Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:13:47 2011 Seq name: gi|325481887|gb|AEXN01000001.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00037, whole genome shotgun sequence Length of sequence - 25293 bp Number of predicted genes - 28, with homology - 27 Number of transcription units - 13, operones - 5 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 32 - 379 438 ## Apre_0631 hypothetical protein - Prom 402 - 461 4.9 - Term 787 - 821 4.0 2 2 Tu 1 . - CDS 831 - 929 64 ## - Prom 980 - 1039 8.1 + Prom 1566 - 1625 3.3 3 3 Tu 1 . + CDS 1673 - 2332 629 ## COG1284 Uncharacterized conserved protein + Term 2335 - 2394 15.5 - Term 2522 - 2566 -0.1 4 4 Tu 1 . - CDS 2625 - 3572 846 ## Apre_1590 2-keto-3-deoxygluconate permease - Prom 3633 - 3692 11.3 5 5 Tu 1 . + CDS 4428 - 6389 2844 ## COG3808 Inorganic pyrophosphatase + Term 6392 - 6453 13.1 + Prom 6794 - 6853 11.2 6 6 Tu 1 . + CDS 6900 - 7616 465 ## Apre_1445 hypothetical protein 7 7 Tu 1 . - CDS 7817 - 8767 1037 ## COG0598 Mg2+ and Co2+ transporters - Prom 8794 - 8853 17.8 - Term 8843 - 8874 0.1 8 8 Op 1 . - CDS 8876 - 9508 657 ## Apre_0193 hypothetical protein 9 8 Op 2 8/0.000 - CDS 9489 - 10355 874 ## COG1131 ABC-type multidrug transport system, ATPase component 10 8 Op 3 . - CDS 10348 - 10725 441 ## COG1725 Predicted transcriptional regulators - Prom 10814 - 10873 11.6 - Term 10863 - 10889 -0.6 11 9 Op 1 . - CDS 10943 - 11413 541 ## DvMF_0328 hypothetical protein 12 9 Op 2 2/0.000 - CDS 11423 - 12448 1391 ## COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 13 9 Op 3 6/0.000 - CDS 12458 - 13291 1036 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 14 9 Op 4 . - CDS 13291 - 14331 1312 ## COG1145 Ferredoxin - Prom 14462 - 14521 14.8 - Term 14585 - 14615 1.1 15 10 Op 1 . - CDS 14624 - 15118 655 ## gi|212695928|ref|ZP_03304056.1| hypothetical protein ANHYDRO_00461 16 10 Op 2 . - CDS 15196 - 15729 735 ## Thebr_1590 capsular exopolysaccharide family (EC:2.7.10.2) 17 10 Op 3 . - CDS 15722 - 16612 1166 ## Apre_0247 lipopolysaccharide biosynthesis protein 18 10 Op 4 . - CDS 16614 - 17393 707 ## Apre_0246 hypothetical protein 19 10 Op 5 . - CDS 17395 - 18405 896 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 20 10 Op 6 . - CDS 18357 - 18539 111 ## gi|212695924|ref|ZP_03304052.1| hypothetical protein ANHYDRO_00457 - Prom 18567 - 18626 9.7 - Term 18611 - 18638 -0.8 21 11 Tu 1 . - CDS 18651 - 19535 964 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 19593 - 19652 4.2 22 12 Op 1 2/0.000 - CDS 19678 - 20340 861 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 23 12 Op 2 . - CDS 20340 - 21131 740 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - Prom 21151 - 21210 8.8 24 13 Op 1 1/0.000 - CDS 21242 - 22057 945 ## COG0561 Predicted hydrolases of the HAD superfamily 25 13 Op 2 . - CDS 22129 - 23424 1135 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 26 13 Op 3 . - CDS 23421 - 23978 476 ## Apre_0314 hypothetical protein 27 13 Op 4 . - CDS 24041 - 24697 876 ## COG0637 Predicted phosphatase/phosphohexomutase 28 13 Op 5 . - CDS 24699 - 25145 697 ## COG1661 Predicted DNA-binding protein with PD1-like DNA-binding motif - Prom 25213 - 25272 10.1 Predicted protein(s) >gi|325481887|gb|AEXN01000001.1| GENE 1 32 - 379 438 115 aa, chain - ## HITS:1 COG:no KEGG:Apre_0631 NR:ns ## KEGG: Apre_0631 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 115 1 115 115 184 97.0 1e-45 MNLADPKDITVKIFLLIPIILCLFSSYMIDKTNGNIIAGFNTMEEDKKEELIRKGYLSKV KKMTFIMSIPLVIAFLSSFFVKNIKLYNDILMGSWGLFGIITILGIVVVNYSVRK >gi|325481887|gb|AEXN01000001.1| GENE 2 831 - 929 64 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKLGTILISVVGNVVAHYIIKWLDRYYKHDN >gi|325481887|gb|AEXN01000001.1| GENE 3 1673 - 2332 629 219 aa, chain + ## HITS:1 COG:SPy2153 KEGG:ns NR:ns ## COG: SPy2153 COG1284 # Protein_GI_number: 15675895 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 19 197 16 189 290 93 31.0 3e-19 MLRKFLRSLEVTKKEFLIISLGCAIMAFGVINVHEQAQITEGGVLGLGLFLKKAFNMNLA YTTPILDGLCYVLGFSMLGRIFLKKSIVATIMFAVFYWIFDFIGPVIPSLYDMPFLAAIF GGIFIGCGCGIAVTAGGCAGGDDALAMTISKKTKWPISRAYLFTDYLVLGLSLIYIPFGH LIYSFLTTLISSFLIGQFELKMEIPAWQVCQGNLKQAKS >gi|325481887|gb|AEXN01000001.1| GENE 4 2625 - 3572 846 315 aa, chain - ## HITS:1 COG:no KEGG:Apre_1590 NR:ns ## KEGG: Apre_1590 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: A.prevotii # Pathway: not_defined # 1 306 1 306 312 192 35.0 2e-47 MFSKIFRKVPAALIVVPMLFAAFINSFFPKFFNLGPTSSSIASVDGLNAIISITLVAVGS QLTLSRLKKALSRGLTLFISKWVSSIVLGFIFIKLFGNKGIFGISSLCFIAAISNQNNSI FVGLINDYGDEYDMASAAITSIISVPIFTFLTLSILKVADITPSSILDLALPILVGIFLG NIDKDFCKFLGQSQKYILVFLGFSIGASINLSTIIEGRLGGIILSILTVLSAFLFTVPAD ILINKRPGWAAISIYTAAGNAIIVPALVSDLDKSWQATRAISQAQLGTVVIFTSILVPIV VGLWNKKFGVEKIKR >gi|325481887|gb|AEXN01000001.1| GENE 5 4428 - 6389 2844 653 aa, chain + ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 35 653 38 668 671 532 56.0 1e-151 MLSDFLPVIVAVIAICFMALQIKTNILPVSEGNDRMRTISGNIKEGAMAFISREYKYVII FVIVVAILIAIFINVSTMICYIFGSLLSMAAGYVGMRISTASNARCTNEAKESGLSSALK VAFAGGSVMGFAVTGFGLLGVGIVYLIFRDPAILMGYSFGASSVALFARVGGGIYTKAAD VGADLVGKVEKGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYAGAILSSMVLGFSI FGDAGIRFPLVLSSIGIVASILAAFLFLRKKQKSPQSALMMTIYLSGAIVLIASFILSPI FFGNMKAAICIVVGILVGIAIGFLSEVFTSEKYSQVKRIAEESQTGAATNIIAGLSSGML STVGPIILIAVGILVSFHTMQMYGIALAAVGMLSITATTVTVDAYGPISDNAGGIAEMSG LEESVREITDSLDSVGNTTAAIGKGFAIGSAALTALSLFVTYTDTLNLDNLSLLDSKVVA GMFVGGMLPFLFSALTMNSVGKAATEMINEVRRQFREKPGILEGTDQPDYASCVDISTRA SLKEMVIPGALAIVVPLFVGKVFGAETLGGLLAGALVTGVLMAIFMSNAGGAWDNAKKFI ESGAEGGKNSPAHHAAVVGDTVGDPFKDTSGPALNILVKLITVVSVVCAGLFI >gi|325481887|gb|AEXN01000001.1| GENE 6 6900 - 7616 465 238 aa, chain + ## HITS:1 COG:no KEGG:Apre_1445 NR:ns ## KEGG: Apre_1445 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 238 1 238 238 336 93.0 4e-91 MEKIKQIQKKFQINGAVLKYIAFISMFIDHFNKAIITPYLNYQQPLVAISTIFDIIGRIA FPIFAFMIVEGFYKTKSRGKYLRNLLIFAIISEIPYDMFQSKVFINNRSQNIMWALALGL LTLIIVDKLKEKIKNKYTWLILSILIVGINAIIATLLSFDYDYYSIIIIFILYLFYDKRL VGSLISYLVIIKEVYAILGFAVINFYNGEKGRQNKLFNYLFYPIHLLILGLCRFWLGI >gi|325481887|gb|AEXN01000001.1| GENE 7 7817 - 8767 1037 316 aa, chain - ## HITS:1 COG:PH0144 KEGG:ns NR:ns ## COG: PH0144 COG0598 # Protein_GI_number: 14590086 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Pyrococcus horikoshii # 9 313 14 319 323 85 22.0 8e-17 MEYIYKFDTDNGFEMTDISSFYDVIEDDDFYLMYLGKASFIDFAKTYNLDDAIIDLLLSD TAKKSYMAVEDNYTFAILEMLDIMGNLETSDLIRFYIENNRLIIVDMYDRDQSTTEAFRK MLTKKFSARSPGRLLKYFITALVNNHTRIFNQIKNSTAEVEDAIIKNRNFRNSIEVISDN RHKALNLYASYERLLDTLEVFMENENEIFDDDDIKHLKSVLFRVERYSSNISYLSGYITN VKDSYTSKMDLSMNNTMKVLTVVTTIFTPITIITGWYGMNFENMPELKWNFGYMYVIGIS LISVLLVYLLFKKFDR >gi|325481887|gb|AEXN01000001.1| GENE 8 8876 - 9508 657 210 aa, chain - ## HITS:1 COG:no KEGG:Apre_0193 NR:ns ## KEGG: Apre_0193 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 209 1 209 210 96 37.0 5e-19 MKALIYKDLISIKKALILQFVIIIGLGLYFYKENQLVLIPLFFILVPVILLGMVFGIDNQ YSTNKYLVSSGISRKKIVISRYLIILFMAFFAIGLSFVVGFDKNPLTKEIPMLLILSSLF FVTSIVGVIELPLMYKFGAEKARLVFVILYFVVFAFFSTISSNKEWLLEYVNKGLSMDKT LLALLIFAITIIFHLLSIFSSIKIFENKDF >gi|325481887|gb|AEXN01000001.1| GENE 9 9489 - 10355 874 288 aa, chain - ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 277 1 281 288 193 38.0 4e-49 MNDILKIKSLSKSLNDFYLGTIDLSIKRGSILGYIGENGAGKSTTIKMILGDMKKDSGQI YIFGKKIEDLTEDEKKKIAFVFEDFFFPQEMNVKEVEKFHSMYYGNYWEKEKFNKLVKRF NLPEKKKISTFSRGMKMKLSLILALSHKAELLILDEATSGLDPVARDDILDILLEFIQDE NNSIMISSHILSDLEKIADEIAFIHRGKLIFVESKDILEEEYGIVSLSKEEFKSLDKNAI ISVRDYKFGKECLVKKQLLPESLEVENASIEEIMVYMIKEKYNESLDI >gi|325481887|gb|AEXN01000001.1| GENE 10 10348 - 10725 441 125 aa, chain - ## HITS:1 COG:BH0651 KEGG:ns NR:ns ## COG: BH0651 COG1725 # Protein_GI_number: 15613214 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 123 1 123 123 93 52.0 1e-19 MDIKIKYSSKDPIYLQIKNQIRDAILNDEIEKDKALPSIRLLAKELRVSVATTKRAYDEL EKDGLINSVPGKGNFVKDQNPELIREKFSLKIEDHLREVIKLSKLAGISKKEIISLIDIL EQDYE >gi|325481887|gb|AEXN01000001.1| GENE 11 10943 - 11413 541 156 aa, chain - ## HITS:1 COG:no KEGG:DvMF_0328 NR:ns ## KEGG: DvMF_0328 # Name: not_defined # Def: hypothetical protein # Organism: D.vulgaris_Miyazaki_F # Pathway: not_defined # 1 147 1 153 162 69 26.0 4e-11 MRSQFQPKDLLETLVKLEQNGQKFYEEMAKKFSDDKKNREFFEFLAEQETHHEVLYKNLS EKLDNNQSIDKEYDDEYKAYIQSMIDQIFNFDSSNVGDDPIDIYRFSIGIEKDTILFIKE VRTIVPDFEPELIDRVEAEERGHIKLIHQWYNDYIK >gi|325481887|gb|AEXN01000001.1| GENE 12 11423 - 12448 1391 341 aa, chain - ## HITS:1 COG:STM2550 KEGG:ns NR:ns ## COG: STM2550 COG2221 # Protein_GI_number: 16765870 # Func_class: C Energy production and conversion # Function: Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits # Organism: Salmonella typhimurium LT2 # 1 324 1 325 337 310 45.0 2e-84 MTLDINVGKVRNNCYRQSKIPGEFLLQLRSPGAFLDAKWLEMVQMLCQKYGDGNFHFGTR QTFNITGIKYEDIPKVNEIIKPYIEEIEGDRNVDIEYNDDGYPYIGPRNIMACIGGRHCI KAAQNTQRLADKLEKIIYESPYQIKTAVTGCPNDCVKAHFTDFGFVGVTRPVYDIDRCIG CGACVDRCKAVATRVLSLNDQGKVDKDPCCCVGCGECVTRCPNNAWRRPDRQMWNVIIGG RTGKQFPRMGQMFARWMDEDAVIQMMENWKDFSAYVLDNKPVYLHGGHLIDRVGFPTFKK MMLKDVDLNPECLIADRINWTEKEYRSSINVMKVEDHKNVK >gi|325481887|gb|AEXN01000001.1| GENE 13 12458 - 13291 1036 277 aa, chain - ## HITS:1 COG:STM2549 KEGG:ns NR:ns ## COG: STM2549 COG0543 # Protein_GI_number: 16765869 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Salmonella typhimurium LT2 # 17 277 14 272 272 279 49.0 4e-75 MQKNEIKRSTDDYLNYVLPKSYEILDIKKHTNNEWTFKVEFDKKVEPGQFLQVSLVKIGE APISVSGMGEGYVEMTIRNVGEVTSELFKSVPGDRIYLRGPYGNGWPVDELKGKNVVVIA GGTGVSPVKGLIEYIKENPDEFESLNLILGFKNHESVLFKENLEDWKNQEKISTVYSLDN EEVDGFKKGMVTAFIPDLPLKSFDGNYAVVMVGPPIMMKFTSLALIKEGVTEDKIWTSFE RKMSCAVGKCGHCRINETYVCLDGPVFPYTVAKDLLD >gi|325481887|gb|AEXN01000001.1| GENE 14 13291 - 14331 1312 346 aa, chain - ## HITS:1 COG:CAC1513 KEGG:ns NR:ns ## COG: CAC1513 COG1145 # Protein_GI_number: 15894791 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Clostridium acetobutylicum # 6 341 3 334 338 258 42.0 2e-68 MAYTDYLIKKDEAKDLFEILKSKYTIFAPKRIVNGGRYCEMDAIMYENVQSFDEIEYKEK STYSAKEALLPMTENLFYFTEDDYTETKEPYKKEVLVFARACDINAIKHLDDIFIKNGPF EDMFYQRRKNKVHYALLECQSDIDEHCFCVSCDANKTDNYTYAFRFNEDGSMNIKAEDDL DLSVFSNEKFDLKFPEENELKVTFPEIKDDREANLIANSDIWNEYNSRCIGCGSCTTSCS TCTCFTTRDVTYTLNRRVGERRRTNASCMTKDFDLVAGGGHFRNQLKERYRYKIMHKIYA HNKRFGDGPMCVGCGRCSAHCPQLISYPETINKVSKELEKVRSEVK >gi|325481887|gb|AEXN01000001.1| GENE 15 14624 - 15118 655 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695928|ref|ZP_03304056.1| ## NR: gi|212695928|ref|ZP_03304056.1| hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00461 [Anaerococcus hydrogenalis DSM 7454] # 1 164 1 164 164 159 98.0 6e-38 MKKKILLILALSLTLSACKKDQYVSQRHPDENKSNPVSTSVSYQEEKNKENKIVSSDSKK ASLEKVDDKNKSNEKKEDKKETKKEVKKEEKTENKDEEVKEAVGTFTVKDISNIRRETNE ESEIVATIQPGVEVERSEIDGKWSKVSYDQYQGYILTELLTDIQ >gi|325481887|gb|AEXN01000001.1| GENE 16 15196 - 15729 735 177 aa, chain - ## HITS:1 COG:no KEGG:Thebr_1590 NR:ns ## KEGG: Thebr_1590 # Name: not_defined # Def: capsular exopolysaccharide family (EC:2.7.10.2) # Organism: T.brockii # Pathway: not_defined # 11 167 18 176 235 69 27.0 4e-11 MFSKKTDHVEKSFEILKKNFLKVTEKNSLVQFVSSNEKINKASLILNLARSLSKDNYKVI IVEADFRDPELGELCDIDFDRGFFDILEKEKPYENFIVKDHFYENLDLILAPKQRDDVHS IMNYERVESIFSSLKEKYDYVFLDTANNENYDDANFYPSLSDFVIVLAHKKDFRKKD >gi|325481887|gb|AEXN01000001.1| GENE 17 15722 - 16612 1166 296 aa, chain - ## HITS:1 COG:no KEGG:Apre_0247 NR:ns ## KEGG: Apre_0247 # Name: not_defined # Def: lipopolysaccharide biosynthesis protein # Organism: A.prevotii # Pathway: not_defined # 1 296 1 312 312 119 31.0 1e-25 MKKKESIFIVIQKALIFGIIVGIGFYFLSDRLGLKTYKAQAKILTTSNEKIKDQDKTTYT YAETVKSNAIKKRVIENLKLNISEDELDKKMQIQAIPNTHILNINVEDSVKLRAEDIADE YAEITVSVINQLYQANSLIIDHAYPNAALVKTSQKDAMKVGLAGFLTYFIFGSLMLFIRN SKVEENEKIVEEKVVRKVVFEDKDKEDYQYDNLHEEFVEDQNNGDTFVKEYHVAEKIEDE NPEVIEDDIDYDESFKYVESSDEDEEELGVYENKENNKDYTIIADMPKYDDGDLDV >gi|325481887|gb|AEXN01000001.1| GENE 18 16614 - 17393 707 259 aa, chain - ## HITS:1 COG:no KEGG:Apre_0246 NR:ns ## KEGG: Apre_0246 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 259 1 259 259 324 63.0 3e-87 MKIEVLVSTMGQKSIDFYKKLNIKSDCLIINQTDHESYEEVYDKENKIRMISTKTRGLGR SRNLGLLNSKADVIVLCDDDEVFEDDYVEKIESEFKDHPHTDFLIMKTIIYQDNKEIIKV KNDGELKFFNSLKYGSVHFAFKRERVQKYNMSFSTYFGAGTENGSGEDSLFIRDGFKNKL KFRTSTKLIAKVYNDDSTWFIGYDEKMFFDKGQLARALFPKLYRLYIEYYLKNHEKFMEN IDKKTARKKMLEGAKYFGG >gi|325481887|gb|AEXN01000001.1| GENE 19 17395 - 18405 896 336 aa, chain - ## HITS:1 COG:MA2462 KEGG:ns NR:ns ## COG: MA2462 COG1215 # Protein_GI_number: 20091293 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Methanosarcina acetivorans str.C2A # 1 241 53 293 411 87 28.0 3e-17 MVISAYNEEKVIEKKLENIIKSDYENLEIIIANDCSDDRTVEICEKFIKNHPEFDIKVNT AKDHFGKTNAQNEAVDVASGEIIVFSDANSMFKEDAIKELVSFFTADDIEYVCGSLIYKK DGQISSVVAENTYWDLELKMREIESKISTIAAGNGAIYACRKKDYRHYNLVSSHDYEMPL HAGLNKKRALYNKDAIAVEKAGATTKDEFKRKVRMQRRILTNIFTNLKRLNIFKYGWFAF FHFNHKTLRFLQAFFHILIFVANIFLIKSGIFYQITMIGQILFYILALLGYLSKSKAKIL YFPLYYSLMMLAQIKGAYNQISGKSKATWEKAESTR >gi|325481887|gb|AEXN01000001.1| GENE 20 18357 - 18539 111 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695924|ref|ZP_03304052.1| ## NR: gi|212695924|ref|ZP_03304052.1| hypothetical protein ANHYDRO_00457 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00457 [Anaerococcus hydrogenalis DSM 7454] # 1 36 1 36 381 63 94.0 4e-09 MKILFWISAFALFYAMVGYPLTLIILDKILKKKIKKIILISQRYLWLYLLITKKKSLRKN >gi|325481887|gb|AEXN01000001.1| GENE 21 18651 - 19535 964 294 aa, chain - ## HITS:1 COG:L58643 KEGG:ns NR:ns ## COG: L58643 COG1968 # Protein_GI_number: 15674174 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Lactococcus lactis # 3 289 1 276 284 214 41.0 1e-55 MILDLLKVFILSIVEGVTEFLPVSSTGHLILVNEFVKLEPEKFANAFNVIIQLGAILSVV VLYFRKLNPWDLEKTKKYFPKNYDKLNGQSKIYYRLSHPHKETMDLWKRVIIGVIPAGVL GLLLDDIIDAYLFNPMVVALMLFVWGIGIILLEKKNKNENRQRVDNLSLISYKTAFLIGC FQVLAMIPGTSRSAATIIGAMILGLSRSASAEFSFFLAIPTMLGATLLKVVKNVSGFSGY EWILILIGMILSFIVAYIVIKKFISYVQKNDFIIFGKYRIILSIIVFLYFLIIK >gi|325481887|gb|AEXN01000001.1| GENE 22 19678 - 20340 861 220 aa, chain - ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 5 220 21 235 277 198 43.0 5e-51 MELVEIERSIIKKYRKEIWSKFVKAVKKYELINEGDKVACAISGGKDSLLTAKLVEELHK HSNVNFEVEYICMDPGYDKENRDLLEKNLKYLNIPAKIFDSDVFEISEKISGDYPCYMCA RMRRGFLYAKAKELGCNKVALGHHMNDAVETTLMNVLYAGNYKTMKPKLMAQNFDNMELI RPMYFIEEKDVIAWRDYVGLDALNCACTVTKKSESYTRKK >gi|325481887|gb|AEXN01000001.1| GENE 23 20340 - 21131 740 263 aa, chain - ## HITS:1 COG:CAC3538 KEGG:ns NR:ns ## COG: CAC3538 COG1235 # Protein_GI_number: 15896774 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Clostridium acetobutylicum # 3 263 2 261 261 229 45.0 3e-60 MSRFCSLASGSSGNSVFVEHKGSKILIDCGFSGRKIENLLSQIGENPSDLDAIFLTHEHM DHVKGAGVISRRYDIPIYANKGTWLSFIKNAGKLKEENIKIFRSNSFLNFNSFDIFPISI HHDANEPVGFILYLDNKKITVLTDTGIIDDRILNEIKGSDVYYFEANHDLDALKRGPYTY PMKVRIMGKMGHLSNDQSAKILADALQGKNEKIFLAHLSETNNSEELCKITVDNYLKSCG LDTSRDIKLEVAKRHAPSSIVEL >gi|325481887|gb|AEXN01000001.1| GENE 24 21242 - 22057 945 271 aa, chain - ## HITS:1 COG:SP1291 KEGG:ns NR:ns ## COG: SP1291 COG0561 # Protein_GI_number: 15901151 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pneumoniae TIGR4 # 4 264 2 263 268 132 29.0 9e-31 MNNNIKLVAIDLDGTLLNSDKKVSRKNIETIRKLRDKGIYITIATGRPVGGFSWILDDLS LVSHDDYSITNTGSLIIKNMDKSDISKEVLSMDDYFKLKNMINDKMQIGIYNKYNLYSNS EKINEHFAFESKILKMPIEKFDESNKNQSVDRISITGDGEVLDIFEKNYNKKLLETYQTV RNVPEVFEVLNKKADKGQALQRLCSYLNIDIKNTLTIGDSNNDKTMLSISGLSATCQNGR ESVKEMVDIVSPYSNDQDGVSNILEKIFFDK >gi|325481887|gb|AEXN01000001.1| GENE 25 22129 - 23424 1135 431 aa, chain - ## HITS:1 COG:BH1152 KEGG:ns NR:ns ## COG: BH1152 COG0635 # Protein_GI_number: 15613715 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus halodurans # 53 429 79 493 498 221 35.0 1e-57 MKIYLENENLRKIVYDILNIFYDKKDFSFVGENEDISIKNGLVTTKDKSYFFDSNLKLKE ILFEIFKDELKKSPPWGILTGSKPSKLLKNHSLEDLKNIYKVSDEKINLLKSVKESQDRL KFNPNSFNLYINIPFCPQRCKYCSYPTIVSNIVDKNQYVDFLLKEIKGINLDKKLDTIYL GGGTPSNLPLKDLDRILSLVNEKFTFDEFTLEAGREDTLDFEKLDLFKEKNVGRISLNPQ TFSKNVLENVNRPIDFENFIKIYQYAKDLGFVINMDFIIGLFGENRESFRKNFEILKDLK PDNLTFHALAQKVGSKYFEENINGDINEAIKISKDIEKFTKENSYKPYYLYRQKNIIGNL ENGGYEKGNTAQRYNILINEELENIIGLGMNANSKLMNGKKYRNERNLRDYYENIEKEIS DKNKLIENFMP >gi|325481887|gb|AEXN01000001.1| GENE 26 23421 - 23978 476 185 aa, chain - ## HITS:1 COG:no KEGG:Apre_0314 NR:ns ## KEGG: Apre_0314 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 185 25 211 212 118 38.0 1e-25 MPTAVFSINDKEFLENIGLVECPSCKKLFKLNYRYVYTDNDKKLMFVNDPKFAQKRNQLA FKSSLKLLDKFNKNEAGDFLIRMCQDDKDLKEKISIFNDGKIDNIVEIMKLVLIQSPDFK FDRESILKIYYKDNEFIINTKEGKFKMPFIDDLYESLYEKYIPFIDIKNTEMIDQNWARK IVKEI >gi|325481887|gb|AEXN01000001.1| GENE 27 24041 - 24697 876 218 aa, chain - ## HITS:1 COG:CAC0855 KEGG:ns NR:ns ## COG: CAC0855 COG0637 # Protein_GI_number: 15894142 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 208 1 206 212 100 31.0 3e-21 MDYFVFDMDGTLFDTEKIYYNTWIEISKIEGFHFDINDKLNLSGKQDKEAIDYMIENFSM DYDKAIRVRKDLNALRDKRFSEIDYCIKKPGLIDLLTYLKGNEKKIALASSSSRKRIDFF LDKEGVRDYFEKIVSSDDITKGKPDPEIFNLAMEKLGADKDKTYVIEDSLAGVKAAKASG AKVVLIIDLDDSDLIKSQADLVFSSLDEFLEYIKKIQK >gi|325481887|gb|AEXN01000001.1| GENE 28 24699 - 25145 697 148 aa, chain - ## HITS:1 COG:SA0649 KEGG:ns NR:ns ## COG: SA0649 COG1661 # Protein_GI_number: 15926371 # Func_class: R General function prediction only # Function: Predicted DNA-binding protein with PD1-like DNA-binding motif # Organism: Staphylococcus aureus N315 # 1 147 1 138 140 82 32.0 3e-16 MVYKRFGDKLVIRLKKGDKLVESVREILERENVKAGFLTGIGATDNLEVGLFDPKTKEYN IKKYEEDLEIANLCGNISNKDGKLYTHFHITCGRVEDNAQKGQIPGSAIGGHLNEAIISL TAEIFVTIIDGDINRLYDEDLGLNLIEF Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:15:25 2011 Seq name: gi|325481747|gb|AEXN01000002.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00036, whole genome shotgun sequence Length of sequence - 144088 bp Number of predicted genes - 143, with homology - 139 Number of transcription units - 64, operones - 37 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 83 - 116 2.0 1 1 Tu 1 . - CDS 213 - 755 719 ## Apre_0313 hypothetical protein - Prom 934 - 993 7.9 + Prom 889 - 948 11.1 2 2 Op 1 . + CDS 974 - 1630 981 ## Apre_0312 hypothetical protein 3 2 Op 2 . + CDS 1682 - 2254 533 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 4 2 Op 3 . + CDS 2302 - 2592 460 ## FMG_0916 hypothetical protein 5 3 Op 1 9/0.000 - CDS 2704 - 3927 1430 ## COG1668 ABC-type Na+ efflux pump, permease component 6 3 Op 2 . - CDS 3920 - 4810 259 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 7 3 Op 3 . - CDS 4884 - 5396 485 ## Apre_0310 hypothetical protein 8 3 Op 4 . - CDS 5393 - 6253 891 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 6329 - 6388 12.7 - Term 7244 - 7278 1.1 9 4 Tu 1 . - CDS 7285 - 8448 1426 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 8656 - 8715 15.8 + Prom 8655 - 8714 11.4 10 5 Op 1 . + CDS 8743 - 9108 482 ## COG3641 Predicted membrane protein, putative toxin regulator 11 5 Op 2 . + CDS 9116 - 9766 642 ## COG3641 Predicted membrane protein, putative toxin regulator + Prom 9775 - 9834 12.5 12 6 Op 1 . + CDS 9860 - 11311 1155 ## CPF_1016 putative type II restriction endonuclease 13 6 Op 2 . + CDS 11371 - 12675 1138 ## COG0270 Site-specific DNA methylase + Term 12700 - 12747 13.1 - Term 12694 - 12729 5.3 14 7 Op 1 . - CDS 12746 - 12946 259 ## 15 7 Op 2 . - CDS 12950 - 13126 272 ## gi|325845965|ref|ZP_08169163.1| hypothetical protein HMPREF9246_1539 - Prom 13219 - 13278 7.1 - Term 13353 - 13377 -1.0 16 8 Tu 1 . - CDS 13394 - 14395 1237 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 14423 - 14482 5.6 - Term 14397 - 14430 1.2 17 9 Op 1 6/0.000 - CDS 14486 - 15010 546 ## COG3688 Predicted RNA-binding protein containing a PIN domain 18 9 Op 2 7/0.000 - CDS 14997 - 15710 443 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 19 9 Op 3 . - CDS 15710 - 16570 1011 ## COG0215 Cysteinyl-tRNA synthetase 20 9 Op 4 1/0.000 - CDS 16495 - 17127 910 ## COG0215 Cysteinyl-tRNA synthetase 21 9 Op 5 . - CDS 17129 - 18610 2001 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 18855 - 18914 10.4 + Prom 18785 - 18844 9.0 22 10 Op 1 . + CDS 18915 - 19595 519 ## gi|325845882|ref|ZP_08169080.1| conserved domain protein 23 10 Op 2 . + CDS 19595 - 20170 548 ## Tlet_0550 ABC transporter related - Term 19909 - 19945 3.1 24 11 Op 1 . - CDS 20167 - 21048 1200 ## COG1032 Fe-S oxidoreductase 25 11 Op 2 . - CDS 21053 - 22063 1395 ## COG2008 Threonine aldolase - Prom 22277 - 22336 8.6 - Term 22213 - 22247 3.0 26 12 Op 1 . - CDS 22439 - 24511 2459 ## COG2217 Cation transport ATPase 27 12 Op 2 . - CDS 24513 - 24854 674 ## gi|212696930|ref|ZP_03305058.1| hypothetical protein ANHYDRO_01493 - Prom 24887 - 24946 9.3 28 13 Op 1 . - CDS 24979 - 25227 136 ## gi|325845879|ref|ZP_08169077.1| hypothetical protein HMPREF9246_1552 29 13 Op 2 22/0.000 - CDS 25252 - 27402 2838 ## COG0370 Fe2+ transport system protein B 30 13 Op 3 . - CDS 27403 - 27627 323 ## COG1918 Fe2+ transport system protein A 31 13 Op 4 . - CDS 27627 - 27848 248 ## Apre_1460 FeoA family protein - Prom 27879 - 27938 8.9 - Term 28754 - 28801 1.8 32 14 Tu 1 . - CDS 28984 - 29850 935 ## COG1307 Uncharacterized protein conserved in bacteria - Prom 29953 - 30012 12.3 33 15 Tu 1 . - CDS 30083 - 31600 1757 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 31625 - 31684 6.7 - Term 31993 - 32044 0.0 34 16 Tu 1 . - CDS 32121 - 32633 745 ## COG0628 Predicted permease - Prom 32672 - 32731 8.9 + Prom 32621 - 32680 10.0 35 17 Tu 1 . + CDS 32721 - 33767 1077 ## EF1030 endonuclease/exonuclease/phosphatase family protein + Term 33775 - 33824 9.2 - Term 33765 - 33809 11.1 36 18 Tu 1 . - CDS 33816 - 34595 976 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 34651 - 34710 9.9 - Term 34661 - 34702 5.8 37 19 Tu 1 . - CDS 34712 - 35224 400 ## COG0778 Nitroreductase - Prom 35253 - 35312 3.2 + Prom 35552 - 35611 5.5 38 20 Tu 1 . + CDS 35827 - 35931 73 ## - Term 36513 - 36556 1.9 39 21 Op 1 13/0.000 - CDS 36660 - 36941 311 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 40 21 Op 2 12/0.000 - CDS 36941 - 37939 730 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 41 21 Op 3 6/0.000 - CDS 37948 - 38433 421 ## COG1468 RecB family exonuclease 42 21 Op 4 . - CDS 38430 - 40952 2063 ## COG1203 Predicted helicases 43 21 Op 5 . - CDS 40942 - 41679 802 ## CTC01466 hypothetical protein 44 21 Op 6 . - CDS 41681 - 42634 1076 ## CTC01467 hypothetical protein 45 21 Op 7 . - CDS 42621 - 44390 1460 ## CTC01468 hypothetical protein 46 21 Op 8 . - CDS 44402 - 45088 591 ## ELI_0133 CRISPR-associated protein Cas6 - Prom 45194 - 45253 9.2 - Term 45256 - 45294 6.7 47 22 Op 1 1/0.000 - CDS 45302 - 47035 2368 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 48 22 Op 2 23/0.000 - CDS 47045 - 48625 2087 ## COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 49 22 Op 3 . - CDS 48612 - 49115 634 ## COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit - Prom 49229 - 49288 13.2 + Prom 49294 - 49353 13.2 50 23 Op 1 12/0.000 + CDS 49541 - 49924 470 ## COG0853 Aspartate 1-decarboxylase 51 23 Op 2 . + CDS 49983 - 50822 1065 ## COG0414 Panthothenate synthetase 52 23 Op 3 . + CDS 50825 - 51781 1457 ## COG0385 Predicted Na+-dependent transporter + Term 51791 - 51830 5.1 - Term 51777 - 51818 7.1 53 24 Tu 1 . - CDS 51823 - 53043 1212 ## COG2379 Putative glycerate kinase - Prom 53081 - 53140 6.8 - Term 53090 - 53135 12.2 54 25 Op 1 2/0.000 - CDS 53142 - 54815 2438 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 55 25 Op 2 1/0.000 - CDS 54825 - 56096 1289 ## COG2610 H+/gluconate symporter and related permeases - Prom 56140 - 56199 11.1 - Term 56111 - 56157 -0.3 56 25 Op 3 . - CDS 56219 - 57868 1569 ## COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - Prom 57927 - 57986 5.9 - Term 57925 - 57987 5.2 57 26 Op 1 . - CDS 57992 - 59356 1388 ## COG2461 Uncharacterized conserved protein - Prom 59383 - 59442 5.0 58 26 Op 2 . - CDS 59444 - 60142 535 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 59 26 Op 3 . - CDS 60223 - 60297 93 ## - Prom 60447 - 60506 6.4 + Prom 60221 - 60280 11.2 60 27 Tu 1 . + CDS 60514 - 61152 451 ## COG1396 Predicted transcriptional regulators - Term 61204 - 61247 6.0 61 28 Tu 1 . - CDS 61307 - 62161 988 ## COG1307 Uncharacterized protein conserved in bacteria - Term 62176 - 62225 7.2 62 29 Op 1 . - CDS 62238 - 62927 967 ## COG0588 Phosphoglycerate mutase 1 63 29 Op 2 . - CDS 62927 - 63976 1302 ## COG1077 Actin-like ATPase involved in cell morphogenesis 64 29 Op 3 . - CDS 63985 - 65154 1660 ## COG0192 S-adenosylmethionine synthetase - Prom 65175 - 65234 6.8 65 30 Op 1 19/0.000 - CDS 65331 - 65678 467 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 66 30 Op 2 4/0.000 - CDS 65679 - 66368 288 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 67 30 Op 3 . - CDS 66370 - 67479 788 ## PROTEIN SUPPORTED gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 68 30 Op 4 . - CDS 67491 - 67970 647 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD - Prom 67990 - 68049 11.9 69 31 Tu 1 . - CDS 68052 - 68990 1089 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 69069 - 69128 10.5 + Prom 69055 - 69114 12.3 70 32 Tu 1 . + CDS 69147 - 69695 569 ## COG3859 Predicted membrane protein + Term 69708 - 69748 7.3 - Term 69694 - 69736 6.1 71 33 Tu 1 . - CDS 69928 - 70659 904 ## COG1482 Phosphomannose isomerase - Term 70679 - 70724 7.8 72 34 Op 1 . - CDS 70725 - 71537 921 ## Apre_0171 hypothetical protein 73 34 Op 2 8/0.000 - CDS 71530 - 72219 212 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 74 34 Op 3 . - CDS 72219 - 72578 337 ## COG1725 Predicted transcriptional regulators 75 34 Op 4 . - CDS 72579 - 72842 322 ## gi|325845855|ref|ZP_08169053.1| hypothetical protein HMPREF9246_1597 - Prom 72882 - 72941 8.7 - Term 73498 - 73535 7.3 76 35 Op 1 . - CDS 73547 - 74620 1552 ## COG3595 Uncharacterized conserved protein 77 35 Op 2 . - CDS 74613 - 74969 415 ## COG3877 Uncharacterized protein conserved in bacteria - Prom 75019 - 75078 10.6 78 36 Op 1 . - CDS 75153 - 75845 552 ## Apre_0161 hypothetical protein 79 36 Op 2 25/0.000 - CDS 75842 - 76849 1018 ## COG0438 Glycosyltransferase 80 36 Op 3 . - CDS 76846 - 77985 1115 ## COG0438 Glycosyltransferase - Prom 78073 - 78132 8.8 + Prom 78030 - 78089 9.6 81 37 Tu 1 . + CDS 78120 - 78491 239 ## Apre_0158 hypothetical protein + Term 78496 - 78536 5.2 - Term 78483 - 78522 -0.4 82 38 Tu 1 . - CDS 78526 - 78975 518 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 79010 - 79069 10.5 - Term 79026 - 79067 6.1 83 39 Op 1 9/0.000 - CDS 79080 - 79961 1376 ## COG1760 L-serine deaminase 84 39 Op 2 1/0.000 - CDS 79965 - 80621 985 ## COG1760 L-serine deaminase 85 39 Op 3 . - CDS 80621 - 81268 705 ## COG0546 Predicted phosphatases - Prom 81326 - 81385 9.2 + Prom 81244 - 81303 7.9 86 40 Op 1 . + CDS 81387 - 82829 1666 ## COG1488 Nicotinic acid