALLIGTIAVDMIINGVTGLIHKV Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:41:08 2011 Seq name: gi|333032586|gb|GL891840.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld36, whole genome shotgun sequence Length of sequence - 46189 bp Number of predicted genes - 47, with homology - 47 Number of transcription units - 22, operones - 10 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 5 - 64 6.0 1 1 Tu 1 . + CDS 111 - 452 320 ## ABSDF2881 hypothetical protein - Term 441 - 494 4.1 2 2 Tu 1 . - CDS 498 - 1040 550 ## COG0431 Predicted flavoprotein - Prom 1092 - 1151 7.4 - Term 1140 - 1168 1.0 3 3 Op 1 7/0.000 - CDS 1174 - 1656 318 ## PROTEIN SUPPORTED gi|90022209|ref|YP_528036.1| ribosomal protein S2 4 3 Op 2 16/0.000 - CDS 1658 - 2188 463 ## COG0597 Lipoprotein signal peptidase 5 3 Op 3 16/0.000 - CDS 2181 - 5018 3183 ## COG0060 Isoleucyl-tRNA synthetase 6 3 Op 4 . - CDS 5080 - 6081 377 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 - Prom 6210 - 6269 8.4 + Prom 6186 - 6245 8.9 7 4 Op 1 . + CDS 6290 - 7423 850 ## COG1275 Tellurite resistance protein and related permeases + Term 7433 - 7466 4.4 + Prom 7425 - 7484 3.7 8 4 Op 2 . + CDS 7504 - 8070 511 ## COG0775 Nucleoside phosphorylase + Term 8076 - 8107 3.4 - Term 8064 - 8095 3.4 9 5 Tu 1 . - CDS 8105 - 8725 617 ## COG1309 Transcriptional regulator - Prom 8807 - 8866 4.6 + Prom 8516 - 8575 4.5 10 6 Tu 1 . + CDS 8765 - 8917 56 ## gi|332855718|ref|ZP_08436014.1| conserved domain protein + Term 9002 - 9053 -0.9 - Term 8897 - 8936 3.2 11 7 Op 1 24/0.000 - CDS 8986 - 9786 305 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 12 7 Op 2 8/0.000 - CDS 9800 - 10597 783 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 13 7 Op 3 5/0.125 - CDS 10594 - 11769 1422 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 14 7 Op 4 2/0.125 - CDS 11796 - 12779 928 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Term 12796 - 12839 -0.8 15 7 Op 5 . - CDS 12851 - 13819 901 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Prom 13891 - 13950 10.0 - Term 14055 - 14102 4.1 16 8 Tu 1 . - CDS 14153 - 15508 1329 ## COG0548 Acetylglutamate kinase - Prom 15539 - 15598 6.7 - Term 15579 - 15611 2.5 17 9 Tu 1 . - CDS 15629 - 15949 293 ## ABBFA_003479 hypothetical protein - Prom 16057 - 16116 10.9 - Term 16094 - 16148 13.2 18 10 Tu 1 . - CDS 16173 - 16583 576 ## ABAYE3837 hypothetical protein - Prom 16700 - 16759 9.0 19 11 Op 1 2/0.125 - CDS 16801 - 17547 965 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 20 11 Op 2 3/0.125 - CDS 17613 - 18311 779 ## COG0546 Predicted phosphatases 21 11 Op 3 . - CDS 18311 - 19024 869 ## COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase - Prom 19125 - 19184 4.8 + Prom 19091 - 19150 5.3 22 12 Tu 1 . + CDS 19204 - 19821 674 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 19833 - 19880 5.3 - Term 19828 - 19858 2.3 23 13 Op 1 7/0.000 - CDS 19899 - 20546 535 ## COG1309 Transcriptional regulator - Prom 20572 - 20631 2.9 24 13 Op 2 . - CDS 20683 - 21321 728 ## COG1309 Transcriptional regulator - Prom 21344 - 21403 7.0 + Prom 21375 - 21434 6.8 25 14 Op 1 2/0.125 + CDS 21494 - 22519 754 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 26 14 Op 2 . + CDS 22544 - 23692 1275 ## COG3239 Fatty acid desaturase + Term 23709 - 23741 2.0 + Prom 23714 - 23773 4.5 27 15 Tu 1 . + CDS 23851 - 24567 1029 ## COG0689 RNase PH + Term 24587 - 24614 0.1 + Prom 24711 - 24770 5.0 28 16 Tu 1 . + CDS 24857 - 27025 2243 ## COG3511 Phospholipase C + Prom 27340 - 27399 7.6 29 17 Tu 1 . + CDS 27493 - 27660 263 ## AB57_0086 hypothetical protein 30 18 Tu 1 . - CDS 27657 - 28502 472 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 - Prom 28534 - 28593 4.6 + Prom 28493 - 28552 4.2 31 19 Op 1 . + CDS 28674 - 29243 465 ## COG3023 Negative regulator of beta-lactamase expression 32 19 Op 2 . + CDS 29325 - 30866 1056 ## PROTEIN SUPPORTED gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 + Term 30876 - 30905 -0.3 - Term 30849 - 30908 9.1 33 20 Op 1 . - CDS 30912 - 31607 778 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Term 31613 - 31648 4.3 34 20 Op 2 . - CDS 31657 - 32379 885 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 32476 - 32535 13.5 - Term 32515 - 32557 8.6 35 21 Op 1 4/0.125 - CDS 32571 - 34754 2336 ## COG0489 ATPases involved in chromosome partitioning 36 21 Op 2 6/0.125 - CDS 34774 - 35202 417 ## COG0394 Protein-tyrosine-phosphatase 37 21 Op 3 . - CDS 35208 - 36308 1165 ## COG1596 Periplasmic protein involved in polysaccharide export - Prom 36499 - 36558 7.5 + Prom 36528 - 36587 5.9 38 22 Op 1 . + CDS 36664 - 37938 1248 ## COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase 39 22 Op 2 7/0.000 + CDS 37952 - 39148 1176 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 40 22 Op 3 . + CDS 39148 - 40296 1168 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 41 22 Op 4 1/0.250 + CDS 40302 - 41438 1017 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 42 22 Op 5 1/0.250 + CDS 41428 - 42522 1106 ## COG2089 Sialic acid synthase 43 22 Op 6 . + CDS 42523 - 43164 318 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 44 22 Op 7 . + CDS 43157 - 44212 1093 ## COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 45 22 Op 8 . + CDS 44212 - 44901 535 ## COG1083 CMP-N-acetylneuraminic acid synthetase 46 22 Op 9 . + CDS 44913 - 45653 450 ## COG0300 Short-chain dehydrogenases of various substrate specificities 47 22 Op 10 . + CDS 45656 - 46187 300 ## Dfer_1894 oxidoreductase domain-containing protein Predicted protein(s) >gi|333032586|gb|GL891840.1| GENE 1 111 - 452 320 113 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2881 NR:ns ## KEGG: ABSDF2881 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 113 4 116 116 205 97.0 4e-52 MRKFFIFGVPVKINSFSPIPEDDEELSLPELIYWASLGDLEQVKQLLIDGEDPNQTDDEG YSALQAAAENDHLEIVKLLVEKGAHVTYKSEYTALQLAEMAGNTDIVNYLKSL >gi|333032586|gb|GL891840.1| GENE 2 498 - 1040 550 180 aa, chain - ## HITS:1 COG:Cgl2851 KEGG:ns NR:ns ## COG: Cgl2851 COG0431 # Protein_GI_number: 19554101 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Corynebacterium glutamicum # 1 161 1 162 181 123 36.0 2e-28 MLVYIIVGSVREGRTAIKIANWLETTIPSFNLKDFQTEVIDLKEWNLPLFSGSHPPATGI YDQPKQQEWADKIAQADAFIFISPEYNHGYSPALKNALDYVGKEWSGKPAAFIGYGSTNG SRSISQIRQVTSSLSIVDPNAVIEIRDIFKRNKDEKFEANEFEVKGLQSIVEKLQKYHLS >gi|333032586|gb|GL891840.1| GENE 3 1174 - 1656 318 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90022209|ref|YP_528036.1| ribosomal protein S2 [Saccharophagus degradans 2-40] # 8 152 3 148 151 127 41 2e-28 MTEIIQPNEEIRITDGSKVDLHFSVAIENGVEIDNTRSREEPVSLTIGDGNLLPGFEKAL LGLRAGDRRTVHLPPEDAFGPWNPENIQTFDTVKFEQRPIPGHMIEFEDKAKATLFGVVK SVNDDITEIDFNHPLAGKNITFEVEIFKVTPAGQQGIKIM >gi|333032586|gb|GL891840.1| GENE 4 1658 - 2188 463 176 aa, chain - ## HITS:1 COG:RSc2459 KEGG:ns NR:ns ## COG: RSc2459 COG0597 # Protein_GI_number: 17547178 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Ralstonia solanacearum # 20 162 25 166 173 139 50.0 2e-33 MPNSQAKKGLFQFYPHNLIWLGLSVLAIVLDQWTKWIASTHLNYADPVPVLPFLNWTLLH NYGAAFSFLSDAGGWQRYFFTSLAGLVSILFVFWLLRMPKKMVVLPVAIALILGGALGNL IDRITLGYVVDFIHVYYQNHHFPAFNIADSAITLGTILLLIDTFFLEKQRPKNSDA >gi|333032586|gb|GL891840.1| GENE 5 2181 - 5018 3183 945 aa, chain - ## HITS:1 COG:VC0682 KEGG:ns NR:ns ## COG: VC0682 COG0060 # Protein_GI_number: 15640701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Vibrio cholerae # 12 945 3 949 949 1117 56.0 0 MSDKQTTENAVDYKATLNLPDTQFAMKANLAVREVKWLEEWYTDNIYQQIRASRIGKKKY ILHDGPPYANGTIHLGHAVNKVLKDIIVKSRTLAGFDAPYVPGWDCHGLPIELKVEEKVG KVGEKVDAATFRKHCREYALKQIDLQRTDFKRLGILGDWDNPYLTMNYKQEADIVRALGL IQKNGHIQPGLKPVNWCMDCGSALAEAEVEYEDKKSDAIDVGFGVVDLKDLSARVNVDVQ DPTDIVIWTTTPWTLPANQAVALHAEIEYQLVQVTTERGKQNFILAKDLVASAIERYKLE NPVVLADFTGSALENLTLQHPLLTDRQVPVILGEHVIATSGTGAVHTAPGHGADDYKVGL QYNLKVENPVGGNGVYLPTAPIFAGEHIYKANPKIIEALGAVGRLWAHQPIKHSYPHCWR HKTPIIFRATPQWFISMDQKGLRDGALNAIENDIEFVPNWGKNRIESMIEGRPDWCISRQ RTWGVPIPFFVHKDTNELHPRTPELIEEVAKLIEKEGIDAWFNRDAKDFIGEDAEQYNAV RDTLDVWFDSGTTHYAVLEQREELESPADLYLEGSDQHRGWFQSSLLTSMAIHNRAPYKA LLTHGFTVDENGRKLSKSLGNYIPLEEIIKQLGADGLRLYVASSDYRYEIAASKEIFSRV SDSYRRIRNTLRFLLANLNGFKPSTDALAVDDLIALDQYILQRANEVQQTIIAAYEEMNF HVVCSALTSFCINDLGGFYLDIIKDRQYTTKADSQARRSAQTALYHIVQAFVRWMSPILS FTAQEAWPLIPEQTEKYVFTAEWYDLPVSSKANLLSEADWQTLISVKSAVNKQIEAARNA KLVGSNLSAKVELWANESLQTVLNQLADELRFVLITSQVVVHPFAEQGEATEMEGLRVQV SAAEGEKCARCWHVLPDVNTHADHPGLCGRCIVNVTGRGEVRKYA >gi|333032586|gb|GL891840.1| GENE 6 5080 - 6081 377 333 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 327 1 314 317 149 30 2e-35 MKLLRLNALSPNFQLPQTAVTIGNFDGVHLGHQAMIAQLKKIAAAQGLKTLVMIFEPQPL EFFKGYDAPPRINSLREKVEYLAELGVDYIAVAKFDQHFRSMSASEFADLLKDKLNAQAL VLGDDFHFGKDRQGNSEFLKNYGFQVTNLHTIELEGERVSSTRIRQVLQVGNLALAAKLL GRPYSITGRVQYGDQIGRTLDFPTINVRLNRHKPCLNGIYGVEVICETTSLTQKVLQDNP EKPGIAGYHENSLYGAGHVGTRPAIQQEHPEWRLEVHFPDVSANLYGLFMRVTFLHYLHG ELNYPSLEALKAGIDNDVQQLRQYRNDTTQFPF >gi|333032586|gb|GL891840.1| GENE 7 6290 - 7423 850 377 aa, chain + ## HITS:1 COG:PH0884 KEGG:ns NR:ns ## COG: PH0884 COG1275 # Protein_GI_number: 14590741 # Func_class: P Inorganic ion transport and metabolism # Function: Tellurite resistance protein and related permeases # Organism: Pyrococcus horikoshii # 15 360 5 329 330 134 29.0 4e-31 MKRPFYQLNQSKDVIRHFTPNWFTATMGTGVVSMILIQLPFAKSFLFMLATLLWQFNIVL FSVFSVLYLLRWFLFPHEAKQIFNHPNMSLFLGAIPMGLATILNGFLSFGIGLYGEVAVH IAQALWYIDVFLALAIAWIVPFCMFSRQNHQLHTMTAIWLLPVVACEVAASSAGMLVAHL PADVHSFHLLLAGYVLWGISVLPAFAILTILMLRMALHQLPEKEVAISSWLSLGPIGTGA LGLLLLGEQAQRVFVNVGFPELAHVFKALGVVGSLVLLGFGLWWLGLAILTTLRHAKTGI PFNLGWWGLTFPFGVFILALFNLGHQIEVVFLQYVAVAFSILLLVMWSVVMKKTLAGAYS GKLFFSPCLVALQQRMQ >gi|333032586|gb|GL891840.1| GENE 8 7504 - 8070 511 188 aa, chain + ## HITS:1 COG:BMEII0888 KEGG:ns NR:ns ## COG: BMEII0888 COG0775 # Protein_GI_number: 17989233 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Brucella melitensis # 52 180 60 190 209 85 35.0 7e-17 MNTDTALIMALPNESKGLFEQAGIEVHYSGIGKINAAFKAFEVIQKTGCKTLINLGTAGS SSFNRHDLVEIKTFVQRDMDVSPLGFEVGVTPLDDHLAAEIHLQTHFADLPKGICGTGDS FETGQPKVACDVVDMEGYALAKVCHKLGVRLISVKYITDGADDTAHLDWEENLLLGAQKL LALYQNHF >gi|333032586|gb|GL891840.1| GENE 9 8105 - 8725 617 206 aa, chain - ## HITS:1 COG:ECs1259 KEGG:ns NR:ns ## COG: ECs1259 COG1309 # Protein_GI_number: 15830513 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 10 206 17 212 212 178 44.0 6e-45 MQQMEQKKSTQKRNQLLAAALDVFSLYGFSGASLDEIAQLADMHKSNIFYYYENKESLYV EVLTTVLQKWLAPLQTLEAELEPAEALSHYLIQKIELSRSQPKASRLFALEIIQGAPHIL PILKGPLKKLFKRKAKVIQTWQEQGKISPDIDPELLILNIWGLTQNYADFATQMEMVTGK TLRNRSMFQRSIEHTVHMMLYGVLPR >gi|333032586|gb|GL891840.1| GENE 10 8765 - 8917 56 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332855718|ref|ZP_08436014.1| ## NR: gi|332855718|ref|ZP_08436014.1| conserved domain protein [Acinetobacter baumannii 6013150] conserved domain protein [Acinetobacter baumannii 6013150] # 1 50 1 50 50 81 100.0 2e-14 MICAQVSHFFSEKTDSYLSNRYTIVQKIERFTSLLLFLKIFFNLRPKKEQ >gi|333032586|gb|GL891840.1| GENE 11 8986 - 9786 305 266 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 32 236 2 219 245 122 36 5e-27 MTNLNLNINQNDVELIPENHPESQEPVVGAEILIEQLYKFYGEVKVLEDLNLHIQPGEFL AIVGRSGCGKSTLLRLIAQLEKASFGEIKFKSARHLREGITNDDIRVMFQDPRLLPWRNI LQNVQLGLPKSQHALAEELLEKVGLKEKAGQWPSQLSGGQRQRTALARALSHTPRILLLD EPLGALDALTRLEMQSLIERLWKEQGFTAILVTHDVSEAVQLADRIILLDKGQIAQSFQV NLPRPRKKSITFAQLEQQVLDAVLAT >gi|333032586|gb|GL891840.1| GENE 12 9800 - 10597 783 265 aa, chain - ## HITS:1 COG:YPO3626 KEGG:ns NR:ns ## COG: YPO3626 COG0600 # Protein_GI_number: 16123768 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Yersinia pestis # 13 265 7 259 265 308 64.0 6e-84 MSKDINIVSRGTKQVGQRLLPWIFPIVLLVVWQIASSSGLLENRILPAPTAVVSAFWHLL ISGELWQHVKVSAGRALLGLFIGGGLGLLLGLLNGSSRFASTLLDTTLQMIRNIPALALI PLVILWFGIDETAKLFLVAVGVFFPIYINTYHGIRSVDPQLIEMGKSYGLSRWQLYKEII LPGAMPSILVGLRFALGLVWVLLIVAETISAQAGIGYMTMNAREFLQTDVVLVGILLYAL LGKLADVLAQLLERYLLRWHAGYQK >gi|333032586|gb|GL891840.1| GENE 13 10594 - 11769 1422 391 aa, chain - ## HITS:1 COG:RSc1339 KEGG:ns NR:ns ## COG: RSc1339 COG2141 # Protein_GI_number: 17546058 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Ralstonia solanacearum # 1 378 1 382 387 525 67.0 1e-149 MKIFWFIPTHGDSRYLGTSKGARQVDHAYMKQIAVAVDNLGYEGVLIPTGRSCEDPWITA ASLIDATQHLKFLVALRPGVTTPALAARMAATFDRLSNGRVLLNLVTGGDEAELRGDGLY EDHSTRYQTANEYVKIWREILTRSHTGETFTFHGVRLQVDDAKLLYPPVQKPYPPLWFGG SSDVAVELAAEQVDTYLTWGEPPAAVKEKIEHVRAKAEAKGRKLTYGIRLHVIVRETNEQ AWAAANELIQYLDDATIAAAQKKFAQMDSVGQQRMAALHGGNRDKLEVSPNLWAGIGLVR GGAGTALVGDPETVAARIQEYADLGIDTFIFSGYPHLEESIRFAELVFPLLPIETRAKLA QPNLTGPFGEIIANNYVPDEKKQNSSVKEPA >gi|333032586|gb|GL891840.1| GENE 14 11796 - 12779 928 327 aa, chain - ## HITS:1 COG:RSc1338 KEGG:ns NR:ns ## COG: RSc1338 COG0715 # Protein_GI_number: 17546057 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Ralstonia solanacearum # 42 324 43 324 336 292 54.0 5e-79 MQHLSLFNKSQWTQLVKRFSAVAVLGFTIAAPAWAIDPTVKELRIGFQKSSINFAIAKQQ KLFEQEFPNAKITWNEFPAGPQILEALAVGSLDVGVTGDTPPVYAQAAGKPLYYIAYEAA KPLASAILVPKNSQLKQLKDLKGKRIALQKGSSSHYLLVQAVRKAGLKWSDITPIWLTPA DARAAFQKGAVDAWAIWDPYYASAQLEDQARVLAPGKGLSPNYTFYLAAPNFVKQYPKAV PGLIKQINQADKWVQSHQAETASAIGQSTGLKPATSDLFIKRRPRPSSAAPLNSKVIAEQ QQLADIFTQQGIIPKPISIKQAVWGAK >gi|333032586|gb|GL891840.1| GENE 15 12851 - 13819 901 322 aa, chain - ## HITS:1 COG:PA3445 KEGG:ns NR:ns ## COG: PA3445 COG0715 # Protein_GI_number: 15598641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 30 318 23 311 323 316 54.0 3e-86 MALFNSTSWAKYSVIAASLAGVMMLGGCAKKEEHTTTTLNIGYQKYGILPILKARGDLEK ALKDQGVQVKWVEFPAGPQLLEGLNVGSVSLGEAGEAPPIFAQAANPNLVYVANQPAAPK AEALLVQKDSPIQSIKDLKGKRVALNKGSNVHYLLLKVLEANHLSLSDIQPVYLPPSDAR AAFEKGAVDAWVIWDPFFAAAEHQIQARVLATGENLVSNHQFYLADRKFAENNPKVLNAV VQTLNQTTEWVSTHQDEAAKLLEKPTALEFDVLKTSISRMGFGVQPISDKVAQEQQYVAD AFYAQKLIPNKLTIQEAILKLK >gi|333032586|gb|GL891840.1| GENE 16 14153 - 15508 1329 451 aa, chain - ## HITS:1 COG:PA5204_1 KEGG:ns NR:ns ## COG: PA5204_1 COG0548 # Protein_GI_number: 15600397 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Pseudomonas aeruginosa # 16 294 4 280 282 294 51.0 3e-79 MPTKSLEKSHNNTQHYVHWFRHSAPYINAHRDKTFVLMFGGEAVRDPNFEHIIHDIALLH SLGIRLILVHGARPQINHNLKEKGIETPFYDNCRITTRESLSCVMSAVGSIRLEIEALLS MGLANSPMYGARIDVVSGNFVTAKPYGIREGMDFQLTGEVRSIDTDAIERHLDNNNIVLL GPTGYSTTGEVFNLRAEEVATKTATYLKADKLIFLGEQQGLPNEDGQLLRELSPHQLDYY IQQYQTTHPTLTLHLQEAKKASLSGVHRVHLISYSYDGALIEELFTRDGVGTMITDAHYE EVRMAHIQDVGGLMNLLRPLEEEGILVYRSRERLEQEINQFAVIERDGMILACAALYPIP TEFNETRSAEIACVAVHPSYRKSNRGSQILQFLEEKAKQQGIRQLFVLTTRTAHWFLEHG FHQVSVDDLPNARQALYNYQRNSLVFKKLLP >gi|333032586|gb|GL891840.1| GENE 17 15629 - 15949 293 106 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003479 NR:ns ## KEGG: ABBFA_003479 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 106 1 106 106 179 99.0 4e-44 MKKITTAIILSMSGLIATTAMAAPHDHYHHQGYETKTVKVIHKDDHANIWRAGQVVPHQY QHPRYVIDYRSHQKLTKPGRYQKWYKVNGNYVLVNEQSHKIIKVIR >gi|333032586|gb|GL891840.1| GENE 18 16173 - 16583 576 136 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3837 NR:ns ## KEGG: ABAYE3837 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 136 27 162 162 210 100.0 1e-53 MKKLFTILALCITVLTTSMASFADPPFDRGHGPKGPKGGPRGEWNDRGHKFDRDDNGDRV RDERRMREERGFERLKQHRWQPGYVMPQHYRGNGYKVDYKDNNLPKPDRNQQWYKINNDY ILVDTDSNSIVSIRGF >gi|333032586|gb|GL891840.1| GENE 19 16801 - 17547 965 248 aa, chain - ## HITS:1 COG:VC1059 KEGG:ns NR:ns ## COG: VC1059 COG1028 # Protein_GI_number: 15641072 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Vibrio cholerae # 6 247 3 244 247 258 54.0 7e-69 MKYSEYQPRPDLLKDRIILITGAGDGIGRAAALSYALHGATVVLHGRTLNKLEVIYDEIE GLGAPQPAILPLQLSSASDRDYDFLVSTLEKQFGRLDGILHNAGILGERVELAHYPAEVW DDVMAVNLRAPFALTQALLPLLQKSENASVVFTSSGVGREARALWGAYSVSKVAIEAVSK IFAAEHTYPNIRFNCINPGATRTAMRAKAYPEEDPKTLPTPESIMPAYLYLMGEDSLTLN GQSIDAQD >gi|333032586|gb|GL891840.1| GENE 20 17613 - 18311 779 232 aa, chain - ## HITS:1 COG:PA3172 KEGG:ns NR:ns ## COG: PA3172 COG0546 # Protein_GI_number: 15598368 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Pseudomonas aeruginosa # 1 221 6 223 226 162 42.0 4e-40 MKAVLFDLDGTLIDTAADFIRIIQQMCRDARRPVVEADLIRTQVSEGARAMVKLVYPELD VTNPIFLAHRQNFLDLYGNNIVVDTDLFEGMYPLLEELEAQRIPWGIVTNKPRGLSESLL EKLNLTERCAVLVCPEDVSKTKPDPEPMYLAAKQLNIPANEIIYVGDHPRDIDAGRNADM YTILAAYGYLPIEHRDDLNAWQADSIVNTVTELHELLRQKLPALQENQRMIS >gi|333032586|gb|GL891840.1| GENE 21 18311 - 19024 869 237 aa, chain - ## HITS:1 COG:PA3171 KEGG:ns NR:ns ## COG: PA3171 COG2227 # Protein_GI_number: 15598367 # Func_class: H Coenzyme transport and metabolism # Function: 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase # Organism: Pseudomonas aeruginosa # 5 232 3 228 232 343 70.0 1e-94 MSQLNVDLQEIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERAGGLAGKKVLDVGCG GGILAESMARRGADVLGIDMGEAPLAVGRLHAQQENVQNIEYRQIPVEELAQEQAGQYDV VTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGT HDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTGA >gi|333032586|gb|GL891840.1| GENE 22 19204 - 19821 674 205 aa, chain + ## HITS:1 COG:PA5489 KEGG:ns NR:ns ## COG: PA5489 COG0526 # Protein_GI_number: 15600682 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Pseudomonas aeruginosa # 1 204 1 208 211 168 40.0 7e-42 MKKLVLGGLSAAIMAVSGSAMAADFVAGKDYTVIANPGKVEVPGKIEVREFFWYGCPHCF KLEPHMQTWLKQIPSDVRFVRTPAAMNKVWEQGARTYYTSEALGVRKRTHLPLFHAIQVN GQQIFDQASAAKFFTRYGVPEQKFNSTYNSFAVTAKVAESNKLAQQYQLTGVPAVVVNGK YVVQGEDGKVTQVLNYLIEKERKAK >gi|333032586|gb|GL891840.1| GENE 23 19899 - 20546 535 215 aa, chain - ## HITS:1 COG:PA2957 KEGG:ns NR:ns ## COG: PA2957 COG1309 # Protein_GI_number: 15598153 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 8 189 10 194 212 66 25.0 3e-11 MNLDRHTQFLMRKEKILSVAEKLLLENNQEITLDELVAELDIAKGTLYKHFRSKNELLLE LIIQNEKQILEISQKYNTDFKEYAPRYMLHHLLTPGKTILLHQLEENLTMTESKLKHLFE ELYEVRQQRILAIKDITESYLKSLNYDMSIRDYLSYIWSLTYGASLLLNSTYYQRSIGSR QKLINLYINQALSLPTQTTNFDALNFQIEDENSQN >gi|333032586|gb|GL891840.1| GENE 24 20683 - 21321 728 212 aa, chain - ## HITS:1 COG:ZyijC KEGG:ns NR:ns ## COG: ZyijC COG1309 # Protein_GI_number: 15804561 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 EDL933 # 1 145 20 162 234 111 41.0 1e-24 MSIRDERKQQSRQALLDAALHLSTSGRSFSSISLREVAREVGLVPTAFYRHFQDMDELGK ELVDQVALHLKSVLHQLGQSYLQHKSAKTQTSIELFVQAVNHSPKQWQFMIAERWGGSET VRAAIAREIEFLIEDLTTDLTKLENFKHIQNPQDLNVLSTILTNMSFTWAMTWLNLAKQY QGEQLKQQQTAFIENASTQVRLLFRGIANWER >gi|333032586|gb|GL891840.1| GENE 25 21494 - 22519 754 341 aa, chain + ## HITS:1 COG:MT3327 KEGG:ns NR:ns ## COG: MT3327 COG1018 # Protein_GI_number: 15842819 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Mycobacterium tuberculosis CDC1551 # 18 341 46 380 380 139 28.0 1e-32 MNATLNYQPHWVREDFVDFVLQKINATWAWKRVLAEVTAVQPLHTDMVLIKLKPNRNFNF EQVCAGRSILLTLLIDGVYQQRSYSIIEVTTQGEIALGIKVQGLVSRAAQLLHVGECVEI SQPQGDFTLHQGQQPAILIASGSGITAIYSLLQQALKQQLEQIHVIYFNRAEIFHAELKA LAEQHPQLQYHFFNTSEQKQHLTESLLQKLVPDFAQTATYICGHHGMMQQANEIYTQKGA QSQLHQEYFQPLQVTGTHAAQPVIFRRAQQEFLAETNLLSSAEQAGLRPQHGCRMGVCNK CSCTKVSGVTQNLLTGEIEDQPNRPIKLCVSQALSPVTIDL >gi|333032586|gb|GL891840.1| GENE 26 22544 - 23692 1275 382 aa, chain + ## HITS:1 COG:MT3326 KEGG:ns NR:ns ## COG: MT3326 COG3239 # Protein_GI_number: 15842818 # Func_class: I Lipid transport and metabolism # Function: Fatty acid desaturase # Organism: Mycobacterium tuberculosis CDC1551 # 14 362 10 360 427 325 45.0 1e-88 MNMALKVSIASKSAHLTPEQIEEFGRRVEQIRQDVMQSLGEQDAKYIYKVRNFVRYTEIA SRGMLMFGGWIPPVWLLGTGLLGISKIVENMELGHNVMHGQFDWLNEPSLDGNTYDWDTI ASGDDWRETHNYVHHTYTNIVGKDHDVGYGILRVSDQQKWEPRHLFNIPLALQLMFFFEW YVGVQNLHLEDALVYKTKSWKQVWEDATKVRKKATRQVLKDYVFFPVISGPMFLPVFAGN VVANIIRNLWSSAVIFNGHFTEDAETFEPDNTDTETKAEWYLRQIRGSSNFSGTEWLHFM SGNLSHQIEHHLFPDMPANRYKEVAPKIKALCAEYGINYNEANFMRQFWSVWVRLAKCSL PNHTTAKVMQTLEKLKAKFKFA >gi|333032586|gb|GL891840.1| GENE 27 23851 - 24567 1029 238 aa, chain + ## HITS:1 COG:PA5334 KEGG:ns NR:ns ## COG: PA5334 COG0689 # Protein_GI_number: 15600527 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Pseudomonas aeruginosa # 2 237 3 238 239 303 68.0 2e-82 MRIDQRALDQLREVKITRNYTRYAEGSVLVEFGHTKVLCTASIDNSVPRFLKGQGQGWVT AEYGMLPRSTHSRCDREAARGKQTGRTQEIQRLIGRSLRAMVDLKKLGENTITIDCDVIQ ADGGTRTASITGAAVALVDAMNVLLAQKKIKQDPLKGLVAAISVGMYQDEVLLDLCYEED SNCQTDLNVVMTQAGEFIEIQGTAEDKPFTRAQSNAMLEMAEKGIAELIKKQQEALGW >gi|333032586|gb|GL891840.1| GENE 28 24857 - 27025 2243 722 aa, chain + ## HITS:1 COG:PA3319 KEGG:ns NR:ns ## COG: PA3319 COG3511 # Protein_GI_number: 15598515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phospholipase C # Organism: Pseudomonas aeruginosa # 2 718 5 686 692 669 49.0 0 MNRREFLLNSTKTMFGTAALASFPLSIQKALAIDAKVESGTIQDVKHIVILTQENRSFDN YFGTLKGVRGFGDRFTIPMTEGRKVWEQYDANKKKVLPYHLDSRLGNAQRVTGTNHSWSD GQGAWDNGRMSDWVAHKQPQSMGYYKKQEVEYQFALANAFTICDAYHCAMHAGTNPNRKF IWTGTNGPTGAGVASVVNEFDGIGPSTEGYEWTTYPERLQQAGVTWKVYQNMPDNFTDNP LAGFKQYRRANEQSGQPVSNDTLTCPAYDEKIDVTQPLYKGIANTMPDGGFLGTFKADIA QGKLPQVSWLVAPATYSEHPGPSSPVQGAWYIQEVLNALTENSQVWSQTVLLVNFDENDG FFDHVPSPSAPSKDINGVVYGKTTLTDQQVSYEYFNHPAVATSKSQPETDGRVYGPGVRV PMYVISPWSRGGWVNSQVFDHTSILQFLEKRFGVHEPNISPYRRAVCGDLTTAFNFKTPN LLPVAELDGKKTKAEADAIRVAQELLPQVSVPSQQQFPQQEIGIRPSRALPYILHTSAKV DVTQKTVKLMFSNTGKQAAVFHVYNRLDLTAIPRRYMVEAGKQLDDVWNTINGQYDLWLL GPNGFHRAFKGNLSQANQTQALPEIRVCVEECDANLYLKVRHDGNKSVKLNVKANAYLPN KTWAIETNSVEKELVWDMSEFGGWYDFTVTLADDATFSRRFAGRIETQEDSISDPYMGYL ES >gi|333032586|gb|GL891840.1| GENE 29 27493 - 27660 263 55 aa, chain + ## HITS:1 COG:no KEGG:AB57_0086 NR:ns ## KEGG: AB57_0086 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 55 1 55 55 85 100.0 9e-16 MLQGFIVLLAVVTFVLMAADPRDSGAQATQSAWQKTQAADMTKSQKNTNNDADFI >gi|333032586|gb|GL891840.1| GENE 30 27657 - 28502 472 281 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 3 278 2 283 286 186 35 2e-46 MSIPQSLLEQSIQINIQQALQEDIGDGDITAMLTPEDEQATATIISREDMVLAGQPWVNA LISAYDNTVQVTWLKHEGDRVAANEAFLKLAGSARSLLTVERPALNFIQTLSAVATKTAE YVQHLEGLNTKLLDTRKTLPGLRIAQKYAVTVGGGQNHRLGLFDAFLIKENHIMAAGGIA QAIAKAHQIAPGKPVEVEVETWDELNQALEAGADIVMLDNFSQQQMIDAVKHVAGRCKLE ASGNITIENLREVATTGVDYISMGVLTKDVKAVDLSMRFNA >gi|333032586|gb|GL891840.1| GENE 31 28674 - 29243 465 189 aa, chain + ## HITS:1 COG:HI0300 KEGG:ns NR:ns ## COG: HI0300 COG3023 # Protein_GI_number: 16272255 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Haemophilus influenzae # 1 180 1 179 184 201 51.0 8e-52 MKQITPYEVIDGQLKGARQVPSPNFNQRPAGTEIQMIVVHNISLPPSQFGGGYIEQFFQN KLDWSVHPYFQTIEGMQVSTHLLILRTGEVLQFVNFNDRAWHAGRSSYLAKVECNDYSIG IELEGSDDLPFEEVQYTVLTDVVTAIRQAYPEIKNHIAGHSDIAPGRKTDPGPYFKWQHF RQLLAQKKT >gi|333032586|gb|GL891840.1| GENE 32 29325 - 30866 1056 513 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145628098|ref|ZP_01783899.1| 30S ribosomal protein S20 [Haemophilus influenzae 22.1-21] # 3 511 5 520 524 411 43 1e-114 MALWRSTFIVSAMTMLSRVLGLVRDVVLLNVFGAGKDFDTFVVAFRIPNFFRRLFAEGAF SQAFIPVLTEYKTGRAHAEVQILISRVFGCLLTVMTLLTFVAMVLAPAIIYMYAPGFHND PEKFDLAVSMFRLTIPYLMFMSLTAFASSILNSYGSFASPAFSPVLLNVAMIAGAWWLTP YMAEPIKALGWSVVAAGILQLAIQIPELWRKNLLIPPKVDFKHEGVERILKLMLPALFGV SVTQINLLLNTIWASFMQDGSVSWLYSAERMTELPLGLIGVAIGTVILPSLSARHAEQDQ AKFRSMIDWAAKVIVLVGLPASIALFMLSTPIIQALFQRGEFDLRDTQMTALALQCMSAG VISFMLIKVFAPGFYAQQDTKTPVRVGLMSVAANAILNVVFIGFFKLINWHAEHMALALA SSGSALVNAGLLYFYLHKRNIFRFGAHWKKLALQYGLANLAMIAALWFGLNWYNGELSQW IRVAEVVGLCVVGVIAYLIGLLLTGFRPRDLKH >gi|333032586|gb|GL891840.1| GENE 33 30912 - 31607 778 231 aa, chain - ## HITS:1 COG:NMB1567 KEGG:ns NR:ns ## COG: NMB1567 COG0545 # Protein_GI_number: 15677418 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Neisseria meningitidis MC58 # 32 228 53 252 272 164 45.0 1e-40 MKKISLVIAASTMSLSVFAAAPITNKSPAKDQFSYSYGYLMGRNNTDALTDLNLDIFYQG LQEGAQNKTARLTDEEMAKAINDYKKTLEAKQLVEFQKQGQQNAQAGAAFLAENAKKSGV VTTKSGLQYQVLKEGSGKTPKATSRVKVNYEGRLLDGTVFDSSIARNHPVDFQLNQVIAG WTEGLQTMKEGGKTRFFIPAKLAYGEVGAGDSIGPNSTLIFDIELLQVLPK >gi|333032586|gb|GL891840.1| GENE 34 31657 - 32379 885 240 aa, chain - ## HITS:1 COG:PA3262 KEGG:ns NR:ns ## COG: PA3262 COG0545 # Protein_GI_number: 15598458 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Pseudomonas aeruginosa # 41 240 30 228 253 159 46.0 3e-39 MSKALPIAVAVVLGGAALVPVYYATQHPTTEVGRKADKNASPIQKISYVLGYEVAQQTPP ELDTKAFVQGIHDARNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADA QFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSVVKVHYEGRLINGQVFDSSYKRGQ PVEFPLNQVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQELPGIPANSTLIFDVELISVK >gi|333032586|gb|GL891840.1| GENE 35 32571 - 34754 2336 727 aa, chain - ## HITS:1 COG:ECs2865_2 KEGG:ns NR:ns ## COG: ECs2865_2 COG0489 # Protein_GI_number: 15832119 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Escherichia coli O157:H7 # 454 723 4 277 280 249 47.0 2e-65 MNQNTNTEDTIDLKELFFSLIAQWKLIALCVILSLVCALLYLRVTPDTYSVDALVQVEDS KGASAALLGDLSQMIEQKSPAQAEIEILKSRLVLGSVIKDLHLNIQVSSTENTFTHRLLS NPEYKTEYTKKSVIFKDGLKSFDIHQFDIPAYYLDKNLFLDFDKQSFRLTDPKTEEVILT LPLNQLNQVTGPHGTWKVAIFTKDQFDATYNIRNLSLPAAVNSISSNYSVAERGKLTGIL GLNYQGQDQEHITKVLNAILATYSAQNIERRSAESAQTLKFLDEQLPDLKKQLDDAERQF NKFRQQYNTVDVTKESELYLTQSITLETKKAELEQKQAEMAAKYTAEHPAMREINGQITA INKQIGELNSTLKQLPDVQRQYLQLYREVEVKTQLYTALLNSYQQLRIAKAGEIGNVRIV DTAVEPIEPIKPKKLQILVLALFLGGFIGALVALLRNMLRTGIKDSSQIENELNLPVYAT VPRSPIQESRIKILKKKKSIPILAVKNSDDIAIESLRSIRTAIHFALANAKNNIIMIAGP SPEVGKSFISTNLATIFAQGDKRVLLIDADMRRGYMHKYFDVDVKPGLSELLSGQADLQK VLHKTQVANLDMITRGKSPTNPSEILSSNQFKELLEQLQSQYDHIIIDTPPVLAVTDGII ISQYTGVNLIVARYAKSQMKELELTVNRFEQAGVKVNGFILNDIQRASAGYGYGYNYAYA YKAQKED >gi|333032586|gb|GL891840.1| GENE 36 34774 - 35202 417 142 aa, chain - ## HITS:1 COG:RSp1019 KEGG:ns NR:ns ## COG: RSp1019 COG0394 # Protein_GI_number: 17549240 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Ralstonia solanacearum # 4 142 3 141 145 124 43.0 4e-29 MQFKNILVVCIGNICRSPMAEYLLKQQYPQLNIESAGISGLTGHQADEKARLCMQRLGID MQPHIARKLSAEHIKKADLILVMSQNQQKHIEQTWPFTKGKTYRLGHWQNKNVPDPYQHD QAVFDETCQLIQQCVADWKPYI >gi|333032586|gb|GL891840.1| GENE 37 35208 - 36308 1165 366 aa, chain - ## HITS:1 COG:RSp1020 KEGG:ns NR:ns ## COG: RSp1020 COG1596 # Protein_GI_number: 17549241 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protein involved in polysaccharide export # Organism: Ralstonia solanacearum # 8 358 11 373 381 189 34.0 8e-48 MKYCQFFSVLALSLSAASCAVTSGLQTYDIPNEGVYKTDLGTTVNVVKISQETLPAIQPA QVDYQRDYATLFKTQQSIYRLSPGDVLSIQLWAYPEITPPVNSISNEHSIQANGYPIDQS GYIQFPLVGRYKASGKTLAQVNRELHSQLARFLKNPDVIVRVLSYEGQRFSVQGSVLKGG QFYLSDQPVSVYTALGLAGGVTDKGDNTYIQLIRNGITYNLNTIELEKAGYSLHKLLVQP NDTIYVSTRENQKVYVMGESGKNQALPMRDQGMTLSDALGESLGLNPLSASASRIYVLRT NPNDRTTELYHLNLMSLGDFGLANQFKLRSNDIVYVDATGLTRWQRVVNQIIPFSSALYN IDRLGQ >gi|333032586|gb|GL891840.1| GENE 38 36664 - 37938 1248 424 aa, chain + ## HITS:1 COG:PM1003 KEGG:ns NR:ns ## COG: PM1003 COG0677 # Protein_GI_number: 15602868 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetyl-D-mannosaminuronate dehydrogenase # Organism: Pasteurella multocida # 1 424 1 424 424 675 78.0 0 MQIAKLKIAIIGLGYVGLPLAVEFGKKVPVVGFDIYQKRIDELKNGQDHTLEVSPEELKQ AVHLNYTAHLNDLQDSNFFIVTVPTPIDDFKQPDLTPLIKASTSIGQVLKKGDVVVYEST VYPGATEEVCIPVLEKVSGLKFNQDFFAGYSPERINPGDKQHRVTNILKITSGSTPEVAD YIDEVYNLIIEAGTHKAPNIKVAEAAKVIENTQRDVNIALINELALIFNKLDIDTEDVLK AAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQSIGLHPEIILAARRLNDRMGEHVATQL IKEMVKQRIQVVGARILVMGLSFKENCPDIRNTKIVDFIKALKEYDLDLDIYDPWVDDTE VQHEYGLAPIKELQQGLYDAIVIAVAHNQFKSMSVEEFHALGKEKHVLYDLKYVLDKESS NIRL >gi|333032586|gb|GL891840.1| GENE 39 37952 - 39148 1176 398 aa, chain + ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 26 380 266 593 608 114 27.0 3e-25 MSTDIQLNLIGRTQELFVEDIQHWNNKLIEIVSSSKFLVLGGAGSIGQAVVKEIFKRNPK KLHVVDISENNLTEVVRDIRSSFGYIDGDFQTFALDIGSAEYDAYIENDGDFDYVLNLSA LKHVRSEKDPFTLMRMIHVNILNTEKTIQQSIAKGVKKYFCVSTDKAANPVNMMGGSKRI MEMFLMRQSQYIDISTARFANVAFSDGSLLHGFNQRIQKNQPIAAPNDIRRYFVTPKESG ELCLMSCLLGENRDIFFPKLSEHLHLITFADIAVKYLNNLGYEPYLCESEDEARSLIQTL PKQGKWPCLFTGSTTTGEKDFEEFFTDNETLDMQRFNNLGVIKNELNIEEDKLQVFEEKI NSMLLSKHWNKEEIVDLFNYMMPNFGHKETGLYLDGKM >gi|333032586|gb|GL891840.1| GENE 40 39148 - 40296 1168 382 aa, chain + ## HITS:1 COG:Cj1320 KEGG:ns NR:ns ## COG: Cj1320 COG0399 # Protein_GI_number: 15792643 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Campylobacter jejuni # 10 379 9 377 384 339 47.0 4e-93 MDTSKFNQIVRDIYQTNNFIPLHEPRFLGNEKKYVLDTIDSTFVSSVGAYVNEFESKIQH FTGCAKAIATVNGTAALHIALLLAGVKRDDIVITQALTFVATCNALSYIGAEPLFIDVSL KTMGLCPKALDTYLQENAFLDDQGVCTHKATNKRISAIVPMHTFGHPVEIDELQEVVTKW NIALVEDAAESLGSYYKGKHTGIFGLVSALSFNGNKVITTGGGGMVLCQDEELGVRAKHI TTTAKIPHPYEFYHDENGFNYRLPNLNAALGCAQMESLEDFLSKKRNLAHQYQNFFKDTD ISFFVEPENCQSNYWLNAIICKDKTQRDLILDETNSNKVMTRPIWTLMTRLPMYENALQG DLTNSLWLEERVVNIPSSVPLE >gi|333032586|gb|GL891840.1| GENE 41 40302 - 41438 1017 378 aa, chain + ## HITS:1 COG:Cj1328 KEGG:ns NR:ns ## COG: Cj1328 COG0381 # Protein_GI_number: 15792651 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Campylobacter jejuni # 2 362 4 365 384 274 40.0 2e-73 MKKIAVFTGTRAEYGLLYWLMRDIQQDPELELQILATAMHYSPEHGETWKTIVKDGFEIT ESVEMLLSSDTSSAVVKSMGVGLLGFADALKRMQPDVLVVLGDRFEALAVTQAALIMHVP VAHLHGGEITEGAYDESIRHAITKMSNIHFAAAEEYKKRIIQLGEQPERVFNVGALGLDH IQRTTFKSISELSELYDFDFSKPYFLITYHPETNLLEENVAPLFDALKQINDVNFIFSYP NADNGNTNIVKAMLDLKAQLPDRVLLVKSFGIQNYLSVLKNALAMVGNSSSGLSEAPALQ VPTVNIGDRQKGRLRCESILDVRLDENEIVEALQKAINFPKDQLSQVVPPLGLGNTSQKI IEVIKTTDFKKKAPFYDL >gi|333032586|gb|GL891840.1| GENE 42 41428 - 42522 1106 364 aa, chain + ## HITS:1 COG:Cj1327 KEGG:ns NR:ns ## COG: Cj1327 COG2089 # Protein_GI_number: 15792650 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sialic acid synthase # Organism: Campylobacter jejuni # 10 362 6 332 334 256 41.0 7e-68 MIFNQDEIYVIAEIGVNHNGSVDLAKELILKAKDCGANAVKFQTFKADSLLSDQTEMAAY QKENTGSSQSQLELVKSLELTYEQTEEIKKFCDEQEITFISTPFDSDSLKFLVNDIDVPY LKVSSADISNLPFLYEIACSKKHVILSTGTASLGDIEQALSVFAFVIDKGTEVRPSQQLF REAYSKISVRKQLKQQVSILHCVTQYPALFEESNLKAISTLKNVFDLATGFSDHTLDEYA AVIGVSLGARIFEKHITLDKTMAGPDHAASMEPDEFKHYIEILHKTYAALGDGIKFMLEQ ESDNYYLVRRSIVAKTDIAEGELLTSDNVTTKRAGRVCLEPNKYWDVVGTKAKRSFKKND FIEI >gi|333032586|gb|GL891840.1| GENE 43 42523 - 43164 318 213 aa, chain + ## HITS:1 COG:NMB1820_2 KEGG:ns NR:ns ## COG: NMB1820_2 COG0110 # Protein_GI_number: 15677656 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Neisseria meningitidis MC58 # 25 212 1 182 190 80 30.0 1e-15 MKKLAIFGSGGFAKELVDLAIDQGYRHIFFLERNAKDGDTLLGFPILPESAISTLTDTVY AIGVADPKIRKRIYEAYPDLPYPNLIHSQSSLGYGIRELLEHSRGVVIAAGARITNSCRF GHFIIVSFNSTIGHDCILENYVSVMPGVNVSGCIHLKQGTYIGTNAAILPGKSPEQLKYL GENSVIGSGAVVVKHTEPNKVYIGSPAKELSRD >gi|333032586|gb|GL891840.1| GENE 44 43157 - 44212 1093 351 aa, chain + ## HITS:1 COG:Cj1329_2 KEGG:ns NR:ns ## COG: Cj1329_2 COG1208 # Protein_GI_number: 15792652 # Func_class: M Cell wall/membrane/envelope biogenesis; J Translation, ribosomal structure and biogenesis # Function: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) # Organism: Campylobacter jejuni # 121 346 4 228 228 193 43.0 4e-49 MTRDVNNIILHKNDSILKALELLDLYALRIVLVVDDNNQLIGSITDGDIRRGLLKGQDLH ASVDTIMHTNPYSIEEGSLDNRQIFEIMREKSYLALPIIKNNQLVNIITLDDLIRKKRKE NPVFIMAGGFGTRLRPLTDTCPKPMLPVGGKPLLETIISSFKNQGFYKFYISTHYLPEVI NEHFGNGEKFDVQIQYVHETDPLGTGGALSLLPASDIKLPFIVINGDVLTNMNFEKLLDF HEKREAIATMCVREFQYQIPYGVVNSEDNIIQSMTEKPSYYFNINTGIYVISPKILQQVE AKFIGMPTILEQQMAKFEKVVSYPLHEYWLDIGQIEDYHKAQQDIKVIGLI >gi|333032586|gb|GL891840.1| GENE 45 44212 - 44901 535 229 aa, chain + ## HITS:1 COG:HI1279 KEGG:ns NR:ns ## COG: HI1279 COG1083 # Protein_GI_number: 16273194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CMP-N-acetylneuraminic acid synthetase # Organism: Haemophilus influenzae # 8 228 8 226 228 138 38.0 7e-33 MIDNKRVIAVIPARAGSKSIKDKNIKLLGGKPLIAWPIDTAKKSKYIDRILVSTDGQKIK EIAESYDAEVYLRPESLAQDNSLLIDTLRYMIKELKREGESAKYLIVLEPTCPLRSVEDV DNVIEKLIENDSAATFMEAELNPHRAWKIEDSHVCPFIEGAIPWLPRQKLPKAYQLNGAV YGFNIDKLPDTGISVLFGNIAAVKMPRERSIDIDFNIDFIIAEELLIKS >gi|333032586|gb|GL891840.1| GENE 46 44913 - 45653 450 246 aa, chain + ## HITS:1 COG:SSO1030 KEGG:ns NR:ns ## COG: SSO1030 COG0300 # Protein_GI_number: 15897898 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Sulfolobus solfataricus # 10 185 6 177 247 85 30.0 6e-17 MKKITKQNILITGASSGVGKMLVKELKSVFNIVTISRRVENIIKDNPEVMAYSCDVSNKV ELLETLDLINRKVGHCSYIINCAGVLDAGFLDNNKIKNLEYSINVNAIAPIMIINNFLEK MKENNFGRIINLTSGAPLNCYPGFSLYSTSKAALNSLTTTLAREVENYNISINLMSPGPV KSEMSPDALIDAIVCLPTIKYLLDGNGKNQHQFFYWLGYKVPLFPDLDGINWLEGIGNEK IEKVVF >gi|333032586|gb|GL891840.1| GENE 47 45656 - 46187 300 177 aa, chain + ## HITS:1 COG:no KEGG:Dfer_1894 NR:ns ## KEGG: Dfer_1894 # Name: not_defined # Def: oxidoreductase domain-containing protein # Organism: D.fermentans # Pathway: not_defined # 1 174 1 175 301 145 40.0 5e-34 MLRLGIIGYSPKNGHPYSFSSILNGYNREAYLKTEWLGILNYLEKREQDEIASLDARVTH IWTQSLDLSKQIARCSKIDHVVSNYQDMIGYIDGVIIARDDYEIHKEIAQCFLEENIPVL IDKPLTLSKEELQWYKPFYDKGLIMSCSGFRYCRELDDVRENLEKFGDIKLIRAAVI Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:41:33 2011 Seq name: gi|333032585|gb|GL891841.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld55, whole genome shotgun sequence Length of sequence - 13690 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 10, operones - 4 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 915 1005 ## COG2907 Predicted NAD/FAD-binding protein 2 1 Op 2 . + CDS 920 - 1747 623 ## ABAYE0215 methyltransferase 3 1 Op 3 . + CDS 1756 - 2178 312 ## COG3791 Uncharacterized conserved protein - TRNA 2820 - 2895 94.2 # Thr TGT 0 0 - Term 2931 - 2985 0.8 4 2 Tu 1 . - CDS 3020 - 4264 1111 ## COG0477 Permeases of the major facilitator superfamily - Prom 4364 - 4423 5.8 + Prom 4305 - 4364 4.9 5 3 Tu 1 . + CDS 4403 - 5323 281 ## PROTEIN SUPPORTED gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 6 4 Tu 1 . - CDS 5320 - 6207 627 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 6388 - 6447 11.9 + Prom 6304 - 6363 9.0 7 5 Op 1 . + CDS 6436 - 7179 723 ## ACICU_03466 hypothetical protein 8 5 Op 2 . + CDS 7204 - 7596 492 ## ABBFA_000247 hypothetical protein + Term 7605 - 7636 2.1 - Term 7586 - 7631 8.2 9 6 Op 1 . - CDS 7643 - 8644 1181 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) - Prom 8676 - 8735 3.1 - Term 8682 - 8728 0.4 10 6 Op 2 . - CDS 8756 - 9676 454 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 9812 - 9871 9.4 11 7 Tu 1 . - CDS 10280 - 10474 61 ## gi|332873587|ref|ZP_08441535.1| hypothetical protein HMPREF0022_01141 + Prom 10544 - 10603 2.9 12 8 Tu 1 . + CDS 10787 - 11338 327 ## ACICU_03460 TetR family transcriptional regulator + Term 11439 - 11489 -0.9 + Prom 11349 - 11408 4.7 13 9 Tu 1 . + CDS 11576 - 12091 606 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Prom 12149 - 12208 7.1 14 10 Op 1 . + CDS 12234 - 12539 274 ## AOLE_01135 hypothetical protein 15 10 Op 2 . + CDS 12584 - 13465 699 ## AOLE_01140 hypothetical protein + Term 13609 - 13646 0.1 Predicted protein(s) >gi|333032585|gb|GL891841.1| GENE 1 1 - 915 1005 304 aa, chain + ## HITS:1 COG:AGc3599 KEGG:ns NR:ns ## COG: AGc3599 COG2907 # Protein_GI_number: 15889269 # Func_class: R General function prediction only # Function: Predicted NAD/FAD-binding protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 285 151 424 457 90 26.0 3e-18 SYLFLSCTEKSKNQDITLAEFINQNDIEEVFWHGVVMPVLYTICTCNPKTIGDWPAKNLL EFLRHLTDGDMLLRMKGGTPAFVDSLIKGIDIHSGSAIKKVELQGEKVLVENEKGDQGTF DRVIVATPTSKLEEFLNPEQFAEDMNLLKQFRFEQGDLVIHTDATVMPPRRKDWSVLSYM MDRKFTRQQFTVWMNAVEPSLVGKNPVFQTWRPVVDIDPKKVISKVTLTRAVVDSQTIAL NKELQQRHLEPNRKVFYCGSWSCDGLPILESAVTSAMHIAEILGAPLPFVGLKPKVEVAP ELGY >gi|333032585|gb|GL891841.1| GENE 2 920 - 1747 623 275 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0215 NR:ns ## KEGG: ABAYE0215 # Name: not_defined # Def: methyltransferase # Organism: A.baumannii_AYE # Pathway: not_defined # 1 275 10 284 284 530 97.0 1e-149 MKAKVRAALSRFIPHKYAIDASSLGDSEELAWTNLGFWKNTQTYREACRQLADHLAQAVN LNSKDHLLDLGCGQGASLLHWLQHYHPKSLSAVELQASCVNKIQKLIPEISQIFCGSFLN LKQFEFKQRFDAILCIDAAYHSHLNSFLDSVTPVLNSKGRLGFHYLMRADSCHNMTMLQE QKHRYLLKAADVTWNTLLTEEILRTTLEQQGFTDIQIEDLSEQVLLGFSQYIQNQQAQSH NRGLANFKIQMTAKLCQQLYQNGYVRYIQITAIKK >gi|333032585|gb|GL891841.1| GENE 3 1756 - 2178 312 140 aa, chain + ## HITS:1 COG:mlr0112 KEGG:ns NR:ns ## COG: mlr0112 COG3791 # Protein_GI_number: 13470413 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 4 132 3 126 132 98 37.0 4e-21 MSVKYQGSCLCGAVSYQSDAEPRYSFNCHCRDCQKATGSAYAPIAFFHQSELKISGELKY FETLGSSGRPIKRAFCPTCGSQLFGLPELVPEMISIRAGTLDDPSLYHPKAEVFVSQTYA WDMLNPNLKHFEKMIEKSKK >gi|333032585|gb|GL891841.1| GENE 4 3020 - 4264 1111 414 aa, chain - ## HITS:1 COG:PA5030 KEGG:ns NR:ns ## COG: PA5030 COG0477 # Protein_GI_number: 15600223 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 13 390 29 404 438 269 43.0 7e-72 MNSSSTPSTLNTEATSVLSREWIHKGTKAYKHAGFALFLVGFASFSLIYCVQPLLPAFSQ SFQISPASSSLALSLTTAFLAISIVLSSAFSQAIGRRGVIFASMLCAAILNIVSMFTPNW HSLLIARALEGLLLGGVPAVTMAWIAEEIAPEHLGKTMGLYIAGTAFGGMMGRVGMGILV EYFSWRTALGLLGAICFICSIAFLKLLPTSRNFVQKKGLNLGFHMQMWRAHLSNTKLLRL FAIGFLLTSVFVTLFNYATFRLSGAPYSLSQTQISLIFLSYSFGMVSSSLAGSLADRFGK KTMMMSGFALMIVGSLMTLLTSLFGIIIGIAFITTGFFITHSLTSSSVGAESKQAKAHAS SLYLLFYYMGSSIVGSAGGWFWLHGGWSAIVGLTVVLSLIGIFLAVYTSHAKAH >gi|333032585|gb|GL891841.1| GENE 5 4403 - 5323 281 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149913192|ref|ZP_01901726.1| 50S ribosomal protein L35 [Roseobacter sp. AzwK-3b] # 1 278 1 274 305 112 26 1e-24 MELRHIRYFLAVAEEKNFTKAAQRLNMSQPPLSMQIRDLEEELGADLFIRSPHGVELTEA GLAFLNAIQPVQQRVEDAANLVKQVANGEVGQLRLGFTGTSMLNPLIPKCVRYFQQQYPK VNLKLEEANTLLLIDLLLEDRLDVAIIRSPRNMPDSLILQELLAEPLIAALPSESFQLDD ASHEIDLTALRELDFIVSPPSVSAGLFDAIKQACHERGFEPKIGQNAPQIVSILSLVSAN LGVSLVPESTKQLQIQGVAYRSLKAPVPTVGLGLAYKKHAPSQMAINFASVVQVACHHAN EINEIG >gi|333032585|gb|GL891841.1| GENE 6 5320 - 6207 627 295 aa, chain - ## HITS:1 COG:PH0070 KEGG:ns NR:ns ## COG: PH0070 COG0697 # Protein_GI_number: 14590024 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus horikoshii # 7 291 3 275 275 60 25.0 3e-09 MNNLIIGTLFALCAAALNASIGVISKLLMHSGLNPQDIAFLKTIIAFFFLSVFLFKVPVS QKIAFISSTPSKLSVFAQIAICAFLGIFSLFFFETIAYNHGAAANVVVVLMASAAISALF FGRFILKESIYIHSLIGTLLAVAGISIISWKGENSLLMLINASIAGTGYGLFSVLVKKFK LNGGLFLTKYLLLFGSVYLAVPFLVNLHSINFNSDIILGLIGLAVLPTILGFFCTTKALS YMSAAKVQVTELSEPIFAALMAWVFIHEQPTLSFLYGAIFIISGIFLMNRAPKSN >gi|333032585|gb|GL891841.1| GENE 7 6436 - 7179 723 247 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03466 NR:ns ## KEGG: ACICU_03466 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 247 1 247 247 470 95.0 1e-131 MIKSIITGCAVLTLSALAVTHAEFSYEQELQQGCNKVKQYASLGKKFYDQKQYKKALENF QNQASWTAFCKANADETTVKFTDRDIEVANNNVGLAYAKLGQPLWARAWFMLDEKSKSSQ FNLKQLPAPKASNDLSGEYVRYSGFGEWDHITVSRKQGQYAIGYSGVYMGLRSLIYGPNM GDFGTTMPTNAKQTIYKDQDCRIQLDFRTNAKLGNYIQVKQNEGESGCGFGHNVYADGTY LKVESGK >gi|333032585|gb|GL891841.1| GENE 8 7204 - 7596 492 130 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000247 NR:ns ## KEGG: ABBFA_000247 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 130 1 130 130 259 98.0 3e-68 MKNIFAPLLLVSTVIFSAHIYAEPTSTCKEVKFQKTDQAWSGHYYLHGVMEVGSELLLQP DGKFQWMLAVGALDQYAEGTWWKNGDCIGLKPEAKFKKDLSIFPESLTISDKSLDAIWEG GRQQGTYSKD >gi|333032585|gb|GL891841.1| GENE 9 7643 - 8644 1181 333 aa, chain - ## HITS:1 COG:AGc447 KEGG:ns NR:ns ## COG: AGc447 COG0667 # Protein_GI_number: 15887610 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 323 37 359 369 340 53.0 2e-93 MKYRTLGQTGEKVSALGLGCMGMSFAYGASDDTQSIATLEKALDLGINFWDTADMYGNGA NEVLLSKVLEKHRDKVFLATKFGFRYKEDNLNPKNSLESYIDGSPEWIKVAVENSLRRLN TDVIDLYYAHRIDPNVPVEDTIGAMADLVKQGKVRYLGLSEASAETIRKAHSIHPIAAVQ HEYSLLTREFEQTHLQTIRELGISLVPYSPLSRGLITNTLDVNNLDENDFRRQLPRYQGD NWKNNQSLAQAFSEFAQSKNATATQLALAWILAQGDDIIPIPGTRKIERLVENAGAVDLH LTAADLAEIDAIIARYPNMGARYNAQQLAAVNH >gi|333032585|gb|GL891841.1| GENE 10 8756 - 9676 454 306 aa, chain - ## HITS:1 COG:PA0248 KEGG:ns NR:ns ## COG: PA0248 COG2207 # Protein_GI_number: 15595445 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 199 302 191 286 288 64 37.0 2e-10 MHAGKDMETIHDFYRRFSLTRDSDYSVPSTSFGHFNVFQRDACSFLTPYSRRDYYKISLV LGTGELHYANRWIRVDRPALLFSNPMVPYAWEINSPEQAGWFCLFTEEFVNQESRQSFLK DSPLFKVDGDPLYFLNDQQVEEISFIFKKMMNEINSDYIHKYNVLRNYLHLIVHEAMKMQ PTQQFEKHSNASVRICHLFFELLERQFPIDSPHFQLKLKTANDYAYGLSVHVNHLNRAVK EATGKTTSEHISSRITQEAKALLQHTSWNISEIAYSLGFEYSAYFTNFFKKNTGFSPKKF REDCVA >gi|333032585|gb|GL891841.1| GENE 11 10280 - 10474 61 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873587|ref|ZP_08441535.1| ## NR: gi|332873587|ref|ZP_08441535.1| hypothetical protein HMPREF0022_01141 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01141 [Acinetobacter baumannii 6014059] # 1 64 37 100 100 133 100.0 4e-30 MMVVEREKVDRLTHKNQHAQGVPPSPYRYEGGRTSSPPKRELFDVLCVISICQNRLAMWP AGKG >gi|333032585|gb|GL891841.1| GENE 12 10787 - 11338 327 183 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03460 NR:ns ## KEGG: ACICU_03460 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 183 1 183 183 332 97.0 6e-90 MKNLEASFRALQVLHTAKDLFNQYGFHKVGVDRIIADSQIPKATFYNYFHSKERLIQMSL TFQTDALKEEVFSTIYSYRELMVFDKLKRIFFLHADSDGLYRLPFKAIFEIEKYYPSAYK VVIDYRNWLIQEIHKLLLTVKPAATVEDAHMFLFVVDGAMVQLLSSNQTDEREYLIDYFL SRV >gi|333032585|gb|GL891841.1| GENE 13 11576 - 12091 606 171 aa, chain + ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 17 162 165 301 327 71 34.0 8e-13 MSLFANPIFSDDLLKRATNGDTSAQLELADVYIYGWGIEENETQAEFWATKSAESGNVKA MQWLGEGYATYAGLVGDMDPADADEHYKKAFKWFSKGTQLNDADCMVGLANLYSSGDGVE QDTHKALELRKKAAALGNKQAMRDIAFMYEYGLGVEKNLEIAKYWSEKGKI >gi|333032585|gb|GL891841.1| GENE 14 12234 - 12539 274 101 aa, chain + ## HITS:1 COG:no KEGG:AOLE_01135 NR:ns ## KEGG: AOLE_01135 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 2 101 19 118 118 169 90.0 4e-41 MGKKYKISPESLPVAHINQEYQQIIKISGGKVIDKYAELETNIPENLGITVKPVDDLDGY NIIQIKGVPKYKGKYTIHIRADFYAGGDAEIDKTYSFIVQD >gi|333032585|gb|GL891841.1| GENE 15 12584 - 13465 699 293 aa, chain + ## HITS:1 COG:no KEGG:AOLE_01140 NR:ns ## KEGG: AOLE_01140 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 293 1 293 293 535 92.0 1e-150 MTVKFRQYFLILIFGLLLSACQPAAQHNESLDSHQQAYTLHMGEKGIQDFSKYSDSNVDN YPAGVSFRELQFSPPNLGKITIENGSNTLSIEHVFSVLGTQYDKNEGIQVLDIDAGLTKE EFATPEQVYQSYVALMKRINQAGWKNYFFTDAPRIAKEDNIKHLSKSRDVIDPSYIFSFE EWKNIINNSPTKSLGYRLYANGIILDISLKRTAKNKCNEEQYMLRFSFQSVRYNERDSIP DSDKMTPSEFEQAFKKRLIENKKYREKEEGKAKAEGYHIDEKYTDPDVWPYVK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:42:12 2011 Seq name: gi|333032584|gb|GL891842.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld56, whole genome shotgun sequence Length of sequence - 42807 bp Number of predicted genes - 39, with homology - 38 Number of transcription units - 23, operones - 7 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 104 - 163 6.2 1 1 Tu 1 . + CDS 347 - 1333 626 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 1346 - 1379 1.1 2 2 Tu 1 . - CDS 1402 - 2745 1435 ## COG0477 Permeases of the major facilitator superfamily + Prom 2898 - 2957 8.4 3 3 Op 1 . + CDS 3075 - 4325 1399 ## COG0412 Dienelactone hydrolase and related enzymes 4 3 Op 2 . + CDS 4338 - 5123 223 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 5 3 Op 3 . + CDS 5167 - 6405 1259 ## ACICU_01779 putative oxygenase subunit protein 6 3 Op 4 . + CDS 6434 - 6964 511 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 6975 - 7009 2.0 7 4 Tu 1 . + CDS 7018 - 7965 994 ## COG4313 Protein involved in meta-pathway of phenol degradation + Term 7979 - 8019 1.1 - Term 7961 - 8013 10.4 8 5 Tu 1 . - CDS 8025 - 9083 845 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 9438 - 9484 9.9 9 6 Op 1 2/0.333 - CDS 9521 - 10549 1041 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 10 6 Op 2 6/0.167 - CDS 10561 - 11052 540 ## COG5517 Small subunit of phenylpropionate dioxygenase 11 6 Op 3 . - CDS 11055 - 12470 1599 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - Prom 12680 - 12739 5.0 + Prom 12601 - 12660 5.4 12 7 Tu 1 . + CDS 12693 - 13043 422 ## COG2005 N-terminal domain of molybdenum-binding protein + Term 13046 - 13087 2.2 + Prom 13137 - 13196 5.6 13 8 Op 1 23/0.000 + CDS 13234 - 14019 727 ## COG0725 ABC-type molybdate transport system, periplasmic component 14 8 Op 2 13/0.000 + CDS 14088 - 14708 624 ## COG4149 ABC-type molybdate transport system, permease component 15 8 Op 3 . + CDS 14713 - 15333 225 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 15604 - 15663 9.5 16 9 Op 1 5/0.167 + CDS 15693 - 16463 218 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 17 9 Op 2 . + CDS 16536 - 17177 453 ## COG1535 Isochorismate hydrolase + Term 17232 - 17264 2.4 18 10 Tu 1 . + CDS 17705 - 18106 313 ## ABBFA_001739 ferric uptake regulation protein (ferric uptake regulator) + Term 18135 - 18165 -0.5 - Term 18119 - 18157 7.2 19 11 Tu 1 . - CDS 18174 - 19955 1907 ## COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases - Prom 20116 - 20175 9.2 + Prom 20108 - 20167 6.5 20 12 Tu 1 . + CDS 20354 - 22336 1719 ## COG0855 Polyphosphate kinase + Term 22344 - 22384 4.3 + Prom 22359 - 22418 6.7 21 13 Op 1 . + CDS 22560 - 22634 65 ## + Term 22655 - 22699 9.1 22 13 Op 2 2/0.333 + CDS 22710 - 23621 1000 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 23 13 Op 3 . + CDS 23630 - 24388 822 ## COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C 24 13 Op 4 . + CDS 24385 - 24669 379 ## ABBFA_001732 pyrroloquinoline quinone biosynthesis protein PqqD 25 13 Op 5 . + CDS 24666 - 25820 854 ## COG0535 Predicted Fe-S oxidoreductases 26 13 Op 6 . + CDS 25813 - 26889 864 ## COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog + Term 27061 - 27105 7.2 + Prom 27335 - 27394 8.2 27 14 Tu 1 . + CDS 27470 - 27646 192 ## ABAYE1876 hypothetical protein + Term 27654 - 27694 3.0 + Prom 27668 - 27727 10.6 28 15 Tu 1 . + CDS 27900 - 28136 227 ## ABAYE1875 hypothetical protein + Term 28174 - 28224 10.3 + Prom 28208 - 28267 7.0 29 16 Tu 1 . + CDS 28304 - 28891 467 ## COG3663 G:T/U mismatch-specific DNA glycosylase + Term 29014 - 29050 1.7 30 17 Tu 1 . - CDS 28900 - 30426 964 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 30564 - 30623 8.6 31 18 Tu 1 . + CDS 30892 - 31359 506 ## ACICU_01804 hypothetical protein + Term 31423 - 31450 -0.1 + Prom 32022 - 32081 10.8 32 19 Tu 1 . + CDS 32172 - 32537 333 ## ACICU_01805 hypothetical protein + Term 32577 - 32614 1.0 33 20 Tu 1 . - CDS 32615 - 33778 858 ## ACICU_01806 hypothetical protein - Prom 33856 - 33915 80.4 + Prom 33841 - 33900 80.3 34 21 Op 1 . + CDS 34106 - 35977 1274 ## ACICU_01807 hypothetical protein + Term 36011 - 36056 7.3 + Prom 36113 - 36172 6.4 35 21 Op 2 . + CDS 36207 - 37316 1367 ## COG1062 Zn-dependent alcohol dehydrogenases, class III + Term 37323 - 37367 6.2 - Term 37311 - 37355 4.1 36 22 Tu 1 . - CDS 37372 - 38322 666 ## ACICU_01809 hypothetical protein - Prom 38363 - 38422 5.4 37 23 Op 1 6/0.167 - CDS 38436 - 39452 944 ## COG3539 P pilus assembly protein, pilin FimA 38 23 Op 2 10/0.000 - CDS 39449 - 42007 2481 ## COG3188 P pilus assembly protein, porin PapC 39 23 Op 3 . - CDS 42065 - 42775 430 ## COG3121 P pilus assembly protein, chaperone PapD Predicted protein(s) >gi|333032584|gb|GL891842.1| GENE 1 347 - 1333 626 328 aa, chain + ## HITS:1 COG:PA2511 KEGG:ns NR:ns ## COG: PA2511 COG2207 # Protein_GI_number: 15597707 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 20 324 23 326 333 238 41.0 1e-62 MISLSQQMELNHYSRKAEFAQNLMSTICGEHRLDTIYKDNLDFHYDGMRLPNKKMAIGTI SYGANVAINISNLKAYSISLPIQGRQALNIRGAHYQSDENRGLIVSNNDQQDLIIDKDCR KFQVVIPERSMQIVLADLLNKPIETPIIFNPEMHLDSEQLIGAWWKNIQNFLQLKSQYSN FYGLQMLSEDYENFVIKALLLSQENNYSEALKSLSHQDEPAYIRKVRNFIIEHAHEEICA EDLQRLAGVSKSKLYDEFQQYYGTSPMSYLKKYRLQQIYKILSTTGADKKVSISKLAYDW GFNHLSRFSQEYREEFGENPSETKGKIF >gi|333032584|gb|GL891842.1| GENE 2 1402 - 2745 1435 447 aa, chain - ## HITS:1 COG:PA0235 KEGG:ns NR:ns ## COG: PA0235 COG0477 # Protein_GI_number: 15595432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 1 402 9 412 448 290 43.0 3e-78 MKTIDANTIINREKLSPLQWVVFILGFFVFFCDGLDTGIIGFVAPALLDDWGITKPQLAP VLSAALVGMSIGAIISGPLADKFGRKGVIVFTSLLFSIFTILCGFANSTQDLMIYRFITG VGLGAAMPNISTIVSEYMPVKRKAFLTGLAGCGFMLGISCGGVLSAYLLESYGWAKVIII GGSIPLILVVALLLKLPESTQYLITRHQQGKAQRILENIQGHSFQEPVKLVLTQSETASD ENPVKVVLGKYLWGSSMLWLCCFTSLLVFYLLTSWMPTILKTAGFSTQQFSLIAAIFPFG GVIGATIMGWYMDKLNPTTVIKYSYLIAFGLFIIAGLVSSNIFLLGLTIFLIGALLAGAQ SSLLPLAAMFYPAVCRAVGVSWMHGIGRIGAILGAFFGSLIFTFNLSLSGIFFILAIPTF ISFIALSLKVIYEKSKNKQVLKLEESL >gi|333032584|gb|GL891842.1| GENE 3 3075 - 4325 1399 416 aa, chain + ## HITS:1 COG:PA2682 KEGG:ns NR:ns ## COG: PA2682 COG0412 # Protein_GI_number: 15597878 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Dienelactone hydrolase and related enzymes # Organism: Pseudomonas aeruginosa # 3 412 2 410 413 545 62.0 1e-155 MAGQTIQIKTASGKQFSAYLATPETGKGPGVVLCQEIFGVNAAMREKADFLAEEGYTVLV PDLFWRVAPNIELGYTPDDFQKAFELYQQYDENLGVEDIQDSLAFLKIRPECDTSTGLGV VGYCLGGKLAYLAGCRLSEVACAVGYYGVGIEKTLDELANVKGRLVLHIAELDQFTPPDA RQAIVDAVNQYSNVQAYVYEGVDHAFARPKSNHYHKPSARFAHERTVTALHETIGPKYDL VTLWEEHIRHEFDTRDVPATMATMVAEPYVNHIPTLTGGVGQSQLARFYQYHFVHQNPKD MKITSISRTVGSTQVVDEFIMSFTHDAEIDWLLPGVKPTGKYVEIPMLGVIQFRGSKLCH EHIYWDQASVLVQIGLLDPTGLPVAGIETARKLLDEDLPSNTLMPSWSSSEGKPVS >gi|333032584|gb|GL891842.1| GENE 4 4338 - 5123 223 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 5 246 1 242 242 90 30 1e-17 MNINLRGKVAVVSGGATLIGKAVVQALVSAGAHVAILDIDAKGKAIAESFNHDVMFIQTD LTSDAAIQQAVADIHQHLGEVSCLVNLACTYLDDGFKSSRQDWLQALDINLVSTVELSRA LYHDLKKQQGSIVNFTSISAKVAQTGRWLYPVSKAAIRQLTQSMAMDFATDGIRVNSVSP GWTWSRVIAEVSGNNREKADSVAADYHLLGRLGHPEEVANVVLFLLSPAASFVTGADYAV DGGYSVMGPEGLQPAIPRLAE >gi|333032584|gb|GL891842.1| GENE 5 5167 - 6405 1259 412 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01779 NR:ns ## KEGG: ACICU_01779 # Name: not_defined # Def: putative oxygenase subunit protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 412 1 412 412 827 100.0 0 MRRIAIVGAGQSGLQLGLGLLDTGYDVTMITNRTADEIRQGKVMSSQCMFHTALQTERDL GLNFWEEQCPAVEGIGLALVNPENGGKAFEWSARLERYAQSVDQRVKMPYWMEEFERRGG RLVIQDVGIEELEQLVNDYELVLLAAGKGEVVKQFERDDARSVFDKPQRALALTYVKNMK PISPYSRVTFNIIPEVGEYFSFPALTINGPCDIMVFEGIPNGPMDCWQDVKTPEQHLQCS LDLLKKFVPWEYERCANVELTDAGGYLAGRFPPTVRKPVLTLPSGKKIFGMADALVVNDP ITGQGSNNAAKCSKIYFDAILANDNQSFSEQWMVQTFERYWSYAEKVVAWTNSLLLPPEP HVVELLAAASQNQSIASIMANNFDDPRSFAPWWFDADQAQAFLASKTAAKVA >gi|333032584|gb|GL891842.1| GENE 6 6434 - 6964 511 176 aa, chain + ## HITS:1 COG:RSc1836 KEGG:ns NR:ns ## COG: RSc1836 COG1853 # Protein_GI_number: 17546555 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Ralstonia solanacearum # 17 165 27 176 183 142 46.0 4e-34 MDTIETLALQAINTENPREIRNLLGQFATGVTVITTRGKDGRKIGMTANSFSSLSLDPPL ILWSLSKTAPSLPDFVEAEYFAIHMLAQEHHQLSGHFARGAEDKFAGIAHQQCNAGVPIL TDALATLVCRNVNQYEGGDHLIFIGQIEQYQQRQGEPLVFHAGKYRIAAEHPELAH >gi|333032584|gb|GL891842.1| GENE 7 7018 - 7965 994 315 aa, chain + ## HITS:1 COG:RSp0231 KEGG:ns NR:ns ## COG: RSp0231 COG4313 # Protein_GI_number: 17548452 # Func_class: C Energy production and conversion # Function: Protein involved in meta-pathway of phenol degradation # Organism: Ralstonia solanacearum # 24 315 25 319 319 263 45.0 3e-70 MKSTLIKHGFLAGTLLGLPWVTHAYDLPTVNLGMTSFLDGGLPAGPGWYAQTYFQNYDSN KLVDAKGQKLGLPKTDLNYQVLVEQISYLSNVRVKDKASLGINFLIPFVSKMDMDDGLNN AAIKAQSGFGDIMIGPFIQFDPVIGAQGPKFVHRFEFQVNLPTGEYNQQKDINPSNNAVS FDPYWAATYWFNPKWTASTRIHYLYNFKNDDPSYAFAGANDMQAGQAIHANFATDYAITE QFRLGLNGYWLKQVTDTEVDGEKVKGRREQVWAIGPGAMYSFSKNDHLVANAYFEQDTEN RPEGTRLQVRYVHHF >gi|333032584|gb|GL891842.1| GENE 8 8025 - 9083 845 352 aa, chain - ## HITS:1 COG:RSc1832 KEGG:ns NR:ns ## COG: RSc1832 COG2207 # Protein_GI_number: 17546551 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Ralstonia solanacearum # 21 337 27 340 342 224 39.0 2e-58 MNQANSHELNGRHFQNESIFTDHNLVFDHHDLSETCRNVGQIFKPHDLKISHQKRDFSAT MHHVKTGALSISRLEYGADVIIEPDHLDNFYLIQIPTQGYAEIEFGSQKFISYSQVASLI SPQQSLRMRWHANSPQLILKVSKDDFTYHCRQHIADSENNLLVFDPKLDFSTQGGAYFLQ LVRTLMDALACDQHPLHHPLAFKQFESNLFNALIYGQPNNALHKIDYYKEKTVSPYFVKR TEAYIKEHLHEPLNVEILAEHAGVSVRTLFTGFKNYLGTTPMSYLKELRFEQAHLELMHN ENLSVTDVAFKWGFTHLGRFSQEYKRRYGELPSSTRRSGQSEGSGIITSIFS >gi|333032584|gb|GL891842.1| GENE 9 9521 - 10549 1041 342 aa, chain - ## HITS:1 COG:PA2514 KEGG:ns NR:ns ## COG: PA2514 COG0543 # Protein_GI_number: 15597710 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pseudomonas aeruginosa # 1 338 1 338 340 438 60.0 1e-123 MGHSVALNFADGKTFFISVNNDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQE YVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETKVTAVELVSET TAILHLDASSHAEQLQFLPGQYARLQIPDTEDWRSYSFANRPNATNQLQFLIRLLPDGVM SNYLRDRCQVGQSLLIEAPLGSFYLREVERPLVFVAGGTGLSAFLGMLDNLVEQPNSPAV QLYYGVNSETDLCEQQRLQAYAEQLPNFSYHPIVTKATETWQGKAGYIHEHLNKDQLAEQ AFDMYLCGPPPMIEAVKNWLDEQALQNYRIYSEKFLQSNTSR >gi|333032584|gb|GL891842.1| GENE 10 10561 - 11052 540 163 aa, chain - ## HITS:1 COG:PA2513 KEGG:ns NR:ns ## COG: PA2513 COG5517 # Protein_GI_number: 15597709 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Small subunit of phenylpropionate dioxygenase # Organism: Pseudomonas aeruginosa # 1 163 1 163 163 194 55.0 4e-50 MSQELHFAVSQFLYKKAELCDAYDWDAYLELYDEDSEYHIPQWIDDHNYVQDPNQGLSYI YYADRTGLEDRVFRIRTGKAASATPLPRTLHSINNIRVKTLEDGLIEAKVAWQTLYNRQG LEGCFYGHATYLLRQTADGFRIRRQHSILLNDKIDSVLDFYHV >gi|333032584|gb|GL891842.1| GENE 11 11055 - 12470 1599 471 aa, chain - ## HITS:1 COG:PA2512 KEGG:ns NR:ns ## COG: PA2512 COG4638 # Protein_GI_number: 15597708 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 2 461 4 463 464 766 74.0 0 MTSSNLKQWNDFIDGCIDFRPNDGVFRIARDMFTEPELFDLEMEFIFEKVWIYACHESEI PNNHDFLTVQIGRQPIIVSRDGKGELHAMVNACEHRGATLTRVAKGNQSTFTCPFHAWCY KSDGRLVKVKAPSEYCEDFDKSSRGLKQGRIASYRGFVFVSLDTQATDSLEDFLGDAKLF LDLMVNQSPTGELEVLQGKSSYTFAGNWKLQNENGLDGYHVSTVHYNYVSTVQHRQQVNA SKGAELDTLDYSKLGAGDSETDDGWFSFKNGHSVLFSDMPNPTVRPGYSTVMPYMVEKYG EKYAEWAMHRLRNLNLYPSLFFMDQISSQLRIVRPVAWNKTEVISQCIGVKGESTEARRN RIRQFEDFFNVSGLGTPDDLVEFREQQKGFQARLERWSDISRGCQSWEYGATKNSQDLGI QPVITGREFTHEGLYVNQHGHWQRLMLDGLNKKALKMQDITFENNAVMDEV >gi|333032584|gb|GL891842.1| GENE 12 12693 - 13043 422 116 aa, chain + ## HITS:1 COG:SMc03199 KEGG:ns NR:ns ## COG: SMc03199 COG2005 # Protein_GI_number: 15966683 # Func_class: R General function prediction only # Function: N-terminal domain of molybdenum-binding protein # Organism: Sinorhizobium meliloti # 3 106 49 152 175 95 45.0 3e-20 MKEQNLKLQIRILLEQNIAFGPGKADLLEAIARTGSISQAAKSMNMSYRRAWQLVDTMNQ CFETALVETQTGGTHGGGAAITALGQKVLQHYRQMENNARQALEHDYQIMSSYLKG >gi|333032584|gb|GL891842.1| GENE 13 13234 - 14019 727 261 aa, chain + ## HITS:1 COG:YPO1145 KEGG:ns NR:ns ## COG: YPO1145 COG0725 # Protein_GI_number: 16121441 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Yersinia pestis # 23 254 21 257 259 222 48.0 4e-58 MVSDTKIKNLAFACSVLSIGLVFNVPAKAESVTVYAAASLTNAINDLEKIYEKQNKVEVK TSYAGSSTLAKQIEAGAPADIFISADTQWMDYLQNKKLVATNDRINLLGNRLVLITPKGQ SLNIKLDKTTDPNRVFTGKICTGDTKSVPVGKYAKQAFTNLGWWSRIEPKLVETEDVRAA LNFVARGECQVGIVYATDAAISKDVKVAGIFPENTHSPIIYPLGLIKKNPNSTKFYQFLQ SNQAKAVFKKYGFSVLAPVKP >gi|333032584|gb|GL891842.1| GENE 14 14088 - 14708 624 206 aa, chain + ## HITS:1 COG:YPO1146 KEGG:ns NR:ns ## COG: YPO1146 COG4149 # Protein_GI_number: 16121442 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, permease component # Organism: Yersinia pestis # 7 205 29 228 231 195 54.0 6e-50 MVSIIPAICVGWFLARKEFWGKSFIETLVFLPLVLPPVVPGYLLLQVFGSRGIIGQYLAP LGIDFAFNWKGAVLASAVMGFPLLVQSIRLAIELVDQRLEMAAKTLGASSLGAFFHVTLP LASSGILIGAILCFCRSLGEFGATITFVGNISNETRTLPLAMYSLMQQPDTEAAIQRLIV LSLSVAFLALWFAQWFHRYQKKRLGR >gi|333032584|gb|GL891842.1| GENE 15 14713 - 15333 225 206 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 22 201 25 207 245 91 30 9e-18 MLIECRFQLHMGQFHIEPSFQSDASVIGLFGASGSGKTSILHAIAGLNTPRSGLIKIQDQ TWFDSNQKINVSTQKRHVGLVFQDAQLFPHKTVKQNLLFGFQHLSQQERQFEADYIIELL KLGHLLQRMPIKLSGGEKQRVALGRALLYSPKLLLLDEPLSALDANHKAEIIPFFQKVKE EIKIPMIYVSHDIQEIKQLTETMWIL >gi|333032584|gb|GL891842.1| GENE 16 15693 - 16463 218 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 2 250 3 238 242 88 26 6e-17 MRSTIVVTGAARGIGAAIAKQLLDQGYHVIGIDCQKNPEQWDISKTMTSDQSSQWQGISQ DITHQQETQTLISELLEKYEITGLVNAAGVLIMRSMLEAKTEDWETLFAVNVMAPIAISQ QVAKHFCAKRRGSIVTISSNSARMPRMQLGMYATTKAALSHFCRNLALEIAPYQVRLNIV SPGSTLTQMQQQLWTDNAPPPAVIDGDLSQYRTGIPLRKLAQPDDIANTVSFLLSDRAAQ ITMQEIVVDGGATLGV >gi|333032584|gb|GL891842.1| GENE 17 16536 - 17177 453 213 aa, chain + ## HITS:1 COG:ECs0634_1 KEGG:ns NR:ns ## COG: ECs0634_1 COG1535 # Protein_GI_number: 15829888 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Escherichia coli O157:H7 # 1 207 1 207 207 227 50.0 1e-59 MSIPKIASYSMPQAHEFTPNKTNWPLHTSRAVLLVHDMQQYFLDFYDLTQEPIPELIQNT KALIDAARQSNIPVVYTAQPGNQSPEYRQLLTDFWGPGLKDEPSITQIFPKISPQKNDTV LTKWRYSVFKFSPLEQLMRDSGRDQLIICGVYAHIGCLMSAAEAFMLNIQPFLCGDALAD FSREEHDMALKYASTRCAQVMTTQQVIQAWIQE >gi|333032584|gb|GL891842.1| GENE 18 17705 - 18106 313 133 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001739 NR:ns ## KEGG: ABBFA_001739 # Name: not_defined # Def: ferric uptake regulation protein (ferric uptake regulator) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 133 1 133 133 223 100.0 2e-57 MTTISKSLLNGLPIKKSRVQVFEILNQNPQGLSAVSIYAQIKNEHKITLGTIYRILSEFE NRKIIKRVFLGKSKSIYKLRKDKMSCNLISLKTSEALNFENEKVKELLHEVTDIIFANTG VDISSVELNLYTE >gi|333032584|gb|GL891842.1| GENE 19 18174 - 19955 1907 593 aa, chain - ## HITS:1 COG:DR0505 KEGG:ns NR:ns ## COG: DR0505 COG0737 # Protein_GI_number: 15805532 # Func_class: F Nucleotide transport and metabolism # Function: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases # Organism: Deinococcus radiodurans # 31 593 18 568 568 346 36.0 8e-95 MTTLNILFKTTSLCLAMALLVGCNDNDDNDSSTPAPRSNQTVNILAFNDFHGNLEPPKRY VEAANPNDASQTVRIPVGGVSYFADAIKKLKAQNPNNAVVSAGDLISASPLTSSLFLDEP TIEVMNDIQIDFNAVGNHEFDRGTDELRRLQNGGCQQYTSTAPCQINKNFSGAKFNFLAA NVAMKNDTSKTIFPAYKVKTYGGIPVAFIGLTLKATPSIVSAVGIKDVEFRDEADTVNAL IPELQKQGIEAIVVVVHEGAAPSTKLNQKTCDGLSGPILGILDRLNPAVDIVVSGHTHQS YICDYATKNPAKPFLLTSAGQYGTLITDIKVELDGKTGDIIKKDAKQIPVQSEAYTSGTT TVSLTDLYQKFSKTPSIEAILDKYRQAVTTISGRVVGTSTAVVSRTQVESGESPLGDMIA DAQQAAALQASNQGSDFTLMNPGGVRADLLINSNNQITFGDIFAVQPFGNSIVTLSLTGK QIRDVLEQQWSGANANSPRILQPSKELSYQYAANTSVSPRASNIMVAGSPLVDTKVYRVT VNSFLADGGDNFTVLKEGQNRVGGGQDIDALESYVAKNSPLIIPATTRIKVIK >gi|333032584|gb|GL891842.1| GENE 20 20354 - 22336 1719 660 aa, chain + ## HITS:1 COG:PA5242 KEGG:ns NR:ns ## COG: PA5242 COG0855 # Protein_GI_number: 15600435 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Pseudomonas aeruginosa # 1 642 67 711 736 808 60.0 0 MLAQAKDIEHPLLERLNFLIIFSRNLDEFFEIRVASLIQKISLMSQATGPEGLPLVEVLK QISKNAHEAVEEQYKILNYTLLPQLQGYGVHFIQHGDILEKHKEWIKEYFFKEVQPVVTP ISLDPAHPFPRLVNKSLNFIVTLEGKDAFGRQIDLAIVPAPRSLPRLVKIPEHISGGAEH YILLSAIIHQHISDLFPGMKATGCHQFRVTRNADLTVSEDVEDLAAALKGELSSRRFGQA VRLEVAKKCPEEIANYLLEQFDLDAEHLYYVDGPVNLARFISNFDLPELRYKPYQQVLPQ LLYTKKPIFDVLKAGDVLLHHPFDSFAPVIKFLREAAQDPNVLAIKQTLYRSGANSEIVQ LLAEAARNGKEVTAVIELRARFDEESNIEVANVLQEAGAVVVYGIVGYKTHAKMILVVRR EQDKIKRYVHLGTGNYHAVNAKIYTDFGLLTNDAEICEDVHKIFQELTGMGKMAKLKKLF HAPFTLHSQLLELIEQEIKNSLAGKKAHIIIKVNALTEPQLISALYKASQAGVKIDLIIR SICCLRPQVAGLSENIRVRSIVGRYLEHTRVYYFYNDGDTKVYCASADWMERNLFSRIET CFPIENKKLKKQVIEDGLNNYLKDNRQAWELQADGTWVQCHPKPEEELYIAQQHLMNLAG >gi|333032584|gb|GL891842.1| GENE 21 22560 - 22634 65 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQWTKPAFTDLRIGFEVTMYFEAR >gi|333032584|gb|GL891842.1| GENE 22 22710 - 23621 1000 303 aa, chain + ## HITS:1 COG:PA1986 KEGG:ns NR:ns ## COG: PA1986 COG1235 # Protein_GI_number: 15597182 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Pseudomonas aeruginosa # 1 303 1 304 304 395 59.0 1e-110 MHIYILGSAAGGGFPQWNCNCPNCHGVRTGTINAKVRTQSSIAISENGVDWILLNASPDI RQQLFDFKAAQPARKLRDTGITNVILMDSQLDHTTGLLTLREGCPMNVWCTEMVYQDLTT GFPVFNMLKHWNGGLQYHQIDPKQAFKINGFENLEFLPLIIQSAAPPYSPHRHDPHEGDN IALIIKDHKTQKQLFYAPGLGKIDDQIMQIMQDSDCVMIDGTLWTDDEMQQTGVGKKTGR EMGHLYISGEGGSLSYLNQLSTPKKVLIHINNTNPILNENSAQFAELKANGVEVAFDGMQ IEL >gi|333032584|gb|GL891842.1| GENE 23 23630 - 24388 822 252 aa, chain + ## HITS:1 COG:PA1987 KEGG:ns NR:ns ## COG: PA1987 COG5424 # Protein_GI_number: 15597183 # Func_class: H Coenzyme transport and metabolism # Function: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C # Organism: Pseudomonas aeruginosa # 7 250 5 248 250 366 73.0 1e-101 MTQTPEALTTEQFKQAIIDKGQYYHIYHPFHVMMYEGKATQQQIQAWVANRYYYQINIPL KDAAIMANCPNQRVRQEWIQRMIDQDGEYPDGGGREAWLRLAEAVGLSREQVISEELVLP GVRFAVDAYVNFARRASWREAASSSLTELFAPQIHQSRLESWPQHYPWIDDKGYEYFRSR LSQARRDVEHGLTITLDSFTTHEQQQRMLEILQFKLDILWSILDALTLAYVHNEAPYHSV TQERVWHKGLFK >gi|333032584|gb|GL891842.1| GENE 24 24385 - 24669 379 94 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001732 NR:ns ## KEGG: ABBFA_001732 # Name: not_defined # Def: pyrroloquinoline quinone biosynthesis protein PqqD # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 94 1 94 94 178 100.0 6e-44 MNKEQFDVNLVPTWRQGYRFQFEPAQNGFVILYPEGMIKLNESAGAIGQYIDGTNNVSAI IAQLKQQFGDIPEIDNDVIDYMLVAQQQHWIDLV >gi|333032584|gb|GL891842.1| GENE 25 24666 - 25820 854 384 aa, chain + ## HITS:1 COG:PA1989 KEGG:ns NR:ns ## COG: PA1989 COG0535 # Protein_GI_number: 15597185 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Pseudomonas aeruginosa # 2 368 9 376 381 541 67.0 1e-154 MTEGVGLPLWLLAELTYRCPLQCPYCSNPLDYAQHKNELTTQEWFDVFDQARQMGAVQLG FSGGEPLVRQDLEQLVAHAHQLGFYTNLITSGMGLTEQRISHLKQAGLDHIQISFQASDP VVNDALAGSKHAFEQKYEMCRLVKKYDYPMVLNFVIHRHNIDQIDKIIELCLELNADTVE LAICQFYGWAFLNRQGLLPTQEQLIRAERITNEYREKLKAQNHPCKLIFVVPDYYEERPK ACMNGWGKIFFTIAPDGMALPCHAARQLPISFPNVREQSLSKIWYESTGFNHFRGDAWMP EGCRSCPDKDRDFGGCRCQAYMLTGDASNADPVCGKSLYHQLIEQARAESEIDSSLGKLV FRNSRNSKQFTVQQNIPVQNIVDD >gi|333032584|gb|GL891842.1| GENE 26 25813 - 26889 864 358 aa, chain + ## HITS:1 COG:mll3679 KEGG:ns NR:ns ## COG: mll3679 COG2355 # Protein_GI_number: 13473171 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent dipeptidase, microsomal dipeptidase homolog # Organism: Mesorhizobium loti # 15 356 8 351 352 315 44.0 6e-86 MISYEKTDMNHGTFPVFDGHNDVLTRLWLSDYNNPAQAFIQEGLAGHLDLKRCQQAGFVG GMFAIFLPPFHYVKQHHPNKLFDQDASDFTQQQIEHICLAQLDLAKQLAEYSNDIQICTT VQDIQHCLTQQKLAIVLHMEGAEALQHNPDLLDVFYDAGLRSIGPLWNRPSRFGHGLNAK FPHSPDTGAGLTNEGKAFIKRCADKKMVIDVSHMNERAFWDTANILQQPIVATHSNVHAL CPQARNLTDNQLKAIKDSKGIVGLNFDVAFLRKDGQRDANTSIEVILEHLEYLIDQMGEN HVGFGSDFDGALISHEIEDVRGLHLLIEAMQKRHYSNEIIEKICFSNWLTVLNRILSK >gi|333032584|gb|GL891842.1| GENE 27 27470 - 27646 192 58 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1876 NR:ns ## KEGG: ABAYE1876 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 58 15 72 72 80 100.0 1e-14 MLKSILVLGTGIAIGMCMYKKKQKNSKSFSTDSDTDSLISKDNNKSKDDNSLDNAVQV >gi|333032584|gb|GL891842.1| GENE 28 27900 - 28136 227 78 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1875 NR:ns ## KEGG: ABAYE1875 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 78 35 112 112 142 100.0 4e-33 MSKRHILKEVNAKSMCGMEIVVEQIFENTLEKNLASAEIEQNWLPLSKIVISDKVINLDQ DNTFAHPRTGKVFKVLNS >gi|333032584|gb|GL891842.1| GENE 29 28304 - 28891 467 195 aa, chain + ## HITS:1 COG:NMB0698 KEGG:ns NR:ns ## COG: NMB0698 COG3663 # Protein_GI_number: 15676596 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Neisseria meningitidis MC58 # 2 194 32 224 229 203 49.0 2e-52 MIIEIETHPLQPFLPENARLLMLGSFPPPRNKWKMDFYYPNFQNDMWRIFGLIFFQDKTY FLSENQKSFNEEAIRNFLIETGIAIFDTAYQIKRLKGNASDKFLEIVTPTDLAVLLKQIP QCHTIMTTGDKATDTLISVLPENTEKPLIGTSTSTYFADRDINLYRLPSSSRAYPLALEK KAEAYQKFFKEIGFL >gi|333032584|gb|GL891842.1| GENE 30 28900 - 30426 964 508 aa, chain - ## HITS:1 COG:STM1148 KEGG:ns NR:ns ## COG: STM1148 COG1502 # Protein_GI_number: 16764504 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Salmonella typhimurium LT2 # 11 508 4 494 494 340 37.0 4e-93 MALSAWGFTDLPSYTDKYDPNEKDIVIKTNNWLNDEAAEEKTQQGLTAFVALDDAFMSIA SRIYLIRNSKETIDLQYYIWTNDFVGNLILHELLKAADRGIKVRLLIDDQNGIKLDGILR SLLQHTNFEIRLFNPYKFRYLRIFDYLFRFKKVNHRMHNKLIIADASIAVTGGRNISSEY FEASSKFQFTDMDILFYGHAVRHAQAVFADFWQSTLSVNATDIIGTCAEHHLKALREHYE QLHHEDHSLTEDKLYDAQSYLKELLEHNPIQWSKAHFVADSPKKILGTATEHEMLYGQVL SIMGKPKQHLELASAYFVPTQQGTYYLKQLRVEGIKVRALTNSFAANDVAIVHAFYSQYR VEMLKNGIELYEFKPVLERRRRTWYEIVTGSVIPAKGKNKSSLHAKFFDVDGKVFIGSFN FDPRSTYLNTEVGLVIESSQLQTQISVMLDQHLPQVAYQLKLNSQGQITWLDYQANGQVI EYDKDPGTSRFQRTMIKAVSYLPIEWMM >gi|333032584|gb|GL891842.1| GENE 31 30892 - 31359 506 155 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01804 NR:ns ## KEGG: ACICU_01804 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 155 1 155 155 291 100.0 5e-78 MPQYLMIAEKVYKKIKEDDLFSDTPTEHLNNLIGVIRKEIKGTKFKLKYNFIDFDECLTK PLDECAVKIDISLMPSHKNKDEYILWLAGFIERMTTGGETHLPPISKFIPPDFKFNYEFD NAKTPAKSTHPDDEGELIINYFKSEAFMKIINEEK >gi|333032584|gb|GL891842.1| GENE 32 32172 - 32537 333 121 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01805 NR:ns ## KEGG: ACICU_01805 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 121 1 121 121 190 100.0 1e-47 MPKYLLLAEKISKNIKQDSSNNYLENLNNLIIEIKKAITGTELKFLYNFLDFGGSLLNLQ DEVLLKFDSSLIPSYKNEEEFILWLADFIDRITIDTSKGDYPIKKNLANLSSIAEKLMYR H >gi|333032584|gb|GL891842.1| GENE 33 32615 - 33778 858 387 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01806 NR:ns ## KEGG: ACICU_01806 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 387 1 387 387 789 100.0 0 MSKLIQPISFKALFIFTPLLFVSIGCSEALYSQTIPSVKSSSENIDYPEIDTALGEKLQP NEEVIAHQITQVIEKSIREQYTAGNALRDAHPKAHGCVRAEFHVLKNIPAQLAKGIFIPD KNYEAWIRFSNASNDASRADIEKDARGMAIKILDVSGQKILENEKEATTQDFIMINHPVF FVNDGQRYLSFMNDLNSHNMIRKLHMPFALGFKGTMNALGARNSKIANPLYARYWSMVPY QLGLGVDRQAVKYSVRNCSTVTAALPDHPSHNFLRDALKDTLQKQDVCMEFLIQPRTSTK MLVEDAMTEWKENEAPFYQVATIHIPKQSFDTPEQNQFCENLSFTPWHALPEHKPLGAIN RMRKIIYENISRVRHDINSAPRQEPKN >gi|333032584|gb|GL891842.1| GENE 34 34106 - 35977 1274 623 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01807 NR:ns ## KEGG: ACICU_01807 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 623 1 623 623 1237 100.0 0 MITNRQNVQNNTNTSPHPITQNTLIDRFSPIYWRIDGPQTTSFAITNYGNGFEASFRSRM TNDLVGISWDSYDTKDHKLLAYETKYSYAGVVWDFDIELSASMPVLNNPSLTPTLTVYYH DNGVDKIAYIVLFNYANNPSSRTAHIHINWDTVKAGFSATDSFPVTNIQRISFSGFTSHY NGQSATPLSQPEDGYIRITNSVVTGTNAKLNLSRVVVPQHNYGICTSYDDHYDLNPQRLV NNMVALGYQGLVNHYCGMSHYPEMTWKSDINKWQIPDTLVTGEAVVNPCARKWHEKYAQA LHNANMQPIFGVSFEMYSLAANEFWAQRDWNSNLGKTGYQPPSYFFSLSDQNALAYLHKV FIEFADTMVAGGCNVNMQIGEPWWWYNTDTNLPCVYDYPTKLAFNADTGLYAPDLGTIYE AMNKTGTPYDEFKTWLRNKLGQTCQNIRAAIKAKYANAQVCPLIFFPSIRSPIQTLATYI NYPSQHYSYPNFDYIMTEAYDWLLEAKLDLAHQAVSQIPTQDLGYPANKVAYLSGFVPDA SIAYIYGFDKNKPYRTPIWQRIFGDMKNNVSLGLMKQFIWAYPQVMFDSITIDTTQAPNG FFVENTLYSPISDNTPYPPDIYL >gi|333032584|gb|GL891842.1| GENE 35 36207 - 37316 1367 369 aa, chain + ## HITS:1 COG:sll0990 KEGG:ns NR:ns ## COG: sll0990 COG1062 # Protein_GI_number: 16329756 # Func_class: C Energy production and conversion # Function: Zn-dependent alcohol dehydrogenases, class III # Organism: Synechocystis # 1 369 1 369 369 668 88.0 0 MKSRAAVAFAPGKPLEIVEVDVAPPKAGEVLIKITHTGVCHTDAFTLSGDDPEGVFPAIL GHEGAGVVVEVGEGVTSVQPGDHVIPLYTAECKECLFCKSGKTNLCVAVRATQGKGVMPD GTTRFSYNGEPIYHYMGCSTFSEYTVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHN TAKVQEGDSVAVFGLGGIGLAVVQGARQAKAGRIIVVDTNPDKFELAKQFGATDFLNPKD YDQPIQQVIVEMTGWGVDHSFECIGNVNVMRSALECAHRGWGQSVIIGVAGAGQEISTRP FQLVTGRKWLGTAFGGVKGRSQLPKMVEDAMKGDIQLEPFVTHTMPLQDINTAFDLMHEG KSIRTVIHF >gi|333032584|gb|GL891842.1| GENE 36 37372 - 38322 666 316 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01809 NR:ns ## KEGG: ACICU_01809 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 316 1 316 316 590 100.0 1e-167 MKKIGIVTVGAVTLCWAMYEVSSDNTNTVTHNEASQKVTFKNFSSTAKNEKLAPQILLAQ TNSLNSAPVCQYNFDATQEDYDLFNTQYPDRPPTMRFPLINGQKFGFKVEPVTEDKYGYL VYTAKSKVKMNSTSYEGDFLLPNKGIIAFEMQLKVPTLSSSTSSYSAEISFNGITDNNYT IRSNYHFDIGVHDFEFGENPPRLYHSVSSEMGDYQFFDNYFKDKKMTDNTNEYQRLGVYI NQDTNQVGFISNGVDEGYQFKLPGALQKIAFTVEGIAYIESTNLFGYEFSNELITDRNAL KFNYPQGTTDMCGNAI >gi|333032584|gb|GL891842.1| GENE 37 38436 - 39452 944 338 aa, chain - ## HITS:1 COG:XF0077 KEGG:ns NR:ns ## COG: XF0077 COG3539 # Protein_GI_number: 15836682 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 23 337 42 355 356 159 34.0 7e-39 MKRILLTGFLFTAGLGVYGEANAYCTLSSGFTTVDISMAVGRVVVRPSDPVGKILRKATF PINPNGSTLRCTSYSDTITAALTQNYPLSPLGNSIYSTNIPGIGIRLYREAENATNFSGY YPYTRSLTPGTTYNLAQGYFVVEIVKTADQTGSGTLVPGLYSRYYVNGHMDRPFLTSTVY GNAITIASSSCEIQGNINKVVQLPTVTKAGFKGVGSTQGDQTFDMNILCNGGINPTGYEE KNLISLTYDFTQDGTNNQVLANTAPTSEKANGVGVQLLWNYQNKNQVIKKGDKLALGTLS SNQTIQYNVPMTARYYQTATNVTAGKVRAMATVTIEYD >gi|333032584|gb|GL891842.1| GENE 38 39449 - 42007 2481 852 aa, chain - ## HITS:1 COG:XF0081 KEGG:ns NR:ns ## COG: XF0081 COG3188 # Protein_GI_number: 15836686 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Xylella fastidiosa 9a5c # 46 852 100 901 901 711 44.0 0 MPKKRQESYKLLKRHICYYLASGVVTMTMPVFVHAEEAAASAPVEAEFDSAFLIGDAQKV DISRFKYGNPVLPGEYNVDVYVNGQWFGKRRMIFKALDPNQNAVTCFTGMNLLEYGVKQE ILTKHAPLQKENNSCYKIEEWVENAFYEFDTSRLRVDISIPQVALQKNAQGYVDPSVWDR GINAGFLSYSGSAYKTFNQSGDRSETTNAFMGVTAGLNLAGWQLRHNGQWQWQDTPAENQ SKSDYQETSTYLQRAFPKYRGVLTLGDSFTNGEVFDSYGYRGIDFSSDDRMLPNSMLGYA PRIRGNAKTNAKVEVRQQGQLIYQTTVAPGNFEINDLYPTGFGGEIEVSVIEANGEIQKF SVPYASVVQMLRPGMNRYSLTVGQFRDQDIDLDPWIIQGKYQQGINNYLTGYTGIQASEN YAAILLGAAVATPIGAIAFDVTHSEAEFEKQASQSGQSFRLSYSKLITPTNTNLTLAAYR YSTENFYKLRDALLIRDLEEKGVNTYAAGRQRSEFQITLNQGLPEGWGNFYVVGSWVDYW NRSESTKQYQIGYSNNYHGLTYGLSAINRKVEYGSNDASHDTEYLMTLSFPINFKKNSVN VNVTASEDSRTVGASGMVGDRFSYGASVSHQDYANPTFNANGRYRTNYATVGGSYSIADS YQQAMVSLSGSVVAHSDGILFGPEQGQTMVLVHAPDAAGAKVNNTVGLSVNKAGYAVVPY VTPYRLNDITLDPQEMSSEVELEETSQRIAPFAGAIAKVDFATKTGYAVYINSKTADGNS LPFAAQVFNQKDEAVGIVAQGSMIYLRTPLAQDRLYVKWGDESNERCSVEYNISNELKNK QQSIVMTEAVCK >gi|333032584|gb|GL891842.1| GENE 39 42065 - 42775 430 236 aa, chain - ## HITS:1 COG:XF0082 KEGG:ns NR:ns ## COG: XF0082 COG3121 # Protein_GI_number: 15836687 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Xylella fastidiosa 9a5c # 4 227 17 254 266 180 44.0 2e-45 MLGLAFASSVAAPAAQAEIVIHGTRVIYPSDAREVTLQVSNNGSKPALVQAWIDEGDPKS TPDQSKVPFMIAPPISRVEATKSQTLRITALPNASQFNQKQETVLWLNVLDIPPRPTSKN ADTTPDNFLQLAIRSRIKFFYRPASIKEDANLAADKLQWVKSGQNLTVKNPTPFHITMTS VYQKVGDKKVDLLPQGLMVKPFSEASIQLKNSNLQDMSFINVNDYGGRVEHQIKLQ Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:43:05 2011 Seq name: gi|333032583|gb|GL891843.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld57, whole genome shotgun sequence Length of sequence - 25314 bp Number of predicted genes - 34, with homology - 33 Number of transcription units - 9, operones - 5 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 345 200 ## gi|332873634|ref|ZP_08441579.1| hypothetical protein HMPREF0022_01185 2 1 Op 2 . - CDS 342 - 674 63 ## gi|332873635|ref|ZP_08441580.1| conserved domain protein 3 1 Op 3 . - CDS 671 - 847 200 ## AB57_2720 hypothetical protein 4 1 Op 4 . - CDS 844 - 1095 101 ## AB57_2721 hypothetical protein 5 1 Op 5 . - CDS 1092 - 1319 248 ## ABSDF1769 hypothetical protein 6 1 Op 6 . - CDS 1316 - 1540 132 ## ABSDF1768 hypothetical protein 7 1 Op 7 . - CDS 1537 - 2832 920 ## COG0305 Replicative DNA helicase 8 1 Op 8 . - CDS 2856 - 3647 536 ## A1S_1584 hypothetical protein 9 1 Op 9 . - CDS 3647 - 3841 159 ## ABAYE2744 hypothetical protein 10 1 Op 10 . - CDS 3856 - 4176 166 ## ACICU_01014 hypothetical protein - Prom 4397 - 4456 4.4 + Prom 3829 - 3888 5.5 11 2 Tu 1 . + CDS 4124 - 4246 128 ## + Prom 4382 - 4441 3.8 12 3 Tu 1 . + CDS 4480 - 5199 503 ## COG2932 Predicted transcriptional regulator + Term 5225 - 5253 1.4 + Prom 5532 - 5591 7.9 13 4 Op 1 . + CDS 5643 - 5894 194 ## gi|332873648|ref|ZP_08441592.1| hypothetical protein HMPREF0022_01198 14 4 Op 2 . + CDS 5887 - 6483 141 ## GM18_2908 HNH endonuclease 15 4 Op 3 . + CDS 6468 - 6860 438 ## AB57_3257 hypothetical protein 16 4 Op 4 . + CDS 6925 - 7137 261 ## gi|332873651|ref|ZP_08441595.1| conserved domain protein 17 4 Op 5 . + CDS 7145 - 7459 316 ## gi|332873652|ref|ZP_08441596.1| hypothetical protein HMPREF0022_01202 18 4 Op 6 . + CDS 7462 - 8340 741 ## ECL_03598 hypothetical protein 19 4 Op 7 . + CDS 8354 - 8665 262 ## gi|332873654|ref|ZP_08441598.1| conserved domain protein 20 4 Op 8 . + CDS 8662 - 9039 167 ## AB57_3261 hypothetical protein 21 4 Op 9 . + CDS 9036 - 9245 204 ## AB57_2740 hypothetical protein 22 4 Op 10 . + CDS 9242 - 9454 379 ## AB57_3263 hypothetical protein 23 4 Op 11 . + CDS 9451 - 9933 437 ## ACICU_02233 putative methyltransferase, putative 24 4 Op 12 . + CDS 9934 - 10203 282 ## gi|332873659|ref|ZP_08441603.1| conserved domain protein + Term 10210 - 10245 -0.7 + Prom 10235 - 10294 5.0 25 5 Tu 1 . + CDS 10318 - 10902 483 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Term 10959 - 10990 1.0 - Term 10932 - 10988 8.2 26 6 Op 1 1/0.000 - CDS 10998 - 13697 2473 ## COG0308 Aminopeptidase N - Term 13719 - 13764 5.1 27 6 Op 2 . - CDS 13777 - 16509 2474 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 16619 - 16678 7.3 + Prom 16596 - 16655 8.6 28 7 Op 1 21/0.000 + CDS 16859 - 17914 1289 ## COG0547 Anthranilate phosphoribosyltransferase 29 7 Op 2 . + CDS 17924 - 18730 1030 ## COG0134 Indole-3-glycerol phosphate synthase 30 7 Op 3 . + CDS 18740 - 19435 740 ## COG2840 Uncharacterized protein conserved in bacteria + Term 19487 - 19520 3.5 31 8 Op 1 7/0.000 - CDS 19446 - 20429 664 ## COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 32 8 Op 2 6/0.000 - CDS 20436 - 22811 2462 ## COG4631 Xanthine dehydrogenase, molybdopterin-binding subunit B 33 8 Op 3 . - CDS 22813 - 24312 1434 ## COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A - Prom 24436 - 24495 4.9 + Prom 24283 - 24342 5.5 34 9 Tu 1 . + CDS 24569 - 25123 572 ## COG0302 GTP cyclohydrolase I + Term 25149 - 25177 1.4 Predicted protein(s) >gi|333032583|gb|GL891843.1| GENE 1 3 - 345 200 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873634|ref|ZP_08441579.1| ## NR: gi|332873634|ref|ZP_08441579.1| hypothetical protein HMPREF0022_01185 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01185 [Acinetobacter baumannii 6014059] # 1 114 1 114 115 230 100.0 3e-59 MKPEQFIREFGVEKARDLLDQLYKLGCPDDMKITVINGMWQRTSNGFTYPDLKRLLESLD LVNCFDDLEQAKSWVSDMDEDLPYVFKGDTYDNRFYKHELVTAIADHESIYGGG >gi|333032583|gb|GL891843.1| GENE 2 342 - 674 63 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873635|ref|ZP_08441580.1| ## NR: gi|332873635|ref|ZP_08441580.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 110 1 110 110 222 100.0 9e-57 MSGLFNVYSASRTGHLIEGLTPFEVLRDMDKKGELVVGGIFYSRGQVRKEGIDKCADLVL MQTDTPKMEFDWSSKYLKVFFFQLESSRPIVITQDLLDAYAIVKHDGEQQ >gi|333032583|gb|GL891843.1| GENE 3 671 - 847 200 58 aa, chain - ## HITS:1 COG:no KEGG:AB57_2720 NR:ns ## KEGG: AB57_2720 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 58 1 58 58 71 89.0 1e-11 MIEFVDYNAMMKLRRDYNLGTRNEETRAAANLYEKLRKLKLLDQLKQEAMTKRYKEAV >gi|333032583|gb|GL891843.1| GENE 4 844 - 1095 101 83 aa, chain - ## HITS:1 COG:no KEGG:AB57_2721 NR:ns ## KEGG: AB57_2721 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 29 83 1 55 55 98 94.0 6e-20 MKAIKRVKAFQNIFDILLFATHATQPFTMKDLHDYVLDAPNNTIQCYVQELIKSGYLEKD SYATYKATQFAKDLLNVKGELKA >gi|333032583|gb|GL891843.1| GENE 5 1092 - 1319 248 75 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1769 NR:ns ## KEGG: ABSDF1769 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 61 8 68 83 119 96.0 5e-26 MRLANDKKTLDWIEEIGGEQYEAKFTHGTVYGYNKFKCRCEFCKEAKALSNQRAALKRAV KANPPQSVLIVGGAA >gi|333032583|gb|GL891843.1| GENE 6 1316 - 1540 132 74 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1768 NR:ns ## KEGG: ABSDF1768 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 74 1 74 76 134 98.0 1e-30 MSVQVQVTSINRQKMQFNVEAIDGSRVILKRAFNFKTETKKHIESVINKELKTFNKPSYG GIEIVFMCPVGVFS >gi|333032583|gb|GL891843.1| GENE 7 1537 - 2832 920 431 aa, chain - ## HITS:1 COG:PM0412 KEGG:ns NR:ns ## COG: PM0412 COG0305 # Protein_GI_number: 15602277 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Pasteurella multocida # 2 426 26 460 467 198 32.0 2e-50 MEQAVLTALMTVDNSFDVVSNDLDVECFFPERHKQIFQAIADLANENKPYDFVMVEQQLK QKNVIHLMGGSEYLLQMSSEAPSSFYNLESYVAELNKFKAHREVEHIGQSIAEIAKDLTI PDVHIAAESILDGKKTSNDVEKTSFTFEEAMNRATDRLIQKAEAKANKQYTGVKFNLTHL DNLVGLIQKGHFCIVGGRPGSGKSTLAQMLVIQTTVQYREPVLFVSAEMDVETFTNRCIS ALTQIPYENIHNAELFDGMLAKFAEAQKRFSSLPIHIEDKQKPTIAEIHSWARKAKRKYK KLGCIVIDYLQLVRDPSKKDRYQEVSSISRDLKALAKEFDCPVIALAQLNRESEKGKRPK ASDLKESGQIEQDADQIILANPIIGEDDLPSGVTELIVAKNRHGKKGVVRVKDRLDICRF VTIREEERGAA >gi|333032583|gb|GL891843.1| GENE 8 2856 - 3647 536 263 aa, chain - ## HITS:1 COG:no KEGG:A1S_1584 NR:ns ## KEGG: A1S_1584 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 105 263 107 265 265 120 40.0 6e-26 MNTAFNLEQFLKQATPVEDKYTRTPNYLVDKGYVSEMTGSALKCYVVINRFTDGFCRSNW SITSSFLQEKTGIKKLKTLTDSVRQLEQLGLVLVVRSTGETNKFSIIHPEFEPPAKMDGS AENGMDTTPENGMGSTHQNGGETTPENGTTKKETNKKENIKKDICEIFEFWKVVFNKNEK TLLSDKRARKIQARLVDGYQVEDIKLAITNCSKSDYHVQGRYTDIELICREPEKLDRFIN MFPKAEQIMAPVPGSYEVDMGDW >gi|333032583|gb|GL891843.1| GENE 9 3647 - 3841 159 64 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2744 NR:ns ## KEGG: ABAYE2744 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 13 64 1 52 52 65 92.0 8e-10 MDQAQCSIGANQMNYSILAETELNQKISLFQKAVEAYVLNRTLENSMALAKAKAELAAFV LRGV >gi|333032583|gb|GL891843.1| GENE 10 3856 - 4176 166 106 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01014 NR:ns ## KEGG: ACICU_01014 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 106 103 53.0 3e-21 MSKVSIEMSASARNARSMILQKLAVLNNGDIAEELGLDATVFSKIKNERKNNGLTELEMF CELLNLIGLKIVDADDVYCSKETAEATRELLKNCFNSPEFMRILFK >gi|333032583|gb|GL891843.1| GENE 11 4124 - 4246 128 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDRAFLALADISIDTLLMVIPMQRYDFEYLGLKKCVGTAI >gi|333032583|gb|GL891843.1| GENE 12 4480 - 5199 503 239 aa, chain + ## HITS:1 COG:PA0611 KEGG:ns NR:ns ## COG: PA0611 COG2932 # Protein_GI_number: 15595808 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pseudomonas aeruginosa # 21 232 30 241 256 165 41.0 7e-41 MEILDTVMKQEKPTHPSVLRLLEASGMSQEETAKAIDEFPQTITNWKKRGVSKAGALKAA AKFGVAANWILTGEGKKEESNITKVVEWDTDTPLDNDEVEIPFYKEVLVSCGSGSLAEMV GNETRKLRLSKATLRQYGVDPSNAYALTAFGNSMSPVINNGATVYVDVGRTSIVDGKIYA INHGGLFKFKYLYRLPKGGVKIVSENKEEYPDEYLTAEDIMEQEFCVVAYAFNVQNSLP >gi|333032583|gb|GL891843.1| GENE 13 5643 - 5894 194 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873648|ref|ZP_08441592.1| ## NR: gi|332873648|ref|ZP_08441592.1| hypothetical protein HMPREF0022_01198 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01198 [Acinetobacter baumannii 6014059] # 1 83 1 83 83 158 100.0 1e-37 MSHFKPGQLAVLANDDQKSNIGKVVSLVRWHESKQDTSGNTHHDVWDVDCNDGLETSTGN YSYTNVFVYAKDLQPLAKEPSHG >gi|333032583|gb|GL891843.1| GENE 14 5887 - 6483 141 198 aa, chain + ## HITS:1 COG:no KEGG:GM18_2908 NR:ns ## KEGG: GM18_2908 # Name: not_defined # Def: HNH endonuclease # Organism: Geobacter_M18 # Pathway: not_defined # 18 136 9 130 171 87 43.0 3e-16 MDNYKIKVCRNRGVVKTRFVEGFGKNYIVSNLGQVFSVARSGNWKLKQLKPNVNHKGYSR VTLKNGGECKTLSLHRVVAHAFIENHLGKTQVNHINGIKSDNDVANLEWCTPKENIHHAL KTGLTKVSSGEKKSQLTNEDVLQIVSRYHNGEMLREISKDYPVSEQTLSSIVNGKSWSSV TGIQHSYIGKGVKRCQMN >gi|333032583|gb|GL891843.1| GENE 15 6468 - 6860 438 130 aa, chain + ## HITS:1 COG:no KEGG:AB57_3257 NR:ns ## KEGG: AB57_3257 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 6 130 128 253 253 92 43.0 4e-18 MSNELKDPALISSAEAKLAWANGVDIQIKNVNCVNWYDLDESKYNLDIFDNVRVDFRLKP QTIKLELEIPAPFQPKEGEECCYISDESIDGYHTVSYNSERYSGMIFGLYRPSDIEKVVA LFRSAFGGAS >gi|333032583|gb|GL891843.1| GENE 16 6925 - 7137 261 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873651|ref|ZP_08441595.1| ## NR: gi|332873651|ref|ZP_08441595.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 70 1 70 70 128 100.0 2e-28 MNMLANISFDAATESKLLKDLSKHPELLAGAVEYAFQCGDIDSKEYRNWQSKIAEMERLH TANLLATIKA >gi|333032583|gb|GL891843.1| GENE 17 7145 - 7459 316 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873652|ref|ZP_08441596.1| ## NR: gi|332873652|ref|ZP_08441596.1| hypothetical protein HMPREF0022_01202 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01202 [Acinetobacter baumannii 6014059] # 1 104 1 104 104 202 100.0 6e-51 MGFFFNTEFLEQFGFSVGEEDEATHYSTFGGSDWKLKANKDQMFYWDALSKSWKRWALTL EHCTPIGEKEPNYKCGPVNQVVVKKDETTRELSPIYSNSKYKGD >gi|333032583|gb|GL891843.1| GENE 18 7462 - 8340 741 292 aa, chain + ## HITS:1 COG:no KEGG:ECL_03598 NR:ns ## KEGG: ECL_03598 # Name: not_defined # Def: hypothetical protein # Organism: E.cloacae # Pathway: not_defined # 11 245 3 243 290 253 57.0 9e-66 MNMQSKEQFSFTKAERKKAKLKLNLNGASGSGKTYSALVLASSLGKKIAVIDTENESASL YANEFNFDTLPLKPPYSPERFAGAIHAAYNMGYEVLIIDSASHEWIGTGGCLEINDEAAK RFKGNTWSAWSETTPRHRKFIDAILQTDMHIITTTRAKTETVQGEKGKVIKLGMKAEQRE GYEYELTVSLDMLHENKFAIPTKDRTKLFNPTGEVITKETGEKLIAWLNDGRSQEEALQA AFDEAIKRINATTDVAELGIIYSQFKGTDCEAEIVSACSSRKHSLIGTQGNA >gi|333032583|gb|GL891843.1| GENE 19 8354 - 8665 262 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873654|ref|ZP_08441598.1| ## NR: gi|332873654|ref|ZP_08441598.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 103 2 104 104 193 100.0 3e-48 MEIKETRIYRIPSQNNIDPIDLFVTWYGEHRSQVVIRCWDKAWTAYWGGHWVEEVERFLL MDNIEYLVTSLARTRAHQERNWLKNIIKSIQQYLKAQGFEVAA >gi|333032583|gb|GL891843.1| GENE 20 8662 - 9039 167 125 aa, chain + ## HITS:1 COG:no KEGG:AB57_3261 NR:ns ## KEGG: AB57_3261 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 81 1 81 202 146 90.0 3e-34 MTDLNKEREAFLNTFQYYKGRRDIIFSHEHELFMTRSNNPSEIAQKEISNMNSRWDAWLR CAKHRDAELEKAKAKVVPEGYVLMPKVPSEKMFQAYERYSVAPMSTLSKTGYKAMVEASE SGAEQ >gi|333032583|gb|GL891843.1| GENE 21 9036 - 9245 204 69 aa, chain + ## HITS:1 COG:no KEGG:AB57_2740 NR:ns ## KEGG: AB57_2740 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 69 1 69 69 117 91.0 2e-25 MSITLNGHQLKSLLEFVNPDGEKDLDQLDTELTIKFFEVGHSGKGYYFWMTEYPEEGAMK LDIESGAEG >gi|333032583|gb|GL891843.1| GENE 22 9242 - 9454 379 70 aa, chain + ## HITS:1 COG:no KEGG:AB57_3263 NR:ns ## KEGG: AB57_3263 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 70 1 70 70 73 57.0 3e-12 MSEKAFKDLKIRFHLAIGVANGDREDFGKLSDWIEEENWEMMDEEEQKDTLSEIAEEWAQ QYLDLGATVE >gi|333032583|gb|GL891843.1| GENE 23 9451 - 9933 437 160 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02233 NR:ns ## KEGG: ACICU_02233 # Name: not_defined # Def: putative methyltransferase, putative # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 160 311 89.0 8e-84 MNAQILDPCCGSKMMWFDRQNPNVVYGDIRKEEHTLCDGRSLVIEPDVMMDFRNMPFNDG QFTLVVFDPPHLVKAGKQSWLAAKYGKLSEDWREDIRKGFAECFRVLANGGVLIFKWNET QIKVSEVLALTDQKPLFGHISGKRSNTHWITFMKAESKEE >gi|333032583|gb|GL891843.1| GENE 24 9934 - 10203 282 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873659|ref|ZP_08441603.1| ## NR: gi|332873659|ref|ZP_08441603.1| conserved domain protein [Acinetobacter baumannii 6014059] Hypothetical protein ABK1_2668 [Acinetobacter baumannii 1656-2] hypothetical protein ABTW07_2802 [Acinetobacter baumannii TCDC-AB0715] conserved domain protein [Acinetobacter baumannii 6014059] # 1 89 1 89 89 150 100.0 2e-35 MGQIVKIEASILEKIVAVAERIAQSKEERRVGREEFAHMLNIEPETLDARIREGRYQRPY KDGRKSFWLLSYVQSVVTDTKESGKVATY >gi|333032583|gb|GL891843.1| GENE 25 10318 - 10902 483 194 aa, chain + ## HITS:1 COG:PA0649 KEGG:ns NR:ns ## COG: PA0649 COG0512 # Protein_GI_number: 15595846 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Pseudomonas aeruginosa # 1 190 1 190 201 289 66.0 2e-78 MLLMIDNYDSFTYNIVQYFGELNQEVKVVRNDQVTLEDIERWQPKYLVIGPGPCSPSEAG ISIPAINHFAGKIPLLGVCLGHQSIGQAFGGKIVRAKTVMHGRLSDMYHSNKGIFSNLPS PFSATRYHSLVIDQETLPDCLEVTCWTNEADGSMEEIMGVKHKTLPVEGVQFHPESILSQ HGHQIFKNFLDIYA >gi|333032583|gb|GL891843.1| GENE 26 10998 - 13697 2473 899 aa, chain - ## HITS:1 COG:SPBC1921.05 KEGG:ns NR:ns ## COG: SPBC1921.05 COG0308 # Protein_GI_number: 19112790 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Schizosaccharomyces pombe # 38 898 20 877 882 289 27.0 1e-77 MLVKPSFKKRLLLTTLLSLSATQIFASNNSEQIPIGKLPEWVVPESYDLDFKIDPAQKGY TGKTTIHLKLAQATDHIWIHGKSLTVKDVNITSAEGVKTKAKYEQASEIDGVSKIKFAKT LPAGQYQLVLDFNAAYDQQLDGIYKIEFEGKPYVMTQMEAISARQSFPSFDEPRFKTPFN IRLTIPSKYSGFANTQQTSEQIEKSGWKTLSFAQTKPLPTYLLALAVGPWQLQKGPDIGA TSWRKQPIQLRGIAPDTKAEKMQQALSETPAILKTLEDYFAFGYPFDKLDLLAAPDFAAG AMENPGLITFRDYLMLLDKDSPVFFVQNSFNVNAHELAHQWFGDVVTMPWWDDLWLNESF ATWMQSKITQKLHPEFNADLERITDTADAMKSDSLVSVRRIRQPILSNADIQTAFDGITY QKGAAVLNMFESYLGEEKFKQGVRNYINKHQYGNATANDLISALAEQSGQGERFTRAMKS FLDQPGVPLINTALQQEGNKVFLNVKQSRYLPVGSKGDARSLWGVPLCVRYEVPNAGSKV QCELVDQAEAKIELKGASLGSWYIPNADAAGYYQFSLPQKEFTRLTAATEKLSNTEQLAY AYAISAAFNHGDINLLAVVDAAKKFANSNSRQISTALFSQLSTIHRHVLKTEAERERFRK VLANLYLPKLNQLGYVSKTDESAEDSLWRSELVRFLALDIQVPEVRTQLLKQSDALFAQK QLNFAQVTPELLPTILAVRVQEKGQPAFDRLSGELQRVTQPTQRLAILTALGSANQEATR QQARQLILNPRVKVGEVRTVVNSINSYGDEQGGLWSWFKVNHDAVFDRLGKSSAGRFPAM FSGAACTQQQAAQLNDFFAPRTKELVGVERGLKQTKERIQLCESLVAKQDGSIVQQLKL >gi|333032583|gb|GL891843.1| GENE 27 13777 - 16509 2474 910 aa, chain - ## HITS:1 COG:PA2057 KEGG:ns NR:ns ## COG: PA2057 COG1629 # Protein_GI_number: 15597253 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 54 910 2 844 846 720 44.0 0 MYLNKLKYVGALKNKRSFIFVFVALFHPLESYAQETVEQTQNQAKPDKVVRVAVTGSRIS KAQKDGPTSVTVITAADIEKQGFSNAFDALNNLTQNTGFVQGADYGNTFTPAANAISLRG LGPNHTLTLINGHRVADYPVPYDGSVNFVNLANIPTAIIDRIEILNGGASAIYGSDAIAG VVNIILKKKTDGTQFNIKAGGTKEGGENLRLQLSGSKTLDKLSLVYGIELSGREPIWAAD RDFMKSRTRLGEKPDTIVGRKNADTGKYLSIGGCQAFNGLFNGSVNNIGQAGADNCASGL ARPTYWTVQTQNRSQNGYLGLDYELNDKTQLFADFLIGANQIENNTRSPIWTSLAATSGY FLNQDSGNYEIWNRRFAPEELGGVERINKKWKEISSNLNFGIRGDIGETSWSYEAVYNGS IYTSQLNRQGLLRSNVDEYFLGQQLGTDADGIPIYSPHLDRLSRPLTASEFESISGTTKE KDKSWAQSLTLSANGDVFKLPAGTAKLATVAEIGRQGFSIKPDEAIENGEFYNTSSSGEY SGTRTRQALGAELFLPLAKPLNLTLSGRYDRYALSDNSIDKLTFGSGLEFRPHPTLLVRG NYATSFRAPDMNYLFLNKQKGYFASTTDYLRCSQTGQPLDKCSFKDYAPGANYTLTGNKE LKPEEGKSYGAGFVWSPTNKFDISVDYWDIKIDNLVTNLSADKILRLEADCRLGNQDINS AACIDALARVERNPANAVVDPNVIKNINIVPINAASDHTRGIDFTSRWRWKTDSFGNFLW TINYSRVLEHEYQQSKDHEKDDYLKDLSSLDWRDRFNTSLSWSFGDWASTVLVNRYGKIP NGNQTAYLSPTYLVNWSGTYQISPKASASIIINNLFDKVKRDDTGGWPYYPIGSYSPFGR QGWLEFNYKF >gi|333032583|gb|GL891843.1| GENE 28 16859 - 17914 1289 351 aa, chain + ## HITS:1 COG:PA0650 KEGG:ns NR:ns ## COG: PA0650 COG0547 # Protein_GI_number: 15595847 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Pseudomonas aeruginosa # 3 350 1 348 349 380 57.0 1e-105 MTMNIQQALNHITKNIHLTQPQMEEIMRSIMQGEATEAQIGALMMGLRMKGESIDEMTAA ARVMREFAIKIDVSDIKHLVDIVGTGGDGQNLFNVSTASSFVIAAAGATIAKHGNRGVSS KSGSSDLLEQAGIHLDLDMQQTERCIREMGVGFLFAPNHHKAMKYAAGPRRELGIRSIFN LLGPLTNPAGVKRFVIGVFSDELCRPIAEVMKQLGAEHVMVVHSKDGLDEISLAAPTTIA ELKDGEITEWTLNPEDVGIESQTLNGLVVADATASLKLIKDALSKNKSDIGEKAANMIAL NAGAGIYVAGITKTYAQAVAFAQDIIYGGQALEKMSVLAEFTKTLKQSQAD >gi|333032583|gb|GL891843.1| GENE 29 17924 - 18730 1030 268 aa, chain + ## HITS:1 COG:PA0651 KEGG:ns NR:ns ## COG: PA0651 COG0134 # Protein_GI_number: 15595848 # Func_class: E Amino acid transport and metabolism # Function: Indole-3-glycerol phosphate synthase # Organism: Pseudomonas aeruginosa # 7 264 5 266 278 268 56.0 7e-72 MINIQNTILGKIVDRKHEELAARLKQRNLQDVEELAKAATPVRGFANALQHKRPGVIAEI KKASPSKGIIRADFNPAEIAEQYEQAGAACLSVLTDVDFFQGADENIAIARNHCALPALR KDFLVDPYNVVEARALHADCILLIVACLSDQQLEEMSKTAFEHQLDVLVEVHDEEELERA LKLSEQCLLGVNNRNLKTFDVDLNTTIRLKKLLPASRLLITESGIATPDDVRMMQEHDIH SFLVGESFMKQPRPDQAFTALFGQPQTV >gi|333032583|gb|GL891843.1| GENE 30 18740 - 19435 740 231 aa, chain + ## HITS:1 COG:XF1295 KEGG:ns NR:ns ## COG: XF1295 COG2840 # Protein_GI_number: 15837896 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 48 218 9 177 180 91 34.0 2e-18 MSNKDSSLSKEQQKLLKQFKKQISNPHSSKIANQPESKKSQAESEELEDTHLFKQAVAGV KPINNSNIADVKTPRAKKVDAQTLAKRAAAEGGRDTEHAELSDTQAALNPVASQATLSYR IATLQHKVFEDLKAGKMRWFEAVDLHGCTIEQARDAVLQIIQMAKDENQNVIKIVHGKGP EAVLKTYVNGWLRQHRDVLAFVSAPENQGGTGAVLVLLKRAEKNPKFEQKK >gi|333032583|gb|GL891843.1| GENE 31 19446 - 20429 664 327 aa, chain - ## HITS:1 COG:RSc2097 KEGG:ns NR:ns ## COG: RSc2097 COG1975 # Protein_GI_number: 17546816 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family # Organism: Ralstonia solanacearum # 1 327 1 322 342 192 38.0 7e-49 MQHLQWWTDFVAWQADALPMVLVTVVRADGSTPREVGATMLLRFNLQQQWQQSDTIGGGH LEFQAIDIAKAMLKESETCVRRIERFNLSARLGQCCGGVMWLLFEKILPAEIASDLSGSL QAWRAGKHIWRNASYQYASTWQTMDMEQQPSFEFHSGSSEEWQFSQQIQPNTMQVLICGA GHVAEAIVRCLLPIGVRVKWIDPRDDIFPSDLLEQAYCITTDTLDAEIEHFDRSGAVLIL THDHQLDLQLCFTALKPTAKPFAYVGMIGSKSKRAIFEKRMQVRGYTSETLQRLVCPIGI EGISSKQPAMIAIAVVAQLLQVFDVKK >gi|333032583|gb|GL891843.1| GENE 32 20436 - 22811 2462 791 aa, chain - ## HITS:1 COG:RSc2096 KEGG:ns NR:ns ## COG: RSc2096 COG4631 # Protein_GI_number: 17546815 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine dehydrogenase, molybdopterin-binding subunit B # Organism: Ralstonia solanacearum # 17 785 28 792 792 823 56.0 0 MNQTIDLNISKKSAKAGDSIPHESAHLHVTGQATYIDDLPELENTMHLAVGFSNCAKGKI SKFDLDAVRQADGVHAVFSAKDIEVENNWGPIVKDDPIFAEEQVEFYGQALFVVVAESYQ QARQAVRLAKIEYVPETPILTIQDAIKKESWVLPPVEFSHGEVEQAFQNAAHQLSGAIEL GGQEHFYLEGQISYAIPQENQSLKVYCSTQHPTEMQLLICHALGMNMHQVSVESRRMGGG FGGKESQSAQWACIASLAAKKTGRPCKLRLDRDDDMSATGKRHGFAYEWSVAFDDTGILQ GLKVQLASNCGFSADLSGPVNERAICHIGNAYYLNAVELRNLRCKTNTVSNTAYRGFGGP QGMFVIENIIDDIARYLGCDPVEIRQRNFFAEQPGGGRDRMHYGAEVRDNVAPKLVAELL QSSDYAKRRQTIHAFNQNNDIIKRGIALTPLMFGISFNAVHYNQAGALVYVYMDGTVAIT HGGTEMGQGLYTKVRQVAAHELGLPIDSVRLIATDTSRVPNTSATAASSGADLNGKAVQN ACIKIRERLAKLAAEISQSEADQVQFEDSMVSTANGHSWTFPDLVQRAYMARVQLWDSGF YKTPEIHYDQVNHLGRPFFYYAYGAAVSEVAIDTLTGEMKVLRADILHDVGQSINPAIDI GQIEGGFVQGMGWLTTEELYWQPQGPHAGRLFTHAPSTYKIPTSVDIPHIFNVKLFNNQN QADTIYRSKAVGEPPFMLALSVFSAIRQAVQAAIPENAPLVLNAPATPEEILRAIAIGRG QALAARPQAKM >gi|333032583|gb|GL891843.1| GENE 33 22813 - 24312 1434 499 aa, chain - ## HITS:1 COG:RSc2095 KEGG:ns NR:ns ## COG: RSc2095 COG4630 # Protein_GI_number: 17546814 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A # Organism: Ralstonia solanacearum # 1 480 14 491 516 483 52.0 1e-136 MLERPITFFFRGGQQQVENIVPTMTVLQFLREYTQTGKTRQTGTKEGCAEGDCGACTVVI GELVNDNLQLRSVNACIQFLPTLDGKALFTVEDLHSLLPVQDGTLHPVQQAMVDIHGSQC GFCTPGFIMSLWSMYENEQQSLSKDKISDYLSGNLCRCTGYRPILDAAQKAYDYPRVVLE RQKVIDVLKEIRTLPALYLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTK QGRDLGDMLYIGQVEELKKIVVTDLALTIGANVSLSDALIKISDFYPDFQELQRRFASMP IKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGKQTREIALEDFYLDYQKTALQLGE FVEAIVIPLREGQTRFKFASYKIAKRFEQDISAVCAAISCELDNDDVTHNVRIAFGGMAA IPKRAKYAEAILEGQQITAELIVQAQQALSQDYQPLDDGRASSAYRLHVAKNCLKRFYLE KILSQTLTRVNDLIAMVEI >gi|333032583|gb|GL891843.1| GENE 34 24569 - 25123 572 184 aa, chain + ## HITS:1 COG:PA1674 KEGG:ns NR:ns ## COG: PA1674 COG0302 # Protein_GI_number: 15596871 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Pseudomonas aeruginosa # 1 180 1 180 181 239 65.0 2e-63 MSMQQSYANILTAVGEDLNRPGLKDTPVRAAKAFSYLTSGYSKTLEEVTNNAVFPSDNHE MVLVKNIEFYSLCEHHLLPFYGRVHVAYLPEGKVLGLSKFARITEMFARRLQIQENLTQQ IAEAVAEVTGARGVAVVIDSAHMCMMMRGVGKQESTTRTVSFVGDFKTDKEARREFLSAV PESY Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:44:53 2011 Seq name: gi|333032582|gb|GL891844.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld58, whole genome shotgun sequence Length of sequence - 74640 bp Number of predicted genes - 72, with homology - 69 Number of transcription units - 41, operones - 15 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 14 - 235 382 ## + Term 257 - 285 -1.0 + Prom 288 - 347 3.4 2 2 Tu 1 . + CDS 370 - 1374 1205 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Prom 1420 - 1479 4.1 3 3 Tu 1 . + CDS 1521 - 2084 272 ## COG2072 Predicted flavoprotein involved in K+ transport + Term 2146 - 2191 1.1 - Term 1961 - 1996 -1.0 4 4 Op 1 . - CDS 2118 - 2582 427 ## ACICU_02361 hypothetical protein 5 4 Op 2 6/0.100 - CDS 2579 - 3826 853 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 6 4 Op 3 . - CDS 3826 - 5655 1519 ## COG0726 Predicted xylanase/chitin deacetylase 7 4 Op 4 . - CDS 5655 - 8057 1924 ## ABAYE1394 biofilm synthesis protein 8 4 Op 5 . - CDS 8026 - 8187 79 ## - Prom 8383 - 8442 8.9 - Term 8404 - 8456 5.3 9 5 Tu 1 . - CDS 8479 - 9315 901 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 9363 - 9422 3.5 + Prom 9269 - 9328 7.9 10 6 Op 1 . + CDS 9471 - 11849 3092 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 11857 - 11902 6.2 11 6 Op 2 . + CDS 11914 - 12669 803 ## ABBFA_001299 RDD family protein + Term 12695 - 12751 3.9 + Prom 12738 - 12797 7.5 12 7 Op 1 25/0.000 + CDS 12986 - 14038 1030 ## COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 13 7 Op 2 20/0.000 + CDS 14042 - 16033 2089 ## COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 14 7 Op 3 16/0.000 + CDS 16038 - 16658 375 ## COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 15 7 Op 4 7/0.100 + CDS 16658 - 16987 233 ## COG3125 Heme/copper-type cytochrome/quinol oxidase, subunit 4 16 7 Op 5 . + CDS 16998 - 17876 519 ## COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) + Term 18016 - 18048 1.7 + Prom 17908 - 17967 7.3 17 8 Op 1 11/0.100 + CDS 18061 - 18444 645 ## PROTEIN SUPPORTED gi|169633238|ref|YP_001706974.1| 30S ribosomal protein S6 18 8 Op 2 27/0.000 + CDS 18456 - 18683 389 ## PROTEIN SUPPORTED gi|126642217|ref|YP_001085201.1| 30S ribosomal protein S18 19 8 Op 3 16/0.000 + CDS 18692 - 19138 716 ## PROTEIN SUPPORTED gi|126642218|ref|YP_001085202.1| 50S ribosomal protein L9 + Term 19146 - 19195 11.2 + Prom 19164 - 19223 6.8 20 9 Op 1 9/0.100 + CDS 19339 - 20784 1603 ## COG0305 Replicative DNA helicase 21 9 Op 2 . + CDS 20817 - 21887 1074 ## COG0787 Alanine racemase + Term 21890 - 21947 3.0 - Term 21879 - 21933 4.5 22 10 Op 1 3/0.200 - CDS 21940 - 22674 641 ## COG3484 Predicted proteasome-type protease 23 10 Op 2 . - CDS 22691 - 23470 396 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 24 10 Op 3 . - CDS 23473 - 24069 511 ## ACICU_02381 hypothetical protein 25 10 Op 4 . - CDS 24092 - 25642 1450 ## COG2308 Uncharacterized conserved protein - Prom 25758 - 25817 6.4 + Prom 25776 - 25835 6.1 26 11 Tu 1 . + CDS 25868 - 26875 1015 ## ACICU_02383 transcriptional factor + Term 26893 - 26922 1.4 - Term 27205 - 27248 10.3 27 12 Tu 1 . - CDS 27262 - 29142 2320 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division - Prom 29169 - 29228 7.7 + Prom 29265 - 29324 6.3 28 13 Tu 1 . + CDS 29375 - 29605 208 ## ABBFA_001281 hypothetical protein + Term 29676 - 29708 3.1 + Prom 29678 - 29737 7.8 29 14 Op 1 . + CDS 29762 - 30667 1570 ## PROTEIN SUPPORTED gi|169795493|ref|YP_001713286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) 30 14 Op 2 . + CDS 30681 - 31523 517 ## ABBFA_001279 MJ0042 family finger-like domain protein + Term 31715 - 31760 1.4 + Prom 31730 - 31789 5.3 31 15 Tu 1 2/0.300 + CDS 31900 - 32169 297 ## COG2901 Factor for inversion stimulation Fis, transcriptional activator + Term 32172 - 32215 3.1 + Prom 32175 - 32234 4.1 32 16 Op 1 17/0.000 + CDS 32259 - 33833 1949 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) + Term 33855 - 33887 1.5 + Prom 33835 - 33894 3.0 33 16 Op 2 . + CDS 33959 - 35245 1699 ## COG0151 Phosphoribosylamine-glycine ligase + Term 35258 - 35299 8.3 + Prom 35274 - 35333 9.6 34 17 Op 1 10/0.100 + CDS 35494 - 36360 1004 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 36381 - 36421 9.2 35 17 Op 2 32/0.000 + CDS 36436 - 37461 1000 ## COG1135 ABC-type metal ion transport system, ATPase component 36 17 Op 3 . + CDS 37458 - 38153 920 ## COG2011 ABC-type metal ion transport system, permease component + Term 38170 - 38199 0.4 + Prom 38177 - 38236 5.1 37 18 Tu 1 . + CDS 38311 - 39042 756 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 39063 - 39103 3.1 + Prom 39139 - 39198 15.2 38 19 Tu 1 . + CDS 39399 - 39602 292 ## ABBFA_001271 hypothetical protein - Term 39762 - 39815 3.2 39 20 Tu 1 . - CDS 39838 - 41136 1296 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 41166 - 41225 10.2 40 21 Tu 1 . - CDS 41565 - 42131 453 ## ACICU_02397 TetR family transcriptional regulator - Prom 42151 - 42210 8.3 + Prom 42182 - 42241 5.3 41 22 Tu 1 . + CDS 42353 - 43471 826 ## COG0477 Permeases of the major facilitator superfamily + Term 43472 - 43527 6.6 - Term 43461 - 43511 11.4 42 23 Op 1 . - CDS 43529 - 43981 518 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 43 23 Op 2 . - CDS 44009 - 45376 1480 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 45586 - 45645 5.6 + Prom 45621 - 45680 7.1 44 24 Tu 1 . + CDS 45727 - 46638 723 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 45 25 Tu 1 . - CDS 46653 - 47381 729 ## COG1794 Aspartate racemase - Prom 47507 - 47566 6.7 - Term 47508 - 47541 3.1 46 26 Op 1 8/0.100 - CDS 47574 - 48197 427 ## COG3009 Uncharacterized protein conserved in bacteria - Term 48204 - 48259 3.4 47 26 Op 2 11/0.100 - CDS 48274 - 49935 1561 ## COG3008 Paraquat-inducible protein B 48 26 Op 3 1/0.300 - CDS 49949 - 50755 396 ## COG2995 Uncharacterized paraquat-inducible protein A 49 26 Op 4 . - CDS 50743 - 51360 288 ## COG2995 Uncharacterized paraquat-inducible protein A - Prom 51420 - 51479 8.8 + Prom 52259 - 52318 6.9 50 27 Op 1 . + CDS 52362 - 54047 1796 ## COG2985 Predicted permease 51 27 Op 2 . + CDS 54104 - 55702 1795 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 55708 - 55755 3.0 - Term 55686 - 55748 7.1 52 28 Tu 1 . - CDS 55753 - 56655 661 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 56796 - 56855 10.4 53 29 Tu 1 . - CDS 56890 - 57444 195 ## ACICU_02409 TetR family transcriptional regulator - Prom 57467 - 57526 3.0 54 30 Tu 1 . + CDS 57470 - 57607 78 ## ACICU_02410 hypothetical protein 55 31 Tu 1 . - CDS 57620 - 57709 63 ## + Prom 57988 - 58047 10.3 56 32 Tu 1 . + CDS 58102 - 58212 62 ## A1S_2211 ADP-ribose pyrophosphatase + Prom 58326 - 58385 8.3 57 33 Tu 1 . + CDS 58603 - 60090 1303 ## COG0477 Permeases of the major facilitator superfamily + Term 60106 - 60156 8.0 58 34 Tu 1 . + CDS 60516 - 60749 176 ## AOLE_12435 hypothetical protein - Term 60750 - 60786 3.5 59 35 Op 1 5/0.100 - CDS 60807 - 61826 682 ## COG5430 Uncharacterized secreted protein 60 35 Op 2 10/0.100 - CDS 61823 - 64321 1600 ## COG3188 P pilus assembly protein, porin PapC 61 35 Op 3 . - CDS 64318 - 65151 638 ## COG3121 P pilus assembly protein, chaperone PapD 62 35 Op 4 . - CDS 65145 - 65663 327 ## ACICU_02417 putative type 1 pili subunit CsuA/B protein 63 35 Op 5 . - CDS 65669 - 66217 443 ## ABAYE1320 protein CsuA - Term 66222 - 66262 7.0 64 35 Op 6 . - CDS 66292 - 66828 597 ## COG5430 Uncharacterized secreted protein + Prom 67130 - 67189 11.6 65 36 Tu 1 . + CDS 67411 - 68049 297 ## ACICU_02421 TetR family transcriptional regulator + Term 68053 - 68099 7.3 - Term 68041 - 68087 7.3 66 37 Op 1 . - CDS 68118 - 68309 190 ## ACICU_02422 hypothetical protein 67 37 Op 2 . - CDS 68315 - 69028 597 ## COG2186 Transcriptional regulators - Prom 69056 - 69115 3.6 68 38 Tu 1 . + CDS 69125 - 70027 891 ## COG2607 Predicted ATPase (AAA+ superfamily) - Term 70034 - 70078 5.0 69 39 Tu 1 . - CDS 70079 - 71314 1420 ## COG0786 Na+/glutamate symporter - Prom 71350 - 71409 10.8 70 40 Tu 1 . + CDS 71675 - 72823 872 ## COG3243 Poly(3-hydroxyalkanoate) synthetase + Term 72847 - 72882 1.7 + Prom 72888 - 72947 6.8 71 41 Op 1 2/0.300 + CDS 72981 - 73817 624 ## COG2207 AraC-type DNA-binding domain-containing proteins 72 41 Op 2 . + CDS 73868 - 74473 402 ## COG1280 Putative threonine efflux protein Predicted protein(s) >gi|333032582|gb|GL891844.1| GENE 1 14 - 235 382 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGTNGGYIGAAVGAAGGSALGRKVAQDRNYDDRYDRRYDRDDRRYYDGDRRYYRGGNYR HDNGLHRGWYKHR >gi|333032582|gb|GL891844.1| GENE 2 370 - 1374 1205 334 aa, chain + ## HITS:1 COG:PA2483 KEGG:ns NR:ns ## COG: PA2483 COG2141 # Protein_GI_number: 15597679 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 331 1 331 333 388 58.0 1e-108 MRSLQDTKFSILELAPIRDDKTIEFSLRHALELAQHAEKLGYDRFWLAEHHNMDGIASSA TAVLLGFIAAHTQRIRLGSGGIMLPNHAPLVVAEQFGTLATLYPDRIELGLGRAPGTDQV TMRALRRGHQETEDQFPRDVVEILQYFKAPQVGQKIIATPGQNTHVPVWLLGSSLFSAQL AAKLGLPYSFASHFAPRMLGQAIELYRENFEPSEYLDKPYVSMGVPVVVADTDEEAQFLA TSAYQRVLGLIRGESLKLKPPVTSMQGLWNTAEQLSVENFYTMAQIGSVETVRSGLQKLL DTYEVDEFIFTCDVYDTVKRLDSFTQLMQVKSGN >gi|333032582|gb|GL891844.1| GENE 3 1521 - 2084 272 187 aa, chain + ## HITS:1 COG:PA1538 KEGG:ns NR:ns ## COG: PA1538 COG2072 # Protein_GI_number: 15596735 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 19 186 167 357 527 63 28.0 2e-10 MSIDLKNNVAKSAIFQNTVEDFEAFTGQILSSNQLKEFDFSHLNVAIIGTDQETVTHLEK ICQQAKFVTVFQITPHFILPHSQIGIHRLITHPLIAKNRRLFNNRVKSILALRFLETQVN ETWLKRLLTPNTARANKTFFKSDSYYTALQRANCKLQTWPIVKVTDTAIYSMDGTQRPVD IIIRTTP >gi|333032582|gb|GL891844.1| GENE 4 2118 - 2582 427 154 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02361 NR:ns ## KEGG: ACICU_02361 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 154 1 154 154 260 100.0 1e-68 MKNDANIDVEVLDIPEYIDQPEYVKNKTANYTLQTIGWFCLMWLLFPLVSLFLWIFEGHL IYDYVWVDHVSEVKTLLHLLLLIGLSALILILWASYNWLRFHGDDRRSKAPNSSVELLAS QFMVSTESLSELQKSQRIILHYDEQGYLTRYDLK >gi|333032582|gb|GL891844.1| GENE 5 2579 - 3826 853 415 aa, chain - ## HITS:1 COG:YPO1953 KEGG:ns NR:ns ## COG: YPO1953 COG1215 # Protein_GI_number: 16122199 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Yersinia pestis # 6 409 28 438 444 449 55.0 1e-126 MKVLLDILFAFAFLYPLLMAWTWMVGGLWFFFKREYHEQQLPEPSSEGCSIIIPCFNEEA QVRQTIRYALQTKYPNFEVIAVNDGSSDSTAEILDELAAQDARLRVVHLAENQGKAVALR SGVLVSKYEYLVCIDGDALLHPHAVLWLMQPFLNFPRIGAVTGNPRILNRSSILGKLQVG EFSSIIGLIKRAQRTYGRIFTVSGVIAAFRKTALVRVGFWSDDKITEDIDISWKLQMDHW DIQYIPQALCYIYMPETFKGLWKQRLRWAQGGVEVLLEYIPKMFKLRLRRMWPVMLEALV SIIWSYVMIMIFILFFVGLFVDLPQQFQINSLMPQWYGVILGGTCLVQFLVSLWIDHRYD RGRLFRNYFWVIWYPLFFWLLTLFTSVVAVPKTIFNTKKRARWVSPDRGFRGDHS >gi|333032582|gb|GL891844.1| GENE 6 3826 - 5655 1519 609 aa, chain - ## HITS:1 COG:RSp0287 KEGG:ns NR:ns ## COG: RSp0287 COG0726 # Protein_GI_number: 17548508 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Ralstonia solanacearum # 13 401 19 424 724 257 37.0 4e-68 MNNLLSKMLGCALVSTLLPLQFAYAQIEKDLPKNHTVSLTFHDVRDGVLKEGDRDIYAIQ TKNLAQFFDWLSQSDWKPIRLKDIEEARKQGKELPHNSILLTFDDGALSSYSRVFPLLKQ YQIPAVFALPTSWLNGNTQAGYEAYGQGNLVNWKQVREMQASGLAEFASHSDDLHHGVLA NPQGNEQPAATSYTYLKSQKRYETDVEYQQRILQDLKKSYAVLKKEVGVEPKAIIWPYGA VNEQLEKLSQEAGFIFSFSLGRDGMNRVSDSTFKRSLVTNNPTAEQLTEGMINILNFEEL DLFKQPRHFVSMDLKQLAASTNTQSDEKLGLLLSKLYSLKNNTLILKPLDDQDGDGQYDI AYFPTTQLSVQQDILNRTLWQAQTRAGQSVILELPVYPQKNKPFLVVDLAKDIARFNSNL SGIQLNAGTTLNCAMQSTTIKENACADQLKQLTYVSQLTQKAVKPYLNMSNQAQFSLLLT PDFEHIENLPTLLKTLLSQHDLVNLKFNIVGKQKQFNHVLAILNTLDAKYKQRIMLTLSL PENSQQNAWQEVKQGLFNIQRIGIQKFGIDGYTNENSKNVHEYLYNPISLNSSSVMYQPF AGLATEGKK >gi|333032582|gb|GL891844.1| GENE 7 5655 - 8057 1924 800 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1394 NR:ns ## KEGG: ABAYE1394 # Name: not_defined # Def: biofilm synthesis protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 800 13 812 812 1492 98.0 0 MPIHLYAAQVDVLREQAIQNYRAGQTQQAVSQLDQLLNKYPHDQKLLADYLFIMSSEKRD LTNFSRFLVNINYVDFPEYAKLPLIQNFRDFKHFKTAIDWSNKFNIQKSVDGRILLSVLY AEAQDVANAKDQLSKIDIKGLTADQLVRVAYAYRLINLPVDALATVEHAYQQQTKSSSVL QEYVYDLIAIGSYKKAQQLLQASEKTEQTVQMLQTLQVSEFSQHINNAIARYKYLNREGL ADAESFAELDKVLEQGQKIHQQMNPSDPNYLRFYYDYLYGLDFRGRSKAVIENSTQLNIP LEKLPAYVRHAIADSYLAEQKPKKAEFAYKTLLTEKNYPDMTVYTGLYYSYIEQEKYKEA EQLLAEVDRLIPTYKYSQAKGVDKISHPDRDDYIALQGMHLAYANHLDQAEKHFQKKVEQ APANESLINNLARVERWREKPLEAKKTLSRLNGIDPIAKDTRINEMQNAQALGDIPTWRK TTQNLVQYYPDDSGVIKSRKELEDRNRATISHSTTWGQSKAEGRDTVSEQNGLKDREMET RLNSPWINDNYRLFAWHQDRYGEYRFGDVHDQRYGVGAEWQANRKALSAIVSQSTDGGQA GVRLDWSQWLNDHWQYQLQYNSQADIPLQALDAGEDGQSYRAAVTWQKDESRQIGASYSL TDISDGNKQQEFSTFWRERLFDAPHHITYGTVRGFYGTNSQDQTAYFSPSSHYSAELNLS HDWVTWREYERSFKQHFEAGVGLYKQADYSAKPTYSLQYQHQWQLSRTWQLNYGIGWQYH PYDGHDEQHTYGIFGFEGRF >gi|333032582|gb|GL891844.1| GENE 8 8026 - 8187 79 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIKVASYLIIVMCVTFLTILSHLDMGLFDSQNAKEMCFFIGLSLANSFIRCSG >gi|333032582|gb|GL891844.1| GENE 9 8479 - 9315 901 278 aa, chain - ## HITS:1 COG:PA1769 KEGG:ns NR:ns ## COG: PA1769 COG1806 # Protein_GI_number: 15596966 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 6 276 2 272 274 304 54.0 1e-82 MSESKQFKRSVFFISDGTAITAETLGHSLLAQFPNVDFDIHIMPYITTEEAAMAVVVEIN KCQTRDGCLPLVFDTLVDPHVREIINTAKAVNLDVFEGLISKLEQELGTPPTTLVGQTHA VTDSEYYKARIDAVHFALDNDDGARTRHYDKADLILIGVSRSGKTPTSIYLSLQFGIRVA NYPLTEEDLDDNRLPAVLREHRSKLFGLMIDAERLVAIRSERKANSRYASFSQCQMELRA IEGIYISEGIKYLNVTEMSIEEISTRILQMTGLKRRIG >gi|333032582|gb|GL891844.1| GENE 10 9471 - 11849 3092 792 aa, chain + ## HITS:1 COG:PA1770 KEGG:ns NR:ns ## COG: PA1770 COG0574 # Protein_GI_number: 15596967 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Pseudomonas aeruginosa # 1 786 1 786 791 1286 79.0 0 MEARVIGLEKLGKHDVELVGGKNSSLGEMISHLSNAGVSVPGGFATTADAYREFLDQSGL NARIQAELAELNVDDVNALAETGAKIRQWIVETPLTPGLEQEIREAFAALSNGNPDIAVA VRSSATAEDLPDASFAGQQETFLNIRGIDNVLIAVKEVFASLFNDRAIAYRVHQGFEHSL VALSAGVQRMVRSETGAAGVMFTLDTESGFRDVVFITASYGLGEMVVQGAVNPDEFYLSK PLLNAGKHAVLRRNLGSKHQKMIYGEEGSAGKSVVVVDVEKQERQQFALNDHELQELAKQ ALIIEKHYGAPMDIEWAKDGDDGQIYIVQARPETVKSRQNVGTMERYLLKQKGTVLCEGR SIGQRIGSGKVRIVNSIKEMDKVQDGDVLVSDMTDPDWEPVMKRAAAIITNRGGRTCHAA IIARELGVPAIVGCGNATEVLTDGQEVTVSCAEGDTGFIYEGALDFEVQRNSIESMPKLS FKIMMNVGNPDRAFDFAQIPNEGIGLARLEFIINRMIGVHPKALLNIESLPRETRAAVMT RTAGYASPVEFYVEKLVEGIATLAAAFADKPVIVRMSDFKSNEYANLIGGKLYEPEEENP MLGFRGASRYVSDNFRDCFELECRALKKVRDEMGLTNIQIMIPFVRTVSEAKRVIELLAQ NGLKRGENGLKVIMMCELPTNALLAEQFLEHFDGFSIGSNDLTQLTLGLDRDSGIVSHLF DERDAAVKALLSMAIHACRKAGKYVGICGQGPSDHPDLAKWLMEQGIESVSLNPDSVLDT WFFLAEEKIKQI >gi|333032582|gb|GL891844.1| GENE 11 11914 - 12669 803 251 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001299 NR:ns ## KEGG: ABBFA_001299 # Name: not_defined # Def: RDD family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 251 1 251 251 451 100.0 1e-126 MQIYLARNNQQAGPYTLEQLNQMLASQQVLLTDLAWHEGMTEWKALGELTQGKLVYQPTG YSAFSANTNTPYNETIQHIRVETKTHELASISSRALAKIIDLLLWLPIAAIPSFFFNEAQ YKQLFELQKQMQSAEVASTKAAELQQQLFTLIPIEAWHTMLLYVVIMLAIQAFLLTKFGQ SIGKKIVGIRIVDAETNGKVNLTRIFLLRSVVFIILNLLFMPISTIIDYAFALGQKRQAL HDKIARTKVIK >gi|333032582|gb|GL891844.1| GENE 12 12986 - 14038 1030 350 aa, chain + ## HITS:1 COG:PA1317 KEGG:ns NR:ns ## COG: PA1317 COG1622 # Protein_GI_number: 15596514 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 2 # Organism: Pseudomonas aeruginosa # 11 347 13 299 331 296 48.0 5e-80 MRQTILAVLSLSTLAALLTGCGGDMVLLNSKGPVGQGQSDLMMTAIYLMLLVVIPSIIMA LWFGWKYRASNKDADYKPTWAHSTAIEVVVWGIPVIIIGILAWLTWWGSHKYDPYRPLES DKAPLTIQVIAEQFKWIFIYPEQNIATVNEVRFPEKTPLSFKITSNFTMNSFFIPQLGGQ IYAMAGMQTHLHLLANETGVYRGFSSNYSGYGFSQMRFKAHSVTEQQFNEWVAAVKAGNG TTINPEAVQKTTLDQAELATLRDGDRSKHQIEHLVNRAKAAGDQEALAKAEAMKPFPTKP HPVTYYSSVEPKLFETIINHYMSNYHGADHSAAHTTAETHVAAEHAAQGE >gi|333032582|gb|GL891844.1| GENE 13 14042 - 16033 2089 663 aa, chain + ## HITS:1 COG:ECs0485 KEGG:ns NR:ns ## COG: ECs0485 COG0843 # Protein_GI_number: 15829739 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidases, subunit 1 # Organism: Escherichia coli O157:H7 # 4 658 1 656 663 846 67.0 0 MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIG IMYIIVSVVMLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGL VVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSG IQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVL IIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLY SEIVATFSRKALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIP TGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIA HFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMG MTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDART LEWATSSPAPFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMF ITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYALLEKHL KKD >gi|333032582|gb|GL891844.1| GENE 14 16038 - 16658 375 206 aa, chain + ## HITS:1 COG:PA1319 KEGG:ns NR:ns ## COG: PA1319 COG1845 # Protein_GI_number: 15596516 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 3 # Organism: Pseudomonas aeruginosa # 11 206 17 209 209 217 62.0 1e-56 MAEVLHHDNHGHDGHHEHDDTDLTVFGFWTYLMSDLILFGSLFIAFAVLSSHVPPGTPSA YDLFHESLGYVLTETFALLISSVTFGFAVLASYKKNVNQVITWLFITFLFGATFIGMELY EFHHLVEEGHGPTHSAFLSSFFTLVGTHGIHVTSGLVWMLVLMYQIKTKGLTLPNTRRLA CLSLFWHFLDIVWICVFSVVYLLGVL >gi|333032582|gb|GL891844.1| GENE 15 16658 - 16987 233 109 aa, chain + ## HITS:1 COG:STM0440 KEGG:ns NR:ns ## COG: STM0440 COG3125 # Protein_GI_number: 16763821 # Func_class: C Energy production and conversion # Function: Heme/copper-type cytochrome/quinol oxidase, subunit 4 # Organism: Salmonella typhimurium LT2 # 3 109 2 108 109 99 57.0 1e-21 MSSHEHNAAGASHGNFKQYTVGFILSVILTIIPFGMVMAGGFSRGLLVTVIAITAVAQVL VQLVYFLHMNTSSEQRWNMIAFIYTILCIAVLLIGSVWIMNYLHYNMMI >gi|333032582|gb|GL891844.1| GENE 16 16998 - 17876 519 292 aa, chain + ## HITS:1 COG:STM0439 KEGG:ns NR:ns ## COG: STM0439 COG0109 # Protein_GI_number: 16763820 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Polyprenyltransferase (cytochrome oxidase assembly factor) # Organism: Salmonella typhimurium LT2 # 1 285 2 286 296 276 51.0 3e-74 MLKKYLFLTKPGILFGNFITTLGGFFLAAQGSIDILLLLLTLIGTTLVVASGCVVNNVID QDIDTKMQRTQNRALVKKTISPTVALVYAFVLGVMGFSILWFGVNGYAFLFAMIGFIVYV GFYSLWTKRTSIHQTVIGSISGASPPVIGYTAVTHQFDVAALLLFLAYALWQMPHSWAIA IYRFDDYKNAGIPILPVARSIYRTKIECVIYILLFAAVLNGLYCFGYTNVFFLITFNALT AYWFYLSIIGFKAENDQLWAKRFFLYSVILITLLSLSFSFTYQSPAPNLPLF >gi|333032582|gb|GL891844.1| GENE 17 18061 - 18444 645 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169633238|ref|YP_001706974.1| 30S ribosomal protein S6 [Acinetobacter baumannii SDF] # 1 127 1 127 127 253 100 3e-66 MRHYEIVLLVHPDQSDQVVGMVERYISQIKEADGQIHRLEDWGRRQLAYPINKIHKAHYI LMNVECGQSTLDELEELFRYNDAIIRNLIIRREHAITEESLLAKSAEEKRARKAQREEAQ QVAQEAE >gi|333032582|gb|GL891844.1| GENE 18 18456 - 18683 389 75 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126642217|ref|YP_001085201.1| 30S ribosomal protein S18 [Acinetobacter baumannii ATCC 17978] # 1 75 1 75 75 154 100 1e-36 MARFYRRRKFCRFTAENVAYIDYKDIDTLKQYITENGKIVPSRITGTKARYQRQLALAIK QARYLSLIPYTDNHK >gi|333032582|gb|GL891844.1| GENE 19 18692 - 19138 716 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126642218|ref|YP_001085202.1| 50S ribosomal protein L9 [Acinetobacter baumannii ATCC 17978] # 1 148 1 148 148 280 99 2e-74 MDVILLQRIKNLGKLGDKVSVKAGYGRNFLIPQGKAVAATEANTAAFEARRAELEKQEAE VLAAAQARAEQLNEVNIVITAKAGDEGKLFGSIGTRDIADALTNAGLTVDRAEVRLPNGA LRHTGEFNIAIQLHHDVVAEVLVTIVSE >gi|333032582|gb|GL891844.1| GENE 20 19339 - 20784 1603 481 aa, chain + ## HITS:1 COG:PA4931 KEGG:ns NR:ns ## COG: PA4931 COG0305 # Protein_GI_number: 15600124 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Pseudomonas aeruginosa # 28 480 17 464 464 470 54.0 1e-132 MSQANATSLTLSSPTENKTSESGQLKEFRTPPHNLAIEQAVLAALMTVAESFEQVSDLLK ENDFYATRHKYIYRAIEKLAQENSPYDAVLVNDWLLKQNLLDAIGGEEYLMQLMADSPSS FYNLETYATKIKEFSTLRSMIKVSTEILQNAYDTKGRGVSEILDLAETSIFSLAEQHNNN KKDSGPKAISSVTADVISKLDELSKLDGNITGLTTGFLELDNKTSGMQPGDLIIVAARPS MGKTTFAMNLVESVLQYNKLPALVFSMEMPADSIAMRLISAMGKVHQGHLRSGNLDADEW TKVTGTILQLQQMHLYIDDSSALPPTEVRARARRIAKMHDGKIGCIMVDYLQLMKVPGMG DNRVGEISEISRSLKALAKEMNCPVIALSQLNRSLENRPNKRPVMSDLRESGAIEQDADL IMFIYRDEVYNKESKEAGTAEIIIGKQRNGPIGTVRLAFEGQYTRFSNLSPEYYSQYDDE E >gi|333032582|gb|GL891844.1| GENE 21 20817 - 21887 1074 356 aa, chain + ## HITS:1 COG:VC0372 KEGG:ns NR:ns ## COG: VC0372 COG0787 # Protein_GI_number: 15640399 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Vibrio cholerae # 1 350 15 365 375 271 39.0 2e-72 MRQATVYIDRQALQYNLNRVKQLAANSKIVSMVKANAYGHGVKDCLAALNASDAFGVACL QEGLEIRELGFEQPVTLIEGVFSEDEMPVAIEQKFECVIHHQQQFEWLIKHKQAYIAQGL KVWVKLNSGMNRLGFKDPEIIEVIKTLKSEGFTCVLAMHFANADVDHPLNEQQKQQFLHI KETCDPILASCCNSAAIFKWPELNFDYVRPGIMLYGASPFADKTVHDLDLKPVMTFTAEI IALNHIEAGEHVGYGSTFCAQQAMDIAIVSIGYGDGYPRAYVKQNFVAIDGKLCPVVGRV SMDMIAIDVTNTQVKLGTQVELWGNHRLVDDVAEANGTIGYELLCRLSSRPVRQGT >gi|333032582|gb|GL891844.1| GENE 22 21940 - 22674 641 244 aa, chain - ## HITS:1 COG:PA1733 KEGG:ns NR:ns ## COG: PA1733 COG3484 # Protein_GI_number: 15596930 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted proteasome-type protease # Organism: Pseudomonas aeruginosa # 1 242 1 241 243 278 55.0 8e-75 MTYCCALRLEQGLVFISDTRTNAGVDHISVFRKLHTFGVTGERFIALQTAGNLATTQAVI GHLQNALILQQEPNLYSINTMFEVADLVGKTLKSVLEDISSDTQEQMNYACSILVGGQIK GGDMQLYNVYPQGNFICATTDTPYFQIGESKYGKPILDRALYYAMPLDDALRCSLISFDS TLRSNVSVGLPLDALVYSKDSFVIPMGKRITEDDPYFSQISRQWSDTLRRGLQEMPKPTD DYWR >gi|333032582|gb|GL891844.1| GENE 23 22691 - 23470 396 259 aa, chain - ## HITS:1 COG:PA1732 KEGG:ns NR:ns ## COG: PA1732 COG1305 # Protein_GI_number: 15596929 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Pseudomonas aeruginosa # 1 256 1 256 266 207 42.0 2e-53 MKLMVNHQTHYNYTETAKNSIQYIKMMPQTSLHQHVMNWAISVPGDKTLKRDIFNNIWIT ASQRYEYQHLTFMAQGIVELLNTEIGGVDISIPINLFLQSTEATKYDAEMLDFAQRIVTV KDRQHIALLSENILQKMPYQPDSTSVHTTATQAFQAGQGVCQDHAHVLIAMCRALQLPAR YVSGYLFDQNSPHLASHAWAEVFLDNQWYCFDVSNQLFTPKHHIYLAVGRDYLDVAPIRG VREKGGTENMMSVVQVLAC >gi|333032582|gb|GL891844.1| GENE 24 23473 - 24069 511 198 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02381 NR:ns ## KEGG: ACICU_02381 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 198 1 198 198 325 100.0 7e-88 MVLLNSSAHHIYWLGRYLMRIQFAVSHLPFTDDAKAAQFAAAFGLVIDQAELLNCYMLDT KQTYSLLNQFAIAKDNIQELRGILSSNAYAELNHAIKGVQAHPDSLKQALAKCNQILDTE HEDIALFLHLGQKIELFDIRLRFQQDLTQLLQELEQLLQQLNDLGWNKLTQPWQLLKDHP NWEAYYNFTQQLEYMFEA >gi|333032582|gb|GL891844.1| GENE 25 24092 - 25642 1450 516 aa, chain - ## HITS:1 COG:PA1730 KEGG:ns NR:ns ## COG: PA1730 COG2308 # Protein_GI_number: 15596927 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 44 512 1 469 470 561 57.0 1e-160 MSEQEKDLQADIDYFIQEQATNALLNQTSFIENLSVQSNLFEQLKSQFFNEMLDDATSNG VASKKIEQWLSIRTLDELKQLNAEAKQHFLYHGITFNVYGDKEGVERTIPFDLIPRVIEK KQWEKIAAGCAQRVKALNYFLDDIYHGQHILKEQLIPESQIICHEAFQPHMLKHTLKGKI YSQISGIDIIRDSEGEFFVLEDNLRTPSGVSYMIECRNISQQLMPELCAANNLQGIEHYP SLLKEILQENSEIDQPFIVVLTPGRFNSAYYEHAFLAREMDVPLVTNRDLFVENDQVFVK TIRGRQKVDVIYRRLDDDFLDPLAFRPDSALGVAGLMSAYLQKNVVIANAPGTGVADDKS IYPYVDQMIQYYLGETPILKNVPTYQCREKEHLDYVLAHLDQLVIKEAQGSGGYGMLIGP KASSCEIDEFRQKLLATPHEYIAQPTLALSVAPTLTTAGVAERHIDLRPFVLSSPYRTEI VPGGLTRVAMQAGSLVVNSSQGGGIKDTWVVETLHS >gi|333032582|gb|GL891844.1| GENE 26 25868 - 26875 1015 335 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02383 NR:ns ## KEGG: ACICU_02383 # Name: not_defined # Def: transcriptional factor # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 335 1 335 335 645 100.0 0 MSVTEKETSNSLYRQWQILSRLPTGKWIGTRELQEMLEREGIEISLRTIQRDLNQIAQRF PIESNKAVPQGWRWQSDAPIQSLPHMTSSQAVTFMMVEEHLKHLLPPSLLDEMGPWFDLA KRSLSTQNNVRQWINRVRIVPASQPLIPPVVDRAAQQAIYEGLLQDKQIECVYRARVNQG EDKTYILNPLALVQKGAVIYLICTRHDKTEVQTFALHRFKSAKVLESRALHPVNFDIDHY IDSGALGFRVDYNQPTESIQLTLTMTEQTAKTFYESQLSKDQTITPIEENIVEVTATVPF TSQLVWWLRSFGKKLLHIEPAQVHNAVREIEPDSK >gi|333032582|gb|GL891844.1| GENE 27 27262 - 29142 2320 626 aa, chain - ## HITS:1 COG:PA5565 KEGG:ns NR:ns ## COG: PA5565 COG0445 # Protein_GI_number: 15600758 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Pseudomonas aeruginosa # 1 618 1 619 630 917 73.0 0 MHYPKVYDVIVIGGGHAGTEAALAAARMGRQTLLLTHNIETLGQMSCNPAIGGIGKSHLV REIDALGGAMALAADKGGIQFRILNSRKGAAVRATRAQADRVRYKAAIRETLENQANLDI FQQAADDLIVEGDTVKGVVTQMGIRFDAKTVVLTTGTFLGGVIHVGLEKSSGGRAGDPPS IALAQRLRELKLPVGRLKTGTPPRIDARSVDFSVMTPQPGDFPSPVMSFMGDVSMHPEQV NCYITHTNEKTHDIIRGGLDRSPMYTGVIEGVGPRYCPSIEDKIHRFSDKDSHQVFLEPE GLDTHELYPNGISTSLPFDVQFELVRSIRGMENAHILRPGYAIEYDYFNPQALKFTLETK AINGLYFAGQINGTTGYEEAGAQGLLAGLNAARRAWEQEEWTPKRDQAYMGVLVDDLITL GTKEPYRMFTSRAEYRLMLREDNADQRLTTIGRELGLVDDVRWAAYCEKMEAVERETSRL QHLWAAPNNPMGKKFVEMTGADLSKECSAIDLLKRPNINFGQIAELTGSEVSQQVGEQIE IAVKYEGYINRQHEDVAQLKRLEETKIPADFDYDVVSGLSREITQKLKTVRPETLAQASR IPGVTPAAVQLVMITIRKNNMTKKTA >gi|333032582|gb|GL891844.1| GENE 28 29375 - 29605 208 76 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001281 NR:ns ## KEGG: ABBFA_001281 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 76 1 76 76 141 100.0 1e-32 MKTTMLKILTASLICFSGVTFTHAADTSKAETQKQIRVCAKKQQGEWVSYNHNGVTFNGT CQPNENGKLQFKAPAP >gi|333032582|gb|GL891844.1| GENE 29 29762 - 30667 1570 301 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795493|ref|YP_001713286.1| methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) [Acinetobacter baumannii AYE] # 1 301 1 301 301 609 99 1e-173 MKWLQIHITVDQEQVEFTETLLMSLGAVSVTLDDAEDQALLEPLPGETPLWNKVIVTGIY QQDEQDPIDVDTLEAFLKAQLPDVPMRHEELEDQVWERAWMDYYEPIQIGEKFWIVPEWL EPPEADATNIKLDPGLAFGTGNHASTFLCLQWLGKTDVKDKIVIDYGCGSGILGVAALLL GAKKVYATDIDPQAVLATKQNAELNGVLDRLYVGLPEEFDQEFKPQQADVLVANILAGPL MALAPEFAKLLKSDGDFALAGVIEEQVADVSGVYSEFFDILDVEKREENWCRISGKRKTT N >gi|333032582|gb|GL891844.1| GENE 30 30681 - 31523 517 280 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001279 NR:ns ## KEGG: ABBFA_001279 # Name: not_defined # Def: MJ0042 family finger-like domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 280 1 280 280 526 100.0 1e-148 MNEKQTRCPKCLTVYKVSLTQLTVAQGMVCCPKCNLNFNALTNLVNVEQPETVNSSALAH GSMQTRYMTHSHVLDIFDQKVENSNIDLLTYLNNLNYFHNEPINALPNLNLAEQATSPEQ DNGKKHSWLYYTLWSSANLILILVFTFQILWFNPKLMQQSPAISHAFNYVCQILHCNKSA EQYQLLYIEKVKLRKIGTEHTQLSGVLINQNNKSIELPNLKLSFGKETDQEEIIFTPQQY LVENLRGIQRIPTNTPFRFQVELNKSKKSLVNYRLEIVHP >gi|333032582|gb|GL891844.1| GENE 31 31900 - 32169 297 89 aa, chain + ## HITS:1 COG:YPO3654 KEGG:ns NR:ns ## COG: YPO3654 COG2901 # Protein_GI_number: 16123796 # Func_class: K Transcription; L Replication, recombination and repair # Function: Factor for inversion stimulation Fis, transcriptional activator # Organism: Yersinia pestis # 16 86 27 97 98 87 60.0 6e-18 MNSKSPIFTAQSDVALRIHVDRAVRHYFAQLQGEQPSQVYDMVLAEMEKPLLSVVLEYTR GNQTRAAEILGLNRGTLRKKLKAHGLMSE >gi|333032582|gb|GL891844.1| GENE 32 32259 - 33833 1949 524 aa, chain + ## HITS:1 COG:PA4854 KEGG:ns NR:ns ## COG: PA4854 COG0138 # Protein_GI_number: 15600047 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Pseudomonas aeruginosa # 1 524 8 535 535 758 76.0 0 MTIKRALISVSDKTGIVEFAQNLAALGVELLSTGGTYKLLKDNNIAVVEVSEHTGFPEMM DGRVKTLHPKIHGGILARRGLDEAVMQEHNIDPIDLVVVNLYPFAATVAKPNCSLADAIE NIDIGGPTMVRAAAKNHASVGIVVNASDYDTVISELKASGSLSYETRFDLAVKAFEHTAQ YDGMIASYLGARVGKAEGEADLFPRTFNTQLNKAQDLRYGENPHQSAAFYVEANAKEASV STAKQLQGKELSYNNIADTDAALECVKSFAKPACVIVKHANPCGVAVSLDGIKAAYDLAY ATDPESAFGGIIAFNRELDVATAQAIVDRQFVEVIIAPSIADGVLEVTGAKKNVRVLVCG ELPAIDARAPQLDYKRVNGGLLVQDQDLGMITKDDLKVVTKRAPTEQEIDDLIFAWKVAK YVKSNAIVYAKNRQTIGVGAGQMSRVNSARIAAIKAEHAGLVVEGAVMASDAFFPFRDGI DNAAKAGIKCIIQPGGSMRDEEVIAAADEAGIAMVFTGMRHFRH >gi|333032582|gb|GL891844.1| GENE 33 33959 - 35245 1699 428 aa, chain + ## HITS:1 COG:VC0275 KEGG:ns NR:ns ## COG: VC0275 COG0151 # Protein_GI_number: 15640304 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Vibrio cholerae # 1 428 1 429 429 547 66.0 1e-155 MNILVLGSGGREHALAWKIAQDAKVTQVFVAPGNAGTATEPKCVNVQLDILDNPAIIAFA KENNVELIVVGPEAPLVNGVVDAAREAGVKIWGPTQYAAQLEGSKAFAKHFLKRHNIPTA FYEVFTEVDAAKAYVEKNGAPIVIKADGLAAGKGVIVAMTNEEAFAAIDDMLAGNKFGDA GSRVVIEQFLAGEEASFICMIDGKNILPMATSQDHKRIFEGDQGPNTGGMGAYSPAPVVT PDVFERVMNEIMRPTVDGMAADGHVYTGFLYAGLMIDEQGQPRVIEFNCRFGDPETQPIM MRLKSSLVDLVEAGIAGNLPSEAEWDERKSIGIVLAAEGYPDSVRKGDVISGIGQSPEDT KIFHAGTATREDGHIVTSGGRVLCVTALGDSVLEAQINALEVCGQVTFTGMQYRSDIGYR AIAREKAE >gi|333032582|gb|GL891844.1| GENE 34 35494 - 36360 1004 288 aa, chain + ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 1 275 1 257 260 152 37.0 8e-37 MKKLISLFLSVSVVLLAACGKQQNEPQNGKDSAQLQTVVIASTGSDADIWRYIATLPETK AAGLKLEVKNFTDYVAMNTATANKEVDLNAFQSYAYLVAFNASNKDKIAPVATTYLEPMG IYSSKYKKVDEFPQGASIAIPNDAANEARALLLLQSAGLIKLKADFDPAKGTPSDITDNS KKIDIKPIQMATAVRVKDEVDAIVLGNTLAMEGGLNVLKDSIYYEPVDQSTKLNVNILAT AESRKDDPVLQKVGQLYHTEAVKKYVEQHFGGTKVDVNQPISYLTQAK >gi|333032582|gb|GL891844.1| GENE 35 36436 - 37461 1000 341 aa, chain + ## HITS:1 COG:YPO1073 KEGG:ns NR:ns ## COG: YPO1073 COG1135 # Protein_GI_number: 16121374 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Yersinia pestis # 1 334 1 337 343 320 48.0 3e-87 MIQFKNISKHYQLKGQTIRALDQINLEIPEGSIFGIIGYSGAGKSTLIRLINLLERPNEG QVIINQKDFTALDARSLRQERANIGMIFQHFNLLQTKTVAENIEMPMRLLNYSKAEREKR LNELLEFIDLKHKKDAYPDELSGGQKQRVGIARALANHPKILLCDEATSALDPQTTKSVL ELLKKINQEQKITIVMVTHEMDVIETVCDHVAVMEAGKVIEQGSTIDIFSNPQHPTTKNF IQTVLHQQLPVNILNQLENQHHHSIYCLQFLGRSAQEPVIQSLIKQFDISLNILFANMTE INGTVIGQMFVQLLGDPQLIRQAIEFLEKNEVSVVQSGDQV >gi|333032582|gb|GL891844.1| GENE 36 37458 - 38153 920 231 aa, chain + ## HITS:1 COG:SA0421 KEGG:ns NR:ns ## COG: SA0421 COG2011 # Protein_GI_number: 15926140 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Staphylococcus aureus N315 # 19 229 4 214 219 186 63.0 3e-47 MRDLIVQWLTELTQPFWHSSLSIDQFVTALQETFHMVFFALLFGGIWGFIQGIILLVTRP EGILPNKFIYHLLNPIVNALRSLPFIILLIAVIPLTKLLVGTSIGTWAAIVPLTIYVGPY MGRLIETSLLEVNEGIIESAQAMGATPWQIISRFILPEARSSLILNLTTATISLIGATAM AGAVGAGGIGDLAISYGYQRFDTSVVILTVIVLLLLVQIVQMLGNWLAKMR >gi|333032582|gb|GL891844.1| GENE 37 38311 - 39042 756 243 aa, chain + ## HITS:1 COG:PA1813 KEGG:ns NR:ns ## COG: PA1813 COG0491 # Protein_GI_number: 15597010 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pseudomonas aeruginosa # 16 242 13 241 258 207 52.0 1e-53 MRYRIHYIDVQNALQNYIWILEDTETHEAVAVDPTEAELVTHFCQEHQLTLKQIWLTHWH KDHIGGVADLTANTSMAVYGPRDELSKIPGITHPLQHDDHLKFNDLNVEIIATPGHTLGH IVYFIEELNALFCGDTLFAMGCGRLFEGTAEQMYHSLNRLAALPTATKVYCTHEYTLSNA EFALSVEPENHALQERAEQVRMLRQEGKITLPSSIELELATNPFLRAESVDEFAHLRSLK DNF >gi|333032582|gb|GL891844.1| GENE 38 39399 - 39602 292 67 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001271 NR:ns ## KEGG: ABBFA_001271 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 67 1 67 67 122 100.0 6e-27 MKKVVKAKNLIAFRIWLEKLGYSVKNLADGKGFTFSFKKEYGLVTCDLAGNALAMQLGEE FEDHLKA >gi|333032582|gb|GL891844.1| GENE 39 39838 - 41136 1296 432 aa, chain - ## HITS:1 COG:mll5840 KEGG:ns NR:ns ## COG: mll5840 COG1301 # Protein_GI_number: 13474864 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Mesorhizobium loti # 22 426 42 446 497 540 71.0 1e-153 MDFNTLDQETVQKKQKFHQILYVQVIFAIILGILIGHFYPELGESLKPLGDAFIKIVKMI IAPVIFLTVVTGIASMTNMSRVGRVTGKAMLYFLTFSSLALVVGMIVANIIQPGKGLNID PATLVNDKVNSYVEKAHATNITDFFMNIIPQTLVSPLAGGEILQVLFVAVLFGISLAALG DRARPITDFLNNLTAPVFYLVGMLMKLAPIGAFGAMAFTIGAYGIESIGNLLLLIMTFYI TAVLFVLIILGAVARYNGFSIIDLIRYIKDELWLVLGTSSSEAALPSLMDKMQKAGCEKS VVGLVIPTGYSFNLDGTNIYMTMAALFIAQACNVDLSIGEQVALLLVAMVSSKGAAGVTG AGFITLAATLSVVPAVPVAGMALILGIDRFMSECRALTNLIGNACATIVVARWDKALDKD VLDKALRKSKTN >gi|333032582|gb|GL891844.1| GENE 40 41565 - 42131 453 188 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02397 NR:ns ## KEGG: ACICU_02397 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 188 1 188 188 362 100.0 5e-99 MAKVVTGLRPGGRSERIQTAVHQAVKELQKDFEQSQITIPMIAVQAGVTPSTIYRRWGDI NQLFSDVALNELKPDMEPKDLGSFQQDITAWVEQYFEEYASEVGQDLLRDVLYTSNSDSN ARKCETLIIQQLDIIQNRAKLRNELTIPNQVIIEAVIAPMLFRILFTNHELSLEYVYDLL NRLFIKNK >gi|333032582|gb|GL891844.1| GENE 41 42353 - 43471 826 372 aa, chain + ## HITS:1 COG:mll1522 KEGG:ns NR:ns ## COG: mll1522 COG0477 # Protein_GI_number: 13471524 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 3 362 40 404 412 120 28.0 3e-27 MTFMAASSAPTPLYRLYQQLWQFSPVTLTLIFATYAFTLLGSLLIIGSLSDYIGRRPVII AAISLQIISMSFFLFASDVSMLFIARGLQGIATGLAVSAIGAAILDFSKLHGSLINSIAP MIGMAVGIFLTCSILQFSAHPLQLVFEFLCFLLICELILSFLTPETAQRRSGALASLKPN MAIPPQTKSALLSISPINIALWMVSGFFLSLMPSLLAKIFHTSSAWLNGIMFMALALSGA VGILTLRKSTNFRILLTGTLSIAIGAIVLFIAINLTNAVVLFLGSIITGVGFGTAFMGAI RSVMPLALPEERAGLMAAFFVESYLAFSIPAILAGYFVGKIGLMSTANSYISFIILLSLV ALLMIIKNFKNK >gi|333032582|gb|GL891844.1| GENE 42 43529 - 43981 518 150 aa, chain - ## HITS:1 COG:L69304 KEGG:ns NR:ns ## COG: L69304 COG0454 # Protein_GI_number: 15673990 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 2 145 3 147 152 102 39.0 4e-22 MQILRLSDYPQYKEMAAQWFSEKWQIPVEAYLESIQISIDQKHAIPQWYIVLNKDKYLIA GAGVIDNDFHERKDLTPNLCALFVEENYRNQNIAKQILDFVREDLSNQGIQTLYLITDHT EFYEKCGWRFLTLVKDEEGEMVRMYVADTF >gi|333032582|gb|GL891844.1| GENE 43 44009 - 45376 1480 455 aa, chain - ## HITS:1 COG:SMc04291 KEGG:ns NR:ns ## COG: SMc04291 COG2133 # Protein_GI_number: 15965802 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Sinorhizobium meliloti # 4 433 6 440 442 530 62.0 1e-150 MLTRFLLPILGTTVLVTGCASSSQYPINESYGPEPKLPEPKTSLFPTVNIAPAQGWPSGV MPTPAEGLKVKAFAKGLEHPRWLYVLPNGDVLVAETDAPPKPEDSKGIKGKIMTFVMRRA GSSHPSANRISLLRDTNGDGIADQKTVFLKNLNSPFGMALVGNHLYVANTDSLMRFPYQE GETHITSTGTKVLDLPGGPLNHHWTKNVIANREGTKLYITVGSNSNVAENGLDQEKGRAQ IMEFDIASGQSRPFATGLRNPNGMAWQPQSGKLWTVVNERDEIGSDLVPDYMTSVQDGAF YGWPYSYYGQHVDVRIKPQNPDMVARAIKPDYALGNHTASLGLAFYTAELMPQFRGGAFI GQHGSWNRKPHSGYKVIFVPFRSGQPSGPPQDILTGFLSEKGKAYGRPVGVAIDFSGAVL VADDVGNTIWRVSPVAETTYESPTQQSIRSSVTQP >gi|333032582|gb|GL891844.1| GENE 44 45727 - 46638 723 303 aa, chain + ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 1 291 1 290 293 235 45.0 1e-61 MSKNLATLIGLSAILMWASMVGFVKHITTAIGPDVGITLIYSLSALLLLIIFRVPNFKLI SKKYLILGAILFIAYELCFSFALAYSKTAQQAIEVSIVNYLWPSLTVLAFVIFRELKFNV FIILGLLISISGIIFIQTGNGDFSLGRVVDNFHSNPLSYILAFIGAIIWAFYCVLTKKMG KGQNPISIFFLGVALTLWLKLLFSGQVSLPSLDLNTILSLIVASAAIGLGYAAWNIGIIH GNITMLVVASYFTPIISSLLAMLVLQTELSISFWQGTAMVTAGSLICWLSTNWAVIRSYF RIN >gi|333032582|gb|GL891844.1| GENE 45 46653 - 47381 729 242 aa, chain - ## HITS:1 COG:YPO2758 KEGG:ns NR:ns ## COG: YPO2758 COG1794 # Protein_GI_number: 16122962 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Yersinia pestis # 1 229 2 231 231 248 56.0 6e-66 MKTIGLLGGMSWESTALYYQQINRMVQNKLGKLHSAKIILNSVDFEEIAALQSKGLWQEA GAYLAEQAQNLEKAGADCILVCTNTMHKVAPQIEDAITVPFIHIADATAKEILSQNIRKV ALLGTAFTMEQDFYKARLQDLGIEVIIPNDANRKIVHSIIYDELCLGVINPDSQHKYTTI VEELIGQGAEGIILGCTEICMLIGDIKFSVPLFDTTTIHAKEAVNFALEQKTAARSIAAG SV >gi|333032582|gb|GL891844.1| GENE 46 47574 - 48197 427 207 aa, chain - ## HITS:1 COG:RSc0600 KEGG:ns NR:ns ## COG: RSc0600 COG3009 # Protein_GI_number: 17545319 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 6 197 27 204 211 80 27.0 1e-15 MTACSSSPTPNYYTLTPKVTPVSNSTVQVIEVLPVGIPDRLDRAPLVLQESNGKSTVLDN ERWTSTLGTQLRDTLSAGLQQKLGAIDSYSSGLSGNNQPLYRVSTDFSHFDIVDNSNINV AVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKKMEAIVSASNEAMSQ IINTISSSIVALDSNKKMNINNGICSS >gi|333032582|gb|GL891844.1| GENE 47 48274 - 49935 1561 553 aa, chain - ## HITS:1 COG:RSc0601 KEGG:ns NR:ns ## COG: RSc0601 COG3008 # Protein_GI_number: 17545320 # Func_class: R General function prediction only # Function: Paraquat-inducible protein B # Organism: Ralstonia solanacearum # 22 549 6 546 547 464 42.0 1e-130 MSENKTTSETSDHHETDVELENMNDLPEPQEKKNRWKPLLIWIIPLIALLIALSLAVKAL LSNGPTIEVSFRTAEGLVAGKTTVRYKQVDIGVVRQIDLAEDRSHIIARIDLRKDASNFA AQDSRFWVVRPRIGTSGVSGIDTLLSGSYIEVDGGKSPEKKLEFTGLEIPPVITSDVPGK EFFLKADDLGSLDIGSPIYYRRINVGQITAYKLSDDGKSVELQTFIRAPYDKFVTTDTRF WQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAANKSRFNLWDSKAEALK EPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVEAVIYP SRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKFPKAKPATLQILNDGR VVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNTAIESTDKLVKQLDGK VAPGLQATLDDVRKTVRSSESILSSDAPLQQDVRKALQQMTRAAASLQLMADYIEQHPES IIRGKRPEANDEK >gi|333032582|gb|GL891844.1| GENE 48 49949 - 50755 396 268 aa, chain - ## HITS:1 COG:RSc0602 KEGG:ns NR:ns ## COG: RSc0602 COG2995 # Protein_GI_number: 17545321 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Ralstonia solanacearum # 24 230 22 235 247 186 46.0 3e-47 MAKIKNVTPEKITNTNMILKQYPRAKDLSLILCHCCGLLNSSKVNKTDAHKNQILRCVRC HSVLHERKPGSLNRTFALVVAATILYIPANVLPMTVTDSLLGRQQDTIMSGVIYFWQSGD YLVSVVIFMASIFIPMLKLLILYFLLLVVYIQSSAAWKFAPEQCIKLYRIVEFVGRWSMI DVFVVALLTALIQIQSLATILAGPGSIAFGAVVVLTMFASLSFDPRIIWDNFYASQNTNK PNRVSSEKNTIIQAEHSPLNNDSINPSQ >gi|333032582|gb|GL891844.1| GENE 49 50743 - 51360 288 205 aa, chain - ## HITS:1 COG:RSc0603 KEGG:ns NR:ns ## COG: RSc0603 COG2995 # Protein_GI_number: 17545322 # Func_class: S Function unknown # Function: Uncharacterized paraquat-inducible protein A # Organism: Ralstonia solanacearum # 8 197 72 261 292 132 37.0 6e-31 MKLKELAGCEECDTVYRRVPLAYGKRAYCVCCGAELYRHTKPFTTLLALILTALIVFVIA NSFPIVKIELQGNISETTLLGAVWVMFHYDRAFVGVLILITTFIVPLTYLLLLGYVLGTV SILKKCPQFLVGALRTLYFMRVWGMVEVFLIGILVTLVKLMGMVLVIPEIALWAFAVLSL LMVYITSVKVSDIWNEIDRSQPWQK >gi|333032582|gb|GL891844.1| GENE 50 52362 - 54047 1796 561 aa, chain + ## HITS:1 COG:YPO1326 KEGG:ns NR:ns ## COG: YPO1326 COG2985 # Protein_GI_number: 16121608 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Yersinia pestis # 15 560 15 556 562 233 29.0 8e-61 MIEWLQGVLKHSPEILLFLSLAIGFWIGQFQFGKFQFGGVAGSLLVAVVLSLIGVPVDNG VKAILFALFIYAVGFESGPQFFKSLGPQSIKEILLAVFMAVCGLVTVLVMAKIFHLDKGL AAGLAAGGMTQSAIIGTAGDAISRLDLPLAEIQRLQANVAIGYAVTYIFGSLGAIIVCVN ILPKFMGKEIHDDALKAQSERLKGAFELAPGQELAMPEIVGRIYKVKQANGQTIAEIEAK EPSITIERLKRKDQFIDVAPELTLQTDDVILLVGRRASVVSVAEQIGSELQSSQGMEMIM DTSDVILRNSKYLNRTLGDIKANTPAYLKHGIYVLAIKRNDESQPLSNDTVLRQGDVVTV YGTKSDLDRLVKEAGKALPESLKTDWIFHGAGLVVGLVIGLFVIRLGDVPLTLGAGGGAL LSGLLFGWIRSRNQVHGNMPLAASQLLKDLGLAGFVAAVGLQSGLQAIQTIKESGLSLFM IGVVVTLVPLLLSMLFARYVLRYDNVAVMAGALSGSRSANPAFGAILDKAGNSIPTVPFA ITYALANVFLTLLGPLIVGLA >gi|333032582|gb|GL891844.1| GENE 51 54104 - 55702 1795 532 aa, chain + ## HITS:1 COG:APE0674 KEGG:ns NR:ns ## COG: APE0674 COG0436 # Protein_GI_number: 14600882 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Aeropyrum pernix # 167 326 102 255 405 70 32.0 1e-11 MGKVDYSKYAKLSPFELKDNLIELAQSKTDRMMLNAGRGNPNFLATIPRRAFFQLGLFSA TESEFSFSYMPEGLGGFPRPVGLQSRFDNFILENRDKPGIVFLGKAVSYVRDQLGLDPDL FLLEMVEGILGCNYPVPDRMLRVSETIIKEYVLREMGVQGMQKSDLDLFAVEGGTAAMAY IFNSLKENKIIKNGDRIAIGSPIFTPYLEIPKLNDYQLEEVLIEADPKLGWQYPESELRK LEDPSIKAFFLVNPSNPPSVKMSDEGLAILADIVKKRPDLIILTDDVYGTFADNFKSLFA ICPDNTILVYSFSKYFGATGWRLGVIALSNNNVLDKQIANLSKKEKKELEDRYSSLTTDP ASIKFIDRLVADSRNVALNHTAGLSTPQQVQMVLFALFNMMDSRQSYKKAVKSVVRERDA ALYRQLGVDVPTDPNAVDYYTLVNLENTSRTLYGDEFADWVMKNKNPTELLFRVADETGV VLLPGSGFGVQHPSARASLANLNEYQYAAIGESLRRFADEAYAEYTKAKKIK >gi|333032582|gb|GL891844.1| GENE 52 55753 - 56655 661 300 aa, chain - ## HITS:1 COG:SMc00424 KEGG:ns NR:ns ## COG: SMc00424 COG0697 # Protein_GI_number: 15964096 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Sinorhizobium meliloti # 11 290 8 289 304 181 39.0 1e-45 MDDHHLKRKVGTLEMVVAMLLSGSIGLFVIKSGQSPVNIVFFRCLISALCLIPICYFYGH FKKVYFGKKELFLMVTSGLLIIFNWVLLFAAFPKTSISLATIVYHVNPFVILFLGALAFH EKLNKNDVLWTIVAFVGLIVIIGLGSASVNSNELVGLGLVLIATTLYSISVLITKKLSNT PPLLIVFIQTLSGAIAMTPFMSVFENPPIGQQWLFVVGLGVLHTAFLYYLMYSAIKKIPL NNIAILSFIYPISTIVIDYFFFDHVLTSTQVLGAGLILLGVLGVKLHWNIFAVKKVGIRN >gi|333032582|gb|GL891844.1| GENE 53 56890 - 57444 195 184 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02409 NR:ns ## KEGG: ACICU_02409 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 184 1 184 184 328 100.0 1e-88 MKNLGTSFRALHVLYIASDLFKQYGFHKVGVDRIISETKISKATFYNYFHSKERLIEMCL LLQKDTLMEKVRVEIETTHYSTFAHKLRQIYHLHANLKSAYYLLFKAIFEIKTSYPTAYQ TAIRYRRWIKNEIFCLLMETKKAVSYAEAEIFIFMIDGAILGLLTSDRAEEQTKLLDYFL VRVN >gi|333032582|gb|GL891844.1| GENE 54 57470 - 57607 78 45 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02410 NR:ns ## KEGG: ACICU_02410 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 45 1 45 45 72 100.0 6e-12 MYVKRDKNAVTLKMSAKYRHAKTAQNGVLAYLGFIVAMILSRNDA >gi|333032582|gb|GL891844.1| GENE 55 57620 - 57709 63 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRTISYLLAFAKFSLFIPPKQSLKRLNRP >gi|333032582|gb|GL891844.1| GENE 56 58102 - 58212 62 36 aa, chain + ## HITS:1 COG:no KEGG:A1S_2211 NR:ns ## KEGG: A1S_2211 # Name: not_defined # Def: ADP-ribose pyrophosphatase # Organism: A.baumannii # Pathway: not_defined # 2 36 110 144 144 67 94.0 2e-10 MGRDELAPISTARVTEEQIQQFFDYLESIPEATKFD >gi|333032582|gb|GL891844.1| GENE 57 58603 - 60090 1303 495 aa, chain + ## HITS:1 COG:ECs5093 KEGG:ns NR:ns ## COG: ECs5093 COG0477 # Protein_GI_number: 15834347 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 6 494 5 498 500 686 69.0 0 MRTSEKQVKPIEIDDINIIENEKTKKAITAAALGNAIEWFDFGVYGYVAYVLGKVFFPDT SPSVQMIAALATFSVPFIFRPLGGLFFGHLGDKYGRQKVLAITVIIMSISTFGIGLIPSY ETIGLWAPILLLIVKIVQGFSIGGEYSGAAIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG AATVALITHAVGEARFAEWGWRIPFFLALPLGIIGLYLRNRLEETPVYQQHSEQQAQKSK PQKFSFKEIFVKHKRSLLVCIGLVISTNVTYYMLLTYLPSYFSHNLGYSEAHGALIIIAV MVGMLFVQPVIGYLSDKFGRRPFIFIGSFSLIFLSYPAFVLLNSGVNYQIFIGLLILALS LNMSIGVMASTLPALFPTEIRYSALGIAFNFSVVIAGLTPTLTATLVETTHNLMVPAYYL MICGVVGIATAMYLKETANKPLIGGVPIAHNIEEAQELLEEFHETIEQKIENIDQKIQEL QQKRQKLADKHPDIA >gi|333032582|gb|GL891844.1| GENE 58 60516 - 60749 176 77 aa, chain + ## HITS:1 COG:no KEGG:AOLE_12435 NR:ns ## KEGG: AOLE_12435 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 77 1 77 77 118 85.0 7e-26 MEQQTLLQELNSLIEYYSKRTDCPPNRIRIGYRAYAKLMQCPPFADEVINSALDPNKRKY KKIKIKITKDDDQLEIE >gi|333032582|gb|GL891844.1| GENE 59 60807 - 61826 682 339 aa, chain - ## HITS:1 COG:PA4653 KEGG:ns NR:ns ## COG: PA4653 COG5430 # Protein_GI_number: 15599848 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Pseudomonas aeruginosa # 27 339 24 315 315 85 25.0 2e-16 MNIKTKKLLRHLCMFSGLMLTGNMAHAACSVSALGTSSISVPSIYLMENGENSSQFNSGL SCTGFSLALANMTYLKYRVEQMSNSFTNAQTGEKLNAIILDSNNEIISLGQEKDMSSFTL VNLFSGPDGNLPFYIRLPAGQSVSPGVYQADSPLKVKWFYSVPAVAIVGIGVFFESPGFR RGALGIGFNWGSGADSLGSLSITVLPDCRILAQDVNFGTAAFASKLEPVQSSMGIRCSVN TPYYVSLNNGLSPQNGNQRAMKSQTGNTFLKYDIFKNSSNDRWGSGNERWSSLNATINPG VHNGVTQQNYVFTTKIVDENADTVPAGTYQDTVTVQVEF >gi|333032582|gb|GL891844.1| GENE 60 61823 - 64321 1600 832 aa, chain - ## HITS:1 COG:PA4652 KEGG:ns NR:ns ## COG: PA4652 COG3188 # Protein_GI_number: 15599847 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, porin PapC # Organism: Pseudomonas aeruginosa # 29 826 31 782 790 510 38.0 1e-144 MILRHNNLCKSILLILLSGGCLNIPNTVFAGDLPPPPRDINEINQLFKLYLDLVVNQYSV QQVVPVIVKNDEYFIQKKKLIDELEIKIPQELLTNTDTSLSNQDVLTLGFSGDASDWISL DKLKDVSYEYQSSNQYFKLNFPPAWMPTQVLGKDSWYKPEVAQSGIGLLNNYDFYTYRPY QGGSTSSLFTEQRFFSPLGVIKNSGVYVKNHYKNEGNAESVDNDGYRRYDTSWQFDNQKN ATSFLLGDIITGSKTTWGSSVRLGGFQVQRNYSTRPDLITYPLPQFIGQAALPSTVDLII NGQKTSSTEVQSGPFILNNVPFINGKGEAVVVTTDAVGRQVTTSVPFYISNTLLKPGLFD YSLSLGKIREDYGLKNFSYGKFASAADARYGVNDWLTVEGRTELSSDLQLLGAGSVLKLA NLGVLSASFTQSKADKSMSEDRTKDLEGNQYTVGYSYNRNRFGFSINHNQRDDEYTDLSR LQYSNLISVNSNKSLTANTYFATKNSGTFGVGYINTKANDFKNRFLNLSWAPVLPTYMNG VTVSLSANRDFIEKEWSAAFQLSIPLFQRNATVNSGYAFNKQGDTGYLNFNRSVPSEGGF GVDLTRRFNENSEDLNQARVNYRNSYINTDFGLSGNHDYNYWFGLSGSLIYMAGDLFASN RLGESFALIDTNQVPDVLVRYENSLIGRSNKKGHIFVPSVTPYYSGKYSVDPIDLPSNFT ITQVEQRIAAKRGSGVVIKFPVHQSISANVYLTQADGKPVPVGSVVHRADQESSYVGMDG IVYLENLKPNNTVTVQRSDQSICKADFSVDVEQAKQQIVVVKPVTCHEVSLP >gi|333032582|gb|GL891844.1| GENE 61 64318 - 65151 638 277 aa, chain - ## HITS:1 COG:YPO1697 KEGG:ns NR:ns ## COG: YPO1697 COG3121 # Protein_GI_number: 16121957 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, chaperone PapD # Organism: Yersinia pestis # 11 241 2 225 250 150 37.0 3e-36 MVICMNNSAFIKNGILKSFLFASTLSLVTPVMAQATFLIWPIYPKIEANEKATAVWLQNT GKTDAMVQIRVFKWNQDGLKDNYSEQSEIIPSPPVAKIKAGEKHMLRLTKSANLPDGKEQ SYRLIVDELPIRLSDGNEQDASKVSFQMRYSIPLFAYGKGIGSGLTEESQKINAKNALAK PVLQWSVRNNQQGQSELYLKNNGQKFARLSALKTSKTGNDISLGKAAFGYVLSNSTVKFA IDQSTAHELAKTSKIYGVDSSGIKQELIEITKMEDPS >gi|333032582|gb|GL891844.1| GENE 62 65145 - 65663 327 172 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02417 NR:ns ## KEGG: ACICU_02417 # Name: not_defined # Def: putative type 1 pili subunit CsuA/B protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 172 1 172 172 308 100.0 8e-83 MKYLYFKAIFLLSVSQFIYAADPQLNSSFKVQAKIENGCSIDNIEQNMDFGKYSALSKNK VMTNVINSKGSWNIRCTESLPVSISIDGGENLQNNTRRMKNSSSPNYLSYKLYNSSSLSN EYIVGNKYLLPATTPTNRLANFEIYGVVDLENNNEPHAAGIYKDTVSIMITW >gi|333032582|gb|GL891844.1| GENE 63 65669 - 66217 443 182 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1320 NR:ns ## KEGG: ABAYE1320 # Name: not_defined # Def: protein CsuA # Organism: A.baumannii_AYE # Pathway: not_defined # 1 182 11 192 192 294 97.0 1e-78 MIFNRGSAFIISYFLISLLNAGEIGAKLTSQIELLPSCSINNNVVENNAANLNFGTIDFG EATTGFKGVLEASLVNNGNSGFKIECAGISTVKIIFGAGNNDSNIPASFSQNYYHALSNG KDFIAYNLLYGLNKQVIKANEAFILNDMNNKKNIDIFGQAAHDGSRISKGEYKDIVPITI EF >gi|333032582|gb|GL891844.1| GENE 64 66292 - 66828 597 178 aa, chain - ## HITS:1 COG:PA4648 KEGG:ns NR:ns ## COG: PA4648 COG5430 # Protein_GI_number: 15599843 # Func_class: S Function unknown # Function: Uncharacterized secreted protein # Organism: Pseudomonas aeruginosa # 23 176 25 180 182 73 38.0 2e-13 MKNIQKSLLAALIVAGYAVNTQAAVTGQVDVKLNISTGCTVGGSQTEGNMNKFGTLDFGK TSGTWNNVLTAEVASAATGGNISVTCDGTDPVDFTVAIDGGERTDRTLKNTASADVVAYN VYRDAARTNLYVVNQPQQFTTVSGQATAVPIFGAIAPNTGTPKAQGDYKDTLLVTVNF >gi|333032582|gb|GL891844.1| GENE 65 67411 - 68049 297 212 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02421 NR:ns ## KEGG: ACICU_02421 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 212 1 212 212 359 100.0 3e-98 MIKIDTFDTMQIKKSFTTLKGQERIKQILRNAEIVFLTKGYSGFSMRGVATQSNISLSTL QHYFQNKDILLKALLNKLICDYIQRIEILINLNANEPPLIRFMNIITNIIYEIEQPIITN AFKEFFSISDHLPYVYEALSIIQKYNLELIYKIILPIHNKISSEEYKERAIIIITQLNGY LVQHSNKNTDESYKEFLRSILLKNILRLVSEP >gi|333032582|gb|GL891844.1| GENE 66 68118 - 68309 190 63 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02422 NR:ns ## KEGG: ACICU_02422 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 63 1 63 63 106 100.0 3e-22 MIVSNNFAVPYYLNVRKEKGMTAYYWATHQSQLALFDSYELAYRFYFPSRHILIRSEIKA FAQ >gi|333032582|gb|GL891844.1| GENE 67 68315 - 69028 597 237 aa, chain - ## HITS:1 COG:BMEI1373 KEGG:ns NR:ns ## COG: BMEI1373 COG2186 # Protein_GI_number: 17987656 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Brucella melitensis # 2 226 1 224 225 135 33.0 5e-32 MIEQIQKRSLVDEVIHVIRQNIKNDIWKVDEKIPTEPELVQGLGVGRNTIREAIKILEYL GVLEVKQGLGTFVRTKNDFSIVINSIHHSDLYEHVEVRCLLEIEIAKLAARHCTPENMRD VIACLEDRAATNQQDVANFMLSDKKLHLAIAKATHNKALQATYEYFLNSSYQYTLELVTN KNLPDPNQQIHTELVQAIQHKSESEAMRIAESMLAPILRSLDSIKADFVQNHLDQIL >gi|333032582|gb|GL891844.1| GENE 68 69125 - 70027 891 300 aa, chain + ## HITS:1 COG:RSc2832 KEGG:ns NR:ns ## COG: RSc2832 COG2607 # Protein_GI_number: 17547551 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Ralstonia solanacearum # 38 285 32 282 294 240 48.0 2e-63 MELSQTISNLIFEIQKLTQAVEKISKTQEISVDVLDEAIAFRWERENNKGSLVAIRKPQL ISFNHLCNIDSQLNKVKLNTEAFAKGLLANNVLMTGSRGTGKSSIVKACLNEYHHLGLRV IELEKKYLEDLPKIINLLQDRTERFIIFCDDLAFEAGDSSYATLKTVLDGSLASSSDNTL IYATSNRKHMVAEYNKDNTELNVGENGELRPGDSIEQKISLADRFGLQINFYGFSQQEYL KTVQYWLNEYKWQQRETWETIQLKAIQYATQQGNRSGRIANQFAKMIVGQEMLSAADLTV >gi|333032582|gb|GL891844.1| GENE 69 70079 - 71314 1420 411 aa, chain - ## HITS:1 COG:NMA0183 KEGG:ns NR:ns ## COG: NMA0183 COG0786 # Protein_GI_number: 15793211 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Neisseria meningitidis Z2491 # 1 409 1 401 404 459 61.0 1e-129 MEFVFNGFYTLISAVIVLLLGRFLVNRIDFLKRYNIPEPVAGGLVAAVVSLLVHTFWGYS IVFSSELQTSFMLVFFASIGLSANFMKLKEGGTALVIFLICVASFIVVQNAVGMSLATLL GLDPLIGLIAGSITLTGGHGTAGAWGEILESQHGIQGALALGMASATFGLIIGGVIGGPL AKLLINRYSLAQAKTNAEIQQRDTHVEQNSDDLAPFENPHQVRLITADNAITTLGMFAAC LAFAEFMTGFSKGTWFELPTFVWALGGGVILRNILESVLKVDIFDRAIDVFGNASLSLYL AMALLSLKLWQLADLAGPLVVILGAQTLTMALYAAFVTFRVMGKNYDAAVLAAGHCGFGM GATPTAVANMQAITNMYGPSHKAFLIVPLCGAFFVDLINATVIQLMLKFIA >gi|333032582|gb|GL891844.1| GENE 70 71675 - 72823 872 382 aa, chain + ## HITS:1 COG:slr1830 KEGG:ns NR:ns ## COG: slr1830 COG3243 # Protein_GI_number: 16330022 # Func_class: I Lipid transport and metabolism # Function: Poly(3-hydroxyalkanoate) synthetase # Organism: Synechocystis # 50 380 55 377 378 107 25.0 3e-23 MSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKH EIISLRHYRNETEASAKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWG VPTRNQAKYNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIK NLIILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFK LTDPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELST GVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPGGHMGVV SGSQAPTSVWPEMSNWLATRSD >gi|333032582|gb|GL891844.1| GENE 71 72981 - 73817 624 278 aa, chain + ## HITS:1 COG:PA2917 KEGG:ns NR:ns ## COG: PA2917 COG2207 # Protein_GI_number: 15598113 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 2 278 3 278 278 287 47.0 1e-77 MSSNWVDISKDTNTGIETIRAHFTGHAYDPHWHSSYLIGVTESGIQQFHCRKKQINSHAG QVFMLEPEEIHDGHAPASDGFTYQMLYLHPEWLKQRLQGLFHNSPDHYELVIDAPLKSDD QLAIITSQAFRHLHYKEMNIVKDNSLDVLIQYIAQGKWLKKASQSSCIHVPQIAHQIRDI LHDHLFEDIGLKDISRMVGLDRYHIHRIFKSTFHLAPHQYLIQLRLTRARDLLARSISPA QVASDLCFSDQSHLSRWFKRCYELTPAAYRKICTNLQD >gi|333032582|gb|GL891844.1| GENE 72 73868 - 74473 402 201 aa, chain + ## HITS:1 COG:PA2306 KEGG:ns NR:ns ## COG: PA2306 COG1280 # Protein_GI_number: 15597502 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 4 194 8 196 205 116 37.0 3e-26 MENLTAFSLFAIVASITPGPTNFIILSLSSHYKISKTLPVILGSCIGAALLVLVVGIGLG STILAYPVIQKIMTWSGLIWLTVLAWKLYNYNPVISLEKNEQYPPIGFKAAFLMQAINPK TWMMAFAVISVYTKQGQDILINVSILSCIFLLIAFPCLYLWALVGRLSTRLLSKPKHINI FNKIMAIILLASVWWPMLPRF Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:46:36 2011 Seq name: gi|333032581|gb|GL891845.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld60, whole genome shotgun sequence Length of sequence - 97849 bp Number of predicted genes - 92, with homology - 89 Number of transcription units - 51, operones - 19 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 115 - 145 0.3 1 1 Tu 1 . - CDS 166 - 1443 1482 ## COG2873 O-acetylhomoserine sulfhydrylase - Prom 1585 - 1644 5.3 + Prom 1629 - 1688 6.5 2 2 Tu 1 . + CDS 1742 - 3403 2166 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 3423 - 3451 1.0 - Term 3410 - 3438 1.0 3 3 Tu 1 . - CDS 3446 - 3826 488 ## ACICU_03418 hypothetical protein - Prom 4060 - 4119 11.6 + Prom 3893 - 3952 4.9 4 4 Tu 1 . + CDS 4057 - 4176 75 ## - Term 4102 - 4153 1.1 5 5 Tu 1 . - CDS 4169 - 4861 609 ## ACICU_03416 putative lipoprotein - Prom 4937 - 4996 3.7 + Prom 4922 - 4981 6.0 6 6 Op 1 . + CDS 5049 - 5408 210 ## ABSDF0262 putative component of the czc cation-efflux system (CzcI) 7 6 Op 2 . + CDS 5464 - 5658 145 ## gi|239501992|ref|ZP_04661302.1| hypothetical protein AbauAB_06725 8 6 Op 3 . + CDS 5655 - 6266 218 ## COG2020 Putative protein-S-isoprenylcysteine methyltransferase + Prom 6307 - 6366 5.7 9 7 Tu 1 . + CDS 6402 - 6584 134 ## gi|293610686|ref|ZP_06692986.1| predicted protein + Term 6585 - 6653 7.8 + Prom 6646 - 6705 5.7 10 8 Op 1 . + CDS 6848 - 7174 187 ## ABSDF0262 putative component of the czc cation-efflux system (CzcI) 11 8 Op 2 13/0.000 + CDS 7232 - 8641 1045 ## COG1538 Outer membrane protein 12 8 Op 3 11/0.000 + CDS 8641 - 9849 1359 ## COG0845 Membrane-fusion protein 13 8 Op 4 . + CDS 9839 - 12997 2835 ## COG3696 Putative silver efflux pump + Term 13017 - 13060 2.2 + Prom 13041 - 13100 4.2 14 9 Tu 1 . + CDS 13130 - 14086 1115 ## COG1230 Co/Zn/Cd efflux system component - Term 14056 - 14099 9.2 15 10 Tu 1 . - CDS 14105 - 14443 304 ## ABBFA_000300 hypothetical protein - Prom 14463 - 14522 8.2 + Prom 14555 - 14614 7.1 16 11 Tu 1 . + CDS 14717 - 15664 925 ## ABBFA_000301 hypothetical protein + Term 15678 - 15712 2.1 - TRNA 15757 - 15832 56.4 # Glu TTC 0 0 - TRNA 15861 - 15936 56.4 # Glu TTC 0 0 17 12 Tu 1 . - CDS 16071 - 16817 521 ## ABAYE0275 hypothetical protein - Prom 16994 - 17053 6.4 - Term 17025 - 17055 1.2 18 13 Tu 1 . - CDS 17074 - 18492 1302 ## COG0833 Amino acid transporters - Prom 18518 - 18577 4.9 - TRNA 18624 - 18699 56.4 # Glu TTC 0 0 - TRNA 18725 - 18800 83.5 # Ala GGC 0 0 - Term 18709 - 18738 0.1 19 14 Tu 1 . - CDS 18858 - 20366 1591 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 20390 - 20449 8.8 20 15 Tu 1 . - CDS 20483 - 20782 301 ## ABBFA_000309 hypothetical protein - Prom 20815 - 20874 5.7 + Prom 21009 - 21068 7.6 21 16 Tu 1 . + CDS 21179 - 22180 1025 ## COG1613 ABC-type sulfate transport system, periplasmic component + Term 22245 - 22281 1.0 + Prom 22183 - 22242 4.8 22 17 Op 1 . + CDS 22403 - 23326 1034 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 23 17 Op 2 . + CDS 23326 - 23658 287 ## AOLE_01435 cell division protein 24 17 Op 3 26/0.000 + CDS 23670 - 25502 1973 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 25 17 Op 4 26/0.000 + CDS 25506 - 27005 1567 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 26 17 Op 5 28/0.000 + CDS 27014 - 28414 1329 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 27 17 Op 6 . + CDS 28415 - 29533 1365 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Term 29558 - 29585 0.1 28 17 Op 7 . + CDS 29594 - 29926 410 ## ABAYE0286 hypothetical protein 29 17 Op 8 . + CDS 29929 - 30753 876 ## COG0500 SAM-dependent methyltransferases - Term 30733 - 30760 0.1 30 18 Tu 1 . - CDS 30771 - 33251 2570 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein - Prom 33415 - 33474 7.3 + Prom 33402 - 33461 6.6 31 19 Op 1 8/0.000 + CDS 33489 - 34547 990 ## COG4972 Tfp pilus assembly protein, ATPase PilM 32 19 Op 2 6/0.100 + CDS 34547 - 35188 595 ## COG3166 Tfp pilus assembly protein PilN 33 19 Op 3 6/0.100 + CDS 35185 - 35925 362 ## COG3167 Tfp pilus assembly protein PilO 34 19 Op 4 6/0.100 + CDS 35936 - 36463 398 ## COG3168 Tfp pilus assembly protein PilP 35 19 Op 5 8/0.000 + CDS 36531 - 38696 2229 ## COG4796 Type II secretory pathway, component HofQ 36 19 Op 6 20/0.000 + CDS 38708 - 39277 751 ## COG0703 Shikimate kinase 37 19 Op 7 . + CDS 39306 - 40388 1123 ## COG0337 3-dehydroquinate synthetase 38 19 Op 8 . + CDS 40404 - 41279 762 ## ACICU_03387 hypothetical protein + Term 41335 - 41374 1.1 39 20 Op 1 21/0.000 + CDS 41734 - 46215 4944 ## COG0069 Glutamate synthase domain 2 40 20 Op 2 . + CDS 46285 - 47706 1556 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 47733 - 47773 8.3 + Prom 47711 - 47770 7.5 41 21 Tu 1 . + CDS 47882 - 48769 714 ## COG3687 Predicted metal-dependent hydrolase + Term 48777 - 48806 1.4 + Prom 48779 - 48838 4.7 42 22 Op 1 8/0.000 + CDS 48900 - 49490 838 ## COG1704 Uncharacterized conserved protein 43 22 Op 2 5/0.100 + CDS 49512 - 50594 1090 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 44 22 Op 3 . + CDS 50588 - 51148 478 ## COG3762 Predicted membrane protein + Prom 51199 - 51258 4.4 45 23 Op 1 . + CDS 51490 - 51924 628 ## COG4969 Tfp pilus assembly protein, major pilin PilA + Term 51942 - 51971 0.5 46 23 Op 2 . + CDS 51982 - 53292 598 ## ACICU_03379 hypothetical protein + Prom 53313 - 53372 8.2 47 24 Tu 1 . + CDS 53400 - 55028 1129 ## COG3307 Lipid A core - O-antigen ligase and related enzymes + Term 55035 - 55066 3.4 - Term 55013 - 55062 11.2 48 25 Op 1 9/0.000 - CDS 55070 - 55534 664 ## COG2193 Bacterioferritin (cytochrome b1) - Prom 55584 - 55643 4.3 - Term 55543 - 55579 2.6 49 25 Op 2 . - CDS 55779 - 55973 341 ## COG2906 Bacterioferritin-associated ferredoxin - Prom 56000 - 56059 6.9 50 26 Tu 1 . - CDS 56183 - 56566 573 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 56588 - 56647 4.4 - Term 56590 - 56633 9.9 51 27 Op 1 18/0.000 - CDS 56687 - 58792 1847 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 58909 - 58968 6.7 - Term 58934 - 58987 7.3 52 27 Op 2 25/0.000 - CDS 59000 - 59278 379 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 53 27 Op 3 . - CDS 59351 - 59980 710 ## COG0194 Guanylate kinase - Prom 60013 - 60072 4.1 + Prom 59953 - 60012 3.7 54 28 Tu 1 . + CDS 60103 - 61053 465 ## PROTEIN SUPPORTED gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P + Term 61093 - 61134 7.1 + Prom 61122 - 61181 11.3 55 29 Op 1 . + CDS 61223 - 61696 322 ## ABBFA_000342 prepilin-type N-terminal cleavage/methylation domain protein 56 29 Op 2 . + CDS 61696 - 62250 397 ## ABAYE0315 type IV fimbrial biogenesis protein 57 29 Op 3 . + CDS 62251 - 63252 965 ## ABBFA_000343 prepilin-type N-terminal cleavage/methylation domain protein 58 29 Op 4 . + CDS 63249 - 64067 576 ## ABBFA_000344 hypothetical protein + Prom 64074 - 64133 1.8 59 30 Op 1 . + CDS 64160 - 67933 3435 ## COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 60 30 Op 2 . + CDS 67946 - 68428 333 ## ACICU_03365 pilin like competence factor 61 30 Op 3 . + CDS 68425 - 68850 398 ## COG4968 Tfp pilus assembly protein PilE + Prom 68864 - 68923 3.0 62 31 Op 1 12/0.000 + CDS 68952 - 69248 492 ## PROTEIN SUPPORTED gi|193078541|gb|ABO13561.2| 30S ribosomal protein S16 63 31 Op 2 30/0.000 + CDS 69268 - 69816 175 ## PROTEIN SUPPORTED gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 64 31 Op 3 33/0.000 + CDS 69862 - 70602 754 ## COG0336 tRNA-(guanine-N1)-methyltransferase + Term 70640 - 70677 -1.0 + Prom 70620 - 70679 9.6 65 31 Op 4 . + CDS 70739 - 71179 723 ## PROTEIN SUPPORTED gi|158517003|gb|ABW70206.1| 50S ribosomal protein + Term 71192 - 71234 6.2 - Term 71186 - 71214 1.0 66 32 Op 1 3/0.100 - CDS 71232 - 72206 901 ## COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold - Prom 72226 - 72285 2.2 67 32 Op 2 . - CDS 72288 - 73322 920 ## COG5380 Lipase chaperone - Prom 73400 - 73459 4.3 + Prom 73334 - 73393 5.8 68 33 Op 1 . + CDS 73476 - 74381 745 ## COG0130 Pseudouridine synthase 69 33 Op 2 . + CDS 74401 - 75177 764 ## COG0730 Predicted permeases + Term 75184 - 75236 11.9 + Prom 75180 - 75239 8.7 70 34 Tu 1 . + CDS 75387 - 75830 563 ## ABSDF0335 hypothetical protein 71 35 Op 1 . - CDS 75838 - 76698 794 ## COG5006 Predicted permease, DMT superfamily - Prom 76718 - 76777 5.7 72 35 Op 2 . - CDS 76790 - 77674 589 ## COG5006 Predicted permease, DMT superfamily - Prom 77705 - 77764 7.6 - Term 77711 - 77766 3.3 73 36 Tu 1 . - CDS 77773 - 79005 1256 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 79092 - 79151 5.0 + Prom 79147 - 79206 5.6 74 37 Op 1 . + CDS 79385 - 80794 1650 ## COG0277 FAD/FMN-containing dehydrogenases + Term 80838 - 80886 5.8 + Prom 80804 - 80863 2.9 75 37 Op 2 . + CDS 80889 - 81257 268 ## ACICU_03350 hypothetical protein + Term 81261 - 81305 5.4 76 38 Op 1 4/0.100 - CDS 81303 - 81617 430 ## COG1359 Uncharacterized conserved protein 77 38 Op 2 . - CDS 81631 - 82218 759 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 82349 - 82408 3.9 78 39 Tu 1 . + CDS 82217 - 82324 57 ## + Prom 82356 - 82415 3.4 79 40 Tu 1 . + CDS 82443 - 82808 286 ## ABAYE0337 signal peptide 80 41 Tu 1 . + CDS 83178 - 84407 1020 ## COG0477 Permeases of the major facilitator superfamily + Term 84413 - 84446 4.0 - Term 84401 - 84434 4.0 81 42 Tu 1 . - CDS 84444 - 86594 1511 ## COG1289 Predicted membrane protein - Prom 86726 - 86785 6.5 - Term 86728 - 86776 8.5 82 43 Op 1 . - CDS 86788 - 87363 797 ## COG2032 Cu/Zn superoxide dismutase - Prom 87393 - 87452 4.8 83 43 Op 2 . - CDS 87479 - 88597 1170 ## COG0628 Predicted permease - Prom 88628 - 88687 5.5 84 44 Tu 1 . - CDS 88720 - 89364 719 ## COG1192 ATPases involved in chromosome partitioning - Prom 89392 - 89451 6.0 + Prom 89317 - 89376 5.4 85 45 Tu 1 . + CDS 89523 - 89990 503 ## COG4741 Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase + Prom 89992 - 90051 6.8 86 46 Tu 1 . + CDS 90130 - 90693 570 ## ABBFA_000371 hypothetical protein + Term 90703 - 90734 3.1 - Term 90684 - 90727 6.3 87 47 Op 1 . - CDS 90743 - 91276 608 ## ACICU_03339 hypothetical protein 88 47 Op 2 . - CDS 91292 - 92086 511 ## COG0500 SAM-dependent methyltransferases - Prom 92130 - 92189 4.1 + Prom 92071 - 92130 5.1 89 48 Tu 1 . + CDS 92214 - 93491 1135 ## ACICU_03337 hypothetical protein + Term 93510 - 93551 9.2 + Prom 93845 - 93904 11.0 90 49 Tu 1 . + CDS 93995 - 95338 1046 ## COG0833 Amino acid transporters + Term 95367 - 95400 2.9 91 50 Tu 1 . - CDS 95574 - 95729 95 ## - Prom 95773 - 95832 9.0 + Prom 96257 - 96316 4.6 92 51 Tu 1 . + CDS 96362 - 97633 1738 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 97662 - 97719 1.1 Predicted protein(s) >gi|333032581|gb|GL891845.1| GENE 1 166 - 1443 1482 425 aa, chain - ## HITS:1 COG:PA5025 KEGG:ns NR:ns ## COG: PA5025 COG2873 # Protein_GI_number: 15600218 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pseudomonas aeruginosa # 4 414 2 412 425 615 71.0 1e-176 MTYKDETLAIHAGYTPEATTKAVAVPIYQTTSYAFDNTQHGADLFDLKVQGNIYTRIMNP TTAVLEQRLAALEGGIGALALASGMAAITYAVQTITEAGDNIASVSTLYGGTYNLFAHTL PKQGIEVRFFDYQKPESLRNLIDDKTKLVFVESIGNPLGNIIDLEEISKIAHEYGVPVVV DNTVATPALLKPFQYGADIVIHSLTKYIGGHGNSIGGAIIDSGKFPWGKYPERFKVLNTP DPSYHGVNYVEALGEAAYIARARVVPLRNTGAAISPLSVFLILQGLETLNLRMERHTENA QRIAEYLQNHPKVKWVNYAGLKDHPQHQLAQKYVKGKPSAILSFGVQDGREGGTRFIDAL QLFTRLVNIGDAKSLACHPATTTHRQLNEQELKAAGVSEDMVRLSIGIEHVDDLIADLEQ ALSSV >gi|333032581|gb|GL891845.1| GENE 2 1742 - 3403 2166 553 aa, chain + ## HITS:1 COG:STM4581 KEGG:ns NR:ns ## COG: STM4581 COG0488 # Protein_GI_number: 16767822 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Salmonella typhimurium LT2 # 1 552 1 554 555 814 71.0 0 MAQYIYTMNRVSKMVPPKREILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKDFS GEARAQPGIKIGYLEQEPPLDPTKDVRGNVEDGVREALDALERLDQVFAEYADPDADFDA LAKEQEKLESIIHAWDAHNLNNQLEIAADALNLPAWDADVTKLSGGERRRVALCRLLLSK PDMLLLDEPTNHLDAESVSWLERFLKDFPGTIVAITHDRYFLDNVAEWILELDRGHGIPY QGNYTSWLEQKNARLEQEQKQEESFAKALKKELEWVRQNAKGQQKKNKARMERFEELNSR EFQQRNETSEIYIPPGPRLGNKVVEVENISKSFGDRLLYENLSFTVPPAAIVGIVGPNGA GKTTLFRMMTGEQKPDTGTVTLGDSVKVAYVGQIRDTLDDNKTVWEEVSGGLDILKVGDY EIASRAYIGRFNFKGQDQQKRVGELSGGERNRLQLAKILQQGANVILLDEPSNDLDVETL RALEDAILVFPGTVMVVSHDRWFLDRIATHILSFEDEQPEFYTGNYTEFEAYRRAKLGDD AQPHRKKYKKISG >gi|333032581|gb|GL891845.1| GENE 3 3446 - 3826 488 126 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03418 NR:ns ## KEGG: ACICU_03418 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 126 1 126 126 247 100.0 1e-64 MNMKTIKHGLNHLFAFENLPADMHSQAEDEIEQGLRFEELAIQDHERMQNWLDITPNDRN AMWCYLRAALRGNADASFKLGIGYLNGQFGLDKNYTEAEKWLNKAASQGHPDAERCLQEA FSKLAF >gi|333032581|gb|GL891845.1| GENE 4 4057 - 4176 75 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIIQNKKIEKIYKYQTKEIFLNKTSLRAGFVFRLVRVLI >gi|333032581|gb|GL891845.1| GENE 5 4169 - 4861 609 230 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03416 NR:ns ## KEGG: ACICU_03416 # Name: not_defined # Def: putative lipoprotein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 230 1 230 230 427 98.0 1e-118 MYKTLTTCLLVTCLGLSGCATSILSTALPNETTEVQTTILKTDQIIVLGQAIKNQQEQGV VFIGQDFNYLMTEGSSEFLNIIKNIPVNQRTLIIPSPLLLEMDDPTHFHGELKFQYNIPA SKLSDQQKENLKNLGFKNHFMVMENQTQLLYPYAIIRFKGQIYQTSPTLKVQQTIPTPYP IALQQKDEITKKHPFKRVTRMALYPLAMAFDIVTVAPSLILSDLRGDFTK >gi|333032581|gb|GL891845.1| GENE 6 5049 - 5408 210 119 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0262 NR:ns ## KEGG: ABSDF0262 # Name: not_defined # Def: putative component of the czc cation-efflux system (CzcI) # Organism: A.baumannii_SDF # Pathway: not_defined # 1 119 26 144 144 186 99.0 4e-46 MLIFQSLWNIAAAFCAHENQEKALHHFGHHAALNVYQTSSHTHVEHTETLDAAHKAPLNL QDHHDHLPTCFHVVMTEVAKQAQTPVLHVHELSQIYHWSNSYQSPHLSALKPPPVLTPL >gi|333032581|gb|GL891845.1| GENE 7 5464 - 5658 145 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|239501992|ref|ZP_04661302.1| ## NR: gi|239501992|ref|ZP_04661302.1| hypothetical protein AbauAB_06725 [Acinetobacter baumannii AB900] conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 64 1 64 64 115 100.0 1e-24 MLNYMCKQSAAIFYVDYSLKHSRLYVNDKAGYKVLSNFSGTQKYHFNESVILSLMIHSDG GLWK >gi|333032581|gb|GL891845.1| GENE 8 5655 - 6266 218 203 aa, chain + ## HITS:1 COG:mll5060 KEGG:ns NR:ns ## COG: mll5060 COG2020 # Protein_GI_number: 13474221 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative protein-S-isoprenylcysteine methyltransferase # Organism: Mesorhizobium loti # 39 200 44 205 208 100 33.0 2e-21 MNILFTPRVRTVSSRVIGLILAIILALSFSKWHFQAAFIEHILWFFGWFFVGIGVMGRIW CSLYISGFKNAKLVTDGPYSLCRNPLYLFSYLGGVGIMLITETFIFPIVFTLYFLCYYHF VIRQEEAFLSEKYGTAYSDYIKTIPRFLPSFKNFKEPEFYQVSPKHFRIFLTQVVWFIWV AALVQLFDELRLHGVLPSLFSWF >gi|333032581|gb|GL891845.1| GENE 9 6402 - 6584 134 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|293610686|ref|ZP_06692986.1| ## NR: gi|293610686|ref|ZP_06692986.1| predicted protein [Acinetobacter sp. SH024] predicted protein [Acinetobacter sp. SH024] # 1 60 1 60 60 85 93.0 2e-15 MIIMSIKLNTKSALMVLLLSTSLAHADGGLIFLEKNLKSQQETKAKAEEGKKPHLTCKHK >gi|333032581|gb|GL891845.1| GENE 10 6848 - 7174 187 108 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0262 NR:ns ## KEGG: ABSDF0262 # Name: not_defined # Def: putative component of the czc cation-efflux system (CzcI) # Organism: A.baumannii_SDF # Pathway: not_defined # 1 108 35 144 144 114 62.0 1e-24 MAAAFCAHENQEKALHHFGHHAALSYEASQHSHTEKTDIAGTHKAPLNLSDHHDHLPSCF HVVIVEAQEKIVSPLIQSSEPKQQYYWSNSYKSPHISKQDPPPVLTLL >gi|333032581|gb|GL891845.1| GENE 11 7232 - 8641 1045 469 aa, chain + ## HITS:1 COG:PA2522 KEGG:ns NR:ns ## COG: PA2522 COG1538 # Protein_GI_number: 15597718 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Pseudomonas aeruginosa # 56 433 41 418 428 79 24.0 2e-14 MSIFLYKKSFVSLSTSWVLKSLVVAVALSTGVVTNAASSNQNLAENTQLQRVQNVLTFEQ VLDQVKQFQTQTGIWQTQQDIAESNIKQSQLWENPTVSVQQTGFKSGKDQELELGISQKL DIFGVRSAAKKLASVQQNQVELNQVLYEAQLKLAVKYLWSQVSILELEHEVAKAQLRTSK NLLDATRLRFQAGSIAQVDLDRTLMTHVENQRLYQEVELSLSSAKRKLANLWGETEDNFT LRPDIKSTWPLKNESDIDQYLKQNLLEQSLRLQAIQQNSEINYLKAKNRPTPTVNMGVVR SKTAETSSTENQIRVGIAVPLNIFNRQQYALKVAQSKLDLIDQQQSFYKKQSENSIRTLQ YELAGLKQQYNLMNEQQIPLSETVQEKMLLGFKVGKFAITDVQQSTLQLQEQRLKKVQLL KSAWQKAIEAESLALGIDPNMVMSGDALNQINQNLWQDTYQLPTVGGAE >gi|333032581|gb|GL891845.1| GENE 12 8641 - 9849 1359 402 aa, chain + ## HITS:1 COG:PA2521 KEGG:ns NR:ns ## COG: PA2521 COG0845 # Protein_GI_number: 15597717 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Pseudomonas aeruginosa # 30 402 114 484 484 182 32.0 7e-46 MSVKKMKNQWLIAILLLIVCLALSAWLFFSGKKQPNTEKSEEAHAEGEAGHEESEKEEGS LNLTSKQLVEYGVKLEQVGRGEVEQNLSYPAKLVVNTDQQAHVSSTFSARVDSVNVALGQ QVEKGQALATLFVPDLVDQQANLSMAQEALTLAQQDYQREKQLWEQGVSARQDYQRAYNA YRQAQIQVQAANSRLSALGANRSSKGRYVLTAPLSGVISSKDIVIGEQIGPEKQLFVIDR LDQLWIEFVLPSANTNIQPNQEIEFKSLQTNNIFKAQVQSLTSEADTQTGRLQVRAKVLT PSKELRPNLMVNVLLKQNNAATVLRVNKTAIQQIDGKNVVFIAKQEKDKIHFAPVAVELG NYSSDAQWVEVKSGITEKQQYVTQGSFLLKSELEKGEAEHGH >gi|333032581|gb|GL891845.1| GENE 13 9839 - 12997 2835 1052 aa, chain + ## HITS:1 COG:RSp0493 KEGG:ns NR:ns ## COG: RSp0493 COG3696 # Protein_GI_number: 17548714 # Func_class: P Inorganic ion transport and metabolism # Function: Putative silver efflux pump # Organism: Ralstonia solanacearum # 14 1039 1 1034 1064 1209 60.0 0 MDINKPDLPKAEGLFDRIIQFSINNAIWVMMFVIAWIGVGIYSYQKLSIDAVPDITNVQV QINSQANGFTAPEVEQRITYPIENAMSGIPNLEQTRSISRYGLSQVTIIFKDGTDIYWAR QLINQRLQEAKSALPDSIDPQMSPISTGLGEIYQWVVKAEPNAKKADGSAYSAMDLREIQ DWIIRPQLQRVQGVAEVNSIGGYNKTYVVSPDLTRLQQLQIPLTDLQDALQNNNENRGAG FIEENGQQLTVRVPGMLMSIQDIQNVTVATKNGLPIRVADVASVSIGHDLRTGGATYNGQ ETVLGIAMMMMGENSKTIAKAIDDKVQEIQRSLPQGVVIETVYDRSSLVDKAIKTVAKNL IEGAILVIVILFIFLGNFRAALITACIIPLAMLFTLTGMAEQKISANLMSLGALDFGIIV DGAVVIVENCIRRLAEAQHLKGRLLTRSERFTEVFLAAKQARRPLIFGQIIIMVVYLPIF ALAGVEAKMFHPMAMTVVLALLGAIILSVTFVPAAVALFITCEVKEKESRWMMTLKKGYA GLLDKAYAFRYVVVTAAVSILILTSAIATRVGSEFAPQLSEGDFALQLMRAPSTGIEESL KIQENVEKQLLKAFPEIKAIFARTGTAEVATDVMPPNISDGIVLLKPHDQWPNPKETIDE LRTRMLQFVNQIPGNNSEFSQPIELRFNELISGVRSDIGVKVFGDDMQVLNQEAEKIAQQ LRSIPGASEVKVEQTDGLPLLNVDVNHALAAQYGLSVKSIQDIVAASIGGQSVGQILQGD RRFDFVIRLQENMRTPQQLAQLPIRLPNGGLIQLQDVAKVENILGLAQVSRENGKRRVIV TANVRDRDLGSFVQEMQSKLAQQKLPSGYWLGYGGQFENLASATARMQIVVPMALIMIFV LLMAVFSNFKDSLLVFSGVPFALSGGLVALWLRDIPLSMSAGVGFIALSGVAVLNGLVML TFIKELRATLDVHAATWKGAVLRLRPVLMTAFVASLGFIPMALATGTGAEVQRPLATVVI GGIISSTILTLVLLPVIYRWMNEDKTKSVEHS >gi|333032581|gb|GL891845.1| GENE 14 13130 - 14086 1115 318 aa, chain + ## HITS:1 COG:PA0397 KEGG:ns NR:ns ## COG: PA0397 COG1230 # Protein_GI_number: 15595594 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Pseudomonas aeruginosa # 6 292 4 289 299 286 56.0 3e-77 MGGHHGHDHSHAVVTEGNAKKLTIALALTTTFLIVEVIAGLITQSLALLSDAAHMFTDAA ALAIALVAIQISKRPADNKRTFGYQRFEILAALFNALMLFVVAIYILYEAYIRFSQPPEI QSVGMLIVATIGLVINLISMKILMSSANNSLNVKGAYLEVLSDALGSVGVIIGAIIIYFT NWYWIDTLIAVLIGFWVLPRTWVLLKQSINILLEGVPEEVDIEKLRADLLSLNGVESIHQ LKVWAITSKNIHLTVHLFAPEADRNKLYQDAVEMLSHEHGIGEVTLQIEDDAEINCQHIA QHASHEHNDNDKTHSHQH >gi|333032581|gb|GL891845.1| GENE 15 14105 - 14443 304 112 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000300 NR:ns ## KEGG: ABBFA_000300 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 112 1 112 112 197 100.0 9e-50 MQYRCPQCQSVKIMPVSQGVNSAKPVVPKSLVILVPAIFVLLLLVVISIFMWIFGNGAGS SLQIATVVAFVVTVGAGFMFWRDLPDFKLSMQAFMQSQKHWKCRDCNHEWEI >gi|333032581|gb|GL891845.1| GENE 16 14717 - 15664 925 315 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000301 NR:ns ## KEGG: ABBFA_000301 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 315 1 315 315 615 100.0 1e-175 MGQEDDNKSKPTTTSTVSGNPDPIKLSFSRRLLHKTLQHAQDAVGFASDTTRNLAEVADA ALDALDQVTSHTKRGVVGMTNLAAGTVRDMVSETSETARQVALIMARTFLGKSTLNLYLP EMLLNSQIRKRIDRSEIDDIKVQCGNDRFQVEIDGHYHRFLYRLSLDFRVLECRIGQEKF LRLRQMDESLDVQIRHGGTLSNWAVRRIGRVGFEVINMLPIPSLINHLIRDIPGIQRDGH RMWFIDLEQAGFIDFINNRSWMVEKLLNLTDFSILPGLNILRESRELVQQLVDQFEIKGL RVQSGRLEVQVGIAN >gi|333032581|gb|GL891845.1| GENE 17 16071 - 16817 521 248 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0275 NR:ns ## KEGG: ABAYE0275 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 248 72 319 319 462 99.0 1e-129 MPFYGDLMTKYQLSNQLDLNTLLPKTFNFHLPIHLHHQPSTPKEHTPFIPHLPLSPDQPA QSLSERLYLTSQMVKDRVLKEMVVLLNNFPKLHESLIQQFLIETYMYLSNPDFMYEVHQR ILKQMHDDEDCIVVAHSLGSVIAYHLLSDPSYQFSVQRFITLASPLSFRVIQSKLPTPIE RPKCLKGDWYNFYSKDDFLTAFPLSEAPFNFTPPIINQEIFTFANQPHEIVGYLQHHAVV KTIIEPFQ >gi|333032581|gb|GL891845.1| GENE 18 17074 - 18492 1302 472 aa, chain - ## HITS:1 COG:ykfD KEGG:ns NR:ns ## COG: ykfD COG0833 # Protein_GI_number: 16128245 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli K12 # 11 466 10 460 475 488 54.0 1e-137 MQPSDKQLDAQHQNSTAPLKRAMSTRHLVMLSLGGAIGTGLFLGSGEVISQTGPIGAIIA YILGGAIAYMVMLCLGELAVHMPVSGSFGAYARKYISPSTGYMISWMYWLTWTATLGTEF TAAALLMQEWFPQISMWIWTLIFAVTIFGLNISSTRVFAESEFWLALVKVITVIAFIVLG LLAIFGLIPFHGAQTAPLFSNLTAQGWFPHGFLPIFTTMLIVNFAFSGTELIGVAAGETK DPAQNVPKAINAAIWRLLIFFVGTIIVISALLPFQLAGLGGDNVSNSPFVTVFNYIGIPY ADDIIRFVIITALLSAANSGLYAASRMMWSLSEQKLLPGVFATLSKSGTPIVALVVTMFG AIPGLLSEQFAPETIFKNLLGVAAFTMVIVWMSICLSQFNFRRQWYRSGHTVSDLKYAAP LFPIVPILGFLFCFITCLSMAADPEMRAGFIGCLIFTALCYLSYFIFYRNKA >gi|333032581|gb|GL891845.1| GENE 19 18858 - 20366 1591 502 aa, chain - ## HITS:1 COG:PA3134 KEGG:ns NR:ns ## COG: PA3134 COG0008 # Protein_GI_number: 15598330 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Pseudomonas aeruginosa # 3 491 4 492 494 642 63.0 0 MKVRTRIAPSPTGFPHVGTAYIALFNMCFAKQHGGEFILRIEDTDQLRSTPESEKMILDS LRWLGLNWSEGPDVGGPHAPYRQSERMGIYKQYALELVEKGHAFYCFATAEELDQMRAEQ QARGETPKYDGRGLKLSQEEVARRLEAGEPHVIRMKVPEEGVCKFNDLLRGEVEIPWAQV DMQVLLKTDGLPTYHLANVVDDHLMEITHVLRGEEWLPSAPKHQLLYQYFGWEMPTLCHM PLLRNPDKSKLSKRKNPTSINYYRDIGVLPEALLNYLGRMGWSMPDEREVFTLQDMMDNF DIQRVSLGGPIFDVEKLNWLNGQWIKGLTPGQLLDRLLTWKSDRSTLEDIAAAIQPRINL LSEAVNWAGFYFNHMPQITAEMFESKKLTQEQVRQSLQFAIWRLESQFTWNNDTVSQTLM DLANQMGIKLRDFMPTFFIAIAGSTSSTPVMQSMVTLGPDLTFARLRHALEIVGAPSKKE VKNWEKLNESLKLPKNEATSEA >gi|333032581|gb|GL891845.1| GENE 20 20483 - 20782 301 99 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000309 NR:ns ## KEGG: ABBFA_000309 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 99 1 99 99 164 100.0 9e-40 MKIHYGKALSLGLVLSFASQLSTAAVLKDTPSKSLSDKQSSLIEKALDQQKRNTIVLPST DDELKVLNTIRVTPTQNFLAAQHERFSRFVQAIFQPHTS >gi|333032581|gb|GL891845.1| GENE 21 21179 - 22180 1025 333 aa, chain + ## HITS:1 COG:RSc1336 KEGG:ns NR:ns ## COG: RSc1336 COG1613 # Protein_GI_number: 17546055 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Ralstonia solanacearum # 21 329 23 331 336 421 65.0 1e-118 MKRIARIAVATYMGLAVSAVQAATTFLNVSYDPTREFYQEYNQAFGKFWKQRTGQDVDFK QSHGGSGKQARAVATGLEADVVTLALANDIDEIVKAGFIQPNWQKEFPNNSAPYTSTVVF LVRKGNPKNIRDWNDLTKPGVEIITPNPKTGGAPRWIYLSAWGYALKQPGGNDAKAKELV KKLYHNVKVLDSGARGSLTTFAERGIGDVLLSWENEALLATKGLDKDKYEIVYPSISILA EPSVAIVDKTVDKDGNRTLAKGYLNFLYSPLGQELAAKHYFRPRNPQVAAKYAAQFPKIK LFTINDVFGGWAKAQKTHFANGAIFDQIYDGKQ >gi|333032581|gb|GL891845.1| GENE 22 22403 - 23326 1034 307 aa, chain + ## HITS:1 COG:PM0134 KEGG:ns NR:ns ## COG: PM0134 COG0275 # Protein_GI_number: 15601999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Pasteurella multocida # 2 302 11 321 321 293 54.0 3e-79 MSHISVLLFETVESLLADRTTGVYIDATFGRGGHTRLLLSKLDENARVYAFDKDPQALEV AAALAQEDPRFTIIHASFADIKEKMQEIGVQSVDGIMADLGVSSPQLDQAERGFSFMQDG PLDMRMDNSKGLTAAEWLLEVEEEDLANIIYQYGEERYSRRIARAIKQAGKLDTTAQLAE IVKTAHPKWEKHKHPATRTFQAIRIAINKELDDIEVFLPQAVDLLKPKGRLSVISFHSLE DRLIKQFIQKESTLAEDSGWGMPQQQVDTRRLKKISRVRASEEEVKANPRSRSAWLRVAE RLEQKGA >gi|333032581|gb|GL891845.1| GENE 23 23326 - 23658 287 110 aa, chain + ## HITS:1 COG:no KEGG:AOLE_01435 NR:ns ## KEGG: AOLE_01435 # Name: not_defined # Def: cell division protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 110 1 110 110 171 97.0 8e-42 MKSSDEIETTENKVVKKVVVYAVMVALVFISAMMVVFQVFEYRHDYRELSSYMRERDDLN AEWGRLLIEQQTFGATAQIGTRAVTQLRMFSPPAAETVVISLPMTSEQNK >gi|333032581|gb|GL891845.1| GENE 24 23670 - 25502 1973 610 aa, chain + ## HITS:1 COG:PA4418 KEGG:ns NR:ns ## COG: PA4418 COG0768 # Protein_GI_number: 15599614 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Pseudomonas aeruginosa # 27 598 13 558 579 432 40.0 1e-121 MVDKRTKQTRKKQQSISEKPSLAFDMWRFYLLWAVVLLCFVVLIARAFYVQVINKDFLQN KANANILRTERIEAMRGVISDRHGVPLAISSPIMKIVIDPRDYFETKHLYDQITAELKQD PNNRKLKRQLPDKNLNLDELADVVGVDRADLKKQMNARPRSRYLVLKKEVPPQQADLIMK GNFQGVYAEKTYKRYYPQPQPNAQIIGLTNSEGQGIEGLEMQLNKQLSGVDGEQKIIRDK RGNRLKVSEVIREGEPGENITLSIDSRLQYIMYRELTAAGVANNARSATAIAVDVKTGEI LAMTSWPSYNPNDKNGLSNKDAMRNRGAIDMFEPGSTMKPFTISAALETGQYTPNTIVNT SPGSMRLGWHTIRDTHNYGALTVSGVIIKSSNVGSAKIALSLPKETLPSFFNRVGFGKRS AVRFPGESSGLVLPVNKLNSSQIGTMAYGYGLNATILQLAQGYAMLANHGVKMPLSLHKL DQPPKGEQVLNPKIADQVLLMLEQVTMPGGTAKQANIPGYRVGGKTGTAHKLRADGKGYS NNEYRALFAGVAPISDPRLAVIVVVENPQGRYYGGLVAAPVFARIMQESLRLMNVPLDKP LNTPENPIRR >gi|333032581|gb|GL891845.1| GENE 25 25506 - 27005 1567 499 aa, chain + ## HITS:1 COG:NMB0414 KEGG:ns NR:ns ## COG: NMB0414 COG0769 # Protein_GI_number: 15676327 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Neisseria meningitidis MC58 # 28 485 29 488 492 320 39.0 3e-87 MTVSFQEIHPIEIDAQWPQQPFHGFSLDSRKVETGQIFIALTSYSQPEKTRTFAEAALAN GALAVISETELGVANEWVCPDVRQRMGEWQKRYLQQADVVKPLRIIAVTGTNGKTTISRL IAELISSQQQRCAVMGTTGNGILPNLTPSTHTTLDALQLQNALHDYAKQGATFASLEASS HGLEQGRLNGCDIEIAVYSNLSRDHLDYHGTLEAYAEAKARLFQFNSLKVAVINLDDAHA DLMIKSAQNNPAQPKILTYSLTQNTADYYITDLSYSLAGATFNLVSQQGSFAVESPLLGH FNVENLIAALIAAEQAGFDLQALVNFVPKLIGAPGRMQVIRDDERLFVVDYAHTPDALIQ VLKTLKRHVSNQLWAVFGCGGDRDRGKRPLMTQAALDGANPVILTSDNPRTEDPEQIFAD MKQGIDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENYQEINGVRHWFDDVVE VRSAIDAQHHTVDAAYPAQ >gi|333032581|gb|GL891845.1| GENE 26 27014 - 28414 1329 466 aa, chain + ## HITS:1 COG:HI1134 KEGG:ns NR:ns ## COG: HI1134 COG0770 # Protein_GI_number: 16273060 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Haemophilus influenzae # 18 466 8 455 457 301 40.0 2e-81 MHTSTTSTVPLEPWTAQQLQQATQGYWHKDQIPQSEIKRILTDSRHAESGDAFLALKGER FDAHNFVAQVAANGCQVAIVERPIDAEIAQLVVADTRLALGQLGAYRREQNAQLKVIALT GSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGE IDYTSKIVQPHVAGILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAE IREAAKSHQIMSFGAGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNVQNATAA VAFALALGVSLEDIVKGLEQAQGAKGRLNFLQKAPHLFIDDTYNANPTSMRAAAQVLLQQ NGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPLDHIVAVGQFASAALEGAGLHSTKLKA FQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEKL >gi|333032581|gb|GL891845.1| GENE 27 28415 - 29533 1365 372 aa, chain + ## HITS:1 COG:STM0125 KEGG:ns NR:ns ## COG: STM0125 COG0472 # Protein_GI_number: 16763515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Salmonella typhimurium LT2 # 1 372 1 360 360 382 55.0 1e-106 MLLWLFEQLAGYHSSFQVVRYLTLRSLLSVLTSLTIGLVLGPIMIRKLQALKYGQAVSSF APENHAKKMGTPTMGGILILLSIGISTLLWADLSNPYVWIVLGVMVVFGAVGWADDWIKI RYKDNAGLPARKKFFWTSVASLGAGIALYLIATQQSNAEYTANMLDLLIPFFKNLSIPLS IVPLGLAFIVFTYLVINGASNAVNLTDGLDGLAIMPVVMVATGLGVFAYLSGDIRFANYL HIPYVKYTSELVVICSAMIGAGLAFLWYNAHPAQVFMGDVGALALGAMLGTIAVMVRQEI VFAIMGGVFVMEAVSVFLQIGSLRMRNKRVFLMAPLHHHYEKQGWKETQVVIRFWIITIM LVVLGLMTLKLR >gi|333032581|gb|GL891845.1| GENE 28 29594 - 29926 410 110 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0286 NR:ns ## KEGG: ABAYE0286 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 110 1 110 110 195 99.0 5e-49 MTKVAGLDQLSVINQKVVGEGEVLPQVVLKDGSQVQTGTVATMLHNIELYNAGERGQIEE ELKIAIPTLIKVGLFDLFEVDEWIKGTNAGRTFVGMHAKAYLQQKEQENN >gi|333032581|gb|GL891845.1| GENE 29 29929 - 30753 876 274 aa, chain + ## HITS:1 COG:rrmA KEGG:ns NR:ns ## COG: rrmA COG0500 # Protein_GI_number: 16129776 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli K12 # 8 268 5 267 269 194 39.0 2e-49 MTTQNLMCPVCRQRLELVSKTWRCEQGHSYDIAKQGYVNLHVVQHKHSKNPGDTPESVDA RRAFLQGGYYQPLQQAVVHLLKDLKAKMVLDIGCGEGYYTSAMQQVVEQCIGVDIAKNAV QRAAKLNDKVTWVVGTGATLPVIDQSMDVCTSLFSPIPQTEILRVLKDDGYLIVVTPATD HLYAMREALFEQVNPHTPQKFVEQLQDLFELKEQQVIDAPLVLDQQALKNLIAMTPYAYK ASPERRMQLEQKAHLQVTASFQIYLFQKRNKKAI >gi|333032581|gb|GL891845.1| GENE 30 30771 - 33251 2570 826 aa, chain - ## HITS:1 COG:PA5045 KEGG:ns NR:ns ## COG: PA5045 COG5009 # Protein_GI_number: 15600238 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Pseudomonas aeruginosa # 1 728 20 754 822 675 46.0 0 MGFYGMYLYIAPTLPEMSSLKKAPLLKPLQVYTADNQLIAEYGGKLSIPVEYKQIPPNFI HAFLAAEDSSFFEHSGISFKGLGRALSESVTGSDVQTGGSTITMQVAKNYYLSPERTLKR KLTEIFLARKIEQNLSKEDILSLYVNKIFLGKNAYGIAAAAKIYYNKSINELSIAQMAMI AGLPKAPSKYNPVVNPERALERRNWILGRMLQLGYISQAEYQKAVAEPINLNMPNRDLNN IHPYAGEMVRSELVKHFGEQAIDSGYKVYTTINAKRQAIAEKAVQDGLEAYDRRHGWRGA EAHDKPLSEFRAYANTYPAQVTKVNSSSFEALMQDGSTVTVQWSGMSWARPYRNANSVGA APSRASQIVKVKDIVRLRPNEAKTAWSLVQVPKVQGQLIAINPNDGSIEAIVGGYNFYQS KFNRALQGWRQPGSTIKPFLYALALERGMTPYSMVNDSPITIGKWTPKNSDGRYLGMIPL RRALYLSRNTVSVRLLQTVGIERTRQLFMDFGLQEDQIPRNYTIALGTPQVLPIQMATGY ATFANGGYRVQPHFIQRIEDAYGKVIYEAKPEYACIPCINAPETTDDAQVTTPDDQVVEV TNKELEQKEKTTKQLNLKQTDKNNSQYRQAQRILKSSSAYDMANILRDVIEHGTGRAALK IGRSDLGGKTGTTNDAKDAWFAGFNGKLVTVTWVGFDQPTTLGRREYGGIAALPIWINFM GQALQGTPAAWVRLEKDAQAPISRDKQEVTTEVGDKKTYRAAPPLARPLYRPAPPQPKTT NNDFDDLPGEEIVIPSKTTPPAMKPSQGAAPKREKDELENLINQIE >gi|333032581|gb|GL891845.1| GENE 31 33489 - 34547 990 352 aa, chain + ## HITS:1 COG:PA5044 KEGG:ns NR:ns ## COG: PA5044 COG4972 # Protein_GI_number: 15600237 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Pseudomonas aeruginosa # 1 352 1 354 354 353 55.0 2e-97 MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAV AEALERAMNLANPQTTHAAIAVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLD EVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLELADLNPKLADVESYAVERAFS VFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPG LAKLLQQKLGYRVTIANPFLQMGFSPQVDVQKIENDASSLMVACGLALRSFD >gi|333032581|gb|GL891845.1| GENE 32 34547 - 35188 595 213 aa, chain + ## HITS:1 COG:PA5043 KEGG:ns NR:ns ## COG: PA5043 COG3166 # Protein_GI_number: 15600236 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilN # Organism: Pseudomonas aeruginosa # 1 160 1 160 198 131 43.0 7e-31 MATINLLPWREELREQRKKQFITLCFGVVVLGITTVFGGWFYFDHKLDDQEQANQLIMST NQNLDQQLKTLNGLQEQRDAIIERMKLIQGLQSQRPVVVRLVDELVRVTPSAMYLTKFSR TGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMNSFLANEEKKDKAASSLLPRVEDHY GSFVVTVDLGEMGVTTTDDSAKPSTGESVGAAK >gi|333032581|gb|GL891845.1| GENE 33 35185 - 35925 362 246 aa, chain + ## HITS:1 COG:PA5042 KEGG:ns NR:ns ## COG: PA5042 COG3167 # Protein_GI_number: 15600235 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilO # Organism: Pseudomonas aeruginosa # 31 219 16 200 207 156 44.0 3e-38 MSQDELQELSLEQLSAKKKKFNLDKFLQQFNTLDMNNYGSWPISVKITCWIFIFFAVLAL GYFIVIQPKLQAIDNAQAQESNLLNEFREKDSKLRNLQQYQVQLQEMQANFNQQLEQLPK ETEIPSLVEDINLTGVNSGLKFKNIRLEDEVKQEIFIEQPIAIEATGDYHAFGAFVSSIA ALPRIVTMHDFTVDVSPAKDNKSDIPVLNYSIKAKTYRYVGATDTSEQTGKAPAASASTN TTVQPK >gi|333032581|gb|GL891845.1| GENE 34 35936 - 36463 398 175 aa, chain + ## HITS:1 COG:PA5041 KEGG:ns NR:ns ## COG: PA5041 COG3168 # Protein_GI_number: 15600234 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilP # Organism: Pseudomonas aeruginosa # 30 170 31 170 174 100 38.0 1e-21 MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQL KSPFMPSSLAAELKIMAGKRVYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTP DQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREGYVERPRTLVLIGPAP >gi|333032581|gb|GL891845.1| GENE 35 36531 - 38696 2229 721 aa, chain + ## HITS:1 COG:PA5040 KEGG:ns NR:ns ## COG: PA5040 COG4796 # Protein_GI_number: 15600233 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component HofQ # Organism: Pseudomonas aeruginosa # 35 715 34 707 714 459 40.0 1e-129 MNHVFRQFSMGAVAIAIMQAASAQVSMTNIVPMQIAGQGTEIRVMFNGLPPQPQAYQLEN PSRLILDFDKAQQGLKQSKISVATNEASSVDVTSDDQRSRLTVNLKDAGAFTTRVEGNTF ILKINSAQTSNKPLPVVSAQPQGVSNIGFQRGSQGEGLVVVDLLGSNTPVDVQQQGSKVV IRTIGTKIPTHLARRLNVNDFATPVSSIDAYNDKGVGVITIQSSGSYEYMAYQAENKLTI SLKRPQDKNVTSLYKTPNYSGNKLSLDFQDIEVRRVLQLLADFTGINMVAADSVQGNITL RLKDVPWDQALDIILKTKNLDKRRNGNVIWIAPVAELIKAEEEEAKAVAQSVKLAPLQTE YIQLKYAKAGDIMGLITQGSNNSNGLQHTSGGGTSTSTNLNTGVDSLGNNVGSLLSPRGT ITQDDRTNTLIINDTAQSIDQIRKMIDLLDVQVKQVMVEARIVRASTSFTKELGVKWGIL SQGITNNNNLLVGGSETTLWNLREPKKDETTGGYKYTIERPDNLNVDLGVSNPAGSIAFG LISMSDFMLDLELSALQADGYGEVISTPKVMTADKQTAKVATGQQVPYQSTTNSAAGSTA TTSFKDALLSLNVTPSITPDGKIQMKLDISKDSVAGAAPNGELILNKNNINTNVLVDNGE TVILGGVFEQTTMNSQTKVPFFGDIPVVGRLFRKDVKSDDKQELLIFVTPRIVNDTLARN H >gi|333032581|gb|GL891845.1| GENE 36 38708 - 39277 751 189 aa, chain + ## HITS:1 COG:PM1224 KEGG:ns NR:ns ## COG: PM1224 COG0703 # Protein_GI_number: 15603089 # Func_class: E Amino acid transport and metabolism # Function: Shikimate kinase # Organism: Pasteurella multocida # 20 183 6 170 175 187 58.0 1e-47 MKAIEIGGALPSKAFETLPNIYLVGPMGAGKTTVGRHLAELLGREFLDSDHEIERKTGAT IPWIFEKEGEVGFRTRETVVLNELTSRKALVLATGGGAITQAPNREFLKQRGIVVYLYTP VELQLQRTYRDKNRPLLQVENPEQKLRDLLKIRDPLYREVAHYTIETNQGAARDLAQKIL QLILSNKLK >gi|333032581|gb|GL891845.1| GENE 37 39306 - 40388 1123 360 aa, chain + ## HITS:1 COG:PA5038 KEGG:ns NR:ns ## COG: PA5038 COG0337 # Protein_GI_number: 15600231 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Pseudomonas aeruginosa # 1 360 1 366 368 419 58.0 1e-117 MQTLHVELGERRYPIFIGSQLDPKQLLEPYIHGQQVMIVSNVTVAPLYLSHYQEALESLG KTVATCILPDGEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGGVIGDMAGFASACFQRG VYFVQVPTTLLSQVDSSVGGKTGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAG LAEVIKYALLGDEDFLVWLEENMDGLVARDADLLAEAVYRSCAHKARIVANDEKEQGERA LLNLGHTFGHAIESYLGYGTWLHGEAVATGMVMAADLSQRLGWISNEDVARTKKIIQRAN LPISCPQIPLDDFLGYMAHDKKVLNGQLRLVLLKQLGQAVITKDFDVELMKQAILANQHG >gi|333032581|gb|GL891845.1| GENE 38 40404 - 41279 762 291 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03387 NR:ns ## KEGG: ACICU_03387 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 291 1 291 291 537 98.0 1e-151 MTVSRTLWQNVQQYIWLVGGIVCLFLAFIFWVITDNKKLVEVEKSADSDAPVQIQPEKVA TTPNLGALADEVRPLDLTTRTVASGEHEPEFRGTKFINENKKQWTLELFRASDEDIIKNF LKSRTDRNKFIYFRLSGEQQAEQYVLAYGTFKRSEDAVQQLTQINLQLPDSVKPQPQQFS SYAPLVNDLGADEMKGGNNQLYEVRLRPAALPRIDESLLMSAPASGTLNTQPKPPSTNSA TKTTIVRRDAAGNVVDVQQSNSNIDQPNKPAQTRINENQPKNATNEGTRGN >gi|333032581|gb|GL891845.1| GENE 39 41734 - 46215 4944 1493 aa, chain + ## HITS:1 COG:PA5036_2 KEGG:ns NR:ns ## COG: PA5036_2 COG0069 # Protein_GI_number: 15600229 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Pseudomonas aeruginosa # 394 1182 2 789 789 1176 71.0 0 MHMPSPNTVAPAQGLYQPDEFKDNCGFGLIAHMKGESSHHLVETAIHSLSCMTHRGGIAA DGKTGDGCGLLLAMPKQFFRDEAKKLSDITLSEIFAVGTVFLNIDPALAQHSKNILTKEI ESEGLRVLAWRIVPTNNDALGEIALQSLPAFEQVIVNCPMGVTEVEFNRKLFLARRRAEQ QLQNDPLFYVTTLCSTVISYKGLMMPAAIAEFYTDLADERLKSHIVVFHQRFSTNTLPRW PLAQPFRYLAHNGEINTITANRNWALARTPKFENPLLPGLTELNPIVNRTGSDSSSLDNM LEILVGGGMDLFRALRMLVPPAWQNVETLDADLRAFYEFNSKHMEAWDGPAGLVIQDGRH AICMLDRNGLRPARWVITKNDYITLASEIGVWGYEPEDVVSKGRVGPGQILVVDTLTGKV LDTKDVSNHLKNMRPYREWLRDHAIRLNANPELEEQLVDKGLTGDALKAAQKMFMVTFEE RDQLLRPIAESGQEAVGSMGDDTPMAVLSRQVRHVTDYFRQQFAQVTNPPIDPLRESIVM SLETCLGREQNVFEQGPEHADRIIISSPVLSNSKMQQIRSIERAGYEAVDIDLNYAETEG LQAAITRICEESAQAVRDGKTLIVLTDKNIRQGYLPANAALATGAVHHHLIKTGLRTDAN IMVETGFARDPHQFAVLLGFGATAIYPYLAYDVINDLIAKGELLGDPIHAQANFRKGIEK GLLKVLSKMGISTVASYRGGQLFEAVGLSSEVVDQCFLGVPSRIQGATFVDLENDQKKLA ATAWSNRKPIDQGGLLKFVFGKEYHAFNPDVINSLHKAVRSGKYEDFKEYAELVNNRPIA TIRDLFKLKTTNPIPVEQVESVEAILPRFDSAGMSLGALSPEAHEAIAIAMNTIGGRSNS GEGGEDPARYGTIRNSKIKQIASGRFGVTPAYLTSAEVLQIKVAQGAKPGEGGQLPGGKV NGLIARLRYSVPGVTLISPPPHHDIYSIEDLSQLIFDLKQVNPKAMVSVKLVSEPGVGTI AAGVAKAYADFITISGYDGGTAASPLSSIHHAGSPWELGLSEAHQALRVNDLRGKVRVQT DGGLKTGLDVIKAAILGAESFGFGSTPMIALGCKYLRICHLNNCATGVATQQDHLRQEHY IGEPQMLINFFHFIAEETREWLAALGVASLKDLIGRVDLLEVLPGETEKHAHLDLSALLT SHPAAEGKAQYCEVEGNAPFDKGVLAERMVEEMLPAIESSAGGQFNFNVVNCDRSIGARV SGEIARRYGNLGMEAHPVVMNLTGTAGQSLGVWNAGGLHIRLEGDANDYVGKGMAGGRIS IFPPKGSPFQTQNTAIIGNTCLYGATGGKLFAAGTAGERFAVRNSGAFAVIEGAGDHCCE YMTGGVVTVLGKVGHNFGAGMTGGFAYVLDLDNDFVDYYNHELIDLTRISTESMEDHKEF LLRIIDEHIKETGSAWAYKIRNEFDFYSRKFWLVKPKAANLQTLLKTTQADPQ >gi|333032581|gb|GL891845.1| GENE 40 46285 - 47706 1556 473 aa, chain + ## HITS:1 COG:PA5035 KEGG:ns NR:ns ## COG: PA5035 COG0493 # Protein_GI_number: 15600228 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pseudomonas aeruginosa # 2 473 7 477 477 782 77.0 0 MAERLNNDFQFLDVPRQDPEKKDITVRKAEFVEIYKPFTSETVTNQTHRCLGCGNPYCEW KCPVHNYIPNWLKLIAEGQIFQAAELCHQTNTLPEVCGRVCPQDRLCEGACTLNDGFGAV TIGNAEKYINDTAFALGWRPDMSHVKWTGKKVAIIGAGPAGLGCADILARGGVKPVVFDK RPEIGGLLTFGIPEFKMEKDVMKRRREIFTGMGIEFRLNTEIGKDVTIDELLAEYDAVFM GMGTYTYMKGGFPGEDLDGVYDALDFLISNVNRCQGWEKDPSEYISMDGKKVIVLGGGDT AMDCNRTSLRQGAHDVTCAYRRDESNMPGSAREVKNAYEEGVKFLFNRQPIEIVGENGKV TGVKVVTTQMGEPDSRGRRSPEPIPGSEEVLPADAVLLAFGFRPSPADWFGSVNINLDGS GRVVAPEQQEFKFQTSNPKIFAGGDMVRGSDLVVTAIWEGRQAAEGILDYLGV >gi|333032581|gb|GL891845.1| GENE 41 47882 - 48769 714 295 aa, chain + ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 23 278 16 275 278 182 40.0 8e-46 MNIAGMTAEKSYLNRRKALGIIVRRLEFNPQAIKRYYFANSPLMSHFLTALSSTFPVGEQ FFVNSVRNVRDKVSDPQLQAQIAAFIGQEAMHSKAHGEFNEAWRRDDYNLDRFQNWLNER DKYLRTISPKLQLALTCAFEHFTALLGGYILQHPELLKTLDQDALKLWVWHAIEEIEHRS VAFDVYQQVYGDDRIRRLLMRSVTTGFASLAFYGTTRLFWQDKWKSLPKIGGNLFGLYLL AKMLIQLTPEYFAYYKKDFHPSQKDYGHMVDYWKSYLADEYQMASFQEEKNPRPS >gi|333032581|gb|GL891845.1| GENE 42 48900 - 49490 838 196 aa, chain + ## HITS:1 COG:PA0537 KEGG:ns NR:ns ## COG: PA0537 COG1704 # Protein_GI_number: 15595734 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 20 195 18 195 202 199 60.0 2e-51 MKTFKQLAIATTLASTLLFSGCGYNTLQVKDEAVTAAWSEVQNQYQRRADLVPNLVNVVK GYAKHEEQVLTEVTQARANVAGLKVDKEVLEDPALLEKYQQAQSQLTGALSRLIAVSENY PDLKANTQFQELQVQLEGTENRIAVARNRYITTVQDYNAYVRQFPQAVTAKVIGMHPKAN FSAEASAQQAPKVSFD >gi|333032581|gb|GL891845.1| GENE 43 49512 - 50594 1090 360 aa, chain + ## HITS:1 COG:PM0783 KEGG:ns NR:ns ## COG: PM0783 COG1512 # Protein_GI_number: 15602648 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Pasteurella multocida # 94 219 29 154 254 122 46.0 8e-28 MRNTILLQPKQIRVFVITLIVLCCGVLFQNAAWSENNIATATDETDTVVAGKIIQQQQAQ ASKPQINSQAASSVTPQTQVANDMADGESIRGLPTLNQPVIDQANVLSETEKQQLSQKIL NLYQQGKAQIGIVIVPTTGQEDIFDYALRVGEKWQLGSSKRDNGLLIAVAINDHRIQILT GYGLEGVLPDIVASRIIRNQITPYFKQAQYAQGLNAGLDEIGRILNLDPEVAQQAAQDLK ERQHQAAEEQQAKQTTLTMALFILVAGVVGSFIVGRPLSASTAGVAAAVAGFVNGAGVVM SLLLGFGIFFLLITSIAQLILQAILSGAGGGGRGGGFGGGGGGYGGGGGRFGGGGASGSW >gi|333032581|gb|GL891845.1| GENE 44 50588 - 51148 478 186 aa, chain + ## HITS:1 COG:RSc0662 KEGG:ns NR:ns ## COG: RSc0662 COG3762 # Protein_GI_number: 17545381 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 25 185 11 173 173 99 33.0 4e-21 MVTTSETTQIITQPKIEEYVEPSLKRWFKHFCYLPASSKYFSKQDKQAIAEAVQQAEHGH VGEIQVVIEGHIPCSQAYRQNTRLRAQQLFAELGVWDTELNSGVLLYLNLCERTVEIIFD RGIRNATTEQIWQQICKSIVEQLQQKQYQKAVVTGVQQIGEVMSRFYDENMPDQLNELGN APIIIN >gi|333032581|gb|GL891845.1| GENE 45 51490 - 51924 628 144 aa, chain + ## HITS:1 COG:XF0487 KEGG:ns NR:ns ## COG: XF0487 COG4969 # Protein_GI_number: 15837089 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, major pilin PilA # Organism: Xylella fastidiosa 9a5c # 1 141 8 174 185 96 38.0 2e-20 MNAQKGFTLIELMIVVAIIGILAAIAIPAYQNYIAKSQVSTGLADITAGKTNAETKLAEG LTAALTDVTTLGLQQSTNACAITANIGTNGASNITCTLKGTSQINGKKIEWIRDADNATN GTTGAWRCKTDVAENLRPKSCGAS >gi|333032581|gb|GL891845.1| GENE 46 51982 - 53292 598 436 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03379 NR:ns ## KEGG: ACICU_03379 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 436 1 436 436 704 99.0 0 MLKKNILLFVIVIYLITALLGYRIGWSVFQYDELRLLQFPLALCALLILISAKKLKYSIY SQINFFIIGVFILIQHINWGIFEFQELWSAIALLFIFSALTYELRNIKNIEHGIALIVVT AIIPCLFILISIFNFIIHQQWFDWQFNSGTIRIYDSVIVPLFFFLIYLKNKKYPYISYFY PIVIFFFALAWFFDGARSALLAVMTGLLVLFIYSKENRKLILQSCIYIFLAFFIYKITIF LAEKNTMTVIRTGTSLRAEMWKFVFKQWKQHPFTGVGGGYLSKIQYAYGHHIHNLYLRLI FEWGIIGLIFCIWMLTQLIGLFKDKTVSLILKVGVIAVLVDAMFSGSMVYPASQIACVLF IAFTFSHRELTSSSQYSSRSTKILIALWGVLFLYITIMYLGQDLTCWSCGSYGGRMAPNF WFYGGAEHLVPASKIP >gi|333032581|gb|GL891845.1| GENE 47 53400 - 55028 1129 542 aa, chain + ## HITS:1 COG:RSc0559 KEGG:ns NR:ns ## COG: RSc0559 COG3307 # Protein_GI_number: 17545278 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A core - O-antigen ligase and related enzymes # Organism: Ralstonia solanacearum # 17 529 13 530 569 75 24.0 3e-13 MQVFFLFLAAILLGFAWLSPFHYNPWVMFSSEMSTFAAGLSVLAALFYQNIKIPRAQLLL LPFILIPVVQWAFGLVFDFSTALLSSLYLLGFWFMVVAGYNLSLDQQKRDQIFTGFSLLL IIVSIATSFIAICQWLNIESHFVHMLHLIGNRPYGNFGQPNNMATFLIMGLLGCLFLYEK NKATVWLLFPSALIILFTIALSQSRTSWVVFPFLLIYWIVKLFGKQKRFGFIQGFLWCAG FFVIAGVILPFATSLIEAWSSADVAQASSLVERASSGYLRFNIWTQMLLAVQQHPWLGYG WNQTSVAQMSAYALFPTTEWTTSAHNILLDLIIWNGIPIGIAIIAYFACWFLWLNQQAKE TISIIAIMMVCTVLIHAMLEFPQRYAYFLLTCGFLLGIIQAQTPVLKGIVLNKQVLRLIW GVSLILLLAIWRDYNVYVTNSNLLFKNKQPNAEVLGSNQIFVLTQFEQRLKWIEMKPETT LSDADLAVWGNFVKNKATPYNLRKYAQLLAYNGKVEQAEQQIFILQHLYRQQITLAELLK DK >gi|333032581|gb|GL891845.1| GENE 48 55070 - 55534 664 154 aa, chain - ## HITS:1 COG:PA3531 KEGG:ns NR:ns ## COG: PA3531 COG2193 # Protein_GI_number: 15598727 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin (cytochrome b1) # Organism: Pseudomonas aeruginosa # 1 154 1 154 158 168 59.0 4e-42 MKGNRDVINQLNQVLYHHLTAINQYFLHSRMFNDWGIEQLGSAEYKESIRQMKHADKIIE RILFLEGLPNLQHLGKLYIGQHTEEVLQCDIRKVKENIEAIQKAVALAETEQDYVTRDLV QEILEKEEEYWDWLDTQIDLIGSVGIENYIQSQM >gi|333032581|gb|GL891845.1| GENE 49 55779 - 55973 341 64 aa, chain - ## HITS:1 COG:PA3530 KEGG:ns NR:ns ## COG: PA3530 COG2906 # Protein_GI_number: 15598726 # Func_class: P Inorganic ion transport and metabolism # Function: Bacterioferritin-associated ferredoxin # Organism: Pseudomonas aeruginosa # 1 64 1 64 73 57 46.0 6e-09 MYVCLCRGITDQDIKDAIENGAESYREIRDLLDLGTCCGRCAPEARAIISEELAEIAARI SVAA >gi|333032581|gb|GL891845.1| GENE 50 56183 - 56566 573 127 aa, chain - ## HITS:1 COG:PA5339 KEGG:ns NR:ns ## COG: PA5339 COG0251 # Protein_GI_number: 15600532 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 125 1 125 126 179 72.0 2e-45 MSRQVIHTENAPAAIGTYSQAILVGNTLYLSGQIGLDPYSMELVDGIEAQIRRVFDNLKA VCEAAGGTLADIAKLNIFLTDLSNFQLVNQIMGEYFAQPYPARAALGVASLPKGALVEMD GIVIINQ >gi|333032581|gb|GL891845.1| GENE 51 56687 - 58792 1847 701 aa, chain - ## HITS:1 COG:YPO0038 KEGG:ns NR:ns ## COG: YPO0038 COG0317 # Protein_GI_number: 16120391 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Yersinia pestis # 11 687 5 699 702 356 34.0 8e-98 MPGEEVSQAKQQLKLIIDPYLSVSEVEKVLAACDFGDLAHTGITRKSGEPYILHPIAVSC ILANMRLDPETLMAALLHDVIEDTQYTKDDIIERFGQTVAELVDGVTKLSQSSDKEYNKA ASFRKILQATLQDPRVIIIKLADRYHNMTTLGALRPDKRARIAQETFDIFVPMARLVGMN EMADNLENLCYQNLDLDMFDNVQNALLQTKPERCKYQSIWEQNLAELLHNYHIQGRIKKK NNNIELLRHFVKNEMDLQELTHSHAFEIVLQSIADCDRLVAALKENFQVIQYQDHIRRPL PGGNQSLMIKLKGEKTTLSLTIQTELMRKAARFGVVLGENAPQTCRSAIQASMQNLNTLI DGECAKTTFNDLLDYLHQEKIWVYTPHGQLHELPQGATVVDFAYSASLFLGNHAVGAKVD GEIKPLSTPLVSGQVIEIITDVLATPNPDWLSFINTQKARRALQHVLKDQDIEEQRLVGA QALSRALKLFNRSINDLSDADWLDLLQWRHIDNKDALFEQIAVGDLLPQLVANHLFANDK HPRAENSDRLIQGTEGIDVKYAHCCNPILGDPIQGHLTRRGLIVHRIRCHNLLHEQHLHP ENIMPLQWKADDVDDVRFTAYLAIYMAMNDEQVSDLIYQCRKNNAGVEMVHSNEQRTFVN IVVNNRKHIAKVIRDLRMHYGFPRIERLDAPAPQMEISKVS >gi|333032581|gb|GL891845.1| GENE 52 59000 - 59278 379 92 aa, chain - ## HITS:1 COG:PA5337 KEGG:ns NR:ns ## COG: PA5337 COG1758 # Protein_GI_number: 15600530 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Pseudomonas aeruginosa # 1 68 1 68 88 92 70.0 1e-19 MARVTVEDCLDHVDNRFELVLVASKRARQLARQGMEPTVEWDNDKPTVVALREIAVGHVT KEILKQREQDYQTSSLDLALSTNSLNLEGFSF >gi|333032581|gb|GL891845.1| GENE 53 59351 - 59980 710 209 aa, chain - ## HITS:1 COG:PA5336 KEGG:ns NR:ns ## COG: PA5336 COG0194 # Protein_GI_number: 15600529 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Pseudomonas aeruginosa # 1 202 1 202 203 241 59.0 8e-64 MSGLLFVVSAASGTGKTSLVKALLDRVSNLHVSVSHTTRGQRPGELDGVHYHFTTKDEFL DQVNQGGFIEYAEVFGNYYGTSQATVKQQLAQGHDVLLEIDWQGAEQVRKLFPESKQIFI LPPTQFDLRQRLSNRGTDSVEVIEHRLSCAVEDMQHYVNFDYIIINDDFNKALHELEAVI TANRLVLSQQAKRHQNLIQDLITPQPKQE >gi|333032581|gb|GL891845.1| GENE 54 60103 - 61053 465 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227371337|ref|ZP_03854821.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Veillonella parvula DSM 2008] # 1 299 1 287 632 183 36 3e-45 MEIVLANPRGFCAGVDRAIAIVNRALECFNPPIYVRHEVVHNKFVVDDLRQRGAVFVDEL DQVPDDSIVIFSAHGVSKAVQQEAERRGLKVFDATCPLVTKVHIEVTKYAREGTEAILIG HEGHPEVEGTMGQYDKLKGGDIYLVEDEADVAALEVRHPEKLAFVTQTTLSIDDTAKVID ALRAKFPNIQGPRKDDICYATQNRQDAVRDLAEKCDVVLVVGSPNSSNSNRLRELAERMG KAAYLVDNADQLEQSWFNDTCKIGVTAGASAPEILIKQVIQRLQDWGAQAPKELEGREEN ITFSLPKELRIHVTQA >gi|333032581|gb|GL891845.1| GENE 55 61223 - 61696 322 157 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000342 NR:ns ## KEGG: ABBFA_000342 # Name: not_defined # Def: prepilin-type N-terminal cleavage/methylation domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 157 1 157 157 230 97.0 1e-59 MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQA ILGRQNVSVNLNSTASNTPTSLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVA NITQDTLLSICNSRINKKKVIILSKLGTLVFKAEENC >gi|333032581|gb|GL891845.1| GENE 56 61696 - 62250 397 184 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0315 NR:ns ## KEGG: ABAYE0315 # Name: not_defined # Def: type IV fimbrial biogenesis protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 184 3 186 186 327 99.0 2e-88 MHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAE NIRTNSTQASQYPTFVRSYSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMR ITMSNCPGVTNTMVQQRQCLFVFWGRTAPVITTNGTNTSVDVSSCMSNNGVYVNNSTCLM MEAY >gi|333032581|gb|GL891845.1| GENE 57 62251 - 63252 965 333 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000343 NR:ns ## KEGG: ABBFA_000343 # Name: not_defined # Def: prepilin-type N-terminal cleavage/methylation domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 333 1 333 333 611 99.0 1e-173 MAQSFISNKEQGFTLIELIVALALGLILVAAATQLFIGGLLSSRLQKANAEIQDSGIFGL EYMARDIRLLNYGNVVNPQLTDTTPWGGIVLTGSTATNANNINFIPKVDTNTYIPEALLS RGAGDTVSTVNNYWKGLSNIQNSSNAEVQSDQLTIQFIAPTNMTNCEGVNVLAGDLIVQR YFLRVDNNGSSQQDYALACDANTPAVSATAQPDIVNGLGDAGQIILPRIDHFHVLLGAKN AAGNFAYYTIPQYRVAAQAARDASPAVAAPRILSIQISVLARSTNNAQNKAIDPNQSFLM LDQNVHAADNRTRFLRRVYSVTIALRNAMGETI >gi|333032581|gb|GL891845.1| GENE 58 63249 - 64067 576 272 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000344 NR:ns ## KEGG: ABBFA_000344 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 272 1 272 272 448 100.0 1e-124 MTHLNYKNIKGRSKETGATLIVVLIILLIVISVGVLAIRVAIVSLKVATNSQVGQLNFQS SDTPLELIVQMNPTTLTNITNVIGAALKAHESNPGAEYNFCYKPTSTSVSFAQTRGASLL RAGSANNAVVEDGGVAGFCDLTSDYGSNRQAVVTQVAVSIPTDAMADIPGSNLPRDINLS EGTQLPKSMLSTQRIRVITTAFLPAYASTSLETLQSDCLSTSSAKISDNFDSALTDKQTL ADCLANHNVPFSTQVQEFNYTNKLTEITAPGS >gi|333032581|gb|GL891845.1| GENE 59 64160 - 67933 3435 1257 aa, chain + ## HITS:1 COG:RSc2675 KEGG:ns NR:ns ## COG: RSc2675 COG3419 # Protein_GI_number: 17547394 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, tip-associated adhesin PilY1 # Organism: Ralstonia solanacearum # 778 1007 674 879 1070 72 28.0 6e-12 MTSSVVQASDLQIYASPTAGKKTIVMMLDTSGSMTNNSYGENRLAMLKNGMNAFLASNNP VLNDTRVGLGNFSANGDSRSGQILVAAAPLGDASTLNTVGSQRYKLKQAVANLTAGGSTP SAHAYAEAAAYLMGTTTYSETNYAIRKDSYIKRVRRSDNRTEYSYCTNYRDSQIDTANLW QPCRSNSYWSSWSTNNPGVDNATAYDTSSDWTYYYTYYYTTFNYAVANADSGIPKSKSND TASNPNIVVDRNATNSNAVYQSPLPAVANRQSCDGQGIYFLSDGEPNNTTNTRSASVMST ALGSTFGADFNCSGGLSNTTADSGWACMGEFAKRLFDKTKNPAGVSIQTAFVGFGSDFSS LSSSDVKNACRLSSRTQSDRKGDDACSPNQSTNAVAAPGYGNGGFFPTQSSQGVTDSVIA FINNLDKVPLEPLTTGAISVPYDALNPKNLQEYGYLRAFEPNPANTYLTWRGNLKKYHVV LSGANAGTFEANTGGLVYNATGAFRTGTKDYWNSSTYNDGGKVFFGGSYAKVPLPIAGQP ETRDEEGNITKYYYAVQTKIRNLFTDVSAVASDGSLTKISTSGTNLLKIPAAPPEGTNPF DTVANTASYVLGKFDPSTGQNILKAFPISLKLKILNYLGYSTDINATTLPSSLVTSNEPY LSMGGSIHSLPVQLTYNGTLDDNGNLTSAREQSILYGTMEGGLHIVDASSGIEQMVFVPA DILNDSVASKALVVGQSDASAPAHGMDGAWVSDPAYNITTVGSGSSAVSKVTAKQMNIYG GMRMGGSSYYGLDVLSPTSPKLLFRIGADQTDYSRMGQSWSKPVLANIRYNGSIRRVLIV GGGYDQCYEKPNITLTDACFTNGKAKGNAVYIIDAKTGQRLWWTSDTGSNTDNANMKHSI VSRISTLDRDADGLVDHLYFGDLGGQIFRVDLNNNQTKTNSTYSSFGVRVVRLANLATND STYDGTNDYTGGNAPRFYEPPTVTIHDYGIHTFITLGIASGDRSTPLDVYPLTGREGMTP ASALSGRPVNNVYGIIDRDFVKKNLMSLTDNQLETKDITRTGLRKNPQILRTGETRVAQI FFPTTGVGKGGWYRSLSSTSDGTEKANNSFRIKGGLKAFEEPMAITGNLIIPVYDPQGTG IVAADPCLPRVVGETDRQTYCLPFGACLNPDGTINSNKENPSGFQTKTGSNCPAGVSECN TNVIGAGIRNITFVPKRDEPPVTNSCGKLQLSGNENGTGEWQCTSHLLPVRWYERYR >gi|333032581|gb|GL891845.1| GENE 60 67946 - 68428 333 160 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03365 NR:ns ## KEGG: ACICU_03365 # Name: not_defined # Def: pilin like competence factor # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 160 1 160 160 264 100.0 1e-69 MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLE QHKSRNFTYRGFTTTSITLPRGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNF NFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ >gi|333032581|gb|GL891845.1| GENE 61 68425 - 68850 398 141 aa, chain + ## HITS:1 COG:XF0479 KEGG:ns NR:ns ## COG: XF0479 COG4968 # Protein_GI_number: 15837081 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein PilE # Organism: Xylella fastidiosa 9a5c # 7 127 1 119 125 65 35.0 3e-11 MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNR YPSNATIQSIYGSNVSPIQGQALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQG QKFWAKGATVCALSASSSWTE >gi|333032581|gb|GL891845.1| GENE 62 68952 - 69248 492 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|193078541|gb|ABO13561.2| 30S ribosomal protein S16 [Acinetobacter baumannii ATCC 17978] # 1 98 1 98 98 194 100 2e-48 MVGAGIIRKNYKAFIMVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNPTAQG QAEKLRLDADRFAHWVSQGAQPSERVASLAAQAKKATA >gi|333032581|gb|GL891845.1| GENE 63 69268 - 69816 175 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796730|ref|ZP_02190688.1| 50S ribosomal protein L19 [alpha proteobacterium BAL199] # 10 177 3 160 179 72 28 1e-11 MTPTQNVPEDRIQIGQLRSAYGLNGWLWVYSNTEPMSNMFDYLPWYIETKAGWQIVDVKR WKPHGKGLVVALKGVSDRTGAESLVGANIWIAKSQLPKADVDEYYWSDLKGLTVLGLDDD EQEVNLGQIHELFETGANDVMVVRATPDSIDSEERMIPWHKDVVQRVDLEAGRIYVNWGV DY >gi|333032581|gb|GL891845.1| GENE 64 69862 - 70602 754 246 aa, chain + ## HITS:1 COG:HI0202 KEGG:ns NR:ns ## COG: HI0202 COG0336 # Protein_GI_number: 16272165 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Haemophilus influenzae # 1 246 1 242 246 281 53.0 1e-75 MFFAVITLFPEMFEAITAYGISGRAAKRDIVQVTCINPRDFAEGNYRRVDERPFGGGPGM VMMAEPLAKAINHAKQLASQAGCVHVPVVYMSPQGKTLNEQAVQQFVDYDGLIVLCGRYE GVDERLIQHYVDQEWSIGDYVLSGGELPAMVLLDSIIRRLPNVMSDEQSAIQDSFVDGLL DCPQYTKPDQFEGLDVPEILKSGHHANIEKWRFLQRYQRTLERRPELIEQVTLTKQQKKW LSDEQG >gi|333032581|gb|GL891845.1| GENE 65 70739 - 71179 723 146 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|158517003|gb|ABW70206.1| 50S ribosomal protein [Acinetobacter baumannii] # 1 146 1 146 146 283 99 3e-75 MRFSLYPQRKLRPLLTPHILEIPTMSGKHPLVQAIENSQLKTDLPEFAPGDTVVVQVKVK EGDRERLQAFEGVVIAKKNRGLNSAFTVRKISSGVGVERVFQTHSPVVAKIEVKRRGDVR RAKLYYLRDLSGKAARIREKLPARKA >gi|333032581|gb|GL891845.1| GENE 66 71232 - 72206 901 324 aa, chain - ## HITS:1 COG:PA2862 KEGG:ns NR:ns ## COG: PA2862 COG1075 # Protein_GI_number: 15598058 # Func_class: R General function prediction only # Function: Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold # Organism: Pseudomonas aeruginosa # 36 320 27 307 311 288 52.0 7e-78 MKRNLIFFCAAILSGLSVSATHATNAEQVKSSFVYSTYAQTKYPLVFNHGMAGFNRVGTD TLGLDYWYQILPDLARNGGNVWATRVSPFNSTEVRGEQLAQQVEEIIAITGKPKVNLIGH SHGGPTIRYVAGIMPEKVASLTTIGAPHKGSPMADVILNVEGTPLSGLATLVNWFSAAIT WAGGLDPNSYPHDSLAGAHSLSTQGSAQFNSQFPMGVPTTSCGEGAYQEKGIYMYSFSGN KALTNPLDPFDIALTGSSLVVDPFGDNDGLVSRCSAKFGKTIRDDYNWNHLDEVNQVMGI RSIFAADPVSVYRQHANRLKLQGL >gi|333032581|gb|GL891845.1| GENE 67 72288 - 73322 920 344 aa, chain - ## HITS:1 COG:PA2863 KEGG:ns NR:ns ## COG: PA2863 COG5380 # Protein_GI_number: 15598059 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Lipase chaperone # Organism: Pseudomonas aeruginosa # 64 331 14 280 288 128 32.0 2e-29 MQRMQKKIGWCVLGFFILSLIACVYWLSPDSENTSPQPNQDEAKSLVATSQSTLNSSLNE NTYLSKSQQDTQVNCQLKIDSSQHLVVNSQTRDCFEYFITQYGESNLQQVKTHFKKFIQD QYLEPARSQIIDLWTRYLKYREQLAQIQPPQSKKQDQNYFQKIFSSIQDIRKRFFSASEI EGLFSTEDIYQNYTLDRMKILEDSSLSEIEKAKKLKERFEQLPEDWQENLQELSKLDDLH TLTKQIKARNGSAEELRQMRTALVGAEATQRLETLDIQRNAWQQRVTGYLNQRDEVLHSN MSDNAKKQAIQQLRQQQFSSSQEQLRLRTFETVHDQGGELPFNY >gi|333032581|gb|GL891845.1| GENE 68 73476 - 74381 745 301 aa, chain + ## HITS:1 COG:PA4742 KEGG:ns NR:ns ## COG: PA4742 COG0130 # Protein_GI_number: 15599936 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Pseudomonas aeruginosa # 10 299 8 302 304 286 51.0 4e-77 MTTKNQKISRRHISGVFLLNKPLGLSSNAALQKVRWLYRAQKAGHTGALDPLATGLLPIC LGEATKFSHYLLDSTKRYQTTVRLGQTTTTGDVEGDILQERPIPVLSKELIEQTLEKFRG DIQQVPPMYSALKKEGKPLYELARKGIEIERETRPVTIYALELIEFTENSITLDVTCSKG TYIRVLGEDIGEVLGCGGHLTMLHRIQTGHFELIPSYTIEYLESLMEEQREALLLPVYAP IDHFLKIQVPEGREKYFCNGLESNIDHSAEAEVLVFSGERCLGLAEITDKKRLVPKRILN L >gi|333032581|gb|GL891845.1| GENE 69 74401 - 75177 764 258 aa, chain + ## HITS:1 COG:RSc3337 KEGG:ns NR:ns ## COG: RSc3337 COG0730 # Protein_GI_number: 17548054 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 15 256 10 251 252 176 44.0 4e-44 MGMEWDVILSLIFFAFTAGAIDAAVGGGGLIQIPGIMSTFPNMSTATVIGTNKVSSIFGT ASAAYTFAKKVKLQWKLLAVIAICALISSFAGAACLSLIPQSVLRPFVFVMLIVIAIYTL VKKNFGQVHTEQKITTKMLILAGIGSLAIGFYDGIFGPGTGSFFIFFFIRFLQVDFLHAS ALSKIGNFMTNLAALSFLIPTGHAILHIGLMMAAANVLGSIVGVRTALKYGSGFVRIIFL ILVSILICRLGYQMFVTG >gi|333032581|gb|GL891845.1| GENE 70 75387 - 75830 563 147 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0335 NR:ns ## KEGG: ABSDF0335 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 147 1 147 147 205 99.0 5e-52 MNIFEALRESHENQRNLSEQLIQTHGLTEERKELFDALKNELYAHSVAEDRYLYIPLMFD DVGLDITRHALSEHHEMDELVEQLEKTDMSSPSWLATAKQLSEKVHHHLKEEEHKFFQQA GKILKDSEKETLGNKYLKEYKKYKKQQ >gi|333032581|gb|GL891845.1| GENE 71 75838 - 76698 794 286 aa, chain - ## HITS:1 COG:PA1360 KEGG:ns NR:ns ## COG: PA1360 COG5006 # Protein_GI_number: 15596557 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Pseudomonas aeruginosa # 6 284 12 286 297 169 41.0 4e-42 MQNLPIIAVLYMILSMVSYQISASFAKQLIAALDPLTVTILRLCFAAVIVAVMFRSWKIW SRLPYLKWRDLLMYCASLGLMNILFYTSLGKLPQGIAVGLEFIGPLGLALVSIKQKSDYI WVAFAMLGIALMVPWQDPTQHHFSYVGAACALGAGLCWAFYIYFGQKVVTQNIGMHALTI GITVSAIALLPIGIWYNGPALLDTQYWGKALVIAVLATAIPYALDLMALKQLNKLTYGTL TSLAPALAALTGFLLLHEEISMLQWVALACVMLASIGVTLRSKTAS >gi|333032581|gb|GL891845.1| GENE 72 76790 - 77674 589 294 aa, chain - ## HITS:1 COG:ECs0891 KEGG:ns NR:ns ## COG: ECs0891 COG5006 # Protein_GI_number: 15830145 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Escherichia coli O157:H7 # 16 290 17 291 295 199 45.0 5e-51 MSSPSQKSQLHALGFLILAMLSVQSSASLAKVLFQNFPVLTVSAMRLCIGAFILAFIFQI WKINFSQVRWKAILSYGFALAGMNALFYLSLERLPIGIAVAFEFIGPLSVALYHAKQKYD FVWVTFAIIGLILLFPFNQAHSLDWIGVLFAMSAGACWALYIIAGQKPSGISGNHTVCLG MTVGACILLPITFFSGSIGQVIELPYFFYFIGLAVLASALPFSLEMLALRNLTPLSFGTL MSLEPAVAALSGFIFLGEYLLWNQWLALATIITASVGCTITTQRARQQREKTVS >gi|333032581|gb|GL891845.1| GENE 73 77773 - 79005 1256 410 aa, chain - ## HITS:1 COG:PA0316 KEGG:ns NR:ns ## COG: PA0316 COG0111 # Protein_GI_number: 15595513 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Pseudomonas aeruginosa # 6 410 5 409 409 579 71.0 1e-165 MSQHLSLPKDKIRFLLLEGVHQNAVDTLNAAGYTNIDYRKTALEGEALKEAIKDAHFIGI RSRTQLTEEVFEAANKLIAVGCFCIGTNQVDLKAAMARGIPVFNAPYSNTRSVAELVLAE TILLLRRVPEKSAACHRGGWDKSAVGSFETRGKTLGIVGYGSIGSQLSVLAESMGMHVIY YDAVTKLPMGNARQVGSLDELLATADVVTLHVPDVPSTRNFFTKEQFAKMKEGAIFLNAA RGTCVVIEDLADAIKSGHLAGAAVDVFPKEPKANGEEFQSPLRGLDNVILTPHVGGSTME AQANIGLEVAEKFVAYSDKGMTLSAVNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLF AEQGINISGQSLMTKGDIGYLVMDVDASASQEALDMLHEVEGTIRVRVLF >gi|333032581|gb|GL891845.1| GENE 74 79385 - 80794 1650 469 aa, chain + ## HITS:1 COG:PA0317 KEGG:ns NR:ns ## COG: PA0317 COG0277 # Protein_GI_number: 15595514 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Pseudomonas aeruginosa # 11 467 6 462 464 664 67.0 0 MNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQE VVKLANQFNIAITPSGGRTGLSAGAVATNGEIVISMDKMNQILEFFPADRMVRVQAGVVT EQLQNYAEEQGMYYPVDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVVTGKGD ILRLNKGMIKNATGYALQHLFIGGEGTLGLVTEAEIKLERQPQNLQVLVLGVPDFDAVMP VLHAFQKDIDLTAFEFFGELAMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAME IFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIPYKNDISVLITHVPAFIRE IDAIVQENYPDFEICWFGHIGDGNLHLNILKPENLTKDEFFAKCQVVNKYVFDTVKKYDG SISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPGKLFDL >gi|333032581|gb|GL891845.1| GENE 75 80889 - 81257 268 122 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03350 NR:ns ## KEGG: ACICU_03350 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 122 1 122 122 223 100.0 1e-57 MQRLFLISALCAGLMTGCATTSKLIPFVGSETPMQQVLKTQPEIVKEHNNTSVQQVFNRV ESPTVSRITVIQTGLMDDSVSAIRTEYLFKLVDEKWQLQNKQKSYQCARGKGSKGFQTQL CS >gi|333032581|gb|GL891845.1| GENE 76 81303 - 81617 430 104 aa, chain - ## HITS:1 COG:STM3180 KEGG:ns NR:ns ## COG: STM3180 COG1359 # Protein_GI_number: 16766480 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 104 1 104 104 140 68.0 6e-34 MLTIIAEIRTQSGGQHRQNVLNAFQKIIPTVLAEDGCHGYEPLVDHISNASFQNKDPDII VMLEKWESVAHLEAHLATPHMQAHHEAVKDDVVDVKIKILESGV >gi|333032581|gb|GL891845.1| GENE 77 81631 - 82218 759 195 aa, chain - ## HITS:1 COG:ECs3910 KEGG:ns NR:ns ## COG: ECs3910 COG2249 # Protein_GI_number: 15833164 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli O157:H7 # 1 193 1 193 193 318 76.0 3e-87 MSNILVINGAKQFAHSNGELNDTLTTLATNHLTELGHEVKVTRADSDYNAEAEVEKYLWA DVVIYQMPGWWMGAPWTVKKYIDDVFTTGHGSLYASDGRSRSDASKKYGSGGLIHDKKYM LSLTWNAPMEAFDDADQFFHGVGVDGVYLPFHKANQFLGMSTLPTFIVNDVIKMPDVDSY VEAYKAHLNTLFAAA >gi|333032581|gb|GL891845.1| GENE 78 82217 - 82324 57 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGVTLIQFLNLSDTLENLLLKKNVVIGKILLIKNH >gi|333032581|gb|GL891845.1| GENE 79 82443 - 82808 286 121 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0337 NR:ns ## KEGG: ABAYE0337 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 121 6 126 126 197 99.0 2e-49 MKKIGLLMMCNLLILSACTPNTNPPTPQANSPIQAVLLDQPNLLNNASNLSISQQMNALE DPSNAQVTILQTEPSEDAVSKTRTEYLLKKDQTVWKIVNKKQSYQCTKGEETADFQVNPC P >gi|333032581|gb|GL891845.1| GENE 80 83178 - 84407 1020 409 aa, chain + ## HITS:1 COG:YPO4048 KEGG:ns NR:ns ## COG: YPO4048 COG0477 # Protein_GI_number: 16124166 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 7 399 9 402 409 280 42.0 3e-75 MKNIQTTALNRTTLMFPLALVLFEFAVYIGNDLIQPAMLAITEDFGVSATWAPSSMSFYL LGGASVAWLLGPLSDRLGRKKVLLSGVLFFALCCFLILLTRQIEHFLTLRFLQGIGLSVI SAVGYAAIQENFAERDAIKVMALMANISLLAPLLGPVLGAFLIDYVSWHWGFVAIALLAL LSWVGLKKQMPSHKVSVTKQPFSYLFDDFKKVFSNRQFLGLTLALPLVGMPLMLWIALSP IILVDELKLTSVQYGLAQFPVFLGLIVGNIVLIKIIDRLALGKTVLIGLPIMLTGTLILI LGVVWQAYLIPCLLIGMTLICFGEGISFSVLYRFALMSSEVSKGTVAAAVSMLLMTSFFA MIELVRYLYTQFHLWAFVLSAFAFIVLWFTQPRLALKREMQERVAQDLH >gi|333032581|gb|GL891845.1| GENE 81 84444 - 86594 1511 716 aa, chain - ## HITS:1 COG:ECs1044 KEGG:ns NR:ns ## COG: ECs1044 COG1289 # Protein_GI_number: 15830298 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 4 712 5 711 720 573 42.0 1e-163 MNNLTQLFNRFKTNSILIYCLQILIVLTGTTLGLLWLGHNELIVPVTLGAIAAALTDFDD RLSLRLRNLLYVCLLFFTVSTILGFLAPYKFLFILYLSISSACFILLGALGQRYATISFG TILLSIYSMFGLGEYAYWYQQPTYFVYGALWYGLTSILFFILKPTLPLQDKLSQIFEEIS ALLQAKARLFDPDNKENVEQLLFKLSLQNTQVAQSLNQIRSSLLTRLKASRVSNKSIYWL NLYFFARDIHEQATSNYLHYEHIQQNFSRSDLIFRFQKNLRLQAQACHDLAQCILHNQQY QSSQESQIGLNHLESSLKDWIQQHPQNFEVKNLKLIFNNLKGMHEQFEQLQYAQPFNETL SQNKQEHLNLLDDDIQGFSDLVLKIRQQLTPQSALFRHAVRIAVVFAAGYAISLLPFAQH GYWILLTSLFVCQITYFATKSRLKLRTIGTLLGVLLGIPILYFVPSIEGQLILTIICGVS FFYLRQKKYALATLMATLMVLLIFNLKGAGYSIILPRLIDTLLGCFIAWLAVNFIWPDWN FRNIPNNIKKSSQATFDYFNVIVEQYQHGKNQDIEYRRIRRAAHNAQIELSNMISSLSAE PNPNPELIHYAFRYLVYSHSQLSYVAALGSQRQKIDDQQVLQLLLDCQQILKQSLFEQAS VNFSFLEQTLKQIQSLITHEHFSENYTLVLKQMSLLLETLPELLSLKGKLLEHEIK >gi|333032581|gb|GL891845.1| GENE 82 86788 - 87363 797 191 aa, chain - ## HITS:1 COG:STM0924 KEGG:ns NR:ns ## COG: STM0924 COG2032 # Protein_GI_number: 16764286 # Func_class: P Inorganic ion transport and metabolism # Function: Cu/Zn superoxide dismutase # Organism: Salmonella typhimurium LT2 # 46 191 26 174 174 155 58.0 5e-38 MPVFNKIGAVCALTALLTVGCSTVSKTVSDTAHALTTMHTKKVVDVNEVTANGIGKKLGT ISFQDSDKGLIITPALADLPSGTRGFHIHENPSCAPAVKDGKPGAALAAGSHYNPNQAPH HGTPTTGHLGDLPALVVDNTGVATTAVIAPRLKLADIQGRAIMIHAGGDNYSDSPLPLGG GGARIACGVIK >gi|333032581|gb|GL891845.1| GENE 83 87479 - 88597 1170 372 aa, chain - ## HITS:1 COG:SMc02160 KEGG:ns NR:ns ## COG: SMc02160 COG0628 # Protein_GI_number: 15964239 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Sinorhizobium meliloti # 16 353 39 379 392 166 31.0 8e-41 MHPYAPTLQRVLLFGLFFILIFLGFNILKYFIVPVLWAAIIAYMTWPIYLRIQHFFGENR NNLNATVMISLVILIVGVPFTCAIFILQHEGRNLYFDLQRQVFSGHLSVPDFIRNLPFIG KEISRTLNEINTDPNSTIQNIAAWVQSHLSYGRVLLNEISKNIVKLCFAILSLFFFYRDG HTILTQVSKALEMVIGPRIHHYLDTISETTRAVVYGVGLTAIAQAVLAGLSYFVAGVPNP MVLTIATFLLALIPFGTPVSYLGVGLWLFSQGQTMEAIGVILWGVLIVSSSDNVIRPLVI SGATQIPFLLIMFGVLGGIASFGLVGLFIGPVILAVLLAIWREWLHETIDPEPMPKTTMI YDSDDDLPPSKN >gi|333032581|gb|GL891845.1| GENE 84 88720 - 89364 719 214 aa, chain - ## HITS:1 COG:RSc2389 KEGG:ns NR:ns ## COG: RSc2389 COG1192 # Protein_GI_number: 17547108 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Ralstonia solanacearum # 1 204 1 203 217 115 31.0 7e-26 MKTILIANQKGGCGKTMTAITLATALAQKGYKVALADSDNQKSSLQWLKQRPDNVAVIQS LDWRQEKSIGDAPKNLDYLIIDAPGALSGDHAEQLVSEAHAIITPLQPSFFDIDSTRRFL KHLQDIKRIRKGKVQILLLANRVKPNSASSKDIQQFFEKIEHEPIAWIAERSAYGSLAMQ GLSVFDKPQKNFIAIQSQWQPLLNKLIEDKSEWF >gi|333032581|gb|GL891845.1| GENE 85 89523 - 89990 503 155 aa, chain + ## HITS:1 COG:TVN1166 KEGG:ns NR:ns ## COG: TVN1166 COG4741 # Protein_GI_number: 13541997 # Func_class: F Nucleotide transport and metabolism # Function: Predicted secreted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Thermoplasma volcanium # 19 152 42 167 176 89 38.0 3e-18 MSVWLAMLIGAGIGIIITTLILSNTRNGRIKAEYEQYIAELELEHQQALAQAQKRSVNTS RAVLKGKMAEQFAPVLPEFQYLPSDAKFMGDPVDYIIFDGYTDFRDGDGTADDIQIILLD VKSGGARLTKGQQAIAQAIKEGKVRFETLRIDFED >gi|333032581|gb|GL891845.1| GENE 86 90130 - 90693 570 187 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000371 NR:ns ## KEGG: ABBFA_000371 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 187 1 187 187 372 99.0 1e-102 MKKQRLMIALLATLGMGSALASTSSEYNIANGLLPVEKDQSISVLQPFQGNFRILGSKIY HNDEQAKFSPIDYAVSWGLFAQPEIARHISVKQYDRYLNWKIAKLPVPAEQAMQMVSNMH IIPANPEIAQQIKQVKRGDLVYLKGDLVEIKDKDLVWKSSLTPTDTGDGACELFRVQSIH WVEKQNI >gi|333032581|gb|GL891845.1| GENE 87 90743 - 91276 608 177 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03339 NR:ns ## KEGG: ACICU_03339 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 177 1 177 177 260 100.0 2e-68 MLKKTPHIILMSLLSSSLLLTACKKADEPAKTEQSHTSSSTDQVLEKLNERPVKKFPATA DDAHDIALLEDYDHRFTEMSDEMENELAKLHEAGTLTAEFEQKRTLDNVRSSLTMLKDLD LKTEQGRYIQGLLYQYWENQEKNFSDKQASKDEQVKQLADYLQAQNQLKYWKASQQH >gi|333032581|gb|GL891845.1| GENE 88 91292 - 92086 511 264 aa, chain - ## HITS:1 COG:PA0558 KEGG:ns NR:ns ## COG: PA0558 COG0500 # Protein_GI_number: 15595755 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 4 252 3 250 255 216 42.0 3e-56 MTQSLHPAAQKGFSSAAELYQQVRPNYPVEIVSWLQDRLQIHENSTVIDLGSGTGKFLPY LKQTHANITAVEPIGEMLQQLQQAYPDIKTIQAFSHNIPVNDQQIDAVICAQSFHWFDNI ETLTEIHRVLKPQGHLGLVWNQRDESTDWVKALADFLLPLEGDTPRYHSERWKKVFEEQD LFTFDNLNTFSQSQHGTVEQVVSKRLLSTSFIAAMTEKDQLQLKAKFEKIVYDFTGLGPQ DQIVFPYITYAYHFQKSTSSNHRE >gi|333032581|gb|GL891845.1| GENE 89 92214 - 93491 1135 425 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03337 NR:ns ## KEGG: ACICU_03337 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 425 1 425 425 788 100.0 0 MDKQIIFEDEHIRAIFLQGDSNILVLSFGDLITRASGLSINAEKSLIKYQYSVIGVMPKQ KSWFPKASMVELAKVILPIIQRFKNIVGYGGSMGGYAAIKYSNLLNMNRIIAFVPQYSID PEQVEDRRYAEFFDAVANKDMQIQPQDVDASREYIIVYDPYFSIDREHYLKIKEILPSLH TIHLPFTGHEALSVLASSSLLHDFIEHEFDETYFYQQVRKIKKQSKFYYRNVLANVLTYH DSMLLKILRQNDFQLDERYLDNALKQAVSRSLIKTKQATEQDFQKLGIKIQYSQQAENPK KGFKNQFEAILVFNLINLKLETYAVDVVLANPSYLIPIVAEHTGVVQIELNNELYLLGMN DRKIIKLFKQGDALTSDMSPFVIKQYSDFFALSYKQLNLNCDEQGVCDYVEGSVQPSQQF VLTSY >gi|333032581|gb|GL891845.1| GENE 90 93995 - 95338 1046 447 aa, chain + ## HITS:1 COG:BS_ybgF KEGG:ns NR:ns ## COG: BS_ybgF COG0833 # Protein_GI_number: 16077309 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 1 447 23 465 470 452 53.0 1e-127 MISLGGAIGTGLFLGSGDVISQAGPIGAIISYFLGGLIAYTVMLCLGELAVHVPESGSFG EYARRYIGPGTGYMITWLYWLTWTATLGTEFTAAALLVQEWFPSTSVWAWTLFFGALVFF LNVSSTRLFAESEFWLALVKVITIICFIGLGLLAIFGFIPYQGHETAPLFSNLTAHGWFP NGLFPIFATMLIVNFAFSGTELIGVAAGEAENPAKTVPKAINAAIWRLLIFFVGTIVVIS SLLPYHLAGLSANDVSSSPFVTVFNYIGIPYAEDIIRFVIITALLSAANSGLFAASRMMW SLSAKNQLPKIFAKLTPSGTPIIAIIVTMFGAIPGLLSEQFAPETIFKNLLGVAAFTMVV VWIAICISQFNFRRQWYKSGKTVKDLRFAAPLFPLTPIVGGLFCIVTCISMVFDPSMQVG FICCIIFILLCYVSYFIFYRKKDIAQN >gi|333032581|gb|GL891845.1| GENE 91 95574 - 95729 95 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEIKKILKLKMIKKLPFNNKDLINKKFQKILKISINFHNIYSVSLIQNKDI >gi|333032581|gb|GL891845.1| GENE 92 96362 - 97633 1738 423 aa, chain + ## HITS:1 COG:STM1795 KEGG:ns NR:ns ## COG: STM1795 COG0334 # Protein_GI_number: 16765136 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 423 18 441 441 616 71.0 1e-176 MSDLSYVNEHSDAWQTYLAQIDRVAPYLEHLADYIDTLKRPKRALIVDVPIVMDDGSIQH FEGYRVQHNLSRGPGKGGVRYHPNVDLNEVMALSAWMTIKTAVLNLPFGGAKGGIRVDPR KLSNRELERLTRRYTTEIGHIIGPQKDIPAPDVGTNANIMGWMMDTYSTSQGHTVTGVVT GKPVHLGGSLGRVKATGRGVFVTGREVAAKINLPIEGAKVAVQGFGNVGSEAAFLFVESK AKITHVQDHTGTIFNADGIDLVALRDHVNANQGVGGFAGAQAIADEDFWTAEVDIIIPAA LEGQITVERAEKLKAKLILEGANGPTYPKAEDVLVERGIVVVPDVVCNAGGVTVSYFEWV QDMASYFWSEEEINERLDKLMVQAMDDVWNTANKNACTLRTAAYILACERILKARKERGI FPG Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:48:30 2011 Seq name: gi|333032580|gb|GL891846.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld61, whole genome shotgun sequence Length of sequence - 22798 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 13, operones - 6 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 382 - 468 71.6 # Leu CAA 0 0 + Prom 486 - 545 3.7 1 1 Tu 1 . + CDS 651 - 1688 1142 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) + Term 1697 - 1751 11.7 + Prom 1695 - 1754 9.0 2 2 Op 1 . + CDS 1842 - 2870 790 ## ACICU_03162 hypothetical protein + Prom 2878 - 2937 4.8 3 2 Op 2 . + CDS 2958 - 3527 723 ## COG1704 Uncharacterized conserved protein + Term 3545 - 3581 2.1 + Prom 3535 - 3594 2.3 4 3 Op 1 15/0.000 + CDS 3703 - 4836 1233 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase + Prom 4852 - 4911 2.4 5 3 Op 2 25/0.000 + CDS 4935 - 5264 459 ## COG1862 Preprotein translocase subunit YajC + Term 5275 - 5304 1.2 6 3 Op 3 31/0.000 + CDS 5316 - 7217 2122 ## COG0342 Preprotein translocase subunit SecD 7 3 Op 4 . + CDS 7229 - 8191 1298 ## COG0341 Preprotein translocase subunit SecF + Term 8217 - 8247 1.0 - Term 8203 - 8233 1.0 8 4 Tu 1 . - CDS 8255 - 9508 1568 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase - Prom 9534 - 9593 2.8 + Prom 9353 - 9412 3.1 9 5 Op 1 . + CDS 9621 - 10328 535 ## COG2003 DNA repair proteins 10 5 Op 2 . + CDS 10390 - 11301 929 ## COG3781 Predicted membrane protein 11 6 Tu 1 . - CDS 11309 - 12160 844 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 12198 - 12257 8.3 + Prom 12118 - 12177 4.1 12 7 Op 1 3/0.200 + CDS 12205 - 12819 699 ## COG2917 Intracellular septation protein A 13 7 Op 2 . + CDS 12854 - 13156 446 ## COG2350 Uncharacterized protein conserved in bacteria 14 7 Op 3 . + CDS 13161 - 13640 497 ## ACICU_03174 hypothetical protein 15 7 Op 4 . + CDS 13664 - 15535 1590 ## COG4121 Uncharacterized conserved protein + Term 15568 - 15594 -1.0 - Term 15555 - 15581 -1.0 16 8 Tu 1 . - CDS 15587 - 15901 533 ## AB57_3427 rhodanese domain protein - Prom 16116 - 16175 5.8 + Prom 15831 - 15890 3.5 17 9 Op 1 . + CDS 15993 - 16481 571 ## COG1666 Uncharacterized protein conserved in bacteria 18 9 Op 2 . + CDS 16517 - 17011 626 ## ABBFA_000536 hypothetical protein + Term 17015 - 17067 13.5 - Term 17003 - 17050 12.2 19 10 Op 1 . - CDS 17051 - 17473 414 ## COG1607 Acyl-CoA hydrolase 20 10 Op 2 . - CDS 17475 - 17912 395 ## COG0526 Thiol-disulfide isomerase and thioredoxins 21 10 Op 3 . - CDS 17913 - 18809 832 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 18893 - 18952 5.6 22 11 Tu 1 . + CDS 19002 - 19337 468 ## COG3453 Uncharacterized protein conserved in bacteria + Term 19350 - 19388 5.2 - Term 19576 - 19610 3.2 23 12 Tu 1 . - CDS 19619 - 21085 1204 ## ACICU_03184 hypothetical protein - Prom 21144 - 21203 10.2 + Prom 21075 - 21134 8.9 24 13 Tu 1 . + CDS 21242 - 22615 1490 ## COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes Predicted protein(s) >gi|333032580|gb|GL891846.1| GENE 1 651 - 1688 1142 345 aa, chain + ## HITS:1 COG:VC0739 KEGG:ns NR:ns ## COG: VC0739 COG0809 # Protein_GI_number: 15640758 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Vibrio cholerae # 1 342 1 347 352 390 56.0 1e-108 MQLSDFSFELPDELIARYPLETRSASRLLHLDAKGQYHDHMFTDIIDLFEEGDLLVLNDT KVMKARLKGKRATGGAIEILVERMLNHTTAYCHIKASNSPKAGAELFVGEDNIPVIVRGR HENLFVVEFSQPILPVLEQYGQLPIPPYFNREAEEIDTERYQTVFHNPEKIASVAAPTAS LHFDEELLAKLDQKGVKKTFVTLHVGAGTFMPVRTDDITNHVMHSEWCDVPQETIDLILA TKARGNKVIAVGTTATRALESAAQAHGGKIAAWTGDTQIFIYPGYEFCIVDRLITNFHLP ESTLLMLVSALSNRENILAAYEHAVKDRYRFFSYGDAMLIDKLEV >gi|333032580|gb|GL891846.1| GENE 2 1842 - 2870 790 342 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03162 NR:ns ## KEGG: ACICU_03162 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 342 1 342 342 658 100.0 0 MPIDTAQQALHIRRKKNTQVFRNIARLWDAGQKSQTDQELLNALHPWREDHNLRFVNTLS YLLSICSITTLLFGYFFHPHIQYSWSLLWAFLTGFLAYLLYEPQKPLTEVIHYLEQHMTA LRYGLKFQQLPAYLPIQAQPILVLSKLKQHFPLFNRGNEANEITEFASVTWNDGITDHQV LLFKYHYVNNLPILQDQNSDKKIVKEIHKDLWGAFIFQILALGIAVSNQRSRFFEPYLSE WQSSDILINQELSIFGTDQHQLAKEMSPSLTLKLHDFFQHFSGDLIYHHEEQILCYLGEQ DLFQTISKRSEIHDIPALRGHLRTMTMPQYEKFQQFMLNLIK >gi|333032580|gb|GL891846.1| GENE 3 2958 - 3527 723 189 aa, chain + ## HITS:1 COG:MJ1576 KEGG:ns NR:ns ## COG: MJ1576 COG1704 # Protein_GI_number: 15669772 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanococcus jannaschii # 8 164 18 166 189 69 28.0 4e-12 MTGLFIFLGIFVVLIAWGIHIRNNIVRYFNATKRAWAEVANFERQKVKTLEALETTLNQY TQFEKSTLEQVTALRQQILSLNVDHTDIAQLQQIEKMSKELIHSLNVVVENYPELKADTL YGKMMDDIQEQNENVGAAISIFNRNVEVFNNQIEVFPNNIINTMTLSKKTIRPFRDNLAT DNFDYKPNF >gi|333032580|gb|GL891846.1| GENE 4 3703 - 4836 1233 377 aa, chain + ## HITS:1 COG:PA3823 KEGG:ns NR:ns ## COG: PA3823 COG0343 # Protein_GI_number: 15599018 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Pseudomonas aeruginosa # 1 372 1 369 372 586 73.0 1e-167 MKFEKLGQSGRARRGRLTLEHGVVETPVFMPVGTYGTVKGMLPRDIEDIQAQIILGNTFH LYLRPGLEVIKQHGGLHDFIKWNKPILTDSGGFQVFSLGAMRKIKEEGVTFRSPIDGSKV FLSPEISMEIQHVLNSDIVMIFDECTPYPATHEEAQKSLQLSLRWAKRCKTHHHDELKNK NALFGIIQGGMYEDLRDESLNGLLEIGFDGYAIGGLSVGEPKEEMIKVLDYLPNKMPHDK PRYLMGVGKPEDIVEAVRRGVDMFDCVMPTRNARNGHYFVTDGLVRIRNSKYRHDQGPLD PHCDCYTCKNFTRAYLFHLEKCGEMLASMLGTIHNLRYYQRLTEGMRDALDNGTFDEFVQ DFYARRGLEVPPCPVDE >gi|333032580|gb|GL891846.1| GENE 5 4935 - 5264 459 109 aa, chain + ## HITS:1 COG:YPO3190 KEGG:ns NR:ns ## COG: YPO3190 COG1862 # Protein_GI_number: 16123352 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YajC # Organism: Yersinia pestis # 1 109 1 111 111 97 51.0 6e-21 MSLFISTAHAAPAAAQSPGLLPNILMIVVFVAIFYFLIWRPQAKRAKEHRSLIESLGVGS EVVFAGGLMGKVTKLEGDYAVVELNRGVEVKIQRASVISVLPEGTLNNL >gi|333032580|gb|GL891846.1| GENE 6 5316 - 7217 2122 633 aa, chain + ## HITS:1 COG:PA3821 KEGG:ns NR:ns ## COG: PA3821 COG0342 # Protein_GI_number: 15599016 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecD # Organism: Pseudomonas aeruginosa # 2 633 4 620 620 579 50.0 1e-165 MRYPAWKYLLILVVLVVSTLYALPSLYPDEPAVQISGAKAGTQIDQSVVQKAEQILKTAN IASHDNTFTNNAALLRVSSSEAQLKAKEVLRRDLGDQYVVALNLAPTTPEWLQKIGAKPM KLGLDLRGGVHFLLEVDMDKAISQRMETSATDLRRQFRENKIKFNNLALNNNVITVQFAD NADRDAAMDFLRRNGNEYTQQALASTTGSILKLTYTDVRRQEIQAYAVNQNLTTLRNRIN ELGVAEALVQSQGSNRIVVELPGVQDTAEAKRVLGRTANLEFRLVSDLNDQYIDPYTGKY NGQPLPPGTEVFAYQSLDSGRQLLLQRNRILTGERVQNASSGFSQDSGGAEVNITLDSAG GKLMSDATRNAVGKRMAVLFIENKQKISYVTDPKTGAQTEVRTPYTESVVINAATVQAVL GSTFRITGLSSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLSTQIGFL LVAIWMVVFFRLFGLIANFALVFNLAMILTIMSWIGASLTLPGIAGIVITIGMAVDANVL ICERIREEMLWGASPKQAIVAGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKGFAVTLM IGIICSMFTAITVTRAIVQIIYGKRRNLKKLSI >gi|333032580|gb|GL891846.1| GENE 7 7229 - 8191 1298 320 aa, chain + ## HITS:1 COG:PA3820 KEGG:ns NR:ns ## COG: PA3820 COG0341 # Protein_GI_number: 15599015 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecF # Organism: Pseudomonas aeruginosa # 21 320 8 306 306 237 46.0 2e-62 MTKVTQQPSKQYGRPDDAKIIPFMKIAKPAAIFSILITLASIFFIATKGLNLGLDFTGGV SAELNYAQPANQAEVIQALDKAGFKDAVVQTLGSNKDLLVRMPVQDIKVEDLNNAITKAV QLPNNAAEVHKVDSVGGQVGNELYVRSAGAVALALILMLIYVTIRFEFKLAMGAVMSLFH DIIIIIGAFALFQWPFDLTVLAAVLAVIGFSLNDNIVVSDRIRENFRKIRGATPREIVDI ALTETLRRTIHTSMTLLLVVLAMMFLGGDGLHWFSVAMFVGVFVGTYSSIYIGTAFALWR GLNRQDFIVQVKPEFEDEIP >gi|333032580|gb|GL891846.1| GENE 8 8255 - 9508 1568 417 aa, chain - ## HITS:1 COG:PA5320 KEGG:ns NR:ns ## COG: PA5320 COG0452 # Protein_GI_number: 15600513 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Pseudomonas aeruginosa # 11 417 7 402 402 416 57.0 1e-116 MSFDLSVIPHKNIVLAVTGGIAAYKSAILVRRLKDYGFDVRVVMTHGAQAFITPLTFQAL SGNPVHTELLDPEAEAGMGHIELARWADLLLVAPASCDTLAKFANGLADDLLSTLFLATK APVWVAPAMNQQMWAAKATQRNLQTLVEDGVHVIMPDAGEQACGDVGLGRMPEPEEIARQ VAGYFHQAQRAIAEKFGLLAGKRVVITAGPTREAIDPVRYISNHSTGKMGFALAAACYAA GAKVTLIAGPVSLDTPNGVQRVNVASARQMLDVSMESLETGCDIFIATAAVADYRVAEVA EHKIKKAGDELNVSLVKNPDIVATIAAQEKRPFMVGFAAETQNVEEYAAGKLVAKKLDMI ACNDVSRADIGFASDENAMTVFFAESYHMKKRELEKASKQEISQQLVEAISDALRRK >gi|333032580|gb|GL891846.1| GENE 9 9621 - 10328 535 235 aa, chain + ## HITS:1 COG:PA5319 KEGG:ns NR:ns ## COG: PA5319 COG2003 # Protein_GI_number: 15600512 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Pseudomonas aeruginosa # 4 223 2 220 224 186 46.0 2e-47 MNTSIKNWPEQERPRERLLQQGPQSLSDSELLAIFLRSGSRQHSAVELARLLIQQFGSLN AVFDASYNELAQFNGIGATKYSQLLAVKELGRRYLDYHFSQTELSLHSSHLVLDYLRYEL KGEKQEVFAVLCLDAELRKLHFKKLFFGSVQHCAVSVNQTLRYALQQHACQLVIAHNHPF GSAQPSLEDIKLTQQLEQACQLVEIRLLDHFIISPEGSFSFAEQQLLNPTSIAVQ >gi|333032580|gb|GL891846.1| GENE 10 10390 - 11301 929 303 aa, chain + ## HITS:1 COG:STM1527 KEGG:ns NR:ns ## COG: STM1527 COG3781 # Protein_GI_number: 16764872 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 284 12 294 315 210 41.0 3e-54 MIVREQPSIFKVLFSWRGTILPKILPSLGVVMLISAIIGGVEYINLYRFPEIPLVGFTLI GVVLSIFLGFKNTACYDRWWEARKLWGVLIATSRHFDRDCRILTQARRERVIQHVIVFAN VLRDRLRRQTANPTELIQTSGMSQQALTQLYQQNNAPQYTLSLIQWELLQALKEGEISDI IYAQMNKNVADLSVVQTGCDRIANTPIPFAYSVLLNRTVYFFCFMLPFSLGSLLGLATPL LVGILAYTFLGLDALSTEIEEPFGTQSNDLPLDAMVRSIEIELLGTLGKPTPPPIQAQDN NLL >gi|333032580|gb|GL891846.1| GENE 11 11309 - 12160 844 283 aa, chain - ## HITS:1 COG:HI1400 KEGG:ns NR:ns ## COG: HI1400 COG0613 # Protein_GI_number: 16273309 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Haemophilus influenzae # 5 282 6 274 274 176 38.0 6e-44 MQGIDLHTHSNISDGTLSPELLVQAAVDVKLHTLALTDHDTMDGLQRAKNAAQPHDLQII SGVEISSQWSRPSTKKSYGVHIVALNMQDEAPILEALEQQKRIRAQRAEVICELLKKCIG FDIYQDVLDKVENQPDRITRTHIAKALVEKNVVSRPQQAFDRFLKEGKRAFVKFEGLGLK ETIEVIHNSKGFAVLAHPTRYDLSATNTRYLIEIFASYGGDAVELPPPVDPLSTRQMIDR MIEQHHLAISIGSDFHGENMPWIKLGNTPKPASNQQGIWERFI >gi|333032580|gb|GL891846.1| GENE 12 12205 - 12819 699 204 aa, chain + ## HITS:1 COG:PA3201 KEGG:ns NR:ns ## COG: PA3201 COG2917 # Protein_GI_number: 15598397 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Intracellular septation protein A # Organism: Pseudomonas aeruginosa # 1 203 1 188 195 101 33.0 1e-21 MKALLDFVPLIIFFYLYKTVDPADTQHPLLKLIGSAGGVDNNNILVATTGLIISMLVVYG ALFIMQKFRLDKQQWIVLFMTVIFGGITLMLSDDFYIRLKAAILNLVFAGAFLVSPWFGK DRKPLIQRLFDPILALSEKGWKNLNFAWAAMFVVMSGLHVFFAFLFHGGKYWGEFTAFGD MIVMFSFIIIQFIILRKHFKSPDA >gi|333032580|gb|GL891846.1| GENE 13 12854 - 13156 446 100 aa, chain + ## HITS:1 COG:ECs1751 KEGG:ns NR:ns ## COG: ECs1751 COG2350 # Protein_GI_number: 15831005 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 3 97 34 130 130 103 52.0 1e-22 MPFFVLSCTDNEGTLEKRLAVRPQHIERLQKLDDEGRLVAAGAMPKDPNDPQAGFYGSTM IVEFDTREALDEWLKEEPFLKEGIYSHVDVKPFNKAFPKG >gi|333032580|gb|GL891846.1| GENE 14 13161 - 13640 497 159 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03174 NR:ns ## KEGG: ACICU_03174 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 159 211 100.0 8e-54 MQLATKSFLGLCLICSTAGAVEPAATPATPPTAASTQNAKPAPTSATVAKPATTTAPTST QPLTAEQIAKNKQQQDAKIKALVQDQASRLKQLEHANLEALAQNQELQLKNDNLSVQVQV LQSERSAQMFLYGAVTLAGGVLLGFFIASYVYTKRRRQW >gi|333032580|gb|GL891846.1| GENE 15 13664 - 15535 1590 623 aa, chain + ## HITS:1 COG:Z3587_1 KEGG:ns NR:ns ## COG: Z3587_1 COG4121 # Protein_GI_number: 15802871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 3 242 22 263 275 219 47.0 1e-56 MNKSNRIQTAELDWESIDGIEVPISKQFGDVYFSKDNGLLETRHVFLNGNDLSERLANLQ DFEYFSVGETGFGTGLNILALWQLWQQVRPNNHSHLHAISVEKFPLSKADLIRALNVWDE LRPLSKQLIEQYPFPLAGCHRLSFPEERFSIDLWLGDAQDIFPSMVKTKAVNAWFLDGFA PSCNPDMWEQNVLNNIVRLSDYGTTFASFSVAGILKRGLKAHGVDITRPRGFGHKREMLK AVWKAPVSEEILLEPVRDTFQFTQQRIAVIGAGIAGLSTAWAFAQRGHQVTLFERTVPLS GASGNPLALLNPKLCPIEQSHEHLMTLSWQHALNFYKNFQAFRPIQIQQMALKNAQDLLD LADQYPADIVTQQTSSLESDYPHILLTEAGAVSPHQLRDEILQHPGIELKIANITTLISF ENKVQLKSGNETTLEADHVVVCCARESAALFENYPLLKPIRGQVSWVDNSFATLPLNEAY SYGGYCMQLNTSELILGASFYPNRDDQEVLLDDHVHNFELIHSVFPHYAKQLPPVEQWQG RASVRAQSPDYFPLVGKMQNESRISTFAGLGSKGFLFAPLCSEVLVAQILGEACPVPKSL LQKLDAQRFQKKVKPKKPYFKSQ >gi|333032580|gb|GL891846.1| GENE 16 15587 - 15901 533 104 aa, chain - ## HITS:1 COG:no KEGG:AB57_3427 NR:ns ## KEGG: AB57_3427 # Name: not_defined # Def: rhodanese domain protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 104 1 104 124 205 100.0 6e-52 MIRKQEITTFEFPENAVIWDVRDSSAYAEGHVKGAVSRPINDLNADILNQVAADQPIYIL CGGGSKAPRAAEKLEGLDASREYVVLMGGTRAARDAGLPLEQGA >gi|333032580|gb|GL891846.1| GENE 17 15993 - 16481 571 162 aa, chain + ## HITS:1 COG:PM1656 KEGG:ns NR:ns ## COG: PM1656 COG1666 # Protein_GI_number: 15603521 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 162 1 163 163 147 52.0 9e-36 MPSFDIVSELELFEVNHAVQNTQKEIATRFDFRGHDVSIELNEKNKEIKISTESDFQCEQ VYNMLENHFYKRKIDVQALDPQKATASGKNFVQVIKLKDGLDSDTAKKINKAIKESGIKV QSSIQGDKIRVTDKKRDTLQQVMAFLREQQFGLPLQFNNFKD >gi|333032580|gb|GL891846.1| GENE 18 16517 - 17011 626 164 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000536 NR:ns ## KEGG: ABBFA_000536 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 164 1 164 164 323 99.0 2e-87 MSQSNRLLKLVKATSKFPKGIRSTLWSKAFGRIVPMVGTANIRYLEVDVNHVTVRLENQK NMQNHIKGVHAAAMALLAETATGFLTGLHIPDNRILLIKSLHVDYLKVVEGGLTATATLS TEQQKYIADHEKGELVIPVTVIDDAGNEPIQCQMLWAWLPKRKK >gi|333032580|gb|GL891846.1| GENE 19 17051 - 17473 414 140 aa, chain - ## HITS:1 COG:NMB0925 KEGG:ns NR:ns ## COG: NMB0925 COG1607 # Protein_GI_number: 15676820 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA hydrolase # Organism: Neisseria meningitidis MC58 # 7 134 10 141 148 137 47.0 6e-33 MSEAYTKPEGILSLQTIAMPADTNWSGDVFGGWIVSQMDLAGAIHAERFSRGRCATISIN QMTFLVPVKVGFVISCYTKILKVGNTSIQMQIEVWDSHDDSRAPIRITEGVFTFVAVDVK GNKRQIPEEAKQKFLASQES >gi|333032580|gb|GL891846.1| GENE 20 17475 - 17912 395 145 aa, chain - ## HITS:1 COG:YPO3270 KEGG:ns NR:ns ## COG: YPO3270 COG0526 # Protein_GI_number: 16123427 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Yersinia pestis # 1 142 1 142 145 113 39.0 1e-25 MIIVCASCDAKNRVPEEKLTAQPSCGQCHQPLLPLEPIELNEQNFSNYITNSDLPILIDL WAEWCGPCKMMAPHFAQVAKQNPRVIFAKINTEESPRLSQAFNVRSIPTLVLMNKTTEVA RMSGALRAPELQQWLDQQLQTNFGS >gi|333032580|gb|GL891846.1| GENE 21 17913 - 18809 832 298 aa, chain - ## HITS:1 COG:AF1563 KEGG:ns NR:ns ## COG: AF1563 COG1073 # Protein_GI_number: 11499158 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Archaeoglobus fulgidus # 30 291 37 289 294 158 34.0 1e-38 MHAYTVEPLYVPCDQEMIAADFYIPKTNNKSAVIIMAHGFAGLRQFKLIQYAQRFAQAGY AVILFDYRYWGGSTGKPREMISINSQLEDWKTMIQYASTCKFIDNRRIVLWGTSLSGGYA LSLASELKNIQAIMVQIPYVDGAETAKLYPLQRYPQALKLSSQDYMGSKMGLNPKRLPVV DQYKLCFMPTADSYYGYLSIVNPDYYWSGEVPARVFFNLMRYRPIQLVRQINIPVLFIAA QHDSLIPIESSREAATNIAPFVSYHEWDMKHFDIYHGSWFEKAVTTQLEFLHQHIGVM >gi|333032580|gb|GL891846.1| GENE 22 19002 - 19337 468 111 aa, chain + ## HITS:1 COG:mll8311 KEGG:ns NR:ns ## COG: mll8311 COG3453 # Protein_GI_number: 13476863 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 1 105 6 109 112 86 45.0 1e-17 MSENVGFAGQIGPEHVGQVVEKGFKSIINNRPDMEGGPEQPTSAQIEEAARQAGLDYVYQ PVVAGQITELDVRTFANHYNELPKPVLMFCRTGNRSNNLYQLAKQMDLLDD >gi|333032580|gb|GL891846.1| GENE 23 19619 - 21085 1204 488 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03184 NR:ns ## KEGG: ACICU_03184 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 488 1 488 488 746 100.0 0 MYKKQLTLKLSAIAVSIMLASCGGGGGDGYYQNGSSNNSSSGSNNSGSQQATATALKIEL DKLSVAATNDTLTVTVRALDKNKGGVAGANVTLELDDPTNNVSIEGVSTQTTDAAGNAIY IIKTPKTSSSINELVKNGFKLKVSTNNGTLTQEQTVTVTGSNSTVEADTTSIVLFDATKT SLNVRGDQTTVTLTAVDANGATLANQAITLKVRNSVLNGVKFTPNATQTDVNGQISYTLS FSENQRTSSYSAGQFVTDDLVLEANFGQSTKIYTYKLDVVNSDVPVAVGAIAVAYNPTTM EDSSDGVYYYKNISVQVTDVDGKPIPNQDVVMGVNALAYYKGRYGFVDTSNPTDGKPDEY LPVIRTACTSPVQAVNVNGDVINQLKPLKENSTVQVVSYINSAGTAATNNKYTTDANGRF DLKIQYPKIYASWLTVQLTAKSTVSGSLIKGSTSLTLGYLTKDVSLTDLNGPNMESPYGI DPNCSNGN >gi|333032580|gb|GL891846.1| GENE 24 21242 - 22615 1490 457 aa, chain + ## HITS:1 COG:VC2638 KEGG:ns NR:ns ## COG: VC2638 COG1249 # Protein_GI_number: 15642633 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes # Organism: Vibrio cholerae # 3 456 7 467 484 345 38.0 9e-95 MFDIIIIGAGTAGISAYKEAVKHTNNILIINDGPWDTTCARVGCMPSKVLISTANRMHDI QNAQEVGLSASADISTDQVMEHVRTLRDRFTKATVKDVEQWPTEHKISGKAHFIDAKTIE VNGKRYQSKSFILAVGSTPNYDQTWKQELDDRLITTDQIFELNTLPKSITIIGSGVIALE IAQAMHRLGVETTIFARSKRIGTFTSPKLQQLAQEELSKELNFLFETLPHEVKSTSDGVI LNYKINEKEESIQTEYVLSATGRSSLLDTLKLENIDKSFKDIKLLPVNAKTKQLDNYPIF IAGDAYTSTPLQHEAAHEGKKVVHNCLNYPQVNAVKTLTPLGIVFSHPEMAIVGQSYKQL KDNGVDFVTGEASYERQGRAIVLGKNKGAIEVYIERGSQKLLGAELFTEATEHMAHLLSW IIGEELTLNDILEKPFYHPTLEEGLRTALKHARRQLK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:49:17 2011 Seq name: gi|333032579|gb|GL891847.