phosphoribosyltransferase 87 40 Op 2 . + CDS 82829 - 83572 835 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Term 83593 - 83645 11.2 - Term 83588 - 83626 5.1 88 41 Op 1 16/0.000 - CDS 83671 - 84606 1610 ## COG1879 ABC-type sugar transport system, periplasmic component 89 41 Op 2 21/0.000 - CDS 84616 - 85560 1226 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 90 41 Op 3 9/0.000 - CDS 85557 - 87038 206 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 91 41 Op 4 6/0.000 - CDS 87048 - 87440 470 ## COG1869 ABC-type ribose transport system, auxiliary component 92 41 Op 5 13/0.000 - CDS 87437 - 88330 1000 ## COG0524 Sugar kinases, ribokinase family 93 41 Op 6 2/0.000 - CDS 88317 - 89318 836 ## COG1609 Transcriptional regulators - Prom 89388 - 89447 7.7 - Term 89507 - 89545 0.7 94 41 Op 7 . - CDS 89624 - 90259 483 ## COG2801 Transposase and inactivated derivatives 95 41 Op 8 . - CDS 90354 - 91733 1360 ## COG0531 Amino acid transporters 96 41 Op 9 . - CDS 91763 - 92989 1487 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities + Prom 92969 - 93028 5.9 97 42 Tu 1 . + CDS 93207 - 93917 555 ## HMPREF0868_0216 DNA-binding helix-turn-helix protein + Term 93979 - 94020 2.0 98 43 Tu 1 . - CDS 94239 - 94943 502 ## COG3666 Transposase and inactivated derivatives - Prom 95053 - 95112 3.4 99 44 Op 1 . - CDS 95501 - 96874 1706 ## COG1066 Predicted ATP-dependent serine protease 100 44 Op 2 . - CDS 96861 - 98177 1500 ## COG3572 Gamma-glutamylcysteine synthetase - Prom 98305 - 98364 9.6 + Prom 98099 - 98158 6.8 101 45 Op 1 . + CDS 98340 - 99011 652 ## gi|325845979|ref|ZP_08169177.1| putative lipoprotein 102 45 Op 2 . + CDS 99023 - 99742 826 ## Bfae_30500 hypothetical protein + Term 99747 - 99773 1.0 - Term 99729 - 99768 6.4 103 46 Op 1 . - CDS 99769 - 100215 695 ## FN1065 hypothetical protein 104 46 Op 2 . - CDS 100218 - 100985 1093 ## CbC4_0319 hypothetical protein 105 46 Op 3 . - CDS 100982 - 102175 1764 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase + Prom 102225 - 102284 10.4 106 47 Op 1 . + CDS 102309 - 103313 1241 ## Bfae_30500 hypothetical protein 107 47 Op 2 . + CDS 103313 - 103756 479 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Term 103779 - 103814 4.0 - Term 103855 - 103905 7.1 108 48 Op 1 . - CDS 103925 - 105013 1603 ## FMG_1107 hypothetical protein 109 48 Op 2 . - CDS 105024 - 106235 1324 ## FMG_1108 hypothetical protein - Prom 106263 - 106322 6.0 110 48 Op 3 . - CDS 106330 - 109116 2935 ## COG4870 Cysteine protease - Prom 109327 - 109386 16.1 + Prom 109217 - 109276 14.5 111 49 Tu 1 . + CDS 109403 - 112162 2544 ## COG4870 Cysteine protease + Term 112190 - 112234 7.6 - Term 112171 - 112228 15.6 112 50 Op 1 . - CDS 112239 - 112331 83 ## 113 50 Op 2 . - CDS 112331 - 113236 1097 ## COG0673 Predicted dehydrogenases and related proteins 114 50 Op 3 . - CDS 113229 - 113855 329 ## gi|325845912|ref|ZP_08169110.1| hypothetical protein HMPREF9246_1635 - Prom 114006 - 114065 10.9 + Prom 113894 - 113953 7.3 115 51 Tu 1 . + CDS 113994 - 114359 139 ## gi|325845853|ref|ZP_08169051.1| hypothetical protein HMPREF9246_1636 + Term 114492 - 114549 10.3 + Prom 114718 - 114777 11.5 116 52 Op 1 . + CDS 114931 - 115635 1001 ## Apre_0499 YodA domain-containing protein + Term 115643 - 115674 2.7 117 52 Op 2 25/0.000 + CDS 115681 - 117021 1334 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 118 52 Op 3 42/0.000 + CDS 116999 - 117670 298 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 119 52 Op 4 . + CDS 117664 - 118464 1037 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 118469 - 118515 13.1 + Prom 118569 - 118628 12.1 120 53 Op 1 . + CDS 118665 - 119639 1406 ## gi|325845918|ref|ZP_08169116.1| hypothetical protein HMPREF9246_1641 121 53 Op 2 . + CDS 119649 - 120371 779 ## gi|325845909|ref|ZP_08169107.1| putative lipoprotein + Term 120383 - 120427 2.8 - Term 120366 - 120420 11.7 122 54 Op 1 . - CDS 120447 - 122189 2061 ## COG0003 Oxyanion-translocating ATPase 123 54 Op 2 . - CDS 122208 - 122576 472 ## CLM_0906 arsenical resistence operon repressor ArsD - Prom 122599 - 122658 7.1 124 54 Op 3 . - CDS 122661 - 122975 460 ## COG0640 Predicted transcriptional regulators - Prom 123051 - 123110 7.3 - Term 123077 - 123117 -0.2 125 55 Op 1 5/0.000 - CDS 123305 - 125716 1926 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 126 55 Op 2 7/0.000 - CDS 125716 - 126684 1050 ## COG3869 Arginine kinase 127 55 Op 3 5/0.000 - CDS 126681 - 127256 618 ## COG3880 Uncharacterized protein with conserved CXXC pairs 128 55 Op 4 . - CDS 127261 - 127725 212 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 - Prom 127777 - 127836 10.8 129 56 Tu 1 . - CDS 128128 - 128814 857 ## COG2738 Predicted Zn-dependent protease - Prom 128870 - 128929 9.8 - Term 129192 - 129228 4.3 130 57 Op 1 17/0.000 - CDS 129418 - 130083 974 ## COG0569 K+ transport systems, NAD-binding component 131 57 Op 2 . - CDS 130093 - 131460 1663 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 131582 - 131641 10.6 + Prom 131527 - 131586 9.9 132 58 Tu 1 . + CDS 131616 - 132119 552 ## COG4894 Uncharacterized conserved protein + Term 132221 - 132270 9.0 + Prom 132127 - 132186 5.1 133 59 Tu 1 . + CDS 132289 - 134964 3343 ## COG0474 Cation transport ATPase + Term 134980 - 135011 1.1 + Prom 135088 - 135147 6.2 134 60 Tu 1 . + CDS 135182 - 135469 355 ## Apre_1529 hypothetical protein + Term 135480 - 135511 -0.7 - Term 135468 - 135499 -0.7 135 61 Op 1 7/0.000 - CDS 135515 - 136075 643 ## COG2059 Chromate transport protein ChrA 136 61 Op 2 . - CDS 136068 - 136601 580 ## COG2059 Chromate transport protein ChrA - Prom 136718 - 136777 8.5 + Prom 136631 - 136690 9.7 137 62 Op 1 . + CDS 136716 - 137255 669 ## SSA_1110 hypothetical protein 138 62 Op 2 . + CDS 137272 - 137925 807 ## COG0637 Predicted phosphatase/phosphohexomutase 139 63 Tu 1 . - CDS 138226 - 139587 1395 ## COG0534 Na+-driven multidrug efflux pump - Prom 139666 - 139725 12.2 - Term 139920 - 139985 16.7 140 64 Op 1 2/0.000 - CDS 140096 - 141475 1894 ## COG2610 H+/gluconate symporter and related permeases 141 64 Op 2 3/0.000 - CDS 141486 - 142478 410 ## PROTEIN SUPPORTED gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 142 64 Op 3 2/0.000 - CDS 142481 - 143761 1494 ## COG3395 Uncharacterized protein conserved in bacteria 143 64 Op 4 . - CDS 143780 - 144088 291 ## COG1349 Transcriptional regulators of sugar metabolism Predicted protein(s) >gi|325481747|gb|AEXN01000002.1| GENE 1 213 - 755 719 180 aa, chain - ## HITS:1 COG:no KEGG:Apre_0313 NR:ns ## KEGG: Apre_0313 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 180 5 181 181 164 58.0 2e-39 MNKLTTKKITYTGLFIALVFIFSAFFQIPLKTPMGDTRFHLGNVFCLLGGIILGPGLGGL AAGLGSAIFDLTNPLYFASAPFTFINKFMMGFVAGLVFHKVKMKNEKLRAALAGLCGQVT YIVLYLLYTFIKNKVAMGLSFEANMVEVVQKLGVSSINGIISVIVASIFAIAVAKRVKMD >gi|325481747|gb|AEXN01000002.1| GENE 2 974 - 1630 981 218 aa, chain + ## HITS:1 COG:no KEGG:Apre_0312 NR:ns ## KEGG: Apre_0312 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 218 1 219 221 236 54.0 7e-61 MSEFLGPIHYMMYDKIKFQDKITNFLLDGNTKEIDEKIAPVSTDNLENLIDQENIHGWLD SKIAVVENRLAFAIKNSQNTKEKLFEFGKKQAQGKNFSDYNEIFQDLNTMLLDGMPCDNG LSATIDENGDLFLITNVNTHEKYFKDFINPEDSLSNTCEGGHSHDHHEAFEINKNGFELK EEISPYHEYRYEFLKGYFENSPYGVDLVGGINYRIYKK >gi|325481747|gb|AEXN01000002.1| GENE 3 1682 - 2254 533 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 2 190 3 192 192 209 51 5e-53 MQIEKIIEKLKADPRNKTYTKRGIGPIFQFNKNAKILIIGQAPGKKVEESGILFNDKSGE NLVDWLGISMNTLHGENFSIIPMDFYYPGKDKSGDKAPRKFIAKEYHPLLLEELKNINLT ILIGAYAQKFYLKDDFKKNLTETVRNFKDYLPEYFPLVHPSPLNNRWMAKNKFFKEKNLP EIKKIIQEII >gi|325481747|gb|AEXN01000002.1| GENE 4 2302 - 2592 460 96 aa, chain + ## HITS:1 COG:no KEGG:FMG_0916 NR:ns ## KEGG: FMG_0916 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 95 1 95 95 137 82.0 1e-31 MKKLSANILDGKFEHLLDEDKLQITHLQIKQGEEVPSHKSDKSVVVVIYKGKVDFTGENK SEIIVPGNIITMEPNEMHALKAIEDSDLMVIKAKIQ >gi|325481747|gb|AEXN01000002.1| GENE 5 2704 - 3927 1430 407 aa, chain - ## HITS:1 COG:SP1716 KEGG:ns NR:ns ## COG: SP1716 COG1668 # Protein_GI_number: 15901550 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 393 1 386 399 175 29.0 1e-43 MNRFMTVSIDTLKKHLKSGAFWVMVLMPFIMAVIIGIVSYISYSTKTPDTIAIVSEEKYK KNFQNNPMVDFEFKEKNEAKKALDDKEISAYLEVKNKDGVLNFDYYGDTTAKTPMLVINS LAENMQRKENLKNSNIDAKQNAIISQKPQVKLHEIKDNLKNPGNMFALFATIFIMYFVLI FYSQIIMQDIAIEKGSKMLEFIFSSVKAGTYMAGKIFGTILAMLVHFGIYLILGLVGFAV IKFTGFYDKIRSMLDINISDLFKGINTNLVFEIVLFMVLGLILYIILSAMLGSLVQKQED AGKMATPIMLIIMFCYFISTSFVGSEPNLFIKILSYIPFLSTFFMPMRLIYENASLFQGM ISLVILLLGIILMYIVAARVYKKNILNYSTDKLFGRGKKLKIKKKNK >gi|325481747|gb|AEXN01000002.1| GENE 6 3920 - 4810 259 296 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 241 1 245 245 104 29 3e-21 MLKVERLKKSFGDLDALKKIDFEVKDGELFGVIGQNGAGKSTLFRCIMNFYSKYEGSITY NGKKFSKVPLEKIGFLPEERSLDPKRKVEDQIRYFAKLNKMRKISDQKLKEWFDYFEIDG KLSSKIKELSKGNQQKVQLLCALIYKPEFVILDEPFSGLDPYNIRLLEKIIKDVNKEGTT IMFSSHNMENVESLCKKLIMLKKGNIVLNGSPQEIRNSYERNKLVVESSEDLFFLNDENI EMISQDGDKWTFILKDEDYAKVIFKKIVDNIGFVPYFDQSPPTLNEIFARKVEENE >gi|325481747|gb|AEXN01000002.1| GENE 7 4884 - 5396 485 170 aa, chain - ## HITS:1 COG:no KEGG:Apre_0310 NR:ns ## KEGG: Apre_0310 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 161 1 160 165 134 45.0 2e-30 MKFKKPGQRIFKTSLAVFLAFTLSHFRSAHALPFYSAIAAIICTKNDVNGSINIGLNRIL GTFIGGFVGFLYLLFVKKNLTNEIEEYFLLSVIMAFLIWLVSSFEKPNAISIMCIVLASV SINHAGEDFGAIDFAVNRVLDTLVGVLVAILINSIDFEILKFIKYEKDKS >gi|325481747|gb|AEXN01000002.1| GENE 8 5393 - 6253 891 286 aa, chain - ## HITS:1 COG:mlr2009 KEGG:ns NR:ns ## COG: mlr2009 COG1957 # Protein_GI_number: 13471890 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Mesorhizobium loti # 1 194 1 199 324 73 24.0 5e-13 MEKEKPFVYIDTNFSLSEILMLKLAFNSNEFEIVGISSVNSFMDAKSAALNILSMTCMED LILPICGGSSFNLKNQEILTRGENSVIFDKEDDYLSEEDPEDFLYSLAKDCGRLDIIATG PLTNIGKAIEKYDDFVDYIDHIFILGSNFSSGDITKSSEFNFFTDPKAANIVLKENIDTF ILPIDLSNSLSLPDEILKENSSDPVLNKIKEIYKIYPKNERELKAAILLYMVVKPQAFIF EEKAIKVNEDFDRGAISEISSKNKKYVANRLNDQTFFDFLFDRLGV >gi|325481747|gb|AEXN01000002.1| GENE 9 7285 - 8448 1426 387 aa, chain - ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 3 384 2 393 394 253 37.0 5e-67 MTNYFKEAEELKDELVKNRRHIHENPELGLVLPQTKEFVIKNLKEVGAEIKEVGESGVQA TIKGEKGPGKRILIRADMDALPMDEESGLDFSSKNKGVAHTCGHDLHTSIGLISAKLLAK HKKDFKGEVRFMFQPAEEIFKGSKMMIEEGVLDGVDVALALHTNLTHEAGSVSYYEGYMA TSCDNFKVTIKGQGGHGGYPHTTKDPINAGVMIYQQFNQLISRDADPSKHTTLTFGQFSS GSNSNIIPDTAILQGTMRTYDPEIREKLLKRIDEIVEGVSKASECEVNLEYFASVPSLYS DPDLTKELVEYVEKSSDVEMISGERLMASEDMAFVSRKVPTVYFLLNSKVPGNNYSHHNP KVDFSEDAMPIGVGLFLTCAINWLNNN >gi|325481747|gb|AEXN01000002.1| GENE 10 8743 - 9108 482 121 aa, chain + ## HITS:1 COG:BH3254 KEGG:ns NR:ns ## COG: BH3254 COG3641 # Protein_GI_number: 15615816 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Bacillus halodurans # 1 107 1 106 336 74 48.0 4e-14 MKNFLKRKGISLSAKVYFIDALGSMAFGLFATLLVGTILNTIGNSFGIDFLSKTVWPLAQ EATGPAIAVSIAYALNADRLILFSSTIVGLAANKLGGPMGVFIATLFLCRNCKISFKRNK N >gi|325481747|gb|AEXN01000002.1| GENE 11 9116 - 9766 642 216 aa, chain + ## HITS:1 COG:BH3254 KEGG:ns NR:ns ## COG: BH3254 COG3641 # Protein_GI_number: 15615816 # Func_class: R General function prediction only # Function: Predicted membrane protein, putative toxin regulator # Organism: Bacillus halodurans # 1 215 124 336 336 195 53.0 5e-50 MTPIVTVLVGVMIANLVGPFIQTLMTKIGIIIMDATKQKPFIMGIIVSVIVGIVLTLPIS SAALCMTISLSGLAAGAATIGCCCQMIGFAVTSFKENKTQGLIAQGLGTSMLQMPNIMRN PKILIPPTLASAILGPVSTIVFKLENSPIGAGMGTCGLVGQISTFTAMNQVGFFKLLSVV ILMHIILPAIVSLIIYYFVRKIGWIKDGDMKLDFSK >gi|325481747|gb|AEXN01000002.1| GENE 12 9860 - 11311 1155 483 aa, chain + ## HITS:1 COG:no KEGG:CPF_1016 NR:ns ## KEGG: CPF_1016 # Name: not_defined # Def: putative type II restriction endonuclease # Organism: C.perfringens_ATCC13124 # Pathway: not_defined # 4 483 6 491 495 365 44.0 2e-99 MINYDENSIESIYNYAQKLKGKSFNNILDERILSENRISEESSIYENSTYIDKFENNFRK GGLGDFLEKVYFDIDNNSESRPDFYKANLELKLTPFKKLKNGNLSAKERLVISMINYHNI VDSEFYQSNLWHKIENILMIFYLWEKNTPRLDYRIYFVHMYSPSKEDLIIIKSDYYKIRN KVLDGKAHELSEGDTLYVGACTKSSNSSITTSQPFNDLPAKPRAFSFKSSYMTYILRNYV NSNKKKLDKIVDNKEFSDFESLVLNKLKKYYKRNELDLFKEFNIKTTAKQKYSLLTLKIL GVKTNNAEEFQKANIEIKTIKHEPSKKPKESMSFPKYKIKTLVSKDWYDSDLYKLFSTKK FLFVEFLETENGTILNSAKFWNMPYEDLNGDLKKEWEEYKNKYKKGINLIIKGNKVENDL PKMKDTRIIHSRPHSRKSAYYFKDKNLIIGNIERDADMLPNGDMMTTQSFWLNNSYVYEQ IKK >gi|325481747|gb|AEXN01000002.1| GENE 13 11371 - 12675 1138 434 aa, chain + ## HITS:1 COG:NMA1453 KEGG:ns NR:ns ## COG: NMA1453 COG0270 # Protein_GI_number: 15794358 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 2 192 3 180 423 105 31.0 2e-22 MELTVVELFAGVGGFRVGLNKVTNFDEKSGKAIENGDWKFLWANQWEPSTKSQPAFECYS KRFNESMNSNIDINKVNKESIPNHNLLVGGFPCQDYSVARSLSKEMGIEGKKGVLWWDII DVIKAKNTPFILLENVDRLLKSPAKQRGRDFAIMLKTLNELGYIVQWRVINAGEYSMPQR RRRIFIFASKKSLEYSNKLICMNEKEISNYLINDGFFNDIYKVEKDDIKIRKINLNEYSD ILDVSDNYNSGKFETSGICLDGIVFDFRVKENSTKLYPLKNILNISKLYNPKDLSKYTLD GDKLKKWEYLKGSKRIPRVSSNGNKYIYSEGKMNFPEDLEMPARTMLTSEGTDNRSSHAI YDKDIDKIRKITEVEAELIQMFPPNWTDTGMTSRQRYFMMGNALVTGIISKLENKLKTII LNENNSVQLNLFDL >gi|325481747|gb|AEXN01000002.1| GENE 14 12746 - 12946 259 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDLVFIILTICAVLCAIYQANKNKNKNKKSPKYKIAKALANILNFVTFLDLSDVNNLIG DIENDK >gi|325481747|gb|AEXN01000002.1| GENE 15 12950 - 13126 272 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325845965|ref|ZP_08169163.1| ## NR: gi|325845965|ref|ZP_08169163.1| hypothetical protein HMPREF9246_1539 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1539 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 58 1 58 58 74 100.0 2e-12 MKNPLNETLSVMGGVFLITLILNLILDIEFYNTNASITYLAFALVYFCFKKFAGKNKN >gi|325481747|gb|AEXN01000002.1| GENE 16 13394 - 14395 1237 333 aa, chain - ## HITS:1 COG:MT2783 KEGG:ns NR:ns ## COG: MT2783 COG0568 # Protein_GI_number: 15842248 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium tuberculosis CDC1551 # 102 333 90 316 323 122 35.0 1e-27 MDKINFNDEEVFEKFKDFFDEEDIDQKEAEKLYKSLTEDEKEEFDQYLEDEQLDEDEEEN IHKIKNSLVAKKRSDIIRLSDLTNEQIVEQFQEGNQNALGALVDKNQGLVRSRASYFYRS HGNDLELEDLVQSGMLGMIRAAEKFDLTLGYKFTTYAYKWIDKAIRKAINKEGHTIRIPA GKYLKLNKLKQILKANPEASEEELYKILKQEGIDKKQADDLFLINRNQVNSTSLNINLDS EDSTGDELMDMVGDDSIPVDDQILKKDMEDFLMKALDQLSDREKQIIIYRYGLDNEKPKT LEEIGTIYSLSRERIRQIENQALGKLKQYSDQD >gi|325481747|gb|AEXN01000002.1| GENE 17 14486 - 15010 546 174 aa, chain - ## HITS:1 COG:CAC3153 KEGG:ns NR:ns ## COG: CAC3153 COG3688 # Protein_GI_number: 15896401 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Clostridium acetobutylicum # 11 172 6 172 172 105 40.0 4e-23 MALTKKNITYVDGYNIINSWPDLNHIKENSLELAREKLIDEMAEYASLSNEKVVVVFDAY NSDGEKENIFEKLGVEIVYTKKFQTADTYIEKMTNQYARRHNVKVVTDDGQVQSLAFERG ASRITALELRNDLLNKRVKIKRSQKKDFSNNFKQFPLSEHIIKKLDDIKKDLEK >gi|325481747|gb|AEXN01000002.1| GENE 18 14997 - 15710 443 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 4 233 9 245 255 175 38 1e-42 MASIYGRKSVLETIDAGENIKKAHILDNKGKNHKLIDKIINKLEDKNVPIFYEDKDYFSK ISGNHQGVEIEVEDYKYKDLDDLKDKKRLMILDQIEDPHNLGAIIRSAEAFGFDGIVISE RRSAKVNSTVYKTSAGAINNIDIAMVKNINRAIKEIKEENFWVYGLAGEADGDITQTDLT GKIALVVGNEGKGLSRLVRENCDGLIKIPMLGKINSLNASVASAIAIYESLRQNGFN >gi|325481747|gb|AEXN01000002.1| GENE 19 15710 - 16570 1011 286 aa, chain - ## HITS:1 COG:SA0488 KEGG:ns NR:ns ## COG: SA0488 COG0215 # Protein_GI_number: 15926207 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Staphylococcus aureus N315 # 3 284 184 464 466 276 49.0 3e-74 MEKNKKEGEISWDSPWGKGRPGWHIECSTMSKKLLGETIDLHAGGEDLQFPHHENEIAQS ETRSGKKFANYWMHNGMIQVDGTKMSKSLGNFFTLHDIKKEYDLMVVRFWLLSAGYRLPI NFTREIIEQAKNSLERLNNAKFRMDDLLEKASGNLKDEEKDLLKELDNFENNFRKVMDDD LNTADALTVLFEISKFANTKLDSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDL INKLIDERKEAKKAKDFAKADEIRDKLSDMGIIIKDTREGTKWELK >gi|325481747|gb|AEXN01000002.1| GENE 20 16495 - 17127 910 210 aa, chain - ## HITS:1 COG:FN1579 KEGG:ns NR:ns ## COG: FN1579 COG0215 # Protein_GI_number: 19704900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Fusobacterium nucleatum # 1 196 2 194 473 213 56.0 3e-55 MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLGNDV KYVVNFTDVDDKIINKAIKENISTKEVTDKYIKAYMDDAKDLNLDEEHTIHPKATETMDD IIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDDKDKGKKRN PMDFTLWKKTKKKEKSLGILLGARVDRAGI >gi|325481747|gb|AEXN01000002.1| GENE 21 17129 - 18610 2001 493 aa, chain - ## HITS:1 COG:lin0269 KEGG:ns NR:ns ## COG: lin0269 COG0008 # Protein_GI_number: 16799346 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Listeria innocua # 1 492 1 490 491 394 41.0 1e-109 MTETRVRFAPSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTRFVEGALENLLK TLKWSGIEIDEGVMLDENGEVTEKGDCGPYIQSDRVKAGIYDKYIEKLIEEGKAYYCFCS KERLDNLRARQKADGLTPKYDGLCRSLTLEEAKEKIANGEKYTVRLKLPKDTDISFEDRI KGKITFNTNDMDDQVLIKEDGYPTYHFAVIVDDHEMGITHVVRGDEWISSTPKHVFLYQA FGWEAPEYIHLPTVLNKDHKKYSKRNGDGMVEDFIERGYLPEGLINYLALLGWSPDSEEE IFTMKELADQFTFDRVNKTGAVFDVRKLDWVNGHYVREMSVEDLAAAIKPYCIEAGFFGE DYPEEKLNLLAATWQSAIDKFTDIKDEAYVYYVDDKDMKWTDEAVEAIKTDEAKTLFDAF IKKLEEVDEVSLDFAKTIMKSIQKETGIKGKNLWFPVRAGLTGNVHGPELVNAFVIMGKE KMIDRLNYVKENF >gi|325481747|gb|AEXN01000002.1| GENE 22 18915 - 19595 519 226 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325845882|ref|ZP_08169080.1| ## NR: gi|325845882|ref|ZP_08169080.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 226 1 226 226 337 100.0 3e-91 MLKSLVKFNFKIIFKDKISIFWSIILPLVFLLINSHKKIDINEALIYCAYIIVTSYIYGV GLRALRQRESGMCKFIFGLNYQKTKYFGALLLSQIIYASLCSLIFCIGASFVLKISFLKL FSYDIVLVFLLINIGFLSYNLTLLKDVHVNSISTITDICVFVGVFLLNSPSKINLINPFY QIFLLINALIDKNFSYIGIYILIFVLTSVLSLYSIKNFSPFSKERR >gi|325481747|gb|AEXN01000002.1| GENE 23 19595 - 20170 548 191 aa, chain + ## HITS:1 COG:no KEGG:Tlet_0550 NR:ns ## KEGG: Tlet_0550 # Name: not_defined # Def: ABC transporter related # Organism: T.lettingae # Pathway: ABC transporters [PATH:tle02010] # 30 189 38 207 306 67 31.0 2e-10 MFSVFNIETLIFKINRIDFSDKINYICDKNGSGKTLFLDSLYFDNKVRIEPHIDKKDIIY LSQHFSFYERIKVKDFVEFFDQINNENLLEKIRKNSYINNFINENFNKTLYHLSGGEFKF LYLILLLFTDKKLYLLDEPFNELDKEKAKYIANLIKDLNKNGKKIIITNHYDLGLFEEKD IKKIRLLDHTV >gi|325481747|gb|AEXN01000002.1| GENE 24 20167 - 21048 1200 293 aa, chain - ## HITS:1 COG:CAC2422 KEGG:ns NR:ns ## COG: CAC2422 COG1032 # Protein_GI_number: 15895688 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 1 277 1 277 290 163 34.0 4e-40 MHYTGQVYRPPLEAYTPLLEVTYGCSHNKCAFCTMYNMTNFGISPLKDIESDILEISMTY PRPIERIYLLNGDPFVLSTQKLVEIADLIHKYIPEVKTITSYASFYNLKNKTKEDLKLLR EKGYNELWFGVETGNQKVLDWLDKGADLDDYKKGIEKMKYANMTYNAIVMQGVAGNGNSI ENARETAKFLNLYPPIGIFIMSTDVQIGSKLYKMREEGDFKETSNRENLEEQIELLKNLD VPGNVLYSSGHIVNLVKVTSHMRNKEKMIKKLEDALENLDEKILDSKNKGRAI >gi|325481747|gb|AEXN01000002.1| GENE 25 21053 - 22063 1395 336 aa, chain - ## HITS:1 COG:FN0810 KEGG:ns NR:ns ## COG: FN0810 COG2008 # Protein_GI_number: 19704145 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Fusobacterium nucleatum # 1 336 1 337 340 271 44.0 2e-72 MFNFRNDYSDICYPEILDYIKENLDQINPGYGVDDHSKNAEKLIKEKLEDENVDIYFIHG GTGANILGASVGMLPQESIIAATSGHIEDQEAGAIEACGIKIETIPTDDGKITKKLLEEK YKSFTNEHHTVPRKVYISNTTEVGTLYSKKDLEEIYDFCKKHDLYLFMDGARLAHAMANE KSDLKFKDLTKLCDIFYFGGTKNGLMFGEALVIVNDNLKKNFRNLQKQKGAMLAKGFVTG MMFERLFQDDLYIKGAKKAYQMAEKLAQGFEEKGYNLAYEFESNQVFVEISDKDIKKWEE FAYFEVGEKREDKFVARFVTTYKSQEKEIEEFLERI >gi|325481747|gb|AEXN01000002.1| GENE 26 22439 - 24511 2459 690 aa, chain - ## HITS:1 COG:SP2101 KEGG:ns NR:ns ## COG: SP2101 COG2217 # Protein_GI_number: 15901916 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 72 680 69 677 687 437 39.0 1e-122 MRASIKARTLGRSRFLFEDHLKDSNVNKLKYKIEKLKGVKFCQISPISKSIIINYDEDYI GEIARFILDFDLKSLDDFEIDDADFIPQVDKSIFHILRNAAYKRIIFGKIMPMPLRPFFT ILRAYPFIKEGLKSLKNRKMDVALLDASAISVSIVTGQFADAASIMALLSLGEELEDYTL KKSRLNLKSSLALNIDQVLVKDGDKKVFKHLKEVEIGDLIYVSMGTTIPVDGEVVEGFGM VNESSFTGEAKAVEKNEKSSVFAGTVLEEGDLLVRSKKKYDDSRLNHIIKLIEDSEKNKS LAQIKAESMADSLVKYSFIGAGLTYLLTRNFIKAKSFLMVDYSCALKLTIPIAYMKAISQ AGDENVLVKGGKYFESIAKADTIIFDKTGTLTKSEPEVKRVISFDIDEGEALRIAACLEE HFPHSIARAVVKKAKEKNLHHEEMHSKPEYVMAHGIKSTIDGKPALIGSEHFILEDEKIK ISPDQGDLINSLKEEYSLLFMAFDNKLLAVLCIDDPIRKDAKETVSNLRKLGFTHIAMLT GDNENSARAVSKKLDLDFYKSQVLPEDKEEYIKKMKDMGRKVIMIGDGVNDSIALSQADV GISMSKGADLAKEISDVSIKTDSLKELVDLVKLSKSVDRRVRKDYERIIAFNTLLIGLGL GSFITNTQSALLHNISTVAIASNNMKKYKF >gi|325481747|gb|AEXN01000002.1| GENE 27 24513 - 24854 674 113 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696930|ref|ZP_03305058.1| ## NR: gi|212696930|ref|ZP_03305058.1| hypothetical protein ANHYDRO_01493 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01493 [Anaerococcus hydrogenalis DSM 7454] # 1 113 1 113 113 108 98.0 2e-22 MIKLNKKILSAGAGVLAGAIGGKILTSKFAKKAAVATVQQGLKAKGAVDKTVENIKLTTD DIVAEAKVKNEIEERLEAEAKANLDIENVAKKEAEEKIKEEVKEELKEEAKED >gi|325481747|gb|AEXN01000002.1| GENE 28 24979 - 25227 136 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325845879|ref|ZP_08169077.1| ## NR: gi|325845879|ref|ZP_08169077.1| hypothetical protein HMPREF9246_1552 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1552 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 82 1 82 82 152 100.0 1e-35 MNLQSWIFLLVILGICSYIVYTRFIKEGSNFGCKDCAQKSSCSSDTCHSKKEKTKRNHAH IVTDCFLKGGLLQKINLRRSSF >gi|325481747|gb|AEXN01000002.1| GENE 29 25252 - 27402 2838 716 aa, chain - ## HITS:1 COG:L190009 KEGG:ns NR:ns ## COG: L190009 COG0370 # Protein_GI_number: 15672169 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Lactococcus lactis # 5 712 4 709 709 635 46.0 0 MTYTVALAGNPNSGKTTLFNELTGSSQRVGNWPGVTVDKKEGKLKGHKDIIIQDLPGIYS LSPYTMEEVVSRGYLVDQRPDLIVNLVDGSNLIRNLYLTSQLIELGIPTIIALNMMDIVK SNGDVIDKDNLSKILGCPVVEIVASKKQGTKDLINEIVKSENKLSLPNPLKYSGELEEAL EKISSEISGSVDSKLERYLSIKAFENDEDMFENISLSADKKENINKIREDFEKIEDDVAE GIVTTERYEALGEVGEKVLKKAPPKLSTTDKIDKIVTNRILGLPIFALVMFVIYYIAIST IGTGATDAVNGFFEDTMTPAVADFLTNIGISDVLVSLATDGIISGVGAVLGFLPQMLVLF AQLSILEDIGYMARVAFVMDRVFRRFGLSGKSFIPVMIGTGCSVPGIQSSRTIENERDRR ITIITTSFMPCSAKLPVIALIAGAFFKENQALVTFSFYIIGIVSVIISGIILKKFKEFAS DPAPFVMELPPYHAPRVTSVLRDMFNKGMAFVKRAGTIILVSSIIIWFLSNFDFSFKLVE AESENSILAVLGGYLAVLFKPLGFGQWQSAVATITGFVAKENVVSTMGVVLGIGADLDET NRQLITAFNQAIGTPVAGYSFLLFNMLCMPCFAAVGAIKTEMNNNRWTLIAIGYQMTFAY AIAFVFYHLANFFVYKEFSIMTILSLIVLAAILYLIFRPVKYKEEKRTYKLNLARK >gi|325481747|gb|AEXN01000002.1| GENE 30 27403 - 27627 323 74 aa, chain - ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 4 72 80 148 152 67 49.0 8e-12 MKSLKDVAVGESAVIKKIKGDGATIRRIMDMGITKKTEVYVRKIAPLGDPIQVNLRGYEL TLRKEDAKNIIVEE >gi|325481747|gb|AEXN01000002.1| GENE 31 27627 - 27848 248 73 aa, chain - ## HITS:1 COG:no KEGG:Apre_1460 NR:ns ## KEGG: Apre_1460 # Name: not_defined # Def: FeoA family protein # Organism: A.prevotii # Pathway: not_defined # 1 71 1 71 72 89 61.0 3e-17 MPITLLNNGQEAEVIKIKGDDEIKTHLSNLGFVKGKTIKLFFFDGVNYIIMVDNSKYALN KDLAKRIYVKEIN >gi|325481747|gb|AEXN01000002.1| GENE 32 28984 - 29850 935 288 aa, chain - ## HITS:1 COG:FN1927_2 KEGG:ns NR:ns ## COG: FN1927_2 COG1307 # Protein_GI_number: 19705232 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 276 1 273 285 111 26.0 2e-24 MEKVKIIADSGCNIDLEMAKEYDISILPFKINFKDKSYTDLYELSREDFLKKYKESKERV TTSTPGPGEFLKLLENEYQKGYRNFLVFSISKKFSGMNQMMELMKDEFLEKRKDAKVKVI DTYTATIAAIYPIIKASEYAKNGLGLDEIYKKSLDNLKYANVTGVVKNLDALQRGGRLPK TLVKLANLISFSPILCIEDGEIKLRKKVTGKKKSYKELIKYIQKLCKKYDSYQIIIGGAD SEDEIEILKEGLEKEIKKALDFKIIDVTPVIGVHLGDGVVFCSVFPIK >gi|325481747|gb|AEXN01000002.1| GENE 33 30083 - 31600 1757 505 aa, chain - ## HITS:1 COG:CAC3169 KEGG:ns NR:ns ## COG: CAC3169 COG0028 # Protein_GI_number: 15896417 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Clostridium acetobutylicum # 1 500 1 500 554 515 52.0 1e-146 MKIRGAEIIVKTLIDEGVDTIFGYPGGSVIQVFDALYDYKDKLKLVRTSHEQGAAHAADG YARSTGKVGLVLATSGPGATNIVTGIATAFMDSIPLVCITGNAGRKLLGKDSFQEIDIMG ITMPITKHNFIVRDVKFLQDTIRRAFMIANSGRKGPVLIDIPSDIMAELCNYEKKESLKE EKKDLVNEDEILEIAKCINSSKKPIIYSGGGVTASESFKELRKLIKLSNIPACNTIMGIG VLGYEDELNLGMLGMHGKYSTNNAIAECDLLIACGVRFSDRVALNTKKFAKNAKIIHIDI DKSEIDKNIYADYKLVGDVKEVLNALLPKIEKKERRDWLDHINELRKEDYRPEDSKDKIK PHQVIKNISKTLGEDMIFVTDVGQHQMWTAQYCGRTKPRSFLTSGGLGTMGFGYGAAIGA KVGNPDRNVVLITGDGSFNMNFNEIITAVNNNIKVITVVMNNKTLGMVRQWQHLLYNDRF SGTNMEENIDYIKLSKSLGACDFSY >gi|325481747|gb|AEXN01000002.1| GENE 34 32121 - 32633 745 170 aa, chain - ## HITS:1 COG:BH0463 KEGG:ns NR:ns ## COG: BH0463 COG0628 # Protein_GI_number: 15613026 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus halodurans # 26 120 236 326 372 74 45.0 1e-13 MKKEFLKKYLKEAGLGLKDLLRALIISSIINFVVLAIGLGILKIKYFILIALLIAFVDLL PVLGAGMVMIPWAIIEIFVGNMKLGFSLGILFALTFIIKQIIEPIILGRSIGLNPFLTIL ISVSFMIFLSPGLGALVGPIVSMMIGTFLEVRKAFEFEKNQDEKIEEKKS >gi|325481747|gb|AEXN01000002.1| GENE 35 32721 - 33767 1077 348 aa, chain + ## HITS:1 COG:no KEGG:EF1030 NR:ns ## KEGG: EF1030 # Name: not_defined # Def: endonuclease/exonuclease/phosphatase family protein # Organism: E.faecalis # Pathway: not_defined # 1 348 1 351 351 263 43.0 9e-69 MKKILKIFLSLIGVFLLGFLILLSYLWIREYRPEKIEDVKVYGRGEKIPEIGKNYRVMTW NIGYGGLDKDTDFFMDGGQMVFPINKNHVEKSIDHIISTSKNINADIKLFQEVDYDSKRS FHINQVEKLRENLLGSSTFALNFKTDFIPYPIPPMGKVQSGIMTQSDFEIKKSKRYQQEI PHKFPTRLVNLKRAFNPSYIDIKNSDKKLVIVNVHLDAYESGNKGRVAQTKEIIDFVNKE YKKGNYVLVGGDFNQELSGKYKKLPEGIWNPSPFPKEMLTKNIKLYYDKNGKTSVVNDKP YTGKDAYLSTIDGFLATDNIKIKTIKTQAKENFQYSDHNPVVMEFVLK >gi|325481747|gb|AEXN01000002.1| GENE 36 33816 - 34595 976 259 aa, chain - ## HITS:1 COG:BH2659 KEGG:ns NR:ns ## COG: BH2659 COG0561 # Protein_GI_number: 15615222 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus halodurans # 5 259 4 257 257 131 30.0 1e-30 MKKIKMVFFDIDGTMISLDKETISKKTALSLRKLKENGIKICVATGRSPIQIPDFSGISF DAYLSFNGSLIFNDREDIFKNPLSMDDIFTLMENAKDMDKPMAIATRDLYACNGTNFDLE EYFSFGGSQPEVYDDFEDIIENDDIFQAILPIRANEYERAMKNISSTKIAAWWDRAVDLI PKNGGKGKGVEEILSYYNIKKDECLAFGDGNNDLEMFEAVGYGICMENGSRDLKKISYDV CKSVDDDGIYYYLKDKGII >gi|325481747|gb|AEXN01000002.1| GENE 37 34712 - 35224 400 170 aa, chain - ## HITS:1 COG:CAC2508 KEGG:ns NR:ns ## COG: CAC2508 COG0778 # Protein_GI_number: 15895773 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 1 169 1 169 182 128 45.0 6e-30 MEFIELVKNRFSCKNFSDKKVEDEKLDLILEAGRFSPTAKNKQIQRVYVCKSKESLNKID ELTPCRYKAPLVLLVAYDESEAFVYPGGKYNSGAEDASIVASHMILAAASLGVDSCWVNF FDPDKASEKFSLPENEKVLAMIDLGYANDGVKPLENHFKRKNLDETVKFI >gi|325481747|gb|AEXN01000002.1| GENE 38 35827 - 35931 73 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLNTYFNTSNVINQLAEDAGLELLNSFQYIKCY >gi|325481747|gb|AEXN01000002.1| GENE 39 36660 - 36941 311 93 aa, chain - ## HITS:1 COG:TM1796 KEGG:ns NR:ns ## COG: TM1796 COG1343 # Protein_GI_number: 15644540 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Thermotoga maritima # 7 90 2 83 87 61 46.0 5e-10 MGKNYNYIFLFYDVGEKRVNKVFKICKKYLNHHQNSVFRGEISPSKIIALKREIEKTIKK EEDFVSIIKMYNKESFEEETIGKYKSLGEDFIL >gi|325481747|gb|AEXN01000002.1| GENE 40 36941 - 37939 730 332 aa, chain - ## HITS:1 COG:MTH1084 KEGG:ns NR:ns ## COG: MTH1084 COG1518 # Protein_GI_number: 15679095 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Methanothermobacter thermautotrophicus # 3 328 16 332 334 242 40.0 6e-64 MGKTKYLLTDGQIKRKDNSLVYRVNGKNVYIPIESIRELYILSETTINTKLLDFLASKHI