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld62, whole genome shotgun sequence Length of sequence - 90190 bp Number of predicted genes - 90, with homology - 89 Number of transcription units - 55, operones - 15 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 6 - 65 3.6 1 1 Tu 1 . + CDS 185 - 610 221 ## ACICU_02049 hypothetical protein + Prom 665 - 724 5.5 2 2 Tu 1 . + CDS 751 - 1182 567 ## COG0517 FOG: CBS domain + Term 1192 - 1232 8.4 - Term 1180 - 1220 8.4 3 3 Tu 1 . - CDS 1233 - 2441 1450 ## COG4992 Ornithine/acetylornithine aminotransferase - Prom 2585 - 2644 3.8 + Prom 2518 - 2577 5.1 4 4 Tu 1 . + CDS 2669 - 3010 521 ## COG0278 Glutaredoxin-related protein + Term 3014 - 3059 10.9 - Term 3002 - 3045 10.5 5 5 Tu 1 . - CDS 3057 - 3380 431 ## ACICU_02053 hypothetical protein - Prom 3414 - 3473 9.6 + Prom 3413 - 3472 8.9 6 6 Tu 1 . + CDS 3624 - 4526 862 ## COG0583 Transcriptional regulator + Term 4537 - 4587 10.4 - Term 4523 - 4574 12.2 7 7 Tu 1 . - CDS 4579 - 5373 915 ## COG0024 Methionine aminopeptidase + Prom 5647 - 5706 7.0 8 8 Tu 1 . + CDS 5726 - 7027 1348 ## COG1114 Branched-chain amino acid permeases + Term 7081 - 7124 5.3 + Prom 7104 - 7163 6.4 9 9 Tu 1 . + CDS 7219 - 7638 479 ## COG3193 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol + Prom 7681 - 7740 5.1 10 10 Tu 1 . + CDS 7898 - 8143 155 ## AOLE_08090 hypothetical protein + Term 8150 - 8191 5.1 11 11 Tu 1 . - CDS 8177 - 8641 385 ## ACICU_02059 hypothetical protein - Prom 8693 - 8752 3.9 + Prom 8517 - 8576 6.7 12 12 Tu 1 . + CDS 8770 - 9630 918 ## COG4757 Predicted alpha/beta hydrolase + Term 9649 - 9688 4.3 + Prom 9683 - 9742 6.2 13 13 Op 1 3/0.077 + CDS 9855 - 12713 3025 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 14 13 Op 2 19/0.000 + CDS 12728 - 13675 938 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 15 13 Op 3 . + CDS 13662 - 15380 1879 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 15382 - 15427 7.1 - Term 15369 - 15415 8.1 16 14 Op 1 . - CDS 15426 - 15596 142 ## ABBFA_001503 hypothetical protein 17 14 Op 2 . - CDS 15668 - 15931 79 ## ACICU_02065 hypothetical protein - Prom 15997 - 16056 8.9 + Prom 16467 - 16526 5.7 18 15 Tu 1 . + CDS 16563 - 17027 511 ## ABBFA_001502 transcriptional repressor MprA (protein EmrR) + Term 17065 - 17092 0.1 + Prom 17039 - 17098 8.0 19 16 Tu 1 . + CDS 17218 - 17433 184 ## ABBFA_001501 hypothetical protein + Term 17585 - 17640 2.3 + Prom 17853 - 17912 9.7 20 17 Op 1 . + CDS 18050 - 20134 1656 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Prom 20139 - 20198 4.6 21 17 Op 2 . + CDS 20260 - 20703 667 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 20717 - 20769 7.3 - Term 20714 - 20743 2.1 22 18 Tu 1 . - CDS 20758 - 22200 1528 ## COG2133 Glucose/sorbosone dehydrogenases - Prom 22444 - 22503 7.2 + Prom 22356 - 22415 10.7 23 19 Tu 1 . + CDS 22555 - 23193 400 ## ABBFA_001497 ACR protein + Term 23350 - 23409 11.0 + Prom 23201 - 23260 4.3 24 20 Tu 1 . + CDS 23431 - 24885 1337 ## COG0659 Sulfate permease and related transporters (MFS superfamily) + Term 24891 - 24917 -1.0 - Term 24870 - 24914 2.0 25 21 Tu 1 . - CDS 24933 - 26111 1136 ## COG1404 Subtilisin-like serine proteases - Prom 26306 - 26365 10.0 - Term 27061 - 27104 -0.9 26 22 Op 1 . - CDS 27340 - 28086 303 ## COG0657 Esterase/lipase 27 22 Op 2 1/0.077 - CDS 28094 - 29500 1302 ## COG1113 Gamma-aminobutyrate permease and related permeases 28 22 Op 3 . - CDS 29541 - 30791 1454 ## COG3844 Kynureninase - Prom 30892 - 30951 9.1 + Prom 30687 - 30746 6.4 29 23 Op 1 2/0.077 + CDS 30938 - 31387 342 ## COG1522 Transcriptional regulators 30 23 Op 2 . + CDS 31432 - 31968 944 ## PROTEIN SUPPORTED gi|184158399|ref|YP_001846738.1| acetyltransferase - Term 31900 - 31930 1.3 31 24 Tu 1 . - CDS 32020 - 32313 289 ## ABBFA_001489 hypothetical protein - Prom 32340 - 32399 6.8 32 25 Op 1 . - CDS 32428 - 32664 140 ## ACICU_02081 hypothetical protein - Prom 32702 - 32761 7.2 33 25 Op 2 . - CDS 32763 - 33122 198 ## ACICU_02082 putative prophage protein - Prom 33151 - 33210 7.5 + Prom 33092 - 33151 6.4 34 26 Op 1 4/0.077 + CDS 33294 - 33980 488 ## COG1011 Predicted hydrolase (HAD superfamily) 35 26 Op 2 . + CDS 33964 - 34404 499 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 36 27 Op 1 14/0.000 + CDS 34550 - 35599 1278 ## COG0468 RecA/RadA recombinase + Term 35619 - 35644 -0.5 37 27 Op 2 . + CDS 35653 - 36135 576 ## COG2137 Uncharacterized protein conserved in bacteria + Prom 36479 - 36538 5.2 38 28 Tu 1 . + CDS 36563 - 37447 904 ## COG1729 Uncharacterized protein conserved in bacteria + Term 37454 - 37503 13.5 - Term 37449 - 37482 3.1 39 29 Op 1 25/0.000 - CDS 37501 - 38289 622 ## COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 40 29 Op 2 18/0.000 - CDS 38286 - 38771 548 ## COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 41 29 Op 3 . - CDS 38778 - 39848 837 ## COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 42 29 Op 4 . - CDS 39853 - 40356 512 ## ABBFA_001478 chaperone protein skp precursor (cationic 19 kDa outer membraneprotein) 43 29 Op 5 18/0.000 - CDS 40398 - 42902 2938 ## COG4775 Outer membrane protein/protective antigen OMA87 44 29 Op 6 17/0.000 - CDS 42961 - 44316 1418 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 45 29 Op 7 15/0.000 - CDS 44318 - 45514 970 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 46 29 Op 8 32/0.000 - CDS 45515 - 46339 774 ## COG0575 CDP-diglyceride synthetase 47 29 Op 9 19/0.000 - CDS 46339 - 47091 684 ## COG0020 Undecaprenyl pyrophosphate synthase 48 29 Op 10 33/0.000 - CDS 47097 - 47651 843 ## COG0233 Ribosome recycling factor - Prom 47676 - 47735 7.6 49 29 Op 11 . - CDS 47737 - 48465 903 ## COG0528 Uridylate kinase 50 29 Op 12 . - CDS 48517 - 49860 718 ## PROTEIN SUPPORTED gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase + Prom 50037 - 50096 5.7 51 30 Op 1 14/0.000 + CDS 50202 - 51311 1053 ## COG3852 Signal transduction histidine kinase, nitrogen specific 52 30 Op 2 . + CDS 51298 - 52791 1411 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains + Prom 52885 - 52944 4.9 53 31 Tu 1 . + CDS 53067 - 53720 414 ## COG1309 Transcriptional regulator + Prom 53753 - 53812 3.7 54 32 Tu 1 . + CDS 53833 - 54753 936 ## COG0078 Ornithine carbamoyltransferase + Term 54762 - 54809 6.2 + Prom 54778 - 54837 9.8 55 33 Tu 1 . + CDS 54947 - 55471 468 ## ABBFA_001465 hypothetical protein + Term 55512 - 55561 1.1 56 34 Tu 1 . - CDS 55468 - 55950 690 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase - Prom 56044 - 56103 5.8 + Prom 55920 - 55979 5.0 57 35 Tu 1 . + CDS 56054 - 56698 379 ## ABBFA_001463 hypothetical protein + Term 56717 - 56750 2.1 - Term 56700 - 56741 8.1 58 36 Tu 1 . - CDS 56745 - 57989 1015 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 58009 - 58068 3.1 - Term 58281 - 58341 1.0 59 37 Tu 1 . - CDS 58400 - 58891 501 ## ABBFA_001461 hypothetical protein - Prom 59109 - 59168 9.0 60 38 Tu 1 . + CDS 59203 - 59664 337 ## ABBFA_001460 hypothetical protein + Term 59676 - 59723 3.2 + Prom 59709 - 59768 6.2 61 39 Tu 1 . + CDS 59846 - 60142 334 ## ABBFA_001459 hypothetical protein + Term 60363 - 60406 -0.4 62 40 Tu 1 . - CDS 60276 - 61670 1798 ## COG0114 Fumarase - Prom 61723 - 61782 4.1 63 41 Tu 1 . - CDS 61785 - 62792 1210 ## COG1087 UDP-glucose 4-epimerase - Prom 62958 - 63017 1.8 + Prom 62737 - 62796 5.0 64 42 Op 1 . + CDS 62858 - 63226 206 ## COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction 65 42 Op 2 . + CDS 63271 - 63621 288 ## ABBFA_001455 hypothetical protein 66 42 Op 3 . + CDS 63639 - 63923 241 ## ABAYE1559 hypothetical protein 67 42 Op 4 . + CDS 63943 - 64254 373 ## COG2920 Dissimilatory sulfite reductase (desulfoviridin), gamma subunit + Term 64399 - 64436 -1.0 68 43 Tu 1 . - CDS 64259 - 65122 767 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 65186 - 65245 7.2 + Prom 65142 - 65201 2.9 69 44 Tu 1 . + CDS 65245 - 66648 1174 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Term 66588 - 66629 9.0 70 45 Tu 1 . - CDS 66645 - 67127 653 ## COG1733 Predicted transcriptional regulators - Prom 67249 - 67308 8.0 - Term 67273 - 67321 7.4 71 46 Op 1 5/0.077 - CDS 67336 - 68571 1131 ## COG0303 Molybdopterin biosynthesis enzyme 72 46 Op 2 1/0.077 - CDS 68571 - 69494 1046 ## COG0315 Molybdenum cofactor biosynthesis enzyme 73 46 Op 3 . - CDS 69518 - 70003 534 ## COG0314 Molybdopterin converting factor, large subunit 74 46 Op 4 . - CDS 70007 - 70261 174 ## A1S_1998 hypothetical protein 75 46 Op 5 . - CDS 70262 - 71176 776 ## COG2896 Molybdenum cofactor biosynthesis enzyme - Prom 71415 - 71474 4.4 76 47 Tu 1 . - CDS 71528 - 73801 1679 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 73886 - 73945 6.0 - Term 73853 - 73899 2.2 77 48 Tu 1 . - CDS 73951 - 74331 182 ## ABAYE1547 molybdopterin-guanine dinucleotide synthase - Prom 74438 - 74497 4.0 - Term 74501 - 74549 1.1 78 49 Op 1 2/0.077 - CDS 74577 - 77357 2487 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing 79 49 Op 2 . - CDS 77376 - 78998 1848 ## COG1251 NAD(P)H-nitrite reductase 80 49 Op 3 . - CDS 79011 - 81557 2785 ## COG1251 NAD(P)H-nitrite reductase 81 49 Op 4 . - CDS 81569 - 81910 174 ## ABAYE1543 hypothetical protein - Prom 81985 - 82044 10.8 82 50 Op 1 4/0.077 + CDS 82295 - 82885 491 ## COG3707 Response regulator with putative antiterminator output domain 83 50 Op 2 . + CDS 82886 - 83896 810 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components - Term 83726 - 83774 -0.2 84 51 Tu 1 . - CDS 83822 - 84013 79 ## - Prom 84171 - 84230 7.3 + Prom 84009 - 84068 5.6 85 52 Tu 1 . + CDS 84230 - 85558 1105 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Term 85740 - 85773 1.1 + Prom 85601 - 85660 6.5 86 53 Op 1 9/0.000 + CDS 85794 - 86249 495 ## COG0757 3-dehydroquinate dehydratase II 87 53 Op 2 27/0.000 + CDS 86267 - 86686 722 ## COG0511 Biotin carboxyl carrier protein 88 53 Op 3 . + CDS 86703 - 88073 1668 ## COG0439 Biotin carboxylase + Term 88085 - 88128 10.5 - Term 88080 - 88109 1.4 89 54 Tu 1 . - CDS 88128 - 88607 470 ## ACICU_02138 hypothetical protein - Prom 88692 - 88751 3.9 - Term 88651 - 88691 1.2 90 55 Tu 1 . - CDS 88779 - 89870 647 ## COG0477 Permeases of the major facilitator superfamily - Prom 90065 - 90124 4.3 Predicted protein(s) >gi|333032579|gb|GL891847.1| GENE 1 185 - 610 221 141 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02049 NR:ns ## KEGG: ACICU_02049 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 141 1 141 141 274 100.0 9e-73 MCFSYNKQDKLKTFKFKMNSLSNLQPVSKDLMIKIYILRTMMYCGVLWGLFDEGWAIKSD QEDFIFPFWLNGVQAHRYAKTHWPNYKPRKITPKDFHESLLPTLTRLKVTPALFNSSHRK LKLSTQQMHHFFFNHPKWQVA >gi|333032579|gb|GL891847.1| GENE 2 751 - 1182 567 143 aa, chain + ## HITS:1 COG:PA0250 KEGG:ns NR:ns ## COG: PA0250 COG0517 # Protein_GI_number: 15595447 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Pseudomonas aeruginosa # 1 143 1 143 144 140 52.0 6e-34 MTIVAQVIKNKSEQAIFTISPEATVLEAITIMAEKGIGALVVAEGEQVVGILSERDYTRK VTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLDNGKLVGFISIG DLVKAAMEDQKVLIEQLKQYISG >gi|333032579|gb|GL891847.1| GENE 3 1233 - 2441 1450 402 aa, chain - ## HITS:1 COG:aq_023 KEGG:ns NR:ns ## COG: aq_023 COG4992 # Protein_GI_number: 15605627 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Aquifex aeolicus # 15 388 2 366 376 315 44.0 7e-86 MTDITLAPVQPDQPTHLMATYGRQAISFVRGRGAYLYTQDGTEYLDALTGIAVCGLGHSH PAIAEAIAEQAATLVHTSNLFEIPWQTAAAQKLAEVSGMEEIFFSNSGAESNEGAIKIAR KFGTQQGISLPKIIVAEQSFHGRTLATLSATGNKKVQDGFAPLVEGFIRVPFGDIEAIQE AALQHPDIVAILIEPIQGEGGINTAPQGFSYLEEVRQICNQHNWLMMLDEIQTGNGRTGK YFAYQHTNIIPDVLTTAKGLGNGFPVGAVMTQGKAVGLLGPGSHGSTYGGTVLGSRVVYT VIDTIQKENAVENAAVVGNYIVDQLRAQLSDKNVQVRGFGMMIGIQLPKDCAELVAIARD EYKLIINVTAGSVVLLLPPINMTQAQADILLERLVALITNYL >gi|333032579|gb|GL891847.1| GENE 4 2669 - 3010 521 113 aa, chain + ## HITS:1 COG:STM1433 KEGG:ns NR:ns ## COG: STM1433 COG0278 # Protein_GI_number: 16764781 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin-related protein # Organism: Salmonella typhimurium LT2 # 12 109 8 105 115 142 67.0 2e-34 MTEQARDTEALIRDQIAKHPVLLYMKGTPQFPQCGFSARAVEALSQIGRPFAYVNILENP DIRATLPKIANWPTFPQLWVNGELIGGSDIMLEMFQNGELKPLIEQYSAAPEA >gi|333032579|gb|GL891847.1| GENE 5 3057 - 3380 431 107 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02053 NR:ns ## KEGG: ACICU_02053 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 107 1 107 107 214 100.0 8e-55 MSYQLVELENATANIICPICKLAVIDWTQEQYVQPCEHTVFIAMDLGFEFVADRFEEVMN QNVDELHEDPNINIFDAITTTPYKNLTILKADLGVDGLFRYVGISDC >gi|333032579|gb|GL891847.1| GENE 6 3624 - 4526 862 300 aa, chain + ## HITS:1 COG:YPO2150 KEGG:ns NR:ns ## COG: YPO2150 COG0583 # Protein_GI_number: 16122383 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 2 298 1 297 301 228 43.0 8e-60 MLTDLDDFYCFALVVEHGGFSAAERVTDIPKSKLSRRVYNLEENLGVRLIQRSSRHFAVT DIGMDIYRHAQVMMNAAQAAHDLVDHLSIQPRGVVKVSVPVDIAQNQLPKILPAFLKKYP EIRLQLIVSNRRVDVINEGIDIALRVRSKLDDDPSLVLRQFALIEQSLFASQAYLNEFGN IKSPDELSDHRILSLSEEHLDQQFILHGPDNQLKKVKVSPTIMGTNIYMLAQLASQNCGI ALLPDTAAEDFVKSGQLVQILPDWKAAHGIFHAVYPSRRGLLPAVRVFIDYLVEHLSEHP >gi|333032579|gb|GL891847.1| GENE 7 4579 - 5373 915 264 aa, chain - ## HITS:1 COG:XF0111 KEGG:ns NR:ns ## COG: XF0111 COG0024 # Protein_GI_number: 15836716 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Xylella fastidiosa 9a5c # 6 260 4 258 259 352 65.0 3e-97 MRASTVTIKTEQDLEKLRVSGRLAAQVLEMIGEYVKPGVTTEYLDNICNDYIVNTLKVIP ANVGYHGFTKTICTSVNEVVCHGIPSQNKILKDGDIINIDVAIIKDGYFGDTSRMYYVGN VNPHAKKLVETTYEAMVAGIHAVKPGATLGDIGYAIQSVAHREGYSIVREYCGHGIGKVY HEQPNILHYGQRGQGLVLKKGMVFTIEPMVNAGKPQVKELNDGWTVITQDHSLSAQWEHM VAVTDTGFELLTPWPEGVGNYPEI >gi|333032579|gb|GL891847.1| GENE 8 5726 - 7027 1348 433 aa, chain + ## HITS:1 COG:PA1971 KEGG:ns NR:ns ## COG: PA1971 COG1114 # Protein_GI_number: 15597167 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Pseudomonas aeruginosa # 1 428 1 428 437 464 61.0 1e-130 MQQLRTGDIIALGFMTFALFIGAGNIIFPPIVAQQAGDHVWLAAIGFLITAVGLPVITIM ALSRMQGSIEIISSPLGRIASLILTVVCYLSVGPLFATPRTATVSYEIGFSSYFGTSSSS LLIYSAIYFAFVTVVSLYPNKLLDTVGHVLAPLKIIALAILGIAAVMIPAGYVPAPINHY VNSPVSEGFVNGYLTMDTLGALVFGIVIIQAIYSRGVTDNKLVTKYAIIASLISGVGLTL VYLSLFKLGLGSHEVAPNAANGAVILHAYVQHAFGNMGSLFLTGLIFLACMVTAIGLTCA CAEYFAQLTKLPYKLLVFILVGFSFIISNLGLTKLIAVSVPVLSAIYPPAIVVIMLSFFW KFWHKPSFIVGSVTSIALIFGIIDGLKVAGFGDYLPNFLQHLPLNEQNLAWLIPSLVVLV VTTLIDKVKHKSI >gi|333032579|gb|GL891847.1| GENE 9 7219 - 7638 479 139 aa, chain + ## HITS:1 COG:RSc1967 KEGG:ns NR:ns ## COG: RSc1967 COG3193 # Protein_GI_number: 17546686 # Func_class: R General function prediction only # Function: Uncharacterized protein, possibly involved in utilization of glycolate and propanediol # Organism: Ralstonia solanacearum # 1 130 1 130 137 112 43.0 3e-25 MKSKYYLTLADAEFLMEEAQKYAIEHNFKVSIAIVDETSSLLLMKRLDGASPLTTHLCLE KAKCSSMSGRPSKFYEELLQNGRLGFLSMPSAKGMLEGGKAIIYEGQILGAIGVSGVQSF EDAEIAQHAIDVFLKKQSS >gi|333032579|gb|GL891847.1| GENE 10 7898 - 8143 155 81 aa, chain + ## HITS:1 COG:no KEGG:AOLE_08090 NR:ns ## KEGG: AOLE_08090 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 80 1 80 84 138 96.0 6e-32 MLSLHFNKQVFINTLNSKDSVVYGVTTLALMLTLLFQGMIKGNLKPEYFMYAMVVSFVFC VWAFVDHKMRKLAKRRLSQQK >gi|333032579|gb|GL891847.1| GENE 11 8177 - 8641 385 154 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02059 NR:ns ## KEGG: ACICU_02059 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 154 1 154 154 247 100.0 9e-65 MEIMDLSKAVQLAIVFSGVFLWIGMLTGVWKYWQIRRSELSRAHYYVDIAHRSSLLYAAA TLILAVLSYFTILNEDIALWCVLANILFFSFSILVYIIHGFLQDTTNQFKQPHRLGHFSL PAWLMTFMMFALIITELLATAILVMGTILLFLSK >gi|333032579|gb|GL891847.1| GENE 12 8770 - 9630 918 286 aa, chain + ## HITS:1 COG:RSp0795 KEGG:ns NR:ns ## COG: RSp0795 COG4757 # Protein_GI_number: 17549016 # Func_class: R General function prediction only # Function: Predicted alpha/beta hydrolase # Organism: Ralstonia solanacearum # 10 277 10 273 290 143 32.0 3e-34 MDKTFESFWITCKDGYQLAAQFYPAQEKKAEYPILICPATGITKNFYHSFATWLSQQGYD VLSFDFRGIGESLHGALKQSTASITDWGTLDIPAAIDALLIKTKANQVILIGHSAGGQLL GVVPNYNKVAKVITVAGSTGHIKGLKGKTKVLAPVMFNLIFPISSIVKGYGATQFIGMGE NLPKKVAQQWREFYSRPGYVKNAIGKTIFHDFHSDIQCPITAIWADDDEIATKRNVQELL SLYPNANKKMIELSPKDLGYKSIGHMLLFKKSHQKLWSILEQEIKH >gi|333032579|gb|GL891847.1| GENE 13 9855 - 12713 3025 952 aa, chain + ## HITS:1 COG:PA3562_3 KEGG:ns NR:ns ## COG: PA3562_3 COG1080 # Protein_GI_number: 15598758 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Pseudomonas aeruginosa # 402 952 3 553 554 590 58.0 1e-168 MLALEPQHIHMNQHAVDKTHALKCLVDILEKDGLVTPEYITGLINREQQSATYLGQGIAI PHGTPQSREYILKTGIRLAHFPEGVIWDGENKIYLAVVIAAKSDEHLQVLQILTRALMHD VSEQVKNASKPEQIIELLQAQPLSLALHENLIQTEIDAQDIEDLFWAASQTLKKHNFVKC GFLSSLDPEQAIQLQDQIWSISSDHFVQQPAISITKPSQALELNGKKLNTLVCIAANDQL DNERFNRLIDILFNPEQVAELDKTQTPNEIAKIIGADVVPDWPQRSVVLANAHGLHARPA THLVNLTKTFQGDIQVAVDDGSFVSAKSLTRLLALGCKRGQTLRFIAEPETDAVEALDQV ILAVQQGLGEEVEALPVTSETPDQLPAQTVISNATTLGNNTGIAASSGLAFGPVHVIKPK VYQYERMGSGVKVEKENLDIALHAVKNNIHQVIAKADASEIKQIFRAHLEMLDDPDLING VYQKIYQNLSAPAAWHEHIEAAAKAQEALPDRLLAERATDLRDIGDRVLTQLCGEVVIEE PKEPYILIMHDVGPSDVARLNKDRVAGILTAIGGASAHSAIVARALGIPAIVGAGEQVLE IDPKSTLLINGDTGTFVLDPDVAQIEQAKQEREQQRQIREEAERHSHEPAITLDQHQIEI AANLGKVQATAQAVECGAEAIGLLRTELVFMSHSSAPNEAVQEADYRVVLDALAGRPLVV RTLDVGGDKPLPYLPIAEEENPFLGLRGIRLTLRRPELLKQQLTALLKASDNRPLRIMFP MIGRVEEWRAAKAILDEVRAQHPCGNLQVGIMIEVPSAALLAPVLAQEVDFFSIGTNDLT QYTLAIDRGHPILSAEADGLHPSILNLIDQTVKAAHKHGKWVGICGELAADPKAVPILMG LGVDELSMSPNSIPLVKAQIRTLSYSHAQKLAQQALLCDSAPAVRQLSEQDL >gi|333032579|gb|GL891847.1| GENE 14 12728 - 13675 938 315 aa, chain + ## HITS:1 COG:PA3561 KEGG:ns NR:ns ## COG: PA3561 COG1105 # Protein_GI_number: 15598757 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Pseudomonas aeruginosa # 1 310 1 312 314 257 46.0 3e-68 MAKILTITLNPAIDVTIQLDELLVGEVNRQESVEIHAAGKGLNVAQVLKDLGHDVIVTGF LGEHNRQIFDTHFAQAQFQPEFIYIDGETRQNIKIAEHSGRMTDLNGKGFFVSETDKQRL FNKIEALLPQVEVVAIAGSLPQGFSIDELQQLIQLIKKNNKKVALDTSGKALVAAIECQP WMIKPNTDELVESYQRPATSYAEQRELFDSLTNIEHVVISMGEDGVNWLHATHPLHAQAP KVIVKSTVGAGDSLLAGMIHGLVNQLPPEETLKTATAIASHAVTQIGFRIPTSEVLNQLK AQTIINSLSESDANC >gi|333032579|gb|GL891847.1| GENE 15 13662 - 15380 1879 572 aa, chain + ## HITS:1 COG:VCA0516_2 KEGG:ns NR:ns ## COG: VCA0516_2 COG1299 # Protein_GI_number: 15601276 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Vibrio cholerae # 233 567 1 336 340 413 66.0 1e-115 MQTAKHLLFVTNGPQQQVNALILARKLALVATQHGYKHSVISLDEFESSDHFDHVIIIGQ QPKNLNIFGQNALSLVSIEDIKDDADKALLTALEHSKPANEWEQKPKQASNTATHFVAIT ACPTGVAHTFMAAEALQQGAERLGYQIDVETQGSVGAKNILSPQAIADADIVILATDIEV NTDRFIGKRVYRCSTGFALKQTDKAFAEAIANAQVLEQGKQQATTENKDKTEKVGVYKHL LTGVSYMLPMVVAGGLLIALSLCFGLNAAEQAGSLPAILKQIGAAAFTLMVPMLSGYIAY SIADRPGLAPGLIGGLLAAQLQAGFLGGIVSGFLAGYIALFIAKKVKLPTSLESLKPILI IPLLGTLSVGLIMFYVVGQPVAHIFELMKDFLNNMGTTNAVLMGIILASMMCIDLGGPIN KAAYAFTVGLLTTNTYMPMAATMAGGMVPAIGMAIATFLARNKFSTGEKDAGKAAFVLGL CFISEGAIPFAAKDPMRVIPTCILGGTVTGALVALFHCELVTPHGGVFVLLIPNAINHAW LYLAAIAAGSIVTGVSYAIIKKNQEEKLLTNS >gi|333032579|gb|GL891847.1| GENE 16 15426 - 15596 142 56 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001503 NR:ns ## KEGG: ABBFA_001503 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 56 113 168 168 101 96.0 1e-20 MDPATGAMYKLAPKDINTVLEAQNLVGEAKQKPTLTVMLAQDIPEQMMARAVQINK >gi|333032579|gb|GL891847.1| GENE 17 15668 - 15931 79 87 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02065 NR:ns ## KEGG: ACICU_02065 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 87 1 87 87 124 100.0 1e-27 MKKLLITSMVALTIGLNGCASIITGSSQTLTFTSVPESATIEIKNRNGVKVHTGQTPATV SLKKVPVISNQKVIKYLSVNLVIKLKR >gi|333032579|gb|GL891847.1| GENE 18 16563 - 17027 511 154 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001502 NR:ns ## KEGG: ABBFA_001502 # Name: not_defined # Def: transcriptional repressor MprA (protein EmrR) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 143 1 143 154 263 100.0 1e-69 MTKKYARFLPTTESFTLEDFPYYWITQVHAQYVQNIDNALKKYGLDNSRRRIMLALSSKP HASVSELSDMIISKMSTTTKIVYRLKDEGLVETYSCQSDGRITRVYLTERGTEMINKIND LTSVVLEQSFEGITPLQLEKMMESLKLLLKNLSR >gi|333032579|gb|GL891847.1| GENE 19 17218 - 17433 184 71 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001501 NR:ns ## KEGG: ABBFA_001501 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 71 1 71 71 109 100.0 5e-23 MAKRKYKSDKFQVRRINRQWWVLEKDLETNCYSKHEQVATKTLANNYADDYIEQYYMNLY IQQQLKKPETV >gi|333032579|gb|GL891847.1| GENE 20 18050 - 20134 1656 694 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 215 667 301 746 776 226 33.0 9e-59 MSNTTQKHFIVEQFPLPTWVSDEKGLILYCNTECTKYWRDTSPPLFQQWLDFVYPADLEE VKNKWLDAIRFRSRIEFKCRLLHKTHYYRWCKISIQLSKYHESSQENEWFISFLDIDQDI QEQQSLRKDIDIQNQMLDISVDCIKVLNTDGTVSHMNKSGCLALGIPVDEKKFGMRWLDL LPPHIRKRGRIALKKALQGKVARFAGMSCLPNQDPEYWDNMLTPIQHTNGEIIQILCVSR NVTQQYLTENRLRDISERDELTGLFNRRSFKLQLKRTLAYSRETQTSVGLLLIDLDHFKH INDTIGHSAGDHLLKILSKRFNQCVDPERCSVARLGGDEFAVIVSHLENENDVRELAEVL LQQLNQPITYAGNVLNGGMSIGCAIYPQDAVDQSSLLSCADMALHDLKARGRGGIRMYNP SMMQLTEAIASQLNIARQLIRHHTIQPYYQPKVDLKTHAVVGFEALLRWHTTSAQRGLPS QIAEAFKDYDLASKIGEIMQQQVLHDIAKWIKLGFVPLPVSLNAAPVEFLRDNYAERLLK KINQLEIPTHLIEIEVTEHMLGDRGSEYVIRALNKLKQHGVRIALDDFGTGFSSLTHIRD YPIDCLKVDCSFIQKMQHDPSIYAIVQAIGLLAPNLSLGLIAEGIETPEQEELLLQFGYN IGQGFLFESAIDANQVISILKQGQAYLESHYSMN >gi|333032579|gb|GL891847.1| GENE 21 20260 - 20703 667 147 aa, chain + ## HITS:1 COG:MJ0531 KEGG:ns NR:ns ## COG: MJ0531 COG0589 # Protein_GI_number: 15668711 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Methanococcus jannaschii # 3 147 26 166 170 85 33.0 2e-17 MSYHHILVPVDGSPTSLIAVNHAASLAKAFSSKVTLVYALTIDPFISVEIIDSTEIAQDY FNKARASIQSILDQAKEQFSQHGISVETKIVEGQTIHTEIIKAATELKADLLVIGSHGRK GFKKFFLGSVTQALLGEIHVPVLVVTE >gi|333032579|gb|GL891847.1| GENE 22 20758 - 22200 1528 480 aa, chain - ## HITS:1 COG:PAE2689 KEGG:ns NR:ns ## COG: PAE2689 COG2133 # Protein_GI_number: 18313519 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Pyrobaculum aerophilum # 25 295 17 257 371 122 30.0 2e-27 MNKHLLAKITLLGAAQLFTFHTAFADIPLTPAQFAKAKTENFDKKVILSNLNKPHALLWG PDNQIWLTERATGKILRVNPESGSAKTVFQVPEIVSDADGQNGLLGFAFHPDFKHNPYIY ISGTFKNPKSTDKELPNQTIIRRYTYNKTTDTFEKPIDLIAGLPSSKDHQSGRLVIGPDQ KIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNSKDYHTYMGKVLRLNLDGSIPKDNPSF NGVVSHIYTLGHRNPQGLAFAPNGKLLQSEQGPNSDDEINLVLKGGNYGWPNVAGYKDDS GYAYANYSAATNKSQIKDLAQNGIKVATGVPVTKESEWTGKNFVPPLKTLYTVQDTYNYN DPTCGEMAYICWPTVAPSSAYVYTGGKKAIPGWENTLLVPSLKRGVIFRIKLDPTYSTTL DDAIPMFKSNNRYRDVIASPEGNTLYVLTDTAGNVQKDDGSVTHNLENPGSLIKFTYNGK >gi|333032579|gb|GL891847.1| GENE 23 22555 - 23193 400 212 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001497 NR:ns ## KEGG: ABBFA_001497 # Name: not_defined # Def: ACR protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 212 1 212 212 423 99.0 1e-117 MCANFKPLKKEHSYQLDLLEPTFDYKSDVYPSDDCPIILSHQNEWEWRKVKFGMLPPYAK EVSFKYATYNARTETVDHKRSFKHAWSNDQFGLVPVEAIYEPKYINGKAHWYGIFRQDGK PFTLAAIYEETIIDEQKVRTMSLLTINADRHSFMKQFHKPDDEKRSIIVIPDHLRNDWLN CKHTDAPDFFLDMPLNEFTSLPKAEMNKSKNS >gi|333032579|gb|GL891847.1| GENE 24 23431 - 24885 1337 484 aa, chain + ## HITS:1 COG:PA2563 KEGG:ns NR:ns ## COG: PA2563 COG0659 # Protein_GI_number: 15597759 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Pseudomonas aeruginosa # 1 483 1 485 495 610 65.0 1e-174 MLTNLREQWFSNVRADILSGLVVGLALIPEAIAFSIIAGVDPQIGLYASFCIAVIISFVG GRPAMISAATGAMALVMTTLVKEHGLQYLFAATILTGVIQIIVGYLKLAKLMRFVSKSVV IGFVNALAILIFMAQLPELVNVSWYVYLLVAIGLAIIYLFPYVPKLGKIFPSPLICIVII TLLAFFLGLDVRTVGDMGALPNTLPIFLIPDIPLNLDTLLIILPYSLALAAVGLLESMMT ATIVDEMTDSPSNKFKECKGQGIANIASGFMGGMAGCAMIGQSMINVKSGGRTRLSTLCA GIFLLILVVFLSDWLKVIPMAALVAVMIMVSISTFEWRSLTQFKTNPKSSNTVMIATVVV VVATHNLALGVLTGVLLSALFLANKLENDIQVISSLEGNARLYDLRGQIFFSSSDRFMQS FNFKEEVKEVIIDLTHSHIWDVTSVAMLDSAVEKFQKNGIQVTVRGLNEASSIMIDKYGT HAKI >gi|333032579|gb|GL891847.1| GENE 25 24933 - 26111 1136 392 aa, chain - ## HITS:1 COG:VC0157 KEGG:ns NR:ns ## COG: VC0157 COG1404 # Protein_GI_number: 15640187 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Vibrio cholerae # 28 389 39 411 535 291 44.0 1e-78 MNIRQVSAICLSIAATHFVYAASNVANPVNDSSQTKGIIKNQYIVILNKDAGPSKDFAQN IAKQHAGKVLQSYDTVLKGFAIYLPDTAGTAFIEAMKKNPQVLSVESDTIVNIDATTQSN PDWGLDRIDQKALPLNSAYSYLQTGSGTTAYIVDTGILSSHQEFSGRVLSGYTAISDGNG TTDCNGHGTHVAGTVGGTTYGVAKNVNLVPIRILGCDGSGASSNVIAGLDWILKNGKKPA VVNMSLGGATSSSLDSAVENLYNNGYVMVVAAGNSNTDACTSSPARVSKAITVAATDNTD TRASYSNYGSCVDIFAPGSQINSSWIGSNTATKILNGTSMATPHVAGVVAEMLQSTPTAS PQTISTNLLNQASSNVVKNPSGSPNRLLYKSP >gi|333032579|gb|GL891847.1| GENE 26 27340 - 28086 303 248 aa, chain - ## HITS:1 COG:DRA0340 KEGG:ns NR:ns ## COG: DRA0340 COG0657 # Protein_GI_number: 15807999 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 35 215 52 240 276 122 36.0 8e-28 MRKYDNATTVENEGEILAGFQYRSLLSYQAYYHIKDIKYGSKNRSTLDFFPLEHVSKTVI FIHGGYWQWCDKSDFAFIAPYILAKGAQCVLLEYDLAPQSHISQIVAQTQQALDFIAKQN WKIGEVVVVGHSAGAHLGALCLNHPLLSKATLLSGIYDLLPIQETHLNHALNLSQEDILK YSPIHQQEQINIPCTILCGGLELSELKWQSQNYFEYRLSQGEDMISFEIIPEINHYSILE HYFKFIFK >gi|333032579|gb|GL891847.1| GENE 27 28094 - 29500 1302 468 aa, chain - ## HITS:1 COG:PA2079 KEGG:ns NR:ns ## COG: PA2079 COG1113 # Protein_GI_number: 15597275 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Pseudomonas aeruginosa # 4 449 7 450 468 452 57.0 1e-127 MSSFDEIQNREAGLHKKLSAKQMGMIAIGGAIGTGLFMGSKFAISFAGPAVIVSYAIGGL IAFALMACLAEMTVQHPTSGSFGAYAEHYISPLAGFLVRYCYWACIVLAVGTEITAVADY MKLWFPNVGSWVWIGFFSLTLLVVNAYSVKAFGLVEYWFSTIKVFAIIVFILLSIGILTQ SNQGMTQVVTHLSGHGGFFPNGFSGVWIGVIISIFSYLSIEMIAVAAGEAKDPEKAVKKA FKSTALRLILFYLLSLFLIVTLVPWTVLIGADATSPFVMVMKIVGIPYADSILNFIVIVA ALSAMNSMLYISTRMLFSLSRAGDAPKVFGRISSNGVPVNALLLSAVGIGIASIVYTINP ASAFPIMIALSMFGALFTWGSIFVTHMFFRRHMVQQNIQLKFKIPASRFISLFGFIAILS ITVTTWFTSEFKSTLQFGVPLVLVLIFFYYLKRSTVKLNLNSSEETLK >gi|333032579|gb|GL891847.1| GENE 28 29541 - 30791 1454 416 aa, chain - ## HITS:1 COG:PA2080 KEGG:ns NR:ns ## COG: PA2080 COG3844 # Protein_GI_number: 15597276 # Func_class: E Amino acid transport and metabolism # Function: Kynureninase # Organism: Pseudomonas aeruginosa # 1 416 1 416 416 535 56.0 1e-151 MITREQCLYWDQEDELKKFKDEFALPEGVIYLDGNSLGARPKKSLAVAQHIISQEWGEDL INSWNKADWWGLPTRLGDKVAKLIGAEQGEVVISDSTTLNLFKVLSAAVKIQADKFPEHK IIVAEKDAFPTDIYIIEGFIDLIQKGYQVELIDGVEDLSRALEKDVAVVVLSHVNYRTGY FYDMATINEQIHSKDALVIWDLCHSVGAVPMHLNQTDSDFAIGCTYKYLNGGPGSPALLW VNEKHRDQFWQPLSGWWSHKKPFDMAQHYEPANSIRRYLCGTQPVISMSLIECGVDIFLH ADMQKIREKSLKLTDLFIQLVHQECSEFGFELITPLDHNHRGSHVSYRHEFGYEIIQALI ARGVIGDYREPAVLRFGITPLYLGFEDIWNAVQHLKETMLNSEWKNKQYLVRGEVT >gi|333032579|gb|GL891847.1| GENE 29 30938 - 31387 342 149 aa, chain + ## HITS:1 COG:PA2082 KEGG:ns NR:ns ## COG: PA2082 COG1522 # Protein_GI_number: 15597278 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 144 1 144 158 144 46.0 6e-35 MNVDAIDLKILKYLQDNARLSNQELADLVNLSASACHRRVKILETNGIIEKYQAKVNYEK LGIKIEAIVEIKLAQLTENDHNFFLSQIKNFDEVINAYIITGESNYVLHVATKDLNSFSH FVINTLNKIKGVVSINSKIILQKIIQKPL >gi|333032579|gb|GL891847.1| GENE 30 31432 - 31968 944 178 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|184158399|ref|YP_001846738.1| acetyltransferase [Acinetobacter baumannii ACICU] # 1 178 1 178 178 368 100 1e-101 MIETERLILRQWKESDSEPFIKMGLDEDVMRFFPKLLPATESISLIQRISALIDENGWGF WAVELKETQEFIGFIGLHNQPEQFDFSPCIEIGWRIATEHWKKGYATEGAKAALEYAFNI LNKDKVVSFTATVNKPSQAVMERLGMRKVKYFNHPKLPDEHALQKHVLYEIYHPKLEL >gi|333032579|gb|GL891847.1| GENE 31 32020 - 32313 289 97 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001489 NR:ns ## KEGG: ABBFA_001489 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 97 1 97 97 183 100.0 2e-45 MKIGFIGGANDGIVINAANGIDTYKLEWHYKAEKHCEEQPSLGLNGPEYDYYNLLILRKN KEAKLFYVLTTMDKEDIADKINEYWEYSTSVGYDFDE >gi|333032579|gb|GL891847.1| GENE 32 32428 - 32664 140 78 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02081 NR:ns ## KEGG: ACICU_02081 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 78 1 78 78 141 100.0 7e-33 MGLYTIRYGYRNNSFFIASNTAGQFIVIDALGADFQIGHQISYEGSKIINETLNDETDAK VHLESNEKEAYEYLRTMK >gi|333032579|gb|GL891847.1| GENE 33 32763 - 33122 198 119 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02082 NR:ns ## KEGG: ACICU_02082 # Name: not_defined # Def: putative prophage protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 119 1 119 119 205 100.0 6e-52 MKNSNFFVVFIGSICFTFSANTLAQNITAVFSPKRGVVCDKYICADKKGVSKSLTNQYLG AKKAKQAFSQGDFDTSAFTFSNGVFCDTTTKLCHVNKFFENGHRSRVDKKMTDKIFKNR >gi|333032579|gb|GL891847.1| GENE 34 33294 - 33980 488 228 aa, chain + ## HITS:1 COG:PA5177 KEGG:ns NR:ns ## COG: PA5177 COG1011 # Protein_GI_number: 15600370 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Pseudomonas aeruginosa # 5 212 12 217 221 155 37.0 5e-38 MNKVVLFDMDGTLLDLAFDDFIWNECLPKRHSETHHLSLTESQEILNQFYRSHKHTLAWY SSNFWTQTTGVDVLKLQQEFQHKIKARSGCMELLSALKAQDYQCWLVTNADCASLKLKLD NVPIQDFFEVIVSSEQIGYAKEDIQFWKELQRLHHFAPESTIFLDDTLPVLKTAEKFGIR HLFTILQPSSLKSIRQPQDLEYKALDQLTELLSILNQIDRKDNDVKIA >gi|333032579|gb|GL891847.1| GENE 35 33964 - 34404 499 146 aa, chain + ## HITS:1 COG:PA5195 KEGG:ns NR:ns ## COG: PA5195 COG1188 # Protein_GI_number: 15600388 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Pseudomonas aeruginosa # 5 134 4 131 131 113 54.0 2e-25 MSKLREDDAVETMRVDKWLWAARFFKTRSIAKAAIEGGKVHHNNERVKVSKEIRVGMELV VQQGFDKKTVVVKALSNTRGPAPVAQQLYEETEVSIARRELIASQRKLHNLARPDHRPSK KDRRQINRFKQDNDQHYEDHWSYNDE >gi|333032579|gb|GL891847.1| GENE 36 34550 - 35599 1278 349 aa, chain + ## HITS:1 COG:PA3617 KEGG:ns NR:ns ## COG: PA3617 COG0468 # Protein_GI_number: 15598813 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Pseudomonas aeruginosa # 1 344 1 342 346 488 73.0 1e-138 MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRI IEIYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDN GEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGN AKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQG KNNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQIEDEEEPDLLLES >gi|333032579|gb|GL891847.1| GENE 37 35653 - 36135 576 160 aa, chain + ## HITS:1 COG:VC0544 KEGG:ns NR:ns ## COG: VC0544 COG2137 # Protein_GI_number: 15640566 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 21 156 9 146 152 73 37.0 2e-13 MFKRNDEQSQQRPPLTGQRLRSYAFALLTRRDYSKAELIEKLARYAQNIEEVKQLVEELS EQNYQSDQRVAEQMLASQIRKGKGPKRIQQALKTKQIENDLIADEIQEIDWVEQAYQLKV KKFGEAVEKDPKLKAKQIRFLQYRGFDLDVILKAIQRKLD >gi|333032579|gb|GL891847.1| GENE 38 36563 - 37447 904 294 aa, chain + ## HITS:1 COG:PA0974 KEGG:ns NR:ns ## COG: PA0974 COG1729 # Protein_GI_number: 15596171 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 3 291 1 265 274 78 27.0 2e-14 MQMKKHSLLFIALMSTTSLYANIPIESRGLSQNDGSASNTSSSNISVPTNLNWELMQKNQ QLENDIRTLRGQLEEQANDIEQLKKDLANRYTDLDQRLELLHQKVDPDSATQDDSSNATS DNTTPASAPAPQTTESNKVAAVPATQTSEQQPSAPTTTTQPAPAAAQNQSNSLELEKAAY TVALDAYKQGGAKKAIAPMQNFIKNHPNSIYTGNAYFWLAEFHLATDPVNYNEAKKNYNV VANQYPNSSKAPRALYQLYSIAKDVDKNTVSANQYKNKLLSQYPKSEEAKFFNK >gi|333032579|gb|GL891847.1| GENE 39 37501 - 38289 622 262 aa, chain - ## HITS:1 COG:VC2248 KEGG:ns NR:ns ## COG: VC2248 COG1043 # Protein_GI_number: 15642246 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase # Organism: Vibrio cholerae # 7 262 8 262 262 284 53.0 1e-76 MSNHDLIHSTAIIDPSAVIASDVQIGPYCIIGPQVTIGAGTKLHSHVVVGGFTRIGQNNE IFQFASVGEVCQDLKYKGEETWLEIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNT HIAHDCIVGDHNIFANNVGVAGHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGASLILKDV PAYVMASGNPAHAFGINIEGMRRKGWSKNTIQGLREAYKLIFKSGLTSVQAIDQIKSEIL PSVPEAQLLIDSLEQSERGIVR >gi|333032579|gb|GL891847.1| GENE 40 38286 - 38771 548 161 aa, chain - ## HITS:1 COG:PA3645 KEGG:ns NR:ns ## COG: PA3645 COG0764 # Protein_GI_number: 15598841 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases # Organism: Pseudomonas aeruginosa # 16 157 2 145 146 163 52.0 1e-40 MTESTTPKFAIPELPMQIQTIRQYLPHRYPFLLVDRVTEVTDNSIVGYKNVSINEEFLQG HFPEYPIMPGVLIVEALAQVSGVLGFIMNNETPKPGSLFLFAGAERVRFKKQVVAGDQLV LKSELVMQKRGIYKYNCTASVDGIVAATAEIMISHQKTEQA >gi|333032579|gb|GL891847.1| GENE 41 38778 - 39848 837 356 aa, chain - ## HITS:1 COG:PA3646 KEGG:ns NR:ns ## COG: PA3646 COG1044 # Protein_GI_number: 15598842 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase # Organism: Pseudomonas aeruginosa # 1 338 2 340 353 256 42.0 4e-68 MKVQQYRLDELAHLVKGELIGEGSLQFSNLASLENAEVNHLTFVNGEKHLDQAKVSRAGA YIVTAALKEHLPEKDNFIIVDNPYLAFAILTHVFDKKISSTGIESTAQIHPSAVISKTAY IGHYVVIGENCVVGDNTVIQSHTKLDDNVEVGKDCFIDSHVTITGGSKLRDRVRIHSSTV IGGEGFGFAPYQGKWHRIAQLGSVLIGNDVRIGSNCSIDRGALDNTILEDGVIIDNLVQI AHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSMVTKNISE AGTYSSGTGLFENNHWKKTIVRLRQLADVPLTQITKRLDHIQAQIESLESTFNLRK >gi|333032579|gb|GL891847.1| GENE 42 39853 - 40356 512 167 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001478 NR:ns ## KEGG: ABBFA_001478 # Name: not_defined # Def: chaperone protein skp precursor (cationic 19 kDa outer membraneprotein) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 167 1 167 167 223 100.0 2e-57 MNKLNKLMLGLGLTVASVAANAAGYGVIDLAKVVESSTYLKQQNASLNQSVKPTTTKLEQ LGKELEGLQRQAQTQGQKMKEDEIKKLQSQYQSKLNEFNSTQQGLQSRVQTSLQSMNTTF ETRVKQAAEQLRKENNLDFILNKNSTVAYDAKYDLTDKMIQKVNSMK >gi|333032579|gb|GL891847.1| GENE 43 40398 - 42902 2938 834 aa, chain - ## HITS:1 COG:PA3648 KEGG:ns NR:ns ## COG: PA3648 COG4775 # Protein_GI_number: 15598844 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein/protective antigen OMA87 # Organism: Pseudomonas aeruginosa # 4 834 8 797 797 629 40.0 1e-180 MPLALVSAMAAVQQAYAADDFVVRDIRVNGLVRLTPANVYTMLPINSGDRVNEPMIAEAI RTLYATGLFDDIKASKENDTLVFNVIERPIISKLEFKGNKLIPKEALEQGLKKMGIAEGE VFKKSALQTIETELEQQYTQQGRYDADVTVDTVARPNNRVELKINFNEGTPAKVFDINVI GNTVFKDSEIKQAFAVKESGWASVVTRNDRYAREKMAASLEALRAMYLNKGYINFNINNS QLNISEDKKHIFIEVAVDEGSQFKFGQTKFLGDALYKPEELQALKIYKDGDTYSQEKVNA VKQLLLRKYGNAGYYFADVNIVPQINNETGVVDLNYYVNPGQQVTVRRINFTGNSKTSDE VLRREMRQMEGALASNEKIDLSKVRLERTGFFKTVDIKPARIPNSPDQVDLNVNVEEQHS GTTTLAVGYSQSGGITFQAGLSQTNFMGTGNRVAIDLSRSETQDYYNLSVTDPYFTIDGV SRGYNVYYRKTKLNDDYNVNNYVTDSFGGSLSFGYPIDENQSLSASVGVDNTKVTTGPYV STYVRDYLLANGGKATSKGTYCPTDANGNSQYDTEKGECKVPEETYDNAFEGEFFTYNLN LGWSYNTLNRPIFPTSGMSHRVGLEIGLPGSDVDYQKVTYDTQAFFPIGSTGFVLRGYGK LGYGNDLPFYKNFYAGGYGSVRGYDNSTLGPKYPSVNLQETKQNDSSPEEVGGNALVQFG TELVLPMPFKGDWTRQVRPVLFAEGGQVFDTKCNIDNSVYGNKGMKINGQTITDVRKYCE DNYGFDLGNLRYSVGVGVTWITMIGPLSLSYAFPLNDKPGDETKEIQFEIGRTF >gi|333032579|gb|GL891847.1| GENE 44 42961 - 44316 1418 451 aa, chain - ## HITS:1 COG:PA3649 KEGG:ns NR:ns ## COG: PA3649 COG0750 # Protein_GI_number: 15598845 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Pseudomonas aeruginosa # 1 451 1 450 450 365 43.0 1e-100 MNALFMIAAAALLLGPLIAIHEFGHYWVARKLGVKVLVYSIGFGPTLLKWTSKKSGIKYQ LSALPLGGYVKMLDEREGNVAEQDLPYAFNRQKPWKRIAIVAAGPLINLIFAVLLFWILF LPAQEQLNTKIGKIIPNSPAAAAQLHVGDKIIAVDGKETATWEKLNFALIDRVGETGTVN IDVDRAGSEKNFVLPIKDFLKNQNESALDVLGFLPYRPVIPAVVTELTEDGAAIRQGMKV GDRIVAIDGQPMKDWFDVVEVVQRSPEKLLKIDVLRHEQLVHLQVMPQGKRDSMGQVNGV LGVKSDAGKITIPDEYKQTIQYTPIQAFEMALDKTGQISSMILNSIVKMVKGLIGLENLS GPITIAKVAGQSAEMGWETFISFMALMSVSLGILNLLPIPMLDGGHLVYYIIEAIRGKPV SEQIQMFGLKIGMVLLGSMMLLALFNDFMRL >gi|333032579|gb|GL891847.1| GENE 45 44318 - 45514 970 398 aa, chain - ## HITS:1 COG:PA3650 KEGG:ns NR:ns ## COG: PA3650 COG0743 # Protein_GI_number: 15598846 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Pseudomonas aeruginosa # 3 398 5 396 396 408 57.0 1e-114 MTQSVCILGVTGSIGRSTLKILGQHPDKYSVFAVSAHSRISELVEICKQFRPKVVVVPEQ KIVELKTLFAQQNISDIDVLAGQEGLVDIASHTDVDIVMAAIVGAAGLLPTLAAVKAGKR VLLANKEALVMSGEIMMQAARDHQALLLPVDSEHNAIFQSLPHNYLQADRTGQPQLGVSK ILLTASGGPFLNHSLEQLTHVTPQQACKHPNWSMGQKISVDSATLMNKGLELIEACHLFS ISEHFVTVVVHPQSIIHSMVQYVDGSTLAQMGNPDMCTPIAHALAWPERLQTNVPALDLF EYSQLNFQAPDTQKFPALNLARQAMRAGGLAPTILNAANEIAVEAFLMERIGFTSIPQVV EHTLEKLENAAAESIECILDKDKVARSVAQQYISSIGG >gi|333032579|gb|GL891847.1| GENE 46 45515 - 46339 774 274 aa, chain - ## HITS:1 COG:YPO1050 KEGG:ns NR:ns ## COG: YPO1050 COG0575 # Protein_GI_number: 16121350 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Yersinia pestis # 4 267 5 281 282 141 40.0 1e-33 MLERIVTALVLVAVVLGCMFATQSHYPMLVLMIVAAGVAGYEWYKLMPREVGAVVKPKAW GYGLLVAFVSGVALFFHDIALLLWSASILTWLVSVYWVKSFPEFDGWYNATLYVIGLILI CAAVTAIFVVWQSSPWWLMYLFLLVWGADSGAYFVGRKFGKRKLAPTVSPNKSVEGLYGG ILTTIIVMLVVQYQYLNLTWVQQLLFLILSLITVFGSVLGDLFESMIKRRAGIKDSGRVL PGHGGVLDRIDSLLAAAPIFATGMYILKLIGVDL >gi|333032579|gb|GL891847.1| GENE 47 46339 - 47091 684 250 aa, chain - ## HITS:1 COG:NMA0081 KEGG:ns NR:ns ## COG: NMA0081 COG0020 # Protein_GI_number: 15793110 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Neisseria meningitidis Z2491 # 5 246 10 245 248 233 48.0 3e-61 MTDSEEYHLPQHVAIIMDGNNRFAKKNQMQKGDGHREGKNVLDPIVEHCVKTGVRALTVF AFSSENWNRPQYEVDLLMKLLEETIHEQIPRMKKFNIALRFIGDRSRLPSHLVALMEDAE QQTAHHDAMTLTIAVSYGGMWDIANAAKQVAQAVSRGEIDADQINVDLFEKYVSLNDLPA VDLLIRTGGDFRISNFLLWQAAYAELYFTDTLWPEFTVEEFDHALNVFSGRERRFGKTSE QIQQEKIEKL >gi|333032579|gb|GL891847.1| GENE 48 47097 - 47651 843 184 aa, chain - ## HITS:1 COG:PA3653 KEGG:ns NR:ns ## COG: PA3653 COG0233 # Protein_GI_number: 15598849 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Pseudomonas aeruginosa # 1 184 1 185 185 209 64.0 3e-54 MINDLKKDSEQRMLKTLESLEQGFAKVRTGRAHPSILNGVMVPYYGSDVPLNQVANVGVE DSRTLIVQPFERTMVAAIDKAIRESDLGLNPITADSIRVPLPALTEETRRDMQKIARSEA ENAKVAIRNIRRDVLGDIKALLKEKEISEDDERRAGDDIQKITDKYVAEVDKRLAAKEAE LMKV >gi|333032579|gb|GL891847.1| GENE 49 47737 - 48465 903 242 aa, chain - ## HITS:1 COG:PA3654 KEGG:ns NR:ns ## COG: PA3654 COG0528 # Protein_GI_number: 15598850 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Pseudomonas aeruginosa # 1 240 1 242 245 300 64.0 1e-81 MAETISPRYSRILLKLSGEALSGNKDMGIDAQVLDQMSLSIAHLVGLGVQVGIVVGGGNL YRGSQLQKDGLVGRVTGDQMGMLATVMNGLAMRDALVRRNIRTRLMSALPIGTVVESYSS RDAIRHLSQGEVCVFVAGTGNPFFTTDTAACLRGIEIEANLILKATKVDGVYNKDPSKYE DAVKYDHLTFDQVLDEKLGVMDLTAICLCRDHNVPLQVFDMNKSGALLSVVMGEKEGTRV TK >gi|333032579|gb|GL891847.1| GENE 50 48517 - 49860 718 447 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229870452|ref|ZP_04490046.1| SSU ribosomal protein S12P methylthiotransferase [Spirosoma linguale DSM 74] # 1 444 6 437 437 281 38 1e-74 MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESL DAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHN PFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKR AGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPH VDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPDLVIRST FVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERF MQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQ PGDMLEVEITDADEYDLFAKLIKIKSV >gi|333032579|gb|GL891847.1| GENE 51 50202 - 51311 1053 369 aa, chain + ## HITS:1 COG:PA5124 KEGG:ns NR:ns ## COG: PA5124 COG3852 # Protein_GI_number: 15600317 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrogen specific # Organism: Pseudomonas aeruginosa # 9 363 7 354 358 296 45.0 4e-80 MDQHTPIDYRLLVDNLTTAILLIDSNFNIFYLNSACEALFDISLLRASGQPVLNLLHAPD DTFNTHEALLNTLKTGQPYTRREAIINVNFKDLHVDYTVSQLNAGKSYHPLLLIELNPID RMLKISKEENLIQQHQVARQLVRGVAHEIKNPLAGIRGATQLLARSLNDESYAEFTDIII NEVDRLTNLADTMLGSRQLPSYENVNVHEPLERVRSLIANQTKKKIKITRDYDLSLPDVK ADRDQLIQVMLNISVNAIQAITENKSFFTDQEPELILRTRIQRLVTINGVLNRSAVRVDI EDNGPGIPESILESVFYPLVTGRAKGTGLGLSIAQNIMHQHNGMIECQSVPGKTMFSLYL PWESDRVAK >gi|333032579|gb|GL891847.1| GENE 52 51298 - 52791 1411 497 aa, chain + ## HITS:1 COG:PA5125 KEGG:ns NR:ns ## COG: PA5125 COG2204 # Protein_GI_number: 15600318 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Pseudomonas aeruginosa # 1 488 1 476 476 638 65.0 0 MSRNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGI DGLTFLSKVKNSHPDLPVIIMTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAIL HINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLSQSHITVLINGESGTGKELVA HALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFL DEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLY HRLNVIRIHIPKLAHRSEDIPMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVR QLENTCRWLTVMITGREVYPEDLPSELKQVPLQKSSETSQPAPSFERISLHHWDELLSQW AIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMD SADDDDEDEHKATLSEA >gi|333032579|gb|GL891847.1| GENE 53 53067 - 53720 414 217 aa, chain + ## HITS:1 COG:BMEII1117 KEGG:ns NR:ns ## COG: BMEII1117 COG1309 # Protein_GI_number: 17989462 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 24 216 53 246 247 76 27.0 4e-14 MHDPVLESHHLVCEKPQTRRGIERRLALLLSATELFLEKGYDAVSLDDIVNHAGGSKTSI YKYFGNKDGLFTAICDYRREMFFKDICIAFQPEQTSLKDYLIQTLIRFYKHIIQPEHIAF LRLVIEQTQCNATLSQYLYEKCALDVQNTIAQALLISHQSGEITCTSPDHSSLMYFGILR DIEWRMIMGMPLPPNETEVIDYINYCVDIFLKGHHKV >gi|333032579|gb|GL891847.1| GENE 54 53833 - 54753 936 306 aa, chain + ## HITS:1 COG:PA3537 KEGG:ns NR:ns ## COG: PA3537 COG0078 # Protein_GI_number: 15598733 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Pseudomonas aeruginosa # 1 299 1 299 305 387 62.0 1e-107 MALRHFLTLRDLSTLELNRILERASELKKMQQSNKVYQPFVGKVLGMIFEKSSTRTRISF EAGINQFGGSAIFLSPRDTQLGRGEPIEDSARVISSMLDIVMIRTFGHDIVERFASYSKV PVINGLTDDHHPCQLLADLQTYIEHRGSIEGKTVAWIGDGNNMCNSYIEAAHMMGFKLKI ASPKSYEPKPEFLAEFGHCVELFDNAEDAAVNADLIVTDVWASMGQEEEQKLREKAFADF QVNEKLMGLAHPDCLFMHCLPAHRGEEISETMLDHKNAVVWDEAENRLHAQKALMEFLLN ENLKKA >gi|333032579|gb|GL891847.1| GENE 55 54947 - 55471 468 174 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001465 NR:ns ## KEGG: ABBFA_001465 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 174 1 174 174 328 100.0 4e-89 MTTLEQSLSEITAFSIIHEHLFSSAQPSIEQLKLIKEYGCSTVINLALSNSPDSIKNEDQ VCLEYGLNYIHIPIDWETPSSDQCLLVLDLIDHLVQNEIVWIHCAKNKRVSCLMYVYRQF YMNMDMPTCQDLLHEIWEPNETWTGLIHSITLQLQGRKATLELQQSLQQTNDLV >gi|333032579|gb|GL891847.1| GENE 56 55468 - 55950 690 160 aa, chain - ## HITS:1 COG:PA3627 KEGG:ns NR:ns ## COG: PA3627 COG0245 # Protein_GI_number: 15598823 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Pseudomonas aeruginosa # 5 158 1 154 157 188 60.0 4e-48 MVAQIRIGQGMDVHAFEEGNFVTLAGVQIPHTHGLKAHSDGDVVLHALCDALLGALALGD IGQHFPDTDPEFKGADSRVLLKHVYQLILDRGYHLNNADITVACERPKLAKYNLEMRQSI ADVLNVDLNQISIKATTTEKLGFTGRQEGILATATVLISH >gi|333032579|gb|GL891847.1| GENE 57 56054 - 56698 379 214 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001463 NR:ns ## KEGG: ABBFA_001463 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 214 1 214 214 392 100.0 1e-108 MPSNTDMNQLKRLSFVVTLSCLCSSLVFAESIDCSNSKAELKICSKTFSEARKQLNNKYL SAYLVTDAPLQLLQDTQTLWLRQTQQCKTNSCIQQQFDVRGDDLNFYASLKQTLTQHYLK FENGHIASQPVHLQIHQLAKDKIKIEGLAYRNPNNRKETQTVSLMAYSSPEQKSEILDNE HNCKYKFDFQKALLIVKTQQKGCERFTGIYRLYD >gi|333032579|gb|GL891847.1| GENE 58 56745 - 57989 1015 414 aa, chain - ## HITS:1 COG:mlr9201 KEGG:ns NR:ns ## COG: mlr9201 COG0665 # Protein_GI_number: 13488236 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Mesorhizobium loti # 1 413 1 405 412 487 56.0 1e-137 MPHVIVIGAGITGVTSAYELSQLGYQVTVIDRHLYPAMETSFANGGQLSACNAEVWNQKA TVIKGFKWMRQKDAPLLLNPSFSLHKYSWLVEFLSHIKNYEANTIETVRLALLARKRLFD VAEKEQLQFDLEKRGILHMYHTRDDYDIAKRVNDVLNKGTLERYSVSPEEMKSIEPSLTG EYFGGYYTPSDATGDIHKYSTSLAEKTKQYGVQYKFGLEVTDIKCHADKVVLNCQPSAEH PHLSQTDSFQLEGDVLVVCGGVGSYQLADMIGERVNVYPVKGYSITVQLKDEKSIKNAPW VSLLDESAKIVTSRLGPDRLRVAGTAEFNGYNRDIRADRIQPLVNWVNRNFDISTEHVVP WAGLRPMMPNMLPVVKQSKQSRVFYNTGHGHLGWTLSAATAVLVSQDIQQKYPA >gi|333032579|gb|GL891847.1| GENE 59 58400 - 58891 501 163 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001461 NR:ns ## KEGG: ABBFA_001461 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 163 1 163 163 313 100.0 2e-84 MLSIYLTDTQQHVQFNDYPSDQPVKFLLNLKKIFPSTGDLLLPVLPEDNDLENVTWESTS KDFEIFKKLLAGWGVIELRLNAITAYKDKNFANELIKQAQAKRKKVAQKNHQLSLVALDY IFMHEIHALIDAELFTIGEKFYLPTLREQWKGTVSDQVLNGKL >gi|333032579|gb|GL891847.1| GENE 60 59203 - 59664 337 153 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001460 NR:ns ## KEGG: ABBFA_001460 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 153 1 153 153 241 98.0 9e-63 MNRLQLILLVLSTATFSPFVFSETTISPTKYEFYGQESKRHKSMLEVNNSSDHKINESQH NPFRSDSNKQNVDFFEIAKHYQEEQPQNTYSHSPDHTVNMSDHERSLYYIRSHDNMGLQR DVRYQQYRSLKQQYDKGVISRDEYKNKVYKISR >gi|333032579|gb|GL891847.1| GENE 61 59846 - 60142 334 98 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001459 NR:ns ## KEGG: ABBFA_001459 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 98 1 98 98 188 100.0 6e-47 MKIRASRTYSTYSNNYFISKEYECSVIPVKGMCFTDLGLTENGVIQPVEINEVTIDPASN SYHILLAKDSHEYTKEELKRKFEEMKANGWEYIEDLLV >gi|333032579|gb|GL891847.1| GENE 62 60276 - 61670 1798 464 aa, chain - ## HITS:1 COG:NMB1458 KEGG:ns NR:ns ## COG: NMB1458 COG0114 # Protein_GI_number: 15677314 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Neisseria meningitidis MC58 # 1 461 1 461 462 657 75.0 0 MQTRIEHDTMGEIEVPNEALWGAQTQRSLQNFKIGQERLPRAMIRAMGLVKKAAAITNAE LGQLPQDLSQYIVGAAEEVIAGKWDSQFPLVVWQTGSGTQSNMNCNEVIANIANQKLGQA LGAQKPVHPNDHVNRAQSTNDSFPTAIHVAASLQINELLIPAVEQLKATLQKKSDEFQDI VKIGRTHLQDATPLTLGQEFSGYVSQLEHGLVRLQQALSGLYELPLGGTAVGTGLNAHPD YAVKAAAQLAALTGLPFVTAPNKFEALAGRDAAVFASGALKTLAVSLNKIANDIRWLASG PRCGFGEIRIPENEPGSSIMPGKVNPTQSEAMTMVVAQVLGNDTTINVAGASGNFELNVF MPVIAYNLLQSIQLLGDACNSFNDHCAVGIEPNREKIDHFLHNSLMLVTALNPVIGYENS AKVAKTAYKENKTLKQVAVELGLVTAEQFDEVVKPEKMVSPNSK >gi|333032579|gb|GL891847.1| GENE 63 61785 - 62792 1210 335 aa, chain - ## HITS:1 COG:SP1607 KEGG:ns NR:ns ## COG: SP1607 COG1087 # Protein_GI_number: 15901447 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Streptococcus pneumoniae TIGR4 # 2 334 5 336 339 216 35.0 6e-56 MILVTGGLGFIGSHIALSLMAQGQEVVLVDNLANSTLQTLERLEYISGMYVPFVKLDVRN TPALNKVFEQYSIDAVIHTAGFKSIEESNLKPLEYYNDNVSCIMSLLRAMQRTGVRHFIH LSSLAVYGKSGSQLSETDDFNYAYPNPYIKSQQMIEEIIRDTYKIDHEWKIAILRLSNIV GAFEHGVLGEYVAQLPKNIVPLAMQVAAMQRDLIELQDQSSTEDHTVERSFLHVLDVCEA VSSTLHWLRDQTHCCEAFNIAHEQVHSIRQLLDEISQVTQAEIPTQSAIYKHEELAQIGA NIGKAKTLLQWVPKRTLKQMIEDEWRFYQNTLNGR >gi|333032579|gb|GL891847.1| GENE 64 62858 - 63226 206 122 aa, chain + ## HITS:1 COG:VC0356 KEGG:ns NR:ns ## COG: VC0356 COG1553 # Protein_GI_number: 15640383 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized conserved protein involved in intracellular sulfur reduction # Organism: Vibrio cholerae # 3 122 5 131 131 72 38.0 2e-13 MSTLLLITSAPTSIHAWHALGLAQALKSKNEDFRVFFYQDGVQVANDFQWVPDDQRNLTH EWQKLSIRLPVCVSAALARGITDAENASRHQLSHHNLANNFELVGLGELADAVQSASRLL QF >gi|333032579|gb|GL891847.1| GENE 65 63271 - 63621 288 116 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001455 NR:ns ## KEGG: ABBFA_001455 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 116 1 116 116 195 100.0 6e-49 MKTVLVILTQANLTSLQVNESLAATMVLATFGSPVKVLLKDAALSLLQNERNFDQLQHAF KIASNMVDSFEFYDLSPILIEAKNKQHPFVQNSEQELEFVQLDTELIQSFDHVLYW >gi|333032579|gb|GL891847.1| GENE 66 63639 - 63923 241 94 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1559 NR:ns ## KEGG: ABAYE1559 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 94 9 102 102 173 100.0 2e-42 MTQSTLYLVQASYHHTPRIIEELAKLFHKDDQIVFMGDSTAQLSVNICQQFGSVSCLSHE KDLIDAETLAQVKVLNYDQFADLVLQFNRCISLK >gi|333032579|gb|GL891847.1| GENE 67 63943 - 64254 373 103 aa, chain + ## HITS:1 COG:PA2608 KEGG:ns NR:ns ## COG: PA2608 COG2920 # Protein_GI_number: 15597804 # Func_class: P Inorganic ion transport and metabolism # Function: Dissimilatory sulfite reductase (desulfoviridin), gamma subunit # Organism: Pseudomonas aeruginosa # 3 103 11 111 111 84 41.0 4e-17 MNLELDQDGHLVDYTIWNPEVAQELAKSLDLELTDWHFEVLAAVRQFYQQFGHSPATRPL IKFLMKTVSPDINNAVLQQKFNTGLVARHLSRLAGIPKPANCL >gi|333032579|gb|GL891847.1| GENE 68 64259 - 65122 767 287 aa, chain - ## HITS:1 COG:AGc394 KEGG:ns NR:ns ## COG: AGc394 COG0697 # Protein_GI_number: 15887584 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 287 1 290 291 282 61.0 4e-76 MQKFMNGWVNGFIGVAIFAGSLPATRVAVTGFEPGFLTAARAVIAGVLGLILIFLLKEKK PAKQDWWPLAIVALGVVVGFPLFTALALQYMNAAHSIVFVSLLPLATAIFAVVRGGEKPN LFFWIFAILGSLVVFTYMFFLSGEASFGIGDLYMLIAIILCGFGYAEGGVLSKKIGGWQV ICWALILALPIMLLATLFYMPVSFQDVSTSAVAGLVYVSLFSMLIGFFFWYKGLAQGGIA AISQLQLLQPLMGLAIAALLLHEHVSWSMLMVTAVTILCVAAAKKFA >gi|333032579|gb|GL891847.1| GENE 69 65245 - 66648 1174 467 aa, chain + ## HITS:1 COG:mlr1139 KEGG:ns NR:ns ## COG: mlr1139 COG1167 # Protein_GI_number: 13471226 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Mesorhizobium loti # 6 458 18 470 472 575 60.0 1e-164 MNQTKTKIELVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKI ESRSGSGFYVVAPLAPLALSELGPKLDRSIDPLWISRQSLEAEPNAFKPGCGWLPNDWMP LESIRKALRSATRSEDDSLLGYSSPLGLPALRDLLARRAQSKGIEANLNQVLLTDSGTQA IDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDLEAFKEAIESYNP RLYITNSGIHNPTGATLSLSTAHQLLKLIDQSNLIVIEDDIFSDFEYTPAPRLAALDNLS RVIFIGSFSKTLSASIRCGYIIAKPEWIDQITDLKIATSFSHNGLSAKILHTALTDGSYR KHLDLLKVRLAQAMQETIAKLKSIGIEPWIEPKAGIFVWCRLPEGVDAAKIARFCLNRQV ILAPGNAFSQAQSAGQFIRFNITQSNHDYIYKTLAEALLQESLEKQV >gi|333032579|gb|GL891847.1| GENE 70 66645 - 67127 653 160 aa, chain - ## HITS:1 COG:PA2713 KEGG:ns NR:ns ## COG: PA2713 COG1733 # Protein_GI_number: 15597909 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 159 1 158 159 210 58.0 9e-55 MKWDDIGDQPCSVARMLSVIGDRWTMLILRNAFMGIRRFDDFQKSLGVTRHVLSDRLKRL VEYEILVKAPYFDRQERFEYRLTDKGFELYPIILSMANWADKWMDQGLGKPLEYRHKACG HKFEPVMVCSVCREPLHAKQVQVSAGPGYFAYMEQKQKQA >gi|333032579|gb|GL891847.1| GENE 71 67336 - 68571 1131 411 aa, chain - ## HITS:1 COG:HI1448 KEGG:ns NR:ns ## COG: HI1448 COG0303 # Protein_GI_number: 16273355 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin biosynthesis enzyme # Organism: Haemophilus influenzae # 10 390 1 379 404 189 32.0 1e-47 MSGCGAEHGLISIDEALDLVINKPKNLSSIQKTLKNSLSSYLAKEIYSEINLPSFSQSAV DGYALCSHTEDLNNQKFQVTGEIRAGSESHDILGEGQAIRIFTGGKIPEGTTHVARQEIV SVISAQEICLTEYIRPQADIRFTGEEIQQGQLLAQVGQFLNIGSLAALSMAGVQELTVYR RPKVAVLVTGDEVAQTAEDLIDGKVFDANGPLLKAWFEDYGLDVELIHVADEADQVTHYF NQLKDSHDVVITTGGVSVGDYDFVRPCAFEVGFEQIFWKVKQKPGKPLFFAEYHNSQASH SCYLLGLPGNPAAVYVAMQVYGKSLLDALQGNRHGPEWFTAILEHDLKEDARERFLRMYA YFDAGQLRVKSLAKQQSHMLSNLMQANCLVRIPASTKLASGTVLKGIFISN >gi|333032579|gb|GL891847.1| GENE 72 68571 - 69494 1046 307 aa, chain - ## HITS:1 COG:VC1026 KEGG:ns NR:ns ## COG: VC1026 COG0315 # Protein_GI_number: 15641039 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Vibrio cholerae # 1 141 16 157 160 116 47.0 5e-26 MKNVGMKPESYRVAEAQAILYAPPHCIELLRQGNTEKGDALKTARVAGILAAKRTDELIP LCHPLPIYRADVEYELEHDFVKIIAVVETIGPTGVEMEALTAASLAGLTIYDMLKPHCEP EELWMDQCKLLKKKGGKSHFKRVLRQPVSAAVIVLSDTVAAGRKPDTAGKSVVETLTEAG FDPIHYQILPDEADDLKELVLELTKSYACIMTVGGTGIGKRDITVDTLEPLLERKLDGLM EAARSFGQKRTPYAAMSRGVAGFIDRSLVVTLPGSRGGASESMAAILPALVHIFDVCRDL PHPGGYE >gi|333032579|gb|GL891847.1| GENE 73 69518 - 70003 534 161 aa, chain - ## HITS:1 COG:BS_moaE KEGG:ns NR:ns ## COG: BS_moaE COG0314 # Protein_GI_number: 16078494 # Func_class: H Coenzyme transport and metabolism # Function: Molybdopterin converting factor, large subunit # Organism: Bacillus subtilis # 25 131 24 130 157 94 42.0 7e-20 MKEFARIQEQALSLDTFDPIQSFPECGGIDIFMGTVRNHHEGKAVKALKYTSYKPLAEKM IREIELEIEKKYQVSYVRVVHRIGYLDVGETAIIAIAYAAHRREAFQACEEAVERVKHEV PVFKEEFFTDGTSHYVEGCCIRKDAPHDHKHHHHAGHEHSH >gi|333032579|gb|GL891847.1| GENE 74 70007 - 70261 174 84 aa, chain - ## HITS:1 COG:no KEGG:A1S_1998 NR:ns ## KEGG: A1S_1998 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 84 1 84 84 143 98.0 3e-33 MQQSIQIKVEAFGAIEKLLPENLLLVCPSHSLVKDVLDEIVLLHPESTKAMEKCACAISD NVITRQTVLSEPCTLVLLSPVAGG >gi|333032579|gb|GL891847.1| GENE 75 70262 - 71176 776 304 aa, chain - ## HITS:1 COG:BH2526 KEGG:ns NR:ns ## COG: BH2526 COG2896 # Protein_GI_number: 15615089 # Func_class: H Coenzyme transport and metabolism # Function: Molybdenum cofactor biosynthesis enzyme # Organism: Bacillus halodurans # 2 304 40 338 338 188 35.0 1e-47 MPEHPEWLNKQDLLSFEALFQFCHFMVQQGIQSIRITGGEPLMRQGIVHFIRDLQSLKSL GLKRISMTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPVQFKELTKKKLEPVLEGIQAAK EVGLPFKINCVLMKDRNDDQILPMVKWSIAHHIPLRFIEFMPLDGDALWSNKDVVSEAEI LQVLQPYYSVQVIEQQHEPARQYLINGSYHLGIISTITHSFCHQCDRIRLTAKGELYNCL FAPEGLNIKPQLQTLVSKQHTPEYGMYIQKLKNLVHPYIWHKAKGFHALQHQQTRKISMH MLGG >gi|333032579|gb|GL891847.1| GENE 76 71528 - 73801 1679 757 aa, chain - ## HITS:1 COG:MT0207 KEGG:ns NR:ns ## COG: MT0207 COG0243 # Protein_GI_number: 15839577 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Mycobacterium tuberculosis CDC1551 # 13 756 10 741 749 580 41.0 1e-165 MMDAAQQSKTDVTACILCSRNCGLSVEIKDNQFVKIKGNPEHPFSQGYICQKAARLQHYQ KHADRLTAPLKRQPDGSFKEISWDVAIQEIADQLVQIRDKFGGTAFASVGGGGQGNHLGA AYGRQLLLAMKSYYAYNSLAQEKTGDFWLNGRLFGSQACHTTEDVEHADYVLFIGTNPFQ AHGIPNARDTLKHIKKDPNRTMVVFDPRVTETAKQADIHVQLKPGTDAFLMSAMIAIIIK EKLYDAAFIEQHTHGFEEVKAAFNHVPIEDYIAKADVPVDLIYHVVRDFSKAKRGCVRID LGIQHTLNTTLNGYLEKLLYLLTGNFGKQGTNNLHTMFIPILTDTDERKPKYRRSVYHKM FPISGFFPPNILPDEILKAGEKRIRAVFVDSCNPLLTYPDTPAFEEAFKALDLLVVVDVA MTETARLADYILPAHTQFEKWEFTGFNLEFPKNGFHLRHPVLAAQANTLPEAEIYTRLLE AMNAIPKSFPVLEKIAAVDSKKTAYLPYLSALGITLARHKKYIPFAASIIYRTLGKRLGN SADSVAFLLPLSIQYAVLHTKAVRRAGYKGNPLTQGVKLFEQILKQRSGMVLSQHEYDEV WKLVAYKDKKIRLAIPEMLSELASLKSHNVNVEEFPFILLSGERRSYNANQIYRDPAWRK VDAEGALRIHPEDARHLNVDAGGQLKCISAHGEIQVAIELDDGMRRGVVSLPHGYGMRFQ NGEPIGPQLNLLISAEHCDPLSKTPYHKYVPIRLEKC >gi|333032579|gb|GL891847.1| GENE 77 73951 - 74331 182 126 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1547 NR:ns ## KEGG: ABAYE1547 # Name: mobA # Def: molybdopterin-guanine dinucleotide synthase # Organism: A.baumannii_AYE # Pathway: not_defined # 1 126 91 216 216 242 99.0 4e-63 MGMKSAWSHVRADYVLFIPCDVTYIPTQVVAKLHSALRKNKQAQAAYVSINGDALYPFCL LKRESLEVLEQQIDKQQLSLKNCFKLLHAQVAIFQKQNLFFHSINSLDELQQYKQIKAFK EIFSTN >gi|333032579|gb|GL891847.1| GENE 78 74577 - 77357 2487 926 aa, chain - ## HITS:1 COG:RSp1219 KEGG:ns NR:ns ## COG: RSp1219 COG0243 # Protein_GI_number: 17549440 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Ralstonia solanacearum # 15 917 11 904 913 1026 53.0 0 MNSIPSVEIDSSDHVAKITKTTCPYCGVGCGVSVNVQQKPQGPVVQVEGDAEHPSNFGRL CIKGSRLADTLGLETRLLQPMFGRKPLRTVTTWDAAINKIADKFQSCIDKYGRDSIAFYV SGQLLTEDYYVVNKFVKGYLGTANIDTNSRLCMSSAVAGHKRSFGEDIVPASYEDFEHAD MVVLVGSNTAWCHPVLYQRIMQAKSHNPDMFVVVIDPRFTSTCEQADLHLPILPGQDVAL FNGLFQYLYQNGHADQVFVDAYTEGLQEVLASSQQETDIAYVAKRSGISLDKLQQFFEKF AQTEKVITLFSMGVNQSSQGVNKANSIINCHLLTGKIGKLGAAPFSMTGQPNAMGGREVG GLANMLAAHMDLDNPLHQKVVQTFWDSPFIATQAGLKAVDLFHAVEAGKIKAIWIMATNP VVSLPDADQVKRALEKCELVVVSDICVDTDTTAYADILLPALGWGEKDGTVTNSERRISR QRAFLPAPGEAKADWWAMSQVAKKLGFKGFDFNNAVDIFNEHAALSAQDNADIEAREQTD TFRYFNLKGLMNLSTAEYDALQPVQWPVWDKKQDAKAVHQLFCKGQFSHKNAKAKLIPTV AINPVHAISEDYPLILNTGRIRDQWHTMTRTGLSPNLTSHRAEPFCEIHPSDALKFGVRD QGLVEVRSKWGSCVLRVTFSSGVRRGQIFAPIHWTEQVASDARIGKVVNPEVDAISGEPE FKHTPVTIQPFYTTWQGVLYIREGYDSHIQESLHHCAWWTKVKMVKTNRYELADRQTFHD TQKNLKSFLPFADETFEWLSIEDISSQLSHSIILKDGIVIASLYIAPPDLLPDRDWVASL FKRERLSALHRKALLAGMPMSATNNDGPLVCSCFKVGKNKIIEAIKTQNITHEKQVTACL KAGGNCGSCLPEIRGLIKACQQEVEV >gi|333032579|gb|GL891847.1| GENE 79 77376 - 78998 1848 540 aa, chain - ## HITS:1 COG:RSp1220 KEGG:ns NR:ns ## COG: RSp1220 COG1251 # Protein_GI_number: 17549441 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Ralstonia solanacearum # 137 532 8 401 409 458 55.0 1e-128 MNIVQDKNMLPDDQWIDVCALDDLTPNTGAGALVGGQAVAIFRVGHEKRVYVLSNKDPFS QANVMSRGIIGDLQGERVVASPIYKQHFSLATGRCLEDKDQKLAVYPSKIVDGRVWVNAV PQKTYITNTGVSQDKLRLVLIGNGLAGMRCLEDLLDMAPDRYEVTVIGEEPWGNYNRIML SPVLSGEKTIEDIMLHPPKWYDDKGIKFIAGDKAVKIDRPRKVVYTEKGQTVDYDRLILA TGSAPFIPPVQGVDLKGVLTFRDIYDVNTMIEYCGSKTNAVVIGGGLLGLEAAYGLKQRG MNVTVLHLMDRIMERQLDGRASQLLRHSIEQKGIQIITEANTEALIGDENGHVKQIRLKD GTVLDADLVVFAVGIRPNIALAQSAGLRCNRGVLVNDTMQTFDPSIYAVGECIEHRGQTF GLVEPLWGQAFICATHLAEHGSLTFKAPTVPTQLKVSGVDVFSAGNFEPKDDYEDIILND EKRQIYKRIIIQNDRVIGAVLFGDTEDGMWYAELIADQTPVSSFRNKLLFGRDFALKNAG >gi|333032579|gb|GL891847.1| GENE 80 79011 - 81557 2785 848 aa, chain - ## HITS:1 COG:RSp1222 KEGG:ns NR:ns ## COG: RSp1222 COG1251 # Protein_GI_number: 17549443 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Ralstonia solanacearum # 1 846 3 848 852 1212 69.0 0 MKLVMIGHGMVGHKFIEAILEKADDELEITILAEEPRIAYDRVHLTEYFSGKSAKDLSLA RFDFADAYGIDLRLNTKAEAIDTAAQTVTTNHGDVISYDKLVLATGSYAFVPPIPGNDRE NCFVYRTIEDLDAIRAASLKAKTGVVIGGGLLGLEAAKALRDLDLETHVVEFAPRLMAVQ IDDLGGKVLRRKIEDLGVKVHTQKATQSIESGVNTTHVMKFADGSELETDVILFSAGIRP RDELARNSGLAIGERGGIVINDYCQTSDQNIYAIGECALWQNKIYGLVAPGYDMARIAAK HILDEECHCFAGADMSTKLKLMGVDVASVGDAHAMTPGALSYFYADEHALVYKKIVVNAD KTKLLGAVLVGDAKEYNDLLQMMLNGLALPEVPESLIMPGFEQSAAKSGGSGVDLLPDSA TICSCNNVSKADICQAISDGSTSLGALKKCTKAATACGGCAPLVTQVLKSELQRQGVTVN NHICEHFPYSRQELYHLVRVNEIKTFDDLIHQHGHGLGCDICKPAAANILASCWNDFVLK PSHAGLQDSNDYYLGNIQKDGSYSIVPRMAGGEVTPDGLIAIGQIAKKYNLYTKITGGQR VDMFGAQVHELPFIWEELNAAGFESGHAYGKSLRTVKSCVGSTWCRYGVDNSVGLAIELE NRYKGLRSPHKLKMAVSGCTRECAEAQGKDVGVIATEKGWNLYVCGNGGMKPRHAELLAS DLDKETLIRYIDRFFMFYIQTADRLQRTSVWRDNMEGGLDYLKSVIVDDSLGLAAELERR MEHIIGTYQDEWRTAVENPEVRKRFQTYINAGANEQADPHIQFTTERGQIRPLTEAERSE DRIPMVEA >gi|333032579|gb|GL891847.1| GENE 81 81569 - 81910 174 113 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1543 NR:ns ## KEGG: ABAYE1543 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 113 1 113 113 192 100.0 2e-48 MSVLIEFVSATVHTENLRSVGVKVMSLFLLHKKVTSELTNFSVSAMRAFRMRGLAFFICF YDFAMHWVSSTSGKNGFQAAIRFVMLIRFSVEHKAKQQCLFENARTQLKSNVI >gi|333032579|gb|GL891847.1| GENE 82 82295 - 82885 491 196 aa, chain + ## HITS:1 COG:AGl1879 KEGG:ns NR:ns ## COG: AGl1879 COG3707 # Protein_GI_number: 15891055 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 189 15 203 204 115 34.0 5e-26 MPKLKIALIDDDHARADYIKNSLLENDFEVVACLTLDHLNIFRLEDLQADVILLDMDHPH RDIIESCVSSYDLPTVLFTKNSDKDTIKQAIDAGVTAYIVDGIDPTRLHTILEISIEQYK KHKKLEGDLKEAQTKLADRKDVEKAKVLLMQLHGLPEDTAFQLLRKNAMSHRITIGEMAR RLLDAQKLLNDQLKDE >gi|333032579|gb|GL891847.1| GENE 83 82886 - 83896 810 336 aa, chain + ## HITS:1 COG:SMb21114 KEGG:ns NR:ns ## COG: SMb21114 COG0715 # Protein_GI_number: 16264441 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Sinorhizobium meliloti # 9 334 40 383 441 145 30.0 1e-34 MSKLEKTQLQLGYIPLLDCIALLWAKQQGFFEEVDLDVTLVKEASWASLRDRLAFGLLDA AHCLSAMLPAAAMGADQIGIALQTPLVLSKNRAFISLSQKLIYQLAIQESDNAQTTAQKV IQYIEQDHTLSLAHVFKHSIHHYCLREWLALADSRIAQTLKLKALPPPYMVEALDNHVID GFCVGEPWNTQGELLGLSKIVCSSQDIIPNVADKVLAVTQEWAEQHPQTLVALTTAIMKA QKELSNLKDFAPILKLLVEFGIVRFHCSEEVHVDKYYMIQNIVKYLVKENAAPQPEDFHW LFQQMQKWEKLQLAPDQIIELSAQCINLDCYNQAKL >gi|333032579|gb|GL891847.1| GENE 84 83822 - 84013 79 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDELSLLNVVMRITHLSYGSFKLSLLIKTAFFYNVLKYFLEFGLIVAIEINALCTQFYDL IRG >gi|333032579|gb|GL891847.1| GENE 85 84230 - 85558 1105 442 aa, chain + ## HITS:1 COG:PSLT054 KEGG:ns NR:ns ## COG: PSLT054 COG0389 # Protein_GI_number: 17233501 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Salmonella typhimurium LT2 # 9 428 1 418 424 257 36.0 3e-68 MKDISHREVYALVDINNCYVSCERLFNPKLNDKPVVVLSNNDGCVVSRSEEAKLLGIKMG VPWFQIEKDALQAGVQVYSSNYTLYAEMSRRFFAVLGEFFSPDDLEAYSIDECFIHLTPY LQSIDISDYCNKVRSTLLKWLGLPCCIGIGYSKTQAKLANHYAKKIKSFKGVCNFITLDP LIMEDLMQQTSVKEVWGIGYQLVKQLQSYEVYTCLDLTFANEHHMAKAFSVVMARTIREL KGQSCIQLDDPAIPTKRILASRSFAQALSSIEIIKQALIFHLNRAHRRLMKQEQLCACVQ VMLYEKTDKPPYKKATSQAIGLHYATDDLCILTKAAMQQIDVLYKENKSYIKIGVLFCAL HARQQHIDDLWQPLELIHQRQQLMETLGTVRKRFGSHYLQVGYHSRNPSWQMKQCHRSKN YLTRWNEMLTIEDAYTPVTQNT >gi|333032579|gb|GL891847.1| GENE 86 85794 - 86249 495 151 aa, chain + ## HITS:1 COG:RSc2785 KEGG:ns NR:ns ## COG: RSc2785 COG0757 # Protein_GI_number: 17547504 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Ralstonia solanacearum # 2 144 10 152 156 189 65.0 2e-48 MSSTILVIHGPNLNLLGKREPEVYGHLTLDNINQQLIAQAEQASITLDTFQSNWEGAIVD RIHQAQTEGVKLIIINPAALTHTSVALRDALLGVAIPFIEVHLSNVHAREAFRHHSYLSD KAIGVICGLGAKGYSFALDYAIEKIQPSNPN >gi|333032579|gb|GL891847.1| GENE 87 86267 - 86686 722 139 aa, chain + ## HITS:1 COG:XF0048 KEGG:ns NR:ns ## COG: XF0048 COG0511 # Protein_GI_number: 15836653 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxyl carrier protein # Organism: Xylella fastidiosa 9a5c # 1 138 1 161 161 107 45.0 6e-24 MDIRKIKKLIDLMIESDLQAIEVKEGDQSIALTRRNPVVAAAGVALPAAPVAEAPVAKTP RGAVETSPMVGVFYAAPSPGEAPFVKVGQTVSAGETLGIIEAMKIMNPIEATQSGVIEEI LVKNGEVIQFGQPLFRYRA >gi|333032579|gb|GL891847.1| GENE 88 86703 - 88073 1668 456 aa, chain + ## HITS:1 COG:PA4848 KEGG:ns NR:ns ## COG: PA4848 COG0439 # Protein_GI_number: 15600041 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Pseudomonas aeruginosa # 1 443 1 444 449 586 64.0 1e-167 MLQKVLIANRGEIALRITRACKTLGIKTVGIYSDADKDLMHLRFVDEAVCIGPGASSDSY LNIPAIITAAEITGADAIHPGYGFLSENAEFAEIVESSGFTFIGPRPEHIRLMGNKVSAI VAMKKAGVPTVPGCDHAVTIHNALAEAKEIGFPLIVKAAAGGGGRGMRIVERVDTLLESV QAAQRDAEMWFGDDTVYMERFLQKPRHVEVQVLGDGNGHAIHLYDRDCSLQRRHQKVLEE APAPNLPEQARADILQACVHACQLMQYRGAGTFEFLFEDGEFFFIEMNTRVQVEHPVTEM VTGVDIIEQQLRIAAGLGLELQQEDIEVRGHAIECRINAEDPTTFLPSPGKIESFYAPGG AGIRLDSHIYPGYSIPPYYDSMIAKLIAHGKDRETSLARMRQALDEMILTGIKTNIPLHK DLILQDKNFCSQAMDIHYLEKHLLKQVEEEKKAETA >gi|333032579|gb|GL891847.1| GENE 89 88128 - 88607 470 159 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02138 NR:ns ## KEGG: ACICU_02138 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 159 328 100.0 5e-89 MKNIYIMGLLLACSGFAMAETVTQQPTEQPVRTASNPNAIRIVTRPEIMGLWGMEIPNNK KCVEYYNFRSSNDVVIKSGEEWSYGIYEYQPSDDPKEQLSALVMQIKFDNNKVDCSGQKQ DQTGDISQYFVQWKNDHTINFCSTAKGEQCFATLRRMLP >gi|333032579|gb|GL891847.1| GENE 90 88779 - 89870 647 363 aa, chain - ## HITS:1 COG:PA1682 KEGG:ns NR:ns ## COG: PA1682 COG0477 # Protein_GI_number: 15596879 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 2 331 26 354 383 171 35.0 3e-42 MPYWNLYLQDQGFNYQEIGILSSIAIVTRFFAPLVWGWIADKSSKRMLLVRIATWMEACI WLAIFIIPNTFQSVALLMLIFSFFQNAILAQFEGVTLFWLGDQRAKLYGKIRKWGSVGFI VGVFTIGAILEIIPISMLPILLLIIASLAFIWAFTIREPEGAPTSQKHLEPLLPVLKRPE VAAFFTIEFILLFSHAPFYSFYSNFLKSLNFSTTEIGFLWAMGVVSEIVMFAYATTFFKY FSWRSLVAVCLILTSIRWLLVAIFSHYFIGQLFAQCLHAFSFGLFHLIAMRLIFQNFSIG QQGRGQAFYSTMWGLGVAFGSILAGHYWKILTGEHIFMIAALVVLFGMCFVYWLPKQIEK SVS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:50:28 2011 Seq name: gi|333032578|gb|GL891848.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld64, whole genome shotgun sequence Length of sequence - 1343 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1312 696 ## COG3436 Transposase and inactivated derivatives Predicted protein(s) >gi|333032578|gb|GL891848.1| GENE 1 2 - 1312 696 436 aa, chain + ## HITS:1 COG:ECs3866 KEGG:ns NR:ns ## COG: ECs3866 COG3436 # Protein_GI_number: 15833120 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli O157:H7 # 10 432 37 457 463 292 40.0 9e-79 LERLNADKTDAGTQKATVNKPKRRLLPDHLHTIRIEHEPASTQCACGCQLRRIGEDVSEK LHFRPAQFYKEQHVRGKWVCDQCDTLTQQAMPAYVIDKGIASPELLSHVLVSKYADHLPL YRQRLIYQRAGIELSRSTLSDWIGRCGVELEPLANALKEVVLQQRVLHADETPVTIMRMG ENNKKPKKGYVWAYATTQYNPVQAVIYDFQDSRSGQHAEEFLKGWQGYLVCDDYSGYKAR FKSGQVIEVGCMAHARRKFHELHVTGKSQVAEQALVLIQKLYAIEAELRKKTDGTAEDRR EYRQQHSQPVMQQLYEWLNQHHLIVPSSSPTAKAINYTLKRWPALSRYLDDGNLPICNNW VENQMRPWALGRKNWLFAGSLRSGQRAANIMTLIQSAKLNGLDPYAYLSDVLKRLPTHKV TQIEELLPHCWKPKSN Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:50:30 2011 Seq name: gi|333032577|gb|GL891849.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld65, whole genome shotgun sequence Length of sequence - 1874 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 43 - 585 655 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 646 - 705 7.7 2 2 Tu 1 . - CDS 758 - 904 63 ## gi|332873957|ref|ZP_08441895.1| conserved domain protein - Prom 937 - 996 3.1 3 3 Op 1 5/0.000 + CDS 934 - 1221 274 ## COG2929 Uncharacterized protein conserved in bacteria 4 3 Op 2 . + CDS 1208 - 1522 352 ## COG3514 Uncharacterized protein conserved in bacteria + Term 1526 - 1555 2.1 + Prom 1571 - 1630 5.7 5 4 Tu 1 . + CDS 1650 - 1872 216 ## p2ABAYE0008 putative TonB-dependent receptor protein Predicted protein(s) >gi|333032577|gb|GL891849.1| GENE 1 43 - 585 655 180 aa, chain - ## HITS:1 COG:CC2039 KEGG:ns NR:ns ## COG: CC2039 COG0790 # Protein_GI_number: 16126282 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Caulobacter vibrioides # 97 178 74 155 330 65 39.0 6e-11 MALGVCLSMETFAEPVFSNDLLAKAENGDTSAQLELAEIYLYGHGVDSDENQAEVWALKS AENGNVAAMFWLADGYVTYARLMEDDDKNDSLEHFQKAFKWFQKASENGHSESMVELADL YTRADSGIEVNINKAFELREKAAKLGNKKAMRSLSVMYRDGIGIPKNTDLAQSWWDKSEN >gi|333032577|gb|GL891849.1| GENE 2 758 - 904 63 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332873957|ref|ZP_08441895.1| ## NR: gi|332873957|ref|ZP_08441895.1| conserved domain protein [Acinetobacter baumannii 6014059] Putative uncharacterized protein [Acinetobacter baumannii 1656-2] conserved domain protein [Acinetobacter baumannii 6014059] # 1 48 1 48 48 78 100.0 1e-13 MYHKIVSLNQIRVIFSQNYWQEVSKLLIKKPTCFKVGFLGILGFFYFY >gi|333032577|gb|GL891849.1| GENE 3 934 - 1221 274 95 aa, chain + ## HITS:1 COG:STM4528 KEGG:ns NR:ns ## COG: STM4528 COG2929 # Protein_GI_number: 16767772 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 95 1 95 95 100 52.0 6e-22 MEQYFEWDEAKNRKNQKKHDISFETASLVFEDPLRISIQDRHTNGEERWQTIGRVKGVLM LLVAHTIFDEDDCEIIRIISARQVTKAERNKYEHG >gi|333032577|gb|GL891849.1| GENE 4 1208 - 1522 352 104 aa, chain + ## HITS:1 COG:STM4529 KEGG:ns NR:ns ## COG: STM4529 COG3514 # Protein_GI_number: 16767773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 1 99 1 96 100 79 50.0 1e-15 MSMVRYSHKELNEKFGEKQDAEIQRLLAKGTVPDDQLDLSDIPEITDWSNAVRQNQFYRP VKQQTSIRLDADVLAWFKAQGKGYQTRMNEILRDAMLKELKNHQ >gi|333032577|gb|GL891849.1| GENE 5 1650 - 1872 216 74 aa, chain + ## HITS:1 COG:no KEGG:p2ABAYE0008 NR:ns ## KEGG: p2ABAYE0008 # Name: not_defined # Def: putative TonB-dependent receptor protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 65 1 65 803 123 100.0 2e-27 MLNKSKLFLALITLGASKILLAAEGPVTTLNTIVLTAQSDELGSELLGKSLNVSNQFIDT SKLKQGEFKHEVRQ Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:50:37 2011 Seq name: gi|333032576|gb|GL891850.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld68, whole genome shotgun sequence Length of sequence - 2712 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 19 - 351 354 ## VCA0299 hypothetical protein 2 1 Op 2 . - CDS 369 - 698 216 ## p1ABSDF0002 putative mobilization protein (MobS-like) - Prom 816 - 875 3.9 + Prom 663 - 722 4.0 3 2 Tu 1 . + CDS 845 - 2281 689 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 4 3 Tu 1 . + CDS 2383 - 2574 61 ## gi|332873965|ref|ZP_08441902.1| conserved domain protein + Term 2636 - 2669 1.1 Predicted protein(s) >gi|333032576|gb|GL891850.1| GENE 1 19 - 351 354 110 aa, chain - ## HITS:1 COG:no KEGG:VCA0299 NR:ns ## KEGG: VCA0299 # Name: not_defined # Def: hypothetical protein # Organism: V.cholerae # Pathway: not_defined # 1 108 5 112 147 98 48.0 7e-20 MEDSTLNELIRNTELFFEHHWNVDLLGKPPEWSPVHFNFGKIPNYDKQGVYAFIKGDLVT YIGVGTSRGAGRYRGNGLSARVMKYCRWNEDKTEYIAIDPRLKDAGSMAE >gi|333032576|gb|GL891850.1| GENE 2 369 - 698 216 109 aa, chain - ## HITS:1 COG:no KEGG:p1ABSDF0002 NR:ns ## KEGG: p1ABSDF0002 # Name: not_defined # Def: putative mobilization protein (MobS-like) # Organism: A.baumannii_SDF # Pathway: not_defined # 25 109 15 99 99 79 64.0 5e-14 MNAYSSALMLGMVSQNDGIGLMSVTETLDSKIKAQEEKLKQLKAQRQAALARERTKEKEQ ARKDDTRRKILIGSCMLKITEDDEQARAKLIAQMDKYLTDERDRKLFNL >gi|333032576|gb|GL891850.1| GENE 3 845 - 2281 689 478 aa, chain + ## HITS:1 COG:AGl66 KEGG:ns NR:ns ## COG: AGl66 COG0507 # Protein_GI_number: 15890136 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 243 12 263 1277 147 38.0 3e-35 MAIYHFSVKTVARSAGRSATAAIAYRAGEKIYCEREGREHDYSRKTGVEYKEIYLPEGAP EHLKNREKLWNEVEQRETRKNSTVAREFEIAFPSELNQEQRLAMLEELCASIVERHQVAV DACIHAPHTGSGSDERNYHAHILMSTRKLTPEGFTEKTRELDQKHSGEIDHWREHFADIC NVHLNLAGSTARVDHRSYKDQENGLEATLHEGPKVTELRRRGIETEISRSNDEIKQRNQA QLQYDKNMDVLIAENEIKLSTLKTEQQIQIKNSAKTPPIDEKSLFEEKQRGTLGKVLKRE ISAKDANLDLDFMQRNLKQAEINLTKHHKHQNEFNQQLAQEIVKSGLKQSHDKLQSLVDQ HNELTQNKPLLFGKKAWEAQRDEIYQEHKKLKGQHEHQKKHGVKDLLENEKFKEHAWKKY QKQHPEKAKQYQTLYQSYKIVKKCVDEIKAEQQMKIRQEQQLKAQQHAPKMKSRGMSR >gi|333032576|gb|GL891850.1| GENE 4 2383 - 2574 61 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332873965|ref|ZP_08441902.1| ## NR: gi|332873965|ref|ZP_08441902.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 63 1 63 63 97 100.0 3e-19 MGANFPSLIPKSSVARKKAHERSEFRVAFDLAFAFSQIHENMNQKLPRRIERKRDSIEFE RTK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:50:48 2011 Seq name: gi|333032575|gb|GL891851.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld69, whole genome shotgun sequence Length of sequence - 5256 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 2, operones - 1 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 77 - 110 2.9 1 1 Tu 1 . - CDS 125 - 316 191 ## AB57_2699 hypothetical protein - Prom 363 - 422 3.4 - Term 322 - 348 -1.0 2 2 Op 1 . - CDS 534 - 776 197 ## AB57_2700 hypothetical protein - Prom 809 - 868 1.5 - Term 790 - 816 -0.7 3 2 Op 2 . - CDS 875 - 1267 289 ## ABAYE2721 hypothetical protein 4 2 Op 3 . - CDS 1312 - 2415 889 ## AB57_2702 phage putative head morphogenesis protein 5 2 Op 4 . - CDS 2417 - 3868 1278 ## AB57_2703 hypothetical protein 6 2 Op 5 . - CDS 3865 - 4560 514 ## COG5362 Phage-related terminase 7 2 Op 6 . - CDS 4368 - 5255 411 ## COG5410 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|333032575|gb|GL891851.1| GENE 1 125 - 316 191 63 aa, chain - ## HITS:1 COG:no KEGG:AB57_2699 NR:ns ## KEGG: AB57_2699 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 63 1 63 63 105 100.0 8e-22 MPSPIIQYFQYEHLPEHLQQVSKPIGDLARQMDEQLPDGPEKSTGLRKLLEAKDAFVRQA LSK >gi|333032575|gb|GL891851.1| GENE 2 534 - 776 197 80 aa, chain - ## HITS:1 COG:no KEGG:AB57_2700 NR:ns ## KEGG: AB57_2700 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 80 1 80 80 157 100.0 1e-37 MSESKVRHLVLKRVSDKSSHLALCDEETGIPLAGLTAVKMNCSVFEGPATITATFDVGGP QGIRLVGDEPRQKVWSAKET >gi|333032575|gb|GL891851.1| GENE 3 875 - 1267 289 130 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2721 NR:ns ## KEGG: ABAYE2721 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 130 13 142 142 223 99.0 2e-57 MKTIAFVCLTLISITCLAEPSQKYLKEYDRLSEALESAMANAYSFDPATGQVKQATQGLE AKNNLCRAAQAKLNLTTFLKDNLEESKELYKSIDGAETLDKNYLSGQQQEQQNLVSNLKK DLVGTGFNCE >gi|333032575|gb|GL891851.1| GENE 4 1312 - 2415 889 367 aa, chain - ## HITS:1 COG:no KEGG:AB57_2702 NR:ns ## KEGG: AB57_2702 # Name: not_defined # Def: phage putative head morphogenesis protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 367 1 367 367 714 100.0 0 MATDIKKLFEVLTQHQAYLYRASSKTVNELLALFNDDTSKMLSKLRDLLDELNESEKVAL AGGKYTTSNLREIRDLIAQWFASVNLALPEAFAVSATALAVYEANYVAKLYGAKINKPDG EKLFLSAKKVPLAGGALVDDLLSRIAESARQKVEYAIRDGINSGKTNQEIVQRIRGTKRL NYEDGILNGTKTDIERTVRTVRSHVANQAYLNSFNQIGFEYVRFVSVLDGRTSKLCASLD GSVWEINDPAKRVPPLHPNCRSILVPVEKDGQLVGERPFVMDERRVKDIPKEERSQLIGQ LDANTTFKEFFKKTDDFFQREWLGPKRFKLYKDGKFDFDKFFDPEGRFYSLDDLRKLDEK AFKKLGL >gi|333032575|gb|GL891851.1| GENE 5 2417 - 3868 1278 483 aa, chain - ## HITS:1 COG:no KEGG:AB57_2703 NR:ns ## KEGG: AB57_2703 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 483 1 483 483 935 99.0 0 MSDVTFQHAEYVKNLPYWQKLDDVCEGEDAVKAKGEKYLPMPNAHDKSPANKSAYEAYLT RAVFYEVTGTTLNSLVGAAFATDPSFKFPPELAHLERNANGAGLSTYQLAQNGIRHLLKH YRCALYVDYPDVPPARNLAEFKAQKAYPMIHLLNALDVVNWDSVMIDNQKKLCLVVIREF KSERGADGFSKTEQEQYRVLRLEQEGNGEYIYSVQVYTKGEKGNWVGGEKKFPTDYNGNF WTYIPFTFVGAIDNSEEIKKPPLLPLANLNLAHYRDSADFQESVFYMGQPQYYAKGVNWE WYDQAKKRGIYIGAKVLLPLPENGGLGIVQADPNTLAREAMKDKWEKMKEMGARLIEKGS GSKKTATEANSDDAVQHSVLSLCVVNMNEALSAALRWAAKFVTPNVDVLTKDDLMFEISQ EFNKQGYLAELARQLFEAALQGRSSFKSWWEYNQTGMFPKQKYEEELQNVEAEQDGTLNQ KVE >gi|333032575|gb|GL891851.1| GENE 6 3865 - 4560 514 231 aa, chain - ## HITS:1 COG:mlr8003_2 KEGG:ns NR:ns ## COG: mlr8003_2 COG5362 # Protein_GI_number: 13476623 # Func_class: R General function prediction only # Function: Phage-related terminase # Organism: Mesorhizobium loti # 44 216 4 179 190 131 41.0 1e-30 MSFSYSGRRIRTVASKTQYPKIEANGASSTICICRAVPTNAITAAGGFFKPDNIQIVDAL PADVVKQVRAWDFGATENEGDFTVGVREALGADGFTYIVDVTRGQLGPDNVNKRLEQTAK IDGKKVSVRLPQDPGQAGKSQASSFVKLLAGYSVIAKPISGDKLTRAQPFAAQVNVGNVR MLKGEWNKDFIDELRHFPNGTHDDQVDAASDAFNELHEGFEAFFADMGFAR >gi|333032575|gb|GL891851.1| GENE 7 4368 - 5255 411 295 aa, chain - ## HITS:1 COG:XF1569 KEGG:ns NR:ns ## COG: XF1569 COG5410 # Protein_GI_number: 15838170 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 4 275 19 307 316 196 39.0 4e-50 IEAQEDLYFFTRYMFKERRGYKWMQNWHHLEICEALMKVYRGEIKRLIINVPPRYSKTEI AVINFMAWCFGKNPDCEFIHISYSAMLAANNAFQIRTLVQEEAYRKVFPELTLRDDSKAK DFWRTSQGGVCYATGTGGTITGFGAGKLRKGFGGCIIIDDPHKAHEASSKTIREGVIDWF QNTLESRTNSPDTPIIVIMQRLHEDDLAGWLLGDRKDGVPVAGGNGEVWEHLCLSAIQED GSALWPAKHNIQKLRLMEQAAPYVFAGQYRQMPSPQQAVFLSPTIFKLLMLCLRM Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:51:42 2011 Seq name: gi|333032574|gb|GL891852.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld70, whole genome shotgun sequence Length of sequence - 113211 bp Number of predicted genes - 107, with homology - 105 Number of transcription units - 48, operones - 22 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 83 - 142 7.5 1 1 Tu 1 . + CDS 191 - 1090 920 ## COG2853 Surface lipoprotein + Term 1103 - 1155 7.6 + Prom 1115 - 1174 3.7 2 2 Op 1 9/0.000 + CDS 1206 - 2174 930 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit + Prom 2193 - 2252 3.8 3 2 Op 2 . + CDS 2277 - 2798 335 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 4 2 Op 3 . + CDS 2825 - 3649 672 ## COG0388 Predicted amidohydrolase 5 2 Op 4 . + CDS 3664 - 4041 402 ## ABBFA_002942 hypothetical protein + Term 4067 - 4106 2.9 + Prom 4057 - 4116 6.1 6 3 Op 1 5/0.062 + CDS 4202 - 4639 306 ## COG1846 Transcriptional regulators + Prom 4645 - 4704 11.3 7 3 Op 2 . + CDS 4727 - 5158 758 ## COG1764 Predicted redox protein, regulator of disulfide bond formation + Term 5160 - 5224 12.8 - Term 5146 - 5212 13.2 8 4 Tu 1 . - CDS 5213 - 6703 1779 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 6783 - 6842 4.5 + Prom 6664 - 6723 7.3 9 5 Op 1 . + CDS 6800 - 7621 800 ## ABBFA_002946 hypothetical protein 10 5 Op 2 . + CDS 7631 - 8548 878 ## COG0668 Small-conductance mechanosensitive channel 11 6 Tu 1 . - CDS 8538 - 11321 2279 ## COG5373 Predicted membrane protein - Prom 11372 - 11431 4.6 + Prom 11418 - 11477 5.3 12 7 Tu 1 . + CDS 11500 - 14271 3246 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains + Term 14295 - 14323 2.3 - Term 14272 - 14319 6.1 13 8 Op 1 3/0.062 - CDS 14331 - 14900 604 ## COG0762 Predicted integral membrane protein 14 8 Op 2 . - CDS 14922 - 15752 1067 ## COG0345 Pyrroline-5-carboxylate reductase 15 8 Op 3 3/0.062 - CDS 15730 - 16986 1133 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 16 8 Op 4 . - CDS 17070 - 17891 957 ## COG0825 Acetyl-CoA carboxylase alpha subunit 17 8 Op 5 . - CDS 17910 - 19430 1529 ## COG0248 Exopolyphosphatase - Prom 19597 - 19656 4.6 + Prom 19475 - 19534 5.1 18 9 Tu 1 . + CDS 19710 - 20036 418 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Term 20054 - 20096 4.8 + Prom 20074 - 20133 5.3 19 10 Tu 1 . + CDS 20358 - 21626 1540 ## COG1158 Transcription termination factor + Term 21648 - 21679 3.2 20 11 Tu 1 . + CDS 22041 - 22286 386 ## + Term 22300 - 22354 10.5 - Term 22298 - 22328 2.0 21 12 Op 1 13/0.000 - CDS 22456 - 22752 278 ## PROTEIN SUPPORTED gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 22 12 Op 2 40/0.000 - CDS 22749 - 25130 2733 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 23 12 Op 3 . - CDS 25164 - 26144 1101 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 26168 - 26227 4.8 + Prom 26007 - 26066 3.5 24 13 Tu 1 . + CDS 26287 - 27303 899 ## ACICU_00604 hypothetical protein 25 14 Op 1 . - CDS 27310 - 27813 436 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 26 14 Op 2 . - CDS 27872 - 28429 584 ## COG3236 Uncharacterized protein conserved in bacteria - Prom 28450 - 28509 5.5 - Term 28455 - 28517 9.6 27 15 Op 1 . - CDS 28520 - 28879 588 ## PROTEIN SUPPORTED gi|50086059|ref|YP_047569.1| 50S ribosomal protein L20 28 15 Op 2 . - CDS 28891 - 29085 324 ## PROTEIN SUPPORTED gi|169634337|ref|YP_001708073.1| 50S ribosomal protein L35 - Prom 29174 - 29233 8.3 + Prom 29148 - 29207 6.1 29 16 Tu 1 . + CDS 29334 - 30584 1115 ## COG0477 Permeases of the major facilitator superfamily + Term 30596 - 30633 -0.4 30 17 Op 1 . - CDS 30624 - 31052 295 ## COG1238 Predicted membrane protein 31 17 Op 2 . - CDS 31105 - 31725 742 ## COG0625 Glutathione S-transferase - Prom 31819 - 31878 3.7 - Term 31889 - 31918 2.1 32 18 Op 1 16/0.000 - CDS 31931 - 32428 526 ## PROTEIN SUPPORTED gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 33 18 Op 2 . - CDS 32488 - 34410 2366 ## COG0441 Threonyl-tRNA synthetase - Prom 34479 - 34538 9.0 + Prom 34644 - 34703 5.3 34 19 Tu 1 . + CDS 34822 - 36450 1725 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II + Term 36475 - 36507 3.0 - Term 36456 - 36502 6.1 35 20 Op 1 . - CDS 36512 - 37048 711 ## COG3028 Uncharacterized protein conserved in bacteria 36 20 Op 2 7/0.000 - CDS 37051 - 37362 261 ## COG1925 Phosphotransferase system, HPr-related proteins 37 20 Op 3 . - CDS 37317 - 38168 626 ## COG1660 Predicted P-loop-containing kinase 38 20 Op 4 19/0.000 - CDS 38191 - 39039 979 ## COG0414 Panthothenate synthetase 39 20 Op 5 4/0.062 - CDS 39043 - 39852 1125 ## COG0413 Ketopantoate hydroxymethyltransferase 40 20 Op 6 7/0.000 - CDS 39898 - 40404 224 ## PROTEIN SUPPORTED gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 41 20 Op 7 . - CDS 40377 - 41840 1451 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 41880 - 41939 5.2 42 21 Op 1 . - CDS 41965 - 42375 311 ## COG1555 DNA uptake protein and related DNA-binding proteins 43 21 Op 2 . - CDS 42344 - 43150 732 ## COG1694 Predicted pyrophosphatase - Prom 43175 - 43234 5.5 + Prom 43139 - 43198 5.7 44 22 Tu 1 . + CDS 43262 - 44035 616 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 44040 - 44085 9.1 - Term 44021 - 44078 5.1 45 23 Op 1 8/0.000 - CDS 44080 - 46386 2372 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 46 23 Op 2 . - CDS 46417 - 47808 925 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 47 23 Op 3 . - CDS 47818 - 48636 827 ## COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 48 23 Op 4 . - CDS 48659 - 49573 487 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 49594 - 49653 4.8 + Prom 49648 - 49707 4.7 49 24 Op 1 . + CDS 49746 - 52553 2716 ## COG0642 Signal transduction histidine kinase + Prom 52564 - 52623 3.9 50 24 Op 2 3/0.062 + CDS 52650 - 53438 970 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 51 24 Op 3 8/0.000 + CDS 53449 - 54315 975 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 52 24 Op 4 . + CDS 54332 - 55126 886 ## COG3622 Hydroxypyruvate isomerase 53 24 Op 5 . + CDS 55208 - 55609 521 ## COG0799 Uncharacterized homolog of plant Iojap protein + Term 55621 - 55664 4.1 + Prom 55628 - 55687 7.2 54 25 Tu 1 . + CDS 55861 - 56682 874 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 56701 - 56727 -1.0 - Term 56682 - 56722 5.1 55 26 Op 1 17/0.000 - CDS 56735 - 58189 1849 ## COG1282 NAD/NADP transhydrogenase beta subunit 56 26 Op 2 10/0.000 - CDS 58202 - 58516 381 ## COG3288 NAD/NADP transhydrogenase alpha subunit 57 26 Op 3 . - CDS 58528 - 59655 1447 ## COG3288 NAD/NADP transhydrogenase alpha subunit - Prom 59754 - 59813 7.6 + Prom 59788 - 59847 7.0 58 27 Op 1 1/0.125 + CDS 59895 - 60821 455 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 59 27 Op 2 2/0.062 + CDS 60889 - 61296 472 ## COG0251 Putative translation initiation inhibitor, yjgF family 60 27 Op 3 . + CDS 61315 - 62499 1206 ## COG0477 Permeases of the major facilitator superfamily + Prom 62553 - 62612 6.1 61 28 Tu 1 . + CDS 62648 - 63652 1059 ## COG0042 tRNA-dihydrouridine synthase + Term 63659 - 63700 -1.0 + Prom 63755 - 63814 8.8 62 29 Tu 1 . + CDS 63988 - 64497 472 ## ABBFA_002998 hypothetical protein + Term 64519 - 64574 0.8 63 30 Tu 1 . - CDS 64505 - 65398 628 ## COG0583 Transcriptional regulator - Prom 65459 - 65518 5.3 - Term 65633 - 65670 6.2 64 31 Op 1 . - CDS 65686 - 66450 753 ## COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 - Prom 66477 - 66536 6.0 - Term 66524 - 66566 3.1 65 31 Op 2 . - CDS 66575 - 67048 415 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 67068 - 67127 13.1 - Term 67101 - 67145 9.1 66 32 Tu 1 . - CDS 67169 - 69925 3088 ## COG1048 Aconitase A - Prom 69958 - 70017 2.4 67 33 Op 1 . - CDS 70050 - 70862 665 ## COG0084 Mg-dependent DNase 68 33 Op 2 . - CDS 70862 - 71803 955 ## ACICU_00560 hypothetical protein - Term 71819 - 71858 0.2 69 33 Op 3 . - CDS 71891 - 72733 815 ## ACICU_00559 hypothetical protein - Term 72754 - 72784 1.2 70 33 Op 4 . - CDS 72803 - 74395 1850 ## COG4108 Peptide chain release factor RF-3 - Prom 74456 - 74515 5.7 - Term 74543 - 74576 1.0 71 34 Tu 1 . - CDS 74600 - 75463 721 ## ACICU_00557 hypothetical protein - Prom 75486 - 75545 2.6 72 35 Tu 1 . + CDS 75779 - 76366 526 ## COG1309 Transcriptional regulator + Term 76486 - 76536 6.1 73 36 Tu 1 . - CDS 76584 - 77147 374 ## ACICU_00555 TetR family transcriptional regulator - Prom 77183 - 77242 3.7 74 37 Tu 1 . + CDS 77554 - 77628 78 ## + Term 77695 - 77739 -0.9 - Term 77466 - 77513 11.1 75 38 Tu 1 . - CDS 77752 - 79806 1728 ## COG2200 FOG: EAL domain - Term 80073 - 80117 6.2 76 39 Op 1 15/0.000 - CDS 80137 - 81153 1310 ## COG0059 Ketol-acid reductoisomerase 77 39 Op 2 32/0.000 - CDS 81186 - 81677 767 ## COG0440 Acetolactate synthase, small (regulatory) subunit 78 39 Op 3 . - CDS 81677 - 83401 1762 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 83424 - 83483 4.5 + Prom 83798 - 83857 6.9 79 40 Tu 1 . + CDS 83906 - 84235 193 ## ABSDF2979 hypothetical protein + Term 84243 - 84284 3.5 + Prom 84281 - 84340 4.7 80 41 Op 1 . + CDS 84422 - 87046 3026 ## COG0495 Leucyl-tRNA synthetase 81 41 Op 2 . + CDS 87074 - 87583 722 ## A1S_0540 putative minor lipoprotein 82 41 Op 3 . + CDS 87603 - 88592 864 ## COG1466 DNA polymerase III, delta subunit + Prom 88615 - 88674 7.7 83 42 Op 1 13/0.000 + CDS 88700 - 90040 1459 ## COG0845 Membrane-fusion protein 84 42 Op 2 3/0.062 + CDS 90043 - 92037 1882 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 85 42 Op 3 . + CDS 92048 - 93454 407 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 93466 - 93514 7.7 - Term 93460 - 93494 4.0 86 43 Tu 1 . - CDS 93524 - 94327 1073 ## COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) - Prom 94382 - 94441 3.3 - Term 94413 - 94446 2.1 87 44 Tu 1 . - CDS 94464 - 95195 778 ## COG4760 Predicted membrane protein - Prom 95227 - 95286 7.7 - Term 95293 - 95330 5.5 88 45 Tu 1 . - CDS 95351 - 95917 618 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) - Prom 96094 - 96153 2.6 + Prom 95931 - 95990 2.5 89 46 Tu 1 . + CDS 96043 - 97101 1214 ## COG1162 Predicted GTPases + Prom 97115 - 97174 7.4 90 47 Op 1 7/0.000 + CDS 97199 - 97615 372 ## COG0607 Rhodanese-related sulfurtransferase 91 47 Op 2 9/0.000 + CDS 97627 - 97884 370 ## COG0695 Glutaredoxin and related proteins 92 47 Op 3 . + CDS 97912 - 98370 598 ## COG1952 Preprotein translocase subunit SecB + Term 98399 - 98425 -0.7 - Term 98379 - 98422 2.1 93 48 Op 1 . - CDS 98439 - 99095 618 ## COG2091 Phosphopantetheinyl transferase 94 48 Op 2 . - CDS 99120 - 99554 485 ## ACICU_00535 hypothetical protein 95 48 Op 3 11/0.000 - CDS 99566 - 100792 1202 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 96 48 Op 4 4/0.062 - CDS 100792 - 101517 205 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 97 48 Op 5 3/0.062 - CDS 101541 - 101966 466 ## COG4706 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase 98 48 Op 6 . - CDS 101966 - 103168 1240 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase 99 48 Op 7 . - CDS 103165 - 103710 453 ## ACICU_00530 hypothetical protein 100 48 Op 8 . - CDS 103713 - 105008 1384 ## COG0644 Dehydrogenases (flavoproteins) 101 48 Op 9 . - CDS 105038 - 107353 1542 ## COG4258 Predicted exporter 102 48 Op 10 . - CDS 107328 - 107957 552 ## ACICU_00527 hypothetical protein 103 48 Op 11 1/0.125 - CDS 107957 - 108385 417 ## COG0824 Predicted thioesterase 104 48 Op 12 1/0.125 - CDS 108395 - 109930 1852 ## COG2986 Histidine ammonia-lyase 105 48 Op 13 . - CDS 109932 - 110807 599 ## COG4261 Predicted acyltransferase 106 48 Op 14 1/0.125 - CDS 110861 - 111601 630 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 107 48 Op 15 . - CDS 111604 - 113211 1196 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases Predicted protein(s) >gi|333032574|gb|GL891852.1| GENE 1 191 - 1090 920 299 aa, chain + ## HITS:1 COG:PA2800 KEGG:ns NR:ns ## COG: PA2800 COG2853 # Protein_GI_number: 15597996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Surface lipoprotein # Organism: Pseudomonas aeruginosa # 76 277 34 232 234 146 41.0 6e-35 MNYSNLLLSSLLTVGLYTSAHAQENLTEESAASSEDVTSTQTQHSRPHLQIIKDLKGIKV KDLKINANAAQPDTVKDPLQSLNRPIYSFNDMLDRHVLRPVAVEYREKTPEDVRGSYRQF RKNLGEPWNAVNQLIQGRPGRAAKTLGRFTINTLTTLGLADPASRLGLPPEEESFGVTLG YYGVPSGPFLMLPFFGPSTLRDGVGLAVDAQARPQKYIMDDQDGLYWSTNLLQAVDTRAQ YLDLDQTIQGDQYAMIRDLYLQRKAFQIAEKKGDSADVSFIDDDESEDVPEDNTDKTEK >gi|333032574|gb|GL891852.1| GENE 2 1206 - 2174 930 322 aa, chain + ## HITS:1 COG:PA2798_2 KEGG:ns NR:ns ## COG: PA2798_2 COG2208 # Protein_GI_number: 15597994 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Pseudomonas aeruginosa # 137 286 10 170 219 95 32.0 8e-20 MYFIKPTRSIPFVEQALEALPDLQVIHIDDLDLYDPTIIAIADVQDFLTYKWRLPTIVIA FEHEGSALAQAWEAGALAGWVWNQLPKDLNKALTRIDAQYKRNQDSRDLPSAAELQKRLL PNPIDLLNYEVETFFQPSAYLSGDWYDYWKLNDKEVLFYLADVSGHGVTSSLLTSWMAAF HGRSKTPRQLIKKLNGMLVQENIEKHITIVVGILNLETHSLRWSSAGHYPPPIIFEPNQP PKILTTSSFPLGLTDELEVEEHVCTLNRHARFIICSDGALEPFDGGLNDQFQQLVQHLQN QSFQAPDHVADDIAIFSLCRMN >gi|333032574|gb|GL891852.1| GENE 3 2277 - 2798 335 173 aa, chain + ## HITS:1 COG:PA2797 KEGG:ns NR:ns ## COG: PA2797 COG1366 # Protein_GI_number: 15597993 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Pseudomonas aeruginosa # 1 159 1 159 160 108 38.0 6e-24 MSTGHVEYASLNGTHIFKLIGEVRAHSCISLDKLLNRIEQQENVVGAIVDLTQTTFIDST VLGILAKLGLKLKQTHHIQAVMLSTNPDITTLANSMGLGQVFVILNYCGDPNVCTLTLND EHITHNAMLRTVLDAHKTLMKLNANNQNMFEPLVKQLQKEQDTLEQVSDKQNA >gi|333032574|gb|GL891852.1| GENE 4 2825 - 3649 672 274 aa, chain + ## HITS:1 COG:PA4475 KEGG:ns NR:ns ## COG: PA4475 COG0388 # Protein_GI_number: 15599671 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Pseudomonas aeruginosa # 4 271 3 270 282 213 44.0 4e-55 MTLVSVVQMNSQDDIESNFQVIESLIQQSKAQNASLIVFPENFVCFAAGKQRETAEQFES IQQRLEKLAHQYQIWIVAGTLPCPFRPDGSIIQDGRVRTVSLCISPERTEARYDKIHLFD VQVGDAVGGYQESRFFEPGTDVVVTSTPFGNIGLMVCYDLRFPELALTLRQQGAHLLTAP AAFTYTTGQMHWQLLLQARAMDSQCYVLGAAQQGWHGEKRQTWGHAGATDSRGQVLSMIG YEGNGLITVPFDLAAQELVRTSMPLMMHRKLIHY >gi|333032574|gb|GL891852.1| GENE 5 3664 - 4041 402 125 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002942 NR:ns ## KEGG: ABBFA_002942 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 125 1 125 125 254 100.0 8e-67 MWKYLFSIFCLGANIHCYATDFGTTNNFVSPNLQLKQNVLPPTPKNIPLPAFGQRIIGWG TGAEGARQRLENIQPADVSMIKKQGTTLEMITAWQDFYEQEQQRNENNPTAKYRARLMKK IADLW >gi|333032574|gb|GL891852.1| GENE 6 4202 - 4639 306 145 aa, chain + ## HITS:1 COG:RSp1106 KEGG:ns NR:ns ## COG: RSp1106 COG1846 # Protein_GI_number: 17549327 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 7 145 12 150 153 156 56.0 1e-38 MDQDCQNLKLENQLCFLIYSTNLALNQLYRKLLTPLGITYPQYLVMLVLWEKDEITVSEI GSKLFLESSTLTPILKKLEALQLLNRTRSKEDERQVIITLSEKGKKLKEQAVNIPKHILE ASSCDTATLLGLKDQLTQLRTNIAK >gi|333032574|gb|GL891852.1| GENE 7 4727 - 5158 758 143 aa, chain + ## HITS:1 COG:RSp1107 KEGG:ns NR:ns ## COG: RSp1107 COG1764 # Protein_GI_number: 17549328 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Ralstonia solanacearum # 1 141 1 141 141 187 66.0 6e-48 MSLEKVVYRAKAKATGGRDGRATSSDGVLDVQLGVPKEMGGAGGAVTNPEQLFAAGYSAC FLGALKFVANRDKFNISKDAYVEGEVGIGPIPTGFSIEVTLNVYLIGMDREEAEKLVAAA HIVCPYSNATRNNIDVTFNIVTE >gi|333032574|gb|GL891852.1| GENE 8 5213 - 6703 1779 496 aa, chain - ## HITS:1 COG:PA3103 KEGG:ns NR:ns ## COG: PA3103 COG2804 # Protein_GI_number: 15598299 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Pseudomonas aeruginosa # 11 492 21 501 502 582 65.0 1e-166 MQILKQIQVPYSFAKRHGVLFRYDGDQVFIVRRQNTEKIALQEARRILGKPAHYQLCTEQ EFNSLLSTSYAGDTGESQQVAAGLEDHPDLLSLADQVPETEDLMDQEDDAPIVRLINALL SEAIRVGASDIHIEAFEKKLSVRLRVDGQLREIVQPRRELAPLLVSRIKVMAKLDIAEKR VPQDGRISLRLAGREVDVRVSTLPSSHGERVVMRLLDKQAGRLNMTHLGLMANDYERLTQ LVHRPHGIILVTGPTGSGKTTTLYAALSDLNDNTRNILTAEDPIEYQLEGIGQTQVNTKV DMTFARALKAMLRQDPDVVMVGEIRDLETAEIAVQASLTGHLVLSTLHTNTAIGAVTRLK DMGIEPFLLSSSLIGVVAQRLVRTLCPHCMTWREADTFEKQVFQHIFHEPSLKLPEAQGC DQCSHLGFNGRTAIYEIVPIDEPMRRLIHGNAAEFELENHARQYSGSIRDDGLRKVLSGK TTLEEVLRVTNEASEA >gi|333032574|gb|GL891852.1| GENE 9 6800 - 7621 800 273 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002946 NR:ns ## KEGG: ABBFA_002946 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 273 1 273 273 551 100.0 1e-156 MFENNEYQPHPQNSLKWWGEQHFEINQSKAWQFGSMLFRLTRGIKEWRIEYYRPTLQDDN EQDWHIITDANFGFPHSVQVERYMFRKTNPKFLLMPRLADRSVVIKPVDPIYIPAGQRGT LYISTPLWIAGLVESQHEPLFEIPVIQPKDTWFGPNAQQGEICYATSVDGRTDLNLLTPR AFRAVTPIDFHNTSNHQLRFDRMNVPVTALPLFYSESTGRLWTSQIKVYYEGSDRPARIR IENRTPPLAGEVTYVHPPRSPGGALFNMFDSFF >gi|333032574|gb|GL891852.1| GENE 10 7631 - 8548 878 305 aa, chain + ## HITS:1 COG:TP0822 KEGG:ns NR:ns ## COG: TP0822 COG0668 # Protein_GI_number: 15639808 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Treponema pallidum # 72 273 87 283 301 144 40.0 2e-34 MADSSIPKDIADSLKSIFTNINTERISEILVGVVLCFIGFVLARIISNTFIRTVGSRFNA HQRLVWRRGIFYFIFLLFIMTSLKEAGFKLSVFLGAAGILTVALGFASQTSASNLISGLF LIGEGSFEVGDTIQITLIRGNTIEGEVISIDLLSVKLLTLDNVYIRLPNEQLIRAPVHNL SKYPIRRIPITLAINFHEDIIKVREVLLNVAANYPLVLDDPKPAVTVTAFRESSIELLFA MWCRQENSLKVRDEMQERIRNGFLDNQIEIPVPKMGLIDRPSTAFAEDDIDQYSNQKELK REPKA >gi|333032574|gb|GL891852.1| GENE 11 8538 - 11321 2279 927 aa, chain - ## HITS:1 COG:RSc0786 KEGG:ns NR:ns ## COG: RSc0786 COG5373 # Protein_GI_number: 17545505 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 173 509 161 487 938 128 27.0 6e-29 MIIVLIALTLFLAISIGFKFQSAVVALSIAFTVILVQSLSSLHQRLTHLEQQFSHQTTPL YSIHMQRTVIYTAALVALVAYINHWMWIAGGALLVLLLCLIQTISAFHTRLLFLETAKQT VNVNESIHTEVITPVLGQVDPNNITEPALPGTIALNQEKQTVRTQTTAWWQPAVDWMIHG NPILRVAVAVLMVGVVLLLRFASEHWQLSLGVKLGFIAIAGGVLTAFGYTLQKKNQLFAV ALQGVGLAVVFLTLVFSHHFGVITSLTTASILFTILLAITVFLSLKQQAIYLAILALGMA YAAPLVIPQYRPDVVFLFSYYLVINLAVAAVNFIQPWKILNQIAFFATMFIGGSAIVFYA EPAKFDTLDWILWLHIALFIWLSVRYSQNISRVSEHEKQEGIRLPPLLDVGLIFSVPVLG FTLHAYLVHESTQALTIGAAVLAGIYAVLTFWIKKTHPQLSVLAKSFFILAVAFFALIFP LAKGAHWTAIGWVAQGTALIVWGVTERYRLSRYIGVILVLLSSLALFYQVWANEEFPTLS TSIYAIAQFISAFYLLQYNSKEQRYFSASLFSGIFLCLGMYAGAVAGVEIMAWHHHALSP YLMFAIALIAIFSAIVHYKLRVQWQSLQLILISLLLLLVLGEAFASQVFTLFKWVDSLQQ TTFLVSTIILSGLFIMAQPQSSHLGYVKVWAGLSWLALAIVGVAIFPKMPIVALAFVPVI YSLWAYKTHKTTLLHQIPVWCLSLSWLLVVSVDVHSAEYLYFVPLFNLTDFLSIVVFAGL LFIIYQHAFDQDKSLEWTFKITTILVGLLVFSSVVVRGLHHYWATPLWSASIWTNGVVQL SLTLLWVILAFVLTTYSSRKMIRQLWFVGAALLGIVVLKLILLDLSQSATLTRVISFIGA GGVMLIIAYLAPLPPSSSVQKNQEPKL >gi|333032574|gb|GL891852.1| GENE 12 11500 - 14271 3246 923 aa, chain + ## HITS:1 COG:PA5493_2 KEGG:ns NR:ns ## COG: PA5493_2 COG0749 # Protein_GI_number: 15600686 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Pseudomonas aeruginosa # 328 923 1 603 603 630 54.0 1e-180 MPPFVLVDGSYFLFRAYHALPPLTTSTGLHTNAIRGAISAIQKLMRRMQPTHMAVIFDTP EPTFRHKLSPIYKGDRPTMPEELSQQIPYLHALIKAQGIPLYSLPGAEADDIIGTLAKRA VKEGHHVLISTGDKDMAQLVNDYVKLEDSFKDRVLDTDGVFEKFGVWPNQIIDYLTLMGD ASDGIMGVPGVGAKTAAKLLTEYGTLDNIIANVDQLKGKLSQNIKDNLDNIKLDHQLASI VCDLPLELDWHELKLTDPNVDALRNLYTELEFRNQLQSLDHPNNPNSSSYKQQASQTIVQ NEVKPAQTIETEDQASLTSQDDQLGTANYHTVLTQEAWDQLWQRMQNADHFAIDTETTSL DYRIAEMVGFSIAFDAKDAYYVPLAHNYENAPQQLDREQVLAQIKPILENEAVKKIGHHL KYDAHIFANHGIELKGWYFDSMLASYVLNAAATRHGMDDVARVYLSHLTTTFEQIAGKGA KQKTFNQIEIEVAAHYAAEDAHVTYRLYEVLSNKLKAHPELENILYNIEMPVARILSGME EDGIRLDHAFLDKLSVEFAKTMEDLENQAMEIAGETFNIASPKQVGEILFDKLGIKGGKK TATGQYSTSESVLEKIEHPLTEIILEHRGLAKLKSTYTDRLIEQSHNDTHRVHTSYHQAL TATGRLSSSDPNLQNIPIRRQIGRQIRKAFIAPEGRVLLAADYSQIELRLMAHFSQDDAL VHAFQHGQDVHRRTAAEVLGIAIEDVTNDQRRQAKAVNFGLLYGMSEFGLIRQLGFTREE SQNYIKQYFQRYPGIYEYMQRTRQVASEQGFVETILGRRLYTPDIDARNVMVRKAAERAA INAPLQGSAADIIKLAMIEVDKILPKDQAKLLLQVHDELVFEVDSNIADELSKQIADVMQ SVLEISVPLVVEVGQGKNWDDAH >gi|333032574|gb|GL891852.1| GENE 13 14331 - 14900 604 189 aa, chain - ## HITS:1 COG:PA0392 KEGG:ns NR:ns ## COG: PA0392 COG0762 # Protein_GI_number: 15595589 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Pseudomonas aeruginosa # 1 178 2 179 197 67 34.0 1e-11 MGANSALIFGILINVAILLVFFRFLMQLAAVSPYNPVVLSTVKATKIVDIFGRIFPTVAK GRFNLAALVLLIILYLLKIFGVMYLSGSMPNSPVHLVILTFVTMIQDLIRFCRYLIFATI ILSWVVMFTQSRSPYIEVIQDLAEPLLAPFRRLLPNMGMIDLSPILAFLALYIAEILMNE VAKVLLTGL >gi|333032574|gb|GL891852.1| GENE 14 14922 - 15752 1067 276 aa, chain - ## HITS:1 COG:PA0393 KEGG:ns NR:ns ## COG: PA0393 COG0345 # Protein_GI_number: 15595590 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Pseudomonas aeruginosa # 9 271 6 271 273 213 50.0 3e-55 MATAVNCNICFIGGGNMAQALIGGLISRGLPPTRITVSDPVEQIRQLLQEKEVHVTQDNT AAIQNADVVVLAVKPQVLANVLRPLKGLLSDKLVISIIAGAEIKTISNLIDSERIVRVMP NTPALVQTGAHGIYATDVVGASDRELTSQILAATGLTIWVNSEAQIDAVTAVSGSGPAYF FYLMESMIRAGKNLGLDEKVATALTLQTALGAAQMAITSSNTPSELRKNVTSPNGTTQAA LEVFDRAQISQNIQSALAAAQKRSQELAQELSDSAK >gi|333032574|gb|GL891852.1| GENE 15 15730 - 16986 1133 418 aa, chain - ## HITS:1 COG:mesJ KEGG:ns NR:ns ## COG: mesJ COG0037 # Protein_GI_number: 16128181 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Escherichia coli K12 # 9 379 44 413 432 146 29.0 8e-35 MAQIFPQKIRAIYIDHQLQDQSAEWAEVVATQATILNIPYIIQKVQIANGNLEAQARQAR YQAYQQHLQENEILLLAHHQQDQAETVILRLLSGAGVDGLAAMQAIDYRKDMTIWRPFLD LTREQIALWTAQLEVKYIDDPMNYDTHYDRVWCREALWPFLTSRFPKMQQALSRTSYLMQ DASEVLEEVLKDDWQYSGSADYLDLTKLSELSFARQRQLLSAWMKGQGQYRPAFEMVERL RTEVIESKSDAQAALHWNQFYYVRYQNILYRLSKQIYFAETLNPVDAELEHSFKLEERWQ GAAGLFHVECKKIGLSHSLLNKKLKIIRRQGGEKIHLYGRVGQWPLKKAIQEAHILPWLR HTIQILVLDNVMLGVFTPKGFWLAQSPYCEEGGWQPDLISHSCNLVNGEYSYGNSSEL >gi|333032574|gb|GL891852.1| GENE 16 17070 - 17891 957 273 aa, chain - ## HITS:1 COG:PM0292 KEGG:ns NR:ns ## COG: PM0292 COG0825 # Protein_GI_number: 15602157 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase alpha subunit # Organism: Pasteurella multocida # 9 265 58 315 317 320 61.0 1e-87 MKKATQSKAWTTVQIARHPERPQFLDYVGEIFTEFDALHGDRLFGDDGAMVGGLARFDGQ PVMVIGQHRGRSTREKLKHNFGMCNPEGYRKSQRLLDMAERFNLPVFTFIDTMGAYPGVG AEERGQAEAIATSLAQLSSLKVPVIATVLGEGGSGGALGIGVADRVIMLSHSIYSVISPE GCASILWKTAEKAAQASEALGLTADKLQSLGIVEYVVDEGEGAHLDPERVMQNLKVVLKQ ALDELLPMDANERCEARYQRLMKFGSENLGVAS >gi|333032574|gb|GL891852.1| GENE 17 17910 - 19430 1529 506 aa, chain - ## HITS:1 COG:PA5241 KEGG:ns NR:ns ## COG: PA5241 COG0248 # Protein_GI_number: 15600434 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Pseudomonas aeruginosa # 10 500 16 506 506 432 48.0 1e-121 MSDFLIDEELLAAIDMGSNSFHLAIARVDHGEVKKVASMSEKVQLAAGLDENKNLTEAAQ QRGLACLARFVGRLGSVQPNRLRIVATNALRQAKNGHEFIQKAAEILPKPIEIIAGREEA RLIYLGVSHTMANGGRRLVVDIGGGSTEFIIGEEFEPIYTESLQMGCVAYTKAYFADGEI TQKAFDKAVVAARKELSAIATTYKMEGWDTVVGSSGTIKACRQIMVNMGLSDEQENVTRE GLHKLKDKLLKFKNISEIDFEGLREDRRAVLPAGLAILYAVFEVLEIERLAYSDGALREG VMYDLLGRFKHEDIRDRSVQALMGRYNADPKQAERVVNTAQYLFDSVAKPLNLTSEDSDL LRRAAYLHEIGLAISHGGYHRHGAYLLQHSDIPGFSQIDQNHLSHLVAHHRRKLRNDVKN EVLKAGGHKLVYLSLLLRLAVLLNHSRSDQMLPAIELTIINDQQWQLSVSGDAKQWPLLV ADLHDEQEQFKHWDIELNIQSEKFID >gi|333032574|gb|GL891852.1| GENE 18 19710 - 20036 418 108 aa, chain + ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 1 108 19 126 127 125 50.0 2e-29 MSATIVNTTDDNFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSSEYAGKVKIVKVD VTSCEETAVKYNIRNIPALLLFKNGEVVAQQIGAVPRSKLVSFIDENV >gi|333032574|gb|GL891852.1| GENE 19 20358 - 21626 1540 422 aa, chain + ## HITS:1 COG:PA5239 KEGG:ns NR:ns ## COG: PA5239 COG1158 # Protein_GI_number: 15600432 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Pseudomonas aeruginosa # 1 419 1 419 419 678 81.0 0 MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDEAPARHV QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI KKSGTRREERLMDEDKLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRKA ST >gi|333032574|gb|GL891852.1| GENE 20 22041 - 22286 386 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLFKKFAVAAAVAATLAFVGCSKKEEAPAAGAASEAVAAASEATAAASEAAVAVDAAASE TAAAASDVAAAASDVAASAAH >gi|333032574|gb|GL891852.1| GENE 21 22456 - 22752 278 98 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148826992|ref|YP_001291745.1| 50S ribosomal protein L35 [Haemophilus influenzae PittGG] # 1 92 1 92 96 111 57 1e-23 MTALTKADMADHLSELTSLNRREAKQMVELFFDEISQALIAGEQVKLSGFGNFELRDKRE RPGRNPKTGEEIPISARRVVTFRAGQKFRQRVGNEQID >gi|333032574|gb|GL891852.1| GENE 22 22749 - 25130 2733 793 aa, chain - ## HITS:1 COG:YPO2428_2 KEGG:ns NR:ns ## COG: YPO2428_2 COG0072 # Protein_GI_number: 16122648 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Yersinia pestis # 140 791 1 655 656 578 47.0 1e-164 MKISENWLRTWVNPAIDSDTLSDQLTMLGLEVDELAPVAKPFTGVVVGEVLTVEQHPDAD RLRVTTVNIGSGEPLQIVCGAPNVRAGMKAPVATIGAILPGDFKIKKGKLRGVESQGMLC GASEIDLEDKIDGLLELPDDAPVGVNIREYLKLDDNVIDISITPNRGDCFSIRGIAREVA VINQLQMNEPEIKSVDATITDEKKVVINTDGAPRYLGRVIKNVNVKAATPEWMEQALARS GIRTHSILVDVTNYVLMELGQPMHAFDLAKIEGTVHVRQAQPQEKLQLLNDQEVELQDDV MVIADDQKALAIAGIMGGLASSVTDDTTDIFLESAFFAPLAIAGRARRFGLHTDSSQRYE RGVDFELPLIAMNRASQLIQELAGGEFGPITVVEKSDLLPKREAIELKQAQVDQLLGYKV AAEFITDALTRLGCEVTVQANGEWSVVPPSHRYDMAIYQDLIEEVARIDGYDNIQISLPS MDVQLAKYQDRFEIAQLRQTVVTLGYQEAISFSFADAKLEKQLNPQVSPLMLANPISSDL AVMRSTLLSSLIPCVQYNLNRQQSRVRFFELGLRFDYQNANSIQDLKQIPTLALVAVGSR EPESWHAKPQPMDFFDFKGEVEEILAAGRVKVEYVRSERPWLHPGQSAEILVDGQSIGYL GRLHPSLENELDLSTTWVAELDQAAVLQSYVSNFTELSRFPSVRRDIALLISDNINVRDI QQLIEKTGGELLDSTWLFDVYTGQGVEEGKRSLAFALLWQHPSRTLEDAEIKSGMDNIIQ VLENTYQATLRAS >gi|333032574|gb|GL891852.1| GENE 23 25164 - 26144 1101 326 aa, chain - ## HITS:1 COG:VC1219 KEGG:ns NR:ns ## COG: VC1219 COG0016 # Protein_GI_number: 15641232 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Vibrio cholerae # 3 325 4 326 327 438 63.0 1e-123 MSLEALTTEALAAIAAAQDLVALDQVRVQFTGKKSQLAEQSKALGKMDPEERKVQGAAIH AVRETINNALTERQTALQQAALAQKLASETIDITLPGRGQRVGTVHPVTQVQERICQFFT KAGFTVATGPEVEDDYHNFEALNIPGHHPARAMHDTFYFDANHLLRTHTSGVQIRTMETS QPPIRIVCPGRVYRCDSDQTHSPMFHQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKV RFRPSYFPFTEPSAEVDIMDERGRWLEVLGCGMVHPNVLRAAGIDPDKYKGFAFGLGVER FAMLRYGINDLRMFYQNDVRFLRQFA >gi|333032574|gb|GL891852.1| GENE 24 26287 - 27303 899 338 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00604 NR:ns ## KEGG: ACICU_00604 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 338 1 338 338 652 100.0 0 MRSIIMALNQIWKQQLTLVTYGNEYLRQNLSFSQWRQHHIFDQHSFQFRDLISQHLLAQH FQVWLEALKKQGTTQISLHLSTILNEEQNPNNNVELLPYAHFIVSHQNNKKIAWIFGHEL AEWYSNDNEFEPPLTQRSDLRLETFWRFELNEKLSKKVEADLKAPQWDEISDFMETELFR SKYAAGFEEPEFQKKYFDGSTHQISVEHQPTLALIPESYPADCAHQLLYRTQALSDYLEQ KKRTANDPLGEDLDQEQIINLRNFTHKTDDLFAKLIVKAANHYQTAQLKPVEKPSPFDTT NESATHLKAPHHKAGGTGVIKLIVLTIIICALAYYFGL >gi|333032574|gb|GL891852.1| GENE 25 27310 - 27813 436 167 aa, chain - ## HITS:1 COG:BH2157 KEGG:ns NR:ns ## COG: BH2157 COG0454 # Protein_GI_number: 15614720 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Bacillus halodurans # 9 165 4 165 180 83 34.0 2e-16 MKPLNDTDIRIASFKDALSIAEVHVQSWKETYTGMIKQEILNELNVLDKQQLWKEISRSP DHKLFIYTENGVVKGFLDGYLNPENNIAEIRAFYLLREIQRKGVGRALFQKFYQCALNQG YAFIRLEVFNKNPSRFFYEKMGAKLTGEAELPEFGLGITELFYEWQL >gi|333032574|gb|GL891852.1| GENE 26 27872 - 28429 584 185 aa, chain - ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 10 182 10 182 184 208 53.0 4e-54 MKDEKFLNDLIQKIQQGHQFKYLYFWGHTPKKANLIDKSCFSQWFPAQFNVEGIEYFTAE HYMMAQKAKLFNDKEIFAQILQVKHPNEAKQLGRKVRNYNEQIWQEKRFDIVVQANFAKF SQHPELKKFLLATKDRILVEASPVDKIWGVGMAQDHPHIQDPSLWQGLNLLGFALIHVRE LLLTE >gi|333032574|gb|GL891852.1| GENE 27 28520 - 28879 588 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50086059|ref|YP_047569.1| 50S ribosomal protein L20 [Acinetobacter sp. ADP1] # 1 119 1 119 119 231 100 2e-59 MARVKRGVVAHRRHKKILARAKGYYGARSRVYRVAFQAVIKAGQYAYRDRRQKKRQFRAL WIARINAGARQNGLSYSRMIDGLKKAQVIIDRRVLADIAMHDAVAFAALAEKAKGALAA >gi|333032574|gb|GL891852.1| GENE 28 28891 - 29085 324 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634337|ref|YP_001708073.1| 50S ribosomal protein L35 [Acinetobacter baumannii SDF] # 1 64 1 64 64 129 100 6e-29 MAKLKTRRGAAKRFKATANGFKRKQAFKRHILTKKSAKRIRQLRGCVMVHVSDVASVRRM CPYI >gi|333032574|gb|GL891852.1| GENE 29 29334 - 30584 1115 416 aa, chain + ## HITS:1 COG:all0371 KEGG:ns NR:ns ## COG: all0371 COG0477 # Protein_GI_number: 17227867 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 3 395 17 402 422 275 40.0 2e-73 MQKHDAFAALRYRDFSIVTINQFCLTLAILIQEIIVAYSLYQITKDPLTLGLIGLAEAIP FIALSLWGGYFADKFNKQVIMKICLFFSVPLPLVLWLLFHLHGLGHISVNFLSWGIYAVI FGLGTIRGFYNPSATSLKPFLIPRELYANGATWTTIGWQSGVIIGPMLGGFMLAYLGRET SLFSVAGLLTICFILINLLHKRSFPKIETANVLESLGDGFRFIWKTKIVLWAISLDLASV LFGGVIALLPIFAEDILKVGPEGLGYLRAAPSIGALITMIALTRFPPTQHAWRNMLLAVA GFGVFTILFAFSNNMWLSLFALAMTGACDSISVVVRQTILQIFPPENMRGRVAAVNGMFV SSSNELGAFESGLAAKYLGTIAATIFGGCMTLAVVTFCWLKTNDLFKVDITKSSED >gi|333032574|gb|GL891852.1| GENE 30 30624 - 31052 295 142 aa, chain - ## HITS:1 COG:PA2752 KEGG:ns NR:ns ## COG: PA2752 COG1238 # Protein_GI_number: 15597948 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 3 141 7 145 147 139 56.0 2e-33 MLSYFLLFLSAFGAATLLPLQSEAVLAALLLKNQHSAFLLILIATFGNVLGSCINWWLGL KIEQFKHKKWFPVSEKRLEQAQRFYHKYGFYSLLLSWTPVIGDPITLVAGLFKENFWRFL FMVLIAKAGRYIFIYWVITGFI >gi|333032574|gb|GL891852.1| GENE 31 31105 - 31725 742 206 aa, chain - ## HITS:1 COG:PA1033 KEGG:ns NR:ns ## COG: PA1033 COG0625 # Protein_GI_number: 15596230 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pseudomonas aeruginosa # 1 203 1 205 213 269 65.0 2e-72 MIDLYYWGTPNGHKITIALEEMGLDYTLYPINILENDQFQPDFLKISPNNKIPAIVDQDG PRGEPISVFESGAILQYLGRKTGLFYPKDEQERVEVEQWLMWQMGGLGPMLGQNHHFNRF APEKIPYAIDRYVNETKRLYGVLNKQLIGQKFVAGEYSIADMAILPWILRYEWQGIQLED YPYVQEYIVRLTARPAVQKALSIKVI >gi|333032574|gb|GL891852.1| GENE 32 31931 - 32428 526 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163801060|ref|ZP_02194960.1| 50S ribosomal protein L35 [Vibrio campbellii AND4] # 1 164 1 166 166 207 60 2e-52 INDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEIVANAEPPVCKIMDYNKHL FDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRGRE MAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLLGPKKKK >gi|333032574|gb|GL891852.1| GENE 33 32488 - 34410 2366 640 aa, chain - ## HITS:1 COG:PA2744 KEGG:ns NR:ns ## COG: PA2744 COG0441 # Protein_GI_number: 15597940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 1 636 1 636 640 1074 77.0 0 MPIITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQII TPKDEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPRPFTLDDMAAI EERMKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDM CRGPHVPNTKFLKSFKLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAEK RDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDF TLWEKSGHAANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSC HRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLS TRPEKRVGDDALWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCG TIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLSPVQ ACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREV EEGTVNVRTRSGKNLGTMSVDAFIDLVKSAVAERGRYIVE >gi|333032574|gb|GL891852.1| GENE 34 34822 - 36450 1725 542 aa, chain + ## HITS:1 COG:PA4198 KEGG:ns NR:ns ## COG: PA4198 COG0318 # Protein_GI_number: 15599393 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Pseudomonas aeruginosa # 14 538 14 537 540 671 59.0 0 MVSAYNELPRTPANFVALSPLRYLERAAYIYPDQASIIHGNRQISWKQTYQRCRQFASQL QQLGIVKNDTVSVLLPNVPAMIEAHFAVPMAGAVLNTLNTRLDAKTIAFMLEHAETKVLL VDPEFVNLAREALSLIPNQHIIVIDVADEEYEGENQFLGSFEYEEWLAQGDANFEWQLPE DEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGMKPRAVYLWTLPLFHCNGWC FAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGAPIVLSMIINLPKEKQPSIEHHV EVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSALCASQAGWSDLSITEQAQLHSR QGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIVMKGYLKNPKATEEAFAGGWFH TGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDVLYKHPAVLTAAVVAKPDERWQE VPCAFIELKTGASVTPEEIIEHCQKELARFKVPKDVVITEIPKTSTGKLQKFILREWAKE RA >gi|333032574|gb|GL891852.1| GENE 35 36512 - 37048 711 178 aa, chain - ## HITS:1 COG:PA4473 KEGG:ns NR:ns ## COG: PA4473 COG3028 # Protein_GI_number: 15599669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 12 171 32 192 200 62 27.0 4e-10 MARRPKRYTEEDFDSLEGRASKTEQKKAVQRMAALGEQLAQLSIKQIQKLPVDERLIDAL LEVQNISSFEARRRQFQRVGKLLRNEDETVILSYLTPQQGAKKQAQLMRWVDRMIEQGDP AINEFSKIYNASERHTLRQHVLRINRDKTQQVAEADLEATKMKFINYVQQVALLSDQG >gi|333032574|gb|GL891852.1| GENE 36 37051 - 37362 261 103 aa, chain - ## HITS:1 COG:RSc0347 KEGG:ns NR:ns ## COG: RSc0347 COG1925 # Protein_GI_number: 17545066 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Ralstonia solanacearum # 15 103 1 89 89 74 44.0 4e-14 MVCSGLTQRNEALVMIDTTVDVINKLGLHARASGKLIEVTTKFRSSIQIGKGDHLVDAKN IMSLLMLGAGKGTTLRLVIDGTDEEQALNEVQALFAAKFYEAD >gi|333032574|gb|GL891852.1| GENE 37 37317 - 38168 626 283 aa, chain - ## HITS:1 COG:PA4465 KEGG:ns NR:ns ## COG: PA4465 COG1660 # Protein_GI_number: 15599661 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Pseudomonas aeruginosa # 3 279 2 284 286 249 44.0 5e-66 MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDV RSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIH EEKQLLIPIQFRATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADY VFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRH YMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS >gi|333032574|gb|GL891852.1| GENE 38 38191 - 39039 979 282 aa, chain - ## HITS:1 COG:PA4730 KEGG:ns NR:ns ## COG: PA4730 COG0414 # Protein_GI_number: 15599924 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Pseudomonas aeruginosa # 1 277 1 280 283 285 53.0 6e-77 MKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKLCDVVVVSIFVNPT QFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISVSQITDDLCGS SRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAE DGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQGKDLQQVLADLKTLLTDNGFVVDY VEARQPNLLAASQFDRDIVLFVAAKLGGTRLIDNLQVAFTPQ >gi|333032574|gb|GL891852.1| GENE 39 39043 - 39852 1125 269 aa, chain - ## HITS:1 COG:panB KEGG:ns NR:ns ## COG: panB COG0413 # Protein_GI_number: 16128127 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate hydroxymethyltransferase # Organism: Escherichia coli K12 # 3 266 5 264 264 281 54.0 7e-76 MISLSDLRKFKAEGRKFSCLTCYDASMAKAMELAEIDTILIGDSLGMAIQGRDSTLPVTV EDMAYHTAAVRRGNQHALIMTDLPFMSYATLNDALQNAKTVMQAGAQMIKIEGGAWLSET VQVLTRNGVPVCVHLGLTPQSVHVFGGYKLQARTREAADQLIADCTAVVEAGAAVLLLEC VPAQLGQEIAELFPNTPVIGIGAGNATDGQVLVVQDMLGLTFGRVARFVRNFMKEQSGET AILDAFKAFHAAVQDQSFPAKEHTFQVEL >gi|333032574|gb|GL891852.1| GENE 40 39898 - 40404 224 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148994682|ref|ZP_01823786.1| 50S ribosomal protein L13 [Streptococcus pneumoniae SP9-BS68] # 1 151 103 264 278 90 37 3e-17 PSYFWADTMTVTTYIGLGSNLGDSRQILSEAIAKLKSLGEVKVSKLYQSPPMGPQDQPNY LNAVAQLKTELLPLDLLDQLQRFEQEAGRVRLRHWGERTLDLDLLIYGNEKIQNERLTVP HVGILQRDFVVIPLLDLDADLHINDQPLKNLELIQQPTLTVLADESWA >gi|333032574|gb|GL891852.1| GENE 41 40377 - 41840 1451 487 aa, chain - ## HITS:1 COG:PA4727 KEGG:ns NR:ns ## COG: PA4727 COG0617 # Protein_GI_number: 15599921 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Pseudomonas aeruginosa # 11 405 33 439 467 303 42.0 6e-82 MQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNAT PSQIKEVFGRRCRIVGRRFELAHVYSGRELIEVATFRAPPKKAVTSASGMILRDNNWGTI EQDFARRDFSINTLYYQPRKGIVLDFCKAIDDVKSKTLRLLGDPVQRFEEDPVRMLRTLR FAAKLNFKIDSAILDIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIDFGVWK QLFADIRPDLTPFIQRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCDFYLSKGVVPA EARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALASHARFRAGFD FLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKAKSRRKVAAEPVESNKVD TEIEPLVDVPESRSRRGKKERARQEQSIDRFIEKSSAAQTNVMSDHPILKRKRVQRDLSQ VIFGPTQ >gi|333032574|gb|GL891852.1| GENE 42 41965 - 42375 311 136 aa, chain - ## HITS:1 COG:NMA0211 KEGG:ns NR:ns ## COG: NMA0211 COG1555 # Protein_GI_number: 15793235 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Neisseria meningitidis Z2491 # 72 136 72 136 154 66 43.0 1e-11 MQYSMRFWKNKYFVLIILCLGVISPSVYAQSFDQNFQEWKAKQQMYDQKLNITKSSHSNG SKISQTKNFNDSTGQIHLNQANVNEFQQLKGVGEKKAQAIVEYRQKNGSFKNIDEIKNVK GIGPAIFEKNKSRLAL >gi|333032574|gb|GL891852.1| GENE 43 42344 - 43150 732 268 aa, chain - ## HITS:1 COG:CC1747 KEGG:ns NR:ns ## COG: CC1747 COG1694 # Protein_GI_number: 16125991 # Func_class: R General function prediction only # Function: Predicted pyrophosphatase # Organism: Caulobacter vibrioides # 4 249 21 269 275 203 44.0 3e-52 MDKLLKIMQELREKCPWDQEQTPMSLTKYAIEEAYEVEAAIRQGDINEIRNELGDLLLQV VFQSQMFSEQGAFNFQDVVEAISEKLVRRHPHVFQADQFNNLTPEQVSELWEQIKQQEKQ GKPQSRLDEIKHGPALSQAQEIQKNVAKVGFDFETVEDAYTKLEEELDEFKQALKNQNSN EIQDEFGDCLFSLVNVGRKLGISSESSLLSTIHKFRSRFAFIEEQAIKQQRTLEDMTLSE MDELWNQAKRQLKSGEKPHAIQHEILEK >gi|333032574|gb|GL891852.1| GENE 44 43262 - 44035 616 257 aa, chain + ## HITS:1 COG:Cgl2992 KEGG:ns NR:ns ## COG: Cgl2992 COG1028 # Protein_GI_number: 19554242 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 4 243 3 238 251 172 41.0 4e-43 MKHSILISGAAQGIGAEIARVFYQRGYKVGIYDINESLAQNLAQELGPNACAGYLDVSDY SQWQHILKEFTDWAGELNILVNNAGILYSGAFENIDIKSHQRTININVNGVINGCHAALP YLKQASFARVINLSSASAIYGQADLISYSASKFAVRGITEGLDVEWKKYGIRVLDVMPLF VQTAMVNNMDAGSIQNMGVDLTPNDIAQQVLSLVEKKAHFWTPTHTPVGIKTKLLYQLST ISPQFLNRLTNIYLSRK >gi|333032574|gb|GL891852.1| GENE 45 44080 - 46386 2372 768 aa, chain - ## HITS:1 COG:PA0934 KEGG:ns NR:ns ## COG: PA0934 COG0317 # Protein_GI_number: 15596131 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Pseudomonas aeruginosa # 29 763 16 743 747 642 46.0 0 MVTVREQLPEQLTELSEETTVEHAAETQVGLASWLDRVREILDGAELKQLEEVAHLTLQK ELDSTVNHRSNTFATGVGMADILAHLHVDEDTLSAAMLYRSVREDITDIEEVKRKFGEQV YNLVKGTLAMGKLSELIEKNKRLEDHFNNNQREHLSGIYKMLISVTEDVRVVLIKLAERT YSLRELANSSRERQERVAREILTIYSPLAHRLGIAQLKWELEDLAFRYLAPDRYKEIASL LNEKRLEREHYIQFVIDRLKSELAAHGIEAEITGRAKHIYSIYRKMKSKNLSFDQLYDIR ALRVLVNSVPECYHSLGIVHQIWRHIPHQFDDYITNPKANGYRSLHTAVIAENKSLEVQI RTHEMHDEAELGVCSHFNYKEGSKNTDHSFNHRLHSLRAVLEHYQERNETTVHQNEDETE GFDQLQDFEGFEKIYVFSRDGDIKELPRGSTVLDFAYHVHTEVGNKCYAARVNQRYVPLT YTLKTGEQVEILTKKDREPNRDWLVNSLGYIKTARARDKLRHWFRQQDRSKNLEVGRELL NKELSRLAIHPKSIDLNDYSSHFNVKTGDDILVSLVSGDISLHALINQINRQMHLDQDEP ELVLKPTLNPRASHTLSAHGILIDGLDNVELHIAQCCQPVHGESIAGYITLNRGVSIHKV LCSDYQRMIKQEPERAVEADWEMQPTRGQSVQIVVEAYDRRGLLKDLTQVIFSDQINIRQ VNTISEADGIANMKLLIEVKGLAQLSRLLARLEQQPGIISARRMIQGV >gi|333032574|gb|GL891852.1| GENE 46 46417 - 47808 925 463 aa, chain - ## HITS:1 COG:XF2358 KEGG:ns NR:ns ## COG: XF2358 COG2265 # Protein_GI_number: 15838949 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Xylella fastidiosa 9a5c # 5 457 2 442 443 344 40.0 2e-94 MKQQAKSRKPQQPEYIFQVETLSHEGRGIAHYGSHPDHPADKHGKKVFIRYALPGETVKA QITHEAKRLEEAEMVALLAEPSANRVEAVCPHYGICGGCSMQHIHPDEQICLKQNVLQSH LQHFAGIQPEQWLEPIRSLQSDYRRRARIGVRYLPKQDRLILGFREHHSNRLTSIHTCSV LDKKLSDSLPELRNLLQSLKGKAHIGHVELAKGDYETSLLVRHIEKLNNADVNQLRQFAL HKGWQLYLQPKGPESLRRIDEEQGAMRLHYALNAFDVNFAFSPLDFTQVNATVNEQMVQL ACELLQLQQGERVLDLFCGLGNFSLPLARCVGAKGQVVGVEASEEMVQRATDNAKRNNLV QASFFSQDLTKDFSHHSWANQGFDALLIDPPRAGAYEIMQYVPNFGAKRIVYVSCNPATL ARDAGVLVQHGYQLKKAAVMDMFTHTEHVESIALFEKIQEIND >gi|333032574|gb|GL891852.1| GENE 47 47818 - 48636 827 272 aa, chain - ## HITS:1 COG:NMA1628 KEGG:ns NR:ns ## COG: NMA1628 COG3298 # Protein_GI_number: 15794522 # Func_class: L Replication, recombination and repair # Function: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB # Organism: Neisseria meningitidis Z2491 # 6 254 5 264 264 159 36.0 5e-39 MRFPTLVFDIETLTDLKAGAHLYHLDLPEADVEQALTKIRRQESGMDFQRLPLHEIVCIS GLWIDESGFRLFSFSREHYSEAEILQKFLSIFDKRHPTLVSWNGSQFDLPVILFRAMYHG LSAPGLFDQGELDSQKRFNNYQNRYHHRHIDLMDVMAMFNGRNFQKLDDVACILGLPGKR GESGYHVPEYVRTEQWLKLTSYCEGDVLNTWFIYLRWLLLKGQMNIDEHNHWISSSIEYL QTMPQQADFLEVWQRTSKHTEFTSHYFNPLNF >gi|333032574|gb|GL891852.1| GENE 48 48659 - 49573 487 304 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 19 303 11 307 308 192 37 8e-48 MSNTQPDFLADEFLLDHYVGKTPLVRLQRLACHTQATVLAKLEGNNPAGSVKDRPAYNMI MQAEKRGQIKPGDTLVEATSGNTGIALAMVAAMRGYKMKLIMPGNSSQERKDAMRAYGAE LIEAPNMEAARDMALQMQAEGLGLVLNQFGNPDNVEAHYLTTGPEIWKQTGGKITHFVSS MGTTGTIMGVSKYLKEQNPDIQIIGLQPSEGSNIAGIRRWPQEYLPTIFEPKRVDQIMDI PQIEAEKTARRLAREEGISAGTSSGGAVWASVKIAEENPDAVIVCIICDRGDRYLSTGLF SVQD >gi|333032574|gb|GL891852.1| GENE 49 49746 - 52553 2716 935 aa, chain + ## HITS:1 COG:PA0928_1 KEGG:ns NR:ns ## COG: PA0928_1 COG0642 # Protein_GI_number: 15596125 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 129 518 124 506 509 246 40.0 1e-64 MSNFNKTLSKRLRLNHAYGQLIALIFVPIMILTCVGAFLVLTETSRSAKQQQLHHASAIL ARYNQIAKDLYTLVELQPDEYDHAQHIMQSMFSEKNLKRAALIDSNGQTYLSIGYRDNRY WPNFTQNNNFFGPISYNHNNIYGVRIIDTAGKPPVWLLIEMDNQPLELARYRILIALVIT GLMTLLLLLLCLNFYSRRWIAPMYEIRMQLQRLNADTLDQHIVINSSGELRLLQRDIANV VKRLHFSFLELKEHTEQTEEDLRRTLDTLEVQNITYRQARDQAISSNQAKSVFLANISHE LRTPLNSIDGFIHLLLRQQNLSNEQNLYLQTIRKSSAHLLALINDVLDFSKIDAGKLELE TAPFDLEEAVFDVMDMLSPLAAQKHIAMAFYYADNIPQQVIGDALRFKQILTNLISNAIK FTPDGEIIVRVRMEHDDIGQCLLHFSVQDSGIGLSGTDRKKLFESFSQGDASVTRQFGGT GLGLAISKQLVHLMHGQIGFEDNQERAPTEKGSTFWFTAQFAVDEEHEIEHPHFEHLQVV SYLAHPATASVLRYYLENYQVPHIETQSILDLFSRLKHLDQKDNTWLIVDHSGDTEALLK EIRSRYQGNLAVYGYQMTLEPNMLTEYRARPLYQPLSRSGLIQLLSDQPIFEEEQQDFNG QGLHILAVDDHLPNLIVLEALLGELNVKTTKALSGQEALNIIQERIDQKLKPFDLVFMDI QMPVMSGIDTTRAIRSLESTLDGEMQLPIIALTAHALADEKQKLLKVGMNDYVTKPIQME QIIQILTQWTKNNFTAQNLAKDHHVVAEALDPEILNWQQSLQLAANKEDLAQDLLKMLVD SFPTELEEMQQLIELEDFPQLEHVLHRLYGATRYVGTPKLQQVTGDFEQFISTLRKERRR ADDGFIEEVMRRFDELGLVIKEVESAAHQILVIPD >gi|333032574|gb|GL891852.1| GENE 50 52650 - 53438 970 262 aa, chain + ## HITS:1 COG:DR1151 KEGG:ns NR:ns ## COG: DR1151 COG1024 # Protein_GI_number: 15806171 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Deinococcus radiodurans # 4 215 49 256 302 123 36.0 4e-28 MALLRIEKNNGIATVYLNRPDKRNAMSFALLKELVTTAKAIQKDRDIRCVILTGEAQVFS AGIDLSDLNNPKNSAFAIWELVKPGQSLFQKAFLIWQNLPVPVIAALEGYCFGAGMQLAL AADIRIAHPDIKMSIMESRWGLVPDMGLTRSLKGLIGVDLAKELTLTARVFDGNYAKDIG LVTHLSENPLEKANAIASEMLQRSPDALTAAKRVLDAMEHQPEKSLRLEKIWQLKLLLGK NSKLARKKDKHPEVKFLPRQYR >gi|333032574|gb|GL891852.1| GENE 51 53449 - 54315 975 288 aa, chain + ## HITS:1 COG:PA3312 KEGG:ns NR:ns ## COG: PA3312 COG2084 # Protein_GI_number: 15598508 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Pseudomonas aeruginosa # 9 284 8 289 296 241 49.0 1e-63 MNFDRNTPIAFLGIGLMGSRMASRLIQAGFQVAVWNRTASACEELIDIGAHALDLSNIGQ YPLILTCLADDKAVQAVFDQIQTNLKAGQVIVDFSSLSVAATKALAQAAASQDVIWIDSP VSGGTAGAEQGTLVIFAGGDAQTIEALSPVYNVLSQRVTRMGDTGTGQATKICNQLIVAA NSALIAEAVALADRAGVDTTLLAPALAGGFADSKPFQILAPRMATHTFEPVQWKVQTLSK DLNNAVTLANNVNLDIPVAQKALLQLQTHQKNGFAEKDLATMIQVVEQ >gi|333032574|gb|GL891852.1| GENE 52 54332 - 55126 886 264 aa, chain + ## HITS:1 COG:PA1501 KEGG:ns NR:ns ## COG: PA1501 COG3622 # Protein_GI_number: 15596698 # Func_class: G Carbohydrate transport and metabolism # Function: Hydroxypyruvate isomerase # Organism: Pseudomonas aeruginosa # 1 257 1 257 260 198 41.0 1e-50 MGRLAVNLSMIFTEVPLIERFALAHAEGFEHVEIQFPYELAISDIQDQLERYNLNLCLIN VPAGDLMQGGNGLAGIPGQEAAFREALQLAIRYATALKVPRVNILAGKQPQDSDLLPCLK TLASNLKLACDLLTEHDIEPVFEMINGTDMPRFLVQNIAQAQEMLEAVNHPALKMQYDCY HMAMMGEDVLEGLQENIHQIGHIQFADCPGRHEPDTAQIPYEQIFSWIKQSAYEGYIAAE YKPKNGSNQSFTWKKKYFSDDVNI >gi|333032574|gb|GL891852.1| GENE 53 55208 - 55609 521 133 aa, chain + ## HITS:1 COG:XF2180 KEGG:ns NR:ns ## COG: XF2180 COG0799 # Protein_GI_number: 15838771 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Xylella fastidiosa 9a5c # 28 125 34 131 148 119 60.0 2e-27 MNLEPSPSVSNSHDFAMNTSNKDVQACLKVVHDALVDVKAKDILQLDVSSISNVADAIVI ASGTSTRHVKALADNVAEEARKAGFRPIGVEGERDAEWILIDLGFVVVHVMLPTARKFYD LESLWRTAPESVA >gi|333032574|gb|GL891852.1| GENE 54 55861 - 56682 874 273 aa, chain + ## HITS:1 COG:ML0315 KEGG:ns NR:ns ## COG: ML0315 COG1028 # Protein_GI_number: 15827080 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium leprae # 4 230 18 250 304 148 40.0 1e-35 MKILITGANTGIGFATAEQLVKQGQHVILACRNPQKAQEAQNKLRSLDQGQVDVVSLDLN SLELTQKAAEEIADKYGSLDVLINNAGLFSKTKQLTVDGFEQQFGVNYLGHFLLTQKLLP VLKQSPQARIIHLASIAHWVGSIKPNKFRAEGFYNPLFYYGQSKLANLLFSNALAEQLAD NSITNNALHPGGVASDIYRDLPKPVYAAMKVGLVPTSVPAKLITEMATGDTWQNRNGEYV SAHMPDWKSSHAKNQQLARDLYQQSMTLVEKFL >gi|333032574|gb|GL891852.1| GENE 55 56735 - 58189 1849 484 aa, chain - ## HITS:1 COG:PA0196 KEGG:ns NR:ns ## COG: PA0196 COG1282 # Protein_GI_number: 15595393 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Pseudomonas aeruginosa # 11 479 9 477 478 445 56.0 1e-125 MEFIQANANWLYLVGAILFILTLRGLSGPKTAIQGNRYGMIAMAIAVVTTFFVANNPVIW MIGGAMVLGAIVGIARARTVPMTQMPETVALMHSLVGLAAVLIAVAAILHNNQLTALFAQ NEAALTAAGVQHAHMSKVHLFELFVGCFVGAITFTASVFAYGKLAAKKWAKTISGAWVKP VQALIFVAMLACGFYFFTTGNMTAFWAMTALALAFGWVWIAPVGGGDMPVVVSLLNSFSG WAAAGIGFTLENNMLIVAGSLVGSSGAILSYIMCKAMNRSIINVLFGGAMGGAAVSTAAK GEQVQRNYRSGSADDAGFLMSNADSVVIVPGYGMAQGRAQNAVKELCEILKEQGVRVRFA IHPVAGRMPGHMNVLLAEADVAYEDILEMDEINSDFPATDVVLVIGANDVVNPAAKDDPG SPIYGMPILEAHKARTIMVIKRSMATGYAGLDNDLFYNEKTMMIFGDAKKVVEDMTKAIN GTGH >gi|333032574|gb|GL891852.1| GENE 56 58202 - 58516 381 104 aa, chain - ## HITS:1 COG:VCA0563 KEGG:ns NR:ns ## COG: VCA0563 COG3288 # Protein_GI_number: 15601322 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Vibrio cholerae # 6 99 430 510 512 97 61.0 5e-21 MVETITIFVLAIFVGYYVVWGVTPALHTPLMAVTNALSSIIVVGAMLQTVGLPVLGVDAN VAFQSVNVVSVLGAIAVFLASINIFGGFAVTARMLEMFKPKQKK >gi|333032574|gb|GL891852.1| GENE 57 58528 - 59655 1447 375 aa, chain - ## HITS:1 COG:PA0195 KEGG:ns NR:ns ## COG: PA0195 COG3288 # Protein_GI_number: 15600764 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Pseudomonas aeruginosa # 1 375 1 372 372 328 51.0 7e-90 MQIGIPTETVVGENRVAATPETVKKLISAGHSVVIERGAGVKAAYIDSAYEQVGATITDD AYTGSQIILKVRAPQGGEIQKLAANTTVVAMFDPYRNTELDQFANQQVSAFALELLPRTL SRAQNMDVLSSQANLAGYKSVLLAAAEYQRMFPMLMTAAGTVKPARVVIMGVGVAGLQAI ATAKRLGAIVEATDLRPTAKDQVESLGGKWLDVPMSEEEQQRAADAAKNGYGWMPGEQYI KDQAAIVDKAVSNADIVITTALLPGRDAPRLIKAETVAKMKPGSVILDMAVETGGNVEGS KVGETVVTENGVKILGIPNIPATVATEASALYARNVFNFVETLFDKEKNFAINQEDEIQK ALLVTHGGQVLLKRG >gi|333032574|gb|GL891852.1| GENE 58 59895 - 60821 455 308 aa, chain + ## HITS:1 COG:RSc2187 KEGG:ns NR:ns ## COG: RSc2187 COG0697 # Protein_GI_number: 17546906 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 11 302 19 303 308 128 30.0 1e-29 MKISLSSFQIGSFFALCSAFLFSTKAIFIKQTYALSPLVDGTVLMALRMLSALPFFLLIC WFNRHHNQGIKKKDWLILIFAGLLGYYFASWLDFMGLMFISASLERIILFLYPTLTVIAS SLLYKQKLDVKSLFAIFLSYGGTVLVMLQEHNNAPIQGNFWLGTSFVFASAVAFAGYLLL TPPLIKKFGSWNFTGLALTVACIGTLTHYTLSTPHPFQLLLQLPSSVIWYGIGLGFLVTV LPTVMLMQSIERLGASQSAMIASIGPVLTILLAVAFLNEHLNIWQWVGCFLNIVGVMMIT LRKKRLKH >gi|333032574|gb|GL891852.1| GENE 59 60889 - 61296 472 135 aa, chain + ## HITS:1 COG:SMc01714 KEGG:ns NR:ns ## COG: SMc01714 COG0251 # Protein_GI_number: 15964205 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Sinorhizobium meliloti # 8 131 35 157 162 110 45.0 6e-25 MNKEIFKIINPSTLYDPTPNAYSHIAVVSNFNNIIHIAGQGGEDQQGQLSSHFSEQVLQA FENIKYALVAANAELTDIAVLRILVVDHSVEKHEILIKIMKDLWKNHPFPACTLIPVPRL ALEHMLIEVEATAYT >gi|333032574|gb|GL891852.1| GENE 60 61315 - 62499 1206 394 aa, chain + ## HITS:1 COG:ECs3543 KEGG:ns NR:ns ## COG: ECs3543 COG0477 # Protein_GI_number: 15832797 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 13 380 12 381 394 241 42.0 1e-63 MSTPEDISQNKPLLWLMAAACGLCAGVNYYCQPLIHSIQQDFAVTQAQAALTVTFAQVSY ALGLLFIVPMGDIVNKAKAIPFLMMLCAVGLFTSAFAVNLPMLWIGTILAGLFSVAAQVL IPLATMTVKPEKTGEIIGFLMSGLLVGILLSTSLAGLFSNLFHWKVVYAISGILMLLLAY TLKSRLPYVMRMKLNYGQIFVSMAQLLKQEKRLLLRALTGAFAFASVSILYSTIALLLTS AHHLPDLFIGLVPLVGIFGALSTRYIGKYADQGYTRLLTWMGCGLFLVSWICFYFGQTLL SAYVIGFALIQLALALVHTSNQSIIFRLRPDAKSRINAIYMTTYFIGGAAGSALGIFAWN RGGWTMTCLAGVGLVVFCILFSMIDAFLQKKQMA >gi|333032574|gb|GL891852.1| GENE 61 62648 - 63652 1059 334 aa, chain + ## HITS:1 COG:VC0379 KEGG:ns NR:ns ## COG: VC0379 COG0042 # Protein_GI_number: 15640406 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Vibrio cholerae # 10 301 6 300 327 377 60.0 1e-104 MQSLQSLQPRISVAPMMDWTTKDYRFFARLFNPNVVLYTEMVTTGAILFGDAKRHLGYNA QEHPIVLQLGGSNPQELATCTKMAEDWGYDEVNLNVGCPSDRVQNNKIGACLMAEPDLVA ECIHSMQKVVNIPVTVKHRIGIDDMQSYEEMLHFVDTVAATGCTHFVVHARIAILKGLSP KENREVPPLRYEDVYRLKQERPHLTIEINGGIKTFAETQAHLQHVDGVMIGREAYHNPYL LAELGQLWNLEAPDRFDIMEQMLPYIEQRLAEGAPLSIITRHILGLFQNLPGARKWRQAL SGGNAKTLTDVENAIHNMQAAIIRTEEYLKEHQF >gi|333032574|gb|GL891852.1| GENE 62 63988 - 64497 472 169 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002998 NR:ns ## KEGG: ABBFA_002998 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 169 1 169 169 326 100.0 2e-88 MIIYDGQVADNYMYQDSNQAAIVVSHSTPSLPYPFTMKPNNHSTETNTPPAIDVEKFVAK LESITSRRSKARCARSIRIALESAGADVENHPIAASDWGDTLKKIGYKEINPAFDEPQEG DIYIIHRTRNHIYGHIAGYTGSEWVSDFKQSSYDVYKDDNVTYTYYRLG >gi|333032574|gb|GL891852.1| GENE 63 64505 - 65398 628 297 aa, chain - ## HITS:1 COG:PA3776 KEGG:ns NR:ns ## COG: PA3776 COG0583 # Protein_GI_number: 15598971 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 289 1 290 302 187 39.0 2e-47 MLTLKQFQYFIKIVEEGSFTAASEKLFIAQSALSRQMKLLEEEIDFQLFDRTDKRARLTP AGEVFYKKIKDNLLYLNEIIDLSKSVSEGKNRQIKIAHSSSIVVDNTKVQILKEVSLTQQ LSFEINTLSSEQQILALLNGEIDIGLIRPPVRHTLDGINTLKLYEEPLMVAVHIDHAKFA KSEKVYLKDLKDECFVSTPHAERGGLSYLVANLCLAAGFTPQKASIQSRKISQLQLVAAN LGVGIVPAEFQQILPANVKLIPLEDSLSLSEVLLVYRKGHDEIIQHCAEQIHQMFLS >gi|333032574|gb|GL891852.1| GENE 64 65686 - 66450 753 254 aa, chain - ## HITS:1 COG:VC2311 KEGG:ns NR:ns ## COG: VC2311 COG1179 # Protein_GI_number: 15642309 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 # Organism: Vibrio cholerae # 3 249 7 265 273 249 49.0 3e-66 MSDLPQNDEYDRRFAGVAKIYGDSSFQHYEQSHVMVIGIGGVGSWAVEALARTGIGEITL VDMDVVAASNVNRQLPAMTSTLGCEKVEIMAERCRQINPRIKVNIIDDFLTPENVAELLN PVPDIVLDCIDDVKAKLALMLHCRFNKIPLIVSGGAGGKLDPLKIRVADLSKTEQDPMLA KLRSQLRARGICKKPKEKFGITCIYSIDNPFSSADVCPSAGLRCGGYGSAVVVTSSFAMI AVAEVLKKLDLKKA >gi|333032574|gb|GL891852.1| GENE 65 66575 - 67048 415 157 aa, chain - ## HITS:1 COG:Cgl0439 KEGG:ns NR:ns ## COG: Cgl0439 COG0251 # Protein_GI_number: 19551689 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Corynebacterium glutamicum # 28 156 25 151 157 88 37.0 5e-18 MGRDTVFLKVESRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLD VDLSDAQLAASISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEI LYEILGLDTGRHTRTSVSVYQLPKNASVEINFIFALK >gi|333032574|gb|GL891852.1| GENE 66 67169 - 69925 3088 918 aa, chain - ## HITS:1 COG:PA1562 KEGG:ns NR:ns ## COG: PA1562 COG1048 # Protein_GI_number: 15596759 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Pseudomonas aeruginosa # 7 916 4 910 910 1398 76.0 0 MAKYSNINSFNALQTLTVGSSNYQIFSLTQAEKKLGDIAKLPKSLKVLLENLLRFEDQLS VKTEHIYALAEWLKTRTSDQEIQYRPARVLMQDFTGVPAVVDLAAMRAAMAEAGGDPEKI NPLSPVDLVIDHSVMVDHFADDQAFEENVQIEMQRNGERYQFLRWGQSAFNNFSVVPPGT GICHQVNLEYLAQAVWLGEDNGQTFAFPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAM LGQPISMLIPEVIGFKLTGKLQEGITATDLVLTITQMLRQKGVVGKFVEFYGDGLADLPL ADRATIANMAPEYGATCGFFPIDEVTLGYLKLTGRQSDRIALVEAYSKAQGLWRNAGDEP VFTDTLSLDMSTVQASLAGPKRPQDRVLLSEVPKTFNALMELTLKPAKEAKERLENEGGG GTAVEATKANIQHESPSCVIEGQEYPLNHGDVVISAITSCTNTSNPSVMLAAGLLAKKAI EKGLQRKPWVKSSLAPGSKVVTDYLLAAGLTPYLDELGYNLVGYGCTTCIGNSGPLPEPI EDAIQCHDLNVASVLSGNRNFEGRVHPLVKTNWLASPPLVVAYGLVGNIRTDLTTQPIGQ GKDGQPVYLKDIWPSQAEIDAVLQKVNTDMFHKEYAAVFDGDESWQAIQIPKSKTYEWAD DSTYIRHPPFFEGIGEPPKPIKNIEQARILAVLGDSVTTDHISPAGNIKKDSPAGRYLQE QGVEPKDFNSYGSRRGNHEVMMRGTFANIRIKNEMLGGEEGGNTIHVPSGEKLAIYDAAM RYQQEHTPLVIIAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQ FVDGQTRQSLNLTGHEVISIRGLSDGIQPHEILEVDVKGPNGVASHFNVLCRIDTLNEVE YFKAGGILHYVLRNLIAS >gi|333032574|gb|GL891852.1| GENE 67 70050 - 70862 665 270 aa, chain - ## HITS:1 COG:VC2353 KEGG:ns NR:ns ## COG: VC2353 COG0084 # Protein_GI_number: 15642350 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Vibrio cholerae # 3 263 22 269 283 163 39.0 4e-40 MHLFDTHTHFDVADFDEDRHQLALEAKKVGVDALVLIGFLQSRFDDLVQTHHQLKQWDNV PTSYLAPGLHPFYIEQHKPEHLSHLEQILQQEDCVAIGEIGLDTFLKEHKQPDIYAKQKQ YFGDQLDLATQYQKPVLLHIRKAHGDVLALLKAHKFKLGGIAHAFSGGVEEAKGLIKLGF KIGVTGQITNPNAKKLHTVVQAIGAEHLVIETDCPDMTPLCCQTSTEQRTRNTPVNLPYV LKSLAENLNMAESELADLLWKNSLSALKLS >gi|333032574|gb|GL891852.1| GENE 68 70862 - 71803 955 313 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00560 NR:ns ## KEGG: ACICU_00560 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 313 1 313 313 533 100.0 1e-150 MLTSKASLRLTLLASAIFLVACQPKSDPKESEDQQKPAVVEQKPVELTLKGETVPSKVTL PDCDGKTCPEFTVERLQSNFPFIDKIIDQQVLKALGQILEIAEPDAKAAQADKKTEASVA AATEQQDSFDAQVQRYANSFIDLDNELKALSSNHQINLLVKPKIIQSQGKVVTVVVNSSS YLGGAHGSAAQQYYNFDLKKEKQVKLEDLLRPEKKAALEKLAHEAFKAWVTDSKLANSVS EYEQAWPFKLTENFLLGDQGLILQYGEYEIGPYVVGLPRLVIPYDQLQEVLKEEYLPQPK AKPASTPAAKSAS >gi|333032574|gb|GL891852.1| GENE 69 71891 - 72733 815 280 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00559 NR:ns ## KEGG: ACICU_00559 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 280 1 280 280 474 100.0 1e-132 MNLSKKTIIALVVAAIALILAICVFVWKKPQSSSSSQENSASTQDHPVEKAEVLPYLNLT ETKASYAVPFCEKKNCIDVDIQTIKTQDAWLNSWIEKNQAKVIQAQINLKKDLSLQQAIN AYVKKSDEWQDKYSKNRAYELHIRTRIASQRNQYVLLQLALDSKQEEITIKDRYYFFVAD RKLHKNLTLLDVLKKDQQPTVHQIVQTAYQDWLKKQTADVNKQAPKTLYWGQADWFFDGE GVGLHYQANQITKDAPQLDIYLTTEQTKKILQPQVYEQMF >gi|333032574|gb|GL891852.1| GENE 70 72803 - 74395 1850 530 aa, chain - ## HITS:1 COG:PA3903 KEGG:ns NR:ns ## COG: PA3903 COG4108 # Protein_GI_number: 15599098 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptide chain release factor RF-3 # Organism: Pseudomonas aeruginosa # 8 530 5 526 527 791 72.0 0 MSFKDELAAQVAQRRTFAIISHPDAGKTTMTEKLLLWGKAIQVAGMVKSRKSDRAATSDW MEMEKERGISITTSVMQFPYKGHTINLLDTPGHEDFSEDTYRTLTAVDSALMVIDGAKGV EERTIKLMEVCRMRDTPIISFVNKMDREIREPLELLDEIENVLNIRCVPITWPLGMGRDF AGVYNILEDKLYVYKAGFGSTITDIEVRDGYNHADIREKVGELAWASFEESLELVQMANE PLDRELFLQGKQTPVLFGTALGNFGVDHVLDAFMNWAPEPKAHPTQERMVEAKEEGFSGF VFKIQANMDPKHRDRIAFMRICSGKYEKGLKMNHVRIGKEVRISDALTFLAGEREHLEEA WPGDIIGLHNHGTIQIGDTFTSGENLHFTGIPHFAPEMFRRVRLKDPLKSKQLQKGLKEL SEEGATQVFMPQISNDLIVGAVGVLQFDVVAYRLKEEYKVDCVYEPVSVNTVRWIHCDDE KILNEFKKKAHDQLSIDGGGHLTYLAPSRVNLQIMQERWPDIEFRSTREH >gi|333032574|gb|GL891852.1| GENE 71 74600 - 75463 721 287 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00557 NR:ns ## KEGG: ACICU_00557 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 287 1 287 287 570 100.0 1e-161 MSKKFEDFNNPREKALQGMKDSIPASQWEENLLFLKQLRNKIAQLPVSKHPAIEILNNGY LDKQTLTRIHLEYRHAIVQIFTDALLKAQFLTKQLEPKLHSGAKMFPRVLLSLNILDEFG FRPGLDKDNYYLGNPEYAHYPLYEDLLNDYGLTEADRRNYKPSKIADQVRTFLEASYDRY INVVALLAVAEEEVILFSPPLRQATKFVNIDVEGGGYYHVHGVSTDETAEAADDDHQDDL WFALAQAITKDDYESLTQLCLDYCALWTEFWDAQIADVQFIEEKKLA >gi|333032574|gb|GL891852.1| GENE 72 75779 - 76366 526 195 aa, chain + ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 1 159 1 161 193 90 32.0 2e-18 MTGQPMSKRETIITTAMTLFNQKSYTSIGVDKIIAESKVAKMTFYKYFSSKEVLIEECLR RRILEVQTSLLDKVNSADDPLNKLKSIFNWYIDWINTEDFSGCLFKKATIEVLQLYPSIK KQVNKYREWIYSLVLSIFLELEIEDPKVLSSLFLNIIDGLIIDGTINKPEINSEETWSYI NKLIELETKQKYEAA >gi|333032574|gb|GL891852.1| GENE 73 76584 - 77147 374 187 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00555 NR:ns ## KEGG: ACICU_00555 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 187 1 187 187 335 100.0 5e-91 MSYSDLSFRALSVLHKSRYLFNKHGFHNVGVDRIVREAEVPKASFYNYFHSKERLIEMCL HFQKDVLKEQVRSIIYIQKDLILREKLKKIFFLHTNLDGYYHLLFRAIFEIEKLYPAAYQ VVVQYRHWLTTEVYKLLLTVKKDTTKSDSDMFLFTLDGAIIQLLDETRGDTRELLFAYIL KGIFLKD >gi|333032574|gb|GL891852.1| GENE 74 77554 - 77628 78 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLLIGLRQPAGNVGQQAKDNLRV >gi|333032574|gb|GL891852.1| GENE 75 77752 - 79806 1728 684 aa, chain - ## HITS:1 COG:RSc0510_3 KEGG:ns NR:ns ## COG: RSc0510_3 COG2200 # Protein_GI_number: 17545229 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Ralstonia solanacearum # 418 680 3 266 282 249 45.0 1e-65 MGHVDYDSTLIVGSFIAAGAICYIVISMEQLIFKQTYKKIEPFILLLNGLLLAAAISIVH IVGMHAYHLFEAASSNVPLITLAFGISAVLSSVAIWLTSRFTLPIFRLILSSVIMGIGIS ASYYVSMLGWNIDIYKKDYTSFLILFSVLIAMSGSGLAFLLAYKLKESERHRISLKLAFA VMMTLSIMGMHYTALISTNITDKFVSQYQAEHDLLLFTIILVTCLVLVASFIVAVLEQRL NQRNLELRKANKELANLSIQDNLTKLPNRLYLVDYAEVLLSDHRYKDQKIAFLYIDLDRF KSVNDAFGHHIGDQLLIQMANRLHWQLNEKCKLLRIGGDEFLLIAENTDTEEAMQLAEKV LHLIQDSYQISGKEINISASLGIALFPEHGQNVQDLLMNADAAMLMSKEQGRNTYTVFSY STHQQETRSQSKLINDLYKAVEEKQFVLYYQPKFNTNLEICGVEALIRWNHPSLGMLTPH MFIGGAEKTGLIIPMGYWALEQACQQIQEWERSNTQFYPIAVNLSALRFENKKLFSTLEG LLKKYQIQPHHLIIEITESTAMRHIDLSIRACERLRDMGIRVAIDDFGTGHSSFLYLKDL PVDELKIDRGFIVDLKPGSKEEVILESIIHLAKKLGLTVTAEGVETQQQVEILTRLGCQQ FQGYLLGMPVNVGQLIQSQGAHFV >gi|333032574|gb|GL891852.1| GENE 76 80137 - 81153 1310 338 aa, chain - ## HITS:1 COG:PA4694 KEGG:ns NR:ns ## COG: PA4694 COG0059 # Protein_GI_number: 15599888 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Pseudomonas aeruginosa # 1 338 1 338 338 572 83.0 1e-163 MQIFYDKDCDLSIIQSKKVAIIGYGSQGHAHALNLKDSGVDVTVGLRAGSASWKKAENAG LKVAEVPAAVKQADLVMILTPDEFQSQLYRDVIEPNIKEGATLAFAHGFSVLYNQVVPRK DLDVIMVAPKAPGHTVRSEFQRGSGVPDLIAIHQDASGNARNVALSYASGVGGGRTGIIE TSFREETETDLFGEQAVLCGGAVELVKMGFETLVEAGYAPEMAYFECLHELKLIVDLMFE GGIADMNYSVSNNAEYGEYVTGPEVINEQSREAMRNALKRIQSGEYAKMFIQEGALNYPS MTARRRQNAAHGIEQTGAKLRAMMPWIQANKIVDKEKN >gi|333032574|gb|GL891852.1| GENE 77 81186 - 81677 767 163 aa, chain - ## HITS:1 COG:PA4695 KEGG:ns NR:ns ## COG: PA4695 COG0440 # Protein_GI_number: 15599889 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Pseudomonas aeruginosa # 1 163 1 163 163 221 76.0 5e-58 MRHIISVLVENEAGALSRLVGLFSQRNYNIETLNVAPTEDPTLSRLTLTTYGDDHKIEQI TKQLNKLVEVVKVVDLSEGSHIERELMLIKVKALGASRAEIKRTADIFRAQIVDVTPTTY TIQIAGTTEKLDGFIDALAENTILEVVRSGVSGIARGEKVLAI >gi|333032574|gb|GL891852.1| GENE 78 81677 - 83401 1762 574 aa, chain - ## HITS:1 COG:PA4696 KEGG:ns NR:ns ## COG: PA4696 COG0028 # Protein_GI_number: 15599890 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Pseudomonas aeruginosa # 1 573 1 573 574 823 68.0 0 MELLSGGEMLVRALADEGVEHVFGYPGGAVLHIYDALFQQDKINHYLVRHEQAAGHMADA YSRATGKTGVVLVTSGPGATNTVTPIATAYMDSIPMVVLSGQVASHLIGEDAFQETDMVG ISRPIVKHSFQVRHASEIPAIIKKAFYIASSGRPGPVVVDIPKDATNPAEKFAYEYPEKV KMRSYQPPSRGHSGQIRKAIDELLTAKRPVIYTGGGVVQGNASALLTELAHLLGYPVTNT LMGLGGFPGDDPQFIGMLGMHGTYEANMAMHHADVILAIGARFDDRVTNNPAKFCPNSKV IHVDIDPATISKTIMAHIPIVGAVEPVLQEMLAQLKQLNVSKPNPEAIAAWWSQINEWRK VHGLKYENPSDGTMKPQQVVETLYKVTNGDAIITSDVGQHQMFGALYYKYKRPRQWINSG GLGTMGVGLPYAMAAKLAFPDQQVVCITGEASIQMCIQELSTCKQYGLNVKILCLNNRAL GMVKQWQDMNYEGRHSSSYVESLPDFAKLMEAYGHVGIQINHADELESKLAEAMAINDKC VFINVMVDRSEHVYPMQVAGQSMRDMWISKGERI >gi|333032574|gb|GL891852.1| GENE 79 83906 - 84235 193 109 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2979 NR:ns ## KEGG: ABSDF2979 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 93 20 114 130 149 95.0 4e-35 MNLSYLKTSLYTAATTAILLCSSQSQAQQYYKWMDQSGSTHYTTTPPPKGAKHLNKVSTY GSQPLLKNPTSNLEQPSQDKVVQEVTNVAVEKGAPAVPVPPAPSVSAPR >gi|333032574|gb|GL891852.1| GENE 80 84422 - 87046 3026 874 aa, chain + ## HITS:1 COG:PA3987 KEGG:ns NR:ns ## COG: PA3987 COG0495 # Protein_GI_number: 15599182 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 9 873 4 871 873 1159 63.0 0 MTISHIDPEYQANTIEPSVQQDWENRKVFKVADTVEGKHRYILSMFPYPSGKLHMGHVRN YTIGDVISRFYRLKGETVLQPMGWDAFGLPAENAAIAHKVAPAKWTFENIAYMRDQLKKL GLSVDWDREFATCTPEYYHWEQWLFVQLYKKGLIYRKLSTVNWDPVDQTVLANEQVENGR GWRSGALVEKRDIPMYYFRITDYAQELLDDLDTLQDGWPQQVLTMQRNWIGRSTGMEITF PSANTEIYADGLTVYTTRADTLMGVTYVAVAAEHPLALKAAENNPELAAFIEECRMGSVA EADLATAEKKGMATGLFVKHPVTGEELPVWIANYVLMSYGSGAVMAVPAHDERDFEFANK FNLPIKQVIDAKGADDADYSATEWQEWYGSKEGKLVNSGEFDGLEFQAAFDAFLAKLEPQ GLANSKVQFRLRDWGVSRQRYWGCPIPMINCDTCGQVTVPEDQLPVVLPTDVVPDGSGNP LNKMPEFYETKCPCCGGDARRETDTLDTFVESSWYYARYASPDFTGGMVKPEAAKNWLPV NQYIGGVEHAILHLLYARFFHKLMRDEGVVQGNEPFTNLLTQGMVLADTFYREAENGKKT WFNPADIELERDEKGRIISAKYSGDGQEVIIGGQEKMSKSKNNGIDPQAIIDQYGADTAR VFMMFAAPPDQSLEWSDAGVEGANRFLKRVWRLVASFLEKGNSATAIDKANLSKDAQDLR RKTHETIQKVSDDIERRHAFNTAIAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA PFAPHLSQTLLAQFGTDLTEATFPEVDASALTRNTQTIVVQVNGKLRGKLEVSVDISKDE LLAQAKALPEVQQFLTGPTKKEIVVPNKLVNLVV >gi|333032574|gb|GL891852.1| GENE 81 87074 - 87583 722 169 aa, chain + ## HITS:1 COG:no KEGG:A1S_0540 NR:ns ## KEGG: A1S_0540 # Name: not_defined # Def: putative minor lipoprotein # Organism: A.baumannii # Pathway: not_defined # 1 169 6 174 174 300 100.0 1e-80 MHLAQRLAAVVLTLGLSAGLVGCGFHLKGTNPTATPLVYKKLSLELPAKTDDLETQLKVY LTANGVQLSNDNDAYVLRVLEYTPRRQLLNGKLTEVLLRLTVTFQIEDRQGNKITEPRTL TAARSYQYDLATVNTENQQESYLQRIVIDDLAQQITRQISANRLPKAQP >gi|333032574|gb|GL891852.1| GENE 82 87603 - 88592 864 329 aa, chain + ## HITS:1 COG:NMB0708 KEGG:ns NR:ns ## COG: NMB0708 COG1466 # Protein_GI_number: 15676606 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Neisseria meningitidis MC58 # 19 321 18 330 332 100 23.0 3e-21 MKLDYLQALKRIPEARGAWILHGQEPLLEQNLLDTFRKSWQQQDIERQRYDISSVSDWKN VFNALNSLSLFSQQLAIEVHGNIKPDANGLKQLKSYIQHNETNLLLIVLPKQDSSSLKSA FFQVVEANGVVVALTANYPQDRQRILAAEAEKLEIQLDNDAWQWLMQHHEHNLLAAKNSL MRVRDTFPDQKLIQIEQLYACLQDQSRYTTYDLSDALLEGNLAQSIKIFQYLIGSGEPES LILWTLSKEMRLLMQLFEQPHNALQLGIWKTKVSLYQQALRRLNPQQFLGWSALLLQIDA AIKGMSNENAQHLMQQAIAELCGKTLFIH >gi|333032574|gb|GL891852.1| GENE 83 88700 - 90040 1459 446 aa, chain + ## HITS:1 COG:YPO2999 KEGG:ns NR:ns ## COG: YPO2999 COG0845 # Protein_GI_number: 16123180 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Yersinia pestis # 33 446 35 401 401 271 45.0 1e-72 MPKIKPIKLVIIVVCIAIIAVLAWKFLKPKQQQPQYITAEVTRGDIENNVLATGTLDATK LISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQIA SLNEKQLEYRRQQQMYAQDATPRADLESAEAAYKTAQAQVKALDAQIESAKITRSTAQTN IGYTRIVAPTDGTVVAIVTEEGQTVNANQSAPTIVKIAKLQNMTIKAQVSEADIMKVEKG QQVYFTTLGDETKRYATLRQIEPAPDSISSESNSTTSSTTSSAVYYNALFDVPNTDGKLR IDMTAQVYIVLNSAKNALLVPSSALSSKQFSGQRKQGQSADKASSTPSAERKHQGNGVRL ERLNLTPEQKQLIEQGKATLSVVRVLQADGTTKPTQILVGINNRVNAQVLAGLKQGDQVV IADSSENSAASANSGNNRRRSGPMGM >gi|333032574|gb|GL891852.1| GENE 84 90043 - 92037 1882 664 aa, chain + ## HITS:1 COG:YPO3000_2 KEGG:ns NR:ns ## COG: YPO3000_2 COG0577 # Protein_GI_number: 16123181 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Yersinia pestis # 266 664 5 401 401 464 60.0 1e-130 MTKQALLEVSNLVREFPAGESTIQILKGIDLTIYEGELVAIVGQSGSGKSTLMNILGCLD RPTSGSYKVNGQETGKLEPDQLAQLRREYFGFIFQRYHLLGDLSAEGNVEVPAVYAGVTP ADRKQRATALLTELGLGTKTQNRPSQLSGGQQQRVSIARALMNGGDVILADEPTGALDSH SGVEVMRILRELNAAGHTIILVTHDMQVAKNATRIIEISDGEIISDRPNVPDQSLEEVKS DPDAAPALQNKQKKGKSISAWRSTLDRLSEAFQMALLSMNAHRMRTFLTMLGIIIGIASV VTVVALGNGSQQQILSNISSLGTNTITVFQGRGFGDNSKTANFKTLVPADADALMTQPYV SAVSPMVSTSKTMRYQQNEANATINGVSNDYFDVKGLVFKDGQTFDQRSVRDRSQDVVID TNTQKQFFSDGTNPIGQVVLLGSVPARIIGIVEPQTSGMGSDDTLNVYMPYTTVMSRMLG QAHVRNIIVRINDKYSTSAAENAIVNLLTQRHGAQDIFTMNSDSIRQTIEKTTSTMTLLV SAIAVISLVVGGIGVMNIMLVSVTERTQEIGVRMAVGARQSDILQQFLIEAILVCLIGGV LGVLLSLGLGQLINKFAGGNFAVAYSTTSIVAAFVCSTLIGVVFGFLPAKNAAKLDPVAA LSRE >gi|333032574|gb|GL891852.1| GENE 85 92048 - 93454 407 468 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 49 460 35 454 460 161 26 2e-38 MSFSMTKLSAALLLTSSLVGCAAVVKTPYQAPAVQVPGSFQYDKAKAKTASVEQYSDRWW TLFGDAQLNQLVTNVLERNSDLAVAGITLKQARLQADLTANKQGLRTNSSVSTGHSFDLN SGDDSAKGLSMSAGVSYELDLFGKLARQTEASKWEALATEQDLQATGQSLIATTAKLYWQ LGYLNERYATAQQSLATSQKLYQLVQTQYKAGAVSGLDLTQAEQSVQSQKASLSQIEQQL VETRTAIAVLLHEPVQQLNIQEPQRLPRTALPAIGAGLPADILSRRPDLQAAELRLRKAL ATKDATKASYYPSISLTSSLGSSSTSLTELLRNPALTLGASLSLPFLQYNDMKKDIAISN LDYEKAIIQYRQTLYQAFADVENALSSRTELDKQVALQERNVELAEKTERLTEVRYRYGA VALKTLLDAQQTTRTARLSLVETKQSQYNAYVTLMQALGGSPVKELPQ >gi|333032574|gb|GL891852.1| GENE 86 93524 - 94327 1073 267 aa, chain - ## HITS:1 COG:PA1806 KEGG:ns NR:ns ## COG: PA1806 COG0623 # Protein_GI_number: 15597003 # Func_class: I Lipid transport and metabolism # Function: Enoyl-[acyl-carrier-protein] reductase (NADH) # Organism: Pseudomonas aeruginosa # 4 267 2 265 265 365 70.0 1e-101 MTQGLLAGKRFLIAGVASKLSIAYGIAQALHREGAELAFTYPNEKLKKRVDEFAEQFGSK LVFPCDVAVDAEIDNAFAELAKHWDGVDGVVHSIGFAPAHTLDGDFTDVTDRDGFKIAHD ISAYSFVAMARAAKPLLQARQGCLLTLTYQGSERVMPNYNVMGMAKASLEAGVRYLASSL GVDGIRVNAISAGPIRTLAASGIKSFRKMLDANEKVAPLKRNVTIEEVGNAALFLCSPWA SGITGEILYVDAGFNTVGMSQSMMDDE >gi|333032574|gb|GL891852.1| GENE 87 94464 - 95195 778 243 aa, chain - ## HITS:1 COG:XF2760 KEGG:ns NR:ns ## COG: XF2760 COG4760 # Protein_GI_number: 15839349 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Xylella fastidiosa 9a5c # 21 237 29 246 253 139 42.0 5e-33 MQSNNPILTRVETVSDYSQPMTVQGAIQKSVMLTIIAAAVGVALFFYAAFTANVGIAYAA SIVGAIGGLVLALITTFKPTTAPTLAIPYALFEGAFLGGISFTFQLKYPGVPLQALLATF VTTLVMFGLYKFQIIRATEKFKSVVISASLAIFIVFIVQMVMRLAFGSSIPYIFESNWLG IGFAAFVAVIASLNLILDFDLIETNAAYRAPKFMEWLCGIALLATLVWMYISFLRLLGLL SDD >gi|333032574|gb|GL891852.1| GENE 88 95351 - 95917 618 188 aa, chain - ## HITS:1 COG:PA4951 KEGG:ns NR:ns ## COG: PA4951 COG1949 # Protein_GI_number: 15600144 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Pseudomonas aeruginosa # 9 179 7 177 180 248 67.0 6e-66 MSSTLNTRLIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAIHQPDRILNAMD EWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCGNSICQDRRFLHRL MPELEQYFHYRNLDVSTVKELSKRWRPEIMSGLKKNASHLAMDDIRDSISELKYYREYFF IMNTDGKD >gi|333032574|gb|GL891852.1| GENE 89 96043 - 97101 1214 352 aa, chain + ## HITS:1 COG:HI1714 KEGG:ns NR:ns ## COG: HI1714 COG1162 # Protein_GI_number: 16273601 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Haemophilus influenzae # 6 351 3 340 346 262 41.0 7e-70 MALIRKRRLTEQQQRRIEKQHKTRQEEVDTSQDLDGLVVQHYGRQLEVQALSVPDHHPEK PQVAEGEPEPFWKPIELNSVWRCHTRTNLELLVTGDRVKWQADPNTGLGIITAIHPRTSL LTRPDRYHKVKPVAANISLIVIVFAPLPEPAPTLIDRYLVACADANIPALLVLNKSDLLT ENDPILDMLKEYENLGYEVMICHSKGDISALSQRLDGETVAFVGQSGVGKSSLINVLIPD AEQKTNIISENSALGQHTTTSTRLINFGRNGALIDSPGIREFGLWHLDLDKIRMGFPEIE AHLGSCQFRNCTHTHEKNCGLKQAVEAGEILPRRLDSFLRLIDEIQEAQQKN >gi|333032574|gb|GL891852.1| GENE 90 97199 - 97615 372 138 aa, chain + ## HITS:1 COG:XF1800 KEGG:ns NR:ns ## COG: XF1800 COG0607 # Protein_GI_number: 15838400 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Xylella fastidiosa 9a5c # 2 135 19 160 161 80 34.0 7e-16 MERWLEFMGNHPILFGTLGVLIVLFFIFEGQRNGRKISPQSLGILVKAKNALLIDLRDSK DFREGHISGSRNIPYSQIASHADELKASDRPLVFICNLGQVAGSALQKVAHHDSYRLDGG ISNWKAQGLPLVKSKPKA >gi|333032574|gb|GL891852.1| GENE 91 97627 - 97884 370 85 aa, chain + ## HITS:1 COG:RSc0355 KEGG:ns NR:ns ## COG: RSc0355 COG0695 # Protein_GI_number: 17545074 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Ralstonia solanacearum # 3 85 2 84 85 100 59.0 6e-22 MAANVIVYSTSVCPYCVRAKQLLERKGVAYKEVNLSVEAPEVRAELMQRTNHRTVPQIFI NDQFIGGFDQLYALEREGKLDELLA >gi|333032574|gb|GL891852.1| GENE 92 97912 - 98370 598 152 aa, chain + ## HITS:1 COG:YPO0067 KEGG:ns NR:ns ## COG: YPO0067 COG1952 # Protein_GI_number: 16120418 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecB # Organism: Yersinia pestis # 1 150 1 151 158 139 48.0 1e-33 MSEEQQVQPQLALERIYTKDISFEVPGAQVFTKQWQPELNINLSSAAEKIDPTHFEVSLK VVVQANNDNETAFIVDVTQSGIFLIDNIEEDRLPYILGAYCPNILFPFLREAVNDLVTKG SFPQLLLTPINFDAEFEANMQRAQAAAVEGQA >gi|333032574|gb|GL891852.1| GENE 93 98439 - 99095 618 218 aa, chain - ## HITS:1 COG:CAC2006 KEGG:ns NR:ns ## COG: CAC2006 COG2091 # Protein_GI_number: 15895276 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Clostridium acetobutylicum # 45 166 73 196 232 70 33.0 2e-12 MSKRKIEVYTQALSQLLLKSKQDFPDFRSFNHYKKQQIQSVRNRLIAEKLQFNSTELEFA KHEHGKPYLLNHTLHFNHSHSQQYYALAMSEHVKDIGVDVEELDRKVRLDSLAQHAFHPD EYATWQSLEQDREYWFKVWTTKEAVLKASGLGIRLDLNTLNTQAHPTNHGGLCSHELIGT FAYQNFVLGNMILTVAWRSEQSCRGFQFPSIQIHSLDR >gi|333032574|gb|GL891852.1| GENE 94 99120 - 99554 485 144 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00535 NR:ns ## KEGG: ACICU_00535 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 144 1 144 144 244 100.0 5e-64 MLNKKLLFVAMLSAGFTATVQAGDEVHQLNFKEAVDRAVADGTLDGSVKFYLKGTKSGGK IIQKDAVTNKKTNGFGKSAATSCDWVLRSALIQMQNNAKAQGANAVTNIVSYFKANETTS TTTYDCYKGAMMAGVALKGDVVKF >gi|333032574|gb|GL891852.1| GENE 95 99566 - 100792 1202 408 aa, chain - ## HITS:1 COG:ECs4341 KEGG:ns NR:ns ## COG: ECs4341 COG0304 # Protein_GI_number: 15833595 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 2 405 3 407 409 483 58.0 1e-136 MKRVVVTGMAGITSLGETADDIFARFEAGKSGIRYMPEWEQYVDLRTKLAGPVETFHIPK HFNRKVTRGMGRVALMSVVCAETALQNAGLLGHEILSSGEAGVAFGSSAGSVDAVGEFAS MLLHQSMSKINATTYIRMMAHTSAVNMTVYFGLKGLTLPTSSACTSGSMAIGQAYEAIKY GKQQVMIAGGAEELSAAGAAVFDVLFATSGMNDQPEKTPRPFDAKRDGLVIGEGAGCLIL EEYEHAKARGAHIYAEVIGYGSNTDGQHVTRPESEMMGRCMELALKDASVEAKDIAYVNA HGTSTDQGDVAESQATAKVLGYKPISSLKSYFGHTLGACGAIEAWLSIEMMNRGRFIPTL NLDEIDSLCGELDYIVQQPRNLDADIIMSNNFAFGGINTSLIFKRVKQ >gi|333032574|gb|GL891852.1| GENE 96 100792 - 101517 205 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 3 238 4 238 242 83 27 4e-15 MTRRILVTGSSRGIGKAIALQLAKAGFDVTVHARSRQAEAEQVVQEIQALGQNSHYLMFD VNERQTVQQILEQDVEQHGGFYGVVLNAGLTHDGAFPALTDQDWDEVISTSLDGFYNVLK PLIMPMIHLRKGGRIVTLSSVSGIMGNRGQVNYSAAKAGLIGATKALALELAKRKITVNC VAPGLIETEMVTDEVKEHALKMIPLQRMGQVDEVASVVKFLCSDEASYVTRQVISVNGGL I >gi|333032574|gb|GL891852.1| GENE 97 101541 - 101966 466 141 aa, chain - ## HITS:1 COG:ECs4339 KEGG:ns NR:ns ## COG: ECs4339 COG4706 # Protein_GI_number: 15833593 # Func_class: I Lipid transport and metabolism # Function: Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase # Organism: Escherichia coli O157:H7 # 8 136 10 141 154 73 30.0 1e-13 MKLDAIQYIPHEQPMVFIDHLTEVAEGRAQAELTITPELMFCEAEGLPTWASIEIMAQTI SAYSGWQGQQSKQAPKVGFLLGTRKLNLPIPYFSLGSQLIIQIEQQYFHEGLGQFSCEIQ YAEHCIQATLSVFEPTESPFE >gi|333032574|gb|GL891852.1| GENE 98 101966 - 103168 1240 400 aa, chain - ## HITS:1 COG:ECs4338 KEGG:ns NR:ns ## COG: ECs4338 COG0304 # Protein_GI_number: 15833592 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Escherichia coli O157:H7 # 68 397 57 386 389 263 44.0 5e-70 MKHLPSENAAPMAVGIQFSVGLSALGCELNQIKQALQQPQQTLSLRDDLIADRDVWVGQY THPLCSSVPDAMRSVDSRNLRFALTALSKIETELKAYTASFENKRLAIVVGTSTSGIADN ELLLKQYFQGQTDLSISHYPQEMSCLAKALQQYLGWEGPAYTISTACSSSAKALAAGQRL LHADLADVVLVGGVDTLCKLTLNGFNSLESLSAHICQPCGISRDGINIGEAAAFFVLSKE QAPVMLMGAGETMDAWHISAPHPEGKGAALAMQRALDMAHISAQEVGYINLHGTATPQND AMEIKAVRQVFGVYQVALSSTKHKTGHCLGAAGAIEAFICEQVLKDQSWLPLHQNVEIDP DLVDQNYVQEAELTQPIRYVMSNSFAFGGSNISLVFGVKP >gi|333032574|gb|GL891852.1| GENE 99 103165 - 103710 453 181 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00530 NR:ns ## KEGG: ACICU_00530 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 181 1 181 181 290 100.0 2e-77 MQRKWATILLSSLIFLNGCQIMPHAKGLQSPLWQAQTYQRQDQVEVQWKQQSFSFLLYQQ QKGAVLDMVALSLTGQQLFKLQFDGHRVHVEQRIDQMRLLPFEFVVRDLLFATYPQFSHL GQQAVEMKQQADKQVVYIEKQPVLQLKQGQGSIELINEQVPYTMMLSSIENTLQTEESPT P >gi|333032574|gb|GL891852.1| GENE 100 103713 - 105008 1384 431 aa, chain - ## HITS:1 COG:RSp0354 KEGG:ns NR:ns ## COG: RSp0354 COG0644 # Protein_GI_number: 17548575 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Ralstonia solanacearum # 5 420 12 415 419 417 53.0 1e-116 MSTIEKIDVVIIGAGPSGSSAAALLRKKGYTVTVIEKQHFPRFSIGESLLPQSMVFLEEA GLLETVREHVEQYAFQFKNGAAFLRGKQRSFYDFTEKFTDGPGTTWQVRRADFDDLLAKQ AQAYGADIRFGHEVLDVDVASEQPVLTVLDKEQQRYKIQTKFLLDASGFGRILPKLLDLE SPSNFPVRRALFTHIEDGITDDPEFDRNKILITVHEKDHRAWYWLIPFADGRASFGVVAE QDFFDKYMVENAEDNEPEAMFKRILADEPSLSHVLRRAKFDTPVRTLVGYSANVKHLAGH NYALLGNAGEFLDPVFSSGVTIALKSSSLAVPLVERVLQGQQVDWLEEYEKPLRRGIQVF RAYVESWYEDEFQDVVFSQNQNEGIRRMISSLLAGYAWDEKNPIHKNAKRRLSTLAEYCR EGLAQEQVLEG >gi|333032574|gb|GL891852.1| GENE 101 105038 - 107353 1542 771 aa, chain - ## HITS:1 COG:RSp0362 KEGG:ns NR:ns ## COG: RSp0362 COG4258 # Protein_GI_number: 17548583 # Func_class: R General function prediction only # Function: Predicted exporter # Organism: Ralstonia solanacearum # 4 758 14 798 805 254 27.0 5e-67 MRFSNWQNKFTALWLIALLLVAVGLGVTWLNKDIHIQTNIFALLPKVQQDPELARTQQYM NEQLNNKVFVVVDAKDEAAIQQATHFLKAQAKQSALWQPLKPQLDFDQFAKQLYQHRAGL LSTQDQALLQKKDYAALTEQSLMQMMSPGMPVTAESLKQDPLLLFPRYAMQLATPSQQDI EMEQGFATIHHEQGISRLFVLQLTQSPYNIDYQEQTSTWIEQTKQKLAAMGLKSHWTGTI LFSNFGTQSAKQEISTIGVGSTLGLIFLVWFGFRSLRPLATEFIAVSTGSFVAFAVTHWV FGEIHLMTLVFGASLIGVCVDFSFYFMAMQSQHRKLGGFQILKPLLPSLFMGLMTTLVAY IFLSFTPFPGFKQIAVFSIVGLTAAWISSVLLLPRLPALNAQPAIQALSWIGQARLWFQQ RTKVRSGLIAIILAVGTSSLFYLKSNDDIRNLQGMDASLKLQDQAVREQFGQQQSSDYFV VRAASANEMQQQEQQLIGQLQQLQTNGKISAFQALGQWVPPLAEQQNNLQLLRNIPKATL QQYAQSMGLNVTDVLQWQQQLAAQPLLDFSVFKDHPLAFLQPQANERLVMVTGVKQPDAL KQLQNEHIHFQQPITAMSQMFAEHRVQAQHLLIYALIGLAVGLALIYGLSSIVPLVLPVS LALLSTFAVQAWLGVEINLFSIMATFLIIGIGVDYAIFYRHGHDHPQVVGMALFLCMMST LLGFGLLSFSHTYAIHCFGLTVLFGVIFSFIYATLLTPADEKHIVNLQDHS >gi|333032574|gb|GL891852.1| GENE 102 107328 - 107957 552 209 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00527 NR:ns ## KEGG: ACICU_00527 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 209 1 209 209 343 100.0 3e-93 MSKFIKTLGLGAAVWMSSLSAVYAAPTQIIQIFQQLSQSPTVRADFEQQKKLPSLNKTFV SNGSLLFSKSYGVAWQIKRPVQADLIVTPTKLVQKTQRTFSQIQVDQSPYSSVATLFLQL MSGNEQALAKNFNVVSANYSPAGWSMSLTPKSSLFKKLFVRVDAQGQQYVNQIVITEKAN NLTTIRFSHQTSQPTTLTAAEHAIFQLAK >gi|333032574|gb|GL891852.1| GENE 103 107957 - 108385 417 142 aa, chain - ## HITS:1 COG:ECs4334 KEGG:ns NR:ns ## COG: ECs4334 COG0824 # Protein_GI_number: 15833588 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Escherichia coli O157:H7 # 3 130 9 136 140 171 60.0 4e-43 MHADVIIEIPFHDVDTMNVVWHGHYLKYFEIARCKLLDQFHYNYMQMKESGYAWPVIESH VRYAYGIEFEQKIRVRAILKEWENRLKIDYLIFDAESGKRLTKGYTTQVAVNIEAREMCF QSPQVLFDRLNAWSEFQPKRNA >gi|333032574|gb|GL891852.1| GENE 104 108395 - 109930 1852 511 aa, chain - ## HITS:1 COG:RSp0365 KEGG:ns NR:ns ## COG: RSp0365 COG2986 # Protein_GI_number: 17548586 # Func_class: E Amino acid transport and metabolism # Function: Histidine ammonia-lyase # Organism: Ralstonia solanacearum # 7 494 22 510 528 533 55.0 1e-151 MRVLTVGEQPLSIEDVVSVARGECQVALPETSEWRELIQKGADFLDQLLEEEGVIYGVTT GYGDSCLVEVPLHQVNELPLHLSRFHGCGLGENLDVITARAVVVTRLCSLARGYSGVSIA LLERLVWLLNENVIPVIPSEGSVGASGDLTPLSYIAGTLVGERDVYIDGQIVPVAQVYAE KNMLPLTLRPKEGLALMNGTAVMTAIACLNYKKAEQIALASTLITALNVLALEGNPSHFD EVLFAQKPHPGQQHIAKQLRDWLNSEVQTAHQSPRLQDRYSLRCAPHIIGVFEDSKVWLR QFIENELNSSNDNPLIDPVGMRVLHGGHFYGGHIAQAMDSLKIMIANIADLMDRQIAQLV DHKMNHGLPRNLTGATAERLPLNHGFKAVQIGVSAWTAEALKNTLAASIFSRSTECHNQD KVSMGTIAARDASRVITLTQQVIAALCCASVQAIHLKGLTTQLSPTLQTFMQWTLQSFAF VEEDRPLQTELQQIVNRLDQLELFNQPEFMG >gi|333032574|gb|GL891852.1| GENE 105 109932 - 110807 599 291 aa, chain - ## HITS:1 COG:RSp0366_2 KEGG:ns NR:ns ## COG: RSp0366_2 COG4261 # Protein_GI_number: 17548587 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Ralstonia solanacearum # 2 291 12 303 310 187 34.0 2e-47 MLPLMLMLWFYRFGGRWLCKLVMYFVIMWYWLFATTARQASLLYLQKLHHFAGSKSPFNY QPNWSNSYAHFMQFGECILDKIEGWLGNIPEQELQVFGHENFSQHYQKGALIIVSHFGNI ELLRAIKSEHPQKINVLVYQKHATKFNEFLKKINDKADVCLLSVDELGIETAMLLQDKMQ QGEWVIVAADRVPVQSDRVQHVDFLGESAAFPQGAWILANLLKVPVIAVFCYRVQQQFQV HIHSIAEQINLPRANRIESMQTITKTYVAVLEQHCLRAPYQWFNFYNFWTK >gi|333032574|gb|GL891852.1| GENE 106 110861 - 111601 630 246 aa, chain - ## HITS:1 COG:RSp0366_1 KEGG:ns NR:ns ## COG: RSp0366_1 COG0463 # Protein_GI_number: 17548587 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Ralstonia solanacearum # 8 243 6 242 257 258 49.0 6e-69 MQSNYGFVVPVYNHPHYLADLISYLDSFHLPIVLVNDGSDDACSQILKALAEQYSQIHLI EHEVNKGKGQAVMTGLRAAYELGLSHALQLDSDGQHCWDDIPKFIEQSHQHPDAMVIGQP YFDASIPKKRLYGRYITHFWVWLNSLSFEIKDSMCGFRVYPLESTIKVLNSAKFQPRMGF DSEILVRLKWENTPFINVPTPVVYPEQGISHFHAWRDNLGLSKAHATLFMGMLIRLPKLL KQKLQG >gi|333032574|gb|GL891852.1| GENE 107 111604 - 113211 1196 535 aa, chain - ## HITS:1 COG:RSp0367_1 KEGG:ns NR:ns ## COG: RSp0367_1 COG0365 # Protein_GI_number: 17548588 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Ralstonia solanacearum # 31 407 50 436 438 187 34.0 3e-47 GVIYFYRVQSQFWQDVALQAAAIAQMENLTWALWEADSYEFLVLFFAALLAKKQILLPPN RVRELEQDFSAQQIYFLKRQEIGEVVPLSLTLDDTFLEQAQLYFYTSGSTGEPKKIPRTL RQLLNEVQGLSQSFSFDEHATAIATVSHQHIYGLLFKLLLPLARGRSFYNPQMAFPEDVV QAQKQLETMGLSNYLISSPALLKRWTTDVVLQHCQMVFSSGGKLESDVRPLLNRPIIEVL GSSETGGIAHRAKDEDAWTAFSNVAIRIEDQQLMVKSNHAYENDWITTGDGAAWTDATCQ IFKLLGRTDRIVKLEEKRLSLDAIEQSIQALDVVKQCHVLVFEHEQRQMLGCIVVLTEQA REQLQQQGKSAFVSHLKQQLKDGLETIAIPRQWRFLSQLPQNTQSKLNKNYLKTLFKPML QPVVLSQSQNSDDHIWELEFPPELACFKGHFPTQPIYPGVGQIGFLQHFAKSIWSDLSWC QGYEQLKFQNLIRPYAVVQLKLARKEHKVSFELRDSEHILASGRLLFALQTEVED Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:52:54 2011 Seq name: gi|333032573|gb|GL891853.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld72, whole genome shotgun sequence Length of sequence - 20204 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 10, operones - 5 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 123 - 182 7.3 1 1 Op 1 3/0.000 + CDS 205 - 627 510 ## COG1522 Transcriptional regulators + Prom 768 - 827 8.4 2 1 Op 2 . + CDS 947 - 2377 1821 ## COG1012 NAD-dependent aldehyde dehydrogenases 3 1 Op 3 . + CDS 2406 - 3176 788 ## COG4922 Uncharacterized protein conserved in bacteria 4 1 Op 4 . + CDS 3236 - 3955 704 ## COG2186 Transcriptional regulators 5 1 Op 5 . + CDS 4021 - 4728 631 ## ACICU_01130 hypothetical protein + Prom 4762 - 4821 1.8 6 2 Op 1 2/0.000 + CDS 4923 - 6254 944 ## COG0531 Amino acid transporters 7 2 Op 2 . + CDS 6274 - 7719 1535 ## COG0665 Glycine/D-amino acid oxidases (deaminating) + Term 7747 - 7782 4.4 + Prom 7771 - 7830 4.8 8 3 Tu 1 . + CDS 7927 - 9222 1127 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 9234 - 9268 0.5 + Prom 9420 - 9479 6.7 9 4 Tu 1 . + CDS 9604 - 9963 473 ## AOLE_13935 hypothetical protein + Prom 10071 - 10130 6.5 10 5 Tu 1 . + CDS 10202 - 10672 451 ## AOLE_13960 hypothetical protein + Term 10695 - 10734 2.7 - Term 10687 - 10718 3.1 11 6 Op 1 . - CDS 10868 - 11053 123 ## ACICU_01124 hypothetical protein 12 6 Op 2 . - CDS 11054 - 11299 150 ## ACICU_01123 hypothetical protein - Prom 11375 - 11434 3.9 - Term 11321 - 11359 -0.4 13 7 Tu 1 . - CDS 11457 - 11708 122 ## ACICU_01122 hypothetical protein - Prom 11739 - 11798 5.0 - Term 11745 - 11783 3.1 14 8 Op 1 3/0.000 - CDS 11851 - 12330 370 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 12431 - 12490 10.5 15 8 Op 2 . - CDS 12502 - 13227 521 ## COG0790 FOG: TPR repeat, SEL1 subfamily 16 8 Op 3 . - CDS 13236 - 13409 110 ## gi|332874100|ref|ZP_08442034.1| hypothetical protein HMPREF0022_01646 - Prom 13589 - 13648 9.5 + Prom 13402 - 13461 9.0 17 9 Tu 1 . + CDS 13615 - 14472 809 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Term 14354 - 14402 2.2 18 10 Op 1 . - CDS 14500 - 19197 4069 ## COG3209 Rhs family protein 19 10 Op 2 . - CDS 19268 - 20203 871 ## AB57_1158 rhs element Vgr protein, putative Predicted protein(s) >gi|333032573|gb|GL891853.1| GENE 1 205 - 627 510 140 aa, chain + ## HITS:1 COG:RSp0482 KEGG:ns NR:ns ## COG: RSp0482 COG1522 # Protein_GI_number: 17548703 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 1 139 6 144 145 131 49.0 3e-31 MDNIDQIILGLLKDNARMSVTELAEKVHVSRATIKKRMEYLESSGIITGYTVRFKPNAER NVIRAWMSIMVEGTKAQSVIKELRLESAVECLHKTNGKWDILVELRSDTLENFDKVLERI RNISGIYNSETSILLASHKT >gi|333032573|gb|GL891853.1| GENE 2 947 - 2377 1821 476 aa, chain + ## HITS:1 COG:STM1597 KEGG:ns NR:ns ## COG: STM1597 COG1012 # Protein_GI_number: 16764941 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 5 472 9 478 481 441 48.0 1e-123 MAKTQLQHFINGEYVASKGNDFFDLVSPVTGEVYAQSPNATEAEVDAAYAAAKEAFKIWG RSTPSTRQKALLNLADAIEANADRLIEAQSRNTGQLKHLIASEEVGASADQVRFFAGAAR LLDGTATGEYLEGLTSSIRREPVGVVGQVTPWNYPLMMAVWKIAPALAAGNTVVLKPSDT TPESTLLLAEIAAPFFPKGAFNVVLGQAQVGSKVVSHKTPALVSITGSVRAGLQVAASAA ANLAKAHLELGGKAPVLVFEDADLDKAVEMIALTGYFNAGQDCTAATRVIVAESVHDEFL AKLVEAAKNTRFGEPDDQDALYGPLNNANQLKNVKAFIDNLPAHAKVETGGKQADRPGFY FEPTVISGLKQHDEAIQNEIFGPVITVQKFTDENDAIEKANDVEYGLASSVWTKDHARAT RLSRELDFGTVWINTHIPLTAEMPHGGFKKSGYGKDLSGYGFEEYTRVKHVMSSNE >gi|333032573|gb|GL891853.1| GENE 3 2406 - 3176 788 256 aa, chain + ## HITS:1 COG:SP1862 KEGG:ns NR:ns ## COG: SP1862 COG4922 # Protein_GI_number: 15901690 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 32 247 31 246 254 82 28.0 8e-16 MNKQEMKDLVTKAHHELFNLHDTTALDRYFSEDFIEHSPLVANGISGLRQLVEDCPDMQH EAVRVLADGDLVAIHGRFQGLDENPLVGFDIYRVKDGKIVEHWDGLVAEAAPNVSGRTQL DGPTEIVTHHDPEKNREIVTSFFKKSLIDGNYEAFKEYTDGDQFIQHSPDIGDGVKAVID FLNNIRNEGQGLVYSKTHRSIADGQFVLTHSEGSIAGNRHAYFELWRVDNGKIVELWDAI PAVPEDEQAVHGYGVF >gi|333032573|gb|GL891853.1| GENE 4 3236 - 3955 704 239 aa, chain + ## HITS:1 COG:AGc1182 KEGG:ns NR:ns ## COG: AGc1182 COG2186 # Protein_GI_number: 15888004 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 146 5 143 257 67 31.0 3e-11 MSAYTIIFAPIAQATRSEQVVERLENAIISGLLKSNEQLPNEADLARLMGVSPITVREAL NTLRVKGLIDTRRGRNGGSFVCELPSDLLLNQHPLRQASNEYLADLGEFHSAILSHSAYL AAQRTTEYELNKIKELIDQFEQAVEADTRAQLDLRCLLTLTSFAQSSRLANQELTIQAEW APLIAVLYQDDDFHREVVKQYHHLLSSFIDNNENEAVIQARRIVSMLTDQMLRYKLSSE >gi|333032573|gb|GL891853.1| GENE 5 4021 - 4728 631 235 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01130 NR:ns ## KEGG: ACICU_01130 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 235 1 235 235 445 100.0 1e-124 MTQHLDVEELQNLLKTVVDETTSITETLASKASKILSKHASEKNADIKLSTSERAALQKE IKKALSQSHYSQGTGFASYSPATQDEQDYWTLEWWYKKEDQLQQAKLENYQNAQRFLDFR SFEWFHKPAQNKSPCIHGPYVDYICNGAYTITIAHPVMIHDHFIGVIATDILVSALEKLL MPKLKNIKQKAVIMNDSSRVITSNDISIRTGTLFKDKTDQQFFSQPCQSFQLVVI >gi|333032573|gb|GL891853.1| GENE 6 4923 - 6254 944 443 aa, chain + ## HITS:1 COG:ECs1873 KEGG:ns NR:ns ## COG: ECs1873 COG0531 # Protein_GI_number: 15831127 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Escherichia coli O157:H7 # 9 423 38 452 479 419 52.0 1e-117 MENKASSLKKLSLWQVTIIGIAYMTPMTVFDTFGIVSGITNGHVPLAYLLALGAMLLTAW SYARFSQNSEKSGSAYSYTAESLGPKSGFFVGWCSLLDYLLLPLINVLLAAIYLTALIPS LPYWFWVLVSAGLVTLVNCFRIRLLANLSLVFVFAPIILMVIFVYLVVRGIGSTQGYEHV LTLAPLWHGQQSLLPLVAGASVLCFSFLGFDAVTTLSNETKQPTKNIPRAVMLTTLAGGA IFFTAAWFIQLYFPNNVRFHHPSEALPEIVLYVGGALFQSIFLCGQIMNTVASGLASHAS ASRLLYIMGTDNIFPKKYFGTIHSSLGTPFFSVLFVGLISMSAIFLDLAQVVSLISFGAL VAFTAVNFSVFMKFYIKDKQRSGFKNKFLNLFLPLLSVISIICLWLNLDSSSLTFGCFWL ALGILLFIYKTIKKQSIAISNAY >gi|333032573|gb|GL891853.1| GENE 7 6274 - 7719 1535 481 aa, chain + ## HITS:1 COG:ordL KEGG:ns NR:ns ## COG: ordL COG0665 # Protein_GI_number: 16129262 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Escherichia coli K12 # 48 469 3 420 426 209 32.0 7e-54 MKIISKPQLLKDVEYKPSQSLQVGKEWSWLNPKHAKFDATTINGTSVDNPANYYESSLSN WHTFDSLNADIECDVVVIGGGLLGSSTALHLAEQGVDTVLLEKNRIGSAASGRNGGQLTP GLARWEAQEMADRLSYEDAKKLWHFTSTEAMQLIDDISEKYQLNFDRKYGHITAAVHEGH LVGLTQGADARKYLGEDHTRIVGKHELMDFIKSDYYTGGLIDELGGQIHPLALNRGLIYG FCQNGGTVYEQTEVISIEEKEDGIYVHTANAVVKAKKSVVLAVHHASFKLLSEQNNTTIP FYTYVATTAPLELDTKELLPFGHPVYDTQFQIDYYRPVFNNRLLFGGQGTGTCWGPEKTL NYLEHRIHTVFPQIKNLEMDFVWSGTTDLTVNGAVDSRKFGNKFPIYAVHGWSGHGVAQT VRIGKAIANDFIGQSNDFEMLSKIDHQNIIFGRTLAPVVIPLAKSMYGIGAMINPGKMVS F >gi|333032573|gb|GL891853.1| GENE 8 7927 - 9222 1127 431 aa, chain + ## HITS:1 COG:PA3000 KEGG:ns NR:ns ## COG: PA3000 COG1113 # Protein_GI_number: 15598196 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Pseudomonas aeruginosa # 1 424 25 455 469 472 59.0 1e-133 MGGAVGTGLFLGSAQVIQSAGPSIILGYAIVGLVAFLIMRQMGEMIVEEPVVGSFSYFAQ KYWGRFPGFLSGWNYWVVYILVAMTELTAVAKYVHYWWPHIPAWVSVLFFFVLVTCLNLG NVKFYGESEFWLAIIKVAAVISMIVFGLYLLLTAGNDSIASFSNLWQHGGFFPHGFSGLF YMLAFLMFAFGGIELIGMTAAEAENPEKSIPQAINQVIFRILVFYVASLAIIMSLIPWNQ LDLGGLDKSPFVMIFSQLGIGWAAHLLNFIILTAALSVYNSGMYANSRMLYGLAVQGNAP KVFAKVSKQGVPTSAVIFSSILIFGCVLLNYFIPEEALSYLMYMAVAALVLNWAIISFTH LKFKRSMKLENKIAKFPALFSPLSNYIVLTFIGMILYIMWTQGFEKSVIIIPIWIAFMFG LYTILSWKKSL >gi|333032573|gb|GL891853.1| GENE 9 9604 - 9963 473 119 aa, chain + ## HITS:1 COG:no KEGG:AOLE_13935 NR:ns ## KEGG: AOLE_13935 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 119 1 119 119 177 95.0 2e-43 MEKTLQCPKCGSTEIETRDHDKLLKTTGGVLLTAAGTTAGTVGGAATGATVGAAIGTVAG PLGVIVGGTVGTFVGAISAGITGGVVGNIFGKKAGVMIDKNIFQDYRCLKCKYRFKQKK >gi|333032573|gb|GL891853.1| GENE 10 10202 - 10672 451 156 aa, chain + ## HITS:1 COG:no KEGG:AOLE_13960 NR:ns ## KEGG: AOLE_13960 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 156 1 156 156 258 80.0 7e-68 MKKLLLLSLISIFSSHSFAEDNSSIYRGLGTGPEDFLNFQILKQKGFLAKKPNVSRVDYN DIYKLKKPYEFMGQNVLLISDEYMSEYVGCCVSEGWGAVFKQTTNLKLIEKFAKKNQCNI APIETDSTYYGFKISSLPKGNYYELSCRERDLAQSE >gi|333032573|gb|GL891853.1| GENE 11 10868 - 11053 123 61 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01124 NR:ns ## KEGG: ACICU_01124 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 61 1 61 61 110 100.0 1e-23 MLKGQGQGVDTYCLGPNNKINIVNPTFGKIQDYKGGELKITNYNVNTVLYRYYKWGNDLC E >gi|333032573|gb|GL891853.1| GENE 12 11054 - 11299 150 81 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01123 NR:ns ## KEGG: ACICU_01123 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 81 1 81 81 150 100.0 2e-35 MSNLFRYIALFFLFLQVGCSNGVYEQPADKYPFEVKMKALLGDNIEIIDSINKYEAQVSY FEFTKDSRKLDKIVRYLDKDG >gi|333032573|gb|GL891853.1| GENE 13 11457 - 11708 122 83 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01122 NR:ns ## KEGG: ACICU_01122 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 83 1 83 83 148 100.0 9e-35 MSFGITTILLLVGYGSSVYEPPSDKYPFENKMKELLGNQIKIINSLKKAEVQISYFELPK SNNKIESRVSLLEKYGWVLKGKG >gi|333032573|gb|GL891853.1| GENE 14 11851 - 12330 370 159 aa, chain - ## HITS:1 COG:PM1611 KEGG:ns NR:ns ## COG: PM1611 COG0790 # Protein_GI_number: 15603476 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Pasteurella multocida # 32 150 51 168 172 89 42.0 2e-18 MSKYLNIFIFSILVGCNIPDSSANSEFENLKSAAEQGDIRAQSQMGDAYLFGEYDLNVDY KQAINWYQKAADQSDAKSQYNLAIMYLNGYGVKKDLSKSVEYYRKSALQGDADSQLQLGI RYLNGEGVERNIETAKEWFKKAKLSGNQEAGIYLEKMNN >gi|333032573|gb|GL891853.1| GENE 15 12502 - 13227 521 241 aa, chain - ## HITS:1 COG:STM0654 KEGG:ns NR:ns ## COG: STM0654 COG0790 # Protein_GI_number: 16764031 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 27 232 45 250 331 96 32.0 4e-20 MKIFLSIFIFSTLTLVGCDSSNIKVKSSNSELSKYEKDAENGDPVAQYNIGVIYQQGLNG NKVNLDKAVYWFEKAAEQGEEEAKANLGIIYYTEGTKYTNIPKALDTFSELSKKDNRVAI NFLGRMYKDGVGVEQDSNNAFNLFNRAAFLGDLSAQFNLGNMYFNGEGTPLDYEKAAYWY NKAIINGKDGDAAKILAGMYYEGRGVEKNISKSIELLQIAADQGDQEAAKNIEIIKKECS C >gi|333032573|gb|GL891853.1| GENE 16 13236 - 13409 110 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874100|ref|ZP_08442034.1| ## NR: gi|332874100|ref|ZP_08442034.1| hypothetical protein HMPREF0022_01646 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01646 [Acinetobacter baumannii 6014059] # 1 57 1 57 57 100 100.0 2e-20 MIIYILLKIENIISKLHKANSQQSTVDHKLPPAPRIPEAPSKMGYHPLDFQTKACFK >gi|333032573|gb|GL891853.1| GENE 17 13615 - 14472 809 285 aa, chain + ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 42 284 11 287 327 155 37.0 8e-38 MLSKKIFLTVCLLSILSSGCAKSVNQANDNNEQQHSNQNNIDNINVNDIRSKAEKGDPEA QYNLGVMYAEGYKDIQPDILKAIEWYTLSANQGYVNAQYNLGLLYMGNEHIKPDYAKAKY WYEKAAVQGDIPSLNELGNFYSKGLGIKQDYQKAIKYYLDAANAGDSDAQTNLGTMFLHG RGVTQNKEEASQWYLKAAIQGDIDAQYNLGLMYLLGDGIKQDYPQAQKWFLAAANQGESN AQFHLGKIYKDGLGVDKNLSLARTWFEKSAEAGNSYAAQELSKMN >gi|333032573|gb|GL891853.1| GENE 18 14500 - 19197 4069 1565 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 349 1398 240 1254 1364 319 25.0 2e-86 MAKENTQQKEIKKQPAVELAVFNLNSVTDVADLQMVASQVQRYLQVCGNTSLEQIKSKAN ITTVANIFALTGSVLDLMLYATDKKTGDAAVQRGALLAANLIGLFSEPNNEAHARMALRP MFGLMAECLYRENGKIKETDIKRLGLHLNAMIAGDLENFLKETQAKLSSLLTSATTLGVT ILQSMATPATGINAGITTAAGASAEKRDPKLKFTNWAVPLIDLLGKPSQANLTPKIQPNI TSRLQQEATQAIAALSQTLQQQANAGQKYTLAWLLQETLKAIQALENKGNASVPVNQTGE YERHTKGDTLEFVSLQADALNAPPCEGADSQSGKSISYSIGAERVQHADFYLPKIGFSFT RQYNSQMDEFDQSMVGARWMMPFSNMIQQNAKGYLFIDSKGRKHQLPASITFETYEVPYE GITIQPLKNGDLVLNFGGDWTFQFHQFSVGQPYQLIQQFNEKTQEKIDLSYLIFEKVAYL QYVVFQLEHAKHQLKFAFNEQVKIMAVFLDDKAEPLARYEYDIQGNLIKAIDQNGYTRTY EYNNFHQLTRYTDRTGRGQNIRYESTDAKAKAVEEWADDGSFHTKLKWHPRLRQVAVYNA YDVPTYYYFDLNGFTYRTRLADGRESWYSRDGKKRITRQIDFEGRETQQEYNDQDQLVKI VQPNGGVIRFAYDEQDNLVEIKDPEGSIWKREYDENGNLNKEINPLGHITQYKYNNDNQL VEVIDAKGGVKKIQYNELGQMISYTDCSGKSSTWEYDEDGVLTAEQTANNKVVQYFYSIK GRDKGQLQSIIYPDGLKEYFEHDEEGRLLKHTDTKGLVTEYKYNQVGLLEQRIDANRHSV AYQWDKQGRIQKLINQNQAEYLFGYNPYGYLIREQAFDGEEKHYSYNENGRIFQIRQPNI LTQFDYYADGQIASKSFTHLHTGQKQTEQFDYNLNSQLSRASNEVSQIDFYRNALGQLVR EHQHYKIPELKPLTAVLHYEYDELGNLIKTIRPDGHTLNHLVYGSGHIYAIGLNNQEVVS FQRDDLHRETTRLLANGLMQTKQYNDVGLLSSQFIQPEQETQDYLQYQAHRKYHYDKNYL LSQVEDSRLGKLNYQYDPIGRLIAAQSLHKTESFNFDPAGNLIDSDSVLSPAQIKNNLIK SYKGKHYQYDVQGNVTEIIQAGKNLKLTWDNQNRLIRSDNNGLVTEYGYDVFGRRLYKKT AKELTLFGWDGDLMIWESFKSAQTNYTKHYIYEPDSFVPLLQTGYKDFIQLIETPDYQEY QTKPYSIYKDPVWNSTTRKKRADLEQITFYHCDQVGTPQTMTNIRGECVWEILQDTWGAV SQIKALNQDNPFEQNNLRFQGQYYDQETELHYNRYRYYEPHSARYVSKDPIGLSGGINTS AYVSDPTQWIDPRGLASTNSIGSYGSVKSASDTYEKYATSKSLKDVAERYAAGKSVGGSA TAGVGVGIYANYKGNGESTLTMERKVGLGYEYGVFERNYHYGERQVNRGYIEGCAATGES KYCAGSHTDKISPYIYKDEYKSKSKARGITISQGKEMVGNPNGPSIIHGPGHSWDLGAHG FPSTY >gi|333032573|gb|GL891853.1| GENE 19 19268 - 20203 871 311 aa, chain - ## HITS:1 COG:no KEGG:AB57_1158 NR:ns ## KEGG: AB57_1158 # Name: not_defined # Def: rhs element Vgr protein, putative # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 311 754 1064 1064 563 100.0 1e-159 SGLKAVAAQGKVEIQAQADALDVLSKLGITISSTDDKVIISSPKEVKITGGSSQITLNGS GIFPKTGGKFQVNAGQHLFMGGASANASAPELPKAKPMQGALELLRSYGGDNFFKQNSYK VIDSLGKQITGKLDGNGFAQVTGIAPGPAKVVFEKDNTSAWLQSSDFKRNYTWAEPVKSV QGLMKNALEAVGQNTMSQLQNNLLSTDKNSFKNLGKNTLDNLAGQTVAQIKNQVTNTALN TVSKQLNLNLSADQMKSLGQMATNPSQSLEMLKEQGGDFLSDQMTAKLFKTTNQESPIQQ GDLDTFVRSKK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:53:22 2011 Seq name: gi|333032572|gb|GL891854.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld73, whole genome shotgun sequence Length of sequence - 1168 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 87 - 470 346 ## BCAL1162a putative transposase + Prom 768 - 827 2.1 2 2 Tu 1 . + CDS 877 - 1168 77 ## gi|260554172|ref|ZP_05826430.1| transposase Predicted protein(s) >gi|333032572|gb|GL891854.1| GENE 1 87 - 470 346 127 aa, chain + ## HITS:1 COG:no KEGG:BCAL1162a NR:ns ## KEGG: BCAL1162a # Name: not_defined # Def: putative transposase # Organism: B.cenocepacia_J2315 # Pathway: not_defined # 14 123 13 123 127 64 35.0 1e-09 MTTNNQTSIASLAKKRRTYSAEFKQQIVQACKAPDVSIASVALQHGLNTNLVSKWIRLID AKPGNDRSPLPNKPAFIALSCSAPLDPTPTDMLTVQITLPHSKAEIGLKWQVSEISALAE LLKALAT >gi|333032572|gb|GL891854.1| GENE 2 877 - 1168 77 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260554172|ref|ZP_05826430.1| ## NR: gi|260554172|ref|ZP_05826430.1| transposase [Acinetobacter sp. RUH2624] transposase [Acinetobacter sp. RUH2624] # 1 97 1 111 457 150 83.0 3e-35 MNTLPDLSQLTHEQLLEFTRQLAMQHQSLAQSNQELEKSNQQLDAKVQHLSILNQKYEHE LALFKKHKFGSKNEHLTAKQIHLWDEAVEEDIAAVDL Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:53:31 2011 Seq name: gi|333032571|gb|GL891855.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld75, whole genome shotgun sequence Length of sequence - 1209 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 1068 100.0 # CP001182 [D:58162..61068] # 23S ribosomal RNA # Acinetobacter baumannii AB0057 # Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter. Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:53:32 2011 Seq name: gi|333032570|gb|GL891856.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld80, whole genome shotgun sequence Length of sequence - 858 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 263 124 ## AB57_0007 transposase subunit - Prom 287 - 346 3.0 2 1 Op 2 . - CDS 350 - 742 298 ## AB57_0550 transposase 1 Predicted protein(s) >gi|333032570|gb|GL891856.1| GENE 1 2 - 263 124 87 aa, chain - ## HITS:1 COG:no KEGG:AB57_0007 NR:ns ## KEGG: AB57_0007 # Name: not_defined # Def: transposase subunit # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 87 1 87 144 180 100.0 1e-44 MKLYISALQLENGELLLVVSPQFNANAIQDYALRWEIETLFSCLKGRGFNLENTRLTDPR RVKKLIAVLAISFCWCYLTGEWQHDQK >gi|333032570|gb|GL891856.1| GENE 2 350 - 742 298 130 aa, chain - ## HITS:1 COG:no KEGG:AB57_0550 NR:ns ## KEGG: AB57_0550 # Name: not_defined # Def: transposase 1 # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 130 60 189 189 247 100.0 9e-65 MQRFFAGQYFDYRQISQLIFNMFSFDQVQLTLDRTNWKWGKRNINILMLAIVYRGIAIPI LWTLLNKRGNSDTKERIALIQRFIAIFGKDRIVNVFADREFIGEQWFTWLIEQDINFCIR VKKTSLSPII Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:53:40 2011 Seq name: gi|333032569|gb|GL891857.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld85, whole genome shotgun sequence Length of sequence - 14770 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 8, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1719 1180 ## ACICU_00684 hypothetical protein + Prom 2702 - 2761 4.3 2 2 Op 1 . + CDS 2784 - 3143 100 ## ACICU_00686 hypothetical protein 3 2 Op 2 . + CDS 3183 - 4028 386 ## ACICU_00687 hypothetical protein + Term 4088 - 4139 18.5 - Term 4076 - 4127 18.5 4 3 Tu 1 . - CDS 4213 - 6624 2354 ## COG4993 Glucose dehydrogenase - Prom 6859 - 6918 9.7 + Prom 7788 - 7847 4.7 5 4 Tu 1 . + CDS 7929 - 8933 279 ## ACICU_00689 hypothetical protein 6 5 Tu 1 . - CDS 8930 - 9442 88 ## gi|332874120|ref|ZP_08442050.1| conserved domain protein - Prom 9550 - 9609 7.0 + Prom 9637 - 9696 7.9 7 6 Tu 1 . + CDS 9766 - 9945 287 ## ACICU_00690 hypothetical protein + Term 10166 - 10215 -0.3 8 7 Tu 1 . - CDS 10020 - 11300 515 ## ACICU_00691 hypothetical protein - Prom 11322 - 11381 3.6 9 8 Op 1 . - CDS 12026 - 12976 480 ## ACICU_00692 putative transposition protein 10 8 Op 2 . - CDS 12969 - 14297 619 ## COG2801 Transposase and inactivated derivatives Predicted protein(s) >gi|333032569|gb|GL891857.1| GENE 1 3 - 1719 1180 572 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00684 NR:ns ## KEGG: ACICU_00684 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 572 1 572 974 409 100.0 1e-112 MFIKSILSSITSIIPLPENSNTSSNLGNGSGDGLLNGISSGNGEHNYGIGNGIADDASIT APITIPLNLSGNSITLIGNSSSSSVNSSPTTTSNNVNDNDVTNNGNGSTIGSGTGNGSGD GLLNGAASGNGEHNYGIGNGIADDASITAPLSIPINLAGNSITLIGDSSSSSVNNSATNT SNTVNDNDTTYNGNGSGAGNGSGDGLLNGIGSGNGEQNYGIGNGIADDASITAPITLPIN LSGNSITLIGNSSASSVNSSPTTTSNTVNDNDTTYNGNGTGDSGVNALGGSGNGSGDGAG NGIASGNGEHNYGIGNGNGDDVDITAPITGVLNISGNSFTLIGNSSSSSVNTAPTTTSNT VNDNDTIDNGNSGGTGSGSGNGSGDGLLNGAASGNGEHNYGIGNGNGDDVDITAPITGVF NFSGNSFSLIGNSSSSSINTAPTTTTNTVNDNDVTDNGNNGGGLLGGSSGNGSGDGLLNG AASGNGEHNYGIGNGNGDDADFTFPLTGVLNFSGNSLSGFGSSSSESVNVAPTTATNTVN DNDTIDNANTGGLGGGSGNGSGDGLLNGAASG >gi|333032569|gb|GL891857.1| GENE 2 2784 - 3143 100 119 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00686 NR:ns ## KEGG: ACICU_00686 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 63 119 1 57 57 70 100.0 2e-11 MNSDKLGLKKEFLNLYLHAVLAHFTAIVVFILGSKHIVNSYDKLPDFIPLISSYYFNIIM LLMGVFFFFYMLFEVYLKRMIQILNAAKFSAPFYIFSIFGFIGLGVFPFFGAFSSISSL >gi|333032569|gb|GL891857.1| GENE 3 3183 - 4028 386 281 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00687 NR:ns ## KEGG: ACICU_00687 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 281 1 281 281 535 100.0 1e-150 MAEPINFATNFAIKIILSIFGPILKKPIEWITKFLFLDAYKVSTAYRTSRDLQLLWRKDL GGFVNYSINWNQIFLGKQQTNCTLWVKANNDQHYSKVIFCVTASLSNLKYQSVIEIHDLT SKPCVLALPSIPIRNLEWRNGQLYEPYNEFKIELKEVFDKDNTYINLKNNTKSIFNPVDN LGFLQGKKSYVYRWGQWWNLDFLESEKDEFLLTYKAYAFRAKFDKSNNASLFSARAWLLS NRLLLNVFFWSKNIFKAKHLRVAFDKYLKDIEEAAGFKLVD >gi|333032569|gb|GL891857.1| GENE 4 4213 - 6624 2354 803 aa, chain - ## HITS:1 COG:AGl2936 KEGG:ns NR:ns ## COG: AGl2936 COG4993 # Protein_GI_number: 15891579 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 26 801 22 809 809 631 45.0 1e-180 MSTEYTAPSERAGSKVYRFFVILLHVLIALFLIIQGGKLVSLGGSSYYLIAGIAYLLIAI LYTFRKVASLWLSILTFIATVIWAVSEVQVFDFWQYIPRLVVPTVLFVLSLWASRSLITL STEKVTFANRVGLVGFIACVIALISAFFPHGKTLNQVNIAQDRNLTKPTAENPDNWEYFG RSGSGTRFAPYTDITPDNVKNLQIAWTYHTGRPKNIGVDENTPIQIGSTLYSCTPTNIIT ALDGDSGKALWKYDPKAKTAEHITCRGVGYYDATQDKTLSKADLQTPSIQACPQRILTST VDGRLIALNAKTGALCPQFGVNGQVDLLNDMGPTEKSKRYHPTSTPLIAGHVAILGGWVR DITHGEPSGVVRAYDVRTGKLAWAWDVGNSELSGQPKNGFTLETPNMWTIPTYDKDLNLV YLPTGNGPPDYWGGDRNAAKEKFGSAVVAVDATTGKTKWSYQIVHHDVWDYDLPSQPVLY NVTNDKGEQIPALIQTTKMGQIFVLDRRTGQPITKVIEKPVPTTGHAEGEKLSPTQPYSV GMPQIGNDTLREKDMWGISTFDQLNCRIQFKDSAYQGLYTPPSEKPYIEWPSLLGGMNWG GISIDESTGLMFVNDMRMPLRMSLVRKEDMGKYKISTDEVPGFMGTVRPQFAGPYAGVKI DIMQSALGVPCNRPPFGTMSAIDLKTKKLVWQVPLGTAEQLGPLGIKSHLPMPLGMPTLG GPTSTASGLVFFAGTQDYYLRALDSKTGKEVWKAKLPVAAVAAPLIYKSPKTGKQYVVIS AGGASHSKDVGDYIIAFALPDQK >gi|333032569|gb|GL891857.1| GENE 5 7929 - 8933 279 334 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00689 NR:ns ## KEGG: ACICU_00689 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 39 334 1 296 296 547 100.0 1e-154 MKRGYFNNKIKDSIFFKENSKKWVLSIEYSTPIWYDLIMDECEEYKEFYKEILNDQVEAS KDCNEKEFIYFFTSRPKVRFDLSRKIKIGKNIGEIFLNLIINCSEKRKVNIDHDYWRDFK KIIINEKFITFKFDEDVKITWPIHVFLYEYNVELGLESEVHYIGKTKDPVSRTMTREHRG YSDMLYYLLHLKEKRDIFLNVLIFKVSVISPPHNSIGIFSTNSVLDHIPKELEIFVIEYC LIYYFKSSIQKGDMDTSWSKFVNYFRDFQKEGINALYFKLEMKESTEYNNLGTPNLAAKK SHYFSWQLNENGLQMERFYESKDLDEEVFKDFFV >gi|333032569|gb|GL891857.1| GENE 6 8930 - 9442 88 170 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874120|ref|ZP_08442050.1| ## NR: gi|332874120|ref|ZP_08442050.1| conserved domain protein [Acinetobacter baumannii 6014059] Hypothetical protein ABK1_0727 [Acinetobacter baumannii 1656-2] hypothetical protein ABTW07_0721 [Acinetobacter baumannii TCDC-AB0715] conserved domain protein [Acinetobacter baumannii 6014059] # 1 170 1 170 170 261 100.0 1e-68 MQIEILKNLPNILFTTYSPIWLVVWFTSIYQIINITIKIDDLISKKLNNRQYIKTSLNSI LIFFKKLSSALQKSLQLPDDIEPWSKKIPTPVKKFGIYIESSIWFIASLTTTTYFILIAL LTILTKKLLTIPDFLTIFGISAILVVCSRFLYVEGRRCLLKAKNYNKINI >gi|333032569|gb|GL891857.1| GENE 7 9766 - 9945 287 59 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00690 NR:ns ## KEGG: ACICU_00690 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 59 1 59 59 89 100.0 3e-17 MNTEFDPIEFEFDSSDHEAQYNAWFKDKVEASQADQRLGIPQDQVVARLKKRREERNQL >gi|333032569|gb|GL891857.1| GENE 8 10020 - 11300 515 426 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00691 NR:ns ## KEGG: ACICU_00691 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 426 1 426 426 828 100.0 0 MVDWISQRSHQVHPRIQLVPFLIVDTRYFGQYTKKILEQLPVSTELAPEHLFHLLTIKES CQILDICYSTIQRWIENNKLQYVVSKDIPKNRKFLSSRDIEYFLVQKALHPSPKKLKHPP RKDGQRLTITNVAAKLNVHYENIRYLIRTRYLKAEKLLVRFRCAYFINSKDLEEFNEKYI LVGSLAKKLKVIPQNLTEKLASIDIHPISGPHIDGEFNNIFLQESVRHLTKKDIEKIINY PTLTGRYPSFEEQLPKPPPTYLSLNEAAKKLHISPNKTARLVEKGVLEKDTSHNLSISIS IQSLNMLIANLHNPKFISVKQALIQLNCSANWFHEYWVETGFIHIHDFLYWHFVERNELN KVLRLKKSYLTGTEASTLLGMHKSHVTNLESQGLIEPVYFGTPKIIKLFKREDVIKLKEL GYGAIK >gi|333032569|gb|GL891857.1| GENE 9 12026 - 12976 480 316 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00692 NR:ns ## KEGG: ACICU_00692 # Name: not_defined # Def: putative transposition protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 316 1 316 316 628 100.0 1e-178 MNKLDALELSKKLNNMVITSSEFTKAYDGITSCSAQTKAYQKPIGSLLIAEGGLGKMTLS QSILKKNPCYEKQEDGYTKRVVPVFYIQIPSPATVKSVAGMMLKALNDPAPLSGTTAQMT ERLCYLLKLCETELILMDEFHHLFDMQKVSRKMNIDVCNWIKTVTDSTNISSCLIGLPEF APLLQIDSQLARRFPLTFKLSRLNIGSTQSPGTLYGFLSQVEQNIEKRLTLKFLPRLIDP LFVLQIYASTKGYHHYIISLIREAMLFALLADSDVITQQHFSLAWDKGITSYTNMTTQNP FHMDTSKLVQRMKGDH >gi|333032569|gb|GL891857.1| GENE 10 12969 - 14297 619 442 aa, chain - ## HITS:1 COG:mlr6273 KEGG:ns NR:ns ## COG: mlr6273 COG2801 # Protein_GI_number: 13475245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 10 315 127 441 535 125 28.0 1e-28 MLEHDIQENPPSRRTIQRRLKQYDPYKLIKATEGTRIANQTLKAAGRKMKSPFILAIVEI DTHILDIIIIDSTTNLPLGRPYLSCAIDVHTRAIVGYYISMLPPSATTTLALLKNMLLRP SQNLPGGIPSLIVPDNGVEFKNTALSHICNHLKITIQPAQNRNPDNKPHIERFFGTLTFG LIQQLQGTTFSNPEARGDYDSRKHASVTLENLKSYVDEWIHNIYHCSIHSMTGRAPMLFW EDASQSCPPLTISTDEVDIIARRPISRKIHKGQVKFEYLTYFSHALATLEANGLTDVIVM IDELNLEHVYIKHSSIDEVIRADSTEPDYTKNLSLQEHLEIRKELKLVSQADKQRLGKHR VWYARWKLYERIQKDACSKNKKLKQLKLELPQTLKNLLDQDIHTVSQPIDPSASTFISSS EMDLLNQSNLDDDFGTLEFDDE Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:54:31 2011 Seq name: gi|333032568|gb|GL891858.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld86, whole genome shotgun sequence Length of sequence - 10866 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 597 401 ## ABBFA_000559 hypothetical protein 2 1 Op 2 . - CDS 620 - 1510 745 ## ACICU_03154 hypothetical protein - Term 1520 - 1562 6.4 3 2 Op 1 1/0.000 - CDS 1578 - 2504 1186 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 4 2 Op 2 3/0.000 - CDS 2529 - 5279 2877 ## COG1391 Glutamine synthetase adenylyltransferase 5 2 Op 3 . - CDS 5348 - 6682 840 ## COG0642 Signal transduction histidine kinase - Prom 6902 - 6961 5.8 6 3 Tu 1 . - CDS 7868 - 8077 157 ## ACICU_03158 hypothetical protein - Prom 8221 - 8280 7.0 + Prom 8287 - 8346 3.9 7 4 Tu 1 . + CDS 8373 - 9785 1001 ## COG4928 Predicted P-loop ATPase + Term 9845 - 9897 18.1 - Term 9831 - 9883 18.1 8 5 Tu 1 . - CDS 9976 - 10866 400 ## ACICU_03160 hypothetical protein Predicted protein(s) >gi|333032568|gb|GL891858.1| GENE 1 3 - 597 401 198 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000559 NR:ns ## KEGG: ABBFA_000559 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 190 1 190 342 392 99.0 1e-108 MKILHIANFGFNKQGAHFYCTDRKISAGLIENGHFVYDFSFRDMARMGTIFKTKKLGAKW ANKEVLKVVNNIEPDLVLIGHSDLMSPDVLRQIKESYPNTKIAFWYVDPLYLENKLDFVK AFSPYLDAIFCTTGGEYLQKLKQPHLSVAYMPNVGHRNVETLQQFSNSKTDKTFIFCGVV YKEPEREKFFSVHDKFHR >gi|333032568|gb|GL891858.1| GENE 2 620 - 1510 745 296 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03154 NR:ns ## KEGG: ACICU_03154 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 296 1 296 296 593 100.0 1e-168 MHIVYVSDGKAGHRSQALGLFQAMQRQQANATFEEVSINDLPVMSLIKALFSSKKSLFQQ APDFIFGVGSHTHFRVWLLGKIFKKAKTIILMKPSLPIGCFDYAVMPEHDGIPANNRVIV TRGALNPIRNEKRHQASRILIALGGSSKRHQWNQEKVLLSVQKIVENNPDAEIILTTSRR TPAEFIDILRQQSFAQHLQIFPVEQTPQGWIFEEMQKAEAVWVTEDSVSMVFEALTAGCR VGVIAIDRLKDDRITHSIDQMIESQLISQNTCVVQLPQPYAFKEADRVATYLLAKN >gi|333032568|gb|GL891858.1| GENE 3 1578 - 2504 1186 308 aa, chain - ## HITS:1 COG:RSc0567 KEGG:ns NR:ns ## COG: RSc0567 COG0115 # Protein_GI_number: 17545286 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Ralstonia solanacearum # 2 305 3 307 309 441 67.0 1e-124 MNLADRDGFIWQDGQLIDWRDAKIHVLTHTLHYSMGVFEGVRAYETPKGTAIFRLQDHTK RLLNSAKIYQMKVPYDQAALEQAQIDVVRENKLASCYLRPLIWIGSEKLGIAATNNTIHA AVAAWAWGAYLGDEAMAKGIRVKTSSFTHHHPNVTMCKAKASGNYTLSILAHQEVAHSGY DEAMLMDPQGYVCQGSGENVFLIKDGVLHTPDIAGGALDGITRQTVMTIAKDLGYEVVER RITRDEFYIADEAFFTGTAAEVTPIREYDDRQIGAGCRGPITTEIQKTFFDAVQGKNPKY EHWLTYVK >gi|333032568|gb|GL891858.1| GENE 4 2529 - 5279 2877 916 aa, chain - ## HITS:1 COG:PA5014 KEGG:ns NR:ns ## COG: PA5014 COG1391 # Protein_GI_number: 15600207 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Pseudomonas aeruginosa # 4 904 48 979 982 679 43.0 0 MNAEQLQKTLRASQYAEQVLGLHQAVLEQDYQIDQFAAPLSTEQIYQLVDITLDGIGDEI TWMRALRILRSRLMFRWIWQDANQLTDVVTLTRELSDFADASICAAKAFARVALVAKHGE PLSYSGKVQDLIVVAMGKLGAQELNLSSDIDLIFAFDEQGETNGRKCIDVQQFCILWGQK LIYLLEHITADGFVFRVDMRLRPWGDGSALAISHAALEKYLSQHGREWERYAWIKARVVT GGKEGQDLLEMTRPFVFRRYVDYTAFAAMRDMKAMIEREVLRRHIEDDIKLGAGGIREIE FIVQVFQLIYGGSKRELQDRQCLVSLEHIGEAGLLEKQAVQELEDAYLFLRRVEHAIQAL NDQQTQLLPEEADLRQRIIDTLGFTSWNEFIDVLNEKRQKVKVQFKQLIEDTSSNAATEN FGQLEQQLDEVLDDNAKNLIHEFWHGHALKKLPSNAVQRLKTFWPHLIEAILQSEQPQTA LLRLMPLIESVMRRTVYLVMLIESKGALQRLVKMATVSPWICEELTQYPVLLDEFLSMDF ELPKRKDLEDSLRQQLLRIEIDQVEDQMRVLRLFKKSNVLTVAASDVLAESPLMKVSDAL TDIAEVSVNATLNLAYQTVAKRHGYPKDVEGKRCSLDYKAFAVIGYGKVGGIELGYGSDL DLVFIHYLDEQADTDGTKSITGFEFAMRVAQKFMSLITTQTLDGRVYEIDTRLRPSGEAG LLVTSLKAYEHYQLKSAWLWEHQALVRARSIAGDEALCQKFEIFRREILTQSRDEAYVRE EVLKMRQKMKDHLGSSSEQKKHGIFHLKQDAGGIVDIEFMAQYAVLAWSGTKPDLAHYSD NVRILEDAAKADCLSSEDATALIRAYLSERAESHRLALANQSMQVSAADWRSTRAVVCNL WQRLIDPTASVELDSE >gi|333032568|gb|GL891858.1| GENE 5 5348 - 6682 840 444 aa, chain - ## HITS:1 COG:CAC3391 KEGG:ns NR:ns ## COG: CAC3391 COG0642 # Protein_GI_number: 15896632 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 197 425 353 578 579 127 33.0 4e-29 MIISTFFKRAVPTNNDKICEAGMTQRLELHQVEQLTACKISLLLGLNAEQNYIEQFFRFS LRLLKCQKALLTFNQEPYFWHHCPDGMTAISFKPSRHLKQCFAKQQVIHHNHPSYQNLIN YLKELNIECGRALAVHLVQPDQTSMGFAVFFDDDETCFEDDQIQLLLDYCSSFMQQVELK FNYEELNELYEQQVALNSSKTKFFSIISHDLRAPFHGLLGFSEVLAKERETLDESSIQNI ADYLYDTSQSTYNLLESLLTWAMAEGGRFVYHPINFKLRQVSNIVCDVLHTLALKKNIEL VNAVSEDLKIYADINMMTSVIQNLVSNALKFTDVDGSGKVFIEAKQVGTNVEITVRDTGL GMTEQQMANLFHPRITASFKGTAGEKGAGLGLSLCKRFVEINQGKISVTSQKGVGTTFKV LLPSAQEVPEHHVEQQNTSEAKLV >gi|333032568|gb|GL891858.1| GENE 6 7868 - 8077 157 69 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03158 NR:ns ## KEGG: ACICU_03158 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 69 1 69 69 128 98.0 9e-29 MTPLLKAGNKPASPEDLLQTVNDSLSKLEHYLSALSRMHFDNDLTSDEFNAIMCGLRLQV HEICQQIKA >gi|333032568|gb|GL891858.1| GENE 7 8373 - 9785 1001 470 aa, chain + ## HITS:1 COG:STM2238 KEGG:ns NR:ns ## COG: STM2238 COG4928 # Protein_GI_number: 16765566 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase # Organism: Salmonella typhimurium LT2 # 27 283 9 250 443 116 32.0 1e-25 MNIAANSEDTSYKLIKDISDKIEIPFENDFWGREALASRLTDHVSRITVGATIAIDAEWG AGKSWFVKNWKAKLEQNDFKVIYLNAFNQDYIDDPFLTISMEIANCLENEETNIDTIKET IGKAYRAILPNLPMLLWYLTTSLVGMGALAKPVAETVEKLKTADDFGKEAAKLLNEKLQE HLSAQVENYDKEKQSLQYFKEALAKITSKLDKPLVFIVDELDRCKPEFAIRLIERIKHFF DIPKVVFILAINKTQLEESINNFYGFSNTANYLEKFIDFSIMLKSRDLDGNRYSEILKNY NQDFQLLLDHTEIHIYMNLCQIYSPNPRQLIRIINKFSLLKENLDNRKKLFLFLFLIYSE MRLIETYKEINFIEHFYELHLNFHQIRFRQYALNRSGERSEAAKLCDYLDYHVYSFNGNS SLFDLFFYYIEHIKSSRNDYKECKNAYYPTNKCSEDLIDEWHKYVHMIEG >gi|333032568|gb|GL891858.1| GENE 8 9976 - 10866 400 296 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03160 NR:ns ## KEGG: ACICU_03160 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 296 16 311 311 492 99.0 1e-138 VFVIFVYGLFRNFIEVSDKLDFTPLKYIVGFVLTLVILVSSISSYLDSNKSSSNLFYELM YGQRKRKIKQYTELFNKSIEEGYYPFSEKNNNINMEEVTNEIRNKIELASTESYFKEFKD KVRVEAIVDFFIQEAKGIETRVKGEINRLSKSAIINLSLGMMLSIGGILYLGNFVVNVQN FGSIEEMIINTFPKAIFVLLIEVFAYFFLKLYKQSLDDIKYYQNELTNIESKNLAVQIAK QSNNHKLITICIEKLLGTERNFILEKDQSTIEIEKERISSNNTNNTLQVLKDILKK Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:54:47 2011 Seq name: gi|333032567|gb|GL891859.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld89, whole genome shotgun sequence Length of sequence - 1875 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 49 - 621 241 ## COG1309 Transcriptional regulator - Prom 748 - 807 10.7 + Prom 858 - 917 4.0 2 2 Tu 1 . + CDS 945 - 1808 811 ## ACICU_02236 hypothetical protein Predicted protein(s) >gi|333032567|gb|GL891859.1| GENE 1 49 - 621 241 190 aa, chain - ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 171 9 181 193 90 30.0 1e-18 MSKRDTIIKTATALFNEKSYNSIGVDRIIAESNVAKMTFYKYFPSKEKLIESCLYKRNSD IQSAILERINTNDLPLVQLRSLFNWYIDWIYTEEFNGCLFKKATMEVVQLYPSVKNPINE YREWLYELVFSILIKIQVEDAAALTNLFLNILDGVINDGTIDKNLINAEKTWSYIKKIID LEKIEELVAI >gi|333032567|gb|GL891859.1| GENE 2 945 - 1808 811 287 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02236 NR:ns ## KEGG: ACICU_02236 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 287 1 287 287 560 100.0 1e-158 MSKKFEDFDNPRQKALLGMKNSIPTEQWEENLKFLKQLRARIAELPVCKHPAIEVLNNGL LDKFTLTRIHLEYRHAIVQIFTDALLMAQFQTKQLEPKLHSGAKMFPRVLLSLNVLDEFG FRPGTDLDNYYLGNPEYAHYPLYEDLLNDYGLSEKDRRGYQPSKIADQVRNFLESSYDSY IKVVALLAVAEEEVILFSPPLREATKAIGVDVEGGGYYHVHGVSTDETSEAADDDHEDDL WFALAQAITKEDYESLTTLCMDYCALWNEFWDAQIADIHYLEAKKLA Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:54:53 2011 Seq name: gi|333032566|gb|GL891860.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld91, whole genome shotgun sequence Length of sequence - 1445 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 4 - 276 224 ## ACICU_01015 hypothetical protein - Term 297 - 333 2.2 2 2 Op 1 . - CDS 338 - 658 208 ## ACICU_01014 hypothetical protein 3 2 Op 2 . - CDS 669 - 857 131 ## ABAYE2746 hypothetical protein - Prom 884 - 943 8.4 + Prom 883 - 942 5.2 4 3 Tu 1 . + CDS 962 - 1445 484 ## ACICU_01012 Cro/CI family transcriptional regulator Predicted protein(s) >gi|333032566|gb|GL891860.1| GENE 1 4 - 276 224 90 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01015 NR:ns ## KEGG: ACICU_01015 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 90 1 90 90 135 100.0 6e-31 MQNNLSNQTTERNQPEFLVGDVVVLTKECRTFKSNDLFEVKNKTLTRLWTIKSENHLILV SSKEIRTATVAELNAKRRLTSAEQALAEVS >gi|333032566|gb|GL891860.1| GENE 2 338 - 658 208 106 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01014 NR:ns ## KEGG: ACICU_01014 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 106 186 100.0 2e-46 MSKVLNELPASASNNESLILQALNASNQRQVAEMINVDASILSRMKTEKKSNGWTEIEFI SFLLTAIGLKVVQESDVYCSPEIAEATRVYLAHAFTSPEYMRILFK >gi|333032566|gb|GL891860.1| GENE 3 669 - 857 131 62 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2746 NR:ns ## KEGG: ABAYE2746 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 62 1 62 62 108 100.0 6e-23 MKISDLMTYHGCKNRKELSEKTGYSTVTLWKWENNGIPARTQAVLQVKTKGKLKADLQAL TA >gi|333032566|gb|GL891860.1| GENE 4 962 - 1445 484 161 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01012 NR:ns ## KEGG: ACICU_01012 # Name: not_defined # Def: Cro/CI family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 161 1 161 250 326 100.0 2e-88 MSLHTRIRQKLEEKKLRAADLARATKKSPVAAKKWLDGTSVPTAENLKVIAKFLGVSDDW LLYGGSDEQESSNNLAQLNVIDIEAFKQKYNIPDSEDAVKFVQAPAKPFPIQKRYVPVKA YSKMGMDGYFTDMGYDGNAGDGYVPTHTAGPRAYGIKGTGD Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:55:02 2011 Seq name: gi|333032565|gb|GL891861.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld92, whole genome shotgun sequence Length of sequence - 2741 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 2741 2082 ## ABAYE2698 bacteriophage protein Predicted protein(s) >gi|333032565|gb|GL891861.1| GENE 1 2 - 2741 2082 913 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2698 NR:ns ## KEGG: ABAYE2698 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 14 913 376 1275 1435 1442 96.0 0 AVTAATNAQTAAQIKLNTATSIAGRLAKGAFGLIGGWAGVATLGVMGLAAAYSYFNNKAE EAKQKLAEQAKVAEKADEELKKLTGNDKAKAVNDLTTAFNAQNKALEKSSRAVGSALIDI ENYARGNREVEKISQEARTGTISYTEAIERLNKIKLPTDLYENLKKQAAQYDDNASKASL SAEKLKLLRVEVKLGGNEAQNAAIQHQKQADALGNTATEAEKATKALQDYQAKQKDSVID SIYKSGWLDKGYTVAQANAILELQKAKGMSAILSKDEIDSALRNLKIIEEQQEREDKLTE AKRKQTQEIEKQAKLTKRLVGISGQSGIGTGPHLDVRYGGSLSGQKVSNEHLARLQAGGK PLTSYKISSNYGPRKAPTKGASSFHKGIDFSMPEGTPITTNVAVKDIKTWYDSKGGGYVS EVIFEDGVSLKLLHQSPKMQSKVKGGASKGSDKAAGDIQSQLERQQDLQRSLENEVASEV GRINNNRKARLEDVDKANFSPERTAEIKAEINRRADNDIAIAKQALRTKLEDYKEFQKTE EQLLEESFNRKKFNAAHDLELSKFEQKQAVELLEQQKQQELGLLKLAQEQRLFQARLSLL SETQAMQERYRLEREEILKNTKLSIEERQKLIALSKANQDKETRDKVNNAVQNWGGIQAD MNGTGEFFRQDQERFSRLNAANDLADSQFAATDLDEKNGLDVLNAHMEAGLIKQQDFENR KTAIIQAAQDQRNQIAAEYAQNAQDIEDKYHQDRLNAQIALGGQMMGSLTSMFGSMFGEQ SKAYKIMFAADKAYAIAAAGISIQQSIAKAASVGFPANIPLIASAIAQGASIIANIRAIK DQGFADGGYTGSGGKYQPAGIVHKGEVVWSQEDIKRWGGVGLVEKMRKSANPEAFLNNNA SADSVMRRAMMSS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:55:14 2011 Seq name: gi|333032564|gb|GL891862.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld94, whole genome shotgun sequence Length of sequence - 1868 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 22 - 81 5.2 1 1 Op 1 . + CDS 101 - 1000 622 ## COG5527 Protein involved in initiation of plasmid replication 2 1 Op 2 . + CDS 1073 - 1690 431 ## p3ABSDF0017 hypothetical protein Predicted protein(s) >gi|333032564|gb|GL891862.1| GENE 1 101 - 1000 622 299 aa, chain + ## HITS:1 COG:NMB0495 KEGG:ns NR:ns ## COG: NMB0495 COG5527 # Protein_GI_number: 15676404 # Func_class: L Replication, recombination and repair # Function: Protein involved in initiation of plasmid replication # Organism: Neisseria meningitidis MC58 # 63 242 20 207 327 102 30.0 8e-22 MMSTSKKELVVKSNQVIEASYQLSSTEQRIVLAAISKISRAEDITDDEIYRVTIDDLKKL GVHEKTAYRDLKDGVNRLYDRSINLTIDDESIKMRWIQSIRFLESKSVVGIRFSKEILPF ISNLSREFTKYSLSDIAGMSSAYAIRIYELLTQYRSIGKREISIEALRGMLELGKRYPLS ADLKRWVIDTAVDQINEHSPLNVSYEQIKTGRKVTHIHFTFKEKSKSIEHKSKQNNFYKL TDSQINMFGNQLSRLHEVSHLAQQGESYDDLAIKIKDMLRDPIQQKQLIPHLKNLGFKA >gi|333032564|gb|GL891862.1| GENE 2 1073 - 1690 431 205 aa, chain + ## HITS:1 COG:no KEGG:p3ABSDF0017 NR:ns ## KEGG: p3ABSDF0017 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 205 12 216 216 298 86.0 1e-79 MKSLSVIELSNLYGITRQAIYKQINKGNLSKNSDGKIDLAEAIRVFGEPSRNVNSSQTTE TRKLSEVHLLEQQVYMLQKQLEQAHEREQFQREELKAKNDQLHVKDEQIEAIQRLLEAPK AYITSSIDPKLDIATDTRSKSELNYDGLTTQPKEAPVEPKIQTQPKHDGLTTPELPENKR IPVPDHVEPEQPKRGFWSRFFRPYD Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:55:32 2011 Seq name: gi|333032563|gb|GL891863.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld95, whole genome shotgun sequence Length of sequence - 50250 bp Number of predicted genes - 51, with homology - 50 Number of transcription units - 30, operones - 14 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 57 - 112 6.1 1 1 Tu 1 . - CDS 134 - 421 487 ## ABBFA_002736 hypothetical protein - Prom 441 - 500 1.7 - Term 433 - 470 6.6 2 2 Op 1 . - CDS 505 - 777 396 ## ABBFA_002735 cell division topological specificity factor MinE 3 2 Op 2 22/0.000 - CDS 780 - 1592 1123 ## COG2894 Septum formation inhibitor-activating ATPase 4 2 Op 3 . - CDS 1663 - 2385 665 ## COG0850 Septum formation inhibitor - Prom 2442 - 2501 8.0 - Term 2437 - 2479 1.1 5 3 Op 1 . - CDS 2507 - 3553 958 ## ACICU_00833 hypothetical protein 6 3 Op 2 . - CDS 3570 - 4496 952 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 4629 - 4688 6.7 + Prom 4631 - 4690 8.8 7 4 Tu 1 . + CDS 4741 - 5394 216 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 + Term 5418 - 5444 -1.0 + Prom 5505 - 5564 4.9 8 5 Op 1 . + CDS 5588 - 7627 2338 ## COG0210 Superfamily I DNA and RNA helicases 9 5 Op 2 1/0.400 + CDS 7652 - 8104 624 ## COG0756 dUTPase + Term 8129 - 8166 6.1 + Prom 8125 - 8184 7.5 10 6 Op 1 1/0.400 + CDS 8304 - 9722 1280 ## COG1109 Phosphomannomutase 11 6 Op 2 . + CDS 9737 - 10645 1122 ## COG0548 Acetylglutamate kinase + Prom 10653 - 10712 8.7 12 7 Op 1 . + CDS 10766 - 11548 676 ## COG3176 Putative hemolysin + Prom 11555 - 11614 2.4 13 7 Op 2 . + CDS 11657 - 12505 892 ## COG0121 Predicted glutamine amidotransferase + Term 12514 - 12567 8.1 + Prom 12641 - 12700 8.2 14 8 Tu 1 . + CDS 12764 - 13213 519 ## COG2703 Hemerythrin + Term 13249 - 13287 6.1 + Prom 13270 - 13329 7.7 15 9 Op 1 . + CDS 13366 - 14433 1012 ## ABAYE2923 hypothetical protein 16 9 Op 2 . + CDS 14433 - 14756 344 ## COG2914 Uncharacterized protein conserved in bacteria + Term 14763 - 14801 2.2 - Term 14749 - 14787 3.0 17 10 Tu 1 . - CDS 14811 - 15209 407 ## COG2913 Small protein A (tmRNA-binding) - Prom 15377 - 15436 2.8 + Prom 15186 - 15245 4.7 18 11 Tu 1 . + CDS 15321 - 15758 417 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 15790 - 15823 4.0 - Term 15771 - 15819 10.3 19 12 Op 1 6/0.100 - CDS 15828 - 16946 1267 ## COG5008 Tfp pilus assembly protein, ATPase PilU 20 12 Op 2 . - CDS 16974 - 18041 1322 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT - Prom 18116 - 18175 4.6 + Prom 18002 - 18061 4.6 21 13 Tu 1 . + CDS 18138 - 18830 719 ## COG0325 Predicted enzyme with a TIM-barrel fold + Term 18836 - 18870 3.0 - Term 18981 - 19028 11.7 22 14 Op 1 28/0.000 - CDS 19032 - 22628 3716 ## COG0419 ATPase involved in DNA repair 23 14 Op 2 . - CDS 22638 - 23894 1184 ## COG0420 DNA repair exonuclease - Prom 23957 - 24016 6.3 + Prom 23921 - 23980 2.9 24 15 Tu 1 . + CDS 24052 - 24543 487 ## COG1764 Predicted redox protein, regulator of disulfide bond formation - Term 24543 - 24579 4.8 25 16 Tu 1 . - CDS 24611 - 24988 464 ## COG3324 Predicted enzyme related to lactoylglutathione lyase - Prom 25013 - 25072 5.7 + Prom 25284 - 25343 7.8 26 17 Tu 1 . + CDS 25368 - 25475 85 ## + Term 25545 - 25611 30.0 + Prom 25477 - 25536 80.3 27 18 Op 1 . + CDS 25632 - 25949 308 ## ABBFA_002711 hypothetical protein + Term 25964 - 25997 -0.5 + Prom 25959 - 26018 4.4 28 18 Op 2 . + CDS 26039 - 26944 868 ## COG1090 Predicted nucleoside-diphosphate sugar epimerase - Term 26834 - 26895 0.9 29 19 Op 1 . - CDS 26936 - 28051 1113 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 30 19 Op 2 . - CDS 28077 - 29141 1123 ## COG0113 Delta-aminolevulinic acid dehydratase - Prom 29352 - 29411 3.3 + Prom 29065 - 29124 4.4 31 20 Tu 1 . + CDS 29197 - 29730 568 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Prom 29802 - 29861 15.4 32 21 Op 1 19/0.000 + CDS 30000 - 31151 1528 ## COG1566 Multidrug resistance efflux pump 33 21 Op 2 1/0.400 + CDS 31158 - 32681 1464 ## COG0477 Permeases of the major facilitator superfamily + Term 32692 - 32721 0.5 + Prom 32758 - 32817 4.1 34 22 Tu 1 . + CDS 32984 - 34969 2189 ## COG0405 Gamma-glutamyltransferase + Term 34987 - 35016 0.5 + Prom 35464 - 35523 2.3 35 23 Tu 1 . + CDS 35617 - 36900 357 ## PROTEIN SUPPORTED gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 + Prom 36908 - 36967 3.3 36 24 Tu 1 . + CDS 37024 - 37815 279 ## ABAYE2903 hypothetical protein + Term 37924 - 37969 5.3 + Prom 37913 - 37972 9.9 37 25 Op 1 . + CDS 38025 - 38240 144 ## ABAYE2902 hypothetical protein 38 25 Op 2 . + CDS 38243 - 38452 188 ## ABAYE2901 hypothetical protein 39 25 Op 3 . + CDS 38449 - 39003 267 ## COG3617 Prophage antirepressor 40 25 Op 4 . + CDS 38984 - 39364 242 ## ABAYE2899 hypothetical protein 41 25 Op 5 . + CDS 39374 - 39679 64 ## gi|301513007|ref|ZP_07238244.1| hypothetical protein AbauAB05_15529 42 25 Op 6 . + CDS 39682 - 39798 124 ## ABAYE2897 hypothetical protein 43 25 Op 7 . + CDS 39804 - 40082 394 ## ABAYE2896 hypothetical protein 44 25 Op 8 . + CDS 40095 - 42560 1505 ## COG5519 Superfamily II helicase and inactivated derivatives + Prom 42751 - 42810 9.1 45 26 Op 1 . + CDS 42893 - 43096 175 ## AB57_0968 single-strand binding protein + Prom 43119 - 43178 4.6 46 26 Op 2 . + CDS 43296 - 44675 809 ## ABAYE2894 hypothetical protein + Term 44750 - 44790 -0.5 + Prom 44813 - 44872 5.5 47 27 Op 1 . + CDS 45018 - 45692 232 ## AB57_2685 hypothetical protein 48 27 Op 2 . + CDS 45692 - 45880 158 ## gi|260555814|ref|ZP_05828034.1| predicted protein + Prom 45993 - 46052 8.4 49 28 Tu 1 . + CDS 46083 - 46601 194 ## RPSI07_1631 hypothetical protein 50 29 Tu 1 . - CDS 47723 - 47902 122 ## gi|332874199|ref|ZP_08442122.1| hypothetical protein HMPREF0022_01735 - Prom 48147 - 48206 7.1 + Prom 49022 - 49081 14.4 51 30 Tu 1 . + CDS 49203 - 50250 492 ## ACICU_00862 putative ABC oligo/dipeptide transport, ATP-binding protein Predicted protein(s) >gi|333032563|gb|GL891863.1| GENE 1 134 - 421 487 95 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002736 NR:ns ## KEGG: ABBFA_002736 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 95 1 95 95 185 100.0 4e-46 MALSQPATFNEEWSDERVFAYLNQLPPNGVNADFHVLYHAFKHMRPNDYERLLTKFVADG RDINATNPEGERIHDVIAKFPRQSAPFLEVLAKFA >gi|333032563|gb|GL891863.1| GENE 2 505 - 777 396 90 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002735 NR:ns ## KEGG: ABBFA_002735 # Name: minE # Def: cell division topological specificity factor MinE # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 90 1 90 90 142 100.0 5e-33 MAGFWSKLFSSEEKPSSAQTAKDRLKVIVASEQGLGRRLSQDKIDQMKKEIMQVVSRYVS GVGEQHIQMQVRSEANIEMLEMNINLPEER >gi|333032563|gb|GL891863.1| GENE 3 780 - 1592 1123 270 aa, chain - ## HITS:1 COG:PA3244 KEGG:ns NR:ns ## COG: PA3244 COG2894 # Protein_GI_number: 15598440 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor-activating ATPase # Organism: Pseudomonas aeruginosa # 1 270 1 269 271 358 66.0 5e-99 MAKIVVVTSGKGGVGKTTTSASFATGLALRGHKTVVIDFDVGLRNLDLIMGCERRVVYDF VNVINNEARLQQALIRDKDIENLYILPASQTRDKDALSDEGVARVIDELSQEFDYIICDS PAGIERGAILAMYHADEAIIVTNPEISSVRDSDRIIGMLDSKTKKVEHNEGRIRKHLCIT RFNPERADRQEMLTIDDISKDILRVPTLGVIPECPSVLQASNEGKPVILYSETKAGQAYD DLVARFLGEDRPYRHITAQPKGWLARLFGA >gi|333032563|gb|GL891863.1| GENE 4 1663 - 2385 665 240 aa, chain - ## HITS:1 COG:XF1322 KEGG:ns NR:ns ## COG: XF1322 COG0850 # Protein_GI_number: 15837923 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Septum formation inhibitor # Organism: Xylella fastidiosa 9a5c # 108 239 114 238 238 102 40.0 7e-22 MADIRITGRMVNFSRITFDTNDHDVIRQQLSNILNEGSYQGTVVIIDSTVEQELIALIQL LVSMGLQPMAVIDGILGDEARAIQFPVLPADQPLQRIKPTAEQVAIVEKPSSAQASVETK KPLNNNAVAHITSYHDEILRTGQSLVQDQGDIILKAGMNSGSEVIASGNIHIYGTVRGRV IAGAGGHAAARIFCQSLEAELVSIAGTYCVADDIPKHVVKKPVHIYLNEKQELEFEALEL >gi|333032563|gb|GL891863.1| GENE 5 2507 - 3553 958 348 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00833 NR:ns ## KEGG: ACICU_00833 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 348 1 348 348 661 100.0 0 MQNSSGKQTKYHRVDSSSLSFKLFLVYDIFMVFIIIFNLFCLAANFFLMSSIGAWFFEHI HLPQVLSFYRTHLHPWVITSEAWFIGFLIIELLVRWGIAIVYKHHKRWFFFPFIHWYEIL AIIPQLRFLRLFRAGIIAYRLHELGYPVIPESWRKTGLFYYRVVMEELSDRVVITVIDGI RYELETSSSHKQIIHDLVNHHREQFTVTLTALLQESLATALKEQKPAITRAVGQIVDQAI QDTPELTQLLRLIPLVGGRIEQQIQSIGQRLGENISAGLIEPLIEGSAAHPNSTYQLISQ KISHINIDNHELEQLVESVVFETLEAVRKQVKVKQWQQTLAEYDRIKE >gi|333032563|gb|GL891863.1| GENE 6 3570 - 4496 952 308 aa, chain - ## HITS:1 COG:PA0834 KEGG:ns NR:ns ## COG: PA0834 COG0204 # Protein_GI_number: 15596031 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Pseudomonas aeruginosa # 9 303 3 298 304 224 39.0 1e-58 MSTAPNKQSALKKITRGLTVGTVITGSTFFHGPPVLALGLTKLFKKSSKIDETNIQITNS WLGVNNWLIDHVLPNLKWDISIDEDLDLNMQGRYLMTCNHQSWVDTTVNQYFGLTRMPLT RFFTKWELIFIPFVGQAFKILGFPMMKRHTKEQIAKNPELKDRDMMEARKACEQLLSQPF TLLNYLEGTRFTQEKHDKQKSPYKHLLKPKAGGLALALNILGDKIDALVDMTIVYPDGVP GYGDFWLGDVSKIAVNLRKIEIPDWVLGGNYEDDPVYRERFQQWVHELWTEKDQLIEKMK AQYATTNL >gi|333032563|gb|GL891863.1| GENE 7 4741 - 5394 216 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 68 211 205 344 347 87 33 1e-16 MRALVISTVVGAAVVLSGCQTTGNNLGGVEYDKAALGTLIGAAAGYGISKSNANSSRQNN RAAAIGAVLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNI KPNFYATLDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGKGVPS SRIDAQGYGSSNPIADNSTASGREQNRRVEISIYAKQ >gi|333032563|gb|GL891863.1| GENE 8 5588 - 7627 2338 679 aa, chain + ## HITS:1 COG:PA5296 KEGG:ns NR:ns ## COG: PA5296 COG0210 # Protein_GI_number: 15600489 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Pseudomonas aeruginosa # 5 679 2 669 669 679 53.0 0 MSSASQLNNKQEEAMKYTQGPLLVLAGAGSGKTSVITRKIAYLVQHCRIPAHRITAMTFT NKAAREMKERVTKLLSREEAKGLSVSTFHTFGLNLLRLELKNLPLKANFSILDADDCKRI LMDLMHRDNLSGAESKELIAKAMKKISDWKNDLILPEQAHSTCETPEDVQFAHLYQLYER NLRAYNAVDFDDLIVMPTRLLQENAEVRDKWQNRVRYLLVDEYQDTNTAQYILVKLLVGV MGQFTAVGDDDQSIYAWRGAKPENMALLKQDFPNLHIIKLEQNSRSTSRILKAANCVIQN NPHIFDKKLWSDKGHGEVIRIITCRNDDDEAERVVKDLLTHKLMNGKNWKDYAVLYRGNF QARVLETQLRQMQIPYKLSGGTSFFARAEIKDVMSYLRLIINPEDDSAFLRIINTPKRAI GPVTLEKLGLFAQENNLSLLGASSDQRLSMVLPKKAETQLHEFADFISTFTRELLEDDEP VPKVRQMMNEAGYIDYIREQSATPAQEKSKLDNIENLFSSIQNLINRAEDVDEKNIESVI RKLVLLDMLEQQQEEEDTDKVNLLTLHAAKGLEFPYVYIMGLEEELLPHKNSIAAETIEE ERRLMYVGITRARQGLTLTLAEQRKNGGQMKQMTPSRFLDELPQDELEWLGRKKKIAANV DPKEQAQQYLANLKALLKR >gi|333032563|gb|GL891863.1| GENE 9 7652 - 8104 624 150 aa, chain + ## HITS:1 COG:ECs4515 KEGG:ns NR:ns ## COG: ECs4515 COG0756 # Protein_GI_number: 15833769 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Escherichia coli O157:H7 # 2 150 3 151 151 231 71.0 5e-61 MKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDV NFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVL VPVVQAEFEQVEEFEETLRGAGGFGHTGKQ >gi|333032563|gb|GL891863.1| GENE 10 8304 - 9722 1280 472 aa, chain + ## HITS:1 COG:PA5322 KEGG:ns NR:ns ## COG: PA5322 COG1109 # Protein_GI_number: 15600515 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Pseudomonas aeruginosa # 6 459 8 453 463 267 32.0 4e-71 MNVRHSFPKNIFRAYDIRGKLSYLTTDVVRSIAYGLAQQYKQAEQTQLIIGYDARLTSPA YAHLIEEILVEQGLNVTNIGCCSTPMMYYIAREFGGNGIMVTASHNPKSDNGIKWILRGE PPSPEMIQQVGEFAQTYVPTHTISLLELSTPQFNSEFCKKYQQAIFNDIQLKRPLKVVLD GLHGSAGHCSKLVLEKMGCEVIALRTTPNGEFPDHAPDPSHAAHLKELRKTIIEQGADIG IALDGDGDRVVLLDEKANILTADRLLSLFAQMCLEQQPDKEIVFDVKCSLMVQRTVERLG GKPKMIRTGSSFLRAYLSQSNGNAIFGGEYAGHYVFNDGRGFGYDDGLYAALRVMEYFTE SSAATISDLFSNYPERCCTEDTYIGTHQSDPKHVLQDIEILSHRLGARISKIDGVRLDFD DGFGIIRASNTGEYFTVRFDADNPLRLKEIQQKFIDMLQERYPQIAQELSEA >gi|333032563|gb|GL891863.1| GENE 11 9737 - 10645 1122 302 aa, chain + ## HITS:1 COG:PA5323 KEGG:ns NR:ns ## COG: PA5323 COG0548 # Protein_GI_number: 15600516 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Pseudomonas aeruginosa # 12 299 12 300 301 360 66.0 2e-99 MPQDQHLGVDKAKILIEALPYIQRFSGKTLVVKYGGNAMTDPELESSFARDIVLLKTVGL NPIVVHGGGPQVDSFLKQLGRESDRIDGMRVTDEATMEVVEMVLGGSVNKSIVNLINKHG GRAIGLTGQDGNLLRARKLLMEKQEEDGSIKHIDLGMVGEVTGVKTDVLEMFTQSDFIPV IAPLGVDEKGNTYNINADLVAGKVAEALGAEKLILLTNISGVLDENKNLLTGLTTQEVDR LIETGVIYGGMIPKVGCALDAVKGGVVSAHIVDGRVPHATLLEIFTDHGVGTLISNRTQT TH >gi|333032563|gb|GL891863.1| GENE 12 10766 - 11548 676 260 aa, chain + ## HITS:1 COG:PA4350 KEGG:ns NR:ns ## COG: PA4350 COG3176 # Protein_GI_number: 15599546 # Func_class: R General function prediction only # Function: Putative hemolysin # Organism: Pseudomonas aeruginosa # 26 252 15 243 251 108 31.0 1e-23 MLEKFNQYRQTWTLPLNRHKANNQTQFRFEWVDNLKELQDVQRFRAQQFSKQFGIQFEDN LDQDIYDFGCEHAVLREKWTGEIVAYTRLKLFQGHEIGQSYSANEFDIVPHLSHLPNVLE IGRTCVHPRFRNGKALSTLWLNLAPKVLWSMRAKYLMGCVSIHLQDNLARAYYTHRQIQQ LPDTKTIDIRSKKIYEPEYPEFSFPQDERMPKLFQMYLSMQSKLSKDAFFDAEFNCLDYF VFLEVNKIATSFVMNKMAQR >gi|333032563|gb|GL891863.1| GENE 13 11657 - 12505 892 282 aa, chain + ## HITS:1 COG:RSc0485 KEGG:ns NR:ns ## COG: RSc0485 COG0121 # Protein_GI_number: 17545204 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Ralstonia solanacearum # 1 252 1 252 276 355 60.0 7e-98 MCQLLGMNCATPTDITFSFRGFSQRAGITSDHSDGFGIAFFEDKACRLFVDNQSAVESPI ADLIRNYPIKSRNVIAHIRKATQGKITLENSHPFIRELWGRHWIFAHNGDLHDFNPPLSG RFTPVGNTDSERAFCYLLDQLVEVFGYEEPTLEQIFEVLEKISPKIAEYGTFNFCLSNGQ ALFSYAITKLHWLVREYPFNNAHLIDLDVEVDFSQVTTPEDRVAVITTEPLTHNETWIAY QPGEMILFQHGKPIKKAITQVERLIREEKNPELKRITRADQY >gi|333032563|gb|GL891863.1| GENE 14 12764 - 13213 519 149 aa, chain + ## HITS:1 COG:PA1673 KEGG:ns NR:ns ## COG: PA1673 COG2703 # Protein_GI_number: 15596870 # Func_class: P Inorganic ion transport and metabolism # Function: Hemerythrin # Organism: Pseudomonas aeruginosa # 3 146 6 146 153 124 42.0 6e-29 MKWASEYNTGIDVIDEQHKRILDYINEIDDVKDDEDRRRIKDVLDNIIDYTQSHFTFEES LQEEADYKYRVPHKRVHDLFIKKIELYRERFEMGHTIEAELQEILAKWLINHIQHDDADY VGAVKENMMGIIREKEKKKGKNWFARFFS >gi|333032563|gb|GL891863.1| GENE 15 13366 - 14433 1012 355 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2923 NR:ns ## KEGG: ABAYE2923 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 355 28 382 382 564 99.0 1e-159 MSRWLSPLMAFCLSFVIMATLAPTMGIQIDRQIDFWLLWFGTMLLLALPVCYLEIALAKR SKTTALNALSSLTREADSSPKWRVVGWLAVVFIPFLAGNVLSTASNILVAQFAPSISGQI IFAGLAVAALVLSFIPRQILILLMTLGVIASIVLANMMGSTLQPWHWTSVEFKEWGNATV LALVASGLGLGLYWQNSVGAVQAQEGATKTVLPIWLAQLIAVVAFGFFSLQAQLPVLTWI FTGVMTSALFVQLAREQLAQRQLMPVLQWVIIVVAIVVWAVPEVHNLFTLILMLWGLLIC LIYAIFAGWIMKISHLRKSMNFSNELFYNLWRIAVRIVLPLSIIVAMIAVIGQSI >gi|333032563|gb|GL891863.1| GENE 16 14433 - 14756 344 107 aa, chain + ## HITS:1 COG:ECs3480 KEGG:ns NR:ns ## COG: ECs3480 COG2914 # Protein_GI_number: 15832734 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 7 91 13 99 102 70 44.0 9e-13 MERTQQVWVAFAVPEQQFLISVPFEEGMTAAQAVQASGLSNQVDLPEPLQLGIFGVKVET DAVVHAGDRVEVYRPLMINPKDIRRKRAAKNPVGRYIKGNRFKQSAQ >gi|333032563|gb|GL891863.1| GENE 17 14811 - 15209 407 132 aa, chain - ## HITS:1 COG:PM1886 KEGG:ns NR:ns ## COG: PM1886 COG2913 # Protein_GI_number: 15603751 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Pasteurella multocida # 1 119 7 117 137 65 35.0 2e-11 MQKLVLTLFVTSLLAGCSIFGVYKVDIPQGTPLTKAQASQVQVGMNFQQVRFLLGSPTVT DPLNPQRWDYIYNYIPGTYAKKAKIPAAHGQHLKIYFDGTGTVTKIEGLETIPESQPGLP ASKEAILTAPPL >gi|333032563|gb|GL891863.1| GENE 18 15321 - 15758 417 145 aa, chain + ## HITS:1 COG:STM0693 KEGG:ns NR:ns ## COG: STM0693 COG0735 # Protein_GI_number: 16764063 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Salmonella typhimurium LT2 # 1 140 1 140 150 166 59.0 1e-41 MPISNQDLRKAGLKVTLPRIKILELLENSKQHHLSAEDIYKTLLEQGEDVGLATVYRVLT QFEAAGIIQRHHFENNHSVFEIMQEDHHDHLVCQNCNKVIEFTNDVIEKEQHSVAEQHGF TLTGHSLNLYGYCNEPECQEALRKK >gi|333032563|gb|GL891863.1| GENE 19 15828 - 16946 1267 372 aa, chain - ## HITS:1 COG:PA0396 KEGG:ns NR:ns ## COG: PA0396 COG5008 # Protein_GI_number: 15595593 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilU # Organism: Pseudomonas aeruginosa # 1 370 1 370 382 515 67.0 1e-146 MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQR REFAETRECNFAIMNREKTARFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLS MTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIEDPIEFIHEHAGCIITQREVG IDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEI HEIKDLMKRSRELGMQTFDQALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQL SDGKQHLTFDRQ >gi|333032563|gb|GL891863.1| GENE 20 16974 - 18041 1322 355 aa, chain - ## HITS:1 COG:PA0395 KEGG:ns NR:ns ## COG: PA0395 COG2805 # Protein_GI_number: 15595592 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Pseudomonas aeruginosa # 11 354 1 344 344 580 84.0 1e-165 MTYFDLLGEIMDITELLAFSVKNGASDLHLSAGMPPMIRVDGEVRRINLPALEHKDVHRL VYDIMNDKQRRDYEEKLETDFSFEVPNVARFRVNAFNQNRGAGAVFRTIPSKVLTMEDLG LGQIFKDICDYPRGIVLVTGPTGSGKSTTLAAMLDYINENRYDHILTVEDPIEFVHQSKK CLINQREVHRDTHGFNEALRSALREDPDIILVGEMRDLETIRLALTAAETGHLVFGTLHT TSAAKTIDRVIDVFPAEEKDMVRAMLSESLQAVISQTLLKKNGGGRVAAHEIMIGIPAIR NLIRENKVAQMYSAIQTGANHGMTTLDQSLKGLVARGVISPQTARTAAKQPESFL >gi|333032563|gb|GL891863.1| GENE 21 18138 - 18830 719 230 aa, chain + ## HITS:1 COG:STM3100 KEGG:ns NR:ns ## COG: STM3100 COG0325 # Protein_GI_number: 16766401 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Salmonella typhimurium LT2 # 1 228 1 233 234 211 49.0 8e-55 MNYLQDARQHVLQQIRTACELAQRAPETVQLLAVSKTHPSERLREMYAAGQRAFGENYLQ EALDKIDALQDLDIEWHFIGHVQRNKTKHLAEKFDWVHGVDRLIIAERLSNQRGDDQAAL NICLQVNIDGQESKDGCAPEDVAELVAQMSQLPKIKLRGLMVIPAPDNTGAFADAKKLFD AVKVQHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQKG >gi|333032563|gb|GL891863.1| GENE 22 19032 - 22628 3716 1198 aa, chain - ## HITS:1 COG:PA4282 KEGG:ns NR:ns ## COG: PA4282 COG0419 # Protein_GI_number: 15599478 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Pseudomonas aeruginosa # 1 1198 1 1211 1211 370 31.0 1e-102 MKILSIRIKNLASLADEHFIDFESAPLAHAGLIAIVGKTGAGKSTILDAMCLALFNRVPR LKDSDGKLKDVDGSELLTNSPLTVLRRGTGHGFAELCFIAQDQKRYLARWEIKRARENPN GKLQSVQRHLKCLTAGVVLADKAKAVDEKVKQITQLSFEQFTRAVLLAQSEVTAFLKARD SERGELLEYLTNSSIFAKIGELAFRKTADIAKQRKQLEEFLGHIEILSDEEIAAFTEQYQ QAEQNYQQLEQQKHVLDKQQQWFERKAKLEQEVQAKQQQFQTQQNHHQQLASEREQLKRL EIFSEIRPQVFQQAQNLQTLQQLEPQIQQAQTKFNELVQIFETGQKQYQLAEQQLKQTLD FEQQHQHALNQVRQSIQERAFIADEYKKCKEKRQVLEQNLSPLQQQRNAVQQHIAQLEQN KIHLQQQLIQTQQYAALDKGLSAHLHQLGQFIQNYEAIEQQIGNPTLARQKLSEAKSELE QLTVSLGTVEQIELKLEQQRKDKDQKLAQVTQLDLIQQKIKIYHELYAELQQFTEKHTQA SAQEEQLKTVCQLAEQDYQTAKTEREKLQHILQQQRLLHTENIEQLRANLKEGEACLVCG STHHPYRIDDSAISKALFDLQQQQEQQAIALEQTKFNAWQTQQHALTQCRAELEQVQKYL AQLQVKQTHLQQELEQTFNLNQLHIELNQAPEQILQTLNELRQATQTAISLFDSENVRLT QAIKQHNQLIQTIQRNESLLNTAQQWQQQVQHIVECLSETEQHAWQQASSQTAKQTWAIL DARAKQLEQQEQLSQRFEQQQQELKMLSASLEQMTKQIDEIDQNLQEITLKGQQNNEKAV SLIQQMTGRSDIKPHEWLIEHDAKRQHQQTAYHEAKQRFEQTRQNFEQQKQALDQLKHQY QHTEQHQQQLDGQIQNWLKAHTDFQASDLTALIQINSVQEQDIRNRLNHAERLLSEASSA LKTMQEQLSEHLQTQPNIEYEKLVTLIQDNIAKLKAQLEVRDGLKLKLELHQQNLAKQQK YAEQIQNIQQEEHRWSKISGLIGDAKGKEFRDYAQQYHLDILVEHANQQLAMLSQRYTLK RLDQSLSLAIIDHDMDGETRSVASLSGGESFLTALALSLAIANMASGSMKIESLFIDEGF GTLDASSLHMVMNALDQLQNQGRQVILISHIQEMHERIPVQIQVKPLGAGASTIEIVG >gi|333032563|gb|GL891863.1| GENE 23 22638 - 23894 1184 418 aa, chain - ## HITS:1 COG:PA4281 KEGG:ns NR:ns ## COG: PA4281 COG0420 # Protein_GI_number: 15599477 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Pseudomonas aeruginosa # 3 409 1 400 409 340 46.0 3e-93 MSVHFLHTSDWHLGQFFYNHSRHYEHQQFLSWLLTQIQEKQPHALLIAGDIFDVINPGSQ AQKQLYQFLADAHRIAPHMQTLMIAGNHDSGYRIEQVEPLLEKYNAKTVGVVRWNEDKTL DLDRLLLPIYNQNQDIVAWCLALPFLRSAEITGFNEHTTNSKNAIAYLHQQLIAEAKRRK TPDQALILMSHAHMQGGETSDSERPIIIGNEEALSTTLFEDAVDYVALGHLHKPQKVGQP HIRYSGSPIPLSFSEINYKHQVVEVKIDPSQDTDSRLQFEAVEIPRCIQLHRIRGELNEV LQQLKALPHGVIENIDHREYVDIEYYSLTPPQPNLRQQFEAALPPDRYRLVRISRQYVNK DTTNSNTTQHIALEPPTPEKLFQNIWEKQGYSADDAVLKDFLSLVQEAQKHLENDASH >gi|333032563|gb|GL891863.1| GENE 24 24052 - 24543 487 163 aa, chain + ## HITS:1 COG:AGc1844 KEGG:ns NR:ns ## COG: AGc1844 COG1764 # Protein_GI_number: 15888346 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 158 26 172 176 163 51.0 1e-40 MNFENKMAIHKYEVKIQWEGNTGTGTSSYRSYKRDFSIQHPQKTTIQGSSDPTYLGDVTR WNPEDLLVASASACHKLWYLHLCAVNHIHVVSYIDHALGFMEDTDPVKRGHFTQIILRPE VVLEKGADQELAAKLHEEAHHECMIANSVNFPITCEASFSFAE >gi|333032563|gb|GL891863.1| GENE 25 24611 - 24988 464 125 aa, chain - ## HITS:1 COG:MA4669 KEGG:ns NR:ns ## COG: MA4669 COG3324 # Protein_GI_number: 20090693 # Func_class: R General function prediction only # Function: Predicted enzyme related to lactoylglutathione lyase # Organism: Methanosarcina acetivorans str.C2A # 1 124 1 128 129 82 33.0 2e-16 MNNIAYFEIQSSNPARDAQFYQAVFGWQFKLDESLPIEYYRIETPSIMGGLLKRPAQTPP MEYGTNAFTCSVQVENFDEVAAKILAQGGIVAMDKFAIPGRAWHGYFVDLDHNVFGIFQV DENAT >gi|333032563|gb|GL891863.1| GENE 26 25368 - 25475 85 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKLRSYFLWFFALCIVLTLIVGVIAALLPASVGG >gi|333032563|gb|GL891863.1| GENE 27 25632 - 25949 308 105 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002711 NR:ns ## KEGG: ABBFA_002711 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 105 46 150 150 175 100.0 6e-43 MIFVLFRFLKKERRAPTVPEKKKFTLGFTLIFWGYNLCGVLFGLFLFSRKDPEILQNFML YLKQPQFLSIMVIMLLMLAIPLYLITYWFYGKQAQRMANKMFNVS >gi|333032563|gb|GL891863.1| GENE 28 26039 - 26944 868 301 aa, chain + ## HITS:1 COG:yfcH KEGG:ns NR:ns ## COG: yfcH COG1090 # Protein_GI_number: 16130239 # Func_class: R General function prediction only # Function: Predicted nucleoside-diphosphate sugar epimerase # Organism: Escherichia coli K12 # 4 298 2 296 297 193 39.0 3e-49 MNKNVLITGASGFIGTHLIRFLLQKNYNVIAVTRQAGKKSDHPALQWVQKFEDISIRQID YVVNLAGANIGEKRWTESRKKQLIKSRVNTTRKLYVWLKQSQIFPEVIVSGSAIGYYGID AQEKWAEVCTEQSSPQPIFMSQLCQEWELAALADPQQNTKIIRLGVVFGQGGGILPKMLL PIRLNLVGQIGHGRQPVVWVHIEDVLNAIEFIFQHPQSAQIHNVVAPENVTQKVFVEQAA KVLNKKPMLSAPSTVFRCLLGEQSQLILNGQYVKPAALQAEGFEFAYPQLKMALENILAS G >gi|333032563|gb|GL891863.1| GENE 29 26936 - 28051 1113 371 aa, chain - ## HITS:1 COG:PA4548 KEGG:ns NR:ns ## COG: PA4548 COG0665 # Protein_GI_number: 15599744 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 13 362 15 360 364 281 40.0 1e-75 MHIAIIGAGISGLMSALELVEQGCTISIFDQQQAGQAASWAGGGILSPMYPWRYVHAVNQ LAQFGKASYQAWNQKLYPVTGIDFEIHDTGMLIFDEEDFDVGLSYAEQHQEPMQRCEYLQ RDALEQVNPHISEQFQEAIYFPELSNIRNPRVLQSLISYLKQHPNVEFFENTPVKKLIQQ GDAIQALQTEDGRKHTADHFVITSGAWSHYWNSQLQLDIPVEPVQGQMLLFKTPAHWLPT MCMNRVMYLIPRMDGHIVCGSSMAHRGFDTSTDETTQHNILEACLEMVPELADFPIVHRW AGLRPSSPNGVPYIGKMPEMDNLWANFGHFRNGLCMGAGSAQLLRQLMLGQPALVDAKAY SPERLQNKILA >gi|333032563|gb|GL891863.1| GENE 30 28077 - 29141 1123 354 aa, chain - ## HITS:1 COG:VC0105 KEGG:ns NR:ns ## COG: VC0105 COG0113 # Protein_GI_number: 15640137 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Vibrio cholerae # 27 352 9 335 347 435 65.0 1e-122 MEYPPTYPSVIPNIEIVMTYTFNRPAFPATRMRRIRKNDQLRAMVSETQLTTNHLIYPVF VLPGQNQTQDIPSMPNIQRLSADLLLKKAERLLELGVSKLALFPVTPQEDKSLTAEAAWR EDGLVQTTCRLLKKELPEMVLITDGALDPYTTHGQDGIIDETGYVLNDETVECLIKQALS HAEAGAEVIAPSDMMDGRIGAIRQALEANGHIYTNIMAYSAKYASSFYGPFRDAVGSASN LKGGNKYNYQMDFANRAEALHEIALDIQEGADMVIVKPGMPYLDVVREVKDTFGIPTFIY QVSGEYAMLAGAIQNGWLSDSVILESLMCCRRAGADGIWTYFAETAAEKLKEMN >gi|333032563|gb|GL891863.1| GENE 31 29197 - 29730 568 177 aa, chain + ## HITS:1 COG:YPO3835 KEGG:ns NR:ns ## COG: YPO3835 COG2050 # Protein_GI_number: 16123970 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Yersinia pestis # 47 175 24 153 156 87 35.0 1e-17 MGVYHAFKFRQRMSDEKKNWTGNIQLGAKTDLNVVLNQLCKAFNSCPFFKHSGMIMRVVD GHIEGYVEMQPDLIGNLAFQVLHGGVAATLLDSIGGIVAMEHLYRRSTPETLPETIKQVT RLATVDMRVDYLAPGRGKYFIARAEVLRLGRKGCTMRMTMVNDEDKAIAAGIASYAY >gi|333032563|gb|GL891863.1| GENE 32 30000 - 31151 1528 383 aa, chain + ## HITS:1 COG:VC1410 KEGG:ns NR:ns ## COG: VC1410 COG1566 # Protein_GI_number: 15641421 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Vibrio cholerae # 23 382 28 387 406 315 51.0 9e-86 MTDAQSNVQETVPTTSASDDNMQNKRKKFLGFFALILLIAAILYAIWALFLNHSVSTDNA YVGAETAQITSMVSGQVAQVLVKDTQTVHRGDVLVRIDDRDAKIALAQAEAELAKAKRQY KQTAANSSSLNSQVVVRADEINSAKAQVAQAQADYDKAALELNRRAQLAASGAVSKEELT KAQSAVETAKAGLELAKAGLAQATSSRKAAESTLAANEALIQGVSETSTPDVQVAQAHVE QAQLDLERTVIRAPVDGVITRRNIQVGQRVAPGTSMMMIVPLNDLYVDANFKESQLKKVR PGQPVTLTSDLYGDDVEYHGKVVGFSGGTGSAFALIPAQNATGNWIKVVQRLPVRIALDP KELAEHPLRVGLSMEAKVDLSAK >gi|333032563|gb|GL891863.1| GENE 33 31158 - 32681 1464 507 aa, chain + ## HITS:1 COG:VC1411 KEGG:ns NR:ns ## COG: VC1411 COG0477 # Protein_GI_number: 15641422 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Vibrio cholerae # 10 500 12 503 511 478 51.0 1e-134 MKTQTPFAELSGGRLLLAAFVIALSNFMVVLDTTIANVSVPHITGNLAVSSTQGTWVVTS YAVAEAICVPLTGWLAGRFGTVRVFIFGLIGFTVFSFLCGLATSLEMLVFFRIGQGLCGG PLMPLSQTLLMRIFPQEKHAQAMGLWAMTTVVGPILGPILGGLISDNLSWHWIFFINLPV GIVCVLAAMRLLRVAETETISLRIDTVGLGLLILWIGALQLMLDLGHERDWFNSTSIVVL ALTAAIGFVVFLIWELTDKHPVVDVKVFRHRGFAISVLALSLGFGAFFGSIVLIPQWLQM NLSYTATWAGYLTATMGFGSLTMSPIVAKLSTKHDPRALASFGLILLGIVTLMRAFWTTD ADFMALAWPQILQGFAVPFFFIPLSNIALGSVLQQEIASAAGLMNFLRTMAGAIGASIAV TVWDDHAKVARSEMVSNLHTTEVQNTLLQNGFTADSTLGIISNLVDKEAITMSANHVFLL FAIVFVFAGLVIWLCPKPKQVSGMPSH >gi|333032563|gb|GL891863.1| GENE 34 32984 - 34969 2189 661 aa, chain + ## HITS:1 COG:MT2464 KEGG:ns NR:ns ## COG: MT2464 COG0405 # Protein_GI_number: 15841908 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 73 660 62 643 643 542 52.0 1e-154 MNKRYSFLFSSLLAVGLLQGCGDDSSSDQPKDDSNTTPPNLIVDNDPTSCSKLAQDGSSV VVGSNQNGDPAAPEGASGYRLGNTVKYADKYMVVANTPLAVKAGCDVLKAGGSAVDAAVA VQAVLGLVEPQSSTIAGSGFMMYYDAKTKQVTAYDGRETAPAAANEFYLIRQNIYDPNSP PPVPNARRSGRSIGVPGVMRLLEQAQKEHGKLEWKQLFGEAIGLADNGFRIPGRLADAIA SNASNLALDANAMATYFYPDGSPRKVGETMTNKAYARTLEALASQGANALHTGPIAQAIV AKAGQTVGDDPAKTPITPSLMTLQDLSNYQVKKRDPICTTYRDRYYVCTMPPPSSGGIAV AQTLGILENFDMSLYPPKNPENEGGVPDVMGVHLVSEAERLAYADRDKYVADTDFVRLPA QGIPSFIDKNYLKQRAALINPNQSMGVAPAGNFNTAAGVDTTVEHGTTQFTIVDAYGNVV SMTSTVESSMGSFHMVDGFLLSNQLTDFSANPYDSTGAPVANRVEGGKRPRSTMAPTLVF KGTTPDEFYMATGSPGGGTIIQYVVKTLVGALDWNLNAQQATSLVNFGATNSKNTNIDSS NVQLSLVDLIEGLKAKGHGISNTAQTSGISTIMKVNINNQSKYAGGVDPRREGIVLGNGA L >gi|333032563|gb|GL891863.1| GENE 35 35617 - 36900 357 427 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165511|ref|YP_001467745.1| 30S ribosomal protein S15 [Campylobacter concisus 13826] # 37 418 15 406 406 142 26 5e-33 MYTALYIAHFVELAGVQAMKRTEIKRRPLSDTVLANLEPESKEYRELDGEGLYFRVKPDG KKAWLFRYKKADGKWSWLGIGTYPELSGAGARKKAREIIKDISQGDNPIITKQERKRQEL EQNNATFEVLAREWLDTKANTWVKDTMTRNKGALEKHIFPIFGKRLYTSIKPIEWMNHLK GIQQHQGIYEQVNRVRAMCRDIYDFAKVTGRIDYNPLEGLQKFLQQGVKQNMSHVSEQEL PALLRAINSYPTMDVRIGLQLLAMLFCRPTELREAKWQEFDLNQGIWNIPAERMKKRREH VVPLPRQAIAILNELKTYETNSEYLFPSRSDKSKPKSDTVFIMALRRMGYEGRQTPHGFR HIASTLLNNRGFDERHIEAALAHVKDGVAGVYNKAQYLDDRKIMLQWYANHLEEIADQRI IQFKKAK >gi|333032563|gb|GL891863.1| GENE 36 37024 - 37815 279 263 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2903 NR:ns ## KEGG: ABAYE2903 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 263 1 263 263 518 99.0 1e-145 MGDAWEAVLIGANEDLDNIPKQFISVNELLEIFADLEKTTLEKSAQWLINNKQILNAAKK LVLKNEYTLVEYEHSDNDFYNCPIEALSLIASGEDCDPFSDYVGFSRYVILMSLKELGLD IGDALINNSRAYIAKNCHEYDDNFYKKQCAYLISMIGQSPALELPIQQEKDINNTYLLNP SNPNYIPAYALLLRIHHDLNTVGRFEGTKQKRVADCLEEYGQHYGVQNTPTNAIHFSNLI KVRTTAKDEASTAMKKILSQEQK >gi|333032563|gb|GL891863.1| GENE 37 38025 - 38240 144 71 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2902 NR:ns ## KEGG: ABAYE2902 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 71 7 77 77 139 100.0 4e-32 MTIKPIRVQFKTACELLDISRESLRHIQRTDETFPKAIKIGTTKQAPVYFDYAELVEWHN NQKQSLAAMEA >gi|333032563|gb|GL891863.1| GENE 38 38243 - 38452 188 69 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2901 NR:ns ## KEGG: ABAYE2901 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 69 1 69 69 126 100.0 2e-28 MNHQTVILDYLKQGKTLSQAEAIELCDCYRLSAVIQRLRLLGHNIVTHQEPNLNSKGTHA RYELKEVTA >gi|333032563|gb|GL891863.1| GENE 39 38449 - 39003 267 184 aa, chain + ## HITS:1 COG:HI1418 KEGG:ns NR:ns ## COG: HI1418 COG3617 # Protein_GI_number: 16273324 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Haemophilus influenzae # 7 122 23 124 201 100 45.0 2e-21 MNAVTHFDFKSRSVRIVLDDNQEPWFCLTDVCKALDISRSSDLLQIQRGDVKNETPKRNG ALDSKGVADYHTPTNGGIQKLKFINEPNLYRIIFRSNKTEALNFQNWVFAEVLPSIRKTG SYSARQSAYEELNRLCMQEKVSKDKGTFHSLGMHRRKYEKHLNAKRIQTCKANLQIAFDG LHHE >gi|333032563|gb|GL891863.1| GENE 40 38984 - 39364 242 126 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2899 NR:ns ## KEGG: ABAYE2899 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 126 4 129 129 239 100.0 2e-62 MGYTMNKYVNPEFFKAFDHYKAMLAQYGEHHPITEQALILTMHYTPEHIKAEMHQKAKEL NLLPPPSGYTDDGEPMYQLEDIAKHFGISFEEAEQCLLQMMDNRQQVGLSNDGVLIDSNI HINRVQ >gi|333032563|gb|GL891863.1| GENE 41 39374 - 39679 64 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|301513007|ref|ZP_07238244.1| ## NR: gi|301513007|ref|ZP_07238244.1| hypothetical protein AbauAB05_15529 [Acinetobacter baumannii AB058] hypothetical protein AbauAB059_16673 [Acinetobacter baumannii AB059] conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 101 1 101 101 199 100.0 4e-50 MKNELFDIANMPKYGYINRALSKISKLALVGYKCNKGAQSAYRAFFVRNISMRSHISMAK LERDTFGCAGFLCSLSTNPFQLCHPHLVVNGKALLKNEGAH >gi|333032563|gb|GL891863.1| GENE 42 39682 - 39798 124 38 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2897 NR:ns ## KEGG: ABAYE2897 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 38 37 74 74 68 100.0 1e-10 MPKNIHQITRQRIQSAEFAQKQGLVKRISLMLKKVWGV >gi|333032563|gb|GL891863.1| GENE 43 39804 - 40082 394 92 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2896 NR:ns ## KEGG: ABAYE2896 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 92 6 97 97 167 100.0 1e-40 MNNQNAKNTPKTYDAGDLWDIQSLAEFDMNWMEVAISDIKNRLKEIKAELGGKDVLGFYA LENVIDMYQYIAEKRHSYHAEQAEKYKKEWHG >gi|333032563|gb|GL891863.1| GENE 44 40095 - 42560 1505 821 aa, chain + ## HITS:1 COG:STM2745 KEGG:ns NR:ns ## COG: STM2745 COG5519 # Protein_GI_number: 16766057 # Func_class: L Replication, recombination and repair # Function: Superfamily II helicase and inactivated derivatives # Organism: Salmonella typhimurium LT2 # 262 717 142 597 689 254 34.0 4e-67 MNIKPAWDTKPDMFEGSISNITPQTQQSPLEEVGNGASHSIIEALEEHTVPLFNNNPLHG AMAEMVGGCPVEIRRSVIEKATQYGEADDNALYGLAVFDLYNEHLQPTGAVFTNPTIKGF KDIVFGHGGLYFNRSKLNELPLIVTDDIHLAFKTAYPIYAPYQSDKINAYTLKTLMQAHA DLCVIAPVHQQDAIQRRYSGMDVKMAFIPEPPNIAMLQDELDSMIKVAIDQAKSLAKGHL AKPFKIKEGEYLNILMDGLYLVKEHDDGEGGIKRTRTRISDSAIILGEARSLNNNNWKRV IQFNDKDNVQHTLLIPYEHFMGEAQEALKIIANHGLMPPRQPNKKNVFINYIQDYPIEKR FRCVDRTGWHGHSYVTPSKTYGDSSGEELLFNSEMKNPYAVHGSLAGWQELSRLIEPHAL GVLAFSCAFSGQLVAPLNLESGGFHIYGSSTDGKSTITKAACSVWGNPREVSKQWRTTDN ALENEAELRNDSFLNLDELRQAPPKAVSDIVYMLTGGQGKSRSSKTGKNRDSKQFNLMYT STGEVTLEEHLRRGGIELDAGLLLRFAHIPSDAGKGYGVFECVNYGSNSSDLGNRINELA AKHYGYAGIKWLEYLTSDKDVVMQQAQKLLDSFIEQHTQAKNGQANRVLRRFALVAVAGE LATLAGITEWQQGRAFEAVAQCFNTWLNSLGGGENMEETKILEHIKAFFESNGTSRFEDL TVIRQADGEVIRPRTHNRVGYYDPDDKVYLVSPTMFKKEMCIGMNEANVKKVLIKHGWIK EFIEGGKKLYVKKSSVNLPDGTRPRMMHFSTEAMQNSDSEI >gi|333032563|gb|GL891863.1| GENE 45 42893 - 43096 175 67 aa, chain + ## HITS:1 COG:no KEGG:AB57_0968 NR:ns ## KEGG: AB57_0968 # Name: not_defined # Def: single-strand binding protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 38 1 38 38 66 94.0 4e-10 MPNVKKVTVMGVLGLNPETKQFSNGGSVTTFSVATTEFWKDKTTGERKEANSINLYQQSF KECCQRP >gi|333032563|gb|GL891863.1| GENE 46 43296 - 44675 809 459 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2894 NR:ns ## KEGG: ABAYE2894 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 459 22 480 480 708 73.0 0 MSTVTLDEMRICCIKRGIEIIEIEECTFGFNQSIPAIKISIVNNVTALLPRQKLSEIQIY QNNIIPFQKQEEFWAKVDWFPPVFMNREQIGEGFKVANLKIGYHEFLPKEELQKRFQEFF PTVYNFSNIIPITVQTFSDSIAISKHVPLIKESILAFYSGMRVASIASLIPMIEDILNTI IEDSFENLDLKTKVDRCIKRAKHNIKHDHILGADWIPEEYVQDDVLKVMNVRIRIIELIG NWLKNSFYENTENYQNTSGFNRHFFAHAKSEIWQNQSNFFRAMGLIQALAFIECFAMKES KLSIFPPTPDIRSESFRNDVFACLNLQVIKNTLLQQLQIDGCLPFNPTASDDGWLGRSAT LSTKMNDEIVKRLRDNGWQCHSFGQPVKSGGYITVRASKLGKEIGIALLYSCATDNKVYK ELEVTNDYILYQGAPYQQESFAYGINKYVGPLNAWLAPD >gi|333032563|gb|GL891863.1| GENE 47 45018 - 45692 232 224 aa, chain + ## HITS:1 COG:no KEGG:AB57_2685 NR:ns ## KEGG: AB57_2685 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 6 221 1 216 230 233 52.0 7e-60 MIAIYLDESGDLGWTFTAPYGKGGSSRTLTIACVICPRDKTQHLNRIVTGFYKARKRPLN NELKSYDLSSKEKEQFVQQIIKLHSNHPDIKLLSITVNKKRVKTKLRNDPNALYNYMVKN MLLNHLCNHKHIDFIPDSRCEKVNVGWNLEIYLKQMIAERSQLDDVLNETLNVKPFDSRV TKELQFIDFYAGLVWSKYEFKDERVDQYFDVANPSNQLMFFEYQ >gi|333032563|gb|GL891863.1| GENE 48 45692 - 45880 158 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260555814|ref|ZP_05828034.1| ## NR: gi|260555814|ref|ZP_05828034.1| predicted protein [Acinetobacter baumannii ATCC 19606] conserved domain protein [Acinetobacter baumannii 6013150] conserved domain protein [Acinetobacter baumannii 6013113] conserved domain protein [Acinetobacter baumannii 6014059] predicted protein [Acinetobacter baumannii ATCC 19606] conserved domain protein [Acinetobacter baumannii 6013150] conserved domain protein [Acinetobacter baumannii 6013113] conserved domain protein [Acinetobacter baumannii 6014059] # 1 62 1 62 62 97 100.0 2e-19 MKAFFRSVSLAPIRKANQNMIDGKRADVLSLPTSIQQDILNRRYSADEINSAYARAISKR EN >gi|333032563|gb|GL891863.1| GENE 49 46083 - 46601 194 172 aa, chain + ## HITS:1 COG:no KEGG:RPSI07_1631 NR:ns ## KEGG: RPSI07_1631 # Name: not_defined # Def: hypothetical protein # Organism: R.solanacearum_PSI07 # Pathway: not_defined # 14 164 58 203 208 101 38.0 1e-20 MLYAFMCGAHLDSIINEIRELEKPSKHYKRMKPATKFIKQPLEGLWHKHYEQVGLKSMAM NIKQQMGLNNKQQKIFNNTFFKEFCDIFNNSEIPQDKRIEALGYLCSGKQYIDRINDGKL TGEWIIYHHCNGKNYYLNVGNHSDGDDALAQEIREIALFEFPFFKGSLPIFD >gi|333032563|gb|GL891863.1| GENE 50 47723 - 47902 122 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874199|ref|ZP_08442122.1| ## NR: gi|332874199|ref|ZP_08442122.1| hypothetical protein HMPREF0022_01735 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_01735 [Acinetobacter baumannii 6014059] # 1 59 1 59 59 105 100.0 1e-21 MVFLMWCCKTRNKVKILYGSLQAMGISLTESNTHQETVSFDTYSFEAVLMVFLLVSYQG >gi|333032563|gb|GL891863.1| GENE 51 49203 - 50250 492 349 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00862 NR:ns ## KEGG: ACICU_00862 # Name: not_defined # Def: putative ABC oligo/dipeptide transport, ATP-binding protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 349 1 349 573 667 100.0 0 MTSNITQLKKIKVNHFRGLKNIEINLGDRLTVICGKNGTSKSTILGMIAQIFNFDKNHFD GSDINFKTLAGKNFKSSFREHFRFSKTYDLPGTMDVEFEIFDAYFKKIIPDLKLRLYGSE DRPQSRPVVRDNLKVDAEDNSSRNVTHPLIYLSLKRLMPIAERSKYSLNSEEVEYFTRIS REFTITNNRLLGKISGTTVSKTTGTIESAVVHGNNYDHESVSVGEDNTGQILMALFSFQK LKEEYVDYHGGILLIDEIDAGLFPAAQVELIKILESFAKRLNLQIIFTTHSPIVIQNIFE KSKYDKSNNKTIYLTDTYGGVEVAENYSWDKIYADLFIDTIQFDVEKKI Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:56:59 2011 Seq name: gi|333032562|gb|GL891864.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld96, whole genome shotgun sequence Length of sequence - 35360 bp Number of predicted genes - 34, with homology - 34 Number of transcription units - 23, operones - 7 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 19 - 789 348 ## ACICU_03036 hypothetical protein - Prom 810 - 869 8.6 - Term 847 - 890 7.4 2 2 Op 1 21/0.000 - CDS 921 - 2390 2034 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 3 2 Op 2 31/0.000 - CDS 2390 - 3868 437 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 4 2 Op 3 . - CDS 3922 - 4236 355 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit - Prom 4456 - 4515 4.9 + Prom 4234 - 4293 5.1 5 3 Op 1 22/0.000 + CDS 4370 - 5410 1453 ## COG1077 Actin-like ATPase involved in cell morphogenesis 6 3 Op 2 . + CDS 5427 - 6284 879 ## COG1792 Cell shape-determining protein 7 3 Op 3 . + CDS 6271 - 6762 438 ## ABSDF0682 rod shape-determining protein 8 3 Op 4 8/0.000 + CDS 6750 - 7310 402 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Prom 7343 - 7402 4.5 9 3 Op 5 . + CDS 7424 - 8878 1231 ## COG1530 Ribonucleases G and E + Prom 8894 - 8953 3.9 10 4 Tu 1 . + CDS 9018 - 9191 270 ## ABBFA_000690 hypothetical protein + Term 9352 - 9386 1.8 - Term 9176 - 9213 4.0 11 5 Tu 1 . - CDS 9221 - 10606 1154 ## ACICU_03026 bifunctional protein wax ester synthase/acyl-CoA diacylglycerol acyltransferase (EC:2.3.1.20) - Prom 10656 - 10715 7.7 - Term 10722 - 10773 14.0 12 6 Tu 1 . - CDS 10778 - 11542 1048 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes - Prom 11565 - 11624 3.6 + Prom 11564 - 11623 5.3 13 7 Tu 1 . + CDS 11697 - 12314 718 ## COG0560 Phosphoserine phosphatase + Term 12333 - 12373 10.1 - Term 12316 - 12365 11.6 14 8 Tu 1 . - CDS 12382 - 13893 1809 ## COG2067 Long-chain fatty acid transport protein - Prom 14133 - 14192 7.6 15 9 Tu 1 . - CDS 14492 - 15190 717 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 15372 - 15431 4.7 + Prom 15164 - 15223 3.8 16 10 Tu 1 . + CDS 15354 - 16388 774 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 16489 - 16523 3.2 - Term 16381 - 16420 3.5 17 11 Tu 1 . - CDS 16431 - 17423 900 ## COG3239 Fatty acid desaturase - Prom 17463 - 17522 8.3 18 12 Tu 1 . - CDS 17530 - 18330 737 ## ABSDF0695 hypothetical protein - Prom 18414 - 18473 6.9 19 13 Tu 1 . + CDS 18686 - 19504 925 ## COG1968 Uncharacterized bacitracin resistance protein + Prom 19519 - 19578 5.0 20 14 Op 1 2/0.111 + CDS 19663 - 20556 652 ## COG2207 AraC-type DNA-binding domain-containing proteins 21 14 Op 2 . + CDS 20603 - 21601 1178 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Term 21614 - 21659 8.6 + Prom 21612 - 21671 8.1 22 15 Tu 1 . + CDS 21804 - 22679 987 ## COG0693 Putative intracellular protease/amidase - TRNA 22693 - 22765 67.7 # Arg CCT 0 0 - Term 22773 - 22819 9.4 23 16 Tu 1 . - CDS 22842 - 24134 1159 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 24240 - 24299 10.3 + Prom 24298 - 24357 6.2 24 17 Tu 1 . + CDS 24577 - 25764 1553 ## COG2828 Uncharacterized protein conserved in bacteria + Term 25777 - 25822 12.0 + Prom 25809 - 25868 4.0 25 18 Op 1 . + CDS 25923 - 26834 967 ## COG0142 Geranylgeranyl pyrophosphate synthase 26 18 Op 2 . + CDS 26894 - 27262 326 ## COG2315 Uncharacterized protein conserved in bacteria - Term 27256 - 27305 7.1 27 19 Op 1 26/0.000 - CDS 27330 - 28184 1139 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 28 19 Op 2 . - CDS 28213 - 28674 513 ## COG1585 Membrane protein implicated in regulation of membrane protease activity - Prom 28694 - 28753 1.7 29 20 Op 1 . - CDS 28780 - 29697 1037 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily 30 20 Op 2 . - CDS 29765 - 30391 547 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 30415 - 30474 5.1 + Prom 30439 - 30498 5.7 31 21 Tu 1 . + CDS 30519 - 31766 952 ## COG0477 Permeases of the major facilitator superfamily + Prom 32033 - 32092 7.0 32 22 Tu 1 . + CDS 32312 - 33616 1663 ## ACICU_03005 putative DcaP-like protein + Term 33641 - 33686 11.6 + Prom 33669 - 33728 12.1 33 23 Op 1 . + CDS 33848 - 34714 410 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase 34 23 Op 2 . + CDS 34663 - 35359 384 ## COG2194 Predicted membrane-associated, metal-dependent hydrolase Predicted protein(s) >gi|333032562|gb|GL891864.1| GENE 1 19 - 789 348 256 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03036 NR:ns ## KEGG: ACICU_03036 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 254 1 254 411 435 99.0 1e-121 MLDFHTAMASGGFATLSDISYGFSIETSLNWTVFLTSILKTTNLIDLIALETIDKKIKKL FKEYVQNSSLDIFSEFNKVISELKIYSQKTNFFYFIIQGLNCDKIYSFENITLGNFNEKN SNNISFSEKINKNIKLVIDERKRNGTFNPKDIFLKELKNTIKKYKNKTVIEISNLGDPLM AKEKSKNDAKELINQIIFITHISKSYKFHIQVHTYEVKDRIQPLCVNYDELSTSALSDEI IYNVDFSFSQRNNMAE >gi|333032562|gb|GL891864.1| GENE 2 921 - 2390 2034 489 aa, chain - ## HITS:1 COG:PA4484 KEGG:ns NR:ns ## COG: PA4484 COG0064 # Protein_GI_number: 15599680 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Pseudomonas aeruginosa # 13 486 3 477 481 640 69.0 0 MAEAQKLKLIDGWEVVIGIEIHTQLATNSKIFSGSSTEFGQDPNTQASLVDLAMPGVLPV LNEKVVELAIRFGLGIDAYIDQASVFARKNYFYPDSPKGYQISQMDNPIVGLGHIDIQLE DGTTKRIGVTRAHLEEDAGKSVHDQFEGMSGIDLNRAGTPLLEIVSEPDMRSVEEAVAYI KAIHTLVRWLGISDGNMAEGSFRADCNVSLRRPGQPFGTRCELKNLNSFRFIEQAINVEI ERQMEILEWGGEIDQETRLFDPNKMETRSMRSKEEANDYRYFPDPDLLPVIIPDEQIEAI KATMPELPAARRARFIADFGVTEYDAHVLTLSREMADFYEAVVAAAGGAKQGKIAANWVM GEFSGALNKAGLELTDSPVSAEQLGGMIARIIDNTISGKIAKQVFGFMWESEGKSADDII AEKGLKQETDTGAIEAIIKEVLAANEKMVEEYKSGKEKAFNGLVGQVMKASKGKANPAQV NELMKKLIG >gi|333032562|gb|GL891864.1| GENE 3 2390 - 3868 437 492 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 11 475 11 452 468 172 29 2e-42 MTDLHRLSIRELAEGLSQAKFSSRELTEHYLKRIAKIDPQVKSYVTVTPEQALREADAAD AALKAGNATALTGIPLAHKDIFCTKGIKTTAGSKMLDNFISPYDATVVEKTKAAGLVTLG KVNMDEFAMGSTSESSYVGATSNPWALDHVPGGSSGGSAAAVAADLAPFATGTDTGGSIR QPASFCGLTGLKPTYGRVSRFGIIAYASSLDQAGPMARSAEDCAYLMNVIAGHDAKDSTS VKKEVDDYVANLNNTSVKGLRIGIPKQYFNVAGLDADVKARVEESLKKLEEMGAALVEID LNMTEAYVPTYYLIAPAEASSNLSRYDGVRYGYRCENPADLMDLYKRSRSEGFGPEVQRR ILIGTYALSAGYYDAYYVKAQKVRRLIQQDFLKAFENVDVIAAPAAPTTAYKIGASLDPV EMYLGDIYTIAVNLAGLPAINAPVGFDKDNLPVGLQLIGNYWSESQLLSIVHQYQQNTDW HTKRAAIAEENA >gi|333032562|gb|GL891864.1| GENE 4 3922 - 4236 355 104 aa, chain - ## HITS:1 COG:PA4482 KEGG:ns NR:ns ## COG: PA4482 COG0721 # Protein_GI_number: 15599678 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Pseudomonas aeruginosa # 12 104 3 95 96 88 49.0 2e-18 MSTSDAQHSADLNAQTVSAIANLARLSLNDTQSAEYAQSLNKILGMMETLKGIDTEGVEP LKSPFDNPQPLRADVVTESNHRDEYQAVAPATQDGLYLVPRVIE >gi|333032562|gb|GL891864.1| GENE 5 4370 - 5410 1453 346 aa, chain + ## HITS:1 COG:PA4481 KEGG:ns NR:ns ## COG: PA4481 COG1077 # Protein_GI_number: 15599677 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Pseudomonas aeruginosa # 2 343 1 342 345 459 69.0 1e-129 MILKRLIGLFSPDLAIDLGTANTLIYAPGRGIILNEPTVVAIRHSGSQKIVAAVGLDAKQ MLGRTPANISAIRPMKDGVIADFEVTETMLNQFIGKVHEKRLFPPAPRVVVCVPCKSTLV ERRAIREAVFNAGARDVRLIEEPMAAAIGAGMPVEQACGSMVVDVGGGTTEIAIISLQGC VYADSLRIGGDVFDEQIINYVRKAHGCVIGETTAEIIKKEVGMAVSDGTTLEIEVRGRNL AEGVPRAITVTSDEITQAISDPLQSIVSAVKSALEQTPPELSSDIAERGIVLTGGGALLR NLDKLLAQETGLPVVVAEDPLTCVTRGGGKVLEFFDNPNHDMLFVG >gi|333032562|gb|GL891864.1| GENE 6 5427 - 6284 879 285 aa, chain + ## HITS:1 COG:PA4480 KEGG:ns NR:ns ## COG: PA4480 COG1792 # Protein_GI_number: 15599676 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Pseudomonas aeruginosa # 17 284 1 266 330 197 40.0 2e-50 MQPNIFSRQPPSFRSFIIAVITCLVVLFFDWRMPYVIQPARDVLYAAYNPIYALASYPVL SREWLNQQTKSETQLRRENTAMQAELLQAQVRLQKLSELSAENTRLRGLLDTPLIIDGRM EIAEVIGTDADPLRHIIIINRGAMDHLKVGQTVLDDKGIMGQIINVYPHSSRVMLLSDKE HSLSVRLERTGMRAIVSGTGDLGRLKMEYVPTSANIQVGDKVLSSGLGEHFPAGYAVGTV AKIRRHNSGEFAEIDVTPAAQLATGHHVVVLFSDSLAKEQPYADR >gi|333032562|gb|GL891864.1| GENE 7 6271 - 6762 438 163 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0682 NR:ns ## KEGG: ABSDF0682 # Name: mreD # Def: rod shape-determining protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 163 1 163 163 274 100.0 9e-73 MPIAKLKREKRKDPLWGIILSIIVGSVLMIYPLSYDISGWRPLFMLMIMLFWVVCQPTWC GVWFAFGMGIFTDLLLDAPLGLNALSFVIVTFITRFLIRERRILTFGNLWTIATLVIIAH LAFMWVTQTMGGIHFSIARHWQPLMTSILTWPVVYYCLAKWRI >gi|333032562|gb|GL891864.1| GENE 8 6750 - 7310 402 186 aa, chain + ## HITS:1 COG:STM3371 KEGG:ns NR:ns ## COG: STM3371 COG0424 # Protein_GI_number: 16766666 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Salmonella typhimurium LT2 # 1 181 1 182 197 153 46.0 2e-37 MAHLVLASSSPRRRELLQQLGLNFEIYSPDIDESVHEGELVHQYVERLAREKAQAVLNIF PDSVIIAADTSLGLDGQIIGKPDSKQHAFDIWKQLSGRWHDVFSGICIATQQHILSQVVQ TQVEFASLTTQDMEDYWATGEPVGKAGAYAIQGIASQYIPKIQGSYSNVVGLPLYEFSQL FKRVKT >gi|333032562|gb|GL891864.1| GENE 9 7424 - 8878 1231 484 aa, chain + ## HITS:1 COG:PA4477 KEGG:ns NR:ns ## COG: PA4477 COG1530 # Protein_GI_number: 15599673 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Pseudomonas aeruginosa # 1 483 1 484 485 540 60.0 1e-153 MSEELLINVTPMECRVALIENGTVNELYVERTVKRGLVGNIYKGKVVRVLPGMQAAFVDI GLSRTAFLHINDMVWPRSQPTPNVFELLHPGQILTVQVMKDMLGTKGARLSTDLSIPSRY LVLMPYGNHIGVSQRIESEEERDRLRNIIESIQAEHNLPGSVIVRTAAEGVDEAEIAQDM CYLSKLWEYIQRKQVDVAVPSLIFEELPLPQRIIRDLASEETAKIYVDSREIHGKLREFV DEFVPNMQSRLIHYPGERPLFDLYNVEEDIQKALQTRVALKSGGYLMIDQTEAMTTIDVN TGSYVGGRSLEDTVFKTNMEATQVIARQLRLRNLGGIIIIDFIDMQEAIHREEVMRQFEK MLERDHAKTKITQVSELGLVEMTRKRTRESLEHLLCESCPTCQGRGFVKTAETVCYEIFR EILRYTRAFESTSGFTVVAHPSVIDRLLTAEAPAVADLEHFINRVIKFQVENLYTQEQYD IILS >gi|333032562|gb|GL891864.1| GENE 10 9018 - 9191 270 57 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000690 NR:ns ## KEGG: ABBFA_000690 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 57 1 57 57 101 100.0 1e-20 MNVSENLISNGLKHVLESTPVNSCYMLNDQGKEVPITTAMIRSVCHQLLNQCRAIKK >gi|333032562|gb|GL891864.1| GENE 11 9221 - 10606 1154 461 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03026 NR:ns ## KEGG: ACICU_03026 # Name: not_defined # Def: bifunctional protein wax ester synthase/acyl-CoA diacylglycerol acyltransferase (EC:2.3.1.20) # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 461 1 461 461 921 100.0 0 MRPLHPIDFIFLSLEKRQQPMHVGGLFLFEIPENAPETFVHDLVEEIRQSKSIPVPPFNN RLNGLFWDEDEEFDIDHHFRHIALPHPGRIRELLVYISQQHSSLIDRAKPLWTCDIIEGI EGNRFAMYFKIHHAMVDGVAGMRLIEKSLSKTPEEKHVVPLWCVESKRTKRLKVPKPSTS KIKSILGGIKSQLEVTPKVMQELSQTIFKEMGKNPDYVSTFQAPVSILNQRVSASRRFAA QSFELSRLRKISKALGVTINDVVLAVCSGALREYLISHNSLPRKPLIAMVPASLRTDDSD VSNRITMILANLGTHKDQPLERLEIIRRSMQNSKQRFSRMTANEILNYSAVVYGPAGLNI MSGMLPKRQAFNLVISNVPGPREPLYWNGAKLDALYPASIVMDGQALNITMTSYLDKLEV GLTACRNALPKMQNLLTHLEDEIQRFEEIIEEKQLKHHSAS >gi|333032562|gb|GL891864.1| GENE 12 10778 - 11542 1048 254 aa, chain - ## HITS:1 COG:PA1756 KEGG:ns NR:ns ## COG: PA1756 COG0175 # Protein_GI_number: 15596953 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Pseudomonas aeruginosa # 22 252 32 263 267 333 65.0 1e-91 MRPSLLPGTPMTVIPTIDIVDALAAEYAAKSPREILELALSQQGEIAISFSGAEDVVLID MASRLGKPFRVFSLDTGRLHPETYQFIETVRKHYNINIEICFPDAEAVQSMVNEKGLFSF FKDGHQECCGIRKVQPLRKKLATLDGWITGQRKDQSPGTRTEIPVVQADAGFSGPGKQLI KYNPLANWSSADVWSYIRMMEIPYNPLHERGFVSIGCEPCTRPVLPNQHEREGRWWWEEA TQKECGLHAGNLKK >gi|333032562|gb|GL891864.1| GENE 13 11697 - 12314 718 205 aa, chain + ## HITS:1 COG:PA1757 KEGG:ns NR:ns ## COG: PA1757 COG0560 # Protein_GI_number: 15596954 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 1 203 1 203 205 282 66.0 3e-76 MEIVCLDLEGVLVPEIWINFAKKTGIKELEATTRDIPDYDVLMTQRLNILKQHGLGLKDI QEVIAEMGPLPGAKEFVEWVSNHFQLVILSDTFYEFAHPLMKQLGWPTIFCHKLETDENG MITAYKLRQPDQKRESVKALHGLNFRVIAAGDSYNDTTMLGEADHGFLFDAPANVIAEFP QFPAINGYDALKEAIRSVSQRNIPA >gi|333032562|gb|GL891864.1| GENE 14 12382 - 13893 1809 503 aa, chain - ## HITS:1 COG:BMEI1025 KEGG:ns NR:ns ## COG: BMEI1025 COG2067 # Protein_GI_number: 17987308 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Brucella melitensis # 264 469 75 261 296 102 33.0 1e-21 MKLKHLSTAMILATLPATGVFAAALDRSGQSMSAFFQPGNYFEAGISVLDPDVAGKEAGS SATRRDIGDMANDYYFPSAALKLQINDQFSFGLLYDQPFGADAEYSGNNVFVSNPGSDTI LSQKALGDLASSSIQKLVQASGSAFTPALIEVTKVTGGDPTKPTQTEILGALQQVAAGGN TTVGAGLTALQKTQAAINAANNYLGTGGTKVKVDTQNLSFVFGYQPTKNFNFYAGPVLQT VKGNVSLRGQAYSLYNGYDANIKETTGAGWLAGAAYQIPEIALRASVTYRSEIDHKVNID ENLSILNFPGLTSVLAGLDVPASKLQAINSSGKTTITTPQSVNLDFQTGIMADTVAFANV RWVNWKDFSIQPYKFGKVSEAVGGLVGRPNGFNLVEYSDDQWSVNAGVGRKLNDKWAGNV SVGWDSGAGNPVTTLGPTEGYWNVGLGVQYSPTPQTFIAGGVKYFWLGDAKAQTGAQAGS DEYVADFSDNNAIAYGLKLGYKF >gi|333032562|gb|GL891864.1| GENE 15 14492 - 15190 717 232 aa, chain - ## HITS:1 COG:PA4975 KEGG:ns NR:ns ## COG: PA4975 COG2249 # Protein_GI_number: 15600168 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Pseudomonas aeruginosa # 1 232 1 232 234 309 63.0 3e-84 MNILIVHAHPEPLSFTTSLKTTAQQTFKKLGHQVEISDLYAMQFNPVASKEDFLELNQPD YFNYALEQRNATKQQLLATDIQAEIDKVNRADLVILNFPLYWTSVPAILKGWIDRVFVSG LFYGGKRFYNHGGMAGKKAMLCLTLGGRTHMFGENSIHGPIEHYLSPIQRGSLAYTGFEV LPPFIAYHVPYISQEARETILEDYVTYLTHLDQLEPLKFPKLEEFDEKLYPL >gi|333032562|gb|GL891864.1| GENE 16 15354 - 16388 774 344 aa, chain + ## HITS:1 COG:PA0831 KEGG:ns NR:ns ## COG: PA0831 COG2207 # Protein_GI_number: 15596028 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 2 332 8 336 339 116 28.0 8e-26 MTPELPGTYINLLVEIVKRRGISCEQFLEGSGVTPEQLKKPYWYVEFNILNNLLEHAIQL THEPALAGYLALEMKASCYGSVGMAAMVSANLEEALKILEQFIGSRCDAFKPELKQEQDD VYWSIHQPLKSFQLSSDATIFLLLGFVYIAKHLTGVSSLGTVQLNMPEPLGFSKIKDKLG VSCLFEQKHNIWIIPKEYLMQPVLTADPMLAPLLKAQCKKDIDKLKLRSGWKAEISQVIK KLLINSQGEILKVKQVAQMMNMSERSLQRYLAIENTSFSALVDLTRKQYAQDLLQNSSMS IEAVALSLGYADTPHFTRAFKRWMGVTPKYYQTQLKLKNLEIRE >gi|333032562|gb|GL891864.1| GENE 17 16431 - 17423 900 330 aa, chain - ## HITS:1 COG:CC3422 KEGG:ns NR:ns ## COG: CC3422 COG3239 # Protein_GI_number: 16127652 # Func_class: I Lipid transport and metabolism # Function: Fatty acid desaturase # Organism: Caulobacter vibrioides # 4 325 17 325 329 183 36.0 4e-46 MNAQVSVTDLFSREEIQELTEPSDAYGAWAVASTWAVIGGTFASLIMMWDYLPSWGKLLA CMLALAVLAGRQLCLAILMHDASHKSLFKNKKINDFVGEWLCARPIWNDLQKYRVHHVRH HAKTSTPDDPDLSLVAGFPVSKQSLTRKFLRDLTGITGLKFSLGRVLMDLDVMKWTVAND QIWLDRSDKNFVDYAKSIAKNSTGAIATNLLLYGVLKACGQQRFYWLWPLAYLTPFPLFL RIRSMAEHAGMQTSNTALTNTRTTRAGWIARSFVAPIHVNYHMEHHLMASVPYFKLPRMH KILRERGHVPTPPSYFEVIHILSSKQELTN >gi|333032562|gb|GL891864.1| GENE 18 17530 - 18330 737 266 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0695 NR:ns ## KEGG: ABSDF0695 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 266 1 266 266 517 100.0 1e-145 MKNTKINARHLIIDLFLSSAYPQLSIKQILVAAKLFNLSENGIRVATTRLLNEGMIQSVE RGIYQLSPSAKDWAKVILNRKNGIKQTKEWQQHYLAVFTGTLGRIDRTALKKRERALRQF GFKELETGIYIRPDNLAYSFEKTCDELVLAGLEKEAKICIIQHVDSTTLKQIFSLWDTKQ LEKNYEMYSRDITHWLENYAHSPLNDAAVKALLLGRETIALLMNDPLLPEPFVNESARNQ FAQDVQQLDAIGQKLWKKIYEQELNL >gi|333032562|gb|GL891864.1| GENE 19 18686 - 19504 925 272 aa, chain + ## HITS:1 COG:RSc0701 KEGG:ns NR:ns ## COG: RSc0701 COG1968 # Protein_GI_number: 17545420 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Ralstonia solanacearum # 7 265 7 284 293 244 49.0 9e-65 MENFEVIKALFLGFVEGLTEFLPISSTGHLILFGHIIDFHSDGGRVFEVVIQLGAILAVC WLYRQKIINLIKGFFSGDVESRHFAISVLIAFFPAVIIGVLAVDFIKSVLFSPIVVAIAL IVGALIIFWVESKQFEHKTDDATKITFKQALLVGLAQCVAMIPGTSRSGATIVGGMFAGL SRKAATEFSFFLAMPTMLGAATFDLIKNADVLTSDNMVNIGVGFVAAFIAALLVVKALVL FVERHTLRVFAWYRIVLGVIILIAAMFFNLSA >gi|333032562|gb|GL891864.1| GENE 20 19663 - 20556 652 297 aa, chain + ## HITS:1 COG:YPO0679 KEGG:ns NR:ns ## COG: YPO0679 COG2207 # Protein_GI_number: 16121002 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Yersinia pestis # 5 292 6 287 297 172 34.0 9e-43 MQQNDLTKSLVEAFLYLAPQEGLYPTHISNITLMRVDHSTQPVAVLQEPSIVLVIQGVKR AYIGKDIFKFQQGQCLFISIAIPFDCDTLVEREPMLAIAIKFEPQMMAELAAKMDKEQRP LIEDFDNKEIKLSCGLNIIEMNSVISDVALRLLNLLRSKQDTAILGEQVKRELIYRVLQA GGGDFIQNLSAIMSRSGVIYTICEIIQRDYYRNLTVQELAKQAGMSVSLFHQAFKKVTNY SPLQYIKITRLHKARDLILNNQMGVAEAAYEVGYVSASQFSREFKRLFGVPPKLSTN >gi|333032562|gb|GL891864.1| GENE 21 20603 - 21601 1178 332 aa, chain + ## HITS:1 COG:AGc1508 KEGG:ns NR:ns ## COG: AGc1508 COG0604 # Protein_GI_number: 15888165 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 331 18 348 348 351 52.0 9e-97 MNLPTTMKIVEITVPGGPEVLKLQDSNVPVPQADEVLIEVKAVGINRPDVLQRMGLYPMP KGVTQIPGLEVAGVVVAVGEQVQQFKVGDKVCALTNGGGYAEYCAVTATQVLPIPENLSF TQAAAIPETFFTVWANLFDIGRLKKDETTLIHGGASGIGTTALAICHALGIKTFATVGSE DKVEALSDLTTAINYKTQDFEQEILNHTQEQGVDVILDIVGGSYFQKNLNLLKRDGRLVI IGFMGGRIAKEFDLQKLILKRATITGSTMRARNSQEKAQIAQSLHEHVWPLLEQGKCLPQ IYKTYAFSDVQSAHACMEQGDHIGKIVLEMNA >gi|333032562|gb|GL891864.1| GENE 22 21804 - 22679 987 291 aa, chain + ## HITS:1 COG:PA1135 KEGG:ns NR:ns ## COG: PA1135 COG0693 # Protein_GI_number: 15596332 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 1 286 1 286 291 430 73.0 1e-120 MNTPASNDKNPTPDLAEDNAFFPSPYSLSQYTSPKTDYDGTTYPTPYAGNKKVLMIATDE RYIQMQNGKFFSTGNHPVEMLLPMFHLDNAGFEIDVATLSGNPAKLEMWAMPKQEQVVLD TFQKYADKLKNPLKLADILENVVGENSPYAAVFIPGGHGVLAKIPHSLEVKKVLKWAVEQ DKFIITLCHGPASLLAAAVDEQPENYIFKDYQICVFPDSLDKGANIDIGYMPGALPWLVG ENLEKLGVKILNTGITGQCHRDRKLLTGDSPLASNNLGKLAAETLLAEVKD >gi|333032562|gb|GL891864.1| GENE 23 22842 - 24134 1159 430 aa, chain - ## HITS:1 COG:PA3000 KEGG:ns NR:ns ## COG: PA3000 COG1113 # Protein_GI_number: 15598196 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Pseudomonas aeruginosa # 1 424 25 455 469 505 64.0 1e-143 MGGAIGTGLFLGSAQVIQSAGPSIILGYAIGGLIAFLIMRHLGEMIVEEPVAGSFSHFAY KYWGKFPGFLAGWNYWMLYVLVAMSELTAVAKYINYWWPHIPAWTSVLFFFVVITAINLT NVKFYGESEFWLAIIKVAAVISMIVFGLYLLFTADVGSSISFSNLWSHGGFFPNGFSGLF YMLAFLMFAFGGIELIGMAAAEAKDPKKTIPKAINQVVFRILIFYIGSLAILLSLVPWNQ LDLGGLDKSPFVMIFSQMGIGWAAHLLNFIILTAALSVYNSGMFANSRMLYGLAQQGNAP KIFKKVNKQGVPVPAVLLSALLIFGCVLLNYFVPEDALSHLMYIVVGALVLNWAMISMTH LKFKSAMKKLGQKTHFPALWAPFSNYLVLGFIAVVLYIMWSQGFKESVMMIPIWIVLMFI LFKVLNAKEQ >gi|333032562|gb|GL891864.1| GENE 24 24577 - 25764 1553 395 aa, chain + ## HITS:1 COG:PA0793 KEGG:ns NR:ns ## COG: PA0793 COG2828 # Protein_GI_number: 15595990 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 395 1 395 395 583 74.0 1e-166 MSFVPQIKIPATYMRGGTSKGVFFKLDDLPEKAQVAGQARDQLLLRVIGSPDPYGKQIDG MGGATSSTSKTVILAKSTQPDHDVDYLFGQVSIDQAFVDWSGNCGNLTAAVGSFAISNGL VDADRIPENGLCTVRIWQKNIQKTIIAHVPIINGQVQETGDFELDGVTFPAAEVQIEFLD PADDGEEGGDMFPTGNVVDQLDVPEIGSFQATFINAGIPTIFLNAEDLGYEGTELQDHIN GDAAALARFEKIRAYGAVQMGLIKDISEAAARQHTPKIAFVSKPKNYTASSGKNVSENDA DLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEREAVRFGHPSGTLRVGA QAELTNGQWVVKKAIMSRSARVLMEGWVRVPGDSF >gi|333032562|gb|GL891864.1| GENE 25 25923 - 26834 967 303 aa, chain + ## HITS:1 COG:VC0890 KEGG:ns NR:ns ## COG: VC0890 COG0142 # Protein_GI_number: 15640906 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Vibrio cholerae # 10 303 3 294 294 214 45.0 1e-55 MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATA SLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGD ILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDE LENIHRNKTGALIQAAIMMGAVTIFSGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTE TLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFDALAHFGENAKELVEISQFLLA RTN >gi|333032562|gb|GL891864.1| GENE 26 26894 - 27262 326 122 aa, chain + ## HITS:1 COG:ECs0617 KEGG:ns NR:ns ## COG: ECs0617 COG2315 # Protein_GI_number: 15829871 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 1 119 1 119 122 127 52.0 5e-30 MNGEQLHQLAIEAARNLPFSEQTHPFGPEYEVFKILEKMFMLTVEVSGIKMINVKCDPYK SQEYQELYPFIIPGYHMNKKHWISIKPHKNLTSDFLRDLIGDSYDLVVKKLPLKDQKRLN NQ >gi|333032562|gb|GL891864.1| GENE 27 27330 - 28184 1139 284 aa, chain - ## HITS:1 COG:XF0185 KEGG:ns NR:ns ## COG: XF0185 COG0330 # Protein_GI_number: 15836790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Xylella fastidiosa 9a5c # 8 281 25 312 337 210 40.0 3e-54 MPVGTIIVLAFLAFVAVTIFKGVRIVPQGYKWIVQRLGKYHSTLNPGLNFVIPYIDDVAY KVTTKDIVLDIPSQEVITRDNAVLLMNAVAYINLTTPEKAVYGIENYTWAIQNLVQTSLR SIVGEMDLDDALSSRDHIKAKLKAAISDDISDWGITLKTVEIQDIQPSSTMQAAMEAQAA AERQRRATVTKADGEKQAAILEADGRLEASRRDAEAQVVLAEASQKAIEMVTSAVGDKEI PVAYLLGEQYVKAMQDMAKSSNAKTVVLPADVLNTIRGIMGKHN >gi|333032562|gb|GL891864.1| GENE 28 28213 - 28674 513 153 aa, chain - ## HITS:1 COG:PM0888 KEGG:ns NR:ns ## COG: PM0888 COG1585 # Protein_GI_number: 15602753 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Membrane protein implicated in regulation of membrane protease activity # Organism: Pasteurella multocida # 8 72 10 74 149 58 35.0 6e-09 MEFVVEPWHWFVLGILLILSELILPAFAALWFGIAAIMVCFLYWLFPDISLTTQIVLWIV LSVLCTLLWFKFIKPLSIDKTKAGLPREATIGQIGMVIQTGLAHDQIIVRFPMPILGADE WNCRSTTPVKVGDRVRVIDISGNDLIVQPHSTS >gi|333032562|gb|GL891864.1| GENE 29 28780 - 29697 1037 305 aa, chain - ## HITS:1 COG:XF0066 KEGG:ns NR:ns ## COG: XF0066 COG1752 # Protein_GI_number: 15836671 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Xylella fastidiosa 9a5c # 39 292 96 349 395 272 52.0 6e-73 MKIAQFASIGFISLALFGCDKFSKTPTPTTSVKAREPVIALALGGGGAKGFSHIGVIKVL ESHGIKPKIVTGTSAGSFVGSIYASGQTPYQLQNLALKLQESDIRDLTLNRQGIILGQKL QDYVNRNVGNKPIEKFPIRFAAVATRLDNGQKADFIKGNAGQAVRASCSIPNVFVPATIG KQKYVDGGLVSPIPVKTARDMGADIVIAVDISARPAGNRPANMWGLLDQTINIMGQQSIN EELKQANVVIQPKVGHLGTLDLKSSNEAILEGEKAAQGQIRQIETAIANFKKSPAAFKPA PRPKF >gi|333032562|gb|GL891864.1| GENE 30 29765 - 30391 547 208 aa, chain - ## HITS:1 COG:CC1900 KEGG:ns NR:ns ## COG: CC1900 COG0204 # Protein_GI_number: 16126143 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Caulobacter vibrioides # 28 192 16 179 196 120 39.0 2e-27 MEQHFPNLPSQVPQRGNALSRALFKKLFLAQGWTIEGEVPNFPKAVAIISPHTSNIDGWY GFLAIFGLGIQITVLGKDSLFKPPFKRVLDWAGVIPVKRDSANGLTEQVVATIQQYDKIW IGMAPEGTRKKAKKMKSGFYHIAAKANIPIVMFSFDYDRKTIHCLGYLTPSGNYDEDLAK IFERYEGKISPKNRNWLAEPLQNLVKKT >gi|333032562|gb|GL891864.1| GENE 31 30519 - 31766 952 415 aa, chain + ## HITS:1 COG:all4025 KEGG:ns NR:ns ## COG: all4025 COG0477 # Protein_GI_number: 17231517 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 9 404 6 388 396 190 33.0 5e-48 MFRQQNLYLLLFSLYWAQGLPVGFMTHALPVILRAQGVSLAHIGGFGLLMLPWSIKIFWA PWVDRHAISHLGHYRSWILPAQFLTVGVLCILSFFPIQVLDQPLYLFIFFITLLFMNLTG ATQDIATDALAVNLLQHDQQHWGNTFQVVGSRLGFIVGGGAVLWCLDWLSWQPTFLLLAA LVFINTLPILLFKEPSHTSHSPHQYSQPRLVTKIKAYLGYFSQNKELRSWLIVLITFKVA DGLAGPLLKPLMVDMGLSFTQIGIYITMLGAVAALLGALIAGWMLKHISRSTALMTFSIL KIMSLGSYAYLAYAYEQKIKINAWLIYAVNALEDAFAAMLLVVMLTLVMHYSRKNYAGTD FTFQVSVMATVSGGLYSFSGVIADALGYFHYLIAIVSIAVLFLIPIYLWKAAKTV >gi|333032562|gb|GL891864.1| GENE 32 32312 - 33616 1663 434 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03005 NR:ns ## KEGG: ACICU_03005 # Name: not_defined # Def: putative DcaP-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 434 1 434 434 778 100.0 0 MDLFLNRKSFVVKSLAITVTALMMSGANAATSDKEEIRKLRQEVEALKALVQEQRQVQQQ QQQVQQQQQVQLAEVKAQPQPVAAPVSPLAGFKSKAGADVNLYGFVRGDANYIIEGADND FGDVSKSDGKTHDKLRATAKTTRLGLDFNTPVGDDKVGGKIEVDFAGSTTDSNGSLRIRH AYLTYNNWLFGQTTSNFLANHAPEMIDFSTNIGGGTKRVPQVRYNYKLGPTTQLFVSAEK GDSTTSVTGDSIKYSLPALTAKITQGYAEGRGSASARVLVENYKSQLADDDKTGWGVAVG TDFKVSDPLKLFADASYVVGDNSYLYGSNSPYAVDGNSIEQNEFVAVQVGGTYKILPNLR STLAYGAQFSDDGTDYARLNASANEKVQQAWINFIYTPVKPIDLGVEYVNGKRDTFDGKS YKDNRVGLMAKYSF >gi|333032562|gb|GL891864.1| GENE 33 33848 - 34714 410 288 aa, chain + ## HITS:1 COG:STM4293 KEGG:ns NR:ns ## COG: STM4293 COG2194 # Protein_GI_number: 16767543 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 4 285 18 298 547 168 35.0 1e-41 MFNLIIAIWLGAILNIGFYHQVHTLTPYFGVKAILFLAATLIILVATYYAVLQILNWKWT AKIFAILLIFIGGFSSYFVNTLGVIISPDQIQNMVQTDVSEFTDLISLRFVLWTVFFVIL PIFLITQVKFKQEKASRLLLKKVFSLVASLAVVGVLLFTYYVDFAAIFREHRDLKGMISP QNSISSLMSYYHKKAPKKNLPLVIYGQDAHQVQQVQKNLPKLMILVVGETARAESFSLNG YAKNTNPELSKQDIFNFSQVSSCGTSTAVSVPCMFSGMPPPRRKYSHW >gi|333032562|gb|GL891864.1| GENE 34 34663 - 35359 384 232 aa, chain + ## HITS:1 COG:STM4293 KEGG:ns NR:ns ## COG: STM4293 COG2194 # Protein_GI_number: 16767543 # Func_class: R General function prediction only # Function: Predicted membrane-associated, metal-dependent hydrolase # Organism: Salmonella typhimurium LT2 # 12 229 157 374 547 208 47.0 7e-54 MYVLGYAPPPKKVFSLVASFAVVGVLLFTYYVDFAAIFREHRDLKGMISPQNSISSLMSY YHKKAPKKNLPLVIYGQDAHQVQQVQKNLPKLMILVVGETARAESFSLNGYAKNTNPELS KQDIFNFSQVSSCGTATAVSVPCMFSGMPRVDYDEQLASHREGLLDIAKRAGYQVTWIDN NSGCKGACDRVEQYQIPENLKKKWCKDGECYDDILIDSLKQYLATIAKDDDR Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:57:38 2011 Seq name: gi|333032561|gb|GL891865.