VLHFFNYYGNYSGTFYPREKYISGKLLVKQVDAYKEKRIEIAKKIVGAIGKNMYQILYHY YKHDKKEVKTFLDYLKNEIPKELEKSNDIKQILYIEGKIWQGFYDSFKYFLNEDFILNKR VRRPPDNPINALISFGNSLLYTKTITAIYRTHLNQAISYLHEPSESRFSLSLDMCEAFKP ILVFKTIFDLVNNRKIRVEDHFIKEQNYCILNDEGKKIFIASFEKRIETKFKNEKLKRNV SYQTQIKLDCYKLIKYILEDKEFEPYLLERKY >gi|325481747|gb|AEXN01000002.1| GENE 41 37948 - 38433 421 161 aa, chain - ## HITS:1 COG:MTH1085 KEGG:ns NR:ns ## COG: MTH1085 COG1468 # Protein_GI_number: 15679096 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Methanothermobacter thermautotrophicus # 1 159 14 173 175 72 33.0 2e-13 MNGIIINYYFHCKRQCYLFANKLNFEDNSELVKIGKEIYLNKSENKKNAEIKIENIVVDK ITDKYLIEIKKSDADKEAARWQLYYYLYILKHKGIIKKGKLEFVENNQGKKIEYLDLDDK KEKEVEKLIKEIEVFISKEEIPKFKKIKGCTKCAYYEYCKI >gi|325481747|gb|AEXN01000002.1| GENE 42 38430 - 40952 2063 840 aa, chain - ## HITS:1 COG:SPy1567 KEGG:ns NR:ns ## COG: SPy1567 COG1203 # Protein_GI_number: 15675459 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Streptococcus pyogenes M1 GAS # 70 673 40 628 802 88 22.0 5e-17 MKLDFIVKNLDKYLGHIEGVGNNKEKLEDHINKTFAYYQKIIDEKNLGKVFERFFLSIFD QKEGYTYFKDLIDSVILFHDLGKINSRFQRNKLKNFEIDLTDLGIEGEHSILSSFIYVYN FVGKIRNLEIDDELKEKFYYIIFLNAFIISRHHSDLSDFSYESHNFFDLFIDERSKFYKT LNYLRKDKNIKEEFFDDFEEVSNEIMDLVYDFDMDSSYIDFKKSKSKEIYIYTRLIYSVL VAADFYATTDYMNGYKTKFPKIDQNDLIKIYNNSKLIKNIRQSQKSKSYEKKENINDLRT KIFLNAEKNLEEERDKNIFFLEAPTGSGKSNTAMNLSYKLLNDQINKIIYAYPFNTLVEQ NKNTLLKYYKKTSIEENISIINSITPIGKSDNDDFMKDWDYYIKSLLDRQFLHSPFIITS NVGLFNTLFSNKRKNIFGLYQIANSVIVLDEIQAYREDLWNEIIEMLEIYAKTFNLKIII MSATIPDLSTLLDEDKKKNIGKLIKNPREIFDEPLFKNRVKINYDLLDLGKIDYDHLLNH MKENIGNHQKILVEFIRKKDAENFFKLISEEEFFEKYNILILTGDDNLRRKAQVIRQISG EVIKKTILIASQVVEAGVDIDMDIGYKDISMLENEEQFLGRIGRSALKNDAVAYFFDMAD EKKIYKNAQDILTLRNKDRRKDLQTKDFSRYFALKLQKAKNDRDEYAYINFEKDLIKLNF EKISKHMELIDDNRQMIELFLNRNLKIDGKEINGSEIWDQYVNLIENKDMDYSEKIVKLS EKKAQMSDFIYRISKRDFLKYIQTANDIIGNIVYIGDGERYIYKERLSYKDENDEFGDII >gi|325481747|gb|AEXN01000002.1| GENE 43 40942 - 41679 802 245 aa, chain - ## HITS:1 COG:no KEGG:CTC01466 NR:ns ## KEGG: CTC01466 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 220 1 242 256 199 47.0 1e-49 MKALRFRLSGKTGFFKQPDVNTYLYYTYGQIHRVALLGFLGAIVGYKGYNDKDRDKYPEF YKKLKDLKISVVSEGNNGVFDRKLQVFNNSTAFASNHQGGNLVIRQVWLENPSWLIYILL DNDQSKLIKEYILDKKTIFTPYLGTNDHMANISDCEIVDIEKSDENIIDSLFWSDDFKLR LKSKIYKYEENLPFFLEEDTERYIRKKTLASNGEVRKKTDKDVIFEDIDNKLKLVFYSEE GIYET >gi|325481747|gb|AEXN01000002.1| GENE 44 41681 - 42634 1076 317 aa, chain - ## HITS:1 COG:no KEGG:CTC01467 NR:ns ## KEGG: CTC01467 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 4 315 3 319 319 301 56.0 4e-80 MTELNKRVYGIIGIGSKMANWNADFSGFPKSLSSGEIFGSDKALKYTMKKKWLEEGEKVV YIKSYIIDNKGNIIPRTLKERYEQVFDTEIKSGESEKILTNLFSATDVKNFGATFAEKGN NISITGAVQISQGMNKYEDSRTLDQQILSPFRDPNAKEKSKLEEDAKNSTLGNKIVSDEA HYFYSFVINPKAYDDYKKLGVTEGYSEKDYEKFKLAATDSATSYATNAKEGANNEFSMFV ETKLDTYLPSLANYIEFEKSSEKNLNDKIIFTGKYILEKRDDIEKIQIYYDNEKIDLVNF PDNIEIYNIYTREKIEA >gi|325481747|gb|AEXN01000002.1| GENE 45 42621 - 44390 1460 589 aa, chain - ## HITS:1 COG:no KEGG:CTC01468 NR:ns ## KEGG: CTC01468 # Name: not_defined # Def: hypothetical protein # Organism: C.tetani # Pathway: not_defined # 1 582 1 579 579 206 32.0 3e-51 MLEECLEIFKKNLDEDPDMVLRGYIPKDGKYYLVTMKEEGPWEVSPSFKIKYDKKEKKIE NQPLNFSLIKNLDFYSNIINTQKPIDSKKSIHSSNYYSFFFKENSYEDKINKEAIERYFS ILKNPLKKYKDKRAKNLYLENEEKLGPVNVEEAEKIEKWLIENIDKKELFDIDENSKDYF KILFIYEDEEKTKKAYQREQDRYLLTNLFNKNKYNIEVGGKTFGVSNDNFGVDMKKPYLE NLSRKVKQPYLISMNTAKLQNLFFSYLSSSVKRGNNRIYFNTENMEISFEKNKNFIGFEL FLYPEKKEAAILDYNIYSNDFDDIEIQINQYIEEYLPENVKADDFSKREEKYGLVTEKKT LLNKIDSVFFYNYYQRNKYNLENLNIKELNFKMIILNYGKSLEFAIINNKNKEVVRILDR LLDDSIKYSLTNAYNTKAITQFNYYLSLKEYYEKKEENYMDFRENMKRKLESAGDISLEG DEEILFAIGQVLRKLLNNSKIGDKNLSFIRNFLDEQKTSKIIENLKHLLVTYAHNISTKD VRFNMAVSQIMVYEFEKEKTDDKWIIAGFLDESYLYGKKLSEGEENDRA >gi|325481747|gb|AEXN01000002.1| GENE 46 44402 - 45088 591 228 aa, chain - ## HITS:1 COG:no KEGG:ELI_0133 NR:ns ## KEGG: ELI_0133 # Name: not_defined # Def: CRISPR-associated protein Cas6 # Organism: E.limosum # Pathway: not_defined # 1 227 1 230 230 176 42.0 1e-42 MKVYELKVRTFLLEDIDSCDSLEFISKAIISYLSKDEKFLNMHKAKNYKSYCHDNLYPIK KFYKKNMVYQYRIRSVDENFVNYILDGFSNYNDKVFKNLTVDVRIIPKSPISKLFTLNPV IIKNDFGYWKEKLALEEFEKRITDNLIKKYKFFIDEKIEEGKFYTSLKFLNEEPIAFKFK DIKLLGDKLEFEINMDKRSQDLAYFALGVTFSENSSYGAGFLGYKYII >gi|325481747|gb|AEXN01000002.1| GENE 47 45302 - 47035 2368 577 aa, chain - ## HITS:1 COG:TM0201_2 KEGG:ns NR:ns ## COG: TM0201_2 COG4624 # Protein_GI_number: 15642974 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Thermotoga maritima # 220 576 8 365 372 368 54.0 1e-101 MINLTINGKNVEVSEATTVLDAARSLNINIPTLCHMDLHDIKFVNKLASCRVCLVEDLDK GKFIPSCATFVKEGMNIRTDSQEVIKARRTIVELLLSDHPNDCLKCAKNLNCQLQKLAHD LNIREIKYTGEMRNLPIDDNSYSLVRDPNKCILCRRCETMCNTVQTVGALAEVGRGFNTH VGSTFNRSMFETTCTFCGQCLSVCPTGALTEKSNIKEIWKLLESDKHLIVQVAPAVRVAL GEMFGRKPGESVEGEMVTALRNLGFDKVFDTNFAADLTIMEEANEFVQRLNGKGKLPILT SCCPGWVNFMEQQFSDLIDIPSSCKSPHEMFGAIAKTYYAEKIGKKPEDIKVVSIMPCIS KKYEAKRDELENEGYSDVDIVLTTRELGAMIKEAGIDFNKLEKSDFDNPMGESTGAGDIF GTSGGVIEATIRTAYDTITGEELEKVEFEDLRGLKGIKQAKVDINGREIKIAVANGLGNT RKLLEKLRNKEIDLDAIEVMACPGGCIGGGGQPYHNGKISILKERSKGLYQIDKNKKLRK SYQNPYIKKLYQEYLGEVGSEKAKELLHTSYKARPKL >gi|325481747|gb|AEXN01000002.1| GENE 48 47045 - 48625 2087 526 aa, chain - ## HITS:1 COG:TM0010_1 KEGG:ns NR:ns ## COG: TM0010_1 COG1894 # Protein_GI_number: 15642785 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit # Organism: Thermotoga maritima # 17 457 84 527 527 580 61.0 1e-165 MNKDKLLAIKEKSLEELKNRLDYEKVYEDDEGNLKLKGKFYQNQTRLVLKNCGIIDPNNI DEYISQDGYFALNKAIFDLDRKEIIDIIKDSGLRGRGGAGFPTGRKWEAAFNQDIDTKYI ICNADEGDPGAFMDRSVLEFDPHSVLEAMAICARAIGSKQGYIYVRAEYPKAVKSLQNAI KQAREYNLLGENIMGSDFSFDIDLRLGAGAFVCGEGTALMESIEGKRGMPRNKEFRTTVK GLWGKPTVINNVETFANIAQIINKGSSWFRSFGTEKSPGTKVFALVGKVKESGLVEVEMG TSIKKIVYDIGLGIQNDKKAKAVQTGGPSGGCIPTKLFDTACDFESLKEIGSIMGSGGMV VMDEDDCMVDVARFFLEFSVDESCGKCTPCRIGNKRLFEMLDDLTKGKANEETLEKLEEL SKIVSETSLCGLGQSSPNPIISTMYYFKDEYQAHVGENKTCPAKRCRSLLSYLIGEKCIG CGKCKMLCPVGAISGEKRNRHEIDHDKCIKCGQCMENCPIEAIALV >gi|325481747|gb|AEXN01000002.1| GENE 49 48612 - 49115 634 167 aa, chain - ## HITS:1 COG:TM0012 KEGG:ns NR:ns ## COG: TM0012 COG1905 # Protein_GI_number: 15642787 # Func_class: C Energy production and conversion # Function: NADH:ubiquinone oxidoreductase 24 kD subunit # Organism: Thermotoga maritima # 12 160 23 173 176 129 45.0 2e-30 MSFCYNLDKDKFDEFCEFLDENIGKKGAVMPVLQKCQNLFSYIPEPIVDLMALNLGVSSS EIYGVATFYSQFSLKPKGEHEICVCLGTACYVKGSDKILKSLSDELGIEVGDTTEDGKIS LAEARCIGQCGIAPVVSIDGNLDIGNLSSADVHKIILKAKEIDHEQG >gi|325481747|gb|AEXN01000002.1| GENE 50 49541 - 49924 470 127 aa, chain + ## HITS:1 COG:Cj0296c KEGG:ns NR:ns ## COG: Cj0296c COG0853 # Protein_GI_number: 15791664 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate 1-decarboxylase # Organism: Campylobacter jejuni # 1 126 1 125 126 155 61.0 2e-38 MNIEMLEGKIHRATVTQAELNYVGSITVDEALLEASGIREYQKVQVVNINNGQRLETYTI AGEKDSGIICLNGAAARLCSKGDMVIIMAYASYDEKDLENYRPKVVFVDDKNKISKISSY EKHGKLS >gi|325481747|gb|AEXN01000002.1| GENE 51 49983 - 50822 1065 279 aa, chain + ## HITS:1 COG:CAC2915 KEGG:ns NR:ns ## COG: CAC2915 COG0414 # Protein_GI_number: 15896168 # Func_class: H Coenzyme transport and metabolism # Function: Panthothenate synthetase # Organism: Clostridium acetobutylicum # 1 279 1 281 281 320 56.0 2e-87 MKVIKKIDELREILKDFKKEGKSIGLVPTMGFLHKGHASLIKKAVSENDIVVVSDFVNPI QFGPNEDLEAYPRDIDADSKLCEDLGADFIFNPEANEMYHDKKAFVDIEELSHNLCGARR EGHFRGVCTVCTKLFNIVGPNRAYFGQKDAQQLAIIKKLVFDLNIPVEIVACPIVREEDG LAMSSRNTYLSTDERKAALCLSKAIFEGEKMANNGASVKEVLRKMEEIISSEKLAKIDYI SAVDLETIEDVENFDKDTLVAIAVYIGKTRLIDNFIYEV >gi|325481747|gb|AEXN01000002.1| GENE 52 50825 - 51781 1457 318 aa, chain + ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 311 1 309 321 267 46.0 2e-71 MEKFSRISDKITQNIGLIIVIFSVVAYFVPDYFSWMTNYTTIFLALAMFGMGTSIEADAF KKILKNPRDIFIGSLAQFTIMPLIAWILALGFNVNRDIALGVILVGSCPGGTASNVITHI AGGNVSLSVSMTILSTLLAPLVTPFLVYLLAGRWVEVSILAMFKSVVTVVLIPVLMGIFA KKLSPEKMEKSKSIFPLISSLAIILIISGIIGANSEKIAKSGLIVLLIVMIHNALGLLLG LGVSKLFKMDYDKQTALSIEVGMQNSGLAIQLATANFALNPLATLPGAIFSIWHNISGSI FASIRRKDVKEIALAREK >gi|325481747|gb|AEXN01000002.1| GENE 53 51823 - 53043 1212 406 aa, chain - ## HITS:1 COG:TM1585 KEGG:ns NR:ns ## COG: TM1585 COG2379 # Protein_GI_number: 15644333 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glycerate kinase # Organism: Thermotoga maritima # 1 405 7 416 417 367 48.0 1e-101 MDNLIRKIVEESIESSLPDKAVTRELKNLPEVKGRKILLAIGKAAYQMAKTALESDIKFD QAVVITKYNHLKTNLENAVCFEAGHPISDENTIKASQYAYDLVGNLTEDDLLVMLISGGG SALFEIPLISFEEIQGINKQLLKKGADIVEINTIRKRLSKIKGGKFARHCYPAKVYNIIL SDVIGNRPDMIASGPTYEDFSTCEDALNIVNKYGLVLSESARKCLNEETEKNLPNITTKI SGSVDQLCLKVKEILEDEGYKTDILTTFMDCQAKEAGYILSSIAKSKSAYKERLAYIFGG ETIVKIKGNGKGGRNQELALASAKHIRGLKNVKIISFSSDGTDGPTDAAGAFVDGYTMDK LKEKNINYYEVLDNNDSYNALNEIGQLIKTGPSGTNVNDVSIVLIN >gi|325481747|gb|AEXN01000002.1| GENE 54 53142 - 54815 2438 557 aa, chain - ## HITS:1 COG:CAC3170 KEGG:ns NR:ns ## COG: CAC3170 COG0129 # Protein_GI_number: 15896418 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Clostridium acetobutylicum # 5 556 1 547 552 604 55.0 1e-172 MSKKMNSQKVYQGPERIEARSLLYATGKLEKDIGRKPLIGVVNSFNEIVPGHFHLRSLAD AAKLGVAAGGGIPVEFPSIAMCDGIAMSHAGMHYPLASRELIADSIEAMAKAHGLDGLVL IPNCDKIVPGMTMAALRLNIPSIIVSGGPMATGHYKDEVADYSTCIEQVAAYKLGEKSEE EMEEYAHAACPSCGSCAGMFTANSMNCLSEVLGLALPYNGTIPSYYGDRIALAKIAGERS VALVKEDIKPRDIVTEEAFKNAIVVDMAIAGSTNTTLHLPAIAHECGLELSLEKFDEISK NTPNLCHISPSGDKFMFDLHMAGGIPAVMHELDKKSLLNTSLKNINGKTIKENIEGKETR DHDVIRPIENPFNDQGGIAVLKGNIAPGGCVVKSAAVRPEMMKHKGEAVVFDSMEAATEG IFDGKVKKGNVVVIKYEGPKGGPGMREMLTPTSAIVGMHLDNDVALVTDGRFSGATRGAA IGHVSPEAMDGGPFAIIEDGDVIEIDIENRSINIDLTDDEIKERLDKLVKPEPKIKEGYL VRYARAVSSANKGAILE >gi|325481747|gb|AEXN01000002.1| GENE 55 54825 - 56096 1289 423 aa, chain - ## HITS:1 COG:HI0092 KEGG:ns NR:ns ## COG: HI0092 COG2610 # Protein_GI_number: 16272066 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Haemophilus influenzae # 1 418 1 416 419 330 51.0 3e-90 MASVSTIGALIALVIAISVIVMGAPPAYGMILGALIGGIAGGANAKEVVTLMFDGAGGMS PTLLRIMAAGVLAGALINSGSADVIAENIVEKLGEANSLIAIVASIFILTAIGVFADVAC LTVAPIAMVIAKKTNYSKSVIMMAMCGGTHAGNVMSPNPQAIALSDYFQIPLTSVMIGGI IPAIFGFVATVYITKLVHKMGIGSEVLLVEEKGNVNFSKPSLLAAITGPLISIILLALRP IMGIEIDPLIALPLGGFITCILTKEVKNFVNFSTKGLNMMSGVILLLLGTGALSGIIANS GLKESLIHIVDILGLSGFLLAPITGLTMGAATASATAGSTVGSQVFGETILSFGVKPLQA AVMIHAGSNTLDGLPHGSFFHTSAGSVRMDIKEKLRLLPFEFCVGLVMTIVSTIVYGLIG LNF >gi|325481747|gb|AEXN01000002.1| GENE 56 56219 - 57868 1569 549 aa, chain - ## HITS:1 COG:STM0652 KEGG:ns NR:ns ## COG: STM0652 COG3829 # Protein_GI_number: 16764029 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains # Organism: Salmonella typhimurium LT2 # 27 178 31 188 642 67 27.0 6e-11 MKIFIVGTYEAMVRPIENLKNKYKNCQIDYGIAMLEDGLKLAIDAKNNGYDAIISRGGTA RLIKKHLDIPVIDAKPSGNDLLKSILIAKNNQTKTSIIAYSNITDGAIEIIRLLNLDFKI HYIKNDLDLTNLLIKLKEEGYQQILGDSLAIKVAKDLNFNTVLFQTGHESLENSLEYAIM ILNQTQKIKRIDTIRSKFLTKFNKDYCIMQNNKIIFSQFINFKKMPISYEKCISLKYEFE NNEFNTPYIQARVGEVNLEVSSIEISSDKFYLYNFKKVESDYEKPIGIYDLDIKNNFLPV TKSESMQKLFAKAKRLIKEKNPIFIIKDNEYTLNELLNFIIGINKNSTLLIDLDKINIDS YDEILKYKKKNILIKNIKDYEIISNISKKNIEERFIILLEKDSKIIDYIDEKQTLLIPNT RQRKDDLNLIFNNYIAYYHEKFATRALGMEDYIFDGENPLLNKNLDYLLKKLKNYIFTRN ELIVGKDVFTKKIEESSKKEIFDSKNLEEIEKELIIYHLKKEEYNQSKVSEILGISRSTL WRKMKKYKI >gi|325481747|gb|AEXN01000002.1| GENE 57 57992 - 59356 1388 454 aa, chain - ## HITS:1 COG:CAC1531 KEGG:ns NR:ns ## COG: CAC1531 COG2461 # Protein_GI_number: 15894809 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 83 438 11 391 405 166 31.0 1e-40 MTKKIDINKAIYDLVNHDDKLKEDLIGLGFKNLSNPLMLKTMGKKMSIRRGAKMVGIDNV EKKLEDLGYEIVNSYDDLEVKNRRELIKSYVKRLSEGEDLESVRKDFVKNFENVSSSEIM DAEEALLEGGVDRADVQRLCDVHSSLFHGKTESEGGKDLKLINISGHPLRFFFLENEEIK KLIDLGEDRKDLEEIKDISNKITSHYRKKGDLIYPLLKENYNKPGPSDIMWGVDIEISKN FKKAFKKSDFDEVKKVFERAREMTYKEENILYPLMEDVISNEDFLGLYEDLKAYPDDIIE KEIWDEGENFKDETNSKDGYINFSKGKVKVNELEALLDTLEIEITFVDKNDINAYYNDIK GEKIFKRAKTSLGREVYSCHPPQVEPIVRRLIGEFKEGSKDKFQIIKNIKGHDHAVTYYA VRDKNENYLGVLETVQDLSFYKSYLEIWDKAKKK >gi|325481747|gb|AEXN01000002.1| GENE 58 59444 - 60142 535 232 aa, chain - ## HITS:1 COG:Cj0021c KEGG:ns NR:ns ## COG: Cj0021c COG0179 # Protein_GI_number: 15791420 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Campylobacter jejuni # 11 229 67 285 292 187 44.0 1e-47 MEEVSGPYKILSPIEYPKQDIICIGMNYIDHKDELEFVSKEDFSKDVDTIYFSKRANKIL GNEEKIPLNEKITDCLDYEIELGVIIGKDCKNVKANEAKNYIFGFTIFNDLSARDLQTKY RQWYYGKSFDGSSVMGPCILLNDGSFDYNNLRLITKINGEIRQENSTKNMILSVDKMIEN LSEAMTLKKGTIIATGTPSGVGMAFDPPRFLKKEDKIEMEIEKIGVLKNIVG >gi|325481747|gb|AEXN01000002.1| GENE 59 60223 - 60297 93 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKILYVEIENKKKILIEKNKKDIF >gi|325481747|gb|AEXN01000002.1| GENE 60 60514 - 61152 451 212 aa, chain + ## HITS:1 COG:FN0555 KEGG:ns NR:ns ## COG: FN0555 COG1396 # Protein_GI_number: 19703890 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 31 212 21 199 199 117 40.0 1e-26 MPKKYILLYIYGIIIFSKTNLKEKGDPMDKLGKNIKNFRISQNLSLKKLAEKVDVSPSML SQIESGKANPSLNTLKLISQHLKVPMFTLFIEEDVDRPILVKKNDRIHITNKGEDSKYKL SYDLLSPDTKGDLQLCEMKLSAYQFNSDNFNFHNGEEVAVCTLGKIELILENKTITLETG DSVRIPRKTKHRWKNPSKATCAIIFSISPPIF >gi|325481747|gb|AEXN01000002.1| GENE 61 61307 - 62161 988 284 aa, chain - ## HITS:1 COG:CAC1624 KEGG:ns NR:ns ## COG: CAC1624 COG1307 # Protein_GI_number: 15894902 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 281 1 277 280 119 30.0 6e-27 MEKIKIIVDSGNSISLEEAKKYNIGVISFKIHFGDKTYTDQVDIENEEFFDKLGKSEEKV TTSIPGVGEFTEMLEKYIDEGYNKILCFSIGSSLSGMNNMMNLAKDHIEKDVTIDVIDTK IASLPLYFIATKAAQAVIDKKSYDQIYKQALADVEKANVFVRADSLDYLVKGGRLPKSIG KVANLINFTPIFTMKDGEIKIAKKVIGKKKSFKEMAKIVKKKIKDKKEYMLAIGGGSSFE EIKIMKELLKDEIKNAKLFKEMPVPPVFGVHLGPKSLLVSVVDC >gi|325481747|gb|AEXN01000002.1| GENE 62 62238 - 62927 967 229 aa, chain - ## HITS:1 COG:PM1506 KEGG:ns NR:ns ## COG: PM1506 COG0588 # Protein_GI_number: 15603371 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Pasteurella multocida # 4 229 2 227 227 323 68.0 2e-88 MTKKLVFVRHGQSEWNLANKFTGWVDVDLSEKGVEEAKEAGRKIKEAGIKFDVAYTSILK RAIKTCNFALEYSDQLFVPQVKSWRLNERHYGALQGLNKKETAEKYGDEQVHIWRRSYDT LPPALSDEDAKEQASQDRFKEFPKEIIPVAENLKVTLERCLPFYTDNIAKDLLDGKTVLV AAHGNSLRAMAKHLEKISDDDIMDLEIPTGKPLVYELDDELNVVEKYYL >gi|325481747|gb|AEXN01000002.1| GENE 63 62927 - 63976 1302 349 aa, chain - ## HITS:1 COG:BH3739 KEGG:ns NR:ns ## COG: BH3739 COG1077 # Protein_GI_number: 15616301 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Bacillus halodurans # 4 329 2 331 334 301 49.0 1e-81 MSRFRKSVAIDLGTASVLVFVEDKGICLEEPSVIAKDTLTGKILSVGKDAKKILGRTPGN VVALKPLKDGVIADFKATEEMLKYFLKKSMDKSFFKPDLLICVPSKATQIEKRAVLQAAE NAGAHRVYLIDEPLAAAIGADIDITDEKGNMVIDIGGGTSDIAVVSMGQIVTSDSIEISG DTFDNDIKDHIRKRYRMLIGESSAEMIKIKAQEVDFTDSIEVVGRLIEDGLPSRIYIPVG EIYACLLPSIDKIINGIKNVLEQTPPELAADLYERGIFLTGGGALTLGLSKRIKERLQIG VKIAEEPRECVIKGTANALTWIDNIDEEKNESMKAKQKQLEKKEKMRRR >gi|325481747|gb|AEXN01000002.1| GENE 64 63985 - 65154 1660 389 aa, chain - ## HITS:1 COG:BH3300 KEGG:ns NR:ns ## COG: BH3300 COG0192 # Protein_GI_number: 15615862 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Bacillus halodurans # 2 389 7 398 399 480 60.0 1e-135 MKKLFTSESVTEGHPDKVCDQISDAILDECLKQDKNSRVACECVTTTGLVMVVGEISTKA YAPIENIARETIREIGYDDPKLGFDYQNVAVLTSLIEQSPDIAQGVDDSMDYKSTNDKYD KIGAGDQGMVFGYADDETEEYLPLSVVYAQKLVQRLTYVRKEKILDYLRPDGKSQVTVEY EDGVLKRVDSIVISTQHSEDVSLEQIKKDVIEKVIKEVIDPKYIDDDTKYYINPTGKFVV GGPKGDSGLTGRKIIVDSYGGYSKSGGGAFSGKDATKVDRSAAYMARYAAKNMVAAGLCK KCEIGVAYAIGVARPLSIYVDSFGTGKYEDEKLSEIVKEVFDFRPQAIIDKLDLQRPIFK KTAAYGHFGRNDQDFTWEKLDQVDKLKNK >gi|325481747|gb|AEXN01000002.1| GENE 65 65331 - 65678 467 115 aa, chain - ## HITS:1 COG:CAC0434 KEGG:ns NR:ns ## COG: CAC0434 COG0245 # Protein_GI_number: 15893725 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Clostridium acetobutylicum # 1 115 1 115 155 155 68.0 2e-38 MRIGLGYDVHKLVENRKLILGGVEFQYEKGLLGHSDADVLVHAIMDAILGALNLPDIGNL FPDTDDEYKDIYSIELLDRVVKLMEEKSYKIGNLDTVIICEMPKISPKREEIQKN >gi|325481747|gb|AEXN01000002.1| GENE 66 65679 - 66368 288 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 5 227 2 223 234 115 34 1e-24 MIDEKKISAVITAAGNGLRMKSDKAKPYIELKGRKILEICLDIVVSLEEIDQIIVVIRKD DEDYLKDIIKKYKKKISYVFGKETRELSTYEGLKAVDKDSKLVLTHDGVRPFASKKLFKN IMYELREYKAVISAVKSKDTVKIVGDDLLVKNTPLRKEVYNVQTPQAFDKDKILSYYEKY TKSDLTITDDSQLFEIFSKEKIKVVEGEYSNIKITTPEDLIFARGFLED >gi|325481747|gb|AEXN01000002.1| GENE 67 66370 - 67479 788 369 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 [Bacillus selenitireducens MLS10] # 1 368 26 391 397 308 45 1e-82 EKNMFNRIFRIMFSVIGAILGISVVKLVLSVVDFTIDSSVFFIAANVLIALIFAGIFYFL SGFIYKMMENIFMNLEKYLEDLPPLSVAVGISGVIVGLILAFLATKPLSSLSLPVVGNSI FVLLSIIIYLGFGLLGWRIASKYPDKYPQIFQKVKEVKKPNRKENKKEISKDTSLKLIDT SVLIDGRILDIIRINFIEGKLIIPEFVLEELQHIADSPDDLKRERGRRGLDVVKEIKKNK DINLEISSKDYPEIKEVDSKLLKYAQDTGAKIFTNDYNLNKVADVQGITVLNINDLANAM KTKVLPGELMEIEVIKEGKSRNQGVGYLEDGTMVVVEDGKDLIGKKINSTVTSVLQTSAG KMIFVKAKE >gi|325481747|gb|AEXN01000002.1| GENE 68 67491 - 67970 647 159 aa, chain - ## HITS:1 COG:MT3689 KEGG:ns NR:ns ## COG: MT3689 COG1329 # Protein_GI_number: 15843196 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium tuberculosis CDC1551 # 1 158 2 159 162 129 37.0 2e-30 MFKIGDKIVYPMHGAGVIDSVETKEFLGEEKEYFILKMPIGNMDISIPKSNINKMNIRDV ISKEEGEKILAILDEKPEDLNGNWNLRYRENQEILKTGDIFKIANMVRDLVALDDDKGLS TTEKKLLNRARRIMASELVMSGSLEKDQAEKMIDESIGL >gi|325481747|gb|AEXN01000002.1| GENE 69 68052 - 68990 1089 312 aa, chain - ## HITS:1 COG:BS_yerQ KEGG:ns NR:ns ## COG: BS_yerQ COG1597 # Protein_GI_number: 16077740 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus subtilis # 1 274 1 276 303 178 35.0 1e-44 MKKLLYIYNPMSGQKTIGSHLSEIVEYFSKNSYFPTVYATQKANDAREKVKEFAKDYQEI LVSGGDGTLDEVVSGLLKSQEKSIIGYIPTGSTNDFSRSLKIPTDIKKATKLAVKGEVMD IDVGQFNSKFFTYVAAFGSIAQVSYETDQSMKNIFGRFAYLLEGVKTVSNLKAYKAKISV DDEVFEGEFIHFMATNSVSVGGFNNFYKKNIGLDDGVFEAALIKKPKGLIELNQIIDGLR SKKENDNVIFRSGSVFKVESDEKIDWTLDGDFGGSYKKSEIKVLNRAVKMRCGFAKNSKE LLSNKKMIDKRL >gi|325481747|gb|AEXN01000002.1| GENE 70 69147 - 69695 569 182 aa, chain + ## HITS:1 COG:CAC2928 KEGG:ns NR:ns ## COG: CAC2928 COG3859 # Protein_GI_number: 15896181 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 3 159 40 186 210 77 32.0 9e-15 MEKNNTRFIVEGGVSIALSFILSFVVLFRMPLGGSVTLASRLPLVIFAVRWGLKKGLWAA LIFGILNMVFGGYVIHPAQAILDYILSFSAIALSGISFGKSKTKFSYIPSIIISYLVSGL FNVISAFIFFNDMATAKAAGFNNFTLYAFAYNYSFLAVDALILIVVFLLIYDRLKMFLNK QK >gi|325481747|gb|AEXN01000002.1| GENE 71 69928 - 70659 904 243 aa, chain - ## HITS:1 COG:SA2435 KEGG:ns NR:ns ## COG: SA2435 COG1482 # Protein_GI_number: 15928228 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Staphylococcus aureus N315 # 5 243 3 247 312 219 47.0 3e-57 MEKVLFLKGEFVEKIWGGKRLKKDFPYQFESENIGEYWAISAMKDFPSKILNGKYKGENL GFLYKNHKEIFGNEKKEKFPLLIKLIDAGDDLSIQVHPDDDMAKKENSYGKSECWYILNE DEASIIYGLKTDDKNKALKMIDNKKWEELLNVEKSIKGDFFKVPAGMVHAIKKGSLILEI QQASDLTYRLYDYDRVDKNGNKRDLHLEKSKEAIKCLDTEKTHENLEEKMEILYDNEYFT VKK >gi|325481747|gb|AEXN01000002.1| GENE 72 70725 - 71537 921 270 aa, chain - ## HITS:1 COG:no KEGG:Apre_0171 NR:ns ## KEGG: Apre_0171 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 269 1 253 254 74 26.0 6e-12 MSKLLKHQLKENIRDILPWIIVPIILSIVLNFINSYLDSAFLDFFTVLSMLLMYSSFAVS MIIVILNDYKKFYGDQAAFYDVLPVKSKDVTTSRILNIMIIAILAGFIFLLEFFGSFLIT TGARGEEISLIFRQIKTVLGQFPTKTIIIFMITVLTSLLATLTRILASISIGSSKTFKDL GKFGPVLVFILITIIISILGLTFGVKFLETFSVNVSKSSSQIQNGLYLSNVESVEELTRI MGLGTILNTVVSAVQIYLTNFFHKNKLTVA >gi|325481747|gb|AEXN01000002.1| GENE 73 71530 - 72219 212 229 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 2 202 5 214 311 86 26 8e-16 MLEIKNLTMSYKNKLVLDKLNLSFEKGKVLGLLGPNGSGKTTLLRILAGLEKNYDGEVKI GGEDPNHLTKSFVSYQPDHLPLDKSYNLVKISNLYGEFFEDFSKEKFEKIIRDFKLDMNM KIKNMSKGMKDKVQIALSLSRKSDLYLLDEPMSGIDPASRKKIMDVIIDNFDSEGLMIIS THLISQIERLLDEVVFISDGKIILEENIDDLRQKHKMGVEEYFEEVFNV >gi|325481747|gb|AEXN01000002.1| GENE 74 72219 - 72578 337 119 aa, chain - ## HITS:1 COG:SP1714 KEGG:ns NR:ns ## COG: SP1714 COG1725 # Protein_GI_number: 15901548 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 3 107 5 109 121 96 46.0 1e-20 MEFDNDRPIYLQILEDFKSKISSGIWSPGEKIASVRNLAKFYEVNPNTVQRALAELERDG LCKSQRTAGRFVTDDKDLIKSLSKNAFEVICEDFIANAKNLKISKEDALDGLDKFWEVD >gi|325481747|gb|AEXN01000002.1| GENE 75 72579 - 72842 322 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325845855|ref|ZP_08169053.1| ## NR: gi|325845855|ref|ZP_08169053.1| hypothetical protein HMPREF9246_1597 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1597 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 87 1 87 87 142 100.0 9e-33 MGILKIILPIFLLGISLIFLIKKLDKNYKNEKEKNLENNGNYLAEGIGLGIVFGAAFGSL FDDMGYWISVGMLLGLTIGQAIEKKEA >gi|325481747|gb|AEXN01000002.1| GENE 76 73547 - 74620 1552 357 aa, chain - ## HITS:1 COG:L157995 KEGG:ns NR:ns ## COG: L157995 COG3595 # Protein_GI_number: 15673888 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 325 1 353 371 62 24.0 1e-09 MNEEKKMILDMLKEGKITVEQASDLLEAVGKDKSKNNDESFVNKLSTSFEKIMKKTSETI SNFDFDFDLDSVSIPNIYHINSQKSENQTKIDDDINEIEIDVTNASFEIGRAQENHILVE QKVYYKNKEDMDKEYLNIEVVDDKLIINTKEEYKFLDASANVKLYLGKNLYDKIDVNIVN GQVELCDVDFKENNMESINARLTVINSAGNIDLKNTNGRIEIRNTNGDIEVSNVNGSVYL TNVSGSKADINLVNGSIRVDGLNIEDINLSSKSGSIRIYKIIDSKEINIDTKFGSVVVDT NEFGKNIKALIKASSYSIADKFKNKLQKENGYQVSTNPEENDLNIDIKSGFGRVSIR >gi|325481747|gb|AEXN01000002.1| GENE 77 74613 - 74969 415 118 aa, chain - ## HITS:1 COG:CAC3001 KEGG:ns NR:ns ## COG: CAC3001 COG3877 # Protein_GI_number: 15896253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 114 5 122 131 101 44.0 4e-22 MINKCPNCGDDLIITSYKCKSCLTEVSGEFEMDKFQRLDLEDLEFVELFLQKRGSIKDVG ESLGISYPTVRNRIDKIVKKLGGKIDKKESRIDILNMVDRGEITPDQASELLKELKDE >gi|325481747|gb|AEXN01000002.1| GENE 78 75153 - 75845 552 230 aa, chain - ## HITS:1 COG:no KEGG:Apre_0161 NR:ns ## KEGG: Apre_0161 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 230 1 230 230 132 32.0 8e-30 MRSLLKFMVYALIIIFIPSFIMMFVTSMGFDNIYLVLLGQILIFIILMGSYFLTRKNIVK YENETLKLIEHEDDIEKLKELRDKRISYKSKANISKKIIDLYYSKEELSKLRKYSSTYDD WIFYYASLIKNERDDRELYKKKRDNFIKRYKNRHFIFLDYAENMRTSIKWIIIFLVFSLI SYLNPYKFIKNPNLYTMALLLNFTLNFGLMVNTVIWIIRSLKSYWARKII >gi|325481747|gb|AEXN01000002.1| GENE 79 75842 - 76849 1018 335 aa, chain - ## HITS:1 COG:SPy0515 KEGG:ns NR:ns ## COG: SPy0515 COG0438 # Protein_GI_number: 15674619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 331 1 331 332 278 43.0 1e-74 MKVLIYNEDYQTVKESGVGKAIDHQKKALELAGVSYTLNAKDDYDICHINTVFPKSASFA KKAKRVGKKVVYHGHSTEEDFRNSFIFSNQLAPFFKKWLIHCYKKGDLILTPTAYSKKIL ESYKMDREIKVVSNGIDLDFWKEKKNDRENFYQRYDLDKNKKSIISVGLFIERKGILDFV DLAKKLPQYEFVWFGELNLKLVPEKVRRAVETKLENLHFPGYVDQNLLREAYSGSDLYIF PTFEETEGIVLLEALATKADIIIRDIEIYKNLKEGENIYKAKDFDEFYEKIKLIMEGDLP PLKEKAYLIAYEKSLENVGKKLKKIYEELLERDEK >gi|325481747|gb|AEXN01000002.1| GENE 80 76846 - 77985 1115 379 aa, chain - ## HITS:1 COG:CAC3594 KEGG:ns NR:ns ## COG: CAC3594 COG0438 # Protein_GI_number: 15896828 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 1 374 1 380 398 277 41.0 2e-74 MKILITSDWYYPVVNGVVRSILNLKSYLEGRGFDVRVLTLSNSTESYKKDKVYYIGSLGA GKIYPEARISATLRNKFIKEIKEWKPDIVHSQCEFSTFMMATKIAKKASCPIIHTYHTIY EDYTHYFSPSKKVGKKVISVFSKAIADRTDYIIAPSKKTLEILKSYDIEDEKIQIIPTGI EMPEKLDDKYKLRDYYGFDKNDKIILYLGRLAEEKNIEELIDYYGKINMDKLKFILVGGG PYLGHLKKYSEKIDKRIYFAGMVRPEEVNNYYRMADAFVSASKSETQGLTYYEAMSNGTL AICRKDLCLDHVIIDGFNGYQYKDFFDFEKFLQIIFLDDKKREELSKNARAYALENFSID SFGKKCEKLYKKALERDVR >gi|325481747|gb|AEXN01000002.1| GENE 81 78120 - 78491 239 123 aa, chain + ## HITS:1 COG:no KEGG:Apre_0158 NR:ns ## KEGG: Apre_0158 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 116 1 116 116 115 58.0 4e-25 MGNLIVGDVLLLFFSIYVGIFFKKFHTSYPKMKVGFHIWEVCYNKQCWEYGNNFVGNLSI LLGIILFGIIYPIILYFKVRRNICVILLILFTILYFILLLSILRYHMRKKFNLKDEKDDE DKK >gi|325481747|gb|AEXN01000002.1| GENE 82 78526 - 78975 518 149 aa, chain - ## HITS:1 COG:SPy1738_2 KEGG:ns NR:ns ## COG: SPy1738_2 COG3444 # Protein_GI_number: 15675587 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Streptococcus pyogenes M1 GAS # 4 145 5 151 161 59 27.0 2e-09 MKVRIDERLEDAQMIKSWAKFLKAKKIIIANDEIEKMDLEKEIIRMGLDHIRVDFIQVEK LKDKLENEDNKESLIFVKKPEDLKSLEDDKISSIELGFMAFKEGFKLLSENCYVCPKDLK FFKEIMDKGVDIFMQDNPYSTKKNINYFI >gi|325481747|gb|AEXN01000002.1| GENE 83 79080 - 79961 1376 293 aa, chain - ## HITS:1 COG:CAC0674 KEGG:ns NR:ns ## COG: CAC0674 COG1760 # Protein_GI_number: 15893962 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 21 286 22 287 290 221 48.0 1e-57 MKTTMEYIKNRIKEENKEVWEIALEDEMDLTGKSKEEVFALLQKSLDVMKESSKKALDKK LMSMTKMTGGNAKSMNNYFLSEDTIMGDLPTKAMAMAFSTSEVNASMGKIVASPTAGSAG IVPASLMAMREKYGYSDEELIKAMLVATEFGQIIADNATFAGAEGGCQAECGSAAAMCAA AICYLRGADINVMEDAASIALLSIMGLVCDPIGGMVEFPCNIRNASGVINALSAADMAIA GVKVLVTFDETVDALKEVGDALPASLRETGDGGVAACPSAIRLKKKYIDKEEV >gi|325481747|gb|AEXN01000002.1| GENE 84 79965 - 80621 985 218 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 1 214 1 217 227 186 45.0 3e-47 MANLSVFDIIGPVMIGPSSSHTAGANRIAKIARDLGGEGFTKVDFYLHGSFAKTYQGHGT DRALVGGVLGFGPEDERLRDSFEIADEAGITYNFIPQDMGDVHPNTVKIILHYSDGHEFK LRGSSIGGGNIMINQIMDNDVEYNGKNPTIICTYPEQKGMIAFISNVLFDHNYNIKNMKT MHKGGIIMLIVELDQDLEEDVYKEIEAGKNFEFIKYLG >gi|325481747|gb|AEXN01000002.1| GENE 85 80621 - 81268 705 215 aa, chain - ## HITS:1 COG:TP0554 KEGG:ns NR:ns ## COG: TP0554 COG0546 # Protein_GI_number: 15639543 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Treponema pallidum # 3 209 9 216 222 130 33.0 2e-30 MYIFDIDGTLLYTIDSIAYNINQTLKAYGLKEVPTDKIREFVGNGPKVLIEKTLDYIGFE KSEKREEILNSYNKRYDDNPSYLTKPYDGIVEELEKIKKRGELLVAFSNKPDSTCKKVIG DVFGEGYFDFILGYRKDIERKPSPEGMYIIKERFGVDFSDIIYFGDSEVDMKCGKNAGVF TVGCSWGFRDRKILEDLKPDSIIDKPSEISKIRRV >gi|325481747|gb|AEXN01000002.1| GENE 86 81387 - 82829 1666 480 aa, chain + ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 476 9 485 489 590 60.0 1e-168 MKERRNLSMLSDFYEFTMAYGYFESGMKDTIAVFDAFFRKNPDEGGFSIFSGLDDIIDYV ENIHFDDEDIEYFRKNTNFSEEFLSYLKNFKFTGDIWAFPEGSAIFPSEPVVTVRAPIIE AQILETYLLLSLNYGSLVATKTNRIVRAAKGRTVMEFGARRAQGPDASVKGARAAYIAGA PITSNTLSSQMYDYPAGGTMAHSWVQSFDSEYEAFLAYAKLYPDNCILLIDTYDVLKQGL PNAMKVFKEVLDPLGISGGVRIDSGDIAYLSKECRKILDENGYKDAKIVASNSLDEYKIE SLLQQGAEIDSFGIGERLITAKSDPVFGGVYKLVEIEDEKGKTAKIKVSENVEKITTPGL KEVYRLYDKKTGKAEADYITLKDEKVDDSKPLVIFDPHFTWKMKRMENYEIRKMQVPIFK NGKKVYESPKIDQINEYCKAEVKSLWDEVKRFDQPHNYYVDLSHDLWNLKQNLIMKAMSK >gi|325481747|gb|AEXN01000002.1| GENE 87 82829 - 83572 835 247 aa, chain + ## HITS:1 COG:CAC2992 KEGG:ns NR:ns ## COG: CAC2992 COG0300 # Protein_GI_number: 15896244 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Clostridium acetobutylicum # 1 237 1 237 262 122 35.0 5e-28 MIAIITGASSGIGYEFARQIDKKNYEEIWLIARREDKLKNLSNKLKTRARIFALDLCEEK SFEIIRKELKISNKKIGLLINSAGMGENDYFKNTKLEKDIKTLNLNIKALTAMTKISLEF FQKDGIILNIASSAAFIPQAKFALYAASKSYVLSFSRAIRREFKDIKVSVLCPNRVETEF LKKSKNSSTGIKNLGNENLEKMVEKTIKKMGKKDLITSHPTAKILLIISKLLPHSFILWA EGFLGLY >gi|325481747|gb|AEXN01000002.1| GENE 88 83671 - 84606 1610 311 aa, chain - ## HITS:1 COG:BS_rbsB KEGG:ns NR:ns ## COG: BS_rbsB COG1879 # Protein_GI_number: 16080649 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 10 309 8 301 305 286 51.0 5e-77 MKKFRKLLAVLAIAIFTFTACSLEGQDTKDNSSNTKKEEKAKDGKLKVGVSLSTLNNPFF VSIREGVEEAAKDKDVETVITDAQNDSSTQNNQVEDLITQKVDLIIINPVDSTAISSSVK KANEANIPVICVDRGSDEGEIVSFIASNNVEGGKLAGEFILEKAGKDAKVIQLEGIPGAS STRERGEGFKKATDGKIDLVASQTANFDRAEGMTVMENLLQAQPDVKAVFCQNDEMALGA SEAIKASGKDIVLVGFDGNEDAINAVKEGSMTATVAQKPKEMGKIALETAVKYLKGEKVD EKVDSPLELVK >gi|325481747|gb|AEXN01000002.1| GENE 89 84616 - 85560 1226 314 aa, chain - ## HITS:1 COG:BS_rbsC KEGG:ns NR:ns ## COG: BS_rbsC COG1172 # Protein_GI_number: 16080648 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Bacillus subtilis # 12 313 20 321 322 312 61.0 5e-85 MTNIKNRFKENQNLGTILALIILICFVSLLNPAFLQVSNLLNLMRQLIINGFVALGMTFV ILTGGIDLSVGSTLALSSAIFAWLMQSGISTIFAIIVAILLGVLLGLINGLLITKGKLAP FIVTLATMTIFRGLTLVLMDGRPIAGQRDDFVFQFLGKGQIFGIPFQVILFIIVYLILWM LLNKTSYGRKIFAVGGNEKASFISGINIAKSKTFVYIISALMAVLSGLVLTSRLNSAQPT AGSAYEMDAIAAVVLGGTSMTGGSGSLTGTLIGILILGVLNNGLNLLGVSSFYQQIVKGI VILIAVLIDRKRNK >gi|325481747|gb|AEXN01000002.1| GENE 90 85557 - 87038 206 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 258 470 9 217 245 84 26 4e-15 MKIEMKDIYKSFGKNDVLKGVDFTLNEGEIHALVGENGAGKSTLMNILSGVLPKDKGEIL IDGKKVEINTTNDAKKYGISFIHQELSDWPELTVMDNIFMNNELRKGIFLDKDAMRKKSI ELLKRFDLDIDPDTKVSKLSVGQRQMMEIAKANLNKVNVLILDEPTSALTNNEIDKLFKL IKRLRDQKVSMIYISHRMEEIFSLTNKITVMRDGKSVSLMDTNKTCEKEVVSAMVGRDIG DFYPQMDAEISDVKIEIKDFTRKGYFENINIKAKKGEVLGISGLMGAGRTEIMRSVFGLD PKDKGEVFIDGKKVEINKPIDAIKNKIAFVTENRQEEGLVLDESIRENISLLNFDKFSKN SFIDKKKEKNLSDSLVESFKVKTQSSEAKVSDLSGGNQQKVVFAKWYAINPEILILDEPT KGVDVGAKREIYDLIKDLTKKGVSIILISSDLPELLSLSNRIYVIYEGKMQGEISSENAN QEKIMTLATGGKI >gi|325481747|gb|AEXN01000002.1| GENE 91 87048 - 87440 470 130 aa, chain - ## HITS:1 COG:L85737 KEGG:ns NR:ns ## COG: L85737 COG1869 # Protein_GI_number: 15673620 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type ribose transport system, auxiliary component # Organism: Lactococcus lactis # 1 126 1 128 132 120 54.0 5e-28 MKEKGILNSEISKRLSDLGHTDLIAIGDCGLPIDPDKKIDLALKLGEPKFIHVLEVLLED FGCEYYYLAEEIKENNPKQEEDIKNLLPDCDSSYISHEDFKKKLKDVKFVIRTGEDTPYS NIILRSKNIF >gi|325481747|gb|AEXN01000002.1| GENE 92 87437 - 88330 1000 297 aa, chain - ## HITS:1 COG:SA0258 KEGG:ns NR:ns ## COG: SA0258 COG0524 # Protein_GI_number: 15925971 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Staphylococcus aureus N315 # 2 289 4 301 304 145 35.0 8e-35 MKILNFGSLNIDIFFRVEEIVKPGETISAKSIEKRPGGKGLNQSVALAKSFDKVYHAGSV GGDGLYLIDYLKKENVDTKYIKQSEKLTGNAIIQVDDKGENSIVLYKGANFDNDEEFIDK VLDDFGENDVLVLQNEINSMKYLIDRAYEKNMKIVLNPSPITDRIKEFDYEKIDLILVNE HEAASISRKKTNDEKIAYFKNTYPNLKVVMTLGSKGSIFIAKDEKIKQDSFKVKALDTTG AGDTFTGYFVSYFYQGKDVKEAMEIASKASALSVTKKGASISIPSLDDVKNFERSDV >gi|325481747|gb|AEXN01000002.1| GENE 93 88317 - 89318 836 333 aa, chain - ## HITS:1 COG:CAC0360 KEGG:ns NR:ns ## COG: CAC0360 COG1609 # Protein_GI_number: 15893651 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 328 1 328 328 169 31.0 5e-42 MATIKDVAKLAGVSITTVSMVLNKTNNKISDQTRKKVIDAAESLNYKANNFARALASKKS NVIMAIIPDISNPFFSLLVKNLTYYAEKYKYFLYIHNTNNKDLDKGKFLNILNSNFVAAS LIVDRNVKNLDQDLIEKNNIIFLDEVDFNNNSYHMVTGNNEKGGLLGMEYLIDKGFKNIG ILIGPRSTANSSRRLSGAIKAAMNKDIYIDSSNIIHGDYTFEGGYKAGKYFLKKNIDAIF SFSDMSSYGLLKFFSENKIKVPDDISLISYDNLFLNNIVSPRLTSIDQNLEMIAKYSIKM ADDLIKNKKVDRKVMVEPFINFGESVGDKNEDT >gi|325481747|gb|AEXN01000002.1| GENE 94 89624 - 90259 483 211 aa, chain - ## HITS:1 COG:L0467 KEGG:ns NR:ns ## COG: L0467 COG2801 # Protein_GI_number: 15672121 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 60 210 112 257 272 144 54.0 1e-34 MAKYSTEFKMRIVKEYLKVNISFKNLAKKYNISHQEIVKRWVNAYKSQGYEGLKVKRQNT QYSLEFKYLEKDKTGTYQIKKLYLNPYLDMYKSEILSYEISKHPTIEPILKALDKAIKVT NKTKEKRIFHSYQGWAYHVKQYTSKLEANSITQSMSRKGNCLDNSPMENFFGILKQEIYY GRKFYSYEHLKQTIEDFIKYYNEKRIKEKLG >gi|325481747|gb|AEXN01000002.1| GENE 95 90354 - 91733 1360 459 aa, chain - ## HITS:1 COG:RP307 KEGG:ns NR:ns ## COG: RP307 COG0531 # Protein_GI_number: 15604176 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Rickettsia prowazekii # 6 408 23 431 470 63 24.0 6e-10 MAKNEKKLGLINVIGLGVGGAIGSGIFVTLGSAMSRTGRSILPITIICVFYMLLAYWYNL GMSTVFVVKGGDYSMKGMLLPPILTGFGGWTNVIWAFGCTGYALAISQYLGDLWPLFNEY SKISSAIILTIFFLLTIKGNSFVAIFQNVVTFLLIFALILFVVLGIPSVDTSKFFDMNYD GGFFYNGLSGVISAIAIMAWACQGTTMGPVGVVPNTKNPKRNIPLGIILTCLVVSAVYGL MSFVASGVLTYDQYAGENLSVTARAIMPQGLFTFFVIGGGICAIISSFLSVLIMIRYPLS KMADDGWLPNSFKKKSADGYPYYCYLLVYIVALVPILIGMNVDNAISMLMIPTMIINIYL NTKCMMIPSKYKEQFENRSIKIPKWLFILASVLGGVCSAIIAITLFKDLNFHNAIIAAAV VIFPLLFSWLALKSGSVSRKHLDKEREKIIEDALKHDQV >gi|325481747|gb|AEXN01000002.1| GENE 96 91763 - 92989 1487 408 aa, chain - ## HITS:1 COG:YPO3006 KEGG:ns NR:ns ## COG: YPO3006 COG1168 # Protein_GI_number: 16123185 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Yersinia pestis # 2 396 3 389 393 252 35.0 1e-66 MYNFEKIIDRTKTNAMKLEGYKSYIFDADDSLELPFKDDEFIHMWVADMEFAVAPEILSA INQRLGREILGYTANYDDSLYKALRRWCKDRYNWDIKQEELVTSDGVIPALERLISYVVK PEEKVVFNTPGYGQFAMCAERAEREYLTTDLIYNGDGTYDFDFEDLDKKLAREDVSMFIL CNPHNPTGRIWTIDEMEKIAKLVKKHQVFLISDEIHCDIRRKSAPKHIPMAKVMGDYAKM ATCMAASKTFNLAGLQQSAIFIRDKEIREEWKSKYMGFLNPLSLEATIAAYNQGGKWLEE MSDYLDENFKFMENFFKENLKDAIVTKSQTTYLGWVDLSKYFEKDEDVELFFAKVGGILL EADKSFVGHANRMIRLNLACPRSYLKKGLERIADALLNKHDEKFTDKR >gi|325481747|gb|AEXN01000002.1| GENE 97 93207 - 93917 555 236 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0216 NR:ns ## KEGG: HMPREF0868_0216 # Name: not_defined # Def: DNA-binding helix-turn-helix protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 2 236 7 243 243 148 36.0 2e-34 MNIDYNKEVGKLIKAYRKLRKLTLEELAKKIYKSKSTLSKYENGQIQIDIDNLYLIADAL DIRVDKLLYNDDQILISDESKNVPKFFKNLTEFYSYMYDGRVNKVIRSKLNILSKIDNNK YRIMMYMNYKNEKSYQVCENTYFGFIEHFDAKTNINLTNKDTHMEKAIIQILASFLNSET KWSLWTGFSSRPMMPISTKMLISKKSIEIDRNFENILKISNEDIRLLKLYNMFAVT >gi|325481747|gb|AEXN01000002.1| GENE 98 94239 - 94943 502 234 aa, chain - ## HITS:1 COG:FN0028 KEGG:ns NR:ns ## COG: FN0028 COG3666 # Protein_GI_number: 19703380 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 5 222 240 443 491 131 42.0 1e-30 MGDYKNSYSKTDHDATFMRMKEDHIRNGQLKPAYNIQLASASGFIIGENISNHPSDMYTL KPFLNKLLEVYPNKLNKIVADAGYEIEENYVYLAENKLSSYIKPSNYEQLKTRKYKKEQE FRSSLKYDKTSDKYISEEGKEFIRCKDRYDTKKSGYVSISKVYRCFDWNKDGQKTKGIYI AETFQKYRKESLENIRSDQGIEERINRSIQAEGAFSKIKSELNYTDSTTEEKQI >gi|325481747|gb|AEXN01000002.1| GENE 99 95501 - 96874 1706 457 aa, chain - ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 456 1 457 458 328 38.0 1e-89 MAKLKKAFECKNCGHTQGVWAGKCPECGKWGTLVEKTVKKESSSKNPISLDFDNEARLLK EIKLDQSERIKSRFEEFDRAIGGGLVKDSVSILTARPGAGKSTLLLQLSSSYAKDGFKVM YVSGEESESQIKSRADRIIGEISPNIWILSTNSMDLAEIEIKKKDADIIILDSIQTFALN EFDNKQGSPTQTIECANKCVDLAKNPEKKRAFIMVGHMNKTGEMAGLRTLEHLVDTVLLL DGENEDDLRLLTSTKNRFGPTGEVGLFSMQEEGLIEITNPSEYFITERDTEVEGSAISVM KEGTRLLEIEIESLVSKSFMPYPQRIGDSLRKDDLNTLISILQERAGINLFDENVIIKAT GGLKMREQSVNLAIMISIASSYLKKPIDNKTVFIAEVGLTGELKKVPQIKSRLKELERLG YKKAYIGKSQIDKKEFKNLQIKEMKNIKEVILDVFGK >gi|325481747|gb|AEXN01000002.1| GENE 100 96861 - 98177 1500 438 aa, chain - ## HITS:1 COG:CC3414 KEGG:ns NR:ns ## COG: CC3414 COG3572 # Protein_GI_number: 16127644 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Caulobacter vibrioides # 4 414 8 436 453 180 30.0 6e-45 MNYQEKKDKIVAYIKSGESQKENFKMGLEMEHFVIDKKELFSYDYFGKKGVGASLKELNQ MGFEITNEEEGYILGLRQDDIAVNLEPAGQFELAIDAKKNIKDLDESYKKIMTEIIPIFE EKNQYLETLGYHPKSKIMDLDIIPKDRYKYMQKYFTDFGGKYALNMMRGTASVQTAIDYC DEDDFKKKFFVANALSAFMYSLYDNAYIFEGEVYKDRNLRQEIWEYCDKNRTGVYDFAFD EDMGYEKYAEKILDTDIIFVHENGKDVYKADTKFEKIMDEDFSDEMIFHALSIVFPDVRA KKYLEIRMPDAVPYPYNISFPALLKGLFYNEENLNKLREDFKDMTYEACQKLKDDTKKYG LDAKYQGKSVCSWIKYFISLSKNALSDEEKSYLTCIEKLMDEKETLRDKFEIIYKEDPKK ACKRFSVNYAVGEFNGQA >gi|325481747|gb|AEXN01000002.1| GENE 101 98340 - 99011 652 223 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325845979|ref|ZP_08169177.1| ## NR: gi|325845979|ref|ZP_08169177.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 223 1 223 223 376 100.0 1e-103 MIKKIFIGLSLLIFLTGCGKSSKRSDDSVEIYNKASLENKDNNLNSNEKSNTKEAVKKVK DPYQEIYKQIEGIKFYLSGGSEMESIYFYKDGYFDGALKTGDGYEIKQAFYNGKFDIVEK IDHTSYKIKLVRLDYDSKTGEKSSKNINGTNFQITNIKTDLFDNENKNYILHLPDTKTAS LNEDIITGMKMAGNNYGQDKIGIFLLTKEVSEGESFVMSQYKK >gi|325481747|gb|AEXN01000002.1| GENE 102 99023 - 99742 826 239 aa, chain + ## HITS:1 COG:no KEGG:Bfae_30500 NR:ns ## KEGG: Bfae_30500 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 76 206 1027 1150 1181 72 32.0 2e-11 MKFTKKLGLILGFIIFIPSITHASKLVDIKEIRGDKNHYMDFLFNNTEMVCDKNDLQGKS QENSQEKSEDNKRWEGDILKELSGKSFSFYSGSGAWMTNLTFTDEKGNFEASFSDSDIDQ VQGAKCVGKFDLVKRIDDTSYKLKLSNVKTTSKIGETYVDGKLNIGKKVPYGFETLENPD EYSNSFTLYLPKRLKSQIDENVYAWAYNVTDHAYIDDYQSRIFILANDSTKAGFAENIN >gi|325481747|gb|AEXN01000002.1| GENE 103 99769 - 100215 695 148 aa, chain - ## HITS:1 COG:no KEGG:FN1065 NR:ns ## KEGG: FN1065 # Name: not_defined # Def: hypothetical protein # Organism: F.nucleatum # Pathway: not_defined # 18 148 1 131 131 133 67.0 3e-30 MKFKEKIYVLAITAAISVIANWIGPGISPLKGIPGVLILALISIAGIGISEIMPGKIPAV AYIVTLATIVTIPAFPFSEFISYHTGNVDFTTLCTPILAYAGIYTGENLDNLKKTGPKII ILAIFVILGTYLGSAIIAQIILKMLGRI >gi|325481747|gb|AEXN01000002.1| GENE 104 100218 - 100985 1093 255 aa, chain - ## HITS:1 COG:no KEGG:CbC4_0319 NR:ns ## KEGG: CbC4_0319 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_BKT015925 # Pathway: not_defined # 1 252 1 252 272 316 68.0 7e-85 MKKYKLHIIALGVVLVSELIGKHTFDIGIGTIVLLPMLFALIIGIFTTPKFLKISGEKEM KEAGRLISVTLMLLMAKYGTTIGPTIDTVIKSSPALILQEFGNLGTVFLGIPLGIFLGLK REVIGGAHSISREPNVALIAEKYGLDSPEGEGVLGVYIVGTVFGTIFMGIIASLLATSTP LHPLSLAMASGVGSASMMTASVGSLVELYPNMANEITAFGAASNLLSGLDGVYMSVFLAI PLAEKIYSKMMKKRS >gi|325481747|gb|AEXN01000002.1| GENE 105 100982 - 102175 1764 397 aa, chain - ## HITS:1 COG:FN1063 KEGG:ns NR:ns ## COG: FN1063 COG1473 # Protein_GI_number: 19704398 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Fusobacterium nucleatum # 1 393 1 394 394 437 56.0 1e-122 MNCLKRAKEIEDVIINDRRELHKIPELQLSLPKTVAYVENELKKLDISYKKLVDGNAIVA EIGNYRGKCIAIRADMDALPIKEETSLSFCSTHEGKMHACGHDGHTAMALGACRILKENE KNLDGLVKIFFQPGEEIPGGAKPMIDEGCMENPKVDRVIGLHEGGIFGHLPTGTVGYKED AMMASMDAFILKVKGHGGHGARPENFIDPIVTISEINLALQKIISRELDPTKSALISICQ IHGGTCQNIIPDEVWEEGTVRTLDEDVRDFVEKRMKEISESIAKAFRCEAELDYKRYYPA VINDKEFTAYVKNIAQEILGDDKVIEISRPTMGGEDFAFFEKEARGTFLSLNNLKANKDG KVYPHHNSKFDVDESAFYIGSGLMAEVAYRYLKEGSK >gi|325481747|gb|AEXN01000002.1| GENE 106 102309 - 103313 1241 334 aa, chain + ## HITS:1 COG:no KEGG:Bfae_30500 NR:ns ## KEGG: Bfae_30500 # Name: not_defined # Def: hypothetical protein # Organism: B.faecium # Pathway: not_defined # 157 287 1020 1135 1181 82 37.0 3e-14 MKKKLTLIFAMSLLLSSCGGSMVKVNQGEIAKNKAELEAKNQKREVEGLEEDKSDEKKSK KDKNKKKIKLEEDNKKDKKTKKDKKEKDSDKKLVKNNNKNKKDSEPTRNNNTNTKRNNDT NNNKGVNNNNPRENKEEENNSQNQNTQNKSYVSFKNPDTSNNSGNYPEVLRDLNGKKFVF SSGAGGWQTVLNFSQDGNFTAKFEDYDLDSVAICEFNGKLSIDSKVNETAYILRLDRAEI TTPINTQEVKNIGGKDMTVRYVDLPYGFAVNNDTDHSFQGMFSLYLPLRKRSDMSAEVNH WLDITGEKNVEKDISRIYLLVNNKTIDTFREKVE >gi|325481747|gb|AEXN01000002.1| GENE 107 103313 - 103756 479 147 aa, chain + ## HITS:1 COG:MYPU_0950_2 KEGG:ns NR:ns ## COG: MYPU_0950_2 COG0350 # Protein_GI_number: 15828566 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Mycoplasma pulmonis # 12 143 15 155 161 105 46.0 3e-23 MKAYYKKENLIFEIGYDRKIKSIKIVEKEKIGAKSPLSNLAFKEISKFLDGKLEKFSFEI APQGTDFQKRVWKEIEKIPYGKTLTYKEIGEKLNSKAYQAIGTACGKNPILFRIPCHRVV GKNNLGGFFYGLDLKKNLLKMEKSCKF >gi|325481747|gb|AEXN01000002.1| GENE 108 103925 - 105013 1603 362 aa, chain - ## HITS:1 COG:no KEGG:FMG_1107 NR:ns ## KEGG: FMG_1107 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 361 2 325 325 278 48.0 2e-73 MKKILTAAIASVMIFTTVAPSIAYAKEGLEVSENYQNEEKVDQNLEVNSNENSNEEVENT NQGEENTEENQKAEAPKLEISDAQEFKKQLSGMRDDVLNIQTNKEIQEEMKADYNEKSLE IEENIDKMSVGAIGFANIYDLDSIPDRIMLLGRLGVAIRFATTELRYKVDAAHTEIAEYV FRGLVIAASPFHTREDMKVYMEEFEALKQKLLSYPDITLEDTANLYVRSDLDVKLNKARF MKFNDLKNKSTDVIKELDREIARITNIRLKPQTTVKEIYQASDELDQAVAKAINSKEFKA PNYIIKEAKEWRAKAKKAVRDGDKRREVAKAIEETNDELLKTRPSQPKLEGLIEKYKSLL DF >gi|325481747|gb|AEXN01000002.1| GENE 109 105024 - 106235 1324 403 aa, chain - ## HITS:1 COG:no KEGG:FMG_1108 NR:ns ## KEGG: FMG_1108 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 48 395 25 369 571 322 52.0 2e-86 MMISFNSFTSKADIINDQESDSNELEFSESNEEDRNSSDLEISSDENSDKSTDKLEINDE NKIEDKSGEVSKLEISGLREDLTRAQKAVQDITPYNDDEKEMLDKYNQAVAELNDQIDKI EQNQSRPEGAVGGSQILDVQTIPTRIQLLIRIGRAIRFGTTELSNKVVAAHTKLAEYVTT GILYTLNPFASSSQIMDYINQWDALEQELLQYPDLQPQDIATIYKKASVSRQLADARRVM NENRRFKGFSIKYLEEPIRQTSAMLWRITVTCGELDEQVEKLNKAVEKITGPKVRASNIE FMEGDKGYIQIDKKTKIRPVIRPEEVKNKDYILYSSNSYIARVSGDEIIPLKTGNVNIIA VSKDSGVKKAFNLQIVGPGEVLENLPQLDPSGDNNIDLSEFYK >gi|325481747|gb|AEXN01000002.1| GENE 110 106330 - 109116 2935 928 aa, chain - ## HITS:1 COG:MA2507_1 KEGG:ns NR:ns ## COG: MA2507_1 COG4870 # Protein_GI_number: 20091338 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cysteine protease # Organism: Methanosarcina acetivorans str.C2A # 86 468 133 520 526 287 41.0 7e-77 MMKKTLSLILSMILLLPSTSFADNNKADNNEIGISGKLINDALKEKNSLDLSPINKDYKS GQKASPLQINESEDRTSERAAIPRKFDLRKLNRVSPVRRQGSNGSCWAFAAYGSMESFLK PYGNYDFSEKHLRNKHGFDWGNEDGGNRDIATAYFARGDGPINEEDDPYEDNNFNSPDGL ERSLDIEKVLYIRDKMNGTDTRDIKKAIMEYGGVYTVINSSKYYESTKYKSYYNPGSGKA DHAVTIVGWDDDFSKNAFTKTAPGNGAWICKNSWGSGYMDNGYYYVSYYDNYAGTGNAVF IPKKKDNSAFIYQYDPLGATRSVGYAGKGYMANIFTAKRDETLKEVGLYNVSAETKYKIY LVEDINKTSQLDTDKKEIASGVLNEPGYYTVDVNRINLKKGKNFALVAYMDSSDQGYRYP MPVEARIKDFSSKASSENNQSFVSSDGKSWSDLNKALPNANACIKAITTTIDKKDFNFSG GNNTNPTDDKDKKDDQKPNDNSSIKIKEISFAEGNLGYIDVSKKGQLTTLIKPENSSEKV SFKSSKPNICVVDKEKGILYPREYGNVNIVAKSESGKVSKVFNLQVVPVGLRVQGRAEVT VIGENDYIPPENEKNDTDKKDTDKNEEKPSDGNRPGEDTIKTDPKIPRDINVSLDKITLH EEDVLNLEEEVSLYPKEAEKKLTYISDNPSIADVDENGNLCALSKGSTKITIVTHNNLKT SVSVEVLEKTDPTGLNIIEMKNTDRKAGIFSIQMKAEYNSKPYNGGATLKLVSDDRVIER KIYFNNGKAESKYTGFDFGVWRNKYNAELKVKDQVSTCEFDFSKIEEDVQTDKERSVSKV ELTNFETSERKAGVFNINMQAEDESGPYTGPAKLIISSGDRTLEKDIEFKEGNSKETFTG FDFGVWRNDYNCQIKFGDDSFETEFSFE >gi|325481747|gb|AEXN01000002.1| GENE 111 109403 - 112162 2544 919 aa, chain + ## HITS:1 COG:MA1513_1 KEGG:ns NR:ns ## COG: MA1513_1 COG4870 # Protein_GI_number: 20090372 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Cysteine protease # Organism: Methanosarcina acetivorans str.C2A # 56 491 69 507 511 291 38.0 5e-78 MKKKISVLTLILFILTSPISNAQTDLKENVSFDKDVNINSKEANKEEKQIEFQEINPDFY NFEKSVNKQKSGKNSEKSYNGFRPEPYKIFYGNEKENKKNRQMAQNFPSSYDLRDYRKLT PIRNQGPNGSCWAFASYGSLESTLMPKYHDFSEKHMRNTHGYDWDPTQGGNRAVSTAYLA RWSGPINESDDPYAPFEFYSNPNLIRSMDLKAVWYLPDKTSFDSNMNLIKETLMKYGAVQ TGMNANDYFVNKRTWAHYSNVPRYDNHAVTIVGWDDNYSRYNFNQTPPTDGAWLIKNSWG EYLGINGYYWISYHDYNVASSNAIYFAKNKGRNTNIYQYDWLGMTSSFGYGGSGFMANVF GPANYDQYVNSVGFFTPAGETNYDIYLVDNFINTGSFSNMKKLKSGKVNFAGYHTIDFSS QKINANNKFSLVVELSSPYTSTPLGVEEPIWGYSSMAKAGYGQSYVSSNGYNWSDLNSIR FGTNACVKAFTSRKASSILINDNSPIDDKKDEEKYSYKIKENKKDLLQGQTLELKFDGPE NVKWKSSDEKIAYVDKNGKVYARKQGNVEIRAEVDSKSDTANINISENKKARFEINTDKF DNKLNDLVVFKIRAFDYNNRLLTGQNLGIKVKTPNGKEFKLNKQTDSNGYVPVYIYTDQI GEEGIYTIDLMGYISSYMVKNGSYFKVSENPSYDKENEDPEKPNPKPEPEPLPVPEPEPI PEPDPEPKPKPEPSPKPEPKPEPDPDKEDEKDKIFNIKVGDRIKVLRNNNSNSIFKVEDE NLAKVIGQNIIALKPGKTKILTINDEEEKASILNIEEKKENENRIIKLDEEISDKENEVI FSYNLINYRGRICKNNTVSCNIQNLDNKTIYNKVLKTDNDGLIKLPVDLNSLEDNLYQIE LVSYIDGYLVKYYDILEIE >gi|325481747|gb|AEXN01000002.1| GENE 112 112239 - 112331 83 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDSRNVLEMFEKLKKSGNIRDSYNYIEPNM >gi|325481747|gb|AEXN01000002.1| GENE 113 112331 - 113236 1097 301 aa, chain - ## HITS:1 COG:BH2703 KEGG:ns NR:ns ## COG: BH2703 COG0673 # Protein_GI_number: 15615266 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Bacillus halodurans # 2 296 1 295 329 214 35.0 2e-55 MINFATIGSNFIVENILKTVVKMDGYNYYGVYSRSIEKADHLKEKFGAGKSFDNLCKMLE DPKIDLVYIASPNSLHYKQAKMCLLANKNVVCEKPFFTNTKELDDLIKISDDKKLFLFEA ISIKYLPSLEILKNLLGQIGKISTCMINYSQYSSRFDKYKEGIVENIFKSEFSAGALADL GIYNLHLIYELFGMGEEFSYFGNINDYGVDISGSGIISYGDFSVSFTNAKDSKSENYIIV QGEEGYIKVYGNIQEAEKIELYKDGKSEFIDIKKERDLYFYEFEYFKEIFENKDFESSKK K >gi|325481747|gb|AEXN01000002.1| GENE 114 113229 - 113855 329 208 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325845912|ref|ZP_08169110.1| ## NR: gi|325845912|ref|ZP_08169110.1| hypothetical protein HMPREF9246_1635 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1635 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 208 1 208 208 251 100.0 3e-65 MFFKDTFKRFFDEKLIFIILTISYMAYLLVKLLIEVEGLIFLFYFSISLLTSLIFREACL TDEIYFEDKKKLNKNNILSYILSKNLFAIFLVSMLVILVFLLSFLLKYKIVNIKDFFDIL ILILATLASENIILLFYNKPIFTEHPKSMIGDKYIGKGYIKSFLPSFFIDLLITLVFERL SLIYLFIFCYFISIIIFYIRVKNRGLYD >gi|325481747|gb|AEXN01000002.1| GENE 115 113994 - 114359 139 121 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325845853|ref|ZP_08169051.1| ## NR: gi|325845853|ref|ZP_08169051.1| hypothetical protein HMPREF9246_1636 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1636 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 121 28 148 148 167 100.0 2e-40 MFLPIYYFICLGLFLILFLIIYKYSFTFLDFSIIFLMSFGFFLSLKSQGVTKNSIIIFEK IPNLPKFIKFKDIKNIKTIENSKYPKCRIWAYGNFYDIYFKNYESLDTFKKIIFENDNKS C >gi|325481747|gb|AEXN01000002.1| GENE 116 114931 - 115635 1001 234 aa, chain + ## HITS:1 COG:no KEGG:Apre_0499 NR:ns ## KEGG: Apre_0499 # Name: not_defined # Def: YodA domain-containing protein # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 1 234 1 234 234 236 58.0 5e-61 MKNKKSLSLVALLSLGLVMTACGKDQNNNEPSSTNVSQEMKKDDASNKSNASSDDKSNAT SDDNKEKSSEVSLADWEGEWNDMGGYLEKDEVQNAFKTLAEKEKVDEKEAKENYLKKRKC DFGGLEIKDNKIKFLKDFPDKKGEVISESEYKYVEKQEVEHGGHKLEWDIFEAVNDDAPY KYILMMPIHGEESLTHFHMRYGDDKDKLLKEEGWFPTFVKPNTTDAQIIDEITE >gi|325481747|gb|AEXN01000002.1| GENE 117 115681 - 117021 1334 446 aa, chain + ## HITS:1 COG:TP0034 KEGG:ns NR:ns ## COG: TP0034 COG0803 # Protein_GI_number: 15639028 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Treponema pallidum # 262 437 143 311 316 121 34.0 3e-27 MKKRYISFFVFLLFLFSSCANKNEHSSDKPLVYTSFYPVNEMTKMIGDDTIDVESFMPLD KQPHLWEPSPKDMKKLAKCDLLVVNGANMEPWLDKVKENLPNLDILKLSDSVDLITYKGA AAIGDFQYMSKVNLKKGKNKFDFGHTHEDMMRVAFIKDDGSRGENLVKKCKDIMSQKGEL IHQKETFDLEEGKVYGLEMGHESGEVFFNVPKDGDYIFISDRISEDLLPYNLVGSDGKFL KDEKKEEPLMEGSSSGFDKITYDPHSWLSITNAKKYLNAINEKLTEKYPKNERVYRKNKL KYVDKLTDIDAKYKEKFSKIDKNNRNFLVIHYAYAYIARDFDLFQYPLQGLTSLENPSLK TIKKAIDFSESKNISTVFYEYGQNPKQAKALAEEIGGKVSPLASMEYVNKEQEKNKLNYI DLMEMNLENLYKSMSKEENNESSINK >gi|325481747|gb|AEXN01000002.1| GENE 118 116999 - 117670 298 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 3 206 11 209 318 119 37 8e-26 MKAVSINNLNFSYSQTPVLKDCNLNVDVGEFTVILGGNGSGKSTLIKLMLGELKKNSGEI KILGKNIEDYVSFKDIGYVPQINIVNKIAFPITCLELVSLNLYEEFGFIKIPKKNHYQKA KDILKKMGMESYINTPVNELSGGLAQRAMISKAMINDPKILILDEPTAGVDKYSKDHFFE TIDFLSKKFNVTIIMVTHELKEMESLSIEFTKYEMIEGSLKKC >gi|325481747|gb|AEXN01000002.1| GENE 119 117664 - 118464 1037 266 aa, chain + ## HITS:1 COG:lin1484 KEGG:ns NR:ns ## COG: lin1484 COG1108 # Protein_GI_number: 16800552 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Listeria innocua # 1 263 5 276 292 139 34.0 6e-33 MLEFAFMRKALILGFLLSIMIPIIGIVMVNRKTSMIGDALSHTALAGVGMGLILGFDPLL GSSIVCVVAAFLIELIRKKLPQYGDMATAVIMSTGLGIAAILSDFAPGGNSFESYLFGSI SSVTDRDIVNTSIAFILVLILSISRYSSLLAIAIDPNTARLAGVKVKSLDASFTLLAAIT IALSVKIIGALMVTSLIVLPVATALIIAKSYKQTFFITITLGVVYMMLGIILSYQFDIKP GGAIVVNAIIGMLFFVLYKKLRKNKV >gi|325481747|gb|AEXN01000002.1| GENE 120 118665 - 119639 1406 324 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325845918|ref|ZP_08169116.1| ## NR: gi|325845918|ref|ZP_08169116.1| hypothetical protein HMPREF9246_1641 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1641 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 310 6 315 329 413 100.0 1e-113 MKKTLTKILFAVLGLCILGAIAFFAFGQKGGKSILKKSDGKIDTSKADIKVEISGFDGYG KAKLSKEEVENLDVESFNDDYSTENILDSIDIDLKANKLENLSNGDEIEITINFKNTSDL DIDITNKKVVKKIKVKGLEKIINSLDDLDDDTLDRMNKDAKEKLGKDFYDQNKGSDDEKY YTGDKMNYEFNQLATLEKPLTEKEIIEKSKFDNQKSFAIAMVYEIKFQEVKDYDWDDDTD KKVITKKEDKAKYAVFTFENIQKNNGGIIYSTNRPYLVDSEEKALNQIKYDGYELIDNDK NKKTDLSNQSNNEKEENNKKDDNK >gi|325481747|gb|AEXN01000002.1| GENE 121 119649 - 120371 779 240 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325845909|ref|ZP_08169107.1| ## NR: gi|325845909|ref|ZP_08169107.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 240 1 240 240 419 100.0 1e-115 MVKKFLILALFLPILVSCKDNKRIIESNSSEILSKENKKSDNNISKEDSDKEESNLPEKN SQEKKEEIDPIFDILNGKRFVYKHVHDRFYQSLQFGKNGFFNSKYTFTQTDTSGEFTDYQ SICQMQGSFIVENKMDDKTYTLRLINPSITSETGKSEIVSDGSYKHNIEYKDLKGGLAID DSQDIFQDLYTLYLPGKNVDEIKDEVKQNLALIYINFEGENTYYLLVNNKTNAVFIEGIE >gi|325481747|gb|AEXN01000002.1| GENE 122 120447 - 122189 2061 580 aa, chain - ## HITS:1 COG:pli0037 KEGG:ns NR:ns ## COG: pli0037 COG0003 # Protein_GI_number: 18450319 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Listeria innocua # 1 580 1 580 580 683 59.0 0 MEKFSPDKIKLGKYIFFTGKGGVGKTSTACATAVNLCDKGSKVLLVSTDPASNLQDIFVE KLNNKITKIEEVEGLFVANLDPIKAADEYKKSVVSPYIGKLPDSVINKMEEELSGSCTVE IAAFNEFAKYITDKETKEQYDYIVFDTAPTGHTLRMLQLPQAWDNFIEENTQGTSCLGQL SGLESQKGMYKKAVETLSDNDKTSLILVTRPEDGPLKEAGRASKELKDIGIKNQILLLNG LLTIHDDKISKAYYEKQKESLEKMPENLKKLQKYLIALRGYNITGISNLRALFDQDFYTE NNLEDDIKIDKKLKDIIDDLYKNDKKVIFTMGKGGVGKTTVAAAIALGLSKKGKKVHLTT TDPADHLKYTIKENENLSISHIDEKLELEKYRKEVLQKAKETMSDDDLSYIEEDLRSPCT QEIAVFRAFAEVVEKSEEEIVVIDTAPTGHTLLLLESTQSYNKEIMRSNGDIPEATKKLL PRLKNEKETEVIIVTLAEPTPVYEALRLEEDLKRAGIFNKWWLINSSLYASNTSNKILKS KANEEVKWINYLDEHTNKNLALIAWNPKKLSGKILEDIID >gi|325481747|gb|AEXN01000002.1| GENE 123 122208 - 122576 472 122 aa, chain - ## HITS:1 COG:no KEGG:CLM_0906 NR:ns ## KEGG: CLM_0906 # Name: arsD # Def: arsenical resistence operon repressor ArsD # Organism: C.botulinum_A2 # Pathway: not_defined # 1 121 1 123 123 124 52.0 9e-28 MKKIRIYEPAMCCSTGVCGVSVDPELLRMSSLVEKLEKKGVDIKRFNLNSAPQEFVENKK VNEILNQKGEDVLPLTMVDDEIIKSEGYPSNEEFEKILSIKLDEKNEEESSCGCSSDSGC CC >gi|325481747|gb|AEXN01000002.1| GENE 124 122661 - 122975 460 104 aa, chain - ## HITS:1 COG:pli0036 KEGG:ns NR:ns ## COG: pli0036 COG0640 # Protein_GI_number: 18450318 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 9 102 3 96 121 91 47.0 4e-19 MDKKMGDKYVNISKKLKVLSDPKRLEIVDMLSCEELCACEILEKFDISQPTLSSDMKKLE DANIIKSRKEGKNVFYIVNNESLKELEKLLGQIFESSPDCICKE >gi|325481747|gb|AEXN01000002.1| GENE 125 123305 - 125716 1926 803 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 786 9 806 815 746 46 0.0 MENNKLNRLTGQARRESYSLSHDYIGVEHLLLALMKTGSLATKALEEAGANYELLRSIVI NNIGKGSAVRPAKEYSNKVRQILDRARLFAQKRRKVSAGEEDVLLAILNDDDSFTNLMFM LSGLDKKIIRDNLIRLQNDEKSGKSSKSLGENLKKFSKNLNDLAESGKIDPVIGRNGEIE RVIQILLRRTKNNPILIGDPGVGKTAIIEGLAQRIVEEKVPLIIKDKTIVSLDLASMIAG TKYRGDFEERLKKLFEELENREDVILFIDEFHMVLGAGASEGSMDAANILKPILAKGDIQ IIGATTIDEYRKHVEKDQALTRRMQPVHVEEPNKNDTIKIIEGLKDKYEDHHKVEITDEA IKAAVDLSQRYIQDRFLPDKAIDVIDEACSKERIKNYRENKEQTSKKEILDKLIEEKTQA INEQNFEKAASLRDQIKEAREEIEKENKENKIDLKIGFDQIAKIVSDWSKVPITKLTEDE KQKYMDLDIDLKKEVIGQDKAIDAISHAIKRSRVGLKDPKKPIGSFIFVGPTGVGKTYLA KSLAENLFGDMDNLIRMDMSEYMEKFAVSRLVGSPPGYVGYEEGGQLTEAVRKHPYSVIL FDEIEKAHPDIFNLLLQILDDGRLTDGQGRTVDFKNTIIIMTSNVGVSSLNQNPKIGFGT GDVDKEIDDSNKEIINKAIKNAFAPEFLNRLDDIIMFNSLAKDDIKEITKIILDQTKKRL EDLGIEINYNKRVVDLLAEGGFSKEYGARPLERHITNKIDNQLAEEILEGKLSKDMVINL TVKEGKINFANKKEKIKEEIPVS >gi|325481747|gb|AEXN01000002.1| GENE 126 125716 - 126684 1050 322 aa, chain - ## HITS:1 COG:lin0263 KEGG:ns NR:ns ## COG: lin0263 COG3869 # Protein_GI_number: 16799340 # Func_class: E Amino acid transport and metabolism # Function: Arginine kinase # Organism: Listeria innocua # 7 296 20 305 340 76 23.0 6e-14 MIDYYKDIILENNLSLKRNIENYNFPNTMNEKDSLEIIESFREIYGDDLILIDELDEITL NKLINAGIISPDSMNKEAVIGLVFSDDHILVINDGDHVSINITNFGEEIKLAYDRAMEIE GDLDKKLDFSFSPQYGYLTSLGRNSGNGIEIRLKMFLFGLLDNSQAYLSLKSSLAHEGIY LTRFIPEYFKSYDDDIYILKNFGNYRKDMGEYLENFENILDTIVRNERRFRRDFQSLNGI NDEDIKDTIKILEDNLYSKNLKSLTSMVNCLYDLKKYNVLGFSTKLSNQEIDYLIFNITK NKYKGNRDEERYEFFNSYMEAR >gi|325481747|gb|AEXN01000002.1| GENE 127 126681 - 127256 618 191 aa, chain - ## HITS:1 COG:CAC3191 KEGG:ns NR:ns ## COG: CAC3191 COG3880 # Protein_GI_number: 15896439 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 1 188 1 170 175 58 27.0 5e-09 MKCDRCDNEASVTVKALINGTEHNFHLCNDCVQKLSKGEVTGFEDYKEVDIDNFDWRSLV EKFVPSLDQIIDSYYDYKISKNNFSYDYFSSLKDEHCPECGNSVANIRAGIFGCPHCYEL DKKISREVLKAVNNLKKYDGKFPRKHRDFREVAIKIKNLQEELQKSVEIEDFEKAQDLKE KIDELNMKVRN >gi|325481747|gb|AEXN01000002.1| GENE 128 127261 - 127725 212 154 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 1 147 1 147 158 86 29 8e-16 MAGLTSDIEKFLKALLENAQEGFVEIGRNDLATRFECSPSQINYVLSTRFTPYNGYLIES KRGGNGFIRIITIVEDEDDYIKYIIKNLDKELTEERAKSFFTELFNKGYMDEKELGIAVY ATLDKSLMNVEKNKRNLVRHDIVKNILLSFLIRS >gi|325481747|gb|AEXN01000002.1| GENE 129 128128 - 128814 857 228 aa, chain - ## HITS:1 COG:CAC1724 KEGG:ns NR:ns ## COG: CAC1724 COG2738 # Protein_GI_number: 15895001 # Func_class: R General function prediction only # Function: Predicted Zn-dependent protease # Organism: Clostridium acetobutylicum # 2 225 3 226 227 166 43.0 4e-41 MFYYDRTYILVLIGLIISSLAQANIQKKFDKYKKIKTQKSITGFDAARYILSTNSYNDIS IKKVRGSLSDYFNPVSKEVALSETSMTDTSIASLAVAAHECGHVIQYKEGYIPLKIKSYI VPAVNLGSKLSFPMILLGIFLSMGKLITIGIFLFSFVLIFQIITLPVEFDASRRALKVLK ESGMLVGVENDYAKDMLKSAALTYVAATISTALQFLRLWILFGNRRDD >gi|325481747|gb|AEXN01000002.1| GENE 130 129418 - 130083 974 221 aa, chain - ## HITS:1 COG:lin1022 KEGG:ns NR:ns ## COG: lin1022 COG0569 # Protein_GI_number: 16800091 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Listeria innocua # 1 217 1 218 219 160 37.0 2e-39 MDKNVIVLGLGRFGERVATKLFEDGLEVMAVDKDYDLVQNIADKVTSAVQCDIANDNALE ELGIGNFDVAVIATGESLEASMAATLYAKDHNVGKIIAKATSRNHARILKKIGADQIIFP EIDMGEKLARSIAGSNLLQFFHFSDDYSMLELKAFDDIVGKTLAEIDFRKKYRMMVIAYK RDGELVINPDANWKIQKNDTLVLLGDSENSEKLQKEVDKYK >gi|325481747|gb|AEXN01000002.1| GENE 131 130093 - 131460 1663 455 aa, chain - ## HITS:1 COG:BH0598 KEGG:ns NR:ns ## COG: BH0598 COG0168 # Protein_GI_number: 15613161 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus halodurans # 22 455 18 448 448 284 39.0 2e-76 MTNIRKNKENFLEKLSDKITSNPPLYLTLGFAILILIGGFILSLPIFTRSGEPTNLIDSI FVAASASCVTGLTTVNTAEHWNSYGHLLILFLIQIGGLGVMTLATLFPLLLRKKIGLKSR QILKEQLNIDTLQGIMKLFRYVLVFTFLVEFLGAFILSLRFVPIFGMAKGWWYSIFHSIS AFCNAGFDLLGDSIYPYRNDNLINVTLMSLIVIGGLGFMVTAEFFRKRSFKKLSVHAKLV FIISAFLIVIGTLAFYLIERQVGGVLYKEGFKNSIMQAAFQSISARTAGFYSVKLNQMHD TSVLLLIVLMVIGGSPGSTAGGLKTTTFGVLVLSTISIFKEEDEVTIFKKHIDSKTIRKA LAIIMVYLGLIFFVIFILSMSENFKVLDISYEVASAFGTVGASRGITGDFSNLGKILITL SMYLGRIGPMTMAYSIGLKSKTKYIRYPEANISIG >gi|325481747|gb|AEXN01000002.1| GENE 132 131616 - 132119 552 167 aa, chain + ## HITS:1 COG:SP1384 KEGG:ns NR:ns ## COG: SP1384 COG4894 # Protein_GI_number: 15901238 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 152 5 155 165 74 32.0 1e-13 MKKYYFKEKFFKLTDKYPILDENGNEVYFFDQDFKFVGYKAKLKDIDGKVLFDISKKILS FLQTYYVDFYDGSHMEINQKLSFLKRKVEINYQGERFSLKGSIMDHDFEVYYKNNLIAEM NKKFFALTDQYELTVYDENYSLLLIALCLCINEMKDRDDAAAAASSN >gi|325481747|gb|AEXN01000002.1| GENE 133 132289 - 134964 3343 891 aa, chain + ## HITS:1 COG:MA4082 KEGG:ns NR:ns ## COG: MA4082 COG0474 # Protein_GI_number: 20092875 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Methanosarcina acetivorans str.C2A # 18 890 17 907 909 676 43.0 0 MDYLGQKNDLVKKLDSDSSRGLSKDLAAKRLEENGPNKIESKKKKSLGKKIAEQIIDPMV ILLIVASIVSAFTGDTVECFIIIAIVIINAIMSIIQEGRAEDSVEALQKMSSPEASVIRD GKKIKVKAEDLVVGDIVVIETGDIVPADMRLLESSNLQIDESSLTGESVAAEKNSEVIYD