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld98, whole genome shotgun sequence Length of sequence - 30963 bp Number of predicted genes - 33, with homology - 32 Number of transcription units - 23, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 30 - 89 6.2 1 1 Tu 1 . + CDS 135 - 1025 1101 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + Term 1041 - 1103 17.3 - Term 1038 - 1081 10.3 2 2 Tu 1 1/0.429 - CDS 1093 - 3282 2086 ## COG0659 Sulfate permease and related transporters (MFS superfamily) - Prom 3316 - 3375 5.5 - Term 3525 - 3568 10.3 3 3 Tu 1 . - CDS 3585 - 5933 3061 ## COG2183 Transcriptional accessory protein - Prom 6117 - 6176 10.2 4 4 Op 1 40/0.000 + CDS 6589 - 7353 1201 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 5 4 Op 2 . + CDS 7371 - 8828 1388 ## COG0642 Signal transduction histidine kinase + Prom 8935 - 8994 5.8 6 5 Tu 1 . + CDS 9020 - 10534 1657 ## COG0427 Acetyl-CoA hydrolase + Term 10553 - 10582 1.2 + Prom 10565 - 10624 10.1 7 6 Tu 1 . + CDS 10665 - 11096 290 ## COG0456 Acetyltransferases + Term 11155 - 11208 6.2 + Prom 11121 - 11180 3.9 8 7 Tu 1 . + CDS 11250 - 11378 70 ## - TRNA 11268 - 11343 86.2 # Phe GAA 0 0 - TRNA 11470 - 11545 86.2 # Phe GAA 0 0 - Term 11422 - 11453 3.1 9 8 Tu 1 . - CDS 11651 - 12034 505 ## ABBFA_000280 acetyltransferase (GNAT) family protein - Prom 12237 - 12296 2.7 + Prom 12049 - 12108 4.2 10 9 Op 1 18/0.000 + CDS 12137 - 12730 713 ## COG0131 Imidazoleglycerol-phosphate dehydratase 11 9 Op 2 . + CDS 12730 - 13347 646 ## COG0118 Glutamine amidotransferase + Term 13367 - 13405 4.5 + Prom 13357 - 13416 9.6 12 10 Op 1 . + CDS 13501 - 14049 772 ## ABAYE0252 hypothetical protein + Term 14066 - 14101 5.3 + Prom 14051 - 14110 2.8 13 10 Op 2 . + CDS 14136 - 14777 576 ## ABBFA_000276 3'-5' exonuclease family protein + Prom 14779 - 14838 4.6 14 10 Op 3 . + CDS 14872 - 15603 1109 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase + Term 15616 - 15657 9.2 - Term 15611 - 15638 0.1 15 11 Tu 1 . - CDS 15672 - 16223 652 ## COG1396 Predicted transcriptional regulators + Prom 16176 - 16235 4.3 16 12 Tu 1 . + CDS 16322 - 17224 774 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 17229 - 17257 -0.1 - Term 17217 - 17245 -0.1 17 13 Op 1 . - CDS 17250 - 17561 264 ## COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 18 13 Op 2 . - CDS 17568 - 17957 593 ## COG3671 Predicted membrane protein 19 13 Op 3 . - CDS 17994 - 18623 565 ## COG3326 Predicted membrane protein 20 13 Op 4 . - CDS 18636 - 19586 861 ## COG2334 Putative homoserine kinase type II (protein kinase fold) - Prom 19614 - 19673 3.3 + Prom 19461 - 19520 2.9 21 14 Tu 1 . + CDS 19699 - 20457 1217 ## COG0107 Imidazoleglycerol-phosphate synthase + Term 20470 - 20506 7.5 - Term 20463 - 20489 1.0 22 15 Tu 1 . - CDS 20499 - 21137 648 ## ACICU_03441 hypothetical protein - Prom 21157 - 21216 4.9 + Prom 21133 - 21192 8.6 23 16 Tu 1 1/0.429 + CDS 21247 - 22251 921 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 22297 - 22356 5.6 24 17 Tu 1 . + CDS 22384 - 23073 997 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Term 23147 - 23201 6.8 25 18 Op 1 . - CDS 23252 - 23494 262 ## ACICU_03444 hypothetical protein 26 18 Op 2 . - CDS 23540 - 24139 425 ## COG1280 Putative threonine efflux protein - Term 24152 - 24196 9.4 27 18 Op 3 . - CDS 24236 - 25315 981 ## COG1864 DNA/RNA endonuclease G, NUC1 - Prom 25360 - 25419 6.9 + Prom 25346 - 25405 3.6 28 19 Tu 1 . + CDS 25571 - 26014 588 ## ABAYE0235 signal peptide + Term 26032 - 26061 1.4 - Term 26004 - 26060 5.3 29 20 Tu 1 . - CDS 26070 - 27947 1815 ## COG3158 K+ transporter - Prom 28098 - 28157 80.3 + TRNA 28066 - 28155 64.7 # Ser GGA 0 0 - Term 28148 - 28198 9.4 30 21 Op 1 . - CDS 28224 - 28682 228 ## ABSDF3353 hypothetical protein 31 21 Op 2 . - CDS 28676 - 29632 607 ## ABSDF3356 hypothetical protein - Prom 29661 - 29720 7.7 - Term 29755 - 29791 1.1 32 22 Tu 1 . - CDS 29807 - 30364 559 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 30393 - 30452 6.1 + Prom 30388 - 30447 4.8 33 23 Tu 1 . + CDS 30481 - 30816 280 ## COG1733 Predicted transcriptional regulators Predicted protein(s) >gi|333032561|gb|GL891865.1| GENE 1 135 - 1025 1101 296 aa, chain + ## HITS:1 COG:Rv1543 KEGG:ns NR:ns ## COG: Rv1543 COG1028 # Protein_GI_number: 15608681 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mycobacterium tuberculosis H37Rv # 9 296 47 341 341 253 46.0 3e-67 MNKKLEALFQEKVQGKVILVTGASSGIGLTISNKLADAGAHVLLVARTQETLEEVKADIE SRGGQASIFPCDLNDMEMIDQVSKEILASVDHIDILINNAGRSIRRAVHESYDRFHDFER TMQLNYFGAVRLVLNILPHMIQRKDGQIINISSIGVLANATRFSAYVASKAALDAFSRCL SAEVHAHKIAITSIYMPLVRTPMIAPTKIYKYVPTLSPEQAADLIAYAIVKRPKRIATNL GRLASMTYSVAPGINNMFMSIGFRLFPSSDAAKGKKAEKLNWVQKAYARIFPGEHW >gi|333032561|gb|GL891865.1| GENE 2 1093 - 3282 2086 729 aa, chain - ## HITS:1 COG:RSp0113 KEGG:ns NR:ns ## COG: RSp0113 COG0659 # Protein_GI_number: 17548334 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Ralstonia solanacearum # 10 481 9 480 520 331 40.0 3e-90 MPALELKNRFHVNDLLSGVVVFLVALPLCLGIALASGAPIISGIIAGIVGGIIVGLLSGS HISVSGPAAGLTAVILVQLDQLGGNYAAFLLCIVFAGILQILFGVFKLGFFANFIPNNVI LGLLAAIGAILIVTQLPYLFGLTDFSWKEVWTATPDTFIQKFDAGAALIGLLSLFLILAW DSSPLKKLALPSALIAVVLAAVFNFVLISIGSSWAVQSNNLIQLPNILQAPEEVLVFPDF SYLAEPLIYTGAITLAIVASLETLLNLEAADKLDPQKRSSPPNRELWAQGAGNIVSGLIG GMPVTSVIVRSSVNANTGARSKCSTIIHGVLLLLAILFFVPLMNMIPLSALAAILIVTGF KLTHPKLFKQLYQKGWRQFLPFIITLVAILLTDLLTGILVGLFTSSAFILYGNFNKGVRV YKEKHLHGIVTRIELPSQVTFLNRSALISALEHVHKDQQLIIDATQCDSIDPDIYQVIQD YQNETAVKRQVDLKLIGFKQHYEEVDDAVLDIYISTRDLQRKLSPQQVITLLKEGNERFV KNERLQRDIYRQIRVTADEGQHPIAAVLGCMDSRAPTEMIFDVGIGDLFSLRIAGNIAGQ KVLGSLEFACQAKGSKVILVLGHTDCGAVTSACQLRLQQKQISDVKEMPHIQYVLGPLMH SVESVYDIMQPRELNKTFVNQVTAMNVHYNIQYIINNSTVLKDLLDRGEIAIVGAIYDVK TGHVEFLDA >gi|333032561|gb|GL891865.1| GENE 3 3585 - 5933 3061 782 aa, chain - ## HITS:1 COG:RSc1623 KEGG:ns NR:ns ## COG: RSc1623 COG2183 # Protein_GI_number: 17546342 # Func_class: K Transcription # Function: Transcriptional accessory protein # Organism: Ralstonia solanacearum # 1 745 6 766 779 728 51.0 0 MTDLVQQLASELAVRPNQVEAAIRLIDEGASVPFIARYRKEVTQGLDDTQLRQLDTRLAY LRDLYERREKVIQSLQEQNKLNDDLLARVNAAETKNALEEIYAPYRPKRTSKSFKAKEAG LGPIAEKIISEQIDPTEALAGFSHEDYPDVESQLDAIQHILIDDWAQNIPLTTELKATFA KTAVLKSTVASEEKKEVGKKFRDYFEFSEGLNKLPSHRLLAMLRGRQENVLGLKVDGEDD APLARIETEYNLDQVQPQTRQDFLKQTAKLFWLGKVRPQIEHSLLTEKRLAAEAEAMQVF AENLRHLLLSAPAGSRTTLGVDPGIRTGVKLAVVSEAGDVLAHSTIYPFAPKEDKEGSIA ELARLCREYNVELIAIGNGTASRETEAVVAEMMAANTDLKLTRVTVSEAGASVYSASELA AAELPELDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVNQTGLAKTLDAVVED CVNAVGVDVNTASPAILAYIAGLNKAIAQQIVEYRKEHGRFDTRQALKNVPRLGERTFEQ AAGFLRIQNGSEPLDASAVHPESYGLVEKIVAAKATTVKDIIGNTEIIRQVKAEEFVDDK FGLPTIQDVLAELEKPGRDPRPEFRTAKFREDITEVAQLTEGMQLEGVVTNVTNFGAFVD IGVHQDGLVHISELANEFVSDPHKVVKPGQIVQVRVMQVDVERNRVNLSMRAEGAAPVKA QRPPRREQNNEQRSERKPQGKRPQPRKDQVERPQRSKQEKPQEQKIGGFGALLLQAGIKG SK >gi|333032561|gb|GL891865.1| GENE 4 6589 - 7353 1201 254 aa, chain + ## HITS:1 COG:ECs4247 KEGG:ns NR:ns ## COG: ECs4247 COG0745 # Protein_GI_number: 15833501 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Escherichia coli O157:H7 # 22 254 6 238 239 318 69.0 7e-87 MSLVVPAEHPETVHNETDRVERILVVDDDVRLRTLLQRFLEDKGFVVKTAHDASQMDRLL QRELFSLIVLDFMLPVEDGLSICRRLRQSNIDTPIIMLTARGSDSDRIAGLEAGADDYLP KPFNPNELLARIRAVLRRQVREVPGAPSQQVEVVSFGPWSLDLSTRTLTREGQIVTLTTG EFAVLKALVQHPREPLTRDKLMNLARGREWGAMERSIDVQVSRLRRLIEDNPARARYIQT VWGVGYVFVPDGAE >gi|333032561|gb|GL891865.1| GENE 5 7371 - 8828 1388 485 aa, chain + ## HITS:1 COG:PA5199 KEGG:ns NR:ns ## COG: PA5199 COG0642 # Protein_GI_number: 15600392 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 34 453 8 423 439 246 33.0 6e-65 MSLEPIPPQTFTDYVAYSERKRTRWERFLDKIKPRSAAMRTTILVLLVVLFSLFMSLWFF WRTLYLPEIQQHARYLAVELELVNNPNIRIFHRDSEVDVDTWLRNRVGIEYVTNPKEYPS VRDKIIAEFFTNQVEQKLANEIGAKDVTVYFQFKPSPRIWIQTPEMHGNWVREPLKTYAN YSPELLVGWVVGVPLVSAIIILILVRQMNRPLRRLQNAANEYSKSGTAPYLDTNHGPLEI RQVNQAFNRMVYTLEQTERERRIMLAGISHDLRTPLTRIRLTAEMLPDEFLREGLVYDVD DMDAILNQFISYMRDGSDEELKDTNINILLQELVVQFKPLDIRFNMQDVPIIPARSLSLK RLIANLINNAKRYGAEPIELSAKVENEHILITVADHGEGIPEDQIEELMQPFVRGNSART IQGSGLGLAIVKRIVDIHQGEIQIHNREQGGLEVIISLPIPKPAPEENTTHNPLEKIKQT LSERF >gi|333032561|gb|GL891865.1| GENE 6 9020 - 10534 1657 504 aa, chain + ## HITS:1 COG:PA5445 KEGG:ns NR:ns ## COG: PA5445 COG0427 # Protein_GI_number: 15600638 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Pseudomonas aeruginosa # 1 495 1 495 497 785 79.0 0 MSLSRIRLASLHDKVISAEQAAQFIENGMTVGMSGFTRAGEAKAVPQALVELAKKNPLKI TLITGASLGNDLDKQLTEAGVLSRRMPFQVDNTLRRAINNGEVMFIDQHLSETVEQMRNQ QLKRPDVAVIEAIAITEDGGIIPTTSVGNSASFAIFAEKVIVEINTSLSESFEGLHDIYI PTYRPTRTPIPLTKVDERIGTTAIQIDPSKIVGIVFNDTHDSPSTVTPPDDETQGIANHL IAFFEKEVAEGRLPKNLGPLQAGIGSIANAVLTGLKDSNFEDLIMYSEVLQDCTFELIDA GKMKFASGSSITLSAKCGEKVFGNIEAYKDKLVLRPQEISNHPELVRRLGIIGINTALEF DIYGNVNSTHVCGTKMMNGIGGSGDFARNAHLAIFVTKSIAKGGDISSIVPMVSHVDHSE HDVDILVTEQGLADLRGLAPRERARAIIDNCVHPLYRDALNDYFDRACAKGGHTPHLLRE ALSWHANFEETGQMLQPTPVAKSA >gi|333032561|gb|GL891865.1| GENE 7 10665 - 11096 290 143 aa, chain + ## HITS:1 COG:STM2449 KEGG:ns NR:ns ## COG: STM2449 COG0456 # Protein_GI_number: 16765769 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Salmonella typhimurium LT2 # 4 142 40 178 178 166 55.0 1e-41 MFIIRQFTNADLDDVVNLWESCGLTRPWNNPETDIFRKVSQQDDLFLVAIKDEQLIGTLM GGYDGHRGWINYLAVHPHQQRLGIATALVQQLEKRLMARGCPKLQLLVRKDNLNVLNFYE QLGYDEVEAVCLGKRLISDNSHD >gi|333032561|gb|GL891865.1| GENE 8 11250 - 11378 70 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLFRIWWRDPGSNWGHTDFQSVALPTELSRRWPVLSRISEQ >gi|333032561|gb|GL891865.1| GENE 9 11651 - 12034 505 127 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000280 NR:ns ## KEGG: ABBFA_000280 # Name: not_defined # Def: acetyltransferase (GNAT) family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 127 1 127 127 258 100.0 6e-68 MPITVHAYSSLDNSEIRDQLERLYDTSPEFGDGHDAIEQLEQDLQQYTTLYTAEFNTKII GAIWCSGQGESKVLEYIVVHPANRGRGVAERLVEEACRIEEAKGVKIFEPGCGAIHRCLA HIGKLHS >gi|333032561|gb|GL891865.1| GENE 10 12137 - 12730 713 197 aa, chain + ## HITS:1 COG:RSc2950 KEGG:ns NR:ns ## COG: RSc2950 COG0131 # Protein_GI_number: 17547669 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Ralstonia solanacearum # 4 197 3 196 196 288 73.0 5e-78 MTQRISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKRHGLFDIDIHCDGD LEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMD IPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKALARALRMAC EIDPRAENTIASTKGSL >gi|333032561|gb|GL891865.1| GENE 11 12730 - 13347 646 205 aa, chain + ## HITS:1 COG:PA5142 KEGG:ns NR:ns ## COG: PA5142 COG0118 # Protein_GI_number: 15600335 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Pseudomonas aeruginosa # 1 204 2 210 213 238 56.0 6e-63 MTRIALLDYGMGNLHSAAKALEYVGATVDVTNDPKLIAQADKIVFPGVGAMRDCMQGMRE AGIDEVVRKAAFNKPVLAICVGMQALLQSSEENGGVDALGIFDGVVKHFPQMEGLKVPHM GWNQVHQMDPSHPMWNNIEQDARFYFVHSYYVEPKDENLVAATCEYGVNFCTAIHKDNLF ATQFHPEKSHTAGLQLLKNFVEWNI >gi|333032561|gb|GL891865.1| GENE 12 13501 - 14049 772 182 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0252 NR:ns ## KEGG: ABAYE0252 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 182 7 188 188 350 99.0 2e-95 MNSPFENQPISQDSPFKANGRFGRLSYAAWTFLFTLVLVTAILLIMFTFGFTNPEGAPDF STPGLICIAILYIVGIYINFVFTIRRLHDRNNTGWLSLLMLVPVVNIGLAIYLFCAKGTE GPNDYGPKRPTPSWERVLGWIYIVLIPLALIFGVIAVIMAPTYEGYVEKSESIVIGSPSQ SE >gi|333032561|gb|GL891865.1| GENE 13 14136 - 14777 576 213 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000276 NR:ns ## KEGG: ABBFA_000276 # Name: not_defined # Def: 3'-5' exonuclease family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 213 1 213 213 377 100.0 1e-103 MSEASALLDKTSIQQLPPFENLNHQNIVVIENGEQCKTIEEELKAATFLGFDSESKPTFQ VGEVSTGPHLIQLATEHKAYLFHVNLSTLKFLQPILSNPKQIKVGFGLKNDKHIFHKKGI ELESCVDLAKGFSHFGFKQQMGVQKAVALLLGQYLAKSKKVGTSNWARKPLTSQQISYAA ADAYAALLVFLELKKRKVLPIHISEKIQTALQR >gi|333032561|gb|GL891865.1| GENE 14 14872 - 15603 1109 243 aa, chain + ## HITS:1 COG:PA5141 KEGG:ns NR:ns ## COG: PA5141 COG0106 # Protein_GI_number: 15600334 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Pseudomonas aeruginosa # 1 239 1 241 245 322 68.0 6e-88 MLIIPAIDLKDGKCVRLKQGRMEDDTVFSDDPVATAQHWVNEGARRLHLVDLNGAFAGTP IHKPVVEAIAKAQPELPIQIGGGIRSLETIEHYLEAGVTFVIIGTKAVQEPEFVEEACKR FAGHIIVGIDAMNGMVATDGWANVTDVKATDLAKRFADAGVSSIVYTDIARDGMMQGVNV EQTVNLAQYSGLPVIASGGVTNLDDVRNLKGQPGILGAITGRAIYEGTLNLREAQLLLDE NRL >gi|333032561|gb|GL891865.1| GENE 15 15672 - 16223 652 183 aa, chain - ## HITS:1 COG:PA1359 KEGG:ns NR:ns ## COG: PA1359 COG1396 # Protein_GI_number: 15596556 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 2 182 36 217 218 165 48.0 6e-41 MSQSSSVLQHVGTNIRSLRDERSLSQQDLADRAGVSRRTIAALETGQVNISLAKLDAIAA VLGVDFRTIVSAPELKEHALVNALAWQGEKEESKATFLASVPSRSQVELWTWSLAVGESY VAEADAEGWQELIYVLEGELTIQFTDSSKTIAAGSSFIFASSVTYTYINSGSQVLKFIRN VVY >gi|333032561|gb|GL891865.1| GENE 16 16322 - 17224 774 300 aa, chain + ## HITS:1 COG:AGc3999 KEGG:ns NR:ns ## COG: AGc3999 COG0697 # Protein_GI_number: 15889477 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 22 300 16 298 300 101 29.0 2e-21 MSPTYLSSSKVPQLALILITVIWGGTFLTVQYALNFSSPMFFVGCRFAVAALTLLLISLK SMKGVTLKDLGAGSVIGLVIAAGYGTQTIGLQTIPSSESAFLTALYVPLVPILMWLIFRK TPHIMTWVGAALAFTGLVLLTGNGFKQISLSFGQLLTVLGAFAIALEIIFISYFAGKVNL RRVTIIQLGVASLLSFTIMPIVGEHTIPAFSWPLILIAVALGLASALIQFVMNWAQRVVD PSRAAIIYAGEPVWAGIIGRIAGERLPVIALFGGALVVLGVLVSELKIKLPIKKNKRVRE >gi|333032561|gb|GL891865.1| GENE 17 17250 - 17561 264 103 aa, chain - ## HITS:1 COG:BS_yczJ KEGG:ns NR:ns ## COG: BS_yczJ COG2329 # Protein_GI_number: 16077480 # Func_class: R General function prediction only # Function: Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides # Organism: Bacillus subtilis # 1 93 1 93 95 83 47.0 7e-17 MIIEHVHLKIKSGQSEAFLKAFEQAKHIVSLMEGFNAVQLIKHTTDPHHYILMIFWDEIE NHTEGFRKSEAYQEWKKLLHPFYDPMPTVEYYEPSILLKKSDI >gi|333032561|gb|GL891865.1| GENE 18 17568 - 17957 593 129 aa, chain - ## HITS:1 COG:RSc2943 KEGG:ns NR:ns ## COG: RSc2943 COG3671 # Protein_GI_number: 17547662 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 11 129 21 121 124 87 42.0 7e-18 MNSSIDQDPNRTLTLILYVLYIVAIFTGGLLAIIALIINYVKRSDVQGSIFASHFTWQIR TFWWYLAWNIIAFLPFIFLFFTGENTDLFAGVAISSTVFCVGVIAAAWIWIVYRAIRGLI ALNDNRPMY >gi|333032561|gb|GL891865.1| GENE 19 17994 - 18623 565 209 aa, chain - ## HITS:1 COG:STM1632 KEGG:ns NR:ns ## COG: STM1632 COG3326 # Protein_GI_number: 16764976 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 121 197 27 103 114 67 42.0 1e-11 MRDQGRLVEWFDEKGYGFIQPDDAEKERVFLHIKDFARPGPRPIIGCALEYLVILDERGR FRAQQVTYLKASQTRKALKPTKTQSSFQTSPWSAMQMGIVFYFVLMGIMSFIHILPAYTL LFVLMMNVLSYWLYSQDKEAAQLGNRRVPEQTLHIVSFLGGWPAAWWAQQKLRHKTQKQP FRKIYFCTIFFHLLLILWLISPLNVLRGS >gi|333032561|gb|GL891865.1| GENE 20 18636 - 19586 861 316 aa, chain - ## HITS:1 COG:NMB2029 KEGG:ns NR:ns ## COG: NMB2029 COG2334 # Protein_GI_number: 15678023 # Func_class: R General function prediction only # Function: Putative homoserine kinase type II (protein kinase fold) # Organism: Neisseria meningitidis MC58 # 1 307 1 301 305 157 33.0 3e-38 MSVYTPLSLDEVRTFAAPYGLEVLELNPIQGGIQNTNYFLVDVNRKQYVLTVFEELDAQG AGELIPVLEQLGTHDVPVAVPLKHSGQAVHFIAGKPAQIAPRLMGHHPMQTTVAQVAAIA DAQAKLHVALQDFPLEREYRRDHQYWTGVAEQLKPNMTQDDQTLLEQVYQAFNAKTAQYS NRPTGFIHSDLFRDNTLFEGEQLQGILDFYELNQDELLFDIAITINDFCTEYPAAHLNSD KVDAYLEAYQKVRALTSDELECLDVFLAMAACRFWSMRLQVAQKNKEEGRTGDDILQKDP QEMRAMMQDRLSHVKS >gi|333032561|gb|GL891865.1| GENE 21 19699 - 20457 1217 252 aa, chain + ## HITS:1 COG:PA5140 KEGG:ns NR:ns ## COG: PA5140 COG0107 # Protein_GI_number: 15600333 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Pseudomonas aeruginosa # 2 251 3 256 256 374 75.0 1e-104 MLAKRIIPCLDVDNGRVVKGVQFLDIRDAGDPVEVARRYNEQGADEITFLDITATHHGRD TTYRTVERMAETVFVPLTVGGGVRKVEDIRALLNAGADKVSINSAAVFNPEFVQEASQHF GAQCIVVAIDAKKTGDNKWEIFTHGGRKPTGIDAIEWAVKMADYGAGELLITSMDADGTK AGYDIALMRAINDRVTIPTIASGGVGNLQHLADGILQGGADAVLAASIFHFGQYTIPEAK QYLAEQGIEMRL >gi|333032561|gb|GL891865.1| GENE 22 20499 - 21137 648 212 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03441 NR:ns ## KEGG: ACICU_03441 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 212 1 212 212 415 99.0 1e-115 MLKGFIAGIAVANAFEWVAHKYILHGVHRAGQPRYSPVPKSMESHWAHHREVRKQQFHDD CYVEGVGNWRTKNELISLAVVATVSSAIFYPFSKGMALAAWYSAGNYYYIHRRAHLEPDW AKRKIPWHYDHHMNSNQDANWCVTKPWFDYVMGTRVVSSADLKEQNPLGIRLPTALARPL SQAVEKIFPAKWVEKKAQPKLVSDVNAIEGAA >gi|333032561|gb|GL891865.1| GENE 23 21247 - 22251 921 334 aa, chain + ## HITS:1 COG:PA3027 KEGG:ns NR:ns ## COG: PA3027 COG2207 # Protein_GI_number: 15598223 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 62 329 66 336 343 146 33.0 7e-35 MPQLKNYTGSVYGGLGHLLKAYCEANELTIPEQLEQIQNLERFDYVVWRDLLEVIYKLDP KPGLGLEIAKYVQPKHLGIIAYLALSCDNLGEALIRYHDFHRLIYDGSPLVVELQGRYGS IRWEATELHPTQLTDEIAIALVIQFLRLFMSHEDVQLYEVRFLNAAPKNIRVYEQYFQCP VRFSQPRTELFIPITEIHKPLSSADHTLQQLLVQQAQALLEQLPNSTQLDQRLQHSILTG LQKNQYQIEYIAAQLGLSVRQLQRHLQQQNTTFQERVQQVRFMLATEYLKDPHLSLQEIA LLLCYSEQSAFQRAFKHWTKQTPQQWRDQFLNKE >gi|333032561|gb|GL891865.1| GENE 24 22384 - 23073 997 229 aa, chain + ## HITS:1 COG:PA4034 KEGG:ns NR:ns ## COG: PA4034 COG0580 # Protein_GI_number: 15599229 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Pseudomonas aeruginosa # 1 229 1 229 229 261 68.0 8e-70 MNKYFAEFLGTFWLVFGGCGSAVLAAAFPELGIGFAGVALAFGLTVLTGAYALGHISGGH FNPAVSVGLWVGGRFDVKDLIPYIVAQVVGATAAAFVLYIIAQGQAGFSGVGGFATNGFG DLSPNKFGLGSAFIIEVVLTAFFLIIILGATDRRAPAGFAPIAIGLGLTLIHLISIPVTN TSVNPARSTGVAFFAETAALSQLWLFWVAPILGAVIGAIIYKVVAGDKD >gi|333032561|gb|GL891865.1| GENE 25 23252 - 23494 262 80 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03444 NR:ns ## KEGG: ACICU_03444 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 80 1 80 80 130 97.0 1e-29 MFKPFEKGTESSSIEDLTLENDVECVSIYGNLQITKDKVGLEQAKALQSFLNDIIAALEK EELPEKIERPAEQEINNPFL >gi|333032561|gb|GL891865.1| GENE 26 23540 - 24139 425 199 aa, chain - ## HITS:1 COG:VC1712 KEGG:ns NR:ns ## COG: VC1712 COG1280 # Protein_GI_number: 15641716 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 1 195 15 204 204 89 25.0 4e-18 MFASMFLFSFAMSITPGPVNTVILSTSLNHGLKRSLPYISGATIGFTLLLIFMAFGLQSV LTQFPVVLKILAVCGTLFVCYIGIKIILSAANISISSAPVEHMLIPNFKDGFLLQWLNPK AWLACVSGITMFTSIENPQSLPIFIIIYFFTCYACLFFWGLCGDKFSVVLNQGNRLKYFN ILMGAFLILSALLILIDFF >gi|333032561|gb|GL891865.1| GENE 27 24236 - 25315 981 359 aa, chain - ## HITS:1 COG:RSc0744 KEGG:ns NR:ns ## COG: RSc0744 COG1864 # Protein_GI_number: 17545463 # Func_class: F Nucleotide transport and metabolism # Function: DNA/RNA endonuclease G, NUC1 # Organism: Ralstonia solanacearum # 61 263 66 269 275 166 43.0 1e-40 MASKKRSKGTNSFSLSEHFGKIILACIAAGSFAIAFGSEKISQWFSPLSTNSTCLNQFYR EVPPALNKESLKKDSYPLCFNGFNVLYSGISKTPLWSAEHLDAERLSVKIKREDNFHEET RVPQKHRALLSDYRGSGYDRGHMAPNGDMPNKESQSDSFSLSNMVPQAPKNNQEVWRKLE EATRAIVTKQKQDVYVVTGPVFEGKRLKTIGQGVIVPTAVYKAVYMPKTGAIGAYYAPNN NSQQVKVVSVCYIEEKLGINLFPQLTEQQKRNVYRLPLTASQVKPNQKLDYLHWDGESQC EQDLSAEQIQALQDQFKKQKTGSSEPMEAKVPSIDEETRNAIVKQLVEALVNYFLQIMK >gi|333032561|gb|GL891865.1| GENE 28 25571 - 26014 588 147 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0235 NR:ns ## KEGG: ABAYE0235 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 147 17 163 163 134 98.0 9e-31 MIHSKIIGIGVITGLCSMAALAEPAVQPGDTLESLSKVKVTTTVNGQPGSISDLVNSGQV QQVSAAPTSAAPTGAPIPADVPPAPPAGGEMAPPAAPTDAVPPAPNQAAPAPQDPNTPPP AANPNQSADPMVKDGALPADAPMPQAQ >gi|333032561|gb|GL891865.1| GENE 29 26070 - 27947 1815 625 aa, chain - ## HITS:1 COG:XF1903 KEGG:ns NR:ns ## COG: XF1903 COG3158 # Protein_GI_number: 15838501 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Xylella fastidiosa 9a5c # 15 625 23 634 634 594 50.0 1e-169 MQNTAKKATLPATALAALGVVFGDIGTSPLYALKESFHAAHGLGIQPENVLGILSIIFWC LMLIISIKYVAIVMRADNNGEGGIMALLALNLRKAKIADNKKIYMIAIGFIGASLFFGDG IITPAISVLSAVEGLSIATDVFDPFIMPIAIAIIVTLFLVQKHGTAFVGKFFGPITLVWF LSLGILGIHSVIQTPVVLGMFSPHWAIQFIYHHPIMTFFVMGAVVLTVTGGEALYADMGH FGPVPIRLAWFFVVLPCLVLNYAGQGALLLRDPAAIENPFYLLVPQWALYPMIIMATMAT VIASQAVISGVFSLARQAIQLGYLPRLSIKHTSESEEGQIYVPFLNWLLLIAIIILILIF KTSSNLASAYGLAVTLTMLCDTILVAVFIYSAWKWSLPKVLLLIIPFFILESVLVGATSL KILSGGWVPLLIGAIAVTILMTWKRGRELTFAKLEHDTLSLDLFVKSIGNSVHWVPGDAV FMTGTPNVVPHAMLHNIKHNKVLHQRNILVTVVIEDVPFVAPEERITTETLAEHFFRIKI FYGFKDEMNVPKALMQAYEQLGLEYDLMHISFFISRDRIVHSVGDGMSPWREKLFISMQR NTSPVSDFYQIPTNRVVELGSQIEI >gi|333032561|gb|GL891865.1| GENE 30 28224 - 28682 228 152 aa, chain - ## HITS:1 COG:no KEGG:ABSDF3353 NR:ns ## KEGG: ABSDF3353 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 85 152 1 68 70 134 97.0 2e-30 MLKPRIFITIGLLLAGLTLFAVLEAYEKKTNVEKEQASRVAIFFFNSLSNGDSATAYKYV WSGENLNIRNAEIPQIYKDSKVLEVLKVRYDSAKNRPDYYQQFYKMISLTIKIKTVHADL AGNPAGTYIVFVTVVKKDPKSNWLVTELGSGA >gi|333032561|gb|GL891865.1| GENE 31 28676 - 29632 607 318 aa, chain - ## HITS:1 COG:no KEGG:ABSDF3356 NR:ns ## KEGG: ABSDF3356 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 3 318 6 321 321 608 96.0 1e-172 MFSSDLTDYVIRQLGRTKNKRYEAYVVSRIIHLLNDFTLKFVTQQFVRLSNKKIALTDLY FPQLGIHIEVDEGHHFLRNSKMEYSLNQIDEPLYSISQTESDAMREEDIISITGHKIFRV NVYKNQEGQPQNLESIHQQIDKIIEEIKTAKNKLIEASTFKEWNIETEYNPQTYINLGRI SLADNVVLKTTKDVCNCFGYNYKNYQRGGAIHPYEEDTLIWFPRLYENKDWINTISPDGL TITEKSTDETITLKKLEEWKNGPQKRIVFARVKDNLNSRAMYRFMGLYKFQKADLKDGAV WKRVECEVQTYSPKETKC >gi|333032561|gb|GL891865.1| GENE 32 29807 - 30364 559 185 aa, chain - ## HITS:1 COG:FN1233 KEGG:ns NR:ns ## COG: FN1233 COG2249 # Protein_GI_number: 19704568 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Fusobacterium nucleatum # 3 172 6 179 180 183 50.0 2e-46 MKKTLVIVAHPHIDQSVINKRWVEELEKYPDQFTVHQIYQAYPDGVIDVAKEQALVEEHE NLVFQFPVYWFNCPPLLKQWLDEVLAYGWAYGSTGDKLKNKKFMLAVSAGAQEKVYSEQG EYKLSLEQIFSSFELTALYVGAVYQPLYAFYGLDTNPSPDDAIPTHQEIDNSAVQYVQKL LALSE >gi|333032561|gb|GL891865.1| GENE 33 30481 - 30816 280 111 aa, chain + ## HITS:1 COG:FN1232 KEGG:ns NR:ns ## COG: FN1232 COG1733 # Protein_GI_number: 19704567 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 4 108 6 111 113 150 69.0 7e-37 MTDCLPSNTPLEETGFGYTLSLINGKYKMIIMYWLYGKTVMRFNELQRCIGNISFRTLSN TLKELERDELIIRKEYPQIPPKVEYRLSERGQSLIPLLDMMCQWGERNMNS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:58:21 2011 Seq name: gi|333032560|gb|GL891866.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld99, whole genome shotgun sequence Length of sequence - 25153 bp Number of predicted genes - 24, with homology - 24 Number of transcription units - 15, operones - 5 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 92 - 151 5.4 1 1 Tu 1 . + CDS 207 - 800 522 ## ACICU_01221 hypothetical protein + Term 837 - 872 1.0 + Prom 970 - 1029 10.1 2 2 Tu 1 . + CDS 1185 - 1814 794 ## ACICU_01222 putative surface antigen + Term 1834 - 1865 2.5 - TRNA 2176 - 2251 90.4 # Gly GCC 0 0 - Term 2125 - 2164 6.1 3 3 Tu 1 . - CDS 2315 - 3736 1504 ## COG0215 Cysteinyl-tRNA synthetase - Prom 3765 - 3824 6.5 + Prom 3711 - 3770 4.1 4 4 Op 1 13/0.000 + CDS 3950 - 4927 1205 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 5 4 Op 2 . + CDS 4931 - 5470 663 ## COG1778 Low specificity phosphatase (HAD superfamily) 6 4 Op 3 . + CDS 5508 - 6056 487 ## ABBFA_002306 hypothetical protein 7 4 Op 4 19/0.000 + CDS 6040 - 6588 582 ## COG1934 Uncharacterized protein conserved in bacteria 8 4 Op 5 . + CDS 6588 - 7334 284 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 + Term 7354 - 7397 2.4 + Prom 7337 - 7396 13.0 9 5 Op 1 3/0.000 + CDS 7543 - 9075 1328 ## COG1538 Outer membrane protein 10 5 Op 2 13/0.000 + CDS 9072 - 11213 242 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 11 5 Op 3 . + CDS 11210 - 12400 1334 ## COG0845 Membrane-fusion protein + Term 12409 - 12437 3.0 + Prom 12412 - 12471 11.1 12 6 Op 1 . + CDS 12493 - 13092 552 ## COG1739 Uncharacterized conserved protein 13 6 Op 2 . + CDS 13085 - 13696 666 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 13701 - 13760 4.2 14 7 Tu 1 . + CDS 13852 - 14694 793 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins 15 8 Tu 1 . - CDS 14811 - 15479 744 ## COG4122 Predicted O-methyltransferase - Prom 15503 - 15562 5.5 - Term 15571 - 15610 1.3 16 9 Op 1 . - CDS 15619 - 16290 544 ## ABAYE2480 hypothetical protein - Prom 16390 - 16449 3.8 - Term 16432 - 16461 1.4 17 9 Op 2 . - CDS 16471 - 16794 383 ## COG1146 Ferredoxin - Prom 16951 - 17010 8.7 18 10 Op 1 . - CDS 17139 - 17714 427 ## COG3153 Predicted acetyltransferase 19 10 Op 2 . - CDS 17734 - 20379 2918 ## COG0249 Mismatch repair ATPase (MutS family) - Prom 20400 - 20459 5.8 + Prom 20272 - 20331 2.6 20 11 Tu 1 . + CDS 20360 - 20491 67 ## ACICU_01241 hypothetical protein 21 12 Tu 1 . - CDS 20654 - 21121 306 ## COG1522 Transcriptional regulators - Prom 21142 - 21201 3.8 22 13 Tu 1 . + CDS 21243 - 22100 684 ## COG5006 Predicted permease, DMT superfamily + Prom 22658 - 22717 4.4 23 14 Tu 1 . + CDS 22868 - 23956 701 ## COG2200 FOG: EAL domain + Prom 24005 - 24064 2.6 24 15 Tu 1 . + CDS 24087 - 25019 553 ## COG1560 Lauroyl/myristoyl acyltransferase Predicted protein(s) >gi|333032560|gb|GL891866.1| GENE 1 207 - 800 522 197 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01221 NR:ns ## KEGG: ACICU_01221 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 197 1 197 197 281 100.0 1e-74 MKAILTKKIISCIAISGVLSFSAFEIMAANQQTINDGKNHSKILNENHENLTDSQIFKIL STANNGEIKQAKTALPKLKMDEAKKYAEMMIKEHSANEKNAQALASRLQLISQTSNLSKS LQNDSDKIVSKLNQITSDTDKNYMMSQVKVHRKVLTIIDKQLIPNTKSSELKNMLVQTRD AVAKHLKAAEDIFKNMK >gi|333032560|gb|GL891866.1| GENE 2 1185 - 1814 794 209 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01222 NR:ns ## KEGG: ACICU_01222 # Name: not_defined # Def: putative surface antigen # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 209 1 209 209 275 100.0 1e-72 MVNTKQSNSVGNHTTQKEPSSNGNVSNSKPLQDISSTIDNARPDLNSRPTNNNHVPDMNE AGENLVATGAGTLGGAAVGAAFGVVGGPPGAVVGGIIGGVVGAIAGNDIAQTNNQKDDSN DWQEEDNYWRENYKKMPYYTEDKNLEYDRDYRAAYRLGYENRVDNNAEINFSEVESKLKT KWEQVKGSSRLQWEDAKFAVEDGLKKIHP >gi|333032560|gb|GL891866.1| GENE 3 2315 - 3736 1504 473 aa, chain - ## HITS:1 COG:PA1795 KEGG:ns NR:ns ## COG: PA1795 COG0215 # Protein_GI_number: 15596992 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 6 473 4 460 460 521 54.0 1e-147 MQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG WKVRYIRNITDIDDKIIKRANENGETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYI DQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKK HPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHE NEIAQSEASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSS HYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNAMCDDFNT AEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQDAL ALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWRRAD >gi|333032560|gb|GL891866.1| GENE 4 3950 - 4927 1205 325 aa, chain + ## HITS:1 COG:yrbH_1 KEGG:ns NR:ns ## COG: yrbH_1 COG0794 # Protein_GI_number: 16131087 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Escherichia coli K12 # 6 207 11 212 212 254 63.0 2e-67 MPNPTDFQSSALATLRIEQQAIDVLATQIDDRFNRACEILLQCKGRVVITGMGKSGHIGR KMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVP LITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFT ADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKRLGLTTIVDE QDHLLGIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQ FVVVDDQNKVIGVISMHDLIQAGVN >gi|333032560|gb|GL891866.1| GENE 5 4931 - 5470 663 179 aa, chain + ## HITS:1 COG:VC2524 KEGG:ns NR:ns ## COG: VC2524 COG1778 # Protein_GI_number: 15642520 # Func_class: R General function prediction only # Function: Low specificity phosphatase (HAD superfamily) # Organism: Vibrio cholerae # 5 164 15 174 185 147 45.0 1e-35 MASYALLEQARHLQALVLDVDGILSDGFVTLTNTGDEIKSFDIRDGLGMKLAQQAGMKVI IITGRKSNIVEKRMSDLGVDLVFQGREDKGSALREACAQFNILPSDCLYMGDDWPDLSAF AIAGMSVTVPNGHEEVRRRANLVTQAMGGRGAVREVCDMLLIAKGIYQELLEKYLAVPH >gi|333032560|gb|GL891866.1| GENE 6 5508 - 6056 487 182 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002306 NR:ns ## KEGG: ABBFA_002306 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 182 1 182 182 311 100.0 6e-84 MDTRVLYIVAVVVAAVSGGYYYYSGKAKKLDIGSAKNMTYSAQGVHLTQTDDKGNLYIRA EVRQLEQDMQQKTSKLDQLNATMYKLGKVDATFFAKQAYGYDDNQKVVLSGDVVATKLAP QGTIEFQTDELTGYPKTRDIETNHQVTVQSPQGEFVSKGLKANLNNGQYEFFNIRGKYAP KS >gi|333032560|gb|GL891866.1| GENE 7 6040 - 6588 582 182 aa, chain + ## HITS:1 COG:PA4460 KEGG:ns NR:ns ## COG: PA4460 COG1934 # Protein_GI_number: 15599656 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 24 165 16 157 175 79 30.0 3e-15 MHQSLNLKRSSAFLKQAAVITFVALSSASTFALPSDRNQQISLVADRATYNEKTGLTTYT GNVVIEQGTMKLQADSIVATLNSKREIQTITAKGRPSKFQQQISADKGIARGEGQTIVYN ADTGIITLSGGAYLYQDGSSIRGNTLKYSMNKGDVEAQGSSSNRVQIIIPPSSSKSFPGA RD >gi|333032560|gb|GL891866.1| GENE 8 6588 - 7334 284 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 11 244 12 242 312 114 31 8e-25 MQQALQQPQTLCIKHLAKNYSKRWVVKDVSFSMQSGQIVGLLGPNGAGKTTSFYMVVGLV RMDKGEIHLDDLDMSDLAMHERARKGIGYLPQEASIFRKLTIAENIMSILETRKDLNKQQ RQQRLTELLNDFKISHIKDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISV GDIKDIIQTLKDRGIGVLITDHNVRETLAICERAYIVSEGSVIAEGTPQEILDNEQVRKV YLGDDFTV >gi|333032560|gb|GL891866.1| GENE 9 7543 - 9075 1328 510 aa, chain + ## HITS:1 COG:STM2690 KEGG:ns NR:ns ## COG: STM2690 COG1538 # Protein_GI_number: 16766004 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Salmonella typhimurium LT2 # 104 510 60 469 469 199 33.0 2e-50 MIGYNQRRVRGICRKQAFLKGLMLLSTLHVPVVIYAAKPSEQYHTLKENLSQLFVPKSSD DFKVAKMHKLSNFKLDRSIVQEFPTVQLNDNRASSFSNLPSRTMTLQDAVKIAIQRSPDI SQSIATLAGQNSGVDVAKAGYYPQLSGGITTGDLSSGERGRQLLTLSATQMLYDFGKVKS GVDVEEAKVQVEQANVLVSVDTLALDVAQTIVNIQRYLQLNKIAEQQIAGIRRIQEIANL RANAGVASQADPIQAQSYLQAAQSALIAQQSLLRQYQQHLRTLLGADVSHTGWIISDDLV KQSDLYGEPEFNTIPKMIAAQAGVEVAKAQKQQTRLTRYPTLAVKGSVSQAINGKNPNND KDDGLYSSVMLEATSQFYQGGATASQVKMASYAEEAAKAKVNSVYMDVLDQIRTSREQIE NKQRQMQVLASRQATTVRTRELYQEQYKLGTRSLVDLLNAEQAIHSANSELESARYDIYS SIVQYIEATGRSRQAYGLNNISIQGFEVQP >gi|333032560|gb|GL891866.1| GENE 10 9072 - 11213 242 713 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 489 691 145 346 398 97 32 6e-20 MMTKINYQPWLQAVLTIAKHYRIEPSEERIRLQLDWNQNQNLDNVLQLMTRQVGLNLRKA PFSLDLLNPWRLPVMVEFNDGQVGVIDKADTQGNVSIQFSGDQGLSQSLSLDALKTTLKN VYILRPETSIPDARIDEYIKPYEANWFWSIVLRDWKRYVDIMFASLIANVLALATIIFSM QVYDRVVPSQSIPTLWVLAGGVLIAALFEFTLRVSRVYLSDIIGKRADLRVSDRVFGHAL RIKNKDRSKSTGSFISQIRELEGVRELVTSTTISAIADFPFFFLFLVIFAIIGGKLFWVM LLVVPLMILPGILVQKKLAQLAQEGMRESSIRNAILVEAVQGIEDIKLLRAESRFQNQWN HMNEVSADIGMRQRKIVGTLMAWTQMVQGLTYAIVVLVGCFAVMDGEMTTGALVACSILS SRMLGPIAQITGVLGRLQQAKVAKQSLDELMQRPIDQADRSHLVHKAVLNGDYELKNILF QYGEEDPRPSLAIRHLKIRAGEKIAILGRNGAGKSTLLQLLSGMQVPTQGAVHLDGLDLS LIDPSDVRRDMGLLNQNAHLFYGTIRENLTLGAPLATDEDILRALVVTGALSFVQEKKEG LDYLVLEGGVGFSGGQKQALLLARLLIRQPNILLLDEPTAAIDDVAEKQLIDHLKGWLAH RTLVVATHRRAVLELVDRIIVVNEGKIVMDGPRDQVLNQSTAQQKQVSQGGNS >gi|333032560|gb|GL891866.1| GENE 11 11210 - 12400 1334 396 aa, chain + ## HITS:1 COG:ECs0544 KEGG:ns NR:ns ## COG: ECs0544 COG0845 # Protein_GI_number: 15829798 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Escherichia coli O157:H7 # 13 396 8 391 391 466 63.0 1e-131 MSEQQQELTRSMNVSYSEPPLPRASLVIWIVGIGLVIFFIWAWFFKLEEVSTGTGKVIPS SKEQVIQSLEGGILTKLNVQEGDIVQKGQILAQLDPTRFASNVGESRSLLIAAQATAARL RAEVNGTPLVFPEIVAQDPKLVHEETALYESRRADLEQTLSGLRQALQLVQQELAMTEPL VAKGAASEVEVLRLRREANDLQNKMNDARNQYYVKAREELSKANTDTQTQQQVVMGRNDS LQRAVFKAPVRGVVKEITVTTHGGVIPQNGKLMTIVPIDEQLLIEARILPRDIAFIRPGQ EALVKITAYDYSIYGGLKGKVTVISPDTIRDEVKQDQFYYRVYIRTDSDKLYNKEGKAFG ITPGMVATVDIRTGEKTVLDYLLKPFNKAKEALRER >gi|333032560|gb|GL891866.1| GENE 12 12493 - 13092 552 199 aa, chain + ## HITS:1 COG:PA0168 KEGG:ns NR:ns ## COG: PA0168 COG1739 # Protein_GI_number: 15595366 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 1 187 1 188 196 174 46.0 1e-43 MAFTIASPVTFEEEIKKSRFQAIAAPVENEQQVKEFLELNKDISTTHQCWAWKIGHNVRF NDDGEPSGTAGRPILATIEGNDLTNIIVMVNRWYGGIKLGTGGLVRAYGGCAGQSLLLAE RIELIAKKTIHFSCHFNEWAIFQYELTQQQIEYQESYTATGVDIEARLQVHQIEPLALKL RDVTRGREELKVEEELTDD >gi|333032560|gb|GL891866.1| GENE 13 13085 - 13696 666 203 aa, chain + ## HITS:1 COG:MJ1064 KEGG:ns NR:ns ## COG: MJ1064 COG0110 # Protein_GI_number: 15669253 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Methanococcus jannaschii # 65 203 73 214 214 84 36.0 1e-16 MTDSLLKYREQHKHRLNYMPWLYWTLKPKHRVWAEEWQKEYQAYLMDMETVEIGENCFIS PLAHIFAEPGRKIKIGNNCFIAADCSLHGPLEIGNEVAINHHCILDGGRAGIKLHDQVRI AAYCHLYAFDHGMQLDRPLYQQPVRSQGIEIEKDVWLGAHVGIKDGIKIGKHAVVGMNSM VTKDVEPYHIVGGNPAKFIRLRE >gi|333032560|gb|GL891866.1| GENE 14 13852 - 14694 793 280 aa, chain + ## HITS:1 COG:slr1230 KEGG:ns NR:ns ## COG: slr1230 COG0589 # Protein_GI_number: 16330107 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Synechocystis # 1 277 1 284 287 120 28.0 3e-27 MNRVIACIDSSPCINAIADAAAWVAKATGRELVLLQILDYYPASYHLGEISGVIGFESNA MLLKELAELEQKQSELALDYSNNLLRHISDLIKEKHGITCSKIQEKGDFLEQSFNLLHEN DIVILGRVGERAAEKHKPIGSNVENFIRGANCTVLTIGENFKVPTRFIFAYEYSPTCQKM MRRIAQSDLLRTLQCHLVYVGDHPEILNEPEHYLKQAGLDVVTVYRYGDVAQNILEYQQE HGIQIIVLGAFSHSKIHQFFLGSIATTIFRNATVPLLVAK >gi|333032560|gb|GL891866.1| GENE 15 14811 - 15479 744 222 aa, chain - ## HITS:1 COG:BH1828 KEGG:ns NR:ns ## COG: BH1828 COG4122 # Protein_GI_number: 15614391 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Bacillus halodurans # 2 222 4 222 223 191 44.0 7e-49 MQQMWTDIDEYIDSHLIPEDPRLDFALKNTDEHGFSNHLAVAPNQGMFLQMLIQMNKCKR VLEIGTFAAYSTIWLGRALPEDGYLLTIEGRDTHAEMAQKNIDHANLPVKVDLKLGRAAD VLSAIDPQSIEPFDFIFIDADKQGYPEYLELSLKFSKSGTIIVLDNVIRAGDILNPENKK PSIEGIRETFKALENHPQILSCTALQTVGSKGHDGFAIAIVK >gi|333032560|gb|GL891866.1| GENE 16 15619 - 16290 544 223 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2480 NR:ns ## KEGG: ABAYE2480 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 223 18 240 240 474 100.0 1e-132 MVGCASSPQHTTTGKTSPSGKRIFIPQERVIIERPIPPKVEPASYRAWLNTGDHYERVRE YEKFLARHDVAGIVPSFELLRSARDWQKCGRSEYAVPNRELWNNSLSTLRVFKYLIAAKV LTDFEVTSVYRDLPLNECAGGASSSKHLFNSAIDFRIGPEVPQPQDYAFIENTKFKLCQF WAQHGQSLNLGIGLYSSGQIHIDTQGYRTWGPDLTRNTSMCNF >gi|333032560|gb|GL891866.1| GENE 17 16471 - 16794 383 107 aa, chain - ## HITS:1 COG:PA3621 KEGG:ns NR:ns ## COG: PA3621 COG1146 # Protein_GI_number: 15598817 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Pseudomonas aeruginosa # 1 107 1 107 107 148 74.0 2e-36 MTFVVTENCIKCKYQDCVEVCPVDCFYEGPNFLVINPDECIDCALCEPECPANAIFSEDE LPEGQEVFIELNAELSQKWPNITQIGEQPADREEWNGKPDKLQYLEK >gi|333032560|gb|GL891866.1| GENE 18 17139 - 17714 427 191 aa, chain - ## HITS:1 COG:PA2455 KEGG:ns NR:ns ## COG: PA2455 COG3153 # Protein_GI_number: 15597651 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Pseudomonas aeruginosa # 19 191 5 175 175 108 36.0 5e-24 MYRHVCSYFKENKISIFLRPLQYTEIDLIWQQINRRELITQLYLQKQEHLELTDCFYDVK HWDAYHLENDPPKLKELYEQGALFIGAFDASEQLAGISVVSNQTITDYPDAKLLQYFYVD ADQQGKGIGAKLMQAAKESAKQLEAHQLYISATPSKRTVDFYIKHGAVVLKHPDRQLWEL EPEDIHLLCTL >gi|333032560|gb|GL891866.1| GENE 19 17734 - 20379 2918 881 aa, chain - ## HITS:1 COG:PA3620 KEGG:ns NR:ns ## COG: PA3620 COG0249 # Protein_GI_number: 15598816 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Pseudomonas aeruginosa # 7 876 1 852 855 838 52.0 0 MNSAEIMADLSNHTPMMQQYLKVKKDYQHALLFYRMGDFYELFFEDAHLAAKLLGITLTH RGKANGNPIPMAGVPYHSAEGYLARLVKAGRTVAICEQVGEVTGKGPVERKVVRILTPGT LTDDALLTSYQSSNLVALCIHQNQIGFALLDLSAGIFKVQQQDYKPEQLPIELARLMPSE ILIDEDLVDPNIIEQIKKHLDCPVTKRPNVDFNLNNAQKTLCDQFSVSTLSGFGLDPLPL AKAAAAALIHYAKETQKTALPHIRSILLEQSSDFIALDPITRRNLEIIEPLFEHGTSLFQ LVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYHESPVRLVLKEIGDIERV LSRVALGSARPRDLVQLRHACAQIPFLRNALAPVVQAKKSKLLGQLDQELGDFKSLHQHL MAAIVENPPVLLRDGNVIAEGYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGY NRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSESRALAREKAL FEALLENLRENIAHLQMMSSAIAQIDVIANFAHQARLNNWARPEFTPETGIKIQGGRHPV VEALSKAPFTPNDTFLDVQHRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAKL GPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLSL AWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGNLILLHKVQQGPAS QSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSEVTPSTQVIE KVIEVEVSSPALDLLKQIEVDNLTPRQALEQLYELKAALNS >gi|333032560|gb|GL891866.1| GENE 20 20360 - 20491 67 43 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01241 NR:ns ## KEGG: ACICU_01241 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 43 1 43 43 67 100.0 1e-10 MISALFMRNKPLKKRKIYFWFINQFQVFKNECNSRKVQQLDEL >gi|333032560|gb|GL891866.1| GENE 21 20654 - 21121 306 155 aa, chain - ## HITS:1 COG:mll7935 KEGG:ns NR:ns ## COG: mll7935 COG1522 # Protein_GI_number: 13476573 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 2 149 4 151 159 135 43.0 3e-32 MSEISLDNFDYAILRILQKDNKTSHREISEKIGLSAASVQRRITRMEEKEIILKNCAILN PLKFGEKITSIIEVRLSEDRSVVMDRAKLYFASVEEIQQCYFVNGGVSFIIIMLSNNLSH FESLVRKHFADNEDVKTYRTLIVLDRVKVNFELNI >gi|333032560|gb|GL891866.1| GENE 22 21243 - 22100 684 285 aa, chain + ## HITS:1 COG:PA1360 KEGG:ns NR:ns ## COG: PA1360 COG5006 # Protein_GI_number: 15596557 # Func_class: R General function prediction only # Function: Predicted permease, DMT superfamily # Organism: Pseudomonas aeruginosa # 16 276 19 281 297 156 36.0 4e-38 MIETNSKQGMAFAAAFLSLVSVQIGAAIAKVLFPILTAEGVTLTRLALSACFLWIVFKPW RQWNKQTNWKNLIIYGSILTLMNTLVYKAFSYMSVGIAISIEVLGPLTVAILMSKNKLDY FWGGLSIIGLLLLPMGNANNNFSFIGMTYALLAAVGWGLYVIYGSKVAQGGGSSVATGMF IAALFATPLGASHFIHIFDSYKILFTCLLMAMLASAIPFILDMIAMKKLHPRVFGILLSA SPAVSALAGWLILNERLNSFQVLGITIIMASCAGCSYFSYKRNKV >gi|333032560|gb|GL891866.1| GENE 23 22868 - 23956 701 362 aa, chain + ## HITS:1 COG:sll0267_6 KEGG:ns NR:ns ## COG: sll0267_6 COG2200 # Protein_GI_number: 16331091 # Func_class: T Signal transduction mechanisms # Function: FOG: EAL domain # Organism: Synechocystis # 107 355 4 250 253 209 43.0 6e-54 MFPVVFCLFFDVATPDRPRVAHLFLPAGAILGYLNYRREPSFLQIVLILLSIGCFIFFSG SSFTLDSAIPLSEDIRDHGGWIATCVATLMICISIYTMQLEIQIESSMEHNLRLALTKQQ FELFYQPQVNSSEKLIGAEALLRWHHPVLGYIPTKEFIPAAATFGLMPEIGEWVLAQACK VLQDWSKKEETKDLTLSINISADHFMQSNFEHTVIGLVQRYDFNPSRLILEITENIALNN CASMIEKMHFLSKHGIQLSLDDFGTGYSSLSYLQKMPIKQIKIDRSFVQAALDDKRSNKL VTGIIKIGLDLNLRVLVEGIETAEQFSAFKSNGCTEFQGYLWGCPMSLNEFIKQLPIKTD KE >gi|333032560|gb|GL891866.1| GENE 24 24087 - 25019 553 310 aa, chain + ## HITS:1 COG:PA3242 KEGG:ns NR:ns ## COG: PA3242 COG1560 # Protein_GI_number: 15598438 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Pseudomonas aeruginosa # 12 310 5 306 312 211 38.0 2e-54 MTKPEAQYQSGQFQFSFLSLKYWGIWFTAFILMFLAYLPWAIQWRLAKLFSKIAWTLLGS RRKTTLRNLGACFPEKTPEQIEAKAKSVFTDTMIGIFEALNAWYCPAWFKKRVHIEGLEH LNDNRDRGILLLGTHSTLLDAGGAACTLFFDMDVVYRPQNNPFMDFLIHRSRARVYKNQI AKDNMRSLIEKLKNGHAIWYSPDQDFGLKQGVMASFFGIQAATVTAHRRLMDISNAVAIP LYFYRSGDIRDPQYNVLVEPKLENFPSECEVNDAERVNKIIENQIRIAPTQYMWFHRRFK TRPAGEAKFY Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:58:40 2011 Seq name: gi|333032559|gb|GL891867.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld103, whole genome shotgun sequence Length of sequence - 1088 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 35 - 457 354 ## ABSDF2494 hypothetical protein 2 1 Op 2 . + CDS 429 - 836 352 ## ABAYE2737 hypothetical protein 3 1 Op 3 . + CDS 833 - 1063 197 ## gi|332874302|ref|ZP_08442220.1| conserved domain protein Predicted protein(s) >gi|333032559|gb|GL891867.1| GENE 1 35 - 457 354 140 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2494 NR:ns ## KEGG: ABSDF2494 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 139 22 160 161 242 90.0 5e-63 MPTRYNTGEYSYDLEYHYGDMSASMEMLRARLIELLTPHLSGRYVKWREAYFTWFTKCGG DSGWMFCVGPHEFHIDGALRRYYSGSIDITYNQKDRYFLVGEKKKVKCKACKGFGFIRDD GWGHIDKCEMCDAEKGASHE >gi|333032559|gb|GL891867.1| GENE 2 429 - 836 352 135 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2737 NR:ns ## KEGG: ABAYE2737 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 8 107 47 145 149 131 87.0 1e-29 MQKKEPAMSEFEGKSGKWAWEIQKEQQAKVEELEGKLKQAYEDVDTFAEAYERECGFKAQ LAKDKAELQKRVDQQGLIIANVMSIASDLQKSWSMFEIGKKLEQALKGDQYDEHRKKAEE AISKGASLTNHRIEL >gi|333032559|gb|GL891867.1| GENE 3 833 - 1063 197 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332874302|ref|ZP_08442220.1| ## NR: gi|332874302|ref|ZP_08442220.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 76 1 76 76 144 100.0 2e-33 MNTFKEAQIIIGIDPDLEKSGVAILGSDLQLKNLTFPETVELFRNEQDSIKKVVIEAGWE NKKANFRVGGGHSRQV Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:58:52 2011 Seq name: gi|333032558|gb|GL891868.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld104, whole genome shotgun sequence Length of sequence - 1019 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 110 - 589 260 ## ABBFA_002525 hypothetical protein - Prom 616 - 675 80.4 2 1 Op 2 . - CDS 683 - 907 93 ## AB57_2674 hypothetical protein - Prom 946 - 1005 2.7 Predicted protein(s) >gi|333032558|gb|GL891868.1| GENE 1 110 - 589 260 159 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002525 NR:ns ## KEGG: ABBFA_002525 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 133 724 856 1141 266 98.0 2e-70 MVQQEGLILTLSHDVDFIAGKSYVIYLQMGDGTVDLIPVTPGSAKNKVVLGRLPNGALKL SPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVPVD DSPIYIRYDQLDIGGGGANPLPLMRHLSQNYWFYVTGSL >gi|333032558|gb|GL891868.1| GENE 2 683 - 907 93 74 aa, chain - ## HITS:1 COG:no KEGG:AB57_2674 NR:ns ## KEGG: AB57_2674 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 72 615 686 1148 156 98.0 3e-37 MLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPADDSRINIYLPDKGAKNPKEVKSVG VRNKWQAHFNAYAS Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:58:58 2011 Seq name: gi|333032557|gb|GL891869.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld105, whole genome shotgun sequence Length of sequence - 1259 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 284 385 ## AB57_2696 hypothetical protein - Term 299 - 328 1.2 2 1 Op 2 . - CDS 350 - 1258 1057 ## COG5492 Bacterial surface proteins containing Ig-like domains Predicted protein(s) >gi|333032557|gb|GL891869.1| GENE 1 2 - 284 385 94 aa, chain - ## HITS:1 COG:no KEGG:AB57_2696 NR:ns ## KEGG: AB57_2696 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 94 1 94 221 154 95.0 1e-36 MKIIYTRIAAAAALETGIIANPDYYENPNLKAKEVIIYGNYPKIQKDYETLEVPVEVRKL KEPEKTTLATVNVAVGITPELQAVMDDAKAECEK >gi|333032557|gb|GL891869.1| GENE 2 350 - 1258 1057 302 aa, chain - ## HITS:1 COG:YPO2110 KEGG:ns NR:ns ## COG: YPO2110 COG5492 # Protein_GI_number: 16122345 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 295 17 312 401 363 62.0 1e-100 QTAYLERLQDNLNVFNQASNGAIVYRNEIIEGDFNKEAFYKVGGSIKHRDVNSTAKVVPE KIGSGESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMVVGYDLADALVAGRLEYSLASL KAAISSNPDMVAKGSIVVDGRKALTRGMRKFGDKFGRIGLWVMNSDTYFDIVDDAITKQI YGESEIVIYGGLPGTLGKPVLVTDAVGDNDAFGLQYGAVTVTESQVPGFRAYDINDEENL AIGMRAEGAFNLDILGYSWDTSKGENPDLTLLGSSANWIKYATSNKMTAGTLLDLSGTAT TG Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:59:07 2011 Seq name: gi|333032556|gb|GL891870.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld106, whole genome shotgun sequence Length of sequence - 13781 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 5, operones - 2 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 277 234 ## ABBFA_003244 hypothetical protein + Term 413 - 451 -0.5 - Term 255 - 286 3.4 2 2 Tu 1 . - CDS 306 - 662 517 ## ABBFA_003245 Epstein-Barr nuclear antigen 1 - Prom 789 - 848 3.2 - Term 806 - 857 14.0 3 3 Tu 1 . - CDS 876 - 1241 645 ## ABBFA_003246 Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1) (EBNA-1) - Prom 1308 - 1367 4.1 - Term 1325 - 1372 3.2 4 4 Op 1 58/0.000 - CDS 1409 - 5602 4324 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 5 4 Op 2 28/0.000 - CDS 5689 - 9777 4027 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 - Prom 9940 - 9999 10.3 - Term 10006 - 10043 6.2 6 5 Op 1 47/0.000 - CDS 10083 - 10454 579 ## PROTEIN SUPPORTED gi|126640374|ref|YP_001083358.1| 50S ribosomal protein L7/L12 7 5 Op 2 43/0.000 - CDS 10497 - 11003 806 ## PROTEIN SUPPORTED gi|169634596|ref|YP_001708332.1| 50S ribosomal protein L10 - Prom 11225 - 11284 2.5 - Term 11207 - 11239 -0.8 8 5 Op 3 55/0.000 - CDS 11323 - 12018 1133 ## PROTEIN SUPPORTED gi|169797456|ref|YP_001715249.1| 50S ribosomal protein L1 9 5 Op 4 45/0.000 - CDS 12022 - 12450 713 ## PROTEIN SUPPORTED gi|169634598|ref|YP_001708334.1| 50S ribosomal protein L11 - Term 12511 - 12539 2.3 10 5 Op 5 46/0.000 - CDS 12559 - 13092 718 ## COG0250 Transcription antiterminator 11 5 Op 6 . - CDS 13100 - 13540 308 ## COG0690 Preprotein translocase subunit SecE - Prom 13563 - 13622 7.3 - TRNA 13616 - 13691 81.1 # Trp CCA 0 0 Predicted protein(s) >gi|333032556|gb|GL891870.1| GENE 1 2 - 277 234 91 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003244 NR:ns ## KEGG: ABBFA_003244 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 10 91 84 165 165 167 100.0 2e-40 SYLFLSCTEIVWDKAAEINFLSPGRSTVYADIRVDLAEIEQIRELAENYAPVLRTYHLNI FDESGVRIAEVQKTLYIRRKKAKPSTNKISA >gi|333032556|gb|GL891870.1| GENE 2 306 - 662 517 118 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003245 NR:ns ## KEGG: ABBFA_003245 # Name: not_defined # Def: Epstein-Barr nuclear antigen 1 # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 118 1 118 118 80 100.0 2e-14 MNKKIGLISTVILSTVMFTGCQNMSPSDQRIGAAAAGGALGGGLGNHVGGGIGAGLGAAV GAGVGSNTQGGSKQTTTKSAIGAGIGSVVGKAIIGGDTGAAIGGAIGGGAGAAIEEKK >gi|333032556|gb|GL891870.1| GENE 3 876 - 1241 645 121 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003246 NR:ns ## KEGG: ABBFA_003246 # Name: not_defined # Def: Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1) (EBNA-1) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 121 1 121 121 84 100.0 1e-15 MKKMMMIAGVGLMSTTLFVGCQNASPESKRIGSAAIGGGAGGAVGKHIGGNIGAGLGAAL GAGVAANAKGSSSKTVRNSAIGAGVGAILGGAVIGGDAGAAAGGALGGSAGAAYEEKKGK Y >gi|333032556|gb|GL891870.1| GENE 4 1409 - 5602 4324 1397 aa, chain - ## HITS:1 COG:PA4269 KEGG:ns NR:ns ## COG: PA4269 COG0086 # Protein_GI_number: 15599465 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Pseudomonas aeruginosa # 1 1394 1 1396 1399 2107 74.0 0 MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDG LFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIW FLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFTALEEHGDE FVAKMGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPE WMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNE KRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVI TVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASV IRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLE AQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNR ALATGQVAIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPEGLSFDMINLE MTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIID KAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEK QKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFIS THGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTSGGLVMTPFIQGGDVIEPL RDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVC AKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNK GTVRFHNVKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPYGASILLKDGELVEAGG IVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLR PAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADL FEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHV NRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKV DIIDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAAS FQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHALHND FSEVDQAFSQALNSEQF >gi|333032556|gb|GL891870.1| GENE 5 5689 - 9777 4027 1362 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 4 1358 8 1387 1392 1555 57 0.0 MAYSYTEKKRIRKNFGKLPQVMDAPYLLSIQVDSYRTFLQDGKSPKNREDIGLQAAFRSV FPIESYSGNAALEFVEYSLGKPEFDVRECILRGSTYAAPMRVKIRLIIKDRETKSIKDVR EQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDHDKGKTHSSGKVLYSARIIP YRGSWLDFEFDAKDLVYVRIDRRRKLLATVVLRALGYNNEQILNLFYEKVPVYLDMGSYQ IDLVPERLRGEMAQFDITDNEGKVIVEQGKRINARHVRQMEAAGLTKLSVPDEYLYERIT AEDITLRDGEVIAANTLLSHEVMVKLAEGGVKQFNILFTNDIDRGSFVADTLRADLTRDR EEALVEIYKVMRPGEPPTKEAAENLFNNLFFSSERYDLSPVGRMKFNRRLGRPYEVGTDQ KSREVEGILSHEDIIDVLRTLVEIRNGKGEVDDIDHLGNRRVRSVGEMTENQFRVGLVRV ERAVKERLSQAETDNLSPQDLINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRVS ALGPGGLTRERAGFEVRDVHQTHYGRVCPIETPEGPNIGLINSLSVYAKANDFGFLETPY RKVVDGRVTDDVEYLSAIEEVGTVIAQADSAVDKDGNLTEEFVSVRHQGEFVRMPPEKVT HMDVSAQQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRADKPLVGTGMEANVARD SGVCVIANRGGVIEYVDASRIVIRVNEDEMVAGEAGVDIYNLIKYTRSNQNTCINQNVIV NLGDKVARGDILADGPSTDMGELALGQNMRVAFMTWNGYNYEDSILLSERVLQEDRLTSI HIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVTAGDILVGKVTPKG ETQLTPEEKLLRAIFGEKAADVKDSSLRVPSGTKGTVIDVQVFTRDGLEKDDRALAIEKA QLDSYRKDLKEEYKIFEEAARERVIRLLKGQESNGGGSTKRGDKLSEDLLSGLELVDLLE IQPADEAIAERLTQIQVFLKEKSAEIDEKFAEKKRKLATGDELTTGVLKVVKVYLAVKRR IQPGDKMAGRHGNKGVVSNILPVEDMPHDANGVPVDIVLNPLGVPSRMNVGQILETHLGM AAKGLGDKIEKMLKEQRTVLELREFLDKIYNKVGGEQEDLDSLTDEEILALAGNLRAGVP LATPVFDGAEESQIKDLLELADISRTGQTVLFDGRTGEQFDRPVTVGYMYMLKLNHLVDD KMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVEGR TRIYKNIVDGNHYMDPGMPESFNVLTKEIRSLGINIELKNGD >gi|333032556|gb|GL891870.1| GENE 6 10083 - 10454 579 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126640374|ref|YP_001083358.1| 50S ribosomal protein L7/L12 [Acinetobacter baumannii ATCC 17978] # 1 123 1 123 123 227 100 3e-59 MALTNEEILNAVAEKTVLELVELISAFEEKFNVSAAAVAVAAPAGGAAAAAEEQSEFNVE LTSFGANKVAVIKAVREATGLGLKEAKDLVEGAPQVLKEGVSKEEGEELKKKLEEAGATV TLK >gi|333032556|gb|GL891870.1| GENE 7 10497 - 11003 806 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634596|ref|YP_001708332.1| 50S ribosomal protein L10 [Acinetobacter baumannii SDF] # 1 168 1 168 168 315 100 1e-85 MALLIEDKKQIVAEVSEVASKAFAAVVADYQGLSVEQLTTLRVEARKLGVTTRIVRNTLA KRAFQGTQFDILNDNLVGPTILGFSTSEDDMGAAARLFEEFAKTNKAFELKAAAFDGKVY QGADVSVIANLPNQEKALTMLASVLQAPISKLGRLITALKEKNESEAA >gi|333032556|gb|GL891870.1| GENE 8 11323 - 12018 1133 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169797456|ref|YP_001715249.1| 50S ribosomal protein L1 [Acinetobacter baumannii AYE] # 1 231 1 231 231 441 100 1e-123 MAKLTKRQKAIAAAVEANKVYTLEEAVQVLNSLPAAKFKESLDISVNLGVDPRKSDQVVR GATTLPAGTGKTVRVAVFAQGAQAEAAKEAGADVVGFDDLAESIQGGNLDFDVVIAAPDA MRVVGKLGTILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQARYRVDKAGIIHAAIGQVGF DAAAIRQNVETLVADLKKLKPATSKGVYIKKITLSSTMGPGLTVDVNNVSN >gi|333032556|gb|GL891870.1| GENE 9 12022 - 12450 713 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169634598|ref|YP_001708334.1| 50S ribosomal protein L11 [Acinetobacter baumannii SDF] # 1 142 1 142 142 279 100 9e-75 MAKKIDGYIKLQVPAGKANPSPPIGPALGQRGVNIMAFCKEFNAATQKVEPGLPIPVVIT VYNDKSFTFIMKTPPASILLKKAAGIQKGSSVPNKTKVGKLTRAQLEEIATTKEPDLTGA DLDARVRTIAGSARSMGLEVEL >gi|333032556|gb|GL891870.1| GENE 10 12559 - 13092 718 177 aa, chain - ## HITS:1 COG:PA4275 KEGG:ns NR:ns ## COG: PA4275 COG0250 # Protein_GI_number: 15599471 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Pseudomonas aeruginosa # 2 175 3 176 177 246 68.0 1e-65 MKRWYIIHAYSGYEKQVMRSLKERIQRSAVADSFGDVLVPTEEVVEMKDGKKRKSERKFF PGYVLVEMEMNDDTWHIVKECPKVLGFIGGTPEKPAPITQREADAILARVRNTGEAPRPK TMFEPGEELLVIDGPFTDFKGVVEEVQYDKSRLTLTINVFNRPTQVELEFRQVEKTI >gi|333032556|gb|GL891870.1| GENE 11 13100 - 13540 308 146 aa, chain - ## HITS:1 COG:VC0322 KEGG:ns NR:ns ## COG: VC0322 COG0690 # Protein_GI_number: 15640349 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecE # Organism: Vibrio cholerae # 18 144 7 125 131 60 33.0 7e-10 MSNDKSRDALSDAPIPQRNNSAEVVRSGSPLDIVLWVIAIALLLSATMVNQHLPAYWAPA NDVWVRVGVIFACIVVALGLLYATHQGKGFVRLLKDARVELRRVTWPTKQETVTTSWQVL LVVVVASLVLWCFDYGLGWLIKLIIG Prediction of potential genes in microbial genomes Time: Tue Jun 21 01:59:35 2011 Seq name: gi|333032555|gb|GL891871.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld109, whole genome shotgun sequence Length of sequence - 52708 bp Number of predicted genes - 49, with homology - 47 Number of transcription units - 30, operones - 12 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 15/0.000 - CDS 3 - 369 522 ## COG1923 Uncharacterized host factor I protein - Prom 390 - 449 6.2 - Term 398 - 448 -0.9 2 1 Op 2 12/0.000 - CDS 464 - 1408 913 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 3 1 Op 3 . - CDS 1415 - 3367 2152 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 4 1 Op 4 . - CDS 3360 - 3842 429 ## COG0802 Predicted ATPase or kinase - Prom 3924 - 3983 4.4 + Prom 3857 - 3916 5.4 5 2 Tu 1 . + CDS 3954 - 4862 487 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 4882 - 4941 8.0 6 3 Op 1 . + CDS 4974 - 5282 328 ## ABSDF1620 hypothetical protein + Prom 5287 - 5346 3.8 7 3 Op 2 . + CDS 5380 - 5823 440 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 5737 - 5793 5.3 8 4 Op 1 . - CDS 5816 - 6520 525 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 6542 - 6601 4.6 9 4 Op 2 . - CDS 6621 - 6839 346 ## ABSDF1617 hypothetical protein - Prom 7030 - 7089 7.5 10 5 Tu 1 . + CDS 6792 - 6908 107 ## + Prom 7005 - 7064 5.0 11 6 Tu 1 . + CDS 7093 - 7545 426 ## COG2707 Predicted membrane protein + Term 7640 - 7679 3.1 - Term 7531 - 7568 5.7 12 7 Tu 1 . - CDS 7596 - 8516 809 ## COG0583 Transcriptional regulator - Prom 8673 - 8732 6.8 - Term 8682 - 8725 7.3 13 8 Tu 1 . - CDS 8741 - 9535 841 ## ACICU_02323 hypothetical protein - Prom 9613 - 9672 13.3 - Term 9651 - 9686 5.1 14 9 Tu 1 . - CDS 9693 - 10121 609 ## ABAYE1437 hypothetical protein - Prom 10303 - 10362 4.6 + Prom 10014 - 10073 6.2 15 10 Op 1 . + CDS 10258 - 10425 56 ## 16 10 Op 2 . + CDS 10350 - 11549 1387 ## COG2814 Arabinose efflux permease + Term 11656 - 11698 9.2 - Term 11522 - 11573 5.1 17 11 Op 1 . - CDS 11575 - 12573 1085 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Prom 12629 - 12688 5.2 18 11 Op 2 . - CDS 12697 - 13131 373 ## ABBFA_001338 hypothetical protein - Prom 13186 - 13245 11.4 - Term 13306 - 13337 3.4 19 12 Tu 1 . - CDS 13360 - 15999 3092 ## COG1049 Aconitase B - Prom 16073 - 16132 4.9 - Term 16206 - 16237 3.4 20 13 Tu 1 . - CDS 16258 - 16617 301 ## ACICU_02329 hypothetical protein - Prom 16670 - 16729 6.9 - Term 16709 - 16740 3.4 21 14 Op 1 . - CDS 16762 - 21267 4866 ## COG2911 Uncharacterized protein conserved in bacteria 22 14 Op 2 . - CDS 21294 - 21413 92 ## ABBFA_001334 surface antigen family protein - Prom 21502 - 21561 4.2 23 15 Tu 1 . - CDS 21869 - 24151 2318 ## COG0729 Outer membrane protein - Prom 24240 - 24299 6.2 + Prom 24246 - 24305 8.5 24 16 Op 1 . + CDS 24341 - 25639 968 ## COG0477 Permeases of the major facilitator superfamily 25 16 Op 2 . + CDS 25643 - 26278 890 ## COG2941 Ubiquinone biosynthesis protein COQ7 + Term 26288 - 26324 5.1 - Term 26276 - 26312 5.1 26 17 Tu 1 . - CDS 26325 - 26873 608 ## ACICU_02335 hypothetical protein + Prom 27198 - 27257 4.9 27 18 Tu 1 . + CDS 27281 - 28702 863 ## COG0174 Glutamine synthetase + Term 28736 - 28781 6.3 28 19 Op 1 16/0.000 - CDS 28781 - 29497 719 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 29 19 Op 2 15/0.000 - CDS 29509 - 32163 2283 ## COG2205 Osmosensitive K+ channel histidine kinase 30 19 Op 3 18/0.000 - CDS 32202 - 32807 722 ## COG2156 K+-transporting ATPase, c chain 31 19 Op 4 20/0.000 - CDS 32821 - 34854 2435 ## COG2216 High-affinity K+ transport system, ATPase chain B 32 19 Op 5 . - CDS 34869 - 36578 1591 ## COG2060 K+-transporting ATPase, A chain - Prom 36696 - 36755 4.0 33 20 Op 1 . - CDS 36837 - 37274 310 ## ACICU_02342 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3) 34 20 Op 2 . - CDS 37231 - 37611 339 ## COG1539 Dihydroneopterin aldolase 35 20 Op 3 . - CDS 37627 - 38925 1381 ## COG0661 Predicted unusual protein kinase 36 20 Op 4 . - CDS 38984 - 39760 690 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 - Prom 39931 - 39990 4.4 + Prom 39830 - 39889 4.6 37 21 Tu 1 . + CDS 39930 - 40508 619 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family - Term 40503 - 40549 5.2 38 22 Tu 1 4/0.091 - CDS 40553 - 42196 1583 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases - Prom 42259 - 42318 3.7 - Term 42346 - 42376 1.1 39 23 Op 1 6/0.091 - CDS 42417 - 43553 1177 ## COG1960 Acyl-CoA dehydrogenases 40 23 Op 2 . - CDS 43572 - 44342 192 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 44449 - 44508 6.2 + Prom 44300 - 44359 4.4 41 24 Tu 1 . + CDS 44509 - 45537 1017 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 45551 - 45596 -0.9 + Prom 45615 - 45674 7.2 42 25 Op 1 21/0.000 + CDS 45781 - 46755 786 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 43 25 Op 2 . + CDS 46759 - 47598 841 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 47613 - 47654 3.1 44 26 Op 1 32/0.000 - CDS 47601 - 48416 374 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase 45 26 Op 2 . - CDS 48416 - 49504 1485 ## COG0216 Protein chain release factor A - Prom 49539 - 49598 4.7 - Term 49647 - 49680 2.4 46 27 Tu 1 . - CDS 49695 - 50513 780 ## COG0693 Putative intracellular protease/amidase - Prom 50584 - 50643 3.4 + Prom 50536 - 50595 3.5 47 28 Tu 1 . + CDS 50654 - 51556 772 ## COG0583 Transcriptional regulator + Term 51689 - 51729 -0.2 + Prom 51566 - 51625 8.7 48 29 Tu 1 . + CDS 51754 - 52176 564 ## ABAYE1403 hypothetical protein + Term 52245 - 52281 -1.0 + Prom 52196 - 52255 7.2 49 30 Tu 1 . + CDS 52411 - 52708 357 ## AOLE_06375 17 kDa surface antigen family protein Predicted protein(s) >gi|333032555|gb|GL891871.1| GENE 1 3 - 369 522 122 aa, chain - ## HITS:1 COG:VC0347 KEGG:ns NR:ns ## COG: VC0347 COG1923 # Protein_GI_number: 15640374 # Func_class: R General function prediction only # Function: Uncharacterized host factor I protein # Organism: Vibrio cholerae # 1 66 1 66 87 126 86.0 8e-30 MSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAIS TVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGG FG >gi|333032555|gb|GL891871.1| GENE 2 464 - 1408 913 314 aa, chain - ## HITS:1 COG:HI0068 KEGG:ns NR:ns ## COG: HI0068 COG0324 # Protein_GI_number: 16272042 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Haemophilus influenzae # 8 307 6 299 311 278 52.0 1e-74 MSNQLPVINLMGPTASGKTALACELYERGNFELISVDSALVYKDMDIGTAKPTREEQELY PHHLIDIITPLEVYSAAQFVEDACALIDEMHSRGKTPILVGGTMLYFKALLEGLSSNLPS ADANVRAAIEEKAANEGWQAVYDELVAVDPAAGVKFKVSDKQRIIRALEVYRITGQPITK LQAEQPKNVPYRYTFHNYALLPDRLELHQRIEQRLSKMWDIGFLSEVESLIEKYDLDENL PSMRSVGYRQALEFLLKSDMSLKKKQEMEDKALFATRQLAKRQYTWLRSLQEIHDFKTYL TIKQAKEDLRNSYG >gi|333032555|gb|GL891871.1| GENE 3 1415 - 3367 2152 650 aa, chain - ## HITS:1 COG:PA4946 KEGG:ns NR:ns ## COG: PA4946 COG0323 # Protein_GI_number: 15600139 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Pseudomonas aeruginosa # 10 649 6 632 633 488 44.0 1e-137 MTDEKLTQRRIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGST LIEIIDNGHGIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTS SQDESGIGHQVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHI EEIVRRLALTHFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAES INMRLSGWLGHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFL EVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNL SVQPQPKYQEQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQSVHYAEQTPKYNG SAQLNNALKTYLAPLRDQPANFSVDESIEPVAKVDEFPLGIAIAQLHGIYILAQNTEGLI IVDMHAAHERILLQQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLE IDLYGDEQVIVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAV RAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFARGE >gi|333032555|gb|GL891871.1| GENE 4 3360 - 3842 429 160 aa, chain - ## HITS:1 COG:YPO0369 KEGG:ns NR:ns ## COG: YPO0369 COG0802 # Protein_GI_number: 16120704 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Yersinia pestis # 8 126 4 122 156 140 60.0 1e-33 MCVMSYSLKMVLNHEEDTQRLAQALAQHVQAGVIYLIGDLGAGKTTLTRYFLQALGHKGS VKSPTYTLVEPYKINNKEIFHFDLYRLNDPYELELMGIRDYLDIQDALFLFEWPSKGGDE IPEADIVIDIQKSDDELNRFVTLTLPTEHLYQTLQEQLHD >gi|333032555|gb|GL891871.1| GENE 5 3954 - 4862 487 302 aa, chain + ## HITS:1 COG:PA2043 KEGG:ns NR:ns ## COG: PA2043 COG0564 # Protein_GI_number: 15597239 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Pseudomonas aeruginosa # 9 300 4 296 300 241 43.0 1e-63 MSSPIEFFPPMIDGVSASQVYLPPQTTAQTIYQFLCENFPHIKATEWQQRFQDGLIYAAN GEKLTLNSPYIANTHIFYYRFLANEVHVPFEHQILFENDDLLVVDKPHFLTISPTGQYVQ ETLLVRLKKQTGNEFLTPIHRLDRETAGVVLFCKRPQSRGIYQQLFADRQVNKIYHAIAA YKAELKFPQNLKLYLDKGTPFYTMQVIAHTKTNTETKIELIEHNHSWAKYCLTPTTGKQH QLRVHLNHLGIPIKNDPFYPIVQHKADDDFSQPLQLLAKQISFIDPLTKQEMVFNSQLEL TL >gi|333032555|gb|GL891871.1| GENE 6 4974 - 5282 328 102 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1620 NR:ns ## KEGG: ABSDF1620 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 102 1 102 102 162 99.0 3e-39 MRKTEVYQVRLDSQEKKQAFAVFKQLGITPAQAVRLFFKQVVLTKSIPFAIENQNINMEQ LLKLRKAKASSLNQNASTLNEDDDHEDLFEELNALLGESDKT >gi|333032555|gb|GL891871.1| GENE 7 5380 - 5823 440 147 aa, chain + ## HITS:1 COG:RSc1816 KEGG:ns NR:ns ## COG: RSc1816 COG0454 # Protein_GI_number: 17546535 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Ralstonia solanacearum # 1 143 1 144 148 99 37.0 2e-21 MIVRRATYEDLSQLAVLFDEYRQFYGASSNLEESHHFLKQRFENKESVFFIHIKDEKITG FVLLYLGFSSVACSTYYILDDVYVTPLFRRQGSAKQLIDTAILFAKQENALRISLETQSN NHESHRLYEKMGFIRDSEFQTFHCFLK >gi|333032555|gb|GL891871.1| GENE 8 5816 - 6520 525 234 aa, chain - ## HITS:1 COG:RSc0674 KEGG:ns NR:ns ## COG: RSc0674 COG1187 # Protein_GI_number: 17545393 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Ralstonia solanacearum # 3 226 10 234 252 206 48.0 2e-53 MLLEKILQSQGFGSRKYCQQLIKNGSVSIDGEVVSDLKKQFAPENFEFSVFGQNYQYREK IYIALRKPQGFECSHHPQHHQSVFSLLPETMIHRGVQAVGRLDQDTTGLLLLTDDGKYLQ ALTHPRKHVPKVYHVTTYDPVTPEQIEMLIQGVNLHQEKGVFAATDVALLETHQLTMTIH QGVYHQVKRMIAAVGNKVEKLHRHQIGQLVLPEIEDGDWVYLSEQEKQLAQNII >gi|333032555|gb|GL891871.1| GENE 9 6621 - 6839 346 72 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1617 NR:ns ## KEGG: ABSDF1617 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 72 19 90 90 99 98.0 4e-20 MDIIDIKIKDQFDQIHDAKAQLKKNLVEHENEPLKLSQRIEHIIVDNEVILPTTELLFES EQNEKIYRVIEE >gi|333032555|gb|GL891871.1| GENE 10 6792 - 6908 107 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLIKLVFDLDIYNIHKINPVLMSSDYFYITLSQKNTF >gi|333032555|gb|GL891871.1| GENE 11 7093 - 7545 426 150 aa, chain + ## HITS:1 COG:yeaL KEGG:ns NR:ns ## COG: yeaL COG2707 # Protein_GI_number: 16129743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli K12 # 5 150 2 147 148 131 60.0 5e-31 MLAQFDVNLVVLLVLLICGLLSQNAAVTIAAGVLIVIKITPLNQFFPYIQAHGLNLGILI LTIGVLTPIASGKLSGESILKSFISFKSLVAIAIGLLVAWLGGRGVKLMSSQPDVVAGLL IGTVAGVALLRGVPVGPLIAAGLLSLFIGK >gi|333032555|gb|GL891871.1| GENE 12 7596 - 8516 809 306 aa, chain - ## HITS:1 COG:PA3587 KEGG:ns NR:ns ## COG: PA3587 COG0583 # Protein_GI_number: 15598783 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 1 287 306 289 47.0 6e-78 MLEIRHLKTLVALREHGSLVAAANDLCLTPSAISHQLKELDHWYGVEVVNRRSRPVSFSN VGQRLLKLADDVLPQIQITQSDITRIVHGQTGRIIFSSECHSCFDWLMPLLNQYRQQYPD VDLDFASGFEANPHELLQNAEFDLLITADPIALKGIEYFPIFEYESRLVLSNTHRLVRAE NITVQDLAEEVLITYPVDKHRLDIMSKLFIPANIQPKQIRTTDLTQMLIQLVASGRGIAA LPDWVVNEYEQKGWVTSRRLDCVSPTGLRRTLYAGYRTEEKEKSYFEGFLKQLEKFSLKR TSYYSG >gi|333032555|gb|GL891871.1| GENE 13 8741 - 9535 841 264 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02323 NR:ns ## KEGG: ACICU_02323 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 264 1 264 264 475 100.0 1e-133 MNRLLVTSLIFVCSYSLAHEPYVAPLAYKTEQTQVPVVAGYAEEALNSEYALKDAKLTVI TPKQDPKVINAETLHKSVTVFDVPLPEDGTYILQTQASYPLKYVYDQKEWHLFFDLPADK APPKKERDYLIPADLKTKKIKTEEVTREWVLQSYLSKGKVSDIQLPNTPVKVNFSVHPNQ LKVTQAVQLTISEKGKNLPYAEINLREKGATDKQVLHFKADDKGQVELKFPKAGEYLMEV TAPVDLKLKPKNQNYMIVSLQVTE >gi|333032555|gb|GL891871.1| GENE 14 9693 - 10121 609 142 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1437 NR:ns ## KEGG: ABAYE1437 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 142 1 142 142 293 99.0 2e-78 MRKLCIACLIGMAMLSMSGCAVFMAGNQPSKKNLNVLNPGSSRNYVIAEFGAPVLSEYRD GTRVEIYTFQQGYSKWVKVGRAFGHGVADVASIGLWEVFGTPAETYFNGKETTYEVTYGE DDLVKSYKLIDFNQAFPKVKEQ >gi|333032555|gb|GL891871.1| GENE 15 10258 - 10425 56 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTSSRDSSFLLFWSLFPYTFFFEFPFINLLWRHPNPLHLPLDITHSSWQFFLSQ >gi|333032555|gb|GL891871.1| GENE 16 10350 - 11549 1387 399 aa, chain + ## HITS:1 COG:AGc1839 KEGG:ns NR:ns ## COG: AGc1839 COG2814 # Protein_GI_number: 15888343 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 394 36 423 428 278 47.0 1e-74 MASPQSPSSSPRHYSLFLAIFSLAVGGFCIGTTEFVAMGLIQEIAHNLKITVPEAGHFIS AYALGVVIGAPIIAILGAKVPRKTLLLCLMLFYGIANACTALAHTPETVLVSRFIAGLPH GAYFGVGALVAAELAGPSRRASAVAQMMMGLTVATVIGVPLATWLGQHFGWRAGFEFSAT IAFFTLIAVACFVPNIPVQATASIKTELAGLKNINMWLTLAVGAIGFGGMFSVYSYVSPI LTEYTKVNIQIVPIALALWGIGMVIGGLAAGWLADKNLNKTIVGVLISSAIAFVVASFLM SNIYSAIGSLFLIGLTVMGLGGALQTRLMDVAGDAQTLAASLNHSAFNLANALGAFLGGW VLSHQMGWIAPIWVGFVLSLGGLIILLIAFAVEKATQKA >gi|333032555|gb|GL891871.1| GENE 17 11575 - 12573 1085 332 aa, chain - ## HITS:1 COG:MA2034 KEGG:ns NR:ns ## COG: MA2034 COG1226 # Protein_GI_number: 20090882 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Methanosarcina acetivorans str.C2A # 28 263 30 258 279 127 31.0 4e-29 MVQIRMRILAWKTVRRFFYNNLHNHDYETTVSRCINYFLVFLIIGNVVAVLLETVNDLYY SYRIWFDYFENVSIAIFSVEYLLRLWSIVERDSTQAAWKQRFAWMKSGEALIDLMAILPA YLNFFVRIDLRMLRILRLLRLLKLTRYFISLQILLCVIKREKGSFQAVIFILIIMIIMTA SGIYVVENKAQPEAFSSIPKAMWWAVVTLTTVGYGDVTPVTSLGKLLGALITILGVGIAA LPAGILASGLANELNQRNQRLEQEFRELLQVRGIDIMHDEVEIERIRQKVGLPKEQAHNL IIQIMREKVLEEKEAVREKKCYCPHCGEKLTD >gi|333032555|gb|GL891871.1| GENE 18 12697 - 13131 373 144 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001338 NR:ns ## KEGG: ABBFA_001338 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 144 1 144 144 273 100.0 1e-72 MLKTIVEFKFDDYQLYDQNLSAEDGNTLVQKTEDIAQYIYSILKNRYHLNIELNAERWGW EIEVPLPEITMYIGISVYEEYSNGFAIFISPNTPILRRFLFRKLDITHHIMLLQNYINVI LKSHAGIYDVQWWEENEFRYVAAH >gi|333032555|gb|GL891871.1| GENE 19 13360 - 15999 3092 879 aa, chain - ## HITS:1 COG:PA1787 KEGG:ns NR:ns ## COG: PA1787 COG1049 # Protein_GI_number: 15596984 # Func_class: C Energy production and conversion # Function: Aconitase B # Organism: Pseudomonas aeruginosa # 1 865 1 859 869 1335 76.0 0 MLEAYRQHVAERAALGVPPKPLDDAQTAQLVELLKNPPAGEEAFLVDLLENRVPAGVDQA AYVKAAFLAAIAKGEATSPLVSKERAVYLLGTMLGGYNVAPLVELLDDAELGSLAAEALK KTLLVFDAFHDVADKAKAGNANAKAVLQSWADAEWFTSRKDVPEEIKITVFKVTGETNTD DLSPAQDAWSRPDIPLHANAMLKNERDGINPEKPGEVGPLSQIKELIAKGNQVAYVGDVV GTGSSRKSATNSVLWFFGDEIAHIPNKKDGGVCLGGKIAPIFFNTMEDAGALPVEIDVSN MNMGDEVTLKIDHAAAKVTAFKNGEQIAESELKTPVLLDEVRAGGRINLIIGRGLTAKAR EALGLAPSTLFRTPVQPADTGKGFTLAQKMVGRACGLPEGQGIRPGTYCEPKMTTVGSQD TTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVQMQHTLPDFIMNRGGVSLRPG DGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVK FKGKMQPGITLRDLVHAIPYYAIKEGDLTVEKKGKKNIFSGRILEIDLTEMETDLTVEQA FELSDASAERSAAGCAITLSEEKVAEYLRSNITMLKWMISQGYGDARTMARRVENMEKWL ANPSLLKADADAEYTKVYEIDLSEIKEPILCCPNDPDDAKLLSDVQGDKIDEVFIGSCMT NIGHFRAAGQLLEKVPSGSLTTRLWLAPPTRMDEHQLMEEGFYNTYGRAGARTEMPGCSL CMGNQARVAPNTTVVSTSTRNFPNRLGQGSNVYLASAELASVAAVLGKLPTPEEYQQYAA QIDSMSADIYKYLNFDQMGEYTNAADKVDTKKIAAAQLT >gi|333032555|gb|GL891871.1| GENE 20 16258 - 16617 301 119 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02329 NR:ns ## KEGG: ACICU_02329 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 119 1 119 119 226 100.0 2e-58 MKKVLFVLMGMLIVGCTEKKPLTPEEQWHGYCTSVGNAARSILFDRQQAIEKSQAIEHAN KIEDEITKKFIFNIIEKVYAIPQDELKTNPEALQEKIRKQMTDECLVTPHDKMPNYKKF >gi|333032555|gb|GL891871.1| GENE 21 16762 - 21267 4866 1501 aa, chain - ## HITS:1 COG:YPO3523 KEGG:ns NR:ns ## COG: YPO3523 COG2911 # Protein_GI_number: 16123669 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 604 1501 426 1305 1305 291 26.0 1e-77 MAEVEQQPTSAPSSPKKRRILRSFLLTILIILLLLVASIIIMMSTDRGSRFLLDRVLQAQ QVIKYEYEGGNLLRGIILKNIIVQLKEVDVTLDRADVRLGWRSLILEKEVHLSNADVRNL VIINKAPPSDKPFEFKPIKLPFVLRVDVGDVDHLEIKNSGSVVNFHDVHLNDALWSETKL KFENSSMDMGYLSVHNATGNMDFSGKYPLNATADLRIPSLKSLNIQNIKVAARGSLDTLQ AGVATTTPDLLTGWVVLHPVRHEVPMQGALLLKNYHLPLLVEQKLFAKNGVIKFQGDIKQ LNLALETDLKGENLPEGQYNALMNTDLVHQLNITDFNGQVMKGAVNLKGLVNWKDHVTWD IKGRLDHVNPKDKAIPQVVQDFLPPSLDAAVSSTGSLEKGTEVFANVDFDRYESWKLKLN QAPEKNKKPQPMFMNVAWANIDRAMPYIGWLSSDSGQVDLTLRDGQQDIKVSTKVYQHEQ TLLPAGQYLATLNVKDNILNVPSFSFAAQKGSLTGQAKVLLPSEKRQLAWNALLNAKDFN PQSIHTAAPVNLLNGSIKASGFAKPNQQIIQLEKIDLKGRLAQAGQEMVALAGKSTAALL FNDVKAGGGFKGFAVNYDGSLKALNQANGLLKFSIAGTPEFIRISQLQHDGVAGKIYATG ALNLKDRIAWDINSSLVRFKPQYFASSVKGEISGNVKTQGIWSDKLKRIDIQQLNLAGYL NNKPVRGKGNLSILMDSNQKGFLPQQFEANNLFLVYAQNQLQATGNAQNLKIKLNAPALY ELYPGLSGRAYGDLSVQSQPRLKATANIAVDNFAFNTLVSIKKLRIQGELPTSETTPTQL TAKLDNLRSGSRQIQSAEVNLTGTRKAHLLKVQGNNNVSKFYVQLAGGFNAKNDWLGQIQ KGSFDSRRIRLAQNQNAPVVFSSARSELYVGQHCWQSTNSQLCLDQPVRVSKAQGNISFV TQNLDLGDFAAFMPEGLAMTGQLNGYAKASWVNGGHPKLDARLVTRKGELGLAAEDPQDP PTTLAYDELSVIAKSISEGLLFRVDVKTPDIGTGYANVIINPYQSSMPMHGEVAFNDVQL KVLKPFIQDVRSMSGTLALAGKVNGTLTQPQFTGEMRLKNGAISMISLPVNLTNVQVYSS IHQDMATIDGAFNSGQGVGLLKGSFDWKNAPRLQLNLKGDNLLVRQAPLITAIANPNLTL DMYPFDKRLSLKGSVDVPRARISMPETTAPVVNTSSDVRIVRQGQDPLAILRAAKPWDIR ADISVNIGNQVIFQGFNSNIPLVGRLNLTQRGYETAMRAMGAIGVSQKVKIEAYGQSLDL NRAIARFNGPLADPTLDIDANKNVQGSMVGVRVTGTASSPNIQVYNDAGLSEQEALNALV TGRINEGASGLSNAEGFKSDVNNTIAAAGISMGLGGTRALTNQIGRTFGLSGLALDAQGT GDDTQVSLTGYITPDLFIRYGVGVFTPVNKLTLRYQMNRRLYLEASQSLERAIDLFYNWR F >gi|333032555|gb|GL891871.1| GENE 22 21294 - 21413 92 39 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001334 NR:ns ## KEGG: ABBFA_001334 # Name: not_defined # Def: surface antigen family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 39 868 906 906 90 97.0 3e-17 MGVGIRWKSPIGPIRLDVASGISDDNHPIRLHFFIGPQL >gi|333032555|gb|GL891871.1| GENE 23 21869 - 24151 2318 760 aa, chain - ## HITS:1 COG:YPO3524 KEGG:ns NR:ns ## COG: YPO3524 COG0729 # Protein_GI_number: 16123670 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein # Organism: Yersinia pestis # 233 497 17 258 578 90 25.0 8e-18 MPSKIKFKQSTLSHSMHLILKMQSIPKLICSSLLLSLCVPPCYAQSSAETVTPEANQTVT DSLVQQTNTNNPSDVPITDVATLVTQAQQQQDSLAILQQQEQFPNQIEEFKPITLDNLED LPVMPVDQNMANEIYRVAEEAKNEAQNFQNGTQKQPEMVVNDASQAELHEINQAPVNIDQ LMHEIQSDSKIVVEANETGKTLPELTAAVEEPPEEKGFFRRIFNKIRPPRVIPMEQIPRI TAEVTGAPDDLAKNIKGKLSTFTQESFEDFNAALPQLRSLSNQAAQAVGYYNAEFRFEKL SASRVRVNVTPNEPVRINEQNIEFTGAGAKQPQFQVIRLVPDQDVGDIFNHGLYETTKSR IVDAASDNGYFDAYWRLHDVKVSQPENKADINLKYETGERYKLGKVEFRMSDPSKPLPLN MNILESMAPWKEGDDYAFWRVNVLANNLTNSRYFNYTLVDSIKPDPIEKPLELPPDLQAL VDQQNVDIDESKLLPLEQQQLAKARQLASSSKEVTQNVVDEKQFAGTESVQAAPASLKAA TVQHEEQESEQDRLQAQAREEKRIPVIVTLNADKLNSLETGIGYGTDTGARLRSQYRRSI VNKYGHSFDANLELSQIRQSIDGRYSIPYKHPLNDYFNIVGGYERETRDDIGPDVSLLTE SAVLGGERVIKKPLGNWQHTIGVRYRLDRLTQKGNVDISELPDAFKTAASEQEALLFSYE TSKTSSNTRLNPTKAFKQTYKLELGSESLLSDANMAIATS >gi|333032555|gb|GL891871.1| GENE 24 24341 - 25639 968 432 aa, chain + ## HITS:1 COG:VC1966_1 KEGG:ns NR:ns ## COG: VC1966_1 COG0477 # Protein_GI_number: 15641968 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Vibrio cholerae # 1 419 12 425 429 297 44.0 3e-80 MTSRRFVPMFFTQFFGALNDNVYKQALLLVITYGWIQQQSAPVNTLNNLAALLFILPYFF FSATAGQIADKYERSQLVRGIKILEIIIMLIGSAGFLLGHLWLLLLALFLMGTHSTFFGP IKYAILPEILKPHELMSGNALFQSGTSMAILFGMILGGAVIASSDGNLLWISITVVAIAC IGYLFSRFILPQKVAAPDLDIDWNFVRTSFQTIKYTKSLPLVFTILLGNSWYWFYGATYL TQIPQLTQQNLHASENVVSLLLTFFSVGIGVGSLLCRKIGGSEINIKMVPIGAVGLTVFA LYLAASLAFVPERTGALLTLKDVFTQGWAYYHVMIAVTLLGISGGFYIVPLYAMMQAYSP RSHRARVVAANNILNAVFMVSSAIFSILILSVLKIDIKILFIITAVLSAIFSIWLLARLK PMLATAHLSLED >gi|333032555|gb|GL891871.1| GENE 25 25643 - 26278 890 211 aa, chain + ## HITS:1 COG:PA0655 KEGG:ns NR:ns ## COG: PA0655 COG2941 # Protein_GI_number: 15595852 # Func_class: H Coenzyme transport and metabolism # Function: Ubiquinone biosynthesis protein COQ7 # Organism: Pseudomonas aeruginosa # 2 209 5 213 215 221 55.0 5e-58 MRHYTGIDQLINSFDQALRSLVPGATAAQRQNPAETVEAKLGVEDARHVAGLMRVNHSGE VCAQALYHGQALTAKLPNVRREMQQAAIEEQDHLAWCEDRLKELNSHTSLLNPIWYGLSY GMGALAGIAGDKYSLGFVAETERQVSLHLQDHLNQLPAQDERSRKILEQMNEDELHHRHT ALEAGGVELPYAVKITMTAISKLMTKTSYYL >gi|333032555|gb|GL891871.1| GENE 26 26325 - 26873 608 182 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02335 NR:ns ## KEGG: ACICU_02335 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 182 1 182 182 332 100.0 4e-90 MKNIGLAILAISLSGCAAMSVEECKTANWSLVGEKDGSKGSSPRLDQYYKACGKANIVPD QKSYERGYKEGLGYYCQPANIFYNALEGNGNINVCPVEQRNRLRPYYRAASDYYNAKAEY DRYDEKFKQYSDSAYNEKLKPEERERYRKLLRELQIDRDRINRNYWNSIRDIERFKYDHG LK >gi|333032555|gb|GL891871.1| GENE 27 27281 - 28702 863 473 aa, chain + ## HITS:1 COG:ECs1874 KEGG:ns NR:ns ## COG: ECs1874 COG0174 # Protein_GI_number: 15831128 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Escherichia coli O157:H7 # 23 471 35 493 498 399 45.0 1e-111 MSTHIYPNLNLKDPHFKAFKISDDFIPQTQIHTFNSELFLKEVDEYLSLYPHTQHIDICL HDLNGHIRGKRIDVKSLKNLSNGCYFPLSVYAMSLDGKVIEETGLGKYIGEPDRLCLPIL DSLQPSALSPELNAQLYLSMQEEDGSDCRYEPRNILKKLLNQLHANNYFPVMAAELEFYL FSPQHQFETCSENQCFDIDAPNNYQQVLDEVEKAALLQSIEITAIVAESSPGQYELNLQH SHDILKLCDQINALKRIVKQVARKHDLTACFMAKPNLAKAGSGMHFHMSMLNQYHQNIFS SEEKDELSAKLLSAISGLIELMPASMAILAPNINSYRRFKIGHHVPLEANWDTNNRNVAI RIPCSDVQNQRLEYRVAGADCNPYLVTATILAGASYGLSHKLPLPKPAHLLKFPDEHILL ANNQPEALKIFKGSLILKGYLGADFVEHWYTVKQAEYQNIYSQMTEAEQHWDI >gi|333032555|gb|GL891871.1| GENE 28 28781 - 29497 719 238 aa, chain - ## HITS:1 COG:PA1637 KEGG:ns NR:ns ## COG: PA1637 COG0745 # Protein_GI_number: 15596834 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 7 231 2 227 230 231 54.0 7e-61 MISSETSPVETRIVIIDDEPQIRKFLDIALRTQKYKTTLCETGYKGLEALATQGADLVIL DLGLPDLDGKEVLQELRSWSNVPVIVLSVRADEYEKVALLDAGANDYMTKPFSVQELLAR IRVILRNQPIQQEAHIYDDGYLKVDVTQRLVWIEQQPITLTRKEFQLLTLLMRYQGQLLT QPQLLKELWGPTHQEDTHYLRILVGKLRSKLGDNAIQPRYIATEPGVGLRFLAKQKNH >gi|333032555|gb|GL891871.1| GENE 29 29509 - 32163 2283 884 aa, chain - ## HITS:1 COG:PA1636 KEGG:ns NR:ns ## COG: PA1636 COG2205 # Protein_GI_number: 15596833 # Func_class: T Signal transduction mechanisms # Function: Osmosensitive K+ channel histidine kinase # Organism: Pseudomonas aeruginosa # 8 881 6 874 885 624 41.0 1e-178 MQSNRENQAEALLNHVNRYQAGRLTVFLGAAPGVGKTYAMLARAKELFQQGTDVVVGIVE THGRIETLKILEGLPQIARKEMQYQGHILEEMDLDAILLRHPQIVLVDELAHRNVPNSRH ERRWQDVNELLDAGIDVFTAINIQHLESLNDVVYQITGIRVNETVPDRVFDRIRDIRLID LPVSELIERLHQGKVYVPEQANLALQGFFSISNLTALRELAMQCVAEHVDSDLKESYASK GLKSISLQNELMIAIDGQGSSEYLVRAGCRLAERYGATWTVVNVAKSLDFGQSSGNSYKK EYIEIDRAFELARQLGGRTEILYGHRVASVLMDAAVDRGISNLVIGKSISPWWLKLFKKN LAQQLLNQENSIALTILHPEQGTKKINQLEKPSFLSLKESVFVLAVTCASIFIAHFAEVL FGIEDFSVIFIISVLIVATKTRMLAAVVAALICFLAYNFFFIAPRYTFQISAHQGVVTVV AFFAAALIAGRLASQLRQQVLSLKAANAYTTVMQDLARKLSSAVNLEEVMQTGRMTLETQ LQTKVWISIRDKIISSDIELNDKEKVAAEWCLKHQQPCGRFTDTLSQSNWWFLPLLEQKN SLGIVGIYFKDEVVSLNFEQKKLTESVIEYIAQAALRTQLVNELEQAKVTSETERLRSAL LSSVSHDLRSPLASIIGAADTLANFKAEMTEQDQQDLLETIHLEGERLDRYIQNLLDMTR LGHEGLTLKRDWIGVDELIGSATRRLKRYKPDTQVVVQLPEQSISLYVHPALVEQAIFNV LENAANFSPPDESVMIRAQLSSEDEVKIEIEDKGAGIPEDERHRIFDMFYTIERGDRGKF GTGLGLTIVKAIIGAHMGTIEAFSGRQNKGTLIQIKLPIHPVKE >gi|333032555|gb|GL891871.1| GENE 30 32202 - 32807 722 201 aa, chain - ## HITS:1 COG:MT1060 KEGG:ns NR:ns ## COG: MT1060 COG2156 # Protein_GI_number: 15840461 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, c chain # Organism: Mycobacterium tuberculosis CDC1551 # 14 197 4 189 189 140 43.0 2e-33 MKTYAQNSEANLGQTLRASFGLLIFTLVGCGAVYSAIATGAGQVLFNNQANGSLIEIDHK VLGSKLVAQPFVGEAYFHPRPSAVAYDPMAMAGTNLARTNPELQQQIDAQILAVKKQDHT GNNPIPSDLVTKSGSGIDPHISPESAQLQVARVAQARHLDPKIVEELLQKYVEPKQFDVL GQARVNVLQLNIALDQLQSTH >gi|333032555|gb|GL891871.1| GENE 31 32821 - 34854 2435 677 aa, chain - ## HITS:1 COG:DRB0083 KEGG:ns NR:ns ## COG: DRB0083 COG2216 # Protein_GI_number: 10957402 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity K+ transport system, ATPase chain B # Organism: Deinococcus radiodurans # 23 671 22 670 675 738 64.0 0 MNTQTHVNSHKQTMAVPNFEVWKNAFVKLLPQHAIKNPVMAIVWLGTVVTGISTILGYTT LIFGLVVTAILFITILFANYAEAVAEARGRGQASSLRAARENLTARRLNSLTDRQATQVA ATELHLNDFIEVHAGELVPADGEIVEGFATINESAVTGESAPVLREAGTDRSGVIGGTKV LTDRIVVQVTAESGQSFLDRMIALVEGSNRQKTPNEIALGFLLMVMTITFLIVVISLPFI AKYLHIELDSVVLVALLVCLIPTTIGGLLPAIGIAGMNRALKANVLAKSGKAVEVAGDID VLLLDKTGTITYGDRQATSFYPLTSVTESELRAAAWVSSLADPTPEGKSIVKLAKEQGLK QQEPEQAEFISFSASTRISGVNLPNGEQIRKGALDAILKFVDEDYSQDLELKARVEQVAK KGATPLVVANQHHVLGVIELSDVIKHGIKERFARLREMGIKTVMVTGDNPLTAAAIAAEA GVDDYIAEAKPEDKLACIRTEQQRGRLVAMVGDGTNDAPALAQADIGLAMNSGTQAAKEA GNMVDLDSDPTKLLAVVEIGKQQLITRGALTTFSLANDVSKYFAILPALFAAAIPQMQVL NVMHLASPNSAILSALIFNAIIIPLLIPIALRGVKFKPSTATQLLRRNMLIYGVGGVVLP FIAIKAIDVVIVQLFGL >gi|333032555|gb|GL891871.1| GENE 32 34869 - 36578 1591 569 aa, chain - ## HITS:1 COG:CAC3682 KEGG:ns NR:ns ## COG: CAC3682 COG2060 # Protein_GI_number: 15896914 # Func_class: P Inorganic ion transport and metabolism # Function: K+-transporting ATPase, A chain # Organism: Clostridium acetobutylicum # 1 566 3 557 557 399 39.0 1e-111 MLELILVLFIAIFLAWCLAKYLSKVMTNQPMVGDGLFRWIENPVYRLLGISPQQQMNWKQ YSLAFVVSCVFLAVAVFAIFMTQAWLPLNPNHAPNMSWDLALHTVISFLTNTNQQHYSGQ AQLSYLSQMTGIVGLQVITPMMGLALVVATLRAFFYQRPSHIAADVAEQPDQILIGNYWA DVIRPTVRFLLPLCFVWSLLLNSQGVPATFRGGPEVQLIDKANTVQTQKIPLGPVAPMVA IKQLGSNGGGWYGPNSSVPLENPTPLSNLLEMIAILLIPLTVIFMVGHFTQRKKFAYFVF GSMLFISIISGAAAVWSESMSSTASQLAVMEGKEQRFGPAASAVWAAITTQVNNGSVNMM HDSSAPLTGLVELINMLINAIWGGVGCGLQQFMIYLLLAVFIAGLMTGRTPELFGRKIEA AEIKLLAIIILIQPLVILAFTALSLSIPSISGISNPGPHGISQVFYEYVSAFANNGSGFE GLGDNTVWWNVTCSIALLLGRFPTLILPLMIATRLAAKRKAPETSGSLQVETPTFALTLI TIVVLLTLLQFMPVLVLGPIADQLLLVKG >gi|333032555|gb|GL891871.1| GENE 33 36837 - 37274 310 145 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02342 NR:ns ## KEGG: ACICU_02342 # Name: not_defined # Def: putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3) # Organism: A.baumannii_ACICU # Pathway: Folate biosynthesis [PATH:abc00790]; Metabolic pathways [PATH:abc01100] # 1 145 1 145 145 291 100.0 8e-78 MNAPEIIFALALASNLDAAQHFTFAYTQLATLGKVQFSSVYQIPCRDGIGDDYWNSACLL KSTLSSEQIESFLKKLESDSGRVRPSHHISLDVDLIAWGSDLDHMQFNSKKLPLALDVKI PLYELWDCETLKADSTLYPVVNFKV >gi|333032555|gb|GL891871.1| GENE 34 37231 - 37611 339 126 aa, chain - ## HITS:1 COG:VC0524 KEGG:ns NR:ns ## COG: VC0524 COG1539 # Protein_GI_number: 15640546 # Func_class: H Coenzyme transport and metabolism # Function: Dihydroneopterin aldolase # Organism: Vibrio cholerae # 1 117 13 128 129 77 35.0 5e-15 MDAIIIEGLKVETVIGCFNWERQIIQPLMLDLTIHNDLSRAAASDKLEDTLNYAQICELS AQTIQKAKPELIEHAAHLVLQCLFETFPTIEKITITIRKPAIIAEANAVGIRLERTRNNF CARSSE >gi|333032555|gb|GL891871.1| GENE 35 37627 - 38925 1381 432 aa, chain - ## HITS:1 COG:MT0675 KEGG:ns NR:ns ## COG: MT0675 COG0661 # Protein_GI_number: 15840050 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 14 418 62 467 488 210 31.0 4e-54 MKKNILFDGLRSVARIGETAVVAAKAGIKYATDKPSNAKLMRETFESLGSTYIKLGQFIA STPSLFPREYVEEFQGCLDQTPTLPFSYIQGVLASEFEGRDLSQIFSYIDETPLASASIA QVHAAKLTTGEDVVIKVQKPGVETILYTDLNVVHWAAKLLERAVPKIKFAALSEIVDEIK TRMVREVDFIEEAQNLDDFVEYLNISQNQAATAPKVYHQFSTRRVLTMQRLYGVPLTDFS VVKQYAKDPSQVLITAMNTWFGSLMLCKSFHADLHAGNLMLLEDGRIGFIDFGIVGQLKP EVWTACIAFMDALQKTDYQAMAENMLKMGMTHNKIDVQVLAQDLERLFNGVLMADPQQIL ASNPADLNDIMMDMVAVGERHGIKFPRDFALLFKQMLYFDRFMRVLAPYTDIYADQRLKM VQNMEPASLLKH >gi|333032555|gb|GL891871.1| GENE 36 38984 - 39760 690 258 aa, chain - ## HITS:1 COG:VCA0618 KEGG:ns NR:ns ## COG: VCA0618 COG0476 # Protein_GI_number: 15601376 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Vibrio cholerae # 12 256 6 251 254 187 40.0 1e-47 MTELQDIDFVELSDEEMHLYSRQILLDGWDIEAQEKLKLANVLIVGAGGIGCSSAELLAR AGVGKITLIDADTIEISNLQRQIAFGHEDIGRYKAEVLAKRLQKINPYICVEYFNERLDG HNIDKLVEHQDVVLDGCDNFTTRYLVNAACKKHQVALISASAIGFQAQMFMVEGDSACYE CLFPKEQHANEGLRCAESGVLATTPVMIASLQAHHTLLYLGLNRTPLKQKLLLWDGLNMT QRIVSFDKDINCPLCQAS >gi|333032555|gb|GL891871.1| GENE 37 39930 - 40508 619 192 aa, chain + ## HITS:1 COG:yddH KEGG:ns NR:ns ## COG: yddH COG1853 # Protein_GI_number: 16129421 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Escherichia coli K12 # 2 190 16 204 205 149 40.0 3e-36 MSQSYIAPVELEKAYRLLNHGPTVLVSAQHGDDRNVMAAAWACALEFKPAKVTVVLDKST KTRQLVEQSGYFTLQVPCYAQLNMTKQLGTISKLDDPQKLEHCGVELFYQKDLTSPLVSG CIAWLVCKLIPEPHNQSAHDLFIGSVVGAWADSRVFRDGHWHFQHVPKELRSLHYIAGGT FYLIGEEVKADL >gi|333032555|gb|GL891871.1| GENE 38 40553 - 42196 1583 547 aa, chain - ## HITS:1 COG:PA2555 KEGG:ns NR:ns ## COG: PA2555 COG0365 # Protein_GI_number: 15597751 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pseudomonas aeruginosa # 1 538 1 541 555 671 60.0 0 MKTLAEAYQQFDLTRLIEEQLVGHPQAINAYVECCERYVGKYKTALIWEGKNGQAEHYTF EQLAELSGKLANFFKAQGIQAGDCIAGLLPRTPELLITILATWRIGAIYQPLFTAFEAKS IDHRITTAQTKLIVTNDEQRPKLNTLNVPVIVTVHQTGLLSEHDFDFWQSLQRYSEQCEP VNRSFDDDFLMMFTSGTTGLAKSVPVPLKAILAFKGYMTHAVDLREEDMFWNLADPGWAY GLYYGITGPLSLGHGIIMDERSFNVDQAIELIKKYKVSNLTGSPTAFRMFFGFKEKFDPS IKQHLRVVSSAGEPLTPEVVNWFKQDLEVNIFDQYGQTELGMVIANHHALEHPLKVGSAG FAIPGHRFAVLDQNYQELPTGGVGILAMDSEQSPLMWFKGYGGNNRKAFVGKYYLTGDTV TLNEHGGIDFVGRADNVITTSGYRVGPFDVESTLLECEAVLESAVIGKPDPERTEIVKAF VVLKPAYQACETLKDKLQQYVRNRLSRHAYPKEIEFVDSLPKTTSGKIQRGLLKQQEIAK MQQAYAS >gi|333032555|gb|GL891871.1| GENE 39 42417 - 43553 1177 378 aa, chain - ## HITS:1 COG:AGl2714 KEGG:ns NR:ns ## COG: AGl2714 COG1960 # Protein_GI_number: 15891463 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 375 6 380 380 466 62.0 1e-131 MILNAEQSMVQEMMRNYAQNQLKPTAAHRDKTHEFPAQELKDLGALGAMGMTVPDEWGGA GMDYVSLVLAIEEIAAGDGAISTIVSVQNSLICGITLAYGSEQQKQTYLPKFASGEWLGC FCLTEPHVGSDASAILCKAERDGDHWVLNGVKQFITSGKNAQVALVFAVTDKQAGKKGIS CFLVPTNTQGYLVTRIEDKMGQHASDTATITLEDCRIPLENLVGQEGEGYKIALSNLAAG RIGIAAQSVGMARAAFDAAVQYANERKAFGVELVQHQAVGFRLADMATQIEAAHQLVLHA ATLKDAGLPCLKEASMAKLFASTMAERVCSDAIQIHGGYGYVSDFPVERIYRDVRVSQIY EGASDIQRLVIAREVAQV >gi|333032555|gb|GL891871.1| GENE 40 43572 - 44342 192 256 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 250 4 239 242 78 26 7e-14 MKIQGKHFVITGGGSGLGAATAEYLVKQGASVTLVDMNVEAGEQQAKQLGSKADFVKLDV TDEAAAEQFFKDVLVKHGHLHGLVNCAGIGPSAKVVGREGVHDLGLFAKTLNINVTGTFN MLRFAADAMSKNTVEEGEEDRGVIVNTASVAAFDGQIGQAAYSASKGAIVAMTLPIAREL ARHAIRIMTIAPGIMETPMLKGMPQNVQDALGQMVPYPSRLGKPEEFARLVAHIAENSYL NGEVIRLDGAIRMAAK >gi|333032555|gb|GL891871.1| GENE 41 44509 - 45537 1017 342 aa, chain + ## HITS:1 COG:RSp0653 KEGG:ns NR:ns ## COG: RSp0653 COG2207 # Protein_GI_number: 17548874 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Ralstonia solanacearum # 9 334 55 382 387 277 41.0 2e-74 MVAQSSLSKGTISIALVNEALSVAYAKGLNTQIILNKAGIPAELLMTPKARVPVATYAQL WIELANAMDDEFFGMDSHPMRRGSYKLLTKLVSTAETLEKALYDILKFFNFVLDDIRGEL IREQEKAYLVIHDQEQPKRMFTYATFLMLVHGLMCWLVDQRISLNSIAVRCPKPNDIQDY LVRFCEDIDFNAEINQIEFDAHYLDIKVKKDKKALYDFLEQTPQNLLVRFKNENALSVVI RRHLLKLHPAEWPELKDVAQQLNISEATVQRRLKHEGVSYQQIKNEIRCDIAIERLSKSN DSIQDISEDLNFHDPSAFHRAFKKWTGVSPGAYRDNLTTFKQ >gi|333032555|gb|GL891871.1| GENE 42 45781 - 46755 786 324 aa, chain + ## HITS:1 COG:PA3449 KEGG:ns NR:ns ## COG: PA3449 COG0715 # Protein_GI_number: 15598645 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 34 323 32 323 333 375 62.0 1e-104 MSLKSKFSLPKTLLASTLGFVFASSTFAAIPTTLKLDYAYYAPTSLVVKDQKLLEKALPN TQIKWVFSQGSNRSLEYLNSNSIDFASTAGLAAVLSRANGSPIKTVYVQSQPEWTALVVA KNSPIKSLKDLKGKKIAATKGTDPFLFTLQSLETVGLSKRDVQLVHLQHPDGKTALERGQ VDAWAGLDPLMASAQIQSGAKLLYRNVAFNSYSVLSVKEDFAKQSPEAVEAVIKAYEQAR KWAKANPDKVAALLAQESKLPLPVAKLQLSRTNFDQSIPTATQAQALKRSGKILTEEDLV RKGTNVNQVVDQLLDPRFAQKVVK >gi|333032555|gb|GL891871.1| GENE 43 46759 - 47598 841 279 aa, chain + ## HITS:1 COG:PA3448 KEGG:ns NR:ns ## COG: PA3448 COG0600 # Protein_GI_number: 15598644 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Pseudomonas aeruginosa # 34 277 25 268 274 268 57.0 8e-72 MSDSLNKAELNHFLAQQALKSQKKHLNHKFTRWFKALLIPLIFLAACEFLVRNGYIDAYL LPAPSSLWQSFLDLAHSDLFAHIYISTWRVLFGFIIGSGLGLIFAIWVGLSKEAEAYLEP TFSAIKSIPSLAWIPLLLLWLGIDEGSKITLIAIGAFFPTYTNTVAAIHNVDKKLIEVGK VYRLNAFQRIISIILPAASPGILTGLRNSLSLSWMFMIAAELIAATQGIGYLLSDGRETS RPDIVIIAIILLALLGKITDTLMKLIENWLLRWRDTLQK >gi|333032555|gb|GL891871.1| GENE 44 47601 - 48416 374 271 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 18 268 37 288 294 148 36 6e-35 MNIAQALAIRGEPDSYERQENAWLLEHFLKINSLELKFRLEQELTVQQEQDYLAGLERIQ NGEPLAYVTGSQPFWTLDLKVTSDTLVPRPDTEVLVETVLNLNLPKNANIVDLGTGTGAI ALALASERPDWFVTATDIYAPTLDVAKENAQTHGLHHVKFACGAWFEALEPQQFDLIVSN PPYIDPEDEHMQALATEPRRALVADHHGLADIEIIIAQGKNWLKPQGWIALEHGYDQGQA VRNVFAEHGFSEIKTIQDYGQNDRVTLACWI >gi|333032555|gb|GL891871.1| GENE 45 48416 - 49504 1485 362 aa, chain - ## HITS:1 COG:PA4665 KEGG:ns NR:ns ## COG: PA4665 COG0216 # Protein_GI_number: 15599860 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Pseudomonas aeruginosa # 1 357 1 359 360 449 66.0 1e-126 MKASLRLRLDQLCDRHEELTALLADAEVISDNKRFRKLSREHSDLTEITEVWGKYRQAEE DIETAEMMKSDPDFKDMAEEEIQANKALLEELESQLNILMIPKDPNDSNAAYLEIRAGTG GDEAAIFSGDLFRMYSKYAESQGWRIEVLSENEGEHGGFKEVICRVDGDGVYGRLKFESG AHRVQRVPATESQGRVHTSACTVAILPEIDVDTNVEINPADLRIDTYRASGAGGQHINKT DSAVRITHIPTGTVVECQEERSQHKNKAKAMALLVSRLENAKRAAADAATSEMRRDLVGS GDRSERIRTYNYPQGRMTDHRINLTLYKLDAIMEGDLTELLDSLHREYQADQLAMLAQEN GG >gi|333032555|gb|GL891871.1| GENE 46 49695 - 50513 780 272 aa, chain - ## HITS:1 COG:SMa1969 KEGG:ns NR:ns ## COG: SMa1969 COG0693 # Protein_GI_number: 16263534 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Sinorhizobium meliloti # 2 272 9 279 279 325 61.0 7e-89 MFAMIAASAALSANAAHVLVVLSDEGQLELKNKQVFKTGFYLNELMQPTKMLLDAGHTVT FATPKGKAPTLDESSNNAMYFNQDEKALKQYAGLLHDLKLTSAQDSPVVSLARIEQIGID QFDAIYIPGGHAPMQDLLKDKQLGKVLTAFHKAGKPTALVCHGPIALMSTLPHAAEAVKQ LEQGKKVKTGEWIYKNYQMTVISNQEEEQAKSLLKGGEMKFYPQTALESLGAKYQSNTKA WSPNVVVDRELITGQNPASAVLVGKSLLEKLK >gi|333032555|gb|GL891871.1| GENE 47 50654 - 51556 772 300 aa, chain + ## HITS:1 COG:AGl1152 KEGG:ns NR:ns ## COG: AGl1152 COG0583 # Protein_GI_number: 15890693 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 295 38 333 336 362 55.0 1e-100 MSRQFDHLADVEVFLIVAEKLSISAAAIDLSTTPSVISRTITRLEKKLGIQFFRRTTRHL SLTEAGQLYYEKMQHAFQLIDHAERVVQGEQLQISGKIKLSVPTTYGHYRLPPLLEKFLL KYPDIQIEISISNRNVDLIAEGFDLAIRQGQLPNSTLIARPLEQAPLKLVASPAYLKRMG IPKNLEELKHHQCIAFELPSSGKITPWFLKNDNEEIQWIPTNRILVKEDIVGVVTLAESG LGICQSYDFIVNEKIQQGKLQPILNTYAGHTRPFSLLYAQHKHMSSATRALIDFLCSNDD >gi|333032555|gb|GL891871.1| GENE 48 51754 - 52176 564 140 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1403 NR:ns ## KEGG: ABAYE1403 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 140 2 141 141 132 99.0 3e-30 MKLNALLCSAVLATSMVTVAHADNTTHVAAASALGSIAGTAIGKSMGGTSGATIGAALGG AGGAAVASDRRHRTESAIGGGLGGGAGYTVGKSMGGTNGGYIGAALGAAGGSALGNKISK DRDADRSSKYWKKKHRHHRH >gi|333032555|gb|GL891871.1| GENE 49 52411 - 52708 357 99 aa, chain + ## HITS:1 COG:no KEGG:AOLE_06375 NR:ns ## KEGG: AOLE_06375 # Name: not_defined # Def: 17 kDa surface antigen family protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 99 1 99 171 94 95.0 2e-18 MKMNVWLASALIATTSMVTVAHADNGTRVAATSALGSVVGTAIGKSIGGTSGATIGAALG GAGGAAAASDRRNRTEAAIGGALGGGAGYTVGKNMGGTN Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:21 2011 Seq name: gi|333032554|gb|GL891872.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld112, whole genome shotgun sequence Length of sequence - 805 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 34 - 441 346 ## AB57_2706 hypothetical protein 2 1 Op 2 . + CDS 500 - 803 244 ## COG5556 Uncharacterized conserved protein Predicted protein(s) >gi|333032554|gb|GL891872.1| GENE 1 34 - 441 346 135 aa, chain + ## HITS:1 COG:no KEGG:AB57_2706 NR:ns ## KEGG: AB57_2706 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 135 79 213 213 297 100.0 1e-79 MVLGQCEKVMFNVGGWRKARQEQQMRDWFGFVPTYLITVDASFCERANDTEFCYLLEHEL YHIGVMRDEDGEIVYSDSSGLPKHYLAGHDVEEFIGVVKRYGPSKNVKRLIEVAKNPPFV SNLDISKCCGNCVIN >gi|333032554|gb|GL891872.1| GENE 2 500 - 803 244 101 aa, chain + ## HITS:1 COG:YPO2102 KEGG:ns NR:ns ## COG: YPO2102 COG5556 # Protein_GI_number: 16122341 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 100 1 100 149 97 52.0 8e-21 MATLKEPVKIFIVQSLACRDTPQEVAELVKQEFGVDIDRVQVATYDPTKVAGKNLSKKYV ELFEKTRDEFDKGLIDIPIANKYYRLKQYQRQLEKTRNVKT Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:25 2011 Seq name: gi|333032553|gb|GL891873.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld113, whole genome shotgun sequence Length of sequence - 3766 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 326 - 385 5.5 1 1 Tu 1 . + CDS 482 - 3764 3864 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|333032553|gb|GL891873.1| GENE 1 482 - 3764 3864 1094 aa, chain + ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 168 772 1 650 1291 97 27.0 1e-19 MNKVYKVIWNASIGAWVATSEIAKSKTKTKSKTLNVSAAVLSGVICFAPNAFAGTNTEGG IGQGTSISGTTSCREGSANTANQKDIAIGCGAQTQDRTGSNIANRNNPYNNSTGAYAGAM KQGGAISVGTGAVVEKGLGTAIGSYATTQGISGVAIGTGALSSGNTALAVGRQSAATADF SQAIGNVAAATGKGSLAIGHSATAEGYRSIAIGSPDIENADPVAGQVGAAYQPKMATKAT GKDSIAFGGGAVATEENALAIGAFSESKGKKSVAIGTGAKAQKDNAVVIGDQAEASFEGG VAIGKGARSEAENSIALGKDSKASQATGESYLTKQSAPTGVLSIGDIGTERRIQNVADGA ADSDAATVRQLKAARTHYVSINDNGQQGGNFENDGATGRNAIAVGVNASAAGREAMAIGG SAQAIGSGAIAMGSSSQTVGRGDVAIGRNASTQGAEGVNSNQSVAIGDQTKAIGDQSVAI GADVIAKGNSSVAIGGDDVDKIARDTELSNTYTEITGGTLQAGKYPTTEANHGSTAVGVQ AVGTGAFSSAFGMTSKATGDASSAFGVMSNASGKGAAAFGAVAQATGDGASAMGINSLAS GTNSTAIGSGNKPGEGAKATGNSSAAIGSGAQATGDNSAAIGKGAEATNENAAAVGGGAK ATGKNAAAIGGGAIADQENAVAVGQGAQSLVEGGVALGARSKVEAKNSVALGQDAVATEA TGTSFLTNRDASQSNGVISVGSAGKERRITNVEDGSADSDAVTVRQLKNVDSRVNQNTSN IGKNTQNITNLNQKLDDTKTNLGNQITDTNKNLNDAKKDLGDQITDTNTKLNTTKDQLTT QINDTKTELNNTIGNTKTELNTKIDNTKTELENKGLNFAGNSGADVHRKLGEKLNIVGGA AASTPAAKTSGENIITRTTQDGIQIELLKDSKFDSVTTGNTTLNTNGLTIKEGPSITKQG INAGSKQITNVADGINAKDAVNVDQLTKVKENLNGRITDTNNQLNDAKKDLGNQIADTNK NLNDAKKDLGDQITDTNTKLNTTKDQLTTQINDTKTELNNTIGNTKTELENKGLNFAGNS GSDVHRKLGDKLNI Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:26 2011 Seq name: gi|333032552|gb|GL891874.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld114, whole genome shotgun sequence Length of sequence - 1300 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1227 1045 ## ACICU_01051 hypothetical protein Predicted protein(s) >gi|333032552|gb|GL891874.1| GENE 1 3 - 1227 1045 408 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01051 NR:ns ## KEGG: ACICU_01051 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 408 1 408 425 695 97.0 0 MLPFASGIPNLAPNFSQVQGTAAVSQGGTGATTALDARNNLGAAEKGVNSDITELKGLTK AIAISQGGTGATTPSDARTNLGLGSAATRNVGTTAGNLIEVGGFGIGGVGQTFERKMITG VNLDSVVSYVLLFPYSVRSSPNRNMFGELVFSRGDSGSANQHSRTLVSIQQAYDRVTARF ISIGVTTHISGMAVVKYQNVDYVAIRRTASSSTSAFRYFSGISNITSDNYLVTVHTDDVV IVSEIPVVIEQLRTSANTSVDSNGFIKAASPVVKLFNDHIELNNDAEKQPIEFKKVDVGD YLLKGSLGFAQEGWYIEVPKDANGNTIVAVVYDTLENGDISIKTYKRKFDFELAAVVADH ENPMDIPEGRWIDIRLHEEPEPEPEVEETLSETPVDFQPTNLSQAVAA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:32 2011 Seq name: gi|333032551|gb|GL891875.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld115, whole genome shotgun sequence Length of sequence - 1334 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 762 594 ## A1S_2022 putative tail fiber 2 1 Op 2 . - CDS 840 - 1193 297 ## ACICU_01050 hypothetical protein - Prom 1229 - 1288 2.6 Predicted protein(s) >gi|333032551|gb|GL891875.1| GENE 1 3 - 762 594 253 aa, chain - ## HITS:1 COG:no KEGG:A1S_2022 NR:ns ## KEGG: A1S_2022 # Name: not_defined # Def: putative tail fiber # Organism: A.baumannii # Pathway: not_defined # 1 253 1 263 366 205 52.0 1e-51 MLPFASGIPNLNPNFSQVQGTAAISQGGTGATTAAEARNNLGAAEKGVNTDITEMKGLAT PLSVAQGGTGASSTAGARLVLGLGDIGTSGFFGSKISELYDKVSVPQWIAVLGDNKFAFI SNGDWQGGNVNNPLNMPNRYGSLMSYLGSNSYGTYSWQFFKGVHGHQMSYRYGAGSDAWS AWGHFKTSFNTSVDANGFLKSASPVVKLFKDHIELNSDAEKQPIEFKKVDVGDYLLKGSL GFAQEGWYIEVPK >gi|333032551|gb|GL891875.1| GENE 2 840 - 1193 297 117 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01050 NR:ns ## KEGG: ACICU_01050 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 117 1 117 117 211 94.0 6e-54 MSNHVFKRGDTFNLNLQLVDMDETLQYPPDDIRRAIDLTGYTFTSQIKALADGAAVATLT CAALNQSTQKGWLNIKSGASTAAWPLGLCQMDIKAVVSGNTQHTETLTFQVIDGVTA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:43 2011 Seq name: gi|333032550|gb|GL891876.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld117, whole genome shotgun sequence Length of sequence - 10252 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 8, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 517 216 ## ACICU_00827 hypothetical protein + Term 534 - 574 7.7 - Term 521 - 562 7.9 2 2 Tu 1 . - CDS 573 - 1193 474 ## COG1280 Putative threonine efflux protein - Prom 1263 - 1322 7.6 - Term 1297 - 1323 -1.0 3 3 Tu 1 . - CDS 1343 - 4375 3680 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Prom 4557 - 4616 7.6 4 4 Tu 1 1/0.500 + CDS 4645 - 5592 727 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 5699 - 5765 31.6 + Prom 5673 - 5732 80.4 5 5 Op 1 3/0.000 + CDS 5852 - 6583 557 ## COG2360 Leu/Phe-tRNA-protein transferase 6 5 Op 2 . + CDS 6602 - 7417 682 ## COG2935 Putative arginyl-tRNA:protein arginylyltransferase + Term 7425 - 7469 9.2 - Term 7407 - 7458 6.2 7 6 Tu 1 . - CDS 7462 - 7917 776 ## PROTEIN SUPPORTED gi|169796947|ref|YP_001714740.1| ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18) - Prom 7947 - 8006 7.5 - Term 7975 - 8013 6.5 8 7 Tu 1 . - CDS 8026 - 8901 1047 ## COG3687 Predicted metal-dependent hydrolase - Prom 8960 - 9019 5.9 - Term 9085 - 9125 5.2 9 8 Tu 1 . - CDS 9138 - 10019 1003 ## COG3687 Predicted metal-dependent hydrolase - Prom 10076 - 10135 6.6 Predicted protein(s) >gi|333032550|gb|GL891876.1| GENE 1 2 - 517 216 171 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00827 NR:ns ## KEGG: ACICU_00827 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 54 171 1 118 118 181 100.0 1e-44 IKSNQIKSNHIENLKVISVNKFIFLSLISFGLYPIWWMFKAWRFFLIKDKLNIMPAARAI FSIFFLYSLFNRIKTYAKEQGYINDFSSGWMYLGYLITSLLVRLPDPYWLISLCSIIFLI PAFKALNYAQKQIETTIKQEKFNTPQIILIIIGSIMWLLILFSFVILFLYK >gi|333032550|gb|GL891876.1| GENE 2 573 - 1193 474 206 aa, chain - ## HITS:1 COG:ECs4753 KEGG:ns NR:ns ## COG: ECs4753 COG1280 # Protein_GI_number: 15834007 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Escherichia coli O157:H7 # 1 206 1 206 206 207 55.0 9e-54 MLVALITLAFIHFCALITPGPDFFLVSQTAVSRSRKEAMLVVAGITAGVMFWASLALMGL NIIFEKMAWLKQGLLIAGGLYLCWLGYQMLRSAFSKNQQEEVTTVELPKAPYLFFMKGLL TNLSNPKAVIYFGSVFSLFLANPQLDQVHWLLFIIVSVETILWFCFVTFIFSLPSFRAAY RNFSKWIDGISGGIFTVFGIFLIGNR >gi|333032550|gb|GL891876.1| GENE 3 1343 - 4375 3680 1010 aa, chain - ## HITS:1 COG:VC1903 KEGG:ns NR:ns ## COG: VC1903 COG1674 # Protein_GI_number: 15641905 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Vibrio cholerae # 9 1009 27 953 960 560 38.0 1e-159 MTAVSSVYAQRLLMTLFLVSFGIYMFLATVTYTPFDPGWMHISSDTQQVSNASGIAGAWI ADLLFGFLGWASLLIPIFLFVEAIQVWWPHSFLNRPFRYAAQFFLILVVSSLLYLHWNVP ADTLDNAAGGIIGYELGQSLSQLLTIYGATLFLLVFGVVLFTLAFGVQWSKTWVTLKAMP GYLQDLFYKNVSPNESAYDLTTQPANKAATVKVAEMPKAEEVTDEVELNAQPEKAQSKAS STRHDEIAERLFADVLAKEQSQPETIEEKPTPQPENFERTLEQAQQLKKDSERLVATGEV WRALQRDDVSHKQEIDALLRAADDSSEQPSTHEQFQQTVYQAKQNQPSDTHQGLDWNDDE IFDELLAAVPNSKTATDVHTPFVQDHHVEPEVTPQASQTLVESSVPVTNLNQSPKNLSNE EVFDDFDDLLIDEDIPPATQPIKASSYAQSSAFVKAPIQTTIGAEKLSKEEFIEAWQETA GKPQDDLEDEFDFDAPLTDASGRPMSRAMQVAKKRLDLPTLPGFELLDKVDPNKKVNFTE EQLSRLSELLEIKLQEFNVKAQVVEAQPGPVVTRFELDLAPGVKASKVTNISRDLARSMS MASVRVVEVIPGKPYIGIEVPNSAREMVRLIELLETPAYRDPSALISMAMGKDISGNPVL TDLAKAPHMLVAGTTGSGKSVAVNSMILSMLLKYTPDQLRLILIDPKQLELANYNDIPHL LTPVVTDMKDAVSALNWCVNEMERRYKLMSFLKIRKLSDYNRKVEEALANGEDLIDPTWK PSDSATQERAPRLTPLPSIVIVADEFADMIMQVGKKAEEMITRLAQKSRAAGIHLLLATQ RPSVDVITGLIKANIPTRVALRVNSKIDSRTILDAGGAEDLLGHGDMLFLGPGKIEPERV HGAFISDDEVNRICDAWRERGEPDYVDEILTPFDEEPASRGFEEGDGGSDRDALYDQCVS FVLETRKASTSSLQRKFSLGYNRAARIIDQMEENGIVSAMGANGKRDILV >gi|333032550|gb|GL891876.1| GENE 4 4645 - 5592 727 315 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 9 315 5 306 306 284 49 2e-76 MSARHSRLIILGSGPAGYSAAVYAARANLKPTLIAGLQLGGQLTTTTEVDNWPGDPEGLT GPVLMDRMQAHAERFGTELVYDHINEVDLNVRPFVLKGDMDEYTCDALIIATGATAQYLG LESEQKFMGQGVSACATCDGFFYKNQNVMVVGGGNTAVEEALYLSNIAEHVTLVHRRDSL RSEKILQDHLFAKEKEGKISIVWNHEVEEVLGDNTGVTGVRLKSTKDDSKQEVQVQGLFI AIGHKPNTSMFEGQLNLRDGYIQVQSGTSGNATATSVAGVFAAGDVADSIYRQAITSAGS GCMAALDAEKYLDNL >gi|333032550|gb|GL891876.1| GENE 5 5852 - 6583 557 243 aa, chain + ## HITS:1 COG:PA2617 KEGG:ns NR:ns ## COG: PA2617 COG2360 # Protein_GI_number: 15597813 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Leu/Phe-tRNA-protein transferase # Organism: Pseudomonas aeruginosa # 4 212 5 213 226 187 41.0 2e-47 MKTLPLSQYIFPDPEESDPDGHGLICIGADLSPSTLYEAYTHGLFPWFNEDEPICWWSPE PRCIIYPQNYKPSKSLIRNMKKYDYTITVNRAFEQVIRSCSLPRSYANETWISEDIIEGY CGMFDAGYGYSVEVWQEEQLVGGLYGVTIGKGCFGESMFSTQTDVSKMAFYTLMLIGQEN QLPWVDCQLVNSHLISLGACTLSRQEYLKSLQDVIIHPSINWKKYQERVFSSKTIALNAK LME >gi|333032550|gb|GL891876.1| GENE 6 6602 - 7417 682 271 aa, chain + ## HITS:1 COG:PA2618 KEGG:ns NR:ns ## COG: PA2618 COG2935 # Protein_GI_number: 15597814 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Putative arginyl-tRNA:protein arginylyltransferase # Organism: Pseudomonas aeruginosa # 10 238 4 231 235 232 49.0 5e-61 MKSYHPKSLLNDLQYYITPPHDCSYLENKSARMVFLDPIHRIDVVTLSELSRLGFRRSGD FVYRPECHLCRQCLSCRVPVADFQMNSMQKKAWKRNQDLTMTVLPTRQASQIHYDLYERY INERHADGDMFPPSLDQFEKFLVHSCTDSFFLELWKDNRLISVSTCDLMDDGLSAVYTFF DPDEHRRSLGVYSILNQIEYVKTLGLEYVYLGYWVPHSAKMNYKSQYTPLELLLDGQWRR LNRSLSPEEINQLGNSLMTTLPSEWNNLIIK >gi|333032550|gb|GL891876.1| GENE 7 7462 - 7917 776 151 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169796947|ref|YP_001714740.1| ribosomal-protein-alanine acetyltransferase (acetylating enzyme for N-terminal of ribosomal protein S18) [Acinetobacter baumannii AYE] # 1 151 1 151 151 303 100 3e-82 MIRTMQASDIDSVAQIEKLVQTHPWSRQQFVESLNSYQCTVIELNNKVVGFCILQPVLDE ANLLLMAIDPQMQGKGLGYQLLDASIERLENHPVQIFLEVRESNKAAIGLYEKTGFHQID VRRNYYPTQEGGRENAVIMVKSCTDDFASLF >gi|333032550|gb|GL891876.1| GENE 8 8026 - 8901 1047 291 aa, chain - ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 13 291 12 276 278 243 46.0 5e-64 MNAKVNISNRAGASFPVRRMDFEFAQVPRYWANYDAGLTHFMTALSALFPEGEQFFVNST RAVRNDPKLADPALQKEISAFIGQEAMHSKEHLAFNASAQAYGYDVRKMEKQTGKVIKVG TAVVTKLMKPFGYTKEMIDLTGTCALEHFTSTIAAELLQNPEIQAMFQDDTMYHLWMWHA VEENEHKAVAFDVYTNMYGQGPKAYFMRSTALIIAMALIFATQSYFTAKLLKTDDKLTWK DTKYMLKFMYGRKGFMTRQIPELLDFLRPKFHPNDSDTTALLATWREKLGL >gi|333032550|gb|GL891876.1| GENE 9 9138 - 10019 1003 293 aa, chain - ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 13 293 12 276 278 208 41.0 9e-54 MNAKVNITNRAGASFPVRRMNFDFNDVPEYWMNGSAGLTHFMTALSALFPAGEKFFIDSV RAVRYHPAIKDNEELQKEISAFIGQEAMHTQEHVNFNASAQKFGHDVETLEKFTDTAIQT ARKTFAKLVKPFGMTQEMVDLTATTALEHFTATIASQLLVNTYIQELMTDKTMSTMWYWH AIEENEHKAVAFDVYEGVFGKGVKAYALRTSSLVFAMALIFAIQSSFVVRLLKQDHKLNL DELFVIYKYGYSPSKGIITGMAKEMLAYFKPGFHPNDLDTVSLLKTWKSKLGL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:00:48 2011 Seq name: gi|333032549|gb|GL891877.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld118, whole genome shotgun sequence Length of sequence - 2070 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 1, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 3 - 239 154 ## ABSDF1320 putative repressor protein from bacteriophage 2 1 Op 2 . + CDS 254 - 469 176 ## ABAYE2748 hypothetical protein 3 1 Op 3 . + CDS 521 - 1528 642 ## ACICU_01010 hypothetical protein 4 1 Op 4 . + CDS 1530 - 2033 329 ## ACICU_01009 hypothetical protein Predicted protein(s) >gi|333032549|gb|GL891877.1| GENE 1 3 - 239 154 78 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1320 NR:ns ## KEGG: ABSDF1320 # Name: not_defined # Def: putative repressor protein from bacteriophage # Organism: A.baumannii_SDF # Pathway: not_defined # 1 78 177 254 254 172 100.0 3e-42 VVCDPDADLVPNEFVQVCLKDGRCTIKEFVGINGGVLSLLSVNGGERFFFEMDEVESITA ITDIVPPSQHRQEHPYSH >gi|333032549|gb|GL891877.1| GENE 2 254 - 469 176 71 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2748 NR:ns ## KEGG: ABAYE2748 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 71 1 71 71 114 100.0 1e-24 MDNSKRPINQIIARINDAAKHGEALVLTAEEVKILSKDIGDKVFIPVLTNEQVVQLVKEG KLGQKINNTKD >gi|333032549|gb|GL891877.1| GENE 3 521 - 1528 642 335 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01010 NR:ns ## KEGG: ACICU_01010 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 335 1 335 335 607 100.0 1e-172 MSKTVVKDKTVHYKKVDFLKGANLGQLLKAQLLDKDSFYYKAINRQQFVSATKDDFILIN HASSHQSMFFGELIIVESGKAQAVLKIDSDDATEFPIKTYLTDDLPDDEDGVDATEVVRK EFIDSVLYFGVIDNHVAIIQSRSLTARTLESYLGWLLGEAAKALPENSALILKDAPNPTV KQKLESTPAKTISISSGIGSTELQPVHTVESSIPAKIDYKIEDNVVDVLKSAFGVDLENL KLEDGLDDANLKLKLTLTYNRKTSKSGQKVIDTVASSMRHNDDYVITLEDGTKVTADNLK MSGKISVETINNKVYNDGLKVQLYNWMTTNINFGD >gi|333032549|gb|GL891877.1| GENE 4 1530 - 2033 329 167 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01009 NR:ns ## KEGG: ACICU_01009 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 167 1 167 167 251 100.0 1e-65 MAKRYLPFYNNARFIALVLVGLFAIFSIIFKYLELNITINLVQFSFVLLLPLSQIYLAYK GMLDALKLDGLNQSERDRLTSTVDIRSKSSLYVAMLFIILVFSMYILNLLGLLSAKHLLA LILSVGLTSIFSFFLAWSDLREISLLEKTLKDRKESREAKAKVLSNK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:01:45 2011 Seq name: gi|333032548|gb|GL891878.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld119, whole genome shotgun sequence Length of sequence - 160739 bp Number of predicted genes - 151, with homology - 150 Number of transcription units - 82, operones - 33 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 13 - 456 194 ## ABBFA_001900 hypothetical protein 2 1 Op 2 . - CDS 506 - 2014 1266 ## COG2072 Predicted flavoprotein involved in K+ transport - Prom 2077 - 2136 5.5 + Prom 2059 - 2118 4.1 3 2 Tu 1 . + CDS 2175 - 3194 836 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 3221 - 3259 -0.1 4 3 Tu 1 . - CDS 3210 - 3311 68 ## - Prom 3486 - 3545 4.1 + Prom 3197 - 3256 4.1 5 4 Tu 1 . + CDS 3278 - 4420 1225 ## COG1485 Predicted ATPase + Term 4436 - 4469 2.1 + Prom 4695 - 4754 6.0 6 5 Tu 1 . + CDS 4790 - 6955 2602 ## COG2225 Malate synthase + Term 6969 - 7009 5.1 + Prom 6958 - 7017 8.6 7 6 Tu 1 . + CDS 7058 - 7507 337 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 7500 - 7536 3.2 8 7 Op 1 2/0.160 - CDS 7574 - 7987 531 ## COG0848 Biopolymer transport protein 9 7 Op 2 30/0.000 - CDS 8007 - 8429 525 ## COG0848 Biopolymer transport protein 10 7 Op 3 . - CDS 8445 - 9323 915 ## COG0811 Biopolymer transport proteins 11 7 Op 4 . - CDS 9367 - 10083 605 ## ABAYE2047 TonB protein - Prom 10103 - 10162 2.4 12 8 Tu 1 . - CDS 10193 - 12862 2260 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 13040 - 13099 6.5 + Prom 13447 - 13506 2.8 13 9 Op 1 3/0.120 + CDS 13638 - 15428 1575 ## COG0747 ABC-type dipeptide transport system, periplasmic component 14 9 Op 2 . + CDS 15447 - 17267 1409 ## COG0747 ABC-type dipeptide transport system, periplasmic component 15 9 Op 3 . + CDS 17268 - 19301 2137 ## COG0339 Zn-dependent oligopeptidases 16 9 Op 4 49/0.000 + CDS 19314 - 20252 1024 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 17 9 Op 5 13/0.000 + CDS 20260 - 21402 1134 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 18 9 Op 6 . + CDS 21415 - 23145 683 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 19 9 Op 7 . + CDS 23178 - 23912 522 ## COG2135 Uncharacterized conserved protein + Term 23927 - 23969 9.8 - Term 23736 - 23773 3.1 20 10 Tu 1 . - CDS 23966 - 24334 503 ## ABBFA_001882 hypothetical protein - Prom 24495 - 24554 6.3 + Prom 24538 - 24597 5.0 21 11 Op 1 . + CDS 24644 - 25501 732 ## COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 22 11 Op 2 . + CDS 25559 - 26293 750 ## ABAYE2036 hypothetical protein + Term 26445 - 26481 1.2 - Term 26295 - 26343 9.2 23 12 Tu 1 . - CDS 26350 - 26616 427 ## PROTEIN SUPPORTED gi|126641662|ref|YP_001084646.1| 30S ribosomal protein S20 - Prom 26742 - 26801 5.1 + Prom 26745 - 26804 3.4 24 13 Op 1 . + CDS 26829 - 27494 586 ## COG0702 Predicted nucleoside-diphosphate-sugar epimerases 25 13 Op 2 . + CDS 27507 - 28013 720 ## COG0684 Demethylmenaquinone methyltransferase 26 13 Op 3 . + CDS 28037 - 28816 702 ## ACICU_01647 hypothetical protein + Term 28851 - 28880 -0.2 + Prom 28848 - 28907 2.4 27 14 Op 1 . + CDS 28961 - 29902 1067 ## COG2837 Predicted iron-dependent peroxidase + Term 29926 - 29962 4.2 + Prom 29904 - 29963 2.8 28 14 Op 2 . + CDS 29983 - 30339 310 ## ACICU_01649 hypothetical protein + Prom 30388 - 30447 5.0 29 15 Tu 1 . + CDS 30474 - 33935 3460 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Term 33991 - 34053 14.2 + Prom 33986 - 34045 4.1 30 16 Op 1 . + CDS 34136 - 34570 422 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 31 16 Op 2 . + CDS 34623 - 36092 598 ## PROTEIN SUPPORTED gi|90020820|ref|YP_526647.1| ribosomal protein L19 + Term 36099 - 36148 4.1 - Term 36090 - 36131 7.2 32 17 Op 1 13/0.000 - CDS 36139 - 36477 435 ## COG0633 Ferredoxin 33 17 Op 2 11/0.000 - CDS 36496 - 38355 2170 ## COG0443 Molecular chaperone 34 17 Op 3 10/0.000 - CDS 38394 - 38912 668 ## COG1076 DnaJ-domain-containing proteins 1 - Prom 38935 - 38994 5.0 - Term 38929 - 38977 8.6 35 18 Op 1 14/0.000 - CDS 38998 - 39318 422 ## COG0316 Uncharacterized conserved protein 36 18 Op 2 20/0.000 - CDS 39349 - 39735 521 ## COG0822 NifU homolog involved in Fe-S cluster formation 37 18 Op 3 13/0.000 - CDS 39802 - 41019 1610 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 38 18 Op 4 . - CDS 41021 - 41494 521 ## COG1959 Predicted transcriptional regulator - Prom 41521 - 41580 8.0 39 19 Tu 1 . - CDS 41605 - 42252 525 ## ACICU_01661 hypothetical protein - Prom 42391 - 42450 3.2 40 20 Tu 1 . + CDS 42463 - 42918 446 ## ABAYE2018 poly(hydroxyalcanoate) granule associated protein + Prom 42989 - 43048 3.9 41 21 Op 1 9/0.000 + CDS 43088 - 43360 428 ## COG0776 Bacterial nucleoid DNA-binding protein + Term 43379 - 43408 1.1 + Prom 43411 - 43470 6.4 42 21 Op 2 . + CDS 43492 - 45357 1945 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 45369 - 45409 8.1 43 22 Tu 1 . - CDS 45397 - 46362 891 ## COG2207 AraC-type DNA-binding domain-containing proteins + Prom 46243 - 46302 6.2 44 23 Tu 1 . + CDS 46534 - 47757 1497 ## ACICU_01666 terminal alkane-1-monooxygenase (EC:1.14.15.3) + Term 47783 - 47824 9.0 - Term 47832 - 47869 6.4 45 24 Op 1 12/0.000 - CDS 47877 - 49082 1459 ## COG1960 Acyl-CoA dehydrogenases 46 24 Op 2 . - CDS 49104 - 50396 1245 ## COG1960 Acyl-CoA dehydrogenases - Prom 50496 - 50555 7.7 47 25 Tu 1 . - CDS 50617 - 51990 1552 ## COG0661 Predicted unusual protein kinase - Prom 52156 - 52215 5.6 48 26 Tu 1 . - CDS 52227 - 52505 273 ## ABBFA_001854 hypothetical protein - Prom 52653 - 52712 7.2 + Prom 52637 - 52696 7.0 49 27 Tu 1 . + CDS 52720 - 53184 465 ## COG2606 Uncharacterized conserved protein + Prom 53368 - 53427 9.9 50 28 Op 1 3/0.120 + CDS 53557 - 55341 1232 ## COG4264 Siderophore synthetase component 51 28 Op 2 2/0.160 + CDS 55334 - 56767 963 ## COG3486 Lysine/ornithine N-monooxygenase 52 28 Op 3 4/0.040 + CDS 56788 - 58227 923 ## COG0477 Permeases of the major facilitator superfamily 53 28 Op 4 2/0.160 + CDS 58239 - 60080 1657 ## COG4264 Siderophore synthetase component 54 28 Op 5 . + CDS 60090 - 62000 1171 ## COG4264 Siderophore synthetase component 55 28 Op 6 . + CDS 62013 - 62783 325 ## ACICU_01677 hypothetical protein 56 28 Op 7 . + CDS 62770 - 63387 438 ## COG0684 Demethylmenaquinone methyltransferase + Prom 63405 - 63464 2.2 57 29 Op 1 . + CDS 63551 - 65791 1996 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 65806 - 65844 4.6 58 29 Op 2 . + CDS 65876 - 66169 115 ## ABAYE2000 hypothetical protein 59 29 Op 3 . + CDS 66170 - 67693 1006 ## COG3182 Uncharacterized iron-regulated membrane protein 60 29 Op 4 . + CDS 67690 - 68028 90 ## ACICU_01682 hypothetical protein + Prom 68072 - 68131 9.2 61 30 Tu 1 . + CDS 68163 - 68783 636 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins + Prom 68995 - 69054 6.5 62 31 Tu 1 . + CDS 69115 - 71262 1877 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 71267 - 71326 3.3 63 32 Op 1 . + CDS 71367 - 71993 359 ## ACICU_01685 hypothetical protein 64 32 Op 2 2/0.160 + CDS 71981 - 72499 409 ## COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 65 32 Op 3 2/0.160 + CDS 72502 - 73557 1164 ## COG2038 NaMN:DMB phosphoribosyltransferase 66 32 Op 4 . + CDS 73550 - 74149 531 ## COG0406 Fructose-2,6-bisphosphatase + Term 74225 - 74260 -0.9 + Prom 74151 - 74210 5.8 67 33 Tu 1 . + CDS 74274 - 75842 1518 ## ACICU_01689 hypothetical protein + Term 75867 - 75904 4.0 + Prom 75856 - 75915 9.2 68 34 Tu 1 . + CDS 75949 - 76692 480 ## COG0368 Cobalamin-5-phosphate synthase + Term 76723 - 76755 2.3 - Term 76710 - 76741 2.1 69 35 Op 1 . - CDS 76768 - 77910 1256 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 70 35 Op 2 . - CDS 77974 - 78858 920 ## COG0730 Predicted permeases - Prom 78891 - 78950 3.9 - Term 78938 - 78975 1.5 71 36 Op 1 . - CDS 78991 - 79290 100 ## ABAYE1987 hypothetical protein 72 36 Op 2 . - CDS 79290 - 80846 1160 ## COG3182 Uncharacterized iron-regulated membrane protein 73 36 Op 3 . - CDS 80839 - 81114 192 ## ACICU_01695 hypothetical protein - Prom 81140 - 81199 8.0 - Term 81159 - 81193 6.0 74 37 Tu 1 . - CDS 81201 - 83366 2227 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 83412 - 83471 4.7 + Prom 83348 - 83407 9.7 75 38 Tu 1 . + CDS 83558 - 84733 1241 ## COG0763 Lipid A disaccharide synthetase 76 39 Tu 1 . - CDS 84730 - 85377 536 ## ACICU_01698 TetR family transcriptional regulator - Prom 85400 - 85459 8.5 + Prom 85389 - 85448 7.7 77 40 Op 1 10/0.000 + CDS 85496 - 86518 1228 ## COG0845 Membrane-fusion protein 78 40 Op 2 45/0.000 + CDS 86511 - 88268 365 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 79 40 Op 3 22/0.000 + CDS 88279 - 89403 736 ## COG0842 ABC-type multidrug transport system, permease component 80 40 Op 4 . + CDS 89408 - 90526 770 ## COG0842 ABC-type multidrug transport system, permease component - Term 90531 - 90560 0.5 81 41 Tu 1 . - CDS 90575 - 91444 935 ## ABAYE1982 hypothetical protein + Prom 91404 - 91463 4.8 82 42 Op 1 . + CDS 91484 - 91945 397 ## ABBFA_001826 hypothetical protein + Prom 91963 - 92022 7.3 83 42 Op 2 . + CDS 92045 - 92635 929 ## COG3753 Uncharacterized protein conserved in bacteria + Term 92654 - 92687 3.1 - Term 92634 - 92683 -0.3 84 43 Tu 1 . - CDS 92739 - 93845 1289 ## ABBFA_001824 outer membrane porin protein precursor - Prom 94032 - 94091 7.5 - Term 94050 - 94091 4.9 85 44 Op 1 . - CDS 94100 - 94513 531 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 86 44 Op 2 . - CDS 94532 - 94801 303 ## ABBFA_001822 hypothetical protein - Prom 94902 - 94961 9.9 + Prom 94936 - 94995 15.4 87 45 Op 1 . + CDS 95066 - 95491 206 ## COG3791 Uncharacterized conserved protein + Prom 95496 - 95555 5.8 88 45 Op 2 . + CDS 95622 - 95822 329 ## ABBFA_001820 hypothetical protein + Term 95934 - 95977 5.0 + Prom 96238 - 96297 8.4 89 46 Tu 1 . + CDS 96321 - 96545 216 ## ACICU_01711 hypothetical protein + Prom 96555 - 96614 7.7 90 47 Op 1 . + CDS 96724 - 97098 286 ## ACICU_01712 hypothetical protein + Term 97133 - 97159 -1.0 + Prom 97140 - 97199 7.4 91 47 Op 2 . + CDS 97273 - 98040 742 ## COG0500 SAM-dependent methyltransferases + Term 98088 - 98118 1.0 - Term 98065 - 98111 4.5 92 48 Tu 1 . - CDS 98121 - 99206 872 ## COG3243 Poly(3-hydroxyalkanoate) synthetase - Prom 99292 - 99351 3.9 + Prom 99174 - 99233 1.8 93 49 Tu 1 . + CDS 99316 - 100527 1381 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Term 100539 - 100602 5.6 + Prom 100611 - 100670 6.8 94 50 Tu 1 . + CDS 100705 - 100941 355 ## ABBFA_001814 hypothetical protein + Term 101145 - 101189 1.7 + Prom 101014 - 101073 4.9 95 51 Op 1 23/0.000 + CDS 101207 - 101536 490 ## COG0718 Uncharacterized protein conserved in bacteria 96 51 Op 2 . + CDS 101546 - 102142 609 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 102149 - 102197 3.1 + Prom 102260 - 102319 7.9 97 52 Tu 1 . + CDS 102448 - 103572 1160 ## COG0349 Ribonuclease D + Term 103688 - 103732 4.1 + Prom 103992 - 104051 11.8 98 53 Tu 1 . + CDS 104075 - 104341 316 ## ACICU_01721 hypothetical protein + Term 104354 - 104397 3.1 + Prom 104346 - 104405 7.8 99 54 Tu 1 . + CDS 104478 - 104813 284 ## ACICU_01722 hypothetical protein + Term 104828 - 104893 3.0 - Term 104827 - 104872 8.5 100 55 Tu 1 . - CDS 104886 - 105050 299 ## ABBFA_001808 hypothetical protein - Prom 105263 - 105322 10.4 + Prom 105206 - 105265 13.3 101 56 Op 1 . + CDS 105493 - 105798 387 ## COG3100 Uncharacterized protein conserved in bacteria 102 56 Op 2 . + CDS 105791 - 106177 349 ## ABBFA_001806 hypothetical protein 103 56 Op 3 1/0.240 + CDS 106207 - 107058 898 ## COG0714 MoxR-like ATPases 104 56 Op 4 . + CDS 107074 - 108261 1367 ## COG3825 Uncharacterized protein conserved in bacteria 105 56 Op 5 . + CDS 108298 - 109503 1341 ## COG0133 Tryptophan synthase beta chain + Term 109515 - 109562 2.2 + Prom 109509 - 109568 9.6 106 57 Op 1 3/0.120 + CDS 109740 - 110744 1712 ## PROTEIN SUPPORTED gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase 107 57 Op 2 . + CDS 110757 - 111848 1445 ## COG0082 Chorismate synthase + Term 111869 - 111917 8.6 - Term 111861 - 111898 4.0 108 58 Tu 1 . - CDS 111945 - 113174 1207 ## COG2199 FOG: GGDEF domain - Prom 113408 - 113467 5.5 + Prom 113391 - 113450 4.8 109 59 Tu 1 . + CDS 113495 - 114247 718 ## COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C + Term 114256 - 114305 9.2 - Term 114249 - 114286 5.3 110 60 Op 1 . - CDS 114294 - 115433 837 ## ACICU_01733 putative transcriptional regulator - Prom 115528 - 115587 8.5 111 60 Op 2 . - CDS 115591 - 116577 879 ## COG0320 Lipoate synthase - Prom 116755 - 116814 11.9 112 61 Op 1 28/0.000 + CDS 116942 - 117904 1278 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 113 61 Op 2 24/0.000 + CDS 117918 - 118937 1484 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 114 61 Op 3 30/0.000 + CDS 118984 - 120474 1599 ## COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 115 61 Op 4 2/0.160 + CDS 120485 - 121888 1041 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 116 61 Op 5 10/0.000 + CDS 121915 - 122700 901 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 117 61 Op 6 . + CDS 122730 - 123788 1316 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 123813 - 123840 0.1 - Term 123801 - 123828 0.1 118 62 Op 1 . - CDS 123836 - 124747 849 ## COG3781 Predicted membrane protein 119 62 Op 2 . - CDS 124817 - 126088 1088 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - Prom 126208 - 126267 11.1 + Prom 126153 - 126212 9.5 120 63 Op 1 1/0.240 + CDS 126280 - 126975 684 ## COG0491 Zn-dependent hydrolases, including glyoxylases 121 63 Op 2 1/0.240 + CDS 126985 - 128640 1427 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 122 64 Tu 1 . + CDS 128912 - 129703 853 ## COG0730 Predicted permeases + Term 129741 - 129789 2.0 + Prom 129712 - 129771 3.5 123 65 Tu 1 . + CDS 129813 - 130817 1002 ## COG0460 Homoserine dehydrogenase 124 66 Tu 1 . - CDS 130850 - 131767 671 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 131828 - 131887 4.8 + Prom 131854 - 131913 7.1 125 67 Tu 1 . + CDS 131934 - 132788 664 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 132594 - 132638 4.0 126 68 Tu 1 . - CDS 132785 - 133180 326 ## COG1733 Predicted transcriptional regulators - Prom 133246 - 133305 4.6 + Prom 133183 - 133242 5.4 127 69 Tu 1 . + CDS 133276 - 133884 796 ## COG1182 Acyl carrier protein phosphodiesterase + Term 133896 - 133933 6.3 - Term 133884 - 133921 6.3 128 70 Tu 1 . - CDS 133968 - 135317 1170 ## COG2059 Chromate transport protein ChrA - Prom 135397 - 135456 8.3 + Prom 135425 - 135484 10.5 129 71 Op 1 1/0.240 + CDS 135559 - 136302 670 ## COG2188 Transcriptional regulators 130 71 Op 2 6/0.040 + CDS 136331 - 138064 1619 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 131 71 Op 3 2/0.160 + CDS 138085 - 138330 216 ## COG1146 Ferredoxin 132 71 Op 4 21/0.000 + CDS 138350 - 139780 1557 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 133 71 Op 5 24/0.000 + CDS 139815 - 140669 659 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 134 71 Op 6 1/0.240 + CDS 140671 - 141510 297 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 135 71 Op 7 1/0.240 + CDS 141507 - 142505 1036 ## COG1413 FOG: HEAT repeat 136 71 Op 8 . + CDS 142489 - 142770 134 ## COG3536 Uncharacterized protein conserved in bacteria + Term 142773 - 142814 8.4 - Term 142761 - 142801 8.2 137 72 Tu 1 . - CDS 142810 - 144096 1428 ## COG0477 Permeases of the major facilitator superfamily 138 73 Tu 1 . + CDS 144615 - 146819 2031 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 146843 - 146873 2.0 - Term 146822 - 146867 12.2 139 74 Tu 1 . - CDS 146877 - 148292 1580 ## COG1027 Aspartate ammonia-lyase - Prom 148316 - 148375 4.4 + Prom 148461 - 148520 9.7 140 75 Op 1 . + CDS 148709 - 148894 226 ## ACICU_01763 hypothetical protein + Prom 148898 - 148957 2.2 141 75 Op 2 . + CDS 148980 - 149207 225 ## ABAYE1919 hypothetical protein + Term 149453 - 149510 0.1 142 76 Tu 1 . + CDS 149985 - 150881 777 ## COG0583 Transcriptional regulator + Term 151032 - 151091 3.2 + Prom 151105 - 151164 5.5 143 77 Tu 1 . + CDS 151185 - 152015 668 ## COG0583 Transcriptional regulator + Term 152028 - 152079 10.1 - Term 152021 - 152061 7.2 144 78 Op 1 4/0.040 - CDS 152075 - 153247 1612 ## COG0183 Acetyl-CoA acetyltransferase 145 78 Op 2 4/0.040 - CDS 153313 - 154722 1269 ## COG2031 Short chain fatty acids transporter - Prom 154742 - 154801 3.3 146 79 Op 1 21/0.000 - CDS 154839 - 155480 957 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 147 79 Op 2 . - CDS 155482 - 156186 799 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit - Prom 156338 - 156397 6.1 148 80 Tu 1 . - CDS 156432 - 157313 771 ## COG0583 Transcriptional regulator + Prom 157515 - 157574 9.1 149 81 Tu 1 . + CDS 157594 - 158052 328 ## ABBFA_001759 hypothetical protein + Term 158277 - 158328 -0.9 + Prom 158169 - 158228 13.4 150 82 Op 1 5/0.040 + CDS 158461 - 159882 1633 ## COG2610 H+/gluconate symporter and related permeases 151 82 Op 2 . + CDS 159916 - 160701 1126 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) Predicted protein(s) >gi|333032548|gb|GL891878.1| GENE 1 13 - 456 194 147 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001900 NR:ns ## KEGG: ABBFA_001900 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 141 1 141 303 234 100.0 1e-60 MQSISLIIQIFLVLAFGYFLGPKLSLNIRHFIFKILPYFSYILLTSVALELTLALDQIDN PSTILPPALLIALTTSLGSFFTCLFAYTIFDKESVKGKISLQLFMNALKNIAKAFLALTI GVILGILLTQLHTHIPFNSWYLLLCTR >gi|333032548|gb|GL891878.1| GENE 2 506 - 2014 1266 502 aa, chain - ## HITS:1 COG:PA2097 KEGG:ns NR:ns ## COG: PA2097 COG2072 # Protein_GI_number: 15597293 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 13 492 12 489 491 439 43.0 1e-123 MLNAKQHAIQKTKIAIIGAGFGGLAMAIRLLQSQQSDFFILEKSNDVGGTWRENRYPGAA CDVQSHMYSLSFAPKTDWSKRYAEAPEIFDYIQDITNQYQIKNYCKFNHEVTHVQYDEMR HVWSLDFANQPSLEAQFVVFASGPLHIPQIPHIQGIEKFKGKVFHSSQWEHDYSLEGKSV ASIGTGGSAIQYVPEIAKDVKQLYVFQRTAAWVIPRDERKYSNLSKALFKKSNFYRQIHR SRLYWSNESRVVPIVQPQIMKYGQKLAEAFIRFQVKDKDLAKKLTPDFVMGCKRILISNK YFPTFNRKNVELVTEGIQEIKENSIITKDGKERPIDCLIYGTGFVTDPRIYLKHFTCIGR NQIELKQAWKNGAESYYGIMTKNFPNLFQLVGPNTVLGHNSIIFMIESQVNYILQLIDLV EKSGQHAIEIKPEVQDSFNERIQTQLQGTVWQAGGCSSWYQAADGKNFSLWPTYTWKYWL DTRKVNPKDYLLLNKCSQSYAA >gi|333032548|gb|GL891878.1| GENE 3 2175 - 3194 836 339 aa, chain + ## HITS:1 COG:PA2096 KEGG:ns NR:ns ## COG: PA2096 COG2207 # Protein_GI_number: 15597292 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 2 334 9 334 344 96 26.0 5e-20 MKRSALGLIYLIQGMRNAGIDVDSRLADIGIKVDSLDPSSTIHDSLEWDIQQIISENVDP EKGLFIGQHYALAGYGPLLMLLVTSHDIQTALEKGIQYQKLTHLFGTLSLQETENHIILN YLPVDLKTEIGLLRAQCEISGTYKFIQDIYTMMGLKMPDMRIDLPFPKPSDPDTVTQYYA YYGDDLHFNSTHAAFSLSKNVLEIKIPSADIITHRIYEAKCIKEIERLNEQDHQIPPIIQ YVQDYLELQQGIIPSMAETAFALKMPERTLRHQLQQLNTSYKQIREQIIKNKALKLMEYK EYSIEVIAEALGYSEPAAFNHAFKRWFGQSPRQYGKEFY >gi|333032548|gb|GL891878.1| GENE 4 3210 - 3311 68 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYYEKILNLTYHFISILTEESIANILSDHISF >gi|333032548|gb|GL891878.1| GENE 5 3278 - 4420 1225 380 aa, chain + ## HITS:1 COG:PA4438 KEGG:ns NR:ns ## COG: PA4438 COG1485 # Protein_GI_number: 15599634 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Pseudomonas aeruginosa # 16 372 2 363 364 353 48.0 2e-97 MLNLKSSHSTAFTPSSPAERYAEALASGQFMADEAQAQAVQELDRVWKELLNRYKASKKA FRRFRRQTSPKGVYMWGGVGRGKTWLMDQFYESVPFRRKTRMHFHHFMQHVHKELNKLSG QRNPLDIVADQIYKDAVVICFDEFFVSNVTDAMILSDLFQKLFVRGVTLIATSNIAPDGL YKNGIHRDRFIPTIEMVKKNCVVLNVDAGVDYRLRVLKQAQLFKSPLGNEAQSWISERYT ALTHTQTNSHEPIVINNRVVETLGHTEDVLWCEFSELCLKPRSPADFIEIANIYNTVLVS NVPHLTDFLSEGTRRFIYLVDEFYDRGVKLLLTSQDSIIDIYQGEKLAFEIERTRSRLLE MQSDEYLHSEHRHIDATKTS >gi|333032548|gb|GL891878.1| GENE 6 4790 - 6955 2602 721 aa, chain + ## HITS:1 COG:PA0482 KEGG:ns NR:ns ## COG: PA0482 COG2225 # Protein_GI_number: 15595679 # Func_class: C Energy production and conversion # Function: Malate synthase # Organism: Pseudomonas aeruginosa # 1 720 1 724 725 950 64.0 0 MTARIQKGKLAIAKELYDFIENEALPGSGLDSETYWKNFEQVVVDLSPKNKALLAKRDEL QAKIDEWHRNNKFELGAYKAFLTEIGYLLPEVEDFQITTENVDEEIALLAGPQLVVPVRN ARYCLNAANARWGSLYDALYGFDVISEEGGAEKGKGYNPVRGAKVIEFAKNFLNEIFPLA QGSHADATKYAIEQNKLVVTLKDGTKTGLAHEAQFVGFNGEEANPSEVVLLSNGLHVIIE IDANSPIGQTDLAGVKDLTLEAAVTTIQDLEDSVAAVDAEEKVEGYRNWLGLMKGTLQES IEKNGKTIVRALNKDREIKNLIGGTTKLHGRSLMLLRNVGHLMTNPAILVDGEEIFEGIM DALVTPLLSIADIRSENENKNSRKGSMYIVKPKMHGPEEVAFAVELFERAEQALGLPAKS LKIGIMDEERRTSVNLKNCIAAAKDRTIFINTGFMDRTGDEIHTSMEAAPVVRKEAVKTQ KWIAAYENRNVAIGLKCGLQGKAQIGKGMWPKPDSMKDMLATKAAHPNAGASCAWVPSPT GAVLHAMHYHQVNVKARQDQLKAEEMLSLDDLLTPPFATDTNWSAEEINNELENNCQGIL GYVVRWVDLGVGCSKVPDINNVGLMEDRATLRISSQHVANWLRHGIVTREQVEEVLKRMA KIVDEQNANDPLYKPMAANFETNIAFQAASDLIFKGCEQPSGYTEPLLHAARLKLKGYTG D >gi|333032548|gb|GL891878.1| GENE 7 7058 - 7507 337 149 aa, chain + ## HITS:1 COG:lin2499 KEGG:ns NR:ns ## COG: lin2499 COG0454 # Protein_GI_number: 16801561 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Listeria innocua # 1 134 1 133 147 95 40.0 4e-20 MINLKNLDRENWLLCAKLLLDESQKDYVAPNVYSIAESKVEEHYCPRVICFNDEVVGFLM YCVEIDPPDETLFWLFRFMIGKDHQAKGYGTLALQMAIDEMTSKGAKRIRTMYKSSNNIA GKLYKKMNFIETGEYDECGDIILELGISF >gi|333032548|gb|GL891878.1| GENE 8 7574 - 7987 531 137 aa, chain - ## HITS:1 COG:RSc1965 KEGG:ns NR:ns ## COG: RSc1965 COG0848 # Protein_GI_number: 17546684 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Ralstonia solanacearum # 8 135 7 132 137 94 49.0 8e-20 MGMNVGSNNDDDVMLEVNMTPLIDVMLVLIIMFIITIPAPNNAININLPNGTPPPTNEKP PEVIDVRIDAAGKVFWNNQQVSDRKALETLFQGVVAQKDQDQIKLKPDQMAEYKNVAMVM ATAQRLGVTKIGIVSSN >gi|333032548|gb|GL891878.1| GENE 9 8007 - 8429 525 140 aa, chain - ## HITS:1 COG:RSc1965 KEGG:ns NR:ns ## COG: RSc1965 COG0848 # Protein_GI_number: 17546684 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Ralstonia solanacearum # 3 136 1 134 137 94 41.0 7e-20 MGMSVGSEDDEEMIGTINTTPLVDVMLVLLIIFLITIPVVTHTVPVKLPEEKNTPYATTP ENIQLSVNKKGDIFWNESYVPNKEILLAKLQAVAQKRPQPEVHIRGDQLTHFEAIDQVIS TTKQAGIGKIAFVTTPPASP >gi|333032548|gb|GL891878.1| GENE 10 8445 - 9323 915 292 aa, chain - ## HITS:1 COG:RSc1964 KEGG:ns NR:ns ## COG: RSc1964 COG0811 # Protein_GI_number: 17546683 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Ralstonia solanacearum # 69 279 5 220 243 184 47.0 1e-46 MKKSTQPLVHFASASLIAACSLLPLSSVFAEETNNAPVATATTEATSNTSTPTPPPKPAT SETVKNPYGLEALWREGDLVAKSTLFILVLMSIGTWYIIISKLLQQGKVKRQGKEAEKHF WEATSLDNAAEGLEQSSAYRFIAEKGINSTKSHGGSLLERIDFNTWVSISIQRAIEKVQN HLGGGLAFLATVGSTAPFVGLFGTVWGIYHALTAIGISGQASIDKVAGPVGEALIMTAIG LAVAVPAVLGYNWLTRRNKAVMENVRSFGSDLHAVLLSGEINTNNSINRSIK >gi|333032548|gb|GL891878.1| GENE 11 9367 - 10083 605 238 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2047 NR:ns ## KEGG: ABAYE2047 # Name: not_defined # Def: TonB protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 238 9 246 246 302 98.0 6e-81 MGMTFTDIENKSAKRLIGIAAVIFLHLLVAYILMSGLANNIQKPAEKPVELQIIQDIKPP PPPKPEEPKPKEKPPEPPKMVEKVAKVPEPPKEVEKVATPVQKTTPVAQPTKVATPAPAA PSTPSPSPVAAPAPVAAAAPAPKPAGVTRGVSEGSAGCEKPEYPREALMNEEQGTVRIRV LVDTSGKVIDAKVKKSSGSKILDKAATKAYSLCTFKPAMKDGVPQQDWYEIEYPFVIE >gi|333032548|gb|GL891878.1| GENE 12 10193 - 12862 2260 889 aa, chain - ## HITS:1 COG:PA2070 KEGG:ns NR:ns ## COG: PA2070 COG1629 # Protein_GI_number: 15597266 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 35 889 25 880 880 616 39.0 1e-176 MKKKYNVRSQATPKIGKTILKLSTLSLSMMCLTMAQAAETEQSSTDEKPTKVVKVAVTGS SIKGVAAQSASPITVVKVDEILKQGVTTTEEALAKISANQSNFVTASNVGTSKTAGSAAN LRALGANKTLVLLNGRRLAANAYDSGVTNLNIIPLAMLDRIEVLRDGASSIYGTDAIGGV INFITKKQFTGLNLTAGYQKPEQKGGEQQDYSIFGGFGDLDENGYNVFGVVDYRKGDDVM AKDRKVSRRGGILPELGVNRTSSGSFPANVPGLGNPYASTGCGNNPLNSNDDGTCRYNSQ AVIGIVPKTEDISAMGRATFKLNDNFNAIAEYLYARSEVTTSVAPDVFFDLTLDPSSKYY PGKGITPALAGATGTIPLYLRSQSGNRVSNSINQSHRLFAGIEGETHGWDINSGVTYAHS SASDAIVSGYLNFDKTQEALNNGILNPFGPQNPEDANVWNELGVEGKYLKANLDTTTVDF TASRPIFKLPAGDVAFAVGASYRYEDWTSKVVTDVARVAPSTGVDPDEPVNTGDRNIKSV FTEFHIPLHKTLEAQIAARYDDYNDFGDTFNPKFALRWEPIKQLMFRTTYSTGFRAPTLW EVNGANSITNTGASYNDPVLCPGGVVQSGGKKERDCNMQFDRQNGGNKTLDPEESKSFTA GLVFEPIKNLAFTLDYFNIEVDKQIATLSETAIFNDPVKYADKFVRNPDGSLDYIITTQQ NLGGIKTSGFDVGLSWVSPMTATGRFGFNIDGTYITDYKYQAEPNGEWIGVAGSYSGLDY QSIILRWKHTANLNWNYENWALNLQQNFSRGYQDQNSNGQNHRVSDYTTYNISGTYKGFK NLEVTAGIKNIFDEDPPASNVIDNFQMGYDPRYADPLGRTYFVRGTYKF >gi|333032548|gb|GL891878.1| GENE 13 13638 - 15428 1575 596 aa, chain + ## HITS:1 COG:SMc04293 KEGG:ns NR:ns ## COG: SMc04293 COG0747 # Protein_GI_number: 15965704 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Sinorhizobium meliloti # 60 557 53 496 538 134 25.0 7e-31 MGMNLKLKFFKLAILSLAITSVPCAYAITTAQPNKILHVAYEAPDDGFDMVKTTNFYSAN IAEAIFEPLLKYDYLARPLQLVPNTVESLPKVEQDGKVYIFKIKPGIYFTNDPAFKGKRR ELVAEDYVYTIKRILDPKNRAPSVSFIDGKLQGADTVVAQAKKTGKFDYAAPIAGVKALD RYTLQFTLTRQDFNFPYILAYITFGAVAKEVVDYYGDRIGMHPVGTGPYMLSKYVPRSKV ELVANPDYRGFVWNFKSTGTPWDNQLVKEMSGKKMPQVGKVVVSIIEEEQSRWLAFQSGQ LDFDKLTANAVPQALDGNQLKASFKKRGIKHYPNKDPEITYTMMNMRDPVIGGFSPEKIA LRRAITLSYNQKESIQQAYKSQAVRSQMFIPEGVNGYNPKYKSSVGYNPLLANKLLDYYG YKKAADGYRTLPNGKPLILKINTENSSASVIHSELWKKNLDAIGIRADFKVSNFADNLKA ATQCKYMIWSGAWIADYPEGDNFAQLLYGPNAGQGNHACYQSKTYDALYTQAIHLPPQQR LPYYEKLNRQIEADNPWIIHVTRIRNWLIQPQVQGFKAHPMMNTNWQYLDITSIKK >gi|333032548|gb|GL891878.1| GENE 14 15447 - 17267 1409 606 aa, chain + ## HITS:1 COG:SMc04293 KEGG:ns NR:ns ## COG: SMc04293 COG0747 # Protein_GI_number: 15965704 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Sinorhizobium meliloti # 52 554 41 486 538 110 24.0 7e-24 MTENLKQKLKHCSVGLFFAGMALTGSISIFAKSPADPNKVLRYVFPTAETGFDPAYVHDL YSAHVLTSIFETLYTYDYLARPAKLIPHVATAMPEVSADGLTYTIHIKKGIYFTPDPAFK GKPRELTAYDYAYSFKRLLDPNLRSPNSWLLEDKIEGMNALVKAANKSGKFNYDQNVSGL QTPDKYTLVIRLVKPDYNFPLLLAHDPTGAVAREVIEKYKDKAGFVMGHPVGTGPYMLSK WIPASRIVLKANPEYRGFTWNFNASSPGDEAIVKRLKGKQMPQIGTIDIQVMEENQSRWL AFQRGEVDIIQLEGQLVSKAIKDGKLRPELAKEGVQLSRIVDPEISYIYWNLKDPVVGGM SKEKIALRRAIAMSRSIDQEIKLVRNSDAERLHFPVPPGVVGYDPQYRSSTPYSVKAANL LLDRYHYKKDASGWRTQPNGKPLVVEYKARNDSIGQQSAELWKKNFDSLHIRMVYKPMLF SDLLRSQKQCEGMFGSSAWIADYPDGDNFMQNFYGPNTHMTNWSCGSIPEFDELYRQSQQ VKPGPERDALYRKMTRLLEVYMPVQMSYARYRNMLAQPRIIGYKKHPILHAEWMYFDIDT NTKSNH >gi|333032548|gb|GL891878.1| GENE 15 17268 - 19301 2137 677 aa, chain + ## HITS:1 COG:STM3594 KEGG:ns NR:ns ## COG: STM3594 COG0339 # Protein_GI_number: 16766880 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Salmonella typhimurium LT2 # 79 662 56 667 680 261 32.0 4e-69 MKKIGDTMKNNTLKMTTLCMLTIGISQFASAEATRATLPLLKAEQLPAWCDSNLKKIQQE ISSFEKTPVKNDAAAAPILAKWDKIFAHLEDFSGPIGLYSNVDPDAKLRKAAEDCEIKIN QFHTDIFQNSKLYNVIKNTKANDPIDQKYRQDILDQFEDTGVQLEPAKRARMKAILDELT KLEQEYNRNIRDNPEKLEFTPEEMKGLPESYISGLKKNTKGNYLLGFEYPEYRPFMELAD NDDARKRYQIAFTRRGTKQNLKLLKQAIDLRYELAQLFGKASYADWALKDRMAKTPETVN KFLAEVQKTVAPLERKEVEELRAFKAQTLKTPLDKTEITRWSEAYWSEKLRKSKYQIDQE KLRDYFPTLAAQKWLFAISSDLYGIDFKPVKVKAWQDEVEYYDVVDKKTGKLLGGLYMDK FPREGKYGHAAVWGVYGGSTLTNRLPISVLVTNFNRKGLNSDELETFVHEFGHALHGILS NTRYASQSGTSVERDFVEAPSQMYEEWARRKETLSKVADYCDPACPRVDDELIARLKAVH NYGRGLRYARQTLYAQYDMALHTADALKVKPLETWQKMEAATALGYVPTTEFPGQFGHLM GGYQAGYYGYMWSEVLALDMLSAYGDNLNNPQVGQRYRQTILSQGSQKPAAELVKDFLGR DPDNKAFFNEITGQRVK >gi|333032548|gb|GL891878.1| GENE 16 19314 - 20252 1024 312 aa, chain + ## HITS:1 COG:STM0850 KEGG:ns NR:ns ## COG: STM0850 COG0601 # Protein_GI_number: 16764212 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Salmonella typhimurium LT2 # 1 312 1 306 306 175 33.0 8e-44 MLAYVIRRLWQMIPTMLGVVLLIFILFNWVGGDPAYILAGKMSNPEQIENIRKQLGVDQP YYVQLWIFIKQILTFDYGASWSTGESVSQIILTRLGPSLTLLIPLTILQTVISIILALAV AAVRGSLTDRMVMMLCTIGMSISILVYIIVFQYVLAYQLSWFPVQGWSDSFTENLFKFSL LPILIMLVVSIAPTLRLYRSFVLDEVNQDYVRTARAKGVGESRILSVHVLRNASIPIITD VMSNLPALLIGAFLIERFFGIPGIGREVIIAVERSDFPVIKAITVYIAAATMIFNLIADL VYKVVDPRVQLK >gi|333032548|gb|GL891878.1| GENE 17 20260 - 21402 1134 380 aa, chain + ## HITS:1 COG:SA0846 KEGG:ns NR:ns ## COG: SA0846 COG1173 # Protein_GI_number: 15926576 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Staphylococcus aureus N315 # 155 380 132 355 356 160 37.0 4e-39 MLSVLSKRKLETQTAPASAGLWRLAMRRLRADKIAMASLIVVLFYLIVLILSLTGVIASD WNKEVAVSYAPPTFIGADKTTEALKSTAAVDEELPENPVDPLKDVIHQLKAEIKQEKSSG SAIDYYGVVDPLADDMKAIDQQLGGHLLDQQSELKSTLIFGADKWGQDVLKKTIKGAETS IIVGLVSALLAVTLGTLLGAISGYFGGWVDDILNWFYNIFTSIPYLLLVLAIAAVLQQKG ILSIVLILGLTGWTGVYRLIRAEYMKHTAREYVLAAKAIGVGHFRRMFIHIFPNVSHIAL VQMSILVVSFIKSEVILSFLGFGVPVGVVSWGSMLNEAQSELLLGKWWQLVAASVAMAVL VTAFSMFTDALRDALDPKLK >gi|333032548|gb|GL891878.1| GENE 18 21415 - 23145 683 576 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 312 570 9 267 329 267 51 2e-70 MSEQEKKTPLLHIENLRVSFKGEDKQYIETVKGISFDIPTNTTVALVGESGSGKSVTSLA TMGLLPVGQSKIDEKSKIIFEGKDLLGLSRTEMRKICGKDIAMIFQEPMSSLNPVFTVGN QIAEVLCLHMGMSRKQARQRVLELLKEVGIPSPETKIDAYPNQLSGGQQQRVMIAMAIAC EPKLLIADEPTTALDVTIQKQIIDLLESLRQRRQMSMLFITHDLALVGEIADQVIVMRHG EIREQGTAEQVLEQPKDVYTRALLYCRPQMSQRPYRLPVTSDFMRQENNILVEQSFDVSE IPERKRGLNGDEHIILEVKDLKKSFYSRKGLFGKEEFQAVKGVSFKLAKGKTLGLVGESG SGKTTVGLLLMRLHQASGGQALIEGKDILSLTEKEFAKYQRKIQIIFQNPYASLNPRFTI GQILLEPMQIHGIGKDDAERKQIALGLLERVNLPEQAYYRYPHEFSGGQRQRIAIARCLT LKPEILICDESVSALDVSVQAQVLNLLQDLQDEFGLSYIFISHDLSVVKYISDQVMVMNH GEVVEIANSDELYAHPQHDYTKRLLQAIPQGIQHVS >gi|333032548|gb|GL891878.1| GENE 19 23178 - 23912 522 244 aa, chain + ## HITS:1 COG:BS_yoaM KEGG:ns NR:ns ## COG: BS_yoaM COG2135 # Protein_GI_number: 16078926 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 74 228 55 206 227 62 29.0 6e-10 MPFYLVYRINTYKIRDVKVQYFIPAMCANFKPLTLAQLQQLQLPVVGFSYADEVYPGGTM PLLFKSPQGFEWREVMFGLVPKWAEDTNIAKHTYNARHETIFQKPSFQEAALKCKFGVIP VTEFYESKYINDKPERWGVRRKDGQAFFIAAIYEICKMNETIVRSASMLTMDAIDHPMMK DFHEPGDVKRSVIVIPHDRLDEWLSLETPDISSFIEGFPVEEFECLHVPKEKIIKPTPQL SMFE >gi|333032548|gb|GL891878.1| GENE 20 23966 - 24334 503 122 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001882 NR:ns ## KEGG: ABBFA_001882 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 122 1 122 122 233 100.0 2e-60 MMLYGYHFSTIENNWEDLTPLNEFLQTFADDDGDVSQRDKESLKEIIAKSDTALALAKEM GWDGSYTGCPYLFWLPSKNTQSFEYGFVFKQTSDNSTFVISPIELAYLAQDEQVQTLSKN ID >gi|333032548|gb|GL891878.1| GENE 21 24644 - 25501 732 285 aa, chain + ## HITS:1 COG:XF0187 KEGG:ns NR:ns ## COG: XF0187 COG1218 # Protein_GI_number: 15836792 # Func_class: P Inorganic ion transport and metabolism # Function: 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase # Organism: Xylella fastidiosa 9a5c # 6 267 9 262 272 161 37.0 1e-39 MFITTTRPNDALIEQLLPILEEASQILLQEYQNYSAGYEFTIQEKHDDSPVTQADLKVNR FLLKHLAEITPELPVLSEESDYSARHAWSSCWMLDPLDGTKEFIHERDEFTINLSLIEGR ETIFSVIVVPCEQVVYLGYLKDLPFKYSFSQQQWYQYQKTPYSKQAPVQIGLSHSSKNPK YQKFIEPIEKIRTVIRREAGSAYKFCMMLEGEIDIYPRFHPTSEWDTSSGQGLLESIGGG LLTLTGKPFEYNQRDTVLNGGFIAFRDQESKKIAFEALAQSGVLD >gi|333032548|gb|GL891878.1| GENE 22 25559 - 26293 750 244 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2036 NR:ns ## KEGG: ABAYE2036 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 244 9 252 252 509 100.0 1e-143 MALDLLPKSMFEAIDLLPDASTPVTLFTRHSLRELVDGQGLAGYDLQLTPQGRELAQEWG SYLIKNTDRVIQHCISSPIQRCVDTAALMIEGADGVSPEPNTHTIEIVEQGLLVEPGSFV LDIQQAAPYFRKQGALGFINSFVNNALPGMKHPITGVLDVLELIYQTHPKTKSGLSLAVS HDTIIAAIVAVISGNNQIQKADWPAMMEGLFVWFEGDEFPNCKLKWIWRGKTYELDVSEF HKVQ >gi|333032548|gb|GL891878.1| GENE 23 26350 - 26616 427 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126641662|ref|YP_001084646.1| 30S ribosomal protein S20 [Acinetobacter baumannii ATCC 17978] # 1 88 1 88 88 169 98 1e-40 MANSAQAKKRARQNVKARKHNASLRSMVRTYIKRTLSAIAGGDYAVATEAYKKAVPVIDR MADKGIIHKNKAARHKSRLNAQVKALAN >gi|333032548|gb|GL891878.1| GENE 24 26829 - 27494 586 221 aa, chain + ## HITS:1 COG:STM3268 KEGG:ns NR:ns ## COG: STM3268 COG0702 # Protein_GI_number: 16766566 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate-sugar epimerases # Organism: Salmonella typhimurium LT2 # 7 203 14 202 222 111 35.0 1e-24 MTISTKKAIVVGATGLVGLALVEQLEQTPEFEAITVVVRKESQLLNTYKKVTQLVIDDFL LLNDEDVNGHTHAFSCLGTTLKIAGSKQRFYAVDYEINAHFADLIQDKHIHFLIVSALGA NANSPIFYNKVKGELEDYIQSLGIEKLSIFRPSLLIGKRSDVRFIEDLGQSLFKLIENKW NKPFKYKPVTAEQLAHTMVVAALTQIEAFKRYDNLSIQQTR >gi|333032548|gb|GL891878.1| GENE 25 27507 - 28013 720 168 aa, chain + ## HITS:1 COG:PA1772 KEGG:ns NR:ns ## COG: PA1772 COG0684 # Protein_GI_number: 15596969 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Pseudomonas aeruginosa # 6 167 3 158 162 184 55.0 6e-47 MSTVPFVTCDLLDDNPEKDLQVVTPSMDGKFFKSYGARQTFGGQVVTVKCFEDNSRVKEL LATDGTGKVLVVDGGASMRCALMGDMIAESAVKNNWNGVVIYGCVRDVDALATLDLGVHA LAAIPQKSNRKGIGEVDIPLYFGGVTIQSGDFIYADNNGIVIAKEKLV >gi|333032548|gb|GL891878.1| GENE 26 28037 - 28816 702 259 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01647 NR:ns ## KEGG: ACICU_01647 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 259 1 259 259 517 100.0 1e-145 MVNHQIKVLQALASAIAEGGRGVTGTAFPKQPVRALKLYEFEGSPFCRRVREVITLLNLD VEIYPCPKGGLKYRSIVKEIGGKLQFPFFIDENTGDKLYESQDIIHHLFKYYGKTGQTPD KFSNYPKMPYLAFAGTLLNGARGVWINKKIVNRAAPEHKLELWSFEASPYSRVVRSVLSE LELPYILHSVAKERWQDMGPAILRLKPGKYEPLKEGKREKLLPVMQGKMQVPYLVDPNTG VKMFESAEIVKYLKKQYGS >gi|333032548|gb|GL891878.1| GENE 27 28961 - 29902 1067 313 aa, chain + ## HITS:1 COG:MT0820 KEGG:ns NR:ns ## COG: MT0820 COG2837 # Protein_GI_number: 15840211 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Mycobacterium tuberculosis CDC1551 # 7 308 9 307 335 298 49.0 1e-80 MECMRIQPVTSHPGENALFIVLGLAQGDSVVEKVKDFAGKFSALTRSLSNRYPETKFNAI LGFSSNAWDILFPQQAKPQELETFQEIKGPKYTAVSTPGDLFFHIRADRQALCYELGSII NEQLGKVTYPIDEVHGFRYFDGRAIIGFVDGTENPEPVIAAQWALVGNEDPDFIGGSYAF IQKYTHDMEKWRALSDDEQEKVIGRKKFNDIELDDEEKPLTAHNVVSKAHDAEGNELKIM RANMPFSNPSKNEYGTFFIGYSRKFSTTRQMLENMFLGNEQGNLDRLLDFSTAQTGTLFF VPTVDFLDGLGDE >gi|333032548|gb|GL891878.1| GENE 28 29983 - 30339 310 118 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01649 NR:ns ## KEGG: ACICU_01649 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 118 1 118 118 195 100.0 6e-49 MFKKLTQLFQGSKETPEQIYLQENQLSFDSERGPVIKNVVINEKWSEHLEYFSNRKLQNF DNLPKLFQITPQINEKIDLEIATQRYVERLGNTQEKLLELKAIIQVLNQYYVMFLRDK >gi|333032548|gb|GL891878.1| GENE 29 30474 - 33935 3460 1153 aa, chain + ## HITS:1 COG:PA3002 KEGG:ns NR:ns ## COG: PA3002 COG1197 # Protein_GI_number: 15598198 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Pseudomonas aeruginosa # 16 1150 13 1146 1148 1220 55.0 0 MFQQEISQLNLQQLKAGEKRWVGSLLGSSAALLLKEIATQHSSLLVLVARNNQHVAQLES ELEFYGVKPTIFPDWEILPYDRLSPHQDIVSERLAILSNMPQQGVLLISASTLAQRVAPY SWVLGEHFDIKVGQKFDLEQQKLRLVQAGYHLVDTVYDHGEFAVRGSIMDIFASGQESPI RIDLFDDEIDSLKFFDPETQRTTTTLKSFTVLPAKEFPLKEGRSVFRDRYSEFFPTANPK KNPIYQDVLDGIASPGIEFYLPLFFNKEQMQSQSMFTTYLPKNCIVITTNDIDTDLTSFW KEVMRRYEDRRHNMDQPILAPEELFISPNHLLSALNQFPRMLVSAETIEEKAGALNLKTE QPPKLPVDPKKEKPFSAVKKYIDEANHPVLLVAESAGRRESLKDALRSSLGEIPNVENFE QFQISQFAIAITNAPLDRGLLLTDQLTVISENQLYEHRVVQRRRKRQQEVSEEFLIRSLT ELSIGAPVVHIDHGVGRYAGLITLAIEGQDYEFLQLDYAEDAKVYVPVTNLHLISRYSGG DPDLAPLHKIGTDAWSKAKRKALEQIHDVAAELLHIQARRQSKPGFAFELDQSLYMQFAS GFAYEETLDQANAIEATLYDMQQAKPMDRLVCGDVGFGKTEVAMRAAFVAVQNGKQVAVL VPTTLLAQQHYESFKDRFADWPVRIEVLSRFGSNKTHLKNIEDLANGKVDIVVGTHKLLQ ENVQFKDLGLMVVDEEHRFGVRDKERIKALRADVDMLTLTATPIPRTLNMAFSGMRDLSI IATPPARRLAVKTFVQEHTDASIKEAILRELLRGGQVYFLHNEVETIERAAENIRVLVPE ARVAVAHGQMRERELEQVMQQFYHKEYNVLVCSTIIETGIDVPNANTILIERADKLGLAQ LHQLRGRVGRSHHQAYAYLLVPSIKHLKGDAEKRLDAIQRASTLGAGFMLATEDLEIRGA GELLGEQQSGSMQAIGYSLYMEMLEKATKAIQQGKTPNFDAPLSLTAEINLHIPALIPDD YLGDVHQRLLFYKRISNTDTQEKLDNIRMELIDRFGIPPQSVKHLFSVHQIRLKAEHLGI TKIDINTQGGNIEFSPDTPVQAISIIQLMQKNPTYYRMEGGQRLKVMVQLEEYEKRIQFI NDLLQKLMSELHA >gi|333032548|gb|GL891878.1| GENE 30 34136 - 34570 422 144 aa, chain + ## HITS:1 COG:PA0959 KEGG:ns NR:ns ## COG: PA0959 COG0537 # Protein_GI_number: 15596156 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Pseudomonas aeruginosa # 1 131 68 199 209 141 52.0 4e-34 MFSLHPQLAQDTFFVGDFPLSTCRLMNDMQFPWLILVPRVPGITELYELSQADQEQFLRE SSWLSSQLSRVFRADKMNVAALGNMVPQLHFHHVVRYQNDVAWPKPVWGTPAVPYTSDVL AHMRQTLMLALRGQGDMPFDWRMD >gi|333032548|gb|GL891878.1| GENE 31 34623 - 36092 598 489 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020820|ref|YP_526647.1| ribosomal protein L19 [Saccharophagus degradans 2-40] # 80 457 82 455 460 234 34 1e-60 MQLERFIDREPKQFAYFHRLMGYSILSLILVIYAFTSPNTNYQIYIPPFFLFLLFVSSKL EHWLQYQFDKKTQKSVFFAIDAIVVAVTLAGVHLNLVPTFIALFALFYSAINSRISFAVI CLTSLLGAIIFYLSTFFLFGFHPYFEATSQELTVITLLGLVMFITIGNYYQHRWVKKISQ QRQHYYDQMTRYIAFANQLSRYAPLQLWQSIMRGEAEAKIEYKRKKMTVFFSDIQGFTEL SETLIPDDLAFLLNDYLSHMTEIAKQYEATVDKFMGDAILIFFGDPNSQGVEQDAKSCVE MAIAMRQQMKLLRERWKKMGYSALHIRMGISTGYCHVGNYGATHRMAYTIVGRDVNLAAR LQYAAEIDEILISDDTYQLIKSDFLCAPKTPIYLKGIQGAVKTWQVMEKYTGNKSDHQQW FDYEYKGFHLVLNLEEVQNYEYPELVEVLEKMIQRIKVQQTLVNTQGVAQLRLEDEVKPI NIDEEQDQV >gi|333032548|gb|GL891878.1| GENE 32 36139 - 36477 435 112 aa, chain - ## HITS:1 COG:RSc1025 KEGG:ns NR:ns ## COG: RSc1025 COG0633 # Protein_GI_number: 17545744 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Ralstonia solanacearum # 1 112 1 112 112 151 66.0 3e-37 MPRIKVLPHAQFCPEGAEFEVEQNANLCQSLLNKGIKIEHACDMSCACTTCHVIVRKGFD SLEEMNDVEADLLDRAWGLEPDSRLSCQVKVVDEDLEIEIPKYTINHASENH >gi|333032548|gb|GL891878.1| GENE 33 36496 - 38355 2170 619 aa, chain - ## HITS:1 COG:RSc1024 KEGG:ns NR:ns ## COG: RSc1024 COG0443 # Protein_GI_number: 17545743 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Ralstonia solanacearum # 1 614 1 619 621 602 55.0 1e-172 MALLQIAEPGQSSAPHQHRIAIGIDLGTTHSLVATVLSGKPKVLNDVQNRRLLPSIVHYG DNTTHYGEEAKPFIIADPKNTIVSVKRFMGRSKADIKFQHPYELVGSENEMPAFETRAGR KTPVEISAEILKQLKDRAEDSLQNPVNGAVITVPAYFDEAQRQATRDAAQLAGLNVLRLL NEPTAAAVAYGLDQESNLATDRNYVIYDLGGGTFDVSILRFSQGVFEVLATGGHTALGGD DLDRLIVKWAKKQLNIDVLSDEDYAVFIVAARQAKEQLSTQDSVELKLLEATLTLDRPTF ESIIQVALDKTISVCKRVLRDAKLELTDIQNVVLVGGSTRSYAVQKAVREVFAQEPLCTI NPDEVVAIGASITANQLIGNSQDGSLLLDVTPLSLGLETMGGLVERLISRNTAIPVARRQ EFTTYQDGQTAMLIHVVQGERDLVEHCRSLGRFVLHGIPPMTAGQARIEVTFQVDADGLL TVSAREATSGVQAHIDIKPSYGLSEADTERLLIEGFQHAEEDKNLRHLKETKVEAERELE ALEQALKVDADLLDEKQLDALNSAKESLKAQLEGSDIQAIEHAVQQLKVHSDAFAALRMN RHIDHALKGTKLDDWSKSN >gi|333032548|gb|GL891878.1| GENE 34 38394 - 38912 668 172 aa, chain - ## HITS:1 COG:VC0751 KEGG:ns NR:ns ## COG: VC0751 COG1076 # Protein_GI_number: 15640770 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-domain-containing proteins 1 # Organism: Vibrio cholerae # 1 160 1 170 171 82 32.0 3e-16 MNHFELFNLPVALDIDLASLKSNFLSLQQQYHPDKAADKDQALIKSSEINQAFKTLSQVD SRAAYLLALKKQDHHLDQSISDFEFLQSALELREQLDEATSSEHLRTLRLEVQQWIDGLV REFKIDYSEEDWAEARDTVRKLRFFQRVLNDIDKAEDQLLDDEDSFDLDDDF >gi|333032548|gb|GL891878.1| GENE 35 38998 - 39318 422 106 aa, chain - ## HITS:1 COG:PA3812 KEGG:ns NR:ns ## COG: PA3812 COG0316 # Protein_GI_number: 15599007 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 2 106 3 107 107 151 67.0 2e-37 MIHLTENAASHISNYLKNRGKGEGIRVGVKTSGCSGLAYVLEFVDDIDEHDQIFEQFGVK VFVDPKSLVYLDGLEMDYVKNGLNEGFEFNNPNKKGECGCGESFTV >gi|333032548|gb|GL891878.1| GENE 36 39349 - 39735 521 128 aa, chain - ## HITS:1 COG:ECs3395 KEGG:ns NR:ns ## COG: ECs3395 COG0822 # Protein_GI_number: 15832649 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Escherichia coli O157:H7 # 1 125 1 125 128 209 84.0 9e-55 MAYSEKVIDHYENPRNVGVLDKNSENVGTGMVGAPACGDVMRLQIQVNDNGVIEEARFKT YGCGSAIASSSLVTEWLKGKTLDEAQAIKNIDIATELALPPVKVHCSVLAEDAIKAAIED YRSKKSKA >gi|333032548|gb|GL891878.1| GENE 37 39802 - 41019 1610 405 aa, chain - ## HITS:1 COG:PA3814 KEGG:ns NR:ns ## COG: PA3814 COG1104 # Protein_GI_number: 15599009 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Pseudomonas aeruginosa # 1 405 1 404 404 599 72.0 1e-171 MKRPIYLDYAATTPVDPQVAERMMECLTFDGTFGNAASRSHAYGWQAEEKVEYAREQVAN LIKADPREIVWTSGATESDNLALKGVAQFYASKGKHIITSKIEHKAVLDPCRELEEQGFE ITYLEPEPQTGLITPEMVKAALRPDTILVSLMMVNNEIGTVTDVAAIGELTRANKTFFHV DAAQAAGKVDIDLSTMKIDLMSFSAHKIYGPKGIGALYVRRSPRVRLKAQIHGGGHERGM RSGTLATHQIVGMGEAFELAGKTMHAEQERIRKLRDKLWNGLQDLEQVFLNGHPTQNVAN YLNVSFNFVEGESLMMSLKDAAVSSGSACTSATLEPSYVLRALGLSDELAHSSIRFSFGK YTTEEDIDHVLTITKAAVEKLRELSPLWDMYKEGIDLSTVEWAEH >gi|333032548|gb|GL891878.1| GENE 38 41021 - 41494 521 157 aa, chain - ## HITS:1 COG:PA3815 KEGG:ns NR:ns ## COG: PA3815 COG1959 # Protein_GI_number: 15599010 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 143 1 143 163 166 58.0 2e-41 MRLTTRGRYAVTALLDLALQPTEQTITLAEIAARQSISVAYLEQLFAKLKRHGLVSSVRG ANGGYHLARNADEITVLEIIEAVNETVDATRCDHKGNCQNGAMCLTHDLWQELSHHIADY LAKITLANLISRDNVQTVALRQNVTGTDSALLSGTGI >gi|333032548|gb|GL891878.1| GENE 39 41605 - 42252 525 215 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01661 NR:ns ## KEGG: ACICU_01661 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 215 1 215 215 379 100.0 1e-104 MSETQQRQKHPRLLLNIVLIILETFFSFILTHDGVLRLQAKKFIANKITIRINSYLPFFD FYVQFTEKGLLFDIHSYDRRIDLEINSTLVDLIKIFVFSNQRSLNNMRIDGDAETKKELI DLISHLTLPKLLADWKQWFNAPDDEAEALASRKKIAPLLEKIDQQRSEINSLHVEIKQYQ NRIARLQQRQRNINLCFGIISLIFIVYFIYNLWVA >gi|333032548|gb|GL891878.1| GENE 40 42463 - 42918 446 151 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2018 NR:ns ## KEGG: ABAYE2018 # Name: not_defined # Def: poly(hydroxyalcanoate) granule associated protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 151 18 168 168 213 100.0 2e-54 MDNANIETQAEEQGEKNKSKSKSSRKSALDFRKYTKQIWLAGLGAFSRAEEEGNKLFDSL VKVGEELESKTGDLADTTVGKVTEKAKESVSDTKDKVEKILDTSVNHSLNRIGLVTPKDL QHIEQLLVQLHIKVDALIEENQKLKAKLNEK >gi|333032548|gb|GL891878.1| GENE 41 43088 - 43360 428 90 aa, chain + ## HITS:1 COG:YPO3154 KEGG:ns NR:ns ## COG: YPO3154 COG0776 # Protein_GI_number: 16123316 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Yersinia pestis # 1 89 1 89 90 100 67.0 9e-22 MNKSELIDAIAEKGGVSKTDAGKALDATIASITEALKKGDTVTLVGFGTFSVKERAARTG RNPKTGEELQIKATKVPSFKAGKGLKDSVA >gi|333032548|gb|GL891878.1| GENE 42 43492 - 45357 1945 621 aa, chain + ## HITS:1 COG:PA1805 KEGG:ns NR:ns ## COG: PA1805 COG0760 # Protein_GI_number: 15597002 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Pseudomonas aeruginosa # 1 621 2 619 621 180 25.0 9e-45 MESFRTVIKGWLGKVLLVLFLTPLALVGIEGYFNRGNKADVAKTVNGQDISKKDLETLTQ RYKEQYLAAVKGDESLLNLPVIQAKALDILVSRNLLIQQAEKLGISLSNAQIEQMLAQQP SLQENGQFSQKLYENYLRSIGMTSEGLIASLRQDHALKMLTSTFADYSLVSKVDLMQIAN LQTEQRTLHLASIKLDPYKAGLTASDQEATDYYNKHQNEFKQPASVDVDYVVLSPSLMAK PAPATDAELKQAYAKFVETQQKDAKRIVKHILITTDARDDAAAQKLAKDVYAKIQGGLSF AQAAAQFSEDPTSKTKGGLVEAYAPGVFSDAFDKTVLSLKNGQISQPVKTQYGYHIIEAE TQANQIPSFEAEKPRLIAEVEKNKVASVYSDTVNSLNETIVGNDSLDAVVQQVKGTKIES LNGVTLATQNPYLSDPNVKIKLFNDDVKNGDRNASSNIQLANGDTVWVKVRDYHAAGVKP LAQAMNEVKAKVIDEKARKAAQAKIATMLTEFKTQPAEQVVAKNKVAFESAGVFTRSQGL KRAIERAAFSVPAPKPGMWSVTIANLPNELVVVAVSNVNSAAVNAMPADQLQQLKQLYRQ SRGQQILEDYSEYLKSHAKIK >gi|333032548|gb|GL891878.1| GENE 43 45397 - 46362 891 321 aa, chain - ## HITS:1 COG:mll0782 KEGG:ns NR:ns ## COG: mll0782 COG2207 # Protein_GI_number: 13470944 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 4 316 13 321 329 133 28.0 5e-31 MIDHVNMDALSKFFDDIHLNKSEYIYIKAQGEWAFKTQDQSALLAYIVLTGSVYIQLNVS EKITARAGDIILIPSGKAHHATDSKATASKLVDPVDITPLFNGHRHDPIELGSSTSENTL LLCLRCQVDTYMAGPLINALPSIMHIQHENQATPPEWLQIGLYFLAVETQKIQPGHDKII DHLVSILLIECIRDHIQQMSDQQNWLGALTHPELSNALSAIHSQPEISWTVESLAEQCCM SRSKFANLFNSIIGEPPLTYLQHYRFRLASQYLRTSNLSIQQISNKVGYSSETAFSQAFK RVFDLSPKQYRQNYIGTNLDE >gi|333032548|gb|GL891878.1| GENE 44 46534 - 47757 1497 407 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01666 NR:ns ## KEGG: ACICU_01666 # Name: not_defined # Def: terminal alkane-1-monooxygenase (EC:1.14.15.3) # Organism: A.baumannii_ACICU # Pathway: Fatty acid metabolism [PATH:abc00071] # 1 407 1 407 407 839 100.0 0 MNAPVNVQQELMPVPASMREIDRKRYLWMISPALPVIGLGILAGYHFGPRPLKKVFALGG PLLLHVVIPAIDTIIGKDARNPTDEEIKLLEKDPYYSRLVKSFIPLQYAANIYACYLTSL KDTSFIDKILLGISMGAINGIAINTAHELSHKHDRIDHILSHLALVPTGYNHFRIEHPYG HHKRAATPEDPASSRMGETFYEFWPRTVIGSFKSAIEIEKNRLKRKGKEFWSLDNELLQG WGMSAAFHASMVGIFGKGTIPYLATQAFYGISLFEIINYIEHYGLLRQKKENGQYERTMP EHSWNNNNVVTNLFLYQLQRHSDHHAYPTRPFQALRHFDEAPELPSGYASMLLPAMIPSW WFKMMDKRVFDHYKGDLNKANISPKRRAKIFKKFGVVDKSLEATQAE >gi|333032548|gb|GL891878.1| GENE 45 47877 - 49082 1459 401 aa, chain - ## HITS:1 COG:PA4994 KEGG:ns NR:ns ## COG: PA4994 COG1960 # Protein_GI_number: 15600187 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 401 1 402 402 558 73.0 1e-159 MNLQNPKKFKMMIDQAHDVAINVLRPISRKYDKAEHAYPKELDMLASLIDGMNEGGEGIN AGAAGAGKRGETDNEGIRNGTNMSTALGIIEMCYGDTGLLLSMPRQGLGNSAIAAVANDE QLERFKGTWAAMAITEPGCGSDSAAIRTTATKDGNDYILNGEKIFVTSGERADSVVVWAT LDRKLGRAAIKSFVVPKGTPGMKVERLEHKLGIKASDTAVISFTDCRVPAENLLGNPEID VAKGFAGVMETFDNTRPLVAAMAIGCAKASLERIKEIFKDQLDPNYSTPYLQTSNLAAQI YRMEAEWEAARLLMLKATWMADNKKPNSKEASIAKAKAGRVGNEITLKCVELAASVGYNE DELLEKWARDSKILDIFEGTQQIQQLIIARRELGKSSSELK >gi|333032548|gb|GL891878.1| GENE 46 49104 - 50396 1245 430 aa, chain - ## HITS:1 COG:PA4995 KEGG:ns NR:ns ## COG: PA4995 COG1960 # Protein_GI_number: 15600188 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 4 429 3 428 429 380 48.0 1e-105 MTNMINKAQGLGLSLITKLAGSDVLDQLKLRKFLERSLYQGSKAGFRALSQTQKAFKPKQ IPQQRLRQQKKNLFDLSLTEEQQMTSEAMSQFAQEVLLGLAHDADQTAQFPESLWQYVED LGLNYYALPEALGGVAAEQNIVSNLLIAEKLAEGDFSLTAGLLSTFSVINTITRWGSTEV QSMYLPCFAEDSDITATFAVQEATPAFNPYVLKTKASLENDQYFIEGEKTLVILGDLADV FLVSADFNGKPDVFVVQAGDTISIKSTPAMGLKATETATLKFSHTPALRLGATDFDYTAF LDLGNLMWCAMAVGTCEAVKAYCIKYANERTAFGEPISHRQSVAFMIADMAIEIDAMRML ILNAASLAEAGKPFHREAYLARILCAEKSMKIGTDGVQILGGHGFTKEHPVERWYRDLRA TAILHSGLHA >gi|333032548|gb|GL891878.1| GENE 47 50617 - 51990 1552 457 aa, chain - ## HITS:1 COG:YGL119w KEGG:ns NR:ns ## COG: YGL119w COG0661 # Protein_GI_number: 6321319 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Saccharomyces cerevisiae # 63 454 121 494 501 147 27.0 3e-35 MSNQNDKLKSLKTSSMDRRLSIAKASLLAGTRWATASASSLFSSEEEKEKKRKKAMSEQA NYLVSEIGKLKGSIVKIGQMMALYGEHFLPEEITQALNTLNNQTVALDWPAIKPHLQEQL GSKLNDLTIDHEPIGTASLAQVHRATRKSDGLELVLKIQYPGVANAIDSDMSLFKNMLKL TRMVPQTREFDQWFDEVREMMHREVNYHVEAATTRRFAERLKDDERYIVPTIVDEYCTDQ VLCMTFERGVPINSPVMLSLPQERRNQLGEASLEIAVREIFEWGEMQTDPNFGNYLVRLG NGQDIQDKIVLLDFGAIRQFDEHLLSVARNLIQAGYQHDKHAMVQAMTGYEFFDAMPESI KPGMADVFLLATEAFSTPANNPDMPAGLMDEHERYDWKKSQLHSRVMQQASKSMASRYFS VPPKEFMFISRKFIGAYTFMTVIDAKTNVRRMIRNFA >gi|333032548|gb|GL891878.1| GENE 48 52227 - 52505 273 92 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001854 NR:ns ## KEGG: ABBFA_001854 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 92 1 92 92 156 98.0 3e-37 MAMRHRFWDESSDHVLNEKQFLQQTLIEQGIFNNATFDDVKYFFYTLPSIVIVKAHALGF MHDSVKQMVIQHIQANRMHLMQKAELKIQFKM >gi|333032548|gb|GL891878.1| GENE 49 52720 - 53184 465 154 aa, chain + ## HITS:1 COG:ybaK KEGG:ns NR:ns ## COG: ybaK COG2606 # Protein_GI_number: 16128465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 1 152 1 155 159 175 61.0 2e-44 MTPACRLLKSNKIEFSIHEYEHDANAKSFGLEAAEKLNLNVNEVFKTLLVTYEKNYFVAV IPVNHQLNLKKVATAVGCKKLQMANPKDAERLTGYLVGGISPLGQKKRLKTVIDASAQEL SKIYVSGGKRGLDIGVNPKDLAQILTAQFVDVLD >gi|333032548|gb|GL891878.1| GENE 50 53557 - 55341 1232 594 aa, chain + ## HITS:1 COG:all0394 KEGG:ns NR:ns ## COG: all0394 COG4264 # Protein_GI_number: 17227890 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Nostoc sp. PCC 7120 # 2 584 20 605 606 351 34.0 3e-96 MQELANRLAIQNFVNAYMQETGKGYLLSFDQQSSTQQAFSSGLTLLTLPLPSIQAECSVP LSYVSRVGRHRLAALPKMCIDGQWQKFSAGTIVSLLLEELVIESQFKLDAASLLEKWIQS RDALLQFLKQRHNDFDDLVKAGQNFIESEQALILGHSMHPAPKSRNGFVHEDWLKFSPEH AGKTQLYYWLVHQNYIAEGCATEQPISDQVKDAIRWYLSESDLNLLKTHVEFKLLPLHPW QARYLQGKPWFEQLKQTGQLIDIGLRGWQFSPTTSIRTLASFNAPWMVKTSLSVMITNSI RVNLAKECHRGEISYRLWHSDLGKKILKQCPTLKAVNDPAWIALQIDGEIINETICIFRD QPFAVQQQVTCIASLCQDHPNKELNRFNALFDQIAQKNQQTNFKEIALDWFDHFLKIGLA PLMYVYHKYGMAFESHQQNVLLELEDGLPKNLWLRDNQGFYYIEEFATEIVEALPDLLEK AHAVGPKDFVDERFSYYFFGNTLFGLINAIGATGYISEDELLIHLQQNLLQLLEQYPDST LLQGLLFNDSLPYKGNLLTRLHELDELIAPLEHQSVYVQLPNPLYVEQKDVSYA >gi|333032548|gb|GL891878.1| GENE 51 55334 - 56767 963 477 aa, chain + ## HITS:1 COG:BH2620 KEGG:ns NR:ns ## COG: BH2620 COG3486 # Protein_GI_number: 15615183 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Bacillus halodurans # 1 428 6 430 430 350 45.0 3e-96 MLDFIGIGLGPFNLSLASLLHDKSELQYRFFDQREKFDWHAGMQLPNAMLQVPFMADLVS MVEPTSPFSFLNYLKHHQRLYKFYFRENLYIPRQEYNHYCQWVVEQLNHIEFSSHVLDIK PIKGGFDVEVVCNGHHQHYRTRQLVLGVGTTPHLPESLQKIYSKSGTCLHSSEYLQYSSQ KLSGNVVLIGSGQSAAEIFLDLFDRQYMNGRTTPDFHLYWLTRSAGFFPMENTPFGLEHF SPDYMHYFYHLPSGLKAELPAQQANLYKGISSKTIHDIYERLYHRSIGGMPTDVTLAGHH QLQYAELLENQKTKLCFEHRQQNKNYILEADCVIAATGYRYPNPKFLQNLQSLIIRDQAD HWQVASNFKVNYQGEGSIFIQNMEVYHYGVGTPDLGLGAYRAATIANQLVGEELFKLDHS QSFQQFGVNVPAQEEVSVRNIAASKITEFSRPLNKSGPMHHSALGAYARSKLSEHIE >gi|333032548|gb|GL891878.1| GENE 52 56788 - 58227 923 479 aa, chain + ## HITS:1 COG:BH0554 KEGG:ns NR:ns ## COG: BH0554 COG0477 # Protein_GI_number: 15613117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 20 466 10 455 474 251 32.0 3e-66 MERSSVSAAQPHEQSLQRYVLLTVMLGTGTVSLNNSSFNPAIPHLMSYFQVGEVWASWVV VAFLLAMSISLPLAGFLSQRFGKRSIYLIALLGFALASTAGGLFNQFESVLIARALQGFC SGLMIPLSLGLIFSVTPSEQRGSTTGLWGAMIMLTLAVGPMLGALVLVWLNWKALFFINL PVACLALILGYVFLPKEQWDNKQEFDWAGFFFLGSSIVLLLGTLSQIHQIQDLLQPLYGA LLVLSMLLFIRFIFVQKNKSMPLIEPALFATKGFRYSLVICVAQTVGLFIGMLLIPLWIQ HLLKLSPLWTGFALMSSAVVTGICSQPAGKYLDRYGAAKIMSLGLMITVASFLLLAWAPI QNVWFIVFCMILHGLGMGLSYMPSTTAGLNSLRQQQQHLVTQAAALNNLFRRIFAAVAVV IAALYLQLRQQSLPLNTQAIFTSFHTMQEIFVCCAILILCTLPFAWRFPEQYRIDQLKK >gi|333032548|gb|GL891878.1| GENE 53 58239 - 60080 1657 613 aa, chain + ## HITS:1 COG:SA0117 KEGG:ns NR:ns ## COG: SA0117 COG4264 # Protein_GI_number: 15925825 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Staphylococcus aureus N315 # 32 606 9 579 592 389 38.0 1e-108 MGQLHPVLSNTHVIQNALQAWQHPNSDQAKYVEQRVIKQLLQALIFEDIIHSEYDGKNFI IEVQNSQRQTIRYVAAGQRQYSYKLVRLARNQDVFRQDENGHYQIATLNLVIDEILRTIT DAAKVEDFIFELKRTFIHDLQSQACFDHYALPAIQYPYDILESYLMDGHPYHPCYKSRVG FSLQDNVRYGVEFAQPIALVWLAVHQDIVAKKHSEDIEPDLFFKEQLNSQDQELFLQHLS DRDLKADEYIWIPVHPWQWENHLISIFAEEILNGKIVYLGQSQDRYLAQQSLRTMTNLQH PEKPYIKLSMSLTNTSSSRVLAKHTVMNGPIITDWLQRLIKQSKTAQELDFAVLREVYGL SVDFTKLPKSHAQQAYGTIGCLWRESVHQYLREGEDAIPLNGVSHIQKDGQALIAPWLQQ YGVESWTRQLLKVVITPLIHLLFAEGIATESHGQNIILVHKQGWPTRVLLKDFHDGVRYS PAHLAHPELAPELDQLPPEHAKTNSMSFILTDDLNGIRDFSCACLFFVALTDIAIFLNQN FDLPEKNFWQWAAEVIQNYQQQHPEHASRYQLFDVFAEKLRIESLTKRRLFGDRSIQIKF VDNPLAPFKLQVK >gi|333032548|gb|GL891878.1| GENE 54 60090 - 62000 1171 636 aa, chain + ## HITS:1 COG:SA0114 KEGG:ns NR:ns ## COG: SA0114 COG4264 # Protein_GI_number: 15925822 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Siderophore synthetase component # Organism: Staphylococcus aureus N315 # 167 630 132 580 584 256 33.0 1e-67 MNALQPVYQVMDQGILQDFINSLLVETIIPEQFIFDFATAQTALNQHGKNLQEVFKNTSE QFSFVLLHEESRQGLVMFAVQKGITQAWKFANETEVFLLERTNDHVQINVIGIIELFEFI QAIGLFNQCSTDKVQAFYEQLQKCLKQYHLLQQHRVNAHDLLNQSLAHRFRILEQYAGYR DRPYHPLAKLKEGLSQQEYMQYCPEFAQELSIHWVAVHKDKMMFGEGVENIFKQQPSEIF IPRAERYQLKQEMFQRGLNETHIAMPIHPWQFEHLFPKFYADDIADGVCHPLNFISKGMY ASASMRSLLSKNVLEESLKLPIGIKALGSLRFLPIVKMINGEKNQKLLQQAKAKDAVLKQ KLWLCEETQWWSYLPEKQNDRTADNEWLFVEKPTHLAAQRRHIPAELLQEPYQLIPMASL GHTIMGEPAIFDYILQLQHKDINSKQILIEFEKLCTCFFDVNLRLFRLGLMGEIHGQNIC LVLKNGEFDGLMFRDHDSLRIYLPWVEQSGLKDPNYLSPHDFRNTLYHESVEALLFYIQT LGIQVNLGCIVDNLASHYQIEVKDLWSVLAHALQQVIQNLNFQPEILTQLQHLLFEVPEW PYKQLLRPLLEQDTRIGSMPTGIGKTRNPLWYALNC >gi|333032548|gb|GL891878.1| GENE 55 62013 - 62783 325 256 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01677 NR:ns ## KEGG: ACICU_01677 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 256 1 256 256 497 100.0 1e-139 MNTSFKIQAEKCATLPILQQRLKLNVQILPESSTTLDCLLNDDVCRQVLQDFATRIHAKN LTCATSLFVKYWCTSWILPFLYCHVAVLPFVKWDSSALVIDLPEQWYWDRTLQLNQTSFY SVQIIHLQEFNDLIEQLNLLFKQLAKIGRVPYVLLWENVAVRVVQFYHSFTNQNLNPDIQ SRLEQQKQFFKSKAAESFYLTENPFVRLWNGWHPEFNTFMRQKCCFYFQLEEAEQTLCRN CPLRLKEIGKFKDESN >gi|333032548|gb|GL891878.1| GENE 56 62770 - 63387 438 205 aa, chain + ## HITS:1 COG:BH1938 KEGG:ns NR:ns ## COG: BH1938 COG0684 # Protein_GI_number: 15614501 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Bacillus halodurans # 10 191 8 189 210 86 30.0 3e-17 MNQIDTSKALVTAYKEIATSTIGHVLDQGYIAQVFPLRPEDKVVGIVRTVRIESINASGL RQVLMSCQPNEVLVIDARYDLQRACWGEQRSVAAIHCGLAGVVVLGAITDRQALLQLKLP IFAHTTSCLTTRNEGESLVEIDAKIHINHTIVQTGDLIIGDADGIFIIKMDVAQQYLKEF QMLEQNEQNKKNEFFLKNNIDDYYF >gi|333032548|gb|GL891878.1| GENE 57 63551 - 65791 1996 746 aa, chain + ## HITS:1 COG:sll1206 KEGG:ns NR:ns ## COG: sll1206 COG1629 # Protein_GI_number: 16329186 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Synechocystis # 24 746 164 851 851 322 33.0 2e-87 MTPCCLAISAIFAQQAYAETVTQTAEVSENATQKPVTQLQKIVVTATRTPKNIAEIAGTV QSIDQKQIIQQATAGRKVADILAQLVPSLASSSGTTSNYGQTMRGRNVLVMIDGVSQTGS RDVSRQLNSISPGMIERIEVISGATSIYGSGATGGIINIITKRADTSKPLSFETKVGITS SDTFRSDGLAYEVGQSVSFNKGNMDGFLGANFTSRGSQFDGNGDRISLSPWQGSTMDTDT IDVNGRLNFNLNDTQTLSFGAQYYKDKQDTDYGPDYSYLPTTSKSNDATTPTYKAIKGLK LSNPLFTERYAVNSQYQNQDFLGQILNVEAYYRNEKSRFFPYGLSNKSVTFVNQSQSEIE VAGLRSTMQTDLNIANRDMKITYGLDYDWEKDKQFVDILATQYPYLVYTPTGQRKGYGPN TEIQNIGAFVQSDYAVTDKLNLQAGIRYQYIQADTDAYIPSRETTMVPAGSTHDDKPLFN LGAVYKLTDAQQVYANFSQGFSFPDVQRMLRDVSTYTVSTANLQPITVNSYELGWRLNQD DGLNLGLTGFYNTSDKTVQFNNRAAKVVDTDQRVYGAEATISYPFMENYKVGGTLGYTRG QYKDVANKWHELNSFTVAPVKGTLFAEWDNNEGYGVRVQMQAIKGTNKAYKDDRELAAFA TTQDEAFQNAVKNDANSAAQIKGYTTMDVLAHFPAWKGRVDFGVYNVWNRQYRTVFAQQA AVSNANPLLAIPAEGRTYGLSYTFNY >gi|333032548|gb|GL891878.1| GENE 58 65876 - 66169 115 97 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2000 NR:ns ## KEGG: ABAYE2000 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 97 1 97 97 115 100.0 6e-25 MSHLKKQENFNFTYSRIFFICLAAYCYSSWLSLVLAKWLPFAKAENVYFSVFISFIFFIF YIVFTSSILSKLWFWMINSLGVVLLVSYWLLAKWGVA >gi|333032548|gb|GL891878.1| GENE 59 66170 - 67693 1006 507 aa, chain + ## HITS:1 COG:PA0801 KEGG:ns NR:ns ## COG: PA0801 COG3182 # Protein_GI_number: 15595998 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Pseudomonas aeruginosa # 1 426 1 417 506 179 31.0 1e-44 MNFRQIQAILHSWFGIIVLWVIFFIFFTGSIAYFRTEINVWAQPEAISHIQTVPSAQHSA QTAFNYLNQHAPNAKRWRVTVANERMPVNLLQWQDKEGKHQELQNPNTGELLGPVRKTLG GDFFFKLHYTLYPLPSTFGSLVVAVVALILLISLITGVITHKKIIKEFFTFRAFKGQRSL LDLHHITGVITFPFYLVMAFTGLLILFYLVLPWGLSEQYGKAGIPKFYNEMQFTEVAKPR EPSLTEAMQPFNQFMAQMPKRTESGAILDKFEVQKPNTADGMITFDYNYKNIITLNTPQY IFATNTAERLNQPRNLSAIAQLGSSSYGIHLGYFASIWMRFILACLGIIGCVMLVAGALL WQTKRIKEQKKFGYRLVRHLNFFTFLGLPFASAFYLMVNRIIPASFEPRELYEVSAFYIA WLLSLLISFSCSIRKGIIIMLYITAAVLFLIPVISVVLVPEASLLNSLKSVHWSLVGVDL ALILLGLFYLVVLRFYQTKFITLGEAK >gi|333032548|gb|GL891878.1| GENE 60 67690 - 68028 90 112 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01682 NR:ns ## KEGG: ACICU_01682 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 112 1 112 112 143 100.0 3e-33 MSFASLFWAIAAIMQACMLSQFGQKKLQYSWLKSTSRRILYGTTILFLLSSLFLNCSFEG SSVGVLSWFFAIITTAFFLQIIVFYFFRKYFIPIWLMVIVVAIIFSIVELVP >gi|333032548|gb|GL891878.1| GENE 61 68163 - 68783 636 206 aa, chain + ## HITS:1 COG:SMa2406 KEGG:ns NR:ns ## COG: SMa2406 COG1670 # Protein_GI_number: 16263714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Sinorhizobium meliloti # 20 190 23 194 196 129 38.0 5e-30 MLTLSQKLPDYFEYIENDVSYSLRQVQYPQDIPLLHRWMHEPHVIPQWQLNKSEIELKVY FEKMLADDHQRLMIVGINGQDVGYAEIYEGKRDRLARYYKGEDNDLGWHLLFGEKSAFGQ GFLRPTIRLLNFYIFENSPTNRIVGEPDHTVKPYAAVVEDMCYEEQGLIPMPEKTAMLYY CFREKFYDRFFELYQASQQKLQQKAS >gi|333032548|gb|GL891878.1| GENE 62 69115 - 71262 1877 715 aa, chain + ## HITS:1 COG:VCA0102 KEGG:ns NR:ns ## COG: VCA0102 COG0637 # Protein_GI_number: 15600873 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 10 208 7 202 219 126 35.0 1e-28 MLIFHGKPVHGAIFDMDGTMFDTERLRFQTLQQASQELIGQEFSHEYLMQCLGLSATTAE KLAQRLYGVDVPYKEIRKRADEMELEHIRKHGVPIKKGLVQVLERLRKSGLRMAVATSSR RAIAEEYLINANVYKFFDVITCGDEVEQGKPHPEIFLKAASQLHLDANQCLMFEDSENGL TSAHTSKGLTILLKDIKEPNDEMLEKAHFYYDQMYDFLTDLDQFIPVMDMPEMQEPFPQS LNQLTVGIHGFGAIGGGYIAQILSHWDGYTKPKRIIASTRNSLFREAVNAFGTYSIRYGQ FSYDERIENMTIVDSDNEQQMLEMYTHSSLIALCLPEQAIEPESKIIAKGLYARFNSQLE TCIEPLTFLIILNKVGAKYLVMKHLKEALLELTNDEDVTEHILKEHYFCDTVVNRMVSKL SNQNLYRQLRIKHNFLEQHLEDVEQEDQIEIEDCNKLNQEQLNQASIYVDNMRRNFQPGH ILQSMDLILFHSETDMPIYVEKGSPLLEKLRQVVLVDQITDIQLIKNRLWNGVHAMLAWY ASLMGYESIGVAMGDHLVKAFAENLIAEVKQGLAIVLPNYAKDLDRMSQSFLDSCEYAFK DPCQRVARDPLRKLNHNERVMASIAVNICHDLPYKNLLKGAALGYAYAIQFLEIEETKAV EQLQQQIQNLDLSTTQRRQLEAELVQLIQYLFSEQGKQPLDIKLNNTKTTSNQYV >gi|333032548|gb|GL891878.1| GENE 63 71367 - 71993 359 208 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01685 NR:ns ## KEGG: ACICU_01685 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 208 1 208 208 412 100.0 1e-114 MVPTPIRDYPEWHLGRQNYALWYLEINDQKLVHYLDQLRAHFSEFLVEPNHRQYHVTLFI CGFLTHENKVHDDDFCFSGFVQQGEILRKEDIAPFQLKIGSVDSFSSALFVEVQDIENIL SHIRQKLDTVSNEIAALDYCPHITLGLYKKDYSSNLILQKISQLPVQYTQAEFDLKVEHL TFGYYQAQILQGQLYPYQHLFLGDSCCN >gi|333032548|gb|GL891878.1| GENE 64 71981 - 72499 409 172 aa, chain + ## HITS:1 COG:PA1278 KEGG:ns NR:ns ## COG: PA1278 COG2087 # Protein_GI_number: 15596475 # Func_class: H Coenzyme transport and metabolism # Function: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase # Organism: Pseudomonas aeruginosa # 1 171 1 171 173 172 61.0 3e-43 MLQLILGGARSGKSRLAEQTAISMQLAVTYVATAQALDPEMQSRIAHHQNQRPAHWSLVE EPLFLAKTLQKIDRPNQIILVDCLTLWLTNLLLLEDQNIQQFECEQLLKILPTLESEVIL VSNETGLGVVPLGEISRRFVDEAGRLHQALGQIANKVVFCVAGFPMILKGEK >gi|333032548|gb|GL891878.1| GENE 65 72502 - 73557 1164 351 aa, chain + ## HITS:1 COG:PA1279 KEGG:ns NR:ns ## COG: PA1279 COG2038 # Protein_GI_number: 15596476 # Func_class: H Coenzyme transport and metabolism # Function: NaMN:DMB phosphoribosyltransferase # Organism: Pseudomonas aeruginosa # 1 346 3 347 351 328 53.0 8e-90 MNWWLESVQQPNLDAKQQAEQHQLQLTKPTGALGDLEQIAITLASLQSNAHPQVNHPWIT IFAGDHGVVEENISAYPQAVTRQMLQNFTTGGAAISVLAKYHQAHLQVIDCGTVGEAYEY AGVERHCIRAGTANFAKQAAMNADECRAALELGKKSVDTAKANGADIYIAGEMGIGNTCS ASALACLLLNDTAEQLTGVGTGIGADQLRHKIEVIEKAIELHHKHVIGDVFKTLCAVGGL EIAAITGAYIRCAQVGLPVIVDGFISSVAALCAVRMNPQVRDWMLFGHQSAEYGHRRILQ ELNADPILKMNLRLGEGSGAGAALALVKMACALHNQMATFAQAAVSGNKIG >gi|333032548|gb|GL891878.1| GENE 66 73550 - 74149 531 199 aa, chain + ## HITS:1 COG:PA1280 KEGG:ns NR:ns ## COG: PA1280 COG0406 # Protein_GI_number: 15596477 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Pseudomonas aeruginosa # 4 191 3 184 194 148 42.0 8e-36 MAKFRIDLLRHGESQYSHTLRGHLDDELTAKGWQQMQATIEQVSNQPWDVIVSSSLKRCV CFAEQLAKTAELPLLVNHDLKEMYFGEWEGISTQQIYETSPELLANFWQKPSQYCPPRAE TLDQFQTRVLKGFQDLLEHMQKQNLQHALVVTHGGVIKLLACLARQQPLDDLLKMPAELG KLYSLEFSETDGQLTFKLR >gi|333032548|gb|GL891878.1| GENE 67 74274 - 75842 1518 522 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01689 NR:ns ## KEGG: ACICU_01689 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 522 1 522 522 977 100.0 0 MNILFKTTVLAASLLLAACNNNDDQEAQTAPSTNPSKYYQTKTPYQPQQDLKSYEQAPTG FQPVFTELVARHGSRGLSSLKYDLALYNLWKQAKAENALTPLGEQLGADLEAMMKANILL GYGVEGIRQYGYGNETMTGILEHRGIADRLLQRLPTLLNAQAPILVQSSGVDRAVDSAKF FTAELIKQQPQLKDKIVPLSYTNLSSGSVPSVEDGGVDRFKLYFHSLNADEDLAQPLSVS QQKIYDASQAYQDFEENNKDLAQKLDELSKNTQAEKTAQMVLSPIFKADFIKKLGTTGYS FSNTGSFTVTPPKGEQITEKGKGKNTIASAVDAAAYIYELYSISGGMKDELKGINFDKYM PLEAAKFYAEFNDANDFYEKGPSFTESNQVTSEIAQGLKQDLFQQVDAVVNKAQPYKAVL RFAHAEIIIPLATSLDLHNMMQPLPLRQTYNYSTSAWRGEVISPMAANLQWDIYQNNQGS TLVKMLYNEKETLFKPACNYALYTPTSFYYDYIKLKQCYQMQ >gi|333032548|gb|GL891878.1| GENE 68 75949 - 76692 480 247 aa, chain + ## HITS:1 COG:PA1281 KEGG:ns NR:ns ## COG: PA1281 COG0368 # Protein_GI_number: 15596478 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin-5-phosphate synthase # Organism: Pseudomonas aeruginosa # 6 241 10 245 245 160 45.0 2e-39 MAPFWIALQFLTILPIELKTIPTAQQNGRAILFYPLVGLIIGGILFLVTCIFVKLPALLL AAIVFALWIWLTGGLHLDGLADTADAWVGGFGDKLRTLQIMKDPSCGPIGVLSIVIVCLL KFALIYVLIEQHQSLFLICIPILGRVVPSILFLTTPYVREKGLGRSLTDHLPKTASWIIT GFVLLLPLYWEWQGLIAIISFLISLVYLRHVFIKRIGGITGDTVGAAIEIGETVLIFTFV VSYFYLV >gi|333032548|gb|GL891878.1| GENE 69 76768 - 77910 1256 380 aa, chain - ## HITS:1 COG:PA1750 KEGG:ns NR:ns ## COG: PA1750 COG0722 # Protein_GI_number: 15596947 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Pseudomonas aeruginosa # 31 380 6 355 358 505 70.0 1e-143 MVYSVHKTTFSMIEPVTAMTTHSNSVSKPDIDDVNIKSIQTLVTPNELKSELPLSDVASQ TVLKGRETIRNILDGSDKRLFVVIGPCSIHDPKAAHEYADRLKALSEKVKDTLYLVMRVY FEKPRTTIGWKGLINDPDMNDSFNIEKGLRIGRKLLLELNEKGLPCATEALDPNSPQYYQ DLISWSAIGARTTESQTHREMSSGLSSPVGFKNGTDGGLTVATNAMQSVKYGHSFLGLNE DGQVSIINTKGNPYAHVVLRGGNGKPNYDAGSVAEAENALAKAKVSNKIMIDASHANSNK DPYLQPLVLKNITEQILDGNKSIVGIMVESHLKGGRQDIPDNLCDLEYGKSVTDGCIDWE TTEKTLLEMHEALKEVLPNR >gi|333032548|gb|GL891878.1| GENE 70 77974 - 78858 920 294 aa, chain - ## HITS:1 COG:BS_yjnA KEGG:ns NR:ns ## COG: BS_yjnA COG0730 # Protein_GI_number: 16078305 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus subtilis # 8 266 6 254 254 143 35.0 4e-34 MSGAFEFILAGMLVGFCVGITGVGGGSLMTPILIGLFRIEPHIAIGTDLLYAAISKFCGS MVHAKKLNIVWPIVLWLAVGSIPASFGTAWVLEHYLSQSTHYKAVLTMVLGFMLTLTGVS IIFRTRIEKFFNKFRNKENTQTENEQLAVQNKRTYIVIMGIILGVFVTLSSVGAGAFGIM ALVIMFPNLPMIRIIGSDVVHAVLLTLVAGLGHMSAGNVDFMLLMWLLVGSIPAIIIGTL ISSRMPERLIRKILGITLFALGVNFMVHPVKAKPKTAVVQQAVVAEKTGNSTER >gi|333032548|gb|GL891878.1| GENE 71 78991 - 79290 100 99 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1987 NR:ns ## KEGG: ABAYE1987 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 97 2 98 98 128 94.0 1e-28 MFFVFILTLLGMYLLFISTEKYRSPKSTGHFKSLAQKYYSLLRILAFLLFALSGFILIKK YGFSIGFVSWWIFATPLTFLLILWLNPLKPSKTSSKSSI >gi|333032548|gb|GL891878.1| GENE 72 79290 - 80846 1160 518 aa, chain - ## HITS:1 COG:PA0801 KEGG:ns NR:ns ## COG: PA0801 COG3182 # Protein_GI_number: 15595998 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Pseudomonas aeruginosa # 5 431 3 423 506 219 33.0 8e-57 MHKGIRQSMAWLHSWTGLIFGWLVFAIFLMGSLSYYRHEINLWMQPPLAQFEIKQDVAIK TAYQYLQEHASDAKSWYLTVATPESPVNTMYWEKPDGSYGNATLDANTGQELKLSATEGG DFFYRFHYQLFGVPILIGRLVVSLAAFIMLIALISGIITHKKIFTDFFTLRTFKSQRSWL DFHNVSSVIALPFFLTVTFTGLAIFFYLYLPWGMQKLYPENPYQYFNDIRTKTVTESTTP HPAQNLPVEKLLAQLKQRWGNQTLATMSVKNPNTNQAQITFIQQEDHSITRNQAQITLDA TNAKVLGDTRNHSPIATLYAGVYGLHMATFAQPLLRLGLFFSGILGCVMIASGLLLWSLK RQLQSKNSQFHLGHYLVDRLNVATFVGLPCATLAYLYANRLFTVTATTVNYEIYSFFFVW LMSFIIALITKKQYLWQTQLGIFILLSIALPILNISYLLKNNYIQNFSGYWDFVRIDIFF WLFAALAFFIFLKIKPIQYKASDKIQKKLSKLNIEVNS >gi|333032548|gb|GL891878.1| GENE 73 80839 - 81114 192 91 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01695 NR:ns ## KEGG: ACICU_01695 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 91 1 91 91 104 100.0 1e-21 MLYRIKVFYRFLVVFGMGYACMVYLSLGLTEIFHLNLDKPEAIYLAAFISILFYVFFVIV GFCIQSLLRLTILSIALFALFFIVTRTVGYA >gi|333032548|gb|GL891878.1| GENE 74 81201 - 83366 2227 721 aa, chain - ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 19 721 17 729 729 388 35.0 1e-107 MRIIYIIFNLMNIPPRPFKLSVIACAICYANLTYAQDTQVQALQTIQVKASNAEQSSEQT KAYNVKNSSSATKLNIEAKETPQTINVVTRQQIEDFGLTSTRDVLRNTPGVTVSNQETER TTYMARGFEISNILTDGVGFPLSGYNYNNTNPDTYFYDRVEVVKGADSLTNAFGDPSATI NNIRKRPTQEFQASGGVSYGSWDTQRYEADVSGSILPSGKVRGRIMGYEQTGDSYLDRYS AEKNGFAGIVEADLTDSTLLTAGYSQEQNKPNANNWGALPLLDANGKQISYDRSYNPNPD WAHWDNETQNAFVELKQKINDQWNAKLTYNYLDTKHNSRLLYYYGYPKADGSGVSLTPWG GQEHQEKHAVDFNLEGTYKLFNREHEATLGYSYVRNHQQDKQSTGTINDSNVIKSTTTDW ASWTPQSITWSDFTEAANYKQNINSIYAATRLHLNEDLKLLLGANYVQAESKGESYSSPM SYSESKVSPYVGLTYNFTPEYTGYMSYTSIFRPQTGIDKDTNQALKPIEGKSYEMGVKSS WLDDRLTGTLSVFKTEQNNYPLRNSDGNPLNRKVPTSDLESQGVEVGLSGQITDNVNLSF GYAQFSIKDTKNGGEARTYNPNQTLNLLTTYTPPVLPKLKVGAGLQWQDGIKLYDSNVNG TIKQDAYALVNLMASYEVNDHITLQANGNNIFDKKYLNSFPDGQAFYGAPANYTVAVKFK Y >gi|333032548|gb|GL891878.1| GENE 75 83558 - 84733 1241 391 aa, chain + ## HITS:1 COG:VC2247 KEGG:ns NR:ns ## COG: VC2247 COG0763 # Protein_GI_number: 15642245 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Vibrio cholerae # 3 389 2 377 379 333 45.0 5e-91 MANRKLKIGIVVGEVSGDTLGVKLMRSFREQGIDAEFEGIGGPQMIAEGFNSYYPMETLS VMGIVEVLKDLKKLFAVRDGLINQWTQHPVDIFIGIDAPDFNLRLSKSIKEKNLPIKTVQ YVSPSVWAWRQGRVHGIKQSIDLVLCLFPFEKVFYEQYEVPAAFVGHPLAKQLPLENPIQ IAKQELGVDENQKHIALLPGSRKGEVERLLPMLLGAANILHTKYPDIQFLIPAINDARKQ QIEQGVEQLAPQLKAKIHILENTDSESKIGRMVMNASDIIALASGTATLEAMLMHRPMVT FYKLHWLTYLIAKFLVKIPYYSLPNIIAGKKVIEELIQADATPENLAAEIEKLMNVETAQ IQVMQHLTMHKQLISGNTEDPVQAILQCLNS >gi|333032548|gb|GL891878.1| GENE 76 84730 - 85377 536 215 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01698 NR:ns ## KEGG: ACICU_01698 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 215 1 215 215 396 100.0 1e-109 MSRSRRSDGDLTKTKIIEAAGPLIAQYGFAKTANKTIAKVANVDLAAINYHFDGRDGLYQ AVLMEAHAHYLDEQYLLELVESTYPPEEKLSLLLETLLHKLTEKDVWHGKVFIRELFSPS EHLLNFIELTGMRKFFLIRKLISQVANLDENDPAVLPCILSVMTPCMMLIIAGPNAQAPE PLKNIAQMPLHDLVEHFKKFSLAGLKAISQSNLKN >gi|333032548|gb|GL891878.1| GENE 77 85496 - 86518 1228 340 aa, chain + ## HITS:1 COG:STM0818 KEGG:ns NR:ns ## COG: STM0818 COG0845 # Protein_GI_number: 16764181 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Salmonella typhimurium LT2 # 1 328 1 322 331 178 38.0 1e-44 MNKKVIAGILVVIAVVAIGFWVWGYNHKKQLDNNVLTLYGNVDIRQVSLAFEQSGRIQKL LVQEGDKVQAGQVLATLNTNALQIQAKQAQAQLKAQQEAIVKQEVGARPEEITQAKAQLA SAQAELDKTNKNLQRLQILVSSTDGRAISQQELDYAKSNQHSAEAAVRERQANLELLIKG ARKEDREATRAQYEVTKANLDLINYNLTQAELRSPVNAVVRARLQEVGDMTTAQKAVYTL ALTNPKWIRVYVNEQDLSSIKMGDTAQVIRDAYPNQPMNGKIGYISSVAEFTPKTVQTEE IRTTLVYEVRVYVHDPNDQLKMGQPVTVNVPLALSEKAYD >gi|333032548|gb|GL891878.1| GENE 78 86511 - 88268 365 585 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 340 569 5 238 311 145 36 1e-33 MIDSKAVVQAHNLFMTFKAENKNSADISAIVDLNMQIKKGELAALVGPDGAGKTTLLRLI AGLYKASSGSLHVLGFDIEKHPQVVQDRISYMPQRFGLYEDLSVQENLNLYADLHGVPKN VRNQRFKRLLEITDLTQFTQRLAGQLSGGMKQKLGLACTLVRSPELLLLDEPSVGVDPLS RRDLWIIIEQLVQEENLSVIISTAYMDEAEKCAYVYIMHEGKILRQGSPEQLKALVHEQT WQIKPSEQIKTRIVQAQLLGNSGEIIDAVPRGEQVNFISRQKELSTNILPLGLVANRRPP ELEDAFMMLLQQNQKQQISISQQAFRSEQNNNSQSDQAVIVVKDLVRTFGDFTAVANTSF TVQRGEIFGLLGPNGAGKTTTFRMLCGLLPASSGYLEVAGKNLRTARAEARAKVGYVSQK FALYSNLTVLENLKFFGGAYGLSGKKLNQQIDKALQQYDLKPQIKSGDLPGGYKQRLSMA AALLHEPEILFLDEPTSGIDPLARRLFWYSIGKLANQGITIIITTHFMEEAEYCDRIAIL DAGKLLALGSPQQVRELASKDKHIVDMNEAFIAIVEQARALRHAG >gi|333032548|gb|GL891878.1| GENE 79 88279 - 89403 736 374 aa, chain + ## HITS:1 COG:ECs0871 KEGG:ns NR:ns ## COG: ECs0871 COG0842 # Protein_GI_number: 15830125 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Escherichia coli O157:H7 # 6 342 8 345 377 232 37.0 7e-61 MSFAFWSRLKALVRKETKQLLRDKSSLGIGLVLPVILILLFGYGLSFDLNQARVGVVVDQ SSPQVNQVLAGLNGSRYLTSLEFHNLPEAEQAIRNGKIDAILHLPSDFASQTQQGNAKVQ LLLNGRSTTIATALEGYVAGALATAPSIQIDRSPILASASAVKIEQRIWFNESGNSTWFL VPGLMVLILTLIGAFLTGLVIARERERGTLEALFVTPVRPFEIVLAKLIPYVVVGMIDIV ICIVAAHFIFEVPMRSSLFSILFASFLYLIVSLLLGLTISGFAQSQFQASQIALLASFMP ALMLSGFVFDTRNLPLVVQIISQLLPATHFMVLIKTLFMGGDDWKLWFKECGILLGYIVV LICAVNFSLKKRLR >gi|333032548|gb|GL891878.1| GENE 80 89408 - 90526 770 372 aa, chain + ## HITS:1 COG:SMb21204 KEGG:ns NR:ns ## COG: SMb21204 COG0842 # Protein_GI_number: 16264618 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Sinorhizobium meliloti # 8 371 2 369 370 273 40.0 5e-73 MWQQLITWLKQLSFLVKKEFLTIFSDPANRAILFVPALMQALLFGYAATYDVNHVDYAIL DQSNGQVSHELISKLDGSGIFKRAATLEYTEQIKQVIDNRQALLVITIPNDFESKLNNNQ SSPIQIIVDGRNSSTAMVAGSYLSKIIGQFNQQKFNSALPISLETRTWYNPNQESRWSLM PALIAALSMMQTLLLSALSVAREREQGTFDQLLVTPYTPLQIMIGKALPPIFVGLMQSTI ILLIILFWFKIPMNGSIGLVYFGLFSFNVAVVGVGLSISALSLNMQQAMLFTFLLIMPLM LLSGLLTPVENMPKALQVATYANPLRFGINLVQRVYLEGASFAQVKLNFLPMIVLGIVTL PLAAWLFRNRLS >gi|333032548|gb|GL891878.1| GENE 81 90575 - 91444 935 289 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1982 NR:ns ## KEGG: ABAYE1982 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 289 9 297 297 606 99.0 1e-172 MELQGICHKMHAGLKDASVTDQQTTKANVEYKFVLDRSEIDLPFNLGQELEIEWTGNIYC TSCGAKTPKSYSQGHCFKCFKTKAECDLCIMKPETCHYHLGTCREDDFAHSVCFQPHIVY LANSSALKVGITRVSHMPGRWLDQGATQALPILKVGSRRLSGQLETMFGSLIADKTDWRK LLKGEAEPLNLIEQRDQLIEEFAPKIQTIREEFSQNLEFNETVELLENELPREFVYPVEQ YPEKIKSLNLDKTPKIRGVLQGIKGQYLIFDIGVINIRKYTGYELIVRA >gi|333032548|gb|GL891878.1| GENE 82 91484 - 91945 397 153 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001826 NR:ns ## KEGG: ABBFA_001826 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 153 1 153 153 287 100.0 9e-77 MAEQNVITSMLDDLSNEQPIHTALCIGQKIDQNNAIQWHYFTVTELLSLPFTQRYDLGFV LFDTDEMQDISDVQKSQLLVKLRDLLAKRIVVVSKRSDEQLLRSLGFTQLIDKTSHDSDF ALWQFNILTYKHVPDWFNSKFWANPENWNKFRW >gi|333032548|gb|GL891878.1| GENE 83 92045 - 92635 929 196 aa, chain + ## HITS:1 COG:yidB KEGG:ns NR:ns ## COG: yidB COG3753 # Protein_GI_number: 16131566 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 86 184 25 121 135 60 36.0 3e-09 MTNLSNIVEVLAKQALGGNQQASGQGGLGGILGSVLGQMGGNTSSGAQGGLGGVLGSVLG QVTGNNNTPQTGGGVQSLLIAVVPLILGWVQQQGGLQAALEKLKGAGLGSQVQSWVDPNQ SNSEVPTQQLQSLFNPADIEQVAQQAQAPKEQVYGAIASVLPQVIDSLTPQGESTDHQEA NQDIQNVMNLVSGFLK >gi|333032548|gb|GL891878.1| GENE 84 92739 - 93845 1289 368 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001824 NR:ns ## KEGG: ABBFA_001824 # Name: not_defined # Def: outer membrane porin protein precursor # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 368 1 368 368 624 100.0 1e-177 MKKLLLAAAVATLSVNAVQAAPTLYGKLNVSINQVDNKNFDGKSDVTEVNSNSSRIGVKG EEKLTDKLSAVYLAEWAISTDGSGSDTDLSARNRFIGLKTEGVGTLKVGKYDSYFKTSAG SNQDIFNDDTRLDITNIMYGENRLDNVVGFELDPKLLAGLTFNIMAQTGESTSDSKKGET GKDSKNDSFDSVSTSLGYENKDLGLAIAAAGDFGIKGKYAAYGLKDVYTDAYRVTGSYDI AKSGFVVGALWQHAEPTDDLTAYGQTYKSDGSIDKAGKAYRGLEEEAYAVTAAYKIPNTK LKVKAEYASAETQVSGQADRKIDLYGLGLDYQINKQARFYGIVAQQKRDWLNDDDKQTVV GTGIEYNF >gi|333032548|gb|GL891878.1| GENE 85 94100 - 94513 531 137 aa, chain - ## HITS:1 COG:BMEI0817 KEGG:ns NR:ns ## COG: BMEI0817 COG0537 # Protein_GI_number: 17987100 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Brucella melitensis # 3 137 14 149 149 140 53.0 5e-34 MAYDDQNIFAKILRGELPAIKLYEDDQVLAFMDIMPQADGHALVIPKTPAVTLLDLPPEA AAYTIQIVQKIAKAMETALNLDGIVLMQLSGAAAGQTVPHVHFHLIPTNVHQLGKHAAQL GDQDKIKALAEKIKAAL >gi|333032548|gb|GL891878.1| GENE 86 94532 - 94801 303 89 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001822 NR:ns ## KEGG: ABBFA_001822 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 89 1 89 89 151 100.0 1e-35 MNKLMVAVFAGMVTLAGFSAQAATPEQECQKLQDDYNLIYASKGFCFKDQDAKEKYGNEN CHTTKPKFSDKEQQRLDAIKERQKELKCK >gi|333032548|gb|GL891878.1| GENE 87 95066 - 95491 206 141 aa, chain + ## HITS:1 COG:PA2706 KEGG:ns NR:ns ## COG: PA2706 COG3791 # Protein_GI_number: 15597902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 5 122 4 123 131 78 34.0 5e-15 MSNIGSCLCHKVKFSVLCEIKTVYHCHCSLCRKQTGTGANAATLVKENQFNWLMGKEYVA TYKKETGFTSSFCNRCGSPVPNKINGTNYMWIPLGLLEQPFKPDLKLNFCIESKHDWVVL GDAHKNFAHLPELEEFLKYFE >gi|333032548|gb|GL891878.1| GENE 88 95622 - 95822 329 66 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001820 NR:ns ## KEGG: ABBFA_001820 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 66 1 66 66 77 100.0 1e-13 MIDEEKPLNFEDDDEPLDFEDEEFIDDKKEDEMYNSITKDGSSVDPADDGTRHIRPEDGD PIEIDE >gi|333032548|gb|GL891878.1| GENE 89 96321 - 96545 216 74 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01711 NR:ns ## KEGG: ACICU_01711 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 74 1 74 74 149 100.0 4e-35 MKRLLLVLATGFGLDGCASLTQKADENYITKSPVTPVNTAFNGTKVLEHGIFTEQDIADM PERSSINSRYKISF >gi|333032548|gb|GL891878.1| GENE 90 96724 - 97098 286 124 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01712 NR:ns ## KEGG: ACICU_01712 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 124 1 124 124 214 100.0 1e-54 MKNVIILTSILLLSGCTINSKLLSPAKSDDEKIIVEAEKYKQQYQKKIFKIWNVPPSSVG MSASVKVFLSDTGEIEQIIFLDKEDQKFKSSIEKAIWRASPFVLPFNPEVRKQVRKFNIK FTAK >gi|333032548|gb|GL891878.1| GENE 91 97273 - 98040 742 255 aa, chain + ## HITS:1 COG:ECs0206 KEGG:ns NR:ns ## COG: ECs0206 COG0500 # Protein_GI_number: 15829460 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Escherichia coli O157:H7 # 3 245 5 247 256 234 43.0 9e-62 MLNQHEINLKQYQNKSLSYLNSTAHSEGVEFDKFIKEIDEYPNAVVLDLGCGGGHVAYNV ARHADLVFAYDLSHEMLDTVSKAANARKIKNIFVQQGIAEDMPFTDEQFDVIISRYSAHH WQHVPTAMKEINRVLKPNGTVIFVDIISSSFPILDTFLQTIEVIRDPSHVRNYSIKDWVH FIEDAGFELTTLEKQTLKLDFDSWVQRMKTPEDQIKTLKYLQENAADVVKKYFNIQKDGS FESKVGYFVFKKLSF >gi|333032548|gb|GL891878.1| GENE 92 98121 - 99206 872 361 aa, chain - ## HITS:1 COG:slr1830 KEGG:ns NR:ns ## COG: slr1830 COG3243 # Protein_GI_number: 16330022 # Func_class: I Lipid transport and metabolism # Function: Poly(3-hydroxyalkanoate) synthetase # Organism: Synechocystis # 33 357 57 377 378 95 25.0 2e-19 MKRLKSLVSEQSQIKHLSTRLFRPQTLVLSQSTPFEVIGEFNQTRVRYYAATEKSFREPL VFVAPLAINMAIYDLYPYRSLIKYFQNAGFDVYLVDWGRLGFKDRHLNFLSFIEDFIPKA IELVRTHSGSDQVSLHGWSMAGIFVTLYTAHNHPNYVKNLIVLGSPIDSYASGYIGKLYR TINNTIARNKKLQERIYSGLPKRLIHTPGILNSLGFKILDPKGWFDGHIQLLKNLNNLQF VQEHATLSSFLNNMIDYPGGINQDMLFNVWLQNPLIQGSIQLKDKKIELKNIDCSLLVGA GRSDQLVTADAAQPLSQLTSSQDVTFTLIPGGHLGLMSSQASAQEFWPKLATWLSERSTK I >gi|333032548|gb|GL891878.1| GENE 93 99316 - 100527 1381 403 aa, chain + ## HITS:1 COG:PA3107 KEGG:ns NR:ns ## COG: PA3107 COG0626 # Protein_GI_number: 15598303 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Pseudomonas aeruginosa # 14 400 13 400 403 483 62.0 1e-136 MTSKGEHLMNQSDDLEYQLDTLAIRTGHTRSFEGEHGEPIFLTSSFVYENAAEAAAKFSG QVQGNIYSRFTNPTVSMFEKRLAALDGAERAVATSSGMGAILSIAMAYLKAGDHVICSRA VFGSIVALFEKYIAKFGVDITFVDLSDLNAWKNAVRPETKLLFVESPSNPLAEIADIQAL ADIAHANGALLAVDNSFCTPVLQQPLKLGADLVIYSATKYLDGQGRALGGAVVGNHQLLE EVFSVVRTLGPSMSPFNAWIFLKGLETLRLRMKAHCENAQKLAEWLSTHEKVEKVYYGGL PTHEGHELAAKQQNGFGGIVSFVVKGEREGAWKVIDNTKFISITGNLGDVKSTITHPATT THGKLSVEAKEAAGIQEGLIRVSVGLEDINDIIGDISRGLDLI >gi|333032548|gb|GL891878.1| GENE 94 100705 - 100941 355 78 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001814 NR:ns ## KEGG: ABBFA_001814 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 78 1 78 78 135 100.0 4e-31 MLKPIIILVAIGAIGLVGYKVFAQKDEPTQINETVLLINDANKSVEEADHTIEKANASFQ KIPLNEYKPDNSTLQASQ >gi|333032548|gb|GL891878.1| GENE 95 101207 - 101536 490 109 aa, chain + ## HITS:1 COG:PM0205 KEGG:ns NR:ns ## COG: PM0205 COG0718 # Protein_GI_number: 15602070 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 6 109 10 109 109 92 52.0 1e-19 MNINMLMQQAQRMQKDMESNIKKAKEELAQTEVHAEAGGGLVKVTMTGRYIVKRIEINPE LLQDEPDMIEDLIAAAVNDAVRQAEVVSEEKMQKANSGMGLPPGLAGMF >gi|333032548|gb|GL891878.1| GENE 96 101546 - 102142 609 198 aa, chain + ## HITS:1 COG:ECs0525 KEGG:ns NR:ns ## COG: ECs0525 COG0353 # Protein_GI_number: 15829779 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Escherichia coli O157:H7 # 8 198 9 200 201 206 55.0 3e-53 MFSDRFEQLVQALRILPSVGPKSAQRMALHLLMKNREGAFALAHALHEASSYIHECSVCH SLTEHEICDICASTERDDQLLCVVESPADVMAIEQSGSFRGKYHVLGGHLSPLDGIGPEE IGIPYLIQRLSQGTIEEVILATNATVEGQATAHYLVEATKHLPIHMTRIAQGVPQGGELE YVDSHTLSQAVHNRMRMK >gi|333032548|gb|GL891878.1| GENE 97 102448 - 103572 1160 374 aa, chain + ## HITS:1 COG:PA1294 KEGG:ns NR:ns ## COG: PA1294 COG0349 # Protein_GI_number: 15596491 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Pseudomonas aeruginosa # 3 362 7 368 374 158 31.0 1e-38 MFQFIQQQTELVDVLQQMDQCSTYGLDTEFIKVDTLWPKLGVCQVNVNGNVYLLDGVSLD LSEFWKKIFLAQQNIFHACGEDIDLIYHYADEQNLLNVFDTQVGLSFLGHGLQVSYQGAL KLCLEIDIEKDQTRSDWLARPLSPQQLCYAANDVLYLMQLANHIKDQLKQKGLYEYVLED CSSLTKEIISETPTPLLYTDVGNYRHSRRQLMQLQNLSEWREEVVRATNQPRSFILRNST MIDLVEKNPRNSFQLSQVKDIRPNVVREYGKIILDLLKDLPVEGHWPAKIAKPFKITSKE TLNKMDALIAKAIEQTSIPKEVLLRKKWLNAIHQHVLTKGDEQDLPDYLLGWRYELLTKP LIQLFKEERASLLF >gi|333032548|gb|GL891878.1| GENE 98 104075 - 104341 316 88 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01721 NR:ns ## KEGG: ACICU_01721 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 88 1 88 88 146 100.0 2e-34 MTNSFNAEQARKNAKDVKIDQALLLEKILSGTEEISKEGKRRAVFQFPIDTLHPEHITQV EEELKIRGFNVSTNIEQSGTTVNIEVSF >gi|333032548|gb|GL891878.1| GENE 99 104478 - 104813 284 111 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01722 NR:ns ## KEGG: ACICU_01722 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 111 1 111 111 195 100.0 6e-49 MNFQTILSSFKNQSTGTDAFKNLKSACEHHLKHSSDLNEKAVIYLIYGFARSYVILYEGE AVTTEFAQASKEMLVNYMNRLNEALRTQDNHIILNTLNQVSNDYMQGSRIF >gi|333032548|gb|GL891878.1| GENE 100 104886 - 105050 299 54 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001808 NR:ns ## KEGG: ABBFA_001808 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 54 1 54 54 61 100.0 1e-08 MSRGDKSSYTAKQKRQAKHIVESEVDRGHSQEEAERIAWSTVNKQDGGGKKKSH >gi|333032548|gb|GL891878.1| GENE 101 105493 - 105798 387 101 aa, chain + ## HITS:1 COG:VC1957 KEGG:ns NR:ns ## COG: VC1957 COG3100 # Protein_GI_number: 15641959 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 1 84 11 84 102 61 42.0 3e-10 MHCDIYRSSKKDEMYIYIARPNYPDETEQADPFEKVPEAVLQAFGRATFVMHLELAPTRK LARVNVLHVLDSLQTKGFFIQMPPEGLINPNAVEPEGLRGA >gi|333032548|gb|GL891878.1| GENE 102 105791 - 106177 349 128 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001806 NR:ns ## KEGG: ABBFA_001806 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 128 1 128 128 221 100.0 5e-57 MREDQAGILNQLLSSLDAIPEEIIALTAYGVGAIIALWCWWRLMRRLPTTLGAISWLVVF AILVTPTVSEGPNASVAPAIFGLLFGVLTKDSPLIWSNLSLILFVIGLGLVIGYCWSKYI TNKSMRSI >gi|333032548|gb|GL891878.1| GENE 103 106207 - 107058 898 283 aa, chain + ## HITS:1 COG:PA2707 KEGG:ns NR:ns ## COG: PA2707 COG0714 # Protein_GI_number: 15597903 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pseudomonas aeruginosa # 8 283 3 278 281 434 77.0 1e-121 MSADTQHFTGTDQYIATDSLKLAVKAARALQKPLLVKGEPGTGKTLLAEQVAESLGLKLI TWHIKSTTKAQQGLYEYDAVSRLRDSQLGDDRVYDIKNYIKPGKLWEAFTSEERCVLLID EIDKADIEFPNDLLHELDKMSFYVYETGETITATQRPIVIITSNNEKELPDAFLRRCFFH YIEFPDEATMREIISVHFPNISATLVNEALQVFFKLREIPNLKKPPSTSELIDWLSLLMA DDMPEDVLRNRDTSKAIPPLYGALIKNEQDVQLLERLAFMSRR >gi|333032548|gb|GL891878.1| GENE 104 107074 - 108261 1367 395 aa, chain + ## HITS:1 COG:PA2705 KEGG:ns NR:ns ## COG: PA2705 COG3825 # Protein_GI_number: 15597901 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 395 1 392 393 436 54.0 1e-122 MFVRLFYTLRKYGVPVTTRELIDLNRAVSEGLVFADQEEFYQLAKTILVKDERFFDKFDR AMKDYFDGIETFDIDELLKQVHKLPKDWFDLELLEKHLTPEQRAELQKAGSLEELMKMLE ERLREQHKKHQGGNRMVGTGGTSPFGAFGDHPEGIRIGGPGRKRSAVKVWEQRKYQNLDD DQVLGTRQMQIALRRLRKFARHGAAEELDVDGTIRETAKQGILDVQMVPERRNRIKVLML FDVGGSMDAHIAQCEKLFSAAKTEFKTLEYFYFHNCLYDYVWKDNYRRTATRMNTWDLFH TYGRDYRVIVVGDASMAPYELKSVGGSVEYMNDEAGEVWLRRLRQHFDKTAWLNPETEGY WHYTQTIGWIKEIFENHMYPMTLKGIEDLTRYLSR >gi|333032548|gb|GL891878.1| GENE 105 108298 - 109503 1341 401 aa, chain + ## HITS:1 COG:PA0036 KEGG:ns NR:ns ## COG: PA0036 COG0133 # Protein_GI_number: 15595234 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Pseudomonas aeruginosa # 11 400 8 397 402 442 53.0 1e-124 MQHQINGIALPNEQGFFGEYGGQFIPPHLKEAMDEINVAYEEIRHTPEFQNELADLFANY VGRPSPLFYAKRLSEQLGGAQIYLKREDLNHTGAHKINHCLGEALLAKYMGKKKVIAETG AGQHGVALATACALVGIPCEIHMGQVDIEKEHPNVVKMKILGAHLVSVTRGTATLKDAVD SAFEEYLKDPKNFIYAIGSVVGPHPFPKMVRDFQSIIGKEIKEQTHQRFGKNPDYVVACV GGGSNAIGAFTAFLNDSDVKLVGVEPAGHGLDTNMHSATLTLGKPSQIHGMACYVLENEA GEPLPVHSIASGLDYPGVGPQHSFLKDLGRVEYSIATDQECLDAFMTLSRVEGIVPALES SHAVAWAIREAPKLSKETMIVVNLSGRGDKDSDYVAEKLKL >gi|333032548|gb|GL891878.1| GENE 106 109740 - 110744 1712 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169796031|ref|YP_001713824.1| putative adenine-specific methylase [Acinetobacter baumannii AYE] # 1 334 1 334 334 664 99 0.0 MERPTISPEHLQEAAENLSTIRDFIRFGVSALRQYDAHLGQGTEDYFAESSALVLQTLSL EWSADSEILDAKLLPSEKAEFLSLLERRINERIPTSYLLNLAYFFNKPFYVDERVLIPRS PIAELIEQRFAPYCLDENGQMREALNNLPENTKPKTPQRILDMCTGSGCIAVALAYAYPD AEVDATDISKEALEVASINVEHHNKQYQVALLESDLFEKIPAENQYDLIVSNPPYVDAED MADLPEEFLHEPELALAAGQDGLDLVRKMLAQAADYLTEDGLIVIEVGNSEWAMRQNFNT VDFNWLTFQKGGSGIFALTAEQCRRYRKLFEEQV >gi|333032548|gb|GL891878.1| GENE 107 110757 - 111848 1445 363 aa, chain + ## HITS:1 COG:VC2116 KEGG:ns NR:ns ## COG: VC2116 COG0082 # Protein_GI_number: 15642115 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Vibrio cholerae # 1 355 1 355 361 488 70.0 1e-138 MAGNSIGQLFRVTTCGESHGVGLMAIVDGVPPGLALTEEDLQKDLDRRKPGTSKFATQRK EPDQVEIISGVFEGKTTGTPIGLLIRNTDQKSKDYGNIAQTFRPGHADYTYTQKYGFRDY RGGGRSSARETAMRVAAGAIAKKYLAEKFGVVIRGHVTQIGNEVAEKLDWNEVPNNPFFC GDVDAVPRFEALVTSLREQGTSCGAKLEILAEKVPVGWGEPVFDRLDADIAHAMMSINAV KGVEIGDGFAVAGQFGHETRDELTSHGFLANHAGGILGGISSGQTIRVAIALKPTASITT PGKTINLNREDTDVLTKGRHDPCVGVRATPIAEAMLAIVLMDHFLRHRAQNADVVPPFAP IEP >gi|333032548|gb|GL891878.1| GENE 108 111945 - 113174 1207 409 aa, chain - ## HITS:1 COG:sll1673_3 KEGG:ns NR:ns ## COG: sll1673_3 COG2199 # Protein_GI_number: 16329397 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 223 395 1 173 176 184 52.0 3e-46 MKLQGSNILGQEQIDLLTTRGLNFVWFPKQLETIYRFQYQNGAAYEFRYRAPIILILYLF LSFGIYQVLPTEQVLSWLSYYSWVGIIVLIAWILSFIKKLNQWFDYYVGIGSSAAVAITF ILINVLENGQDNVLFHAAMMYAIVIIYGAVGMRFYTAIIAGWVGGLIGILVSTYLNGDID WTFLNRTYTFSSFLGMTLAYATDRQHRENYLQNCMIELNRIELMQQAQQLSLLSQQDALT GLANRRYLDETLDNEWRRALRHETPLTIMMVDIDFFKPYNDSLGHLKGDQCLKDIATAIS SIAARSGDLVARYGGEEFLLLFPMTNAQQAKIQAERLMNAIKKIAIVHPCSSVSPYVTIS VGVATTIPRLNDSISAFVSRADHALYQAKTNGRNQYQIALNEEQIVDLT >gi|333032548|gb|GL891878.1| GENE 109 113495 - 114247 718 250 aa, chain + ## HITS:1 COG:PA0862 KEGG:ns NR:ns ## COG: PA0862 COG5424 # Protein_GI_number: 15596059 # Func_class: H Coenzyme transport and metabolism # Function: Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C # Organism: Pseudomonas aeruginosa # 19 250 20 252 260 127 33.0 2e-29 MTALNQYGMSLEITPHNGWSQRFWEDLLPVKERVSKHPFFTEMANGGLSLESFRYALLNF YPLVAHFPSYMAGALAKATAFAEPGVTETRDWLIQNIKVEERHLQWYRDWARGFGLTVEQ LDSVRPPASMNAVNHFLWNMSHRGNLAECLAATNLAIEWATGDWSIQVYKGIHAYTDHPE VTIDKRSLAWLRAHAHYDDLHPYEAMELIKRLCNERPDWQQKAFHAAEEGLRYYELALDD CYRVQLQASA >gi|333032548|gb|GL891878.1| GENE 110 114294 - 115433 837 379 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01733 NR:ns ## KEGG: ACICU_01733 # Name: not_defined # Def: putative transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 379 1 379 379 766 100.0 0 MDMSKQLLLPSTDNLPSFFRPETISETPCLGKKPSLDLDAAPIFDLDQEWQHSLFGRSIQ ECHRNLMHIAEDADMAIGVTDPHGTLLWTWSSTPMRSSAEQVHFVEGGQWSTQAVGQNAI GLALNTHSASCVYSHENQMNSVRDWVCYAAPITDANTGQFYGIMNLSTKYQKHNSLGILA VERCADIVKQAIQLHQKNILYIKALGTPKVQYNQHGLTLTQRQIEILCILALCPEGINLE ELHYALYGDRPVSTTTLKAELSQLRNLIPDVIESRPYRLNCEIQCDFLMAEQALNLGFTA TTLTLYRGSFLAKSESPFLCAWRDCFDARLSHVIYKIDDVDQLLRVVSRVPDRVDAVERL LELLPEETPYRAKLLKLLE >gi|333032548|gb|GL891878.1| GENE 111 115591 - 116577 879 328 aa, chain - ## HITS:1 COG:PA3996 KEGG:ns NR:ns ## COG: PA3996 COG0320 # Protein_GI_number: 15599191 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Pseudomonas aeruginosa # 6 314 15 323 327 424 61.0 1e-118 MDLKRQIETGIKLRGIDKVSRIPIKILPTEELPKKPEWIRAKITDFEEIQRIKNLLRQQK LHSVCEEAACPNLPECFGGGTATFMIMGDICTRRCPFCDVAHGRPMPLDENEPKHLAETV ANLNLKYVVITSVDRDDLHDGGAAHFVKCIEEIRNRCPDTLIEILVPDFRGRLETALSTL SLSPPDVFNHNIETVPRLYKAMRPGSDYQHSLNLLKRFKKYCPDIKTKCGLMVGLGEIEA EVIALLNDLKDHDVDLVTIGQYLQPSKSHAPIHRFVNLQEFERYTQHGQRLGFKNIWSAP MVRSSYFADRQYFGESAPKPFSREDVLS >gi|333032548|gb|GL891878.1| GENE 112 116942 - 117904 1278 320 aa, chain + ## HITS:1 COG:BS_acoA KEGG:ns NR:ns ## COG: BS_acoA COG1071 # Protein_GI_number: 16077873 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Bacillus subtilis # 1 320 9 328 333 348 57.0 5e-96 MQLTEEQLLAAYKRMRDIREFEDRLHEENTNGDIPGFIHLYSGEEAVAVGICENLTDKDY ITSTHRGHGHCIAKGCDIHAMMLEIFGKDDGLCRGKGGSMHIADLDKGMLGANGIVGGGP PLAIGAALTAKTLKTGGVGLSFTGDGGSNQGLTFEAMNMAVVLKLPVIFVFENNGFGEGT GHDYAVGSKDIAGRAAGFGLPAVKVDGTDFFAVYEAAQTAIERARRGEGPSVIETITNRF YGHFEGDPGLIRSKEEVEFIKENKDPLKIFREKVKGKIDEAKLDEIDAASKANVDDAVAK ARAAAYPKPEQLLTDVYVSY >gi|333032548|gb|GL891878.1| GENE 113 117918 - 118937 1484 339 aa, chain + ## HITS:1 COG:PA4151 KEGG:ns NR:ns ## COG: PA4151 COG0022 # Protein_GI_number: 15599346 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Pseudomonas aeruginosa # 5 339 6 335 339 387 57.0 1e-107 MPNKSFRNAIKEAIESEMRRDPTVFVVGEDVRGGHGGKNTEENQLEGFGGVLGVTKGLWT EFGSERVIDTPITESAIIGMAAGAAATGLRPVADLMFMDFYGVCHDMLYNQAAKFRYMFG GKAKAPMVVRGMIGAGFSAAAQHSQSPYNVFAAVPGLKVVVPSSPYDVKGLLIQAIRDDD PVVFCEHKMLYDIKGEVPDDAYTIPFGVANYTREGTDVTIIALGLMVHRANEVADKLAKD GISVEVVDPRTISPLDEEGILESVASTGRVVIVDESAARCGFGHDVAALVAQKGFHYLKA PVELVTPPHTPVPFSPVLEKEWIPSVERIEQAVRKTLEA >gi|333032548|gb|GL891878.1| GENE 114 118984 - 120474 1599 496 aa, chain + ## HITS:1 COG:CC1729 KEGG:ns NR:ns ## COG: CC1729 COG0508 # Protein_GI_number: 16125973 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes # Organism: Caulobacter vibrioides # 205 496 120 428 428 252 47.0 1e-66 MEEGTIAQWLIKEGDSFNKGDEICEIETTKIVNVLEAPFAGTLRKILAKDGDTLPVGGLI AVCADNEVSDAEIEKFIASLGGSAAQAPAAPSEQSKAETSVPVAEKAEQPLTTAASASAP AKVAKGDYAVPESLQGYQTSDDLFATPHALKLAEKHNVNLAKVTGSGREGRISVQDIQKT VQAAGGQWPDVKQQTQTKVVKSTADDSQILATPVARRLAKQWGINLNDCRVSGTRGRVCK EDVEAVYYRNNPVSVSEQPLQCATQPQSTVTTVAMNGMRKAIASRLQAAKRNAPHFRLVV DLNVEALQKLRKQINETVPQVKLSINDMLIKAAAAALIKVPEVNVQFDEATQSILQFSQA DISVAVAIPNGLITPIVKAANQKSLAQISDDMRDLATRAKTGKLQPDEFQGGSFSISNLG MLGIKQFDAIINPPQGAIMALGASESRAVVENGNVVVREIVTATLSCDHRVIDGAVGAKF LASFKQFVENPALILV >gi|333032548|gb|GL891878.1| GENE 115 120485 - 121888 1041 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 4 467 2 458 458 405 43 1e-112 MSEAQFDLIVIGAGPGGYVAAIRAAQLGLKTAIVEERHLGGICLNWGCIPTKALLAGAEL ATQFKHAGQFGFQVSQLDFDIQKLVQHSRQVSAQLVQGIDYLLKKNQVTVFSGRAQLTAK EKIEVTDAQGNRQALSAPHIILATGAKARHVPQLPVDGTYVWSYKEALVPEQLPKSLLVV GSGAIGSEFASLYQDLGCQVTLIDLAKQILPTEDAEVAQFVRKQFEQKGMKVLTDAVVQS IQIENEQVHCVVETANDVQTLVFDRVLSAIGVQPNTTGLGLERLGVELNPQGFVAIDDYC KTNVAGLYAIGDVAGAPCLAHKASHEAMICVEKIAGVANVHSLDRSQIPGCIFTHPQVAS IGLTENAAKAKNLPIRIGKFSLTANGKALAIGDASGFVKTVVHAETGELLGAHMVGHEVT EHIQGFAIAKYLEATDESLAQVIFPHPTLSEAMHESILASMQRAIHM >gi|333032548|gb|GL891878.1| GENE 116 121915 - 122700 901 261 aa, chain + ## HITS:1 COG:Cgl2619 KEGG:ns NR:ns ## COG: Cgl2619 COG1028 # Protein_GI_number: 19553869 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Corynebacterium glutamicum # 7 260 2 257 258 225 51.0 7e-59 MVKGLQNKVALVTGAAQGIGRGIALRLAQEGAHIALVDMKQDRLNDVQQEIQALGVNAST FIADVSDREQVYAAINHAEQALGGFDVMINNAGIAQVQAIADITPDEFQKIVDINIGGVL WGIQAAAAKFKQREHKGKIINACSIAGHDGFALLGIYSATKFAVRALTQAAAKEYASHGI TVNGYCPGIVGTDMWVEIDKRFAEITGAAIGETYKKYVEGIALGRAQTPDDVAALVAFLA SEDSDYITGQSILTDGGIVYR >gi|333032548|gb|GL891878.1| GENE 117 122730 - 123788 1316 352 aa, chain + ## HITS:1 COG:NMB0604 KEGG:ns NR:ns ## COG: NMB0604 COG1063 # Protein_GI_number: 15676508 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Neisseria meningitidis MC58 # 1 352 1 352 354 597 87.0 1e-171 MKAARFYDRGDIRIEDIPEPEVTPGTVGIKVAWCGICGTDLHEFMEGPIFIPPCGHPHPI SGESAPITMGHEFSGVVYAVGEGVDDIEIGQHVVVEPYIVADDVPTGPGDNYHLSKNMNF IGLGGRGGGLSEKIAVKRRWVHPISNKIPLDQAALIEPLSVGHHAFVRSGAKAGDIALVG GAGPIGLLLSAILKAKGLKVIITELSAKRKEKAKESGVADYILDPSEVDVVSEVMKITNG DGVDVAFECSSVNKVLDTLVAAVKPTGVIVIVSIWSHPASINVHSVVMKELDVRGTIAYV NDHQETIKLVEEGKINLEPFITQRIQLDDLISQGFETLIHNNESAVKIIVHP >gi|333032548|gb|GL891878.1| GENE 118 123836 - 124747 849 303 aa, chain - ## HITS:1 COG:mll4386 KEGG:ns NR:ns ## COG: mll4386 COG3781 # Protein_GI_number: 13473700 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 1 298 9 304 309 198 35.0 1e-50 MIVRDKSNVFKLLFAWKGTILPKVLPALSFVVLISACVVWLSYYHWIQIPTVPAIGFTIF GVILSICTGFRNNACYDRWWEGRKLWGALIANARHIVRDSHVLSNEQREHLIHQVLIFSN LLRDRLRQQTVEPTKFLEHAYLNNSSLNYLNEHINAPQFVLENIQKDLVKALKDGEISDI IYGTLTRHIVELGNIQAGCDRIAGTPLPYSYSVLLHRAVYCFCFILPFSLEAALGIWTPL IVGLIAYMFLGLDALSAQIEEPFGLQENDLPLDSIVRLIERESLSSLGQPLPPIIEAQNN NLL >gi|333032548|gb|GL891878.1| GENE 119 124817 - 126088 1088 423 aa, chain - ## HITS:1 COG:PA1945 KEGG:ns NR:ns ## COG: PA1945 COG2204 # Protein_GI_number: 15597141 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Pseudomonas aeruginosa # 135 423 152 441 442 243 43.0 5e-64 MAKLNFESEQNFYILFEQLKALFPNASLFLADTTTQAIHYKFNTDDISVESMAALTQDHH NQYLEINTPKMRKRFIYQEHDIYIAEHRIIGKLHILQPVSIENDIADQVELTEQLQDLAK VFNSCSPEMARMFSIIQRVAITEFPVLVRGESGSGKELVAQAIHDYSQRKNKIFVAINCA ALNANILESELFGHVKGAFTGAIRDHKGVFERAAGGTLFLDEIAEIPLELQAKLLRVLET GEFTPVGGEKPIQANVRIITATHKALREEAKAGRFRHDLLYRLRVIPIFIPPLRERKVDI PLIVDQILKESSTQLDTMPRHVNQKAMQVLLNYDWPGNVRELKNTLLYALTMANGKDEIE IEDLPNELLNADDYVKLPETNAELSPENVQAALEKYNHNLNMVANIFGISRTTLWRYRQK HKL >gi|333032548|gb|GL891878.1| GENE 120 126280 - 126975 684 231 aa, chain + ## HITS:1 COG:alr3904 KEGG:ns NR:ns ## COG: alr3904 COG0491 # Protein_GI_number: 17231396 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Nostoc sp. PCC 7120 # 1 229 1 229 233 233 50.0 3e-61 MFFKQFFEQESSTYTYMLGCEETREAVLIDPVASDIEIYAKELEQHQFTLIYTLDTHVHA DHITAADLLRERFHCKSVLHRNSEVSCGDILITDGCMLKVGNLSIEARYTPGHTNACTSY LVGNMIFTGDALLIDGCGRTDFQQGNAGTLYDSIHKQLFSLPDETIVYPGHDYKGRLSST IGYERLNNSRLGQNRSREDFIELMNNLNLPYPKQIDKALPANQACGSISQL >gi|333032548|gb|GL891878.1| GENE 121 126985 - 128640 1427 551 aa, chain + ## HITS:1 COG:PA2345 KEGG:ns NR:ns ## COG: PA2345 COG0446 # Protein_GI_number: 15597541 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 165 548 28 409 411 473 60.0 1e-133 MELKRVNQDFYVAGQITANDIVKIADQGIKTLICNRPDGEGADQPNVIEIEEAAQRHGLN VIYQPVISGKISDQQVTEFKQLYQNAQKPVLAYCRSGMRAISLWALAEVAPQDAALLVES GNKLGFNLKGLVPRILKRDHEPATIPCYSVVIVGAGAAGISVASSLLCREPHLDIVIIDP ADTHYYQPGWTMVGGGIFKPQVTARSMTSVIPSKVKWMKAAVAGFDPEHNQVILEGCQPI QYKALVVCPGLKLNWHGIEGLVETLGKNGVTSNYRYDLAPYTWELVQQLNSGKAIFTQPP MPIKCAGAPQKAMYLSADYWLKQGKLKDISIHFYNTGAVLFGVKEYVPALMQYVEKYGTE LHFNHQLVKVDGPAKKAWFKVVNDENAALVETDFDMLHVVPPQQAPDFIRASTLTDEAGW VSVNPQTLQHTQHANIFALGDVMNAPNAKTAAAARTQAPIVAVNVIAQLKGEKNFCEYNG YGSCPLTVERGKIVLAEFGYGGKLLPSFPKWVIDGQKPSRLAWLLKERILPPIYWQGMLK GREWMVKPEQG >gi|333032548|gb|GL891878.1| GENE 122 128912 - 129703 853 263 aa, chain + ## HITS:1 COG:RSc1541 KEGG:ns NR:ns ## COG: RSc1541 COG0730 # Protein_GI_number: 17546260 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Ralstonia solanacearum # 8 256 15 270 273 117 41.0 3e-26 MLLLVVEGIVIGFLLGLTGAGGGILAVPALMTSQGWSVAQAAPIGLLAVALSTLIGTIEG LFKKIVRYRAAIWIALIGAPMAHIGILIANTISPIWLMLMFSLVMFTVGYRLISNRISDF HNPPCQVNPSTGRFIWNFKTGGVLASIGIIAGLLTGMLGVGGGFVIVPALRKVTNLDMHS IVATSLMIIFLISGMSIVMHIAEGFHYPVAITSAFALACAFGMLLGRRAIRFIPSAIVQK VFALMVFAVAIYMVIKIVNLTNI >gi|333032548|gb|GL891878.1| GENE 123 129813 - 130817 1002 334 aa, chain + ## HITS:1 COG:MA2572 KEGG:ns NR:ns ## COG: MA2572 COG0460 # Protein_GI_number: 20091398 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Methanosarcina acetivorans str.C2A # 1 326 1 325 332 174 31.0 2e-43 MKRINVAICGFGRIGQQIAELLLNRSTYYKQKYQIDARLVGVCNSSSGLINQDGLQASKW LDKTQYQAGLTEQKFLEKVQADVIIETGPSDYVTGGKGLFYLNYALTNNMNAIAVSKGAL VVEGKKLINLAHQHNKKLFFSGATAAALPTVDLFEYNLAGCQILEIEGVFTGTTNFILND MLQHECAFAESLEKAQAKGIAEPDSSFDVDGWDTAAKITILANTVLGADVKIQDIPRQGI SHVTAEHIRGWKKENVIPRLVGFIHIKNQQIQTGVELRLVPANHPFAHLQGSNKCIRVLT QEMGEFVVSGGASAPLATAAAALKDFELMLKTGC >gi|333032548|gb|GL891878.1| GENE 124 130850 - 131767 671 305 aa, chain - ## HITS:1 COG:PA3897 KEGG:ns NR:ns ## COG: PA3897 COG0697 # Protein_GI_number: 15599092 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 1 287 1 287 300 197 47.0 3e-50 MNILLYVAVVLIWGTTWIGIAVQSHYATPVVAILWRFAISALLLWVVLLFSGKLQRIALK DHLFCMLQGLCVFGLNFICFYTAVKYVNSGLESVIFSMAVFFNAINALIFFKQKPSPNFA PAALLGLSGIVLLFWHDLINSQFNAQLLMGIGLCAIGTYGFSLGNMISVRHQKRGLNIFS TNCYAMTYGALVMLILALFTGQDLMPPMNFPFLSSVLYLAVFGTVIGFSAYFSLVGRIGA AKAAYSTLLFPLVALTVSTFFEGYEWTLNAVFGILLILLGNYLMFSKFEIGKKLFSSQKN CEKQA >gi|333032548|gb|GL891878.1| GENE 125 131934 - 132788 664 284 aa, chain + ## HITS:1 COG:PA3898 KEGG:ns NR:ns ## COG: PA3898 COG2207 # Protein_GI_number: 15599093 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 3 284 10 287 293 194 37.0 1e-49 MAYQTLEQLQQSKAKLHETVVLDENMQLAFWSNQQDRVSVCSDHHTLSLYIQDGYESYQK TPAGWKNGGGPGRFCLLPEHQESTWDIRGGLKFVHLYYTDQHLRDVAEKIWDKEPNQIEL NEVVFNDDERIRALYQFFLLDCDWQDSSNHLQMSTTASLLLNHLIRKYSSVQWQQPTIKG GLAPHKLKYIQEWIEDHLDQALTLSDLANIVNLSEYHFAHMFKQSMNMAPHQYVMQRRLT KAKGLIQSSQLSLQDIALVCGFSSASHLSHRFKQFYGMSPSQLR >gi|333032548|gb|GL891878.1| GENE 126 132785 - 133180 326 131 aa, chain - ## HITS:1 COG:mlr2600 KEGG:ns NR:ns ## COG: mlr2600 COG1733 # Protein_GI_number: 13472337 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 121 1 119 122 130 49.0 8e-31 MTVTIPHDIQSSDCQRVSQVLARVGEKWSILIVMTLASHPHRFSEIKRRINGISQRMLTL CLRGLERDGLIKRTVYPVVPPHVEYELTPLGHSLTEPVIALGQWAQQHIADIDAARAAFD AAQEKPITLDT >gi|333032548|gb|GL891878.1| GENE 127 133276 - 133884 796 202 aa, chain + ## HITS:1 COG:SMc01329 KEGG:ns NR:ns ## COG: SMc01329 COG1182 # Protein_GI_number: 15965089 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Sinorhizobium meliloti # 1 199 1 198 206 220 54.0 1e-57 MKLLQIDTSILGEQSVSRQLTSSVIRQLSTAYPDAEIIHHDFALEPIPHLSDAEFLAWQG VEPNNETAQQRVARNTQYLDEFLSSDIVVIGAPMYNFSFPSQLKAWLDRLSVAGKTFRYT ENGPQGLVEGKRVIIASSRGGVYSEGSPAEALDYQETYIKAFFNFIGVTDITFVRAEGIA FGPEARQAALDNAAAQIAQLAG >gi|333032548|gb|GL891878.1| GENE 128 133968 - 135317 1170 449 aa, chain - ## HITS:1 COG:mlr5407 KEGG:ns NR:ns ## COG: mlr5407 COG2059 # Protein_GI_number: 13474508 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Mesorhizobium loti # 17 439 20 451 463 347 48.0 3e-95 MQQKQLNTPDDSVEQVTFWQAFLFWLKLGFISFGGPAGQIAVMHQELVEQKRWISEKRFL HALNYCMLLPGPEAQQLATYIGWLMHRTAGGLVAGILFVLPSLFILIGLSWVYIKFGDVP VIAGIFYGIKPAVTAIVFHATYRIGSRSLKNKFLWVVAIAAFFAIFVLKLPFPLIVLTAG IAGYLASKKYPELFSSAGGHKASQKDYGPAYIDDDTPTPEHAKFHWSRLARLIFVAIALW LLPILALGAYFGWHHSYTQMAWFFTKAALLTFGGAYAVLPYVYQGAVNHFGWLSPTQMID GLALGETTPGPLIMVVAFVGFLGGVNHSLLGSEHLFFAGALGAVIVTWFTFLFSFVFIFA GAPIIESTHNEIKFTAPLTAITAAVVGVILNLALFFSYHVLWPQGFSGHFDIVAALITVA AFIALFRFNINVLYVIFASALVGLAVTFF >gi|333032548|gb|GL891878.1| GENE 129 135559 - 136302 670 247 aa, chain + ## HITS:1 COG:PA2299 KEGG:ns NR:ns ## COG: PA2299 COG2188 # Protein_GI_number: 15597495 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 8 247 6 243 249 259 55.0 4e-69 MSQLPQDPKNHKPLYDQLRELILNKIVNGEYAVLSQIPSENEFAEQFGVSRITVRQALNQ LQLEGYIFKVPGKGTFVSKPKTFQNISSLQGFAEAMSSAGHEILNRVISAELKQIPMYVV PKLKLPVKANVYEIQRVRLLNRQPVSYELTYLPEHIGLKLKEKAIDLRTTDIFKALEQEC DIPLGHADLSIDATVADEELAALLQVEIGTPVLRVERLTHDANGQPIDYEYLYFSGDTFQ YRLRIHR >gi|333032548|gb|GL891878.1| GENE 130 136331 - 138064 1619 577 aa, chain + ## HITS:1 COG:PA2298 KEGG:ns NR:ns ## COG: PA2298 COG1053 # Protein_GI_number: 15597494 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Pseudomonas aeruginosa # 1 574 1 574 574 967 77.0 0 METKYLEFDIVVIGGGTAGPMAAIKAKQENPNLKVLLIEKANVKRSGAISMGMDGLNNAV IPGYATPEQYTKEITIANDGVVNQTTVYAYAKHSFTTIQQLDQWGIKFEKDETGEFAVKK VHHMGAYVLPMPEGHDVKKVLYRQLKRAQVKINNRIVTTKLLKNEQGAINGVLGFDCRSG DFYVIKTKAAILCCGAAGRLGLPASGYLMGTYENPTNAGDGYAMAYHAGAELANLECFQI NPLIKDYNGPACAYVTGPLGGYTANSKGERFIECDYWSGQMMWEFYQELESGNGPVYLKV DHLAEETIQTIEEILHTNERPSRGRFHEGRGTNYRQDMVEMHISEIGFCSGHSASGVWVN EKAETSVKGLYSAGDMAAVPHNYMLGAFTYGWFAGVNAAQYVNAIEDSELNQSEIEAEKA RIFAPLDCSEGLPPEQVEYKLRRFVNDYLQPPKTRQKMQIGLKRFEEIKQDIKRISARNP HELMRAAEVSFIRDCAEMAARASLFREESRWGLYHYRADFPQKNNSDWFCHAHLKKDEHG NMVSFKKPIEPYLVPINQDEAVSYDRLRIQKDVALAD >gi|333032548|gb|GL891878.1| GENE 131 138085 - 138330 216 81 aa, chain + ## HITS:1 COG:PA2297 KEGG:ns NR:ns ## COG: PA2297 COG1146 # Protein_GI_number: 15597493 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Pseudomonas aeruginosa # 1 81 1 81 81 115 76.0 2e-26 MAFIFKEVQHRTVAPVIIDEDKCIADKGCTVCVDVCPMDLLAIDPTTQKAYMQFDECWYC MPCEKDCPTDAVKVNIPYLLK >gi|333032548|gb|GL891878.1| GENE 132 138350 - 139780 1557 476 aa, chain + ## HITS:1 COG:PA2296 KEGG:ns NR:ns ## COG: PA2296 COG0715 # Protein_GI_number: 15597492 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Pseudomonas aeruginosa # 28 467 18 457 468 585 63.0 1e-167 MRQNKLINKKLLLSSLIGAMVLGTLGCGSKTETVRVAIGTQDTTINCATGGLLIRELNLL PKYLPKDGKYKHVKYDIQWKNFTSGAPLTSEMVAGRLDLGAMADFPAVNNLAAFKKAGKE SIFLAPLSGSINGSGNAIVVPIDSKVTSLKELKGQTISVPFASTAHGLLLRAIQAEGWQL DKDIKVIAQAPEVAGPALKSHKISAHADFVPFGELFAYQGFAKKIYDGSQAKSPTFHGSL ASKDYAQQHPEVIKAYLQATIEANRLIQEQPEKYSEIIAEKTGIPAEVVYLFHGPLGLQT RDLTWKPEYRKATQIAIDTLKVLGKNDGTLDVNKFIDDQYIKDAFQASGLNYSQQLADYA KSPLVANDALTGQPIKTFDRVTQIWVKGEEKVRSYETPEHAFSDLKKIQADGKTVRVVYS QDHQSDIKLLANLAWYATDKTGQIQAFLLKDDAEKWAKQQGGKVYDFKAIQLVTQS >gi|333032548|gb|GL891878.1| GENE 133 139815 - 140669 659 284 aa, chain + ## HITS:1 COG:PA2295 KEGG:ns NR:ns ## COG: PA2295 COG0600 # Protein_GI_number: 15597491 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Pseudomonas aeruginosa # 39 279 18 258 265 257 61.0 2e-68 MSSLAQTKPNNQSTFLTKFFQQLRSYPARLKSYVIAFTSIAFWIVIWQGLAQFKVNLGFV NFSNVPTPLDVIHALWAFFQLSAAFEHVESSVFRVVVGFVLAALIGVGIGLLAGRYQKLA AFLMPPLEVLRPIPAVAWIPLAILIFPSSEASMIFITFIGALFPILLNTVHGVGAVDPRL VASAKSLGASDLAIIHEVIIPGALPNIITGLSIGMGTCWFCLVTAEMISGQHGIGYFTWE SFTLQNYSNIVVGMVLIGALGMFSSTLVRVIGNRFTPWYQLRKS >gi|333032548|gb|GL891878.1| GENE 134 140671 - 141510 297 279 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 8 235 2 235 245 119 33 1e-25 MSVTQGHVRIQNLSLHLGQAKNRFQALDRVNFEIQPGEFICLLGPSGCGKSTLLGALAGH LPISSGSLTVDDESIFEPHPDRGLVFQQHTLFPWKSVLENIAFGLKMKGIAKQKRIEQAQ KMIDLVGLKGFEHKFPAELSGGMQQRVEIARVLINQPRILLMDEPFGALDAQTRLKMQML LLEIWQEIQTSVLFITHDIDEALFLADRVLIMSHRPGRIIEEIPLKFERPRDVELVTSSE FTAIKKHCIQTLKEATQQEELSRLNPLGLGKKSQIKEYE >gi|333032548|gb|GL891878.1| GENE 135 141507 - 142505 1036 332 aa, chain + ## HITS:1 COG:PA2293 KEGG:ns NR:ns ## COG: PA2293 COG1413 # Protein_GI_number: 15597489 # Func_class: C Energy production and conversion # Function: FOG: HEAT repeat # Organism: Pseudomonas aeruginosa # 17 323 13 317 321 186 43.0 8e-47 MSFYYQALDDIDEYNQEFLAQLNHADEKIRFVALMNIGDEENPSLLPWLHAALQHDSSAL VREEAAKKLESWEDPTSLQVLAQALFDVDLNVRQAASQSLSEVKNAASAQILAPYLKHTD TFALGAILRALKPLRPQQLFEEISALVHHEDAFVRREAVSALSWLQQDQAITILAKIAET DTDDEVRRIATGGLAYSQNISVEVIQALQHSLTSESWQLRVEAALTIGKLRIVQLEAPLI HAVSDLYWQVRIAAVRSLGLLKSHLAVAHLTDNFKHEISNLRKEVALALGEIGTAEAQKL LEQHQNDPDPEVRKAIRIGLNQIGEVKYANQT >gi|333032548|gb|GL891878.1| GENE 136 142489 - 142770 134 93 aa, chain + ## HITS:1 COG:PA2292 KEGG:ns NR:ns ## COG: PA2292 COG3536 # Protein_GI_number: 15597488 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 20 89 21 91 93 74 42.0 5e-14 MQIRPDIRVDTINKQVHFIWTDGSSVCLSHQSLREICPCGFCRAKRIKQIKIEHQNVEVT AMFDQGYGAQICFSDGHDKGIFPWAFLKEFAKS >gi|333032548|gb|GL891878.1| GENE 137 142810 - 144096 1428 428 aa, chain - ## HITS:1 COG:RSp0075 KEGG:ns NR:ns ## COG: RSp0075 COG0477 # Protein_GI_number: 17548296 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 7 427 17 436 437 400 53.0 1e-111 MTYTQEEKRSRIRGIVGAASGNLVEWFDFYIYAVFAAYFTQALTAPDMDSTTKSIYVWGV FAASFFMRPIGSWLFGRIADRHGRKKSMIISICLMALSSFLFAALPTYDQVGLFAPFLLL LVRLLQGLSVGGEYGAVATYMSELGLKGQRGFYSSFQYVTLSGGQLLASLLGVILLTFLS EQQLHDGGWRIPFVIGGIAAILSLLARSRLEETLSHQDSERKESGSLRELFKKHWKTFLL VVGYTSAGSLTFYVETVYSKTYLTNLGMDGKTVGYIMTFALFVYMCAQPVFGAISDRIGR RSSMLAFSLLSAIFIYPVMVIGMRAYIDSPIIITLLLIFMMMLLSFYTSISGLVKAEMFP PHVRALGVGFSYAVGNALFGGSAPSVALQFKAAGIENTFFIYVIVMLIICFLCSLALPKK PDYLEHDH >gi|333032548|gb|GL891878.1| GENE 138 144615 - 146819 2031 734 aa, chain + ## HITS:1 COG:RSc0800 KEGG:ns NR:ns ## COG: RSc0800 COG1629 # Protein_GI_number: 17545519 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Ralstonia solanacearum # 20 729 13 700 705 218 26.0 5e-56 MHGMAGSYSMERRSLNLHFMTCSKTALASSIALITSVVYANEAEVSQLPTITVNATQNSD ALYTSKKVSLSGFQTGDVKKVPASITTITSERIADQHAKTLTDVIKNDSSLGDGYAAIGY YPNFVARGFALDLGSSYLINGHTIRGEQNVALENKEQVEILKGISAIQSGMSTPGGVVNY VTKRPADIKTITVDANSEGGYTLATDVGGFVNDSFGYRINLAHESIHPNVDHANGKREFG SVALDWKINERSKLLFDIEAQHQSQRSVPGYQLLDGQEVPTNVDQDRLLGYQSWSKPVVN NSVNASLKYQYAFNDQWNGSLSASQSRVVIDDNSAFPWGCYNDICEYSGLGNTFDKHGNY DIYDFRSPDDTRITNQFAAGLNGHFNTGNIQHQIAFELQRTYKTLKHHTPLNVAVGTGNI YEDTVDYSPSSESPGDRYKALESDQTALTVSDRVQFNDQWSTLLGGKLIHLDEQAYNSDG QQSRDTDLNKFLPQLALMYSPTSTTNLYASYAKGLSDGGEAPWFANNALEVLSPKNSEQY EVGIKQQIRNFLVTAAIFDLKQDNQYTTANSAGELEFISQGEQHNQGIELGLTGALTDTL DVSSGITYTKSRLVDIDTDSYKGHQTQNVPKVRATAQLSYKVPSVEGLRLLSGMQYSSSK YANKEGTAKVGGYSVFNIGAAYKTNFAGHDTTFRFNIDNLFNKKYWRDVGAFMGDDYLFL GNPRTAQFSTNFSF >gi|333032548|gb|GL891878.1| GENE 139 146877 - 148292 1580 471 aa, chain - ## HITS:1 COG:PA5429 KEGG:ns NR:ns ## COG: PA5429 COG1027 # Protein_GI_number: 15600622 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Pseudomonas aeruginosa # 1 469 1 469 474 586 64.0 1e-167 MNADITTRIEKDLIGHREINNDHYYGVQTLRALENFNLTNSKVGNFPNLIKALAMVKLAC AEANYNLKNLDQTKFEAIEYSCNQLIRGNFHDQFPIDMMQGGAGTSTNMNANEVLANVAL EYMGHSKGQYQYLHPNNDINMSQSTNDVYPTAIRLGLLLSLDELNLPFNNLILSFLNKSQ EFAHILKMGRTQLQDAVPMTLGQEFGAFAVTLQKDLEQINTLIPNVLAYMNLGGTAIGTG ITTEYSYRELAIQALGKISGKKIKSAPDLIEATSDMGDFVLLSGLLKRTATKLSKIANDL RLLSSGPRTGINEINLEARQPGSSIMPGKVNPVIPEAMNLACFQIIANDLAVTLAAEAGQ LQLNAMEPLIAFKLFESMDLLGKAMAMFQTKCIDTITANPEHCKALVENSIGIVTALNPY LGYETTTRIAKTANETGQSVLALVQNEGLLSAQVLDDILSINNMVKPKMSA >gi|333032548|gb|GL891878.1| GENE 140 148709 - 148894 226 61 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01763 NR:ns ## KEGG: ACICU_01763 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 61 1 61 61 95 100.0 8e-19 MLKVTAALLILGSFACYLLWDNEEKAETKSSHMLKEAEQSIKNAELSIQKAKQNIPTASY Q >gi|333032548|gb|GL891878.1| GENE 141 148980 - 149207 225 75 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1919 NR:ns ## KEGG: ABAYE1919 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 75 1 75 75 125 100.0 6e-28 MRMKFIAYDPNSGEKLSLKEHIHHMDKYTTYVFFSDEKDNMVFNPQKKQIFEISQYTSNM MVEISRKLYYLIGEY >gi|333032548|gb|GL891878.1| GENE 142 149985 - 150881 777 298 aa, chain + ## HITS:1 COG:PA5428 KEGG:ns NR:ns ## COG: PA5428 COG0583 # Protein_GI_number: 15600621 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 294 1 296 302 188 31.0 1e-47 MNLEVRWVEDLLTLERERSISKAAEKRFISQSAFTRRIQQIEEMIGAEVIIRNNKNNIEF TDIGRILLVMSKNIEKQVEETAKLIKNIKNETESTIRFCVVHSLASGFLTTFLKKFPTLI RDLKIEIVATNSGEGLSLLKEGACDFMICYADKSNIRKVGDDILSGIKIAETVIVPVSAT EPDHSPKHTIQSNFALLAYSKHAYLRKLVDQLIEGKLVYKTLYETDNATNLKELVLQGLG VAWIPKINVEEDLAAGKLVILDQQEYCLAQDIYIFKNNLSDNKSVQKIWNGFKGQQDL >gi|333032548|gb|GL891878.1| GENE 143 151185 - 152015 668 276 aa, chain + ## HITS:1 COG:RSc1092 KEGG:ns NR:ns ## COG: RSc1092 COG0583 # Protein_GI_number: 17545811 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 273 27 298 300 180 34.0 3e-45 MAADAIGLTQPSVSNGLNKIRQHFNDPLFIRVGNEMIPTELAKQIFPLISEVIDKVESIN NFNVNFDPLTSDQLFTIAMTDVSHLVLLPQLTNYLKEKAPLIRLNIRPITPETSYQMANG EIDLAIGFLPQLEEGFYQQKFFRQHYVVISSKSHPRLDPNNFTLEDYMRESHIDIDAGIG HYHIKNELQNKGLDRNILIRLPSYLGVGLVVQETDAIATVPYYLSQVLLVRENLQILPAP LDFPTYDVKQHWHMSCHHKSSHKWFRQTCYELFKTA >gi|333032548|gb|GL891878.1| GENE 144 152075 - 153247 1612 390 aa, chain - ## HITS:1 COG:PA3925 KEGG:ns NR:ns ## COG: PA3925 COG0183 # Protein_GI_number: 15599120 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 390 1 390 391 479 67.0 1e-135 MSSIVIVSGSRTAMGGFQGSLSSLTAPELGAAVIRESIQRAGVKPEQVDEVIFGCVLSAG IGQGPARQAMRKAGVPDHVGAVTINKLCGSAMKAVLMASDTLKAGSANIIVAGGMESMTN APYILPKARGGYRMGHGEIKDHMFLDGLEDAETGRLMGSFAQDMANTKGFTREQMDDFAI SSLKKAQTAITEGYFKEEIVPVEVKTRKGVEVVDQDEQPLKANLEKIPTLRPAFSKDGTI TAANSSSISDGAAALVLTTEEYAQSHGLNTLAKIVATSTHSQHPSEFTIAPISAIQKVLE RAGWSVDEVDAWEINEAFAMVAMAPIHELGIDEAKVNVHGGACALGHPIGATGSRIILSL IYALKRLGKKKGVAALCIGGGEATAVAIEI >gi|333032548|gb|GL891878.1| GENE 145 153313 - 154722 1269 469 aa, chain - ## HITS:1 COG:PA2002 KEGG:ns NR:ns ## COG: PA2002 COG2031 # Protein_GI_number: 15597198 # Func_class: I Lipid transport and metabolism # Function: Short chain fatty acids transporter # Organism: Pseudomonas aeruginosa # 4 467 8 471 474 487 59.0 1e-137 MEKQQGIFERFALRISDWSEKWFPDSYIFALLGVIIVSVAALGIGAPIHDVATSFGNGFW SLIPFTLQMTMLIIVGYVVSVSKPVKFLIQKMARIPSSGRGAIVLVATVSLLISLVNWAI STILTALLVIALAKRKELNMDYRAAAAAAIIGMGATWALGISSSAAQLQANKTSLPESIY NLTGVIPFTETIFLWQSIAMTIILVIVSIAIAYWSAPKGNSVKTIDSFDVQFEEEKTNEA KSTRPGDWLENSPILTIIVVILGLIWMFFEFSKSNPIIAISSLNTYNFVFLMLGLALHGT PRNFLNAVAKAVPAVSGILIQFPLYGSIAFIMTQALNSQDLSLSHYIAEFFVSIASKETF AIVMGIYSAVLGFFVPSGGGKWIIEAPYVMQAANDLKVHLGWSVQIYNAAEALPNLINPF FMLPMLGILKLKAKDVIGFTVTQLVVHFPLVLFLLWFFGRTLSYTPPTF >gi|333032548|gb|GL891878.1| GENE 146 154839 - 155480 957 213 aa, chain - ## HITS:1 COG:DRA0067 KEGG:ns NR:ns ## COG: DRA0067 COG2057 # Protein_GI_number: 15807735 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Deinococcus radiodurans # 1 209 1 209 209 309 72.0 2e-84 MAWSRNEMAQRAAKELEDGFYVNLGIGLPTLVANYIPENINVWLQSENGLLGIGEFPTEE TVDADLINAGKQTVTARSGAAFFSSSESFAMIRGGHVNIAILGAMEVSEKGDLANWMIPG KKVKGMGGAMDLVVGVQKVVVLMEHCAKDGTPKIVKNCSLPLTGKGVVHRVITDLGVMDI TPQGVELIELAKDVTLEQIQAATGVEFYKTLVA >gi|333032548|gb|GL891878.1| GENE 147 155482 - 156186 799 234 aa, chain - ## HITS:1 COG:RSc1570 KEGG:ns NR:ns ## COG: RSc1570 COG1788 # Protein_GI_number: 17546289 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Ralstonia solanacearum # 1 229 1 229 232 340 72.0 2e-93 MNKVYANAEAALKDVITDNQTLAVGGFGLCGIPEKLIVAVKQSGVTGLTCISNNAGVDDF GLGILLQTKQIKKMISSYVGENKEFERQYLNGELEVELTPQGTLAEKLRAGGAGIPAFYT QTGVGTLIAEGKEERIFNGKNYILEESLTADVALVKAYKADKAGNLVFRKTAQNFNPECA MAGKITIAEVEQVVEIGELDPDEIHLPGIYVNRIVLNASPEKRIEHKTLSTEAV >gi|333032548|gb|GL891878.1| GENE 148 156432 - 157313 771 293 aa, chain - ## HITS:1 COG:PA1998 KEGG:ns NR:ns ## COG: PA1998 COG0583 # Protein_GI_number: 15597194 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 290 1 290 306 214 41.0 1e-55 MTLKQLKAFLALARTLNYANASLELHLSQSALSLTIKSLEEELGGKLFNRNTRRVELTQE GKSLIPYAKKLLANWDEMENDVKQRFKLNRGTLSIASMPFVTHAILPEVIHQFLAVHPNL NFSIHDIPNETIIEKVQDGIFELGICFEPDLTEGLEFKPLFEEDFLALLPKSHPLAQSSS ITWHELCSNPFVTLQKPSIVRYLVEQNCLRNNITLDLKVECHQISSLSSFVAYGIGVSAI PRHFAKHIDKEHNVLIDLKDEAIHKTVGIVYKKNFEISNISAQFIEALVQYKF >gi|333032548|gb|GL891878.1| GENE 149 157594 - 158052 328 152 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001759 NR:ns ## KEGG: ABBFA_001759 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 152 1 152 152 225 100.0 6e-58 MSYTTVHMRHTSSGSSSSRDAKDVFISGCRNDFDFSQITPEKISKLSKENQNYFHKCDDA INNKLSVDSLVYYSSFILPIICILIFIRIGKKHYRIAEEKIKNAKYPVIFARKPENNPSN SMEIALVIGGVLAALIYILIYIVYIIIVEIKY >gi|333032548|gb|GL891878.1| GENE 150 158461 - 159882 1633 473 aa, chain + ## HITS:1 COG:BS_yxjC KEGG:ns NR:ns ## COG: BS_yxjC COG2610 # Protein_GI_number: 16080951 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Bacillus subtilis # 15 440 14 439 454 521 66.0 1e-147 MWELFVILLSLGLLMYTAYKGFSVILMAPICALLAVLLINPANVLPFYSGVFMPKMVNFI KDYFLVFLLGAIFGKVVEMSGIAESIARTIVRWIGAKKAILTVVLLGAILTYSGVSLFVA VFAIYPFANQLFRQANIPKRLIPGTIALGAFTFTMDALPGTPQIQNVIPTTFFGTNIYAA PFLGIIGAIFVLCMGLAYLEWRRRAAAKAGEGFSGFGVDNTPSQEIEADMNLQNNGSTAR QFLAFVPLILVAVMNKYLSKAIKEWYPNGFDFAAVGLADYTVDVAKTGAIWAVGLALIVG IITAILFDYQRVVTNFKEGINASIGGSLLAVMNTASEYGFGAIIASLPGFAMISHAMSST FTNPLVNGAVTTTVLAGITGSASGGMSIALSAMAEQYNAAILAAGIPPEVMHRVVAMASG GMDTLPHNGAVITLLAVTGLTHKQSYKDIFAVTVIKTLAVFVVITVFTVTGIV >gi|333032548|gb|GL891878.1| GENE 151 159916 - 160701 1126 261 aa, chain + ## HITS:1 COG:BS_yxjF KEGG:ns NR:ns ## COG: BS_yxjF COG1028 # Protein_GI_number: 16080948 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 8 261 4 257 257 340 66.0 2e-93 MTKLLDGKVAFITGSASGIGLEIAKKFAQEGAKVVISDMNAEKCQETANSLKERGFDALS APCDVTDEDNYKQAIELTQKTFGTVDILINNAGFQHVASIEEFPTAVFQKLVQVMLTGAF IGIKHVFPIMKAQKYGRIINMASINGLIGFAGKAGYNSAKHGVIGLTKVAALECARDGIT VNALCPGYVDTPLVRGQIADLAKTRNVSLDSALEDVILAMVPQKRLLSVEEIADYAIFLA SEKAGGVTGQAVVMDGGYTAQ Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:03:55 2011 Seq name: gi|333032547|gb|GL891879.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld121, whole genome shotgun sequence Length of sequence - 3027 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 333 - 375 7.0 1 1 Op 1 1/0.000 - CDS 387 - 1712 1375 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 1739 - 1798 3.8 2 1 Op 2 . - CDS 1836 - 2825 1083 ## COG0583 Transcriptional regulator - Prom 2956 - 3015 9.9 Predicted protein(s) >gi|333032547|gb|GL891879.1| GENE 1 387 - 1712 1375 441 aa, chain - ## HITS:1 COG:ECs5196 KEGG:ns NR:ns ## COG: ECs5196 COG1253 # Protein_GI_number: 15834450 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Escherichia coli O157:H7 # 3 439 1 438 447 504 57.0 1e-142 MSLFQNIIIIVLLIIAAGFLSLTEIALAGARKVKLKILAEAGEERAQKVLDLQEQSADFF AASQIGLNAVAILGGILGEAAFRPFFVNLVDRFYEGPWTQTIGFALSFTLVTSLFILFAD LMPKRLAMIAPEKIAISVINPIQIFIKICKPLAWGINAIANLLFRLFKVNTTREDNITFD DISAVMDAGAQAGVLQKQEHHFIENVFELEERTVPSSMTTRENVVYFTLNEHEDSIRQKL AEYPYSKFLVCNENIDQVIGYVDAKDILVRILNNQSLTQLNESTIRTVLMIPDTLTLSEL LDRFRSTKEKFAVVINEYALVVGVITLSDIMITVMGDWVTPMEEEQQIIKRDNNSWLIDG STPIEDLKHALEMDELPDEENYETLAGFMMYRLRKIPRPADFVEFGGYKFEVVDVDHFKI DQLLVTRVLEKNDLPSPPDEN >gi|333032547|gb|GL891879.1| GENE 2 1836 - 2825 1083 329 aa, chain - ## HITS:1 COG:PA2551 KEGG:ns NR:ns ## COG: PA2551 COG0583 # Protein_GI_number: 15597747 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 317 1 305 310 186 34.0 5e-47 MNLERVDLNLLIYLDVLLREKNVTRAAEQLGVTQPAMSNILRRLRNLFNDPLLIRSSEGM TPTERALELQPRIRDALSDLSMILEPRTEFRPYTSNRVFRIMTSDYAEATLVPRLVKALR SEAPNVVLDFLTPSDVSYRDMEQGKVDLAINRFNEIPQSFHQVLVWRDSFSCILNDKHPA VTHLNLKSYLDAQHIWVSKTGMGVGFGVNPDKQGGLGWIDQALERIGQRRKISVFTRHYQ MPALLAQNVDLIATLPTRMARLQAQNPKLVIKDPPFYIPEFELKMAWCPLLHHHPAHRWL RQLILFVARQMIEEENREFLTNNSQFSHY Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:04:08 2011 Seq name: gi|333032546|gb|GL891880.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld124, whole genome shotgun sequence Length of sequence - 44616 bp Number of predicted genes - 42, with homology - 42 Number of transcription units - 16, operones - 7 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 14 - 73 3.6 1 1 Tu 1 . + CDS 97 - 657 374 ## ABBFA_002256 TetR family regulatory protein + Term 681 - 707 -1.0 - Term 661 - 701 4.2 2 2 Tu 1 . - CDS 717 - 1148 477 ## ACICU_01279 hypothetical protein - Prom 1368 - 1427 5.0 3 3 Tu 1 . + CDS 1401 - 2564 1289 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 2592 - 2626 2.0 + Prom 2572 - 2631 8.9 4 4 Op 1 1/0.400 + CDS 2878 - 3618 699 ## COG3665 Uncharacterized conserved protein 5 4 Op 2 1/0.400 + CDS 3634 - 4287 583 ## COG3665 Uncharacterized conserved protein 6 4 Op 3 . + CDS 4290 - 7895 3691 ## COG0439 Biotin carboxylase + Term 7898 - 7945 7.2 - Term 7891 - 7926 4.3 7 5 Tu 1 . - CDS 7934 - 8470 660 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) - Prom 8496 - 8555 5.9 + Prom 8458 - 8517 5.9 8 6 Tu 1 . + CDS 8563 - 8766 220 ## COG1733 Predicted transcriptional regulators + Term 8879 - 8914 -0.2 + Prom 8879 - 8938 3.8 9 7 Op 1 . + CDS 9031 - 9543 475 ## ACICU_01286 hypothetical protein 10 7 Op 2 . + CDS 9570 - 9713 57 ## gi|332874569|ref|ZP_08442470.1| hypothetical protein HMPREF0022_02089 11 7 Op 3 . + CDS 9715 - 9840 79 ## ACICU_01287 hypothetical protein 12 7 Op 4 . + CDS 9845 - 10279 503 ## COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 13 7 Op 5 . + CDS 10295 - 12103 1726 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 14 7 Op 6 . + CDS 12100 - 13122 1142 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Term 13140 - 13172 4.0 - Term 13122 - 13164 10.5 15 8 Op 1 24/0.000 - CDS 13174 - 14055 266 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 16 8 Op 2 . - CDS 14055 - 14999 816 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - Prom 15025 - 15084 1.9 17 8 Op 3 . - CDS 15095 - 15496 313 ## ACICU_01293 hypothetical protein - Prom 15677 - 15736 6.1 + Prom 16318 - 16377 12.3 18 9 Op 1 . + CDS 16585 - 17277 369 ## ABBFA_002240 hypothetical protein 19 9 Op 2 6/0.000 + CDS 17294 - 17797 600 ## COG3516 Uncharacterized protein conserved in bacteria 20 9 Op 3 4/0.200 + CDS 17790 - 19271 1610 ## COG3517 Uncharacterized protein conserved in bacteria 21 9 Op 4 4/0.200 + CDS 19321 - 19824 630 ## COG3157 Hemolysin-coregulated protein (uncharacterized) + Term 19842 - 19886 7.2 22 10 Op 1 8/0.000 + CDS 19904 - 20380 358 ## COG3518 Uncharacterized protein conserved in bacteria 23 10 Op 2 9/0.000 + CDS 20397 - 22208 967 ## COG3519 Uncharacterized protein conserved in bacteria 24 10 Op 3 . + CDS 22172 - 23170 826 ## COG3520 Uncharacterized protein conserved in bacteria 25 10 Op 4 . + CDS 23167 - 24579 1086 ## ACICU_01302 hypothetical protein 26 10 Op 5 3/0.200 + CDS 24610 - 28434 4086 ## COG3523 Uncharacterized protein conserved in bacteria 27 10 Op 6 1/0.400 + CDS 28472 - 29431 848 ## COG3913 Uncharacterized protein conserved in bacteria 28 10 Op 7 . + CDS 29434 - 30201 201 ## PROTEIN SUPPORTED gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 29 10 Op 8 . + CDS 30218 - 30481 367 ## COG4104 Uncharacterized conserved protein + Prom 30528 - 30587 5.0 30 11 Op 1 . + CDS 30704 - 33382 1246 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 31 11 Op 2 . + CDS 33406 - 34500 891 ## COG3515 Uncharacterized protein conserved in bacteria 32 11 Op 3 8/0.000 + CDS 34517 - 35881 1326 ## COG3522 Uncharacterized protein conserved in bacteria 33 11 Op 4 . + CDS 35899 - 36705 786 ## COG3455 Uncharacterized protein conserved in bacteria 34 11 Op 5 . + CDS 36718 - 37320 373 ## ACICU_01311 hypothetical protein 35 11 Op 6 . + CDS 37388 - 38281 961 ## ABAYE2399 hypothetical protein + Term 38337 - 38367 0.2 36 12 Tu 1 . - CDS 38284 - 39135 751 ## COG0583 Transcriptional regulator - Prom 39217 - 39276 7.1 + Prom 39202 - 39261 8.9 37 13 Op 1 1/0.400 + CDS 39287 - 39955 742 ## COG0666 FOG: Ankyrin repeat 38 13 Op 2 1/0.400 + CDS 39971 - 40453 553 ## COG0590 Cytosine/adenosine deaminases 39 13 Op 3 . + CDS 40453 - 41631 885 ## COG2807 Cyanate permease + Prom 41668 - 41727 3.8 40 14 Tu 1 . + CDS 41765 - 42922 972 ## COG3214 Uncharacterized protein conserved in bacteria + Term 42965 - 43002 1.6 - Term 42946 - 42996 5.6 41 15 Tu 1 . - CDS 43002 - 43460 385 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 42 16 Tu 1 . - CDS 43775 - 44434 554 ## COG1636 Uncharacterized protein conserved in bacteria - Prom 44456 - 44515 10.2 Predicted protein(s) >gi|333032546|gb|GL891880.1| GENE 1 97 - 657 374 186 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002256 NR:ns ## KEGG: ABBFA_002256 # Name: not_defined # Def: TetR family regulatory protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 185 1 185 186 340 97.0 1e-92 MPNLEASFRALRVLHTAKDLFNQYGFHKVGIDRIIAESKVTKATFYNHFHSKERLIEMCL TFQKDGLKEEVFSIIHSYRELMVFDKLRKIFYLHANLEGLYRLPFKAIFEIEKFYPTAYK VVVDYRNWLVTQIHGLLLTVKPAALIEDAHMFLFAIDGAMVQLLSKEETDERDKLLDYFL RKLSEY >gi|333032546|gb|GL891880.1| GENE 2 717 - 1148 477 143 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01279 NR:ns ## KEGG: ACICU_01279 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 143 1 143 143 272 100.0 4e-72 MLKTQKINIIQEFDAPIDKVFAALSEHENLSKLFAPAKVTRISNGKDARNGVGSARKMSI PFTPSFVETNLVYKENELIEYAITSGISPIKAHRGVMQFTDLGNNRTRLNYTISFKGRVP FIGPIIKAALQNGVSRGLKKLKF >gi|333032546|gb|GL891880.1| GENE 3 1401 - 2564 1289 387 aa, chain + ## HITS:1 COG:PA2188 KEGG:ns NR:ns ## COG: PA2188 COG1063 # Protein_GI_number: 15597384 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 1 387 1 388 388 608 75.0 1e-174 MRALTYHGAEDVRVETVADPIIQEPDDIILRVTATAICGSDLHLYRGKIPKTEHGDIFGH EFMGIVEEVGPAVTAVKKGDRVIVPFVIACGDCFFCQLDLTAACETTNTGRGAIINKKQI PPGAALFGYSHLYGGVPGGQAEYVRVPKANKGPFKVPGSLSDEKVLFLTDILPTAWQAVT NAQVKRGSTVAIYGAGPVGLLSAACAKMLGAEKIFMVDHNEYRLNYAAATYDAIPVNFDE VDAAEFIIQNTDNYRGVDAVIDAIGFEAKGSVIETVLTNLKLEGSSGAALRQCIAAVRRG GVVSVPGVYAGPIHGFLFGDAFDKGLTFKMGQTHVHQYLPQLLELIERGELTPETIITHR MKLEDAAEGYRIFNEREEDCRKVILLP >gi|333032546|gb|GL891880.1| GENE 4 2878 - 3618 699 246 aa, chain + ## HITS:1 COG:CC1827 KEGG:ns NR:ns ## COG: CC1827 COG3665 # Protein_GI_number: 16126070 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 12 242 51 278 279 125 33.0 7e-29 MNTASYHNNQAIWTELLPGGHHWSGRIQKGTILRFTSLGAQANVSLFCVNAADVLERFNM PDSLKGQHTAYLKASNVLYSDLGRVMASIVRDDHGWNDALCGPSRPEQIEKQFGTRTFQD ARNDMYQNGLDSLLIEMCKYGLASQDLSATVNLFSKVAPDENGALSYVSSDNTNQNIELR FEMDCLVFLSAAPHGLDTSPIYQPADIQISLFKANSLTDSDICRDACSQNQRAFQNTARY YALSNI >gi|333032546|gb|GL891880.1| GENE 5 3634 - 4287 583 217 aa, chain + ## HITS:1 COG:CC1828 KEGG:ns NR:ns ## COG: CC1828 COG3665 # Protein_GI_number: 16126071 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Caulobacter vibrioides # 11 213 12 208 208 214 50.0 1e-55 MTVLQSFEKAVLNEVCPAGEAWMCEVKKGQYFRIIDLEGNQAVDTLFMSAENPTERYSAM DTLAINQQIYLEKGTKLYSNLGRPIAVIHDDNCGRHDTIGGACSCESNTVRYAHETYPMH SCRNNFMYALAKHPIAKKHGLNVRHIGPNINFFMNVPVTPDGQLKFDDGISGPGKYVEVR AEMDLIVLISNCPQLNNPCNAYNPTKIQLVVREAEGV >gi|333032546|gb|GL891880.1| GENE 6 4290 - 7895 3691 1201 aa, chain + ## HITS:1 COG:CC1829_1 KEGG:ns NR:ns ## COG: CC1829_1 COG0439 # Protein_GI_number: 16126072 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Caulobacter vibrioides # 1 443 1 444 448 486 57.0 1e-136 MFKKVLIANRGAIACRVIRTLKKLGIASVAVYSEADRDSLHVTLADEAFLIGPAPAHQSY LNIEKILEVAKQSGAEAIHPGYGFLSENAEFCDLCESQGIAFIGPTSSQMLDFGLKHTAR ELAIKSNVPLLPGSSLLSDEAEALTEAARIGYPVMLKSTAGGGGIGMRLVWNETELKDAY QTVSYLAQVNFKDAGLYLEKFVQHARHIEVQIFGDGKGQVLALGERDCSVQRRNQKVIEE TPAPHLNEQQRDYLQKVAIQLMQSVNYRSAGTVEFVMDTETQEFYFLEVNTRLQVEHGVT EQVFGVDLVEWMVTLASGDWSAPTEKLEPTGHSIQVRLYAEDPIKQFQPSAGLLTHVKFD PQARVETWVETGSTVSSFYDPMIAKIIVTAATRDQAIQAMSASLANTQVAGIETNLEYLQ NIIACDVFALGTQTTRFLNTFEWKTQKIEVLQAGIQTAIQDVTGRLGYWDVGVPPSGAID PLSLTVANQLLANEPNTAGLECTLQGPTLKFHCDSQIVITGGDMPSKLDGELVPMWQTIN VKKGQILKCGIIRSGCRSYIGVKGGFEVPDYLGSQATFTLGQFGGHAGRNLLIGDMLPIT EYSAQSTTALAQAQIPSFTQNWEIAVMYGPHGAPDFFTKQDIDTFFANEFEIHYNSSRTG IRLIGPKPEWAREDGGEAGLHPSNIHDNAYAIGAIDFTGDMPIILGPDGPSLGGFVCPAV VIHSELWKIGQLKAGDKVKFVPVSYAQAKALDQKYYQSLTATDTTQIGFNPAIQAEPDTL KDAVLATLDGDAGLPSVTYRPAGNSYLLVEYGELVLDLNLRFRIHALMQWVKDQNIQGII DLTPGIRSLQIHFNSIQLDQLELLQKLQQAEAELPDIQNMQVPSRTVYLPLAWEDSQTQL ATERYTQIVRPDAPWCPDNVEFIRRINGLASKQAVKDVVYSANYLVMGLGDVYLGAPVAT PLDPRQRLVTTKYNPARTWTPENAVGIGGAYMCVYGMEGPGGYQFVGRTTQMWSRYRKNA NFEEGKPWLLRFFDQVKFYEVSETELLQMREDFKAGRLQLRIEDGVLNLKEYNEFLKTHQ DSIQAFKDMQQANFEAERRRWHEAGLQEYISESLDAVDEGETVVIPEGGCAVESHMPGSI WKIECASGDIVEEGATLAVIEAMKIEIPIIAPERMKVETITIEKGQTVKTGQVLFTLAPV A >gi|333032546|gb|GL891880.1| GENE 7 7934 - 8470 660 178 aa, chain - ## HITS:1 COG:yabF KEGG:ns NR:ns ## COG: yabF COG2249 # Protein_GI_number: 16128040 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Escherichia coli K12 # 1 113 1 112 176 111 46.0 8e-25 MALLILAHPYYAQSIANKTIVNELVKTYPDLEVRDIFQLYPDYKIDVSAEQEALLRHDTI ILQYPMFWFNMPAILKLWFDEVFTYQFAYGSQGDKLKDKKVIISMTVGQKEANMVNDQEN LIDSFLKSVQHSIQYTQMQLSGTFLLYDVSPLSGNPESKIKLEAVEHGHKVLKHLTEA >gi|333032546|gb|GL891880.1| GENE 8 8563 - 8766 220 67 aa, chain + ## HITS:1 COG:BH0737 KEGG:ns NR:ns ## COG: BH0737 COG1733 # Protein_GI_number: 15613300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 19 67 14 62 118 67 57.0 6e-12 MANTENKCEITMNGKTYPCHISMAMDLVGGKWKGVILYYLKDGPKRFNEINQLMPTITEM TLSLQLK >gi|333032546|gb|GL891880.1| GENE 9 9031 - 9543 475 170 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01286 NR:ns ## KEGG: ACICU_01286 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 170 1 170 170 310 100.0 2e-83 MFFYLLTPTYAQEVKYKNIVVNLKDQWDISKGQNEELIAIKQASKQAIIISIYYPKGIEE GMQYLVASLQIPKQGLVKMKGVTLVNEDINIPLSNGMNYQANVFTTNFDKRFLISASSGT NAGVILVTYEGEGNDTNKAINDFKSLINNIKIEAPKDGFLFNQNDLLKHN >gi|333032546|gb|GL891880.1| GENE 10 9570 - 9713 57 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332874569|ref|ZP_08442470.1| ## NR: gi|332874569|ref|ZP_08442470.1| hypothetical protein HMPREF0022_02089 [Acinetobacter baumannii 6014059] Hypothetical protein ABK1_1733 [Acinetobacter baumannii 1656-2] hypothetical protein HMPREF0022_02089 [Acinetobacter baumannii 6014059] # 1 47 1 47 47 76 100.0 7e-13 MHGAFSCPKITHKFLPSPSKPRLKTGTFSASLISNTKTEFGNTKLEV >gi|333032546|gb|GL891880.1| GENE 11 9715 - 9840 79 41 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01287 NR:ns ## KEGG: ACICU_01287 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 41 1 41 41 62 100.0 6e-09 MNDVKPVVQPKQTLKAFLVQLLSVRAGVYIKQNNQLPKTKG >gi|333032546|gb|GL891880.1| GENE 12 9845 - 10279 503 144 aa, chain + ## HITS:1 COG:PH0601 KEGG:ns NR:ns ## COG: PH0601 COG0864 # Protein_GI_number: 14590497 # Func_class: K Transcription # Function: Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain # Organism: Pyrococcus horikoshii # 5 130 2 128 138 87 36.0 7e-18 MAKQKLARISITVPESTLNALDQKIVEQNYESRSQAIVDMINKHLIAEQAQANEVMVGTL TLLYDASQMTLRNQLVDLQQQFLAQVISSLHIQLDQQKILQVMLMQGASSELRQISQQFI VLKGVIKGHLELMDAVMPPIQQND >gi|333032546|gb|GL891880.1| GENE 13 10295 - 12103 1726 602 aa, chain + ## HITS:1 COG:YBR208c_1 KEGG:ns NR:ns ## COG: YBR208c_1 COG0154 # Protein_GI_number: 6319685 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Saccharomyces cerevisiae # 5 585 15 622 631 456 44.0 1e-128 MKNLWTIQDWKTAYQNGQIHLADLIGYVAEIKNDDHAWIEIASNNQIQAQIDVLKDQNIA DLPLYGVPFAVKDNIDVADFHTTAACKEVQYLANQDAAVVAKLKKAGAIVVGKTNLDQFA TGLVGVRSPYGAVKNSFNPEYISGGSSSGSSVVVANGIVPFSLGTDTAGSGRVPAGHNNI VGLKPTKGWFSTTGLIPACRTIDVISIFALHIDDAWTVASLMQGYDETDEYSRVHPANVP TQFSKRKIAIPAQLEFYGDLESEKAFLVAVERVKKLGYEVESIDFSAFNELAAALYNDAW VAERTVAVERMTTREKAHPVIAQIIAQADKFKATDALQAEYNRAVLARKINLALQPFDAL MVPTAPTIYTIAEVEADPLTKNAHMGAYTNFVNFADLSALALPNILREDGLPSGITFIAP AWHDQALANFAQLWQAETSLSLGKSTQHYQKSLEIQSNHSVQLAVVGAHLTGMPLNFQLT SRNATLLKKTQTAETYKLFALKNTSPPKPGLQCDAAGTSIEVEVWDVPLANFGAIVAEVP APLGIGNLKLKDGTWVKGFICEAYAIQDATDISHFGGWRAYIQSLNQTAQSVVSKNVGEV SI >gi|333032546|gb|GL891880.1| GENE 14 12100 - 13122 1142 340 aa, chain + ## HITS:1 COG:sll1080 KEGG:ns NR:ns ## COG: sll1080 COG0715 # Protein_GI_number: 16329887 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Synechocystis # 1 296 11 305 352 154 32.0 3e-37 MIKKALLSVSILSAVVLGGCDNTAKVSEAKQDAQAAANTKPITIGYSDWPGWVAWQVAIE KGWLKEAGLNVEFKWFDYSASLSAFSANQLDAVLVTNGDNLVTASGGTQGMMIMATDYSA GNDVIIAKEGINTIQDLKGKSIGVEKGLVDHLLLATALTDHNIKANEVKLVNSATNQLPQ VFNSPDISAIAVWQPIAGQALKAVAGSKIIYTSKDKPGLIYDTLTVNMSHLIAHQDEWKK IIQVWDKTVKYINDPATHADAVKIMANRSGVDPKQYELMVSGTHLLDINANKKVFTKSQD FDSIYGSSYHVNKFNVENGIYKTEQNVDGLIYPTLIEQLK >gi|333032546|gb|GL891880.1| GENE 15 13174 - 14055 266 293 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 32 259 10 236 245 107 33 2e-22 MNDSTFNAHEYFQKIYERPVILEAKQLSQVFKHGQTEHTVLNKLDLKIHKREFICVIGPS GCGKSTLSRVIAGLDPYHSGEVLVDGECITGPCPERGMVFQGYTLFPWKTVKENVMFGPQ MRGASQMTAEAQAREWINIIGLEKYENQYPHQLSGGMKQRVAIARALVNQPKILLMDEPF GALDPHTRQKMQKHLMDLWQNIDITIIFVTHDMDEAILLADRIVALKANPGEIKEIIEVN LPRPRSLDLMSTPEFKQLRSRVDYLVHAEEDELDPALQDLPKIPRMTQVSTEK >gi|333032546|gb|GL891880.1| GENE 16 14055 - 14999 816 314 aa, chain - ## HITS:1 COG:mll1254 KEGG:ns NR:ns ## COG: mll1254 COG0600 # Protein_GI_number: 13471315 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Mesorhizobium loti # 122 312 69 259 259 137 39.0 2e-32 MGYVAKEFTQKNKLILSICSFVIPICLWCAISYLPFVWHPQVQITSSGSVPYLQVGSRVD KNVFYLEAQNAVNRNSAPPQGILVNPIYLPAPHEVAKALVTAFTTPPEQPDSPWFHQSLW HSIKLVFSAFFISSLIGIPLGILCGFSKRISLLTEPFVEFFRYLPAPAFGALAVAILGIN DAPKIAIIVIGTLFQQILIIANTTRTVDRSLIEAGYTLGTNKLKSLFHVVIPAALPDIYR DLRVLLGWAWTYLIVSELIGTTSGITWFITQQARYQNFDNVYAAILIIGVIGLVCDWVLM KLGERMFTWKVGAK >gi|333032546|gb|GL891880.1| GENE 17 15095 - 15496 313 133 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01293 NR:ns ## KEGG: ACICU_01293 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 133 1 133 133 241 100.0 9e-63 MSNQMDQAIQSVIDLHVLIENVFTGQNAEQSLTPLLNSFDQNFKMVTVQGQSIGLAEVKN LFSQNIGKKPSLKITILKSTALYEFENYCWVQYQEHQQTDETETVRTSTACIKVEDEKCY WVYLHETLVPSSS >gi|333032546|gb|GL891880.1| GENE 18 16585 - 17277 369 230 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002240 NR:ns ## KEGG: ABBFA_002240 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 230 1 230 230 376 99.0 1e-103 MKVVLKRSILILFLTGNIIGLSYAQAAELEPVKLKKSCIKKNPLAEGQNDPELLNIFKQV CDSDNTTQKNDLLAKAAMRFYQTNQPVKALNLASQLQSQNIRGSLITDVLFLSGVSIANN SLQQMRNQEMRYLTNDITYPPAKQLVENIHTAMPAPDPSSFKTNNSESSSTDNEKRNYKK QYATRNKVSASRTSNKRVVSPAKATAVKPKTAPAATVNKSKSSPFDPLIK >gi|333032546|gb|GL891880.1| GENE 19 17294 - 17797 600 167 aa, chain + ## HITS:1 COG:RSp0743 KEGG:ns NR:ns ## COG: RSp0743 COG3516 # Protein_GI_number: 17548964 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 165 1 165 170 189 63.0 2e-48 MAKRESVQKKLQRIRPPRVQLTYDVEIGDAKEAKELPFVVGVMGDFSAASELERTKLKDK KFINVDLDNIDEVMESLSPRAAFQVDNTLTEEGGKMAVDLTFKSMEDFRPENVVQQVDPL KKLVEARERLTDLRNKISNSERLEDLLDEVLKNTDQIRKLSAEADHE >gi|333032546|gb|GL891880.1| GENE 20 17790 - 19271 1610 493 aa, chain + ## HITS:1 COG:RSp0744 KEGG:ns NR:ns ## COG: RSp0744 COG3517 # Protein_GI_number: 17548965 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 15 493 17 495 496 710 68.0 0 MNNTQSAAMPLVENEEVNLLDSIVEQSRIARNEEEHSRAKSLIGELAKEVMAGTITVSEN MTLSIDKRIAEIDALISKQLSQIMHNEQFQKIESTWRGLYYFCQETPSNPLIKIRMLNTT KKELVKDFQGATDFDQSTLFKKIYEEEYGSFGGAPYSALIGDFEFDRTPSDMYLLEQISH VAAAAHAPFISAASPSILGLESFTDIDRPRDVSKIFETAEYVQWRSFRDSEDSRYVALTL PHVLGRLPYHPKEGTATEGFNFIEDVSGENHNEYLWMNAAYAFGTRLTNAFDMHGWCAAI RGVEGGGLVEGLPVHTFKTQDGEVVFKCPTEIAITDRREKELSDLGFIPLVHCKNTDYAA FFGAQSTQKPKKYDNDTANANSALSSQIQYIMAVSRIAHYLKAMMRDKVGSFASAGNVEA FLNEWLSQYVLLDDGASQEAKAQYPLREASVKVVEDPAQPGHYKSVVFLRPHFQLDELSV SLRLVTELPQSSN >gi|333032546|gb|GL891880.1| GENE 21 19321 - 19824 630 167 aa, chain + ## HITS:1 COG:RSp0745 KEGG:ns NR:ns ## COG: RSp0745 COG3157 # Protein_GI_number: 17548966 # Func_class: S Function unknown # Function: Hemolysin-coregulated protein (uncharacterized) # Organism: Ralstonia solanacearum # 1 166 1 166 167 171 53.0 5e-43 MKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDM VFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTVNE EGVPTEAFGLKYAAVEWTYNQQDINGTAKGAVTKKWSLSNNTASYAA >gi|333032546|gb|GL891880.1| GENE 22 19904 - 20380 358 158 aa, chain + ## HITS:1 COG:RSp0746 KEGG:ns NR:ns ## COG: RSp0746 COG3518 # Protein_GI_number: 17548967 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 10 155 3 153 157 112 39.0 2e-25 MNLDRLYPYGFRSTLFDRLIPESEDYAKGLSIQQLRESVAKDLEDLLNSRVAKLDHVIDD YPLVKKSILQFGIIDFVGLSTANPLDRDKICQSIEQSIAAHEPRLRQIRVEMLLDGHNMG ALCLSIQAYLNIHPLYEPVVFDALLKPTTQQYVISART >gi|333032546|gb|GL891880.1| GENE 23 20397 - 22208 967 603 aa, chain + ## HITS:1 COG:RSp0747 KEGG:ns NR:ns ## COG: RSp0747 COG3519 # Protein_GI_number: 17548968 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 2 603 1 616 616 370 35.0 1e-102 MIEELLPFYEKQLQEFGQQSREFAQKYPKIAQRLSLNQEQIDDPHIERLIQAFSLIAARI DKKLTDSYDVFTRSLFEVMFPQYLRHFPACSVVSFEDINKIKQLTEPHLVPHHTVLKSRS FKGVQCEFNTTQEVKLLPIHLSGLDFKTTPSAHMHLNQNATLSLKFEIFNNAHACLTDEK LPIYLDAISNFPLQVLDSIFKKGTSFAVKYGQTIVELSKNPFELIGFAEQESLLPLDQHT HHAYRLLMEYFCFPEKFSYLKLDLDFLRRLPQHVSEFELLIHFKLNLNDQAVVRNYSELN IANFKLFTTPVINLFEKYAEPQKIVHKQLEYPLVTDAHHPEFYQVYSILEMNMVREKTNQ EESYVPVLPFFAMSHYHNDTARFFYSVNYQKLQSNFVEMGYSIISKNLNPFSTRSDFIST KLLCSNRDLPHEALGQSNNVLNLNDSSLARRAIVLKRPTKPYKFEQGQSEQWRVISHLSL NSLALMKGDAVSHVKELLALYNLPQSKENYLIIESIKKLEFSLTHKLVDGKPFPMFVRGV KAELQIDSSVFRGHSLYIFSQLLSRVFNLKVQINSFVDLVVKDYSSQQELYQCSQNVGGK TLL >gi|333032546|gb|GL891880.1| GENE 24 22172 - 23170 826 332 aa, chain + ## HITS:1 COG:RSp0748 KEGG:ns NR:ns ## COG: RSp0748 COG3520 # Protein_GI_number: 17548969 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 327 1 359 363 128 26.0 2e-29 MQSERWWQDSSVTAELFQRPKSFEFIQATRLLRHMPANDAALSWSDHFKFETSFNLNFPA TEIESLELVDERVHLTNLIVGLTGIQGALPYTYTNKIKQAPRQQRAETKEFLSLFNHKLT SQYVESSITYHLPVRYEIENKNDYLDILHALNGYVRSQHQQQDLDEYFAEFSGLMQGQNN TVHALKTMLSCIFKHEITIKEFVQESFKLAGDQLTTLGGSQPSLLGINTFCGETIQQIDG KIEIQIGPLKRQQYLKFLPHQELSLKLKKIVETWCSPTLSIDLRLILDETEIQPVRLTQG QESGLGQGAFLMSRKPNTHNDETCYSLIGEQI >gi|333032546|gb|GL891880.1| GENE 25 23167 - 24579 1086 470 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01302 NR:ns ## KEGG: ACICU_01302 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 470 1 470 470 872 100.0 0 MIKKILLSFIAIFTVVSGIIIFYWRDVQYNPNKIDFFLYFLLLPAIITLVILSPWLIYSV YKSYKEKKEQAANQSQDDDSQKSSAAIEQPLEQLDFNVYSAFAIHALGENETIIEEIQNF KSPELDEQLLNSYGLPLLSYRIKDLAETNDEDIQYAASPRQVRIMSLIRQQLEQNIENLY RLAEHLKRSILFYESHQIREYHMHPAWVDPNSEYEDVETPVVEVHRLNRLNLHIFLPEDL LHVWNDEQSNDLILEFFTEIGIISQKVHIEYHFLGERVAYQEFIHLLKRIQKKEHEVFLM LAVDSEIDQDLIDEKSWMVKDYIPAEFAASCLLADPSLKIEELEPAKNLKIVVGQEKAAK VLHTLNLNELPQYEGDEPYVLILSDQTDIKTAKQLQQQFAQTSVEPHHYIYVKSSLGHTQ HLVDIYGFMLSMHFPEHIVPFVFGENTVSAHTFVQSVTENSEDDAMVLNS >gi|333032546|gb|GL891880.1| GENE 26 24610 - 28434 4086 1274 aa, chain + ## HITS:1 COG:RSp0763 KEGG:ns NR:ns ## COG: RSp0763 COG3523 # Protein_GI_number: 17548984 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 71 1250 73 1284 1313 983 42.0 0 MHTILGYLWQYITNPKAIIALSLFVALMSSYTSIPRHIFWALASAYALGLIAYGIYWLIQ RKKHAVQGEELAQAIEKDTQAEYGKNKDKEELQLISQQMKESIQLIRKSKLGDKKGNAAL YELPWYMVIGNPAAGKSSAIYNSGLKFPFEETHQKMVSAGLSGTRNCDWFFSTEGILLDT AGRYSVYSEDHSEWLGFLNILKKNRSKAPVNGLILIVSIAELVSQSPEHSLKLAKNLRAR IQDLTERLEVVVPVYLVFSKMDLIAGFTEFFEFYEAQEYNQAWGATLPYEQNSSHNAVDL FEKHYNILYDGLKGVSSTHLSRRHSQNISPSVMTFPLEFKTLKPALKSFIATLFEDNPYQ FQPVFRGFYFTSALQEGVIESPMTEQIAQEFQLSQIAQSEVKDQLKTTPNHGYFLKGLFS DVILKDKDLVKQHVNTSKKRQRYIAFIGALAGVSIILGVWVWSYRNNQQLIAEVQADLNK VVQLEKSSGQQLSTQLEALLILQRRLQQLDEFDENRPLKFSFGLYQGNELREKLKAEYLK GVKQIVLIPTQQNIAQYLQRVKNNEATLKANHTNVEIKQTAQTQQYLEPSDTNPQDAYNA LKAYLMMSNPQYMDASHLSDQVTRFWRSWLDANKGQMPRADMIQEAEQILSYAMTLANDK QFPILDADSQLVDQTRQVLLSVIRGMPARDRVYNEIKMRAAVRFPALTVNQIVGDANKNI VLGSYALPGVFTQKAWNEYVEKAIEEAADKPTDTKDWVLNSRQSDDLTFSGSPEQIRKQL TALYKQEYIAEWRKFLSGIHYAKATQFAQQVKNIDVLGEPQNSPIRMLIERVAIETNWDN PVVQAELAAPQKGFIAWFKRKVLNHDDKQLANQAVTNAQGPISQEYQMFYQLVRKRDDQQ GKSLLDEYMTNLALVRSKFNELKNAGEIGPNAMTLVKQTLNEQTSVFNQTQKIVDEKMAV GFSEIDQQLLQKLVVSPLTQAFESLITPTQDEINKLWVMQAYQPFTANLAKKYPFNSSAS LQATSSEIGQILGENGSISRFVKESLDPFVIRRGYTLTSKTWKDLGISLNPQFVMNFQRY VAPTNGMATGELNSQAPAAPATNQSNFQFYPIQNPQLLSYTVDIDGQRMTYENGVQQWVN FIWPNQGSIPGARITAVDLQGQTHTIFDEPGEYGINRLIDSAQRKEQNGGFEMLWRSKTD PSLFVKMNFRLISSNSGSIGSSRGYSGMQLVDKVTADKAARVVSAQQAPAQAAAPAKTEN PVSALAQPAAGVKP >gi|333032546|gb|GL891880.1| GENE 27 28472 - 29431 848 319 aa, chain + ## HITS:1 COG:RSp0762 KEGG:ns NR:ns ## COG: RSp0762 COG3913 # Protein_GI_number: 17548983 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 10 319 10 328 328 130 25.0 3e-30 MHTLKTTPLYYGKSPARGDFLKTKGQYALIQVLDQWITEALEYAMQSNMFKEAYSKLPSL DFFIANPQENMFLAANLLASEDSSGRAFPMVLSHLLEIDLPYENLLYAPYSYKHVLVDLF QNNRALRGIKDSDLLFGKLNHLPNQIQVLSERECVGFYENHTMHSFAQLMKLSIYELAQS MIGLGLLLQPILQNGTSRLNKVLILPINNPAYCYEIAAFWVSIICRFLKQHNTEVLIGLL HREQPVLFFGFQGADILALSDIFTQNMDSKHWVSLIQAQWIDTYLEQNAGLATLEQSLCQ RQLSLNQGLKLFRQTFLGE >gi|333032546|gb|GL891880.1| GENE 28 29434 - 30201 201 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1] # 116 251 199 343 347 82 31 6e-15 MNQKYQIKLSQLIKGCFIYAIANYALAQPIVVEGVVPNEASKQAILMKMQSVYGADQVVD KIQVRPVAAPNGWSDSVTRVITPDLKKVSQGKLSVNGTRFELTGKMLNPTEIQPTIQSFQ SLVQPPYQLFSQLSVNQAEQKIIDDALKNRIIEFESGSAVLTEAGQKILDEMAVALNKVG GKKVKIVGHTDSSGDATKNLKLSQDRALAVKNYLISKNIPADHLSTEGLGSSKPVADNTS AEGRKKNRRIEFTVL >gi|333032546|gb|GL891880.1| GENE 29 30218 - 30481 367 87 aa, chain + ## HITS:1 COG:RSp0765 KEGG:ns NR:ns ## COG: RSp0765 COG4104 # Protein_GI_number: 17548986 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 81 1 83 89 57 44.0 4e-09 MASPYITIGCPTTGGGQVISGNSAFLIEGIAIACVGDKATCPAHKTVSTIVSGDPNMQVM GKAAARVNDSLSCGCKLLPKQSLVNQG >gi|333032546|gb|GL891880.1| GENE 30 30704 - 33382 1246 892 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 34 868 29 806 815 484 36 1e-136 MSSLKILITKLSTAARTALEKSANACVLQQNYEIEIEHLFLELLNQPLENDLKILLKKYK ISADALADDLKETISQLPKGNTRTPIFAKSIVRLFEQAWLLASAEQNPVIRSGHLLVALL TAPDLYQIATRASSLFDLFPIDSMKHKFLEICEKSVEQQEESKTSSQADELEQAVTPTAK TQKTPALDQYTINLTEKAKNGGIDPVIGREYEIRLMLDILMRRRQNNPILTGEPGVGKTA VVEGLALKIAQGLVPEALKNVHLHVLDMGLLQAGASVKGEFENRLKQVIQEVQSSAHPII LFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRFQ VVKVEEPTEEVAVDMLRAMIPVMQKHFNLQIDDEAIVTAVHASHRYISGRQLPDKAVSVL DTAAARVALTQNAQPVKLDQLKAQEHNLKLEQQILENEHRQIPIHHERLENLKSQLESLQ SEIQETQEQWQKELELVRKIQELEAQSHSNESEAYDQINLIRKDLADIQGQQPLVFERVN SQIINEIISDWTGIPVGKMVNDEIKQILTLEDKLGERVMGQDYALTQLVQGIKTSKAKLE DPNKPQGVFLLVGPSGVGKTETALALANELYGGEQHLITINMSEYQEAHTVSSLKGAPPG YVGYGQGGVLTEAVRRNPYSVVLLDEIEKAHSDVQELFYQVFDKGTLEDGEGRVIDFKNT TILLTSNTGSSAIMQACLNQPVEEWPTAEDLIEHLKPSLYKQFKPAFLGRMRVVPYFPLH DDLLVRIIKHKLGKITARIEKQYGTEVQYSDDLVELLLSRCTEVDSGARNVDNILNSTVL PALATEILVALADQKLPKLIMIDAKDDEIQYLLDPVAKPAKKRTSKKLKSEV >gi|333032546|gb|GL891880.1| GENE 31 33406 - 34500 891 364 aa, chain + ## HITS:1 COG:RSp0759 KEGG:ns NR:ns ## COG: RSp0759 COG3515 # Protein_GI_number: 17548980 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 24 357 3 328 337 184 34.0 2e-46 MSIDISELLKPINDSLLCGEDYSFSNEFHEIKKARTQDDLLLDQGDWVAERKQADWDFVA KSVSTLLIEKTKDIRLLTWVIEAWTHLNGFEGMVKGITLTHTMLNQYWQDIHPIIEDDDL DQRIGLLQGLINQLPMLLKKVPLTNTAPYYNLLDYDNFLYHENIRRKQTEEYESQSGPSE LEQFDQAIFNTSKTFQYSNYQEFNSVLTEWNVLKQTLDHLMGLDSPSFAAIDSAFETIHS TLRKIYKAEAFGTGLAPSQEQAAVITTPSMENQVPVQIVSDQPMFQPQAQTHLANREQAM KVLQEIADYFQANEPHSPVSYMLQKTIKWSQMPLHEWLAQVIKDEHPLQMVQEMLGVQPK NEYE >gi|333032546|gb|GL891880.1| GENE 32 34517 - 35881 1326 454 aa, chain + ## HITS:1 COG:RSp0740 KEGG:ns NR:ns ## COG: RSp0740 COG3522 # Protein_GI_number: 17548961 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 451 1 446 448 382 44.0 1e-106 MFKAEKVLWGEGLFLRPQHFQIQDTYHEQRLNHTVRAVVPFSYGVQKLSFDEAQLSTHIL ALESVEMIWQDGEIYQAPAYDLLPEPILLDELNLRGEMVIYLALPLLQANKQNLIDQNQS QKGRYQSHLVETHDLFTNATEADISLLRRRAVFKLLDAHSNPDHNLDGFLYLPIGKIKRQ SSGAFEIDRKFIPPILHVDASETLVSNLKRTLNVIKAKIKTIQTNNRENEQKLIEFRSGD IVSFWLVNALNTAHAGLSHFLQYPQIHPERLFFELLRLAGSLLTFSTAYEVDQLPAYKHH NLQESFTQLDTILRDLLDTIISSRYISIALKEIRPSYWVGSLETDKITRDTRLYIAVSSS VMQTHELIQIVPLRFKIGSTLDVEQRVVAALPAIPLHHLIQVPTAIPVRSGVSYFEIELH HELYQRMLDSETICIYVPAGFQDISIELIAVMNA >gi|333032546|gb|GL891880.1| GENE 33 35899 - 36705 786 268 aa, chain + ## HITS:1 COG:RSp0739 KEGG:ns NR:ns ## COG: RSp0739 COG3455 # Protein_GI_number: 17548960 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 4 268 3 263 263 209 43.0 5e-54 MSQSTGAPSLFDDGQIGTGGNNNSQSQVKLQAINLIDLLHDGFYLIFLIRNQYVPADPQR FREKILDLLNRFEQQAKKLQFSADDIHDAKYAFCALIDETIVTQQDPSYFNLQNSWLISP LQLSLFGSQLAGYQFFEILEQLRSRGKDRLAALEVFHYCLLLGFQGKYRIESIESLNHLV ARVGDEIDYLKGKKVAFSPFSAIPDQIRNIIHRELPFFWILIFLLIFALLTFAGLRFMLN NQNDKALSNYQNVISAPQEQAHITIYLP >gi|333032546|gb|GL891880.1| GENE 34 36718 - 37320 373 200 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01311 NR:ns ## KEGG: ACICU_01311 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 200 1 200 200 259 100.0 5e-68 MAQEKPTSIRVLQSNKKKSRSPVIYIIIGIIAGVFVSISLFLFLSQPYSSDPTSVESKSN QDQELDQVLMTNSSAHDQAVSDQQEQTDPMSHDGFEQPKENELSNIFKPAPHKEAEPNPQ RVSPFDAQLTGEQVVPKQQAVAKPVQPKLQVVQQKPATQTKVVQAKPAEVNKAPVEQEAD VEPPKASVDIKITRSPFAVN >gi|333032546|gb|GL891880.1| GENE 35 37388 - 38281 961 297 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2399 NR:ns ## KEGG: ABAYE2399 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 297 21 317 317 595 100.0 1e-169 MSYELRNKGRTFVLSLLPQGRRQLNQVRQFAQTMNQAAAPEKLQSHWHLQQWWIVIAGFF LFASILIFAFTRPISSTRIEAEYLKKTDPQIYALLNGEILSPPPEVDESLIEAAIVEATQ LEQQYASQESGVINSSPIDNTSFDGRAILDTSLVNRKWDKMNPRYKQRLLMVFKIMKEQY GYELVLLEGYRSPARQNMLAGNPNTTRAKGYQSYHQFGLAADVAFKRNGKVVISERDPWA MQGYRLYGQVAESVGLTWGGRWKSIQDYGHTEYRMPGLKKTQEMAEKLIAESLNDIS >gi|333032546|gb|GL891880.1| GENE 36 38284 - 39135 751 283 aa, chain - ## HITS:1 COG:PA2497 KEGG:ns NR:ns ## COG: PA2497 COG0583 # Protein_GI_number: 15597693 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 231 1 234 292 196 44.0 3e-50 MFDPRLLRAFVTIFESGSFTAAADKLHLTQSTISQQLARLEESVGHSLIDRTARPLQLTA SGEYLIGYAQRILTLQQEAEAVLKDPAGSIPIRIGLPEDMMSTAMAEVFGLFAQEHRTIR LDVTSGLSRNLTERYRNGELDIVIVKESAASADCYASFPEEMAWFESENAITPLSEPIRL VTFPQGGLYRDEMFETLERERRRWYIAFTGSSLESVLVSVETGLGISLLPVSTTKGRRVR RYKSLGEASPMVVSIYTWEKAGLISQLVDHMTTVLHDRFQSGS >gi|333032546|gb|GL891880.1| GENE 37 39287 - 39955 742 222 aa, chain + ## HITS:1 COG:SMc01158 KEGG:ns NR:ns ## COG: SMc01158 COG0666 # Protein_GI_number: 15964114 # Func_class: R General function prediction only # Function: FOG: Ankyrin repeat # Organism: Sinorhizobium meliloti # 43 221 18 196 201 232 69.0 4e-61 MRKSLIWINLIIAMGALGFTNVVNAKDEYPLHMAAANDDIQLIKHILSQKTLIDARDETG STALMVATRANNIHAAHMLIEAGADVNAKDNIQDSPYLYAGAQGYLKILRMTLMHGADLK STNRYGGTALIPAAERGHVETVRTLIAAGVNINHVNNLGWTALLEAIILGNGKSNYQQIV ALLLKAGANPNLADKDGITPLQHARTRGYREIEKLLLVAGAK >gi|333032546|gb|GL891880.1| GENE 38 39971 - 40453 553 160 aa, chain + ## HITS:1 COG:PA2499 KEGG:ns NR:ns ## COG: PA2499 COG0590 # Protein_GI_number: 15597695 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Pseudomonas aeruginosa # 3 154 2 151 151 175 55.0 3e-44 MKANQEFLRQAIELAYNNIEKGGRPFGAVIVKDGKVIASGVNQILTTNDPTAHAELLAIR AASQVLGTANLEGCSVFASGHPCPMCMAAMRLAGIKTVNYAYSNEDGAPFGLSTAEIYAD LVKPFAEQSMKIECVPVRFEDRTDLYVFWKNYQAKQSGLK >gi|333032546|gb|GL891880.1| GENE 39 40453 - 41631 885 392 aa, chain + ## HITS:1 COG:PA2500 KEGG:ns NR:ns ## COG: PA2500 COG2807 # Protein_GI_number: 15597696 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Pseudomonas aeruginosa # 14 390 25 401 408 246 42.0 5e-65 MKQSGAFLARPMLILTVALVGLNLRPFMTSIGPLVSKIRAGTGLSLQGIALLTLLPMMLM GLIAFIGPIVQSMVGERRVVLGALLTICIGCALRFLFPTAEGLIASAIIIGLGVALIQAA FPGIIKREFSQHIGPMMGLYSAMLMGGGALGAWLAPVISNITGLWSLGLAFFTIPAVLAL VSTFIFLPSIVSSTAHLSPVKTLLKKPRTWLLMLCFGLVNGGYSSVVAWLAPSFQDHGWS ISQSGKLLALLALSQAASALSLPILARKYKDRRPWLWFTLFMQFAGFAGLAFIPEFASVL WVICLGIGLGGCFALTLIVALDHFEEPNNAGALSALMQGGGFLLAAIPPWFVAALHDFTG TYKAGWIFHLCSVILVIVLVVRLAPRSYNKIH >gi|333032546|gb|GL891880.1| GENE 40 41765 - 42922 972 385 aa, chain + ## HITS:1 COG:STM0986 KEGG:ns NR:ns ## COG: STM0986 COG3214 # Protein_GI_number: 16764346 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 3 373 9 387 410 185 34.0 1e-46 MTSSLKKIALLKQGLGKNSPFAAGRQGTLEAIEHLGYVQIDTISVVERAHHHILWSRVPD YDLSHLNSLVRERQIFEYWYHAASYLPMKDYRYALPAMMSVRKGESRYFNRGDQHLMNEI LVRVRAEGKIRLRDIDKKNKESLGNWWNTGPGRRAFEQLYMQGDLMICERNGMEKVYDLT ERCLPENIDLSLPTLYEYAQYLFNNTLRAHGAFTWKQLVHLKKNDLKETMRVVLKEQIDA GVVSAIKLADGQNLYVDVTAIEQQLDTDFGLKILSPFDNSLIHRDRLTSLFEFDYRIECY VPAAKRVFGYFCLPILYQNELVGRIDCKAHRTVKELEVISLHLEKTVKDKEHFFFELDQE LKRFAAFNQCSTVNDKVVKLIRSKL >gi|333032546|gb|GL891880.1| GENE 41 43002 - 43460 385 152 aa, chain - ## HITS:1 COG:PA4166 KEGG:ns NR:ns ## COG: PA4166 COG0454 # Protein_GI_number: 15599361 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 7 151 8 152 152 189 62.0 1e-48 MIQNETIEVSPVQQQDYTQWLEYWVAYQNFYQVNLPLHITKMTWDRFFDEKEPIYCAVAK NKERILGFVTYMFHRSTWAENNYCYLEDLYVSPEVRGRHIGKQLIEYVQKQATEHSCERL YWHTQESNQTAQKLYDWIAQKPGVIQYRMSLN >gi|333032546|gb|GL891880.1| GENE 42 43775 - 44434 554 219 aa, chain - ## HITS:1 COG:XF2273 KEGG:ns NR:ns ## COG: XF2273 COG1636 # Protein_GI_number: 15838864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 5 218 8 220 236 362 76.0 1e-100 MAIQRQKLELPSGHNKLLLHSCCAPCSGEVMESLIESNINFSIFFYNPNIHPVKEYLIRK EENIRFAEKHNIPFIDADYDTDNWFARAKGMENEPERGIRCTMCFDMRFERTALYAYEHG FSLISSSLGISRWKNMAQINDCGIRAASHYPDIQYWDYNWRKNGGSSRMIEISKREEFYQ QEYCGCVYSLRDTNRWRMSNGRDRIKIGVKFYSNAMEND Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:04:48 2011 Seq name: gi|333032545|gb|GL891881.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld135, whole genome shotgun sequence Length of sequence - 538 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 537 654 ## AB57_2698 hypothetical protein Predicted protein(s) >gi|333032545|gb|GL891881.1| GENE 1 3 - 537 654 178 aa, chain - ## HITS:1 COG:no KEGG:AB57_2698 NR:ns ## KEGG: AB57_2698 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 178 50 227 255 275 100.0 6e-73 KTHREAKEAAEKALKAFEGIEDPAAAKKALQTIQNLDDKKLVDAGEVEKVKAEAIKAVEE KYAPIVAQRDALEASLHKELIGGGFARSKYIQDNIAVPVDMVQATFGHHFKIEEGKVVAY DPNGEKIYSRVRPGELANVDEALESLVGGYQHKDLILKGGKGTGGGFQGGGKGGAPTG Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:04:54 2011 Seq name: gi|333032544|gb|GL891882.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld136, whole genome shotgun sequence Length of sequence - 760 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + SSU_RRNA 1 - 760 100.0 # GQ078413 [D:1..1358] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:04:55 2011 Seq name: gi|333032543|gb|GL891883.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld137, whole genome shotgun sequence Length of sequence - 2019 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 150 86 ## ACICU_01064 hypothetical protein - Prom 260 - 319 80.3 - Term 205 - 271 30.0 2 2 Op 1 . - CDS 336 - 734 317 ## ACICU_01063 hypothetical protein - Prom 765 - 824 3.0 - Term 747 - 774 -0.8 3 2 Op 2 . - CDS 827 - 1261 308 ## ACICU_01061 hypothetical protein - Prom 1386 - 1445 7.8 - Term 1466 - 1499 3.1 4 3 Tu 1 . - CDS 1505 - 2014 410 ## ABSDF1804 putative bacteriophage protein Predicted protein(s) >gi|333032543|gb|GL891883.1| GENE 1 3 - 150 86 49 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01064 NR:ns ## KEGG: ACICU_01064 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 49 30 78 168 100 100.0 2e-20 MNTYRVVRNDDRGVYVQHKEGSGQVYYEFLPVSIQRSGMLGDLDQTLTV >gi|333032543|gb|GL891883.1| GENE 2 336 - 734 317 132 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01063 NR:ns ## KEGG: ACICU_01063 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 132 1 132 132 254 100.0 8e-67 MYKLKLNPQTSGYGVTPGDDVKRQQMDGGRGRYYIDVKRNSHIVDVNWNLSKTDFNKMMA FWRVYQNKPASFYADLVIDQGTRQQYLCNFIPNSFKTNEVNGNLYRVNAQLEVVQNQPNL NADIALIKDWEV >gi|333032543|gb|GL891883.1| GENE 3 827 - 1261 308 144 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01061 NR:ns ## KEGG: ACICU_01061 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 144 22 165 165 256 93.0 1e-67 MVQFYITYQNNEGEKISKNLITKQISNNLTKYGSMHEPKKLNMPKPTISLNNGEEFFEFK VPANKKLTFRLTSVIGSTTMYSCDVKMDYQLERNGNYELIRLKQIKDFVNPALLTEPSQD EAYCKFVVKEIFEDGKETIIKSIS >gi|333032543|gb|GL891883.1| GENE 4 1505 - 2014 410 169 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1804 NR:ns ## KEGG: ABSDF1804 # Name: not_defined # Def: putative bacteriophage protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 168 1276 1443 1443 302 95.0 3e-81 MRRAMMSSSAFIESQKQADIFNQPVQDTQIIYKGNRDTPKLASSGNLDLFHDGKVYFSSN GIVQDRSNLDDVQDFTLGSTSRPQAEMMPSIEPASPTINFKIEVINQVSGATVEAEQLDE QTVRIIVKDELDKQLPRTVPKLVSDQIANPNSTISRSLTENTTARRNRT Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:07 2011 Seq name: gi|333032542|gb|GL891884.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld146, whole genome shotgun sequence Length of sequence - 5230 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 5, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 157 - 216 9.5 1 1 Tu 1 . + CDS 242 - 700 398 ## ABBFA_002342 hypothetical protein + Term 755 - 782 -0.1 + Prom 856 - 915 7.8 2 2 Op 1 . + CDS 992 - 1336 357 ## ABBFA_002341 hypothetical protein + Prom 1344 - 1403 6.2 3 2 Op 2 . + CDS 1434 - 2540 672 ## ACICU_01216 phage putative head morphogenesis protein, SPP1 gp7 4 3 Tu 1 . - CDS 2535 - 3749 863 ## COG0477 Permeases of the major facilitator superfamily - Prom 3787 - 3846 6.8 + Prom 3766 - 3825 8.3 5 4 Tu 1 . + CDS 3861 - 4307 438 ## COG1733 Predicted transcriptional regulators + Prom 4318 - 4377 2.7 6 5 Op 1 . + CDS 4505 - 4723 238 ## ABBFA_002338 hypothetical protein 7 5 Op 2 . + CDS 4737 - 4883 129 ## ACICU_01220 hypothetical protein Predicted protein(s) >gi|333032542|gb|GL891884.1| GENE 1 242 - 700 398 152 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002342 NR:ns ## KEGG: ABBFA_002342 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 152 1 152 152 267 99.0 9e-71 MPKYLAIAEKVYKEIKKDNLFTEDTIQNLNCLISLIRKAIKGTEFKLKYNFINFEECLNQ FNKEKSVHIDLSLMPKFKNEDEFILWLAGFIERMTIGGKEKLPPISNYIPKGFKIDQAEI PVAAEPSKEENAEMIINYFKSEDFIKNNKISS >gi|333032542|gb|GL891884.1| GENE 2 992 - 1336 357 114 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002341 NR:ns ## KEGG: ABBFA_002341 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 114 1 114 114 185 100.0 4e-46 MNENAELIKYLDIAENVYENMYEKYQITDNPVTNLNRVMAEIRKEAEQNDLKLKYTKIDF EECLTKPLSEREIKVDLSLLPRFEYRDEFILWLTNFIRNISVQKKFVKQKYYFN >gi|333032542|gb|GL891884.1| GENE 3 1434 - 2540 672 368 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01216 NR:ns ## KEGG: ACICU_01216 # Name: not_defined # Def: phage putative head morphogenesis protein, SPP1 gp7 # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 368 1 368 368 728 100.0 0 MKNITEKSLFDVFTQHQAYLYRASSRSVNELYKFFNSETMVMLDRLSNLMKELNETEKFA LAGGEYTTQHLKNIQLVISNWFNSINTVLPEMFTHSATALAIYESNYMAKLFGKVIKDLE GEQLYQSIKRVPLAGGALVDESLAQISENALQRIEYAIRDGMNTGMTPQQIIKRITGTKR LKYEDGLLNSTKIDIERIIRTLRSHISNQVYLYNFKNFNFEYVRFVSVLDGRTSKICAAV DGSIWKLNDSAKRVPPLHPNCRSILVPVSKDGRLIGNRSFVMDERKVRDIPKDERTQLMG QIDANISFKEFFNLTDNFFQKEWLGPKRYKLYKEGQFDFDKFFDPKGRLYTLDELRELDE RTFKILGL >gi|333032542|gb|GL891884.1| GENE 4 2535 - 3749 863 404 aa, chain - ## HITS:1 COG:PA1352 KEGG:ns NR:ns ## COG: PA1352 COG0477 # Protein_GI_number: 15596549 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 24 401 11 388 403 271 59.0 1e-72 MKASLVSSKSSVDNNKTHSNLPRSVVLLFAIASGVSVANVYYAQPLLDILASDFNISHAA IGGVVTATQIGCALALVFLVPLGDLINRRRLMAIQLMALISALLMVAFAHSTIVLLTGML AVGLLGTAMTQGLIAYAASAAAPHEQGHVVGTAQSGVFIGLLLARVFSGGISDVAGWRGV YFCAAIIMLMIALPLWRRLPHLNVQPVTMRYPQLLASMLKLLRQEKVLQVRGVLALFMFA AFNIFWSALVLPLSAPPYNFSHTVIGSFGLFGVIGALAATRAGQWADRGYAQHTSLAALL ILLLAWWPLSLMTYSLWALVIGIVLLDLGGQALHVTNQSMIFRTRPEAHSRLVGLYMLFY AVGSGVGAISTTATYAYAGWLGVCSLGACVSLLALLFWWRTMKL >gi|333032542|gb|GL891884.1| GENE 5 3861 - 4307 438 148 aa, chain + ## HITS:1 COG:PA1607 KEGG:ns NR:ns ## COG: PA1607 COG1733 # Protein_GI_number: 15596804 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 146 1 145 146 148 50.0 4e-36 MPNSTLMKEEPCPVARCVNLIGDRWSLLIVRDAFDGMRRFGDFQRSLGVARNILSDRLKK LVEAGVLEMQDASDGTAYQEYVLTPKGESLFPVIVALRQWGEHNLFESGERHSLLIDKNT GQQIPFMAPVTADGKVLKASDTQVQKVK >gi|333032542|gb|GL891884.1| GENE 6 4505 - 4723 238 72 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002338 NR:ns ## KEGG: ABBFA_002338 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 72 38 109 109 120 100.0 2e-26 MDARQHEVPAKELHDIANHLEEQQAKQLYQELIKSAYSSKLFEDPLIKSKAVENFQTTWH EQCLAKELAKNM >gi|333032542|gb|GL891884.1| GENE 7 4737 - 4883 129 48 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01220 NR:ns ## KEGG: ACICU_01220 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 48 1 48 48 83 100.0 3e-15 MASLGWKIELYFLLTSSLTLAKRGKEGEKVLVRVLNIMQGQRYIEICE Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:22 2011 Seq name: gi|333032541|gb|GL891885.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld147, whole genome shotgun sequence Length of sequence - 1939 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 3 - 62 5.9 1 1 Op 1 . + CDS 87 - 1037 898 ## COG5527 Protein involved in initiation of plasmid replication 2 1 Op 2 . + CDS 1030 - 1605 391 ## p2ABAYE0002 hypothetical protein 3 1 Op 3 . + CDS 1625 - 1768 78 ## p2ABAYE0003 hypothetical protein Predicted protein(s) >gi|333032541|gb|GL891885.1| GENE 1 87 - 1037 898 316 aa, chain + ## HITS:1 COG:NMB0495 KEGG:ns NR:ns ## COG: NMB0495 COG5527 # Protein_GI_number: 15676404 # Func_class: L Replication, recombination and repair # Function: Protein involved in initiation of plasmid replication # Organism: Neisseria meningitidis MC58 # 54 252 14 209 327 211 51.0 1e-54 MRELVVKDNALINASYNLDLVEQRLILLAIVEARESGKGINANDPLEVHAEGYINQFGVH RNTAYQALKDACNDLFARQFSYQKINERGNIENYRSRWVSEIGYVDNEAVVKLIFAPAIV PLITRLEEHFTKYELQQVSNLSSAYAVRLYELLIAWRSTGSTPVIELSDFRQRIGVLDTE YKRMERFKTSVLELAIKQINEHTDITVKYEQHKRGRSISGFSFTFKQKKKDNPPIERDPN TLDLFTKMTDAQRHMFANKLSELPEMGRYSQGTESYPQFAVRIAEMLQDPDRIKELYPYL KKVGYMPSNKKDTVNG >gi|333032541|gb|GL891885.1| GENE 2 1030 - 1605 391 191 aa, chain + ## HITS:1 COG:no KEGG:p2ABAYE0002 NR:ns ## KEGG: p2ABAYE0002 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 191 1 191 191 313 99.0 2e-84 MAKLSLSEVSKKFHVDRSTIYRAVRNGRLSRSSDGQFDLAEVIRCFGEPEQTSQKIESSR QEGDESTKKLIAHLENEVKKYQEREERLMQQIDRMQTLIELKSVAPATAAPHQDATACDT KMPQHATTQQDTDNKKNNELNIAENVAVPQQETTAYHTQTLQHATLQSVAVPQHKKRGLF GRVLNAVFDND >gi|333032541|gb|GL891885.1| GENE 3 1625 - 1768 78 47 aa, chain + ## HITS:1 COG:no KEGG:p2ABAYE0003 NR:ns ## KEGG: p2ABAYE0003 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 47 1 47 47 66 100.0 4e-10 MPKLKDIALGIIVAPLLIPIMLIASYQDKKALKKELDECQKEKDQAS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:27 2011 Seq name: gi|333032540|gb|GL891886.