SEVGIGDRENFVFSSTIVTYGHGKGIVTQTGSDSEMGKIASSLHQVEDKDTPLQRQLNKL SKLLAMLVVVVCIIVFVVGYFRTGDSLLENLMVAVSLAVAAIPEGLTAVVTIVLSIGMNR MAERKAIVKSLVSVETLGATTAICSDKTGTLTQNEMTITKVWTNEKEYEVEGSGYEPKGQ IKLDDEKIEDEENIKLLMKISTLCNDADLTREGDQYKIIGDPTEGAMLTFSEKWGIVQED MEDKHPRLEEIPFDSDRKMMTTFHNIEENYKSMTKGAPDIIISNSSKILLNGEIVDFTED LKKKAMDENKNLAKQALRVMAYAFREFDSIKNEELTSENIEREMVFVGLTGMIDPPRPEA KKAVAECHSSGIDVLMITGDYLETAFAIARDLGIADSKDQAIEGKELNNMSDDEIREIAK EKRVFARVSPQNKVQLVNALQENGEIVAMTGDGVNDAPAIKNADIGISMGITGTDVAKDT ANMILVDDNFATIVNAVEEGRIIFSNIRKFVSFLLSCNIAEVLIVFLSILFGLPSPLTPI QLLWLNLVTDAFPALALGVEPGEKDIMERKPRDPKESIISGDLKNSLIVQSLAITFSVLA SYLIGLKWIFPGNIEGAHTMVFATLITSELLRAFSVRSTKYTLKELGIGSNKQLIKANLL SFALLLIVMYVGPLRYLFELEFITWQWIIILALAFIPLILGEVHKISARKK >gi|325481747|gb|AEXN01000002.1| GENE 134 135182 - 135469 355 95 aa, chain + ## HITS:1 COG:no KEGG:Apre_1529 NR:ns ## KEGG: Apre_1529 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 95 1 94 98 94 56.0 1e-18 MRKKEKQKYFMEKLHQIYNDKNLNLTETCRREILNQYKELSNNKTNINYASYKLYPYLRD ALYDNEDSELLGDFMKIVLKYRWRAYFGMILPTSF >gi|325481747|gb|AEXN01000002.1| GENE 135 135515 - 136075 643 186 aa, chain - ## HITS:1 COG:BH0870 KEGG:ns NR:ns ## COG: BH0870 COG2059 # Protein_GI_number: 15613433 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Bacillus halodurans # 8 184 10 174 180 83 30.0 2e-16 MLSLMWEFFKTGLFAIGGGMATFPFLQKMAENYDWFTSEELLDMIAVSESTPGAIGINAA SFAGYKAYGIVGAILATFSLISPAIIIVLIIAKSMDKFKRSLRVKNAFEYIRPSTAGLIL GAMLNVMVISLFNVKLYQKTGNFLDLFQIIQLILFMGFLFLLRKYKKIHPLLIIGMGALF GIIFKL >gi|325481747|gb|AEXN01000002.1| GENE 136 136068 - 136601 580 177 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 4 172 6 174 186 114 40.0 1e-25 MKILLDLYITFFKIGAFTFGGGYAMLPLLQRELVDKRKWITEEEMLDYYAIGQTTPGIIA VNTSTFCGRKRKGNLGGIIASLGFITPSIIIITIIANFLKEFSHLLIIQHAFAGIRIAVS ALVLNTVINMVKKTANTKIKILIFVLTFIAIGIFSISPIIIVIACGIFGILFGGKYA >gi|325481747|gb|AEXN01000002.1| GENE 137 136716 - 137255 669 179 aa, chain + ## HITS:1 COG:no KEGG:SSA_1110 NR:ns ## KEGG: SSA_1110 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 13 177 15 177 184 76 27.0 6e-13 MNLTLSDSYLKYLNEINDLYIEAFPKAERKPMDQIIKVCQNGYGRIIPILMDDEFVGMFI TLDSDGDNTLLIDYFAIKSDYRGLSLGSKAIELLNEMENKTIIIEIEPCVNEASNLLQRQ KRKKFYENLGFRQTDINISWFGVDLELMSLNKTINFNHYMDLLTSIFPRAYIEENIKLT >gi|325481747|gb|AEXN01000002.1| GENE 138 137272 - 137925 807 217 aa, chain + ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 4 184 9 189 215 80 30.0 2e-15 MKLLFDCDGTILDSMHIWLEPIGKLLDDYNFKLTTEQKGQIEALTFIDTVRWLNKNVCPE RSKEDIINYFSDTITDAYKNSLMPKVGAEKTLRKLKAEGYDMCICSSTDRIHLENALKRL DLFDLFDFIQTPDTIGYKKNQIEYWQDALDKYQIKAEEAVLFDDALYAIKTAKKLGIKIV GIKDFPHNKNEWEEIKKESDIILDNIKDLDMEKIKNL >gi|325481747|gb|AEXN01000002.1| GENE 139 138226 - 139587 1395 453 aa, chain - ## HITS:1 COG:VNG0727C KEGG:ns NR:ns ## COG: VNG0727C COG0534 # Protein_GI_number: 15789902 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Halobacterium sp. NRC-1 # 5 451 15 477 494 145 26.0 2e-34 MEKRKDIDLTKENIGKSLILLSIPLTLTAFVQIAYTLVDMVWIGRIGSNAVAAVGVSYFL AWIAEALSLIAKIGGGVYASQAYGRKDKKLTSLILQNGYLQGFITSIIYIILILTLKTYI IDFYKLGDEVSKFANQYLSITALGYVFVFLNPIFSQAFYSIGESVTPFKINTIGLVLNII LDPIFIFGLGPIPAMGIRGAAFATVTGQATVFIIFLFVMKRKDGVIKNSLEDFSLSTKWQ KRIFKLGLPVSFISGIHALITIILNKLMAGFGPKPVAVYSIGSQLESISWKTTEGCQAVI QSLIAQNYGAGLVDRVRKGVKESLKLVGAIGLIASIILFGFRNSLFKVFVPGDLETINLG AKYLAILSASQLMMSLEIGSTGIFQGLSDTRTPSIISVIFNGARIPISLLLIPYFGVLGI WLSMTITSIIKGLLSLYLLRKKIKKNLKFVDFR >gi|325481747|gb|AEXN01000002.1| GENE 140 140096 - 141475 1894 459 aa, chain - ## HITS:1 COG:FN0225 KEGG:ns NR:ns ## COG: FN0225 COG2610 # Protein_GI_number: 19703570 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Fusobacterium nucleatum # 3 447 2 440 452 438 62.0 1e-122 MSDNRILIALIVGLVLLIGLIVKTKIHTFLALIISALFIGVAGGMPYEEVIKSVTDGFGG TLGSIGIIIGFGVMMGQLFEISNAAKRMALTFIKIFGKGREDLAMAITGFLVSIPIYCDS GFIILFPVAKALSKNTRKSVITLGLALASGLVITHTLVPPTPGPVGAAGIFGANVGAVIL WGIVIAIPMVLATLLYARYYGKKVYQLPDENGDWIRPEIQEESKIVDYKLDENEKMPSAT IAFLPIIVPIILILINTIIGALSKVKGFEIKGILSTFVFLGTPIVAVGIGLVIAIITLTK NMSRDKVIKELEIGIQSAGIIILVTGGGGALGKVLTESGVGSDIATSISKMKINPLLLPF IISTLIRFIQGSGTVAMLTSASISAPIVLELGVDPVFATLSACVGSIFFSYFNDSFFWVV NRSLGLTKAKEQIKGYSIISTIAWAVGFVSIVILNLLFG >gi|325481747|gb|AEXN01000002.1| GENE 141 141486 - 142478 410 330 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163786851|ref|ZP_02181299.1| 50S ribosomal protein L32 [Flavobacteriales bacterium ALC-1] # 6 321 9 323 346 162 30 8e-39 MKRSRIAVTLGDPAGIGPEIVAKTFNVKELYDQADIVLVGDKNVLEKALKVTGLDLKINI IEHVNEGKYEFGTIDLIDLKNMPEDYEFGEVSAACGKAAYEYIFKAGELAMNGEVESVAT SPINKESLRAADIPFIGHTEMFEKISGVKDPLTMFEVEGLRVFFLSRHLSLKDAIDQVKY DKVYEYIERCTEAMKRLGVEGTLAVAGLNPHSGEHGLFGYEEVEEISPAIEDAKKKGFDV TGPVGADSVFAQGLQGKYGAVLSLYHDQGHIATKTYNFMKTISLTNSMPFLRTSVDHGTA FDVAGKNIASEVSMVEAVKLAAKYGPQFRR >gi|325481747|gb|AEXN01000002.1| GENE 142 142481 - 143761 1494 426 aa, chain - ## HITS:1 COG:FN0227 KEGG:ns NR:ns ## COG: FN0227 COG3395 # Protein_GI_number: 19703572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 1 421 1 421 425 296 41.0 7e-80 MKEVMIIADDLTGANANCALMKGIGLTTASITGNDISDLRGEIDVFAFTTDSRAMSSDQA YKRVFEKVNKFKKDEVILYSKRIDSTLRGNLGSELKAYQDALGDKRLAICVPSFPDSKRI VVNDFMYVDGIPLMNTDAGKDSKISAVSNLVSENFKKDYEGKIKHISINEIEKGIENIKK LIIENKDYDLLIFDAITNEQIRKIAKASIESKVNFISVDPGPFTKEVTKILYKQSHISTK ALAVIGSVTNVTINQMKQLYKNFNSFKLEVDPIKLIDIDLALEEIERATNLAEKELKERK LVVITTTPDDIEKRLDLKSISEEKKMSIDDLSLMISRGLAKIAKKIIVKDKAISGAFTSG GDVTIAVTEELGSQGIEIREEIEPLVAYGRLIGGCVDGLKIVSKGGMVGTDQIMVKCIDR LLSKGE >gi|325481747|gb|AEXN01000002.1| GENE 143 143780 - 144088 291 102 aa, chain - ## HITS:1 COG:BS_glcR KEGG:ns NR:ns ## COG: BS_glcR COG1349 # Protein_GI_number: 16080683 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 1 96 135 230 258 63 34.0 1e-10 VKTYLLGGYVDIKTRTLSSIDGLENLSRLHADICFMGTDAYDEKFVYSTSEKKGRIKRKM IENSNLSIMMTDTSKFGKTGFYSFNKCDEFDYFITEDFKSNI Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:19:25 2011 Seq name: gi|325481738|gb|AEXN01000003.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00022, whole genome shotgun sequence Length of sequence - 4722 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 3, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 159 203 ## COG0550 Topoisomerase IA - Prom 183 - 242 3.8 - Term 171 - 206 5.1 2 2 Op 1 . - CDS 252 - 1235 1016 ## SPAP_0886 hypothetical protein 3 2 Op 2 . - CDS 1228 - 1839 703 ## Apre_1820 hypothetical protein 4 2 Op 3 . - CDS 1913 - 2770 854 ## FMG_0957 putative bacteriocin 5 2 Op 4 . - CDS 2785 - 3327 613 ## FMG_0958 putative chimeric erythrocyte-binding protein 6 3 Op 1 . - CDS 3432 - 4367 1119 ## SPAP_0883 hypothetical protein 7 3 Op 2 . - CDS 4354 - 4593 217 ## SPAP_0882 hypothetical protein 8 3 Op 3 . - CDS 4608 - 4721 106 ## SPAP_0881 cell wall-associated hydrolase Predicted protein(s) >gi|325481738|gb|AEXN01000003.1| GENE 1 3 - 159 203 52 aa, chain - ## HITS:1 COG:SA2051_1 KEGG:ns NR:ns ## COG: SA2051_1 COG0550 # Protein_GI_number: 15927834 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Staphylococcus aureus N315 # 3 51 4 52 596 60 48.0 7e-10 MKLVIAEKPSVAVTIAKVIGARTRKNGYYEGNGYIVSWCVGHLIQMASPDKI >gi|325481738|gb|AEXN01000003.1| GENE 2 252 - 1235 1016 327 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0886 NR:ns ## KEGG: SPAP_0886 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 327 1 327 327 564 95.0 1e-159 MNKFYVENKEDLRILIVNTARKKNVSEAVIEKDYWVTFILDYLFNENKWKEYLTFKGGTS LSKCFGLIERFSEDIDLILDWRVLGYEEKEPWIERSNTKQDKFNKEVNKKTEEFLRDEFV KILEQDLKDFDFEFSIDTIDPQTILCKYPKIFESNYLTQNIRLEIGSLAAWTPAIEVEIF PKISEAYPNVFKEKTNIRTVSAERTFWEKATILHHEANRPESSPMPHRYARHFYDLYKIA NSDFKDRALEDKELLKKVTEFKMKFYPRKWARYEEALDGRLKLVPRKYRFSEIEKDYKAM SEMIYGEYPNFEEIIKVLQELEKEINK >gi|325481738|gb|AEXN01000003.1| GENE 3 1228 - 1839 703 203 aa, chain - ## HITS:1 COG:no KEGG:Apre_1820 NR:ns ## KEGG: Apre_1820 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 203 1 203 203 335 87.0 1e-90 MSSYTEKISDKINDFDSHKVFFANDFLDIASYETARKTLNRMVNERKIKRVVDGFYYNPR YSELIGEYEAVSIHELALAIARKYNWNIAPYNSTALNLLGLSTQVPTHYKYISSGRYKEY KIGDTILEFKKVNPGEIANMSLKTATVIQAIKSLGKESINDQVIQKIRENLTEKEKLDLM NESKSVPSWIYEVIREICEDKDE >gi|325481738|gb|AEXN01000003.1| GENE 4 1913 - 2770 854 285 aa, chain - ## HITS:1 COG:no KEGG:FMG_0957 NR:ns ## KEGG: FMG_0957 # Name: not_defined # Def: putative bacteriocin # Organism: F.magna # Pathway: not_defined # 1 262 1 262 288 410 98.0 1e-113 MNKSIKRGVAIALLLFTFTVPATTFAMTNEGQIESQNESIYEPQKEEFEKMLKDDVFTPS KEEIPYQDVPRIPGNTSEANKSSNNPPKKTPLVKGGNTKAVNNLATQENKARGSVIENVD RNGKDITPSGDTEKDKENPVDVRQFLTFQTKSGKTMHLIVDHSSNQDNVRLLTEVGEQDL LNMIESEDKNTIKVEEPKKEEVKKEEPKTVPVKEEKKSGIGSFLIVALVIGGVIGAGYYF KVVKAKEDKMLEDFEEDDEDYISESEDDDDDETHEESLDEDDELL >gi|325481738|gb|AEXN01000003.1| GENE 5 2785 - 3327 613 180 aa, chain - ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 180 604 783 783 296 97.0 2e-79 MKADDKNILNQIDLNKMKKQEEQQGKKQVKNEKEFAVFQVDKNFYNIINKDGKTTVYMDV KTYVDQGRTMIPVRYIAYTLGFNVEYDNSTREAIFSNKENNILAKKTLRLNIDTGVMKDS DGKVYNSDVKPVIINGRIHASISNIAKAFGASHGDIKDGKNQTIEWDNTRKAVYVFKNVK >gi|325481738|gb|AEXN01000003.1| GENE 6 3432 - 4367 1119 311 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0883 NR:ns ## KEGG: SPAP_0883 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 310 1 310 527 273 95.0 8e-72 MKKFNTNRLRAFFMALLLVLTSTSTTNVLAKADDTDGSKKVIESSISKISDLENQIKDLN DKKQEDQSKIDELKGKLESCKDNGEKLKQEKAKLEEEIRDKDNKIAQLNKEIEELKNSNN DELIAEITQLKDELKRLQDENVKLKEDYSSTKWELEAEKENTDKNENKIKEMQENLESLE EELAKKTKEIEDKDNKIKGLEKALDEKDNKIKELESKKKETENSKSECFKKIEELQKAID SLKESSENTKKELEEKIKELEEKQKASEEEIKKLKEELDKKIEEAKKLIEEANKKAKEEL EKQAKDEKEKI >gi|325481738|gb|AEXN01000003.1| GENE 7 4354 - 4593 217 79 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0882 NR:ns ## KEGG: SPAP_0882 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 79 1 79 79 62 100.0 5e-09 MNRKLISIRNKKKKIEEKLKDLNAKYKEICDEEIQVENEEIIVTLRRNNISLEELMEKIN DRKREEKLKEKENIHNEEI >gi|325481738|gb|AEXN01000003.1| GENE 8 4608 - 4721 106 37 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0881 NR:ns ## KEGG: SPAP_0881 # Name: not_defined # Def: cell wall-associated hydrolase # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 37 823 859 859 90 100.0 2e-17 GIYAGNGMMIHAGDPIQYTSINSKYWKSHFYGFGRPR Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:19:56 2011 Seq name: gi|325481735|gb|AEXN01000004.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00008, whole genome shotgun sequence Length of sequence - 1464 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 48 - 704 501 ## COG3344 Retron-type reverse transcriptase - Prom 810 - 869 3.9 2 2 Op 1 . - CDS 888 - 1088 228 ## gi|325846050|ref|ZP_08169188.1| conserved domain protein 3 2 Op 2 . - CDS 1085 - 1237 250 ## 4 2 Op 3 . - CDS 1221 - 1415 75 ## gi|227499542|ref|ZP_03929649.1| hypothetical protein HMPREF0077_0284 Predicted protein(s) >gi|325481735|gb|AEXN01000004.1| GENE 1 48 - 704 501 218 aa, chain - ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 2 191 138 327 470 214 55.0 8e-56 MIQQAIAQILSPIYEKKFSENSYGFRPKRSAHDALKRIEEIADEGYTWVVDLDLEKYFDT VNQSKLIQILSEEIKDGDVISLIHKYLKSGIMIGGIKVNSYKGVPQGGPLSPLLANIYLN EADQELEKWGYKFVRYADDMLIFARNRKAAERYYKRVKNLLEGKLKLKVNEEKTSIRKLS QTKYLGYGFYHNNGTQLKSTQRKPKETKGKTKSGNKQK >gi|325481735|gb|AEXN01000004.1| GENE 2 888 - 1088 228 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846050|ref|ZP_08169188.1| ## NR: gi|325846050|ref|ZP_08169188.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 66 1 66 66 74 100.0 2e-12 MKETNHDKDCRKLTRQIKDNSESENKLAIHSHDKINSKEENTKNELIEKIFHRNNLNEAF RRVKSN >gi|325481735|gb|AEXN01000004.1| GENE 3 1085 - 1237 250 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWQIDERKEYALTRGGLIGDLVVTTNYEKSAKVIVLVKTRKDRTTGGINL >gi|325481735|gb|AEXN01000004.1| GENE 4 1221 - 1415 75 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227499542|ref|ZP_03929649.1| ## NR: gi|227499542|ref|ZP_03929649.1| hypothetical protein HMPREF0077_0284 [Anaerococcus tetradius ATCC 35098] hypothetical protein HMPREF0077_0284 [Anaerococcus tetradius ATCC 35098] # 1 64 6 69 69 95 89.0 1e-18 MPGSGKHIAKGKGVHREVESEGSPRQTLGLTNRNHIRQLRRISLQNIVKSNNYTEYVNVN VADR Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:20:29 2011 Seq name: gi|325481687|gb|AEXN01000005.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00029, whole genome shotgun sequence Length of sequence - 50204 bp Number of predicted genes - 51, with homology - 48 Number of transcription units - 19, operones - 12 average op.length - 3.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 66 - 1355 1834 ## COG0172 Seryl-tRNA synthetase - Prom 1391 - 1450 7.3 - Term 1368 - 1411 0.9 2 2 Op 1 . - CDS 1594 - 2256 986 ## COG0062 Uncharacterized conserved protein 3 2 Op 2 . - CDS 2266 - 3225 920 ## COG1484 DNA replication protein 4 2 Op 3 . - CDS 3225 - 3968 839 ## Apre_0537 primosome, DnaD subunit 5 2 Op 4 . - CDS 3973 - 4536 469 ## PROTEIN SUPPORTED gi|228003785|ref|ZP_04050771.1| acetyltransferase, ribosomal protein N-acetylase 6 2 Op 5 16/0.000 - CDS 4538 - 5863 1490 ## COG0305 Replicative DNA helicase 7 2 Op 6 9/0.000 - CDS 5863 - 6303 400 ## PROTEIN SUPPORTED gi|227499904|ref|ZP_03929997.1| ribosomal protein L9 8 2 Op 7 . - CDS 6284 - 8290 707 ## PROTEIN SUPPORTED gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein 9 2 Op 8 . - CDS 8292 - 9176 609 ## Apre_0532 hypothetical protein - Prom 9204 - 9263 10.8 - Term 9219 - 9265 7.2 10 3 Op 1 24/0.000 - CDS 9267 - 10013 261 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 11 3 Op 2 . - CDS 10015 - 10980 1075 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 12 3 Op 3 . - CDS 11009 - 12121 1522 ## Apre_0526 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein + Prom 12482 - 12541 13.6 13 4 Op 1 . + CDS 12561 - 14234 1798 ## COG1409 Predicted phosphohydrolases 14 4 Op 2 . + CDS 14188 - 14676 446 ## Apre_0524 metallophosphoesterase 15 5 Op 1 . - CDS 14699 - 15298 685 ## FMG_0084 N-acetylmuramoyl-L-alanine amidase - Term 15307 - 15335 2.3 16 5 Op 2 . - CDS 15351 - 16127 1295 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 16199 - 16258 7.1 17 6 Op 1 . - CDS 16273 - 17637 1412 ## COG4868 Uncharacterized protein conserved in bacteria 18 6 Op 2 . - CDS 17594 - 17752 238 ## COG4868 Uncharacterized protein conserved in bacteria - Prom 17773 - 17832 11.4 19 7 Op 1 . - CDS 17842 - 18963 1370 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 20 7 Op 2 . - CDS 18967 - 19437 743 ## Apre_1279 hypothetical protein 21 7 Op 3 . - CDS 19430 - 21235 1837 ## COG0296 1,4-alpha-glucan branching enzyme 22 7 Op 4 . - CDS 21237 - 21851 851 ## COG0572 Uridine kinase 23 7 Op 5 . - CDS 21853 - 22797 1143 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 22837 - 22896 6.8 + Prom 22703 - 22762 4.8 24 8 Tu 1 . + CDS 22887 - 23285 398 ## COG2764 Uncharacterized protein conserved in bacteria + Term 23290 - 23328 3.0 - Term 23175 - 23211 -0.7 25 9 Tu 1 . - CDS 23226 - 23783 505 ## COG0590 Cytosine/adenosine deaminases - Prom 23937 - 23996 6.2 - TRNA 23861 - 23937 84.3 # Arg CCT 0 0 - Term 23808 - 23849 4.0 26 10 Op 1 . - CDS 23999 - 25225 1375 ## COG1686 D-alanyl-D-alanine carboxypeptidase 27 10 Op 2 . - CDS 25234 - 26073 867 ## Apre_1286 hypothetical protein 28 10 Op 3 . - CDS 26130 - 26714 624 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 26801 - 26860 11.3 + Prom 26677 - 26736 12.8 29 11 Tu 1 . + CDS 26839 - 27246 589 ## COG1970 Large-conductance mechanosensitive channel - Term 27242 - 27285 4.4 30 12 Op 1 13/0.000 - CDS 27297 - 29354 2429 ## COG0550 Topoisomerase IA 31 12 Op 2 . - CDS 29355 - 30434 1041 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 32 12 Op 3 1/0.000 - CDS 30435 - 30791 233 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 33 12 Op 4 8/0.000 - CDS 30788 - 31420 692 ## COG0164 Ribonuclease HII 34 12 Op 5 . - CDS 31407 - 32243 946 ## COG1161 Predicted GTPases - Prom 32293 - 32352 13.0 - Term 32339 - 32374 2.8 35 13 Op 1 . - CDS 32383 - 33876 1177 ## BCE_5386 polysaccharide transport protein, putative 36 13 Op 2 . - CDS 33866 - 34681 804 ## COG3475 LPS biosynthesis protein - Prom 34722 - 34781 12.5 - Term 34769 - 34794 -0.5 37 14 Op 1 33/0.000 - CDS 34802 - 35149 488 ## PROTEIN SUPPORTED gi|227486508|ref|ZP_03916824.1| ribosomal protein L19 38 14 Op 2 30/0.000 - CDS 35136 - 35840 657 ## COG0336 tRNA-(guanine-N1)-methyltransferase 39 14 Op 3 . - CDS 35833 - 36318 589 ## COG0806 RimM protein, required for 16S rRNA processing 40 14 Op 4 . - CDS 36315 - 36539 481 ## Apre_1302 RNA-binding protein 41 14 Op 5 23/0.000 - CDS 36544 - 36789 399 ## PROTEIN SUPPORTED gi|227499934|ref|ZP_03930027.1| ribosomal protein S16 42 14 Op 6 8/0.000 - CDS 36807 - 38144 1505 ## COG0541 Signal recognition particle GTPase 43 14 Op 7 . - CDS 38156 - 38479 410 ## COG2739 Uncharacterized protein conserved in bacteria - Prom 38599 - 38658 13.1 - Term 39158 - 39206 13.2 44 15 Tu 1 . - CDS 39253 - 43764 6524 ## COG3468 Type V secretory pathway, adhesin AidA - Prom 43995 - 44054 11.5 - Term 44618 - 44663 11.4 45 16 Tu 1 . - CDS 44711 - 45934 1762 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - Prom 45974 - 46033 10.7 - Term 46015 - 46056 5.9 46 17 Op 1 8/0.000 - CDS 46101 - 47036 1199 ## COG0549 Carbamate kinase 47 17 Op 2 7/0.000 - CDS 47051 - 48055 1168 ## COG0078 Ornithine carbamoyltransferase 48 17 Op 3 . - CDS 48123 - 49352 963 ## PROTEIN SUPPORTED gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 - Prom 49476 - 49535 7.9 + Prom 49369 - 49428 11.0 49 18 Tu 1 . + CDS 49513 - 49653 138 ## - TRNA 49609 - 49685 76.4 # Arg ACG 0 0 + Prom 49742 - 49801 8.8 50 19 Op 1 . + CDS 49824 - 49904 270 ## - TRNA 49825 - 49898 80.0 # Gly TCC 0 0 51 19 Op 2 . + CDS 49908 - 50018 74 ## - TRNA 49909 - 49983 90.6 # Gly GCC 0 0 - TRNA 50081 - 50156 91.2 # Thr TGT 0 0 Predicted protein(s) >gi|325481687|gb|AEXN01000005.1| GENE 1 66 - 1355 1834 429 aa, chain - ## HITS:1 COG:PH0710 KEGG:ns NR:ns ## COG: PH0710 COG0172 # Protein_GI_number: 14590588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Pyrococcus horikoshii # 1 429 6 453 460 313 40.0 6e-85 MLDIKFVRENPELVKENIKKKFQDEKLVLVDEVIELDQKLRDVKTEGDNLRAKRNKTSKQ IGALMGQGKKEEAEEVKKEVGDINDRLVQIEEDTRKFQDQLKEKMQVIPQMIDDSVPIGK DDSENVEIERFGENVTPDYEVPYHVDIMESFNGIDLDSARDTSGAGFYYLKGDIARLHSA ILSYARDFMIDKGYEYHIPPFMIRSDVVTGVMSFAEMEDMMYKIEGEDLYLIGTSEHSMI GKFINSINEESDMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSKK FYDELWQNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQGKYFEVGSCSNLG DAQARRLKIRLRGEKGNYFAHTLNNTVVAPPRMLIAFLENLLQEDGSVKIPQPLQMYMGG MEKLVPKNK >gi|325481687|gb|AEXN01000005.1| GENE 2 1594 - 2256 986 220 aa, chain - ## HITS:1 COG:CAC0490_1 KEGG:ns NR:ns ## COG: CAC0490_1 COG0062 # Protein_GI_number: 15893781 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 7 193 7 192 193 118 35.0 9e-27 MLLVDRETMQKIDNFAINELKIPSLCLVERAALSVMDNINLDIRQTFAIVVSCGNNGADG LALARNLLAIGKNCYIYIVGNKNKASRDFIINYNACKNLTKEIYSIETIEDMDFLRENLD KVNTIIDGIFGTGLNRPVSGIYANIIDLINEKNIYTISIDLPSGFDANGQNNYGSYVDSD LIVCMQIFKKGLYEDRYFRDKTVVCDIGLPKIAIEKFTEI >gi|325481687|gb|AEXN01000005.1| GENE 3 2266 - 3225 920 319 aa, chain - ## HITS:1 COG:CAC3588 KEGG:ns NR:ns ## COG: CAC3588 COG1484 # Protein_GI_number: 15896822 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 4 317 8 320 329 174 35.0 1e-43 MSPNDNISRIIEKRRIKNKENQEKRKKEIYEKFPRMKVIDNTIASLGRRAAIDAQSGKNV DDYKNKLKELDREKEEILVKNSYPKDYLKIHYHCDICKDTGFVNTETCRCRKKLIIERKY SQSNISSLLKRENFRTFNTNLYSKNHYKDYPISPYENIIRVGKDAKNYVNNFGKVYKNLY IFGEVGRGKTFLINSIAKEILDRNYSVLYLTATKLFSFMNDYLYAFSEKKQDLQESYDLI FDSDLLIIDDLGSENDRNSNEANLFEIVNDRIINKKPIIFSSNYSEDEIMEVYGPRIFSR IIGSSHVMEIFGDDLRLLF >gi|325481687|gb|AEXN01000005.1| GENE 4 3225 - 3968 839 247 aa, chain - ## HITS:1 COG:no KEGG:Apre_0537 NR:ns ## KEGG: Apre_0537 # Name: not_defined # Def: primosome, DnaD subunit # Organism: A.prevotii # Pathway: not_defined # 1 247 1 251 253 251 56.0 2e-65 MKFKIQNLSLDMGETSFENMFLNTYVPMADGDSLKAFLLIYKDLKSLGQVDLEKIKRQLA FDDEKMEKIISYWTNMGVFRKKDGGDGEVYLEIISLRQAYFGNSSDNKSESMLDISKRKS VMFDQVERIIQRQLTPQDIRRIHETLDEYKQDPELVTEAFRQAKEVNNVDVKYVMGFLKT WRDQSVFSLNDLKIKEERAKLLREKSPRKYKSAKKVYRSKNKNSDAKTFAQKARDERFRR ILEGGDN >gi|325481687|gb|AEXN01000005.1| GENE 5 3973 - 4536 469 187 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228003785|ref|ZP_04050771.1| acetyltransferase, ribosomal protein N-acetylase [Anaerococcus prevotii DSM 20548] # 8 185 2 179 184 185 48 5e-46 MKIIGKDDHIYLKKLDLDDAYDLRKWDMNEDERLKGYNYGNFSQIDCEVWFMNVNIYRKR YFAVKKIEDDSLIAFIGLKNFNPILRKSELGIVFDPKYTSKGYGYKAMKILLDYYFNDLK FYQLDLDVNDFNKRAFKLYEKLGFKKTGKTAEVFENQEINPDGENFFYRNGKVYSVITKM RIRKDGR >gi|325481687|gb|AEXN01000005.1| GENE 6 4538 - 5863 1490 441 aa, chain - ## HITS:1 COG:CAC3715 KEGG:ns NR:ns ## COG: CAC3715 COG0305 # Protein_GI_number: 15896946 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Clostridium acetobutylicum # 1 440 1 442 442 362 43.0 1e-99 MEESLRQMPSDISSEMAIIGCILKKSETIDQAIQLVKPYEFYDSRCQRIYKTLVNMYQKD IKIDEVSLISKLKSENILTEVGGEEFIVEITLSSFYTPNMDQYCENVKEKALLRALITAC DDIVGKSYEQKKDAKEVIEMAESRIFEISQKNLDNGLVRVSETMDETIKQLELLSLNEGK ITGVTTGISSVDDKLSGLQSSQLILLAARPAMGKTALGLTMAWNAANAGKSVAFFSLEMS TYQLNQRLISMVSMIDLEKIITGNLEADEWIEIINAITKIKEKEIYVDETAGITLSELRS KCKRLKAEEGLDLIVIDYLQLMTGEGRFDNRQQEIAQISRGLKSLSKEINCPVLSLAQLS READKRSDHKPILSDLRESGAIEQDADVVMLLYREDYYDEDDNPNVAKVILAKHRNGPTG LMELFFHKQCTTFRDLSHEEE >gi|325481687|gb|AEXN01000005.1| GENE 7 5863 - 6303 400 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227499904|ref|ZP_03929997.1| ribosomal protein L9 [Anaerococcus tetradius ATCC 35098] # 1 146 1 147 149 158 53 5e-38 MKIILTDDVKKIGKKGEVVNVKQGYFRNFILPNNLGVEANKENLAKLNEHLEELKKEEDK NIKEAKENKEKIEKTDVTIKVKAGENGKLFGSITNMDIKKALDKKGIEVDKKKIDKADID SLGSYEVTIKLYQQISAKLKVNVEAE >gi|325481687|gb|AEXN01000005.1| GENE 8 6284 - 8290 707 668 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein [Aster yellows witches'-broom phytoplasma AYWB] # 26 666 64 699 849 276 28 6e-90 MKEKLKYFTRENYIFILALPLLISIILFFYEKIFATIGLILVALLYFYIKKIDENNEDFF QAYIDEMDYSFDEITKNVVFQMPFPIVILEEGKTIKWHNSNFKGLFEAKNLIGKSINSFI PDFNDIDFTKESDKAISVNIYDKVYEFYYSTIKREKYGKELTFVYGIDNTSDENIKKIFK DRRLVVLSMYIDNYDDLRQSTKASDRSSLTGEIDKIIMNYFEQYGAMVRKYENDRYMVMI HYDDYVKIYESKFKILDLVREVKKGNSIEPTLSIGVGLSGSKPIDIYEESRVSIDIALSR GGDQVVIKEGDNYEYFGGKSKATEKISKVRSRVISQALKRMVENSSKVFVMGHNNPDMDS FGSALGIYEGIKSIGKDCYFVLNGINKPIENIYNRTIEDLEGFREDIVTEIKALEMMDQG SLVIVTDNHRKNSTEAPSILDKTDQIVIIDHHRRGNDYIRNATISYIEPYASSASELVTE ILNYFDESFKARVPVAEALLAGLTVDTKNFVYQTGVRTFEAASILKRWGADSIIIKRMFK DDFQIVKYKSEVIADSTVVNDFIAIGHFNREMDGSTLIASQAADDLLNIKGVRASFVLTR SNDKIHISGRSLGDISVQLILERIGGGGHLTSAATQLDMSIEEAEIMLKKAIKEYLEEEL EDYEDNTN >gi|325481687|gb|AEXN01000005.1| GENE 9 8292 - 9176 609 294 aa, chain - ## HITS:1 COG:no KEGG:Apre_0532 NR:ns ## KEGG: Apre_0532 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 9 292 8 294 299 82 28.0 2e-14 MNEYLNKNKKIASIIFGLINVSLAFLSSYYLIFAFFIPIFTAIKLYEMNDKNKMIFLFTS ALFSSIFNMEICLYIMFPMIIFGNFLFDLIKKNKTDKYSIKTLTVILSVLSLSIIGYLYY KSGIKIGDLTKDFEKIIAGQNIKINKEMIEKSLKTIPSFVVIFSLIYSIISLKLVRNYLN FKYEKIRDLRKINTIRLVPKDLSLIFGFLILAVIVCKLLKTSNEFIILNTIVTLKSIFVL NGALLIDYFISFRRNKVSKFLNYLFIFLLFAYISEAIALVGIIDVFINLRKKVR >gi|325481687|gb|AEXN01000005.1| GENE 10 9267 - 10013 261 248 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 24 226 37 250 329 105 33 7e-22 MSKLELKNVSKVFEKIEEDEKTHALKNIDLSIDNNEFVSIVGPSGCGKSTMLRLISGLIR PSQGKILLDGKEIEKPSSKKGMVFQKPTLFPWLTVGENVGFSGSLKNEEKINQKEIDLML EKVGLSEFKNSFPKQLSGGMAQRVSLIRTMIARPEVFLLDEPLGSLDAFTRMNMQDEILN LWQEIKNLMIMVTHDVEEAVYMSSKVIIMEPRPGRVKEIVDIDLPYPRDRTSDKFINYRN KILKILNY >gi|325481687|gb|AEXN01000005.1| GENE 11 10015 - 10980 1075 321 aa, chain - ## HITS:1 COG:MA0064 KEGG:ns NR:ns ## COG: MA0064 COG0600 # Protein_GI_number: 20088963 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 111 286 47 219 262 96 38.0 7e-20 MDNEKTKGEKNSIIKKLFPIIFGIFAILEYLYFPNHQKNMKATPVYLYFLIFLLGLYLVF FIISFKNEKISDRLGYKSPLYAFVFAILIIYDLLTLKFAVLPLPYFAWLDMIMNSMIADK RFLLESTLASLKLLFTGYFIGAILGIITGILAGYSKKVDYWVDPFLKLLGPIPTTTWIPV VMVLATSLFGGAVFIIGLGVWFQTTLATMTGIKNIDKSYYEAAKTLGANENELVRKIAIP SASPNIFQGLISGMSSACTSLIVAEMLGVESGLGWYITWKSSWADYSSMYGAIIILALTF IIVNMILKKISSKALKWQKEV >gi|325481687|gb|AEXN01000005.1| GENE 12 11009 - 12121 1522 370 aa, chain - ## HITS:1 COG:no KEGG:Apre_0526 NR:ns ## KEGG: Apre_0526 # Name: not_defined # Def: ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 11 365 5 350 357 347 50.0 4e-94 MFGGIMKVKSKIVGVLLIGSLVFTGCKSQLNNGENNPSESMSNVSESQNVKTEDVQKIAK ENAKKDIKEEPRYKDKIKLGYSGDLCLGGPNIANLNGYFKDRDVEVEFVNTKNPKDALGS GKLDGLVGEFAGMVVPATKGLDIVFSSASHTGCKSLYVLNDSEITKTKELEGKNLAITNG IGNSNHNTALRFFNHDDVNPDKVTYKQVDNAAVIQAMKDGEIDSAVLDDQFAKQFVDKGE IRSIRSMTHDEDFGKEVCCVLAFNGKFAKENPQIADKVATAIQEANNYMQNYPKEATQKL YDNNLASGDFDAGLDLIKSYDYSVKNDLAEDTLKSIFTDYKEIGLIKDQRSVDQLMKSYW LPMGSFYDEK >gi|325481687|gb|AEXN01000005.1| GENE 13 12561 - 14234 1798 557 aa, chain + ## HITS:1 COG:lin2791 KEGG:ns NR:ns ## COG: lin2791 COG1409 # Protein_GI_number: 16801852 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Listeria innocua # 4 328 36 310 443 80 26.0 7e-15 MENKNIKLSILSDTHILARDLMADNKEFNMAIKYDRKFLVEGEGLLRSALKLASENESKY IIIPGDLTKDGEKKSHLEVSKILKEWTYEDKSRKIFLIPGNHDINNKSAFDYKNLKNTQY IKPKEFFEIYDFLYKDSVLEYYKDSQIYKTYLGEINKKYEREFENSYYAQGYGSYLARIN PNLDEKNSLTLIFIDTSIYSCDYEQNHKDGKNNVVGACDKNILKWAIEKIDQAKKRADMV FVISHHAFIPNFRDQRLVLGPFIIKNWNEKFKDKDPRINNKLPIEVLADCGVKFLFTGHL HENGTAKYKSILENEIFNIQTGSTVTYPLPIRHINIYDDLKDFSGFSIDMKTQLIKKFEY ENLNGENIKIDNSIAYALKNQLSLKDVLFNYVHSMAKNPIISQMDIKKFLIERLNTNLNL DLSNKGYVKEILKEFSFKFPIYIEKFGNVNLIDADGEIFIKLDSYKSHALIKAGNLEACI EILIRQFEDKIMTTDNMIYYYDKLVKKALSMPISTDKHNLYDFSNYIYQYKALDEKTTPS YVVEFFSKIKQSRLLNN >gi|325481687|gb|AEXN01000005.1| GENE 14 14188 - 14676 446 162 aa, chain + ## HITS:1 COG:no KEGG:Apre_0524 NR:ns ## KEGG: Apre_0524 # Name: not_defined # Def: metallophosphoesterase # Organism: A.prevotii # Pathway: not_defined # 7 161 560 714 721 129 45.0 5e-29 MNFLAKLNNPDYSITEEVIDYCQDEINEIFEFLTMNIRFEIDGSKDKFFDKLISIKGLFF RSLIRYLKRKSNNLYDLITFISKFILKKRRVNGVDLAKYVISYRKVTNIKQNIGKKMLGR ANLRSYIVDLVKSINNEVIETYENEDLNERDHYFSYVEYEDE >gi|325481687|gb|AEXN01000005.1| GENE 15 14699 - 15298 685 199 aa, chain - ## HITS:1 COG:no KEGG:FMG_0084 NR:ns ## KEGG: FMG_0084 # Name: not_defined # Def: N-acetylmuramoyl-L-alanine amidase # Organism: F.magna # Pathway: not_defined # 76 199 310 437 437 67 35.0 2e-10 MKNKLIYLLFLSLIFTGCSKKSTRIIETSDNLENSNISSNVTDNNISNKVSDDPSFIIEN IEENKLSEEDYEQDSKVDDKNLLTSYGSYGASLVDKSREGWERGYVDYVKFENGYLIFSG ILNYNEEMTGSFGDSTFDEGVYKFKLDPNVKIMAKSGLAKPEMMNEEEFINYLEKCRRSG LGFVVNVDNSMAYEVIISS >gi|325481687|gb|AEXN01000005.1| GENE 16 15351 - 16127 1295 258 aa, chain - ## HITS:1 COG:CAC2712 KEGG:ns NR:ns ## COG: CAC2712 COG1024 # Protein_GI_number: 15895969 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Clostridium acetobutylicum # 1 254 3 256 261 280 58.0 3e-75 MNNVKVDVKNEIAYVTIDRPKALNALNSETLKELNETFSDIRERKDVKVLILTGGGEKSF VAGADISEMVNATPQEGRAMSMLAYETFNMLEEMPQVTIAAVNGFALGGGCEISMACDIR VASKNALFGQPEVGLGIIPGFGGTQRLPRLVGKGIAKELIFTTDSIKADEAYRIGLVNHV