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld148, whole genome shotgun sequence Length of sequence - 850 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 22 - 300 195 ## ACICU_01017 hypothetical protein 2 1 Op 2 . + CDS 303 - 849 340 ## ACICU_01018 hypothetical protein Predicted protein(s) >gi|333032540|gb|GL891886.1| GENE 1 22 - 300 195 92 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01017 NR:ns ## KEGG: ACICU_01017 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 92 202 293 293 173 100.0 2e-42 MRISIKKPLSENAVKLILKKLISFGPLANQSLENSIIGNYQGVFEPRQNQIQENPQSHNV PEEPGYFTQMYAESNRSNVIDVTPVSQDFGGY >gi|333032540|gb|GL891886.1| GENE 2 303 - 849 340 182 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01018 NR:ns ## KEGG: ACICU_01018 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 182 1 182 266 345 100.0 7e-94 MNELAPFESFLKELIAAYRTKYAVQFNKNFPVEGKNAVPMQIVEQQLAKALVGVTPNQLQ RGLALFYASTNTYMPNFAEFRAMCMGDDWWSAEKAWVKACEYTQISQHKKVTLPDGREQN QEITTLTKFVLDQVYLLIQDGEMYKAKMEFIKIYDEYKAEAQLKGKTQAWYQEPILLAQK NE Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:33 2011 Seq name: gi|333032539|gb|GL891887.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld155, whole genome shotgun sequence Length of sequence - 1087 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 8 - 1018 241 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase Predicted protein(s) >gi|333032539|gb|GL891887.1| GENE 1 8 - 1018 241 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 5 317 11 312 317 97 28 4e-21 MSYHHLNFEDRTALMLESRKEGFSARKFAELIKRHPSTIYRELKRNSINDVYQAQYASDN TFARRRRGHRKLKIDSILWKFIVEAIRCLWSPQQIAKRLKTFPDLDQTMNVSHTTIYSTI RALPKGELKKDLLSCLRHENKKRKANGEPKKDSILQDIKTIHERPAEVQERKIPGHWEAD LIKGKDNKSSIATLIERNTRLCILATLPDAKAESVRKALTEALKYLPAELRKTLTYDRGR EMSEHKILEEDLGIDVYFCDPHSPWQKGTCENMNGLIRQYLPKGIDLNQADQHYLNQVAM SLNTRPRKALDWLTPLEKFAQLVDYHMAFETVAPHV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:34 2011 Seq name: gi|333032538|gb|GL891888.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld162, whole genome shotgun sequence Length of sequence - 761 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 761 313 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 Predicted protein(s) >gi|333032538|gb|GL891888.1| GENE 1 3 - 761 313 253 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 253 56 303 306 125 31 1e-29 QGPKFAAEMEAHVREYDVDIMNLQRVSKITGADQTANGLVEVELENGAKLESKTVILSTG ARWREMNVPGEAEYRTRGVAYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTL VEFDTKLRADQVLQNKLNSLPNTTVIMNALSTEVLGDGSQVTGLKYKDRTTDEEHVVELA GIFVQIGLLPNTDFLKDSEVELTNRGEIIVNDRNETNVKGVFAAGDCTTVPYKQIIIATG EGAKASLSAFDYI Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:37 2011 Seq name: gi|333032537|gb|GL891889.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld164, whole genome shotgun sequence Length of sequence - 10269 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 255 - 314 10.4 1 1 Tu 1 . + CDS 495 - 1562 1304 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D + Term 1572 - 1609 7.1 + Prom 1578 - 1637 6.6 2 2 Op 1 . + CDS 1777 - 5340 3659 ## COG0587 DNA polymerase III, alpha subunit 3 2 Op 2 2/0.000 + CDS 5355 - 6194 900 ## COG0565 rRNA methylase 4 2 Op 3 . + CDS 6187 - 7002 1041 ## COG1045 Serine acetyltransferase + Term 7045 - 7074 -0.2 + Prom 7011 - 7070 5.2 5 3 Op 1 . + CDS 7106 - 8047 1100 ## ACICU_01500 hypothetical protein + Term 8059 - 8104 1.4 + Prom 8079 - 8138 8.5 6 3 Op 2 . + CDS 8164 - 10170 1804 ## ABAYE2193 hypothetical protein + Term 10175 - 10221 12.3 Predicted protein(s) >gi|333032537|gb|GL891889.1| GENE 1 495 - 1562 1304 355 aa, chain + ## HITS:1 COG:PA1337 KEGG:ns NR:ns ## COG: PA1337 COG0252 # Protein_GI_number: 15596534 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Pseudomonas aeruginosa # 21 355 30 362 362 365 63.0 1e-101 MLTKTVKSFGLAMGLLACSLPLYAKNNVVVVATGGTIAGAGASSANSATYTAAKVPVDAL INAVPQIQDLANVSGIQALQVASESITDKELLQIARQVNELVKKPTVNGVVITHGTDTLE ETAFFLNLVVHTDKPIVLVGSMRPSTALSADGPLNLYSAVALAASDDAKNKGVMVLMNDS IFAARDVTKGINIHTNAFVSQWGALGTLVEGKPYWFRQSVKRHTNASEFNIENIKGDALP TVQIVYGSDSMLPDAYEAYAKAGAKAIIHAGTGNGSVAKYIVPTLQNLHDKNGIQIIRSS RVPQGFVLRDAEQPDSKYGWVAAHDLNPQKARILAALALTKTNDAKEIQRMFWQY >gi|333032537|gb|GL891889.1| GENE 2 1777 - 5340 3659 1187 aa, chain + ## HITS:1 COG:PA3640 KEGG:ns NR:ns ## COG: PA3640 COG0587 # Protein_GI_number: 15598836 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Pseudomonas aeruginosa # 1 1146 3 1173 1173 1182 52.0 0 MQFVHLGIYTEFSITESIVRIPDLVKTAVKDEMPALALTDLSNLHAAVKFYNSCLKKGIK PILGSTIRLNDAQHRATLLAMSDIGWKGLTEIVSRGFIEGQQLSIPCVQKEWVLEQHQDI IVLLGQHSDVGQMLCSSNPQKAEPLLEEWIEKFGNRVYLALTRTDRPGEEDFIQEAAKLA AKYNVGVVAHNDVHFIEKEDFEAHEARVCIADGYVLADDRRPRLYSPEQYFKTSDEMIEL FSDIPSAIENTYQIAKRCNVTLKLGTYFLPEYPIPDGFTIDTYFEHLSKEGLEERLNYLY PVEKRGEDWPEIRKPYDERIDYEVGIILKMGFPGYFLIVMDFIQWAKNNGVPVGPGRGSG AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVSRTYGRE AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKMVPTKPLGVDLATAIEMEPQLKDI VTNPSNPDNDDASEIWEMALKLEGITRNTGKHAGGVVIAPGKITDFSAVLCDADGTNRVA QYDKDDVEAAGLVKFDFLGLRNLTVIEDAIQNINKNRDSNDPLNISHVPLDDPKAYSVFA DANTTAVFQFESVGMKRMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL HPLLEGVLEPTYGIMVYQEQVMQTAQICAGYTLGGADLLRRAMGKKKPEEMVKQRQIFLE GAGQKGIDESTANHIFDYMEKFAGYGFNKSHAAAYALVAYHTAWLKAHYPAEFMAAVMSS EMQNTDSVVFLIDDCRNNGLEVLPPSVNMSTYHFHASDDKTIVYGLGAIKGVGEQAMQSV IDSRRQQGPYTDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERSSLMAQLPEAVQAA EQARSNRESGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRQE LKAFIPAKLNEITATRRGVTTVYAGLVLDVANFPNRVVIVLDDGTARIEVSCNHERFQRF KDIIQVERVVVFEGEIYEREGFDRPMGRLNKAFSLNEIRQKRANSIQIKLTHDLLQPSLA KDLQNILLPYCNVDMHQHIAIQLQIDQPYAQAELQLGPQWKVAPLDELLAKLRDYFGKDN IHIEYQVKSKAAKAAEPVRPQPVASPPVDMTIDDALDSYQSEVSQYS >gi|333032537|gb|GL891889.1| GENE 3 5355 - 6194 900 279 aa, chain + ## HITS:1 COG:PA3817 KEGG:ns NR:ns ## COG: PA3817 COG0565 # Protein_GI_number: 15599012 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylase # Organism: Pseudomonas aeruginosa # 13 272 2 257 257 230 46.0 2e-60 MSLFDDTAVSKQLAQVRIVMVNTTLPANIGSALRAMKTMGLSKLVLVSPKTYPHPDIQAL AAGAQDLLEQVEIVETLEEAIKDCHLVFGTSARSRTIPWPLLDVRPASKEAIKAAAQGQQ IAIVFGREDRGLTNEELALANYHLTIPVNSDYGVLNVAQAIQVVCYELRMSVLEQKEVAS DAGQMPLAQGQSMQWDEPLVTQQQMEEFYPHLEKMLTEIEFLDPENPRLLPLRLRRLFGR IQLDRMEYHLLRGIFSRVQALTSGKWKKASSDKEDQPNA >gi|333032537|gb|GL891889.1| GENE 4 6187 - 7002 1041 271 aa, chain + ## HITS:1 COG:PA3816 KEGG:ns NR:ns ## COG: PA3816 COG1045 # Protein_GI_number: 15599011 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Pseudomonas aeruginosa # 1 233 1 229 258 300 62.0 3e-81 MLKQLKEDIQAVFARDPAARNTLEVLTTYPGIHALLLHRLAHELWKKDCKGTARFVSSFS RFATGIEIHPGAKIGKRFFIDHGMGVVIGETAEIGDDVTLYHGVTLGGTTWNKGKRHPTL EDGVVVGAGAKILGPFTVGKGAKVGSNAVVTKAVPAGVTAVGNPARYIYKDADKTKDKDE ERRRDYAQSIGFAPYATTADQSDPILEGMRVLLDRIQHNETRMNNLCQRLSELDPTFKKE SQDEQPFSDEELKILEEVRRECGAQNKTSKT >gi|333032537|gb|GL891889.1| GENE 5 7106 - 8047 1100 313 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01500 NR:ns ## KEGG: ACICU_01500 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 313 1 313 313 590 100.0 1e-167 MNFKPLAYILLATSSLTACTMAPVKEQKIEPFVFKEPELTPPFYALNPFNYDAPPAFEVA LKEAAAQPVTKMVVTRQDDPTKTLTLDTNKLIVPTVNNSQRSMKYAVLAGNNEIDVTEID DFLQLVEGKARHYPPRFTDRQERKGFESKLKEVTQRLDTLAANPDASFDILIRAFKASVL ARNLDLGTAHTTKSLEYAQRLLKINPDDAEANFWFGFGLSEGGGQREAIPYLDKAIKGNV QEAYLAAANNYIAMEQKKNAIQTLKNYKVKYPDEAEVADRLIQEIEKQGRWNVWQVLTNP AMSSATPSAATKK >gi|333032537|gb|GL891889.1| GENE 6 8164 - 10170 1804 668 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2193 NR:ns ## KEGG: ABAYE2193 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 668 4 671 671 1347 100.0 0 MFVRKRNSALFTVILLGSILSGCQVVNVKQQALNVTIANERNSILTQDKLSEASLNVLSM SGQEAKACTDSPDTCVNQLKNLPQILDEQLLSAASEMYLAKAMALSDSSECKISRFTKHK PTEEQKVIQNKYDECLDQQLSLLDKSIRYSYAYLFSTKRQPTDRIFDNRQVQIRDFYNQA IAKMVSVYDLRYPQKNVVEPQIHIGKSVYSIDFEFHRQLSGQKLEKLISSYNLNFSGLRT INRRDGFGSEFVAVFPSSGKEDINEYILDPLNYSYKNGVNPNIHHARYLAATIVAEPKHA KTIQEIINDPEFVIRVYDPYRTDNINVAGKQYPLAANFSAPYGLWLAENNLGVAAYLSLI DRDQHLTMPHLYMLEPYNPNKKIIVLVHGLASSPEAWIALTNDVMGDTVLRDNYQVWQVF YSTNMPILESRFQIYALLKQAFGSLNPSDPAAHDAVLVGHSMGGIISRLLVSDADITKPA LEMMTIRQQNRFKKHPMVTERLQMHSISNFDRAIFLASPHRGTDYADRWFTLAARKIIRL PGAFLSAVATSLTTENLDIKDFLNNIDNGLIQNGPSDLSHQSKFMELTENINPHQGLIFH SIMGNITKSDDPNVITDGIVPYKSAHLEGAKSEKVLPGGHSIQLTPQAVLELRRILREHL VEHGLYKP Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:51 2011 Seq name: gi|333032536|gb|GL891890.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld171, whole genome shotgun sequence Length of sequence - 1407 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 35 - 388 291 ## ACICU_01050 hypothetical protein - Prom 422 - 481 1.8 - Term 434 - 470 -0.3 2 1 Op 2 . - CDS 485 - 1006 287 ## ABBFA_002554 hypothetical protein - Prom 1028 - 1087 4.0 3 2 Tu 1 . - CDS 1115 - 1333 210 ## ACICU_01049 hypothetical protein Predicted protein(s) >gi|333032536|gb|GL891890.1| GENE 1 35 - 388 291 117 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01050 NR:ns ## KEGG: ACICU_01050 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 117 1 117 117 201 90.0 5e-51 MSNFVFKRGDTFNLNLQLVDMDEALQYPPDDVRRAIDLTGYTFTSQVKALADGATVATLT CTALSQSTQKGWLNIKSSASTATWPLGLCQMDIKAVVSGTTQHTETLTFQVIDGVTA >gi|333032536|gb|GL891890.1| GENE 2 485 - 1006 287 173 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002554 NR:ns ## KEGG: ABBFA_002554 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 48 172 39 183 183 82 31.0 1e-14 MKKSTLGWGAAGLVALGIFGSGNDNSPKQTSDSENAQSAVEEVIESKYINTNSLNIRDKP NGQVVGKLGRGEKVDIYEMKGNWARISLNSSSPQWLSTKLLCETDGCFKQKSRSTTSNNY QALKSHPHHSERKQKKTYYDSDCSCAVVDYCVGPRGGHYCITSGGNKRYKPRY >gi|333032536|gb|GL891890.1| GENE 3 1115 - 1333 210 72 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01049 NR:ns ## KEGG: ACICU_01049 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 69 1 69 72 120 100.0 2e-26 MSCMLTLEEIEIKRQELERHLEDVMSVELSKWQSENKLCVSDVNIRLANVVSLGGPKHNV VTGVSVDLDNEL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:05:59 2011 Seq name: gi|333032535|gb|GL891891.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld172, whole genome shotgun sequence Length of sequence - 1395 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 49 - 372 177 ## ABAYE2751 hypothetical protein - Prom 403 - 462 80.4 2 2 Op 1 . - CDS 578 - 754 141 ## ACICU_01005 hypothetical protein 3 2 Op 2 . - CDS 754 - 1194 250 ## ABBFA_002567 hypothetical protein - Prom 1264 - 1323 7.5 Predicted protein(s) >gi|333032535|gb|GL891891.1| GENE 1 49 - 372 177 107 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2751 NR:ns ## KEGG: ABAYE2751 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 107 2 108 108 195 96.0 6e-49 MSNFKKHPDGYMSFLGRDDKGLYSVRIGWQVYASNANGSVLYKVKDGVKTPLNVFRFQTS YPKVWNELTQEIDFQRRKQLAIKLRETNIPTYDRKAYKQKRGFTGSR >gi|333032535|gb|GL891891.1| GENE 2 578 - 754 141 58 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01005 NR:ns ## KEGG: ACICU_01005 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 57 1 57 96 102 96.0 5e-21 MKDYNCPTCKKMIPVDRSKIKAGDEVSFCRVTQSSKSARFSSREGIVNCREGDVVLVS >gi|333032535|gb|GL891891.1| GENE 3 754 - 1194 250 146 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002567 NR:ns ## KEGG: ABBFA_002567 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 146 1 146 146 239 89.0 3e-62 MNVKTFSNKHKVTGVTAIAVLVALSSCEYRTANSSVPSNYSYESEQVVASEYELLAVKKT GEKSGEAVIRIDGFKLNVSFDFDGVADSYGVAGSDFTTAEITNLAIDSVTDLSGKSFNDF TNHDDHKNINILLAGYIDRNNWLEAA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:06:06 2011 Seq name: gi|333032534|gb|GL891892.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld181, whole genome shotgun sequence Length of sequence - 1105 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 148 - 510 150 ## ACICU_01065 hypothetical protein 2 1 Op 2 . + CDS 503 - 1103 549 ## ACICU_01066 hypothetical protein Predicted protein(s) >gi|333032534|gb|GL891892.1| GENE 1 148 - 510 150 120 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01065 NR:ns ## KEGG: ACICU_01065 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 120 1 120 120 238 100.0 4e-62 MKSHDHLLDRQYDEDHYNCVHFVHEAAMDLYGIDRAEALELFMQPKGKITFLSSRLKLLN PLPMPKEGCIVAFHPRQRNKPPHVGLFRGQKILHLMESGVTYLPEEVVMEMGFNRVSYYD >gi|333032534|gb|GL891892.1| GENE 2 503 - 1103 549 200 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01066 NR:ns ## KEGG: ACICU_01066 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 200 1 200 1141 384 100.0 1e-105 MIKVIYKKDALSEEKTIEQAQTIGQWLTSKYEHMPEHVRIFHTTSNMDHAEISFANEVTP KNAYDLKQLDFLPGTFIVVENPKWVAAIVSIVISIAIAFLMPTPSIAQTTQNTNQSSSAN NELSNRENKIRVNGRIADNYGAGWNTPDLIAVPYKVYENNVEVEHVVGCIGRGHYKINGA YDGETNIVDIAGASVEVFRP Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:06:13 2011 Seq name: gi|333032533|gb|GL891893.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld182, whole genome shotgun sequence Length of sequence - 1203 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1191 1613 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|333032533|gb|GL891893.1| GENE 1 1 - 1191 1613 396 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 394 1 405 407 625 76 1e-180 MAKAKFERNKPHVNVGTIGHVDHGKTTLTAAIATICAKTYGGEAKDYSQIDSAPEEKARG ITINTSHVEYDSPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMPQTREHI LLSRQVGVPYIIVFLNKCDLVDDEELLELVEMEVRELLSTYDFPGDDTPVIRGSALAALN GEAGPYGEESVLALVAALDSYIPEPERAIDKAFLMPIEDVFSISGRGTVVTGRVEAGIIK VGEEVEIVGIKDTVKTTVTGVEMFRKLLDEGRAGENCGILLRGTKREEVQRGQVLAKPGT IKPHTKFDAEVYVLSKEEGGRHTPFLNGYRPQFYFRTTDVTGAIQLKEGVEMVMPGDNVE MSVELIHPIAMDPGLRFAIREGGRTVGAGVVAKVTA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:06:14 2011 Seq name: gi|333032532|gb|GL891894.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld184, whole genome shotgun sequence Length of sequence - 538 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 537 595 ## ACICU_02737 hypothetical protein Predicted protein(s) >gi|333032532|gb|GL891894.1| GENE 1 3 - 537 595 178 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02737 NR:ns ## KEGG: ACICU_02737 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 178 50 227 255 271 99.0 8e-72 KTHREAKEAAEKALKAFEGIEDPAAAKKALQTIQNLDDKKLVDAGEVEKVKAEAIKAVEE KYAPIVEQRDALEASLHKELIGGGFARSKYIQDNIAVPVDMVQATFGHHFKIEEGKVVAY DQNGEKIYSRVRPGELANVDEALESLVGGYQHKDLILKGGKGTGGGFQSGGKGGAPTG Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:06:18 2011 Seq name: gi|333032531|gb|GL891895.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld186, whole genome shotgun sequence Length of sequence - 808 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 408 199 ## ACICU_01019 hypothetical protein 2 1 Op 2 . - CDS 395 - 529 93 ## ABBFA_002559 hypothetical protein 3 1 Op 3 . - CDS 526 - 723 246 ## ABSDF1328 hypothetical protein Predicted protein(s) >gi|333032531|gb|GL891895.1| GENE 1 3 - 408 199 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01019 NR:ns ## KEGG: ACICU_01019 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 135 1 110 112 134 55.0 2e-30 MKATKLIRDKGLQYAKEIVDSAPDNATEWNEGYEFQCGQSVEISPADREKYFVDLVELKR LVESLKIINDLGGVEKLTPAFITTDKHVGYTHVRMVGNGRLSFLDDFCDFIPDGSISIKR VMTAIRDHESIYGGG >gi|333032531|gb|GL891895.1| GENE 2 395 - 529 93 44 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002559 NR:ns ## KEGG: ABBFA_002559 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 42 1 42 42 64 85.0 2e-09 MNKFEILAWGLLISFFTAAISGAVVWWWLARKELDEKGASHESN >gi|333032531|gb|GL891895.1| GENE 3 526 - 723 246 65 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1328 NR:ns ## KEGG: ABSDF1328 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 65 185 249 249 121 89.0 1e-26 MERLKINGRKPVPVQKLKAKEKEPELKQELGPDPFDNPHEYAEMCRREGMPIPRNILKLI DGANI Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:06:27 2011 Seq name: gi|333032530|gb|GL891896.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld188, whole genome shotgun sequence Length of sequence - 8343 bp Number of predicted genes - 17, with homology - 17 Number of transcription units - 8, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 86 - 283 198 ## ABSDF1328 hypothetical protein 2 1 Op 2 . + CDS 280 - 618 175 ## ACICU_01019 hypothetical protein 3 1 Op 3 . + CDS 611 - 1003 337 ## ACICU_01020 hypothetical protein 4 1 Op 4 . + CDS 1003 - 1404 205 ## ACICU_01021 hypothetical protein 5 1 Op 5 . + CDS 1401 - 1877 259 ## AB57_2712 hypothetical protein 6 1 Op 6 . + CDS 1849 - 2103 192 ## AB57_2711 hypothetical protein + Term 2170 - 2200 -1.0 + Prom 2270 - 2329 9.0 7 2 Tu 1 . + CDS 2349 - 2567 135 ## ACICU_01024 hypothetical protein + Term 2646 - 2683 5.5 + Prom 2613 - 2672 6.5 8 3 Tu 1 . + CDS 2781 - 3332 312 ## ACICU_01025 hypothetical protein + Term 3346 - 3400 6.2 - Term 3460 - 3491 1.0 9 4 Tu 1 . - CDS 3506 - 3739 159 ## AOLE_12435 hypothetical protein - Prom 3887 - 3946 9.7 + Prom 4203 - 4262 7.7 10 5 Tu 1 . + CDS 4382 - 4726 168 ## ACICU_01027 hypothetical protein + Prom 4765 - 4824 10.0 11 6 Tu 1 . + CDS 4935 - 5171 145 ## ACICU_01028 hypothetical protein + Prom 5490 - 5549 16.5 12 7 Op 1 . + CDS 5581 - 5739 80 ## ABSDF1016 hypothetical protein + Prom 5791 - 5850 3.9 13 7 Op 2 . + CDS 5955 - 6140 180 ## ABAYE2731 hypothetical protein 14 7 Op 3 . + CDS 6151 - 6690 614 ## ABAYE2730 hypothetical protein 15 7 Op 4 . + CDS 6659 - 6904 118 ## ABAYE2730 hypothetical protein + Term 6979 - 7012 2.0 + Prom 7412 - 7471 5.8 16 8 Op 1 . + CDS 7512 - 7967 441 ## AB57_2708 hypothetical protein + Term 7994 - 8019 -0.5 17 8 Op 2 . + CDS 8029 - 8214 201 ## ACICU_01029 hypothetical protein + Term 8241 - 8266 -0.5 Predicted protein(s) >gi|333032530|gb|GL891896.1| GENE 1 86 - 283 198 65 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1328 NR:ns ## KEGG: ABSDF1328 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 65 185 249 249 125 98.0 5e-28 MERLKINGRKPAPVQKLQAKEKEPELAKELGPDPFDNPYEYAEMCRREGMPIPRNILQLI EGANV >gi|333032530|gb|GL891896.1| GENE 2 280 - 618 175 112 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01019 NR:ns ## KEGG: ACICU_01019 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 112 1 112 112 213 100.0 2e-54 MKASKLIRDKGLQYAKEIVDSAPSNATEWNEGFEFQCGQSVEISKADREKYFVDLSELKR LVESVDLVESWGGIDDVKLYDLSHCKNRPESAGYKLLQAIADYESIYGGGYV >gi|333032530|gb|GL891896.1| GENE 3 611 - 1003 337 130 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01020 NR:ns ## KEGG: ACICU_01020 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 130 1 130 130 249 100.0 2e-65 MFEQILKRRPKGATHWQAGYYYNSDECGIWSIWENGKWHGDFKFPDGVMTKLPEEKEPVM SEFEGKSGKWAWEIQKEQQANLVELRSSIENLVQKYKHDAHASSLFGDQDKARVYNCFAN QLKNLLKGGA >gi|333032530|gb|GL891896.1| GENE 4 1003 - 1404 205 133 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01021 NR:ns ## KEGG: ACICU_01021 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 133 1 133 133 246 100.0 2e-64 MSSVSIAEYRKLFPIKKNKKRRSAKQVARQPSVGEMVLATHLRACKIGFEQEYKFHPKRK WRADFLIIGTKILIEVEGGIWSGGRHTRGKGYIGDMEKYNSAAMMGFTVLRFSTEQVKAG VAIKQIEQLVGEK >gi|333032530|gb|GL891896.1| GENE 5 1401 - 1877 259 158 aa, chain + ## HITS:1 COG:no KEGG:AB57_2712 NR:ns ## KEGG: AB57_2712 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 158 1 158 158 314 100.0 6e-85 MSAVLKTQQMDWSKYTIDGWLEQFGAWCETVRMKGGDLPDGLHINQIYWLMREAGKEVQK SKSYIRCEISDYEADQIQALLRSLLNSDKTDFTTKFALICLIKNKVENKGLLKVAQETNQ SKAQVAIMVSCARFYLLGHDKRLRQNGGSNENIHCKTI >gi|333032530|gb|GL891896.1| GENE 6 1849 - 2103 192 84 aa, chain + ## HITS:1 COG:no KEGG:AB57_2711 NR:ns ## KEGG: AB57_2711 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 84 1 84 84 138 100.0 8e-32 MKTYTVKLYEGVSREKVNETLKYYPDYFGKISIITNVINNKLQLTLKAFEGIDVITANDL MIKIVERLKASQLVEKHNLDLLTV >gi|333032530|gb|GL891896.1| GENE 7 2349 - 2567 135 72 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01024 NR:ns ## KEGG: ACICU_01024 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 72 1 72 72 148 100.0 6e-35 MNICVGGELDGQVIEKEGRLLKASDIDPSFKTEYYKQVFNRDNINYHFWLPIGSNLHEMS KRVLDILRASKN >gi|333032530|gb|GL891896.1| GENE 8 2781 - 3332 312 183 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01025 NR:ns ## KEGG: ACICU_01025 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 183 1 183 183 358 100.0 8e-98 MKNYLIGLVITLGISGCVSIPSIDFSQQKVERFNPVKNWISVDTAPVKDMPNGKEIFKLK GGSEVYVFWYQDEWALLNPNMDRQQWIDTKYLCSFAGCYTPPVTYRYSKGSFDNRQPVYS TPQRESKGYNNTRTRSSATTRTPRSYSKTTNNSCYCTSGTYCVGPRGGHYCLNSTGSKRY LPR >gi|333032530|gb|GL891896.1| GENE 9 3506 - 3739 159 77 aa, chain - ## HITS:1 COG:no KEGG:AOLE_12435 NR:ns ## KEGG: AOLE_12435 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 77 1 77 77 116 87.0 3e-25 MEHQTLLDELNSQIEYYSKRTDCPPTRIRIGYKTYYELMQNPKFADEVSNSALDPNKRKY KKLKIKVTKDDNQLELE >gi|333032530|gb|GL891896.1| GENE 10 4382 - 4726 168 114 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01027 NR:ns ## KEGG: ACICU_01027 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 114 1 114 114 198 100.0 5e-50 MNKNVELINYIDVAETVYERVYENNKISNNLIVNLNRIMAEIKNQAAEKRLKLKYSSIDF EHCLSLPLADRKIKVDLSLIPHFEDREESILWLTNFIGKICEPRKMQRQKKKLH >gi|333032530|gb|GL891896.1| GENE 11 4935 - 5171 145 78 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01028 NR:ns ## KEGG: ACICU_01028 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 78 1 78 78 126 100.0 3e-28 MTIITLLDVETKKKVIVRSVIDPIARIDKKGNIQIIQIHKWLDDESGDFVDEDLYEALNN GEVGIYLTLQYMIIDIEN >gi|333032530|gb|GL891896.1| GENE 12 5581 - 5739 80 52 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1016 NR:ns ## KEGG: ABSDF1016 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 52 75 126 126 82 80.0 4e-15 MEELQKRLDGALKETQYALQYVEEDMRGNHEFLQMAMIRTLKAIEQVLKGGA >gi|333032530|gb|GL891896.1| GENE 13 5955 - 6140 180 61 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2731 NR:ns ## KEGG: ABAYE2731 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 61 74 134 134 113 96.0 2e-24 MIEVEGGIWSGGRHTRGKGYLGDMEKYNSAAMMGFTVLRFSTEQVKSGMALKQIELLIKG K >gi|333032530|gb|GL891896.1| GENE 14 6151 - 6690 614 179 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2730 NR:ns ## KEGG: ABAYE2730 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 176 1 176 250 336 96.0 3e-91 MLVEKFDFIELLRLAIAQGKAEGKKISKDVVLGELALLSPAAKLWATVLIEKVDFERIAI ITPAQKQTETFYSKYDFNFQTERRIEDIPGKVEFVRGEIKSGNFFRARNKLAVEIHKEMV KKKFTPTNAQGDLTNLAKGMAEIILRGHVFVKAMCGVCQGLGKIETFGLNGFPNGGKVL >gi|333032530|gb|GL891896.1| GENE 15 6659 - 6904 118 81 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2730 NR:ns ## KEGG: ABAYE2730 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 2 81 171 250 250 149 91.0 5e-35 MAFQMGARFCEKCNGTGKRPYTLKEKMNIAGIDATKTAYIKSYQKFELFGESIVAEWENE IRTRISRSFRFELPDSQETYA >gi|333032530|gb|GL891896.1| GENE 16 7512 - 7967 441 151 aa, chain + ## HITS:1 COG:no KEGG:AB57_2708 NR:ns ## KEGG: AB57_2708 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 151 1 151 151 247 98.0 9e-65 MPQYLMFAENIYNKIKDEELFSHDCIENMNLLMTCIRREIEGTEFKLKYNFIDFVELFSK QLDECKVKIDVSLIPPHNSEGEYILWLAGLIEKITEGGPKPPPPIKKFIPEYMSLKFELD FLPLNEEKIQNEGKEITDYFNSKLYKATFKK >gi|333032530|gb|GL891896.1| GENE 17 8029 - 8214 201 61 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01029 NR:ns ## KEGG: ACICU_01029 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 21 61 111 151 151 79 100.0 6e-14 MDSTPPPGPKPPPPIKKFIPEYMSLKYELDFLPLNEEKIQTEGKEITDYFNSKLYKATFK K Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:07:07 2011 Seq name: gi|333032529|gb|GL891897.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld190, whole genome shotgun sequence Length of sequence - 2022 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1944 1857 ## COG3501 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|333032529|gb|GL891897.1| GENE 1 3 - 1944 1857 647 aa, chain - ## HITS:1 COG:RSp0518_1 KEGG:ns NR:ns ## COG: RSp0518_1 COG3501 # Protein_GI_number: 17548739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 19 593 19 586 586 296 33.0 9e-80 MFNNIFQILESFGFLSQHRSVYLQFSDASLNSQVFLQRIDGQHYLNQGMTAELICLSTNA HIPLKTFIGVQVAVDQVTDRGSFFRTTGIITGASQGQSDGALTLYKLAISDPTYLWHKRR NSRVFMNKSVKEISEILFQEWQGKSPLFASSLTLDLSGLKQTYDVRPFVMQLNESDYDFL TRLWRSEGISWLIDEAELTVASNMDNIQPQKLRLIDDNNQYQALTRRAIRYHRSSATEQF DSMTSLMADRSLQPTSIFVQRWQPDVLQQTDGAGSVQSKHQHSTNYDNQSLSLEEAWHFS PAWMQDLNGEDGATSASNQQLEKFNQNLSAYYDAQSKQFIAKTTVRDTQVGYWFELNEHP EIDQHESTDKEFLIIGKNYYNQNNLPKDLNQQIQTLVQQSDWQASNTDERQANQLILQRR YIPTTPAYNPQTHSPVAHPQRAKVVGPEGEEIYVDEWGRIKVRFLFTRSDDHSHDGGAGT NNNDTDSAWIDVLTPWAGEGYGARFLPRIGEIVVINFFNGDIDRPFVMGRVHEAQRHPTK FDNKGKLPDTKKLSGIRSKEVSGGGFGQLRFDDTPGQISTQLQSSHGASQLNLGKLSHPK DKAESEDRGEGFELRTDQWGALRAGQGLLVSTHKQDNAKGDHLDAEV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:07:09 2011 Seq name: gi|333032528|gb|GL891898.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld191, whole genome shotgun sequence Length of sequence - 5625 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 4, operones - 4 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 6 - 338 154 ## AB57_3197 tail tape measure protein 2 1 Op 2 . + CDS 335 - 532 220 ## ABAYE2698 bacteriophage protein + Term 608 - 649 1.1 + Prom 908 - 967 4.9 3 2 Op 1 . + CDS 1001 - 1732 531 ## ABAYE2697 hypothetical protein 4 2 Op 2 . + CDS 1722 - 2366 305 ## ABAYE2696 hypothetical protein 5 2 Op 3 . + CDS 2393 - 3100 507 ## ABBFA_002528 hypothetical protein + Term 3195 - 3226 2.5 + Prom 3193 - 3252 8.1 6 3 Op 1 . + CDS 3310 - 3555 125 ## ABSDF1804 putative bacteriophage protein + Term 3563 - 3592 1.4 7 3 Op 2 . + CDS 3630 - 4382 352 ## gi|260554405|ref|ZP_05826626.1| predicted protein 8 3 Op 3 . + CDS 4386 - 4778 58 ## gi|260554406|ref|ZP_05826627.1| predicted protein + Term 4799 - 4830 1.5 9 4 Op 1 . + CDS 4843 - 5160 216 ## ABAYE2694 bacteriophage protein 10 4 Op 2 . + CDS 5162 - 5389 215 ## ABAYE2694 bacteriophage protein 11 4 Op 3 . + CDS 5389 - 5623 117 ## ABAYE2693 bacteriophage protein Predicted protein(s) >gi|333032528|gb|GL891898.1| GENE 1 6 - 338 154 110 aa, chain + ## HITS:1 COG:no KEGG:AB57_3197 NR:ns ## KEGG: AB57_3197 # Name: not_defined # Def: tail tape measure protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 103 1385 1487 1552 201 100.0 9e-51 MRRAMMSSNAFIESQKQSDIFNQPVQDTQIIYKGNRSVPITSSSASSDLFHDGKVYFSSN GFVQDRSNLEDVQDFTMGQAARPQAEIMPSIEPASPTINFKIEPPPPKLK >gi|333032528|gb|GL891898.1| GENE 2 335 - 532 220 65 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2698 NR:ns ## KEGG: ABAYE2698 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 65 1371 1435 1435 115 96.0 7e-25 MINQVSGATVEAEQLDEQTVRIIVKDELDKQLPRTVPKLVSDQIGNPNSTISRSLTENTT VRRNR >gi|333032528|gb|GL891898.1| GENE 3 1001 - 1732 531 243 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2697 NR:ns ## KEGG: ABAYE2697 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 243 1 243 243 418 100.0 1e-115 MTEFKWQIDSIRTVLFFNGEINFKKKEWSKNITGLEISNEMTQSEENGRLIQYVEITNLD SNKQFNLVYLKDQSLIDLQLVFERDENFYTFNEIIKEVDFFYEKISVFFDQLNEKIIRIG NVVELSIPVDNEKIGCDLLRSNVSYLNNMQEDLEEISYRTNKSYFIDNIKINQVVQYSNG QKMSLVIDPNIGIPKAKVQKNILMNIDVNTDASHRSELDFLKFIPLLQDSVKKLIRNGGT YVS >gi|333032528|gb|GL891898.1| GENE 4 1722 - 2366 305 214 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2696 NR:ns ## KEGG: ABAYE2696 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 214 5 218 218 368 100.0 1e-100 MLVDTYSSSLSLPSFSSNTLNSINRSTTVVSNYNGVANRVNKSVENFIDHTESMRVFFKS FLNNQSDFLAFFLCLCVIGSFQSYDLRLDSKDNIISPEIFKDSKNSFWWDKKHYFEIYKL EATNRGREASAYMTVLMHQAVQVEDLKFLNNFFQELNKSSLTSWSLIALLRSTNVYKNQI SLWKEMYLYTQNVVINEGLNPKREMYGLDRGLNI >gi|333032528|gb|GL891898.1| GENE 5 2393 - 3100 507 235 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002528 NR:ns ## KEGG: ABBFA_002528 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 235 1 235 235 495 100.0 1e-139 MNAKFQLIKDINYKPKDSQLGVIIKKVTSEQNHTGFVFIEDNKLVLAHFGWHETYFFQRR NDSDGYAMYWFDLEKIPERTLVHIINELEQISHNKDLNNNEVFYFPAPYGIVNFGGSRIS GGDFLSTPNTVGDSLTCSVFVNCIFEQSGFPILDLDTWKTTEQDIEWQTSILDKLIGKLS PEFMRIQRENVGKVPRLRPEQMVGACCVFDYELVDFDTADSAAIIVLEQLEALGC >gi|333032528|gb|GL891898.1| GENE 6 3310 - 3555 125 81 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1804 NR:ns ## KEGG: ABSDF1804 # Name: not_defined # Def: putative bacteriophage protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 81 1363 1443 1443 137 91.0 1e-31 MPSIEQSSPTINFKIEVVNQVSGATVEAEQLDEKTVRIIVTDELDKQLPRKVPKLVSDQI ANPNSTISRSLTENTTARRNR >gi|333032528|gb|GL891898.1| GENE 7 3630 - 4382 352 250 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260554405|ref|ZP_05826626.1| ## NR: gi|260554405|ref|ZP_05826626.1| predicted protein [Acinetobacter baumannii ATCC 19606] conserved domain protein [Acinetobacter baumannii 6014059] predicted protein [Acinetobacter baumannii ATCC 19606] Hypothetical protein ABK1_1560 [Acinetobacter baumannii 1656-2] conserved domain protein [Acinetobacter baumannii 6014059] # 1 250 1 250 250 450 100.0 1e-125 MLPPVPKTKSSEVTDIINSAVLTGSISEFQYFRCKRLLNDIKETEPLDWFLLSNSIIEMY FDNPILAHQYAREVLKISNSVSILSNLYFVFLSSVDFSSANENIDKIISLCSKQNLPLES FIPIDFKPITYFLDGILNDDLNYYKRFKKEDFNEFIQFFEIKNKLEIDSRVLKHIGSILF KCFNSRNVRCRKYEYSFIDDEFLILLYVDRSFDEIDAMNSEIFSKCYDEGLIDELNKLSY FIIPYEVGVD >gi|333032528|gb|GL891898.1| GENE 8 4386 - 4778 58 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|260554406|ref|ZP_05826627.1| ## NR: gi|260554406|ref|ZP_05826627.1| predicted protein [Acinetobacter baumannii ATCC 19606] conserved domain protein [Acinetobacter baumannii 6014059] predicted protein [Acinetobacter baumannii ATCC 19606] conserved domain protein [Acinetobacter baumannii 6014059] # 1 130 1 130 130 237 100.0 2e-61 MATTDTLNYCYELLGNSTKYDECHKRNIIGRAYYHAFYEVRHHLEQRLLWPVTKTKCGAH EKVYSRLSGYPAGSTSEMIQKRAAEIKNRIQKLKRFRTTADYHLHLTISNQLINYILHES SQISEEISRL >gi|333032528|gb|GL891898.1| GENE 9 4843 - 5160 216 105 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2694 NR:ns ## KEGG: ABAYE2694 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 99 1 99 132 199 100.0 2e-50 MYKLKLNPQTSGYGVTPGDDVKRQQMDGGRGRYYIDVKRNSHIVDVNWNLSKTDFNKMMA FWRVYQNKPASFYADLVIDQGARQQYLCNFIPNSFKTNEPPPRFQ >gi|333032528|gb|GL891898.1| GENE 10 5162 - 5389 215 75 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2694 NR:ns ## KEGG: ABAYE2694 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 75 58 132 132 142 96.0 3e-33 MMAFWRIYQNKPASFYADLVIDQGTRQQYQCNFIPNSFKTNEVNGNLYRVNAQLEVVQNQ PNLTADIALIKDWEV >gi|333032528|gb|GL891898.1| GENE 11 5389 - 5623 117 78 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2693 NR:ns ## KEGG: ABAYE2693 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 78 5 82 172 160 98.0 1e-38 MDNEYAKFFFNRKVDVYQLECIELSHPSFMNIYRIVRNDDRGVYVQHKEGSGQVYYEFLP ASIQRSGMLGDLDQTLTV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:07:52 2011 Seq name: gi|333032527|gb|GL891899.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld193, whole genome shotgun sequence Length of sequence - 1398 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 87 - 129 8.1 1 1 Tu 1 . - CDS 141 - 674 644 ## COG3539 P pilus assembly protein, pilin FimA - Prom 694 - 753 2.3 - Term 1051 - 1117 4.1 2 2 Tu 1 . - CDS 1163 - 1372 113 ## ACICU_01814 hypothetical protein Predicted protein(s) >gi|333032527|gb|GL891899.1| GENE 1 141 - 674 644 177 aa, chain - ## HITS:1 COG:XF0083 KEGG:ns NR:ns ## COG: XF0083 COG3539 # Protein_GI_number: 15836688 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: P pilus assembly protein, pilin FimA # Organism: Xylella fastidiosa 9a5c # 4 177 9 184 184 152 57.0 2e-37 MKKLALIAALSVVGIANAQAADGTITINGLVTDKTCDIVTPAGKDFTVTLPTVSKQTLAV AGDVAGRTPFQINLANCSQGKVATYFEPGATVDFNTGRLLNQDATGAKNVNVQLLGSNNN FIPVLAAGANGAQANSQWVDVAEGASADLNYYAEYYATGASTAGKVTTSVQYTIIYQ >gi|333032527|gb|GL891899.1| GENE 2 1163 - 1372 113 69 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01814 NR:ns ## KEGG: ACICU_01814 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 69 28 96 96 111 100.0 8e-24 MIKGNIVEDTCSTKSNEIECNAVNNLNIKLDSEYLNKDSLYKLAQHTEKMDTSIESLGSN RKIILINYH Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:08:33 2011 Seq name: gi|333032526|gb|GL891900.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld195, whole genome shotgun sequence Length of sequence - 146014 bp Number of predicted genes - 126, with homology - 124 Number of transcription units - 71, operones - 32 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 130 - 189 11.5 1 1 Tu 1 . + CDS 288 - 1196 509 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 1204 - 1243 8.0 - Term 1163 - 1204 0.7 2 2 Op 1 . - CDS 1242 - 1856 598 ## ACICU_02604 hypothetical protein - Term 1861 - 1904 2.4 3 2 Op 2 . - CDS 1933 - 3105 1129 ## ACICU_02605 hypothetical protein - Prom 3231 - 3290 3.0 - Term 3255 - 3302 7.0 4 3 Op 1 . - CDS 3310 - 3663 502 ## COG4766 Ethanolamine utilization protein 5 3 Op 2 7/0.087 - CDS 3677 - 4993 1456 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 6 3 Op 3 . - CDS 5011 - 6366 1487 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 7 3 Op 4 . - CDS 6395 - 7825 1622 ## COG1012 NAD-dependent aldehyde dehydrogenases 8 3 Op 5 . - CDS 7827 - 9017 1168 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - Prom 9091 - 9150 2.5 + Prom 9225 - 9284 4.0 9 4 Op 1 . + CDS 9338 - 11011 1368 ## COG1292 Choline-glycine betaine transporter + Term 11014 - 11067 1.5 + Prom 11124 - 11183 8.4 10 4 Op 2 . + CDS 11278 - 12942 1224 ## COG1292 Choline-glycine betaine transporter + Term 12971 - 13023 15.5 - Term 12964 - 13006 10.7 11 5 Tu 1 . - CDS 13111 - 14037 769 ## COG0583 Transcriptional regulator + Prom 14602 - 14661 4.5 12 6 Tu 1 . + CDS 14783 - 16186 1064 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 16215 - 16257 6.4 - Term 17023 - 17064 8.1 13 7 Op 1 2/0.130 - CDS 17093 - 18589 1492 ## COG1012 NAD-dependent aldehyde dehydrogenases 14 7 Op 2 3/0.130 - CDS 18646 - 18996 472 ## COG3450 Predicted enzyme of the cupin superfamily 15 7 Op 3 . - CDS 19015 - 20403 931 ## COG0665 Glycine/D-amino acid oxidases (deaminating) - Prom 20473 - 20532 4.4 + Prom 20447 - 20506 5.8 16 8 Tu 1 . + CDS 20535 - 21977 965 ## COG2508 Regulator of polyketide synthase expression + Term 22011 - 22048 0.2 17 9 Tu 1 . - CDS 22414 - 22968 375 ## ACICU_02619 TetR family transcriptional regulator - Prom 23001 - 23060 8.5 - Term 23611 - 23650 5.2 18 10 Tu 1 . - CDS 23702 - 24214 498 ## ACICU_02620 hypothetical protein - Prom 24255 - 24314 2.1 - Term 24278 - 24323 2.6 19 11 Tu 1 . - CDS 24349 - 25110 340 ## ACICU_02621 hypothetical protein - Prom 25195 - 25254 6.3 20 12 Op 1 . - CDS 25281 - 25421 83 ## 21 12 Op 2 . - CDS 25502 - 25981 253 ## ACICU_02623 hypothetical protein - Prom 26089 - 26148 8.1 - TRNA 26200 - 26276 82.3 # Val GAC 0 0 - Term 26374 - 26421 9.8 22 13 Op 1 9/0.043 - CDS 26445 - 26747 267 ## COG2879 Uncharacterized small protein 23 13 Op 2 . - CDS 26750 - 28846 2451 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 28951 - 29010 5.7 - Term 28952 - 28989 5.7 24 14 Tu 1 . - CDS 29013 - 29582 748 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 29649 - 29708 3.9 + Prom 29574 - 29633 3.9 25 15 Op 1 . + CDS 29656 - 30672 840 ## COG1509 Lysine 2,3-aminomutase 26 15 Op 2 . + CDS 30688 - 32433 1280 ## ABAYE1056 hypothetical protein 27 15 Op 3 . + CDS 32415 - 34538 1589 ## COG2202 FOG: PAS/PAC domain + Term 34558 - 34597 9.3 - Term 34546 - 34585 9.3 28 16 Op 1 . - CDS 34601 - 34825 395 ## PROTEIN SUPPORTED gi|126642459|ref|YP_001085443.1| 50S ribosomal protein L31 - Prom 34917 - 34976 1.7 29 16 Op 2 . - CDS 35019 - 35984 968 ## COG0385 Predicted Na+-dependent transporter - Prom 36063 - 36122 4.1 - Term 36069 - 36108 -0.9 30 17 Op 1 1/0.217 - CDS 36124 - 36525 249 ## PROTEIN SUPPORTED gi|15900839|ref|NP_345443.1| lactoylglutathione lyase 31 17 Op 2 . - CDS 36528 - 38699 2142 ## COG0477 Permeases of the major facilitator superfamily - Prom 38728 - 38787 6.2 + Prom 38702 - 38761 6.8 32 18 Tu 1 . + CDS 38884 - 41502 2608 ## COG1067 Predicted ATP-dependent protease + Term 41518 - 41549 3.4 - Term 41491 - 41550 14.3 33 19 Tu 1 . - CDS 41560 - 42489 1047 ## COG0583 Transcriptional regulator - Prom 42509 - 42568 4.6 34 20 Op 1 . - CDS 42591 - 43370 757 ## COG0739 Membrane proteins related to metalloendopeptidases - Prom 43431 - 43490 3.3 35 20 Op 2 . - CDS 43536 - 44303 824 ## COG0496 Predicted acid phosphatase - Prom 44354 - 44413 12.8 + Prom 44320 - 44379 5.9 36 21 Tu 1 . + CDS 44406 - 44777 375 ## ABBFA_001023 hypothetical protein + Prom 44837 - 44896 10.0 37 22 Op 1 . + CDS 44925 - 45347 551 ## ACICU_02641 hypothetical protein + Term 45388 - 45424 4.8 + Prom 45378 - 45437 3.2 38 22 Op 2 . + CDS 45474 - 46622 1218 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 46646 - 46694 8.6 + Prom 46636 - 46695 10.0 39 23 Tu 1 1/0.217 + CDS 46722 - 47267 629 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 47288 - 47327 3.1 + Prom 47306 - 47365 2.8 40 24 Op 1 6/0.087 + CDS 47387 - 47875 606 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 41 24 Op 2 4/0.130 + CDS 47880 - 49013 1280 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 42 24 Op 3 9/0.043 + CDS 49027 - 49761 710 ## COG2915 Uncharacterized protein involved in purine metabolism 43 24 Op 4 . + CDS 49816 - 51204 1740 ## COG0015 Adenylosuccinate lyase + Term 51223 - 51252 2.1 + Prom 51206 - 51265 3.5 44 24 Op 5 . + CDS 51287 - 51928 537 ## COG3647 Predicted membrane protein + Term 51932 - 51972 7.5 - Term 51918 - 51961 8.1 45 25 Tu 1 . - CDS 51978 - 54164 2247 ## COG1404 Subtilisin-like serine proteases - Prom 54276 - 54335 6.9 - Term 54382 - 54416 1.0 46 26 Tu 1 . - CDS 54440 - 55402 1120 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 55466 - 55525 6.5 - Term 55497 - 55533 4.4 47 27 Op 1 41/0.000 - CDS 55549 - 56451 326 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 48 27 Op 2 38/0.000 - CDS 56465 - 57862 1548 ## COG0581 ABC-type phosphate transport system, permease component 49 27 Op 3 39/0.000 - CDS 57859 - 59238 1306 ## COG0573 ABC-type phosphate transport system, permease component - Term 59283 - 59324 7.1 50 27 Op 4 . - CDS 59339 - 60370 1302 ## COG0226 ABC-type phosphate transport system, periplasmic component - Term 60762 - 60801 5.2 51 28 Op 1 . - CDS 60826 - 62205 1409 ## COG1113 Gamma-aminobutyrate permease and related permeases 52 28 Op 2 . - CDS 62346 - 64067 1657 ## COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes - Prom 64147 - 64206 5.5 + Prom 64092 - 64151 5.9 53 29 Tu 1 . + CDS 64202 - 64687 509 ## COG1522 Transcriptional regulators + Term 64914 - 64950 -0.2 - Term 64714 - 64745 2.1 54 30 Tu 1 . - CDS 64759 - 66189 1659 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 66320 - 66379 7.5 - Term 66404 - 66459 1.2 55 31 Op 1 4/0.130 - CDS 66466 - 67998 1554 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins 56 31 Op 2 . - CDS 68001 - 69374 1720 ## COG0160 4-aminobutyrate aminotransferase and related aminotransferases - Prom 69561 - 69620 8.0 + Prom 69624 - 69683 10.0 57 32 Tu 1 . + CDS 69842 - 70543 740 ## COG3471 Predicted periplasmic/secreted protein + Term 70563 - 70591 -0.1 - Term 70551 - 70579 -0.1 58 33 Tu 1 . - CDS 70598 - 71230 576 ## COG1309 Transcriptional regulator - Prom 71443 - 71502 5.4 + Prom 71249 - 71308 5.3 59 34 Tu 1 . + CDS 71351 - 71815 595 ## ACICU_02663 hypothetical protein + Term 71821 - 71850 2.1 - Term 71799 - 71847 8.2 60 35 Op 1 2/0.130 - CDS 71848 - 72942 1331 ## COG3239 Fatty acid desaturase 61 35 Op 2 . - CDS 72955 - 74025 1068 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 - Prom 74049 - 74108 16.0 + Prom 74055 - 74114 8.9 62 36 Op 1 . + CDS 74166 - 74861 727 ## COG1309 Transcriptional regulator + Term 74875 - 74908 1.5 + Prom 74921 - 74980 7.7 63 36 Op 2 . + CDS 75028 - 76044 839 ## COG0628 Predicted permease + Term 76060 - 76101 4.0 - Term 76055 - 76081 -0.7 64 37 Tu 1 . - CDS 76101 - 78929 3453 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Prom 78956 - 79015 6.3 - Term 79009 - 79059 8.5 65 38 Tu 1 . - CDS 79083 - 79721 203 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family - Prom 79753 - 79812 7.4 66 39 Tu 1 . - CDS 79854 - 80558 492 ## ABBFA_000993 hypothetical protein - Term 80583 - 80611 2.3 67 40 Op 1 1/0.217 - CDS 80620 - 81918 1611 ## COG0001 Glutamate-1-semialdehyde aminotransferase 68 40 Op 2 . - CDS 81961 - 82572 851 ## COG0352 Thiamine monophosphate synthase - Prom 82596 - 82655 6.8 - Term 82620 - 82667 5.3 69 41 Tu 1 . - CDS 82689 - 83066 375 ## COG4323 Predicted membrane protein - Prom 83182 - 83241 7.0 + Prom 83064 - 83123 8.1 70 42 Tu 1 . + CDS 83238 - 84701 1333 ## COG3025 Uncharacterized conserved protein + Term 84709 - 84748 9.1 71 43 Tu 1 . - CDS 84737 - 85369 621 ## ACICU_02677 hypothetical protein - Prom 85431 - 85490 3.2 + Prom 85322 - 85381 4.3 72 44 Tu 1 . + CDS 85473 - 85856 537 ## ABBFA_000977 hypothetical protein + Term 85870 - 85920 13.1 - Term 85850 - 85909 8.4 73 45 Op 1 . - CDS 85914 - 88676 2937 ## COG0612 Predicted Zn-dependent peptidases - Prom 88715 - 88774 6.3 - Term 88761 - 88790 1.4 74 45 Op 2 . - CDS 88799 - 89614 892 ## COG0384 Predicted epimerase, PhzC/PhzF homolog - Prom 89672 - 89731 7.3 - Term 89711 - 89748 5.2 75 46 Op 1 . - CDS 89763 - 91157 1528 ## COG1823 Predicted Na+/dicarboxylate symporter - Prom 91201 - 91260 3.7 76 46 Op 2 . - CDS 91355 - 92236 552 ## COG0583 Transcriptional regulator - Prom 92260 - 92319 9.3 + Prom 92246 - 92305 6.8 77 47 Op 1 . + CDS 92333 - 93511 752 ## COG0477 Permeases of the major facilitator superfamily 78 47 Op 2 . + CDS 93508 - 93633 78 ## + Prom 93780 - 93839 8.1 79 48 Tu 1 . + CDS 93859 - 94269 201 ## ACICU_02685 hypothetical protein + Prom 94280 - 94339 9.6 80 49 Tu 1 . + CDS 94378 - 94761 121 ## ABAYE0983 hypothetical protein + Term 94832 - 94860 1.0 - Term 94813 - 94854 4.0 81 50 Tu 1 . - CDS 94862 - 96118 1835 ## COG0538 Isocitrate dehydrogenases - Prom 96262 - 96321 6.3 + Prom 96092 - 96151 8.3 82 51 Tu 1 . + CDS 96319 - 97107 950 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Term 97126 - 97153 -0.8 - Term 97158 - 97201 7.1 83 52 Tu 1 . - CDS 97225 - 99462 2292 ## COG2838 Monomeric isocitrate dehydrogenase - Term 99800 - 99843 4.4 84 53 Tu 1 . - CDS 99863 - 101566 1823 ## COG3975 Predicted protease with the C-terminal PDZ domain - Prom 101599 - 101658 2.8 + Prom 101592 - 101651 5.2 85 54 Op 1 . + CDS 101739 - 103058 1130 ## COG1686 D-alanyl-D-alanine carboxypeptidase + Term 103105 - 103136 -0.7 + Prom 103069 - 103128 11.2 86 54 Op 2 . + CDS 103158 - 104444 1304 ## COG1252 NADH dehydrogenase, FAD-containing subunit + Term 104506 - 104543 2.1 + Prom 104480 - 104539 3.8 87 55 Tu 1 . + CDS 104559 - 105062 226 ## PROTEIN SUPPORTED gi|90022209|ref|YP_528036.1| ribosomal protein S2 + Term 105079 - 105127 9.1 + Prom 105081 - 105140 10.8 88 56 Tu 1 . + CDS 105166 - 106608 1252 ## COG0415 Deoxyribodipyrimidine photolyase + Prom 106636 - 106695 4.1 89 57 Op 1 . + CDS 106803 - 107543 550 ## ACICU_02695 hypothetical protein 90 57 Op 2 . + CDS 107543 - 108439 604 ## ACICU_02696 hypothetical protein 91 57 Op 3 . + CDS 108426 - 109676 1031 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 92 57 Op 4 . + CDS 109677 - 111521 1527 ## ACICU_02698 hypothetical protein 93 57 Op 5 . + CDS 111499 - 112404 685 ## ABAYE0970 hypothetical protein + Term 112625 - 112663 1.0 94 58 Op 1 . - CDS 112412 - 113548 991 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 95 58 Op 2 . - CDS 113551 - 114723 935 ## ABAYE0968 hypothetical protein - Prom 114840 - 114899 7.4 + Prom 114934 - 114993 12.4 96 59 Op 1 . + CDS 115024 - 115725 897 ## COG1814 Uncharacterized membrane protein + Prom 115757 - 115816 3.2 97 59 Op 2 . + CDS 115836 - 116882 1064 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Term 116896 - 116931 4.3 - Term 116880 - 116923 4.5 98 60 Tu 1 . - CDS 116926 - 117945 808 ## PROTEIN SUPPORTED gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase - Prom 117965 - 118024 2.3 + Prom 117905 - 117964 3.2 99 61 Tu 1 . + CDS 118076 - 119680 947 ## COG0582 Integrase + Term 119770 - 119807 3.0 - Term 119404 - 119451 1.0 100 62 Tu 1 . - CDS 119683 - 119874 120 ## ACICU_02706 hypothetical protein - Prom 120115 - 120174 10.1 + Prom 119682 - 119741 5.3 101 63 Tu 1 . + CDS 119936 - 120526 248 ## ACICU_02708 hypothetical protein + Term 120536 - 120595 -0.3 102 64 Op 1 . + CDS 120933 - 121103 237 ## ACICU_02709 hypothetical protein 103 64 Op 2 . + CDS 121124 - 121354 195 ## ACICU_02710 hypothetical protein + Term 121429 - 121455 -1.0 - Term 121415 - 121443 1.0 104 65 Op 1 . - CDS 121526 - 121843 186 ## ACICU_02711 hypothetical protein 105 65 Op 2 . - CDS 121844 - 122389 641 ## COG3926 Putative secretion activating protein - Term 122404 - 122429 -0.5 106 65 Op 3 . - CDS 122448 - 122672 264 ## ACICU_02713 hypothetical protein 107 65 Op 4 . - CDS 122653 - 122946 272 ## ACICU_02714 hypothetical protein - Term 122967 - 122997 1.0 108 66 Op 1 . - CDS 123015 - 123740 470 ## ACICU_02715 hypothetical protein 109 66 Op 2 . - CDS 123740 - 124063 255 ## ACICU_02716 hypothetical protein 110 66 Op 3 . - CDS 124064 - 128923 3269 ## ACICU_02717 Phage-related protein, tail component - Prom 128951 - 129010 3.0 111 67 Tu 1 5/0.087 - CDS 129031 - 134118 3329 ## COG4733 Phage-related protein, tail component - Term 134133 - 134159 1.0 112 68 Op 1 6/0.087 - CDS 134185 - 134856 798 ## COG4723 Phage-related protein, tail component 113 68 Op 2 6/0.087 - CDS 134840 - 135595 454 ## COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily 114 68 Op 3 . - CDS 135602 - 136300 310 ## COG4672 Phage-related protein 115 68 Op 4 . - CDS 136310 - 136660 421 ## ACICU_02721 hypothetical protein - Term 136675 - 136701 -1.0 116 68 Op 5 6/0.087 - CDS 136715 - 137056 393 ## COG4718 Phage-related protein - Prom 137095 - 137154 4.8 - Term 137065 - 137093 -0.3 117 69 Op 1 . - CDS 137174 - 141139 3584 ## COG5281 Phage-related minor tail protein - Term 141156 - 141181 -0.5 118 69 Op 2 . - CDS 141200 - 141601 335 ## ACICU_02724 hypothetical protein - Prom 141621 - 141680 4.1 - Term 141638 - 141677 5.9 119 69 Op 3 . - CDS 141682 - 142086 512 ## COG1598 Uncharacterized conserved protein - Prom 142146 - 142205 9.2 - Term 142458 - 142497 0.1 120 70 Op 1 . - CDS 142663 - 143196 522 ## ACICU_02727 hypothetical protein - Term 143199 - 143233 2.9 121 70 Op 2 . - CDS 143241 - 144170 924 ## ACICU_02728 hypothetical protein - Prom 144190 - 144249 4.5 - Term 144231 - 144256 -0.5 122 71 Op 1 . - CDS 144278 - 144490 238 ## ACICU_02729 hypothetical protein 123 71 Op 2 . - CDS 144492 - 144890 198 ## ACICU_02730 hypothetical protein 124 71 Op 3 . - CDS 144892 - 145260 336 ## ACICU_02731 hypothetical protein 125 71 Op 4 . - CDS 145232 - 145636 383 ## ACICU_02732 hypothetical protein 126 71 Op 5 . - CDS 145645 - 146013 298 ## ACICU_02733 hypothetical protein Predicted protein(s) >gi|333032526|gb|GL891900.1| GENE 1 288 - 1196 509 302 aa, chain + ## HITS:1 COG:RSc2109 KEGG:ns NR:ns ## COG: RSc2109 COG0697 # Protein_GI_number: 17546828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 2 289 3 292 316 192 37.0 8e-49 MSRQISTLIGVSALLLWSTLVGLLRLSTESFGPIYTVTYVYTISAIILFLTYGLPDLKKV SKKFLILSSLLFVVFELCFAFSITLANSSEKSIEMNIIFNMWPTLIIIMLAVLKEEKVNL LTILGVIVSFAGIVVINYHPNLNFIDNFSKNPISYLLIFLAAILWAVYCIYTKKQSNGTN AVSLYFILTAIALWILTLSTQGFHLPHVQGINGYIFVLINAVFFSMGYLAWNIGIIKGNM PVLIMLSYFSPIFSSAFSAFVLNSNLTINFWYGALTVTLGSLICWYSIRKNHVQHNQAKL AS >gi|333032526|gb|GL891900.1| GENE 2 1242 - 1856 598 204 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02604 NR:ns ## KEGG: ACICU_02604 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 204 1 204 204 347 100.0 2e-94 MSSPFISTFILFFSLLNPFLMSIYMIGLIRHTETRVFNKALIQGSLIAYVVFLLFAWGGE AIFNRYLNVRFESFLIFGGLIFLVIGYRYVFQGADTIGEMRGAPEHLAGTVAMPFMIGPG TISAAVVTGMSMSLLEAAIVIALVLFVSCSVLIAMKFSHDHLRYSHAKYIDRYFDIVGRL AALLIGTIAVDMIVNGVTRLIDKV >gi|333032526|gb|GL891900.1| GENE 3 1933 - 3105 1129 390 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02605 NR:ns ## KEGG: ACICU_02605 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 390 1 390 390 737 100.0 0 MSKVYLTLGFGLISVGMALPAFAGVTFGDPKSDTGALTISGALRGNYQDKDYGESASDQK IKFDAAILRLGYESPDWFGKVEYRCYQYDKFCDFSTLVYGYAGYHLNATDHITVGVQPIP FGPGRFWDSSFYAGINNTMGLQDASNLGANYHFELPSATKVDLAYFATDGGNYHGSSKDS ARYTANVVTSSDPLKTNLNEKNMWMARVDQDLKFLSTDDLKVSVGGSYWYSDIENKKTSA DGTRNTWALFNRINYKNLNVVLTGGRQSISNKDALSPASSTFGSFDGEYDIANKGYFYTV DTSYVFKNVKDSLNVTPYVVFSGFNKKENGFDDSQRNIVGVAWDYKNISLYTEYVMSKND PFVGGNGSSLAAGDDGKWNKLLNLMLIYSF >gi|333032526|gb|GL891900.1| GENE 4 3310 - 3663 502 117 aa, chain - ## HITS:1 COG:eutQ KEGG:ns NR:ns ## COG: eutQ COG4766 # Protein_GI_number: 16130385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Escherichia coli K12 # 4 113 122 233 233 63 31.0 1e-10 MKEVKLVDSAQLNFNLRGETPDGTAYVARALGADVSPNMGIGFARWEGAEVSWKLLYDEV IFVIEGCFELTANGQKYEVRPGQMLWIPEGTELIYGGHAVFGYVVHPGNWKELHGIA >gi|333032526|gb|GL891900.1| GENE 5 3677 - 4993 1456 438 aa, chain - ## HITS:1 COG:PA4186 KEGG:ns NR:ns ## COG: PA4186 COG0665 # Protein_GI_number: 15599381 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 4 437 7 438 439 335 42.0 1e-91 MIALPNDDNTCGWYAALPPAGPAKKLIGLQKADYAIIGAGFAGLAAARRLAELKPHARII LVDAQRVAEGASGRNSGFVIDLPHKFALSHPDPSHKQKLLSLNRSAIAQLQGLVERYNID CQWSAAGKYQGAVGERGEAHLNHFEHLMKDLGEPYRWVEKAELKKVLGTDFYSRAIFTPG SYLMQPAALVRGMGDHLPDNVELLEQSPIRSLQKSNNQWLLQGDHGSITTPKVLLATSIF TREFGYLKNRLLPVMTFASWTRPLTDQEMKVYQGELDWGLTPADHAGTTLRMTADRRILI RNTYKHVPKYGANVSDDNRRWIQEDHRKAFLARYPNLANVPFTHTWGGVYAISRNFTNFF GELEEGVYASACDNGVGAAWGTISGTLLADLVVGSDSQALKDIQYVTGMPSLNPPEPFLG LGVRTRIRFEKWRSRSEL >gi|333032526|gb|GL891900.1| GENE 6 5011 - 6366 1487 451 aa, chain - ## HITS:1 COG:PA5349 KEGG:ns NR:ns ## COG: PA5349 COG0446 # Protein_GI_number: 15600542 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Pseudomonas aeruginosa # 73 430 6 366 384 243 40.0 4e-64 MRKWLCIVCGWIYDEAKGWPADGIAPGTKWEDIPDDWMCPECQVGKADFEMLDITDIEED EIPQVAAAAVIEPVVIIGSGHAGYHVASNLRAQSPDLSITVFTADDGALYSKPALSNALA LGKDGDSLVRESALSWEQRLNIRVYPHTKVTHIDRANKKLQTTIGDYSYGKLVIATGATP IVIPIEGDSSATLSVNDLADYRRFRQQLADKKHVTILGDGLIGCEFANDLAAHGIKVTVV GLGKWAMERLIPEPLGHALQNALSQLGVEWKLQNSIRSIQSANGCYQLTLQDGQIIETDL VLSAVGLRPNIALAQEAGLETARGICTGLDHRSSDPSIFALGDCAEVNGQWAPYINPITQ ALPALVNNLLGQSTDADLKATPVLVKTPILPLSVLPAMETGEWRVEEHDGELAAGFYNEQ DKLIGFALLGRQLQHHRTEWLEKLNSCPSTV >gi|333032526|gb|GL891900.1| GENE 7 6395 - 7825 1622 476 aa, chain - ## HITS:1 COG:SMa2213 KEGG:ns NR:ns ## COG: SMa2213 COG1012 # Protein_GI_number: 16263647 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Sinorhizobium meliloti # 7 468 10 479 494 330 40.0 5e-90 MQHYLNYVDGQWRDASRQLEVINPATDKAFATVARASIEDADAAMAAARRCVNSGALTDV RPAKRTAWMLKAAEAIREIAEEGALILCRENGKNIDTAREEFDEAARYFEYYAGMADKVE GISVPLGKDYVDFTSYIPMGVSVQIVPWNFPVSICARSLAPALAAGNAVVIKSPEVSPLG MVLLIKAIEKAGFPQGAVNLLCGKGSEVGTHLVKHQDTNQIVFTGSVPTGQRILKDAAER ATPSVMELGGKSAAIAFADVDLEQLLRSVKLGIFYNSGQVCSAMSRLLVHRSRYEEVKAA VVNLAESLTVGIGESNAELTPVVSKDQQQQILAMIDKAREEGANVLTGGKAADLEGYFVL PTIIEATADMSIAQEEVFGPVMVIMPFDDEDQAVAIANGTDFGLVAGVFGENLNQTLRVA NRLIAGQVFINEWFAGGIETPFGGVGLSGFGREKGQEAIYSYVQTRNIGIRLKHSV >gi|333032526|gb|GL891900.1| GENE 8 7827 - 9017 1168 396 aa, chain - ## HITS:1 COG:CC3122 KEGG:ns NR:ns ## COG: CC3122 COG4638 # Protein_GI_number: 16127352 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Caulobacter vibrioides # 27 369 38 372 404 138 30.0 2e-32 MNSRVSQQLITVQQVDNVLNPITESNGMPNLAYTSNEYFNFERDNILSKTWVCVGFASDL PKKSYVKPVNFMGMPLVMMRNKEGELHVFHNVCSHRGMILVQQEGTIEGVIRCQYHSWSY DLNGNLKGTPHVGGINQHKDERFKCEKHGLKALRSAVWMDMVFVNISGDAPTFEEHIAPL VERWKPFLGENGLELIRSSKVGSTFELPVKSNWKLTVENYCEAYHLPWVHPALNTYSKLE DHYNIMFEDRFAGQGSYKYNLSATAGTHLPKFPSWPEDQLRHAEYVAVFPNVLLGIQADH AFAMMIDPIAPEQTIEKLRLYYVGDESLDPKYDACREATLESWKVVFAEDVFAVETMQKG RHSPGFGGGVFSPEMDLPTHFFQKWLATQAKKALEA >gi|333032526|gb|GL891900.1| GENE 9 9338 - 11011 1368 557 aa, chain + ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 11 520 11 495 661 394 41.0 1e-109 MRATSGVFKGLNPTVTVASKILVISFVLFCVLQAEQAGKAFEMVSGILLQNVKWFYLGLL TAILGFLFYLMIGRFAHIRLGKDNEKPEFTFTGWISMLFSGGMGVGLVFWSAAEPMWHYA SNPFTPGLSDESASMAMQLTFFHWGLHPWAIFCITALALAYFSYRKGLPFSLRSILYPII GNRIYGPIGHTVDILTIVITAFGVAQSLSMSVLQINSGLNQVFGFENSLSLQFIMLTILC GIATISVVMGINRGMQRLSELNMILAILLIAILLIIGPTRYLFNTLFEATGNYTQNLISM SLWSDAQKDSGWQNWWTAFYWPWWMTWGPFVGMFIARISRGRTIRELIAGVLIVPTLVTA IWMSVVGGSALKVEQDARHAYEKHAAALVKAGEPAPEPFTGGPIVKATQADNTRALFTMF DNIDSGTLGKALSIITCLLLATFLITSTDCGTHVLCYMDAEGATETPIKIRIVWGSLIAI LAGVLLYAGGLKAIQSASIIAGFPIAIFLAIMSVTLFKNLRREPQACMLLPEHARPKNDS LEESPPEKSSLQVIIEK >gi|333032526|gb|GL891900.1| GENE 10 11278 - 12942 1224 554 aa, chain + ## HITS:1 COG:PA5291 KEGG:ns NR:ns ## COG: PA5291 COG1292 # Protein_GI_number: 15600484 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Pseudomonas aeruginosa # 10 537 12 496 661 374 38.0 1e-103 MRATDVVGANTVVSIISKVLVLIFILFCAIYSDQAGKIFAYISGIILENMKWFILASTTG FVFFLLYLMGSRYGLLKFGKDDDKPEYSFFAWISMLFSCAMGVGLVFWGVAEPINHYTTN PFTKGLTDEAASMAIQLTFFHWGLHAWALYCIAALAIGYFSYRKDLPFSLRSALYPLIGN KIYGPIGHFVDILVIVITTFGISQALAIGVLQINAGLHKVFGINIGTTTQFIILFCLSSI ATFSVVRGIGTGMRRLSELNIILSIILVIILMCIGPARYITNTYLEGIGNYTQNFIGMSL WSDTQKDTEWQNWWTAFYWVWWATWVPFVGMFIAKISRGRTFRQLIGGVLIVPSLITFLW MAVFGGSALKIEQDSRHSFEKQQAALIKTAEPTSESSKKIEVSSSKEITPSTTVFEGGPI VQTVKKDNTLAVFALFDAIDGGLLGTLLSITTCILLITYLVTSQDSGTHVLCFLDTRSDK DTPIRIRLIWSVFITLISAGLLYVGGLKTIQTAIVLFGFPMVILLTIICVTLFKALHQED ISTINIVPKHPDVK >gi|333032526|gb|GL891900.1| GENE 11 13111 - 14037 769 308 aa, chain - ## HITS:1 COG:RSp0535 KEGG:ns NR:ns ## COG: RSp0535 COG0583 # Protein_GI_number: 17548756 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 297 1 295 303 217 38.0 2e-56 MKIKPLPPMNSLIVFEAAARHLSFTKAANELNVTQGAISRQIRQLEEYLGKELFLRANRN ISLTPTGLQYYQTIYSALLDVAQATAEIKKWQGEHQITVATTNAMAALWLLPKVAAFQQN NEGVDLRILTTDNISDLHKMDFDLALFYCRVPPAGMRVTTLFPEEVFPVCSPNYLAQFKE DSSPEEIFGKALLYLDDAQKDWITWAEWFEAVNYPIVKPKNRVNINNYPMLLQAAINGQG VALAWGSLVDDYLQSGALVRPVETVLRTQANFSMLEPADRGVIPSSVKHFRSWLLDQLPG QVGQKGLS >gi|333032526|gb|GL891900.1| GENE 12 14783 - 16186 1064 467 aa, chain + ## HITS:1 COG:MT0544 KEGG:ns NR:ns ## COG: MT0544 COG1113 # Protein_GI_number: 15839916 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Mycobacterium tuberculosis CDC1551 # 22 449 1 426 434 388 52.0 1e-107 MPIHTEHDPRLKSTLKTRHISMLALGGVIGAGLFVGSSSVIAAAGPAAFICYAITGIMVG LIMRMLGEMAAARPSTGSFVDFSRLAFGNLAGFSTGWLYWYFWVVVVGFEAVVGGQIINQ WLPDIPVWVISLGLLILMTSLNLLSVSSFGEAEYWFAGIKVAAIVVFLVIVGAYVFKVWP NSTASFSNLTQHGGFLPHGTLALFSGVVSVIFSMSGVEVATIAAAESDNPSQNIRRAVNT VMARILVFFVLSTLFIVVAQPWTNIIPGKSPFVATLEKIGIPGAGTMLTVVILVAVLSVL NAGLYTASRLLHVLSSNNEAPSWLARKNKRGVPVWGVLTSTLVGYGCVVIAALWPDTAFQ FLLDSSGALFLFIYLMICLSQLKLRKKWVQEGTLTFKMWLHPWLPLFVTLCIVAVLVSMG INPATRLSLLQSLIAIFVIVIAYGAMKIVSPNKASHVPQVNPLRHTK >gi|333032526|gb|GL891900.1| GENE 13 17093 - 18589 1492 498 aa, chain - ## HITS:1 COG:PA0130 KEGG:ns NR:ns ## COG: PA0130 COG1012 # Protein_GI_number: 15595328 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 7 498 6 497 497 686 64.0 0 MSQIVGHFINGEVVVDESNTQPVFNPSTGEISKQVSLGGAKTIDEAVASAKAAFPSWSKT PPLKRARIMFKFKELLEQNTAEICRLIGEEHGKIIHDAAGELQRGIENVEYACGAPELLK GEHSRNVGPNIDSWSEFHPLGVVAGITPFNFPVMVPLWMFPMAIVCGNTFVLKPSERDPS ATLYIAQLLKEAGLPDGVLNVVNGGKEAVDAILVNKDIQAVSFVGSTPIAEYIYRTATAN GKRCQALGGAKNHAIVLPDADLDNVVNSLLGAAFGSSGERCMALSVAVAVGDEIADRMIA ALKEAMANLKVGIHSDKQNDFGPVITAEHKTKVIGHIKSAEQQGATICVDGSNLVHADYE NGFYVGATLIDGVTKDMSSYQAEIFGPVLQVMRVKTMQEAMDLINEHEYGNGTCIYTRDG EAARYFADNIQVGMVGINIPLPVPVAYQSFGGWKRSLFGDLFMYGPDGVRFFTRRKTITQ RWPTAQIREGAQFSMPTL >gi|333032526|gb|GL891900.1| GENE 14 18646 - 18996 472 116 aa, chain - ## HITS:1 COG:mll2946 KEGG:ns NR:ns ## COG: mll2946 COG3450 # Protein_GI_number: 13472600 # Func_class: R General function prediction only # Function: Predicted enzyme of the cupin superfamily # Organism: Mesorhizobium loti # 39 115 43 118 122 67 40.0 6e-12 MTTMTIVKRDEIENGNLPAAGLRAGADSGNPQLGVQTLAPNAQGNLGIWECQPGGWPVID RKDTEFCYIISGKATLTDDKTGEAISVSEGDLIILPVGWTGRWDVTETVRKIFTIY >gi|333032526|gb|GL891900.1| GENE 15 19015 - 20403 931 462 aa, chain - ## HITS:1 COG:mll2947 KEGG:ns NR:ns ## COG: mll2947 COG0665 # Protein_GI_number: 13472601 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Mesorhizobium loti # 14 460 8 460 461 334 40.0 2e-91 MNEALRDELIKLPNIPYWYERTDERPSLNTEIDADVVIIGAGYTGLWTAYYLLKTSPSLR VVILEREYAGFGASGRNGGWASAIFPISLSKVAKNSSHQSALFLQQVMNETVDEIGQILQ LEGIDANYSKDGFLSIARTQAQLQRAKSSVKASKDFGLPDQWYFLDAKATKSKINVANAL GAIYTPHCAVIHPGKLVRGLAKTVEKLGAKIYEKSAVTKINSGQVTTLNGKVKAPIIVKA TESYSCQLDGYKRSIIPLYSLVLATEPIPVSVRNDLKLNHRLAFNDMRHLRVYAQMTADG RLIFGGRGAPYHYGSTISPEFDLVDNVHESIRSTINDFFPTLRSLKITHRWGGALGVARD WSPSVGFDPNTGIAWGGHYVGDGVAMSNLSGRILKNLILNIQEPINKLPIVNHASPLWEP EPLRWMGINFGLSATAFADKEENMTNRPSTVASALEALTGAH >gi|333032526|gb|GL891900.1| GENE 16 20535 - 21977 965 480 aa, chain + ## HITS:1 COG:PA1915 KEGG:ns NR:ns ## COG: PA1915 COG2508 # Protein_GI_number: 15597111 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Pseudomonas aeruginosa # 19 472 20 489 515 134 25.0 5e-31 MITIDELVKNNNLGLTFKSGRSGGKRIVKWAHAVDLPDPWHWISPGTLVMTTGGGLPTEP FEQIEWLRQLAEAQASALVIAPRDFAPSITQEMLDEATDLGFPILGASFDLEFLRLARLV IESVLQAQRDRFDAGNKLFQVYTDALWESSQLDERLQIIGQKLSLNLQILDNETLTPIFN FSTPVQKDNVPYSVKIPGRTQTTLNIINKESRFFDETFLPRILAGLLSIELEREMIDRDG IREEGEALFDDLLNGEIEFGAAKIMLERRGLLGKLVTIAIDPSNKGSRQYTDIHHIPEFY KIYPLFSRDENRIFAVLPDDSNLLNALINYFGKGTKIGISSPITAMLGFKESIFQSCLAL GRIKESQTDLIHYNHLDLELALGPKTVAEARAVVGHYFGRILEYEQTNSLPLLKTLAVFL KYDGNWKVTASKLDIHRQTLVYRLKVIEELTGIKPTTSLGITRFWIALEAAKTIGLLQDS >gi|333032526|gb|GL891900.1| GENE 17 22414 - 22968 375 184 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02619 NR:ns ## KEGG: ACICU_02619 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 184 1 184 184 347 99.0 2e-94 MPHSDLSFRALSVLHTSRYLFNKYGFHKVGVDRIIESSKTPKATFYNYFHSKERLIEMSL TFQKDGLKHEVLSIINVQKDLTVIEKFRKIYYLHADLDGLYHLPFKAIFEIAKTHPKAYQ VVVEYRNWLINEIYNLLLTTNANAAKQDAHMFLFVIDGAMVQLLDPNKQDERERLLEYFL LGFI >gi|333032526|gb|GL891900.1| GENE 18 23702 - 24214 498 170 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02620 NR:ns ## KEGG: ACICU_02620 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 170 1 170 170 339 100.0 2e-92 MQPIRVIYNQAYELLSTKHNTLGQPNLNEPIFSKEERVVVDISNPHALRRALLDYTEQVI HLETQNQCLERTIDTITQTPAGVKFQQACKILNIKRQVLASWLRQNGWDRHLNNMRTSTY YSQARGYCETKYEKVIRVRPNGEQYTFTMIEFFILPKGMTILAKAFGKDT >gi|333032526|gb|GL891900.1| GENE 19 24349 - 25110 340 253 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02621 NR:ns ## KEGG: ACICU_02621 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 253 1 253 253 523 100.0 1e-147 MSKMRELQSRAGNPDLSHWKNNKLFSIAEAALLTCGIDPLDHNHNFENNLVADLQFKNVV NWRHAILLIRAFKEGICTHEIKSPCVLLNREDYHGNGYTESKEQSALGISDIGDICIFGT RIHRDNLHIWLNYNDYFEPIQSHTISAQNSTYPSHEPIQLNSIVSLPAPIYRTPALDAVQ GVVNKFWVSYDPDGNQPPPKQIQVTEWIKANYPDIQAADICKYIDKICRHPEAKKGGNTK VNQQIKIKGVTTK >gi|333032526|gb|GL891900.1| GENE 20 25281 - 25421 83 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNKINQTRKITSGLVKSHYKTLLDALNLILNIIRLLLEIINILFL >gi|333032526|gb|GL891900.1| GENE 21 25502 - 25981 253 159 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02623 NR:ns ## KEGG: ACICU_02623 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 159 303 100.0 2e-81 MAKNWMFKGFLGDATPDDEIRACINQGKFMIEIAEKIKNNELLTDREREWAVGIVKARGK DQIINPTKYISKEESGAPPDPRRYEAVLRYYCYLKILKVQRRAIELVCHSYEDITSDNLK SWIKQEREAGQPIKRQTDDMIINNSESIIVSYEKIKGKK >gi|333032526|gb|GL891900.1| GENE 22 26445 - 26747 267 100 aa, chain - ## HITS:1 COG:YPO2233 KEGG:ns NR:ns ## COG: YPO2233 COG2879 # Protein_GI_number: 16122462 # Func_class: S Function unknown # Function: Uncharacterized small protein # Organism: Yersinia pestis # 14 100 16 101 101 90 48.0 7e-19 MNFKFAKNGTVIIAKIIKMTVLSQKEILLSPKNWSRIATLWQRLQQSFRLMVGVPDYQTY LEHMKAHHPDLTPMDAQTFYRHCVDARYPSAGGNLKKCPC >gi|333032526|gb|GL891900.1| GENE 23 26750 - 28846 2451 698 aa, chain - ## HITS:1 COG:YPO2234 KEGG:ns NR:ns ## COG: YPO2234 COG1966 # Protein_GI_number: 16122463 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Yersinia pestis # 14 689 8 683 688 996 77.0 0 MDTMQAKSTLPSKLVWSLVAIIGAISFGMLALSRGEHVNAVWLVLAAACVYSIAYRFYSL FIATKVFELNPRRLTPAHRLADGLDYVPTNKYVLFGHHFAAIAGAGPLVGPILAAQMGFL PGTIWLLVGVVLAGAVQDFLVLFISTRRDGRSLGEMAKQELGPFAGIVVMLGALGVMIII LAVLALVVVKALAHSPWGVFSIAATIPIALFMGVYMRFIRPGRIAEVSIIGFVLMMLAIV YGGHVAADPYWGEFFTLTGTQLTWCLIIYGFIASVLPVWLLLAPRDYLSTFLKIGVILGL AVGIVIALPDLKMPAVTHFIDGTGPVFSGSLFPFLFITIACGAISGFHALVSSGTTPKLV DNEVNIRMIGYGGMLMESFVGIMAMICATVLDPGVYFAINAPAAVLGTTVESAAEAVRNL GFVVTPEMLTVLAQEVGESSILSRTGGAPTFAIGMAHIISEIFNSRAMMAFWYHFAILFE ALFILTAVDAGTRACRFMVQDMVGIVIPAVKSSGSFFGNLLGTAVAVGGWGFFVYQGVID PLGGVNSLWPLFGVGNQMLASMALILGTVILFKMKKEKYVWVTIIPTIFLFITCMTAGWQ KIFHENPKIGFLAQAHKFSDAIARGEILKPAKTIAEMQTIVMSNQINAALCGFFMIVSIV MIIASIGIVRRALASPTPTVNEAPAVYTDPEVVTTRGE >gi|333032526|gb|GL891900.1| GENE 24 29013 - 29582 748 189 aa, chain - ## HITS:1 COG:VC2660 KEGG:ns NR:ns ## COG: VC2660 COG0231 # Protein_GI_number: 15642655 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Vibrio cholerae # 1 188 1 186 188 253 65.0 2e-67 MANYSTNDFKPGLKVMLDSNPCSIMENEYVKPGKGQAFNRVKLRNLKTGKVLEKTFKSGD TLEAADIVEVEMNYLYNDGEMWHFMDPESFEQIAADKTAMGDAAKWLKDDSNETCTIMLF NGVPLNVNAPNFVVLKVVETDPGVRGDTSGGGGKPAKLETGAVVRVPLFVQQEESVRVDT RTGEYLERA >gi|333032526|gb|GL891900.1| GENE 25 29656 - 30672 840 338 aa, chain + ## HITS:1 COG:STM4333 KEGG:ns NR:ns ## COG: STM4333 COG1509 # Protein_GI_number: 16767582 # Func_class: E Amino acid transport and metabolism # Function: Lysine 2,3-aminomutase # Organism: Salmonella typhimurium LT2 # 9 332 13 335 342 318 50.0 1e-86 MINYLHQEQNWQSQLSDLITDPLELLNLLELSTDQLLSGAILASEKFKLRVPRAFVGKMN AKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACAVH CRYCFRRHFPYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWLERLS SLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSKLLQL SEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLIPSEI DAIYQDVLASLPGYLVPKLVREIAGEKNKTPLFGATTF >gi|333032526|gb|GL891900.1| GENE 26 30688 - 32433 1280 581 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1056 NR:ns ## KEGG: ABAYE1056 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 581 2 582 582 1041 100.0 0 MMNNALSDIFHNQTALTRERLSFCEANIKDLNEWVTTLSIMQLGDTSKALFTAILELNEL NCSETLRFDLIQTLHPTINNVLASLEKNFFNQGVISTDRNEHIIELAMLLRCYFASIYLN IAQTSHEQLQKQKFSLFSFKQKKNLQTARILATFHALQQLTNLLYQQHMLYSEPVKGQWL IAHQLYETAVQYKYHLTNINHIQGVQHPLANITQAYAQLILLDIFNTNQIRQSEIQALFQ CSFDWARMIQILPKDTASTKYVVDPTKDHPPVYNKKQSSNFNPSIFISTQALLEHVTATM HKNAQYMSKNEKIYLSPALKFHVQTILGTTAQRRHERYEYNAALQICFGLSTAHFYLSKA KNFEETLQLSNNYNLQSESKVLSNLEKKEQQTSSYQRLSRESKTIYQTTVLDISVNGYRI KWSGEAPKNLRTGEYILVKETLHGQWRGGVIRWIKQSTEKSLELGLEILSQAMFPCAVHI QAERHTRNYHPALLLQTQNLEEIQNTLILPGSQIFREQQTIHLRLGTEEIKVYLLKAQLI TQSFIQFQFELLNEQQQYLLDQFMLKKNNTVNSQDLWEALK >gi|333032526|gb|GL891900.1| GENE 27 32415 - 34538 1589 707 aa, chain + ## HITS:1 COG:XF2624_1 KEGG:ns NR:ns ## COG: XF2624_1 COG2202 # Protein_GI_number: 15839213 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Xylella fastidiosa 9a5c # 13 243 2 228 261 68 22.0 5e-11 MGSIKVRNSLLSKRLKRTEIRLLIIDDNQLRYNQILNLLSGNDYQVNALLLDDLKSFEKQ LNTSWDVIIFGRAYDLKIEQTLSLVQASEQPQLPILLLQPDDYQAQQYQSYIQKGIYDVV PLEPLDYFYITLVRALSYSRLLQTEQHLLAELDTIHTHTQTLVDNSHKAVAIFQEGIHIK ANTEYLNLFGFQKEEDIIGLPILDVLQPNDLNIFKQRFKKISLGQFDQARFEIQSQHQGI SGNNALKLEFIPSQEEDAVQLTIDYQVDLTAPANSAPSEKSVGLSAAWPQINRHLSTHPA QANAVVLFRLAQCPERIFQQGWQTLGQYFNQLHGFLKDHAQMPIFQVDLGSYVGILQAEN SSVLNSQLTSLQTLQKEHLLKVNEQNFSVQLKLGYAFLNQPLTENSFSSLLNEAEKQGLP QVTPQLEVMPTVDKTVSPSIEAVPLDLTIEHFDHTPQSSLLQQLRQKLAQGEIHLKYQQI YDKHDQETHNYEVTSGFIAGEQWYDLNDLSDLKEDAELSIQLDRWILVEACKQLHNFIAQ YPKAKLIINLNIDILLKDKTFPELISKLLTIIGSKIESPLILQFSEQALQPYLPIAQQHI ARLRQHGAEISIRDFASSMYSDSILQQLDIHLVKLQSSKTDLLSSDQGLNNLQEKILNYL TVKPIGILLAHLNDMNLFANAWNVEARFLQGDYFQKKLDRLTDVQDQ >gi|333032526|gb|GL891900.1| GENE 28 34601 - 34825 395 74 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126642459|ref|YP_001085443.1| 50S ribosomal protein L31 [Acinetobacter baumannii ATCC 17978] # 1 74 1 74 74 156 100 4e-37 MRADIHPKYEKLVATCSCGNVIETRSALGKETIYLDVCSACHPFYTGKQKNVDTGGRIDK FKQRFAGMSRSIKR >gi|333032526|gb|GL891900.1| GENE 29 35019 - 35984 968 321 aa, chain - ## HITS:1 COG:PA2026 KEGG:ns NR:ns ## COG: PA2026 COG0385 # Protein_GI_number: 15597222 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Pseudomonas aeruginosa # 8 313 9 313 333 290 54.0 2e-78 MLKFLALDRFTILLVGMVLLATFFPVSGQAAQYFNTLTTVAIAILFFLHGAKLSREAVIE GILHWKMHLLVFAITFFIFPAIGLLAKPILLPLLGQQLYWGFLFMCFLPSTVQSSIAFTS VAKGNVAGAVCSASFSNLVGMFITPVLVSFFILGQSQHGFDPTSSIIQITLLLLVPFVLG QLLRPYVFPYMAKVPSIVKAFDQGSILMVVYGAFSGAVVAGLWHQVSWKTLLLLTIACSV LLTIIMLLALYLPRAFGFNRADQITVFFCGSKKTLASGVPMAQILFIGQPLGMIVLPIMI FHQIQLMVCGVIANYLAKSQD >gi|333032526|gb|GL891900.1| GENE 30 36124 - 36525 249 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900839|ref|NP_345443.1| lactoylglutathione lyase [Streptococcus pneumoniae TIGR4] # 2 126 4 125 126 100 42 4e-20 MRMLHTMLRVGNLEQSLKFYTEVLGMKLLRKRDYEEGRFTLAFVGYGDEENNTVLELTHN WDTSSYDLGNGYGHIAIGVEDAYKACEEIKARGGKVVREAGPMKGGVTVIAFVEDPDGYK VELIQQDANARNN >gi|333032526|gb|GL891900.1| GENE 31 36528 - 38699 2142 723 aa, chain - ## HITS:1 COG:CC0137 KEGG:ns NR:ns ## COG: CC0137 COG0477 # Protein_GI_number: 16124392 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 15 424 20 428 559 217 34.0 7e-56 MTTQTSGWVSAFKAFLDRRALIMLFLGFSAGIPILLIFSSLSLWLGEAGIDKSAVTFFSW AALGYSFKFVWAPLIDELPVPVLTKALGRRRAWLLIAQCLIVLAICTMAFADPALGHSYL VQMAAGAVLLGFSAATQDIVIDAYRIELAETEMQTVLASTYNAGYRIGMIVAGAGALFLA AHLGTAKGNYIYEAWKTTYLTMAAVMLVGIITTLLVREPKVDRIYKNYKSSDYYRLVLVF FIAVISFVLTYIYSGQVTEAISKAGNIQDSAALFGLEALRFLTATGVAILAGYLLVKIGV VNQQMAKETWIAPILDFFKRYGVKLALVLLFLIGFFRISDIIAGVISNVFYQDLNFSKEQ IAEAVKVYGVIFSLVGGFLGGLLAQRMNIMKLMFVGAVLASSTNLIFIGLVKSGKPLDMV DVQIGNNHYKVKPDEVGYWKLKVPSSSFNGTQQIDVKAGYALQDQQAETIVRAQPLVTTH SESVPLQILPLMGSDQISANSSEGSVVIRGQYFGKALSPTQKIVVNLDGQNFDAKMTDQK GVFNAAIDMQKLLSSPSKQLTASIVDGNQKILSIAHHYEVASNSVPKPELDVNIDPLPYI DTQSGQEVEISGKVIKPYSSLWLYFAIVVDNMASGLAGAAFIAFLSSLTSVSFTAVQYAI FSSLMTLTPKLLGGYSGTIVSNIGYPNFFLMTTMIGIPILILVVWVGKLLKDHQTHDIEK AGE >gi|333032526|gb|GL891900.1| GENE 32 38884 - 41502 2608 872 aa, chain + ## HITS:1 COG:VCA0975 KEGG:ns NR:ns ## COG: VCA0975 COG1067 # Protein_GI_number: 15601728 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent protease # Organism: Vibrio cholerae # 46 821 6 781 786 582 38.0 1e-165 MTQKLDQVTSSTLSLAKTNTTNVTINAFPSAFEQPDIKMTLDKTALKPEQLTHIPNFENI PASTKRIKPLNNFLGQDRAKASVEAGISLPYSGYNIFAVGTAGLGKRTMIKRLLQQHAKT VPTPDDWVYVYNFKQARQPIALRFPAGQGTKFQQTLHQTWQIILKQLERRFSAETYHNRI ERIRQETGDEQQQALVELTKEGEELDLKLISRNEKHGFVPVQLKDNQVQELTQTEIDALN SKQRAEIAANIRYMDKKLERLGLHLGDLEDDARDKVSVLNRDIATQVVMPRMDLILNKYG QVKGLEDYLKQYAQDIIDNVELILEQEEDDFAPAMFNRVPARYQANVIVSNKPNSGAPVI FEDFPTHYNLLGHVEQLTHNGTITTDFTLIRPGALHQANGGFLMLEAEQLLEQPYAWQGL KRALKSGQLKLSSLEHMLTLTGSISIEPAAIPLDIKVVLMAEPEIYYEILEVEPELGSVF KIRADFTDTLQRNDENEQAYMQLIADYVQADKLLPFDRSALAALLTDSSRQAEDQSSLSL HASTLGDLIREAHHHAFKANDKMVTDQHINLALQHRQYRLGYLRELYWQDLSRGTQLIET SGHRLGQINALSVIHYADVEFGLPSRLTASVYQGGGDILDIERSVELGGSLHAKGVLLMS SFLKAHFGREQILHFSAALAFEQSYGQVDGDSATVAELSALISAISQLPIDQSWAITGSM NQLGQVQPIGGVNAKIEGFYDACKLQGLTGKQGVIIPRQNMQHLMLRQDVIDAVRMGQFH IHAIDTIDQALEILMARPVGTLDKKGKYSKHSIYAAVMEQLEYWQAIEDGAEVEEEPKKK KKNKKKIKKHEELTADDLPQETQEEVATLKQK >gi|333032526|gb|GL891900.1| GENE 33 41560 - 42489 1047 309 aa, chain - ## HITS:1 COG:PA0123 KEGG:ns NR:ns ## COG: PA0123 COG0583 # Protein_GI_number: 15595321 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 297 1 294 302 191 35.0 1e-48 MLDQLRAMGVFACVVEKSSFSGAARELGITTSAVSQQIRSLENEMDVILLHRSTRKLSLT EAGQAFFSSCQEMLAAAERGKIRINELRDDLIGDLRIATTPDLAVQHIIPALSHWMSAHR GLSVHFEVGHRYIDLIEERIDIAVRMSSTAVEESDSVIPMAFVDQILVASPSYLNQTSPI LHPNDLNNHELLSINAMNDSRSFNFQHAKTGEKLNIEMASRLQSNNLQVAKALCQQGHGI ARILYLDAQKELKNGSLIEILPDWKLPAFTLYAEIAKHDQQPMKIQRCVEALKQYFSQLA GGRAMQIVR >gi|333032526|gb|GL891900.1| GENE 34 42591 - 43370 757 259 aa, chain - ## HITS:1 COG:PA3623 KEGG:ns NR:ns ## COG: PA3623 COG0739 # Protein_GI_number: 15598819 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Pseudomonas aeruginosa # 28 258 59 295 297 149 39.0 6e-36 MKIMMLSVAVGFTVAMAGCASKPQINNSSRYAMAPNYYTVRSGDTLSGIAMRYGLDYLSI AEMNGIAPPYRIYVNQSLRLKKSSSPRTVSTQVMAQPEPIKRQTIALPTTTAPTTTTPPP ATVAPSTNTTVGASIPSSSLRWVKPNNGPVIQGFNLANNVKGIRYGGNQGDPIYAAADGQ VVYAADGLKEYGNLVLIKHIDGYISAYAHNSKMMVKSGDNVTAGQKIAEMGSSGASRVML EFQIRLDGKPINPANLLPN >gi|333032526|gb|GL891900.1| GENE 35 43536 - 44303 824 255 aa, chain - ## HITS:1 COG:PM1612 KEGG:ns NR:ns ## COG: PM1612 COG0496 # Protein_GI_number: 15603477 # Func_class: R General function prediction only # Function: Predicted acid phosphatase # Organism: Pasteurella multocida # 1 251 1 240 246 221 47.0 1e-57 MNILIANDDGVFAPGIQALADALKPLGRVVVVAPESERSGFSSALTLDRPLRPIQIAEDV WAVNGTPADCVYLSMNGLFDFEFDLVVSGINSGANLGDDVLYSGTVGAAFEGRLMKQPAI AVSLAGPDVRSYDHKDDYAQAAKWVHDFIAKGLPALPPRHIFNINIPDVPQLKGTQITYQ GRRAQSKPITSHVDPRGRQVYWIGLAGEAVTDPQRIASQIQSDFFAVANGFVSVTPIQMD ATNYAVLEDLQASLG >gi|333032526|gb|GL891900.1| GENE 36 44406 - 44777 375 123 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001023 NR:ns ## KEGG: ABBFA_001023 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 123 1 123 123 221 100.0 5e-57 MKTFAPFFQVLGISITLCTQAVFADEGISTQEADSLIKDDIASTQVLQEICPTFVGANKK LETNTQKIIAMYLSGYSNKSITFSALQNDSEYKTLLSEARQAAKEMDHHEQHELCEEVVN YKD >gi|333032526|gb|GL891900.1| GENE 37 44925 - 45347 551 140 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02641 NR:ns ## KEGG: ACICU_02641 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 140 1 140 140 213 100.0 2e-54 MFMKKSLVQSLSVVLLMTMATVGYAADKKKTAEKKTENENVVEVTPSKGTTPEELAAIQV LSEICPSLIGKKDAEFAQGYERLVKDYLPNEADPVAALEKRSKDKSFKKVLKEARNDAKA AGNEQNTLVCQDVKAYQSQN >gi|333032526|gb|GL891900.1| GENE 38 45474 - 46622 1218 382 aa, chain + ## HITS:1 COG:PA3999 KEGG:ns NR:ns ## COG: PA3999 COG1686 # Protein_GI_number: 15599194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Pseudomonas aeruginosa # 1 382 6 385 386 370 48.0 1e-102 MTRKSAIAALLLLPSFSYAATVLSAPPELNNKSYVLMDYETGQILASKNENEKLAPASMT KMMTSYIIEQKLLKGELTENEQVRMNESAWCKGSSSESCMYVPLNGTATVLEMLRGIIIQ SGNDASKAMAEHIAGNEGTFAHMMNQEAKRIGMTNTQFINSTGMPAEGHYSTAKDMAVLA QHIIKDSSKYYPIYSEKEFTFNGIKQGNRNALLYTDPSVDGLKTGHTDEAGYCLTTSSKR GPMRLISVIFGTPSMSERADQTRALLAWGFANFETANVQPANQVLAKAKVWFGKENEVQV GLAENFNVTMPKGKADGIKTQLVVQPNLSAPLQKGQVVGKLVASLDGKVIAEKPLVALKP VEEAGFFARLIDHIKQFFSNLF >gi|333032526|gb|GL891900.1| GENE 39 46722 - 47267 629 181 aa, chain + ## HITS:1 COG:NMA0833 KEGG:ns NR:ns ## COG: NMA0833 COG0663 # Protein_GI_number: 15793804 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Neisseria meningitidis Z2491 # 5 175 4 174 176 236 67.0 1e-62 MAKNIRPYLDHHPQIDPSCYIDEMSVVVGDVKLAENVSVWPFAVIRGDVNSIQIGKNSNV QDHCMLHVSHKNDTKPNGSPLIIGEDVTVGHHVTLHGCTIGNRVLVGINTVILDDVVIED DVMIGAGSLVPPRKVLKSGYLYVGSPVQQVRPLTEKELAFLPYSARHYVKVQNNHKDNQI N >gi|333032526|gb|GL891900.1| GENE 40 47387 - 47875 606 162 aa, chain + ## HITS:1 COG:PA2625 KEGG:ns NR:ns ## COG: PA2625 COG0494 # Protein_GI_number: 15597821 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 3 156 2 153 156 137 50.0 7e-33 MAAWTPHVTVATVVEKDGRYLFVEEHSEGFVHTVFNQPAGHVECGETLTEAAIRETLEET GHHIDIDALLGIYTYTPPMFPDRTYYRFCFLAHVTHVESDPKLDTGIVSAVWMTLDELKE SARARSPLVIKAIEDAMKGQHYPLALIYEHPFSPSLTSHLDA >gi|333032526|gb|GL891900.1| GENE 41 47880 - 49013 1280 377 aa, chain + ## HITS:1 COG:PA2626 KEGG:ns NR:ns ## COG: PA2626 COG0482 # Protein_GI_number: 15597822 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Pseudomonas aeruginosa # 2 371 10 368 375 508 68.0 1e-144 MQQRVIVGMSGGVDSSVSAALLLQQGYQVEGLFMKNWEEDDGTEYCTAMEDLADAQAVAD KIGIKLHTANFAMEYWDRVFEHFLAEYAAGRTPNPDILCNKEIKFRAFLDHAMTLGADFI ATGHYARRAETAYNSKGEAYAPLLRGLDKNKDQTYFLHAVHGREINKTLFPVGEIEKPEV RRIAEELDLATAKKKDSTGICFIGERRFNDFLKQYLPAQPGKIVLDNGKEVGEHHGLMYY TLGQRGGIGLGGMKGASEGAWFVLHKDVANNRLVVGQGHDHPLMQSTQLWSEAIDWVAGE QNIPAEGLRCTAKTRYRQPDQACTVFIDENSEHGVRVEFDEPQRAVTPGQSVVFYSDEVC LGGGVIHHTNAPTPNFI >gi|333032526|gb|GL891900.1| GENE 42 49027 - 49761 710 244 aa, chain + ## HITS:1 COG:PA2627 KEGG:ns NR:ns ## COG: PA2627 COG2915 # Protein_GI_number: 15597823 # Func_class: R General function prediction only # Function: Uncharacterized protein involved in purine metabolism # Organism: Pseudomonas aeruginosa # 16 238 5 205 206 92 29.0 5e-19 MVELPFQQSQALNVRQNRALALAGVFQATQLTHMTAMTGQQSIGESGNFYFELLIKASLN IRPTTNNNAVQTLDFFNQLADISLGLKTLENCITQPFTNAPKSRLPKMRSAKLPMSYAMS LLQLEKKVYSNPEYVAIIEKAQQKILKQLSFFDNNYLHPSILANLAQTYVDTAGQINPRI LVRGNAEAFKDTNHTNRIRACLFTGLQMAHLWRQLGGSSWNMIFSKRKLLQDIQALARLQ YQVI >gi|333032526|gb|GL891900.1| GENE 43 49816 - 51204 1740 462 aa, chain + ## HITS:1 COG:PA2629 KEGG:ns NR:ns ## COG: PA2629 COG0015 # Protein_GI_number: 15597825 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Pseudomonas aeruginosa # 1 455 3 456 456 637 70.0 0 MNALTALSPLDGRYASKCDALRPFLSEFGLIHARVTVEVRWLQALSNRPEIVEVAPFSAE TNAALDAIVSNFSEEDANRIKEIERTTNHDVKAVEYFLKEKIAGIAELQNAGEFIHFACT SEDINNLSHALMLKNGREVLVSSMKQILNAISALATTHAEQPMLSRTHGQTASPTTLGKE MANVAYRLARQIKQFENVELLGKINGAVGNYNAHLSAYPNVDWPAHSQAFVESLGLTFNP YTTQIEPHDYMAELFDALRRFNTILIDFNRDVWGYISLGYFKQKLKEGEVGSSTMPHKVN PIDFENSEGNLGIANAVLAHLGEKLPISRWQRDLTDSTVLRNMGVGFAQSLIAFDACLKG IGKLELNANRLNEDLDQAQEVLAEPIQTVMRRYNVEKPYEKLKALTRGQAMTRDMMVDFV NGNELAQVPSEERARLAELTPATYTGNAAEQAKQINELISKI >gi|333032526|gb|GL891900.1| GENE 44 51287 - 51928 537 213 aa, chain + ## HITS:1 COG:PM1879 KEGG:ns NR:ns ## COG: PM1879 COG3647 # Protein_GI_number: 15603744 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pasteurella multocida # 12 196 13 189 205 77 30.0 2e-14 MIEKEFKVKHYIALGLLFIAIIISGIQPLEFEAYLLHQAGTVFMVILLFIIFKKIGLDFL SFTFYLLFLLIHIIGAHYLYSYVPYNDWIQQVFHFNLDQYMGWSRNMYDRLVHLAYGVLL YPLIYRVFQVWLPTARPFSLFLLVVQFVMASSVFYELIEWVIAIGLSPEQAENYNGQQGD MWDAHKDMLIATIGAILYGLIALLTTPKNQTIN >gi|333032526|gb|GL891900.1| GENE 45 51978 - 54164 2247 728 aa, chain - ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 169 416 807 1050 1052 106 37.0 2e-22 MTRIIVASKEGLDVLQDGQLNKVVLNQPTIIQIGVSQKDIASMEKQGGSLVIHLKNGETI VLENFFNEATNTTEHSLVFPTEQGKFVEAQFDAQGKVIDYRGLNHVTDLAYTSTSPSTAT MAVDNDPSFSMGNVLKAGLAVLAAEGLYLWAFDKDDKDDSPSTPDLIAPAAPTATLADDT VTVTGKTEANAKIYIKDAAGNTVASGVADASGNYTIKLDKPLVNGDKLNVIAQDAAGNNS KVTVVTGTKDTIAPDVPQAQLSDDGSLVTGKAEANAKITVYDATGKVLGTVFANKDGIYS LKLTPPLTSEAGGKVVAEDAAGNKSEEVKIIAGKDTIPPASPFVEVNKEGSVIHGKTEAN AKVQIKDADGKVIGSGTADAQGEFQITLSPALKEAQKGTVVVEDAAGNVSKPVEITPGFD SIAPDKPTVQINTDGTSVTGTAEANAKIEIKDTTGKVIGSGTADANGKFTISISPALTDN KHASVSAIDNAGNKSEVVDIVGTKDTTPPAKPILNSVDDDVGAVKGAITAGSETDDARPK LTGSGEANATLTIYDNGVAIGVVTVTSGRSWSFTFDKDLALGKHTITLTQTDAAGLTSEA SSPFTFYVVAPKTASLSETSVDTLSTEGPSLADSVGLHTLKAAQSTTTETNNPQKSVPLD DLLKSSTASESDPIAKLLSSTALKTTQASEPIEVNASVGQITSNPDHPLPDTTSSVLQNL LDQTYPVV >gi|333032526|gb|GL891900.1| GENE 46 54440 - 55402 1120 320 aa, chain - ## HITS:1 COG:PA1832 KEGG:ns NR:ns ## COG: PA1832 COG0616 # Protein_GI_number: 15597029 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Pseudomonas aeruginosa # 14 294 45 327 341 295 53.0 7e-80 MLFHLPKLPAEIRVSHLNARVNEQRKKIAQTTASRLELLQLAQQLAKEAKIRRKNNQKIF VLDFKGDIQASAVENLREEITLILATAKAGRDRVVVRLESPGGMVHGYGLAAAQLVRLRD AGFHLTICVDKVAASGGYMMACIANEIISAPFAVVGSIGVVAQVPNFNRLLKEHNVDFEL YTAGQYKRTVTMFGENTPEGKAKFEEELQQTHVLFKHFVEKYRPQLNVDKVATGEHWYGQ DALDLNLVDKLQTSDEYLLALLPQHDVYVINTRKKATLGEKLGLQAAQMADSLIPAVMNK VADTLAKANSTLVQMRDTKF >gi|333032526|gb|GL891900.1| GENE 47 55549 - 56451 326 300 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 53 286 2 230 245 130 37 4e-29 MNTIDITNSLEKDKLVNTEQSQLTDTQLHHGTSYVSHFEPHASKKPNSTEIKISAQDAHV YYGDFEAIKGIDLDIYQNEVIAFIGPSGCGKSTFLRTLNRMNDTIDGCRVTGKITLDNKN IYDPNLDVVLLRAQVGMVFQKPNPFPKSIFDNVAYGPKLHGLARDKYDLEEIVENSLRKA GLWEEVKDRLNQPGTGLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPIATAKVEELIS ELSDQYTIVIVTHSMQQAARVSDRTAYFHLGDLIEVNSTEKVFTQPDHQLTEAYITGRFG >gi|333032526|gb|GL891900.1| GENE 48 56465 - 57862 1548 465 aa, chain - ## HITS:1 COG:BMEI1987 KEGG:ns NR:ns ## COG: BMEI1987 COG0581 # Protein_GI_number: 17988270 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Brucella melitensis # 20 465 8 436 436 378 49.0 1e-104 MSTSNTSSPMDQNVFDPQAAAQARDRRKKVIEKSLAKRHRKEKAFRFAGLSAVVIGLAFV ALLFGSILAKGLPAFWQTSMNVPVYFDPKVIDAGPVPVRTQGETPAHYQERYVDWQTKMG MVDWDSLIVNGMIAKDPSLASQRDYLSSLYASSEAYRLRDMVFADPSLIGKKENLTFLGD ANVDVWLKGNIDRSLPDDQQQLDPEIRKLADDLKAKGVLENTFNTTLFKNPDSRSSPAIS GLAGAFMGSLFMMLIVIIISIPIGVASAIYLEEFAPKNVITDIIEVNINNLAAVPSIVFG LLGAAIFIGWMHLPLSAPFVGGLVLSLMTLPTVIITTRASLKAVPPSIRQAALGLGASKV QTVFHHVLPLALPGIMTGAIIGVAHALGETAPLLLIGMSAFVASVPTTPFDQATALPVQV YLWQGNELRNFFEGRTAAAIIVLLALMIGLNSLAIWLRKKFEVRW >gi|333032526|gb|GL891900.1| GENE 49 57859 - 59238 1306 459 aa, chain - ## HITS:1 COG:AGc740_2 KEGG:ns NR:ns ## COG: AGc740_2 COG0573 # Protein_GI_number: 15887769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 151 459 1 319 319 350 63.0 3e-96 MNLLLIGVLLALVAIAYQLGLRKSRHLAGKGSNSATLHSRPGYYGALVGLWCGIPAFLIL IIWNLVEPSILNHIIFNNVPASVTASLDEAARSVLVDRVQAIASGFGVSDHPAAYELAAA QQYAKFQTIGSFAKFAVVVCAALLGLVWAKKKISQEYRARNQVERAINVGLILCSGVAIL TTIGIVMSMFGEAMHFFHFVSPIDFFFGTEWNPGFSTSGNAEGSYGLLPLLWGTLMVSGI ALLVAVPVGLMIAIYLAEYASPWLRSWAKPTIEVLAGIPTIVYGVFAMMIIGPFFKAAGA YVGIEINATSALTAGFVMGIMIIPFVSSLSDDIITQVPRALRDGSLGLGATKSETIRQVV LPAALPGITGAFLLAVSRAVGETMIVVLAAGNSPLLHANPFEAVSTVTVTIVKQLTGDTD FASPQALVAFALGLTLFVITLGLNIVALYIVRKYREQYE >gi|333032526|gb|GL891900.1| GENE 50 59339 - 60370 1302 343 aa, chain - ## HITS:1 COG:SMc02146 KEGG:ns NR:ns ## COG: SMc02146 COG0226 # Protein_GI_number: 15964262 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Sinorhizobium meliloti # 27 339 24 341 344 355 55.0 1e-97 MRLNPRQIAIALAVTGAAVTTTANAARDTIQIAGSSTVLPFASVVAEEFGNTFPQFKTPV VGSGGSSAGLKQFCQGVGDNTIDVANASRKIKSTEIEACNKAGVKQIQEIKIGYDGIVFA SSSSKAAYKLKPYHVFAALAAQLPSKGKLVPNPYTNWNQIDKSLPNEPITLVIPASNHGT REVFQEKMVEAGCEAYEYFKSLDKDAQKKACSTFRKDGRVIEIAGDYTETLARLKTSPSA VGVFGLSFYDMNRDKLRVATVNNVVPSEKTVLNGTYPVSRPLYFYVKGEHLKSVKGLPQY VEYFLSKKATGKGSKAERDGLIAMSDAERAKVLADFKAGKTVK >gi|333032526|gb|GL891900.1| GENE 51 60826 - 62205 1409 459 aa, chain - ## HITS:1 COG:YPO3421 KEGG:ns NR:ns ## COG: YPO3421 COG1113 # Protein_GI_number: 16123570 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 2 445 3 446 465 545 65.0 1e-155 MDANNKHELKQGLSNRHIQLIALGGAIGTGLFLGLSQTIKLAGPSILLGYAIAGIIAFLI MRHLGEMVVEEPVSGSFSYFANKYWGKMAGFMSGWNYWVLYVLVSMAELSAIGTFIQFWW PEIPTWLTALFFFILINGINLVNVRFFGESEFLFSCIKIVAILSMIGFGAYLLLSGSAGP QAGVANLWQHGGFFPHGIHGFIMALAVIMFAFGGLELIGIAAAETKKPETTIPKAVNQIV YRILIFYIGAIGILLCLYPWNMVAEGGSPFVLIFQSLNSNGVANVLNFVVLIAAISVYNS CIYCNSRMLHGLAEQGNAPAILKKVNSRGIPVPAAIVSASITAVCVVVNYLIPGQAFQLF MMLVVAALVINWLMISVTHLKFTKAMKLQKRQTKFQSIMSPWSNYLTISFVCFILIIMAM TPDMRLAVILGPIWLAVLAIMYFFKYRKKMVAMPEVQSN >gi|333032526|gb|GL891900.1| GENE 52 62346 - 64067 1657 573 aa, chain - ## HITS:1 COG:CAP0025 KEGG:ns NR:ns ## COG: CAP0025 COG3961 # Protein_GI_number: 15004729 # Func_class: G Carbohydrate transport and metabolism; H Coenzyme transport and metabolism; R General function prediction only # Function: Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes # Organism: Clostridium acetobutylicum # 5 546 7 550 554 439 41.0 1e-122 MFIEIGEFLNLRLKQMGIQHLFGVPGDFNLSYLEQVEADPQLEFIGNCNELNAAYAADGY ARINGFSALATTYGVGDLSAINGIAGAYAENVPLIHISGIPPLHAVQKGTLIHHTLVDGN YDNIMNCMKEFTVAQTRLTPANAASEIDRVLRQCFLERRPVHIQLPGDITHVKIEVSERP LDLSYPAVEPELLQSVVSKLCDIIENAQSPALLIDNEASVFGVTSLLNDLSQKCSIPFAG MNTAKNIMDEGSPRYIGTYVGGASQPHVKNIIEQSDCLIGVGARFTDVGSAVFTHQIETK NYIEIKSYGLNIFGQDFPGIEIGQLLVELNKKVAPRKSSIPLLEKQPQKVIEAPAQQKLS QDVLWNYISGFLKEDDVIIGEVGTSNSALSGIKLPATAKYIAQPLWGSIGYTLPALLGSL LAAPERRQILFIGDGSFQLTVQELSTIIRHGLKPIIFLLNNGGYTIERLIMGENAAYNDV QNWKYTEIPAVFNGKKGHTTYVVETAGQLKSVLDNVHQNDQLTFIELKLPAMDAPVSLKK FASVIARFDYGDRGYEILKERSQPVKCKDAISF >gi|333032526|gb|GL891900.1| GENE 53 64202 - 64687 509 161 aa, chain + ## HITS:1 COG:SMc03210 KEGG:ns NR:ns ## COG: SMc03210 COG1522 # Protein_GI_number: 15966694 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Sinorhizobium meliloti # 1 143 4 146 159 120 41.0 9e-28 MDKFDWQIIQALQKNGRLTNQEIGDLIGLSASQCSRRRQLLEQKGVILGYTARIQQQALG LEVTAMIHINLRTHEAKSQQAFQELIEAEDNIQDAFSISGDADFILKVVAENLEQLSQFV TERLLSYNFIGHIKSYIVLKKIKEQNHFLIKPKSMSYHHSQ >gi|333032526|gb|GL891900.1| GENE 54 64759 - 66189 1659 476 aa, chain - ## HITS:1 COG:BS_dhaS KEGG:ns NR:ns ## COG: BS_dhaS COG1012 # Protein_GI_number: 16078991 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Bacillus subtilis # 1 458 6 476 495 315 38.0 1e-85 MQQANMLNEFKLIIGGQLCSGEQGELEIINPATGLTAAHCAKASVAQVNQAVSAAKQASK AWQLVSHDERKSILNKIADGIEKHAEMLAELVVLEQGKPLALAQMEVQGAIGWTRYAASM DLPVEVIEDSETKRIERHRQPLGVVASITPWNWPLMIAVWHIMPALRAGNVVISKPSEYT PLSTLRLCEIIQQEVPAGVISIVVGAGEIGEALSSHPDVQKVVFTGSTRTGQHIMAGAAQ QLKHLTLELGGNDAGIVLPDANIDEIAAKIFNMAFLNAGQTCAALKRLYVHESQYEALSQ KLADIANAQVVGDGMASSTTFGPVQNQMQYNKVKALIAEAIAQGAKALSGQQQLPEQGYF IAPTILTEVSDSCRVVQEEQFGPVLPVLKYTDINDAIARANDSEFGLGGSIWSSDLKAAQ TYATQLQCGTVWINTHAEVLPHAPFGGWKMSGLGAEFGLEGLLENTIGQTVHISKV >gi|333032526|gb|GL891900.1| GENE 55 66466 - 67998 1554 510 aa, chain - ## HITS:1 COG:HI0946.1 KEGG:ns NR:ns ## COG: HI0946.1 COG0076 # Protein_GI_number: 16272884 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Haemophilus influenzae # 1 510 1 511 511 813 75.0 0 MVDFAEHRKALLCNDAQSIADYESAMGEAVKAVSAWLQNEKMYTGGSIKELRSAISFQPS KEGMGVQQSLQRMIELFLNKSLKVHHPHSLAHLHCPTMVMSQIAEVLINATNQSMDSWDQ SPAGSLMEVQLIDWLRQKVGYGSGQAGVFTSGGTQSNLMGVLLARDWCIAKNWKDENGNP WSVQRDGIPAEAMKNVKVICSENAHFSVQKNMAMMGMGFQSVVTVPVNENAQMDVDALEK TMAHLQSEGKVVACVVATAGTTDAGAIDPLKKIREITNKYGSWMHIDAAWGGALILSNDY RAMLDGIELSDSITLDFHKHYFQSISCGAFLLKDEANYRFMHYEAEYLNSAYDEEHGVPN LVSKSLQTTRRFDALKLWMTIESLGEELYGSMIDHGVKLTREVADYIKATDGLELLVEPQ FASVLFRVVPEGYPVEFIDSLNQNVADELFARGEANIGVTKVGNVQSLKMTTLSPVVTVD NVKNLLAQVLAEAERIKDAIASGNYVPPID >gi|333032526|gb|GL891900.1| GENE 56 68001 - 69374 1720 457 aa, chain - ## HITS:1 COG:HI0949 KEGG:ns NR:ns ## COG: HI0949 COG0160 # Protein_GI_number: 16272887 # Func_class: E Amino acid transport and metabolism # Function: 4-aminobutyrate aminotransferase and related aminotransferases # Organism: Haemophilus influenzae # 1 455 1 453 454 686 71.0 0 MSVTSVNPATNATNEYYLTRQSQMESNVRSYPRKLPLAIAKAQGCWVTDVEGTQYLDCLA GAGTLALGHNHPAVIQSIQDTLASGLPLHTLDLTTPLKDAFTEALLAYLPGGKEEYCLQF CGPSGADATEAAIKLAKTYTGRSSVISFSGGYHGMTHGSLAMTGNLSAKNAVNGLMPGVQ FMPYPHEYRCPLGLGGEAGVDALTYYFENFIEDVESGVTKPAAVILEAIQGEGGVVTAPV KWLQKIREVTEKHNIVLILDEVQAGFARSGKMFAFEHAGIEPDVVVMSKAVGGGLPLAVL GIKRKFDAWQPAGHTGTFRGNQLAMGTGLVVLETIKEQNLAQNAQERGEFLQAELKKLAT EFPCIGNVRGRGLMIGVEIVDERKPADRIGSHPADSQLAAAIQTACFNNKLLLEKGGRNG TVIRLLCPLIITQEECVEVIARFKKAVAEALVAVRGA >gi|333032526|gb|GL891900.1| GENE 57 69842 - 70543 740 233 aa, chain + ## HITS:1 COG:PA4495 KEGG:ns NR:ns ## COG: PA4495 COG3471 # Protein_GI_number: 15599691 # Func_class: S Function unknown # Function: Predicted periplasmic/secreted protein # Organism: Pseudomonas aeruginosa # 13 233 12 234 236 144 39.0 1e-34 MRTLAISTLLLGTVLSPMVFAQDDNALHYNIVNVQAEASRQVSNDEMHATLYIEKSNKQP AELSNQINQLMNQALATSRKYPQVKVETGAQSTYPIYDNDSNKLKEWRGRAEIRLESKDF KAASQLINELQQSFQTQSINFSVSDEQRKKVENELMVEASKNFQQRAQMLTQAWNKSQYS LVTLNLNTNNYFPQPVMRASLAKFAAAEAAPAQDMAAGESKITVNANGSIQFK >gi|333032526|gb|GL891900.1| GENE 58 70598 - 71230 576 210 aa, chain - ## HITS:1 COG:PA1836 KEGG:ns NR:ns ## COG: PA1836 COG1309 # Protein_GI_number: 15597033 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 16 204 3 191 193 134 33.0 1e-31 MVSAQNLLERLYPGRRAALKRQILLDALDCFLEQGIETTSIEMIRAKSESSVGAIYHHFK NKEGIVAALFFSALDDQTALRDEYLKQSKTLKDVVEALIYSYVDWVSEQPEFAKFLITAR FNIIEGEEQQQLTQKNKSRNQKIFSLISNFEEFKAFSLIPHELLLSLVIGSTESYCRAWL SQRVKADPKDYREILAKAAWNSLQDLRLEH >gi|333032526|gb|GL891900.1| GENE 59 71351 - 71815 595 154 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02663 NR:ns ## KEGG: ACICU_02663 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 154 1 154 154 303 100.0 2e-81 MATTLELWNKVTAFPKGKWTFSRMLCLKAPYFGSISPLFIELKPNYCEISIKKKRSVLNH IGTVHAIAMCNMAELAGGTMTEVTVPSTHRWIPKGMTVEYLKKAETDLIAIATPVEADYN WEKAGEYLVNVDIYDTHKDKVFHATITMWISKKK >gi|333032526|gb|GL891900.1| GENE 60 71848 - 72942 1331 364 aa, chain - ## HITS:1 COG:PA4888 KEGG:ns NR:ns ## COG: PA4888 COG3239 # Protein_GI_number: 15600081 # Func_class: I Lipid transport and metabolism # Function: Fatty acid desaturase # Organism: Pseudomonas aeruginosa # 15 361 12 360 370 409 56.0 1e-114 MNMPVKVEYFKNPKNRDLTPAELEAFAKELDQIKQEVLDDLGEKDAKYIRRVYAAIRYSS FLGRACLFAGWFPPAWILGTGLLGFSKIMENMELGHNVMHGQYDWMNDPKFNGQTYEWDT VGTSDNWRQTHNYKHHTYTNIKGIDDDIGYGLLRLFPEQRWKPGFLLQPIYSIPFCLLFQ WGVAIQNLEIGRVLYKRKTKAQFLEELKPVNKKIGKQLFKDYVFFPLIAGPAALPVFTGN LVANGLRNIWTFSIIFCGHFTKDAEVFPKSVLQEESRGHWYMRQIRGSSNLTGSEAFHIL SGHLSHQIEHHLFPDIPARRYRQMAPKVEAVCKKYGLNYNNASFVKQFGQVVGRIVKYAF PFKK >gi|333032526|gb|GL891900.1| GENE 61 72955 - 74025 1068 356 aa, chain - ## HITS:1 COG:PA4889 KEGG:ns NR:ns ## COG: PA4889 COG1018 # Protein_GI_number: 15600082 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 28 356 34 366 366 166 31.0 7e-41 MQAIEKRNSLFNSLTQAVFDKNMANFWLQKINPLWSVQHGLVQIVKKEFVAHDTVSLTLK CNRLVKMGAAGQHHPVIVEIAGRRYERTYSLTQIDAEHLRLTVKKVADGIVSNWFIAESK IGDVFELGQPYGDMQQNIQTPKLIMLAAGSGITPMLSLITAIKQSQQLEKTQVQLLYWVK QRSDAAFTEYFEQVAEQNPNFSYQVFYTQETPNDERLNAEHLALVDGIENSTVYACGPSG FVSTVEQLFEKAPTVLTEAFSLTNESSADDIGYVNVTLTQSNKVIAIPKGQSILVSLEHE GLKPTHGCRMGICNKCVCSKTQGSTRNLLNGSQNTEPSQLLKICVNSAQSDLVIDL >gi|333032526|gb|GL891900.1| GENE 62 74166 - 74861 727 231 aa, chain + ## HITS:1 COG:ECs4894 KEGG:ns NR:ns ## COG: ECs4894 COG1309 # Protein_GI_number: 15834148 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 36 222 30 213 234 139 42.0 4e-33 MTQTSLSQSPNDTTSSQDVIEIKTVTRSVGRKATITKEELFQAALNLIGPQKSIASLSLR EVAREAGIAPNSFYRHFKDIDELAISLIDRAGIVLRKIIRQARLRASLQDSIIRSSVEIF LQQLDADEGNLSLLLREGFTGSASYKAAVDRQLNFFQQELQEDLIRLERLNNNHLYHPEL VAKAITQLVFHMGAKVIDLPIDQRAEVAEQTMIMIRMILEGARHLDEAKIR >gi|333032526|gb|GL891900.1| GENE 63 75028 - 76044 839 338 aa, chain + ## HITS:1 COG:RSp0411 KEGG:ns NR:ns ## COG: RSp0411 COG0628 # Protein_GI_number: 17548632 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Ralstonia solanacearum # 2 338 6 340 341 198 38.0 1e-50 MQSLSNRQSLIASYILMGIFLLSVIPLHLLASFFAGFLIYEIIISLSSIVERYIDGQRAR IFISILLSIITISLLAFFITSLISFVVYDLKGVGLHSINGKVDQTLLHLQAEIGKYLPGY IPDSVTELKDEIFAFMKDNVTTLKNASSDILHNLVTMVMGLIIGILVAIHGFHRRTPQPV FKSLLIQRIQKLSISFRNVVFAQIKISAINTLLFILFAFVLLPIWGVHLPFAKTLTILTF MFGLIPILGNLISNTLTFIAALTISLGLAGVALLYLVLVHKLEYFINAKIIGHKINANAW EILLAMLIFESIFGLSGLIAAPIFYAYLKLELKDARLI >gi|333032526|gb|GL891900.1| GENE 64 76101 - 78929 3453 942 aa, chain - ## HITS:1 COG:PA3308 KEGG:ns NR:ns ## COG: PA3308 COG0553 # Protein_GI_number: 15598504 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Pseudomonas aeruginosa # 1 938 3 948 950 769 46.0 0 MQQYAIGQRWLSDTETELGLGVLIDVDERSVSILFPKSDETRVYARNNAPLSRIIFNVND EVQDQEGNKWNVESIEDRHGVLRYNVVRTLENGEQERKALNETRIGAQIQLSKPLDRLLA SQIDYKEWYDLRIEAMLMQAQMQTSPLRGLVGARVGLIPHQLYIAHEVGKRFAPRVLLAD EVGLGKTIEAGLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLQFSLFDLTRTAS IKEHDPELNPFLTEQCIIASVDLMVDHDDLREQALEAGFDLLVVDEAHHLMWSEEEGGND RYDLVEELAENTAGVLLLTATPEQLGVESHFARLRLLDPQRFSSLERFLDEEAQYQQTAQ IAEVLMSDEPLTQEHLSALEGLLGHSIEDQPEQRFRAIHELLDRHGTGRILFRNTREAIQ GFPGRDCQPAPLPAPADWSKDGKLREQMWPEEAQIDGSWMQNDPRVPWLMEILRKELKHK KVLLIARSGPVVESLESALRLHAGIRTAMFHEGMSLLERDQAAAYFAEESYGAQILLCSE IGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLMGTAQERMFRW YNEALNIFSNISPTAQTLQENFIVELKDCLLADQGQTFEDLLEEVNVQRQALEAELQAGR DRLLEYNSCRPIVAQEIVQALEDYDDNTTLPMFVKRFMSSTNIDFDEQSNGTVIIRPTDQ MQVQGLALDEEGMTATFYRDQAQMREDAQYLTLEHPFIESVMEMIRTQSFGSTNVAVLKS NALKQGSVLLEVWFKVDVVAPKSLNLPSSLPKQLIRVLLSENGQDLSEKIDPTILKPYLH HLDGNSCRQVVKARREVIEERYKQALDIAKEGLPQLQQQAKEHYGNKWQYEIDRLTYLKQ FNPSIRQDEIERLQKLQKEGLSLLDGLTVTPEAIQVLVVVKP >gi|333032526|gb|GL891900.1| GENE 65 79083 - 79721 203 212 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 9 209 83 279 287 82 31 8e-15 MSDFLSEHLIYRDDDFMVIHKPSDILSVPGKGDLHDSVLTRLVAIEPRTLLIHRLDRDTS GILVFGLSKRGQSAIARQFQDRQTSKIYEALVAGHLEGEGTVDIPVVYDPSRPPLHIVDA SHNKPALTHWQAIEHFQIQGQPVTRVKLTPITGRSHQLRVHMQYLGHPIVGDTLYAAPEQ LLVPRLCLHAKQLSFNHPVTGESLTFNCPVPF >gi|333032526|gb|GL891900.1| GENE 66 79854 - 80558 492 234 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000993 NR:ns ## KEGG: ABBFA_000993 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 233 1 233 234 400 100.0 1e-110 MFYPLPRKIQLAASTSNWPIESTQSILLLVGLDDLENISDWAHQPLADHLEILSKRAQAL EIPVMMIQSSQLQQAMLQLGQHLSSNTQAQVIMAGNLSPLFKQIMQLVLSITDYVAIVND AILASSLEQHIQWIEKISFDHIQHINTQTLMRLWSLSAPSLQVLSDKGILLAVAEQIGRH PMEIHPEIDLRNYGLDASGVNYLVELWRANGASLTVDELMQTPTLQHIMQLLKL >gi|333032526|gb|GL891900.1| GENE 67 80620 - 81918 1611 432 aa, chain - ## HITS:1 COG:PM0462 KEGG:ns NR:ns ## COG: PM0462 COG0001 # Protein_GI_number: 15602327 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Pasteurella multocida # 10 431 7 426 427 564 63.0 1e-160 MSLSPKQEQLFKQASKHIPGGVNSPVRAFNGVGGTPVFIEKAKGAYLWDVDGKRYVDYVG SWGPMILGHAHPDIIKAVQTAAEDGLSFGAPTVHETTLADIICEIMPSIELVRMTNSGTE ATMTAIRLARGYTGRDKIVKFEGCYHGHSDSLLVKAGSGLLTKGEGEPTSKGVPADFAKH TLTLPYNDVAALKECFAKFGHEIAGVIIEPVAGNMNMVKPIDGFLQAIRDVCDEYKSVFI IDEVMTGFRVALGGAQSVYNVKPDLTTLGKIIGAGLPVGAFGGKREIMECIAPLGGVYQA GTLSGNPLAMRAGIEMFKHLRQPDFYSKLSAQLEKLLAGLQAAADEAGIPFKTQQAGAMF GLYFTDQEDITSFDSMLACDIEAFKKFFHGMLKRGVNLAPSAFEAGFISSAHSDEDIEFT IQAAKETFAEMK >gi|333032526|gb|GL891900.1| GENE 68 81961 - 82572 851 203 aa, chain - ## HITS:1 COG:PA3976 KEGG:ns NR:ns ## COG: PA3976 COG0352 # Protein_GI_number: 15599171 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Pseudomonas aeruginosa # 1 202 3 206 209 142 41.0 3e-34 MRGLYLITNDDPIQLLLEKLDAALATRQIAILQYRRKKIDKAEQPAEVEQIKQLCEKYQV PFVINDDLKLAAQFGLGVHLGQSDGEITDAKSQLPEGVIIGRTCLNSLELAQKAIADGAT YVAFGAVYATATKPEAGNVGIEVIKQAAAQYDLPICAIGGLTVENSKPVIEAGADLCAVI SDILGRSTAEIPARVQAWAQLFS >gi|333032526|gb|GL891900.1| GENE 69 82689 - 83066 375 125 aa, chain - ## HITS:1 COG:PA3216 KEGG:ns NR:ns ## COG: PA3216 COG4323 # Protein_GI_number: 15598412 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 21 113 11 103 105 95 50.0 3e-20 MNAPVNFNHETQPEFELPIKNYQEFYRFYLTEHRNIMSRRLHAVGSSIGLYFFSKAIRKK QAKYALYGLVSGYACAWVGHFMFEKNKPASFKQPLYSFISDWRMLSDVATGRLSLIDRKH DKIPS >gi|333032526|gb|GL891900.1| GENE 70 83238 - 84701 1333 487 aa, chain + ## HITS:1 COG:mll9114 KEGG:ns NR:ns ## COG: mll9114 COG3025 # Protein_GI_number: 13488075 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 1 487 18 499 500 118 27.0 2e-26 MVEVELKFQLPESKKKTVQQYLKKHKAQYIHLQAKYYDTPDRLLAKNGMALRLRKENDLW VQTFKAAGQSHLHRVEEEVFLGKCDQEPDLNLELYKDNKAVTDLITQALGSEVEKLSLQF ETDVQRTYHVFEADDTAIEVCLDDGAVKTATAQSKICEVEFELKQGAVKTLIQFAQQWIN RYELWLDVRSKAERGNLLALGQAASPAVHAKKLNLDKNISAEQALKKIVENCLGQFLPNM AAIADGVAEAEHIHQARVSLRRLRSALKHFSAWSDELNPVWEEQIAELFRQLGDTRDEDA IRTEILPMIVQHGSPELLLPISEQPLKDLATLFKSADTIKLILALLAFAYSEEDDQNAKG KLKKYIGKSLDKLHHQVVSNADHFTELEVTEQHRTRKKAKQLRYCIEFISSLYPRKNVQQ FLKQLQPVQNTLGLYNDLFIAEDLFNKAVEHDPHFWFALGWVKAKQPYLQNQSAEALQKF KQAKTFW >gi|333032526|gb|GL891900.1| GENE 71 84737 - 85369 621 210 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02677 NR:ns ## KEGG: ACICU_02677 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 210 1 210 210 417 100.0 1e-115 MQDAIAVQSLKTDIALLRQHIFPPQYLEHVEGLPIYYGLQEEVVAYYQQWKDLIERAQEL FQPFMEDELPDAIHLPSHLNLPLFFFHVDRIRINKTRAKESKTFRGVASLIEKCGQFETD QIFTMQEWLQSDDTAALVAHREFIDLRTYVFQHGQSEYTRSRFYTNGIVLGVELHFKLVD ARDKPRKQRSDSYSDPLADNGVWKVFGKYR >gi|333032526|gb|GL891900.1| GENE 72 85473 - 85856 537 127 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000977 NR:ns ## KEGG: ABBFA_000977 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 127 1 127 127 227 100.0 1e-58 MSQKINATDITEEEALNAVFFERADEFIKQANDFCRPPKGQKPDPAELRGQVSAAMLFAT ARFNTWVAANNFKDGNEMRDAKDQVMSYLLQQFQMMLEDNFDEYCEQFDNYLRFRKNEDF HTHKHDH >gi|333032526|gb|GL891900.1| GENE 73 85914 - 88676 2937 920 aa, chain - ## HITS:1 COG:DR1598 KEGG:ns NR:ns ## COG: DR1598 COG0612 # Protein_GI_number: 15806606 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases # Organism: Deinococcus radiodurans # 23 914 72 950 951 308 26.0 2e-83 MFMQFKQLTLSLCIFGLSAASFAQTTLVKSKQNVEEYKLDNGFRVVLAPNDKENKIFINT IYLTGSLNDPQGKSGLAHLLEHLAFKGTQNVKGEEFQRRLDQYTLMTNASTDYYSTKYTN IVRPEKTALDQVLYLESERMDKLVLQEKFVPSEIEIVKREREVRMDQPFAVLMDQMWKSA YGNQYLGRLPIGDLPELKSIKMPELNQFYRSWYAPNNAVMVISGKFDKTDVLKTIDQYFS PIPARAVPKPVQVPVLDSTKLKNREFVVKKGSDLAKFHIYMDGKNTKIQPELAFAPMLYT MQPSGHLYQNMVETGVSTDVQASTWLDQDFNVVFLGAIYSPKNDPKKVESALLSGIEKGK PFTETELNRVKSLMKTQGELVNKDAVALGSRLSDYTVADGQWDQYFKDLDSIDKVKLNEV NQTLKQFLVAGHRIDGDILPTPEDQKKALQLDAKDKPKTLDQTDVKAEPLKDPKVYQQEV AEFLKTSKQYAESNEKKILRGKLKNGMKYALFPVETRDDRTYATITMDFGTEKSLFDKGT VVDLTSYLLLRGSDKYSLQDIADKSIDAGGAAYASADGNGMTINIQSKTEKFDEFFKFVL EVMKNPKFEQSQFDLIKSQSLSSLDRPYTEPDVVAGLTLSRLVEEYQPGDLRYHFEPELA KKQLKNVTQEQVKELYQHFFAMNHAQIAITGAFDTQKMKKLLNQEFGSWNSKQPYEKILI QHVDFPAQQVHVLSEQREFGSYQSVLALPVGKNHPDASALILMNYILGESQISSRLAQEL REKNALVYGFGTGLQLDRDTNVGALSISANYTAGRSAQVSASVHKVLNDLITHGITEQEL AAAKADIMKKRVTALEDERNIHGMLNLELESGKTLLDRVKHDQELTKLTVADVNAVIKKY IKPSNLVEVMADQYGQAQKQ >gi|333032526|gb|GL891900.1| GENE 74 88799 - 89614 892 271 aa, chain - ## HITS:1 COG:all1944 KEGG:ns NR:ns ## COG: all1944 COG0384 # Protein_GI_number: 17229436 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Nostoc sp. PCC 7120 # 2 245 4 239 273 194 44.0 1e-49 MKMYQVDAFTKELFRGNPAAVIIGKEWPNADLMQKIALENNLSETAFVKIIDSENYEIRW FTPTVEVDFCGHATLASAFVLFKDFTEKKTLNFHVRNLGLFVVHQDEDGKIRMDFPIRKA QQVEDYPAILRQALTKPFKAVYQNVQAYIVEYESVQDVLDEQPDMNLLKALGKRTAITTT AMDFAITSKADDQYDCVSRYFAPVAGIDEDPVTGSIHTAIAPLWAEKLAKNNIVAYQASS RGGVLYCNVLNQERIEISGYGKLYMQAEIFP >gi|333032526|gb|GL891900.1| GENE 75 89763 - 91157 1528 464 aa, chain - ## HITS:1 COG:YPO1716 KEGG:ns NR:ns ## COG: YPO1716 COG1823 # Protein_GI_number: 16121976 # Func_class: R General function prediction only # Function: Predicted Na+/dicarboxylate symporter # Organism: Yersinia pestis # 1 463 3 465 465 615 79.0 1e-176 MNIPLIINIVVFVGLIFLLAQTRKTDWSLSKKVLAGLILGVVFGLGLHLIYGGGHPILAE SISWFNIVGNGYVKLLQMVVMPLVFVSILGAVAKLHQASSLGKISFYTIGTLLFTTLIAA LVGVFVTNLFGLTAKGLVQGAAETARLTAIQTDYVGKVTDLSVPQFILSFIPSNPFAELT GANPTSIISVVIFAVFLGIAALNLMKDDAEKGQRILTAIQTLQSWVMKLVRLVMTLTPYG VFALMTKVVASSNVADILNLGGFLVASYLGLAIMFVVHAIILTLTGVSPLKFFKKVAPVL TFAFTSRSSAASIPLSIEAQTRRLGVPESIASFSASFGATIGQNGCAGLYPAMLAVMVAP TMGINTLDPMWIASLVGIVTLSSIGVAGVGGGATFAALIVLPAMGLPVTLVALLISIEPL IDMGRTALNVNGSMTAGVVTSQFMGQTDKAIMNSEDEIELTQHH >gi|333032526|gb|GL891900.1| GENE 76 91355 - 92236 552 293 aa, chain - ## HITS:1 COG:RSc0214 KEGG:ns NR:ns ## COG: RSc0214 COG0583 # Protein_GI_number: 17544933 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 3 269 6 271 288 165 37.0 7e-41 MLLKSLEFFLAVAESGSFSLAAQKMCTVQSNITSHVKKLEEELGVILLNRHNPVTLTNAG HQLHSYAVQMIALHNKAKTIFREGDIDPNETIRLGSMETTAAIRLPQLLNECMQQHPNLP LELQTHPTGYLLNAVQQGEVDCAFVASKYVIPELYSFPVWQEQLVLVCPKQQIDFPDIAT LAKTRFIAFRQGCSYRHAIELFLNDHSVPPSQIMEMGSLDGIVSCVELGVGFALLPKSYL NKVADKVSLSCFEINTESAHFTTYLVAQPPETWGSNLKQFICFIEQQFIQKCA >gi|333032526|gb|GL891900.1| GENE 77 92333 - 93511 752 392 aa, chain + ## HITS:1 COG:jhp0298 KEGG:ns NR:ns ## COG: jhp0298 COG0477 # Protein_GI_number: 15611367 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Helicobacter pylori J99 # 9 380 4 374 381 113 27.0 7e-25 MSTFYRMSLLVFLATCLGIGIFRFSYTALMPIMIVQYGWTHDFASYLGSANLLGYLVGAL LALFSIKEKSIPALIMTSAVLGSLSLLCCSFIHMSLAWFILWRTISGIAGGLLMILAPSF AMKNIAISQRLKVNFLGFSGIGAGVLSATLIIPALKNMPVQYVWEIFAVISIIGSLVLLQ LLRHPPTESVQTANHAPQNFIHSRLGLVIIIAYMCSAFAYIPHSLFWMDYLSGTLHFPLQ QRNLFWVLYGVGSCVGAFVAYCLSRLIGYLQAIKCLYGVYCLAVALPFFSHATALLTLSS FLTGLLTPATVFISSYSLLQIYEQRYQKIWSLATIGFASTQLLGGVVISTLHHLHWSYAH LFLMGGIVLLFALSLLIPIRSSPPNTLGETKS >gi|333032526|gb|GL891900.1| GENE 78 93508 - 93633 78 41 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKTLFFPLFLIIFVLIIQALDQSYQKKIGISKPQKHPEFMQ >gi|333032526|gb|GL891900.1| GENE 79 93859 - 94269 201 136 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02685 NR:ns ## KEGG: ACICU_02685 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 136 1 136 136 236 100.0 3e-61 MSNNNYIDELLKLLAMFAFIGVLLLAFKCQTIFALDMTTSYEVSVRIVIYILTAAILGFL TRNHIEFTTQFLIAVPFAYFWLEPILDYKAIQTIPDVPFYLSGHGQSLGLLIVIIFCFAL WVFKETSSNSLESQNV >gi|333032526|gb|GL891900.1| GENE 80 94378 - 94761 121 127 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0983 NR:ns ## KEGG: ABAYE0983 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 127 1 127 127 205 100.0 5e-52 MFNVSNPANAVVVGIIAIIATVSLLIWKFNFYLGIDIYTSGEVLFKTLLYAALIGLFSYY FRHTIKISNTVILSLPLFFFCIRPILNYKMTHTIGNVPLYATHHGQGLILLSLTILACIL WAYTANS >gi|333032526|gb|GL891900.1| GENE 81 94862 - 96118 1835 418 aa, chain - ## HITS:1 COG:PA2623 KEGG:ns NR:ns ## COG: PA2623 COG0538 # Protein_GI_number: 15597819 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Pseudomonas aeruginosa # 1 416 1 418 418 676 78.0 0 MGYQKIVVPADGDKITVKADLSLNVPNHPIIPFIEGDGIGVDITPAMKKVVDAAILKAYG GKRSIEWMEVYCGEKANKIYGTYMPEETFEALREFVVSIKGPLTTPVGGGIRSLNVALRQ ELDLYVCVRPVRWFQGVPSPVQHPELTDMVIFRENSEDIYAGIEWKADSEEAKKVIKFLQ EEMGVTKIRFPEGCGIGIKPVSKEGTQRLVRKAIQFAIDNDKPSVTLVHKGNIMKYTEGA FKEWGYELALDRFGGELIDGGPWVKIKNPKNGKDIIIKDVIADAFLQQILMRPADYSVIA TLNLNGDYISDALAAEVGGIGIAPGANIGGAIAVYEATHGTAPKYAGQDKVNPGSIILSA EMMLRDMGWTEAADLIIKGISGAIAAKTVTYDFERLMPGATLLRCSEFGDAIIQHMED >gi|333032526|gb|GL891900.1| GENE 82 96319 - 97107 950 262 aa, chain + ## HITS:1 COG:L189881 KEGG:ns NR:ns ## COG: L189881 COG1187 # Protein_GI_number: 15673334 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Lactococcus lactis # 3 180 9 184 185 201 56.0 1e-51 MKIVILNKPYDVLSQFRKDEAHMTVSDFVDDPTLRIAGRLDMDSEGLVFLTDHGGLNQFI TNPANKKYKTYLVQVDGDVTEEALEQLRKGVELNDGMTLPAKAIKVSEPEWLWDRDPPVR YRASIPTSWIEISICEGRNRQVRRMTSAVGFPTLRLIRTKIGTIDLVQLGLQPGETKEIE PLLYPDFKDVPAEQPYRSRSYVKKPGGTGGKPMVRKNKDGSAKKSGTKRIWQMDESEKPR RKTNGTTRPNTKAPRGRSRNSR >gi|333032526|gb|GL891900.1| GENE 83 97225 - 99462 2292 745 aa, chain - ## HITS:1 COG:MT0072 KEGG:ns NR:ns ## COG: MT0072 COG2838 # Protein_GI_number: 15839445 # Func_class: C Energy production and conversion # Function: Monomeric isocitrate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 745 1 745 745 1199 76.0 0 MAGEKSTIIYTLTDEAPLLATYSLLPIIETFTKPAGIEIVKSDISVAARVLAEFADYLSE EQKVSDNLAELGRLTQDPDTNIIKLPNISASVAQLTACIKELQSKGYAIPDYPENPATEE EKTIKARYGKCLGSAVNPVLREGNSDRRAPAAVKNYAKKHPHSMSEWKQWSQTHVSHMEE GDFYHGEKSMTLDRPRNVKMELITNSGKSIVLKPKVALQEGEIIDSMFMSKKALCDFYEK QLDDCREAGILFSLHVKATMMKVSHPIVFGHCVKIYYKEAFEKHGKLFDELGINVNNGMA GLYEKIETLPTSLREEIIEDLHACQEHRPALAMVDSAKGITNFHSPNDIIVDASMPAMIR AGGKMWGADGKQYDAKAVMPESTFARIYQEMINFCKWHGNFDPKTMGTVPNVGLMAQKAE EYGSHDKTFEIPEAGIANITDLDTGEVLLTQNVEEGDIWRMCQVKDAPIRDWVKLAVTRA RNSGMPAIFWLDPYRPHENELIKKVQKYLKDHDTTGLDIQIMSQVRAMRYTLERVVRGLD TISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEEN HLRWDSLGEFLALAVSLEEMGIKENNARAKLLAKTLDEATGKLLDNDKSPSRRTGELDNR GSHFYLSLYWAEALAAQNEDAELKAKFAPLAKALAENEQKIVAELAQVQGKPADIGGYYA VDPAKVSAVMRPSATFNAALSTVQA >gi|333032526|gb|GL891900.1| GENE 84 99863 - 101566 1823 567 aa, chain - ## HITS:1 COG:RSc2890 KEGG:ns NR:ns ## COG: RSc2890 COG3975 # Protein_GI_number: 17547609 # Func_class: R General function prediction only # Function: Predicted protease with the C-terminal PDZ domain # Organism: Ralstonia solanacearum # 2 565 4 603 621 378 40.0 1e-104 MLHYQIEFDDYKQHLVHVTIRFLANPNQELWLPTWIPGSYLIREFSKHIEAVKAYDEAGR MLNIKKTEKNRWRLFNTDHELITVEYDVYAYDLSVRGAYVDQTRLYINPACVCLGLEGQE QSACELEIFLPDELKHFQLATGLASKSLVKGRFTLKADHYDQLIDSPFELADQTRFSFET HGIEHEFVISGTHATNVDRLKTDIEKICAAEIDLFGSAPFKNYTFMTMATGNSYGGLEHC NSTSLITPRDDLPKSNEPTEPSKDYQRFLGLCSHEYFHSWLVKFIRPENFANYNLHQEGY TSLLWIFEGFTSYYDDLILLRSGVISQKSYLDLLKSQIDRYLQNPGRFVQTVAESSFDAW IKFYRQDENSNNAGTSYYNKGALVALCLDLGLRLRGSSLDALMRRLYENTQNGVQVNERT IFDLCEELTGDSWLEQINHLINTTEELPLDQLFPEFGLSYTLKNDKTLAYGLKLADKPEG VLVQNAHREGAGAKAGISANDVIIAIDGLKATTKLIEKYAKQKGNYSVLAFRRDELLSFE VTSDSINLTEVELIIEDQSKADKWLKA >gi|333032526|gb|GL891900.1| GENE 85 101739 - 103058 1130 439 aa, chain + ## HITS:1 COG:RSc0327 KEGG:ns NR:ns ## COG: RSc0327 COG1686 # Protein_GI_number: 17545046 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Ralstonia solanacearum # 31 317 39 325 397 213 42.0 5e-55 MKFFLSLFTLFSIFCTTLTNAALLNIASESVEAAAWTIVDTQSGQIIAEHNSHVQRAPAS LTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIV MSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLL SQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTKAAGYNLALTAS RPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIK STLKMFKVETKQPTIVTTSLYAEPTPIDLNTFDYATQRIQVLDSNQQPKVIAPLETTQTR VNIQLNEQKLTAPLMKAMNLATVSIYQNNQLIRSLQIENDVHIEEANIFQRIMMWFSSLF SIFSSSEHSAAKLYPIDSH >gi|333032526|gb|GL891900.1| GENE 86 103158 - 104444 1304 428 aa, chain + ## HITS:1 COG:YPO1617 KEGG:ns NR:ns ## COG: YPO1617 COG1252 # Protein_GI_number: 16121885 # Func_class: C Energy production and conversion # Function: NADH dehydrogenase, FAD-containing subunit # Organism: Yersinia pestis # 18 428 18 434 434 360 44.0 3e-99 MTQNLHHIVIVGGGAGGLELATQLGETFGKNGKAKITLVDQNLTHIWKPLLHEIAAGSLN PHEEQTNYFAHAKKHHYEFVLGTLTAVNKDKKIIDLIPPQVSKEQNTHIQQLSYDTLVLA LGSVSNDFNTPGVRENCHFLDSRKQADIFQQDLLHLYIEAQNQPDQRTLNIGIIGAGATG VELAAELIETTKNFYRYGLKKIHPNQVKITLIEASERILPALSEKTAEHSAKQLQKMGVE ILTKHRVEKIDEHCIYFSNGNQLNSDITVWAAGVKAPKVLESLSDFERDNINRLMVYATL QTYSDPNVFAFGDCAHCQLDARHPPLGPRAQVASQQASFLVDAMAARLNGRSQPMFTFND KGSLVSLSRNKAVGELLGDVSVQGYIAKTMYVSLYRLHQATIHGYTQAGLLTMKDLLTRR VRPKIKLY >gi|333032526|gb|GL891900.1| GENE 87 104559 - 105062 226 167 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90022209|ref|YP_528036.1| ribosomal protein S2 [Saccharophagus degradans 2-40] # 7 150 4 149 151 91 32 2e-17 MIEWIKNMTAIANNHVVSFHYKLTNAEGETLDQSQGEPLAYLHGAGNIIPGLENALTGKT VGDKFTVNVPAAEGYGEYNPDLVQEVPAQMFQGVDNIQPGMQFQAQTDDGVQIVTVKAVE GDNVIVDANFPLAGQDLTFEVEIVEIREASQEELDHGHVHGAGGHHH >gi|333032526|gb|GL891900.1| GENE 88 105166 - 106608 1252 480 aa, chain + ## HITS:1 COG:PA4660 KEGG:ns NR:ns ## COG: PA4660 COG0415 # Protein_GI_number: 15599855 # Func_class: L Replication, recombination and repair # Function: Deoxyribodipyrimidine photolyase # Organism: Pseudomonas aeruginosa # 7 480 8 474 481 466 47.0 1e-131 MSNAYQLIWFRQDLRIHDHAALWHASQQGPSLGLVILSPEQWKQHADAPIKISFYLRQLR TLQKELAALHIPLVIQVIPYWKEIANFISDFSKKYNIENVYANIEIGVNELKRDKNVQDY LNRHGKELFLFHDRTIFPLRSIRNQSQQPYQVFSAFKKACYTKLDTSGLSQCYPVPNKQN EVPLDFLQGKNIDLDEIEKLFCSSLSKEQQDLWPVGEQYALEQLDQFIEESVCHYKVERD FPHIQATSKLSPYLNIGILSIRQCLQALFRNQHGNFHLVNEGQQTWLDELLWREFYQHIL FDFPHVSKHIPFKKDTQKIKWNHNPEHLTAWQTGQTGIPIVDAGMRQLLQTGWMHNRVRM ITAMFLCKNLLIDWRIGEQWFMQHLIDGDLAANNGGWQWCASTGTDAVPYFRIFNPIAQS KKFDPEGEYIRQWIKELTHLDNKTIHDPYSSKTDLGLNYPKPIVDLKETRLKAIETFKNI >gi|333032526|gb|GL891900.1| GENE 89 106803 - 107543 550 246 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02695 NR:ns ## KEGG: ACICU_02695 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 246 1 246 246 438 100.0 1e-121 MQQKHPGRTLVLWIIAAHLFMGMVAYEWLPVSFRGSWIFILLLLISGAFLEVGLSLIVGL VAFIGVAVYFLLDLGAQTHIERQLLLLFIIPLIPLFLSAVRHNIEINVQKYRDIQSYDRN YRRDIFPLSALKYFQRSFFKLLDHHNVQDYEVFEIRILNRSLIKEMLGDDVWKTTQNEMI KILSQHEPNEIVFQFADDDLENIYSIMIRQQKTEEDPVFLKKLKEITTLRLEVEYKIVPL PPEEMS >gi|333032526|gb|GL891900.1| GENE 90 107543 - 108439 604 298 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02696 NR:ns ## KEGG: ACICU_02696 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 298 1 298 298 565 100.0 1e-160 MSNLLNICGIVIASSQYPDATLQQFYRQYYHCEIKAEQIKAEVQSPSDLSMFFPYQDTWW PVFTIDQISSESFQKFIHNGIRPGIILPDEVFGFPHYFLLKEAVSQGAIPIVLFKTEQPQ YFAAKATFSTAIGLRPMAAFVSTGWDENLISQPAGSYIIQLNSANLPLPSREVRQGQHFF YSAKGFNGHVSGYEIIINPPADLPLSNIRYPQLGISWNFNNIDYESTPEHVSTNLIGYIF IILSIVVVPLDLILTTTYPDLLGTFGSYISWISLVVGAILLLLLISSIIRRVRKNGSN >gi|333032526|gb|GL891900.1| GENE 91 108426 - 109676 1031 416 aa, chain + ## HITS:1 COG:lin0533 KEGG:ns NR:ns ## COG: lin0533 COG1215 # Protein_GI_number: 16799608 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Listeria innocua # 1 411 1 415 416 274 39.0 2e-73 MAPIDILFLFGFLGIWIPQAFWAWLSYQAWKYSKTAEKELQNLPIPERWPVLSVLIPAYN EGVVIEDTLHAIAQQDYPAKSYEVLLINDGSKDNTLEIAENLAKIYPCIKIVNVPKGMGG KGKSRTLNNGLPHAKGELIVVYDADSTPEPDCVRLLAQTLLADKKLVAVNGKVRTRNWQD SILTRFIAIEFIFFQWIFQGGRWQRFELSTLMGTNYVIWRDALETLGGFDEKSLVDDTEM SFRIFIGQKRIKWVPYAIGWQQDPPSLSVFVKQRSRWTQGNFYVTRKYLPVALRTPFPIG IEILNNIMCYILFVPALFWSHITLTLGLLDIAGISVPGPFTLLWGLSFCLYVAQMWFTLS LEKVKPELYFYSVLSYVSYSQIFLFIVFKAAFDMLKNKIQGNSLQWYKTERSKEKK >gi|333032526|gb|GL891900.1| GENE 92 109677 - 111521 1527 614 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02698 NR:ns ## KEGG: ACICU_02698 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 614 1 614 614 1178 100.0 0 MKKTFDLYQTAQVLLASTSFLLGMSTHAYTWKLDDISTSTKYTVEPHFFYIGKGAEWQNI QFSSDYSTENDTTVLVKYDDKLIYNTTLNGDGQFKFNIPASQSGFHRLDFIIQQYAKPTT LNQTKETFCTEDIDHLTYLSNSQLDFTPIRNEYRLKDLPDALFNPQARRPTPFVGILKYN RKEITEASMLGRLVSSWSSVTPIEWVDSGQTNLNPETNFIIEVIRSASPLKGGALVQIAK LAEGVPTLSITYHTPQELTAAINGLINPTYVQQLDTGSAIFPTTISAPAWAQFKKIDTLA DLGIQDFRLNHAEKNLFLDFPAVWQPTDILQGQIALRIQSGLLQGSNITAWIDGGLAGSM KTADLASDPVNRQFNIFAKEISNTTNFSLKLENSVIANSQCLPNAHGSLWVDTAKSTVKL PHKLKNGVAALSMTLATKPTIAIDDQSGALNIAIILGQVAKNMLLTQAPMPVNLVRFSPT SPQAVNVRVNKEIYQQQVLMHQNIIYAPAAANGFIVSYNNNRFDVITDSENGAQTFMHLW GKIQHKIPNNVTKMLVSENGNIYVLQKLIVGNQKAPLVQQSSFFLLVVIISAIMIIVIFL WYWLRRNNEKTDTN >gi|333032526|gb|GL891900.1| GENE 93 111499 - 112404 685 301 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0970 NR:ns ## KEGG: ABAYE0970 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 301 1 301 301 583 99.0 1e-165 MKKQIPIKITAFIILIICSVVGYAGLFKNHGQPPIIEGIFWQPDNDTTPPKGNWHYLGIN TFVPQWSVVESKSWWKNSNLPQWEKAIDLQKIKQQPWAKNLILGLAGEYNEHEARANVVA LGEKSAQIIQEQNDASLKGYYFPVEADPTWLRVSTLGHVLEKLPSPIWVSVYSGESEPEN YDLWVKSWLPQQAGVFFQDGVGVGVRTPEQARRILDQLEQTLGKDKTVIVLEAFRTKKNG QFRAAYPWEIISQIKAYEGKKIYIFDGPHYMGRWSVYIVGLWYRFVYGSTPATINGPENS K >gi|333032526|gb|GL891900.1| GENE 94 112412 - 113548 991 378 aa, chain - ## HITS:1 COG:VC0917 KEGG:ns NR:ns ## COG: VC0917 COG0381 # Protein_GI_number: 15640933 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Vibrio cholerae # 1 375 1 372 372 331 45.0 1e-90 MKKIFISIVFGTRPELIKLAPVILLAKQDSRFQVEVIFTGQHDELVRDAIDFFGVEIDHR LKIMNAGQSLNQLLIHGLTQLENIYTDSQKRDAIVIQGDTTTVLAAGLVAFSMKIPVAHV EAGLRSYDLDHPFPEEGNRQLVSRITKWHFAPTEQSKRNLLNEQIPPSLITVTGNTVVDA VYLGRKLIAEKTGLKNQLEPYGIELKQNDKVVLITAHRRENFGEGIQNICNAVEYLAKHH PDLHFIWPVHLNPAVHNVVHDKFKNHAQIHLVKPLDYPSLLAVIDRSTFILTDSGGLQEE SPSFNKPVLILRDTTERPEVVEVGAGVLVGTNQQKIIEEAEKLLTDSQHYQKMAHVENPF GDGCAAQRILDEIARTYN >gi|333032526|gb|GL891900.1| GENE 95 113551 - 114723 935 390 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0968 NR:ns ## KEGG: ABAYE0968 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 390 19 408 408 768 99.0 0 MGAVISSLGMIGISSVYAQEQVDPAYKPGNPIYDKWDRFYKIEQSQPQEAEKILVELSKL TPTDIKVWKSLTYLQIRLEKRVEALQSLRQARNLAPQDDTLKLQEAYLLNQQKKDREALV LFKELSSSSDPEIAAKASQAVKNLSGGEVKPYFRDIYFAPSYESRYDDVIFPLKMRYGKN IDNGRAQVYGFLNLNRDTQSQGGVRPEIIDENAATLGVGANYQPWTSIPVRAYVEVGGSY DLIDRNRKRFRESVVGGVTGYQEWYSQSNCDHSLCLDNYFTDLYGNVATYSREDYNVIGD LRLRTGLNLYKGESGSVQAYVKLHGLADSEDEYYNNLFEYGPGISWQPFNYQPIKLRVER LYGNYFKDVPVNTKDHYNNTRVELVFYKDF >gi|333032526|gb|GL891900.1| GENE 96 115024 - 115725 897 233 aa, chain + ## HITS:1 COG:CC0717 KEGG:ns NR:ns ## COG: CC0717 COG1814 # Protein_GI_number: 16124970 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Caulobacter vibrioides # 6 228 7 229 233 193 50.0 2e-49 MAFPHHTEHHAIQRSGWLRASVLGANDGIISVTSLIMGMAASGASSHTLFITCIAGLISG ATSMAAGEYISVKSQEDIEKSDLAIEAKELKKYPQKELDELTQIYISRGLSKELAKEVAI QLTTHDALGAHARDEIGIHENTAAKPIQAALSSAASFSFGAFFPMLAILFSPEHLIMPSV LITGIAALAILGALSSYFAGTSKIKGSLRITLWGILAMAFSSWIGSLFNVTPL >gi|333032526|gb|GL891900.1| GENE 97 115836 - 116882 1064 348 aa, chain + ## HITS:1 COG:PA4202 KEGG:ns NR:ns ## COG: PA4202 COG2070 # Protein_GI_number: 15599397 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Pseudomonas aeruginosa # 7 344 9 349 351 281 47.0 2e-75 MSLLQQLAIKHPIFLAPMAGVSTPELAAEVSNQGGLGSLGLGANTPQSAREQILKTQALT ENPFQVNFFCHQSTELNVEKAKQWLDYLRPHFEKFGAQPPQELHCIYPSFLDNDDFLNVV LETKPKAVSFHFGIPHPHQIKALKEAGILTMVSATNLIEAQAIEAAGIDIIIAQGIEAGG HRGIFNQTFDGAIKTSDLVQLIVQHCTLPVVAAGGIMTGLQAKHMLGLGAAAVQLGTAFV QCQTSNASAEYRKALFSKPVTQISASLSGRPARGILNHWHTKIDSPTRPVQPEYPYTYDL AKQLNAIASKHQDYGFGAFWAGSNVAQIRELEAPDLVNQLVVEMLDSE >gi|333032526|gb|GL891900.1| GENE 98 116926 - 117945 808 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145640649|ref|ZP_01796232.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae R3021] # 6 319 35 348 353 315 51 6e-85 MFDKSIDKKLWVAPMAGVTDRPFRTLCKYFGAGHAVSEMMTADKTLRMTKKSLYRANFDG ELAPISAQIAGSDPEQLAEAARYQVANGAQIVDINMGCPAKKVCNKLAGSALLQDEDLVA RILDAVVAAVDVPVTLKTRLGFLNGQENILRVAKRAEEAGIAALALHGRTREDMYLNTAR YELIKHVKELIHIPVIANGDIDSPEKAKYVLDYTGADAIMIGRAAQGRPWIFREIAHYLK TGEHLAAPNIEEVKEVLLGHLSELYQFYGEYSGCRIARKHIAWYTKGLRSSNEFRQNMYK VETTAEQALVVESYFNQLLAEGNLMSDVQVEQVNLLDTH >gi|333032526|gb|GL891900.1| GENE 99 118076 - 119680 947 534 aa, chain + ## HITS:1 COG:RSc1554 KEGG:ns NR:ns ## COG: RSc1554 COG0582 # Protein_GI_number: 17546273 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 1 364 1 345 354 80 26.0 7e-15 MGTVTKRQLKNGTVRYRAQVRVQREGYPPYKASKTFSKKSLADEWIKRTEAEIELNPEKM LNPDAELKHKTLAEFITQYLDEADNFAESKTSALKFIASLEISEKNIYSLTRQDFSDFAI WRRKGDPITGRDGVAPSTALKDLSHIKAVLVHAQFVWGEPLENVISEFEKALIGLTKARI VTKSKLRDRLPTDEELQALTTFFYKTWKRKKKSVPMHLIMWFAIYSGRREDEMCTLRLTD FDRANSQWLVRDAKHPDGSEGNHKYAHFEPKAIELANKFLEHDTRKRILELGYSDQLLIP VNSRTVSVYFTRACNALEIEDLRFHDLRHEAATRYAEDGFSIPKLQTITLHESWNTLKRY VNLKKRGRRLDFAEAMSVAEADYNNHYKEWNKKQRVISEIDTFEAFEVSENLEIDVPYNF IKTQLEKFIETHKQSKYFIRKHVKKLNTPFPFAWNKEKQEFYITEIQIAWEDWFVEHGEV DWSELPPEASHFSFKKNKVIRLFKNRVLEFEHELKAWLDISDNYYFDENYHIEK >gi|333032526|gb|GL891900.1| GENE 100 119683 - 119874 120 63 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02706 NR:ns ## KEGG: ACICU_02706 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 63 1 63 63 109 100.0 4e-23 MTSELIKIYNHADSRIADLLAEIDKKGEVTKIYDLNGNELKINFLRDEVYYNKAWWHFQK KQK >gi|333032526|gb|GL891900.1| GENE 101 119936 - 120526 248 196 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02708 NR:ns ## KEGG: ACICU_02708 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 68 196 1 129 129 253 100.0 3e-66 MIDQKEEMAPLFALAYMSLIDEDRLNRWVKASFALGKVEPFFISTFQSLGRLDSRLVFFD KIIIKNLMKGDKGDLDFNAYTIEHLSQATLWLFGAYEIIRVLNDKDFKKKPEMAIYNKYQ PEIYSLKLKLARIRMPLAKFAPADKHKGDAHVPTPTFNITHGVAWQITETEWIIRKELSD EMLELLEKIFKETKTE >gi|333032526|gb|GL891900.1| GENE 102 120933 - 121103 237 56 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02709 NR:ns ## KEGG: ACICU_02709 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 56 1 56 56 78 100.0 8e-14 MSPEEAFIETLADEEREKYLSLTTVLERLSFTVDIAENRIKKQSNAIQQLNKSLNA >gi|333032526|gb|GL891900.1| GENE 103 121124 - 121354 195 76 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02710 NR:ns ## KEGG: ACICU_02710 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 1 76 76 130 100.0 2e-29 MGFLSKLFGTKKEPTPTPSDQQLICRVGPNATATAVTSLQTTLPPNYKAVTYESPFRKGA LNVMFVKVENETNKQD >gi|333032526|gb|GL891900.1| GENE 104 121526 - 121843 186 105 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02711 NR:ns ## KEGG: ACICU_02711 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 105 1 105 105 219 100.0 4e-56 MTQAEKVTELTPYLEYWSSGIYMFKCPGCKYLHPFHVKEGAHHNGSTWGFNGDINKPTFT PSLLVNDHCPASRCHLFLTDGKIQFLSDCHHELAGQTVDMVPIDV >gi|333032526|gb|GL891900.1| GENE 105 121844 - 122389 641 181 aa, chain - ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 7 179 5 176 177 164 48.0 7e-41 MNIEQYLEELIKREGGYVNNPADRGGATKYGITQAVARENGWNGNMKDLPLEFAKSIYKK QYWLEPRFDQVNALSPSVAEELLDTGVNCGPNFAKPLLQRALNLLNNQGKAGWPDLKVDG VYGSATLGALKTYLSKRGKDGEKVLVRVLNIMQGQRYIEICEHNPKQEQFFYGWISNRVV I >gi|333032526|gb|GL891900.1| GENE 106 122448 - 122672 264 74 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02713 NR:ns ## KEGG: ACICU_02713 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 74 1 74 74 126 100.0 3e-28 MTSEQTRAYLAFALVALMFVLVIALFFVNMPRENSNLINTALGFIAGAMTTACGFYFGSS DQEKKNKTEESTEQ >gi|333032526|gb|GL891900.1| GENE 107 122653 - 122946 272 97 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02714 NR:ns ## KEGG: ACICU_02714 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 97 1 97 97 158 100.0 6e-38 MNDQTNSVVGAAASTAAATATKFTYGYVVGGSLIGVIGKIDWAVVFSILIGIATFLTNLY FKKRDDKRKDEIHELQTKQYELTKKRLEGGSDDKRTD >gi|333032526|gb|GL891900.1| GENE 108 123015 - 123740 470 241 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02715 NR:ns ## KEGG: ACICU_02715 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 241 1 241 241 439 100.0 1e-122 MDNYFLVKNDFINAIDDDYFNLAFIRKQRFNFTSEPGITYYYRTFEVDITGIDFPVIAIS CVCPSAYLSMKANTLSIVCSASNYDGVANSVSNLNNSSKYLDVFVFGRLPRSSIPEHGIG VVCLDASSKVVYYSGAEYLKPIKMFIDPNTYRPMFNSNYNTQVEYLPIGKSYACIPLNRV NTVYSEWTPEGQDVIAMSSVCAIEGNTITYTSNQVQVAQDISAVYNGYCRHMYMLIDVSN Y >gi|333032526|gb|GL891900.1| GENE 109 123740 - 124063 255 107 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02716 NR:ns ## KEGG: ACICU_02716 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 107 1 107 107 192 100.0 3e-48 MPTGMIINSESGEVVFDGTVKIPKILGKVLIENGQTSAVLNLNKPLDGTMFFIPKGLATT VDPIYAPLGINYEVSLSSNKQVVTVKYIATSEQPKAGTDFEVYIGEY >gi|333032526|gb|GL891900.1| GENE 110 124064 - 128923 3269 1619 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02717 NR:ns ## KEGG: ACICU_02717 # Name: not_defined # Def: Phage-related protein, tail component # Organism: A.baumannii_ACICU # Pathway: not_defined # 546 1619 2690 3702 3702 1161 69.0 0 MTSLQGRVSTVEGGLSSKADASALSNYYTKTEADAATSSAINSFNSQLTIGGVNAVANSK APRTSTAATNREYLLYERSAELKAFYDENLEKPITISFEMSVPVAGPVQVYSSNGSAHQF VTSVNAIIVNQFAKYSVTVSPKAHTASTTVSTIEFYGTYGTGRIPTIRKLQIEAGTKATA WSPSPRDTKAAIDANASAIQTTQTKVDNIDGRLTTATDSITSLNSRMSTAEGNINSTNTA VGGLSTRMATAEGKITNQSDSIASLQNSVTSINGTLANKADSSAVNNLTSRVETAEGKIS SQSGQITSLSNSLDLTNSNLNDVNVLARLLSLGKPLRDDPTFKLGMGGLAPYALQSGSTL TRQAVSADNPTESTYEVLLRATTTLGSGWYPNNPTVLGGPNKAFLVKQVIKMPTGQRVYP YNNPLGTGGFVRMLGNAEGTGKFETYYSIIQCGPDASKSIQGHFRVINSTNPPVPTTSNP VDVILASYEVFDVTAVNDTIPKAYSDAISANANAINSLSNSVTQQGNTITSHSNSITSLN NSITSINSSLTNKADASALNNLSNRVTAAEGNITSQGNSITSLNNTLTNNDLSNLVLNPD FIDPKNGWTSGVIVDATDAAPNPPSLKALKLNNRDSYYGPFVKCNVGDMFYVSAWFATPN TSATASAVIGFNTRNSAGTYTWYTVAVKSTDKNAWGFVEGYFTVPAGMVDIRPWLQVSIA ASEAAGQQWHVTNIQVRNITGNKKLATDLQATSSALSTLDSKVTNIDGRVTSASNSIVSL NNSVTNINTALSQKADAAALNSLSNRVTTAEGNITSQGNSITSLTNSLAVSGKGGTNLLI KSNVVGTYDGISYPHHTYKLGEDWEIGATYTLIWCAEHKRGTGDTNSSLAVYEGGGSQHL QAVVNTNGKVVSKVTFVKNSAVASGPIIHFYMLNRPTADKGSVGTVYWAVLVKGDVLTTD AWIPSAYDYIPDSNANASAITNLTNTVTQQGNTLTSHTNSITSLNNSITSINGVLNTKAN TSAVSDLDSRVTDAEGKITANTSSITSLTANLKSTSNGITMSASIDVDPDSEWIYWTKNG EVVRADDTSALGGKVYRFGNNAGNDHVNARSKAKLPFDQNKTYRIRARYRRVSGTGTIYC AVFGIAKDGVSHVNSSNTVTTDAGSSNYFVTNQAPALNAWQEVTVYVKGRAAGAATGGWT LDNPRQLPNATAFISVQFLANYSSAAGEVDLDYLIIEDADAIAANDATAKALSSLDTRVT TAEGKITSQGNSITQLNNSITTINGTLSTKADSSALTNLANRVTTAENSITSQGSSITSL NSSVTGILKDIEVTDTRSTNQPPSWYWSNYPKRIVREFKQASTIGLSGMGTYVSLETYVY YSDATGGPIIQIARGTDSKLTAERRSTSTSTWGTWVQDIKAISDGLANKAEASALSSLDS KVSVIDGKVSTQASSITTLQTTVGGNTASIQSQQQSIDGLKARATLKLQSGNLVGGVGIE NDSKTVDFIIQANKFAIGAPSDVTSAVTPKYAFTYQSTPTTLPNGTVIPAGLYLDSASIS YINANKIYADSLSAISANLGTFTSLADQSKPNGARTVISGERIEVYDENNVMRVRIGRW >gi|333032526|gb|GL891900.1| GENE 111 129031 - 134118 3329 1695 aa, chain - ## HITS:1 COG:PA0641 KEGG:ns NR:ns ## COG: PA0641 COG4733 # Protein_GI_number: 15595838 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Pseudomonas aeruginosa # 4 1093 5 1089 1204 782 42.0 0 MAIVKGAKKGKGEARKPVVAPDSAQSKTYIKILYGLGEGEIEGLANGNQSIFLEGTPLQD ANGNLNYSNVKLDFRKGTNDQDYIEGFPSVESETAVDVELKSGAPWVRAFNNIDLDAVRI RLKWGPLRQQDSSTGDVSGITIEYAIDIQTDGGAWTEVLKTKISDKTSANYERAHRIDLP KADSGWLIRVRRITPNSTSEFVSDKMYVEAFTEVVDAKLRYPNTALLGLQYDAETFGNVA KLAVDLKGRLLLVPTNYNPQTRQYTGIWDGTFKRAYTNNPAWIYYDLCTNDRYGLGNRLT PFMIDKWSLYRLAQYCDQSVSDGLGGQEPRFTCNVYIQNAEDAFSILMKLAGVFRAIAFW DGTSIICDADIPQDTYFTYTRANVVGGVFEYSGTRARDRHNVVKVAWDNPANHYKTEYEF VRDENAIAESGQVRILELDAWGCTSRGQAQRAGHWALKSEQKETRTVSFKVGLDGHIPLP GRVIEIADELFAGRANGGRVSKISADLKSITIDRDDVIAKAGDRLVINGENGKAQTRIVQ SISGRVITVTLPFDENSIAVQNVWVLDAQDLATMKFRVISISQEEKHQFSITALQYNPQK FDEIDNGAFFEDAPISIINPSIQEPVKDVLITTESRVDQGINITTMIVSWMQAKGAVKYL VEWRKDDGSWIRLPQTGNNSVEVPGVYSGQYQARVTAISAFEIASLPVTSSLTEITGKQG LPPKIAFIRATGILFGMKLDWGFPPTGAKDTAYTEIEVSPDGINNIAQLGLFAYPTTTTT IQGLQPNLRQFYRGRLIDRIGNVGPWSEWVNGTTTADPEAVLDLISGHINESDLAQELQG KIENSVDVSEAAQAAANNAQAVASSAQTAANNAQAVASEAKTAASSAQSAATTAQTQASS AQKIANDASVIATNAKNTADQAAEDASSAITAAAEAKTTATNANTTATNAQTTANNASSA ASKVASDLTTSTNQLNKKIADETDARTAAISKLNDGLTTETSQRKSEDAALLNNIETYKS STNGTLSSLQTQINTNATNTSANTSKITSLDSRLTTNEGKTADAINAAATAQQVANTAVT NAAAAASAVTSLKSELSTGKGINNIIAPFSDPQELSPYIIGASRTVALVNSPMRINGKAY DVTFNAVAGSIYFGSSSVSTVNTAAAGVVSGGKRYMLSAYLKNIDPTKQAEVYFTLHWFK RTSEGAYSATQTVLINQATNTTRVTPSNEGGTVSCKAVAAPPDAVAFVVICSGNSVYNVA GSRILIDMLMLEEVVGVDVPASTWTAGPADLSAIKSALDANASAISNLKTRVTNAEGVIT SQGNSITQLNNSVTSINSELTKKADATTLNALTNRVSTAEGTITSQGNSITSLRNDLNAT NDKVASKADSSALNSLDSKVSEIDGRVTSNTSAVTALQGRVTTVENGLLTKADASALNNY YTKTEADSATSGAIDKFNSQLTIGGVNVVANSEAPRTSTAATNREYLLYERSAELKAFYD ENLEKPITISFEMSVPVAGPVQVYSSNGSAHQFVTSVNAVIVNQFAKYSVTVSPKAHTAS TTVSTIEFYGTYGTGRIPTIRKLQIEAGTKATAWSPSPRDTKAAIDANASAISKIDTRVT NAEGTITSQGNSITQLNNSVTSINGELTKKADATALNALTNRVSTAEGIITSQGNSITSL RNDGGGVQLRLYVMI >gi|333032526|gb|GL891900.1| GENE 112 134185 - 134856 798 223 aa, chain - ## HITS:1 COG:PA0640 KEGG:ns NR:ns ## COG: PA0640 COG4723 # Protein_GI_number: 15595837 # Func_class: S Function unknown # Function: Phage-related protein, tail component # Organism: Pseudomonas aeruginosa # 2 223 9 200 200 130 41.0 3e-30 MLKTIKLYGVLGQKFGREFKLDVLNTREAMRALAVQVEGFEQFMLKAHEQGLQFAVFLKS KNSSKKRGKKSPSIYDHESKRLITGDNISEDQLDMTTQAEVIHVVPRVVGAGGGGGLQTI IGAVMVVVGVVVGVFAGWTGVGAVVAQGLIGAGIGMMLGGVAMMLMPKVDNTQDQNQDGN RANQGFGGAVTTVAQGNPVPVLYGQREVGGFIVSAGQYPEDQM >gi|333032526|gb|GL891900.1| GENE 113 134840 - 135595 454 251 aa, chain - ## HITS:1 COG:PA0639_1 KEGG:ns NR:ns ## COG: PA0639_1 COG1310 # Protein_GI_number: 15595836 # Func_class: R General function prediction only # Function: Predicted metal-dependent protease of the PAD1/JAB1 superfamily # Organism: Pseudomonas aeruginosa # 1 120 1 125 126 113 47.0 3e-25 MKLTAKIKKAVMAHADECYPHECCGVIVDKEYIPCRNVANKSDQFEIHPEDLAFAEDQGE ILAYVHSHPDGTTRASELDLIQIELHQKPWVICSYPDLDFQIYEPCGYRAPLVGRNYFHG WQDCYALIRDFYSRELGVELMDFERKDAWWEDKDHPSLYLENYEKAGFYEVDTPQYGDML VCRVGRTEHPNHAVVWLGDNGQLKSEQTEQCIGSSLILHHPYNRKSVREIYGQQWQERTV KILRHRDVKNH >gi|333032526|gb|GL891900.1| GENE 114 135602 - 136300 310 232 aa, chain - ## HITS:1 COG:PA0638 KEGG:ns NR:ns ## COG: PA0638 COG4672 # Protein_GI_number: 15595835 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Pseudomonas aeruginosa # 1 232 1 229 231 263 53.0 2e-70 MTLQSDFQKLEPGGLIHLYELDASSYGVGILRFHGHQQMESIFWQGQEFEAISLDVSGLE MRSDGKASAPTLTIANNLNGIQGAISAYCLQCKDFVGAKLKVITTLTKYLDAKNFPEGNP TASNESKEQIWYIEQKTSENAQQVTFELSNPIDFEGLRIPVRQITSLCHWCTMGKYRGEE CGYTGAAMFTEKDEPTDNPALDRCGGRLRSCRLRFGENKPLPFGGFPASSLV >gi|333032526|gb|GL891900.1| GENE 115 136310 - 136660 421 116 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02721 NR:ns ## KEGG: ACICU_02721 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 116 1 116 116 211 100.0 1e-53 MAIKTLDLAEAYIVGELRTQLLDARSFGNNLPAGRIETLAINYDRPSDSVNIAVTPGGGL NGSMTLLDADITKWAIQTILNTAYLYQVDVNTLSLKYDLAAKKITIEYTPVVSGQA >gi|333032526|gb|GL891900.1| GENE 116 136715 - 137056 393 113 aa, chain - ## HITS:1 COG:RSc1691 KEGG:ns NR:ns ## COG: RSc1691 COG4718 # Protein_GI_number: 17546410 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Ralstonia solanacearum # 20 113 19 112 112 90 43.0 8e-19 MSDLKFTFECDLEGNNQTQRFNTLSTKFGDGYEQNTSIGINNRSGEWTYQRTAKKAEILE IKAFFDKHKGANSFLWDSPLDGEVRVKAGDYQPVCLGGDTWRITTTFTQVFYP >gi|333032526|gb|GL891900.1| GENE 117 137174 - 141139 3584 1321 aa, chain - ## HITS:1 COG:Z1913 KEGG:ns NR:ns ## COG: Z1913 COG5281 # Protein_GI_number: 15801373 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Escherichia coli O157:H7 EDL933 # 50 536 70 523 1026 121 26.0 8e-27 MTQESRLVITIDSKNAERNARNLGNELDSIEKKGDFASKSMDSLSVATRALAGHMAGLVT VGAAISKMDEYTGLQNRLKLVTKNQVELNKATEDTFRIAQKTYATWNSVLQVYQRFSDNA KTLNINMDETARLTETVSKAVAISGASAQAADAALVQFGQALASGTLRGEELNSVMEQTP ALAKAIAQGMGITVGQLRSVAAEGKITSKEIVKALKNVQDDVDALFAKTDITIGQSLTLL NNEITKFVGESGKGSGAAHVLADSIQLLASNLKLISDGALVLGIGLVTKAIATKTVAVYA DVAATAANVKASKEKVIADAAEAAAAVKTAQAQIANSQATLQVLAAEKALEVERLKAQMN AVGRTQSITRMAELKKIEAQVTRELAAAETALAAAQTKANATKVTALTTLGRLGKGALGL VGGPIGALALGVSALAATYTYFKDKAEEANKKLEEQAAVANRSATELKNLQGQAKTDAIK DLTTAFKAQNDELTKMEYRVGSALIDIQNYAQGNAEVARISNEARLGTISYQEALQQLAK VKLPPSLRQALEEQIEKYKDAYDKADKTKTAIKLFGIEVTISGNKAQNAAIEQQKHADAI KNTKQAADEAQKSLKEMYDQKNLDTDFLTINIKSHGLEMGKALSDFYDNNKIPKTRSLTK DEWAIFQKNFDKVQELKKLEEDITASKRQQTKELEKQQKVLAVNSQVKSNASKYNFSDLE SKYDLLPGLLSAINMQESRGDANVIGPNTKYGKAKGGFQMLDGTAKRWGLVGKEVFDTGK AAEAAAKYLNFLFKKFGNWDQAISAYHAGEGNVEKGTNIGPVNRQYVKNVKGYIAGSNGF DMKGVSEKDFDSYLNQFLKTQEETEKLRDQYRDKDTLAEKEYLKRIGELKLHFKDAELKQ LTDKETARYNAQKELNAEQLEFELNEFRLNEVQKLEKQKQIKLLQIKASTEYSETEKEIR IKAVNAMFDYEISEYRKLQKQKLEEYRKTMYEQASIPQSDVINLLAKKNLTSSQYDSWNL QNQYSDEMQNANDAYSSNVKAISEDKTIVDEEKRFQALLDAEELFRQQKYAINEKYTLME QELQKNARQAEMEVYGQLLSQASTVWGNMTAMVKESAGEQSSAYKAMFFVQQGIAIAQGI ISTELAAAKALELGPVLGIPAAAVVRGLGYASVGLIAAQTIAGFSDGGYTGNGLKHTPAG IVHKGEVVWSQEDIKRWGGVSVVESMRQSNPSGYANGGYVSNNQSDAIAIRRESRQFEAI NSNQSQLNTNEKPINVYVTVNADGTSKTETENDSKQLGQMIGNAVRTIIRQEQRQGGLLS K >gi|333032526|gb|GL891900.1| GENE 118 141200 - 141601 335 133 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02724 NR:ns ## KEGG: ACICU_02724 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 133 1 133 133 256 100.0 2e-67 MKKIILLGLASILGGCAATTDMMNNQYMSVIPTTTDLSGFWSGNNGPYAVTYSFNKDGTG LMCSSWNGKDSLEKLKIHGDEIILQSGLKQTIKSKTETKLELNVKYYGGGSYQYSPDPKL INASPYCEKALRN >gi|333032526|gb|GL891900.1| GENE 119 141682 - 142086 512 134 aa, chain - ## HITS:1 COG:YPO1817 KEGG:ns NR:ns ## COG: YPO1817 COG1598 # Protein_GI_number: 16122069 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 2 133 3 136 139 76 37.0 1e-14 MLYPIAIERGTDTEAFGVSVPDIPGCFSAGDTLYEAIENVKEAISGHLEILAEDGEEIPL ASDVSKFIDQEDYRGMIWAVTEVDVSRYLGKPEKINVTLPSRLIRKIDDNVGKDKRFKTR SAFLAAGAEKLLHA >gi|333032526|gb|GL891900.1| GENE 120 142663 - 143196 522 177 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02727 NR:ns ## KEGG: ACICU_02727 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 177 1 177 177 315 100.0 7e-85 MALKVSIQTSKTVSKWRKYIDGEGNVLAEFKVRGISYKPYQVALERANNQIASKGYDVTK ASKDDKLYHELLLEAAACHLIEDWKGVVFEEVTENQELIVSEPEYSQENAIKLLNLGDLG VAIWLFVRQEAENIQKEADAYKDEVVGKSLTSTTGPSSTQKKKRATTTRNKQQLQKP >gi|333032526|gb|GL891900.1| GENE 121 143241 - 144170 924 309 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02728 NR:ns ## KEGG: ACICU_02728 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 308 1 308 309 575 100.0 1e-163 MSSGARQITQIAKETTVGTTPSPFARTTFEFTENGLDATVTKEDSNSITSGRIARSSMIT GAEYAGELKCEAKYSSLVQDLMAAAAFNNWSSNVLTFGGTLRQTFSVLRGFEDVNDYHVF RGCHVNTFGIDIPEAGLITMTFGLMALGRTNFSSAPAGTITAADNNPKMSNVSVGDILID GVSQAGISCLTAFTFNWDNTMQLQRCLGGGIDARAILEMLATGTGSFTAAWSRNTSDMYE KQFTNKTISLKVPITDTDGNKYEIFIPKAEITAPLPSGGNSDLLNASFEYKVVEVAPTIT RTPAAVPAS >gi|333032526|gb|GL891900.1| GENE 122 144278 - 144490 238 70 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02729 NR:ns ## KEGG: ACICU_02729 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 70 1 70 70 118 100.0 8e-26 MSYMLTLEEIEIKKQELERHLADVMAKELSKWQLSNKLCISDVKIRLANVNSINGPNLNI VTGVSVDLDD >gi|333032526|gb|GL891900.1| GENE 123 144492 - 144890 198 132 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02730 NR:ns ## KEGG: ACICU_02730 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 132 1 132 132 280 100.0 2e-74 MPMTLEQARQAIVDRMMAFTGISQERIHYPNAPGFLAPAKGLWCRLTIKWGPSFIAGLAD TPCTRRTGNILIQCFARPDTGDQAITILSVALLSHFEYFRIGHLECFQGQTIDAGKDADF LQYNVTIGFTVN >gi|333032526|gb|GL891900.1| GENE 124 144892 - 145260 336 122 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02731 NR:ns ## KEGG: ACICU_02731 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 122 1 122 122 231 100.0 6e-60 MGWKGKKPTSFSVDVVKNAEEQVKKITMDTVQSLVVSSPVDTGAYRASHIVSIGTADYGV REPSTNPVQDAAVQAVKFKLGNLIFIQNNKAYGPRLENGWSDQAPLGIYSTTFTYITQKY GG >gi|333032526|gb|GL891900.1| GENE 125 145232 - 145636 383 134 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02732 NR:ns ## KEGG: ACICU_02732 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 134 1 134 134 238 99.0 5e-62 MVNTEYVQEWYITPFQHVQYTLARNQLHMDLLFEDMDEADQFLDMGADAQVSTFSDGAYA IVQIGDTADKDKIQVYGLLLHEAVHVWQIVKKRMGESEPSVEFEAYSIQAIAQDLFEMYE ASEVSNGMEGEKAD >gi|333032526|gb|GL891900.1| GENE 126 145645 - 146013 298 122 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02733 NR:ns ## KEGG: ACICU_02733 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 122 16 137 137 243 100.0 1e-63 MGLRDEIQADIAEAFNEDLADAVQTFTCDRVVSTNWNPKTNTSENVIEHYEGRGVLFGSY NQYEIQTLGVLATDKKATVLQNEVTKEPMIDDEWSTAQGTYRIMHIKQDPISASWKCQLR KV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:11:21 2011 Seq name: gi|333032525|gb|GL891901.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld196, whole genome shotgun sequence Length of sequence - 2654 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 21/0.000 + CDS 8 - 337 415 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 2 1 Op 2 . + CDS 356 - 580 327 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit + Prom 689 - 748 80.4 3 2 Op 1 . + CDS 773 - 1105 343 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 4 2 Op 2 . + CDS 1129 - 1308 229 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 5 2 Op 3 . + CDS 1292 - 1510 70 ## + Prom 1543 - 1602 1.9 6 3 Op 1 6/0.000 + CDS 1728 - 2195 543 ## COG0183 Acetyl-CoA acetyltransferase 7 3 Op 2 . + CDS 2174 - 2654 492 ## COG0183 Acetyl-CoA acetyltransferase Predicted protein(s) >gi|333032525|gb|GL891901.1| GENE 1 8 - 337 415 109 aa, chain + ## HITS:1 COG:RSc2254 KEGG:ns NR:ns ## COG: RSc2254 COG1788 # Protein_GI_number: 17546973 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Ralstonia solanacearum # 2 108 116 222 229 157 70.0 4e-39 MGLGAVFTPTGFGTLLAEGKETRHIDGKDYVLEYPIKADFALIKAYKGDRWGNLVYRKSA RNFGPIMAMAADVTIAQVSEVVELGGLDPEHIITPGIFVQHVVQVQPAQ >gi|333032525|gb|GL891901.1| GENE 2 356 - 580 327 74 aa, chain + ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 4 71 10 77 220 95 67.0 1e-20 MSYQKLSRDQIAQLVAQDIPDGAYVNLGIGLPTKIASYLPADKDVFLHSENGLLAFGPPP AAGEEDPELINLAS >gi|333032525|gb|GL891901.1| GENE 3 773 - 1105 343 110 aa, chain + ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 1 101 116 216 220 129 65.0 1e-30 MAANGDLANWHTGAPDAIPAVGGAMDLAVGAKKVFITTDHITKQGEPKIVAELTYPVTGK HCVDRIYTDLCVIDVTKDGLKVIEKVEGLSFDELQAPPPLPRKYLSLQTM >gi|333032525|gb|GL891901.1| GENE 4 1129 - 1308 229 59 aa, chain + ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 5 53 169 217 220 58 61.0 2e-09 MAELTYPVTGKHCVDRIYTDLCVIDVTKDGLKVIEKVEGLSFDELQALTGATLIDATQG >gi|333032525|gb|GL891901.1| GENE 5 1292 - 1510 70 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLKGKVYTTNTYYTAFTIVTGDMDVARWTGRHGSLLCSTKVFVTFDLSKVRYRLYNRPM DITINYSCDVIR >gi|333032525|gb|GL891901.1| GENE 6 1728 - 2195 543 155 aa, chain + ## HITS:1 COG:RSc2252 KEGG:ns NR:ns ## COG: RSc2252 COG0183 # Protein_GI_number: 17546971 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 1 134 1 134 400 197 75.0 6e-51 MKNAYIIDAIRTPFGRYAGGLAPVRADDLGAVPIKALMQRNPRVDWEQVDDVIYGCANQA GEDNRNVGRMSALLAGLPYQVPATTINRLCGSSLDAIAIAARAIKAGEANLVIAGGVESM SRAPYVMGKSDNAFPPPPMTLALCRLKHSCSVTRM >gi|333032525|gb|GL891901.1| GENE 7 2174 - 2654 492 160 aa, chain + ## HITS:1 COG:PA0228 KEGG:ns NR:ns ## COG: PA0228 COG0183 # Protein_GI_number: 15595425 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 159 39 197 401 228 69.0 3e-60 MQRNPNVDWEQVDDVIYGCANQAGEDNRNVGRMSALLAGLPYQVPATTINRLCGSSLDAI AIAARAIKAGEANLVIAGGVESMSRAPYVMGKSDSAFGRSQKIEDTTMGWRFINPKLKEL YGVDTMPQTAENVAEQFNVNRADQDQFALVSQQRTASAQA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:11:27 2011 Seq name: gi|333032524|gb|GL891902.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld198, whole genome shotgun sequence Length of sequence - 1493 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 9 - 68 1.8 1 1 Op 1 . + CDS 125 - 910 1120 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 932 - 961 2.1 2 1 Op 2 . + CDS 975 - 1491 554 ## ACICU_02735 hypothetical protein Predicted protein(s) >gi|333032524|gb|GL891902.1| GENE 1 125 - 910 1120 261 aa, chain + ## HITS:1 COG:YPO2110 KEGG:ns NR:ns ## COG: YPO2110 COG5492 # Protein_GI_number: 16122345 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Yersinia pestis # 1 254 58 312 401 316 62.0 4e-86 MGGSIKHRDVNSTAKVVPEKIGSGESVGVKVPYKYGPYASTEEAFKRRARTPEEFAMILG YDLADALVAGRLQYSLASLKAAISSNPDMVAKGSIAVDGRKALTRGMRKFGDKFGRISLW VMNSDTYFDIVDDAITNQIYGESEIVIYGGLPGTLGKPVLVTDAVGDDDAFGLQMGAVTV TESQVPGFRAYDINDEENLAIGMRAEGTFNLDILGYSWDTSKGENPDLTLLGSSANWKKH ATSNKMTAGTLLDLSGTTTTG >gi|333032524|gb|GL891902.1| GENE 2 975 - 1491 554 172 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02735 NR:ns ## KEGG: ACICU_02735 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 172 1 172 221 271 100.0 9e-72 MKLIYTRIAAAAALEVGTIANPDYYEHPNRSAEEVIIYGDYPKIQNDYQALDIPVEVRKL EEPAKTTLATVNVAVGITPELQEVIDKTKAECEKVVEENGQLKQKIEILEQASGDSSELI SENSRLKDAVLQADNATKAAEEKVVSIQAEFDAFKNDVAAMQARIAELEAGK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:11:31 2011 Seq name: gi|333032523|gb|GL891903.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld199, whole genome shotgun sequence Length of sequence - 1638 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 4 - 279 148 ## ABSDF2500 hypothetical protein - Prom 367 - 426 80.4 - Term 338 - 404 30.0 2 2 Op 1 . - CDS 518 - 772 58 ## ACICU_01014 hypothetical protein 3 2 Op 2 . - CDS 783 - 1034 258 ## ABSDF1321 hypothetical protein - Prom 1054 - 1113 8.0 + Prom 1031 - 1090 5.7 4 3 Tu 1 . + CDS 1143 - 1638 269 ## COG2932 Predicted transcriptional regulator Predicted protein(s) >gi|333032523|gb|GL891903.1| GENE 1 4 - 279 148 91 aa, chain - ## HITS:1 COG:no KEGG:ABSDF2500 NR:ns ## KEGG: ABSDF2500 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 5 91 59 145 145 130 87.0 2e-29 MNTNNLSEQPIELNSPDFLIGDVVVLTKECRSFKSNDLFEVKNKTLTRLWTIKSENHLIL VSSKEIRTATVAELNAKRRLTKAEQALAEVS >gi|333032523|gb|GL891903.1| GENE 2 518 - 772 58 84 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01014 NR:ns ## KEGG: ACICU_01014 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 84 1 84 106 119 83.0 3e-26 MSKVSNELPASASNNESLILQALNTSNQRQVAEKVGIDASTLSRMKNDKKNNGLTEIEFI SSLLTAIGLKVVPESDVYCSPEIS >gi|333032523|gb|GL891903.1| GENE 3 783 - 1034 258 83 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1321 NR:ns ## KEGG: ABSDF1321 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 83 1 83 83 154 98.0 1e-36 MNDAQLIDKLGGVTAVARLLGITPPSVSGWKAIPLDKKIRLAVIAEDLGLTTRKELFPDN YQDIWIELRPQTTKSRNLGSLTA >gi|333032523|gb|GL891903.1| GENE 4 1143 - 1638 269 165 aa, chain + ## HITS:1 COG:XF2511 KEGG:ns NR:ns ## COG: XF2511 COG2932 # Protein_GI_number: 15839101 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 3 77 2 73 256 72 52.0 3e-13 MNTLAERLRYAMEVLPPKKIKGVELARAVGVKPPSVSDWLSGKSKTMEGENLLRASKFLN VNPSWLASGTGEIQSSTRDKFKQLDIEAFKKKYNISDSDEALLFSTIIEKPFTPSSKRWV PVKAYSKMGMDGYFTDMGYEGNAGDGYVPTHSAGPRAYGIKGTGD Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:11:38 2011 Seq name: gi|333032522|gb|GL891904.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld201, whole genome shotgun sequence Length of sequence - 3815 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 2, operones - 2 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 47 - 475 246 ## A1S_2033 hypothetical protein - Term 481 - 513 2.3 2 1 Op 2 . - CDS 517 - 699 220 ## gi|332874857|ref|ZP_08442717.1| hypothetical protein HMPREF0022_02338 3 1 Op 3 . - CDS 754 - 1236 320 ## ABSDF1021 hypothetical protein 4 1 Op 4 . - CDS 1238 - 1513 111 ## AB57_3235 hypothetical protein 5 1 Op 5 . - CDS 1464 - 1667 100 ## gi|260556803|ref|ZP_05829021.1| predicted protein 6 1 Op 6 . - CDS 1670 - 1978 299 ## gi|332874860|ref|ZP_08442720.1| conserved domain protein 7 1 Op 7 . - CDS 1981 - 2154 74 ## gi|260556802|ref|ZP_05829020.1| predicted protein - Prom 2217 - 2276 3.8 - Term 2461 - 2494 0.5 8 2 Op 1 . - CDS 2705 - 3184 407 ## ABSDF1333 hypothetical protein 9 2 Op 2 . - CDS 3195 - 3464 86 ## gi|332874865|ref|ZP_08442725.1| conserved domain protein 10 2 Op 3 . - CDS 3553 - 3807 123 ## gi|332874866|ref|ZP_08442726.1| conserved domain protein Predicted protein(s) >gi|333032522|gb|GL891904.1| GENE 1 47 - 475 246 142 aa, chain - ## HITS:1 COG:no KEGG:A1S_2033 NR:ns ## KEGG: A1S_2033 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 24 142 1 119 119 215 91.0 6e-55 MDSTEYFWLTRKKEPKTKPKSRPLPKAKEKYLKAEETLFQELEEHRIGYRRKFQFESTKN WRFDFYIVKLNLLIEIAGSPWAVGRGGTKIANSFNKYDLALDRGYVFERLEPHQIESGYA INWIKSELARIEDESDQTISSN >gi|333032522|gb|GL891904.1| GENE 2 517 - 699 220 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874857|ref|ZP_08442717.1| ## NR: gi|332874857|ref|ZP_08442717.1| hypothetical protein HMPREF0022_02338 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02338 [Acinetobacter baumannii 6014059] # 1 60 1 60 60 105 100.0 1e-21 MTMNNLEYEAVIECEKIKGKAAIAVAILSNCGGHGVMDLSELSRDNLLKYIKEVQATLDE >gi|333032522|gb|GL891904.1| GENE 3 754 - 1236 320 160 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1021 NR:ns ## KEGG: ABSDF1021 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 160 9 168 168 283 88.0 2e-75 MEPRFVIKNHSDINYVIGYLNNNHAKAASEGKPLVVLIAPQEKDRTKAQNRLYWMWLNQW AKRQGTDKDYEHLFFKKNFLAKIYDRDDVGQYKKTFKAVRELKDSKHPLYQDVANGLCEL MSTTDASTAQFAEYLNDIHAWCNKQGCYLETPDDLKYVLE >gi|333032522|gb|GL891904.1| GENE 4 1238 - 1513 111 91 aa, chain - ## HITS:1 COG:no KEGG:AB57_3235 NR:ns ## KEGG: AB57_3235 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 91 1 91 91 125 65.0 5e-28 MRSTKRLNEIRALPCVRCGYPHSQAAHSNSSKHGKGRGIKASDLYTVPLCYACHAAFDKF ELGTRQESEALFDGWLEKTERMLNLKDDEVF >gi|333032522|gb|GL891904.1| GENE 5 1464 - 1667 100 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|260556803|ref|ZP_05829021.1| ## NR: gi|260556803|ref|ZP_05829021.1| predicted protein [Acinetobacter baumannii ATCC 19606] predicted protein [Acinetobacter baumannii ATCC 19606] # 1 67 1 67 67 87 98.0 2e-16 MDTIEAKKNLEIYKRNLSRLENYNHLFSSHTFKTECQREVNTLRTRIENLENAFDKEAKR NKSATMR >gi|333032522|gb|GL891904.1| GENE 6 1670 - 1978 299 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874860|ref|ZP_08442720.1| ## NR: gi|332874860|ref|ZP_08442720.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 102 1 102 102 158 100.0 2e-37 MIIYEMIYHSGPEDYTSDFYKENNEKSRRHFVNQISKDTRQTLSDYLADPYFNKELDAYV IEAFEEEIEALNHMKVEFIKNGRVNHSSYVSIVVAERLVKDV >gi|333032522|gb|GL891904.1| GENE 7 1981 - 2154 74 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|260556802|ref|ZP_05829020.1| ## NR: gi|260556802|ref|ZP_05829020.1| predicted protein [Acinetobacter baumannii ATCC 19606] predicted protein [Acinetobacter baumannii ATCC 19606] # 1 57 25 81 81 108 98.0 1e-22 MTPKEKQDIYEWNTAHNELHEEFMEGFEEPQFINGFKVGIWLAFCAAIIWIFWHFLG >gi|333032522|gb|GL891904.1| GENE 8 2705 - 3184 407 159 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1333 NR:ns ## KEGG: ABSDF1333 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 156 3 159 165 125 41.0 8e-28 MNAAVNHIMQTVNWKERTLEGWLRAFGAWCDACPNNRLTIIKTTPDKKLTQDQREWLLNV YMNDGEYIGRMPTPKKSGRLINDNEARAFQRLWLDIKDNASEVLQEWLDLVWSHYVSGYS LREIALRRGISKASVDQDIRCGIAYMRGQASFIKSERAG >gi|333032522|gb|GL891904.1| GENE 9 3195 - 3464 86 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874865|ref|ZP_08442725.1| ## NR: gi|332874865|ref|ZP_08442725.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 89 1 89 89 145 100.0 8e-34 MKSKVDVDALKLTLQWQGFFLKGWFEDHWCDLKDYAEASLKLLLIILRILFSPLLIIYVI WQTRKMYEQIASGEVNREKVRTHIKKYGK >gi|333032522|gb|GL891904.1| GENE 10 3553 - 3807 123 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874866|ref|ZP_08442726.1| ## NR: gi|332874866|ref|ZP_08442726.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 84 3 86 86 148 98.0 1e-34 MCSADAYRQVNEQIARRVGMNHATGILLAEIAQAMGIAVLLVKPTKSKLNAEQFNKITGW QGRTNQEQRDAGMLIWGMNGKKVA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:12:23 2011 Seq name: gi|333032521|gb|GL891905.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld202, whole genome shotgun sequence Length of sequence - 675 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:12:24 2011 Seq name: gi|333032520|gb|GL891906.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld210, whole genome shotgun sequence Length of sequence - 2461 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 30 - 89 15.0 1 1 Tu 1 . + CDS 231 - 2447 2701 ## ACICU_02946 putative hemagglutinin/hemolysin-like protein Predicted protein(s) >gi|333032520|gb|GL891906.1| GENE 1 231 - 2447 2701 738 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02946 NR:ns ## KEGG: ACICU_02946 # Name: not_defined # Def: putative hemagglutinin/hemolysin-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 523 1 523 523 677 99.0 0 MPEIQIIAKDNHKTLVTTEGTSAKLSEASVVLVKVAASDVLVVNREGTNAVIRLKNGETI VIEGFFSGTAEPKDNSLVFQDENGQLIWAKFKDAENDADADSDADADADSDVEPQALLGE DLPAALPAEAPQELVSDVIYQPISSIEPLLYHDAGVNPWLWAAIPLVAGGIIAAASNHDS DDDSSAPVDTTPPSTDGVTFSVDPVTSDNVINASEASGNVTITGVLKNIPADAANTAVTV VINGVTYNATVDKAAGTWTVSVPGSGLVADADKTIDAKVTFTDAAGNSSSVNDTQTYTLD TTAPNTPVIDPVNGTDPITGTAEPGSTVTVTYPDGSTKTVVAGPDGTWTVPNPGLNDGDE VTAVATDPAGNTSGPGTAIVDAVGPNTDGVNFAVDSVTADNVINASEAAGNVTITGILKN VPSDAAATAVTIVINGVTYTATVDSAAGTWTVSVPGSGLVADTDKTIDAKVTFTDAAGNS STVNDTQTYTLDTAAPSAPVIDPVNGTDPITGTAEPGSTVTVTYPNGDTATVVAGPDGSW SVPNPGLNDGDEVEAIATDPAGNPSLPGTAIVDAVGPNTDGVNFTVDSVTADNVINASEA SGNVTVTGVLKNVPADAANTVVTVVINGQTYTATVDSTAGTWTVSVPGSDLTADADKTID AKVTFTDAAGNSSSVNDTQTYTLDTTAPDAPVINPVNGTDPITGTAEPGSTVTVTYPNGD TATVVAGPDGSWSVCTGA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:12:38 2011 Seq name: gi|333032519|gb|GL891907.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld227, whole genome shotgun sequence Length of sequence - 811 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 496 130 ## ACICU_01017 hypothetical protein 2 1 Op 2 . - CDS 489 - 788 314 ## ACICU_01016 hypothetical protein Predicted protein(s) >gi|333032519|gb|GL891907.1| GENE 1 1 - 496 130 165 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01017 NR:ns ## KEGG: ACICU_01017 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 165 1 165 293 301 100.0 6e-81 MSNFVPNSFQVPNAFVDEVLNKISDAACKIYLVICRKTRGWNKEMDSISLTQFEEITGKS RPTVVKCLNELIKVGLVVEQPSTIHGNTFKLGNDTSVGLVLKFPSKNFLLPEIYGQTSKN SLPLLVKNFNYTSKNFLPLLVKIFNTQSITIKNNSQSNKKINKKR >gi|333032519|gb|GL891907.1| GENE 2 489 - 788 314 99 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01016 NR:ns ## KEGG: ACICU_01016 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 26 99 1 74 74 136 97.0 2e-31 MNSQFKYKPEYKQTQEIQSFFDPALVILNELHDRNRKNLRAKGYDENNAAITREEFSQTM AQRFRINQWLAGQIVNSLANADLVQKFGGYVKPKVGVHE Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:12:46 2011 Seq name: gi|333032518|gb|GL891908.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld236, whole genome shotgun sequence Length of sequence - 7380 bp Number of predicted genes - 13, with homology - 13 Number of transcription units - 9, operones - 3 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 80 - 229 68 ## AOLE_07965 DNA-directed DNA polymerase UmuC 2 2 Op 1 . - CDS 234 - 827 633 ## gi|332874876|ref|ZP_08442732.1| conserved domain protein 3 2 Op 2 . - CDS 834 - 1448 451 ## gi|332874877|ref|ZP_08442733.1| conserved domain protein 4 2 Op 3 . - CDS 1492 - 2172 259 ## gi|332874878|ref|ZP_08442734.1| conserved domain protein - Prom 2196 - 2255 9.8 - Term 2309 - 2347 2.4 5 3 Op 1 . - CDS 2362 - 2907 432 ## COG3926 Putative secretion activating protein - Term 2920 - 2948 1.0 6 3 Op 2 . - CDS 2968 - 3117 56 ## gi|332874880|ref|ZP_08442736.1| hypothetical protein HMPREF0022_02357 - Term 3198 - 3226 2.3 7 4 Tu 1 . - CDS 3246 - 4172 546 ## COG3617 Prophage antirepressor - Prom 4253 - 4312 8.6 + Prom 4255 - 4314 8.0 8 5 Tu 1 . + CDS 4338 - 4598 279 ## ACIAD2172 phage regulatory protein - Term 4577 - 4603 -1.0 9 6 Tu 1 . - CDS 4618 - 5109 228 ## gi|332874885|ref|ZP_08442740.1| conserved domain protein 10 7 Op 1 . - CDS 5166 - 5492 64 ## gi|332874886|ref|ZP_08442741.1| hypothetical protein HMPREF0022_02362 11 7 Op 2 . - CDS 5496 - 5807 240 ## AOLE_13175 hypothetical protein - Prom 5854 - 5913 7.6 - Term 6008 - 6033 -0.5 12 8 Tu 1 . - CDS 6036 - 6425 519 ## ACICU_01067 hypothetical protein - Term 6444 - 6476 2.3 13 9 Tu 1 . - CDS 6493 - 7380 733 ## ABAYE2691 bacteriophage protein Predicted protein(s) >gi|333032518|gb|GL891908.1| GENE 1 80 - 229 68 49 aa, chain + ## HITS:1 COG:no KEGG:AOLE_07965 NR:ns ## KEGG: AOLE_07965 # Name: not_defined # Def: DNA-directed DNA polymerase UmuC # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 49 383 431 432 95 75.0 7e-19 MQAMDGIHSKFGKKKLGVGPCFVPGRNWSMSRDKLSRNPFKWDELLTIK >gi|333032518|gb|GL891908.1| GENE 2 234 - 827 633 197 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874876|ref|ZP_08442732.1| ## NR: gi|332874876|ref|ZP_08442732.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 197 1 197 197 351 100.0 2e-95 MTIFVRKISKAKWPSEEEIAEKALDSEIIPFVRADALTTCLKTSQNTLSVWAVENCTDAE IEKAILALITNTKLERLNRIQIVYFSKEDVDSLGLPIAVTEGDTIIESLSKLHNDLVDLN YEKLGKVSQLIISSLRSESVRTYNERKLKDMLLKAINEGIVDQKLLHPSLQSKLGLPVLD QNGNALIKQENGEFVKV >gi|333032518|gb|GL891908.1| GENE 3 834 - 1448 451 204 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874877|ref|ZP_08442733.1| ## NR: gi|332874877|ref|ZP_08442733.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 204 1 204 204 353 100.0 4e-96 MYESGNHKKIITKYEIETIKTVWQTDKIQSFLKDYLNTDVVSITDPTVIEQKIGEESLKQ IKREFDIFKNKFDNFLRYEDVPVDYVSPIENELINFYKHSKVEVQEQISQWIIDSFDNTK VLLNILKILGNIAPDFIDHQFLTNFLIVLNHKDTEIKEYALRIQEKLMLPSYNNVLKHSK LTPKWIDDYRKELVELYEEDNKGS >gi|333032518|gb|GL891908.1| GENE 4 1492 - 2172 259 226 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874878|ref|ZP_08442734.1| ## NR: gi|332874878|ref|ZP_08442734.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 226 1 226 226 388 100.0 1e-106 MNDQVFQLQIVINGGLTPIQSKPETLDKLVKEFAINHLLFPKEITEQLIEINSQDGSQTK KITKFIDLVSSNQKCTYQIRNDSLVFLNSFEKIEELESIFEKFFKSFSDLTPYINYKQSK RLGLVLIREDYNEVTLREYCTSEELDRNVIENRSRKVTRFAMAELNEMVNLSVSKDYVTH ESGVSRNTLASVYDVNTLSTKDVFRFTSKDVVKFINASKKFILESM >gi|333032518|gb|GL891908.1| GENE 5 2362 - 2907 432 181 aa, chain - ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 7 180 5 177 177 177 52.0 7e-45 MNIEQYLDELIKREGGYVNNPADRGGATKYGITEAVARANGFKGNMRDLPLDVAKAIYRK NYWTAPRFDQVNTISSAVAEELLDTGVNCGTGFAKPLLQRALNLLNNNGKAGWPDLSVDG IYGPATLNALKTYLVKRGKEGEKVLVRVLNIMQGQRYIEICERNPSQEQFFYGWIANRVS M >gi|333032518|gb|GL891908.1| GENE 6 2968 - 3117 56 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874880|ref|ZP_08442736.1| ## NR: gi|332874880|ref|ZP_08442736.1| hypothetical protein HMPREF0022_02357 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02357 [Acinetobacter baumannii 6014059] # 1 49 1 49 49 67 100.0 2e-10 MEHFKPIVELIKVSIEKYGLWQTIVAFILLFSVPILMWKLDVIIASIKA >gi|333032518|gb|GL891908.1| GENE 7 3246 - 4172 546 308 aa, chain - ## HITS:1 COG:YPO2093 KEGG:ns NR:ns ## COG: YPO2093 COG3617 # Protein_GI_number: 16122332 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Yersinia pestis # 6 112 5 122 187 117 52.0 2e-26 MSSLALSFNEVKFNPVPRQDGQIWLSSGELAQALGYKQENAVSKIFNRNSDEFTENMTQI IDNPRLPNLGMRIFSLRGCHLIAIFARTAVAKQFRKWVLDVLDKEVGTPVAKTHKSEREP LTNAVNLLVAKTKHLNYSDAYKLVHQRFNVQHIDEIPYDMIPVAVEYVHHLIAMYSSAEK KAQGSLFDNETLGLVKDLVDAIISQNFVTSKIYRAIHMLSNEQGHYLAEYAFKTNIAVLK LTRTMDLRGPLNREIISDDLKTIRGGGDLKTISYTTGNQHYGDRWFHPLMESSRLMGVLE ISGSLIRH >gi|333032518|gb|GL891908.1| GENE 8 4338 - 4598 279 86 aa, chain + ## HITS:1 COG:no KEGG:ACIAD2172 NR:ns ## KEGG: ACIAD2172 # Name: not_defined # Def: phage regulatory protein # Organism: Acinetobacter_ADP1 # Pathway: not_defined # 6 86 5 85 85 83 59.0 3e-15 MARSSDVEYKMRMTQELKEKILESAKLNSRSMNADIVARLEKSFENQNYEKTVELIPTET LMMELASRMKGYTITVSEKSDIKKAP >gi|333032518|gb|GL891908.1| GENE 9 4618 - 5109 228 163 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874885|ref|ZP_08442740.1| ## NR: gi|332874885|ref|ZP_08442740.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 163 1 163 163 305 100.0 1e-81 MRKIILLGLICLPVFAYANSCEVAKSKINISGLALGKSILSLKAEHPKNLSIDHETNKAN INYVHSNEFEDAFSGTPATNAGFISFDGNTKLINAFSVSFGHLDNFSANNYKNGLVALYS LPKTGWIESKSNGVKVFKYECTDYSLEINYNPERSSFMIFKEI >gi|333032518|gb|GL891908.1| GENE 10 5166 - 5492 64 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332874886|ref|ZP_08442741.1| ## NR: gi|332874886|ref|ZP_08442741.1| hypothetical protein HMPREF0022_02362 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02362 [Acinetobacter baumannii 6014059] # 1 108 1 108 108 199 100.0 8e-50 MKKLLPIAFLLTASFVTHSADTNDKHCRDVNKLAENVMLFRQEGVSVVRQMEMIESIKPS RDFKRLMEMMVEEAYKEPKFGSEEYKAEAITEFANNWYIQCKQANRNK >gi|333032518|gb|GL891908.1| GENE 11 5496 - 5807 240 103 aa, chain - ## HITS:1 COG:no KEGG:AOLE_13175 NR:ns ## KEGG: AOLE_13175 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 5 103 14 112 112 95 43.0 8e-19 MAVFSTSFSHALAPKNGDEPTYCEQIVSVHGLLTRAQFECGYSEYNNELISDSAKCFQHE LGEEYGKKVLIFGMKEFDRNVKKDGKNKICNSLLKEFPEYVRK >gi|333032518|gb|GL891908.1| GENE 12 6036 - 6425 519 129 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01067 NR:ns ## KEGG: ACICU_01067 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 129 1 129 129 226 96.0 2e-58 MEPVSTSGLTAILKFYGAAIMVTLAVALVAAVVLMTRMPRSPQEWAVGLICTVVSSLAGG SFIIVKWGLHEWVTDVWGMIALGGFFFVCGLPGWALVRWIFNFIDKQEGKTIVEVIKEFK KARKDIENS >gi|333032518|gb|GL891908.1| GENE 13 6493 - 7380 733 295 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2691 NR:ns ## KEGG: ABAYE2691 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 295 854 1148 1148 600 98.0 1e-170 VYIRYDQLDINLARLYQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKFDYNSS PPKREYIVPAASELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAFGAWSTDPDYN FTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGA GAPFGRVMTGQPITNDSQDWRWYFNGDFMVVKVTDAEASVPGKGYRTQNDRYGSPLSGDG GGWGQRGTKSTNDGTWNWQYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:13:51 2011 Seq name: gi|333032517|gb|GL891909.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld246, whole genome shotgun sequence Length of sequence - 539 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 539 482 ## COG5295 Autotransporter adhesin Predicted protein(s) >gi|333032517|gb|GL891909.1| GENE 1 2 - 539 482 179 aa, chain - ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 48 157 971 1079 1291 71 48.0 8e-13 GKLGEKLNIVGGAAASTPVAKTSGENVITRTTKDGIQIELLKDSKFDSVTTGNTTLNTNG LTIKEGPSITKDGINAGGKKITNVADGINAKDAVNKSQLDNLAAKQNATDDAAVKYDDAK TKDKVTLKGKDGTVLDNVKAGHISSTSKEAVNGSQIHNISNSIKNSIGGNTVVNPDGSL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:13:52 2011 Seq name: gi|333032516|gb|GL891910.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld256, whole genome shotgun sequence Length of sequence - 1835 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 127 - 170 6.3 1 1 Tu 1 . - CDS 202 - 1509 1164 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 1759 - 1818 7.3 Predicted protein(s) >gi|333032516|gb|GL891910.1| GENE 1 202 - 1509 1164 435 aa, chain - ## HITS:1 COG:RSc1957 KEGG:ns NR:ns ## COG: RSc1957 COG1301 # Protein_GI_number: 17546676 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Ralstonia solanacearum # 1 418 1 413 428 468 63.0 1e-131 MKQKKLLKYIVVAILLGVLTGWICHHFFNEGEQLKQIASYFNIVTDIFLRLIKMIIAPLV FATIVCGIVSMGKSTSIGSITLKSMTWFITASFVSLAIGMGLANFFQPGAALDLALPTAQ QLSSSSLPTTTGFTLQSFLSHVFPRSIAEAMANNDILQVLVFSIFFGSALAFVNQGKEKD SVIIRLTDELSKIMFRITDYVMMFAPFAVFAAIASAITVQGLGLIVDYGILIAEFYFGLL LLWVILFSVGAIVLKKDIFRLGKLIREPVTLAFATASSESAYPKVMDALNKFGVPKKVTS FVLPLGYSFNLDGSMMYTTFAVLFIAQAYNIDLSFTQQILILLTLMVTSKGIAGVSRASI VVISATLTMFHLPEAGILLLLGIDQFLDMGRTATNVVGNSIATAVVAKLEGDKVADTEEL PEPVLIKSTQEQTIA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:13:53 2011 Seq name: gi|333032515|gb|GL891911.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld261, whole genome shotgun sequence Length of sequence - 1841 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 49 - 372 219 ## ABAYE2751 hypothetical protein 2 1 Op 2 . - CDS 365 - 655 239 ## ACICU_01005 hypothetical protein 3 1 Op 3 . - CDS 655 - 1098 299 ## ACICU_01006 hypothetical protein - Prom 1183 - 1242 7.5 + Prom 1191 - 1250 7.1 4 2 Tu 1 . + CDS 1292 - 1534 120 ## ACICU_01007 hypothetical protein + Term 1702 - 1742 4.2 5 3 Tu 1 . - CDS 1541 - 1744 142 ## ACICU_01008 hypothetical protein Predicted protein(s) >gi|333032515|gb|GL891911.1| GENE 1 49 - 372 219 107 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2751 NR:ns ## KEGG: ABAYE2751 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 107 2 108 108 199 99.0 2e-50 MSNFKKHPDGYKSFLGRDDKGLYSVRIGWQVYASNANGSVLYKVKDGVKTPLNVFRFQTD YPKVWNELTQEIDFQRRKQLAIKLRETNIPTYDRKAYKTKRGFTGSR >gi|333032515|gb|GL891911.1| GENE 2 365 - 655 239 96 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01005 NR:ns ## KEGG: ACICU_01005 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 96 1 96 96 175 100.0 7e-43 MKDYNCPTCKKMIPVDRSKIKAGDEVSFCRVTQSSKSARFSSKEGIVDCREGDVVLVKYR KEIIPLNIKDVSPVDAPSPLTYAFVGACECKEAEHV >gi|333032515|gb|GL891911.1| GENE 3 655 - 1098 299 147 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01006 NR:ns ## KEGG: ACICU_01006 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 147 1 147 147 273 100.0 1e-72 MNVKATPFNSFAFVSMAALAISGGSLVACQLQPAFQTKDAPTLFTPKTQPSTYSVLTAKI TGKHSGVAVIKLDSFRLNVSFDFEAHPDSYGVPGSEFTTVDITQLTVNEITDINGKSYND FTEFEDIRNINSLLKGFIERNKLVEAA >gi|333032515|gb|GL891911.1| GENE 4 1292 - 1534 120 80 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01007 NR:ns ## KEGG: ACICU_01007 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 80 1 80 80 137 100.0 2e-31 MSLGEEMFEWRKQMVEKLLLQESNIDQLEEKVDRAEKILFGDCTAAFKIECTLRNAYALK AILDDFATKNNCKVSIVECE >gi|333032515|gb|GL891911.1| GENE 5 1541 - 1744 142 67 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01008 NR:ns ## KEGG: ACICU_01008 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 67 1 67 67 87 100.0 1e-16 MKTEIIEALALELTKATIADTDPSTINIKSADLWVKTYQESLKAVEEALKELKPKPKATS KPISGMS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:14:35 2011 Seq name: gi|333032514|gb|GL891912.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld262, whole genome shotgun sequence Length of sequence - 109070 bp Number of predicted genes - 108, with homology - 105 Number of transcription units - 60, operones - 29 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 182 - 256 83.0 # Thr GGT 0 0 - TRNA 270 - 345 91.8 # Gly TCC 0 0 + Prom 121 - 180 3.4 1 1 Tu 1 . + CDS 382 - 693 144 ## - TRNA 383 - 466 62.9 # Tyr GTA 0 0 - TRNA 523 - 598 94.2 # Thr TGT 0 0 - Term 555 - 589 -0.5 2 2 Tu 1 . - CDS 698 - 2191 1680 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 3 3 Tu 1 . - CDS 2300 - 2968 545 ## COG0546 Predicted phosphatases - Term 2979 - 3010 2.1 4 4 Op 1 . - CDS 3034 - 3663 743 ## ABBFA_003263 FHA domain protein 5 4 Op 2 . - CDS 3704 - 5980 1987 ## COG1450 Type II secretory pathway, component PulD 6 4 Op 3 . - CDS 6022 - 6858 672 ## ACICU_00291 putative general secretion pathway protein 7 4 Op 4 . - CDS 6858 - 7601 628 ## ACICU_00290 putative general secretion pathway protein - Prom 7851 - 7910 7.0 - Term 7883 - 7914 2.5 8 5 Tu 1 . - CDS 7934 - 8260 558 ## ABBFA_003266 putative DNA-binding protein (histone) - Prom 8390 - 8449 6.0 - Term 8306 - 8348 -0.8 9 6 Op 1 . - CDS 8455 - 8895 424 ## COG0824 Predicted thioesterase 10 6 Op 2 . - CDS 8903 - 10096 1041 ## ABSDF3265 hypothetical protein 11 6 Op 3 . - CDS 10106 - 10945 672 ## ABSDF3264 hypothetical protein 12 6 Op 4 23/0.000 - CDS 10954 - 11721 568 ## COG1587 Uroporphyrinogen-III synthase 13 6 Op 5 2/0.143 - CDS 11726 - 12655 994 ## COG0181 Porphobilinogen deaminase - Prom 12675 - 12734 2.4 14 7 Op 1 9/0.143 - CDS 12744 - 13478 529 ## COG3279 Response regulator of the LytR/AlgR family 15 7 Op 2 . - CDS 13545 - 14684 744 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain - Prom 14768 - 14827 2.6 + Prom 14596 - 14655 6.2 16 8 Op 1 . + CDS 14675 - 16108 1803 ## COG0165 Argininosuccinate lyase 17 8 Op 2 . + CDS 16118 - 16387 337 ## COG2924 Fe-S cluster protector protein + Term 16419 - 16456 6.4 - Term 16647 - 16677 2.0 18 9 Tu 1 . - CDS 16701 - 17405 997 ## COG0704 Phosphate uptake regulator - Prom 17461 - 17520 6.3 - Term 17444 - 17484 3.2 19 10 Op 1 . - CDS 17531 - 18862 1477 ## COG1538 Outer membrane protein - Prom 18882 - 18941 4.0 20 10 Op 2 2/0.143 - CDS 18958 - 19863 942 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 21 10 Op 3 . - CDS 19856 - 20437 621 ## COG1309 Transcriptional regulator - Prom 20532 - 20591 5.5 + Prom 20462 - 20521 7.0 22 11 Tu 1 . + CDS 20563 - 21627 869 ## ACICU_00275 hypothetical protein + Prom 21657 - 21716 2.7 23 12 Op 1 . + CDS 21886 - 23763 2319 ## COG0422 Thiamine biosynthesis protein ThiC 24 12 Op 2 1/0.286 + CDS 23839 - 24465 333 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 25 12 Op 3 . + CDS 24470 - 25282 551 ## COG1409 Predicted phosphohydrolases + Term 25391 - 25430 1.5 + Prom 25414 - 25473 3.9 26 13 Op 1 3/0.143 + CDS 25493 - 26029 696 ## COG1734 DnaK suppressor protein 27 13 Op 2 . + CDS 26032 - 26964 704 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 26975 - 27006 2.1 - Term 26955 - 26999 10.1 28 14 Op 1 25/0.000 - CDS 27014 - 28210 1361 ## COG0772 Bacterial cell division membrane protein 29 14 Op 2 . - CDS 28235 - 29581 1559 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase - Prom 29609 - 29668 3.3 - Term 29683 - 29713 2.0 30 15 Op 1 . - CDS 29742 - 29993 265 ## ACICU_00267 hypothetical protein 31 15 Op 2 22/0.000 - CDS 30014 - 31867 2044 ## COG0370 Fe2+ transport system protein B 32 15 Op 3 . - CDS 31864 - 32163 344 ## COG1918 Fe2+ transport system protein A + Prom 32126 - 32185 9.0 33 16 Op 1 . + CDS 32271 - 33191 872 ## COG4974 Site-specific recombinase XerD + Prom 33242 - 33301 4.5 34 16 Op 2 . + CDS 33338 - 34153 715 ## COG1651 Protein-disulfide isomerase + Term 34196 - 34236 4.1 + Prom 34198 - 34257 6.0 35 17 Op 1 11/0.143 + CDS 34386 - 35699 1903 ## COG0460 Homoserine dehydrogenase 36 17 Op 2 . + CDS 35755 - 36894 1662 ## COG0498 Threonine synthase + Term 36907 - 36956 10.1 - Term 36919 - 36968 8.4 37 18 Tu 1 . - CDS 37001 - 38023 1104 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 38086 - 38145 5.2 + Prom 38175 - 38234 6.1 38 19 Op 1 12/0.071 + CDS 38260 - 38895 814 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 39 19 Op 2 13/0.071 + CDS 38906 - 40474 1147 ## COG0642 Signal transduction histidine kinase 40 19 Op 3 . + CDS 40499 - 41920 1488 ## COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 41 20 Op 1 . - CDS 41924 - 43063 953 ## COG0793 Periplasmic protease 42 20 Op 2 . - CDS 43124 - 44671 2273 ## COG0696 Phosphoglyceromutase - Prom 44700 - 44759 3.5 - Term 44697 - 44731 2.7 43 21 Op 1 22/0.000 - CDS 44797 - 45867 1079 ## COG0795 Predicted permeases 44 21 Op 2 . - CDS 45867 - 46889 1003 ## COG0795 Predicted permeases - Prom 46997 - 47056 5.3 45 22 Op 1 12/0.071 + CDS 47111 - 48559 1668 ## COG0260 Leucyl aminopeptidase 46 22 Op 2 . + CDS 48552 - 48959 287 ## COG2927 DNA polymerase III, chi subunit 47 22 Op 3 . + CDS 49001 - 49636 831 ## ACICU_00250 hypothetical protein + Prom 49651 - 49710 8.1 48 23 Tu 1 . + CDS 49767 - 49985 230 ## ABSDF3311 hypothetical protein - Term 49985 - 50025 5.1 49 24 Op 1 . - CDS 50045 - 50704 1042 ## COG0307 Riboflavin synthase alpha chain 50 24 Op 2 . - CDS 50747 - 52039 1337 ## COG3392 Adenine-specific DNA methylase 51 24 Op 3 14/0.071 - CDS 52036 - 53121 1163 ## COG0117 Pyrimidine deaminase 52 24 Op 4 . - CDS 53137 - 53595 381 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains - Prom 53621 - 53680 3.2 - Term 53671 - 53717 -0.0 53 25 Op 1 24/0.000 - CDS 53753 - 55150 1586 ## COG0004 Ammonia permease 54 25 Op 2 . - CDS 55208 - 55546 528 ## COG0347 Nitrogen regulatory protein PII - Prom 55687 - 55746 5.0 + Prom 55646 - 55705 6.1 55 26 Op 1 . + CDS 55826 - 56053 356 ## ABBFA_003314 hypothetical protein 56 26 Op 2 . + CDS 56119 - 56976 708 ## COG0606 Predicted ATPase with chaperone activity 57 26 Op 3 . + CDS 57010 - 58797 857 ## AB57_0548 hypothetical protein + Prom 58834 - 58893 7.4 58 27 Op 1 . + CDS 59138 - 59983 461 ## COG3231 Aminoglycoside phosphotransferase 59 27 Op 2 . + CDS 59989 - 60819 204 ## COG3570 Streptomycin 6-kinase 60 28 Tu 1 . + CDS 60939 - 61163 197 ## S2706 hypothetical protein 61 29 Tu 1 . + CDS 61944 - 62375 145 ## S2705 putative transposase + Prom 62377 - 62436 80.3 62 30 Op 1 . + CDS 62514 - 62975 -329 ## S2705 putative transposase 63 30 Op 2 . + CDS 63213 - 63617 270 ## COG0640 Predicted transcriptional regulators - Term 63336 - 63377 4.0 64 31 Tu 1 . - CDS 63595 - 64218 431 ## COG1309 Transcriptional regulator - Prom 64256 - 64315 5.7 + Prom 64215 - 64274 3.9 65 32 Tu 1 . + CDS 64300 - 65517 701 ## COG0477 Permeases of the major facilitator superfamily + Term 65534 - 65584 -1.0 + Prom 65524 - 65583 8.0 66 33 Tu 1 . + CDS 65812 - 66228 213 ## AB57_0548 hypothetical protein + Prom 66230 - 66289 80.3 67 34 Op 1 . + CDS 66404 - 67252 495 ## AB57_0548 hypothetical protein + Term 67284 - 67319 2.4 + Prom 67313 - 67372 7.2 68 34 Op 2 4/0.143 + CDS 67547 - 69034 1546 ## COG0659 Sulfate permease and related transporters (MFS superfamily) 69 34 Op 3 . + CDS 69047 - 69898 522 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 69904 - 69946 5.5 70 35 Op 1 . + CDS 69966 - 70265 203 ## gi|301348312|ref|ZP_07229053.1| hypothetical protein AbauAB0_18743 71 35 Op 2 . + CDS 70338 - 70709 388 ## AB57_0559 hypothetical protein + Term 70738 - 70801 14.4 + Prom 70736 - 70795 6.6 72 36 Tu 1 . + CDS 70833 - 70937 113 ## + Term 71040 - 71079 6.2 - Term 71027 - 71067 6.4 73 37 Tu 1 . - CDS 71084 - 71998 357 ## AB57_0561 hypothetical protein - Prom 72061 - 72120 1.8 74 38 Op 1 . - CDS 72507 - 73622 513 ## AB57_0562 hypothetical protein 75 38 Op 2 6/0.143 - CDS 73652 - 74572 546 ## COG2842 Uncharacterized ATPase, putative transposase 76 38 Op 3 . - CDS 74577 - 76487 1256 ## COG2801 Transposase and inactivated derivatives 77 38 Op 4 . - CDS 76488 - 77198 450 ## AB57_0565 transposase protein A - Prom 77270 - 77329 7.7 + Prom 77189 - 77248 6.3 78 39 Tu 1 . + CDS 77323 - 78006 757 ## COG0606 Predicted ATPase with chaperone activity + Term 78014 - 78046 4.0 79 40 Tu 1 . - CDS 78021 - 79454 932 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 79686 - 79745 3.5 + Prom 79472 - 79531 5.6 80 41 Op 1 1/0.286 + CDS 79599 - 80342 671 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 81 41 Op 2 . + CDS 80358 - 81236 811 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase + Term 81244 - 81273 1.2 - Term 81225 - 81268 9.5 82 42 Op 1 . - CDS 81279 - 82088 1015 ## ABBFA_003319 hypothetical protein 83 42 Op 2 . - CDS 82148 - 82318 110 ## ABBFA_003320 hypothetical protein - Prom 82416 - 82475 8.3 + Prom 82894 - 82953 10.4 84 43 Tu 1 . + CDS 83016 - 84332 1443 ## ABBFA_003321 porin D precursor + Term 84416 - 84452 -0.8 85 44 Tu 1 . - CDS 84439 - 84966 616 ## COG0221 Inorganic pyrophosphatase - Prom 85003 - 85062 5.4 86 45 Tu 1 . - CDS 85094 - 85504 293 ## COG3686 Predicted membrane protein - Prom 85524 - 85583 3.1 + Prom 85482 - 85541 3.7 87 46 Tu 1 . + CDS 85599 - 85982 329 ## AB57_0234 hypothetical protein + Term 85985 - 86025 5.8 - Term 85973 - 86013 4.2 88 47 Tu 1 . - CDS 86021 - 87700 1956 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II - Prom 87821 - 87880 4.8 - Term 87918 - 87961 0.7 89 48 Tu 1 . - CDS 87998 - 90217 2273 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 90252 - 90311 3.4 90 49 Op 1 . - CDS 90371 - 91690 1266 ## COG0477 Permeases of the major facilitator superfamily - Prom 91710 - 91769 2.2 91 49 Op 2 . - CDS 91773 - 92417 733 ## COG2860 Predicted membrane protein 92 49 Op 3 . - CDS 92463 - 92930 364 ## COG3012 Uncharacterized protein conserved in bacteria 93 49 Op 4 . - CDS 93002 - 94594 1955 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance - Prom 94790 - 94849 9.7 + Prom 94721 - 94780 6.5 94 50 Tu 1 . + CDS 94921 - 95544 643 ## COG1611 Predicted Rossmann fold nucleotide-binding protein + Term 95555 - 95600 1.0 + Prom 95662 - 95721 7.4 95 51 Op 1 . + CDS 95742 - 97133 1140 ## COG0477 Permeases of the major facilitator superfamily 96 51 Op 2 . + CDS 97211 - 97969 705 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 97 51 Op 3 . + CDS 97971 - 99026 798 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + Term 99028 - 99066 -0.1 98 52 Tu 1 . + CDS 99347 - 99700 398 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 99727 - 99770 3.1 - Term 99709 - 99763 3.0 99 53 Tu 1 . - CDS 99846 - 100346 600 ## ACICU_00204 hypothetical protein - Prom 100577 - 100636 6.8 - Term 100612 - 100658 10.7 100 54 Tu 1 . - CDS 100660 - 103038 2599 ## COG1032 Fe-S oxidoreductase - Prom 103189 - 103248 4.2 - Term 103192 - 103227 4.1 101 55 Tu 1 . - CDS 103253 - 104512 1079 ## COG4222 Uncharacterized protein conserved in bacteria - Prom 104537 - 104596 6.4 102 56 Tu 1 . - CDS 104660 - 105064 325 ## COG0789 Predicted transcriptional regulators - Prom 105305 - 105364 3.3 + Prom 105052 - 105111 4.3 103 57 Op 1 . + CDS 105146 - 105631 376 ## ABBFA_003340 hypothetical protein 104 57 Op 2 . + CDS 105648 - 106214 585 ## COG0655 Multimeric flavodoxin WrbA + Term 106271 - 106303 -0.6 + Prom 106556 - 106615 2.5 105 58 Tu 1 . + CDS 106640 - 107128 328 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) + Term 107134 - 107191 12.9 - Term 107129 - 107172 11.2 106 59 Tu 1 . - CDS 107184 - 108182 684 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 108255 - 108314 12.6 107 60 Op 1 . - CDS 108316 - 108420 56 ## 108 60 Op 2 . - CDS 108389 - 108931 527 ## ABBFA_003344 aminoglycoside 2'-N-acetyltransferase(AAC(2')-Ib) - Prom 108953 - 109012 5.0 Predicted protein(s) >gi|333032514|gb|GL891912.1| GENE 1 382 - 693 144 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVVREGFEPSKLSQQSYSLPPLAARESHQYRTYLQCRSLLNQLNTLKWCRHTDSNCGPTD YKSVALPTELCRRFLVFRTFRIGTVCSLAKLPNDASGFLKKNR >gi|333032514|gb|GL891912.1| GENE 2 698 - 2191 1680 497 aa, chain - ## HITS:1 COG:PA0609 KEGG:ns NR:ns ## COG: PA0609 COG0147 # Protein_GI_number: 15595806 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Pseudomonas aeruginosa # 6 495 5 491 492 508 52.0 1e-144 MTTLAQFEQLKAAGYNTIPVYRQRLADTETPLSVFARFKDQTQAYLFESVEGGENWARYS MIGLGESTVFSCNAGVLSIQHADGSVTQQNCLDPFQYIREFQKQFKVPAAKLLPDLPSFT GGLVGYLGYDAVRYIEPRLKNVPAADPITLPDLWLMLSKTVIVFDNLKDTLFLIVHADTE QSNAYEDAQQKLDQLEQLLATPVSLQARPHTPPHFESITGKAKFLETVEKVKEYIRAGDV MQVVPGQRMVSDFDGEALQVYRALRHLNPSPYLFLVQGQTITDKKPFHIVGSSPEILSRL ENGIATVRPLAGTRPRGKTKEEDIALEKDLLSDEKEIAEHLMLIDLGRNDVGRVSKIGKV QVTDQMVIERYSHVMHIVSNVQGEVRDDIDALDVFKATFPAGTLSGAPKIRAMEIIDEVE PVKRGVFGGAVGYLGWHGEMDMSIAIRTCVIRDKKVYVQAGAGLVADSNPESEWNETQIK ARAVIKAVELSSNGLIL >gi|333032514|gb|GL891912.1| GENE 3 2300 - 2968 545 222 aa, chain - ## HITS:1 COG:PA0608 KEGG:ns NR:ns ## COG: PA0608 COG0546 # Protein_GI_number: 15595805 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Pseudomonas aeruginosa # 11 221 15 226 272 162 39.0 6e-40 MSVAQLSKRDLILFDLDGTLVDSAADLYRSMNLSLQSLSWPLVTEAQIREWVGKGASKLC ESVLLHVFGKLDVEQHKVLLQKFVEVYGAELCVNTQIYPGVPEFLKHCQTLNIKMACVTN KPVKLAQGLLDELELSSYFQVVLGGDSLPERKPHPLPLLHCMESLKISASQSLMIGDSSN DIEAARRAGIDCIVVSYGYNHGENIYDCQPQQVVDSLAELIV >gi|333032514|gb|GL891912.1| GENE 4 3034 - 3663 743 209 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003263 NR:ns ## KEGG: ABBFA_003263 # Name: not_defined # Def: FHA domain protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 209 1 209 209 375 100.0 1e-103 MTWKLQAITGEFTGQEINVDRDMLVGRHQDADLLLQAAEISRRHAALLLKDQALWVQDLN SSNGTFVNDIRIEQEKQLHDGDIVQFASLKFSVFAPAQENTDLPEIEVEPVQTAPTQDLS DQGMPSIAERAAETEVSRDGMPQRVSVPKPAPIPEGVDIHAQPEQTPVAIEEPVSRVTEE KEQQKNASIGLVTIIILVILAVLAWLFFK >gi|333032514|gb|GL891912.1| GENE 5 3704 - 5980 1987 758 aa, chain - ## HITS:1 COG:PA1868 KEGG:ns NR:ns ## COG: PA1868 COG1450 # Protein_GI_number: 15597065 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulD # Organism: Pseudomonas aeruginosa # 32 672 46 619 776 395 40.0 1e-109 MALLNHQRPLWALLAAAPLIATVSSSAYAQTWKINLRDADLTAFINEVADITGKNFAVDP RVRGNVTVISNKPLNKDEVYDLFLGVLNVNGVVAIPSGNTIKLVPDSNVKNSGIPYDSRN RVRGDQIVTRVIWLENTNPNDLIPALRPLMPQFAHMAAIAGTNALIVSDRAANIYQLENI IRNLDGTGQNDIEAITLQSSQAEEIITQLEAMSATGASKDFSGARIRIIADNRTNRILIK GDPQTRKRIRHMIEMLDVPSADRLGGLKVFRLKYASAKNLSEILQGLVTGQAVSSSNNSN NSSNSSNPINSLIGNNQNSGSNTSGSNGASISTPAINLNGNSNSSNQNNITSFNQNGVSI IADNAQNSLVVKADPQLMREIESAIQQLDVRRQQVLIEAAIIEVSGDDADQLGIQWALGD LSSGIGLLSFSNVGASLSSIAAGYLSGGSAGAASAIANGANKGNGATLGLGNFDNSRKAY GALIQALKTNTKSNLLSTPSIVTMDNEEAYIVVGQNVPFVTGSVTTNSTGINPYTTVERK DVGVTLKVVPHIGEGGTVRLEVEQEVSAVQDSRGQAADLVTSKRAIKTAVLAEHGQTVVL GGLVSDDTSLSRQGIPGLSSIPYVGRLFRSDNRSNVKRNLLVFIHPTIVGDANDVRRLSQ QRYNQLYSLQLAMDKNGNFAKLPEQVDDIYNQKMTPPSIASKPKNYQQVPSGGKSSTITT PVAVEPTVQKQTLQLPDPEINRTKNTVTTTTLRPSTAP >gi|333032514|gb|GL891912.1| GENE 6 6022 - 6858 672 278 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00291 NR:ns ## KEGG: ACICU_00291 # Name: not_defined # Def: putative general secretion pathway protein # Organism: A.baumannii_ACICU # Pathway: Bacterial secretion system [PATH:abc03070] # 1 278 1 278 278 509 100.0 1e-143 MKVWIDKLQQLQWQKLDRLSVVVLAILILWLCWKLASFFWLVIAPPQLMQFDRVELGSQQ PQIPNISTFSLFNEPSANAAQESVNLELQGVMVGYPNRFSSAVIKIDNTAERYRVGETIG STSYQLAEVYWDRVVLSQGNGSTRELQFKGLPNGLYQPMTPDASQQSATPSQSTEPMNTA QQALGQAIQQMQGNREQYLRDMGVSGNSGEGYEVTERTPTALRNKLGLRPGDRIVSLNGQ TVGQGQTDVQLLEQARRAGQVKIEIKRGDQVMTIQQNF >gi|333032514|gb|GL891912.1| GENE 7 6858 - 7601 628 247 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00290 NR:ns ## KEGG: ACICU_00290 # Name: not_defined # Def: putative general secretion pathway protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 9 247 9 247 247 451 100.0 1e-125 MKKKSKQWKWWFFALIAFLIFIILQIPATWLISKFSKNNQTVHNVSGNIWQGQADWHRGA LRGTIHWKTRPLDLLLLRFAADVDIHSGNTQLTGIMAYGFGKKVIVRDMNGQIAPETLKQ IVNWQWPVNSIQLKDIQFNYKKEQGFAAVDGQLHWGGGALIYNIGDRQDRMNMPSLSGQL TDQNGQLQVDIRDQRNQKMANLLLDANMMLDVQLTQRLLLNVPSYDGKAGLDTFVISSRQ PLLQGGN >gi|333032514|gb|GL891912.1| GENE 8 7934 - 8260 558 108 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003266 NR:ns ## KEGG: ABBFA_003266 # Name: not_defined # Def: putative DNA-binding protein (histone) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 108 1 108 108 166 100.0 2e-40 MKPDISELSVEELKRLQEEAEALIASKKDQAIEDAYNQIIEIAENVGFSVEQLLEFGAQK RKKTTRKSVEPRYRNKNNAEETWTGRGKQPRWLVAEIEKGAKLEDFLI >gi|333032514|gb|GL891912.1| GENE 9 8455 - 8895 424 146 aa, chain - ## HITS:1 COG:VC1938 KEGG:ns NR:ns ## COG: VC1938 COG0824 # Protein_GI_number: 15641940 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Vibrio cholerae # 4 135 5 140 149 85 35.0 2e-17 MKELSVYPVIYDQKVAWGDMDAFGHVNNVQYYRYIESSRILYMENVNILTPNIYTVVASS QCKYLKSVFYPDVLKVGVRVEELRKSAFRMAYILWSESQQQIVATGEAVMVCVNKMTGLK CEIPSEVKSKIIELEKSVGHDLIHLA >gi|333032514|gb|GL891912.1| GENE 10 8903 - 10096 1041 397 aa, chain - ## HITS:1 COG:no KEGG:ABSDF3265 NR:ns ## KEGG: ABSDF3265 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 397 1 397 397 652 98.0 0 MKHLLWVYFLISLVLFAALALLSYGYGMGYVYIYWRQLQLQTNVWGLVFTFVVMSFIAQV IWLWIKRYSSREQRKRENIFQFKNLHPYEQLGIVWLLEAAEDQRVFIERVFTQSGLLKNI IDAKFLVLSGDYQKALEALDQSPPMAFELAELQRIEIFLAQNEAERALTHLEFLYQHQLS PWLEEIETAYQQRLTALWGQLALQQPWVYLRSMKYGLLDAEHRDLWLQQLLQQFDQASID DLQALQQRYLDLESEIQTRPYSSKLLWLKLLARMPEMSIQHEVLTLHLLKEQFDPDVFYL WFQQQLLKQVPDYADVEEKINQFESQYMNLPVLTFAKWHVYMATGRQAEAEILLSLYPDN ILMSYLRIKSTLKEDDELIKQLNLIFENDANFLKFKI >gi|333032514|gb|GL891912.1| GENE 11 10106 - 10945 672 279 aa, chain - ## HITS:1 COG:no KEGG:ABSDF3264 NR:ns ## KEGG: ABSDF3264 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 279 1 279 279 414 99.0 1e-114 MRKLVSIIILLGIAWVAKLSYDMWQISRTVPELQQSLLQSEQQYANLNDQLVALQRQIQN QPSHNSKTTPLATTEVVQTGIAPTVLIKQKLELIQFAIDQQQFIYAVDHLTQLQQTLPQY GIAPALQHSLNQALEQDKQAIQQFVLAQNQRHQLIDDLLQNIDKNIQQALQQPKFEMDQS EAVSWWKKWFRIEKVETPSINLMNRSVVLKEVQLRLLIAEQALNQGKMAEYQNELQTVMQ KLNELPDATSQQLKNRIAKVAHLSVVPVPKLSTLGLIGS >gi|333032514|gb|GL891912.1| GENE 12 10954 - 11721 568 255 aa, chain - ## HITS:1 COG:PA5259 KEGG:ns NR:ns ## COG: PA5259 COG1587 # Protein_GI_number: 15600452 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III synthase # Organism: Pseudomonas aeruginosa # 6 164 9 167 251 83 36.0 3e-16 MLFINTRPDSRAAELTHALQNKGFQVESLPLLELVAQPFSESLSQLYQQLTGAQAIVVVS PTAVDVGMQYLTQSGLKIDELKHIQWIAVGQATANRLHDYGIEAHVPEVETSEGMLNLPL LHHMQKSGSVAFWRGEGGRQFMMETLQQQGIQILNFVLYRRQCPQASYSTFKHLTQNSNY NLDKWLVLITSEASWKYWLELCLKNKAQPDCVYLVLGPRLFQLVKDYRDQQQAHFHIIQL ENLSPSGMIHHIQAL >gi|333032514|gb|GL891912.1| GENE 13 11726 - 12655 994 309 aa, chain - ## HITS:1 COG:STM3938 KEGG:ns NR:ns ## COG: STM3938 COG0181 # Protein_GI_number: 16767209 # Func_class: H Coenzyme transport and metabolism # Function: Porphobilinogen deaminase # Organism: Salmonella typhimurium LT2 # 8 309 11 312 318 355 61.0 5e-98 MLEFMKTLKIATRQSPLALWQAEHIRARLQELHPDLTVELVKFVTQGDKILDTPLAKIGG KGLFVKELEAALLDGRADLAVHSMKDVPMALPEGLTLAVICEREDPLDAFVSNQFEKFAD LPQGAKVGTSSLRRKSQILKQRPDLQIIDLRGNVGTRLAKLDDGQYDAIILASAGLKRLG LAERIRHCIEPSVSLPAVGQGALGLECRADDQEVLTLIQPLLHPETDVCVRAERAFNAYL EGGCQVPIAGYATLQDGKIHIEGRVGSVDGQTLLRAELTDEANNAQQLGENLARNLLDQG AGDLLKALY >gi|333032514|gb|GL891912.1| GENE 14 12744 - 13478 529 244 aa, chain - ## HITS:1 COG:PA5261 KEGG:ns NR:ns ## COG: PA5261 COG3279 # Protein_GI_number: 15600454 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Pseudomonas aeruginosa # 1 244 3 248 248 208 46.0 6e-54 MLICDDEPLAVERLSRLVSKMGHEVVATAHHGQDALEQARLHHPDVILLDIQMPGMNGLV CAEQLSQLNPRPAIVFCTAYDQHALEAFKSQAQAYLLKPIDPQELEQTFKQLTQLTQAQL SALPKPELLQDLKTQRHQIAAKTYRGVELIPVENIYYFLADQKYVTVRHKNGSVLIDETL KELETEFADQFIRIHRNALVSIAYLDGLELVSSGQYQVRLRGLDERLSVSRRHLSTLRER IHQL >gi|333032514|gb|GL891912.1| GENE 15 13545 - 14684 744 379 aa, chain - ## HITS:1 COG:PA5262 KEGG:ns NR:ns ## COG: PA5262 COG2972 # Protein_GI_number: 15600455 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Pseudomonas aeruginosa # 70 374 53 349 358 175 35.0 2e-43 MWSWWLSKIKKSISLAEAQQTKLFSTAYRNQNSSYFFTKIDRWQHLLELIIASNVLALVL ALAEAQSWHALNGSRLLQYIVFINWVILSFFALVEHFQDFFSQLQQKYALVIGFVMLQAI VVVTTIISNFFQFGVLKKTSVIAQDWSIYFTNVPLYLSYGILLGAFCLRYLYVREQWLHQ QYAELNARIQAMQARIHPHFLFNSLNNVVSLITIDPDKAESMLISLSRLFRASFQELKLV SLHEEIELSKQYLMIEQIRLGERLKVEWKVEIEPLQLKQVTIPLLTLQPLLENSIFHGVE PMMGKATIGVLVEILQNQVSIVITNPYTHDTINSRKGHGIALENVKQRLKAYYGNSVRFQ VYKGEALYTTIMSYQYQSK >gi|333032514|gb|GL891912.1| GENE 16 14675 - 16108 1803 477 aa, chain + ## HITS:1 COG:PA5263 KEGG:ns NR:ns ## COG: PA5263 COG0165 # Protein_GI_number: 15600456 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Pseudomonas aeruginosa # 15 474 5 463 464 713 77.0 0 MTTSSNPPNSAAPNQTSGMWGGRFSEATDAFVAEFTASVQFDQRFYKQDIAGSIAHATML AKVGVLTEAERDDIIEGLSTIRAEIEAGTFEWRIDLEDVHMNIESRLTQRIGITGKKLHT GRSRNDQVATDIRLYLRDEIDDILGLLERLQKGLLGLAAKNVNTIMPGFTHLQTAQPVTF GHHLLAWFEMLVRDTERLQDCRKRVNRMPLGSAALAGTTYPIDRAYTAELLGFEAVSENS LDAVSDRDFAIEFNAAASLIMMHLSRMSEELILWTSAQFKFVNIPDRFCTGSSIMPQKKN PDVPELIRGKSGRVFGDLISLLTLMKGQPLAYNKDNQEDKEPLFDAIDTVRGSLMAFADM IPALVPNVEIMREAALRGFSTATDLADYLVKKGVAFRDAHEIVGKAVALGVAEEKDLSEL TLEQLQQFSDLITADVFDKALTLEASVNARDHIGGTSPKQVEAAIARAHKRLEQLYA >gi|333032514|gb|GL891912.1| GENE 17 16118 - 16387 337 89 aa, chain + ## HITS:1 COG:PA5148 KEGG:ns NR:ns ## COG: PA5148 COG2924 # Protein_GI_number: 15600341 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: Fe-S cluster protector protein # Organism: Pseudomonas aeruginosa # 1 88 1 87 90 94 52.0 6e-20 MSRQVFCRKYQKEMEGLDFAPFPGAKGQEFFENVSKQAWQEWLQHQTTLINEKRLNVFEP EAKKFLEEQREKFFNNDESVEKAEGWKPE >gi|333032514|gb|GL891912.1| GENE 18 16701 - 17405 997 234 aa, chain - ## HITS:1 COG:PA5365 KEGG:ns NR:ns ## COG: PA5365 COG0704 # Protein_GI_number: 15600558 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Pseudomonas aeruginosa # 2 231 7 236 242 255 59.0 5e-68 MLSHHISSQFNEDLQDVNTKFMTMGGLVEQQVANAIHSLLDTDANLAIDVQFKDNAVNQY ERDIDEGLTLILARRHPAAIDLRMVIAMSKANTDLERIGDEAAKIARIAQNLCEEGGSPR GYMETRHIGNQVRVMIHDALDAFARLDADQALRVLLADADIDREYQSATRTLMTYMIEDP RHIARVINVMWVLRSLERIGDHARNIAEQVIYMAKGFDARHTKIEEIEAKVHEK >gi|333032514|gb|GL891912.1| GENE 19 17531 - 18862 1477 443 aa, chain - ## HITS:1 COG:PA4974 KEGG:ns NR:ns ## COG: PA4974 COG1538 # Protein_GI_number: 15600167 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Pseudomonas aeruginosa # 17 440 31 451 482 162 29.0 2e-39 MLVAGLWSFTSSSFALDLVETYERAKLNDPTWQANQQQFEADQLNLGLATGALLPTVTLS GNITRNRQTVKRSNFPGVDQEGLSDALVSNTSTTKQATLSARQPLFRMDAWEGYKQVKTS VALSEITLRLQKQDHVLNVAEAYFNVLRQQALTAAYLQEEKALLEQLNMMSAKLKEGLVA RSDVSEANAQYQNARANRIATNVQLLLAQEQLSEYIGPYQDKLAVLRSDFIFQKPYPAQL DEWLGLAQQQNLKIQQARLQKRYAEDQRRVEKAALYPQIDAVASYGYTKQTPETLISTDG KFDQVGVEMNWNLFNGGRTRTSIKKASVELNKAQAQLDAAIRRANVDVKSAFMQVDTDRA KLEARKAAMDSSALVSQASKASYNEGLKSMVDVLLAQRNAFSAKQDYLNAQYDYLLNVLR LKAAVGQLGEKDLVELNSWLTYQ >gi|333032514|gb|GL891912.1| GENE 20 18958 - 19863 942 301 aa, chain - ## HITS:1 COG:BH1931 KEGG:ns NR:ns ## COG: BH1931 COG0697 # Protein_GI_number: 15614494 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus halodurans # 14 282 8 267 304 114 32.0 3e-25 MISLIKNSSYGGTIAILVASFLWGTTGTAAAFAPTLGPLAIGAVAMGGGGLLQALIASRA IREHRQFIGRNISIILLGVVAVGIYPLAFYSSMHYAGITIGTVVSIGSAPLIAAVLERFF DRKVLSKTWFLSFVLGVVGVSLLSMGESHAAQESTNEWNKIFGIFLGLVAGATYSLYSWA AKRLIDRGIAAKAAMGMIMGGGAVILLPTLLITGGGLLQSSTNLLVAGYMMLIPMFLGYL LFGFGLKTVNASQATTLTLFEPLVAAIFAIVLVGESVSWIGWAGMFLIFICILMLSKPEN T >gi|333032514|gb|GL891912.1| GENE 21 19856 - 20437 621 193 aa, chain - ## HITS:1 COG:PA3034 KEGG:ns NR:ns ## COG: PA3034 COG1309 # Protein_GI_number: 15598230 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 7 186 6 180 185 92 39.0 4e-19 MNDRTARQKILDAAATLFYNDGITATGINTVTAKADVAKMSLYNNFSSKGELVDAYIAAR HQEWLDLYQKRLEKTKTAKEAILAVFDAYQDHAEFAYEKGFRGCGLLNAAAEFPANSSGR NAVRQHKEQVEAIVAEHLNRLLKDSQRVSYIASQLSFLLEGSMARAGLEGSSRQLQLARQ MAEDVLDRECQHD >gi|333032514|gb|GL891912.1| GENE 22 20563 - 21627 869 354 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00275 NR:ns ## KEGG: ACICU_00275 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 354 1 354 354 656 100.0 0 MMSMCGALLLTGCNKTSQQDQTVSKEQKSTAQKATEQRDSSCLQIMVAMHTINQNSKIED LNQINEKLKTCVPSLKNEEQLKLIDASTTMYQRFIKQDYTEKTGRAFEAFGYAVLEQKQD LKKVIQSQKKLFAQLSPRDQYLLQHEGQAYIELLYQGEGMFTYRRQPNYLVDVFSKALPA DQKEFLSRMAKDNQDIFYNDGALAVSWKELTERALFWEKFIQKYPKSYFINDAKLLFNEY RYFIFFGLDNTPVSNEYAPNTWFDPDALQQIRFLSTQSQSSLAKPAQQFLKFIATPVDER NKQFKIDLTDENGQKKSTYQIVHEQLEQLLKFDSPWNTEVYRDCHIDAVCIDTN >gi|333032514|gb|GL891912.1| GENE 23 21886 - 23763 2319 625 aa, chain + ## HITS:1 COG:PA4973 KEGG:ns NR:ns ## COG: PA4973 COG0422 # Protein_GI_number: 15600166 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Pseudomonas aeruginosa # 17 625 13 627 627 1008 77.0 0 MNQLTNLSSAEISAQHEQDAKDLTRILPASKKVYIEGSRPDIQVPMREISLTDTPTGLGG EHNPPIMVYDTSGVYTDPNVQIDLNKGLPSVRQKWIEERNDTDVLSGLTSKFGQERLKDI RTADIRFAHIQNPRRAKAGKNVTQMHYAKQGIITPEMEYIAIRENQRQREAVDMRQHPGQ NFGAKNLKEITPEFVRQEVAEGRAIIPANINHPELEPMIIGRNFLVKINANIGNSALGSS IDEEVAKMTWATRWGADTIMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGVAE NLTWEIFKDTLIEQAEQGVDYFTIHAGVLLRYVPLTANRLTGIVSRGGSIMAQWCLAHHE ENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIQDANDEAQFSELKTLGELTHRAWEHDV QVMIEGPGHVPMHMIKENMDLQLEVCKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWY GTAMLCYVTPKEHLGLPNKKDVKDGIITYKIAAHAADLAKGHPGAQVRDNALSKARFEFR WDDQFNLSLDPDTARSMHDETLPKEAHKSAHFCSMCGPKFCSMKITQNVRDYANNLTNSD SEVEEGLKAMKEVYQEQGQKLYHKV >gi|333032514|gb|GL891912.1| GENE 24 23839 - 24465 333 208 aa, chain + ## HITS:1 COG:VC2435 KEGG:ns NR:ns ## COG: VC2435 COG0494 # Protein_GI_number: 15642432 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Vibrio cholerae # 8 197 10 197 208 168 43.0 6e-42 MSIVERPSYTSKDVEVTSREPLFSGFIQVEKVSLRHRLFNQSEYTPVLQRELVHRPEAAG VLLYNDQKQQFALIEQFRVGALDDSHSPWQLEIIAGVLDGNESPESCIRRESLEESGCEV QDLEHLFSFYPSAGACSELFHLYVAETNLPAVGGVFGVDNEGENIQLHLFSYSEIQTLLD SGRLRNAPVIMALQWLAQHSKTIINPKR >gi|333032514|gb|GL891912.1| GENE 25 24470 - 25282 551 270 aa, chain + ## HITS:1 COG:PA4969 KEGG:ns NR:ns ## COG: PA4969 COG1409 # Protein_GI_number: 15600162 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Pseudomonas aeruginosa # 14 270 15 272 272 182 33.0 6e-46 MTFQVSTLSQKNHVIIQITDTHLLEYPQLEFVGMNPEESFHAIIQQILKQHPEADAIIHT GDLAQAPTPITYKRYINFMQTLGLPFFQTLGNHDNVDHFPLHNENHQQPVVVGLGNWRVI MLNSAVKGKVDGHLSSEQLENLANLLEQFADHPVLLACHHHPFAMKSKWIDHHKLQNSNA LLDTLSPFQNVKALVCGHVHQDSLNIWQGIEFFSTPSTSVQFKPFSNDFALDQNAPGYRY IRLNNDGSFETKVFRLENFKTRINTDISGY >gi|333032514|gb|GL891912.1| GENE 26 25493 - 26029 696 178 aa, chain + ## HITS:1 COG:VC0596 KEGG:ns NR:ns ## COG: VC0596 COG1734 # Protein_GI_number: 15640617 # Func_class: T Signal transduction mechanisms # Function: DnaK suppressor protein # Organism: Vibrio cholerae # 43 178 13 148 148 173 65.0 2e-43 MANDNHNQVLDEHTEVVVEGDKASAKRARKVKPKTSDVGSTASLFGIAPYQPKKNEEYMS EGQLEHFRQILQAWKAELMSEVDRTLNTMQDESTALPDVNDRATQEEEFAIELRTRDRER KLIRKIEQSLEAIKNEDYGFCETCGIEIGLRRLEARPTATLCIDCKTLAEIKEKQNNG >gi|333032514|gb|GL891912.1| GENE 27 26032 - 26964 704 310 aa, chain + ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 26 300 2 288 295 270 51.0 3e-72 MTVKNSPAELSSALANQRNDVPLIRYSGRFAPSPTGPLHFGSLITAVASYCDARAHQGRW LVRVEDTDIPRIYPGSEDHILASLEAFQFDPDAEIIFQKDRLDIYESVLDQLKKEGLVYA CQCTRKMLGSNAIYAGTCRDLHLDFQHQAIRVKVQDQPICFDDRLQGLHCSNLEHDLGDF VLKRRDGIINYQLAVVVDDYLQGITHVVRGADLLDNTERQIWLGQLLGYPKLSYMHLPLA MNDQGQKLSKQNLAHALDLTKAPELLQQAIQALGQPQVDLDRPEVMLKQAVAQWNVDLIP HGQQLCGTYL >gi|333032514|gb|GL891912.1| GENE 28 27014 - 28210 1361 398 aa, chain - ## HITS:1 COG:VC2402 KEGG:ns NR:ns ## COG: VC2402 COG0772 # Protein_GI_number: 15642399 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Vibrio cholerae # 8 383 6 378 398 316 45.0 6e-86 MAGLAQTTIQKINHWYERILPKWPAEVTPRNVLIFCVVALLCIGSVMVASASMPYAEYMH ENPFHYVIRHGISIVAAGVVAYLTYRISLNTWFKNTFPLWLLTMVLLLAALAVGSEVNGS TRWIKIGGFTLQPTEVAKVMMAIFTADYVVRRAKEVRTHWKGLLRLSGVMAITVGLIIAE PDLGATVVIVMMMVGVFFLAGAPPTQFLIMLGAIVTGIVFLILFEPYRFQRLISFTDPWA DPLGVGYQLSNALMAFGRGEWFGTGLGHSVQKLSYLPEAHTDFMLAVLGEEFGFFGISIV IGLSFLMLACCIKIGHRALKHHYLRAGYLAYGISIIFLLQILVNAGMNMGLMPTKGLTLP FISYGGTSLMMCAAMISLILKIDASTQEVNPEREESNF >gi|333032514|gb|GL891912.1| GENE 29 28235 - 29581 1559 448 aa, chain - ## HITS:1 COG:PA4414 KEGG:ns NR:ns ## COG: PA4414 COG0771 # Protein_GI_number: 15599610 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Pseudomonas aeruginosa # 2 447 3 447 448 431 53.0 1e-120 MLIQRGGLKVVAGLGISGVSAVNFLHEQGYQVAVTDSRPTPPGHDQIPAGVKTSFGQLDQ ELLLQAEEIILSPGLAPQLPEIQAAIAKGISVVGDIQLLRRATDVPIVAITGSNAKSTVT TLIGLMAKDAGKKVAVGGNLGRPALDLLKDQPELLVLELSSFQLETTSHLNAEVAVVLNM SEDHLDRHGNMLGYHQAKHRIFQGAKKVVFNRDDALSRPLVPDTTPMQSFGLNAPDLNQY GVLRDADGTLWLARGLQRLIKSSDLYIQGMHNVANALACLALGEAIGLPMESMLETLKRF KGLEHRCEYVKTVRDVRYYNDSKGTNVGATLAAIDGLGAAIEVKKGKVALILGGQGKGQD FSPLRSSIEKYAKVVVLIGEDAPVIEQAIQGATKILHAATLKEAVELCQRETQAEDVVLL SPACASFDMFKSYNDRGQQFVACVNSLV >gi|333032514|gb|GL891912.1| GENE 30 29742 - 29993 265 83 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00267 NR:ns ## KEGG: ACICU_00267 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 83 1 83 83 151 100.0 7e-36 MLQYLIIAVLVIWSAIVVFKKVFPKTANSAFSALSVFCEKQGWATLAKWLKPKMTFGCAG GCGCSSEDKPTNTIQEIKPVKWQ >gi|333032514|gb|GL891912.1| GENE 31 30014 - 31867 2044 617 aa, chain - ## HITS:1 COG:RSp0251 KEGG:ns NR:ns ## COG: RSp0251 COG0370 # Protein_GI_number: 17548472 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Ralstonia solanacearum # 5 612 15 617 621 720 63.0 0 MSDALRIALVGNPNCGKTSLFNHLTGTRQKVANYAGVTVERKVGHFQLPSGRSVRVLDLP GTYSLNATSPDEAITRDVCLGKIAEEGQQDAFLCVVDATNLKLHLGLVLEMIELGRPILL VLNMMDEARRRGIQINTQKLSQRLGVPVVETVAVRNAGIENLLHALDQEKYSVPQTELSG LTGTHHQKIDMIFKDVVHYVDQEDKRTDFLDRIFLHPVLGLLSLAIMMFIVFQAVFAWAA PFMDGIEGFFGWLGEVVGSVITQPLLHSLVVDGIIAGAGGVVVFLPQILILFFFILVLEE SGYLPRAAFLLDKLMFQAGLSGRAFIPLLSSFACAVPGIMATRSISDPRDRFTTIMVAPL MTCSARLPVYALLIAAFIPEKMVWGIFNLQGLVLFGLYMAGIVSALCVSFLMKFFQKDKS QHALLLELPSYRFPDLKSVGIGLLDRAKIFLKRVGGIIFALSILLWFLCTFPQPPEGATL PAIDYSFAGMLGHLIQPLFAPVGFNWQICIALIPAMAAREVVVAALGTVYALSATDEDAV AQGLSHLISADGTGWSLATGLSLLVWFIYAPHCLATLATVRRETGSWKHVAAMTAYLFGL AYFASFVTYQIASHYWG >gi|333032514|gb|GL891912.1| GENE 32 31864 - 32163 344 99 aa, chain - ## HITS:1 COG:RSp0252 KEGG:ns NR:ns ## COG: RSp0252 COG1918 # Protein_GI_number: 17548473 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Ralstonia solanacearum # 13 94 1 78 103 62 43.0 1e-10 MYTSKKGLGSDAVRLSALKVKQAATITKVNRIEVESEQQDLVAIRLESLGFVPGTRVEVI TKGVFGGDPILIQIGFTRFALRKAEAEKIEIQVEEGVPA >gi|333032514|gb|GL891912.1| GENE 33 32271 - 33191 872 306 aa, chain + ## HITS:1 COG:PA3738 KEGG:ns NR:ns ## COG: PA3738 COG4974 # Protein_GI_number: 15598933 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Pseudomonas aeruginosa # 33 306 22 298 298 279 54.0 4e-75 MINKKPRIPSPVQIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHKKNRLPDW TSDDISDVLIELTKVGKSPRSIARCLSALRQFYKFLREQKLRSDNPVATHHSPKIGRALP KDLCEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRIT GKGNKERLVPLGQYACDWVERYLNEARPQFYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHE KHHPRG >gi|333032514|gb|GL891912.1| GENE 34 33338 - 34153 715 271 aa, chain + ## HITS:1 COG:PA3737 KEGG:ns NR:ns ## COG: PA3737 COG1651 # Protein_GI_number: 15598932 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Pseudomonas aeruginosa # 39 267 9 236 242 148 37.0 1e-35 MSFTRSQIFLACALASSLLFSACSKENKPQKEDALTATAPATGEASTIIERNAKQRLIET LQKQFKNANINVKILDIKPTEVPNLYWVNLEGMTSVYTTSDGKYLIQGDVIRLGDKELHN IGDSLQASENKKHLAALKNEDLIVYPAKGGKAKHVIYVFTDASCPYCHKLHEHLAEINEK GIEVRYIAWPRGEQFMPTMEAVWCSADRKAAFDQAVQGISIPPAQCKNPVREQYQLGLNM GVNGTPAIYNVDGEYLGGYLTPDELIKRLDK >gi|333032514|gb|GL891912.1| GENE 35 34386 - 35699 1903 437 aa, chain + ## HITS:1 COG:PA3736 KEGG:ns NR:ns ## COG: PA3736 COG0460 # Protein_GI_number: 15598931 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Pseudomonas aeruginosa # 5 436 1 434 434 502 59.0 1e-142 MECDVKPVRLAILGLGTVGGGALKLLQENAAEIKRRTGREIQITHVGTRRPRPDLELEGI KQSADLLDIVRQPDVDVVVEVMGGIHPAYEIIMEAIKHGKQVVTANKALLAEHGNELFKA AEDNAVQIAYEAAVAGGIPIIKVIREGLAANHIEWLAGIINGTGNFILTEMREKGRAFDD VLKEAQELGYAEADPTFDVEGIDAAHKLTILASCAFGIPLQFDKVYTEGISKITAQDVKY AEELGFRIKHLGIARRAEKGIELRVHPTLIPDEQLIANVNGVKNAVLVQANAVGPTLYYG AGAGAGPTASAVVADVIDIVRDISYTEDGAGTIPQLAFEALTNMPILSREEMTTGYYIRL NAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDALAQIQAL PAIRGEIVRIRLESLDS >gi|333032514|gb|GL891912.1| GENE 36 35755 - 36894 1662 379 aa, chain + ## HITS:1 COG:TM0546 KEGG:ns NR:ns ## COG: TM0546 COG0498 # Protein_GI_number: 15643312 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Thermotoga maritima # 9 355 4 328 348 384 59.0 1e-106 MSNANRYTGLVDRYRDRLPVSATTRAISLGEGNTPLIKLENIPRIIGKDVEIYVKYEGLN PTGSFKDRGMTMAVTKAVEEGSKAIICASTGNTSAAAAAYAARAGIKAFVLIPEGKIAMG KMAQAMMYGAITMQIRGNFDDGMRLVKEVADQAPVTIVNSINPYRLQGQKTIAYEIVEAL GRAPDYHCLPVGNAGNITAHWMGYTEAVANQPADQFEQVVYDAATDQFTGPKPEGLPTMV GYQASGAAPFLRGAPVEKPETVATAIRIGNPQSWNHAKAVVRDSKGWFDELQDSEILEAQ RLLSMYEGVFVEPASAASIGGAIRDIKAGKIAEGSVIVCTVTGNGLKDPDTAIKQCADAV MLSIDATMDQVKDSILSNM >gi|333032514|gb|GL891912.1| GENE 37 37001 - 38023 1104 340 aa, chain - ## HITS:1 COG:RSc1609 KEGG:ns NR:ns ## COG: RSc1609 COG1686 # Protein_GI_number: 17546328 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Ralstonia solanacearum # 53 337 57 341 375 211 46.0 2e-54 MHVLSMSILLSLSSTSFAELVNNPSSGSTGTASLNWSAADASQLLNDEDDEPTPQGSTSV TTTLRGSNAPRVITSTPKVAPIRDTVGYNAQPSVSARAALVMDAQTGEVLYSKNTNASVP IASITKLMTAVVTADARLNMSEEITLEQIDFAGAGGKNSSSTLRVGDKMNRAEVLLFALM KSENPAAAALARTYPGGRAAFVAAMNAKARALGMNATHYYESTGLDPRNVSSARDLGILA STASQYGLIRQFSTTPTYDFNLGYRVLKSNNTNALVRNGGWNINLSKTGYINEAGRCVVM HTTVNSRPAVIVLLGEPSTQARNNDATNLLGWLSNLPKRI >gi|333032514|gb|GL891912.1| GENE 38 38260 - 38895 814 211 aa, chain + ## HITS:1 COG:PA2586 KEGG:ns NR:ns ## COG: PA2586 COG2197 # Protein_GI_number: 15597782 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 209 1 210 214 234 56.0 6e-62 MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGI GGVETTRRLLQTAPETKVIAVSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQ GGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMVVNCISAQEIADKLFVSVKTV NTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP >gi|333032514|gb|GL891912.1| GENE 39 38906 - 40474 1147 522 aa, chain + ## HITS:1 COG:XF2546 KEGG:ns NR:ns ## COG: XF2546 COG0642 # Protein_GI_number: 15839135 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Xylella fastidiosa 9a5c # 21 522 116 624 629 209 30.0 9e-54 MQFPLNSSLSHTIFRLGTWYGLYRLIIAVSLNIILVLTDAQTDNSLQQPALYSYTLLGYS LLSLVQLLCFKFIATQATRQLILFFIVDIICLSLLTFSVGEPNLQLSLLYVIAIFTSAIL LSARMSLLITLLAVIAVIYQRFVGSLFDYNNLNTIGNSALLAFLFFVVHGIGQIAVQRFK LLEALTFHQSIELYQLQNINRYILEQIEEGYLVLDENYDIVVSNPAACSLLGIPPQFANE KYPLAKWHADLFEILKFGDLKEGDRFIFESRLSAYSINIKVQHLLVPQQTLTLLILQDAQ QINQQAQQLKLAALGQLSASIAHEIRNPLAAIVQANELLKDSDPEQQNTLRHMIGKQTKR IDSIVQDTLGLARSERTHPIQIDVKHFIVTLLEEDLFDVKHSIQLKISDSSLKFLFDEKQ LRQVMINLVRNALRHNAPDSPYITINIHSQTNKIYIDVIDYGEGVSKRDISQLFKPFFST EINGTGLGLYLSHSFCEANHAKLTYVEQKQGACFRIECPIIY >gi|333032514|gb|GL891912.1| GENE 40 40499 - 41920 1488 473 aa, chain + ## HITS:1 COG:PA4547 KEGG:ns NR:ns ## COG: PA4547 COG2204 # Protein_GI_number: 15599743 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains # Organism: Pseudomonas aeruginosa # 1 466 1 445 445 442 50.0 1e-124 MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLP DGSGIDLVKHVSQNYTNTPIAVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKA LNRQKVEHDAAENALENKLLIGRSLPIQQLRIAIKKIARSQAPVFVTGESGTGKEVVANL VHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFR IHVMDLILPPLRERGEDVLLLANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVREL RNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASAAQSIQTTVAAPQVVKKLPSEGLE RYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV >gi|333032514|gb|GL891912.1| GENE 41 41924 - 43063 953 379 aa, chain - ## HITS:1 COG:XF2704 KEGG:ns NR:ns ## COG: XF2704 COG0793 # Protein_GI_number: 15839293 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Xylella fastidiosa 9a5c # 2 353 23 393 508 182 32.0 1e-45 MCCSQLAFAAPVVKEKLSSLHPDSPESEESYAEVPIESIQQFVQIYGIVRDNYVDEKSDD ALFLQAIKGLVSGLDRYSRYLSAEEYRQLIQYTEGDLASVDFVLSPESHVHKWMIRDLKT GSDSYKLGLRNGQTILKIDNQELKNLTHDQVLGLLYGSIGSTLQVQTEESNSPISLVRNK KIETDIEPVMLHNQVLVLKIRVFQQDTANEIKRLIEENSSSRLKAVLIDLRNNPGGLLSA AVESADLFLNHGIIVSTKSRSEGNQQFQALPGNDFQNIKVGILINHRSASAAEVFTAAMK EHQRAWVMGEKSYGKGVVQKLFPLPSGAALQMTVSHYYTPNGNMIEGQGIQPNQTYPLPP EMKEEVYLDRVADLLLKRK >gi|333032514|gb|GL891912.1| GENE 42 43124 - 44671 2273 515 aa, chain - ## HITS:1 COG:PA5131 KEGG:ns NR:ns ## COG: PA5131 COG0696 # Protein_GI_number: 15600324 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglyceromutase # Organism: Pseudomonas aeruginosa # 5 513 2 514 515 669 67.0 0 MTDATAGKIPHVLVIMDGVGHREAIEDNAFLAAKTPNLTAMKAKHPNSLISGSGEDVGLP DGQMGNSEVGHMNLGAGRVLYQDFTRITKDIRTGAFFEHEVLVDAVEKAKAAGGAVHIMG LLSEGGVHSHEDHIVAMCELALKRGAKVYLHAFLDGRDTPPRSAQPSLEKLDALFAQYEG KGRIATMIGRYFAMDRDNRWDRVEQAYRLLTEGEAVRTATTAVEGLELAYAANENDEFVK ATRIGEIAKVQDGDSVVFMNFRADRAREITRAFVEKDFAGFERKVVPNLSKFVMLTRYQA SIDAPVAYMPEELKNSLGEYLSSLGKTQLRIAETEKYAHVTFFFSGGREDEYPGEKRILI PSPNVATYDLKPEMSAYEVTDELVKAINSGEYDLLVVNYANGDMVGHTGVFDAAVKAVEA VDTCLGRVYEAVMAKKGHMLITADHGNVEQMQDYESGQVHTQHTTELVPFIYVGPTQATI AEGGVLADVAPTILNLMQIPVPAEMQGRNLITLSA >gi|333032514|gb|GL891912.1| GENE 43 44797 - 45867 1079 356 aa, chain - ## HITS:1 COG:PA3827 KEGG:ns NR:ns ## COG: PA3827 COG0795 # Protein_GI_number: 15599022 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 9 355 6 354 355 184 33.0 2e-46 MLARRIVAKYVTKTTALAMFGTTIVLSVLQILFTYLGELGELKPDYNAWQAFIYVLWGAP RYLYEILPISALIGAVIGLGALASNSELIVMRSVGISLWRIVGWVMRSALLLIVLSFALS EWVVPYTNEKAQSVKSHRSVAALGEVKGYWSREGQRFIYIDYANSQGNLRDIQVVDFNKD YHLQSLINAEQGKFIQDGQWTLQKASQMDILTDGNSILNNHDQQSLGLALQPKYVHMVTL DPEDLSPSQLISFMRYMDEYSQVPKTYQLAFWQKVASPFSLITLVLVACSFIFGPLRQQS MGFRLVIALFIGLGFYYLQDFLGYASLVYAPSPAWFVLMPIILMFGAGSYLLYRAR >gi|333032514|gb|GL891912.1| GENE 44 45867 - 46889 1003 340 aa, chain - ## HITS:1 COG:PA3828 KEGG:ns NR:ns ## COG: PA3828 COG0795 # Protein_GI_number: 15599023 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 1 302 27 330 372 182 34.0 6e-46 MGGRLIKYFGVAAQGRLDASILFSIIGYRLPEFLTLILPLGFFIGLMLVFGRLYVDHEMA VLNGSGVSRHQLARLLIPMTLVYMVCQSVLMLWMTPWGLREFEKLTTTQAVRTGFDLVRP REFISSGPYTIYAGSLSEDRKNLKDIFFYQRAAKEGKPDVMILAKEATRVEVANDTANVV DLVQGRRYEIFPGQPKYTQAEFQSYRLRLENDKDVKFESGDVEALSTSKLFSKANDPVVR SELGWRLFGPFTIIIALMLSVALSEVSPRQGRYYRLIPSIFIFASLIVLMIAIKTRISKG ELDIWAYPVALLVYAIAAALFSRKQKLGPKIKKQIKRVKL >gi|333032514|gb|GL891912.1| GENE 45 47111 - 48559 1668 482 aa, chain + ## HITS:1 COG:PA3831 KEGG:ns NR:ns ## COG: PA3831 COG0260 # Protein_GI_number: 15599026 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Pseudomonas aeruginosa # 116 477 128 493 495 429 59.0 1e-120 MKFTTYTTFPEQTSNESLWILVDSEQLQSNLNTYQINNLESILTATQFKANFNETLPLFG QLSTQPHSQLLGLGKAAELQAAKLAKLAQTIIKSAQNKFKHIAIDIAALPVEYHYLFALS LTQAAYGYDEFKSKKNEFVLQQVDLISSQTSLDENQLALVHAVQSGQSYARDLGNRPGNI CFPEYLAEQALALAAEFPDLLKVTVLNEQQMADLGMYAFLAVSKGSERPGRIVTLEYQAQ LEQAPVVLVGKGVTFDTGGISLKPGLGMDEMKFDMCGAASVLGTIRALCEARLPIHVVGA IAAAENMPSGKATRPGDIVTTMSGQTVEILNTDAEGRLVLCDTLTYIKRFNPAVVIDIAT LTGACVVALGKVLSGLFSPDDTLAAELQQAGEQSFDRVWRMPVIDDYQELLDSPFADIAN IGGPHGGAITAACFLERFTRDYRWAHLDVAGTAWLSGSAKGATGRPVPLLMQFLANRVST NG >gi|333032514|gb|GL891912.1| GENE 46 48552 - 48959 287 135 aa, chain + ## HITS:1 COG:PA3832 KEGG:ns NR:ns ## COG: PA3832 COG2927 # Protein_GI_number: 15599027 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, chi subunit # Organism: Pseudomonas aeruginosa # 1 127 1 131 142 69 30.0 2e-12 MAKVSFYLFETSEERQVDSACRLCRKILLKHSQIWWYCPDVQLQQTLDEKLWSFDPTSFI AHGVDQVDAAVCISAKQPSEQGWLVFNFNNHALEQVNHFSHIIEIVENNEAAKQIGREKF KMYRRLGIEPRTFKL >gi|333032514|gb|GL891912.1| GENE 47 49001 - 49636 831 211 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00250 NR:ns ## KEGG: ACICU_00250 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 211 1 211 211 305 100.0 1e-81 MALNVGQDFKKRWLNAPEAVRHAYQQDLARICDLLEPQTPIQLWVLNDEKAQLESQQNIE KAYADLKAELIEQARIRRQLALEKALADKRAKEAAYAAELQADEVRKFSEQTEALQALRS HLEQEVAEHTARYQKNPETPAIDYSSGAKLSITDDQILSELESVRVRLELEAESLIEQAV TVFRAKLHAAAQEEIEYILKNSNFSDEKIEK >gi|333032514|gb|GL891912.1| GENE 48 49767 - 49985 230 72 aa, chain + ## HITS:1 COG:no KEGG:ABSDF3311 NR:ns ## KEGG: ABSDF3311 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 72 1 72 72 122 97.0 7e-27 MDIPHQISTQIEQLNQGEQWTFSAQELYMSHNDFNSLSILLTRASEKGEFSITRTQHNKP WVGTHSVTLTKH >gi|333032514|gb|GL891912.1| GENE 49 50045 - 50704 1042 219 aa, chain - ## HITS:1 COG:PA4055 KEGG:ns NR:ns ## COG: PA4055 COG0307 # Protein_GI_number: 15599250 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Pseudomonas aeruginosa # 1 219 1 219 219 252 60.0 4e-67 MFTGIIESLGKVESLQSVGGDVRLRIQTDLDMSDVHLGDSIATNGICLTVIEWGDNWYAA DVSRESLNRTTLGNWKVGQRVNVEKAMLPTTRFGGHIVSGHVDGVGEITLVREDARSIYF EVTAPVELAKYLAEKGSVTVDGISLTINHLRGNILSLNLIPHTAERTNIGTWQVGSKVNL EVDVLARYIERLLLGDKAAEQKTESNISMAFLAENGFLK >gi|333032514|gb|GL891912.1| GENE 50 50747 - 52039 1337 430 aa, chain - ## HITS:1 COG:Cj0208 KEGG:ns NR:ns ## COG: Cj0208 COG3392 # Protein_GI_number: 15791595 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Campylobacter jejuni # 21 391 7 359 363 187 34.0 4e-47 MNSEPSVYHKRRHAARTTDEYLFHQLVPYLGNKRRLLHLILEALEITGTLNSKKKNPPIF ADFFAGSGVVSRLARQNGYRVIANDWEPYSHALNHAILACVDAPAFKELGGYQKAIDYLN RLPEVKGWVTHNLCPRNDDVYDPSRDRLFFKRRNGMRIDAIRQQIATWQAQGAINDVEMS ALLAPLLYSASFVSNTSGVFKSFHQGWGGRTQTALERIESLLWLTPSRFCEIGDRKRPAA EMWCVDAQHLANQMSGFEVDVAYLDPPYNQHAYSSNYHVLNALTLWDQVDLPPPDTKGYK SGIDRAWRKERPSPYNSSKHAKDAYEKLLSTINARYILTSYSTDGNIEPKDLLMANLERG KVTLLTQDVPRYRVSKQRQSERARVLEFIVITDTHAKPGPPLRQLLGQLYHFAELGGVDT SGNSTQLALW >gi|333032514|gb|GL891912.1| GENE 51 52036 - 53121 1163 361 aa, chain - ## HITS:1 COG:VC2271_1 KEGG:ns NR:ns ## COG: VC2271_1 COG0117 # Protein_GI_number: 15642269 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Vibrio cholerae # 7 148 8 149 149 203 66.0 5e-52 MSELKQDQYWMQQAIELAKRGLYSTKPNPNVGCVIVKDDQLIGEGFHPKAGQPHAEVFAL RQAGEQAQGATAYVTLEPCAHYGRTPPCAEALVKAQVKKVVVACPDPNPLVAGKGVQILK NAGIEVEIGICEDLAAQLNQGFLKAMSTGMPYVRLKVASSLDGRTAMASGESKWITGSAA RQDVQHWRAISGAVITGIETVIADDCQLNVRSLHNVDIETVAQPKRVILDRRGRLPLTAK ILENPETVMVMGPYRQELADLGVIQLEIQPLKTLLQTLSKQYQIYDVLIEAGATLSSAFL QEGLIDEMISYVAPTLLGQSARAMFNADFEYMAQQLRFKLLDVTQLDQDIRLRLIPTQEK V >gi|333032514|gb|GL891912.1| GENE 52 53137 - 53595 381 152 aa, chain - ## HITS:1 COG:VC2272 KEGG:ns NR:ns ## COG: VC2272 COG1327 # Protein_GI_number: 15642270 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Vibrio cholerae # 1 148 8 155 156 174 58.0 7e-44 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD HVAYVRFASVYQDFQDVEAFRRQIEQMQQREH >gi|333032514|gb|GL891912.1| GENE 53 53753 - 55150 1586 465 aa, chain - ## HITS:1 COG:RSc0343 KEGG:ns NR:ns ## COG: RSc0343 COG0004 # Protein_GI_number: 17545062 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Ralstonia solanacearum # 65 462 3 431 436 367 51.0 1e-101 MKKMLMALSLTGALLGGTAAWAEETVTTPTSEVTATSTSEAPATIAAAPAAEETPAAPTP TAKLDTGDTSWILISTALVLLMTIPGLALFYGGMVRKKNVLSTMMFSLSAAILVSLLWVI AGYSIAFSGTGAYFGDLSKAMLNGVAFDALSGTIPESLFVIFQMTFAIITVAILSGSIAD RMKYSAFMAFIAIWVLVVYAPITHWVWAADGWLFKAGALDFAGGTVVHINSGVAGLVAAY MLGKRIGLGRESMAPHNLTLTVIGASLLWVGWFGFNGGSALGAGARASMAILVTQVAAAA AAFSWLVVERMIRGKASVLGGASGAVAGLVVITPAAGFVGVGGALVMGLIGGVVCFWGIT ALKRLLKADDALDAFGLHAVGGIVGAILTGVFYSDEIIKAANVALAPTFAGQLWVQVEGV LATMVYSGIATFIILKVIDLIIGLRVNSDDERMGLDLSQHGERIE >gi|333032514|gb|GL891912.1| GENE 54 55208 - 55546 528 112 aa, chain - ## HITS:1 COG:PA5288 KEGG:ns NR:ns ## COG: PA5288 COG0347 # Protein_GI_number: 15600481 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Pseudomonas aeruginosa # 1 112 1 112 112 168 83.0 2e-42 MKLVTAIVKPFKLDDVREALSDIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGPDAV >gi|333032514|gb|GL891912.1| GENE 55 55826 - 56053 356 75 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003314 NR:ns ## KEGG: ABBFA_003314 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 75 1 75 75 77 100.0 2e-13 MLETLLQAILEQIDEPKKDLEKNLRALLNETVEKLDLVSKQEIERQKTALHLANQRLEAL QKQVSLLEEALKNKK >gi|333032514|gb|GL891912.1| GENE 56 56119 - 56976 708 285 aa, chain + ## HITS:1 COG:YPO3902 KEGG:ns NR:ns ## COG: YPO3902 COG0606 # Protein_GI_number: 16124034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Yersinia pestis # 1 280 1 283 507 277 51.0 2e-74 MSFSKIYTRGLLGLHAPLIEVEVHVSQGLPSLTIVGLAEAAVRESKDRVRSAIINSGFQF PTKRLTINLAPADLPKDGSRLDLPIALGILIASGQLPENCTEDFEFIGELALDGHVRPVS GALTLAMACQQAQHKIVLPVDNSQDISHLPNLECYPVNHLKEVCEHFLGTQKLAHAQPSD HSNEMPYKFDLADVKGQLRPRRALEIAAAGGHSLLFKGPPGTGKTLLASRLPSILPPLST QETLEVASIYSISNTPHTFGQRPFRAPHHTASAIALVGGGCQFHK >gi|333032514|gb|GL891912.1| GENE 57 57010 - 58797 857 595 aa, chain + ## HITS:1 COG:no KEGG:AB57_0548 NR:ns ## KEGG: AB57_0548 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 593 1 593 598 984 86.0 0 MPVNNDKITTIDCFPNDNISRVVYRYGGLVRNEDNDSTNPFVEVLLIEIRKSDQWLFLDK CSTFLVPVLDLDAVQHGSIWDGNVLTNYTYRFSGKLITKRFSFDFSNNKPRNIKLSDKIP DTSEYYIPLKNYFLPNKVDYVLQGYPFTKYTNDSYRKVNHCLMHSNDGTQVITSSIHILH SLFVNRKDIRGLLLSTSGQSIINRFLESYTTEVENDNIEYKIKIRKPYEDIGETAIIFLA NLALNPYVQTIVDKIQRSMEVTEFHHLQHGTGIRYPIVYPPHPTKLFLEAEGIWLDDNKT RFFITRVKKFDPINDHMIDVNKDLTNTVSKTDEKNPRPREKSQNKNEHINTQKPPSRTSG EYRKRSDVETGNTQNILKYSFNEPANDPIEVGTSNHPYSDKSEDVETSSDEPYGNKNTKT KKSETTDNPPSRDERFDIQYIIQSLNHLTLDTTSPLERVYSIDILGNEIHGFNLLQIKKL VPQPKHPSWIDAEFGRKLLFLKLELKDQHDQYYLIDIHKNKSHEAFCAFIIVSPHKLTRE QIKNICIELENAKGIKKWTLRCESFTKKIISIKHSSATPDEWKNRFKNLFSTLIN >gi|333032514|gb|GL891912.1| GENE 58 59138 - 59983 461 281 aa, chain + ## HITS:1 COG:SMc02722 KEGG:ns NR:ns ## COG: SMc02722 COG3231 # Protein_GI_number: 15966137 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Sinorhizobium meliloti # 28 226 20 217 303 225 57.0 7e-59 MYLSDLNAQQREPPLNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASRRG ELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAWPSMG QQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLLARVERE LPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLALMIANAEE NWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG >gi|333032514|gb|GL891912.1| GENE 59 59989 - 60819 204 276 aa, chain + ## HITS:1 COG:mll8451 KEGG:ns NR:ns ## COG: mll8451 COG3570 # Protein_GI_number: 13476976 # Func_class: V Defense mechanisms # Function: Streptomycin 6-kinase # Organism: Mesorhizobium loti # 3 272 4 276 279 308 56.0 5e-84 MPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLKPIEDIADELRGADYLVWR NGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATEIAAELMAKLYAASEEPLPSA LLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMMSNASELRGLHGDLHHENIMFSS RGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDPRRIAQMADAFSRALDVDPRRLLDQ AYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQTSY >gi|333032514|gb|GL891912.1| GENE 60 60939 - 61163 197 74 aa, chain + ## HITS:1 COG:no KEGG:S2706 NR:ns ## KEGG: S2706 # Name: not_defined # Def: hypothetical protein # Organism: S.flexneri_2457T # Pathway: not_defined # 1 74 1 74 74 127 100.0 1e-28 MKKPNQDDEPFFITEEIAAEMIAGGYEFELPPIPCTIRLRDVLERMTDAELALQPGEIAD QERERCRRKPCSTS >gi|333032514|gb|GL891912.1| GENE 61 61944 - 62375 145 143 aa, chain + ## HITS:1 COG:no KEGG:S2705 NR:ns ## KEGG: S2705 # Name: not_defined # Def: putative transposase # Organism: S.flexneri_2457T # Pathway: not_defined # 1 143 191 333 497 286 99.0 1e-76 MLFLDGVYVEQSHGSARFRWVKAPTSPELTQLTHTIAHRVGRYLERQGLLERDVENSYLA SDAVDDDPMTPLLGHSITYRIAVGSQAGRKVFTLQTLPTSGDPFGDGIGKVAGSSLHAGV AARADERKKLERLCRYISRPAAS >gi|333032514|gb|GL891912.1| GENE 62 62514 - 62975 -329 153 aa, chain + ## HITS:1 COG:no KEGG:S2705 NR:ns ## KEGG: S2705 # Name: not_defined # Def: putative transposase # Organism: S.flexneri_2457T # Pathway: not_defined # 1 153 345 497 497 309 99.0 3e-83 MRYQLKTPYRDGTTHVIFEPLDFIARLAALVPKPRVNLTRFHGVFAPNSRHRALVTPAKR GRGNKVRVADEPATPAQRRASMTWAQRLKRVFNIDIETCSGCGGAMKVIACIEDPIVIKQ ILDHLKHKAETSGTRALPESRAPPAELLLGLFD >gi|333032514|gb|GL891912.1| GENE 63 63213 - 63617 270 134 aa, chain + ## HITS:1 COG:SMc00080 KEGG:ns NR:ns ## COG: SMc00080 COG0640 # Protein_GI_number: 15964678 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 19 128 107 221 227 94 44.0 6e-20 MGISLNHGVHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQ YFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTI TEKGYAAFKTHFHI >gi|333032514|gb|GL891912.1| GENE 64 63595 - 64218 431 207 aa, chain - ## HITS:1 COG:AGl1301 KEGG:ns NR:ns ## COG: AGl1301 COG1309 # Protein_GI_number: 15890777 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 202 49 256 261 153 39.0 2e-37 MSRLDKSKVINSALELLNEVGIEGLTTRKLAQKLGVEQPTLYWHVKNKRALLDALAIEML DRHHTHFCPLEGESWQDFLRNNAKSFRCALLSHRDGAKVHLGTRPTEKQYETLENQLAFL CQQGFSLENALYALSAVGHFTLGCVLEDQEHQVAKEERETPTTDSMPPLLRQAIELFDHQ GAEPAFLFGLELIICGLEKQLKCESGS >gi|333032514|gb|GL891912.1| GENE 65 64300 - 65517 701 405 aa, chain + ## HITS:1 COG:AGl1300 KEGG:ns NR:ns ## COG: AGl1300 COG0477 # Protein_GI_number: 15890776 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 369 1 369 394 237 40.0 3e-62 MNSSTKIALVITLLDAMGIGLIMPVLPTLLREFIASEDIANHFGVLLALYALMQVIFAPW LGKMSDRFGRRPVLLLSLIGASLDYLLLAFSSALWMLYLGRLLSGITGATGAVAASVIAD TTSASQRVKWFGWLGASFGLGLIAGPIIGGFAGEISPHSPFFIAALLNIVTFLVVMFWFR ETKNTRDNTDTEVGVETQSNSVYITLFKTMPILLIIYFSAQLIGQIPATVWVLFTENRFG WNSMMVGFSLAGLGLLHSVFQAFVAGRIATKWGEKTAVLLGFIADSSAFAFLAFISEGWL VFPVLILLAGGGIALPALQGVMSIQTKSHQQGALQGLLVSLTNATGVIGPLLFAVIYNHS LPIWDGWIWIIGLAFYCIIILLSMTFMLTPQAQGSKQETSCQFHK >gi|333032514|gb|GL891912.1| GENE 66 65812 - 66228 213 138 aa, chain + ## HITS:1 COG:no KEGG:AB57_0548 NR:ns ## KEGG: AB57_0548 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 135 163 297 598 272 100.0 3e-72 MHSNDGTQVITSSIHVLHSLFVNRKDIRGLLLGTSSQSIINRFLESYTTEIVDDNVEYKI KIRKPYEDIGETAIIFLANLALNPYVQTIVDKIQRSMEITEFNHLQQGTGKRYPIVFPPH PTKLFLEAEGIWLDDLAS >gi|333032514|gb|GL891912.1| GENE 67 66404 - 67252 495 282 aa, chain + ## HITS:1 COG:no KEGG:AB57_0548 NR:ns ## KEGG: AB57_0548 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 282 317 598 598 520 100.0 1e-146 MIDVNKDLTNTISKPDEKNPRPREKSQNKNEHINTQKPPSRTSGEYRKRSEVETGNTQGI LKYSFNEPTDDPIEVGASNQPYSDKSEEVETSSDEPYGNQNTKIKKSETTDTPPSRDERF DIQYIIQSLQELASEMGSPLEHLSAINEHGEMIASINLLQIKKLVPEPKHPSWIDYDKGR KLLFLKLDLKDQNGFSYLIDIHKNKNHEAFCAFLIFTQNKLTSEQIKKICIELENAKGIK KWALYCDSFIHKMIAIKHLYATPDEWKNRFKNLFISLQKDKS >gi|333032514|gb|GL891912.1| GENE 68 67547 - 69034 1546 495 aa, chain + ## HITS:1 COG:PA2563 KEGG:ns NR:ns ## COG: PA2563 COG0659 # Protein_GI_number: 15597759 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfate permease and related transporters (MFS superfamily) # Organism: Pseudomonas aeruginosa # 1 495 1 495 495 677 71.0 0 MLSTIREQWFSNIRGDVLAGIVVALALIPEAIAFSIIAGVDPKVGLYASFCIAVVIAFVG GRPGMISAATGAMALLMVTLVKEHGLQYLLAATILTGFIQILAGYLKLGALMRFVSKSVV IGFVNALAILIFMAQLPELTNVTWHVYAMTIGGLAVIYLFPYIPVIGKLLPSPLICIVLL TLFALFIGLDVRTVGDMGQLPDTLPIFLLPDIPLNLETLAIILPYSLGLAAVGLLESMMT ATIVDDLTDTTSDKNRECKGQGVANVASGFLGGMAGCAMIGQSIINVKSGGRTRLSSFSA GVFLLIMVVFISDWLKAIPMAALVAVMIMVSIGTFNWDSLRNIRQYPLSSNIVMIVTVVV VVATHNLAYGVLVGVLLSALFFANKIERYMAIQSVFDESESTRTYTVTGQVFFSSADKFT SAFDFKEALSKVVIDVSQAHFWDVSAVAAVDKVVIKFRREGTEVELIGMNEASKTLVDKF GIHDKPDALDRLNSH >gi|333032514|gb|GL891912.1| GENE 69 69047 - 69898 522 283 aa, chain + ## HITS:1 COG:slr1230 KEGG:ns NR:ns ## COG: slr1230 COG0589 # Protein_GI_number: 16330107 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Synechocystis # 1 283 1 287 287 187 36.0 3e-47 MSKIIACIDGSLVTNTVCDYAAWFSDKLNSPIKLLHVIDKPKAKAPQDLSGAIGLGSRET LLKELVELEERKGKIELEHGQILLREAKNYLLEKFSIDAQSFQRHGSVLETIMGMEDDIR VLVMGKHGNETEHDSSKIGTHIENVVRALHKPVLITSAPFSPPKSFLIAFDGSQTARKCV ERIASSPLLKGLAVHLVYVGNPNSEMQNQLSWAKEQLESQGFNITSNTLDGEVDKAIINY AEQHQIDLIVVGAYGHSKIRQFFIGSTTTKVITSANKPVLLLR >gi|333032514|gb|GL891912.1| GENE 70 69966 - 70265 203 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|301348312|ref|ZP_07229053.1| ## NR: gi|301348312|ref|ZP_07229053.1| hypothetical protein AbauAB0_18743 [Acinetobacter baumannii AB056] hypothetical protein AbauAB059_17868 [Acinetobacter baumannii AB059] conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 99 1 99 99 179 100.0 5e-44 MNTMLISPTLNVSCSENVLLKISSYFGVSHEQAYRKGVDSLLKLTEMVIANNEHSEIIKL FLCDCHLRTSINLDDISDMPTQLIGDCLNVIVLRYAFVV >gi|333032514|gb|GL891912.1| GENE 71 70338 - 70709 388 123 aa, chain + ## HITS:1 COG:no KEGG:AB57_0559 NR:ns ## KEGG: AB57_0559 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 123 1 123 123 235 100.0 5e-61 MGQAKQRGTLEQRVKQAQEQKDDFYGTERSVAEVLAELGLPKESTVKGYVIHLPEKDEFV AAINDNNISFSVAYARTPELAMIYDEPQKAISDAKKISKHKLLVCVLFETSNQYMINDIW ANY >gi|333032514|gb|GL891912.1| GENE 72 70833 - 70937 113 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLKLYCVNTAFKASLGDFLGGGDNLINTWKSTL >gi|333032514|gb|GL891912.1| GENE 73 71084 - 71998 357 304 aa, chain - ## HITS:1 COG:no KEGG:AB57_0561 NR:ns ## KEGG: AB57_0561 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 304 173 476 476 616 99.0 1e-175 MIAAGCADLCDDCYWHQNLWNKFDQNQKVFESSDLKQQYENYIGWLEKKVGSHKAALYIN KHTHFFIKTEIDWNQSVPTPKQLLVRLRSSGLRKFELVMQWLEEVHDIRIDMDNKKSCSE RDQMEKLVQRILQPSLAYDVVLEYKNKLEEKIKRGETSIRSARLAVKPAVALMLSMEGES AQLPNLEHVKAYLAEYSGQAAALTGFINFLNENYGASIDYLKLKKSDFLKTKQKKKLEME LIALTQTDLNDSELILSWVRNGLRYFHQLPYIDALKIKTEMITEIEDGFTVVLNGQYYWL PKTQ >gi|333032514|gb|GL891912.1| GENE 74 72507 - 73622 513 371 aa, chain - ## HITS:1 COG:no KEGG:AB57_0562 NR:ns ## KEGG: AB57_0562 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 371 1 371 371 754 100.0 0 MSQPEQCWYIRTPIQQGEIFSSWLIRSALDVGCSPMVLIEALWGKWRALTIDLDKGVDAE RFDALLSHSMESKQKIQQSMLSSVVSQIQPNYDSNQNIPWVLSLGTRNRSNTSGRQVCVE CLKSHENPPYLRLMWRIGWHCSCVEHQLSLIDHCPECGVTIQPFKADMEHGCLAICTTCG FDLRRCEESKNINLNALNFQNKAEQVLKQKIGFYNQSPVTTQVWFEIARSWLSEIRFLVN TPNKNVIQLFESFDVNLHLSHPVTPLAFEYLSTQERIVLLSMLDQIMDIPCDLLVQRSKE YGVSRANFWDKRKKLPVQLQQMKDLMIKPTRRYPVSRAAITVTKPKSKATVQRQWLNLLR RSNNSGAMHID >gi|333032514|gb|GL891912.1| GENE 75 73652 - 74572 546 306 aa, chain - ## HITS:1 COG:all3629 KEGG:ns NR:ns ## COG: all3629 COG2842 # Protein_GI_number: 17231121 # Func_class: R General function prediction only # Function: Uncharacterized ATPase, putative transposase # Organism: Nostoc sp. PCC 7120 # 41 287 39 276 276 67 24.0 3e-11 MEKYEHLAEHVLEIMQLSDSERIETLFTDRWIGYKKAITIMNTLTDILNRPRKLRPECLL IVGDSNMGKTTIIHEFARQYYTKTVSDADMDLLSVTKPVLPILAPAKANVKELYINILNH FFVPFRASDPEAKLRNQAVHLMRKYETKMLIIDEIHNCLTGSAKLLPEVMNTLKNLSNEL SLNIVGVGTREAITILHTDPQYASRFDVVNLPKWELNQDFLRLLVSYVRLLPLKKQSNLA SKEIATLIFEVSGGNLGDLNRLLVECAKEAILQGDEEITYDIVHKFKWLKPTEGLRNIRN INLSLS >gi|333032514|gb|GL891912.1| GENE 76 74577 - 76487 1256 636 aa, chain - ## HITS:1 COG:mlr6273 KEGG:ns NR:ns ## COG: mlr6273 COG2801 # Protein_GI_number: 13475245 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mesorhizobium loti # 83 588 15 505 535 271 31.0 4e-72 MIESNAVNIDRSRIILKPNVVVGYEGQPYKIVNVLNANDIVISSLDSVRSLQVNARSLTI FNGGNTLTERLNKGDQDISNEAWQIALQRYEIIKPLIEYSTTELVENRANEYDVNRSTLW KWLKDYRENNSLMALIPKKRGWTTEKSRLSPQVSNIIKQAINDEYLNAKKPSISKTIEIV KAECSRLQLEAPHENSIRRRIEALNDYQVTKARLGSKAAIDKFKAAAGSFPNADYPLAYV QIDHTPLDIEIVDDEFREAIGKPHLTLAIDVFSRMIVGYYLSLEAPSTTSVAMCIASCIL SKKRKLIELDIDAEWQVEGIMDSVHTDNGPDFRTNHISKACLKYGIHWEYRPIGGARFGG HIERMLGIVNLEMHVLDGTTFSNVQQRGTYDSAKQACMTLKELEYYIVYWITKVYHQKKH SALGTSPIVKWEEGVWGTKTTAGTGLKERVSDEDTLFIDFLPEFEATIQRTGVQKDNLFY FADCLRQWVNSIDPEDNNRKRKRKFLFKRDPRDISQIWFYEPYSNTYFKVPTAKREIPPI SLFEYKQVQNYLKSERQDVQNQDEIYKAILHLRDQLNQARSLTRKQRRSNQRKKENAKAI TQLSEQNQSKKAVVSESLQTSDDLWSTPLTAFDDLR >gi|333032514|gb|GL891912.1| GENE 77 76488 - 77198 450 236 aa, chain - ## HITS:1 COG:no KEGG:AB57_0565 NR:ns ## KEGG: AB57_0565 # Name: not_defined # Def: transposase protein A # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 236 1 236 236 481 99.0 1e-135 MKKLSDEYLPVRKAQTVYGSISGNYAFRGEKTIWFESTLERDFILKQEFNNNVIDVIGQP VVIPYITELGNQSTYTPDFLVQFSSSNCDDFEDFPVPMLIEIKPKKKLVEDWDKLKPKFR AAHRFAADKGWKFKIISETRLYDQYWENINFLKKFRRSHVGAVDQQLLLDTLQELGQSTI NQLPAHIFKDKTNVLKGIHQVWALVAKRMIACDLYCPLTAETVIWVNQNDAFARNI >gi|333032514|gb|GL891912.1| GENE 78 77323 - 78006 757 227 aa, chain + ## HITS:1 COG:NMA2080 KEGG:ns NR:ns ## COG: NMA2080 COG0606 # Protein_GI_number: 15794956 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Neisseria meningitidis Z2491 # 7 223 279 495 498 235 55.0 6e-62 MPLYSIAVNDSGSHPKPGEITLSHLGVLFLDELPEFDRKVLEVLRQPLESKEIIISRAAR QITYPANFQLIAAMNPCPCGYAFNQDSRCQCSPESIKRYQNRISGPLLDRIDLHIDVPPL KAQELQDPTPAEDSTTVRQRVIYAYEQQMQRQDCLNQALSPKQLEQHAVLDSTSQRMIEM AQQRLNLSARAYHRVLRVARTIADLAQSEVIQSPHLTEALSYRGNHS >gi|333032514|gb|GL891912.1| GENE 79 78021 - 79454 932 477 aa, chain - ## HITS:1 COG:alr4738 KEGG:ns NR:ns ## COG: alr4738 COG1167 # Protein_GI_number: 17232230 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Nostoc sp. PCC 7120 # 27 471 23 486 490 216 30.0 7e-56 MLRPWQIHFRIDEREEKTVFLKLTNLISQEILSGRLVQGTMLPGSRILSKELGINRKTVQ AVYEELEAQGWLVTRPRKGTFVADVLPEKKPQIEPRADRKVSDKPIIQQVAQRPHNDGVP DPRLIPYELFSRAYRHALIKITQNQYMGYGDPRGMAELRQALKQMLSMERFMNVAEDEIC VVRGSQMGIFLASRALPNRQGVIVVEELYYPSAFKAFQSNGFQVVSVKLDEQGIVIEDLE RILKEHSVAAIYTTPHHQYPTTVTMTMSRRLQLLELSKKWGFYIIEDDYDHEFHYDSRPM PPLASLPHSELVIHVGSLSKVFAPGIRLGYIVAAPTIIQTITEDILLIDRQGNNITELAL ADLMQRGEIKRHIRKMKKIYQLRRDHALAEFQRVFAESIQIQPPAGGMALWVKFQKSFTQ NQLIKLKELNIDTEQKFKQKEYPNCSIRFGFAALSEKEITSLIETLNEALNKRTADL >gi|333032514|gb|GL891912.1| GENE 80 79599 - 80342 671 247 aa, chain + ## HITS:1 COG:PA0224 KEGG:ns NR:ns ## COG: PA0224 COG0235 # Protein_GI_number: 15595421 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Pseudomonas aeruginosa # 1 247 13 259 260 339 62.0 3e-93 MQHAQQDMQKWISDLDLTDRQKLALTCRILFDHGHDAGLAGQITCRSENKETFITQRFGL GFDEITASNLLEVNQDLEPINQEGMANPANRFHTWIYKEHPEVNCIIHTHPTYVAALSML QIPLMISQMDVCALYEDCSFVGHWPGVPVGNEEGILISSALGKNRAVLLSHHGQLVTGKT IEEACNLALLIERAAQLQLLAMSAGQIQPIPHALAAEAHDWVSTDKRNKVNFAYYARKAL KKHSDCI >gi|333032514|gb|GL891912.1| GENE 81 80358 - 81236 811 292 aa, chain + ## HITS:1 COG:PA0223 KEGG:ns NR:ns ## COG: PA0223 COG0329 # Protein_GI_number: 15595420 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Pseudomonas aeruginosa # 3 290 5 292 293 325 52.0 5e-89 MKLNGIIGYPVTPFSDDNNINLPVLKQMLDLLIENGCDAIAPLGSTGESAYLEWDEWCLV AKTSIESINKRVPVIIGISELTTNQAIKKAQIAQSYGADALMVIPVSYWKLTDQEIFEYY QAIAQATTLPIMIYNNPATSGVDMSPELIVRMFNNIANIMMVKESSGDIQRMHKIYELSK GELPFYNGCNPLALEALCAGASGWCTAAPNLLGQRPQQLIEYVKNGELEQAQKSFYQQLP LLRFIVKGGLPKTIKAGLQLKGVAAGTPRKPLTKATDIELNQLKQLLSEIEN >gi|333032514|gb|GL891912.1| GENE 82 81279 - 82088 1015 269 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003319 NR:ns ## KEGG: ABBFA_003319 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 269 2 270 270 467 100.0 1e-130 MKFALKAVTFGVLTAGSTMVMAEDAPSFYGITATGSVAATTDYRFRGITQSSNNPAIQGG FTFSHKSGAYVALWGSSVDFNTPGVSTETDISLGYTNTLKLSDTLAPTYDVGVIRYGYIG SDSKFTNPYNGDTGFDFTEFYGKLTFADSLFKGDALSVGVNYSNDYWGHSDEFWYFNVGY SAPIADTGFTGLASVGYNKLKNKDSLLVVAGGPGEDDSYIDYKVGVNYNILGIVAELDVV GTDISTSGMTDAQKKPYDTGLVFSLTKTF >gi|333032514|gb|GL891912.1| GENE 83 82148 - 82318 110 56 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003320 NR:ns ## KEGG: ABBFA_003320 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 56 1 56 56 79 96.0 4e-14 MFSLYFTQTKCSYFIVIYKDNYLEDFYFSRYISFLVSKLMKCSDTKYELGTAIAKA >gi|333032514|gb|GL891912.1| GENE 84 83016 - 84332 1443 438 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003321 NR:ns ## KEGG: ABBFA_003321 # Name: not_defined # Def: porin D precursor # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 438 1 438 438 799 99.0 0 MLKAQKLTLAVLISAAIISSAQASEQSEAKGFVEDANGSILFRTGYISRDKKQGAKDTSS VAQSAIVSIESGFTPGIVGFGVGVVGDGSFKIGENKNAGNQMIPKHNDGSAYDHWARGGG SVKARFSNTTVRYGTQVLDLPVLASNTGRMVPEYFTGTLLTSHEIKNLEVVAGKFTKDQM SDQINTDADASGRGLDRAIVWGAKYKFNDNLNASYYGLDSKNALERHYANVNFKQPLAND SSLTYDFSGYHTKFDANAHTYSATGTVAPNYAADGIAGEEKTNNIWAISGTYATGPHSVM LAYQQNTGNVGYDYGQNADGFQSIYLPNSYMSDFIGNHEKSAQIQYNVDFGKLGVLPGLN WTTAFVYGWDIKVRNVTDDAQEREFFNQVKYTVQSGFAKDASLRIRNSYYRASDAYQGAY IGDTNEWRIFLDIPVKLF >gi|333032514|gb|GL891912.1| GENE 85 84439 - 84966 616 175 aa, chain - ## HITS:1 COG:PA4031 KEGG:ns NR:ns ## COG: PA4031 COG0221 # Protein_GI_number: 15599226 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Pseudomonas aeruginosa # 1 175 1 175 175 260 74.0 1e-69 MSYSNIPAGKDAPNDIYVIIEIPANAAPIKYEIDKDSDALFVDRFMGTAMFYPANYGYVP NTLSEDGDPLDVLVVTPHPVAAGSVIRCRPVGKLNMEDDGGIDAKLIAVPHEKLSPLYKD VQEYTDLPPLLISQVEHFFSHYKDLEPGKWVKISGWEGADVAKAEVLKAIEAAKK >gi|333032514|gb|GL891912.1| GENE 86 85094 - 85504 293 136 aa, chain - ## HITS:1 COG:RSc0788 KEGG:ns NR:ns ## COG: RSc0788 COG3686 # Protein_GI_number: 17545507 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 12 130 5 121 127 91 42.0 4e-19 MDGTMHGISSIIYIILVACLLPYAFTVIAKFTGGFQPVDNQNPRDFLANTKGIAARANAV QQNSFESLPLFLTAILMAEYMVVPEYFILRLGWAYIILRVIYGICYLSNWATLRSIVWFL SLLCPIFLLIVTIKLT >gi|333032514|gb|GL891912.1| GENE 87 85599 - 85982 329 127 aa, chain + ## HITS:1 COG:no KEGG:AB57_0234 NR:ns ## KEGG: AB57_0234 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 127 1 127 127 238 100.0 5e-62 MQQPDQKELFEVLEKQKKNQLQVDRIFKIVLPIVAFLLSVICANFNWQSTLGTFVILTVT FIAVGVKRLPLWHWLIVITIYCLVDNYLSYGQLDVTHLRLQLGTMLVFVGMVGIGRPYVD RWFMKNH >gi|333032514|gb|GL891912.1| GENE 88 86021 - 87700 1956 559 aa, chain - ## HITS:1 COG:mll5415 KEGG:ns NR:ns ## COG: mll5415 COG0318 # Protein_GI_number: 13474515 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mesorhizobium loti # 2 556 14 566 567 692 60.0 0 MEKIWFAEYQKTGIPETVALPAENTSLVDIFERNFQKFGSRDAFIFMDKAMSFNELELAS RKFATYLQNLGLAKGTRVAVMMPNVLQYPVVALAVLRAGLVLVNVNPLYTARELEHQLND SGAEVLVIIENFASVYQSILGKTPVKHVVVASVGDMLGTLKGTLVNFVLRKVRKQIPAWN IPGHVKFNSALNKENPSNYKRPTLTLSDTAVLQYTGGTTGVSKGAELTHRNLVANLLQCD GIFQSKFGANDGAKGDRIVCALPLYHIFAFMVCAMYGMYKGQANILIPNPRDLPAVIKEL RKYQPSFFPAVNTLFNALVNNEEFKQLDHSNLKMAMGGGMAVLPSTAEAWKKITGTTIIE GYGLSETSPVATANPPASTEFSGTIGIPLPLTEVAILDDDGKEVPLGEQGEISIRGPQVM KGYWNRPDETAKVMTADGFFRTGDIGVMDSRGYVKIVDRKKDMILVSGFNVYPSEIEEVI AKHPKVLEVAAIGVPDEKSGEVPKLFIVKKDPSLTTEEVLNFAKENLTGYKRPRYVEFMD ELPKSNVGKILRKDLRKPA >gi|333032514|gb|GL891912.1| GENE 89 87998 - 90217 2273 739 aa, chain - ## HITS:1 COG:PA4964 KEGG:ns NR:ns ## COG: PA4964 COG0188 # Protein_GI_number: 15600157 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Pseudomonas aeruginosa # 4 737 7 748 754 886 59.0 0 MTSLAHHATENRSVAEFTEQAYLNYAMYVIMDRALPHISDGLKPVQRRIVYAMSELGLKS SGKPKKSARTVGDVLGKYHPHGDLACYEAMVLMAQPFSYRYPLIEGQGNWGSPDDPKSFA AMRYTEAKLSAYSELLLSELGQGTSEWQDNFDGSLKEPITLPARVPNILLNGTTGIAVGM ATDIPPHNLREVVKGTIALIRNPQTSDEKLAEYIPAPDLPTKAEIITPPEELLKIQTTGR GSYRMRAVYTIEKNEIVITELPYQVSGSKVITQIADQMQAKKLPLVVDVRDESDHENPTR LVIVLRSNRIDAEAVMSHLFATTDLESSYRVNLNMIGEDGRPQVKSIRRILLEWIEIRKK TVTRRLQYHLNRIEKRLHILAGLLIAYLDIDTVIRIIREEDQPKPVLMEHFNIDEIQAEA ILELKLRHLAKLEEMEIRHEQDELSAKAAIIREQLENPESLKNLIIGELKEDAKKFGDER RSPIVARAEAVQIKEQDLMPAETVTVVLSEAGWVRAAKGADVDAENLNYRAGDQYLSHAV GKTNQRVYFLDETGRSYALPISNLPSARGLGDPLSSKLSPASGVSFIQVYLDDDESELIA ASSAGYGFKTQTKQLDTNAKAGKTFLTVPDKAKALPLISAQNMTHLAVLSSAGRLLILDL AELPNLNKGKGNKLIQLEGKEQILSMTTLNLDEIIQVVAGQQHLKLKGDDLQKYMGKRAS KGQLLPRGYQKANKLLIQR >gi|333032514|gb|GL891912.1| GENE 90 90371 - 91690 1266 439 aa, chain - ## HITS:1 COG:BS_yceI KEGG:ns NR:ns ## COG: BS_yceI COG0477 # Protein_GI_number: 16077364 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 19 435 12 400 400 343 47.0 5e-94 MDLVSRIQNLPIGKFHYTLLWVVGLGWMFDAMDTGIIAFIMTTLVKDWSLTPAESGWIVS IGFVGMAIGAVCSGALADRFGRKTVFAMTMAIYSIATALCAFAPDLKWLLIFRFIVGLGL GGQLPVAVTLVSEYVPAHVRGRFIVLLESFWGLGWLVAALISYFIIPKFGWHIAFLIGGL PLIYILVIWKKVPESIPYLINRGRIEEAHALVQKLETEACVQIVHHIEVVPVAMRQKVSF KQLWSGQFARRSLMLWLIWFGIVYSYYGIFTWLPSLLVKQGYDIVKSFEYVLLMILAQLP GYLAAAWFVERLGRKITLAAFIGFCALSAYFFGQADSVNSIMFWGCLMSFFNLGAWGVLY TYTPEQYPANIRAFGSGWASAMGRIGGIVAPMVVTHMMVAKNGFNHVFMMFTVVLLAVAL VILILGEETQGKRLESIGL >gi|333032514|gb|GL891912.1| GENE 91 91773 - 92417 733 214 aa, chain - ## HITS:1 COG:PA1037 KEGG:ns NR:ns ## COG: PA1037 COG2860 # Protein_GI_number: 15596234 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 203 1 203 206 274 70.0 1e-73 MLLTVIYIIAITAEAMTGALSAGRRSMDWFGVVLIACVTALGGGSVRDVLLGHYPLTWVK HPEYLVLTCCAAFVTIVIAKWMRHLHNIFLVLDALGLIGFTIIGCQIALQMGHGFVVSAV AGVLTGVSGGILRDILCNDVPFVFRRELYASISFVAVICYWVCLDLGLSLELTVISTLVF GFTLRLIAIYFGLEMPKFIYKDDDAESASSTDEH >gi|333032514|gb|GL891912.1| GENE 92 92463 - 92930 364 155 aa, chain - ## HITS:1 COG:HI0277 KEGG:ns NR:ns ## COG: HI0277 COG3012 # Protein_GI_number: 16272235 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Haemophilus influenzae # 1 155 8 161 161 144 50.0 8e-35 MTQQTCPCGKGSYAECCEPLHLGTAKALTAEQLMRSRYSAFALQEIDYIVQTTALGQQTA LDKEAIAEWSKQNQWLGLEVVNANEKLDKTHAQVEFKAHYHDGKSAQIHHEVSHFVFHQQ QWFFLDPTVDMQVTMKQPCICGSGKKFKQCCAQFL >gi|333032514|gb|GL891912.1| GENE 93 93002 - 94594 1955 530 aa, chain - ## HITS:1 COG:BMEI0671_1 KEGG:ns NR:ns ## COG: BMEI0671_1 COG0861 # Protein_GI_number: 17986954 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Brucella melitensis # 4 239 6 241 241 344 74.0 2e-94 MIFEWMSDPSAWVGLATLIVLEIVLGIDNLVFIAILAEKLPPEQRTKARIVGLILALGMR LILLASIAWVVTLTQPLFHIFSHPFSGRDLILLFGGVFLLFKGTMELHERMEGKQLHKED NPVHAAFWMVIVQIVVLDAVFSLDSVITAVGMVKELSVMMVAVVIAVGIMLWASRPLMDF VNKHPTVVILCLGFLMMIGFSLVVEGFGFHIPKGYLYAAIGFSILVEMINQTMRRNQEKL VTTTDLRYRTASAVLRMLGSKNSGSTADAQTADKEDVLATQAFADEVFDEENGAYHSVLV QGVLGLSERPVKSVMTPRPELEWIDLDEEPEVLKERLMSMTHSRLIVARGELDNIEGIAL THKVLNGFIETGVIDFQKHLREPVIVHENAQVLMVMEQLRQAPLQMAIVLNEYGSIEGIA TPIDILEAIAGEFPDEDELDAAAESLEDGSLILEGSTDIRHVSLLLGRDLVDESEQYSTL SGYLLFHLGRLPENGETVEADGYRFEVVTMEGHKIEKVHIVSIEQDESKD >gi|333032514|gb|GL891912.1| GENE 94 94921 - 95544 643 207 aa, chain + ## HITS:1 COG:PA4923 KEGG:ns NR:ns ## COG: PA4923 COG1611 # Protein_GI_number: 15600116 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Pseudomonas aeruginosa # 24 183 6 165 195 181 53.0 1e-45 MNSVLTMAVNDSPITSVKTTQPLIALYCGSRAGNNPIYREKAIELASGIAEQGFGLVYGG ASIGLMGQVAESVLAHGGEAVGVIPEFMLDYEVAHAGLTELHVVETMHERKAMMAERASA FIALPGGLGTFEEILEIATWGQLNQHQKPMILYNVNGFYNALIAQLDHAVQEGFLPLQHR AKLIVCEEIDQIYNVIKNLKMPKRFVV >gi|333032514|gb|GL891912.1| GENE 95 95742 - 97133 1140 463 aa, chain + ## HITS:1 COG:PA0458 KEGG:ns NR:ns ## COG: PA0458 COG0477 # Protein_GI_number: 15595655 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 15 457 13 457 477 379 48.0 1e-104 MNATPTHQALQPEYRLLVLLVSIGFFMQALDTTIVNTAIPAMAHHLNEDPLRMHSVVVAY VLSVAACIPLSGWLADRFGVRNTFLSAIIIFTLASLGCGLSQSLNQLLFFRVIQGIGGAL LLPVGRLSLLKIIPRTQFLAAMSLMSLAGLLGPLAGPTLGGWLVEVATWHWIFLINIPMG VLGILMTLKVMPNVKEPTVKTFDLIGFVLLVVAMIGWSLGIEHLASPEYSKWFSISLLVV GVVATLWYAYHSHTHQNALFRSRLFRNKIYAIGILGNFFARFGGNALPFVLPLMLQVAFG FEPFIAGLMMIPLVLGSLFSKPIVRPIIQKMGYRRFLLINTTLVGLCIASFAIMTVDTPT WFRALHFFLFGTLNSLQFVGMNTLTLKDLPQQDASSGNSFLSMIMMLSMSIGVALAGTLI NLFTDYYGTAHVTTAFHVTLICLGCINIITALIFWQIPKNTPV >gi|333032514|gb|GL891912.1| GENE 96 97211 - 97969 705 252 aa, chain + ## HITS:1 COG:AGc393 KEGG:ns NR:ns ## COG: AGc393 COG3757 # Protein_GI_number: 15887583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 246 112 317 319 186 42.0 4e-47 MTKLAKTFSAPRYNTLIGIVLACVMGVLTYFGLFYQQKAIAQDYPVQGFDVSHHQENINW KKISPKKFQFVYLKATEGGDYKDPKFQENWLKAREHGFHVGAYHFYRLCRDGKTQAENFI STVPNKADALPPVIDLEYDSNCINSHTKEQLLKEIGIMHDSLKHHYGKQPIFYISKTFYH IVLIGSFPHTPLWVRDYEGKPELKDKRKWLFWQHSNQGKIEGITKPVDLNVYEGSVKEWH QFLQQQGIVKAQ >gi|333032514|gb|GL891912.1| GENE 97 97971 - 99026 798 351 aa, chain + ## HITS:1 COG:NMA1661 KEGG:ns NR:ns ## COG: NMA1661 COG0389 # Protein_GI_number: 15794555 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Neisseria meningitidis Z2491 # 2 351 4 351 352 357 52.0 1e-98 MRKIIHIDMDAFYASVELRERPDLRHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMSQ ARKLCPQVVIIEPNFEKYRAISAQIHSIFQQYTTLIEPLSLDEAYLDVTENLKQIASATE VAMHIREDIFRQTGLTASAGVAPNKFLAKVASDWNKPNGLFVIKPSQVASFIQDLPLKKI PGVGKVTQEKLQQLELHTLGDLQKIEEAVLVHHFGKYGQQLYLYAQGIDNRPVQAERARQ QISKETTFDSDFTLAQCQPYWHGLAEKVWQSLEKKQLNARGVNIKLKLKNFQTLQHSKSF KNPIHSQQDLIQVLFLLLNEMHIPENFQFRLIGIGVYQLQTKADDFQLSLW >gi|333032514|gb|GL891912.1| GENE 98 99347 - 99700 398 117 aa, chain + ## HITS:1 COG:PA5303 KEGG:ns NR:ns ## COG: PA5303 COG0251 # Protein_GI_number: 15600496 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 1 117 1 117 117 122 50.0 2e-28 MTVKRLHVTSRYCEVAISGNLVHLAGQLADDTSVDITAQTQQTLDNIDRLLAEAGTDKSH ILSVMIFLKDIDKDYAAMNAVWDAWISKEHPPARTCVESKLYAPDVLVEMTVVAVLP >gi|333032514|gb|GL891912.1| GENE 99 99846 - 100346 600 166 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00204 NR:ns ## KEGG: ACICU_00204 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 166 1 166 166 266 98.0 2e-70 MYYLITILLLFLTVVMAAKSLSRKHQQDSALKRRAVLSSHEQMTLTRLQTVLPKFTVLAH VSFDALLTTKYAHTRRKYQNMTADFVVLDQNYQVVVVVMLEESGLRRAHQQYERRLLQLA GYRVLSYSTVPDYHELRRDLLTPESEMATLHATPQLERISNAFVKS >gi|333032514|gb|GL891912.1| GENE 100 100660 - 103038 2599 792 aa, chain - ## HITS:1 COG:PA4928 KEGG:ns NR:ns ## COG: PA4928 COG1032 # Protein_GI_number: 15600121 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Pseudomonas aeruginosa # 10 792 3 736 747 1085 66.0 0 MSTAYTMQTAPKALFDYDKYWASCFEPAPFLPMSREEMDQLGWDACDFILVCGDAYIDHP SFVSGVIGRVLEAQGFRVGIIAQPDWTNVESFRVLGKPTIAWGVTAGNMDSMINRYTADR KIRSDDAYSPNNEPNKRPDRAATVYCQRCREAFPDVPVLLGGIEGSLRRIAHYDYWSDKV RRSILMDSKADMLMYGNGERAIIDVMHRLAKGEKIHEITDVRGTAFIINKHNKAAKAKFV EIASNDVDTIGRVDPIINPYVMTEDIDGCEIEKDKGNTLAQYQGFQKEIVANPIVREGDQ LDENTQIVQLKPAQSKAIKHKLPPRELAVIRLPSFEEVANDQVLYAHANRILHLETNPGN ARALVQRHGERDVWINPPPIPLTTEEMDYVFDLPYARLPHPAYGDARFPAFDMIKFSVNI MRGCFGGCTFCSITEHEGRIIQNRSEDSILREIEKIRDTAPNFTGIISDLGGPTANMYRL HCKDPEIEKNCRKPSCVYPGVCQNLHTDHAPLVQLYRKARAIKGVKKILIGSGLRYDLAV LNPEYVKELVQHHVGGYLKIAPEHTEQGPLSKMMKPGIGTYDRFKQMFDRFSKEAGKEQY LIPYFIAAHPGTSDYDMMHLAIWLKKNGFRADQVQTFYPSPMATATTMYYSGKNPLAKVA RYTENVDIVKGEKRRRLHKAFLRYHDPNNWPLLREALKEMGRADLIGNSKQHLIPTYQPK GAEGEYKSARKKNSTVAGDSVKRSGQTVQNKNQHKRPQKGQVLTQHTGLPPRETGEKRPF GGKSKPKSKARG >gi|333032514|gb|GL891912.1| GENE 101 103253 - 104512 1079 419 aa, chain - ## HITS:1 COG:YPO3640 KEGG:ns NR:ns ## COG: YPO3640 COG4222 # Protein_GI_number: 16123782 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 40 410 32 438 448 207 35.0 2e-53 MSKKTLVALLCCASLGLTACNDDNDQDQTSPTENVTEPTLISFAKLPVETYAAGPDSGAY VEGANGIYPPFKGQPVQGFSAALKNEDGSYMAMADNGFGTQDNSSDFLLRIYKIKPDFKT KTKGTGQVTVQSFIQLRDPNKLIPFNIINGNTPERLLTGADFDPESMQRTSDGTYWIGDE FGPYLLHFSADGVLLDAPIPLPNPLNPTQELRSPQNQFNKAQINFVEPLVQQSGGFEGMA ISPDGQYLYPLIEKPIKSIRETERQLLISQFDIKKKAYTGKYYWFQLDSKATNIGDFQLF NDKEGIIIERDATQNNLGGYKKLIRIKLNESGQLVSREDLVDLIKIANPNMLYGTARAGD IGTGQVFAFPFETIEDVIIENGTTLTVFNDNNFPGSTGRNAKLADDNEIIQIRLPKALF >gi|333032514|gb|GL891912.1| GENE 102 104660 - 105064 325 134 aa, chain - ## HITS:1 COG:mll5378 KEGG:ns NR:ns ## COG: mll5378 COG0789 # Protein_GI_number: 13474484 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 1 134 1 134 157 137 50.0 7e-33 MDISEVAKKAKVTTATLRFYEEKGLIKSIGRQGLRRQYGKQVIDQLALIALGRAAGFSLN EIATMFGQDGKPDLDRQKLKDKAEQLEQMAKRLHFISQGLEHAAVCPAENHMECPTFQKF LKAAIAGEYQPTKL >gi|333032514|gb|GL891912.1| GENE 103 105146 - 105631 376 161 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003340 NR:ns ## KEGG: ABBFA_003340 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 161 1 161 161 284 100.0 1e-75 MNTSTLFFQALCLGIGATIVMDIWLLILKIFKVPTLNFAFLGRWVGWIFQGKLVHQSIAK STPMKGEYLLGWIAHYSVGIIFALSFLLIVGSTWLDHPQFYSALLFGLVTVLIPFFIMQP AMGSGFASSKTPHPFLNCLKSLLNHSVFGCGLYLTAKLFQI >gi|333032514|gb|GL891912.1| GENE 104 105648 - 106214 585 188 aa, chain + ## HITS:1 COG:XF1133 KEGG:ns NR:ns ## COG: XF1133 COG0655 # Protein_GI_number: 15837735 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Xylella fastidiosa 9a5c # 4 186 3 187 189 115 37.0 3e-26 MKTVAIIYHSRQGHTQFIAQQIQIGVLSHHNIKADLLNAEDLIESSGILIQYDGLIWGSP TYLGGVSSKLKQLMDITGPLWKKQSFKGKLAAGFTVSSLPAGDKQSTLISIFTFCMQHGM LWVGNPILPEQHQGVAYTQAANRLGSWSGLMAQAEHASNADGFDEGDIKTAQQFGENFAL TLNAYQGT >gi|333032514|gb|GL891912.1| GENE 105 106640 - 107128 328 162 aa, chain + ## HITS:1 COG:BS_yomI_3 KEGG:ns NR:ns ## COG: BS_yomI_3 COG0741 # Protein_GI_number: 16079194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Bacillus subtilis # 34 131 107 205 240 63 39.0 1e-10 MTGCTSLGPNSGSFSWRSSKLSSGLQKAYSVPPSTANRLSPMIIQSADRYNVPPLLLAAV IRQESSYNSNARSPTGAIGLTQIIPSYWQQTCAGNLYDESTNIQCGAYILNHYYQTADSW FKATAYYNVGPTGYERSFWTRHKAKKYARSVKRHQKTLKSAL >gi|333032514|gb|GL891912.1| GENE 106 107184 - 108182 684 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 15 327 1 305 308 268 47 1e-70 MSTDPQFPTPNNLGIAVYSNNAEAIGNTPLVRINRLIKTGATVLAKVESRNPAFSVKCRI GAALIADAEKRGALKEGMHIVEPTSGNTGIALAFVAAAKGYSITLTMPASMSLERRKVLK ALGANLVLTEPAKGMKGAVDEAVRLATEQPEVYFLPQQFENPANPQIHVDTTGPEIWQAT GGQVDILVAGVGTGGTITGISRYFEQVQNKPLYSVAVEPAESPIITQTKKGENITPAPHK IQGIGANFIPKNLDLDLVDEVIPVSSEEAIQWARNCATQEGILVGISSGAALAAAAKIAE RPENAGKTIVVILPDSGERYLSSVLFEGLFDE >gi|333032514|gb|GL891912.1| GENE 107 108316 - 108420 56 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQIGEKVNFGSNYAWALMLQRKFTLDWMLYILSI >gi|333032514|gb|GL891912.1| GENE 108 108389 - 108931 527 180 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_003344 NR:ns ## KEGG: ABBFA_003344 # Name: not_defined # Def: aminoglycoside 2'-N-acetyltransferase(AAC(2')-Ib) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 180 1 180 180 347 97.0 1e-94 MQFKIIAAQDLDRNQRHQIAELCFSAFDEDPWTQYAFMQKAIHVVGILNNQIVSHALWTD RVFTINGSSDVKTAYVEYVTTDYTMRGKGIASQLLKYLVETLTHLEYELAALQPEDEAFY EKLGWTVWKGNLSIKQNTCSYLTDEYEIMLYPLNIQMKDQLSNSSEEDAICADWREGELW Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:16:47 2011 Seq name: gi|333032513|gb|GL891913.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld265, whole genome shotgun sequence Length of sequence - 825 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 68 - 823 252 ## ACICU_01350 SecC motif-containing protein Predicted protein(s) >gi|333032513|gb|GL891913.1| GENE 1 68 - 823 252 251 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01350 NR:ns ## KEGG: ACICU_01350 # Name: not_defined # Def: SecC motif-containing protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 251 27 277 277 489 100.0 1e-137 SKLLENIQEQGDEDLSNFLWKLKTILIIKDRYIKTFFLLKDKKHYEAWVLLERIEIDISF LEKNVDEDFIKKYKLDFYKEIVESWQSLFPYKIFFSIGATIKQYTCSICGHVIRPRNKCI HKKGKLYNGKLCVHVADGGCELKEISMVKNPVQKSCIPMLDYDYSAVDFISERLQSPFDY WKPFKTKKLIDRSEFNTVDENDMCPCKESKKIFKECCFNKEKIEFPHIHIHFSKSPPSNL ATSLIKIGRKL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:16:52 2011 Seq name: gi|333032512|gb|GL891914.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld266, whole genome shotgun sequence Length of sequence - 2133 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 187 169 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 413 - 472 10.7 2 2 Op 1 7/0.000 - CDS 586 - 1680 1030 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 3 2 Op 2 . - CDS 1677 - 2123 545 ## COG4992 Ornithine/acetylornithine aminotransferase Predicted protein(s) >gi|333032512|gb|GL891914.1| GENE 1 1 - 187 169 62 aa, chain - ## HITS:1 COG:YPO1859 KEGG:ns NR:ns ## COG: YPO1859 COG1113 # Protein_GI_number: 16122110 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 22 54 16 48 474 60 78.0 6e-10 MSKNNGKQFLEGDLLGSQHMTEQEEEKLQRSLTNRHIQMIAIGGAIGTGLFMGALLQIVG GD >gi|333032512|gb|GL891914.1| GENE 2 586 - 1680 1030 364 aa, chain - ## HITS:1 COG:YPO1963 KEGG:ns NR:ns ## COG: YPO1963 COG3138 # Protein_GI_number: 16122209 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Yersinia pestis # 1 339 1 343 350 403 57.0 1e-112 MMIIRYIEPRDVNDLYLLAQKAGFGLTSLQPNMEKLAARIERACKTVAGELPKADQVYLF VLEDTELNKVVGVCGIEVALGLKEPWYNFHVGTQVHASEPLSVYNALPTLYLSNDHTNCS ELCTLFLDPDYRLNKNGKFLSKVRFLFLSAFRQYFEETIVAEMRGYSDANGQSPFWNAVG HKFFNIEFTKADYLSGVGQKAFIAELMPRHPLYVDMLPDDAKAAIGIVHPNTRPAYNLLL EEGLRYKGYIDIFDGGATLQADIENLRAIKESQILTVQVVESIPLSLGDEPYIVANDNYE NYRAILVFGTPYQESLQITKAQAKQLKVENGGLVRVLSVHVKQDSNPQIVNKIKETEHLR MAVN >gi|333032512|gb|GL891914.1| GENE 3 1677 - 2123 545 148 aa, chain - ## HITS:1 COG:PA0895 KEGG:ns NR:ns ## COG: PA0895 COG4992 # Protein_GI_number: 15596092 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Pseudomonas aeruginosa # 1 139 266 404 406 166 58.0 1e-41 MLTTDKFAPHFSVGTHGTTYGGNPLASAVAGAVFEFINTPEVLNGVKERHDYYKKALNQL NEKYEVFKAIRGSGLLLGCVLKDEFAGKAKDINNLAGEEGLLSLIAGPNVVRFTPSLIVP FADIDEGLKRFERALARFVELQKDEQAA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:16:53 2011 Seq name: gi|333032511|gb|GL891915.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld269, whole genome shotgun sequence Length of sequence - 2775 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 90 - 117 -0.8 1 1 Tu 1 . - CDS 134 - 2563 2909 ## COG0466 ATP-dependent Lon protease, bacterial type - Prom 2610 - 2669 6.1 Predicted protein(s) >gi|333032511|gb|GL891915.1| GENE 1 134 - 2563 2909 809 aa, chain - ## HITS:1 COG:PA1803 KEGG:ns NR:ns ## COG: PA1803 COG0466 # Protein_GI_number: 15597000 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Pseudomonas aeruginosa # 20 793 7 774 798 832 57.0 0 MSELIMNEKTDLEPQVPSVLPLLALRDVVVYPHMQIALFVGREKSINAVDVARNSDNLVF VVAQKDSLTEEIDHDNLYQYGTVAKIVQVVNHENDENCIKVLIEGLHRSKLKKIIDEDSY LTAEHELSPMTINVDKATQETRLQELRNLFAQYAEAKLRNARELVAAANKIEDLLQLMFF VATRVPLNIEIKQKFLEYDEFEAHLQELMNYLMNQSAEQQIEQTLHDSVKRQMEKNQREY FLNEKMKVIQRELSDMNGGAEDDVAEIEKRLAEADLPEHVRKKAEAEFRKLKAMQPASSE AAVVRNYLEVILDTPWNKASKVSINLNKAQEILDADHYGLDDVKDRIVEYLAVQSRVKKL KGPILCLVGPPGVGKTSLGESVAKATGREFVRMALGGVRDEAEIRGHRRTYIGAMPGKIV QSLTKVGVKNPLFLLDEIDKMAQDYRGDPASALLEVLDPSQNSKFNDHYLDLDLDLSEVM FICTANSMNIPEALLDRMEVIRLPGYTEDEKVNIAERYLVPKAIKNNGLRPKELTIHEEA IRDIVQRYTREAGVRNLEREVSKIARKVVKEAVSKKSKNLQLDVTSANLPEYLGPHKFDF GMAEDEAQVGRVNGLAWTSVGGELLTIEVAAVKGKGKFITTGSLGDVMKESITTAMTVVR TRADELGIEASRFEETDVHVHLPEGATPKDGPSAGLALTTALVSAFTGIAIRPDIAMTGE TSLGGRAMRIGGLKEKLLAAHRGGIKLVFIPQDNVRDLAEIPDNVKEGLEIKAVKSIDEI LPLALTSMPKPLPKTPIVKPVEGSKAARH Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:16:55 2011 Seq name: gi|333032510|gb|GL891916.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld283, whole genome shotgun sequence Length of sequence - 3627 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 2 - 638 174 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 688 - 747 2.1 2 1 Op 2 . - CDS 749 - 2941 237 ## COG4644 Transposase and inactivated derivatives, TnpA family Predicted protein(s) >gi|333032510|gb|GL891916.1| GENE 1 2 - 638 174 212 aa, chain - ## HITS:1 COG:PA3867 KEGG:ns NR:ns ## COG: PA3867 COG1961 # Protein_GI_number: 15599062 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Pseudomonas aeruginosa # 1 187 1 180 191 157 51.0 2e-38 MLIGYARVSKADGSQSLDLQHDALRAAGVERDNIYDDLASGGRDDRPGLTACLKSLRDGD VLVVWKLDRLGRSLAHLVNTVKELSDRKIGLRVLTGKGAQIDTTTASGRMVFGIFATLAE FERDLIRERTMAGLASARARGRKGGRKFALTKAQVRLAQAAMAQRDTSVSDLCKELGIER VTLYRYVGPKGELRDHGKHVLGLALLQIVGGD >gi|333032510|gb|GL891916.1| GENE 2 749 - 2941 237 730 aa, chain - ## HITS:1 COG:YPCD1.90c KEGG:ns NR:ns ## COG: YPCD1.90c COG4644 # Protein_GI_number: 16082773 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, TnpA family # Organism: Yersinia pestis # 144 729 185 770 771 1028 84.0 0 MPDERRLAVLTAFVKAQEISALDEAVDVLDMLILDITRSAKNIGQKKRLRTLKDLDRAAL LLARACTLLLDENTDEAALRQAIFRRIPKDKLAESVGKVNELARPQDTHFQDEMVEQYGR VKRFLSAMLRDLHFQAAPAGEHTLSAIHYLAELSGSKKRILDDAPEQIISGPWKRLVYDR DGRILRAGYSLCLLERLQDSLRRRDLWLENSDRWGDPRQKLLQGAEWQAQRIPVCRALGH PSDGTKAAEQLATRLDDTWKSVASRFACNAAVSISNEGKHPSLTISSLDKLDEPPALIQL NRRVRELIPPVDLTELLLEIDARTGFTREFSHVSESGARAQDLQVSLCATLLAEACNIGH EPLIKHNIPALTRHRLSWVKQNYLRAETLVSANARLVDFQSTLPLAGYWGGGEVASADGM RFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHGIVVPGTLRDSIFVLEGLLEQQ TGLNPVEIMTDTAGSSDIIFGLFWLLGYQFSPRLADAGGAIFWRADKTAHYGALNELARG CVELSKIESQWDEMMRMAGSLKLGTIHASELIRSLLRSSRPSGLAQAIMEVGRVNKTLYL LNYIDDEDYRRRILTQLNRGEGRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNAV VLWNTLYMQEALSHLRKSGETPEEEHLARLSPLIHGHINMLGHYTFSLPEDILKGELRPL NFNTNNELTS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:16:56 2011 Seq name: gi|333032509|gb|GL891917.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld284, whole genome shotgun sequence Length of sequence - 4071 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 5, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 633 618 ## COG5281 Phage-related minor tail protein - Term 648 - 675 -0.1 2 1 Op 2 . - CDS 694 - 906 230 ## AB57_3200 hypothetical protein - Prom 928 - 987 4.1 - Term 1060 - 1090 0.2 3 2 Tu 1 . - CDS 1093 - 1242 85 ## gi|301347803|ref|ZP_07228544.1| hypothetical protein AbauAB0_16180 - Prom 1319 - 1378 2.0 - Term 1323 - 1352 2.1 4 3 Op 1 . - CDS 1387 - 1662 145 ## ABAYE2699 hypothetical protein 5 3 Op 2 . - CDS 1681 - 2214 328 ## AB57_2683 hypothetical protein 6 3 Op 3 . - CDS 2289 - 2525 137 ## p3ABAYE0083 putative phage-related protein; putative transcriptional regulator - Prom 2547 - 2606 5.1 + Prom 2501 - 2560 8.4 7 4 Tu 1 . + CDS 2734 - 3663 559 ## COG3617 Prophage antirepressor - Term 3694 - 3725 2.7 8 5 Tu 1 . - CDS 3780 - 4070 155 ## ABAYE2703 hypothetical protein Predicted protein(s) >gi|333032509|gb|GL891917.1| GENE 1 3 - 633 618 210 aa, chain - ## HITS:1 COG:RSc0873 KEGG:ns NR:ns ## COG: RSc0873 COG5281 # Protein_GI_number: 17545592 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Ralstonia solanacearum # 69 208 89 228 1366 90 40.0 2e-18 MAQEARLVIVIDSERAKRTAQDLSVELDSITKKGDFASKSMDRMSVATRALAGYMAGLLT VGSAISKMDTYTGLQNRLKLVTNNQVELNKATEDTFRIAQKTYSAWDSVLQVYQRFSDNA KTLNLTMDDTARLTETVSKAVAISGASAEAADAALVQFGQALASGTLRGEELNSVMEQTP ALAKAIAKGMGITVGELRSVAAEGKITSQE >gi|333032509|gb|GL891917.1| GENE 2 694 - 906 230 70 aa, chain - ## HITS:1 COG:no KEGG:AB57_3200 NR:ns ## KEGG: AB57_3200 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 70 46 115 115 130 100.0 2e-29 MSAMLSAQEFAKIIATHLIQDWENIELSKTGIAGEKETRYSPKSAYQLLMYGDLGAEITS WILEKSKSIA >gi|333032509|gb|GL891917.1| GENE 3 1093 - 1242 85 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|301347803|ref|ZP_07228544.1| ## NR: gi|301347803|ref|ZP_07228544.1| hypothetical protein AbauAB0_16180 [Acinetobacter baumannii AB056] hypothetical protein AbauAB059_14427 [Acinetobacter baumannii AB059] # 1 49 1 49 49 64 97.0 3e-09 MEHFKPIVELIKVSIEKYGLWQTIIAFLILFSIPILIWKLPEIIAAIKA >gi|333032509|gb|GL891917.1| GENE 4 1387 - 1662 145 91 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2699 NR:ns ## KEGG: ABAYE2699 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 88 1 87 87 131 77.0 9e-30 MSTPQYQTMKESEVCNAIGWGLIVLGIISGFIFILVFGRVEVPRTYYGTETVWSGIMVIT GIGIILNGFLVGYLFQKVASILRYHENKSAS >gi|333032509|gb|GL891917.1| GENE 5 1681 - 2214 328 177 aa, chain - ## HITS:1 COG:no KEGG:AB57_2683 NR:ns ## KEGG: AB57_2683 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 16 177 1 162 162 327 99.0 1e-88 MDYIMKKILLAGFLGLGLAGCATTPQQPSEPVKFEKVYQIDGLNQAQIYDGARQWFAVAF ASANAVIQYEDKASGTIIGKGNMRYPCSGMECLAMTGNERVDFTVRVDTKDGKMRVGYDG LTYSAPSHMSAGIMMPAQNYPITESRKSTPLIISKINTLSDDMAEKIKTQQKVNSNW >gi|333032509|gb|GL891917.1| GENE 6 2289 - 2525 137 78 aa, chain - ## HITS:1 COG:no KEGG:p3ABAYE0083 NR:ns ## KEGG: p3ABAYE0083 # Name: not_defined # Def: putative phage-related protein; putative transcriptional regulator # Organism: A.baumannii_AYE # Pathway: not_defined # 1 74 1 74 89 138 93.0 6e-32 MEVKNNVACLREKAGLTVYELSKRCGFVSGSRVLSNYVTRAEQGHSVKIDTALLIYKELK KAGVCKNFEDVFWLDHMD >gi|333032509|gb|GL891917.1| GENE 7 2734 - 3663 559 309 aa, chain + ## HITS:1 COG:Z1818_1 KEGG:ns NR:ns ## COG: Z1818_1 COG3617 # Protein_GI_number: 15801289 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Escherichia coli O157:H7 EDL933 # 127 187 123 182 188 65 52.0 9e-11 MSNIAQINDTKISIVNFKSVPVVTTAMLADFYGTDTDNIKQNYSRNKERFVEGKHFFKII GEELKKFVGDLKSLANFPAISNKTRSLILWTERGAARHAKMLDTDQAWEVFEQLEDCYFV RKEILAKTHKSEREPLTNAVNLLVAKTKHLNYSDAYKLVHQRFNVQHIDEIPHDVIPVAV EYVHHLIAMYSKAEKQGSLFDEDQFKLLKNLIDAIISQNFATSRIYRAVHMLNNEQGHYL AEYAFKTNIAVLKLTRAMDLRGPLNRKIISDDLKTISYTTGNQHYSDRWFHPLMESGMLA GALRISGGW >gi|333032509|gb|GL891917.1| GENE 8 3780 - 4070 155 96 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2703 NR:ns ## KEGG: ABAYE2703 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 96 10 105 109 176 93.0 3e-43 YASKTPHEIEQIKFLGGRIPDPPEYSYAADSILSAFSTIARSRRYEQGIPLSLDQQAINV YAEHNDLPVAAHIFNDCIFALDNLFLDEAHKKSSKK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:17:13 2011 Seq name: gi|333032508|gb|GL891918.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld286, whole genome shotgun sequence Length of sequence - 1312 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 401 - 751 188 ## COG3231 Aminoglycoside phosphotransferase - Prom 792 - 851 1.7 Predicted protein(s) >gi|333032508|gb|GL891918.1| GENE 1 401 - 751 188 116 aa, chain - ## HITS:1 COG:SMc03094 KEGG:ns NR:ns ## COG: SMc03094 COG3231 # Protein_GI_number: 15966752 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Sinorhizobium meliloti # 1 116 145 261 261 90 41.0 8e-19 MNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCI DVGRVGIADRYQDLAILWNCLGEFSPSLQKRLFQKYGIDNPDMNKLQFHLMLDEFF Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:17:14 2011 Seq name: gi|333032507|gb|GL891919.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld292, whole genome shotgun sequence Length of sequence - 1354 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 345 - 806 509 ## p2ABAYE0009 hypothetical protein - Prom 857 - 916 6.8 2 2 Tu 1 . + CDS 1114 - 1317 126 ## gi|332875041|ref|ZP_08442881.1| conserved domain protein Predicted protein(s) >gi|333032507|gb|GL891919.1| GENE 1 345 - 806 509 153 aa, chain - ## HITS:1 COG:no KEGG:p2ABAYE0009 NR:ns ## KEGG: p2ABAYE0009 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 153 1 153 153 248 99.0 8e-65 MKLAEALLLRSDQQKKIISLKQRINANVLVQDGDQPSEDPNELLKQVFSLIQEFQKLSYA IHETNALTKLNDGRSLLALLTLRDEFVEQHKTLTAAISNTSRESDRYSTREIKWHKVIPV SSLQKQADDISLKLRDLNVLIQSNNWKIDLIEA >gi|333032507|gb|GL891919.1| GENE 2 1114 - 1317 126 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875041|ref|ZP_08442881.1| ## NR: gi|332875041|ref|ZP_08442881.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 67 1 67 67 108 100.0 1e-22 MFNFKIFNKVSTEVLTIKNDLQLNSEVQLINKYKTSTSEEYRKAIVLIFKERGYTWLEMG QLFERSI Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:17:29 2011 Seq name: gi|333032506|gb|GL891920.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld297, whole genome shotgun sequence Length of sequence - 25241 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 14, operones - 7 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 86 - 145 8.7 1 1 Tu 1 . + CDS 254 - 1303 1141 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 1314 - 1343 2.1 - Term 1296 - 1337 9.0 2 2 Op 1 . - CDS 1363 - 2148 934 ## COG0501 Zn-dependent protease with chaperone function - Prom 2185 - 2244 4.8 3 2 Op 2 . - CDS 2259 - 2576 132 ## ABBFA_002398 hypothetical protein - Prom 2635 - 2694 5.4 - Term 2652 - 2680 1.4 4 3 Op 1 4/0.000 - CDS 2699 - 4018 1658 ## COG0104 Adenylosuccinate synthase 5 3 Op 2 . - CDS 4083 - 5249 1475 ## COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis - Prom 5375 - 5434 4.3 - Term 5470 - 5505 1.4 6 4 Tu 1 . - CDS 5525 - 6550 980 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 6691 - 6750 5.2 + Prom 6647 - 6706 5.7 7 5 Op 1 1/0.000 + CDS 6805 - 9456 3130 ## COG0013 Alanyl-tRNA synthetase + Term 9476 - 9517 3.3 8 5 Op 2 2/0.000 + CDS 9522 - 10802 1457 ## COG0527 Aspartokinases + Term 10868 - 10913 11.3 + Prom 10856 - 10915 9.6 9 6 Tu 1 . + CDS 11049 - 11303 369 ## COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing) + Term 11326 - 11363 6.6 - Term 11319 - 11346 0.1 10 7 Op 1 . - CDS 11373 - 11939 747 ## COG0164 Ribonuclease HII - Term 11947 - 11981 3.2 11 7 Op 2 . - CDS 12005 - 12394 550 ## ABAYE2599 hypothetical protein - Prom 12571 - 12630 2.8 + Prom 12548 - 12607 5.0 12 8 Tu 1 . + CDS 12633 - 13190 541 ## COG3038 Cytochrome B561 + Term 13311 - 13377 31.6 - Term 13188 - 13255 18.5 13 9 Op 1 . - CDS 13359 - 14360 1117 ## COG1816 Adenosine deaminase - Prom 14411 - 14470 1.7 - Term 14371 - 14407 4.9 14 9 Op 2 . - CDS 14472 - 15791 1504 ## COG2252 Permeases - Prom 16014 - 16073 4.8 - Term 15960 - 16006 11.5 15 10 Tu 1 . - CDS 16114 - 16341 277 ## ACICU_01146 hypothetical protein - Prom 16366 - 16425 12.4 - Term 16654 - 16703 11.5 16 11 Op 1 1/0.000 - CDS 16710 - 18260 1583 ## COG2072 Predicted flavoprotein involved in K+ transport 17 11 Op 2 1/0.000 - CDS 18284 - 19114 701 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 18 11 Op 3 . - CDS 19180 - 20142 822 ## COG3687 Predicted metal-dependent hydrolase + Prom 20421 - 20480 8.1 19 12 Tu 1 . + CDS 20653 - 21375 945 ## COG1741 Pirin-related protein + Term 21386 - 21423 6.3 - Term 21368 - 21418 11.3 20 13 Tu 1 . - CDS 21440 - 22063 690 ## ABBFA_002416 HTH-type transcriptional repressor Bm3R1 - Prom 22264 - 22323 12.9 21 14 Op 1 1/0.000 + CDS 22588 - 23547 834 ## COG3687 Predicted metal-dependent hydrolase + Term 23556 - 23594 5.1 22 14 Op 2 1/0.000 + CDS 23610 - 24443 895 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 23 14 Op 3 . + CDS 24467 - 25241 757 ## COG2072 Predicted flavoprotein involved in K+ transport Predicted protein(s) >gi|333032506|gb|GL891920.1| GENE 1 254 - 1303 1141 349 aa, chain + ## HITS:1 COG:PA4434 KEGG:ns NR:ns ## COG: PA4434 COG0667 # Protein_GI_number: 15599630 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 1 349 1 345 345 424 57.0 1e-118 MQFKPLGHTGINLPEICLGTMTFGEQNTQQEAFEQLNYALEHGLYFWDTAEMYSVPPKPE TYGATETILGNWFAQHGQRDKVFLASKIAGPGFGGTHIRDGHTKFNSEHISQAIDGSLKR LKTDYIDLYQLHWPERHTNFFGTLAYGNQQAQNDYDTTPLEETLLALQKEINRGRIRYIG LSNETPWGTMKFLQLAENLGVSKFVSVQNPYSLLNRTYEIGMSEIAKYEGVGLLAYSPLA FGYLTGKFRNGARPANARVTLFPRFSRYSNPQSEWATEQYAQLAEKHGLSLTQLALAFIK QQFFVTSTIIGATNLDQLKENIQAFEIELSPEILQGIETIHIQQPNPAP >gi|333032506|gb|GL891920.1| GENE 2 1363 - 2148 934 261 aa, chain - ## HITS:1 COG:NMA0562 KEGG:ns NR:ns ## COG: NMA0562 COG0501 # Protein_GI_number: 15793554 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Neisseria meningitidis Z2491 # 11 257 24 277 293 233 47.0 3e-61 MLMNKKFVLSLCAAGAVTISGCATMADMAGADTATLNAQSAQSFNKMVQEARGKGALDTS SSTYNRINAVFNRLKPYANQMNQTGQPFSWQLAVLKSDTINAYVAPGGKVVFYTGIVNKL NLTDAEIAAVMGHEMTHALEEHAKSKIGAQALTDLALNIGLSQINGGNVSQLGAAAAQLG TQVGVGLPYSRSLESRADQGGLMLMARAGYNPNAAITLWEKMNKLEGSGSSFLSTHPSNA QRINDMRKNLPAALAIYNGRK >gi|333032506|gb|GL891920.1| GENE 3 2259 - 2576 132 105 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002398 NR:ns ## KEGG: ABBFA_002398 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 105 1 105 105 177 100.0 1e-43 MKLQPTISKTIFYSFLFAIGGSPTLAMLIIYGQNYNPDFFMTAFMSLSVLIACVLIPVVL IQNSYLLWKRKNPNLEEKVKTLSHVYLGLNIICLIFWIYLMTLSN >gi|333032506|gb|GL891920.1| GENE 4 2699 - 4018 1658 439 aa, chain - ## HITS:1 COG:PA4938 KEGG:ns NR:ns ## COG: PA4938 COG0104 # Protein_GI_number: 15600131 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Pseudomonas aeruginosa # 1 438 1 430 430 615 68.0 1e-176 MGKNVVVLGTQWGDEGKGKIVDLLTDQAAAVVRYQGGHNAGHTLVVGGKKTVLHLIPSGI LRENVLCLIGNGVVLSPAALIEEMGILEAEGVPVKERLRISPNCPLILPNHIALDQAREK KRGNAKIGTTGRGIGPAYEDKVARRAVRVADLVRGGAALEEKLAEMLELHNFQLTQFYGV EAVKFEDVLALCNQWREVLAPLVIDVTKVLHDYRKEGKAVMFEGAQGSLLDIDHGTYPYV TSSNTTAGGVSSGSGMGPLHLDYVLGITKAYTTRVGAGPFPTELVYDAASDSGDPIGKHL GTVGHEFGASTGRQRRCGWFDAEILRRSVDVNSLSGICLTKLDVLDGLEEVKICVGYENT DSGCVGSSDAVSFECLKPIYETMPGWSESTVGLTSIDQLPANALAYVKRIEQLIECPIDI VSTGPDRAETIILRHPFSA >gi|333032506|gb|GL891920.1| GENE 5 4083 - 5249 1475 388 aa, chain - ## HITS:1 COG:PA4939 KEGG:ns NR:ns ## COG: PA4939 COG3705 # Protein_GI_number: 15600132 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase involved in histidine biosynthesis # Organism: Pseudomonas aeruginosa # 1 385 1 389 394 303 44.0 3e-82 MTISETWLLPDGVADVLPEQAQVIEKLRREAIDFLAVRGYQLVYTPFIEYIESLSSLSES NQDLDLVTFKVIDQLSGRLLGIRADMTPQVARIDAHVRPVEGVARYCYAGTVLHTKPQNF NATRAPLQLGAELYGHDSIEADVEMVDVMLGLIENAYTLQGAHLDLGHVGLFRSLVKYAG LSKNEEHELSDLYQRKALPELAEFTQNLNMGSDFYALGRYASDLDALQAHLSADILKDAE FDAALNALKTTLEQIKNRWPALNVGIDVVELRSYHYHTGLMYAVYAPNRAAPLAQGGRYD GIGEHFGRARPATGFSCDLYALGANQFAEIETVVAPKGTEADLLKAIANARSEGLRVVQL LGNDDLSSIPYATHQLVLQNGQWNIEKI >gi|333032506|gb|GL891920.1| GENE 6 5525 - 6550 980 341 aa, chain - ## HITS:1 COG:YPO0922 KEGG:ns NR:ns ## COG: YPO0922 COG0057 # Protein_GI_number: 16121227 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Yersinia pestis # 3 334 4 328 338 306 45.0 5e-83 MQRIAINGFGRIGRNVLRAWFESPKQFHFEIVAINDIADVHTLVHLFKYDSTHGRFNGKV DITIENEKIYLNIQSNQRLLKVEVLQQKQPELLPWASLKIDVVLECTGLFRSHADATRHL EAGAKRVIIGAAPFDHVDAAIVYGVNHADVKATDQIISSVSCTTQALVPLVKIIDDAFGI ETALMTEIHAVTADQSVLDHAHRDLRRARASGQNIIPTTSSALGALKRVMPKMEDRIDGY SIRVPTINVAAIDLTFIAQSPITVHHINELLIKASQTDYAEIMAVTDEPLVSSDFNHSPY SLIVDLTQTMVVGHQAKVFAWYDNEWGYANRLLDLCDSFKS >gi|333032506|gb|GL891920.1| GENE 7 6805 - 9456 3130 883 aa, chain + ## HITS:1 COG:PA0903 KEGG:ns NR:ns ## COG: PA0903 COG0013 # Protein_GI_number: 15596100 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 6 882 1 872 874 1140 66.0 0 MSTRLMTSAEIREAFLRYFETQGHTRVASSSLVPANDPTLLFTNAGMNQFKDCFLGLEKR DYVRATTSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKRDALKFAWEFLTS EQWLALPKDKLYVTVYHTDDEAYDIWNKEIGLAPERIIRIGDNKGEKYASDNFWAMGDTG PCGPCSEIFFDHGEHIWGGLPGSPEEDGDRFIEIWNNVFMQFNRTADGVLHPLPAPSVDT GMGLERISAVLQHVNSNYDIDLFQHLLKAAANIIGIEDEGQPSLRVVADHARSCCFLIAD GVNPSNEGRGYVLRRIIRRAVRHGNKLGATGTFFYKMLQPLIEVMGQAYPELEARREVIE ATLIREEEQFAKTLEQGLKLLEGELAQLKDKTIPGATVFKLYDTYGFPTDLTADIARERG FIIDEAGFEVEMAAQRQRARDAGKFAVDYNNIVKVEGETQFDGYTNTTGQGQIVAIYKDG VQVDEVSEGDEALIVLNQTPFYAESGGQIGDTGIFKNETGIFEVQDTKKSGGAFVHQGIV TVGNLKTSQNVEAIVKADIREATARNHSATHLLHAALRQILGSHVQQKGSLVASDILRFD FANDQPVSFEQLQQVERLVNAEIIANTAVTTELLDIETAKAKGAMMLFGEKYGDEVRVLS MGSVIDEKNFSIELCGGIHVKRTGDIGLFKITSEGGVAAGVRRIEAVTGTKALEVVQKAD HDIQHINSLLKAQKDQTVERVQANVELVSALQKQIEQLNQKLANFQAADLIDQVQTIAGR QTLITTVQGVDAKALRNLHDSVKSKLENAVIVLAGVEGDKVSLLASVASQYTANLKAGDI IKHLATELGGKGGGKPDLAQGGAPLNEKFGQVMAALPAWLEQK >gi|333032506|gb|GL891920.1| GENE 8 9522 - 10802 1457 426 aa, chain + ## HITS:1 COG:PA0904 KEGG:ns NR:ns ## COG: PA0904 COG0527 # Protein_GI_number: 15596101 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Pseudomonas aeruginosa # 1 416 1 405 412 523 71.0 1e-148 MALIVQKYGGTSMGTPERILNVARRVKRWHDHGHKVVVVVSAMSGETNRLLALAKAITET PDPRELDQMVSTGEQVTISMLAMALNSIGVEAKSYTGRQVGIKTDSAFTKARIESIDTDV MTNDLDAGRVIVVAGFQGFDANGNTTTLGRGGSDTSGVAIAAALKADECQIYTDVDGVYT TDPRVAPKAKKIDRISFEEMLEMASLGSKVLQIRSVEFAGKYQVPLRVLSSFDNDDDGAF DDEFKENVGTLITTEAEDTMEQPIIAGIAFNRDEAKLTILGVPDEPGIASKILSPVSDAN IEVDMIVQNVEEDGTTDFTFTVNRVDLAKAEKILNETAKNIGAREVSTRDDIVKVSIVGV GMRSHAGVASKMFTALADEGINILMISTSEIKVSVIIDEKYLELAVRCLHTAFGLDREHG ESSARA >gi|333032506|gb|GL891920.1| GENE 9 11049 - 11303 369 84 aa, chain + ## HITS:1 COG:VC0548 KEGG:ns NR:ns ## COG: VC0548 COG1551 # Protein_GI_number: 15640570 # Func_class: T Signal transduction mechanisms # Function: Carbon storage regulator (could also regulate swarming and quorum sensing) # Organism: Vibrio cholerae # 1 56 1 56 65 95 89.0 3e-20 MLILTRRVGETLMIGDQVSVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQHERAMHEH LQHLDQDYQVSYEDDNYAQKNFNR >gi|333032506|gb|GL891920.1| GENE 10 11373 - 11939 747 188 aa, chain - ## HITS:1 COG:VC2246 KEGG:ns NR:ns ## COG: VC2246 COG0164 # Protein_GI_number: 15642244 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Vibrio cholerae # 2 188 20 205 206 240 67.0 9e-64 MFVAGVDEAGRGPLVGSVVAAAVILDPNNPILGLNDSKKLTEKKREKLFIEIQEKALAWS IAEATHAEIDELNILQATFLAMQRAVEGLKTQPQKVIVDGNQIPKGIIIPCEAIVGGDAS HAEISAASILAKVTRDRQMAELDQQYPLFGFAKHKGYPTKAHFEAIAAHGVIDQHRRSYA PVKRALGL >gi|333032506|gb|GL891920.1| GENE 11 12005 - 12394 550 129 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2599 NR:ns ## KEGG: ABAYE2599 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 129 39 167 167 148 100.0 8e-35 MKKLMLAVAPVVLALTACATTTGTGTGGASAQTTTQQLGVAALKVAVNAKCITEINNVAA WKTATKYMTAEQRDSIQTNVCGCVSEKAPNSVTAVELAAAALDVNARATIVNQVVSKTVN ACVAEALQK >gi|333032506|gb|GL891920.1| GENE 12 12633 - 13190 541 185 aa, chain + ## HITS:1 COG:RSc2719 KEGG:ns NR:ns ## COG: RSc2719 COG3038 # Protein_GI_number: 17547438 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Ralstonia solanacearum # 9 180 22 190 195 97 34.0 1e-20 MPASTSQYYTRTAQILHWIMAIIFITAWVIGFYSGNFLSYDVDGSFKGDVITLHKNIATT IIFLVVIRLFWRYTHPAPQLPDTMSPTMKTLAHTGHLLLYVILVALPVTGCLFSWSAGHP APVLYLFEIPRLVQDNPELLAIVKPLHIYISWFAGLLIVGHVLAALKHHFVDKDNVLNSM TKQPK >gi|333032506|gb|GL891920.1| GENE 13 13359 - 14360 1117 333 aa, chain - ## HITS:1 COG:PA0148 KEGG:ns NR:ns ## COG: PA0148 COG1816 # Protein_GI_number: 15595346 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Pseudomonas aeruginosa # 5 317 3 315 316 432 64.0 1e-121 MNQVELIQALPKAELHVHIEGTFEPELMFAIAQRNQIQIPYKSVEEVKQAYNFHNLQSFL DIYYAGANVLVHEQDFYDLAWAYFEKCAEDRVVHTEMFFDPQTHTDRGIAFATVINGLKR ACADAKAKFGISSQLIMCFLRHLSEEAAFETLEQALPFKQDIIAVGLDSSEVGHPPAKFE RVFAKAREEGFLIVAHAGEEGPPEYVWEALDLLKVNRIDHGVRSEEDEQLMARLINEKMP LTVCPLSNLKLCVVKDMKDHNIRRLLQKGVHVTVNSDDPSYFGGYMNDNFFAIQQALDLT NDELKQLAINSFEASFISDEEKQKWISEIQKIS >gi|333032506|gb|GL891920.1| GENE 14 14472 - 15791 1504 439 aa, chain - ## HITS:1 COG:NMB0428 KEGG:ns NR:ns ## COG: NMB0428 COG2252 # Protein_GI_number: 15676340 # Func_class: R General function prediction only # Function: Permeases # Organism: Neisseria meningitidis MC58 # 11 438 9 436 436 538 72.0 1e-153 MAAPNSSAGWLERLFKLSDNKTTFRTEVLAGVTTFLTMCYIIIVNPLILSETGMDHGAVF VATCLAAAIGCLVMGIIANYPIALAPGMGLNAYFTYSVCMGMGVPWQTALAAVFVSGVVF LAISFFKIREAIVNAIPMSLKFAIGGGIGLFLALIALKNAGIIVANQATLVGLGDIKQPT VLLALFGFLLIVILHQLKVRGAIIISILVVTAIATALGLNEFKGVVGEIPSIAPTFMQMD FEGLFTASMVGVIFVFFIVDLFDSTGTLVGVSHRAGLLQDGKLPRLKKALFADSTAIVAG AALGTSSTTPYIESASGVAAGGRTGLTAVVVAFLFICCLFLAPLAQSVPGFATAPALLFI GVLMIQGITHIDWDDITEAVPAFLTIVFMPFAYSIADGIAMGFISYALVKLFTGKAKTVP YMVWIIAALWVFKFIAFGG >gi|333032506|gb|GL891920.1| GENE 15 16114 - 16341 277 75 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01146 NR:ns ## KEGG: ACICU_01146 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 75 1 75 75 134 100.0 8e-31 MINKVLIVLCVSIVFVLGYWAYLDTQNKRHQELMRIIQEAEKNLQTIERNPNRVSHSNLA SYNLQKYISDKKIFF >gi|333032506|gb|GL891920.1| GENE 16 16710 - 18260 1583 516 aa, chain - ## HITS:1 COG:PA1538 KEGG:ns NR:ns ## COG: PA1538 COG2072 # Protein_GI_number: 15596735 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 11 488 16 499 527 405 42.0 1e-113 MVTKPRTNTRTRKTQEVAHIYDTFIVGAGISGLAAAIKLNEAGLTNFKIIEKASRVGGTW RENTYPGCGCDVPSALYSYSFAPSAKWSHLFARQPEILSYLEDVSREFDIESLIEFNTEL LKAEWDNVKNVWKLETSSGLYITKTVLFATGPITEAQIPRIEGLDTFTGEMFHSAKWNHD YDLTGKRIAVIGTGASAIQFVPQIQPKAKELFVFQRTAPWVLPKPDTDLGELSKSIIAKY PKIQATWRQTVAGALNVINFGLRNPKALKPVNFAAKQLLKLQIKDPVLRKNVTPNFDIGC KRILFANNYYPALQASNTTLIPHGLVKVEGNTVIAANGERHEVDVIIWGTGFEVSHPPIG KRVHNEKGECLAELWKDSSPEAYLGTNIENVPNAFLMLGPNVLVYDSFIGLAEAQLQYIV DGLLQMKAKGIAKLSVKSEIIKKHNELVQKHLQTTVFNSGGCKSYYLDANGRNFAAWPWS LKKLKQRLHHLNLEEYDVIYEADLVKVKPKVEEVAG >gi|333032506|gb|GL891920.1| GENE 17 18284 - 19114 701 276 aa, chain - ## HITS:1 COG:PA3277 KEGG:ns NR:ns ## COG: PA3277 COG1028 # Protein_GI_number: 15598473 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 17 261 6 248 270 169 37.0 6e-42 MILFGKKDQPSRNAYAVVTGAGSGIGRSFAVELAKRGGSVVCADINLEAAEETVKLIEQL GQKAFAVQCDVGQAEQVQTLADQAEQLLDHPVTLIINNAGVGLGGKFDEMSLEDWKWCMH VNLWGVIHGCHAFVPKFKKLGYGAIINVASAASYTAAPEMSVYNVTKAGVLALSETLSAE LRKFNIKVNVLCPTLVPTNIIKNGRIPGRYSKLADHALMNYAMTTSDAVATLTLNRLDRG QLYTTPQIDAKLFWLMKRTSPTLYAKFLGLSYQLFK >gi|333032506|gb|GL891920.1| GENE 18 19180 - 20142 822 320 aa, chain - ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 27 297 11 274 278 154 34.0 3e-37 MVAQAIRNIISPKSVIAQYQKIDFSNKGTIPIRHLNIGFDGKEIDIEFYVNNQFATLFFA TLSVFLTYGEDLVIETARHHREFIQDPILKQRVTSLIGQEAIHSKLHNEFNDAIKELEYP VDFYRFLGENFFKYVFLKFPQPLKLSLMAGIEHFTAVLAEYMMKHEKNFYYTDDAKSRAL WMWHMLEESEHKDIAYDVYQVLNGNYPLRATGFLMAFITILGLIPTATLFVPLLRKPKEL LTRKFWKDARRGVNLIFSPKDGVFGSTIGQIFDYLRPDFHPNDHDTTEYLEYYKKKLLNE GGAIAPYFVKEFTPPVRAVS >gi|333032506|gb|GL891920.1| GENE 19 20653 - 21375 945 240 aa, chain + ## HITS:1 COG:RSc2208 KEGG:ns NR:ns ## COG: RSc2208 COG1741 # Protein_GI_number: 17546927 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Ralstonia solanacearum # 1 231 1 231 232 251 50.0 7e-67 MFDMRLSHERGAAHHGWLQSKHTFSFANYWDPKQVGFSDLLVINDDTVAPSKGFGTHPHR NMEIISYVLEGALEHKDSMGTGSVIVPGDIQLMSAGRGVAHSEFNHSAQENVHFLQIWVV PNEVNTTPGYQQLHISEEDKRGKLHLMISPKGGEKTLSIKQDINIYSGLFNGEETAEFSI PEGRYVYLHVAKGRIDVNGKTFNTGDAARIRDGGKLSFTNGDNAEILIFDMRPEEIPTMP >gi|333032506|gb|GL891920.1| GENE 20 21440 - 22063 690 207 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002416 NR:ns ## KEGG: ABBFA_002416 # Name: not_defined # Def: HTH-type transcriptional repressor Bm3R1 # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 207 1 207 207 391 100.0 1e-108 MSTRKPRQARAKVTVDTIIEAGFIAVALHGPSGTTTRHIAEIAGVSVGSLYEYFKNKEEI YDAMNHYFVSEILDMIKELTPTILELELEPVIEMIFYTFSDLLKKNNDRYLTVLRYAGEL QYDKYIPKIEQALMEVIMKYMMHNPKYLKINNLPVITYICINSGIFNVARHLILPNPFIS FDEMVQGLTTMIMSYINTEMARSEDQS >gi|333032506|gb|GL891920.1| GENE 21 22588 - 23547 834 319 aa, chain + ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 27 297 11 274 278 159 35.0 7e-39 MISTTVKKSLNKIKFYREIELPDFASKKSIPIRHLNIGFEGKEIDVEFYMNNQFATMFFA TLSVFLTYGEDLVIETARHHREFIQDPVLKQRVTSLIGQEAIHSKLHNEYNDALKDVEYP VDLYRFLGENFFKYVFLKFPQPLKLSMMAGIEHFTAVLAEYMMKHEKNFYYSDDAKSRAL WMWHMLEESEHKDIAYDVYQLLNGSYPLRASGFFLAFFTILGLIPATTLFIPVLRKPQEM LTRKFWKDARRGVGLIFGPKDGVFGSTIGQIFDYLRPDFHPNDHDTTEYLEYYKDKLLKE GGAIAPYFVKEFTPPVRLS >gi|333032506|gb|GL891920.1| GENE 22 23610 - 24443 895 277 aa, chain + ## HITS:1 COG:PA3277 KEGG:ns NR:ns ## COG: PA3277 COG1028 # Protein_GI_number: 15598473 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 18 275 6 262 270 179 37.0 5e-45 MILFGKKKVKPSQKAYAVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVTLLEQ QGAKAFAMRCDVGDAEQVNHLAETAEILFGHPVTLVINNAGVGLGGKFDELSLEDWNWVM NINLWGVIHGCHAFVPKFKKLGYGAIINVASAASYTAAPEMTAYNVTKAGVRALSETLSA ELRKFNIKVNVLCPTLVPTNIIKNGRIPGRYSKLADHALMNYALTTSDDVAKLTLNRLDQ DELYTIPQIDAKLFWLMKRASPSLYTKFLGTSYKLFK >gi|333032506|gb|GL891920.1| GENE 23 24467 - 25241 757 258 aa, chain + ## HITS:1 COG:PA1538 KEGG:ns NR:ns ## COG: PA1538 COG2072 # Protein_GI_number: 15596735 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Pseudomonas aeruginosa # 26 252 30 257 527 235 48.0 7e-62 MTAQMKTNASAKKAVNSPSHIYDTFIVGAGISGIAAAIRLDQVGYTNYKIIEKAGRVGGT WRENTYPGCGCDVPSALYSYSFAPSAKWSHLFARQPEILSYLEDVSNEFNITSKIEFNNE LLNAAWDESHHLWVLDTTTGQYLSRTVIFATGPITEAQIPRLEGLDTFTGEMFHSAKWNH DYELTGKRIAVIGTGASAIQFVPQIQPKAKELFVFQRTAPWVLPKPDTDLGEFSKSIIAK YPAIQASWRALLQIVGGD Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:17:42 2011 Seq name: gi|333032505|gb|GL891921.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld303, whole genome shotgun sequence Length of sequence - 1634 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 24 - 545 -93 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Prom 634 - 693 5.2 2 2 Tu 1 . + CDS 728 - 1588 433 ## COG2367 Beta-lactamase class A Predicted protein(s) >gi|333032505|gb|GL891921.1| GENE 1 24 - 545 -93 173 aa, chain + ## HITS:1 COG:YPCD1.91 KEGG:ns NR:ns ## COG: YPCD1.91 COG1961 # Protein_GI_number: 16082774 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Yersinia pestis # 3 171 15 183 183 235 79.0 4e-62 MPSLDIQIRALKDAGVKANRIFTDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRD TADMIQLIKEFDAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQE AKLKGIKFGRRRTVDRNVVLTLHQKGTGATEIAHQLSIARSTVYKILEDERAS >gi|333032505|gb|GL891921.1| GENE 2 728 - 1588 433 286 aa, chain + ## HITS:1 COG:SMa1952 KEGG:ns NR:ns ## COG: SMa1952 COG2367 # Protein_GI_number: 16263521 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Sinorhizobium meliloti # 30 279 22 274 281 201 46.0 1e-51 MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRP EERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVREL CSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTM PAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGS RGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:17:55 2011 Seq name: gi|333032504|gb|GL891922.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld306, whole genome shotgun sequence Length of sequence - 44807 bp Number of predicted genes - 40, with homology - 40 Number of transcription units - 25, operones - 9 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 91 - 126 3.1 1 1 Tu 1 . - CDS 156 - 275 136 ## AOLE_14870 hypothetical protein - Prom 308 - 367 7.0 - Term 326 - 377 11.5 2 2 Op 1 . - CDS 391 - 879 259 ## ACICU_01074 hypothetical protein - Prom 899 - 958 8.1 3 2 Op 2 . - CDS 969 - 2342 821 ## COG0582 Integrase - Prom 2372 - 2431 3.5 4 3 Op 1 . - CDS 2770 - 3054 340 ## ACICU_01076 hypothetical protein 5 3 Op 2 . - CDS 3051 - 3638 670 ## ACICU_01077 hypothetical protein - Prom 3813 - 3872 5.4 + Prom 3595 - 3654 7.5 6 4 Op 1 5/0.000 + CDS 3676 - 4305 741 ## COG3079 Uncharacterized protein conserved in bacteria 7 4 Op 2 8/0.000 + CDS 4373 - 5695 1587 ## COG0006 Xaa-Pro aminopeptidase 8 4 Op 3 8/0.000 + CDS 5727 - 6935 1313 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 9 4 Op 4 . + CDS 6932 - 8164 1404 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Term 8182 - 8227 1.2 + Prom 8166 - 8225 6.7 10 5 Tu 1 . + CDS 8374 - 8625 468 ## ABBFA_002506 hypothetical protein + Term 8626 - 8677 9.2 - Term 8624 - 8653 1.4 11 6 Tu 1 . - CDS 8680 - 9081 401 ## COG0789 Predicted transcriptional regulators - Prom 9112 - 9171 4.6 + Prom 9065 - 9124 2.9 12 7 Tu 1 . + CDS 9147 - 9788 681 ## COG1230 Co/Zn/Cd efflux system component + Term 9798 - 9846 11.6 - Term 9793 - 9826 3.1 13 8 Tu 1 . - CDS 9847 - 10455 417 ## COG1279 Lysine efflux permease - Prom 10475 - 10534 6.6 + Prom 10463 - 10522 8.6 14 9 Tu 1 . + CDS 10557 - 11447 834 ## COG0583 Transcriptional regulator + Term 11681 - 11718 1.1 15 10 Op 1 . - CDS 11450 - 11836 357 ## ACICU_01087 hypothetical protein - Prom 11869 - 11928 5.4 16 10 Op 2 . - CDS 11930 - 12766 979 ## COG0313 Predicted methyltransferases - Prom 12850 - 12909 8.6 + Prom 12846 - 12905 7.1 17 11 Op 1 1/0.333 + CDS 12960 - 13361 238 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 18 11 Op 2 . + CDS 13442 - 14149 871 ## COG2823 Predicted periplasmic or secreted lipoprotein 19 11 Op 3 . + CDS 14153 - 15016 773 ## COG0657 Esterase/lipase + Term 15108 - 15149 0.2 - Term 14873 - 14913 4.4 20 12 Op 1 . - CDS 15039 - 15782 640 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 21 12 Op 2 . - CDS 15782 - 17425 1584 ## ACICU_01093 hypothetical protein - Prom 17497 - 17556 8.0 22 13 Tu 1 . - CDS 17560 - 18939 1573 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 19021 - 19080 2.7 + Prom 19018 - 19077 5.5 23 14 Op 1 1/0.333 + CDS 19172 - 22378 3729 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 24 14 Op 2 11/0.000 + CDS 22394 - 24229 1321 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 25 14 Op 3 11/0.000 + CDS 24292 - 25311 878 ## COG4174 ABC-type uncharacterized transport system, permease component 26 14 Op 4 11/0.000 + CDS 25311 - 26321 828 ## COG4239 ABC-type uncharacterized transport system, permease component 27 14 Op 5 1/0.333 + CDS 26299 - 27888 707 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 27914 - 27973 11.3 28 15 Tu 1 . + CDS 28074 - 29318 1495 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 29336 - 29377 6.2 - Term 29323 - 29364 6.2 29 16 Tu 1 . - CDS 29377 - 31491 2269 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 31588 - 31647 10.0 - TRNA 31675 - 31750 56.4 # Glu TTC 0 0 30 17 Op 1 1/0.333 - CDS 31769 - 32431 566 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 31 17 Op 2 . - CDS 32416 - 33450 1022 ## COG0418 Dihydroorotase - Prom 33471 - 33530 6.8 + Prom 33433 - 33492 5.2 32 18 Tu 1 . + CDS 33600 - 34862 769 ## COG2199 FOG: GGDEF domain + Term 34883 - 34912 2.1 - Term 34863 - 34908 7.8 33 19 Tu 1 . - CDS 34921 - 36279 1761 ## COG0137 Argininosuccinate synthase - Prom 36455 - 36514 8.0 + Prom 36434 - 36493 5.8 34 20 Tu 1 . + CDS 36545 - 38575 2260 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 38756 - 38798 8.7 + TRNA 38661 - 38750 65.8 # Ser TGA 0 0 35 21 Op 1 3/0.167 - CDS 38915 - 40006 952 ## COG0501 Zn-dependent protease with chaperone function 36 21 Op 2 . - CDS 40027 - 41115 907 ## COG4269 Predicted membrane protein 37 22 Tu 1 . + CDS 41959 - 42834 1062 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 42865 - 42903 1.4 38 23 Tu 1 . - CDS 42959 - 43240 228 ## ABBFA_002472 hypothetical protein - Prom 43302 - 43361 4.3 + Prom 43236 - 43295 7.8 39 24 Tu 1 . + CDS 43418 - 43597 60 ## ACICU_01112 hypothetical protein + Prom 43929 - 43988 80.4 40 25 Tu 1 . + CDS 44012 - 44584 284 ## ACICU_01115 TetR family transcriptional regulator Predicted protein(s) >gi|333032504|gb|GL891922.1| GENE 1 156 - 275 136 39 aa, chain - ## HITS:1 COG:no KEGG:AOLE_14870 NR:ns ## KEGG: AOLE_14870 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 39 1 39 211 80 92.0 2e-14 MCANYEPINKDRVHLLDLFEPTFDYKNGVYPGYDCPLIF >gi|333032504|gb|GL891922.1| GENE 2 391 - 879 259 162 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01074 NR:ns ## KEGG: ACICU_01074 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 162 1 162 162 301 100.0 7e-81 MKKIFLAALATIGLQACTTPYQEMGASGGVEATIIDDNVFQVRASVNGYTHKSIANQYAL RKAAEVSKSLGCSYFSAINNTSQSYNQNISKVDAGLKTTPNGVYYVSSAGTQYKLIKPSR NNTYVCFNEKPNTVLPGLIYNVKYVLGSPMPTGKFKVPNSWR >gi|333032504|gb|GL891922.1| GENE 3 969 - 2342 821 457 aa, chain - ## HITS:1 COG:XF0631 KEGG:ns NR:ns ## COG: XF0631 COG0582 # Protein_GI_number: 15837233 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Xylella fastidiosa 9a5c # 6 382 3 371 413 140 30.0 6e-33 MAQHIKFTKSVIDSIPLSEEKQIFYRDTVTIGFGLCVGKTKSYFAEKKMPNGKSKRKVIG KHGVYTLEQARTEAKRLLILMDEGVDPVKQKRDLRASAIQNDALQKLVPTLSEAYQYYKL RKKLAETSLIAYDGCIENYFSDWKDLKLDQITSAMIIDRHLKLSKASPSRANLASKFLHA LFNHTISRYKDESGNKILNIKNPVVIVKEEKAFNKIKRRKGHVRADQREAWALAVATTYW MGEQNNDFRAYTNQDFLFLLALTGFRRSEAESVEWKNVDLQFGTIKIINTKNHEDLLLPM GDTLWHIMRERKKRAGDNKYVFTDRNGVSHISDRRAARDKVTENSGIEFTFHDLRRTFGT IANSLAIGSYTIKRLINHTTDDDDNDVTDGYIQVSFDDLKKAMNMIEDVIISEPVKALIK SRLYFEKNESRNQAQELINHHIQVLDNFKMAGQILDF >gi|333032504|gb|GL891922.1| GENE 4 2770 - 3054 340 94 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01076 NR:ns ## KEGG: ACICU_01076 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 94 1 94 94 125 100.0 7e-28 MSEQVMVELRLIEQTFRLATTSDKREELERAAELLNEKFNDMRRSAPRVEHNKLVIMVAL QLTQEVLSLNKSLQEYTHCERLLQAILEDVEQIV >gi|333032504|gb|GL891922.1| GENE 5 3051 - 3638 670 195 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01077 NR:ns ## KEGG: ACICU_01077 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 195 1 195 195 214 100.0 2e-54 MIAILCDLVMLEQLQRLQAHIGVLKTRLHHLESENSALSEAKELAETEHHAQVVQKNSII TKKQEEIETLTEQLTQLQGQFQQLNQDANTLAERYSRLEKSTTDLKNRFQEILAERNELR VTKEKLQSQQRQTQQELHDLQQDRDRLLQKNELAKAKVEAIIQRLAILGTAQDQHAQEIQ QLAHPNAEAGEETQS >gi|333032504|gb|GL891922.1| GENE 6 3676 - 4305 741 209 aa, chain + ## HITS:1 COG:PA5225 KEGG:ns NR:ns ## COG: PA5225 COG3079 # Protein_GI_number: 15600418 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 23 166 23 167 184 77 34.0 2e-14 MQDDISGWTDWNAHFEGIEEISSPSELHGLLTGIVCVTEAPTRAEWSQILTTLNVPELSE DALALLTDEAEDVVHALSEDELDYLPMLPDDEHLLQERVQALSDWCAGVVLGFGLASGHV RGDERELIEHLQDVAAVEFEDSDNDEEGESSYEELYEFVRLIPVSLSIGRKKITVAESSL LKNFHAKSKTAALGTDQNIVEMFTPHRPS >gi|333032504|gb|GL891922.1| GENE 7 4373 - 5695 1587 440 aa, chain + ## HITS:1 COG:PA5224 KEGG:ns NR:ns ## COG: PA5224 COG0006 # Protein_GI_number: 15600417 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Pseudomonas aeruginosa # 1 440 2 441 444 454 52.0 1e-127 MKLPQADFQHRRDRLAEKMGPNSIAIIATREEMYRNRDADYKFRADSSFFYLTGFAEPEA VAVIETFEDVTDYSYSLFCRERNREMEIWNGYRAGIDGAIEDYDADEAYAIDLLDEEIIE KLLNKERLYYRIGHNAAFDARVSQWIKKADAEHRHQSAPAQLVQLDRIVDEMRLIKSPQE LELMQIASTISAQAHTRAMQTVRPGMMEYALEAELNYIFGQNGCVPSYNSIVGGGANACI LHYVENNQPLKDGDLVLIDAACEYEFYASDITRTFPVNGKFSAEQKALYEVVLASQYAAI DAVRIGNSYREPHEVAVKILTEGLVDLGLLNGDINELIETEAYRQFYMHGTGHWLGMDVH DVGSYKKGEDWRQYEEGMVVTVEPGLYIAPDDESVDKKWRGIGIRIEDDVVATSKGPRVL TADVVKNIADIEHLMAQAKS >gi|333032504|gb|GL891922.1| GENE 8 5727 - 6935 1313 402 aa, chain + ## HITS:1 COG:PA5223 KEGG:ns NR:ns ## COG: PA5223 COG0654 # Protein_GI_number: 15600416 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 7 402 8 391 394 227 38.0 3e-59 MQQQVIIVGGGMVGLSLSLMLAKANIAVKLLEAVKYPNYDDQNVAPYHSSFDARNTALSR RSVQIYQKLGLWDALQQHATPILQVHITEQGSFGKARLIAEQEKVESFGQVIENAWLGRV LLTQVRQQPLIELIDGVQVTALTQDTEQVHIEAKRGDEVLKLESKLLIAADGRDSFCRQA IGVGVDVHDYDQVAIVTTVQTSKPHEHVGFERFSALGPLALLPLPGEYRRSVVWPVKKGT EGEWLGEENDQHFLDALQKTYGDRAGKFEKTGKRFSYPLSQVLAHKQAVGRVILMGNAAH TIHPVAGQGFNLCLRDADVLLRYLVNQLSASDDIGNPDNLLAYEQARLSDQQRVIKFCDT VVRGFSNQNPLLKLIRNTGLIAFDVIPGVKPLVANYAMGLKA >gi|333032504|gb|GL891922.1| GENE 9 6932 - 8164 1404 410 aa, chain + ## HITS:1 COG:PA5221 KEGG:ns NR:ns ## COG: PA5221 COG0654 # Protein_GI_number: 15600414 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 6 400 4 395 405 241 39.0 1e-63 MSEVLDVVIVGGGLVGGLTALLLAQGGVQPTVLDAAPVLDVEKTLSVMNPRVLALSQATI HLLKAVNVWDDLARQMPYTGMQVWNLNGYGEINFGHESVQRPMPEQALGSMVEPSVLNVA IQQKMLEQLTDYRTQVRVTRIEQGVGCWHIQLADGTALKTKLLIGADGANSFVREQAFID LDVLDYKQAAISCAIKTSKPHHYVARQIFLPTGPLAYLPMASLEESENGYWQSIVWTLPD DYTDEYSALSDSEFMQLLTRESQHMLGEVLDVRSRAQFPLKARAAKQYVKAGLALIGDAA HVIHPLAGQGVNIGCLDAAILCDALLHDLGRGVWAHEQTLMRYEHRRKGQNDAMMHSMSA IGWLESSELFPLIWARNVGLKQVEQISFLKESFMQQANGLGALQNTQYSR >gi|333032504|gb|GL891922.1| GENE 10 8374 - 8625 468 83 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002506 NR:ns ## KEGG: ABBFA_002506 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 83 1 83 83 89 100.0 4e-17 MTDINDYEDAEDSAVDEDEAKAAESGAADEEAGNLTDADLAEAETLTVTAKQKQRQALED EVAAFLARGGRITEVPPDEHSDR >gi|333032504|gb|GL891922.1| GENE 11 8680 - 9081 401 133 aa, chain - ## HITS:1 COG:RSp0320 KEGG:ns NR:ns ## COG: RSp0320 COG0789 # Protein_GI_number: 17548541 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Ralstonia solanacearum # 3 133 13 143 170 107 38.0 7e-24 MSLSIGQLSKKADVPIDTIRYYEKVGVLDRIQRSENNYRVYTDQTLADLLFIKHCRELDI SLSDIKTLKEMKAQPKRACTEVDNLVNKYLIEVSEKIERLLLLKETLIDLKQHCSTDRTV DECGILKELQNHP >gi|333032504|gb|GL891922.1| GENE 12 9147 - 9788 681 213 aa, chain + ## HITS:1 COG:PM1942 KEGG:ns NR:ns ## COG: PM1942 COG1230 # Protein_GI_number: 15603807 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Pasteurella multocida # 1 205 1 204 204 185 47.0 6e-47 MAGCGCASTCSPTKKASPRFRKALWIALVINALMFVVEIVGGYKAQSVSLWADALDFAGD AANYALSLVVLSMSLYWRATAALVKGITMAAFGFFVIAKVVWSFFHGVSPEPMVMGAIGV IALIANVSVALMLYAFRDGDANMRSVWLCSRNDSIANIAVVLAAVGVFGTGTIFPDLFVA FVIAYLGVSSGYAVIKQSLQERKQSKLMLGSEA >gi|333032504|gb|GL891922.1| GENE 13 9847 - 10455 417 202 aa, chain - ## HITS:1 COG:AGc1690 KEGG:ns NR:ns ## COG: AGc1690 COG1279 # Protein_GI_number: 15888266 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 202 1 200 202 179 49.0 3e-45 MVMLSLSVFFKGLGIGSGLIVAIGAQNAFVLKQGLKQQYVFWLCLICALSDSILIACGVL GFAEIMTASPILITVAKYLGATFLFVYGAKAFYAAFKTNQGMELDSSQKQTLTQALITCL AFTWLNPHVYLDTIVLIGSVATQLEDKISFALGSILASWIFFFSLGYGARFLKPLFINPK AWKILDFMIGCVMWSIAISLLI >gi|333032504|gb|GL891922.1| GENE 14 10557 - 11447 834 296 aa, chain + ## HITS:1 COG:AGc1691 KEGG:ns NR:ns ## COG: AGc1691 COG0583 # Protein_GI_number: 15888267 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 295 19 315 319 210 38.0 2e-54 MLDSKQCEAFLAVAEVGSFDAAGEHLCITPSAVSLRVQALEKYLGQILIIRGRPCVLTQA GQTLLQHLRHTRLMEQNLLQGLMGKSSESEFYKIALASNADSLATWLLPSIQQTLFKEKI VLELKIDDQSHTHTLLETGQVNACITAEEQVMAGCLAQPLGKMRYKMLASAEFVNRWFSG GVNREVLRKTPAVIFNHKDLMHSEVLLKGYGLPMQSYPYSFIPATDAFVKAIQLGLGYGM VPELQVQPLLENGILVDIMPEAQLDVPLYWHHWKRQSKQLDVLTETIVESAKQILR >gi|333032504|gb|GL891922.1| GENE 15 11450 - 11836 357 128 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01087 NR:ns ## KEGG: ACICU_01087 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 128 1 128 128 224 100.0 9e-58 MTESLGKLGPHEGQELELLLSGKKPIAYFYELLPIEFIKHLEQGSLSMLSKDIETSLPFP FSIMLIYKDASLADLNELMLCIERSLKATQLEERLELDRRIGQLLGYSTQDIEFYIQHIS NRHLKTKI >gi|333032504|gb|GL891922.1| GENE 16 11930 - 12766 979 278 aa, chain - ## HITS:1 COG:PA4422 KEGG:ns NR:ns ## COG: PA4422 COG0313 # Protein_GI_number: 15599618 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Pseudomonas aeruginosa # 1 274 1 277 282 278 55.0 6e-75 MSAQLFVVATPIGHLDDMTFRAIDILKSVSVVAAEDTRQSAQLFKHYNISTPLTACHDHN ESNKIEQLVQKLLAGENIALISDAGTPLISDPGFKLVRAAQEHGIRVVPVPGACAAIAAL SAVGLPSDRFSFEGFLPSKASQRITQLEKLKNETQTLIFYEAPHRILECVKNMAEVFGEN RPVGFAREITKTFETIKKMTLKDLVSFIENDHNQEKGEIVLVVGGAAEKTDLEQEKLDEL LKRLLQDLSVKAASQLAADLTGIKKKVAYQRALELTQS >gi|333032504|gb|GL891922.1| GENE 17 12960 - 13361 238 133 aa, chain + ## HITS:1 COG:XF0554 KEGG:ns NR:ns ## COG: XF0554 COG0792 # Protein_GI_number: 15837156 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Xylella fastidiosa 9a5c # 1 133 1 119 121 75 34.0 3e-14 MLVAQQLGQWAEQTALKLLKEQNYEWVASNYHSRRGEVDLIVKRGNELIFVEVKARGQGN YGQACEMVTLSKQKKIIKTAMRFLQRYPSYQDFYCRFDVICFDFPQKIAKTVQQDFSKFH YDLQWIENAFTLD >gi|333032504|gb|GL891922.1| GENE 18 13442 - 14149 871 235 aa, chain + ## HITS:1 COG:PA4426 KEGG:ns NR:ns ## COG: PA4426 COG2823 # Protein_GI_number: 15599622 # Func_class: R General function prediction only # Function: Predicted periplasmic or secreted lipoprotein # Organism: Pseudomonas aeruginosa # 17 190 19 192 192 88 35.0 8e-18 MLKRIAVTALCVASLSGCASFISGGTGTAPVGTDSGVRSLGQVFIDSSIKRTANINLYKL DQRFKQSRINIESFHSTVLLTGQVPDPYLKQLAEDNVKAMSDVKAVHNYITVGNKVSYNT IMQDAGVTANTRALLMKAPVVSDSKVLVHTEDGVLYVMGRLNTAEINDLNNVLQNVGNVT KIVTLIDNIDLAPAPAASTASATTTPVINNVLAQPTVQTPVAIDPDQTDPASSAQ >gi|333032504|gb|GL891922.1| GENE 19 14153 - 15016 773 287 aa, chain + ## HITS:1 COG:DR0821_2 KEGG:ns NR:ns ## COG: DR0821_2 COG0657 # Protein_GI_number: 15805847 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 48 284 1 237 242 147 32.0 2e-35 MNLIEQLQSKIEQARTLYKEFRLYDLGSFALNRFTPKDGFEQVLNVRYGLKPRHRLDIYR STKRLAHRPLIVFVHGGAWQHGNKRDYLFIGEAFTKEGYDVAVINYQLAPKNIFPSYVDD LTQALNYLHQNQEKLEISTENIVLMGHSAGAFNVMSAVYHPKPNTIQCLGNIKAIFGLAG PYHFDYKGDPLAEDAFDQGISYKEVMPYYFVNQNHIKHYLLMAENDQLVKKENTFDLDQA LRQSGNHSHIAVIPKTGHITILASLSSFVSHYFRTKRTILHFLDEVF >gi|333032504|gb|GL891922.1| GENE 20 15039 - 15782 640 247 aa, chain - ## HITS:1 COG:MA1439 KEGG:ns NR:ns ## COG: MA1439 COG2816 # Protein_GI_number: 20090298 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Methanosarcina acetivorans str.C2A # 16 240 52 274 285 184 45.0 1e-46 MSELSLAYIFHHQQLLVDQNLQLPKVEKLASDLLFTHDEQVIARDLLSEEAIPEGLQLVP IRQLISNWSKEQFLQASRAVQLLEWRRNHKFCSHCGHATEVHPTEYAMVCPSCRYHQYPR VNPCIITIITKGDDEILLAKSIHNKTNMYGLIAGFVEVGETLEEAVQREALEEVGLKLKN IQYMSSQPWPFPSNLMIAFRAEYESGEISLQEDEIADAQFFKFDQLPEIPFKGSIAHAMI TQITQAK >gi|333032504|gb|GL891922.1| GENE 21 15782 - 17425 1584 547 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01093 NR:ns ## KEGG: ACICU_01093 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 547 1 547 547 935 100.0 0 MSEHNSIQFDPTALLIIKNEIDNSIKLVEGAVSTLIEEQALPFGIDDALEQFKQCTQVLR LIDIPYLAKITQYSTELMQKIMANPERINTDDVVALSEGTTMVKRYIEFICLREVEVPQF LLDTLNNLEKALNKPLTSSGQQIASKLSTASLELPLPEVLINERTQFIHQLYKLSLHQFL NKTENARDFQAFKLIGGYLVSMAQGQPSQQYWQLVNSAFSHIDELVLNDARLRVFINLEN AISLFLASPEGFEANLTALADILSIVIGQEDQLAQQIRSQLNIGHEFLTDTQLKALSQHL YGPDFDTMQTVSQLILSEMNKVRNDIEYNYQNMSPEKAQQLQSNLMQLAHTFKLLNLNEA ASELSQQASSLSQINILSNENYAQQLMKSILSAMNAIGILVRHYSSNRLQIRVNNTNISL DRLDEAHQTLLNETKNLIDFVCQSLTLYANDQTQNIEAIAGSLKELAGAAEFLGSTVQQN ALLETAKFVQQQIDQNQPFNHDQIHCIFNVLAGLDMLVDNLKNKQPVLQSMFDVALLSSQ QLQKKAA >gi|333032504|gb|GL891922.1| GENE 22 17560 - 18939 1573 459 aa, chain - ## HITS:1 COG:ECs0211 KEGG:ns NR:ns ## COG: ECs0211 COG0847 # Protein_GI_number: 15829465 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Escherichia coli O157:H7 # 232 457 7 241 243 218 47.0 2e-56 MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCP PDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHA GHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDET VTLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTET TGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYA EIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQK NSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTK ARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK >gi|333032504|gb|GL891922.1| GENE 23 19172 - 22378 3729 1068 aa, chain + ## HITS:1 COG:PA1812 KEGG:ns NR:ns ## COG: PA1812 COG0741 # Protein_GI_number: 15597009 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Pseudomonas aeruginosa # 86 360 73 348 534 257 47.0 8e-68 MYKPTTFVWQPSAASLFKITVLSSALAALGITTGCSSTPQSAKTSKTKQVSGAGYLDASS LDSLEDLLSATDMRAVEGDRLLILKHGDVWKRMAVGFKMDLNHWDPRIEAQRSWFISRQP YLDRLSARASRYLYHTVKEAERRGLPTELALLPVIESSYDPAATSSAAAAGLWQFIPSTG RIYGLQQTGMYDGRRDVVESTRAAYEFLGSLYNQFGSWELALAAYNAGPGRIQQAINRNQ AAGLPTDYWSLKLPQETMNYVPRFLAVAQIIKNPRAYGVSLPPIANRPHFREVTLSAPLS LNEIASVTGLSRAELYALNPGYRGETVDPASPMRILIPADISPSVDNKLKGMKAGGSSGW WASVTSPSKPTTTTSTSVTVRTTPSTPAQPVRPSTPAKTSSSSVTVKTATPRGSDALAAF AASADVPSAPRIPVAVTPAANIKPVRTEPPISATEREKILAAVRAEGEKETVDQALEPQA TQAEKDQVVAELKALAPQGTEIVDPYDGKIKLTAIQTSQSVAEQQGKEVSKGFAYPKTLA EDATLANSEDAQRNKDKPYIKTDTDVVVVQPKGKRSTYTVQPGDTLAVIAMKNGVNWRDV AKWNQIDPEKTLFVGTSLYLYDAKPQEVETTAKSAAKPDVYVVQANDSLTGVANQFNLSV KQLAEYNDLSVTDGLFVGQKLQLKEPKGNRAAKVEPKAIQASTRRIATKSYTVKRGEYLK LIADRYALSNQELADLTPGLSAGSNLIVGQKINVPAKEITVDDSKASGKYEKLAAGPSYK TESYKVQRGDTLSSIATKSKISLAELAELNNLKANSHVQLGQTLKVPAGASVPDQYVVQS GDSLNAIAAKYNLQTSYLADLNGLSRTAGLRAGQRLKLTGEVETTSKVSAKNTKEETPET YTVKSGDSLGNIANRYHLQLDYLAALNGLSRNSNVRVGQRLKLTGDLPTVETAKTDTAKS SPKAVVAGKNTEKYTVKAGESLNAIASRAGISVRELAEMNALKANANLQRGQNIVIPKTV VEYKVKRGDTLIGLASKYGLETTLLAELNNLTPSTQLRIGDIIKVPNL >gi|333032504|gb|GL891922.1| GENE 24 22394 - 24229 1321 611 aa, chain + ## HITS:1 COG:PA1810 KEGG:ns NR:ns ## COG: PA1810 COG4166 # Protein_GI_number: 15597007 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 37 601 36 597 615 471 42.0 1e-132 MQKLYSQLSLLVGLSVFSQVIFSAQQTTPYIAIHSKPKYLAMASMPYANPNAPKGGVLSQ AAQGTFDNLNSMNGKGNATEGVNYLFDTLMTQSLDEVGVLYPLLAEKVSYDPIKTQSVTF YLNPKARFSNGLPVTAEDVKFSFDTYQTKSNFGLQMYLADLAKTEVINPHQVKFTFKSSH NPKMPFVVASLPIYSKVDWQKRDFTRISLQSIIGSGPYVVEKIDAGRSISYKRNPNYWAK DLPINKGRYNFDHLKYVYYRNWDIAFEGFKSGQYTLHEETNPKKWVTDYHFPAVKAGLIT QYKFRHHNPIATESYVFNTRRKPFNDIRFRQALTYAYDFEWQNKALFYGQYQRLQSYFEN SDLAATGRPSNNEMAILKPLLPKLSPIMQKAVLADWKYPASDASGFNRQNLLLARQLLIE AGYKIKEGQLYTPEGKPVQIEFLIQQDGKQRTLMPFVRNLKKLGININLRQVDAPQYLER TRRYDFDMTTMNLPQSLNPGNEQAQFWGSAAAVQNGNYNYAGIRNPVIDEVISKLVTAKD REQQITYTHVLDRLLRAGYYQIPTYGKGDYWYAYWNMYQQPKVKPVLSAGIEYWWSNANQ AKKVAQYLHQQ >gi|333032504|gb|GL891922.1| GENE 25 24292 - 25311 878 339 aa, chain + ## HITS:1 COG:PA1809 KEGG:ns NR:ns ## COG: PA1809 COG4174 # Protein_GI_number: 15597006 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Pseudomonas aeruginosa # 1 334 12 357 360 381 58.0 1e-105 MIPTLFIILLINFVVVQIAPGGPVEQAIHEVESGLGAGRILGTEMYYQGAKGLSPEMVEQ IKAQYRFDHPPVERFLLMLKGYLTLDFGQSFFKDKSVVELLWEKMPVSISLGLWSTLLIY LISIPLGIKKAKQQGTWFDRSTSLLLVVGYAVPSFVFGILLIVFFAGGSYFQWFPLQNLV SDNFYQLSWFGKITDYLWHMTLPLITMVLGGFASLTYLTKYSFLEELNKPYVLAAYAKGL NSQQVLYKHVFRNAILVVLAGLPEALAGIFFVGNLFIEIIFHLDGVGLLGFEAIVQRDYP VIFGVLFFFTLFSLLLRLICDVLYQWIDPRIHFDAQGGK >gi|333032504|gb|GL891922.1| GENE 26 25311 - 26321 828 336 aa, chain + ## HITS:1 COG:PA1808 KEGG:ns NR:ns ## COG: PA1808 COG4239 # Protein_GI_number: 15597005 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Pseudomonas aeruginosa # 1 336 3 339 339 405 61.0 1e-113 MSFIVRSRLQKFRQHKLGWASFVLFSLILMMSLAAELIANDKPLLVKYEDAYYLPVFKTY PETTFGGVFETEADYKDPAVQELINHKGWAIWPLIRFSYQTPNLDLAVPVPSPPSKQNWL GTDDQGRDVLARILYGLRVSLLFGLALTGCAALLGIFVGAIQGYYGGWVDLLGQRLVEVW NGLPMLFMVMILVSMFTPNVYWLFFIMLFFSWTVLVGIVRAEFLKARQLDYVRAAQALGV TDRAIIFKHILPNAISSSLSQLPFILTTNIIALTALDFLGYGLPPDAASLGELLLQGKNN LDAPWLALSGFFSLAFVLSLLIYIGEAARDAFDPRK >gi|333032504|gb|GL891922.1| GENE 27 26299 - 27888 707 529 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 15 527 8 522 563 276 32 1e-73 MHLTQENNLNVDAKLLNIENLSISTQDQPLLEGLNLHLQARDTLAIVGESGSGKTISCLA MMGLLPEKLKTSGRIIIDSKNILEIDEKTQTHIRGRQIAMIFQEPSTTLNPLHRVEKIVG ENFILQGGSKAKAQQQVIQLLKDVGIANPEYILKRYPHELSGGQKQRVMIAAALALQPKI LIADEPTTALDVILQTQILELLKSLQSKYGMALILISHDLNLVRRYADELIVLHKGQVVE QGKLQQIFEHPTSVYTQQLLDHDLGFAEQHSTSHKILSVQQLNVKYPIRRGFFNRIQGYT NAVENVNFELNQGEALGVVGESGSGKSSLALALVRLIKSEGQINFLGQDINRLEQKALRK IRSDLQIVFQDPFGSLNPRMTVGQIIAEGLKVKAIADKEIKQQVESALIKVELAEGFQHR YPHELSGGQRQRVALARALVVRPKLLILDEPTSALDRTTQKAMIQLLRRLQQTEHLSYIF ISHDLNVVKALCHKVMVLRHAKVVEYQPTEQLFNTPKTEYTKQLIAASC >gi|333032504|gb|GL891922.1| GENE 28 28074 - 29318 1495 414 aa, chain + ## HITS:1 COG:DR2333 KEGG:ns NR:ns ## COG: DR2333 COG1902 # Protein_GI_number: 15807324 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Deinococcus radiodurans # 4 396 3 389 403 340 46.0 2e-93 MSQIAQPITIRNTTFKNRIIKGAMSEALANYEGQPNELHLGLYSAWAKGGLGCAITGNVM VNVEAKNEPGVVVIETERDLERLKEWAAVGKQYGMVQLIQLSHPGRQCPKGLNKETVAPS AVPFSPALATMFGTPRALTHEEILDIIKRFATAARICEKAGFEGVQLHGAHGYLISQFLS SLTNKRTDQWGGSIENRTRFLLEVYKAVREATSDNFIISVKLNSADFQRGGISEEDVISV FKAVDEAGIDLIEISGGTYEAPAMAGAKADKRKASTIAREAYFLDFAEKIRQHVKCKLMV TGGFRTVEGMNAALASGACDFIGIARPLAVETDLTDRLIAGQDVRYAVKPIKTGLPFVDK MAIMEIIWYAAQFKAIGQGKKPNPKLSPLIVFLNYAKGNIKAVVQGRVNSRKSA >gi|333032504|gb|GL891922.1| GENE 29 29377 - 31491 2269 704 aa, chain - ## HITS:1 COG:PA4837 KEGG:ns NR:ns ## COG: PA4837 COG1629 # Protein_GI_number: 15600030 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 8 704 7 708 708 509 38.0 1e-144 MDLKLRLLSLSIAQLCCIPAAFADTNNSSTTLATIKIKAQQASDQTYKVDSSSSATRSEI ALQDTPQSVSMVTQKVIEDIGATRLVEALDLAGGVTRANNFGGQGLTGFNMRGFTSGEFY RNGFPINRGYPNAPDSNTIERVDVLRGPSSSLYGRGDPGGTFNLISKTPKSEQQTTLGAQ LSSEGLYRTTVDTTGTVPDAENIGYRLNVIAEGGDSYRDHVESKRYGIAPVIQWQATDAT KVTFEADILRNQHPLDRGHTRYPTQKSFNSSPETYLWETGKYYNRLYNDNNMTQLRVEHD LGNDWKLNAGVQYLNGKLHGYAVEANGIQNDGETLGRNYNYRELKWQDTDAQINLTGNFQ LLGLAHTLVTGLEYENYDYKSYIIRSSGDIGSYPINIYNPVLGQPLPELNRVTTHDRENL KTTALFVQDQIGLNERLSALLGLRFEHYEHDYKNLLPNTTNWNTSHDAFIPRLGLVYKAS DDLSLYGNAAKSFKPNTGASRNGEGFDPEEGTAYELGFKWQALDNMLSIDSAIFYANKEN VLTLDPVDSAYKVAAGEVRSRGIELNIAGQITPAWKIIGGYAYTDAEVTKDNTLQKGTAL ANIPKNSFNLLNIYEFQDGPLQGLGLGINQKYIDKRAGQTANSTYTMKGYAVTDLVSYYQ ATPKLRLNLDVKNIFDKVYDESAFNLYAYPGESRTVQLGMSYTF >gi|333032504|gb|GL891922.1| GENE 30 31769 - 32431 566 220 aa, chain - ## HITS:1 COG:VC1006 KEGG:ns NR:ns ## COG: VC1006 COG0847 # Protein_GI_number: 15641021 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Vibrio cholerae # 5 207 20 220 243 228 55.0 6e-60 MEKSVTQENSVPVIGQRFRGFLPVVVDVETAGFNAQTDALLEIACIPIVYDAQGQFVPGP AFHAHINPFEGANLDRRSLDFIGIDPFNPMRIAMAEDERTALRRIFKSVNEVRKQQHCTH AVLVGHNAHFDLGFLQAAIARSGTKNQNPFHSFSVMDTVTLSAVMFGQTVLAKACIQAGI EFDGKEAHSALYDTQKTAELFCYILNKLSPYLLDSLVAAS >gi|333032504|gb|GL891922.1| GENE 31 32416 - 33450 1022 344 aa, chain - ## HITS:1 COG:PA3527 KEGG:ns NR:ns ## COG: PA3527 COG0418 # Protein_GI_number: 15598723 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase # Organism: Pseudomonas aeruginosa # 2 342 3 342 348 439 63.0 1e-123 MNSITLLQPDDWHAHLRDGLALKRTVPDLAKQFARAICMPNLVPPVKTVEEALAYRERIL AHVPEGNNFDPRMVLYFTDHTSPDEVRKIKESEHVNAIKLYPAGATTNSDNGVSDIRKVY AVIEQLEEHQVPLLLHGEVTHNHVDIFDREKRFLDEVLSPLLKQFPKLKVVLEHITTSDA AHFVLEQDRNVAATITPQHLLFNRNDMLVGGIKPHFYCLPILKRQTHQTTLLEVATSGNP KFFLGTDSAPHAQNAKENACGCAGCYSAPNAIELYAQAFDQVGKLERLEGFASHFGADFY GLPRNTSTITLVKEDNLVPESFDYLDNQKIIPLHAGKTLQWRKV >gi|333032504|gb|GL891922.1| GENE 32 33600 - 34862 769 420 aa, chain + ## HITS:1 COG:slr1047_3 KEGG:ns NR:ns ## COG: slr1047_3 COG2199 # Protein_GI_number: 16329623 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Synechocystis # 244 414 8 179 184 154 46.0 3e-37 MANRGNVHQLLKSKEEIEYLVTLHTHRYANMPLPKQLEKKFWCLNLDRTRQNISKFLASG VLTYLIFILLALPTDYLVIGVPYITLDFIHCLLSAMNIALALLLFWVFAKFTKLSEHFYL AACGIVFLTIIINAMLLLSVGNMALKNQSMLLLSFLYMLGFILSGIKPLHMLCVGLLAAF LVFAFLILLDVNCDYIALGRALFGSCILGFSISSMLISRERSLFLNNQLAEINEQILRIE ASELLHLSQQDALTQISNRRTFDEMFDFFYYRANQEKRPLAVLFIDIDFFKNYNDFYGHQ MGDKVISSIAAAIKNSIRHVDFVARYGGEEFVVLLPETPAQGAYSVAANIYKAIERQAIP HAASLVSKYVTISLGFTVYTGGLKMGQDRLIHAADQALYRAKQLGRNQIYYQPLQVAEIA >gi|333032504|gb|GL891922.1| GENE 33 34921 - 36279 1761 452 aa, chain - ## HITS:1 COG:NMA0303 KEGG:ns NR:ns ## COG: NMA0303 COG0137 # Protein_GI_number: 15793316 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Neisseria meningitidis Z2491 # 6 451 1 447 447 798 86.0 0 MLGLAMTDNATILQHVPVGKKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDD YDAIPKKAEQYGAVKARLIDCRLQLALEGIAAIQCGAFHISTGGVPYFNTTPLGRAVTGT MLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIDELGGRAEM SQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKIVDPIMGVAFWKEEVEI KPEEVTVRFEEGVPVALNGQRFDNPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIY EAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDSQALMLRETAQRWV AKAITGEVTLELRRGNDYTIMNTESPNLTYEAERLTMEKGDSMFTPMDRIGQLTMRNLDI TDTRAKLGIYTDAGLLSIGQGSAVPQLDNKKK >gi|333032504|gb|GL891922.1| GENE 34 36545 - 38575 2260 676 aa, chain + ## HITS:1 COG:PA4814_1 KEGG:ns NR:ns ## COG: PA4814_1 COG1902 # Protein_GI_number: 15600007 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Pseudomonas aeruginosa # 4 355 13 364 364 489 64.0 1e-138 MTSYANLLKPLHLGFTTIKNRVVMGSMHTGLEDRFFNYPKLAAYFEERAKGGVGLIVTGG ISPNRQGWLAPAGGTMNSLFDIPQHRLVTHAVHKHGSKILMQILHAGRYGYQPFVVSSSA IKSPISPFKPRQLSEKNILSTIEDYAQCADIAKKAGYDGVEIMGSEGYLINQFLSRHVNQ RKDRWGGEIENRMRFPVEIVKAIRAKVGEKFIICFRLSLLDLVHDGNTMQEVVTVAKALE KAGVTLLNTGIGWHEARVPTIVTSVPRAAFVDYTAHVKQYISIPVIASNRINMPETAEEI LATGKADMIQMARPLLADAFWVNKTATNRVDEINTCIACNQACLDHAFKNKRVSCLVNPR AGHETELVYLKTKQPKRIAVVGGGVAGMSAATVAASRGHAVTLFEANADVGGQFNFAKVV PGKEEFHETIRYFKVQLQKTGVDVRLNTRVNREQLEREGFDEVIVATGVVPRALKIEGSN SPQVLSYAQVLEGAEVGRKVAVIGAGGIGFDVSEFLLKPPHQPQPQPLAEWQREWGVDPD PNYISEGGMQPPVVEPAIREIYLLQRKTTPLGIGLGKTSGWVHRAQLKKHGVRMLRGVQY KAVTDEGLWIEHNGQDQLLRVDTVVVCAGQESVKDLMPKEGESTIANYHIIGGAKLAAEL DAKRAIKEGAELAAQL >gi|333032504|gb|GL891922.1| GENE 35 38915 - 40006 952 363 aa, chain - ## HITS:1 COG:RSc0644 KEGG:ns NR:ns ## COG: RSc0644 COG0501 # Protein_GI_number: 17545363 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Ralstonia solanacearum # 117 356 116 349 358 133 32.0 6e-31 MSQAVDIIFYDGIVSKPYRAQISAQSKTEVLIRYGEQLEQQRHYQYTDMKLIGALGQLHP VIELDDDARIEFHGALPEWFNYSTKKIQHSIWKFERSPSLIFFSLIFVITFGISLVKWGV PATSHYVAFKLPENSLKKLGDEAENYVLNNWTAPSQLAQTQKDQITKQYLNTVAENKPAK LVFRKGNRLGANAVALPNNTIIITDELIQIAHNNQEILGVLAHEQGHLVYRHSLQQGLTS LGLSVLYIAMTGDNSDLFTSLPAAMLGANYSRKFESEADLYALQLMDRKNIEVSHFANFL QRLNDKTEEDLNKASQSTSPTSQKESSDNKLSIAVVDALSSHPATEERIRMVHDFEKKQH ANY >gi|333032504|gb|GL891922.1| GENE 36 40027 - 41115 907 362 aa, chain - ## HITS:1 COG:RSc0643 KEGG:ns NR:ns ## COG: RSc0643 COG4269 # Protein_GI_number: 17545362 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 33 362 25 358 358 179 35.0 5e-45 MQDQALPSFPQDLNEDQSITRPPISYSGIHHFKFHGNASEYFGIWIVNILLTIITLSLYA PWAKVRRLRYFYGNTEFFERRFDFTGIPTKILIGRLIALGIYVAFSISSQYSMIATVVGI VVLYMAVPWLIRATLRFTARNSKYGNARFYFGGTIKESYKIFLLSILVYIFTLGIFTPVA IWLYKKYYLNHLYAGQLNFKLNATWTAYMAAVYVPIFIALGIIAIFSIIYFSILGTLSGF SSNSVIFGIFMMYAIIGLFIYPLIAARLFITTWNNTTVGNSQFKTDCNQWRFAWIVASNW VVKILTLGLMSAWAAVRIHKYQVESMSLILLDDPDKMMNLAQQEQSALAEEISDIFDIDI SL >gi|333032504|gb|GL891922.1| GENE 37 41959 - 42834 1062 291 aa, chain + ## HITS:1 COG:DR1359 KEGG:ns NR:ns ## COG: DR1359 COG1464 # Protein_GI_number: 15806376 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Deinococcus radiodurans # 60 278 39 253 256 142 37.0 6e-34 MKKLFSVLFSASVLTLTACNKQPAQTENTAAKDKTESVRTIKLVSTGSDTDVWKYVATLP ETAQAGIKLEVTNLTDYVVLNTSVASGEQDVNAFQSFNYLAAYNASNKAKVAAVATTYLE PMGIYANKVKTVDEFPQGATIAIPNDTANEARALTLLQSAKLIKLKPGFDPVKGTVNDIA ENPKNLQLKPIQMTTAVRVKNDVDAIVLGNTLALEGGLNVMKDAIFREPIDQSTKLYVNL LGVAEANKNDPIYTKLGELYHLPKVQKFVNEKFGGTKVEVNKPVSEFADIK >gi|333032504|gb|GL891922.1| GENE 38 42959 - 43240 228 93 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002472 NR:ns ## KEGG: ABBFA_002472 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 6 93 1 88 88 164 100.0 1e-39 MENHEMKISLLDVQQVFNDLLNHKISREDAEEWARKRMNALDNQDLIFDPPIKEELLWKA VIYLSGVGLKISPDTYMEDDIGIKEMFNTYWNQ >gi|333032504|gb|GL891922.1| GENE 39 43418 - 43597 60 59 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01112 NR:ns ## KEGG: ACICU_01112 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 59 1 59 59 111 100.0 8e-24 MLATLPVGFSRPFRKALKEQSFSDEPSCPLYGGTGGGHLRVCWVFSASLLTPFRSATLI >gi|333032504|gb|GL891922.1| GENE 40 44012 - 44584 284 190 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01115 NR:ns ## KEGG: ACICU_01115 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 190 1 190 190 357 100.0 1e-97 MPNLETSSKKLHVIRTAINLFTTYGFHTTGVDLIVKKSEIPKATLYNYFHSKEGLIEICI AFQKSLLKEEVLAIIYSNRYCTPTVKLKEIVVLHVNSNSLYHLLLKAFFEIKGTYPQAYR MAIEYRKWLIREFFDLIFSLETRALKPDADMVLNLIDGLMFGFLSTNSLSERDEVLERFF YASTLERKTN Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:18:28 2011 Seq name: gi|333032503|gb|GL891923.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld308, whole genome shotgun sequence Length of sequence - 848 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 132 - 638 266 ## AB57_3195 hypothetical protein Predicted protein(s) >gi|333032503|gb|GL891923.1| GENE 1 132 - 638 266 168 aa, chain + ## HITS:1 COG:no KEGG:AB57_3195 NR:ns ## KEGG: AB57_3195 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 168 1 168 168 337 99.0 9e-92 MDNEYAKFFFNRKVDVYQLECIELSHPSFMNTYRIVRNDDRGVYVQHKEGSGQVYYEFLP ASIQRSGMLGDLDQTLTVSISGLGDVMPDEFERVIEGQYPDVKPTVNYRIYSSDNLNSPM FYLLGLQLSSVAMNHKAVTFKAESPRLNTAKTGDIFSLDRFSGLKGAI Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:19:20 2011 Seq name: gi|333032502|gb|GL891924.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld311, whole genome shotgun sequence Length of sequence - 170977 bp Number of predicted genes - 179, with homology - 179 Number of transcription units - 96, operones - 41 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 462 - 788 300 ## ACICU_02429 hypothetical protein + Term 838 - 874 1.3 2 2 Tu 1 . - CDS 785 - 1255 309 ## ACICU_02430 hypothetical protein - Prom 1333 - 1392 11.4 - Term 1368 - 1398 0.3 3 3 Tu 1 . - CDS 1419 - 1781 593 ## COG3111 Uncharacterized conserved protein - Prom 1832 - 1891 6.6 - Term 1934 - 1963 1.4 4 4 Op 1 7/0.074 - CDS 2068 - 2712 457 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 5 4 Op 2 . - CDS 2709 - 3308 433 ## COG0500 SAM-dependent methyltransferases 6 4 Op 3 . - CDS 3283 - 4077 660 ## COG2120 Uncharacterized proteins, LmbE homologs 7 4 Op 4 . - CDS 4065 - 5054 692 ## ABAYE1299 acyl-CoA dehydrogenase-related protein - Prom 5143 - 5202 9.1 + Prom 5083 - 5142 11.9 8 5 Tu 1 . + CDS 5338 - 5571 337 ## ABBFA_001210 hypothetical protein + Term 5658 - 5702 9.0 - Term 5645 - 5689 9.0 9 6 Tu 1 . - CDS 5719 - 7116 1368 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 7152 - 7211 3.9 - Term 7173 - 7206 3.1 10 7 Op 1 . - CDS 7219 - 8787 1783 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 8836 - 8895 2.1 - Term 8843 - 8875 0.8 11 7 Op 2 . - CDS 8898 - 10280 1334 ## COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase - Prom 10344 - 10403 6.5 + Prom 10286 - 10345 3.5 12 8 Tu 1 . + CDS 10378 - 11295 710 ## COG0583 Transcriptional regulator + Term 11465 - 11494 -0.2 - TRNA 11353 - 11426 62.6 # Trp CCA 0 0 - TRNA 11492 - 11576 77.5 # Leu TAG 0 0 - TRNA 11604 - 11677 62.6 # Trp CCA 0 0 - TRNA 11732 - 11816 77.5 # Leu TAG 0 0 13 9 Op 1 . - CDS 11922 - 12725 449 ## COG0515 Serine/threonine protein kinase 14 9 Op 2 . - CDS 12712 - 14220 1538 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily + Prom 14311 - 14370 5.6 15 10 Tu 1 . + CDS 14399 - 15280 934 ## COG2607 Predicted ATPase (AAA+ superfamily) + Prom 15299 - 15358 3.1 16 11 Tu 1 . + CDS 15384 - 16487 828 ## ACICU_02444 hypothetical protein + Term 16621 - 16655 0.7 - Term 16319 - 16352 -0.8 17 12 Tu 1 . - CDS 16490 - 17509 652 ## PROTEIN SUPPORTED gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase - Prom 17534 - 17593 5.3 + Prom 17526 - 17585 6.6 18 13 Op 1 9/0.074 + CDS 17646 - 17861 356 ## PROTEIN SUPPORTED gi|50084512|ref|YP_046022.1| 30S ribosomal protein S21 19 13 Op 2 . + CDS 17888 - 18334 272 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 - Term 18301 - 18336 0.1 20 14 Tu 1 . - CDS 18425 - 19861 1244 ## COG4783 Putative Zn-dependent protease, contains TPR repeats - Prom 19881 - 19940 5.1 21 15 Op 1 . - CDS 19999 - 20964 973 ## COG1052 Lactate dehydrogenase and related dehydrogenases 22 15 Op 2 . - CDS 20976 - 21626 509 ## ABSDF1279 hypothetical protein - Prom 21649 - 21708 4.3 23 16 Tu 1 . - CDS 21727 - 23577 1756 ## ABBFA_001190 hypothetical protein - Prom 23607 - 23666 3.8 - Term 23646 - 23686 9.1 24 17 Op 1 . - CDS 23695 - 25236 1579 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 25 17 Op 2 . - CDS 25262 - 25849 348 ## ACICU_02453 hypothetical protein 26 17 Op 3 . - CDS 25856 - 26860 1178 ## COG0167 Dihydroorotate dehydrogenase - Prom 26887 - 26946 2.9 - Term 26908 - 26939 1.5 27 18 Op 1 . - CDS 26950 - 27423 547 ## ABBFA_001186 hypothetical protein 28 18 Op 2 . - CDS 27429 - 28553 873 ## ACICU_02456 general secretion pathway protein L 29 18 Op 3 . - CDS 28591 - 29046 493 ## COG2062 Phosphohistidine phosphatase SixA 30 18 Op 4 . - CDS 29103 - 30176 1409 ## COG0240 Glycerol-3-phosphate dehydrogenase 31 18 Op 5 . - CDS 30211 - 30786 588 ## COG0778 Nitroreductase - Prom 30995 - 31054 8.1 + Prom 30747 - 30806 3.9 32 19 Tu 1 . + CDS 31017 - 31370 388 ## ABSDF1269 hypothetical protein + Term 31381 - 31414 3.1 - Term 31359 - 31408 11.1 33 20 Tu 1 . - CDS 31409 - 32560 1342 ## COG0513 Superfamily II DNA and RNA helicases - Prom 32595 - 32654 6.5 - Term 32601 - 32642 7.2 34 21 Tu 1 . - CDS 32664 - 32876 344 ## COG1278 Cold shock proteins + Prom 33172 - 33231 10.4 35 22 Op 1 . + CDS 33251 - 33496 178 ## ABAYE1218 hypothetical protein + Prom 33536 - 33595 3.6 36 22 Op 2 . + CDS 33630 - 34496 1113 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) + Term 34512 - 34547 3.1 + Prom 34499 - 34558 5.0 37 23 Op 1 . + CDS 34608 - 34973 366 ## COG2363 Uncharacterized small membrane protein 38 23 Op 2 . + CDS 34987 - 35184 297 ## ABBFA_001175 thiamine biosynthesis protein ThiS 39 23 Op 3 . + CDS 35198 - 35983 1097 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis + Term 35995 - 36036 4.3 40 24 Op 1 . - CDS 36122 - 36745 502 ## COG4339 Uncharacterized protein conserved in bacteria 41 24 Op 2 . - CDS 36765 - 37538 895 ## COG3022 Uncharacterized protein conserved in bacteria - Prom 37564 - 37623 5.0 + Prom 37580 - 37639 4.8 42 25 Tu 1 . + CDS 37666 - 38298 738 ## COG2945 Predicted hydrolase of the alpha/beta superfamily + Term 38307 - 38349 8.4 + Prom 38405 - 38464 7.6 43 26 Tu 1 . + CDS 38495 - 39451 794 ## COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III + Term 39485 - 39522 6.6 - Term 39472 - 39510 6.8 44 27 Tu 1 . - CDS 39523 - 40983 1478 ## COG2195 Di- and tripeptidases - Prom 41003 - 41062 7.3 - Term 41087 - 41124 6.1 45 28 Tu 1 . - CDS 41154 - 41537 416 ## ABAYE1208 hypothetical protein - Prom 41566 - 41625 3.2 - Term 41578 - 41619 6.0 46 29 Op 1 1/0.185 - CDS 41665 - 43935 2511 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Term 43964 - 44001 2.2 47 29 Op 2 . - CDS 44020 - 45129 1425 ## COG0077 Prephenate dehydratase - Prom 45161 - 45220 4.8 + Prom 45264 - 45323 7.0 48 30 Tu 1 . + CDS 45381 - 46259 703 ## COG2819 Predicted hydrolase of the alpha/beta superfamily + Term 46260 - 46308 8.5 - Term 46248 - 46294 7.3 49 31 Tu 1 . - CDS 46303 - 47448 1529 ## COG1960 Acyl-CoA dehydrogenases - Prom 47540 - 47599 3.9 - Term 47561 - 47588 0.1 50 32 Tu 1 . - CDS 47612 - 48970 1332 ## COG1301 Na+/H+-dicarboxylate symporters + Prom 49326 - 49385 4.8 51 33 Tu 1 . + CDS 49470 - 50483 847 ## COG0547 Anthranilate phosphoribosyltransferase + Term 50523 - 50575 10.5 - Term 50482 - 50537 3.4 52 34 Op 1 . - CDS 50685 - 50957 451 ## COG3139 Uncharacterized protein conserved in bacteria 53 34 Op 2 . - CDS 50954 - 51862 884 ## COG0061 Predicted sugar kinase + Prom 51897 - 51956 8.8 54 35 Op 1 . + CDS 52048 - 54444 2498 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 55 35 Op 2 . + CDS 54465 - 55016 598 ## ABBFA_001159 hypothetical protein - Term 54987 - 55026 3.2 56 36 Tu 1 . - CDS 55038 - 55937 843 ## COG0352 Thiamine monophosphate synthase - Prom 56045 - 56104 5.6 + Prom 55942 - 56001 7.1 57 37 Tu 1 . + CDS 56074 - 56244 229 ## ABBFA_001157 hypothetical protein + Term 56291 - 56326 4.4 - Term 56212 - 56249 -0.9 58 38 Op 1 40/0.000 - CDS 56310 - 57620 1164 ## COG0642 Signal transduction histidine kinase 59 38 Op 2 1/0.185 - CDS 57665 - 58327 680 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 58348 - 58407 7.4 - Term 58373 - 58405 1.5 60 39 Op 1 . - CDS 58435 - 58794 527 ## COG3111 Uncharacterized conserved protein 61 39 Op 2 . - CDS 58876 - 60633 1817 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB - Prom 60695 - 60754 7.0 62 40 Tu 1 . + CDS 60921 - 62189 1042 ## COG3174 Predicted membrane protein + Term 62334 - 62389 -0.9 - Term 61958 - 61985 -0.8 63 41 Tu 1 . - CDS 62199 - 62930 691 ## COG1720 Uncharacterized conserved protein - Prom 62956 - 63015 3.0 + Prom 62941 - 63000 7.8 64 42 Tu 1 . + CDS 63032 - 63811 932 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 63821 - 63872 10.8 - Term 63820 - 63849 0.4 65 43 Tu 1 . - CDS 63866 - 64735 889 ## COG0384 Predicted epimerase, PhzC/PhzF homolog - Prom 64849 - 64908 7.8 + Prom 64744 - 64803 7.7 66 44 Op 1 . + CDS 64970 - 66433 1175 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 67 44 Op 2 2/0.148 + CDS 66490 - 67860 1214 ## COG0826 Collagenase and related proteases 68 44 Op 3 . + CDS 67863 - 68126 143 ## COG1145 Ferredoxin + Prom 68183 - 68242 5.0 69 45 Tu 1 . + CDS 68363 - 68692 412 ## COG2076 Membrane transporters of cations and cationic drugs - Term 68698 - 68753 -0.9 70 46 Op 1 6/0.074 - CDS 68764 - 69540 607 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 71 46 Op 2 12/0.000 - CDS 69550 - 70263 603 ## COG4160 ABC-type arginine/histidine transport system, permease component 72 46 Op 3 12/0.000 - CDS 70260 - 70949 570 ## COG4215 ABC-type arginine transport system, permease component - Prom 70973 - 71032 4.0 - Term 70997 - 71028 2.1 73 46 Op 4 3/0.074 - CDS 71041 - 71826 955 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 71873 - 71932 2.6 74 47 Op 1 . - CDS 72001 - 73032 922 ## COG0583 Transcriptional regulator 75 47 Op 2 . - CDS 73011 - 73184 134 ## ACICU_02503 hypothetical protein - Prom 73271 - 73330 3.7 + Prom 73053 - 73112 5.8 76 48 Op 1 27/0.000 + CDS 73230 - 74450 1506 ## COG0845 Membrane-fusion protein 77 48 Op 2 9/0.074 + CDS 74457 - 77636 3501 ## COG0841 Cation/multidrug efflux pump 78 48 Op 3 . + CDS 77649 - 79097 477 ## PROTEIN SUPPORTED gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 + Term 79106 - 79131 -0.5 - Term 79094 - 79119 -0.5 79 49 Tu 1 . - CDS 79138 - 80391 1586 ## COG0112 Glycine/serine hydroxymethyltransferase - Prom 80531 - 80590 9.7 + Prom 80472 - 80531 8.7 80 50 Tu 1 . + CDS 80551 - 81378 666 ## ACICU_02508 putative cytoplasmic protein + Term 81405 - 81437 -1.0 - Term 81371 - 81423 11.5 81 51 Tu 1 . - CDS 81438 - 82667 1395 ## ACICU_02509 hypothetical protein - Prom 82747 - 82806 5.6 + Prom 82810 - 82869 4.4 82 52 Op 1 . + CDS 82917 - 83603 658 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases + Term 83691 - 83737 5.8 + Prom 83628 - 83687 5.4 83 52 Op 2 . + CDS 83751 - 84383 516 ## ABBFA_001132 hypothetical protein + Term 84505 - 84572 30.2 + TRNA 84483 - 84559 81.3 # Arg CCG 0 0 84 53 Tu 1 . - CDS 84634 - 84831 95 ## ABAYE1275 hypothetical protein - Prom 84855 - 84914 3.3 85 54 Op 1 . - CDS 84956 - 85510 466 ## COG3772 Phage-related lysozyme (muraminidase) 86 54 Op 2 . - CDS 85500 - 85718 280 ## AB57_2672 hypothetical protein 87 54 Op 3 . - CDS 85715 - 86002 268 ## AB57_2673 hypothetical protein - Prom 86053 - 86112 4.0 - Term 86089 - 86125 1.0 88 55 Tu 1 . - CDS 86147 - 86755 277 ## gi|332875207|ref|ZP_08443040.1| conserved domain protein - Prom 86786 - 86845 5.9 - Term 87163 - 87195 2.2 89 56 Op 1 . - CDS 87219 - 89720 1814 ## ABAYE1272 hypothetical protein 90 56 Op 2 . - CDS 89730 - 91406 1157 ## ABAYE1271 hypothetical protein 91 56 Op 3 . - CDS 91406 - 91714 313 ## ABAYE1270 hypothetical protein - Prom 91802 - 91861 5.4 + Prom 91683 - 91742 6.9 92 57 Tu 1 . + CDS 91859 - 92002 248 ## gi|332875211|ref|ZP_08443044.1| conserved domain protein + Term 92006 - 92052 11.2 - Term 92003 - 92032 2.1 93 58 Op 1 . - CDS 92038 - 94563 2404 ## ABAYE1268 phage related protein 94 58 Op 2 . - CDS 94567 - 97440 3030 ## ABAYE1266 phage-like protein 95 58 Op 3 . - CDS 97440 - 99482 1780 ## ABAYE1265 hypothetical protein 96 58 Op 4 . - CDS 99482 - 99877 540 ## ABAYE1264 hypothetical protein 97 58 Op 5 . - CDS 99889 - 100074 135 ## gi|332875216|ref|ZP_08443049.1| conserved domain protein 98 58 Op 6 . - CDS 100078 - 100530 452 ## ABAYE1263 phage related acetyltransferase 99 58 Op 7 . - CDS 100532 - 102610 1450 ## ABAYE1262 phage-like protein 100 58 Op 8 . - CDS 102610 - 103170 340 ## ABAYE1261 phage related protein 101 58 Op 9 . - CDS 103231 - 103629 485 ## ABBFA_002544 hypothetical protein - Term 103650 - 103692 7.1 102 59 Op 1 . - CDS 103700 - 104599 781 ## ABAYE1259 hypothetical protein 103 59 Op 2 . - CDS 104611 - 105234 611 ## ABAYE1258 hypothetical protein 104 59 Op 3 . - CDS 105227 - 105712 327 ## ABAYE1257 hypothetical protein 105 59 Op 4 . - CDS 105709 - 107352 1829 ## ABAYE1256 phage related protein 106 59 Op 5 . - CDS 107354 - 107584 367 ## ABAYE1255 hypothetical protein 107 59 Op 6 . - CDS 107584 - 107907 413 ## ABAYE1254 hypothetical protein 108 59 Op 7 . - CDS 107974 - 108153 201 ## gi|332875227|ref|ZP_08443060.1| hypothetical protein HMPREF0022_02693 109 60 Op 1 . - CDS 108255 - 108464 146 ## gi|332875228|ref|ZP_08443061.1| conserved domain protein 110 60 Op 2 . - CDS 108461 - 108847 225 ## ABAYE1251 hypothetical protein 111 60 Op 3 . - CDS 108849 - 109124 171 ## ABAYE2738 hypothetical protein 112 60 Op 4 . - CDS 109117 - 109485 259 ## gi|332875231|ref|ZP_08443064.1| hypothetical protein HMPREF0022_02697 113 60 Op 5 . - CDS 109482 - 109643 180 ## gi|332875232|ref|ZP_08443065.1| hypothetical protein HMPREF0022_02698 114 60 Op 6 . - CDS 109640 - 110050 426 ## ABAYE1244 hypothetical protein 115 60 Op 7 . - CDS 110062 - 110481 161 ## Psyc_0994 hypothetical protein - Term 110542 - 110575 -0.7 116 61 Op 1 . - CDS 110627 - 111367 719 ## COG1484 DNA replication protein 117 61 Op 2 . - CDS 111364 - 111777 175 ## ABAYE1239 hypothetical protein 118 61 Op 3 . - CDS 111755 - 112258 279 ## ABSDF1012 hypothetical protein 119 61 Op 4 . - CDS 112255 - 112722 179 ## gi|332875240|ref|ZP_08443072.1| conserved domain protein - Prom 112921 - 112980 2.1 120 62 Tu 1 . - CDS 113067 - 113285 168 ## gi|332875242|ref|ZP_08443074.1| putative regulatory protein cro - Prom 113309 - 113368 5.6 + Prom 113271 - 113330 3.6 121 63 Op 1 . + CDS 113361 - 114044 590 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 122 63 Op 2 . + CDS 114041 - 114682 336 ## gi|332875244|ref|ZP_08443076.1| hypothetical protein HMPREF0022_02709 + Term 114702 - 114737 3.7 + Prom 114702 - 114761 8.5 123 64 Op 1 . + CDS 114885 - 115076 134 ## AB57_3255 hypothetical protein 124 64 Op 2 . + CDS 115076 - 115441 221 ## ECIAI39_2683 hypothetical protein 125 64 Op 3 . + CDS 115453 - 116256 809 ## AB57_3257 hypothetical protein 126 64 Op 4 . + CDS 116253 - 116633 378 ## gi|332875248|ref|ZP_08443080.1| conserved domain protein 127 64 Op 5 . + CDS 116633 - 116815 187 ## ABAYE1232 hypothetical protein 128 64 Op 6 . + CDS 116832 - 117683 753 ## AB57_2735 hypothetical protein 129 64 Op 7 . + CDS 117686 - 118585 967 ## AB57_2736 hypothetical protein + Prom 118732 - 118791 3.4 130 65 Op 1 . + CDS 118844 - 119281 363 ## ABSDF1751 hypothetical protein 131 65 Op 2 . + CDS 119278 - 119487 210 ## AB57_2740 hypothetical protein 132 65 Op 3 . + CDS 119484 - 119675 68 ## AOLE_07395 hypothetical protein 133 65 Op 4 . + CDS 119677 - 119946 214 ## AB57_2743 hypothetical protein - Term 119685 - 119727 -0.5 134 66 Tu 1 . - CDS 119943 - 120929 701 ## COG0582 Integrase - Prom 121111 - 121170 8.0 + Prom 121103 - 121162 6.9 135 67 Op 1 45/0.000 + CDS 121227 - 122162 1570 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 136 67 Op 2 1/0.185 + CDS 122159 - 122932 710 ## COG0842 ABC-type multidrug transport system, permease component 137 67 Op 3 . + CDS 122929 - 123741 767 ## COG0780 Enzyme related to GTP cyclohydrolase I 138 67 Op 4 . + CDS 123765 - 124415 835 ## ABBFA_001127 hypothetical protein + Term 124433 - 124468 3.5 + Prom 124417 - 124476 6.5 139 68 Op 1 1/0.185 + CDS 124544 - 125686 1203 ## COG0772 Bacterial cell division membrane protein 140 68 Op 2 2/0.148 + CDS 125706 - 126707 1172 ## COG2951 Membrane-bound lytic murein transglycosylase B + Prom 126763 - 126822 5.8 141 69 Tu 1 . + CDS 126998 - 127615 678 ## COG0797 Lipoproteins + Term 127857 - 127904 1.2 142 70 Tu 1 . - CDS 127841 - 127990 60 ## gi|332875265|ref|ZP_08443097.1| hypothetical protein HMPREF0022_02730 - Prom 128114 - 128173 5.8 + Prom 127905 - 127964 5.7 143 71 Tu 1 . + CDS 128172 - 128624 437 ## COG4539 Predicted membrane protein + Term 128636 - 128670 2.1 - Term 128624 - 128658 4.6 144 72 Op 1 9/0.074 - CDS 128665 - 128982 237 ## COG4392 Predicted membrane protein 145 72 Op 2 2/0.148 - CDS 128984 - 129529 471 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) - Prom 129587 - 129646 4.6 146 73 Op 1 . - CDS 129794 - 130618 760 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 130642 - 130701 1.8 147 73 Op 2 . - CDS 130717 - 131202 381 ## ACICU_02523 hypothetical protein - Term 131216 - 131258 7.1 148 74 Op 1 38/0.000 - CDS 131268 - 132143 699 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 132175 - 132211 7.1 149 74 Op 2 . - CDS 132281 - 133084 1337 ## PROTEIN SUPPORTED gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 - Prom 133120 - 133179 4.4 + Prom 133155 - 133214 4.7 150 75 Tu 1 . + CDS 133243 - 134070 978 ## COG0024 Methionine aminopeptidase + Term 134091 - 134119 -0.1 + Prom 134072 - 134131 12.1 151 76 Tu 1 . + CDS 134275 - 135345 1142 ## COG3047 Outer membrane protein W + Term 135363 - 135405 9.0 + Prom 135679 - 135738 2.8 152 77 Tu 1 . + CDS 135758 - 137104 1347 ## COG2223 Nitrate/nitrite transporter + Term 137109 - 137161 6.3 + Prom 137193 - 137252 8.9 153 78 Op 1 . + CDS 137279 - 138493 1200 ## COG0477 Permeases of the major facilitator superfamily 154 78 Op 2 . + CDS 138483 - 138617 84 ## ACICU_02530 hypothetical protein + Term 138694 - 138723 1.2 - Term 138675 - 138718 5.6 155 79 Tu 1 . - CDS 138737 - 140149 421 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 140178 - 140237 5.6 + Prom 140137 - 140196 7.2 156 80 Tu 1 . + CDS 140346 - 141359 1151 ## COG0320 Lipoate synthase + Term 141374 - 141418 8.5 + Prom 141378 - 141437 8.0 157 81 Op 1 . + CDS 141643 - 144108 2066 ## COG1960 Acyl-CoA dehydrogenases + Term 144177 - 144203 -1.0 + Prom 144123 - 144182 3.9 158 81 Op 2 . + CDS 144212 - 144595 466 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 144596 - 144644 4.8 159 82 Tu 1 . - CDS 144634 - 145170 500 ## ABSDF1188 hypothetical protein - Prom 145193 - 145252 3.8 + Prom 145272 - 145331 3.0 160 83 Op 1 . + CDS 145392 - 146774 1677 ## COG0499 S-adenosylhomocysteine hydrolase + Term 146783 - 146818 3.4 161 83 Op 2 . + CDS 146819 - 147682 1044 ## COG0685 5,10-methylenetetrahydrofolate reductase 162 83 Op 3 . + CDS 147701 - 148423 661 ## COG1385 Uncharacterized protein conserved in bacteria + Prom 148478 - 148537 8.2 163 84 Tu 1 . + CDS 148558 - 151407 2237 ## COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain + Term 151436 - 151471 -1.0 + Prom 151511 - 151570 5.0 164 85 Op 1 . + CDS 151644 - 153914 2752 ## COG0281 Malic enzyme + Prom 153919 - 153978 2.7 165 85 Op 2 . + CDS 154006 - 155244 1159 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase + Term 155255 - 155297 10.7 - Term 155239 - 155289 11.1 166 86 Tu 1 . - CDS 155294 - 156469 1395 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 156501 - 156560 8.2 + Prom 156449 - 156508 7.1 167 87 Op 1 . + CDS 156663 - 157421 835 ## COG0327 Uncharacterized conserved protein + Prom 157427 - 157486 5.3 168 87 Op 2 . + CDS 157567 - 158193 461 ## PROTEIN SUPPORTED gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent + Term 158205 - 158251 8.0 + TRNA 158340 - 158415 77.2 # Asn GTT 0 0 + TRNA 158597 - 158672 83.0 # Asn GTT 0 0 + Prom 158639 - 158698 36.2 169 88 Tu 1 . + CDS 158729 - 159172 304 ## ABBFA_001095 hypothetical protein + Term 159179 - 159216 -0.6 170 89 Tu 1 . - CDS 159182 - 159382 234 ## ABAYE1130 hypothetical protein - Prom 159419 - 159478 5.0 - Term 159420 - 159465 6.1 171 90 Tu 1 . - CDS 159494 - 160939 1611 ## ABBFA_001093 hypothetical protein - Prom 160966 - 161025 8.1 - Term 160991 - 161030 5.4 172 91 Op 1 6/0.074 - CDS 161050 - 161928 713 ## COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 173 91 Op 2 . - CDS 161925 - 162434 284 ## COG3161 4-hydroxybenzoate synthetase (chorismate lyase) - Prom 162498 - 162557 5.8 - Term 162507 - 162548 9.9 174 92 Tu 1 . - CDS 162560 - 163969 1594 ## COG0174 Glutamine synthetase - Prom 164045 - 164104 4.6 + Prom 164558 - 164617 9.5 175 93 Op 1 . + CDS 164710 - 166251 1311 ## COG3104 Dipeptide/tripeptide permease 176 93 Op 2 . + CDS 166248 - 168050 1811 ## COG0006 Xaa-Pro aminopeptidase + Term 168068 - 168121 5.7 + Prom 168385 - 168444 6.5 177 94 Tu 1 . + CDS 168538 - 169734 335 ## PROTEIN SUPPORTED gi|239523764|gb|EEQ63630.1| 30S ribosomal protein S15 + Term 169821 - 169857 3.3 178 95 Tu 1 . - CDS 169731 - 169925 188 ## ABSDF2451 hypothetical protein - Prom 170105 - 170164 7.9 - Term 170307 - 170341 2.0 179 96 Tu 1 . - CDS 170359 - 170901 552 ## COG3926 Putative secretion activating protein Predicted protein(s) >gi|333032502|gb|GL891924.1| GENE 1 462 - 788 300 108 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02429 NR:ns ## KEGG: ACICU_02429 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 108 1 108 108 130 100.0 2e-29 MFIAKNIFVYLLSMLALCLLIILFNYLGMNQTLNLIISSALFGIFITWYYKGSGLCIALF SFFYWAMFVISQSLEVIWMLSISVIVYLVMTQIVPELKHIHIGIASNS >gi|333032502|gb|GL891924.1| GENE 2 785 - 1255 309 156 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02430 NR:ns ## KEGG: ACICU_02430 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 156 1 156 156 290 100.0 1e-77 MNVRLCYASQRNEKNEDLLQDLRDILTEARDFNDLNGICGVLYYADNAFFQCLEGEQEVV ERLFEKIQKDQRHYNIKWLCTYSIDEHSFQRWSMKYVQRNTNIETFFLNMGENTFNPLLL NQQNLKFFLNELLIAEQTKMNTVKKVGMVNRGVNPF >gi|333032502|gb|GL891924.1| GENE 3 1419 - 1781 593 120 aa, chain - ## HITS:1 COG:HI1709 KEGG:ns NR:ns ## COG: HI1709 COG3111 # Protein_GI_number: 16273596 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Haemophilus influenzae # 1 120 1 121 121 64 32.0 4e-11 MKKILFTTLTGLVLLTSSTAFARTDSALLNQAAKNVVTVSKAKTLADETGVTLTGTIVKH IAGDHYEFKDKTGSIMIDVDDDLANGWQLKVGDKVRIVGEVDTHRVKPTEIEVLQIERVK >gi|333032502|gb|GL891924.1| GENE 4 2068 - 2712 457 214 aa, chain - ## HITS:1 COG:DR1224 KEGG:ns NR:ns ## COG: DR1224 COG0463 # Protein_GI_number: 15806243 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Deinococcus radiodurans # 2 99 10 100 183 62 34.0 6e-10 MKIGVVVPAHNEEQHLPACLQSIQEAIEKVPDEQVEVMVVLDSCTDQSRSIVQRYGVSWI ECNYACVGKARDLGIRQLIQNGATWLACTDADSVVSPDWLRCQILHQPTDAICGIVTLDD LSRLSVMKQKKYLSHYQDCMDHHHIHGANLSFSAAAYMQVGGFEPVPCHEDVSLIQKLIR QCCNITWSNLVRVTTSSRLEGRAPEGLSKFLENL >gi|333032502|gb|GL891924.1| GENE 5 2709 - 3308 433 199 aa, chain - ## HITS:1 COG:DRA0130 KEGG:ns NR:ns ## COG: DRA0130 COG0500 # Protein_GI_number: 15807799 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Deinococcus radiodurans # 7 162 7 162 198 116 37.0 3e-26 MIHSRVYFEELYRSNNDPWGYDYHWYEARKRQICLALLTRPHYERVLEIGCSNGHLSVYL AQRAAHLLCIDVSKQAVQLASQRLEAFEHVTVENRKIPEDFYEQKFDLIVISEVAYYLTF DELGEFIEQLKQALNPEGEILCCHWRHDIQDFELNAQKVHQSFQQSFPFHHYLSLNDPDF MVDVWTVNPSSIAQREQLR >gi|333032502|gb|GL891924.1| GENE 6 3283 - 4077 660 264 aa, chain - ## HITS:1 COG:SSO2901 KEGG:ns NR:ns ## COG: SSO2901 COG2120 # Protein_GI_number: 15899615 # Func_class: S Function unknown # Function: Uncharacterized proteins, LmbE homologs # Organism: Sulfolobus solfataricus # 44 205 8 153 193 87 32.0 3e-17 MGTLKHPLVEDRMISGEGTPEFMWLEAFKKNPLDRLNLKLFQSKRVVIVAPHPDDEVLGC GGLMQQLVEQNCHIVILAVSNGTQSHPHSVKYTPDQLNDLRPQETLAALNTLGISAFSER IGLNLMDGQIHLQTDQLNQALSQIVQPEDILICSYALDGHPDHEAVGKTVQAFAEARDLL CLHVLIWAWHWAEPFDTRINWSKAKAYALTENQLIKKHQAVMQFKTQLEADESTGNSAVL SSSAISRLLMPYEVYLSDSFSCVF >gi|333032502|gb|GL891924.1| GENE 7 4065 - 5054 692 329 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1299 NR:ns ## KEGG: ABAYE1299 # Name: not_defined # Def: acyl-CoA dehydrogenase-related protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 329 9 337 337 668 99.0 0 MTILSMLSEFEHAQAENKSQLRQDLLYQLVSLSKSLPYPASGHTYQRWQLFAQIAGYDLS LAKLFESHHDALSILNELGYQDEIDDQTWAVWAADGGPAPVQVQNNHCNGIKTWCSGAEF IQKALMSYKDKEGQAQLCIVDLAHPSVHVDLSHWQAVGMQGTQTAQVHFDNTPVIPIGLP NCYLERPGFWHGAAGVAACWYGAAVRLVSFLHKSCTLNPNAFKKMYLGELAQQLSVTKQY FQYIAKLIDDEPALSHEREIRILRAQTEQCCQSVIQLVGKALGARPYCEEPTFSQLIADL PVFIRQSHAAFDYESIAELCLPEKSLWEL >gi|333032502|gb|GL891924.1| GENE 8 5338 - 5571 337 77 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001210 NR:ns ## KEGG: ABBFA_001210 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 77 1 77 77 125 100.0 6e-28 MNTLNINDIKKHADVIASCGTKVGTVDHLEGENQLKLTKDENDQHHLIPTSWIGEVKEDQ VILNKNSEEVKENWQAI >gi|333032502|gb|GL891924.1| GENE 9 5719 - 7116 1368 465 aa, chain - ## HITS:1 COG:ECs3524 KEGG:ns NR:ns ## COG: ECs3524 COG1113 # Protein_GI_number: 15832778 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 8 453 9 453 466 433 52.0 1e-121 MNNDRTKKLGEGLSNRHITMISIGGVIGAGLFVGSSSAIAKAGPAVILAYLITSIMVFLV MRMLGEMAVLEPDTGSFSTYARKAIGPWAGFTIGWLYWWFWVLAIPVEAIAGAEILHSWF PSVSVSIYAFCFIVFLSLANFFSTKSFGEFEFWFSLVKVVAIIGFIIIGILAISGIWPLA KNVSGVANLYNNAGFMPHGMGGILAAILITAFSFFGVEIVSIAAAESSNPKQKIRRATNL VLYRIILFFVVSMFIAVSLVDWRSPDLQKYGTFQYVLMSLNVPGTKLIIDTVVFIAVASC MNAAIYTSSRMLFRLGTRNEAPQAVTKVNYAGVPAIAVFSSTFIGLVCCVINYVFPGKVF GLLLSSTGSIALLVYLVIAFSQLRLRHKLEAVGAEIPFKMWLFPWLTWFVIIIILSVLAY MFFSPAYSYETTLSLGVTLGVVVCGLFVTRKRKATRSVAINQSNL >gi|333032502|gb|GL891924.1| GENE 10 7219 - 8787 1783 522 aa, chain - ## HITS:1 COG:PA0130 KEGG:ns NR:ns ## COG: PA0130 COG1012 # Protein_GI_number: 15595328 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 28 521 4 497 497 701 65.0 0 MTNGLEDFSYDEVSTENSTQSEQAKKVLGHFIQGRIVSKTARKQPVYNPATGEISKEVEI ADAQTVNEAVQAAEQAFPAWRDTPVIKRARVMFKFKQLLEQNAEKICALIGQEHGKISHD AQGELQRGIENVEYACGAPELLKGEFSKNVGPDIDSWSEFQPLGVVAGITPFNFPAMVAL WMFPMALVCGNCFILKPSEKAPSVVLFLAELLKKAGLPDGVFNVVNGDKEAVDALLHHPR IQAVSFVGSTPIAEYIYRTATSTGKRCQALGGAKNHAIIMADADIDNVVTSLLGAAFGSS GERCMALSVAVAIGDEVADVVIDKLTQEMKKLKFGHYADASNDFGPLITQAHKDKVQAYI QSAEQQGAKIVVDGRDAKPAGYEKGFFVGPTLIDQVTPNMTSYQQEIFGPVLQVMRVNTM QEAMQLINDHEYGNGTCIYTRDGEAARYFSSHIQVGMVGINVPLPVPVAYHSFGGWKRSL FGDLHAYGPDGVRFYTRRKTITQRWPSAQVREAKQFSMPTLN >gi|333032502|gb|GL891924.1| GENE 11 8898 - 10280 1334 460 aa, chain - ## HITS:1 COG:PA0132 KEGG:ns NR:ns ## COG: PA0132 COG0161 # Protein_GI_number: 15595330 # Func_class: H Coenzyme transport and metabolism # Function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase # Organism: Pseudomonas aeruginosa # 27 456 15 444 448 713 76.0 0 MVMFDTDKFSDSEHTLDAVQTNNNMHINYQVHWMPFSANRNFAKDPRMIVGAKGSYLIDD SGREIFDSLSGLWTCGAGHTLPEIQQAVSAQLGQLDYSPAFQFGHPLSFKLADKIVQHMP EKLQHVFFTNSGSESADTSIKMARAYWRIKGKPSKTKLIGRARGYHGVNVAGTSLGGIGG NRKMFGQLMDVDHLPHTLQPNLTFTKGCAETGGVELANEMLKLIELHDASNIAAVIVEPI SGSAGCIVPPTGYLQRLREICDQHDILLIFDEVITGFGRLGTWTAAEYFGVTPDILNFAK QVTNGAIPLGGVVASHEIYSAFMQQDLPEHAIEFTHGYTYSAHPVACAAALAALEILEKK NLLAQSAALAPSFEKMLHGLKGAPHILDIRNCGLIGALQLAPRDGDATIRGFELGMKLWK EGFYVRFGGDTLQFGPMFNSTEADIDRLMNAVGDALYQVN >gi|333032502|gb|GL891924.1| GENE 12 10378 - 11295 710 305 aa, chain + ## HITS:1 COG:PA0133 KEGG:ns NR:ns ## COG: PA0133 COG0583 # Protein_GI_number: 15595331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 6 296 9 300 305 342 54.0 7e-94 MKPKKLNQVTDFDIKLLKIFKTVCDCHSFTSAESILGISRSAISLHMSDLENRLGIRLCQ RGRAGFALTDEGREILEYIEVLTAAIEDFRSKVNQMHNRLKGEFNIGIINNLVTMPRGYI TNTLTQLAEEHAEVIINISMSTLSDIECRVLDNRLHAGVIPLVTPLSGLDYFDLYSESSF LYCGKNHPLFNQCSNIHLNELKKWQAILPNYAITSEAAKLHQLLDCKATASDREGIAFLI LTGKFLGFLPDHYAKKWVEDGVMQPVLKDKMHYSTPICLITHKGKNHNNILKTFMEMLEK RIANN >gi|333032502|gb|GL891924.1| GENE 13 11922 - 12725 449 267 aa, chain - ## HITS:1 COG:DR1213 KEGG:ns NR:ns ## COG: DR1213 COG0515 # Protein_GI_number: 15806232 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Deinococcus radiodurans # 130 251 151 272 350 65 34.0 1e-10 MLKHDFASHIENLKCATKPRSEALGRHLWTCTIGADSYWLKFHLPNVHAQSEQDFLHELQ FYVDITYKKANWLLPFKIIEGSTVSQQPQFQGRVLVLPDTDCWFDDLDQKQNLKNINEKI YLTLVKLAELHELGWIHGDIKKEHFRKFKQELYLIDFEKTRLVSSPDPITDATPRYMAPE LFHGANKTVQSDLYALGIVLYEWLTQTRLQANSYHEWAVLHCQKLNVELPSSFQIFLPLL SGLLQKQQQNRFSNVHEAINCLKALST >gi|333032502|gb|GL891924.1| GENE 14 12712 - 14220 1538 502 aa, chain - ## HITS:1 COG:YKR089c KEGG:ns NR:ns ## COG: YKR089c COG1752 # Protein_GI_number: 6322942 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Saccharomyces cerevisiae # 17 472 145 615 910 249 33.0 7e-66 MFEKIRSDMNPHQAYRIKKLQRQLDMAESYEEWKSFALKLDEETGAQEWKFDNSSPYFDA ELISYRYTLLKRYRQQHRTLDLIYLLKEGLTYDIANIGHPMLFAATHVGTKKLIEDYIEE VSQSLAYIASSECITFQRKEKIEFFENCEKAYGQPALMFSGGATLGLFHTGVCKALIEQD LMPKVLSGSSAGAIMTGMLGISASEDIQNLLNGEQFFSDAFHFRKLRELIKGNGGIADVH YLKKFLIENLGDLTFEEAFKKSGLNINVAVAPYDATENPRIMNAIMTPNVLVWSAVLASC AVPVLFPPVRLTSKRYDGEHTPYMANTKWVDGSVRSDFPQERMARLYNLNYTIASQVNPH VVPFMQDDARRFRKDVLSWPERILRRQGKVLSMGLMDFTRQRLGAISPVRRLLDHGYGVV GQRYYGDVNIIAKYSLKHYAYTLQNPRPHLFKRLQREGERATWPKISSIETHARIGKTIQ HCLEVLRFEEKKQQPESYYAEA >gi|333032502|gb|GL891924.1| GENE 15 14399 - 15280 934 293 aa, chain + ## HITS:1 COG:NMA1415 KEGG:ns NR:ns ## COG: NMA1415 COG2607 # Protein_GI_number: 15794327 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Neisseria meningitidis Z2491 # 17 283 13 279 287 279 49.0 4e-75 MATIDLPDNLVQTLSLVLNQLQQVLPEPKQETDFTAPAFRWENQQLKAIYTPKNIYLDDL KGIERQKEKIIQNTLQFLNGLPANDVLLTGSRGTGKSSIVRALLTEYAPQGLRLIEIERD DLADLPKIQKIIQNRPEKYIVYCDDLAFNAEDENYRSLKSVLDGSLQSGSTNFIIYATSN RRHLLPEFMHENTPVTKVDVPQYTELHPQEAIEEKISLSDRFGLWLSFYPMDQNLYLEIV EHYLDKANMPFNDEVRAESLRWCQMRGQRSGRAAYQFSKHWIGLNALKDLSNN >gi|333032502|gb|GL891924.1| GENE 16 15384 - 16487 828 367 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02444 NR:ns ## KEGG: ACICU_02444 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 367 1 367 367 710 100.0 0 MKKQLPKISTTSKALAKSLLLAQGVLDQAKKYSTLPFTQTHIIRPRIDEKYYSWTHYGIF FPLLPEPHRYLNIMILIGTPGALAFDHDDIITGNPRKTATFFSSTAALEQALLKAYIISE DTKINKDGTLIELGQEISIQGKFPHIHINGHYDGFDFDFDIDITSHVSWFIKTPIYDHFS LLAKFKGFLNYQAKRIETQGLCTYEYARAVGPHSITNKLIPDAYKLPLDFFTYQIINLNE ATQLLLTKADIAGQTAAYTLHIRHLDQPAEIYTDVSFDIISHQVDDFVSPSGQKMRLPKY FSWIARNDAKQIILNIQAEIDCPFRYGHGRGYASSYIFTGHYFGNEVQGRGYIEYIDIEN PQAFEDE >gi|333032502|gb|GL891924.1| GENE 17 16490 - 17509 652 339 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229879751|ref|ZP_04499249.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Slackia heliotrinireducens DSM 20476] # 1 334 435 779 781 255 42 8e-67 AVLMIVLGLETSCDETGLALYDSELGLRGQVLYSQIKLHAEYGGVVPELASRDHVRKLIP LMNQLLEQSGVKKQEIDAVAYTRGPGLMGALMTGALFGRTLAFSLNKPAIGVHHMEGHML APLLSSQPPEFPFVALLVSGGHTQLMAAHGIGQYELLGESIDDAAGEAFDKVAKMMNLPY PGGPNIAKLALSGDPLAFEFPRPMLHQGLDFSFSGLKTAVSVQLKKLNGENRDADIAASF QEAIVDTLVKKSVKALKQTGLKRLVIAGGVSANLRLREQLETSLAKIKAQVYYAEPALCT DNGAMIAFAGYQRLKAGQHDGLAVTTTPRWPMTELTIPE >gi|333032502|gb|GL891924.1| GENE 18 17646 - 17861 356 71 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50084512|ref|YP_046022.1| 30S ribosomal protein S21 [Acinetobacter sp. ADP1] # 1 71 1 71 71 141 100 2e-32 MPQVKLKEGEPVDVAIRRFKRSCEKAGVLADVRKREFYEKPTQERKRKKAAAVKRYQKKL ARESVRTTRLY >gi|333032502|gb|GL891924.1| GENE 19 17888 - 18334 272 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 3 147 2 146 147 109 37 1e-22 MTTLKNQITDALKTSMRAKDMATVTVLRSLQAAIKQIEVDERIELDDAQVLAVIEKQIKQ RKESIKAFEGAGRDDLASKEQAEAEVLSQFLPEAMTEEELDSLIEQTIAAQEATSMKDMG KVMNSLRPIIAGRADPAQVSAKIKAKLA >gi|333032502|gb|GL891924.1| GENE 20 18425 - 19861 1244 478 aa, chain - ## HITS:1 COG:VC2164 KEGG:ns NR:ns ## COG: VC2164 COG4783 # Protein_GI_number: 15642163 # Func_class: R General function prediction only # Function: Putative Zn-dependent protease, contains TPR repeats # Organism: Vibrio cholerae # 1 474 1 477 484 165 29.0 2e-40 MKFLPVILSLALITNASYANPFDPKPASGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVH KQMSVIQDVWLEDQFFQVFSNILSETQLGQPIALVVIKDPQINAFAVPGGLFALNTGLIS SARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLAGLLAGVALAAQAGGDAGAAV MLGTQAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSRVSFLPD FWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQK NLAGLLALSAFYLKQGDYTQAQATLEQAKSSGKPLVALIQTDIYLGQNKLDQAYNSIAPL QMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNARDIQGWQLLQQAANLDKNSPL RAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI >gi|333032502|gb|GL891924.1| GENE 21 19999 - 20964 973 321 aa, chain - ## HITS:1 COG:PA3896 KEGG:ns NR:ns ## COG: PA3896 COG1052 # Protein_GI_number: 15599091 # Func_class: C Energy production and conversion; H Coenzyme transport and metabolism; R General function prediction only # Function: Lactate dehydrogenase and related dehydrogenases # Organism: Pseudomonas aeruginosa # 2 318 3 319 325 348 56.0 6e-96 MKKVVVFSQIDEEILSRLQQHYHVVVLNPKLGDINEQIRQEVVDADGMIGAGRLLNESNL SPAQKLKIISSVTVGYDNYDVGYLNQKKIWLANTPHVLTETTADLAFTLLLSAARKVPFL DHWTKQGEWKRTVGPQQFGLDVFGKTLGIIGLGNIGAAIARRGFYGFNMNIVYHNRREKP ELAEPLKAQYLGLEELLQQSDFVVTAVDLNAESKALMGKAQFELMQKHAIFINIARGSVV DEQALIEALQNEVIFAAGLDVYEKEPLQESALFNLPNVVTLPHVGSATAETRKKMANLAY KNLVEALEDKTPRYLVNPNFV >gi|333032502|gb|GL891924.1| GENE 22 20976 - 21626 509 216 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1279 NR:ns ## KEGG: ABSDF1279 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 216 1 216 216 401 97.0 1e-110 MIGQQRNILATLGIDVWIPRTQVCQKNNAHTLWRDQVVEPHESITVPTIDVPAFEQKNTQ PQVFEIPKVVEEPPIVVAEVSQPEILVEKPKVIAQETITPFELQAYCLEKCVIFVDVTAL ETEEKQLWVNIQKAKVGQYSELRWPFPLAAYQDQRGVGSYIQGFLDAVATEKKILCLGKC TYIQHANIIHLASLKEMLDKPLLKKRLWQLMQDNNE >gi|333032502|gb|GL891924.1| GENE 23 21727 - 23577 1756 616 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001190 NR:ns ## KEGG: ABBFA_001190 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 616 14 629 629 1206 100.0 0 MAWSITMCLVAVLLTIFILNLILGLLVHFFDYSEPIWWHALSPYFIALLLFIMVWSVVTE LYILRKGGHSLAKQLKARRLVKGESTPEEHAALKITEHLAQTFSLNVPTLYVLPDEVGVN ALTAGFHSNDIVIILTWGALQNLDELELYGLLGHEFNQILSGEAVENTKLKILYSGLTTF SQWGSKLAKQGFKRYSPGYKHKFETVFVAVGGVIWLAGSLGVLITRFIKYLTLSGRTFRN DQKTMRLLKNSTNTQTLLRIYVHHSGSQIHSAYSESIAHMCFANSLSPQSWMNIHPSIRE RIYELNPTLLQDLQLENLKKLRNRPLFSLFHVLEESETEIYTPWSSPQPLPLLRLSPISF ALNDAIKPLSSDIRRNKKRPELIQRALQTATGSREVMVAILMIRQYREFIPQDAPVSHAI VDALLNLDGRIHIQIFHDACKNIGHMPASIARQFLTKLALIIQEDGEIGLLDALLLERVK YELNLMPLHLPTAFEEVKPQIVRLIDALLHVQQINSPNQLEVRERILRSLLNPDEMHIYD EISDEPLDLAEILNDIAGLLLRDRLSILAIAEMCLWSDRIITQDELDVLELLYWRFGFES DEIVEQMQKKNSVMII >gi|333032502|gb|GL891924.1| GENE 24 23695 - 25236 1579 513 aa, chain - ## HITS:1 COG:PA3108 KEGG:ns NR:ns ## COG: PA3108 COG0034 # Protein_GI_number: 15598304 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Pseudomonas aeruginosa # 1 491 1 488 501 736 71.0 0 MCGVVGIAGKSPVNQMLFDALTMLQHRGQDAAGIVTCHEGRLFLRKDNGMVRDVFHTRHM RALLGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLR HMNTDSDSEVLLNVFAHELQKIGTLNPTPEDIFHTVSRVHERCQGAYGVVAMITGHGLVG FRDPNGIRPLIYGSRVTEQGEMEYIIASESVAITALGFKIERDIAPGEAIFINADGELFT KQCAADPKYRPCIFEYVYFARPDAIIDGISVYKARLKMGEKLAHKILRDWGEDHDIDVVI PIPDTSRTSALELANILGVKFREGFMKNRYIGRTFIMPGQQQRKKSVRQKLNPVELEFKG KNVLLVDDSIVRGTTCNEIIQMARDSGAKKVYFASAAPKVMYPNVYGIDMPAKTELIASE RSVEEIQEIIGADRLIFQDLEDLKNAVRTSKVPTLTEFDCSVFDGIYVTGGIDADYLNNL EQKRNDSAKKKKDGYIDVNIDAASVDLTGIKEE >gi|333032502|gb|GL891924.1| GENE 25 25262 - 25849 348 195 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02453 NR:ns ## KEGG: ACICU_02453 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 21 195 21 195 195 331 100.0 9e-90 MNTIDIIILILLLIGGLNGLRQGFIKAFANLVGWIFALIMGAKYAVLLAPSMSGLSQDPV VQKIAAFAFIALLIIVLTWIVTAFLNGLLKSLKLGPLNRLAGGAFGSLKGLLVVLITMQG VGPWVESSPHWKQSKFIQFLLPYAPLATELSKDAASEALHQITSGGGVTRTSPKPMDESE ETELRPDHSTKNPFY >gi|333032502|gb|GL891924.1| GENE 26 25856 - 26860 1178 334 aa, chain - ## HITS:1 COG:RSc1619 KEGG:ns NR:ns ## COG: RSc1619 COG0167 # Protein_GI_number: 17546338 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Ralstonia solanacearum # 2 333 5 342 344 410 60.0 1e-114 MLYSLARPMLFSLAPERAHELTLSMLDKAHKLGMMRQTVEAKPTTCMGIEFPNPVGLAAG LDKNGAHIDALAGLGFGFIEIGTITPRPQSGNPKPRLFRIPEAKAIINRMGFNNDGVDKL IENVKASKFRGILGINIGKNADTPVEKAVDDYLICLEKVYNYASYITVNISSPNTKNLRS LQSGDALTELLQTLKARQLELAEQYNHYVPLVLKVAPDLTAEDVEFISAQLLDFKIDGLI VTNTTLSREGVENLPYGNESGGLSGAPVFEKSTECLRLFAQTLKGQIPLIGVGGILSGEQ AAAKQQAGATLVQIYSGLIYTGPTLVKQCVEAMT >gi|333032502|gb|GL891924.1| GENE 27 26950 - 27423 547 157 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001186 NR:ns ## KEGG: ABBFA_001186 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: Bacterial secretion system [PATH:abb03070] # 1 157 3 159 159 209 100.0 3e-53 MLAQLQNRFDQWVEQIVQYLDRLTVRERIMVVFTTIFVVVVIVGYSLWKMHSLAEQQQKR LNDLKDLMVWMQSNAVTMKPANELELDKSGKIQRVAQQQGLTVSSQQNGEQLQIVVTHQN YAILANFLTQLAQMGLSIQKMEMVSSEGQIKLTATVQ >gi|333032502|gb|GL891924.1| GENE 28 27429 - 28553 873 374 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02456 NR:ns ## KEGG: ACICU_02456 # Name: not_defined # Def: general secretion pathway protein L # Organism: A.baumannii_ACICU # Pathway: Bacterial secretion system [PATH:abc03070] # 1 374 1 374 374 694 100.0 0 MPETNGVWHWSNGENWLQAASLDQLIQDLQIHQGKEATVFFPSRHAQMLQQTMAKSHYKQ LGADGVKYLLEEFVTLPIDHMKVVHHFHADQLTVLGVAQGVVETWQHSLALLPTKLVALL PDFLVLPEPQAQQVILCNIDHQLLVRENKWLGNSIDDLGLFLEFQSAETHYQYSGLTAEQ LESLEAASSAEQRSEFVYQFQPLDKTKQHPFNVLPKSKGQERTFSSYWKACAAVVLAIIV VQFSYDLLRWVKLKKVADQTAEQAIEQYKYWFGPSSRVTEQNIKGQFESHLRMSQQGDTQ ALSLLSRVGPILMQRQILAQQLNYDASILTMALKAKSADDLQALTQQLNQQGFKAELGNV QADGNGAIGVVKIQ >gi|333032502|gb|GL891924.1| GENE 29 28591 - 29046 493 151 aa, chain - ## HITS:1 COG:PA1616 KEGG:ns NR:ns ## COG: PA1616 COG2062 # Protein_GI_number: 15596813 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Pseudomonas aeruginosa # 1 130 1 130 154 59 32.0 2e-09 MQLTLVRHGEAAPPVNGNDIKRPLTARGHAQAEQTATFLKDIVKPDIFVVSPLLRAQETL AHIQTYFKDVPVLLCDKIKPDDDAKEAIEWLSQIPYESIVVVCHMNVVGHIAELLTHENF NPFALAEARIYDQAVIANGLSTQKNSFIPTI >gi|333032502|gb|GL891924.1| GENE 30 29103 - 30176 1409 357 aa, chain - ## HITS:1 COG:PA1614 KEGG:ns NR:ns ## COG: PA1614 COG0240 # Protein_GI_number: 15596811 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Pseudomonas aeruginosa # 23 351 7 335 340 323 50.0 3e-88 MAEFKFTDLVEPVAVDKKTALRITVLGGGSFGTAMANLAARNGCDTMIWIRDAETAEEIN KTHINKRYLPDFTLESSLRAVSDLEQAVCDRDIILVAIPSHSFRDVLKQIAPYITAQAVV SLTKGVEAKTFSFMSDIIREELPEVPYGVLSGPNLAKEIMAGMPSGTVIASDSELVRYAV QHALHSALFRVFGSDDVHGVELGGALKNIYAVAMGIGAAYKIGENTKSMILTRALAEMSR FAVKQGANPLTFLGLSGVGDLFATCNSPLSRNYQIGYALGSGKTLEQASKELGQTAEGIN TIVQVRGKAQELDVYMPITNALYEVIFEGAPPLNIALSLMKNGHRSDVEFVLPHHEV >gi|333032502|gb|GL891924.1| GENE 31 30211 - 30786 588 191 aa, chain - ## HITS:1 COG:PA3208 KEGG:ns NR:ns ## COG: PA3208 COG0778 # Protein_GI_number: 15598404 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pseudomonas aeruginosa # 16 189 10 184 186 134 41.0 1e-31 MTDSAIQIIHQNIHQRQSIGQLVEPAPNTDQLELAFQAALTAPDHHRLKPTRFVIVSGDQ RAAFGEVLAKALVDLGESDPAQLERVKQHPFRAPLLILALTQLQDHPKVPHFEQILSTGA AVQNLLLSLQAQGFATMWRSGAVVESNWLKQHLGLQPHDLISGIIYVGTAAKAIAPRADI DSKEFVKVWQA >gi|333032502|gb|GL891924.1| GENE 32 31017 - 31370 388 117 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1269 NR:ns ## KEGG: ABSDF1269 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 117 10 126 126 190 100.0 1e-47 MSGVVLLLGACATTPKNTLAIQKENNQFEVTGIGKTNLIAKNNAVTAAQKTCSKSTTPVI VDEKTSYHGVLKDVVSEKTGQMVEAAAGVIGTLTGKNASLAKDDDYQTTLTFYCKIN >gi|333032502|gb|GL891924.1| GENE 33 31409 - 32560 1342 383 aa, chain - ## HITS:1 COG:PA3861 KEGG:ns NR:ns ## COG: PA3861 COG0513 # Protein_GI_number: 15599056 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Pseudomonas aeruginosa # 5 374 11 380 397 466 60.0 1e-131 MTSGFETLNLHPQLKKAIDALGFTQMTPIQQKVLKYTLAGHDAIGRAQTGTGKTAAFLIS VINDLLNNPVQEQRFRGEPRALILAPTRELALQIESDAKSLTKFSNLHLVTLLGGVDFDK QKKQLDANFVDIMVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRY SPRKEQRQTLMFSATFSYDVLNLARQWLFEPVTVEIEPEQKTNNDVEQRVYVVAKQDKYR LLQDILREEPIDKVMIFANRRDQVRRLYDHLKKDGYKVGMLSGEIAQDKRLKMLEQFKQG KHNIMIATDVAGRGIHVDGVSHVVNFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDA FYLPEIEKAIGKKLPLTRLDGYC >gi|333032502|gb|GL891924.1| GENE 34 32664 - 32876 344 70 aa, chain - ## HITS:1 COG:PA1159 KEGG:ns NR:ns ## COG: PA1159 COG1278 # Protein_GI_number: 15596356 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Pseudomonas aeruginosa # 1 66 1 66 69 92 72.0 1e-19 MTAREQGVVKWFNDTKGFGFIQRNGGDDVFVHFRAIVGDGHRSLRDGQRVEFSVVQGQKG FQAENVQPLD >gi|333032502|gb|GL891924.1| GENE 35 33251 - 33496 178 81 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1218 NR:ns ## KEGG: ABAYE1218 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: Sulfur relay system [PATH:aby04122] # 1 81 1 81 81 143 100.0 2e-33 MSTTSSATTPIEINALGQPCPMPLLMLKRELKKLSGKQLFLLKSSDPHSEIDVTRYCQLH HFTCQTMQISEREFHYLIETQ >gi|333032502|gb|GL891924.1| GENE 36 33630 - 34496 1113 288 aa, chain + ## HITS:1 COG:PA0376 KEGG:ns NR:ns ## COG: PA0376 COG0568 # Protein_GI_number: 15595573 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Pseudomonas aeruginosa # 5 282 2 279 284 336 63.0 3e-92 MSDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERYYYDQDLDAAKMLVMS HLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPNMGVRLVSFAVHWIKAEIHEY VIRNWRIVKIATTKAQRKLFFNLRSLKKSSKKLTLEEAQSIANDLNVTPEQVLEMEGRLT AYDAAFEAQGDDDDDTPHTAPVLYLEDNRYDPARLVENEDWEEQSTSALHDAMNQLDDRS RNILQRRWLDDDKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSAS >gi|333032502|gb|GL891924.1| GENE 37 34608 - 34973 366 121 aa, chain + ## HITS:1 COG:SA0540 KEGG:ns NR:ns ## COG: SA0540 COG2363 # Protein_GI_number: 15926261 # Func_class: S Function unknown # Function: Uncharacterized small membrane protein # Organism: Staphylococcus aureus N315 # 1 120 3 121 122 81 46.0 4e-16 MWIAISALNLAFAVMLGAFGAHGLKAHASPEQLAWWQTATDYFFYHALGLLALGILSKVL PHFPIKLSFLLIQIGILFFCGSLYIMALGLPRILGAITPIGGALMIAGWLILAWNAFKYA K >gi|333032502|gb|GL891924.1| GENE 38 34987 - 35184 297 65 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001175 NR:ns ## KEGG: ABBFA_001175 # Name: thiS # Def: thiamine biosynthesis protein ThiS # Organism: A.baumannii_AB307-0294 # Pathway: Sulfur relay system [PATH:abb04122] # 1 65 1 65 65 109 100.0 4e-23 MQIYLNGELTDTPSQNLLQLIQELALEGKRFAVEHNQQIVPKSKLEQITIAQHDRIEIIH AVGGG >gi|333032502|gb|GL891924.1| GENE 39 35198 - 35983 1097 261 aa, chain + ## HITS:1 COG:PA0381 KEGG:ns NR:ns ## COG: PA0381 COG2022 # Protein_GI_number: 15595578 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Pseudomonas aeruginosa # 3 257 8 262 265 375 74.0 1e-104 MQDTPLIIGSRSFQSRLLVGTGKYKDLNETDLAIQASGAEIVTVAIRRVNIGQNPDQPNL LSVIPPEKYTILPNTAGCFDADSAVRTCMLARELLDGHNLVKLEVLGDEKTLYPNVTETL KAARTLIDDGFEIMVYTSDDPIIAQELESMGCVAIMPLGSLIGSGLGILNPHTISIIKEN AKVPVLVDAGVGTASDAAIAMELGCDGVLMNTAIAAAQNPILMASAMKKAVEAGREAFLA GRMPRKRMANASSPETGYFFK >gi|333032502|gb|GL891924.1| GENE 40 36122 - 36745 502 207 aa, chain - ## HITS:1 COG:mll0172 KEGG:ns NR:ns ## COG: mll0172 COG4339 # Protein_GI_number: 13470459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 32 207 17 198 203 110 35.0 1e-24 MLMQLYLLKLELFWFELHQHYHFSEPQKILNELIAAYSEKQRAYHTVQHLYECLSLIETI QSELNDPYAVALALWFHDVVYEPQALDNELKSAELFEQLMAQDLQLDTMQKIKRWILATQ KHAPTDETDLQFLLDIDLAILAATPERFIQYEQQIQQEYSWVDPEVYSIKRKEVLMNFYQ SEPLYQTAYFQKNFELNAKQNLKKILE >gi|333032502|gb|GL891924.1| GENE 41 36765 - 37538 895 257 aa, chain - ## HITS:1 COG:yaaA KEGG:ns NR:ns ## COG: yaaA COG3022 # Protein_GI_number: 16128000 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli K12 # 1 257 1 257 258 342 65.0 4e-94 MLALISPAKTLDYETALPTDEFTQPRLLEHSAQLIDVCRKLSASEIASLMSVSEKIATLN ADRFRDWKPEFDFSNARQAIYAFKGDVYTGLDAYHLKDKDIDFAQQHLRMLSGLYGLLRP LDLMMPYRLEMGTKLKNTRGHNLYEFWDDIITNRINEDLAAIKSELLVNLASDEYYKSVN EKKIKAEIVKPVFLDQKNGKYKVISFYAKKARGLMARFIIENQLNKAEDIKAFNTEGYYF DADNSSAKELVFKRDEQ >gi|333032502|gb|GL891924.1| GENE 42 37666 - 38298 738 210 aa, chain + ## HITS:1 COG:RSc0328 KEGG:ns NR:ns ## COG: RSc0328 COG2945 # Protein_GI_number: 17545047 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Ralstonia solanacearum # 6 203 9 207 215 149 40.0 3e-36 MSEQIFIQGPVGKIELFVDRPEGEIKGFAVVCHPHPLQGGTPQHKVPALLTQIFNEYGCI VYRPSFRGLGGSEGVHDEGHGETEDILAVIEHVRKLHAGLPFYAGGFSFGSHVLAKCHAQ LSPELQPIQLILCGLPTATVVGLRHYKTPEIQGDILLIHGEQDDITLLSDAIEWAKPQKH PITILPGANHFFTGYLKQLRQIITRFIIMK >gi|333032502|gb|GL891924.1| GENE 43 38495 - 39451 794 318 aa, chain + ## HITS:1 COG:alr5152 KEGG:ns NR:ns ## COG: alr5152 COG1234 # Protein_GI_number: 17232644 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily III # Organism: Nostoc sp. PCC 7120 # 2 276 1 273 322 160 33.0 3e-39 MLHFTFLGTSSGVPTLSRNVSGLAVRNSKNKDWILVDTGEGTQHRIQQARLSLQNLIAIC ITHVHGDHCYGLVGLLASAGMNARTKPLIVIAPKEIQQWFEITAQLTDLHLPYSIKFIDV NEATRPQQLTDELFIQAHPLSHRVPSFAFSIYIKSTQKKIDIQALTQLGVPKGDIWGHLK RGYDVEFEGRILKSQDFIKIQKQQIHAIIGGDNDRPELLADTCKDAQLLIHEATYLQTVL DKVGKGPMHSSAKMVAEFAEQQSLDNLILTHFSPRHQDKTGQQAITEEVRQFYKGHFYLA NDFDEFTLSETGQLLKIE >gi|333032502|gb|GL891924.1| GENE 44 39523 - 40983 1478 486 aa, chain - ## HITS:1 COG:VC2279 KEGG:ns NR:ns ## COG: VC2279 COG2195 # Protein_GI_number: 15642277 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Vibrio cholerae # 3 485 49 530 534 417 43.0 1e-116 MTQVDIAALSPQVVWQHFQTLCTIPRPSKHEQQLREFLQNWAESRNLETYVDEVGNLIIR KDATAGKEHVSGVILQGHLDMVTQANTGTVHDFFKDPIRPVLEDGWLIAKDTTLGADNGI GVALALAVLDSNDIAHGPIEVLLTVDEEAGMSGARLLETGVLKGKWLFNIDTEEWGELYL GCAGSIDVEVEQPLSYEPIPENLNIVNIQVAGLKGGHSGVDIHLGRGNANVILARFLNQH LASLGGYLVEFIGGTARNALPREAVATIAISPNQLSSLEKLLAEYQTTWKKQLKGIDDNL QLSIQSTGVEVTEVINQQQQNEWLQALATSPYGVASMSQVLPDVIETSNNIGVVRLNREG GKAVLMVRSMVNQEAQDFAEKIQAHFSQFNIGSTLTPLVSGWTPNPDSAALKCLQQAYQN AFNIEPNLKVIHAGLECGIIAEHYPHLQMVSFGPDIQGAHAPGERVKVDTVEKCWKLLVT ALASVE >gi|333032502|gb|GL891924.1| GENE 45 41154 - 41537 416 127 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1208 NR:ns ## KEGG: ABAYE1208 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 127 12 138 138 241 100.0 8e-63 MKKLQFIASCPQHGVLDHPPNECHITQEYVAALLFKQLGNYGFDAQHIVHEHEKVEVSID NHLLPLSITCQQTDHDGHLMCEISANPDEEQDWFEKIETQSIIRQLAQAVENSLKADHSF SAFEWKS >gi|333032502|gb|GL891924.1| GENE 46 41665 - 43935 2511 756 aa, chain - ## HITS:1 COG:PA3164_2 KEGG:ns NR:ns ## COG: PA3164_2 COG0128 # Protein_GI_number: 15598360 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Pseudomonas aeruginosa # 323 754 3 424 427 558 66.0 1e-158 MSKSKVEVMSQPLFKKVAFIGLGLIGSSLARVIVAEKLATTIVASTRSQKTLEDAKSLGL IQEGFSDPVEAVKGADLVVLALPVRATQKVLEQIKPYLSETTIVTDVGSTKGNVVDAAKA VFGEDLPAGFVPGHPIAGSEHTGVHAGKVDLFANHKVILTPLPTSAEWAVEKLIQLWSAA KAEVICMDVAKHDEVLAHTSHLPHLMAFNLVEQLANREDNLDIFRYAAGGFRDFSRIAAS DPQMWHDIFFANKTAILNAVDGFEKQLTVLRKLIENEDSHALMGLLGHAQAARQHFNHML AKKPLMEKNKVTQQFSILPGNKAFKGKFTVPGDKSVSHRSIMFGAIAEGTTHVTGFLEGE DALATLQAFRDMGVSIEGPKNGEVTIHGVGMYGLKAPASALYMGNSGTSMRLLSGMLSAQ KFDSVMTGDASLSKRPMERIAKPLRLMGAQIQTTGEKGTPPVSITGGQQLKGIQYDLPMA SAQVKSGILLAGLWAEGETSVTEPEPTRDHTERMLRAFGYDVKTEGNKISLVGGGKLVGT NIQVPSDISSAAFFMVGAAITEGADVVLEAVGINPTRTGVIEILKQMGADLTVENERIAG GEPIADIHIKGSRTLKGIHMPEDQVPLAIDEFPALFIAAACAEGQTVLTGAAELRVKESD RIQVMADGLKIMGIDCTPTEDGIIIEGKGKSGDWSPIFAGGEIESHHDHRIAMSFSMAGL RTSGPITIHGTETVATSFPTFTELANRAGLTIEVSQ >gi|333032502|gb|GL891924.1| GENE 47 44020 - 45129 1425 369 aa, chain - ## HITS:1 COG:PA3166_2 KEGG:ns NR:ns ## COG: PA3166_2 COG0077 # Protein_GI_number: 15598362 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Pseudomonas aeruginosa # 98 369 1 272 272 331 56.0 1e-90 MINDDQNKTTSLSLEQIREDIDSVDQQIQELLNRRASLAEAVAKAKFASEENPLFYRPER EAQVLRKVMERNQGPLSDVTMARLFREIMSACLALEAPQSIAFLGPEGTFTQSAVLKHFG KDAVVRPLPTIDEVFREVEAGSAHYGVVPVENSSEGIVNHTLDCFKTSNLNVIGEVELRI HHQFLVSENTRKDSIKQIYAHQQTLAQCRQWLDAHYPGVERVALNSNAEAARRIRNEWHS AAIASDIAAGMYNLEILHSNIEDNPENTTRFLVIGREKIPQSGNDKTSLLISAHDRAGAL LEILAPFAKHNISLTSIETRPALPEKWAYVFFIDLEGHIDQENVAAAINEIRPMVKELRI LGSYPAAVL >gi|333032502|gb|GL891924.1| GENE 48 45381 - 46259 703 292 aa, chain + ## HITS:1 COG:BS_yuiI KEGG:ns NR:ns ## COG: BS_yuiI COG2819 # Protein_GI_number: 16080254 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Bacillus subtilis # 23 271 52 303 314 120 31.0 3e-27 MAQAPVKNQSKIDFHNNQAQFQIKSKNTGHEYLIQIYKPPVAPPQHGYPVLYILDGNATF PSAINIAQSIGAGSAKLGLDPLIIVAVGYPQQKTFDVQKRAYDYTPKPSAEFQAQGKYKY GGADQFIAFLNNELKPEIAKQFPINSQQQSLYGHSFGGLFVLYHFFQKPTAFQRYFAASP SLWFDQGMLFRELEQWQSQKQTVFPMLMTTVGTHEQGGPHTQFNQRINKDDFFKVLENKR SDQFTYWHFNNPAEQHITNLYASLPKALMFASCQNLESCKSLFDEPSQKTAK >gi|333032502|gb|GL891924.1| GENE 49 46303 - 47448 1529 381 aa, chain - ## HITS:1 COG:PA4435 KEGG:ns NR:ns ## COG: PA4435 COG1960 # Protein_GI_number: 15599631 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 4 377 10 381 381 409 51.0 1e-114 MLAYDADLELFRDNFKRFMNEHIAPHYDQWEREGIMPRSVWSQLGENGFLCVDVPEEYGG YGVPTYYSLMLVEESARAGFCALSTAISCHSEIAAPYILHIGTEEQKQYWLPKMVTGEVV GAIGMTEPGAGSDLQSMRTSAILQDDHYLLNGSKTFISNGQHADLVVLAVKTDPQARAKG VSLLLVDTHLEGFKKGTNLDKIGLHSQDTSELFFDNVKVPKNQLLGQAGQGFAYLMQELP RERTAIASTAVGAIRGAIDLATAYVKERHAFGQPISQFQNTRFVLAQAKIDELATTAFYE RNVALYQEGKLDVETAAALKSFSTDMQMKVADNLLQLFGGYGYMTEYPISRFFVDARIQR IYGGTNEIMKEIVARGLIGKA >gi|333032502|gb|GL891924.1| GENE 50 47612 - 48970 1332 452 aa, chain - ## HITS:1 COG:PA1183 KEGG:ns NR:ns ## COG: PA1183 COG1301 # Protein_GI_number: 15596380 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Pseudomonas aeruginosa # 1 429 1 415 436 564 70.0 1e-160 MAKKPIYKSLYFQVIIAIIAGVLVGHFSPSTTQIVNGVEQHIPGLGEQLKPLGDAFIRLI KMIIAPVIFCTVVSGIAGMESMKSVGKTGGVALLYFEIVSTIALLIGLVVINIAKPGVGM NVDPATLDTSGIQKYVTSGESQSTIDFLMHIIPDTVVGAFANGEILQVLLFAILFGFALH KLGDAGRPVLKLIDQIAHVFFNIVNMIMKLAPIGAFGAMAFTIGKYGVGSLVQLGQLIIC FYITCLLFIFLILGTISRISGFSILKMIRLIREELLIVLGTSSSESVLPRMLRKLEIAGC EKSVVGLVIPTGYSFNLDGTSIYLTMAAIFIAQATNTQLDIQHQITLLLVLLISSKGAAG VTGSGFIVMAATLSAVGHIPVAGLALILGIDRFMSEARALTNLVGNSLATIVVAKWVGAL DKDKLNDALNNPDEVDRKMLAPKNPQVAEGLD >gi|333032502|gb|GL891924.1| GENE 51 49470 - 50483 847 337 aa, chain + ## HITS:1 COG:PA2609 KEGG:ns NR:ns ## COG: PA2609 COG0547 # Protein_GI_number: 15597805 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Pseudomonas aeruginosa # 11 333 7 326 327 325 51.0 6e-89 MNTKRNIYKDAEHPFAQYVRILGKGKTGSRSLSYEEAYQAFTMILKGEVLDVQLGAFLML LRVKEESIDELAGFVQATKDQLHFAPLEVDLDWSSYAGKRKHYPWFLLAALTLAHHGYKI VMHGASGHTINRVYTEQVLEYLDYKICHSEQEVRTQLAEQNFAYLPLEVISPVLSELISL RNVMGLRSPIHTLARLINPFNAKATLQAIFHPAYRTSHQHSALRLGYQNSAVIKGEGGEF ERNPDAKTLICGIKNGELYEHELPKLTPERSPIEEELDLATFKAVWLGQQHHEYGEMAVT ETMGIALYTMGVVSNFEEAMQKAKVLWETRNLSNLNS >gi|333032502|gb|GL891924.1| GENE 52 50685 - 50957 451 90 aa, chain - ## HITS:1 COG:PA3085 KEGG:ns NR:ns ## COG: PA3085 COG3139 # Protein_GI_number: 15598281 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 2 62 3 63 87 78 59.0 3e-15 MNIEQMLSVLNPEIVERLKTAVEIGKWPNGVALTKEQRETCMQAVIAWELKNLPEEQRSG YIDRGTKEEGEVCEDDHHKHEPEFKPIRFV >gi|333032502|gb|GL891924.1| GENE 53 50954 - 51862 884 302 aa, chain - ## HITS:1 COG:PA3088 KEGG:ns NR:ns ## COG: PA3088 COG0061 # Protein_GI_number: 15598284 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Pseudomonas aeruginosa # 8 290 4 287 295 305 54.0 8e-83 MQISHKSFRNVGLIGRPDKSSVVETLCLIHDHLLSLGLNPIFDQETAELVPYDHAQVVSR HLLGEVADLVIVVGGDGSLLHAARALVRYNTPVIGINRGRLGFLTDIKPSEAIFKLDQVL QGHFQLDRRFLLEMEVRTNGEVIYDAIALNDVVLHSGKSVHMIDFELNIDGQYVYRQHSD GLIVSTPTGSTAYALSGGGPILHPSMDAIALVPMHPHTLSSRPIVVGGQSEIKIVIRENR VLPMVSADGQHSVSLNVGDSLHIRKHPFKLSLLHPPGYDFYMACRTKLGWNQDFESFQRD ES >gi|333032502|gb|GL891924.1| GENE 54 52048 - 54444 2498 798 aa, chain + ## HITS:1 COG:PA4700 KEGG:ns NR:ns ## COG: PA4700 COG0744 # Protein_GI_number: 15599894 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Pseudomonas aeruginosa # 28 744 41 758 774 653 45.0 0 MKFERGIGFFALIFSILVIGAFIALSIYLIRLDNIIREKFEGQRWDIPAKVFARPLEIYN NAPITQANFTQELKLLGYKTSSNYDKSGTYVAQGSNMYVHTRGFDYGDSVESEQVLELSF ANDQVVEVRSTKPSSTGVARLEPLLIGGIYPQHNEDRVLIKLNSVPKPLIEALISTEDRN FYHHHGISIRGTARALVSNVTGGRRQGGSTLTQQLVKNFYLTPERTLKRKVNEALMALLI ELHYSKDEILEAYLNEVNLGQNGNYSINGYGLASQFYFGLPLRELNVAQQAYLVGLVQGP SLYNPWKNPEGAKNRRDTVLNNMRVMGYLTQAEYETEIARPLNVLSKPSLGPAKFPDFLD IVRRQLRTEYQESDLTNQGLRIFTTLDPIAQTQVQNAFKASVERLANSNPARLKNLQGAV LIAHPENGELIAAVGSTQDFTGFNRALDAKRQVGSLLKPVIYLSAIESGRYNWASQIEDA PISVPVDGGKSWTPKNYSGGGHGIVSLSEALANSYNLSAVRLGQEFGLSTFTNNLRKFGV ESTIPAYPSIFLGAVNMSPMEVLGIYENFATGGFKYPTRAIRSVVDANGRLLDRYGLNVQ QTIDPSVGYIMNYGLQQVMSSGTGRAAYNSLSPALKLAGKSGTTNDTRDSWFAGYSGNHV AVVWLGLDDNKVTGLTGSSGALPVWINVMKQLRQTPVNLRQPDSVQWQWIDRASGDLSAQ ACDGAMYIPMLAHTVPHRATPCGAPYYQVDPTYTPQSDNTIPEPQDDNTDSYIRESENQM EQDLSNNTRIISSGSYNN >gi|333032502|gb|GL891924.1| GENE 55 54465 - 55016 598 183 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001159 NR:ns ## KEGG: ABBFA_001159 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 183 1 183 183 281 100.0 7e-75 MLKKGVFYIGAVLMVGCTTLPDHSAPKEKTPPVSEKKKSESSSGVKITPYDHPEIQRKSL QVIVPQQKKPQRFNDDGSQLPAFKTLMQKTEQAYKNQQWSEAERYALQAQRLAPQAAETY LFLALTANHKQQYSNAESLARRGLSFAQSQAMKKQLWLVILKAGQQRNNPKTVQEAQQAL KAF >gi|333032502|gb|GL891924.1| GENE 56 55038 - 55937 843 299 aa, chain - ## HITS:1 COG:RSp0984 KEGG:ns NR:ns ## COG: RSp0984 COG0352 # Protein_GI_number: 17549205 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Ralstonia solanacearum # 196 296 87 187 198 99 48.0 7e-21 MPKPIVDVAIAILIHRGKILVGWRGEQQHQGGKHEFPGGKVEQGETPEEACRREIYEEVG IGLKDWHQFDYIHHEYDDIIVNLHLFHSYVPDELLNLIHQPWTWYTREQLLHLNFPKANK DIIKRLYWPHFIKISHTLTSVENSDALLYWRIEDEFGPREVEQLTALDEGQRSNLIINVD IWQQLNPELKKQIKTVHLKQSQLMSLHKGDLEVGVRFIAACHDAVSLQHAQQIGCDAVFV SPVKVTATHPDVSALGWDRFADLIEKCQIPVFALGGMSPDDLATAQQHGAYGLAGIRNF >gi|333032502|gb|GL891924.1| GENE 57 56074 - 56244 229 56 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001157 NR:ns ## KEGG: ABBFA_001157 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 56 1 56 56 92 100.0 4e-18 MNAPFSLFTRNTDSAHALPMLHSNNLFALGREIRIMHAGEEYRLRLTRNNRLILTK >gi|333032502|gb|GL891924.1| GENE 58 56310 - 57620 1164 436 aa, chain - ## HITS:1 COG:RSp0524 KEGG:ns NR:ns ## COG: RSp0524 COG0642 # Protein_GI_number: 17548745 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 96 429 133 468 492 148 30.0 2e-35 MWSSIVVGLLALSLLTIFSIYHNMSVQDEIMDEISDTLLVSDLSKHSMKQFDELSDEFDI QYELLDTGQVLTHSHTYQHELFEKGNLSEGFSYFWFDGQLWRSLAAQQEDSQLQVEVFQP ISTRIEEVLKALAGYSGLMVLFWLLQWVIVSWRTEQQLAALNLLSKRIAQKTASNLEPIQ EPDVITEIQPVIDALNQLLARLQRALVAEQRFTADASHELRSPLSAIQMRLQVLQRKYQH IPELDHDFERIQEDVSRSTKILENLLLLARLEPNETEQLELSKSVVDLNHVLARVIDTVN IDAQAKHMVIGTNILSNETKTFANEELMFIAFRNLFDNAIRYSPALGAIHVELSQYQQKL KISIEDTGNGVDDEVLRRLGQRFFRVLGTKQQGSGLGLSITKKIIQLHGGELHFMHASQG GLKVEVILPFNREIQK >gi|333032502|gb|GL891924.1| GENE 59 57665 - 58327 680 220 aa, chain - ## HITS:1 COG:PA4776 KEGG:ns NR:ns ## COG: PA4776 COG0745 # Protein_GI_number: 15599970 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Pseudomonas aeruginosa # 1 214 1 214 221 183 43.0 2e-46 MRILLAEDDRSQAESIQSWLELDGYQVDWVERGDYALTAIEQHDYDCILLDRGLPQLAGE KVLTTIRHKQKNVPVIFITARDSIHDRVEGLDLGANDYLVKPFSLEELSARIRAQLRKQT LNQQSILTWGDLQLDTQAKVVLCAGKTIDLTAKEFQILRKLMVHPEHIITRDQLEEALYA WGEEIESNAIEVFIYQLRKKIGSSSIKTIRGLGYRMGDLK >gi|333032502|gb|GL891924.1| GENE 60 58435 - 58794 527 119 aa, chain - ## HITS:1 COG:ECs1244 KEGG:ns NR:ns ## COG: ECs1244 COG3111 # Protein_GI_number: 15830498 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 33 119 29 112 114 70 44.0 7e-13 MKMLKVILMTAGMATAGVVVANTPVNQAAIAPATVTTVKQALASKDNTPVKLHGQVVKSL GDEKYQFRDKSGSITIDVDDELWQGRPVSANTNVTLIGEVDIDYKPLKRVEIDVDQVQF >gi|333032502|gb|GL891924.1| GENE 61 58876 - 60633 1817 585 aa, chain - ## HITS:1 COG:PA5210 KEGG:ns NR:ns ## COG: PA5210 COG2804 # Protein_GI_number: 15600403 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Pseudomonas aeruginosa # 19 583 25 589 594 602 56.0 1e-172 MNIHVEIDTHWCLEQLLQEGRITERDKLLVQTTNRQKDQLKWHPLQWIAHFNLKDQHHVQ AHLSLNRLCQWFADRAQLPLFVIDPLKADVSALTQVMSQEFAIRNHILAVEVHTDRIVIG TDQPFQTDWLNNLEKSLAPKKIERVFLNPEQLQRYLREYYQVSRAVNSAQKDAAHDRDNN GVEALLQLGDSQNPDANDQHIVKLVDWILQFAFEQSASDIHMEPRKDNGKVRFRIDGVLH TIYNMPSNTLTAVISRIKILGRLNVAEKRKPQDGRLKTRTPKGQETELRLSTLPTAFGEK LVMRIFDPDVLVRSFQQLGFDQSLLQQWQRITQNSHGIILVTGPTGSGKTTTLYSSLKQL ATEQVNVCTIEDPIEMLEPSFNQMQVNHAIELGFADGVRALMRQDPDIIMIGEIRDQDTA NMAIQAALTGHLVLSTLHTNDAPSSLTRLHDLGVQPFLTAATILGVLAQRLVRKLCPNCK QQTHINEDEWQHLTFDYIMEMPEKVYRAVGCEECRHTGYKGRIGIYEFMPVSLELKHLIS SHATLNELRSQTKKESVEPLRIAGARKVLEGLTTLEEVLRVVPLN >gi|333032502|gb|GL891924.1| GENE 62 60921 - 62189 1042 422 aa, chain + ## HITS:1 COG:PA0043 KEGG:ns NR:ns ## COG: PA0043 COG3174 # Protein_GI_number: 15595241 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 24 227 57 269 460 83 31.0 7e-16 MNLPMTMSLQTVSFEEFITTIAAALGCGLLVGLERERSKLKHEYKTFAGFRSFAISSLLG AVCFLFGTAIGIVGALLIGAISIVSLKNQPNDPGVTTELAFIMTYFIGALCIWNISLAAG LAVIMTIILLAKQSMHGIASQWITESELRDGIFLLALLLIALPLVPNKPFWGPVLNPHVI LKLLTLILFVQALAHIAKRLLSSKNALLLSSLASGFVSSTATIASLGLEVRSGRANAKTN AGAALMSCVSTLVQTLIIVVGISLAWFKLIIFPTLIALAFLAVWAFILLRKAELSTTSSE LDTRMFSLKEAIIIAGTLTLIQAGVYGLSLYLGNAGLIAGTLLASLFEIHAAIAAVIVQG EPNNSQTSLLIAFMGGFAVHAIAKSINSAISGGLHYALAFIPAQILHMTIFISLLWMNIH WF >gi|333032502|gb|GL891924.1| GENE 63 62199 - 62930 691 243 aa, chain - ## HITS:1 COG:PM1170 KEGG:ns NR:ns ## COG: PM1170 COG1720 # Protein_GI_number: 15603035 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pasteurella multocida # 4 226 5 224 246 187 44.0 2e-47 MMNSVTLPIVGHMCSPFREKFGIPRQPNLVNIESYIEMVEPYNDLLAFEGIEQFSHLWLI WQFHDNKNQETATKFRPQVRPPRLGGNEKIGVFATRSMYRPAPIGLSVVRLNKVEKVGKS LRVYVTGSDLLNGTPILDIKPYIHYSDAIVDAQSGYAQAEPERKSVLWSENALSTQQSLF KNKEINAQYLDELEKVLSLDPRPAYQEDPERVYKMKFSNFDIHFKVNGNVITVVDMVKDT SLV >gi|333032502|gb|GL891924.1| GENE 64 63032 - 63811 932 259 aa, chain + ## HITS:1 COG:PA3397 KEGG:ns NR:ns ## COG: PA3397 COG1018 # Protein_GI_number: 15598593 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 1 259 1 258 258 371 69.0 1e-103 MAAFNVERITHVHHWNDTLFSFKTTRDASLRFKNGQFVMIGLEVNGKPLMRAYSIASANY EEELEFFSIKVQDGPLTSILQKVQVGDEILVSKKPTGTLVHDDLLPGKNLYLLSSGTGLA PFLSIIRDPETYERFEKVIVVHGTRYISELAYQDLILNELPNNEFFEELGIKDKLVYYPT VTREPFHTQGRVTTAIETGALFEKIGLPRFNRETDRAMLCGSPAFLKDVAALLDQHGLVE SPRMGEMGDYVIERAFVEK >gi|333032502|gb|GL891924.1| GENE 65 63866 - 64735 889 289 aa, chain - ## HITS:1 COG:YHR029c KEGG:ns NR:ns ## COG: YHR029c COG0384 # Protein_GI_number: 6321818 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Saccharomyces cerevisiae # 3 289 4 294 294 174 36.0 1e-43 MSVVAFKQVDVFTSQAFKGNPVAVIMDASTLTSEQMQEIANWTNLSETTFVLPATDSHAD YQVRIFTPQSELPFAGHPTIGTAYALLEAGLVTAKGGKLVQQCGAGLVTLTVSDSKHISF ELPQPKITPLDAIHTEKLVEILKCEINTQWNATLVDVGARWVVLQAVNAEAVLATQPDFA ALKQHDLEMKVTGATVFGFYENNDEQKHIEVRSFAPSCGINEDPVCGSGNGSVASFIRYH GILPAQNDVVFSSQGQALGRDGQLKLELYQDKILVGGTAVTCIDGSITL >gi|333032502|gb|GL891924.1| GENE 66 64970 - 66433 1175 487 aa, chain + ## HITS:1 COG:PA4132 KEGG:ns NR:ns ## COG: PA4132 COG1167 # Protein_GI_number: 15599327 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Pseudomonas aeruginosa # 1 471 1 469 471 303 35.0 7e-82 MYKYKKVSDDLTLQIQNGRQPVGSRLPSIRDCAQHYQVSINTVKEAYRKLEDQGLISVRP QSGYYVCHAPSNLPDLEERYISEEKVPLSGISCFLAQIVKKQMDPDYINLALACPSGENF YPIERLKRLTAQVLRTQPDIFKSYTLPPGGSIRLRTQIARRSLQLGMFLSADDIVLTHGT MEALSLAIMATTQAGDSIALEIPTFHNLYPLLQNLGRKIVEVPTSPHTGMCLDALEELLK SQSVQAILTIPTGHNPLGFSMPENNRRRLAELANQFQIPVIEDAMYAELQLTEPLLPNIK AFDQNGWVLVCGSYTKTVAPDYRIGWLEAGRFRNIVQQLKFTTTVAEPALLTETLGLFLE NGGYDLHLRQLKKRYQQQIDTIKSYICRYFPVGTRVSRPQAGFILWLELPESIDTLELFH QAMDEKILCMPGILCSADKRFSHCLRIAACFELNPKMLNALMRLGELAKNMLPVQKAIDQ ILTNSVG >gi|333032502|gb|GL891924.1| GENE 67 66490 - 67860 1214 456 aa, chain + ## HITS:1 COG:PM0233 KEGG:ns NR:ns ## COG: PM0233 COG0826 # Protein_GI_number: 15602098 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Pasteurella multocida # 4 443 7 456 456 619 66.0 1e-177 MKTELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNAFDHENLKIGIDEAHALGKK FYVVVNIQPHNSKLKNFIRDLEPIVAMQPDALIMSDPGLIMMVREHFPEIQIHLSVQANA INWATVKFWKDYGLSRVILSRELSLEEIEEIQQHVPDIELEVFVHGALCMAYSGRCLLSG YMNKRDANQGACTNACRWDYKLHEAQEDLNGDVIPVTQLNTPEKSCCSSGQSETTSVQTL LVQRNDEEMFAAEEDEHGTYFMNSKDLRAVQHVDRLTKMGIASLKIEGRTKSYFYCARTA QIYRKAIDDALAGKPFDPRLMTQLEGLANRGYTEGFLRRHVHSEYQNYADGSSHFDYQQF CGEVVERHGNYIRIEVKNRFVVGDSLELMTPQGNITFNLTEMRDLKGNPITDAKGSGHFV EIPLSQDVDISYALLIRNLPHAKESITASTLAYSAS >gi|333032502|gb|GL891924.1| GENE 68 67863 - 68126 143 87 aa, chain + ## HITS:1 COG:YPO2927 KEGG:ns NR:ns ## COG: YPO2927 COG1145 # Protein_GI_number: 16123114 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Yersinia pestis # 1 80 1 81 86 98 62.0 3e-21 MALLITNDCINCDMCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKVVCPIDCIK QDPVHIENKEQLLEKFKDLNLIGSFSF >gi|333032502|gb|GL891924.1| GENE 69 68363 - 68692 412 109 aa, chain + ## HITS:1 COG:BMEI1045 KEGG:ns NR:ns ## COG: BMEI1045 COG2076 # Protein_GI_number: 17987328 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Brucella melitensis # 3 108 4 109 110 97 55.0 5e-21 MSYLYLAIAIACEVIATSALKASQGFTVPIPSIITVVGYAVAFYLLSLTLKTIPIGIAYA IWSGAGIILISAIGWIFYKQHLDLAACIGLALMIAGIVIINVFSKNTHL >gi|333032502|gb|GL891924.1| GENE 70 68764 - 69540 607 258 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 253 4 239 245 238 51 1e-61 MEQVAKLVIRDLHKTFGDHEVLKGISLDANAGDVISIIGSSGSGKSTLLRCINFLEQPSN GTIKLNGEKLRTVFDKKGNLKVVEPKQLQKMRTQLMMVFQHFNLWSHMTVLENVIEGPIH VLGVKCSEAEERARKYLRKVGLPESVESKYPAFLSGGQQQRVAIARALAMEPEVMLFDEP TSALDPELVGEVLKVMQGLAEEGRTMIVVTHEMGFARHVSNQVIFLHQGKIEEQGHPDEV LNNPKSERLKQFLTGSLK >gi|333032502|gb|GL891924.1| GENE 71 69550 - 70263 603 237 aa, chain - ## HITS:1 COG:PA2925 KEGG:ns NR:ns ## COG: PA2925 COG4160 # Protein_GI_number: 15598121 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine/histidine transport system, permease component # Organism: Pseudomonas aeruginosa # 1 237 1 237 237 309 64.0 3e-84 MIEILRQYWQSYLWTDGLQMTGVAMTAWLLVLSIGIGFVLAVPLSLARVSENIWLRGPVW LFTYVFRGTPLYIQLLIIYSGIYSFDYIHEHQTLDAFFREGINCTILAFALNTGAYTTEI FTGAIRSIPHGEIEAAQAFGMSKWKLYTRIIIPSMLRRALPFYGNEVILMLHATTIAFTA TVPDILKIARDVNAATYDTFSAFGIAAVLYAVLAFILIWIFRKLEKRWLAFLKPSNH >gi|333032502|gb|GL891924.1| GENE 72 70260 - 70949 570 229 aa, chain - ## HITS:1 COG:PA2924 KEGG:ns NR:ns ## COG: PA2924 COG4215 # Protein_GI_number: 15598120 # Func_class: E Amino acid transport and metabolism # Function: ABC-type arginine transport system, permease component # Organism: Pseudomonas aeruginosa # 1 226 1 226 229 283 66.0 3e-76 MSFSGYGPLLLSGTWMTIQLALLSLLLSVIIGLIGASSKLSNIKALRYIATAYTTLIRSV PDLVIMLLLFYSLQLGLNQITEALQMDQIDINPFVAGVITLAFIYGAYFTETFRGAFQSV PRGQIEAAMAYGMTPWQVFHRVLFPQMMRFALPGIGNNWQVLIKATALVSIIGLTDIVKI TQDAGRSTMQLFFFSIVAAAIYLAITTVSNLILIWLERHYSAGVRKGQL >gi|333032502|gb|GL891924.1| GENE 73 71041 - 71826 955 261 aa, chain - ## HITS:1 COG:PA2923 KEGG:ns NR:ns ## COG: PA2923 COG0834 # Protein_GI_number: 15598119 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Pseudomonas aeruginosa # 27 261 22 258 261 265 51.0 9e-71 MASFMKKIFVSTTLVLAAVATNVQAKDWKVIRFGTESSYAPFEYKTPDGKLTGFDVDLGN AICAKLKAKCVWVENSFDGMIPALKAKKFDGILSSMTVTDERAKQILFSSKIYNTPTRMV AKKGSPLLPTPTSLKGKRVGVQQGTIQETYAKTYWAPKGVSVVPYPTQDLIYQDMMSGRL DATLQDAIMVDGAFLKQPKGKNFSFAGGNVVDVKTLGVGAAIGLRKEDADLKANIDKALA AIIADGTYKKLEKKYFSFSIY >gi|333032502|gb|GL891924.1| GENE 74 72001 - 73032 922 343 aa, chain - ## HITS:1 COG:RSp1110 KEGG:ns NR:ns ## COG: RSp1110 COG0583 # Protein_GI_number: 17549331 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 301 1 300 315 342 55.0 5e-94 MDLFHAMRVFNKVVETNSFSLAADSLGLPRASVTTTIQALEKHLQVRLLNRTTRKISLTP DGAVYYDRTARILADVADIESSFHDAERGPRGQLRIDVPVSIGRLILIPRLRDFHARYPD IDLVIGLNDRPVDLVGEAVDCAIRVGELKDSSLIARRIGTFQCATAASPIYLEKYGEPTS IEDLQKNHKAIHFFSSRTGRNFDWDFVVDDLIKSVSVRGRVSVNDGDAYIDLALQGFGII QGPRYMLTNHLESGLLKEVLPQWTPAPMPISAVYLQNRHLSLKVKVFVDWVAELFAGCPL LGGTALPFDQKCEFACDKETGHEYTIRTLVEQHNIAEAYTLKT >gi|333032502|gb|GL891924.1| GENE 75 73011 - 73184 134 57 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02503 NR:ns ## KEGG: ACICU_02503 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 57 1 57 57 106 100.0 3e-22 MVRMGETGFMEWTEHKSLSITNKYIKFDNTIRIFITIDVFALENALIGVCVWIYFMP >gi|333032502|gb|GL891924.1| GENE 76 73230 - 74450 1506 406 aa, chain + ## HITS:1 COG:RSp1112 KEGG:ns NR:ns ## COG: RSp1112 COG0845 # Protein_GI_number: 17549333 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Ralstonia solanacearum # 46 394 44 395 438 393 59.0 1e-109 MSFSRKQFALSAIFVAILATGGSFMLLHENADAKAAPTAAQQAATVDVAPVVSKTITDWQ EYSGRLEAIDQVDIRPQVSGKLIAVHFKDGSLVKKGDLLFTIDPRPFEAELNRAKAQLAS AEAQVTYTASNLSRIQRLIQSNAVSRQELDLAENDARSANANLQAARAAVQSARLNLEYT RITAPVSGRISRAEVTVGNVVSAGNGAQVLTSLVSVSRLYASFDVDEQTYLKYISNQRNS AQVPVYMGLANETGFTREGTINSIDNNLNTTSGTIRVRATFDNPNGVLLPGLYARIRLGG GQPRPAILISPTAVGVDQDKRFVVVVDAKNQTAYREVKLGAQQDGLQIVNSGLQAGDRIV VNGLQRIRPGDPVTPHLVPMPNSQITASATPPQPQPTDKTSTPAKG >gi|333032502|gb|GL891924.1| GENE 77 74457 - 77636 3501 1059 aa, chain + ## HITS:1 COG:RSp1113 KEGG:ns NR:ns ## COG: RSp1113 COG0841 # Protein_GI_number: 17549334 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Ralstonia solanacearum # 1 1056 1 1055 1069 1491 78.0 0 MNISKFFIDRPIFAGVLSVLILLAGLLSVFQLPISEYPEVVPPSVVVRAQYPGANPKVIA ETVASPLEESINGVEDMLYMQSQANSDGNLTITVNFKLGIDPDKAQQLVQNRVSQAMPRL PEDVQRLGVTTLKSSPTLTMVVHLTSPDNRYDMTYLRNYAVLNVKDRLARLQGVGEVGLF GSGDYAMRVWLDPQKVAQRNLTATEIVNAIREQNIQVAAGTIGASPSNSPLQLSVNAQGR LTTEQEFADIILKTAPDGAVTRLGDVARVELAASQYGLRSLLDNKQAVAIPIFQAPGANA LQVSDQVRSTMKELSKDFPSSIKYDIVYDPTQFVRASIKAVVHTLLEAIALVVVVVILFL QTWRASIIPLLAVPVSIIGTFALMLAFGYSINALSLFGMVLAIGIVVDDAIVVVENVERN IEAGLNPREATYRAMREVSGPIIAIALTLVAVFVPLAFMTGLTGQFYKQFAMTIAISTVI SAFNSLTLSPALAALLLKGHDAKPDALTRIMNRLFGRFFALFNRVFSRASDRYSQGVSRV ISHKASAMGVYAALLGLTVGISYIVPGGFVPAQDKQYLISFAQLPNGASLDRTEAVIRKM SDTALKQPGVESAVAFPGLSINGFTNSSSAGIVFVTLKPFDERKAKDLSANAIAGALNQK YSAIQDAYIAVFPPPPVMGLGTMGGFKLQLEDRGALGYSALNDAAQNFMKAAQSAPELGP MFSSYQINVPQLNVDLDRVKAKQQGVAVTDVFNTMQIYLGSQYVNDFNRFGRVYQVRAQA DAPFRANPEDILQLKTRNSAGQMVPLSSLVNVTQTYGPEMVVRYNGYTSADINGGPAPGY SSSQAEAAVERIAAQTLPRGIKFEWTDLTYQKILAGNAGLWVFPISVLLVFLVLAAQYES LTLPLAVILIVPMGILAALTGVWLTAGDNNIFTQIGLMVLVGLACKNAILIVEFARELEM QGATAFKAAVEASRLRLRPILMTSIAFIMGVVPLVTSTGAGSEMRHAMGVAVFFGMIGVT FFGLFLTPAFYVLIRTLNSKHKLHSAAVHEAPLASPHDH >gi|333032502|gb|GL891924.1| GENE 78 77649 - 79097 477 482 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157165073|ref|YP_001466086.1| 30S ribosomal protein S12 [Campylobacter concisus 13826] # 13 480 8 456 460 188 27 2e-46 MITSKQNWLLSSLMGSLLLAGCSLAPEYQPAKVIVPVKFKESDPKLEDNNWKIAQPADQQ TRGEWWRIYNDAQLNELEQQAIAGNQNLKAVAANIQASRALRSAAQAERLPSIDAGFGPT RQKPSPASLGLDDNAHTSAQTLWRAQANVSYELDLFGRVASSVNAATADLQQQEALYQSA LLALQADVAQGYFLIRQLDTEQAIYNRTIKLLGETRDLMQLRFKNGLGSELDVSRAQTEL ATAQTTALNIARNRASAEHALAVLLGKPPADFNLAVQPLTANSIRLPAGLPSTLLERRPD IAAAERAMAADNARIGIARAAFFPKLSLTGALGYESSSLSELGKWSSRTFLLGPVAGTIL SLPLFDGGQRKAGVAQARAAYEESVANYRQTVLNAFREVENGLSDQRILDQQIQAQNQAL SSSRHANQLSHLRYREGAISYLDVIDSDRTILQQEQLAAQLKGSQIIASINLIRALGGGW SS >gi|333032502|gb|GL891924.1| GENE 79 79138 - 80391 1586 417 aa, chain - ## HITS:1 COG:PA4602 KEGG:ns NR:ns ## COG: PA4602 COG0112 # Protein_GI_number: 15599798 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Pseudomonas aeruginosa # 1 416 1 416 417 657 78.0 0 MFANISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPG KRYYGGCEFVDVIEQMAIDRAKELFGADYANVQPHAGSQANSAVYLALLNPGDTVLGMSL AHGGHLTHGAKVSFSGKTYNAVQYGLNAETGEIDYEEVERLALEHKPRMIVAGFSAYSRV VDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVQIADVTTTTTHKTLRGPRSGLIL AKANEEIEKKLQSAVFPGNQGGPLMHAIAAKAICFKEAMSDDFKAYQQQVVKNAQAMAEV FIARGYDVVSGGTDNHLFLLSLIKQDVTGKDADAWLGAAHITVNKNSVPNDPRSPFVTSG IRIGTPAVTTRGFGEAEVRELAGWIADVIDSKGDEKVIADVKAKVEAVCAKFPVYAK >gi|333032502|gb|GL891924.1| GENE 80 80551 - 81378 666 275 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02508 NR:ns ## KEGG: ACICU_02508 # Name: not_defined # Def: putative cytoplasmic protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 275 1 275 275 542 100.0 1e-153 MGLLDKFWFKKKHIRTDQQATDQALEIPEDWNIYICQIDEQPASYFLNLALTQIAPLTSK PILLWLEIQMNHSREDGLSSNEEFDQLIEIEDQITLSLATHPILYAGRLTHNHLRDFYFY CEDGLDVNHIIHQVMQSYPNYNYRFGQKSDPNWSTYFDYMYPSPEIMQIISNNAVIENLE KHGDSLEIARPVDHWIYFKNKSDQAIFLELIKPLGFEIVQQNEIKDRTDSPYQLQISRID HVNHHAIDTCTLQLWKFAQQVNAEYDGWETQVIRN >gi|333032502|gb|GL891924.1| GENE 81 81438 - 82667 1395 409 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02509 NR:ns ## KEGG: ACICU_02509 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 409 1 409 409 753 100.0 0 MKMKLLMTSVLSTSLFLVACGGGSSDDGPATTNPSGTPTNNIQNPVVKVEAYTSTNLGSV AAESSILTYKMLGQSGQEVQATSLVFTPNTQPPVGGWPIVVWAHGTTGVADVCAPSKAAL ADSTKDLISKLLAAGYVVVAPDYEGLGTPGIHPFLNVKSEAFSITDAVVATRNYLSQRNL LTSKKWVTVGHSQGGHAALGAAQYASRAQLDYKGTVAVAPASNLGSILLNGELKAASASV YEKKAIYAQLDAFTALVVAGIRNTHPDFNYLQVFTESTARIAQGAEGFCYEPLLGDFSAT MQVYIATHGETLDGYTRTQPNFMAVPLVKTFLDKDSQPLQVKVTTPIIIYQGLADSTVPK LATDLLISNATTVGTKINSYVTGNWDHGTAMSSNVDNIVADVKTLMPPQ >gi|333032502|gb|GL891924.1| GENE 82 82917 - 83603 658 228 aa, chain + ## HITS:1 COG:STM1878 KEGG:ns NR:ns ## COG: STM1878 COG0847 # Protein_GI_number: 16765220 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 5 225 4 214 232 66 27.0 3e-11 MQAIILDTETHTLNGLPIEIAYAPIEINAGKLTLDKSKLFDQLYQVGTPISYAAMAVHHI LESDLENQPHYKTFKLPDTTTYIIGHNIDYDIAAIARCGVDVSHIKPICTLALARKTWPD AEAHNISALIYMISQGSSKARELLKGAHRADADIILTANILMHIVYHLNIHDIEELYRVS EEARIPTTINFGKHKGTAIAELPKDYIQWLLRQDELDVYLRKALESAF >gi|333032502|gb|GL891924.1| GENE 83 83751 - 84383 516 210 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001132 NR:ns ## KEGG: ABBFA_001132 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 210 18 227 227 348 99.0 6e-95 MAGFYRTNLGRVALQQRNIALNAKQRRLLLLIDHEDFQSLNTEFKKRIAPPELIQQLIDL KLIAPISENDSEFTEQIALSVPPTTSLEVKAQQKSTIDENESADLTGEIKVSLEPSCHSS NIENTQPPIPVQQLTFEEIQLLMKQSLSQYCGLMAKPLIQKIEQIKNLQELKMCQMQWIT SLQESRIPPHELAHTLHSINYSIQLIQQKN >gi|333032502|gb|GL891924.1| GENE 84 84634 - 84831 95 65 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1275 NR:ns ## KEGG: ABAYE1275 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 64 7 70 70 125 96.0 7e-28 MSQVMIMVSEAGRMENTCNLPADLDKNGNVLKIYDYSLKELPINLDGTVTYNGKRWTFDK KQNYL >gi|333032502|gb|GL891924.1| GENE 85 84956 - 85510 466 184 aa, chain - ## HITS:1 COG:STM2612 KEGG:ns NR:ns ## COG: STM2612 COG3772 # Protein_GI_number: 16765933 # Func_class: R General function prediction only # Function: Phage-related lysozyme (muraminidase) # Organism: Salmonella typhimurium LT2 # 41 182 5 149 150 135 53.0 5e-32 MTTKPFFDAARVIAGGKLTQAQVDDLNKVVEKLAPGGKTTSDVGVDLISGFEGTRFKAYD DGVGVWTIGTGTTIYPNGVKVKKGDTCTPEQAKAYFKHDLAKFEKTVNESVTVPLTQNQF DALVSLTYNIGSGAFNNSTLLKKLNKGDYKGAADQFLVWNKAGGKVMKGLVRRREAERAL FLKK >gi|333032502|gb|GL891924.1| GENE 86 85500 - 85718 280 72 aa, chain - ## HITS:1 COG:no KEGG:AB57_2672 NR:ns ## KEGG: AB57_2672 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 72 1 72 72 126 100.0 3e-28 MNSENTRAYLAFALVGLMFVLVIALFFVDMPRENSNLINTALGFIAGAMTTACGFYFGSS ELEKKKGESNDN >gi|333032502|gb|GL891924.1| GENE 87 85715 - 86002 268 95 aa, chain - ## HITS:1 COG:no KEGG:AB57_2673 NR:ns ## KEGG: AB57_2673 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 95 24 118 118 169 97.0 3e-41 MLSDHVTRLTFINEAHKETSEQNKKDIDTLDIKVANLENRTASQDGGLSVLRVLLGIFAG IVFSLCAWVGSSIIQLSQDQSLIKEKVSRLEEAGR >gi|333032502|gb|GL891924.1| GENE 88 86147 - 86755 277 202 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875207|ref|ZP_08443040.1| ## NR: gi|332875207|ref|ZP_08443040.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 202 119 320 320 316 100.0 5e-85 MNYYFIVMLTSAERLKFSFIFLALALLINSNKKIIMFGLALMTHVQTILLMAPYYIGQFF DKSESKFLKILMILGFMAVSGATFFVLQEHIESKFTSYSNSVDEDGLGIIGSIKTSVFII LAVATTRKLLPLICGLPLIVMAFFLGSDRIGMLAFILYAGVVIYYKRRMDVVLFIVMIYF VYKSSEFISNILEYGTGYHFIN >gi|333032502|gb|GL891924.1| GENE 89 87219 - 89720 1814 833 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1272 NR:ns ## KEGG: ABAYE1272 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 131 1 133 860 111 48.0 2e-22 MSVPAQTPSKEYIANGTTTAFPLEFNCDKAEYLIVTLNGEDAPVGSWTLANDTVTFNVAP LNGVVVNLERNTPFQRTTNYQLYDNSFRPSAVNKDFDLIWWKLQELGYRDQVIWLALVKE IADRIAGDDNLQNQINTIDEWLDNLQQNVNENTNDIAQLVTDLSKEIADRIQGDQILKDM FLSMIDEAINEGTINALAITHLDSLEALEGVTNVWDGRTIYVKGIGNYVYNALTSSWEVG GNSTEATLDQTGETQQQLNDASIHTVGSVAEMLALNEKFRPRTIRIKATGAMYIYDASQA SINDGFYILNGWVLVGFHDRLLATLAGLKGDGSNEYTKLKALIDVSSSLNLPIDLCRLNI STSNLVASGHLKFIGTGGIKLFAGSNGTLLTSDYDIVIDGDIELDQNKASNSGGTVGSET HCTIKHTGDNLILKGAKIKPSASINVVTRAKKKVLSQDTDIDGGMITFYAISPTAKVEVL GGEYKNAHLYDNIQILNGGDVVVERVRSKDSKRSCIVIGNSTGKARIFGNYTSGAKTDGA NQGGWGIVASVNSQDSVIGMNVCLNNQRGPMTVDTYPDSGPSVDNRISVFGNILGGKYND AYATTGLGLNNVKHGNVTGNIIFSANQGILAVDSDHTLVHGNTIMDTVDFAFQGYLSPNI TFKSNTVDGCTASGQAVIRFIDSTGFRCSGNTYRNLTGAASILYRVSGNTKDWIISEDDC LKLTAGSGYVFQILGAGVTGGKIRRNNYKADGVTGWQWYILSNNLAQFSTHDNEIESAGT SYISSGANVTAGDDTVNGSRNVWSAAPTAFKSRTGQVAAIAGVLKHWNGTTWA >gi|333032502|gb|GL891924.1| GENE 90 89730 - 91406 1157 558 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1271 NR:ns ## KEGG: ABAYE1271 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 557 1 557 558 1143 99.0 0 MTKPKISFLAFFLIWADIQGWKVPDFHALVCIFLENFYIKGRTALLMMPRGHSKSTILDV FNAWVIYCWPETQILHQGTTDDDAYKCSNGTKLVLEKHPLCVDNPEVKRKKGETERWWVA GTDDVRYGTMLAKGILSGVTGHRAHFIQNDDVETPKTTGSPEAREKLTYRLSEQTHIAFP GAKKLWIGTPHSHDSLYDKIKKLRKVDILVLKMFENEKRIENALAGGKYLLDFEPIHAFA GIGQGAKYLSKGQDYTLKKVNDLYEVTLAQDHYIADFYSEGIWAERFDAEEMASRREECK TLNEWDSQYQMHAKPIGDVRLDPDKIIAYNCEPVLKRANRTTMFMIGERQIVGATFRWDP SSGKLKSDISSTALVFHDDIGNKYWHRSIALKGEVIETDADGRVIGGQVWQLCNIIKEFH LSKVTIETNGIGNFAPAALKAALKTRGIRCGVTEQHSTKSKNKRILDGIEGPLISGLLWA HVSVLEDENGEDSAQVKQMREFNPAITDQPDDYLDSLAGAIVEAPERVGKSLNQTDYEET PNWRTNGGVHEAALDFEN >gi|333032502|gb|GL891924.1| GENE 91 91406 - 91714 313 102 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1270 NR:ns ## KEGG: ABAYE1270 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 102 1 102 102 164 97.0 2e-39 MRDDQTKELEELTEKMTDDLIKIAYAASECGFETPEDRGNKVWLYKGLNQCASAITKVEQ VLAYRRGTLPPASTDEDTQKKHEQNLIKKAEAEAEKIRQRMS >gi|333032502|gb|GL891924.1| GENE 92 91859 - 92002 248 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875211|ref|ZP_08443044.1| ## NR: gi|332875211|ref|ZP_08443044.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 47 1 47 47 73 100.0 3e-12 MKTLILAAILALPATMTFAGSCDHSWQSAKDGSSCGDRAADRRAGGR >gi|333032502|gb|GL891924.1| GENE 93 92038 - 94563 2404 841 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1268 NR:ns ## KEGG: ABAYE1268 # Name: not_defined # Def: phage related protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 841 1 841 841 1482 90.0 0 MKEQCKQAVAKALGKQSLTAQEATDIEARINETMRNLARKDINNWRNLSDAEKLSEAAKQ VAIDIQEQLKRKHKIAAQDILKQSQNIAALDHSKLSSMEVIDRMVAAHGDMSGIQSIDSK ARGIASIYRGELVDFYTNIKGGLGIFTDQELVQKIVRERFGENTGDALAKKISDKMGDVF ETMRDRFNRNGGDIGKLDNWGLPQTHNLEKIAKAGKEAWVNKAESLIDTRQYVHENGDYY SQQEIRSLLEYTYDTLSSDGANKIEVGRQATGGGTSKVTNRHGESRVLHFKDAESWLEYQ SEFGGMQFVDLVEAHINGLSKDIAMVENLGSNPKTALKILMDAAAKKDWEKGIDENKTQS SRKRAQVMFDEFSGGNTPQSQVLANLGIAYRSMNVASMLGGTTIASLADQATIAKTAHVH NLSYRKAFGGIVEQLNPANKADREFAHGLGLATEEMLGSIARWSDDGLTSTYGKSEKLAR ISSGVATQVMRVSFLNALTSASKVGFTKLLMEKYGRLSRSKAWNELDVQDRELLSNTGLD ERAWQVFQLAEPVVDRKGNQLMSARSIYEIPDEKLTAFGDPKQVKDQVASQLQAHLLDEQ GMAVIEAGLRERTWMTVGAKGTITGEVFKGLMQFKSFSASFLMRQGSRAMAQEGLKGKAA YAIPLMVSMTLLGGLVVQLREILNGNDPQTIYDSNDPKKATSFFMRSLVAGGGLPVLGDI LVAGTDTSGRDANSFVSGPLGSDFTALLGLTVGNLTQYNEGKDTNFGNEAFKFVKGKIPA QNLWYTKAAINRMFFDEVQDTIAPGYREKALRKAERQQDRERFWGDDINDIRAPDFERIV K >gi|333032502|gb|GL891924.1| GENE 94 94567 - 97440 3030 957 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1266 NR:ns ## KEGG: ABAYE1266 # Name: not_defined # Def: phage-like protein # Organism: A.baumannii_AYE # Pathway: not_defined # 4 955 3 954 954 1711 95.0 0 MSNWLSDLSSENQQDFEKLNSQGLQHPDTRPNDPGVFDGAISSPFRGMAIGLNKVGDAIS APIDAVVDRVSYSLKDVSTNEFIEPYEEFKAKREKARDNLVYGTIADLEDKDNTGIVGNI GVGVGDYLWRGALGVATGGTLGAATLTGGSTGNYVYTDLTRKGVDENTALKVAGVNAVGD AIGTALPIGYGFKGTGGLVADAALSVGGATGLNTGMQYASEQLLKSNGYDKQAKQYEVTG ESVATDLLINSLMFGGARYLGSKQNQLDQDVDAEINQLNSDDFETRNDALNDALVKNSFE FEDTTLPVQTTDPVQQNKHYQNLDVATEQILKGQPVSVPNTVQGEPRRNTIDYATSSLPT NAKQIALRAKQDGIDPSVALTISHIETGGKFNHTAQNPTSSAYGLFQVLDDSWKNLGGKD RNNVDEQIRIGLKHIKQANNYIRKNLGRDPVAHEQYLGHLLGPGGAVKVLKADPSRPLID VVRSYDAKNADAIVKNNGMSGMTVGEAINKWRNKWNQLSSRYGGETSTAYGMDGSSYDFA YEVKDWTDLVASNDQLYGVNPLYPSELQPRDRTREASRQQIERMADDLKPELLGESYKLS DGAPIIGPDNVVESGNGRTLAIGRAYDNGRADAYREFVQNWANSRGMDISGLNQPVLVRT RLSDVDRVAFSRLANESDVAQFSATERAMSDVDRLPDSTLLKINNDGSINIDGSMDYVRS FVDQLPQSERGSVITSDGRLSQEGKRRIESAIVQRAYGDSNLVTRLSENLDDDSKNVLNA LLRAAPQLSQLNDLVKQGGRFENTISQDLAQAAQKLTDLKANGLQVRDYLNQGQLIDDGL SDGARRFLEVFDNNRKSAKAISESISSEIQTIENMGDPRQGSLFGETPEEKAALDVIFSN PDQPIAVSRINSMGEPEEFTMTLRDYHAELEAEIKQSEQDILAAQTALNCALQFGAA >gi|333032502|gb|GL891924.1| GENE 95 97440 - 99482 1780 680 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1265 NR:ns ## KEGG: ABAYE1265 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 680 4 683 683 970 82.0 0 MRIPISRGREAPQAQMQSFTPNTGLAEIGRSIGGAIQARDDQQRQQEVTAKNLELFNNQL AEKEGKLKLDESLSTDFNDKVVDIKNRLGNGVITTKQADEELNTWSNAKFSELQNSLPGH AQEDLKKYWDSNVTRQRTSFLPLQLRADEQKGGVLADRFFDVATRMDREAGKEYLLKNIV GLPLSEAQKSELTNKYETTRDITDINSRITTAIAQNSVEGLQEVATGLKDYKFINGQAVQ KFQTEIQSKITTLHQRQQVQENKRINEAEKVLNEYKQNVLTGRPMDLTYQTNVEKAVKGT PSETEYNFYTKQSSDFLRFQKLSTDQQLAEINKRKANMKNSSSADAVAENKILATYQSIY DNKLKTAKENPTQALREKGIELPEVNPLTLKVNPSAFAKNIVTIGSYQVAQRDKDPNATI KPIPNEALPAAKQAWEEATVDQKLNLISSMIAQTKGIKNGAKIWGEALGQLGNGDAAYQM AGYARANNFRSDAGLDVATAIVAGKQALKNKQMIQPKDALLKEKFNKYVGQSVSGETANL NYAAFQAIYAYLTEARGQTHKDADEYKEEIGRTALGLATGGVYTQSGRFKDYTDRGISDW KVSKPYGMTDATFEAKIQKGYADISKATGMSVNDLDNFRLARSPTKAANGDLMYDLINER GRPLVVKGNVWRIRMNGVDK >gi|333032502|gb|GL891924.1| GENE 96 99482 - 99877 540 131 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1264 NR:ns ## KEGG: ABAYE1264 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 131 1 131 131 173 98.0 3e-42 MCKGGAISSGLEAVGNISNALMADATAKGNAKTIQSVSKVQSKKIKEQGQRDASSAMAAA AENGLDVNVGAPVVISDEIISDASYNALLNQMQAGYAAADVRRQGKAQRNNYGMKAASNI IDSAAQAYGWK >gi|333032502|gb|GL891924.1| GENE 97 99889 - 100074 135 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875216|ref|ZP_08443049.1| ## NR: gi|332875216|ref|ZP_08443049.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 61 1 61 61 96 100.0 7e-19 MCGALSVSREALETSGLSSRKRPIQKPKDEPKKESFKSSGYDAVDAQLKTAQSIIIYSSL F >gi|333032502|gb|GL891924.1| GENE 98 100078 - 100530 452 150 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1263 NR:ns ## KEGG: ABAYE1263 # Name: not_defined # Def: phage related acetyltransferase # Organism: A.baumannii_AYE # Pathway: not_defined # 1 150 5 154 154 300 99.0 1e-80 MQVRAANLNDLDTLVDFGKRLTKESPIFSKQGFDEQSASDLFEYLIKKHNSIFLALDEYQ NPVGTVIGVIETDWRTGHKLAFEQGVYVLPEYRKSNIAKLLVNTFIGWAQLKNADRIQIG TMTGIHADKTVKLYESLGFNLIGYVLEMEV >gi|333032502|gb|GL891924.1| GENE 99 100532 - 102610 1450 692 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1262 NR:ns ## KEGG: ABAYE1262 # Name: not_defined # Def: phage-like protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 692 6 697 697 1371 97.0 0 MRQWILKNNLSSGELSPLLWTRTDIQQYANGAKKLLNALPLVEGGAKKRPGTKFRSIFAG ALRLIPFIANSENTYLLILGVSFLKVYNPRTYAVVYEAVTPYNTAQKVREVQYAHTKYRM YFVQGDTPVQRLLCSADFTNWQFAAFTFGVNPNDELGSTPNVALSPSGTEVGKVISLTAS SFPNWSNTETYLTGDRVIHTSKTWRATIDNKGVEPSATTSEWEEVTNEAANVFTPSSVGS IVEINGGQVKITQYVDPSRVNGEVLVKLTSTVQAIAKSWVLKSIAFSATAGYPKAVCFFK QRLVFANTKTSPNQMWFSRIGDDGNFLETTQDADAFSIASSSAQSDNILHLSQRGGVVAL TGGAEFLINSQGPLTPASAQIDEHTSYGVQANVKPCRVGNELLFVQRGGERLRAMSYRYE VDGLVSPELSQIAPHIPENHAGIKELTFQQTPNSIVWIVMGDGAVSSITLNRDQEMNAWS QHDFGGQVLSICALPTGLGEDQCFMLTNRNGSTVLEEFSESAQSDCEFDINVTNGVGSIL NLDIQVLDNPLVNFNNADGYFYSTYTVSGTNINLSNTDLTQIVHLGQPFKTEIDLLPPDF SQVPTTAMFHKIQVHEMAIFLNASVGGYINGQELSTKYYNQSAFVNLPYTGYVLDSFVGW QSLHELEVKITHDKPMPLHMQSISMLVSINEK >gi|333032502|gb|GL891924.1| GENE 100 102610 - 103170 340 186 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1261 NR:ns ## KEGG: ABAYE1261 # Name: not_defined # Def: phage related protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 186 1 186 186 357 96.0 1e-97 MSVSKVTICNNALSMIGGQQIASFEEDSKLAQTCRNIYDTTRLSILRSHPWSCAKKRQIL SPISTYPSFGYAHAFPLPSDYVLIISANTEHYEVENRHILANAEVIHLEYVFDNDNEQTW DAMLVEAMTYKMASKLCKPITGSDAAGQSAEAQFQFLIKQARTVNGQERPSQDVQYAESS YYWERF >gi|333032502|gb|GL891924.1| GENE 101 103231 - 103629 485 132 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002544 NR:ns ## KEGG: ABBFA_002544 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 104 1 104 104 182 87.0 5e-45 MTKPVTEQELAEKAVAPRVTKADIDALMARVTYTVEQRPGGTTSTFVHAFLDGKFFLATG FSACVNAENFNADIGERMARGNAEKHAENKLWELEGYRLFTAQVQQNEKYCSDERPCVNC FADQGKCLDSPI >gi|333032502|gb|GL891924.1| GENE 102 103700 - 104599 781 299 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1259 NR:ns ## KEGG: ABAYE1259 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 299 1 299 299 580 98.0 1e-164 MANENKITAAFVIQYHDTYEIAAMQNESRLLKTAVNRGKIQGESFTINDMGQVEMSPSGN RFGDTTWTIPDAGVRTALMADYDLFIPIESRDLPKLKAVPTDKYMKNLINARNRKIDDII YQALVGGVTRTTVNDAGVKSTGTVNLPAGQIILSGYGTLKQQIIKAKSIFRANECDEHNG ETLNIIYTASMLEDILGDTTLTSADFMAVKMLQEGAVSGKWLGVNWIPYEKLNNGAGGAT EKRTVMYTSSAVHFGDADITGFDISKRPDKKNISQVGGVHSFAAGRANEQKVVAIDYLV >gi|333032502|gb|GL891924.1| GENE 103 104611 - 105234 611 207 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1258 NR:ns ## KEGG: ABAYE1258 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 207 1 207 207 292 96.0 6e-78 MLNEQQETNTENVQATEQTQTTPVDTATPPVESQTQEQKQPEAETETKPDIPESADAYKV ELEGFDFDAFKSNEDNKAFLESAHQAGLTNEQMSVVMKAYDQHTAVQVEALQQDWGNDYE ANLRFANQAIQAAGLQTTDVDSPTFGIRLAAYFGKALQEDMPPQNTQQSGAENIQELMAS EAYMNESHPDHKRVTAQVHSYYQKTYG >gi|333032502|gb|GL891924.1| GENE 104 105227 - 105712 327 161 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1257 NR:ns ## KEGG: ABAYE1257 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 161 1 161 161 262 94.0 4e-69 MINALFVVAVLAFIVAAAFALAYKVSGEEWQEKYWAENRLHLDTTIQLSKSQEELNKANS RIQQLEESLRNKEQKPEEVGTFVQHRALRPATPETYRVVFDLDLNGQRILEHLTQKYCRN AFSNTDRETNYKLGQQSVVAGIINEINKANDPNYSEVENDA >gi|333032502|gb|GL891924.1| GENE 105 105709 - 107352 1829 547 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1256 NR:ns ## KEGG: ABAYE1256 # Name: not_defined # Def: phage related protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 547 1 547 547 1057 98.0 0 MSELVARLCKRLSELKAARNRLEPHWSECYRYAAPERQQSFIGDDVTDTRKTQRAELLDS TLSEATQLLVSSIISGTTPANALWFKAVPNGVDDPAELTEGEKWLDEVCQFIWRNIHGAN YDSEIFDLVLDCVVAGWGVMYADVDRHAGGGYVFQTWDIGQCYLASTRQDQKVDTLYREY EMTMAALVNEYGENKVSEKVRNTYKSKPDCKVKVLWVVEPRKTGYIKGDRQLMPKEMPFA SYHVEVDEKIVLRETGYNEFPFVIPRFRKIPNSVYGTGQVSIALPDAKTANKLMRDTLRS AEISTLGMYAGVDDGTFNPRTVRLGGGKIIVVNDVNSLKRIDDGKGYQVGVDLLAHLQGA IRKKMMADQLQPADGPAMTATEVHVRVDLIRQQLGPLYGRWQAELLTPLLERTFGLAYRA GVIGEAPEEMQGRNLSFKFISALARSQQLEEVTAIERFLAGMSNVAQIDPSILDNVDMDA VAQVSGMGLGVPTAILRTQDQIDAIRKQRQEAQQQAAQQEQEQALAQPLANAVGKGLESE LTSETRQ >gi|333032502|gb|GL891924.1| GENE 106 107354 - 107584 367 76 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1255 NR:ns ## KEGG: ABAYE1255 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 76 1 76 76 82 97.0 4e-15 MCGGGLGKVLSSVTDMFGLTDTKGASKGFDAEAADAAAKNQAQLDANAATAERRKRNAST VLASATDNQKKTTLGG >gi|333032502|gb|GL891924.1| GENE 107 107584 - 107907 413 107 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1254 NR:ns ## KEGG: ABAYE1254 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 2 107 3 113 113 78 68.0 8e-14 MAAKREIKTPGVTAEPIQEETVEPALPKTTAEQAEESLDAINSGESEGEKEPSQEELLRQ ELEQMRAQLAELKKSTQPEAPSAAGVAQPKKRIPVLTEKGWSTKEAD >gi|333032502|gb|GL891924.1| GENE 108 107974 - 108153 201 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875227|ref|ZP_08443060.1| ## NR: gi|332875227|ref|ZP_08443060.1| hypothetical protein HMPREF0022_02693 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02693 [Acinetobacter baumannii 6014059] # 1 59 1 59 59 113 100.0 5e-24 MNIDEIKKNAPDGATHYLSKVYYRIICDLEVYVQNDNGEWVFLCHADNGMPANLINIVN >gi|333032502|gb|GL891924.1| GENE 109 108255 - 108464 146 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875228|ref|ZP_08443061.1| ## NR: gi|332875228|ref|ZP_08443061.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 69 1 69 69 120 100.0 4e-26 MNIYLVEDTSPFNLYDTYDSFVIACETEEEAKKHADTMSGMSSDDCAATLIGTALEGVSG VLLASFNAG >gi|333032502|gb|GL891924.1| GENE 110 108461 - 108847 225 128 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1251 NR:ns ## KEGG: ABAYE1251 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 26 128 56 147 149 99 58.0 5e-20 MDKPMTFIEWCASKGVIPYSLGIEAAYEAGQQSQQSKVEELKASHHGEVIGHEVHFKKIK QERDELQTLYTQQGINMLKLQKRVDVALKLIESWNEIAFDKTTHWTEGYEEGCYHCAAQL EQALKGEG >gi|333032502|gb|GL891924.1| GENE 111 108849 - 109124 171 91 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2738 NR:ns ## KEGG: ABAYE2738 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 90 12 101 102 79 50.0 7e-14 MSEFKVGDYVVHPKFSNKGLYKIYEMSGSITKVQLMPNGRKSYSFESDIRHATPEEIAAG HRIDKPSNSGELETLDKLENHISPNCKVEDV >gi|333032502|gb|GL891924.1| GENE 112 109117 - 109485 259 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875231|ref|ZP_08443064.1| ## NR: gi|332875231|ref|ZP_08443064.1| hypothetical protein HMPREF0022_02697 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02697 [Acinetobacter baumannii 6014059] # 1 122 1 122 122 240 100.0 2e-62 MKPEQFIREQGLDKAREVVEGAPSNAESFQDGYYFRTKPQFEFHNGIHEAWNLTDNDGEW FKKDGFDPVKINDLKMILESLRIVDQFGGIEKAKLVAKTKDGMGYLKGCIKDHESIYGAS HE >gi|333032502|gb|GL891924.1| GENE 113 109482 - 109643 180 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875232|ref|ZP_08443065.1| ## NR: gi|332875232|ref|ZP_08443065.1| hypothetical protein HMPREF0022_02698 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02698 [Acinetobacter baumannii 6014059] # 1 53 1 53 53 79 100.0 7e-14 MKGPKKLTQNEKDILLNEIRKMRDALWKKQNGIFKKNNLSIAIAMTRHDKEAV >gi|333032502|gb|GL891924.1| GENE 114 109640 - 110050 426 136 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1244 NR:ns ## KEGG: ABAYE1244 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 136 1 136 136 260 97.0 1e-68 MNMRVDSTAFTDNPRARARFLETKKKAKEFLRQRRGYKRPDFNRMILDLRNLGWSHEKIA YVLDVSGGSTVSSWSTGSIPEYIHGEQFIMLWQEQTGLDRVPREGEWQTYRYDIGQLDLL ETLDVFAAQLDEELQQ >gi|333032502|gb|GL891924.1| GENE 115 110062 - 110481 161 139 aa, chain - ## HITS:1 COG:no KEGG:Psyc_0994 NR:ns ## KEGG: Psyc_0994 # Name: not_defined # Def: hypothetical protein # Organism: P.arcticum # Pathway: not_defined # 29 139 2 114 114 123 54.0 2e-27 MRITEQQLEAIQNKRNNAQKGTLQSDKSKSDARVLGRLKQGAMNKTERKYNDYLESKRMK GEILWFKFDCINLRLAEKTFYKPDFFVLTSDFELQVHEVKGHWEDDALVKIKVAAELYPF SFKSVHWNTKNNAWDVRHF >gi|333032502|gb|GL891924.1| GENE 116 110627 - 111367 719 246 aa, chain - ## HITS:1 COG:STM1015 KEGG:ns NR:ns ## COG: STM1015 COG1484 # Protein_GI_number: 16764375 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Salmonella typhimurium LT2 # 52 242 52 239 249 92 31.0 8e-19 MNAMLNPEVIQGSGFCTKHNMKEIIMGGFQGCPQCAIEYVNAANKQHDFEVQKSVREKHF AGAMIPDRYKDAGFKNYRRDHDGQIEAYNLTTAYAREILKGEVKNLVMVGSTGTGKTHLA CATARTLLAKGNYARYITSEELAQRIMKAWDKDTKDQSEQSVIHEFTTYDLLILDEYGLH DREKRLELVHKVLYSRYDACKATMLISNMTLEQLKNDLGDRLWSRFQHGGLTTIECNWKD ARAVGK >gi|333032502|gb|GL891924.1| GENE 117 111364 - 111777 175 137 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1239 NR:ns ## KEGG: ABAYE1239 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 7 137 155 285 286 142 60.0 4e-33 MNRNQFSNETDNRYIEKNKNIKNTCSENPVDTVLKLWTPDLDSLNAWLQRSGITKMTQAE VDGWLLEINGYYSTKLEAGLLTDTQMYTNFVKWIKRNFSSRKPAQPQTSRNVNDAWANNP VQYTKTLEEAEIPEDWV >gi|333032502|gb|GL891924.1| GENE 118 111755 - 112258 279 167 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1012 NR:ns ## KEGG: ABSDF1012 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 14 145 24 158 346 141 57.0 9e-33 MSALIKFPRQHQVEKEKPMFSDKFDNGYIMSSRLYRKEVMPFLSDAARNVYAELENRING FQKETDFVSYSQLQGDKNLEGSRQLGRATVSSGLKELLDLGVISVIETGKQGTKSYRLNE ISLVDRFKNKTSSKKRPVQLVNQSSSVSEPKPVQGGGGSVSEPKPVQ >gi|333032502|gb|GL891924.1| GENE 119 112255 - 112722 179 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875240|ref|ZP_08443072.1| ## NR: gi|332875240|ref|ZP_08443072.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 155 1 155 155 317 100.0 2e-85 MNLAHTHEIGKHPSLSRDNSILEKLTLKEVVKINSQGHVFSQAFRKLLWLSSDKACAYCG DQIGTYEEMRVDHFLPKNTQNCEDINNYVSCCKTCNSIKGNKSVEEFRFRLAVYKSELRG IVSPGQAKQLVDLGVSLPISLPEFYFEKIAERECL >gi|333032502|gb|GL891924.1| GENE 120 113067 - 113285 168 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875242|ref|ZP_08443074.1| ## NR: gi|332875242|ref|ZP_08443074.1| putative regulatory protein cro [Acinetobacter baumannii 6014059] putative regulatory protein cro [Acinetobacter baumannii 6014059] # 1 72 1 72 72 119 100.0 6e-26 MLYLSLFTGVKKVQVLMKKSDAIQAFKTKVGVAKAIGISKQAVSLWGDMVPEGSASKLLL VNPNIPHTIKAA >gi|333032502|gb|GL891924.1| GENE 121 113361 - 114044 590 227 aa, chain + ## HITS:1 COG:ymfK KEGG:ns NR:ns ## COG: ymfK COG1974 # Protein_GI_number: 16129108 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli K12 # 68 227 66 221 224 72 33.0 7e-13 MSSLQERMHQAKKHYESTRNKKLKNTEMAEFCKVSKASVGQWFNGPTKELDGSNLTLAAE FLGVNHKWLAGERAPMLLDKKSDANVVFNNDEISKIPVLDYVQAGLFNSVGYDGVNPIGE TYTTYKSAKEKSVFSLTVQGDSMLPDFKPGDLLTIDTALMPQPGSFVVAQNGDYEATFKK YRVIGYDDFGREIFELVPLNPDYPTLSSLNHNISIIGVMVLHMRKYK >gi|333032502|gb|GL891924.1| GENE 122 114041 - 114682 336 213 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875244|ref|ZP_08443076.1| ## NR: gi|332875244|ref|ZP_08443076.1| hypothetical protein HMPREF0022_02709 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02709 [Acinetobacter baumannii 6014059] # 1 213 1 213 213 386 100.0 1e-106 MNGLNKIWEFGSKEPIQRIGILFLTVGIISLLSWVYKENLDLNQILNPEYFPQKRDGFFF HLFLYFLPIGFLLSWGYFLLLKIKRWVFYKKPSGEKLIFKDNLSAFSFATTIHKPLFEKN QMSFGIIQEVIHNNNSIQGFLVQLANSEGTTLVAGINDKYQNSLGKNDLVYWGFVSPSKE HFKFEASGYILALLEPEYDVDKKEWLIAKDLTK >gi|333032502|gb|GL891924.1| GENE 123 114885 - 115076 134 63 aa, chain + ## HITS:1 COG:no KEGG:AB57_3255 NR:ns ## KEGG: AB57_3255 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 63 1 63 63 107 98.0 1e-22 MNQRIEKYKFSQAFRDGSKAFVAFWIITFIAFAFLKGCADEQYANELKAKQNMYVRVQVE GAN >gi|333032502|gb|GL891924.1| GENE 124 115076 - 115441 221 121 aa, chain + ## HITS:1 COG:no KEGG:ECIAI39_2683 NR:ns ## KEGG: ECIAI39_2683 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_IAI39 # Pathway: not_defined # 16 120 10 115 115 63 46.0 2e-09 MSNNNEFLNITTNNVGEVKINGKSYFGRSVVVNGTSVTVDGNTVSGLEPNIKVEVLGSCE SVNTTSGDVHIKEAAQQVKTMSGDVTCGNVFGNVSTMSGDVKCGDISGSVSTMSGDILNK G >gi|333032502|gb|GL891924.1| GENE 125 115453 - 116256 809 267 aa, chain + ## HITS:1 COG:no KEGG:AB57_3257 NR:ns ## KEGG: AB57_3257 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 60 267 64 253 253 139 45.0 9e-32 MDNYKIKVKDEAESKEAQELFFELGLTKEDFDDYKFPYYVASYNDGAFSNYILGSDTSGW EELTLPQLRDLVVLKRGDVRDATHRDKLDESIYLTSDKVIYYWYGEWCKSAINKSNDYED YIANSLTSITQPQDPALISGADVPALIKKGESVQFRSVFNVQGGGEWQDLDLERDEEEFS LGDLINTRFEWRLKPQTIKVELELPKPFEPVEDCHVYILDDGKTDGYRRYSYEVHGDKGN TFIGIWRTEEEIKQVVEQLRKIRGTNS >gi|333032502|gb|GL891924.1| GENE 126 116253 - 116633 378 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875248|ref|ZP_08443080.1| ## NR: gi|332875248|ref|ZP_08443080.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 126 1 126 126 240 100.0 2e-62 MNMLALKPELLCPSFPYLDMSTDIQVEGETVYFDLTYGCNVLNCQIKAETTYDIREVTDQ FSGCARDQEYEVLVVDTKTHAVVTDKDGIESPIGLRFKLTDAQVNSLNEQLKYYAEELAD EEAGVV >gi|333032502|gb|GL891924.1| GENE 127 116633 - 116815 187 60 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1232 NR:ns ## KEGG: ABAYE1232 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 60 1 60 60 93 93.0 2e-18 MQVHEKRKLLEAIDVLIRRPASATETTLAEAMAYFKMLIEESTQGQIEVRYSDTTQQLPF >gi|333032502|gb|GL891924.1| GENE 128 116832 - 117683 753 283 aa, chain + ## HITS:1 COG:no KEGG:AB57_2735 NR:ns ## KEGG: AB57_2735 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 283 1 283 283 541 98.0 1e-152 MNAPVLVHNMSNAAYHAHSAVSSSQLKTILRSPAHFFAEHMSDKEHKQTPAMALGTAVHV LFLEPEVFNDEVAIEPIVNKRTNVGKEAIAKFLQNNANKAIITEEQYQAAAKAAEAMKRH PMYNMILSGGIREASIFFDDEETGLECRIRPDWHVAPETSEYFPNGLIVDIKKTTDARAN AFSRSCQNYDYSLSAAMYINGYKAYYGDEYNPSFLFFAVEEDDPHESIIYYASDEMLFIG EQKRRSAMLTLLQCKESNEWQGYTKQIQPIDLPLWAKKEFLGE >gi|333032502|gb|GL891924.1| GENE 129 117686 - 118585 967 299 aa, chain + ## HITS:1 COG:no KEGG:AB57_2736 NR:ns ## KEGG: AB57_2736 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 299 1 298 298 539 95.0 1e-152 MNMLATLNQGIVPQAETAANVLAAQAKAQVEARYMMAMHRPRNWDAVRQDLLKECRRPSF ADNTSTYYKKPVGGGSSVTGLGIRFVEVAIRCMTNILTETTMIFEDDHKEIHRVSVTDLE SNTTYPQDIKINKTVERKSSAGREVVSERLNSTGQKVFVVVATEDEMLNKRNAAISKAIR NAGLRIIPGDLQDEAEHLILQTRQSGIKEDPEKYRKQIVDSFNNIGVKAQNLVDYIGCPL DQCSPAQIDELRAVFGAIKNGETTWQTVMAEKNEQELSEGKKAPSNDINAVNQAIQQQG >gi|333032502|gb|GL891924.1| GENE 130 118844 - 119281 363 145 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1751 NR:ns ## KEGG: ABSDF1751 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 77 1 77 155 127 84.0 2e-28 MTDLNKEGKVNLSFEQDNGAVWVFADDSQFGTEISHLMMMHVDEYNEDELRVICHHAACE IDRLRAELEKAKAQAVPTWISVKDEEPPTDTMVLICWSDSPDVQPEIDYMTCDEDLNHIW ANFEIDPPTHWMYFHKVPSESGAEQ >gi|333032502|gb|GL891924.1| GENE 131 119278 - 119487 210 69 aa, chain + ## HITS:1 COG:no KEGG:AB57_2740 NR:ns ## KEGG: AB57_2740 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 69 1 69 69 123 100.0 3e-27 MSITLNGHQLKSLLEFVNPDGENDLDQLETELTIKFFEDGHSGKGYYFWMTEYPEEGSML LDVESGAEG >gi|333032502|gb|GL891924.1| GENE 132 119484 - 119675 68 63 aa, chain + ## HITS:1 COG:no KEGG:AOLE_07395 NR:ns ## KEGG: AOLE_07395 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 62 1 62 63 114 87.0 1e-24 MSEFNFEQLYLMALMNSKKPKYVLNWVHVSRHGPGATKATEICEYFGIDPEGTDFRKAES KEG >gi|333032502|gb|GL891924.1| GENE 133 119677 - 119946 214 89 aa, chain + ## HITS:1 COG:no KEGG:AB57_2743 NR:ns ## KEGG: AB57_2743 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 89 1 89 89 179 95.0 2e-44 MTAIANIGSNFVVALPPSEIWLNDLQAAEYLGYKDVHFKAAVCCLPTFPKPRYVIKCGQG RRWNLAELSNWLNEQSDDEPKKGRPRKRG >gi|333032502|gb|GL891924.1| GENE 134 119943 - 120929 701 328 aa, chain - ## HITS:1 COG:RSc1655 KEGG:ns NR:ns ## COG: RSc1655 COG0582 # Protein_GI_number: 17546374 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Ralstonia solanacearum # 1 327 1 333 334 241 43.0 9e-64 MASFRQRNNTWRAEISVNGIRESATFDTKAQARAWASKRETQLREQSHGKLPDHSFLEAI ERYLSEVSVKKKTHENEVKRMAFFKREYKKLCQKQLAKVTTDDLVQWRDSRLKAVQGATV RREANILASLFTVARKEWKWIKESPMADLTLPPPSKHRDRRITQDEIDRLCLAANWDNNV PVNSTQQIIIAFLFAIETAMRAGEIVGLTWDRVYLKDRYLVLTETKNGTKRNVPLSKRAV ELLTLLKGLDKKQVFTCNSQSFDTLWRKLRDRCQITDLHFHDTRHEACTRLARKLEVLDL ARMIGHKDLRSLMVYYNATASEIATRLD >gi|333032502|gb|GL891924.1| GENE 135 121227 - 122162 1570 311 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 1 311 1 311 311 609 100 1e-173 MTDALVLRDLSKTYRNGFQALKGINLTVPEGEFYALLGPNGAGKSTTIGIISSLTKKTSG TVEIFGHNLDTHPSLAKQQLGVVPQEFNFGQFEKAFDILVTQAGYYGIHRKIAEKRAEHY LEKLGLWEKRNIQARMLSGGMKRRLMIARAMMHEPKLLILDEPTAGVDIELRRSMWDFLT EMNENGTSIILTTHYLEEAEMLCRQIAIIDRGVIKEDTSMKSFLNQLSEESFIFDLAEPI APLQLNIIGVKFNLIDSSTLEVTMDKAHTLNDLFQLLESQGIRVRSMRNKSNRLEELFVK MVEKNLEGAAK >gi|333032502|gb|GL891924.1| GENE 136 122159 - 122932 710 257 aa, chain + ## HITS:1 COG:VC0590 KEGG:ns NR:ns ## COG: VC0590 COG0842 # Protein_GI_number: 15640611 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Vibrio cholerae # 9 256 8 255 256 293 64.0 2e-79 MNFNQLQIALWTLVRKEVRRFLRIWPQTLLPPAITMSLYFVIFGNLVGSRIGEMGGVSYM QFIVPGLIMMAVITNSYANVSSSFFSVKFQKSIEELIMSPVPLHIILWGYVIGGICRGVL VGAIVTAMSMFFTDLFIHNWFVTIYTVLITSVLFSLGGFINAVYAKSFDDISIIPTFVLT PLTYLGGVFYAISALGPFWQKLSLINPIVYMVNAFRFGILGHSDVNVSFSLIIVTLCCAV LYGIAYYLLARGSGMRE >gi|333032502|gb|GL891924.1| GENE 137 122929 - 123741 767 270 aa, chain + ## HITS:1 COG:HI1291_2 KEGG:ns NR:ns ## COG: HI1291_2 COG0780 # Protein_GI_number: 16273205 # Func_class: R General function prediction only # Function: Enzyme related to GTP cyclohydrolase I # Organism: Haemophilus influenzae # 126 270 1 144 144 147 53.0 3e-35 MSVEQSLLGKETQYPTSYQPDVLFPIARAQSREKYAHIEGITQGKDWWHVFEISWLNAHG IPQVAIGRITLPASSPNLIESKSLKLYFNSLNFTQFDSTQSFIETVEKDLSAAAGAKVEL TLFQVDDLEISKPQGICIDDLMPERLEQHPDATLLKLDESGEEIEVELYSHLLRSNCPVT GQPDWGTVFIRFKGKKPCYRSLLAYIISYRQHNGFHEQCVEQIFADIWQNLQPEKLMVYA TYTRRGGLDINPCRVSDLTWMPKPIRLARQ >gi|333032502|gb|GL891924.1| GENE 138 123765 - 124415 835 216 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001127 NR:ns ## KEGG: ABBFA_001127 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 216 1 216 216 409 100.0 1e-113 MPFFGFTPSEGLLNDIQTGIANKNSSEPLYPLRDKIALQLNEEIIENVLTQLVQHFPASE KRDTAEKLAGYVKSTVAVLLKQLLSKAPNDVVKQSVEFSEKSLFKDPQGQYKVGVALDAG LVTNLKHNFAELQAGNDINKAALAELYKQFGDAMVRHFMSDFNKTLDLGMIKRKAADIGA AAVTKAVHIAIDKLIPSLNRTELKAMAEYHDGLFFN >gi|333032502|gb|GL891924.1| GENE 139 124544 - 125686 1203 380 aa, chain + ## HITS:1 COG:VC0949 KEGG:ns NR:ns ## COG: VC0949 COG0772 # Protein_GI_number: 15640965 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Vibrio cholerae # 19 380 6 366 373 360 53.0 3e-99 MSPSPQYKFLRQAPRDGLSTAMQPSRWQQLHIDPWLCLFLFLNALLGLTVLYSASAQDVG LVSKQAMSFGIGFLVMISLAQIPPKVYQAFSPYFYLFGLFSLIGVMVFGEVRMGAQRWID IPGFGSVQPSEFMKIGMPMMVAWFLARKPLPPSFSQVILSLMLIGVPFLLIAEQPDLGTS LLVLASGIFVLFLSGLSWRMIGAAAACAAIVIPIAWEFLLHDYQRQRVLTLLDPEADALG TGWNIIQSKTAIGSGGFSGKGFLEGTQSHLHFLPEGHTDFIIAAYSEEFGLIGVLILVIL YSAIIFRTFQIGLQSFHNYGRLVAGAFGLSFFVYVFVNAGMVSGILPVVGVPLPFMSYGG TAIITLMATFGLVMSIHTHR >gi|333032502|gb|GL891924.1| GENE 140 125706 - 126707 1172 333 aa, chain + ## HITS:1 COG:PA4001 KEGG:ns NR:ns ## COG: PA4001 COG2951 # Protein_GI_number: 15599196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-bound lytic murein transglycosylase B # Organism: Pseudomonas aeruginosa # 18 331 23 334 340 222 38.0 9e-58 MLSQFVNKTLKVLALCTGLISTSHFAQANDFVTHPNYLNFKQKAMSTYGLSGEQVDAAMN GAKNLPNIINIMTRPGESKPWYDYRSMFLVEGTIQRGVRFKNQYADALNRAEQQFGVSQA VILGILGVETGYGANKGSFITRDALATLAFGYPRRAEYFGDELAALIAWTYKEGYPTNSI VGSYAGAIGFPQFMPSNISKYGVDFDGNGHIDLRNSAEDAIGSIANYLAKQGWQRDQPIG FMARYTGSNPESIIAKDLTQPTPYGALKNQGISPLNPLVKIDDLDMVNVIQLQDYNGPIY YLTYPNFQVITTYNKSRMYATAVWLLGTEVASR >gi|333032502|gb|GL891924.1| GENE 141 126998 - 127615 678 205 aa, chain + ## HITS:1 COG:NMB0267 KEGG:ns NR:ns ## COG: NMB0267 COG0797 # Protein_GI_number: 15676191 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipoproteins # Organism: Neisseria meningitidis MC58 # 101 200 53 152 239 139 64.0 5e-33 MQLSLKYILALTASLSMAPLHAEMMQSSSLNSDVDGPNANLAARVLSKDTQNFNSRFSNI NSLSITERSGDQIRRQAIAAKIEIPEDEPSVIEKLNTVASNTVRKFSQTGMASWYGRQFH GRKTASGETFDMNALTAAHRSLPLNCYIRVTNKDNGKSVVVKVNDRGPFHGNRVLDLSYG AAKRLGITNAGTAKVSIERVDGPTS >gi|333032502|gb|GL891924.1| GENE 142 127841 - 127990 60 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875265|ref|ZP_08443097.1| ## NR: gi|332875265|ref|ZP_08443097.1| hypothetical protein HMPREF0022_02730 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02730 [Acinetobacter baumannii 6014059] # 1 49 1 49 49 80 100.0 4e-14 MSSKISGYLFVILRESNPQKNLIFMKNGKIIEKYSTHLVLKRVKQLFLD >gi|333032502|gb|GL891924.1| GENE 143 128172 - 128624 437 150 aa, chain + ## HITS:1 COG:PA0276 KEGG:ns NR:ns ## COG: PA0276 COG4539 # Protein_GI_number: 15595473 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 129 1 138 171 74 35.0 7e-14 MKSIGEWFDEYSESHQNPINKKIHWVCVPAILFSIIGIIAHFSALLTALLVVLTLIFYAR LDLVLAVAMAALLVVMAWLIYVLPVGVGFYIALFVFAWIGQFYGHKVEGKKPSFFKDLQF LLIGPVWCMDAYLAKILPHWKSRQKKLIAQ >gi|333032502|gb|GL891924.1| GENE 144 128665 - 128982 237 105 aa, chain - ## HITS:1 COG:PA2038 KEGG:ns NR:ns ## COG: PA2038 COG4392 # Protein_GI_number: 15597234 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 1 101 1 101 104 70 36.0 8e-13 MSWLMILGLAAIVFFNRYYFLEPNVKVKLPVLMNKMLNYSAPCLLSAICIPVIFFENNEL RGFLDNPYLYATIFCTVVAFYFKKVLPSVLLSLAFFYFINFLINH >gi|333032502|gb|GL891924.1| GENE 145 128984 - 129529 471 181 aa, chain - ## HITS:1 COG:VCA1002 KEGG:ns NR:ns ## COG: VCA1002 COG1296 # Protein_GI_number: 15601755 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Vibrio cholerae # 1 181 56 238 239 130 40.0 1e-30 MSGIVFAGAAQLVSLSMVMEGASLLTIYVTIFFLTAQHFIYALTLRNDVSILPLSKRLTL GFLLTDELFAVSVPNEKKHPQYLFGAGLCFYLFWVVFSLVGILLATALPNLLNYHLDFSI IAIFVAMIVPMCKGKPVMAGILMTCVSGFVLKYFHIEGAILISGLLGMFIAVIVENKIGE K >gi|333032502|gb|GL891924.1| GENE 146 129794 - 130618 760 274 aa, chain - ## HITS:1 COG:VCA1001 KEGG:ns NR:ns ## COG: VCA1001 COG2207 # Protein_GI_number: 15601754 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Vibrio cholerae # 3 268 10 274 277 284 53.0 2e-76 MHREQADYLHLRELGGLELLKAHYHQTQFSKHTHEGYCIGVIEEGAQSFFRTGQLHVAPK GDIILVNADEIHTGSSAVESGWRYRAIYPTPEMLAEVSQDFFEQGHGAPWFPQAVIQDLG LSQQLCLLFDLLEQKDNFLLKETMYLSTLACLMVRHGKSRHTFCELPEAYSKVLKVKDLL ADMPEKNFSLQELADMVGLSAWHFLRQFKKHVGLPPHAWLVQARLQKARQLLKQGVQIVM VAQQCGFSDQSHFNRHFKKAMGVTPTQYVASLNL >gi|333032502|gb|GL891924.1| GENE 147 130717 - 131202 381 161 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02523 NR:ns ## KEGG: ACICU_02523 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 161 1 161 161 306 100.0 1e-82 MTNKKNLGIGGIIVLLIAAYLGLDLSGHKNNSTPSSSIPANQRTETTFSNDGVDTIKAAY ERRESNVQVQGSGRVKAILKEDNDGSRHQKFILILKNGLSILVAHNIDLAPKIEDLRKGD IVEFNGEYEYNEKGGVLHWTHHDPQNRHENGWLKHNGRIYQ >gi|333032502|gb|GL891924.1| GENE 148 131268 - 132143 699 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 284 1 276 283 273 54 3e-72 MTAITASMVKELRDRTGLAMMECKKALTEANGDIELAIDNLRKSGQAKAAKKAGNIAADG AITIVQDGNKAILVEVNCQTDFVAKDENFSNFAHTVAAAALAAGETDAAKIAELKLADGQ SVEEARIALVQKIGENIQVRRAKIVEGEQLAIYKHGLKIGVVVSYTGDADTGKGIAMHVA AFNPVAVNAEAVPADLIAKEKEIAEAKALESGKPANIVEKMVTGSVEKYLNEVALDRQMY VIDNEKKVADVLKATGTNVANFVRFEVGEGIEKKAELSFAEEVAAAQAAAK >gi|333032502|gb|GL891924.1| GENE 149 132281 - 133084 1337 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226952616|ref|ZP_03823080.1| 30S ribosomal protein S2 [Acinetobacter sp. ATCC 27244] # 1 267 1 267 267 519 96 1e-146 MENADIWRPNPTFKVKKMADYNVSMRDLLQAGAHFGHQTRFWNPKMRQYIFGARNKIHII NLEHTVPALNDALNFANQLASKKNKVLFVGTKRAASNIIREQAQRAGQPYVDHRWLGGML TNWKTLRQSINRLKDLQTQSQDGTFAKLTKREALERTREMEKLERSLGGVKNMGGLPDAL FVIDVDHEAIAIKEAKNLGIPVIGIVDTNSNPDNVDYVIPGNDDAIRAVTLYASAMADAI LAGKEYAQSQANAQAKGDDAAKDASEA >gi|333032502|gb|GL891924.1| GENE 150 133243 - 134070 978 275 aa, chain + ## HITS:1 COG:PA3657 KEGG:ns NR:ns ## COG: PA3657 COG0024 # Protein_GI_number: 15598853 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Pseudomonas aeruginosa # 12 272 5 257 261 342 65.0 5e-94 MNSTYTAPRRLIKTPDEIEKMRIAGRLAAEVLDMIKPHIKAGVSTLELDTICRNHIENVQ HAIPACVGYGGAPGRPAFQHSICTSVNHVVCHGIPSENKILKNGDILNIDVTVIKDGYHG DTNMMYIVGGETSILANRLCKVAQEAMYRGMATVRDGSYLGDIGHAIQKYVESERFSVVR EYCGHGIGTVFHDEPQVLHYGQAGTGMRLEAGMTFTIEPMVNAGVWQTKLLGDKWTVVTK DHKLSAQYEHTILVTKTGIEVLTARPEEDLSRFNQ >gi|333032502|gb|GL891924.1| GENE 151 134275 - 135345 1142 356 aa, chain + ## HITS:1 COG:RSc3350 KEGG:ns NR:ns ## COG: RSc3350 COG3047 # Protein_GI_number: 17548067 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Ralstonia solanacearum # 125 356 61 241 241 85 27.0 1e-16 MMKKSLFCMTAALFALPTVTSAASPYFSLKDGDGFKRFSVSAGPLYVKPTGKAQPFRINT SVKENEQSKVGDIKVKTIQDNISDSNSNVVLEELIDVIGLGTDTIPAWLSGTAEIRGLSQ WEAENTGLEADDVTTLGLMTNYFFTDNISLEVKAGIPPKVDLQGKGKIYAPFSATAKPAG GILGSMELENNIFITDLEAHGSAASARAWTPAFELQYHFGKTGVNKFRPYVGLGVMYAYF NELEINPEIENDLVNAGHMIVNIKDGKSGAALERKTSSGDPKVDLEASDAIAPVATLGFT YDFNDKWYAVGSVSYAHLKTDTTITVNDAKYGELINAKADIEINPILGYAGIGYRF >gi|333032502|gb|GL891924.1| GENE 152 135758 - 137104 1347 448 aa, chain + ## HITS:1 COG:RSp1223 KEGG:ns NR:ns ## COG: RSp1223 COG2223 # Protein_GI_number: 17549444 # Func_class: P Inorganic ion transport and metabolism # Function: Nitrate/nitrite transporter # Organism: Ralstonia solanacearum # 11 441 4 434 441 501 68.0 1e-142 MSSNINLDAKKATEIKLFSFSTPAMRAFHMTWLAFFVCFFAWFACAPLMPVIKGEFGLTK DQIANINIAAVAITILVRLAVGPLCDKYGPRITYTTLLLLGSIPVFGVAAANSYESFLFF RLLIGAIGASFVITQYHTSIMFAPNVVGTANAAAAGWGNAGGGATQALMPLLLGAIVMFG VEQTMGWRVALIVPGVMMVIVGVLYWKLTQDCPQGNFKEVRAQGIEVGSGKKGGMAILMQ AARNYRVWILFLAYGACFGIEIFIHNVAAMYYVDQFKMDLKTAGLTAGIFGLLALFARAL GGIISDKVALKKGLDGRTKVLVLMILGEGLFLILFSQMNVVALAIISMTVFALFTHMACG ATYALVPFIDRNALGGVAGIIGAGGNVGAVAAGFLLKGVLDIQTCLFILGGLVMVAGCSV ILIRFTTEHKEKEKVLFEQALLERNSAA >gi|333032502|gb|GL891924.1| GENE 153 137279 - 138493 1200 404 aa, chain + ## HITS:1 COG:PA1286 KEGG:ns NR:ns ## COG: PA1286 COG0477 # Protein_GI_number: 15596483 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 10 378 3 367 399 369 62.0 1e-102 MTKTSHQFSQSLIYMLIGSAIILALSLGVRHGFGLYLVPMSHEFGWGQHVFSLAIAMQNL IWGAVQPFTGAIADKYGSKVVVTVGGLLYTLGLLLMAFSSSVLILNLSLGLIIGLALSAT SFTVLLSAVGRAAPPEKRSMAMGIASAAGSFGQFIMLPSTLLLLKTVGWSSALMVSALLI ALIIPLAWMLKGPSNQTPKAIAQPQLTFKQVLNIARKHKPFWWLALGFLVCGFQVVFLGV HLPGYLIDHGFDAATGTVFLALVGLFNIVGTYGAGWLGDRFSKPKLLMALYGSRGIAIIA FLLLPLSTYTVYAFGIIMGLLWLSTVPLTNGIVANMFGVKYLSMLSGIVFFTHQVGSFFG GWLGGVNHDLTGNYNVIWLCSIALSILGVIVHFFVNEEAVIHDA >gi|333032502|gb|GL891924.1| GENE 154 138483 - 138617 84 44 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02530 NR:ns ## KEGG: ACICU_02530 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 44 1 44 44 67 100.0 3e-10 MTHNAVLLKTIMTFLILALLVFSIVLWKQTPDLFEYFNQAFCAH >gi|333032502|gb|GL891924.1| GENE 155 138737 - 140149 421 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 14 457 3 443 458 166 27 5e-40 MPRKKEVVSGNFVKYDAVVLGSGPAGEGAAMKLAKAGKRVAIVDVRDQLGGNCAHVGTIP SKALRQTVSSIIRYQRDPMFQKVGEWKQFTMKQVLRNAHKVIQQQVDTHTRFYDRNKIGV FHGRAYIQDKNTVLVFSHEGIKETIICKQIVIATGSRPYHPQGLDFDHPRVFDSDKILDL DYSIQKIIIYGAGVIGCEYASIFIGLDHKVDLINTQQKLLSYLDDEIADALSYHLREQGV LIRHNEQMDHLETFDDHVVLHLQSGKKIKADAILWCNGRSGNTEGLGLENVGLVPNSRGQ LSVNDQYQTEVENIYAAGDVIGWPSLASAAYDQGRCAGANMSGEDAKPVRDIPTGIYTIP EISSIGKNEQELTEEKIPYEVGQASFRHLARAQITGDTVGELKILFHRDTLEILGIHCFG NNAAEIIHIGQAVMHSPNNTLKYFVETTFNYPTMAEAYRVAALNGMNRLF >gi|333032502|gb|GL891924.1| GENE 156 140346 - 141359 1151 337 aa, chain + ## HITS:1 COG:PA3996 KEGG:ns NR:ns ## COG: PA3996 COG0320 # Protein_GI_number: 15599191 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate synthase # Organism: Pseudomonas aeruginosa # 6 317 15 326 327 439 65.0 1e-123 MSEHRKPEQGVKLRGAEKVARIPVKVVPTVEVPRKPDWIRVKMTAPEEVQRIKTTLRAQK LHTVCEEAACPNLPECFGGGTATFMIMGDICTRRCPFCDVAHGRPNALDPDEPRHMAETI ANLKLKYAVITSVDRDDLLDGGAQHFVDCIKEARALSPNTLLEILVPDFRGRMDIALRIM TECPPDVFNHNIETVPRLYKAMRPGSDYQHSLNLLKMFKEYCPDIPTKCGLMVGIGETEE EVIALLDDLRAHDVDYVTIGQYLQPSKQHAPIDRFVTPEEFERYAEHGRKLGFRNIWSAP MVRSSYFADRQYYGEPVPEVRRKVDPAKKIAVQAIEA >gi|333032502|gb|GL891924.1| GENE 157 141643 - 144108 2066 821 aa, chain + ## HITS:1 COG:YPO3244 KEGG:ns NR:ns ## COG: YPO3244 COG1960 # Protein_GI_number: 16123403 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Yersinia pestis # 5 805 1 793 815 730 46.0 0 MIFLLFVLSIVIQLVAIWAIFFFNLNRVTGSVITIAVAILTAFILTPWALLLGIPLIALS IIILFKPLRFNLITQPAYKTLANSMPSISTTEQEALEAGTSWWEKELFMGAPDWSQFEKY PYPTLSPEEQSFIDNEVEVLCSMLDEWEIHHQLKDLPPEVWQFIKDKGFLGLIIPKSFGG KEFSSFAQSRIMSKIASRSLTAAVSCMVPNSLGPGELLMHYGTDAQKQQYLPGLAKGEEI PCFGLTSPEAGSDAGAIPDSGVVCYGEYEGAQVLGLRMNFSKRWITLAPIATVVGLAFKL YDPEGLLGDKTKTEYGITCALIPANHAGVKIGARHYPGSPFMNGTVEGEDVFIPIDWIIG GQENAGKGWRMLMECLGVGRGISLPALATAAGEMSYLTVGAFARIRQQFNISVGKFEGVQ EASSEIASDAYMLEAFRYLVTCGLNQGGTPAVMTAMAKYYATETMRKVVNHGMDIAGGRA IQLGPRNFLALTYQAIPIAITVEGANILTRSLMIFGQGSMRCHPYLFEELQLLQSDDKAN AVQKFDDLLFKHLAYTFNRGARSFAYGWTGGSSDAPQSADQFTASYYKTINRFSANFSLV SDMALGLLAGDLKRKEMLSGRLADIHAHLFIATAILKYYEAGQKTEAEQLHAKLALQKAF LNIQEAFWGLFDNFPAKLPAAFVKWICFPLGRVISKPDDELKQQVAELMMEEHPFREQLK RHVYYSTEPNDVTGRLEHTFQMLRTIEPLWDKFKKAESKGKFTGLTFEENIAQAIKEGFI SESEAQQLLQYNAIRFDSMLTDVFDEKLNKVLPLSNPHQIV >gi|333032502|gb|GL891924.1| GENE 158 144212 - 144595 466 127 aa, chain + ## HITS:1 COG:PA4486 KEGG:ns NR:ns ## COG: PA4486 COG0599 # Protein_GI_number: 15599682 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Pseudomonas aeruginosa # 1 127 1 125 128 159 66.0 8e-40 MSKQDYENGLKVRTEVMGEAFVKRAQENTVPFTQPLQDWINEHAWGSTWQREGVLPRKYR SLITLAMLTALKSPTELKGHVRGALNNGCTVEEIQETLLHSLPYCGAPATQEAFRAALEV IQEYQQQ >gi|333032502|gb|GL891924.1| GENE 159 144634 - 145170 500 178 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1188 NR:ns ## KEGG: ABSDF1188 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 178 1 178 178 365 98.0 1e-100 MALNIPESLANLEANCGLFAVWMVLQHHGVQIDVAELIKVCRYDDEGTYTIALAVALKKL GFEVSFHSDHDPNISPSERMSYKEAKILKIPTGPALSYQDIQTETQNGKMVIVYYDTLEG VGNQSLIYSIDQNEICFFDSFEPMSAAVFENQRKAEGICRQAVVIGDRNLNIHSTKLN >gi|333032502|gb|GL891924.1| GENE 160 145392 - 146774 1677 460 aa, chain + ## HITS:1 COG:PA0432 KEGG:ns NR:ns ## COG: PA0432 COG0499 # Protein_GI_number: 15595629 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylhomocysteine hydrolase # Organism: Pseudomonas aeruginosa # 6 460 8 469 469 723 75.0 0 MNAVNASFTDYKVADISLADYGRKEIKLAEAEMPALIGLRKRYAASKPLAGAKILGCIHM TIQTAVLIETLVELGAEVRWTSCNIFSTQDHAAAAIAARGIPVFAWKGETEEEYVWCLEQ QINVNGQPWDANMILDDGGDLTALVHEKYPALLERIHGITEETTTGVQRLIEMWKDGTLK VPAINVNDSVTKSKNDNKYGCRHSLNDAIKRATDMLLSGRRALVIGYGDVGKGSAQSLRQ EGMIVRVTEVDPICAMQACMDGYEVVSPYKNGVQTGKKEDINHDLLGNTDLIVTTTGNYH VCDAAMLDSLKAGAVVCNIGHFDTEIDTAYLRGYKWVEVKPQVHQVYRSEDENNYLILLS EGRLVNLGNATGHPSRVMDGSFANQVLGQIHLFQEKFADLPASEKAAKIRVEVLPKKLDE EVAAAMVAGFGGVLTQLTQEQADYLGVAVEGPFKSDAYKY >gi|333032502|gb|GL891924.1| GENE 161 146819 - 147682 1044 287 aa, chain + ## HITS:1 COG:PA0430 KEGG:ns NR:ns ## COG: PA0430 COG0685 # Protein_GI_number: 15595627 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Pseudomonas aeruginosa # 17 286 17 288 290 350 60.0 2e-96 MFRCLQGFDMTKRTPISFEFFPPKTDAGAEKLRIVHQELQQLNPEFFSITYGAGGSTRER TLAAIEDFNGKGTPVAPHLSCIGDDKTRIAELLDLYKAQGIDRIVALRGDLPSGQVGLGE LPYAQDLVRFIREHSGDHFHIEVAAYPEMHPQAESLDSDIQRFIEKVQAGANAGITQFFF NPDSYFYFIERLEKAGINIPVAPGIMPITNASNLIRFADGTGAEIPRWIRKQLQAYGDDS ESIKAFGHEVVVKLCERLIAGGAPSLHFYSMNQVEPTRQLVVDLGLN >gi|333032502|gb|GL891924.1| GENE 162 147701 - 148423 661 240 aa, chain + ## HITS:1 COG:PA0419 KEGG:ns NR:ns ## COG: PA0419 COG1385 # Protein_GI_number: 15595616 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 232 3 231 240 197 46.0 2e-50 MNRFFIETELTVGSTIQLTESVFHHWVRVLRAQLQEQATLFNGQGGEYLVTLTEINKKNA FVTIENFNPVNRNAPFKAILGQVMSKGDRMDYAIQKATELGVSKIQLLTSERCEMRLKYD RDQKKLDHWQAVAIAACEQCGLNLVPEVLAPISLHEWLNSSDLPTSKFVLAPEKEQKDVL AGIQPELALLIGPEGGLSENEITQANQAGFMNWCIGDRVLRTETAPVVALSILNYRFLSI >gi|333032502|gb|GL891924.1| GENE 163 148558 - 151407 2237 949 aa, chain + ## HITS:1 COG:RSc1545 KEGG:ns NR:ns ## COG: RSc1545 COG5001 # Protein_GI_number: 17546264 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain # Organism: Ralstonia solanacearum # 509 933 328 749 776 244 34.0 6e-64 MSGLQEEYLQHQTKIEQLRLSIQYIRWYLVSLILLCLISAIIFFCYFTSYITNFIWSIGF TILTLTCLLFVPKLLTHYRDIHFIKKTDLMLQGICLTSGILMGINIIVLHFSLPDTLISV SDVHILIALFITSAHIIGLTFLTQQPRYFYLLFIPSTVPLIIGQFTHSQITQLPFYFAYN LAFVATLLCAYATQRNYQKISQLLFKNKQLVQVAEQHTQWAEELCVQLQQEVNKSKDIEA QLQFNNHLLEQKVRERTYDLTKMNERLESHHHNLAFAHETAGIRPWDWDIEKQKLEITFF DQQKQTQNTPLHLKSILERIHPNDRKLFDERLKEHLEGKSDHFNITFRILRRNGSWRWIH DVGRVISRDPKTNKALRMVGMTRDIHQEKKDQEHLRLSAIVLEQAAEGIFILDEKLNYIE VNPYYEKLTGFSKSELLSQQLFNITINQKLQQQQFHDSITQQLLKTGEYMGQFDEKFTSG KSVYLWLHINAVKDEYNQIINYIGFARDLTDQKRQEQHLSYLKNYDSLTHLPNRFYYYNQ LHQYLVNPSYSFKNLALIRINIDRFRAFNEFLNNDSGDELLKQFAQRLRLTNINAILVAY LNGDDFAIIYEISPIHPNIEQYCQNILQALNAPFYIDEQEYFITASIGVACFPEHGRQID HLNNHAEQALSEAKRLGGNTISYYCNKTTNPYKTADLEQELRKAIQNDEFVVYYQPKINL NDKSIKGFEALIRWQHPEKGLVMPNMFIPFAERSSLISDIGKVVLDKVGKQLQEWKKAGY ADVRVSVNIVAQQIHRGLLLSDLDEVLDTYHLDGSNLELEITESALLDNTDNVKKLLHSI KERNISIALDDFGTGYSSLAYLTEYPIDVLKIDRAFVSKIGDQKQEAIVNAMIAMGKSMG LKLVAEGVETEEQVIYLQKQQCDFLQGFFFSRPLHPNQILQYLQTNTHI >gi|333032502|gb|GL891924.1| GENE 164 151644 - 153914 2752 756 aa, chain + ## HITS:1 COG:STM2472_1 KEGG:ns NR:ns ## COG: STM2472_1 COG0281 # Protein_GI_number: 16765792 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Salmonella typhimurium LT2 # 3 430 2 434 434 593 68.0 1e-169 MDDQSLKQAALNYHEYPNPGKISVTPSKQLVNQRDLALAYSPGVAAPCLEIERDPSAAAK YTARGNLVAVVSNGTAVLGLGNIGPLASKPVMEGKGVLFKKFAGVDVFDIEIAENDPDKI VDIVASLEPTFGGINLEDIKAPECFYIEKKLRERMKIPVFHDDQHGTSIIVGSALLNALQ IVNKKIEEIKIVASGAGAAALSCLDLLCALGVNKENIIVADSRGLLTTSREGLDESKKRY VQDIKATQLHEVMAGADMFLGLSAAGILTKDMVKQMAENPIIFALANPDPEILPEHAHEV RPDVIMATGRSDYPNQVNNALCFPYIFRGALDVGATTINEDMKIACVHAIARMAHVEADA ATYGEKSASFGRDYLIPRPLDQRLILEIAPAVAKAAMDSGVATRPIEDFSAYRQKLSEFV YNSAFLMKPIFAQAKTDPKRIAYAEGEDERVLRAVQIAVDEDLAKPILVGRTAVIEANIK KLGLRLQHGVNIEIVDQEQNPLYEEFWKDYYQTMQRKGITVEYAQREARRRSTLIAALLV KFGKADGMLCGTYSSYNIHLDFVRNVIGLKEGMNNFFTLNALMLEDRNLFIADTYVNTNP TAEQLAEMTILAAEEVRRFGITPRVALLSHSSFGSDQTDSSAQKMREVYRILSEQAPELE VEGEMHGDAALDENIRHFAFPGSRFKGSANLLIMPNLDAANISFNLLKATSGNNVTIGPI LLGAAKPVHILTPTATTRRLINMTALTVAEIQQQEK >gi|333032502|gb|GL891924.1| GENE 165 154006 - 155244 1159 412 aa, chain + ## HITS:1 COG:PA0584 KEGG:ns NR:ns ## COG: PA0584 COG0617 # Protein_GI_number: 15595781 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Pseudomonas aeruginosa # 1 405 1 406 410 464 57.0 1e-130 MQVYLVGGAVRDYLLGHPYQEKDYVVVGATPEHMLAQGFQPVGKDFPVFLHPETKEEYAL ARTERKSGQGYHGFQFFTDTTVSLEDDLIRRDLTINAIAMDQDGKIYDPYGGQNDLENKI LRHVSEAFAEDPLRVLRVARFAARYFPYGFQIAPETLQLMQTMADSGELDALTPERVWKE TSRALMENHADIYFQTLRDCGALKHLFPEIDALFGVPQRPEYHPEVDCGIHTLMSLQQAC KSNYSLDVRFAVLVHDLGKALTPAEELPRHIMHEERGIKPVTQLCERLRVPTQTKQLALS VCKEHLKCHQIMSLKPGTLWRLLQRLDVLRRPERVEAFVQACECDAKGRLGLEDRPYPQA QYMREAMQIVRSIKVQDLPENIKGAEIGEMLIQYRIEALAEFKNQHQSLSHS >gi|333032502|gb|GL891924.1| GENE 166 155294 - 156469 1395 391 aa, chain - ## HITS:1 COG:PA4446 KEGG:ns NR:ns ## COG: PA4446 COG0265 # Protein_GI_number: 15599642 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Pseudomonas aeruginosa # 56 376 51 374 389 340 56.0 4e-93 MRRTFTWLPWVLLIIVIASFIAWQKYHQPKPTVAVDGVQMPAEKVEPLVDTSRTGGVVSY SAAVKVAAPAVVNIFTTQKVKQNHPLLSDPVFREFFGNQVPEQQQQNENSLGSGVIVRAD GYILTNNHVIAQADQIVVALHDGRRAEATIVGTDPDTDLAVIKIDLDKLPVLPFKLSGNE VGDVVLAIGNPFGVGQTVTQGIISATGRSDLGINTYEDFIQTDAAINPGNSGGALIDVAG NLIGVNTAIFSQSGGSLGIGFAIPAKVCQQVLNSILKDGRVVRGWLGISLLPPTQDDVLA PKQQVGVVVADVLKNGPADAAGIKVGDKIVQVNNEPITSASHLINYVALQAPNSEINVLV EREGKQQNYVVTVGERKAQNTQSQYIPLPRR >gi|333032502|gb|GL891924.1| GENE 167 156663 - 157421 835 252 aa, chain + ## HITS:1 COG:HI0105 KEGG:ns NR:ns ## COG: HI0105 COG0327 # Protein_GI_number: 16272079 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Haemophilus influenzae # 1 251 29 278 279 236 46.0 2e-62 MANLHEIIQWCDQTLKAAEFKDYAPNGLQIEGSTEVKRILCAVTASEDAIDAAIAQNADL LLVHHGYFWKGEPYPITGMRGNRIKKLIQNNISLVAYHLPLDAHPSLGNNIAIAEKLNLQ NLEPLDLTEKHPIGNIGYLEQALPVEEFKAKLQNSFDFKVIHLPAEKQSIQKVGFCTGGA QDFIAKAALQNCDAYISGEVSERTFYEAKELGVHYFACGHHATERYGVQRLAQAISKQFA IESEYFELNNPI >gi|333032502|gb|GL891924.1| GENE 168 157567 - 158193 461 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900660|ref|NP_345264.1| superoxide dismutase, manganese-dependent [Streptococcus pneumoniae TIGR4] # 4 198 3 201 201 182 46 1e-44 MTTITLPALPYGYDDLAPHISKETLEYHHDKHHNTYVVNLNNLIKGTDLEGKTLEEIIKA TAGDASKAGIFNNAAQVWNHTFYWNSMKPNGGGKPTGAIAAKIDEAFGSYEKFAEEFTAA ATTQFGSGWAWLVADEVNGKLSITKTSNADTPLAHGQIAVLTIDVWEHAYYIDFRNLRPK YIATFLENLVNWDYANAKLAGQPAGVEK >gi|333032502|gb|GL891924.1| GENE 169 158729 - 159172 304 147 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001095 NR:ns ## KEGG: ABBFA_001095 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 147 1 147 147 275 100.0 3e-73 MFESSHLFFIILGCLSTCIFLLVCLRPYLFPKQKFFARPVITNFETQMFIRLKQSFPSYH VLAQVAFSALITSNDYKVRSQFNRKVTDFVLLDENMEVIAIIELDDPTHLEKVEEDRLRD QMLIEAGYIVRRYTNIPSVRQLQKDIY >gi|333032502|gb|GL891924.1| GENE 170 159182 - 159382 234 66 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1130 NR:ns ## KEGG: ABAYE1130 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 66 34 99 99 105 98.0 7e-22 MSQQSVEKKSVPWLLMGLGLLIPFLIIGILFLAAKSDAQNKKQYEQQRLEMEKRIAEKET ANSDKK >gi|333032502|gb|GL891924.1| GENE 171 159494 - 160939 1611 481 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001093 NR:ns ## KEGG: ABBFA_001093 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 481 1 485 485 779 89.0 0 MKRSKIALAITLSISALFLTACNDDDDDYTGIDTNKAYVSESNYAIDKVDNASSIKVMTY NMANVQGKTATATAMVLFPKATQPKDGYRVVVWEHGTVGVGDGCAPSKNAINPRFKILAE SLLAAGYVIVAPDYEGLGTPGVHPYLNLSSEAKSALAAVKAVKEHYGAQLKGDWMSIGQS QGGHASLGTAEFANTDASYKGAVAGAPASSLGTIIQIYIDPQFNLDSNGKPKEVNKLDEN LLQVRYAVANKLITEAEGQAMIDQIADGYAELLAYAALASAGIKAQQPDYDLKAIFTSGA GDIAELAYGRTGDDGACLSYPTPDNANGLQAKFKAGILAYLADPTHQIAQYGIDLSKFKA DQVVQNFLTATQPATNATAEKVIKTPVFIIQGEKDQAVLPVVTQGLFANMKANALKFFPQ AGYDKGYQLTIVPNATHTQAIVCQNANAVDFIQAKMSAGTGIVLTDAQKDASQSPHCTGK F >gi|333032502|gb|GL891924.1| GENE 172 161050 - 161928 713 292 aa, chain - ## HITS:1 COG:PM1751 KEGG:ns NR:ns ## COG: PM1751 COG0382 # Protein_GI_number: 15603616 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases # Organism: Pasteurella multocida # 10 290 5 288 290 256 54.0 4e-68 MTTATGTTWRQRLEAYYYLCRFDKPIGTELVFWPTMWALWVASKGIPNLGILFVMILGVI FMRAAGCAINDFADRKVDGHVERTKTRPLATGVIRAREAVYVFLGLVLASACLLFFLPIE TFYWSFGALFLAFIYPFMKRYTNLPQVFLGAAFSWSIPMAFTAVGKTPDLTCWLLYFGNL AWTVAYDTQYAITDREYDLKIGVKSTAILFGRYDIQIIALLQAISLVLIGTALYLENILF PWAIIALVVVAFDFIYQTIKTKDRNPQVCFWAFRHNRWVGLIIFLGIFLNFI >gi|333032502|gb|GL891924.1| GENE 173 161925 - 162434 284 169 aa, chain - ## HITS:1 COG:PA5357 KEGG:ns NR:ns ## COG: PA5357 COG3161 # Protein_GI_number: 15600550 # Func_class: H Coenzyme transport and metabolism # Function: 4-hydroxybenzoate synthetase (chorismate lyase) # Organism: Pseudomonas aeruginosa # 10 154 12 167 178 80 31.0 2e-15 MRKRQPVLKQEKTLNPELKTWLYASGSLTQQLTELGGGKFSVKPFKEHFQRLTFADSQWM NMPHTHTSWVRETYLYGSDVEPWVKAKSIFPIQSLQKKARIFQHIGSKPIGLFLFQRTTP LCDRRVIRLPEGWTRQSCYTWHGCKFIVQETFLPAFEAFLYQQHDKELL >gi|333032502|gb|GL891924.1| GENE 174 162560 - 163969 1594 469 aa, chain - ## HITS:1 COG:RSc1258 KEGG:ns NR:ns ## COG: RSc1258 COG0174 # Protein_GI_number: 17545977 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Ralstonia solanacearum # 5 469 8 471 471 704 72.0 0 MANKVLQLIQESGAKWVDFRFTDTKGKEQHVTYPADSIDEDTFEDGKMFDGSSIAGWKGI EASDMILRPDAETGFIDPFFAEPTVVVTCDVIEPSTGQGYERDPRSIARRAEEYLKSTGI GDTAFFGPEPEFFVFDEVKWDIDMSGARHTLIAEEAAWSTGKDYESGNSGHRPRVKGGYF PVPPVDSAQDMRAEMCAKIEDIMGPGRVEVHHHEVASCQLEIGVSFNTLVRKADEVQQFK YAVWNVAHQYAKTATFMPKPMVGDNGSGMHVHMSISKDGKNLFAGDEYAGLSEMALYFIG GIIKHARALNAITNPSTNSYKRLVPHFEAPIMLAYSARNRSASIRIPYVSNPKGKRIEAR FPDPMMNPYLGFAALLMAGIDGIQNKIHPGEAADKNLYDLPPEEEAKIPTVAHSLDMALE ALQADHEFLLKGGVFTKEMLDAYIELKTEDVRRLNTTTHPVEFDMYYSL >gi|333032502|gb|GL891924.1| GENE 175 164710 - 166251 1311 513 aa, chain + ## HITS:1 COG:lin0564 KEGG:ns NR:ns ## COG: lin0564 COG3104 # Protein_GI_number: 16799639 # Func_class: E Amino acid transport and metabolism # Function: Dipeptide/tripeptide permease # Organism: Listeria innocua # 7 465 4 457 492 283 38.0 7e-76 MKYDFEQSDKAFFGHPKPLQTLFFTELWERFSYYGIRPLLVLYMIAMVNDGGLALDRPTA AAIVGLFAGSMYLMTVFGGWVADNWLGQARAVWYGSIIIALGHLSIALTSVFDQSFFYLG LVLIVLGTGLFKTCISVIVGTLYKANDARRDAGFSIFYMGINMGSFIAPLITGLLAKDHG WHLGFGIGGIGMLIALLIFRFMAMPQLQTFNELRQEANSCSKPVVENKNAPKIVFSFLFA VAVVIALTFLGIIHINPVAVATYLTVGISIGIIAYFAYLLLFLNLEQHEKFKIIICFVLL AASALFWSAFEQKPTTFTLFAQDYTDRIVFGFEIPTVWFESINALFIIIFAPVAAWLWAK LGKANKDPSYISKFIIALLFAAGGFLLMSLASHFAIHGGVVSPFWLVGTLFLLTIGELCL SPIGLSTMTKLAPDVIRSQIMGLWFTGTALGNLMAGLIGGQVSADGINHLPSLFMRCVLA LVIGAIVLFLLKKPMNKLMDKSTNKVQPDLETI >gi|333032502|gb|GL891924.1| GENE 176 166248 - 168050 1811 600 aa, chain + ## HITS:1 COG:Cj0653c KEGG:ns NR:ns ## COG: Cj0653c COG0006 # Protein_GI_number: 15792013 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Campylobacter jejuni # 8 600 6 595 596 569 47.0 1e-162 MNDLTVPEKLAKLRELMTNQSIDALVVMSADPHMSEYLPDYWKARQWLSGFSGSVGTLVV TQNFAGLWADGRYWVQAEQQLAGTGFQLQKLTSDESSTHLAWIEKNLPAGSVISVNGQTL SIQQFKALENTAKQLGFKLETQQDLIGLIWLNRPELPLEQIHLMPEGLNALSRKEKIQAI RETLKTKAIEGHFISSLDDIAWVLNARGQDVEYNPVFLSHLYISAQQAVLFIDSNKVDLT TQQAFKADGIEIRDYQDSAQFLANISNASVLLDPAKVSIYHEQAIAKDIQVVYDINPSTL FKSRKHESEIAHIRHAMVKDGVALCHFFHWLEKAFHQSQRISELTIDEKITAFRAQQEGF IGPSFSTIAGFNANGALPHYRATEEHYSFIEGDGLLLIDSGGQYVDGTTDITRVVPVGTP TEQQKRDYTLVLKCHIALAKTIYPEGLAAPLLDSICRHTLWQHGLDYRHGTGHGVGFALN VHEGPQVLSYYAPIHAYSKLREGMILSNEPGLYHEGQYGIRIENLVANRLHSGFEKTYGD FLEFETLTLCPIHLDCIVVDMLTDEEKDWLNSYHQTVQERLAEHLSGDVLDWLIYNTRKI >gi|333032502|gb|GL891924.1| GENE 177 168538 - 169734 335 398 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|239523764|gb|EEQ63630.1| 30S ribosomal protein S15 [Helicobacter pullorum MIT 98-5489] # 12 395 13 393 397 133 28 5e-30 MLSDSKIRSAKPKEKLYRLGDSDGLCVEIKPNGKKYWRYRFQWLKKTQMMSLGEYPIVGL AEARTKRDEAKSLVASGINPVEEKENQKKAKSDEYDNRVLFKHVAAEYKAEKLNNRSERY QEAFQRALDKDILKVIGDKDIKEVTSADVLTIMKKTIARVKRQKNHGTGEVSAIQNRTFI GGVMRYAIATLRADYDPTYAVKNVVERPEIEHARPMEKYEAVQLRNKLNSYGGSTTVKNA GLVMLYSMLRTIEIRRMKWEYVDFEARTITFPKEMMKKKRIHIVPMSDQVFNILQEQRNI VGNREYVFPAIYQDGMLSATTMNKMLDYIGLSDVTAHDFRATASTLLNEKDYDDKWIEKQ LAHADGNKTRATYNHAKYLESRRKMLQDWANIVDSWAV >gi|333032502|gb|GL891924.1| GENE 178 169731 - 169925 188 64 aa, chain - ## HITS:1 COG:no KEGG:ABSDF2451 NR:ns ## KEGG: ABSDF2451 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 62 1 62 63 104 93.0 1e-21 MSSQLIKIHYHAYSRVADLLADLDKKGEVTKIYDLNGNELKINFLRDEVYYKKVWWHFQK KQGG >gi|333032502|gb|GL891924.1| GENE 179 170359 - 170901 552 180 aa, chain - ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 7 179 5 176 177 165 49.0 4e-41 MNIEKYLDELIKREGGYVNNPADRGGATKYGITQAVARENGWNGNMKDLPLDVAKAIYKK QYWTAPRFDQVNAVSSAVAEELLDTGVNCGTGFAKPLLQRALNLLNNQGKAGYADLEVDG VYGSATLGALKTYLSKRGKEGEKVLVRVLNIMQGQRYIEICERNPKQEQFFYGWIANRIG Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:24:50 2011 Seq name: gi|333032501|gb|GL891925.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld313, whole genome shotgun sequence Length of sequence - 9897 bp Number of predicted genes - 18, with homology - 18 Number of transcription units - 2, operones - 2 average op.length - 9.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 232 192 ## ACICU_01030 hypothetical protein 2 1 Op 2 . + CDS 201 - 431 153 ## ACICU_01031 hypothetical protein + Prom 433 - 492 80.3 3 2 Op 1 . + CDS 583 - 963 281 ## AB57_3229 hypothetical protein 4 2 Op 2 . + CDS 1022 - 1537 459 ## COG5556 Uncharacterized conserved protein 5 2 Op 3 . + CDS 1497 - 2789 748 ## ABAYE2724 phage terminase + Term 2795 - 2822 0.1 6 2 Op 4 . + CDS 2829 - 4169 887 ## ACICU_01034 hypothetical protein 7 2 Op 5 . + CDS 4179 - 5285 690 ## ACICU_01035 phage putative head morphogenesis protein, SPP1 gp7 8 2 Op 6 . + CDS 5282 - 5512 279 ## ACICU_01036 hypothetical protein 9 2 Op 7 . + CDS 5528 - 5680 107 ## ACICU_01037 hypothetical protein + Term 5700 - 5726 -1.0 10 2 Op 8 . + CDS 5732 - 6046 451 ## ACICU_01038 hypothetical protein + Term 6065 - 6092 -0.1 11 2 Op 9 . + CDS 6133 - 6924 840 ## ABBFA_002543 hypothetical protein 12 2 Op 10 . + CDS 6938 - 7888 1208 ## ACICU_01040 prophage LambdaCh01,coat protein + Term 7895 - 7922 -0.9 13 2 Op 11 . + CDS 7933 - 8268 509 ## ACICU_01041 hypothetical protein 14 2 Op 12 . + CDS 8272 - 8652 377 ## ACICU_01042 hypothetical protein 15 2 Op 13 . + CDS 8653 - 9021 339 ## ACICU_01043 hypothetical protein + Term 9023 - 9064 -0.8 16 2 Op 14 . + CDS 9090 - 9287 192 ## ACICU_01044 hypothetical protein 17 2 Op 15 . + CDS 9295 - 9588 303 ## ACICU_01045 hypothetical protein + Term 9596 - 9622 -1.0 18 2 Op 16 . + CDS 9640 - 9895 165 ## ACICU_01046 hypothetical protein Predicted protein(s) >gi|333032501|gb|GL891925.1| GENE 1 2 - 232 192 76 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01030 NR:ns ## KEGG: ACICU_01030 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 69 144 144 126 100.0 3e-28 KLRLLIEIEGGSWSGGRSGKLSNKAWSLDRYDHAEEMGYKIERFHPDSVLSGYVINWIKD ELARIEDGADQTISTD >gi|333032501|gb|GL891925.1| GENE 2 201 - 431 153 76 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01031 NR:ns ## KEGG: ACICU_01031 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 75 1 75 213 162 100.0 6e-39 MEQIRPFPPTDFIDQADEEEAIRLTPAPDLKKWVVANYLTIGGPLYNPDHDHIAELLHDN EEFLACAWASSAYKSN >gi|333032501|gb|GL891925.1| GENE 3 583 - 963 281 126 aa, chain + ## HITS:1 COG:no KEGG:AB57_3229 NR:ns ## KEGG: AB57_3229 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 126 88 213 213 276 100.0 2e-73 MFNVGGWRKARQEQQMRDWFGFVPTYLITIDATFCDKANDREFCALLEHELYHIGVERDE DGEMIFSSSTGLPKHYLAGHDVEEFVGVTKRWGASQSVKRIVEAAKNPPFVSKLDISKCC GNCVIN >gi|333032501|gb|GL891925.1| GENE 4 1022 - 1537 459 171 aa, chain + ## HITS:1 COG:YPO2102 KEGG:ns NR:ns ## COG: YPO2102 COG5556 # Protein_GI_number: 16122341 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 92 1 92 149 97 54.0 1e-20 MAALKEQVKIFIVQALACMDTPQQVANAVKQEFNIEIDRKQVQLYDPTKAAGKNLSKKYK DLFHKTREDFKKNVYDIPLANKAYRLKELQKIYEDWKNNRLMKQGVIKQVREEMQGYDLM LLNLELKQLEIEKLREGEGDEDPTPVKVTIQVVDASKKDAEHQSDTECTSG >gi|333032501|gb|GL891925.1| GENE 5 1497 - 2789 748 430 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2724 NR:ns ## KEGG: ABAYE2724 # Name: not_defined # Def: phage terminase # Organism: A.baumannii_AYE # Pathway: not_defined # 1 430 8 437 437 875 97.0 0 MPNINPTLNVPQANFLQMEKKFRAFVAGFGSGKTWVGCSSLCNKAWEFPKVPLGYFAPTY PQIRDIFFPTIEEVAFDWGLKTKVYETNKEVDIYYGRQYRTTIICRSMEKPATIVGFKIG HALIDELDVMAKVKAQQAWRKIIARMRYKQAGLLNGIDVATTPEGFKFTYEQFVKEANKS EAKRKLYGMIQASTYDNEANLPDDYISSLYESYPPQLISAYLRGQFVNLTSGAVYPDFDR VLNHTDEEIKKGEPLLIGMDFNVLKMAAVVYVIREGKPRALDELVGVRDTPTMCQLINER FPDHDITVIPDASGQATSSKNFSESDHAILKKNGFKVEVNGVNPGIKDRITAVNAQILNA EGERHLKVNTNKCPNFTATLEQQVYDDFGMPDKSAGLDHVGDAGGYPIAKRFPVIIQKIF KRRAIAGFSR >gi|333032501|gb|GL891925.1| GENE 6 2829 - 4169 887 446 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01034 NR:ns ## KEGG: ACICU_01034 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 446 1 446 446 891 100.0 0 MAVTDKHPQYIAAQKSWEIMRDAVAGEEQIKQAQTKYLAKSAGMIEAEKQGDTTGEIYKA YLSRAQYPLWVQDALRTMIGLVSKLEPNIVIESSLLKGLIENATNDGFGLKQLFIRICSE LLEFGRCGLLVDVDGAGVPYFALYDALSIINWKENSIGGRKDLKLLVLEEQFENSEDEFG HDTKTVHRVLSMVDGALTVRLFDGSVEEDKTPDLGGNQLSFTPFVFCGTTDNSPQVGTVP LLTMAKAALKYYQLSADYYQSLHHTAHPQPWINGLEGDEDISVTGVMAVWSLPSESQCGY LEISGSGIELTKKEMDAQKNSALEAGAKVIDTNSQESGEARRARQDDQQASLHSIVTCAA AAIEQAIKYAAQWLKLDSTKYAFTVEPEFIVQQYDINLAKQLYEGAIAGKNSFRTYWEYL MTGKLPAHDYQEEVKRVEGERDSMPL >gi|333032501|gb|GL891925.1| GENE 7 4179 - 5285 690 368 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01035 NR:ns ## KEGG: ACICU_01035 # Name: not_defined # Def: phage putative head morphogenesis protein, SPP1 gp7 # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 368 1 368 368 716 100.0 0 MASKEDKSLIEVLTQHQAYLYRVSSQSVNELLKIFNDESILMLAKLRDLLDELNDSEKMA LASGQYTTTNLKEIRDLIAQWFIGLNTALPEAFAVSATALAVYEANYTAKLYGGKIKKPN GEKLYAAAKKVPLVGGALVDELLSKIAETARQKVEYAIRDGINSGKTNQEIVQRIRGTKR LNYEDGLLSSSKTDIDRTVRTVRSHVANQAYLNSFNQIGFEYVRLVATLDGRTSKLCATL DGSVWEINDPAKRVPPLHPNCRSILVPVEKDGKLVGERPFVMDERRVKDIPKEERSQLIG QLDANTTFREFFKKTDDFFQREWLGPKRYKLYKEGKFDFDKFFDPEGRLYTLDQLRKLDE QTFKELGL >gi|333032501|gb|GL891925.1| GENE 8 5282 - 5512 279 76 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01036 NR:ns ## KEGG: ACICU_01036 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 1 76 76 145 100.0 4e-34 MSESRHLVLKRHPTLKGYLVICDEETGQPLAGQRAVQMNSDALNGPATITVTFEAYGAHG VRLLTDEPRPTQTKQM >gi|333032501|gb|GL891925.1| GENE 9 5528 - 5680 107 50 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01037 NR:ns ## KEGG: ACICU_01037 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 50 1 50 50 77 100.0 2e-13 MSEKQINMSDAQYILSTKLILVPFLQIKISRAMAIYGFTFERLKAIALIN >gi|333032501|gb|GL891925.1| GENE 10 5732 - 6046 451 104 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01038 NR:ns ## KEGG: ACICU_01038 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 104 1 104 104 192 100.0 4e-48 MIKEVTEQELAEKSVAPRVTKAQIDSLMERVTYTVEQRPGGTTSTFVHAFLDGKFFLATG FSACVNAENFDAEIGERMARGNAEKSAENKLWELEGYRLFATNY >gi|333032501|gb|GL891925.1| GENE 11 6133 - 6924 840 263 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002543 NR:ns ## KEGG: ABBFA_002543 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 263 1 263 263 427 99.0 1e-118 MSLPFIVDSLDAIKEEHRALYVEENGKFRLDLEGYEDPKGLKSALQSERDAAKNAKLELQ KLQKQFEGIDPEIVKKVFAQIDQDEEAKLIAEGKVNEVIQKRTEKMREEHEKLLKAEKER ADKAEAYAQKFKQSVIQSQIVQAAIELEALPEATPDIAFLAQSKFALDENGKAVAVDENG EVVIGKDGQTPMTPKEWVESLREQKPYYWPKPNGMGAPGSNNSKGQPDILKADGSVNMTK LAQLRNENPQLAKELAAKHGIKL >gi|333032501|gb|GL891925.1| GENE 12 6938 - 7888 1208 316 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01040 NR:ns ## KEGG: ACICU_01040 # Name: not_defined # Def: prophage LambdaCh01,coat protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 316 1 316 316 600 100.0 1e-170 MAETKIADVIVPELFTPYVLNKTAEKSALWQSGIVGELDEKVAFGTEGGTTVNIPFWNDL SGESEVLSDGKALGVNNITAGKDIAILHARGKAWGANDLSKALSGDDPLGAIADLVADYW AREFQGFTVNTLKGVFGSASMAGNTHDISAGTGAAAVIDGHSFIDASYKLGDAVDKLTAI SMHSFTMAALAKQGLIETVRDADGVVLYKTFMDRRVIVDDGMPVDGDVFTSFLFGQGAIG FQDIGAPVGVETDRDSLAGTDILINRRHFVLHPRGIKWAGDTGIAPNNAGLATAANWERV YDPKQIRIVAFKHKIK >gi|333032501|gb|GL891925.1| GENE 13 7933 - 8268 509 111 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01041 NR:ns ## KEGG: ACICU_01041 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 111 1 111 111 171 100.0 6e-42 MGLSSFNRARERQQMTETKIAELEEQLATVKGEFIAFQNDTEAMKARIAELESGEGGQTP EDDQKPSDTQPQPINYAGLKVDELRAVLTEKGIAFEAGAKKDELLALIPKE >gi|333032501|gb|GL891925.1| GENE 14 8272 - 8652 377 126 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01042 NR:ns ## KEGG: ACICU_01042 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 126 1 126 126 208 100.0 6e-53 MSFITEQEAIEHVEGFDALSASDKAQYLQMAEAYLLARNVKPYEDATQVPEPLKTASYQI IKGIMKGDLYQGQEQALKRKKVKADTVETEKEYQDGSVKLSAIEQFILDLIKPYSKRKAV FFVRKI >gi|333032501|gb|GL891925.1| GENE 15 8653 - 9021 339 122 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01043 NR:ns ## KEGG: ACICU_01043 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 122 1 122 122 239 100.0 2e-62 MGLREEIQADIAEAFNDDLADAVHSFTCDRISRKDWDPKTETYVEVKENYSGRGVLFGSY SQYEIQTLGVLATDKKATVLQNEVTKEPKIDDEWLTALGSFRVIHIQQDPASTIWKCQLR KV >gi|333032501|gb|GL891925.1| GENE 16 9090 - 9287 192 65 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01044 NR:ns ## KEGG: ACICU_01044 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 65 1 65 65 111 100.0 9e-24 MGYIVKLTDSGKYLIPDNEGLLTTTDSKEKAVEFGQIDDEESAKLTAHSFSGGMTTGVDF IIEKV >gi|333032501|gb|GL891925.1| GENE 17 9295 - 9588 303 97 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01045 NR:ns ## KEGG: ACICU_01045 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 97 1 97 97 187 100.0 1e-46 MATQAYVIVIEIPEKKCPNVRGKASLIKDGKAKVYLSNNTTSRDAENGFDRYGVTGGRNA VVVTEATFPKYEEEITNYLNRRFGEDWSLKLEKCSVA >gi|333032501|gb|GL891925.1| GENE 18 9640 - 9895 165 85 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01046 NR:ns ## KEGG: ACICU_01046 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 85 1 85 136 165 100.0 5e-40 MVNTNYVPLWLISPFQHVHYTLVRNQLHMDLLFEDMNKVDQFLSIEGAAAQVDFYSEGAY AVVQLGDTSERNQIEVYGLLLHEAV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:26:06 2011 Seq name: gi|333032500|gb|GL891926.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld353, whole genome shotgun sequence Length of sequence - 78568 bp Number of predicted genes - 70, with homology - 69 Number of transcription units - 51, operones - 13 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 86 - 145 5.8 1 1 Op 1 . + CDS 346 - 1683 951 ## COG3182 Uncharacterized iron-regulated membrane protein + Prom 1711 - 1770 2.9 2 1 Op 2 . + CDS 1848 - 3521 1531 ## COG0069 Glutamate synthase domain 2 + Term 3533 - 3571 7.3 - Term 3521 - 3558 3.3 3 2 Op 1 . - CDS 3563 - 4591 971 ## COG2267 Lysophospholipase 4 2 Op 2 . - CDS 4591 - 5721 1359 ## ACICU_02241 hypothetical protein 5 2 Op 3 1/0.300 - CDS 5726 - 6760 1078 ## COG0812 UDP-N-acetylmuramate dehydrogenase 6 2 Op 4 . - CDS 6780 - 7283 372 ## COG0394 Protein-tyrosine-phosphatase - Prom 7319 - 7378 8.3 - Term 7340 - 7379 1.1 7 3 Tu 1 . - CDS 7584 - 8828 964 ## COG2706 3-carboxymuconate cyclase - Prom 8854 - 8913 6.3 + Prom 8973 - 9032 7.0 8 4 Op 1 1/0.300 + CDS 9054 - 10211 1098 ## COG1454 Alcohol dehydrogenase, class IV 9 4 Op 2 . + CDS 10211 - 10645 448 ## COG0824 Predicted thioesterase - Term 10636 - 10688 13.5 10 5 Tu 1 . - CDS 10694 - 12922 1916 ## COG3511 Phospholipase C - Prom 13040 - 13099 6.0 - Term 13099 - 13137 -0.3 11 6 Tu 1 . - CDS 13246 - 15282 1940 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 15392 - 15451 4.3 - Term 15395 - 15435 5.7 12 7 Tu 1 . - CDS 15456 - 16934 1419 ## COG0477 Permeases of the major facilitator superfamily - Prom 16975 - 17034 5.3 + Prom 16934 - 16993 6.0 13 8 Tu 1 . + CDS 17060 - 17638 524 ## COG1309 Transcriptional regulator 14 9 Tu 1 . - CDS 17686 - 18945 1413 ## COG1680 Beta-lactamase class C and other penicillin binding proteins - Term 18971 - 19008 6.2 15 10 Op 1 7/0.050 - CDS 19017 - 19871 991 ## COG2030 Acyl dehydratase - Term 19899 - 19928 1.2 16 10 Op 2 . - CDS 19946 - 21337 1842 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 21377 - 21436 3.7 + Prom 21439 - 21498 2.5 17 11 Tu 1 . + CDS 21573 - 23141 1764 ## COG0183 Acetyl-CoA acetyltransferase + Term 23164 - 23197 4.7 - Term 23150 - 23185 5.1 18 12 Tu 1 . - CDS 23207 - 23719 462 ## COG4125 Predicted membrane protein - Prom 23887 - 23946 3.2 + Prom 23639 - 23698 9.5 19 13 Tu 1 . + CDS 23732 - 24625 804 ## COG0583 Transcriptional regulator + Prom 24665 - 24724 6.1 20 14 Op 1 . + CDS 24756 - 25745 1167 ## COG0176 Transaldolase + Term 25771 - 25811 8.5 21 14 Op 2 . + CDS 25818 - 26468 660 ## COG1280 Putative threonine efflux protein + Term 26563 - 26597 3.7 22 15 Tu 1 . - CDS 26505 - 26978 509 ## COG1522 Transcriptional regulators - Prom 27047 - 27106 8.9 + Prom 27011 - 27070 5.4 23 16 Tu 1 . + CDS 27165 - 28337 1075 ## COG3135 Uncharacterized protein involved in benzoate metabolism - Term 28339 - 28402 9.5 24 17 Op 1 2/0.250 - CDS 28411 - 29130 799 ## COG1285 Uncharacterized membrane protein 25 17 Op 2 . - CDS 29146 - 31902 2512 ## COG0474 Cation transport ATPase - Prom 31942 - 32001 1.6 26 18 Tu 1 . - CDS 32003 - 32164 79 ## ACICU_02263 hypothetical protein - Prom 32400 - 32459 7.5 - Term 32254 - 32286 1.7 27 19 Tu 1 . - CDS 32466 - 32909 483 ## COG1714 Predicted membrane protein/domain - Prom 32985 - 33044 10.8 - Term 33105 - 33138 3.1 28 20 Tu 1 . - CDS 33182 - 33355 200 ## ABBFA_001405 hypothetical protein - Prom 33461 - 33520 7.2 - Term 33403 - 33466 4.6 29 21 Tu 1 . - CDS 33534 - 33761 272 ## ABBFA_001404 hypothetical protein - Prom 33827 - 33886 8.7 + Prom 33874 - 33933 8.5 30 22 Tu 1 . + CDS 34050 - 34493 675 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 34512 - 34545 3.1 + Prom 34533 - 34592 7.1 31 23 Tu 1 . + CDS 34753 - 36336 1221 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 36354 - 36406 6.2 32 24 Tu 1 . - CDS 36410 - 36835 446 ## A1S_2074 hypothetical protein - Prom 36857 - 36916 9.6 - Term 37201 - 37246 10.0 33 25 Op 1 . - CDS 37257 - 37388 145 ## - Prom 37497 - 37556 4.0 - Term 37488 - 37553 2.3 34 25 Op 2 . - CDS 37568 - 38623 1147 ## COG3047 Outer membrane protein W - Prom 38822 - 38881 9.7 - Term 38940 - 38966 -1.0 35 26 Tu 1 . - CDS 38985 - 41141 2172 ## COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid - Prom 41232 - 41291 12.9 + Prom 41179 - 41238 7.7 36 27 Tu 1 . + CDS 41334 - 41840 490 ## COG3153 Predicted acetyltransferase 37 28 Tu 1 . - CDS 41873 - 42256 204 ## ACICU_02274 hypothetical protein - Prom 42354 - 42413 5.5 - Term 42271 - 42317 -0.2 38 29 Op 1 . - CDS 42431 - 42712 209 ## ABAYE1490 hypothetical protein - Prom 42782 - 42841 6.5 - Term 42816 - 42843 -0.1 39 29 Op 2 . - CDS 42901 - 43371 304 ## ABAYE1489 hypothetical protein - Prom 43538 - 43597 10.1 - Term 43508 - 43554 2.4 40 30 Tu 1 . - CDS 43784 - 44035 247 ## ABBFA_001392 hypothetical protein - Prom 44270 - 44329 6.5 - Term 44277 - 44321 7.0 41 31 Tu 1 . - CDS 44334 - 45569 1116 ## COG0668 Small-conductance mechanosensitive channel - Prom 45593 - 45652 6.5 + Prom 45932 - 45991 12.0 42 32 Tu 1 . + CDS 46019 - 48289 2031 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 48318 - 48356 6.2 - Term 48304 - 48343 6.8 43 33 Tu 1 . - CDS 48352 - 48906 289 ## ACICU_02280 TetR family transcriptional regulator - Term 49760 - 49805 8.3 44 34 Tu 1 . - CDS 49838 - 50212 250 ## ABAYE1480 hypothetical protein - Prom 50346 - 50405 6.8 + Prom 50695 - 50754 5.4 45 35 Tu 1 . + CDS 50774 - 51271 443 ## COG1522 Transcriptional regulators + Term 51446 - 51486 -0.9 46 36 Op 1 . - CDS 51300 - 51857 565 ## COG1605 Chorismate mutase 47 36 Op 2 . - CDS 51935 - 52618 362 ## ACICU_02285 oxidoreductase 48 36 Op 3 3/0.200 - CDS 52628 - 53389 608 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 49 36 Op 4 . - CDS 53397 - 54083 801 ## COG0625 Glutathione S-transferase - Prom 54154 - 54213 9.6 - Term 54203 - 54241 6.1 50 37 Tu 1 . - CDS 54273 - 56879 3188 ## COG0308 Aminopeptidase N - Prom 57031 - 57090 7.3 + Prom 57055 - 57114 6.0 51 38 Tu 1 . + CDS 57198 - 57455 325 ## ACICU_02289 hypothetical protein + Term 57476 - 57526 8.2 52 39 Op 1 . + CDS 57580 - 58764 905 ## ACICU_02290 hypothetical protein 53 39 Op 2 . + CDS 58798 - 59625 958 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family + Term 59756 - 59785 -0.2 - Term 59601 - 59642 2.7 54 40 Op 1 . - CDS 59654 - 60505 724 ## COG3449 DNA gyrase inhibitor 55 40 Op 2 . - CDS 60587 - 60946 334 ## ABAYE1465 5-carboxymethyl-2-hydroxymuconate delta isomerase (EC:5.3.3.10) 56 40 Op 3 . - CDS 60990 - 62702 1699 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Prom 62781 - 62840 6.1 + Prom 62733 - 62792 7.3 57 41 Tu 1 . + CDS 62933 - 64105 1399 ## COG1454 Alcohol dehydrogenase, class IV + Term 64169 - 64208 3.0 + Prom 64167 - 64226 4.0 58 42 Tu 1 . + CDS 64300 - 65268 962 ## COG2267 Lysophospholipase 59 43 Tu 1 . - CDS 65265 - 66455 1093 ## COG3284 Transcriptional activator of acetoin/glycerol metabolism - Prom 66587 - 66646 5.3 + Prom 66423 - 66482 7.1 60 44 Tu 1 4/0.150 + CDS 66599 - 68110 1824 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 68170 - 68218 10.4 + Prom 68165 - 68224 7.5 61 45 Op 1 2/0.250 + CDS 68332 - 69768 1589 ## COG0531 Amino acid transporters 62 45 Op 2 8/0.050 + CDS 69785 - 71170 1363 ## COG4303 Ethanolamine ammonia-lyase, large subunit 63 45 Op 3 . + CDS 71181 - 71996 864 ## COG4302 Ethanolamine ammonia-lyase, small subunit + Term 72004 - 72061 4.2 + Prom 72077 - 72136 4.4 64 46 Tu 1 . + CDS 72160 - 72882 800 ## COG0518 GMP synthase - Glutamine amidotransferase domain + Term 72997 - 73048 -0.2 - Term 73196 - 73247 8.6 65 47 Tu 1 . - CDS 73308 - 75035 1979 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 75066 - 75125 4.9 + Prom 75014 - 75073 4.2 66 48 Op 1 8/0.050 + CDS 75204 - 75713 654 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 67 48 Op 2 . + CDS 75729 - 76448 739 ## COG2908 Uncharacterized protein conserved in bacteria + Term 76609 - 76663 3.0 68 49 Tu 1 . - CDS 76456 - 76686 71 ## ACICU_02307 hypothetical protein - Prom 76712 - 76771 5.5 69 50 Tu 1 . + CDS 76826 - 77479 666 ## COG0778 Nitroreductase + Term 77489 - 77531 10.1 70 51 Tu 1 . - CDS 77518 - 78291 596 ## ACICU_02309 putative integral membrane protein - Prom 78392 - 78451 5.7 Predicted protein(s) >gi|333032500|gb|GL891926.1| GENE 1 346 - 1683 951 445 aa, chain + ## HITS:1 COG:Cgl2275 KEGG:ns NR:ns ## COG: Cgl2275 COG3182 # Protein_GI_number: 19553525 # Func_class: S Function unknown # Function: Uncharacterized iron-regulated membrane protein # Organism: Corynebacterium glutamicum # 11 375 33 402 475 192 33.0 1e-48 MSPTSSFWRSLFRLIHIYAGIFIAPFIFVAAFTGLLYAITPQLEQFIYKDVLNVQPLNQI YPLSQQIESARKVMPATAKITEVRPSPSPVQTTRVIFSDHTHHLNNEAIFIDPYTLSVKG QLAVYGTSGVLPLRTFLDQLHSNLLLGKWGRFYSELAASWLGFLTLSGLYSWWKRRSNFK NRQTNKNHLLKWHSSIGLALLPLLFFIAITGLTWSQWAGDNIRIARQWLNWQTPILTTSL NQISLPEMAHHEHHEMIMETPNLDIMPAEFDSVLAIARANGINSTEIQIKPPVAANQAWT VAEIQRKWPTQADSIAIDMHEHKVIDKLAFKDYSLVAKLTRWGVDAHIGVLFGWVNQLIL VLYALGLCIMIVYAYKAWFKTSNVKLTTHHFINQTLFVWKHATTQQRIITTLMLAILGLS LPIFGFSLVITLFILLIKKQLPLKA >gi|333032500|gb|GL891926.1| GENE 2 1848 - 3521 1531 557 aa, chain + ## HITS:1 COG:PA3602 KEGG:ns NR:ns ## COG: PA3602 COG0069 # Protein_GI_number: 15598798 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Pseudomonas aeruginosa # 15 557 4 532 536 764 64.0 0 MASPAQIIRHKFLNTFFSRHSIWFLCIFTVLTITWFRTVYTPHSIYYFISDTLLNGLWVV SGALSLLGLYDVLQNRHSILRNYPIMGHFRFLFEDIRPEIRQYFIEADQDALPFSRMQRS LVYQRAKNENADKPFGSIIDVYQEDYRFIVHSISPCPPADPKSFRIQIGNTQCLQPYSAS IMNISAMSFGSLSANAIRALNKGAQLGGFYHDTGEGSLSPYHLENGGDIVWQIASGYFGC RTLDGKFDEQKFAKQSQLPQIKMIELKLSQGAKPGHGGILPKHKITAEIAEIRGVSRDHD CISPAKHSSFSTPIEMMHFLQKLRTLSGGKPVGFKLCIGQPWQFMSIVKAMLETKIVPDF IVVDGSEGGTGAAPIEFSDYIGTPLREGLRFVHNTLVGAGLRDQVKIGASGKIISAFDIA STFALGADWVNSARGFMFAVGCIQAQSCHTNQCPVGVATQDKDRQKALHVPTKAERVFNF HKNTLHALSEMIAAAGLRHPSDIKAHHLAQRINDREIKNYAQLHFFLKEGELLQSELKND DDNFYYRMWNMADANHF >gi|333032500|gb|GL891926.1| GENE 3 3563 - 4591 971 342 aa, chain - ## HITS:1 COG:PA0308 KEGG:ns NR:ns ## COG: PA0308 COG2267 # Protein_GI_number: 15595505 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Pseudomonas aeruginosa # 2 322 6 326 339 174 34.0 2e-43 MSEIPFLNPAVLKQLDLPVPNRELTPQVLSPLNLNTLEEPSRELLAYRKLYGLHLLDCEH WQGYVQMPLFRLHVQVFKPKLDKIQGTVCLLHGYLEHSGIYQPIIREILEQGFSVITYDL PGHGLSNGSPASIQNFDHYQQVLMAVYQYVKHADQLPKPWVGIGQSTGGAIWMHHLLEYA EKRQDPIVDRVLLLSPLIRPAKTAWWHNPVGLGIIRRIKRQVPRHFRRNNHNPEFLRFIR LKDPLQPRMMGMDWILAMSKWMQEMEERPACRIPVWLAQGALDQTVDWRYNIEFIRRKFR LQTLLMLEEGSHQLINERADIRAALTGLIPAFLHAKPKHFYY >gi|333032500|gb|GL891926.1| GENE 4 4591 - 5721 1359 376 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02241 NR:ns ## KEGG: ACICU_02241 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 376 1 376 376 697 100.0 0 MPKVHLMVRFVQVVTVLFVLLGCFVIFLYSPFYSKLIVAGLNYFVPVDVNEVAAESQRKA ALSEHDNLEPGSNLWIARQAYLKLTEDALRENKTADLGYIQENYKALQQIILLEEKEQEL QEEKETTAVSVPLVAKNSEIDAADEASSPIDAALSINSSENKALTEQYTEFLARKPVVPE HQKAASEPEQKVEYVRKNPLPAQPKKLSEPYAIVVLGGGLTLDKNGKDIVVNSYTRLRLE KTLEVEKKNHLPIVLSGVEAPYMQAWLKARGVDAKLLEKRSMNTCENTRFSSLLLQKKGG APTVMLVTDEYHMPRTRRLFALNGIETIPVTAPMPTPLTRWQPSTQNYDHSRRANYELLA TIRDMLFGSSDCREVP >gi|333032500|gb|GL891926.1| GENE 5 5726 - 6760 1078 344 aa, chain - ## HITS:1 COG:PA2977 KEGG:ns NR:ns ## COG: PA2977 COG0812 # Protein_GI_number: 15598173 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Pseudomonas aeruginosa # 1 333 3 339 339 272 43.0 7e-73 MQIQNQVQLKPFNTLSLDVTASHYTKVKSIEDIEEALAFAKEHELNVLVLSGGSNMLLPQ QINALVIHLDIQGIDVLSEDQDFIRVKVGAGQVWHDFVLYSTKQNWFGLQNLALIPGLVG ASPVQNIGAYGVEVGEFIESVQVYDRLLKQTGSISAADCHFSYRHSIFKDDPARYIITHV TFKLLKQANLKLNYGDLKQAVGDNLTAENLQNQVIHIRQSKLPDPKEYPNVGSFFKNPIV NTQEFERLIAQFSTIPHYPQANGNVKIAAGWLIDQAGWKGKQLGVVGMFHKQALVLVNYA NASLADVKKTYQAVQHDVEQRFQIMLEPEPVLYNNLGLIENHTE >gi|333032500|gb|GL891926.1| GENE 6 6780 - 7283 372 167 aa, chain - ## HITS:1 COG:PA2978 KEGG:ns NR:ns ## COG: PA2978 COG0394 # Protein_GI_number: 15598174 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Pseudomonas aeruginosa # 6 153 2 142 154 134 51.0 8e-32 MEAQYKVLCVCLGNICRSPTAEVVFRHYCDQHQLNIIVDSAGTSNYHPNKAPDQRSQLHA KKRGYDLSSLRARQLSTQDFLDFDLILAMDHQNFDDIHDLLQRAIFQFGSHQIRAKVALM SEHDPQYPQQALPDPYYGGDEGFERVLDQCESSALAWINILKKQLNV >gi|333032500|gb|GL891926.1| GENE 7 7584 - 8828 964 414 aa, chain - ## HITS:1 COG:PA4204 KEGG:ns NR:ns ## COG: PA4204 COG2706 # Protein_GI_number: 15599399 # Func_class: G Carbohydrate transport and metabolism # Function: 3-carboxymuconate cyclase # Organism: Pseudomonas aeruginosa # 44 413 17 384 388 189 32.0 1e-47 MKIDTDVNTGYGKDTDKNGYANIKYRELIQKLTATLSLTLLSFGWGSTVNAAQQQIALVG TWTSIPDAPLVQKPEKASEGLYQLQVNADGTLTPVKVLQMKSPSWVVKSKDGRFAYTTNE ENEGAVTALSVQNGKVEVLNTVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLP ILPNGHLGEMVQNIVFAEGSGHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYN PSKPQPLEADKSRDVSFKHGSGPRHMVFSPNGKQAYITAEMRSEIVTFNVQDGHLKKVAE LKLVHEDKTPEFKSASGIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGI EPRAFSFDESGKYLYVTNVYSNNISLFRFDTKNGSLKPLGDAAKISTPTDIKFF >gi|333032500|gb|GL891926.1| GENE 8 9054 - 10211 1098 385 aa, chain + ## HITS:1 COG:AGpA199 KEGG:ns NR:ns ## COG: AGpA199 COG1454 # Protein_GI_number: 16119364 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 385 19 399 399 379 54.0 1e-105 MSHFQFQTVPNIISGLGSIQELQNVLASKTYRKLLLVTDAGMIKNQLHLPILQILDTLKI EHVIYADVQADPPEQVVLDAANYAKQQNVDVIVGFGGGSSLDVAKVIALLAHPNQTQNLQ EMYGVNQVKTARLPLILIPTTAGTGSEVTPISIVTTGETTKMGIVSPVLYADTAILDATF TQNLPAHITAATGIDAMVHAIEAYTSKHKKNIYTDILAKHALKLLNHNLPKVLKNGNDLE ARQNMLFGSMLAGQAFANSPVAAVHALAYPLGGHFHLSHGHTNALVLVEVLKFNAPYAKQ YYAELMQWLDPYSNGSTDGLCDLFIDHMQNHLDRSGLTLKLSDLGIEESSLPRLAQDAML QTRLLQNNPRDMTEAAALAIYQAIY >gi|333032500|gb|GL891926.1| GENE 9 10211 - 10645 448 144 aa, chain + ## HITS:1 COG:PA5185 KEGG:ns NR:ns ## COG: PA5185 COG0824 # Protein_GI_number: 15600378 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Pseudomonas aeruginosa # 9 139 9 139 147 152 50.0 2e-37 MTKPVLKTRDQFKFFLDIQTRWADNDIYGHVNNVTYYSYFDTAANALLIQKTGFDIHEAK SIGLVVDSACSFFQELSFPEVIQVGVAIGKIGTTSLRYELAIFKQGQDQASAQGHFVHVF VDRETRKTVPISESVREVLENFLL >gi|333032500|gb|GL891926.1| GENE 10 10694 - 12922 1916 742 aa, chain - ## HITS:1 COG:PA3319 KEGG:ns NR:ns ## COG: PA3319 COG3511 # Protein_GI_number: 15598515 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phospholipase C # Organism: Pseudomonas aeruginosa # 3 741 5 685 692 636 48.0 0 MITRRKFLNYSLNMGFGAAALAAFPSSIQKALAIPANNKTGTIQDVEHVIILMQENRSFD HYFGTLKGVRGFADRFTIPLPNGRRVWEQLRSNGQVLTPFHLDGTANNAQRADGTPHTWD DSQLAWDNGRMANWPTHKTDISMGYFKEKEIPYQFALANAFTICDAYHCSMHTGTDANRS FHLTGTNGATPTKRSFVNNEWDWIDGNPATADRGYTWKTYAERLEEAGISWICYQNMPDE WGDNMLGAFRSFRKANIASGYPVSSGGEPNKPYADTGQKLPYKAYDAATDNAKNPLYKGI ANTLPGNKPEEYLDAFKRDIREGKLPQVSWINAPSIYCEHPDPSSPVQGAWFIQEIIDAL TAVPEVWSKTALLINFDENDGYFDHMPSPSAPSRLKNGQYAGKSTLSNADMQDEYFDHAA PEGSHSQPTPDGRVYGPGPRVPLYVISPWSRGGWVNSQVFDHTSVLMFLEKRFGVKEPNI SPYRRAVCGDLTSAFNFKTPNADVLPQLSGKQTRLQADALRENQEALPAVPVPTDIKLPI QQSGIRLSRALPYELHTSARCKADGKVQLIFSNTGKQAAVFHVYDKLNLDRIPKRYIVEP NKTLDDEWDALNDNLGRYDLWVLGPNGYHRHFKGDAQRIIDSGVKPEIRVCYDIANGDVY VELMNEGTKDTILTVKPCAYRQDAPLQLTVKAGQVVKQHWSLADVGHWYDFEVTSESDPY YYRRFAGRVETGEDSFSDPAMI >gi|333032500|gb|GL891926.1| GENE 11 13246 - 15282 1940 678 aa, chain - ## HITS:1 COG:PA1532 KEGG:ns NR:ns ## COG: PA1532 COG2812 # Protein_GI_number: 15596729 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Pseudomonas aeruginosa # 2 360 3 360 681 416 57.0 1e-116 MYQVLARKYRPRNFNELVGQNHVSRALSSALERGRLHHAYLFTGTRGVGKTTIARILAKC LNCETGVTSTPCEVCATCKAVNEGRFIDLIEIDAASRTKVEDTRELLDNVPYAPTQGRFK VYLIDEVHMLSTHSFNALLKTLEEPPEHVKFLFATTDPQKLPITVISRCLQFTLRPLAVD EITKHLGAILEKEQIAADQDAIWQIAESAQGSLRDALSLTDQAIAYGQGAVHHQDVKEML GLIDRTIIYDLILAVHQNQREKVSQLLLQFRYQALDVSLVLDQLISTLHELALLQYLPEL GLKYSEEINAKILQLSKLISAQDLQLYYQIACKGRSDLQLAVTQEQGFEMCVLRLLAFRP LAPNEILVSEPVQQNGQAEVGLNSQAQTAQVIAPVSAVQPVEVISQPAMVEPEPEPEPEP DQDLMVFDPNHHELIGLESAVVQETVSVLEEDFIPVPEQKLVQVQAETQVKQIEPEPAST AEPIGLFEASSAEFSLAQDTSAYDLVSEPVIEQQSLVQVEIVETVVVVKEPNATDNSQLM PQDILKLPSQTLEGEWTLEKWEFWFRNSQLSPAVQELAQHGVMTGEIGGNTVFHIPQEYE NMLTQLQQALIEALKQQWPNTQFTVEYGAVNTATPYVMQSVRKEKAFHRATELLQQQPVI KSLIETFDGELQNIQLKP >gi|333032500|gb|GL891926.1| GENE 12 15456 - 16934 1419 492 aa, chain - ## HITS:1 COG:STM1574 KEGG:ns NR:ns ## COG: STM1574 COG0477 # Protein_GI_number: 16764918 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 1 489 1 491 495 444 55.0 1e-124 MQKKWLILTIIVLIYLPVTIDATVMHVATPSLSAALNLTANQLLWIIDIYSLIMAGLILP MGALGDRIGFKKLLFIGTAVFGVGSLAAAFSPTAYALIASRAVLGLGAAMLIPATLSGIR NAFTEEKQRNFALGLWSTVGGGGAAFGPLVGGFVLEHFHWGAVFLINIPIILVVLVMIVM IIPKQQEKTDQPINLGQALVLVVAILSLIYSIKSAMYNFSVLTVVMFVVGISTLIHFIRS QKRATTPMIDLELFKHPVISTSIVMAVVSMIALVGFELLLSQELQFVHGFSPLQAAMFII PFMIAISLGGPLAGICLNKWGLRRVSSLGILVSALSLWGLAQLNFSTDHFLAWTCMVFLG FSIEIALLASTAAIMSSVPPQKASAAGAIEGMAYELGAGLGVAIFGLMLSWFYSRSIILP AELPSNLIEKASISIGETMQLASNLENPLGGQLVVVAQQAFSYAHSWVLTISAICFFLLT VFVWFSFPKKVN >gi|333032500|gb|GL891926.1| GENE 13 17060 - 17638 524 192 aa, chain + ## HITS:1 COG:STM1575 KEGG:ns NR:ns ## COG: STM1575 COG1309 # Protein_GI_number: 16764919 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 192 1 191 192 196 53.0 2e-50 MAYLNRDQRREMILQAAMQIALAEGFTAMTVRRIATEAQTSTGQVHHHFSSASHLKAEAF LKLMEQLDEIEQTLQTTSQFQRLFILLGAENIDRLQPYLRLWNEAELLIEQDIEIQKAYN LAMQSWHQAIVQSIECGQKEGEFKNRSNSTDIAWRLIAFVCGLEGIYKLGLQGLVEEDFK RHTEAIIRLELL >gi|333032500|gb|GL891926.1| GENE 14 17686 - 18945 1413 419 aa, chain - ## HITS:1 COG:MT1545 KEGG:ns NR:ns ## COG: MT1545 COG1680 # Protein_GI_number: 15840960 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 15 385 25 377 428 197 35.0 2e-50 MIKEILLADTHNYHGILDERFIDLAHQFSRLQDARTGQGGAALAVYFRGQKVVDIYTGLK SQTEAWQPDTLAVCYSTGKGVLATLAHILVSEGFLEYDKPIATYWPEFAQNGKEQMTLRH VLSHQSGMFDVRNIIESAREMLDWSHMLNVIAATKPRFLAGEGNAYQALTFGWLVGGVLE KATGQSLDQLMQKYLVEPLQLDGAYFGTPASELDRVARLIIQPKPEKPAAPQVEKPKKPQ ARKSSLSEKMITWTGQDPQDFQDAMIPKGMKHFSFFSDEGLQAVIPAANGTFTANSLAKI YAMLANQGEWDGQQLIRPEIFKELSTIQSYARDRVMPIPMNWRLGYHRIITMGKRAKNGF GHIGYNGSGAWCDPERDLSFAYTHNFQIGSITGDYRLWGLTQEALRCTDQILKGRKGWF >gi|333032500|gb|GL891926.1| GENE 15 19017 - 19871 991 284 aa, chain - ## HITS:1 COG:PA4788 KEGG:ns NR:ns ## COG: PA4788 COG2030 # Protein_GI_number: 15599982 # Func_class: I Lipid transport and metabolism # Function: Acyl dehydratase # Organism: Pseudomonas aeruginosa # 46 279 43 278 285 163 39.0 4e-40 MNTRHFSQLPKAALAYPKVVQGLIFKKPKGPKILPQVEYVVDTLEIDQNHLKAYNEVCGF QNNGFVPAIYLAVLSQSLQMHMMTAEAFPFPILGLVHIRNQIKQTRPIGVTEKLTLSCKF GELKPHDKGVQFDFITTAKVGNEVVMEGLTTYLSRQKVEKRVGEKAKEEQAPSYVPKAEW NILENTGRRYAKVSGDFNLIHIHAITAKAFGFKQAIAHGMWSKAKALANLELPNAYEADV WFKLPMFLPSKVEFLTANADKKTDFLIRNAKSQKPHVAGTVKAL >gi|333032500|gb|GL891926.1| GENE 16 19946 - 21337 1842 463 aa, chain - ## HITS:1 COG:RSc0536 KEGG:ns NR:ns ## COG: RSc0536 COG1028 # Protein_GI_number: 17545255 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Ralstonia solanacearum # 1 463 1 470 470 442 56.0 1e-124 MTDQYQAFTQSPIGKFVVKNLGLPSPVVLERFESAQPVVKGAVLVGAAPSSVLSGAIAQV LSNIHTDSYVGNNVALQQEAAKVGLNLRPFNAGDKESKFKAVVFDASGIQNSEQLNELYK FFNPIARQVATSGRVIVIGTTPETAKTVKQAIAQRALEGFIKSVGKEFKKGITAQVVYVD EGAAANLESTLRFLLSPRSAYVSGQVIRVSKADVVDVDWAKPLAGKTALVTGASRGIGEA IAHVLARDGAHVICLDVPQQQADLDRVAADIGGSTLAIDITAADAGEKIKAAAAKQGGLD IIVHNAGITRDKTLANMKPELWDLVININLSAAERVNDYLLENDGLNANGRIVCVSSISG IAGNLGQTNYAASKAGVIGLVKFTAPILKNGITINAVAPGFIETQMTAAIPFAIREAGRR MNSMQQGGLPVDVAETIAWFASTASTGVNGNVVRVCGQSLLGA >gi|333032500|gb|GL891926.1| GENE 17 21573 - 23141 1764 522 aa, chain + ## HITS:1 COG:PA4785 KEGG:ns NR:ns ## COG: PA4785 COG0183 # Protein_GI_number: 15599979 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 99 522 4 425 425 567 69.0 1e-161 MSKTTQENPAVENSAQEKVSNTSKSASNTAKHNSTTPKAATNTPKTTRTRSTTAPARSPR SKSAASATPSTSSNVAAAPKATKTKTSVQQDKTMSQNTVRRVAILGGNRIPFARSNTAYF KASNSDMLTAALNGLVERFNLQGKRIGEVVAGAVLKHSRDFNMTREVVLSTDLAPETPAY DIQIACGTGLQAAFVVANKIALGQIDVGIAGGVDTTSDAPIAVGDGLRKVLLELNVAKTG KDRLKALTKIDFKKLLDAPSNGEPRTGLSMGEHQAITALEWGITREAQDELAASSHQKLA AAYERGFFDDLMTPFLGLNRDNNLRPDSTVEKLAKLKPVFGKGETATMTAGNSTPLTDGA SVVLLASEEWAKENGHEVLAYLSFSETAAVDFIGKSGPKEGLLMAPAYAVPRMLKRANLK LQDFDFYEIHEAFASQVLSTLKAWEDEKFCKERLGLDAPLGSIDRSKLNVNGSSLGAGHP FAATGGRILATAAKLINEKGSGRALISICTAGGEGVVAIVEK >gi|333032500|gb|GL891926.1| GENE 18 23207 - 23719 462 170 aa, chain - ## HITS:1 COG:PA2880 KEGG:ns NR:ns ## COG: PA2880 COG4125 # Protein_GI_number: 15598076 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 31 168 28 165 171 110 34.0 2e-24 MKEPDWINQNYKNKMHIIQVIIEYLKMLISKRRLIHAISYEGILLVIIAIALSFIFDMPM EVTGTLGVFMAVVSVFWNMIFNHYFEKVEHKFNWERTISVRILHAIGFEGGLLIATVPMI AYMMQMTVIDAFILDIGLTLCILVYTFIFQWCYDHIEDKFFPNAKAASLH >gi|333032500|gb|GL891926.1| GENE 19 23732 - 24625 804 297 aa, chain + ## HITS:1 COG:PA2758 KEGG:ns NR:ns ## COG: PA2758 COG0583 # Protein_GI_number: 15597954 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 285 1 287 295 153 35.0 5e-37 MNINQEQLLMFQAVMETGSFSAAARKLGKVPSAVSMSIANLEIDLNLTLFERKGREPTPT AEARVLYEKTAQLLIEMNQWKQHAHALSTGLEPNLTIVVVSELLHTNWTDYVCLLESRFP DLQINIVSAPQEDALQMLLDGSAQLALMFEREHLDNREQFVELKREALIPVISKTHPLAS QEHVSYEQILGTRQIVVASRDETLKPELLFSKHYWRTDNHHSACLMILRNLGWGVLPQEM FKENPELNNKLKALDVFDFTPRFEYYVDLVWSRESELGAAARFLIDYIRNKRMQPTP >gi|333032500|gb|GL891926.1| GENE 20 24756 - 25745 1167 329 aa, chain + ## HITS:1 COG:all2563 KEGG:ns NR:ns ## COG: all2563 COG0176 # Protein_GI_number: 17230055 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Nostoc sp. PCC 7120 # 1 308 1 310 332 313 55.0 2e-85 MTHTALDQLKTLTTVVADSSDLEAIRKFRPLDATTNPSLITAAAEQPESKELIEDAYYQA KEEGYKNDELIERTIDILTVKFGVEILKLIEGRVSTEVDAALSYDTEATIQKAHELCELY KGYGIDQSRILIKIASTWEGIQAAKVLEAEGIACNLTLLFGLHQAQACADAKVTLISPFV GRILDWYKKAEGVDSYPIEKDPGVVSVKKIYTYYKQQNIPTQVMGASFRSIDQVLGLAGC DLLTISPSLLTQLEQDTRTVDAALDANKAKQAEAIVRPAQDEQSFKDELNHDLMAFQLLQ GGVDGFIKARDQLSLLLRQSFGIDAEIKS >gi|333032500|gb|GL891926.1| GENE 21 25818 - 26468 660 216 aa, chain + ## HITS:1 COG:PA4757 KEGG:ns NR:ns ## COG: PA4757 COG1280 # Protein_GI_number: 15599951 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 2 216 4 215 216 194 51.0 8e-50 MFGITDLTTYIIGTFLIVLLPGPNSLYVMSIASRYGIKTGYMGALGIFTGDLILMLCTVL GAASLLKAFPWVFIVLKLVGALYLSYLGFKLLQGSIQRWKLRNQPQAEMADLPALDKVHP YKTALSISLLNPKAILFFLSFFVQFVEPDYAYPALSFLILAVILQIISFSYLTALIFSGI KLSTFFKQNHKIAASGIFLVGILFFGFGLKLATSTM >gi|333032500|gb|GL891926.1| GENE 22 26505 - 26978 509 157 aa, chain - ## HITS:1 COG:RSp0645 KEGG:ns NR:ns ## COG: RSp0645 COG1522 # Protein_GI_number: 17548866 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 15 149 43 177 186 125 43.0 4e-29 MDEQAENLTPLELKIMRCLQENGRLSNAELAKLVGISTSSCWNHTQRLFKIGAILDVRAR INPGMVQRETIVLVGVVLDRSTPDSFQAFEQAAGDLENVLECYLVAGEVDYFLKIRVKDL AAFNRFHSEKIIALPGVRQVRTFFVLNEVKTDGMLAF >gi|333032500|gb|GL891926.1| GENE 23 27165 - 28337 1075 390 aa, chain + ## HITS:1 COG:ydcO KEGG:ns NR:ns ## COG: ydcO COG3135 # Protein_GI_number: 16129392 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Escherichia coli K12 # 11 390 96 475 478 271 42.0 1e-72 MQKILQDFSIPAVFAGFITFLIGISVSAILVIQAAQALGASSEQITSWFWALGLGIGLSG LILSRKFKYPVATAWSTAGLALIMATGSGYSLNEAIGAFLVGGLLTAILGFSGIFQKALS YIPQSLTSAMLAGVLLKFGISLFASLQNDWIFVLSLLAIYVITKRLWPRYSIVFTALAGI ALCPVFLNFHMPTLEWSLAKPVWISPEFSWSALLGLALPLFVISMVSQYLPGIAMIKSYG YKPHVNQLIGWTGLTQVVLAPFGCYSVNIAAISAAVSLDDQVHPDPSKRYIAGISCGFFY VLMGLFAATLTSLLMSFPHIFIVALAGIALLGTISHNIALAFGPVEDREAALFTFLCSAS GIQFFGVGSAFWGLIVGIVVFIVLKFKAKK >gi|333032500|gb|GL891926.1| GENE 24 28411 - 29130 799 239 aa, chain - ## HITS:1 COG:RSc1461 KEGG:ns NR:ns ## COG: RSc1461 COG1285 # Protein_GI_number: 17546180 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Ralstonia solanacearum # 1 237 1 238 240 211 50.0 1e-54 MKLQFLQHTDLSNIIDTLISLSAAFILGALIGFERQYRQRTAGLRTNVLVAVGAAIFVDI AINLTGADGAVRVIAYVVSGIGFLGAGVIMRQEGNIHGLNTAATLWCSAAVGAAAGADLI IEAILATAFILSANTLLRPIVHIIDRRPLDDDTEVLHVIYIICDRSQSKVVMDELNLTLK HHNYPAKDIDVTPFGEKEVEIEVTLIATSIEAEEAQHIINHLNAMPQIRQAFWDKNTIN >gi|333032500|gb|GL891926.1| GENE 25 29146 - 31902 2512 918 aa, chain - ## HITS:1 COG:ECs5219 KEGG:ns NR:ns ## COG: ECs5219 COG0474 # Protein_GI_number: 15834473 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Escherichia coli O157:H7 # 32 918 27 898 898 1085 61.0 0 MKFWQRLFTSFLQRFHLMRFFGRNRSFKELHQSSYAQEISKNLSKRLLNASRAQTNDLLK QFDTHLTGLTEEQAHTQQMTVGLNEVTHEKPLTWWQHLWYCYRNPFNILLSLLALIAFFT DDLTGSTIISVMVILSTLLRYWQEAKSNQAADALKVMVSNTATVLRHQVSAEDLELMHER YGIDTKNQTTHQFEIPIQYLVPGDVILLSAGDMIPADCRILSAKDLFVSQAAMTGESMPV EKFPLQKNLEETSALELDNIVFMGTNIVSGSAQAVVLSTGIQTYFGALAHRVTATDRSTT AFQMGVNKVSWLLIRFMLVMAPVVLFINGFTKGDWAEAFLFALSVAVGLTPEMLPMIVTS TLAKGAVFLSKKKVIVKRLDAIQNFGAMDVLCTDKTGTLTQDKIFLSQHIDVQGGKSDFV LMQAFLNSYYQTGLKNLLDVAVLEAVDDQIKIQKLRYKKLDEVPFDFDRRRMSVVVQTPQ QKARMITKGAVEEMLKVCRYVEVNGKVEPLTKQCEVAIEALTQRYNRDGLRVVAVAYREF KNHQENYSVVDESDLILIGYITFLDPPKESAKEAVQSLHAHGVTVKVLTGDNEFVTQKVC REISLNYDQVLLGGVIETLTDQQLKRAVEQYHIFAKLSPVHKERIVEQLKANGHVVGFLG DGINDAAAIRAADIGISVDTAVDIAKESADLILLEKSLMVLEKGVIEGRRTFANMLKYIK MTASSNFGNVFSVLIASAFIPFLPMLPIHLLIQNLLYDVSQIVIPFDNVDEELIAKPQRW QPEEVGRFMVVFGPISSIFDMITFGLMWFVFSANTPEHQTLFQSGWFMVGLLTQTLIVHM IRTAQIPFIQSRAATPLLIMTAVIMCIGIFLPMGPLASYLKLQALPLSYFLYLPVILGAY MCVTQWVKKIYIRRYGWQ >gi|333032500|gb|GL891926.1| GENE 26 32003 - 32164 79 53 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02263 NR:ns ## KEGG: ACICU_02263 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 53 1 53 53 77 100.0 2e-13 MFLYASIHDRYIYQILILVNNSSHAIQSIRTMFSYVTFRQRWSGFGLIFSSSS >gi|333032500|gb|GL891926.1| GENE 27 32466 - 32909 483 147 aa, chain - ## HITS:1 COG:VC0842 KEGG:ns NR:ns ## COG: VC0842 COG1714 # Protein_GI_number: 15640859 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Vibrio cholerae # 7 145 21 151 157 90 43.0 1e-18 MTYKYEYAGFWLRFGAMIIDTLILFLAIIPAAWIFYHGDYDLIFATGMSSKPQNYWFDMI VNYAFPFLYTVLCWIYFAGTPGKRLMRLKVLDEKTGNKLTFIQSLIRYIGYIPSILVFCI GLIWVAFDAKKQGWHDKMAKTVVVREL >gi|333032500|gb|GL891926.1| GENE 28 33182 - 33355 200 57 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001405 NR:ns ## KEGG: ABBFA_001405 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 57 1 57 57 62 100.0 5e-09 MPSISVILFYILAILGFCSAVGGLLSLSMFLIIIGIGLICAAFLLKKEFKIDVLFWK >gi|333032500|gb|GL891926.1| GENE 29 33534 - 33761 272 75 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001404 NR:ns ## KEGG: ABBFA_001404 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 75 1 75 75 115 100.0 8e-25 MADLTAKKVSKLIEEFRQTGKEPEKLVIGYKTYARLMADDKFAEKVVPSLENSKDRLYKN LKIKLITEKHYFEVK >gi|333032500|gb|GL891926.1| GENE 30 34050 - 34493 675 147 aa, chain + ## HITS:1 COG:MJ0531 KEGG:ns NR:ns ## COG: MJ0531 COG0589 # Protein_GI_number: 15668711 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Methanococcus jannaschii # 3 147 26 166 170 89 36.0 1e-18 MNYRHIIVPVDGSEISLAAARQAAHIAKAFGSKLTAISLVAVDPFSGVDFYYISPVVKDY FVEARANAEKTLAKVKALCAEEGVDIETQIIQGEISSDGILKAVEELGSDLIVIGSHGRK GFQKLILGSFAQDVLNSTKIQVLVVKE >gi|333032500|gb|GL891926.1| GENE 31 34753 - 36336 1221 527 aa, chain + ## HITS:1 COG:CC2587 KEGG:ns NR:ns ## COG: CC2587 COG0488 # Protein_GI_number: 16126825 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Caulobacter vibrioides # 18 520 17 519 535 218 30.0 3e-56 MTQQACVISQLTLEFPSKVMFKELNFSLEHHQVSALIGRNGQGKSLLMQLLHKISPTTEM HISGQINWQTNHAYLSQLTRLQSDTIAEALEVNHLYNAFQRVEQGEARYDDYDLLEGHWD LPNIWEALLRSAQLPTDLDFPVKQLSEGQKTKLALSALFLKTDHYLLLDEPSNHLDQEAR QWLIAQLKKHPVGALIISHDLTLLNEVDHIYHLNEHGLQHTTGNYEKFYAQYQSQIEALE QSVHQHQREVKHMKQKQHEVLMKAQKRERAGNKLRDSNSQAKILLDFKKEQAGQSLGAIH SQHQRQIDQSQQDFNSKKVLLETVKPQQFIFPSFNKRTGEILRIDNLKLNYGTQQPIHLA LRACQKIHLVGRNGIGKSTLLKQIDQSAVTATDEIKLFANCFYLDQNFSFLLDHLSAVEN LRNINPNISELEWRNLLGQLRIRGDKSTYPLAQLSGGEKLKVALLGLSHAQPMPELLLLD EPENHLDIESRELFANAISSYEGSVLLVSHDLSFVEKCGIVDSIYLN >gi|333032500|gb|GL891926.1| GENE 32 36410 - 36835 446 141 aa, chain - ## HITS:1 COG:no KEGG:A1S_2074 NR:ns ## KEGG: A1S_2074 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 13 141 1 129 129 233 97.0 1e-60 MKKSIKILLLSSLISSIPLSVIAKNVETKVSFLKGSSQTTLTGKFQGYDDVRYRVFAKSG QILKFNINSYGNLAYINIFAPGQKPGKDKPLFVGSTVGFSGEVTLPVDGDYIVQVYQMKK SAQRNRAVSFNLDLQILDNKK >gi|333032500|gb|GL891926.1| GENE 33 37257 - 37388 145 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTKIIATLGLAAIVSLSVAACQGENDTKQQDKTTTPHSMDKDS >gi|333032500|gb|GL891926.1| GENE 34 37568 - 38623 1147 351 aa, chain - ## HITS:1 COG:RSc3350 KEGG:ns NR:ns ## COG: RSc3350 COG3047 # Protein_GI_number: 17548067 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Ralstonia solanacearum # 114 351 61 241 241 90 27.0 4e-18 MSYAEGVKRFSVSAGWLHVMPQGKANPFNINTSVKNGTVAKVGSISPTSFLNSVDPNATE VDVGGEPFNQKEFLELALNDDFLKGLLLDEEGNIKPEVAGEATIQGLEQWHQNDAGLEVD DTDTLGLMFNYYLNDNVSLQFIGGIPPKVDIKGQGEILAPLSGVALSPHELVKILFPNGI TLGQAVPITNLGNKPKAASVRAWTPAIEAQYQFGKSGVNKFRPYLGVGLMYAHFNDIKLN DEIRSDLISAGHMIQNVLDGKAGAALDRKESSGNMVVKVDADDAIAPIFTAGFTYDFNDS WYTVASVSYAKLNNRTKIDVINQNTGARLIHGSTKVDIDPIITYLGVGYRF >gi|333032500|gb|GL891926.1| GENE 35 38985 - 41141 2172 718 aa, chain - ## HITS:1 COG:ECs1480 KEGG:ns NR:ns ## COG: ECs1480 COG4773 # Protein_GI_number: 15830734 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid # Organism: Escherichia coli O157:H7 # 13 718 21 729 729 489 38.0 1e-137 MQRTTKHFQINALALAIAMSTISAHAETDQQTSEYGTLPTIKVKAGSGQENEKSYIAGKT DTAVPLGLSVREVPQSVSVITQQRLQDQQLSTLVEVAENVTGVSVNRYETNRGGIYSRGF VVDNYIIDGIPTTYSLPWSSGEIFSSMALYDHIDVVRGATGLTFGAGNPSAAINMVRKRA TSTEPTANVEVSAGSWDNYRVMGDIANSLNQSGTVRGRAVAQYEQGDSYTDLLSKEKLSL LLSAEADLSENTLLSGGVTYQEDDPRGPMWGGLPVWFSDGTKTNWSKNITTSADWTRWNV KYTNLFADLTHKFNDNWSAKLSYSHGKRDANSKLLYVSGSVDKNTGLGLSPYASAYDLEV EQDNASLQLNGSFDLWGLEQKVVLGYQYSNQDFTAYARSTDTKMEIGNFFEWNGSMPEPV WNAPTLNEKYNIEQNALFAATYLNPIEPLKFILGGRFTNYEKNIYGRSSSIKYDHEFVPY AGIIYDFNDVYTAYASYTSIFQPQDKKDFDGNYLDPVEGNSTEVGLKSAWFDGRLNGTLA LYHIKQDNLAQEAGDVTRNGVKEIYYRAAKGATSEGFEVEVSGQITPDWNITAGYSQFSA KDTNDVDVNTQLPRKMIQTFTTYKLSGKLENITVGGGVNWQSSTYINAENPKEVIEKVEQ GDYALVNLMARYQITKDFSAQLNINNVFDKKYYGVFPAYGQITLGAPRNAALTLQYKF >gi|333032500|gb|GL891926.1| GENE 36 41334 - 41840 490 168 aa, chain + ## HITS:1 COG:BMEI0466 KEGG:ns NR:ns ## COG: BMEI0466 COG3153 # Protein_GI_number: 17986749 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Brucella melitensis # 5 166 8 169 169 189 55.0 3e-48 MNIFIRDEREEDIKEIEELTKAAFLNAEHTSHTEHFIVNSLRKHKQLTVSLVAVEDNTIV GHVAISPVQISSGEKNWYGLGPISVAPNKQGQGIGSLLMNSSLEKLKKSGAKGCVLLGDP KYYSRFGFKAYPDLKLPGVPPEYFQALSFQNYVPKGDVSYHEAFNAQD >gi|333032500|gb|GL891926.1| GENE 37 41873 - 42256 204 127 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02274 NR:ns ## KEGG: ACICU_02274 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 127 1 127 127 224 100.0 7e-58 MKRLIILFLLAYATSSFAQVPFEVSKSCFVVNGRNITEPCLLSSTNNSTSNFERLTFANT KVFIKESNICSNNDSCVSVGSNLSNLKDATIYYRDLKTKKIIEKPEKDSWTCFKQPIDKL DFCISYN >gi|333032500|gb|GL891926.1| GENE 38 42431 - 42712 209 93 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1490 NR:ns ## KEGG: ABAYE1490 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 93 1 93 93 187 100.0 1e-46 MKCSYQDLDGNIVELTCESYIHIPSGASGNKLGIDNRAEDLIHITEDFSFFKKTEADSIP LYRFAVDANYNVFNSDELPALAQIGTDWKVLNE >gi|333032500|gb|GL891926.1| GENE 39 42901 - 43371 304 156 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1489 NR:ns ## KEGG: ABAYE1489 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 156 33 188 188 275 98.0 3e-73 MPKFLIIAEKVYKKLEEDKLFSDNLIEQLNNLVSIIRKEIKGTPCKLKYNFIDFEECLSK PLSECTIKLDMSLMPKYKNKGEYIMWLASFIERITVGGQPKLPPLSSIVPADFNVKKEAQ TIVENKKSVSEENAKMIVNYFNSEEYQKNNKKINLV >gi|333032500|gb|GL891926.1| GENE 40 43784 - 44035 247 83 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001392 NR:ns ## KEGG: ABBFA_001392 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 83 1 83 83 123 100.0 2e-27 MATAIENRARQLKNAKRGGYAPTIAKDVNKHKVQKIRRALDEARRYVSELNDETVIFDDQ DARQKAEGAKAIIEMFEAALSGA >gi|333032500|gb|GL891926.1| GENE 41 44334 - 45569 1116 411 aa, chain - ## HITS:1 COG:BMEI0944 KEGG:ns NR:ns ## COG: BMEI0944 COG0668 # Protein_GI_number: 17987227 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Brucella melitensis # 17 411 8 404 408 417 51.0 1e-116 MDFFNFYRDLQAELSNYPWLEMLVSLTLLILFAALANFIAKRIIVRGIRHLVTKIKSLNQ SVFAQHSVIKRFANIVPAIVIMNGITTVPHLSEKAVALVQMGAQAFIFLTIALTISELLN IFNLIYQRNPKSRNKPIKGYLQLVKLIIFVVCGLMILGTFLKKDVFTLLAGFGAMAAVLM LVFQNTILSLVASVQIASYDMVRIGDWIEMPSLNADGDVIDISLHTVTVQNFDKTYTTIP TNKLVTDTFKNWRGMSNAGCRRMKRSLYIDQTSVHFMTEEEQQKLKDFLLLDQYLNAKQS EIDEFNKHLGSQSRYNKRRLTNIGTFRAYVEFYLRQHKGIAQNQTLIVRQLQPTSEGLPL EIYAFTNTTAWVSYEAIQSDIFDHLIAILPEFGLRVYQAPSGHDFQKLTVE >gi|333032500|gb|GL891926.1| GENE 42 46019 - 48289 2031 756 aa, chain + ## HITS:1 COG:PA1365 KEGG:ns NR:ns ## COG: PA1365 COG1629 # Protein_GI_number: 15596562 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 38 756 107 813 813 788 55.0 0 MGNKIKSNKLFTRKSEAKNIIPLLSLGGAIFLSNSAFAASPSETTDAEKKPEALPTITIN ASRADELSTSAKQVTKLDEKQIELLRNGSSGNIATVLAKAVPGLSDSSRTITDYGQTLRG RNALILVDGVPMNLTRDTSRGLSAIDPESIANIEVIRGSNAIYGGGASGGIISITTKAAG SEPTAKTVVGLQTPLTNFRSNALSGDIHQYFTGSFNAFDYALDFGYQRIGSPYDASGDRV APEPSQGDLYDSDGYSIGGKLGYHIDDNQYVQFAANYYNAEQDSDYASDPSVKNAPAGTV PAKAIKGLKLKDQNKNENQIYNLTYNHKDFFGNKVDAQIYYRDFFTRFSPFDARKNPNRG GNVDQIYQENNILGSRLTVTTPLEFLGDTSLVWGGDFSREKSEMPLDTFNPDIYDQSGGL DFVKTGKLIYLPELTTQSVGGFVQLKHRFNDQWSAEAGTRYEDSYAQIDSFIPLSQFDPK TQSYKPNPYVYQGGKVKADAWLYNANVTFSPNDQHSIYASFNQGFQLPDVGVIIRNADNT DKEKNYELSSSFLEPVKVDNYELGWKGNFNNFSSSLAVFHSTSDLGAVQSFSNGLALTRT KEKVTGLEATFDYLDDANVWGTGGSVTWMKGREKPQNGAEQDMTGFRIPPLKLTGYISYS PTETWTNRLQATYFGSEDYRLNGKNSFGRYDVKSYTTADLISSFALNKKDTMTIGLENMF NRKYYPLYSQLLRTSDNTSHLVANGVTLKVTYSHKW >gi|333032500|gb|GL891926.1| GENE 43 48352 - 48906 289 184 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02280 NR:ns ## KEGG: ACICU_02280 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 184 1 184 184 330 100.0 2e-89 MPNLEASFRALRVLHTARDLFKQYGFHKVGVDRIIAESKITKATFYNYFHSKERLIEMCL TFQKDGLKEEVFSIIYSYRELMVFDKLKKIFFLHANLEGLYRLPLQAIFEIEKFYPTAYK VVVDYRNWLVIQIHQLLLTIKATATLEDAYMFLFVIDGAMVQLLSKDRIDERDKLLDYFL IMMS >gi|333032500|gb|GL891926.1| GENE 44 49838 - 50212 250 124 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1480 NR:ns ## KEGG: ABAYE1480 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 124 1 124 124 224 99.0 6e-58 MTNTFNNFVGEIMRNFLVTIFTLLVGTSIYASQESRNLLEQTQCEKAVELHGFLSRAQLD CNYHYYSEELKEAAAKCTKHDLGEKYGREVMKFGMKEFEERKKEDTQGHFCHKVLKEFPK YIKQ >gi|333032500|gb|GL891926.1| GENE 45 50774 - 51271 443 165 aa, chain + ## HITS:1 COG:AGl132 KEGG:ns NR:ns ## COG: AGl132 COG1522 # Protein_GI_number: 15890173 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 154 1 135 160 160 57.0 8e-40 MVYILNSTEYALDRIDRKILSALRRNGRLTVAQLAEEVGLSSSPCWTRLKRLESLKIIEG YTVNVNPKAIGIHELFFIEITLERHDDEMLENFSEALADIPEVVEAHLVTGDYDYLVKVA VKDAEHYERFLRKKLYSIKGIRHTRSTFALRPLKSANTADLMLIE >gi|333032500|gb|GL891926.1| GENE 46 51300 - 51857 565 185 aa, chain - ## HITS:1 COG:YPO1353 KEGG:ns NR:ns ## COG: YPO1353 COG1605 # Protein_GI_number: 16121633 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Yersinia pestis # 23 184 23 186 186 157 53.0 1e-38 MLNIKNIQQTVKVATTVAALMCFSSLAQAYQYEQTARLINERLSYMKDVAGYKAEQHLPI EDLTQEKKVLDQSLSEADSFGLNSETVKPFIVVQMDVAKAIQYRYRADWLSSPETNWKPQ DLSEVRLKISALNTELLKNIAYELKKNNNKAPHGCSYMWPVQHPQLKEADKRALCVTLNK IKLKQ >gi|333032500|gb|GL891926.1| GENE 47 51935 - 52618 362 227 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02285 NR:ns ## KEGG: ACICU_02285 # Name: not_defined # Def: oxidoreductase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 227 1 227 227 421 100.0 1e-116 MLKTIFQKFQKKQGCVVIAGHDIELLDQNFVILDKNEQSPLHVYQAVHDSSVQNIQVNRG NDGITSVRLNLVNTEHLKSLLKYIASHSHNIELCVFQPNFSSAPNIEALSLEEIEHSWQT TGLSAVSVSQAVIKPMLKQQRGTVIFLGAPSNNSAHYDVLSQSMFASIRALSQSLAREFQ PKGIHVTYCMVEKWDGQNQHFISSVKQVCQHIYQQPNTAWSQELSVS >gi|333032500|gb|GL891926.1| GENE 48 52628 - 53389 608 253 aa, chain - ## HITS:1 COG:PA0117 KEGG:ns NR:ns ## COG: PA0117 COG1028 # Protein_GI_number: 15595315 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 15 253 7 242 242 152 36.0 5e-37 MASATPDKIRDCAVVIGVGASQGIGAAVCHRFAKEGLKVYVAGRTFQKIETVAAKIHANA GEAVAFRLDAEDINQVQALFDTIISQNERITAVIHNVGGNIPSIFLRSPLSFFTQMWQST FLSAYLVSQSCLKIFKEQNHGTLIFTGASASLRGKPFFAAFTMGKSALRTYALNLAQIYK TQGIHIAHVIIDGMVDGDRINKALFGLGRFIRLTRGTGGLNINAIADNYWMLYQQSPELW THELDLRPYQEKF >gi|333032500|gb|GL891926.1| GENE 49 53397 - 54083 801 228 aa, chain - ## HITS:1 COG:alr3798 KEGG:ns NR:ns ## COG: alr3798 COG0625 # Protein_GI_number: 17231290 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Nostoc sp. PCC 7120 # 6 195 4 194 263 85 31.0 5e-17 MSDIILHQWEISPFCQKVARALKFKGIPYETINYNGILGAKVPLLSKVGKVPVIDHKGQR IQDSTRIARYLDETFPDTPRLYPEDANQKALAELWEDWADESLYFYEVYLRVNDSEALEE AIRISSIGRPAYEKPMVKGFILAELKTQLFFQGLGRMKAENVEEEFIRHLDRVEQVLSQS EWLVGENQTIADIAVVAQLGEVIRTSKKFGKEILDRPFMAEWYKKQTG >gi|333032500|gb|GL891926.1| GENE 50 54273 - 56879 3188 868 aa, chain - ## HITS:1 COG:PA3083 KEGG:ns NR:ns ## COG: PA3083 COG0308 # Protein_GI_number: 15598279 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Pseudomonas aeruginosa # 13 849 7 866 885 702 45.0 0 MNIAAQPPVQADQTVYLKDYQKPAFLVESINLDIQVYDDKTIVDSTLVMKRQTAGDLVLL GRDLELQSIQLNGQDLTPAQYSLDSEQLVITDAPDEVILQTQVIIHPETNTQLEGLYKAG DLFVTQNEPEGFRKITFYPDRPDVLSVFTTRVEADKKYPVLLANGNLLETGEVGENRHFA IWQDPTKKPSYLFACVIGDLAVLKDRYTTSEGRDVALEIYAIEKDIPKCHIAMEALKHSM RWDEEHYGRAYDLDNYMIVAVSQFNMGAMENKGLNIFNTSCVLADEEYTTDAAIMRVQSV IAHEYFHNWTGNRITCRDWFQLCLKEGLTVFRDQSFSEDLQSAAVQRIDDVAVLKSHQFP EDAGPLSHPPRPDHFVEINNFYTATVYEKGAEINRMMSTLLGKEKFRQGTDEYFRRHDGQ AVTVEDWVAALSAGSGVDLSAFLTWYNQPGTPKLEAKGEYDAAAQTYRLSFKQSLKAHPK YPNLKAVPIPVALALFNAKTGEQYTLQNESLFVNGVKDGVYLFDQDEATIEFTGVTEQPV VSLLRNFSAPVNLVFDYSDEELAFLIQHETNGFNQWQATQTLLERILLEDHSADTYIQAI QSTLPELVGRDPLLASRLFDVPTEGYLGSRIDQNYAPADIHVKREALLNRLAQELGSFWK DTYLTLDPDLQKEFSLAMGVRALKNIMLMMMARQGDQSAFELAYDQYQSTGNMSERLGAL RVLVWQSAPQAQEALADFYNRFKDEALSLDQWFMIQAANPNATVETIEYLTQHPDYDLTT PNRIRAVSGGLSNNPENTWGFGVAHFINLAEYLDEKNPILGSRLLQVLSRWYTLAEPQRT QVQQALQALQPKVKSKNVSETLNSMLSV >gi|333032500|gb|GL891926.1| GENE 51 57198 - 57455 325 85 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02289 NR:ns ## KEGG: ACICU_02289 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 85 1 85 85 157 100.0 2e-37 MELKAYLHRLENIKAIHDLDAAGLNHHVIAVFLSAEGISMTAQEVTTIVNTYDALGKVKL PNKKVQALINAKKLGQNDETLPCPV >gi|333032500|gb|GL891926.1| GENE 52 57580 - 58764 905 394 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02290 NR:ns ## KEGG: ACICU_02290 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 394 1 394 394 742 100.0 0 MINSNVRSEMALQILQKQLDESSHCPLCQASMYWVDAEQFEQDVQFHECSHCQHRVFKDT KMTCHCETCTKQRKKLLQQTRLQEQRQFKSKDQPQRSLEQLSFLHKLFLLSLLDDYARDD IAHDEYIHWDQIKYQPITPNWMFQNHLIKQLHKDGILNAQDQTDEPQCFYLNIRLDGYSD PSLFSVAQQLRHWFYENLSLGIPFRSADEVKDVLFQVLYQEIIQFSQFYCRTWGIQIAGS SNFQAFCYRLMDSLAIGQIYYLIQTALEYLYKQKALQPRNEKFINTNLLKKTLEQYRERA LTEKWETSMLPRPYNIPYSKMSHILFNRFLGYDEQIFVQPVWKAWRKIEPRLNFYSVKRC MYCGSNDLSVDYDAADYVSLICQNCKHQDHYFTR >gi|333032500|gb|GL891926.1| GENE 53 58798 - 59625 958 275 aa, chain + ## HITS:1 COG:STM2147 KEGG:ns NR:ns ## COG: STM2147 COG2145 # Protein_GI_number: 16765476 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Salmonella typhimurium LT2 # 16 258 16 257 265 155 40.0 6e-38 MTSTSNLIEQVIEAWQNMQAKTPLVQCITNSVAANYTANVLLASGASPAMIDNPYEAESF TKISSALSINLGTPTSEQMQAMQISAKTAQLNNIPWVLDPVGYGPILAWRSQMTDELLQF KPSVIRGNASEISTLAGNQVQSKGVDSTLSSDQAYQQAYALLAHADCIAISGESDYILSN EIDAVIQVNGGSPLQPKITATGCALGALIAAYSAVATPTIAALSAHVHFAIAGKLAANQA QTMGSFSSIFMDYIHMLDDNLIEQYADIKLLNIQA >gi|333032500|gb|GL891926.1| GENE 54 59654 - 60505 724 283 aa, chain - ## HITS:1 COG:STM3175_2 KEGG:ns NR:ns ## COG: STM3175_2 COG3449 # Protein_GI_number: 16766475 # Func_class: L Replication, recombination and repair # Function: DNA gyrase inhibitor # Organism: Salmonella typhimurium LT2 # 130 283 1 154 154 181 55.0 2e-45 MAVYTQKLQLVCDYIQRHLDEDLDVDRLSQIAALSKFHFHRIFAIHVGLNVMKFIQLSRL KRASFQLAFEPDLKIIEIALQAGFDSPEAFTRAFKRSFDQTPRAFRDKPDWESWHQKFVF TIPKSELKMNVNIVERPAEKIAYLSHLGSPDKVLETAAQFIAWRKETGLSPVTKSKTYGI PFADPDQTPADEFRFDIAGSIEKAVPENSYGVQTGEIPAGRYATVRHFGSHDQIKDSVYY IFRNWLPEQPEEAGDYPVFFHYHNFVHEVNECDLITDIYLLLK >gi|333032500|gb|GL891926.1| GENE 55 60587 - 60946 334 119 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1465 NR:ns ## KEGG: ABAYE1465 # Name: not_defined # Def: 5-carboxymethyl-2-hydroxymuconate delta isomerase (EC:5.3.3.10) # Organism: A.baumannii_AYE # Pathway: Tyrosine metabolism [PATH:aby00350]; Benzoate degradation [PATH:aby00362]; Microbial metabolism in diverse environments [PATH:aby01120] # 1 119 3 121 121 224 100.0 6e-58 MPHVVVDYSDNLTGLNAKQLLEEINTTLIETELFSPEDIKSRARRDEVFLIGLGVDQAYI HVKAYILSGRTAEQKQLVGEQLLAALSNKKYLPQEFNKEIQLCVELIDMPRDDYFKQVV >gi|333032500|gb|GL891926.1| GENE 56 60990 - 62702 1699 570 aa, chain - ## HITS:1 COG:SPBC887.14c KEGG:ns NR:ns ## COG: SPBC887.14c COG0507 # Protein_GI_number: 19113280 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Schizosaccharomyces pombe # 15 394 327 764 805 226 34.0 1e-58 MKQETALKLLKAGENVFLTGSAGAGKTYTLNQYIHYLKARKVPVAITASTGIAATHMNGM TIHTWAGIGIKDHLTDDDLKRMKERKYLKEHLENAQVLVIDEISMLHAKQLNLVNQVLKY FKESDEAFGGIQVIVAGDFFQLPPVGRNGEANRDKFCFMSDAWVEAKFRVCYLTEQHRQD DEILNQILNAIRAQSIQTEHLQALHQSRTHDIGETFTRLYTHNMDVDNINYQHLNEIDNE GHQFNAVLDGNEKLLETLKSSVRAPEELTLKKHAKVMFVKNNFDMGYINGSLGEVIGFEE DDENGLLPKVKLTDGTTLLVAPETWSIENEAGKVIASFQQIPLRLAWAITIHKSQGMTLE AAEINLMHTFEKGQGYVALSRLKSLTGLKLLGFNEQALELDSLAVKADRRFQELSKEAED NFADVDLTAQHKAFIRHCGGTLNETEISRNEKKLARGEKQNYASATLDETRALFEEGYEI EDIAHERGLTPATIINHLARLHKEQKLDISVAHPGEEVVEEVRKIYKKLKKRQNPDHFSD DGSIKLRPIVEATSPRMGYDQVRLALLFIE >gi|333032500|gb|GL891926.1| GENE 57 62933 - 64105 1399 390 aa, chain + ## HITS:1 COG:ECs4466 KEGG:ns NR:ns ## COG: ECs4466 COG1454 # Protein_GI_number: 15833720 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 10 390 3 383 383 412 57.0 1e-115 MAFKNIADQTNGFYIPCVSLFGPGCAKEIGTKAQNLGAKKALIVTDEGLFKFGVADLIAS YLTEAGVASHIFPGAEPNPTDINVHNGVNAYNENGCDFIVSLGGGSSHDCAKGIGLVTAG GGHIRDYEGIDKSKVPMTPLIAVNTTAGTASEMTRFCIITNTDTHVKMAIVDWRCTPLIA IDDPKLMIAKPAGLTAATGMDALTHAVEAYVSTAANPITDACAEKAITMISQWLQPAVAN GENIEARDAMSYAQYLAGMAFNNASLGYVHAMAHQLGGFYNLPHGVCNAILLPHVCEFNL IACPDRYAKIAELMGVNTHGLTVTEAAYAAIDAIRKLSSSIGIPSGLTELGVKTEDLAVM AENAQKDACMLTNPRKANHAQVVEIFKAAL >gi|333032500|gb|GL891926.1| GENE 58 64300 - 65268 962 322 aa, chain + ## HITS:1 COG:MT2921 KEGG:ns NR:ns ## COG: MT2921 COG2267 # Protein_GI_number: 15842395 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis CDC1551 # 10 318 4 328 346 174 33.0 2e-43 MNTSIAKHNYAPDILGAGYEQLTLNFPDDYEGKVVATLVRKKATQPTQKAVLYIHGFLDY FFQTEMAEQFNAHGYDFYALDLRKYGRSKLPHQIFYNVLDLNEYDAEITQALEIIGQEKH TQVLLAGHSTGGLTATLYAAHHPDHPLIKALWANSPFYDFNLSLVEKKFGIPMLSRVGKY LPKVKFPSQLNKWYTTSLHKQLKGEWDFNLDWKPTSAPTVQLSFVHAIHTAQKEIHRGVK LNIPALIMHSHQTKNPRKWGPDATQSDVILDVKDIAKFGKKMKGDVSVVSIHNGLHDLVL SAQPVREQVYQQLFQWLDQKVT >gi|333032500|gb|GL891926.1| GENE 59 65265 - 66455 1093 396 aa, chain - ## HITS:1 COG:BH1826 KEGG:ns NR:ns ## COG: BH1826 COG3284 # Protein_GI_number: 15614389 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; K Transcription # Function: Transcriptional activator of acetoin/glycerol metabolism # Organism: Bacillus halodurans # 27 179 20 177 623 69 29.0 1e-11 MFTKKDLLQQRMLIDQLRTQNSLSPQNAAKLGQSIASSWERSASAAIPKERFAAPLLERK SASQNALDLALSQCADDLRHIAEQSSMVIAVGDIGSTIIWTASSAQMQSAAERVHFVQGG QWREEFVGTNALALSLKTQQSSCVFSNEHYMESIHDWVCYAAPIIDPYSKQTLGVVDLST TWKNHNTLGILAAERCASIIQSALLEQQRQHLHIRAFSTPQVKFNGKSLLLTPRQIEILT ILALCPHGLTLEHLYQALYGERKVSMGTLKAEMSQLRDILGGLLGSRPYRLLVHVEADFL QAEQALDAGYVASALQLYTGVFLAKTESPFLCAWRDCLESRLSDAIFKTQETDLLLKHLA HFPEAIDAVERLMELLPSEHPAHQLLVKYIDSPKLS >gi|333032500|gb|GL891926.1| GENE 60 66599 - 68110 1824 503 aa, chain + ## HITS:1 COG:DRA0348 KEGG:ns NR:ns ## COG: DRA0348 COG1012 # Protein_GI_number: 15808007 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Deinococcus radiodurans # 3 503 13 515 515 783 71.0 0 MRYIDPNQPGSKVQFKSQYENFIGGEWVAPLKGEYFDNVSPVDGKAFTRIPRSSAEDIEL ALDAAHKAKASWNKSSPTTRSNILLKIADRLEANLEMLAVAETWDNGKAVRETLAADLPL AIDHFRYFAGCIRAQEGGISEIDEDTIAYHFHEPLGVVGQIIPWNFPILMAAWKLAPALA AGNCVVIKPAEQTPVGILLVAELIQDILPPGVLNIVNGFGAEVGRPLATNPRIAKIAFTG STQTGQMVMQYATENIIPVTLELGGKSPNLFFEDIMDKEDDFLEKTLEGFAMFALNQGEV CTCPSRALVQESIADQFLELAVERVKRIKTGHPLDTETMIGAQASLQQQEKILRCINTGR EEGAELLLGGSGRKEVGDGFYVDPTIFKGHNSMQVFQEEIFGPVLAVTTFKDFDDAIKIA NDTMYGLGAGVWSRSAHISYRAGRAIEAGRVWTNCYNIYPAHAAFGGYKKSGIGRENHKM MLDHYQQTKNLLVSYSTKPMGFF >gi|333032500|gb|GL891926.1| GENE 61 68332 - 69768 1589 478 aa, chain + ## HITS:1 COG:PA4023 KEGG:ns NR:ns ## COG: PA4023 COG0531 # Protein_GI_number: 15599218 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 15 478 18 481 482 598 70.0 1e-171 MNQPETASVISSSAEVSSAEYFAQRQLKQGTVGWLLLIGLGVAYVISGDFAGWNFGIAQG GWGGMFIATALAALMYLCLCLSMSEMSTMMPTAGGGYSFARAAFGPFGGYLTGTAILIEY AIAPAAIAVFIGGYCESLFGINGWMIYLACYAIFMGIHLKGAGEALKIMFAITLVAAVAL VVFIGAMIPHFNAQNLFDIPVSTGVGASLFLPHGYLGIWAAVPFAIWFFLAVEGVPLAAE EAKDPAKSLPRGLIGAMLILTAFAMLILFLGAGAAGASTLQNSGAPLVDALVKVYGTNTW LATFVNFVGLAGLIASFFSIIYAYSRQIFALSRAGYLPTSLSLTNKNKAPYLAIIIPGII GFLLSLTKEGDSLILIAVFGATISYVLILLSHIKLRLSKPDMPRPYKTPGGIITSSIALV LAVAAVVAGFVVNPKVWFIAAGIYVVFIAYFLFYSRYHLVKGTPEEEFANIKAAEQEL >gi|333032500|gb|GL891926.1| GENE 62 69785 - 71170 1363 461 aa, chain + ## HITS:1 COG:PA4024 KEGG:ns NR:ns ## COG: PA4024 COG4303 # Protein_GI_number: 15599219 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, large subunit # Organism: Pseudomonas aeruginosa # 3 459 4 460 464 673 70.0 0 MSYRNIVANQQYHFADLKTLMAKATPLRSGDELAGVAARDATEHVAAQMTLADVPLKTFL NEVVVDYDTDEITRLIIDEHDLAAFAPISHFTVGDFRNWLLGEDATPESLKALASGLTPE MVAAVSKIMRNQDLIYVASKCEVVTQFRNTIGLKGHLSTRLQPNHPTDDVLGISASILDG LMYGNGDAVIGINPATDNLHNLSELLKLLDHVIQEYQIPTQSCVLTHISSGIQLAEKNVP IDLMFQSIAGTQLANEGFGISLDLLQEGYEATLALKRGTIGQNVMYFETGQGSALSSNAH HGVDQQTLETRAYAVARKYNPLLVNTVVGFIGPEYLFNGKQIIRAGLEDHFCGKLLGVPM GCDICYTNHADADQNDMDVLLTLFGAAGINFIMGIPGSDDVMLNYQTTSFHDALYLRQLL GLKPAPEFSAWLEQQGIFKQQNSQICWADHMPDQFSRLLMN >gi|333032500|gb|GL891926.1| GENE 63 71181 - 71996 864 271 aa, chain + ## HITS:1 COG:PA4025 KEGG:ns NR:ns ## COG: PA4025 COG4302 # Protein_GI_number: 15599220 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine ammonia-lyase, small subunit # Organism: Pseudomonas aeruginosa # 6 262 3 259 273 238 47.0 1e-62 MKLNRDIQYPSSTHQDQWEKLKQFTDARIALGRAGCSIPTRALLEFQLSHAQAKDAVYQE MDVSYLSEQLAQQQLQSFHIQSNAPNKEIYLKRPDLGRQLSNPSKDTLIKKYAENPQQYD VCIVVGDGLSARAIEANAIAFIAALSEHIQQENWSLAPIVLATGSRVALGDEVAEIFKAS MLVMLIGERPGLSSPDSMGIYYTWNAYSGCLDSKRNCISNVRSAGLSIPVAVQRLMALMR KSKQLGFSGVNLKDEHQLSNIDHNENAKLLF >gi|333032500|gb|GL891926.1| GENE 64 72160 - 72882 800 240 aa, chain + ## HITS:1 COG:RSc1158 KEGG:ns NR:ns ## COG: RSc1158 COG0518 # Protein_GI_number: 17545877 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Ralstonia solanacearum # 9 235 2 232 242 169 43.0 5e-42 MNTTNAFPKTIYAIQHLAFEDLGSLEDVFYQLGFRVRYFEAGVDDLTPAFTHDGLTIILG GPIGVYETEDYPFLKDEIALLKQRLAADKPTLGICLGAQLIAHALGAKVYAGHQKEIGWG ALSLSLRPNQVLSPLLNNVHVLHWHGDTFDLPENAVLLASSEIYTNQAFEVGNNILALQF HIETTEENFEKWLIGHTCELRNAKISIPKLRVENLQYAQALEHAAFEVIQKFLKRIGYSG >gi|333032500|gb|GL891926.1| GENE 65 73308 - 75035 1979 575 aa, chain - ## HITS:1 COG:PA1794 KEGG:ns NR:ns ## COG: PA1794 COG0008 # Protein_GI_number: 15596991 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Pseudomonas aeruginosa # 25 570 2 553 556 722 61.0 0 MKPNDVVSNLPNNPTPNTHASVDSAQQEQQAGLDFVRQVITDDLAAGRAKQIVTRFPPEP NGYLHIGHVKAICLNFGVAEEFNGLCNLRFDDTNPDAEEQEYVDGIANDVKWLGFSWNGE PRYASGYFDQLYAWAIQLIEQGDAYVDLQSPEEIKLNRGSFVEPGKNSPYRDASVEENLA RFEKMRNGELKEGEAVLRAKIDMASPNVHMRDPILYRVLHSEHHQTGDKWKIYPMYDYAH PLSDAIEGITHSLCTLEFQDHRPFYDWIVEKVKSKAVPHQYESSRLNVDYTITSKRKLRK LVEGGYVNGWDDPRMPTVVGMRRRGFTPEGLRDFCKRVGVSKTDGIVDVAMLEFCIRQSL ENTAARGMAVLNPLKVTLTNLSEDLDLTHARHPNVDMGERVIPLTKEIYIDRKDFEEVPP KGFKRLIPDGEVRLRHAYVIKCDEVIKDANGEVVELKCSIDPDTLGKNPEGRKVKGVIHW VSATKGIPAEVRIYDRLFTEADPETGDDFLANLNPDSLKVVQAVIEPALAQAKPEDRFQF EREGYFVADQYDHTPEKPVFNRVLDLKDSFKPEKK >gi|333032500|gb|GL891926.1| GENE 66 75204 - 75713 654 169 aa, chain + ## HITS:1 COG:RSc1164 KEGG:ns NR:ns ## COG: RSc1164 COG0652 # Protein_GI_number: 17545883 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Ralstonia solanacearum # 1 167 10 178 179 224 65.0 7e-59 MSFPQVELNTNKGRIVLELNTEKAPKTAANFLEYVRDGFYDGVIFHRVIDGFMIQGGGFD ENFKEKATRDAIENEADNGLSNDVGTIAMARTQAPHSASAQFFINVKNNSFLNHTSKTAQ GWGYAVFGKVVEGMDVVEAIKGVRTGNRGYHADVPLENVVIESAKIISE >gi|333032500|gb|GL891926.1| GENE 67 75729 - 76448 739 239 aa, chain + ## HITS:1 COG:PA1792 KEGG:ns NR:ns ## COG: PA1792 COG2908 # Protein_GI_number: 15596989 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 230 1 235 240 179 41.0 5e-45 MTYLFISDLHLSPEHPRLVRGFLDLLVHYQNKQTQLYILGDWFNAWIGDDYSAPWLDEIV EALKVFNQKGNRVYFQVGNRDFALNQVFLDKFNGVLLPDIYYLNIAGHQYRLEHGDALCT DDISYQKFKKIIRNPFLVAFLRRTPLSFRTKLVNGFRKRSHSDKQQKSYEIMDVNEQAVL SALTDVDILIHGHTHRPAIHQLQHKQRIVLGDWREDQAYILEIDPSSNTQQLELIVWNY >gi|333032500|gb|GL891926.1| GENE 68 76456 - 76686 71 76 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02307 NR:ns ## KEGG: ACICU_02307 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 1 76 76 123 100.0 2e-27 MFELIPINRKSKLREIRIIKAFLISAFVLCLLILYIEYQKYAHINWKFVFISCLCMIWDF DLNRKIKELKVQIKSD >gi|333032500|gb|GL891926.1| GENE 69 76826 - 77479 666 217 aa, chain + ## HITS:1 COG:VCA0637 KEGG:ns NR:ns ## COG: VCA0637 COG0778 # Protein_GI_number: 15601395 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Vibrio cholerae # 1 217 1 217 217 217 47.0 2e-56 MDLLNTVKSRYTTKAYDPEKKIPQEKFNKLLEILRFTPSSVNIQPWHFLVADNPTAKERI AKALTGRYAYNAPKVLESSHTLVFCTRTDISPEYLNQLLEQDDLSGRFKDEKAKLGQKDT RHGYVEFYRNEQKNLFGWMENQTFIALGQLLFAAGLEGIDATPMGGFDEDVLNEEFGLKE KGLRSSVIVSLGYRSENDFNAKLPKSRLPDEVIFTHL >gi|333032500|gb|GL891926.1| GENE 70 77518 - 78291 596 257 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02309 NR:ns ## KEGG: ACICU_02309 # Name: not_defined # Def: putative integral membrane protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 257 1 257 257 414 100.0 1e-114 MQMIAWNYASASLLCYLWFKPDIQHISIQHTPWWLIAALGVILPSIFLCLAKSLEYAGIV KTEIAQRLSVVLSLLAAYFFFQEQFNSLKLLGIGLGIFAVLLILLGHFNESSGSQSKKAI FALMSVWFGYAAVDILLKYTSSLGLQFTLTLNLIFITAFVLSIIYLIFQKNSAWHFKNTF AGLMLGVLNFSNIALYVKAHILLKDSPAIVFASMNILVVLLGIVCGVVLYKEKLKLPTIL GTILGISGLVCLALAMK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:27:11 2011 Seq name: gi|333032499|gb|GL891927.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld355, whole genome shotgun sequence Length of sequence - 18960 bp Number of predicted genes - 15, with homology - 14 Number of transcription units - 9, operones - 2 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 62 - 121 2.6 1 1 Tu 1 . + CDS 342 - 455 65 ## + Prom 486 - 545 11.8 2 2 Tu 1 . + CDS 571 - 873 147 ## ACICU_01275 hypothetical protein + Term 921 - 968 2.2 - Term 909 - 956 3.3 3 3 Tu 1 . - CDS 1070 - 1420 161 ## ACICU_01274 hypothetical protein - Prom 1475 - 1534 3.5 4 4 Tu 1 . - CDS 1554 - 2462 1162 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 2497 - 2556 3.4 5 5 Tu 1 . - CDS 2572 - 3792 905 ## COG0038 Chloride channel protein EriC - Prom 3882 - 3941 5.0 - Term 4029 - 4080 3.2 6 6 Op 1 . - CDS 4094 - 5812 1935 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 7 6 Op 2 . - CDS 5812 - 7395 1600 ## COG1984 Allophanate hydrolase subunit 2 8 6 Op 3 1/0.000 - CDS 7428 - 8234 956 ## COG4336 Uncharacterized conserved protein 9 6 Op 4 7/0.000 - CDS 8246 - 9010 935 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 10 6 Op 5 . - CDS 9045 - 10277 1346 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family - Prom 10481 - 10540 6.5 - Term 10553 - 10595 -0.3 11 7 Tu 1 . - CDS 10643 - 11554 813 ## COG0583 Transcriptional regulator - Prom 11583 - 11642 7.1 - Term 11747 - 11788 9.3 12 8 Tu 1 . - CDS 11838 - 12155 482 ## ACICU_01264 hypothetical protein - Prom 12183 - 12242 7.6 - Term 12519 - 12559 2.7 13 9 Op 1 . - CDS 12587 - 13117 546 ## ACICU_01263 hypothetical protein 14 9 Op 2 . - CDS 13134 - 18041 4733 ## COG3209 Rhs family protein 15 9 Op 3 . - CDS 18051 - 18959 774 ## COG4253 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|333032499|gb|GL891927.1| GENE 1 342 - 455 65 37 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRWLSDLSKSTGNVGQQAKDSIRFSCRQAWEMTIVLK >gi|333032499|gb|GL891927.1| GENE 2 571 - 873 147 100 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01275 NR:ns ## KEGG: ACICU_01275 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 100 1 100 100 132 100.0 6e-30 MPFVLPLIWYIPYYLFFNLVFLIPMSLLIFIFQLILVFFFGDNKVTTNICMTLAFLVLMV EFWLIYRASYIKTFEQRNFFQAAKDSLIELRLGLKMILKK >gi|333032499|gb|GL891927.1| GENE 3 1070 - 1420 161 116 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01274 NR:ns ## KEGG: ACICU_01274 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 116 1 116 116 218 100.0 5e-56 MEKQFADEKMKKYLRLMRLRRNFVLSVFLVPSVVIVVLMLARVDEKYLSIYFPIVMIPII LFLMFKLLANGICPWCKCGFFMNDLGSFVNGLSFIFRKQCSHCGKPEKLSKNEDDS >gi|333032499|gb|GL891927.1| GENE 4 1554 - 2462 1162 302 aa, chain - ## HITS:1 COG:ECU11g0430 KEGG:ns NR:ns ## COG: ECU11g0430 COG0790 # Protein_GI_number: 19074843 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Encephalitozoon_cuniculi # 37 298 236 497 590 172 37.0 7e-43 MFFILRKKLQKIGIILVAINLLACGHQPDFKDITHLAESGDAGAQAKLGELYVEGQVVPQ DYKKAFEWYSKAANQGNAEAQNNLGAMYALGQGVEQNYKKAFEWYSKAAEQGEVKAQNNL GAYYANGDGGVKNYQKAFEWFSKAAAQDNAEAKYYLGILYEEGYGVTQDYKKAFEWYSKA AAQNYTDAQNNLAALYAQGKGVELNNKKAFELYSKAAEQGNEKAQNNLGAIYALGIGVNQ DYKKAFEWYSKAAQQENDEAQFTVGMMYYKGEGVQQNNELAEKWLRKAAENGNKDALSLF EE >gi|333032499|gb|GL891927.1| GENE 5 2572 - 3792 905 406 aa, chain - ## HITS:1 COG:RSc1803 KEGG:ns NR:ns ## COG: RSc1803 COG0038 # Protein_GI_number: 17546522 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Ralstonia solanacearum # 12 404 1 391 431 299 44.0 8e-81 MKILPSSEYDQILKYSVYWLVISIVIGVVAGLASTLIFVAFDISNKVRSLHHWLIYFLPF VGFGIGYLIKKYGSPIERGTHLLIDEIHQPKSFIPKRMSPIIFITSILTQLFGGSAGREA PAVQLSGALIDHLSHILKISEDNRKICLIASIGAGFAGVFGLPLAGAIYGLEITALGNLR YSAIFPCFVSALIASAIPELFEIVHPHVFYVISEFPAIHFGTLMSLIAAGLIFGLVARFF IAAIHFASDVFYKYVRYLPLRTMAGGIVIMLLTLFTAHQQYNGLGTDKIISSFYVPIEFY DFFNKTIFTAITLGSGFKGGEITPLFYVGATLGNALGAVLNLPISLLAGLGLVSLFSGAS KAPLTSIILAVELFGMNVATYAIITCLLAALFSGNCGLYRRKKLMD >gi|333032499|gb|GL891927.1| GENE 6 4094 - 5812 1935 572 aa, chain - ## HITS:1 COG:AGl1864 KEGG:ns NR:ns ## COG: AGl1864 COG4770 # Protein_GI_number: 15891049 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 571 2 574 576 635 58.0 0 MNTEKLLIANRGEIAVRIIHACRDMGIASVALYADDDINSMHVELADEAWGLAGATASET YLNIPAIIEVAKKSKATMVHPGYGFLSERAEFAQAVIDAGLKWVGPSPSAIEKLGDKIEA RKIAASVGAPLVQGTQDPLNNAEEALEFAKQYGLPIAIKAAFGGGGRGLKVAWKLEEVKE LYESAVREAKAAFGRGECFVEQYLDKPRHVEAQVIADQHGNIVVLGTRDCSLQRRNQKLV EEAPAPFISDEIYQQILSSAKNICQAANYVGAGTVEYLLSRDGKLSFLEVNTRLQVEHPV TEETSKVDLVVEQIRVAQGEVLSIKETPKAQGHAIEFRINAEDPARGFIPAFGVLSLFEA PFGHGVRVDTGVRTGSLVSSHFDSLMAKLIVSGPTREVAIARAKRALKQFKIEGVASVLD FHRAVLNEPGFTDEFNVHTRWIENDFKQELKPTKRGIPNHQQPMLLSYIEIDGKLHRLGL PAGMFAQGPATAVQAQIAEPEVSAEHLLAPINGVISAWKVENGEQVTEGQVVAIMEAMKM EVQVLAHRSGVIQIGAEKGTTCHAETVIASIH >gi|333032499|gb|GL891927.1| GENE 7 5812 - 7395 1600 527 aa, chain - ## HITS:1 COG:AGl1866_2 KEGG:ns NR:ns ## COG: AGl1866_2 COG1984 # Protein_GI_number: 15891050 # Func_class: E Amino acid transport and metabolism # Function: Allophanate hydrolase subunit 2 # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 231 523 2 295 308 264 47.0 4e-70 MRFLSVNADCFLIELASLEETLALYNKLQNTQLNGIKDLVPAAKTILVFFNEIETNFKTL VASIQSLKIDSGFERSGQEVIVPICYNGEDLAQVAELQGLTVADVIRKHHQSVWNVAFIG FAPGFAYMSSPDKPFTDIPRLTVPRKKIPSGSLGLAGKYSGIYPKDSPGGWQLIGTTTEK MWDLERKNPALLLPGMTVHFEDVTHRPTTVTVPQQITRKAEPKQSVPLFTITAPSLQMLI QDEGRLNQTNIGVGVAGAMDLSAMHSANRIVGNPTDTPVIEVLNGGLKAKMQHAGVIAVA GAISNIRVKFADGQTADFASYQPIDLDEGDEFQIQPPTAGLRNYLAVRGGIDVEPVLNSA SFDSLAVLGPEPLKLGDSIYQGQVKAANISVNEVGKSDLPKAGEVVELDIVMGPRTDWFE QDSIELLCQQEWLVTNESNRVGLRLSGEQPLTRKITHELESEGTCIGALQIPPSGQPVLF MNDHPLTGGYPVIASVAKHHWDLVAQIPAGCRIKFKKIAEFTDFENE >gi|333032499|gb|GL891927.1| GENE 8 7428 - 8234 956 268 aa, chain - ## HITS:1 COG:AGl1868 KEGG:ns NR:ns ## COG: AGl1868 COG4336 # Protein_GI_number: 15891051 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 266 14 267 269 337 62.0 1e-92 MYKDIKVDPAQLEAALDARLKIRAGFDKPTAGMAAGMTQVNMISVPKEWAYDFLLYAHRN PQSCPVLDVLEEGIYATKLAADSDIRTDFPRYRIWKDGEMVDEVTDAREIYNAHPDLVTF LIGCSFSFETALQEAGIEVRHIHDDTNVPMYLSNIECEPAGRISGNMVVSMRPIPSHQIS EAVKITARMPSVHGAPVHIGHPESLGISDVNKPDFGDASRIEAGEIPVFWACGVTPQAAV MNSKIPFAISHAPGYMFITDIPDRAWMG >gi|333032499|gb|GL891927.1| GENE 9 8246 - 9010 935 254 aa, chain - ## HITS:1 COG:AGl1871 KEGG:ns NR:ns ## COG: AGl1871 COG1540 # Protein_GI_number: 15891052 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 252 4 253 255 281 57.0 8e-76 MFVDLNSDLGESFGSWKMGNDDQILPVVTSANIACGFHAGDPLGILKTVRKAVELGVTIG AHVSYPDLVGFGRRNMDLSRDELIADVLYQISALDGLAKVAGSKVQYVKPHGALYNTIAH DQAQAAAVIDAIKMYNPELVLVALAGSNLVEQARAAGLKVVSEAFADRAYNSDGSLVSRR LEGAVLHDSAFVASRVVSMLKNGGVESIDGVFTPIQADTICLHGDTDGALEMSAAIKAEL VKNNIEIRPFVNKA >gi|333032499|gb|GL891927.1| GENE 10 9045 - 10277 1346 410 aa, chain - ## HITS:1 COG:AGl1874 KEGG:ns NR:ns ## COG: AGl1874 COG1914 # Protein_GI_number: 15891053 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 407 22 417 419 423 61.0 1e-118 MSLLKSSFLSDRQWAIVASIFMMATSAMGPGFLTQTAVFTVKLGAAFGFAILISILIDYV VQQNIWRVVTLTQMRASDIANKALPGSGYLLAFLVILGGFFFSVGNIAGAALGLNALFGL DTKWGGILSGALAILIFASKKATLAMDKSMIVLGLLKILLIIIVAVIVMPPVGQAVQQTF APDQIDFAIITTIVGGTVGGYICYAGAHRLLDKGAVGPENINEVAKAATKGIVVVGIMRY VLFLAFLGVVVSGATIDLASHDANPAAQAFQYAAGTFGFKLFGLIFWAAGISSTIGAAYT SVSFFTAFKKNLTPKQTNYTTITFIALALLLYVLLGATPAGLLIFVGGFNGLVLPIGLTI FVYVAACRKDLMGNYNYPKWLLILGGLTCLLTWWMGYMSFTTVFNYLTKL >gi|333032499|gb|GL891927.1| GENE 11 10643 - 11554 813 303 aa, chain - ## HITS:1 COG:PA2115 KEGG:ns NR:ns ## COG: PA2115 COG0583 # Protein_GI_number: 15597311 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 250 1 250 317 125 30.0 1e-28 MNLKNLEAFYWVVTLNSFNKAATKLQTTQPAVSQKITSLENELGFKVLDRSLRQFKLTHK GMTLFKYAEKFMRLETDLVAELTENQHLTGTIRLGVSETIVYTWLVEYIEKVQQEFPKVS VEIVVDLTPNLQEGVRTGDLDMAFLLGPTLAFECIEQSLCNFELSFLAAPSFKGGIGQMS FKTLMSHTILTYPKITYPYKELKAKMKEKGIDEPLSITSYSLATLLRLAEQGLGIAVVPT LTALKEITDGRLEILNTPIRLKTFHFTSIYIHGNDVALKEKLTEVAVQVSESAMKRLNEQ IKK >gi|333032499|gb|GL891927.1| GENE 12 11838 - 12155 482 105 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01264 NR:ns ## KEGG: ACICU_01264 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 105 1 105 105 182 100.0 4e-45 MNKMHVTLAVVVGLIIGGVVGAIGYSKTAARYDAMTTACVMVNQAVEHGILKPEQVKELG ELTGQTLKKDYASVASKFKFSEKQLGNASEGSNCSQFIVGVNAAQ >gi|333032499|gb|GL891927.1| GENE 13 12587 - 13117 546 176 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01263 NR:ns ## KEGG: ACICU_01263 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 176 1 176 176 303 100.0 1e-81 MNFNDLLKKIDECNEIIYGERFLINQDNSVNDDLFKSYLSCIPENDFNIDLGGNINDFLG KDSLENIQYMFEDIFDGESTTVFLTQHDVNVVYINHNSGEIGACISGDELHIIAKNLFDF FSQINVIQNLIIDLYDSNPRGENGGYKTGFLEELKKTLIKENVVLDVDYFLEFFYG >gi|333032499|gb|GL891927.1| GENE 14 13134 - 18041 4733 1635 aa, chain - ## HITS:1 COG:STM0291 KEGG:ns NR:ns ## COG: STM0291 COG3209 # Protein_GI_number: 16763674 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Rhs family protein # Organism: Salmonella typhimurium LT2 # 548 1480 405 1251 1364 322 27.0 3e-87 MSGKTEVVKPLTEVAIKDVSHSKQKIDSWLQSHTHQIVTLDLVASVMGTVPIIGNVMAAI DVVSDICYIYDKGFQNADIMDWTTMGIDLIGVAPIPGTTAIRTSARPALFLVRQEVKRVG KAALGEAVIVVISNHLNDQVAGDIEKFCKTGLNKLNSILATCGATVQNATTQINGGIVRV VTKGQIFTNAGSNASRAQQQAAGVIKGIKSGDLTRAGKNLVYMTENWGKALIKTGANSNA KVASSLVPAHLKQPILNVGATINKIGITANTKIKGLGNTAQPQTIGWLFDVLRMSASKFR KKKSAQVKPTQTTQVKHDKKNNKLEKSNDEHAATHNANACKNCKGGTTHSITFALGTEFL NHIDAQIHPLLIEQFSRTYVSNLYQYDQSIFGARWITPFTTKIVRCSSYNVHHPKEPIEQ DGWEYIGSDGRPVRLPELKVGQSYYDEVETFTYTVISPEIRAISYGVSETRFYQKYKNEF RLASIERQNGFSIGLRYDHELENSDSYLSDIIFKQQQQILAHVALQINDAQKVVAAWLVE EGQLIRQLSAYQYNEQDDLIKATNEFAASYEYQYQAHLLTRYTDLTHRGMNLKWDGVLPS SKAIEEWADDYSSATKLDWDENVRVTSVMDIDGNVTEYYYGITGYTYRIIYPDNLQEWFF RDQAKNITSHIATDGTETSYTYDERGNVLSMVQADGSTFYYEYDEKDNLIGFVDAEQGRW FKEYDASGNIIKEIDPLKRETVYAYNAMGLVTSITDAKGGKKTLKYDDRGNLISYTDCSG KETKWHYDDRGRVKFIENALKQKVEYFYTELTTELRQPIAKGLPLNAFGQLEKIKHADGA EEHFIHDAEGRLLVHIDPKGQQTRYEYDAAGLITKRTDPLNQTLKYQWDRLSRLKRLINE NGASYEFVYDAAGRLVKEIDFDGKETVYAYDEYNGRLTTSIEVASTYGQDFKDRAAPKDR IQQFIFDSMGRLEQRTAGYGYQGQELEEKQTEEFSYDGLGNLVQAKNAETNLQWFYDAAG NLIKEHHQDVVTQKTAVWKHVYDELNNRTTTIRPDGQKIDWLSYGSGHVYGMALNGEDVV SFERDDLHRETLRHYANGLSQQQSYDEVGRLTQQLMLSGHDKGYQAQTQNNAIQHTNQLI ERLYHYDKTGELTLIKDTRRGAIHYKYDPVGRLLEATSKLGKETFNFDPASNILERYNST KEQSSQHISDEKGYGYNRLVNNIVQEYLDQQYQYDAFGQLIRQKSSQGDLNLEWDVFGRL VRSRNNQYTAEYRYDALGRRIQKRSKHHHTGQEQNISYGWDGDTLAYESSADLTKHYFYE KDSFVPLLQAAYHHPIELHQTQDWSDKTYSIYKDPLWNTVKQSQGFDDVWFYHCDHLGTP QEMSDQTGAIIWKAEYKAWGECKLEQTNSDFFEKSEIISNNIRFQGQYFDEETGLHYNRY RYYSPYVGRFISKDPIGLLGGFNVYAYTANPVQWVDPYGLAPCSLVRYKPDKVTPQAGSR QDAIDRAWSLEKQLIQTTGTGTRDWSKAELDTILRTPSGSGKGHLSSVMSNLGYTGHHIN SVKNNGALGESWKGDPRNIVFLENPKHPNSSPMPNAYNEHFHSKQGHRGSTTNVSRGRLI DRQAMINQFNKGCSI >gi|333032499|gb|GL891927.1| GENE 15 18051 - 18959 774 302 aa, chain - ## HITS:1 COG:YPO0970_2 KEGG:ns NR:ns ## COG: YPO0970_2 COG4253 # Protein_GI_number: 16121275 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 2 84 107 189 211 60 40.0 3e-09 SGLKAVAAQGKVEIQAQSDALDVLANKGITISSTEDCIEISSPKEIVITGASSQITLNGS GIFPKTGGKFQVNAGQHVFQGGASASVQSSLPPPPKRVQGVLELFHEYAHGEFVKGGSYR VVDNFGKEVTGKLDDKGFAKVSGLATGAVKVFFESDHRDPWDTASDFKRPVEWPNKNDAD SEQSDSLIAQMSKTAQSKLGELSKQLTNPTNIMKNIQTAQSIKSEGAKALMPMLKTQAQG LVTDQVKSFLPISEAGQKIGNNIELTSIQKMNDFNKSGSIDGNSLVNNTLHQYLQSPFKK NS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:27:36 2011 Seq name: gi|333032498|gb|GL891928.