VEKEELMDYCTKMAEKIMSKASYAVTLAKQVINLGLESDLHTGIQLEANTFASTFETHDK KEGMTAFLEKRKADLSDF >gi|325481687|gb|AEXN01000005.1| GENE 17 16273 - 17637 1412 454 aa, chain - ## HITS:1 COG:SP0341 KEGG:ns NR:ns ## COG: SP0341 COG4868 # Protein_GI_number: 15900271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 12 445 51 484 494 479 54.0 1e-135 MMLMHQGFCQDFLPDSKLQMLKKLKDITEIVIVINANDIESNKIRSDLDIGYDSEVLRLK TSFEDLGFFVNSIVITQFDNQPSAIKYGKYLDSLNIKNYKTYDIEGYPNNIPNILSKNGF GKNDYIETQRDLVVITGPGPGSGKLATCLSQMYLENERGINAGYAKFETFPVWNLPLKHP VNIAYEAATADLNDVNMIDPYHLEAYGKTTVNYNRDVEAFPILKQMFEKISGSSPYKSPT DMGVNMVGFCIDDEEETIRACKNEIIRRYYNALVDFKLAKTDYKAVEKIELLMSSLNLEA SDRKVSIVAREKQKEKNAEIFAIELSNGKIVTGKKSKLMSSPAACILNTLKEISGINDDI PLISPHILEPVLKLKEEILKERDESLSVNDVLIALSISATTNPVTHHALKNLNKLNGLDA HSTIILDESDKKTLLKMHFNFTQDPILDQAYLNI >gi|325481687|gb|AEXN01000005.1| GENE 18 17594 - 17752 238 52 aa, chain - ## HITS:1 COG:Cgl2942 KEGG:ns NR:ns ## COG: Cgl2942 COG4868 # Protein_GI_number: 19554192 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 5 50 4 50 495 63 65.0 1e-10 MVEKAFNNDKYIKIQSEKIEERIREFDKLYLEFGGKLFDDAHASRVLPGFFA >gi|325481687|gb|AEXN01000005.1| GENE 19 17842 - 18963 1370 373 aa, chain - ## HITS:1 COG:CAC2766 KEGG:ns NR:ns ## COG: CAC2766 COG1477 # Protein_GI_number: 15896021 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Clostridium acetobutylicum # 83 356 33 295 319 132 33.0 1e-30 MNKKIKLTIVGLGLCLALSSCNKKVEKVKPEAKSKVESSISTENSNQDVKKYETTIYDYF DTITTFSAYCKNEEEFNKYKDLVEKRMAEYHKLFNNYDKFDGVNNVTTLNENAGKEKVKL DKKIIDLLNEGKKWYKETDGDINICYGRVLKIWLDHREAALEDEKNAKLPSEEELKEAGD HKNIDALEIDEKNQTAYINDKEVQVDIGGIGKGYATELIKDELIEKGLKSGILSVGGDVA IIGENPTRKDGNFKIAVQDPSLSEEHPYSSIVAIKNTSLVTSGDYQRYFEIDGKRYHHII DPSTNYPSTNFKSVSVMTDDIAKADALSTALFIKNLEEGKKLAKKYKVEAYWIDQDGNTF KTENWDKYEIEEN >gi|325481687|gb|AEXN01000005.1| GENE 20 18967 - 19437 743 156 aa, chain - ## HITS:1 COG:no KEGG:Apre_1279 NR:ns ## KEGG: Apre_1279 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 152 4 152 155 123 47.0 3e-27 MSRNKEAINLSWLVEKWTIWDNLYLKNIWLNLDTLDLVRINDDMDNNDDIEESYIDIENN MDEFVCMPGREAVNKKLAREVFMDYLDSQDRDRLFENYNQYSADEEFLDLIYELGLEDKL QEFREKVAGSILLNWAQEEDIKVSKDMEVIDLYNRD >gi|325481687|gb|AEXN01000005.1| GENE 21 19430 - 21235 1837 601 aa, chain - ## HITS:1 COG:CPn0475 KEGG:ns NR:ns ## COG: CPn0475 COG0296 # Protein_GI_number: 15618386 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Chlamydophila pneumoniae CWL029 # 25 545 117 658 720 403 38.0 1e-112 MDVKLLEVDYKKIEDYLSGNSKIGYEIFGAIKKDDGYIFRIYAPDADIVYIKGDFSNWQE ISMFKNHKYGYFYKFIGAKEGDYYKYVIENNGYKFEKFDPYGNYFDESPEFATKIIDTSF NFSDKNWLKKREKNLDKPLNIYEIHIGSWLRYNSMPNFLDIVDKLISYVKDMGYTHIEIM PITEHPYYPSWGYQVSGFFAPSSRYGSMKDLQKFVDLCHQNDIGVIFDFVVVHFAEDYYA LKNFDGQSLYESDYKDLQYSEWGSLNFDYSKGHVRSFMKSAINFWIEKCHFDGIRIDAVS NMIYYDGNKDRGVNHHNIKFLKDLNKDLSKDYPSFMKIAEDSSSYEFVTEKTGKENLGFD YKWDMGWMNDTCKYFEVDSMNRHMYQGKINFSMFYFYNENFLLPLSHDEVVHLKKAMINK MNGFYEDRFKQLKLLNTYQMTHPGKKLNFMGNEFATFDEWNENVSLNWDILKFPIHSAFK NYVKDLNHLYKDNPSFYKDDYKEEGFLWKVVDDNENSVFAYERLANEKRFLVVLNMTNTY KKSYPISYDENLIFVEKINNMWEKYGGYKYKRENIKISKGENLKLELWEYEAVVFEIKEN E >gi|325481687|gb|AEXN01000005.1| GENE 22 21237 - 21851 851 204 aa, chain - ## HITS:1 COG:BH1275 KEGG:ns NR:ns ## COG: BH1275 COG0572 # Protein_GI_number: 15613838 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Bacillus halodurans # 5 204 7 207 211 192 47.0 3e-49 MDTKIIAIAGGSASGKSSIVEYIKNYFSKDLYVIGHDNYYKAHDDLSFEDREKLNYDKPS SFDNDIFIKDLLDLKAGKDIDMPTYDYKIHTRSKKTIHVSPKKIILIEGILVLYDKRVRD ILDTCVFIDADSDVRLQRRILRDTKERSRSLESVLTQYIKQVKPMHEKYVEPTKKYADII IPRGAKNTRGIEILIKHIEDLIEE >gi|325481687|gb|AEXN01000005.1| GENE 23 21853 - 22797 1143 314 aa, chain - ## HITS:1 COG:CAC0089 KEGG:ns NR:ns ## COG: CAC0089 COG0111 # Protein_GI_number: 15893385 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 1 313 1 316 318 259 45.0 5e-69 MKISLIDPLMVDNEIIEKHKEKIDGLGHEFQYFNQSAKDDDEIIERLKDSQVAIITNNKF SKKVIDNTNLKLIDVAFTGFNHVDMAACEENDIIVENASGYSDDSVAELVIGLTIAVMRK FDQNNKNIFEDESFNLLGQIIKGKTVGIIGTGKIGTRVVEIFKAFGANILAFNRSEKDQV KNLGAKYVSLEELLKNSDIVSIHLPQNDETIGFIGKDQLDLMKDKAILINCARGPIVDNT YLAKLLNEDKLRAGIDVFDMEPPLDKDYPLRNAKNVLLTNHVGFFTEEAMKIRCEIVFDN LYKFLDGKIVNRVN >gi|325481687|gb|AEXN01000005.1| GENE 24 22887 - 23285 398 132 aa, chain + ## HITS:1 COG:CAC3689 KEGG:ns NR:ns ## COG: CAC3689 COG2764 # Protein_GI_number: 15896921 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 9 128 10 133 137 57 28.0 5e-09 MAVGLSFKNGKCLEAIEYYCDIFDIEPPKKLIRYSDFEQYNFPLEVRDRIYNSKLEIYGN NVYLFDTTDDKHWVSGNNGRVVIETNSENLYKAYSKLQKESKVLMQPQKINKKLFTTLID KYNVVWHIIATN >gi|325481687|gb|AEXN01000005.1| GENE 25 23226 - 23783 505 185 aa, chain - ## HITS:1 COG:BH0033 KEGG:ns NR:ns ## COG: BH0033 COG0590 # Protein_GI_number: 15612596 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Bacillus halodurans # 2 153 4 155 159 140 44.0 1e-33 MDDYFYMKEAINEAKLARLEEEVPIGCVIVKNGKIIARSHNYTYKGKSALKHAEILAIDK ASKYVGDFRLEDCTMYVTMEPCSMCAGAIINSRIDRLVIALADVKRGACGSNTNITGDRS QLHFLDAEFGLMKDQSLEILQSFFKKLRDRRKKKKKILASKKQESFLICSNNMPNYIIFI NQGSK >gi|325481687|gb|AEXN01000005.1| GENE 26 23999 - 25225 1375 408 aa, chain - ## HITS:1 COG:BH1535 KEGG:ns NR:ns ## COG: BH1535 COG1686 # Protein_GI_number: 15614098 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus halodurans # 41 394 33 380 387 162 30.0 2e-39 MKRKYKISALILAILFLFSPLNVFADDSIAKEGDNVVGADKDVRAYLIGNQESGDIFYQK NADKTYPIASMSKLMTFLLTREAIDSGKISYDTKVKGTKEAEDLTGPEYSSLGIKEGEEY TIKELITGLIVVSGNDCANLLASKISGSEDNFAKEMNKKAQELNLKSQKYYNASGVNTED DTQNSSSAKDLFELSRIILKKYPDILEYSNMDGIDDNKKDIHKKSTIPLKGDIKGVDGLK TGTTEEAGSCLITTIDMGKFDPKNDYRAISIVMGAKDHPTRDAAMTDLIYYVSRYFNYKK LADKQTPSDFVKVNSVKEGYVELYPDQDVGFIIKNKSMPNVKTDIKKDIKAPIKKGEKLG KVYISYEDKSYQVNLISKKDQTKASNFTRIKRTISDACNFLVECIIAR >gi|325481687|gb|AEXN01000005.1| GENE 27 25234 - 26073 867 279 aa, chain - ## HITS:1 COG:no KEGG:Apre_1286 NR:ns ## KEGG: Apre_1286 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 277 1 274 276 191 40.0 3e-47 MVMKNYIIEKFNDYSKSNDKVKAIYFVKEENNNEHFANIYAVYSDIIISKIKEDLENIFN DYALINKRKDYFKHDKKNQQFTKFEIYTNDSTKIGLTIISLDLAGDFIKLCPGNIEFISD QINLKEEVTDNKEVYKLPRGFEFDEASKNFYSLALDVSFYLMSRDMISAGFKMQAMRDEL FKLLNWYIIDKFNKAKDAGEFGENLIHTLEADIKEDVLMTFGAKDIGDIYNSIFKACQLY RRIGMELANKFDFTYPKRDDVYTLKLLRKNYKKMESLEV >gi|325481687|gb|AEXN01000005.1| GENE 28 26130 - 26714 624 194 aa, chain - ## HITS:1 COG:SPy2170 KEGG:ns NR:ns ## COG: SPy2170 COG0494 # Protein_GI_number: 15675908 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 16 183 18 186 213 117 40.0 1e-26 MKNLQVDDEFYKKLSKYAVFIPIINIDGKDHILFEVRSDIVSQKGEVSFPGGGVNEGESF EMAAIRECREELNLDEKDISLKGYSSMILSSSDRIIKAYFGRINKKFEHISYNVEVSSIF TVSIDYFKNNPPEKYRAKMIMDLPDDFPFEKIPNGRDYNFWQRYHTFYFYDTKPVIWGMT AKLLNDFIKYNALK >gi|325481687|gb|AEXN01000005.1| GENE 29 26839 - 27246 589 135 aa, chain + ## HITS:1 COG:BMEI1605 KEGG:ns NR:ns ## COG: BMEI1605 COG1970 # Protein_GI_number: 17987888 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Brucella melitensis # 1 97 7 116 144 85 41.0 2e-17 MWKEFKEFISKGNVVDLAIGLIMGSAFTAIVKAVVDGILMPIISGLTAGVDYEDIVLNFF GAKLQIGSVINAIITFLIISLFLFIIVKTLNKTKKEEVEEETTKICPHCKSEIDIEATRC PHCTSKLEGFSEEIK >gi|325481687|gb|AEXN01000005.1| GENE 30 27297 - 29354 2429 685 aa, chain - ## HITS:1 COG:SP1263_1 KEGG:ns NR:ns ## COG: SP1263_1 COG0550 # Protein_GI_number: 15901123 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Streptococcus pneumoniae TIGR4 # 4 544 15 553 553 575 54.0 1e-164 MAKNLVIVESPTKAKSITKMLGSNYKVRATYGHLRDLPKSKLGVDIEDNFEPKYIKVRGK AKTINALKKEAESVDKVYLATDPDREGEAISWHLQYLLGLDENELNRVEFHEITKNNVKN AIKNPRKIDQNLVDSQQARRIMDRIVGYEISPILWKRVKSGLSAGRVQSVALKLIVDKQK EIDAFVPEEYWTITAKHKESKIEFESEFYGSKSKKMKISNENGAEKILNRIDKDKFEVVD IQKTKKKRKPQKPYTTSTLQQDASNKLGFSTKYTMSLAQQLFEGIDLGQKGRVGLITYMR TDATRLSNEIIGESLSYIKEKFGQKYASKGNSYSKKAKTSQDAHEAIRPTSIYNDPISVK EYLTDQQYKLYKLIWTRVVASQMADYEYLSTSISFDTNGVIFKTNGKITLFDGFMKVSNA KENENILPDLKKGDIIKAIDIKKDQHFTKPPANYTEASLVKTLEEYGIGRPSTYSSTIAS IISRNYVEFEQRKILPTKLGIRVNDFLQESFDDIINVKFTAKMEDELDKIAQDEVYWKDV LKSFYSGFEKDIKKVSKDTTDYKVKDKILDEKCPKCGHLLAEKHGRNGKFIGCTNFPDCD FTKSIIKTTGVKCPECEDGEIIEKVSKRGKRFYGCSNFPKCDYATWDPPTGEKCPECGDL LVHKKNRSTDEIKCNSCDYVKEKRR >gi|325481687|gb|AEXN01000005.1| GENE 31 29355 - 30434 1041 359 aa, chain - ## HITS:1 COG:lin1313 KEGG:ns NR:ns ## COG: lin1313 COG0758 # Protein_GI_number: 16800381 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Listeria innocua # 43 286 48 285 286 193 42.0 3e-49 MKKKELLLYFNFINLSNKIVLDFCENLDMDNFFDLDRKIFDKLTKKNKEKIFSKKNLENF KTYKEKVIKGNYKICTIYDENYPINLSFIDDRPALFYYKGKIEEEDKNAIAFIGARKCTD YGKWSCKKIVEGFKDTNIRTVSGLAYGIDAISHKVSLENNIKTIGVIGSGLDIIYPKANK YLYEKIEEKGLIISEFSLETPPNSYNFPRRNRIISGLSKGVCVIEAKEKSGTMITTNFAL DQGREVFCLPGNINSIYSKGCNKLIQEGSKLVMDASDIIDEIEDFKNINKKKRKINLDGL DKDTANVVKYIIDKPSSSADEISQNLSIAIEDVNYILIFLELNDYIENMGNNEYVCKGD >gi|325481687|gb|AEXN01000005.1| GENE 32 30435 - 30791 233 118 aa, chain - ## HITS:1 COG:CAC1763 KEGG:ns NR:ns ## COG: CAC1763 COG0792 # Protein_GI_number: 15895040 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Clostridium acetobutylicum # 1 116 1 120 122 77 41.0 5e-15 MKSKKRSIGDFGEDIATRYLEKKGYKILERNFLKSFGEIDIIAIKDDILTFVEVKTRKND KFKPASLDVDYFKQERIKKTAQAYLIEKNLGEFLISFDVCEVYLEEKMIHYIKNAFGD >gi|325481687|gb|AEXN01000005.1| GENE 33 30788 - 31420 692 210 aa, chain - ## HITS:1 COG:SP1156 KEGG:ns NR:ns ## COG: SP1156 COG0164 # Protein_GI_number: 15901021 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pneumoniae TIGR4 # 23 198 71 246 259 179 51.0 2e-45 MKKPRYSEFNDEIKNEIHEKYDLIAGIDEVGRGPLAGPVVACAVIMKKDSHIEGITDSKK LSKKKMKELYGKIIDDSISYSFGYANNILIDKINIKEATKLAMKDALEGLEKTPQIVLID AERIDTDIKQLNIVKGDLYEYAISCASILAKVRRDKIMENFSKIYPYYSFETNAGYGTKK HYQGIEKYGECPIHRRTFLRKFYQRQLSFI >gi|325481687|gb|AEXN01000005.1| GENE 34 31407 - 32243 946 278 aa, chain - ## HITS:1 COG:CAC1761 KEGG:ns NR:ns ## COG: CAC1761 COG1161 # Protein_GI_number: 15895038 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 2 277 5 282 283 251 50.0 1e-66 MNINWYPGHMKKTKEEIINSLKLVDIVLEVIDARIPESSRNPLISEITEKKDRIIIMNKT DLSDPIENEKWIKKFADSGIKAIKMNSKEKINTRQIYNIAKEILKEKFIKNEEKNIENEN IRMMVVGVPNSGKSTFINNIAKRKGAKVGNRPGVTQQKQWIKTKEKILLLDTPGVLWPKL EGDSGLHLSFTNAIKDEILNVEELCLKFLEFMKESYPENLKERYKIDPSMTPIEIYDQIG LRRGAIIRKGEVDYTRCANLIFNDFRSGKLGRITIEKA >gi|325481687|gb|AEXN01000005.1| GENE 35 32383 - 33876 1177 497 aa, chain - ## HITS:1 COG:no KEGG:BCE_5386 NR:ns ## KEGG: BCE_5386 # Name: not_defined # Def: polysaccharide transport protein, putative # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 1 476 3 467 508 294 39.0 6e-78 MKTKVTLLNSVSSLLLQIVTIISGFIIPKILLVYFGSSVNGLVSSIGQFLSYIALVEGGI TGVIYANLYKPLLDKDSKKISRILVTSKRFYRNIGYIFIAYSIILAFVYPIFINKDFGFT YVFVLTIILSITLFIQYMFSLTLRSLLIVDKKIYVISFTQIGISILNIVFTYLSAIIYPN IHILKFVSGSMYIIQPLIYNHYIKKNYNISWDEKYDNRLLKDRWNGFAINVAAFIHTSTD ITILTIFANLKMVSIYYVYALVTNGLGSLVKSISSGIEPVIGQAYAKNDPEDLNFKLDMY EFIIFFLVGGLFTVAALQISPFVSLYTKNITDADYFQPIFGYIIVLSEALYLIKYPHLNL AYSANKFKEITIPAYIEAIINILVSIILVNKIGLVGVGIGTSLAMTYRMIFHVRYTKKIV EGRKQSIFYKKLFLIIISTALSIIICQFFKINEPTFLHFILGASIDSLIVLFVYGITALL FFKKELFYTLSYLKIRK >gi|325481687|gb|AEXN01000005.1| GENE 36 33866 - 34681 804 271 aa, chain - ## HITS:1 COG:L15884 KEGG:ns NR:ns ## COG: L15884 COG3475 # Protein_GI_number: 15672196 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: LPS biosynthesis protein # Organism: Lactococcus lactis # 6 271 3 274 278 114 30.0 2e-25 MRKKYKLSKSEVHEELVKLLKIVDEFLKKNNIEYSISYGSLLGAVRHKGFIPWDDDIDIS IKRSEYNKLLEILRKNNEISDGIICQGVALDNLDIPFLKVVNTNIESREEFEGGYIDGYL WVDIFPADNVPKHFKKLFFFWIYKVLRKNYYFARCHEYGWESNAKKCLANTIAMKIAKRK SGKYYAKKLESLSSRIKESEYISNNVFGTSSSRVLPKEIFDSYRDYQFENITVKGVSDYA TYLKINYGDYMKLPKESERRDHGLSAWKYED >gi|325481687|gb|AEXN01000005.1| GENE 37 34802 - 35149 488 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227486508|ref|ZP_03916824.1| ribosomal protein L19 [Anaerococcus lactolyticus ATCC 51172] # 1 115 1 115 115 192 82 3e-48 MELIKKIENEQLREDNPDFRVGDTVRVSYRIKEGDKTRLQDFEGVVIKINEGNLGKTFTL RRLSYGVGVERTFLYHSPRLEAFKIVRRGKVRRAKLNYLRGRQGKAAKVKEKTNY >gi|325481687|gb|AEXN01000005.1| GENE 38 35136 - 35840 657 234 aa, chain - ## HITS:1 COG:CAC1758 KEGG:ns NR:ns ## COG: CAC1758 COG0336 # Protein_GI_number: 15895035 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Clostridium acetobutylicum # 3 234 6 238 242 220 48.0 2e-57 MNKITILTLFPESFEFLKSYGVIGKAIEKGLIEINLVNIRDYSKDKHNKVDDTVFGGAAG MLMKPQPIYDALIANKSSKSKVVYMSAAGEILNQKLAIKFADFEDLVILCGHYEGIDARI TNHYVDYEVSIGDYVLTGGEIPAMVLIDSLSRFIGGVVGKKESLVTDSHYNGLLQYDEYT KPRNFNGYMVPKELYSGNHKLVDEWKKKSSLQKTKRVRRDLYDRYIKEDHDGIN >gi|325481687|gb|AEXN01000005.1| GENE 39 35833 - 36318 589 161 aa, chain - ## HITS:1 COG:SP0778 KEGG:ns NR:ns ## COG: SP0778 COG0806 # Protein_GI_number: 15900672 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Streptococcus pneumoniae TIGR4 # 5 155 6 163 172 89 37.0 3e-18 MKITVAEIITTHGIKGNLKIKSFSDNEKRFEKGSKLFLDGNLVTIESSFKHKGSIIIKLK DYDDINEVEEFIGHELTIEEEDLEKLGNGEYYLFDLIGLRVYEKNQELGFIKDVITGVYP NDIYVIEKDGKEVYFPALNATIKNVDLENKKIEVENFKDYE >gi|325481687|gb|AEXN01000005.1| GENE 40 36315 - 36539 481 74 aa, chain - ## HITS:1 COG:no KEGG:Apre_1302 NR:ns ## KEGG: Apre_1302 # Name: not_defined # Def: RNA-binding protein # Organism: A.prevotii # Pathway: not_defined # 1 74 1 74 74 79 78.0 6e-14 MKELVKLIVTELVENKDAVGIILEEDNGEVDIKINVAEADKGRVIGKGGNIINSIRTIAR ACAVKEDVKVNIRI >gi|325481687|gb|AEXN01000005.1| GENE 41 36544 - 36789 399 81 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227499934|ref|ZP_03930027.1| ribosomal protein S16 [Anaerococcus tetradius ATCC 35098] # 1 81 1 81 81 158 92 7e-38 MAVKIRLKRMGQKKRPFYRVVVADSRSPRDGKFIEEIGTYNPVSEPKEFKVDNEKAKQWI KNGAKPTSIVEKLFNDNNVLA >gi|325481687|gb|AEXN01000005.1| GENE 42 36807 - 38144 1505 445 aa, chain - ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 430 1 433 451 473 60.0 1e-133 MIFSNLSEKLQDTLGKLTGKGKLSEKDIDNAAREIKLSLLEADVNYKVVKNFIKKVKERS MGQDVMESLTPGQTVIKIVNEELTNLMGKENSKLELKGSTPHVVLMVGLQGSGKTTHSGK LVRKLKKEGRNPLLVALDVYRPAAIEQLKVVGGQAEVEVFEKGKQDPVKTANEAKEYARR NNNDVVIMDTAGRLQIDEDLMDELKNIKKAVKPDEILLVVDAMVGQESVNVAKTFDDYLD ITGVILTKLDGDARGGAALSIRQVVGKPIKFIGTGEKLDDLEAFHPDRMASRILGMGDVL SLIEKAEKQVSLKDAKELEEKMRNQTYTLDDFIEQINQIRNMGPLEDLLSMIPGVNNKML KNVNVDEKGFVRIEALISSMTKEEREKPEIIGKSRKERIAKGSGVDMNELNKLLKQFKEL KKMMKQFTNMKKGRKGKRKFNMPFF >gi|325481687|gb|AEXN01000005.1| GENE 43 38156 - 38479 410 107 aa, chain - ## HITS:1 COG:CAC1753 KEGG:ns NR:ns ## COG: CAC1753 COG2739 # Protein_GI_number: 15895030 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 105 1 112 116 61 38.0 3e-10 MEKLVQVARLFDTYGSLLNEKQKDVINCYYNEDLSLNEIAQNNNKSKQAISDMVQRSVDK LFEFENELSLLKKKDELRDDLSLLRELIESSNEDKAIEKIDQMINKI >gi|325481687|gb|AEXN01000005.1| GENE 44 39253 - 43764 6524 1503 aa, chain - ## HITS:1 COG:NMB0700 KEGG:ns NR:ns ## COG: NMB0700 COG3468 # Protein_GI_number: 15676598 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Type V secretory pathway, adhesin AidA # Organism: Neisseria meningitidis MC58 # 318 734 969 1387 1815 72 24.0 5e-12 MKSVKSIAGIASLALVINFSGLINEQSNVLKNYSVSYAQSYSERSSKDNYTKFKYKHDRD KLRSINGVKINGVEYRQVREGKDIKEGYYSGKVWGVHKDKYLYIQPKVSTKDKVEFLING SWVLSNKNLETDGSSGATPEEERDSEKYPAILPDEKIAVDNIRSLSYEEEENIISVIKKL NPHYYGVRMSSDGHSVKITYRDGSSNYIEFSQILRQKQDCDRYPFVKPSKTAVEDINYIG RYRSAITQNVKAVNPHVSYLDFSNGKKIKVVYPDKSYILVDIGDLVTVKTDNDNQYEDLK KEIEELKKQIKEKEAVIKRLQSELEGAKKSAQKSKDALEKSKSEAQAANEKANAAQEKAK KAAENLEAAQKDAEEAKRQAEEAKKDASLSKQEKKEAEEKVIEAQTKEKAARLEAEKAKK DAERKIEEAKDQANNLVEAANQAKENAEKAEKLAKESEQAAKDKVKELEKSNQASQAEKE KAQKDLEKAQTDLEQANKEKEKVEKEAKDAKAQAQEAKESLEKAQENIENLKKEKENLTK EKSEIENQLAEAKEAAKKAQAEASEANKKANKAQTSAEEANKKAQQAQEEANKAKTEAEE AKADKTKSEEEKAKAQAKAEEAERKAQEEIAKAKEEAQKSVKEAQTAAETAKEAEVKAKE AQKVAEENLENLKKSSGATEKELAKAKTDLEEANNAKEKAAKEAQEAKASLSKAEENIKK LEKEKADKSQEKEKLQKELAQAKESLNKANAEAEEAKEKANKAQTSAEEANKKAQQAQEE ASAAKDAAQTANEKAKAAQEKAQQAQEEANKAQAEAEEAKKDKTKSEKEKALAQAKAEEA ERKAKEEIAKAKEEAQKSVKEAQAAAQKAQEAEAKAKEAKKLAEENLENLQKSSGATETE LAKAKTDLEEANKAKEKAAKEAQEAKASLSKAEENIKKLEKEKENLTKEKSEIENQLKVA KAAAQKAQSEASEANEKASKAQTAAEEANNKAEKAQEEANKAKAEAEEAKADKTKSEKEK ALAQAKAEEAERKAQEEIAKAKEEAQKSVKEAQAAAQKAQEAEAKAKEAKKLAEENLENL QKSSGATETELAKAKTDLEEANKAKEKAAKAAKEAKASLSKAEENIKKLEQEKKDLQSQL TEAQKAVEKARDEAQKAQDLAEQAKEEASKSQQETQLAKEKVKKAEKALQVAQEETRQAK VEAKKAIEYKTKSEAEKEAAIAKAKLAEQKAKKAQEEARNEIAKAKQEAQRAVQSAKIEA EKAKDAENLAKKAQEKAEERVKELETSNTASKEELTKVKAELGKTKKELAESVKARKEAE EKRAEAEKALEEIKNKNIENPSTETPGTNKPANPSTEASGTSKPEKPSIETPGTDKPADP STETPGTSNPSNPSTETSGTNKPENSSTETSGTNKPADPSTETSGTNKPENPSTETPGTN NPKNPSKKTPGTNKPNNKDKANNTKSLGQIGKNIQTGIESVEGLAGILMTAIGGLFVSKK RKK >gi|325481687|gb|AEXN01000005.1| GENE 45 44711 - 45934 1762 407 aa, chain - ## HITS:1 COG:CAC0463 KEGG:ns NR:ns ## COG: CAC0463 COG0265 # Protein_GI_number: 15893754 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Clostridium acetobutylicum # 14 365 6 338 348 187 37.0 5e-47 MARRNKGSGGFSNFLSGLIGAVLGGFLVFSLLGSSFKAEDNKKDLNNSNEKNKSVININP NDNVTMERAVVKKSIDSVVGITTKTKATQNTIFGPQTGYVEGVGSGSIVTKDGYILTNSH VIGNGDASEINVLFSNNKTKKAKLVWNDPTLDLAVIKVNANNLDPIDLGDSDEVNVGDKA VAIGNPLGLELQSTVTSGIISGLNRTVSFENGAQMDGLMQTDAAINAGNSGGALLNSKGE LIGINTAKAGNSDGIGFAIPVNLAKKVISEISKNGKFNSVYLGITGINLELLLQSNNIDP KTVGSEDGVYVQSVSDDARNYFRKGDIIVGIDGEKVKDMSNLKKLLLNYSIGDKAKVQIV RSGEKKSVDFEFTMDSSKVEEFKEANPRNEKKENRDNSQQLPDWLRP >gi|325481687|gb|AEXN01000005.1| GENE 46 46101 - 47036 1199 311 aa, chain - ## HITS:1 COG:SA1013 KEGG:ns NR:ns ## COG: SA1013 COG0549 # Protein_GI_number: 15926753 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Staphylococcus aureus N315 # 6 311 4 310 310 308 53.0 1e-83 MRKKTIVIALGGNALGNTPLNQVELVKKTAKIIVDLSEKYNVAVGHGNGPQVGMINNAME FAANKGGDTPDMPFAECGAMSQGYIGYHLSQAIRNELKNRNKEKEVAYILTQVLVDKDDP AFKNPTKPIGNFLTKKQAEDKAKENGYLYVEDAKRGYRRVVASPLPKKIIEINVIKSLVE NNNIVITVGGGGIPVIKTGQNLTGISAVIDKDRSSSLLAHDLKADMLLILTTIDKVMINY KKENQKEIDEMTIKEAKKYIDQGEFAPGSMLPKIEACIDFVEKSDEGVALITSLEKASEA LEKKTGIVIRK >gi|325481687|gb|AEXN01000005.1| GENE 47 47051 - 48055 1168 334 aa, chain - ## HITS:1 COG:SPy1544 KEGG:ns NR:ns ## COG: SPy1544 COG0078 # Protein_GI_number: 15675442 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Streptococcus pyogenes M1 GAS # 5 333 5 329 337 368 57.0 1e-101 MPVNLQGRSILGLKYLTEDEIKYLIDLGEEFKKLKMTRSPHKYLEGKNIVLLFEKTSTRT RCSFEVAGMDLGMGVTYLDPNSSQMGHKESIEDTAKVLGRFYDGIEYRGFDQTLVEKLAK YSGVPVWNGLTDEFHPTQMIADMLTIKENFGYLKGLNFVFMGDCRNNVSNSLMVACAKLG INYTGCGPKELWADEKLIEEAKEFAKVHGSKVEFTEDVEKGAKDAHVVYTDIWVSMGEAK EVWEKRIEILHPYQVNQKVMDFADKDAIFLHCLPSFHDLQTSTGKEIYEKFGDKFDLDGM EVKDEVFLGKQSKVFDQAENRMHTIKAIMYATLK >gi|325481687|gb|AEXN01000005.1| GENE 48 48123 - 49352 963 409 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP14-BS69] # 4 408 6 407 409 375 50 1e-103 MAKIQVTSEIKALKKVLVHRPGEELLNLTPSNLESFLFDDIPDLTSCQKEHDRFTKIMED QGVDVVYLEDLMAETLDCNEGLREIFLDQYLKETGCSDKKLLEMSREYFEQIKDDKKFVE KTMAGLTLKELGLFNDKDLYKMEIGKSYLAINPMANLYFTRDPFTSIGNGLVFNKMYSMT RNRETIYCDYIFRYHPAYRENVPIFYGRDNTYHIEGGDVLNGNDHTLLIGISQRTQFEAI KLLAEKLFFGDYENKIEKIYALKIPHNRAFMHLDTVFTQVDIDAFTYHPAIIKKMEVKIL SKDSLKNELKIEKASGNLDQILANALGINKVRLIPCGGGDPIAAEREQWNDGSNTLTLAP GKVLVYKRNTVTNMALRKAGIKVLELDASNLTVGRGGPRCMSMPLERDL >gi|325481687|gb|AEXN01000005.1| GENE 49 49513 - 49653 138 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNLKNNKIQKNLTRKTKKRQLTNNVNKLSFKSWRGIEDSNPRPTGP >gi|325481687|gb|AEXN01000005.1| GENE 50 49824 - 49904 270 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERVKGIGPSQPAWKAGALPLSYTRK >gi|325481687|gb|AEXN01000005.1| GENE 51 49908 - 50018 74 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERKTGFEPATLALARRYSTTEPLPHIFVGRKFMKV Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:21:36 2011 Seq name: gi|325481645|gb|AEXN01000006.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00018, whole genome shotgun sequence Length of sequence - 42007 bp Number of predicted genes - 43, with homology - 41 Number of transcription units - 13, operones - 8 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 56 - 286 306 ## EUBREC_2608 choline kinase 2 1 Op 2 . - CDS 222 - 770 556 ## COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes 3 1 Op 3 . - CDS 763 - 2526 1702 ## COG0510 Predicted choline kinase involved in LPS biosynthesis - Prom 2630 - 2689 9.8 - Term 3153 - 3191 6.3 4 2 Op 1 . - CDS 3213 - 3608 452 ## Apre_0543 SH3 type 3 domain-containing protein 5 2 Op 2 . - CDS 3605 - 4066 305 ## COG4464 Capsular polysaccharide biosynthesis protein 6 2 Op 3 3/0.000 - CDS 4026 - 4397 312 ## COG4464 Capsular polysaccharide biosynthesis protein - Term 4449 - 4499 -1.0 7 2 Op 4 5/0.000 - CDS 4540 - 5052 696 ## COG0489 ATPases involved in chromosome partitioning 8 2 Op 5 . - CDS 5054 - 5746 752 ## COG3944 Capsular polysaccharide biosynthesis protein - Prom 5772 - 5831 9.0 9 3 Op 1 . - CDS 5869 - 6885 856 ## BP951000_0002 glycosyltransferase 10 3 Op 2 . - CDS 6909 - 8420 1235 ## BCE_5386 polysaccharide transport protein, putative 11 3 Op 3 . - CDS 8420 - 9619 225 ## gi|325846189|ref|ZP_08169258.1| O-antigen polymerase 12 3 Op 4 . - CDS 9640 - 10701 898 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 13 3 Op 5 . - CDS 10701 - 11867 970 ## BDI_0436 putative capsule biosynthesis protein 14 3 Op 6 . - CDS 11879 - 12910 939 ## BDI_0434 putative hexapeptide transferase family protein 15 3 Op 7 . - CDS 12926 - 13915 1027 ## COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog 16 3 Op 8 . - CDS 13931 - 15208 1284 ## COG0439 Biotin carboxylase 17 3 Op 9 . - CDS 15227 - 15820 516 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 18 3 Op 10 . - CDS 15829 - 16800 1052 ## COG0439 Biotin carboxylase 19 3 Op 11 . - CDS 16833 - 17027 245 ## Apre_1270 hypothetical protein 20 3 Op 12 7/0.000 - CDS 17044 - 18258 1538 ## COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 21 3 Op 13 1/0.000 - CDS 18258 - 18656 534 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases 22 3 Op 14 . - CDS 18580 - 20220 1182 ## COG1086 Predicted nucleoside-diphosphate sugar epimerases - Prom 20241 - 20300 11.0 23 4 Tu 1 . - CDS 20312 - 21643 1419 ## COG1316 Transcriptional regulator + Prom 21607 - 21666 9.2 24 5 Op 1 . + CDS 21690 - 21797 76 ## + Prom 21902 - 21961 6.5 25 5 Op 2 . + CDS 21981 - 23300 1455 ## COG3579 Aminopeptidase C - Term 23977 - 24037 9.9 26 6 Op 1 7/0.000 - CDS 24040 - 25320 1821 ## COG0001 Glutamate-1-semialdehyde aminotransferase 27 6 Op 2 2/0.000 - CDS 25320 - 26285 1420 ## COG0113 Delta-aminolevulinic acid dehydratase 28 6 Op 3 . - CDS 26266 - 28605 2659 ## COG0007 Uroporphyrinogen-III methylase 29 6 Op 4 . - CDS 28605 - 29198 315 ## VIBHAR_02359 hypothetical protein 30 6 Op 5 1/0.000 - CDS 29195 - 30421 1166 ## COG0373 Glutamyl-tRNA reductase - Prom 30444 - 30503 10.8 - Term 30780 - 30824 6.8 31 7 Op 1 . - CDS 30933 - 31784 1057 ## COG1940 Transcriptional regulator/sugar kinase 32 7 Op 2 . - CDS 31786 - 33204 1262 ## Apre_0187 peptidase S41 33 7 Op 3 . - CDS 33188 - 33394 260 ## gi|325846187|ref|ZP_08169256.1| hypothetical protein HMPREF9246_0816 - Prom 33479 - 33538 7.8 34 8 Op 1 9/0.000 - CDS 33562 - 34572 798 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 35 8 Op 2 20/0.000 - CDS 34569 - 35006 405 ## PROTEIN SUPPORTED gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 36 8 Op 3 12/0.000 - CDS 34999 - 35667 238 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 37 8 Op 4 . - CDS 35681 - 36100 390 ## COG0802 Predicted ATPase or kinase - Prom 36154 - 36213 14.2 38 9 Op 1 . - CDS 36976 - 37083 99 ## - Prom 37107 - 37166 4.9 39 9 Op 2 . - CDS 37178 - 37774 896 ## COG3601 Predicted membrane protein - Prom 37944 - 38003 6.1 - Term 37977 - 38004 -0.8 40 10 Tu 1 . - CDS 38006 - 38671 805 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 38824 - 38883 9.7 + Prom 38789 - 38848 10.4 41 11 Tu 1 . + CDS 38987 - 40990 2137 ## gi|325846177|ref|ZP_08169246.1| hypothetical protein HMPREF9246_0824 + Term 40995 - 41032 4.8 - Term 40983 - 41018 3.1 42 12 Tu 1 . - CDS 41024 - 41701 489 ## gi|325846201|ref|ZP_08169270.1| CAAX amino terminal protease family protein - Prom 41780 - 41839 4.4 43 13 Tu 1 . - CDS 41862 - 42005 84 ## gi|212695945|ref|ZP_03304073.1| hypothetical protein ANHYDRO_00478 Predicted protein(s) >gi|325481645|gb|AEXN01000006.1| GENE 1 56 - 286 306 76 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2608 NR:ns ## KEGG: EUBREC_2608 # Name: not_defined # Def: choline kinase # Organism: E.rectale # Pathway: not_defined # 9 76 170 238 244 93 65.0 2e-18 MSLVGMKKDGEKLKHFIEVEFENNNRQIYWDDVALFCHPDEFDLGIYPMKKEDIVEIDNF SELLAIDPSYKNYPEK >gi|325481645|gb|AEXN01000006.1| GENE 2 222 - 770 556 182 aa, chain - ## HITS:1 COG:FN1237_1 KEGG:ns NR:ns ## COG: FN1237_1 COG4750 # Protein_GI_number: 19704572 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes # Organism: Fusobacterium nucleatum # 7 175 3 170 266 112 39.0 3e-25 MYKVKRAIIMAAGFGNRMKPVTLNTPKPLIKVNGKRMIDTIIDGLHKNGIDEIYLVVGYL SEKFQELLEKYPKLNFIKNPYYDTCNNISSLYVARNFISNAIILDGDQIIYNDEILNPNF EKSGYNSVWTSSYTDEWLQNVKDGKVISCSKTGGKNGWQLYSVSRWNEKRWRKIEAFYRS RI >gi|325481645|gb|AEXN01000006.1| GENE 3 763 - 2526 1702 587 aa, chain - ## HITS:1 COG:TP0107_2 KEGG:ns NR:ns ## COG: TP0107_2 COG0510 # Protein_GI_number: 15639101 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted choline kinase involved in LPS biosynthesis # Organism: Treponema pallidum # 318 580 1 263 274 228 41.0 4e-59 MNKNKMNILLFLSNNKFVSQRDLMERTGYSLGFVNKAINSLKNDKFLDDDFNISHKGQSL IDKNKPKRAIILAAGFGLRMVPINLDSPKALLEIKGEVLVERIIRQLHSVGISEIYIVVG FLKERFEYLIDEFGVSLIVNESYDLKNNLYSLDLISDKLDNAYIIPSDIWCRENPFRKNE LYSWYMISDKKSTYSKIRINRKNELVTIKDEDKGNSMVGISYFTKDIADKLRGNIDKLKK DNESYQMFWEEALFNFSNINIAARLVKSSDFVEIDTYEDLRELDRESSNLKSDVIDLICK VFDVHKSDIKNISVLKKGMTNRSFLFSCKNKKYIMRVPGEGTDKLINRYEEAKVYKLLKG KNICDNIIYMDPENGYKITEFIENSRVCDPENMDDVSKCMEKLKEFHNLSLSIDHDFDIF DEINFYESLWNGKKSVYRDYQKVKNGVFSLKSFIEKNIGKKSLCHIDSVADNFLFTEDKS VKLIDWEYAGMQDPHVDIAMFCIYSMYDKEKIDQIIDIYFDNKCDFNTRLKIYAYISSCG LLWSNWCEYKRNLGVDFGEYSIKQYRYAKEYYRIVRKYIKEEEKMDV >gi|325481645|gb|AEXN01000006.1| GENE 4 3213 - 3608 452 131 aa, chain - ## HITS:1 COG:no KEGG:Apre_0543 NR:ns ## KEGG: Apre_0543 # Name: not_defined # Def: SH3 type 3 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 131 1 151 153 73 32.0 2e-12 MKIKYILCSFALLLALSSCDKKQEKYEKRDVQIDTVFDSSSNNISNEVEEKEASNVEENA KSNTESKDLRTKSTINLRRSPSTNEDNIIASIPGNSQVKLLSEEEDENGEMWSRIFYEGQ EGYVKSDLLEK >gi|325481645|gb|AEXN01000006.1| GENE 5 3605 - 4066 305 153 aa, chain - ## HITS:1 COG:SA0146 KEGG:ns NR:ns ## COG: SA0146 COG4464 # Protein_GI_number: 15925855 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Staphylococcus aureus N315 # 7 124 117 238 254 64 33.0 6e-11 MSTSHFFLTDLIYNLSLEGYVPIIAHAERYPYVEKNISYLYEFINMGALIQINYSSMKSH HHTTKKLLEKNMVHFIGTDSHQSEWRSPNIEDEKNEIIEIIGQEKFEKLTQINPKKVIDD GFIPSGYDEIIREEEKVEKKSKKRSLFNFWRKK >gi|325481645|gb|AEXN01000006.1| GENE 6 4026 - 4397 312 123 aa, chain - ## HITS:1 COG:SP0347 KEGG:ns NR:ns ## COG: SP0347 COG4464 # Protein_GI_number: 15900276 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 1 115 1 114 243 77 39.0 7e-15 MIDIHNHIIYEVDDGSRSFDESMKMVELFMKSGFKEIIATSHYDPSRYMVKKEDILEKSS ILNDEIKKRNLDFKIYPGHEIHVEPNTLDKIHKKELLTLNNSRYVLLELSFVNKPLFFDR FDL >gi|325481645|gb|AEXN01000006.1| GENE 7 4540 - 5052 696 170 aa, chain - ## HITS:1 COG:CAC3043 KEGG:ns NR:ns ## COG: CAC3043 COG0489 # Protein_GI_number: 15896294 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Clostridium acetobutylicum # 16 170 14 166 224 133 46.0 1e-31 MAKKHGYYNTTSIFDEAIRSVRTNIQFSDIDNKKRVIAMTSSKPSEGKTTVLYSIAKSFA ENGNSVVLLDFDLRMPKVGKVAGIETNMGLTNVITGKVELDRALIKDQYEDNLFVLLSGP VPPNPAEILASNHVKELIEELSKRFDYVFLDTPPVGLFTDASIVSTYCDG >gi|325481645|gb|AEXN01000006.1| GENE 8 5054 - 5746 752 230 aa, chain - ## HITS:1 COG:SP0348 KEGG:ns NR:ns ## COG: SP0348 COG3944 # Protein_GI_number: 15900277 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Capsular polysaccharide biosynthesis protein # Organism: Streptococcus pneumoniae TIGR4 # 5 228 8 228 230 130 37.0 2e-30 MDEREIDLLELAKKLRQHLFSILCLAVIFAALSYAASVFVITPKYEATTTMIVSNSKNED PNQKGDVDINQINANRALVSTYSEIVKSKGVADKVIADLKLDMDYGEFSQKVSIEPVKDT QIISVKVVDTVPERAMDIANSTSMVFKDSITKIMKVDNVQILDKANLPEKPSSPNIKKNT LVGFVLGFILGVGISLFRELSDTTFKTTDDIQEAFDIPVLGMIPDKSKGE >gi|325481645|gb|AEXN01000006.1| GENE 9 5869 - 6885 856 338 aa, chain - ## HITS:1 COG:no KEGG:BP951000_0002 NR:ns ## KEGG: BP951000_0002 # Name: not_defined # Def: glycosyltransferase # Organism: B.pilosicoli # Pathway: not_defined # 44 324 3 285 427 184 42.0 5e-45 MSKFKYYIKRFGIIGILKQMLNKLGLIKFNVYEFLYKKYYSKLKKENYENELIEWYQYRS QSEKNPLENPKTFNEKIQWLKLNDSTHLKTVCADKYLVRDYVKDKVGEEYLIPLLGYWDK FEDIDFSKLPKKMIFKSTTGSARYKIIKDKNNIDYKDLKKSMDLWQKLPYGYVGMEIHYF DIDRKIICEKLLDMKGPSVIDYKIHCFNGKPLIVEYISDRRGHSYCETWFDTSWNKLNIF MDSDSSFNHKITPTPPQKLKEMLKISKILSEDFIYVRVDLYEIEGTIYFGELTFTPANGF DIWKGTKSQLLVGNLLRLPFESRLNDEEISKIMLELKL >gi|325481645|gb|AEXN01000006.1| GENE 10 6909 - 8420 1235 503 aa, chain - ## HITS:1 COG:no KEGG:BCE_5386 NR:ns ## KEGG: BCE_5386 # Name: not_defined # Def: polysaccharide transport protein, putative # Organism: B.cereus_ATCC10987 # Pathway: not_defined # 1 501 3 503 508 360 42.0 1e-97 MRSKKAFLNILTNLILQVFIFVYGFILPKIIMSKYGSNVNGLISSVTQFLAYISLLESGV GPVVKSILYKPISKKDNKKIIDILYATEKFFRTIALIFIVYIIILTFAYPNIINSSKSTL YVSSLIIIISISIFSEYFFGMIYTIFLQANQETYVISIIQIGTYILSILAALIMAKIEVS VHLLKLSISLIFVLRPILQSVYVKKKYNINLKIANKNYVIKNKWDGLAQHIAYVVHSNTD VTVLTLFSTLSEVSVYSVYLLVVKGVKALISAFSSGLDASFGDMISKKEDDNLRNKFEIY EIIYFMICTVLFACSIVLIVPFIKIYTHNIHDANYIRPLFGVLLVISECIWAVRLPYLTL SYAAGHFKETRNGAWLECILNLIISVFLVKKMGIVGVTIGTIIAMTIRTTEFIYHANSKI LNVNIFKSLKKIALLIFIIFLTFISAKKIFIFENSSYLNWIINAMIIFLYSSLLTFLFNF MFYRKNLRELIRIAKFILKKKSI >gi|325481645|gb|AEXN01000006.1| GENE 11 8420 - 9619 225 399 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846189|ref|ZP_08169258.1| ## NR: gi|325846189|ref|ZP_08169258.1| O-antigen polymerase [Anaerococcus hydrogenalis ACS-025-V-Sch4] O-antigen polymerase [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 399 1 399 399 587 100.0 1e-166 MNKRIGIINIDRAKFYLLYLFMFLIFLIPPACEKLMSSSIYRFIKITSYFFILIYIIFNF KKINHSLLLMLGFNFILVLSTFLNNGEITESIKHAVTILIICLILVDVIDNNIKRISFIY VTRDLTLFFFIINLLMIILYPTGIPSITYDPQFPNYLYGNVNSTIKHILPGMCCSSLLDF RKNKKVSLYTLIFIFGIFYQALFIYFTATAVLNCLFILFWIHIFCFSNKYNIRKVYLISI TLIFLIEIMLVSRLKVVSLISNIFGKDFTFSGRIYLWNNVINLITKKLFVGYGVIDESLE VYLIGNFYGSHNYFLDVLFQRGIIGLIFLITIMIYPLLVNFEFEKQKYINLLFGYSISCF ILFLTEPIYNKEYLILPIIFSLIYSIEKSKNINLKSRIE >gi|325481645|gb|AEXN01000006.1| GENE 12 9640 - 10701 898 353 aa, chain - ## HITS:1 COG:BS_yveR KEGG:ns NR:ns ## COG: BS_yveR COG0463 # Protein_GI_number: 16080483 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 4 227 6 218 344 118 31.0 2e-26 MIDISIVVAAYNVEKYINECIKSLLNQSCDNYEIIIVDDGSTDSTAKIIDSFSGNENIKI IHKKNEGVSVARNVGIENSEGKWLTFVDGDDFVDSNFIINVRKIINNIECDMIVFNYNGY FNDDNKFECRTLPFDKNQFITKYKDLFQKRMISQYYEGGDSRTIVSSGTTWCKVIKNDIV KSCNIRYKPGLIKAQDTVFWLNATEKVNEIYYFNKSLYNYRLSFSSISSGKKFIKESEKE FDKLIKEYRTFVKNKDYSFIEALNLRYIQVIMWNIDHNFFNINNNIKIRNRTNLLKDISY KKDYRKAINNANGKDLPIRIRLMLYFIKNNKFLEYYFVYKIYNFLSLIKNKRK >gi|325481645|gb|AEXN01000006.1| GENE 13 10701 - 11867 970 388 aa, chain - ## HITS:1 COG:no KEGG:BDI_0436 NR:ns ## KEGG: BDI_0436 # Name: not_defined # Def: putative capsule biosynthesis protein # Organism: P.distasonis # Pathway: not_defined # 2 382 6 405 415 255 40.0 3e-66 MRISFTGDIMCELPTLRKAKSKNKYDFKGILSDSEIFEKTDYIVGNLETVLAGEKAKFSK DIYSYNTPDTFADEVFKAGFNLVSTANNHCLDRGKDGLIRTMETLKDKGIEYVGTNLNSC DKRYKIVDFGNLKIGFLSYTYGSNYSINKNKLDNDDIFLVNFFENQEWIDTSRKDLYSKL KDNLISAETRVKILKLLRRDFNRPRIDNNSLQQLNPNLAIDIQELKRETDFIILLMHSGG QFNKEPGVYTKELVKELDKLGVDMVIGNHPHVVQKTEYNSDFFVAYSLGNFFISPDTIYL INDNLPLYSIVLHMDIINNKNYKMSFSISKIIKKGKIEKVVDTFELYKEEGINKNKLVND CKQIYETFTRKQDKDFSIRKEYELYMEK >gi|325481645|gb|AEXN01000006.1| GENE 14 11879 - 12910 939 343 aa, chain - ## HITS:1 COG:no KEGG:BDI_0434 NR:ns ## KEGG: BDI_0434 # Name: not_defined # Def: putative hexapeptide transferase family protein # Organism: P.distasonis # Pathway: not_defined # 43 340 27 325 333 215 40.0 3e-54 MDSKEKIRLTGYNNEKGIKAYIVNHINKYKLLKDMFIGKTSKLESVKIFFDFWISVIVLG AGINDYFQYNFYKKNYSERNKFIVGRKWKKILLKCNGSTKIDIFDDKLKFNNKFNEFLKR DWLDVDKSNYDKVSEFILNHDSFFLKQNVGSGGNGISKHISKEIKNHKEFYNKIKGKSFI LEEAIIQDKSLAEFNPSSVNTIRVVTIRDKDVVHIMDAILRMGNGEKSTDNFHQHGLAMK MDVDSGEVVSLAIDKSNNKYEYHPVTNKKLLGYKVPHWDKVKDTVIKASKVSKDVRYVGW DIAILENGEVSIIEGNCSSDPDITQMPKQVGRWEDYKKVIEKL >gi|325481645|gb|AEXN01000006.1| GENE 15 12926 - 13915 1027 329 aa, chain - ## HITS:1 COG:MA3252 KEGG:ns NR:ns ## COG: MA3252 COG2423 # Protein_GI_number: 20092068 # Func_class: E Amino acid transport and metabolism # Function: Predicted ornithine cyclodeaminase, mu-crystallin homolog # Organism: Methanosarcina acetivorans str.C2A # 7 324 6 318 326 155 29.0 9e-38 MTKVKVISEKQVIKIMQNHWTDGINQIKKSFIHRGKNRVILPEKSSQIFDPISQNRINCM PSTLLDENICGIKWVSVFPTNANKNIENVNGITLLSEIETGQPIAIVNSTWLTKFRTAGV AALASEYLAKKDSKSIGFIGAGEEAKMHLEVFKHMHPSIKECRVSSRTHKSCVKFVESLS KKYEDINFTICDNNFEKSIRGSDIVVTAISGQEAVLKADWLDKANFYVHVGGFEDEYDVA LKADKIVCDEWDAVKHRGSQTISKMYQDGLLNDENIYAELSEIILENKVGRDEKDRFIYF NSVGMAYEDVLLAKFVYDKSEEVGNILEI >gi|325481645|gb|AEXN01000006.1| GENE 16 13931 - 15208 1284 425 aa, chain - ## HITS:1 COG:TP0695 KEGG:ns NR:ns ## COG: TP0695 COG0439 # Protein_GI_number: 15639682 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Treponema pallidum # 7 269 2 273 597 65 25.0 2e-10 MNNLNGKKILFLGASTYFYEAAKYAKDQGAYIIAIDRRPKEECVVKQIADKEYLMDTTDI ETIKELILKEKIDGIYPGASEVNIPISIKLAEDTGIPKYCEENQWEMATNKAIFKDVCRK YDLPVSPVFDIAEPIDENQISKLTFPLVTKPVDNNGSTGITICEKPDDFINAYNKAKSAS KTGNVLVEKKMNFEHSLIAHYTAQEGEVIFCGLTDKESKKINKDSAPVMSIQFMPSKLTE DFKANINDKIINMLEGIGIKYGPIWIEVFYDENNFYLNEIGYRYGGSLTYYPVDYLFGIN QMHLLINYLATSKPLYKNFKDIKEIKERKNHKYCILPIQLKHGTIKSIEGLEDLIDKKFV YAFIQSHIVNDVIEKTGTTHQVFGYIHLVADGQEQLEEYIKYVNGSLKVLDENCENMVDI LYCRK >gi|325481645|gb|AEXN01000006.1| GENE 17 15227 - 15820 516 197 aa, chain - ## HITS:1 COG:CAC3073 KEGG:ns NR:ns ## COG: CAC3073 COG2148 # Protein_GI_number: 15896324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 7 193 28 220 222 136 39.0 3e-32 MIYKKYIKRLIDLILAIIALPFVLIICLIFGILIYLEDRGDVFYIAKRRGINGSIFGMYK LRSMKMNAPDIRNKDNSTFNSSNDPRVTNIGKILRKTSIDELPQVFNILKGDMSWIGPRP NNPSKVYEDMTNVEKKRLSIRPGVTGYSQAYYRNSISQAEKLEKDVYYAENLNFIFDVKI IIQTVKSVLLQKNINTN >gi|325481645|gb|AEXN01000006.1| GENE 18 15829 - 16800 1052 323 aa, chain - ## HITS:1 COG:mll6062 KEGG:ns NR:ns ## COG: mll6062 COG0439 # Protein_GI_number: 13475061 # Func_class: I Lipid transport and metabolism # Function: Biotin carboxylase # Organism: Mesorhizobium loti # 3 317 88 397 409 106 27.0 6e-23 MTTVAKVAKELDLIGIDEKTAINATNKSKMRDALKAYGVPIPMYFSVEDYDQYIKAIDNL RNKKYKCIVKPADNSGSRGIRLVENYDIDQLKKIYDYCKKNSNSGKLVVEEYMQGSEVSV ETISRNGACNVIQITDKLTTGAPYFVEMGHNQPSQFPIDIIEKIKKVAIDANKAVGIENG PSHTEIKVTKDGPKIVELGARLGGDNITTHLVPYSTGINMVEASIKMALGEEIDITKKID MASAARYKKCDIGKIVEISGIDEAREVSGIKDIKIVHKAGDYSNVIKSSNDRVCYVISQE DSVEKAIESCEKALEKIKVKVQK >gi|325481645|gb|AEXN01000006.1| GENE 19 16833 - 17027 245 64 aa, chain - ## HITS:1 COG:no KEGG:Apre_1270 NR:ns ## KEGG: Apre_1270 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 64 1 64 399 106 93.0 4e-22 MKKLMILGASVLQMPAIVEAKKLGLYVIAVDMNPNAEGFSYADKKIVVSTTDTEKVLEEA KKIK >gi|325481645|gb|AEXN01000006.1| GENE 20 17044 - 18258 1538 404 aa, chain - ## HITS:1 COG:SP1837 KEGG:ns NR:ns ## COG: SP1837 COG0399 # Protein_GI_number: 15901666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 6 402 5 401 408 526 62.0 1e-149 MTKKMNIPFSPPDISDEEINEVIDALKSGWITTGPKTKKLEEELLQFTGTNKGVCLNSQT AAAEMTLRVLGIGKGDEVITSAYTYTATASVVDHVGAKLVLVDTQKDTLEMDYEKLKEAI TEKTKVIIPIDLGGVPCDYDKIFEIVEEKKSLFKANNEIQKAFDRIIVMADAAHALGAEY KGKKVGSVADFSNFSFHAVKNFTTAEGGYATWKDIEGIDNEKLYKKYQLLSLHGQSKDAL SKTKLGSWEYDVIGPWFKCNMTDVLAGIGLAQVKRYPSLLKRRKEIIEKYDKAFIPLGIK SLNHFDQNHKSSGHLYITQVPEIDTEERNKIIEEMAREGVACNVHYKPLPLLTAYKNLGF DIKDYPNAYNHYKNEITLPLHTKLSDEEIDYIIEKYCEIVKKYK >gi|325481645|gb|AEXN01000006.1| GENE 21 18258 - 18656 534 132 aa, chain - ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 1 111 473 589 608 103 50.0 6e-23 MTIKEAVKLVLQAGSMASGGEIFVLDMGEPVKIDYLARQLIKLSGYKPDIDMPIIYTGLR PGEKLYEERLMDEELLSDTQIKGISVGRPLEFSRKEFFQKLDKVINQENIDELDIIETIN ILISTFIGKGNK >gi|325481645|gb|AEXN01000006.1| GENE 22 18580 - 20220 1182 546 aa, chain - ## HITS:1 COG:BH3718 KEGG:ns NR:ns ## COG: BH3718 COG1086 # Protein_GI_number: 15616280 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Predicted nucleoside-diphosphate sugar epimerases # Organism: Bacillus halodurans # 7 447 3 431 608 272 35.0 1e-72 MNLKKIFNKKALILLVFDIIIINLAYFLALFLRFDMQFNQIPLEYLNGFRNYAIFNTIIT IAIYIFFKLYRMILEYASYNELIKITQAVILSVFIHVIGISLFFIRMPISYFIIGFLIQY MFTVALRFAKKILIQNRYNAIEKNPEFKRAIIVGAGSAGQTIKEDINKSNRQENIGIKVV AFIDDNPGKKGQYIDDTIIYGDRNSIKELVDKENIDLILVALPSAQEDQKREILQICNET NCEVKVLPGIYQLVSGSVSMSGMKDVQIEDLLGRDPVKIFSNETFEYLNDKVVLVTGGGG SIGSELCRQIAQYGPKLLIIFDIYENNAYEIEQELKRNNKDLKFITLIGSVRDYARVKKV FETYKPDIIFHAAAHKHVPLMEVSPVEAIKNNVRGTYIVALLSLIYNAKRFVLISTDKAV NPTSIMGATKRVCEKIIQGINDIKDKKEFEKLAKIDIQDGDRNIEINPQELLQGKKSTNR ICCSKIWKRTWIKWFCNSIIQRTNCIWWTCNSNPPRNNPLFHDHKRSCKISFASWIYGKW GRNICP >gi|325481645|gb|AEXN01000006.1| GENE 23 20312 - 21643 1419 443 aa, chain - ## HITS:1 COG:SP0346 KEGG:ns NR:ns ## COG: SP0346 COG1316 # Protein_GI_number: 15900275 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 61 436 102 474 481 283 43.0 5e-76 MRFIILGLILLAIIGFTFLIFKKKNANKAVKAIFIVGLVLISICEGLFMSYANKSITTVE KINQKNDLNKTQMSFVALKDSNINSINDIKETQVAIARQMDEKNIDQTLEKYKKENEEIN AKDFGDYLKAGEALINQNAQVMLLNESFRQMLDESIEGFSDKTKVLKSYSVKGNEKLKEN NKVEKDQSFNVYISGIDTYGALSNVSRSDVNLIVSVNPKKGKILITTIPRDTYVNLAGLG KNANDKLTHAGLFGVDTSIKTLENFLDVDIDYYAKVNFTTLTKLIDLLGGVEVENPVAFN SVGGYYFPQGSVQMNGEMALAYSRERYNLAEGDFDRGKNQVRVMTGIIKKLLSTETLMNF NSIADVALESVNTNLPYDKMIEMVNGQLEENKKWHIKSQALKGYGAQGLPSYLMPSSQLY MMQADDESIEDVHKNILNNNRNK >gi|325481645|gb|AEXN01000006.1| GENE 24 21690 - 21797 76 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYIIEDKNIEILDIRFFVMILKNSPFIHNLYLILR >gi|325481645|gb|AEXN01000006.1| GENE 25 21981 - 23300 1455 439 aa, chain + ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 1 431 1 438 450 295 34.0 1e-79 MNLDKKIFDQLEKIYDKDQKNKVIENAISNMGIREASLDRNIINQHDFIFSNEVETKDVT NQKKTGRCWMFAGLNMVRMHIAKKLNMEKFELSESFLYFYDNMEKANLFLQRVIDTKNFD IKDRKVEDVFYSTPEDGGYFEFFYYLIKKYGIVPKNAMGELYHTDQSQFMFYVLENALKK IAMEIRATDDEKKIENLRKEGLSYAYNIFAKSIGKPVESFDFKYYDKDDKYHIEENMTPK AFFDKYVGDFFDGKVKLLNDPRHPYNRILVDKVAKNAVDLDDLVGINVDMDTMSKFAQKS IKNNETMWFACDVDINEDRESGVLDENLFNFDQTFANFPKMTKEERIHSRYSTACHAMNL TGFYKKGKEVKFWKIENSWGEDDGKDGYFSMTDEWFRENTFELIIDKKFLTKKVMEAFDK EKIYYDEFDPMYKMLRNVR >gi|325481645|gb|AEXN01000006.1| GENE 26 24040 - 25320 1821 426 aa, chain - ## HITS:1 COG:PA3977 KEGG:ns NR:ns ## COG: PA3977 COG0001 # Protein_GI_number: 15599172 # Func_class: H Coenzyme transport and metabolism # Function: Glutamate-1-semialdehyde aminotransferase # Organism: Pseudomonas aeruginosa # 2 423 6 427 427 418 47.0 1e-116 MSLFDQAKKYIPGGVNSPVRAFGAVGGNPLFAKYGKGSTIVDENDDAYIDFISSWGPMIL GHGKKELIEKAKGYLEEGLTFGLPTKVEIEMAKFLAEAFDTDMIRMVNSGTEATMSAIRC ARGFTKKDKIIKFEGCYHGHSDGLLVKSGSGALTFNVATSAGVPKEVIKDTLVCKYNDIE SVKKTLAENEGQVAAVILEPIAGNMGVVPIDLEFVKELRKITQEKNIVLIFDEVITAFRL KFGSISTEFGVKPDMFCFGKIVGGGMPVGGFGGRREIMEVLSPIGPVYQAGTLSGSPFIM KMGLDVLTILKENPDIYQRLEKYAKMLEEGFKDNLKQTGVDGFVTRYKSMMSIFFGEFDQ IRSYDDVQKADLEAYSKYFNYMKEKKILLPPAQFEAMFMSDALDEDIINYTIEQNKKALE YIKKTK >gi|325481645|gb|AEXN01000006.1| GENE 27 25320 - 26285 1420 321 aa, chain - ## HITS:1 COG:CAC0100 KEGG:ns NR:ns ## COG: CAC0100 COG0113 # Protein_GI_number: 15893396 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Clostridium acetobutylicum # 2 318 4 320 320 409 65.0 1e-114 MRMRRIRENKVLRQMTKETSLEISDFIYPLFVVEGEGIKKEIPSMPDCYHFSLDKLEDEI NEIVDLGIKAVILFGIPNKKDDHGSEAYAEDGIIQKAVRKIKEINKDLLVITDVCMCEYT DHGHCGILDHEGHVLNDETVSYIAKIALSHAKAGADIIAPSDMMDFRIKAIRKILDENNF KNIPIMAYSAKYASNFYGPFRDAADSAPSFGDRKSYQMDYHNSNEAMREIDLDLEEDADF IIVKPALSFLDIIQRTKDNFNTNIVAYNVSGEYSMVKNAIKMGLVNEEIIYEILISIKRA GAKLIITYHAKEMAKKLRGEK >gi|325481645|gb|AEXN01000006.1| GENE 28 26266 - 28605 2659 779 aa, chain - ## HITS:1 COG:lin1164_1 KEGG:ns NR:ns ## COG: lin1164_1 COG0007 # Protein_GI_number: 16800233 # Func_class: H Coenzyme transport and metabolism # Function: Uroporphyrinogen-III methylase # Organism: Listeria innocua # 295 534 3 244 252 195 42.0 3e-49 MIKIGSRASKLALIQANMVKDILEKEGLEAQIVEISTKGDRIRDRKIDQLNSKGVFVREI EEKLLDKTIDLAVHSLKDMPSQIDDRLIFTPPLKGEDPRDCFVGKDIFKKMDDLNNALVG TGSNRRVCQGKNYFTNIKFKAIRGNVETRIKKVQSENLDGVILAKSGLIRAGLDGEINFD LDPHIFTPSPCQGILGIEIRKEDKKLFEIFKKNSDEKTLFRMETERAFQKELGADCSTPM GIFTEIDHDKITLTGSMAFDKDDRINYEKVSGNISDRINLAQKLARTLKKKSYKKIILAG AGIGSKNNITLAVKKALDEADVIIYDRLLNQEILDPYRNKDLYYVGKSMGDHVLSQDDIN KLMVDKAKTGKKVVRLKGGDPYVFGRGSEEALFIKENGLEFETLPGLTSGIVCLNTAGIP ASHRNMATSISFITGHRSENQNEDFKKYAKLPGTLVFYMGLKNLPNIIKDLIDGGIKKDK KIAIISNGSSPKQKVYSSNVEKVLEEIDLEKIKRPAIIVVSDTVGLREYLNYFESKNFGK KIALTRDYESTIKDKEKLEGLGFDVKIVPTIKILEKNTDLLEEKFKDFSYDYLVFTSKNA VKIFFDKLIENHDIRDIGKVKIAAIGEKTKKEIEKYNLKVDIVPRNFVGENLLDQMEKYV KKGEKIFFPHSNLSRKKIIEGLGKMGDLDEIEIYDNIRAEKEDIDLDFDGVIFTSSSCVN NFVEIYGKDPLKNTKIYSIGQITSQTIKNHGLEVYKESKKQSVDSLIERIVEDYENEKN >gi|325481645|gb|AEXN01000006.1| GENE 29 28605 - 29198 315 197 aa, chain - ## HITS:1 COG:no KEGG:VIBHAR_02359 NR:ns ## KEGG: VIBHAR_02359 # Name: not_defined # Def: hypothetical protein # Organism: V.harveyi # Pathway: Porphyrin and chlorophyll metabolism [PATH:vha00860]; Metabolic pathways [PATH:vha01100]; Biosynthesis of secondary metabolites [PATH:vha01110] # 1 185 1 178 306 65 28.0 1e-09 MRYFPISIDSKDKICLFLGGGKIAKRKIKSLLKGDFSFLIYAKEIDKEVMELCKENPQRI KIVEKDIDEDFVFPPCDFLFLATGNRNLNKILRKKAKNLGLRTLDLSDSLGSDFYLRKNI SNEFVDISISSNGQVPIFSSLIGDDLEKYLESLDMDKIKLMVEIRDKLRKNGIYNKALLL DLYKEDKQFLKKYLEKI >gi|325481645|gb|AEXN01000006.1| GENE 30 29195 - 30421 1166 408 aa, chain - ## HITS:1 COG:BS_hemA KEGG:ns NR:ns ## COG: BS_hemA COG0373 # Protein_GI_number: 16079869 # Func_class: H Coenzyme transport and metabolism # Function: Glutamyl-tRNA reductase # Organism: Bacillus subtilis # 1 406 1 417 455 194 29.0 2e-49 MFFYSFGLNHHKAGIDIREKVHFKDSDIIDASEILENEGFDEVVILSTCNRSEIFALTSE DKFSDDFFVKFFENYFSLDGLSSFIFVKKDLDAINHLFSLTCGLDSLIVGEDQILGQVSD AYETSLSLGFCKKILSEALKMAINLSKNIKSDSNISHIPLSLPYIAVKKAQEFDDLSNKK ALVVGIGNIGKLCIENLMETGSDIYISNWNMDKSIKIQKEYENINIISYEKIQENLGDMD FVFSATASPHLVLKKEHFKNINKKINIFDLALPRDCDPEISKISNVNLLDIDSIKDISRK NLDKRRKILQSYRADIDKKSKEFYKWMKEVKIDYILKDLNDRCDDLADKTMDYIFRKTDM TGSQKKKVDKAVRNALKKIARDPVLTFKENHGEDFEKTLKILTKVYKK >gi|325481645|gb|AEXN01000006.1| GENE 31 30933 - 31784 1057 283 aa, chain - ## HITS:1 COG:CAC1523 KEGG:ns NR:ns ## COG: CAC1523 COG1940 # Protein_GI_number: 15894801 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 1 280 2 281 288 254 44.0 1e-67 MYGSIEFGGTKIKCASFDENGKVIDDCWIYTGKTEENLEEIGEFYKKNPVEALGVGAFGP IDLNEESKTYGYIQNTPKKLWVNYDLLGNLKKQVCQKIKIVTDVGLSLIGEANKGAGEKL NSSLYLTIGTGIGGAYIQNGKLLNGFSHPEMGHINIKRMKDDDFKSICTYHEDCLEGLAC GPSVNKRLGQNPKDADINEKAFKIAANYIAQAIYTYTLVLRPEIVIIGGGLINKEGFIEM IREEFDKIKGDYIPVKESCEYIVKPKLKNDSALIGGYLLAKSL >gi|325481645|gb|AEXN01000006.1| GENE 32 31786 - 33204 1262 472 aa, chain - ## HITS:1 COG:no KEGG:Apre_0187 NR:ns ## KEGG: Apre_0187 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 1 467 1 461 466 387 45.0 1e-106 MKKKNKLSLLALVFLILFSSCAQRRIDYLNQRKDIILSEKKPKEKKIVKFNPDQIDEFKS TDDYLTWYKSLDGPCQLVFKDKKDQKELSQEERVEDFNYLFNQIRDNYPFFGILKRQYGI DFLGNYSRYLNEVKFCKSDQEFQKIMQNIMADLHNDHATIADEEYVKETLEYYSHFWKDP SMYYEFLTMNKESVRDRYNIKGVQSSQIEKEKSKKKSGHKKTSLETLTEDNGENLQTKII KPGLGLVRVNEMLAEYELSDDMNKLDEFLKNNPNLKALIIDIRQNSGGNIEYWQNYLLPR LIEKKVSVENHMFFRDGMRTKMLLQSEDISYENIENVNLANMDLNHKEDLENFSYYSKDE IEISPLKENKFKGNLYLLVDEGVYSAAEGLANFCKNTKIAKLVGHKTGGDGITLGVINDV LPNSGLVFTYTNTLGYAPDGSINEEEKTNVDIVTESLNESIDTIKKLEKIGE >gi|325481645|gb|AEXN01000006.1| GENE 33 33188 - 33394 260 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846187|ref|ZP_08169256.1| ## NR: gi|325846187|ref|ZP_08169256.1| hypothetical protein HMPREF9246_0816 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0816 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 68 1 68 68 118 100.0 2e-25 MFLRGLFLIKINNKSMGSIMRNEKRGLSFYLLMIALFSLINPVGILPFLYEIRKRDWVIS GGLDEEKK >gi|325481645|gb|AEXN01000006.1| GENE 34 33562 - 34572 798 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 7 324 520 844 860 311 46 6e-91 MKDFYTMGIETSCDDSSVSILKNDREVLVNLISSQIDIHKMFGGVVPEIASRKHLEAINP LIEKALNDCNLKYQDIDLISVTKGPGLIGSLLVGISAAKALSLAADIPMIGTNHMQGHIC ANYLSNKDLEPPFISLVVSGGHTYLVKVNGYTDYEIIGTTRDDAAGESYDKIARSIGLGY PGGPKIDKLAKEGNKDAIDFPRIMLEKDSYDFSFSGLKTSVLNYINKQNQKNIEINKADL AASFQEAVVDVLVEKSMRLIDESGLKILAVSGGVAANSRLKERLKEECDKRGVKFYNPDI ILCTDNAAMIAMAGYLNYKDGKRSDNYLKVYPNLGL >gi|325481645|gb|AEXN01000006.1| GENE 35 34569 - 35006 405 145 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Anaerococcus prevotii DSM 20548] # 1 144 1 144 146 160 54 1e-38 MIRTMTVADTDKVYRIETSSFFRPMPKKDLVSDIEKNKHKRHFVYDKNGETVGFYIISKI LDEVEIYTIAVDELYRGQKIASNMLEHLINFSREMKVSKIWLEVSTKNMPAINLYEKFGF EKIRLRKNYYSLTNEDAYIMLKELI >gi|325481645|gb|AEXN01000006.1| GENE 36 34999 - 35667 238 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 42 220 1 186 380 96 36 3e-19 MRVLAIDTSTMISTVSICEDEKIIGDFNVNQEKTHSESLVPMVESLLKLLGLKLSDIDIF AISQGPGSFTGLRIGMTIAKTFAQVDNKKLIPISTLKALALNSSSNTAKAAMLDARGKRV YGAMYDENMNEIVKEDLYNIDEFSKLCNEQNIDFDLVSEVSEKYEDKFDRARILDFSYRS CIGKNLCKLALEKKDEDFDLYKLVPNYLRKSQAERDREKKND >gi|325481645|gb|AEXN01000006.1| GENE 37 35681 - 36100 390 139 aa, chain - ## HITS:1 COG:SA1857 KEGG:ns NR:ns ## COG: SA1857 COG0802 # Protein_GI_number: 15927627 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Staphylococcus aureus N315 # 1 137 2 132 153 102 42.0 2e-22 MRINSLKEMEDFAFDFSKKLKKGQVINLIGDMGSGKTTFVSYICKYFGISNTSSPTFAIV NIYDGKKQGEDFPIYHLDLYRFEDPDEILDIDFETYFYPENAITFLEWADKAEDYLPDDM IEVNIEKIDENTRDISVKF >gi|325481645|gb|AEXN01000006.1| GENE 38 36976 - 37083 99 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHSTSLILKHVCYANFPVLSHLVLGIIVPNQGTII >gi|325481645|gb|AEXN01000006.1| GENE 39 37178 - 37774 896 198 aa, chain - ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 7 195 5 193 209 160 42.0 1e-39 MSHDQKKLRNLVKVGILSAMSFILMFVQFPIPVAPPFMKVDLADVPALIGGFSMGPVYGV LIQLIKNVLNLTKTSTGGVGEISNFIVGGLFVFISASIYKKNKTKKNATIAMVCGVLVMT LAATFSNAFVIFPLYGKAMGVDMSAFVAMAHKTNALVNSYFTMMLFAIVPFNLIKGFIEI LVTKLLYKHVSSILHDRK >gi|325481645|gb|AEXN01000006.1| GENE 40 38006 - 38671 805 221 aa, chain - ## HITS:1 COG:aq_319 KEGG:ns NR:ns ## COG: aq_319 COG0745 # Protein_GI_number: 15605840 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Aquifex aeolicus # 41 212 51 226 228 60 26.0 2e-09 MKIASMEYKNGISNLLNSKFDENEVVVKKYENFEDIILEDDLSEFDLILVDMTHTRCIEL IQYIKQTTNIPVIYLTDRYKKSPYEAKIDDKDFVIHSYSRDEFVKFTLKKVEEINNSKII SFGFCSIEVDNGIFRIGNDILNLTKSEISLCTILIKKMNRPVSKEIIVKEMAKMGIETTD RSVREHVRKIRKEFKKVKLEPIKTIRGQGYSWVMESCDVGK >gi|325481645|gb|AEXN01000006.1| GENE 41 38987 - 40990 2137 667 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325846177|ref|ZP_08169246.1| ## NR: gi|325846177|ref|ZP_08169246.1| hypothetical protein HMPREF9246_0824 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0824 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 667 1 667 667 1109 100.0 0 MTKKQGKLALYIGQIAIQGILVILIALFLAKVKSLSDLYQSLQLAGDNIGGFIESLGFGF FKYINNFKDMISYLGFIKFLFFINLILLLVAIFIFKANLYEYVFSAVSCGLMLISYILIH PLVSFLNLAKSTLKGINFMNPNFSGFSGIEEKLENLGGQAQNLLLTFSPGRAKFAGFLLV LAIISFIASIYFLVMALTKKKYENVDDVDLEAVKESFKGSYKEAKRTLANASEGLSKKLR EEDSDKEVKDKKEDFSENKINPDQDFDKTRVLNRDDILNESFDKKEKKPSNSGEIRHGAY NFSSGFKKNYSDEHDGDKNIQDEKKDFDHEKINFDSQNEDFSHDDNENVDDNFKKTEKIN RDDDFKKSSPDPNGESSISLSKDQKKYVFIGLGVLAAIILFFAAKSIFFALKPDAEFDTS AVDLKFNVEGYSGYAKASASTTAAPVLSQFKNKYLQKDIEEAYTQKITLDKDKNIKNGDV VTATVEYTALPPYKVSFSDDKIEKKFKVKGLDKFLNSYKDLSQDTKDKFEGDIQKKISDQ YISDGSGFSTKTKNLEMELVGIFENKVPKDAISNNGVDKNGKSHKFQLAYIYKITYDKVS KKYDDDDNEVEKLEPKETVIVYQVDDISENNGAVNYNIRTPYSDLDEADAINKIKYDGFN KVDTEKE >gi|325481645|gb|AEXN01000006.1| GENE 42 41024 - 41701 489 225 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846201|ref|ZP_08169270.1| ## NR: gi|325846201|ref|ZP_08169270.1| CAAX amino terminal protease family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] CAAX amino terminal protease family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 225 1 225 225 327 100.0 4e-88 MKYLSKRFTGKYGFFKFIFLLLLMFLGPVPASYSILIRGVDKSVLYIMTGAYLLVAFLFF LIFYRRFKFSGGFSKNLMVLVVSIFAIYGLSFLLDLIFGSNLTNPQNQETIESMLRLNFS PALIAYIVFLGPLVEEYTFREYLPGVFRKIFKRRDQDVKDIIALIMANILFSLAHMPTDL YSFLVYFSIGFVLVLVRFFTNNLKLSGLVHIFWNLLSTLILYFAL >gi|325481645|gb|AEXN01000006.1| GENE 43 41862 - 42005 84 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695945|ref|ZP_03304073.1| ## NR: gi|212695945|ref|ZP_03304073.1| hypothetical protein ANHYDRO_00478 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00478 [Anaerococcus hydrogenalis DSM 7454] # 1 47 308 354 354 79 95.0 1e-13 YITKIRNEFFYHFPNQSGMISSKNLRKFVSEEEFDHIRENIKKSENE Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:23:34 2011 Seq name: gi|325481644|gb|AEXN01000007.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00003, whole genome shotgun sequence Length of sequence - 656 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) Predicted protein(s) >gi|325481644|gb|AEXN01000007.1| GENE 1 380 - 556 186 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYSLSNDCVFHNRVAPFGDLGVSAFCELTLVFVHLRPLSPSCAKASTLCPFFLDWKYL Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:23:49 2011 Seq name: gi|325481608|gb|AEXN01000008.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00001, whole genome shotgun sequence Length of sequence - 33432 bp Number of predicted genes - 39, with homology - 36 Number of transcription units - 18, operones - 8 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1566 173 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 1588 - 1647 3.3 - Term 1587 - 1644 8.7 2 2 Op 1 . - CDS 1667 - 3301 1436 ## COG0747 ABC-type dipeptide transport system, periplasmic component 3 2 Op 2 . - CDS 3304 - 3777 218 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 4 2 Op 3 . - CDS 3771 - 4013 229 ## COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase 5 2 Op 4 44/0.000 - CDS 3995 - 4807 253 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 6 2 Op 5 49/0.000 - CDS 4782 - 5558 477 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 7 2 Op 6 . - CDS 5558 - 6445 340 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 8 2 Op 7 . - CDS 6511 - 7104 481 ## COG1309 Transcriptional regulator - Prom 7145 - 7204 6.8 9 3 Tu 1 . - CDS 7238 - 7384 65 ## - Prom 7507 - 7566 6.8 + Prom 7223 - 7282 7.9 10 4 Tu 1 . + CDS 7452 - 7793 383 ## MGAS10750_Spy1711 hypothetical protein - Term 8004 - 8064 -0.9 11 5 Op 1 2/0.000 - CDS 8115 - 10019 1290 ## COG0210 Superfamily I DNA and RNA helicases 12 5 Op 2 . - CDS 10007 - 12097 1301 ## COG3593 Predicted ATP-dependent endonuclease of the OLD family 13 5 Op 3 . - CDS 12175 - 12522 477 ## Apre_0680 hypothetical protein 14 5 Op 4 . - CDS 12539 - 13012 330 ## Apre_0680 hypothetical protein 15 5 Op 5 . - CDS 13009 - 13596 635 ## Apre_0679 hypothetical protein - Prom 13617 - 13676 8.1 16 6 Op 1 . - CDS 14223 - 14906 530 ## gi|325846260|ref|ZP_08169277.1| hypothetical protein HMPREF9246_0015 17 6 Op 2 . - CDS 14896 - 15135 123 ## gi|325846274|ref|ZP_08169291.1| hypothetical protein HMPREF9246_0016 - Prom 15173 - 15232 2.9 18 7 Tu 1 . - CDS 15288 - 15614 353 ## HMPREF0424_0494 resolvase, N-terminal domain protein - Prom 15686 - 15745 3.1 19 8 Tu 1 . - CDS 15747 - 15842 72 ## - Prom 15865 - 15924 6.5 - Term 16014 - 16068 3.7 20 9 Op 1 . - CDS 16087 - 17754 1553 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 17785 - 17844 2.6 21 9 Op 2 . - CDS 17846 - 18007 326 ## M28_Spy1080 hypothetical protein - Prom 18039 - 18098 7.2 22 10 Op 1 . - CDS 18848 - 19780 831 ## COG2207 AraC-type DNA-binding domain-containing proteins 23 10 Op 2 34/0.000 - CDS 19777 - 21168 191 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 24 10 Op 3 . - CDS 21162 - 21857 526 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 25 10 Op 4 . - CDS 21857 - 22438 845 ## GALLO_1082 hypothetitical protein 26 10 Op 5 35/0.000 - CDS 22449 - 24170 273 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 27 10 Op 6 . - CDS 24167 - 25681 238 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 26049 - 26081 2.0 28 11 Op 1 . - CDS 26091 - 26237 68 ## 29 11 Op 2 . - CDS 26295 - 26426 71 ## HMPREF0837_11437 phage-associated protein - Prom 26457 - 26516 6.3 30 12 Op 1 . - CDS 26551 - 27027 556 ## HMPREF0837_11437 phage-associated protein - Prom 27049 - 27108 5.4 - Term 27039 - 27077 2.2 31 12 Op 2 . - CDS 27112 - 27723 622 ## COG0500 SAM-dependent methyltransferases - Prom 27750 - 27809 9.8 - Term 27809 - 27854 1.9 32 13 Tu 1 . - CDS 27927 - 28454 628 ## SPG_0962 hypothetical protein - Prom 28526 - 28585 8.0 33 14 Op 1 . - CDS 28639 - 28812 168 ## Apre_1789 hypothetical protein 34 14 Op 2 . - CDS 28886 - 30208 1372 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 35 14 Op 3 . - CDS 30288 - 30521 380 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Prom 30680 - 30739 5.1 36 15 Tu 1 . - CDS 30867 - 31157 351 ## Apre_1787 hypothetical protein - Prom 31334 - 31393 8.2 + Prom 31490 - 31549 2.7 37 16 Tu 1 . + CDS 31573 - 31875 295 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 31897 - 31937 1.5 38 17 Tu 1 . - CDS 32136 - 32630 434 ## gi|325846280|ref|ZP_08169297.1| conserved domain protein - Term 32824 - 32870 0.6 39 18 Tu 1 . - CDS 33060 - 33278 291 ## COG3655 Predicted transcriptional regulator - Prom 33307 - 33366 9.2 Predicted protein(s) >gi|325481608|gb|AEXN01000008.1| GENE 1 1 - 1566 173 522 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 334 522 133 321 398 71 28 8e-12 MDLIKQYVKKRKGSYFMSILLAIIGVLTGLFSYIYMAKIIVNLINGANDMSLYTPLCLSI LITFVIKEVAAGISTSISHTATFNSLGEIRNDISKKLFKMPLGDVLSRSSGELKNIIVEQ VDSMETSLAHLVPEFTANLVGPVLLFIYMFTLDWRLTLLSLIPFVVGMATMMSVMNAHYK EMFGKSVAIGQHMNNSIVEYINGIEVIKTFNQSESSYKKYSDAVYGNASFYYNWMGESMN RVAIGRLLSPMGIITIIPFGILFYINGSIDLGNLITLIVLSFATVSSILKIMNYMDDMSR ISTITSEIGKILDSRELENIDKGEKIESYNIELQDVDFSYDGKNKVIDNLSMEIKESSVS ALVGPSGSGKSTIAKLIAGFWNIDNGTIKIGNVETKDLSLEKLSSLISFVSQDNFLFDMT