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld358, whole genome shotgun sequence Length of sequence - 32171 bp Number of predicted genes - 36, with homology - 34 Number of transcription units - 25, operones - 8 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 123 - 182 8.4 1 1 Tu 1 . + CDS 255 - 374 110 ## + Term 389 - 441 1.4 - Term 464 - 512 9.4 2 2 Tu 1 . - CDS 531 - 1346 759 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 1521 - 1580 11.4 + Prom 1324 - 1383 4.5 3 3 Tu 1 . + CDS 1445 - 1534 58 ## + Term 1646 - 1698 4.3 4 4 Tu 1 . - CDS 1626 - 1850 131 ## ACICU_01211 hypothetical protein - Prom 1924 - 1983 7.1 - Term 1900 - 1938 -0.0 5 5 Tu 1 . - CDS 2054 - 2269 357 ## COG1278 Cold shock proteins - Prom 2332 - 2391 4.9 + Prom 2590 - 2649 8.7 6 6 Tu 1 . + CDS 2789 - 3406 445 ## COG1280 Putative threonine efflux protein + Term 3424 - 3482 14.5 7 7 Op 1 . - CDS 3473 - 4018 501 ## COG3926 Putative secretion activating protein 8 7 Op 2 . - CDS 4056 - 4445 426 ## ACICU_01207 hypothetical protein - Prom 4477 - 4536 5.6 9 8 Tu 1 . - CDS 4613 - 4810 127 ## ABSDF2330 hypothetical protein - Prom 4943 - 5002 9.4 + Prom 4836 - 4895 8.1 10 9 Tu 1 . + CDS 5046 - 5717 702 ## COG2932 Predicted transcriptional regulator + Term 5810 - 5863 7.1 - Term 5805 - 5841 4.2 11 10 Tu 1 . - CDS 5869 - 6102 190 ## ABBFA_002351 hypothetical protein - TRNA 6276 - 6352 82.1 # Met CAT 0 0 + Prom 6394 - 6453 6.9 12 11 Op 1 . + CDS 6608 - 7870 1141 ## COG1570 Exonuclease VII, large subunit 13 11 Op 2 . + CDS 7863 - 8057 205 ## ABAYE2543 exodeoxyribonuclease VII small subunit (exonuclease VII small subunit) (EC:3.1.11.6) - Term 8121 - 8160 2.9 14 12 Op 1 . - CDS 8282 - 8506 374 ## ABBFA_002355 hypothetical protein 15 12 Op 2 . - CDS 8557 - 9150 545 ## COG1280 Putative threonine efflux protein - Prom 9332 - 9391 9.1 + Prom 9513 - 9572 1.5 16 13 Tu 1 . + CDS 9595 - 9921 340 ## AB57_1357 hypothetical protein + Term 9950 - 9987 1.0 + Prom 10169 - 10228 8.1 17 14 Tu 1 . + CDS 10401 - 10757 336 ## COG1145 Ferredoxin + Term 10771 - 10820 7.5 - Term 11094 - 11129 2.5 18 15 Op 1 . - CDS 11350 - 11757 360 ## COG3791 Uncharacterized conserved protein 19 15 Op 2 3/0.200 - CDS 11785 - 12186 439 ## COG0789 Predicted transcriptional regulators - Term 12195 - 12243 10.1 20 15 Op 3 . - CDS 12262 - 14733 2662 ## COG2217 Cation transport ATPase - Prom 14890 - 14949 5.4 + Prom 14791 - 14850 6.3 21 16 Tu 1 . + CDS 14906 - 15100 370 ## ABAYE2552 copper chaperone + Term 15248 - 15281 -0.5 - Term 15099 - 15139 5.4 22 17 Tu 1 . - CDS 15150 - 16109 600 ## COG0583 Transcriptional regulator - Prom 16155 - 16214 6.3 + Prom 16288 - 16347 1.8 23 18 Op 1 6/0.000 + CDS 16392 - 17774 1644 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 24 18 Op 2 2/0.200 + CDS 17771 - 18271 531 ## COG5517 Small subunit of phenylpropionate dioxygenase + Term 18276 - 18325 1.2 25 19 Op 1 2/0.200 + CDS 18342 - 19358 1095 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 26 19 Op 2 . + CDS 19380 - 20165 1056 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 27 19 Op 3 1/0.200 + CDS 20223 - 21416 1305 ## COG3135 Uncharacterized protein involved in benzoate metabolism + Term 21458 - 21510 6.5 + Prom 21798 - 21857 2.2 28 20 Op 1 . + CDS 21882 - 23240 1300 ## COG0477 Permeases of the major facilitator superfamily + Term 23248 - 23278 1.0 29 20 Op 2 . + CDS 23285 - 23692 231 ## ACICU_01186 putative benzoate transport BenP 30 20 Op 3 . + CDS 23740 - 24576 688 ## ACICU_01186 putative benzoate transport BenP + Term 24593 - 24633 7.0 - Term 24630 - 24656 -1.0 31 21 Tu 1 . - CDS 24677 - 25783 1503 ## COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III - Prom 25811 - 25870 1.9 32 22 Tu 1 . - CDS 25878 - 29735 3978 ## COG1643 HrpA-like helicases + Prom 29783 - 29842 9.7 33 23 Tu 1 . + CDS 30088 - 30651 570 ## COG0450 Peroxiredoxin + Term 30673 - 30718 6.8 + Prom 30697 - 30756 6.8 34 24 Tu 1 . + CDS 30844 - 31059 234 ## ABBFA_002374 hypothetical protein - Term 31059 - 31091 4.0 35 25 Op 1 . - CDS 31124 - 31711 719 ## COG4122 Predicted O-methyltransferase 36 25 Op 2 . - CDS 31748 - 31966 208 ## COG4728 Uncharacterized protein conserved in bacteria - Prom 32088 - 32147 3.4 Predicted protein(s) >gi|333032498|gb|GL891928.1| GENE 1 255 - 374 110 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSFLRKKNKASFVLFIITLYSMLGFGLGFIIWEYFLQIP >gi|333032498|gb|GL891928.1| GENE 2 531 - 1346 759 271 aa, chain - ## HITS:1 COG:PA0393 KEGG:ns NR:ns ## COG: PA0393 COG0345 # Protein_GI_number: 15595590 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Pseudomonas aeruginosa # 7 264 4 271 273 139 33.0 5e-33 MLNIVQPNICFIGSSNLSLALIGGLVLKGFQREKINLIEEVKFENQIILKQKQHEVKKAD IVVLLLDPKDLKAILAPLKKWLADKTIVSMMAGVNIKQLMSITGSKKIIRVISNPPVLTY TGTHVLIGSDYLEPLDKEVIETIYSATGRTYWANSESQSDAIIALSGSGPAYFFYILDSM VKTGVSMGLDKQFALDLILQAASGAVEMVRKSNVQPSELCGKVTLANGITESALRMFELG NLSDDIRLALKAAYHRSKEISLEINAEITRH >gi|333032498|gb|GL891928.1| GENE 3 1445 - 1534 58 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNVKFNFTTILNSELRLLFTYDFMNNKLI >gi|333032498|gb|GL891928.1| GENE 4 1626 - 1850 131 74 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01211 NR:ns ## KEGG: ACICU_01211 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 74 1 74 74 145 100.0 3e-34 MDICIGGILNGKVRKNNENYFSIGNPHSDDVTEYHKQYFHLDGKLLSFWVCNEINFQEAS RIAESFFKKEQSCY >gi|333032498|gb|GL891928.1| GENE 5 2054 - 2269 357 71 aa, chain - ## HITS:1 COG:FN0528 KEGG:ns NR:ns ## COG: FN0528 COG1278 # Protein_GI_number: 19703863 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Fusobacterium nucleatum # 6 68 8 70 71 84 68.0 7e-17 MSNTTGTVKWFNETKGFGFIQTDEGKDVFAHFSEIQTQGFKVLLEGQRVQFTVTQGKKGP QASNITIVTNA >gi|333032498|gb|GL891928.1| GENE 6 2789 - 3406 445 205 aa, chain + ## HITS:1 COG:VC0136 KEGG:ns NR:ns ## COG: VC0136 COG1280 # Protein_GI_number: 15640167 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 5 204 7 202 205 103 30.0 2e-22 MSGLLVFITIAFLTLSSPGPGVLFTVTNSINYGVRTALFGISGLIIGMFIIAVISASGVG LIITSNPTIFTALKFIGAFYLMYLGYKNFIKKSPTQDLLETEHNEKDIRKSKLFYQGLFA SLLNPKTIVFFIALFPQFIDIKKEILNQFLILSLTFCLIGFLIHLVYANFSSIFKEKMLA GNNFSKLNKVSGCIFFLLAVLLITQ >gi|333032498|gb|GL891928.1| GENE 7 3473 - 4018 501 181 aa, chain - ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 7 180 5 177 177 155 45.0 5e-38 MNIEQYLDALIKREGGYVNDPLDHGHATKFGITQAVARSYGYQGTMENLTLETAREIYRN QYWLEPRFDQVNLISALVAEELFDTGVNCGISFTKPLLQRALNLLNRQGKEDWVDLKVDG EYGPATLQALIKYIKNRGKEGEKVLVRLLNIMQGQRYIEITETNPKHEQFFYVWLANRIS L >gi|333032498|gb|GL891928.1| GENE 8 4056 - 4445 426 129 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01207 NR:ns ## KEGG: ACICU_01207 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 129 1 129 129 217 100.0 1e-55 MENFLTSNGLAAAFNLYGTVMMVVLAVSLVVAVVLIMRFPRSPQEWVVGLICTVVSSLTG GSFIIMKWNLHEWVTDIWGMITLGGFFFICGLPGWAIVRWIFNFINKQEGKTIVEVMKDL KKAKDDIQS >gi|333032498|gb|GL891928.1| GENE 9 4613 - 4810 127 65 aa, chain - ## HITS:1 COG:no KEGG:ABSDF2330 NR:ns ## KEGG: ABSDF2330 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 65 1 65 65 113 100.0 2e-24 MSGLYRLLKTRNGIKKARFRGSGLMFVDKGYQEHEESNKEFNASQKFPIYGNLLSQLFGQ KREVI >gi|333032498|gb|GL891928.1| GENE 10 5046 - 5717 702 223 aa, chain + ## HITS:1 COG:NMB0910 KEGG:ns NR:ns ## COG: NMB0910 COG2932 # Protein_GI_number: 15676805 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Neisseria meningitidis MC58 # 19 220 23 233 238 74 29.0 2e-13 MALKDRLKDSRIKAKRTQAEVAEAVKMSQPAYQALESGKNLKSAFLPLIAQFLGVDAYWL TTGNSEDSFRESDVFNPTVVSNDAADQYVWIEVVEASFSCGTGESIEFHFDAINGKIPFP ASFFKEKRVAQECMRIIKAKGDSMTDYIKDGDLVGIDISQTEVIDGEIYAVYFAGEGMIK QIFKEADGSLILHSLNEKFRDRRVTEENGKNFKVMGRQFWRAG >gi|333032498|gb|GL891928.1| GENE 11 5869 - 6102 190 77 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002351 NR:ns ## KEGG: ABBFA_002351 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 77 1 77 77 144 100.0 1e-33 MIVNIVNEWQIATAVNGNEINVRIVPHVRKQNSLDGYRWVEVGKKIQLQTGEEIELNQDG KSFYAGFNQLYRLNTYC >gi|333032498|gb|GL891928.1| GENE 12 6608 - 7870 1141 420 aa, chain + ## HITS:1 COG:DR0186 KEGG:ns NR:ns ## COG: DR0186 COG1570 # Protein_GI_number: 15805222 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Deinococcus radiodurans # 6 409 28 411 416 198 34.0 1e-50 MSDPQLSLSEYLGTVQEVIRLTFDEPVWVRAEIRNLNVKGGHYYLELAEKDADTDKVIAS CKATIWKFSASKIVLKFERETGIELASDLNVLIKIRARFDPQYGFSVNIEEIDSSFTLGE IAKRYQQIVERLTQEGLIHKNKLLPTPFDIQNVLVIAPQNAAGLGDFKKDADALERNGVC HFVYQSATFQGNTAAVSLMESLATGLKQWANNFNFPPDLIVIIRGGGAVNDLAYLNDYEL AALLCKRSVPIWVGIGHEKDRTILDEIAHRSFDTPSKVIAGIRNHIVERVQEAVDNLQTI KLLSQHQITTYQSKSDQYLQHIKSSAQAQLNSAHQFLEQIKERIQFVSQQQVKFSLSQTE SLMREILLQNPKQIQAKGYAIVRSEGKAIRSIHQITSSTITVDMQDGAINANITEVIPNE >gi|333032498|gb|GL891928.1| GENE 13 7863 - 8057 205 64 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2543 NR:ns ## KEGG: ABAYE2543 # Name: not_defined # Def: exodeoxyribonuclease VII small subunit (exonuclease VII small subunit) (EC:3.1.11.6) # Organism: A.baumannii_AYE # Pathway: not_defined # 1 64 1 64 64 99 100.0 5e-20 MNDKELTFKEGHDILKRNAELLESQESPDIDNLMKIVEESIGAYKACKSRIEAVQQALDE TFKE >gi|333032498|gb|GL891928.1| GENE 14 8282 - 8506 374 74 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002355 NR:ns ## KEGG: ABBFA_002355 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 74 1 74 74 120 100.0 1e-26 MKRLKVVIKDQFDQESIALAKVRPANDQKLELYKSVEHIEIDDDIILPNMDLLYENPKDG KIYKLVGPFNEDEL >gi|333032498|gb|GL891928.1| GENE 15 8557 - 9150 545 197 aa, chain - ## HITS:1 COG:RSc2088 KEGG:ns NR:ns ## COG: RSc2088 COG1280 # Protein_GI_number: 17546807 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Ralstonia solanacearum # 10 194 14 198 200 108 38.0 6e-24 MVSFLFIGLVVTILLTPGPTNTLLASAGIQAGVKHSLKLIPAEVIGYLIAITSWGVLLES VSHFIPWLPAILKLMSAGFILYLAFKLWMTSSEDINLNRPLITPKALFLATLLNPKALLF ASAIFPHAAWEVPHLYFIHIVVFLSLITPIAFLWIMFGTVLISNKVTWLNQRNLQRIAAF ILTFFAMPIGYSAISSF >gi|333032498|gb|GL891928.1| GENE 16 9595 - 9921 340 108 aa, chain + ## HITS:1 COG:no KEGG:AB57_1357 NR:ns ## KEGG: AB57_1357 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 107 2 108 114 206 100.0 3e-52 MNAYVRPHPDGFKSYLGKDQKTGLYTVRVGWTVYETNANGSVLYIVKEESKIPLDVEKFK TDRPKIYDALLNEVQFQRRKQLAIDLQKSNIPSYDRKAYKKRRGFTGS >gi|333032498|gb|GL891928.1| GENE 17 10401 - 10757 336 118 aa, chain + ## HITS:1 COG:STM1261 KEGG:ns NR:ns ## COG: STM1261 COG1145 # Protein_GI_number: 16764613 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Salmonella typhimurium LT2 # 19 113 9 103 108 58 45.0 3e-09 MNSSQEPNQSLFNQASTSIQACIECMFACKHCASACLQEEHVHMMRECIKHCLTCVETCQ LCTSLELRHSELAEQAMQLCANACQLCAAECSKHEHEHCQVCAKACLACAQACQAYRA >gi|333032498|gb|GL891928.1| GENE 18 11350 - 11757 360 135 aa, chain - ## HITS:1 COG:PA2706 KEGG:ns NR:ns ## COG: PA2706 COG3791 # Protein_GI_number: 15597902 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 4 128 3 131 131 88 34.0 3e-18 MAYTASCLCNGVQLRINAELEPIMVCHCKQCQKAQGAAFAAITQVQKSDLEIVQGENLLQ AYFASPNKKRVFCKTCGSPVWSERLDKPDVVRLRVGLINEEISTPVISHAFVNSQVKWYP ICDTAHQYPNGVENP >gi|333032498|gb|GL891928.1| GENE 19 11785 - 12186 439 133 aa, chain - ## HITS:1 COG:SMb21579 KEGG:ns NR:ns ## COG: SMb21579 COG0789 # Protein_GI_number: 16264767 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 1 129 1 129 147 140 52.0 9e-34 MNIGQASKHSGISAKMIRYYEEIGLLEAAQRSASGYRIYSETDLKTLNFLKHARELGFSS EQMKELISLWKNTDRHSVEVKALTVKHIAELKQKIAHLQEMVNILQASADDCCGDQQASC AILDHIEKGVGVS >gi|333032498|gb|GL891928.1| GENE 20 12262 - 14733 2662 823 aa, chain - ## HITS:1 COG:STM0353 KEGG:ns NR:ns ## COG: STM0353 COG2217 # Protein_GI_number: 16763733 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Salmonella typhimurium LT2 # 81 822 11 753 762 984 69.0 0 MDSKTTKLPAYSETLSIEGMTCASCVGRVEKALKKVENIEIANVNLATEKAVVYSNQPIQ REALVKAVERAGYDVPKAAPVELSIEGMTCASCVARVEKALKKVDGVQEATVNLATEQAW VQTDSSVNVEDLIRAVKKAGYDAKASEKHQDEQLDKKASELDQLKKDLIISIVLALPVFI LEMGSHLIPAFHMWVMHTIGQYNSWLLQFVLTTLILVFPGRRFYQKGIPALWRLAPDMNS LVAVGTLAAYSFSVVATFMPQVLPQGTVNVYFEAAAVIVSLILLGRYFEAKAKGRTSQAI QHLVGMQPKTARIQRDGQVVEVAVAEMVSGTIVEIRPGERVPVDGEVVEGHSYIDESMIT GEPVPVEKRVGQQVVGGTVNQNGTLNIRATAVGSSSVLSQIIRMVEQAQGSKLPIQGLVD KVTMWFVPAVMLIAAITFLVWFIFGPEPALTFGLVNAVAVLIIACPCAMGLATPTSIMVG TGRGAELGVLFRKGEALQLLQEAQVVAVDKTGTLTEGKPTLTDFNVQSGFERNQVLTLVA SVEAKSEHPIALAIVQAAESEGLNLLPVTAFNSITGSGIEAEVSGQKVQIGADRYMHQLG LDTSSFQAIAAQLGEEGKTPLYVAIDQQLAAIIAVADPIKETTYAAIEALHQLGLKVAMI TGDNRHTAQAIAKKLNIDEVVAEVLPEGKVDTVRQLQKQYGRLAFVGDGINDAPALAQAD VGLAIGTGTDVAIEAADVVLMSGSLKGVPNAIALSKATMRNIRQNLFWAFVYNVALIPIA AGALYPAFGVLLSPMFAAGAMALSSVFVLGNALRLKRFHAPVQ >gi|333032498|gb|GL891928.1| GENE 21 14906 - 15100 370 64 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2552 NR:ns ## KEGG: ABAYE2552 # Name: not_defined # Def: copper chaperone # Organism: A.baumannii_AYE # Pathway: not_defined # 1 64 3 66 66 107 100.0 2e-22 MKLLIENMTCGGCARGVTATIQDVDPNAKVDVDLATKIVTVESSESVDKITEALEEDGFP AKVQ >gi|333032498|gb|GL891928.1| GENE 22 15150 - 16109 600 319 aa, chain - ## HITS:1 COG:PA2510 KEGG:ns NR:ns ## COG: PA2510 COG0583 # Protein_GI_number: 15597706 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 282 1 279 290 219 45.0 8e-57 MELRHLRYFVAVVEEQSFTKAAEKLFIAQPPLSRQIQNLESELGIQLFERGSRPLQTTPA GHFFYQHAVKLLSNAEEIKSMTKRIGLIERSMTIGFVGSLLYGLLPRIIYLFRQQQPHLN IQLMELSTTEQLQALKEGRIDVGFGRLRISDPAVRRILLRKERLVVAAHTSHPIAQRTEG VYLADLIDEKMFMYPTSPKPNFSTQLLNIFAEHSLVPKNMHEIREIQLALGLVAAGEGIC IIPASADTIRFPHLNYIPILDNGAVSPIFITARAMDRSEDLQSLFDCIYQVYDLEGIPYQ RTVFTLDQNPIDDSNGIDF >gi|333032498|gb|GL891928.1| GENE 23 16392 - 17774 1644 460 aa, chain + ## HITS:1 COG:PA2518 KEGG:ns NR:ns ## COG: PA2518 COG4638 # Protein_GI_number: 15597714 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 13 451 6 444 455 654 69.0 0 MPRIPVINTSHLDRIDELLVDNIDTGEFKLHRSVFTDEALFDLEMKYIFEGNWVYLAHES QIPNNNDYYTTYIGRQPIIIARNRNGELNAMINACSHRGAQLCRYKRGNKATYTCPFHGW TFNNSGKLLKVKDPTDAGYSDCFNQDGSHDLKKVARFESYKGFLFGSLNPDVPSLEEFLG ETTKIIDMIVDQSEHGLEVLRGSSTYTYEGNWKLTAENGADGYHVSAVHWNYAATTQHRK ETQAADNIRAMSAGSWGKQGGGSYGFENGHMLLWTQWANPEDRPNFPKADEYTEKYGEAM SKWMIERSRNLCLYPNVYLMDQFGSQIRVLRPLSVNRTEVTIYCIAPKGEAPEARARRIR QYEDFFNASGMATPDDLEEFRACQAGYAGIALEWNDMCRGSKHWIYGPDDAANEIGLKPM LSGIKTEDEGLYLAQHQYWLKTMKHAIATEKEIADQGETA >gi|333032498|gb|GL891928.1| GENE 24 17771 - 18271 531 166 aa, chain + ## HITS:1 COG:PA2517 KEGG:ns NR:ns ## COG: PA2517 COG5517 # Protein_GI_number: 15597713 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Small subunit of phenylpropionate dioxygenase # Organism: Pseudomonas aeruginosa # 15 166 11 162 162 197 65.0 6e-51 MSTQDKATLENIAQFLYREARFLDDEQWDDWLECYAPEASFWMPAWDDDDRLTEDPQSEI SLIYYPDRQGLEDRVFRIKTERSSATMPDTRTSHNIANVEVLERDGDKVTVRFNWNTLSF RYKTNYSYFGMSRYVIDFSGDQPKILSKYVVLKNDYINQVIDIYHL >gi|333032498|gb|GL891928.1| GENE 25 18342 - 19358 1095 338 aa, chain + ## HITS:1 COG:PA2516 KEGG:ns NR:ns ## COG: PA2516 COG0543 # Protein_GI_number: 15597712 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Pseudomonas aeruginosa # 3 338 2 335 337 376 52.0 1e-104 MSNHNVALQFEDGVTRFINVAQGETLSDAAYRQKINIPLDCRDGACGTCRAFCESGSYDM PEETYIEDALTPEEAAQGYILACQCRPTSDAVFQIQASSDVCKTEIHSFQGTLARVENLS DSTITFDIQLDEGQPDIHFLAGQYVNVAIPETGETRSYSFSSKPGNRLTGFVVRNVPNGK MSEFLSKNAKTGDKMTFTGPFGSFYLRNVVRPVLMLAGGTGIAPFMSMLQVLEEKGSEQP VRLVFGVTNDFDLVALEKLNELQAKFPWFEYRTVVASPESNHERKGYVTGHIESEWLNGG DVDVYLCGPVPMVEAVRSWLETENIKPANFLFEKFSAN >gi|333032498|gb|GL891928.1| GENE 26 19380 - 20165 1056 261 aa, chain + ## HITS:1 COG:PA2515 KEGG:ns NR:ns ## COG: PA2515 COG1028 # Protein_GI_number: 15597711 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 6 261 4 253 253 310 60.0 2e-84 MSNRQRFTDKVVIVTGSAQGIGRGVALQVAAEGGQVVMADRSEYVEEVLTEIQRTGGDAV TVNADLETYAGAQAVVTKAIEHYGRVDILINNVGGAIWMKPFEEFSEEEIIKEVNRSLFP TLWCCRAVLPAMIKQQAGVIVNVSSIATRGINRIPYSASKGGVNALTASLAFEHAKDGIR VNAVATGGTEAPPRKVPRNANPLSQNEKDWMQQVVDQTKDRTFMGRYGTIQEQVNAILFL ASDEASYITGSVIPVGGGDQG >gi|333032498|gb|GL891928.1| GENE 27 20223 - 21416 1305 397 aa, chain + ## HITS:1 COG:PA1651 KEGG:ns NR:ns ## COG: PA1651 COG3135 # Protein_GI_number: 15596848 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein involved in benzoate metabolism # Organism: Pseudomonas aeruginosa # 11 391 16 396 398 283 39.0 6e-76 MATLFKTLKNDWSISATVAGFLAVLISYSGPLIIFFQAAQRAHVSTDMMVSWIWGISIGA AVSGIYLSIKYKTPVITAWSAPGTALLVTLFPNISLNEAVAAYITSAIVIFLIGITGYFD KLLKWIPQDVAAGMMAGILFQFGISLFTASDSMPLIVFSMLIVFLIAKRLMPRYTMIWVL AAGVLLSLILGKMNPVDVNFNLAIPQWISPEWTWNSTLNLAVPLILVSLTGQFLPGMAIM KLSGYDTPAKPIITATSIASLAVACVGGITIVLASITAALCMGKDAHELKEKRYIAGIAN GIFYILGGLFAGSIVMLFSLLPKELVAALAGLALLGAIATNISVAMKNDGQRDAALITFL ASASGMHFLGLSSVFWGICIGVIAHFILTPRSTPATN >gi|333032498|gb|GL891928.1| GENE 28 21882 - 23240 1300 452 aa, chain + ## HITS:1 COG:PA4900 KEGG:ns NR:ns ## COG: PA4900 COG0477 # Protein_GI_number: 15600093 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 11 438 9 435 446 319 42.0 7e-87 MDTSKVNINELIDKARFTSFHWKVLIWCLLIIIFDGYDLVIYGVALPLLMQQWSLTAVEA GLLASAALFGMMFGAMIFGTLSDKLGRKKTILICVTLFSGFTFIGAFAKGPTEFAILRFI AGLGIGGVMPNVVALMTEYAPKKIRSTLIAIMFSGYAIGGMTSALLGAWLVKDMGWQIMF LIAGIPLLLLPLIWKFLPESLAFLVKSNHSEQAKNIVSKIAPQTQVNANTQLVLNESTTT DAPVRALFQQGRTFSTFMFWIAFFMCLLMVYALGSWLPKLMLQAGYSLGASMLFLFALNI GGMVGAIGGGALADRFHLKPVITIMFIVGSAALILLGINSPQFILYSLIAIAGAATIGSQ ILLYTFVAQFYPTALRSTGMGWASGIGRIGAIIGPVLTGALLSFELPHQMNFLAIAIPGV VAALAIFMVNLKASVAAQTPSTFNPQNTLTQQ >gi|333032498|gb|GL891928.1| GENE 29 23285 - 23692 231 135 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01186 NR:ns ## KEGG: ACICU_01186 # Name: not_defined # Def: putative benzoate transport BenP # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 120 1 120 420 245 100.0 3e-64 MEFVHRFKPCNLAITTLFGLLTSSSLWAADTTQQSEDEWKFTLKNAYINRDFDNDALKDT GSWSQAASLFYKSKMHDTPLIIADKPITIGADASVQYAVRLSSDKHVADTVLPFNKETQS PPPLIKKRNLKHLII >gi|333032498|gb|GL891928.1| GENE 30 23740 - 24576 688 278 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01186 NR:ns ## KEGG: ACICU_01186 # Name: not_defined # Def: putative benzoate transport BenP # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 278 143 420 420 548 99.0 1e-154 MGELWLDLPVTAVDASRQLLASYWGTNLKSQLSDQLYAEIGRVEKVSPRNEEDFKKFSFT ANGITKESDGLNYIDLRYQFTPSLKGEYYFGNLEDLYNKHYVGLEHNWKQPNFALTSKFK YFNAKDDGNTFDIDAQNIGVLETLKVKNHTFGLGYQQIIGESAYPLPDGFLPETYFINWN ATGFFKEDERSYHVMYGYDFKDYVPGLNAMVKYVYGHDFKAANGEKNHETESNVILNYAF QQPLLKGFALQYIRIDYNVKHGNDFGEDRLFVNYTKKF >gi|333032498|gb|GL891928.1| GENE 31 24677 - 25783 1503 368 aa, chain - ## HITS:1 COG:PA3286 KEGG:ns NR:ns ## COG: PA3286 COG0332 # Protein_GI_number: 15598482 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier-protein] synthase III # Organism: Pseudomonas aeruginosa # 24 366 2 350 350 407 58.0 1e-113 MGIRITGTGLFHPTEIISNEELADSLNAYVEQYNQENAEKIAAGELEELRGSSAEFIEKA SGIKRRYVIEKSGILDPTRLRPRLSERSNDELSIQAEWGVIAAKQAMENAGVTAEDIDVV ILACSNMQRAYPAVAIEIQSALGIQGYAYDMNVACSAATFGLKQAADAIRSGARRVLLVN VEITSGHLDYRNRDCHFIFGDVATASIIEETTTKTGFEILDIHLFTQFSNNIRNNFGFLN RSEDAVVDDKLFRQDGRKVFKDVCPLVAKIINAQLEKMQLTANDIKRFWLHQANANMNEL ILKYVAGKDADLSRAPIILDEFANTSSAGVIIALHRTGHEVDDGEYGVISSFGAGYSVGS IVVQKHVA >gi|333032498|gb|GL891928.1| GENE 32 25878 - 29735 3978 1285 aa, chain - ## HITS:1 COG:VC1382 KEGG:ns NR:ns ## COG: VC1382 COG1643 # Protein_GI_number: 15641394 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Vibrio cholerae # 12 1275 30 1302 1309 944 42.0 0 MLNGLNIDQWVMARDRYRLNRLRKDKKANTAEIEKLFEQSNAKVRQRFERLPKIKLNQDL PVTQYADRLIEAIQKHQVIIVAGETGSGKTTQLPQIAMLAGRGLTGMIGHTQPRRLAARS VSQRIAEEVGEKLGESIGFKIRFNEQGSQDSIVRLMTDGILLAELGNDRFLSKYDTIIID EAHERSLNIDFIMGYLKQLLPKRPDLKVIVTSATLDVNRFSNYFNNAPIFEVEGRSYPVE VRYRPISEMNIGGSDDDEFDDFEENLPRAVVQAVEECFADAEEKGHPEHADILIFSSTEQ EIRELQETLQKYGPRHTEILPLYARLAVSEQQKIFSPSGKGRRIIIATNVAETALTVPNI RYVIDSGFARISRYNYRSRVQRLPIEAISQAAANQRKGRCGRVAPGVCIRLYSEEDFLSR PEFTEPEIKRTNLASVILQMQSLGLGELENFDFIEPPDFRLVNDGRKLLIELGALNEKKN ELTKVGQMMARMPIDPRLARMIVGGAHFGVLKEILVVVSALAVQDPRERPADKQMQADQK HALFKEADSDFLFYLKLWDTLNPKGEAGMSENKRRQFAKQHFLSWLRLREWKQTHQQLVE LAEGLKLSFNEKPANYENLHRALLTGLLSFIANKTDERNTFMAVRQQKAKVFPASTLHKT NTAWVMAFEMVETSQVYLRTLAKIDPEWILLAARDLLKYHYFEPHWSKKAGIVNAYAQIS LFGLIIEPKRLVNFEKVDQPAAHEIFLRDALTTGNLGTVPPFLKHNLLKLEEVERVEDKL RRRDLVVDEETIYQFYASKIPEEIASRRSFEDWRATVEAKNPRYLYVEDDALWLNDRPTT QQFPDHLHNGQLRLATTYRFDPSHDEDGATVQIPVQALPQVDENIWSWGIPGWRLDLIEA LLKALPKDKRRNLVPIPDTARKLMQGIDAVHLRQHIFSYLAFALRGEQITEKDFSFERID PYLVPFIKVIDEKGKLIAKGRDLAELKARCRVETHRPVKQQKGEFKTFPENFTFEASQKV TGVVVKQYQALVPTKNFAELEAKDESGVVIQTFNDQAEAIKQHREGIIRLVHMQLGDLVR QLKKQISKPLALAYSPLGDKAKLEQMLVYATLQMAITTLPINADEFNQLLEQVKKQFLSY GQQALEQLSDIYIQWQQIRRQLLVLDPDVFGRSIDDIEDQLDLMSLGNFVYCQPVDLWQE YPRYLKALLLRLDRLPNNLQRDHAAIDDVDPWMDKVFKFKNDPRIKELYLMLEELRISLF SQPMKTKMPISPTRLQKLWDRLGIS >gi|333032498|gb|GL891928.1| GENE 33 30088 - 30651 570 187 aa, chain + ## HITS:1 COG:ECs0644 KEGG:ns NR:ns ## COG: ECs0644 COG0450 # Protein_GI_number: 15829898 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Escherichia coli O157:H7 # 1 187 1 187 187 293 71.0 1e-79 MSLINTEVKPFQATAYHNGQFIEVNETNLKGKWSVVFFYPADFTFVCPTELEDLADNYAE FQKLGVEIYGVSTDTHFTHKAWHDTSDAIKKIQYPLIGDPTWTLSKNFDVLIESEGLADR GTFVIDPEGKIQIVEINAGGIGRDASELLRKVKAAQYVHSHPGEVCPAKWKEGEATLAPS IDLVGKI >gi|333032498|gb|GL891928.1| GENE 34 30844 - 31059 234 71 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002374 NR:ns ## KEGG: ABBFA_002374 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 71 1 71 71 130 100.0 2e-29 MANTAVVTSWKYNATSRHLKIFYSDGSGDLYHPVPEFVYDNLLRSTDKAAFVHKYLEFNL HFTRLSLVIAS >gi|333032498|gb|GL891928.1| GENE 35 31124 - 31711 719 195 aa, chain - ## HITS:1 COG:Cgl0177 KEGG:ns NR:ns ## COG: Cgl0177 COG4122 # Protein_GI_number: 19551427 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Corynebacterium glutamicum # 13 143 12 138 138 100 44.0 2e-21 MPNTIFLQRVADLYDTFKQHDSQQSDRLQRYRNIEVESAQLISQLIRMQQAKSILEIGTS TGYSTLWLAEAAQATGGQVITVEIDAKRSAEAKRHVAELELSEIVQFWVGDAADYLKAAQ EKFDFILLDAERDAYENYWPDLKRLMKPKGGVLVVDNVISHAAEVNRFIALIKKDPDYMS SILSVGAGLCLVVTK >gi|333032498|gb|GL891928.1| GENE 36 31748 - 31966 208 72 aa, chain - ## HITS:1 COG:PA3012 KEGG:ns NR:ns ## COG: PA3012 COG4728 # Protein_GI_number: 15598208 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 69 38 105 124 95 62.0 3e-20 MSLQRGIYQHYKGNLYQVFSVAKHSETEEELVVYQCLYGDYSTWVRPLDMFTETVQMSDG SVVPRFKLIQST Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:28:13 2011 Seq name: gi|333032497|gb|GL891929.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld383, whole genome shotgun sequence Length of sequence - 801 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 21/0.000 + CDS 8 - 337 391 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 2 1 Op 2 . + CDS 356 - 800 525 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit Predicted protein(s) >gi|333032497|gb|GL891929.1| GENE 1 8 - 337 391 109 aa, chain + ## HITS:1 COG:RSc2254 KEGG:ns NR:ns ## COG: RSc2254 COG1788 # Protein_GI_number: 17546973 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Ralstonia solanacearum # 2 108 116 222 229 157 70.0 4e-39 MGLGAVFTPTGFGTLLAEGKETRHIDGKDYVLEYPIKADFALIKAYKGDRWGNLVYRKSA RNFGPIMAMAADVTIAQVSEVVELGGLDPEHIITPGIFVQHVVQVQPAQ >gi|333032497|gb|GL891929.1| GENE 2 356 - 800 525 148 aa, chain + ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 4 148 10 154 220 216 73.0 2e-56 MSYQKLSRDQIAKRVAQDIPDGAYVNLGIGLPTKIASYLPADKDVFLHSENGLLAFGPPP AAGEEDPELINAGKEFVTMLEGGSFFHHGDSFAMMRGGHLDIAVLGAFQVAANGDLANWH TGAPDAIPAVGGAMDLAVGAKKVFITTD Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:28:14 2011 Seq name: gi|333032496|gb|GL891930.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld384, whole genome shotgun sequence Length of sequence - 747 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 309 171 ## ABAYE2709 hypothetical protein 2 1 Op 2 . - CDS 311 - 679 381 ## AB57_2692 hypothetical protein Predicted protein(s) >gi|333032496|gb|GL891930.1| GENE 1 3 - 309 171 102 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2709 NR:ns ## KEGG: ABAYE2709 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 102 16 117 147 213 99.0 2e-54 MAMTLEQTRQAIIDRMQSFTGIAQERIQYPNAPDFTVPTKGVWCRLTIAGGPSFTSGIAD KPCTRRTGNIMIQCFDRLHTGEKAVTVLSDALLAHFEYFTIE >gi|333032496|gb|GL891930.1| GENE 2 311 - 679 381 122 aa, chain - ## HITS:1 COG:no KEGG:AB57_2692 NR:ns ## KEGG: AB57_2692 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 122 1 122 122 241 98.0 1e-62 MGWKGKKPTEFSFDVSKAAEDHVKHIVMDTVQSLVNLSPVDTGAYRASHIVSVGSADFGV REPETNPINDAAIQAMKIKLGNLVYIQNNKAYAPRLENGWSDQAPQGIYGLTFNFISQKY GG Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:28:28 2011 Seq name: gi|333032495|gb|GL891931.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld386, whole genome shotgun sequence Length of sequence - 28425 bp Number of predicted genes - 39, with homology - 39 Number of transcription units - 19, operones - 10 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 169 116 ## A1S_2039 hypothetical protein 2 1 Op 2 . + CDS 166 - 1167 851 ## ACICU_01002 hypothetical protein 3 1 Op 3 . + CDS 1169 - 1426 120 ## AOLE_15130 hypothetical protein 4 1 Op 4 . + CDS 1417 - 1626 270 ## gi|332875465|ref|ZP_08443287.1| hypothetical protein HMPREF0022_02923 5 1 Op 5 . + CDS 1623 - 1907 268 ## gi|332875466|ref|ZP_08443288.1| conserved domain protein 6 1 Op 6 . + CDS 1911 - 2168 204 ## gi|332875467|ref|ZP_08443289.1| hypothetical protein HMPREF0022_02925 7 1 Op 7 . + CDS 2169 - 2438 188 ## ACICU_02234 hypothetical protein + Term 2439 - 2465 -0.7 - Term 2385 - 2428 7.0 8 2 Tu 1 . - CDS 2435 - 3706 607 ## COG0582 Integrase - Prom 3727 - 3786 5.9 9 3 Op 1 . - CDS 3836 - 4873 1057 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Prom 4894 - 4953 3.5 10 3 Op 2 . - CDS 4966 - 5685 491 ## COG2771 DNA-binding HTH domain-containing proteins - Prom 5800 - 5859 7.7 - Term 5863 - 5897 3.0 11 4 Tu 1 . - CDS 5928 - 6161 246 ## ACICU_01852 hypothetical protein - Prom 6193 - 6252 6.0 12 5 Op 1 . - CDS 6273 - 7073 626 ## ACICU_01853 hypothetical protein - Prom 7103 - 7162 5.7 - Term 7112 - 7153 6.1 13 5 Op 2 . - CDS 7173 - 7727 209 ## ACICU_01854 hypothetical protein - Prom 7823 - 7882 5.9 - Term 7824 - 7862 5.3 14 6 Op 1 . - CDS 7938 - 8237 223 ## ACICU_01855 hypothetical protein - Term 8264 - 8302 -0.2 15 6 Op 2 . - CDS 8305 - 8496 235 ## ACICU_01856 hypothetical protein 16 6 Op 3 . - CDS 8505 - 8858 339 ## ACICU_01857 hypothetical protein - Prom 8906 - 8965 5.6 17 7 Tu 1 . - CDS 9600 - 9743 66 ## gi|332875480|ref|ZP_08443301.1| hypothetical protein HMPREF0022_02937 - Prom 9948 - 10007 5.7 18 8 Op 1 . - CDS 10190 - 10897 357 ## ACICU_01859 hypothetical protein - Term 10935 - 10964 -0.4 19 8 Op 2 . - CDS 10975 - 11673 510 ## ACICU_01861 hypothetical protein - Prom 11771 - 11830 7.2 - Term 11777 - 11806 0.3 20 9 Op 1 . - CDS 11875 - 12123 192 ## ACICU_01862 hypothetical protein 21 9 Op 2 . - CDS 12134 - 12424 101 ## ACICU_01863 hypothetical protein - Prom 12608 - 12667 4.3 22 10 Op 1 . - CDS 13033 - 14427 1221 ## ABSDF1964 putative methylenetetrahydrofolate reductase (EC:1.5.1.20) 23 10 Op 2 2/0.000 - CDS 14501 - 15268 689 ## COG1051 ADP-ribose pyrophosphatase - Term 15276 - 15319 6.1 24 10 Op 3 . - CDS 15329 - 16822 1586 ## COG1488 Nicotinic acid phosphoribosyltransferase 25 10 Op 4 . - CDS 16834 - 17718 707 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 17838 - 17897 6.5 - Term 17743 - 17777 3.8 26 11 Tu 1 . - CDS 17900 - 18709 695 ## COG0730 Predicted permeases - Prom 18737 - 18796 6.0 + Prom 18718 - 18777 5.5 27 12 Tu 1 . + CDS 18808 - 19596 683 ## COG2207 AraC-type DNA-binding domain-containing proteins 28 13 Op 1 . - CDS 19591 - 20079 436 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 29 13 Op 2 35/0.000 - CDS 20082 - 20846 209 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 30 13 Op 3 33/0.000 - CDS 20843 - 21808 593 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 31 13 Op 4 . - CDS 21856 - 22875 698 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component - Prom 23007 - 23066 7.2 + Prom 22856 - 22915 4.4 32 14 Tu 1 . + CDS 23075 - 23233 149 ## ACICU_01876 hypothetical protein + Term 23253 - 23309 5.8 - Term 23240 - 23297 17.0 33 15 Op 1 1/0.750 - CDS 23306 - 24358 1108 ## COG1064 Zn-dependent alcohol dehydrogenases 34 15 Op 2 1/0.750 - CDS 24414 - 25052 604 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 35 16 Tu 1 . - CDS 25165 - 25659 442 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 25803 - 25862 4.0 + Prom 25784 - 25843 5.2 36 17 Tu 1 . + CDS 25868 - 26752 565 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 26785 - 26831 6.6 37 18 Op 1 2/0.000 - CDS 26848 - 27720 827 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 38 18 Op 2 . - CDS 27720 - 28169 511 ## COG0477 Permeases of the major facilitator superfamily - Prom 28190 - 28249 73.2 39 19 Tu 1 . - CDS 28251 - 28424 192 ## ACICU_01882 major facilitator superfamily permease Predicted protein(s) >gi|333032495|gb|GL891931.1| GENE 1 2 - 169 116 55 aa, chain + ## HITS:1 COG:no KEGG:A1S_2039 NR:ns ## KEGG: A1S_2039 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 55 319 373 373 104 96.0 1e-21 DQQRDELQNFIAERGLDVKTVCEHFGIDALIQIEEAKLPAVKQDIETLAKTGMTA >gi|333032495|gb|GL891931.1| GENE 2 166 - 1167 851 333 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01002 NR:ns ## KEGG: ACICU_01002 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 333 1 310 310 451 75.0 1e-125 MKILNKVEAKLAWANGELLLVNNTERNGWEPFNPYDFGFDVFDKFEFQLKPRTIFIGEFE VPEPLKEAPAKGSTCSYPSPTVELGVQQFKWNGSKGQLRMLQHGQVHSSFDNAFAHCCAI IKVSGGEFAEDMLKLLNKPTDEVEEEKPLENEVEKSPQVNTEKTVIEEPTKDLKEDLDSA IVVTEGPYVSSSEDLLVPETNEPKVDPEYQQTLDTLLQRVKESKTPAEVNAVYRYTRKWD DEQMKPILLATHKRLEELEKEQASANEPPSLMVQIQNAPDLTTLDALEIDVAARDPQIQP KLMGYVRKRRYELENPTPTQPEADPDYLLVDGY >gi|333032495|gb|GL891931.1| GENE 3 1169 - 1426 120 85 aa, chain + ## HITS:1 COG:no KEGG:AOLE_15130 NR:ns ## KEGG: AOLE_15130 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 81 1 81 81 147 97.0 2e-34 MKDQFKKVNNKHLLGFTNYLHLLGFVIVQQGLNQAMLLTKHYAVPVAWRRITIDYNNRLN KPAQQLYKEFVEWTKEEYLRAQKWK >gi|333032495|gb|GL891931.1| GENE 4 1417 - 1626 270 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875465|ref|ZP_08443287.1| ## NR: gi|332875465|ref|ZP_08443287.1| hypothetical protein HMPREF0022_02923 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02923 [Acinetobacter baumannii 6014059] # 1 69 1 69 69 133 100.0 6e-30 MEVRIKSVNGPSPLPANLQMDVVYKAVRIDANRMKVTCDDGQVITTSISKSGYLGDWGEW EILSEDSQQ >gi|333032495|gb|GL891931.1| GENE 5 1623 - 1907 268 94 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875466|ref|ZP_08443288.1| ## NR: gi|332875466|ref|ZP_08443288.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 94 1 94 94 171 100.0 2e-41 MSKVIGEVNLSPSSIEGTPDQVAVHIFEKIICPSTEELLKNNPEAAKVFAYHIFGLALSQ LAEFHSTKSLDKAVTVTLHNLLRQLKKERNELRS >gi|333032495|gb|GL891931.1| GENE 6 1911 - 2168 204 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875467|ref|ZP_08443289.1| ## NR: gi|332875467|ref|ZP_08443289.1| hypothetical protein HMPREF0022_02925 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_02925 [Acinetobacter baumannii 6014059] # 1 85 1 85 85 161 100.0 1e-38 MSEVKVKTCDFCDDGNGECIFPYYGLAPHIHTKPIGGTVFLDGSLPENFCPDGDGLGMYT HCLNCGGDGTYEGTQLEVKAESKEE >gi|333032495|gb|GL891931.1| GENE 7 2169 - 2438 188 89 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02234 NR:ns ## KEGG: ACICU_02234 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 89 1 89 89 161 100.0 8e-39 MLKDLRNLSDAEQQEYLDRFIMANEEQKFPQEVVALYLDCSPWTLARMRCDQSSLPFSKI GRRVSYKKKDVLKYEQSKTVLNTAQLATV >gi|333032495|gb|GL891931.1| GENE 8 2435 - 3706 607 423 aa, chain - ## HITS:1 COG:XF0631 KEGG:ns NR:ns ## COG: XF0631 COG0582 # Protein_GI_number: 15837233 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Xylella fastidiosa 9a5c # 2 375 3 373 413 87 24.0 6e-17 MKLNKSTVDAIPLTEKGQKIYRDAELIGFAVRVTNKSKTYIVERRHEGELYRVTIGKTTD IPATNARAKAQMILAKISNNEYEKPIKLKKVANPLDITVNEALQIYIDRNDFRPKTIRQY RKYFDLYLGWGNKKLFQISKQEVLDRFIEVSEVSESSANGAVSLLGTLWKYIHVLYSTDE NPILKSNPVDIISVTRGWNKIESRDRHLHKDIIHKYYNAVLHYEDELNLENTARSNTHRD IVLMCMYTGCRKQEACCLKWSDVDIKNGTLTFRDTKNGSDHTFPIGDHLHSILRERWLLR ENDWVFPATKMPTSWNMHATKVDTLLNRVGKEVDYYVSMHDFRRTFATICNLLRFNIYVT KRLLNHTAKPRIDVTGGYVQIPDEELRASMNMIEAVYQGKIDCFNYQSVWAERLKEIKAV YPP >gi|333032495|gb|GL891931.1| GENE 9 3836 - 4873 1057 345 aa, chain - ## HITS:1 COG:AGpT48 KEGG:ns NR:ns ## COG: AGpT48 COG0154 # Protein_GI_number: 16119822 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 28 329 14 309 467 211 41.0 1e-54 MLNTNEKNNAIESLDLSNASVDIITKLIHERKVSCEELVHHYFDTIEKQQALNAFISTDK ASAIQQAQYWDKYLLSGKPCPALMGILIAVKDNIHVAGFPNSAGTPALAHFKPQTSAPVI QKLIDQGAIIVGKANMHELAFGVTGYNTAMHIEGVVGTRNAVNPLHIAGGSSSGSAVAVA VGMVPIAMGTDTGASIRLPSALNGCVGFRPTVGRYSQEGITPISHTRDTAGPIAHTVSDV ILIDELITQEPRKESLQSHQIRLGINSYFWNHLDEDVHEQAHIALELLKSAGVEIIPVDM PNLEQLNQAISFPVAIYEGKYDLIQYLKDHHVNSFIIYLWFLYFY >gi|333032495|gb|GL891931.1| GENE 10 4966 - 5685 491 239 aa, chain - ## HITS:1 COG:RSc3373 KEGG:ns NR:ns ## COG: RSc3373 COG2771 # Protein_GI_number: 17548090 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Ralstonia solanacearum # 34 172 29 167 336 72 28.0 6e-13 MTVLLEKDLSPSEFTLFSEILWKLGSGKGQYNLRESILADIAILLRADFAASYIWDSTHN LSREGVIWKIDPKAMKDYECVWQFNDPITAQLRKRQKPTFVNEVMPLADLKKTPYYNEFL RAYGLYHGINIYFVRNGMDIGDLRIWRAKDADTFGEREKRILNLLEPYFTQALPLDLSTQ YGLTSREQEVVRLVSKGLSDKDVANLLDISFTTLRTHLNNSMRKIGCNNLTEMALLIRH >gi|333032495|gb|GL891931.1| GENE 11 5928 - 6161 246 77 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01852 NR:ns ## KEGG: ACICU_01852 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 77 1 77 77 152 100.0 4e-36 MISLFGCANSTAKHQDKFLAHIHENTPNPYKECMVKYIKDHWDEVWKTYNTEKTGEARGE TDIVNFMIGKYLSECKK >gi|333032495|gb|GL891931.1| GENE 12 6273 - 7073 626 266 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01853 NR:ns ## KEGG: ACICU_01853 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 266 1 266 266 443 100.0 1e-123 MSEEIISAIATIKGAQIQAYYTLIASCVGAVGIVVGIILSWYTALHLQKVSRLAETRKTV YLEFAEAYSKLIAGLQLIQIEKHKYQSELFSSFSNFSTCTDKVMFVCNTKTKKEVVCYLN NILPKIELIIFEIASYFDLSQSLEVLVKDHQESLESLDRFYLKLDELHIDNPEDERSKNI FKLIDFKLKQSERLIQPISEKEKELEEKHEEIAENIKKFTNELNEGVTEVIYLLRKEIGA KTDIHLDKKLSINYQSQLPKKEDELK >gi|333032495|gb|GL891931.1| GENE 13 7173 - 7727 209 184 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01854 NR:ns ## KEGG: ACICU_01854 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 184 1 184 184 365 100.0 1e-100 MKNYLIGLVISLGLTGCVVLPNIDYSQPKVERFNPVKNWISVDSASVKDMPNGNEIFKLK GGSEVYVFRYQDEWALLTPASDKQQWINFRYLCGFAGCYTPPIVYRNTKRGLDNQQPIYS VQQHEPKRYSNTKTRSISTNTRTSRSYSQTTNSSCYCTSGTYCVGPRGGHYCLNSTGSKR YLPR >gi|333032495|gb|GL891931.1| GENE 14 7938 - 8237 223 99 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01855 NR:ns ## KEGG: ACICU_01855 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 99 1 99 99 190 100.0 2e-47 MELTQIKVTIDREYDLFVNSHEFKTYQHDKEKQARFLGHALTTLKYPYTNIITLGGGRYK VVGHHDLNVDIDLFQAPSFVSKQAFNTWFANILSQHLYS >gi|333032495|gb|GL891931.1| GENE 15 8305 - 8496 235 63 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01856 NR:ns ## KEGG: ACICU_01856 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 63 1 63 63 70 100.0 3e-11 MQNQNEQINNVEQLDTENEQKQENSVLNSVNPDLVEVKDLIVEIGKDIVDFASSVFDNID INF >gi|333032495|gb|GL891931.1| GENE 16 8505 - 8858 339 117 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01857 NR:ns ## KEGG: ACICU_01857 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 117 1 117 117 229 100.0 4e-59 MSVGSLLHAEENESTVCEKLNSAAYQIMLERQSGIKPLDLLEKLLIPLDRDKENLILNYH INHFFGHVSGLAYETPLYTKEDEKQKAATDFGLRIERICRKDKTALFAPPRFQTFEE >gi|333032495|gb|GL891931.1| GENE 17 9600 - 9743 66 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875480|ref|ZP_08443301.1| ## NR: gi|332875480|ref|ZP_08443301.1| hypothetical protein HMPREF0022_02937 [Acinetobacter baumannii 6014059] Hypothetical protein ABK1_2321 [Acinetobacter baumannii 1656-2] hypothetical protein HMPREF0022_02937 [Acinetobacter baumannii 6014059] # 1 47 1 47 47 85 100.0 2e-15 MCDSFEKIISLLANIATILGAILAFVVWSTWKEQQNYSFTRDKIFKC >gi|333032495|gb|GL891931.1| GENE 18 10190 - 10897 357 235 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01859 NR:ns ## KEGG: ACICU_01859 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 235 1 235 235 475 100.0 1e-133 MDNQNRNIYYNLELLQAISNWQAGSNEKKGNKLKELCVNLPEKFRLLPPNLVLFRQISLD NVGLSRFLREKKLPEKISSWTTDYKFAEKFKGGVPSELGDFKATIFKTTPLNNQVIVSLS ELYKCSDFCNAMKLNKNKIDRYHDGAGKYWDTQSEVIMATEYLDHSNIYSMGGYSGTPEQ IAEQASREKNIPISLTIDDIKELSRDYIGPWWLSPEGTRRAVARTLEIARNRGML >gi|333032495|gb|GL891931.1| GENE 19 10975 - 11673 510 232 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01861 NR:ns ## KEGG: ACICU_01861 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 107 184 98.0 4e-45 MAYVMMLARVFSSEKYANEFINNGKFRLNTLNFFKGYKEELSNNIGDQYEGISFRATGEQ EVKVTIEYNNESHEIEVNEIYTHDNYVLNNNIFCMYAPAVEQEKKFTLEDIQEIVAFQKD AENLGNYLVLIANPEEFFERFAKTVKKLGYKMKRDLVEYVDFNNSVHVPRDKIGFVKSDQ FSHQKEYRLMIDDGRNVDEHIDLEIGSLADITYLIPTEDFNKSLEIKVKEEN >gi|333032495|gb|GL891931.1| GENE 20 11875 - 12123 192 82 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01862 NR:ns ## KEGG: ACICU_01862 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 37 1 37 40 65 100.0 5e-10 MAWKFIKLDKVVSQKECNNFLEKEENKKLLKLLRIQKTCADGAITLKLYPKEGVLIEDAL GVAYALIGLMVANYLQIDAHDI >gi|333032495|gb|GL891931.1| GENE 21 12134 - 12424 101 96 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01863 NR:ns ## KEGG: ACICU_01863 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 96 1 96 96 171 100.0 1e-41 MREADRELPKGKSYIRCEISDYEADQIQALLRSLLKSDKTDFTTKFALICLIKNKVENKG LGKVAQETNQSKAQAAIMVSCARFYIAGHDKRLKNQ >gi|333032495|gb|GL891931.1| GENE 22 13033 - 14427 1221 464 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1964 NR:ns ## KEGG: ABSDF1964 # Name: not_defined # Def: putative methylenetetrahydrofolate reductase (EC:1.5.1.20) # Organism: A.baumannii_SDF # Pathway: One carbon pool by folate [PATH:abm00670]; Methane metabolism [PATH:abm00680]; Metabolic pathways [PATH:abm01100]; Microbial metabolism in diverse environments [PATH:abm01120] # 1 464 7 470 470 936 96.0 0 MSHVSPCFQQNQFFMLVEYLTSLHEIYPVKHEFAGYPAAMTLADRVHSDHDIAPLEASKS YPDSIEKVLHFSGKARDIQDFERFLEQAKSANIQNLLLLTGDKLKEHHNGRDGQPRSRYL ESVNAVMAAKQHGGFRIGVAFNPFKYVEAERDAQYLKLHKKIKAGADFIITQLGYDIEAL KQAKSFLTKHDYSQQILACVMPLTLGRANFMVKHKVAGIVITPHMLKVLAGEKQAGHTDR VYLRCALQILICKHLGFAGIHLSACHKPEEQMLLESYIEQYRHLNLKALEELWSSLWQVK TGKEFTPEIARFSRQPTSKQLIKYRQLHVMHEAMFGSKIAKGVGRFIFKASFWENALIAK LLLKTEVLSKHSLVGCESCGQCRLGDTLYICPETCPKGLANGPCGGTTLDRCEFGDRECI HSVKARLAKAVKQTEILKEKLIPTVPLETRGTSSWKNWYLATEA >gi|333032495|gb|GL891931.1| GENE 23 14501 - 15268 689 255 aa, chain - ## HITS:1 COG:DR0192 KEGG:ns NR:ns ## COG: DR0192 COG1051 # Protein_GI_number: 15805228 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Deinococcus radiodurans # 23 225 15 217 225 127 37.0 2e-29 MTIQNEQEFLASYDRRDYDAPLLTVDMAIFSVLNGQLQVLLIKRPNFPAKNQWALPGGFA DLTHDQDLMATAYRKLVEKTGIASPYLEQVASVGNSKRDPRGWAVTILYFALIDFNAYQH QALAEYSEWVPVAKAQDLALAFDHNELLNLALERLTNKTRYTALPASLMPELFTLTELQN IYEIILGQSLDKKAFRRRMIEAGAVEETNHSKIVGKRPAQLYRYALDSFDFIFPRSLELP RNKEGEGKQNNELSD >gi|333032495|gb|GL891931.1| GENE 24 15329 - 16822 1586 497 aa, chain - ## HITS:1 COG:RSp0836 KEGG:ns NR:ns ## COG: RSp0836 COG1488 # Protein_GI_number: 17549057 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Ralstonia solanacearum # 6 493 14 471 483 256 35.0 1e-67 MTIKLNPLNAIDFYKADHRRQYPAGTECVYANFTPRSSRLAKMLPDFDDKVVFFGLQGFI KHFLIDTWNEGFFKQPKDKVVAAYKRRMDSSLGEGAVPVDHIEALHDLGYLPLRIKALPE GSRVNMRVPVLTVINTDPRFFWLTNYIETVLSAELWKSCTTATIAYEYKRLLTQYAVKTG APLDFVPVQGHDFSSRGMSGIYDAAQSGVGHLTSFIGTDSVASIDYAEEYYNATGVIGVS VPATEHSVMCMGTEDSELETFKRLICQLYPSGVVSIVSDTWDFWRVITEFTVALKPEILA RQPNALGLAKLVFRPDSGDPVKIICGDPDAEVGSRAYKGAVECLWEVFGGTTTDQGYKVL NERVGLIYGDSITLDRAQRILEGLEAKGFASNNLVFGIGSFTYNYLTRDTFGFAVKATWG QVNGVGRELFKDPITDSGVKKSAKGLLRIEESENGFILFDEQTAEQEQGGALKTVFENGK LQYECTLDQIRERLSIA >gi|333032495|gb|GL891931.1| GENE 25 16834 - 17718 707 294 aa, chain - ## HITS:1 COG:PAB1114 KEGG:ns NR:ns ## COG: PAB1114 COG0462 # Protein_GI_number: 14521898 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Pyrococcus abyssi # 11 294 20 277 282 93 27.0 4e-19 MAIQLLDTARNEIPVKFTQFSGGERHVQIDETTLGSLYGNVLVRAHMASSHDVMDYLLLE NILLTQGLTIDLEVPYFPYARQDRICAVGQAFSLDVMTKLLNINADKKVGKQGKVTVWDC HSEVTTALLAANTSFSEVVNISSVDIIAKSEALSTLLKDEKTVLVCPDKGAKARTQRVAD AFNSERKQPLTIVHCDKKRDPVTGKILGTHVHATDLSGLTAVITDDICDGGATFIGIAKE LRRLNCHKVVLYVTHGIFSKGIEVFNGLLDQLFTSDSFPQQPSDKISVIAFAAK >gi|333032495|gb|GL891931.1| GENE 26 17900 - 18709 695 269 aa, chain - ## HITS:1 COG:PA0790 KEGG:ns NR:ns ## COG: PA0790 COG0730 # Protein_GI_number: 15595987 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Pseudomonas aeruginosa # 5 266 6 269 271 152 43.0 5e-37 MLYELFLFGLLSGITTWLFGFGGGFVAVPLLYTVIIQKWSNESSVGIHAMQIAVATSAFV MLCSASFATFRHYRSGHIDWQQIRFLWGGIALGGIVGAVMASLFNGNWLRWIFMSYVFIT IIDCYYRPGFMVTSRQKQHYGQNSELIKGGIIGWVAALLGVGGSVMTVPLLRRRGSSMAE AAAIANILTLPLSLTATLTYCVLSIWQSTWTPNGFIGLIWFEAALFLVAGTWIGLYFSEK FISKLPDLWRAKLYPLLLIIVLLVMLFLN >gi|333032495|gb|GL891931.1| GENE 27 18808 - 19596 683 262 aa, chain + ## HITS:1 COG:PA0791 KEGG:ns NR:ns ## COG: PA0791 COG2207 # Protein_GI_number: 15595988 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 1 252 1 252 262 230 46.0 2e-60 MRNIPINDVDHLPQAVLALGSDYPADTLLDTHSHRRAQFLYAPEGLMKVETEDGQWLVLP YSGVWIPAGKPHRVWLSKVSTYSLYIEVSNAPRQANYCEVIQVSPLLHQLLIQANQLPID YQRAGRDGSLIDLLLYELEAAPALPLFIPLPHNTLLSKQCADFMQHPDIHSSPKDWAHDH NKSERTFHRWFKTETGMSFQAWRNRVCIIYALNALKENISITEIAFSLGYEHSAAFTAMF SKIMGYPPTHFQKRFHTHDKAL >gi|333032495|gb|GL891931.1| GENE 28 19591 - 20079 436 162 aa, chain - ## HITS:1 COG:UU555 KEGG:ns NR:ns ## COG: UU555 COG0454 # Protein_GI_number: 13358119 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Ureaplasma urealyticum # 8 162 7 169 169 112 39.0 4e-25 MTLYYQLVGKSDYRSAVEFALYTRQLLFPEIYHGQIPKDLQNFEQHYVYDPLGCFITVKD QNRIIGTIAYRAYDHRFDLNLPLNTVEVVKLFVLPEYRRNGIATMLCKMLFSHAKNHAIT SLYLHTHPFLPAAEEFWTLQGFEVIQREWTDTYDTIHMSKSL >gi|333032495|gb|GL891931.1| GENE 29 20082 - 20846 209 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 224 1 228 245 85 25 5e-16 MIQIDQLNYAYGHKQVLKNIHLEFPENQFSVILGRNGCGKSTLFKLMAGLEPVKDGLIRY SGKALSDFKGKDRAALLGFLPQFHKTVFPFLVKDVVITGRAAFSRYRPSKSDWERVDQAL LDLDIEHLRDRPYTELSGGERQLVMIARILVQAPKVILLDEPTNHLDVYYQSYLMKKLRQ LSRQNFTVIAIMHDPNLAFLFADHLFFMRQHEVVKPESKTRITDPKFLKSVYDVEFHEAM IQDKTIVIPDHSWL >gi|333032495|gb|GL891931.1| GENE 30 20843 - 21808 593 321 aa, chain - ## HITS:1 COG:MA4605 KEGG:ns NR:ns ## COG: MA4605 COG0609 # Protein_GI_number: 20093389 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 44 317 78 350 355 221 45.0 2e-57 MIFISLLIGPTQTLSAWDYLFWGVQAVFGTPYFDAEQFRLMQNILVNVRLPRILLTFMVG AALATAGNGLQALFRNPLVDSYVLGISSGAAFGAALALSLSWLSPNLSAFIFGVCAVALT YLFAHQKHESQTSLVMVILSGMIVSGLFLAGLTVIQYLSDPFKLQAIVQWTMGNLHQASW QKVQYAVLPICIGLAGLFAMRWRLNLMALGAEEAQAVGVNPRWEQLLLIALVTVCTSTSV AAAGIISLYGLFMPHIVRMLVGPDHRYSIPANMVLGGSFLLMIDNFSRVLLTFEIPIGIF TMLLGAPFFLLLMKTQRTHWA >gi|333032495|gb|GL891931.1| GENE 31 21856 - 22875 698 339 aa, chain - ## HITS:1 COG:MA4604 KEGG:ns NR:ns ## COG: MA4604 COG0614 # Protein_GI_number: 20093388 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 7 330 12 362 371 106 24.0 7e-23 MKLLASLLTLLILCGCSSSEQNRKTQENSTSHSICVFDSTNTKVCVAKPAQRIVSLFESG LDGLYMLGQGDKVIGIPAEVYIQPLLFNAYSKIDKRIANKQLAAPSQGANATNIESLVLL KPDLVIVGSGQTQTIELLRQFGIAVYVMESGTYKQVKEELSEIAILSGAQKRAQEILNFS DEIVAEVAAKTARQPNKQSIYYAWSGGRIFSTSGRESITNDFIELAGAYNIVQTNANQPN VNPETLIEWNPDNIVLWNTNPKLIYERKELQGLSAVQNRKVFNLSPAFIYNPHTIKIIIT AIYLNHSIYPEQSDLPVSALQQRILTKLYGEQLAKVLMQ >gi|333032495|gb|GL891931.1| GENE 32 23075 - 23233 149 52 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01876 NR:ns ## KEGG: ACICU_01876 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 52 1 52 52 70 100.0 2e-11 MIGQKVYKSESNNLIMFIAVSLVLGLSLSVFGFSILFKLFIFAMHKYIPSKS >gi|333032495|gb|GL891931.1| GENE 33 23306 - 24358 1108 350 aa, chain - ## HITS:1 COG:RSc0632 KEGG:ns NR:ns ## COG: RSc0632 COG1064 # Protein_GI_number: 17545351 # Func_class: R General function prediction only # Function: Zn-dependent alcohol dehydrogenases # Organism: Ralstonia solanacearum # 4 350 2 350 352 487 64.0 1e-137 MTTEVLGYAALSSETPLVPFKFERRTPREDDVVIQIEYCGVCHSDLHQAKNDWGFSAYPL VPGHEIVGRVTSIGPKVTKYKVGDLVGIGCMVDSCRTCSACHSGLEQYCEEGNIQTYGGV DRHDQRPTYGGYSQSITCSQDFVLKVPENLDAQAVPPLLCAGITTWSPLRHWNVGKGSKV AVVGLGGLGHMAIKLANALGAEVTLFTRSANKEQDAKQLGAHHVVLSTDENQMKSVLNQF DLIVDTVPYNHDLKPYIPTLALNGTIVLVGYLGEISANSVPMILGRKSIAGSVIGGIKET QELLDFCGEHNIVSEVEMINMQNINEAFERMLKSDVKYRFVIDMKTLSED >gi|333032495|gb|GL891931.1| GENE 34 24414 - 25052 604 212 aa, chain - ## HITS:1 COG:XF1766 KEGG:ns NR:ns ## COG: XF1766 COG0599 # Protein_GI_number: 15838367 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Xylella fastidiosa 9a5c # 4 204 49 250 260 199 52.0 2e-51 MQNSLSEQQQAIIPIAAYAANGDLAKLSQSLKDGLDLGLTIAEIKEVLVQTYAYAGFPRS LNALTTFMQVLEQRKESGIRDIEGKTNSTLPKDYQALLQGTQNQTQLVGQPVKGALFDFA PAIDEYLKAHLFGDIFSRDVLNWQDREIATLSMLSALEGVDSQLQSHLNIAKTQGVSSHQ FENIQKILAEKVSLQVGQRFQNVLTSFHNQSL >gi|333032495|gb|GL891931.1| GENE 35 25165 - 25659 442 164 aa, chain - ## HITS:1 COG:AGl997 KEGG:ns NR:ns ## COG: AGl997 COG1917 # Protein_GI_number: 15890615 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 32 159 23 149 151 116 46.0 2e-26 MNVKAVTFVTSLFISMGVPAMDKKSVTAFQTVKKANQQQVITGLDNIFTGQVAIKPLTDV TDSINASSAYVSFNANARSFWHTHPKGQYLIVTEGEGLVQEWGKPAEKISVGDVIYCPPG VKHWHGASGNSAMTHLALTATDEHGKNVDWLEPVSDEQYKEAGH >gi|333032495|gb|GL891931.1| GENE 36 25868 - 26752 565 294 aa, chain + ## HITS:1 COG:RSc0625 KEGG:ns NR:ns ## COG: RSc0625 COG2207 # Protein_GI_number: 17545344 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Ralstonia solanacearum # 8 294 19 305 321 263 45.0 3e-70 MANRSNHNQELAQLVDQWTREKGTFETAITGLTLYRAETLTKPSSSMMDASLCMIAQGKK QVILSEETYTYDSNHFLFTAIDLPVIAQVLEASVEQPYLSIVLRLDPYLLAQIMLEAHIP FKDVNTEKKGMAVGVVNSELNDAFIRLIKLLDTPQDIPILSPLIIKEIFYRLLMSPQGDR LKRIVAAGTTGHRIVKAIEWLKTNFAKPFSIEELASTMGMSASSFHQHFRDITSMSPLQY QKRMRLTEARRLLMTEEYDISSTSMQVGYESLSQFSREYKRFFGVSPSVDIKNI >gi|333032495|gb|GL891931.1| GENE 37 26848 - 27720 827 290 aa, chain - ## HITS:1 COG:AGl3303 KEGG:ns NR:ns ## COG: AGl3303 COG2084 # Protein_GI_number: 15891770 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 288 14 298 315 264 49.0 2e-70 MARIGFVGTGIMGMPMAMNLLKAGHQVKVWNRTSSKAVSLKEAGAYVCSELEQVGKDVEF LICMLSDGKTCDEILFQERGAISQLKPESTVIVMSSIPVEVAKKQSEKCKENGLRYLDAP VSGGEKGAQNASLAIMVGGDAQTFSHAEHVLSAMGRPILVGEAGCGMLAKLVNQMIVAST IATVSEGLLLASKAGADPIKLKQALTGGFADSPILQQHGERMLNRDFKPGGTARNQHKDI HTAVSYAKSLELNLPIAQKVSQLFENMLAAGDGELDHSGLIRELERMNHV >gi|333032495|gb|GL891931.1| GENE 38 27720 - 28169 511 149 aa, chain - ## HITS:1 COG:YPO1768 KEGG:ns NR:ns ## COG: YPO1768 COG0477 # Protein_GI_number: 16122022 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 1 130 320 449 455 81 34.0 5e-16 MVLWSRRSDRKQERYKHGACAALMAAFAIAIALIVNQPWAIIVGFILLAIGVFSAINIFW TIPGQTLTGVGAAAGIGLINSVGNLSGFTGPYLTGYLYTTTGTYTVAFLAIAGFVAMGGL GLLLLAKLKSDSLKVEQQRLKVRTATEMK >gi|333032495|gb|GL891931.1| GENE 39 28251 - 28424 192 57 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01882 NR:ns ## KEGG: ACICU_01882 # Name: not_defined # Def: major facilitator superfamily permease # Organism: A.baumannii_ACICU # Pathway: not_defined # 2 54 263 315 458 82 83.0 4e-15 IGMGFSGRLLFFFLPSVLESFRNTFGMQISLIQNGLLTAIPYAFAAVGMVLWSQLAS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:29:41 2011 Seq name: gi|333032494|gb|GL891932.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld388, whole genome shotgun sequence Length of sequence - 624 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 37 - 96 9.4 1 1 Tu 1 . + CDS 155 - 442 149 ## ABAYE2391 hypothetical protein Predicted protein(s) >gi|333032494|gb|GL891932.1| GENE 1 155 - 442 149 95 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2391 NR:ns ## KEGG: ABAYE2391 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 95 1 95 95 190 100.0 1e-47 MDDWQCKYCNGYIMVNHSRIEVGEKVYFLVYKFDAKNERKKLYKKGTVIARCDSILHIES RKKTYKIEEAKVYPLGAPMPFVYNMFWICGCESRP Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:29:44 2011 Seq name: gi|333032493|gb|GL891933.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld397, whole genome shotgun sequence Length of sequence - 919 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 910 885 ## ABAYE2705 hypothetical protein Predicted protein(s) >gi|333032493|gb|GL891933.1| GENE 1 2 - 910 885 302 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2705 NR:ns ## KEGG: ABAYE2705 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 302 4 305 305 569 95.0 1e-161 GAKIRLYACEEAVLGTTPANPIWYTVRRVSDGLSENVSTEESSEVVDSRFRQGGVVTEAE VAGQLEFELSLGTFDLFLSALAFNNWATNSLTIGGAVRKSLTLVKVFEDIGQVFIYRGVQ VNSGEITIQTTGKITGNFGLVGSSFTRQQVNPVVNPIAASTRPLVSMPNVENLLVNGQSI QGKACLQSLTISINNNLEAIRCIGSGKYTPEFYLEKMMDIEANASFMFSATAAGWIDAIK TRDVFTLTFDIRDSKGSKYSFNFPQLEVMEANHPDGGGDDIITVDINFAQVRTAPTIVRA LV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:29:49 2011 Seq name: gi|333032492|gb|GL891934.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld398, whole genome shotgun sequence Length of sequence - 1514 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 439 307 ## AB57_2686 hypothetical protein + Prom 684 - 743 8.0 2 2 Op 1 9/0.000 + CDS 789 - 947 89 ## COG1724 Predicted periplasmic or secreted lipoprotein 3 2 Op 2 . + CDS 1016 - 1444 543 ## COG1598 Uncharacterized conserved protein + Term 1459 - 1485 -1.0 Predicted protein(s) >gi|333032492|gb|GL891934.1| GENE 1 2 - 439 307 145 aa, chain + ## HITS:1 COG:no KEGG:AB57_2686 NR:ns ## KEGG: AB57_2686 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 145 27 171 171 241 97.0 7e-63 QAEFKVRGIAYKPFQVAIERAGNQISSKGYDVMVKDENAKLYHELLMDACAAHLIEDWKG VVFAEIVDGKTVESEKPYTPENASKLLNLGDIGISIWLFIKEQAQRIQEEADKDKALILG KSSSSTNTKKRMRRKRRMKSNKSSS >gi|333032492|gb|GL891934.1| GENE 2 789 - 947 89 52 aa, chain + ## HITS:1 COG:CC3184 KEGG:ns NR:ns ## COG: CC3184 COG1724 # Protein_GI_number: 16127414 # Func_class: N Cell motility # Function: Predicted periplasmic or secreted lipoprotein # Organism: Caulobacter vibrioides # 2 51 10 59 62 70 66.0 7e-13 MIEADGWYEVRVSGSHHHFKHPTKKGLVTIPHPKKDLPNGTVKSILKQAGLN >gi|333032492|gb|GL891934.1| GENE 3 1016 - 1444 543 142 aa, chain + ## HITS:1 COG:YPO1817 KEGG:ns NR:ns ## COG: YPO1817 COG1598 # Protein_GI_number: 16122069 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 10 141 3 136 139 78 37.0 4e-15 MPRAWSVEMLYPIAIERGSDTEAFGVTVPDIPGCFSAGDTLEEAIENVKEAISGHLEILA EDGEEIPLASELVKFVDDPEYKGMIWAVTEVDVSRYLGKPEKINVTLPSRLIRKIDENVG KGKRYTTRSAFLAAGAEKLLHA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:29:54 2011 Seq name: gi|333032491|gb|GL891935.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld413, whole genome shotgun sequence Length of sequence - 2525 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 11 - 661 363 ## ABSDF1808 putative bacteriophage protein 2 1 Op 2 . + CDS 610 - 966 235 ## AB57_2674 hypothetical protein + Term 1060 - 1127 31.1 + Prom 1037 - 1096 80.4 3 2 Op 1 . + CDS 1154 - 2326 883 ## ACICU_01066 hypothetical protein + Term 2343 - 2375 2.3 4 2 Op 2 . + CDS 2394 - 2523 110 ## ABBFA_002318 hypothetical protein Predicted protein(s) >gi|333032491|gb|GL891935.1| GENE 1 11 - 661 363 216 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1808 NR:ns ## KEGG: ABSDF1808 # Name: not_defined # Def: putative bacteriophage protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 196 415 610 1148 402 98.0 1e-111 MKGSAKSRQTVGATLDMVTFQGRCSVRARRLTPTPTVTTVVDEVKWQALYGAYPLQSTVY EHETVFRARTYATTGALSVKSRKINFDLQRMLPTYKNGAMTTELYPTSSFADALVSMALD DKIGRRSIDEIDLENIYRTYNDVVDYFGTPLAAEFCTTIDDTNLSFEELVTNLCDAVFCT AYRQNNKLKLYFERPTPPPQCCLTSGISFRIVTSMT >gi|333032491|gb|GL891935.1| GENE 2 610 - 966 235 118 aa, chain + ## HITS:1 COG:no KEGG:AB57_2674 NR:ns ## KEGG: AB57_2674 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 115 615 729 1148 248 99.0 7e-65 MLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVG VRNKWQAHFNAYRIWNKMRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGLAS >gi|333032491|gb|GL891935.1| GENE 3 1154 - 2326 883 390 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01066 NR:ns ## KEGG: ACICU_01066 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 390 752 1141 1141 783 100.0 0 MADGTVDLIPVTPGSAKNKVVLGRLPNGALKLSPDDFVNTIYTVVNDDTKGSLPYLVAKR EPVDQFSNTITAINYDERYYLNDKDFIDVPVDDSPIYIRYDQLDINLARLYQMQRGDLPT TGEISFVVESGALVSSSSSYRPETRFVYKFDYNSSPPKQEFIAPAATELPAIDTGEFPPD LVVNLTIKGAVVGRGGDGGLPHLAFGAWESDPDYNFTKTRRDGFQGAPGLLNRHSKLNLI IDGGTLARGGSGGGATPSGIYTGLSYGVQGIPGGAGAPFGRVMTGQPISSDSQDWRWYFG SYFNVLKITDAEASVPGKGYRTQNDRYGSPLSGDGGNWGERGTKSTNDGTWNWKYHGTTE GQPGPGGPAIVGVAPLTTQLINGGKILQTL >gi|333032491|gb|GL891935.1| GENE 4 2394 - 2523 110 43 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002318 NR:ns ## KEGG: ABBFA_002318 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 43 1 43 129 79 100.0 3e-14 MEPVSTSGFTALLKLYGIAIMVTLAVGLVAAVVLMTRMPRSPQ Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:30:48 2011 Seq name: gi|333032490|gb|GL891936.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld426, whole genome shotgun sequence Length of sequence - 136614 bp Number of predicted genes - 125, with homology - 125 Number of transcription units - 62, operones - 25 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 406 220 ## gi|332852871|ref|ZP_08434453.1| conserved domain protein 2 1 Op 2 . + CDS 399 - 1169 494 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 3 1 Op 3 . + CDS 1188 - 2768 1098 ## Selsp_0048 hypothetical protein 4 1 Op 4 . + CDS 2761 - 3966 672 ## gi|332875524|ref|ZP_08443337.1| polysaccharide biosynthesis protein + Term 4200 - 4240 -0.1 + Prom 4206 - 4265 7.5 5 2 Op 1 . + CDS 4392 - 5060 348 ## gi|332875525|ref|ZP_08443338.1| conserved domain protein 6 2 Op 2 . + CDS 5108 - 6235 752 ## Sbal223_1479 group 1 glycosyl transferase 7 2 Op 3 3/0.120 + CDS 6228 - 7262 1222 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 8 2 Op 4 3/0.120 + CDS 7265 - 8374 1152 ## COG0451 Nucleoside-diphosphate-sugar epimerases 9 2 Op 5 3/0.120 + CDS 8405 - 9517 1476 ## COG0381 UDP-N-acetylglucosamine 2-epimerase 10 2 Op 6 8/0.040 + CDS 9529 - 10722 737 ## COG0438 Glycosyltransferase 11 2 Op 7 1/0.240 + CDS 10724 - 11680 724 ## COG0451 Nucleoside-diphosphate-sugar epimerases 12 2 Op 8 . + CDS 11684 - 12700 759 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 13 2 Op 9 . + CDS 12693 - 13226 430 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 13290 - 13349 6.0 14 3 Op 1 2/0.120 + CDS 13437 - 15311 1840 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 15 3 Op 2 4/0.080 + CDS 15323 - 16198 961 ## COG1210 UDP-glucose pyrophosphorylase + Term 16260 - 16296 5.1 + Prom 16211 - 16270 3.6 16 4 Op 1 . + CDS 16314 - 17576 1404 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 17 4 Op 2 . + CDS 17573 - 19243 1540 ## COG0166 Glucose-6-phosphate isomerase 18 4 Op 3 . + CDS 19236 - 20252 1297 ## COG1087 UDP-glucose 4-epimerase + Term 20258 - 20302 10.2 - Term 20253 - 20281 -1.0 19 5 Tu 1 . - CDS 20296 - 21666 1616 ## COG1109 Phosphomannomutase - Prom 21696 - 21755 4.0 + Prom 21697 - 21756 5.4 20 6 Op 1 . + CDS 21821 - 21964 74 ## gi|332853803|ref|ZP_08434986.1| hypothetical protein HMPREF0021_02569 + Prom 21969 - 22028 1.7 21 6 Op 2 4/0.080 + CDS 22048 - 23709 1569 ## COG1620 L-lactate permease 22 6 Op 3 5/0.080 + CDS 23729 - 24481 788 ## COG2186 Transcriptional regulators 23 6 Op 4 2/0.120 + CDS 24478 - 25629 1440 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases + Term 25845 - 25888 0.1 24 7 Tu 1 . + CDS 25932 - 27662 1820 ## COG0277 FAD/FMN-containing dehydrogenases + Term 27671 - 27719 10.8 - Term 27661 - 27702 9.9 25 8 Tu 1 . - CDS 27711 - 28925 1332 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Prom 29136 - 29195 5.8 26 9 Op 1 2/0.120 + CDS 29441 - 30151 587 ## COG1802 Transcriptional regulators 27 9 Op 2 9/0.040 + CDS 30144 - 31028 1207 ## COG2513 PEP phosphonomutase and related enzymes 28 9 Op 3 3/0.120 + CDS 31095 - 32252 1233 ## COG0372 Citrate synthase 29 9 Op 4 . + CDS 32252 - 34858 3178 ## COG1048 Aconitase A + Term 34897 - 34927 0.3 + Prom 34879 - 34938 7.8 30 10 Tu 1 . + CDS 34968 - 37436 1319 ## A1S_0077 hypothetical protein + Term 37455 - 37485 4.3 + Prom 37675 - 37734 9.0 31 11 Tu 1 . + CDS 37764 - 37898 93 ## ABSDF0095 hypothetical protein + Term 37925 - 37976 15.3 + Prom 37915 - 37974 7.6 32 12 Tu 1 . + CDS 38022 - 38597 715 ## ABAYE3788 hypothetical protein + Term 38636 - 38666 4.3 + Prom 38908 - 38967 5.1 33 13 Tu 1 . + CDS 39003 - 39512 194 ## PROTEIN SUPPORTED gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 + Term 39553 - 39585 3.0 34 14 Op 1 23/0.000 + CDS 40563 - 41072 408 ## COG2963 Transposase and inactivated derivatives + Prom 41262 - 41321 4.6 35 14 Op 2 1/0.240 + CDS 41342 - 41947 328 ## COG2801 Transposase and inactivated derivatives + Prom 42122 - 42181 10.5 36 15 Tu 1 . + CDS 42299 - 43525 939 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Term 43667 - 43706 1.0 37 16 Tu 1 . - CDS 43535 - 44227 774 ## COG0790 FOG: TPR repeat, SEL1 subfamily - Prom 44410 - 44469 10.9 + Prom 44197 - 44256 12.7 38 17 Op 1 . + CDS 44488 - 47250 2726 ## COG3501 Uncharacterized protein conserved in bacteria 39 17 Op 2 . + CDS 47252 - 48082 610 ## A1S_0086 hypothetical protein 40 17 Op 3 . + CDS 48079 - 48567 202 ## AOLE_18930 hypothetical protein 41 17 Op 4 . + CDS 48576 - 48986 193 ## AOLE_18925 hypothetical protein 42 17 Op 5 . + CDS 48988 - 49362 209 ## AOLE_18945 hypothetical protein 43 17 Op 6 . + CDS 49408 - 49884 344 ## gi|325124075|gb|ADY83598.1| hypothetical protein BDGL_003012 - Term 49908 - 49959 1.4 44 18 Tu 1 . - CDS 49973 - 50674 698 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - Prom 50710 - 50769 5.6 + Prom 51355 - 51414 8.3 45 19 Tu 1 . + CDS 51475 - 52176 707 ## COG4420 Predicted membrane protein + Prom 52202 - 52261 4.5 46 20 Tu 1 . + CDS 52287 - 52952 420 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Prom 52967 - 53026 4.2 47 21 Op 1 . + CDS 53063 - 53437 405 ## ABBFA_003427 hypothetical protein 48 21 Op 2 . + CDS 53466 - 53846 498 ## A1S_0091 hypothetical protein + Term 53848 - 53887 7.7 - Term 53841 - 53870 2.1 49 22 Tu 1 . - CDS 53891 - 55990 1688 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 56025 - 56084 6.3 + Prom 55987 - 56046 5.2 50 23 Tu 1 . + CDS 56066 - 57211 859 ## COG3503 Predicted membrane protein 51 24 Tu 1 . - CDS 57252 - 57719 520 ## COG1522 Transcriptional regulators - Prom 57766 - 57825 6.4 + Prom 57692 - 57751 4.2 52 25 Op 1 7/0.040 + CDS 57838 - 59121 1392 ## COG0665 Glycine/D-amino acid oxidases (deaminating) 53 25 Op 2 1/0.240 + CDS 59142 - 60245 1264 ## COG0787 Alanine racemase 54 25 Op 3 . + CDS 60256 - 60615 477 ## COG0251 Putative translation initiation inhibitor, yjgF family 55 26 Op 1 3/0.120 + CDS 60777 - 60989 200 ## COG1113 Gamma-aminobutyrate permease and related permeases 56 26 Op 2 3/0.120 + CDS 60986 - 62254 1264 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 62268 - 62300 2.0 57 27 Tu 1 . + CDS 62625 - 64055 1600 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 64077 - 64114 5.7 - Term 64069 - 64098 1.4 58 28 Tu 1 . - CDS 64113 - 64994 752 ## COG0583 Transcriptional regulator - Prom 65089 - 65148 5.9 + Prom 65063 - 65122 3.4 59 29 Op 1 2/0.120 + CDS 65142 - 66677 1818 ## COG1012 NAD-dependent aldehyde dehydrogenases 60 29 Op 2 1/0.240 + CDS 66689 - 67579 771 ## COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 61 29 Op 3 4/0.080 + CDS 67661 - 69310 1749 ## COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 62 29 Op 4 10/0.000 + CDS 69322 - 70449 1463 ## COG1960 Acyl-CoA dehydrogenases 63 29 Op 5 12/0.000 + CDS 70471 - 71244 1007 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 64 29 Op 6 . + CDS 71257 - 72282 981 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Prom 72293 - 72352 4.6 65 30 Tu 1 . + CDS 72402 - 73754 1223 ## COG0477 Permeases of the major facilitator superfamily - Term 73791 - 73837 11.1 66 31 Op 1 . - CDS 73847 - 74398 368 ## COG3916 N-acyl-L-homoserine lactone synthetase 67 31 Op 2 . - CDS 74477 - 74893 380 ## ABAYE3760 hypothetical protein + Prom 75430 - 75489 3.9 68 32 Tu 1 . + CDS 75654 - 76370 370 ## COG2771 DNA-binding HTH domain-containing proteins + Prom 76835 - 76894 10.6 69 33 Op 1 11/0.000 + CDS 76991 - 78880 1249 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 70 33 Op 2 1/0.240 + CDS 78913 - 80706 1150 ## COG1960 Acyl-CoA dehydrogenases 71 33 Op 3 7/0.040 + CDS 80703 - 80963 362 ## COG3321 Polyketide synthase modules and related proteins 72 33 Op 4 . + CDS 80960 - 84919 3043 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 73 33 Op 5 . + CDS 84944 - 88594 2659 ## COG1033 Predicted exporters of the RND superfamily 74 33 Op 6 . + CDS 88591 - 89865 893 ## ACICU_00144 hypothetical protein 75 33 Op 7 . + CDS 89919 - 91784 1249 ## ACICU_00145 putative NAD dependent epimerase/dehydratase family protein + Term 91844 - 91915 15.3 + Prom 91844 - 91903 2.7 76 34 Tu 1 . + CDS 91945 - 92541 267 ## COG2091 Phosphopantetheinyl transferase + Term 92603 - 92639 2.1 - TRNA 92636 - 92711 90.4 # Gly GCC 0 0 - TRNA 92758 - 92833 90.4 # Gly GCC 0 0 + Prom 92855 - 92914 8.1 77 35 Op 1 . + CDS 93064 - 93372 413 ## COG0271 Stress-induced morphogen (activity unknown) 78 35 Op 2 . + CDS 93384 - 93776 425 ## ABSDF0135 hypothetical protein 79 35 Op 3 . + CDS 93853 - 94695 839 ## COG1192 ATPases involved in chromosome partitioning 80 35 Op 4 . + CDS 94706 - 95092 400 ## AOLE_18715 hypothetical protein + Term 95096 - 95167 4.1 + Prom 95115 - 95174 6.0 81 36 Tu 1 . + CDS 95308 - 95898 488 ## COG1280 Putative threonine efflux protein - Term 95809 - 95850 4.1 82 37 Tu 1 . - CDS 95906 - 96547 535 ## COG0586 Uncharacterized membrane-associated protein - Prom 96613 - 96672 3.5 83 38 Tu 1 . + CDS 96741 - 97178 494 ## COG2259 Predicted membrane protein + Term 97192 - 97240 5.8 - Term 97176 - 97226 7.1 84 39 Tu 1 . - CDS 97237 - 98466 1490 ## COG4399 Uncharacterized protein conserved in bacteria - Prom 98699 - 98758 13.3 + Prom 98684 - 98743 10.8 85 40 Op 1 . + CDS 98842 - 100410 1958 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 100417 - 100457 9.2 86 40 Op 2 . + CDS 100476 - 101264 756 ## COG1708 Predicted nucleotidyltransferases + Term 101320 - 101347 0.1 + Prom 101364 - 101423 11.2 87 41 Op 1 . + CDS 101483 - 102010 534 ## COG1695 Predicted transcriptional regulators 88 41 Op 2 . + CDS 102071 - 102376 362 ## AB57_0173 hypothetical protein + Prom 102433 - 102492 4.0 89 42 Op 1 1/0.240 + CDS 102533 - 103480 1111 ## COG1741 Pirin-related protein 90 42 Op 2 . + CDS 103477 - 103884 421 ## COG1765 Predicted redox protein, regulator of disulfide bond formation + Term 103940 - 103969 1.4 + Prom 103913 - 103972 3.1 91 43 Tu 1 . + CDS 103997 - 104665 480 ## COG0625 Glutathione S-transferase + Term 104668 - 104707 6.3 92 44 Tu 1 . - CDS 104709 - 105335 762 ## COG3087 Cell division protein - Prom 105366 - 105425 4.0 - Term 105440 - 105479 2.8 93 45 Tu 1 . - CDS 105489 - 107279 1954 ## COG0018 Arginyl-tRNA synthetase - Prom 107423 - 107482 7.1 + Prom 107481 - 107540 8.2 94 46 Tu 1 . + CDS 107775 - 109472 1770 ## COG0281 Malic enzyme + Term 109483 - 109525 8.1 - Term 109478 - 109507 2.1 95 47 Tu 1 . - CDS 109518 - 110438 1211 ## COG2837 Predicted iron-dependent peroxidase - Prom 110503 - 110562 5.7 + Prom 110509 - 110568 5.9 96 48 Tu 1 . + CDS 110597 - 111223 651 ## COG1280 Putative threonine efflux protein 97 49 Op 1 42/0.000 - CDS 111225 - 112034 849 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 98 49 Op 2 1/0.240 - CDS 112038 - 112817 208 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 99 49 Op 3 . - CDS 112799 - 113296 424 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 113376 - 113435 5.0 + Prom 113333 - 113392 4.5 100 50 Tu 1 . + CDS 113460 - 114263 725 ## COG4531 ABC-type Zn2+ transport system, periplasmic component/surface adhesin + Prom 114317 - 114376 5.3 101 51 Tu 1 8/0.040 + CDS 114433 - 114831 294 ## COG3312 F0F1-type ATP synthase, subunit I + Term 114860 - 114912 1.2 102 52 Op 1 40/0.000 + CDS 114936 - 115811 790 ## COG0356 F0F1-type ATP synthase, subunit a + Term 115819 - 115858 5.0 + Prom 115815 - 115874 3.6 103 52 Op 2 37/0.000 + CDS 115896 - 116141 403 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 104 52 Op 3 38/0.000 + CDS 116180 - 116650 663 ## COG0711 F0F1-type ATP synthase, subunit b 105 52 Op 4 41/0.000 + CDS 116663 - 117199 615 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 106 52 Op 5 42/0.000 + CDS 117246 - 118790 1816 ## COG0056 F0F1-type ATP synthase, alpha subunit 107 52 Op 6 42/0.000 + CDS 118868 - 119737 1018 ## COG0224 F0F1-type ATP synthase, gamma subunit 108 52 Op 7 42/0.000 + CDS 119768 - 121162 1853 ## COG0055 F0F1-type ATP synthase, beta subunit 109 52 Op 8 . + CDS 121180 - 121599 637 ## COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) + Term 121616 - 121653 6.4 + Prom 121637 - 121696 5.2 110 53 Tu 1 . + CDS 121748 - 122230 444 ## ACICU_00180 hypothetical protein + Term 122240 - 122268 1.0 - Term 122220 - 122263 11.2 111 54 Op 1 . - CDS 122279 - 122878 630 ## ABAYE3714 hypothetical protein - Prom 122936 - 122995 5.8 112 54 Op 2 . - CDS 123024 - 123569 789 ## COG0386 Glutathione peroxidase - Prom 123607 - 123666 6.0 113 55 Op 1 1/0.240 - CDS 123692 - 124456 562 ## COG2207 AraC-type DNA-binding domain-containing proteins 114 55 Op 2 . - CDS 124478 - 125692 1341 ## COG2814 Arabinose efflux permease - Prom 125756 - 125815 8.6 + Prom 125751 - 125810 9.6 115 56 Op 1 . + CDS 125838 - 126479 632 ## COG1309 Transcriptional regulator + Prom 126503 - 126562 3.9 116 56 Op 2 . + CDS 126585 - 127505 678 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 127523 - 127570 6.4 117 57 Op 1 1/0.240 - CDS 127897 - 128466 545 ## COG0009 Putative translation factor (SUA5) 118 57 Op 2 4/0.080 - CDS 128517 - 129647 868 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 119 57 Op 3 . - CDS 129668 - 130822 1258 ## COG1652 Uncharacterized protein containing LysM domain - Prom 130886 - 130945 2.1 + Prom 130812 - 130871 7.1 120 58 Tu 1 . + CDS 130945 - 131475 690 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 131531 - 131566 1.2 - Term 131422 - 131449 0.1 121 59 Tu 1 . - CDS 131648 - 131938 202 ## gi|239503031|ref|ZP_04662341.1| hypothetical protein AbauAB_12034 - Prom 131976 - 132035 5.3 + Prom 131932 - 131991 5.8 122 60 Op 1 . + CDS 132013 - 134127 2246 ## COG1629 Outer membrane receptor proteins, mostly Fe transport 123 60 Op 2 . + CDS 134181 - 134387 193 ## ABBFA_003351 hypothetical protein + Term 134399 - 134453 9.0 - Term 134279 - 134314 -0.8 124 61 Tu 1 . - CDS 134457 - 135671 1186 ## ABAYE3701 hypothetical protein - Prom 135696 - 135755 6.9 + Prom 135662 - 135721 6.0 125 62 Tu 1 . + CDS 135759 - 136355 365 ## COG1309 Transcriptional regulator + Term 136366 - 136417 -0.7 Predicted protein(s) >gi|333032490|gb|GL891936.1| GENE 1 2 - 406 220 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332852871|ref|ZP_08434453.1| ## NR: gi|332852871|ref|ZP_08434453.1| conserved domain protein [Acinetobacter baumannii 6013150] conserved domain protein [Acinetobacter baumannii 6013113] conserved domain protein [Acinetobacter baumannii 6013150] conserved domain protein [Acinetobacter baumannii 6013113] # 1 134 172 305 305 250 100.0 2e-65 IRAAVINDWEKYGIHMLDATLGILDIDIIDINCIKHNSYDSYFLYCSDNLTVQIDTLGSN ILAFSYEIFGTKKCEKFEIRDNFTSFKRMLGCFIDQIKTKEPAISWDNMSKSISTLITGV NARNTASRIKVIYE >gi|333032490|gb|GL891936.1| GENE 2 399 - 1169 494 256 aa, chain + ## HITS:1 COG:Cj1332 KEGG:ns NR:ns ## COG: Cj1332 COG1028 # Protein_GI_number: 15792655 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Campylobacter jejuni # 5 256 2 256 256 159 35.0 4e-39 MNNFLNNKKILIVGAGGLLGIHLVASMLKQGAKVIAADLCVDLMRERLNTLGVDLNNENL SIIYLDVTSESSVKSFFSTDLKIDGAVNTTYPRNKTYGSHFFDVTLESFNENLSLHLGSM FLFTQQCAKYFTQYQTPFSLVNISSIYGVVAPKFDIYNNTKMTMPVEYAAIKSATLHLNK YIVAYVNDSRFRINCVSPGGIFDHQPEPFLEAYKSHTHGAGMLDVKEILGSVLFLLSEQS RYVTGQNIIVDDGFSL >gi|333032490|gb|GL891936.1| GENE 3 1188 - 2768 1098 526 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0048 NR:ns ## KEGG: Selsp_0048 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 21 522 25 522 536 210 29.0 1e-52 MINILKTIVNYVKPYKSNQIENEFTELNYQYWKKEDSSITENSYCLIEGQITCPASIMDK ARIGKAVQEVTGAKPVVFLRGFYEESNDVAHIYKSFNINDFYMWWKGYLNPLVFIPALFA TLKTVVLYKDGSKLANLTHKGVEIGELIYDTLIRFKPNTYTINQIKFTHYRLIFRAFLTF YNNEYLIRKYKPKYLVTSHNVYAEFGMLPRQLKKVSNTNVIFLKDIYAYKCYNSSVNIKE HFLKPSIELFNQKLSSPEYLEEAKAYVENRFNGNIDQIDVKNAFLNKKTYNLDELKEIFP KVDKNKKNIVVMSHAFSDAPHVGEGLLFKDYYDFLVKTLIHLNKNKEVNVFVKAHPSSYM WNEKGAVEELLENYQLGNIYILPNNLNTNSIVNFADYIVTAKGTAGLEFSCLGIPAVTAG KGYYYGFGIAKEPDTVEEYYSMLDNITKIDRLNSETINRALVLLYMVAQSRRHSKILPRS HIMPGEIYSEVYLDKYKEIIENFKNGEAMKDSFYEEIKNDVVNSNV >gi|333032490|gb|GL891936.1| GENE 4 2761 - 3966 672 401 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875524|ref|ZP_08443337.1| ## NR: gi|332875524|ref|ZP_08443337.1| polysaccharide biosynthesis protein [Acinetobacter baumannii 6014059] polysaccharide biosynthesis protein [Acinetobacter baumannii 6014059] # 1 401 1 401 401 617 100.0 1e-175 MFKKGLIYIVLNYTIQFLNIIFNLLLMKYLSSYQLGSLALAKTWQQFVDYSHLGARFSLD RYIPTAEEEEKKYLVATVLFTTFIGSLFILLAAVILNDADIIVSVLTASGIFIAVGNIIK AYYRATNSLTKMLNLVFYNQLLPLLISIVLYFYTLDFNIYLVSLILSYLFFSLILFYQER ELFNFIQYKRIKKVIKEIALPSFLLFINSLMIFLYLVMDRFFIDYSNGREELGHYSIILF AFTALMIIPATVAELLFVKIIKQSCEAGKRFFWRETFITLGITIVGVIAANFCMDYFVKK FTNYGFLTEQMHIATLAVIPFALTAIYYHVMNGLDLRREIVLVNLSVCIILALYYIYPLF FNQSYGLDYYLYAKVATGWLVFLGYLFFILFSKDTVLKETA >gi|333032490|gb|GL891936.1| GENE 5 4392 - 5060 348 222 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332875525|ref|ZP_08443338.1| ## NR: gi|332875525|ref|ZP_08443338.1| conserved domain protein [Acinetobacter baumannii 6014059] conserved domain protein [Acinetobacter baumannii 6014059] # 1 222 121 342 342 271 100.0 2e-71 MLSLFFSSYVYFVLNVKFDFHIKGLILLLLILTILTGWKSTLLNYIFIFSSFFVLYKKNK LSILLKAFFAFLVIFFGINAIRSGVYSVSFEEFFSYFFYGFENFVRIAPVYTSECLHSVP LLNSECQFTYDNDSLVNPTFNVYTALMPIYADGGSILVGFMFFVFAFILGLIKDYKNSFF ITFLFYLAHYFFMMAHNGYVFNSGSFAILLVLLFIFDFIRIR >gi|333032490|gb|GL891936.1| GENE 6 5108 - 6235 752 375 aa, chain + ## HITS:1 COG:no KEGG:Sbal223_1479 NR:ns ## KEGG: Sbal223_1479 # Name: not_defined # Def: group 1 glycosyl transferase # Organism: S.baltica_OS223 # Pathway: not_defined # 2 359 4 364 372 294 50.0 6e-78 MKVLINAANLHSGGGVQVASSFINELPFVSNNIIKYFDIIVSSEVDKNISQTTKSFFKNY KVHNIFGLKNYKHNMGLFDNYDLVFTIFGPCYHSIKGINLVGFAQPWIIYPNNECYNMLS SVEKLKFKLKFFLQKNFFKKSDYCVVELEHVKQRLTKLNIFKDNQVDVVYNTVSNIYFSP EKWEKIKFESSEKIKIGLISRDYFHKNTNILPKVKETLKNKYKKEVDFYVTFNEEEWLNK SSYFQENIINVGPLKVNECPNFYEKMDAIIFPSLLECFSATPLEAMIMKKPLFASDRGFI KDVCLDFAFYFEPTDPESAAAVINGFIENKNINELDIKLTAAQTHAKNFSSARQRAVKYT QIIENCLNKEENSHV >gi|333032490|gb|GL891936.1| GENE 7 6228 - 7262 1222 344 aa, chain + ## HITS:1 COG:PM1007 KEGG:ns NR:ns ## COG: PM1007 COG1086 # Protein_GI_number: 15602872 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Pasteurella multocida # 1 343 1 343 344 561 79.0 1e-160 MFKDKILLITGGTGSFGNAVLKRFLETDIKEIRIFSRDEKKQDDMRKKYHSSKLKFYIGD VRDYNSVLNATRGVDYIYHAAALKQVPSCEFHPMEAVKTNVIGTENVLEAAIQNRVKRVV CLSTDKAVYPINAMGISKAMMEKVIVAKSRNLENLDIVISCTRYGNVMASRGSVIPLFVD QMRKGKPLTITDPNMTRFMMTLEDAVDLVLYAFEHGENGDIFVQKAPAATIEVLAQALKE LLNQKDYPITIMGTRHGEKAYEALLSREEMAVAIDQGDYFRVPADQRDLNYEKYVENGDL KITEFDDYNSHNTERLDVEGMKKLLLKLEFVRALTKGQYVDPEA >gi|333032490|gb|GL891936.1| GENE 8 7265 - 8374 1152 369 aa, chain + ## HITS:1 COG:PM1008_1 KEGG:ns NR:ns ## COG: PM1008_1 COG0451 # Protein_GI_number: 15602873 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Pasteurella multocida # 1 251 1 255 255 302 58.0 8e-82 MKILITGSNGFIAKNLIQFLSEKPEVEILKAHRATTDQEFEQVVLAADWIVHLAGVNRPL NEEEFAEGNTTLTEKIAQILQQANKKTPVILSSSIQVERDNPYGKSKLGGEQALVALNQA QGNPVYICRLANVFGKWSRPNYNSAVATFCYNVANDLPLQIHDENAVIRLVYVDDVVETF WNIINGQQVEQIFQVEPEYQITVGDLAKVLNGFKASRDTLITDRVGTGLTRALYSTYLSF FKPEQFDYSVPKYGDARGVFVEMLKTPDAGQFSYFTAHPGITRGGHYHHTKTEKFLVIKG KALFKFKHVVTGEFYELETQGNEPRIVETVPGWTHDITNIGDDEMIVMLWANEIFDRNKP DTYTMPITN >gi|333032490|gb|GL891936.1| GENE 9 8405 - 9517 1476 370 aa, chain + ## HITS:1 COG:PM1009 KEGG:ns NR:ns ## COG: PM1009 COG0381 # Protein_GI_number: 15602874 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine 2-epimerase # Organism: Pasteurella multocida # 1 370 7 376 376 623 81.0 1e-178 MTVVGTRPEIIRLSRVMAACDEYFDHVIVHTGQNYDYELNEIFFTDLGIRKPDHFLNAAG ATGAETIGNVIIAVDKILDEVKPEALLVLGDTNSCMAVLPAKRRKIPTFHMEAGNRCFDM RVPEEINRRIVDHTADINLTYSTIARDYLLAEGLPADLVIKSGSPMFEVLHHYKAKIEAS DVLERLNLKEHEYFIVSAHREENINSDQNFLDLVEMLNAVAEKYKYPVIVSTHPRTRKRI EELNVEFHPLIQLLKPLGFSDYNKLQLSAKAALSDSGTINEESSILNFPALNLRQAHERP EGMEEAAVMMVGLKAERILQGLAILEGQTRGEDRLLRLVEDYSMPNVSEKVVRIIMSYTD YVNRVIWKQF >gi|333032490|gb|GL891936.1| GENE 10 9529 - 10722 737 397 aa, chain + ## HITS:1 COG:alr2867 KEGG:ns NR:ns ## COG: alr2867 COG0438 # Protein_GI_number: 17230359 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Nostoc sp. PCC 7120 # 1 395 1 393 405 126 24.0 7e-29 MKKVLVVSEFIDPDQNSTGYFWYKIIQKLAQSDGVEQLSVIAPYSGDRGEIQKKFCSNIG FLLFLHASYDKNNLFKRLLGQLQQTFGFFKILLKNLVKDKVVVSGTNPLFLLVLLAFLRV FIPFKWYLLVHDVFPENLVPAGILKKDSVLFKIMNFIFNRIYSRADHLIVIGRDMKNLMR QKTGSDNITVIPNWVDFTEIDVRQKQQSSIISSLGWNENIVFQFFGNMGRVQGISNLLAA INLINNPSAKFLFIGGGNDAQLVKEFAEDEANKNKVAYIGELAAQRRSLGLSSCDIAIVT LAEGMLGLGVPSKAYFTMAADRPILAIMEEDAEVANMVKEHSIGWVCEPNDPVRLASLID EICRTKLNKLSNSPRQILQDYYHQDKLLQSFADIVES >gi|333032490|gb|GL891936.1| GENE 11 10724 - 11680 724 318 aa, chain + ## HITS:1 COG:PA3146 KEGG:ns NR:ns ## COG: PA3146 COG0451 # Protein_GI_number: 15598342 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Pseudomonas aeruginosa # 5 316 1 310 316 275 46.0 6e-74 MKNILVTGSSGFVGKSLIRSLIMSNKYQKIYALNRRYSHTLPEIVEQLVATSESVFSTPI PNDIDVIIHLAGRAHILNDNVQNPLEQFRAVNVEGTLQLARQALENNVQRFIFISSIGVN GAVTNKKAFDELDPPQPHADYAISKLEAEQALKELFENTNTELVIIRPPLVYAADAPGNF ARLLKLALTNLPLPFASLNNGRSFVALENLVSFIEACIEHPQAKNELFLIADNEVLSTQQ LVISIRKGMGRKANLIYIPKFLMRVGAICVGKSKLYEQLFLSLEIDASKARNLLNWTPPI NAYAALEKTGKIYFERSE >gi|333032490|gb|GL891936.1| GENE 12 11684 - 12700 759 338 aa, chain + ## HITS:1 COG:PA3145 KEGG:ns NR:ns ## COG: PA3145 COG0472 # Protein_GI_number: 15598341 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Pseudomonas aeruginosa # 2 338 1 339 339 298 50.0 1e-80 MLMIWIILASFLISFLLTGYMRHYALKKNIIDNPNERSSHTIPTPRGGGVSIVITFLLVL VGLIVSHQLEATTGSILVAAGLGVAVLGFLDDHGHINSMLRLAIHFVIAISTVFFLGGFS EVTLFNGNLQLGWTANIIAVLFLVWLLNLYNFMDGINGIASVEAITTVLSLGFIYLVLDT PLSSELLFILAACVLGFVLWNFPKARIFMGDAGSGFLGLILGILALISLKIDPALFCAWI ICLGVFIVDATFTLIRRVINGHKMYDAHRSHAYQYASRKYNSHTKVTISVLLINVFWLLP VAYLAAQKVLMPEFLLLIAYIPLILIALFFGAGKTENA >gi|333032490|gb|GL891936.1| GENE 13 12693 - 13226 430 177 aa, chain + ## HITS:1 COG:Cj1123c KEGG:ns NR:ns ## COG: Cj1123c COG0110 # Protein_GI_number: 15792448 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Campylobacter jejuni # 1 173 1 159 195 81 32.0 7e-16 MLKKNVLLILGAGGHGKSVAEAALLSGKWKKIMFADDSWPQRTDIAGFPIVTNINNIPDI ISDISAAIPAVGNNPLRQKWFQLLESLSIPIATVVHPSAIISPNVEIGNGVAIMAGCIVG LDVKVEDGAIINMASSIDHDTHIGEFAHLSVGVKVVGDKKIDSLSFLPAGSVITHLM >gi|333032490|gb|GL891936.1| GENE 14 13437 - 15311 1840 624 aa, chain + ## HITS:1 COG:PM1015 KEGG:ns NR:ns ## COG: PM1015 COG1086 # Protein_GI_number: 15602880 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Pasteurella multocida # 1 581 3 593 648 620 53.0 1e-177 MKKIIYQFASAPRFAKQCFLVLIDLLAVPVILWLCYAIRLFDLGAEVIPGINYGVAFVTI LAILSLMLTGVYRFIVRAFNEAFIAKLAISVTVMVVVLYGMNVFSPAFIPTSIPLMFGFL MFGWVWCSRAFIRFIVKASLQTSEERKRIAIYGAGDAGQQIAAVLYRSGDHLPVFFIDDN TSLQDHMVGGLKVLSLDKALQRFEKFRIDEILLALPSVGRVRKSEIIQQLEPAHLKITEL PGLTQLVDGELKVADIREVDIIDLLGRDPVPPVDHLLAKNIQNKVVMVTGAGGSIGSELC RQIIKNQPKKLIIYEITEFALYSIEKELRLTAQCEIIPILGSVQDQPKLERIIEQYGVQT VYHAAAYKHVPLVECNPIAGLKNNAIGTANSLNAAVKNGVETFVLISTDKAVRPTNVMGA SKRMAELYCQAMAEAQKQTQISIVRFGNVLGSSGSVVPLFKQQIAKGGPITVTHPEVTRY FMTIPEASQLVIQAGALGKGGDVFLLDMGEPVRIQDLARQMISLSGLTVREPGSMQGDIE IQYSGLRPGEKLYEELLIDQENTEFTEHSRILRSFEKFYPLTEIQEVFDRVNNMTAVQSD IDWALCQLEHYVDGYKRSKDVMVN >gi|333032490|gb|GL891936.1| GENE 15 15323 - 16198 961 291 aa, chain + ## HITS:1 COG:HI0812 KEGG:ns NR:ns ## COG: HI0812 COG1210 # Protein_GI_number: 16272753 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose pyrophosphorylase # Organism: Haemophilus influenzae # 4 289 2 291 295 313 56.0 2e-85 MIKKAVLPVAGLGTRFLPASKSIPKEMVTVVDRPAIEYVVREAVEAGIEQIILVTHSSKA SIENYFDRNFELETTLEQKKKIDLLAEITQIVPEHVSIISVRQPQPLGLGHAVLCAKSVV GQDDFAVLLPDVLVKDSSEQNDLSRMISRYNSSQAAQIMVEAVPDHLVDQYGIVDVKHSP NEGESIVMQGIVEKPPVGAAPSNLSVVGRYVLPAKIMQLLENTPKGAGNEIQLTDAIAML QETDIVEAYRMQGQTFDCGSKLGYLKAVLHYGIGHPKLGNDFKELIQELKL >gi|333032490|gb|GL891936.1| GENE 16 16314 - 17576 1404 420 aa, chain + ## HITS:1 COG:YPO2174 KEGG:ns NR:ns ## COG: YPO2174 COG1004 # Protein_GI_number: 16122405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Yersinia pestis # 1 419 1 441 448 251 33.0 2e-66 MKIAVFGTTLHAGVMAALLAEYGNQIYWCTSVTCEENISILSYQDQEVNHYLNKQRKAGF LKESRFSEVPLDIEVYLFCFSPTQIGLALKTVEKLSERPIVHPRLMINGSTFGLHGTDQL KQHLPKDEWVYFPDVIQEGNAINSVLNVKHVIVGVESSYAQDIMQELLRPFFRFSYQYLF MPILDAEFTKLSISGMLATRISYMNDLAMVAEKLGIDIANVKHGIAADTRIGAAYLSAGV GFGGENFSHDILTLSSTVSGTGAKSRLLEQVWAINEQQKEILFRKLWNYYHCDLSGKTVA IWGASFKENTSSTHNSPIHILLAALWAQGVKVRLHDPQALDEIATTYGDREDLVLCADQY EAAQGAHALCLVTAWKQYWSPDFKQLQQVMQHPLILDGRNIYDPAYVKAKGFAYEGVGRL >gi|333032490|gb|GL891936.1| GENE 17 17573 - 19243 1540 556 aa, chain + ## HITS:1 COG:ECs5008 KEGG:ns NR:ns ## COG: ECs5008 COG0166 # Protein_GI_number: 15834262 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Escherichia coli O157:H7 # 31 547 27 541 549 495 48.0 1e-139 MSKSIEKFPKELVSPIAQLHSLVEKNSKLHIKELFAAEQDRFQNYSVKFDQLVFDYSKHR ITKSVLEQLFALAKTKQLTHWIERLFSQDKVNCTEQRAAMHWALRLPSEYSKFPELTKQV HTQLQRMYVLVEKIHAGQYRGATGEVIQDVVNIGVGGSDLGPQMVTHALCDFKVKTAKPL NVHFVSTMDGSQLSDLLHQLRPETTLFIISSKSFGTIDTLSNAQTVRQWLEKALGKHDRV VKSHFIGVSTKAEKMTEWGIAPDNQLLLWDWVGGRYSLWSCIGFPIALTIGIDGFQQLLA GAHAVDEHFQNTSFERNIPVLMALLGIWNNNFLNIQTHAVLPYDGRLKYFAAYLQQLEME SNGKSVQRDGQKVELDTCPIVWGEVGPNAQHAFYQLLHQGTQAVSCDFIAPVQRYNADHF TYVENAEALVEQHHLALSNCLAQSRLLAFGNEALDSAELKNLPIYKQYEGNQPSSTLLLK ELNPYSLGMLIALYEHKVFVQSVIWNINPFDQWGVEKGKQIADQLLPILNGAQNDLSTLD ASTRGLIKILLGKVDG >gi|333032490|gb|GL891936.1| GENE 18 19236 - 20252 1297 338 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 4 337 3 335 339 425 62.0 1e-119 MAKILVTGGAGYIGSHTCVELLEAGHEVIVFDNLSNSSKESLNRVQEITQKSLTFVEGDI RNSGELDRVFQEHAIDAVIHFAGLKAVGESQEKPLIYFDNNIAGSIQLVKSMEKAGVYTL VFSSSATVYDEANTSPLNEEMPTGMPSNNYGYTKLIVEQLLQKLSVADSKWSIALLRYFN PVGAHKSGRIGEDPQGIPNNLMPYVTQVAVGRREKLSIYGNDYDTIDGTGVRDYIHVVDL ANAHLCALNNRLQAQGCRAWNIGTGNGSSVLQVKNTFEQVNGVPVAFEFAPRRAGDVATS FADNARAVAELGWKPQYGLEDMLKDSWNWQKQNPNGYN >gi|333032490|gb|GL891936.1| GENE 19 20296 - 21666 1616 456 aa, chain - ## HITS:1 COG:VC0242 KEGG:ns NR:ns ## COG: VC0242 COG1109 # Protein_GI_number: 15640272 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Vibrio cholerae # 1 455 1 459 463 622 64.0 1e-178 MTTLTCFKAYDIRGKLGTELNEEIAYKIGRAYGQIYKPKTVVVGCDIRLSSEALKQATIR GLNDAGVNVLDLGMTGTEEVYFAAFHLDVQGGIEVTASHNPMDYNGMKLVRENARPISAD TGLKEIQALAETNNFEEVSQKGTTQSYNILPEFVDHLITYIEPAKIRPLKLVVNAGNGAA GHVIDAIEEKFKALNVPVEFIKIHHEADGTFPNGIPNPILIENRDSTRNAVLEHKADMGI AWDGDFDRCFLFDEKGQFIEGYYIVGLLAQAFLIKQSGEKIVHDPRLVWNTFDIVDEYKG VAVQSKSGHAFIKDVMREHNAVYGGEMSAHHYFRDFAYCDSGMIPWLLTIALLSETGQSL STLVENMIAKFPCSGEINFKVADTQTTIQKIFDFYADQNPQIDRTDGVSLDFGAWRFNVR ASNTEPLLRLNIESRADRQAQPMQYYVDELTGLIQN >gi|333032490|gb|GL891936.1| GENE 20 21821 - 21964 74 47 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|332853803|ref|ZP_08434986.1| ## NR: gi|332853803|ref|ZP_08434986.1| hypothetical protein HMPREF0021_02569 [Acinetobacter baumannii 6013150] hypothetical protein HMPREF0020_02309 [Acinetobacter baumannii 6013113] hypothetical protein HMPREF0022_02989 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0021_02569 [Acinetobacter baumannii 6013150] hypothetical protein HMPREF0020_02309 [Acinetobacter baumannii 6013113] hypothetical protein HMPREF0022_02989 [Acinetobacter baumannii 6014059] # 1 47 1 47 47 78 100.0 2e-13 MKISKLEKSLILLSTIGNTNFGDYLIIDLTNNCVYDAHCDLRKNICI >gi|333032490|gb|GL891936.1| GENE 21 22048 - 23709 1569 553 aa, chain + ## HITS:1 COG:STM3692 KEGG:ns NR:ns ## COG: STM3692 COG1620 # Protein_GI_number: 16766977 # Func_class: C Energy production and conversion # Function: L-lactate permease # Organism: Salmonella typhimurium LT2 # 2 553 1 551 551 742 73.0 0 MLNMWQQLYDPLNNIWLSSAVALIPIIFFFLALAVFRLKGSIAGTGTVIIALMIALFFYQ MPGQMAFASIIYGFFYGLWPISWIIIGAVFLYKISVKTGQFEVIRSSILSITEDQRLQML LVGFAFGTFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLCLIVNTAPVAFGAMGIPIIV AGQVSGVDTMEISQMVGRQLPFLTIIVLFWIMAIMDGWRGVKETWPAVLVGGGAFAIAQY LTSNFIGPELPDITAAIASLVSLTLLFRVWKPKHIFRFEPEAGQTLTQQPTTVQRYSIGK IAKAWSPFAILTVMVTIWSVKPFKALFAKDGALEHWIFKLEVPYLHKLVEKMPPIVSEMK PYEAIYKFDWFSATGTAIFIAAIITVIFLKMKASEAVTTFGETLNELKTPIYSIGMVLAF AFIANYSGLSATLALALSHTGHAFTFFSPFLGWLGVFLTGSDTSSNALFSALQATTAQQI GIPEVLLVAANTSGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSIIFTVFVGII ITVQAYLVPWMIP >gi|333032490|gb|GL891936.1| GENE 22 23729 - 24481 788 250 aa, chain + ## HITS:1 COG:STM3693 KEGG:ns NR:ns ## COG: STM3693 COG2186 # Protein_GI_number: 16766978 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Salmonella typhimurium LT2 # 2 244 7 245 258 210 48.0 3e-54 MRISDQVVMKLQALIEERHMKKGDRLPAERQLATSLGVSRPSLREAIQQLNSQGVLISRR GDGTYIQQLPEQWPQQLIVNPISNLIEEDPLYRFDVQEARLVLEGGTAWYAALRSTPEDR AKIHHYFNEISRHQNAGDSAQAAVADAEFHLAIAEASHNVVLIQMMRSLFDLLQYNVLLG RKKVYNDPVNGDLLSEQHFQVMDAIDRKDPEAARQAVCGHIEFVINHVRSLDEDEARQKR ANRLNRVDSK >gi|333032490|gb|GL891936.1| GENE 23 24478 - 25629 1440 383 aa, chain + ## HITS:1 COG:ECs4483 KEGG:ns NR:ns ## COG: ECs4483 COG1304 # Protein_GI_number: 15833737 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Escherichia coli O157:H7 # 1 383 1 383 396 673 86.0 0 MIISSGNDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSL ETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAI NRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMR RYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWI REFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVMSSARALPAIADAVKGD LAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMT LTGAKTISDINTDCLVQAIKQGL >gi|333032490|gb|GL891936.1| GENE 24 25932 - 27662 1820 576 aa, chain + ## HITS:1 COG:NMA1205 KEGG:ns NR:ns ## COG: NMA1205 COG0277 # Protein_GI_number: 15794149 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Neisseria meningitidis Z2491 # 13 573 2 563 563 719 61.0 0 MDDQKETIMQTFSPQAVIEHLQNIVGRSYVLTDDQSTRQYRQGRRFGEGKVLAVVVPGTL LEQWQVLQAAIEADCIVIMQAANTGLTGGSTPYGDDYDRPVLVMSTRRLKGIQVIHDGKQ VICLPGATLDNLEQILKGYNREPHSVIGSSCIGASVLGGVCNNSGGALVRRGPAYTELAL YAQVNAAGQLELVNHLGVNLGSTPEEILTRLEKQQYQAVDILDDNEKQASDHRYAHDVTQ VDEDTPARFNADPSRLFEASGSAGKVCVFAVRLDTYEKVESSVFYIGSNDADDLTAIRRY LLTSLPSLPIAGEYIHRDAYLIGEKYGKDTFLFIEKFGTANVPKAFAMKDKVDGFLEKFK IKGLTDQILQAITFFLPSHLPKRMTEYRDRYEHHLVLRVENNSKAQTEQFLKEYFAVHQS GNYFVCSEEEGRKAFLHRFAIAGAAIRYRDTHRSEVEDIVALDIALRRNDREWVEQLPAE MEKKIIHKLYYGHFFCHVFHQDYILKKGNDPLEMEHQMWKLLDARRAEYPAEHNVGHLYI AKPALANFYQKLDPTNSFNVGIGHTSKLKYWGKAKS >gi|333032490|gb|GL891936.1| GENE 25 27711 - 28925 1332 404 aa, chain - ## HITS:1 COG:tyrB KEGG:ns NR:ns ## COG: tyrB COG1448 # Protein_GI_number: 16131880 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Escherichia coli K12 # 1 397 1 397 397 543 65.0 1e-154 MFQHIPPYAGDPILSLMEQFNADTRSEKVNLSIGLYYNEDSIVPQLETIIEAQKRIEPKN GKTKLYLPMEGFKPYREAIQALLFGANSPAVKAGRAVTIQTLGGSGALKVGADFLKTYFP NSDVWVSQPTWDNHVAIFNGAGIKTHFYPYFDAETRGVDFDGMLSTLKTLPEQSIVLLHP CCHNPTGADLNPAQWDQVIAVLKDRNLIPFLDIAYQGFGDGMEEDAYAIRALDQAGLNFI VSNSFSKIFSLYGERVGGLTFVCDDAEAAQCTFGQLKATVRRIYSSPPTTGAWLVDEVLN DAELNQQWQGEVKEMRERIIKMRSILKDELTKALPDRDFSYLVNQKGMFSYTGLTAEQVD ILREEYAIYLVRSGRICVAGLNMNNVYTVAKAMAEVLAKSVEAA >gi|333032490|gb|GL891936.1| GENE 26 29441 - 30151 587 236 aa, chain + ## HITS:1 COG:PA0797 KEGG:ns NR:ns ## COG: PA0797 COG1802 # Protein_GI_number: 15595994 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 4 226 1 226 240 271 65.0 6e-73 MQDLTFAPEPLQSQGRTLTEHVFKQIQTAIVLGQIPAGSKISEPELARTYGISRGPLREA IHRLEGQRLVERTAHVGARVVSLSLQQFKELYQIRASLEGLACKLAAQHIDKKQILALRD VLRMHAEDENFKAGKGYYLQEGQDDFHYCIIKSSGNKTLEKMLCDELYHLIRMYRIQFSN TPDRPSKAWDEHIRILDAIAEGDGELAELLMHRHINASYKIIEQTLLQAQGEHNNG >gi|333032490|gb|GL891936.1| GENE 27 30144 - 31028 1207 294 aa, chain + ## HITS:1 COG:PA0796 KEGG:ns NR:ns ## COG: PA0796 COG2513 # Protein_GI_number: 15595993 # Func_class: G Carbohydrate transport and metabolism # Function: PEP phosphonomutase and related enzymes # Organism: Pseudomonas aeruginosa # 5 294 7 296 298 462 82.0 1e-130 MAKQSAGQLFRDAVAQEKPLQVVGTINANHALLAKRAGYKAIYLSGGGVAAGSLGLPDLG ISNLDDVLTDVRRITDVCDLPLLVDADTGFGASAFNIARTTKSLIKFGAAAMHIEDQVGA KRCGHRPNKAIVTQEEMVDRIKAAVDARGDDSFVIMARTDALAVEGLQAAIDRAGAYIEA GADMLFPEAITELDMYKQFAQKTGVPILANITEFGSTPLFTTEELASADVSLALYPLSAF RAMNKAAETVYETLRKEGTQKNVVDIMQTRKELYERINYYAFEDYLDNAFAKKK >gi|333032490|gb|GL891936.1| GENE 28 31095 - 32252 1233 385 aa, chain + ## HITS:1 COG:RSp0121 KEGG:ns NR:ns ## COG: RSp0121 COG0372 # Protein_GI_number: 17548342 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Ralstonia solanacearum # 1 384 1 387 387 629 78.0 1e-180 MSSNETTTGFKPKKSVALSGQVAGNTALCTVGRSGNDLHYRGYDILDLAAGSEFEEVAHL LVHGKLPNKAELKAYKAKLKALRGLPAALKTALEQLPPSAHPMDVMRTGVSVLGCLTPEH EDHNEAGAKDIADKLMASLGSMLLYWYHFSNNGRRIEVETDDDSIAAHFLHLLHGEKPCE EWIQAMHTSLILYAEHEFNASTFTSRVVAGTGSDMYSAITGGIGALRGPKHGGANEVAFV IQQRYDNPDEAEADIRKRVENKEVVIGFGHPVYTVSDPRNEVIKKVAHDLAQAQENTKMY LIAERLEAVMKEVKNMFPNLDWFSAVSYHLMGVPTAMFTPLFVIARTAGWSAHVIEQRQD GKIIRPSANYTGPENLEFKPLAERG >gi|333032490|gb|GL891936.1| GENE 29 32252 - 34858 3178 868 aa, chain + ## HITS:1 COG:PA0794 KEGG:ns NR:ns ## COG: PA0794 COG1048 # Protein_GI_number: 15595991 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Pseudomonas aeruginosa # 1 865 1 865 868 1409 79.0 0 MNTKYRKPLAGTQLEYYDVRQAVEDIQPGAYEKLPYTSKVLAEQLVRRADAENLTAYLTQ LIERRQDLDFPWYPARVVCHDILGQTALVDLAGLRDAIAEKGGDPSKVNPVVPTQLIVDH SLAVEYGGADPDAFAKNRAVEDRRNEDRFHFIEWTKTAFKNVDVIPAGNGIMHQINLEKM SPVIQARDGVAFPDTCVGTDSHTPHTDALGVISVGVGGLEAENVMLGRASWMRLPDIIGV ELVGQRQAGITATDIVLALTEFLRKERVVGAYLEFFGEGADSMSVGDRATISNMTPEYGA TAAMFYIDQNTIDYLRLTGREDAQVALVEQYAKEIGLWASEMTKAEYPRVLRFDLSTVTR NIAGPSNPHARVSTSDLKEKGIAGVVENRSDGLMPDGAIIIAAITSCTNTSNPRNTVAAG LLARKANELGLVRKPWVKSSFAPGSKAAALYLEEAGVLKDLEKLGFGIVAYACTTCNGMS GALDPAIQQEIIDRDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTIRFDI EKDALGYDKEGNPIYLKDIWPSDAEIDALVKEAVKPEQFRKVYIPMFDLGEVEQAKSPLY DWRPQSTYIRRPPYWEGALAAPRTLANMRPLAILGDNITTDHLSPSNAILMDSAAGEYLH KMGVPEEDFNSYATHRGDHLTAQRATFANPKLYNEMVRRSDGTIKQGSKARVEPEGEVMR MWEAIETYMNRKQPLIIIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLVGM GVLPLEFKPGVNRKTLKLDGTELYSVIGNIAPRSTLTLVIERATADGKEEILEVPVTCRL DTEEEVSVYEAGGVLQRFAQDFLEGQIA >gi|333032490|gb|GL891936.1| GENE 30 34968 - 37436 1319 822 aa, chain + ## HITS:1 COG:no KEGG:A1S_0077 NR:ns ## KEGG: A1S_0077 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 822 1 822 822 1582 100.0 0 MEKNDTFLSDLLTTYKKLKLSDANEAETRKKLIDVVIENVLGWTTDDISYEERVSEDGET TYADYIIRTADVSILIEAKRLGSTFYTVPEKKKVKLSTFSEDDLTGKAIKQAREYCRKKS IPFAAVTNGSQWIIFPAVRTDSVSFSDSTALVFDSIERILGEESSHFRGLLSRDGVIEGN LALELIGRKTDQFDERRLNKFFKGISIKKENPIYPLIEGAVVSAFSDSIVDNDNSILEKC YVKNADRKKFDNRIEMHLQKREPLFNSQPKRPMRKRESSSLVDSINKASHNKKPLAILIL GTVGTGKTTFLQYTRRISSASFFEQKEKQPYPHWIEIDFRTFSKNENPLDFIYDKLFDYI KTDKFFCDYDRSIKFAYEKEINSLKSGPLFLLANSDEELKKRITDLLIADYQAIKPYVDK LIGYASKLSPIFLIIDNVDQFEDDFIQSEIFSDSIAIASRLGINLIIAMRESTFINHRSS PTFDAFDFDPLHIEPPEIPAVLSRRFFLTGKLLEGKSGEFIALNGANFKVEDLSVFIDIV KGSVLGTEVGEKIDVLSNHDVRLALRMTREFLARGYTDPAKALITHKPEKRYTLPKQEAF RSILLGNQSVYSEEYSVIGNPFDSRLNRSNTELLRIFVLSALVRKGSSNGQGYIEGQIIR DSLKTIGFSETDTLAILKDLCTLRFAHTKSHGKADINSSYFASRLGGHIIKSLIGDFTFI ENILMDTFISEKDQWEQLKSISSSIQEERDIVRKINQRIDRIKIFYELMISQYSILLSEA TKRGLDPIWLSNPLIEMKDTLWSNCDKAYASANRIYGENAQK >gi|333032490|gb|GL891936.1| GENE 31 37764 - 37898 93 44 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0095 NR:ns ## KEGG: ABSDF0095 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 44 34 77 77 92 100.0 3e-18 MVTAGEKPGTGFYFCAQCGHRVFLEINTDPLPPCTKCYCTQFKR >gi|333032490|gb|GL891936.1| GENE 32 38022 - 38597 715 191 aa, chain + ## HITS:1 COG:no KEGG:ABAYE3788 NR:ns ## KEGG: ABAYE3788 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 191 10 200 200 293 99.0 3e-78 METILGLCIGVGLSAACGFRVFVPLLVMSIATMMGWFEPSKGFEWLALPSVCLALGVATV CEVAAYYIPWVDNALDTVATPAAMIAGTLATMAVSSGEMSQFASWAAAIIVGGGTAGVVQ MSTVAARGVSTATTGGLGNFIVATGEWIGAILLSVSAMLVPALVAIVVLIAVIWVVRWIR HKKQEQAHTPL >gi|333032490|gb|GL891936.1| GENE 33 39003 - 39512 194 169 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|50365462|ref|YP_053887.1| acetyltransferase of 30S ribosomal protein L7 [Mesoplasma florum L1] # 1 157 1 159 170 79 34 9e-14 MTVILVKPHLRFKDSYNDYINELADEDRHPLTTEFDHTDFESFLNKLRDYEKGESLEEGH VPNITYWLVEDNEVIGASNLRLKLNEQIEYCGGHIGLGIRPSKRGQNFGSKLLELTIQEA WKLGLSELHIHCYKYNLASAKTIQANNGRLHSEITLNQVVQRYVVYKTL >gi|333032490|gb|GL891936.1| GENE 34 40563 - 41072 408 169 aa, chain + ## HITS:1 COG:yi5A KEGG:ns NR:ns ## COG: yi5A COG2963 # Protein_GI_number: 16131428 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Escherichia coli K12 # 1 163 1 167 173 76 31.0 2e-14 MPVPKHSKELKLKVIQAYLDGSKGYKILSQEFNVDLQTVRLWIENYKAQGEDGLNIKTKK TYYSSEFKIKAVQMLLDKVPVREVRRRLNLSGTSILRRWLAQYNKEGIAGFNTTRIYNNM VKHDKTKINKPVKDDKDKSQQELIDEVTALRAEVAFLKKLKALKLKQRT >gi|333032490|gb|GL891936.1| GENE 35 41342 - 41947 328 201 aa, chain + ## HITS:1 COG:RSc2265 KEGG:ns NR:ns ## COG: RSc2265 COG2801 # Protein_GI_number: 17546984 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 196 71 265 269 251 62.0 7e-67 MKSMGLKSRIRALKYRSYKSGCVGTIADNVLQRQFKANRPNQKWATDVTEFNLKGEKLYL SPIIDLFNGEIITFQIQRKLNYELVKDMLIHALTKLKRGEKPILHSDQGWQYQMAHYQQQ LKQHGLIQSMSRKGNCLDNAVIESFFGILKSECFHGEKFQSIDELENTIREYIHYYNHER IKVKLQGLSPVQYRNQFIKTA >gi|333032490|gb|GL891936.1| GENE 36 42299 - 43525 939 408 aa, chain + ## HITS:1 COG:PA1609 KEGG:ns NR:ns ## COG: PA1609 COG0304 # Protein_GI_number: 15596806 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Pseudomonas aeruginosa # 1 408 1 404 405 392 53.0 1e-109 MERVVITGMGINSCIGNTLEKVTESLKAGRSGIRYNEVYAKLNFRSHVSATAEMNFENID PELKKHMGVCAMYAYNSALDALQHAKLDVTDIANNSKYGVIGGTGGTSTASIIDMLHTLK EKGTSEVSPDLAPRYLTSTISSNLSRAFNLKGVSQSIASACATSADAIGYAYHLIAAGKQ DLMLAGGGEEDHWSQTAIFDAMGALCSKYNDAPETASRPYSVDNDGFVIAGGGGMVVLES LSHAQKRGAKILAEVVGYAANSDGVDMVAPSGEGATRCIKLALAEAKQNGSDTIDYINTH GTSTPAGDIPELLAIERAFGGEKVPPLSSTKSMTGHCLGAAGVHEAIYSILMLQNNFIAP SINITELREEAKKFDIVQTSRETELKTVMSNSFGFGGVNTCLVFRKWE >gi|333032490|gb|GL891936.1| GENE 37 43535 - 44227 774 230 aa, chain - ## HITS:1 COG:STM0654 KEGG:ns NR:ns ## COG: STM0654 COG0790 # Protein_GI_number: 16764031 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Salmonella typhimurium LT2 # 26 230 123 326 331 119 37.0 4e-27 MKIKKSAFYIFTMIFSLHSSAFAEPSVADVQYRAQQGQPIAQYHLGIMLLTGEQGVVKNY EQAFKWLTAADQNGSVGAKYSLGMMYFTGTGVEKDMKRAFEYFAKAADKGHAKAQYNLGV LYDRGEGTAQNYEQAFEWYSRAAEQGYPPAEYNLAHLYKKGHGVAQSDEQALKWYTKAAE HNESDAQYNLAQMYLNGEGTPKNLQLAKKWFQQAADAGDSDAKEMLKSLD >gi|333032490|gb|GL891936.1| GENE 38 44488 - 47250 2726 920 aa, chain + ## HITS:1 COG:RSp0518_1 KEGG:ns NR:ns ## COG: RSp0518_1 COG3501 # Protein_GI_number: 17548739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 598 1 586 586 273 31.0 8e-73 MQMSVSSILERLGLVSQNRAVHIQFSNQSLNQQVFLQCIEGEHTLNQGSVAELLCLSTNA HIALKQFIGCQVAVDQVTDTGQFFRTTGIITEASQGQSDGSLTIYNLTLKDPTALWHKRR NSRVFMNKSVRDISEILFKEWQGKSPLFASSITLDTSGLTKDYDVRPFVMQSNESDYDFL TRLWRSEGINWLVDESQLFIADPNASIQPQVLRLIDDNQNYQALERRSIRYQRSSATEQF DTITQVKAERRLQPTSVHVQRWQADALQQEEGSGSVQGTQKHSEHYDNASLNLEDAWHVS PAWMQDLNGEDQATASGNSQIEQLNQHINAYHHLSSKQFTVAGNVRDAQVGYWFELNDHP ELDQHDSADKEFLILSKHYYNQNNLPKELQQQLERLLPQGKLKAAQLDSQNPEQRHFAEL NVVRRNIKAVPEYNPLEHRPAAHPQRARVVGLEGESIHVDQWGRIKVRFLFTRADDHSHD GGAGSNDNDTDSAWVDVLTPWAGAGYGARFLPRVGEIVVIDFFDGNIDRPFVVGRIHEAE RHPTQFDQKGQLPDTKKLSGIRSEEVDGKGFNQLRFDDTTGQISAQLQSSHAASQLNLGN LSHPKDKAESDGRGEGFELRTDQWGAVRAGSGLLVSTHKQDQAQGVHLDASEAKQQIEGG LNNAKALSEVAKNQQTDPLEMLENLKTFIEQIEEKDQDKAAAFKQALMILTAPNSIALAS NEDIHLSADGQLNQTAGDSINLSTQKNLIAHAQNKISLFAAQQGARLYAGKGKVEIQAQG DGADLIARKAVQVISTEDKIEATAAKEIVLTAGGSQVKITGSGIFMTTSGKFEVKAGQHL FMGGGSVNSSLPYLPEQGKQKYGVWFDVMDKQGNKLKPGTEYIIFDEHDKEIERGKLDRT GLVKLETEEPNKQYKIHVVN >gi|333032490|gb|GL891936.1| GENE 39 47252 - 48082 610 276 aa, chain + ## HITS:1 COG:no KEGG:A1S_0086 NR:ns ## KEGG: A1S_0086 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 29 276 1 248 248 469 99.0 1e-131 MDNVIDANKDIKKQATELLKKAHGKVSNVPPVIPVKLTTYTHSLTIFIGGAADKYVFTPG DVPVGWGDFRPIGPTYFVGNYVNNYFATIKGGSKNAFVKYYGYEEAYVSDTRELTVNTNK DKKLNAFNDVKIFLKTYPQTQVNIVGHSLGGWNAAGLAEILHKNNICKVNVLITIDPVGE ILSKIGLGSRTSIYYSRPKPVFNLWISISCDPKSYEWNNDLIADLGGQWSSYPSSNSSYY YVTRYSHADFRLMMQEKIVNNLSVQDILSKELSRIK >gi|333032490|gb|GL891936.1| GENE 40 48079 - 48567 202 162 aa, chain + ## HITS:1 COG:no KEGG:AOLE_18930 NR:ns ## KEGG: AOLE_18930 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 162 1 162 162 240 83.0 1e-62 MKYFLLTLLSITLSACNPFINNEKASNNNAEIKSLTYSRLDGMSGDIFKFNLETNDDLNK IYQENNYKYSHFKCDNIKNYFVTGAISVEGEKLKKGKYTSSGYFKVCEDESMNVCIDKNQ LEKLLTSNMSCRVVFGGLLQSSKVVADNILISKEAIRKSNFQ >gi|333032490|gb|GL891936.1| GENE 41 48576 - 48986 193 136 aa, chain + ## HITS:1 COG:no KEGG:AOLE_18925 NR:ns ## KEGG: AOLE_18925 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 136 1 136 136 177 80.0 1e-43 MKKFLYLLGLIFLSGCSEKISNFTIEHTRKSNEKLNFATKIEDKEVLNKIKESSSKKIVC KNTANNNQMLDAYIDKIENNKIDVSVEFCSNYDNRSCEPINISSLKKINLECQAIFSAMI GNVSKSEKFPIVWEEK >gi|333032490|gb|GL891936.1| GENE 42 48988 - 49362 209 124 aa, chain + ## HITS:1 COG:no KEGG:AOLE_18945 NR:ns ## KEGG: AOLE_18945 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 6 124 5 120 120 170 70.0 2e-41 MFRNLKLDLITLGLPLLLMAGCGHEYTIEPERLPVAYVGKAYNQQLNISGGRVIPYSFEV ETNFPSDMNISISPIDEHEADAYNNLKISGVPKYKGTFTIHIYAGFYATGDGKLDKTYEF IVNE >gi|333032490|gb|GL891936.1| GENE 43 49408 - 49884 344 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325124075|gb|ADY83598.1| ## NR: gi|325124075|gb|ADY83598.1| hypothetical protein BDGL_003012 [Acinetobacter calcoaceticus PHEA-2] # 1 158 1 158 158 255 93.0 8e-67 MKKNLLITILILLFIIQSLINYYFWKSTKVPEIHVLEKPLKIYSFEGKYSKNSTLPEYYI LPEGTVLYDDSDSLNRRVMVYFNLQGVDFKFEEQDPDILKQPSEVSGIRSKDLPDLLKEI PLIKKDIYLIIKHDERIKDSVRSILFKEYKIDTSEYEK >gi|333032490|gb|GL891936.1| GENE 44 49973 - 50674 698 233 aa, chain - ## HITS:1 COG:PA0117 KEGG:ns NR:ns ## COG: PA0117 COG1028 # Protein_GI_number: 15595315 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 5 216 7 222 242 68 23.0 1e-11 MNNNIIIFGYGTGISKAVAHKFGKEGYKIGLVARNAQKLEKAILELKAQGIEAYAFACDL AVLEDIPNLIKRIKDQLGEIKNIHWNAFHDIEGNILETPPLELTKSFHIRVSSYIATVQA CLGDLEKNHGSILSTNGIFAFDAVGIDLVAKEYSSLATTAAAQYKTTNLLAHSLADSNVY VSQVIVNGFVDGTSGAQDKTYTVHPETIAGQFWYLHQHKQETVSFCGEAIQAA >gi|333032490|gb|GL891936.1| GENE 45 51475 - 52176 707 233 aa, chain + ## HITS:1 COG:mlr4962 KEGG:ns NR:ns ## COG: mlr4962 COG4420 # Protein_GI_number: 13474144 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 4 229 60 285 307 226 50.0 3e-59 MENKNQCRQCAVCGKSFPLKDLVSGEVIRNVISDEILKDHPDWSYSSFICRADLADYRIK YVQSLLRSEKGELSNLENEVIGSMQRHELISRNTESDFDQNWTFGEKLADKIASFGGSWA FLICFALFLTGWIVLNTVVIVVRPVDPYPFILLNLVLSCLAAIQAPIIMMSQNRQEAKDR LRSQHDYQINLKAELEIRHLHEKMDHLLSHQWERLAHIQEIQLDLLAEMNKKR >gi|333032490|gb|GL891936.1| GENE 46 52287 - 52952 420 221 aa, chain + ## HITS:1 COG:PM1836 KEGG:ns NR:ns ## COG: PM1836 COG0564 # Protein_GI_number: 15603701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Pasteurella multocida # 9 208 6 206 219 189 50.0 4e-48 MPLNDNFVYAPPQDPLSILFEDDDLIVVDKPAGLLSVMGRLPEHHDSAYLRVLEKFPLAK VTHRLDMATSGLLMFAKHRDAEVAVSKMFQARTVKKHYIALVQGQVKQEGSVEVPLITDW ENRPRQIVHFELGKHAKTLFQPLVYDATTDQSRVLLEPVTGRSHQLRVHMMHIGHPIMGD KLYHPEPKRFHLNRMALHAAYLAFQHPLKGTDVVIESQVPF >gi|333032490|gb|GL891936.1| GENE 47 53063 - 53437 405 124 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003427 NR:ns ## KEGG: ABBFA_003427 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 124 1 124 124 203 100.0 2e-51 MNRDYEQFPDDDNGNVLWQMVEDGDDLTELHEIEFSIAFQDQQNAEQCAMHLLYQEQKIS LFQDDSVEPNEWIITIFVTMEPEYSDIVDLEQWFSTIAEQFNGEYDGWGCMAYVFDEEED DILQ >gi|333032490|gb|GL891936.1| GENE 48 53466 - 53846 498 126 aa, chain + ## HITS:1 COG:no KEGG:A1S_0091 NR:ns ## KEGG: A1S_0091 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 126 1 126 126 251 100.0 7e-66 MSLSQKEIAVRFLELAAAGEVDEAYGNYTAPNFKHHNPYYAGDKTSLKEGMRESAVETPN KVLEVQHVIEDGALVAVHSKLEMQMNNKLTILAVVHICRFENGKIAEFWDIGQIQPDPLV NENGMF >gi|333032490|gb|GL891936.1| GENE 49 53891 - 55990 1688 699 aa, chain - ## HITS:1 COG:RSc2729 KEGG:ns NR:ns ## COG: RSc2729 COG1629 # Protein_GI_number: 17547448 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Ralstonia solanacearum # 32 699 25 689 689 464 38.0 1e-130 MRHKLGLLSSLGLSFISTLTWGEETSTVLETIRVQAESTREDVSQNSSATKFTHDVLDVP FNRAYLSKQIMEQQDVQRIDDALTLVSGVFHQNSFGGGFWDNYSFRGFSTDPNLGAAMIR NGLSVNRGINAPKDVVNIESLEFLKGPMAALYGRGETGGLLNLNSKKPQWESESELNLRA NTQEQYRISLEHTAPINDELAYRLAVAHEDNQSFRDHVSSERWFFSPQLTWKISDQTQLD FDSEFTEHKGTFDRGVSTVNHQFVMDPKTFTGEPDDGDLKIKDYFYQLRLSHEFNPDWKL NSAVSYKDAKMVGFATEPRRMQADGRTLERQRRYRDYTSEDVLAQTELLGKIDTSWARHE ILLSTELGQLDYKQNQLRRNHDSNSPTTVNTIDIYQPEYGKYLPNLTPFTDTKERQRYFA FNVQDQIFFNDQWSVLFGNRFDQVEQDFKNHIKQTEDNQTLHQNSPRFGVNFKASEQWAF YTNYGRSFAMNSGMNRNGQTFAPEKGKSYEVGTKYKINDQSVLSLALFKMKKQNVLTTDP IDKDFQTAAGELSSKGVEFDLNSQINDRWFVNANYSYTDAQIEKDQDLAKGARLSNVPKH QGSVSTNYEFLQDGARKAGVGANLTYVGERSGHNLDNGFNLPSYTLVNLNGYYAPSDRLR YQLNINNLFDKTYYVSSYSDLWVQPGEPLNASISAQWKF >gi|333032490|gb|GL891936.1| GENE 50 56066 - 57211 859 381 aa, chain + ## HITS:1 COG:PA4838 KEGG:ns NR:ns ## COG: PA4838 COG3503 # Protein_GI_number: 15600031 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 6 381 7 384 384 342 58.0 6e-94 MSLEKNIERLQSIDALRGLVIIIMLLDHVRETFYLHKQVTDPMDVTVTEPALFGSRLLAH ICAPVFVLLTGISAFLFQSKKQDLQQTRAFLLKRGLFLIVLELTLVNFAWTATFPPEVIY LQVIWAIGISMVVLACCVSLPLPVLAGVALVIIFGHNLLDSVHFSQGILQNIWFVLHERG WLEFAGIKLRTSYPVLPWIGVILLGYVLGQFFNSKYTAKQRSRTLLSLGLASIGLFVLLR FINVYGDQPWQHFESLQLSLMSFFNLTKYPPSLLFILLNVGIGLLVLVAFERMQQYSFLK PLVVFGSVPMFFYLLHLYVLKLMYVFALSVWGANYGNYLSVNHVWMLWLITIVLSFALYP AVKWFSKFKHQNKHISILKYF >gi|333032490|gb|GL891936.1| GENE 51 57252 - 57719 520 155 aa, chain - ## HITS:1 COG:PA5308 KEGG:ns NR:ns ## COG: PA5308 COG1522 # Protein_GI_number: 15600501 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 2 153 9 160 162 187 63.0 6e-48 MRPLDRIDRMILDILQREGRIAISELASRVNLSTTPCSERVKRLERDGIIMGYYARLNPA YVDRNLLVFLEIKLSAKSGDVFDQVARDLVEIPEVLECHLISGEFDYLVKARLKEMSAYR RLLGDLLKKLPASASSHSYVVMEEVKETLYLDVSK >gi|333032490|gb|GL891936.1| GENE 52 57838 - 59121 1392 427 aa, chain + ## HITS:1 COG:PA5304 KEGG:ns NR:ns ## COG: PA5304 COG0665 # Protein_GI_number: 15600497 # Func_class: E Amino acid transport and metabolism # Function: Glycine/D-amino acid oxidases (deaminating) # Organism: Pseudomonas aeruginosa # 7 424 1 419 432 596 66.0 1e-170 MREGMEMRVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQISPGYSTP WAAPGIPFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYAVNKERMMRVAEY SRDCLRELRKDTGIHYENRAKGTLQLFRKEAQMEAVQRDISVLEECGVSYELLNANELGR VEPALANAQDKLVGGLHLPNDETGDCYLFTNALAQIAKELGVNFQFNQNVEKLIVEGDQI KGVQVNGKILTADRYVLAFGSYSRDFLKPLDLQLPVYPVKGYSLTIPIVDPAFAPQSTVL DETYKIAITRFDQRIRVGGMAELSGFNLGLNEDRRATLQMVTQDLFPGGDMEQASFWTGL RPMTPDSTPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLNHKTDISTDGLSIQR YSHAHAA >gi|333032490|gb|GL891936.1| GENE 53 59142 - 60245 1264 367 aa, chain + ## HITS:1 COG:RSc1371 KEGG:ns NR:ns ## COG: RSc1371 COG0787 # Protein_GI_number: 17546090 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Ralstonia solanacearum # 1 361 1 355 375 400 56.0 1e-111 MPRPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKAADGFALLD LDEAKRIRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTIHSEAQIEWVEQHPYPAQFDV FLKMNSGMNRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAF EEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSL RSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRT VGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTAR VQFINQV >gi|333032490|gb|GL891936.1| GENE 54 60256 - 60615 477 119 aa, chain + ## HITS:1 COG:PA5083 KEGG:ns NR:ns ## COG: PA5083 COG0251 # Protein_GI_number: 15600276 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pseudomonas aeruginosa # 8 118 5 115 116 106 50.0 1e-23 MSNSDIQKINTNEVMSAVTVFNKVVYLSGQVPKNTEQDVAGQTREILATIDELLALANTD KSRLLSAQLYLKNLSDFSTVNAIWVDWLKGCVAPSRATIQADLVNPNWLIEIAVTAAQK >gi|333032490|gb|GL891936.1| GENE 55 60777 - 60989 200 70 aa, chain + ## HITS:1 COG:YPO1859 KEGG:ns NR:ns ## COG: YPO1859 COG1113 # Protein_GI_number: 16122110 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 9 51 15 57 474 77 81.0 5e-15 MTTARHSDMENSPDHLQRKLSNRHLQLIAIGGAIGTGLFMGSGKTISLAGPPPPRAKPSP SQVLQFSLFI >gi|333032490|gb|GL891936.1| GENE 56 60986 - 62254 1264 422 aa, chain + ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 1 414 61 468 470 453 57.0 1e-127 MIIGGMFFFLMRAMGELLLANLHYKSFVDMAHDLIGPWAGYYLGWTYWLGWVLVGIADLS AVINYLSFWLPDGASFSPIQQAMISAGCVLFVMGLNLLTVRLFGEIEFWFALIKILAIIG LIGVGGYMIFSHFQAPQGAVASISNVWSHGGLFPKGTEGFLAGFQIAVFAFVGVELVGTT AAETKDPQKNLPKAINAIPVRIILFYVLALFIVMSVTPWDHIRADKSPFVELFLNAGIPV SAIIMNLVVLSSVMSSMNSGVFSTSRMLFGLSKDGQAPGAFGRLSKRAVPSNGLIFSCTF IMGGAVLQYFVPNTMEAFTLASSLCVILFISVWSLIMVCYLRYRKLRPELHEKSTFKMPG GIWMSYVVLAFMLFTLVILALEPDTLKALYVSPVWLIILGVTYHVLYKPRMKRLGRELVN DH >gi|333032490|gb|GL891936.1| GENE 57 62625 - 64055 1600 476 aa, chain + ## HITS:1 COG:YPO1859 KEGG:ns NR:ns ## COG: YPO1859 COG1113 # Protein_GI_number: 16122110 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 14 469 20 469 474 517 59.0 1e-146 MTMVHHSDEASSPDHLQRKLSNRHLQLIAIGGAIGTGLFMGSGKTISLAGPSILVIYMLI GGMFFFLMRALGELLLANLHYKSFVDMAYDLIGPWAGYYIGWTYWLGWVLVGIADLSAVI NYLSFWLPEGASFSPMQQAMISAGCVLFVLGLNLLTVKLFGEVEFWFALIKILAIIGLIG VGGYMILTHFQAPHGDVVSISNVWSHGGLFPKGVSGFLAGFQIAVFAFIGVELIGTTAAE TKDPQTNLPKAINAIPVRIILFYVLALFVVMSVTPWNHIRADKSPFVELFLNAGIPISAI IMNLVVLSSVMSSMNSGVFSTSRMLFGLSKDGQAPSVLGRLSKRAVPSNGLIFSCIFIMG GAVLQYFVPNTMEAFTLASSLCVILFISVWILIMACYLRYRKIRPELHAASTFKMPGGVL MAYAVIAFFLFTLVILALEPDTLKALYVSPVWLVVLSVTYYVFYKPRMRKLGQEIF >gi|333032490|gb|GL891936.1| GENE 58 64113 - 64994 752 293 aa, chain - ## HITS:1 COG:SMc03122 KEGG:ns NR:ns ## COG: SMc03122 COG0583 # Protein_GI_number: 15966724 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 5 280 7 286 315 227 44.0 2e-59 MKVDWDHLQFFLVLARTKTLTNAARIIGVEHSTVARRIQALELALGTTLFKREATGYELT LEGMALVPRVEQMEQAFLQIEKPHQPLQGRVRIGTPEGFGTAFLARLLAEFSIQYPLLTI DLIPVPKMIKLSHREADIVVSIERPTSGPYIITRLSDYCLKIYGSQNYLAQNPPIRRLED LTQHRFVNYIDDLVYSPELYCLERLPLKLNANFRSSSILAQQIAVSAGAGLAILPKFLAD DKPELEEVLEQQVRFTHTFWMLTFVDLQHEPRIKLVWDYLRKQADKYQHLLVD >gi|333032490|gb|GL891936.1| GENE 59 65142 - 66677 1818 511 aa, chain + ## HITS:1 COG:RSp0650 KEGG:ns NR:ns ## COG: RSp0650 COG1012 # Protein_GI_number: 17548871 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Ralstonia solanacearum # 17 511 21 515 515 789 76.0 0 MTYGEVMNTIQKIELDTAKLLINGQFLESKTQEWQDIVNPATQEVIGRVPFATVEEVDAA IQAAQDAFASWRQTPIQARMRIMLKLQDLIRANMKEIAQVLTAEQGKTLADAEGDIQRGL EVVEHACSVGTLQMGEYVEGVARGVDTYTLQQPLGVCAGITPFNFPAMIPLWMFPMAIVC GNTFVLKPSEQDPLSTMMLVELAIQAGIPAGVLNVVHGGKEVVDRLCTHKDIKAISFVGS TAVGTHVYNLAGQHGKRVQAMMGAKNHVVVMPDANKEQTLNALVGAAFGAAGQRCMALSV AVMVGDSKQWIQELVEKAKTLKVNAGHEPNTDIGPVISKRAKARVIDLINSGVEQGAELL LDGRNVQVQGYESGNFVGATIFSGVNTDMRIYKEEIFGPVLSIICVDTLDEAIALINANP FGNGVGLFTQSGAIARTFQNLIDIGQVGINIPIPVPVPFFSFTGSRGSKLGDLGPYGKQA VQFYTQTKTITSRWFEDSHEVGGVNTTISLR >gi|333032490|gb|GL891936.1| GENE 60 66689 - 67579 771 296 aa, chain + ## HITS:1 COG:RSp0649 KEGG:ns NR:ns ## COG: RSp0649 COG2084 # Protein_GI_number: 17548870 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases # Organism: Ralstonia solanacearum # 1 296 1 296 298 280 58.0 2e-75 MNIAFIGLGNMGGRMAQNLLKAGLKVYGYDLSEVAIQHFAEAGGVVCDSPQDAAKQADVV ITMLPAAKHVKEVYLGENGVLEVLKAGSLCIDSSTIDPQTIKDIAAVAHSKNIKICDAPV SGGTIGAQAGTLTFMVGADEQTFNEVKPVLSHMGKNIVHCGDVGAGQIAKICNNLILGIS MAAVAEGMALGVKLGIDPQALAGVINTSSGRCWSSDVCNPWPHINENAPASRGYQDGFAT QLMLKDLGLAVEAAGQVKQPVLLGGMVQQLYQQMCMRGNAHLDFSSIIQQYLPQEA >gi|333032490|gb|GL891936.1| GENE 61 67661 - 69310 1749 549 aa, chain + ## HITS:1 COG:PA2555 KEGG:ns NR:ns ## COG: PA2555 COG0365 # Protein_GI_number: 15597751 # Func_class: I Lipid transport and metabolism # Function: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases # Organism: Pseudomonas aeruginosa # 1 541 1 541 555 724 63.0 0 MMDYQNAVQAFDLESTAKQMLSGSLDALNACYECCDRHADGDKIALYWQGKDGRKEQYTF RELKEWSSQFANFLKSQGVKAGDRISGLLPRTPELIVTILAAWRIGAVYQPLFTAFGPKA IEHRIQLAQSKLVVTDMGNRSKLDEIEKCPAIMTVADAQGTPLKAGDFNFWNEVKQQSDQ CDLVMRSIQDPFLLMFTSGTTGPAKPLEVPLKALIAFGRYIQDAIGLTEEDSFWNIADPG WAYGLYYAITGPLFLGHATLFYEGGFSTDSLCQIVKDYKVNNLAGAPTAYRMMMAADPAQ MAPLKGQFRVVSSAGEPLNPEVIRWFKQVLDAPIYDHYGQTEVGMVVCNHHGLKHEIHAG SAGFPSPGYRVAIVNEQGEELPPDTPGILAVDISQSPMMWFGGYKESRKSPFVGHYYLTG DTAELHADGSMSFVGRSDDVITTSGYRIGPFDVESALLEHDAVIEAAVIGVPDPDRTEVV KAFVILAAGVQPSDALAEELSQFVKRRLSAHAYPRLVEFVSELPKTPSGKIQRFLLRNQE IAKQQAKAG >gi|333032490|gb|GL891936.1| GENE 62 69322 - 70449 1463 375 aa, chain + ## HITS:1 COG:PA2552 KEGG:ns NR:ns ## COG: PA2552 COG1960 # Protein_GI_number: 15597748 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 5 375 5 375 375 556 73.0 1e-158 MQFTEEQLLIRDMAKSFAQEQIKPNASDWDRDGTFPKETLTQMGQLGFMGMLVSEEWGGS DTGNLAYVLALEEVAAADGATSTIMSVHNSVGCVPILKFGTDEQKERFLKPLAQGEMIGA FALTEPHTGSDAAAIKTRAVKDGDDYILNGAKQFITSGNNAGVIIVFAVTDPSAGKKGIS AFLVPRETPGYEVIRVEEKLGLHASDTCQIALTDVRIHKSLMLGKEGEGLKIALANLEGG RIGIAAQAVGLARAALEEATRYAKERMTFGKPIFEHQTIAFRLASMATEIEAARQLVHYA ARLKEAGQPCLNEASMAKLFASEMTERVCSSALQVFGGYGYLRDFPIERIYRDARICQIY EGTSDIQRLVIARSL >gi|333032490|gb|GL891936.1| GENE 63 70471 - 71244 1007 257 aa, chain + ## HITS:1 COG:BMEI1945 KEGG:ns NR:ns ## COG: BMEI1945 COG1024 # Protein_GI_number: 17988228 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Brucella melitensis # 1 257 37 293 293 310 60.0 2e-84 MQWQSILLEKRNGVGLITLNRPQALNALNSELISEINQALDQLEKDREIGCIVLAGSEKA FAAGADIKEMADLAFPDIYLDDFFHLADRIAQRRKPLIAAVSGYALGGGCELALMCDFIY CADNAKFGLPEVTLGVIPGIGGTQRLTHAIGKAKAMEMCLTARQMGAVEAEQSGLVARVF SKEELLGQTLQAAEKIAARSLTANMMLKETINRAFEVNLTEGLRFERRMFHSIFATADQK EGMQAFVEKRQANFKNQ >gi|333032490|gb|GL891936.1| GENE 64 71257 - 72282 981 341 aa, chain + ## HITS:1 COG:RSc1298 KEGG:ns NR:ns ## COG: RSc1298 COG1024 # Protein_GI_number: 17546017 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 2 327 19 344 376 184 35.0 2e-46 MNTENHLMIERQGKLGVITLDRVTHLNALSLDMIEGIGAQLELWRNDAAVQAILIKSNSP KAFCAGGDIRYLYDSYKNGTADYKGYFSAEYKMLNTLREYEKPIIVVLDGYVLGGGFGLA QACHIVVSSEKSRFAMPETAIGFFPDVGATHFLSRLDDIGVYMAITGEQISSSDALYLDL IDYHVPSDQLQALQDALVEAPSLSKEGIEHIITRFITRPAESELKQLAEGIRKHFGFQHL DEIEQSLENEQDESLKTWASKILSILQQRSFIAKQTSLKLQHLGRGLSLQQCMQLERDLQ DIWFEHGDFIEGVRALIVDKDKQPRWQERNPELEQILEKLS >gi|333032490|gb|GL891936.1| GENE 65 72402 - 73754 1223 450 aa, chain + ## HITS:1 COG:RSp0985 KEGG:ns NR:ns ## COG: RSp0985 COG0477 # Protein_GI_number: 17549206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 19 421 3 402 409 358 48.0 2e-98 MQTIHGNGSHPKKSSHRLAGISSMVGTTIEWYDFFVYGAAAALIFNKLFFPNLDPLTGVL AAFATYAVGFIGRPLGGVVFGHFGDKIGRKSMLLLTLMLMGIPTVLIGLLPTYESIGYWA AIGLVILRFIQGMAMGGEWGGAVLMAVEHAPEGGKGFWGSLPQASTGGGLMLASIALGLV SLLPEQALFSWGWRLPFLASIILLAVGWYIRVKVPESPDFEKVKQQSEEVKVPAFQVFKN HPKQLITIILARAAENAWFYIASTFTLAYTTTQLGIPRQDILFATICGAAVILFMTPLCG HLSDKVGQRNMFMFGLCVLALYSYPFFSMLNTKDPILVWTAIVLAIGVVFPIMYAPQAQL FARQFPAEIRYSGISISVQLAGVLGGGLAPMIATKLLSIGQGNPYLIMFYIGSMAVVAII STSFMPRDWSYKKDETYYKKANLNLKTKID >gi|333032490|gb|GL891936.1| GENE 66 73847 - 74398 368 183 aa, chain - ## HITS:1 COG:RSp0779 KEGG:ns NR:ns ## COG: RSp0779 COG3916 # Protein_GI_number: 17549000 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: N-acyl-L-homoserine lactone synthetase # Organism: Ralstonia solanacearum # 22 183 20 181 182 167 50.0 1e-41 MNIIAGFQNNFSEGLYTKFKSYRYRVFVEYLGWELNCPNDEELDQFDKVDTAYVVAQDRE SNIIGCARLLPTTQPYLLGEIFPQLLNGIPIPCSPEIWELSRFSAVDFSNPPSSASQAVS SPVSIAILQEAINFAREQGAKQLITTSPLGVERLLRAAGFRAHRAGPPMTIDGYSMFACL IDI >gi|333032490|gb|GL891936.1| GENE 67 74477 - 74893 380 138 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3760 NR:ns ## KEGG: ABAYE3760 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 138 1 138 138 255 99.0 4e-67 MVSIPPHFSISTDGFIRMNENQLMSYPLQHIISTVESRHTEASQIFYYGFTEWATSQTPA LSTGWDWELIEINGITTVKRVGLPRSNIMIVDVSGMDIGFDINETLLEKKIDTLFWEPFI YAQINTSLTESSLSQTFS >gi|333032490|gb|GL891936.1| GENE 68 75654 - 76370 370 238 aa, chain + ## HITS:1 COG:RSp0778 KEGG:ns NR:ns ## COG: RSp0778 COG2771 # Protein_GI_number: 17548999 # Func_class: K Transcription # Function: DNA-binding HTH domain-containing proteins # Organism: Ralstonia solanacearum # 1 238 11 247 248 201 41.0 9e-52 MESWQEDLLSAFLVVKNEYQLFDIVKSTASRLGFDYCAYGMQSPLSIAEPKTIMLNNYPE AWQKRYVEGQYVKIDPTVQHCMVSLQPLVWSSQSAKTQAEKDFWEEARSYGLNVGWAQSS RDFIGTRGMLTLARSNDQLSEKEQKAQYTNMYWLTQTVHSSIAKIVNDVEFAKFNLYLTN REKEALRWTAEGKTSAEIAQILGVTERTVNFHLSNSMQKLNVNNKISAAIRAVMLGLL >gi|333032490|gb|GL891936.1| GENE 69 76991 - 78880 1249 629 aa, chain + ## HITS:1 COG:PA2424_1 KEGG:ns NR:ns ## COG: PA2424_1 COG0318 # Protein_GI_number: 15597620 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Pseudomonas aeruginosa # 9 566 11 562 670 379 38.0 1e-104 MAVMCTDNIIATLESHAKLNGNKIAFEYLGRQSGGIQSLTYADLNERVQHQAQILMSIVD SGDRAVLLFEPGLDFIVSFFACLKAKIIAVPVSLPFNRNGFSNILNIMNDCKPKIVLTTK KILELAGLITLKAQNENLILHAVDAELQRDLVEKDFPLITEKDICFLQYTSGSTGWPKGV IVTHKNIMANEVMIAEAFGTQPEDVGLTWLPVYHDMGLIGSVLQTVYVGLTCYVMSPLDF IRKPLKWLQFISEKGVTISGGPNFAYELCLHRITDEQAAALDLSRVRVLFNGAEPIKAHV MQRFMEKFNTQSKLRLDTFLPCYGLAEVTLLVSGVTGPLNAISLDRDKLNAHLVQTSQDQ TAVQVVSCGKISKHIDCRIVNPHTRKEVAAHEVGEIWLAGESVTAGYWQKPEVNQETFEA TILNEAGQPSQVHYLRTGDMGFIKNGDLYITGRLKDVIIIRGKNYYPQDIECSVEMAHPA VRKGCVAAVNFADSEGVTVVLEIKKKSLDKTLNFETIRTQVKEQVAADIGLPVDSVYLLH QGRINKTTSGKIRRRKIKEQIERGQLVCLTHPNRRTVIARNYVKNGLDVIRDREQRGQLI RYSSNLLNSMIKEREVRTLIFNRLKSALF >gi|333032490|gb|GL891936.1| GENE 70 78913 - 80706 1150 597 aa, chain + ## HITS:1 COG:alr4058_1 KEGG:ns NR:ns ## COG: alr4058_1 COG1960 # Protein_GI_number: 17231550 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Nostoc sp. PCC 7120 # 7 380 4 378 396 284 40.0 3e-76 MSLTSNLRQFQSAARLEQILGSVHDTNNDFSWSAAIERDEKEQYPQRAVDFLNAVGMNRF YVPSELGGRMEIGEELLYLHRVLARRDLTINSTYSTNAWSVIVWIGGNANQCQNIANRIL SGAAPALAYSEKAHGADLLSSEVTAQPSDSKYVLNGEKWSINRATLGDSLSLIAKTSNDR GPRSLSAFWLDKRHMASKGTYSLNRLPTVGMRGLDISGIGFNNAEIHKDALIGEEGQGLE LGLKTLQVTRAYCSSFSLGAGDTMLRIATEFAIERELYNKKVISIPLVREQLATAYAYLL AAEVLSLVGARGLHVCINQFSTWSPIVKVLVPEYVESLAKITSSVLGSRFFLRNAYADGM FQKAFRDHLIVSVFDGSSTVCLDSLSFQLKSANKGRSKKADHLNQAEAKARYRQLYDLQV ETGAIDFRELEIFNRDGDLVMESLETIIEMLNDSNVTVGLSAETLATLHERANQLLVEQR SLDQKIQDYFSNSEQSKEFETMRFSLARDYAELFARIAVLGFWVFNRHGLRPALQNGAWL IIFLNAAEGQTAPPMTSLRESTLADLLDRISTNHMLSVIDFALAPRDAKPVKKEITP >gi|333032490|gb|GL891936.1| GENE 71 80703 - 80963 362 86 aa, chain + ## HITS:1 COG:MT2108_1 KEGG:ns NR:ns ## COG: MT2108_1 COG3321 # Protein_GI_number: 15841536 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Polyketide synthase modules and related proteins # Organism: Mycobacterium tuberculosis CDC1551 # 22 80 1980 2038 2055 62 47.0 2e-10 MNKDKAYWSAIIRTLVAKEMRVEPETIDPDQKFTSYGLDSIVALSVSGDLEDLTKLELEP TLLWDYPTINALAEYLVSELQQGVAS >gi|333032490|gb|GL891936.1| GENE 72 80960 - 84919 3043 1319 aa, chain + ## HITS:1 COG:all2644_1 KEGG:ns NR:ns ## COG: all2644_1 COG1020 # Protein_GI_number: 17230136 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Nostoc sp. PCC 7120 # 17 1054 27 1074 1075 613 34.0 1e-175 MNNLARLEPEVLSRHAISAEQLGIWYIQRFEPTCSAYNMVVAFDVKVNQSLGNKPIEILE AVMHDYPLLRVSMPANDQGIEQLIWDRVYPNIIFSDARHIEASDLTQLVEQDTKQPFDLT QPPLWRIHCYERGQNHYVIAFVIHHALMDFWSIGLLLRDVSKRFGLVAESDAVNGIEFAQ YADKQQSNVIDDTDESLLFWKNALKHAPHVHSIPLDYPRPAVQQHKGSSLAFRVPESVSS GLINLAKDYEITLFGLVLSGFYILLHKLSNENNLVIATPVAGRLERSLRNALGQFVNTIA IHIDIDADQTLRQFKQQVQEQLRQSLKHQKVAFSRVVEAVAPKRDGSINPLAQIGMFWER LGGMDEFKELLLPIQTPATLVGQDLTLGSFPVRQQEGQLDITLEMGGEYQGELVGVLKYN TDLFSAQSAENMVQLLQAVLAEMVAHPERKIVELDIAPDYKDGIQFEALRGKVTDYAQHD LLGMILKQIVERGENHALTSNDHTVSYRELGQHIAGIAEYLRAHGITQGDRVGLMLDRTA LLPAAILGIWAAGAAYVPLDPNFPTERLQNIIEDAEPKVILTQTELMDGLNVSVPRLDIN QAGVVALEQVRETLAFGDIAYVMYTSGSTGKPKGVRIGHPSIINFLLSMNDRLQVTTETQ LLAITTYAFDISILELLIPLMYGGVVHVCPREVSQDGNQLVDYLNAKSINILQATPASWK MLLDSEWSGNAGLTALCGGEALDTILAEKLLGKVGCLWNVYGPTETTVWSSAARITDAKC IDLGEPLANTQLYVLDEQQRLVPPGVMGELWIGGDGLAVDYWHRPELTDAQFRTLPSLPN AGRLYRTGDKVCLRTDGRLTHHGRLDFQVKIRGFRIELGEIENVLKQIDGITDAVVLVKT TAGNDQKLVAYVTGQELDIAGLKKTMQIHLPAYMVPSAFIRLDEFPMTANNKLDRKAFPE PIFEQSNDYVAPRDPIEIELCTTFEQILSVKRVGIHDDFFELGGHSLLAVKLVNHLKKAF GTELSVALLAQYSTVERLGEIIRENKEIKPSIVIELRRGTSEQPLWLFHPIGGSTFCYME LSRHLNPNRTLRAIQSPGLIEADAAEVAIEEMATLYIAEMRKMQPQGPYFLGGWCFGGAI AYEISRQLRQMGQQVTGIVMIDTRAPIPENVPEDADDAMLLSWFARDLAAPYGKKLTIPA QYLRELSPDQMFDHVLKEAKAINVLPLDADPSDFRLYFDTYLANGIALQTYFPEPEDFPI LLVKAKDEQEDFGESLGWDQLVKDTLTQVDLPGDHSSIMYAENVVAVAQTIDQMYPIPA >gi|333032490|gb|GL891936.1| GENE 73 84944 - 88594 2659 1216 aa, chain + ## HITS:1 COG:TP0790 KEGG:ns NR:ns ## COG: TP0790 COG1033 # Protein_GI_number: 15639777 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Treponema pallidum # 168 687 18 537 888 175 27.0 6e-43 MVTIEHAFLIPAKIDKVFNYLANPANDAGWQLSCKHSELLDSTPRVGSKYEIGFSFIGRE MSFKGEITHLVPNELYAFKVVEGPFHYTGTYRFKPHPEGTWIEWVFEAEPGSFFGVLPPA LLKKMVLAQFKKDVDNLQALAQKGEAYESVGNENKPTLETNKPPHKTQQMMERYARWILS HRRIVLTVVMLLTLALAYLASGVKIIIDPDALAPKGHPYITSTKLIEKKFGSKYMVVIGI TPKKGDIYQPQVLEKVKRITEEVDNAPGVVRSTMMSLAARQAKGIEANAEGFDAKKLLPS SSVTQEDIDHLKKLLALNPTYMNSVVSKDQRTAAILLELEESPEGFQKMMGPINKIVESE QSKDMTISVGGNPVYLDKAEDYSKRINILFPIAVLVIGLLHFEAFRSKQGLILPLVTALL AVAWGMGMMGLFKQPMDIFNSPTPILILAIAAGHAVQLLKRYYEDFDRLIAQGMEPKAAN SEAVVQSLVRVGPVMVLAGGIAAAGFFSLLTFNIPTIRSFGIFTGIGIISTLVIEMTFIP ALRSMLPPPSVVKVKRKGLPIWDWIPNRIGDVILSVRPRMMLMTAIAAMGIFLAIGTSRI VVDNDSRNFFSRDLPMQQDDRFLNQSLGGTNSLYIMVDTKVRDGIENPEILKAIDNTEKF ANSIPEVGKTISIVDYIKRMNQAMNADQPQAFQVPATKDIVAQYLLLYSMSGEPTDFESY IDTTQRYAKITILLKTGSNHRIKEILESLKTYMAGQLGDKAVVSFGGDVTQTIALTETMV HGKLMNILQISFAVFFISALVFRSISAGLIVLTPLLFSILAIFGVMGWLDIPLNIPNSLI SAMAVGIGADYAIYFLYRLREILREEGGDIKDAIRKTLSTAGKASLFVATAVAGGYGVLS LSQGFHVHQWLAMFIVIAMLFSVFATLIMVPTMILILKPRFIFSSKKKSIPVAQTVVTSL LLGTALTMSMPKTSHADEVQDIVNRSDDASKFLSSTASAKFILTSKNGEQRVRLTKNMTK LAGNTQNNMRLTEFISPADVQGTTTLLIENAKGSDSMFVYLPALKKVRRLASANKGDAFI GTDFSYGDVLGYKLSDWKYTKLADGKFNGKDCYMIEATPINNTVKSDFGYSKRRMCILKD NFVTATIDIWDTAGKPLKHIEFTDIRPYGKVKPRWQAMKSMAKNLQTQHMTQVIVNDFAA EKTLSDKLFSPQSLEK >gi|333032490|gb|GL891936.1| GENE 74 88591 - 89865 893 424 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00144 NR:ns ## KEGG: ACICU_00144 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 424 1 424 424 800 97.0 0 MTQGAYWVFVCCSSFMLLQHTYADDSEMSFVSQNSARLDVWSSDRDLSSLKNIGQASFWS NGTLKFNPAFKLHYDIVVSDETDHTVNPDQVSKVNRNLRELYASYNWDQTFYLDLGRQIV VWGRADGINPTDNLSPRDYTRLVPDETDQRLGNDALKLTYIPESGTNKWTALWYPRSRSD VIPLRQIAGVQYDIDRKSRPAFAMRWDYSVDGLDVGASYFSGLDHMPDLSVLSASPTGEA TLQLKNNPMSVYGFDFSYNHNDLVWRGEAAYTKTDSNGSEDLIHKKNNLTVVMGPEWSLK NSTLSLVGVYKHTEDFKSADNLTNLLVREVYRYQQTISDQYEQDQYGAMLRYALNLLNDN LKLEFTGFYFAPEPNELLRVRINYNLNDHWQLNAGGDRFWGRNDTVLGQFRDNSLVYAQV RYNF >gi|333032490|gb|GL891936.1| GENE 75 89919 - 91784 1249 621 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00145 NR:ns ## KEGG: ACICU_00145 # Name: not_defined # Def: putative NAD dependent epimerase/dehydratase family protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 621 1 621 621 1253 98.0 0 MDNLNNAKKDNFSRKTILVTGAAGFIGSRLIVELLREGHQVIAALRNAATKKDKLLGFIA TQGLADPSISFVEYDLSRDFKLDSLLSDAQTKIHVIYHLAASFNWGISKAEAERTNIKSG LALIEWAATLKQLERFIWIGGYRVAAPPQESADELYCKHGGYEASKILGHQAFIEACKRL NVPWTAINPATVIDGFYNYGDMQCIGIADMIDKLYQGRLLALPGGRDTFLPLCNMQYIVS FLIRTMSYPETIAQEYMLLDPATPKFHRLVYLAAEHLGVSSPHLQIPKVLLEKLPEVLLD GSKEQLSFISTEHYHVAGAEAMAAKMGITDLISIMPYFSRWIDRLVFTRFGRMQVPTPNS FSYQNRYWTEIYTKQPVGSEKASALFLHGIPFDSACWSPIINKITYDQVAMMDLPGLGRS GSYEMMEDNNHQFIDTAAELLAPNSVVIAHSLGCLFALNLAKKYPDKVARLILISPYFVQ AQAAKMFQIQAISKLIFRFVPKDVIAKDLHPEGQQNLSVRYAMDSLRRMSVSKHISEYMH HINLPQQRAAQTALLSELRSKIEIIVGEKDPIVTPISPEIPVHIIAGAGHNPHVTHVEAV YDYLTPVLTKYISTTAQLSDV >gi|333032490|gb|GL891936.1| GENE 76 91945 - 92541 267 198 aa, chain + ## HITS:1 COG:SA0174 KEGG:ns NR:ns ## COG: SA0174 COG2091 # Protein_GI_number: 15925884 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Staphylococcus aureus N315 # 10 182 59 212 214 68 28.0 7e-12 MKSVLSDKLGILPHEVIIQLQPNGKPFVRGNKAIYFNLSHSADLIVFAVTEKREIGVDVE RMNHEFEWRRVDSVLAPSEIEWIQQNEWTNPTSVYQRFFQIWTLKESYIKCTGEGMSRHL KKLNFHVSPEHIQFCDLTNNDVQRTEQYHFKSYIYNYSFIFSLCLQQSHCLESFNIDCFQ LLPYISTHRITLEPCEHN >gi|333032490|gb|GL891936.1| GENE 77 93064 - 93372 413 102 aa, chain + ## HITS:1 COG:PA0857 KEGG:ns NR:ns ## COG: PA0857 COG0271 # Protein_GI_number: 15596054 # Func_class: T Signal transduction mechanisms # Function: Stress-induced morphogen (activity unknown) # Organism: Pseudomonas aeruginosa # 1 101 1 97 101 81 48.0 3e-16 MSLEQQLIERLQTLAPSHLEVINESAGHGGYFPGKESHFKVIVVSEEFNGLRLVQRHQKV YALASDLMNPGQIHALAIHAYLPSEWQGQAPASPECAHAPKS >gi|333032490|gb|GL891936.1| GENE 78 93384 - 93776 425 130 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0135 NR:ns ## KEGG: ABSDF0135 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 130 1 130 130 182 98.0 5e-45 MDAHLLTKLIHMTAVAAALMVFVLRASTLFIGVQGEQPNPAGRKVLVALQHLSFTVVFIT GAILLVMKNFQVQPWFYAKIILFLVLLSSLMKAFKKDDTILLAQRRAGLVISAIAFVAII ILVIVKPVFA >gi|333032490|gb|GL891936.1| GENE 79 93853 - 94695 839 280 aa, chain + ## HITS:1 COG:PA5028 KEGG:ns NR:ns ## COG: PA5028 COG1192 # Protein_GI_number: 15600221 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Pseudomonas aeruginosa # 2 277 1 254 255 235 48.0 8e-62 MLTRVVFNQKGGVGKSSITVNLAAISAKHGLRTLVIDLDPQANSSQYLLGEEATYAADKA VLEPNIENFFEDVLGNNQQKGLIGNALGSILKAPRNKDLDSFVHSTSFAKLDVLPASPTL GALEHALESKHKIYKLRDSIQSLIGRYDRIYIDTPPAFNFFTLSALIAADKVLIPFDCDV FSKRALQTLIENVLETQDDHNDRLEIEGIVVNQFQSQAKLPREVVQQLKDEGLPVLNSML PPSILMKESHQKNLPLAHLAPEHKLTQSYEALFSEIEPKR >gi|333032490|gb|GL891936.1| GENE 80 94706 - 95092 400 128 aa, chain + ## HITS:1 COG:no KEGG:AOLE_18715 NR:ns ## KEGG: AOLE_18715 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 128 1 128 128 179 97.0 2e-44 MKGLYIVPLAAATLLLGACATTVKPTYVSPTQYQSLSCQQLQSEYNRIQQYIDNGVQTPK STGMGVGLGLGGGWGRGGWGFGPSISVNMGQSSSTKNTELSRVLGQQEAIVQAAQFKNCP IIVRKKTN >gi|333032490|gb|GL891936.1| GENE 81 95308 - 95898 488 196 aa, chain + ## HITS:1 COG:RSc2088 KEGG:ns NR:ns ## COG: RSc2088 COG1280 # Protein_GI_number: 17546807 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Ralstonia solanacearum # 14 186 17 188 200 82 31.0 5e-16 MIESWFFVLAMLAVLLIPGPTNALLATAAHSQGLSKTFWLIPMEWLGYAYGISFWAVFIH LADPVWPALLLILHITSVLYVFWMAFRLWKTTHLQQFSQNHRNIRPRQLFFSTLKNPKSL LFAAGIFPAETWNSPENFLMVLAAFTLILIPAASFWMFFGRALLTGSMKKIKADHLYKGS AMLLILCMLPVVFRFF >gi|333032490|gb|GL891936.1| GENE 82 95906 - 96547 535 213 aa, chain - ## HITS:1 COG:PA4029 KEGG:ns NR:ns ## COG: PA4029 COG0586 # Protein_GI_number: 15599224 # Func_class: S Function unknown # Function: Uncharacterized membrane-associated protein # Organism: Pseudomonas aeruginosa # 4 206 6 208 221 225 56.0 5e-59 MELLDFILHVDQHLAEFITNYGTWIYGILFLIIFVETGLVVMPFLPGDSLLFAAGALAAS TGTMDPWLLGILLFIAAVLGDTVNYHIGRFIGPRVFEMNSRFINKQHLIKTHEFFARHGG KTIIFARFIPFARTFAPFVAGAGSMNYKFFLTYNIIGAFCWVASFVTLGYLFGGHPLVKD NFTHLIFGIIIISILPGVIGFIRQKLKNRKANV >gi|333032490|gb|GL891936.1| GENE 83 96741 - 97178 494 145 aa, chain + ## HITS:1 COG:ECs3983 KEGG:ns NR:ns ## COG: ECs3983 COG2259 # Protein_GI_number: 15833237 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Escherichia coli O157:H7 # 23 145 40 158 160 116 55.0 1e-26 MFNPNVVVKNIVTQPGADSFISLVARLLIAYIFLAAGWGKITGYAATAGYMEAMGVPGGL LPLVILVEFGGGLALLFGFQARFAAFGLGIFSILTAFLFHQGGADAAAQYNNGIHFMKNL AMAGGLFFLMLHGAGRISLDHAIEK >gi|333032490|gb|GL891936.1| GENE 84 97237 - 98466 1490 409 aa, chain - ## HITS:1 COG:FN1218 KEGG:ns NR:ns ## COG: FN1218 COG4399 # Protein_GI_number: 19704553 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 221 404 9 192 200 62 19.0 2e-09 MLQTMIADFQQHFWLYVSIPFMSGLIGYVTKVIAIQMMFSPLEFKGIKPFFGWQGIVPRK AEKMATTAVELMTAKLIKPEEIFARLDPKRIAKEIEKPLMAAAEDITREVAQEYQPGLWE GMPEFARQRLIRRVQSKAPEIVEHIMSEVQRDVNRYFDIKHLVISNLLKDKRLLNNIFKR VGKQEFKFFSNVGFVFGFGIGVIQMLCWIATQGKYPWMLPLFGGFVGFFSDWIALQMMFR PLYPKKILGYTWQGLFIKRQNEVAADYAALISKQLLTSRHMMEELFSGTHSARVIELVNR HVKQEIDMQAGVIRPLVVYAIGGEKYQNMKTQVAERIMQQLPETMKYVESYAEDAMNIRN TLIERMQKLTPSEFEGMLRPAFKEDEWALIAVGAVLGFVVGELQIQFML >gi|333032490|gb|GL891936.1| GENE 85 98842 - 100410 1958 522 aa, chain + ## HITS:1 COG:PA3769_2 KEGG:ns NR:ns ## COG: PA3769_2 COG0519 # Protein_GI_number: 15598964 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Pseudomonas aeruginosa # 204 522 1 319 319 530 79.0 1e-150 MTTNTQITEDRILILDFGSQYSQLIARRVREAGVYSEMYAFDMSEEDIRAFKPNGIILSG GPESVHEEGSPRAPQVVFELGVPVLGICYGLQTMSEQLGGKVEPGTVHEFGYAEVDIVKR DQLIGNLQDRENQLHVWMSHGDKVSQIPEGFTITASTPSCPVAAVSDETRRFYGVQFHPE VTHTAKGEELLSNFVHKICGCGGLWTPEHIIDLRVEQLREQIGNEKVLLGLSGGVDSSVV AALLHKAIGDQLTCVFVDNGLLRLNEGDQVMQMFAENMGIRVIRADAEARFLNALAGVTD PEAKRKIIGREFIEVFAEEARKLDGVKFLAQGTIYPDVIESAASKQGKAHVIKSHHNVGG LPDDLAFELVEPLRDLFKDEVRKLGTTLGLPHSMIYRHPFPGPGLGVRILGEVKKEYADI LRLADDIFMQELRDSGWYDKTAQAFAVFQPVKSVGVVGDGRRYAWVIALRAVETVDFMTA RFAHLPYELVDKISTRIMNEIKDVSRVVYDVSSKPPATIEWE >gi|333032490|gb|GL891936.1| GENE 86 100476 - 101264 756 262 aa, chain + ## HITS:1 COG:SA0049 KEGG:ns NR:ns ## COG: SA0049 COG1708 # Protein_GI_number: 15925756 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferases # Organism: Staphylococcus aureus N315 # 14 251 20 256 260 146 35.0 4e-35 MSDFIQLEYLQEKLQQLLAKSLFAIYLYGSAVDGGLGPESDLDVMVVVTQPLTSALREQL AQELLKISQPVGELQRPLEVTILLKDEIQSGNYPLSYEMQFGEWLREELKEGGTLNSQKD PDISILLRKARFHHTVLFGPALDQWAPEISDQELWQAMSDTYPEIVAHWDEDADERNQIL ALCRIYFSLVMKDIASKDNAARWVMSQLPPEQKFVLQRLIQEYRGEISKQNWQEEHYALQ PIVNFLSSKIEEQFEQKRNLIT >gi|333032490|gb|GL891936.1| GENE 87 101483 - 102010 534 175 aa, chain + ## HITS:1 COG:CC3691 KEGG:ns NR:ns ## COG: CC3691 COG1695 # Protein_GI_number: 16127921 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Caulobacter vibrioides # 26 175 2 152 152 110 43.0 2e-24 MRQQSEHHHAEHNDHHHGHHRSGRRGRLFEAGRMKLLVLHLIQQSPKHGYEIIKEISDLV GDGYTPSAGTIYPTLTSLEEMNLINLLDVERKQYQITEFGEAYLNEHQDKLSGLLEKLRL RREIHSNDQLIEIHRAMENLKTALRLKLNTTELKQEQIYQIAEKIDQAAVAIGRL >gi|333032490|gb|GL891936.1| GENE 88 102071 - 102376 362 101 aa, chain + ## HITS:1 COG:no KEGG:AB57_0173 NR:ns ## KEGG: AB57_0173 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 101 21 121 121 171 99.0 1e-41 MKQHQYHVTVQHLKDAKGEVSTYTERLEFYTGNHDDIFEIVEKLKNAEFFDDQTTKSFAV GLKLFSEVMLENRDHPLFQEFLPQFGQFMKNLKQQVKTQSP >gi|333032490|gb|GL891936.1| GENE 89 102533 - 103480 1111 315 aa, chain + ## HITS:1 COG:PA1205 KEGG:ns NR:ns ## COG: PA1205 COG1741 # Protein_GI_number: 15596402 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Pseudomonas aeruginosa # 1 313 1 314 315 313 47.0 2e-85 MSNNNDYDISDSKDCEKFANQFIQEFPIRSAEIGQGTVIKRALPSRQKRMIGAWCFLDHA GPVTFPAGNGLDVGPHPHIGLQTFTWMIEGTMMHTDSLGSKQLIRPKQVNLMTAGHGISH TEVAPDTETQMHAAQLWIALPDHKRNMDPKFEHYPDLPVVEKDGLEFTVLVGEYLETTSP VVVHTPLVGVDLIATQDTKTRIPLNPEFEYGFMALDGVAHVNGHELTADNMVVLDTGLNE IEIEVKKGNRVLLIGGEPFETPILLWWNFVARTMDDLKEAREQWVNHDVRFGEIPDYVGA RLEAPVLPDQMRASK >gi|333032490|gb|GL891936.1| GENE 90 103477 - 103884 421 135 aa, chain + ## HITS:1 COG:SMa1898_2 KEGG:ns NR:ns ## COG: SMa1898_2 COG1765 # Protein_GI_number: 16263497 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Sinorhizobium meliloti # 16 132 24 155 156 77 37.0 5e-15 MTAVIASSKAKPLAEQWKGEITSGRHQYFCDEPEKLEGHDQGPAPYDLLTGSLAACTLIT LRMYAKHKGYDFGEYSVEIDFHTNREHEEHIERRIVFKELPNEELQQKILTICSKTPVTK TLLRSLDIHTVLVTA >gi|333032490|gb|GL891936.1| GENE 91 103997 - 104665 480 222 aa, chain + ## HITS:1 COG:CC2843 KEGG:ns NR:ns ## COG: CC2843 COG0625 # Protein_GI_number: 16127075 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Caulobacter vibrioides # 1 211 1 214 220 178 45.0 9e-45 MISVHHLECSRSFRILWALEELGLDYDIHFYQRLPNYSAPETLKCIHPLGKAPILTDDEQ VIAESAVILEYLQQRYDQKQQFKPKQAQDLQQYIYWMHYAEGSLMPLLVMTLVMNNVNKH VPWLIQPVAKKITEGVKANFVRPRMKDHISFLENYLAEHEYFAGDFSFADIQMSFPLEAL QSRLQGKYPHIQAFLHRIQQRPAFQKARQKGLGSNERNCADI >gi|333032490|gb|GL891936.1| GENE 92 104709 - 105335 762 208 aa, chain - ## HITS:1 COG:PA5052 KEGG:ns NR:ns ## COG: PA5052 COG3087 # Protein_GI_number: 15600245 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Pseudomonas aeruginosa # 70 208 93 228 231 58 29.0 7e-09 MFGKTQRGVSERPNKPKKPLIPKWLGTLVAILAVLCIAVMLMLWKPWQPVSSKNQITSEH YKEEETNKDYRFYDLLPQQQVTPIPEQAIPESKNQGTAMIVEAPSTAQPAASEPASVSTD DTTDSTAAIPQQPNYILQVRSYTDPDQADARRAEIILNGLSADVIKSSENGKTWYRVISG PYDTQEAALAAQQTLQHSGIDSIVIKRK >gi|333032490|gb|GL891936.1| GENE 93 105489 - 107279 1954 596 aa, chain - ## HITS:1 COG:BH3808 KEGG:ns NR:ns ## COG: BH3808 COG0018 # Protein_GI_number: 15616370 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Bacillus halodurans # 32 596 35 556 556 436 41.0 1e-122 MNTAIQAALDHAVQTLQQEGVLPSDWNNSSNLTRTKDRSHGDFASNIAMIGSKAAGMKPR DLAEKILAVLPEVADINKAEIAGPGFINFFLNADQRFAILDQIQAQKESFGRSQSNAAKK IQVEFVSANPTSSLHVGHGRGAAYGMTVANLLEATGAKVDREYYVNDAGRQMDILATSTY LRYLELLGQNLVFPKNAYQGDYVKEIAQGIIDKDGDAYVREVANVYKDVPEDVQYAEELD SEGNKVVLSGDKEKHIDGLIANSQQLLGEGYRVFHQAALHAILDDIKDDLADFGVTFNQW FSEASLSAKIDEALETLDQRGFLYEKDGNIWFKSTEFGDEKDRVVKRRNGQTTYFASDIA YHLNKLQRGYTDLVDIWGSDHHGYISRVKAAIDAMGYDSKKLTVLLVQFVSLWRGGEMVQ MSSRSGQFVTLRDLRKEVGNDAARFYYVMRKSEQHIDFDLDLAVSQSKDNAVYYIQYAHA RICRMLEKAASTGLQFEVSAARSHAARLSLDAETEILAKLAAYPDVVLRAANAYEPHQVG NYLKELAALFHGWYNEHKVLSDDAELTQARLLLSINVQQVLRNGLELLGVSAPEAM >gi|333032490|gb|GL891936.1| GENE 94 107775 - 109472 1770 565 aa, chain + ## HITS:1 COG:YPO1511 KEGG:ns NR:ns ## COG: YPO1511 COG0281 # Protein_GI_number: 16121784 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Yersinia pestis # 5 565 5 565 565 844 71.0 0 MISGHPSKHPLYIPYAGYTLLELPLLNKGSAFTQEERSNFNLHGLLPHIIETIEEQSQRS YQQYCAFNDDINKHIYLRNIQDTNETLFYHLIENHLEEMMPIIYTPTVGEACQRFSDIYR RHRGVFISYPDRDVIDDILQNVNKNNVKVIVITDGERILGLGDQGIGGMGIPIGKLSLYT ACGGISPAYTLPITIDVGTNNPQLLNDPIYMGWRQPRISGDEYYDFVDMVIEAVKRRWPK ALIQFEDFAQKNAMPLLEKYRDKICCFNDDIQGTAAVSVGSLIAASRAAGKQLKDQTIAF LGAGSAGCGIAEQIVAQMVSEGLTDAEARARVYMVDRFGLITENQPNLLDFQRKLAQKAE VVDQWGNIEEVISLLDVVKNAKPTVLIGVSGQPGLFTEEIIKTMAANCERPIVMPLSNPT SRVEAVPADIVEWTEGKALIATGSPFAPVNHHGKLYNISQCNNSYIFPGIGLGVVASGAK RVTENMLMASSSALADCSPLLKDPQADLLPPLGEIQQVSKVIAFEVAKAAMADGVAVTIS DDLLNQKIDQSFWKPEYRKYKRIPF >gi|333032490|gb|GL891936.1| GENE 95 109518 - 110438 1211 306 aa, chain - ## HITS:1 COG:PM0455 KEGG:ns NR:ns ## COG: PM0455 COG2837 # Protein_GI_number: 15602320 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted iron-dependent peroxidase # Organism: Pasteurella multocida # 1 303 1 296 296 205 42.0 1e-52 MTAQSVILPLPSDHARFIVLRLKDLTIAELKEQLEALFETRDRLITQHSDAQIKTAVAFG PELWKQLYSQSPAGFKQLEPENGAFNMPVVPADVLIHIASMRSDICFALSQAFFEGIKDK VEVLDERVCFRYFDGRDITGFIDGTENPQFPDDRAETALLPESAGVFADGSFIFAQRYAH DLEKWKKLKVDAQENVMGRTKLESIELDDDVKPENAHVARTVVEDEEGEEMEILRHSLPY GDGRGDQGLFFIAYTKDLSIIDAMLKRMFGTSGDGIHDRLLHFVTPLDGAYYFAPSEELL EEILEA >gi|333032490|gb|GL891936.1| GENE 96 110597 - 111223 651 208 aa, chain + ## HITS:1 COG:PA5249 KEGG:ns NR:ns ## COG: PA5249 COG1280 # Protein_GI_number: 15600442 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 1 207 1 207 209 233 61.0 3e-61 MSLQVWFAYMLACWVISISPGAGAIASMSSGLNYGFRHGYWNAIGLQIALLIQIMIVAAG VGVLFATTPLAFQAVKWFGVAYLLYLAYLQWRAPVKDIEIQHEKKDKSVSALLFNGFVVN ISNPKAIVFLLAVLPQFLDLSKPQWIQYLIMAATMVTIDLIVMAGYTGLASKVLRLLRSP KQQKYLNRGFAVMFSCAALLLSTVHQAA >gi|333032490|gb|GL891936.1| GENE 97 111225 - 112034 849 269 aa, chain - ## HITS:1 COG:HI0407 KEGG:ns NR:ns ## COG: HI0407 COG1108 # Protein_GI_number: 16272356 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Haemophilus influenzae # 5 255 2 253 261 143 36.0 4e-34 MMEWLQLLLPAWIMGTLLVFLTAPLGCLMLWRRMSFFADTMAHGTLLGVAIAGALSLPLW LGVAGTAILLVAILWALHDNRLPNDALLALCSATLLCSGLLFIQHVPSLRPELLSYLFGD LLSIDWPDLPIFTLIIAVSLAILYRYWQPQIQIAIDPDIAISEGVNAKWQRLIFMLLLAL FTVLALRAVGSLLMGALLVIPALSARLLAHSPKQMVIWAFVLAQLGVSVGLWSSAALNIS TGLSIVLCMALSFALIFMVQKIKNQTQAA >gi|333032490|gb|GL891936.1| GENE 98 112038 - 112817 208 259 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 10 217 1 231 245 84 25 2e-15 MPHSSLNPVLIQLEQVSVHRDQRDILKKVDFALHENEIVTLIGPNGAGKSTLIKVLLGIL KPSSGRVISNKKLKMAYVPQKFNPSHSLPLRVQDLLDLEKCSPALRQEIIQDTGIAKLQQ SKVQQLSGGERQRVLLARALLRKPDILVLDEPMQGLDIQSEAELYEYVRSLPERYGCAIL IVSHDLQWVMQGTQRVVCLNKHICCSGLPESIQQHPEYQAIFGTQRVFYQHHHDHCAHGD AAHPCPHNSRPHIHPEPEA >gi|333032490|gb|GL891936.1| GENE 99 112799 - 113296 424 165 aa, chain - ## HITS:1 COG:PA5499 KEGG:ns NR:ns ## COG: PA5499 COG0735 # Protein_GI_number: 15600692 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Pseudomonas aeruginosa # 16 165 15 165 167 130 45.0 1e-30 MSSCMHEHHDSLHGVHDHHNVASRLAEAETLCTAVGARLTPLRKEVLELILNASGPMGAY DLLARIKSETDRPAAPPTVYRTLDFLLEKGLIHRLTSINAYIPCCHPREGHQAAFLICTE CHTVKEASSQGLTQQLDQLAALDDFAAQHSIIEISGKCQQCRTAR >gi|333032490|gb|GL891936.1| GENE 100 113460 - 114263 725 267 aa, chain + ## HITS:1 COG:BMEII0178 KEGG:ns NR:ns ## COG: BMEII0178 COG4531 # Protein_GI_number: 17988522 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Zn2+ transport system, periplasmic component/surface adhesin # Organism: Brucella melitensis # 2 218 15 275 328 96 27.0 6e-20 MSTLGWSQGLVVSTHPIYLIAKEITKGVEEPQLLLQGQSGHDVQLTPAHRKAINDATLVI WLGKAHEAPLNKLLSNNKKAIALLDSGILSILPQRNTRGAALPNTVDTHVWLEPNNAVRI GFFIAALRSQQHPENKAKYWNNANTFARNMLQAAQAYDSSSNGKPYWSYHDAYQYLERSL NLKFAGALTDDPHVAPTAAQIKYLNDSRPKAQMCLLAESFTTKGQYQKLGSITFQPVDES MNNEDNFVTAWKKLAIKTDKCVLNTQK >gi|333032490|gb|GL891936.1| GENE 101 114433 - 114831 294 132 aa, chain + ## HITS:1 COG:PA5561 KEGG:ns NR:ns ## COG: PA5561 COG3312 # Protein_GI_number: 15600754 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit I # Organism: Pseudomonas aeruginosa # 27 131 21 125 126 60 34.0 7e-10 MSQTSRLIDRRLAKALVFLQACMIPVSALVAWSIKDMTAALSAALGALVCWLATSYFAWQ SFRTAGARASKQVLSNMYRGMLGKFAIMIVGFILILSNVKPLSPLALLFGFILVQAMSWV APFWVSRLQKRV >gi|333032490|gb|GL891936.1| GENE 102 114936 - 115811 790 291 aa, chain + ## HITS:1 COG:PA5560 KEGG:ns NR:ns ## COG: PA5560 COG0356 # Protein_GI_number: 15600753 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Pseudomonas aeruginosa # 1 289 1 286 289 314 57.0 1e-85 MAAEEHALTSTEYIKHHLTNMTYGKMPDGTWKLAETAEEAHSMGFTAIHLDSMGWSIGLG VIFCLLFWIVARAANAGVPTKFQSAIEMIIEFVDSSVRDTFHGKSRLIAPLALTIFVWIF LMNLMDLIPVDWIPQVAAFVGANVFGMDPHHVYFKIVPSTDPNITLGMSLSVFVLILFYS IREKGVGGFVGELALNPFNPSNPVAKALLIPVNLILELVTFLARPISLALRLFGNMYAGE LIFILIALLPFWIQWALSVPWAIFHILVITLQAFIFMMLTIVYLSMASEKH >gi|333032490|gb|GL891936.1| GENE 103 115896 - 116141 403 81 aa, chain + ## HITS:1 COG:PA5559 KEGG:ns NR:ns ## COG: PA5559 COG0636 # Protein_GI_number: 15600752 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Pseudomonas aeruginosa # 1 81 1 81 85 86 74.0 1e-17 MELTLGLVAIASAILIAFGALGTAIGFGLLGGRFLEAVARQPELAPQLQTRMFLIAGLLD AVPMIGVGIGLFFIFANPFVG >gi|333032490|gb|GL891936.1| GENE 104 116180 - 116650 663 156 aa, chain + ## HITS:1 COG:VC2768 KEGG:ns NR:ns ## COG: VC2768 COG0711 # Protein_GI_number: 15642761 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Vibrio cholerae # 1 156 1 156 156 131 56.0 6e-31 MNINLTLIGQAIAFAFFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQ VKQELDAAKAQAAQLIEQANRRAAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREEL RQQVAALAVTGAEKILNQQVDAEAHNAMLSQLAAKL >gi|333032490|gb|GL891936.1| GENE 105 116663 - 117199 615 178 aa, chain + ## HITS:1 COG:NMA0516 KEGG:ns NR:ns ## COG: NMA0516 COG0712 # Protein_GI_number: 15793514 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Neisseria meningitidis Z2491 # 1 176 1 175 177 121 39.0 9e-28 MAELLTLARPYAKAAFAYASEQGATDNWSNALQVLSAAVQDEAFSAYLNRPELTPAEQVK LFAKVLGEDQSQAVSNFLTLLADNDRLVLLPEIAAEYEQLKSQNNNNVDVVIESAFPLTA EQEQLLKSALEKRFNSTVTVSVEVKPELIAGVVIRAGDQVIDDSALNKLEKMRTRLLA >gi|333032490|gb|GL891936.1| GENE 106 117246 - 118790 1816 514 aa, chain + ## HITS:1 COG:PA5556 KEGG:ns NR:ns ## COG: PA5556 COG0056 # Protein_GI_number: 15600749 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Pseudomonas aeruginosa # 1 514 1 514 514 822 83.0 0 MQQLNPSEISALIKQRIGDLDTSATAKNEGTIVMVSDGIVRIHGLADAMYGEMIEFDGGL FGMALNLEQDSVGAVVLGNYLSLQEGQKARCTGRVLEVPVGPELLGRVVDALGNPIDGKG PIDAKLTDAVEKVAPGVIWRQSVDQPVQTGYKSVDTMIPVGRGQRELIIGDRQTGKTAMA IDAIIAQKNSGIKCVYVAIGQKQSTIANVVRKLEETGAMAYTTVVAAAAADPAAMQYLAP YSGCTMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLE RASRVSAEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETSL FNAGIRPAVNAGISVSRVGGSAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRK QLEHGQRVTELMKQKQYAPYSIADQAVSVYASNEGYMADVEVKKIVDFDAALIAYFRSEY APLMKQIDETGDYNKDIEAAIKAGIESFKATQTY >gi|333032490|gb|GL891936.1| GENE 107 118868 - 119737 1018 289 aa, chain + ## HITS:1 COG:PA5555 KEGG:ns NR:ns ## COG: PA5555 COG0224 # Protein_GI_number: 15600748 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Pseudomonas aeruginosa # 1 289 1 286 286 369 65.0 1e-102 MANLKEIRAKVASIKSTQKITRAMQMVAASKMRRAQERMAQGRPYADNMRRVIAHLVQAN PEYKHRYMVDRPVKRVGYIIVSSDRGLAGGLNINLFKKVVQHVKAQQEQSIEVQFALIGQ KAVSFFKNYGGKVLGATTQIGDAPSLEQLTGSVQVMLDAFDKGELDRIYLVSNGFVNAMT QKPKVEQLVPLAPAEEGDDLNRTYGWDYIYEPEAEELLNGLLVRYIESMVYQGVIENVAC EQSARMVAMKAATDNAGQLIKDLQLIYNKLRQAAITQEISEIVGGAAAV >gi|333032490|gb|GL891936.1| GENE 108 119768 - 121162 1853 464 aa, chain + ## HITS:1 COG:XF1143 KEGG:ns NR:ns ## COG: XF1143 COG0055 # Protein_GI_number: 15837745 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Xylella fastidiosa 9a5c # 1 464 1 464 466 767 81.0 0 MSSGRIIQIIGAVIDVEFERTSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEG LKRGLTVTSTNAPISVPVGTATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAA STDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDEKDENGKGR DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQA VYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYE IARAVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFHVAEVFTGAPG KLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL >gi|333032490|gb|GL891936.1| GENE 109 121180 - 121599 637 139 aa, chain + ## HITS:1 COG:atpC KEGG:ns NR:ns ## COG: atpC COG0355 # Protein_GI_number: 16131599 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) # Organism: Escherichia coli K12 # 3 135 4 136 139 121 50.0 4e-28 MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA LAETAAQLETIRKIKNRAQ >gi|333032490|gb|GL891936.1| GENE 110 121748 - 122230 444 160 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00180 NR:ns ## KEGG: ACICU_00180 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 160 1 160 160 315 100.0 4e-85 MKFKYWLPILVSTAFVGCASVPQANPQLAQQAKQLTAPTNGNAVIYVYRSNNIVGSALKK DVWVDGECLGETARGIFFYKEVAGNQEHTVSTESEFSPNHLKFKTEAGKKYFVQQYIKPG VFVGGANLKLVDDAQGQKAINEYRLAEAGKCSKATIALVN >gi|333032490|gb|GL891936.1| GENE 111 122279 - 122878 630 199 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3714 NR:ns ## KEGG: ABAYE3714 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 199 10 208 208 299 100.0 5e-80 MKKVLQGAFFPFVIFASGMLLLGCDQAQDHAKEQESVQTNDQISEQADDSQQEITATQNK TELKNGNVFYIVRDAANLQLKAGDYIEKLKDTQLDVEQAIQDKDQHELKTTVTTLKAQLE GLNQALLGLDIRSQEVENIRQSLLQANQQALSMPLLNGKLEQINFDQIEKQLNTIQMDMV KLAAMIMAGDEKSDSKTDS >gi|333032490|gb|GL891936.1| GENE 112 123024 - 123569 789 181 aa, chain - ## HITS:1 COG:ECs2417 KEGG:ns NR:ns ## COG: ECs2417 COG0386 # Protein_GI_number: 15831671 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Escherichia coli O157:H7 # 1 181 1 183 183 180 49.0 1e-45 MTQSVYHIPVKAISGETVDLDQYKGKVLLIVNTASKCGLTPQYEGLEKLYQAKKDQGLEI LGFPANNFKEQEPGSDEEIQQFCSLNYDVHFPLFSKISVAGEDKHPLYQALTTAQPERIG EGPFRERLEGLGIPTNPAPEVLWNFEKFLVNKNGEVVARFAPNLTADDEQIVKAVEAELA K >gi|333032490|gb|GL891936.1| GENE 113 123692 - 124456 562 254 aa, chain - ## HITS:1 COG:PA4288 KEGG:ns NR:ns ## COG: PA4288 COG2207 # Protein_GI_number: 15599484 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 29 252 34 256 267 131 33.0 1e-30 MKNEDQQFSLLESIEVHEFLYEKEDIVRPHASLWGDFNFSLNGILEIQVEEQIYLSPPSY GLWIPPQTVHQSTHIDHEIHYICIRLHPRLCSILGDICRCFSIQPFFRTLVLQILEQQKQ TEKPEYLEHLLQVLFDQLQQASAYSHYLPQTRHPVLLPILEKLSDPLLFNLSLQQLLQNF SVSDRHLLRLSQQELQLSLSEWRNRAKIVYAIHQIRQGTPIKRLAYDLGYQHSSSFIEFF KRYTGQTPVQIRNN >gi|333032490|gb|GL891936.1| GENE 114 124478 - 125692 1341 404 aa, chain - ## HITS:1 COG:mll6183 KEGG:ns NR:ns ## COG: mll6183 COG2814 # Protein_GI_number: 13475166 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Mesorhizobium loti # 1 389 76 457 475 221 34.0 3e-57 MDQSTTSKARPMTSTQGSWFAILAVAIAAFALVTSEFLPVGVLNSVAADLHISVGTAGLI ITVPGIMAAIAAPLLPVSVKQLDRRYVLILLTAIMVIANTITAFAENFHVLLLSRLILGI SIGGFWATAIALSGKLAPANLPIAKATAVVMAGVTFATVLGVPIGTWLSEFYGWRSAFGI TAAIGLVVLVLQLIFLPKLLPESAIHIRDLPALLRTPKARSGMLIVLLIGLAHFCAYSYL APFFKNVAGFNGTTISSLLLLYGIAGIFGNAFAGYSGNLNVRYTLAFVGTCFAIVFFGFP IFAIHEFGAIVLTALWGFAFGAFPTSANIWMFVHAPHAVEKGMPLFVGMFQVMIATGSLL GGYVVDHFNENTLIYGVLSFVALALISTFTLAKGLNNPKATCEN >gi|333032490|gb|GL891936.1| GENE 115 125838 - 126479 632 213 aa, chain + ## HITS:1 COG:mlr0535 KEGG:ns NR:ns ## COG: mlr0535 COG1309 # Protein_GI_number: 13470746 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 19 213 4 198 204 152 41.0 5e-37 MTNRHETDLVNEDTLKKKRGRPKCFDEQQVLEKAMLLFWEHGYEATSISDLTHALEITAP SLYSAFGDKAGLFYKSIDYYLAHEACPIETIFLEAKTAKIAFELYLYDNVKRLVQPNKPA GCMLVVAAMNCSDATQEVQQNLLDKRIKTKEKLLKRLEQGVEQGDLPTNAPLQEMTDFYA TVIQGLTIQARDGASTEQLHKVVEHAMKAWTLF >gi|333032490|gb|GL891936.1| GENE 116 126585 - 127505 678 306 aa, chain + ## HITS:1 COG:AGpA485 KEGG:ns NR:ns ## COG: AGpA485 COG0697 # Protein_GI_number: 16119566 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 299 12 299 309 223 45.0 3e-58 MSQVMKYHKWAFIFPILAVLIWSLNIVVTRYVSDYISPVSISFYRWLIAFIILTPFMFLS VWRQRRLVIPYLPKLAVLSAFGMVLYQGLAYTAAHYTSATNMGIVNAFIPIFTIFVSLAI LKDVPNRFAVFGSILSFAGLLYVMSQGNINKLLSGGGHLGDALMIIAVFFYAFYGVFLKK WQLPLPIMTSLYVQIGFSVLFHLPLIFWFGLDALNAQNAPSAIYAGVFASLIAPLVWMLA VQQLGPNRTSIFMNLVPVFTAIIASIWLSEQWTIYHTFGGIMILVGIIMAQKKVNSKKSD LLPEQN >gi|333032490|gb|GL891936.1| GENE 117 127897 - 128466 545 189 aa, chain - ## HITS:1 COG:PA0022 KEGG:ns NR:ns ## COG: PA0022 COG0009 # Protein_GI_number: 15595220 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Pseudomonas aeruginosa # 9 189 10 184 185 156 45.0 2e-38 MITTSVTEAAECLQQGQVLAYPTEAVWGLGCDPFNEQAFQKILELKQRPIEKGVILLAGH ISQVEHLLTSLPQTTQQEIIDCWTNHQPSERATTWLLPADQHIPSWIKGEHPLVAVRVTT HPLCVALCNAFHGFIVSTSANPSGQEPAHSLQDACQYFGSQLNYLNGDLGQSQQPSRIIN ALTGEVIRP >gi|333032490|gb|GL891936.1| GENE 118 128517 - 129647 868 376 aa, chain - ## HITS:1 COG:VC0048 KEGG:ns NR:ns ## COG: VC0048 COG0758 # Protein_GI_number: 15640080 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Vibrio cholerae # 47 373 42 367 371 213 42.0 7e-55 MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATRPDGLAKWSSLGLHANHLKR VNEFQTPQGQTQFEQLVQQVCQYTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQ PQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYGIDEAAHQGASTHQRTIAVTG TGLDTTYPAQNKKLAEYILAKNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQ WQSQQQNQTEEANTNTPEIPEHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELEL LGLCMQQSGLYLRCRS >gi|333032490|gb|GL891936.1| GENE 119 129668 - 130822 1258 384 aa, chain - ## HITS:1 COG:PA0020 KEGG:ns NR:ns ## COG: PA0020 COG1652 # Protein_GI_number: 15595218 # Func_class: S Function unknown # Function: Uncharacterized protein containing LysM domain # Organism: Pseudomonas aeruginosa # 49 380 23 341 341 226 37.0 4e-59 MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVK RGDTLWDISGHFLNKPWRWPEIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGC VGIIRRYTGQTTHLQPQVRVEALNNSVPVIPLEHIKQWLENSTILPADSITNTPYIVGTA DQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRA AKNSVVTLDRGTTQGIQVGQVFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLS YAFVLESDLPIKVGSSIQPPQFND >gi|333032490|gb|GL891936.1| GENE 120 130945 - 131475 690 176 aa, chain + ## HITS:1 COG:PA0019 KEGG:ns NR:ns ## COG: PA0019 COG0242 # Protein_GI_number: 15595217 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Pseudomonas aeruginosa # 1 167 1 167 168 215 67.0 4e-56 MALLPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQVDRHIQLIV MDLSESKDEPMVFINPKVTPLTEETQPYEEGCLSVPQIYDKVDRPSRVKIEAINLEGQAF EIEADGLLAVCIQHEMDHLNGKLFVDYLSPLKRQRAREKVEKIVRQREREKVAVKR >gi|333032490|gb|GL891936.1| GENE 121 131648 - 131938 202 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|239503031|ref|ZP_04662341.1| ## NR: gi|239503031|ref|ZP_04662341.1| hypothetical protein AbauAB_12034 [Acinetobacter baumannii AB900] # 1 96 1 96 98 180 98.0 3e-44 MQIEAAHVLAGVGKVAVAQSKHAGKLVDTRLSELVYEQAPLLRRIQVVKPNWHKRYNIDT DGSHHGDHDGQVLAPVRYDAGDVNGAWHVTWLPSVL >gi|333032490|gb|GL891936.1| GENE 122 132013 - 134127 2246 704 aa, chain + ## HITS:1 COG:PA3790 KEGG:ns NR:ns ## COG: PA3790 COG1629 # Protein_GI_number: 15598985 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 16 704 44 723 723 649 49.0 0 MPHSKFLLQPLWVAMLAVSHSGLVFAESEKNDAETNTLHSLAPIVVTAQQGNDANGLIVH ADPKQPIQPVPATDGADYLQSIMGFNSIQSGGTNGDVTFRGMFGSRIKILTDGTENLGAC PNRMDAPTSYISPESYDRISVIKGPQTVQYANTGSAATVLFERQPEKLTSEKPYRGQASV LLGSYGRIDHNIEAAVGDEKKYIRLNANRSESNSYQDGDGNTVPSAWKKWNADVALGFTP DENTWVEITGGKSDGESLYAGRSMDGSQFARESLGLRFEKKNITDVIKKIEGQVNYSYND HIMDNFSLRTPPLVEMNHGGMTMLMPNAMAMQVTRRTLNSRLAMTSEWNKWSLITGVDSQ FNKHGGSMSSPTMPSMNVPYRQDMRFQSYGAFGELGYQWNDQNKLVTGARLDRVTVEDER ADSQAKGFNTKLEKTLPSAFVRWENQHPEHDLKSYIGLGYVERMPDYWELFSPKHGNAGS TNTFNGVNPEKTLQLDLGFQQQHGALNTWASAYAGLVDDYILMSYHHHPSMGMDGHDMSH DITAGAKNVDATIAGAEAGIGYQFTDRIQADLSAMYAWGKNTTDDKPLPQISPLEGRLNI RYVADKYNLGLLWRAVAEQNRVSLHQGNIVGYDLKPSKGFSTLSLNGSYNLRKDIDVSVG IDNVLDKTYTEHLNKAGSAGFGFASEEQFNNIGRNYWVRMSMKF >gi|333032490|gb|GL891936.1| GENE 123 134181 - 134387 193 68 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_003351 NR:ns ## KEGG: ABBFA_003351 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 68 1 68 68 110 100.0 2e-23 MTNKLSPEQSWWGWKLLIVASILSVLFMIIFYLAINNEPDYMPSQKKKQMMESHEQMNHA EMHSSSAQ >gi|333032490|gb|GL891936.1| GENE 124 134457 - 135671 1186 404 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3701 NR:ns ## KEGG: ABAYE3701 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 404 1 404 404 793 98.0 0 MQMISPTRLASFNDMQDSNFFTQFLHICCGKPVQPNYKEYVSLQHALYEGDIEMDKVIDW VMQSPKDHRIIFEKILFQGRDELSELIPTELENFFNYIEQKPEWLDQRQIDEAVKFTHRL GINNGFILRDLSLMAGYLYPGFNQPLILTGALKKEAGTRLAETTKWWVDITEPQGLSRLS AGFTSTIYVRFIHALVRRQLKKSDRWDSEVWGIPLNQFDLAMTNLAFSSVVLLGIRALGI WPTKQEAKSFLHFWRYVGWLMGIDEKWLIQSEPEGWRLLYWMQFAHPRSDHSSIELGLSL SKEPFERKYLHLRSLQQKLAYRQHLELTQFFIGKKRMKLLGLPQQSASWFAYYLIVRNLL LYNGAKLSPKVEKFLSKSGRNIQKLGLTLYQNQGKAKTLASMHQ >gi|333032490|gb|GL891936.1| GENE 125 135759 - 136355 365 198 aa, chain + ## HITS:1 COG:PA1403 KEGG:ns NR:ns ## COG: PA1403 COG1309 # Protein_GI_number: 15596600 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 77 12 91 210 68 47.0 5e-12 MRKVPQQQRSKIIVDHILEATQQCIAQYGLLHTTTPKIAEKSGVSVGSIYQYFENKDQII EELLRRKSELLGQQLKELVVRQGNIPLELLIPLAIELGFNALKADHGFFIEVLKHWHDYS HSQAAQILEKHFFEVGLYTFSRNPHQWDFEQVKHKSFVIINSTLFTMMRYVSQNNFLISE QQLKRELSSMILAYLSQK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:33:32 2011 Seq name: gi|333032489|gb|GL891937.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld428, whole genome shotgun sequence Length of sequence - 43275 bp Number of predicted genes - 41, with homology - 41 Number of transcription units - 13, operones - 8 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.667 + CDS 54 - 653 768 ## COG0183 Acetyl-CoA acetyltransferase 2 1 Op 2 . + CDS 664 - 1443 736 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 1471 - 1512 0.6 + Prom 1494 - 1553 8.2 3 2 Tu 1 . + CDS 1704 - 4166 2595 ## COG2366 Protein related to penicillin acylase + Term 4198 - 4242 10.2 - Term 4185 - 4228 6.2 4 3 Op 1 . - CDS 4238 - 5725 1491 ## COG1012 NAD-dependent aldehyde dehydrogenases 5 3 Op 2 . - CDS 5757 - 7034 1104 ## ACICU_01965 hypothetical protein 6 3 Op 3 . - CDS 7117 - 9423 2124 ## COG3733 Cu2+-containing amine oxidase - Prom 9525 - 9584 3.4 - Term 9487 - 9542 4.4 7 4 Tu 1 . - CDS 9641 - 10555 837 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 10685 - 10744 3.5 - Term 10703 - 10743 6.0 8 5 Op 1 1/0.667 - CDS 10754 - 11707 641 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 9 5 Op 2 . - CDS 11756 - 12709 903 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 10 5 Op 3 . - CDS 12744 - 13481 229 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 11 5 Op 4 . - CDS 13492 - 13971 563 ## ACICU_01971 aromatic-ring-hydroxylating dioxygenase subunit beta 12 5 Op 5 . - CDS 13988 - 15265 1609 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit 13 5 Op 6 . - CDS 15295 - 15822 393 ## ACICU_01973 hypothetical protein 14 5 Op 7 . - CDS 15833 - 16192 367 ## ABBFA_001590 hypothetical protein 15 5 Op 8 . - CDS 16221 - 17387 1318 ## COG1960 Acyl-CoA dehydrogenases 16 5 Op 9 . - CDS 17406 - 18515 989 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases - Prom 18540 - 18599 9.4 + Prom 18499 - 18558 5.9 17 6 Tu 1 . + CDS 18590 - 19132 372 ## ACICU_01977 MarR family multidrug resistance pump transcriptional regulator - Term 19199 - 19256 1.1 18 7 Tu 1 . - CDS 19299 - 19448 70 ## ABBFA_001586 hypothetical protein + Prom 19307 - 19366 7.4 19 8 Op 1 . + CDS 19545 - 20894 1235 ## COG0477 Permeases of the major facilitator superfamily + Prom 20910 - 20969 3.0 20 8 Op 2 . + CDS 21011 - 22303 929 ## ACICU_01979 putative benzoate transport BenP + Term 22311 - 22346 6.0 - Term 22299 - 22334 6.0 21 9 Op 1 3/0.333 - CDS 22339 - 23082 256 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 22 9 Op 2 2/0.333 - CDS 23098 - 23796 693 ## COG0406 Fructose-2,6-bisphosphatase 23 9 Op 3 . - CDS 23793 - 24914 1133 ## COG3173 Predicted aminoglycoside phosphotransferase 24 9 Op 4 . - CDS 24932 - 26173 1360 ## COG1960 Acyl-CoA dehydrogenases - Prom 26203 - 26262 4.4 + Prom 26179 - 26238 5.6 25 10 Op 1 1/0.667 + CDS 26262 - 27182 652 ## COG0583 Transcriptional regulator 26 10 Op 2 . + CDS 27225 - 28037 837 ## COG1414 Transcriptional regulator + Term 28189 - 28226 1.9 - Term 27929 - 27973 0.9 27 11 Op 1 1/0.667 - CDS 28091 - 28957 817 ## COG0491 Zn-dependent hydrolases, including glyoxylases 28 11 Op 2 8/0.000 - CDS 28962 - 29393 413 ## COG2391 Predicted transporter component 29 11 Op 3 . - CDS 29380 - 29793 321 ## COG2391 Predicted transporter component - Prom 29824 - 29883 5.9 - Term 29891 - 29920 0.5 30 12 Tu 1 . - CDS 29929 - 30396 609 ## ABAYE1686 signal peptide - Prom 30419 - 30478 7.4 - Term 30973 - 31025 9.2 31 13 Op 1 1/0.667 - CDS 31027 - 33456 2567 ## COG4993 Glucose dehydrogenase 32 13 Op 2 . - CDS 33539 - 34858 1427 ## COG3659 Carbohydrate-selective porin 33 13 Op 3 . - CDS 34918 - 36369 1778 ## ACICU_01992 putative 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase) (EC:4.2.1.-) 34 13 Op 4 . - CDS 36389 - 37222 978 ## COG0710 3-dehydroquinate dehydratase - Term 37226 - 37273 0.2 35 13 Op 5 8/0.000 - CDS 37285 - 37914 961 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit 36 13 Op 6 4/0.333 - CDS 37929 - 38654 899 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit 37 13 Op 7 3/0.333 - CDS 38665 - 39078 583 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 38 13 Op 8 8/0.000 - CDS 39094 - 40449 1479 ## COG0477 Permeases of the major facilitator superfamily 39 13 Op 9 3/0.333 - CDS 40492 - 41277 202 ## PROTEIN SUPPORTED gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 40 13 Op 10 2/0.333 - CDS 41274 - 42629 1338 ## COG0015 Adenylosuccinate lyase 41 13 Op 11 . - CDS 42632 - 43222 748 ## COG0183 Acetyl-CoA acetyltransferase Predicted protein(s) >gi|333032489|gb|GL891937.1| GENE 1 54 - 653 768 199 aa, chain + ## HITS:1 COG:RSc2252 KEGG:ns NR:ns ## COG: RSc2252 COG0183 # Protein_GI_number: 17546971 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 3 196 208 400 400 251 70.0 5e-67 MAVEIPQRKGDAVVIDTDEHPRASTTLEGLSKLKPVVKADGTVTAGNASGINDGAAALLI ASDEAVQAYNLKPRAKIIASTAVGVEPRIMGFAPAPAIKKLLKQVNLTLEQMDVIELNEA FAAQALAVTRDLGLPDNSDKVNPNGGAIALGHPLGASGARLVTTALNQLEQTGGRYALCS MCIGVGQGIALIIERVEAL >gi|333032489|gb|GL891937.1| GENE 2 664 - 1443 736 259 aa, chain + ## HITS:1 COG:PA0231 KEGG:ns NR:ns ## COG: PA0231 COG0596 # Protein_GI_number: 15595428 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 1 258 1 261 263 235 44.0 5e-62 MPSFQSADAQINYQTFGEPSSPALVFSNSLGTNYGMWQKQFNELKDQFFVICYDTRGHGS SSTPDGPYTVEQLGEDVVRLLDHLNISKAAFCGISMGGLTGQWLAIHCPNRFSHIIVANT AAKIGQEQAWLDRAKLVREQGLQPIAATAASRWFTDPFIQSHPSIVNNLCNDLSAGSAMG YANCCEALAKADVREQLKDIKIPVLLIAGTQDPVTTVADGQFMQQRIPQAKIAEINASHI SNVEQPEAFNKILKDFLLG >gi|333032489|gb|GL891937.1| GENE 3 1704 - 4166 2595 820 aa, chain + ## HITS:1 COG:all3924 KEGG:ns NR:ns ## COG: all3924 COG2366 # Protein_GI_number: 17231416 # Func_class: R General function prediction only # Function: Protein related to penicillin acylase # Organism: Nostoc sp. PCC 7120 # 39 714 58 723 847 172 24.0 2e-42 MLNSRPHPTRPLIKYGTLLLGALLAGCNSSSSLDPTPTQKQITIKRDKFGTPHVYANDTY GLFYGYGYSVATDRLFQMEMSKRTGQGTVAEVLGPDYLQYDIATHSRFDPENIKQQLAAL SPEDRAIFEGYAAGFNKRVKEVLADPALMPKEFTDHDFKPSTWQPEDIAMVWVGLILNRF FSASSEVTNLDLLTQLQKEKGQEEGLKVYQQLRWLDDPSAPTIIQSAQKTQLLAHQQQIL KDISPISNKAAKTYLAQARIALGKSVVDGVPTASNAWVLKGDKTIEGQAVLYNGPQQGWY TPAITYAIGLHGAGYNLTGITPVGLPAILFGTNGKIAWGSTVGSLDTNDVYQLTLNPSNS KEYLYKGVYIPFEHKQVKIKVKNQADHVLDVYKSKQGFVSTWDENNHTAYAQKRSWEGVE IETLLGWANAAKASNWDEFLAQAKRVAASITWFYADTKDNIGVAALGRLPIRPENQHIQL PAKGDGSMEWQGFYDFSHNPKEYNPQKGYVTSWNNKAYAGLRSDSSNFSYVDRVNELIEP LESKAKLSQQEIWEINKTAAWSDLNARYFVPYMVKAAQSPKATPLAKKVAPLLASWDLKL RPDSEAKYYQGAAPAITRTWLNQMIELVLKPNLSENIYKRYTDTLYPVNNDPRSAQPASA SKLIWNALQGKQASVPQNVDFLKGQTADEVVLKALENALTELSNQYHSTDPNDWKIPVAT MGFSSKNSVGIPWADPSHEQHLSTYGNTGSATFRVVLNPNQVTMCSILAPGQSGFINQNG KPDAHFADQLSLFESYKCKDDAVSQKEIDQSTQQSITLNY >gi|333032489|gb|GL891937.1| GENE 4 4238 - 5725 1491 495 aa, chain - ## HITS:1 COG:STM3129 KEGG:ns NR:ns ## COG: STM3129 COG1012 # Protein_GI_number: 16766429 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Salmonella typhimurium LT2 # 1 495 1 494 494 478 50.0 1e-134 MSEVQILQSVQQFMARQHGHFIDGKLVAAELLDKVDIVNPSTEQVVAQISIGSQQDVASA VKSAEHAFQNAWAETTPYERGVKLNKLADLIEQHGEELAQLETLSTGKLINISRHLEVAQ SVIFLRYFAGWATKINGQTIQPSIPSMQGEKYTAFTLRQPIGVVAGIVPWNFSLMIGVWK IGSALTTGCTIVLKPSEFASLSLLRLAELAIEAGIPAGVINVVTGKGETGQYLIESPLVK KVSFTGSVPTGIAIGKLAMSSDLTRVSLELGGKNAIAVLADANIDEILPTLLQATFVHQG QVCASPERFFVHRTKYDELVGKLSKALSQFKIGSAMDEGSMFGPLSNQPHFHKVKHYLDM AKANNQIIAGGEALDQTGYFVQPTLISFKNTDDPLFSEETFGPVVGVMPFETDEELIQLM NQSRFGLTASIWTNDLSKALGLIPKIEAGTLWVNMHTFLDPSVPFGGVKASGIGREFSDA FIEDYTELKSVMIRY >gi|333032489|gb|GL891937.1| GENE 5 5757 - 7034 1104 425 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01965 NR:ns ## KEGG: ACICU_01965 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 425 1 425 425 816 100.0 0 MKNLFSQVMRGTFFVSFFSTVHASELEIKPTFEATFGAFSSGKSYNGENLHDERINWQEG HLKYGAKGQYTFKSNQLYASLSGISSATFGDGDAGQNSNGKERKTDVNEWVIGFKDGTNK DELKTYDLSIGRQNIMIGDGFFIAGDALNLGKAPADGTLDRGGAYYLAARRSFDFTSLLQ YKPQENTTLKLAYLKSDNKAQFSPELFVTDLMYQLKDKGVGFTYLNVLDLTDAEHVSGRE DLKNYALRLNYQPLPELQVKTEFVVQDKKDGQENAGYLALNYNFLSSKYTPSLGYRFSHF SDQYDPMFYGNTVGFGTWFQGEVAGNYAGPFNKNADIHQVSYMMNLKENFMLGALAYKFK TVNKSLANVDGHELDVFSVWSVNKKFNVIPLVGLYKPKHDIHSGGTQNYDDKTNVYAQLI LQYIY >gi|333032489|gb|GL891937.1| GENE 6 7117 - 9423 2124 768 aa, chain - ## HITS:1 COG:tynA KEGG:ns NR:ns ## COG: tynA COG3733 # Protein_GI_number: 16129347 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Cu2+-containing amine oxidase # Organism: Escherichia coli K12 # 16 754 14 750 757 993 63.0 0 MRKQRLLNDIQKILALNLSIAASFWGLNTQAFAHGGKAEMVSLYQNMSEQGAKVVKDDFT NTYMITKGSMVVRAKPNSDQVLVNGKPFKLSVPLLIKDGKPVIGKDFFNEVFQSGLDQTF KIENTFHPLNSLNSDEIKKTFDVINRSKYAYKNMRFAELKLKEPEKAKVWDYFINHKDFK EDRIASFILLKGNQAIEGEVNLNTQQVTKWNVLKDTHGMVLLDNFEAVQRVIETSKEYQD ALRKRGITDVKKVIATPLTVGYFGGKDGLDKQLNILKVVAYLDVGDGNYWAHPIENLVAV VDLDKEKIIKIEEGAIIPVPMANRPYMSNKPVASKLKPLNIIEPEGKNFSITGQTIHWGN WCLHVALDSRVGLQLSTVTYKDKGVKRKVMYEGNLGGMVVPYGDPDIGWYFKSYLDSGEY GMGTLTSSILPGTDAPDNAVLLDAVIADYKGQPQVIPNAIAVFERYAGPEYKHHEIFGNQ DASEARRELVVRWISTVGNYDYMFDWVFSQNGVIGINAGATGIEAVKGVKARTMHDSTAK EDTKYGTLIDHNIVGTTHQHIYNFRLDMDVDGENNSFMHMDPVVKANDKGGVRTSSMQID SKVITNEQNAAEKFDPSTIRLLTNFNKENKLGNPVSYQLIPFAGGTHPVAKGANFSKDEW LFKRLNFMDKQIWVTQYNPDERYPEGKYSNRSTHDTGLGQFIGNNENIENKDLVVWMTTG TTHVARAEEWPIMPTEWVYTLIKPWNFFDNTPTLNLGEEEQSTQHDHH >gi|333032489|gb|GL891937.1| GENE 7 9641 - 10555 837 304 aa, chain - ## HITS:1 COG:PA4070 KEGG:ns NR:ns ## COG: PA4070 COG2207 # Protein_GI_number: 15599265 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 12 301 14 312 316 209 37.0 7e-54 MNQYVSDALLTWTHHIKNVCGNFETDFDGTRNLFIGEVQCFLLGDTEIAFIKNNANKIVR KADEIDRVNNRFCFLILQYSGKMLLEYKNETLSLNEGDIVLVDPVETISMYPQGLVSQIS VHLSREKLLKENISTEYFGKLITQNMSGFLLKNILKNMSAENIKLWYATEDGNAFEDALI ALIKPTINYKNINSPNNLMEKAERYIIENLAKPDLTPKLIAEHIGVSLRHLYRLFLQENL SINKYIQLKRLEKVKADLLDKRNKQSSITQIALKWGFWDGAHFSKIFKKTYGISPKEFRE GMSV >gi|333032489|gb|GL891937.1| GENE 8 10754 - 11707 641 317 aa, chain - ## HITS:1 COG:SMa0793 KEGG:ns NR:ns ## COG: SMa0793 COG1853 # Protein_GI_number: 16262882 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Sinorhizobium meliloti # 13 162 16 165 320 142 47.0 6e-34 MNVLQQIDEFTVDPLQFRRALGNFATGVTIVTAQNAQGEKVGVTANSFNSVSLDPPLILW SIDKKSSSFSVFEEATHFAVNILSGTQIELSNRFSRRNIDKFTDTNFQLGAGRAPILENC SAVFECERYQVIEGGDHWIIIGKVVRFHDQGRSPLVYHQGAYSCVMPHPSLQVKQTEQSS VDQTHYGHLYNNVCYLMSRAFKAYQTDYIPKQMASGFRTSESRLLLVLASGTASSKEDLP RDIAMPMQEVERSAEILKFEGLLVDHDNLYALTEKGKQTAQYLFDIADSHQNEVFKKYSD EQKDIFITMLRDFAGVA >gi|333032489|gb|GL891937.1| GENE 9 11756 - 12709 903 317 aa, chain - ## HITS:1 COG:PA4905 KEGG:ns NR:ns ## COG: PA4905 COG1018 # Protein_GI_number: 15600098 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Pseudomonas aeruginosa # 4 317 1 317 317 279 43.0 5e-75 MTTLYDVVVKNRHVEGGNIAVMEFESATSAALPKVEPGAHIDVHLPNGMVRQYSLCQNPN DEGKFRLGILRDPESRGGSISAFDEIKDGMQIQVSEPKNLFPLLKAKHSVLIGGGIGITP LITMAYQLAHEGASFELHYCGASPEKCAFVDEIKNGVLAQYTTFHFKSEGASHRAFFESA IKDIDPESHIYTCGPVGFMDWVINLATTHDFPEQQIHKEYFQVETDTSGDSFEVVAERSG KIIMVEAGETILQALAKEGIEIEMSCEQGVCGTCMCDVIEGEPDHRDVYFTDEEKASNEQ ILVCCSRSKTPRLVLDI >gi|333032489|gb|GL891937.1| GENE 10 12744 - 13481 229 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 2 240 3 238 242 92 29 3e-18 MKQVVLVTGAASGLGNVIAEYFASQGHQVILSASTLEKAENAKAQSQYAQNIFPLKLDIS VEADFHAAVQWIEEKFSKLDVLINNATVTKATPVLEITAADFDWVTQVNQRGTFQACQII GQYMAKKGYGRIINMASLAGQNGGTATGAHYAATKGAIVTLTKIFAKEFAAKGVTVNAIA PGPMESPIVHSVVPDEKMEQFIQNIPVKALGSMHFIAETCGLLASPNASFVTGATWDING GLFMR >gi|333032489|gb|GL891937.1| GENE 11 13492 - 13971 563 159 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01971 NR:ns ## KEGG: ACICU_01971 # Name: not_defined # Def: aromatic-ring-hydroxylating dioxygenase subunit beta # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 159 1 159 159 295 100.0 5e-79 MNLQLLNEVTAFIWAEADMLDHSEYREWLNLWNEKGIYIIPIDPNLTDYENNLNYAYDDN HMRKLRVERLENGEAISTAPKANTVRSISRVRVIQDQDDEIVLRCAQNLREFRKENLKHY TADITYHLTRDADTGFKINRKIINLVNSTDTLAGISYIL >gi|333032489|gb|GL891937.1| GENE 12 13988 - 15265 1609 425 aa, chain - ## HITS:1 COG:PA2518 KEGG:ns NR:ns ## COG: PA2518 COG4638 # Protein_GI_number: 15597714 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Pseudomonas aeruginosa # 9 391 2 393 455 186 31.0 8e-47 MNSIIPTHNIGIDYDALVKSDRAHTSLYKDERIFDEEMEKIFYSTWVWVAHASEIPEAGS YKTINIGKQPVVVVRDRKKKVHVLLNRCRHRAATVCEHKKGKTNSFVCPYHGWSYALDGS LRGVPSPESYGDCLDKSELPLVSLRVEEYNGMIFASFKEDIQPLEEFLGPAKKWIDLFMK QGAGYPIKVLGEHRFRFPGNWKIQLENTTDAYHFPLVHKSFLSSVDEKTEELFNFENQPG FVEDLGNGHSVMVMIPELVNLEEDLMERPIQERFEDLAQALRDEGHEELEVRRIVRAVGG SGFNLNLFPNIACSMAFFRVLQPISVAETEIHHSVITMDGGPQIANQYRLRLHEHFQGPF GFGTPDDSEAWERVQHGANAGNDLWIMLNRGLPGEVKTEDGLKSDVSAETGMRAAYQQWK KMMTA >gi|333032489|gb|GL891937.1| GENE 13 15295 - 15822 393 175 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01973 NR:ns ## KEGG: ACICU_01973 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 175 1 175 175 342 100.0 6e-93 MTDKVNIAEIIERLERLEAHNAIRNCINRYMEICDELNANTDLYELMNLFDQDCIWEGIG DKYSKSFGRYDSWQSIYDMFKRYTQKESHFVMNAHFVNSEQIYVNQNDANALWLMLQTST FQDGRSHLNAAKLKVKFQKQADGTWKIKHFQTQNIFSRPVSHWHSEAELPVPSQE >gi|333032489|gb|GL891937.1| GENE 14 15833 - 16192 367 119 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001590 NR:ns ## KEGG: ABBFA_001590 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 119 1 119 119 252 100.0 4e-66 MEAKKPLRVLFCMGINQNFFDAEPAEAKAVWAAFGEMWNGIHDLPGVHVFGNLDDDQSMV GASTGWPWTTYLLADVPDIETVHAACNLFRTTVVGEGPYKLWKYCKVEARVGRELIIQR >gi|333032489|gb|GL891937.1| GENE 15 16221 - 17387 1318 388 aa, chain - ## HITS:1 COG:RSp0219 KEGG:ns NR:ns ## COG: RSp0219 COG1960 # Protein_GI_number: 17548440 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 29 375 22 380 393 148 29.0 1e-35 MNKLSKMEFASQDKAVDLDALCQEIRERACAGEFDNQAYVSQDIIEKLKKIGVYRALVPK RFGGEEWSPRQFCELIETLSKADGSVGWVASFGMSPAYLGSLPEETLKELYQNGPDVVFA GGIFPPQPAEITDEGVVVRGRWKFSSGCMGADIVGVGISPLKNNEMQGLPRMAVMPANKA KIEMTWDTVGLKGTGSHDLVVEDVLVEKKWTFVRGEPSKLSEPFFKYPSLSLATQVLTVV GIGVAAAALEEFEKLAPGKASITGGSEIANRPVTQYEFAQADAEFQAAKSWFYQTMDIVW NEIIAGREATAEQISDMRLACTHAARVCAKVTRKMQMLAGMTAIYTNNPFSRFVNDTNVV TQHAFMGDATLQNAGLVSFGLKPTPGYL >gi|333032489|gb|GL891937.1| GENE 16 17406 - 18515 989 369 aa, chain - ## HITS:1 COG:MA4523 KEGG:ns NR:ns ## COG: MA4523 COG0154 # Protein_GI_number: 20093308 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Methanosarcina acetivorans str.C2A # 17 350 67 447 476 174 34.0 4e-43 MNIISQSVQKGSGKLKVMVKDTIDIQGLKTIAGSKALLEVEPAHDDAEVVKNILKADCEI IGKTNLHELAFGITGINHAFGTPINPKYPELIPGGSSSGSAAAVAAKQADFTLGTDTGGS IRMPAACCGVFGLKPTFGRVSREGVYPPSSSLDCVGPFANSVEMIEKAMQIIDPTFKPAE CTRTPKLALLNVKADEVVWNCIYQALQKANLETVLEKVEHFEAAYDAGMQIINYENWQAF GELTQTGLIGSDVNNRLLKAAQTTLEQVKQAEVVKAQLTEELDALLEKYDALVLPTLPQI PPKVSEAENTVAFLNLTGLVRPFNLSGHPAISVPLETSEGLPVGLQIVSKHQKDEQLCAI AKFCVDAMQ >gi|333032489|gb|GL891937.1| GENE 17 18590 - 19132 372 180 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01977 NR:ns ## KEGG: ACICU_01977 # Name: not_defined # Def: MarR family multidrug resistance pump transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 180 1 180 180 337 100.0 1e-91 MCVQGNMQNFVYNRITLFLLSYCLAMLDHLEQFLPNKEPSSIQNFPFFWISQVNGKYSQL IEKSIKKLGIDNTRRKIILSTNALGEASITDIANLSTLKLTTATKAVYRLVEDGIVEVYS STADERISMVKLTAKGVELVEQINQISVVTLAGILNAFSEDELHNLNHQLKKLFDLMPSS >gi|333032489|gb|GL891937.1| GENE 18 19299 - 19448 70 49 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_001586 NR:ns ## KEGG: ABBFA_001586 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 6 49 1 44 44 65 95.0 8e-10 MKRLEMIEFGLVRGLGEGDLTQTEIVMLTKLLNYYFLFICKIPLLVEYV >gi|333032489|gb|GL891937.1| GENE 19 19545 - 20894 1235 449 aa, chain + ## HITS:1 COG:PA4654 KEGG:ns NR:ns ## COG: PA4654 COG0477 # Protein_GI_number: 15599849 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 15 444 10 433 457 295 38.0 2e-79 MNQSNIAVERTQKKTNAYAWYVVILCMLAYIFSFIDRQILALMIEPIKADLQLSDTQFSL LHGLAFSLFYAVMGLPLAYIADRFSRPKLISIGIIVWSLATATCGLSKNFIQLFLSRMAV GVGEAALSPAAYSMFSDMFSKDKLGRAVGIYSIGAFLGGGIAFLVGGYVINLLKGVTLIE VPLLGALKAWQIAFLVVGLPGIIIGLLFILTVKDPARKGQQLNQSGQVDQVKFTQCLQFI KKHAKTFACHYLGFTFYAMALYSLTSWTPAFYIRKFQLAPTETGYMLGTILLVANTLGVF CAGWLNDWFIKKGRQDAPMFTGVIGIVGLIIPIAFFTQTDQLWLSVTLLIPAMFFASFPL VISATALQMLAPNQFRARLSALFLLVSNLIGLGVGTTLVAIITDKFFGNPLMVGSSLSIV GGLSCVLALALLFKGCKSFSESMKLEKLH >gi|333032489|gb|GL891937.1| GENE 20 21011 - 22303 929 430 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01979 NR:ns ## KEGG: ACICU_01979 # Name: not_defined # Def: putative benzoate transport BenP # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 430 1 418 418 815 97.0 0 MELFHRFKPHTLAVATLFIMCSSSWAANPNQQTEDEWKFTLKNAYINRDFDNDVLKDTGS WSQAASLFYKSKMHDTPLVIADKPITIGADASVQYAVRLSSDKHVADTVLPFNKETQSQA SDYLKYGATLKIGYDKTLLSVGELWLDLPVTAVDASRQLLTSYWGTNLKSQLSDQLYAEI GRVEKVSPRNEEDFKKFSFTANGMTKESDGLNYIDLRYQFTPSLKGEYYFGNLEDLYNKH YVGLEPPPHNKHYVGLEHTWKQPTFALTSKFKYFNAKDDGNTFDIDAQNIGLLETVKIKN HTFGLGYQQIIGESAYPLPDGFLPETYFINWNATGFFKEDEKSYHVMYGYDFKDYVPGLN AMVKYVYGHDFKAANGEKNHETESNVILNYTFQQPLLKGFALQYIRIDYNVKHGNDFGED RLFVNYTKKF >gi|333032489|gb|GL891937.1| GENE 21 22339 - 23082 256 247 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 239 3 240 259 103 31 2e-21 MAKTILITGASSGLGAGMAHEFAAKGYNLAICARRLDRLETLKTELENQYGIKVIAKSLD VTNYDQVFEVFRAFKQEFGYLDRIIVNAGVGNGRRIGKGNFEINRATAETNFISALAQCE AAIEIFRAQNAGHLVVMSSMSAMRGLPKHLSTYAASKAAVAHLAEGIRAELLDTPIKVST IFPGYIRTEMNEGAKHLPFEVDAKTGCKALVKAIEKQPVKAYVPQWPWLPMSIAMKVLPL RLVNKLG >gi|333032489|gb|GL891937.1| GENE 22 23098 - 23796 693 232 aa, chain - ## HITS:1 COG:PA1831 KEGG:ns NR:ns ## COG: PA1831 COG0406 # Protein_GI_number: 15597028 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Pseudomonas aeruginosa # 1 231 1 235 236 129 36.0 3e-30 MTTIYLVRHGQASFGKSNYDELSENGEAQATLLGQYFKQILKEQPYVVAGTMQRHEQTAK LALNECFPDAVIHHNNLWNEFNHQQVFARYEPRFEQPELLKADVAKEHNPRAYLAKIFEG AIERWTDGDFHHEYDESWPHFKERVETALQQLCDELAKNKPRYAVVFTSGGVISVAIGKL LELSPNRTFALNWAITNTSLTTLRLVGNEAQVLSLNEHHFIKAERPDLLTWI >gi|333032489|gb|GL891937.1| GENE 23 23793 - 24914 1133 373 aa, chain - ## HITS:1 COG:PA1829 KEGG:ns NR:ns ## COG: PA1829 COG3173 # Protein_GI_number: 15597026 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Pseudomonas aeruginosa # 1 358 1 352 356 366 50.0 1e-101 MSVIDVGGEVREGEELDIGAVENWLKNQGVELVGPAVVTQYTGGASNWTYRLKYENTDLI LRRPPKGTKAKSAHDMAREYMVQKNLAPYYPVLPKMVALCQDESVIGCDFYVMERIEGII PRAKLPPELGFNEDDVHELCVNVIDKLIELHQVPYENTPLAELGKGTGYCRRQVEGWDKR YEKVRTINVPSFKYVRKWLNDNIPQDSTTCIIHNDWRFDNVILDPEHPTEVIGVLDWEMA TLGDPLMDLGSALAYWVEPTDNMIFRSTRRQPTHLKGMFSRKEVVDYYLQKTGLEPQNWT FYEVFGVFRLAVIAQQIYYRYYHKQTRNPAFKDFWIVIHALHIRALKLIAQQKLQESEFA QQSLQKIQGILRR >gi|333032489|gb|GL891937.1| GENE 24 24932 - 26173 1360 413 aa, chain - ## HITS:1 COG:PA2550 KEGG:ns NR:ns ## COG: PA2550 COG1960 # Protein_GI_number: 15597746 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 2 404 3 398 409 491 61.0 1e-139 MFELSKKAQDFAERTKKFIQEEIEPVEAKFWEEVHELNPDGNWKKWQWPELLETLKSKAK QAGLWNMFLPDEKLGAGLSVQEYAHIAELTGRSLLAPTVFNCNAPDTGNMEVLWRYGSEQ QKQQWLEPLLDGKIRSVFCMTEPDVASSDATNMQATALIDGNEIVLNGKKWWSSGLGDPN AKVIIFMAHTPDETKDRHYQHSMVLVPIDTAGVEIQRMLPVFGDYDAPHGHGEVHFNNVR VPIENFIGGAGQGFEIAQGRLGPGRIHHCMRCIGAAEKALELMIDRGMSRTAFGKEILKL GGNLERVADARVAIDQARLLTLYAAYKMDTLGNMAALTEISAIKVVAPSVLEKVVDMAIQ LHGGAGVSRDTPLTGFFAQARSLRLADGPDEVHKGMIAKLELAKRGYGRHKKV >gi|333032489|gb|GL891937.1| GENE 25 26262 - 27182 652 306 aa, chain + ## HITS:1 COG:PA1399 KEGG:ns NR:ns ## COG: PA1399 COG0583 # Protein_GI_number: 15596596 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 304 1 301 306 141 27.0 1e-33 MNNIHNLHGLDLSFFHRIDINLYPLFIAIYEQKSISNAASSLNITQSAASHALQRLRQQL EDEVFIRVGNKMSATPFAEQIYPTVKQALLTIQNISQQRHVFDPTSLKSLKIAVHDEIEP IILPRLAQHFQNLNLDLQFVSMKLDRKHIMADLATQQLDFVIDLEQYLSPKITFDHLVTD EFVICSQLKEVDLASYISGRHIGVSSRRTGALLEDIYLNQHQKISRNVFMRCQNYSTALQ VLGAQADAILTMPRMILQHLSYSPEIRLHSLPFEMTNIKMGMFWHEDLRDNLRHQFLRHE IIKLFQ >gi|333032489|gb|GL891937.1| GENE 26 27225 - 28037 837 270 aa, chain + ## HITS:1 COG:BMEII0642 KEGG:ns NR:ns ## COG: BMEII0642 COG1414 # Protein_GI_number: 17988987 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 17 270 1 250 256 168 37.0 9e-42 MSKDERIIQNQDNKKTIRHEDYIAGIGKGMAILDSFSSNQHRLNISMAAEKTGLTRAAAR RHLLTLEYLGYLESDGHYYYLTPKVLKFSGAYLGAAQLPKVSQPLLNLLTNQTSLIYSVM VLDGYEAITIARSAAHQQTDRVNPYGLHLGNRLPAHATSAGKILLAHLSQEEQLDWLQKY PLQRLTKYTHVENDKFLELLKEIREQDWCYSREEHELGVHALAVPIYGQDFKVVAALNIV SPTMRTTEEYLIQHILPLLQETARDLRQVL >gi|333032489|gb|GL891937.1| GENE 27 28091 - 28957 817 288 aa, chain - ## HITS:1 COG:PA2915 KEGG:ns NR:ns ## COG: PA2915 COG0491 # Protein_GI_number: 15598111 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pseudomonas aeruginosa # 1 288 1 288 288 345 51.0 8e-95 MQQPLVKDFFDENTNTFSYVVADLATRQCAIIDSVLDYDAASATTKTTNADLIVDYVLAQ NFKVQWILETHVHADHMTAAQYLKSKLGGTIAISQKISVVQETFSAIYNFDFKKFNENQP FDYLFEDYEHFKIGEIDAYNIPTPGHTPACLSYVIGDAVFVGDTLFMPDYGSARCDFPKG SAAALYDSVQKLYTLPDDMRMFLCHDYKPEGRDEYICQTDIKTQKQSNIHLNRRVSKESF IKMRQERDATLAMPKLILPSIQINMNGGNFPEPEANGIRYLKIPFNYF >gi|333032489|gb|GL891937.1| GENE 28 28962 - 29393 413 143 aa, chain - ## HITS:1 COG:VCA0640 KEGG:ns NR:ns ## COG: VCA0640 COG2391 # Protein_GI_number: 15601398 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Vibrio cholerae # 1 133 1 134 154 110 47.0 1e-24 MCWGNLMKNIFAFIFGGLFSLGLMISGMSNPAKVLGFLDIFGQWDISLMFVMLGAIAVAF IPFQRAIKKPKTIFNEQIQLPTNTQIDQRLIVGAFIFGIGWGIAGICPAPALTLIGLGHF EALYFIVAMLVGMFIYRILNKGN >gi|333032489|gb|GL891937.1| GENE 29 29380 - 29793 321 137 aa, chain - ## HITS:1 COG:XF0766 KEGG:ns NR:ns ## COG: XF0766 COG2391 # Protein_GI_number: 15837368 # Func_class: R General function prediction only # Function: Predicted transporter component # Organism: Xylella fastidiosa 9a5c # 1 128 1 127 135 95 45.0 3e-20 MSSIVYAFVGGLLLGIATVGYLYINGRIAGISGLLAQFISPSRDIFKSSAFWFIAGLVIT PFIYGYFYQPEIEIKANSFVLILAGLLVGFGTRLGSGCTSGHGICGMSRLSKRSIIATAV FMFAGMLTVYIIRHVLG >gi|333032489|gb|GL891937.1| GENE 30 29929 - 30396 609 155 aa, chain - ## HITS:1 COG:no KEGG:ABAYE1686 NR:ns ## KEGG: ABAYE1686 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 155 8 162 162 303 100.0 2e-81 MRFLVLATLSGLALMGCASVQQAPNTQETIRYASSPCFGACPIYSVEVTPTGLIRFEGKQ YTKAIGVKEIQGSVKDYQKLADELKTYRPQTGTQSKTAGCQQTATDMPSYYITWIQPNGT ETKLSHYTGCISPANNRLNKVMEKLPEQLGIKDLI >gi|333032489|gb|GL891937.1| GENE 31 31027 - 33456 2567 809 aa, chain - ## HITS:1 COG:AGl2936 KEGG:ns NR:ns ## COG: AGl2936 COG4993 # Protein_GI_number: 15891579 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 13 807 13 807 809 1018 63.0 0 MSESDSKFHILFKIWCFILGLALLATGIFYIVGGGKLVSLGGSWYFLISGLFITISAISI FRKKALGVWIFAAVFVGTVIWSLIDAGWEFWPLFSRLMFPAGLFAALLFTLPSIRRYQFQ TSLASSAYAVGGLVVVGMLIALYQMFQPHPTVASSGEKLPLVPVDPSKKQVNWENYGNDA GGSRFVALDQINRDNVHKLKEAWRFRTGDFTTGSGNGAEDQMTPLQVGNKVFLCTPHNNI FAIDADSGKQLWKAEVNSTADAWERCRGVAYFDSTKPLVQPTLAGATPVNTVASNTACPR RVYTNTPDGRLIAVNADNGQRCADFGVNGTVDLLEGLGGGTKAPRFEVTSAPTIAGTTIV VGSRIADNVAADMPGGVIRGYDVITGKLRWAFDPRNPDPNYVLKPGETYKRSSANSWAAM SYDPQMNTVFLPMGSSSVDIWGGNRNPLDHKYNTSVLALDATTGKEKWVYQTVHNDLWDF DLPMQPSLVDFPLKDGTTKPAVVIGTKSGQFFVLDRVTGKPLTKVIEQPVKAANIPGEQY SLTQPRSVEMPQIGNQTLTESDMWGATPFDQLMCRINFKSMRYEGLFTAPGTDVSLSFPG SLGGMNWGSIAFDPTHRYMFVNDMRLGLWVQLIKQTPEDIKIQASGGEKVNTGMGAVPMK GTPYKVNKNRFMSALSIPCQKPPFGTMTAIDMKTRQVAWQVPLGTVEDTGPLGIKMGLKA PIGMPTIGGPMATQGGLVFFAATQDYYLRAFDSSTGKELWKSRMPVGSQGTPISYVSPKT GKQYVVVTAGGARQSPDHGDYVIAYSLEK >gi|333032489|gb|GL891937.1| GENE 32 33539 - 34858 1427 439 aa, chain - ## HITS:1 COG:PA3186 KEGG:ns NR:ns ## COG: PA3186 COG3659 # Protein_GI_number: 15598382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Carbohydrate-selective porin # Organism: Pseudomonas aeruginosa # 15 439 25 454 454 372 46.0 1e-102 MPNVMKLSVLTIAVLGSQFALANEPWSQDRQWLLGDWNGKRQQLEQQGYKFTASIMSQSA TNLNGGYNDSNTFENAAQLSLGANLDLEKIAGWKDTTASLVVTKRDGNALTLERIKDPRS SQLGNAQEIYGRGKIWRLSQAWVKKGFVDNTVQVKFGRMGMSEDFNSSQCEFQNLLLCGG QLGKSIGSIWYNSPVGVWATNVKYQFAPEWTLGVGVYEVNLDNIKTESNSDGFNLDMNNV KGATIPVELAWKPKLAAFNGLPGEYKVGALYSTAEANDIKTAGKVHDGKQSFWINAQQQL SHAGQDPKRGLYVSFNSVVNDKATTFVQSTQQLALWYKGPFDSRPNDSIGFGIANYVVND RAKDKQIATNESRGYYSYDPIASDYIPIQDDELNVELNYTYQWSPAVMLRPNIQYIHQPA GVKEVDDAWVAGLSVKVNF >gi|333032489|gb|GL891937.1| GENE 33 34918 - 36369 1778 483 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01992 NR:ns ## KEGG: ACICU_01992 # Name: not_defined # Def: putative 3-dehydroshikimate dehydratase (DHS dehydratase) (DHSase) (EC:4.2.1.-) # Organism: A.baumannii_ACICU # Pathway: Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:abc00400]; Biosynthesis of secondary metabolites [PATH:abc01110] # 1 483 1 483 483 897 100.0 0 MNTLRLTTLALGLMVSGIAAAQTYVVDRYQDDSNKGSLRWAIEQANANPSEASEILIQAV GKAPYAIKLNSALPEIKAPVKIIGTQWDKTGEYIAIDGSNYIKGEGAKACPGANPEQYGT NVRTMTLPGLVLRDVNNVTLKGLDIHRFCIGVLINRSSNNLIQHNRISNNYGGAGVMLTG DDGKGNPTATTTNNNKVLDNIFQDNGDGLELTRGAAFNLIANNHFVSTKANPEPSQGIEI LWGNDNAVVGNKFENYSDGLQINWGKRNYIAYNEMTNNSIGFNMTGDGNILDSNKVHGNR IGVAIRSEKDANARITLTKNLIWDNGKDIKRCEAGGSCVPDQRLGAIVFGVPALEHEGFV GSRGGGVVIEPSKLQKTCTQPNQQDCNAQPNQGIKAPKLTANKGSVTVEVNGLPNQRYQV EFFGNQNAASKEAEQYLGTITVATDTEGKAKANWKPTVKVASITANVTDRFGATSELGFV QVK >gi|333032489|gb|GL891937.1| GENE 34 36389 - 37222 978 277 aa, chain - ## HITS:1 COG:lin0494 KEGG:ns NR:ns ## COG: lin0494 COG0710 # Protein_GI_number: 16799569 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase # Organism: Listeria innocua # 38 269 15 245 252 170 41.0 2e-42 MNMKTLLSLSLLALPFFTAQVNAEPVALAAQAQPAATAVKTIVPITAKTKEQALAQAQVI ANTADADLAEFRIDLLSFASDTKQVIALGHELKKILGNKPMIATIRTKNEGSQLEISDAD YGKTYQAYLKNPFMDWLDVEMFRDQKVVSEIVQKAHQKKVLVVMSNHDFQKTPSQDEIEK RLLKQDQMGADVLKIAVMPKSKQDVFTLMNATLKVSQQTTKPLLTMSMGQLGTISRVATA NMGGSYSFGMIGQASAPGQIDVTKLKQILQTVQPTNP >gi|333032489|gb|GL891937.1| GENE 35 37285 - 37914 961 209 aa, chain - ## HITS:1 COG:RSc1442 KEGG:ns NR:ns ## COG: RSc1442 COG3485 # Protein_GI_number: 17546161 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Ralstonia solanacearum # 6 209 9 216 216 273 63.0 2e-73 MNNWNFQELKETPSQTGGPYVHIGLLPQQAGIEVFENNFNNQLVQDQTKGERIRLEGQVF DGLGLPLRDVLIEIWQADANGIYPSQADTREQKADPAFQGWGRTGADFETGVWSFNTIKP GATAGRKGSTQAPHIALVIFARGINLGLHTRVYFEDEAEANANDPILNSIEWAPRRQTLI AKRFEENGEVVYRFDIRIQGDDETVFFDI >gi|333032489|gb|GL891937.1| GENE 36 37929 - 38654 899 241 aa, chain - ## HITS:1 COG:RSc1441 KEGG:ns NR:ns ## COG: RSc1441 COG3485 # Protein_GI_number: 17546160 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Ralstonia solanacearum # 7 240 9 242 246 368 73.0 1e-102 MSQHSWGAYAQRNTDDHPPAYTPGYKTSVLRSPKNALISINETLTEVTAPHFSSNLFGPK DNDLILNYAKDGLPIGERVIVHGYVRDQFGRPVKNALLEVWQANASGRYRHPNDKFIGAM DPNFGGCGRTLTDENGFYIFRTIKPGPYPWRNRINEWRPAHIHFSLIADGWAQRLISQFY FEGDTLIDTCPILKTIPSEDQRRALIALEDKNNFIEADSRCYRFDITLRGRRATYFENDL T >gi|333032489|gb|GL891937.1| GENE 37 38665 - 39078 583 137 aa, chain - ## HITS:1 COG:PA0232 KEGG:ns NR:ns ## COG: PA0232 COG0599 # Protein_GI_number: 15595429 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Pseudomonas aeruginosa # 1 127 1 127 133 165 57.0 2e-41 MNDEQRYKQGIEVRTEVLGEKHVGRSLQNLNDFNQDFQNFISRYAWGEVWSRPGLPRHTR SLVTIAILLALGREDELRMHLRACFNNGVTKEDLKELILHSSLYAGLPAANAAMHMAEEV FKELGIEVNPIAAKEQD >gi|333032489|gb|GL891937.1| GENE 38 39094 - 40449 1479 451 aa, chain - ## HITS:1 COG:PA0235 KEGG:ns NR:ns ## COG: PA0235 COG0477 # Protein_GI_number: 15595432 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 11 450 10 447 448 509 65.0 1e-144 MASQDYATPSKSIDAQALINDAPLSKYQWMIAIICFLIIFTDGIDTAAMGFIAPALAQDW GVDRSQLGPVMSAALGGMIIGALVSGPTADRFGRKIVLAFSMLVFGGFTLASAYATNLDS LVVLRFLTGIGLGAAMPNATTLFSEYCPTRIRSLLVTCMFCGYNLGMATGGFISSWLIPT YGWHSLFLLGGWSPLILMILVILVLPESYRFLIVKGKNPEKVRKILNHIAPAQIQNATAF HVPEEKTEVVQKKNVFGIMFSKPYAKGTVLLWVTYFMGLVVVYLLTSWLPTLMRETGASM ERAAFIGGLFQFGGVVSALFIGWAMDKFNPNRVIAIFYFAAGLFAIAVGQSLGNSTLLAV LVLCAGIAINGAQSSMPALSARFYPTQCRATGVSWMTGIGRFGAVFGAWIGAVLLGNDWS FTAILSLLLIPATAAAVAVFIKSIVAHTDAT >gi|333032489|gb|GL891937.1| GENE 39 40492 - 41277 202 261 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163802692|ref|ZP_02196583.1| 30S ribosomal protein S21 [Vibrio campbellii AND4] # 9 261 7 269 271 82 25 4e-15 MKQTISNRQGKQLAVYTDCLKDAPVLVFSNSLGTDHGMWQSQLNELKSHFNVITYDTRGH GESDVISDTTLQNLAEDVVDILDALNIEKAHFCGISMGGITGLWLGIHHPNRFNSITVAN SAAKIGQTEAWLSRAESVEKNGLAELVKTTHTRWFSEKFDYQHNVVAQTTIQSLANTPAQ GYANACRALAYADLRNEIAQIQIPTLLIAGTEDPVTTVADAEFMQKAINNSQLAKLEASH LSNIEQPQRFTQELTRFIQQI >gi|333032489|gb|GL891937.1| GENE 40 41274 - 42629 1338 451 aa, chain - ## HITS:1 COG:RSc2251 KEGG:ns NR:ns ## COG: RSc2251 COG0015 # Protein_GI_number: 17546970 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Ralstonia solanacearum # 1 445 2 447 453 348 46.0 2e-95 MSQLYASLFYQKDVTEIFSDSSLITYMIQVEVALAQAQAQVGVIPQNAANTIAQVAEQAL EKFDFSALAVATGLAGNIAIPFVKQLTAIVKDTDEDASRYVHWGATSQDILDTACILQCR DALNIVEGQLQQCYTTALHQAKQYRHQVMIGRTWLQQALPITLGHKLARWASAFKRDLDR IQAMKSRVLTAQLGGAVGSLASLQDQGSLVVSAFAKQLNLTVPTSTWHGERDRIVEIASV LGMIVGNTGKMARDWSLMMQTEIAELFEPTAKGRGGSSTMPHKRNPVAAASVLAAANRVP ALMSSIYQSMVQEHERSLGAWHAEWLAIPEIFQLCAGALSRTGEVLQGFEVNAEHMQQNL ECTNGLIMAEAVMMALAPKIGRLNAHHLVEAACKTAVAQNQHLFDVVSQLDEVKGQFSQE EIRNIFKPENYLGNIQQQIDAVLKEAQGESK >gi|333032489|gb|GL891937.1| GENE 41 42632 - 43222 748 196 aa, chain - ## HITS:1 COG:RSc2252 KEGG:ns NR:ns ## COG: RSc2252 COG0183 # Protein_GI_number: 17546971 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Ralstonia solanacearum # 3 196 208 400 400 249 70.0 2e-66 MAVEIPQRKGDAVVIDTDEHPRASTTLEALSKLKPVVKADGTVTAGNASGINDGAAALLI ASDDAVQAYNLKPRAKIIASTAVGVEPRIMGFAPAPAIKKLLKQANLTLEQMDVIELNEA FAAQALAVTRDLGLPDNSDKVNPNGGAIALGHPLGASGARLVTTALNQLEQTGGRYALCS MCIGVGQGIALIIERV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:11 2011 Seq name: gi|333032488|gb|GL891938.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld431, whole genome shotgun sequence Length of sequence - 3949 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 76 - 621 470 ## COG3926 Putative secretion activating protein + Term 756 - 785 2.1 + Prom 1021 - 1080 7.4 2 2 Tu 1 . + CDS 1103 - 3421 1299 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 3484 - 3527 6.2 + Prom 3494 - 3553 10.0 3 3 Tu 1 . + CDS 3703 - 3949 75 ## ABAYE0731 lipid A phosphoethanolamine transferase, associated with polymyxin resistance Predicted protein(s) >gi|333032488|gb|GL891938.1| GENE 1 76 - 621 470 181 aa, chain + ## HITS:1 COG:STM0016 KEGG:ns NR:ns ## COG: STM0016 COG3926 # Protein_GI_number: 16763406 # Func_class: R General function prediction only # Function: Putative secretion activating protein # Organism: Salmonella typhimurium LT2 # 7 179 5 176 177 171 50.0 5e-43 MNIEQYLDELIKREGGYVNNPADRGGETKYGITEAVARTNGFKGNMKDLPLDVAKAIYKK QYWTDPRFDQVNVISSLVAEELLDTGVNCGTGFAKPLLQRALNLLNNQGKAGWPDLTVDG IYGPATLNALKTYLAKRGKDGEKVLVRVLNIMQGQRYIEICERNPSQEQFFYGWIANRVV I >gi|333032488|gb|GL891938.1| GENE 2 1103 - 3421 1299 772 aa, chain + ## HITS:1 COG:PM1282 KEGG:ns NR:ns ## COG: PM1282 COG1629 # Protein_GI_number: 15603147 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pasteurella multocida # 43 770 49 776 778 352 32.0 2e-96 MKPLAALPLIFIAIQQVQAEERIAILKPLVFKANALKEKNYVVDKEKVESSNTIGDALKN ITGIQSTSFGPNAGAPVIRSLSGNRVGVIENGEFINGMNAFSGNINIPFDPIFIEKVIVN KNTDNIRYGGNAIGGSVQIESGLIPKKIEEKPNKLDIVFRKGFNDFDVKGFNFNINDQKN WSTNIRYSEYEISSYKIPGNSKAKLCEDQIFSNSGGINSALAASCQKDSRVQHIYNKSSQ PYIDKFMTENPDWADGDFSFYTDKPTSIWGGKTYINPKNPEYIPNTPQNTIKKINTDVTP NYFKKLGNSYAQNENIGFGTTYFFDKGFIGLSADKKKSEYGVPGFSLQNQSFADSYETLP VGVKIDQNRFVLNSNFIQPISSAEEISLNFQQLSNKSGEYVGTAKANEYKIDNQLIELIM KQSSFKGLDGILGFSLKNRNIEGSGTQRYLPNVSTISKAIFLQEELNIKQFTLNTGYRFE RIEHELQDNDFKLARNASNSRIENRKYNLNQYFIGGEYKVNNFINLKVDYGISERAPEVN ELYSSNVHYSVMAQEEGDQNLKPEKSKSLELGMFLNWNNWVMQLVGYQMDFENYMYLSHS GVAVQNRLPLKYWKQTDTDVKGFEIDLIYDFNLAHIGNIKLGGLADFVKNKAVNPTDIRL ANDGVYLPNMPTNRYGMFLEWRNDSWKGKISSIYYDEPRYLGKNVIQEVPLSGYNLLEFK IDKKLKIKNASFDIFLNGTNLLNEEARPQNSPLKYIAPLPGRAFQLGITMHI >gi|333032488|gb|GL891938.1| GENE 3 3703 - 3949 75 82 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0731 NR:ns ## KEGG: ABAYE0731 # Name: eptA # Def: lipid A phosphoethanolamine transferase, associated with polymyxin resistance # Organism: A.baumannii_AYE # Pathway: not_defined # 13 82 11 80 549 98 60.0 7e-20 MALNVFKFKKICKDVTLLNFNLLLSIWLGLFLNIGFFKKIHQLTPYNGIKSVLFLGATLV ILIAAYNLIFQLINWKWTAKIF Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:14 2011 Seq name: gi|333032487|gb|GL891939.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld432, whole genome shotgun sequence Length of sequence - 1712 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 621 926 ## ABBFA_000474 outer membrane protein A precursor (190 kDa antigen) - Prom 718 - 777 80.3 2 2 Tu 1 . - CDS 779 - 1561 1032 ## ABBFA_000474 outer membrane protein A precursor (190 kDa antigen) - Prom 1617 - 1676 5.4 Predicted protein(s) >gi|333032487|gb|GL891939.1| GENE 1 3 - 621 926 206 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000474 NR:ns ## KEGG: ABBFA_000474 # Name: not_defined # Def: outer membrane protein A precursor (190 kDa antigen) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 195 508 719 807 178 79.0 1e-43 MITDIIGGVTGGVGGDNPLGVVTDIIGGVTGGIIGGGTSPLSPVIDVVQGGIDILQGVES LKTEIINTGIDTVADTIIGVLPQAEHPVSEIADLGTLTFETSRDTVNGALEVVSDLVGGD IQGATENATGILGTLIQNGSTATGIVTDILGGVTGTIGGVTGGIGGDNPLGIVTDIIGGV TGGIGGDNPLGVVTDIIGGVTGGIGG >gi|333032487|gb|GL891939.1| GENE 2 779 - 1561 1032 260 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000474 NR:ns ## KEGG: ABBFA_000474 # Name: not_defined # Def: outer membrane protein A precursor (190 kDa antigen) # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 260 1 260 807 272 98.0 9e-72 MFLLKNLVSSISKVTQDLGNIVSITPVVNTGSSVNVNVSDINIANVSTTGLLSNVISTVT DTVSHTTTDLVSNVVGTVTGTVGSTSPIDTVTNIIGGVTGGVTGNPLEVVTDIIGGVTGG VVGGTSPISPVIDVVQGGIDILQGVESLKTEIINTGIETVADAVIGVLPQAEHPVSEIAD LGTLTFETSRDTVNGALEVVSDLVGGDIQGATESATGILDTLITNGTTATGIVTGVVGSV TDVIGGVTGGVDGNPLEVIS Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:25 2011 Seq name: gi|333032486|gb|GL891940.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld438, whole genome shotgun sequence Length of sequence - 868 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 223 - 555 81 ## AB57_0266 NTP-binding protein Predicted protein(s) >gi|333032486|gb|GL891940.1| GENE 1 223 - 555 81 110 aa, chain - ## HITS:1 COG:no KEGG:AB57_0266 NR:ns ## KEGG: AB57_0266 # Name: not_defined # Def: NTP-binding protein # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 110 60 169 169 176 100.0 2e-43 MFLRELSSAFTRTKGGEAPPLIRPPEISPRQAEGRASLTGPKSPARASAAMTAAALSRVD DGSGGYRQPLAQPRHRGRTASDLEATGPSHPDMDLDARTDVRFRVLGVLR Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:28 2011 Seq name: gi|333032485|gb|GL891941.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld446, whole genome shotgun sequence Length of sequence - 1780 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 113 - 1735 1221 ## ABAYE2691 bacteriophage protein Predicted protein(s) >gi|333032485|gb|GL891941.1| GENE 1 113 - 1735 1221 540 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2691 NR:ns ## KEGG: ABAYE2691 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 540 615 1148 1148 1085 98.0 0 MLFNFRNIIPDSYKHDLTFGVMDDYDGLIYEYTDPTDDSRINIYLPDKGAKNPKEVKSVG VRNKWQAHFNAYRIWNKLRFQRKSITFDAAPESELLVLRDRIAVADYRNGIHQSGEVVQQ EGLILTLSHDVDFTPPPDFIAGKSYVIYLQMGDGTVDLIPITPGSAKNKVVLGRLPNGAL KLSPDDFVNTIYTVVNDDTKGSLPYLVAKREPADQFSNTITAINYDERYYLNDKDFIDVP VDDSPIYIRYDQLDINLARLYQMQRGDLPTTGEISFVVEAGALVSSSSSYRPETRFVYKF DYNSSPPKREYIVPAASELPAIDTGEFPPDLVVNLTIKGAVVGRGGDGGLPHLAFGAWST DPDYNFTKTRRDGFQGAPGLLNRHSKLNLIIDGGTLARGGSGGGATPSGIYTGLSYGVQG IPGGAGAPFGRVMTGQPITNDSQDWRWYFNGDFMVVKVTDAEATVPGKGYRTQNDRYGSP LSGDGGSWGQLGTESTNDGTWNWQYHGTTEGQPGPGGPAIVGVAPLTTQLINGGKILQTL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:39 2011 Seq name: gi|333032484|gb|GL891942.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld461, whole genome shotgun sequence Length of sequence - 507 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 506 494 ## ABSDF1794 hypothetical protein Predicted protein(s) >gi|333032484|gb|GL891942.1| GENE 1 2 - 506 494 168 aa, chain - ## HITS:1 COG:no KEGG:ABSDF1794 NR:ns ## KEGG: ABSDF1794 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 168 4 171 305 321 99.0 6e-87 GAKIRLYACEEAVLGTTPANPVWYTVRRVTDSLTENVTTEDSSEVVDSRFRQGAVVTEAE VTGQLEFELSLGTFDLFLNVLAFNNWAANALSFGGGVRKSLTLVKVFEDIGQVFIYRGIQ VNTGEMTIQTTGKITGNFGLVGSSFTRQQVNPVTNPIPASTRPLVSMP Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:34:44 2011 Seq name: gi|333032483|gb|GL891943.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld462, whole genome shotgun sequence Length of sequence - 7177 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 4, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 826 393 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 2 1 Op 2 . - CDS 854 - 1060 308 ## ACICU_02601 hypothetical protein - Prom 1201 - 1260 4.1 - Term 1194 - 1241 9.6 3 2 Op 1 7/0.000 - CDS 1263 - 2597 1285 ## COG0477 Permeases of the major facilitator superfamily - Prom 2780 - 2839 2.8 4 2 Op 2 . - CDS 2925 - 4049 1257 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 5 3 Op 1 1/0.000 - CDS 4151 - 5248 1278 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 6 3 Op 2 . - CDS 5258 - 5824 364 ## COG1309 Transcriptional regulator - Prom 5971 - 6030 10.8 + Prom 6022 - 6081 13.8 7 4 Tu 1 . + CDS 6143 - 6700 229 ## ABAYE1075 LysR family transcriptional regulator Predicted protein(s) >gi|333032483|gb|GL891943.1| GENE 1 1 - 826 393 275 aa, chain - ## HITS:1 COG:RSc2187 KEGG:ns NR:ns ## COG: RSc2187 COG0697 # Protein_GI_number: 17546906 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 16 274 19 270 308 125 32.0 7e-29 MQQGSMKLNISLIQLGALFAFISAFLFSSKAIFIKQAYSLTPSLDAITLMAIRMGIALPF FLVICWFCRHQNRNIKLIDFLYLLSVGLLGYYISSWLDFYGLMFITASLERIILFLYPTM TVLASSFILKQKLSSKTIFALVLSYGGTVIVMLQEQKTLPDQHNFWFGASLVFASAVAFA CYLLLTPPLIKKFGSWNLTGLSLSAACIGTLIHFLMVTSHPVQLLSSLPVQVIWYGICLG LFVTVLPTLLLILSIEYVGATQSAIISSISPIVTI >gi|333032483|gb|GL891943.1| GENE 2 854 - 1060 308 68 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02601 NR:ns ## KEGG: ACICU_02601 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 68 1 68 68 103 100.0 2e-21 MKQWNYSNARAQLTMIMDQAVAGHPVEITRRGRESAVIISKTSYEAYKKAEYDVAYYKIS VSKENSEA >gi|333032483|gb|GL891943.1| GENE 3 1263 - 2597 1285 444 aa, chain - ## HITS:1 COG:YPO2459 KEGG:ns NR:ns ## COG: YPO2459 COG0477 # Protein_GI_number: 16122680 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 9 439 5 433 452 226 35.0 9e-59 MNQQQVVSPPQLISQDQIARRFMTKLAWLMAGGMFIDGFVLGYLGALMPSITADLHLSTT WQGLIGAASLIGIFFGAPIGGYFSDRFGRKPLFMIDLFIFFICSIGQFFASDPYTLFIAR LLMGVAIGIEYAVGWPMLAEFAPARLRGKLLILTETSWFVGYLVSYTLSFIMIENHIASW NVILGISAIPSLIVLLMRSGIPESPRWLMSKGRKEEASRIAHKYFTEEDKNDILNQKHAN VGQKTSFFDLFKSKNIKGTTLVSIYFIGTSAPYFAIGVFIPMILEKLGLQDGIKGGLFLN TFAVFGTLAAVLLIERVSRRKMAILPILVCTIALVVVALAANHPTWILIGFLVFAFANAI TAGMISVIPGEVLRPEISCSGTGFAAAMSRIGAAIGVFLMPMFVAAHGAALAVWIAAGVC LIATVITYLFMPETKGKSMSEIFH >gi|333032483|gb|GL891943.1| GENE 4 2925 - 4049 1257 374 aa, chain - ## HITS:1 COG:mll7353 KEGG:ns NR:ns ## COG: mll7353 COG4948 # Protein_GI_number: 13476122 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Mesorhizobium loti # 1 368 1 362 367 239 38.0 8e-63 MKIKRIELYQIDLPYSGGVYHLSGGREYRSFDASIVKIIADNGLEGWGESTPFGSTYIAS HALGARAGIAEIAPHLLGKDPRQVDRINETMDNALVGHNHAKSALDLACWDLFGKSVNLP VCELLGGSTGRRLPVISSIHADTPDAMRENVAKHRELGYLGHSVKIGAVDSEGGPVLDAE RIKASLADQKPGEFFIVDANGGLTPEMALRIFRLLPKGLDFVLEAPCKTWRETKSLRQRC DVPFSLDELIQQDEDLIHAITEDLIDGVGLKISKAGGLTHSRRHRDIGLAAGLSLSVQET VGSDIPFAAIAHLGATIPERNLRCLLDTRGMVSIHTAEFDAPIVDGGVMVPNKPGLGITV DEDLLGSPVAVWGD >gi|333032483|gb|GL891943.1| GENE 5 4151 - 5248 1278 365 aa, chain - ## HITS:1 COG:SMb20422 KEGG:ns NR:ns ## COG: SMb20422 COG0604 # Protein_GI_number: 16264156 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 3 358 7 356 359 275 45.0 9e-74 MVLPTKMHAVLLKGHGGLDQLEYRTDVTVPTPADDEVLIQVSAAGVNNTDINTRIGWYSK TNEQATNTGGANGLESISDDDASWSGTPLKFPFIQGADCCGKIVAVGKNVDPSRIGERVI VRTMLRAYVDYRPYECWTFGSECNGGFAQFATVKSAEAYKINSDWTDEELASIPCSYSTA ENMLHRIGLGAETVLITGASGGVGSAAVQLAKRRGAQVIALCSLSKADEVLACGADRVID RNADLVKELGKESIDVVIDLIGGPQWPSLLEVLRKGGRYANAGAIAGPISQIDLRTVYLN DLTLMGCTFQEDEVFTNLISYIEKNEIRPLVAKTYPLNEIAKAQEEFLSKKHLGKLVLTV PSVEV >gi|333032483|gb|GL891943.1| GENE 6 5258 - 5824 364 188 aa, chain - ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 185 9 192 193 94 32.0 1e-19 MSKAQDILNTAERLFDYQGFHATGIDQIVREAEVTPRTLYRHFHSKEQLILKVLEERELR FFRKLQQCIENKENSIPNWVAVFNELENWFTEESDRGCLFLRALAEYRHKETEIVQTVLI HKQRTLDFLMGQFAKTSSDHFKDRAESLMLIIEGAVALAPVIGGKAAIQRASKLAHQLLQ PTTHPLLH >gi|333032483|gb|GL891943.1| GENE 7 6143 - 6700 229 185 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1075 NR:ns ## KEGG: ABAYE1075 # Name: not_defined # Def: LysR family transcriptional regulator # Organism: A.baumannii_AYE # Pathway: not_defined # 1 185 1 185 185 289 91.0 5e-77 MSNMEIPFSSSMIIHTSRYLFDQHGFHNVGVDRISKESNVSKMTFYKYFKSKEKLIELCL EFHQETLMQQVSSILSANLKSQNLDKLKEIYFLHADLKSHYHLIFKAIFEIQKIYPQAHR VVIKYREWLINIILEILLNIKSNASIEEARLLIYIIDSSIIQSLINDEIDHREYIWSYFS SKISL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:35:00 2011 Seq name: gi|333032482|gb|GL891944.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld489, whole genome shotgun sequence Length of sequence - 37615 bp Number of predicted genes - 33, with homology - 32 Number of transcription units - 19, operones - 8 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 583 190 ## COG1309 Transcriptional regulator + Term 632 - 694 -0.1 - Term 974 - 1006 2.0 2 2 Tu 1 . - CDS 1018 - 1704 868 ## COG1741 Pirin-related protein - Prom 1832 - 1891 8.9 - Term 1887 - 1938 4.6 3 3 Op 1 . - CDS 1949 - 2452 539 ## COG1171 Threonine dehydratase 4 3 Op 2 . - CDS 2482 - 2916 359 ## COG1171 Threonine dehydratase - Prom 2962 - 3021 4.9 5 4 Tu 1 . - CDS 3032 - 3190 96 ## ACICU_02591 hypothetical protein + Prom 3044 - 3103 5.8 6 5 Tu 1 . + CDS 3170 - 3793 500 ## COG2964 Uncharacterized protein conserved in bacteria 7 6 Tu 1 . - CDS 3790 - 4650 686 ## COG2375 Siderophore-interacting protein - Prom 4825 - 4884 7.0 + Prom 4781 - 4840 7.9 8 7 Tu 1 . + CDS 5043 - 6890 1147 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins + Term 6952 - 6999 2.1 - Term 6890 - 6942 8.1 9 8 Tu 1 . - CDS 6961 - 9057 1636 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins - Prom 9245 - 9304 7.3 + Prom 9088 - 9147 14.4 10 9 Tu 1 . + CDS 9204 - 9311 58 ## + Prom 9327 - 9386 6.7 11 10 Op 1 . + CDS 9492 - 9623 70 ## ABBFA_001054 hypothetical protein 12 10 Op 2 11/0.000 + CDS 9623 - 10564 709 ## COG4606 ABC-type enterochelin transport system, permease component 13 10 Op 3 10/0.000 + CDS 10564 - 11511 508 ## COG4605 ABC-type enterochelin transport system, permease component 14 10 Op 4 5/0.000 + CDS 11508 - 12278 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 15 10 Op 5 2/0.125 + CDS 12285 - 13253 761 ## COG4607 ABC-type enterochelin transport system, periplasmic component + Prom 13255 - 13314 1.5 16 10 Op 6 . + CDS 13339 - 15621 2019 ## COG1629 Outer membrane receptor proteins, mostly Fe transport + Term 15644 - 15687 10.3 - Term 15640 - 15665 -0.5 17 11 Op 1 . - CDS 15687 - 16997 967 ## COG3486 Lysine/ornithine N-monooxygenase 18 11 Op 2 . - CDS 17045 - 19894 1915 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins - Prom 20083 - 20142 7.6 + Prom 20070 - 20129 1.7 19 12 Op 1 5/0.000 + CDS 20149 - 21777 1293 ## COG1021 Peptide arylation enzymes 20 12 Op 2 . + CDS 21795 - 22664 725 ## COG1535 Isochorismate hydrolase + Prom 22669 - 22728 4.1 21 13 Op 1 . + CDS 22782 - 23933 705 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins + Prom 23948 - 24007 3.4 22 13 Op 2 . + CDS 24030 - 24185 82 ## ACICU_02575 hypothetical protein 23 13 Op 3 35/0.000 + CDS 24178 - 25788 1484 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 24 13 Op 4 . + CDS 25785 - 27380 1427 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 27404 - 27445 4.3 25 14 Op 1 . + CDS 27453 - 28187 495 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis 26 14 Op 2 . + CDS 28198 - 28953 219 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase + Prom 28961 - 29020 6.9 27 15 Tu 1 . + CDS 29078 - 30247 976 ## COG1169 Isochorismate synthase + Term 30334 - 30364 1.0 - Term 30311 - 30362 11.2 28 16 Tu 1 . - CDS 30368 - 31615 1367 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 31848 - 31907 8.5 + Prom 31832 - 31891 6.1 29 17 Op 1 . + CDS 31915 - 32988 1371 ## COG0407 Uroporphyrinogen-III decarboxylase 30 17 Op 2 . + CDS 32995 - 33789 529 ## COG3739 Uncharacterized integral membrane protein + Prom 33807 - 33866 6.7 31 18 Op 1 . + CDS 33935 - 34405 643 ## ABSDF1152 putative signal peptide + Term 34416 - 34456 7.1 32 18 Op 2 . + CDS 34467 - 36359 1744 ## ABAYE1109 signal peptide + Term 36381 - 36417 0.5 - Term 36356 - 36413 3.5 33 19 Tu 1 . - CDS 36427 - 37578 1038 ## COG1680 Beta-lactamase class C and other penicillin binding proteins Predicted protein(s) >gi|333032482|gb|GL891944.1| GENE 1 2 - 583 190 193 aa, chain + ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 16 180 12 178 193 60 25.0 1e-09 NGKTMPNLVLPTRALYVVNKAIDLFHHRGFHLIGVDRIVKESEITKATFYNYFHSKERLI EICLMVQKEKLQEQVVAMVEYDLSTSAIDKLKKLYFLHTDLEGPYYSPPPFKAVFEIKNS YPNAYQSAVRYRTWLKNEIYSQLRTLKPDVSFTDAKLFLYMVEGTIIQLLSSGGVSEREG VFECFLRGLTTCK >gi|333032482|gb|GL891944.1| GENE 2 1018 - 1704 868 228 aa, chain - ## HITS:1 COG:YPO3956 KEGG:ns NR:ns ## COG: YPO3956 COG1741 # Protein_GI_number: 16124084 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Yersinia pestis # 4 228 3 229 231 191 45.0 7e-49 MNAYLHRSEDRGHVKAGWLESYHSFSFGSWYNPKYMGVSALRVINDDRIDAHNGFGTHSH DNMEILTCVLDGAISHRDTMGNEGQIKAGEWQLMSAGTGVAHSEINNTDTPVHLLQIWII PDVKEAEPNYQQISLDPRNQPNEWHLIAGPDANAPMHIRQDAQVKSAVLEKGRELPVETS KRVNYVHVISGEVRIGEYEVKAGDALVFEDNAVIHANEDSQFIWFDLP >gi|333032482|gb|GL891944.1| GENE 3 1949 - 2452 539 167 aa, chain - ## HITS:1 COG:SPCC320.14 KEGG:ns NR:ns ## COG: SPCC320.14 COG1171 # Protein_GI_number: 19075215 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Schizosaccharomyces pombe # 1 166 157 322 323 239 77.0 2e-63 MIAGQGTAAKELFEEVGDLDYLFVCLGGGGLLAGSALSARQLSPNCKIYGVEPALGNDGQ MSFRKGEIVHIDTPPTIADGAQTQYLGKLTFPIIQQKVDDILTVTDEELINAMKFFAERM KMVVEPTGCLGFAAARNLKHELKGKRIGIIISGGNVDISKYAEFLSA >gi|333032482|gb|GL891944.1| GENE 4 2482 - 2916 359 144 aa, chain - ## HITS:1 COG:SPCC320.14 KEGG:ns NR:ns ## COG: SPCC320.14 COG1171 # Protein_GI_number: 19075215 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Schizosaccharomyces pombe # 3 142 4 143 323 207 71.0 7e-54 MKNLTLPNYEDVAAAAERIKDFINKTPVLTSRTVNNEFEAEVFFKCENFQRVGAFKFRGA MNALLQFNETQKKAGVVAFSSGNHAQAIALSSKILGIPATIIMPKDAPAAKMAATREYGG NIVEFDRYTEDREKLEKRLLKKMV >gi|333032482|gb|GL891944.1| GENE 5 3032 - 3190 96 52 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02591 NR:ns ## KEGG: ACICU_02591 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 52 1 52 52 80 100.0 3e-14 MLITIAQCISPNDLITVSNPRVKYTNSNLDFLSNFKLNVNQNLISLCYQIRK >gi|333032482|gb|GL891944.1| GENE 6 3170 - 3793 500 207 aa, chain + ## HITS:1 COG:RSp1517 KEGG:ns NR:ns ## COG: RSp1517 COG2964 # Protein_GI_number: 17549736 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 1 206 3 210 214 196 46.0 4e-50 MGNRDKHLLTQLDTIAKGLSETLAPFCEVVVHDLTNPEHAILSIHNNLSGRKVGDPATEL GLARIMSPEFPNLITNYANQFADGRPAKSTSIGIKDEEGQYVAALCMNIDLTLFRGMQST LEHFTKIETDSIIENLEPNGTEAIRRYIDQFASKHATTPRMLKLNERKQLIQELKNNGLL EIKKAVETVAQHLGISRASAYLYVKET >gi|333032482|gb|GL891944.1| GENE 7 3790 - 4650 686 286 aa, chain - ## HITS:1 COG:Cgl0039 KEGG:ns NR:ns ## COG: Cgl0039 COG2375 # Protein_GI_number: 19551289 # Func_class: P Inorganic ion transport and metabolism # Function: Siderophore-interacting protein # Organism: Corynebacterium glutamicum # 10 284 2 272 274 155 31.0 7e-38 MTKIAEKSKQEYGDLLKEKDHLQDMEQLEMTIVSIQTPYPSIVRIQGKINTLQPELWQAP NLAIRLIVNNPPEGQPISRVYTVRSFNPVNAQIEIDFVKHEDLSPAMEWLNSAQVGTKIG LIGPRPHFIPNFTAKKHVVMFADDTAVPALYSILKQWELGISADIFIESFEKDIASQLPE LEHVKIHSFHKEHHTAQKGLLLKAAFALENYENITIWAACERNEARALRQFFLEDQHLNK NDVRIAGYWRDGVSSSELDKLRAQHYQEHIQQGKTLNEYDDLDLAN >gi|333032482|gb|GL891944.1| GENE 8 5043 - 6890 1147 615 aa, chain + ## HITS:1 COG:VC2209_2 KEGG:ns NR:ns ## COG: VC2209_2 COG1020 # Protein_GI_number: 15642774 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Vibrio cholerae # 4 549 425 975 1491 480 45.0 1e-135 MLKDLSQNLGQMNDKNNNVENFLKQIYENIFDQNSNRTALIFENRSISYAEVGTQVAKVM YALKMQDLATGSVVAICLRKSPEHIYTALACALTGIIWLPVDMDSPPSRLNYLLTNSRAD VVVSDSSIAGVQTLNINEILSATTEYEPSFNAEINRLPAYYLYTSGSTGTPKCVVLNNQA TENTLQQTISEWKITADDVIMAVTPFHHDMSVFDVFASMAVGATLVVPSFEQSKNAVVWA DLVDRCKVTIWSSVPAIVDMLFSVAQKEQLQSLRLIAQGGDYIKPSLITKLRQQLLNARL FSLGGPTETTIWSIWHEINEQDQEIIPYGKALENNQYFILDENLKPCQMGEVGTMYMTGL NLSNGYLLDGEINYKDFVDIQVSENETQTAFRMSDQGYFREDGNIIFAGREEGYLKIKGV RISAAEVENALTKHPYIHNCVVVSCVHPTTETQELVAVYTLENKYKTTRLNSPELKNFLK VHLPSSHIPSKYLSIETIPLTRNGKIDRKAVQEIAQEKIYVSSTLSANSTKTLSSVAELG DSVLSIFRECIADSQAEKMDIFYRSEILAIGIRPKQLMSIAQKLSQKLNTQIDFYTLISC KTIQDVVNKVEQQIK >gi|333032482|gb|GL891944.1| GENE 9 6961 - 9057 1636 698 aa, chain - ## HITS:1 COG:VC2209_3 KEGG:ns NR:ns ## COG: VC2209_3 COG1020 # Protein_GI_number: 15642774 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Vibrio cholerae # 276 684 4 424 469 294 38.0 5e-79 MLEQFSKSPSLLSVTDYEEHIWMLQLQQPEQVNRRFNLWKLNQDLDIQLLIKAIQDIIKT TPDLNVRYTFSVEGDLYKYPFDDHSACLEVKKSNTEHVFEQVNTLKAQAWNAEFHPPFFT SLVETEQDYFLILALHPILDESYQKSDFIQTIQNRYQQYSPHNMPLVLTEIDISNQLDAN STKASEQSNQNYVSEIILEEFRNTLAEPEMSQHDDFFDFGGHSLLATRIIGNLLNKHGIE IQFNDFFKSPSAADLAQYALVKSAKTEKTTLQSVDQAPLTLAQDFLWQAYSAFDFSPIYN LPFAVEFLEEINEDVFFQAFTDIVERHAGLRTIFNSANGQTYQQVIPTSELQQFKWFWNS AESKDATLASEASYKFDLTRELPLRIRLIRNAKGRQTLSFLVHHMVIDEWSLNTIMADLA HAYLARSNAQAPNWKAPAQSILDFSLLQQKQGINQDHLNYWTNLLRGATKGLNLPVSEHE LNAEKEKPPVQWLELKFAPEMHEKLLAFSRQHSSSIFTVLYTAIAHALQQQGNLKDIVIG TSASGRTDPEFFDTVGYFTTMVAHRTQFSPSDSFQSLLHNISTMINTSMAYADIPINHIQ NALGMRADEGLLFDVFIHIHSNNALNGALKTPQGQNLPYRQILPERDESMFGLHFEIMEN VIDGQHQLSMIITYQAHRFPTATVQSICEKIKATLAQI >gi|333032482|gb|GL891944.1| GENE 10 9204 - 9311 58 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNCTDVTVGLHFTFKHTIIDSHLHQDYYLQVDSAN >gi|333032482|gb|GL891944.1| GENE 11 9492 - 9623 70 43 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_001054 NR:ns ## KEGG: ABBFA_001054 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 43 1 43 43 74 100.0 1e-12 MRIFNHERLISPSNVEQIFPRFGLMGLNLQFASALLRSSGARH >gi|333032482|gb|GL891944.1| GENE 12 9623 - 10564 709 313 aa, chain + ## HITS:1 COG:BH1025 KEGG:ns NR:ns ## COG: BH1025 COG4606 # Protein_GI_number: 15613588 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus halodurans # 5 313 6 314 317 259 44.0 3e-69 MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAV CGVILQHIVRNKFVEPETSGGLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYI AIIRRIRFRNMVLVPVIGLMYGSVLSALAEFYAYRFNILQSMQGWLLGDFSKIVQGHYEV IYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVG GIIFLILILREFR >gi|333032482|gb|GL891944.1| GENE 13 10564 - 11511 508 315 aa, chain + ## HITS:1 COG:BS_yclO KEGG:ns NR:ns ## COG: BS_yclO COG4605 # Protein_GI_number: 16077449 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, permease component # Organism: Bacillus subtilis # 8 310 10 310 315 180 35.0 4e-45 MRITKLWMIYLIVICLAVCFLFLNSGLDFDYVIPNRLLRLATIVIAGICVAFSSIVFQTL VGNRILTPSIMGYEAIYLLWQVLLLFFWGTHGLSQLGINGNFFISIVLMLLYSWVIHKWL LPYGRNDVFLLLLLGLVLTMVVGTVTQFIQLKINPGEFSVFQGLSYASFNRSQPETLFYA SVAVVIVLFLGRKALPVLDVLVLGREQAISLGIHHHRYVSFYLALIAILVAVSTSLIGPT VFMGVFIANITYALARSYKHKLTLPMGCAITIAIFIAAQILVEHVFNYKTTVSILVNLVC GIYFLALTVRTRGVA >gi|333032482|gb|GL891944.1| GENE 14 11508 - 12278 214 256 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 228 1 231 245 87 25 1e-16 MIHVKNINKSYGNKPILTDVNVEFPTGQVTSLIGPNGAGKSTLLMMMARLIEPDKGEIFL NHQNIADIKTAVYAKHVATLRQAPGFNLRLTVEELVSFGRFPYSRGVLTEQDHQVVDEAI EFLSLEPLRKSYIDEISGGQRQMAFLAMTIAQQTDVLLLDEPLNNLDMKHAVQIMRALRR LCDEQGRTVILVIHDINFATNYSDHIVALKNGKLHFSGLTEQVITEAQLNDLYELDFEIT YSERGCMCNYFNSSGA >gi|333032482|gb|GL891944.1| GENE 15 12285 - 13253 761 322 aa, chain + ## HITS:1 COG:BS_yclQ KEGG:ns NR:ns ## COG: BS_yclQ COG4607 # Protein_GI_number: 16077451 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, periplasmic component # Organism: Bacillus subtilis # 5 322 2 316 317 191 34.0 1e-48 MNWKKKYGGVALIIAAAVTLQACDQKVADTTQASQKLAEPITVKHALGTTVINHLPQRVA VLDMNEADFLDQLNVPIMGMPKDYVPHFLEKYKKDAQIQDLGAIVQPNMERIYALKPDLI LMTPLHVNHYQELSKIAPTIHYDINFNNSESNHIGLVKDHMMTLGKIFNKEDLARQKVSE LDEQVKQVQAVTANRPERALVVLHNNGAFSNFGIQSRYGFIFNAFGVKPASGVVDTSLHG QPISSEFIKKADPDILYIVDRTAVMEHRSNINAASVENPLLRQTKAWKNGRVIFVDADAW YTTAASPTSLKIVMEDVKKGYQ >gi|333032482|gb|GL891944.1| GENE 16 13339 - 15621 2019 760 aa, chain + ## HITS:1 COG:PA1910 KEGG:ns NR:ns ## COG: PA1910 COG1629 # Protein_GI_number: 15597106 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 58 760 107 804 804 491 39.0 1e-138 MNQNIKGLSMNNVSYNRNFKTGNDQRINHRSFVLNGVASAQIALRLGYALGTVFVLCASN TYAAVIDNSAKTLEQQTAQTNVAALPAITVKAEQDDTYAGGQVSSKSSVGFLGNKTVMET PFNTIAYTDTYIADKQAKDITSVIAKTDPSVFTNAASGGWSENYYIRGFESSPSDMSMNG LFGITPYYRTSPEMFEKINVLKGPSALLNGMPPTGSIGGTVDLTTKRATDEPLTRLTTTY MSDSQFGGHLDVGRRFGSDKEFGVRANAVYRDGSGPVEKQDLKTELFSLGMDWHGDRARV STDLYTSKDRVDGVTRGINLGKDIAIPKPPKPETLLNPDWSFVDIQDKGAMIRGEYDLTN NVMGYATYGQSKTEYKYNGAMSATVLDNTGTFQTSIGQLAFNVDKKSADVGLKGKFNTGA VGHQWVVNATYYKHNQDDYGVRNVAGAEWTTNLYDPIWGKAVPFNAPLISNSELQLNSYG LADTLSFIEDRLQLTLGVRYQEVESSNLFVPTSTLTKYKKNATTPGAAILFKATDKVSIY ANYIEGLTKGDAAPLTAANYPTIFAPYKTKQTEFGVKFDQGTFAHTLSLFEIKKPSAYTD LVTNIYTSGGEQRNRGIEWSFFGSPIENVRLMGGASYIEPEVTKTAIQSNEGNMAVGVPK TQGKLGVEWDNEVAQGVLTLSSNATAVSKQYIDQENTLHIPGRTLIDVGARYKTSISNHP ITFKADINNLMNKAYWGMPKLSNLALGAPRTYMLSVSYDF >gi|333032482|gb|GL891944.1| GENE 17 15687 - 16997 967 436 aa, chain - ## HITS:1 COG:SMa2408 KEGG:ns NR:ns ## COG: SMa2408 COG3486 # Protein_GI_number: 16263715 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Lysine/ornithine N-monooxygenase # Organism: Sinorhizobium meliloti # 1 435 3 438 456 572 60.0 1e-163 MKKIDITGIGIGPFNLGLAALLSHHPEIKSVFLERKPEFRWHEGLLLQGTTLQVPFFADL VTMANPCHPLGYINYLHQHDRLHQFYYYDSFLIPRREYDHYCRWASKQLPDCRFGENVSH VEYDAKLDKFIIESESASGEKQKYISQNLAIGIGTKPRIPKWLETCKHPLVKHSAEFAKI QEQLKQCKQVTVIGSGQSAAECVLALFNSLTPEQVKAGASIRWITRSAGFHPMEYSKLGQ ECFTPAYMQYFQSLPRDKRRDIAASQGLIYKGISFSTIGDIYDVLYERSVAGEKSGLSLY TSCEVESVKELESGSLRLTCLHTQLDQRCELETDALVAATGYVHDWPEWFQNMKGSILAV DDKNDCIVQEDFTALRCDQGQGRIFIQNAEIFQQGVGSPDLGIGATRNSVIINQLLGRNA YRIPKQSSFQHYGLPE >gi|333032482|gb|GL891944.1| GENE 18 17045 - 19894 1915 949 aa, chain - ## HITS:1 COG:VC2209_1 KEGG:ns NR:ns ## COG: VC2209_1 COG1020 # Protein_GI_number: 15642774 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Vibrio cholerae # 1 425 7 438 453 340 42.0 7e-93 MQAACWFGRSGNATLGGVAAHLYAEFDGQFIDLQKLHLALQRLYKEHPILRLSLSADGIA NIMSEKTQQILEVDDFSKLSDYQIEQMLMQKREQWTHQKLDLSQGQTARFSISVLKNNIF RFHIDTDMIAIDPSSFLNLMEDLSLFYEDPEISFSRPPNFFDWYQKIRTDPDLKKLSQRD RLWWKQRLSHISPAPSLPFIHQEFKTAKSDRLSTWLSPKERTALQQLARKQHITVTNLIL GLFAYTLGHATKDHSFRLNIPTFWREPVLKNVEGTIGDFANLVILDVDMKGTTTLAAFCK QIANQMLELLEHSHYSGVNVLRDLSRYHGSAQIAPVVFTAALDLENNNLLSEHVRRVFGS MNWVISQGPQVALDAQVAHVDDGILVNWDIRLDALPKEWITNLFESFIHLLKNLAAHPEQ LNTQIISPAQNTSSDRTSQKPLNALQQAYLLGRTQALPLGGVAMQEFRQYHGKMDIVLLR QRLAEMVRQHDSLRTYIDKNRLIQYISDQVSVNLKEIDLTTWEPERASHHIQSYKNSYTH ELFDLNQSPWNITVFLLKNNLLTIFVRFDALILDGRSIASLMLELFDGQQHDIQTQIEEN EAENSLSVHHTDMAYWERKFSKLSAIPAFPWKTPLQHLPTSRYQRKSLVIEKDQFKQLSK IGAKHSLFKNSIIMAIILEVLSHWSTDKSLCVAVPTLPLYAGPFSNSSTFIAVEWKTSDQ FAEQANRLQTEVLEGLQHLSFSGVDLARLLFEKVGTAPVLPIVITNGLSWPVLSESHPIQ QLDGLTQTPQVAIDIRFSTRNDGALIFDIDYAQEAFPPNMIDDFLDALQLAIKQIIGSEI FSFDLSNFFSELQNKRLYFKNNESDHSSIPIENNAKQQNQLLDIYLEVIGHPPNMEVDNS THFTHLGLRPHHLKVVSKRINETYAIQLSPVQLIQCRNIADVEKLVTPH >gi|333032482|gb|GL891944.1| GENE 19 20149 - 21777 1293 542 aa, chain + ## HITS:1 COG:BMEII0078 KEGG:ns NR:ns ## COG: BMEII0078 COG1021 # Protein_GI_number: 17988422 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Brucella melitensis # 6 540 51 585 587 784 69.0 0 MKKQLIEFVRWSPERAQHYRNKGYWIDQPLTRILTVGVQSHPHSPAIICGERQLSYIELD RLSTNLASRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVVVLNALYSHRQYELNAF IKQIQPKLLIGSRQHEVFSNNQFIDSLHEVNLSPEIILMLNHQATDFGLLDWIETPAETL VDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICDLNSNTRLLCALPAP HNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQY KDQIQSLKLLQVGGASFPESLARQVPEVINCKLQQVFGMAEGLVNYTRLDDSDEQIFTTQ GRPISSDDEIKIVDEQYKEVPEGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGD LVQRTPDGNLRVVGRIKDQINRGGEKIASEEIEKLILLHPEVMHAALVAIVDEQFGEKSC AFIVSRNPELKAVVLRRHLMELGIAQYKLPDQIKLIESLPLTAVGKVDKKQLRSILNTST TS >gi|333032482|gb|GL891944.1| GENE 20 21795 - 22664 725 289 aa, chain + ## HITS:1 COG:BMEII0079_1 KEGG:ns NR:ns ## COG: BMEII0079_1 COG1535 # Protein_GI_number: 17988423 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate hydrolase # Organism: Brucella melitensis # 1 219 1 219 219 339 70.0 4e-93 MAISKISTYLMPERESYPNNKTDWQLDPSRAVLLIHDMQRYFLNFYDAESELIKTVVNHL VQLRTWAHQNNVPVVYTAQPYEQPAADRALLNAMWGPGLPASTIDQQKIIDQLSPAEHDI VLTKWRYSAFKRSDLLERMQNWNRDQLIIGGVYAHIGCMVTAIEAFMSDIQPFLVGDAVA DFSEEEHRLALKYVSSRCGQVVDTESVVGQVATGITRPWLEQKVQQLIEEDELDPEENLI LYGLDSLRIMQFSSELKAQGINISFEELGRTPTLSNWWSLVDARQRIAG >gi|333032482|gb|GL891944.1| GENE 21 22782 - 23933 705 383 aa, chain + ## HITS:1 COG:mlr6209 KEGG:ns NR:ns ## COG: mlr6209 COG0076 # Protein_GI_number: 13475187 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Mesorhizobium loti # 2 369 1 364 369 313 42.0 5e-85 MILSPADQERIETFWNYCLKHQYFNIGYPESADFDYSALFRFFKFSINNCGDWKDYSNYA LNSFDFEKDVMAYFAEIFQIPFEESWGYVTNGGTEGNMFGCYLARELFPDSTLYYSKDTH YSVRKIAKLLQMKSCVIESLDNGEIDYDDLIHKIKTNKESHPIIFANIGTTMTGAIDDIE MIQERLAQIGIMRRDYYIHADAALSGMILPFVDHPQAFSFAHGIDSICVSGHKMIGSPIP CGIVVAKRQNVERISVDVDYISTRDQTISGSRNGHTVLLMWAAIRSQTNLQRRQRIQHCL KMAQYAVDRFQAVGIPAWRNPNSITVVFPCPSEHIWKKHYLATSGNMAHLITTAHHRDTR QIDSLIDDVIFDLQGASKRTVGF >gi|333032482|gb|GL891944.1| GENE 22 24030 - 24185 82 51 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02575 NR:ns ## KEGG: ACICU_02575 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 51 1 51 51 75 100.0 7e-13 MQLKFLKKYFLYDFLIHAFLKPKKAILAGQLKRDFILSTAFSMNIKRDKHV >gi|333032482|gb|GL891944.1| GENE 23 24178 - 25788 1484 536 aa, chain + ## HITS:1 COG:PM1473 KEGG:ns NR:ns ## COG: PM1473 COG1132 # Protein_GI_number: 15603338 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Pasteurella multocida # 29 521 33 541 552 141 26.0 3e-33 MSDLKLSHLMTDSSLAPALKPAFPKLFAGTLAAVFSGLAILTALWGMIQLIGYLSSYWVI FSAVFWIVGAALAALASWLVHDAEAGFSARLRRQIAHHLIRLPNTTLSKQGDQNLKRLVS DDIATLHHMVAHLPSEIAIFAVIPLVSIILLIALVGPMALWVLLPGAIASLYYLIIVPHV SKRDGAARMQVMLDIIGSADDYARGIRDNRIYGQQSGALTAYIQSAQNFTQNMVSWVSKV ATLAAVATALLQAVATFAIAYFVAYQYDSMTLAATLFFSLAIVTPSLRLGHGLDYVAAGR AAASRLSAFLKEPVLSSGNLQKIEQDVTLEIVNASFAIENQKVLDRLSYAFPKNSITAIT GPSGVGKTTLLRALAGFAVLQEGVVQLAKTDILQLHEKLRHEKVLFIPQGGDVLPTTVRE NLSLSAVNANDAQLEQALLKAQLKVDLNADATLLSGGEKQRLGIARAFLSSAPIILLDEP TSALDQTNATKIILELSDLAKKQNKTIVMVTHDLALAAHADSRLVLKGPTDSGKSL >gi|333032482|gb|GL891944.1| GENE 24 25785 - 27380 1427 531 aa, chain + ## HITS:1 COG:YPO1913 KEGG:ns NR:ns ## COG: YPO1913 COG1132 # Protein_GI_number: 16122161 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Yersinia pestis # 55 519 63 544 600 170 29.0 6e-42 MNTPAKLNKDQIFSMLPRAAKQKLIIVGIGWIIVAAIEAIAYTVLAFAIVNQWSPSWVLI SAIAAILVTVIVTRAGFLTGVRLAGDLFAELGKSLARAKLSWFTNEQRAQIKTIAGQGIP GFMSIPAHQLQTFLHAPFMPLFLTIGIGLLAGAGVAFVALGLLLLSLFAQFLAQRALMHI DKKRNTADLAASQATLELVDHVELLRTAAGPERAVQRLEHRWEEQEETLVRINRAAAFAS FIATLASVLPIAGMATYLVIDGVNHAALVLALLVLIGRAAAPLGELATAGLHINDLFAAL RNFNQITHPPELPEPLHPQIPTGHHISVQDVSYAPALENISLDIALGSRVWVTGPSGSGK STLLELLTRFDDPQRGKITLGGIALDQMKYEDLVSNIAYVTQEPILFTSTLAENIRLGKP DATDDEIEKAARDAALGAMIDRSSEGINQSVGKQGTALSGGERQRVAIARALLKNAPILI LDEATSALDEETEQEIVTTIRALSSTVIFVTHRDSAIWQPTQTINLASTSV >gi|333032482|gb|GL891944.1| GENE 25 27453 - 28187 495 244 aa, chain + ## HITS:1 COG:alr2045 KEGG:ns NR:ns ## COG: alr2045 COG3208 # Protein_GI_number: 17229537 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Nostoc sp. PCC 7120 # 8 233 25 246 253 105 30.0 8e-23 MNKHQYNMFCLPPAGSSASIYHPWKKQISDNIRIIPIEYSGHGIKINEPLIDDPDLLAMQ IANEIQAYSDTPFILFGHSVGGGLIWKVLNYLNEKPIIDQLRLIVISSRPEHHYIQHMRY KHELTDEKIIDELKRYNNFPDEILNNQEALTFFLKIIRNDFYLSDQLLSEKIHKTEVPIV AFYGKQDPDIPNKRMMDAWQQHTENWLGSIEFEGDHFYFLNPETRVKMLENIAAIVETLT VNIE >gi|333032482|gb|GL891944.1| GENE 26 28198 - 28953 219 251 aa, chain + ## HITS:1 COG:AGl205GM KEGG:ns NR:ns ## COG: AGl205GM COG2977 # Protein_GI_number: 15890566 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 57 212 51 196 238 69 33.0 6e-12 MNTKKQLSRGANSCLDEINIQYEKLTAFGIDIHKVQLSEIKEIPQLDHIYQELNIFLPPN IKSSRFIRQLEFLTGRLAAKYALQRFNLQDSIVHQGKQGEPLWPEGVMGGISHVGSKKSC HAIAYVRNNTLKEKIFGIDIESQKHHIFFQKKDEFYDVFLNKNEQAEIEKLLKDQAYLYL VIFSAKESIIKAFYLKYKQIIDFKNIKFKALDGAFLYFYLRQESLIEITLEVKVYFFHTN NEIITISCIEN >gi|333032482|gb|GL891944.1| GENE 27 29078 - 30247 976 389 aa, chain + ## HITS:1 COG:BMEII0077 KEGG:ns NR:ns ## COG: BMEII0077 COG1169 # Protein_GI_number: 17988421 # Func_class: H Coenzyme transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Isochorismate synthase # Organism: Brucella melitensis # 8 380 44 411 418 247 37.0 2e-65 MMQTQISVEQNLDHIGQKKFSCFSTKNYYLEVNEFVKTLNTPAANTALLNEEIAKCFEEI KKQGHQNPVLIGAIPFDITKKSSLNFYADHKKITQSSSTINSLKNRNNIEIINKSLLIQR QKFEGTVQLALDAFEKKKVEKVVLSQAVEYEFNRHQEPENLLAALLKQNPNAYNFVIPVE HNNYILGASPELLLSKQGRIVTSNPLAGSRPKSQISEKNFVSQQELNHSEKDQHEHRIVV ENIIRNLATHCVELKVSEFPDILETSTMLHLSSEFQGVLKQQAPDALNLALELHPTPAVC GSPTHVAKQFILDHEGYDRHYYTGLVGWMDAEGNGEWVVTIRCGLLSENKMRLYAGAGIV EGSDAEAEWLETEAKMQTMLNILNTKVAV >gi|333032482|gb|GL891944.1| GENE 28 30368 - 31615 1367 415 aa, chain - ## HITS:1 COG:BMEI0196_2 KEGG:ns NR:ns ## COG: BMEI0196_2 COG1376 # Protein_GI_number: 17986480 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Brucella melitensis # 203 415 2 215 215 226 52.0 6e-59 MFVRSLLAMSLSCIIANVALAASTTEQPLNPNKVSAPVEDPIDPLAVDAASTVKAQAQTQ ITAQEQNDLNRASTTLQNLQKAEDQNADSGIAASTPVATAKTTTATASTATSAPAVTWTL DSLNNAEWYENIGKGQLPVYARAHVMLNNAHASPGAIDGMSGKNTLKAIASFQQMNGLSP TGELTKETWDALVAKQNKPAFIEYTITDADLKGPYAQSIPSDYALQAKMKGLYYTRVSEM LGEKFHIDEAFLKKINPTATFKKVGEKIIVPNVRNDLPEDIHLIIAHKGAKQLYLFNSRN QMIASFPATIGSTDTPSPTGTYKVVGVARNPWYSYSPSNFVQGNNLKPLSLPPGPNAPVG NIWIGLSKKSFGIHGTPNPSLISKTASHGCIRLTNWDANDLGNKVRSGVTVKFLE >gi|333032482|gb|GL891944.1| GENE 29 31915 - 32988 1371 357 aa, chain + ## HITS:1 COG:PM1734 KEGG:ns NR:ns ## COG: PM1734 COG0407 # Protein_GI_number: 15603599 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III decarboxylase # Organism: Pasteurella multocida # 1 355 1 352 354 491 65.0 1e-138 MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVT LQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKAD LDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHA LLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG RRIPVIVFTKGGGQWLEPMIASGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGS AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKYLG >gi|333032482|gb|GL891944.1| GENE 30 32995 - 33789 529 264 aa, chain + ## HITS:1 COG:CC0458 KEGG:ns NR:ns ## COG: CC0458 COG3739 # Protein_GI_number: 16124713 # Func_class: S Function unknown # Function: Uncharacterized integral membrane protein # Organism: Caulobacter vibrioides # 3 248 20 262 284 164 42.0 1e-40 MQYLFLPLQFIGKAVSAALFGILLLIAFALTASMGSHEYMGFYRYDYLLIYALIIQICLL YLKLESWAEAKVIALFHIMAMVMEIFLTHPAIASWQYPQPAVFKILTVPLFAGFMYSAVG SFFARSIRLLQVSFEKLPSFGSMLLLAFFSYINFMSKFFVPDIRYILFAISVFIFWKTKL YFQLNEHKFKIPMLPVLFTLAFLIWIAENISTFYKIWLYPSQVEAWHMVGWGKLGSWYLL LLLSLVLVLKILGHRDNQGNWNLR >gi|333032482|gb|GL891944.1| GENE 31 33935 - 34405 643 156 aa, chain + ## HITS:1 COG:no KEGG:ABSDF1152 NR:ns ## KEGG: ABSDF1152 # Name: not_defined # Def: putative signal peptide # Organism: A.baumannii_SDF # Pathway: not_defined # 14 156 14 156 156 255 100.0 4e-67 MLKKLALAALLAAGSSVAMADNDVGCGVGTQVWAGQKGVVPKILAATTNGIFTNQLLGIT FGTLGCRQGGTVTAQVVTFTNENAEALARDMAVGQGESLNVLAELMQIKPQDKDRFFKVS KANFGEIYSTNNQNTLQVLASLQNVMAKDEVLKAYV >gi|333032482|gb|GL891944.1| GENE 32 34467 - 36359 1744 630 aa, chain + ## HITS:1 COG:no KEGG:ABAYE1109 NR:ns ## KEGG: ABAYE1109 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 630 2 631 631 1243 99.0 0 MSLMKSVVLIFASLAVNIAYSAETNPSIQNYWSIAEQKKLDQDITWQRLMYANKNQKSEV TYAGYFLSENGKNNLKEELKADISALFIPTQDNQSIRCKFPARSQWLIQQLGIQENELPQ VKCSEFENWIGQIKPYKATLIYATDFMGNPSSMFGHTLLRLDPKDQQQLNLVSYAVNYAA TVAGNDNWSYAWKGLTGQYPGEYSLMPYYRKVKEYGDFESRDLWEYELNLSPEETRFLVS HIWEMQHVSFPYYFVSDNCAYRLLGLVDLVKPESHLQEKFNYASIPMETIKAMQQQGLTK APVYRPALETQLLAQAHQHGASLAKVAHQLAMKPIKESSETLKSFSPSDQAKILEMAYDD LYLQFIGRKVEESFAQPQLRQLLALRSQIDLDKQRQEPKRPSTEPTQGHNARNVSLKLGE VQGDKFIEIGHRQAYHDLIDPQGGYRAGTQLLFLNGNAQWRDDHLKLEHLDLLEVNSYNP IQPFKTPLTWGFNLGWRQEAVHDGVYNDEKQHGVASFNAQVGYSLADYERKYICYGQVQT YVQAGSNLDKGWRVGVGPTLGCMNQWLEKFNTVVQVELPYWEDQNQWNLRLNTQWQYAIN SNNAIRFNWDYEKQNHLDWMKSSLGYVWFF >gi|333032482|gb|GL891944.1| GENE 33 36427 - 37578 1038 383 aa, chain - ## HITS:1 COG:PA4110 KEGG:ns NR:ns ## COG: PA4110 COG1680 # Protein_GI_number: 15599305 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Pseudomonas aeruginosa # 1 383 1 389 397 337 41.0 2e-92 MRFKKISCLLLSPLFIFSTSIYAGNTPKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNN KKYEMYYGLQSVQDKKAVNSSTIFELGSVSKLFTATAGGYAKNKGKISFDDTPGKYWKEL KNTPIDQVNLLQLATYTSGNLALQFPDEVKTDQQVLTFFKDWKPKNSIGEYRQYSNPSIG LFGKVVALSMNKPFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFGYNQENQPIRVNPGP LDAPAYGVKSTLPDMLSFIHANLNPQKYPADIQRAINETHQGRYQVNTMYQALGWEEFSY PATLQTLLDSNSEQIVMKPNKVTAISKEPSVKMYHKTGSTTGFGTYVVFIPKENIGLVML TNKRIPNEERIKAAYAVLNAIKK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:35:36 2011 Seq name: gi|333032481|gb|GL891945.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld498, whole genome shotgun sequence Length of sequence - 37758 bp Number of predicted genes - 36, with homology - 36 Number of transcription units - 23, operones - 10 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 111 - 153 8.5 1 1 Op 1 1/0.600 - CDS 165 - 1085 1185 ## COG3485 Protocatechuate 3,4-dioxygenase beta subunit 2 1 Op 2 1/0.600 - CDS 1246 - 1536 467 ## COG4829 Muconolactone delta-isomerase 3 1 Op 3 . - CDS 1560 - 2666 1403 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily - Prom 2733 - 2792 6.5 + Prom 2673 - 2732 3.7 4 2 Op 1 . + CDS 2767 - 3681 625 ## COG0583 Transcriptional regulator 5 2 Op 2 . + CDS 3763 - 4557 945 ## ACICU_01954 hypothetical protein + Term 4572 - 4614 0.2 - Term 4473 - 4521 1.3 6 3 Op 1 3/0.400 - CDS 4625 - 5341 871 ## COG2186 Transcriptional regulators - Prom 5364 - 5423 3.4 7 3 Op 2 . - CDS 5425 - 6336 836 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase + Prom 6148 - 6207 4.6 8 4 Tu 1 . + CDS 6315 - 6704 280 ## ACICU_01910 hypothetical protein + Term 6751 - 6810 12.7 - Term 6744 - 6791 9.7 9 5 Tu 1 . - CDS 6822 - 6974 95 ## ACICU_01909 hypothetical protein - Prom 7001 - 7060 5.6 + Prom 6798 - 6857 6.5 10 6 Tu 1 . + CDS 7098 - 7238 87 ## ACICU_01908 hypothetical protein + Term 7281 - 7329 1.8 - Term 7367 - 7415 4.9 11 7 Op 1 3/0.400 - CDS 7434 - 8774 1195 ## COG0477 Permeases of the major facilitator superfamily 12 7 Op 2 1/0.600 - CDS 8784 - 9596 594 ## COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold 13 7 Op 3 . - CDS 9604 - 10893 1146 ## COG0471 Di- and tricarboxylate transporters + Prom 10877 - 10936 6.0 14 8 Tu 1 . + CDS 11005 - 11736 708 ## COG2188 Transcriptional regulators 15 9 Tu 1 . - CDS 11829 - 12707 786 ## COG3386 Gluconolactonase + Prom 12846 - 12905 4.9 16 10 Tu 1 . + CDS 13004 - 14347 1045 ## COG0477 Permeases of the major facilitator superfamily + Term 14559 - 14595 3.1 - Term 14386 - 14433 8.5 17 11 Tu 1 . - CDS 14448 - 15380 640 ## COG0583 Transcriptional regulator - Prom 15404 - 15463 4.6 + Prom 15366 - 15425 3.9 18 12 Op 1 . + CDS 15480 - 15914 363 ## A1S_1803 hypothetical protein 19 12 Op 2 . + CDS 15924 - 16382 443 ## COG3238 Uncharacterized protein conserved in bacteria + Term 16410 - 16463 5.2 + Prom 16507 - 16566 4.3 20 13 Tu 1 . + CDS 16586 - 17284 560 ## COG1414 Transcriptional regulator + Term 17311 - 17348 3.0 - Term 17302 - 17333 0.0 21 14 Op 1 . - CDS 17351 - 18670 1070 ## COG0477 Permeases of the major facilitator superfamily 22 14 Op 2 . - CDS 18742 - 19719 963 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 19883 - 19942 6.2 + Prom 19842 - 19901 5.1 23 15 Tu 1 . + CDS 19930 - 20607 630 ## COG0684 Demethylmenaquinone methyltransferase + Term 20704 - 20745 -0.1 + Prom 20629 - 20688 5.0 24 16 Op 1 . + CDS 20764 - 22032 724 ## ACICU_01893 putative DcaP-like protein + Term 22043 - 22077 1.2 25 16 Op 2 . + CDS 22094 - 22282 127 ## ACICU_01892 hypothetical protein + Prom 22413 - 22472 5.8 26 17 Tu 1 . + CDS 22558 - 25812 3571 ## COG1404 Subtilisin-like serine proteases + Prom 25841 - 25900 4.9 27 18 Tu 1 . + CDS 26018 - 26395 298 ## ACICU_01891 RTX toxin + Term 26426 - 26456 1.2 - Term 26401 - 26454 4.9 28 19 Op 1 19/0.000 - CDS 26476 - 27564 1113 ## COG1566 Multidrug resistance efflux pump 29 19 Op 2 . - CDS 27561 - 29138 1306 ## COG0477 Permeases of the major facilitator superfamily + Prom 29108 - 29167 5.9 30 20 Tu 1 . + CDS 29305 - 29925 423 ## COG1309 Transcriptional regulator + Term 29969 - 30011 9.0 - Term 29957 - 29999 9.0 31 21 Op 1 1/0.600 - CDS 30004 - 31581 1708 ## COG1012 NAD-dependent aldehyde dehydrogenases 32 21 Op 2 . - CDS 31598 - 33385 2020 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase - Prom 33412 - 33471 3.5 33 21 Op 3 . - CDS 33473 - 34648 1273 ## COG3970 Fumarylacetoacetate (FAA) hydrolase family protein - Prom 34670 - 34729 8.0 + Prom 34664 - 34723 4.4 34 22 Tu 1 2/0.400 + CDS 34760 - 35695 858 ## COG0583 Transcriptional regulator + Term 35704 - 35742 4.0 + Prom 35818 - 35877 5.4 35 23 Op 1 3/0.400 + CDS 35906 - 36877 949 ## COG0451 Nucleoside-diphosphate-sugar epimerases 36 23 Op 2 . + CDS 36911 - 37744 863 ## COG0477 Permeases of the major facilitator superfamily Predicted protein(s) >gi|333032481|gb|GL891945.1| GENE 1 165 - 1085 1185 306 aa, chain - ## HITS:1 COG:PA2507 KEGG:ns NR:ns ## COG: PA2507 COG3485 # Protein_GI_number: 15597703 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Protocatechuate 3,4-dioxygenase beta subunit # Organism: Pseudomonas aeruginosa # 23 306 27 307 310 285 54.0 1e-76 MNRQQIDALVKQMNVDTAKGEVDARVQQIVVRLLGDLFQAIEDLDIQPSEVWKGLEYFTD AGQANELGLLAAGLGLEHYLDLRADEADAKAGITGGTPRTIEGPLYVAGAPESVGFARMD DGTETGKIDTLIIEGTVTDTDGNIIENAKVEVWHANSLGNYSFFDKSQSDFNLRRTIFTD ADGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFVSAPGYRKLTTQFNIEG DEYLWDDFAFATRDGLVATAVDVTDPAEIQRRGLDHAFKHITFNIELVKEAAAAPSTEVE RRRASA >gi|333032481|gb|GL891945.1| GENE 2 1246 - 1536 467 96 aa, chain - ## HITS:1 COG:PA2508 KEGG:ns NR:ns ## COG: PA2508 COG4829 # Protein_GI_number: 15597704 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Muconolactone delta-isomerase # Organism: Pseudomonas aeruginosa # 1 95 1 95 96 114 56.0 6e-26 MLFHVRMDVHIPLDMPADKANEIKAVEKAYSQDLQRQGKWRHIWRITGQYSNISIFDVES NEELHNILQGLPLYPYMDIEVMALNRHPSSVRDDDS >gi|333032481|gb|GL891945.1| GENE 3 1560 - 2666 1403 368 aa, chain - ## HITS:1 COG:PA2509 KEGG:ns NR:ns ## COG: PA2509 COG4948 # Protein_GI_number: 15597705 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Pseudomonas aeruginosa # 3 368 7 372 373 374 53.0 1e-103 MYRTIETILVDIPTIRPHQLSVTTMRTQTLVLVKITTTDGIVGWGEATTIGGLNYGEESP ESVKANIDTYFAPLLTSVKDLNVAQTLKLIRKNINGNRFAKCAIQTALLDIQAKRLGVPL SEVLGGRLRNSLPVLWTLASGDTEKDIAEARKMIELKRHNTFKLKIGARPLQQDVDHVIA IKKALGADVSVRVDVNRAWSELECIHGIQQLQDGGIDLIEQPCAIQNTEALARLTLRFDV AIMADEALTGPDSAYRIAKNHGADVFAVKIEQSGGLIEACEVGKIAGLAGIDLYGGTMLE GPVGSIASAHVFATFETLAFGTELFGPLLLTEEILKEPLRYENFELHLPTAPGLGIEIDE DKIEKLRR >gi|333032481|gb|GL891945.1| GENE 4 2767 - 3681 625 304 aa, chain + ## HITS:1 COG:PA2510 KEGG:ns NR:ns ## COG: PA2510 COG0583 # Protein_GI_number: 15597706 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 289 1 285 290 186 38.0 4e-47 MELRHLRYFVTVVEEQSLTKAAEKLFIAQPPLTRQIKKLEEELGIDLFEKGSRPLKVTEA GLFFYQHAVQILTHTAQAASMAKKMKLVENVVKVGYVSSLLYGRLPQVIYLFRQKNPDIH VELIECGTRDQVEALKLGKIDLGFGRLPISDPAIKRLLLRKEKLKLAIHKKHPLSDFQES GIYLSQIINETIFSYPTTPKPNFSTTIQALFTKLGLVPAKLTEVREIHMALGLVASGEGI CIIPESACDIGMKNLTYLNILDLEAYSPISLSMRNMDQSSYIPKILDCIEEIYSEEEVSR NLNL >gi|333032481|gb|GL891945.1| GENE 5 3763 - 4557 945 264 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01954 NR:ns ## KEGG: ACICU_01954 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 264 1 264 264 495 100.0 1e-139 MRKILGIASLIMSTGVVHAEQLNEQEQISPYSANVTFASQYISRGFQQTWGKPALQIGFD YANPNGLFVGTWASNVSSNYLRDASVEWDFYAGYLKTIDKFSIGMSVFYYYYPGAKSTAE TGSTSYNYGEIVPQIGYGPLSLKYFITYTPDYAGYNSNTMGGPEGKRSRGTTYLDLNFTQ PINESWTFGAHYGYERIKNFSEANFQDMKVELIKDLGDGWTTGLAYTKAWDKDGYYRNYS NGESDAPISNPIHSTFTVAVKKVF >gi|333032481|gb|GL891945.1| GENE 6 4625 - 5341 871 238 aa, chain - ## HITS:1 COG:mll7194 KEGG:ns NR:ns ## COG: mll7194 COG2186 # Protein_GI_number: 13475993 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 12 230 23 242 263 144 38.0 2e-34 MSKADYKNPIPSKSQHALIVQQLGLKIVSGEISENEKLPSEVDLCEEYKVSRPVFREAIR VLNAKGLTYSRPKIGTVVRPKEEWHLLDPDVLFWLIQTTPEHEFFKTLSTVRRVLEPELA YIAASTANEEDIERIKQAYEGMEKATTVEEFIEPDIQFHLAIAKATHNDLLAYMSKMLVL PLQQSIQVTSLRPNLQGHSLPRHKAILTAIENKDPLSARHASLVQLDDTKMAYDLIKK >gi|333032481|gb|GL891945.1| GENE 7 5425 - 6336 836 303 aa, chain - ## HITS:1 COG:SMb20890 KEGG:ns NR:ns ## COG: SMb20890 COG0129 # Protein_GI_number: 16264932 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Sinorhizobium meliloti # 8 303 286 579 579 390 64.0 1e-108 MIVFPNPFAGRIGVDLQLDDWNRVGRGMPTIVDLQPSGRFLMEEFYYSGGLPAVIRRMGE ANLLPHPQALTVNGQTIWENCQQSPIYNDEVIRKIDNPIRQDGGMCILRGNLAPKGAVLK PSAATPELMKHRGRAVVFENFDDYKARINDPDLDVDETCILVMKNAGPKGYPGMAEVGNM GLPPKILAKGITDMVRISDARMSGTAYGTVVLHVAPEAMAGGPLAVVQNGDFIELDAYAG KLHLEVSDEELKQRLENLAPPAPPSFIGGYRKLYVEHVLQADEGCDFDFLVGCRGSEVPR HSH >gi|333032481|gb|GL891945.1| GENE 8 6315 - 6704 280 129 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01910 NR:ns ## KEGG: ACICU_01910 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 129 1 129 129 245 100.0 3e-64 MGWGKLSNIIKDIFSFGGSVIIHKTDADYSEESGRLAYDDIDSYSMVCDSRYGYLFGCSI SENEEYPEGIYLRLVNRKAKNPEEVYIFEPHEDEWQAKYVNQDLELALKLFKDIYEHGEL SFESKTIFE >gi|333032481|gb|GL891945.1| GENE 9 6822 - 6974 95 50 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01909 NR:ns ## KEGG: ACICU_01909 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 50 1 50 50 71 100.0 1e-11 MGAFSFTVMHSFIGTLIAFYLGTNTNFIEGSLGSKSDLDFEDYKDQFFYF >gi|333032481|gb|GL891945.1| GENE 10 7098 - 7238 87 46 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01908 NR:ns ## KEGG: ACICU_01908 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 46 1 46 46 78 100.0 1e-13 MKLLALISMGVAASYWYKTIKNSKPTLLKPNFDEIVKNFVLAEFKA >gi|333032481|gb|GL891945.1| GENE 11 7434 - 8774 1195 446 aa, chain - ## HITS:1 COG:RSp0182 KEGG:ns NR:ns ## COG: RSp0182 COG0477 # Protein_GI_number: 17548403 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 11 391 26 400 453 283 39.0 7e-76 MKNDISISEVEKSTIRKLSFRILPFLILCYFIAYIDRVNIGFAALTMNQEIGLTATAFGF GATLFFIAYVIFEIPSNMAMEKLGARIWIARIMITWGIVGCCTAFITGPISYAISRFLLG AAEAGFFPGVLLYLTLWFPKRYMARIVAVFMVAIPLSNFIGSPLSALLLGLHGLLGLSGW QVLLILEALPAILLGLLCLVWLPNTANNVKWLNQEEKEWLSSTLTFEKNQLLNSEKQDSA EQKKSKFKLLITNKYLWFFAIIYAGSSATSNILSLWMPQILKAFHLTAMQTGLLNMIPFG LAAAFMIVWGVHADKSGNKSLNTAIPLFVTSFGLLLTIFTSSLTLSLILFSLVLMGNYAI KGPFWALVSERLPPTLVAVGIAAVNTIAHIGTGLMNSIMGIVKDYSGSFPISLLPLCMLT FTGAMIALYLGRKPTLPKAQKVQKLV >gi|333032481|gb|GL891945.1| GENE 12 8784 - 9596 594 270 aa, chain - ## HITS:1 COG:RSp0233 KEGG:ns NR:ns ## COG: RSp0233 COG3618 # Protein_GI_number: 17548454 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase of the TIM-barrel fold # Organism: Ralstonia solanacearum # 4 268 38 302 302 221 43.0 9e-58 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQA MLNAIQQYPERLKGIAVVQHTTTFNELVNLKAQGIVGVRLNLFGLNPPALNTPDWQKFLR NVESLNWQVEIHAPPKYLVQLLPQLDEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSLLNV KQHWIKVSGFYRLGATPNNINIAQQAYNIFKEKGFLQKLIWGSDWPHTQHESLITYEDAI KAFKQIVFDKHEQCLILNQNPTELFGFSRT >gi|333032481|gb|GL891945.1| GENE 13 9604 - 10893 1146 429 aa, chain - ## HITS:1 COG:Cj0555 KEGG:ns NR:ns ## COG: Cj0555 COG0471 # Protein_GI_number: 15791916 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Campylobacter jejuni # 1 429 3 430 430 389 55.0 1e-108 MTALMLMALAVSIGLGYKTKINIGFFTIAFAYLIGCFGMGLKPSEVIELWPVKIFFIILS VTLFYNFALANGALEKLASHLLYKCRKFPQFLPLAIFFAATIIAGLGAGFYTVLAFMAPI TLLLCKKTNMNMIIGGMAANYGALAGANFMTSQSGIIFRSLMENTGITSQTAFSYSSGIF VLTLIIPIAVLGIYTLWNRKSNSIVIEDQKPEPFDKKQKQSIFLIILMMSIVLVFPILHL VFPDVKTISFLNSKIDIAFLAITFSLISLLMKLADEKKVIALVPWGTLIMICGVGMLIAL GVKLGIITTLSEWLANNVPVWVIPVLLCLISAIMSVFSSTLGVVAPTLFPIVPALALTSG LNPLVLFICIVVGAQSTAISPFSSGGSLIMASAPADIDKTKFFNQLLFKAIPVGVIAALI AIFALKFVM >gi|333032481|gb|GL891945.1| GENE 14 11005 - 11736 708 243 aa, chain + ## HITS:1 COG:RSp1506 KEGG:ns NR:ns ## COG: RSp1506 COG2188 # Protein_GI_number: 17549725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 9 242 4 239 240 172 39.0 5e-43 MLDETAFKNFKLPRYEKVRWELQKLLIQSKWTVEEPIPSEQELAQMYSVSVGTVRKAVEG LVEDGLLVKKQGKGTFLKQPNFENSLIRFFRLRNKKGEFIQPQGQIKKVEVCDAISEVNA ELGLGHTEKLLYIERVRKHEDVVVLSERIWLPERLFKNLEEIPIAEFGNLLYPFYYQHCG QFISSATERLTFEKNIKDSYLNNHLEDPLVKVCRIAKNLEGVAVEYRESYGLADNFHYEI TIN >gi|333032481|gb|GL891945.1| GENE 15 11829 - 12707 786 292 aa, chain - ## HITS:1 COG:CC1805 KEGG:ns NR:ns ## COG: CC1805 COG3386 # Protein_GI_number: 16126049 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconolactonase # Organism: Caulobacter vibrioides # 3 289 5 290 293 192 38.0 7e-49 MEIKVLVDVKTKLGECPTWDTVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFAL QENYNGAIVALEDGLYQLDFETGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLE DGNTASLYRLDADYKIEKLENNINTSNSICWSPDGTKLYFADTWQGEIWSYDYDLETGQI SNKTIFCKIDTSDGGSADGSTVDREGYLWNAKVYSGQLVRYRPDGQIDRIIEMPVKKITS AVFGGKNLDVLFVTSMSQPPLPRFPNDNQLRGSVFAIYGLGIQGIADARFMG >gi|333032481|gb|GL891945.1| GENE 16 13004 - 14347 1045 447 aa, chain + ## HITS:1 COG:PM0835 KEGG:ns NR:ns ## COG: PM0835 COG0477 # Protein_GI_number: 15602700 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pasteurella multocida # 6 440 5 405 405 87 23.0 5e-17 MSLKKVHRHSWVSLVICWIIWVVVAYDRELIFRAANMICNEFNLSPTQWGYTIAAITLSL AVLSIPVAALSDKHASGWKRGIFQWPLVIGFTFISLLSGITSLSSSFYKFVTLRIMVSLG CGVAEPVGVSNTAEWWPKEHRGFAIGAHHSGYPVGALLSGVAMATIITYFGPQNWRYAFF LGIIFAVPALTFWAIYSTRKRYSEFHQSCVDNQFTPPTDFVHDEGEEKTSTDSTWERLKQ TLSSRGIVFTAASTLITHVVYIGFLTIFPAFLYNIVGLDLAKSAGLSAVFTITGMMGQII WPTLSDKIGRRLTLILCGCWMAVSIASFCLISGVVSVIAIQLFFGLSANAIWPIFYATAS DYAPAGAIGTANSLITVAQYVGGAVAPIIMGYLLTSFGGWHSHQGYIWCFLLMSCCAFIG VILQIILGYLIKKEKSEQVDNLSLSAN >gi|333032481|gb|GL891945.1| GENE 17 14448 - 15380 640 310 aa, chain - ## HITS:1 COG:SMc00831 KEGG:ns NR:ns ## COG: SMc00831 COG0583 # Protein_GI_number: 15964529 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 12 309 7 297 298 190 35.0 3e-48 MDLTNSIDIRTLRFFISVYNAQNFSNVARKEDVSASMISRTIQQLEDALGQQLFYRNTRA ITPTESGKLFFEYAKRITEQFDEAQKALQDKTIEPSGLVRINAPVFFGQRHIAPWLAGLS ERYPRLLIELIQTDEFIDPLRESTDLIFRIGALTDSSFHARIFGTQKYHLAASPQYIAKY GTLDHPTELNQHKCLVYKGFEGPNRWLVRKPNEEWVHYPITPLLSSNNAESLMTAALHGM GIVLFPDWLIGEALKQGDLIKLLPEYEVAIKSHPQHIAAIYPNVRHPPLNIRAVIDYFTE IYGDTPYWQN >gi|333032481|gb|GL891945.1| GENE 18 15480 - 15914 363 144 aa, chain + ## HITS:1 COG:no KEGG:A1S_1803 NR:ns ## KEGG: A1S_1803 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 14 144 1 131 131 192 100.0 4e-48 MQILLLLLTILGGMGLSVEAGLLGPLGKEVGELWATFSIFGVGAALTFLLMLFFSPRNSP SFFTLPSWQLLGGVLGPAYVIILTITTPIIGIAMTMIGILAGQVSKSLIIDHYGLLGTPH RKVDRKRVVALIFIVVALVLVSKA >gi|333032481|gb|GL891945.1| GENE 19 15924 - 16382 443 152 aa, chain + ## HITS:1 COG:lin1173 KEGG:ns NR:ns ## COG: lin1173 COG3238 # Protein_GI_number: 16800242 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 3 141 10 152 155 59 29.0 2e-09 MTILMILLAVIGGALLSVQAAINGQLGAKVGVFRSAFLTFSVGALITALLIFYFEPKHTL TLLDVPKWQLLGAMCGVPYIVIMVLAVQRIGAAVATVAVIFGQLLMSILIDNFGWFGNET LPFSLYRLGALICLGIALYFIYSSSKDKKVEG >gi|333032481|gb|GL891945.1| GENE 20 16586 - 17284 560 232 aa, chain + ## HITS:1 COG:BH1819 KEGG:ns NR:ns ## COG: BH1819 COG1414 # Protein_GI_number: 15614382 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 13 226 5 248 252 77 25.0 2e-14 MVKIKPHPATSGNASADRLLTLLTAFRIGDKSLTLAELAERTELNKATIMRLIVSLEDFG FVNRLSDGRYTLASEVMRLNTIYQDALDLERHVMPCLQQLVDEIGETASFYVKHGAYRLC QYRINSTHRLRVHVQPGEVRPMDGAACAQALKSTYEQVLARTEPFYSTGVTEPHAAGMAL PVFDAQNEVVGALLISGPSSRFTAEVAKSVGDFFFKIADDLTKSLGGKSIRN >gi|333032481|gb|GL891945.1| GENE 21 17351 - 18670 1070 439 aa, chain - ## HITS:1 COG:RSp0182 KEGG:ns NR:ns ## COG: RSp0182 COG0477 # Protein_GI_number: 17548403 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 12 385 26 401 453 309 42.0 8e-84 MSTEYSQPSAIERETMRKVAWRLLPFLTICYVIAIIDRGNIGMASLQMNEDLGLTATAFG FASSLFFFAYFLFEVPSNLAMQKFGAKVWIARIMVTWGVISSATAFVENSTSLYIMRFLL GAAEAGFFPGVILYLTYWLPANYRARMVAIFMVAIPGANFLGSPLSGFLLSLDGWMGMRG WHWLFILEGIPAVLLGIACLFVLTDRPEQAKWLNSEQKSWLVERLQFERQQKTPIGHISL WQLLKNKYIWSMIIIYSGASAAGSTMSVWAPQLIKSFGLSNVEIGLVNAIPYGIASIAMI LWGRSSDRKNERLWHTAIALLMISFGLLIALFTSSLIGTIFLLSIVLIGAYSAKGPFWAL ASSWMSPTTTAAGLAAIGACANLIGGGMMVNIYGAIHDATGSHAIALLPLAALNLVSAIM VFIMSRKKAVLFTQPQSTS >gi|333032481|gb|GL891945.1| GENE 22 18742 - 19719 963 325 aa, chain - ## HITS:1 COG:AGpA470 KEGG:ns NR:ns ## COG: AGpA470 COG0111 # Protein_GI_number: 16119555 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 323 28 349 354 259 41.0 4e-69 MKRKVLITGPTLTSDALLYAQSHDIQLIPTEPYMAKDKMEKLIHDEQPDAIIVRTGKLSR DMIFASDNLKVIAKHGVGFDTIDTQAAAERKIPVTIAVGANAQSVAEHAFALMFNVARQV TWLDQRIREGHWDKASANGVELYGKTLGLIGLGAIGSILMKLVAPLNMKVKVYDPFLQNL PELDYVEQEHDFEKLIETSDIISLHCPLTAENKHLFSHSQFEKMKSSSILINTARGELID QAALVDALKNNKIAGAGLDTFSSEPPEKDNPLWELPNLVVTPHIGANTTDSRNRVGLLAL EQIMSIWNGQLLNPRAIANWKLLNS >gi|333032481|gb|GL891945.1| GENE 23 19930 - 20607 630 225 aa, chain + ## HITS:1 COG:AGpA472 KEGG:ns NR:ns ## COG: AGpA472 COG0684 # Protein_GI_number: 16119556 # Func_class: H Coenzyme transport and metabolism # Function: Demethylmenaquinone methyltransferase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 224 1 224 227 264 59.0 9e-71 MAIGFRVLKNDRKVEQKWIEQYRDLPVANVSDSMNRMTSGGAQLRPMHKKGYLCGPAITV KARPGDNLMLHYAIDIAEAGDVIVVDAGGDLTNALIGEMMVAYAIKKGIAGIVINGAIRD SVVIGEGEFPLFAAGISHRGPYKDGPGEINVPIAINGMVVEPGDLILGDEDGLLSVPYAE VEEIYLKASAKHAAEQKQLEQIAVGENDRSWVINSLKQKGCELPE >gi|333032481|gb|GL891945.1| GENE 24 20764 - 22032 724 422 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01893 NR:ns ## KEGG: ACICU_01893 # Name: not_defined # Def: putative DcaP-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 422 1 422 422 758 100.0 0 MKYKGIISLSLLMSITLQQAKAESEDNSVLNEKIIKLQQQIDYLMERQNLNQNNRLNKAP ELSPNKTSNTDKPVSADQTKIKFYGNIRVDAAYDFEGSTRSIANKTGSIPLDNSNSTSKS LNVSAATSRVGVDIVKPTSKGDLVGKLEADFMGSGGDNGNGSVRVRHAYISLGNWLIGQT TSPFVNSDTAPSLVDFTGAMGTGTQRNIQVRYQHIVDAKQKILVALEGGDVENKNVEGGS RFPALTMRYEFKNPNLLVQLHGMLHENRAISNANEEQTKLAWGAGLGTKFNLSGNDAIVF NYYHIAGDNRYMLYSKDNDAFYFDQNRMYLSEFDSVELGYMRKWNENLRSSLSVGSLVYK DSDFSENNPDQNKRLINASVNLFWTPVEKVDLGVEYTYGKRETFSNLEGKLSRINLLGRY NF >gi|333032481|gb|GL891945.1| GENE 25 22094 - 22282 127 62 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01892 NR:ns ## KEGG: ACICU_01892 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 62 1 62 62 92 100.0 4e-18 MEQINYANARSQFSKVMERVLLGYAVKITRKEKDAVVLISEKAYLEYKNAMFELNKLKNK DF >gi|333032481|gb|GL891945.1| GENE 26 22558 - 25812 3571 1084 aa, chain + ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 137 451 741 1051 1052 118 34.0 6e-26 MQNILTFIKNGQKFTLDASNIKSVRDTGNGFEITLKSGEIIQAESYSVTPNTQPVEQVSS QQVENNSEADEEFEKEEVLKEKSLLDSQTMLWGGAAIALGGIAIAASGSGGSDGSAPSDQ TPPASLTKILSKDGKAVSGLTEAGATVIVENSAGKVIGSAKAGADGTYLINLDKAYINGE ILKVSAQDTAGNSTVKQELIASDITAPTLTHAISSNGKTITGLTEANSTVTVKDSSGKII GTAKSDNDGKYTVILDKAYLNGENLSISAEDLAGNKSTIQTILADDKTAPIGLTVAIDTA GKFVTGVTEANAVVTIKNTVGTVVGTATADTAGKYSITLDKVYLNGESLSATASDQSGNA TAPKTIIAPDTTAPSSLTASIGTAGKVVTGVTEANAVVTVKNAAGIVVGTATADATGKYS VTLDKAYLNGESLSITATDKAGNATAPKIIVAPDITAPSSLTATIDAAGKAITGVTEANA TVTVKNVVGTVVGTGTADVTGKYSVTLDKAYLNGESLNVTAVDKAGNATVPKTIIAPDTT APSNLTATIDAAGEAITGVTEANAVVTVKNAAGIVVGTGTADATGKYSITLDKAYLNGES LNAIAADKVGNTTTPKTIIAPDTTAPSSLIATIDASGKVVAGVTEADARVTVEQVTAVYK EVTVLETQFILSESVQTNYLSKTYSFEVTGTNAHVSLNLSSSTNSLSGSYSSILSGASLN TRLTGNVSQAGEGNYSIDLAQGSVLPPGTYTLTVNYSSSMVPVINVNVTQEVPTTILEVD HYETKVVGTANADEAGNYSITLDKAYLNGENLIATATDQSGNKTEAKEVIVPDITPPILH QPTIQGGWTEGQVVQGTTEANVTVTIKNATGDVIGSAIADASGYYSVILNTVYENGELLK VIATDNKGNENLLQLNAPDTTAPILANLFSYDLSTDKIIFNAPSDSYFVEQKIDGAWVHV NIEEKFDWLNVEYRVTATDQAGNSSQPLTTIINTASGTYKPTDPTFTQIIKGSTGNDYLY GGNGDDTLISNGGSDSLYGGSGNDTLIYGGNSPNVYTGLIGEAGNDTYIVDKALPPPQLR SYLR >gi|333032481|gb|GL891945.1| GENE 27 26018 - 26395 298 125 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01891 NR:ns ## KEGG: ACICU_01891 # Name: not_defined # Def: RTX toxin # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 125 1326 1450 1450 221 99.0 8e-57 MGTFDNDVVETATANQTYSYTLDTGADTLIFKVLDDIDNLGGNSNGEWTDFNLSENDKLD LSQLLINNNGNLQEFITVKDTQAGVVMSVDRDGSNQSTYHSQELILLTAKHYTLEDLMAS NAFIH >gi|333032481|gb|GL891945.1| GENE 28 26476 - 27564 1113 362 aa, chain - ## HITS:1 COG:mll2590 KEGG:ns NR:ns ## COG: mll2590 COG1566 # Protein_GI_number: 13472330 # Func_class: V Defense mechanisms # Function: Multidrug resistance efflux pump # Organism: Mesorhizobium loti # 53 359 57 364 367 207 41.0 2e-53 MSTLEAQDHSMTESPKLTKMQYLKKHWVMVIAFIIVLVSILWILKVIFLPSSIVKTDDAR VDVEYSTIAPKVSGNIEEIYIKDHQTVKKGQLLARIDARDYQAALAEAESNYAKAQADLN EAMLAVERQPTVIRETEAQLRKVEAGIKLTKDNTARYEQLQALGAESRLITQQSKTTLTE QYADLDSSKEKVIDAQYQLNQYKIQVQAKQAALKQAQAALDKAKLNLSYTEIRAPIDGMI GQKSANVGNFVGAGNPLMVVVPLDQVYVEANFREIELKQIKIGQPVTVYVDAYNVELKGV VDSFSPSTGAFFSPISATNATGNFTKIVQRLPLRIKLLENQPDIKLLRPGLSVVVSVDTT KK >gi|333032481|gb|GL891945.1| GENE 29 27561 - 29138 1306 525 aa, chain - ## HITS:1 COG:PA2835 KEGG:ns NR:ns ## COG: PA2835 COG0477 # Protein_GI_number: 15598031 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 4 509 25 524 530 311 37.0 2e-84 MNIRPLIGLAGAIFAAMTVEFNNRISSITLVDIRGEMGISVDSGYWVSSIYASAMIIGMI LSTSWAVIFSMRRVLLFAIGLCLFSSVLIPFSPNIEIFYLLRGLQGLANGLTIPLLMACA LRFLGPEIRLWGLACYALTATFFPNLSAALAAFYLDVIGWKMIFFQTIPFCALSAALVYF GIPQDPLNYSRIKTYDWTGAILAIIGLASLSTMLLHGNHLDWFHSKLICVLALISAITLP LFLIHEWRYPTPLIKPQMLEIRNFGYAVIALFCFVVIGMSTSTLPLNYLSAVHGYKPTQT MWIGLQIAALQFIYIPIVIKVLNQAWVDSRYVHGFGLLLVMVGCLGASQLDTTWNQDQFY FWHAISCLGQTCVVLSLLMMGTNSVHPTMAIYASPMINTPRAISGVLGVCLLDWVNRVRG EYHSTRLIENTAQHVFQNIQGPVINPLTPPVLSADGTERVSGGLSALNSAIQAQQSVLVI SDQYLILAGLTAILFIVMVILPVRTYPPRIALIKLMNSHNSGKSL >gi|333032481|gb|GL891945.1| GENE 30 29305 - 29925 423 206 aa, chain + ## HITS:1 COG:RSp0443 KEGG:ns NR:ns ## COG: RSp0443 COG1309 # Protein_GI_number: 17548664 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 5 198 7 201 209 190 46.0 2e-48 MSDCTKTNEKDQKILDAATKFFLIHGFSGTTTDMIQKEAGVSKATMYGCFKNKEAMFAAV IERQCTNMQKQIMSVETKAKNLRSALTEIGKTYLCFILSHSGLAFFRVCIAEAVRFPELS EKFFEVGPQRLANIIAGYLEKSVKQGEIELTSSSEVAANIFLSLLRSDAHLKCLTHPDYL ISADEISTWVEYAVDLFLKNINYKLD >gi|333032481|gb|GL891945.1| GENE 31 30004 - 31581 1708 525 aa, chain - ## HITS:1 COG:PA2217 KEGG:ns NR:ns ## COG: PA2217 COG1012 # Protein_GI_number: 15597413 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 3 525 4 526 527 714 69.0 0 MTIIGHNFIGGSRSAQGTTLLKSIQATTGEALPYEFHHATEQEINQACEAASQAFKTYRH TTPEQRAVFLENIADELDALGTDFLEIVSQETALPLARLQGERARTSGQMRLFAKVLRRG DFLGARIDTALPERQPLPRPDLRQIKIGVGPVAVFGASNFPLAFSTAGGDTASALAAGCS VVVKAHSGHMATADFVAQAIERGVEKSNMPKGVFNMIYGNGVGEPLVKHPLIQAVGFTGS LRGGRALCDMAAARPQPIPVFAEMSSINPMLMLPEALKNRGDKIAQDLADSVVLGCGQFC TNPGLILGIKSAEFSQLISNLTEIMGAKPAQTMLNAGTLKSYTAGLEHLTEHQGIKHLAG QTQQGNQAQPQLFKADVELLLAGDQLLQEEIFGPTTVIIEVEDKAQLIQALQSMNGQLTA TLIADEADLTEFAEVVPVLEEKAGRLLINGYPTGVEVCDAMVHGGPYPATSDARGTSVGT LAIDRYLRPVCYQNYPQSLLPEALKDSNPLQILRLVNGEMTREAI >gi|333032481|gb|GL891945.1| GENE 32 31598 - 33385 2020 595 aa, chain - ## HITS:1 COG:BMEII0356 KEGG:ns NR:ns ## COG: BMEII0356 COG0129 # Protein_GI_number: 17988701 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Brucella melitensis # 10 595 26 615 615 798 64.0 0 MNDQNKRIFLRSQEWFDDPEHADMTALYVERYMNYGLTRAELQSGRPIIGIAQTGSDLTP CNRHHKELAERVKAGIRDAGGIPMEFPVHPIAEQTRRPTAALDRNLAYLGLVEILHGYPL DGVVLTTGCDKTTPACLMAAATTDIPAIVLSGGPMLDGHFKGELIGSGTVLWHARNLLAT GKIDYEGFMEMTTSASPSVGHCNTMGTALSMNALAEALGMSLPTCASIPAPYRERGQMAY MTGKRICEMVLEDLRPSKIMTKQSFENAIAVASALGASSNCPPHLIAIARHMGIELSLED WQRVGENIPLIVNCMPAGKYLGEGFHRAGGVPAVLHELQKAGVLHEDCASVSGKTIGEIA KNAKTSNADVIFPYEQPLKHGAGFIVLSGNFFDSAIMKMSVVGEAFKKTYLSDPNNENSF EARAIVFEGPEDYHARINDPALNIDEHCILVIRGAGTVGYPGSAEVVNMAPPAELIKKGI DSLPCLGDGRQSGTSASPSILNMSPEAAVGGGIALLKTNDRLRIDLNKRSVNVLISDEEL EQRRREWKPTVSPSQTPWQEMYRNMVGQLSTGGCLEPATLYMRVVNQDNLPRHSH >gi|333032481|gb|GL891945.1| GENE 33 33473 - 34648 1273 391 aa, chain - ## HITS:1 COG:AGc4970 KEGG:ns NR:ns ## COG: AGc4970 COG3970 # Protein_GI_number: 15889990 # Func_class: R General function prediction only # Function: Fumarylacetoacetate (FAA) hydrolase family protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 391 6 386 386 427 56.0 1e-119 MNFTLNSQNSLPDDATQGCLIGRAWIPSQISGPSPIILRGNQVFDISEKFHTISELLESA DPLKALSEIEGRRVGSIDELFANTIAEPDTNKAYFLAPIDLQVIKAAGVTFAASMLERVI EEQAGGDAQKAQSIREVVQGVIGDNLKTIEPGSEKALQLKEYLIEQKMWSQYLEVGIGTD AEIFTKAPVLAAVGTGQNIGIHPKSEWNNPEPEVVLVANSQGKILGATLGNDVNLRDFEG RSALLLSKAKDNNASCAIGPFIRLFDHTFTLNDIRTCDVELQIQGTDNFVLNGVSSMSQI SRDPEDLIQQTLNENHQYPDGFVLFLGTLFAPTQDREQAGAGFTHKVGDVVRIHSPKLGT LYNTVMTSDKATPWNFGINALMRNLKQRELL >gi|333032481|gb|GL891945.1| GENE 34 34760 - 35695 858 311 aa, chain + ## HITS:1 COG:PA2206 KEGG:ns NR:ns ## COG: PA2206 COG0583 # Protein_GI_number: 15597402 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 29 301 30 302 315 149 31.0 5e-36 MADLTYSSLNNWLKFKHLVLLETLARTNNMHLAAEQMNLSQPAVSKMLKEIEGLLGFQVF ERLPRNMPVTALGEHVIRYAQRVLNDAKHFVEDIEILRLGGHGFLKVGGIFAATAVVIPN SIIEIKKQWPLLSIDVVEQTSDHLMEMLSEHTLDLAIGRFTDVTQSQFFDFQPLGPEPFC IVVNNAHPCAQKKFCTLEELLKWPWVLYPKGTPIRERMEGAFARAKVKIPLNTVNTMSMQ TFLQILKGAPMVGMLPEAMVIDQVKEGQLQILETDLILDAQDYGILTRKDEPVSDIAAAF INILLKNAKRK >gi|333032481|gb|GL891945.1| GENE 35 35906 - 36877 949 323 aa, chain + ## HITS:1 COG:YPO2238 KEGG:ns NR:ns ## COG: YPO2238 COG0451 # Protein_GI_number: 16122466 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Yersinia pestis # 1 318 2 319 333 307 48.0 2e-83 MNVLITGGTGFIGKQIAKEILKTGSLTLDGKQAKPIDKIILFDAFAGDDLPQDPKIEVVI GDITDKTIVANITEKIDIVWHLAAVVSSAAEADFDLGMDVNLYGLLNLLEELRKKQTTPR VIFASGCAVFGGQLPEVVTDDTVVTPKSSYGMQKAVGELLVSDYSRKGFIDGRVLRLPTI VVRPGKPNKAASTFFSSIIREPLKGETAVCPVPPDTPVFITSPRRCVESMIKAASISSDA LQDNRIIPLPGLTVTVKQMLEALEKVAGKQATDLVQWQEDKTIQRIVQSWPVQVKAEYAE SLGFQADENFESIIQAHIEDTQN >gi|333032481|gb|GL891945.1| GENE 36 36911 - 37744 863 277 aa, chain + ## HITS:1 COG:BMEII1096 KEGG:ns NR:ns ## COG: BMEII1096 COG0477 # Protein_GI_number: 17989441 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Brucella melitensis # 4 271 26 286 451 252 46.0 6e-67 MEDIKNVTALEEQTIKRISSRIIPFLIILFIMAFLDRTNIGFAALHMNDAIGITQTIFGL GAGVFFLGYFIAEVPSNVLLHRFGARIWIARIMITWGIIAGLMGFIHSGTQFIILRFLLG IAEAGFFPGVIFYLTLWFPAKYRARVFATFYLGLPIAQIIGAPISVGLMQWGNTIGYEGW RLMYILEGIPSIILGLVCLKYLTNNPKEAQWLTAEQRQWLMNTLEREEREKEQSADAALT KGELIKQVFKNPLVWIMAIVYFGITSGSNAMFFVSVR Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:36:04 2011 Seq name: gi|333032480|gb|GL891946.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld500, whole genome shotgun sequence Length of sequence - 3087 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 1873 1807 ## ACICU_01060 Phage-related minor tail protein + Prom 1875 - 1934 80.3 2 2 Tu 1 . + CDS 2119 - 3085 754 ## ABAYE2698 bacteriophage protein Predicted protein(s) >gi|333032480|gb|GL891946.1| GENE 1 2 - 1873 1807 623 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01060 NR:ns ## KEGG: ACICU_01060 # Name: not_defined # Def: Phage-related minor tail protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 3 621 379 1000 1461 617 63.0 1e-175 AVTAATNAQTAAQTRLSAASSLVGSIGSRALGLIGGPIGAITLGVSALAATYTYFKGKAE EANRTLAEQAEVANRTAEELKGLKGEAKTKAINDLTTAFKAQNEELKKTEMAVGSALIDI QNYGKGNVELTRISNEARLGTISYKEAMEQLAKQKLPPSLRDALKEQIDKYNEAYEKADK TKTAIKLFGIEVTLTGNKAQNAAIEQQKHADAIKNTKQAADEAQKSLQKLYADKLWDTQF VEIVMKKGFSESQANDLLKLYKDSLAKGLKAADREAMKALTDTWKAEESIKAITDARTDS IREQNKELKNQQKVLSVNAKVLANASKFGFADLESKYKLPSGTLSAIHMIESRGNAKAYN KETGATGGFQFLEGTAKQYGVKDRTDLAQSAEGAAKYMSYLLKLFKGDLEKAVRAYHAGE GNVMKGKGIGKNNNQYWKDYQSYMAGINGYSAGDISSKDFDKLIQDTTKMAEEQAKLRLQ LENEVANQVTKIRNDLAKKLEDVDKANFNPERKAEIKAELQARADNDIAIAEQATKTKLD SFRDYTKTEEQILKDSYAKRQFEAEHDLDLTKDQRKEAVDLLAQQLKQELGLMQLAQEQR LFQARLSLLSETQAMQERYRLAS >gi|333032480|gb|GL891946.1| GENE 2 2119 - 3085 754 322 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2698 NR:ns ## KEGG: ABAYE2698 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 321 1023 1343 1435 515 94.0 1e-144 MNGTSEFFRQDQERFSRLNAANDLADSQFAATDLNEQNSLDGLDAQMEAGLIKQQDYENQ KTAIIQAAQDQRNQIAAEHAKNVQDIEDKYQQDRLNTQIAFGGQMMGSLTSMFGSMFGEQ SKAYKIMFAADKAYAIAAAGIAIQQNIAAASKAGFPLNLPLIAGAVAQGASIIANIRAIK DQGFAEGGYTGRGGKYEVAGAVHKGEIVWSQEDIKRWGGVGLVEKMRKSANPEAFLNNNA SADSVMRRAMMSSSAFIESQKQADIFNQPVQDTQIIYKGNRDTPKLASSANSDLFHDGKV YFSSNGIVQDRSNLDDVQDFTL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:36:33 2011 Seq name: gi|333032479|gb|GL891947.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld505, whole genome shotgun sequence Length of sequence - 53241 bp Number of predicted genes - 46, with homology - 46 Number of transcription units - 33, operones - 10 average op.length - 2.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 915 436 ## ACICU_00639 FilE 2 1 Op 2 . + CDS 935 - 2884 1679 ## ACICU_00640 FilF + Term 2898 - 2940 10.1 - Term 2885 - 2927 10.1 3 2 Tu 1 . - CDS 2940 - 3488 688 ## COG1051 ADP-ribose pyrophosphatase - Prom 3508 - 3567 3.9 + Prom 3381 - 3440 4.9 4 3 Op 1 1/0.444 + CDS 3612 - 4229 475 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 5 3 Op 2 . + CDS 4249 - 4779 671 ## COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily + Term 4802 - 4833 3.4 + Prom 4820 - 4879 5.5 6 4 Op 1 . + CDS 4912 - 5577 704 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 7 4 Op 2 . + CDS 5589 - 6380 863 ## COG0500 SAM-dependent methyltransferases + Term 6444 - 6488 -0.9 + Prom 6385 - 6444 5.2 8 5 Op 1 . + CDS 6517 - 7968 1260 ## ACICU_00646 hypothetical protein 9 5 Op 2 . + CDS 7937 - 8782 892 ## COG0627 Predicted esterase + Term 8939 - 8976 -0.7 10 6 Tu 1 . - CDS 8788 - 9060 331 ## A1S_0704 hypothetical protein - Prom 9106 - 9165 4.6 + Prom 9152 - 9211 7.5 11 7 Tu 1 . + CDS 9245 - 9931 956 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 10074 - 10114 6.4 + Prom 10069 - 10128 7.1 12 8 Tu 1 . + CDS 10288 - 11109 771 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 11118 - 11177 5.7 13 9 Op 1 . + CDS 11211 - 11606 333 ## ACICU_00651 hypothetical protein 14 9 Op 2 4/0.222 + CDS 11647 - 13581 1680 ## COG2132 Putative multicopper oxidases 15 9 Op 3 . + CDS 13568 - 14323 829 ## COG3667 Uncharacterized protein involved in copper resistance 16 9 Op 4 . + CDS 14352 - 15347 789 ## COG1230 Co/Zn/Cd efflux system component + Term 15360 - 15399 5.0 + Prom 15358 - 15417 7.5 17 10 Op 1 . + CDS 15497 - 15817 357 ## COG2076 Membrane transporters of cations and cationic drugs 18 10 Op 2 . + CDS 15829 - 16308 644 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Prom 16363 - 16422 5.2 19 11 Tu 1 . + CDS 16445 - 17665 1539 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) + Prom 17697 - 17756 3.1 20 12 Tu 1 . + CDS 17812 - 18876 1172 ## COG0379 Quinolinate synthase + Term 18883 - 18934 2.4 + TRNA 19019 - 19095 85.7 # Pro TGG 0 0 + TRNA 19152 - 19228 98.8 # Arg TCT 0 0 + TRNA 19262 - 19337 81.9 # His GTG 0 0 + TRNA 19342 - 19418 85.7 # Pro TGG 0 0 21 13 Tu 1 . - CDS 19595 - 20590 971 ## COG1816 Adenosine deaminase - Prom 20763 - 20822 4.8 22 14 Tu 1 . + CDS 20992 - 22167 1326 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 22191 - 22242 8.2 - Term 22184 - 22221 -0.0 23 15 Tu 1 . - CDS 22272 - 23219 777 ## COG0583 Transcriptional regulator - Prom 23281 - 23340 5.7 + Prom 23194 - 23253 5.8 24 16 Tu 1 3/0.222 + CDS 23474 - 24685 1421 ## COG1960 Acyl-CoA dehydrogenases + Term 24704 - 24745 5.6 + Prom 24777 - 24836 3.6 25 17 Tu 1 1/0.444 + CDS 24911 - 26059 1111 ## COG0477 Permeases of the major facilitator superfamily 26 18 Tu 1 . + CDS 26407 - 27636 1238 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase + Term 27693 - 27721 -1.0 - Term 27674 - 27714 6.8 27 19 Op 1 . - CDS 27741 - 28874 1013 ## ACICU_00665 putative citrate utilization protein B 28 19 Op 2 2/0.222 - CDS 28864 - 30270 1484 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit - Prom 30291 - 30350 1.8 29 20 Tu 1 . - CDS 30374 - 31303 687 ## COG0583 Transcriptional regulator - Prom 31327 - 31386 3.4 - Term 31388 - 31424 2.5 30 21 Op 1 . - CDS 31436 - 32230 776 ## COG0725 ABC-type molybdate transport system, periplasmic component 31 21 Op 2 9/0.000 - CDS 32323 - 33633 1528 ## COG0477 Permeases of the major facilitator superfamily - Prom 33839 - 33898 5.3 32 21 Op 3 . - CDS 33912 - 34814 930 ## COG0583 Transcriptional regulator + Prom 34918 - 34977 4.2 33 22 Op 1 . + CDS 35141 - 36526 1318 ## COG2067 Long-chain fatty acid transport protein 34 22 Op 2 . + CDS 36560 - 37927 1495 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 37932 - 37987 8.0 - Term 37916 - 37972 3.1 35 23 Tu 1 . - CDS 37984 - 38991 921 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 39023 - 39082 7.2 + Prom 39018 - 39077 7.6 36 24 Tu 1 . + CDS 39177 - 40232 755 ## ACICU_00674 hypothetical protein - Term 40247 - 40288 -0.5 37 25 Tu 1 . - CDS 40334 - 40942 481 ## COG1280 Putative threonine efflux protein - Prom 41106 - 41165 8.9 + Prom 41087 - 41146 6.5 38 26 Tu 1 . + CDS 41198 - 42070 676 ## COG0583 Transcriptional regulator 39 27 Op 1 . + CDS 42437 - 43423 794 ## ABSDF2729 hypothetical protein 40 27 Op 2 . + CDS 43445 - 44488 1133 ## COG0620 Methionine synthase II (cobalamin-independent) + Term 44512 - 44567 7.4 + Prom 44512 - 44571 3.1 41 28 Tu 1 . + CDS 44674 - 45165 605 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family + Term 45217 - 45253 0.1 + Prom 45591 - 45650 2.2 42 29 Tu 1 . + CDS 45743 - 46402 207 ## ACICU_00680 TetR family transcriptional regulator + Prom 46430 - 46489 7.4 43 30 Tu 1 . + CDS 46578 - 49265 1733 ## ACICU_00681 hypothetical protein - Term 49706 - 49755 4.2 44 31 Tu 1 . - CDS 49847 - 50710 654 ## COG0583 Transcriptional regulator - Prom 50740 - 50799 3.9 + Prom 50702 - 50761 3.5 45 32 Tu 1 . + CDS 50935 - 51828 572 ## COG0384 Predicted epimerase, PhzC/PhzF homolog + Term 51833 - 51879 -0.7 - Term 52070 - 52111 6.1 46 33 Tu 1 . - CDS 52143 - 53240 1487 ## ACICU_00684 hypothetical protein Predicted protein(s) >gi|333032479|gb|GL891947.1| GENE 1 1 - 915 436 304 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00639 NR:ns ## KEGG: ACICU_00639 # Name: filE # Def: FilE # Organism: A.baumannii_ACICU # Pathway: not_defined # 11 304 126 419 419 512 100.0 1e-144 PTAPTAPTAPQKTQKNTKTVSVVSDDLKTSPEKNKIIESGNAPSVSNNEWQKKLVLVPPP IKSTSQAAPSSDSSLDKSKFTTIDGVEYVNNEYLEDQEFNLEGKKRFYLMPDGLGRTESV ERKKGVSRSTLDQLFNRQTQDQDSTVVLAPTYMRLSSQELEAAFEQDKCFIKDYKKSIKT LSINKEVNLWPRKPLKEKFEYELVQLNPSVQHLKVISFASSNEKPLYYWPLVVFLDDKGC ILEGVSGFKSKSYPSTMLQHASIQGVLKVPPSAHYIMMTPLSSAVDVTEKELTNQGQIQI SVLR >gi|333032479|gb|GL891947.1| GENE 2 935 - 2884 1679 649 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00640 NR:ns ## KEGG: ACICU_00640 # Name: not_defined # Def: FilF # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 649 1 648 648 1217 99.0 0 MNKKILWPFALTTIALMLNGCGGGSSTINEDPNSGTNNGNLTSGSCTPTTSDNGAEDSTC LQFALDYPIAGINFDCSSATNFHYATKISGNAVIGSCKVGDTARFYIQSKDNKKVFLGNV NLDTIGKFTAVNGKSKEINPIYLRVLDLASGITGKAPTTLDKNDETIKVAIALIKIFQSI GVENGDNLIGDIQPTQLTDIKKDQLTKISQSVTATEFQNGAYASILKPWLDVNQISDDDA YKLLVQTTNLSNAGVFQSFNLFINSTILQNYQVFNGCNRSTQEECLNNTINLRHSTDDLY LLSDRQGYTLGYGLQWKGSAIVIDNKVQNPYLLTTKVKPAKLNVNAQNNWLNPVSREIQS TTPLRLSFSNNPNEDLQIYQGKFFNDYGVAGTEAFYKYLTKLSTGNPQHYGLWRQNVDGD NYNGVLSIIKSNPISYLERNVFKTSGNVKTGEKYIFPLYATLTFNFSDTTIQPVNLGIVI DEHGDIRTDIKPNSTTTDMSGQCATVSDASLIDNNGMQQYRIGTTAATFNDPLNGDQSVY VRMILSNPKFANIDGVMVGVTFVGVSPGPAKLNLFNLLANKVDSTSINFDNNTAWFNQHA AAQESYNMLKDVPAPTAADKALAQRKFGTVTIKLADQSIPACKAIKTKS >gi|333032479|gb|GL891947.1| GENE 3 2940 - 3488 688 182 aa, chain - ## HITS:1 COG:RSc1618 KEGG:ns NR:ns ## COG: RSc1618 COG1051 # Protein_GI_number: 17546337 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Ralstonia solanacearum # 1 162 1 162 195 197 51.0 1e-50 MSFCVACGHKTEQKIPLGDHKVRRVCTHCGNIHYENPKVICGALALWEDKVLLCRRAIEP RYGLWTLPAGYMELFETMEQGAARETREEAEAEIEIEQLYCMYNIPRIGQIYVLFKAQLK DGIFGAGEESIECRLFEEHEIPWGELAFPSVEHTLRHYFEDRKQQVFPTHLETLGTRLDH TG >gi|333032479|gb|GL891947.1| GENE 4 3612 - 4229 475 205 aa, chain + ## HITS:1 COG:PA3754 KEGG:ns NR:ns ## COG: PA3754 COG0494 # Protein_GI_number: 15598949 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 24 176 28 181 203 113 42.0 2e-25 MEEHLLTQKLQQRLRFSTRIQEAQAAVLIAITNENNPKVLLTRRSIHMNNHAGEVSFPGG KRDPSDTSNIVVALREAQEETALNPFDVQLLGDLPMQRARSGLSVKPIVGLIPPEVTLIP QPTEIDRIFFVPLQQLIETRPTPYEVRYAHQSLYFPSLQIDNEIIWGLTARMLIALFKYG LGYQKEWPFLLNAPTFGMPKFSHKK >gi|333032479|gb|GL891947.1| GENE 5 4249 - 4779 671 176 aa, chain + ## HITS:1 COG:PA3753 KEGG:ns NR:ns ## COG: PA3753 COG0663 # Protein_GI_number: 15598948 # Func_class: R General function prediction only # Function: Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily # Organism: Pseudomonas aeruginosa # 18 173 15 171 174 184 57.0 1e-46 MMYSYQGQHPKALHEPWDGWVAPTATLIGQVELGRQVSIWFGAVVRADNCVVRIGNFSNI QENSVLHTDAGLELNIGEYVTVGHKVMLHGCTIGDNSLIGMNAVILNRAVIGKNCIIGAN ALIPEGKVIPDNSVVMGSPGKIVKTLDEEGAAKIRLSALHYAEHFKSYTDLKEFHF >gi|333032479|gb|GL891947.1| GENE 6 4912 - 5577 704 221 aa, chain + ## HITS:1 COG:VC1989 KEGG:ns NR:ns ## COG: VC1989 COG1214 # Protein_GI_number: 15641991 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Vibrio cholerae # 1 214 3 233 237 135 39.0 5e-32 MKLLALETANEQCSISLIDETQELFFQLDTRAKAQTQTILPMIEQGLQQTGLDVAGLDAI AFSRGPGSFSGVRINAAVAQALAWSQDLPVVPVSTLQALAQAAYRLEGLEQVTAVLDARM NEVYIASFVLDERGIMQCIDEEKLMNYEQAAAYAKHCLIGSGAKLLQTDAEYQTITATAQ DIASIARVYAAQKQWVDAEHALPVYLRDDAWKKIADQGKTN >gi|333032479|gb|GL891947.1| GENE 7 5589 - 6380 863 263 aa, chain + ## HITS:1 COG:VC0073 KEGG:ns NR:ns ## COG: VC0073 COG0500 # Protein_GI_number: 15640105 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Vibrio cholerae # 74 261 98 284 292 124 42.0 2e-28 MHIYFEVDFQEQAQHYQAVLYSRGVTVDLQPIEKLNARFLRLNPDLALCVDENGLWLSAN GMKMQPDWKAEIPRLKRASLKSEMIARACQLGEKPVLVDATAGLGHDSLLMAYLGAQIQL VERHPILFTLLEDSKAQAQRDPFLSQFMDRIQLLFADSASYLQQLDQEAKTVDVVYLDPM FPQRDQNQQAIKKQAQVKKQMQLLHLLLPEDGEMDLGDHLLELAKKVAKRVIVKRPRHAI FLANQEPAHQWQGDACRFDAYFQ >gi|333032479|gb|GL891947.1| GENE 8 6517 - 7968 1260 483 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00646 NR:ns ## KEGG: ACICU_00646 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 483 1 483 483 974 100.0 0 MIDLKPSINFWHDFKSNQLAGMWLFLGSRRSLQIVHPSILQLIVWGVLGGCTNSLYSWLV AGQIGDFNSQGLIGYALWPFIALIVGIFLSQRINQPRLMLVPALLWLVLDTNILLIQCLI QYLGSNGYLNFIPDAIYNGILPGLFVALFVWQSLAVIWVFSRELKWPWWERALVMVATIA TMVVWQLSVKDQPIWKVEDSPPTFAEDAFYAQSKLLHDALEQVQYGELAKSHWYFLGVAG DSYQDVFKSEVVRIKEQFDTRFGTVGRSMMLVNNPDTRTEIPIASKTSIELALRRMGQQM NRDSDVLFLYMTSHGEQNHFEIENAPLDLGQVDPKWLRETLDKAGIRWRVIVISACYSGS FIPALQSPDTLIITASAADKTSFGCNNEADYTYFGRAFFDLAMREQSSMKDSFNAAKQTV TKWEVAQGVEPSEPQWMIGKNMELMLPQLEKYLFPQPNTGSVNIAQTQTEAKNDATPAKK PLL >gi|333032479|gb|GL891947.1| GENE 9 7937 - 8782 892 281 aa, chain + ## HITS:1 COG:RSc0604 KEGG:ns NR:ns ## COG: RSc0604 COG0627 # Protein_GI_number: 17545323 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Ralstonia solanacearum # 1 279 7 288 289 323 58.0 2e-88 MQLLQKNRCFEGEQRIYQFDSQLLKGSTKFGVYLSPAALEGKPCSTLFYLAGLTCTEETF AIKAHAQHMAAQLSLILITPDTSPRGEQVAVGDNWDLGQGAGFYINATQAPWSEHYQMES YLIDELYPLILKSFPVNAQQVGIFGHSMGGHGALTLAFKYPEKFKSVSAFAPICAPTECA WGEKAFSHYLGTDRESWLAHDATALVSKNGAVFNEILVDQGLDDQFYEQLHPEKFKQACL KAGQPLTLRQHAGYDHGYYFIQTFMDEHLQFHAIQLEKVSG >gi|333032479|gb|GL891947.1| GENE 10 8788 - 9060 331 90 aa, chain - ## HITS:1 COG:no KEGG:A1S_0704 NR:ns ## KEGG: A1S_0704 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii # Pathway: not_defined # 1 90 3 92 92 147 100.0 1e-34 MKSTTHLLTNDGKRIAKRLVNHWKHKFEVQETEQDFKILMPTATITLAPETEQLNVAIDS QLDDHNHLEKVVLDHLNRMAQQEFQVEWQH >gi|333032479|gb|GL891947.1| GENE 11 9245 - 9931 956 228 aa, chain + ## HITS:1 COG:PM1619 KEGG:ns NR:ns ## COG: PM1619 COG0036 # Protein_GI_number: 15603484 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Pasteurella multocida # 1 223 15 237 238 350 77.0 1e-96 MSKPYLIAPSILSADFARLGEDVDKVLAAGADVVHFDVMDNHYVPNLTFGAGVCKALKNY GITAPVDVHLMVSPVDRIIGDFLEAGADIITFHPEASHHIDRSLQLIKSGGAKAGLVFNP ATPLHYLDYVLDKVDQILLMSVNPGFGGQKFIPMTLEKLREARKIIDASGRDIRLEVDGG VGPANIREIAEAGADMFVAGSAIFGQPDYKVVIDQMRAELAKVGSVDA >gi|333032479|gb|GL891947.1| GENE 12 10288 - 11109 771 273 aa, chain + ## HITS:1 COG:ybiV KEGG:ns NR:ns ## COG: ybiV COG0561 # Protein_GI_number: 16128790 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli K12 # 1 272 1 269 271 219 41.0 3e-57 MTVKILAVDMDGTFLNSKKQYNKARFLKQYEQLKQNNIRFVVASGNQLAKLVTYFPEINH EIAFIAENGAHVVDAGQELAFAHLSKEQFVEILNAIDPVYTSKMVICGKQSAYVHSSMNA EDYAKVARYFEKLTVIDDFYALDDLVCKITFTAQENESFTIFEHFQKQSFVKDKVLVPVS SGFNFIDLILPDQHKAHGLKLLLQKWQVQPDQVVAIGDNNNDIQMIKAAGYGFAVENAVE ALKAVAPYTTANNEQEGALQVIDLVLQHQPPFA >gi|333032479|gb|GL891947.1| GENE 13 11211 - 11606 333 131 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00651 NR:ns ## KEGG: ACICU_00651 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 131 1 131 131 222 100.0 5e-57 MTLQHLRKYAWFVFLMTLVIGWSGVSIAQTPMQHDLHTMPCHSEQMKHHSMHIQADEQAT CHQSMSQVSHQHGKHCQDCNPVHCQMVNLALQQAIPDIESSFIPIPSQFSSIYQAQHLAG YWQEILRPPKA >gi|333032479|gb|GL891947.1| GENE 14 11647 - 13581 1680 644 aa, chain + ## HITS:1 COG:PA2065 KEGG:ns NR:ns ## COG: PA2065 COG2132 # Protein_GI_number: 15597261 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Putative multicopper oxidases # Organism: Pseudomonas aeruginosa # 22 617 40 628 632 472 45.0 1e-132 MSHKTISSLVAVFGLLVSPWTLAAIKEYHLNINEQQVNVTGKPLKRITVNGKFTAPLLEF EEGDEAVIRVHNQLKNQDTSLHWHGLLLPGLMDGVPGFNNFKGIAPNGDFVYRFKVKQNG TYWYHAHSKGQEQDGLYGPLVIYPKGKIPVAAHEKTDRDYVVMLSDFHDSSSDSIMKNLK KSAEYYQNRRETVSDVWKQVKAQGLKATWQDRSMWNQMRMLKTDMSDVTGYTFLVNGKTP QQNWTANFKAGDKVRLRFINASAMSFFDVRIPNLKMTVVSADGQPVKPVAIDEFRIGTAE TYDVIVEPKQPNYQIEAESIDRSGFAIGTLHNENTQAVGPVQMPIPRPRALLTMDDMGMS HGDGSNEHAGHQMNMQHDMSAMPEMKKETSQANHDHTVMKMDHDMKNMSSGEHDHSMMHM KHDMSAMSEMKHDMQAMSSSEHDHTMMNMNHEMPAQSENKSKKDEPVYGWANASTPAGMK ALQYSDLQSLTPQPDTRAPERELVIRLGGNMERYIWTINGKKFSDTIPLQVKYGERIRLK FVNDSMMAHPMHLHGMFMQLENGQQAENLPNKHTIIVPPGKTVTALLTADALGEWAIHCH LLYHMSAGMMNKLIVAQVNDGQQPAQSQPTVQSENEKGASHAHH >gi|333032479|gb|GL891947.1| GENE 15 13568 - 14323 829 251 aa, chain + ## HITS:1 COG:XF0133 KEGG:ns NR:ns ## COG: XF0133 COG3667 # Protein_GI_number: 15836738 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Xylella fastidiosa 9a5c # 33 244 114 319 324 91 27.0 1e-18 MRITKLFSQMICCGAFSGISVFAFAQEPLTHDHLREHGGQVYQATKIDTGWTQNEEGESS FSSELESWVGTDENKLFIKAHVEKAESEDANYGGSLLYSRNVADYWDVQAGVNYERLQRE DEKEDRWAGVVGLHGMAPYFFETDAYLYVGEDKLWKLSLETERDLLFTQKLIGKPYLKAD VVLQDESRYASKTGLSSLQAGFQTRYEINKKVMPFVDVGYGYEKGLKQTAWQTGTDSEHG WYYGAGLTLKF >gi|333032479|gb|GL891947.1| GENE 16 14352 - 15347 789 331 aa, chain + ## HITS:1 COG:NMA1988 KEGG:ns NR:ns ## COG: NMA1988 COG1230 # Protein_GI_number: 15794870 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Neisseria meningitidis Z2491 # 62 328 4 264 266 195 44.0 8e-50 MPLVYTDGIVFCVSYGAKMALEKQENQINVNKSCSSCGCSNVAAQDFSVASEPRVNKTQW VSYYHIPRMDCAAEEQMVRMALASYAEHIQELYFDLPARHLAVYHSTQDEKITQCLQRLG LGAELQQTQPHYEPIEKPKKVRPSSSTNAAQKQVLQWLLLINGVMFVIELMAGIIASSTG LIADSLDMFADAAIYGIALFVVGKNLDAQLKAAHLSGWLQFGLAIIVLIDVLRRFIYGSE PVSILMILIGGLALAANISCLYLMSDHKESGAHMKASYIFSANDVIVNLGVIIAGILVAI TGSRYPDLIIGLIIVLFVLNGARKILQLKNE >gi|333032479|gb|GL891947.1| GENE 17 15497 - 15817 357 106 aa, chain + ## HITS:1 COG:ECs5129 KEGG:ns NR:ns ## COG: ECs5129 COG2076 # Protein_GI_number: 15834383 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Escherichia coli O157:H7 # 1 104 51 154 155 95 51.0 3e-20 MAWAILILAGVFEVIWAYSMKMSEGFTRLTPSIITVVFMILSVVLLSISMKTLPLGTAYT VWTGIGAIGSFLVGIFFLHEPIGAMRMIAAVLIVSGLVLMKISSPS >gi|333032479|gb|GL891947.1| GENE 18 15829 - 16308 644 159 aa, chain + ## HITS:1 COG:PA0995 KEGG:ns NR:ns ## COG: PA0995 COG0350 # Protein_GI_number: 15596192 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Pseudomonas aeruginosa # 4 159 4 160 173 205 64.0 2e-53 MLLSYKYINSPVGQLKLVANENALVAVLWDNENPKRVRLAELVEQLEHPVLLKTEQQLQE YFEGKRREFTLPLDFEGTAFQKQVWTALLTIPYGETRSYKDIAVQIGNEKAVRAVGAANG KNPISIIAPCHRVIGAGGALVGFAGGLDKKDILLRLEQK >gi|333032479|gb|GL891947.1| GENE 19 16445 - 17665 1539 406 aa, chain + ## HITS:1 COG:PA4402 KEGG:ns NR:ns ## COG: PA4402 COG1364 # Protein_GI_number: 15599598 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Pseudomonas aeruginosa # 1 406 1 405 405 447 59.0 1e-125 MAVGDVTMPQMHVVKGVKIGSTEAYVRYPNRRDLVIFEFAEGSNVAGVFTQNAFCAAPVH VSKAHLAEGNPRYLVINTGNANAGTGPTGLKNAQDTCAKLAELAGVNSFEVLPFSTGVIG EQLPMERLLAGLQPALNSVQDAAWSDAASGIMTTDTVPKGASEQFELDGMTYTMTGISKG AGMIRPNMATMLSFVATDAPIRRDLVQKLLKTTVEHSFNRITIDGDTSTNDSCIFVATGQ AGGAEITSESDVRYAKVLEVLARVMNRLAQLIVRDGEGATKFITVAVEGGANTQECCDIA YSIAHSPLVKTALFASDPNWGRILAAIGYAGVKDLDVSKIQVWLDDVQICKDGGAAEDYT EEAGARVMAQTEITIRVDLGRGQAKDTVYTCDLSYDYVKINADYRS >gi|333032479|gb|GL891947.1| GENE 20 17812 - 18876 1172 354 aa, chain + ## HITS:1 COG:PA1004 KEGG:ns NR:ns ## COG: PA1004 COG0379 # Protein_GI_number: 15596201 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Pseudomonas aeruginosa # 14 353 9 345 352 499 74.0 1e-141 MSDATLIANDAKNIVQAHLDRLGEPKDNRLSEEAKQQKFAQIEAELKKRDAVLVAHYYCD PDVQELAEKTGGCVSDSLEMARFGRDHAASTLVVAGVKFMGETAKILSPEKTILMPTLEA TCSLDLGCPVDEFTAFCDQHPDHTVVVYANTSAAVKARADWVVTSSCAVEIVEHLDSLGE KIIWAPDQHLGRYIQKKTGADMLLWDGACIVHEEFRARGIANMKALYPDAAVLVHPESPE SVVEIADAVGSTSQLIKAAQTLPHQRLIVATDRGIFYKMQQAVPDKILVEAPTAGEGATC RSCAHCPWMAMNELDGILEVLQKGDQEIHVDPALAERAKMPLDRMLAFSASLKR >gi|333032479|gb|GL891947.1| GENE 21 19595 - 20590 971 331 aa, chain - ## HITS:1 COG:add KEGG:ns NR:ns ## COG: add COG1816 # Protein_GI_number: 16129581 # Func_class: F Nucleotide transport and metabolism # Function: Adenosine deaminase # Organism: Escherichia coli K12 # 1 329 1 329 333 507 73.0 1e-143 MITKTLPLTDIHRHLDGNIRIQTILELGQQYNLDLPAYDIESLRPHVQVMDNQPDLLSFL SKLDWGVKVLASLDACKRIAFENMQDAAQQGLDYVELRFSPGYMGMTHQLPLEGVVEAVI AGIKEGSQAYGVKANLIGIMSRTFGQEACEKELNALLAHKNDIKALDLAGDELGFPGNLF IDHFKKARDAGWHITVHAGEAAGPESIWQAIEELGAERIGHGVKAVQDLKLLDYLAKHQI GIESCLTSNIQTNTVPSLAEHPLKTFLEHGVLATINTDDPAVEGIEIQHEYLTAAPLAGL SPEQIYTAQENGLKIAFLSHQEKDELRQKYQ >gi|333032479|gb|GL891947.1| GENE 22 20992 - 22167 1326 391 aa, chain + ## HITS:1 COG:MT3829 KEGG:ns NR:ns ## COG: MT3829 COG1063 # Protein_GI_number: 15843347 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mycobacterium tuberculosis CDC1551 # 1 387 1 392 397 444 58.0 1e-124 MKSVLCHQATLQVVDQPNLTPAKGQVLLEVVRCGICGSDLHMQHHCDHMHDLAARVGFNG LAKSTDPFVLGHEFCGKVLDYGPKTRHKFKADTLVCAMPLLNVDQHGYLSTGLSPNASGG YAEQVLAQSSLMFEVPNGLDADSAAMTEPMAVALHAVRRSRVKTSEPAIVIGCGPVGLGV ILMLKAAGVKTVVASDFSPNRRKLAEQCGADIVVDPKETSPFANWKEFGLLGNVSDAINM GMGLFDKLQATRLPWWHGWRMIDKLGALPKRPVIFECVGVPGVLQQIIEGAPLFSRIVGV GVCMQSDKIEPALAINKELEIQFVLGYTPLEFRDALHMIAEGKVNCSPLITGVVGLEGVT NAFEALRDPEQHAKILIDPKRSGSDIQLMSH >gi|333032479|gb|GL891947.1| GENE 23 22272 - 23219 777 315 aa, chain - ## HITS:1 COG:PA0448 KEGG:ns NR:ns ## COG: PA0448 COG0583 # Protein_GI_number: 15595645 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 311 1 296 302 259 43.0 6e-69 MRKSIPSIQGLICFESAAKHLSYTYAAQELCITQSAVSRQIQQLEDFLGVELFIRTRHGV ELTIAGQQYFKSIKPYLLGLEKCTADVISHKGLGGTLKLGVVPTFATRWLLPKLHLLNQK HPEITVHLETSTKPFLFNDNIFDAAIFAGTQQQIDHWPGIQAHYLMDEEIVPVCSPRLIE KYFPDAVMINENTYDLSPEDLLKIPLLQQTTRPSIWQEWFLTHQMQHPKPFDGQRHELFS MLAVAASHDMGMALIPQMLIESELQKKELVIVSNKKLKGSRKYYLIHSSQDISPTIQKFV EWIYQELEQLKTNTN >gi|333032479|gb|GL891947.1| GENE 24 23474 - 24685 1421 403 aa, chain + ## HITS:1 COG:PA0447 KEGG:ns NR:ns ## COG: PA0447 COG1960 # Protein_GI_number: 15595644 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 8 401 4 392 393 691 81.0 0 MVTTKKAKVQFNWQDPFLIEQQLSPDERMIRDAAHAYCQERLQPRVLEQFRHETTDPSIF REMGELGLLGPTIPEQYGGAGLNYVSYGLVAREIEYVDSGYRSMASVQSSLVMVPIHEFG TEEQKQKYLPKLATGEYIGCFGLTEPDHGSDPGSMITRAKKVDGGYRLTGAKMWITNSPI ADVFVVWAKEVSAEGNVGDIRGFILEKGWEGLSAPAIHGKVGLRASITGEIVMDNVFVPE ENAFPEIRGLKGPFTCLNSARYGIAWGAMGAAEFCWHTAHQYTMDRKQFGRPLAANQLIQ KKLADMQTEIALGLQAALRFGRMKDEGIASVEGTSLIKRNNCGKALDIARMARDMMGGNG ISDEFGVARHLVNLEVVNTYEGTHDVHALILGRAQTGIAAFSN >gi|333032479|gb|GL891947.1| GENE 25 24911 - 26059 1111 382 aa, chain + ## HITS:1 COG:PA1019 KEGG:ns NR:ns ## COG: PA1019 COG0477 # Protein_GI_number: 15596216 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 34 381 22 366 451 380 54.0 1e-105 MNNDVQVISKELRNTFPSNLGTYERIGPHTWKWALLFAYFAMVVDGIDIMLLSYSLTSLK AEFGLTTFQAGALGSASLAGMGIGGILGGWACDKFGRVRTIANSVTFFSVATCLLGFTQS FEQFMALRFIGALGIGALYMACNTLMAEYVPTTYRTTVLGTLQTGQTVGYIAATLLAGAI IPDYGWRVLFFLTVVPAFVNIFLQRFVPEPKSWQLTKIESLQGNRQPKERVVAEKPKSSS IYKQIFNNFKHRKMFLLWMTTAFFLQFGYYGINNWMPSYLETEVHMNFKNLTSYMVGSYT AMILGKILAGYLADKFNRRAVFVFGTIASAVFLPIIIFFNTPDNILYLLITFGFLYGIPY GVNATYMAESFSTDVRGTAIGG >gi|333032479|gb|GL891947.1| GENE 26 26407 - 27636 1238 409 aa, chain + ## HITS:1 COG:BMEII1019 KEGG:ns NR:ns ## COG: BMEII1019 COG1804 # Protein_GI_number: 17989364 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Brucella melitensis # 1 405 3 409 415 550 64.0 1e-156 MGALQGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPRVGDDTRMWGPPWMPDQDGNMT RESGYFQCTNRNKYSVAVDITTPEGQALIYEIAKTADVVIENYKTGSLAKYGLDYASLSE LNPNIVYCSITGFGQDGPRAEEPGYDFIIQGMSGLMSITGEPDDVTGGGAQKVGVAVVDI QTGLYSTIAIQAALIARSHTGRGQYIDMSLLDVQVAALANQGMNYLASGKAPQRMGNQHP SIVPYQTFKAKDKEFIIACGNDKQFKDLCIAIGYPELLENEKFVRNQDRVKYRNELIPLL SEHFLRKTAKEWVDMIHALKVPVGVINSIEDALAEPQIVHRNLVVNIPHRLNENFQTIGS PIKLSDTPVEYRHAPPELGEHTTQILSRFKTAEELATLKEKGIIDGKIA >gi|333032479|gb|GL891947.1| GENE 27 27741 - 28874 1013 377 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00665 NR:ns ## KEGG: ACICU_00665 # Name: not_defined # Def: putative citrate utilization protein B # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 377 1 377 377 764 100.0 0 MNASTKALIPVVQLSDHEQEVQRALQICNACRYCESFCAVFAAMTKRLEFNQADIHYLAN LCHNCGACLHACQYAPPHEFGVNIPKAMAQVRLETYQEFATPQPLGQLYKSVGIPFVSTL TLIFFFCMLAVVWWKGTDLFAGYQGNFYAIFPHNFLALLFGATFTVAIVLLGIGISKFWR QTSKVIHGKVEKPDLVQATQNVLTLKYLDGGHGKGCNEQDDRYTQIRRVFHHLTFYGFML CFAATGVATLYHYFLDLHAPYPIFSLPVILGTLGGIGLVVGPAGLLYLNLKRHPLHGDRE QKPVDRGFIFLLLIVSASGLVLMAFRNTPYMALLLIFHLATVMTFFITMPFGKFAHGFYR SASLLKFAIEERISKKS >gi|333032479|gb|GL891947.1| GENE 28 28864 - 30270 1484 468 aa, chain - ## HITS:1 COG:STM0691 KEGG:ns NR:ns ## COG: STM0691 COG1053 # Protein_GI_number: 16764061 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Salmonella typhimurium LT2 # 1 467 1 465 467 767 76.0 0 MHDVIVIGGGNAALCAALTAKESGASVLVIEAAPKEWRGGNSQHTRNLRCMHDAPQDVLV DAYPEEEYWQDLLKVTAGKTNEHLARLVIRSTATCRDWMRKHGVNFQPPLSGALHVARTN AFFMGGGKALINAYYRSAQELGIEILYNTKIKDLKLNQGYFEAAIAEDGRVFKAKSCVLA AGGFESNLEWLREAWGQNENGEWPADNFIIRGTRFNQGNLLKFMIDQGADIIGDPSQSHC VAVDARAPLYDGGICTRIDCVSLGIVVNNKAERFYDEGEDFWPKRYAIWGRLVAKQPQQI AYSIIDSKAIGRFMPPVFAGVKANSIQELAEKIGLDAKTLYHTVEEFNQACVQGTFNHTV LDDCTTENIVPNKTHWAVPLDQPPFYAYALKPGITFTYLGLKVEDDAAVRFNNKPSRNLF VAGEMMAGNVLGQGYTAGVGMSIGTTFGRIAGKNAAHYALSQGVEHEC >gi|333032479|gb|GL891947.1| GENE 29 30374 - 31303 687 309 aa, chain - ## HITS:1 COG:STM0692 KEGG:ns NR:ns ## COG: STM0692 COG0583 # Protein_GI_number: 16764062 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 306 1 305 308 264 46.0 2e-70 MELKQLKYFIAVIESGSLGKAAKNLDIGTSALSQQISKLESELSIRLLQRTALGTVPTPA GLAFFQQVQLALRHLDHAIDSAHSSRLSGHVTVGFSPSVAAVIGTHFLKLMRNRYPDIKV RLIEGLSGDLKALVNARQLDVAIIFSDDVDPQWAIQPLVKEQMFLISPKEVLGQYHLESC IDTQTITHLQLKELPLILPSQRHGLRLLLEQKIHQLKVAYEIDGLHLLMESISQLEMATI QPAGASLNSRQDLCLLRVVEPAIERINYLISLSEEELSPATLATKVVIRACITNLINEKR WSGAELINT >gi|333032479|gb|GL891947.1| GENE 30 31436 - 32230 776 264 aa, chain - ## HITS:1 COG:YPO0080 KEGG:ns NR:ns ## COG: YPO0080 COG0725 # Protein_GI_number: 16120431 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdate transport system, periplasmic component # Organism: Yersinia pestis # 26 262 47 272 272 105 32.0 1e-22 MKKSPIFITICLAGAGLGSTFANADTLEVISSGGFYSSMEKLIPIFEKQTGHTVHLSSGS SMGESPTAIPNRLNRGERFDIVVLAAPELSKLAEKGYVDPNSQSALVNSSIGMAVPKGAP KPDISSAAKFEKVLLNAKHIGYSASASGTHLEKDVFPSFPPVEYKVISSKAEKVVGDRVA KRIAEGQFDIGFQQISEIKPFTGKYGQVELVGPIPAPYQKVTVFAAGIGKNSEHAKVAKE LIKFVKSPQATQIIEEQGLEQVKE >gi|333032479|gb|GL891947.1| GENE 31 32323 - 33633 1528 436 aa, chain - ## HITS:1 COG:STM0689 KEGG:ns NR:ns ## COG: STM0689 COG0477 # Protein_GI_number: 16764059 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Salmonella typhimurium LT2 # 6 416 9 419 434 502 63.0 1e-142 MDVVNNRRATFKKILNVTSGNFLEQYDFFLFGFYATYIAAKFFHSDNEYVSLMMTFTVFA AGFLMRPLGAIFLGAYVDKVGRRKGLIVTLSLMAIGTILITFVPGYETIGIIAPILVVIG RLLQGFSAGVESGGVSIYLAEIATDKNRGFITSWQSGSQQIAVVFAALLGYWLNTILTHA QVGEWGWRIPFLIGCLIIPLIFLFRRTLEETEDFKAQKTHPSSKEIFSTLVSNWRIVLAG MMMSAMTTTTFYFITVYTTVYAKRTLEMSVTDSLLATVFVGLSNFFWLPMGGLLSDKIGR RPVLVGITTLAIFTSYPVLSWLVSDISFSNLLITLAYFSFFFGMYNGTMVATLAEVMPKR VRTVGFSLAFSLAAAIFGGMTPMACTFLVENTGNASTPAFWLMLAAVCSLISSLYLCRGS KQKDPDTIAEPAKVSA >gi|333032479|gb|GL891947.1| GENE 32 33912 - 34814 930 300 aa, chain - ## HITS:1 COG:STM0692 KEGG:ns NR:ns ## COG: STM0692 COG0583 # Protein_GI_number: 16764062 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 3 294 12 301 308 235 43.0 7e-62 MTVVESGSIGKAAQKLDVGASAISQQISKLEQELSIRLLQRNAFGVTPTPAGLAFLKHSQ LILRQVNFAIDAAHSARLSGHVSLGFPPTITALIGIPLMKLMSERYPDIRLEIVETLSGN LIQSINSRQLDIAIIFTNEIDKQWSIQPLVREQMYLMARKEVLEKYGLSECIKSGIIQSQ QIGDIPLVLPRQRHSLRKLLEHKIGQLNVVYEIDGLHLLMDSLIHLDLASVRPGSACLQE YKHKLQLLKVVDPEVERINYLVSLAEEELSPAALAAKSAIKACVKELIQNQIWPCSEIIL >gi|333032479|gb|GL891947.1| GENE 33 35141 - 36526 1318 461 aa, chain + ## HITS:1 COG:mll1103 KEGG:ns NR:ns ## COG: mll1103 COG2067 # Protein_GI_number: 13471196 # Func_class: I Lipid transport and metabolism # Function: Long-chain fatty acid transport protein # Organism: Mesorhizobium loti # 204 440 207 415 435 89 30.0 1e-17 MNFVVNKKIFILGIASICTSTLHAAAFDKTGQSVAAFLQLGNYFEASLGITDADLSGVES GTNPSHHSISDIANTDYRPTAALKLQLALQYSFGLLYDQPFGADTEYSGVNGFVATPKDT VMLPGITTTGLASATLGHAPTGNAKSEFDIQNLSFILGYQPTKNWNLYAGPVYQTFKSQV ELRGNVFSLYNGYDFHTKTVSDLGWLAGLAYQIPEKAVKVSLTYRSAITHKVNATENAPL IDMLSTQQGRDLVNQHLDYMISIGQMTPQKKAYLNQIIANLPEQEDTGTTKFKSPDSVNL EFQTGLRQGTLLFGSLRWVNWSDLALQPYRFGEISKVVGVLSTPSRPEGFNLVRYYDDQW SLNLGLGQRFSPKWLGSVSVGWDSGAGDKVSTGGPTKGYYNLGVGAQYSPTSQYFISGGV KYYWLGDAKAQLGAQAGSDYYVGEFKDNHSVSYGLKIGYKF >gi|333032479|gb|GL891947.1| GENE 34 36560 - 37927 1495 455 aa, chain + ## HITS:1 COG:CC2809 KEGG:ns NR:ns ## COG: CC2809 COG1473 # Protein_GI_number: 16127041 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Caulobacter vibrioides # 33 452 1 412 413 259 36.0 8e-69 MNKIIKNGMFLGLSTLISGYGTLLHAEASPTNLPVVSQKALTIIDGQTEWLNKVYKDIHE HPELGFMEKRTSAIVAKELKSLGFDVKTGIAKTGVVGILKNGEGPTVMYRADMDANTVEE ATGLPYASKVRVKLDDGTETPVAHMCGHDAHMTWMLSMAKTLVALKKEWNGTVILVAQPA EEPITGAKAMVTDGLWTKYNLPKPDYFFAVHTTPAPVGVVINAPGPRMAGTDQLDVLFKG VGGHGSLPMLTKNPISMAANAVTQYQTIMGNAVDPQQAAVLSIGSIQAGNSNNVIPSTAL VKMNLRWFDPKVRETMLNNIKSMSEGAAQMQGMGKDQLPTFTFKGSSTPVVNNKEFSARL NGPLKALLGDKHVLTEYPAVMGSEDVHHLLGDQKDIPFNFMFIGVADPVVFANAVKQGKP VPYIPHSPNYIVDLKALPVGAKVTTVSMLELLTKK >gi|333032479|gb|GL891947.1| GENE 35 37984 - 38991 921 335 aa, chain - ## HITS:1 COG:PA3215 KEGG:ns NR:ns ## COG: PA3215 COG2207 # Protein_GI_number: 15598411 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 1 330 1 331 337 213 36.0 6e-55 MPQTATALASWVKAIQKALEKAGVDSQPLLEQAGLDIQALSNPDARYSLKQTANLWKLAV QKTQDSCFGLKVASQVNQNTFHVLGHSLITSTTLKEMFLRIIRYFRVVTDIPELEFYGQG NNHYFVIHVPDEVQPESIDAFISVFIRSSRALQGSVFSPLRIELRRSEPEDLETFQNILK APIVFNAPKDMIVFDTATIEQPLEGANPTLTQEYDEIINRYLARFDKENILARVKVKLIE KLSTGDFQQQEIAKSLGLSIRSLQRKLSAENTSYSELLDDTRHELALSYIKNTGHSVTEI AYILGFTDVSSFTRAFRRWTDLSPIHYREKYLACS >gi|333032479|gb|GL891947.1| GENE 36 39177 - 40232 755 351 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00674 NR:ns ## KEGG: ACICU_00674 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 351 1 351 351 683 100.0 0 MTYIYKNPAGMTDSEKTEHIKKVVTAEGVALRKRHPILNHQNAIGAMILFISLVGMIATA VLYINHQLSAWFAIPIIAFFASLTHELEHDLIHWMYFRKKPWAHHLMMGLVWLARPSTIN PWKRRELHFNHHKNSGTEVDLEERALTNGEQWSIRRLIAIGDNGLAVLFRIISASNWTVR KVIFKRAFMAYFPLGIIHWSLWYIFLGFHAVDAVLSWANAPIAWSATTLNIMHVVNILTV VWVAPNVLRTFCLHFVTSNMHYYGDVELGNVIQQTQVLKPWWMMPFQLFCFNFGSTHAIH HFVVKEPFYIRQMTAPVAHKVMRDMGVRFNDVGTFKRANRWNINDLSESKS >gi|333032479|gb|GL891947.1| GENE 37 40334 - 40942 481 202 aa, chain - ## HITS:1 COG:PA2929 KEGG:ns NR:ns ## COG: PA2929 COG1280 # Protein_GI_number: 15598125 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Pseudomonas aeruginosa # 1 196 1 199 204 127 39.0 2e-29 MAEFIAVILITILAVISPGADFAIVTKNSYLYGRKIGVFTSLGISLGVLVHVTYTLVAVA FVMTYTPQILNIVKYIGALYLIYIGYKTFTQKPVLDSAALNSIGTLQAIKYGFFTNALNP KTTLFVISTYTQIVSLTTPKTILLAYGFFMSFAHFVWFSLVAVLFSSILLRQKMLAKQVQ INRVIGSILCVLGVILLFTKFQ >gi|333032479|gb|GL891947.1| GENE 38 41198 - 42070 676 290 aa, chain + ## HITS:1 COG:PA2930 KEGG:ns NR:ns ## COG: PA2930 COG0583 # Protein_GI_number: 15598126 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 6 279 20 303 308 134 31.0 2e-31 MIERISLNSLKFFYFVAKYGSVTLAAKKLFVTQSAVSKQIYNLEEALNTTLFDRKNKTLV MTEQGETLLSCCHQVFGQLDECLIQLSQPKTQNKQLVLSCEPTLSMKWLIPRLSKFKKLG HDFEVVLLTAGGVVDFEKDNIDIAIRRNDFDWGEHIYSEKIADEYIALVQATKPSETNDL LISTSRPNFFKNMSRIAELKQSLKGYTKVELEHFYLCLEGCLAGLGATVISIYMIEKELE WNLLQKNSPIVQDGSAYFLLSHRAFEEDPRKTLFLEWLKAEMNESQHTLL >gi|333032479|gb|GL891947.1| GENE 39 42437 - 43423 794 328 aa, chain + ## HITS:1 COG:no KEGG:ABSDF2729 NR:ns ## KEGG: ABSDF2729 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 328 50 377 377 636 99.0 0 MSKEFTFTIKSICFDENYRPADNTRITTNFANLARGMSREENLRNTLRMIDNRFNALAHW DNPKGDRYGVELEIISVEMNIDAENRTSGLPLIEILKTNIVDKKTNERIEGIVGNNFSSY VRDYDFSVLLLDHNKNKSTFSTPEKFGELHGNLFKSFINSETYKANFKKAPVICLSVSTS KVYHRTENEHPVLGVEYKQEDYSLTDEYFQKMGLKVRYFMPPHSVAPLAFYFTGDLLSDY TNLELISTISTMETFQKIYRPEIYNANSVAGKSYQPSLKHQDYSLTRIVYDREERSRLAI EQGKFVEEQFIKPYQAILEQWSANYAPN >gi|333032479|gb|GL891947.1| GENE 40 43445 - 44488 1133 347 aa, chain + ## HITS:1 COG:AGl2018 KEGG:ns NR:ns ## COG: AGl2018 COG0620 # Protein_GI_number: 15891128 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 341 1 341 342 639 89.0 0 MKKLLPTSTAGSLPKPSWLAEPEKLWSPWKLENEGLVEGKKDALRLALHEQKLAGIDIVS DGEQTRQHFVTTFIEHLNGVDFEKRETVRIRDRYDASVPSVVGAVSRQKPVFVEDAKFLR QQTDQPIKWALPGPMTMIDTLYDGHYKSREKLAWEFAKILNQEAKELEAAGVDIIQFDEP AFNVFFDEVNDWGIATLERAIEGLKCETAVHICYGYGIKANTDWKKTLGSEWRQYEEAFP KLQTSNIDIISLECHNSRVPIDLLELIRGKKVMVGAIDVATNQIETPEEVANTLRKALQF VDSDKLYPCTNCGMAPLSREVARGKLNALSAGAEIVRRELTGYDLTA >gi|333032479|gb|GL891947.1| GENE 41 44674 - 45165 605 163 aa, chain + ## HITS:1 COG:AGc4534 KEGG:ns NR:ns ## COG: AGc4534 COG1853 # Protein_GI_number: 15889761 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 154 20 171 174 152 53.0 2e-37 MVQATDFRNAMSLLTSAVSVVTTAGMSGRFGFTASAVCSVTDTPPTLLVCMNQAASSHAH FLDNKILTVNVLGAHHEHISKAFSSKLTPEERFKHGEWIELETGAPVLEDALVSFDCEIE QIQQVGTHTIFICPIVAIKQSQHDQSLVYFNRAYHQVGQTETV >gi|333032479|gb|GL891947.1| GENE 42 45743 - 46402 207 219 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00680 NR:ns ## KEGG: ACICU_00680 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 219 1 219 219 428 100.0 1e-118 MCQAPSYGFAVPFFSQKGTGFLSHLETTRIYNGKTMPTLEIPSKKLQVVQTAIQLFTTHG FHNAGVDLIIKEAKIPKATFYNYFHSKERLIEMCIAFQKSLLKEEVLSIIYSSRYYTQKD KLKEIIVLHTNLNSLYHLLLKAVFEIKRLYPQAYRMAVEYRKWLHRELFDLIFSCETRAF KFDADMVLNLIDGLMLQVLSSKNLDERDVVLEKFWGQVL >gi|333032479|gb|GL891947.1| GENE 43 46578 - 49265 1733 895 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00681 NR:ns ## KEGG: ACICU_00681 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 895 1 895 895 1734 100.0 0 MNIEICTPNSATTKDKGDLLEKLSKNMLEAQNYHVDEEVRKTGSELDLLCKHNVSKKKIY VECKAYRDKKIDATIIRQLLGTVVFEDYDEGWLIGTSDFSKDAKGLCEELPNRPHGNRVI IYTPKDIVQSLQSSRIISNIPKEHLESYIDLNKVGEWYLLITSFGIFWAVTILNAGIPTN VICYHAKTGTLVEDQALLDNIASTDCSLSKLDFSKLINTKKDIKSSLDSQIEVVEVQRGE DWNDYRPARPQDFVGRTKDIKEIFDFFKKIREKEIGTRIFAITGNSGLGKSSLIITLSEK AKNLHQKKKLFLYAIDVRAAKSPDYIYSALLKTLKEAQKKGFGNSKIDLQITNVNHPLES ESIAEYLNSLNTSKQLIVLVFDQFEELFSKPDLLELFNNASNILLDAASLKANLCIGFAW KTDSTMPSEHNAYFFWHRLSDYRIVRKLNPFSDRESHAVINKFEEVIGEKIHSDLRHNLI VSSQGYPWLLKKLCIHLHEKILSGQKQEDLLDNKLDISSLFASDLEELNSNEIKALKFIA QKAPVDLVDTIDTCGEDIVTSLLHKRLIIKSGIRLNIYWDIFREYILTETVPIISLRYLP SNDFSTIWNVVKYLSKKPISIQQLQEKTDFSEGTIQNIGTDVLLFGLATRENSQYVLSED LLEEENTQENILNIIREKFKKHIITLHLKDLSSGTLLTITNFIDLMKETYPDNKYADKTW RSYTIRLIRWLELTGFLQPATEPNTWIYKDLGSPKTSVMSRRRTSNFFVPRITPQLFISI YPQIAGKNLQELINDGRTNKALEILKKFELIDNEFILDIKDFESVVYAKANSEFSIQAML EIKELYSADKLSGQALGKLLKEKYDLKWTDVTTQYSGNKLNSWAKWVKSYEVKNE >gi|333032479|gb|GL891947.1| GENE 44 49847 - 50710 654 287 aa, chain - ## HITS:1 COG:BMEI0218 KEGG:ns NR:ns ## COG: BMEI0218 COG0583 # Protein_GI_number: 17986502 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 1 281 16 303 308 153 33.0 3e-37 MNWDDTKILLAIGRTGGLSRSAKLLGISVSTVHRRAVELEKSLNAVLFSRDSDGYTLTHV GKHFFALAEKAEEHLIAMERYNDQGQQSLFRIALPELIGQQLLQSKLTALQLKHPDLQLE ISTSVVPVDFSRREADIILRLVRPESGRYIIRRLGQLEYGLYCSKDYLASFTKHAETADD LLNHRIIGWDRSLQYTFLAQWMRELTQDAAPALSFDNMHSQLLAVIEGQGITALPCFVAK ALGLVPILPMQTLKQDVWLMRHLDTKDSDYSTLISETIEKELQEYLL >gi|333032479|gb|GL891947.1| GENE 45 50935 - 51828 572 297 aa, chain + ## HITS:1 COG:CAC3446 KEGG:ns NR:ns ## COG: CAC3446 COG0384 # Protein_GI_number: 15896687 # Func_class: R General function prediction only # Function: Predicted epimerase, PhzC/PhzF homolog # Organism: Clostridium acetobutylicum # 4 288 7 294 302 247 46.0 2e-65 MTTIYVVDAFTTKPNTGNRAGVVLDADHLTTQEMQDIAAFAGYSETAFVLSPKDQSHDIH VRYFTPTHEVPICGHATIATHFLRATTGHQSDYPLIAKTGAGHLPVSIFGSSKELLVKMT QGRVEFLSPFNESQRTELASALGVSESDFADLPIQVVTTGHSKVMVPMLSRNKLDELIPN NKKLKAISAEIGCNGFFPFVLEGSRQEPITYGRMFAPAIGINEDPVTGNANGPAGAYLVH HDLIECDQKVSYWGYQGLAIKKPGRVLVTVEKIDSILHVSIAGQAILVGSVLYSGKD >gi|333032479|gb|GL891947.1| GENE 46 52143 - 53240 1487 365 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00684 NR:ns ## KEGG: ACICU_00684 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 365 610 974 974 349 100.0 1e-94 GSSTDSINISPTTTSNTVNDNDTTNNGNTSGGVIGSGDSGNGSGDGLLNGISSGNGEHNY GIGNGNGDDVDVVAPITTPLNVLGNSFSFIGGEGTGDILGPITGIIGGIGGDGDILSPIT GIIGGIDGDGDILSPITGIIGGIGGIGGDLGDNPLTGIIQSGIDVLQNLESLKTGLINTG IDTIAGTIIGVFPDAEHPVGDFADLGKLLFETSRDSVNGTLEAISDLAGADLEGASGSIT GVIDTLITNGSTASTIIQHIVGDDLVTENGGLLGSITTIIGGVDSGDGGLLGGLDGLISI NYGDSDNSNSVDVEDILGNILGSVGSNQGIAVGEPDPTGGSLIHTISLNTVNQLTDQLLH ALPTV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:37:43 2011 Seq name: gi|333032478|gb|GL891948.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld508, whole genome shotgun sequence Length of sequence - 12915 bp Number of predicted genes - 14, with homology - 12 Number of transcription units - 13, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 43 - 102 3.7 1 1 Tu 1 . + CDS 147 - 227 61 ## + Prom 295 - 354 2.7 2 2 Op 1 11/0.000 + CDS 400 - 960 256 ## COG1309 Transcriptional regulator + Prom 1042 - 1101 9.1 3 2 Op 2 . + CDS 1224 - 2528 724 ## COG0477 Permeases of the major facilitator superfamily + Term 2529 - 2584 -0.9 - Term 2519 - 2570 0.3 4 3 Tu 1 . - CDS 2623 - 3060 315 ## COG4731 Uncharacterized protein conserved in bacteria - Prom 3184 - 3243 4.8 - Term 3342 - 3378 5.0 5 4 Tu 1 . - CDS 3398 - 4426 1000 ## COG0789 Predicted transcriptional regulators - Prom 4492 - 4551 6.4 6 5 Tu 1 . - CDS 4636 - 5334 637 ## ABBFA_002282 hypothetical protein - Prom 5472 - 5531 7.4 + Prom 5431 - 5490 3.8 7 6 Tu 1 . + CDS 5586 - 6536 784 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 6546 - 6604 6.1 + Prom 6542 - 6601 6.6 8 7 Tu 1 . + CDS 6694 - 6888 94 ## ABBFA_002280 hypothetical protein + Prom 6993 - 7052 7.3 9 8 Tu 1 . + CDS 7141 - 7599 361 ## ABAYE2458 hypothetical protein + Term 7602 - 7655 -0.8 - Term 7593 - 7635 1.4 10 9 Tu 1 . - CDS 7694 - 8122 444 ## ACICU_01258 acetyltransferase (EC:2.3.1.-) - Prom 8190 - 8249 6.8 11 10 Tu 1 . - CDS 8255 - 8941 427 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 8966 - 9025 5.3 12 11 Tu 1 . - CDS 9096 - 10340 896 ## COG2367 Beta-lactamase class A - Prom 10458 - 10517 7.2 + Prom 10354 - 10413 8.4 13 12 Tu 1 . + CDS 10512 - 10619 76 ## + Prom 10781 - 10840 9.0 14 13 Tu 1 . + CDS 10963 - 12913 1762 ## COG3501 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|333032478|gb|GL891948.1| GENE 1 147 - 227 61 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRTISYLLAFAKFSLFIPPKQSLKRL >gi|333032478|gb|GL891948.1| GENE 2 400 - 960 256 186 aa, chain + ## HITS:1 COG:mlr7895 KEGG:ns NR:ns ## COG: mlr7895 COG1309 # Protein_GI_number: 13476546 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 7 94 7 92 193 61 34.0 8e-10 MPNLETSSKKLHIIRTAIRLFTTHGFHTTGVDLIVKESEIPKATLYNYFHSKERLIEMCI AFQKSLLKEEVLAIIYSSRYCTPTDKLKEIVVLHVNSNSLYHLLLKAFFEIKVAYQQAYR MAIEYRKWLTREIFELIFSLEIRALKPDANMVLNLIDGLMFGFLSTKSLDERDVVVEYFF KPTCLR >gi|333032478|gb|GL891948.1| GENE 3 1224 - 2528 724 434 aa, chain + ## HITS:1 COG:RSp0896 KEGG:ns NR:ns ## COG: RSp0896 COG0477 # Protein_GI_number: 17549117 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 3 418 9 426 458 228 31.0 1e-59 MKEIVLSDLINQQKVGPYQKFILVTCLLLMIMDGYDIQSMAYAAPLIIEEWGVQKSMLGV VFSASLFGLFVGSFLLSSLSDRFGRRPILLISTFIFSILMLLTPHVGNIEQLTVIRFVTG IFLGGIMPNVMAYSSEIVPYQSRIFTMMVISCGYTVGAMLGGGISALLVPWGGWQAIFYF GGIIPLIIFIITFFKLPESLYFLSEHSKNSSKILFWLKKFYPALTFNAEIKIINNTEVQV KKSPLELFKNQRAFFTYSIWIISILNMISLYFLANWLPTLAKESGLSLNQALLIGSTLQL GGTIGSVVMGLKIDKTGFYKVLIPVFLVAVISVALIGYSVSHIVLLFIIIFIAGFAIVGG QPAINALSASYYPVSLRTTGVGWSIGIARLGSVIGPLFGGYLSQFLVITHLFVIAAIPSL FVIIMLMIQAKYRS >gi|333032478|gb|GL891948.1| GENE 4 2623 - 3060 315 145 aa, chain - ## HITS:1 COG:RSc2798 KEGG:ns NR:ns ## COG: RSc2798 COG4731 # Protein_GI_number: 17547517 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 28 143 35 150 152 107 44.0 7e-24 MKKYLFLLLMSFYSIHSFASDKLHGSVWKTIDDATNQPRALVRFSQDKNGFLSANIEKIL VPSEASKCTMCEGTYKNKSLIGLTIVKNLKNVGQNKYDKGSILDPQSDKTYRFSVTVSPD GEKLTARGYIGISAIGRNQTWYRVK >gi|333032478|gb|GL891948.1| GENE 5 3398 - 4426 1000 342 aa, chain - ## HITS:1 COG:DR1628 KEGG:ns NR:ns ## COG: DR1628 COG0789 # Protein_GI_number: 15807649 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 5 108 15 108 185 80 47.0 3e-15 MLLKVGELAKQTGLTVRALHHYDDIGLLQPSARSDAGYRLYTPKDITRLHQIQALRGLGM SLAEIYTVLEDPNLALLPIIDRQIQAIDQRLAEQKKLRNQLGQLKSQLINGEELDLEDWL NMLELIAMYEKYFTQEELEKLTFLQSGTKTHQEWQELTQAVNTVFNAGESSSSETAQKLA HKWMKTLEQNTRTNPEWLVKLNNINSAEPEFQEKLGLMPEVVEFLLKAFSESKLSIFARY LSDNEFAFLKENYVREMKKWPQLLVDIEKLIDAEVKPNSEGAKRLAQQWLSMLQGYTGEN PSTQEKIRTAMQNEPSLADGTWLKPVTLHFLEKAVAAFKHTT >gi|333032478|gb|GL891948.1| GENE 6 4636 - 5334 637 232 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002282 NR:ns ## KEGG: ABBFA_002282 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 232 14 245 245 452 96.0 1e-126 MTNTFSDHKQVEVVSTFAELVNTHFQGNKNAICWHRNLVGDFKEIVAKLELIENITEIST EDLLTLELSEQGDLARDIILKDMQLLTDMGASPLLNLLKHYERDEELDFISTDVYSFHVD RSPIETDTFLCTYHGAASDIVPNDQVEQKVLIPEIREKLKALHDGPEAEFESFLTEYFFD LHYQPKPEAQPINLGIGHIWRLAVDHPTQKVLPCVHRAPVENDGEYRLLLIC >gi|333032478|gb|GL891948.1| GENE 7 5586 - 6536 784 316 aa, chain + ## HITS:1 COG:AF1206 KEGG:ns NR:ns ## COG: AF1206 COG1250 # Protein_GI_number: 11498805 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Archaeoglobus fulgidus # 3 309 2 310 315 212 36.0 8e-55 MEGIKTIGVVGVGVIGASWTALFLYKGFKVKVYDPYPIDEELFKKRIQANLSDLLALDQQ TDSSHHLQDIFLNLELYNNLKDAVIDADFIQENAPERLDLKQNLYQEITSYCPEKTLIAS SSSGLKVSDFQKDATHPERIFLGHPFNPPHLLPLVEIVGGKLTDPQILKTASEFYQSLGK HPIVLKKEVKGHVANRLQAALWREAFSLVKEGVCSAEDVDIAITSGPGLRWALFGPYINM ELANQKGFKEAIHHLGPPMTEWWNDMQNFQHSEETTELLEEQTKELLTHYKDVDLSQKRD KGLVDILKLRQQLELD >gi|333032478|gb|GL891948.1| GENE 8 6694 - 6888 94 64 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002280 NR:ns ## KEGG: ABBFA_002280 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 64 1 64 64 112 98.0 5e-24 MKRYWKQTESIASRWTTEQDCFLIENNSLSIDELKEHLPFSEDEIRVRRSVLGLVRRDQQ MRPY >gi|333032478|gb|GL891948.1| GENE 9 7141 - 7599 361 152 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2458 NR:ns ## KEGG: ABAYE2458 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 152 8 159 159 283 100.0 2e-75 MPKYLAVAEKVYKNIKKDDLFTNDLTQNLNCLISQIRKAIKGTEFKLKFNYIDFDEQLTK PLSECKVKVDLSVMPKFENEGEYLLWLASFIERITDGGKPKFPPISQLIPHGFKISKESF PVTVAPPKEEHADMIIKYFKSEDFMKTNKTPS >gi|333032478|gb|GL891948.1| GENE 10 7694 - 8122 444 142 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01258 NR:ns ## KEGG: ACICU_01258 # Name: not_defined # Def: acetyltransferase (EC:2.3.1.-) # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 142 1 142 142 284 100.0 7e-76 MEISLRFATPADLKVINERYAEIDFVPSHAGELIVLASIDEKIIGQGRVVGIDANSGELG GIYVFPGNEGLGIARKVVDFLIKNSDFSMLYYLPFAELEGFYGSMGFAAVKDMAQVPEAV LKKHEWCNSNYDKPVLLLERSK >gi|333032478|gb|GL891948.1| GENE 11 8255 - 8941 427 228 aa, chain - ## HITS:1 COG:SA0568 KEGG:ns NR:ns ## COG: SA0568 COG1011 # Protein_GI_number: 15926289 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Staphylococcus aureus N315 # 2 194 3 196 239 90 26.0 3e-18 MLKMKKVLLFDLDQTILNRNESLLKFLNWQVSYLNLVPHELKKSFINRFIELDNNGSVWK DIVYSQLIKDFNIKKYDTSELLQSYINDFNKFSTAFENAPKTIQNLHAQGYTLGLVSNGK TPFQEKNFYALELTDYFSIIVISEAIGLRKPDPEIYLYTCNQLDCKPSDCIFIGDNPKAD IEGAKKIGMKTIYFHPTLTLHPSLSDASIHHYDELEETVRRLINPPHF >gi|333032478|gb|GL891948.1| GENE 12 9096 - 10340 896 414 aa, chain - ## HITS:1 COG:DRA0241 KEGG:ns NR:ns ## COG: DRA0241 COG2367 # Protein_GI_number: 15807905 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Deinococcus radiodurans # 16 406 106 495 499 169 31.0 9e-42 MKDFLTKKMYATRALFFAVGVMALNVSPIAISTTHAATEQKMDISTTLSLIFADKPIEAS LFSPQFLEQVPITQIQKIVDDLKVSLGALKNLNVSNGSGTIDFEKGELPVSISLNEQGQI STLWFSAPHFKTISLDEMVKGLHENAIGKTSLLVIVDNKPVVVENDKTPMAVGSTFKLLV LKAYEDAIKKGELKRETIVSLKEKNRSLPTGVLQNLPAGTPVNLELLAQLMIQISDNTAT DSLIEVLKKPRIETLSPRNSPLLTTRELFQLIDPSNEKLRNKFKTGTKSARLEALAELDK LPLPSVSSIGKLATWQDAEWYMSAHEICPLLESVQDAPALNSSLNPLFKNLNWQKIGFKG GSEYGVINFSVIGKTQKGHKVCAVFTANGNEPQPESKLAILFTGILQAVDFMNH >gi|333032478|gb|GL891948.1| GENE 13 10512 - 10619 76 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAVNKVYRQLRTLNIDVSFPKIKLISLLKYINILN >gi|333032478|gb|GL891948.1| GENE 14 10963 - 12913 1762 650 aa, chain + ## HITS:1 COG:RSp0518_1 KEGG:ns NR:ns ## COG: RSp0518_1 COG3501 # Protein_GI_number: 17548739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 13 596 13 586 586 300 33.0 7e-81 MLNSIHQVLDSLGISPQKRAIHVQFTSPILNDQVFLQRIDGVHALNDGLKAELLCLSTNA TIQLKSFIGVQAAVDIVTERGELTRVTGIITHAQQGQSDGSLTLYKLTLEDPTALWKYRR NSRVFMNKSVVEIWEILFKEWQTKNPLFAASLSLDLSGLTQTYDVRPFVMQHNESDWNFL TRLLRSENISWLIDEAQHIVPSTDTSIQAQKLRLIDANSQYQPLDRKTIRYHRSSAVEQY DSMTRLTAERSLQPNVMHIQRWQAEILDQEEGIGSVQSKHQHSEHYDNATLGLEQAWNYS PAWIGDLKGEDGVTKSGNQQVERLNQNLHNYYEAQAKRFIAQTTVRDAYVGYYFELNEHP EIDQHESSDKSFLIVSKNFFNQNNLPKDLNDQINGLLAQSNWAIQNPENSDERQANQLIL QRRHIPTTPAYNPQIHSPVTHPQRAKVVGPEGEEIYVDEWGRIKVRFLFTRSDDHSHDGG AGTNNNDTDSAWIDVLTPWAGEGYGARFLPRIGEIVVIDFFNGDIDRPFVMGRIHEAQRQ PTKFDNKGKLPDTKKLSGIRSKEVSGGGFGQLRFDDTPGQISTQLQSSHGASQLNLGKLS HPKDKAESEDRGEGFELRTDQWGALRAGQGLLVSTHKQDNAKGDHLDAEV Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:38:06 2011 Seq name: gi|333032477|gb|GL891949.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld510, whole genome shotgun sequence Length of sequence - 5304 bp Number of predicted genes - 7, with homology - 7 Number of transcription units - 1, operones - 1 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 79 - 106 -0.1 1 1 Op 1 . - CDS 125 - 439 378 ## ACICU_02738 hypothetical protein 2 1 Op 2 . - CDS 508 - 1020 315 ## ACICU_02739 hypothetical protein - Term 1028 - 1054 -1.0 3 1 Op 3 . - CDS 1072 - 1215 71 ## ACICU_02740 hypothetical protein 4 1 Op 4 . - CDS 1313 - 2416 698 ## ACICU_02741 phage putative head morphogenesis protein, SPP1 gp7 5 1 Op 5 . - CDS 2418 - 3011 606 ## ACICU_02742 hypothetical protein 6 1 Op 6 . - CDS 2861 - 3898 509 ## ACICU_02742 hypothetical protein 7 1 Op 7 . - CDS 3895 - 5031 1029 ## COG5362 Phage-related terminase - Prom 5057 - 5116 9.6 Predicted protein(s) >gi|333032477|gb|GL891949.1| GENE 1 125 - 439 378 104 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02738 NR:ns ## KEGG: ACICU_02738 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 104 1 104 104 187 100.0 9e-47 MTKEVTEQELAEKSVAPRVTKAQIDAMMDRVTYTVEQRPGGTTSTFVHAFLDGKFFLATG FSACVNAENFDAEMGERIARSNAEKSAENKLWELEGYRLFATNF >gi|333032477|gb|GL891949.1| GENE 2 508 - 1020 315 170 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02739 NR:ns ## KEGG: ACICU_02739 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 170 1 170 170 310 100.0 2e-83 MTKQPQTLQELVQNVEYFNVDQASPDALPKRIICILKLHSGVQVNGEYLIPEGSPVGDYN PFALTSAIENLKKLGFEIIEPPSEPQVIEGEAVEVGQNLDDPSLKAVEAPKIKSLESHVT VTGAGVNTYDVRHANLHSIEALTSLLKVTKLNTDVSNAANSKLVELINGL >gi|333032477|gb|GL891949.1| GENE 3 1072 - 1215 71 47 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02740 NR:ns ## KEGG: ACICU_02740 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 47 1 47 47 73 100.0 3e-12 MKQITMTQAQYILSTNLIVVPFVRKLIPRYMAILGYNFKQPTAQIPH >gi|333032477|gb|GL891949.1| GENE 4 1313 - 2416 698 367 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02741 NR:ns ## KEGG: ACICU_02741 # Name: not_defined # Def: phage putative head morphogenesis protein, SPP1 gp7 # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 367 1 367 367 713 100.0 0 MAATIKELLEALTQHQAYLFRASSKTVNELLGLFNDDTKAMLSKLRDLLEELNDSEKIAL AGGKYTTSNLREIKDLIDQWFASVNTSLPEAFTVSATALAVYEANYIAKLYGAKNKTLSG DKFYSAAKKVPLAGGALVDDLLSRITEAARQKVEYAIRDGINTGKTNSEIIQRIRGTKKL NYEDGLLNSTKSDIERTVRTVRSHVANQAYLKSFDQIGFKYVRFVSVLDGRTSKLCASLD GSFWEINDPAKRVPPLHPNCRSILVPVEKDGSLAGQRPFVMDERRVKDIPKEERDQLIGQ MDANITFKEFFKKTDDFFQKEWLGPKRYKLFKEGKFDFEKFFDPDGRLYTLDQLRMLDEQ LFKRLGI >gi|333032477|gb|GL891949.1| GENE 5 2418 - 3011 606 197 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02742 NR:ns ## KEGG: ACICU_02742 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 197 287 483 483 390 100.0 1e-107 MGQPQFYAKGVNWAWYDEAKKRGIYIGAKVLLPLPENGDLGIVQADPNTLAREAMKDKWE QMKELGARLIEKGSAAKKTATESNSDDAVQHSVLSLCVVNMNEALSMALRWAAKFVVPNV DVLTKDELMFEISQEFNKQGYLAELARQLFEAALQGRSSFKSWWEYNQTGMFPKQKYEEE ILNVEAEQDGTLNQGVN >gi|333032477|gb|GL891949.1| GENE 6 2861 - 3898 509 345 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02742 NR:ns ## KEGG: ACICU_02742 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 284 1 284 483 561 99.0 1e-158 MSDVTFKHPEYVKNLPYWQKLDDVCEGEDAVKAKGEKYLPKPNAHDQSPANKSAYEAYRT RAVFYEVTGTTLNSLVGAAFATDPSFKFPPELAHLERNANGAGLSAYQLAQNGIRHLLKH YRCALYVDYPAVTPARNLAEFKQQKAYPMIHLLNAIDVINWDSMMIDNQKKLCLVVIREF TSERGADGFSKSEVEQYRVLRLEPDNEGNFIYTVQVYTKGDKGTWKGEDKKYPTDNNGDF WSYIPFTFVGAIDNSEEIKKPPLLPLANLNLAHYRDSADFQESVGGGGTFKSPFFIWANH SFMLRELIGLGMTRLKSVAFISVRKFYYLYLKTVIWGLYKQIQTH >gi|333032477|gb|GL891949.1| GENE 7 3895 - 5031 1029 378 aa, chain - ## HITS:1 COG:mlr8003_2 KEGG:ns NR:ns ## COG: mlr8003_2 COG5362 # Protein_GI_number: 13476623 # Func_class: R General function prediction only # Function: Phage-related terminase # Organism: Mesorhizobium loti # 190 363 3 179 190 136 43.0 8e-32 MLAANNAFQTRNMVQEKAYKKVFPDLKLREDSKAKDFWRTDAGGVCYATGTGGTITGFGA GKMREGFGGCIIIDDPHKADEAKSKTIREGVIDWFQNTLESRTNSPETPIIVIMQRLHED DLAGWLLGDRKDGVPVAGGNGEVWEHLCLSAIQEDGSALWPAKHNIQKLKQMEQAAPYVF AGQYRQMPSPPAGGFFKPDNIEIVDALPADVVKQVRAWDFGATENEGDFTAGVREALGAD GFTYIVDVTRGQLGPDNVNKRLKQVTELDGMGVTVRIPQDPGQAGKSQASAFVKLLAGYD VKAKPVSGDKLTRAQPFAAQVNVGNVRMLRGDWNKDFIEELRNFPNGTHDDQVDAGSDAF NELNGGFEAFFADMGFAR Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:38:30 2011 Seq name: gi|333032476|gb|GL891950.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld523, whole genome shotgun sequence Length of sequence - 7309 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 8, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 378 - 1217 214 ## COG0294 Dihydropteroate synthase and related enzymes 2 1 Op 2 . - CDS 1211 - 1558 128 ## COG2076 Membrane transporters of cations and cationic drugs - Prom 1597 - 1656 3.3 3 2 Tu 1 . - CDS 1722 - 2513 437 ## COG1708 Predicted nucleotidyltransferases - Prom 2614 - 2673 1.6 - Term 2805 - 2847 -0.1 4 3 Tu 1 . - CDS 2926 - 3438 106 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Term 3507 - 3534 -0.8 5 4 Tu 1 . - CDS 3557 - 3973 145 ## ABAYE3573 gentamicin 3'-acetyltransferase (gentamicin acetyltransferase I) (aminoglycoside N(3')-acetyltransferase I) (AAC(3)-I) (EC:2.3.1.60) 6 5 Tu 1 . + CDS 4726 - 5205 63 ## COG0582 Integrase + Term 5367 - 5403 0.4 + Prom 5308 - 5367 2.8 7 6 Tu 1 . + CDS 5558 - 5758 97 ## ASA_P4G104 transposition modulator TnpM 8 7 Tu 1 . + CDS 6190 - 6444 224 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 9 8 Tu 1 . - CDS 6770 - 7129 194 ## gi|332875888|ref|ZP_08443676.1| hypothetical protein HMPREF0022_03318 Predicted protein(s) >gi|333032476|gb|GL891950.1| GENE 1 378 - 1217 214 279 aa, chain - ## HITS:1 COG:RSc1527 KEGG:ns NR:ns ## COG: RSc1527 COG0294 # Protein_GI_number: 17546246 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Ralstonia solanacearum # 4 248 26 266 291 129 37.0 9e-30 MVTVFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPAD EIRRIAPLLDALSDQMHRVSIDSFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADC RLVVMHSAQRDGIATRTGHLRPEDALDEIVRFFEARVSALRRSGVAADRLILDPGMGFFL SPAPETSLHVLSNLQKLKSALGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGN GADYVRTHAPGDLRSAITFSETLAKFRSRDARDRGLDHA >gi|333032476|gb|GL891950.1| GENE 2 1211 - 1558 128 115 aa, chain - ## HITS:1 COG:BMEI1045 KEGG:ns NR:ns ## COG: BMEI1045 COG2076 # Protein_GI_number: 17987328 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane transporters of cations and cationic drugs # Organism: Brucella melitensis # 1 100 1 100 110 101 61.0 4e-22 MKGWLFLVIAIVGEVIATSALKSSEGFTKLAPSAVVIIGYGIAFYFLSLVLKSIPVGVAY AVWSGLGVVIITAIAWLLHGQKLDAWGFVGMGLIIAAFLLARSPSWKSLRRPTPW >gi|333032476|gb|GL891950.1| GENE 3 1722 - 2513 437 263 aa, chain - ## HITS:1 COG:STM1264 KEGG:ns NR:ns ## COG: STM1264 COG1708 # Protein_GI_number: 16764615 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferases # Organism: Salmonella typhimurium LT2 # 1 257 1 257 262 210 44.0 3e-54 MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKPHSDIDLLVTVTVRLDE TTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYPAKRELQFGEWQRNDILAG IFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQDLFEALNETLTLWNSPPDWA GDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPAQYQPVILEARQAYLGQEEDRLA SRADQLEEFVHYVKGEITKVVGK >gi|333032476|gb|GL891950.1| GENE 4 2926 - 3438 106 170 aa, chain - ## HITS:1 COG:sll1671 KEGG:ns NR:ns ## COG: sll1671 COG0454 # Protein_GI_number: 16329399 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Synechocystis # 1 154 4 160 160 116 38.0 2e-26 MNVRTCTESDVASIAVVFTESIHVLGASHYDASQRNAWAPRPADIEAWSARLSGLQTLLA IEGDAVIGFISYELSGHIEFLYTAPGSERRGVASVLYREVEKALPGVSLFTEASLVAKPF FLRHGFSVVEEQNVSRGGVMFRRYAMRKAVVAQHGAQADRPALRAVRRLS >gi|333032476|gb|GL891950.1| GENE 5 3557 - 3973 145 138 aa, chain - ## HITS:1 COG:no KEGG:ABAYE3573 NR:ns ## KEGG: ABAYE3573 # Name: aacC1 # Def: gentamicin 3'-acetyltransferase (gentamicin acetyltransferase I) (aminoglycoside N(3')-acetyltransferase I) (AAC(3)-I) (EC:2.3.1.60) # Organism: A.baumannii_AYE # Pathway: not_defined # 1 138 40 177 177 267 100.0 1e-70 MRAALDLFGREFGDVATYSQHQPDSDYLGNLLRSKTFIALAAFDQEAVVGALAAYVLPKF EQARSEIYIYDLAVSGEHRRQGIATALINLLKHEANALGAYVIYVQADYGDDPAVALYTK LGIREEVMHFDIDPSTAT >gi|333032476|gb|GL891950.1| GENE 6 4726 - 5205 63 159 aa, chain + ## HITS:1 COG:VCA0291 KEGG:ns NR:ns ## COG: VCA0291 COG0582 # Protein_GI_number: 15601056 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Vibrio cholerae # 2 152 169 320 320 144 50.0 6e-35 MLPESLAPSLREQLSRARAWWLKDQAEGRSGVALPDALERKYPRAGHSWPWFWVFAQHTH STDPRSGVVRRHHMYDQTFQRAFKRAVEQAGITKPATPHTLRHSFATALLRSGYDIRTVQ DLLGHSDVSTTMIYTHVLKVGGAGVRSPLDALPPLTSER >gi|333032476|gb|GL891950.1| GENE 7 5558 - 5758 97 66 aa, chain + ## HITS:1 COG:no KEGG:ASA_P4G104 NR:ns ## KEGG: ASA_P4G104 # Name: tnpM # Def: transposition modulator TnpM # Organism: A.salmonicida # Pathway: not_defined # 1 66 129 194 194 120 100.0 2e-26 MNANEPSTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFQARASTATETSVKPDAC DSPPSG >gi|333032476|gb|GL891950.1| GENE 8 6190 - 6444 224 84 aa, chain + ## HITS:1 COG:Cgl1671 KEGG:ns NR:ns ## COG: Cgl1671 COG1961 # Protein_GI_number: 19552921 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Corynebacterium glutamicum # 2 81 102 181 184 88 57.0 2e-18 MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKSLSSERIAELRQRVEAGE QKTKLAREFGISRETLYQYLRTDQ >gi|333032476|gb|GL891950.1| GENE 9 6770 - 7129 194 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332875888|ref|ZP_08443676.1| ## NR: gi|332875888|ref|ZP_08443676.1| hypothetical protein HMPREF0022_03318 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_03318 [Acinetobacter baumannii 6014059] # 1 119 61 179 179 208 100.0 1e-52 MRVRQWFGQGVVDAPVSTGDRLGTRPLDGVEGGQNDRLPPQVPDQGAGQHDAFVGLHRQL GQHLDGLPVMAHGEGPETEHGLQLAQVLAPGLLPLAVLVPAFDADLELVGDQLQQGRER Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:39:23 2011 Seq name: gi|333032475|gb|GL891951.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld530, whole genome shotgun sequence Length of sequence - 137405 bp Number of predicted genes - 149, with homology - 148 Number of transcription units - 76, operones - 35 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 306 166 ## COG5556 Uncharacterized conserved protein 2 1 Op 2 . - CDS 365 - 772 275 ## ACICU_02745 hypothetical protein - Prom 888 - 947 80.4 3 2 Tu 1 . - CDS 1001 - 1468 295 ## ACICU_02746 hypothetical protein - Prom 1509 - 1568 5.0 4 3 Tu 1 . - CDS 1641 - 1844 167 ## ACICU_02747 hypothetical protein - Prom 1874 - 1933 2.1 - Term 1856 - 1897 5.4 5 4 Tu 1 . - CDS 1946 - 2716 343 ## COG0338 Site-specific DNA methylase - Prom 2841 - 2900 3.2 - Term 2857 - 2893 5.2 6 5 Tu 1 . - CDS 2902 - 3132 313 ## ACICU_02749 hypothetical protein - Prom 3152 - 3211 6.5 - Term 3203 - 3235 1.1 7 6 Op 1 . - CDS 3313 - 3876 455 ## ACICU_02750 hypothetical protein 8 6 Op 2 . - CDS 3898 - 4182 232 ## ACICU_02751 hypothetical protein 9 6 Op 3 . - CDS 4192 - 4599 286 ## ACICU_02752 hypothetical protein 10 6 Op 4 . - CDS 4596 - 4997 273 ## ACICU_02753 hypothetical protein 11 6 Op 5 . - CDS 4984 - 5166 197 ## ACICU_02754 hypothetical protein 12 6 Op 6 . - CDS 5163 - 5561 293 ## ACICU_02755 hypothetical protein 13 6 Op 7 . - CDS 5573 - 6439 469 ## COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 14 6 Op 8 . - CDS 6436 - 6894 360 ## ACICU_02757 hypothetical protein 15 6 Op 9 . - CDS 6891 - 7994 622 ## ACICU_02758 hypothetical protein 16 6 Op 10 . - CDS 7991 - 8845 279 ## ACICU_02759 phosphoadenosine phosphosulfate reductase 17 6 Op 11 . - CDS 8842 - 9168 309 ## ACICU_02760 hypothetical protein 18 6 Op 12 . - CDS 9187 - 9501 77 ## ACICU_02761 hypothetical protein - Prom 9524 - 9583 1.8 19 7 Tu 1 . - CDS 9620 - 9868 184 ## ACICU_02762 hypothetical protein - Prom 9893 - 9952 5.7 + Prom 9890 - 9949 7.2 20 8 Tu 1 . + CDS 9986 - 10762 506 ## ACICU_02763 hypothetical protein + Term 10787 - 10819 1.6 + Prom 10786 - 10845 6.8 21 9 Op 1 . + CDS 10980 - 11168 198 ## ACICU_02764 hypothetical protein 22 9 Op 2 . + CDS 11171 - 11491 311 ## ACICU_02765 hypothetical protein 23 9 Op 3 . + CDS 11506 - 12540 871 ## ACICU_02766 hypothetical protein 24 9 Op 4 . + CDS 12537 - 13166 254 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 25 9 Op 5 . + CDS 13221 - 14573 1072 ## ACICU_02768 hypothetical protein + Prom 14594 - 14653 1.5 26 10 Op 1 . + CDS 14713 - 14916 90 ## ACICU_02769 hypothetical protein 27 10 Op 2 . + CDS 14948 - 15820 702 ## ACICU_02770 hypothetical protein 28 10 Op 3 . + CDS 15822 - 16034 119 ## ACICU_02771 hypothetical protein 29 10 Op 4 . + CDS 16035 - 16319 274 ## ACICU_02772 hypothetical protein + Term 16345 - 16394 -1.0 - Term 16175 - 16225 1.1 30 11 Tu 1 . - CDS 16387 - 16488 110 ## - Prom 16510 - 16569 4.0 + Prom 16443 - 16502 7.5 31 12 Op 1 . + CDS 16572 - 17780 1124 ## ABBFA_000951 hypothetical protein 32 12 Op 2 . + CDS 17747 - 18403 513 ## COG0560 Phosphoserine phosphatase - Term 18382 - 18410 2.3 33 13 Op 1 7/0.000 - CDS 18430 - 19563 1160 ## COG0263 Glutamate 5-kinase 34 13 Op 2 . - CDS 19579 - 20799 796 ## PROTEIN SUPPORTED gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 - Prom 20900 - 20959 8.1 35 14 Op 1 . - CDS 20964 - 21638 432 ## ABBFA_000947 hypothetical protein 36 14 Op 2 . - CDS 21650 - 22273 550 ## ABBFA_000946 hypothetical protein - Prom 22334 - 22393 6.0 - Term 22468 - 22495 0.1 37 15 Tu 1 . - CDS 22534 - 23991 1804 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 24104 - 24163 8.4 38 16 Tu 1 . - CDS 24208 - 25152 793 ## COG2962 Predicted permeases - Prom 25203 - 25262 8.6 - Term 25207 - 25248 8.3 39 17 Op 1 . - CDS 25264 - 25851 594 ## COG3040 Bacterial lipocalin - Prom 25879 - 25938 3.8 40 17 Op 2 . - CDS 25945 - 27966 2523 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 28130 - 28189 4.6 + Prom 27988 - 28047 4.5 41 18 Tu 1 . + CDS 28146 - 28937 759 ## ACICU_02783 hypothetical protein + Term 28955 - 28998 5.1 + Prom 28954 - 29013 7.8 42 19 Tu 1 . + CDS 29106 - 30542 1189 ## COG2202 FOG: PAS/PAC domain + Term 30548 - 30574 0.3 - Term 30536 - 30562 0.3 43 20 Tu 1 . - CDS 30577 - 30756 218 ## ABSDF0967 hypothetical protein - Prom 30780 - 30839 4.5 + Prom 30884 - 30943 7.1 44 21 Tu 1 . + CDS 30964 - 32199 1593 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 32208 - 32262 8.6 - Term 32198 - 32244 11.2 45 22 Tu 1 . - CDS 32252 - 32662 295 ## COG3791 Uncharacterized conserved protein - Prom 32713 - 32772 5.6 + Prom 32753 - 32812 7.8 46 23 Tu 1 . + CDS 32848 - 33285 602 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism + Term 33293 - 33325 1.0 47 24 Tu 1 . - CDS 33300 - 33728 420 ## ABAYE0948 hypothetical protein + TRNA 33963 - 34038 83.0 # Asn GTT 0 0 - Term 34095 - 34136 -1.0 48 25 Tu 1 . - CDS 34222 - 34980 894 ## COG4221 Short-chain alcohol dehydrogenase of unknown specificity - Prom 35088 - 35147 11.8 49 26 Op 1 . - CDS 35274 - 35918 767 ## COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 50 26 Op 2 9/0.000 - CDS 35925 - 36650 1068 ## COG0854 Pyridoxal phosphate biosynthesis protein 51 26 Op 3 . - CDS 36664 - 37377 594 ## COG1381 Recombinational DNA repair protein (RecF pathway) 52 26 Op 4 . - CDS 37387 - 37587 278 ## ACICU_02794 hypothetical protein 53 26 Op 5 18/0.000 - CDS 37606 - 38634 1165 ## COG1159 GTPase 54 26 Op 6 . - CDS 38640 - 39344 512 ## COG0571 dsRNA-specific ribonuclease 55 26 Op 7 . - CDS 39304 - 39678 329 ## ABBFA_000925 hypothetical protein 56 26 Op 8 14/0.000 - CDS 39702 - 40529 839 ## COG0681 Signal peptidase I 57 26 Op 9 . - CDS 40600 - 42417 2145 ## COG0481 Membrane GTPase LepA - Prom 42489 - 42548 7.5 - Term 42431 - 42469 0.5 58 27 Tu 1 . - CDS 42592 - 43044 403 ## COG0824 Predicted thioesterase - Prom 43091 - 43150 6.0 - Term 43114 - 43150 3.2 59 28 Tu 1 . - CDS 43165 - 44541 1579 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 44648 - 44707 3.6 + Prom 44664 - 44723 3.3 60 29 Tu 1 . + CDS 44766 - 46415 1820 ## COG0029 Aspartate oxidase + Term 46427 - 46470 10.3 - Term 46408 - 46468 2.4 61 30 Tu 1 . - CDS 46470 - 46886 338 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 46916 - 46975 3.6 62 31 Op 1 10/0.000 - CDS 47024 - 47623 804 ## COG0125 Thymidylate kinase 63 31 Op 2 6/0.000 - CDS 47633 - 48703 913 ## COG1559 Predicted periplasmic solute-binding protein 64 31 Op 3 . - CDS 48705 - 49517 733 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Prom 49589 - 49648 8.3 + Prom 49655 - 49714 13.7 65 32 Op 1 . + CDS 49781 - 50788 1236 ## COG1613 ABC-type sulfate transport system, periplasmic component 66 32 Op 2 1/0.087 + CDS 50819 - 51427 790 ## COG3545 Predicted esterase of the alpha/beta hydrolase fold 67 32 Op 3 17/0.000 + CDS 51508 - 52341 815 ## COG0555 ABC-type sulfate transport system, permease component 68 32 Op 4 17/0.000 + CDS 52338 - 53222 919 ## COG4208 ABC-type sulfate transport system, permease component 69 32 Op 5 1/0.087 + CDS 53234 - 54295 1517 ## COG1118 ABC-type sulfate/molybdate transport systems, ATPase component 70 32 Op 6 . + CDS 54367 - 55290 1206 ## COG0583 Transcriptional regulator + Term 55306 - 55346 8.1 - Term 55334 - 55372 3.5 71 33 Tu 1 . - CDS 55379 - 56119 1042 ## AOLE_04480 putative porin protein associated with imipenem resistance - Prom 56226 - 56285 6.5 + Prom 56333 - 56392 10.4 72 34 Op 1 . + CDS 56414 - 57235 979 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase + Term 57245 - 57300 11.2 73 34 Op 2 5/0.000 + CDS 57314 - 58024 707 ## COG0602 Organic radical activating enzymes 74 34 Op 3 . + CDS 58065 - 58736 758 ## COG0603 Predicted PP-loop superfamily ATPase 75 34 Op 4 . + CDS 58750 - 59166 510 ## ABBFA_000904 hypothetical protein + Term 59188 - 59217 2.1 + Prom 59176 - 59235 7.9 76 35 Op 1 . + CDS 59258 - 59944 824 ## COG2102 Predicted ATPases of PP-loop superfamily 77 35 Op 2 . + CDS 59962 - 60423 500 ## COG1225 Peroxiredoxin + Term 60444 - 60472 -0.1 + Prom 60429 - 60488 5.0 78 36 Tu 1 . + CDS 60545 - 61114 347 ## COG2340 Uncharacterized protein with SCP/PR1 domains - Term 61120 - 61173 -0.8 79 37 Tu 1 . - CDS 61185 - 61775 542 ## COG1056 Nicotinamide mononucleotide adenylyltransferase - Prom 61808 - 61867 6.3 + Prom 61588 - 61647 6.7 80 38 Tu 1 . + CDS 61885 - 62685 951 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Term 62713 - 62764 4.1 - Term 62646 - 62680 -0.4 81 39 Tu 1 . - CDS 62682 - 62999 389 ## COG3323 Uncharacterized protein conserved in bacteria 82 40 Op 1 . - CDS 63068 - 63190 73 ## ACICU_02824 hypothetical protein 83 40 Op 2 . - CDS 63147 - 63275 92 ## ACICU_02825 hypothetical protein - Prom 63327 - 63386 3.2 84 41 Op 1 . - CDS 63394 - 64599 1257 ## COG0477 Permeases of the major facilitator superfamily - Prom 64621 - 64680 3.1 - Term 64632 - 64667 5.1 85 41 Op 2 . - CDS 64682 - 68515 4859 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 68689 - 68748 4.2 + Prom 68632 - 68691 6.2 86 42 Op 1 . + CDS 68825 - 70165 1346 ## COG0232 dGTP triphosphohydrolase + Term 70193 - 70237 4.1 87 42 Op 2 29/0.000 + CDS 70257 - 70856 707 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 88 42 Op 3 . + CDS 70865 - 71869 1435 ## COG2255 Holliday junction resolvasome, helicase subunit + Term 71875 - 71908 3.1 + Prom 71881 - 71940 10.6 89 43 Tu 1 . + CDS 72074 - 73408 1254 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Term 73533 - 73587 8.2 + Prom 73508 - 73567 4.5 90 44 Op 1 13/0.000 + CDS 73619 - 74026 471 ## COG0824 Predicted thioesterase 91 44 Op 2 30/0.000 + CDS 74050 - 74748 804 ## COG0811 Biopolymer transport proteins 92 44 Op 3 . + CDS 74748 - 75200 457 ## COG0848 Biopolymer transport protein 93 44 Op 4 . + CDS 75204 - 76550 1527 ## COG3468 Type V secretory pathway, adhesin AidA + Prom 76554 - 76613 2.3 94 45 Op 1 20/0.000 + CDS 76644 - 77924 1281 ## COG0823 Periplasmic component of the Tol biopolymer transport system 95 45 Op 2 . + CDS 77952 - 78515 566 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins + Term 78530 - 78565 6.0 - Term 78509 - 78561 12.8 96 46 Tu 1 . - CDS 78570 - 78758 267 ## ABBFA_000884 hypothetical protein - Prom 78818 - 78877 6.0 + Prom 78834 - 78893 6.8 97 47 Op 1 . + CDS 78941 - 79912 1314 ## COG0158 Fructose-1,6-bisphosphatase + Term 79929 - 79964 5.0 98 47 Op 2 1/0.087 + CDS 79969 - 80745 665 ## COG0566 rRNA methylases + Prom 80749 - 80808 3.5 99 48 Op 1 . + CDS 80905 - 81519 579 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 100 48 Op 2 . + CDS 81509 - 81829 341 ## ACICU_02842 hypothetical protein 101 48 Op 3 . + CDS 81819 - 82208 443 ## ACICU_02843 hypothetical protein + Term 82260 - 82302 10.1 - Term 82238 - 82295 11.6 102 49 Op 1 . - CDS 82299 - 84734 2042 ## ACICU_02845 putative outer membrane protein A 103 49 Op 2 . - CDS 84750 - 86600 1575 ## ACICU_02846 hypothetical protein - Prom 86789 - 86848 9.7 104 50 Op 1 8/0.000 - CDS 86917 - 87615 709 ## COG0593 ATPase involved in DNA replication initiation 105 50 Op 2 . - CDS 87636 - 88829 1215 ## COG0628 Predicted permease - Prom 88849 - 88908 5.2 + Prom 88820 - 88879 7.3 106 51 Op 1 21/0.000 + CDS 88965 - 90035 1839 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 107 51 Op 2 . + CDS 90032 - 90661 675 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN + Term 90680 - 90730 3.5 - Term 90676 - 90705 1.4 108 52 Op 1 . - CDS 90725 - 91534 807 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 109 52 Op 2 . - CDS 91553 - 92650 1146 ## COG0616 Periplasmic serine proteases (ClpP class) + Prom 92605 - 92664 7.0 110 53 Tu 1 . + CDS 92730 - 93689 838 ## COG1560 Lauroyl/myristoyl acyltransferase 111 54 Tu 1 1/0.087 - CDS 93642 - 96074 1380 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 96098 - 96157 4.9 - Term 96097 - 96135 6.2 112 55 Op 1 23/0.000 - CDS 96160 - 96846 194 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 113 55 Op 2 . - CDS 96839 - 98095 1250 ## COG4591 ABC-type transport system, involved in lipoprotein release, permease component - Prom 98124 - 98183 3.5 - Term 98263 - 98314 0.4 114 56 Op 1 . - CDS 98322 - 99230 558 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 115 56 Op 2 . - CDS 99241 - 99708 570 ## COG1671 Uncharacterized protein conserved in bacteria - Prom 99769 - 99828 7.1 + Prom 99896 - 99955 5.8 116 57 Op 1 . + CDS 99983 - 100924 911 ## ACICU_02859 hypothetical protein 117 57 Op 2 . + CDS 100958 - 101104 73 ## ABBFA_000865 hypothetical protein + Term 101124 - 101162 6.2 - Term 101109 - 101151 8.8 118 58 Tu 1 . - CDS 101162 - 102241 1236 ## COG1932 Phosphoserine aminotransferase - Prom 102364 - 102423 8.4 + Prom 102350 - 102409 11.3 119 59 Op 1 13/0.000 + CDS 102621 - 104108 1342 ## COG1538 Outer membrane protein 120 59 Op 2 9/0.000 + CDS 104121 - 105242 1302 ## COG0845 Membrane-fusion protein + Prom 105259 - 105318 3.2 121 59 Op 3 22/0.000 + CDS 105351 - 106376 692 ## COG0842 ABC-type multidrug transport system, permease component 122 59 Op 4 . + CDS 106373 - 107464 924 ## COG0842 ABC-type multidrug transport system, permease component + Prom 107516 - 107575 8.1 123 60 Op 1 2/0.043 + CDS 107729 - 108523 562 ## COG3394 Uncharacterized protein conserved in bacteria 124 60 Op 2 . + CDS 108520 - 109500 859 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 125 60 Op 3 . + CDS 109500 - 109880 183 ## ABBFA_000856 GtrA-like family protein 126 60 Op 4 . + CDS 109890 - 111536 876 ## COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family + Term 111545 - 111587 4.8 - Term 111532 - 111575 7.2 127 61 Tu 1 . - CDS 111588 - 114302 3402 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit - Prom 114390 - 114449 6.5 - Term 114605 - 114650 9.4 128 62 Op 1 29/0.000 - CDS 114668 - 115600 1364 ## COG2025 Electron transfer flavoprotein, alpha subunit 129 62 Op 2 . - CDS 115618 - 116367 970 ## COG2086 Electron transfer flavoprotein, beta subunit - Prom 116525 - 116584 8.4 - Term 116638 - 116686 -0.3 130 63 Tu 1 . - CDS 116803 - 117729 920 ## COG4973 Site-specific recombinase XerC - Prom 117785 - 117844 7.6 + Prom 117574 - 117633 5.5 131 64 Tu 1 . + CDS 117853 - 118476 508 ## COG1280 Putative threonine efflux protein + Term 118510 - 118555 6.5 - Term 118495 - 118546 9.5 132 65 Op 1 2/0.043 - CDS 118563 - 119408 966 ## COG0253 Diaminopimelate epimerase 133 65 Op 2 . - CDS 119414 - 120664 1451 ## COG0019 Diaminopimelate decarboxylase 134 65 Op 3 . - CDS 120687 - 120911 120 ## ABAYE0859 lipoprotein (LppL) - Prom 120934 - 120993 5.9 - Term 120993 - 121026 2.0 135 66 Tu 1 . - CDS 121052 - 122530 1307 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 122687 - 122746 5.5 + Prom 122785 - 122844 4.6 136 67 Op 1 . + CDS 122948 - 124336 1708 ## COG1066 Predicted ATP-dependent serine protease + Prom 124338 - 124397 2.3 137 67 Op 2 . + CDS 124419 - 125396 1201 ## COG4395 Uncharacterized protein conserved in bacteria + Term 125409 - 125462 12.1 - Term 125395 - 125448 12.1 138 68 Op 1 . - CDS 125455 - 126429 1027 ## COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) 139 68 Op 2 . - CDS 126426 - 127493 1161 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 127517 - 127576 4.5 140 69 Tu 1 . - CDS 127598 - 127990 386 ## COG3339 Uncharacterized conserved protein - Prom 128013 - 128072 7.9 - Term 128050 - 128095 2.1 141 70 Op 1 5/0.000 - CDS 128110 - 128901 735 ## COG1526 Uncharacterized protein required for formate dehydrogenase activity - Term 128912 - 128943 0.4 142 70 Op 2 . - CDS 128980 - 131388 2358 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing - Prom 131595 - 131654 10.4 + Prom 131492 - 131551 6.4 143 71 Tu 1 . + CDS 131783 - 132940 1112 ## COG1929 Glycerate kinase 144 72 Tu 1 . - CDS 132937 - 133503 483 ## COG1309 Transcriptional regulator - Prom 133534 - 133593 7.8 + Prom 133535 - 133594 5.9 145 73 Op 1 . + CDS 133626 - 134408 180 ## PROTEIN SUPPORTED gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 146 73 Op 2 . + CDS 134446 - 135051 801 ## COG0778 Nitroreductase + Term 135070 - 135127 11.2 147 74 Tu 1 . - CDS 135167 - 135784 547 ## ACICU_02890 TetR/AcrR family transcriptional regulator - Prom 135861 - 135920 8.6 + Prom 135733 - 135792 6.5 148 75 Tu 1 . + CDS 135893 - 136756 526 ## COG3687 Predicted metal-dependent hydrolase - Term 136842 - 136876 -0.4 149 76 Tu 1 . - CDS 136922 - 137254 166 ## ACICU_02892 transcriptional regulator - Prom 137287 - 137346 6.6 Predicted protein(s) >gi|333032475|gb|GL891951.1| GENE 1 3 - 306 166 101 aa, chain - ## HITS:1 COG:YPO2102 KEGG:ns NR:ns ## COG: YPO2102 COG5556 # Protein_GI_number: 16122341 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 1 100 1 100 149 103 53.0 8e-23 MAALKEPVKIFIVQALACRDTPQEVVEQVKQEFGVDISRSQCECYDPTKYSGRNLSKKFV ELFELTREKFDKGLIDIPIANKYYRLKQYQRQLEKTRNVKT >gi|333032475|gb|GL891951.1| GENE 2 365 - 772 275 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02745 NR:ns ## KEGG: ACICU_02745 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 135 79 213 213 297 100.0 1e-79 MVLGQCEKVMFNVGGWRKARQEQQMRDWFGFVPTYLITVDASFCERANDTEFCYLLEHEL YHIGVMRDEDGEIVYSDSSGLPKHYLAGHDVEEFIGVVKRWGPSKNVKRLIEVAKNPPFV SDLDIARCCGNCVIN >gi|333032475|gb|GL891951.1| GENE 3 1001 - 1468 295 155 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02746 NR:ns ## KEGG: ACICU_02746 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 155 1 155 155 296 100.0 2e-79 MDSNDYFWLTRKKEPRTKPKSRPLPKATQKYLEAEEEFTHALDVLEIKYEKKFKFKSTKH WRFDFHLIEHRILVEIAGGPWSGGRKGKLKDKAWSMDRYDDAEAMGYTVVRLEAAPSFKI NESGPLQIQAHFASQWLKNLKRQIFNGSDQTVSTN >gi|333032475|gb|GL891951.1| GENE 4 1641 - 1844 167 67 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02747 NR:ns ## KEGG: ACICU_02747 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 67 1 67 67 82 100.0 8e-15 MRMSRLLLATTAGLMALNTKLSVLSALVASCGHASPLSCKANTVKSKPNKLSQKKKRLIA RRLNKHK >gi|333032475|gb|GL891951.1| GENE 5 1946 - 2716 343 256 aa, chain - ## HITS:1 COG:lin0088 KEGG:ns NR:ns ## COG: lin0088 COG0338 # Protein_GI_number: 16799166 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Listeria innocua # 4 212 2 215 270 90 30.0 2e-18 MKSKPIIPWQGGKTRLAKDLLCKFPEHSCYVELFCGGAALFFLREGPARTEVINDLNGEL VNLYRVVQNHLEEFVRQFKWCISSRQIFEWEKLKVPDTLTDIQRAARFYYLQQHAFGGKV SGQTFGYATTGRSLNLLRIEESLSAAHLRLNGVYIENLSWDICFDKYDREHTFFYADPPY LDTAGYGVDFPLDQYELLSEKMKTCKGKVMLSINDHEKIREIFKGFNFACTSINYSVGRD LAAKSKKSNELIIMNY >gi|333032475|gb|GL891951.1| GENE 6 2902 - 3132 313 76 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02749 NR:ns ## KEGG: ACICU_02749 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 76 1 76 76 77 100.0 1e-13 MTMTNAELENEIKALKTQITSLQGTVSNKADATAVSALNARVTSVEGVNTSQGNSITTLN NGLNAVSTRVTALENK >gi|333032475|gb|GL891951.1| GENE 7 3313 - 3876 455 187 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02750 NR:ns ## KEGG: ACICU_02750 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 187 1 187 187 382 100.0 1e-105 MTTVVMDWSRFSIFEWFVCGLNPKSPSFGAANVRCTDGRSIDFHDKLGVVAAMGDQLTKS VAMVIMTEGKSQRDYEYVRNHLAKIMIDGAEKDKRREPKGIAIYHLAWLIARIVIDFALD PELENAHKDPGRLVYAGIRSFQMDPEVYRKTWKRYEDMMIAALNEEILKATVIAERYKKE TLNEARN >gi|333032475|gb|GL891951.1| GENE 8 3898 - 4182 232 94 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02751 NR:ns ## KEGG: ACICU_02751 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 94 1 94 94 186 100.0 4e-46 MSDIETVGWTADKRFFILKINMETSLTTDDCEVLAGLFVEKYSLEFSGCQFHGKLAVICG DKVYVNPWALDQEASVDEPVEELSFSEFQTLLNN >gi|333032475|gb|GL891951.1| GENE 9 4192 - 4599 286 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02752 NR:ns ## KEGG: ACICU_02752 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 135 1 135 135 242 100.0 3e-63 MTSMSLADYHSKFPNGHKAKKGRNKFNASKVTLDGMTFDSKKELKRYIELKAMQQRGEIF GLEHHAKFELAPKTKIEGEKRTKPALRYFADFTYYLINGEYIVEDVKSIATRKLPSYRNK KHLMKTVHGIDIREV >gi|333032475|gb|GL891951.1| GENE 10 4596 - 4997 273 133 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02753 NR:ns ## KEGG: ACICU_02753 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 133 1 133 133 228 100.0 5e-59 MSENKLSPRQLVLIRRAAEDAIHACNRHYGPFVDYVAHPLNIISLVDMAQESLHQQELIK QKDTVIKFANSMANLDQQKFKELQERINLALQQIQGNLQYVEQDKRENFEFLQMAMIRAF KELEKVLNGGEPK >gi|333032475|gb|GL891951.1| GENE 11 4984 - 5166 197 60 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02754 NR:ns ## KEGG: ACICU_02754 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 60 1 60 60 95 100.0 7e-19 MNKPLETFDIDAAKARYEKLRGRYNRSGLSNTDYNELLQLEKAIEQAKKVNEGAPIDERK >gi|333032475|gb|GL891951.1| GENE 12 5163 - 5561 293 132 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02755 NR:ns ## KEGG: ACICU_02755 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 132 1 132 132 276 100.0 3e-73 MKLTKQQRAELKQKFGGHCAYCGEMLGDKWHADHIEAVKRDLIHVGGGKLITGEMTRPQN DTLENMNPACVPCNTNKSSMPLEGWRRMLTHYRDVQLLRDSTHARHLLRFGLIEIKSEPV KFFFESYKEGQS >gi|333032475|gb|GL891951.1| GENE 13 5573 - 6439 469 288 aa, chain - ## HITS:1 COG:XF1763 KEGG:ns NR:ns ## COG: XF1763 COG0175 # Protein_GI_number: 15838364 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes # Organism: Xylella fastidiosa 9a5c # 5 238 13 253 280 83 27.0 4e-16 MKKVISFSGGRTSGYAVNLFKNDPDAYFIFMDTGAEHPATYQFIKDIVKHWKINLVCLRV VVNPQMKKGVGYKIIPLDELKQDLEPWRDMLKKYGSPYYDMPFCTARMKTEPFEKYCNDV FGKNNYERWIGIRSDEPKRLPIEVLEKLGLPIHKDAKKQKAGFRYLAEISDFTKEDVLDW WEQQPFDLAITEHLGNCVFCIKKHLNKVALAAKDEPEQAVKWIAVTEGENVRSEGRKYNH HRMYRTRLHLSDVIEAFKNHDRDELYNALRSSKRYETGSCTESCEAII >gi|333032475|gb|GL891951.1| GENE 14 6436 - 6894 360 152 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02757 NR:ns ## KEGG: ACICU_02757 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 152 1 152 152 298 100.0 7e-80 MITLNKTTGIQKLKEILQEFDSCMYIERDNFFDKHYDLVKSESDIEQIRIAVKAAELKRG TRVKVNFTHVPDKGQNKIHFVGNGTVDLFEDNRVFGRLDDGRPFCCLVSDIEILVSEKLE KEDGYEESKAVNKVYFFLCLVLGCAVVKGCGL >gi|333032475|gb|GL891951.1| GENE 15 6891 - 7994 622 367 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02758 NR:ns ## KEGG: ACICU_02758 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 367 1 367 367 685 100.0 0 MSKYVPNSFQVANAFVDEAMSKISDASVKIYLIINRKTRGWAKECDALSLTQLEELSGKS HPTVVRCTKELVKVGLVRKHEQSVYGNVYSLIDNYFVGEHVNFPNKSSVLVQSFSLFNGQ LVKIFNYQKPVSKKSVKSKKSKNLCLNFPQKSRLLVKNFNYLENTSQLNFLTTASKNFLP LLVKIFNTQNTLSKPTYQNKKNTWFVLENLKFEICSINPSIDTDEIFKASWFERELKAFK GFNEGRNHSDYDMVRFFAEWMLKARAKYAKMKTPAPRQNNYSNGQSAKPANQIPEVITFA SEKQLFAFARRLVNHPDFKDTFCHTGESWMDAGKRMAQKLVDPQEQKPFIPYLIEMGFKN SSKETAA >gi|333032475|gb|GL891951.1| GENE 16 7991 - 8845 279 284 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02759 NR:ns ## KEGG: ACICU_02759 # Name: not_defined # Def: phosphoadenosine phosphosulfate reductase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 284 1 284 284 585 100.0 1e-166 MIPQELINEIRQNALFVINHSGGKDSQAMMIKLLEFVPKEQILVVHASLGFMEWPGALEL AQSQAAAAGVDFIVAKASKTFLDMVLKRFSERPEVPSFPSPKYRQCTSDLKRDPIKREVR RYAKANDFNRIVNCVGLRAEESSHRAKQMIFKPAAENGKAGRTWHDYLPIHSLTTNEVFQ TIKNAGQSPHWAYQDNDRLSCITCIMASARDLINGATKNPEFYALMCLVEQITGYAMHAS LRFLPDLTGIHPNYSLLSEYQDLVSKFSNTRSNRKRIQMLEVAA >gi|333032475|gb|GL891951.1| GENE 17 8842 - 9168 309 108 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02760 NR:ns ## KEGG: ACICU_02760 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 108 1 108 108 202 100.0 4e-51 MSTVSNQMNKDKLLELKRQQSYQSWHGPALKTLADLLKERKANLKKRNHDENQAAVTRDE FMQGLVNDHGVHGINLYHAGVIISSLYRAKKIRYLGSFIQIIEGDGGA >gi|333032475|gb|GL891951.1| GENE 18 9187 - 9501 77 104 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02761 NR:ns ## KEGG: ACICU_02761 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 104 1 104 104 185 100.0 4e-46 MQNFKTHSKPSKKLLVPMSTRVPVEVQELVDELVGSHERGRAKWIREAINLKLEVDLGQS SIDELKKSKNTMNSSEYLSVFKSIFSLFHTSKKPDVRDRALGVH >gi|333032475|gb|GL891951.1| GENE 19 9620 - 9868 184 82 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02762 NR:ns ## KEGG: ACICU_02762 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 82 1 82 82 140 100.0 2e-32 MTSVQETARIKNQVSSLLAYMKKLGSDSEVQAFAEKCGTTKGNLLQIAYGGSVSPILSKK ISNQSGGEVLLSDLRPDIFSET >gi|333032475|gb|GL891951.1| GENE 20 9986 - 10762 506 258 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02763 NR:ns ## KEGG: ACICU_02763 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 258 1 258 258 499 100.0 1e-140 MDISAIRKANLIKLLEKYSTQKEFAELVDTPTSYITQITQGTLGKNGKPVSLGNTVARRI EKMLNLEHGFMDVDHSTDHNNIVPFNPQVNPKSDDLRISPVEFKSSFENKNTIKIPVHKN VRASCGDGVANFLEDVTDYLEVDPNFLRLMGINIKPERLRIIYSTEYSMWPTVVPDSPLF VDTTPVDTSAMISGDVYVFMHNSLLRMKRVFISYGDEKTVRLQSDNPDKKKYPDEIITRE QLNELVFLGRLELSLVKP >gi|333032475|gb|GL891951.1| GENE 21 10980 - 11168 198 62 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02764 NR:ns ## KEGG: ACICU_02764 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 62 1 62 62 110 100.0 2e-23 MKQNTIQSQTTARLFQHPTAEEQRPSRLATIKANAIDFIKFIALSIVLWIVISNLVVWMF GG >gi|333032475|gb|GL891951.1| GENE 22 11171 - 11491 311 106 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02765 NR:ns ## KEGG: ACICU_02765 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 106 192 100.0 3e-48 MKKRYTTPFREFITRDDNGRYHVRLGPQVFSTNLKLDDIRIEGENGSTPVTEGLLKQRPW ILRNLEQEVKEQRKKEREAIFSKDCFKRTPYSANQKIAYKNARYNG >gi|333032475|gb|GL891951.1| GENE 23 11506 - 12540 871 344 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02766 NR:ns ## KEGG: ACICU_02766 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 344 1 344 344 612 100.0 1e-174 MNAAINPDVLGNATTVNPLDLPGLEQVFHHPTFIKVVNELKAPKSHTNEFGGGYKYRSAE DIQEALKPLLVKYKCTVITRKFDTADGFEIYAYMVFKDQKYIRCDVPGEAKYDFDRDLNS NKKVSKTQQYASYQSYAKKYALGNLLMIDDSQNDLDTHTNNNIKNERQRDNTQKYQNQSN NGYVATKADCDKALKQIKDLPLDTPLTQASYFFDGIRNQLPEFDEILFAACNEKYLVIQQ HLESLSQKQQEAVQSNGTAQQQKQQAQQQRGNTTQAQNPPNAPKTGCISNKQRDQLQAFI DERGLDVKYVCEFLGIDTLADIQAEKIELAKAEIDKLAKQEIKA >gi|333032475|gb|GL891951.1| GENE 24 12537 - 13166 254 209 aa, chain + ## HITS:1 COG:STM1878 KEGG:ns NR:ns ## COG: STM1878 COG0847 # Protein_GI_number: 16765220 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Salmonella typhimurium LT2 # 5 168 4 155 232 60 30.0 2e-09 MSALILDTETSDFEKFPIEIAHVPVSFLDSGELFVDKDACFDEYFSCPEPISFGAMAVHH ILETDIADKPSYETFRLPKDVQYIIGHNVDYDLRAIKLADKSVNAKSICTLALSRLVWPD AAHNLSALIYMLSNGSVKARESIRNAHNAKQDVLLTAVLLKQICKALGIKDMQSLFLFSE QARIPKKLLSASIKVWTLKTYLLITSPGY >gi|333032475|gb|GL891951.1| GENE 25 13221 - 14573 1072 450 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02768 NR:ns ## KEGG: ACICU_02768 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 450 1 450 450 776 100.0 0 MNILNNVEAFAALQSGKNLLCRHIEGEFAELNEFPATVFGNPEYQFCIDIEKIELAGFTF TKPCTLDELVDEQKVFWVDFSKSTIIAGDFSSKNTYLVTLVNNGVVQRDFENAQLFLKGF QAFVGINQEITLTTCDPIFNDANEDEDLSTETKSVKSKGKKKTKEVSADPQLLETEKDII LDGISSSKTECEIDSLCFGLEKHSFTPDQLKAIEDAKNTKLAELAEIKSKAEDEKHDLLN LAEAKTQDPELSVLCEAFIDEISNSKSKEDLDFIRARINSNGVLTEVENAELNTRLNIKA KSFEKVDVYVNVPDASQNNGKKYIEEEEGKYQKKLAELKKRVDESKTVTEVNAVTKYTNS WSAEQRAPLLQYMHKRLEELKKEKQANEPSLLVKIQNAPDLATLDAYEIDIHSLDPLAQP KMMQAVTARKLELEKPNTSSSIYLIDEDLP >gi|333032475|gb|GL891951.1| GENE 26 14713 - 14916 90 67 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02769 NR:ns ## KEGG: ACICU_02769 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 67 1 67 67 119 100.0 4e-26 MRKVVKRKNLLAFKIWLAHLGYQVRDMEDGRGFNFRFKKQYGMVTRELVGNSLAQTLGKE FEEHLKS >gi|333032475|gb|GL891951.1| GENE 27 14948 - 15820 702 290 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02770 NR:ns ## KEGG: ACICU_02770 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 290 1 297 297 512 97.0 1e-144 MNSAAEMKRITEIKTFEEYKSKVAQALKNDAFGLTVSQLMTICKLSAKTVKQVLDNLEVE KCGDTYTLVGMQSALQNTTPRIEVLKVNTKPNSFNPVEVSPVSPQPSLQEKDYSQMNDEE IRSLISLKRRITAVIIHHERLGLKQMMEISGATKEELLAEALSLSRKAMVKFVAKAGADF YESHKVDEESLPVANEDLPLKIEDLPLKNEELPQKNECFAMTSNDANPKPQLINTFRSLV KKKQIIEKELFLDSDQLADLLQEIFGLNNITWDMRGRILMGVRLSSTEVI >gi|333032475|gb|GL891951.1| GENE 28 15822 - 16034 119 70 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02771 NR:ns ## KEGG: ACICU_02771 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 70 1 70 70 104 100.0 1e-21 MKGVIISEEELDKALETGTSYREILDHVFLVIIEKALIKSRGSKNKAAAMLKLNRGTMNK VLARRKKEAN >gi|333032475|gb|GL891951.1| GENE 29 16035 - 16319 274 94 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02772 NR:ns ## KEGG: ACICU_02772 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 94 1 94 94 172 100.0 3e-42 MAAAQKIDDPFDTLLLLQMKYRKPVVTLEELLPDYLPHLSPPQANKRANKCDLPFPVFKP DGKYSPWCAHLNDVALWLKSKQEEARADWRAMHS >gi|333032475|gb|GL891951.1| GENE 30 16387 - 16488 110 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYIGPYQLSNNLIVAPMAGGVDILLSIFIINNL >gi|333032475|gb|GL891951.1| GENE 31 16572 - 17780 1124 402 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000951 NR:ns ## KEGG: ABBFA_000951 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 402 1 402 402 800 99.0 0 MNKPLSSRFLFKSFGMVAVCMSLAACGDKAWWSNNDEPELESQQIKRLIPSRVYDRESWA KDIDDIMKDLDIPKTKQNVCSIVAVVDQESNFVANPQVPGLGQKAVEEVSTRLNEKFEDK LGKTIGGTIAGYFEEVLRTQPSPDNNYMSQMRKVKTEKDLDLLYREIFDFMAKHYHVSAL TGAAKLVGQDIGEKMNPITTLGSMQVHINYAKANKRSSMNTAALRDDLYTEYGGLYYGIH RLMVYPADYDKAIYRFADYNSGMYSSRNAAFQKMLKELTDKDISLDGDLLLYTKDGDPRA TQSESEKELITVFASNNVLVTPRQIRDDLKLEKEKKFESTQTYIALTKLYKSKTGKEPLY AIMPQVVISGPKLSRDYNTNWYATRVNGRYETCMQRAKRIRL >gi|333032475|gb|GL891951.1| GENE 32 17747 - 18403 513 218 aa, chain + ## HITS:1 COG:PA5547 KEGG:ns NR:ns ## COG: PA5547 COG0560 # Protein_GI_number: 15600740 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 5 200 6 202 207 85 26.0 8e-17 MYATSETNKTIKNLALFDFDGTLCSKDSFTGFIFYALSKRHIVKQGLKILPWIQAYYLNF YPAHAMRAKLFRSMFRDTPAIELQRLGEEYAQELVSALSPEIFAQLQQHQLLGDQVVLVS ASIDIYLAPLCKLLDIELICTETQIKNGMMTGYYSTPDCSSEQKKLRIHEQYSLKHYQRI YAYGNSSEDLDMLSLATHPFMVGEDRILPSLTPQKKLA >gi|333032475|gb|GL891951.1| GENE 33 18430 - 19563 1160 377 aa, chain - ## HITS:1 COG:PA4565 KEGG:ns NR:ns ## COG: PA4565 COG0263 # Protein_GI_number: 15599761 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Pseudomonas aeruginosa # 10 376 4 371 372 388 56.0 1e-108 MIEVVDGQRKLSECKRIVVKIGSSLLTANGQGLDLDAISHWAKQIADLHNAGHEIILVSS GAVAEGMVRMKLASRPTDLPSLQACAAIGQMGLIHTWSSVLENHSIRTAQVLLTHDDLAD RRRYLNSCDALQNLIDWRVIPVINENDTVSTDEIRFGDNDTLAAMVAGQVHADLLIILTD QQGMFDSDPRHNPDAKLLSTVRAMDDVLFEMAGGGGVLGRGGMVTKVRAARLAAKSGCPT LIASGESDNVLSRVMAGEMLGTLFTTDKDRMTAHQQWLAAHLQTAGRLVIDDGAVEAIKL KHRSLLPVGVKTVEGHFDRGDVVECVDKQGKRVAVGRVNFSSRSAEIIKGLSSDKVYQVL GEARSLEMIHRDHMAIY >gi|333032475|gb|GL891951.1| GENE 34 19579 - 20799 796 406 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915191|ref|ZP_01903719.1| 50S ribosomal protein L27 [Roseobacter sp. AzwK-3b] # 1 338 1 332 345 311 49 1e-83 MRFVDEAVITVEAGDGGNGVASFRREKFVPFGGPDGGDGGRGGSIYIQADDDTSTLVDYR YTRKFRAERGKNGAGANCTGRGGEDVVLKVPVGTTIVDTDSGDIIGDLVEDGQRVMVASG GEGGLGNTHFKSSTNRAPRKCTTGTKGEFREIRLELKVLADVGLLGMPNAGKSTFIRAVS AAKPKVADYPFTTMVPNLGVVDADRHRSFVMADIPGLIEGAAEGAGLGIRFLKHLARTRI LLHIIDVQPIDGSDPAHNAKAIMNELAKFSPTLAKLPIVLVLNKLDQIAEESREEWCQHI LDELQWTGPVFKTSGLLEEGTKEVVYYLMDQIEQQREREVEDPEYAAEVRAFREQLEAET REQTIAAKEAYRAMRKAQRLESMMDDDDDFDDDEDDGDVESIYVRD >gi|333032475|gb|GL891951.1| GENE 35 20964 - 21638 432 224 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000947 NR:ns ## KEGG: ABBFA_000947 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 224 1 224 224 414 100.0 1e-114 MFGSLKSILISFFLIMILTAILFWFYLNIQASVVVSAHESDIRLPESLETKIHVGNNLQV QSIGKLDTSIDIDRQISVPLKGRYLADLEFEVETPITVSVDYATTLKVDQVMPLETTTDL IYKNKLLPRFPLKLNIPIKLDIPFQLKRSYTIPVKIAFNGPVYFEFDESINLPIKHQFNP SLNVNDAMEMGNISSFNAIMYNSVQHTKANLDMKMDLPLRNVHP >gi|333032475|gb|GL891951.1| GENE 36 21650 - 22273 550 207 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000946 NR:ns ## KEGG: ABBFA_000946 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 207 38 244 244 337 99.0 1e-91 MKNQAVAIDLQEPLQVQVKVKDALNVDVKGRVNANIPINEKLNIPLTQTLTPRVYFDNMV PISTVIPVKETLKVDQSLPIDTKVQVRVLGKDITLPLKGNIPLQLDVPIDIQVPLDQKVH LKFDAPVKTVLKENLHIPLNAQLKTNIPIQGSLNVPVKTALNASVDVKNTLPVKIEHGEL KIPLSSMSLNRVKSGEDHSSPVQNQTK >gi|333032475|gb|GL891951.1| GENE 37 22534 - 23991 1804 485 aa, chain - ## HITS:1 COG:PA3001 KEGG:ns NR:ns ## COG: PA3001 COG0057 # Protein_GI_number: 15598197 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Pseudomonas aeruginosa # 27 480 1 460 461 570 62.0 1e-162 MSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKT HRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVES IKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRASL LRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKW RDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPI LKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKAL PALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNST EVVSSDFIGSRTAGVYDAQATITSGNRLTAYVWYDNEVGYSCQVLRIAEQMCGVSYKKIP AETNA >gi|333032475|gb|GL891951.1| GENE 38 24208 - 25152 793 314 aa, chain - ## HITS:1 COG:HI0680 KEGG:ns NR:ns ## COG: HI0680 COG2962 # Protein_GI_number: 16272622 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Haemophilus influenzae # 1 291 1 290 298 174 34.0 2e-43 MLKGVILSVMASLTFGVLYFYTQLLGQLDSEQTFGWRIIATLPFLTLFMWWSGDLSHIKN IYQRILAKPSLLLLLITTSVLTSVQLWLFLWGPMHGRGLQVSLGYFLLPLVLVLAGSVLY GEKISKFQWVAIVLAIIGVGHEIFRLGSIAWETALVAIGYSAYFLLRKKIKTDNLGGFWW DLLIIMPVAIYLTHTGLLPYSKFLDQPTLGLVIAGLGVLSAIGLGCYILASRYLPLVVFG LLGYLEPVLLALASLVLGESIGKEEWFTYLPIWCAVFVLVLEGAFHLYQQQQKAKNLQLN IEKYQKRLKNDAHD >gi|333032475|gb|GL891951.1| GENE 39 25264 - 25851 594 195 aa, chain - ## HITS:1 COG:mlr4717 KEGG:ns NR:ns ## COG: mlr4717 COG3040 # Protein_GI_number: 13473955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Bacterial lipocalin # Organism: Mesorhizobium loti # 43 193 22 171 183 143 43.0 2e-34 MAFRNNVPQASWRLAKIALGGIVLTGLAVGTYAYAQQKPLPTVDKVELDRYLGVWYEVAR KPAFFQKKCAYNVSATYTLNENGNIVVDNRCYDNQKQLQQSIGEAFVVNPPYNTKLKVSF LPEAVRWIPIIRGDYWILKLDEDYQTVLVGEPSRKYLWVLSRTPHPHKEVVDEYLNYAKT LGFDIRDIIHTEHKE >gi|333032475|gb|GL891951.1| GENE 40 25945 - 27966 2523 673 aa, chain - ## HITS:1 COG:PA3138 KEGG:ns NR:ns ## COG: PA3138 COG0556 # Protein_GI_number: 15598334 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Pseudomonas aeruginosa # 7 672 4 668 670 885 67.0 0 MNENQPFDLVTHYQPAGDQPQAIEKLVNGIEKGFRNQLLLGVTGSGKTYTMANVIAQTQR PTIVMAHNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAINDH IDQMRLSATRALLERRDAIIVASVSAIYGLGDPNAYMQMLLHVVQGDRVSRDEIIRRLVE MQYTRNELEFLRGTYRIRGEIIDIFPAESDQHAIRIELFDDEVDSIRWFDPLTGKMVRKV PRVTIYPKSHYVTPKDNLTRAIDTIKDELQDQLKFFREHDKLLEAQRIEQRTRYDLEMMQ QLGYTNGIENYSRHLSGRPAGEAPPTLFDYVPEDALLIIDESHVTVPQIGAMYKGDRSRK ENLVNYGFRLPSALDNRPMKFEEWERIVPTTIFVSATPARYELEKSEQVVEQVVRPTGLI DPEIEVRPVLTQVDDVLSEINIRKNLNERVLVTTLTKRMAEDLTSYLKEYGVKVAYLHSD IDTVERVKIIHELRTGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI GRAARNVKGKAILYADTITDSMRKAIDETERRRAKQIEFNEQHGITPRSAVRQAVKEIDT GEVLSDDQIDEKVLEQAQALSADERHILSDPKLFSKHITKLEKEMLKASKDLQFEQAARI RDEIVRLKAQMLQ >gi|333032475|gb|GL891951.1| GENE 41 28146 - 28937 759 263 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02783 NR:ns ## KEGG: ACICU_02783 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 263 1 263 263 536 100.0 1e-151 MTYQYHDESIVTELPEDTVFVFGSNMAGQHGSGAARVASQHFGAVEGVGRGWAGQSFAIP TLNEHIQQMPLSQIEHYVEDFKVYAKNHPKMKYFVTALGCGIAGYKVSEIAPLFKGIHHN VIFPESFKPYVEEDAVSQFPTLTQKMVQSFINDEVIFYFNHASESFEDALDKTDLSRAEK AIALIVLNEELYPRDRYGRGRDHELRDILGKLNGKIFNIHGNSEGAMIFVSVIVALMELY DFDEQDFIKLWRGEKNIDHPINR >gi|333032475|gb|GL891951.1| GENE 42 29106 - 30542 1189 478 aa, chain + ## HITS:1 COG:AGl3214_1 KEGG:ns NR:ns ## COG: AGl3214_1 COG2202 # Protein_GI_number: 15891726 # Func_class: T Signal transduction mechanisms # Function: FOG: PAS/PAC domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 311 27 336 336 377 56.0 1e-104 METLDSSIFDLTPIPMWIEDFSEVKQLFDLWRNQGVENLYEFLSQNENLVVECAHKIKII KVNQKVLDLFEAKNQEELCANLNLIFKKEMFEAHIHELEALWNGKTHFSSTTINYTLSGK RIDVQLRGAILPGSETTFDRILITTEDITPYQNALRQEEKNRRLAESMFIYSPTSLWVED FSRIKNRIDQLRLLGIEDFRTFLDVHPEFVRQCIEDILILDVNQSTLDLFKAPDKTTLLK NTHKIFAKEMVETFREQLIELWQGNIHHKREAVNYALDGQIRNVLLQFTVFPGYEETWGL VQVALTDITARKKAENYLEYLGQHDVLTKLYNRAFFTEELNRLNRSIIRPVSSIFLDMNG LKETNDQLGHDIGDGLLRRVGNILNQAIMNTAYTASRIGGDEFVILMPGADEANVLMMLQ TIQELFNIDNQYYSSHPISIAIGHATTKENEQVEDMLKRADHHMYQKKKSYYQEILLP >gi|333032475|gb|GL891951.1| GENE 43 30577 - 30756 218 59 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0967 NR:ns ## KEGG: ABSDF0967 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 59 1 59 59 81 98.0 1e-14 MTEQQPKQKKALVKLPFPMPNESNQAGDAVHNQVRPKPEQYADRTWMPPRGTRRSMGKR >gi|333032475|gb|GL891951.1| GENE 44 30964 - 32199 1593 411 aa, chain + ## HITS:1 COG:CC1534 KEGG:ns NR:ns ## COG: CC1534 COG0436 # Protein_GI_number: 16125781 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Caulobacter vibrioides # 12 395 11 400 400 424 58.0 1e-118 MDVRLSDRVNAIKPSPTLAVTNKAAELKAAGKNVIGLGAGEPDFDTPQHIKDAAIEAINN GFTKYTAVDGTPGLKKAIIAKLKRDNNLDYQPNQILVSCGGKQSFFNLALALLNKGDEVI IPAPFWVSYPDMVIIAEGTPVIVKCGEEQRFKITPEQLEAAITPNTRLVVLNSPSNPTGM IYSKAELEALAEVLRRHPQVFVASDDMYEPIRWEDEFYNIATVAPDLYDRTIVLNGVSKA YAMTGWRIGYAAGPAKIIGAMKKIQSQSTSNPTSISQVAAEAALNGPQDVLKPMIEAFKR RHDLVVNGLNDIKGISCLPADGAFYAYANIRPLIRAKGLKSCTEFSEWLLEETGVAVVPG DAFGLGGFMRISYATADEVLVDALARIKKAAESIEGVDAAIASIEAEKAAK >gi|333032475|gb|GL891951.1| GENE 45 32252 - 32662 295 136 aa, chain - ## HITS:1 COG:AGc2344 KEGG:ns NR:ns ## COG: AGc2344 COG3791 # Protein_GI_number: 15888600 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 132 9 136 142 103 37.0 1e-22 MNGQCLCGETAFEVELKNHDVHVCHCSMCRRQTSGVIMTVDVVKGSLKFIQQKHLSVFNS SEWGERGFCNACGTIIFWRTKDQSYCNINVFSLNEPVKDLKLDMEIFIDSKPDFYNFQND TKKLTEAEVAALFNLE >gi|333032475|gb|GL891951.1| GENE 46 32848 - 33285 602 145 aa, chain + ## HITS:1 COG:RSc3389 KEGG:ns NR:ns ## COG: RSc3389 COG2050 # Protein_GI_number: 17548106 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Ralstonia solanacearum # 16 119 1 104 182 128 59.0 4e-30 MKNPMEMTGLEFLQAMIEGHIPPASISKTIPMQPTEISEGSVTFKAQADHNHLNPLGGVH GGFAATVLDSVTGCAVHTMLPAGVGYGTIDLNVKMCRPLPQNQVLIATGKVINLSKNLGI SEGKITDEEGKLYAYATATCMIIRP >gi|333032475|gb|GL891951.1| GENE 47 33300 - 33728 420 142 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0948 NR:ns ## KEGG: ABAYE0948 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 142 18 159 159 278 100.0 7e-74 MKTLTVASIFSNFDFYQRNYLNILNQPESYYTPVEDAWIDAFPFKKQDLYLGDLLQLWFS SKWDVHTSLKVLKCSKVVDQSKPLYIFQLEGELFLGKNKVLAWSTQHHKVIELQLKNIWA PYVVAKTCDRPDIPYLMKKAAV >gi|333032475|gb|GL891951.1| GENE 48 34222 - 34980 894 252 aa, chain - ## HITS:1 COG:HI1430 KEGG:ns NR:ns ## COG: HI1430 COG4221 # Protein_GI_number: 16273335 # Func_class: R General function prediction only # Function: Short-chain alcohol dehydrogenase of unknown specificity # Organism: Haemophilus influenzae # 3 248 6 248 252 336 66.0 2e-92 MLALVTGASAGFGYSISKKLIESGYKVIGCGRRAEKLEELQKQLGENFYPLVFDMTDTAE NINKLFKELPNEFQIDQIDLLVNNAGLALGLEPADKADLDDWYTMIDTNVKGLVTVTRLI LPSMVKKKSGLIINMGSIAGTYPYPGGNVYGATKAFVEQFSLNLRADLAGTGVRVTNIEP GLCGGTEFSLVRFKGDQEKANSLYDKKNPILPEDIANTVAWIASQPPHININRIEMMPTT QTFNPLKVVEVE >gi|333032475|gb|GL891951.1| GENE 49 35274 - 35918 767 214 aa, chain - ## HITS:1 COG:PA1790 KEGG:ns NR:ns ## COG: PA1790 COG4445 # Protein_GI_number: 15596987 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA # Organism: Pseudomonas aeruginosa # 16 213 12 202 207 192 50.0 3e-49 MSSINYDELMQPVLAFLGCQTPKEWLDEAVNNLDILMQDHANCEKKAAGTAMNLMFRYSF FTDLQVKLAQLVREEMLHYEQVLEFMTKRGQEWKGLSAGRYAGGLRKEIRTYEPEALIDV LVIGAFVEARSCERFYALAPRVDDELGRYYRYLLKSESRHFEDYLALALDVAKTAKMKDP EEDIQQRIEHIREVEKNLILTPDDTFRFHSGIPA >gi|333032475|gb|GL891951.1| GENE 50 35925 - 36650 1068 241 aa, chain - ## HITS:1 COG:YPO2930 KEGG:ns NR:ns ## COG: YPO2930 COG0854 # Protein_GI_number: 16123117 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal phosphate biosynthesis protein # Organism: Yersinia pestis # 4 240 5 241 243 298 67.0 8e-81 MAALLGVNIDHVATLRQARGTAYPDPVEAALICEQAGAEGITLHLREDRRHIQDDDVRRM RPLLKTRMNLEMAVTDEMVEFAKEIQPQHVCFVPERRQEVTTEGGLDVVGNFEKVKAATQ ALAAIGCDVSLFIDADFAQIDAAIACGAPTIELHTGAYADATTDQEQQEELARIVKGVEY AASKGLVVNAGHGLNLKNIAPIAAIPQIHELNIGHSIIAESVFVGLAQAVKDMKTAIQAA G >gi|333032475|gb|GL891951.1| GENE 51 36664 - 37377 594 237 aa, chain - ## HITS:1 COG:PA0772 KEGG:ns NR:ns ## COG: PA0772 COG1381 # Protein_GI_number: 15595969 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Pseudomonas aeruginosa # 10 235 10 230 233 107 31.0 2e-23 MMRNEVLHGYMIHHRKYREKSHIVHLFTQEYGRVDGILRQTPPPQYQPIRLQATGKSELK NFTKLEILNQPVFFFGDAFFAGFYLNEIVLRLCPLEEAMPQTFEQYQLTLLQLQQLSSHE NPDLFLRQILRQFEHILLAELGYAIDFSIDSSQKEILSQQFYQFQVNEGFAPVVQASRSS LSGKAILSMLNYEQGQDFSHEQLQLLGKLYRQMITSLLGDRPLKSRQLWIQNTQTQS >gi|333032475|gb|GL891951.1| GENE 52 37387 - 37587 278 66 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02794 NR:ns ## KEGG: ACICU_02794 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 54 1 54 66 83 100.0 3e-15 MKAITSILIIVGCTLMLQGCVYKLVTVPVGIAYKTTKGVVKGTAAVVGAVIPDGDDDDKK EKESEE >gi|333032475|gb|GL891951.1| GENE 53 37606 - 38634 1165 342 aa, chain - ## HITS:1 COG:YPO2719 KEGG:ns NR:ns ## COG: YPO2719 COG1159 # Protein_GI_number: 16122923 # Func_class: R General function prediction only # Function: GTPase # Organism: Yersinia pestis # 40 341 10 300 303 340 56.0 2e-93 MSMHSDQINPDSNENQDPNNLIDQFFSSKGVTIPSDFKSGFVAIVGRPNVGKSTLMNHLL GQKLSITSRKPQTTRHKIIGIDSREKMQAVYVDTPGMHKKEVRAINKMMNRAAHSALRDV NLVLFVIDAQKWTQNDDLVLEKLKNADMPVILVINKADTFGDKREILPLIQERAKLMNFA EIVPVSALRGANLEHLSETIEKYLPYQPPLYSIDQITDRSERFLASEIIREKIMRQLGEE LPYDLTVQIESFKTEEATVNEKTGRLKPACTYIDATIFVDRPGQKAIVIGEKGAKLKTIG MDARKDMEKMFEQKIMLTLWVKVKGGWSDDERALKSLGYSDI >gi|333032475|gb|GL891951.1| GENE 54 38640 - 39344 512 234 aa, chain - ## HITS:1 COG:PM0061 KEGG:ns NR:ns ## COG: PM0061 COG0571 # Protein_GI_number: 15601926 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Pasteurella multocida # 16 233 7 223 225 228 58.0 9e-60 MRRVLTKHQFKLSDPRLLSRIGYQFKQPELLQLALTHRSVSHKYNYERLEFLGDSLLGMI IANYLYHAYPHENEGRLTRMRATLVRQEALGKIATDLQLSRCLILSTGELKSGGHHRESI LADTVEAIIGAIYLDSSDLNLLKDIVLKWYTPYLDHIEPTDQLKDPKSRLQEYLQARKKP LPVYEVVDIQGDAPHQHFKVECLVDGLSKIHGEGSSRRFAEQAAAAEILKLLEQ >gi|333032475|gb|GL891951.1| GENE 55 39304 - 39678 329 124 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000925 NR:ns ## KEGG: ABBFA_000925 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 124 1 124 124 227 100.0 2e-58 MRKAQQGTSYLAILFGVVIFAIAVKAVLAVWPAYWDDRVINNQITELMQQSSADITPQKF MTQMDQRLEMNNIRDLHFKEIAEVFNQPSLTVKKKYEVRKPFLLNIDLVLTFEKSFDKTS VQAK >gi|333032475|gb|GL891951.1| GENE 56 39702 - 40529 839 275 aa, chain - ## HITS:1 COG:RSc1061 KEGG:ns NR:ns ## COG: RSc1061 COG0681 # Protein_GI_number: 17545780 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Ralstonia solanacearum # 42 258 74 294 305 206 48.0 3e-53 MDFDFNLILVPVTLILFAVWLLDKLVFKQRANKGRENENFVITWAYDFWPVLAVVLVLRS FLYEPFNIPSDSMVPTLETGDFILVNKFDYGVRLPIVNKKVIDIGEPKRGDVIVFRYPPQ PTISYIKRVIGLPGDHIVYDHGQLIINGQKIPKVPTQFSREKDALDTPTSIYHKETIGDH TFTMRELEGVNVARQAPFINYVDNGKYANQDGLYWEVTVPKGHYFAMGDNRDQSADSRFW GFVPEENLTGRAFYVWMHKEPGFHLPSFNRNGKID >gi|333032475|gb|GL891951.1| GENE 57 40600 - 42417 2145 605 aa, chain - ## HITS:1 COG:PA0767 KEGG:ns NR:ns ## COG: PA0767 COG0481 # Protein_GI_number: 15595964 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Pseudomonas aeruginosa # 9 604 3 598 599 948 77.0 0 MAQAKKSVDIKNIRNFSIIAHIDHGKSTLADRFIQMCGGLQDREMQAQVLDSMELERERG ITIKAASVTLYYTHPNGQEYQLNFIDTPGHVDFSYEVSRSLAACEGALLVVDAAQGVEAQ SVANCYTAIEQGLEVLPILNKIDLPQAEPERVIHEIEEIIGIEATNAPTCSAKTGLGVEG VLETLVDVIPAPTGDREAPLQALIIDSWFDNYLGVVSLVRIKDGRIRKGDKMLVKSTGQT HIVTSVGVFNPKHTETGVLEAGEVGFVIAGIKDIFGAPVGDTITLSTTPEVASLPGFKKV KPQVYAGLFPIDASDFEPFREALQKLQINDSALFFEPESSDALGFGFRCGFLGMLHMEIV QERLEREYDLDLISSAPTVVYEAVTKKGDTIYIDSPSKMPDGSVVEDLREPIAECHILVP QEYLGNVMTLCIERRGVQKDMKFLGNQVSITFEIPMAEVVMDFFDKLKSCSRGFASLDYN FIRFESSSLVKVDVLINGEKVDALAMICHRNDARHRGIALVEKMKDLIPRQMFDVAIQAA IGAQIIARSTVKAMRKNVLAKCYGGDVSRKKKLLAKQKEGKKRMKQVGSVEIPQEAFLAV LKVER >gi|333032475|gb|GL891951.1| GENE 58 42592 - 43044 403 150 aa, chain - ## HITS:1 COG:PA3130 KEGG:ns NR:ns ## COG: PA3130 COG0824 # Protein_GI_number: 15598326 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Pseudomonas aeruginosa # 5 132 9 137 145 104 37.0 6e-23 MSSIFDLHIQVQPQHIDALGHVNNVMYVQWMQDVAAAHVETLGVGVTKYLELKHAMVAVE HHVQYRKAAFEGEEIVLRTWLDDINALYSFRQYAFFRPSDQAILFVGNTKWACIEIASGR PKRMSPTFTQAYKPLDSSINPLDFTVSYAR >gi|333032475|gb|GL891951.1| GENE 59 43165 - 44541 1579 458 aa, chain - ## HITS:1 COG:PA0766 KEGG:ns NR:ns ## COG: PA0766 COG0265 # Protein_GI_number: 15595963 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Pseudomonas aeruginosa # 6 457 4 472 474 358 41.0 2e-98 MKSRYLQQGMYAAVFTVAAVQANAAVDFSNLVEQVSPAVVSVNVVKKMTQDELLQQQVPE ILKRFFGNQVIIPQQQGPQEKTAYGSAFFISKDGYLLTNHHVIENASRISITLNDRREID ATVVGSDERTDVALLKVNGTNYPALRVGNVDRLRVGEPVLAIGSPFGFDYSASAGIVSAK SRNMSGETSVPFIQTDVALNPGNSGGPLFNQNGEVVGVNSRIFSGTGGYMGLSFSIPIDV AMDVAEQLKTKGKVTRSYLGVMMQDIDRNLADAYKLPKPEGALITQVSPNSPAQKAGLRA GDVILKLNGASVLRTSDLLYALNKVQPNQTVQFEVLRDDKTRNISATLATAPDETPATGN QASASKGPVLGMSIRDLAVPEKNALGIKGGIYVQDVRRGGLASLSNIIPGDVIIQVNNTQ ILNSQDFAKVVSNLPKNTVARVGIIRQGQRAMLGLRIQ >gi|333032475|gb|GL891951.1| GENE 60 44766 - 46415 1820 549 aa, chain + ## HITS:1 COG:PA0761 KEGG:ns NR:ns ## COG: PA0761 COG0029 # Protein_GI_number: 15595958 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Pseudomonas aeruginosa # 12 536 5 534 538 700 63.0 0 MRMDMPNQQTIHHFDVIIVGSGGAGLSLALSLPSHFNIAVLAKAALTEASTFYAQGGVAA VLDETDSIQQHINDTMIAGAHLCEMDAVQHTVEGGRPSVDFLLKQGVQFTLDEDEQLHLT REGGHSQRRIIHSADATGKAISTTLVERAKERKNITIFENYIAIDLITSHKLGHTEQANR AIGLYALDESTEKVHTFLAPFTALACGGAMKAYLYTSNPDIATGDGIAMAYRAGCRVANM EFNQFHPTCLYHPQARSFLITEAMRGEGAYLRLPDGERFMLRFDDRAELAPRDIVARTID HEIKRLGIRHVWLDITHKSPEFIKEHFPTLYARLLELGIDITKDMIPVVPAAHYTCGGVV VDSNSQTDIEGLYAIGETSYTGLHGANRMASNSLLECFVYGMSAAKDIESKFDINFKLPE VPTWDDSQVTNPDEDVVILQNWDELRSTMWNYVGIVRTTKRLERALHRIEMLKREITEYY QDYRVSKNLIELRNLVLVSEMIVRCAMHRKESRGLHYTLDYPETSSEIRKTVLTPPNFAV EQPLVNTSV >gi|333032475|gb|GL891951.1| GENE 61 46470 - 46886 338 138 aa, chain - ## HITS:1 COG:PA4093 KEGG:ns NR:ns ## COG: PA4093 COG2050 # Protein_GI_number: 15599288 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Pseudomonas aeruginosa # 1 136 1 134 138 159 55.0 2e-39 MKSSKEEIVAFLEKEFPQSLEHCTIESVTSKAAVVYYHVDQRHQRPGGTISGPTMMTLAD FALYIAILGEIGIIGLAVTTNFNINFLRKPAGDQDLRSECKLMKVGKSLVVGEVWIYSVG QEEPVAHVTATYSIPPRP >gi|333032475|gb|GL891951.1| GENE 62 47024 - 47623 804 199 aa, chain - ## HITS:1 COG:PA2962 KEGG:ns NR:ns ## COG: PA2962 COG0125 # Protein_GI_number: 15598158 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Pseudomonas aeruginosa # 1 183 4 186 210 166 51.0 3e-41 MFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMS HDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQN FVSRMPEVTFWLDAPIELGMNRARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKR LDATQSPDQVFEQALQYLA >gi|333032475|gb|GL891951.1| GENE 63 47633 - 48703 913 356 aa, chain - ## HITS:1 COG:PA2963 KEGG:ns NR:ns ## COG: PA2963 COG1559 # Protein_GI_number: 15598159 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Pseudomonas aeruginosa # 57 354 38 335 349 268 45.0 1e-71 MPKPPVNAKAKNAKKKGKKTASNFPKKLVLIGCFIVLISIFAILWSSLFKAYPIEGKKQM LSITSGETYSGFIDRLAKENKIHFPIVLKLYQKFMIHDSMKAGVYEIEQGMSVRQVLEML SDADNAQMNRVLVIEGTTFKQLITALKNDKNVKNTILDLPDDQLMKALGIPYHHPEGLFA PNTYFFAKGETDKKILTDLYHRQMKALDAAWAKRAPNLPYKDKYEALIMASIVEKETSLD SELTQVSGVFVRRLKLGMRLQTDPTVIYGMGANYKGNITREDLRTPTPYNTYTINGLPPT PIALPSQKAIEAALHPDDSNNIYFVATGNGGHKFTADLQAHNQAVQEYLSVLRSKK >gi|333032475|gb|GL891951.1| GENE 64 48705 - 49517 733 270 aa, chain - ## HITS:1 COG:pabC KEGG:ns NR:ns ## COG: pabC COG0115 # Protein_GI_number: 16129059 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Escherichia coli K12 # 6 244 5 244 269 139 36.0 5e-33 MWCFKNGQPVETIPLLDRAFHYGDGCFTTIRVFQNKIELKARHWERLKLACQKLSLVADF ELIEQSLQHLQNQNLVLNGTLKIVISRGEGDRGYSLPKHAADIYIWFYPKALEQFQPDFI ECGVLNQALGLTMPSLVGLKSLNRLEQVLLKKEADQQGWVEALVTDVQGYIVEGVSSNCF IRLNDRWITPELRYNGVHGVMRAEILARMQHYGIACEVRIIELDEVPQIQSLFFCNALHP MRVVTQISEQILESQACLNLFHTLNLNQIH >gi|333032475|gb|GL891951.1| GENE 65 49781 - 50788 1236 335 aa, chain + ## HITS:1 COG:CC0286 KEGG:ns NR:ns ## COG: CC0286 COG1613 # Protein_GI_number: 16124541 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, periplasmic component # Organism: Caulobacter vibrioides # 25 329 43 347 349 429 67.0 1e-120 MRFSQLKVGVIAALLSVSSFAAQEFLNVSYDPTRELYTDFNKQFGTYWKQRTGQDIEFKQ SHGGSGKQARAVIDGLNADVVTLALAADIDEIAEKAKLLPTDWQKKLPQNSTPYTSTIVF LVRKGNPKQIKDWGDLIKPGVEIITPNPKTSGGARWNYLAAWAWAKHQAGGNDAKAQEFV RQIYKHTKVLDSGARGATTTFAERGIGDVLLAWENEAHLAIREQPGKFEIVTPSLSILAE PPVAIVEKNAAKKGNLTIAKGYLNYLYSPAGQEIAARNFYRPRNAAVLKKYSNVFKPLKL VTIDKEFGGWTKVQKQHFDNGGVFDQIVKINSAEK >gi|333032475|gb|GL891951.1| GENE 66 50819 - 51427 790 202 aa, chain + ## HITS:1 COG:SMc00505 KEGG:ns NR:ns ## COG: SMc00505 COG3545 # Protein_GI_number: 15965515 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha/beta hydrolase fold # Organism: Sinorhizobium meliloti # 2 173 6 170 184 100 34.0 1e-21 MTHTVIVPGVGGSEHQHWQSWLQRQLVSSSRVEQKNWDRPVLSEWIEQFVNTVQAVQTPV QIVAHSFGCLTSVAALAEHPELQLQVKKLILVAPANPARFGEAGFARHSLTDYKDYFHQL KINVPATLLISENDPWLDFFDALQLAKSWQLTPINLGQVGHINVASGFGPFPDLLNHLLP EDSMCSHSSIDPVKTHFSLKFA >gi|333032475|gb|GL891951.1| GENE 67 51508 - 52341 815 277 aa, chain + ## HITS:1 COG:mlr1667 KEGG:ns NR:ns ## COG: mlr1667 COG0555 # Protein_GI_number: 13471637 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type sulfate transport system, permease component # Organism: Mesorhizobium loti # 3 273 13 283 283 327 63.0 2e-89 MSQRSRVLPGFGLSLGFTLAYVSFIVLIPLAAVFIKSFGIGWDGLWEILTSERILKSLQL SFSSALIAAFINVVFGLLLAWCLVRYNFPGKRLVDALVDLPFALPTAVAGIALTSLYAPT GWIGQYLEPLGIQVAYTPIGITLALVFIGIPFIVRTVQPVLSDIETELEEAASALGANRW QTITKIILPILLPALFTGFALAFARGVGEYGSVIFIAGNQPFKTEIAPLMIISRLEEYDY AGATTIAAVMLVLSFIILFVINLLQAWANRRTGRNVT >gi|333032475|gb|GL891951.1| GENE 68 52338 - 53222 919 294 aa, chain + ## HITS:1 COG:AGc1505 KEGG:ns NR:ns ## COG: AGc1505 COG4208 # Protein_GI_number: 15888163 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 17 282 14 279 290 342 67.0 4e-94 MNLHTDSNALALKLQSRDATREPTWVRYTLITIALIFFLSCLMLPLILVFVEAFKQGLEV YVQALIDPDTLSAVKLTLLTAAIAVPINVIFGVAAAWAVSKFQFKGKAILTTIIDMPFSV SPVIAGLMIVLIFGAQGWLGGWLMEHDIKILYAVPAIVLATIFITVPFVARELIPLMEAQ GTEEEEAAIVLGASGWQTFWKVTLPNIKWGLIYGVILCNARAMGEFGAVSVVSGHIRGET NTLPLHVEILYNEYTFSAAFAVSSLLAFLALLTLILKTWLELHQDKPEPHSTDS >gi|333032475|gb|GL891951.1| GENE 69 53234 - 54295 1517 353 aa, chain + ## HITS:1 COG:RSc1347 KEGG:ns NR:ns ## COG: RSc1347 COG1118 # Protein_GI_number: 17546066 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type sulfate/molybdate transport systems, ATPase component # Organism: Ralstonia solanacearum # 1 349 1 357 372 394 59.0 1e-109 MSIQVKNIEKHFGAFHALKNISLDFPEGELVALLGPSGCGKTTLLRIIAGLESADGGQVL LEGEDATNVHVRERQVGFVFQHYALFRHMTVFDNIAFGLRVRPRATRPSEAEIKKRVTRL LDLVQLGFLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLR NLHDELHITSIFVTHDQEEALEVADQIIVMNKGNVEQIGSPREVYEKPATPFVFDFLGQA NRFEGEHASGIIRIGNDRIELPTTVQAPQGKVIAFARPDELHIHAQPQANTIEATFVREV WIAGKVVAELQDRNGRLIEIALSSEAAKQHAFKPNQTVWVSASQLHLFADQVA >gi|333032475|gb|GL891951.1| GENE 70 54367 - 55290 1206 307 aa, chain + ## HITS:1 COG:ECs2783 KEGG:ns NR:ns ## COG: ECs2783 COG0583 # Protein_GI_number: 15832037 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 1 301 1 302 316 331 51.0 9e-91 MNFQQLRIIRETVRQNFNLTEASAALYTSQSGVSKHIKDLEDELGVQLFVRKGKRLLGLT EPGQSLLSIVERMLVDAENIKRLADDFNKVDEGTLTIATTHTQARYVLPPIVNQFKKLFP KVHLILQQASPVEIAEMLLQGEADIGIATESLTTEENLASIPYYQWQHSIITPQDHPLTQ LDKIDLDALSEYPLITYHGGFTGRSKIDKAFEDAQIDADIVMSALDADVIKTYVELGMGV GIVNDVAYDAERDYRLKQIKTDIFGVNTTWIAVRKGHLLRGYGYEFISLCSPDADIKALK KIAYPDE >gi|333032475|gb|GL891951.1| GENE 71 55379 - 56119 1042 246 aa, chain - ## HITS:1 COG:no KEGG:AOLE_04480 NR:ns ## KEGG: AOLE_04480 # Name: not_defined # Def: putative porin protein associated with imipenem resistance # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 246 1 246 246 445 97.0 1e-124 MKVLRVLVTTTALLAAGAAMADEAVVHDSYAFDKNQLIPVGARAEVGTTGYGGALLWQAN PYVGLALGYNGGDISWSDDVKVNGSTYDLDMDNNNVYLNAEIRPWGASTNRWAQGLYVAA GAAYLDNDYDLTRNVDATRSFRVNNQDFIAGADGVKINGQMSYKNDIAPYLGFGFAPKIN KNWGVFGEVGAYYTGNPTVKLVSSGSAVTTGDQSLEEAVNAEARKIANDDKYKWLPVGKV GVNFFW >gi|333032475|gb|GL891951.1| GENE 72 56414 - 57235 979 273 aa, chain + ## HITS:1 COG:RSc1393 KEGG:ns NR:ns ## COG: RSc1393 COG2171 # Protein_GI_number: 17546112 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Ralstonia solanacearum # 3 273 4 275 275 400 76.0 1e-111 MSQLSTIIEQAFEDRANFTAADCPSEIRQAVEEAIAGLDNGTLRVAEKINGEWVVHQWLK KAVLLSFKLNDNKPIESCDLRFYDKVETKFSGWTEEQFKAAGVRVVPPAVARRGSFQAKN VVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIED NCFIGARSEIVEGVIVEEGSVISMGVYIGQSTRIYDRETGEIHYGRVPAGSVVVPGNLPS ADGKYSLYAAIIVKKVDAQTRAKTSLNDLLRAD >gi|333032475|gb|GL891951.1| GENE 73 57314 - 58024 707 236 aa, chain + ## HITS:1 COG:PA0975 KEGG:ns NR:ns ## COG: PA0975 COG0602 # Protein_GI_number: 15596172 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Pseudomonas aeruginosa # 7 235 43 263 264 291 61.0 7e-79 MASLRSSAIPVSDPASGLRITEIFYSLQGEANASGLPTVFIRLTGCPLRCSYCDTTYSFE GGERLSLEHIIETAEKYQTPYICVTGGEPLAQPNCLILLQRLCDAGFDVSLETSGALDVS RVDPRVSKVLDLKTPTSGEEHRNLISNLDHLTPRDQIKFVICNREDYEWSKQQVEQYQLQ TKVSTVWFSPAFAVEKGAVGLPRLARDLAQWILDDKLPVRFQLQLHKLLWNDESGR >gi|333032475|gb|GL891951.1| GENE 74 58065 - 58736 758 223 aa, chain + ## HITS:1 COG:PA0976 KEGG:ns NR:ns ## COG: PA0976 COG0603 # Protein_GI_number: 15596173 # Func_class: R General function prediction only # Function: Predicted PP-loop superfamily ATPase # Organism: Pseudomonas aeruginosa # 4 220 5 223 224 281 64.0 6e-76 MRPRAIVLLSGGLDSTTCLAWAQARYECIAISFMYGQRSTTELDAAKALAQRAGVEHRVI NIDLANLGGSALTDHNIAVPEQLQEGIPVTYVPARNTIFLSYALAAAEVFNAEAIVIGIN AVDYSGYPDCRPEFIDAFANMARLATKAGVEGKPLKFETPLLHLSKANIIRLGIEHGVDY SQTVSCYQADAQGRACGKCDSCRLRKEGFIDAGVTDPTRYIPQ >gi|333032475|gb|GL891951.1| GENE 75 58750 - 59166 510 138 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000904 NR:ns ## KEGG: ABBFA_000904 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 138 1 138 138 186 100.0 3e-46 MKLLKSNLILSSLFSAAALMAGSAQAAENPVQAAYKSTNVKGALINVCKDQTAKGGKLSS AEVSKFCSCQVEAQGKVTEAQKWEIQSAINAKKSPSSLAFVQQQNRDLKACFGPQLTTKL EKLTEEAMKAAQQQAPKK >gi|333032475|gb|GL891951.1| GENE 76 59258 - 59944 824 228 aa, chain + ## HITS:1 COG:AF0720 KEGG:ns NR:ns ## COG: AF0720 COG2102 # Protein_GI_number: 11498327 # Func_class: R General function prediction only # Function: Predicted ATPases of PP-loop superfamily # Organism: Archaeoglobus fulgidus # 13 225 7 211 214 152 37.0 4e-37 MQDQWKTNAHNRQSIVSFSGGKDSSLALYHAMQTGNVIGLIVMLEEQGQRSRSHAMPLDI IRAQAQAIGLPVFMASSSWNDYENKFINLLNEAKQKGAEVLVTGDLDMPEHGCWHDRVTQ TVGLKLGMPLWLRPHREVVEEFIQLGFQSVVVTVNLKLGMKVEDLGQVLSLEYIQELENR GIDPCGEGGEFHTTVIDGPIFNKAIPVRKLDIVYHEEYAFLPLELDQI >gi|333032475|gb|GL891951.1| GENE 77 59962 - 60423 500 153 aa, chain + ## HITS:1 COG:XF0961 KEGG:ns NR:ns ## COG: XF0961 COG1225 # Protein_GI_number: 15837563 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Xylella fastidiosa 9a5c # 21 149 26 155 159 155 53.0 2e-38 MSENIQLPNQVFPTTHGEVNLAEVDNEWLIIYFYPKDSTPGCTTQAVGFSCLKDQFDVLG ARIFGVSRDSVKAHQNFTEKQALTIDLISDKEEVLCKHFDVIKEKNMYGKKVMGIERSTF IFHNKTLVKSYRKVKAAGHAEQVLEDLKALQTA >gi|333032475|gb|GL891951.1| GENE 78 60545 - 61114 347 189 aa, chain + ## HITS:1 COG:PA1139 KEGG:ns NR:ns ## COG: PA1139 COG2340 # Protein_GI_number: 15596336 # Func_class: S Function unknown # Function: Uncharacterized protein with SCP/PR1 domains # Organism: Pseudomonas aeruginosa # 56 187 149 280 282 107 43.0 1e-23 MNLLKVCTLLPCSLVIAACSVNSSSTPPTLSSSTPQVQKSSIEISCQDLQNSAYRQAVLN AINQIRQDSRQCGQQYFSAAKPLSWNNNLYQGANAHSKDMANNNFLGHVGSTGLDLRARL KKYHMLSKANGENVASGQKTLNEVMAKWIASPLHCSNIMNPRYTEYAIACASDQSAKQRS YWTQQFAGF >gi|333032475|gb|GL891951.1| GENE 79 61185 - 61775 542 196 aa, chain - ## HITS:1 COG:RSp0835_1 KEGG:ns NR:ns ## COG: RSp0835_1 COG1056 # Protein_GI_number: 17549056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinamide mononucleotide adenylyltransferase # Organism: Ralstonia solanacearum # 4 143 8 149 149 125 46.0 7e-29 MYTFDYLVFIGRFQPFHLAHMQTIEIALQQSRYVILALGSAQMERNIKNPFLAIEREQMI LSNFSLDEQKRIRFVHVVDVYNDEKWVKQVKSLVNGVIEPNSKVGLIGHFKDESSYYLRL FPEWVMVELDSLKDSISATPMREAYYLGKIKTDAFPKGTIQFLEEFQNTPLYLQLQQKFL QADHSNIEETVSSHKE >gi|333032475|gb|GL891951.1| GENE 80 61885 - 62685 951 266 aa, chain + ## HITS:1 COG:RSc0476 KEGG:ns NR:ns ## COG: RSc0476 COG1024 # Protein_GI_number: 17545195 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 20 266 10 254 254 177 44.0 2e-44 MTLSCIQQPHQHLQANLEGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVIV LRGAEHDFTAGNDMKDFMGFVQNPNAGPAGQVPPFVLLKSAARLSKPLIIAVKGVAIGIG VTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAET AVQAGLVNEIVEDAYATAQATAQHLTALPLASLKQTKALMKHDLDQIIECIDHEAEIFMQ RVQSPEMLEAVQAFMQKRKPDFSQFN >gi|333032475|gb|GL891951.1| GENE 81 62682 - 62999 389 105 aa, chain - ## HITS:1 COG:PA3762 KEGG:ns NR:ns ## COG: PA3762 COG3323 # Protein_GI_number: 15598957 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 105 1 105 105 121 52.0 3e-28 MLKLIYYVPESHLESTKQSIFAAGAGGIGNYEQCAWQVKGIGQFKPVKGADPYIGELGEL EQVDEWRVETIVLEEKASAVAKALKASHPYEEPAFEFIQIIEVDF >gi|333032475|gb|GL891951.1| GENE 82 63068 - 63190 73 40 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02824 NR:ns ## KEGG: ACICU_02824 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 40 1 40 40 69 100.0 4e-11 MKNKNHIRTMYTRDKGWRLFGLALAIQILFIGANYLAMMS >gi|333032475|gb|GL891951.1| GENE 83 63147 - 63275 92 42 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02825 NR:ns ## KEGG: ACICU_02825 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 42 1 42 42 82 100.0 7e-15 MYLTPYAWIAVGSIFAFSVTTIKIGDQNDEKQKSHKNDVHKR >gi|333032475|gb|GL891951.1| GENE 84 63394 - 64599 1257 401 aa, chain - ## HITS:1 COG:SMc00537 KEGG:ns NR:ns ## COG: SMc00537 COG0477 # Protein_GI_number: 15965535 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 9 378 18 385 412 247 42.0 3e-65 MKSKIHFREFALLMALLMSIVSFSIDAVLPALGEVGRVFELKNNNQTQWVIIGIFSGMTI GQLIAGPLSDAIGRKRILFTGIIIYFLGSLLCFTTQSFEWFLVGRFIQGIGVSGPYVASI SIVRDKYSGAQMARIMSLIMMVFMVAPAIAPSLGQLIIHFFGWRDIFVLYMIYATVVGAW VALRLEETLLPENRLPMRLQAFQDGFKEVVSNKTTMSYLLCAGFCFGGFIGYLGTSQQIF MQQFGKTGQEFSAYFAVLAGVMGIASFTNSKIVMKFGMRPICIYGFLGLCLISLIFLGIQ LIGVTVAFWMFMLYACILFLLFGTLFGNLNAIAMEPMGHVAGMASAIIGAASSVLSLILA SIIGQLYNGTLIPMTCGFVILCGLAFMMTVYENRYLKKSNV >gi|333032475|gb|GL891951.1| GENE 85 64682 - 68515 4859 1277 aa, chain - ## HITS:1 COG:PA3763_1 KEGG:ns NR:ns ## COG: PA3763_1 COG0046 # Protein_GI_number: 15598958 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Pseudomonas aeruginosa # 1 956 1 970 976 1103 57.0 0 MFIVAGAAAHSSFKKAQLLTRLSSISSVQSFDSQWVYLFDQALNEQQHQSALQLLNDGES FELRQPASDEIQILVTPRVGTISPWSSKATDIFKNCNTPVHRLERGLLFTLKGVSEISNE VKQVLHDRMTETVFAQIEDAKALFSETAPKPLNSIDILGQGKEALVKANNEFGFALSEQE IDYLTEAFTRLGRNPNDIELMMFAQANSEHCRHKIFGSEWTIDGEKQPLSLFQMIKNTYK ESPTDVLSAYKDNASVIVGYDTMRFYPKADENGHFVYKYKSQAAHILMKVETHNHPTAIS PFAGAATGSGGEIRDEGATGRGGKPKAGLTGFTVSNLNIPGFEQPWEENYGKPSRMASPL QIMIEGPLGGAAFNNEFGRPALNGYFRTFEQNVNGEVKGFHKPIMIAGGYGNIRPDHVEK DAIQPGDLLIVLGGPAMLIGLGGGAASSVDSGTMGESLDFASVQRENPEMERRCQEVIDT CWRLEDFNPIVSIHDVGAGGLSNAMPELVNDHELGAVLNLRKIPSLEPGMSPMEIWSNEA QERYVLAIRPESLEQFESICARERCPFAVLGEATEARHLTVEDPLFQNNAVDIPMQVMLG GTPRMQRSYETIERKGNEFDASKVDLKDAIFRVLKNPTVASKSFLITIGDRSITGMVARD QMVGRWQIPVADAAVTTTSLQGFTGEAMAMGERPPVALLNPAASARLAVAEAITNIACAN IEQISDIKLSANWMAAAGQKGEDQALFEGVKAIGMEMCPALGIAIPVGKDSLSMRTTWND NGEDKAVTSPMTGVITAFAPVADVRKTLTPELKNLEDSVLVRIDLSKGQFRLGGSILAQV YKAIGSVTPDVDSFDDFKAFFALIQDWNNRGVIQAYHDIGDGGLLATVAEMMFASRLGVA LEDQTTAGLFAEEIGAVVQIKAADWEALQAEVAASSLKDAIAVVGRVNNTDQLSVNGLTL ERAELQQAWSEVSHQIQRLRDNVETADQEFALITDKSHQGLIAKPTFDLNEPIEAPFINS RRPNMAILREQGVNGHIEMAAAFDKVGFNTIDVHMSDLLAGRVSLSDFEGLVTCGGFSYG DVMGAGGGWAKSVLFNAKLRDQFEQFFHREGTFSLGICNGCQMLSQLAPLIPGAEHWPRF HRNMSEVFEARSVNVRVEKSVSVLLDGMEGSILPIAVAHGEGRAVASEADIASLNAANQV ALRYVDSHGNPTQHYPLNPNGSPEAITGVTSKDGRATIMMPHPERTFRAIQHSWKPEEWT EDGAWLRMFRNARKFIG >gi|333032475|gb|GL891951.1| GENE 86 68825 - 70165 1346 446 aa, chain + ## HITS:1 COG:PA3043 KEGG:ns NR:ns ## COG: PA3043 COG0232 # Protein_GI_number: 15598239 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Pseudomonas aeruginosa # 4 440 1 438 443 393 46.0 1e-109 MEQMRWLELLSAVRLGSKKSSTELARSPFHKDYDRIIFSQSFRQLNRKTQVHPLAQHDGI HTRLTHSLEVSCIGRSMGMLAAEKIKDELPVWISPADVGAIIQAACLAHDIGNPPFGHAG EYAIREWFDDASHNDFLKKLTPEEEADVRQFEGNAQGLRLLTRIDYHPDDGGMRLTYATL GAYLKYPWLSKTIASQGDRPSHQRAKFGCYQSEKEILKQIAEQLGLIQLGEYHYCRHPLT YLLEAADDICYALIDLEDGIILNMLNYQEVEPIFLNLIADYGQPEELSLPSSTWQQKISA LRGRVMKRLVDEVTTAFAKHHYEIITGQLKGSLLQYCSPDIAAGIETAKNLAREKIFEHP QKSGLEIIAHQSLQTILDAFVPLTMPHKSLSFKEQRLMSILNLYGARFSNNHYSNIMQVL DIISKFSDHQAYSLAQELQGNKIGLF >gi|333032475|gb|GL891951.1| GENE 87 70257 - 70856 707 199 aa, chain + ## HITS:1 COG:PA0966 KEGG:ns NR:ns ## COG: PA0966 COG0632 # Protein_GI_number: 15596163 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Pseudomonas aeruginosa # 1 198 1 201 201 177 48.0 1e-44 MIGCLIGEVFALEAPTVLLNVNGVGYEIDTPLSTFCQLQKGQKVTLWTHLVVREDAQQLY GFSDAQEKTIFRTLLKVNGVGPKMALGILSTLNVELLVHTIEHDDVNTLVKVPGVGKKTA ERLMIELRDRFKTLAQGTSSAAALPQIQFVSNSPVAEAEAALQSLGYKPLEAQKAVAAVK ADYTESADIIRAALKSMMK >gi|333032475|gb|GL891951.1| GENE 88 70865 - 71869 1435 334 aa, chain + ## HITS:1 COG:PA0967 KEGG:ns NR:ns ## COG: PA0967 COG2255 # Protein_GI_number: 15596164 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Pseudomonas aeruginosa # 3 331 5 335 352 461 70.0 1e-129 MQDRLISGTEKPEDHFDRAIRPTSLADYIGQPVVREQMEIFIGAARGRGEALDHTLIFGP PGLGKTTLANIIAREMGGNLKSTSGPVLERAGDLAAMLTNLEEGDVLFIDEIHRLSPVIE EILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVAATTRAGLLTSPLRDRFGIVQRLEF YSVEDLTHIVSRSANLMDVPITVEGAEEVARRSRGTPRIANRLLRRVRDYAQVKGTGEVN HEMAQRALDMLNVDKAGLDTLDRRYLSMLLERFDGGPAGVEALAAAMAEDSGTLEDVIEP YLIQQGYVMRTARGRIATNQSYLQFGMTPPEPKN >gi|333032475|gb|GL891951.1| GENE 89 72074 - 73408 1254 444 aa, chain + ## HITS:1 COG:CC2456 KEGG:ns NR:ns ## COG: CC2456 COG1473 # Protein_GI_number: 16126695 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Caulobacter vibrioides # 33 430 19 408 412 287 42.0 3e-77 MYKKAALIFPLALISQLSLADWVKDATQQNENQVIQLRQHIHEYPELGNMEFKTSALVQK ELKSYGIQVKTGYAKTGVIGILKGNNPGPIIALRADMDALPMEEKSGVPFASKQKAIYQG KETYVMHACGHDAHTAMLLGAAKILAANKDKISGTVVFVFQPAEEGGADIDNFTHGDQIG SRKMIADGAFKDYKPEAIFGMHVMSGMKSGHLYYKDGAILNSADHLRIQVNGKQVHGSTP WLGRDPIYASAQMINNLQSLISRRTDLTQGMGVISIGNIQGGTAGNVIPEQVNMIGTIRS NNEQIRENILKSLPTLVENNAQANDVTAKVEIAPYAPVTMNNKALTQLIQPTLAKTVGDS NLHVLDHNASASEDFAYYGKLMPSFFVFLGATPENQDLSQAAPNHNPSFIVDDKALKTGT ELHIRFVLDYPNIAKQVQAAWKQS >gi|333032475|gb|GL891951.1| GENE 90 73619 - 74026 471 135 aa, chain + ## HITS:1 COG:RSc0731 KEGG:ns NR:ns ## COG: RSc0731 COG0824 # Protein_GI_number: 17545450 # Func_class: R General function prediction only # Function: Predicted thioesterase # Organism: Ralstonia solanacearum # 5 129 4 131 134 100 41.0 6e-22 MANHFEFNIRVYIEDTDAGGIVYHANHIRYMERTRTEWLRAAGVDHYWHQKDYNFVVYKI DVKYMRPILMDDLITVTARVVSCKAASFVLQQNIYRGEILLASGEVELACLSKDLMPRRL PEEIRDLIRKELEQD >gi|333032475|gb|GL891951.1| GENE 91 74050 - 74748 804 232 aa, chain + ## HITS:1 COG:PA0969 KEGG:ns NR:ns ## COG: PA0969 COG0811 # Protein_GI_number: 15596166 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport proteins # Organism: Pseudomonas aeruginosa # 1 223 1 225 231 195 50.0 6e-50 MATNIESTLHISDLILQASPVVQLVMLILLLASIFSWYLIAKLHMSYKKARQDDEHFQKM FWSGAELNTLYNNAQLNSKRSGLEDIFYQGLSEFFKLKKRQAPTSQMIEGTERILRVGLS RDQGSLEYGLGTLASIGSVAPYIGLFGTVWGIMNAFIGLAAVDQVTLATVAPGIAEALIA TAIGLFAAIPAVLAFNHFTAKSESVYSDRALFAEEMIALLQRQSVGSSQEDA >gi|333032475|gb|GL891951.1| GENE 92 74748 - 75200 457 150 aa, chain + ## HITS:1 COG:RC0423 KEGG:ns NR:ns ## COG: RC0423 COG0848 # Protein_GI_number: 15892346 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Biopolymer transport protein # Organism: Rickettsia conorii # 1 146 1 136 143 102 37.0 3e-22 MAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQANNHPIE SKDMPAMVTIGKDGNIYLQYEDYKDNEPLSLEKLESVLSEAQKQAEQENKQLTVLVNGDK TRPYGEVVSLMASLQEAGLTQVGLLTEPLK >gi|333032475|gb|GL891951.1| GENE 93 75204 - 76550 1527 448 aa, chain + ## HITS:1 COG:NMA0905 KEGG:ns NR:ns ## COG: NMA0905 COG3468 # Protein_GI_number: 15793871 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis Z2491 # 66 337 975 1244 1773 82 33.0 2e-15 MNKNQKPPFKQNAIALSFTLGVHAIAIVGLLFLGLSKPPEQPKKLTTVLVKPEDLPPPLA KEVEQPTVAENQAEEVLSPIVDETLPQNLPAAPPPPTAQQLAAQKQKAEQAQQAKLAEEK RKAEEAAKAKQAAEQQRLEEAQKQQAEAKRQAEAKARAEAEQKRKAEQNAKAEADAKARQ KATEEAKRKAETEARLKREAQKAENAKLQAQQEAKRKAEADAKAKQQKAAEDAKRKAEAD AKAKQQAADNAKRKAEADAKAKQQKAAEDAKRKAEADAKAKQQKAAEDAKRKAEADAKAK QQKAAEDAKRKAEADAKAKQQKAAEDARRKAEIEAEEKAASAKKAQEEAAQKKGEAKKIA SSAKRDFEQKIRRAWDVPTGSSGKTVSVRFTLSDSGSVSSIVITRSSGDDALDASIKAAI QASAPYPMPSDPDARREARSVTSTFRAQ >gi|333032475|gb|GL891951.1| GENE 94 76644 - 77924 1281 426 aa, chain + ## HITS:1 COG:PA0972 KEGG:ns NR:ns ## COG: PA0972 COG0823 # Protein_GI_number: 15596169 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic component of the Tol biopolymer transport system # Organism: Pseudomonas aeruginosa # 31 425 25 429 432 340 44.0 3e-93 MKTSRKHLLALTLLTALSPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGLYPIVET DLNRSGRFTSSSKNLPANAAINQIQASDWQAAGIPYVVTGQIKQTADGFEVHYQLYDVQK QQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQI ADTDGEQPKTVLSSRDPILSPAWTPDAKKIAYVSFETKRPAIYLQDLSTGTREVLTSFKG LNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIF TSDRGGSPQIYRYDFGNGSVKRLTFKGSFNARGTLSADGKKIALVHRPSGSNYKVAIQDI NTGIVNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSIMSTDGRFRMNLPSEQGEVRE PAWAPK >gi|333032475|gb|GL891951.1| GENE 95 77952 - 78515 566 187 aa, chain + ## HITS:1 COG:PA0973 KEGG:ns NR:ns ## COG: PA0973 COG2885 # Protein_GI_number: 15596170 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Pseudomonas aeruginosa # 41 177 28 166 168 127 52.0 9e-30 MKSIKYLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGAS SKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGT REYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYE AVPPLLK >gi|333032475|gb|GL891951.1| GENE 96 78570 - 78758 267 62 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000884 NR:ns ## KEGG: ABBFA_000884 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 62 1 62 62 75 100.0 9e-13 MTTKKFDATPTAGEPINLEEISKESVQEAWKDYEAKPEYKAFNKHDLIESMQHSEEEQNK SS >gi|333032475|gb|GL891951.1| GENE 97 78941 - 79912 1314 323 aa, chain + ## HITS:1 COG:RSc2126 KEGG:ns NR:ns ## COG: RSc2126 COG0158 # Protein_GI_number: 17546845 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase # Organism: Ralstonia solanacearum # 1 323 1 331 338 391 57.0 1e-109 MSNLTLSQFLQQEKGNLTPELAQVIDTIAATCKTIDQALQKGALAGILGSAGNENVQGET QKKLDVISNDYLIDALKVHPHVGGLASEELDDFTPAQENGEYLVLFDPLDGSSNIDINMC VGTIFSILPAKNAVTQAQDFMQAGTQQVAAGYVLYGPSTMMALTVGNGVAFFTLDPETQT FLLTTENVQVSADTQEFAINASNQRHWEQPVKQYIEELLAGKTSVREKDFNMRWVACMVG DVHRILCRGGIFLYPYDLKDPKKAGRLRLMYEANPMSMLIEQAGGASTTGRVRILEIEPT ELHQRVPVIIGSKNEVERVTSYH >gi|333032475|gb|GL891951.1| GENE 98 79969 - 80745 665 258 aa, chain + ## HITS:1 COG:RSc1419 KEGG:ns NR:ns ## COG: RSc1419 COG0566 # Protein_GI_number: 17546138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Ralstonia solanacearum # 6 258 4 257 259 188 37.0 9e-48 MAVIFLESKDNAKIKHLRGLIELNSARKKHQQTVLEGTHLCLAWLQQQKKLFSLFTTEQA LEHPDLKKIIELHQGHVFIISEVLYKDLSTLGNTLPCLAIIDLPKTASTIDYSVDTLILE NVQDPGNVGTLLRSAAAANIKQIICTQGSASLWSPRVLRAGMGAHFSLSCFENFQLTDIL PKFDIPVFVTSSHRSTSLYSKDLSKPCVWILGNEGQGASDYALEHAQSVTIPQPGGQESL NVAIAGSICFFEMVRQRQ >gi|333032475|gb|GL891951.1| GENE 99 80905 - 81519 579 204 aa, chain + ## HITS:1 COG:RSc2078 KEGG:ns NR:ns ## COG: RSc2078 COG1595 # Protein_GI_number: 17546797 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Ralstonia solanacearum # 20 192 3 181 188 91 35.0 8e-19 MDLAPKKSRSEASSAHASTAEQRLKVFMQDVTGRALVMMESATQGQQGIAMDLVQEAFIA LHKSYADRSTEEWYPLFYTILNNKLQDWRRKEARRANPFSFFKKVSLDNDDEEIIDIVDE KAINPADFLDQAVTIEEIQEAIAKLPVRQQQAFMLRAWEGFDTHTTAQIMNCTEGSVKTH YHRAIQGLREYLAHLNPMGGSNES >gi|333032475|gb|GL891951.1| GENE 100 81509 - 81829 341 106 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02842 NR:ns ## KEGG: ACICU_02842 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 106 192 100.0 4e-48 MNHDDFTKKVTSKLDSLAHHHKNKTVVMNHVLDHIQQKPASYYSVWKMTGFALAAAITGF VILPNSIDMLDKPQNQVVVNPKLSPQMVEDLEMLMVLGEDKVQHGS >gi|333032475|gb|GL891951.1| GENE 101 81819 - 82208 443 129 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02843 NR:ns ## KEGG: ACICU_02843 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 129 1 129 129 209 100.0 2e-53 MVAKKLALILCSLSFLQTSFAGFERFWIFSKDANTQVDDTWNALSEEEQRAVIKRYQTLK ELPSNQSANLQQRMDWFNQLPDAEKQKMREAWQKMSTQERNDLRQRMLKASADERTAIRE EYINKYLEH >gi|333032475|gb|GL891951.1| GENE 102 82299 - 84734 2042 811 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02845 NR:ns ## KEGG: ACICU_02845 # Name: not_defined # Def: putative outer membrane protein A # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 546 1 546 556 985 99.0 0 MKNYQKVLGVLTVIAAMPLMAQTTIKVTTFNDEDNENMNTCSLREAITAAEMRKSYGGCE VPAIDQNYTIQLDAGTYTLNKELTPKIALNIIGKEATDWERKGVLTNDYPAQKPLQTRIN AGGKSRIFNTAVYQQSLTLTNIILENGKSAEQGGAIYAGADVTLKNSQILNSQASKGGAI YLGGSTASLTMNHSLVQGNGKASTEGSILAMSCMFNNSYSGRIFSFDSNSFIDNGGINSI SIFDFCGSPTAKFTNNTIAKNLASLTNGNIIKFTGDADPLKNQTSKLSSSSSLTLQNNTI VENSAYTTFLYDKLGTKELNFNILAFNTGSYACKYLLGAAAAEKDTGLNLKFNALNLNGN TPKCDIPTEVISTGNTNIDIKNEVFSNLLEPLKEANENNGFLPIYYPKNNFSATDLIDVD LENKGTCQTQDQRGLSRLVSNTYYYQTLEKSKNSCDIGSVELMKLTAGDLEGLSNISFTT LLETYQKSYDLYDSLLKDPTTPSNFIVYYKVRLAEFKDLLDKFKNDSAHINTKYRAIYID LKNYGFPLPTEDSNHVLKFFNTTDYSVKAEPLGVGQKVEDLTSDTETKKNQRCEWNPTVQ QILFYRVDDDITSSTTYEFCKYTITTKTGVELSSGLIKAKFGNITPVSGDGTITFKYLAN EIIPLNLLKYANDDGDGPVGTLVTKPNKPPFWVNDKGVELPIYLPSKNSKDGIFTVVKAD REGPCPGKDSKNTCYGGNIYIQAKNVFNTFNDTLTYYVYDADGTISAKAGTINLVSTATT TDDSRGGGGGSIGILSIASLLSLIAYRRYRK >gi|333032475|gb|GL891951.1| GENE 103 84750 - 86600 1575 616 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02846 NR:ns ## KEGG: ACICU_02846 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 616 1 616 616 1154 100.0 0 MLKRSIAFALLAAAGHAYSADIEVTSLVDEDKDDTVCTLREAVQFLNYRGSSNAADVEKY VNGYHGCGNKDASSNIILQRDKEYTLNSRITITAPLTISTAKNDSTLLDDQPGSHNATIK MVGKDQLFKIDDGNVEKASFSVSLSDLNLQGAGSNNTVLEGGLIYNHEQLTIRNSRLING YATRGGAIYNAGNLSNTTNTAGTVSLVNNLIQNNKAAQGGILYSEMPLYFITQSVLRDNE VTTADNALFYTQTKFSDESTGGYLTSRAIGISNSTIFHNKGGFIANVRDGMFVNNITMIK NDKGLFLDAPQGNASVSNSILVGNTINCQVSTTDKAIIQSNLVTAECNRNATSKLPNILY PANEKLIAGDSDEGACDITSQTGLLCPYNTPKDSFLGFFRPRLLESYQSLSDSLIINKGR LYSDGSSIGLASCERYDQRGKNRSGYDELCDLGAIEYILDSQIAPVGQDIKYGQVAKFSI LSSLSEADLVTPTTCKRLFGERPDGKEWQPGCLKVTQSTDTPTSKGVITLDQNGNVVYTP NGNWHGADIFRIQVVTSVSRFNDGIEFQYVTIPATVVQEPVSGIEDKSVSTGGGGSVGSG LILGLFGLIALRRFKS >gi|333032475|gb|GL891951.1| GENE 104 86917 - 87615 709 232 aa, chain - ## HITS:1 COG:PA0947 KEGG:ns NR:ns ## COG: PA0947 COG0593 # Protein_GI_number: 15596144 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Pseudomonas aeruginosa # 43 222 49 230 234 84 28.0 1e-16 MRQLQLDIEPQLDARISDFSGPGWGHVVDAVRQLHAGLVNRFYIYGGAGTGKSHLLSAIC DSYLEVGKSAIKVSLLELLDAPIEAITCLEHYDLVALDDIESISGVPHWQKAVFHLMNNH EGQLVFSSRVAPIELKLELPDLQSRLTQAVSVKVPSGSLYADRYALVTSVMARRGIHFDQ QIVDYLLLHGPHQASILLQTVAQLEKLLKGEKTKLSNATLRQIYALIDEYQQ >gi|333032475|gb|GL891951.1| GENE 105 87636 - 88829 1215 397 aa, chain - ## HITS:1 COG:XF0589 KEGG:ns NR:ns ## COG: XF0589 COG0628 # Protein_GI_number: 15837191 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Xylella fastidiosa 9a5c # 4 353 11 360 385 191 42.0 2e-48 MQDRILRRIFLLAGIVLLVWVLYLLKPVVIPFIGAFFLAYLFSPLVEVLVKIKIPRWLAI SIVFIGIGVTLTVALWYLVPLIWKQLVYARDSIPAGIHWINAELLPWISSTFHVQQMEID TDQMSKAVMDYVQTNYSADSIQAVLLKLAQSGLNFIQIGGTVVLIPIIAFYFLLDWDRML QNLRRLIPRPYEATTLQIVRECHSVLGAFVKGQFLVMLLLGVVYAVGLQLIGLEVGLIIG MVAGLASIIPYLGFAVGIIAAVIASLFQFGMDWTHLLLVGVVFMIGQAVEGYILQPFLLG DKIGLSPVAVVFAVLAGAQLAGFLGMLIALPVAAVIVVLLKHLRENYERSSFYAPSSTLL IQEGNIEQLHVETENTKLDLEVKKQQDTDTPNLSDQK >gi|333032475|gb|GL891951.1| GENE 106 88965 - 90035 1839 356 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 1 356 1 356 356 712 100 0.0 MSNSTSTPNTGLSYKDAGVDIEAGDALVDRIKSVAKRTTRPEVMGGLGGFGALCKIPKGY EEPVLVSGTDGVGTKLRLALNLNRHDTIGQDLVAMCVNDLLVCGAEPLFFLDYYATGHLN VDVAANVVTGIGKGCELAGCALVGGETAEMPGMYEGEDYDLAGFAVGVVEQSKIIDGSKV KSGDVLIGVASSGAHSNGYSLLRKILDVKNVDLTQVIDGRPLADVAMEPTRIYVKPVLEL CKQVDVHAMAHITGGGLPGNLPRVLPNGAQAVINEASWEWPELFKLLQREGNVERFEMYR TFNCGVGMVIAVDANDAEKAIEVLNAQGEKAWKIGHIQENAESVEGADEKIRVIFE >gi|333032475|gb|GL891951.1| GENE 107 90032 - 90661 675 209 aa, chain + ## HITS:1 COG:PA0944 KEGG:ns NR:ns ## COG: PA0944 COG0299 # Protein_GI_number: 15596141 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Pseudomonas aeruginosa # 1 205 4 215 222 212 51.0 5e-55 MMKIAVLVSGNGSNLQALIDANLSGQIVGVLSNKADAYALERAQNANIATAVISHKDFPS REDFDEAMHQQLVAWQADVVILAGFMRILTADFVNKWQGKMLNIHPSLLPAYKGVNTHQR VLNTGDRLHGCTVHFVTSELDAGQAIAQSAIEVKEHDNVASLAERVHKLEHFIYPQVAEW LCNGQLTWKNGQAYFRNQILEHPIRFASW >gi|333032475|gb|GL891951.1| GENE 108 90725 - 91534 807 269 aa, chain - ## HITS:1 COG:PA1621 KEGG:ns NR:ns ## COG: PA1621 COG0596 # Protein_GI_number: 15596818 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Pseudomonas aeruginosa # 7 269 5 263 270 152 34.0 8e-37 MSVKPVIHFAHANGVPSMVYQKLFDQLKDEYDVIYVPLIGPDKRYPITNHWPFLVDQVID SIVRQAKGRKVIGLGHSLGSVLTLMSSFRRPELFSQVIMLDPPLILGRYSFAFHMAKLFK PKIVDDMTPAGLSARRREHWESREQAAALLRPKGFYKDFDEDCFQAYIDYALKEDSVRGG VTLTISREDEVAIFRKNPSWWWLPMPKPKMPVHLVVGKESAFLKRGFPQMAKRKMGIPFS VVEGGHMFPLEHPIDTVNYIKELIHRNSR >gi|333032475|gb|GL891951.1| GENE 109 91553 - 92650 1146 365 aa, chain - ## HITS:1 COG:PA2973 KEGG:ns NR:ns ## COG: PA2973 COG0616 # Protein_GI_number: 15598169 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Pseudomonas aeruginosa # 41 356 9 314 326 284 48.0 2e-76 MKSYYLDSFYQINVYNDIISIDLDWNFMSDWPPKPQNEPITPKQNGPEWQILEKAVLASV EEQRRSRRWGIFFKTLTFIYLLFIIVLMGKGCSTTKDGSTASSSSAHLAVVDIIGTIDAS SNQAVNSEDTNKALKRAFEASNSKAIALNINSPGGSPVQSDEIWQEIRYLKKEHPDKKVY AVIGDMGASGAYYIASAADEIIVNPSSLVGSIGVIMPNYGITGLAQKLGIEDRTLTAGTN KDILSMTKPINPVQRQHIQSVLDNVHTHFINAVKEGRGKRLKTNDPAIFSGLFWTGEQAI QLGVADRSGNITSLMRELKLDNKVDYTIERNPLQSILGRMGSEMGKGLSESVAERLQTSQ DAKLQ >gi|333032475|gb|GL891951.1| GENE 110 92730 - 93689 838 319 aa, chain + ## HITS:1 COG:XF1348 KEGG:ns NR:ns ## COG: XF1348 COG1560 # Protein_GI_number: 15837949 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lauroyl/myristoyl acyltransferase # Organism: Xylella fastidiosa 9a5c # 3 280 11 289 316 144 27.0 2e-34 MNYQLLKTFSRQPIQFGRFLARLLAGLVNTLKITRTSKSIELNLRIALPYLTPQQRIAIT EKAVRNELTSYFEFLSIWGSSNSKNISRIHRIEGEHFFHEALAAKKGVVLIVPHFGTWEV MNAWCAQFTSMTILYKPVKNADADRFVREARSREQANLVPTDESGVRQIFKALKQGETTV ILPDHTPNVGGDMVNYFGVPLASSNLSAKLIQKTKAKALFLYAIRNENDGFTMHIEPMDE KIYEGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPALDNIYNIDPTEALKIVDRL KAEALKTSTQPEPIQTSVM >gi|333032475|gb|GL891951.1| GENE 111 93642 - 96074 1380 810 aa, chain - ## HITS:1 COG:BS_comEC_2 KEGG:ns NR:ns ## COG: BS_comEC_2 COG2333 # Protein_GI_number: 16079611 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus subtilis # 532 791 10 287 307 146 32.0 2e-34 MFKIILLGWIGGIALMGIDFPLIMQYEKVGEALLLLAFIFYLYKRPMFVDRPFLKAVFCL LCTTSLFMVGYHYAEKALIERLEQRETDTRNLDIIVYINRLSEEKDNKVQQTAQVLNFSK EPVNWLLYLKSNNQNLLKNNQNLELGHYYRISGKTRPAHSYATPGAFDQEKWFIQRNIMS GFNVRYIEPLSLDEIYRLGYQQHLKEQQSFSNSFRLNIEKLRLTFRQILNSSSLQQKGLI LALLTGDESLLSDETQLQFKQLGISHLLAISGPHVLIFAIMLSWACHQFISRYYPQIYLW KPKQVLMAVPCCLGVLIYTAFVGFEIPALRTLLSAFIFIGFLLLKQPIKPFTLLVYSASL LLLIDPFSVLSAGFWLSYGACFILLRIYQTIAQLPEQQFLSLSSKMIFMGKVLIESQGKI FIALSPLTLLFFQQISWVAPLTNIIAVPIVGGVIVPLNIMAACAWFIVKPFGNMLFHFND MLLSILLSCLGLLEKLSLPLQGISLTPLSLLAISFAIIILFLPKGILPKTWGILCCLPLV IMNKTSQQIQLNILDVGQGQAIFLQHSEQNWLIDTGGSYDEKIFSIGQNVVVPFLRQQGV RQLDHVVLSHLDQDHSGAFPLIQQEIPVKQLISNEQLPNDLKQPFQYCHQGQQWHYPELD IQILWPKEKDLAFVASNQNQYSCVVYLQFKKVGGYQNFLIMGDAGWEAEYELLKDYPNLK IDVLVLGHHGSKHSSAYDFLATLKPKLAIASAGFDNRYGHPSQQVIARLKALHIPLKSTV EQGTLSFVLENHKIVLHDRRLDRLWLSRGF >gi|333032475|gb|GL891951.1| GENE 112 96160 - 96846 194 228 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 1 205 7 201 318 79 27 9e-14 MSKVVLEAKDIYKHFDDGKSKVEVIKGLSLQVEAGQFVSIVGASGSGKSTLLHVLGGLDQ PTKGQVFLNGQHFDNLGEAERGFQRNQFLGFVYQFHHLLPEFTALENVAMPLMLRADSQY KSVKAQAEYLLDRVGLSHRMDHKPGELSGGERQRVALARALVTKPAVVLADEPTGNLDRK TAVGIFELLTDLKKELNMAMLIVTHDEQLAQAADSILHMEDGLWVNGS >gi|333032475|gb|GL891951.1| GENE 113 96839 - 98095 1250 418 aa, chain - ## HITS:1 COG:PA2988 KEGG:ns NR:ns ## COG: PA2988 COG4591 # Protein_GI_number: 15598184 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: ABC-type transport system, involved in lipoprotein release, permease component # Organism: Pseudomonas aeruginosa # 8 418 1 416 416 447 59.0 1e-125 MTLDLEGMFKPISLYIGLRYTRARRSNHFISFIALVSMVGLTLGVAVLITVLSVMNGFDR ELKNRVLGMVPQATVSSTQILTDWPELVKRVENHPHVTGVAPFTQLQGMLTAQGQVAGIM VTGIDPKYEKNVSIIQNHIVAGSLDSLKKGEFGIVLGKDMADSLGLRLNDSVTLVLPEAT PSPAGVVPRFKRFKVVGIFSVGAEVDSMVGYIALYDASTLLRLPDGAQGVRLKLDDIFAA PQVADDIVKNLPSNFYATNWTYTHGNLFNAIQMEKTLVGLLLVLIIVVAAFNIVSSLVMV VTDKKSDIAILRTLGASPSMITKIFMVQGTVIGVIGTVAGTVLGVILALTISDIISWFNN VLGLNLFDAYFVHYLPSYLRWQDVTIIVIVSLLLSFLATIYPALRAAKVQPAEALRYE >gi|333032475|gb|GL891951.1| GENE 114 98322 - 99230 558 302 aa, chain - ## HITS:1 COG:PA4783 KEGG:ns NR:ns ## COG: PA4783 COG0697 # Protein_GI_number: 15599977 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pseudomonas aeruginosa # 7 281 10 286 296 78 27.0 2e-14 MPSQTNLASTYVLLVFIWATTPLAIVWSVSDLHVMWALLLRFYIALPLSVIVLLVLKTSF PTHKQALHSYFAGSFSLIGSQIFTYAATQYLSSGMIALMFGLAPIMAGLIGRFAFGQHLF KLQWLGMAVAVCGLAIICLNGSNQHVHPFGIVLMLVSVFVYSFSIFWVKKVNAKIQPMAQ ATGSILVSSILASCLIPFIWQYAPTHLPQAKSLFALIYTVLMASLVAMFCYFKLVQNIKP TTLSLTTVITPMLAMIIGAVLNHEQLSIMVFVGAFIILFGLFLYFYKDIQANRNFAQHIK SK >gi|333032475|gb|GL891951.1| GENE 115 99241 - 99708 570 155 aa, chain - ## HITS:1 COG:YPO3033 KEGG:ns NR:ns ## COG: YPO3033 COG1671 # Protein_GI_number: 16123210 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 5 155 2 151 152 161 53.0 4e-40 MLPFKLWVDADALPKILREVILRASDRYQLEVIFVANQNVGITPSVRIKSLQVLSGADQA DQEIVNRMSENDIVITQDIPLAAQVIEKGGIAIHPRGEVYTTANVKARLHLRDFMDTLRG AGVQTGGPPPISERDKREFSSALDQTILKQKRKTA >gi|333032475|gb|GL891951.1| GENE 116 99983 - 100924 911 313 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02859 NR:ns ## KEGG: ACICU_02859 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 313 1 313 313 622 100.0 1e-177 MKNQNSPEVITVNDQNFGSHGEHWNLLTSHPETDVPKWLGLALDAPVMPMGLCQNEDEMD QSFWLIQGPQGQKVTINQIIAVENQKPRALKTAFPSFDSPYQYNAQIERIITCDSATQAV LSLKLNKSTTIYAFDNLFSVNRCQYDKTQTYQVQFNAWAYELESVPAGETIVVDDPASIK HHRALNAILTEHNGIAPENLQELINEWQPKTKEDQEPVTVDFSKMVAYLYGENLGQEDEA WFQGNIVGKTSMSFMGAEYTLYDVTLVLEDNLPAILVRIATKNDLYKNFNIGEYIRGNIW IQANIYAKNSETN >gi|333032475|gb|GL891951.1| GENE 117 100958 - 101104 73 48 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000865 NR:ns ## KEGG: ABBFA_000865 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 48 1 48 48 79 97.0 4e-14 MKIIPEQTTSLIQTSNPRIRVDTGAFCFFVLGMFLAAIMIHQFGFMPF >gi|333032475|gb|GL891951.1| GENE 118 101162 - 102241 1236 359 aa, chain - ## HITS:1 COG:PA3167 KEGG:ns NR:ns ## COG: PA3167 COG1932 # Protein_GI_number: 15598363 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Pseudomonas aeruginosa # 2 359 4 361 361 471 65.0 1e-133 MRAYNFCAGPAALPTAVLEKAQQELLDWQGKGLSIMEMSHRSADYVAVAEKAEADLRKLM NIPENYKVLFLQGGASLQFSAIPLNLLGKNNKADYIHTGIWSEKALKEAKRYGDINVVEA GIKVDGKFAISEQSEWNLSDDAAYVHYADNETIGGLQFAGVPDVKAPLVCDFSSSILSAP LDVSKFGLIYAGAQKNIGPAGLTIVIIRDDLLDQAKAEIPSILKYADQAKNGSMVNTPST YAWYLSGLVFEWLLEQGGVDAIHKVNLEKAQLLYGYIDSSDFYNNPIAIPNRSIMNVPFT LADEALEKQFLKEAEENHLLNLAGHRSVGGMRASIYNAVPLEGVQALIRFMDDFAKRNG >gi|333032475|gb|GL891951.1| GENE 119 102621 - 104108 1342 495 aa, chain + ## HITS:1 COG:VC1606 KEGG:ns NR:ns ## COG: VC1606 COG1538 # Protein_GI_number: 15641614 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Outer membrane protein # Organism: Vibrio cholerae # 153 485 120 459 476 133 29.0 7e-31 MPTHQYRQSKRPFLFKPNYLALVLGVLIATPIYAQSLSYAEAEQQALKSSYSTQANQALQ QASQLEAEAVKGLGLPRVDLNVRAYAFHSETDVPLGSFKQKLENDLSQGLNDKLSQWNNV IPSDVLGQVQEGSNQIIHDGINRFPDYANLTVEDQVVRPSISVVMPLYTGGLTTSAKKIA NIQAQRSELSSQQQQDIQRFEVVQSYFNVQLQQQLVASSLFNFNAMQKHYSNALKLEQQG FISKGQRMQFEVARNNAERTLQNAQANLNASQFNLNNLLHQQNNADLSTPLFVNTVRSQS LESLLSSYSQKSSLVQKMQLDTQLANANIQAQQAAKKPSLFAFGEYSLDENENWIVGVMA KYNLFSGVDKNKNIHAAELKRYASELMTERTKQEIEALLNKSYNELNSAQQSHTLLQRNI SAAQENLRIQELSFREGMGTATQVIDAQNALSALKTEMALNAYKYVMSLATLLQSHGSMD QFKAYVTQPHTDYIR >gi|333032475|gb|GL891951.1| GENE 120 104121 - 105242 1302 373 aa, chain + ## HITS:1 COG:jhp1381 KEGG:ns NR:ns ## COG: jhp1381 COG0845 # Protein_GI_number: 15612446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Helicobacter pylori J99 # 69 370 27 328 329 204 40.0 3e-52 MNQDSAHSEQNSPVAGTAETHQNQQNTQTDNTQEVKTSKSDSQPPKNSKIKLIIAVVVIA LLGLIIFGLWKSYQPKPIELQGRVEAETVHVSTKVPSRIEEIYVQEGQKISKGQPLVRLV SPEIEAKKQQALATLQSALAFQSTVDRGSQQENIDTLYANWQSMKAQANLAKTTYQRGEN LYRQGVISRQRRDEMLAAQTSAQELSEAAYQQYARAKRGSTSQQKSTADAQVEIAKAAVS EAQALEAETRLLAPISGTVSKTYGKPSELVAMGVPVVSILEDDDLWVSLNVGENQYASVY KNKTLEGFIPALNQSVMFKVKNIDAEGEFATIKTTRQTGGYDIRSFKLHLVPERPVKDLK VGMSVLFKIKEEK >gi|333032475|gb|GL891951.1| GENE 121 105351 - 106376 692 341 aa, chain + ## HITS:1 COG:VC1608 KEGG:ns NR:ns ## COG: VC1608 COG0842 # Protein_GI_number: 15641616 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Vibrio cholerae # 1 320 41 364 387 98 22.0 2e-20 MFYAGKAEHLPIAIIDQDQSELSRNIGKYLSLNHTVDVKTITTSSSEAERLLNETKIWGY IFIPDGAEKRFVKAQDAQISIAFNQSFFSVGNTISSAMLVSTLNALADYAGQNYLANNIP YLDVPTAHVKISTLYNPSMSYEFYLEPFMVPAVLHLLLCCCVAFAIGQEIKRGTLTQWVN RESFIQGLLSKNLLYSFIFCFWTWLWMFWLVEIRGWFVAGSLSFLLAAQFLLYFSYALIS STVILATKNLSKTFGFIAVYGGSSLSFAGVTLPLNNAPIFTKFWSLIIPYTPYAKLQTEQ WVIGSPLFISMSPFLILIGYCLIYFFLSCLLLKKLVQGATS >gi|333032475|gb|GL891951.1| GENE 122 106373 - 107464 924 363 aa, chain + ## HITS:1 COG:HP1486 KEGG:ns NR:ns ## COG: HP1486 COG0842 # Protein_GI_number: 15646095 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Helicobacter pylori 26695 # 4 358 3 371 376 122 25.0 1e-27 MKEFLKAYVQTFKDIVSNSSVFTTLILSVILYSFFYPTAYKAERAESIPIVIVDEEQSLL TSQVIGQTANSPHVKIVDVTANFLEAEQMVREQKADGILLLPSNLTKSLRRGETGGIGLY LSTTNFLKTKEIGLGLATSIEATLKEYIERFGQRTHFQPALSIHQMPLFNTLSGYGSYIF PAVASLIIHQTIVLGLAMLVASYREQHEKITPIRFAGIFASIFTIGCLGSFYLFGFTLWF NDYPHGGNFVGLLVAVPIFISCVIGLGMLIGSLLDMPERAGHIIVFSSVPLFLLTGAAWP HQAMPEWLQWFAWCLPSTHGVQMFVQLNQMGVPLNVVVPKLIFLATIGVIFLITAYSRLK VFK >gi|333032475|gb|GL891951.1| GENE 123 107729 - 108523 562 264 aa, chain + ## HITS:1 COG:mll3087 KEGG:ns NR:ns ## COG: mll3087 COG3394 # Protein_GI_number: 13472706 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mesorhizobium loti # 8 257 9 267 272 103 28.0 3e-22 MAKVCYCADDFAMNAEISDAIIQLIEQGALQATSCMTQSDLWETAAAKLKPFSDRVDIGL HLNLTHTFASGNLVFPLPMLIVRAWSASLNRELITQCIEEQWDLFVSVLGKQPDFIDGHQ HIHQFPFIRDILLQLLKEKKFTGWIRNLQQPINPPHYRFKTRMLSALGSNSLAKACQTYH FNQNGQFAGIYDFKLTNYGQLNQYWLANAKDHLLIMCHPALAQSKDQDPIQHARIQEYQY FSSDQFQLDCQQYGIQLTRLGAMQ >gi|333032475|gb|GL891951.1| GENE 124 108520 - 109500 859 326 aa, chain + ## HITS:1 COG:sll0501 KEGG:ns NR:ns ## COG: sll0501 COG0463 # Protein_GI_number: 16332035 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Synechocystis # 7 304 5 304 318 278 44.0 9e-75 MNIKPFLSCVVPAYNEAENLKTFIPALANSLKQQNLSYEIIVVDDGSKDDTIPILQTMIE DYPLVVLELSRNFGKEAALSAGLDHVTGEVALLIDADFQHPFEAIPTMINLWKNGYDMVY GIRNRTTESWLKRVLTQAYYRILNLSSPIDIPESAGDFRLLDARVVEAIKQLPEKNRYMK GLYAWVGFKSIGINFSEQERQHGRSSFNLKSLFNLAMSGLTGFSDLPLRVCIYLGAILAL GAMSYGVWIIIKTLIEGISIPGWATLAAGMTLLGGIQLLFIGILGEYIGRIYAEVKNRPK YIISTEHSRTKQEHSITHQENTFSSF >gi|333032475|gb|GL891951.1| GENE 125 109500 - 109880 183 126 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000856 NR:ns ## KEGG: ABBFA_000856 # Name: not_defined # Def: GtrA-like family protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 126 1 126 126 160 98.0 1e-38 MFTHILQLARFTTTGTAAALTHYSVAMLLFKKHVALQYANLLAFLLAYWVSYFGHRVFTF KAQHLTHRQTLPKFTLVAGLGFLFNESFLLLSNLYFNVPVSTLVCTAIVLTSMVTFLLNR FFAFQH >gi|333032475|gb|GL891951.1| GENE 126 109890 - 111536 876 548 aa, chain + ## HITS:1 COG:RSc1324 KEGG:ns NR:ns ## COG: RSc1324 COG1807 # Protein_GI_number: 17546043 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family # Organism: Ralstonia solanacearum # 26 374 37 388 556 158 30.0 2e-38 MQQWLRSSKFLLIFLPIWLFVLSWIRPLSVPDEGRYGDISRTMFESGDWLTPRIDGLPFM HKPPLLHWLSSMFMELFGVHVWVLRLVPVLAGTLMLVGLFLFVKKHISESVAQLTVIILA TNLLFFGSSQYINHDLLLASWITISVLCFVDFTISAQKSILFLGYIAGAAAFLSKGLIGI LIPGMILLPWLIYTKQWKKIPSLLNPLAILLFLLIVSPWLYLVQSKYPQFLHYFFIDQQF NRFSSKEFNNKQPWCFYLIILFVSFLPWLFASRFTSIKTIFKDYKSCSLLALFVWWFVSV TVFFSIPPSKLAGYILPAVPPLAIFFALVMNKVLESSNKTRLQTWGIPVFTILVGIGVSA TPHFIRAHQPFFQNQAIFIYLIGALLIVLPLVLVGLYKKQKLKYLTYIFISLIVLCSAVP FAVRILDTKNNVGQTDFAEYIAPSTKIVFYNYYFYDVPFLLKLKQPVYIVNQWDTVHSDS ASLEIKDGLLFEPQLKKYLWSEQQLQDALMQKQDLIVISQPHNFATKDPSVKTLHYRNYD VFIFHPSK >gi|333032475|gb|GL891951.1| GENE 127 111588 - 114302 3402 904 aa, chain - ## HITS:1 COG:PA3168 KEGG:ns NR:ns ## COG: PA3168 COG0188 # Protein_GI_number: 15598364 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Pseudomonas aeruginosa # 5 903 7 917 923 1026 58.0 0 MSVSEIRPIAIEDELKHSYLDYAMSVIVSRALPDVRDGLKPVHRRVLYAMHELGNDYNKA YKKSARVVGDVIGKYHPHGDLAVYETIVRMAQDFSLRYLLVDGQGNFGSIDGDSAAAMRY TEVRMTKLAHELLADLEKDTVDWEDNYDGSERIPEVLPTRVPNLLINGAAGIAVGMATNM APHNMTEVVNACLAYADNPNISIEGLMEYITGPDFPTGGIIYGKSGIVDAYRTGKGRLHI RGKYHFEEDEKTGRTTIVFTEIPYQVNKARVIERIAELVKEKKLEGISELRDESDKEGMR IAIDLKRGENAEVVVNNLFLNTQLENSFSINMVCLDNGQPKLMNLKDIIAAFIRHRQEVV TRRTMFELRKARERGHILEGLTVALANIDEIIETIKTSANPAEARERLLAGEWAGGGVVA LLEKAGAISVRPDEIEGEDPNRPFGLSDSIYRLSPTQVGAILELRLHRLTGLEQDKLHAE YTEILGQIAELTAILNDFNLLMGVIREELAQVLQQYGDARRTEIVESRVDFCREDLIPEE QVVLTVSQTGYAKTQPLSDYQAQRRGGRGKSATSMKDDDFIQHLIVASNHATVLCFTNVG KVYRLKVFEVPQASRGAKGRPIVNLLPLDATETVTAILPLTEFPENHYVFMATASGTVKR VELEQFANIRSNGLRAIELNEEDTLIGVAITDGNQQIMLFSNEGKAIRFAETDVRAMGRT AKGVRGMRVSFASSTLSEEDADVENDDSDDNDDSADSSLVSRIVSLVVVPETGEVLCASA NGYGKRTPVNDFPTKKRGGKGVIAIKTSERNGELVGAVSIDETKELLLISDGGTLVRTRA AEVAMTGRNAQGVRLIRLSEEETLVGVVSIEAVEDEEELLEGEVDTTETDSEEAVSNNED TSEE >gi|333032475|gb|GL891951.1| GENE 128 114668 - 115600 1364 310 aa, chain - ## HITS:1 COG:PA2951 KEGG:ns NR:ns ## COG: PA2951 COG2025 # Protein_GI_number: 15598147 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Pseudomonas aeruginosa # 1 306 1 305 309 326 74.0 3e-89 MSILVIADHNNQTLNGATLNVVAAAQKIGGDITVLVAGSGAQAVADAAAKVAGVSKVLLA DNAAYANQLAENVAGLVADLAKGYKYVLAASTTTGKNILPRVAALLDVSMITDIISVESA NTFKRPIYAGNAIATVQSDEAIIVGTVRGTAFDPVAAEGGSAAVETVGEVKDAGVSKFVS EEIVKLDRPELTAARIVVSGGRGVGSGENYHKVLDPLADKLGAAQGASRAAVDAGFVPND FQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPINSVADYWLVGDLN AVVPELVSKL >gi|333032475|gb|GL891951.1| GENE 129 115618 - 116367 970 249 aa, chain - ## HITS:1 COG:PA2952 KEGG:ns NR:ns ## COG: PA2952 COG2086 # Protein_GI_number: 15598148 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Pseudomonas aeruginosa # 1 249 1 249 249 312 74.0 5e-85 MKALVAVKRVVDANVKVRVKPDNSGVDLTNVKMSINPFCEIAVEEAVRLKEKGTVSEIVV VSIGPKEAQEQIRSAMALGADRGILVETTDEIGALEVAKILKGVVDAEKPELILLGKQAI DDDSNQVGQMLGALLGAGQGTFASEVKVDGGKVQVTREIDGGLQTVELALPAIITTDLRL NEPRYAALPNIMKARKKPLDTKSPADYGVTAGTKLKTIKVEAPAERKAGVQVKSVDELVE KLKNEAKVI >gi|333032475|gb|GL891951.1| GENE 130 116803 - 117729 920 308 aa, chain - ## HITS:1 COG:HI0676 KEGG:ns NR:ns ## COG: HI0676 COG4973 # Protein_GI_number: 16272618 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerC # Organism: Haemophilus influenzae # 15 307 9 293 295 214 42.0 2e-55 MESNLDFALQLLSMWLKERKIQNQSEHTITAYERDVKSFLEFCELKKVDLRNVEASDLRE YLAQRVEQDQLSSSSMQRHLTSIRQFMKWAEQGKYLEINPTDDFKLKRQPRPLPGMIDIE TVNQILDQPMPEKPVDQQLWLRDKAMLELLYSSGLRLAELQGLTIKDIDFNRQLVRITGK GNKTRIVPFGKKAKESLLNWLKIYNIWKGHFDQNASVFISQRGGALTPRQIEKRVKLQAQ RAGVNVDLHPHLLRHCFASHMLSSSGDLRSVQEMLGHSNLSTTQIYTHIDFDHLAQVYDQ AHPRATKH >gi|333032475|gb|GL891951.1| GENE 131 117853 - 118476 508 207 aa, chain + ## HITS:1 COG:CC0456 KEGG:ns NR:ns ## COG: CC0456 COG1280 # Protein_GI_number: 16124711 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Caulobacter vibrioides # 5 207 7 208 208 178 50.0 5e-45 MTTILIPYLIAITLLTLTPGLDTTLIIRTATLEGKSKAFQAALGISLGCIAWGIVVACGL GALLMASDLAFNILKWMGAAYLAWLGLNMILKPRSQLADIQDNHSNRSTSENWFIKGFFG NLLNPKVGIFYISFLPQFIPAQASAVTWVMGLVMIHVVIGVLWSSLLILAMQPLSRYLKQ PKFVKYMDRITGSIFVLFALKLALSKR >gi|333032475|gb|GL891951.1| GENE 132 118563 - 119408 966 281 aa, chain - ## HITS:1 COG:VC0126 KEGG:ns NR:ns ## COG: VC0126 COG0253 # Protein_GI_number: 15640157 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Vibrio cholerae # 1 274 15 288 290 324 57.0 1e-88 MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADF KYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNM GYPKFLPNEIPFVAEEPKALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGP QVESHKRFPERVNAGFMQVIDDKHVRLRVFERGVGETLACGTGACAAAVSGMRRGLLANS VEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQG >gi|333032475|gb|GL891951.1| GENE 133 119414 - 120664 1451 416 aa, chain - ## HITS:1 COG:VC0125 KEGG:ns NR:ns ## COG: VC0125 COG0019 # Protein_GI_number: 15640156 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Vibrio cholerae # 7 415 9 417 417 533 62.0 1e-151 MSFTRINGVLHAEQCSLEQLAQQFGTPLYVYSKAAFEKHYLDMDRAFDFIDHQICFAVKS NSNIAVLNVLAKLGAGFDIVSGGELARVLKAGGDASKIVFSGLGKTEADIETSLNVGIAC FNVESYAELDRIQKVAARLGKKAPISLRVNPDVDAKTHPYISTGLKENKFGIPSDAVYET YQYAASLPNLEIVGIDCHIGSQLTETKPFVDALDRVIVMIDELKKLGINLKHIDIGGGLG VCYKDETPPSVEEYANSMKPALEKLGLKVYMEPGRSISANAGVLLTKVDLLKPTTHRNFA IIDAAMNDLIRPALYEAWMDIQPVVPRTDTEEKTWDLVGAICETGDFIGKDRSLALQEND LLTVLGAGAYGFVMSSNYNTRGRAAEVMVSGEKSYLIRERETVESLWEKERLLPEE >gi|333032475|gb|GL891951.1| GENE 134 120687 - 120911 120 74 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0859 NR:ns ## KEGG: ABAYE0859 # Name: not_defined # Def: lipoprotein (LppL) # Organism: A.baumannii_AYE # Pathway: not_defined # 1 74 8 81 81 92 100.0 4e-18 MRRVICLISLLSSSILLSACGQSGALQLPSDPNYDKRAKYLLYRNKEQKQVVQQDEQAEQ SVESSAAQPQTTSP >gi|333032475|gb|GL891951.1| GENE 135 121052 - 122530 1307 492 aa, chain - ## HITS:1 COG:ECs5186 KEGG:ns NR:ns ## COG: ECs5186 COG1113 # Protein_GI_number: 15834440 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Escherichia coli O157:H7 # 33 489 14 464 470 523 61.0 1e-148 MVRYRLFDLILANGLKKLLECIHKMSNQNLSDPHEQGELHRSLSNRHLQLIAIGGAIGTG LFMGSGKTISLAGPSILFIYMIIGLMVFFVMRALGELLLSNLTYKSFIDFSTDLIGPWAG YFVGWTYWLCWITIGIADLSAIIYYLQFFNNGLPFSPVEGAMISVAAIVFIMGLNLLTVR LFGELEFWFALIKILAIIILIAVGLWMIFTGFTSTTGEVASFTHLWANGGFFPTGVHGFL AGFQIAIFAFVGVELVGTTAAETKDPERNLPKAINSIPIRIIIFYVLALLIVMSVTPWNR IDPAISPFVNLFSQAGVAAAAILMNLVVLSSVMSSMNSGVFSTSRMLFGLSREDQGPKAF GKLNRRAVPANALYFSAACLLLGAALQYFVPNTVEAFTLATTLSTILFICVWLLIIWSYI RYYTTRPELHAKSTFKLPGGLFTCWITIIFFIGMIYVLSLEPDTFKALKVSPIWFVILII GYFFFYKPRHKK >gi|333032475|gb|GL891951.1| GENE 136 122948 - 124336 1708 462 aa, chain + ## HITS:1 COG:PA4609 KEGG:ns NR:ns ## COG: PA4609 COG1066 # Protein_GI_number: 15599805 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Pseudomonas aeruginosa # 1 451 1 448 453 584 67.0 1e-166 MSKVKTVYRCEQCGADHLKWAGQCSECGEWNCLNEVKLEPTTAHRARPKVGGYAGQVANI TTLNKVSVSHETRLPTGISEFDRVLGGGLVTGSVVLIGGDPGIGKSTILLQTATHMASAK SSALYITGEESLSQVALRAQRLDLPTDQLKVMAETCVERICEVLEQERPVVAILDSIQTL YTETLQSAPGGVSQIRESAALLTRYAKNSGTALFIVGHVTKEGALAGPRVLEHMVDCVLY FEGQSDSRYRMIRAVKNRFGAVNELGVFGMTDKGLREVANPSAIFLSRYDEAIPGSIVMI SREGTRPLLVEVQALVDDAQGQPRRVALGLEQNRLNMLLAVMHRHGGVQTTGQDVYVNIV GGLKITETGSDLAVLLACASSLRTKALPQQLAVFGEVGLSGEIRPVPNGQERLKEAAKHG FKYVILPRGNAPQKAIPGVQVIAVARLHEALTEAMQLSDELT >gi|333032475|gb|GL891951.1| GENE 137 124419 - 125396 1201 325 aa, chain + ## HITS:1 COG:RSc0459 KEGG:ns NR:ns ## COG: RSc0459 COG4395 # Protein_GI_number: 17545178 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Ralstonia solanacearum # 204 324 233 354 356 71 31.0 2e-12 MEVHQRGLITGILMAALAISPLAEAKRAGGGKSHGMARSTTSSQSYQQPRQVTPVQQPAT APQRSGPGVGSMVAAGVAGAAVGAVAANALADDKSTSAEHQVTQPGNEQAVQAQEEKKGG IPGWLWVLLAAAVAFFVFRKLGSKKKLAANNPYAPNNGGQNPFGRSAAPTNTGDNTNIFG QSVGGGAATQAPFGSATTNSGNQLPDGSEPASFLRVARQRFNHIQSINSASNIEEIRRYL TPELYNSMYNDIMENQDQDVAEFSNLNAMVVDSATENGQYIVSVRFTGTVSEDLNSLPQP FTEIWHFVKPVGSQQDWVVAGIQQA >gi|333032475|gb|GL891951.1| GENE 138 125455 - 126429 1027 324 aa, chain - ## HITS:1 COG:YPO0362 KEGG:ns NR:ns ## COG: YPO0362 COG2269 # Protein_GI_number: 16120697 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Truncated, possibly inactive, lysyl-tRNA synthetase (class II) # Organism: Yersinia pestis # 4 324 6 325 325 279 48.0 4e-75 MSLSYQPTCSIDALKARAKLYTQIRQFFAEREVMEVETPIVSQAGVTDVHLASVQALRHI NGKLQTQYLQTSPEFAMKRLLASGSGPIYQICKVFRDDEHGRKHNSEFTMLEWYRPGLDL KALMHETADLLQTCLQHRFGEVRPFILSYKHAFQDRLDINPLQATLKQLKDTANRVGLNL DLGDDRLAYMDLLFSHFVEPSLGFDAPVFLTDFPPEMASLAKVKLDEDGEEVAARFEVYI EGLELANAYDELLDSDVLRSRFEADNAERAKQGLHIMPLDEHLLAALSHMPECSGIALGI DRLLMVATDQLKIEKVIAFPAEIA >gi|333032475|gb|GL891951.1| GENE 139 126426 - 127493 1161 355 aa, chain - ## HITS:1 COG:VC2108 KEGG:ns NR:ns ## COG: VC2108 COG0111 # Protein_GI_number: 15642108 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Vibrio cholerae # 1 349 7 358 387 257 42.0 2e-68 MKIVADENLAFTDYFFSEFGDIQYKAGRTLTHTDVQDAEALLVRSVTAVNESLIQNTALK YVGSATIGTDHLDIQALEKQGITWANAAGCNAQAVAEYVITALLHLDASLLEQQEKFTLG IVGLGNVGKRLAYMAQLLGWKVIGFDPYVQLDSIENVSFQTLLQQANAVSIHVPLTKKGE HATYHLFDEKAFAALQPNTILINSARGPVVKEAALIEDIQRTQRKVVLDVFEHEPVISEE LLNMLALATPHIAGYSLEGKARGTQMIYEAFCQKFGYDINKRFETQLPACEDYFSGHDLK AVLKQKLSQIYDIAQDDANIRACVKEGKVEQKAFDLLRKNYPLRREWAAHGGPQA >gi|333032475|gb|GL891951.1| GENE 140 127598 - 127990 386 130 aa, chain - ## HITS:1 COG:CAC1011 KEGG:ns NR:ns ## COG: CAC1011 COG3339 # Protein_GI_number: 15894298 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 14 124 21 127 138 93 45.0 8e-20 MSWVQSIKEWAKRLKKQIIMLWFASRHPQMPWLPKIIAVVAVAYAFSPIDLIPDFIPILG FIDDAVILPILIWLAVRFTPQQVIFDAEQQAKEWLDEHEKRPKNYLVAVLIILIWLTLAV MAYFYFGGGL >gi|333032475|gb|GL891951.1| GENE 141 128110 - 128901 735 263 aa, chain - ## HITS:1 COG:RSp1050 KEGG:ns NR:ns ## COG: RSp1050 COG1526 # Protein_GI_number: 17549271 # Func_class: C Energy production and conversion # Function: Uncharacterized protein required for formate dehydrogenase activity # Organism: Ralstonia solanacearum # 1 255 4 267 273 216 46.0 3e-56 MTPHAYGVETLPVQRFNKTESENVLDHIVQEYPIALVYNGISHAVMMATPTDVDLFAKGF SLSEGILTSLKELYTLDVHQNELGITVEMTISSRAFAALKEHRRMMVGRTGCGLCGIESL EQFQLDVPKITTHASKIWLEQIPSAISHLKTQQEITALTGGAHAAAWVVDGQIVALFEDV GRHNALDKLLGYLAQENYDTSLGFVVMTSRASYELIRKCAQLNISLLASISAPTSMAIQL AKQSGLTLASFCRGDGFVLYTEI >gi|333032475|gb|GL891951.1| GENE 142 128980 - 131388 2358 802 aa, chain - ## HITS:1 COG:RSp1048 KEGG:ns NR:ns ## COG: RSp1048 COG0243 # Protein_GI_number: 17549269 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Ralstonia solanacearum # 18 780 5 765 779 928 59.0 0 MDNSEEQKHIQENNGFARIEPYTHPAGGWGALLSVARNLKRQDILGKGSITLLNINQPTG FDCPGCAWPEKKDAHAFNFCENGAKAVAFEATSKTVTPEYFAGHTVSWLSEQSDFFLEDL GRLTDPVRYDAATDKYVPISWDDAFKLIAQHLHALDHPDQAAFYTSGRASNEAAFLYQLF VRSFGTNNFPDCSNMCHETTSVGLLDSIGLGKGTVTLEDFDLADAIFSFGHNPGTNHPRM LGTLREVSKRGGNIIAINPIKERGLERFQDPQAPLEMMTNGSTPISRYYFQPKIGGDYAL MLGILKHLHEWDKKALASGKPSVFDRNFIAVNTVGFDEMIAEVERTEWADLYKHSGLSPE HLEKLAKLFLESERSIFCWGMGITQHRHGTANVHMLANLLLARGQIGRPGAGLCPVRGHS NVQGDRTMGINELPSPKLLDNIDRVFGIKSPRKNGYGVVETIKAMAEGDIKVFIGLGGNF AVATPDTAYTQEALRKCNLTVHVATKLNRSHLVCGKDALILPCLGRTEIDEQLHGPQAIT VEDSMSNVHLSAGRNTPISKNILSEPDIVARMAEAVLPESQIKWKWYIESYDRIRDSIAD VFDEFHDFNLRVYKPGGFHLEHPANQHIWNTKSGKAQFLITPLEEVYADKENQYAAAYTE SKVYTLMTTRSHDQYNTTLYGLDDRYRGVFGQRRVLFMNQADIDEAGFEANQWVDIESVF SDGVKRIVHSFRIVPYNIPRGSLAAYYPETNPLVALSSHDKYAKIPASKSVPVILHPGNA PEHFNLATAVDPEDANKKVSSL >gi|333032475|gb|GL891951.1| GENE 143 131783 - 132940 1112 385 aa, chain + ## HITS:1 COG:PA1052 KEGG:ns NR:ns ## COG: PA1052 COG1929 # Protein_GI_number: 15596249 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Pseudomonas aeruginosa # 1 379 1 378 381 325 55.0 7e-89 MKVVIAPDSFKDSLSALKVAQAIAQGWQAVFPHAETILCPMADGGEGTIEAVLEVCDGQW REKTVVGPLGQPVQAKWGWLEKQKIAMIEMAQASGIQLVPPSERDACHSTTFGTGQLILD ALDTGAKDIILTVGGSATNDGGTGLLSALGAVLLDANQNVLPAGGLALSHLSKIDLTHFD SRIQHTRFLLAADVTNPLCGPNGASHIFGPQKGASPAQVQLLDAALAHFADVTAQLLGFD KRDEAGSGAAGGLGFAAKSYLNADFKAGVKVVAELNQLEHKISNADWVITGEGKFDQQTL SGKTVFGISQIAKAHNVPVIVITGTLGEGYQALYEHGVSAAFSLANGPITLEHACEHAAE LIYERTVDIARLIQFSQTSLKDKKT >gi|333032475|gb|GL891951.1| GENE 144 132937 - 133503 483 188 aa, chain - ## HITS:1 COG:SMa1887 KEGG:ns NR:ns ## COG: SMa1887 COG1309 # Protein_GI_number: 16263491 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 1 185 1 188 200 126 39.0 2e-29 MKVSKTQVKENRDKIVEKATQLFRSKGYDGVGIAELMSSAGFTHGGFYKHFSSKTDLVTI TAKHGLEQVLKRIEGLNLPQFIQMYVSRTHRDNRDQGCTLTALSCDAARQPDEVKVEFEE GIEQLIEFIMNERAKQVSLETEELRKQAINILAQSVGAIALSRACPDQSNLSDEILESCR ESLLKLTD >gi|333032475|gb|GL891951.1| GENE 145 133626 - 134408 180 260 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163797523|ref|ZP_02191474.1| 50S ribosomal protein L9 [alpha proteobacterium BAL199] # 1 220 1 207 259 73 25 4e-12 MSVQSKVLITGASSGIGSVYADRFAQRGYHLILVARDTNRLDKISKDLQEKYGVQVEFIQ ADLSNDQDIRKIEDVLKNDADIEILVNNAGIALNGNFLTQDRNEIEKLLTLNMTAVVRLS HAMSQSLIRKGKGAIINLGSVLGLAPEFGSTIYGASKSFIQFFSQGLHLELKDHGVHVQA VLPSATKTEIWERSGIDLSQVPPLMDVNDLVDAALIGFDRKETITIPVLKDENQWNNFEK SRMTLLPNFSSAEVAQRYKN >gi|333032475|gb|GL891951.1| GENE 146 134446 - 135051 801 201 aa, chain + ## HITS:1 COG:PA5190 KEGG:ns NR:ns ## COG: PA5190 COG0778 # Protein_GI_number: 15600383 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Pseudomonas aeruginosa # 1 201 1 200 200 245 58.0 4e-65 MNVIDALRKRRAVKRFDPAFQLSEDDKKQLLQEVLANAPSAFNLQHWRPVIVEDAELRQK IRAIAWDQPQVTESSLLIVLCAKVNTWEVDAKRVWDGASPEVQDIMVGAIDQYYRDRPQT QRDEVMRSAGIFAQTLMLLAQEHGLDSCPMDGFDFDAMAKLINLPEDHVVCLMIAVGKSA SEPYPRVGKLPYDDVIIKNTF >gi|333032475|gb|GL891951.1| GENE 147 135167 - 135784 547 205 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02890 NR:ns ## KEGG: ACICU_02890 # Name: not_defined # Def: TetR/AcrR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 205 1 205 205 383 100.0 1e-105 MVTIRKPKQNRAINTFDSIVGAGFISVMKNGLDHTTVLKVCEIAGVGSGSFYEYFKNKEA LFVEMQQHFIAEISKVIYGVIPEILDLEIPEAIRTIFLKIGEFLAKDNNKYFYWLSVSSK YSTEASHVKAVKAINVLAIEYAMKHPEVLKIKNLKMMVYILIHSSIALTMNFFTSENMGF TFEELVDCLINITMSYIEDDRNKVA >gi|333032475|gb|GL891951.1| GENE 148 135893 - 136756 526 287 aa, chain + ## HITS:1 COG:PA1542 KEGG:ns NR:ns ## COG: PA1542 COG3687 # Protein_GI_number: 15596739 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 18 275 19 274 278 124 29.0 3e-28 MNTALKSDQKIFRRNVELTYDHHKSYSFYYEENPVVTSLFVVLSAMFPAGEMFFIESIRN VRNQIKDEKLLEDIKAFIAQEAFHSREHKTLNNHLIHSNYPEVVEIEAKTKARLDKLRQL SAVEQVTATVVMEHYTATLARLLLTDSLIKAKTTQESRNLWEWHALEELEHKSVAFDVLN AIGGNSSKNRKVALARVAKLITPIIFKYWIKILKRKDINFTLKQLKDGIYLGFGGINRVG ILSKAFVDMLDVRAENFDPLNMQTEQLEAEFREKLFGQAGFLRDYLS >gi|333032475|gb|GL891951.1| GENE 149 136922 - 137254 166 110 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02892 NR:ns ## KEGG: ACICU_02892 # Name: not_defined # Def: transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 102 61 162 192 199 100.0 4e-50 MVQKEKLQEQVVAMVEYDLSTPAIDKLKKLYDLHTDLEGPYYLLFKAVFEIKNSYPNAYQ TAVRYRTWLKNEIYSQLRVLNADTSFNDAKLFLYMVEGTIIQRGGGSFSF Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:44:11 2011 Seq name: gi|333032474|gb|GL891952.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld536, whole genome shotgun sequence Length of sequence - 85739 bp Number of predicted genes - 96, with homology - 94 Number of transcription units - 47, operones - 18 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 784 1073 ## ACICU_03239 hypothetical protein + Term 785 - 841 8.0 - Term 783 - 821 7.1 2 2 Tu 1 . - CDS 844 - 1437 479 ## COG0560 Phosphoserine phosphatase - Prom 1466 - 1525 8.0 - TRNA 1545 - 1621 83.6 # Arg ACG 0 0 + Prom 1423 - 1482 5.1 3 3 Tu 1 . + CDS 1629 - 1733 57 ## - TRNA 1661 - 1737 83.6 # Arg ACG 0 0 - TRNA 1748 - 1838 67.2 # Ser GCT 0 0 + Prom 1895 - 1954 5.1 4 4 Tu 1 . + CDS 2100 - 4517 977 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 + Term 4544 - 4580 6.6 + Prom 4544 - 4603 4.0 5 5 Op 1 . + CDS 4651 - 6705 2356 ## COG0339 Zn-dependent oligopeptidases 6 5 Op 2 . + CDS 6746 - 6955 204 ## ABSDF0459 hypothetical protein 7 5 Op 3 . + CDS 6967 - 7398 434 ## ACICU_03244 hypothetical protein + Term 7413 - 7478 12.4 - Term 7485 - 7528 7.4 8 6 Tu 1 . - CDS 7547 - 9742 2412 ## ACICU_03245 putative integral membrane protein, transporter - Prom 9764 - 9823 2.3 - Term 9862 - 9910 2.2 9 7 Op 1 . - CDS 9930 - 10496 319 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 10 7 Op 2 . - CDS 10574 - 11659 1284 ## ABBFA_000463 hypothetical protein - Prom 11805 - 11864 6.1 - Term 11815 - 11858 4.1 11 8 Tu 1 . - CDS 11892 - 11993 150 ## - Prom 12060 - 12119 2.0 - Term 12331 - 12368 -0.8 12 9 Op 1 . - CDS 12429 - 12806 123 ## ACICU_03248 hypothetical protein 13 9 Op 2 . - CDS 12825 - 13082 395 ## ABBFA_000461 hypothetical protein + Prom 13178 - 13237 4.5 14 10 Tu 1 . + CDS 13270 - 14442 1431 ## COG1960 Acyl-CoA dehydrogenases + Term 14452 - 14492 10.1 - Term 14446 - 14474 2.3 15 11 Tu 1 . - CDS 14491 - 15981 1580 ## COG2072 Predicted flavoprotein involved in K+ transport - Prom 16088 - 16147 6.8 - Term 16107 - 16152 8.9 16 12 Op 1 50/0.000 - CDS 16163 - 16540 626 ## PROTEIN SUPPORTED gi|169632376|ref|YP_001706112.1| 50S ribosomal protein L17 17 12 Op 2 26/0.000 - CDS 16559 - 17566 1299 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 18 12 Op 3 36/0.000 - CDS 17584 - 18210 1045 ## PROTEIN SUPPORTED gi|169632374|ref|YP_001706110.1| 30S ribosomal protein S4 19 12 Op 4 48/0.000 - CDS 18223 - 18609 658 ## PROTEIN SUPPORTED gi|50086192|ref|YP_047702.1| 30S ribosomal protein S11 20 12 Op 5 . - CDS 18629 - 18985 597 ## PROTEIN SUPPORTED gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 - Term 19009 - 19047 5.3 21 13 Op 1 . - CDS 19093 - 19209 197 ## PROTEIN SUPPORTED gi|50086194|ref|YP_047704.1| 50S ribosomal protein L36 22 13 Op 2 53/0.000 - CDS 19230 - 20588 1112 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 23 13 Op 3 48/0.000 - CDS 20595 - 21035 715 ## PROTEIN SUPPORTED gi|126643077|ref|YP_001086061.1| 50S ribosomal protein L15 24 13 Op 4 50/0.000 - CDS 21039 - 21215 298 ## PROTEIN SUPPORTED gi|126643078|ref|YP_001086062.1| 50S ribosomal protein L30 25 13 Op 5 56/0.000 - CDS 21222 - 21719 818 ## PROTEIN SUPPORTED gi|169632367|ref|YP_001706103.1| 30S ribosomal protein S5 26 13 Op 6 46/0.000 - CDS 21722 - 22072 571 ## PROTEIN SUPPORTED gi|169794610|ref|YP_001712403.1| 50S ribosomal protein L18 27 13 Op 7 55/0.000 - CDS 22087 - 22620 884 ## PROTEIN SUPPORTED gi|169794609|ref|YP_001712402.1| 50S ribosomal protein L6 28 13 Op 8 50/0.000 - CDS 22634 - 23029 634 ## PROTEIN SUPPORTED gi|169632364|ref|YP_001706100.1| 30S ribosomal protein S8 29 13 Op 9 50/0.000 - CDS 23041 - 23346 515 ## PROTEIN SUPPORTED gi|169794607|ref|YP_001712400.1| 30S ribosomal protein S14 30 13 Op 10 48/0.000 - CDS 23356 - 23892 901 ## PROTEIN SUPPORTED gi|169632362|ref|YP_001706098.1| 50S ribosomal protein L5 31 13 Op 11 57/0.000 - CDS 23908 - 24225 513 ## PROTEIN SUPPORTED gi|169632361|ref|YP_001706097.1| 50S ribosomal protein L24 32 13 Op 12 50/0.000 - CDS 24235 - 24636 658 ## PROTEIN SUPPORTED gi|226953881|ref|ZP_03824345.1| 50S ribosomal protein L14 33 13 Op 13 . - CDS 24696 - 24953 419 ## PROTEIN SUPPORTED gi|126643087|ref|YP_001086071.1| 30S ribosomal protein S17 34 13 Op 14 . - CDS 24950 - 25147 316 ## PROTEIN SUPPORTED gi|126643088|ref|YP_001086072.1| 50S ribosomal protein L29 35 13 Op 15 50/0.000 - CDS 25147 - 25560 697 ## PROTEIN SUPPORTED gi|169794601|ref|YP_001712394.1| 50S ribosomal protein L16 36 13 Op 16 61/0.000 - CDS 25564 - 26316 1272 ## PROTEIN SUPPORTED gi|169794600|ref|YP_001712393.1| 30S ribosomal protein S3 37 13 Op 17 59/0.000 - CDS 26318 - 26650 533 ## PROTEIN SUPPORTED gi|169632355|ref|YP_001706091.1| 50S ribosomal protein L22 38 13 Op 18 60/0.000 - CDS 26659 - 26934 478 ## PROTEIN SUPPORTED gi|169632354|ref|YP_001706090.1| 30S ribosomal protein S19 39 13 Op 19 61/0.000 - CDS 26948 - 27772 1455 ## PROTEIN SUPPORTED gi|169632353|ref|YP_001706089.1| 50S ribosomal protein L2 40 13 Op 20 61/0.000 - CDS 27784 - 28104 521 ## PROTEIN SUPPORTED gi|126643093|ref|YP_001086077.1| 50S ribosomal protein L23 41 13 Op 21 58/0.000 - CDS 28101 - 28703 991 ## PROTEIN SUPPORTED gi|126643094|ref|YP_001086078.1| 50S ribosomal protein L4 42 13 Op 22 40/0.000 - CDS 28715 - 29359 1087 ## PROTEIN SUPPORTED gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 - Term 29363 - 29404 3.1 43 13 Op 23 . - CDS 29411 - 29758 577 ## PROTEIN SUPPORTED gi|226953870|ref|ZP_03824334.1| 30S ribosomal protein S10 - Prom 29883 - 29942 5.1 - Term 29855 - 29883 -1.0 44 14 Tu 1 . - CDS 29974 - 30702 534 ## COG0518 GMP synthase - Glutamine amidotransferase domain - Prom 30850 - 30909 9.7 + Prom 30676 - 30735 3.6 45 15 Op 1 . + CDS 30870 - 32060 1002 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 46 15 Op 2 . + CDS 32104 - 33651 1781 ## COG0433 Predicted ATPase + Term 33678 - 33723 0.3 + Prom 33653 - 33712 7.4 47 16 Op 1 . + CDS 33797 - 34561 919 ## COG1017 Hemoglobin-like flavoprotein + Prom 34565 - 34624 2.4 48 16 Op 2 . + CDS 34647 - 35084 348 ## COG1959 Predicted transcriptional regulator + Prom 35105 - 35164 3.5 49 17 Tu 1 . + CDS 35193 - 35969 715 ## COG0218 Predicted GTPase + Prom 36004 - 36063 7.2 50 18 Tu 1 . + CDS 36096 - 37043 987 ## COG3687 Predicted metal-dependent hydrolase + Term 37046 - 37089 10.5 - Term 37034 - 37077 10.5 51 19 Tu 1 . - CDS 37086 - 38324 1190 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 38378 - 38437 6.3 - Term 38416 - 38449 3.1 52 20 Tu 1 . - CDS 38458 - 39330 1046 ## COG1946 Acyl-CoA thioesterase - Prom 39491 - 39550 6.5 + Prom 39500 - 39559 6.4 53 21 Tu 1 . + CDS 39606 - 42176 2658 ## COG2937 Glycerol-3-phosphate O-acyltransferase + Term 42192 - 42229 6.6 - Term 42180 - 42217 6.6 54 22 Op 1 . - CDS 42220 - 43206 686 ## ACICU_03292 putative RND type efflux pump 55 22 Op 2 . - CDS 43286 - 44101 709 ## COG0451 Nucleoside-diphosphate-sugar epimerases + Prom 44027 - 44086 5.0 56 23 Op 1 . + CDS 44122 - 46167 1890 ## COG1200 RecG-like helicase 57 23 Op 2 . + CDS 46160 - 46795 411 ## COG1040 Predicted amidophosphoribosyltransferases - Term 46604 - 46640 -0.9 58 24 Op 1 . - CDS 46798 - 47199 357 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 59 24 Op 2 . - CDS 47214 - 47795 689 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Prom 47856 - 47915 3.8 + Prom 47789 - 47848 5.0 60 25 Tu 1 . + CDS 47953 - 48966 1227 ## COG0598 Mg2+ and Co2+ transporters + Term 48994 - 49037 10.5 - Term 48989 - 49018 1.4 61 26 Op 1 . - CDS 49036 - 49323 244 ## ABBFA_000413 hypothetical protein 62 26 Op 2 13/0.000 - CDS 49335 - 49976 761 ## COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component 63 26 Op 3 16/0.000 - CDS 50003 - 50683 765 ## COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component 64 26 Op 4 23/0.000 - CDS 50683 - 51459 834 ## COG0767 ABC-type transport system involved in resistance to organic solvents, permease component 65 26 Op 5 . - CDS 51456 - 52286 184 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 52335 - 52394 4.0 66 27 Op 1 . - CDS 52401 - 52586 109 ## ACICU_03304 hypothetical protein - Prom 52612 - 52671 9.7 - Term 52610 - 52674 10.1 67 27 Op 2 1/0.182 - CDS 52678 - 54525 3095 ## COG0513 Superfamily II DNA and RNA helicases - Prom 54546 - 54605 2.8 - Term 54872 - 54917 9.0 68 28 Tu 1 . - CDS 54935 - 55765 1142 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family - Prom 55822 - 55881 6.4 - Term 55800 - 55854 13.1 69 29 Tu 1 . - CDS 55888 - 57792 2145 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 58013 - 58072 5.5 + Prom 58009 - 58068 4.3 70 30 Tu 1 . + CDS 58096 - 58698 666 ## COG0807 GTP cyclohydrolase II + Term 58728 - 58777 10.1 + Prom 58732 - 58791 6.6 71 31 Tu 1 . + CDS 58826 - 59776 1127 ## COG0408 Coproporphyrinogen III oxidase + Term 59788 - 59833 7.3 + Prom 59819 - 59878 4.1 72 32 Tu 1 . + CDS 59950 - 60738 874 ## COG0169 Shikimate 5-dehydrogenase + Term 60748 - 60781 3.1 - Term 60729 - 60774 10.9 73 33 Tu 1 . - CDS 60784 - 63087 2212 ## ACICU_03311 hypothetical protein - Prom 63129 - 63188 12.7 + Prom 63106 - 63165 7.9 74 34 Tu 1 . + CDS 63345 - 65168 2157 ## COG1960 Acyl-CoA dehydrogenases + Term 65188 - 65235 14.5 - Term 65168 - 65228 19.3 75 35 Tu 1 . - CDS 65241 - 65888 565 ## ABSDF0381 putative signal peptide - Prom 66022 - 66081 5.4 + Prom 65996 - 66055 3.5 76 36 Tu 1 . + CDS 66142 - 66396 357 ## COG1983 Putative stress-responsive transcriptional regulator + Term 66418 - 66460 6.1 77 37 Tu 1 . - CDS 66466 - 67566 1002 ## COG3448 CBS-domain-containing membrane protein - Prom 67601 - 67660 7.2 78 38 Op 1 . - CDS 67699 - 68496 669 ## ACICU_03316 hypothetical protein 79 38 Op 2 . - CDS 68499 - 69761 850 ## COG4277 Predicted DNA-binding protein with the Helix-hairpin-helix motif - Prom 69785 - 69844 4.2 80 39 Tu 1 . - CDS 69871 - 70287 370 ## ACICU_03318 hypothetical protein - Prom 70456 - 70515 6.8 81 40 Tu 1 . + CDS 70317 - 70739 150 ## ACICU_03319 hypothetical protein + Prom 70745 - 70804 7.1 82 41 Op 1 19/0.000 + CDS 70834 - 71811 1012 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 83 41 Op 2 . + CDS 71811 - 73880 3012 ## COG0751 Glycyl-tRNA synthetase, beta subunit + Term 73897 - 73935 6.4 - Term 73885 - 73923 6.4 84 42 Op 1 . - CDS 73933 - 74217 303 ## COG2350 Uncharacterized protein conserved in bacteria 85 42 Op 2 . - CDS 74253 - 75155 512 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 75224 - 75283 4.5 + Prom 75185 - 75244 4.5 86 43 Tu 1 . + CDS 75264 - 76130 718 ## COG0583 Transcriptional regulator + Prom 76171 - 76230 3.4 87 44 Op 1 . + CDS 76279 - 76698 451 ## ACICU_03325 hypothetical protein 88 44 Op 2 . + CDS 76793 - 77224 378 ## ABBFA_000385 hypothetical protein + Term 77427 - 77473 -0.5 - Term 77230 - 77272 6.1 89 45 Op 1 . - CDS 77323 - 78678 1278 ## COG1404 Subtilisin-like serine proteases 90 45 Op 2 . - CDS 78714 - 79022 270 ## ACICU_03328 hypothetical protein - Prom 79052 - 79111 3.0 + Prom 79412 - 79471 8.6 91 46 Tu 1 . + CDS 79615 - 80376 950 ## ABAYE0357 signal peptide + Term 80382 - 80443 18.0 - Term 80369 - 80429 17.8 92 47 Op 1 5/0.091 - CDS 80440 - 81414 999 ## COG2988 Succinylglutamate desuccinylase 93 47 Op 2 7/0.091 - CDS 81427 - 82770 1675 ## COG3724 Succinylarginine dihydrolase 94 47 Op 3 8/0.091 - CDS 82788 - 84257 1641 ## COG1012 NAD-dependent aldehyde dehydrogenases 95 47 Op 4 7/0.091 - CDS 84257 - 85288 1054 ## COG3138 Arginine/ornithine N-succinyltransferase beta subunit 96 47 Op 5 . - CDS 85307 - 85729 602 ## COG4992 Ornithine/acetylornithine aminotransferase Predicted protein(s) >gi|333032474|gb|GL891952.1| GENE 1 2 - 784 1073 260 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03239 NR:ns ## KEGG: ACICU_03239 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 260 548 807 807 273 100.0 6e-72 ISPVIDVVQGGIDILQGVESLKTEIINTGIDTVADTIIGILPQAEHPVSEIADLGTLTFE TSRDTVNGALEVVSDLVGGDIQGATESATGILDTLITNGTTATGLVTEIIGGVTGTIGGV TGGDSPLGLVTDLLGGLTGSVGGDSPLGVVTDLLGGLTGSVGGDSPLGVVTDLLGGLTGG VTGGTDNPIGIVTDIVGSLTGGVTGEGSLDVISNLLGGLTGGSLLGGVTSTVSSVTNTTH TIVPTSLLTDNFLENSFNTV >gi|333032474|gb|GL891952.1| GENE 2 844 - 1437 479 197 aa, chain - ## HITS:1 COG:PA5547 KEGG:ns NR:ns ## COG: PA5547 COG0560 # Protein_GI_number: 15600740 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Pseudomonas aeruginosa # 3 192 15 204 207 84 27.0 1e-16 MNLALFDFDGTITHNDTFSLFLKFSLSKKTQILGGIRLAPYIAGYKLGWVTDKTIRTKLC QVGYIGYDAASLICKGQEFAKKVIPSCIRENALKRILWHKQQGDQVVVVSASLSVYLESW CKSLDLDVICNQLEIDNGILTGYFIDGDCGYLEKVNRIKNKYDLTQYTIIYAYGDTPNDY AMLELAHRKYYKWQEIN >gi|333032474|gb|GL891952.1| GENE 3 1629 - 1733 57 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCFSAIHSILLGALREIRTPDPLVRSQVLYPAEL >gi|333032474|gb|GL891952.1| GENE 4 2100 - 4517 977 805 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 32 741 13 726 730 380 33 1e-104 MTKNWVDPEAKAEAERYDNPIPSRTLILDTLEQLQTPQSHAELVDHFHIQDQKSIEALSH RLSAMVRDGQLMKDGFKFQLVADQPTYEATVYINSKGLGTAHIDGQDDLLLPERELRLVF NGDRVRVRQTSVDRKGKPWGFITEVIQHRVKQLIGKLSVHEGEYFIQPNNPNQHQPIPLE KELVEHAKANVGDMLRVAIDTYPTREEFATAHIIQSMADKADTEIIIPQTILEFGLPYEF PDEVIKEAESFKEPAEQDREGRVDLRDLALVTIDGEDARDFDDAVYAEKRPGGGYRVVVA IADVSHYVRLDSALNEEAEERGTSVYFPHFVLPMLPEALSNGLCSLNPHVDRLCMVCDLK LSRTGRVTGYEFYPAVMHSKARLTYTQVGQYFEGATDAIPKDRDIHKSLNTLFQLYQILK NLRVDRHAMEFETIETYMTFDELGGIKEILPRTRNDAHKLIEECMLLANVAAAEYALEHD IPMLYRVHEAPEFSRIQKVKDFVKLLGLPFPDQPTQADYQKVIEATKDRIDAPSIHAVLL RSMMQAYYGAKNAGHYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLKQKPYPLSGAALDD AGEHFSQTERRADEASRSVTTWLKCHYMQQHLGDEFIGIVSAVTEFGLFVTLKDLYVDGM IHISQLGDDFFIYDQASQNLIGQNRGQVFGLGDEVKIQVAGVNLEERKIDFQLIKQVTHA GRVVRSRAPRTTKTSTQATEEVFGKPSVSTDGEKPVRKKKEKGKPSSYSKKSGKKTSTKA EAKPEKVKKKAKPKKKKSNAKSKAD >gi|333032474|gb|GL891952.1| GENE 5 4651 - 6705 2356 684 aa, chain + ## HITS:1 COG:PA0067 KEGG:ns NR:ns ## COG: PA0067 COG0339 # Protein_GI_number: 15595265 # Func_class: E Amino acid transport and metabolism # Function: Zn-dependent oligopeptidases # Organism: Pseudomonas aeruginosa # 16 676 13 675 681 664 51.0 0 MWLLAMTLQQATLPTPRFDQITLDNLKQDIQQAIQAGQEFLNTLTAAPSETDQQLAVLEQ IDALENNLSESWGVLSHLNAVMNNAETREVYQSLLPALSEYYTQLGQHTALYQTYQLIHD SQSYSKLSPAQQSAIRLALRDFKLSGVALEGEEKKRYAEISARLSQLSSDFSNHVLDATQ AYFKPLTEDELKGLPESNVELLKQYGKQRELDQAVATLDFPAYFAIMTYADDRALREELY KAYVTRASDQSEQTEFDNSKIMEEILSLRQEMAKLLGFNNYAEYSLASKMAPDVKTVHDF LVDLAEHARTPALQEVAELQAIAKQDGIDELKPWDTTYYSEKLKQQQFNLSQEALKPYFP APKVIQGLFQIVQRLYGINIVEREAPVWHPDARYFELEDQGEVVGGFFFDLYARTGKRGG AWMSGFRSRMQTVHGLQKPICYMVCNFTPPVGNQPALLTHDEVITLFHEFGHGLHHMLTE VDNISVAGTHGVAWDAVELPSQFMEFWSWDKESLDVLSEHIESKQTLPQELLDALLNARF FQSGMQTLRQLEFALFDLTIHTKTPALNSEQIQQTLNDIRKQYAVVPTVDYNRFQHSFSH IFAGGYAAGYYSYKWAEVLASDAFDRFENEGIFNTQTGKEFRQAILAVGGKDTALEAFVN FRGREPKIDALLRHQGWTNDNKTA >gi|333032474|gb|GL891952.1| GENE 6 6746 - 6955 204 69 aa, chain + ## HITS:1 COG:no KEGG:ABSDF0459 NR:ns ## KEGG: ABSDF0459 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 69 7 75 75 129 100.0 4e-29 MKKRFIAGAKCPKCEAIDRIVMLTTAEDEWIECIECGYSENRPTHIDEPETPAIPDEIGV IQFKPRRSD >gi|333032474|gb|GL891952.1| GENE 7 6967 - 7398 434 143 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03244 NR:ns ## KEGG: ACICU_03244 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 143 1 143 143 207 100.0 1e-52 MPLQRKQNSKLLWILIGGLSILVVLFFAAQWFFKKTETSAPMVDPQPASVPAPEKTTNPS ESSEPVVQTQTANSQQLVNEDVLKQPIPAQESLAKEEVSKLNDIHRQLQDQEATLKAQHA DADQLIKLKEEQVKLLEAQVKQQ >gi|333032474|gb|GL891952.1| GENE 8 7547 - 9742 2412 731 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03245 NR:ns ## KEGG: ACICU_03245 # Name: not_defined # Def: putative integral membrane protein, transporter # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 731 1 731 731 1378 99.0 0 MQEYQEKRSGLGLLGYIWNEWISTFIILILLLMTLIIGTGEMIHGQLLRIGERLYGDPAT GMQYSFLRAEPEKPTCDRHPNIDAQVKEQMKANASDDFASFFGAASESDVRASLLAAQQQ CEEKYQAYDKTIKYIEANPGVRTYRAIETGFFGIFKFGTENRAILLVFMVLISAITASLK YHHIGLRNPATKIDYKVYSLFMLIGNALLSFSVISQYRSVINSGVTPTYETVTIYWIWVI LFVVLTLISLYQLFVSPPPKREGGNIGLALLSVPLYAYMALITGIVFTFFMDYPMGQGIY LGLLVEFSGIFLNLALFIWAGMLLTQTRVMDLFLNVLRPWNLAPETLTWLILIAAAVPTA YTGASGIFVIAAGAIIYKEVWNAGARRQYALAVSAMSGSLGVVVRPCLLVVLIAMLDSRH VTSDELFGHGIYVFWLTAFIFLGVSLLLAEEKFRVNSPKVALPGMARAFVPVIPYILITV VVLAFYKYALDTGMNEFTAPVILPLVLIAMILYDKMVMPKEAPALNIHEAIVREHEKKSP FLQTHDPHSSQFRLGFSGALRFATSETVGHIGALIILMALSASVGGLIERSEVVELLPTH LGSIYISLACIALLLAIIGMCTDPFGAVILVAATIAPVAYENGIHPIHFWMIVLVAFEFG YVTPPVALNHLLTRLSVGDDEVNAADAEAKEKYTSFYYRYERWLLPIIVLFSSLVLVTYA PLILKLFGWYK >gi|333032474|gb|GL891952.1| GENE 9 9930 - 10496 319 188 aa, chain - ## HITS:1 COG:VC1981 KEGG:ns NR:ns ## COG: VC1981 COG0705 # Protein_GI_number: 15641983 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Vibrio cholerae # 39 167 75 199 222 59 33.0 4e-09 MKDHVLNKKVLLVAGCISVSACLQVFPDYFIYWRESLLGEFWRLWTAHWVHVGWIHFLLN MMAFACLPFIFPHTKVWHILSLLILLPPFISLVFYFYLPNIDAYAGLSGVLHGLYTAVAL VYLQYRKERNFAFLVLGLIVAKLIWENTFGQTGTAQLIGSPVLTEAHLYGAIGGAIFGGC YWLIQRFK >gi|333032474|gb|GL891952.1| GENE 10 10574 - 11659 1284 361 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000463 NR:ns ## KEGG: ABBFA_000463 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 361 1 361 361 702 100.0 0 MSKVQKICQGLAVSFLAASVLSGCSYVVKSGANVALGFTEKHVVPPILAMQDAEMVCNTG SALTPAIMSTKGMGADPTRVAVLMYAASGVCAENQALEQELRYLRASKAGQVTEAQDARI AQKRWAAIAAERQYAGYKLFADRWESKYKYHLGDSCPTMRSDIDQTVYLLGMISGLQAVT NDINSGGSVNVPKDIAAIVERGMVCLDNQKFWGAPNATRAVIWTLLPGANEGKPDPYETL KQSVQIGEQKGVRLSHALYAVAAQASGDDAKIRDALKTYAASQADDKPVNPNFKLIDSMA GLIVRGISDRYWTEHTGVRTGDDGMSHFWDEKNEGSAELDELFDGGAASEAPADTKTAPA Q >gi|333032474|gb|GL891952.1| GENE 11 11892 - 11993 150 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEISMWMFLLIAVIMAVVVGRAGTLLKDYLEQQ >gi|333032474|gb|GL891952.1| GENE 12 12429 - 12806 123 125 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03248 NR:ns ## KEGG: ACICU_03248 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 125 1 125 125 182 100.0 3e-45 MNFKLKYSRFSIIFQFFIGLSLAVLFYQLMPLLWWLVVISLLFISFIFFLKRPQLAQIAY LDKKLWSLAYKSQNTVSRVKILKIIDCQIFIVIYFEGHKTLTSIIWFDQMSLAEWKKLKT LEKLY >gi|333032474|gb|GL891952.1| GENE 13 12825 - 13082 395 85 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000461 NR:ns ## KEGG: ABBFA_000461 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 85 1 85 85 147 100.0 2e-34 MSEEMTLEERKVIYRARRGLKEIDVYFDPYVKNYYLKADPAEKALFAELVEQEDPDLLDW FMEVSEPPRTELRDFIYKLKHYVHG >gi|333032474|gb|GL891952.1| GENE 14 13270 - 14442 1431 390 aa, chain + ## HITS:1 COG:PA4435 KEGG:ns NR:ns ## COG: PA4435 COG1960 # Protein_GI_number: 15599631 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 12 390 4 381 381 477 60.0 1e-134 MQSGAIRPIPNMLPRHLFNEEHEAFRETVRKFYEKEVVPNIEKYEKQQHVDRDLWNKAGA LGLLCTTMPEQYGGAGVDRLYSMILIEEQAYAMDSSTGFSLHSDIVANYINNFGNEEQKQ KWLPKMATGETVTAIAMTEPGTGSDLQAVRTTAVLDGDEYVINGSKIFITNGYLCDMAIV VCKTGNSDKGSANLSLIIVEADRAGFTKGKPLNKIGMKGQDTCELFFDNVRVPKENLLGM EGMGFIMLMKELAWERMLVAIICQAGAEAAFAHTVQYTKDRKAFGKPIGAFQNTRFKLAE LRTEIDFCRTYLDRCMELQLDEKLSVEAAAAAKYKISDMFSKVVDECLQLHGGYGYMMEY PIARAYIDHRANRIYAGTNEIMKELISRTL >gi|333032474|gb|GL891952.1| GENE 15 14491 - 15981 1580 496 aa, chain - ## HITS:1 COG:MT3168 KEGG:ns NR:ns ## COG: MT3168 COG2072 # Protein_GI_number: 15842653 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted flavoprotein involved in K+ transport # Organism: Mycobacterium tuberculosis CDC1551 # 1 481 1 485 495 546 52.0 1e-155 MEKQVDVLIIGAGISGIGVAAHLSKNSPQRQFEILERRESFGGTWDLFRYPGIRSDSDMS TFGFNFKPWRKANVLADGASIKGYLGEVIDEFKLKEKIHFGHRVLSANYDSALKKWHVIV EDNKKKQQTWVANFVVGCTGYYNYDQGYAPTFPNQEAFKGQLIHPQHWPENLDYKGKKVV IIGSGATAITLVPAMSKGGAGHVTMLQRSPTYIASVPSIDFIYEKTRRFMSEEAAYKFTR ARNIGMQRAIYALSQKHPKTVRRLLLKAIEMQLKGKVDMKHFTPSYNPWDQRLCVVPDGD LFKILREGKASVETDQIEKFTETGIQLKSGKHLDADIIVSATGLQVQIMGGVQATIDGEP VKSSEHMLYNGVMLSDVPNMAMIIGYVNASWTLKVDIAADYICRLLNYMDKNNYDEVIPS GDKSVMEEDTVMGSLSSGYISRAADVIPKQGKQAPWQVTNNYLEDRKSLKNAKFDDGVLR FHKHSEVTTRKPKLVS >gi|333032474|gb|GL891952.1| GENE 16 16163 - 16540 626 125 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632376|ref|YP_001706112.1| 50S ribosomal protein L17 [Acinetobacter baumannii SDF] # 1 125 1 125 125 245 100 5e-64 MRHRNSGVKLGRTSSHRKAMFQNLANSLFEHELIKTTLPKAKELRRVAEPLITLAKNDTV ANRRLAFARTRNAATVGKLFTVLGPRYKERNGGYLRVLKAGFRAGDAAPMAYVELVDREV NTSAE >gi|333032474|gb|GL891952.1| GENE 17 16559 - 17566 1299 335 aa, chain - ## HITS:1 COG:PA4238 KEGG:ns NR:ns ## COG: PA4238 COG0202 # Protein_GI_number: 15599434 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Pseudomonas aeruginosa # 1 329 1 330 333 458 71.0 1e-129 MTRTANEFLTPQAIKVEAVSGTSATVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDITAADLRLPHN VEVVNPEHLIGTLSATGSLKMRLKVSQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQTPVA QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR >gi|333032474|gb|GL891952.1| GENE 18 17584 - 18210 1045 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632374|ref|YP_001706110.1| 30S ribosomal protein S4 [Acinetobacter baumannii SDF] # 1 208 1 208 208 407 100 1e-112 MARYIGPKCKLSRREGTDLQLKSGVKPFDVKTKKANKAPGQHGQARGGKQSEYSLQLREK QKVRRIYGVLERQFSNYYKEAARVKGATGENLLKLLESRLDNVVYRMGFGSTRAEARQLV SHRSITLNGRRVNIASIQVKAGDVIAVHEGAKQQLRIKNAIELAAQRGIPAWIEVDHSKL EGTFKAAPDRSDLPAEINESLIVELYSK >gi|333032474|gb|GL891952.1| GENE 19 18223 - 18609 658 128 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50086192|ref|YP_047702.1| 30S ribosomal protein S11 [Acinetobacter sp. ADP1] # 1 128 1 128 128 258 100 9e-68 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC RPPKKRRV >gi|333032474|gb|GL891952.1| GENE 20 18629 - 18985 597 118 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643074|ref|YP_001086058.1| 30S ribosomal protein S13 [Acinetobacter baumannii ATCC 17978] # 1 118 1 118 118 234 100 1e-60 MARIAGVNIPDNKHAVISLTYIFGIGRHTAKNILAAVGITETTKIRELDDAQLDAIRAEV AKVPTEGDLRREISMNIKRLMDLGCYRGLRHRRSLPVRGQRTKTNARTRKGPRKPIKK >gi|333032474|gb|GL891952.1| GENE 21 19093 - 19209 197 38 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|50086194|ref|YP_047704.1| 50S ribosomal protein L36 [Acinetobacter sp. ADP1] # 1 38 1 38 38 80 100 3e-14 MKVQASVKKICGSCKVIRRNGVIRVICSAEPRHKQRQG >gi|333032474|gb|GL891952.1| GENE 22 19230 - 20588 1112 452 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 22 438 19 434 447 432 52 1e-120 MSMSPSSSGHVNMMKGQPFHVKYREIIRRMSFLIGALLVFRLGAHIPVPGINNAALENLF HANQGTILGLFNMFSGGALERMSILALGIMPYISASIIVQLMSTVIPSLEALKKEGEQGK RKINQYTRQGTLLLAVVQAVGMCAGLIGQGITLSSGLAFYIPAVTSLVAGTMFLMWLGEQ ITERGIGNGISMIIFAGIVAGLPKLIMQSVSSVDNGQTSLIGLVIFGLLSLGVLAAIVFI EKAQRRIPVNYAQKQQGRRIFTAQQTHLPLKINMAGVIPAIFASSLLLFPASLGQWVGSA DPNAGLIKRSLQDLALVLSPGQPLYLVLFGALIIFFCYFYTALVFSPKEVSENLKRSGAY VPGIRPGEQTARYLDHILNRLTFIGAIYITVICLMPMILQSSFGIPFYLGGTSLLIVVVV VMDFMAQLQAHLTSHQYDNQTLMRKTTAHPKG >gi|333032474|gb|GL891952.1| GENE 23 20595 - 21035 715 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643077|ref|YP_001086061.1| 50S ribosomal protein L15 [Acinetobacter baumannii ATCC 17978] # 1 146 1 146 146 280 100 2e-74 MTLRLNELAPAEGAKREHRRLGRGIGSGVGKTGGRGIKGQKSRKSGGVRPGFEGGQTAIY RRLPKFGFTSQIALKTAEVRLSELSKVEGDIVSLETLKAANVVRRDQIRARIVLSGEITR AFTVQGVALTKGAKAAIEAAGGKVEE >gi|333032474|gb|GL891952.1| GENE 24 21039 - 21215 298 58 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643078|ref|YP_001086062.1| 50S ribosomal protein L30 [Acinetobacter baumannii ATCC 17978] # 1 58 1 58 58 119 100 5e-26 MKTIKVTQTKSSSHRLKNHKLCLQGLGLRRIGHTVEVQDTPSNRGMINKVYYMVSVEE >gi|333032474|gb|GL891952.1| GENE 25 21222 - 21719 818 165 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632367|ref|YP_001706103.1| 30S ribosomal protein S5 [Acinetobacter baumannii SDF] # 1 165 1 165 165 319 100 3e-86 MAKVEQNEGLVEKLVAVDRVAKVVKGGRIFSFTALTVVGDGNGRVGFGRGKAREVPAAIS KALEAARRNMITVDLAGTTLQHPVNARHGASRVYMQPASEGTGVIAGGAMRAVLEAAGVH NVLAKCYGSTNAANVVNATFKGLRDMTSPEKVAAKRGKSVEEIQG >gi|333032474|gb|GL891952.1| GENE 26 21722 - 22072 571 116 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169794610|ref|YP_001712403.1| 50S ribosomal protein L18 [Acinetobacter baumannii AYE] # 1 116 1 116 116 224 100 1e-57 MNEKKQSRLRRAKSTRLHIRALGATRLCVNRTPRHIYAQVISADGGKVLAQASTLDASLR SGTTGNIEAATKVGALIAERAKAAGVTKVAFDRSGFKYHGRIKALADAAREGGLEF >gi|333032474|gb|GL891952.1| GENE 27 22087 - 22620 884 177 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169794609|ref|YP_001712402.1| 50S ribosomal protein L6 [Acinetobacter baumannii AYE] # 1 177 1 177 177 345 100 6e-94 MSRVAKAPVTVPNGVTVTQNGRQVEVKGSKGTLSFNLHALVELKQEEGKLQLAPAKESKD AWMQAGTARAVLNNLVKGVSEGFERKLQLVGVGYKAAVKGTVVNLNLGYSHPIDYALPEG VTAETPTATEIILKSANKQLLGQVAAEIRAYRSPEPYKGKGVRYSDEVILRKEAKKK >gi|333032474|gb|GL891952.1| GENE 28 22634 - 23029 634 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632364|ref|YP_001706100.1| 30S ribosomal protein S8 [Acinetobacter baumannii SDF] # 1 131 1 131 131 248 100 6e-65 MSMQDTVADMLTRVRNAQMAKKQTVSMPSSKLKVAIANVLQQEGYISNVEVAQEETKSTL TITLKYFEGKPVIEMVKRVSRPGLRQYRGKDKLPSVKQGLGIAIVSTSKGIMTDRAARAA GIGGEVIAFVS >gi|333032474|gb|GL891952.1| GENE 29 23041 - 23346 515 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169794607|ref|YP_001712400.1| 30S ribosomal protein S14 [Acinetobacter baumannii AYE] # 1 101 1 101 101 202 100 4e-51 MAKKGMINRELKREKTVAKYAAKRAELKATIANVNASDEERFEAMLKLQALPRNASPVRL RNRCGLTGRPHGYFRKFGLSRNKLRDTVMQGDVPGVVKASW >gi|333032474|gb|GL891952.1| GENE 30 23356 - 23892 901 178 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632362|ref|YP_001706098.1| 50S ribosomal protein L5 [Acinetobacter baumannii SDF] # 1 178 1 178 178 351 100 6e-96 MARLKARYNDELKAKLQEELSIKNVMEIPRITKITLNMGVGAAATDKKLLDGAVADMQLI AGQKPVVTLARKSIAGFKIRDGWPIGCKVTLRGDQMYEFLDRLISIAIPRIRDFRGFSAK SFDGRGNYSMGLKEQIVFPEIDFDKIDRIRGMDITITTTARTDDEGRALMRAFGFPFK >gi|333032474|gb|GL891952.1| GENE 31 23908 - 24225 513 105 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632361|ref|YP_001706097.1| 50S ribosomal protein L24 [Acinetobacter baumannii SDF] # 1 105 1 105 105 202 100 6e-51 MAKIKKGDQVIVIAGKEKGKQGTVLSVSEDRVKVEGLNLVKKHQKPNRVTGAEGGIVTQE ASLHISNVAILNATTQKADRVGYQVIDGVKTRVYKSTGESVAVAK >gi|333032474|gb|GL891952.1| GENE 32 24235 - 24636 658 133 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226953881|ref|ZP_03824345.1| 50S ribosomal protein L14 [Acinetobacter sp. ATCC 27244] # 1 133 1 133 133 258 98 9e-68 MTGDARFWSRAMIQTETMLDVADNSGARRVQCIKVLGGSHRRYASVGDIIKVTVKEAIPR ARVKKGDVMNAVVVRTKFGIRRPDGSVIRFDDNAAVILNNNKAPIATRIFGPVTRELRTE QFMKIISLAPEVL >gi|333032474|gb|GL891952.1| GENE 33 24696 - 24953 419 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643087|ref|YP_001086071.1| 30S ribosomal protein S17 [Acinetobacter baumannii ATCC 17978] # 1 85 1 85 85 166 100 5e-40 MSEKTVRTLTGKVVSDKMDKSIVVLIERRVQHPLYGKSIRRSTKLHAHDENNVAKIGDVV TIKESRPISKTKAWTLVEVVEAAAE >gi|333032474|gb|GL891952.1| GENE 34 24950 - 25147 316 65 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643088|ref|YP_001086072.1| 50S ribosomal protein L29 [Acinetobacter baumannii ATCC 17978] # 1 65 1 65 65 126 100 4e-28 MKTKDLREKSVEELKALLDEQQLNQFRLRMAKATGQLGKSHEVQVARKTIARIKTLLTEK QGNGQ >gi|333032474|gb|GL891952.1| GENE 35 25147 - 25560 697 137 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169794601|ref|YP_001712394.1| 50S ribosomal protein L16 [Acinetobacter baumannii AYE] # 1 137 1 137 137 273 100 3e-72 MLQPKRTKFRKVHKGRNTGLAHRGSTVSFGSIAIKATERGRMTARQIEAARRTISRRIKR GGKIFIRVFPDKPITEKPLEVRMGNGKGNVEYWVCEIKPGKILYEIEGVNEDLAREAFAL AAAKLPFKTTIVTRTVM >gi|333032474|gb|GL891952.1| GENE 36 25564 - 26316 1272 250 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169794600|ref|YP_001712393.1| 30S ribosomal protein S3 [Acinetobacter baumannii AYE] # 1 250 1 250 250 494 100 1e-139 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRGRGRGEGQERRGR RGDRAADKGE >gi|333032474|gb|GL891952.1| GENE 37 26318 - 26650 533 110 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632355|ref|YP_001706091.1| 50S ribosomal protein L22 [Acinetobacter baumannii SDF] # 1 110 1 110 110 209 100 3e-53 MMEVTAKLRGAAISAQKARLVADLIRGKSVAHALNILNFSNKKAAVLVKKALESAIANAE HNNSLDVDDLKVSTIYVDEGMSLKRIMPRAKGRADRITKRTCHITVKVGV >gi|333032474|gb|GL891952.1| GENE 38 26659 - 26934 478 91 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632354|ref|YP_001706090.1| 30S ribosomal protein S19 [Acinetobacter baumannii SDF] # 1 91 1 91 91 188 100 7e-47 MPRSLKKGPFVDAHLFAKVEAAVASNSRKPIKTWSRRSMILPDFVGLTISVHNGRNHVPV IVTEHMVGHKLGEFAPTRTYRGHGVDKKSKR >gi|333032474|gb|GL891952.1| GENE 39 26948 - 27772 1455 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632353|ref|YP_001706089.1| 50S ribosomal protein L2 [Acinetobacter baumannii SDF] # 1 274 1 274 274 565 100 1e-160 MPIQKCKPTSPGRRFVEKVVHDHLHKGAPYAPLVEAKKRTGGRNNNGHITTRHVGGGHKQ HYRIVDFKRNKDGVPAVVERIEYDPNRTAHIALLKYADGERRYIIAPKGLRAGDKVQSGN DAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGRDGSYAIIRLRSGE MRKVHVECRAVIGEVSNQENNLRSLGKAGAARWRGVRPTVRGMAMNPIDHPHGGGEGRNK GIQPVSPWGQKAKGYKTRTNKRTTKMIIRDRRVK >gi|333032474|gb|GL891952.1| GENE 40 27784 - 28104 521 106 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643093|ref|YP_001086077.1| 50S ribosomal protein L23 [Acinetobacter baumannii ATCC 17978] # 1 106 1 106 106 205 100 7e-52 MNNERIYQVLKGPVFSEKAQVLGDTAGVQVFKVDINATKLEIKKAVEKLFGVEVVKVNTT ITKGKTKRFGRTLGRRSDVKKAYVTLKAGQDVEMADLGDTAESAAE >gi|333032474|gb|GL891952.1| GENE 41 28101 - 28703 991 200 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643094|ref|YP_001086078.1| 50S ribosomal protein L4 [Acinetobacter baumannii ATCC 17978] # 1 200 1 200 200 386 99 1e-106 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAHKSRADVSGGGKKPFR QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI AFDKVVMSVAAAKKIEVELG >gi|333032474|gb|GL891952.1| GENE 42 28715 - 29359 1087 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978] # 1 214 1 214 214 423 100 1e-117 MHMAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRE SRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKG KGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGL EIVSVDTERSVLVVKGAIPGATGGDVIVRPTIKA >gi|333032474|gb|GL891952.1| GENE 43 29411 - 29758 577 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|226953870|ref|ZP_03824334.1| 30S ribosomal protein S10 [Acinetobacter sp. ATCC 27244] # 1 115 1 115 115 226 99 2e-58 MILYIFGLEFTGMSNQRIRIRLKSFDHRLIDQSAQEIVETAKRTGAQVCGPIPMPTRIER FNVLTSPHVNKDARDQYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVDVQIALG >gi|333032474|gb|GL891952.1| GENE 44 29974 - 30702 534 242 aa, chain - ## HITS:1 COG:slr0541 KEGG:ns NR:ns ## COG: slr0541 COG0518 # Protein_GI_number: 16332036 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Synechocystis # 5 242 1 231 236 166 37.0 3e-41 MKSHLRVHYFQHIAGEGFGSCYSFLKAHHATITATEFFALPVDLPLEIEALPHIEDVDLL LIMGGTMSVNDEANYPWLKIEKRWIRRYLAAGKPAIGLCLGGQLIANALGAAVSRNRYQE LGWSTVQRVPNLPKESFLLPEKINVMQWHSETFEIPKGAIHLAENSVCRNQMYQIGSNVL GFQFHPEMTPKVLNLLLENEQELSIFKGEYVQSLDELHHCDIQKFEQGNQLLNRAIEFVV NQ >gi|333032474|gb|GL891952.1| GENE 45 30870 - 32060 1002 396 aa, chain + ## HITS:1 COG:RSc1639 KEGG:ns NR:ns ## COG: RSc1639 COG0626 # Protein_GI_number: 17546358 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Ralstonia solanacearum # 9 394 14 398 404 267 39.0 3e-71 MKKHNNFQTQLIHAPRKAPQFIETVQPPLFRASTIIFKSTSHLFDRHWTDPYDYSYGTHG TPTTFTLGDNIAQVEGGLYCLLAPSGLSAINLVNSAVLATGDEVWVPDNIYGPNLEHLNY LKDQYGINVQVYNPIDVSSFQPSDKTKLLWLEAAGSVTLEFPDLKALVKKAKAHGVLTAL DNTWGAGLAFNAFDFSDEHLSVDLTIHALTKYPSGGGDILMGSVVTRDEKLHHRLFRMHA ILGISVSGDDTAQIQRSLAHMSLRYEQQSNNAKTLLTWLKEQPQFAQVLHPSDKAAPGHQ YWQEICSTGKSAGLVSVVFKSDYDISAVRRFCDALKLFKIGFSWGGPVSLVMLYDLKMMR KLENTHLQQGLLVRFCIGLEDPQDLIQDIENALKQM >gi|333032474|gb|GL891952.1| GENE 46 32104 - 33651 1781 515 aa, chain + ## HITS:1 COG:RSc2189 KEGG:ns NR:ns ## COG: RSc2189 COG0433 # Protein_GI_number: 17546908 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Ralstonia solanacearum # 1 514 1 530 535 557 54.0 1e-158 MGTPIVIAKNINDTSKEIVLLSQFANRHGLIAGATGTGKTVTLKVLAESFSRIGVPVFLA DAKGDVSSLAKAGEASDKFNERLKLLQIDSVPFAANPVVFWDLFGQQGHPIRTTISEIGP ILLARILNLNDTQEGVLSAVFRIADDQGLLLVDFKDLKAMITFVSEHAAEFKAEYGNLSP ASLGAIQRNLLALADQGGEQFFGEPALNILDFIQTDANGHGYINILAADKLMNTPKLYAT FLLWMLSELFEQLPEVGDMDKPKLVFFFDEAHLLFDNASQALQEKIEQVVRLIRSKGVGI YFITQNPLDLPESVLGQLGNRVQHALRAFTPKDQKAVKTAADTFRSNPDFKVDEAITELG VGEALISCLDEQGTPQIVERGWVMPPYSSFTPITPEERQTLISQSIIAGVYEQAVDRDSA YEMLQNKVAEREQQKQDAELAKQQAKEQETLAKQQAKEQERLAREQQKEEERAARERAKL TQDIVGTFAKSAARSLGGSTGQKLVRGLLGSLFGK >gi|333032474|gb|GL891952.1| GENE 47 33797 - 34561 919 254 aa, chain + ## HITS:1 COG:SMa1191_1 KEGG:ns NR:ns ## COG: SMa1191_1 COG1017 # Protein_GI_number: 16263102 # Func_class: C Energy production and conversion # Function: Hemoglobin-like flavoprotein # Organism: Sinorhizobium meliloti # 1 150 2 151 151 144 50.0 1e-34 MTPQQIELVKSTVPVLREHGVTLTTYFYKRMLNNNPELKNVFNLDDQTSLRQPRALAAAV LAYAENIENPTVLAKAVERITTKHVSLDIQPDQYAIVGDNLLHSISEVLNVPFESELIEA WKQAYLQLADILIGVEKQKYEQLESLKGGWAGWRSFEITQIDPLESGKRFTLKATDHEDV LTSPANAFISVKVQVPNQQLEQPKAFKFTEAQEDNTYHFDVQPEEDHTEFSVSNILLEHY RVGDQVQVSAPLTL >gi|333032474|gb|GL891952.1| GENE 48 34647 - 35084 348 145 aa, chain + ## HITS:1 COG:RSc3397 KEGG:ns NR:ns ## COG: RSc3397 COG1959 # Protein_GI_number: 17548114 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Ralstonia solanacearum # 1 133 1 136 172 113 38.0 1e-25 MQLNKFTDYALRILMYVARPSDAPYTIAEIAQDLYVSQNHLVKVVHFMGKQEWIITIRGK GGGIRLNPKALDLKLGTIVRILQGDHQIVECNTPPCVLRSHCGLKGILDQALESFYQSLD QYTLGEVLQQPKSASDHSPIAFLQL >gi|333032474|gb|GL891952.1| GENE 49 35193 - 35969 715 258 aa, chain + ## HITS:1 COG:HI1118 KEGG:ns NR:ns ## COG: HI1118 COG0218 # Protein_GI_number: 16273043 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Haemophilus influenzae # 43 226 10 192 205 197 56.0 2e-50 MRRSEKSKDTKARLAPKQKISYEKKPDPAITAYAVQSLNWLRQAEFLMSAPKLALCVEDS GYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSLGNPDQRLVDLPGYGY AAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHFDMMMLEWAYSRHLFVHILL TKADKLNRGPANKVLLEVKQQLKKMKLDFSIQLFSSLNKLGLEELASVMAGRLHFTLEQQ PEFDVDTIPEASDEDAEE >gi|333032474|gb|GL891952.1| GENE 50 36096 - 37043 987 315 aa, chain + ## HITS:1 COG:PA3325 KEGG:ns NR:ns ## COG: PA3325 COG3687 # Protein_GI_number: 15598521 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 14 310 2 292 295 251 42.0 1e-66 MKLLSFLKNKALGSSIDYKILPRKVKFDWKDTPVDWIPNQPFASYFINEINNILPAGEFW FCRLYNKVLPRITDEKLKQDVQAFIRQEAMHANAHTSANKEYLSARNIDIQRNLDIMNYL FTTALADKPFDKEVPQFLQEQWDLFRLGVIATVEHMTCVLGKYALYNKRWEELGADPEMV DLVKWHGSEEIEHRTVAFDLYRHLGGGYMPRYYLSLAVIVLVLGLWVDGAAHIMKQDPRF ADAAKSRFFPAWVALEWYKISRKDNQVLPNPIWLIAQQIDYLMPWYDPVKEGSTEDAVSY LSQSPAAKRAELQAA >gi|333032474|gb|GL891952.1| GENE 51 37086 - 38324 1190 412 aa, chain - ## HITS:1 COG:aq_1330 KEGG:ns NR:ns ## COG: aq_1330 COG1301 # Protein_GI_number: 15606533 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Aquifex aeolicus # 29 404 24 395 398 233 38.0 4e-61 MNLNTQILIAAILGLAFGFLLTMYPDTAFVKHSLYGLGILSSVFIGLLKMLLVPLIFSSI VVGVSNLQAGGQLGPVWKITFLCCITTTTLALILGISCAHLFEVGRGVDISIFQASMQSY QTPDSLNPATFFTNFIQNTLINPFKAFSDGNVLAVVVFALFVGVALVHGGERFKSIRVLS HQFFEMMMMLVGWVMKLAPLGIFALLAKLMATEDISVLSRLAEFAAVVTGTTIFHGAVVL PLLLWIFGRMSPWTFFKGTRTALITAFATSSSSATMPLSMKCAQENLGVRPQTAGFVIPL GTQLNMDGTALYEAAAALFVANLVGLDLNLTQQIVVCLTAMIASLGAPGIPSAGMVTMIM VLQSVGLPAEAIAILLPIDRLLDTVRTVVNVQGDMMISVVVDRYTKDKDISI >gi|333032474|gb|GL891952.1| GENE 52 38458 - 39330 1046 290 aa, chain - ## HITS:1 COG:PA3942 KEGG:ns NR:ns ## COG: PA3942 COG1946 # Protein_GI_number: 15599137 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Pseudomonas aeruginosa # 1 286 1 286 289 246 43.0 4e-65 MNALTQELVELLTLEKLEENIYRGISRNLVGKRVFGGQVLGQALRAASYTTDRPAHSLHA YFLYGGDINAPIIYEVDRLRDGKSFVSRQVRAIQHGRVIFSAMVSFANPEEGLNYQHPEP DYPAPEALKSESELKEGILNFVPENVRASFMRERHVEIRPIDPVNPFQPQPEAPFNAHYI RTHDRIPKQLDDISLHQAIVAFYSDFTLMTTALRPHGLSYISPSLQCASIDHAIYFHRPL RADEWMLYDMEATVSAASRGLNFGRMWQNGQLVCSTVQEGLMRLREIETQ >gi|333032474|gb|GL891952.1| GENE 53 39606 - 42176 2658 856 aa, chain + ## HITS:1 COG:PA3673 KEGG:ns NR:ns ## COG: PA3673 COG2937 # Protein_GI_number: 15598869 # Func_class: I Lipid transport and metabolism # Function: Glycerol-3-phosphate O-acyltransferase # Organism: Pseudomonas aeruginosa # 30 812 22 799 834 617 40.0 1e-176 MSKSGFGQMYRRLSSKLLDLVVTPHVLGEVPTEPVSTTETEAKTERQKVVCYVLQNHSRS NALVVDGETRRLNLKPALDPLVIGTHQEKASVLFLQHNDENNLLNPPPHAFPPRLIKLIE VLQANPELDIELVPVTVLWGRSPDKEDSWFKLLFSDTWATPSTVKQLVNIGLHGRQSYLE FHEPQSLRDLVEYAQKHYPNLSPATYIVSTLNDYLDRQREVVLGPDLSDRRNVMQSVLKS RDVQEAIRRESIRGKISMLEAERRAIGYVNEIVSDYSHSAVRFADLALTRLWTQLYDGVE VHNFSTVRELAKDYEIVYTPCHRSHIDYLLLSYVIYKRGLMVPYIAAGDNLNLPFVGQLL RGGGAFFIRRSFRGNGLYTSVFKEYLYSILSRNTPLEYFIEGGRSRTGRLLPPKTGMLAM TVHSHLRGRAKPIVFVPTYIGYERLMEGSTYVGEMQGKPKEAESIFGILKTLRKIERIFG KVHVNFGEPVFLDDLLKQHNAENVYIEKNDDPVPPAVSEAVNSSANAILENINRAVVINP VSLLSIILLATPKHTLDEEICIKQLEAYRNLASNFPYDQRTEVTPLSGKEIIAYGLKLKL IKRVQHALGDIIAIEDNQAVLLTYFRNNILHAFVLPSLIASLVEHNGKISRADLSNVIYT LYPFLKAELFLKWKSSELKEQIEQYADALVQSNLIQQDDEGNLISSAPNTEEHNQLVVLA TPVKQSLERYYMTLALITQRGSGNISAKQVEELSHLLGQRLSVLYEFNSPEFFDKALFQS FIKVLTQQNYIRTNDQGQIEFDDNFRQMAAGAQLVLDEVTLQMLQHITTFTDEELKEALE AMASQQAKRRLKRKKA >gi|333032474|gb|GL891952.1| GENE 54 42220 - 43206 686 328 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03292 NR:ns ## KEGG: ACICU_03292 # Name: not_defined # Def: putative RND type efflux pump # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 328 1 328 328 667 100.0 0 MKKFCLALFLSVTSVTSWAGDQVWCAYDPAGTQGDITRRLNDIRLYAQQYQVKFKVVSYQ KEQQAIQAFDEGKCSGLAASNFNTYQYNHFMGSTSGIGLIPNNRTARNLLQLLNHPTIEK RLINKDYEAVGMIPVGTANMVMKTKKISKVAQLRGQRIGVLANNPPQQALVRSVGAQPVY VDLSNAIAQFRQNKIDIMPAPVYGLLPYNLQKDFGPDTQVINFPLAYFGVNIIIKPQAYP ANFGRKIRAWFVQNSQLLTNRAIQWENHLPAYYWVDVSFYEKQSYDIMVAKIRNQYVRSG YYDAYFVELMKRLRCIDDPRYFECPMSR >gi|333032474|gb|GL891952.1| GENE 55 43286 - 44101 709 271 aa, chain - ## HITS:1 COG:PA5343 KEGG:ns NR:ns ## COG: PA5343 COG0451 # Protein_GI_number: 15600536 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Pseudomonas aeruginosa # 3 223 5 236 283 70 28.0 3e-12 MHILFIGYGKTSQRVAKQLFEKGHQITTISRSEKTDPYGTHLVQDIFTLDLSEIAPVDVV YILLSPDDSTVEGYQHTYVDSIEPIRQALKSHPVKRLIVVSSTRVYGENSGETIDDHSEI HPNDAQGHILHNMELLWQKYFPSQCVIVRPTGIYGASIDRLKRMAEHTQTYPNIHYSNRI HIDDLARFLAFLADFEKPHKSYLVANNAPVPLHEVLLWFQSQLDLPLLTLDSAHVSGKKI YAKHLFETGFQLEHPICFNDYLLCLNAHGTN >gi|333032474|gb|GL891952.1| GENE 56 44122 - 46167 1890 681 aa, chain + ## HITS:1 COG:PA5345 KEGG:ns NR:ns ## COG: PA5345 COG1200 # Protein_GI_number: 15600538 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Pseudomonas aeruginosa # 4 681 9 691 691 719 57.0 0 MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGE VKSVDFPPGKRKSMAALIQDEFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLE LYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVKQALKHHSDALPELLPKQYTN GYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAA CHALEADWQVALMAPTEILAEQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEG HAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLALRNKGAEQLTPHQLVMTATPI PRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTV IEVGVDVPNASIMVIENAERLGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSI LRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLERDDHLLSQAHYVAQQVLKDY PEQADALLKRWLPEAPRYAYV >gi|333032474|gb|GL891952.1| GENE 57 46160 - 46795 411 211 aa, chain + ## HITS:1 COG:HI0434 KEGG:ns NR:ns ## COG: HI0434 COG1040 # Protein_GI_number: 16272382 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Haemophilus influenzae # 31 206 51 229 229 94 34.0 1e-19 MFKFLNPQYLFQLLSPCLLCEIGTREKYSLCKECWEQLPWLKQTIQRNDQSVLVACHYAY PINRIIQQFKYEQKLHYQTLLAEVLQQLKFPKVQAIVPMPISKQRLTERGFNQSLLLANL LSKQLKIPVWQPVQRLNEHSQKGLSRLERFENIEQQFVALTQEKRRYRRVLIIDDVITTG SSIHALSQALKQLGCTSIHASCLAAASSTSY >gi|333032474|gb|GL891952.1| GENE 58 46798 - 47199 357 133 aa, chain - ## HITS:1 COG:PA3470 KEGG:ns NR:ns ## COG: PA3470 COG0494 # Protein_GI_number: 15598666 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Pseudomonas aeruginosa # 4 123 6 128 152 89 40.0 1e-18 MKTITVAAAVILNEQNELLLVRKRNTQAFMQVGGKLEPNEAPESAIQREILEEIGSPCVI EQFIGRFETAAANEPDHKLISHLYLVRLKQSPQIAAEIAEMKWVKFNDSETKLAPLTKEI VIPWCEQNLSITL >gi|333032474|gb|GL891952.1| GENE 59 47214 - 47795 689 193 aa, chain - ## HITS:1 COG:BH3084 KEGG:ns NR:ns ## COG: BH3084 COG1611 # Protein_GI_number: 15615646 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Bacillus halodurans # 4 185 3 184 187 194 50.0 1e-49 MNSICIFCGSSLGSNPIFQQIAQLTGEAIAKQGKTLVYGGGRSGLMGVVADSALQAGGQV IGVIPRALVDRELAHPGLTKLYVVENMHERKTKMADLSDGFIALPGGAGTLEEIFEQWTW AQLGIHQKPCAFLNVAGFYEDLLKMIQGTVDNGFSQARFVDKLIASDKIEDILQQFEQYQ APAPKWTNADVQP >gi|333032474|gb|GL891952.1| GENE 60 47953 - 48966 1227 337 aa, chain + ## HITS:1 COG:HI1035 KEGG:ns NR:ns ## COG: HI1035 COG0598 # Protein_GI_number: 16272969 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Haemophilus influenzae # 29 337 26 315 315 198 37.0 1e-50 MLEAFYATERGSLEDATINGGFDLHPELVWLDLIAPSQEEQQWVLDAYNQNLPTLKSLED ISSSARFYRDDDGILHISTYFLTKNKNYQVDGDAEDSSHMLAMVQTVAFILHKDRLFTLR GEKLVAFRAFRARARRNDYEMDYKDPTWILLGLLEAKLDELADILEDIHKDLEKYSTEVL NNHQREQILDLDDMITRLAQQEDMLGKAQLCLIDLRRVLTFLSRPRALGSHIYDADIREL SEDVRSLVEHDAFLFQKVRFLLDTTSGFINTEQNDTIRRFSILPSMLAPPMLIASIYGMN TDVLPFAHGTTSFIIVLLIIIGFFIGPIIYFRWKKWI >gi|333032474|gb|GL891952.1| GENE 61 49036 - 49323 244 95 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000413 NR:ns ## KEGG: ABBFA_000413 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 95 1 95 95 163 100.0 2e-39 MVQYLNQELVVSGKIDFENAEQQYQAGLAIIKKQTSFPLIVDLKQLEHGNTLALAVLVQW LRQTPQKSGLHFKNVPEKMLKIIQACHLQEDLHLV >gi|333032474|gb|GL891952.1| GENE 62 49335 - 49976 761 213 aa, chain - ## HITS:1 COG:PA4453 KEGG:ns NR:ns ## COG: PA4453 COG2854 # Protein_GI_number: 15599649 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, auxiliary component # Organism: Pseudomonas aeruginosa # 22 197 20 194 215 91 31.0 1e-18 MNTLFKQTLTASILSTMIAGTAFAAPSEAPPDFIKRVADGLISRLKADHAKLQNNPALVK TIVRQNLDPYVDSQAFTRIVMGTYATNQYSTAAQRAQFETNFRNTLIENYGSAFAKYTNQ TYTMRPYKATAGKNPVVTLDFNHNGEKIPVSFQLADKGSQWKIRNINVSGIDLGLQFRNQ FAATVKRNGGDLNKAIATFQPDADAAVNQNKQK >gi|333032474|gb|GL891952.1| GENE 63 50003 - 50683 765 226 aa, chain - ## HITS:1 COG:ECs4072 KEGG:ns NR:ns ## COG: ECs4072 COG1463 # Protein_GI_number: 15833326 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, periplasmic component # Organism: Escherichia coli O157:H7 # 1 219 1 176 183 84 30.0 2e-16 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSDGYTMKAQFDNVNGLKPRAKVTM SGVTIGRVDSITLDPVTRLATVTFDLDGKLTSFNAEQLKEVQKNALDELRYSSDYTQATP AQQKTMEQQLISNMNSITSIDEDAYIMVATNGLLGEKYLKIVPGGGLNYLKRGDTISNTQ GTMDLEDLISKFITGGGAGKVAAGSSSAEEKAPASTDSSAQPSFVE >gi|333032474|gb|GL891952.1| GENE 64 50683 - 51459 834 258 aa, chain - ## HITS:1 COG:PA4455 KEGG:ns NR:ns ## COG: PA4455 COG0767 # Protein_GI_number: 15599651 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: ABC-type transport system involved in resistance to organic solvents, permease component # Organism: Pseudomonas aeruginosa # 1 256 7 263 265 277 61.0 2e-74 MNTIAWLGRLVIERIRGIGVAALMLLQIIFSLPSAGGFGRFVYQMHRVGVMSLLIITVSG LFIGLVLGLQGYSILVNVGSESMLGTMVSLTLLRELAPVVAALLFAGRAGSALTAEIGSM KQSEQLASMEMIGVDPLKQIVSPRLWAGIVSLPMLTVIFAAIGIVGGKLVGVDFLGVDEG SFWSGMQNNVQFGHDVVNGIIKSIVFALLCTWIAVFQGYACEPTPEGIATAMTRTVVYSS LCVLGFDFVLTAVMFGGI >gi|333032474|gb|GL891952.1| GENE 65 51456 - 52286 184 276 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 5 231 1 221 312 75 29 9e-13 MIAIMNNKTPLSTQSLIEVKNLSFNRGERVIYDNISLNIRRGQITAIMGPSGTGKTTLLR LIGGQLVPDQGEVLLDGKDIAQMSRQELFAARARMGMLFQSGALFTDMSVYENVAFPIRA HTKLSENLIAELVALKLESVGLRGTEQLMPTELSGGMNRRVALARAIALDPDLIMYDEPF AGQDPIVKGVLTRLIRSLREALDLTTIIVSHDVPETLSIADYIYVVAEGKIQGEGTPEEL QAYASPFVKQFLTGSAEGPVEYQFSHQAYLDNEVRP >gi|333032474|gb|GL891952.1| GENE 66 52401 - 52586 109 61 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03304 NR:ns ## KEGG: ACICU_03304 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 61 1 61 61 109 100.0 4e-23 MFIVIMRKSKRKESPLAWLSKFLFQRGLPYLFIALALCNGIYFAYALLTGHFVDQFQVLD Q >gi|333032474|gb|GL891952.1| GENE 67 52678 - 54525 3095 615 aa, chain - ## HITS:1 COG:RSc0952 KEGG:ns NR:ns ## COG: RSc0952 COG0513 # Protein_GI_number: 17545671 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Ralstonia solanacearum # 8 573 35 604 608 336 41.0 7e-92 MSKTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLP TLHNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMG GMPFGKQIQQLKGAQVVVATPGRLLDLVNRRQLKLDKVDALIVDEADRMLDLGFSEDLEA ISDLAANRGQTLMFSATFADRIIRLAERMMNEPERIAIETGHSTNTDITQTLHWTDGFEH KKKLLTHWLADETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTVRNRRLRSI REGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGQAITLATY RERGKIRALEDYLEARLNVSEIEGLEPSPPPARPRREGGRGGNGGRDGRRGGGFGGGRRF EGEGNFKRREGGRDDRPRRSFDDKPRGERPAFGGEDRPRREFNSDRPRREGGFEDRPRRS FGGEDRPRREFNSDRPRREGGFEDRPKRSFGGEDRPRREFNSDRPRREGGFNDKPRFDSN DDNRGNRVDYKPRRENGFGDRPQRSFGGEDRPRREGGFGDRPKRSFGGEERPRRAVREEH FNQESRGERRRKFDR >gi|333032474|gb|GL891952.1| GENE 68 54935 - 55765 1142 276 aa, chain - ## HITS:1 COG:PA3818 KEGG:ns NR:ns ## COG: PA3818 COG0483 # Protein_GI_number: 15599013 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Pseudomonas aeruginosa # 1 269 1 263 271 249 48.0 3e-66 MEPMVVMAARAAQTVGQELLKAHQNRHKLDLQVEEKGIDGPVTRVDRYLEQLTIDTLRKS YKNHSFLGEEFGLQEGKGHDADWCWVIDPLDGTQNFINGFPHFCISIAVQHKGVTQHGVI YDPVRDELFSASRGRGAVMNQRRIRVNVKDSLENTFLAVGHPYRAKRAGEIVSYAEQHFA SLLAVTQAGAQIRRGGSAALDLAYVAAGRFDGFFELGLKPWDIAAGELIIKEAGGVVVDA RGGNDSLENGQVIACSLKMLKTLMQTVVPAWDKAAK >gi|333032474|gb|GL891952.1| GENE 69 55888 - 57792 2145 634 aa, chain - ## HITS:1 COG:PA4044 KEGG:ns NR:ns ## COG: PA4044 COG1154 # Protein_GI_number: 15599239 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Pseudomonas aeruginosa # 5 625 7 622 627 707 56.0 0 MLYTEIPTQRPVTPLLDAIDHPQQLRQLEHSQLLQVADELRQYILYAAGQSGGHFGANLG VVELTVALHYCFNTPNDRLVWDVGHQAYPHKILTGRREQITTIRAKNGLAAFPAREESVF DTFGVGHSSTAISAGLGMSLARRYQKDPCEVVCIVGDGAMTAGMAFEAMNDAVAHDADLI VVLNDNDMSISCSTGGFAKHLAAIWEKGHLVNVNEHGEAYIQPHPKWTYNSRLHQSATDA ADNLFKAIGFDYFGPFDGHDVTQLVQVFNALKKRKGPRLVHVYTKKGKGFAPAEADPITY HAIGKINAASGGKTPPKYSDVFGEWLCDEAAQDERLLAITPAMCEGSGMVKFAKQFPQRF FDVAIAEQHAVTLAAGMACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLDVTFGIDRAGL VGEDGPTHAGAYDYAYMRTVPNMVIMAPKDENECRQMLHTAYAYNGPAAVRYPRGAGVGV EIQKEMTVLELGKAEIVAEIKANSDEQITVLAFGSRVMVALEAAEQFAQKHDVSVCVVNM RFVKPLDEQMIRDLAEHTHLFVTVEEHAIMGGAGSAVNEFMAQEQIVKPIINLGLPDSFL HQATHNQMLQDCGLDAKGILNSIERAWLKVNQVV >gi|333032474|gb|GL891952.1| GENE 70 58096 - 58698 666 200 aa, chain + ## HITS:1 COG:DR0155_2 KEGG:ns NR:ns ## COG: DR0155_2 COG0807 # Protein_GI_number: 15805192 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Deinococcus radiodurans # 3 194 3 192 193 224 57.0 6e-59 MPIEFIATSKLPTAFGEFNISVFQDPVTGEEHVALSKGLENPPTGPVLVRVHSECLTGDA FASLKCDCGPQLQATQKLINEAGQGVILYLRQEGRGIGLTNKIRAYALQDQGHDTVDANL LLNLPADARRYDMCSIMLDHLKVKEVKLITNNPLKIQALKDQGINVVDRVPLTVGRNPFN EQYLKTKRERMDHLYQKDDF >gi|333032474|gb|GL891952.1| GENE 71 58826 - 59776 1127 316 aa, chain + ## HITS:1 COG:PA0024 KEGG:ns NR:ns ## COG: PA0024 COG0408 # Protein_GI_number: 15595222 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase # Organism: Pseudomonas aeruginosa # 9 310 5 302 305 389 59.0 1e-108 MQHPTSTDIQRVREFLLDLQARICAGLEQQEKAGGGTAEFIIDDWERPEGGGGHSRVLQN GTVIEKGGVMFSHINISKLPASATERHPQIAGAKAQALGVSLVIHPKNPNIPTSHANVRL FVAEREGQDPIWWFGGGFDLTPFYPDDQDVLNWHQAAYDLCKPFGDNVYAEHKKWCDDYF YLKHRDEQRGVGGLFFDDLNCWDFETCFKYIQAVGNGYLNAILPIFEKHREQPYTEAQRE FQLYRRGRYVEYNLVYDRGTLFGLQTGGRIESILVSLPNLAAWSYRPEWDEDSPEKRLTD YYLKPRDWLGLEEKVA >gi|333032474|gb|GL891952.1| GENE 72 59950 - 60738 874 262 aa, chain + ## HITS:1 COG:ECs4147 KEGG:ns NR:ns ## COG: ECs4147 COG0169 # Protein_GI_number: 15833401 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Escherichia coli O157:H7 # 3 259 2 260 272 210 44.0 2e-54 MTKQFAVIGNPIEQSRSPELHHAFAEKTGVDLNYQKRLAPLDGFESSMRSFFAKGGSGMN VTVPFKEQAFALCDVLTERAQIAKAVNTLWMENGKLHGDNTDGQGLVAAIQALEWNLENT TILILGAGGATRGVIYPLVQAGAKKIVIANRTLARAEQLVDDLKTAVPQAQLQAISLNDL EGDFDIVINATSASLSGDALQLPEKLKFKYAYEMAYGKPSSFLDQAKQRNVPYAEGFGML VGQAIEAFSIWNNVRPQLKDFL >gi|333032474|gb|GL891952.1| GENE 73 60784 - 63087 2212 767 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03311 NR:ns ## KEGG: ACICU_03311 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 767 1 767 767 1316 100.0 0 MHLKYLSLCLFSLGLTACAQHGVRPQVASASLEQKAIQSVNAMYEYPSYDYRGNFKITVD PSQIKQNVKAENTAKLDAELQKKVDQYLREQKVALSKAQKQTLYTAIANEQGDLGLTSSA RSEKINTVLFNLLNDLQFSYDGSIHYRQKMGSFNLTARYEKPTLLVQAKLPMVLDLENYK FYINYFGLMPYLVNKDNQNNLAYVDFSKYKAFFKNVDKKKFIEYLKASSAVSYRLAEPQN LQRVSLTEADRKAGAVEKIRLKTTVEQLLLEVDLFGQVNEKYLQKSVLGLDEEKLAETLA AEIAASDAKKGTAGKEEQKVSSDDAAAVSQQLYSLVNAHLGNTSTSEDEEIESASSEEAS DVAVAEAEQTSENEEVVALTEDQCIELKSLKKPVALGDINYCQIYGIDVLDQSDTSIQKA QIKSRQDALKQTFEAYNQNQFINDEAFKALWLKHKDEIEQALPKQRNPITIDVALDDKGR AVNMDYDVDYTPAEFKHRFNIKADMQILNYGKATSIDQQQLKQAKSVAEASKGSMLENFI KGFSEKLGQSDVSEHPVGTHSDVQDLDANLAVLADKTYDATHAYDKTYKAVFIAKLTAEK PSYIKYYSVQQLQEIAEVYAYWFSDEDTYNPQGKALERITALQKKHHLEQDDQFDHELGR AVDHIVLTTIQGKTGREAWQKLQKQYKQPAQLFSKQYQLEFEKQNGVSAEEKHLLSETAD ILGNVYVAARKKQLSEKTIQNLKPEHNEFIDYEIFREVYKQMVAARK >gi|333032474|gb|GL891952.1| GENE 74 63345 - 65168 2157 607 aa, chain + ## HITS:1 COG:PA1284 KEGG:ns NR:ns ## COG: PA1284 COG1960 # Protein_GI_number: 15596481 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 606 1 606 606 853 66.0 0 MPAYKAPLHDIRFLMNEVLDYPAHYKTLSNGESADPDTVDMILEGAADYCENVLSPLNQS GDEEGCHFDNGEVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLPMSLNLIKSEMMGTA NWSFTMYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGTMCLTEPQCGTDLGQVKTK AEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFIPTAE GGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTARIGTA VQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAIAEGG RSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGMQVYG GHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEILKFCA AHARNKYLRRFAWDLTKLCAQWNTLTVRIMLAARKDRDIVSSASVDFLMFSGYVMMAYFW AQQAVVASEKLEAGNGQETPEFYKAKIKVADFYFDRLLPRAQGHAESMVTTSRTLTSLPA EHFSFDY >gi|333032474|gb|GL891952.1| GENE 75 65241 - 65888 565 215 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0381 NR:ns ## KEGG: ABSDF0381 # Name: not_defined # Def: putative signal peptide # Organism: A.baumannii_SDF # Pathway: not_defined # 1 215 4 218 218 437 98.0 1e-121 MSLKSSGLLMKHLGVAAILCMGLSACDVNHADSKDHSAVATTSRHEDSLIKSTTKVKTLD DAAGRTFLPEGVPDQTSKLSEADQQYAGRYHTRISCEDNFADCETGEAEYILNLLPDGTA YWNVVHFGRVGSKDGSKSAVINQLCPSLKWKVEPAVHELTIQCPLSDVNFYFDIDAKQRL VVNLEKLFYSDFGKNREFLEQNYFVPTKAYVLDKE >gi|333032474|gb|GL891952.1| GENE 76 66142 - 66396 357 84 aa, chain + ## HITS:1 COG:BS_yvlC KEGG:ns NR:ns ## COG: BS_yvlC COG1983 # Protein_GI_number: 16080564 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Putative stress-responsive transcriptional regulator # Organism: Bacillus subtilis # 6 64 4 62 65 61 44.0 4e-10 MANSGLYRSNRQSMIAGVMGGIAERFGWNANLLRIIFVLVSIMSAAFPGILVYLVLWLVI PKKQPEQVQGYQQPVRTVREEQIH >gi|333032474|gb|GL891952.1| GENE 77 66466 - 67566 1002 366 aa, chain - ## HITS:1 COG:mll8143 KEGG:ns NR:ns ## COG: mll8143 COG3448 # Protein_GI_number: 13476736 # Func_class: T Signal transduction mechanisms # Function: CBS-domain-containing membrane protein # Organism: Mesorhizobium loti # 21 357 15 345 361 227 39.0 2e-59 MSVIQPEWLQILKPNFKVLPLKERLLCGVGALCGLAISSLISWYVLGGINAWYIAPMGAS SVLLFAVPTSPLAQPWNVIVGNTLAGIIGVACAQWIPDLTTAFSVAVGFAIFLMMTTDSL HPPSGAVAITAVLGGAAIHKLGFYFVFYPVLLNSLLLLGFAVFFNRLIGRHYPVTAHLNE RSKDPTPTQKVSIQPKDIEYALEHHTELLDISQYDLEKIILEAQEHANERMVNQYTCQDI MSRDVIKLHENDDIHQALDKFKQENLMSLPVVNADNHLVGTLALYEVVEWFKGATDPRNS WQHYVRQIMSRRVVTVLPTQPIQDLVPYFVEKSFNYIPVVEERKLIGIISRADMIAALQQ QLNRKL >gi|333032474|gb|GL891952.1| GENE 78 67699 - 68496 669 265 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03316 NR:ns ## KEGG: ACICU_03316 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 265 1 265 265 488 100.0 1e-137 MFNEEVAYYFDGSMVGLLSCVFRAFQFKELQVRLCLNDAAQHGLFADKIEVSNNEQHAER VWSALQKKLSSSSLKQFYFASLSESLDAYQHLFNYCIYVFSSHSSVEKDYSHPSVLAIAQ WTKKVGREKHRMEAFIRFKKTKDELFLSLVRPDFNVLPLIQPHFKRRYQDQRWLIYDEQR KFGLYYDLREIHEVSLEASDVDRNLKNGMSQSFQLELDEQEVLYDQLWKDYFKSVNITER QNIKLHVQYLPKRYWRYLNEKLIEY >gi|333032474|gb|GL891952.1| GENE 79 68499 - 69761 850 420 aa, chain - ## HITS:1 COG:FN0954 KEGG:ns NR:ns ## COG: FN0954 COG4277 # Protein_GI_number: 19704289 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with the Helix-hairpin-helix motif # Organism: Fusobacterium nucleatum # 1 379 1 378 415 448 55.0 1e-126 MSDRIREKLQILADAAKYDVSCSSSGSDRKNKNKGLGDASHSGICHSYTEDGRCVSLLKI LFSNVCIFDCAYCVSRRSNDVQRAAFTVQEVVDLTINFYRRNYIEGLFLSSGIFKSADHT MERMLQVVKKLRLEENFNGYIHLKTIPGASPELIHEAGLYADRMSINLEMPTEIGLKTFA PEKSHQEVQKDLGLVRDRLIQLKDERQIIKHVPKYVPAGQTTQMVVGAHQESDQDVLFMA DKHYKEFKLKRVYFSGYIPINTENNYLPAVGSAPPLLRENRLYQSDWLMRFYGFEVNEIV NEKHPNLDLDVDPKLSWALRHPEQFPVDLNRADYQMILRVPGIGVKSAKKIVQARRFGKI HIDLLKKLGVAYQRAKFFIRCEDSPKFQKELSSSFIRQQILTQGSSKYVQQLSPQLSLGF >gi|333032474|gb|GL891952.1| GENE 80 69871 - 70287 370 138 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03318 NR:ns ## KEGG: ACICU_03318 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 138 1 138 138 241 100.0 1e-62 MLKFCCKLIVLSSLFGSPWLYAQTEADEQDEYNQCVDQTIKEMQLESINNMVVHSCSEQA KKTYEEKIVALIDQIRTQSEEYKQPERYQDILKSQRLWKAYVDQECNNAGSYIGSPMYSY CPMQEYAARVKQLEEYVN >gi|333032474|gb|GL891952.1| GENE 81 70317 - 70739 150 140 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03319 NR:ns ## KEGG: ACICU_03319 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 140 1 140 140 196 100.0 3e-49 MLQYNKKMIIHALALAPIPLLSLSALGVIILNAEFNLYSIGVVFLAHFLFYLLFYGLLVI PFVYIISYFLARKNRLNLMSIFISTTAIWILIGPITHLIFVGSFPSPWWHIYKIYSFYLM ILFTGFCYWLGLKWLSQKNK >gi|333032474|gb|GL891952.1| GENE 82 70834 - 71811 1012 325 aa, chain + ## HITS:1 COG:PA0009 KEGG:ns NR:ns ## COG: PA0009 COG0752 # Protein_GI_number: 15595207 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Pseudomonas aeruginosa # 1 312 1 312 315 564 87.0 1e-161 MSRAISHIDTFQGLILALQNYWAEQGCVVLQPYDMEMGAGTFHTATFLRALGPETWNAAY VQPSRRPKDGRYGENPNRLQHYYQFQVVLKPNPDNIQQLYLDSLKAIGIDTLTHDIRFVE DNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGVECYPVTGEITYGLERLAMYLQGVD SVYDLVWTKGQFGTVTYGDVFHQNEVEQSTYNFEYAPVDKLFELFDFYESEANRLMEAKL PLPAYEQVVKASHTFNLLDARGAISVTERQRYILRVRTLARAIAQSYVQARAELGFPMAE PHLRDEVLAQLKAQAESEAAKAEKN >gi|333032474|gb|GL891952.1| GENE 83 71811 - 73880 3012 689 aa, chain + ## HITS:1 COG:PA0008 KEGG:ns NR:ns ## COG: PA0008 COG0751 # Protein_GI_number: 15595206 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Pseudomonas aeruginosa # 1 687 1 683 684 629 53.0 1e-180 MSKHTVLFELGCEELPPKSLKTLRDALQAETVKGLNEAGLDFASVEAYAAPRRLALKIVD VDAAQADTQKRFDGPAVQAAYDAEGKPTKALEGFMRGQGITVDQLSTFQAGKVEKVCYLK DVKGQSLDALLPQILQTALDNLPIAKRMRSAASRTEFVRPVKWVVLLKDDQVIEATIQDH KAGNVTYGHRFHAPEAVTLAHANDYLAALEKAYVVANFEKRQATIQEQVKKLADEVNATA IVPADLLDEVTSLVEWPVALRATFEERYLAVPQEALITTMQDNQKYFCLINAEGKLQPYF ITVSNIESKDPTQIIEGNEKVVRPRLSDAEFFFLQDQKQPLASRKEKLANMVFQAQLGTL WDKSTRIAKLAVALSSITGANPADAEKAALLAKCDLTSELVGEFPELQGIAGTYYARIEG ENTEVSEALGEQYLPKFAGDVLPKTKTGTTIALADRLDTLVGIFGIGQAPTGSKDPFALR RSAIGILRLIIENELDVTIEELVNLALQGYGDIVKDHDKTRADAVAFLEGRYRAKYEDQG VAVDVLQAVQALAPKSPLDFDKRVNAVNHFRTLPEAAALAAANKRVANILAKEAAPEGSV IEANLVEDAEKALFAELQAVTPVVEPLLAAKDYTAALSKLAALRAPIDAFFDGVMVMADD ADLKANRLRLLAQLRNLFTAVADVSVLQG >gi|333032474|gb|GL891952.1| GENE 84 73933 - 74217 303 94 aa, chain - ## HITS:1 COG:CAP0038 KEGG:ns NR:ns ## COG: CAP0038 COG2350 # Protein_GI_number: 15004742 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 94 1 94 96 83 42.0 9e-17 MIVVTLTYKKPLAEVDAVLKEHIAFLDHYYEQKKFLASGRRENRVGGVILVLSSSIQEAE KIIKNDPFYIHDVADYDFMWFEPSKSLEEIKEFV >gi|333032474|gb|GL891952.1| GENE 85 74253 - 75155 512 300 aa, chain - ## HITS:1 COG:BS_ydfC KEGG:ns NR:ns ## COG: BS_ydfC COG0697 # Protein_GI_number: 16077603 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Bacillus subtilis # 27 279 19 271 306 138 32.0 1e-32 MAISLAAETQPPAFKLYLCIAVTVFCWGYSPIGVHSALHSYTPQHIALLRFLIASVFLLL LVMKKGIQPLKWKDVPALAVLGFFSVTLHHLLINTGQQYVTAVASSILSQSIPLFTFIIS VLLFKEQISFKKWLCILLGLCGAVLVVSGDHGFGMPSPYSLLIVLAAIAWGLYFNLYKKF ALNYDALSMMCYIIWFGTLPLLFYSAHLPNEILHATWQANMSVVLLGIFPSAMAYVLWGY VLKNMPLTIASNFLYCSPIVAMNLAVIFLNEKPSMMVLLGGVIIVGSLVWMNWGNRRTIE >gi|333032474|gb|GL891952.1| GENE 86 75264 - 76130 718 288 aa, chain + ## HITS:1 COG:YPO1503 KEGG:ns NR:ns ## COG: YPO1503 COG0583 # Protein_GI_number: 16121776 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Yersinia pestis # 1 238 1 238 289 192 42.0 5e-49 MDIAQLKMFQTVVECGTMAKASMQLHCVPSNITTRIKQLEEELGAPLFYREGKALKLTPS GEIFLDYCHKILALCDEAKRSIHPDAPPSGPLKIGAIESSATTRLPNLLAKYHQRYPEVS IQIITGTWKQLLVDISQHKLDGAIVAGNIEFPMLNKLSIYQEDMVLIASHSLGEIHCQED LIGKEIFMWTEGCPYRAALEEWLKLKNISLPITSITSYATIIGCVSAGSGVALVPKSIYE QYKNLAHIQSYKFEYLAFMQNHFFWHKNVSNHKARDMFIELIKSEFCL >gi|333032474|gb|GL891952.1| GENE 87 76279 - 76698 451 139 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03325 NR:ns ## KEGG: ACICU_03325 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 139 1 139 139 204 100.0 7e-52 MKAIKILCITSSILVSSSLFAETPQPQQVNEATSKTMPYGDNPSLGRVLLYKTGKGIQNL GDSIQGASEKTSNKISEKWKDTKEFTAEKAEVVQQKTDTAKVFTEQKIEQAKQNITSSRN GENIPIEQGELSKSSTTAN >gi|333032474|gb|GL891952.1| GENE 88 76793 - 77224 378 143 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000385 NR:ns ## KEGG: ABBFA_000385 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 143 1 143 143 246 100.0 2e-64 MNSQKLLFSTLCCLALTACATTAPLSSYPQAQVLEQDTNIEAYPTTTGNVAKLIKHDKQA CMIEFTGYLGGGQVTEHWIFNNKGLISAQSFTEQYPDSSGILSQATNSTTKSSTTFNIQD PEIQNNFKKLQSNFSKDNLAKCD >gi|333032474|gb|GL891952.1| GENE 89 77323 - 78678 1278 451 aa, chain - ## HITS:1 COG:SPAC1006.01 KEGG:ns NR:ns ## COG: SPAC1006.01 COG1404 # Protein_GI_number: 19115760 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Schizosaccharomyces pombe # 122 400 144 405 451 86 27.0 8e-17 MQSKTLFLLGLCTIFSTTASALPLDSKGAKQRLSQAAKQKVFQGKIDLDALVSNDSNDLI VEYNIPSSSVPSGLERRSYIATNKKNLQTRFNRAGGVQVLRDYNNLPLAFYRISNREALV ALLNDPNVKAVYPNRINRTTTTESLPLINQPQANTNGFTGEGSSVAVLDTGVNYLHSDFG CTAVNTPSSTCRVVYSFDSAPDDGTLDDDGHGSNVSAIVSKVATKTKIIGIDVFRKVRSQ GKWVSTAYDSDILAGINWAVNNAQTYNIKAVNLSLGVPGVKYTSECSDSSYGTAFANARA AGVVPVVASGNDAFPDGISSPACVAGAVRVGAVYDSNIGGVSWGNPVKCSDPTTAADKVA CFSNGGSLVTLLAPGAMITAGGYTMGGTSQATPHVAGAIALLRANSVSPTESIDQTISRL KATGKPITDSRTGLVFPRIDLLAATNGLTVN >gi|333032474|gb|GL891952.1| GENE 90 78714 - 79022 270 102 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03328 NR:ns ## KEGG: ACICU_03328 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 102 1 102 102 157 100.0 1e-37 MKIIASLLVIVGLIAVVLYFKPTSGASDVFNSALHETNSPQTDTSSSLSKLKEPTQLKNV SLNSNHSQPVSADAVPFYDTKSDPSIQPIDPEKDPANEIKAK >gi|333032474|gb|GL891952.1| GENE 91 79615 - 80376 950 253 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0357 NR:ns ## KEGG: ABAYE0357 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 253 16 268 268 237 99.0 4e-61 MKMMKTAIVTASVLASASIFAQSAGVNAGASAQVNVQPGGLVSGVANTVKNTAHTVGNTA KHAGHVAADTTVKATKKTTGKVTELSSKAATGTKHVASEAVTGTKHFATEAATGTKNLAT KAATGTKNLAVEAKADTKAHLDAVKTKVAEKQADQKEFTAEKQADAQARVDAVKARVAQN QAEQKEFVADTKADAQAKLNTAQPAHGVNAQTGVNVGVNVAGINANANVNAGAQASTQKG EKKSFIKGLFGTN >gi|333032474|gb|GL891952.1| GENE 92 80440 - 81414 999 324 aa, chain - ## HITS:1 COG:YPO1966 KEGG:ns NR:ns ## COG: YPO1966 COG2988 # Protein_GI_number: 16122212 # Func_class: E Amino acid transport and metabolism # Function: Succinylglutamate desuccinylase # Organism: Yersinia pestis # 1 322 1 321 330 342 50.0 4e-94 MQDFLALTLQGEQPATREGKQANFSWRWLGEGLLECTPHAQYDKAVVLSAGVHGNETAPI ELLSHLCTVLFAGRLKLAVRLLLVLGNPYAMRQGKRYVHDDVNRMFCGGYKNLPVTEESK RAEVLEQTVATFFQESSSQAKRYHYDLHTAIRASLLPTFALFPYQTHSYDADLTASLEAA DLDALVYHNAVGKTFTHFTSENFKAASATLELGKALPFGQNDLSQFASIDEVIRNVVSEQ ALPVRNKPKIRVFQVSDSLIKRDEEFHMNLSAEAPNFSTFTKGEIIATQPSGNYVVEQDQ VWILFPNPNVKIGLRAGLVLTETI >gi|333032474|gb|GL891952.1| GENE 93 81427 - 82770 1675 447 aa, chain - ## HITS:1 COG:YPO1965 KEGG:ns NR:ns ## COG: YPO1965 COG3724 # Protein_GI_number: 16122211 # Func_class: E Amino acid transport and metabolism # Function: Succinylarginine dihydrolase # Organism: Yersinia pestis # 1 447 1 446 447 590 67.0 1e-168 MKGYEVNFDGLVGPTHHYAGLSFGNEASTKNRNNLSNPKLAAKQGLLKMKALADMGMKQG VLAPHERPHVPMLRRLGFTGDDISVVAQAMRYSPELLSSLSSASPMWTANAATVSPSADS QDERVHFTAANLNNKFHRSIEAETTSQVLQAIFKNERHFVHHEALPQVALFGDEGAANHN RLGGDYAKRGIQVFVYGQQHLNNGLPGPKRYPARQTREASEAIARLHRLDDAHTVFVQQN PDVIDQGVFHNDVIAVSNQQVLFHHQHAFLNQDQAFAEIRQKMASIGEDFISIEVPENRV TVDDAVATYLFNSQILTRPDGGMTIVVPEESRQNAAVWSYLNDMIQMGTPIDAIQVYDLR ESMRNGGGPACLRLRVALNETELNAVNPKVLMNDQLFMTLNQWVDKHYRDRLAQEDLADP HLLMESRMALDELTKILGLGSVYPFQK >gi|333032474|gb|GL891952.1| GENE 94 82788 - 84257 1641 489 aa, chain - ## HITS:1 COG:astD KEGG:ns NR:ns ## COG: astD COG1012 # Protein_GI_number: 16129700 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli K12 # 4 486 2 484 492 686 68.0 0 MSNSLFINGVWLQGSGTTFVKTNPVDNQTVWSGAEATASDVEKACQAARTAFPAWARLPF AERVAIVEKFAALLEENKKHLAEVISQETSKPFWETLTEVQSMIGKVAISIRAYHQRTGE SSTEMADGVASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWTAE ETVKLWQQAGLPNGVMNLVQGGRTTGEALAASHEIDGLLFTGSANTGYHLHKQMAGAPEK ILALEMGGNNALIIDEIENMDAVVNLTIQSAFVSAGQRCTCARRILVKNSAQGDAFIQRF VEVAKNLKVGRWNDEQQPFMGGVISSAAATNMMNAQQKLLELGAKSLLPMTRPQEDSSLL TPGIIDVTGVAGIPDEEYFGPLTTIQRYDSFDEALKIANATRFGLSVGLVSPKRELFDDL LIEARAGIVNWNKPLTGASSAAPFGGVGASGNHRASAFYAADYCAWPMASLESESLTLPE KLSPGIVLP >gi|333032474|gb|GL891952.1| GENE 95 84257 - 85288 1054 343 aa, chain - ## HITS:1 COG:YPO1963 KEGG:ns NR:ns ## COG: YPO1963 COG3138 # Protein_GI_number: 16122209 # Func_class: E Amino acid transport and metabolism # Function: Arginine/ornithine N-succinyltransferase beta subunit # Organism: Yersinia pestis # 1 337 1 343 350 450 63.0 1e-126 MMIVRHAEFRDLEDIYKLAGKSGVGLTSLPQNMDTLSARISRTRNTLNGNVHKSEQGYLF VLEDTEAQRVIGVSAIEVAVGLIEPWYNFHVGTQVHASKALNVYKSLPTLFLSNDRTGSS ELCTLFLDPERRENQNGKFLSKIRFMFIAAFKQYFEKKLIAEMRGYSDENGCSPFWDAIG HHFFNMDFSTADYLSGIGQKVFIAELMPRFPVYVDLLPKDAQEVIGKMHPHTLPAYHVLE SEGLRYQGYVDIFDAGPTIEANIDELRAVKESQLLNVKITNEATVGKTQYLVANDNYHDY RAMLLKLDLVDNTLNLTHEQAEKLGVQEGHAVRVLSLNPMEVS >gi|333032474|gb|GL891952.1| GENE 96 85307 - 85729 602 140 aa, chain - ## HITS:1 COG:YPO1962 KEGG:ns NR:ns ## COG: YPO1962 COG4992 # Protein_GI_number: 16122208 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Yersinia pestis # 1 140 271 410 414 171 60.0 3e-43 MLTTDKFAPHFSVGTHGTTYGGNPLASAVAGAVFEFINTPEVLEGVKHRHQYFLDALNTL NAEYQVFDEIRGQGLLIGCVLKAEYAGKAKDITTWAGEEGLLALIAGPNVVRFTPSLIIP EQDIDEGIARLKRALAKLAK Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:46:02 2011 Seq name: gi|333032473|gb|GL891953.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld542, whole genome shotgun sequence Length of sequence - 69319 bp Number of predicted genes - 48, with homology - 48 Number of transcription units - 36, operones - 11 average op.length - 2.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 5628 6535 ## ACICU_02938 hemolysin-type calcium-binding domain-containing protein + Term 5644 - 5690 11.6 + Prom 5671 - 5730 8.0 2 2 Tu 1 . + CDS 5777 - 6982 980 ## ACICU_02937 hypothetical protein + Prom 7010 - 7069 80.4 3 3 Op 1 . + CDS 7097 - 7570 340 ## ABBFA_000778 hypothetical protein 4 3 Op 2 . + CDS 7567 - 9291 1156 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) - Term 9052 - 9089 0.2 5 4 Tu 1 . - CDS 9288 - 10004 533 ## ABAYE0795 metalloprotease - Prom 10047 - 10106 6.1 + Prom 9990 - 10049 7.3 6 5 Tu 1 . + CDS 10074 - 10415 364 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase + Term 10432 - 10473 0.2 - Term 10419 - 10461 4.2 7 6 Tu 1 . - CDS 10471 - 10908 615 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 10941 - 11000 4.4 8 7 Op 1 . - CDS 11031 - 11663 518 ## COG0110 Acetyltransferase (isoleucine patch superfamily) - Term 11695 - 11729 3.6 9 7 Op 2 3/0.091 - CDS 11742 - 12218 692 ## COG0782 Transcription elongation factor - Prom 12240 - 12299 3.2 - Term 12248 - 12296 9.2 10 8 Op 1 24/0.000 - CDS 12306 - 15536 3974 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 11 8 Op 2 . - CDS 15551 - 16690 1309 ## COG0505 Carbamoylphosphate synthase small subunit - Prom 16799 - 16858 7.2 + Prom 16870 - 16929 5.2 12 9 Tu 1 . + CDS 17004 - 17591 755 ## ABBFA_000788 hypothetical protein + Term 17613 - 17658 6.6 - Term 17609 - 17639 1.2 13 10 Op 1 . - CDS 17651 - 18187 449 ## ABAYE0803 hypothetical protein 14 10 Op 2 . - CDS 18202 - 18525 523 ## PROTEIN SUPPORTED gi|169632636|ref|YP_001706372.1| putative RNA-binding protein - Prom 18546 - 18605 5.0 + Prom 18615 - 18674 4.1 15 11 Op 1 13/0.000 + CDS 18725 - 19375 633 ## COG0293 23S rRNA methylase + Prom 19391 - 19450 3.7 16 11 Op 2 7/0.091 + CDS 19510 - 21405 1581 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 21415 - 21456 8.3 + Prom 21407 - 21466 4.8 17 12 Tu 1 . + CDS 21537 - 22388 898 ## COG0294 Dihydropteroate synthase and related enzymes + Prom 22438 - 22497 3.6 18 13 Tu 1 . + CDS 22523 - 22837 367 ## ABAYE0808 hypothetical protein 19 14 Tu 1 . - CDS 22838 - 23203 179 ## ACICU_02921 hypothetical protein - TRNA 23258 - 23343 71.0 # Leu TAA 0 0 + Prom 23388 - 23447 3.2 20 15 Tu 1 . + CDS 23540 - 25303 1858 ## COG3540 Phosphodiesterase/alkaline phosphatase D + Term 25319 - 25352 2.2 - TRNA 25427 - 25500 59.6 # Cys GCA 0 0 21 16 Tu 1 . + CDS 25653 - 26501 1151 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Prom 26662 - 26721 2.7 22 17 Tu 1 . + CDS 26742 - 27410 1177 ## PROTEIN SUPPORTED gi|169794976|ref|YP_001712769.1| hypothetical protein ABAYE0813 - Term 27391 - 27420 -0.3 23 18 Tu 1 . - CDS 27433 - 27855 535 ## ABBFA_000802 hypothetical protein - Prom 27886 - 27945 3.2 - Term 27914 - 27961 8.3 24 19 Tu 1 . - CDS 27972 - 29291 1143 ## COG0477 Permeases of the major facilitator superfamily 25 20 Tu 1 5/0.091 + CDS 29678 - 31186 1429 ## COG0554 Glycerol kinase + Term 31215 - 31283 1.0 + Prom 31254 - 31313 9.2 26 21 Tu 1 . + CDS 31341 - 32858 1243 ## COG0578 Glycerol-3-phosphate dehydrogenase + Term 32866 - 32896 1.0 - Term 32835 - 32895 6.5 27 22 Tu 1 . - CDS 32900 - 34732 2180 ## COG1274 Phosphoenolpyruvate carboxykinase (GTP) - Prom 34811 - 34870 11.8 + Prom 34930 - 34989 7.6 28 23 Op 1 2/0.091 + CDS 35124 - 36062 707 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 29 23 Op 2 . + CDS 36043 - 36801 436 ## COG1409 Predicted phosphohydrolases + Prom 36911 - 36970 11.5 30 24 Op 1 . + CDS 37123 - 38370 1101 ## ABAYE0821 hypothetical protein 31 24 Op 2 . + CDS 38424 - 42002 3527 ## ACICU_02910 putative surface adhesion protein 32 24 Op 3 . + CDS 42031 - 46758 4281 ## COG1404 Subtilisin-like serine proteases + Term 46778 - 46817 7.0 + Prom 46819 - 46878 7.3 33 25 Op 1 41/0.000 + CDS 46987 - 47289 544 ## COG0234 Co-chaperonin GroES (HSP10) 34 25 Op 2 . + CDS 47348 - 48982 2102 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 49012 - 49041 2.1 - Term 49000 - 49029 2.1 35 26 Tu 1 . - CDS 49158 - 49532 274 ## COG0818 Diacylglycerol kinase - Prom 49553 - 49612 7.2 + Prom 49519 - 49578 4.6 36 27 Tu 1 . + CDS 49639 - 50601 941 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 50608 - 50639 2.1 - Term 50587 - 50634 9.5 37 28 Tu 1 . - CDS 50646 - 51788 1221 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 52029 - 52088 5.5 + Prom 51907 - 51966 5.7 38 29 Op 1 . + CDS 52052 - 55147 2821 ## COG0841 Cation/multidrug efflux pump 39 29 Op 2 . + CDS 55220 - 55795 556 ## ACICU_02903 hypothetical protein + Term 55804 - 55839 6.0 - Term 55792 - 55827 6.0 40 30 Op 1 . - CDS 55845 - 56750 1227 ## COG0501 Zn-dependent protease with chaperone function - Prom 56786 - 56845 6.8 - Term 56888 - 56922 0.4 41 30 Op 2 . - CDS 57008 - 57871 718 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) - Prom 58018 - 58077 11.9 + Prom 58287 - 58346 6.8 42 31 Op 1 . + CDS 58375 - 59280 1034 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control + Term 59304 - 59337 1.0 + Prom 59337 - 59396 3.9 43 31 Op 2 . + CDS 59487 - 59870 505 ## ABBFA_000821 hypothetical protein + Term 59889 - 59931 9.0 - Term 59872 - 59923 9.6 44 32 Tu 1 . - CDS 59962 - 61074 911 ## COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein - Prom 61266 - 61325 6.3 + Prom 61262 - 61321 7.4 45 33 Tu 1 . + CDS 61447 - 61941 581 ## COG0782 Transcription elongation factor + Term 62075 - 62134 19.1 + TRNA 62031 - 62120 65.8 # Ser TGA 0 0 - Term 62120 - 62154 3.6 46 34 Tu 1 . - CDS 62200 - 62559 385 ## ACICU_02896 hypothetical protein - Prom 62662 - 62721 4.9 + Prom 63113 - 63172 8.3 47 35 Tu 1 . + CDS 63338 - 67336 4395 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins + Term 67358 - 67389 2.5 48 36 Tu 1 . + CDS 67797 - 68882 563 ## ACICU_02894 hypothetical protein + Term 68925 - 68978 3.3 Predicted protein(s) >gi|333032473|gb|GL891953.1| GENE 1 1 - 5628 6535 1875 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02938 NR:ns ## KEGG: ACICU_02938 # Name: not_defined # Def: hemolysin-type calcium-binding domain-containing protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 1875 265 2139 2139 2865 99.0 0 NVDVADADVTVTLDVTPPDITTTVLAIDPVTADNILDATEAGGTVTLTGTLTNVPADATT TGVVVTINGNDYTATVDAIAGTWTVNVAGNDLALDPDLTVDAKATFTDLAGNSSTLQDTQ TYTLAGSITAFDNTDHAVLSPKPALVGDDVSLGSTSYLVLTSVAGLDLQLGGNSLGFTVD AGHEGDVTFQYSGLIDAAVLSDYKLVVQKFNTTTNQWESIHGDANSSLISLHLLGIGTGN VPGAVLDGLDAGQYRAFLAYDGLLGLGVLGTLSATMDDYDLSVAGGYEIGNAEGNVITDP DPTTGQVDQVTANTYVSSVNGHPIDADGETFAGTYGTITFYQDGSYVYVPNADGSGVGQT DVFTYTLTDSVTGATGQANLNIVFDSIRAADNLVEVELNPQYQLVGTETDSAFYGVLLNV GNIVDLQLLTVDTVDFTIGAGQEGVATFNFNSLIGASALGDYNVVLQKYNDVTGQWEAVN GTGDRSLLNLTLLGNTPTAQIGGLTEGEYRAFLSFNGLVGGAVAVTLNGSVDVYNPAVIT GYDVVAAHGNLISDPNTNGDVDIATPNSIISEVNGVAVSASPTEIIGTHGTLLIYANGDY TYTPNADSAGLGQVDQFTYTLLDPASNITSQATFYVHLDSKVVDMNWDAADPSQPATVTI TAVDDAVNAAIAAEPHLIEDDRALGSATYLALLSLAGINLQAPLPFVNSTVEFNVGAGET GTATFKYSSLINEGALGDYQLVVQKFNTATNRWESITGSSEASLLNLSVLGIGVNATPGV VVEGLDEGQYRAFMTYNGLYGKSILGTLSGTMDVYDPNQIDFTGLASEGNVITGLGVGTN ADAVTGYTIVDSVTVNGVTTNVDPNTGTIIQGQYGTLQIFANGDYIYTPNNTNANLGLVD HFTYTLADPLGGNISASLDFTIGNSTPVIAVDDLAVAVVNPEYLQIGNDVAVDSYLYVAL LSLTDNFDFQLGGQGVDFTLTDSTLNDVTFNYSALIDASLLADYVLVVQKFDTATNQWVA VNGTGEADLLSLAAFGGNSVTLEGLAAGQYRAYMTYAGSGVGVSLLGTLSVQKDVFDATN ITGYSTQVAEGNVIHDVGLNGHADTASGFSTVTSVEFNGTAFAVNATGVTTIVGDHGTLS IYANGNYSYQPNGEAASLGQVDQFTYTLSDGLNTSQATLYLHIDSDAVDMTWNTSDPSQP AVITVTPVDAIDNVVSAGVDIVPQGELGVAVGSATYLALVGITEDLNVSLLGTPSVAFTI DAGHEADVTFAYAPVLSLSLFNDYKVVLQQKGADGAWHNIDGGSSTGLLNIGLLGNGGIG VTVPDLGQGEYRAFMVYTGLGVGILGTMSVVKDDFDYTVAPTNTAVVADGNVLTDDVTTL TTQVTTVTSEVVGALPQTVGTDTVINGAYGTLVISTNGHYTYTPNTTDLSAIGKVDSFTY TIRDVLTGATDTATLHVQVGSPDVTIAWDAANPANDGVVQLTANPDHVVTTTDFSNAADL PVDVASPVVSVNLIGSNSVVSDQFVVGAGTVANIDLSAVYTAQPLASVLPTVSYVIQSWN GTAWVNTIYSGSQTALGSVATIQAGSVAFQDTVEHLAAGTYRVQYTLTGVSLGATSLDTN VSTTTVHLDTYRSDWISGNVLAGDNIGGVADTGILSHEGAKLQVWDNAQNAYVDAVGQTI NTGNGVLIMQSNGEYEYRPNDVTTTTQLASTDSINYKIVSVTGGVESQSTLTIDLTHTDY NLLYTSTSANDTFTTGTGSDTVIYQLLNGTAATANNGANTGGNGVDTWTDFHVGNVATDK QADLIDIRALLDGDQTDANIGQYLNVTTSGGNTTIQIDRDGLSGLIPGNNFTTLLVLQGV TTTETELLNNGQILY >gi|333032473|gb|GL891953.1| GENE 2 5777 - 6982 980 401 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02937 NR:ns ## KEGG: ACICU_02937 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 399 1 399 551 782 99.0 0 MAVFLDFKRQLKLWLEHIVHHVSDLQEETILFISFGPKDHRCSVWHSEKTVLTQATLQLF DFIDDQFSPDQLPDYIKIDVAYNLEKQSWNQIEQQVHHQFHNNHYRRGIGFDDSCSLAFL EQEIYGKAIIRGLSYDKPNFFDETNLNYAIKQKYRATKPEIKLKSLQEVWTFDTYATFYE NGQFINLASRYDANGIRAIASNKKQHFRDLIEKNAAFLHSQIQENGKFIYGYFPAYDRDI RNYNTVRHCTSLYALLETFEVQDKPEYWPKIVAAIQYALTTFYKEKDPITAFMIDGKEGE LEIKLGANAAAILMLTKYQEITGKDDYLKYAEKLAHGILELVDPDGLTTHVLNYPNYDLK EKFRIIYYDGEAALALLRLYQINQDKRLLDTVKLMFENLAS >gi|333032473|gb|GL891953.1| GENE 3 7097 - 7570 340 157 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000778 NR:ns ## KEGG: ABBFA_000778 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 157 395 551 551 308 100.0 4e-83 MFENFIHKRYEKYHDHWLSYCTNELTKICPEEKYFIFGLNNYLKHFIFIRNRKTTYATLL EMLMAAYKMVNRLKEQGHNALFEQAYMSELKKLITFRAEFQTTGFFYPEIAMYMARPDKI LHAFYVRHDRFRVRIDDQEHNLSGYIAYVKDFEGGEI >gi|333032473|gb|GL891953.1| GENE 4 7567 - 9291 1156 574 aa, chain + ## HITS:1 COG:BS_ywtB KEGG:ns NR:ns ## COG: BS_ywtB COG2843 # Protein_GI_number: 16080641 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Bacillus subtilis # 229 504 50 310 380 90 26.0 6e-18 MTYPLFEIKLLTALDHAQFEEAIWAFEIDGDISTLLLIDYALEQFHQKKVQADEVYRVPE QKIKKIGEQNLGLEKNESYTFAELLQFLIFTQANDVKDALSNMLFGSIEQTQLILFKRAE DYQLALRAPNQLKNLFLLVKHIYSYPAELKKLFFIRTLSFKNKVYQPITPLLAHPVLTSV LYISHTFRQIYITYSEHNRSIGFFSFLDDIHRLEHMVPYYHYFQEGHVEAKKYSSQTGII NILGDTYFGEMYTEKRKSRGQTDALQQYGYHYSFEKIQPFLGKNDINIANFEAVFSLENQ SPLKDKKPFVLKADAKKTLEEFKSIHLNYLVLANNHLKDYGEQGLAYTLHQLDQASISYI GAGLNQKDAHNYFEITFETKHYAIFNGYWHRDTAYLDYDFYALGSRSGVACLNGVLLEQI MRYKQAHPERKIIVICHWGVDFKPITKDQTKLATILTQAGADLIVGHGAHTIQPIQIINQ KPVVFNIGNAVFNSDGEYEQQNALPFGCIARLDLAKDIIRLYPIYTNNLQTFWQPYPVDA EDFSKASIYMTSLLTPENYMASQDKLGRYLEVKF >gi|333032473|gb|GL891953.1| GENE 5 9288 - 10004 533 238 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0795 NR:ns ## KEGG: ABAYE0795 # Name: not_defined # Def: metalloprotease # Organism: A.baumannii_AYE # Pathway: not_defined # 1 238 8 245 245 483 100.0 1e-135 MKKILLLISGTLLCVSCTTRPPLLSERGPSISADGRPIVPVTFVFTTNTPQATKFDNYQQ MRKEIKILNKYYVDDKNNKIFKFKLHRYIPYEEFSKLHCDLKQQINQPYPISTETIPASV NTCFPKRTASKEVIVFIYDAYSTKWKFEDVTSRAFRNNGKPFILLDWNRLNYNIQAGSVH EMGHVFGLKHVCAPKATKRTPTNIMTSAECKLGSGGLRNLGFTPVQLQTILSTYNQYP >gi|333032473|gb|GL891953.1| GENE 6 10074 - 10415 364 113 aa, chain + ## HITS:1 COG:SPAC1250.04c KEGG:ns NR:ns ## COG: SPAC1250.04c COG3695 # Protein_GI_number: 19115770 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Schizosaccharomyces pombe # 14 113 5 108 108 92 42.0 2e-19 MSTFMDSILTTQYELHRQILEVIALIPYGKVATYGQVARMAGLPKHARLVGYVLKHLEAD HQVPWHRVINSQGKISLSKFNEKGENIQQLKLETEGIYLLNGKVNLKQFAWQP >gi|333032473|gb|GL891953.1| GENE 7 10471 - 10908 615 145 aa, chain - ## HITS:1 COG:MJ0531 KEGG:ns NR:ns ## COG: MJ0531 COG0589 # Protein_GI_number: 15668711 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Methanococcus jannaschii # 2 145 25 165 170 85 34.0 2e-17 MLYQHILVPIDGSETSMVAMKEAIKIGKALNSKITVVQVMALDPIIADLYVKTGQTNELI ERTRTYLLDILEQAKQQFLQEGLSVETKLLEGFVVHEEIIQAAQELNADLIVMGSHGRTG VRKLVLGSVAQKVLGESHIPVLIVR >gi|333032473|gb|GL891953.1| GENE 8 11031 - 11663 518 210 aa, chain - ## HITS:1 COG:VCA0253 KEGG:ns NR:ns ## COG: VCA0253 COG0110 # Protein_GI_number: 15601021 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Vibrio cholerae # 7 210 16 226 232 211 50.0 6e-55 MDTPLINTPVRHWCEFEFISKTVKNPNIHIKGNYSYYSAYWDQGFERCVVRYLHDKPSTP DKPIDQLYIGNFVCFGAECVIMMGGNQLHRPDWISTFPFDTRSFLAAGDTIIADGCWIGS RAMIMQGVKIGEGAVVATGAVVTKDVPPYTIVGGVPAKIIKYRFPQEQIEKLLALKIYDL DEKQVLKMREYLQTDDIDALTAHLKKLQSE >gi|333032473|gb|GL891953.1| GENE 9 11742 - 12218 692 158 aa, chain - ## HITS:1 COG:STM3299 KEGG:ns NR:ns ## COG: STM3299 COG0782 # Protein_GI_number: 16766595 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Salmonella typhimurium LT2 # 1 158 1 158 158 201 70.0 3e-52 MQRYPMTPEGKIALEKELQHLKTVERPRITQAIAEAREHGDLKENAEYHAAREQQGFCEG RIQDIEGKLGAAQVIDVKDLEQNGRVVFGVTVTIENLDTEERKTYKIVGDDEADFKINKI SVNSPIARGLLGKNEGDEVKITTPQGEVEYEVVSVEYL >gi|333032473|gb|GL891953.1| GENE 10 12306 - 15536 3974 1076 aa, chain - ## HITS:1 COG:PA4756 KEGG:ns NR:ns ## COG: PA4756 COG0458 # Protein_GI_number: 15599950 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Pseudomonas aeruginosa # 1 1076 1 1070 1073 1636 75.0 0 MPKRTDIKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPSM ADATYIEPITWQTVAQIIEKERPDAVLPTMGGQTALNCALALDENGVLEKYGVELIGATK EAIEKAEDRKLFDEAMRKIGLECPKAAIAETMEEALEIQSRFGFPVIIRPSFTMGGSGGG IAYNREEFLEICERGFDLSPTHQLLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM GVHTGDSITVAPAQTLTDKEYQLMRNASVAVLREIGVETGGSNVQFGINPKDGRMVVIEM NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGVTPASFEPSIDYVVTKIP RFNFEKFPQAEPVLTTQMKSVGEVMAIGRNFQESVQKALRGLEVGVSGFDEKVEAGATNV KETILKELKVPGPERIWYVADAFRHGFSLDDVFEATKIDRWFLIQIQDIVNTEAQVKTLG FGDLTAENIRSFKRKGLSDLRIANLMGISQKQFRKQRWNLGVYPVYKRVDTCAAEFESGT AYMYSTYDEECEANPSNRDKIMVIGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRTEKPKGVIVQYGGQTPLKLARALEEAGTPI IGTSPDAIDRAEDRERFQQMIQRLQLRQPNNSIVKSAEEGISEAAKVGYPLVVRPSYVLG GRAMEIVYNEDELKRYLREAVQASNEAPVLLDHFLDDATEVDVDCVSDGKDVVIGGIMQH IEQAGIHSGDSACSIPPYSLSKEIQDEMRRQTIAMAKELGVVGLMNVQFAVKGNDIYVLE VNPRASRTVPFVSKCIGESLAKVAARCMAGQSLESQGFTKEIIPNRFAVKEAVFPFAKFP GVDPMLGPEMKSTGEVMGVGQTFGEAFYKAVLGSNDRLPGLPTEGEVKHAFLSVRESDKK YIADIAKKLVEYGFKLVATGGTYQVLKEAGLECESVNKVTEGRPHIVDRLKNGEIHLIVN TTEGKQAQYDSAMIRRAALQGKVYYTTTINGAEAVCQAFAVKLPMDVYRLQDLTVG >gi|333032473|gb|GL891953.1| GENE 11 15551 - 16690 1309 379 aa, chain - ## HITS:1 COG:VC2390 KEGG:ns NR:ns ## COG: VC2390 COG0505 # Protein_GI_number: 15642387 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Vibrio cholerae # 1 375 1 375 379 566 72.0 1e-161 MSTPAILALADGTIFKGTSIGATGSTTGEVVFNTAMTGYQEILTDPSYAQQIVTLTYPHI GNTGCNEEDVESGRIHKVWANGLIIRDLPLLHSNFRSEQSLSEYLQAHNVVAIADIDTRK LTRILRDKGAQNGCILAGENITEEEAIAKARAFGGLNGLDLAKECCDPTGFEWSEGSWVL GKGFTQPELKYHVVAYDYGVKTNILRMLADRGCKLTVVPAETPAEKVLALNPDGVFLSNG PGDPAACDYAIEAVKTIVETTTLPVFGICLGHQILALASGAKTVKMNHGHHGANHPVQNL EDGTVMITSQNHGFAVDAETLPANLKATHKSLFDGTLQGIHRTDKPAFSFQGHPEASPGP HDCAPLFDHFIELIEASKQ >gi|333032473|gb|GL891953.1| GENE 12 17004 - 17591 755 195 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000788 NR:ns ## KEGG: ABBFA_000788 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 195 1 195 195 195 100.0 7e-49 MSDNQVSKDIAENTSSVAETVKTEVAEAKEAVAKTTTRAKKAVSTKATQVKEVVAEKTEQ VKEVAHEATSQVKEAIAETQEQVKAVINETEEKIEAETQELNQNIHNQFAQIKQDILQRL DVIKAQFNTSQEGLNELKNTLKAEINALIEDLTKVTKELKGDISQISLKHKDSLTESLKR TKNNAVEAWNKARDH >gi|333032473|gb|GL891953.1| GENE 13 17651 - 18187 449 178 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0803 NR:ns ## KEGG: ABAYE0803 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 178 1 178 178 351 100.0 9e-96 MASYELSAFDRFHAVSVVGAIEQQAPYTLNVGFWIRDPNQLIIWPQEVAAHPRQDFLWEE TCFEIFIGVHDEDFYREINLSPSQAWQTYQFEEYRYPESMPPLVAYDIELNHLKRTHYGL NVSLDLSQFMQQHRLKWANLYLGLTAVLKTKDGMQYYAMQHSGKHADFHNKRDWLHEF >gi|333032473|gb|GL891953.1| GENE 14 18202 - 18525 523 107 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632636|ref|YP_001706372.1| putative RNA-binding protein [Acinetobacter baumannii SDF] # 1 107 1 107 107 206 100 4e-52 MAALSIHERKRLRQIGHVLNPVVMIGGQGLTDAVIEETLRALNDHELIKVKIAGEDREAR AAVIDAIVEATGAEAVQKIGKIVLLYKKAAKQNQHLSNLVRHAHLAN >gi|333032473|gb|GL891953.1| GENE 15 18725 - 19375 633 216 aa, chain + ## HITS:1 COG:PA4752 KEGG:ns NR:ns ## COG: PA4752 COG0293 # Protein_GI_number: 15599946 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 23S rRNA methylase # Organism: Pseudomonas aeruginosa # 11 210 4 203 207 259 59.0 3e-69 MATRITNQKLSKSSRAWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVV DLGAAPGSWSQIAGKLVGSKGLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNILNGR QVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDEFRK QVVDSFDVLKTAKPAASRARSKEVFLVGQGRKKALQ >gi|333032473|gb|GL891953.1| GENE 16 19510 - 21405 1581 631 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 6 597 6 597 636 613 54 1e-175 MSDYFKNAVLWLIILGVLILIFSNISDRNKPTAMKYSDFVAAVNAGQIKQVTIDGLNISG EKTNGSQFETVRPQVEDTELMPSLNKQNVVVEGTAPQRQGILMQLLIASFPVLLIILLFM FFMRNMGGGAGGKNGPMSFGKSKAKMLSEDQIKVTFADVAGCDEAKQEVVEIVDFLKDPA KFKRLGATIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRD MFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGGHDEREQTLNQMLVEMDGFEGNEGVIVIA ATNRVDVLDKALLRPGRFDRQVMVGLPDIRGREQILNVHLKKLPSVTGVDVKVLSRGTPG FSGAQLANLVNEAALFAARRNKNTVDMHDFEDAKDKIYMGPERKSMVLREEERRATAYHE AGHAIVAEILPGTDPVHKVTIMPRGWALGVTWQLPEQDQISHYKDKMLNEIAILFGGRIA EEVFIQQQSTGASNDFERATKMARAMVTKYGMSDKMGVMVYEDENQNGFFGNVGSRTISE ATQQQVDQEVRRILDEQYKVARDILENNKDIAHAMVKALMEWETIDRDQIRDIMEGREPQ PPKVYIAENPVSAFEPPKDGPSTPPPLPAMN >gi|333032473|gb|GL891953.1| GENE 17 21537 - 22388 898 283 aa, chain + ## HITS:1 COG:HI1336 KEGG:ns NR:ns ## COG: HI1336 COG0294 # Protein_GI_number: 16273246 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Haemophilus influenzae # 18 279 10 271 275 263 51.0 2e-70 MQLISLPKQILQCGQLQLDLSQPHVMGILNVTPDSFSDGGKHNQLDQAVDHALSMIEQGA TIIDIGGESTRPGASEVVVEEEVRRVVPVVEALSHHNVILSIDTSQPEVIRAAKAAGAHI WNDVRALTRPNALKTAVELDIPVVIMHMRGEPTTMNQLDQYTDVTLDVMQELQQRIDEAL AAGVKKHNIIVDPGFGFAKNAQQNLKLLKEFWKLNELGYPILSGLSRKRFIGEALQGAPA DQRAVGSVTGHLLSIQQGASIVRAHDVKEMHEAILVWKAMQQV >gi|333032473|gb|GL891953.1| GENE 18 22523 - 22837 367 104 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0808 NR:ns ## KEGG: ABAYE0808 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 104 1 104 104 161 100.0 7e-39 MFEDLLLPMFDDEYYPDILVAELKQLIEQFAKKVQKPALAEQDIYRYAHQTVNEINEMKP QFEDLDSSLDDSAADYIAEAMMMVVQDAGYLDLEMEELVMNREW >gi|333032473|gb|GL891953.1| GENE 19 22838 - 23203 179 121 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02921 NR:ns ## KEGG: ACICU_02921 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 121 1 121 121 221 100.0 7e-57 MPDENNAMIRILIFISALLFFIPFANAKDIFNGTILFKNNDWHFVRCSITQDDYLIEAPQ EIFTQFKELQQQQKNYWVSVLAEVNEQQNGNLILKIEKIDEVHLDETCHLLDALKNFENR E >gi|333032473|gb|GL891953.1| GENE 20 23540 - 25303 1858 587 aa, chain + ## HITS:1 COG:CC0455 KEGG:ns NR:ns ## COG: CC0455 COG3540 # Protein_GI_number: 16124710 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphodiesterase/alkaline phosphatase D # Organism: Caulobacter vibrioides # 45 568 36 547 564 332 38.0 1e-90 MSEKISRRELIQKSLLGFGALSIPVAFTGCNDGSDDESPEIQADFLHGVASGDPLQDKVI LWTRVTPTDSGVRLKVVWEISTDNQFKQNLKTGMVETSKTDDFTVKVDAAGLQADTVYYY RFKFGNKVSPVGQTKTLPTSTNKVSFAVCSCSNYPAGYFYVYRELAKQNVDVIIHLGDYI YEYGADGYATEDATKLGRNLPADNNKEIIKLDDYRKRYALYRQDKDLQAAHQRHPFIVIW DDHELANDAWREGAENHQSNEGAFSDRKLAALQAYFEWMPIRPVSSTDHLNIYRQFNFGS LVQLTMLDTRIIARDKQLAYTDYMTATGLDIAKFQADLTNPVRTLMGYTQRDWLVDKLKQ STATWNVVGQQVLMSKMWIPAELLASLGQITSGGTSPEVLAKMNAQITELVALKLRLQQN DPTLTAQEKARIMMVAPYNLDAWDGYYAEREFVYDKLAEFNKKIIVLAGDTHNAWASYLY SQKGKYVGVELATSSVSSPGLEKYLSIPLAQLQQFEFAFTTLIDELVYCNLNQRGYLLVT LDQAQVHSEWRFVDSIKNTEYQIDSSRQNDIVLNLNLMPLKQGQKTA >gi|333032473|gb|GL891953.1| GENE 21 25653 - 26501 1151 282 aa, chain + ## HITS:1 COG:BH2784 KEGG:ns NR:ns ## COG: BH2784 COG0190 # Protein_GI_number: 15615347 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Bacillus halodurans # 2 279 3 279 279 269 51.0 4e-72 MALVLDGRALAKQIEENLLVRVEALKAKTGRTPILATILVGDDGASATYVRMKGNACRRV GMDSLKIELPQETTTEQLLAEIEKLNANPDVHGILLQHPVPAQIDERACFDAISLAKDVD GVTCLGFGRMAMGEAAYGSATPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQ ANATVTICHSRTQNLPELVKQADIIVGAVGKAELIQKDWIKQGAVVVDAGFHPRDGGGVG DIQLQGIEEVASAYTPVPGGVGPMTITTLIRQTVEAAEKALG >gi|333032473|gb|GL891953.1| GENE 22 26742 - 27410 1177 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169794976|ref|YP_001712769.1| hypothetical protein ABAYE0813 [Acinetobacter baumannii AYE] # 1 222 1 222 222 457 99 1e-128 MSCTFQLSKVPEHLLQALHEVIPHCELMAQQLPETPISLWLIPPVFPTDRLDDEVIRRIW NDTPYWIFCWASGLAMAQWILAEPHHVKDKVVLDFGAGSGVVAIAAKMAGAKRVICCDID QVSLNACRENALLNDVELEYLDDLYKAEQVDVLLAADVLYDQCNRFFLDEFLKFAPEVWV ADSRVKNFSHPKYEKIEERSATTWPDLDEAKEFRNVSFYKTL >gi|333032473|gb|GL891953.1| GENE 23 27433 - 27855 535 140 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000802 NR:ns ## KEGG: ABBFA_000802 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 140 1 140 140 251 100.0 5e-66 MNKSILCLALSSMFILTACQTTPRQYNGSTGYQIENQTKTSATLAYTLAGRSNQQLDERK LQRACQNVLGAQKVYKLSILSINEIPNPAKDEHYGIQLGETRASFGLSNTPSLNNGEDYA TRQALEARPSTLKVVRYTCS >gi|333032473|gb|GL891953.1| GENE 24 27972 - 29291 1143 439 aa, chain - ## HITS:1 COG:AGl1674 KEGG:ns NR:ns ## COG: AGl1674 COG0477 # Protein_GI_number: 15890953 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 438 45 476 477 591 74.0 1e-169 MVDQPSTATTPHSNLDTKTRLKSILGGSAGNLVEWYDWYVYAAFTLYFAHAFFPKGSQTA QLLQAAAIFAVGFLMRPIGAWIMGIYSDRKGRKAGLTLSVTLMCIGSLLIAVTPSYESIG VFAPLLLVIARLIQGLSVGGEYGASATYLSEMAEKDRRGFFSSFQYVTLIAGQLTALCVL LILQMILTEEQLHDWGWRVPFFIGALLAIVVFRIRRGLLETQSFKNAQAETDQPKSGMFA LFKHYPKEAFTVLFLTAGGTLAFYTYTTYLQKYLVNTSGFTKPEATQITTLALFIFMCLQ PLAGALSDRIGRKPLMIAFGVTGVLFTYILFDTLANTHNYWTAFWLCLGGLVMVTGYTSI NAVVKAELFPAHIRALGVALPYAIANTLFGGTAEFFALSFKEAGHESWFFIYVSIMIFIS LLIYIFMKDTKHHSKIKEH >gi|333032473|gb|GL891953.1| GENE 25 29678 - 31186 1429 502 aa, chain + ## HITS:1 COG:PA3582 KEGG:ns NR:ns ## COG: PA3582 COG0554 # Protein_GI_number: 15598778 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Pseudomonas aeruginosa # 6 499 7 500 505 756 73.0 0 MSNCPKKYIVAFDQGTTSSRAIVLDHDANVVSIAQREFTQIYPQPGWVEHDPMEIWATQS AVWVEALAQAGIKSEQVAAIGITNQRETTIVWDKKTGRPIYNAIVWQSRQTTEICNQLYK AGWQEYIRKTTGLVIDPYFSATKIKWILDHVEGSRERAERGELLFGTVDTWLIWKLTNGA VHVTDFTNASRTMLFDIEKLEWDEKLLQALDIPRAMLPEVRSSSEVYGYTHTISGQEVGI PIAGIAGDQQAALFGQMCVESGQAKNTYGTGCFLLMNTGKKIVRSEHGLLTTIACGASGE VNYALEGAVFNGGSCVQWLRDELKVIKNAKDSELYATRVKDNNGVYVVPAFTGLGAPYWD PTARGAIFGLTRGASIEHIIRATLESIAFQTRDVLDAMQQDAEEELRTLRVDGGVTENNF LMQFQADILATPVERPIMKETTALGAAFLAGLATGFWQDLHELRNKSAIEKVFEPKMSSE QSEMIYKGWLKAVKRSQSWAED >gi|333032473|gb|GL891953.1| GENE 26 31341 - 32858 1243 505 aa, chain + ## HITS:1 COG:PA3584 KEGG:ns NR:ns ## COG: PA3584 COG0578 # Protein_GI_number: 15598780 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Pseudomonas aeruginosa # 29 495 32 499 512 627 65.0 1e-179 MKVQPNDYSKIYDLAVIGGGINGVGIANDAAGRGLSVFLCEKDDLASHTSSASSKLIHGG LRYLEHKEFRLVREALAEREVLLAKAPHIIKPMRFIMPHRPHLRPAWLIRAGLFFYDHLG KREKLLGSNLIYFKEDSPLKPAITRGFEYSDCTVDDARLVVLNALQAKEKGAKVVTRTRC VKAYRQQELWHLELQSGAEFYQIRAKAIVNAAGPWVEEIISENLSLSSPYQIRLIQGSHI VVPKLYDCHKAFIMQNEDRRIVFAIPYLEKYTLIGTTDQEYTGDPQKVEITDVEIDYLLT VTNSHFKKQLTRADIVSQYSGVRALCDDESDNPSAITRDYTLALQAEDKTTPLLSVFGGK ITTYRKLAEAALEHLAPFFNDMAEEWTADEPLPGAENWTTLDDLINQIKTRVSGISDSLA NRWAHAYGTRVWNMLKERNAIEQLGQHFGHDLFECEVRYLCEYEWAHTAEDILWRRSKLG LAFDEKQVKVLEAYLSERRLKDDAA >gi|333032473|gb|GL891953.1| GENE 27 32900 - 34732 2180 610 aa, chain - ## HITS:1 COG:RSc0017 KEGG:ns NR:ns ## COG: RSc0017 COG1274 # Protein_GI_number: 17544736 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxykinase (GTP) # Organism: Ralstonia solanacearum # 4 602 12 616 622 879 68.0 0 MTTVNAPEFVRHPKLIAWVEEIANLTKPAKIEWCDGSEEEYQRLIDLMIANGTMQKLNQE KHPGSYLANSDPSDVARVEDRTYICSQNKEDAGATNNWEDPAVMREKLNGLFEGSMKGRT MYVVPFSMGPLGSHIAHIGIELTDSPYVAVSMRKMARMGKAVYDVLGTDGEFVPCVHTVG APLAEGQKDVAWPCNPEKYIVHYPETREIWSFGSGYGGNALLGKKCLALRIASVMGREQG WLAEHMLILGVTNPQGEKHYIAAAFPSACGKTNFAMLIPPAGYEGWKIETVGDDIAWIKP GEDGRLYAINPEAGFFGVAPGTNTKTNPNCMATLHKDVIYTNVAVTDDGQVWWEGLSKEV PANLTNWKGQPHVNGEKAAHPNARFTVAAGQCPSIDADWENPAGVPISAFIFGGRRADTV PLVSEAFDWVDGVYKAATMGSETTAAAVGQQGIVRRDPFAMLPFAGYNMADYFDHWLNLG AKVSEKAEASGNKLPKIFNVNWFRRDAEGNFVWPGFGQNMRVLEWIIDRCEGRANAVETP IGFVPTYEDLNWEGTEFTKEQFDLITNQDKDQWVTEIESHTELFNKLGERLPKALKERQA ALLEAVKTGF >gi|333032473|gb|GL891953.1| GENE 28 35124 - 36062 707 312 aa, chain + ## HITS:1 COG:mll9677 KEGG:ns NR:ns ## COG: mll9677 COG1597 # Protein_GI_number: 13488518 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Mesorhizobium loti # 2 306 165 464 480 147 30.0 2e-35 MRPLKPLSIIYNEKSGFHASKHEDVYEQLMTVFTEYGFEIQVFELNENTLFDDLINNVIH RHSQNENTGVVVAAGGDGTLNAVATKLKNTSIPMGILPLGTFNYVAKVLEIPLDLLEAAE VIATGKPRSVHVAVINDHIYLNNASLGLYPLFIKKRELYNKYLGRLPLHAYTSALDVLLR ENKSMKLSITVDGKKYPVKAPLIFFGNNQLQLCDMKLRIAECAAQGRVAGVVITKSDKLS LLNMLWQWVQGKVEDAQDVYSFCADHVIVDCAKKTKLTVALDGEIIEMKPPLNFTVEKNA LNIMVPNVTTSV >gi|333032473|gb|GL891953.1| GENE 29 36043 - 36801 436 252 aa, chain + ## HITS:1 COG:mll9676 KEGG:ns NR:ns ## COG: mll9676 COG1409 # Protein_GI_number: 13488517 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Mesorhizobium loti # 2 250 4 245 269 138 33.0 1e-32 MLLHLSDLHFGTEKKECLEAIRDFCIQQQPEVIVVSGDITQRAKYEQFFKCRQYLDSLNI PYLVVPGNHDIPLYHVWNRFFSPFTRYRYFFGELEPTLETEHFYIVGVNSIRRRYHTRGH ISIEQIQATYERLDRGPKNKIKLVVFHQPFYTPPDNKHGIKDCPVLGKIALEKWSTTGLF GMLHGHLHKTAIYDLTQIYSLKIDHPIFDIHAGTATSTRLYHHNPNSFNTISNEGKIQHY WFNYDLKIFQLI >gi|333032473|gb|GL891953.1| GENE 30 37123 - 38370 1101 415 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0821 NR:ns ## KEGG: ABAYE0821 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 410 14 423 3369 711 96.0 0 MANNASKNNTVDINVGQTKNIVVDPKVIAKIDINPEKIASITRDGNSAVIHLKDGTEIVL ENFFISENPQILLNEGQIYWAANLAEDATGQTTVNYLELKEIPKYIDASSSVPIWSWVVS ALAGAGTVALLSQQDAKDKTPPEPGKLSFQNLLDSGELTQDQITNDNKFNLKLSGQEKGS SVTYLISTDEGKTWQETTLNQKDLADGIYLYKAVVTDAAGNTSETAVQKVVVDTTAPQAG ELTLSDLNDTGVSATDQITQDQNFNLKLEGQESGSRVTYLVSTDEGKTWQETTLNQKDLA DGIYLYKAVVTDAAGNTSETAVQKVVVDTTTPHSGELTLSDLNDTGVSVTDQITQDKNFN LKLEGQETGSRVTYLVSTDEGKTWQETTVVQKDLADGIYQYKAVVTDAAGPPPHI >gi|333032473|gb|GL891953.1| GENE 31 38424 - 42002 3527 1192 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02910 NR:ns ## KEGG: ACICU_02910 # Name: not_defined # Def: putative surface adhesion protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 1189 394 1582 3169 2143 99.0 0 MADGVYKYKAVVTDAAGNTSETAVQKVVVDTTAPQAGKLTLSDLNDTGVSATDQITQDNS FTLKLVQPIVIGEQAALLDHYEVSKDEGKTWQETTADQKDLADGIYQYKAIVTDLAGNIS ESAIQKVVVDNSLNVESTTVIVKPITEDNTISLVEKDQIISIRLEIANLPTDLNSSLTSV NTTLDNVTYNFHFDEVTQEWVTEIPAEFLWSVEPQTNISIDISLTDQAGNTAIITHTQNY NVDHTPNSPTLDSLTFNNIDGAIISGSAYKGSKVDIYNKNGDWLASTITNEEGKFTLQDL SINSNQEVYAVATYNGYSSENSSIGLVTEVPAISITRISPEGVISGYATEGSHFIVKDQN GNILQEFNSNVFDSSGITPFSVMALGEVRPFILSLDQPLEEGAQIIISTDKDNISGHPQY ITADYTPAVFLETPQFDISGETLSVHVNEPNSFIRAFSGEGNLIATGFTDEQGFASLQVF QFLKEGETVTVQVVDKNQNTSETLIEVPNFAYIPHVERITQEGLISGVAEDNSTVIVRDA DGNELGKVTLGDDNSWSDFSHFSLSVNRPLIDGEKISVQIIDNKGLMSPEQNIIVDLTPP PAPTELNFNDAGDLVYGHAEPFSEILVKDGQGNILNKWFWNNWTDESGSFSIELGTFLTN AETVYVTATDVNGNVSLAAQIQAPNYAFAPYVDSFTSDGVISGQAENNSTLVVKDAKGDV VAEIKVGEDNGWNGSSYFKLQLDRPLVDGEQFFLSIKDARGQVSTDTVITADTVAPAPAS NLVFSEDGSYLTGVAELNTTIQVFDHNGQLVNIWNNTINSDGTFTIYLGSNNLHGEAFTV TVKDQAGNVSEAISINAPLDDIAPNPIKNILLDANGQNFTAQAEANSQIEVFDSLGNQTG WGSTDSAGNASGSFNQTYLHGEELTFVVIDRAGNRSIEFKQNALIDTIAPNPIENIIFNE NGQSFTAQAEAGSSIDVLDQTGNKIGFGYTDSSGNVSGYFQQVYLHGEELTFVVIDRAGN RSAEVKQSALNDDVAPNPIENIVLDLNGQNFTAQAEANSQIEIKNNNGDVVGYGSADSAG NVSGYLYQVHLHGEELTFIVVDRAGNRSTEVKQNALIDDIAPNPIENIILDINGQNFTAQ AEANTQIEVKNAVGEIVGSGYVDGAGNVSGYLYQVYLHGEELTFIVVDRLAS >gi|333032473|gb|GL891953.1| GENE 32 42031 - 46758 4281 1575 aa, chain + ## HITS:1 COG:BH2080 KEGG:ns NR:ns ## COG: BH2080 COG1404 # Protein_GI_number: 15614643 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 12 346 732 1049 1052 63 24.0 4e-09 MIDNIAPNPIENILLDANGQNFTAQAEANTQIEVKNTAGEVIGSGSTDSMGNVSGYFYQV YLHGEELTFVVVDRAGNRSTEVKQNALIDDIAPNAIENIIFNENGQNFTAQAEANSKVEV KNAAGEVVGSGYVDSAGNVSGYLNQVYLKGEELTFVVIDQAGNRSIEVKQTAFLDNTAPE NATNLVFSEDGSYLSGMAEPNATIQIFDQYGQLLNQWNNNVNWDGTFNIYLNSNYMHGEV FKVVVVDQAGNLSGEVTVKAPLDDIAPVAASDLVFNEDGSSLSGVAEPNTFIQIFDQNGQ QMNTWSQSVNADGTFTIFFGTYNLHGEEFTVIVKDLAGNVSEAVSVKAPLDDIAPNLIKN IVFDANGQSFTAQAEANSQIEIFDSFGSQIGWGSTDSTGNVTGYFYQVYLHGEELTFVVI DRVGNRSDEMKLNALMDTIAPKPIENIIFNENGQNFTAQAEANSFISVKNAAGEFVGYGY VDSTGNVSGHFNQVYLKGEELTFIVIDKAGNQSIEYKQNALTDDIAPNPIENIVLNKNGQ NFTAQAEADSQIEVKNTAGEVVGSGYVDSIGNVSGSFNQVYLHGEELTFVVVDRAGNRST EVKQNALIDDIAPNQIENIVFDVNGQYFTGHAEADTRIEVLDQFGNRAGWGYVDSQGNVI GYFNQVYLHGEELTFIVVDIAGNRSVEVKQNALIDDVAPPAAANITLTSDGLLFGEAEPN STVEIIDQYGAVITTTYVWYDGTFNQWINLSQYQTQNLSIVVKDQAGNRSEVAHQLVPVF TNSPIAATELKLDIDGHILTGKATVGMSVVVTSTDGQTINGGWNNAVNEDGSFAIQLNDY YLQGQTLQVRVYDQNTNQYSLISEIIAPLDNIAPIINDVVINNDGYSITGHTDPKVIIKV MDEDGDFRAEFQSDEAGYFNASIYPPLLRGEQLFITATDLAKNISTPFNITFNADINAPP SANHVVISENGFFIEGTALPNSVVRIYDVYSNYIGGGFVDETEHFNIQLYSPQANGQTLR VVVEQNGYQSAYTEITAPIDTVAPNAATQLVLEDGNVLSGQAEAYSTVNIFDANNNLVGQ TTVGSEGSFLTQLWSQYWHGETLTVKVVDANQNVSVSTTITATNDTTAPKVVTQLAINEW GNWLVGHAESNATLEITYYFADQEPSVTSTTVMADGTFSTYVYGTATSFDLTVIDRAGNR SETISKAINDLPTITVDQFKGDATDNTYIVDHISDFVEEYTVEPYAIYKDVWIDNSYMYP EWVSEGHYEQIWFVDGYYDSQWITSGYSTVQNVYQDQNGITYIDNGTADSDYSRYEQQYY DFVNGQWQEGYELTYIRSEEGWVDTSHNEDVYIDTSHYEDVWVDTSHYEDVWVESGYWEN QLVESGYRDFDFGGHDKIVSSVSYSLVGYSDWSTGLESGRYVEDLELVGSAHLNATGNAL DNLLTGNSGNNILNGREGNDTYITNEGTDTILFQLLNSQDATGGNGHDTVLDFTLGDIRT NLQADKIDLSELLIDYSKDVSALAKFITVEQDAGNTTISLDRDGEGTMFNSVSLLTLNQV NTTLDELLNNQQIIV >gi|333032473|gb|GL891953.1| GENE 33 46987 - 47289 544 100 aa, chain + ## HITS:1 COG:PA4386 KEGG:ns NR:ns ## COG: PA4386 COG0234 # Protein_GI_number: 15599582 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Pseudomonas aeruginosa # 8 99 3 96 97 120 75.0 5e-28 MELIMSNIRPLHDRVVIRRVEEETKTAGGILLPGSAAEKPSQGEVIAVGNGQITDNGVRA LDVKVGDKVLFGTYAGTTVKVNGEELLIMKESDILAVLEG >gi|333032473|gb|GL891953.1| GENE 34 47348 - 48982 2102 544 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 544 1 547 547 814 75 0.0 MSAKDVKFGDSARSKMIAGVNVLADAVKVTLGPKGRNVVIDRSFGAPHITKDGVTVAKEI SLKDKFENMGAQLVREVSSKTNDIAGDGTTTATVLAQAILNEGIKSVTAGMNPMDLKRGI DIAVKTVVENIRSIAKPADDFKAIEQVGSISANSDTTVGKLIAQAMEKVGKEGVITVEEG SGFEDALDVVEGMQFDRGYISPYFANKQDTLTAELENPFILLVDKKISNIRELISVLEAV AKTGKPLLIIAEDVEGEALATLVVNNMRGIIKVCAVKAPGFGDRRKAMLQDIAILTGATV ISEEVGMSLEQATLQDLGTAHKITVSKENTVIVDGAGDAAAIAERVQQIRAQIEESTSEY DREKLQERVAKLAGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGVVAGGGVALV RAVNALEGLKGANEDQTAGINILRRAIEAPLRQIVANAGDEPSVVINAVKNGEGNFGYNA ATGEYGDMLEMGILDPAKVTRSALEHAASVAGLMLTTECMITDIPEDKPAAPDMGGMGGM GGMM >gi|333032473|gb|GL891953.1| GENE 35 49158 - 49532 274 124 aa, chain - ## HITS:1 COG:PA3603 KEGG:ns NR:ns ## COG: PA3603 COG0818 # Protein_GI_number: 15598799 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Pseudomonas aeruginosa # 3 124 2 123 123 172 73.0 1e-43 MDSYSPYKGKSGLKRILNATSYSISGFKAAYQNEAAFRQIVLINLVLIPVSFFLDVTRGE HALMIIVCLFAIIVELFNSAIEAVVDRVSLEKHQLSKNAKDMGSAAQFVALSIIVATWLI ILFG >gi|333032473|gb|GL891953.1| GENE 36 49639 - 50601 941 320 aa, chain + ## HITS:1 COG:RSc2214 KEGG:ns NR:ns ## COG: RSc2214 COG0491 # Protein_GI_number: 17546933 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Ralstonia solanacearum # 27 314 46 330 339 244 40.0 2e-64 MKKLFVALGLIMGSLHISYAEPASAQQVPGYYHHQFGNYRITSLLDGTIYLDPKLFKNLS PAEKTKILTKYAAVNEKGIQTSVNAFLVDDGKSLTLVDSGAASCFGPQLGSIAKNLELAG YQLANVKTVLLTHLHPDHVCGIAQNGKAVFPNATIYAHEREADYWLNPANEKTVPADKKE NYLGTVKNVKAALAPYQAKKAFKTFKDGDVIQGFEVINTHGHTPGHHSFRLKSKGQQIVF VGDIVHSHSLQFDAPKTGVDFDVNSEQAINTRLKMFAEISNKQQWVAAPHLPFPGIGHVY KVSAEQYQWIPLYFNNSLDK >gi|333032473|gb|GL891953.1| GENE 37 50646 - 51788 1221 380 aa, chain - ## HITS:1 COG:RSc0502 KEGG:ns NR:ns ## COG: RSc0502 COG0584 # Protein_GI_number: 17545221 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Ralstonia solanacearum # 3 377 4 378 378 386 52.0 1e-107 MFRKALLCLSLISLVGCNDDDKTETTPTTPEYQLPKIVVVGHRGASALRPEHTLASYQKA IDDGADFIEPDLVSTKDGVLVARHENEIGGTTNVSTLSQFADRKKTKNIDGVDLTGWFTE DFTLSELQQLKARERIPEFRPANTAYNDLYPVPTLEQIIELAEANYKKTGKIIGLYIETK HPTYFKNQNLAMEDTLLKTLAKYKYTRDIAPVYLQSFEVQNLKDLKRELDLHKTLKHAQI IQLYDSKTSRPADFVESGDTKTYADLATAQGLKDVAKYANGVGPSKGYILTFNNDGSYKT STFIADAHTAGLKVHPYTFRPENNFLPAPLKCSPDKPAERCPSGALKEFEAYFKAGVDGV FTDDPALGREAVTNFEKAVK >gi|333032473|gb|GL891953.1| GENE 38 52052 - 55147 2821 1031 aa, chain + ## HITS:1 COG:YPO3482 KEGG:ns NR:ns ## COG: YPO3482 COG0841 # Protein_GI_number: 16123628 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Yersinia pestis # 1 1029 1 1032 1041 987 51.0 0 MLSKFFIQRPIFANVLAIIVMAFGIFSVMNLPVERYPDIAPPKITVSANYSGADAQTVEQ SVTQILEQQIQGIDHLLYFSSSSDSSGRSRITISFDNGTNPDTAQVQVQNSISGVIRRLP DEVQRQGVTVSKSLGDTFMVIGLYDSTGKTGNIELSDYLTTHVVDNLNRIEGGGETDVFG SQYAMRIWLNPDKLKQYNLMPSDVANAITAQNTQVAAGAIGDLPVIDGQYLNTKVTAGSR LKTVEDFKNIVVKSNKTASYVYLKDIARVELGAENYQSFNTINGYPAAGLGISLSSGANA IQTSKLIHQTLDQLTTKLPAGYKIVYPRDNTPFVQESIKEVVKTLVEAIILVILVMFLFL QSWRATLIPSITVPVVILGTFAVLYVLGFSINTLTLFALVLAIGLLVDDAIVVVENVERL MHEQHLSPKEAAIESMGEISGALVGITLVLTAVFIPMSFLGGSIGVIYRQFSITLVAAMA LSLIVALILTPALCALILKPNLQPQRWAVWFNQKIEQLKNQYIKLVQTSIHYSKSVIVIF VALIAVFTLFYNGLKSGFIPKEDQGILSVQIKLVDSAPISQSQKIGEQVRQYFLTQEDKN VDLVLIRYGRNYSGTGQNLAQGFIALKPWDVRTGKENSAEAIQKRAMKYFSHFNNAQINV TLPASVNGLGQTDGLDLWIQDLNGQGQDFLDSAFRQLQAQSKNYSTFENFDKQSTNSKAN LNIKIDQKQALANGLQLSAINNTLSSAWGGTYVNDFIDRGRIKRVMIQGDAEFRSKPEDL YNWSVRNDQNEMVPFSSFANFSWGGAPEIVKRYMGYSALQLQADVASGSSSGQAMKDVEQ LVNQQKDIGLAWTGLSFEEQKSTNQAVWLYLISAGFIFLCLAALYESLSIPAAVMTSIPL GVGGSVIFSYIFGLPNDVYFQIALLTTIGLSCKNAILIVEFAALAQEKGKNAIQAALEGA SLRLRPILMTSLAFGAGVIPLVFAQGAGAVSRQEIGISILGGVMFGTVLVLFFIPVMYVL LRSLFRSKAST >gi|333032473|gb|GL891953.1| GENE 39 55220 - 55795 556 191 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02903 NR:ns ## KEGG: ACICU_02903 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 191 1 191 191 370 100.0 1e-101 MPQEKKLTQQQVIALERDLAKFATMMDSAVRIPFTKQGIGADAALSTIPIAGDVAGFALT CYAIYKAKQIGVPQHKLTPVIKLAVVDAVVGFVPVAGTIFDIFIRPSRKALDVVHTHIRE EYAIQSDIHVVHPYLHEKLEKKQQQSAFWRNPVVSWLWLHIPDLLGAFVLLLIGLAVWWG ASYLWGLYQTM >gi|333032473|gb|GL891953.1| GENE 40 55845 - 56750 1227 301 aa, chain - ## HITS:1 COG:PA2830 KEGG:ns NR:ns ## COG: PA2830 COG0501 # Protein_GI_number: 15598026 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Pseudomonas aeruginosa # 1 295 1 286 291 352 64.0 3e-97 MMRIGLFLLTNLAVLVVAGIILSLFGVGSYHGAGGLNLGNLLVICFVFGMVGSLVSLFMS KWMAKKTTGTELIDPNAPRNQAESWLLQTVAELSQRAGINMPEVGIFPSYQSNAFATGWN KNDALVAVSSGLLERMNKDELRAVLAHEIGHVANGDMVTLALIQGVVNAFVMFFARVVGD FIDRNVFGRQDNEAPGMGYFIITMVLDIVFGILASAIVMWFSRYREYRADEAGARLAGKQ AMISALLRLQAETELPDQMPKEMKAFAIAEGKEQGFSLAALFQTHPTIEQRVAALHQLDC P >gi|333032473|gb|GL891953.1| GENE 41 57008 - 57871 718 287 aa, chain - ## HITS:1 COG:XF0907 KEGG:ns NR:ns ## COG: XF0907 COG0741 # Protein_GI_number: 15837509 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Xylella fastidiosa 9a5c # 85 204 162 281 297 148 60.0 1e-35 MKNSVQYLFSCLLGMTTFSVGITPTSAGQMYIYQDKNGSTLLTNRKSYDHSLKKVKVTYY PDSNIHSYSNWGTSEASVLPSYSKNKNAFDHIIKQAAQQHGVSEGLIKAVMHTESGFNVN AHSPVGAQGLMQLMPATARRFNVSNAYDPQQNIFAGAKYLSWLLKRFNGNTQMALAAYNA GEGNVDKYGGIPPFRETQDYVRRVTSRYQNLYSSGVGLSSFSNSSISAQAINQPAIPHST STQVSAQPIKYSSSRQIVTLPDGTYTDAPTGTYVTNNATAIAHIRIE >gi|333032473|gb|GL891953.1| GENE 42 58375 - 59280 1034 301 aa, chain + ## HITS:1 COG:PA1192 KEGG:ns NR:ns ## COG: PA1192 COG0037 # Protein_GI_number: 15596389 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Pseudomonas aeruginosa # 25 296 10 274 274 373 65.0 1e-103 MYAPVESNEGFNFKPELPTSSAYYRLLKKLRRQVGHAIRDFNMIEDGDKVMVCVSGGKDS YTLLDILLQFKRIAPINFDIVAVNLDQKQPGFPEDVLPRYMEENNIPYYILEKDTYSITK RLTPEGKTYCAVCSRLRRGSLYGFAQEIGATKVALGHHRDDIIATFFLNLFHGGSLKAMP PKLLSSDKKNILIRPLAYVEEKDIIKYAELRKFPIIPCNLCGSQENLQRAMINEMLREWD KQYPKRLHSIFGALQNVSPSQLADRDLFDFEVLDSQRELDFKDPEELKKRLDVVNLSFAA E >gi|333032473|gb|GL891953.1| GENE 43 59487 - 59870 505 127 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000821 NR:ns ## KEGG: ABBFA_000821 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 127 1 127 127 208 100.0 5e-53 MPAFLTDDWFATVEKLTAEAGDLNLPPALANLAINLVVTDASGNTELALDGGKIQKGLSS NAKTTLNMDAETLRKVFLEFDMAAAMQAFMTGKIKVQGDMSQLMALQTAKPSQEQKDLFK KVLEQTA >gi|333032473|gb|GL891953.1| GENE 44 59962 - 61074 911 370 aa, chain - ## HITS:1 COG:PA3764 KEGG:ns NR:ns ## COG: PA3764 COG4623 # Protein_GI_number: 15598959 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein # Organism: Pseudomonas aeruginosa # 150 359 191 413 452 168 43.0 2e-41 MHSNSSSGSRLGLSSLFSSLPLKVLALSTMFFPFHSINAGKTLQYNTVVNTNTLTVVAVE SPTTVFKEDQFLHGFGYDLARNYAQSLNVKLDFKIVTDNATALKWVQQGKANLAMTTASL SSIENKGLMSFSASCGDIVNLQKNGLNPNLSWVFKQADDPLTQTASGFVCQSKQNGLTQQ LASFYNRNVVKPEAWSTIQRDLSARIPIYKASFKQSAAQYDLDWHLLAAIGYQESYLKPE SVSPTGVRGLMMLTNSTARAMGVSNRNDPAQSIQGGAKYYDLMLSEYDDIPFPDRNWYAL VAYNMGPGAVNQIQKRLQAQGKDPNQWVNLYNYLQSNKTRNGRYKQAVQYVTRIRAYLEH IKTAQTRINI >gi|333032473|gb|GL891953.1| GENE 45 61447 - 61941 581 164 aa, chain + ## HITS:1 COG:VC2715 KEGG:ns NR:ns ## COG: VC2715 COG0782 # Protein_GI_number: 15642709 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Vibrio cholerae # 1 158 1 158 161 210 70.0 8e-55 MKSNLITRSGHDKLVAELKQLWHEERPEITKKVNWAASLGDRSENADYQYNKQLLRKIDR RVRYLGKRLEELKIVDYSPEQEGKVYFGAWVDIENEEGEQKTLRIVGVDEIYDHHPQHIS IESPMARALLSKEVDDEVEVHTPLGKKLWYINAIRYEKPKNDEI >gi|333032473|gb|GL891953.1| GENE 46 62200 - 62559 385 119 aa, chain - ## HITS:1 COG:no KEGG:ACICU_02896 NR:ns ## KEGG: ACICU_02896 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 119 1 119 119 240 100.0 1e-62 MQAFAALFDKDATFVNRFGHYVKGVDEIIAMHQPIHETIYRDSTLENELIDLIPMSEDIC ISHFWSRLTAGVAHPQGPHQIDTLILTVLTQKNHSWYIQALENVTLTNPRTGETILRNM >gi|333032473|gb|GL891953.1| GENE 47 63338 - 67336 4395 1332 aa, chain + ## HITS:1 COG:AGl3476 KEGG:ns NR:ns ## COG: AGl3476 COG1020 # Protein_GI_number: 15891854 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 1326 36 1338 1344 852 37.0 0 MNQFVTNTKNVIRGKYHPEFLQNEVLADIFAHTAQTLPDKTALIEADKTLSYGELYQQAL IMAQHLALKGVKPGHIVGLWLPRGIELLKAQLAICLSGAAWLPFDMDTPADRIAVCLEDA EAVGMITTDEWYEHLAEVPQTKWTNTELQKPLSESVSLAKTTPDQPAYIIYTSGSTGKPK GIVITQKNICHFLRSENSILGIQEQDKVYQGFSVAFDMSFEEIWLSYLVGATLWIAPKSL VSDPERLCQTLKQEQITVLHAVPTLLALFPEDVPNLRIINLGGEMCPDSLVDRWALPHHQ MFNTYGPTETTVSASLELLERGKPVTIGKPLPNYGMLVINSERELLEQGETGELCIFGPS VAQGYLGRPDLTADKFIENPWAMSVEEELLYRTGDLAKIDEFGQVHCLGRADDQVKIRGF RVELGEIEAALCDIDGIGTAAVILRPEDGIDQLIAFIAPEIDAKQAIEIKELRHNLSQRL PPYMVPNRFEIIEEVPRLLSGKIDRKALKARPLTSVVDRSESDQPQNPAEEILFEILNRL FPNMPIKLDSDFFDDLGGHSLLAAVLISNLREHAEYSHLTIQNLYQARRVGAIAALMLEQ PEPTLFDSQIGQDNPRNQTYKWLCGIAQLVTIPVLISINILQWLAPFFTYHYFTGGTRDS IPYAIALSLLVYVSVIMSSFVLSITVKRLLMLGIGAGRYPLWGLTYFRWWLADRISNISP VYLLSGSTLLNLYLKALGAKIGHDVTISSVHIRMPSLLTIEDGVSIGSQVNLENAKVEHG HLVLGSIHLKQDSYVGSYAVLEENTVLEKQAHVNALTSIEYDTVVPEGEIWDGTPAQKIG HIDEQAKLPERPKLSFIRKIAEYGYYGVSALIIACLFFIPIFPSFLLVDWLDVNVFNINP NNHLQIALYYFILAIPASAMMMMITAVISSGLRKIALPRLETGTYAVHGSTYYRKWFAAQ ILETSLQTLHGLFATIYAPTWFRMLGAKVGKNTEISTATGVIPEMLTLGEESFIADAVML GDEEIKGGWMSLKATKIGNRSFVGNSAYIADGTVLPDNVLIGVQSKTPDNREMYDGQTWF GSPALLLPAREAAEKYPDHLTFKPSIKRRLMRGFIEGLRIVLPAALAIGVGYMIVLDVID VINNYNIETGLVALTLAGLLYGVGCFLIVALLKWILIGRYQPRSTPMWTMFVWLSEGITS LYESVAIPNFLNYLRGTPMLPFFLRILGVRIGKDVYMDTADITEFDCVSIGDRAEFNSFS GPQTHLFEDRIMKIGQVNVGNDVVVNARSIILYNANVSNHAVLGPLTLVMKGENIPAKSA WIGSPAVPWVHK >gi|333032473|gb|GL891953.1| GENE 48 67797 - 68882 563 361 aa, chain + ## HITS:1 COG:no KEGG:ACICU_02894 NR:ns ## KEGG: ACICU_02894 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 361 1 361 361 620 100.0 1e-176 MNTDVVELKTINEVGLPLDPETFSRVILDFLGRKENLSYKSHDNFIINLEDISQFNHILN SKISYQKNIILEHFSINFGYSDGTFREINGSEALSKFLETRSIDTTSINLNWKIIIKFDH SPTIETQEIDLLFISSIEKKINDEDFSYIELSINHTNQSWALDILSAFKDKINEIAIKPS ILKEKYNKITDNLFFATIVPMFFIVLGLGLTIPVAQNETQRLRQDLVQYNLKQNYKDDLS KVVGLLNITTLERSELKELGTKNKEIEKIIEKNQKNVALHLTLIVLLFIIPFVVRKYIKY SINYFNHKSFILVNNYSQRKLQKYKDDKSKITYIGFTVFVTSITFSILASVIFKVLDALV F Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:48:07 2011 Seq name: gi|333032472|gb|GL891954.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld544, whole genome shotgun sequence Length of sequence - 128130 bp Number of predicted genes - 118, with homology - 117 Number of transcription units - 74, operones - 29 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 609 - 668 4.8 2 2 Tu 1 . + CDS 785 - 1363 818 ## COG0693 Putative intracellular protease/amidase + Term 1393 - 1425 1.2 - Term 1373 - 1421 9.2 3 3 Op 1 . - CDS 1442 - 1960 528 ## ACICU_03038 hypothetical protein - Prom 1982 - 2041 3.4 4 3 Op 2 . - CDS 2044 - 3111 830 ## ACICU_03039 hypothetical protein - Prom 3174 - 3233 7.5 + Prom 3151 - 3210 4.6 5 4 Tu 1 . + CDS 3236 - 3985 467 ## ACICU_03040 hypothetical protein + Term 4005 - 4030 -0.5 - Term 3990 - 4021 1.6 6 5 Tu 1 . - CDS 4025 - 5221 1129 ## COG1133 ABC-type long-chain fatty acid transport system, fused permease and ATPase components - Prom 5260 - 5319 5.2 - Term 5265 - 5309 -0.6 7 6 Tu 1 . - CDS 5458 - 6693 1385 ## COG1171 Threonine dehydratase - Prom 6732 - 6791 6.7 8 7 Tu 1 . - CDS 6891 - 7826 1090 ## COG1752 Predicted esterase of the alpha-beta hydrolase superfamily - Prom 7938 - 7997 6.9 - Term 7982 - 8022 3.3 9 8 Op 1 . - CDS 8031 - 9506 685 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 9545 - 9604 2.9 - Term 9555 - 9599 7.1 10 8 Op 2 . - CDS 9606 - 9773 114 ## ABAYE0688 hypothetical protein - Prom 9846 - 9905 4.0 - Term 9779 - 9838 -0.4 11 9 Tu 1 . - CDS 9929 - 10132 263 ## ABSDF0665 hypothetical protein 12 10 Tu 1 . + CDS 10643 - 11347 821 ## COG0778 Nitroreductase + Term 11356 - 11403 2.5 13 11 Tu 1 . - CDS 11375 - 12589 1257 ## COG0477 Permeases of the major facilitator superfamily - Prom 12744 - 12803 4.6 + Prom 12584 - 12643 3.6 14 12 Tu 1 . + CDS 12783 - 14891 1793 ## COG1289 Predicted membrane protein + Term 14917 - 14960 -0.5 + Prom 14909 - 14968 5.3 15 13 Op 1 . + CDS 14992 - 15567 551 ## ABBFA_000668 hypothetical protein + Term 15579 - 15620 8.3 16 13 Op 2 . + CDS 15630 - 15839 86 ## 17 13 Op 3 . + CDS 15725 - 18271 2433 ## COG0369 Sulfite reductase, alpha subunit (flavoprotein) + Term 18290 - 18333 7.0 + Prom 18278 - 18337 4.8 18 14 Tu 1 . + CDS 18398 - 19183 765 ## COG1434 Uncharacterized conserved protein + Term 19198 - 19236 2.6 - TRNA 19645 - 19721 94.4 # Asp GTC 0 0 - Term 19968 - 20021 -0.9 19 15 Op 1 . - CDS 20149 - 20652 549 ## ABSDF0653 hypothetical protein - Prom 20675 - 20734 5.0 20 15 Op 2 . - CDS 20742 - 21110 237 ## COG2832 Uncharacterized protein conserved in bacteria - Prom 21187 - 21246 5.7 + Prom 21104 - 21163 3.1 21 16 Tu 1 . + CDS 21215 - 22123 753 ## COG3782 Uncharacterized protein conserved in bacteria + Prom 22135 - 22194 5.0 22 17 Tu 1 . + CDS 22225 - 22365 200 ## AB57_3306 entericidin EcnAB + Term 22381 - 22425 5.1 + Prom 22398 - 22457 8.1 23 18 Tu 1 . + CDS 22491 - 23627 1192 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 23637 - 23666 1.4 - Term 23619 - 23660 8.3 24 19 Op 1 . - CDS 23663 - 24127 529 ## ACICU_03058 hypothetical protein 25 19 Op 2 7/0.000 - CDS 24124 - 28644 4135 ## COG0643 Chemotaxis protein histidine kinase and related kinases - Prom 28696 - 28755 2.0 - Term 28679 - 28729 6.1 26 19 Op 3 17/0.000 - CDS 28791 - 30869 2250 ## COG0840 Methyl-accepting chemotaxis protein - Term 30878 - 30911 0.7 27 19 Op 4 13/0.000 - CDS 30916 - 31452 170 ## COG0835 Chemotaxis signal transduction protein 28 19 Op 5 16/0.000 - CDS 31513 - 31875 465 ## COG0784 FOG: CheY-like receiver 29 19 Op 6 . - CDS 31899 - 32282 484 ## COG0784 FOG: CheY-like receiver - Prom 32488 - 32547 9.6 + Prom 32456 - 32515 15.3 30 20 Op 1 . + CDS 32565 - 33203 516 ## ACICU_03064 hypothetical protein 31 20 Op 2 27/0.000 + CDS 33263 - 34381 1169 ## COG0845 Membrane-fusion protein 32 20 Op 3 . + CDS 34397 - 37495 3379 ## COG0841 Cation/multidrug efflux pump 33 20 Op 4 . + CDS 37554 - 39269 2369 ## COG0442 Prolyl-tRNA synthetase + Term 39278 - 39332 16.1 - Term 39266 - 39320 14.2 34 21 Tu 1 . - CDS 39324 - 39665 365 ## COG3422 Uncharacterized conserved protein - Prom 39793 - 39852 9.0 - Term 39814 - 39853 8.4 35 22 Op 1 . - CDS 39877 - 40221 356 ## COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism - Prom 40244 - 40303 6.0 36 22 Op 2 . - CDS 40312 - 40668 435 ## COG3189 Uncharacterized conserved protein - Prom 40742 - 40801 6.9 - Term 40740 - 40786 9.1 37 23 Tu 1 . - CDS 40811 - 41260 455 ## COG3832 Uncharacterized conserved protein - Prom 41283 - 41342 4.9 + Prom 41322 - 41381 5.3 38 24 Tu 1 . + CDS 41477 - 42199 852 ## COG0354 Predicted aminomethyltransferase related to GcvT + Term 42220 - 42255 4.0 + Prom 42228 - 42287 5.7 39 25 Tu 1 . + CDS 42345 - 43055 636 ## COG1651 Protein-disulfide isomerase + Term 43061 - 43101 8.4 + Prom 43119 - 43178 4.5 40 26 Tu 1 . + CDS 43238 - 44062 871 ## COG0790 FOG: TPR repeat, SEL1 subfamily + Term 44069 - 44106 1.1 - Term 44057 - 44094 1.1 41 27 Tu 1 . - CDS 44097 - 45020 693 ## COG0679 Predicted permeases - Term 45038 - 45073 5.1 42 28 Op 1 . - CDS 45085 - 46194 1376 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 43 28 Op 2 . - CDS 46204 - 48333 2179 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 48355 - 48414 6.4 44 29 Tu 1 . - CDS 48466 - 49032 459 ## COG2094 3-methyladenine DNA glycosylase - Prom 49073 - 49132 5.2 + Prom 49017 - 49076 6.3 45 30 Op 1 . + CDS 49108 - 49932 701 ## COG0266 Formamidopyrimidine-DNA glycosylase 46 30 Op 2 . + CDS 49952 - 50242 337 ## COG0760 Parvulin-like peptidyl-prolyl isomerase + Term 50278 - 50318 2.7 47 31 Op 1 . - CDS 50253 - 50714 428 ## COG2105 Uncharacterized conserved protein 48 31 Op 2 . - CDS 50748 - 51179 653 ## COG1970 Large-conductance mechanosensitive channel - Prom 51307 - 51366 8.9 - Term 51374 - 51416 6.1 49 32 Tu 1 . - CDS 51435 - 53270 2163 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 53296 - 53355 5.8 + Prom 53360 - 53419 7.0 50 33 Op 1 . + CDS 53449 - 54807 330 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 54828 - 54859 3.4 51 33 Op 2 1/0.222 + CDS 54870 - 55883 618 ## COG2813 16S RNA G1207 methylase RsmC 52 33 Op 3 . + CDS 55905 - 57365 1687 ## COG0833 Amino acid transporters + Term 57439 - 57471 -0.9 + Prom 57386 - 57445 4.9 53 34 Op 1 . + CDS 57642 - 58847 1216 ## COG1690 Uncharacterized conserved protein 54 34 Op 2 . + CDS 58851 - 59009 125 ## ABBFA_000622 hypothetical protein + Term 59092 - 59121 2.1 - Term 59068 - 59119 6.8 55 35 Tu 1 . - CDS 59134 - 60204 1335 ## COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins 56 36 Tu 1 . + CDS 60586 - 61101 196 ## COG4970 Tfp pilus assembly protein FimT + Prom 61128 - 61187 3.0 57 37 Op 1 . + CDS 61210 - 62385 1421 ## COG0183 Acetyl-CoA acetyltransferase + Term 62405 - 62431 -1.0 + Prom 62405 - 62464 2.1 58 37 Op 2 . + CDS 62512 - 62955 440 ## COG2764 Uncharacterized protein conserved in bacteria + Term 62963 - 63008 10.1 59 38 Tu 1 . - CDS 62998 - 63351 286 ## ACICU_03093 quaternary ammonium compound-resistance protein - Prom 63373 - 63432 6.9 - Term 63380 - 63420 4.2 60 39 Op 1 4/0.056 - CDS 63434 - 63919 739 ## COG3749 Uncharacterized protein conserved in bacteria 61 39 Op 2 . - CDS 63912 - 65555 2077 ## COG0155 Sulfite reductase, beta subunit (hemoprotein) - Prom 65630 - 65689 8.2 - Term 65660 - 65717 9.8 62 40 Op 1 . - CDS 65722 - 68148 2613 ## COG4993 Glucose dehydrogenase - Prom 68222 - 68281 4.5 63 40 Op 2 . - CDS 68301 - 69554 1472 ## COG3659 Carbohydrate-selective porin - Prom 69590 - 69649 5.3 64 41 Tu 1 . - CDS 69689 - 70807 1244 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase - Prom 70853 - 70912 8.1 + Prom 70795 - 70854 8.4 65 42 Tu 1 . + CDS 71018 - 72028 1024 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 72057 - 72089 4.0 + Prom 72105 - 72164 3.2 66 43 Op 1 20/0.000 + CDS 72200 - 73405 1622 ## COG0183 Acetyl-CoA acetyltransferase 67 43 Op 2 . + CDS 73426 - 75561 2630 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 75599 - 75641 -0.2 + Prom 75600 - 75659 8.3 68 44 Op 1 . + CDS 75726 - 75980 338 ## ABAYE0627 hypothetical protein 69 44 Op 2 . + CDS 75996 - 76856 954 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily + Term 77018 - 77069 -0.8 70 45 Op 1 3/0.111 - CDS 76886 - 77305 492 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 71 45 Op 2 . - CDS 77318 - 78205 898 ## COG0500 SAM-dependent methyltransferases 72 45 Op 3 . - CDS 78280 - 78528 209 ## ABBFA_000603 hypothetical protein - Prom 78559 - 78618 6.3 + Prom 78544 - 78603 6.8 73 46 Tu 1 . + CDS 78655 - 79296 517 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 79325 - 79366 0.0 + Prom 79347 - 79406 3.9 74 47 Tu 1 . + CDS 79431 - 80741 1421 ## COG0477 Permeases of the major facilitator superfamily + Term 80759 - 80817 4.4 - Term 80741 - 80804 17.5 75 48 Op 1 . - CDS 80806 - 81249 519 ## ACICU_03109 hypothetical protein - Prom 81305 - 81364 5.0 - Term 81322 - 81371 10.2 76 48 Op 2 . - CDS 81381 - 84104 3565 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) + Prom 84398 - 84457 9.6 77 49 Tu 1 . + CDS 84512 - 85153 768 ## COG0450 Peroxiredoxin + Term 85312 - 85341 -0.3 + Prom 85331 - 85390 4.8 78 50 Op 1 . + CDS 85451 - 86227 501 ## COG0491 Zn-dependent hydrolases, including glyoxylases 79 50 Op 2 . + CDS 86224 - 86802 527 ## COG2365 Protein tyrosine/serine phosphatase + Term 86907 - 86938 -0.8 - Term 86753 - 86801 13.5 80 51 Op 1 . - CDS 86821 - 87885 1475 ## ABBFA_000595 protein TolA 81 51 Op 2 15/0.000 - CDS 87882 - 89168 1075 ## COG0285 Folylpolyglutamate synthase 82 51 Op 3 7/0.000 - CDS 89165 - 90061 1049 ## COG0777 Acetyl-CoA carboxylase beta subunit 83 51 Op 4 . - CDS 90058 - 90861 572 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc - Prom 90920 - 90979 5.7 84 52 Tu 1 . - CDS 91106 - 92155 744 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 92184 - 92243 5.2 + Prom 92096 - 92155 5.3 85 53 Tu 1 . + CDS 92276 - 93151 922 ## COG3687 Predicted metal-dependent hydrolase 86 54 Op 1 . - CDS 93160 - 94155 748 ## ACICU_03120 hypothetical protein 87 54 Op 2 . - CDS 94193 - 94705 516 ## ACICU_03121 hypothetical protein 88 54 Op 3 23/0.000 - CDS 94715 - 95944 1538 ## COG0133 Tryptophan synthase beta chain 89 54 Op 4 . - CDS 95928 - 96587 683 ## COG0135 Phosphoribosylanthranilate isomerase - Prom 96620 - 96679 3.6 90 55 Tu 1 . + CDS 96945 - 98828 1777 ## COG4206 Outer membrane cobalamin receptor protein + Term 98872 - 98911 4.4 + Prom 98833 - 98892 5.6 91 56 Op 1 . + CDS 98925 - 99503 622 ## COG2096 Uncharacterized conserved protein 92 56 Op 2 . + CDS 99576 - 100289 734 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 100293 - 100333 1.2 - Term 100288 - 100315 0.1 93 57 Tu 1 . - CDS 100318 - 100791 317 ## ABAYE0603 signal peptide - Prom 100969 - 101028 3.8 + Prom 100909 - 100968 4.1 94 58 Tu 1 . + CDS 101057 - 102229 899 ## COG1398 Fatty-acid desaturase + Term 102248 - 102293 10.1 + Prom 102260 - 102319 4.5 95 59 Tu 1 . + CDS 102343 - 103785 1290 ## COG0397 Uncharacterized conserved protein + Term 103801 - 103846 5.2 96 60 Op 1 40/0.000 - CDS 103849 - 104535 762 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 97 60 Op 2 . - CDS 104555 - 106111 1424 ## COG0642 Signal transduction histidine kinase - Prom 106307 - 106366 7.8 + Prom 106254 - 106313 4.6 98 61 Tu 1 . + CDS 106345 - 106725 541 ## ACICU_03132 hypothetical protein + Term 106743 - 106780 8.7 + Prom 106763 - 106822 4.9 99 62 Op 1 12/0.000 + CDS 107015 - 108817 2367 ## COG1960 Acyl-CoA dehydrogenases + Term 108858 - 108894 2.0 + Prom 108846 - 108905 7.6 100 62 Op 2 . + CDS 108985 - 110766 2044 ## COG1960 Acyl-CoA dehydrogenases + Term 110777 - 110821 8.4 - Term 110762 - 110809 6.0 101 63 Tu 1 . - CDS 110838 - 111734 586 ## COG0583 Transcriptional regulator - Prom 111804 - 111863 5.8 + Prom 111757 - 111816 3.9 102 64 Tu 1 . + CDS 111840 - 112550 580 ## COG0625 Glutathione S-transferase + Term 112605 - 112647 7.1 + Prom 112624 - 112683 8.9 103 65 Tu 1 . + CDS 112711 - 113193 374 ## COG3223 Predicted membrane protein + Term 113199 - 113227 -1.0 104 66 Tu 1 . - CDS 113232 - 113615 358 ## ABBFA_000573 hypothetical protein - Prom 113704 - 113763 3.6 + Prom 113583 - 113642 4.3 105 67 Tu 1 . + CDS 113780 - 114226 270 ## ACICU_03140 hypothetical protein - Term 114310 - 114365 6.3 106 68 Op 1 . - CDS 114421 - 115884 1301 ## ACICU_03141 phospholipase D endonuclease domain-containing protein 107 68 Op 2 . - CDS 115960 - 118017 2241 ## COG1629 Outer membrane receptor proteins, mostly Fe transport - Prom 118049 - 118108 9.2 + Prom 118025 - 118084 6.3 108 69 Op 1 . + CDS 118153 - 118917 371 ## ACICU_03143 hypothetical protein + Term 119028 - 119065 2.7 + Prom 118959 - 119018 6.7 109 69 Op 2 . + CDS 119087 - 120865 2430 ## COG0173 Aspartyl-tRNA synthetase + Term 120870 - 120925 18.6 - Term 120849 - 120915 7.8 110 70 Tu 1 . - CDS 120918 - 121946 416 ## ACICU_03145 glycosyltransferase - Prom 121981 - 122040 7.3 111 71 Tu 1 . + CDS 122149 - 122367 307 ## ABBFA_000566 hypothetical protein - Term 122335 - 122382 3.3 112 72 Op 1 . - CDS 122405 - 123334 729 ## ACICU_03147 hypothetical protein 113 72 Op 2 . - CDS 123364 - 124119 553 ## ACICU_03148 putative glycosyltransferase - Prom 124168 - 124227 6.4 + Prom 124109 - 124168 7.1 114 73 Tu 1 . + CDS 124188 - 125078 652 ## ACICU_03149 hypothetical protein + Term 125118 - 125162 2.1 115 74 Op 1 26/0.000 - CDS 125075 - 126109 1079 ## COG0438 Glycosyltransferase 116 74 Op 2 3/0.111 - CDS 126121 - 126885 723 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 117 74 Op 3 . - CDS 126882 - 127634 809 ## COG0726 Predicted xylanase/chitin deacetylase 118 74 Op 4 . - CDS 127634 - 128128 369 ## ABSDF0527 hypothetical protein Predicted protein(s) >gi|333032472|gb|GL891954.1| GENE 1 2 - 508 197 168 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03036 NR:ns ## KEGG: ACICU_03036 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 11 168 254 411 411 264 100.0 9e-70 NCRTSCLNSPIDSLSNIGSKFKELCFPILTNSFNNDLLEKLRVSINWYSASINSESLNES FLFCAIGMESLLTTGRDSITKVLAENTAFLIAKDDIESRKLVYNTMCNLYAKRSGIAHGG NINIETKELKQIRYYLAMSIIKIISKIKADEINSNKDLITFLDNQKFG >gi|333032472|gb|GL891954.1| GENE 2 785 - 1363 818 192 aa, chain + ## HITS:1 COG:BMEI0793 KEGG:ns NR:ns ## COG: BMEI0793 COG0693 # Protein_GI_number: 17987076 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Brucella melitensis # 3 191 24 212 214 283 69.0 1e-76 MSKKILMLVGDYAEDYETMVPFQFLTGLGYTVHAVCPNKKNGDHIATAIHDFEGEQTYSE KRGHNFAINYDFDAVNTEDYVGLVIPGGRAPEYLRMNERVVEIVREFDRVKKPIAAVCHG AQLLAAADILKDRLCSAYPACAAEVKLAGGQYADIAVTEAVTDGHLVTAPAWPAHPAWLA QFVKVLGAKISI >gi|333032472|gb|GL891954.1| GENE 3 1442 - 1960 528 172 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03038 NR:ns ## KEGG: ACICU_03038 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 172 1 172 172 306 100.0 2e-82 MSRHLYAIARRKFSHLSRSIYVAATVLGVTQIAMAGPTVDQLSDCLVKATTASDKTTVLQ WTFTALAAHPDLKAFSNVTPEQKDQLDQKLAQVLQRIIVEQCSAQTKAVIQAEGVKAVGE AFQQLGQSAGEDIVKDPAVKQQLQGTLRYIDLNKLVTTFLTPEIWNKLGITR >gi|333032472|gb|GL891954.1| GENE 4 2044 - 3111 830 355 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03039 NR:ns ## KEGG: ACICU_03039 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 355 1 355 355 714 100.0 0 MKNILSICCLAVISSYSFAQDIKGISFSHQEWEISCSNTGTCKAAGYQNEENGDNPASIL LTRKAGPKQPVQIGFALSDYEQSIPANQLKNIHFYINGKDLGAVGVDGTELPIMGKLNSS QVNALLQQSKQKTEIVFKNAQHKWKVSDAGMTAVLLKMDDFQKRIGTIGALVKKGSANEN QVLMPEPKLVVKRIKTSTKPYLTLQPKNKHYQAIHRSLMAAKPNPKEDGFCKGIYGGNSD GAEPQKIELYKLTNKKVLATTLCWRGAYNEGYGAWVLDESLNGKAAFVTESASDFDSGII SSAQKGRGIGDCWASEEWVWDGKSFVHTKDMWTGMCKGLAAGGVWELDRIESVVK >gi|333032472|gb|GL891954.1| GENE 5 3236 - 3985 467 249 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03040 NR:ns ## KEGG: ACICU_03040 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 249 1 249 249 496 100.0 1e-139 MKKLNFLLWATLVSLNSTAYAEVKSFTPHFPKFYSSATTRKADNQFYALGEAKFLNGVAV PFYGITAQNPIEDGLLKSFEKCTPKSCSFNFKLDAQHAKQLKLLALPEVGVVLVPRNWQD IQANAGANGTGFALIMSPDQKQAIKLYDSSFCVGCGLPNATLYFPELLKESLENEYGGFK DPKNLINIVHPSKKVAFFSYQIPQVNNKTHGIAKYDDEDTFNYKEIQVTLDKSQQSLVGP ILNFYNATH >gi|333032472|gb|GL891954.1| GENE 6 4025 - 5221 1129 398 aa, chain - ## HITS:1 COG:SMb20999 KEGG:ns NR:ns ## COG: SMb20999 COG1133 # Protein_GI_number: 16264873 # Func_class: I Lipid transport and metabolism # Function: ABC-type long-chain fatty acid transport system, fused permease and ATPase components # Organism: Sinorhizobium meliloti # 1 396 1 397 420 477 63.0 1e-134 MFKSFFPSPRYFFISAVIWLALNMVLWYTGGDHWGQYLGFPQGYADAELPIGVSRFWSPA FLWFYLWFLVSTALFASFWKIISNNPWQRWSIWGSAFILFNIWFSVQVSVAINAWYVPFW DLIQQMLSSGGGDLSALYSETLVFLYIAMVAVTLAVINAFFTSHYVFRWRTAMNEYYTEH WEKLRHIEGASQRVQEDTMRFATILEDLGVELVKAVITLIAFLPILFQLSKHVPVLPIVG ELEHSLVWAAIVWSIFGTVLLMVVGIKLPGLQFNNQKVEAAYRKELVYGEDHADRAKPAT LRELFSNVRKNYFRLYFHYAYFNMTAIWYGQLDILYNLVVLFPSIAAGKLTLGLIQQIAN VFGRVRESFQYLITSWKTIIELLSIYKRLKAFESILHK >gi|333032472|gb|GL891954.1| GENE 7 5458 - 6693 1385 411 aa, chain - ## HITS:1 COG:CC3635 KEGG:ns NR:ns ## COG: CC3635 COG1171 # Protein_GI_number: 16127865 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Caulobacter vibrioides # 13 407 5 398 400 356 50.0 4e-98 MIQQQVKNEFPTLEDIHAAAERLDGLVVKTPFVFSETISKTLGAEMWLKFENLQFTASFK ERGALNKLLSLSEQEKQHGVIAASAGNHAQGVAYHAQRTGVTATIVMPKSTPNVKVQRVR EYGARVILHGQDFSEAAAEMHRVAQEESLTIIHPFDDAEIIAGQGTIALEMLEAVPDLDI LVVPIGGGGLISGIAIAAKSINPKIKIIGVQSVVYPSMAKLLCNYQLAVSMGSTVAEGIA VKTPGELTTQIAKHFVDDIVVVTEDMIEEAIALLLNIEKTVCEGAGATGIAAIMSRPDLF LGHKVGVVLSGGNIDTRVMVSVLQRHLTRTGRMVRIRVELPDNPGALARLTAIIAEQGGN IYELRHERFAATSRAKESAVSVDIELKSAPDLEPLIQAMQLEGYIVRKEEI >gi|333032472|gb|GL891954.1| GENE 8 6891 - 7826 1090 311 aa, chain - ## HITS:1 COG:XF0066 KEGG:ns NR:ns ## COG: XF0066 COG1752 # Protein_GI_number: 15836671 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Xylella fastidiosa 9a5c # 43 298 96 346 395 200 41.0 3e-51 MVLAGCQTTSHLSALKPQTAEAYSRFVDQPFAQLKKQHKKPVVALVLGSGGARGYAHIGV IEVLEQHGIRPDFIVGTSAGSIVGAIYASGKTPDELRDTALKMKAADVRDISIGLKGFFD GKKVEDYVNQQVNNLPLEKMKIPMYVVATELKHGTKTVFNYGNTGQAVRASASIPSMFVP TKIGKSEYVDGGLVSPVPVEVARDLGADVIIAVDILAQPIYTETSNVWGLFNQNINIMQG RLAAEELQYADVVIQPDLREKAHIFDVKGREATMKAGIDAANAKLSDIQFAIDEKIAEQN LSTDGLSAQTQ >gi|333032472|gb|GL891954.1| GENE 9 8031 - 9506 685 491 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 24 466 19 445 456 268 35 1e-70 MNEQLNATLMSWVQFFNEPLWDFLVIFLLAVGIFYTVLTGAVQIRMFLQSIRVMKSSRTE GEDEHGLTPFQAFVTGLASRVGVGNIAGVAIAIAIGGPGAVFWMWVTAVLGMSSAFIEST LAQLFKVRDSNSKQFRGGPAYYITQGLRSKTFGVIFALALIFTYGFVFNSVQINAIANAS SHAWGWDKANLIAHLGGVDLEISWVGLALVVMVALAIFGGIKRIAKFAEMFVPLKAGLYL SVALYIALSNYAILPDVLKLIVTEAFHFNAAAGGFFGAAVSMAMMQGIKRGLFSNEAGMG SAPNAAAASDVKHPVNQGLVQMLGVFVDTFIVCTSTAIIILVSGVYQDAGFVGVELTQRA LETQVGHWGADFLAVLLFLFCYSAVLGNYAYAESNVQFINNNPKVMFIFRIFVLVMVYFG AIGSVPLVWSMADLFMGIMATINLVAILLLTPMARTLLKDYRAQLKQGIKEPVFKINKYP ELKKKVDSDIW >gi|333032472|gb|GL891954.1| GENE 10 9606 - 9773 114 55 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0688 NR:ns ## KEGG: ABAYE0688 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 55 11 65 65 84 100.0 1e-15 MHSVHPNGNMFSGAMNLFYLKGAFSHVTFKGLVLGMMLLKLVTVIAIQVTLKVFP >gi|333032472|gb|GL891954.1| GENE 11 9929 - 10132 263 67 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0665 NR:ns ## KEGG: ABSDF0665 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 67 27 93 93 119 100.0 5e-26 MSLPLINKQFMKQGLAITIATMKMNVTHATTEPQEIQQLGTDLNALFFNEKEKGTDSRVM TMACYSL >gi|333032472|gb|GL891954.1| GENE 12 10643 - 11347 821 234 aa, chain + ## HITS:1 COG:RSc1608 KEGG:ns NR:ns ## COG: RSc1608 COG0778 # Protein_GI_number: 17546327 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Ralstonia solanacearum # 4 234 9 235 235 228 47.0 6e-60 MNLEQVRLVDEAITSRHSVRAFLSTPIEPEVIKDILRVASRAPSGTNTQPWKVYVVTGHK RDEMVERVCAAQIEVSKNPELAEQYKETFAYYPEKWVSPFIDRRRENGWGLYGLLDIKKG EKEKMAAQQLRNFKLFDAPVGIFFTVNKAMGIGSKMDIAMMIQNVMVAAKARGLDTCPQA AWNHFHPLVLDILGAADDEELVCAIALGHADPEHIVNTFITPREPVENFAVFLD >gi|333032472|gb|GL891954.1| GENE 13 11375 - 12589 1257 404 aa, chain - ## HITS:1 COG:RSc2172 KEGG:ns NR:ns ## COG: RSc2172 COG0477 # Protein_GI_number: 17546891 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 13 386 20 393 407 261 41.0 2e-69 MSEQTAQRQYSIGWIMLLALLTALGPLSIDMYLPALPQMAHDFGVSTQMVANTLPAYFFG LAIGQLVYGPLSDRIGRKKPLYFGLALYAVASLFCVLATNEWSLIAARILQALGGCVGVV MARAAIRDRLDVQGSAQAFSSMMIVMGLAPILAPMIGAWILIWFPWQAIFIALSIVGAIC WLCVHFFFKETLAVDKRLKLSLYQVATLYGAIFKDASFRLPMFAGCLTGAALFCYISSAP AVFMDQYGLNQQEFAYVFGLNAFGIMLMSSLNKHLTTRVEITKRLKAGSMVQVTGASIVL IAGLISAAPLWLVMLGLFLAISGIGLTGPNAMALAMSKQGARAGTASAIMGSMQFACGLL GGVLLNFLIWSASLNMGVMMVLFTLSGFIVVLKAIRQAKSQSLS >gi|333032472|gb|GL891954.1| GENE 14 12783 - 14891 1793 702 aa, chain + ## HITS:1 COG:STM1073 KEGG:ns NR:ns ## COG: STM1073 COG1289 # Protein_GI_number: 16764432 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Salmonella typhimurium LT2 # 1 689 21 707 717 711 52.0 0 MLIAFSGTAFVPYFLGHQLATIPLTLGVVAAGLSDIDDRFSVRIMNLIYTYIGFFITAAS VQLLFPYPMLFALGLIASCIGWILLGSLGRRYATISYGCLVVSVYTMLGVHLFDQWYIQP ALLVAGAAWYGLIATISFLLFPVRQLQDKLAASYASLGDFLFAKSNLFDVDMTPASYQQS MIDLSLENGKLITIFNDLKTALLTRLKGDRGQKGTRRSLHYYFVAQDIHERADSAHIDYQ KLAKIFQHSDILFRFQRILAIQGKACQELNECILQRKPYIHNKRFKQSFENLRLSLVKLR NDQQYDLLWVNALFALYRNLKSIDSQLLNLETEQHIQSDKVKQAENQLKDDDLKGWNDIV VRIKQNLTPESVLFRHAIRVSIVLFIGYVFIQMTHIEYGYWIMLTALFVSQPNFNATKRR LRLRIVGTLVGIIVGLSIVFLVPSVEGQLVMLILSGVLFFELRSKQYAQATAFITILALI NFNLDGSAVAAAIPRFVDTLIGCALAWFGVTFIWPDWKFRRLPRSIRRSLQAQCNYLAEV VKQYHEGHNHALNYRIVRRAAHNTDAEVASLISTLATEPDFDPTRKSDIFEFLCLNHTFL SYIAALGAHREKIQDQAVLNVLDQALDDIQGALLRDEMPDLTAQNMLQTIRQRLSQNDED DQKSLIILQQLSLMLSVLNRFSMLKQRLSHDLDNDASELASL >gi|333032472|gb|GL891954.1| GENE 15 14992 - 15567 551 191 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000668 NR:ns ## KEGG: ABBFA_000668 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 191 1 191 191 377 100.0 1e-103 MTAKTLYAYTLQPVPYEVSEAEQRNAQLLIWRSTNKISTKIWAIMGVILALAILGLIFIK NYSTVICWVAIVCVVLYYLGRKYGLEWYVKRKMNEFPVQEIKGIRLGVQPHGIVMRQQMG LQEGVGTIGWKNIYEWYNTPDFILVNFKVKDPKGQEQQGAYILPKRMDSKNFSFNTIRKH LKESVGEPKTL >gi|333032472|gb|GL891954.1| GENE 16 15630 - 15839 86 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKINIISKIHIIYSIFGYTSLQDLHHIYIIRPCLKSFYFKFIGFWVLVLASSYPLWVLQA QFILMISKF >gi|333032472|gb|GL891954.1| GENE 17 15725 - 18271 2433 848 aa, chain + ## HITS:1 COG:PA4513_2 KEGG:ns NR:ns ## COG: PA4513_2 COG0369 # Protein_GI_number: 15599709 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, alpha subunit (flavoprotein) # Organism: Pseudomonas aeruginosa # 399 848 1 455 455 369 42.0 1e-101 MFKKFLFQIHWFLGISAGLILSIMGVTGAIYSYDQQILKWVNTDSYVVQAQSSPKLTPAQ LYQHFTTIQPEIKINSITIAKDPTASSVVNIEKEGERRGYNMMVNPYTAQVLPEVQGRKL LLLIQQIHRNLTAGEFGKQITGACALMLIYFVLSGLYLRWPKKHSARQWLAVKPKLKGRN FIWDLHAVVGTWVIVFYLLFACTGLYWSYDWWRSGMFKVLGVEQPKMQGHSGSGRNKDQL PKIQLDNAQLITALNQTWSGFNNQIGRDYSTLTVNLPKKDDGKIELSFVDATPQHERARN QAVYNYKTANIEKMELYEDKKLNQKIMSSMLPVHRGSFFGPVYQFVAMLASLAMPLFFVT GWMLYLKRRKQKKLTQAARQSLAGHYIDQNAKPWLITYATQTGVAEQLAWSTATSLQEAH QPVQVKSVQQLTEADLQQHEQILFVISTYGTGEAPDLASNFAKKLLKTNLELQHVKYAVL ALGSKEYPDTYCSFGHTVDEWLKNNGAKAFFDIIEVDNANPADIQNWNQALVKATKLDLH AVNIEKVFDNWTLQQRDLLNPNSLGQPAYNIELTASHEAVWQAGDIAEIQPGNSPERINK FLQHHHILKNAVVDSLQVSIEKALWNKDLTGEIEPFANLDHLLEQLPTLPTREYSIASIP SQQVLRLVVRQQYDESGNLGLGSGWLTQHTEINQNVALRIRTNESFHLIDDNRPIICIGN GTGIAGLMSLLHTRTRHNYTENWLIFGERQRNHDFFYASTIEAWQTMGMLKRLDLAFSRD QEQRVYVQDIIRQNAAELINWIERGAVLYVCGSIDGMASGVDQALIHILGEEQVDELRQQ GRYRRDVY >gi|333032472|gb|GL891954.1| GENE 18 18398 - 19183 765 261 aa, chain + ## HITS:1 COG:L17153 KEGG:ns NR:ns ## COG: L17153 COG1434 # Protein_GI_number: 15672393 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 91 236 29 166 194 85 38.0 9e-17 MQVSKWIRIFLAVIGSILFLDGLFLAFLNKIHVGTLVPLVLGAFFCLYALFYYHLERFFF YHYRLHTLWRFGWLCFWIWLIGLGYFFNFIKENKDASQNLPAVKAIIVLGSGVENGQPSA ILAKRLDTAAPVALSQPQAKVILTGGLDFSEKEPEALVMSRYLEQHFHIAKDRMILEDKS TSTELNLKNSKPLLEQAHINVNQPIAIVTSDFHTPRAAAIAKKQGYTQVYMVAAETPLIT RYNAWLREYFAYASGWLLNEY >gi|333032472|gb|GL891954.1| GENE 19 20149 - 20652 549 167 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0653 NR:ns ## KEGG: ABSDF0653 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 167 1 167 167 348 100.0 5e-95 MSQFKLEDADILIDLANQTLSLPKHNKFYVVSTGKNGIGEQENTGKTPRGWHRVAKKFGM QSPKNAVFIARQPTGEVYSSELAAQFPERDWILSRILWLDGLEEGFNKGEGHDTMQRYIY IHGTPDKEPMGVPMSHGCIRMRNEEIIELFDLVSEDALVYLSEQSLT >gi|333032472|gb|GL891954.1| GENE 20 20742 - 21110 237 122 aa, chain - ## HITS:1 COG:NMA0754 KEGG:ns NR:ns ## COG: NMA0754 COG2832 # Protein_GI_number: 15793729 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Neisseria meningitidis Z2491 # 12 117 12 118 119 77 43.0 8e-15 MRTLFWRTLVVIFITLGIIGAILPGMPTTVFLILAAWAASKGWPQMDAWLLNHPKYGPTL RDWRANGTVPRKAKWIATIMMTASGILMLFTSAPFWVKVFTDTTMLVVAIWLWLRPEPKL KD >gi|333032472|gb|GL891954.1| GENE 21 21215 - 22123 753 302 aa, chain + ## HITS:1 COG:VC2094 KEGG:ns NR:ns ## COG: VC2094 COG3782 # Protein_GI_number: 15642094 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 58 268 12 241 257 63 28.0 4e-10 MNIASIKTSYFEPWLQFSHPMVRQLAFTIASPNLLSQLPCSLTIRHSFQLHTDKNWEQHF QNYLPRLKQLDEAPEPLLQFMSRLKSTRLGLRFENLLWFWLQEDQYHPYQLLGHSIQKID GAKTLGELDFLVLNQNTQEIEHWEVALKYYLGEGQLNLEQWIGLNRQDTLSKKLYHFTDK QFQFSEALGFKVQQRFAVLKGQLYLPLNLPQEQLIPEWVNLKRRLGTWGTEIPKSDFYRL ERHEWLCPHQKASSNTAYWWTDGLYCQNINETRFYMFRHPALLSLKPSLIKNNGILQETT SL >gi|333032472|gb|GL891954.1| GENE 22 22225 - 22365 200 46 aa, chain + ## HITS:1 COG:no KEGG:AB57_3306 NR:ns ## KEGG: AB57_3306 # Name: not_defined # Def: entericidin EcnAB # Organism: A.baumannii_AB0057 # Pathway: not_defined # 1 46 1 46 46 69 100.0 4e-11 MKKVLVASVMVAFVLTGCNTFKGFGQDVSKAGDAVTNTAQKTENKM >gi|333032472|gb|GL891954.1| GENE 23 22491 - 23627 1192 378 aa, chain + ## HITS:1 COG:NMB1530 KEGG:ns NR:ns ## COG: NMB1530 COG0624 # Protein_GI_number: 15677382 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Neisseria meningitidis MC58 # 1 377 1 377 381 497 62.0 1e-140 MNHSDTLSLSLELLQQPSVTPIDHTCQTIIAERLAKVGFHIEPMRFGDVDNLWARRGTEG PVFCFAGHTDVVPTGRLDAWNSDPFAPEIRDGKLYGRGSADMKTALAAMVVASERFIAKH PNHKGSIAFLITSDEEGPAVNGTVKVIETLEKRNEKITWCLVGEPSSTHKLGDIVKNGRR GSLNAVLKVQGKQGHVAYPHLARNPIHEASPALAELCQTVWDNGNEYFPATSFQISNIHA GTGATNVIPGALEVTFNFRYSTEVTAEQLKQRVHEILDKHGLQYEIVWNLSGLPFLTPVG ELVNAAQTAILNVTGTETELSTSGGTSDGRFIAPTGAQVLELGVLNATIHQINEHVDVHD LDPLTDIYEQILENLLAQ >gi|333032472|gb|GL891954.1| GENE 24 23663 - 24127 529 154 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03058 NR:ns ## KEGG: ACICU_03058 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 154 1 154 154 294 100.0 9e-79 MKGSVNTSLIANMDQQELQHLITVSTGFIDAYIIECNDQVPMLLPQNIVLSAMDVKNGVK HIEWHDVKLPVYSVHNTIDQHAVALVIEGEDISQRFALICKTMPVSTRLRISEIVDEMDE HEAEQHPAVFKYVRMQDQRYYIPNLEYIEKLLGL >gi|333032472|gb|GL891954.1| GENE 25 24124 - 28644 4135 1506 aa, chain - ## HITS:1 COG:PA0413_2 KEGG:ns NR:ns ## COG: PA0413_2 COG0643 # Protein_GI_number: 15595610 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis protein histidine kinase and related kinases # Organism: Pseudomonas aeruginosa # 894 1374 982 1463 1468 432 49.0 1e-120 MKEILKTLTEAMTLPEDSYSEQDAEFLEIFIEEIEEIFVDLQPLINKWMQSENIATLTEI RRHFHTLKGSGRMIGAKSSAELAWTVEDTLNRVINQSLQLTPTIQSYVQLVFKFYFLKLV DNFKQKRAHTLDFRPLILLGQQLQQQQSLEPALEELLQLSNTLTAETVTGLELDYIEQDS LAEPIIQATHTEIEINLDETLTLFMEEAEEHLATIHQFLDQELHQYDSYNALIRALHTLR GSSAMAQVETIFEASTKVEHLFKILLQEELSSHSEEILLLQEYREFVRDSLELLSRYSSS EQLEARLQQFNQSWDAYVEQHGDRTDPLMPSHGLVSQLLQLDVSELLDAELDFEKGIRNE FPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYEVLLDKPTLLQSDYIFEIYQKA HQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTQYTPDLSNDLPQQDSTSFEPISNIEQ EPEVVATVENFSDSVDWAVLGQSVQQDRQYISSTQVNRNFDADLLDIFLEEAEELLEGID TDLNIWVGEQENFAALNNLMRYLHTLKGGANMVQATYLGLIAHELESIYERLIQKQLVAT SDLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRAGQNSNFQPLPVVEAFDTESE IFSEQEVISEVIIDEIPVELEPALAELETHHDQVFDTAATELATPVEVITSVTSQESEIA ADEQDIEAVVEQTFLEEATELLEMAESLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVG LEAVQAIAYQLENAFEQFALHHFNSNIYDHLLESAIAWLKDAIFNHNYQHFDGLQQSLEN IQFFETTIQIPTKLTRADLFNSEPVMTFIQGDGTEPPPMMGAWEQTERLDQNNEMIRVSA DLIEKMIDLSGENSINRSRIEMDLSQFSHTLVEMELAIQRLADQLRRMEGELETQIIAKH GIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSDKIRDTESLLLQQSRIQ AEIQEGLMRTRLVPFSRLLPRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPL EHMLRNAIDHGLEDRMQRQQANKPETGRIELNIQRQGTDVVVVFSDDGQGIDVEKVRQKA LLAGLIKPEQDLEQQDILQLIFHPGLSTAEQVTQISGRGVGLDVVQSDIKSLGGHVSVES VYGQGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIIRVSPASLEQYFESPQELF EYENKRYPLRYLSEFVGNQPIPRLNGVMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVV KPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTQRHKQLSEAVYRHRESDERR LIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFE VLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAS DSEVKS >gi|333032472|gb|GL891954.1| GENE 26 28791 - 30869 2250 692 aa, chain - ## HITS:1 COG:PA0411 KEGG:ns NR:ns ## COG: PA0411 COG0840 # Protein_GI_number: 15595608 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Methyl-accepting chemotaxis protein # Organism: Pseudomonas aeruginosa # 51 692 27 677 682 501 52.0 1e-141 MGFKLKKKSGNRGATGKSSVNFIAKIQSKIEQFASLFGESEKSKPILYAALLCLVCALIS LAYLFYNVPRHNQLIRSLGELRLLSQTISKQATEATESGSQEAITKLQQSKKDFDENLLE IENIHGKSTDEYQKVEKIWGEVSKNIDLISSHQRVLNQLYDTNISISETVPEIQAEYNLM VDQMARQGLPSSQVIIAKNQVFIAERILRSINSVLSGTDGNVSTSDFSVDIETFGTYLNA ELNGNAELGVDRIADPALRESLESIKSEYDKVLKSAAATVLKNGSQIVNVRQASSQIFSK SDVMLESLGHLSDVARKNWLTLFLGAVLILSLGGLIFSVFKLITLRSVMDKQRVARLQEE YDRNQNAILRLLDEIADLADGDLRSYATVSEDFTGAIADSINFAIDQLRDLVSRIHETSQ EVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQ IASNGAQVVNRSIEGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILALN AAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVKTIQTDTNEAVISMEQTTTE VVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQT TTATFDTARSVSELANMAESLRESVTDFKLPD >gi|333032472|gb|GL891954.1| GENE 27 30916 - 31452 170 178 aa, chain - ## HITS:1 COG:PA0410 KEGG:ns NR:ns ## COG: PA0410 COG0835 # Protein_GI_number: 15595607 # Func_class: N Cell motility; T Signal transduction mechanisms # Function: Chemotaxis signal transduction protein # Organism: Pseudomonas aeruginosa # 24 173 29 177 178 136 42.0 2e-32 MAANGFIELLRLSKRGNKNYASVQNEAQRWSGIAFEMRGQYFVAPLGEVSEVIYPPKYTP VPNTQSWVKGLANIRGRLLSVSDLAHFISGQRSSFSSTQKVLCISHHDQYVGLVVDQVLG IQHFNKKSFFSESLDLEENLKEYCQGYFHQHNQHWHVFLFSRLLQNPHYMNASTKFIN >gi|333032472|gb|GL891954.1| GENE 28 31513 - 31875 465 120 aa, chain - ## HITS:1 COG:PA0409 KEGG:ns NR:ns ## COG: PA0409 COG0784 # Protein_GI_number: 15595606 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Pseudomonas aeruginosa # 1 119 1 119 121 158 64.0 3e-39 MARILIVDDSPTETFRFKEILTKHGYDVLEASNGADGVTLAKAEQPDLVLMDVVMPGVNG FQATRQITRDEDTKHIPVVIVSTKDQATDRVWGKRQGAIDYLIKPIEEKQLIDVIKQFLN >gi|333032472|gb|GL891954.1| GENE 29 31899 - 32282 484 127 aa, chain - ## HITS:1 COG:PA0408 KEGG:ns NR:ns ## COG: PA0408 COG0784 # Protein_GI_number: 15595605 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Pseudomonas aeruginosa # 1 127 1 127 135 195 74.0 2e-50 MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIM MPRLDGYQTCALIKNSQNYQNIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNA IRNHVSS >gi|333032472|gb|GL891954.1| GENE 30 32565 - 33203 516 212 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03064 NR:ns ## KEGG: ACICU_03064 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 212 1 212 212 352 100.0 7e-96 MNKRMKYAFYRNCLSVFIGIASCGALFFSSPTLAANAAPKAVWYRYYDQHGIANISTSVT PAHIRYGYEALDQNMQVIKRNHPYNSEADLNQSSQRALSARYREEDNKLKRAYSNSKTAT IKRDQALLAIKKQINYQQDQLSQLQQDKILFKRQEMEYFRKGEQVPERHKTLIENNLMNI NKVKQTLEILSKTYNRTNKDYENIIERLKKLE >gi|333032472|gb|GL891954.1| GENE 31 33263 - 34381 1169 372 aa, chain + ## HITS:1 COG:SMa0876 KEGG:ns NR:ns ## COG: SMa0876 COG0845 # Protein_GI_number: 16262934 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Sinorhizobium meliloti # 42 366 39 364 367 96 23.0 8e-20 MRTTHLTPSTFFKLSLISLSLILAACNQQEVPKTTASEPKKIELIPQDLIPVKEGSLAAQ TAFTGTIRAVQQSSIQAQVSATATAVTANVGQKVQKGQVLVRLNNQDNAARLAQAQANLA SAQAQAELARNLMNRKQRLLNQGFIARVEFEQSQVDYKGQLESVRAQQANVDIAKKADRD GIITSPISGVITKRQVEPGQTVSVGQTLFEIVNPDQLEIQAKLPIEQQSALKVGSSIQYQ IQGNSKQLHAILTRISPVADQDSRQIEFFASPKEAIDSLSIGAFINGIILHNDSNQGQTI PLDSIQNLQHDPFVWVIRNQTIQKVKIRVVEQRYNENIALVQGLQSTDQVSRIQFEDSDI NKKVTLTTEKNK >gi|333032472|gb|GL891954.1| GENE 32 34397 - 37495 3379 1032 aa, chain + ## HITS:1 COG:SMa0875 KEGG:ns NR:ns ## COG: SMa0875 COG0841 # Protein_GI_number: 16262933 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Sinorhizobium meliloti # 1 1017 1 1019 1065 854 45.0 0 MWFTRISVKYPVFTIMMMLSLMVLGLASWKRMTVEEFPNIDFPFVVVTTQYAGASPEAVE SDITKKLEDQINTISGIKQITSRSSEGLSMVIAEFNLDTSSAIAAQDVRDKIAPVIAQFR DEIDTPIVQRYDPSSSPIMSVVFESNSMSLAQLSSYVDKKIVPQLKTVSGVGNVNLLGDA KRQIRIKVHPEQLQSYGIGIDQVINTLKNENIEVPAGTLQQKNSELVVQIQSKVIHPLGF GDLVIANKNGSPIFLKQVATVEDTQAELQSSAFYNGRTAVSVDILKSSDANVIQVVDKTY QTLEKLKAQMPAALNYKVVADSSKGIRASIKDVVRTIIEGAVLAVLIVLLFLGSFRSTVI TGLTLPITLLGTLTFIWAFGFSINMMTLLALSLSIGLLIDDAIVVRENIVRHTELGKDHV TAALDGTKEIGLAVLATTLTIVAVFLPVAFMGGLIGRFFYQFGVTVSTAVLISMFISFTL DPMLSAHWKDPVKKKESRLQRFFNYISNLLDGLTHIYEKLLKLALRFRFITVIIAIVSLV VALGLSKMIGTEFVPTPDKGEIRIQFETPVDSSLEYTQAKLHQVDQIIRQFPDVVSTYGV VNSEVDSGKNHAGLGVTLKPKQERSADLTTLNNEFRDRLQSVAGIRVTSVAAAQDSVSGG QKPIMISIKGSDLNELQKISDRFMAEMEKIDGVVDLESSLKEPKPTLGVHINRVLASDLG LSVSQIANAIRPLIAGDNVTTWEDRDGETYDVNIRLNENKRVLPQDVQNLYLNSNKTNAN GQNILVPLSAVATTQEKLGASQINRRDLEREVLIEANTSGRPSGDIGQDIDKMQKAFKLP AGYTFDTQGANADMAESAGYALTAINLSIVFIYIVLGSQFNSFIHPAAIMASLPLSLIGV FLALFLFRSTLNLFSIIGIIMLMGLVTKNAILLIDFIKKAMEDGISRYDAILQAGKTRLR PILMTTSAMVMGMVPLALGLGEGGEQSAPMAHAVIGGVITSTLLTLVVVPVIFTYLDDLK NFMLRQTRRFMS >gi|333032472|gb|GL891954.1| GENE 33 37554 - 39269 2369 571 aa, chain + ## HITS:1 COG:HI0729 KEGG:ns NR:ns ## COG: HI0729 COG0442 # Protein_GI_number: 16272670 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Haemophilus influenzae # 1 569 1 565 572 796 68.0 0 MRASRFLFATLRETPNDAEVISHQLMLRAGMIRKLASGLYTWLPMGTRVLKKVDAIVREE MNRSGAMEVFMPVTQPASLWEESGRYEQYGPELLRFKDRHDNPFVLGPTHEEVITDLARN ELKSYKQLPVNFYQIQTKFRDEIRPRFGVMRSREFIMKDAYSFHATQESLQETYDVMYDT YSRIFTRLGLDFRPVQADTGSIGGSASHEFHVLAASGEDDIAFSTESDYAANVEMAEAVL VGERAAPTQEFKLVETPNQKTIADVCQFLNADPKQSVKALLVQGVADEKGNVPVVALFLR GDHELNEIKAEKHPLVAAPLAFATEEQLQAFGLTAGFTGPQGLVEKGITVIVDRAASVLS DFVAGANEADKHAVGVNWERDAQITEVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQL GTKYSEALGCKVLGEDGKPFTVTMGCYGIGVTRVVAAAIEQNYDDKGIIWPQAIAPFEIA IVPMNAHKSPRTLEAAEALYAELQAQGFDVLLDDRNERPGVKFSDLELMGIPHRIVIGEK GLDAGTFEYKGRRDAEASNLTKEELLAKLAR >gi|333032472|gb|GL891954.1| GENE 34 39324 - 39665 365 113 aa, chain - ## HITS:1 COG:ECs2888 KEGG:ns NR:ns ## COG: ECs2888 COG3422 # Protein_GI_number: 15832142 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 1 110 14 123 123 126 65.0 1e-29 MAGWYEITQANDGQYRFVLKAGNGEIILNSELYKAKASAVNGIESVQKNSSDDARYDRLT AKNGKPYFNLKAANHQIIGSSQFYASEASRDKGIESVKNNGSSTTIKDLTVQV >gi|333032472|gb|GL891954.1| GENE 35 39877 - 40221 356 114 aa, chain - ## HITS:1 COG:STM4289 KEGG:ns NR:ns ## COG: STM4289 COG2824 # Protein_GI_number: 16767539 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism # Organism: Salmonella typhimurium LT2 # 1 113 1 110 111 152 66.0 1e-37 MSLPNCPKCQSEYTYQDGDLLICPECSHEWKEGEALVTEEQEVIKDANGNVLADGDSVTV IKDLKIKGSSSVVKVGTKVKSIRLVPDASDGHNIDCKIDGIGQMKLKSEFVKKA >gi|333032472|gb|GL891954.1| GENE 36 40312 - 40668 435 118 aa, chain - ## HITS:1 COG:mll7394 KEGG:ns NR:ns ## COG: mll7394 COG3189 # Protein_GI_number: 13476151 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 2 118 4 120 120 116 53.0 8e-27 MDIQIKRIYDDVSGDDGKRILVDRLWSRGISKENAHLDLWLKEIAPSTELRKWFHAESAE HWDEFKQRYLKELETNPAVKELLEIVSHHKVTLLYSAKDVEHNHAIILKEYLLEKSKS >gi|333032472|gb|GL891954.1| GENE 37 40811 - 41260 455 149 aa, chain - ## HITS:1 COG:mlr2292 KEGG:ns NR:ns ## COG: mlr2292 COG3832 # Protein_GI_number: 13472102 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 4 146 39 181 183 203 65.0 1e-52 MATGTVKLHRVFKAPAERVYRAFLDPDALVKWMAPHGFTAKVHSFDAKVGGSYKMSFTNF STGSTHSFGGTYVELVPNELIRYNDQFDDTNLPGTMQVTITLKTVLVGTEIHITQEGIPE VIPVEACYLGWQESLSLLKLLVEADIPDQ >gi|333032472|gb|GL891954.1| GENE 38 41477 - 42199 852 240 aa, chain + ## HITS:1 COG:HI0466 KEGG:ns NR:ns ## COG: HI0466 COG0354 # Protein_GI_number: 16272414 # Func_class: R General function prediction only # Function: Predicted aminomethyltransferase related to GcvT # Organism: Haemophilus influenzae # 1 172 5 200 280 82 31.0 5e-16 MSLLAFSSYALNGVDAQKFLQGQVTVDTERLAENETRYTAICDLKGRIHFGLWLKKNNAE SFEIIVTQDQAEEFAKHIKKYGAFSKMTLSEQGAVFPKVVNGHTEFSSTETDISEWQKQA IMTGQAWIAQATEHEFQPQELRLHQREGVNYDKGCYLGQEIVARLWFKAKPKHWLHLVQG TGDSPAPATQLHNDVEVVNSTQTTDGYIALVVAKPAALQELGLQVLDLPEALSGDVARPQ >gi|333032472|gb|GL891954.1| GENE 39 42345 - 43055 636 236 aa, chain + ## HITS:1 COG:NMA0730 KEGG:ns NR:ns ## COG: NMA0730 COG1651 # Protein_GI_number: 15793706 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Neisseria meningitidis Z2491 # 24 233 46 257 260 191 43.0 7e-49 MKTKLATLMLSLAFFGSAHADVKTLEQNLKTNYPDLPVKGVYQSPVAGIYEVYTSGRIVY TNQDAKYFFVGNLVDIKQQKNMTEERIAELGKIDVKSLPLNQAIKYVKGKGERTLYIFSD PDCPYCQRLEQNMVGVDNVTVYVFLYPLTSLHPNAEKVSNQIWCSKNPSEAWTNYMLNRK LPAAGKSCTSPIQKNIALGQKLNIDGTPTLFLQDGQRISGVPSDAKQIEALLQSVK >gi|333032472|gb|GL891954.1| GENE 40 43238 - 44062 871 274 aa, chain + ## HITS:1 COG:ybeQ KEGG:ns NR:ns ## COG: ybeQ COG0790 # Protein_GI_number: 16128627 # Func_class: R General function prediction only # Function: FOG: TPR repeat, SEL1 subfamily # Organism: Escherichia coli K12 # 41 256 115 327 327 62 27.0 1e-09 MKKLLIASLIAISSSSIFAADTTASAAKNDVFKQAEQLYAAKNYPAAFQEVQRLAQTGNA QAIYNLGYMTQMGQGTAKDNAKALKYYEDASNKGYAQASYTLAQLYETGELGVAKDSNKF SQYIQKASAQGSDDATVKIATILFAQKKPQSHQIALQKLAPLIRKGNYPAIQVKALYDIS QGVENKNPLMKRQGIEALQTIAQKGYAPASMALATMMANGNIIPQNLPQAKQIFTELAKQ NVPNARESLASVEKIIAEKNKQAAAAPMQPAPKK >gi|333032472|gb|GL891954.1| GENE 41 44097 - 45020 693 307 aa, chain - ## HITS:1 COG:AGc3303 KEGG:ns NR:ns ## COG: AGc3303 COG0679 # Protein_GI_number: 15889099 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 2 303 4 306 312 90 24.0 4e-18 MVFQVILPILILLLMGYCSVLIKLVTPEQIKALSAFVIKISLPAFLIQSLANKNLQDIWH PAYFIAYGGGSLILFFLAFILYRKYFKNSLTHSAVISMGASMSNTGFMGTAILTMLMGSH AAIYISLTLIIENLLIVALMLILAEAGLHQQQRLLPLLKKTFMNLLKNPVIIAILVGMSC ILLDIHLPSKLGQALELLGRTASPLALFAIGGSLVGIGITAVNFQSILLAGFNVILMPVV IFGLFLLLPNVSQEMLYAGTLLAALPMPIAFGIFGQAYGLNERALTPLMISTIIGFMGVS GLIALWW >gi|333032472|gb|GL891954.1| GENE 42 45085 - 46194 1376 369 aa, chain - ## HITS:1 COG:RSc0702 KEGG:ns NR:ns ## COG: RSc0702 COG1902 # Protein_GI_number: 17545421 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Ralstonia solanacearum # 1 366 1 362 370 337 48.0 2e-92 MAKLFETVNFDSLQLVNRIVIAPMCQYSATDEGEITYWHEQQWANYALSGAGLCIVEATA VQAEGRISYADLGLWNDQQRDQIKTLLGKVKTLSPMPFGIQLAHAGRKASTEKPWLGKGQ IAKDQPHGWQTVAPSTSTFSVHDAAPHALTIAEIKQIQQDFAAAAKRAVEAGFELIEVHA AHGYLLHQFLSPIANQRTDEYGGSLENRMRMTLEVLQAIKLAVPEGYPVGVRLSATDWMD GNEQWDIESTVGLSKALEQLGAAYIHVSSGGLHEHQNITIGAGYQVPFAEQVKKHVAIPV IAVGLITDPQQAEQILENQQADAIGLARAMLYAPRWPWHAAATLGAKVKIAPQYLRCQPH GLKQLFDSF >gi|333032472|gb|GL891954.1| GENE 43 46204 - 48333 2179 709 aa, chain - ## HITS:1 COG:ECs2055 KEGG:ns NR:ns ## COG: ECs2055 COG1629 # Protein_GI_number: 15831309 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Escherichia coli O157:H7 # 20 709 16 699 700 608 47.0 1e-173 MSLLRLDRLHYCILMSMGCISSPLVWAEDLNSDVAQLPTLHVEATRTDTGYLQTPASVFR IEAPQVDSSSQVNLTEVVKGIPSLQIRNRENYAQDLQLSMRGFGARSTFGVRGIRLYVDG IPATMPDGQGQTSNIDLSSLDHVEVLTGPFSSLYGNSSGGTILTSTKEGQGKDSIELSYS GGSHDKSRAGLVLQGGAKGANEPSYIISSSYFDTDGYREHSGAEKVLNNAKLSWNLDDGS KINWVTNYVKIHADDPQGLTHDQWNANPKQQVPFLKQFNVRKDIEQTQTGVTWSKPINDK NELYAMAYLGNRQVTQYQSIPKSTQDASINHAGGVIDFERNYYGADFRWTGKELLPNTTL SVGVALDAMDEDRKGFENFNLVNGQPSYGVKGNLRRDEDNTLWNIDPYLQASWQFLPTWR LDTGVRYSNVHYKSEDNYLSNGDDSGKTDYDKVLPSVALSWQILPELMAYVSYAKGFETP TFTEMAYRPDGQSGFNFDLTASTSDTYETGLKSQNQLGDFTLAVFQTKTKDDIVSAGNSN GRSTFRNADKTLREGVEFAWNKKLWRDLIATASYSYLDATFDADIPALGNIAQISSGNAI PGIAKNQAYASLAWQPSHGLYGGVDVQYMDKVYVNDTNSDAAPSYSVTSANVGYAWVMGD WKVNSFARVDNLFDKKYVGSVIVNDGNSRYFEPADGRNWSAGLRVIKQF >gi|333032472|gb|GL891954.1| GENE 44 48466 - 49032 459 188 aa, chain - ## HITS:1 COG:BB0422 KEGG:ns NR:ns ## COG: BB0422 COG2094 # Protein_GI_number: 15594767 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Borrelia burgdorferi # 9 188 5 185 186 120 40.0 1e-27 MSDILPLSWFQRETSEVAYDLIGCVLCKRQPDGQVIRCTISETEAYLGVRDKACHSYNDK RTARTEVMYRHGGTIYVYLIYGMYEMLNIITQTEGVPEGVMIRSAFLNSASTKKEYKLLA GPGKLTRYLGIDRTLKGQTLGEESGLWIEAATTQPEVVLTPRIGIDYAEEAKDWPERYCW KDHPSLSR >gi|333032472|gb|GL891954.1| GENE 45 49108 - 49932 701 274 aa, chain + ## HITS:1 COG:PA0357 KEGG:ns NR:ns ## COG: PA0357 COG0266 # Protein_GI_number: 15595554 # Func_class: L Replication, recombination and repair # Function: Formamidopyrimidine-DNA glycosylase # Organism: Pseudomonas aeruginosa # 1 266 1 269 270 261 48.0 1e-69 MPELPEVETTKTSLFPLLNQKVLSVEVRNPSLRWPIPDNVQKLVGQRLIGLNRRSKYILA EFEQDQMLWHLGMSGSFRLCQPNDELRKHDHLIIQFEDQQLRYHDPRRFGCILWLNPETQ GKLIDTLGPEPLSTDFHAEYLAFKLKNKSVGIKIALMDNHVVVGVGNIYATESLFNVGIH PAQPAGDLTMQQIEKLVVEIKRILKSAIDLGGSTLRDYSNAMGENGYFQQTLLAYGRAGE MCVNCETTLENLKLGQRASVFCPQCQPLKKLRKP >gi|333032472|gb|GL891954.1| GENE 46 49952 - 50242 337 96 aa, chain + ## HITS:1 COG:PA1996 KEGG:ns NR:ns ## COG: PA1996 COG0760 # Protein_GI_number: 15597192 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Pseudomonas aeruginosa # 1 91 1 91 92 107 61.0 6e-24 MQTAIVRHILVKDKDLAEQLKKKLQSGADFAKLAKQYSTCNSAKRGGELGEVKKGQLVPV IDKVVFTAAERVLQGPIKSQFGYHLLEVKFRMTGLR >gi|333032472|gb|GL891954.1| GENE 47 50253 - 50714 428 153 aa, chain - ## HITS:1 COG:PA4164 KEGG:ns NR:ns ## COG: PA4164 COG2105 # Protein_GI_number: 15599359 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 37 142 1 106 108 96 39.0 2e-20 MYRFLLHSILYWTRDIDKLAKSQLSLAKQIEQGHKLMNQLFVYGTLCPNKANAHILEQIG GNWTKASVRGVIHILDWGPDKGLKALELDPEADWVEGYLFSTEKLAENWQMLDDFEGFQY QRVTADIKLESGEYVKAWTYQINMQAKAPHNYK >gi|333032472|gb|GL891954.1| GENE 48 50748 - 51179 653 143 aa, chain - ## HITS:1 COG:BMEI1605 KEGG:ns NR:ns ## COG: BMEI1605 COG1970 # Protein_GI_number: 17987888 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Brucella melitensis # 3 142 7 141 144 139 57.0 1e-33 MSIIQEFKEFAIKGNMMDLAIGVIIGGAFGKIVDSLVKDIIMPLITVITGGGVDFSQKFI VLGANPNNLQSLDALQKAGINVLTYGNFLTILINFLILAWVVFLMVKLLNKLRRDKNEPE APAATPEDIQLLREIRDELKKQA >gi|333032472|gb|GL891954.1| GENE 49 51435 - 53270 2163 611 aa, chain - ## HITS:1 COG:PA5117 KEGG:ns NR:ns ## COG: PA5117 COG1217 # Protein_GI_number: 15600310 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Pseudomonas aeruginosa # 4 607 2 599 605 882 72.0 0 MSDIKNLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSNALESERGITILA KNTAITWLDKRTDTTYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFV TQKAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGATDEQLDFPIVYASGLRGVA GPAPEELAEDMTPLFETIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVK LNTPVTVIDKEGNTRNGRILKIMGYHGLERIDVDSASAGDIVCITGIDALNISDTICDPK NVEALPPLSVDEPTVSMTFQVNNSPFAGKEGKFVTSRNIRERLDRELIHNVALRVEDTDS PDRFKVSGRGELHLSVLIENMRREGFELGVSRPQVIIKEIDGEKQEPYENVTFDVEEQHQ GAVMEQMGHRKGEMTNMEVDGKGRIRIEATVPSRGLIGFRSEFLTMTSGTGIMTSSFSHY GPLKQGTVAKRQNGVLISMVQGTCLGYALFSLQDRGRLFAKPQLEVYEGMIVGINSRSDD MVVNPTKAKQLTNVRASGTDDALTLTPAIEFTLEQALEFIEDDELVEVTPKSIRIRKRYL TENERKRNRDK >gi|333032472|gb|GL891954.1| GENE 50 53449 - 54807 330 452 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 29 449 20 420 447 131 27 1e-29 MSNQPSQDRLDLVYGLDDRPKPFVAFLAAFQHLLAIIVPIVTPGLLICLALGVPRNETNM ILSMSLVISGIATFLQCKKVGPFGAGLLIVQGTSFNFIGPIIGIGSAMVAAGTPVNQVMA AIFGVVIAGSFIEMGVSQILPWVKKLITPLVTGIVVLLIGLTLIKEGLISMGGGYQAMQD HTFASADNLIMSCTVLAIIIVLNRIRIVWIKSSAILIALVIGYILAGFMGYLDFSGLKDA PVIQIPTPMHFGLSFSWGLFIPMAFIYLVTSLEAIGDVTATSKLSNQPVDGPQWMQRIKG GVLVNGANSLLAGLFNTFPSSVFAQNNGVIQLTGVASRYVGIWIAALLILLGLFPAVAGV IQAVPQAVLGGAVMVMFGAVAASGINILSSIHLDRRALLIIAISLALGLGVAQVPQILEH LPELFKNIFSSGVATGGIAALILNVVLPETHK >gi|333032472|gb|GL891954.1| GENE 51 54870 - 55883 618 337 aa, chain + ## HITS:1 COG:PA4627 KEGG:ns NR:ns ## COG: PA4627 COG2813 # Protein_GI_number: 15599823 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Pseudomonas aeruginosa # 1 335 1 329 332 276 43.0 5e-74 MDPRSEVILRQHDYLKGRVLLINAPNDALVSQLPTEIDASVWTWNYADYQGFLNAGATAH FSVEFPLQEFDQAIIFVPKSKELLNYILHVVMSHLKIDQSVFLVGEKKGGVERAAKQLQS FGKILKLDSARHCQLWHLKIEKTEKIKPLESWLKTYTVQVNEQELTICALPGVFSQTHLD VGTAVLLPYLNQVKSGRIADFGCGAGIISCYLAKANSSNIIHALDIDAFALQSTEMTFSR NGIGSDQLRLQPVTGIADAPTELDAIVSNPPFHQGIHTNYDASEGLCQNAKKHLKASGEL WIVANRFLNYPILIEKHFGQCEIKTDLQGFKVLYACA >gi|333032472|gb|GL891954.1| GENE 52 55905 - 57365 1687 486 aa, chain + ## HITS:1 COG:PA4628 KEGG:ns NR:ns ## COG: PA4628 COG0833 # Protein_GI_number: 15599824 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Pseudomonas aeruginosa # 4 483 6 484 487 641 66.0 0 MSETHAPEKLQRKLGARHLNMIAIGGSIGTGLFLASGSTIANAGPGGALLAYSLIGIMIY FLMTSLGELATHTPTSGAFFTYGSRYVEEGFGFALGWNYWYNWAITVAFELVAVQFIMKF WFPDVPGFYWSALFLVIIFMINAMTVKGFGESEFWFSMVKVIAIVAFIIIGIAMIIKIML TPGVATFGNWTYKEAPFVGGLQAMIGVAMIAGFSFQGTEMVGVAAGESKDPKKTIPLAIK QIFWRILLFYILCIFIIGTLIAYDDPNLLQAAATENIALSPFTLLYEKVGFAFAASLMNA VILTAILSAGNSGMYSSTRMLFDMAQQGRAPKWFAKLDNRGVPMNALYATTFIAAFCFLT TFIGEKQVFNWLLNMSGMCGFIVWLGIAISHYRFRKGYIAQGYKLEDLAYRAKFFPFAPW FAFILCSVIILGQNYQAVLGGKIDWIGLLSTYISLPLFLVIWLGYKWKNKTKLIPYDQMD VKPEQD >gi|333032472|gb|GL891954.1| GENE 53 57642 - 58847 1216 401 aa, chain + ## HITS:1 COG:rtcB KEGG:ns NR:ns ## COG: rtcB COG1690 # Protein_GI_number: 16131295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli K12 # 16 401 12 408 408 435 53.0 1e-122 MGIQKILNEEAQYGVPVKIFTQDIDSESIEQLKKMAQLQFIYSHIAVMPDVHVGKGATVG SVIPTKHAIIPAAVGVDIGCGMNAIRLSLKASQLPNNLSRLRDAIERKVPVGFALHKQVK AKASSIIPLEKRLEPIIKKHPGLVRMLRQFEATWQKQLGTLGGGNHFIELCIDENQDVWV MLHSGSRGLGNVIGTYFIELAKKEAQHRFGHVPDKDLSYFAEGSQSFNDYVEAVEWAQEY AFENRKEMMRLILEAIRPLLPSFQMTKEAINCHHNYVSQETHFGENLFVTRKGAIRAGLD ELGIIPGSMGARSYIVKGKANPESFCSCSHGAGRKMSRSKAKVLFNQQDLIEQTQGIECR KDSGVVDEIPSAYKDIDEVIANQADLIEVVHTLKQVLCIKG >gi|333032472|gb|GL891954.1| GENE 54 58851 - 59009 125 52 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000622 NR:ns ## KEGG: ABBFA_000622 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 52 1 52 52 69 100.0 5e-11 MKIKEMPKIKVRNQVALSPLLHKGGMHETEKPRAQHRRNRQDTKQQLKKGVW >gi|333032472|gb|GL891954.1| GENE 55 59134 - 60204 1335 356 aa, chain - ## HITS:1 COG:Cj1478c KEGG:ns NR:ns ## COG: Cj1478c COG2885 # Protein_GI_number: 15792793 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein and related peptidoglycan-associated (lipo)proteins # Organism: Campylobacter jejuni # 107 333 80 314 319 108 34.0 2e-23 MKLSRIALATMLVAAPLAAANAGVTVTPLLLGYTFQDSQHNNGGKDGNLTNSPELQDDLF VGAALGIELTPWLGFEAEYNQVKGDVDGASAGAEYKQKQINGNFYVTSDLITKNYDSKIK PYVLLGAGHYKYDFDGVNRGTRGTSEEGTLGNAGVGAFWRLNDALSLRTEARATYNADEE FWNYTALAGLNVVLGGHLKPAAPVVEVAPVEPTPVAPQPQELTEDLNMELRVFFDTNKSN IKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNV DASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSRTVVVQPGQEAAAPAAAQ >gi|333032472|gb|GL891954.1| GENE 56 60586 - 61101 196 171 aa, chain + ## HITS:1 COG:XF0966 KEGG:ns NR:ns ## COG: XF0966 COG4970 # Protein_GI_number: 15837568 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein FimT # Organism: Xylella fastidiosa 9a5c # 1 168 1 166 185 59 22.0 3e-09 MFKSPGFTIVELTITLVILVIMSVIAIPLYHQFMASVELKNTPRILTIHIQKAKYDAIIR HKNVVLCPSSDQLVCNTNWDNRVISFVDNNHNLQHDLNEELLTSIDLNHHYGSMKLQRFG KKQNSIIFQGSSGLPIESNGSFIYCSYDQLKNFKLILSKMGHVRLEELKNC >gi|333032472|gb|GL891954.1| GENE 57 61210 - 62385 1421 391 aa, chain + ## HITS:1 COG:PA3925 KEGG:ns NR:ns ## COG: PA3925 COG0183 # Protein_GI_number: 15599120 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 391 1 391 391 504 70.0 1e-142 MTDIVIVNGARTAMGGFQGSLSGLTAPELGAVTIKEAIARAGLQPTDVEEVIMGCVLPAG LKQGPARQAMRKAGLPDSTGAVTINKLCGSGMKAVMQAADMIKAGSAEIVVAGGMESMTN APYVLPKARAGYRMGHGEIKDHMFFDGLEDAETGRLMGSFAQDMANTRGYTREQMDDFAI RSLKRAQTAITEGYFKDEIVPVTVSTRKGDVIVDQDEQPLNAKIDKIPSLKPAFAKDGTI TAANASSISDGASALVLTSSEVAAQRGLQPLAKIIATASNSQHPSEFTIAPVGAIEKVLK KAGWNAQDVDLWEINEAFAMVTMCPIDDFKLDPEKVNIHGGACALGHPVGSTGSRIILTL IHALKRTGGKKGVAALCIGGGEATAVAIEIL >gi|333032472|gb|GL891954.1| GENE 58 62512 - 62955 440 147 aa, chain + ## HITS:1 COG:PA1353 KEGG:ns NR:ns ## COG: PA1353 COG2764 # Protein_GI_number: 15596550 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 1 146 1 136 137 88 34.0 4e-18 MQLNHYLNFQGQAEQAFNFYKSVFGGEFAMLSRYSDMPPHDGVTLSEAQKNLVLHVSLPI NEYTVLMASDVIDQFCTPNSVFTQGNNHYIAINLEKDEQEKAKQLFDALSVNGKIEMPLE KTFWGALYGAFTDQFGVKWMVNCQLDT >gi|333032472|gb|GL891954.1| GENE 59 62998 - 63351 286 117 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03093 NR:ns ## KEGG: ACICU_03093 # Name: not_defined # Def: quaternary ammonium compound-resistance protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 117 1 117 117 177 100.0 1e-43 MFALISKINPGTWWLIFAIATDVLSTFYSAKGNGLVNKTAQGIALVLYIISFACAAIALK YMQAGILYVLWSGVGVLATAFLAKIFLGQNIDVAGWIGIGFITVGLMIIAQYSNIDV >gi|333032472|gb|GL891954.1| GENE 60 63434 - 63919 739 161 aa, chain - ## HITS:1 COG:PA1837 KEGG:ns NR:ns ## COG: PA1837 COG3749 # Protein_GI_number: 15597034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 9 153 4 157 165 89 32.0 3e-18 MLNTALPVLYKDGTIADNTYQIIAEDGVIPQGDVVLTTAQLDQLANTQGKKALYVTVNDS PEDHTFPLSELDAIFIEFAGFGDGRGYSFAALLRRQGFQGELRATGDVFKDVLNYLKRSG FDSFVIKEGKDVQEAAAGLQDFTHPYQASTAVPKASYQTGA >gi|333032472|gb|GL891954.1| GENE 61 63912 - 65555 2077 547 aa, chain - ## HITS:1 COG:PA1838 KEGG:ns NR:ns ## COG: PA1838 COG0155 # Protein_GI_number: 15597035 # Func_class: P Inorganic ion transport and metabolism # Function: Sulfite reductase, beta subunit (hemoprotein) # Organism: Pseudomonas aeruginosa # 1 547 1 549 552 761 65.0 0 MYLYTDFDQQLINQRVAQFRDQTERYLAGKLSEDEYRPLRLQNGLYVQRYAPMLRIAVPY GLMNSKQLRKIAEVSTQYDRGYAHVSTRQNIQLNWPALEDVPEILAELATVQMHAIQTSG NCIRNTTTDQYAGVVAGEIADPRPTCELIRQWSTFHPEFAFLPRKFKIAVSALEEKDRAA TAFHDIGVYIVRNEAGEMGYKIMVGGGLGRTPIIGSVIREFLPREDLIAYLEAVLRVYNL HGRRDNKYKARIKILVKALTPEVFAQKVEAEFEHTRETLKIQPEILKKLDEEFTPFDYQD LEDEDFTALFAEHPKFKQWFNINTHAHKVKGYRIVTISLKRAGIAPGDMTTEEMNFIADL ADKYTFGELRTTHEQNIALADVPQKDLFDVWQALEQHNMARAHIGFITDIISCPGGDFCS LANAKSIPIAEAITRRFEDLDKVYDLGHLDLNISGCMNACGHHHVGNIGILGVDKKGAEF YQITLGGNSDHDASIGDILGPSFAAEAVPDVIEEVLNTYLDLRTEGERFVDTYRRVGIQP FKERAYA >gi|333032472|gb|GL891954.1| GENE 62 65722 - 68148 2613 808 aa, chain - ## HITS:1 COG:ECs0128 KEGG:ns NR:ns ## COG: ECs0128 COG4993 # Protein_GI_number: 15829382 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose dehydrogenase # Organism: Escherichia coli O157:H7 # 8 807 3 794 796 956 59.0 0 MIDKRWFMNQPSSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIVAGVLLLIVAW QLYKRASAALWVYAALMLGTIIWSVWEVGTDFWALAPRLDILGILGLWLLVPAVTRGINN LGSSKVALSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPGVAESDWPAYGRTQ AGERYSPLKQINDQNVKDLKVAWTFRTGDFKTDNDSGETTNQVTPIKIGNNMFICTAHQQ LIAIDPATGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQTKKSTSTQCPR KVFVPVNDGRLVAVNADTGKACTDFGQNGEVNLQEFMPYAYPGGYNPTSPGVVTGSTVVI AGSVTDNYSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTTFVHNSPNAWAPLA YDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLIWNFQTTHHDLWDMD VPSQPSLADIKDKSGKTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTK GEHYSKTQPFSDLNLAPQDKLTDKDMWGATMLDQLMCRVSFKRLNYDGIYTPPSENGTLV FPGNLGVFEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAKGAGTEQGVQPMYG VPYGVEISAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKI GVPGLGGSISTAGNVMFVGATQDNYIRAFNVTNGEKLWEARLPAGGQATPMTYEINGKQY VVIMAGGHGSFGTKMGDYLVAYALPDNK >gi|333032472|gb|GL891954.1| GENE 63 68301 - 69554 1472 417 aa, chain - ## HITS:1 COG:PA3186 KEGG:ns NR:ns ## COG: PA3186 COG3659 # Protein_GI_number: 15598382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Carbohydrate-selective porin # Organism: Pseudomonas aeruginosa # 9 417 14 454 454 450 52.0 1e-126 MKTHKSLMVSCLSVLSITLFVQHAQAAAAFDPNGSWMLGDWNGQRTALQAQGYDFSFGYT GEYAGILDSKQTSTHGSAYTGQLALGSHLDLGKILGWQDTEAQITLTYRDGQSLSEHSPA LAGHQSSVQEVWGREQTWRLTDLWIKKKFLDQKLDVKVGRFGEGEDFNSFDCDFQNLALC GSQVGNWVGDQWYNWPVSQWAMRVKYNLQPDLYTQVGVYEYNPENLERGKGFNLSTDGSH GAIIPAEVVWSPKLGVQSMPGEYRLGYYYSTADAKEIADSTKTSHKQGVWVTAKQKLFQP ADQTDRGLTGFVNLTFHDSDTNKVDNMQNIGLVYKGLLNQRPQDELALGVARIHINDDWN DVQAKEYDTEYNTELYYGIHATNWLTIRPNVQYVRHVGALKNGDNTWVGGIKFSTAF >gi|333032472|gb|GL891954.1| GENE 64 69689 - 70807 1244 372 aa, chain - ## HITS:1 COG:PA1188 KEGG:ns NR:ns ## COG: PA1188 COG1804 # Protein_GI_number: 15596385 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Pseudomonas aeruginosa # 1 368 1 366 393 407 54.0 1e-113 MTTALNGLKVLDFSTLLPGPFATMYLADMGAEVIHIESPSRPDLIRIMPPYANGQATAHS YLNRNKQSIVLDLKDAASIDLIKAKISEFDIVIEQFRPDVMRRLGLDYATLAEINPRLIY CSITGYGQTGSYKDRAGHDINYLALAGIAGYSGRQDSGPPPLGIQVADIAGGSLHAVIAI LAAVVERSRSGIGQYIDISMTDCVASLNSMAASATLAAQVEQAPEQGMLNGGIFYDYYMT QDGRYLSIGSLEPQFMAGLSAALDLPVLLQKGASLDEQDRQEVKQAIQEKIKAKTFKEWH EIFANLDVCVEPVLSLSEALNSPLAQQRGWIVNVPLQNNTPDTEPQIACPIKFSRSQMRY SFVGQKLGEGQW >gi|333032472|gb|GL891954.1| GENE 65 71018 - 72028 1024 336 aa, chain + ## HITS:1 COG:PA1182 KEGG:ns NR:ns ## COG: PA1182 COG2207 # Protein_GI_number: 15596379 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 1 331 1 329 333 300 49.0 2e-81 MSRDTISIHFVNAALTGVKRLGMDVETLLSHVGIEAELLRQPKARISPEQYTRFIKMLWM VTQDEHVGFDVQPRRLGTFAIMCQLIIHAKTLGQALELSSQFYKLFGDEWSVTLERDKHE ARLVPLIPKTLDPDHFITESMLMIWHGLASWLIERRLPLERVHFSYPRPAHADEYDALFF APVMQFDAPRTEITFAADYLDLPIRQDEKTLEEFLKAAPAQLLVKFKNTNSLTSRIREVL KSQIGEEMPTLNDVASMLYLSPQTLRRRLAAEGKSYQGVKDALRRDAAIHLLLNPELTLE DVAQQVGFSETSTFHRAFKKWTGVTPGLYRQLHGYH >gi|333032472|gb|GL891954.1| GENE 66 72200 - 73405 1622 401 aa, chain + ## HITS:1 COG:PA1736 KEGG:ns NR:ns ## COG: PA1736 COG0183 # Protein_GI_number: 15596933 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 401 1 401 401 566 71.0 1e-161 MSEAYIIDAIRTPRGKGKKDGSLYEVKPITLLTTLLNELQQRHQLDTTKVDDIVLGCVTP IGDQGGDIAKTAAIAAGWNDDVAGVQINRFCASGLEAVNMAAMKVRSGWEDLVVAGGVES MSRIPMGSDGGPWALDPETNLKSSFVPQGVGADLIATLDGYSREDVDNFAVKSQQKAAAA QANGYFDQSVVPVKDHAGIVILEKDEFIKGNTTLEGLAKLNPSFEMMGQMGFDAVALQKY PEAQKVNHVHHAGNSSGIVDGAALVLLASEKAVKEQNLKPRAKVLATALVGTDPTIMLTG PAPAARKALEKAGLTIDDIDLFEVNEAFAAVVMRFINELNVPAEKVNVNGGAIALGHPLG ATGAMILGTLLDELERQNKKRGLATLCVGGGMGIATIIERV >gi|333032472|gb|GL891954.1| GENE 67 73426 - 75561 2630 711 aa, chain + ## HITS:1 COG:PA1737_2 KEGG:ns NR:ns ## COG: PA1737_2 COG1250 # Protein_GI_number: 15596934 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Pseudomonas aeruginosa # 329 708 1 382 384 461 61.0 1e-129 MSAIQYEKNADNIVILTLDSTGQSANTMNAEFRDSLDEVTQKLKAESELSGVIFRSAKKT FFAGGDLDELIQVQPEHATDFFNMVEKLKGHLRTIETLGVPVVAALNGTALGGGWEIALS CHHRIAINDPKSKFGLPEVTLGLLPGGGGIVRMVRLLGLQNAFPFLMEGKQFGVDKAKSL GLIHDTAENEQELLDKAIAWIKANPKSQQPFDVKGYKIPGGDPKTPAVAQVLAIAPAMLK DKTKGCYPAPEAIMAAAVEGAQVDVDTALRIESRYFTQLATGQISKNMIGTFWHGLNAIK SGASRPADIAKWQATKVGVLGAGMMGAGIAYATAIKGIPVILKDVSVENAEKGKAYSQKL LDKRVSQGRMTAEKRDQILSLITATASAEDLQGCDLIIEAVFENQELKAKVTQEAEQYLA PNGVMASNTSTLPITGLAQASKDDKAFIGLHFFSPVDKMQLVEIIKGKNTSAETLAKAYD FVQQIGKTPIVVNDSRGFFTSRVFGTFIQEGMRLLAEGVHPARIEMAALKAGMPVGPLAI QDEVSLTLTEHVASETRKALQAVGKELPKTPVDEVIHTMIHELNRKGKAAGAGFYDYPEN GKKHLWEGLKRWQKDHDISEQDMIDRILFVQALDTLRCYEEGVLESVIDANVGSIFGIGY APWTGGAIQFLNQYGIDKAKKRAEELAAKYGERFTPPTLLKTKAEQKQNIQ >gi|333032472|gb|GL891954.1| GENE 68 75726 - 75980 338 84 aa, chain + ## HITS:1 COG:no KEGG:ABAYE0627 NR:ns ## KEGG: ABAYE0627 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 84 11 94 94 138 100.0 7e-32 MSDKNSSESAILGWKFVLIVGVLSAIFLGFFYLAMSNEPDYMPGAQRKAQQHEMQQKAEK STDQQTQHDNMPEMDMQEHQHSHQ >gi|333032472|gb|GL891954.1| GENE 69 75996 - 76856 954 286 aa, chain + ## HITS:1 COG:ECs5335 KEGG:ns NR:ns ## COG: ECs5335 COG4667 # Protein_GI_number: 15834589 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Escherichia coli O157:H7 # 6 271 24 290 357 164 36.0 2e-40 MTDFSRNALVVEGGGMRGAFTSGVLDAFLQQRFNPFDLYVGVSSGSTNVANYLAGQQGRT LTFYIDHSLRPEFIDYKRFFKGGDLLDLKWMWEIGEQEHPLDQQRLFASNPDFYMVLTHA KTGQAEYLRAGKDNLLNALRASSSIPVLTRHPVDIMGEPYFDGGVADALPVRWTAQQSGV KKLLVLRTRPKNYFKASSRGDQFLAKYAFKHHYGFANSLRNRCARYNASVEFVRSSNPEQ QILEVCPPPLKNMAGRLTTNPKKLRYSYEVGLETGLQAIENWNAMK >gi|333032472|gb|GL891954.1| GENE 70 76886 - 77305 492 139 aa, chain - ## HITS:1 COG:PA2631 KEGG:ns NR:ns ## COG: PA2631 COG0454 # Protein_GI_number: 15597827 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Pseudomonas aeruginosa # 3 134 5 136 141 111 43.0 5e-25 MYKVIAGSWTQFEEDAKYIREQVFIQEQGIEPKDEWDDFDSTAVHFMVYDKEQPIATARL LPQHSVGRVAVLMLYRKQGIGKILMQHIIEYARQHKLPYLKLSAQTYVTAFYEALGFKVQ GEVYQDCGIPHIDMTLALS >gi|333032472|gb|GL891954.1| GENE 71 77318 - 78205 898 295 aa, chain - ## HITS:1 COG:FN0778 KEGG:ns NR:ns ## COG: FN0778 COG0500 # Protein_GI_number: 19704113 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Fusobacterium nucleatum # 19 280 119 396 412 163 33.0 4e-40 MLNMGKKHSVTTAPTVQAHDREKQRYVQQGSAFLKELGITDEKAQIIPSMARKWKQINKF IEIFASAYEQIDAEQKELNIVDFGSGKGYLTFALYDYLQEQQKVPLITGVELRRNLVEFC QNVADKVHFNHLDFFEGDVRSYQPEKLDVMIALHACDIATDFAIHTGIRLNASMIMCAPC CHKELRPQLHSPEVLQPMLQFGIHAGQQAEMLTDTLRALLLKAYGYETKVFEFVSLEHTS KNKMILATKRKNVTQPDAKIMAQIQALKEMYGIKKQTLELLLQDQLPIENIGCKC >gi|333032472|gb|GL891954.1| GENE 72 78280 - 78528 209 82 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000603 NR:ns ## KEGG: ABBFA_000603 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 80 1 80 403 135 97.0 5e-31 MSVFSFEQEQQFFHEIKQMLNQQTFERLILSQYKGELTQLEKITFRVVELHGKKQLSALY HHTTQDVTKNYSFEDGLEQMQC >gi|333032472|gb|GL891954.1| GENE 73 78655 - 79296 517 213 aa, chain + ## HITS:1 COG:ECs3771 KEGG:ns NR:ns ## COG: ECs3771 COG1272 # Protein_GI_number: 15833025 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Escherichia coli O157:H7 # 5 212 7 216 219 153 43.0 2e-37 MSKSVLETYDPKEELFNAYSHGAGVVMAVIASVFLIIKGSYLSTAQWIGLWVYAFSLILV FTSSTLYHFAQTQNLRYWYKKLDHTAIYYLIAGTYTPFLSIAIPTQKAHILLIALWSIAA IGTLFKLVFIHRFQKISLLAYVLMGWLAVFVMDDMRTYLSKDTLMLLITGGLAYTVGALF YALKKVRYTHAIWHIFVLLGAGAHFLAIYWYVV >gi|333032472|gb|GL891954.1| GENE 74 79431 - 80741 1421 436 aa, chain + ## HITS:1 COG:SMc01869 KEGG:ns NR:ns ## COG: SMc01869 COG0477 # Protein_GI_number: 15965926 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 13 426 19 431 436 456 64.0 1e-128 MESTSATAAPVVATNSKTRVLFASLVGTTIEFFDFYIYATAAVIIFPHLFFPASSGSAAV LQSLATFAIAFIARPIGAALFGHLGDRIGRKATLVAALLTMGISTVCIGLLPTYAQIGIV APLLLALCRLGQGLGLGGEWSGAVLLATENAPEGKRAWYGMFPQLGAPIGFILATGSFLL LSAAIPEQAFMQWGWRIPFIASAVLVIVGLYIRLKLHETPAFQKVLDKQKEVNIPFKEVV TKHTGKLILGTIAAICTFVVFYLTTVFALNWGTTKLGYARGEFLELQLFATLCFAAFIPL SAIFAEKFGRKATSIGVCIAAAIFGLFFSSMLESGNTLIVFLFLCTGLSIMGLTYGPIGT VLSEIFPTSVRYTGSALTFNLAGIFGASFAPLIATKLAETYGLYAVGYYLTAASLLSLIA FLLIRETKNVDVNNQI >gi|333032472|gb|GL891954.1| GENE 75 80806 - 81249 519 147 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03109 NR:ns ## KEGG: ACICU_03109 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 147 1 147 147 167 100.0 1e-40 MKKVLQPLFLTVLAVPSFVFAAETASAPQTTTVDKVLAAKGPTSAQAVVKQENTTVISPR TGIRYTLGNTGNRPIILQTAAIAPANSANINRIVASNPALSPKSQEKAKVALIGEAAVAG AAAVAASNVTAPAVPNSVTPANPASLN >gi|333032472|gb|GL891954.1| GENE 76 81381 - 84104 3565 907 aa, chain - ## HITS:1 COG:PA4403 KEGG:ns NR:ns ## COG: PA4403 COG0653 # Protein_GI_number: 15599599 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Pseudomonas aeruginosa # 1 907 1 915 916 1077 60.0 0 MLASLIGGIFGTKNERELKRMRKIVEQINALEPTISALSDADLSAKTPEFKQRYNNGESL DKLLPEAFAVCREAAKRVMGMRHYDVQLIGGITLHEGKIAEMRTGEGKTLMGTLACYLNA LSGEGVHVITVNDYLAQRDAELNRPLFEFLGLSIGTIYSMQEPAEKAAAYLADITYGTNN EFGFDYLRDNMVFSLAEKKQRGLHYAIIDEVDSILIDEARTPLIISGQSEDSSHLYTAIN TIPPKLRPQKEEKVADGGHFWIDEKQRSVEMTEIGYETVEQELIQMGLLAEGESLYSATN LNLVHHVSAAIRAHFLFQRDVHYIIHDGEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGL AIQPENQTLATTTFQNYFRLYKKLSGMTGTADTEAAEMKEIYGLDVVIIPTHRPMIRNDQ NDLIYLNRNGKYNAIIQEIMNIRQQGVAPILIGTATIEASEILSSKLKQAGIHHEVLNAK QHEREADIIAQAGSPNAVTIATNMAGRGTDIILGGNWKAKLAKLENPTPEDEARLKAQWE QDHEDVLQAGGLHIIGSERHESRRIDNQLRGRAGRQGDPGVSRFYLSLEDDLMRIFAGDR VVAMMRAMGLKEDEAIEHKMVSRSIENAQRKVEARNFDIRKNLLKYDDVNNEQRKIIYSQ RDEILAENTLQEYVEEMHREVMQAMIANFIPPESIHDQWDVEGLENALRIDLGIELPVQE WLEQDRRLDEEGLVERISDEVIARYRQRRAQMGDESAAMLERHFVLNSLDRHWKDHLAAM DYLRQGIHLRGYAQKNPEQEYKKEAFNLFVNMLGVIKTDVVTDLSRVHIPTPEELAEMEA QQQQQAEAMKLSFEHDDVDGLTGEVTASQEALNDSATEQQTFPVPESRNAPCPCGSGLKY KQCHGKI >gi|333032472|gb|GL891954.1| GENE 77 84512 - 85153 768 213 aa, chain + ## HITS:1 COG:PA3450 KEGG:ns NR:ns ## COG: PA3450 COG0450 # Protein_GI_number: 15598646 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Pseudomonas aeruginosa # 1 212 1 212 212 349 79.0 3e-96 MTLRLGDTAPDFQQESSEGTINFYDFLGDSWGILFSHPADYTPVCTTELGYTAKLKDEFE KRNVKAIALSVDDVESHKGWINDINETQNTTVNFPIIADKDRKVSELYGFIHPNASETLT VRSLVIIDPNKKVRLIITYPASTGRNFNEVLRVVDSLQLTDKHKVATPANWQQGEDVVIV PSLKDEEEIKQRFPKGYTAVKPYLRLTPQPEQD >gi|333032472|gb|GL891954.1| GENE 78 85451 - 86227 501 258 aa, chain + ## HITS:1 COG:MT2357 KEGG:ns NR:ns ## COG: MT2357 COG0491 # Protein_GI_number: 15841791 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Mycobacterium tuberculosis CDC1551 # 18 250 68 300 310 158 37.0 8e-39 MCPVCAPLFGQKGWKAEIVCHCLLVETDRGLVLIDTGFGLQDYLHMQQRLGSLVKRLGKI EPNLEFSAIQQIQKLGFHPKDVQHIFVTHLDFDHAGGISDFPHATVHVLATEYNAAQLPN FKGKLRYRTNQYKQHRYWNFVEYQQGEKWFNLEKVKGFPLFQDEILMVPLLGHSAGHCGI AIKQQNQWLLFCGDAYYSHLELNPANKLRSLSLLEKTFAEDNEKRLINLKKLQHLAQHEP TIEIICAHDPHELRRYQT >gi|333032472|gb|GL891954.1| GENE 79 86224 - 86802 527 192 aa, chain + ## HITS:1 COG:PA3885 KEGG:ns NR:ns ## COG: PA3885 COG2365 # Protein_GI_number: 15599080 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Pseudomonas aeruginosa # 21 164 27 168 218 84 30.0 1e-16 MKKFSLIAFAVCLSLQGCMQHESIAHEHRPHDWGTLVSQTHNFYQISNDVFRSEQPDAAM IPELKHHQIGTIINLRAKASDDLVFKNENFNLVHIPINTWAIDRQDLLEVMQQIQLAKQN NQRVLLHCYHGSDRTGASVAMYRIIFENWAIDDAVKEMKQGGYGYHIIWKNIDRLFTPEN VKWIQQQLSNPS >gi|333032472|gb|GL891954.1| GENE 80 86821 - 87885 1475 354 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000595 NR:ns ## KEGG: ABBFA_000595 # Name: not_defined # Def: protein TolA # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 354 3 356 356 263 100.0 7e-69 MNNKQRWMGGVVLLGGGVLLAALLLKGNEEIKQVDVQPQTSTSPKLQAKPKQSAQEGQMV QLQPLAVDVETEKRLLEEQRRSREKAVAEQEARAAEFLAMQQQAEADAARKAAAEYAAIN ARRAAAQESSDNIPPEVAGSENKAKGQQTDTKKSVDLAKADADKKAAEAKRLAEADKKAA EAKRQAEADKKAAEAKRQAEADKKAAEAKRQAEADKKAAEAKRQAEADKKAAEAKRQAEA DKKAAEAKRKAEAEKKAEAEKARELLENGDKKWMVQVALAANQANADAVVSKLRAKGYKV TTSPTSKGIRIMVGPAKDRDTADTTRKKITSDASLNMKSAWVIDWVPLDQRKSD >gi|333032472|gb|GL891954.1| GENE 81 87882 - 89168 1075 428 aa, chain - ## HITS:1 COG:VC1001 KEGG:ns NR:ns ## COG: VC1001 COG0285 # Protein_GI_number: 15641016 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Vibrio cholerae # 2 426 3 418 421 321 42.0 2e-87 MKQQAPLSTDSLDTWLNYWSHVHVTGIDLGLERVIPVAEKLGMTKPNAKVFTVAGTNGKG STTTTLASILKAQGYKVGLYQSPHIYRFNERVKLGGVEVDDQSLIDAFVQVDQARRECDL SLSFFEATTLAAFVIFKQQQCDVWVLEVGLGGRLDVVNVIDPNIAVITNIGLDHTDWLGD TIEKIAFEKAGIIRPHIPVIFAGEQSLPQAIQDKANSSQATLYAINRDYFYKLADDGKHW YFASEGTTLRLPLGTLAIENIAGAVAAVLNSGLEISQLALEEGITNARLAGRFEVREVNG KTIIFDAGHNPHGVEFLLKQLRNFLEYNKQYTEVVAVFSMLADKDIKSVVDLLKPTVLHW KIAELNVPRAAPIQQLNDALQGQTIQQFGNIKEAFKSALEQTNNNQLILACGSFHTLEAI WEYLEECQ >gi|333032472|gb|GL891954.1| GENE 82 89165 - 90061 1049 298 aa, chain - ## HITS:1 COG:PA3112 KEGG:ns NR:ns ## COG: PA3112 COG0777 # Protein_GI_number: 15598308 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Pseudomonas aeruginosa # 44 298 30 285 290 309 58.0 5e-84 MNQEVKSGKVLSPSTPWTQRPVPGIEVADEQQTLKATFTEPTIECPECHALVTRTAISFN AYVCPQCDEHLRMKARDRLNWFFDNVVAELGQEFSAKDPLKFVDSKPYPDRMREAQTKTG ETEALIAMQGNLNGVDMIACAFEFDFMGGSMGTVVGDRFVKAAELAIEKRQPLICFAASG GARMQEGMLSLMQMARTSAAIQKLKDAGLPYIVVLTHPVYGGVTASLAMLGDIHIAEPKA MIGFAGKRVIEQTVRETLEEPFQRAEYLLDHGVVDQIVHRHALRDTVSRLVSKLMNLP >gi|333032472|gb|GL891954.1| GENE 83 90058 - 90861 572 267 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 1 259 1 256 263 224 44 1e-57 MSRLATRFEKLQSQQRKALVSYVMAGDPQPQVTVPLLHKMVAAGVDVIELGLPFSDPMAD GPVIALAAERALAAGTNTLDALNMVKEFREQDQETPVVLMGYLNPVEVIGYEKFVSYAKQ CGVDGLLLVDLPPEESKEFGAILKQHDMDQIFLLAPTSTDQRIQHVANQASGFIYYVSLK GVTGAATLDTSEAAARIEKIKGMTNVPVGVGFGISDAASAKAMGSVADAVIVGSAFVKSF ATLAADEAVEQTVNKVKELRAALDELV >gi|333032472|gb|GL891954.1| GENE 84 91106 - 92155 744 349 aa, chain - ## HITS:1 COG:PA3027 KEGG:ns NR:ns ## COG: PA3027 COG2207 # Protein_GI_number: 15598223 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Pseudomonas aeruginosa # 71 332 68 329 343 89 29.0 1e-17 MQEFTISNGYFYLWNTYLKEKGIDWQTLNLSEIQTRQVQNILSASIDAQSSLDLFIELLE ITETRLHVTNLALEMAACITPANFGVLGYMASRSDTLGQVVEYIAKFHRLVIDGAQVVPI QIEQDASKIRLYWPLVDDSNILLSELTLAAMVQLAKQIAPLHEFLLQHVEFVHRARGAVV HYQRFFQCKLSFERPYYALTFASESLNVRPQHADPTLVQLLVKQAEEALVQRKIHADLVQ QIHWIVQEYFKHKQQAPKIEDIAIELNVSVRSLQRQLQALNTSFKLILDAERMKRCEILL RQNESLTAIADQLGYSDQSALARAYKNLTGQTLLTRKKQLQLIQKNATK >gi|333032472|gb|GL891954.1| GENE 85 92276 - 93151 922 291 aa, chain + ## HITS:1 COG:PA0830 KEGG:ns NR:ns ## COG: PA0830 COG3687 # Protein_GI_number: 15596027 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Pseudomonas aeruginosa # 15 266 14 266 277 169 39.0 4e-42 MNAHVSYQVEPVVRKDLDFHLNEAPRFWFNNDPFLTRMFDALSLTFPDGERYFIECVRMF RDKIDDPELQKRVADFIKQEAQHGIAHDKMNQLMKEQGMPVDQFTTTLKKIFRFELTKRS PQYNIAMTAAAEHLTALMAETFYSHKKTLENAYPYVRALFAWHAIEEMEHRDVAFDVMKQ VGEVPESTRRFVLVLTTVLMFGFTLYRTNIMLKCDGFSPRERLLMNLKGLPWFFGKNGTL TAMKKQYMDWFKKDFHPSQHPVIRQYPVWIETLEKTNDPIAAGEAFWQAGL >gi|333032472|gb|GL891954.1| GENE 86 93160 - 94155 748 331 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03120 NR:ns ## KEGG: ACICU_03120 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 331 1 331 331 686 100.0 0 MDLIQENGQPRYGRFESVPSTIHVQRYIYKTPYGKVLKGWRKQLKYKKFKFCGIQHKHYS IGLAIADIGWVGHGFFYIYDHETGQVIEWNAIQPLGHKTYLDEQPLFNQSYFSKSPYQFD IQHANGVRYIRVTKYGEICLSARIFCAGTDILSLCTPTGINGWTYTQKQTTLAVEGMFIN KQNQVVQFDEKTFASLDDTCGFLRPETAWFWLSCNFWDEQGRRIGLNLASGVNESFGNEN CLWINGVLFPLTDVLFEKVNDELWQISSLNQKLNLQVHIGWCRYENINLRMIGSQFNQWQ AKISGTIEHQPTDIINCKEQYGLLEQHYAKW >gi|333032472|gb|GL891954.1| GENE 87 94193 - 94705 516 170 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03121 NR:ns ## KEGG: ACICU_03121 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 170 1 170 170 354 100.0 6e-97 MPSLFMVMLGGRHARANTEVHDVVMAVGDTLEEVYPQLKQAWFGEAQGLHIDAWAKLSGV SSQGQNYQIHFTDAAPQPDDLKLYLINLGGYNASEFGELHRYEFVVAPNTVVAKQLGKQF IDRQWQKAHTDRVIDIDDCLAIDCVAGRYIHLIKGDFAATIWENTYLTVG >gi|333032472|gb|GL891954.1| GENE 88 94715 - 95944 1538 409 aa, chain - ## HITS:1 COG:RSc1983 KEGG:ns NR:ns ## COG: RSc1983 COG0133 # Protein_GI_number: 17546702 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Ralstonia solanacearum # 13 406 10 403 403 575 68.0 1e-164 MDQQNNVIDYTQFPDANGHFGIHGGRFVSETLMAALEDLENLYSRMKNDEQFLAEFDRDL AYYVGRPSPLYYAERWSKELGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIA ETGAGQHGVATATIAARLGLECVVYMGAEDVKRQAMNVYRMRLLGATVVPVQSGSKTLKD AMNEAMRDWVTNVDTTYYVIGTVAGPHPYPQLVRDFQSIIGREARKQILEQAGRLPDALV ACVGGGSNAMGLFYPFLNDASVKMYGVEAAGFGIETGKHSAPLNAGHVGVLHGNRTYLMS DEQGQIIETHSISAGLDYPGVGPEHSFLKDMKRVEYVPINDTEALQGFRDLTKIEGIIPA LESSHAMAYVSKLAPTMSKDQIIIATVSGRGDKDLMTVARIDGVEMVEM >gi|333032472|gb|GL891954.1| GENE 89 95928 - 96587 683 219 aa, chain - ## HITS:1 COG:RSc1984 KEGG:ns NR:ns ## COG: RSc1984 COG0135 # Protein_GI_number: 17546703 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylanthranilate isomerase # Organism: Ralstonia solanacearum # 8 218 5 222 230 180 44.0 2e-45 MSQSNQKRTRAKICGITRKQDVQAVVVAGADAIGFVFFPPSPRNVTVEQAEELAKLVPPY VQMVGLFVNASVTEIQDILDCVPLDVLQLHGDETPEQCQEIARHCKRRWYKAIQVKPDLD VIAEIQKYQAAGASAVLLDAWHPELKGGTGHQFDWSKFPKLDIPLILAGGLTPDNVIDAI HTTGAFAVDVSGGVESAKGIKDQQLIERFMQGVQRGSAK >gi|333032472|gb|GL891954.1| GENE 90 96945 - 98828 1777 627 aa, chain + ## HITS:1 COG:ECs4897 KEGG:ns NR:ns ## COG: ECs4897 COG4206 # Protein_GI_number: 15834151 # Func_class: H Coenzyme transport and metabolism # Function: Outer membrane cobalamin receptor protein # Organism: Escherichia coli O157:H7 # 14 605 1 602 614 153 25.0 8e-37 MEHVMSKSFQPTRLVGAIAIAMGCSPVIFAEDATNATQLDPIVITASKSAEKASEVPARI SVISKEEIEKNPVLNLSDVLQKDASIYIKQSGGVGQLTDLSLRGGQTGSTLLLKNGARLN TQNGLGPVSPEFINLSDVDQIEILKGPASVQYGSDAISGVVQLISNNPTKSGASLTGVYG ENRTYKTLVNADYVDDSGFYASIGGQRMETDGTSIINIQDKSEKAAFDQKGYNAKIGYSN DVINTSLAIDQNQGTNNYTTNYSTNNAKRNFENRLVNWLASYKASSDLVLNARYSHYLDK IEQIIYQSHFNTTSDEGDINAKWNFVPNQNILAGVTYNRSKYDASSSPEAVRDISSTGYY LQHQYNDNGIHTQVGVRVEDNDWFGTHTVGQAAIRYQISPLTSIYTNIGTAFKAPTLEHL YGSYGYDFYSNPDLKPEESKSYEIGIDQKFNYGISAYLSGYYTDVKNLISYGAINGRTTY INLNKADMKGGEIGLKWSKDNIFVNAEYAYVEARDKDKDIDVPYRPRQTYTLTAGYDDGI YGVNASLVSRSKANAQNIENSVKVPGYATVDLNAFWNMNPNIKLFTNIQNIGDVRYNTAY NAQSSFSPEYWYINGGRQASVGVTFRY >gi|333032472|gb|GL891954.1| GENE 91 98925 - 99503 622 192 aa, chain + ## HITS:1 COG:RSc2663 KEGG:ns NR:ns ## COG: RSc2663 COG2096 # Protein_GI_number: 17547382 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 1 185 1 178 185 182 52.0 3e-46 MGHRLSKIYTRTGDSGTTGLGDGSRVAKDDLRIAALGDVDELNAIIGVLRAQITDSQVAN KADWDKSLSLIQHWLFDLGGEVCIPNYNLLQPVCIEFLEKEIDRMNEDLPMLKEFILPSG SLSCSYAHQARAVCRRAERSLMSVQTRDQNIQATALQLLNRLSDWLFVASRALQRAEGGQ EVLWQKNINEMI >gi|333032472|gb|GL891954.1| GENE 92 99576 - 100289 734 237 aa, chain + ## HITS:1 COG:PA2990 KEGG:ns NR:ns ## COG: PA2990 COG0584 # Protein_GI_number: 15598186 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Pseudomonas aeruginosa # 3 230 4 230 240 129 35.0 4e-30 MRIIGHRGARREAPENTLGGFQHIKNLGIRGVEFDIRQLQDQELVVIHDDNFLRTAGVDQ IVEQSTLAQALSFDHRQNWPNWPTSEPTPTLTGVLNLLDNFDHIEVEVKAVRDMALAEKL IQKLETELQGFEKVVTITSFDLQILTALRDINSQFKRGLLVELPVGATAIELAHQYGCCH IGWHDQLATDEMIQLSHQAGLNISVWTVNDVERAERLRDLDIQGLITDIPTTMLEAL >gi|333032472|gb|GL891954.1| GENE 93 100318 - 100791 317 157 aa, chain - ## HITS:1 COG:no KEGG:ABAYE0603 NR:ns ## KEGG: ABAYE0603 # Name: not_defined # Def: signal peptide # Organism: A.baumannii_AYE # Pathway: not_defined # 1 157 32 188 188 310 98.0 1e-83 MKCLFIAISLVLAACQSTPQQNNHKGQVKPTHRVQTPVVKKKVSPDGIQDIDWQITQING HKAKFFNQWPTLSLNSTVKTVTGHTGCNRVFGRYTFDFSQKKLDMEVNAGHSSCDGALAQ EAELVDSLQRIKRFQLVGNTLYLLDQSGQRLIQAEKK >gi|333032472|gb|GL891954.1| GENE 94 101057 - 102229 899 390 aa, chain + ## HITS:1 COG:SPCC1281.06c_1 KEGG:ns NR:ns ## COG: SPCC1281.06c_1 COG1398 # Protein_GI_number: 19075670 # Func_class: I Lipid transport and metabolism # Function: Fatty-acid desaturase # Organism: Schizosaccharomyces pombe # 10 292 62 340 356 219 41.0 1e-56 MTSAPLKAPINWTASITLIGLPILAAIIIPIYAYYYDFSVSAWVSLFFLLALSSMGITAG YHRLWAHRAYEASLPLKILLMIGGTFAVQNSILFWASGHRTHHRHVDDVDEDPYSIERGF WYAHMGWMIRDHSPSEPDFKNAPDLLNDKLVMFQHKYYALMVVAVHVGILGLVGWATGDL WGVVLLGGLLRLIISHQVTFFINSLCHMFGKRPYTDENSARDNFWLAIATWGEGYHNYHH IFQYDYRNGVKWWQYDPTKWLIWTCSKIGLAKNLRRIPSFNIKKAELAMKFKYAEQDLAI YGHDVNADISQMKQRIAQEYEAFTHTLNDWAKLKEQELQAKKAAMAEKIHKMDHKLKVDF QLLEHRLSHHRECLETLMRNIKKNTNVVPD >gi|333032472|gb|GL891954.1| GENE 95 102343 - 103785 1290 480 aa, chain + ## HITS:1 COG:VC1931 KEGG:ns NR:ns ## COG: VC1931 COG0397 # Protein_GI_number: 15641933 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Vibrio cholerae # 7 480 32 508 508 340 40.0 3e-93 MQFNPLYSSLNPKLFHIQQPSPLRGAKAGHFNLALAEELQWTDEEKQAWVEICSGQRTFS EFPPLAMVYAGHQFGQWAGQLGDGRGLLIAQILNKKGQTIDLHLKGAGPTPYSRMGDGRA VLRSVIREYLAGHALNALGVASSHAVGFTSSTQGVQREKLEPGAMLLRTSECHIRLGHFE WINQYAPELLAEFTQKCIEWHYPECQQEEQPILAFAKAVIRNTAIMIAKWQLVGFAHGVM NTDNLNITGSTLDFGPYGFMERFRPNWINNHSDYQGRYTYQNQPSIAHWNLWTWLNNLIP LAEPEHKEQFKEALAACLEEFEPTFIEHYTTGLCQKMGLPHFHKDSTECGLSFLRILQAE QLDYTQSFIRLQNKEYKALRDDCLDIRQFDAFLTQYQNIREYQDIDELDANMQQVNPIYI LRNHMAQRAIEAAERDDFSEVDRLFKLLNHPYTKQSDLEKPEDLGPLPSDVPDVAVSCSS >gi|333032472|gb|GL891954.1| GENE 96 103849 - 104535 762 228 aa, chain - ## HITS:1 COG:STM2131 KEGG:ns NR:ns ## COG: STM2131 COG0745 # Protein_GI_number: 16765461 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 4 224 13 233 240 209 49.0 3e-54 MKHIMLVEDEVELAHLVRDYLEAAGFEVSMFHDGQDAYTSFQQRKPNLMILDLMVPRMDG LTICRKVREQSDLPIIMVTARTEEIDRVLGLNMGADDYVCKPFSPKELVARVQAVLRRLE RKAEPEQNDSFRIDKAQQRIWYQQKSLSLTPTEFRLLELFLEHVGQVYSRAQLLDHINPD SFDVADRVIDSHIKNLRRKITEVAETGNRHEWIQAVYGVGYRFEYPEE >gi|333032472|gb|GL891954.1| GENE 97 104555 - 106111 1424 518 aa, chain - ## HITS:1 COG:RSp1162 KEGG:ns NR:ns ## COG: RSp1162 COG0642 # Protein_GI_number: 17549383 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 194 508 173 492 512 214 35.0 3e-55 MQKNFAKYVADVEMQKLDRLITNLGNVYTVYHDWGNAIQAQILQIEGTAAPDDYDRLSQW WLRRQYDIAIQQHSFDEHTLINISPDAGTVNKNSIFSDEELRTLEQNLPSEYQPFEGLRF PLSANQFRPSDDKNKSKKGSLKDIETQNGKKRFIALPDRLGLSSRLSLYDAKHQFVVGEP PSSDQMSYRPIMVNSQVVGYLGLKPVLDKEDALSINFFSNQKRYLLLIYALTLLSSLVAA LLMATYFKKPIQRLLNATNELTKGNYQHQVVIKRNDELGDLSTQLNHLAEILHQHEESRR QWVADTSHELKTPLAVLQAQIEAMQDGIRKATPEHLDAMMRQVSSLKKLTQDLADLAQAD AQQLKCYLSSVNPWEVILQEVENFRPKLEQAGLEIEVEGEGATLLLDRDRFKQIIVNLIG NSIRYTETGGKIHIHTSQTPQEWTLYVDDSPFGLSDEQLSRLGERFYRVDDSRTRSTGGT GLGLALSCKIAQALGGTLSFEHSPLGGLRCVLTFKKQS >gi|333032472|gb|GL891954.1| GENE 98 106345 - 106725 541 126 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03132 NR:ns ## KEGG: ACICU_03132 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 126 1 126 126 211 100.0 8e-54 MKMTAKIALFSAAIVTMGSLAACQSTTQPPKPEHGMMQDGPRDGHHHRMKHREFTPEQKA AWEQHRAERKARFEQIQKACEGKAVGQTVNVQVGDKTLEGTCNLRFEPKRPQPPVNAPAP VASQAK >gi|333032472|gb|GL891954.1| GENE 99 107015 - 108817 2367 600 aa, chain + ## HITS:1 COG:PA0506 KEGG:ns NR:ns ## COG: PA0506 COG1960 # Protein_GI_number: 15595703 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 600 1 599 601 846 67.0 0 MPQYKAPLRDMQFVLHELLNAEEHYAKLPDFQGNVSRELVDQYLEAAADFCENELSPLNQ VGDREGCTWNDGVVTTPTGFKEAYQKYIELGFPSLSAEEQYGGQGLPNSLGIAISEMVGS SNWAWGMYPGLSHGAVRTLEHHGSEEQKNTYLPNLVSGVWTGTMCLTESHAGSDLGIIRT KAEPNADGSYAISGEKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFNVNA DGTLGERNAVRCGSIEHKMGIHGNATCVINFDQAKGYLIGPENRGLNCMFTFMNTARIGT AVQGLSASESSFQGALTYAKERLAMRSLSGPKAPEKEADPIIVHPAVRNMLLTQKAFAEG GRALVYLLAQYADIVEKGETEEERKFADNILSLLTPIAKAFLTETGSESAKHGVQVFGGH GFISEHGMEQIVRDTRIACLYEGTTEIQALDLLGRKVLQTQGAMLRDFTKIVHKFVEANK DNAAMKEFVEPLAALNKEWGDLTMQIGMRAMQNPDEVGAAAVDYLYFSGYVTLAYLWARM ALVAQEKLAAGTTDVDFYNAKVTTARFYFKKILPRVRSHVDVIAGGLDPLMALDAEHFAF >gi|333032472|gb|GL891954.1| GENE 100 108985 - 110766 2044 593 aa, chain + ## HITS:1 COG:PA4199 KEGG:ns NR:ns ## COG: PA4199 COG1960 # Protein_GI_number: 15599394 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 589 1 593 593 647 55.0 0 MPIYNAPLADMKFILNDVFKAEQFWQANEKLAHVDAATAEAILEEMAKFAQNVTHPLNRT GDEEGARYENGEVFTPAGFKDAFRQYAEGGWIGLGADEEWGGQGMPKMLTVLADEMLFAT NPSFMLYPLLSVGAGMALSSYASQEQKETYLPKIYSGEWSGTMCLTEPHAGTDLGIIKTK AERNEDGTYNITGTKIFITGGDNDLAENIIHLVLAKTPDAPAGSRGISLFIVPKYLVNED GSLGDRNHVGPGSIEHKMGIKASATCVMNFDGAKGYLVGKENEGLAAMFVMMNYERLSMG IQGLGASEFAYQNAAQYATDRLQGRSAAGVQSPSKPADSILVHGDVRRMLLNVRANNEAS RAFAVYVGQQLDITKFSTDAEAVKKANDRVALLTPIAKAYLTDTAFQATLDAQMVFGGHG YIREWGMEQCIRDLRIAQIYEGTNGVQSQDLIGRKTIKCGGAFIAEYITEIRDFANDLDT DLNFIKDATLDAATEIEAITQFIIEQAAENVEFPNSAAVDYLHAVGLLSFSYMFAKIAAA AKDKSGDFYQNKLALAQYFVERILPDIDARIAKIKAGSDLIMGFSEDYFTNQA >gi|333032472|gb|GL891954.1| GENE 101 110838 - 111734 586 298 aa, chain - ## HITS:1 COG:SMc01570 KEGG:ns NR:ns ## COG: SMc01570 COG0583 # Protein_GI_number: 15966074 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 6 296 3 293 296 263 49.0 4e-70 MLLRQNLNDVYLFVVAVEHQGFSAAAKRLNLPKSTISKRVAILEKKLGLTLIHRSSRSFV LSEAGKLFYQHAKNAVDEFRYAEENLLIQQQEPSGVVRLSASVPIAQYLLSDCLPELAER YPKLLLQVEVTDRYVDVMSENFDIVIRSHFQPLPDSGLIQRVLKNDKIIAVAAPAYLMKS SPIHTPEDLLKHEGIWPELQMNPWHFQNINGQKEIVRPNIRFVANESEILKGAAKRGLGI TLLPETFCMNELSEGSLIHVLPEWSAGSVTTSLLMLTRRGLLPSVNITADFLVEKLKT >gi|333032472|gb|GL891954.1| GENE 102 111840 - 112550 580 236 aa, chain + ## HITS:1 COG:PA1466 KEGG:ns NR:ns ## COG: PA1466 COG0625 # Protein_GI_number: 15596663 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Pseudomonas aeruginosa # 6 227 5 221 228 172 40.0 3e-43 MSTFTLFYGVPSGCSFGSIVALEWSGLPYQLCRIEMPAQCNTEEYRQINPVGETPALLYD NGKVLTESMAILNHIMAKSLNAAFHYEQGTEQFNLFNQKLAFLNTTLFNAFSPLWYSLEH SSSEGNKQALREYGAVQVKKAFTALENSLTNQTWLMGDQLSFVDGYYAGIARWLKYHNVI DIDQFPNCKRLYEQLQNEAAVKFAHAIEQEQPTKSIGKFLGHIAFEDAIQQYENLE >gi|333032472|gb|GL891954.1| GENE 103 112711 - 113193 374 160 aa, chain + ## HITS:1 COG:PA3403 KEGG:ns NR:ns ## COG: PA3403 COG3223 # Protein_GI_number: 15598599 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 12 136 18 141 161 136 65.0 1e-32 MPDPKKFERTLDRFGHYAVEAFHYLALFIIGCMIAWSAAHTVFEILTVKKYASIDDILLL FIYLELGAMVGIYFKTNHMPVRFLIYVAITALTRLLISDIQHDHKADLDQVIITGSILIL ALSILVVRFASWHYPSVMKEKHSKTPTSLKTPQPQDDELA >gi|333032472|gb|GL891954.1| GENE 104 113232 - 113615 358 127 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_000573 NR:ns ## KEGG: ABBFA_000573 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 127 1 127 127 207 100.0 1e-52 MKKPIVLVLSTLMLGMSATAMADSNHRWDNYHGKDHNRYEQRHDYRYDHRNDHRAPVWSH SERGNHYGRYVAFKRGDRIPVEYRNSRYYVSDWRAHRLYAPPRGYHWVKTPNQYLLVDSK HHIYRVR >gi|333032472|gb|GL891954.1| GENE 105 113780 - 114226 270 148 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03140 NR:ns ## KEGG: ACICU_03140 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 148 1 148 148 289 100.0 3e-77 MSEISFERLHQFFCKVPSVQEARIMAHGADGEHAWWFKFSIDVEHPLAWQTVQELGHVLN YLSTNERLPTLFFPVSPPPYMNGEAKDFLSWVIQCNHPEFSPDVVCDWLEARLPNPVDDE SQWKIKTDLSEIEKLDDKALDQLIPPTP >gi|333032472|gb|GL891954.1| GENE 106 114421 - 115884 1301 487 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03141 NR:ns ## KEGG: ACICU_03141 # Name: not_defined # Def: phospholipase D endonuclease domain-containing protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 487 1 487 487 999 100.0 0 MRIFQRIHQKLNWSGRRYMAVILCVVAIAYLASAIYHTVKPLPQGINFSGKLRHADVKFL ADKTYIDANGQQQVDQHIFDEILKMIDEAKTTIVVDMFLFNSEVGDSKLKQRPLMQELTD ALISKKRQNRQIQIVMITDPINSVYGGLSPEHYRQLRQAGVDVIETNLAPLRASNPFWSG FWYICCQNIGNNPEKGWLPNPFGDEKITLRSYLNLFNFKANHRKTVVVDTDAGWKSLVTS ANPHDGSSRHSNVALVVNGATAADVLQTEAAVAQMSGSSSPSLILGDFEKDVSKPQIQVL TEGAIYEAVLKLINTAKPKEHLDLSMFYLSERKIIKALKSAQERGVIVRVLLDPNKDAFG RQKNGIPNRQVASELHAAGIPIRWCDTHGEQNHSKMILKYNAQQAELIVGSANFTARNLK NYNLETDMLVVGKVQDQVFKDAQNYFNTSWSNLQGRQMSVDYAKYADESKVKYWIYRFME WSGLSTF >gi|333032472|gb|GL891954.1| GENE 107 115960 - 118017 2241 685 aa, chain - ## HITS:1 COG:NMB0964 KEGG:ns NR:ns ## COG: NMB0964 COG1629 # Protein_GI_number: 15676857 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Neisseria meningitidis MC58 # 8 685 9 758 758 530 40.0 1e-150 MLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHPLEQTSKDFAVADTVVDQKHL TEGAATIGDALNSEVGIYANQFGAGSSRPVIRGQDGPRVKVLQNSSENVDVSTLSPDHAV TVDPVLAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQMPENGYEGQVGLRYNTGSDE KLASAGVTVGLGSQVALRVEGLTRDANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGLSW IYDRGYTGISYSNRRDQYGLPGHSHEYETCHIHDLSLHCGDHDHEGHSDEEAHDHEHEHG GPWIDLKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDEIEEGTIATRFQNKGYDGRIE LVHNPIADWEGVIGTQLGQQKLNLTGEEAFMAPTTTKKWSVFALEHKQWKDVHFELSARA DQQEIDVDDNSKQDFDGSAFSYAGAANWEFAPNYKLSFVASHQERLPLAQELYANGAHFA TNTYELGNDQLGKEKSNNVELGLHFDHDKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQ YTQDKARFYGAEGEIGYQITPIYKISAFGDYVRGKIDAEGNAPRIPAGRLGTKVDADFGD GFSGSAEYYHVFNQDKIAAYETETEGYNMLNLGVAYSGQYGAKTDYRVYLKANNLLDDTV YQHASFLSNIPQVGRNFTVGVDFSF >gi|333032472|gb|GL891954.1| GENE 108 118153 - 118917 371 254 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03143 NR:ns ## KEGG: ACICU_03143 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 254 1 254 254 429 100.0 1e-119 MPFTISHAVIAPPLAKLSRNTLPIAALAIGSMTPDLYRLFTMQSGMLTHQWKGLFYPNLA LGLLFSAIWYLLYRPVLYRFFGIQHDLKLDSFRLFFSFFIGIIIALLIGIATHLIWDGLT HSDFRTFIFQDFLSQTVHLFGRPYPLHRLLQLGSSALALPFLGWMSIQYYQRHKQHWKVN YKIKIFAWCLFALSTLLGLFSFWDYARYIPHEVWHSDTYYFTGRSINEFMQGWLSTFSLG CLLFLFLDRQQRMG >gi|333032472|gb|GL891954.1| GENE 109 119087 - 120865 2430 592 aa, chain + ## HITS:1 COG:PA0963 KEGG:ns NR:ns ## COG: PA0963 COG0173 # Protein_GI_number: 15596160 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Pseudomonas aeruginosa # 1 591 1 591 591 858 71.0 0 MMRTHYCGSLTEAQIDQTVTLCGWVHRRRDHGGVIFLDMRDRDGLVQVVIDPDTPEAFAT ADKARSEYVLKITGRVRRRYEGTENPNMVSGQIEVLGKEIEVLAASETPPFPLNDDTINV SEEHRLKYRFLDIRRPEMLERLRFRSKVTNLIRNYLDDHGFLDVETPILTRATPEGARDY LVPSRVQNGSFYALPQSPQLFKQLLMVGGIDRYYQIAKCFRDEDLRADRQPEFTQIDIET SFLNDDDIMDLMEGMTVKLFNDLLGVKFEKFRRMPYSEAMRDYASDKPDLRIPLKLVDVA DLMQEVEFKVFAGPAKDPKGRIAALRVPGAGSLTRSQIDEYTKFVGIYGAKGLAYIKVNE IEKGIEGLQSPIVKFIEPIVMQLLERVGAENGDIVFFGADKAKIVNDAMGALRVKIGHDL NLATCEWAPLWVVDFPMFEETDDGKWTSVHHPFTLPKSSVEDVKSNPGEALSVAYDMVLN GTEVGGGSLRIYTLEMQKAIFEALGISDEEAEEKFSFLLNALRYGAPPHGGLAFGLDRLV MLMTGATSIRDVIAFPKTKTAECPLTQAPAPVEANQLRDLGIRLREQQKKEA >gi|333032472|gb|GL891954.1| GENE 110 120918 - 121946 416 342 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03145 NR:ns ## KEGG: ACICU_03145 # Name: not_defined # Def: glycosyltransferase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 342 1 342 342 677 100.0 0 MQPIDFVMIWVDSTDTKWQQQYIYYKSKETKTKIDELVDQCRYRDWNNLHYWFRSVEKFC PWVRKIHLVTCGHFPEFLVKNHPKLNLVTHDQIIEPHCLPTFNSHAIEINIHKIEGLAEH FVYFNDDTFINSPLEPEFFFKNGLPCDGIQLQPLMVVGEENFLGAVALTDVAIINKYFDK RKLFRSNPSALFNHRYSISNNLGNFLSLYNRKFSSFYSTHLPQPFLKSVFEEVWRNEESY LKEVSSHRFRQPLDVNQYLFRLWQLCSARFYPVNIFQRGQNFNLRIQNLPEINHVIKNEQ LPQICLNDDEHVVDFEKLKTEIIQIFEQKFNTVSSFEKKITH >gi|333032472|gb|GL891954.1| GENE 111 122149 - 122367 307 72 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_000566 NR:ns ## KEGG: ABBFA_000566 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 72 1 72 72 119 100.0 4e-26 MAMRPDVRRHALVVIVFSLAQWFFMRYILANELFNLTTNQRILYFCVSSLVGALLIFVAL IYMVLKGNADKN >gi|333032472|gb|GL891954.1| GENE 112 122405 - 123334 729 309 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03147 NR:ns ## KEGG: ACICU_03147 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 309 1 309 309 596 100.0 1e-169 MVKQKNIIIGSATGYNADLISSFVYSLGKTDFDGILTLIIYKEQMTEFVNAFSDVKNFKI EFKVSTIGKFKSKSKYSGIYKYKFVKNIFKKIIDLTVNEEKPETKIKGLKITGYPHVSRF FEYKEILENHPDASHVLLTDVRDVFFQSNPFKNLSKGLFVGMENPDFTIGTEQYNQKWIL DAYGESFYNLAKDEQVSCSGVTIGDHESIKVYINKMIEEFCKQPYQKMSNRIYDQAMHNK LLITNELAEVTRCQPFESIIVTLGLYPIEQISINDQGFIINRNQEIIPIVHQHDRHAELI QLCDNYIGK >gi|333032472|gb|GL891954.1| GENE 113 123364 - 124119 553 251 aa, chain - ## HITS:1 COG:no KEGG:ACICU_03148 NR:ns ## KEGG: ACICU_03148 # Name: not_defined # Def: putative glycosyltransferase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 251 1 251 251 478 100.0 1e-133 MKKYLISIESTNSERLKKLFSQATFYKYRDEFKQFGVIGKNLSVSEYFQQGVAGKKKPMT PGELGCAMSHIAALKDFLSSDEEYAIIFEDDVIERFEIDFQDLEKLIRSLNFGPCFFLSL GGIQMKICNRVRGKLLPEELYNQKILKVDYDYLEKLAYAYAYVVDRKMAQMLVDYHQPIK IYDHWQDLVGRGEFSFYVSFLFDHPIIENNDALSYLEKERSLVGSHSQDDSDFLRYLRVK LKKYILNKYII >gi|333032472|gb|GL891954.1| GENE 114 124188 - 125078 652 296 aa, chain + ## HITS:1 COG:no KEGG:ACICU_03149 NR:ns ## KEGG: ACICU_03149 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 296 1 296 296 610 99.0 1e-173 MLNRLIQKKWYKYQQAKKAKTFDSHWYMRFGWLEQPFTTLEQLDSLFEIHSPGKFTFADS FYAHENGRHFIFFEEVDDQHPVGFLSVLEVFKDGTYTPPETILKLDYHLSYPCVFKIDST WYMIPESSANKTIELWKCTDFPMKWEKHSNLMENIEAVDSTPFYHEGLWYLFTSTRRDCK KFGDRLDLFFTEDILNPNWQEHPMNPVCRGSQQFRMAGKPFVYKGQLVRPSQDSLKRYGG NIELKAITQLSPAAYEEKLLEVVLPDWNQADDGCHTINFEDNFVVLDAIRLTPKNN >gi|333032472|gb|GL891954.1| GENE 115 125075 - 126109 1079 344 aa, chain - ## HITS:1 COG:TM0622 KEGG:ns NR:ns ## COG: TM0622 COG0438 # Protein_GI_number: 15643387 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Thermotoga maritima # 71 324 88 353 388 97 30.0 3e-20 MKIVQVLATSGGVGGLEQHTFNLVNELALNHEVHVIAHPCYVDKFSQQVHFHAIDFARSR WNIFLLWQLKNLIQQIQPAIVHAQAGKAAELIARIKPFLSGPKFVTTVHGTKKNKSAYLA GDAVIAVSQALTQGIPESKAHVVYNGVYPQPVLTTENKEKLLQSIQKDFTELDTSKKVVM CIGRLEPVKNISLLIESMQQIDANLWIVGDGSLRASLEKQVSELNMQNRVAFLGFRTDAR DLVQLADIVVLSSDREGFPLVMVEALQADKAMASTKVNGVIEWLPEQYLAEIGDTQGLAK AIEYALQSEAQNDFSPLYAKAKAELTVPAMAEQTLNIYKGLLKT >gi|333032472|gb|GL891954.1| GENE 116 126121 - 126885 723 254 aa, chain - ## HITS:1 COG:SMc01222 KEGG:ns NR:ns ## COG: SMc01222 COG0463 # Protein_GI_number: 15965322 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Sinorhizobium meliloti # 3 247 4 255 270 149 31.0 3e-36 MNKIPCSVYIVTLNCGAWLERTLQSVSEFDEVIILDSGSTDNTYEIAKRFENTQISHQDW QGYAGQKSLALAKCRNDWVLNLDGDEVLSEELKQEIVETIQQNKLDALITPINDVFLGVP NSKHTKKHAKVRFFRRSKGHYDLANKVHENVIVDGESQRAQHDIYHYGESSIFVKVEKNN QYSNLKALEKYQKGKSPSIAKLVLVMPVTFMKSYFIRRSFLNGWRGFVNSMINAFYAFLK EAKLFEQTMNKDKK >gi|333032472|gb|GL891954.1| GENE 117 126882 - 127634 809 250 aa, chain - ## HITS:1 COG:FN1244 KEGG:ns NR:ns ## COG: FN1244 COG0726 # Protein_GI_number: 19704579 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Fusobacterium nucleatum # 29 250 8 246 250 101 31.0 2e-21 MWFLYVAVGLLALAALLYVLGNYTFWLPFRSSKLPRIVMLHQVTPKDAASGMNMPPEKFE QLLTLLTRKGAIFCFVSELEQYRNQKNVVALSFDDGFMDNYLYAYPLLKKYNAKATIYLA TQIEGIEKLTHEQIHEMANSGLIEFGAHTQHHVNLLKLDDQTAYDEMLQSKRDVEALVGK CPSFAYPFGRFNEKHQKMAQEIGFKNAVSTRKKIEAYEADNQFNIPRVSTHGAMNALQMR IALAKGRYKL >gi|333032472|gb|GL891954.1| GENE 118 127634 - 128128 369 164 aa, chain - ## HITS:1 COG:no KEGG:ABSDF0527 NR:ns ## KEGG: ABSDF0527 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_SDF # Pathway: not_defined # 1 164 179 342 342 308 95.0 7e-83 VIYFYRVQRKFLKDLAEALQQGHVNYQYYGCFEQPGVYGKAYYKVLSETKMGLNYSRRND VTLYSSDRIVQLTGNGLLTFSPRIPGFEKLYTEQEVVYFDDQFDLAKKIQFFDQNPEQAV KVAKEGWEKTRKSFNAKRITQFMVEVTFKQPLSEDYEWSHEVYA Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:50:20 2011 Seq name: gi|333032471|gb|GL891955.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld560, whole genome shotgun sequence Length of sequence - 34536 bp Number of predicted genes - 31, with homology - 30 Number of transcription units - 20, operones - 8 average op.length - 2.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 13/0.167 - CDS 266 - 1099 727 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 2 1 Op 2 5/0.167 - CDS 1119 - 1697 598 ## COG3017 Outer membrane lipoprotein involved in outer membrane biogenesis 3 1 Op 3 . - CDS 1702 - 3420 1694 ## COG0457 FOG: TPR repeat - Prom 3442 - 3501 5.2 + Prom 3343 - 3402 5.5 4 2 Tu 1 . + CDS 3500 - 4783 1304 ## COG0373 Glutamyl-tRNA reductase - Term 4657 - 4716 0.6 5 3 Tu 1 . - CDS 4780 - 6645 1615 ## COG0358 DNA primase (bacterial type) - Prom 6720 - 6779 6.6 - Term 6735 - 6778 10.2 6 4 Tu 1 . - CDS 6804 - 7961 1458 ## COG4105 DNA uptake lipoprotein - Prom 7998 - 8057 2.2 + Prom 7947 - 8006 4.9 7 5 Op 1 11/0.167 + CDS 8033 - 9085 1123 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 8 5 Op 2 . + CDS 9096 - 9833 681 ## COG1496 Uncharacterized conserved protein + Term 9844 - 9881 -0.8 + Prom 9880 - 9939 7.0 9 6 Tu 1 . + CDS 10054 - 10605 577 ## COG0655 Multimeric flavodoxin WrbA + Term 10613 - 10654 5.3 - Term 10601 - 10641 3.5 10 7 Tu 1 . - CDS 10647 - 11123 508 ## COG0691 tmRNA-binding protein - Prom 11269 - 11328 3.1 + Prom 11176 - 11235 5.1 11 8 Op 1 2/0.500 + CDS 11259 - 11750 404 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 12 8 Op 2 . + CDS 11827 - 12015 173 ## COG1145 Ferredoxin + TRNA 12462 - 12538 94.1 # Met CAT 0 0 + Prom 12466 - 12525 80.4 13 9 Tu 1 . + CDS 12688 - 13872 1255 ## ACICU_00800 hypothetical protein + Term 13893 - 13931 4.1 14 10 Tu 1 . - CDS 13925 - 14767 502 ## COG0583 Transcriptional regulator - Prom 14843 - 14902 2.1 + Prom 14730 - 14789 4.6 15 11 Tu 1 . + CDS 15009 - 16049 1363 ## COG0473 Isocitrate/isopropylmalate dehydrogenase + Prom 16051 - 16110 80.3 16 12 Op 1 . + CDS 16279 - 17925 1360 ## COG1292 Choline-glycine betaine transporter 17 12 Op 2 . + CDS 17937 - 18911 985 ## COG0657 Esterase/lipase 18 12 Op 3 . + CDS 18954 - 20069 1102 ## COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit + Term 20086 - 20124 4.7 19 13 Op 1 . + CDS 20134 - 21585 1709 ## COG1012 NAD-dependent aldehyde dehydrogenases 20 13 Op 2 . + CDS 21633 - 22589 772 ## COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 + Term 22640 - 22685 4.2 + TRNA 22747 - 22823 94.1 # Met CAT 0 0 - Term 22820 - 22848 1.0 21 14 Op 1 . - CDS 22867 - 23895 1021 ## ABAYE2956 hypothetical protein 22 14 Op 2 . - CDS 23888 - 25513 1964 ## COG0171 NAD synthase - Prom 25725 - 25784 8.2 23 15 Tu 1 . - CDS 25898 - 26434 311 ## COG4253 Uncharacterized protein conserved in bacteria - Prom 26464 - 26523 2.9 24 16 Tu 1 . - CDS 26549 - 27409 847 ## COG1741 Pirin-related protein - Prom 27449 - 27508 6.0 25 17 Op 1 . - CDS 27580 - 28032 407 ## COG1981 Predicted membrane protein 26 17 Op 2 . - CDS 28051 - 29280 1394 ## COG0304 3-oxoacyl-(acyl-carrier-protein) synthase + Prom 29485 - 29544 6.9 27 18 Tu 1 . + CDS 29577 - 30902 1282 ## ACICU_00814 hypothetical protein + Term 30984 - 31032 7.2 + Prom 30988 - 31047 6.1 28 19 Op 1 56/0.000 + CDS 31103 - 31477 646 ## PROTEIN SUPPORTED gi|162286748|ref|YP_001083900.2| 30S ribosomal protein S12 + Prom 31491 - 31550 2.2 29 19 Op 2 . + CDS 31637 - 32107 780 ## PROTEIN SUPPORTED gi|162286747|ref|YP_001083901.2| 30S ribosomal protein S7 30 19 Op 3 . + CDS 32142 - 32204 100 ## + Term 32227 - 32262 5.5 31 20 Tu 1 . + CDS 32286 - 34424 2563 ## COG0480 Translation elongation factors (GTPases) Predicted protein(s) >gi|333032471|gb|GL891955.1| GENE 1 266 - 1099 727 277 aa, chain - ## HITS:1 COG:NMB0874 KEGG:ns NR:ns ## COG: NMB0874 COG1947 # Protein_GI_number: 15676770 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Neisseria meningitidis MC58 # 6 270 12 278 281 231 44.0 1e-60 MIRVPSPAKLNLFLHITGRRENGYHELQTIFQLIDLYDWMTFTPISEDEIQIEGLGEVQL EQNLIYRAAQILRPHAQNPCGLHIKIEKNIPMGAGLGGGSSNAATTLIVLNQLWQCGLTE EQLAQFGVKLGADVPIFIYGLNAWAEGIGEHLSFIDLDQKQFIVLKPDCFISTQLLFSQK TLTRDSKPTTFCAYQLEPSNFGNNFEPLARELYPEVEEAMQYLDQFGHAKLTGTGACVFA EVTDEMNVDDILKHAPCKAYLVHSLKESPLRHFKVAS >gi|333032471|gb|GL891955.1| GENE 2 1119 - 1697 598 192 aa, chain - ## HITS:1 COG:PA4668 KEGG:ns NR:ns ## COG: PA4668 COG3017 # Protein_GI_number: 15599863 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane lipoprotein involved in outer membrane biogenesis # Organism: Pseudomonas aeruginosa # 34 191 41 197 205 102 33.0 4e-22 MSKLAQLCTAICGSSVLFLTGCQHFTQPKAAVTHQVQDEKHFNLQGKIGVRTPQQTGSAF FTWIQQQDNFDIELSGILGVGKTQIQGKPGEVTLNSAKTGLITAASPEELLERATGWQAP ITHLTSWILAKPATLNAQISKDNANRVSQLIEDGWTVNFSYDGEQTLPNKLILKQALAED KENRITMVIQNR >gi|333032471|gb|GL891955.1| GENE 3 1702 - 3420 1694 572 aa, chain - ## HITS:1 COG:PA4667 KEGG:ns NR:ns ## COG: PA4667 COG0457 # Protein_GI_number: 15599862 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Pseudomonas aeruginosa # 34 559 55 579 590 122 24.0 3e-27 MRQMNSRINFNGASIRQYSTTFLLLGSMSSYVYARPVQETYAVHSFDQALQQSMVAEFAL AYDDIPTALHNYTVLAIKSNSTTIKQRALDVALEYNDLQAALNIATHWVVQEPKDVPALF YLSHIALKTHEYQLAAETLDKILKIDPTADLEQILASIAPENAQDREVLLTALRSSAEKD NPSILALIANLEAQNGQLEPALSTINRALRRRPKVTSFILMKANLLIALSDQEGALKWYA KSSRKYKKNLDIRLAEVRYLIQINQPQLALEKLEKIIQSNPHAEEALFIAGLTSIDLKQY DKAEQYLVDLRNSAKYQNEAYYYLAINAERKQHYETAKAYYRLVDGSLYIVSRRNLIAIY DKQENLHDALRFLTQERVNYPQHASFLYQAQAEILKKMGNKKAALNLLDEAIKNLPDDPE LIYAEVLLLDPYTDRDKLDKTLKQLLQLEPNSPTYLNAYAYTLALQNRRLKEARQYAEQA LEYAPEQASILDTLGYIAFLQNDYEAAAEALGKAYELSHNINIGIRYAKALYMQGSLTQF SAVLQQLKQKHANDPQLQQLDALILPTSAKKS >gi|333032471|gb|GL891955.1| GENE 4 3500 - 4783 1304 427 aa, chain + ## HITS:1 COG:VC2180 KEGG:ns NR:ns ## COG: VC2180 COG0373 # Protein_GI_number: 15642179 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Vibrio cholerae # 1 415 1 413 419 312 43.0 1e-84 MSFFALGVNHQTASVELREQIAFNAERLSNLLAEQRHHESLKDLVVVSTCNRTEVYAMAE DAESLLKWLADANNIDVKQLIHHVYRYENAQAITHLMRVASGLDSLMLGEPQILGQVKSA LALSKEAQTVSPELNSVFEYAFYAAKRVRSETAVGSHAVSMGYAVAQLALQVFSKPEKLT VMVVAAGEMNSLVAKHLAEMGVAKMIICNRSRERADQLAQEIAHQVEVEIIDFSDLAENL YRADVVSSCTGSLHQVIAYADVKTALKKRRYQQMLMVDLAVPRDIDPKVESLDGVYLYGV DDLQSVIDENLAQRRQAAVEAEVMVNQLATQLITHQKVKEAGSTIHAYRQHSEEISQREL TQALEALHHGGNPEQVLQQFAHRLTQKLIHPTSMLLREAAKAESPDYFEWLQQHLQDVFD HERKPKR >gi|333032471|gb|GL891955.1| GENE 5 4780 - 6645 1615 621 aa, chain - ## HITS:1 COG:YPO0644 KEGG:ns NR:ns ## COG: YPO0644 COG0358 # Protein_GI_number: 16120969 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Yersinia pestis # 3 464 5 421 582 360 41.0 5e-99 MAIPQHTIDQILDRTDIVDLIGQRVKLKKTGRTYSGCCPFHQEKTPSFHVYRDKQYYHCF GCQANGNAIRFLMDIDNRNFIDVMKELSSNTGVELPKDNTDNKKLSYTRQVTKPSTPPKT VAEPTTQAPIEDQYNTFEPVYFDDPFAQFEQPFSFDEPVQEGNLYDLLENVAQFYEHQLP TSQKAKNYFKQRGLSDQTIQFWRLGYAPEDWQHLEKAFPYDIEGLKQLGLIRSSDSGRDF DLLRDRVIFPIRDPKGRVVGFGGRALNDEIKPKYINSPDSEVFHKNQLLYGLYEGRKLKA NDWLMVEGYMDVIALQQYGITGAVATLGTASNTEHLNILFKQNNRITIAFDGDAAGQKAA RRTLEIALPLLNDGRELKFFVLPNDHDPDSLIRREGVENFQKLLQQAPLLSDFVFAHLTG QHDISTPEGKSLVMGELRELTELLPKQGSFRYLLTQSFREKLGLGKRFTPQISHDASLSF NIQTKDEDFAIAILMHHPFLYIHFEGLRAYIPQDELLAKILAILNRIFDELPDDQELATY YVLGACSSYCHEIADIMQRTNIQALTQAPEVADKLAKEYALGLQERYLRQKLKSKISLVE SRNLRQQLNELTKQISLRLLS >gi|333032471|gb|GL891955.1| GENE 6 6804 - 7961 1458 385 aa, chain - ## HITS:1 COG:PA4545 KEGG:ns NR:ns ## COG: PA4545 COG4105 # Protein_GI_number: 15599741 # Func_class: R General function prediction only # Function: DNA uptake lipoprotein # Organism: Pseudomonas aeruginosa # 24 349 18 341 341 171 35.0 3e-42 MSLPRYKITMLALSLGVASAFVGCSSNPSKKEVVDTGPQSSEQAYFDKAQKALDRGQYLD ATKSLEAIDTYYPTGQYAQQAQLELLYSKFKQKDYEGAIALAERFIRLNPQHPNVDYAYY VRGVSNMEMNYDSLLRYTSLQQSHRDVSYLKVAYQNFVDLIRRFPSSQYSVDAAQRMKFI GQELAESEMNAARFNVKRKAWIAAAERSQWVIEHYPQTPQVPEALATLAYSYDQLGDKAT SQQYIEVLKLNYPSLVNKNGTVNMRAARKEGNWINRATLGILGRESKSVTPDTTTSSEAE PKRSLLNRVSFGLIGNSGKEEAEETTNTPVEAPKSERSWTNRLSFGLLDKPEPKAAEGAT IAPATSSSEAPSASPADNEADDAAQ >gi|333032471|gb|GL891955.1| GENE 7 8033 - 9085 1123 350 aa, chain + ## HITS:1 COG:PM1719 KEGG:ns NR:ns ## COG: PM1719 COG0564 # Protein_GI_number: 15603584 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Pasteurella multocida # 36 346 3 314 324 332 51.0 5e-91 MTSAQSSNTNFSETDFNLLEDSEDADNHTSDTTATRLSLQVQLDESYLGQRIDQVAAMLW SEFSREKLKQWMKEGHLLVNGNIVKPKYRCEGNETLTLNVELEAQTNSQPENIPLDIVYE DEDILVINKPVGMVVHPGAGNTSGTLVNALLYHSPKSAELSRAGLVHRIDKDTSGLLVVA KNLEAQFSLSKQLGDKSVYRIYDLVTYGNIIAGGTIDEPIKRHPVDRVKMAILPGGRDAV THYNVKERFRDFTRVQAQLETGRTHQIRVHFSYIGHGLVGDQVYMNRVRIPAGASELLIE TLRGFKRQALHAAKLGLKHPRTGEEMLFEAPWPEDFTQLVNVLRTENAAY >gi|333032471|gb|GL891955.1| GENE 8 9096 - 9833 681 245 aa, chain + ## HITS:1 COG:ECs3456 KEGG:ns NR:ns ## COG: ECs3456 COG1496 # Protein_GI_number: 15832710 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 # 7 245 11 242 243 166 38.0 3e-41 MEFVQGLPQGVFVGQTRVHHPLALPAEQTELTGFNLALHVKDEAQRVQQHRMMLLDEFAQ FGVKKMTWMTQTHSTICHTVNEQIPFTALIGDGLITQTKGHALMMMTADCLPVVLGNAEG TEIANLHAGWRGLAGGIIENTVAAMQNPPTWAWLGAAISQPCFEIGAEVKTAFCSKYPEL ETTFIDGAAPNKFHADLYAIARFILQSLGVEKVLGGDQCSYQQQDEYFSYRRDAKTGRMA TFVFM >gi|333032471|gb|GL891955.1| GENE 9 10054 - 10605 577 183 aa, chain + ## HITS:1 COG:XF1133 KEGG:ns NR:ns ## COG: XF1133 COG0655 # Protein_GI_number: 15837735 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Xylella fastidiosa 9a5c # 8 182 3 186 189 157 48.0 1e-38 MSLPEKHLSIVYHSPYGHTAKVASAIASGAEVMGVKVHVMNIEHIDWDVLDASQGIIFGS PTYMGSVTADFKKFMDSTSKRWKNRLWQGKLAAGFANSGGLSGDKLAVLQQLNIFAMQHG MLWSGLPLMTTGHTETDLNRLSSCLGLMTQSDNAPVEITPPQGDLDTAKWFGEYIAGLLY RLN >gi|333032471|gb|GL891955.1| GENE 10 10647 - 11123 508 158 aa, chain - ## HITS:1 COG:PA4768 KEGG:ns NR:ns ## COG: PA4768 COG0691 # Protein_GI_number: 15599962 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Pseudomonas aeruginosa # 8 154 5 151 159 185 65.0 2e-47 MAKATVVKKHNGGTIAQNKRARHDYFIEEKFEAGMSLLGWEVKSLRAGRMSLTESYVIFK NGEAFLFGAQIQPLLSASTHIVPEATRTRKLLLSRRELEKLMGAVNQKGYSCVPLACYWK GHLVKLEIALVKGKQLHDKRATEKERDWQRDKARIFHK >gi|333032471|gb|GL891955.1| GENE 11 11259 - 11750 404 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 1 161 1 161 164 160 45 1e-38 MSKTRVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSL GHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLT PSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW >gi|333032471|gb|GL891955.1| GENE 12 11827 - 12015 173 62 aa, chain + ## HITS:1 COG:VC0716 KEGG:ns NR:ns ## COG: VC0716 COG1145 # Protein_GI_number: 15640735 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Vibrio cholerae # 1 51 26 77 84 67 67.0 6e-12 MGEVIYEINPDLCTECVGHHDQPQCQLFCPVDCIPKDPQHEETEEQLLDKYKRLIAQKST SN >gi|333032471|gb|GL891955.1| GENE 13 12688 - 13872 1255 394 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00800 NR:ns ## KEGG: ACICU_00800 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 394 1 394 394 769 100.0 0 MKRSLLFLGILSLTAGTQVSAADLSWGDPTLDSGQFKVSGAIRSRYLHKDYVVGANEGSQ NDDWRLTDIKLVLGYENPNWIAGADARCYQYDRLCDAIFLKKAWVGYKLSDQQRVTAGLQ PVDFGFGEFWGSSYYETLLNTVGLEDIDNLGIKYKFADDKYNLTLGFYPTDGGNYKGTSK DSSRYSGNFVEADDLTVGTNIEEKNMWIARASRKFELDKAQKFSTELGGSVWYSDLENKR TDEDGHRKSWNVFAQTQYQAWQWMFLAGKQDVTNGDNLLPNSSTIGAFDYPYQVANKGKY LVNEINYTFAQPFHKIENIKPYISHSRFFKDEDGYKDSERLIAGVYFNYKAIGIQGEYIM SKNDPMVGGGANGLAQGSSNDWDKLFYLSIGYYF >gi|333032471|gb|GL891955.1| GENE 14 13925 - 14767 502 280 aa, chain - ## HITS:1 COG:ECs2508 KEGG:ns NR:ns ## COG: ECs2508 COG0583 # Protein_GI_number: 15831762 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Escherichia coli O157:H7 # 5 260 58 310 314 237 43.0 2e-62 MSCKLFHRSTRHVSLTEDGKLILERVSNILEEFDEVCELVNNPLSTPTGRMDIISSFGFG RKHVAPILSKLMMLYPKLQIHFDTIDNTKDLIQHSIDLDIRIGNEIAPNMIAKKLASNFR ILCASPSYLLKHGVPDSIEDLQTHDCLTISERDQSSVLWKFRHASEDVSVHIKPRFVSNN GEIIHQLAIEGHGIIFRSIWDVADELITGQLQHILPEYWQDADVWAVYPSRLKSSSKLQT CILFIQNELLNRLQHVQNLSRGQLISPAVKREPPPEKVFL >gi|333032471|gb|GL891955.1| GENE 15 15009 - 16049 1363 346 aa, chain + ## HITS:1 COG:ECs2509 KEGG:ns NR:ns ## COG: ECs2509 COG0473 # Protein_GI_number: 15831763 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Escherichia coli O157:H7 # 1 346 1 346 361 547 72.0 1e-156 MAKRYKVATIAGDGIGLEVLPEGIKVVKAAAEKYGIDLQLDAFDWASCDYYLEHGKMMPD DWFETLQGYDAIYFGAVGWPDKVPDHISLWGSLLQFRRGFDQYVNLRPVRLMPGVKCPLV GKKPGDIDFYVVRENSEGEYSAIGGKAFEGTDREFVLQEAVFTRHGVDRILRYAFEFANQ RDAKKITAATKSNGIAVSMPYWDERVDAMAKQYPQIQADKQHVDILAARFVLQPERFDVV VASNLFGDILSDLGPACTGTIGLAASANLNPERKFPSLFEPVHGSAPDIYGKQIANPIAA IWSGAMMFEFFGEEDERCIQAGQDIMQAIENVLINGPKTADIGGAS >gi|333032471|gb|GL891955.1| GENE 16 16279 - 17925 1360 548 aa, chain + ## HITS:1 COG:YPO2494 KEGG:ns NR:ns ## COG: YPO2494 COG1292 # Protein_GI_number: 16122715 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Choline-glycine betaine transporter # Organism: Yersinia pestis # 14 512 11 509 548 561 56.0 1e-160 MDNQNTKIYTDKFLAVTSLLFVFISVAGLAIYSQESIKIAATWMQWTTSVFTTPVLLFAF LAIIFTFGLAFSKYGKIKLGEGKPQYSTMSWIFMFILSGIGSSTLYWGFLDWAYYYQTPG LSLPPESAEALKYSVAYSFFHSGLSAWAIYALASISLCYSYHVRKNKGLSLASVIEAVTG FKSTGVVGRLVDLMFLLCMFGALTISLVLTAVTFTNILSQLTGIPNTFMTKVIIILAVSV LFALSSYVGMDKGMQRLSHMVCLGVVLFAIYVLCFGPTQFILNNSLMSFGLMATNFVDMS LFTDPMGDGKFTREWTVFYWLWWISYAPGVALFVTRVSKGRTIKEVIFAMVIGGSVGLWF IFGVFENYSVYSFIHGAVNVPQILSQQGGEVAIGQLLSLLPAGKLMMWIFLGIMVVFLAA HMDAVGYAVSATCTRGLSEGQDPSPNARLFWCVMLTLVPIAMIFSKAPLDTMKTATIVTA LPFIVIILIQTYGLVKWLIQDYAKVPSHLIEQQGYDDQEIGLNQTQDEHAKRMQLELASS IKLDRKTS >gi|333032471|gb|GL891955.1| GENE 17 17937 - 18911 985 324 aa, chain + ## HITS:1 COG:PA5384 KEGG:ns NR:ns ## COG: PA5384 COG0657 # Protein_GI_number: 15600577 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Pseudomonas aeruginosa # 7 313 3 307 331 194 42.0 2e-49 MTTYEQATYALSEEMQSLVYWSSIYSPADADIDSVRAAYDAMCRHYTLPRDDKLDVEDRV IANEEHPVPVRVYLPKTNRPESGWPCVLYLHGGGWMVGGLDSHEFIISYLCKDLNAVVIS VDYRLAPEHRFPAAFEDCLAVYHWLKQHGSAWQIDSENIVLAGDSAGGNLAAALAVELQH SGLQAQGLALVYPCLTTAFDTASAQKHAHAPLLTTEDMHFYLKEYAPDSQDWQDLRLAPL LATDFSDMPTSFVAVAEYDPLSDDGYFLTQKLEQAGIPNEFHLGKGLLHGSLRLMRDCPE VQQLYQNMLSAIRRMFGSVEKTSI >gi|333032471|gb|GL891955.1| GENE 18 18954 - 20069 1102 371 aa, chain + ## HITS:1 COG:ECs2511 KEGG:ns NR:ns ## COG: ECs2511 COG4638 # Protein_GI_number: 15831765 # Func_class: P Inorganic ion transport and metabolism; R General function prediction only # Function: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit # Organism: Escherichia coli O157:H7 # 7 368 10 370 374 591 73.0 1e-169 MSAVEKLPEDFCANPDVAWTFPKVFYTSSQVFEHEKEAIFAKSWICVAHGSELAQPNDYI TRKVIGENIVIIRGKDSVLRAFYNVCPHRGHELLSGSGKAKNVITCPYHAWTFKLDGSLA LARNCDHVESFDKENSSMVPLKVEEYAGFVFINMDENATCVEDQLPGFAERLNQACGVIK DLKLAARFVTETPANWKVIVDNYMECYHCGPAHPGFADSVQVDKYWHTTHQNWTLQYGFA RSSEKSFKLDPSVTDPEFHGFWTWPCTMFNVPPGSNFMTVIYEFPVDAETTLQHYDIYFT NEELTQDQKDLIEWYRNVFRPEDLNLVESVQRGLKSRGYRGQGRIMTDKQRSGISEHGIA YFQHLVAQYHQ >gi|333032471|gb|GL891955.1| GENE 19 20134 - 21585 1709 483 aa, chain + ## HITS:1 COG:ECs3522 KEGG:ns NR:ns ## COG: ECs3522 COG1012 # Protein_GI_number: 15832776 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Escherichia coli O157:H7 # 4 483 3 482 482 629 61.0 1e-180 MSSLQSTELFQQQAYINGQWLAAQSNATVPVSNPATGEEIGTIPNMGAAEATQAIEAAYT ALQSWKALTAQNRADILLAWHKLVLDYTDELALIMTIEQGKPLAEAKGEVRYAASFIQWF AEEGKRIYGDVIPTVNNQQRFIISKEPVGVVAAITPWNFPIAMITRKAAPALAAGCTVVI KPANETPYCALAIAKLAEKAGIPAGVINVVTGKSQEIGSVFTSHEKVKKLTFTGSTPVGR LLMQQCSSTIKKLALELGGNAPLIVFDDADLDKAVQGAIFAKFRNAGQTCVCANRIYVHD NIYQAFAEKFVQEVQKFKVGNGLEDGVQIGPLINEKAVLKAQQLIDDAVSKGAKIACGGK QHALGQTFYEPSVLTNVDRTMEIVQEEIFGPVAPLIRFTDEADVVAQANDTIFGLAAYVY SENISRLWRVSEQLEYGMVGMNATAISNEVVPFGGVKQSGVGREGSKYGLEEFMTIKYMC LGL >gi|333032471|gb|GL891955.1| GENE 20 21633 - 22589 772 318 aa, chain + ## HITS:1 COG:yeaX KEGG:ns NR:ns ## COG: yeaX COG1018 # Protein_GI_number: 16129757 # Func_class: C Energy production and conversion # Function: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 # Organism: Escherichia coli K12 # 3 318 2 321 321 302 51.0 6e-82 MASHYEMFPAVVTRVEQLTPLIKRFTFKRQDGQNFPRFSGGSHIIVKMNEQLSNAYSLMS CTQDLSTYQVCVRKDVEGKGGSVFMHDQCNEGCEIQISEPKNLFPLAETGNKHILIAGGI GITPFLPQMDELAARGAEYELHYAYRSPEHAALLDELKQKHAEHVFSYVDSEGSMLNLDE LISSQPKGTHVYVCGPKPMIDAVIDCCNKHRYRDEYIHWEQFASTVPEDGEAFTVVLAKS NQEIEVQSNQTILQAIETLNIDVECLCREGVCGTCETAILEGEAEHFDQYLSDAEKASQK SMMICVSRAKGKKLILDL >gi|333032471|gb|GL891955.1| GENE 21 22867 - 23895 1021 342 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2956 NR:ns ## KEGG: ABAYE2956 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 342 37 378 378 591 100.0 1e-167 MTEQKNSSKTTALAQALLLEQVEFFKKQLSIENSPIYFRQFIQLFMQHADEIKLYEVVDL EQLQAVVKRYAFEMQLGAGLLEFIGEIAQRIYLSAMKSPVQLQDLVSDHQFEMWLSKFLE MEHIPHYLNQFLRTSPSVQQLCQYIATSTLEQKLPKFLTASRVDDYHFEWQHKLKKFSFL QQQRLEHKLETWIAGFIHEQLTELSLLSAEDLESLVRHIWEDIRHKKIYEFMKQLTPLDV EEFFVLIYEYWKELRQSQFMQGLILYGVEVFYDFYKDQSLFEVLSAIGLSETDLQTEALR FYPKVMDAFNEHGILEPLLQALLAPFYQSSKTLDIIEKHFSE >gi|333032471|gb|GL891955.1| GENE 22 23888 - 25513 1964 541 aa, chain - ## HITS:1 COG:YPO2912_2 KEGG:ns NR:ns ## COG: YPO2912_2 COG0171 # Protein_GI_number: 16123101 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Yersinia pestis # 253 537 7 291 296 365 61.0 1e-100 MKSFKVALAQFSPHIGNIDSNTQKMIEQANQAKKQDADLIIFPELSVIGYPAEDLLLRPN LNKRMQKAFAQLSEVKDIVMVFGFVNQTEDGQRYNSAAVMKDGQVLGVFNKHNLPNYGVF DEKRYFQKGHQHLVFEYLGHKFGVLICEDIWSINTVKQLSQLNVDTVLVLNSSPYEVGKP QHRKQTLSELAKQLHLNIVYVNQVGGQDDLIFDGTSFVSNQNGEIALQAPSFKEDLYIAE FDRDTKLYKVVESAPALETFAEIYQGLVMATRDYVERSGFPGVILGLSGGIDSALTLAIA VDAIGAERVQAVMMPYTYTSQISVEDAAEQARRMGVTFGIAEIHSIVNSFMQTLYPFFGN SPADATEENLQARARGTLLMGLSNKFGNLVLSTGNKSELSVGYCTLYGDMVGGFAVLKDV YKTIVFELAKYRNSLSETPVIPERVITRPPSAELRPDQKDQDSLPAYDVLDAILYAYIEE DLGQADIIAKGFDKEVVEKVIRLVDRNEYKRRQGAIGPRITSRAFSRERRYPIVNGWTAN D >gi|333032471|gb|GL891955.1| GENE 23 25898 - 26434 311 178 aa, chain - ## HITS:1 COG:PA0262_2 KEGG:ns NR:ns ## COG: PA0262_2 COG4253 # Protein_GI_number: 15595459 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 32 161 308 435 463 102 41.0 5e-22 MFTLNAFKIVIYRQFIIFTLFIFRHLKSYPIRFLTPEEKALAQRVFGSLLDCERPKIIAT RYLPWQAHGILMAPNGNIYVNLSDYSSNYALESKFIQGIFIHELAHVMQYQRGIHVLLKG ALLQSAYYLSFKYYNPYKYTYHPQKAFSSYNIEQQGEIARDICSGKLPNIICLPQLDL >gi|333032471|gb|GL891955.1| GENE 24 26549 - 27409 847 286 aa, chain - ## HITS:1 COG:PA2418 KEGG:ns NR:ns ## COG: PA2418 COG1741 # Protein_GI_number: 15597614 # Func_class: R General function prediction only # Function: Pirin-related protein # Organism: Pseudomonas aeruginosa # 1 286 1 284 286 290 50.0 2e-78 MKSLAFIHRNDTRFAVGDFYPVLSVFSYHELGNTLSPFLLLDHLGPGKIAPSMKRRGVND HPHRGFETVTLVYAGELEHKDSSGGGGFISAGDVQWMTAASGVIHRELFSEEYSRSGGPF EMIQLWVNLPAANKMNSPRYQSLKKAEIPMVKLENEAGFVRIIAGQFKHVMGPALTHTPI TVLDVELQAGQQAAFPAQSGETALVYLRSGRAQFHKDEDVLEEQGLAVMSNQGEHFSITA LQNCKLLILTGQPIAEPINGHGPFVMNTYDEILQAYDDIKNGRFAK >gi|333032471|gb|GL891955.1| GENE 25 27580 - 28032 407 150 aa, chain - ## HITS:1 COG:PA0661 KEGG:ns NR:ns ## COG: PA0661 COG1981 # Protein_GI_number: 15595858 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 8 148 2 139 140 119 53.0 2e-27 MDAPSDAFLWVKALHIIAVVCWFAALFYLPRLYVYHAMSDDATSHQRFEVMERKLYRGIM WPSMIATLITAHFLVDWGDATRHYHEATWFYLKVGLVALLVIYHLVCGYYRKKLIGNAHY KSHKFWRFFNEMPTLILFAVVILVVVKPQF >gi|333032471|gb|GL891955.1| GENE 26 28051 - 29280 1394 409 aa, chain - ## HITS:1 COG:PA1609 KEGG:ns NR:ns ## COG: PA1609 COG0304 # Protein_GI_number: 15596806 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: 3-oxoacyl-(acyl-carrier-protein) synthase # Organism: Pseudomonas aeruginosa # 1 407 1 403 405 409 55.0 1e-114 MKRVVITGMGINSCIGNSLEEVTHSLKNGISGTRFNPTYAELNFKSHVSAAAEQDFDNID RKLKRFMGVCAMYAYNSAVAAVEHAGLKAEDLADNPRYGIAGGSGGGSTASVVEMTELLE TKGARKVGPFFVPRNMTNTITANVGVAFKLQGIAHSIASACATSADAIGYAYNLIALGKQ DLMLAGGGEEDHWSQSLLFDAMGALCSKYNDTPETASRPYSKDRDGFVIAGGGGFVVLES LEHAQARGANILAEVVAYAANSDGADMVAPSGEGATRCILMALEEAKQHGVDKIDYVNTH GTSTPAGDVTELKAMERAFGEGKVPPLSSTKSMTGHSLGAAGVHEAIYSVLMLQNDFIAP NINVTELDEGTEGFDIVLEKRDTKLNTVMSNSFGFGGVNACLIFKKWDA >gi|333032471|gb|GL891955.1| GENE 27 29577 - 30902 1282 441 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00814 NR:ns ## KEGG: ACICU_00814 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 441 1 441 441 798 100.0 0 MTKFNNNQSDNLFSQVFGVAKKLSSTGLNILQQSQIGEVSKLVEPLSNGKTVEGSARNKS PFEVEQYESPQQMLREHLPKVTRQVFGRHFRKVNGIATFISPDWNEKISSYLFDWLNDFS SKSTLTEKILEEAGAKDLFELTKDTSRSQRLSQALIEQNKLIASIQGAITGVSGMVGAAV DIPVSLVLVLRTIYQTGRSHGFDLTEATDQDVVEFIFKEVDISLIAEKQTLLLALKALRN MLETQDIQQFQQVLGSSNDIETLKSWLVDENGEFKWNWLNKVPQLAVVGKFTPVAGAVLS AVYSWKLQEDVGHKAQAIFGAARHYLNEHPNEHLSPLQAYYAAVTLIQKASPRLLNVGEN GSVHATQHHKIENHDVISKVSVVVKSNTSEKSEEKVQENVHQGIEHLAEKHVVEHEHSEQ KPALEPESEENDDVIEGQKYS >gi|333032471|gb|GL891955.1| GENE 28 31103 - 31477 646 124 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162286748|ref|YP_001083900.2| 30S ribosomal protein S12 [Acinetobacter baumannii ATCC 17978] # 1 124 1 124 124 253 100 1e-66 MATTNQLIRKGRTTLVEKSKVPALKACPQRRGVCTRVYTTTPKKPNSAMRKVCRVRLTSG FEVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDCAGVKDRNQSRSKYGAK RPKK >gi|333032471|gb|GL891955.1| GENE 29 31637 - 32107 780 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162286747|ref|YP_001083901.2| 30S ribosomal protein S7 [Acinetobacter baumannii ATCC 17978] # 1 156 1 156 156 305 100 3e-82 MPRRRVVAAREILPDPKFSSQTIAKFMNHVMQDGKKSIAESIVYGALERVQEKNKVDPVE FFETTLEKVRPMVEVKARRVGGATYQVPMEVRPSRRTALAMRWLVDAAAKRSEKTMALRL AGELLDAAEGKGAAIKKREDVHRMAEANKAFSHYRF >gi|333032471|gb|GL891955.1| GENE 30 32142 - 32204 100 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHTVARFNIALYQSGGFAGI >gi|333032471|gb|GL891955.1| GENE 31 32286 - 34424 2563 712 aa, chain + ## HITS:1 COG:YPO0202 KEGG:ns NR:ns ## COG: YPO0202 COG0480 # Protein_GI_number: 16120541 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Yersinia pestis # 1 699 1 697 702 1026 73.0 0 MARQTPITRYRNIGISAHIDAGKTTTTERILFYTGVSHKIGEVHDGAATMDWMEQEQERG ITITSAATTCFWSGMGNQFPQHRINVIDTPGHVDFTIEVERSMRVLDGACMVYCAVGGVQ PQSETVWRQANKYKVPRLAFVNKMDRTGANFFRVVEQMKTRLGANPVPIVVPIGAEDTFT GVVDLIEMKAIIWDEASQGMKFEYGEIPADLVDTAQEWRTNMVEAAAEASEELMDKYLEE GDLSKEDIIAGLRARTLASEIQVMLCGSAFKNKGVQRMLDAVIEFLPSPTEVKAIEGILD DKDETKASREASDEAPFSALAFKIMNDKFVGNLTFVRVYSGVLKQGDAVYNPVKSKRERI GRIVQMHANERQDIDEIRAGDIAACVGLKDVTTGDTLCDEKNIITLERMEFPDPVIQLAV EPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREFGVE ANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLDVEAAGKEYEFAEEVV GGVVPKEFFGAVDKGIQERMKNGVLAGYPVVGVKAVLFDGSYHDVDSDELSFKMAGSYAF RDGFMKADPVLLEPIMKVEVETPEDYMGDIMGDLNRRRGMVQGMDDLPGGTKAIKAEVPL AEMFGYATQMRSMSQGRATYSMEFAKYAETPRNVAEGIIAKFQAGGKKGDDE Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:50:45 2011 Seq name: gi|333032470|gb|GL891956.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld565, whole genome shotgun sequence Length of sequence - 3365 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 550 - 849 242 ## ABAYE2702 hypothetical protein 2 1 Op 2 . + CDS 858 - 1316 405 ## COG2944 Predicted transcriptional regulator + Term 1333 - 1366 3.1 + Prom 1339 - 1398 4.0 3 2 Op 1 . + CDS 1421 - 2101 588 ## ABAYE2700 hypothetical protein 4 2 Op 2 . + CDS 2103 - 2366 190 ## ABAYE2699 hypothetical protein + Term 2451 - 2479 2.3 + Prom 2381 - 2440 6.2 5 3 Op 1 . + CDS 2494 - 2871 314 ## ABAYE2698 bacteriophage protein 6 3 Op 2 . + CDS 2853 - 3363 461 ## COG5281 Phage-related minor tail protein Predicted protein(s) >gi|333032470|gb|GL891956.1| GENE 1 550 - 849 242 99 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2702 NR:ns ## KEGG: ABAYE2702 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 99 6 104 104 183 100.0 2e-45 MCLTLTEAKQKLRAFARDTSKIKLTAHAKERMKERCISMKQIICCFEHGDITEGPYPNTR GDCQLNVSVRTAGEYITTAVAIKQSENGEFSVVVTTFRE >gi|333032470|gb|GL891956.1| GENE 2 858 - 1316 405 152 aa, chain + ## HITS:1 COG:XF1710 KEGG:ns NR:ns ## COG: XF1710 COG2944 # Protein_GI_number: 15838311 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 110 1 109 110 90 40.0 1e-18 MYHYEECGLSNIWLRNGFTIENDEDYGELVSIESVHELHNAIGLFLITQKPDLNGEEIRF LRKELNLSQKNLAGLLGVSETSIRHWEADRGLIGKPTELLLRALYKEHVQGDGKLRSMIE SLNHQERTLVPSEISFSYGNNHSWHQTNCEIA >gi|333032470|gb|GL891956.1| GENE 3 1421 - 2101 588 226 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2700 NR:ns ## KEGG: ABAYE2700 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 226 4 229 229 434 100.0 1e-120 MKKILAAGLIGLGLVGCATPAYNYQAIPKNISKPPIGSVNKAFVGDQMLEQGMVVDREVL NVPENIKISFAYSLTSGIYLKTGKNEKGQYFQPFNTVSGGGMVQKNPLADPFKVVMLDTE GKLCVVTVFNAKNCTDKHQATMKTVAIASDNSFQQTLIYSGKFGNKINVGYREFSSNQAR PAFNNDVEYDLSQSKQIGYKGALLEVIDATNQDITYKVLKNFNKVD >gi|333032470|gb|GL891956.1| GENE 4 2103 - 2366 190 87 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2699 NR:ns ## KEGG: ABAYE2699 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 87 1 87 87 160 100.0 2e-38 MSAPQYKPMRESEVCNAIGWVLIALGFIAGFLFILAFGRIEVASYYGKETVWSGVMIATG IGIIFNGFLAGYLFQKVASILRYHENK >gi|333032470|gb|GL891956.1| GENE 5 2494 - 2871 314 125 aa, chain + ## HITS:1 COG:no KEGG:ABAYE2698 NR:ns ## KEGG: ABAYE2698 # Name: not_defined # Def: bacteriophage protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 101 1 101 1435 182 100.0 3e-45 MAQESRLVIVIDSQNAERNARNLGNELVSIERKGEFASKSMDSLSVATRALAGHMAGLLT VGSAISKMDTYTGLQNRLKLVTNNQVELNKATEDTFRIAQKPPPLNLLALNVKVSLHLSL WTAYL >gi|333032470|gb|GL891956.1| GENE 6 2853 - 3363 461 170 aa, chain + ## HITS:1 COG:RSc0873 KEGG:ns NR:ns ## COG: RSc0873 COG5281 # Protein_GI_number: 17545592 # Func_class: S Function unknown # Function: Phage-related minor tail protein # Organism: Ralstonia solanacearum # 29 168 89 228 1366 91 40.0 7e-19 MDSLSVATRALAGHMAGLVTVGAAISKMDTYTGLQNRLKLVTNNQAELNKATEDTFQIAQ KTYSAWDSVLQVYQRFSDNAKTLNLTMDDTARLTETVSKAVAISGASAEAADAALVQFGQ ALASGTLRGEELNSVMEQTPALAKAIAKGMGITVGELRSVAAEGKITSQE Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:51:40 2011 Seq name: gi|333032469|gb|GL891957.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld575, whole genome shotgun sequence Length of sequence - 148469 bp Number of predicted genes - 146, with homology - 143 Number of transcription units - 80, operones - 36 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 930 509 ## COG3344 Retron-type reverse transcriptase 2 1 Op 2 . - CDS 985 - 1320 89 ## gi|332876359|ref|ZP_08444128.1| hypothetical protein HMPREF0022_03781 - Prom 1554 - 1613 8.3 - Term 1377 - 1429 4.7 3 2 Op 1 . - CDS 1662 - 1823 58 ## ACICU_01352 hypothetical protein - Prom 1861 - 1920 3.0 4 2 Op 2 . - CDS 1969 - 2100 92 ## ACICU_01353 hypothetical protein - Prom 2197 - 2256 4.8 + Prom 2195 - 2254 4.5 5 3 Tu 1 . + CDS 2394 - 2996 243 ## ACICU_01354 TetR family transcriptional regulator + Prom 3096 - 3155 6.5 6 4 Tu 1 . + CDS 3197 - 3823 416 ## AOLE_12805 hypothetical protein + Term 3859 - 3892 -0.5 + Prom 3859 - 3918 4.2 7 5 Op 1 . + CDS 3942 - 5006 978 ## COG0753 Catalase 8 5 Op 2 . + CDS 5019 - 5591 590 ## COG3038 Cytochrome B561 + Term 5692 - 5739 10.9 - Term 5680 - 5724 11.1 9 6 Op 1 . - CDS 5731 - 6015 397 ## COG5470 Uncharacterized conserved protein 10 6 Op 2 . - CDS 6078 - 6740 767 ## COG1802 Transcriptional regulators - Prom 6845 - 6904 5.0 + Prom 6792 - 6851 7.3 11 7 Op 1 . + CDS 6893 - 7495 766 ## ABBFA_002166 hypothetical protein 12 7 Op 2 4/0.189 + CDS 7464 - 8255 826 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 13 7 Op 3 3/0.270 + CDS 8286 - 9218 999 ## COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 14 7 Op 4 1/0.514 + CDS 9221 - 10258 1306 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 15 7 Op 5 . + CDS 10270 - 11739 1438 ## COG1012 NAD-dependent aldehyde dehydrogenases + Prom 11757 - 11816 3.3 16 8 Op 1 . + CDS 11862 - 12005 92 ## ACICU_01365 hypothetical protein 17 8 Op 2 . + CDS 12044 - 13450 1193 ## COG1457 Purine-cytosine permease and related proteins 18 8 Op 3 . + CDS 13476 - 14645 1103 ## ACICU_01367 hypothetical protein + Prom 14659 - 14718 5.7 19 9 Op 1 . + CDS 14784 - 16241 1644 ## COG1012 NAD-dependent aldehyde dehydrogenases 20 9 Op 2 . + CDS 16238 - 16621 531 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 16631 - 16695 16.3 - Term 16628 - 16675 5.0 21 10 Tu 1 . - CDS 16685 - 17590 674 ## COG0583 Transcriptional regulator - Prom 17616 - 17675 4.2 22 11 Tu 1 . + CDS 17689 - 18285 673 ## COG1182 Acyl carrier protein phosphodiesterase + Term 18297 - 18346 9.9 - Term 18289 - 18328 3.6 23 12 Tu 1 . - CDS 18342 - 19157 625 ## COG1414 Transcriptional regulator - Prom 19258 - 19317 3.6 24 13 Tu 1 . + CDS 19299 - 20513 1370 ## COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases + Prom 20515 - 20574 8.8 25 14 Op 1 1/0.514 + CDS 20689 - 21411 656 ## COG2188 Transcriptional regulators + Prom 21415 - 21474 5.9 26 14 Op 2 7/0.000 + CDS 21503 - 22540 323 ## PROTEIN SUPPORTED gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 27 14 Op 3 17/0.000 + CDS 22563 - 23765 829 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components 28 14 Op 4 . + CDS 23759 - 25468 1125 ## COG1178 ABC-type Fe3+ transport system, permease component + Prom 25487 - 25546 1.9 29 15 Op 1 . + CDS 25570 - 26724 926 ## ACICU_01379 putative oxidase + Term 26727 - 26767 5.2 30 15 Op 2 2/0.378 + CDS 26790 - 27938 988 ## COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 31 15 Op 3 . + CDS 27965 - 28780 1046 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 28957 - 29002 3.2 - Term 28869 - 28911 3.5 32 16 Op 1 3/0.270 - CDS 28995 - 30245 1303 ## COG0477 Permeases of the major facilitator superfamily - Term 30260 - 30295 2.0 33 16 Op 2 . - CDS 30307 - 31458 1281 ## COG1960 Acyl-CoA dehydrogenases - Prom 31652 - 31711 5.9 + Prom 31656 - 31715 6.4 34 17 Op 1 . + CDS 31790 - 33007 1228 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase + Term 33067 - 33103 -0.8 + Prom 33015 - 33074 6.9 35 17 Op 2 . + CDS 33194 - 34039 950 ## COG1414 Transcriptional regulator + Term 34061 - 34103 6.9 - Term 34051 - 34089 1.4 36 18 Tu 1 . - CDS 34107 - 34916 587 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 34952 - 35011 7.2 + Prom 34964 - 35023 8.6 37 19 Tu 1 . + CDS 35138 - 36109 1192 ## COG2070 Dioxygenases related to 2-nitropropane dioxygenase + Term 36131 - 36171 5.1 38 20 Op 1 2/0.378 - CDS 36145 - 37317 866 ## COG0477 Permeases of the major facilitator superfamily - Term 37341 - 37380 -0.6 39 20 Op 2 2/0.378 - CDS 37381 - 38223 651 ## COG1414 Transcriptional regulator - Prom 38244 - 38303 5.3 - Term 38273 - 38317 7.6 40 21 Op 1 20/0.000 - CDS 38333 - 39538 1671 ## COG0183 Acetyl-CoA acetyltransferase 41 21 Op 2 3/0.270 - CDS 39553 - 41076 1685 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 42 21 Op 3 5/0.081 - CDS 41138 - 41899 705 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 43 21 Op 4 . - CDS 41929 - 42717 991 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 42853 - 42912 7.6 44 22 Op 1 3/0.270 + CDS 43029 - 44183 1320 ## COG1960 Acyl-CoA dehydrogenases + Term 44199 - 44233 6.2 45 22 Op 2 . + CDS 44242 - 45525 1255 ## COG0477 Permeases of the major facilitator superfamily 46 22 Op 3 21/0.000 + CDS 45573 - 46241 717 ## COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 47 22 Op 4 . + CDS 46241 - 46894 781 ## COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit 48 22 Op 5 . + CDS 46931 - 48247 1067 ## ACICU_01399 putative porin precurseur in catabolism of dicarboxylic acids 49 22 Op 6 . + CDS 48266 - 49483 1195 ## COG0477 Permeases of the major facilitator superfamily 50 23 Tu 1 . - CDS 49504 - 49938 511 ## COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism - Prom 50009 - 50068 10.9 + Prom 50043 - 50102 9.8 51 24 Op 1 . + CDS 50258 - 52060 1475 ## COG1960 Acyl-CoA dehydrogenases + Term 52068 - 52140 9.6 + Prom 52073 - 52132 5.8 52 24 Op 2 . + CDS 52257 - 53060 959 ## ACICU_01404 hypothetical protein + Term 53074 - 53117 10.5 - Term 53069 - 53098 1.4 53 25 Tu 1 . - CDS 53122 - 56604 4063 ## COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits - Prom 56683 - 56742 4.4 + Prom 56522 - 56581 4.9 54 26 Tu 1 . + CDS 56809 - 57750 689 ## COG0583 Transcriptional regulator + Term 57828 - 57859 1.1 - Term 57807 - 57855 -0.8 55 27 Op 1 3/0.270 - CDS 58002 - 58904 598 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases 56 27 Op 2 2/0.378 - CDS 58901 - 60892 2108 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 57 27 Op 3 5/0.081 - CDS 60904 - 61707 988 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 58 27 Op 4 6/0.027 - CDS 61717 - 63318 1853 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 59 27 Op 5 . - CDS 63343 - 64515 1395 ## COG1960 Acyl-CoA dehydrogenases - Prom 64597 - 64656 7.3 + Prom 64571 - 64630 9.5 60 28 Tu 1 . + CDS 64660 - 65277 491 ## COG1309 Transcriptional regulator + Prom 65304 - 65363 2.4 61 29 Op 1 2/0.378 + CDS 65389 - 67083 1547 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 62 29 Op 2 . + CDS 67154 - 67825 647 ## COG0500 SAM-dependent methyltransferases + Term 67956 - 67990 2.6 + Prom 67891 - 67950 2.9 63 30 Tu 1 . + CDS 68066 - 69352 1227 ## ACICU_01415 putative DcaP-like protein + Term 69580 - 69616 -0.9 - Term 69346 - 69394 1.7 64 31 Tu 1 . - CDS 69398 - 70636 912 ## COG2755 Lysophospholipase L1 and related esterases - Prom 70748 - 70807 4.3 + Prom 70665 - 70724 5.6 65 32 Tu 1 . + CDS 70748 - 71653 474 ## COG0583 Transcriptional regulator - Term 71377 - 71428 3.1 66 33 Tu 1 . - CDS 71655 - 71885 168 ## ABAYE2281 hypothetical protein - Prom 72006 - 72065 3.7 67 34 Tu 1 . - CDS 72074 - 72220 65 ## + Prom 72120 - 72179 2.3 68 35 Tu 1 . + CDS 72219 - 72428 114 ## 69 36 Tu 1 . + CDS 72915 - 73058 174 ## ACICU_01419 hypothetical protein + Term 73071 - 73119 2.6 + Prom 73112 - 73171 13.4 70 37 Op 1 . + CDS 73328 - 73756 337 ## ABBFA_002108 hypothetical protein + Term 73764 - 73812 2.2 71 37 Op 2 . + CDS 73844 - 74065 205 ## ACICU_01421 hypothetical protein - Term 74081 - 74123 5.5 72 38 Op 1 . - CDS 74150 - 74467 562 ## ACICU_01422 putative 17 kDa surface antigen - Prom 74487 - 74546 3.3 73 38 Op 2 . - CDS 74573 - 74794 273 ## - Prom 74956 - 75015 7.7 - Term 74993 - 75055 -0.9 74 39 Tu 1 . - CDS 75079 - 75558 381 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) - Prom 75699 - 75758 7.4 + Prom 75587 - 75646 13.3 75 40 Op 1 . + CDS 75874 - 77283 861 ## ACICU_01425 hypothetical protein 76 40 Op 2 . + CDS 77344 - 79482 2288 ## COG0753 Catalase + Term 79484 - 79542 9.2 - Term 79475 - 79526 12.8 77 41 Op 1 . - CDS 79539 - 80417 234 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 80485 - 80544 8.7 78 41 Op 2 . - CDS 80559 - 80969 360 ## ACICU_01428 hypothetical protein - Prom 80992 - 81051 8.7 + Prom 81369 - 81428 1.5 79 42 Tu 1 . + CDS 81457 - 82131 755 ## ABBFA_002099 hypothetical gene 48 protein + Term 82144 - 82192 13.5 - Term 82142 - 82170 2.3 80 43 Tu 1 . - CDS 82192 - 82428 352 ## ABBFA_002098 hypothetical protein - Prom 82593 - 82652 6.6 + Prom 82622 - 82681 8.1 81 44 Tu 1 . + CDS 82711 - 83322 497 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 82 45 Tu 1 . - CDS 83393 - 84004 491 ## COG1280 Putative threonine efflux protein - Prom 84078 - 84137 3.1 + Prom 83948 - 84007 5.3 83 46 Tu 1 . + CDS 84161 - 84616 607 ## COG1522 Transcriptional regulators 84 47 Tu 1 . - CDS 84675 - 86291 1545 ## ACICU_01434 hypothetical protein - Prom 86388 - 86447 2.8 + Prom 86317 - 86376 3.5 85 48 Op 1 40/0.000 + CDS 86487 - 89951 2890 ## COG0642 Signal transduction histidine kinase 86 48 Op 2 . + CDS 89948 - 90907 902 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 90948 - 91007 6.7 87 49 Tu 1 . + CDS 91051 - 91335 433 ## COG2388 Predicted acetyltransferase + Term 91355 - 91404 2.4 + Prom 91341 - 91400 8.6 88 50 Op 1 17/0.000 + CDS 91623 - 92282 427 ## COG0765 ABC-type amino acid transport system, permease component 89 50 Op 2 34/0.000 + CDS 92272 - 92937 517 ## COG0765 ABC-type amino acid transport system, permease component 90 50 Op 3 16/0.000 + CDS 92940 - 93671 551 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 91 50 Op 4 9/0.000 + CDS 93702 - 94562 886 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 94580 - 94617 6.2 92 50 Op 5 . + CDS 94645 - 95511 1023 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 93 51 Tu 1 . - CDS 95759 - 96694 939 ## COG0583 Transcriptional regulator - Prom 96839 - 96898 5.4 + Prom 96702 - 96761 3.2 94 52 Tu 1 . + CDS 96786 - 97424 532 ## COG1280 Putative threonine efflux protein - Term 97836 - 97889 9.6 95 53 Op 1 . - CDS 97891 - 99852 1930 ## COG0520 Selenocysteine lyase 96 53 Op 2 . - CDS 99827 - 100759 994 ## ABBFA_002081 hypothetical protein - Prom 100908 - 100967 8.0 97 54 Op 1 . - CDS 101000 - 101941 912 ## COG1045 Serine acetyltransferase 98 54 Op 2 1/0.514 - CDS 101960 - 102469 619 ## COG0607 Rhodanese-related sulfurtransferase - Prom 102567 - 102626 12.1 - Term 102660 - 102698 7.0 99 55 Tu 1 . - CDS 102708 - 103445 231 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 103690 - 103749 4.2 + Prom 103474 - 103533 5.0 100 56 Tu 1 . + CDS 103571 - 104491 611 ## COG0583 Transcriptional regulator 101 57 Op 1 2/0.378 - CDS 104529 - 105389 966 ## COG0625 Glutathione S-transferase 102 57 Op 2 1/0.514 - CDS 105423 - 106049 608 ## COG0625 Glutathione S-transferase - Prom 106075 - 106134 2.0 103 58 Tu 1 . - CDS 106169 - 107074 757 ## COG0583 Transcriptional regulator - Prom 107316 - 107375 4.5 + Prom 107104 - 107163 6.0 104 59 Op 1 23/0.000 + CDS 107185 - 107616 290 ## COG1380 Putative effector of murein hydrolase LrgA 105 59 Op 2 . + CDS 107630 - 108319 834 ## COG1346 Putative effector of murein hydrolase + Term 108344 - 108389 -0.4 106 60 Tu 1 . - CDS 108327 - 109817 1230 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 109847 - 109906 8.1 + Prom 109808 - 109867 3.3 107 61 Op 1 . + CDS 109933 - 110568 615 ## COG2808 Transcriptional regulator 108 61 Op 2 . + CDS 110611 - 111204 1015 ## PROTEIN SUPPORTED gi|184157778|ref|YP_001846117.1| acetyltransferase 109 62 Tu 1 . - CDS 111212 - 112399 1167 ## COG0477 Permeases of the major facilitator superfamily - Prom 112424 - 112483 5.9 + Prom 112714 - 112773 5.9 110 63 Op 1 . + CDS 112804 - 114483 1986 ## ACICU_01460 putative malonate decarboxylase subunit alpha 111 63 Op 2 . + CDS 114486 - 115367 909 ## COG1767 Triphosphoribosyl-dephospho-CoA synthetase 112 63 Op 3 . + CDS 115370 - 115669 374 ## ACICU_01462 malonate decarboxylase subunit delta 113 63 Op 4 . + CDS 115662 - 116513 1169 ## COG0777 Acetyl-CoA carboxylase beta subunit 114 63 Op 5 . + CDS 116510 - 117337 870 ## ACICU_01464 putative malonate decarboxylase subunit gamma 115 63 Op 6 . + CDS 117334 - 117936 446 ## ACICU_01465 phosphoribosyl-dephospho-CoA transferase 116 63 Op 7 . + CDS 117949 - 118887 880 ## COG0331 (acyl-carrier-protein) S-malonyltransferase 117 63 Op 8 . + CDS 118936 - 119355 532 ## ACICU_01467 putative malonate transporter 118 63 Op 9 . + CDS 119348 - 120112 1051 ## ACICU_01468 putative malonate transporter + Term 120139 - 120171 0.7 119 64 Op 1 . - CDS 120162 - 121079 750 ## COG0583 Transcriptional regulator - Prom 121116 - 121175 2.2 120 64 Op 2 . - CDS 121177 - 122595 906 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 122633 - 122692 8.1 - Term 122634 - 122674 8.1 121 65 Op 1 . - CDS 122694 - 122828 98 ## AOLE_11510 hypothetical protein 122 65 Op 2 31/0.000 - CDS 122843 - 123847 1125 ## COG1294 Cytochrome bd-type quinol oxidase, subunit 2 123 65 Op 3 1/0.514 - CDS 123840 - 125084 1052 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 124 65 Op 4 . - CDS 125112 - 125285 142 ## COG1271 Cytochrome bd-type quinol oxidase, subunit 1 - Prom 125476 - 125535 3.5 + Prom 125638 - 125697 6.9 125 66 Op 1 . + CDS 125939 - 126757 601 ## ACICU_01474 hypothetical protein + Prom 126773 - 126832 6.9 126 66 Op 2 . + CDS 126876 - 128171 1437 ## COG1960 Acyl-CoA dehydrogenases + Term 128184 - 128229 9.1 + Prom 128206 - 128265 10.2 127 67 Tu 1 . + CDS 128349 - 129740 1471 ## COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases + Term 129762 - 129803 3.1 + Prom 129796 - 129855 8.8 128 68 Tu 1 . + CDS 129936 - 131402 1263 ## COG0477 Permeases of the major facilitator superfamily + Term 131429 - 131467 6.6 - Term 131421 - 131450 2.1 129 69 Tu 1 . - CDS 131464 - 132648 819 ## ABAYE2213 hypothetical protein - Prom 132841 - 132900 9.3 + Prom 133023 - 133082 10.5 130 70 Op 1 6/0.027 + CDS 133108 - 134130 1036 ## COG4521 ABC-type taurine transport system, periplasmic component 131 70 Op 2 7/0.000 + CDS 134140 - 134934 727 ## COG4525 ABC-type taurine transport system, ATPase component 132 70 Op 3 5/0.081 + CDS 134931 - 135800 939 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 133 70 Op 4 . + CDS 135809 - 136690 841 ## COG2175 Probable taurine catabolism dioxygenase + Term 136704 - 136765 5.2 134 71 Op 1 . - CDS 136758 - 137492 563 ## COG4126 Hydantoin racemase 135 71 Op 2 . - CDS 137489 - 138958 1186 ## COG1953 Cytosine/uracil/thiamine/allantoin permeases - Prom 139200 - 139259 7.4 + Prom 139139 - 139198 7.9 136 72 Tu 1 . + CDS 139369 - 140106 790 ## COG1802 Transcriptional regulators + Term 140121 - 140173 -0.8 - Term 140099 - 140139 1.2 137 73 Tu 1 . - CDS 140146 - 141036 483 ## COG0583 Transcriptional regulator - Prom 141169 - 141228 7.7 + Prom 141150 - 141209 6.7 138 74 Tu 1 . + CDS 141232 - 141918 724 ## COG1335 Amidases related to nicotinamidase + Term 141936 - 142002 15.1 + Prom 141950 - 142009 3.3 139 75 Op 1 1/0.514 + CDS 142029 - 143903 1961 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 140 75 Op 2 . + CDS 143961 - 144122 117 ## COG4317 Uncharacterized protein conserved in bacteria + Term 144133 - 144185 1.3 - Term 144129 - 144165 2.5 141 76 Tu 1 . - CDS 144191 - 144619 539 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 144644 - 144703 6.5 + Prom 144622 - 144681 4.2 142 77 Tu 1 . + CDS 144704 - 145033 112 ## COG0640 Predicted transcriptional regulators 143 78 Tu 1 . + CDS 145138 - 146172 1019 ## COG0798 Arsenite efflux pump ACR3 and related permeases + Term 146211 - 146264 0.1 - Term 146199 - 146250 -0.3 144 79 Tu 1 . - CDS 146263 - 147165 889 ## COG0583 Transcriptional regulator - Prom 147209 - 147268 5.3 + Prom 147179 - 147238 6.6 145 80 Op 1 7/0.000 + CDS 147267 - 147827 481 ## COG2059 Chromate transport protein ChrA 146 80 Op 2 . + CDS 147827 - 148348 591 ## COG2059 Chromate transport protein ChrA + Term 148361 - 148404 4.4 Predicted protein(s) >gi|333032469|gb|GL891957.1| GENE 1 3 - 930 509 309 aa, chain - ## HITS:1 COG:alr1468_1 KEGG:ns NR:ns ## COG: alr1468_1 COG3344 # Protein_GI_number: 17228961 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Nostoc sp. PCC 7120 # 35 290 26 265 333 75 28.0 9e-14 MLFYDFLKEGFDFYFQEFKKKNINNYDKKYHTNYISIKEFEKDIKVNSENIFNSIKNNNY KFQSLYPIVIENKKELNKKPRLICIPTVRDRLIQMILIYYISIHLKNELAVLKSQDFSVS GVGILKARQKAKDLRNTKPYVLKTDISSFFDNIDRAKLLNEIKDVMPPDILYLFQSIIYC DPSIPYEYNKDYKKLIYSKLRKGVRQGMPISPLLASFYLNDFDEWLIKKKYKHVRYADDL IFFLDSEKQCKEVYREVSQELLKLNLTLPTLEENTKTQIISPKETVNFLGLDLRYENEKY NWYIPPHVI >gi|333032469|gb|GL891957.1| GENE 2 985 - 1320 89 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|332876359|ref|ZP_08444128.1| ## NR: gi|332876359|ref|ZP_08444128.1| hypothetical protein HMPREF0022_03781 [Acinetobacter baumannii 6014059] hypothetical protein HMPREF0022_03781 [Acinetobacter baumannii 6014059] # 1 111 54 164 164 215 100.0 8e-55 MAQAVWRYNIYRKIQWLIQFAVIITPVIIHTNQLVMCVFLEIIVLLFDILLWYNGSSMSQ EKMAINCSHCCKHLVRAKTQQCACQLNHDEGLASLITDEMSYVHVDNCAPF >gi|333032469|gb|GL891957.1| GENE 3 1662 - 1823 58 53 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01352 NR:ns ## KEGG: ACICU_01352 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 53 1 53 53 91 100.0 9e-18 MGGLLLSGGCKLEIGSPINIDGKSCLNKIQQYLATPLFQMISIISLKLNRYLN >gi|333032469|gb|GL891957.1| GENE 4 1969 - 2100 92 43 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01353 NR:ns ## KEGG: ACICU_01353 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 43 1 43 43 72 100.0 5e-12 MVAERERVRGLVSTPAHPKVSLSRPTATGGDWEFTHKTIPQKK >gi|333032469|gb|GL891957.1| GENE 5 2394 - 2996 243 200 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01354 NR:ns ## KEGG: ACICU_01354 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 200 1 200 200 390 100.0 1e-107 MPNLALPTRTLYVVNKAIDLFHHRGFHLIGVDRIVKESEITKATFYNYFHSKERLIEICL MVQKEKLQEQVVAMVEYDLSTPAIDKLKKLYYLHTDLEGPYYLLFKAIFEIKNSYPNAYQ SAMRYRTWLKNEIYSQLRVLNADASFTDAKLFVYMVEGTIIQLLSSDGAIEREKMLDYFL NSFVRNFSPCMFTHVDASKC >gi|333032469|gb|GL891957.1| GENE 6 3197 - 3823 416 208 aa, chain + ## HITS:1 COG:no KEGG:AOLE_12805 NR:ns ## KEGG: AOLE_12805 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 208 1 208 208 358 95.0 1e-97 MKFLKFLTFSTILTLSAHTYATVGGGQKIEVLGYQQKEKKLYVLRHYEDGRGRLPQLYYY LLNSKSPDKLIEVKSLYINPKTHKIDYDQDSTAFNKALNKIKRNLTPLIVSNSKTVKIQT LKTHQNQISSWFDPSGKITQYKTEYVVKSPSLQSKTHVAVHYSKAIKISQNYSVPKQNKR LVIVKYLGVPEETGYDIEDPVLLLPIKK >gi|333032469|gb|GL891957.1| GENE 7 3942 - 5006 978 354 aa, chain + ## HITS:1 COG:HP0485 KEGG:ns NR:ns ## COG: HP0485 COG0753 # Protein_GI_number: 15645112 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Helicobacter pylori 26695 # 55 339 38 313 314 110 26.0 4e-24 MNNLNFKTLKKYWLRFVGIAVIAGALVLAFAWTAGLFGHRTTSKTFLGDTLKNFDPGYRR AHGKGICFDGTYHSNGAAAALSKATVFAKSDIPAIGRFSIGSGNPHAADNSTATVSMALL LSPADHSQWRMKLNNFPYFPTRNAEGFLAQQKAFKPVPSTGKPDPALVEAFLKEYPEARK SIEQKAKMPLTGSFSGAEFYVVNAFILRAANGQEQPVRWSMRPHSKFISLTKEQRDQADH DFLFKDIKKRLAEGPLYWDLVLQLAEPGDPVNDPSQPWPKDRKEVIAGTLEVKNVTDQVN GACRDINFDPTLVPPGIELSDDPVLAARAAIYSQSYNARLREIGFGKATDAVGK >gi|333032469|gb|GL891957.1| GENE 8 5019 - 5591 590 190 aa, chain + ## HITS:1 COG:YPO2974 KEGG:ns NR:ns ## COG: YPO2974 COG3038 # Protein_GI_number: 16123155 # Func_class: C Energy production and conversion # Function: Cytochrome B561 # Organism: Yersinia pestis # 13 181 5 173 174 74 32.0 8e-14 MQNKSNDNAPRHFNLTARILHWLMAAAILAMLFIGVGMTTSMTWRPWLIDIHRPLGIAIL LLVIIRLINRLCYPIPPLPPSVPRWQAFLAHASHWLLYILMFSLPLLGWATLSAGNWPVT LFPGWDLPPIAPTNSTLYAWFRTLHGILAWLLFAVVIGHLSAALLHAWIYRDGVFSSMAL GPSSKKEEAD >gi|333032469|gb|GL891957.1| GENE 9 5731 - 6015 397 94 aa, chain - ## HITS:1 COG:SMc00411 KEGG:ns NR:ns ## COG: SMc00411 COG5470 # Protein_GI_number: 15964084 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 3 94 4 95 95 95 53.0 3e-20 MSAYWIAHVTIHDMEQYKQYMATAPQAFQKYGAKFLARGGASEVLEGQEFERHVVIEFPD METARECYFSPEYQLAKSKRQGCCDVMVSFVEGI >gi|333032469|gb|GL891957.1| GENE 10 6078 - 6740 767 220 aa, chain - ## HITS:1 COG:AGl1259 KEGG:ns NR:ns ## COG: AGl1259 COG1802 # Protein_GI_number: 15890750 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 220 24 240 245 183 44.0 2e-46 MNLKIENPPVTLRELCLDKVRNAIITGYFPSGKRLVERTLCEELGVSRSVVREVIRYLEA EGLVEILPNKGPIVSLLNWDIASQIYEIRLLLEQSAVVDCTKNLDEKTAEKLKLLLEDLK AAFAADDINLIIATSTRLYETIFTTANHHIAWEVVQRLNGRISRLRAMTMKSTKREISGY QRIKNMCEAIYLHKDPEKAKQAVAEHIAEAAAVAKNILDA >gi|333032469|gb|GL891957.1| GENE 11 6893 - 7495 766 200 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002166 NR:ns ## KEGG: ABBFA_002166 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 200 1 200 200 384 100.0 1e-105 MELIRKTVLHVETTYVDGGKEAAKPLKMVAAAAVIKNPWAGQGYVENLTPEIRRIAPILS EHLTKLILDEVGSGEAVEAFGKSAVVGLNGELEHASALIHTLHFGNTYRSAVGAKSYLAF NNTRGPANAPILIPMMDKNDEGRRSHYLTLQFAIPDAPAADELVVVIGAATGGRPHHRIG DRYKDLEELGHDVKNPAAVK >gi|333032469|gb|GL891957.1| GENE 12 7464 - 8255 826 263 aa, chain + ## HITS:1 COG:AGl1247 KEGG:ns NR:ns ## COG: AGl1247 COG0596 # Protein_GI_number: 15890744 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 259 34 279 286 252 53.0 4e-67 MMSKTLQLSNNRIAHYFEQGEGEPLVLIHGVGMQAAAWYPQIEYFSKHYHVISVDMPGHG QSTKLPADAKLQDFVEWTIEFITALNLGPVNLAGHSMGSLITTGVSVTRPDLVKRMAVLN GVYKRTPQARHAVIQRAEELKTGRIDVETPLQRWFGESEVERIAAAKVKTWLENVDLSGY TTAYSAFAQGDETYADDWSKITCPALVLTGTDDPNSTAEMALQMAKQAKHGTAIVIENER HMVNLTAPDKVNNAMQAWLETSV >gi|333032469|gb|GL891957.1| GENE 13 8286 - 9218 999 310 aa, chain + ## HITS:1 COG:SMa0793 KEGG:ns NR:ns ## COG: SMa0793 COG1853 # Protein_GI_number: 16262882 # Func_class: R General function prediction only # Function: Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family # Organism: Sinorhizobium meliloti # 11 309 18 317 320 232 39.0 6e-61 MSEMDTINKMRELRDAFGSFMTGVTVVTTCKEDGTPLGFTANSFASVSLDPALLLVSIAK TSSNYHNFANTTHFAINILAEEQKDVSNTFARPSEDRFANLSWSKSACQNPLIDHVSAWF DCTTYQVVDAGDHAILIGKVEDFASTGFAGLGYYRGGYFTPAKLSAEVISGPKVVMSAII GHENTILLEETADHKWTIPHVMVDKDGADKALEKIFAQYQPDASANFIYSVYENVENQQQ YISFLCNTPVAQATKGQFVDLNDLEKLEFVDSALESMLMRYRKENHLKTYGVYYGNQTTG TVRQIVKEEV >gi|333032469|gb|GL891957.1| GENE 14 9221 - 10258 1306 345 aa, chain + ## HITS:1 COG:SMa0794 KEGG:ns NR:ns ## COG: SMa0794 COG2141 # Protein_GI_number: 16262883 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Sinorhizobium meliloti # 1 345 1 345 346 535 71.0 1e-152 MRFSLFVHMERVSDQQTQKQLYDEMIELCQIADRGGMHAVWTGEHHAMNFTIAPNPFLNL VDLANKTKNVRLGTGTVVAPFWHPIKLAGEAAMTDIITNGRLDIGIARGAYSFEYERMVP GMDAWSAGQRLREMIPAIKNLWKGDYEHNGEFWQFPKTTSAPQPLQQPHPPIWVAVRDPN SHEFAVQNGCNIQVTPLHLGDEEVEKLMGHFNAACEKFSDVPRPEIMLLRHTYVADSEED AQLAADEINTFYNYFGAWFKNEREIKQGLIAPLSPEEIAAHPFYTPEAMRKNNVIGQAQE VIDRLKAYEAMGYNEYSFWIDTGMSFERKKASLERMINEVMPAFA >gi|333032469|gb|GL891957.1| GENE 15 10270 - 11739 1438 489 aa, chain + ## HITS:1 COG:SMa0796 KEGG:ns NR:ns ## COG: SMa0796 COG1012 # Protein_GI_number: 16262884 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Sinorhizobium meliloti # 5 489 4 487 487 690 70.0 0 MTADFQLYINGQFESGAATFESINPATGEVWAHMPEARTDEVNRAVQAASQALKAPEWAG LTASQRGKLLYKLADLIEKAAPQLAQIETSDTGKIIRETSSQIAYVAEYYRYYAGIADKL EGSFLPIDKADMQAWIVREPVGVVAAIVPWNSQLFLSAVKVGPALAAGCTVVLKASEDGP GPLLAFAKLVHEAGFPAGVVNVITGFGPECGAVLSSHPDVAHVAFTGGPETARHIVRNSA ENLAKVSLELGGKSPFIVFADADIQSAVNAQVAAIFAATGQSCVAGSRLLVEESIKDEFV QRLVERVQTIKIGLPHEMATEFGPLCTLRQRQKIEQVIASSIQQGAKLLTGGKSIERAGY YYPPTILDCTDAPQADCITTELFGPVLSVDSFKDEAEAVQKANSTPYGLAAGVFTTNLSR AHRMTKVIGSGIVWLNTYRAVSPLAPFGGHGLSGHGREGGANAVLDYTTTKTVWLRTSDE PIDDPFVMR >gi|333032469|gb|GL891957.1| GENE 16 11862 - 12005 92 47 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01365 NR:ns ## KEGG: ACICU_01365 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 47 1 47 47 80 100.0 2e-14 MLNQVLIGLALPFSWLKQHKQKYELFVKGNKKMKPSHIEMTLAGQIF >gi|333032469|gb|GL891957.1| GENE 17 12044 - 13450 1193 468 aa, chain + ## HITS:1 COG:BS_yxlA KEGG:ns NR:ns ## COG: BS_yxlA COG1457 # Protein_GI_number: 16080922 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus subtilis # 13 459 3 448 457 252 35.0 1e-66 MSQNENSNNAFAIESHSIDYVAPSERNGKVRDLFTLWFCTNIAPLAVITGAMSILTFNLN IVSALLAICCGHFFGAAILALTSAQGPQVGIPQMIQSRAQFGRYGALLVVLFTTLIYLGF FISNIILSGKTLHTVVPAIPVPTATVIGAIAATTIGVIGYHFIHKFNKIGTWFMGGSLLI GLMIMVPHINADVLAKGSFNMKGWFAMFGLCAVWQISFSPYTSDYSRYLPKSIGIYKPFI FTYLGASLGTIFAMAFGTIAVSIGSTTDAMEAVKSGTGLFGYVLMILFLCNIIGHNAMNL YGAVLSCITSIQTFAGQWMPSRNIRVVLSIIVLVLATLTALWASSNFISFFLNVIFALLF ILVPWVSINLLDFYVVNKKSYDIQSIFARDGGIYGKFNAKALTAYFIGIAVQIPFLKNAF FTGALADVIPDADISWVIGLVVSLVVYYVFNLGKIKCSAPALNAKLPQ >gi|333032469|gb|GL891957.1| GENE 18 13476 - 14645 1103 389 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01367 NR:ns ## KEGG: ACICU_01367 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 389 1 389 389 742 100.0 0 MKKSYLQVALSTALMAVIYPSYAGISFGNTDDEYGKLTVSGYVRANYQDKHYGESASDQK IRFDAAQLKLDYEHGPLFGHAEYRCYQYDRLCDFSTLVDGYVGYKLNKTDQVVAGVQPIP FGPGRFWGNSLYGSMSTTAGLEDVHNLGLNYHFELPTATKFDVGYFAVDGGSYTGSTQDS GRYTANYVSSDVPNKTDLQEKNMWVGRVTQDINLGINGLTTQLGGSYWTSDIENKAASSD GRRHAWALFGKANYGNLNVTLTGGKNDVTNQDQLNPNQSLMGSYDSEYYVANKGTFYTAD VGYTFKNVKQIGKITPYFMYSQYDKDQDSMKDSIRNIIGVSIDHKQLSLVAEYIMSKNDP FIGGTQDSLAKGDDNQWNKLLNLTLFYYF >gi|333032469|gb|GL891957.1| GENE 19 14784 - 16241 1644 485 aa, chain + ## HITS:1 COG:PA0265 KEGG:ns NR:ns ## COG: PA0265 COG1012 # Protein_GI_number: 15595462 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Pseudomonas aeruginosa # 1 483 1 483 483 624 63.0 1e-178 MQLNELALFRQQAFVAGKWCDADHQQTSEILNPATLEIIGTVPNMGKAEAERAIEAAKEA WPLWKNKTAKDRSIILKKWFDLIISNADELAFILTSEQGKPLAEAKGEILYAASFIEWFA EEAKRVYGDIIPSPYPDARIVVNKQPIGVVAAITPWNFPAAMITRKVAPALAAGCPCIVK PAPETPFTALALVDLAVQAGVPAEIFSVITGDAVHIGDAIFESDVVRKFTFTGSTPVGKM LLERSAKTLKKVSLELGGNAPFIVFDDADLEAAIEGALIAKFRNAGQTCVCVNRFLVQAG IYEKFIAALSQKIQNFNIGNGLEAGHDIGPLINANAVKKVEAHIQDALDKNGRLVVGGKK HKAGELFFEPTLIADVTADMDVATQETFGPLAAVFKFENEQQAVEMANATEFGLAAYCYT KDLGRAWRMSEQLEYGMVGINKGLISNEVAPFGGIKQSGLGREGSKYGIEDYLEIKYTLF GGLNI >gi|333032469|gb|GL891957.1| GENE 20 16238 - 16621 531 127 aa, chain + ## HITS:1 COG:YPO3649 KEGG:ns NR:ns ## COG: YPO3649 COG0599 # Protein_GI_number: 16123791 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Yersinia pestis # 1 126 2 127 131 151 53.0 3e-37 MSNEKFEKGLAIRKQVLGEEYVNNSINNADEFNLPLQELVTEYCWGAVWGREELSKPERS LINLAMISALNRPHELKLHVKGALRNGVPKEKIREVLLQVAIYCGVPAAVDSFRIAKEAI KEFESEQ >gi|333032469|gb|GL891957.1| GENE 21 16685 - 17590 674 301 aa, chain - ## HITS:1 COG:XF1132 KEGG:ns NR:ns ## COG: XF1132 COG0583 # Protein_GI_number: 15837734 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Xylella fastidiosa 9a5c # 1 299 1 299 301 236 41.0 3e-62 MQHELSAISIFVTVVEAGSFVKAAEQLHLTRSAISKNIARLEEQLGVALFKRTTRSLSMT DEGTLFYEHSRRTLSEIQNAAALLDQRKINATGRLRMSVPVLFGQLFAAPLMVKFAQQHA DLQLEISFNDRNVDLIEEGFDLCIRIGALPDTTQLVAKPIGEHRMLLCASPDYLNKRGPV EHIEDLDQHATIADPHFGQMQKWRLQKENDEPLFIKPKAKLLLNDLQAIKNAALADAGIA WLPDWLIQNELQDGKLVQVLETMSSTAFPIHLVWPTLPFMPLKTRLAIDYLAQHLPPELN K >gi|333032469|gb|GL891957.1| GENE 22 17689 - 18285 673 198 aa, chain + ## HITS:1 COG:STM1642 KEGG:ns NR:ns ## COG: STM1642 COG1182 # Protein_GI_number: 16764986 # Func_class: I Lipid transport and metabolism # Function: Acyl carrier protein phosphodiesterase # Organism: Salmonella typhimurium LT2 # 1 176 1 177 201 189 54.0 2e-48 MAKILVLKSSIMGEGSQTNRLIDVMLEHRKDQGVQDDITIRNLAEMNLPVLDLEIFQALR GAENVNQDIQQIVALSDELIAELKSADLLIIGAPMYNLNVPTQLKNWFDLVARARQTFRY TETYPQGLVEGVKAVVVSSRGGIHVGQETEAVTPYLKAVLGLMGIHDVDFIYAEGLDMQA YRSKALDLASQQVKEFAI >gi|333032469|gb|GL891957.1| GENE 23 18342 - 19157 625 271 aa, chain - ## HITS:1 COG:BMEII0642 KEGG:ns NR:ns ## COG: BMEII0642 COG1414 # Protein_GI_number: 17988987 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Brucella melitensis # 17 271 1 250 256 176 40.0 5e-44 MPSLDAFLEHPNSHEKIRQDDYIAGLAKGLALLEAFGTDRQRLNVTQVAERTGISRTAAR RYLKTLKYLGYLETDEHYFWLTHRVLRFSSSYLSSAHLPKVAQSFLNLLCAQTSLTFSIV VLDDNEVVPIARSYLPQQDNLRVNPYGMHLGNRLPAHATSTGKVLLAALSEEAQHTWVKT YGLKRLTPFTIVDESKFFEVLKGISLSDYCLSKEEHELGVIAIAVPVFNAQGQAIAALNC MSQTNRVQEDYLVQQILPLLRNTANELRNVI >gi|333032469|gb|GL891957.1| GENE 24 19299 - 20513 1370 404 aa, chain + ## HITS:1 COG:PA0247 KEGG:ns NR:ns ## COG: PA0247 COG0654 # Protein_GI_number: 15595444 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 4 393 1 391 394 521 63.0 1e-148 MDILKTQVAIIGSGPAGLLLGQLLYKAGIDHIIVEQRSAEYVASRIRAGILEQVSVDLLK QAGVDQNLKEKGLPHSGIEILTNGELHRVDLAALTGGKQVTVYGQTEVTKDLMTAREAAQ LTSYYEAHNVQVKDFYTAPKVEFEYQGKAFQIQCDFIAGCDGYHGVCRASVPEDKIKTFE KVYPFGWLGLLADVPPVADELIYVQSERGFALCSMRSETRSRYYLQVPLTDHVEDWSDEK FWDELKNRLDPESREKLVTGPSIEKSIAPLRSFVTEPMRFGKLFLAGDAAHIVPPTGAKG LNLAASDIAYLSSALIEYYAEGSEQGINEYSEKCLQRVWKAERFSWWMTHLLHRFETESE FDHKIKQAELSYVLGSIAGKTTLAENYVGLPYEIKQIDSFKHAS >gi|333032469|gb|GL891957.1| GENE 25 20689 - 21411 656 240 aa, chain + ## HITS:1 COG:PA2802 KEGG:ns NR:ns ## COG: PA2802 COG2188 # Protein_GI_number: 15597998 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 238 1 234 239 183 41.0 3e-46 MEQDQARIPKYIPIRDAIAHDIESGVLEAHAKLPSERVLSEQFQTTRVAAREALLALETD GLIYRLDRRGWYVRSPRIIYHPQSTKNFNQFVIEQGYEPSTEVISSELTTATSWDAKHLK VEKGHPIYSVWRRRCINGRPVLVEHLRVNAELFPEFLTHDLKQSITLLMANQYNCHITRA DINLYPTALSEQQAKALHVNVGALGLYICRSNRNEEGVITDVDQEYWLHDVLDLHFEARA >gi|333032469|gb|GL891957.1| GENE 26 21503 - 22540 323 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] # 29 339 22 338 346 129 26 1e-28 MKQYVQQTIKLGTASVLGVVVAIQMGCSSATSKQSEEITVYTAVEADQLKQYQEELHKAY PELKVKWVRDSTGVITAKLLAEQKNPQADVVFGVALTSLLVMEKKDMLEPFKPEGIQNLK PEFVSQKPVPTWTGMDAWESAICVNKVELEKRKLPIPKTWKDLTNPIYKNLIVMPNPASS GTGYLDVTAWMQIWGEKQAWDYMQALDKNISQYPHSGSKPCKMAAQGEIPIGVSFGYPAF KLKAEGAPLEVVYPTEGLGWEMEASAIVKGTKKLSSAQKFINWSVSKAANEAYAHNFSMV AYKGIENTTMDFPKNLPQMLIKNDFYWAAEQRERILAEWSKRFEK >gi|333032469|gb|GL891957.1| GENE 27 22563 - 23765 829 400 aa, chain + ## HITS:1 COG:mll3065 KEGG:ns NR:ns ## COG: mll3065 COG3842 # Protein_GI_number: 13472692 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Mesorhizobium loti # 41 352 6 317 354 301 50.0 2e-81 MQIPSSLQSSLLGQNQKAELTGHLLSTLTTYKYPEHGPSVLEVMDIQKKFQHFQALTHIN LDLKAGEFVSFLGPSGCGKTTLLRIIAGLEKPDYGKVIKKGADITLLSAEKRHCGIVFQN YALFPNLNVEENIAFGLDKKKCDKAQRSQRVQQLLELIELPDIAKKYPNQLSGGQQQRVA LARAIAPKPDILLLDEPLSALDAQVRLNLRQKIRSIQSQLNLPTIMVTHDQEEALSISDR VVVMNHGVIEQIDTPHNIYYKPQTQFVAKFIGTMNFLKATCAVPNQLEVLGFIPLNLEQQ KLKAGENYSIGFRPEAVELVDDFGSDKESLYLPVKVLSTEFLGAKRRLFCAIHIDGIEQA KHLLQIEIENIKFKSLQELMFIKVPNQLIHVFDEQGYALC >gi|333032469|gb|GL891957.1| GENE 28 23759 - 25468 1125 569 aa, chain + ## HITS:1 COG:SMb21542 KEGG:ns NR:ns ## COG: SMb21542 COG1178 # Protein_GI_number: 16264731 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, permease component # Organism: Sinorhizobium meliloti # 59 565 162 668 680 461 46.0 1e-129 MLNEAASAVLKTQPRRKTEYSLRSNVALAAVAIALTLAIIAPLMMLFETAFFDENQNFVG LENFYNYFVSPALLSSVFNSVWVACAATVITVFLASIYAFALTNVNIKGKGFFKLVAFLP ILAPSLLPSLALVYLFGKQGVFKPLLGDIQIYGPIGILISYCFWLFPAILMLMMVSFRSV DQRLIEASLSLGKNIWKTHYHVTLPAIRYGLISASLVAFIYVLTDFGIPKVIGGSFNMMA LDVYKQIIGQQNMSMGAVISILLLLPAVFVFIFDRIQSKRHARFQAFQTKPYVSASNKKL EVVLSIFCGLVSGSILLIVFTAVLASFIQSWPYDLSLTLAHYSFEYVDGGGWAAYFNSVR MALFSTVFGTALIFMVALLTERFKAHPLIKNYVQALVLLPLAVPGLVLGIAYILFFNQQS NPLNVLYGTMTILVISTIVHYYTVPHLTLTNAIKQIPLQLDQAAQTLGTSKWKTFWKVYL PMCFPALCDVSVYIFVNAMTTVSAAIFLYSPDTSLAAVAVLNMDDAGDTVAAVAMSILIL TTSCVVKLIHWLFTRKIMARSQQWRESAH >gi|333032469|gb|GL891957.1| GENE 29 25570 - 26724 926 384 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01379 NR:ns ## KEGG: ACICU_01379 # Name: not_defined # Def: putative oxidase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 384 1 384 384 758 100.0 0 MNNAQFDLIVVGAGILGLSAAIQAQEQGLKVCIFEKNAKPVGATRRNFGMVGTSTLTHPE QQWRKYALETRSFYQRIQTETDISFAQRQGVYLANTALEWQVLNEFAERANNYQIPVHLF SHEELVTQFSYLNPSQQFQGGLVFEEDYSVEPHVVGQRLLAYAERKGVNIYTNACVVQTQ YQHEICQVRLASGEAYRANKVLICHGEIIDVLYPDLLQSLNLKRCGLQMALTQRFHQKLN ASLYSGLSISRYPAFEICPSHAELVKASQQGFIKEFGIHILIKQNEFGELIVGDSHEYHS INEAPQFEQREEINEFIQVYCHEKLGLNLPPIQKRWNGYYLTHEHELACVTEAEKNIFLV SAIAGKGMTTGAGFMKEILEQNIY >gi|333032469|gb|GL891957.1| GENE 30 26790 - 27938 988 382 aa, chain + ## HITS:1 COG:VCA0604 KEGG:ns NR:ns ## COG: VCA0604 COG0075 # Protein_GI_number: 15601362 # Func_class: E Amino acid transport and metabolism # Function: Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase # Organism: Vibrio cholerae # 11 368 1 358 367 456 61.0 1e-128 MNMQPQLDMDLENKYLLLTPGPLSTSATVRRAMQKDWCTWDQEYNSLVQDIRNRLVKLAT SEPEKYTAVLMQGSGSFAVESVLGSAIPRDGKILIINNGAYGARMVQMARCLNIEVIELN YLETQTPDLQEVERVLKDKTISHVACVHCETTTGILNPIQEIGRLVKAAGKIWIVDAMSS FGGVPMDMAELEIDFLISSANKCIQGVPGFGFILAKRDCLEACKGLARSVSLDLYDQWNT MEQHNGKWRFTSPTHVVRAFYQALLELETEGGVAARYQRYLQNQQTLSKGMQQLGFELVL GEECLQSPIITTFLYPTAEKFSFQSFYETLKKSGYVIYPGKVTDLNCFRIGNIGEVYIQD IEGLLAAIASYCENHLNQAVTA >gi|333032469|gb|GL891957.1| GENE 31 27965 - 28780 1046 271 aa, chain + ## HITS:1 COG:VCA0606 KEGG:ns NR:ns ## COG: VCA0606 COG0637 # Protein_GI_number: 15601364 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Vibrio cholerae # 5 271 3 271 271 247 49.0 2e-65 MTTNNTQIQAVVFDWAGTTVDFGSRAPILAFMALFKDNKVEITVEEARAPMGLEKRDHIA AVLKMPRVAAAWQEVYGQAATEADIDRLYKDFIPYQLNSIPKCSALIPGALATFENIKKR GAKIGSNTGYASMMIGRLVKDAADQGYRPDCIVTASDVKYGRPYPEMLWKNLIQLDVSDI KTVVKVDDTVVGIDEGLNAGCWTVGLAISGNEVGLSYEEWSALSADEQIVLKDKAYQKMN ASGAHYVIDSVADLPNILDDIERRLEQGERP >gi|333032469|gb|GL891957.1| GENE 32 28995 - 30245 1303 416 aa, chain - ## HITS:1 COG:PA1019 KEGG:ns NR:ns ## COG: PA1019 COG0477 # Protein_GI_number: 15596216 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 12 415 14 423 451 473 60.0 1e-133 MATNYKDGFSRIQPHTWKIAFIFAFLALLVDGADLMLLSYSLNSIKADFGLSSVQAGMLG SFTLAGMAVGGIFGGWACDKFGRVRIVVISILTFSLLTCGLGFTQSFLQFGILRFFASLG LGSLYIACNTLMAEYVPTRYRTTVLGTLQAGWTVGYIVATLLAGWIIPDHGWRMLFYVAI IPVVIAVLMHVLVPEPEAWQKSRLQQPVMAQNASKTSAFKLIFQDKRNRNMFILWALTAG FLQFGYYGVNNWMPSYLESELGMKFKEMTAYMVGTYTAMILGKVLAGMMADKLGRRFTYA FGAIGTAIFLPLIVFYNSPSNILYLLVTFGFLYGIPYGVNATYMTESFGTAIRGTAIGGA YNVGRLGAALAPATIGFLASGGSIGLGFVVMGAAYLICGVIPALFIKEKIYDPQKS >gi|333032469|gb|GL891957.1| GENE 33 30307 - 31458 1281 383 aa, chain - ## HITS:1 COG:PA1631 KEGG:ns NR:ns ## COG: PA1631 COG1960 # Protein_GI_number: 15596828 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 382 1 382 384 604 78.0 1e-172 MIRDQETLNQLVDMIRQFVEGVLIPHENEVAETDEIPPDIVEQMKALGLFGLTIPEEYEG LGLTMEEEVYVAFELGRTSPAFRSLIGTNNGIGSSGLIIDGTEAQKSFFLPRLARGEVIS SFCLTEPDAGSDAASLKTSAVKDGDFYVLNGTKRFITNAPHAGVFTVMARTNFDIKGAGG ISAFIVDSQTPGISLGKRDKKMGQKGAHTCDVIFENCRIPASALIGGVEGVGFKTAMKVL DKGRLHIAALSVGAATRMLDDSLNYAIERKQFGQPIAEFQLIQAMLADSKAEIYAAKCMV LDAARLRDAGQNVSTEASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLF RLYEGTTQIQQMIIARNMIRAAS >gi|333032469|gb|GL891957.1| GENE 34 31790 - 33007 1228 405 aa, chain + ## HITS:1 COG:BMEII1019 KEGG:ns NR:ns ## COG: BMEII1019 COG1804 # Protein_GI_number: 17989364 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Brucella melitensis # 1 404 3 408 415 597 69.0 1e-170 MGALNGIRVLDLSRVLAGPWCGQILADLGAEVIKIERPKVGDDTRSWGPPWMKDDSGQDT QEAAYYQSTNRNKLSVAIDIANPDGQELIKALIQDTDVVIENYKAGSLKKYGLDYESLSA INPKLVYCSITGFGQTGPRAEEPGYDFIIQGMGGLMSVTGERDDLPGGGPQKVGVAFSDL ATGLYSTIAIQAALLNRHVTGLGQYIDMALLDVQIATMANQGMNYLSSGNIPKRYGNAHA NIVPYQVFKASDRDFIIACGNDTQFIQLCRSIGLPDLPNDARFARNANRIKHRDEIIGIL QTHFLTKTADEWVDAIYAAKVPVGVINNLEQAFQEPQVIAREMLVEMNHPQREKLKVIGS PIKLSRTPVEYKTAPPLLGEHTQAVLGRIVSSEKLAELKEKGVIG >gi|333032469|gb|GL891957.1| GENE 35 33194 - 34039 950 281 aa, chain + ## HITS:1 COG:PA1630 KEGG:ns NR:ns ## COG: PA1630 COG1414 # Protein_GI_number: 15596827 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 6 276 12 283 288 360 62.0 2e-99 MNDAVDAEQTEKLLAPLRHELLHPIEDMQDENDRQFITALARGLELLRCFTPKHQHLGNQ ELAQMTGLPKPTITRLTHTLSRLGYIKQVPNSSKFQLSVGVLAFGYSMLSNVSIRSIAHP YMKNLADYAGAAVAMATRDRLNMIYLDVVQGKGNMTMRRQVGTYLPIHLSSMGRACLAAM PEDEREFLLNAIRNKHKEDWIKINRDLDKAFKDYQDFGYCFSIGEWHKDVNSVAVPLIHE QHGLLVFNCGGPSFIMNREKLEEDIAPRLLHMVNNIRTEIS >gi|333032469|gb|GL891957.1| GENE 36 34107 - 34916 587 269 aa, chain - ## HITS:1 COG:RSc0476 KEGG:ns NR:ns ## COG: RSc0476 COG1024 # Protein_GI_number: 17545195 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 24 266 11 252 254 195 42.0 8e-50 MQQNNKTQSELKTGTIHKYFDRNILTLTMSNATKKNAINYEMYAALSQALDQAATNQDIH VVVLTGEDSAFTSGNDVNAFEKRDTTTSEPPASIVFLKSLATFPKPIIAKVNGVAIGIGS TMLLHCDLVYASQNSIFQFPFVNLGLVPEAGSSYILPRLLGFARASEIILLGEKFSVEQA KNYGLVNEIFEANELDQVVEDVAIKLAHKPSQALQLSKKLLRDMPIDDLLNRIDHESTIF SHCLQGSEFKEALSAFKEKRKPNFHKQTA >gi|333032469|gb|GL891957.1| GENE 37 35138 - 36109 1192 323 aa, chain + ## HITS:1 COG:CC2990 KEGG:ns NR:ns ## COG: CC2990 COG2070 # Protein_GI_number: 16127220 # Func_class: R General function prediction only # Function: Dioxygenases related to 2-nitropropane dioxygenase # Organism: Caulobacter vibrioides # 1 323 3 324 325 368 58.0 1e-102 MKTKITELFEIEHPIIQGGMHYVGFAELAAAVSNAGGLGIITGLTQRTPENLAKEIARCR EMTDKPFGVNLTFLPTVNTPDYPGFVEAIIKGGVKIVETAGRNPEQVMPYLKAAGIKVIH KCTSVRHSLKAQQIGCDAVSVDGFECGGHPGEDDVPNMILLPLAADALDIPFVASGGMAD GRSLAAALAMGADGINMGTRFIATQEAPVHANVKQAILNATERDTRLIMRALRNTERVMN NAAVEKIVAKEKALGDNIKFEDIIEEVAGVYPKVMIDGDVNAGAWSCGLVASLIHDIPTC DELVNRIVKEAEDIIRGRLSGLL >gi|333032469|gb|GL891957.1| GENE 38 36145 - 37317 866 390 aa, chain - ## HITS:1 COG:YPO3263 KEGG:ns NR:ns ## COG: YPO3263 COG0477 # Protein_GI_number: 16123420 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 11 376 14 379 399 252 39.0 8e-67 MMKNALYTPTIILMAIAAGICTGGNYFSQPLIHSISVSLNLTETTTAWVPTLAQITYACG LLFLMPLGDIIEKRKLLFIFMLLASSGLIISGFSHNIYLLLLGTIITGLFSSAAQLLLPL AASLVPIQQSGRVVGFLLSGLMMGVLIARSLSGLMSTLFAWNIIYLVSGFLLLVIAFILH RNIGLFPPTKSENYAKTIRSLPQIFIQNRRLRTRTYIGGFTFACVSLTFTTMSLLLAPAP YFFSDFTIGLFGFVGVLGTFVANFSGKFIDQGYIHKISIYCGIGLILSWILFSLLPYHFA FYIIALLILYASLSAVHVTNQSIVFKLNQELRSRFNAIYMTGYFAGGALGTTAGSYAWKH FGWTGVCILGLIFAVLCLYYCVRDAKNQHN >gi|333032469|gb|GL891957.1| GENE 39 37381 - 38223 651 280 aa, chain - ## HITS:1 COG:PA1630 KEGG:ns NR:ns ## COG: PA1630 COG1414 # Protein_GI_number: 15596827 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 2 275 11 286 288 329 57.0 4e-90 MSQNTETEKPINFDEIRLDPISHIHRENNPQFIASLARGLELLRCFSANNQVLGNQELAK MTGLPKPTIARITNTLVSLGYLKQLPNSTKYTLDIGVLSLGYAALSNISIRNIAHQYMEE MSQYVQAPVAMATRDRLNMVYIDVVQIETALNMRRPIGSTLPLHSSSMGRACLAATPERE RNFLLDALKQKNPENWPAIKRSLERAFRDYQDYGYCLSLGEWHKEVNSVAVPLVSSKHGL YVFNCGAPSFHLNPEKLEGEIGPRLIHMVHNIQDALNETH >gi|333032469|gb|GL891957.1| GENE 40 38333 - 39538 1671 401 aa, chain - ## HITS:1 COG:PA3589 KEGG:ns NR:ns ## COG: PA3589 COG0183 # Protein_GI_number: 15598785 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Pseudomonas aeruginosa # 1 398 1 398 401 489 66.0 1e-138 MLNAYIYDGLRSPFGRHAGELASIRPDDLAATVIQKLLEKTGVPGADIEDVILGDTNQAG EDSRNVARNALLLAGLPVTVPGQTVNRLCASGLGAVIDSARAITCGEGELYIAGGVESMS RAPFVMGKAESAYSRDAKIYDTTIGSRFPNKKIIAQYGGHSMPETGDNVAAEFGISREQA DLFAAQSQAKYQKAKEEGFFADEITPIEVFQGKKLPPKFVSEDEHPRPSSTVEALTKLKP LFEGGVVTAGNASGINDGAAALLIGSEAAGQKYGLKPMAKILSAAAAGIEPRIMGAGPIE AIKKAVARAGLTLDDMDIIEINEAFASQVLSCLKGLNVDFNDPRVNPNGGAIAVGHPLGA SGARLALTVARELIRRKKKYAVVSLCIGVGQGLAMVIENVS >gi|333032469|gb|GL891957.1| GENE 41 39553 - 41076 1685 507 aa, chain - ## HITS:1 COG:PA1628 KEGG:ns NR:ns ## COG: PA1628 COG1250 # Protein_GI_number: 15596825 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Pseudomonas aeruginosa # 4 501 3 500 509 545 55.0 1e-155 MTYDIKSMAVIGVGVMGSGIAQIAAQSGHTTYLYDAKAGAAEQAKEKLAATFQKLVDKNK ITSEQAAAANNHLIIAHQIEDLKNCDLIVEAIVERLDIKQSLMQQLEDIVSDNTILASNT SSLSITAIAANCKKPERVVGYHFFNPVPLMKVVEVIRGLKTDPLIIDALNDLSRAFGHRP VVAKDTPGFIINHAGRAYGTEALKILNENACDISEIDRILRDGVGFRMGPFELLDLTGLD VSHPVMESIYHQYYEEARYKPNPLTKQMLDAKQLGRKVNQGFYNYETGSKTGEQPAKFVE RLAKYPKVWVAADFLDDKKQLEDYLTQQNITLDTNSEPQTDSLCLLACYGEDTTQAATRL GINPEQAVAIDMLYGIAKHRTLMPSLVTKPEYRQAAHSIFNLDGNMVSMIAESIGFVAQR VLAMVINLGCDIAQQNIATVDDINAAVRLGLGYPFGPIEWGDQVGSEKILLILNRITALT HDPRYRPSPWLQRRVALHLPLTFTHES >gi|333032469|gb|GL891957.1| GENE 42 41138 - 41899 705 253 aa, chain - ## HITS:1 COG:mlr9033 KEGG:ns NR:ns ## COG: mlr9033 COG1028 # Protein_GI_number: 13488194 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Mesorhizobium loti # 3 252 7 257 258 207 40.0 2e-53 MARKVLISAGGSGIGRCIAEVFLNNQDEVFVCDINAKSLEQFQQDYPKLHIYTCDLADHE QIKLMFSQAIQKLGGIDILVNNTGISGPTVAADELSFEDWNTVINLNLNSTFLITQLAIP YLKQAQAGVIINMSSIAGRLGYPYRLAYSTSKWGLIGFTKTLSMELGADNIRVNAILPGA VDGDRVQRVLQARADVAQTSLEEVTQNALKNQSLKYFVNPKHIADLCLFLASDSGRSISG QILPIDGDKQCLS >gi|333032469|gb|GL891957.1| GENE 43 41929 - 42717 991 262 aa, chain - ## HITS:1 COG:PA1629 KEGG:ns NR:ns ## COG: PA1629 COG1024 # Protein_GI_number: 15596826 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Pseudomonas aeruginosa # 10 262 9 261 261 309 58.0 3e-84 MSVSTGNNFVEVDFSIQKIAVVKINRPEAKNALNGEVRKQLAQAFTELSFNDEINAVVLT GGEEVFAAGADLKEMATATSTEMLLRHTERYWNAIAQCPKPVIAAVNGYALGGGCELAMH ADIIIAGKGATFGQPEIKVGLMPGAGGTQRLFRAVGKFHAMRMIMTGAMVKAEEAYLIGL VSQVTEDDQTIPTAIQMAQSLAKMPPIALQQIKEVALMSEDVPLNAGLTLERKAFQLLFS TEDKNEGVQAFIEKRKPSYQGK >gi|333032469|gb|GL891957.1| GENE 44 43029 - 44183 1320 384 aa, chain + ## HITS:1 COG:PA1631 KEGG:ns NR:ns ## COG: PA1631 COG1960 # Protein_GI_number: 15596828 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 382 1 382 384 596 75.0 1e-170 MIRDEGMLEQLLSTIRDFVKNELIPRENEVVEKDKIPDDIVQQMRELGLFGLTIPEEYGG LDITMEEEVRVAFELGQTSPAFRSLIGTNNGIGSSAILIDGTEEQKQKYLPRYASGEIIG SFCLTEPESGSDAASLKTSAVKDGDFYVLNGTKRFITNAPHAATFTVMARTNPEIKGSGG ISAFLVEANTPGITLGKIDQKMGQKGSHTCDVIFENCRVPASALIGGVEGVGFKTAMKVL DKGRLHIGAYSVGVAERMLNDALHYAIERKQFGQPIANFQLIQAMLADSKAEIYAAKCMV LDAARRRDNGENISTEASCAKMFATEMCGRVADRCVQIHGGAGYISEYAIERFYRDVRLF RLYEGTTQVQQLIIAKNMIREATA >gi|333032469|gb|GL891957.1| GENE 45 44242 - 45525 1255 427 aa, chain + ## HITS:1 COG:PA1019 KEGG:ns NR:ns ## COG: PA1019 COG0477 # Protein_GI_number: 15596216 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Pseudomonas aeruginosa # 10 425 6 423 451 399 49.0 1e-111 MTTKTVTENMSSTEAIQTPKKIWITAFIFAFFTLLCDGADLGFLALSLTSLKAEFHLTGV QAGTLGSLTLFGSAVGGLIGGWACDRFGRVRIIVFFIAFSSILTCALGFTHSYMQFAVLR TIGAMGLGALYIACNILMSEMVPTKHRSTVLATLMTGYTLGSLLATLLAGHIIPEHGWRF LYWIAITPVVLSVLMHFCVPEPESWKKARQLKALEVAQSNQPKKRQNPYLEILRDKKHGT MFILWIISTGALQFGYYGVSNWLPAYLESDLGIKFKEMAMYMVGTFLIMMFAKVIAGIVA DKLGRRAVFAFGTIGTALFIPVIVYLNTPTNILWMMLFFGFLYGIPYAINATYMTESFPT SIRGSAVGGAYNIGKVLSIFSPLTIGYLSQNGSIGLGLLVMAAAYFICGVIPLLFIKDRL FNPQKAE >gi|333032469|gb|GL891957.1| GENE 46 45573 - 46241 717 222 aa, chain + ## HITS:1 COG:RSc2254 KEGG:ns NR:ns ## COG: RSc2254 COG1788 # Protein_GI_number: 17546973 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit # Organism: Ralstonia solanacearum # 1 220 1 220 229 279 65.0 2e-75 MINKITSDIEPILKAIPDGATIMTGGFGVTGQPAELIEALIDLGKKELTIVNNNAASGDR GLTNLIIAGCVKKMICSFPKSAGSTVFQDLYRAGKIELELVPQGNLACRIQAAGAGLGAI FTPTGYGTKVAEGKETRTINGKNYVLEYPLEADFALIYADKADRWGNLTYRKAARNFGPI MAKAAKTTIVQVNDTVELGTLDPECIITPGIFVQHVVKVGDI >gi|333032469|gb|GL891957.1| GENE 47 46241 - 46894 781 217 aa, chain + ## HITS:1 COG:RSc2253 KEGG:ns NR:ns ## COG: RSc2253 COG2057 # Protein_GI_number: 17546972 # Func_class: I Lipid transport and metabolism # Function: Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit # Organism: Ralstonia solanacearum # 3 211 9 217 220 262 59.0 3e-70 MSVQKRSREDIAKLIANDIPEGSYVNLGIGLPTNVAKFLPKDKEIFLHSENGVLAFGPPP QPGEEDQDLVNAGKELVTLLDGGCFMHHGDSFDIMRGGHLDICVIGAFQVAVNGDLANWH TGKADDVPAVGGAMDLAVGAKTIYVYMEHVTKKGEPKIVKELSYPITGEQCVNRIYTDLC IIELKDQKAYVKEMVDGLTFDELQAVTDCELIDARVA >gi|333032469|gb|GL891957.1| GENE 48 46931 - 48247 1067 438 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01399 NR:ns ## KEGG: ACICU_01399 # Name: not_defined # Def: putative porin precurseur in catabolism of dicarboxylic acids # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 438 1 438 438 808 100.0 0 MKKLILAAACAAASGTIFANSSDTTEQRINLLETELQKLKAELAAQKQTQNNLQVKQVKI EENIEKTKATVTEKPVAPSWVTWTDNVKVYGIARIDAAVDFKSSPDSGGRTTSSLYRTPF ESEKRSNHARSDAMINASRLGVYFNSPNKAVTGNIEADFFDSSNMGTGDGKFRIRHAFFT YKDWTFGQTWSLMSNMETRTEAVDYTQFVGTSYTRTPQIRYDWKIDANNDLKVALEYTGS RVSAFPTLTGRYTFKQGPLTALAQGFINEKSTDVATATVKKVSWGAGGGLKYQLTPQQSV QANYQYIVGDQKFMPYTTQSGLANSTSLNAAGDFSLNEDKTDLVMNKLNSINIGYSYKFN EQWRANLSASMFDYDDDTAYAKLNPDANKRLTDYAANVFYSPIEQMDIGMEYHQGKREVF DGRTADVSRVNFVSMYKF >gi|333032469|gb|GL891957.1| GENE 49 48266 - 49483 1195 405 aa, chain + ## HITS:1 COG:YPO3263 KEGG:ns NR:ns ## COG: YPO3263 COG0477 # Protein_GI_number: 16123420 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Yersinia pestis # 13 386 9 382 399 240 39.0 4e-63 MEKIVEPNAENILSKSFIFIMAMTCGICAGSNYYNQPLIYSIAEALKVNADQVALTIVIS QLSYAVGLFILVPLGDFFEKRSYICLLMCCTGFAQVGLSLSQTLPALYGFTFLATFFSIA TQVLVPFAAGLASPKKSPQVVGTLMSGLFLGILLARSIAGLLSTVWSWHAVYLISGIVIL VFAWVMWVKLPVARKSHQLNILQIYGSLFSLAVHQPHLLRRGLAGGIGFGILALIFTTMT FILANEPYHFNDFQIGLFGIVGLAGVFATPWAGKKIAAGLENKIAVICMGLLMSAWIPLF FAQQSLVAYAVGVIMAYFGLSAFHVLNQNLVYRISAEARSRINSIYMTLYFGGAALGSFI AVYAWKHWGWEACAILGLGLAMLSFLIDRLDFYEMNKIAKQEKAP >gi|333032469|gb|GL891957.1| GENE 50 49504 - 49938 511 144 aa, chain - ## HITS:1 COG:DRA0017 KEGG:ns NR:ns ## COG: DRA0017 COG2050 # Protein_GI_number: 15807689 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Uncharacterized protein, possibly involved in aromatic compounds catabolism # Organism: Deinococcus radiodurans # 7 143 24 164 168 90 36.0 7e-19 MESPKYTGLEFLTALKNGEVSPSPMAHTIPMELIEVSEGKATYKVTPRKEHRNIQGGVHG GFCATALDTATGSAAHTLLEHGVGYGTIDLNVKMIRPMQVDTSYYATAELINAGRNIIST QGKIVDENGKVYAFASATLMIIRK >gi|333032469|gb|GL891957.1| GENE 51 50258 - 52060 1475 600 aa, chain + ## HITS:1 COG:PA0506 KEGG:ns NR:ns ## COG: PA0506 COG1960 # Protein_GI_number: 15595703 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 1 600 1 599 601 761 60.0 0 MPLYKAPLRDMQFVLHEMLQTEQNYQGLRKYQESVNRELIDQYLEAAADFCENELAPINQ NGDQEGCHLNQGVVTTPKGFKEAYQKYAELGFTSLTADPEYGGQGLPTLLRIAISEMLCG SNWAWAMYPGLSHGAMRTIEHHGTEQQKQKFLTKLISGAWTGTMCLTESHAGSDLGLIRT KAEPNPDGSYSITGEKIFISAGEHDLSENIIHIVLARLPQAPAGTKGISLFIVPKFNVSD DGQVLDRNKVVCSAIEHKMGIHGNATCVLNFDGAKGYLIGPENRGLNCMFTFMNTARIGT AVQGLAASEISFQGALSYAKERLAMRSLSGPKYPDKNADPIIVHPAVRSMLMTQKAFSEG GRALAYFLAQHVDIVESSNDQEQQKHSDELLAFLTPIAKAFLTESGNESAKHGVQVFGGH GFIVEHGMEQIVRDARISTLYEGTTEIQSLDLLARKVLKSEGKLLKNMTDLIDQFISQHQ SNEVLKPYLEKLAELKQQWLSLTKSIAEKAKHNPEEIGAASVDYLYFSSYVVFAYLWARM AQVAHEKLESGTQEEDFYKAKLTTAKFFYQKLLHRTQSHAASIESGAESVMELDQDAFAF >gi|333032469|gb|GL891957.1| GENE 52 52257 - 53060 959 267 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01404 NR:ns ## KEGG: ACICU_01404 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 267 1 267 267 554 100.0 1e-156 MNAYYQLLNRTIGPQGEVIAHYCSTVHAQGAWNPHEQHMAPASGVIAVELEQFSPRQDMR IGRISFDIFGLIAFGEFTIKTHVIRAGKTIELIEAELQAQGKTCIVARAWRMCTQDSSEI AGLEDQPIHHPDTFTEWSGMKRWPGGFIQTLVTKTNDQHRAGKGIVWLNNDKEMVEGQPT TDFAHLVGMVDAANGIVPRQEGEFTWGFPNLDLQIHMHRYPQGKWLGLETVQQYGSDGIG LTSAVLHDVYGPFGRSEQILTLRKMTK >gi|333032469|gb|GL891957.1| GENE 53 53122 - 56604 4063 1160 aa, chain - ## HITS:1 COG:RSc3122_1 KEGG:ns NR:ns ## COG: RSc3122_1 COG4231 # Protein_GI_number: 17547841 # Func_class: C Energy production and conversion # Function: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits # Organism: Ralstonia solanacearum # 13 715 12 717 762 868 58.0 0 MNIATKVTPNIIATKDVSLEDKYVSDNGTAFMTGIQALVRLPLAQTRRDAINGYHTAGFI SGYRGSPIGNYDNFLWQVEGLLKSHNVVFQPGVNEDLAATAIWGTQQANLSGQGKYDGVS SWWYGKGPGVDRSGDVLRHANLAGTSERGGVVALFGDDHSCKSSTVPHQSEHVMIGCGIP IFYPTSVQQILDFGVHAIAVSRFSGLWTSMKLVSEIVETSASVHVDLDRVTPVIPEDVNF PEGGVNIRWPDHGIQQEERLYKYRLPAVLAYARANKINTVTWPCENARIGIAASGKGYLD TIEALRILGIEDETAQQLGLRVYQVGLIWPLEPQGIREFAKGLEELIVIEEKRPILETQI KDELYSLPDDQRPRVIGKATDGKGEWSTSIEEAPLIGHYEYQPEPIAKMLAARFLKLDIP ESLKLQIQGRIDLLLKAEQESKRVIDLAERKPYFCSGCPHNSSTVVPEGSRALGGIGCHY IAVSLDRGTETFSQMGGEGVSWVGASPFTNEKHIFANLGDGTYFHSGYLAIRQSIAAKTN ITYKILYNDAVAMTGGQHVDGHLSVAQLTRQLDAEGIKKQVIVTDEIKLLNEEDGIAPGV EIRHRNELDAVQRELREISGVTALIYVQTCASEKRRRRKRDAYPDPAERLFINTDICEGC GDCSKKSNCLSIEPVETALGTKRQINQSSCNKDFTCAEGFCPSFVTVHTRDMKRPAKFEG ISAGWPTSPIIPQLYDVPSRIMVGGIGGTGVVTIGALLGMAAHLEGKATRVMDMAGLAQK GGTVYSYVQLAASDEQISSTKIPAGQCELLIGADAVVAGSGAALSRLKEDALVIVNEDST PTSEFIKSRDWYAPITDLIDRLRGRVRQGQLVSLPAARIATLLLGDSIYTNQLLLGMAWQ SGRIPLLRESIEKAIRLNGTAVEKNIEAFRVGCHLASDPTLAARLLAAMPKTKTPQTLAE LVEDRSARLTDYWNEAYAAKYRTLVELAAKKLPEELTGTIATQLYRVMAYKDEYEVARLL TGKSFKESIETQFGKGLRLTYHLAPPALLGGLKNVRKRAFGYWMRFPMMMLARLQWLRET FLDPFARQEERQHEQAWRDRYIAFVEALVEAPDNHNLAVAEQIAKLPAEVRGYGHIKMKA MDAAKQRWDELTPTLLKVRN >gi|333032469|gb|GL891957.1| GENE 54 56809 - 57750 689 313 aa, chain + ## HITS:1 COG:PA0159 KEGG:ns NR:ns ## COG: PA0159 COG0583 # Protein_GI_number: 15595357 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 10 309 4 302 312 243 42.0 2e-64 MRKNLDGGLLHAMHAFLKVIDSGSFTAAAEQMDLTTAQVSRLISELETRLGTKLIQRSTR QQALTDIGATYAERCRQVISMVDEAEAEVTGTASKPKGRLRVLSMGSFGHHYVFPVMAEF CKHYPELTVEYTTSQYVPDLLAKGVDVSLYLTESLTDSRFVARRIGTIFSVLCASPAYLE KHGVPKSPEDLKNHACLRLVNPSITPDWHLLNANGESYQIDIGGQLIADNPELLLDVVQQ DMGVALLPMFSALDAVQNGRLCHILPEWRSPDIGVYTLLPSRHFIDAKTRAWLDWVEEYI SPKIEMDASYFYK >gi|333032469|gb|GL891957.1| GENE 55 58002 - 58904 598 300 aa, chain - ## HITS:1 COG:PA2011 KEGG:ns NR:ns ## COG: PA2011 COG0119 # Protein_GI_number: 15597207 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Pseudomonas aeruginosa # 5 288 7 290 300 330 54.0 2e-90 MSEFVKIVEVGPRDGLQNEKQALTVEQRLNFINDLISAGLKSIEVGSCVSAKWVPQMAQS DELFKLLPQTTDVQFSLLTPNIKGFETAQAVGCKEVAVFTAASESFTRKNINCSIDESFE KFSDVMNAAKAHNIRVRGYVSCIVDCPYEGAIAPEQVVKVVKRLYDMGCYEVSLGETIGT ATPDRVQKVWQACLAELDSKVLAGHFHNTYGMAIANIYQSLQQGIRVFDSSLAGLGGCPY AKGASGNVSTEDLFYLLSHMGFETGINLEKLMQASQNISNVLNRKSLSNYANAYWQTKCA >gi|333032469|gb|GL891957.1| GENE 56 58901 - 60892 2108 663 aa, chain - ## HITS:1 COG:RSc0265 KEGG:ns NR:ns ## COG: RSc0265 COG4770 # Protein_GI_number: 17544984 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Ralstonia solanacearum # 1 658 38 711 712 659 54.0 0 MFEKILIANRGEIACRVIRTAKKLGIRTVAVYSDADANAQHVKLADEAVYIGQSPATQSY LQVDRIIQAAIDTGSQAVHPGYGFLSENDQFALACQQHNICFIGPPVDAILAMGLKATSK ALMEKAGVPLTPGYHGTNQDADFLKQQADRIGYPVLIKASAGGGGKGMSLVERSEDFLHA LASCKREAKSSFGNDDVLIERYVIQPRHIEVQVFGDTHGNYVHLFERDCSVQRRHQKVLE EAPAPQMPSEKLDAMRQAAIDAARAVNYVGAGTVEFIVEQDGTAYFMEMNTRLQVEHPVT EMITGEDLVEWQLRVAYGEPLPKLQNELKIHGHALEARIYAEEPEKGFLPAIGKIDYLHY PTQNQYVRVDSGIVEGDEITTYYDPMIAKLIVWGKNREAALIQMQNALSQFHVDGLGNNI AFLEKIVRSESFKQAKLDTNLIQREQNFLFSPEEIKPELVVAAAFIEFLSKLNNNSSSQK QLWQAQPLWRLNIAYQHSIKLNYLNQNIQIKFASNEDGFTAEYNGQSYPISGQLLDAHTA SVQIGEAQQKLPFNQSQQGLTLFQNGQSYKFAYIRQDFNQADSQADEGHLKAPMPGVVTQ VLVSANHSVKKDDILMTLEAMKMEYTIRAPKDGVIVDSYFQVGDQVKAGDELVEFQPAQE EVA >gi|333032469|gb|GL891957.1| GENE 57 60904 - 61707 988 267 aa, chain - ## HITS:1 COG:RSc0267 KEGG:ns NR:ns ## COG: RSc0267 COG1024 # Protein_GI_number: 17544986 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 2 260 3 261 264 246 48.0 3e-65 MSYQFLQLEQQGQVAYVWLNRPELHNAFNTTVIEELHACFKQINTRDDIRVVVLAGRGKS FSAGADLNWMKQAGQASSAENEADALKLAQMLDALATLKQPTIARVHGIAFGGGMGLASA CDICISSTDAKFATSEVRLGLAPSTISPYVIRAIGARQASRYFLTAERISAREAKQIGLA HEVADAEDLDKKVQEIVDALLLGGPHAQAASKQLIQMVSNQTMSNDLLQQTAHHIAQVRQ GSEAKEGLSAFLNKQQPAWVSNSNNNN >gi|333032469|gb|GL891957.1| GENE 58 61717 - 63318 1853 533 aa, chain - ## HITS:1 COG:RSc0269 KEGG:ns NR:ns ## COG: RSc0269 COG4799 # Protein_GI_number: 17544988 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Ralstonia solanacearum # 1 533 1 535 535 829 74.0 0 MNQLQSKINVRSEDFKTNQQAMQTLVTDLKQVAQRIALGGGENARQKHLARGKLLPRERI DQLIDVGTAFLEIGQLAAYNVYEDDVPAAGVIAGIGQVNGITCMIVANDATVKGGTYYPL TVKKHLRAQEIAEQNHLPCIYLVDSGGAYLPMQDEVFPDRDHFGRIFYNQARMSSLGIAQ IAVVMGSCTAGGAYVPAMSDETIIVRNQGTIFLGGPPLVKAATGEVVSSEDLGGGDVHTR LSGVADHLAENDEHAIAIARNIVANLNKKPNELNKQIDEPLFDASELYGVVPSDARKPFD VREVIARIVDGSRFDEFKARFGSTLVTGFASLYGMPVGIIANNGILFSESAQKGAHFIEL CTQRNIPLLFIQNITGFMVGRQYENEGIAKHGAKLVMAVATANVPKLTLIIGGSFGAGNY GMCGRAYSPRFLWTWPNSRISVMGGEQAASVLSTLKRDQIEQKGAQWSAQEEDEFKQPIR EQYERQGHPYYASARLWDDGVIDPAQTRQVLGLSLAAAMNAPIQPTKFGVFRM >gi|333032469|gb|GL891957.1| GENE 59 63343 - 64515 1395 390 aa, chain - ## HITS:1 COG:RSc0279 KEGG:ns NR:ns ## COG: RSc0279 COG1960 # Protein_GI_number: 17544998 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Ralstonia solanacearum # 1 389 2 392 393 554 69.0 1e-157 MNLRSLNFGLDETLIALQDSVAAFCAKEIAPIAQQVDQDNKFPAHLWKKFGDMGLLGMTV SEEYGGANMGYLAHIIAMQEISRASAAIGLSYGAHSNLCVNQINRNGNEQQKQKYLPKLI SGEYVGALAMSEPNAGSDVVSMKLRAEQKGDHFVLNGSKMWITNGGDADVLVVYAKTDPQ AGPKGMTAFLIEKGMKGFSHGNHLDKLGMRGSNTYPLFFDNVEVPAENVLGGVGNGVKVL MSGLDYERAVLSAGPLGIMDACLDVVIPYLHQREQFGQALGEFQLMQGKLADMYSTWLAC KALVYAVGAACDKADHDRSLRKDAASAILYAAEKATWMAGEAIQTLGGNGYINEFPAGRL WRDAKLYEIGAGTSEIRRMLIGRELFNETK >gi|333032469|gb|GL891957.1| GENE 60 64660 - 65277 491 205 aa, chain + ## HITS:1 COG:PA3973 KEGG:ns NR:ns ## COG: PA3973 COG1309 # Protein_GI_number: 15599168 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 202 1 206 215 100 28.0 2e-21 MSYKRSSLMQERMEQNRKSILSSARKIISEGGFKDAQIQTIAEQAGVSSGLVYRYFDNKS QVLIEVLSDAINTELLVIESITESDLSAKQKLHKAVATFVKRALNSPQLAYSLMFEPVDS TVEHERFRVKQLIKQSIKKILADGNASGEFILDDLNTAALCVVGAMTYVVVEPLDPAQNT KFDHAHKDYFSKQIADFCVDAVQKK >gi|333032469|gb|GL891957.1| GENE 61 65389 - 67083 1547 564 aa, chain + ## HITS:1 COG:mlr6932 KEGG:ns NR:ns ## COG: mlr6932 COG0318 # Protein_GI_number: 13475770 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Mesorhizobium loti # 7 560 33 586 590 668 54.0 0 MQQERLSYASGPSTQPLLGMTIGEQFDQACQQYAEKEAIVSFHQNRRLTYKALQDEVNAF ACSLLKLGLKKGDRLAIWSPNCVEWTITQFAAFKAGIILVNLNTAYKSHELEYVLNKVSC KGLIIASQFKTTDYQELLTKIAPELTTCTDKVLSSERLPHLKFVIKIDDQQHTGIYRFSD LLTTPTSEQLEQLKQLARQLQFDETINIQFTSGTTGNPKGTMLTHHNILNNGYFVGEGIR LTPQDKVCISVPLFHCFGMVMGNLACVTHGATMVYPSAVFNPLETLKAIHQERCTAAYGV PTMFIATLEHEQFNDFDLSSLRTGIMAGSPCPREIMQRVIDRMHMSEITICYGMTETSPV SVQSSVNDSIDKRVSTVGHVHPHVEIKIVDLEGQIVPQGTLGELCVRGYSVMAGYWGEEE KTREVIDAAGWMHTGDIAEMDQDGFIKIKGRIKDVVIRGGENLFPKEIEDFLYTHPDVSD VQVIGLPDAKYGEELCACIILHEHHQVDEDSIRQFCKEHISHNKVPRYVRFFNEFPMTAS GKAQKFKLQEIMRAELNLTGNVFD >gi|333032469|gb|GL891957.1| GENE 62 67154 - 67825 647 223 aa, chain + ## HITS:1 COG:PA2034 KEGG:ns NR:ns ## COG: PA2034 COG0500 # Protein_GI_number: 15597230 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Pseudomonas aeruginosa # 9 221 7 220 224 119 38.0 5e-27 MAKDFNSPKVVEGYDVHIRKLIPGYEVIHQQVDAILQSVLPPDAHILIVGCGTGYELDYL LKRHPNWQFTAVDPSLTMLQKAQEQVEILGKSTQVTFVHGETSALPLESCFDAALSILVA HFIADDIKPAFFKDIYKRLKEKAPLLTYDLMTCVNPQQLQALHYLCLAQGLTEEQCQKML ERMAEDFFSLTTEGYIKLLEETGFESVQPYTQILTYQGIIAKK >gi|333032469|gb|GL891957.1| GENE 63 68066 - 69352 1227 428 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01415 NR:ns ## KEGG: ACICU_01415 # Name: not_defined # Def: putative DcaP-like protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 428 1 428 428 859 100.0 0 MMKILNTTVQKSLLAVSVTLLMSSAFAGQVNPEIEQLRQEIKELRAMLQINMEAQKSLAQ RRVEQAAPVVTQAPPPIQQTLTKSGAEFNLYGYIRADASYQIKGASSMYNNISGVPLENT PEESAQKDQLHSTVYVTRFGLNFKTPTAVGDVGGKLEMDFFGAATRDQFRIRHAYLTFDK WLIGQTWSTFIAPEYYPETIDAGTFVGSALLRSPLVRYSDNLTANTSFAVSVEDPKYTAA TDPDNKMRLPALVGRLNHKFANGSMLSGRSFVAEKRTNNDSEWAWGVGLGGKYQITPDTL LKADYYHVKGDGRFLLWSNSGYAIDDQNNMHSNEFDTVSLGITHQFTPQIRSTLGYGYMK AKDDNRFAELQRTSTTQNKQLWQGWVNALYNPYKPITLGIEYVYGERETFDNRNGIDNRF NMIASYDF >gi|333032469|gb|GL891957.1| GENE 64 69398 - 70636 912 412 aa, chain - ## HITS:1 COG:PA3125 KEGG:ns NR:ns ## COG: PA3125 COG2755 # Protein_GI_number: 15598321 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Pseudomonas aeruginosa # 10 410 18 424 442 402 46.0 1e-112 MKLYQATLFSFVLITSFAQADVENSQWITTWSASPQKVWNKDFVFPTLIPEQVSNQTIRQ MSKISLGGEAVRLVFTNQYGKQPLYIDETTIGLANAATLKSKSIYPVYFSGQLKARILPG KQLISDPIQLPVPDHTQLVVNSFIQKPTTFKTFHWDAKQTSWLIRGNQTTNLTTPIDAKT TTARLLLSAIEVKPKQKAHVVAVVGDSITDGATATLDANTRWTDFLAKRLSVHRMAVVNN GISGNRLLTDGMGDSVLKRLNSEIFQYSGVKTLIVLVGINDISWPGTAFAPKQQIPSFEA LTQGYRRVVSEAHKHNIQVIGTTLLPFSGALPNTPLDNYYQPNKDQLRQRINHWIRTSHT FDGVLDLDEGLKDPKHPNRLNPIYDSGDHLHPNDRGNQHMAELVDLDQIIKN >gi|333032469|gb|GL891957.1| GENE 65 70748 - 71653 474 301 aa, chain + ## HITS:1 COG:PA3124 KEGG:ns NR:ns ## COG: PA3124 COG0583 # Protein_GI_number: 15598320 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 301 1 301 303 305 49.0 5e-83 MSYFDINRSGELAIFIRVVELGSFSAVARACNMTPSAVSKLISRLEKRLGVRLLNRSTRQ FQLTSEGCQFYEQGIQILNDLDELEQSVTANHIPKGRIRIHTSFSYWIHFLLPCISLFNQ RYPEIELEAHLSDEVINLVEQRIDVAIRTGPLKSSNLVARSLGSTYKQYVCSPLYIEKYG CPEHPDELHEHQLLDVSYQRQNKTWLFKKATQEISLTPSKVLKVNHGEAILQLALAGAGI AQLNEFQIRNALQQKQLVKILEDWNIHASEEFHAVWIGHDKYVPNRVRTFLDFLVEHASI N >gi|333032469|gb|GL891957.1| GENE 66 71655 - 71885 168 76 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2281 NR:ns ## KEGG: ABAYE2281 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 76 21 96 96 148 98.0 7e-35 MGCRPMSKNEFNTRCVWAGHDLSACNCIYNSLEQHYSPQFVESLPKLSLQNIDAKMNFVE TMNQTMQQCQLSASKH >gi|333032469|gb|GL891957.1| GENE 67 72074 - 72220 65 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIILYFLNSFIKPTYIQPLLLKQSFLRVLSHPLFKRTTHYRVRKIFT >gi|333032469|gb|GL891957.1| GENE 68 72219 - 72428 114 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDSLVKRSYAHSLLIIMVAKRKRVSRLVPKKPAHPRVSHSRSSIKGTRGVTPKNVFLVH LGRRSAKTD >gi|333032469|gb|GL891957.1| GENE 69 72915 - 73058 174 47 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01419 NR:ns ## KEGG: ACICU_01419 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 47 1 47 47 72 100.0 5e-12 MVRIFCAVSMVLAIAMGMSACQDRNSRNDGMHEASDPATSHDMNKNS >gi|333032469|gb|GL891957.1| GENE 70 73328 - 73756 337 142 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002108 NR:ns ## KEGG: ABBFA_002108 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 142 1 142 142 244 100.0 9e-64 MPQYLKIAEKIYQNVKEKKGFTDDPMEDLNNLMIELRQEIKGTKLKLLYNYIDFAEILIK PLQESKIKLDLSLIPKSKNTQEFVLWLAGFIERITTGGQEKLPPIRAKITLPAYAYEETY PSQKKPVNNGEEIIEYFKKNQS >gi|333032469|gb|GL891957.1| GENE 71 73844 - 74065 205 73 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01421 NR:ns ## KEGG: ACICU_01421 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 73 1 73 73 133 100.0 2e-30 MFVYFTDGTCINDSEIYGVKAKYEQNKYVVEVTIKPTHVLATTPSVQFKKEVFDDPNLAN QYLSHNFNMPPFF >gi|333032469|gb|GL891957.1| GENE 72 74150 - 74467 562 105 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01422 NR:ns ## KEGG: ACICU_01422 # Name: not_defined # Def: putative 17 kDa surface antigen # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 105 1 105 105 162 100.0 5e-39 MTDQNTDHAQLVAGDHNYSDSRWRESYLTRPYYQEAQLTTPDLDYDRDFSAAYELGHRAR SESKEGTQFEDMEGSLQQKWEELKAESRLKWEHAKQAIKDAWDDI >gi|333032469|gb|GL891957.1| GENE 73 74573 - 74794 273 73 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSTTNNQANQRNNQQQQQQQNDNRNQQQHGNQQQNDQQQQNNQQQQQNDNRGQQQGSNQK DSGQQNSNNNQQR >gi|333032469|gb|GL891957.1| GENE 74 75079 - 75558 381 159 aa, chain - ## HITS:1 COG:TM0703_2 KEGG:ns NR:ns ## COG: TM0703_2 COG1546 # Protein_GI_number: 15643466 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Thermotoga maritima # 8 145 29 172 178 64 32.0 8e-11 MFNKCCELLAKEKIKIAFFESASAGYLAYRFSLSPYSGDILIGSLVSYDLRVKENTLHIS EELIEKYTAESMQVTVEMINKGKELLHADLYVACTGLLKKGGSETPEKPVGTFFYSIYYK NNFYNFRRVLRGPAFLKLRKLIYYVTQDIKLIILEDKRR >gi|333032469|gb|GL891957.1| GENE 75 75874 - 77283 861 469 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01425 NR:ns ## KEGG: ACICU_01425 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 469 1 469 469 946 100.0 0 MPVVVKKRLLDLLQDNQQNYYELFVFFLDPDVSSFEKEKKARDFLVKEIDKLEMKEIDFP SDINLIKAWCENDNKKNCQEFQAYLNRRQSGQDREYFKNVAQAFEFLIKVSPTKKVDGAW LYSSVHYWNDPIFHELIITYLEELGLGEPKANHVCIYDDLLRSLGLDSFDLLLEDEYYHQ AVVQLALGYAPPEFIPEIVGFNLGYEQLPLHLLISNYELAELGIDSKYFNLHITIDNIDN GHAYKAIKVIEDIYNQYRDKELFLTKLKRGFALNNHGVSSSNIIKNLNTEDFVHRIFKRK ALVGQLIHNETRQFGCKTINQWLSNPDDIAGLITHLTEHKWIKFNTDPEQSVFWRMINEE NGKMFGVFNPVERQIIHDWIAGSDHSSSFLAYSRELKNSQRIQDYLFSYISDGELDALQE RVQQSSDLAIKICKLTPFLAPDSHHKSIGLWSTRKYVELLFPYLGTFKN >gi|333032469|gb|GL891957.1| GENE 76 77344 - 79482 2288 712 aa, chain + ## HITS:1 COG:PA2147 KEGG:ns NR:ns ## COG: PA2147 COG0753 # Protein_GI_number: 15597343 # Func_class: P Inorganic ion transport and metabolism # Function: Catalase # Organism: Pseudomonas aeruginosa # 6 712 4 709 709 866 60.0 0 MNDNTKSTNKTSEMAGADAANKANTTQKTEQLDTVRDDATNEALTTNQGVKIADNQNSLR AGIRGSTLLEDFILREKITHFDHERIPERIVHARGVGAHGYFQAYEGNERLTKAGFLTDP TIQTPIFVRFSTVQGPRGSADTVRDIRGFAIKFYTQEGNFDLVGNNAPVFFVQDGIKFPD FVHAVKPEPDTEIPTGATAHDTFWDFVSLVPESAHAVIWAMSDRAIPRNLRSIQGFGVHT FRLINAEGKSHFVKFHWTPKQGLSALVWDEAQKLAGKDPDFHRRDLYEAIEHGFYPEWEL GVQIVEEEDEMNFDFDLLDPTKIIPEELVPVTPIGRFVLNRNVDNFFAETEQVAFCPGHV VPGIDFTDDPLLQARLFSYTDTQLSRLGGPNFHQIPINKPVCPFHNNQRDGIHQHTIHKG QAAYQPNSIDGNWPVETPPAASNGGFESYPEKISGHKLRQRSETFSDYFSQPRLYYKSLA PHEQKHVVDAYTFELSKVQRKHIRERQVQQILANIDLDLARQVGANLGIEVPDLTLSYKK TAVEKSAKLSFLAFPPEDIQGRKVAVLIHNMVKSDALEAIKNWAIKEGVILHLLAPSLAP VKDHKDNVIVADGMQMSEPSIAYDAVIIPDGDNLNTVMQDGVARHYLLEAYKHLKPIVFL GNKSDLLEPLGLVADEGTLIEDEFQHVAEKFKNLIKAHRVWSREQIAAHVPA >gi|333032469|gb|GL891957.1| GENE 77 79539 - 80417 234 292 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 44 290 1 242 242 94 30 2e-18 MENTTNQYPSEVPAQVQPHQPGDQEKMHPEPEIIKASHKGSEKLKGKVAVISGGDSGIGR SVAVLFAREGADIAVLYLKEDQDAEITKQLIEKEGQQCLLLKGDISDPDLAKQNIDKVLQ HFGKINILVNNAGVQYQQKEIESISNEQLEKTFKTNIFTMFYLTKEAIPYMEEGDSIINT TSITSYQGHDELIDYASTKGAITSFTRSLSNNLMKQKKGIRVNGVAPGPIWTPLIPSSFD AETVEKFGKDTPMGRMGQPSEVAPAYLFLASDDASYITGQVIHVNGGQIVNG >gi|333032469|gb|GL891957.1| GENE 78 80559 - 80969 360 136 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01428 NR:ns ## KEGG: ACICU_01428 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 136 2 137 137 226 100.0 2e-58 MQPTHTHSTLQYIHISVPEILLSNIQIKNSWQDYNQEWSYRLDPPHASHPFQRDLYIIKS KNIETEDIKKILDNIVVKNSKNKDDLKNIVEAETVIKEILDLSNYIPIENWLNDTGNRSI VESMIDKNKVKLLDII >gi|333032469|gb|GL891957.1| GENE 79 81457 - 82131 755 224 aa, chain + ## HITS:1 COG:no KEGG:ABBFA_002099 NR:ns ## KEGG: ABBFA_002099 # Name: not_defined # Def: hypothetical gene 48 protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 95 1 95 411 142 100.0 9e-33 MANTRYEDDNNSSGTSNRGFASMDPERVREIASKGGRAAHASGNAHEFTSEEAREAGRAA HASGNAHEFTSEEAREAGALSHKNDDRNGRGRSRYDDDPPPLVVAAVMMTTKMMTEAVQV VEAVAAVVMMMTTKMMIAVAQAVVAVVAVVMMTTKMMIAAPPPRGRSRYDDDDEDDDRGR SGGRGRGRSRRDDDDDDDDRRGRSDGRGQNSRNQKRDAYGRFTS >gi|333032469|gb|GL891957.1| GENE 80 82192 - 82428 352 78 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002098 NR:ns ## KEGG: ABBFA_002098 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 78 1 78 78 160 100.0 2e-38 MKNQRDAVLGYADEQHAYYIRLIENDAVLGESYGIFCENPESEAAESIMTTLFLKKSFWL NGSEFTDIVKGLHPLTHS >gi|333032469|gb|GL891957.1| GENE 81 82711 - 83322 497 203 aa, chain + ## HITS:1 COG:ECs1678 KEGG:ns NR:ns ## COG: ECs1678 COG1974 # Protein_GI_number: 15830932 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 70 203 11 139 139 106 45.0 4e-23 MPKKKEFEHGGARENAGRKAQFNEPTKVIRVPESQVNFIKNWLLNNVKTNNQTDFTSKLK IQQVHPNNDKIYHIPLATERVAAGFPSPAQDDIEQALDLNEYLIRNENATFIVKANSLSM LDAGIDIDDPLIVDRSIPAKSGDIVIALIDNDFTVKRLMIDTQFHPPKVWLKAENPDYQN IYIEEGQELVIWGVVTYNLKRMR >gi|333032469|gb|GL891957.1| GENE 82 83393 - 84004 491 203 aa, chain - ## HITS:1 COG:VCA0355 KEGG:ns NR:ns ## COG: VCA0355 COG1280 # Protein_GI_number: 15601120 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Vibrio cholerae # 1 166 1 172 208 69 34.0 4e-12 MAFNIFIAFWSVSILFIITPGADWAYAISAGIKGKVVVPAVAGMLFGHFITILLVAAGVG LLVANNPTALMILTVAGSAYLLWMGINLLLTPPTPNESGSEKAQSWLRWATKGVYVSGLN PKVFLLFLALLPQFIDTTASWSVTTQILAFGVVHIISCAIIYLMVGYGSEAILKTRPQAA QLVGRFSGGLMVVIATCLLIGQI >gi|333032469|gb|GL891957.1| GENE 83 84161 - 84616 607 151 aa, chain + ## HITS:1 COG:PA4508 KEGG:ns NR:ns ## COG: PA4508 COG1522 # Protein_GI_number: 15599704 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 151 3 153 157 116 41.0 2e-26 MDRTDKKILAELQLNGRLSITELAEKVGLSISPCHRRVKALEESGAIKGYRAELDPNLVG FEFSAIVFITLKEGDKQAVEKFENAVIEIPQIIQAQRLFGEPDYLLHVVARDLPAFQRLY DEKLSAIPSVQRLISTIVMKDVVPERLFPIG >gi|333032469|gb|GL891957.1| GENE 84 84675 - 86291 1545 538 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01434 NR:ns ## KEGG: ACICU_01434 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 538 1 538 538 1010 100.0 0 MSVSEHPNLDTVQGADSQKAVNETLEDYTLRYAPHSFRRWSPKVVAITALGGIAYLADFS IGASIGMSYGTTNAVFSILFAAIIIFLTGIPLAYYAARYNIDLDLITRGAGFGYIGSVLT SIIFASFTFIFFALEGSIMAQGLLLGLGIPLWAGYLISTVMVIPLVIYGMKALSKLQVWT TPLWLVLMIGPVAYLIYQEPTLVSQFATFTGHEGFAPVDMAAIMLGAGICLSLIMQIGEQ IDYLRFMPAKTKENSKAWWAAVISAGPGWVILGAIKQIIGAFLGFYLLTKIPGVNSTEPV QQFNAAFHDMLPGWAALTLAVILVVISQIKINVTNAYSGSLAWTSAYTRISKHYPGRIVF VIVNLAIALALMEGNMFAVLGKILGFYSNFAIAWVVVVATDISINKYVLKLSPKEPEYRR DMLYNVNPVGMVAFLVSAGLSIAAFFGLLGSFLAPYSPIIALVLAFVLTPIMGLLTKGKY YIKSHDDGVKEPRYDAEGTPVATVYHCRVCEQGYERPDIMFSHKHNGTICSLCKTLDA >gi|333032469|gb|GL891957.1| GENE 85 86487 - 89951 2890 1154 aa, chain + ## HITS:1 COG:AGc4388_2 KEGG:ns NR:ns ## COG: AGc4388_2 COG0642 # Protein_GI_number: 15889688 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 683 929 1 246 246 244 46.0 9e-64 MSVMPDTSRPQQAPQRVIKTRREYNIWVADESIEDYALRYAPTSVRKWSPWTVTNTAIST VSFLAMEAIGATMLWQYGFSNALWAAIVVCTIIFLTSWPISYYAAKYNVDVDLLTRGAGF GYIGSTITSLIYASFTFILLAFEAAIMAMALELALGIPQVIGYLISALVILPLVVKGIGF INKVQAVTQPIWLLLLLLPWFFVLWKQPQILSSSLHFVGAVSNSTDFNLYYFGAACTLIF SFVIQIGEQADYLRFLPQKEKNRTAWRFAVFLGGPSWIIFGFLKVLMGMLLMVLAFQLFI PVSELDNPTYLYWVAYQQFIPNPQLALILTLALVCLAQIKINMTNAYAGSLAWSNFFARL THSHPGRIVWLLFNVFIAIVLMEMGISHAVERILGLYSNIALAWIGAVVADLIICKPLGL SPKGIEFRRAYLYDINPVGVGALLIASVLSMLSYLGFFGLMAKGLASFIALGSAVLCVPV IAYLTTGKYYIARQPEKIQATLVANCVVCERDYELADMAGCPAYNGTICSLCCSLEARCH DLCKPDARWSVQLKKAIWHYLPERWASRLNSRVSLYLLLTLGLSIVLAVSLSLVYIQEKT YLETINAAAVPQLFTLFVKIYTILFLLMSVAAWWLVLNDESRRNAEIETHQQTALLIDEI AAHEVTSKDLQDARIAAERANDAKSRYVIGISHELRTPLNSILGYSQLLQKQEQLSEQGK MALGVISRSGQHLTSLIDGLLDLARIETGKISLNVVDVHFPNFIEQIIQMFQPQFEQKNL QFVYEIGENLPHYVRTDKKRLEQVLINLLGNALKFTTSGTITLKVEYRFQTAYFEIRDTG CGIAEADLERIFNPFERGSNVVQGGFTGIGLGLPIVKLLVDLLGGQLSVTSQLNQGSQFK IKFYLPSKEVVHPISNVYSNQITGYQGERKRILVVDNEAVDRGLVANFLKPLGFMIEEAE SGIDCLRRVPIFQPNLILMDLNMPLMGGWETARLLRQNNITNVPILIISANAGEREVNPQ DAVLSEDFMLKPIDLNLLLSKIGDKLGLVWIDSKSETLLENNEVQALDLNIYKQEQVAVH TLIQQPENNELLDFPQSLQQLNDLIGQGYIRGIQQTLTQCRQNFPKHNELWEQLEQAIQK FDLKHAQRLIQDKQ >gi|333032469|gb|GL891957.1| GENE 86 89948 - 90907 902 319 aa, chain + ## HITS:1 COG:SMb20610 KEGG:ns NR:ns ## COG: SMb20610 COG0745 # Protein_GI_number: 16265270 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Sinorhizobium meliloti # 12 307 6 298 309 231 41.0 1e-60 MSTQHVSFQQASPNEQAVILIVDDVPENLGLLHESLDQAGYRVLVTTDGLSAIEIAHRCL PDMILLDGNMPHMDGFESCIQLKASPITQFIPVIFMTGLSETEHIVRGFQVGGVDYVTKP LNIEEVLARVKTHLAHAKLLQQQKQVIDATETAILALDVHGKIVWKTQKASDLLNQYLPE LEGFEAGLKAWFSDLEHEKDPKKLTSCSYSTPSQQLQLLLLTPWETEPSVAKNYLIQIKT STPALEMADILKYCPQLTQREAEVMHWLLLGKTNKDIAEILELSPRTVNKHLEHVFEKLC VENRTAAVAHINSLVQEFH >gi|333032469|gb|GL891957.1| GENE 87 91051 - 91335 433 94 aa, chain + ## HITS:1 COG:yjdJ KEGG:ns NR:ns ## COG: yjdJ COG2388 # Protein_GI_number: 16131953 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Escherichia coli K12 # 11 91 7 88 90 66 40.0 1e-11 MNIQQKDDTKHGSFSLLDGETVAGEMTYTWAGESMLIIDATDVNENYRGQGVGRQLLDAL VAFVREKDVKVIPLCPYAKSVFDKDPSIGDVLRK >gi|333032469|gb|GL891957.1| GENE 88 91623 - 92282 427 219 aa, chain + ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 21 218 1 198 206 185 51.0 6e-47 MNWQYIHSVLPQFFSATLTTLKISIISIILAIIVGLICSILITYHVRVLNRIAQFYIELS RNTPLLIQLFFLYYGLPKLGIKIDGFACGVIGLTFLGGSYMAEAFRAGLQSVAKGQIDSA KSIGLKPTQIFRYVIFPQALAISIPAIGANCLFLIKESSVVSAIAVVELLFVTKDLIGMD YKTTEALFLLIMAYLIILLPVSILTSYLEHRSRKVSHGT >gi|333032469|gb|GL891957.1| GENE 89 92272 - 92937 517 221 aa, chain + ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 6 220 9 223 225 230 59.0 1e-60 MELDYLFQASHLERLMWGLWATAKIAFISVFFSAIFGTVFGVIMTSKNIVVKALCRLYLE AIRIIPILVLLFVFYFGFATWFNWQFSAMWVCIVVFVLWGTAEMGDLVRAAITSIDQHQR DSAYALGLTHVQALIYVIFPQSLKRVTPGAINLFTRMVKTSSLAVLIGVVEVIKVGQQII ENSLLTVPSASLWIYGFIFILYFLICYPLSRLAAHLEKVWE >gi|333032469|gb|GL891957.1| GENE 90 92940 - 93671 551 243 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 239 1 240 245 216 46 4e-55 MPLLSIQQLQKSFAQSHILQGIDLDVEQGEVVVILGPSGCGKSTLLRCINGLEPIQGGEI RLTGSGVLGKDVDWTNARQKIGMVFQNYELFGHMNVIDNILLGPLKVQKRHRDEAEQVAD ELLKRVGLYERKLDYPRQLSGGQKQRIAIVRSLVMQPQVILLDEITAALDPEMVREVLDV VLKLANEGMTMLIVTHEMSFARKVADRIIFMDKGKIIEQASPEEFFEQPKTERAKAFLNI LSY >gi|333032469|gb|GL891957.1| GENE 91 93702 - 94562 886 286 aa, chain + ## HITS:1 COG:jhp1099 KEGG:ns NR:ns ## COG: jhp1099 COG0834 # Protein_GI_number: 15612164 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Helicobacter pylori J99 # 13 278 14 271 277 271 51.0 1e-72 MFKRNSIKILSSLAVAGVLLTACSKTPSTEQASNAQADHSLEQVKKNGVLRVAVFADDPP FGFVDSAGNNQGFDVALAKRVTKDLLGDEKKVEFIVTEASNRVEFLKSNRADVVFATFTV TPERKEVVDFAEPYLKGAFGIVSPKAKPITDIAQLEGKTLIVNKGTSSDTYFTKHYPKVN LLKFERNSDAFKALTDGRGDAISQDSTYALAWAAKNPSYVAGIQSIGDQEFIAPAVKKGN TQLLNWLNTEIKQLRTSGEIKKIYDETLKPIYGDSVNPNVFLDVGQ >gi|333032469|gb|GL891957.1| GENE 92 94645 - 95511 1023 288 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 39 288 26 275 279 307 60.0 2e-83 MTTLTFQNVKHILAASLLSLGLVACDKGTQSTEKTADTTQTVSSIEQIKKNGVVRIGVFS DKPPFGYLDAQGKNQGFDVEIAKHVAKDLLGDENKVEFVLTEAANRVEYLKANKVDIIFA NFTVTPERKEVVDFAKPYLKVALGVVSPKSHPITDVAQLKDKTLLVNKGTTADSFFTKTH PEIKLQKYEQNTETFDALKDGRGAALAHDNLLVLAWAKENPNYTVGITNLGEQDLIAPAV KKGDKELLDWLNQDLEKLAKEGVIHQAYEKTLKPVYGDTINPKDLLVE >gi|333032469|gb|GL891957.1| GENE 93 95759 - 96694 939 311 aa, chain - ## HITS:1 COG:VCA0889 KEGG:ns NR:ns ## COG: VCA0889 COG0583 # Protein_GI_number: 15601643 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Vibrio cholerae # 9 302 9 302 312 250 41.0 3e-66 MSTNQSPVLLNEMATFVKVVESESFSETARQLGTTPSAVSRAIARLERALGTRLLYRTTR KLRLSESGQQVYQRCLDMVNAAQAVMESSGQFHVEPEGIIRMSVPKAVGHFMIHPHLPEF LERYPKIDIQMLLEDRYVDLIDDGVDLALRITEQPSGGLMGRKLIDIDHLVCATPEYLAK HGTPNHPHDLKQHECIYLGEQASDSKWKFQQGNKSISVAVRGRYAANHTGVRLSAALQHL GIASLPYFVARHALQQGTLVQVLPDWYFKTYYSGGLWLLYPPTRHVPPKLSVLIQYLADK LAAEPTLFKLK >gi|333032469|gb|GL891957.1| GENE 94 96786 - 97424 532 212 aa, chain + ## HITS:1 COG:SMc02484 KEGG:ns NR:ns ## COG: SMc02484 COG1280 # Protein_GI_number: 15966804 # Func_class: E Amino acid transport and metabolism # Function: Putative threonine efflux protein # Organism: Sinorhizobium meliloti # 8 206 7 208 214 130 37.0 3e-30 MWQMYGHEFLTLALIHFMAVILPGPDFVITVRQSVRYGYLIGCLTAIGIGVGISVHVFYT LVGIGFLIQQSEWLMSLIRTAGAAYLVYLGWQCLRSQPNTNIEINGQAGSDTPSLFKAFT MGFLTNALNPKATIFFLAIFTTIVSTTTPMKVQVFYGIWMCMVNAIWFMVVSVLFAQPIV RKRFLEFGVYFERVMGVLLIGIALRLIWSLFV >gi|333032469|gb|GL891957.1| GENE 95 97891 - 99852 1930 653 aa, chain - ## HITS:1 COG:ML0842 KEGG:ns NR:ns ## COG: ML0842 COG0520 # Protein_GI_number: 15827373 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Mycobacterium leprae # 248 646 5 403 411 531 62.0 1e-150 MTTQLTTSNLQGSPTGPEVTGVNPPANFPDESTIARLANEFFSAVPSSSSSTSSSGLNLD LPVGAPPHPPQPGEPFSALSGRAPNIAFQKSLNPEYPEHIPNLPDYPERRIVASAPVVGG ANLPRPPFEPHLPQAAHSEPNVPRIEPSLPTGAGESPYYFLNDFSAPNATEPSVKGVEDN YSVAQSFQLPHGDQLKSLLTEDRFATNTPTQSSASSAFYFLDLPQSGQSYSHYQPSQPTF VVSSAQPLDVHAIRRDFPILQERVNGRPLVWFDNAATTQKPQRVIDRIAYFYQHENSNIH RAAHELAARATDAYEHARNVVARFIGAPSSKEIIFVRGTTEGINLIAKTWGEQNIGEGDE IIVSHLEHHANIVPWYQLTKKTGAKLRVIPVDDTGQIILEELPKLINERTKLLSITQVSN ALGTVTPVAEVIKIAHAKGVRVLVDGAQSVSHIPTDVQALDADFFVFSGHKVFGPTGIGA VYAKPELLESMPVWEGGGNMIQDVTFEQVVYQPAPNKFEAGTGNIADAVGLGAALEYVES LGIHNIARYEHDLLEYGQNALSSVSGLRLIGTAHHKASVMSFTLQGYSTEQVGKALNQHG IAVRSGHHCAQPILRRFGVEQTVRPSLAFYNTTEEIDLLVSVLHQLTRNRRTS >gi|333032469|gb|GL891957.1| GENE 96 99827 - 100759 994 310 aa, chain - ## HITS:1 COG:no KEGG:ABBFA_002081 NR:ns ## KEGG: ABBFA_002081 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AB307-0294 # Pathway: not_defined # 1 310 1 310 310 627 100.0 1e-178 MAKNTDKAQLALGDHAARQLANATKTAPQLSTITPRWLTHLLQWIPVEAGIYRLNRVNNT DDIQVACTQRDEATLPQTFVDYDPEPREYFLNGVSTVLDVHTRVADLYSSPHDQIKEQLR LTIETIKERQESELINNPEYGLLASVTDDQRISTLNGPPTPDDLDDLLRKVWKEPGFFLA HPDAIAAFGRECTRRGVPPPTVSLFGSQFITWRGIPLIPSNKIPVEDGKTKILLLRVGEK RQGIVGLFQPGLAGEQSPGLSVRFMGINRNAIASYLISLYCSLAVLTDDALAVLDDVEVD KYHDYPVNYK >gi|333032469|gb|GL891957.1| GENE 97 101000 - 101941 912 313 aa, chain - ## HITS:1 COG:BS_cysE KEGG:ns NR:ns ## COG: BS_cysE COG1045 # Protein_GI_number: 16077161 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Bacillus subtilis # 133 309 4 172 217 151 46.0 1e-36 MNQGKLVTQWNINAVVQGLQQARHDWRQQQHRTKEFGGRELPSKEALKAILDDLCGILFP MRLGPADLRQETEDSYIAYTLNRVLTALYAQVQLALNYEAKRHLSHSSPVQQPQELAQTI VQDFANTLPSIRRLLDGDVRAAYEGDPAAHSVDEVLLCYPGIFAIIYHRIAHQLYAQVPL LSRIISELAHSATGIDIHPGAQIGKGFFIDHGTGVVIGETCVIGERVRIYQAVTLGAKRF ETNDDGALKKDYTRHPIVEDDVVIYAGATILGRITIGRGSIIGGNVWLTHSVAAGSQILQ SPNESYQKNHIAG >gi|333032469|gb|GL891957.1| GENE 98 101960 - 102469 619 169 aa, chain - ## HITS:1 COG:Rv0390 KEGG:ns NR:ns ## COG: Rv0390 COG0607 # Protein_GI_number: 15607531 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Mycobacterium tuberculosis H37Rv # 40 168 1 139 140 100 41.0 2e-21 MNAKLNTETPQSFISNGSNTSFSAEDILAKAQQYAQEHELNFSGSLSPVDAWQLVQQGEA VLVDVRTNEERKFVGYVPESIHVAWATGTSFNRNPRFLKELESKVGKDKTILLLCRSGNR SAQAAEAAFNAGFEHIYNVLEGFEGDLNEQQQRNQKNGWRIHQLPWQQD >gi|333032469|gb|GL891957.1| GENE 99 102708 - 103445 231 245 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 6 242 4 238 242 93 28 5e-18 MNISIKTALVTGASRGIGRAIAERLAQDGFYVIINYVGNKAHAQATVEHIIEQGGQASAI QADVANEHEVSRLFQEAKAINGQLDVVVHSAGIMPMAKITPESLPDFDKVIHTNLRGAFL ILAHAAETVPDGGRIIALSTSVIAKSFPAYGPYIASKAGVEGLVHVLANELRGHNITVNA VAPGPTGTDLFYNGKTEEQVAAIAKLAPLERIGTPDEIAGVVAMLAGPDGCWVNSQVIRV NGGFA >gi|333032469|gb|GL891957.1| GENE 100 103571 - 104491 611 306 aa, chain + ## HITS:1 COG:PA2534 KEGG:ns NR:ns ## COG: PA2534 COG0583 # Protein_GI_number: 15597730 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 294 1 294 303 319 52.0 5e-87 MDKFDTLQLFTRIVELGSFSQAADQLNIPRATASNAIKELESNLQCRLLERTTRHVRPSL DGQAFYERCTQILSELDDAESSLRNVIAQPRGLLRVDLSGAHATKIVLPNIDQFHELYPD IELVISTGDRLVDLIREGIDCVVRAGRLDDSTLIARHLADMPQVICASPDYLNKHGTPQQ PEDLLSHYCVNFFSTSGGRNYPFELMVNSKKQDYFLKSWIAVNDAENYVLSALQGAGLIQ VPRYHVANELKNGRLVQVLSEWEIPKMSVSALYPQHRQLSPRVRVFVAWLSELYTGYFAN FEYPQK >gi|333032469|gb|GL891957.1| GENE 101 104529 - 105389 966 286 aa, chain - ## HITS:1 COG:ECs3874 KEGG:ns NR:ns ## COG: ECs3874 COG0625 # Protein_GI_number: 15833128 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli O157:H7 # 1 283 17 303 304 412 68.0 1e-115 MSDSNYIPPQVWQWTGEKTDLNQPTSGARYEHALPVGKHPLQLYSLATPNGQKVTILLEE LLALGHQDAEYDAWLIKIGEGQQFGSGFVEINPNSKIPALVDHSQNPPLRVFESGSILLY LAEKFKAFIPTDIAARTECLNWLFWQMGSAPYLGGGFGHFYAYAPVKIEYAINRFAMETK RLLDVLDQHLAKNEYLAGSEYSIADIAAFPWYGGLVKNWVYNGAEFLGVDQYKNVQRWAD AILERPAVQRGRMVNRTFGDLATQLHERHDASDFETKTQDKLQNQS >gi|333032469|gb|GL891957.1| GENE 102 105423 - 106049 608 208 aa, chain - ## HITS:1 COG:yfcF KEGG:ns NR:ns ## COG: yfcF COG0625 # Protein_GI_number: 16130236 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione S-transferase # Organism: Escherichia coli K12 # 1 208 1 211 214 192 50.0 4e-49 MNNEYFKLYTDSQFLSPYAFTVFVGLHEKQIPFEIAAIDLGQQGQFETSFVEKSLTAKVP VLEHNDFALSESSAILEYLEELYPDTAIYPKDIQARARARQIQAWLRSDLVALRTERPTD VIFIQPKSTPLSEEGKKAAEKLFFVAEKLLASDAEFLFGSWSIVDAELALMLQRLIQNGD AVSERLKNYALQQWQRPSVQKWLALRHK >gi|333032469|gb|GL891957.1| GENE 103 106169 - 107074 757 301 aa, chain - ## HITS:1 COG:BS_ywbI KEGG:ns NR:ns ## COG: BS_ywbI COG0583 # Protein_GI_number: 16080882 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 2 296 1 292 301 198 33.0 1e-50 MLSLKSLQCFVTLVKTKSFTRTAEELYLTQPTISKILQQLEEQLQVQLLVKPDHGRKRQI ELTEIGERIYQHAVELLQAEQNIFLEIENYQQLKTGTLKLGVPPLGSQLLTTALFDFHRQ WPDIELAFMEVGSRGIEQALLNNELDVGVLLQPFDEQTFNSIELCNYPLMVLLRRDATWA TRKKINLEELQHQSFLMFPENFSLNSIILDACKQHGFYPTIACRTSQWHLLADMVLQRMG IALLPQYYTDMLDPTLFAAVPLEKPNIQWHLVMAWKKNLPVSPAVQAWLSIVRQHFQHIK P >gi|333032469|gb|GL891957.1| GENE 104 107185 - 107616 290 143 aa, chain + ## HITS:1 COG:PA3432 KEGG:ns NR:ns ## COG: PA3432 COG1380 # Protein_GI_number: 15598628 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Pseudomonas aeruginosa # 18 135 12 129 129 65 33.0 4e-11 MSTESASGTPSQPSLFVLVKQILILAGFWWIGYLLHQKLGVPVSAGILGMFLLLLCLFFK IIKMDQVAMGATVVLGELLLFFVPVVVAVVQYKTLFMTEGWQIVLSIAVGTILVMLSTSL TIHYYNRLKAYLQARKRLQHKHI >gi|333032469|gb|GL891957.1| GENE 105 107630 - 108319 834 229 aa, chain + ## HITS:1 COG:BMEI1596 KEGG:ns NR:ns ## COG: BMEI1596 COG1346 # Protein_GI_number: 17987879 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Brucella melitensis # 12 225 21 234 235 158 42.0 1e-38 MNIWSILCLIWTLVAYVVAKRIYQKHPKLWLSPAISVPVLTIILMTIFGISYQTYAEDTQ WIVNLLGPATVAFAIPIYRYRETIRKNLGVLTIAIIVGMSVGVMTAYKMAQWFHFSPEVT NSLMARSISTPFAMILAEDIHGSAALVSLFTVITGLVGMICGDAILAITKIRSNVANGAA LGNAAHGFGTVRAQQRNSEEGVIASLTMVIAGILMVLIGPFAIHLWLLL >gi|333032469|gb|GL891957.1| GENE 106 108327 - 109817 1230 496 aa, chain - ## HITS:1 COG:RSc0030 KEGG:ns NR:ns ## COG: RSc0030 COG1167 # Protein_GI_number: 17544749 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Ralstonia solanacearum # 26 490 34 506 509 290 38.0 4e-78 MARMAKVVELPSIAKIDKSKGKISAQLTQALREAVQSGDLQPGDPLPSSRELALTLGVAR GTIIEAYDQLLAEGVFDSQPRTGTYVSHALVKTPVIQHSSKENKPNSISLTKSARSYAKV LDEFKPLPHVPFAVSVPVGRTQPSDIWRKFGNKFRSRGAGAPSGYGEPQGVLSLRIAIAD YVRRSRSVHCEPEQIVITPGIQQSLYICSQILFEAKDEVWVEDPAYRGTTAIFEHTVQNI RMVRVPVDEEGIQVETGIKLSKHARAAFVTPSHQYPLGMPMSLARRTALLAWAKQQNAWI IEDDYDSELRYNGQPFPSLQGMAPDQVIYLGTFSKVLFPSLRLGYAVLPKELVAPFCGLR VLIDRHPPAADQHVLAAFIQEGYLERHIRRTRNVYAEVREYIIGLIEKYIPQELAWLQPG DQGMHMVLWLAQHINDIDVASSAVDAGIAIKAISPTFSKERRRSGLIVGLGDFEPELMQQ AIKKLSKIIQQHAKSM >gi|333032469|gb|GL891957.1| GENE 107 109933 - 110568 615 211 aa, chain + ## HITS:1 COG:RSp0689 KEGG:ns NR:ns ## COG: RSp0689 COG2808 # Protein_GI_number: 17548910 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Ralstonia solanacearum # 1 205 1 205 212 294 65.0 6e-80 MYIPDDFAENRLDVLHSLITEHPFGVLFTHGSNGLDANHLPFELQTNEGKFGMLHAHVSR NNSVWQDIKNGDEVLVVFQAGDAYISPNWYPSKHEQRRQVPTWNYRVVHAYGKVTIRDDE RYVRGVVARLTRTHEASQPEPWKMSDAPKDYLEPMLKAIVGIEIEITKLQGKSKLGQNKE RRDILGVADGLSKSGHQTIANAMYSVADLNK >gi|333032469|gb|GL891957.1| GENE 108 110611 - 111204 1015 197 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|184157778|ref|YP_001846117.1| acetyltransferase [Acinetobacter baumannii ACICU] # 1 197 1 197 197 395 100 1e-109 MSLTTPVELLGEHVILKPLDVTQAEVLKEAVCDGELYNLWYTRVPRPEQMTAEIERRLDL QKSGSMLPFYIEDRKTGRALGMTTLMHIEEAHRRVEIGSTWYRKSAQRTPVNTECKKLLL AHAFETLNCIAVELRTSSLNVQSQAAIVRLGAKLDGVLRSHQIVKDDILRDTHVYSILKH EWPAVRQNLEWLLSKPR >gi|333032469|gb|GL891957.1| GENE 109 111212 - 112399 1167 395 aa, chain - ## HITS:1 COG:mlr8412 KEGG:ns NR:ns ## COG: mlr8412 COG0477 # Protein_GI_number: 13476942 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 8 383 14 392 405 212 37.0 1e-54 MLQNTMHRQVLILASSQSLFQTVSVMVMTIGGLAGANIANTPTLATLPIASMFLGTALMM FPASMLMARVGRRNGFLFGAFLGVLGGIIASIGIFYSSLMLLALGTLCVGAYQSFAQFYR FAASEVANDAFRSRAISWVMAGGIVAALIGPTLARFGGPLFQHLEYIGSFLIISIISLVA MGILSNLHIADIVEQKSNFTAGRPWQQIVFQPTYLVALFGAITGYGIMILGMTATPIAMR HSHHELGSITTVIQLHVLGMFLPSFFTGHLIARFGVLKIMFAGLLLFACYIGFALSGIQF TSFAISLILLGVGWNFLFIGSTSLLTGTYSVAEKAKAQAINDMTVFVVSLICSFSAGALL DLFGWKAMNMALIPWLVIAAASLFWLSQKREKQFV >gi|333032469|gb|GL891957.1| GENE 110 112804 - 114483 1986 559 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01460 NR:ns ## KEGG: ACICU_01460 # Name: not_defined # Def: putative malonate decarboxylase subunit alpha # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 559 1 559 559 1150 100.0 0 MEGSVQNKERLWTKRRHAKQLKLEMANQYTDGVVIPTQDIIKVLETLITPGDKVVLEGNN QKQADFLSRSLAQTNPDILHDLHMIMPSVGRSEHLDLFEKGIARKLDFSFAGPQSLRISQ LIEDGLLEIGAIHTYIELYSRLVVDLIPNVVLSAGFMADRQGNIYTGPSTEDSPALIEPA AFSDGIVIVQVNELVDDVSELPRVDIPASWVDYVVVADQPFYIEPLFTRDPKHIKPVHVL MAMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIP AIETGWVESVHCFGTELGMEKYVAARPDVFFTGRDGALRSNRMMCQLAGQYAVDLFIGAT LQVDGMGHSSTVTKGRLAGFGGAPNMGHDPRGRRHDTPAWLDMRLQGANETDTYLARGKK LVVQMVETFQEGGKPTFVDRLDAIDVAKTAGLPLAPIMIYGDDVTHLLTEEGIAYLYKAS SQEERQAMIAAVAGVTSIGLTQDPKTTARLRSEGLVVFPEDLGIRRTDATRELLAAKNIA DLVTWSDGLYQPPAKFRSW >gi|333032469|gb|GL891957.1| GENE 111 114486 - 115367 909 293 aa, chain + ## HITS:1 COG:PA0209 KEGG:ns NR:ns ## COG: PA0209 COG1767 # Protein_GI_number: 15595406 # Func_class: H Coenzyme transport and metabolism # Function: Triphosphoribosyl-dephospho-CoA synthetase # Organism: Pseudomonas aeruginosa # 13 286 17 286 293 229 54.0 4e-60 MAQVQYQTLSDSQLLADMAVEALIDEVNLTPKPALVDRRGSGAHNDLTLELMERSAKSLG PMFDAMAQAAKHHGKVCLALREDIGEIGRQGEKTMMLATNGVNTHRGAIWALGLMVTAAA LARSNQQYLSAVELCQLAGQIAQLEDRFIPKQALSHGQQVQKKLGILGAKEQAQQGFPTI VNFGLKQLYQSRSKPMKEEFARLDALLAMMTDLTDTCVLYRSGTSGLKHMQQGAQQVLDL GGSSSLEGRRALHLLEIDLLRMKASAGGAADLLAPTLFIDRVEQSSVKNKKGF >gi|333032469|gb|GL891957.1| GENE 112 115370 - 115669 374 99 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01462 NR:ns ## KEGG: ACICU_01462 # Name: not_defined # Def: malonate decarboxylase subunit delta # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 99 1 99 99 196 100.0 2e-49 METLHFEFVATEPPVKKALVGCVGSGDLEILMEPGEKGKTSIQVVTSVDGSAARWHNLFE RIFTAQIPPAVNIDIHDFGATPGVVRLRLEQALEEIAHD >gi|333032469|gb|GL891957.1| GENE 113 115662 - 116513 1169 283 aa, chain + ## HITS:1 COG:PA0211 KEGG:ns NR:ns ## COG: PA0211 COG0777 # Protein_GI_number: 15595408 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase beta subunit # Organism: Pseudomonas aeruginosa # 1 280 1 280 287 351 68.0 8e-97 MTDIQSLLNKQDFIELSARERAKALLDEGTFRELLDPFARVMSPWLVQQNIVPQADDGVV IAKGTIQEQPVVLISIEGLFQGGSLGEVGGAKIAGALELAVEDNLKGIPTAAILLLETGG VRLQEANLGLAAIAEIQAAIVNLRQYQPVIAVVAGSVGCFGGMSIAAGLCSYIVMTQEGR LGLNGPQVIEQEAGVQEYNAKDRPFIWSITGGNQRFTSGLVDAYVDDDRQKIRQQVIDYL TQGVPQQHRSSNYSFYLEKLQQVDTAEQITPAQVQALYQGEQT >gi|333032469|gb|GL891957.1| GENE 114 116510 - 117337 870 275 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01464 NR:ns ## KEGG: ACICU_01464 # Name: not_defined # Def: putative malonate decarboxylase subunit gamma # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 275 1 275 275 513 100.0 1e-144 MNIAVDTLKASTRGAHWFKALTQGFKTVEGFPASIWVADGQIDQQVVRVIAVVQDSNNLF PRAKQGEVGLLEGWSLAKVVDDVIQADAQAETKRAILCLVDVPSQAYGRREELLGIHQAL AGAVDSYARARLAGHPIVSLLVGKSMSGAFLAHGYQANRIIALKDSGVMVHAMGKESAAR VTLRSVDELEQLASSIPPMAYDIESYATLGLLSELLSVENPEQPTNDDLLLAKQAIAQAF KEINAEQSRGLEQRLHGQNRQMSKKVRELLREQWL >gi|333032469|gb|GL891957.1| GENE 115 117334 - 117936 446 200 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01465 NR:ns ## KEGG: ACICU_01465 # Name: not_defined # Def: phosphoribosyl-dephospho-CoA transferase # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 200 1 200 200 391 100.0 1e-107 MKLKLEAHDLLWGMTVDCLADDAPHWVREVLQRGDPVVVRRAITPVDQVAVGVRGQLRYQ RYAAQMPRSLISRQLKPEALTRVDTQQFEHLAERLQSISSIMKNFSECWGYTGSFGFELA TGIETVTEQSDIDLLIRAEQPFAKKQAVELLENFQQAGLNVDIQLQLPQGGLALKEWARN SRKVLLKRPDGAVLLENPWN >gi|333032469|gb|GL891957.1| GENE 116 117949 - 118887 880 312 aa, chain + ## HITS:1 COG:PA0214 KEGG:ns NR:ns ## COG: PA0214 COG0331 # Protein_GI_number: 15595411 # Func_class: I Lipid transport and metabolism # Function: (acyl-carrier-protein) S-malonyltransferase # Organism: Pseudomonas aeruginosa # 1 309 1 309 310 241 43.0 2e-63 MASIWVYPGQGVQRSNMLHDLAQTALAKEYLERASDALKEDVLMLDSPAALQSTRSVQLC LLISGVVSSALLTAENLTPDYVAGLSIGAWSAAVVAGVLAFEDAVRLVAYRGELMQNAYP TGYGMTALIGTDRATVETWVKQIYEIKPEVFVANINAHNQIVISGSFEAMNQVAVLAKQQ GVVAKKLDVSVPSHCELLSQQAKQLAASMEGMTLKQPKIRYLSGTTARTLSRPEQIGDDL AFNMSRTVDWESTIQAAWERGVRLQIEALPGTVLTTLARRTFKEGTVLSFQGTRLDSIQL AMQKEQANSFSF >gi|333032469|gb|GL891957.1| GENE 117 118936 - 119355 532 139 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01467 NR:ns ## KEGG: ACICU_01467 # Name: not_defined # Def: putative malonate transporter # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 139 1 139 139 229 100.0 3e-59 MIIYGVGLLALCTLVGVIAGDLLGVLLGVKSNVGGVGIAMILLICIRLWMEKRGMMTVET EKGVSFWGTMYIPVVVAMAAQQNVVAALSSGHMALFAAVVSVAVCTLTIAGLSRYNKASP LPKEEEDTALNRIGGKVHG >gi|333032469|gb|GL891957.1| GENE 118 119348 - 120112 1051 254 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01468 NR:ns ## KEGG: ACICU_01468 # Name: not_defined # Def: putative malonate transporter # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 254 1 254 254 388 100.0 1e-106 MVELLLKDLTHLGLITAFALIALIMWLSTKLSKYLTNGRVHASAIAIVIGLILAWFGGKM TGGEKGLTDLALFTGVGLMGGAMLRDFTIVATAFEVQATEAKKAGFIGAFSLFLGTILPF IVGCMFAWIFGYRDAVSITTIGAGAVTYIVGPVTGAAIGASSEVMALSIATGLVKAICVM VSTPLTAKFMGLDNPRSAMIFGGLAGTVSGVSAGLAATDRRLVPYGALTATFHTGLGCLM GPTILFFAVKALVG >gi|333032469|gb|GL891957.1| GENE 119 120162 - 121079 750 305 aa, chain - ## HITS:1 COG:PA0217 KEGG:ns NR:ns ## COG: PA0217 COG0583 # Protein_GI_number: 15595414 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Pseudomonas aeruginosa # 1 300 1 300 309 395 66.0 1e-110 MEIDEELTLKKIQIFLAFMRCGNLSKTAAEMQLSNVSVHKALHSLESALRCPLFKNEGRN LIPLKSAYVFEERAQKIVQDIFITVNKTREAAGFAAKVLHLGSLYSLTVNTIPNVISGLK LRRSELDIQLLLSSNQDLVKKLKATELDAIIVALNETTQDDDFEILPMFSDDIFLAVNKD SKYAEFKDIDLSLLKEETFLTLTKGFATHNDSDIIFKKAGFSPKVALQVNDIFTLISMVS SGVGFALLPGRISAVYESSVKLIPLKQQYHMQQEIGLVFLKSKERDPNLLALIAECRMFA SNFKR >gi|333032469|gb|GL891957.1| GENE 120 121177 - 122595 906 472 aa, chain - ## HITS:1 COG:STM1598 KEGG:ns NR:ns ## COG: STM1598 COG1167 # Protein_GI_number: 16764942 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Salmonella typhimurium LT2 # 1 470 1 470 474 424 45.0 1e-118 MYKSEQLAHSIRQLIESGTLNAHEKLPSLRDQVQRSGFSLMTVMNAYQELESQGLIYSKE KSGYFVAEQIALKPLEQYSIVSLNSKIEINSLVFKYLKSIQHESVVPFGSAFPDSQLLAA SKLIQIMGQLARQRQSYDQTASLPPGNLALRKLIAQRYCMQGIQTDPDDIVITSGGLDAL NLSLQAVAKPGDYILLQQTVFYGAWQAAERLGLKVITIPEHPQHGFDLEAFEQVIHTYPI KVCWLMLNSHNPIGFTVSDEIKYKIAKLLHEHQIYLIEDDVYEELYYGGQKPLSMKYFDQ QNLVLHCSSFSKTLGAGFRVGWVYAGKFSDHIQHLQLMSTISVNALIQNALVEFLSHHHY EKHLRTLRLSLERYKKQFYHYLKQHLPAICEIYYYPSGYFLWVKLPHKLDSMQIYEELIQ QDIGVAPSPLFSVLPAQQHYLRINCSFEWNEKIQAALDQVIKTIQQRVEASL >gi|333032469|gb|GL891957.1| GENE 121 122694 - 122828 98 44 aa, chain - ## HITS:1 COG:no KEGG:AOLE_11510 NR:ns ## KEGG: AOLE_11510 # Name: not_defined # Def: hypothetical protein # Organism: Acinetobacter_DR1 # Pathway: not_defined # 1 44 5 48 48 62 95.0 5e-09 MKKSSVKLSQTQWFILLWLGGFLALAVIAGLFKVILIYAAPYLK >gi|333032469|gb|GL891957.1| GENE 122 122843 - 123847 1125 334 aa, chain - ## HITS:1 COG:PA3929 KEGG:ns NR:ns ## COG: PA3929 COG1294 # Protein_GI_number: 15599124 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 2 # Organism: Pseudomonas aeruginosa # 2 334 3 335 335 377 61.0 1e-104 MIDLSLIWVGIIGLGVLIYVVMDGFDLGIGIMFPFIKNSQERDVMMNTVAPVWDGNETWM VLGGAGLYAAFPLVYSTVLSALYLPIIFMVIALIFRGVAFEFRFKAHRTKHLWDLAFIWG SVLTSFLQGIILGAYIQGIKTENGIFAGGPFDWLTAFSIFTGIGVVAMYATLGCGWLILK TEKGLQQRMYELMPKLIIALLIIFGAVSLYTPLTHPEIADRWFSLPNLFYFSPVPILVLL FVGLILSACKKQQDHKPFIYTLALVFLAFTGFVISLWPNIIPPSVTIWQAAAPHSSQMFA LVGALILIPIIITYTIVSYWVFRDKVRVGDEGYH >gi|333032469|gb|GL891957.1| GENE 123 123840 - 125084 1052 414 aa, chain - ## HITS:1 COG:PA3930 KEGG:ns NR:ns ## COG: PA3930 COG1271 # Protein_GI_number: 15599125 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Pseudomonas aeruginosa # 1 407 67 474 488 505 59.0 1e-143 MGVVSGVVMSYQFGTNWSEFSRVAGSITGPLLTYEVLSAFFLEAGFLGIMLFGWGRVGPR AHFFATLMVAIGTCISMFWILSSNSWMQTPQGFAIENGIIVPKDWLAIVFNPSFPYRFAH MGAAAFLVSSLLVVGTSAWHLVKGRRDELVKKSFSMGLWMVLVTSCLQVVIGDNHGLNTR EHQPAKLAAMEGHWETNHNEPMPLLLFAIPDMKEERNHFEVGVPYLGSLILTHSLDGQVT GLKEFAPEDRPNSTIIFWSFRVMVGLGVLMVTLSLIALWLRKRGKLYETSWFHKFAVVMG PAGYVAMLAGWITTEVGRQPWVVYGIMRTKDGLSHTVSADQVGLSLFIFVVVYTIVFGSG IYYTLKLINKGPVFIDTPNMEAGGVGHFKTPMRPLSAVDENIDSKQNSGENRHD >gi|333032469|gb|GL891957.1| GENE 124 125112 - 125285 142 57 aa, chain - ## HITS:1 COG:PA3930 KEGG:ns NR:ns ## COG: PA3930 COG1271 # Protein_GI_number: 15599125 # Func_class: C Energy production and conversion # Function: Cytochrome bd-type quinol oxidase, subunit 1 # Organism: Pseudomonas aeruginosa # 3 57 2 56 488 75 65.0 2e-14 MSLGLTALELARIQFAFTVSFHIIFPATSIGLACFLAVLEWKWLRTQNPIYKDLFKY >gi|333032469|gb|GL891957.1| GENE 125 125939 - 126757 601 272 aa, chain + ## HITS:1 COG:no KEGG:ACICU_01474 NR:ns ## KEGG: ACICU_01474 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 272 1 272 272 461 100.0 1e-128 MFITSQLNIIHKIIKNQSISTLVIDQLEQTYVNLEATLLRAKVLRDFSKTQTVYLIQSHI EPQQSSLAYLFSPFIFANLNKAAIYTTPATPLVLTILNKYYQADKKAVFKVDEVLESLKI YLDLELIEMGEAEFIYLNLIKALCRSDISTVFLITHLELDLETLKQLEQFLKIKIHWVKV VKDEGLKDLDQLDMRKLLFKNKDETHVQLCVLFAQMNAALVCLCDTFTASQMTHLIDDMF YSEHIFEKLSVYSEYMQTLLQSQHSLHKKQIA >gi|333032469|gb|GL891957.1| GENE 126 126876 - 128171 1437 431 aa, chain + ## HITS:1 COG:PA2324 KEGG:ns NR:ns ## COG: PA2324 COG1960 # Protein_GI_number: 15597520 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Pseudomonas aeruginosa # 36 426 20 411 419 364 49.0 1e-100 MTNLNFEHHLGSLTHAALSQVSIISRVWGEGPSERYDELASNFRPTFARIKEGALIREQQ HILPYEQLQWLKDIGFTRLRLPKAHGGFDATIPELFALLIELAEADSNLPQALRVHFGFT EDVLVSKDKAFQQRWISRIANGETVGSAWSEGGKESIDQFETHLYRDSDGKIRVKGKKYY TTGSLYADWVDVGVTDLKGESGSVVVRREDEGVEIVDDWNGFGQQLTASGTAYFHDVLVD EAEILPDDDRFKYSAAYYQLVQLAIITGLGRAATYDVSQAVAKRTRNYTHANAQFVKQDP QILQVVGQIRGAAYSAGAIVEKVAQSLQRAYLAAFQNNEQLEEEQNALAELESAQSQTVI TDLILNASTILFDALGASATDKDLGLDRYWRNVRTLSSHNPRVFKNRIVGDFSVNGTLPP YQWRIGEVAKQ >gi|333032469|gb|GL891957.1| GENE 127 128349 - 129740 1471 463 aa, chain + ## HITS:1 COG:PA2326 KEGG:ns NR:ns ## COG: PA2326 COG2141 # Protein_GI_number: 15597522 # Func_class: C Energy production and conversion # Function: Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases # Organism: Pseudomonas aeruginosa # 1 462 1 462 469 668 65.0 0 MTKRISFNAFEMNCIAHQSPGLWRHPQDRSVEYKDLEYWTDLAQILERGFFDGIFIADVL GIYDVYHQSAEHALTGAVQVPVNDPLQIVPAMAAVTKHLGFGVTTSISFEHPYPFARRIS TLDHLTKGRVGWNIVTSYLESGSKNLGLKTQVNHDNRYDIADEYLEVLYKLWEGSWEEGS VLRDRESGIFADHKKVHPIQHEGKYFTVPGIHICEPSPQRTPVLYQAGASSRGQKFASQN AECVFIAAPSKIATKKVVQGIRQKLVQEGRDPYSVKIYALLSIVTDETDAKAQAKFKEYQ SYGSYDGALTLLSGWSGVDFSQYQPTDKVEYIQTNAIQSLLDSYVNADPERVWTIEEIAN WNSLGGNGPVLVGSAETVSDALQQWVEDTDVDGFNLAYILAHQTFADVVEFIVPELQKRG VYQTSYAQGTLREKLFGAGPYLPENHRGAKYRNLKELKLAEAS >gi|333032469|gb|GL891957.1| GENE 128 129936 - 131402 1263 488 aa, chain + ## HITS:1 COG:Ta1391 KEGG:ns NR:ns ## COG: Ta1391 COG0477 # Protein_GI_number: 16082368 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermoplasma acidophilum # 35 481 31 459 459 146 26.0 1e-34 MSTQELDHNHRYEIKSPDDVSQLISKFAGKGKSNKVIWLALIGVFIDAYDLTTLSFGIEQ VISEFSLSPVMTGVVASAIVCGTIVGNLIGGWLTDKIGRYRVFMADMVLFVIAAIVAGFA PNVWVLILARFIMGISVGIDLPVAMSYLSEFSKFNGSSNKAARLAAWCPMWYAASSVCFG LVLALYFLLPPEHSNWLWRASLIFGAVPALLIIFIRGKYLTESPIWLANQGDLKGAAQVL QESYAIHAVATVEKVKRTAEKKKREGFAVLFNKTYLPRTIVAIVIHISVAFQYTTIAFFL PSILTRFFHTDVLTTITTTLGLNLLFAFTGGLLGVFVASRFKSRHVLLTGFLLQFIALIA LAFIGEPGNSFLLYTAIGMLGLWLFAEGFGPGAQMMVYPTMAYPASIRGVGVGFNRAVTG VAQAIALFVLPIWMAGYKTDVYLIISIFAFIPLIVIGLLIKFEPTAQDVDVVDEDKTELP LNNSPVID >gi|333032469|gb|GL891957.1| GENE 129 131464 - 132648 819 394 aa, chain - ## HITS:1 COG:no KEGG:ABAYE2213 NR:ns ## KEGG: ABAYE2213 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_AYE # Pathway: not_defined # 1 394 27 420 420 747 97.0 0 MFKHSQILTKTLITTSLLTFSLSSHAALTFGNAEEGQLKVSGTVRAKYVYDFDSEPSTSK FSFNDAVLWLDYNSPKWIGRLDYRVYEYYGRLGDANWLTDAWLGYKINDNSKIIAGLNPV PFGLGRFWGNTYYLGIANSAGWEDVHNLGVKYDFNDGTNEAQLAFYPTDGGTYRGKSKDS SRFSINPVNADDSVPQGTNTKEKNSIVVRGAHTFKNVLGQENFSTQLGASAWYSTIENKR SGQDGDRQVYSVFSNTNYNQWNLQLLAGYQDIDNADTQYKDHLTLGGFDYSFNSATKGQI YSAELSYLFPQQFGPITSVRPYLNYSSYRKEQDGFKNSTRFIPGIAFNYQKLTVQAELLM GKHDPYLGDSEGLAAGGSNDKWNKKAFVIFAYYF >gi|333032469|gb|GL891957.1| GENE 130 133108 - 134130 1036 340 aa, chain + ## HITS:1 COG:tauA KEGG:ns NR:ns ## COG: tauA COG4521 # Protein_GI_number: 16128350 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, periplasmic component # Organism: Escherichia coli K12 # 15 339 28 339 339 324 53.0 1e-88 MSTKTKPLIITAIVVVAIVAFIVWQNKKDNNTSASVRDNKPVVIAYQTGVDPSKVAQANG DYEKHSQRTIQWKKFDAGSDVVNALASGDVVLGNIGSSPLAAAASRNLPIEVFLITSKLG ASEALVVSNKSGIKTPQDLIGKTIAVPFVSTTHYSLLSALKHWNIPEDKVKIINLRPPEI SAAWERGDIDAAYVWEPALSKAKASGTVLTDSKQVGEWGAPTYDLWVVRKDFAEKNPDFL KAFVQTTLEQLEKYNQDPAAYVKDADNVQKIAQLTGSDAKDIPLLLSGNIYLDHAQQKQT LDGEFAQNIFDTAKFLKGQGKVDQLKADYKGNVNSSFLQP >gi|333032469|gb|GL891957.1| GENE 131 134140 - 134934 727 264 aa, chain + ## HITS:1 COG:ECs0420 KEGG:ns NR:ns ## COG: ECs0420 COG4525 # Protein_GI_number: 15829674 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type taurine transport system, ATPase component # Organism: Escherichia coli O157:H7 # 10 257 6 253 255 251 52.0 1e-66 MSVLEAKHIHLTFPKQQKPVLQDINLTIEEGSLTVILGESGCGKTTLLNILAGFQKPSSG DVLVNHEVVTGPDVTRAVVFQDHALLPWLNVADNVGFALQLKGLKRADIEAQVNAILKIV GLSHVEKANIWELSGGMKQRVGIARALISHAPFILLDEPFAALDAFTRENMQQLVLDLWI QQNKSFFLITHDIEEALLLSNQLVLMTAHPGKIVETLHLDFAQRYRQGESIRSIKSDSQF IQLREQLFESLRAQKQSGKEALPT >gi|333032469|gb|GL891957.1| GENE 132 134931 - 135800 939 289 aa, chain + ## HITS:1 COG:YPO0184 KEGG:ns NR:ns ## COG: YPO0184 COG0600 # Protein_GI_number: 16120525 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Yersinia pestis # 36 288 30 283 284 284 62.0 2e-76 MNTKDNVYEYDKAELKPELNVQTENASFLSSFFEKHRTLVVSIISVGSVVALWFLITALH VVPELFLPSPQAVWQKFISVSQEGFMKATLWQHLAASISRVFLALIAAVVIGVPLGLWMG LNKWVRAVLDPLVELLRPIPPLAYLPLLVIWFGIGETTKVLLIFFSILAPVIISSAHGVL SHQLNRERAALSLGASQSQVFWHVILPTALPHIITGIRIGLGVGWSTLVAAELVAADRGI GFMVQSAAQFLITDTVILGIIVIAIVAVSFELFLRWLQKQFSPWYGQQL >gi|333032469|gb|GL891957.1| GENE 133 135809 - 136690 841 293 aa, chain + ## HITS:1 COG:PA3935 KEGG:ns NR:ns ## COG: PA3935 COG2175 # Protein_GI_number: 15599130 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Probable taurine catabolism dioxygenase # Organism: Pseudomonas aeruginosa # 7 281 2 277 277 324 59.0 1e-88 MNTVVANLNIEVIKPTIGAIIHNIDLNALNEQTTQQIQQALLDHQVIFFRKQQLAPQAQA DLARSFGTLHVHPIYPSIEDVPEVMVLDSWKQDLRDNELWHTDVTFSKTPPLGCVLQAIK IPPVGGDTLWSSNTAAFKGLPLELQRKLRGLTATHDIRKSFPLERFAHNEEEREKLLQTF KRNPPVVHPVVRTHPVTGEPLLFVSEGFTTRINELPEQESEQLLNFLFEHATQEQFHLRW KWQDGDVAIWDNRCTQHKALFDYGDAHRIMHRATINGDVPFYKEEQQPELAEA >gi|333032469|gb|GL891957.1| GENE 134 136758 - 137492 563 244 aa, chain - ## HITS:1 COG:SMa1652 KEGG:ns NR:ns ## COG: SMa1652 COG4126 # Protein_GI_number: 16263357 # Func_class: E Amino acid transport and metabolism # Function: Hydantoin racemase # Organism: Sinorhizobium meliloti # 1 242 1 240 261 228 52.0 1e-59 MKIKIINPNTTQSMTDKIAASAKIVANSDTQIIAVSPQMGPATIESYYDEALSAVGVLEE IRQGELLDVDAYVIACFGDPALYAAREISSAPVIGIAEAAMRTASYVSTGFSVVTTLQRT VNMSWHLAHRYGATPFCKNVRACDIAVEELELPDSDAYRTIRDECKKALAEDKSDAIVLG CAGMSDLCIKLQNELGVIVIDGVAAAVKQAEMLVQLNLKTSKVGDWASPPVKNYTGILSG FGMS >gi|333032469|gb|GL891957.1| GENE 135 137489 - 138958 1186 489 aa, chain - ## HITS:1 COG:YPO1083 KEGG:ns NR:ns ## COG: YPO1083 COG1953 # Protein_GI_number: 16121384 # Func_class: F Nucleotide transport and metabolism; H Coenzyme transport and metabolism # Function: Cytosine/uracil/thiamine/allantoin permeases # Organism: Yersinia pestis # 1 476 1 479 494 541 59.0 1e-153 MNNTEAIIKSSYDAKLTNQDLAPLKKQTWGAYNIFAFWMSDVHSVGGYVMAGSLFALGLN SWQVLLSLLIGIAIVQFFTNLIAKSSQQTGTPYPVICRATFGVLGANIPAVIRGLIAVAW YGIQTYLASSAFLLVILKFFPDWSAYADVSTYGFLGLSYLGWVGFMLLWLLQAIVFWSGM DSIRKFIDWAGPAVYVVMFAMAVWLIWKAGWQNIDLNLSGVQYDGFAVVPVMIGAIALVV SYFSGPMLNFGDFSRYGKSFNAIKMGNFLGLPINFLGFSLLTVVCIAATLPVYGKLITDP VEMVGKLDNTFVVILGSLTLMIATIGINIVANFVSPAFDFSNVSPSKISWRMGGMIAAVG SIFITPWNLFNNPQVIHYTIDILGAFIGPLFGVLLADFYLVKKQKIVVDDLYTLDTQGSY WYKNGYNHSAFYALIPASLIPILCVLLPQLSGLANFTWFIGMGFGFVIYRFLNQPLAHAK SAMTKVKVQ >gi|333032469|gb|GL891957.1| GENE 136 139369 - 140106 790 245 aa, chain + ## HITS:1 COG:PA1520 KEGG:ns NR:ns ## COG: PA1520 COG1802 # Protein_GI_number: 15596717 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 7 227 16 233 259 157 40.0 1e-38 MSSNAPKKAVEMSNDEIDDHIYNAIVDAILNRQLAPGARLVEAPLCEAFGVTRGVLRRVF VKLAHDKVIEIQPNRGALIAKHSTNETKEVFEARSMLEIATVKKLAQKSHRLDLSELRSL VDQESHERLAGNWAEWIKLSGQFHLKLIEANQNSIMTSYLQTLIARTSLLIGLYEIPKHN NCSADEHRAILDAIEQGDEKRATQLMEEHLEHYATTFIEENSTVSAEQNLLNLFKNKKIE TPQTN >gi|333032469|gb|GL891957.1| GENE 137 140146 - 141036 483 296 aa, chain - ## HITS:1 COG:slr1871 KEGG:ns NR:ns ## COG: slr1871 COG0583 # Protein_GI_number: 16330261 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Synechocystis # 1 288 1 289 295 172 33.0 7e-43 MDRLDCISTFVSVVEHGNFSSAARALDISRDLVAKRVCYLENDLKTTLLNRTTRQMNLTS CGEKFYQHCKVILSEFEWATYEISYNQQYPEGELKLNTPMSFSNIFLQHIISDFIEKYPS IKIDLFMTDQLLDVNQHKFDLTIRLDGSAPSLANSKILNTYQRYLYATPEYFNQHGLPNS LEELKEHKFLIYYQDSRHKKLIFQKDQKEVSFNCFPVMTCNNGELLLDMCLKDHGIVFLP EFIAEPYYKEGKLQKCLEDYTSQPLHLYVTWPNRKILSKKVKLFIDFLTHQIIPIK >gi|333032469|gb|GL891957.1| GENE 138 141232 - 141918 724 228 aa, chain + ## HITS:1 COG:RSc0242 KEGG:ns NR:ns ## COG: RSc0242 COG1335 # Protein_GI_number: 17544961 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Ralstonia solanacearum # 1 227 1 227 228 392 82.0 1e-109 MNKSLLEQLSPTNCQVIFIDHQPQMAFGVQSIDRQVLKNNTVGLAKAAKTFNIPVTITTV ETESFSGHTYPELLDVFPDAPLLERTSMNSWDDQKVRDSLARNNRKKVIVSGLWTEVCNN TFAFGAMLEGDYEIYMVADASGGTSKEAHDYAMQRMIQAGVVPVTWQQVLLEWQRDWAHR DTYDAVMAIVREHSGAYGMGVDYAYTMVHKAPERTTSKHEVLAPIPAK >gi|333032469|gb|GL891957.1| GENE 139 142029 - 143903 1961 624 aa, chain + ## HITS:1 COG:PA2699 KEGG:ns NR:ns ## COG: PA2699 COG1574 # Protein_GI_number: 15597895 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pseudomonas aeruginosa # 5 624 4 612 612 806 63.0 0 MTDINLILKNGKITTLDPQNPEVQAIAIADGKVVRTGTTDEVMKLATPTSKVVDLNGRRV IPGLNDSHLHIIRGGLNYNMELRWEGVPSVADALRLLKEQADNTLAPQWVRVVGGWTEFQ FAEKRLPTLEEINKAAPDTPVFVLHLYASAMLNRAALDVLGFNKDTPDPPGGKIVRNEKG EPTGLLLATPSAMILYSTLGKAPKLPVEDQVNSTRHFMRELNRLGITSAIDAGGGGQNYP EDYDVIKQLHDQNQMTVRIAYNLFAQKAGQELDDYRRWTEMTFPGDGDELFRMNGAGENL TWSAGDFEDFYEPRPDLPEKMEGELEAIVEHLAEKKWPFRIHATYDESISRLLNVFERVN SKQPFATRFIIDHAETVSERNIERIGALGGGIAIQHRMAYQGEIFVKRYGAEAAQATPPV KKMLELGVPVGAGTDATRVASYNPWVCLYWLTTGKTVGGLPLYDEKNLLDRQTALKLWTK GSAWFSGEKDVKGSLTAGELADLVVLSDDYFKVEAEDIQWIESVLTVLGGKVVYAGAEFK QDDPPLPPASPTWSPVKRFGGQWRLSENRNAPSNQSLQSQSALCACASSCGMHGHSHAWM LDVPVNDKDKKSFWGALGCSCFAF >gi|333032469|gb|GL891957.1| GENE 140 143961 - 144122 117 53 aa, chain + ## HITS:1 COG:AGl1747 KEGG:ns NR:ns ## COG: AGl1747 COG4317 # Protein_GI_number: 15890988 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 51 22 72 117 73 66.0 1e-13 MKMYLLSLAVGLLVGVLYYVLNVKSPAPPLVALVGLLGMVIGEQLLPFIKSYF >gi|333032469|gb|GL891957.1| GENE 141 144191 - 144619 539 142 aa, chain - ## HITS:1 COG:ECs4375 KEGG:ns NR:ns ## COG: ECs4375 COG1393 # Protein_GI_number: 15833629 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Escherichia coli O157:H7 # 5 142 4 141 141 184 61.0 3e-47 MTELVKIYHNPACGTSRNTLALIRHAGIEPIVIEYLQTPPSKDELIQLIKDSNLSVREAI RKNVDPYKDLEIEQDHWTDEQLIDFMVQYPILINRPFVVTQKGTRLCRPSEIVLDILDSQ NLGYFAKEDGEIIIDEQGRRIK >gi|333032469|gb|GL891957.1| GENE 142 144704 - 145033 112 109 aa, chain + ## HITS:1 COG:PA2277 KEGG:ns NR:ns ## COG: PA2277 COG0640 # Protein_GI_number: 15597473 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pseudomonas aeruginosa # 1 85 1 85 116 99 54.0 1e-21 MINQVDFFKCLSDQTRLNILKLVLNKQNICVCELTEQLELSQPKISRHLALLRTHGVLLD ERKGQWVYYSLNPDLPVWALDILKVIENDESGTKVKQQDQSFITTTCCD >gi|333032469|gb|GL891957.1| GENE 143 145138 - 146172 1019 344 aa, chain + ## HITS:1 COG:MTH900 KEGG:ns NR:ns ## COG: MTH900 COG0798 # Protein_GI_number: 15678920 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenite efflux pump ACR3 and related permeases # Organism: Methanothermobacter thermautotrophicus # 6 343 17 354 365 389 63.0 1e-108 MTKQGLSFLDRNLTLWIFIAMALGLAIGVFFPQASVSLNELSVDNVNIPIAIGLVLMMYP PLAKVEYAALPEVFKDKKTLTLSLIQNWIIAPVLMFILAIVFLHNYPEYMTGLILIGLAR CIAMVLVWNGLACGDNQYVAALVAFNSIFQILFFSTYAWLFLTFLPPYFGVAGQVIDVNF WTITHAVLVYLGIPFLMGFLTRLILVKSKGLEWYQTKFLPKISPISLIALLFTIVAMFSL KGGDVVSLPLDVLRIAIPLTIYFVVMFFISFFMSKRMRNNYPRTAAISFTAAGNNFELAL AVAIATFGLASPVAFTTVIGPLVEVPVLISLVTVSLWLKKKYYS >gi|333032469|gb|GL891957.1| GENE 144 146263 - 147165 889 300 aa, chain - ## HITS:1 COG:STM3121 KEGG:ns NR:ns ## COG: STM3121 COG0583 # Protein_GI_number: 16766421 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 2 289 1 287 292 187 37.0 3e-47 MLDLYKLHAFVVVVEERNITHAANRLFIQQPPLTRLLKKLEQELGTQLLIRQPRGIEPTE AGLALFKEAQLLLEHARHIPQLVQDVSQGKTGQLNIGFTSSAGLHPLISLVLRSYREMYP AVQTKLEEAGSQKQLDWLISEKLDIAFLRAPISRDIGLKHLHILNEPMVVALPIGHPLTQ KKKISLSNLSEENFVLYRRSSGQGLYDNILYSCYQAGFSPRIIQEAPRPTATLNLVAAGI GISIVPASMHNFWDHEIVYREFDDSIKLNAPIYLITRENENSAKVSNFIELMQKLLPTMT >gi|333032469|gb|GL891957.1| GENE 145 147267 - 147827 481 186 aa, chain + ## HITS:1 COG:RSc0979 KEGG:ns NR:ns ## COG: RSc0979 COG2059 # Protein_GI_number: 17545698 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Ralstonia solanacearum # 14 184 20 190 193 121 42.0 8e-28 MNHVEIAVQKDTVPTCTELFLGFLTLGLIGFGGVLPLARKVIVEQRHWLSPEKFTELLGL CQFLPGGNIINLSVAIGMEFRGVRGAVSSLIGLIFAPTVIVVLLHYVYEQFQDNLMVKHL FEGLGAAAAGLLVATGLKMLKPLLRNPLAICVVVAAIVSIALLKIPLLLTMLILLAFYSA IIWRRV >gi|333032469|gb|GL891957.1| GENE 146 147827 - 148348 591 173 aa, chain + ## HITS:1 COG:RSc0980 KEGG:ns NR:ns ## COG: RSc0980 COG2059 # Protein_GI_number: 17545699 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Ralstonia solanacearum # 3 171 10 178 181 105 35.0 5e-23 MGAVLLTLAIIFTQLSLIAFGGGNTILPEMQRQVVDIHHWMTAQEFSALFAMAQAAPGPN MMIVPLVGWHVAGLSGLLVTSTAKFLPSSLITVFVMRGWSKFKDKKWRRVLQLALQPVTV GTVLASAWIISEAAAINTLLIIMVVIATLLSLIKKVHPLHVLIAGAVFGVVLL Prediction of potential genes in microbial genomes Time: Tue Jun 21 02:54:17 2011 Seq name: gi|333032468|gb|GL891958.1| Acinetobacter baumannii 6014059 genomic scaffold Scfld607, whole genome shotgun sequence Length of sequence - 7554 bp Number of predicted genes - 12, with homology - 12 Number of transcription units - 5, operones - 2 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 + CDS 2 - 289 282 ## COG5295 Autotransporter adhesin 2 1 Op 2 . + CDS 379 - 1665 1581 ## COG5295 Autotransporter adhesin 3 1 Op 3 . + CDS 1723 - 2502 787 ## COG2913 Small protein A (tmRNA-binding) + Term 2515 - 2563 10.2 - Term 2510 - 2544 1.5 4 2 Tu 1 . - CDS 2614 - 2973 366 ## COG0212 5-formyltetrahydrofolate cyclo-ligase - Prom 3073 - 3132 4.2 + Prom 3340 - 3399 7.4 5 3 Tu 1 . + CDS 3461 - 3781 337 ## ACICU_00996 hypothetical protein + Prom 3852 - 3911 5.2 6 4 Tu 1 . + CDS 4075 - 4392 332 ## ACICU_00997 hypothetical protein + Term 4474 - 4530 2.9 - Term 4786 - 4812 -0.7 7 5 Op 1 . - CDS 4813 - 5076 318 ## ACICU_00998 hypothetical protein 8 5 Op 2 . - CDS 5077 - 5799 455 ## ACICU_00999 hypothetical protein 9 5 Op 3 . - CDS 5796 - 6203 363 ## ACICU_01000 hypothetical protein 10 5 Op 4 . - CDS 6204 - 6455 188 ## ACICU_01001 hypothetical protein 11 5 Op 5 . - CDS 6457 - 7389 663 ## ACICU_01002 hypothetical protein 12 5 Op 6 . - CDS 7386 - 7553 180 ## ACICU_01003 hypothetical protein Predicted protein(s) >gi|333032468|gb|GL891958.1| GENE 1 2 - 289 282 95 aa, chain + ## HITS:1 COG:BMEI1873 KEGG:ns NR:ns ## COG: BMEI1873 COG5295 # Protein_GI_number: 17988156 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Brucella melitensis # 2 82 408 488 505 65 45.0 2e-11 KDLTLNSVTTGDSVLNNNGLTIKDGPSITKDGINAGGKKITDVANGVIAQNSKDAVNGGQ VHHISNSIKNSIGGNTVVNPDGSLTTPPPLIRMVV >gi|333032468|gb|GL891958.1| GENE 2 379 - 1665 1581 428 aa, chain + ## HITS:1 COG:SMc01708 KEGG:ns NR:ns ## COG: SMc01708 COG5295 # Protein_GI_number: 15964211 # Func_class: U Intracellular trafficking, secretion, and vesicular transport; W Extracellular structures # Function: Autotransporter adhesin # Organism: Sinorhizobium meliloti # 70 402 971 1266 1291 65 28.0 2e-10 MTQKGLNFGANDQKTTQGKAVHRKLGDTINIVGGANPETAEDKTSGENIITRTTEDGVKI EMLKDVKFDSVNVGGHVLNQQGLTIKGGPSITVNGINAGGKQITNVADGINAKDAVNKGQ LDKQINEVKDQIGKDIGKLSDHAVQYDKDKNGNVDKNSVTLGGGEKGTNLKNVADGKIAE GSKDAVNGGQLWNVQNQVDKNSNDIKNIQNNIDNISNGKAGLVQQQKPNGEITVGKDSGG TSINMAGKEGDRVVQGVKDGEIKAGSNQAVNGGQIHKISESIKNSIGGNTTIDPKDGSIT TNNIGGTGKNNINDAIGTLNQSNQELGNKITNLGDQLQQVFYDTNKRIDDVEKKANAGIA AAMALENAPFVAGKYTYAVGAAYHGGENAVGVTLRKTSDNGRWSITGGVAAASQGEPSVR VGISGVIN >gi|333032468|gb|GL891958.1| GENE 3 1723 - 2502 787 259 aa, chain + ## HITS:1 COG:PM0586_1 KEGG:ns NR:ns ## COG: PM0586_1 COG2913 # Protein_GI_number: 15602451 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Small protein A (tmRNA-binding) # Organism: Pasteurella multocida # 49 117 57 123 125 63 40.0 3e-10 MNKTIQSLVVAAFAGFAVTTYANEQAQQQKIHFPAIEKSYLKQVKRYEYQDVARLDTGLN KDQIRALLGNPQFSEGLFAVKVWNYVLDIRVPNTHQYQRCQLRIDFDKHYLAERLSWKGE ACEGLVVLGANNQAPERSTVIADRTASVLFAFERFDASAIEEGTNSVVKIAEQIKKSPTT TPIIVSGFTDPLGKFSYNQELSSKRANTVAKLLVRQGVEPSRIQIQANSQTDLYKQCSDN NSSQLIQCLAPNRRVNISW >gi|333032468|gb|GL891958.1| GENE 4 2614 - 2973 366 119 aa, chain - ## HITS:1 COG:PM1721 KEGG:ns NR:ns ## COG: PM1721 COG0212 # Protein_GI_number: 15603586 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Pasteurella multocida # 42 112 120 190 190 68 45.0 3e-12 MICSMKQRLVWVKINKNQYLSRRFSHHPLGMKEPMATRGKHVAQLDLLLMPLLACDHYGT RIGMGGGYYDRTLASAKHKPYRLGLAHQFQFIEHTLERQSWDQPLDGLLTPQHFYYFKR >gi|333032468|gb|GL891958.1| GENE 5 3461 - 3781 337 106 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00996 NR:ns ## KEGG: ACICU_00996 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 106 1 106 106 193 100.0 2e-48 MMLCVALLSACTKQAESEAPQIDYKAQFEESDRKIGEFLDQLDNPNTPQEVKVKILCHDY PDVYKKQYMPALIKVSPKPYTEEKLLSDLKSATDYYKGTLGIKCNE >gi|333032468|gb|GL891958.1| GENE 6 4075 - 4392 332 105 aa, chain + ## HITS:1 COG:no KEGG:ACICU_00997 NR:ns ## KEGG: ACICU_00997 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 105 1 105 105 192 100.0 3e-48 MKFKILLLSFIATGCYANESTADPDICNIVKKVAYNVMEARQQKVPAQDLQQIADGLADE KAKQLYQDLISSAYAAKVFKTSFFKRQAIEDFQAGWYEECLRRNE >gi|333032468|gb|GL891958.1| GENE 7 4813 - 5076 318 87 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00998 NR:ns ## KEGG: ACICU_00998 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 87 1 87 87 166 100.0 3e-40 MSRLTKLDRMTHAEKEAAKKEFWEAADNQTFPPETVAIVMHVSLPWLQKKRCEGGGIPFS KPHKRQVNYMKSDVLAYIEQNKMAHTA >gi|333032468|gb|GL891958.1| GENE 8 5077 - 5799 455 240 aa, chain - ## HITS:1 COG:no KEGG:ACICU_00999 NR:ns ## KEGG: ACICU_00999 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 240 1 240 240 455 100.0 1e-127 MSESTLWAVAMRPEGYSPFKQTPAASKEIAERAVERYRKMHEKEGNNFFLEIFDDVIKVQ KWHGSRKDHIKNLFYVESWFSEPMYQCFDLKTAERVFKFDEIVICYKKGSAPLVTKSFDE AKLFYGSSETGFKYQIQPIEPPENLFNWFHPDIELFDTIEEGAEAYTREQWAQLQMNLRV EIETQLLDYDEIPNIPEDAVVWPNWKPEPPEQGLFLIAAFDSEDGPVLWWANPKAESKEK >gi|333032468|gb|GL891958.1| GENE 9 5796 - 6203 363 135 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01000 NR:ns ## KEGG: ACICU_01000 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 90 1 90 90 172 97.0 3e-42 MTGNERIPFESQFKTTEIFKRESAIRKNDILAFSETMNGYFNIVTNDAWQLWNKAKAETV PDTPTPSVTLTCAELKEAFDFGAPDGEKDQFQMETEMTIKWLQDGYDGEGYYCWYADLPE EGCIKLGVSESGAEG >gi|333032468|gb|GL891958.1| GENE 10 6204 - 6455 188 83 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01001 NR:ns ## KEGG: ACICU_01001 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 83 1 83 83 143 100.0 2e-33 MKDQYKKVSQKHMLGFMYYLQLLGYVIVRQGMDQAMFLTKHYAVPVAWRRITIDYHNRLN KPAQQLYKEFVEWTKEEYAEMVA >gi|333032468|gb|GL891958.1| GENE 11 6457 - 7389 663 310 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01002 NR:ns ## KEGG: ACICU_01002 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 310 1 310 310 575 100.0 1e-163 MKILNKVEAKLAWANGELLLVNNTERNGWEPFNPYDFGFDVFDKFEFQLKPRTIFIGEFE VPEPLRVAPEKGSTCSYPSPTVELGVQQFKWNGSKGQLRMLQHGQVHSSFDNAFAHCCAI IKISGGEFAEDILKLLNKPTEEVEEEKPSESHAESLKVKNSKPEVVEKAQTAEPAIESET ADSEYQKKLDTLLQRVKDSKTPDEVNAVYRYTRTWSDKQMEPLLLATHKRLEELEKSKAQ ATEPPSLMVQIQNAPDLTTLDALEIDVAARDPQIQSRLMDFVKKRRFELENPTSTPLQEA EPDYLLGDGF >gi|333032468|gb|GL891958.1| GENE 12 7386 - 7553 180 55 aa, chain - ## HITS:1 COG:no KEGG:ACICU_01003 NR:ns ## KEGG: ACICU_01003 # Name: not_defined # Def: hypothetical protein # Organism: A.baumannii_ACICU # Pathway: not_defined # 1 55 319 373 373 105 100.0 6e-22 DQQRDELQNFIAERGLDVKTVCEHFGIDALIQIEAAKLTAVKQEIETLAKTGMTA