IKENIRLGNKNVSDEEIIDVCKKSACHDFIMNLSNGYDTRVGEGGGHLSGGERQRISIAR AMLKNAPIVILDEATSYIDPENEALIQNALANLVKGKTLIII >gi|325481608|gb|AEXN01000008.1| GENE 2 1667 - 3301 1436 544 aa, chain - ## HITS:1 COG:BH0567 KEGG:ns NR:ns ## COG: BH0567 COG0747 # Protein_GI_number: 15613130 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Bacillus halodurans # 1 522 1 517 539 224 29.0 5e-58 MIKLRKNMMVLLALVFSFSILLGGCQKNQEKAQENSNVASENTKDESKNVLTLCTAKELT NLTTLTMNKENNMACGLIYETLVAYENGEIVPKLAESFEYKDDGKTLVFKLKDGVKFSDG EDFNADAVKKILDFDKSNPNFAGIRAVAEIKSTEVIDDNTIAIHYENPSKFYINGFCFQN VLGMPSPKSFTEGNFETFNENIGTGPYVYEEFKSGEYTKFVRNENYHGEKPYYDEVIVKY IPDASSRLQALNKGEIDLIYGADLINYDDFKKGSEIKDVTGEVNKNRTLTKNLILNPSKK ELEDLKVRQAINYAINKKDIVDSLTYSYEDVAETLFPKDVAYCDANYPTIYSYAPEKANS LLDEAGWKLNKDTGIREKDGSPLKLQYVYWSDLVLAKETALAIKTQLKEVGIDVDLVEKD QMSWWTDGIKGEFHLTTWNTEGSYTEPHKFLQESITEMDPHLMPLKALSDSNIYIDAIKK ASTSTNEGEIKDNIQKAIVYSNENAMDLPLSYSKEMILYRNDKIGGYDFTSTPQFFNIYN VKAK >gi|325481608|gb|AEXN01000008.1| GENE 3 3304 - 3777 218 157 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 140 93 232 329 88 32 1e-27 KIRKYRKNIQSVFQDTSGTLNPGISTFKNLEEGLINLTNLSKKERKEKVLLFCEDLHLKK EILDVPVHQLSGGEQRRLSLIRALMVNPDFLILDEVTAGLDLLTIEKVLNLLFYYQSKHS ISYIFITHDINQAKQISDYIIEIKKGKILREGKLQRR >gi|325481608|gb|AEXN01000008.1| GENE 4 3771 - 4013 229 80 aa, chain - ## HITS:1 COG:mlr6287 KEGG:ns NR:ns ## COG: mlr6287 COG1123 # Protein_GI_number: 13475259 # Func_class: R General function prediction only # Function: ATPase components of various ABC-type transport systems, contain duplicated ATPase # Organism: Mesorhizobium loti # 15 80 318 386 616 62 47.0 3e-10 MGVDEIAMSNVSLSFETVKGTFKALEQISFSLKRGDNLSLIGESGSGKSTIAKALIGLER IDEGSILYDSVDISKLKLKK >gi|325481608|gb|AEXN01000008.1| GENE 5 3995 - 4807 253 270 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 7 250 3 256 563 102 26 8e-45 MQKKRIEGEDMILVNQLQVTDKKGNNLLNNISLRIPMGKIIGLTGPSGAGKTTLVNTILG ILSEDLKVSSGTITIDDFDILGKDNINSNNRNIAFIPQLPMISFDKRKKIKSQMVEIYIA NLNINKSEALSIAKDKLKSVNLEYERVLDSYPTELSGGMIQRVILAISMGLNTDYIIADE PTSALDNYNSSLFFELIKANFKGKGILLITHEADILKKYSDYIYVIENGCLIEKGSSKDI FESPKEEWTRKFVECSQKILDSGGEWEWTK >gi|325481608|gb|AEXN01000008.1| GENE 6 4782 - 5558 477 258 aa, chain - ## HITS:1 COG:BH2076 KEGG:ns NR:ns ## COG: BH2076 COG1173 # Protein_GI_number: 15614639 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 12 252 22 262 293 135 33.0 6e-32 MKINKRTLFPFLVILFIFFGSFFAPNDPLEVNLPLRFANPSSKYLLGNDSMGRCVLSRIL YGGKTTLFMVMTASIIVFTLGLLLGTLTSKVTMKKNVIVDSIINAVTAIPPIAYLIIFIA SWGNGIKTTLIALVVSYILRFLRLVRTQINIEYDKAYCTCMISLGASKTRLVLVHILPNI LLDLVHYICLSCADMILAITGFSFIGIGLGENVVEWGSMILEARDSIFIKPELIIYPIFA VFITTMSFNIIAKEANRR >gi|325481608|gb|AEXN01000008.1| GENE 7 5558 - 6445 340 295 aa, chain - ## HITS:1 COG:BH0568 KEGG:ns NR:ns ## COG: BH0568 COG0601 # Protein_GI_number: 15613131 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus halodurans # 3 285 16 298 314 169 33.0 7e-42 MTLLIVSVLSFVLMKLSPVDPATAYAKRHIGSPSPEQIEEVRLRFGFDKPLYEQYFNWIN NLFSLDLGQSLSNGKPVWDNIMLALPKTLSVVFFSAILQVVLVLSLGCITFLWKSKIINK LTNLLCLIGVSIPSFYIAIILLDVFAVKWDLLSVAGNIGITNYLLPAITLGIFGASFYYP LFKDALDKENGEYYIMFFRANGLKEFTLFMKHILPNSIVKLIPNFFQSIGLMIANVAIVE GVFSIPGFGYLIVNSVINRDATMIHGLVFFLALFIALANIISDLINDLLIKERGD >gi|325481608|gb|AEXN01000008.1| GENE 8 6511 - 7104 481 197 aa, chain - ## HITS:1 COG:BS_yfiR KEGG:ns NR:ns ## COG: BS_yfiR COG1309 # Protein_GI_number: 16077904 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus subtilis # 10 90 11 97 205 60 40.0 2e-09 MNDRKLKVGEKRKLEILEAAKTCFLEKGFQNTTMEDVIEKVSLSKGGVYYHYGSTYEMIY DFMKSGIKYRGEKNKTIDTSKLTSLDAITEMMMERIYDENEFKSIYAIFLKLQNEDKRLC EMFENLKETNTEILSSAFPPNDKLSSIFEDEFLVTFVNTLILGYESLNQKEIFIENKETI KKMLEEYLKNKFPELLG >gi|325481608|gb|AEXN01000008.1| GENE 9 7238 - 7384 65 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEHSVKVCSINFFVSVRTLTVLAIKVISVKRVLSFINYTAFKEINKEV >gi|325481608|gb|AEXN01000008.1| GENE 10 7452 - 7793 383 113 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 113 35 147 152 175 91.0 6e-43 MANRFRNERIEIKLTKEEKEVFEKKMKLANCKTMSHFLRKCVLEKEIYVVDLEPFRDLQW LLSNATNNINQIAKATNTTGVIYKNEIESMNKQIEKLSKEIWQIHSLLLNKSK >gi|325481608|gb|AEXN01000008.1| GENE 11 8115 - 10019 1290 634 aa, chain - ## HITS:1 COG:lin1871 KEGG:ns NR:ns ## COG: lin1871 COG0210 # Protein_GI_number: 16800937 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Listeria innocua # 23 263 25 306 731 61 26.0 7e-09 MDTLTLEKEVLEALQCIKNGENFILEGGAGSGKTYSLISLINALTEELPDIKIVCITYTN NAVAEILSRIENENIWVSTIHEFIWSLIRKYQNEIKNILVELINDDNEKNFKKPKDFSED LISKEYFENLYVDYDEYYSVTPNEENRVKISHNHILIVAEKMFEKYKKIADILKDIADCI FVDEYQDTSPLVADILLKHLEQSDKKNVIGFFGDSMQSIYDDGVGNLNQYNLTKIVKTQN RRNPRVVIEVANKFRDDDIEQRPSEDINAPNMENGTIREGSIKFLYGTEINDFISVKGKN IFESWDFSDGKQTKELRLTHKYNAEMTGFKDLYDLYNADLITKLISGIKKKIDKGNLECN KTLGEIALEVKPTYNKVELLDQINGNEIYQSIYSVLEDMSWEEAYEKCRITKESLMSYKL NGMSGRYEANSYRDRILRRLDILEEIIELYEANRFNDFLRITKFSIHNRNDKICLKQAID YLVSEDNQTIENVLKFAEVKGLLKEDELFSDYISNKGFYLWERIKKITFNQYRKSVLYLK EFSPICTQHSVKGSEYDNVLLVLESDWNKYDFRTLFGKGSPNSNVQKRTKKLFYVCITRA KKNLIIYMPTDDSDILEKAKEYFGEENVIDLSSI >gi|325481608|gb|AEXN01000008.1| GENE 12 10007 - 12097 1301 696 aa, chain - ## HITS:1 COG:PA1939 KEGG:ns NR:ns ## COG: PA1939 COG3593 # Protein_GI_number: 15597135 # Func_class: L Replication, recombination and repair # Function: Predicted ATP-dependent endonuclease of the OLD family # Organism: Pseudomonas aeruginosa # 261 620 256 635 665 135 29.0 2e-31 MILKKMKVKNFRLLKNFELNFKDELSLVIGKNNCGKTSSIIVLDKMLNSSKLFWEDINLE CQKDLYKKIIGFDITKLDEVQLLETINMQLFIEYNDNDSYENIQKFMMDLNPDNNIIVLE FISVIAAKKIIELKNIISEKNIEDFKSFSKFMSKNFANFFETKKYSRGFDVEANKTTQDR SEEIDNKDIQKVIKVAGIRADRAVSNDDRNHVLSGLTGKYFSSYKAAKDESESVFTRLEE KLEEADKELYKIYNGEKSEGEEPIDGIFSDVIDVIKTYGGAENGIDIAIESSISEKNLLS DNTNLSYRQGGDYSLPETYNGLGYLNLIGILFEIETNIQELFEQPADINLLYIEEPEAHT HPQLQYIFIRNIKSHIKAHRNKLLKEKNKQLQILITSHSSHIVSECNFDDIIYLKKNGNT VIAKSFNSLKEEYVGDEQKGFKFVKQYLTMNRSELFFADKAICIEGDTERILMPVMMHKI DNKEKPRADIIPLLSQNISIIEVGAHSHIFMPLFSFLGTKVLFVTDIDSVKAEKKIDKNG KERTVYTSCHPDEGTHTSNASIKEFFKDTGIDTSNNQFKELVGKNAEDKIKDNMRMAYQI PESYGEYQASSFEDAFIALNKDFILKNKEGFYQYGALKDFSNDEIENGDYYNFALNNVKK KSAFASSLLYFDNENGEEDEKWAVPHYIEEGLLWIR >gi|325481608|gb|AEXN01000008.1| GENE 13 12175 - 12522 477 115 aa, chain - ## HITS:1 COG:no KEGG:Apre_0680 NR:ns ## KEGG: Apre_0680 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 115 164 278 278 178 94.0 8e-44 MAYPLETILAEKYETIIRRNITTTRMRDFYDLYTLYKLKKDEIDYKILKEAIERTSYKRG SQEEMQDYEEIIEDIKEDSYLRSLWEVYLSENKYIGDLSFDKVVDVVRIVSKTTS >gi|325481608|gb|AEXN01000008.1| GENE 14 12539 - 13012 330 157 aa, chain - ## HITS:1 COG:no KEGG:Apre_0680 NR:ns ## KEGG: Apre_0680 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 157 1 157 278 257 95.0 8e-68 MINIESIKGKIRSLAEKKNLKSQEVLQIYFFERFLERLSKSSYKNNFVIKGGFLISSLIG IENRTTMDMDTTIKGIALKEEKIKEIVQEIININVDDGIRFEIKDISYIREEDEYENFRI SLIANVGKTKNPMKLDLTTGDAITPREIEYTYPCIFS >gi|325481608|gb|AEXN01000008.1| GENE 15 13009 - 13596 635 195 aa, chain - ## HITS:1 COG:no KEGG:Apre_0679 NR:ns ## KEGG: Apre_0679 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 195 1 195 195 345 96.0 7e-94 MNTLKEFIQENLVITNKEAEELGYTRHNLSELTKIGQLERLRPGLYQLKGKVIDDFVLIS SNSNRIIFSHQTALYLHDLSDRTPNVFHISVPQGYNASHIKKRYEDLQVHYVKKDLYEIG KTEIKSPQGNLIPVYDIDRTICDIIIDREKIDKQIFTEALKRYFKSPNKNLRRLIKYSRL FKIEDEIRKYMEVLS >gi|325481608|gb|AEXN01000008.1| GENE 16 14223 - 14906 530 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846260|ref|ZP_08169277.1| ## NR: gi|325846260|ref|ZP_08169277.1| hypothetical protein HMPREF9246_0015 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0015 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 227 1 227 227 442 100.0 1e-123 MKNKHIYGDLNSTIDDKSRYKELLTVEECREWGDYYSNWAKRYKEIMSLFEKIKANRTSE TAPIECYCGNSYREINKNLRFGYNSDKHLYDKMVDILIMTLCSAPKIKDDIVVYRVVNDI FIKELIRNNKLPDSIPTQEKGFMSTSLLKDIVNVYSGGGSGLYLLKIYVPKGTVGVYVNT VTRRDEEEILLAPNNFLRLIEYPYYDENYSIKIFECQLVYPVQKLPN >gi|325481608|gb|AEXN01000008.1| GENE 17 14896 - 15135 123 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846274|ref|ZP_08169291.1| ## NR: gi|325846274|ref|ZP_08169291.1| hypothetical protein HMPREF9246_0016 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0016 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 79 1 79 79 93 100.0 4e-18 MLENEKYTGSVKLLDSVNKENYYLLKDNHEAIITEEVFNKVQKEKVSRINLGEKNNRNSR KYSSKFSCKNKEMDNKYEE >gi|325481608|gb|AEXN01000008.1| GENE 18 15288 - 15614 353 108 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0494 NR:ns ## KEGG: HMPREF0424_0494 # Name: not_defined # Def: resolvase, N-terminal domain protein # Organism: G.vaginalis # Pathway: not_defined # 1 97 83 179 321 90 46.0 2e-17 MLEDIKKEDVNIIVTKSVSRFGRDTVDALEALKVIKQASARIIFEQENLDSQEDDADMII SIMETLAQSENEQRSENIRWDLKQKAAQVTSKLYNRSAMDMIMMIMES >gi|325481608|gb|AEXN01000008.1| GENE 19 15747 - 15842 72 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKKINLILPKKQFQIQRVGIYARVSTTDKD >gi|325481608|gb|AEXN01000008.1| GENE 20 16087 - 17754 1553 555 aa, chain - ## HITS:1 COG:SP1040 KEGG:ns NR:ns ## COG: SP1040 COG1961 # Protein_GI_number: 15900911 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Streptococcus pneumoniae TIGR4 # 1 555 1 555 559 983 96.0 0 MSKEKIKVYLYTRVSTSIQIEGYSLEAQKSRMKAFAIYNNYEIVGEYEDAGKSGKSIEGR IQFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYGVNLICVEDGIDSSK DAGKLMISVLSAVAEIERENIRIQTMEGRIQKAREGKWNGGFAPYGYKLEDGKLFINEEE AVAIRTIFDQYVNTTIGANGLSKYLENHGIRKIPRQNGKNPLFDAGLIRKILKNPVYNGK IAFGRRTLEKVHGTRNEYKQVEQDEYLISEGIHEAIVSDEVWQAAQVKLKSQAKKYEHVN KGKDTRTHLLSGIVKCPICGVGMFGNKCTKKKKDGTKYKDFYYYGCKHRQMIRGHKCTFS KQIREELLDDAVAEVIVKIVSNPKFASMMQEKINMKVDTSEIEKEIDNYQKELRKSHSTK FKLIEEIDNLDVEDKHYKRRKQDLDDRLYRMYDKIDELESSLIDAKAKKQTIEAEKLTGD NIYKVLIYFDKLYKVMNDVERRQLITALISEIQVYEEKQPNGQWLKSITFKLPIIDDDLN ISLDNDEQVESVVLM >gi|325481608|gb|AEXN01000008.1| GENE 21 17846 - 18007 326 53 aa, chain - ## HITS:1 COG:no KEGG:M28_Spy1080 NR:ns ## KEGG: M28_Spy1080 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS6180 # Pathway: not_defined # 1 53 1 53 53 81 100.0 1e-14 MDNDWNGLADLIANLIAKYAGALDLDNLPDPTPAKNQEMKNSFDKAKTQIETD >gi|325481608|gb|AEXN01000008.1| GENE 22 18848 - 19780 831 310 aa, chain - ## HITS:1 COG:BH1958 KEGG:ns NR:ns ## COG: BH1958 COG2207 # Protein_GI_number: 15614521 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus halodurans # 159 308 363 508 516 73 29.0 7e-13 MKENRLKSWGFEEFPTEDPRIINYIGLESPENKMTSYEIFPGVFVLYISLKKKYNAHNSS TEGNRGYRIGYCYEGNHFTYINNSKVLITTNEIFVGRSIPNSKFSSTTSHRTTAFNIVIA DKILDKNSPYFPYIGEFIYKFKNVKDMGCAIKNEDLVKLANELIQALKERDMLFIKLKSL ELIYRIGKVGINPSKTNYFTPGGDKLMEEVEKYMKENLDKNLNLDHLAKKFKISKSTLNT KFTRSFQYTPMKYIQRLKLIYSEDLLINTDKSILEISNDLNFQNPSNFNRAFKDFTGLSP SQYRKQNEPE >gi|325481608|gb|AEXN01000008.1| GENE 23 19777 - 21168 191 463 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 291 450 26 197 305 78 29 6e-14 MLEFKNFSLSFKEDEGENRILEDINLKFEKGSINVITGRSGCGKSSLIKTINGIIPEVDM AKMEGDLLFDGESILKLDITDRSKFISTVFQNPKNQFYAINSLDEIAFALENRNVSRDKI YEKIEYFSKLLNSQDLLGNDLFKLSGGQKQLIAINSVAVMDNEIYIFDEPSASLDRESIE KLTHCLEVLKSLGKIIIIAEHRLYYLKEIMDRLLVIENRKILSYSKDRISEEILEKHRLR TLKDIEKEELISKSYEVKNLFDHSFDEEKSLVCRDFSCQYEKNPKLFDFSMSFDPGIYFI IGANGIGKSSFIRNLCGLNKKQKGEVFYKNRRIKNHGDYISLVMQDINYQLFTESVLTEM KIVTDDEKKIEEILKKLELWDRRESHPQKLSGGEKQRLALGLAMASPKEIVVLDEPTSGL CFENMKRLIGILKEMKDEGKTIIVISHDYEFIKNSKENIVEFV >gi|325481608|gb|AEXN01000008.1| GENE 24 21162 - 21857 526 231 aa, chain - ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 87 213 9 130 147 67 36.0 3e-11 MKIDFRTKLFLTIIIGVSATEGSISMSYKYLGILLAIFPYLLAILDKKWSLIGKGLFYTG IAVVGQIVASKYPNSYLGMVFNLYCGIILRILPGVMMGYYTVTTTKMSDLVYSLKKIKFP DYIIIPISVMFRFFYSIKEDYKIIGEAMYMHGLTMKNFFKNPAKILEYRFVPLLMIVSQT ADNVAISAMTRGMKMNKERSSISCARLKTADYVLLSFGIYIIILFIRIKIC >gi|325481608|gb|AEXN01000008.1| GENE 25 21857 - 22438 845 193 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1082 NR:ns ## KEGG: GALLO_1082 # Name: not_defined # Def: hypothetitical protein # Organism: S.gallolyticus # Pathway: not_defined # 4 193 6 195 195 217 60.0 2e-55 MNKFGIRDLINAGVFSLLTVMALWCGGMIGFIPVLMPLVPFACGLVSGPVFMLYSTKIDK FGMILIMGIVFGLTFSMSGHGAIVLPAIILLSLICEIILKKGGYKSIKTARLTYTVFMIF AAANLIPIYFARDAYLQSLIDQGYGAEYAEKLLSVMPNWSFIPVVLLGMLGGYIGCTIGI KILNKHFKKAGMA >gi|325481608|gb|AEXN01000008.1| GENE 26 22449 - 24170 273 573 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 313 565 266 522 563 109 30 2e-23 MKNYLKDRFALTDKGAEGTIVAIKYSTLKNLSYMLPMFLLMYVMQGLLGLGKFNLKISVV LYIVIALIMIFVINKDYITTYNETYKESANLRIELSEIIKDLPLSFYSKRDLTDFSQTIM KDVEAMEHGLSHAVSGFYGFIINLVIISILLLIGNVKLGLAVIAPIYISAILNLTSTKIQ KKATATYYKEQRKSSKMFQELIDLSTEIKSYNLTEEKEKSGIDFVRSLEKKHIKSELGQV IPIVSATVVANLSLALAIYVGLNSLINGEINILYFAGYLFASARLIDGVAAFNQFYGELM YMDSPIEKIKALRSEEIQPGRETEFKSFDIEGKNVEFSYLDDKKVIDNISFKALQGKTTA LVGPSGCGKSTLIKLVARLYDYDRGEILIDKKEINKARTEDLFKHISMVFQDVILFNGSV MENIRLGRPTASDEEVLEAARLANCDEFVKKLENGYDTEIGENGSNLSGGERQRISIARA FLKDAEIILLDEIAASLDVENEKYIQESLNKLIKNKTVMIVSHRMKSIRNVDQIIVMKDG KIEDFGKHDELIKESKTYQKMIESSKKSEEFIY >gi|325481608|gb|AEXN01000008.1| GENE 27 24167 - 25681 238 504 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 272 491 15 239 245 96 27 2e-19 MSHLAGFRLETRLREKGLRHLLRASNTFFDTHNSGEVRKIIDNNVEQTHMIVAHLITDQT MAALTPILMIALTFAIDIYLGIFFVIIILLSMYLLYKMIGDQSFMKKYMEKLDEMNAGAV EYVRGMPVVKIFNTPLIGFTKLYDSIMVYKDMVYKYSMSCRIPYVLFQWLLNIFIITPVF LAIFMVSKGQDPNIWSAKILFFTLFMGLFFVDLMKIMYVSMYVFQANSAVDNLENLFTEM KEKEIVFGTQKDLQKKNIIFKNVDFSYDDKNKILHNFSLNLDENKVYALVGSSGSGKSTI AKLISGLYPVDSGEILIGDRNISSYDGESLMKNIGIVFQNPKLFQGISIFENVKLANKDA DDEEVYKALKLARCDDFIDKFKDKYDAIIGAEGINLSGGEKQRISIARIFLKDPKIIILD EASAAADPENEYELQIAFKELIKDRTTIMIAHRLSSIRGVDEILLVEDGKILERGSHDEL MKEDSRYKKFIEMYNEANEWRVDL >gi|325481608|gb|AEXN01000008.1| GENE 28 26091 - 26237 68 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPEIKKYKYDTLKAIRKLKKSQKTFRCKCQPQNGPQLLSESGPHIVKN >gi|325481608|gb|AEXN01000008.1| GENE 29 26295 - 26426 71 43 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_11437 NR:ns ## KEGG: HMPREF0837_11437 # Name: not_defined # Def: phage-associated protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 43 198 240 240 70 88.0 2e-11 MKSSGKTYQNHYATILNWYEGDKDKLTQKGLNKKMNYDVGESL >gi|325481608|gb|AEXN01000008.1| GENE 30 26551 - 27027 556 158 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_11437 NR:ns ## KEGG: HMPREF0837_11437 # Name: not_defined # Def: phage-associated protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 157 1 157 240 243 96.0 1e-63 MAINKRYYWIKLKEEFFTDKRIKRLRRISGGDTYTIIYLKLLLLSLKDEGKLYYDGVESD FIKELALTIDETDDDVMVTVNYLINQGLLEVVTENDEYYLTEIPNLIGSETAWAEKKRRY RQNKQRTLSLMSPTHVRQEIEIEKDIEIDKERGRDIKR >gi|325481608|gb|AEXN01000008.1| GENE 31 27112 - 27723 622 203 aa, chain - ## HITS:1 COG:CAC0567 KEGG:ns NR:ns ## COG: CAC0567 COG0500 # Protein_GI_number: 15893857 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 18 197 19 203 209 132 42.0 3e-31 MLKKFFENVKNPKNNFGGRFMVKGMNVGHEKLAKWGRSFLHIKTSDVVLDLGCGGGRNVQ YFLTKAKKVYGMDYSKTSVDIASSVNSEAIRDGRCKIIEADVAKLPFEDESIDIVTAFET IYFWKNIEVSFREIHRVLIKDGQFLICNEGAYREHKNIKKWADMLDFEVYSPEYLTETLN KIGFKCEYHLDEEDHLVFLARKL >gi|325481608|gb|AEXN01000008.1| GENE 32 27927 - 28454 628 175 aa, chain - ## HITS:1 COG:no KEGG:SPG_0962 NR:ns ## KEGG: SPG_0962 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 175 1 175 175 178 96.0 1e-43 MINEEISKEAGQAAQTIITYTIKAAKESINLEKEIRKKMNETLEKANGNLKSLMGDEMKI KDLYKKGQLENISIDQCDLKDLKKELNKLGVSFSVMKNKESNNYEIFFQAKDIKVMEYAF KQVIAKENKKEKESILKQITKYKDLSKNKDKTKEKVKRKVKEKVKPNKKDMTREI >gi|325481608|gb|AEXN01000008.1| GENE 33 28639 - 28812 168 57 aa, chain - ## HITS:1 COG:no KEGG:Apre_1789 NR:ns ## KEGG: Apre_1789 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 57 1 57 57 72 91.0 8e-12 MNKRQELIDELIKADQDGTYKTYKSTEEIKAMNNAEVQILYSNMKNYLSDIRTHTNY >gi|325481608|gb|AEXN01000008.1| GENE 34 28886 - 30208 1372 440 aa, chain - ## HITS:1 COG:mll5729 KEGG:ns NR:ns ## COG: mll5729 COG0507 # Protein_GI_number: 13474766 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 1 158 104 239 1015 84 31.0 4e-16 MIEEYVQNNFVKEGMIVDLAIHDESREGNQNIHAHIMTIVRPINEDGTWGQKSKKEYILD GKGEKILNKNGKPKTRKVELTSWNDKGNVEKWRENFSDLCNEYLAKNKIEKRVDHRSFKR QGIKQIPTIHLGASASAMERKGIRTEKGDINREIKKQNELLKNIGNEIKKITTWLVGFKD KLKESYKEYKDQSKKQIENESGLFNLYEYLSFYQEMQENNRAELSFYGKRNKAIYDLKRY ASGINYLREHKIKTISDLQGHINILRSKNSEIYKTIKENSQKIEDLNKCLAYAKTVRKTK ATYQEYESKKIFKESFYKNNQKEIDQHIRARNLIEKISGKKNLREKEWLGEIKNLEDEIS KLNTESEKIRERYKEINHIKYAVEVVNEEYGIDLSIEIDKAIKRGEKESIIEKIKEYKKD SDKFNKKRQSTKDYYKNQER >gi|325481608|gb|AEXN01000008.1| GENE 35 30288 - 30521 380 77 aa, chain - ## HITS:1 COG:AGl66 KEGG:ns NR:ns ## COG: AGl66 COG0507 # Protein_GI_number: 15890136 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 76 15 87 1277 66 45.0 1e-11 MADSFHFSVNIISRGKGKSAVASAAYISGEKIKNEWDGVTHDYTKKQGVISKEIFLPDHA PKEYKDRKTLWNSVELF >gi|325481608|gb|AEXN01000008.1| GENE 36 30867 - 31157 351 96 aa, chain - ## HITS:1 COG:no KEGG:Apre_1787 NR:ns ## KEGG: Apre_1787 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 96 1 96 96 93 93.0 2e-18 MKKLEQIRQESKEIKDKIDDKEERLRQLKNQEKKILKQDIVKRRKERTHRLITRGAILES LIENAEELTDEEIKILLEEATKTKEFKETLKIMRAN >gi|325481608|gb|AEXN01000008.1| GENE 37 31573 - 31875 295 100 aa, chain + ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 2 100 232 330 330 168 87.0 2e-42 MNVNQETLEKISTMSGTKLKNLFKEKYGQSITEYTQRKRMNVAETLLLNTKLPIKEIAQS VGYASHSKFSIYYKRYKGKLPSEVRSLACEHHNLNCDCCD >gi|325481608|gb|AEXN01000008.1| GENE 38 32136 - 32630 434 164 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846280|ref|ZP_08169297.1| ## NR: gi|325846280|ref|ZP_08169297.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 164 1 164 164 260 100.0 2e-68 MKTLGMLTIICLTASIMMVNFILIIPKFGSKHFGAPDDIKAMMSKLPDKPIWVNIFGGLI MILGLLTIAAVLVWAIVDTVKFSLTFQQAFVRFLILFEGYKLFDIIFFDYLMLTKLKLPT KVYPETVGAKGYDNFGFNGKSQIAKIIIFFFVSLILAYLLTVLV >gi|325481608|gb|AEXN01000008.1| GENE 39 33060 - 33278 291 72 aa, chain - ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 71 1 71 72 131 95.0 4e-31 MALNYKPLWIQLAKKGLKKTDVIAMAGLTTNVMAQMGKDKPITFKNLERICKALSCTPND IISFEDEFEKEI Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:25:08 2011 Seq name: gi|325481585|gb|AEXN01000009.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00019, whole genome shotgun sequence Length of sequence - 28852 bp Number of predicted genes - 28, with homology - 26 Number of transcription units - 12, operones - 8 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 277 - 321 11.1 1 1 Op 1 . - CDS 331 - 1245 651 ## SPSINT_2113 hypothetical protein 2 1 Op 2 . - CDS 1260 - 2261 1080 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 3 1 Op 3 . - CDS 2258 - 4435 1115 ## SPSINT_2115 hypothetical membrane protein 4 1 Op 4 . - CDS 4438 - 6885 1285 ## SPCG_0166 hypothetical protein 5 1 Op 5 . - CDS 6869 - 7099 156 ## SPH_1415 conjugative transposon membrane protein - Prom 7181 - 7240 4.0 + Prom 6971 - 7030 3.3 6 2 Tu 1 . + CDS 7098 - 7244 72 ## - Term 7311 - 7348 3.1 7 3 Tu 1 . - CDS 7350 - 7847 663 ## SPG_1237 Tn5251 hypothetical protein 8 4 Op 1 . - CDS 7964 - 8185 293 ## SPG_1238 Tn5251 hypothetical protein 9 4 Op 2 . - CDS 8228 - 9376 1091 ## COG2946 Putative phage replication protein RstA 10 4 Op 3 . - CDS 9456 - 9641 296 ## HMPREF0837_12194 hypothetical protein 11 4 Op 4 . - CDS 9611 - 10450 1023 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 12 5 Op 1 . - CDS 11043 - 11426 561 ## CD0497 conjugative transposon protein 13 5 Op 2 . - CDS 11445 - 11759 471 ## SPH_1425 conjugative transposon protein 14 5 Op 3 . - CDS 11781 - 11861 57 ## - Prom 12066 - 12125 10.8 - Term 12104 - 12151 11.4 15 6 Op 1 40/0.000 - CDS 12158 - 13120 915 ## COG0642 Signal transduction histidine kinase 16 6 Op 2 . - CDS 13197 - 13880 727 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 13946 - 14005 9.1 17 7 Tu 1 . - CDS 14305 - 14451 146 ## gi|227500017|ref|ZP_03930096.1| hypothetical protein HMPREF0077_0731 - Prom 14525 - 14584 4.2 - Term 14528 - 14571 2.1 18 8 Op 1 . - CDS 14804 - 15076 261 ## COG3077 DNA-damage-inducible protein J 19 8 Op 2 . - CDS 15157 - 15381 199 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 20 8 Op 3 . - CDS 15384 - 15905 168 ## Apre_1829 hypothetical protein 21 8 Op 4 . - CDS 15928 - 16398 425 ## Apre_1828 hypothetical protein - Prom 16421 - 16480 8.5 22 9 Tu 1 . - CDS 16495 - 16629 134 ## gi|325846343|ref|ZP_08169333.1| hypothetical protein HMPREF9246_0841 - Term 16981 - 17010 2.1 23 10 Op 1 . - CDS 17016 - 17672 794 ## HMPREF9243_0166 hypothetical protein - Term 17684 - 17714 1.0 24 10 Op 2 . - CDS 17716 - 25359 7181 ## COG4646 DNA methylase - Term 25382 - 25419 2.3 25 11 Op 1 . - CDS 25436 - 25891 460 ## Bsel_0783 hypothetical protein 26 11 Op 2 . - CDS 25881 - 26537 353 ## Bsel_0782 hypothetical protein - Prom 26720 - 26779 6.3 - Term 26710 - 26759 2.1 27 12 Op 1 1/0.000 - CDS 26790 - 27737 654 ## COG0270 Site-specific DNA methylase 28 12 Op 2 . - CDS 27730 - 28851 1075 ## COG0550 Topoisomerase IA Predicted protein(s) >gi|325481585|gb|AEXN01000009.1| GENE 1 331 - 1245 651 304 aa, chain - ## HITS:1 COG:no KEGG:SPSINT_2113 NR:ns ## KEGG: SPSINT_2113 # Name: not_defined # Def: hypothetical protein # Organism: S.pseudintermedius # Pathway: not_defined # 1 304 7 310 310 557 100.0 1e-157 MMKFRKNQNKEKQIPKEKKPRVYKVNPHKKVVIALWVLLGLSFSFAIFKHFTAIDTHTIH ETTIIEKEYVDTHHVENFVENFAKVYYSWEQSDKSIDNRMESLKGYLTDELQALNVDTVR KDIPVSSSVRGFQIWTVEPTGDNEFNVTYSVDQLITEGENTKTVHSAYIVSVYVDGSGNM VLVKNPTITNIPKKSSYKPKAIESEGTVDSITTNEINEFLTTFFKLYPTATASELSYYVN DGILKPIGKEYIFQELVNPIHNRKDNQVTVSLTVEYIDQQTKATQVSQFDLVLEKNGSNW KIVK >gi|325481585|gb|AEXN01000009.1| GENE 2 1260 - 2261 1080 333 aa, chain - ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 210 332 2 124 124 144 59.0 2e-34 MKLKTLVIGGSGLFLMVFSLLLFVAILFSDEQDSGISNIHYGGVNVSAEVLAHKPMVEKY AKEYGVEEYVNILLAIIQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGVKYFSELLA SSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIP INGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIMDEALKYEGWRYVYGGASPTTSFDC SGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLG NNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ >gi|325481585|gb|AEXN01000009.1| GENE 3 2258 - 4435 1115 725 aa, chain - ## HITS:1 COG:no KEGG:SPSINT_2115 NR:ns ## KEGG: SPSINT_2115 # Name: not_defined # Def: hypothetical membrane protein # Organism: S.pseudintermedius # Pathway: not_defined # 1 725 1 725 725 1332 99.0 0 MKPSIVNRIKSNWTLKRLGKVAMTVAFTLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYS RYPLENYQLDFYVDNSWGWLPWNWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQE AYSLDFISATADSIGKNMQTLAGVSANGFSTEGFYVGFLLLLILVLGVYVAYTGLIKRET TKAIHAIMNFVLVFILSASFIAYAPDYIKKINDFSSDISNASLSLGTKIVMPHSDSQGKD SVDLIRDSLFSIQVQQPWLLLQYNSSDIESIGIDRVESLLSTSPDSNNGEDREKIVAEEI EDRSNTNLTITKTINRLGTVFFLFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFI LSMIPSFDGMSKRAITKLFNTILTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIV TFAGIYFKLGDLMSMFSLQSNDSQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTTLGSGS AIVTGKKGQSGSGSSARTQADHSRPDGKEKSTLGKRIGQTIGTVADTKDRMVDTASGLKE QVKDLPTNARYAVYQGKSKVRENVRDLTSSISQTKADRASGRKEQQEQRRKTIAKRRSEM EQVKQKKQPASSVHERPTTRQEQYHDEQTSKQSNIQTSYKESQQAKQERPAVKSDFSSPK VERQGNTVQEKTVQKPATSTTTADRTSQRPITKERPSTVQRVPLQNTRSRPPIKTATIKK VGKKP >gi|325481585|gb|AEXN01000009.1| GENE 4 4438 - 6885 1285 815 aa, chain - ## HITS:1 COG:no KEGG:SPCG_0166 NR:ns ## KEGG: SPCG_0166 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 815 18 832 832 1582 99.0 0 MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHA LQISTESSIRSAQERSKNEVTGKLKAVAYDKIDQQTDALISMIGENQVNYRFFIGFKLLL NDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDEILRFQKMEKLLENKISRRFK IRRLDKDDFGYLIEHLYGQTGTAYEEYEYHLSKKKLDNETLIKYYDLIKPTRCLVEEKQR YLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANRKALS TVRNKKKELKDLDNHAWQSDNETSSNVAEALESVNELETNLDQSKESMYKLSYVVRVSAN DLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPASKRYMNDYIQYVTSDFLAGL GFGATQMLGENEGIYVGYSLDTGSNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFA NNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEISHEINIVTLTSDEKNKGLLDPYVIMK NPKDSESLAIDILTFLTGISSRDGERFPILRKAIRAVTNSEVRGLMKVIEELRVENTPLS TSIADHIESFTDYDFAHLLFSNGYVEQSISLEKQLNIIQVADLVLPDKETSFEEYTTMEL LSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVY FVTQNTDDLLDEKLKNNLGLKFAFRSTDLNEIKKTLAFFGVDPEDENNQKRLRDLENGQC LISDLYGRVGVIQFHPVFEELLHAFDTRPPVRKEV >gi|325481585|gb|AEXN01000009.1| GENE 5 6869 - 7099 156 76 aa, chain - ## HITS:1 COG:no KEGG:SPH_1415 NR:ns ## KEGG: SPH_1415 # Name: not_defined # Def: conjugative transposon membrane protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 76 93 168 168 144 100.0 1e-33 MIEGAFLKYFGIPVAFTWFMSTKTFDGKKPYGFLKSVIAYALRPKLTYAGKKVTLGRNQP QEAITAVRSEFYGISN >gi|325481585|gb|AEXN01000009.1| GENE 6 7098 - 7244 72 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERGGKLPSIITAKSDTTNHVICVKVMGNGSLKSLIEYSTFSTDQILV >gi|325481585|gb|AEXN01000009.1| GENE 7 7350 - 7847 663 165 aa, chain - ## HITS:1 COG:no KEGG:SPG_1237 NR:ns ## KEGG: SPG_1237 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 165 1 165 165 295 100.0 5e-79 MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEY TSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYY IEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY >gi|325481585|gb|AEXN01000009.1| GENE 8 7964 - 8185 293 73 aa, chain - ## HITS:1 COG:no KEGG:SPG_1238 NR:ns ## KEGG: SPG_1238 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 73 1 73 73 103 100.0 2e-21 MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVK DILLELFNRIIGA >gi|325481585|gb|AEXN01000009.1| GENE 9 8228 - 9376 1091 382 aa, chain - ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 49 367 25 340 352 241 41.0 1e-63 MAYGLSQNRLAVATGITRQYLSDIETGKVKPSEDLQQSLWEALERFNPDAPLEMLFDYVR IRFPTTDVQQVVENILQLKLSYFLHEDYGFYSYSEHYALGDIFVLCSHELDKGVLVELKG RGCRQFESYLLAQQRSWYEFFMDVLVAGGVMKRLDLAINDKTGILNIPVLTEKCQQEECI SVFRSFKSYRSGELVRKEEKECMGNTLYIGSLQSEVYFCIYEKDYEQYKKNDIPIEDAEV KNRFEIRLKNERAYYAVRDLLVYDNPEHTAFKIINRYIRFVDKDDSKPRSDWKLNEEWAW FIGNNRERLKLTTKPEPYSFQRTLNWLSHQVAPTLKVAIKLDEINQTQVVKDILDHAKLT DRHKQILKQQSVKEQDVITTKK >gi|325481585|gb|AEXN01000009.1| GENE 10 9456 - 9641 296 61 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_12194 NR:ns ## KEGG: HMPREF0837_12194 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 12 61 1 50 50 85 98.0 5e-16 MRSGSRRCGLILLAGVAIATPALNPPYLTGGYKSTGNSQKNIRKSFGYKGFTKFQRMSNG L >gi|325481585|gb|AEXN01000009.1| GENE 11 9611 - 10450 1023 279 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 3 273 191 461 480 316 58.0 2e-86 MEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEYDKLPHMLIAGGTGGGKTYFILTLI EALLHTDSKLYILDPKNADLADLGSVMANVYYRKEDLLSCIETFYEEMMKRSEEMKQMKN YKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTAVMNKLKQIVMLGRQAGFFLILACQ RPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSDVQKDFFLKRIKGRGYVDVGTSVIS EFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVAGVD >gi|325481585|gb|AEXN01000009.1| GENE 12 11043 - 11426 561 127 aa, chain - ## HITS:1 COG:no KEGG:CD0497 NR:ns ## KEGG: CD0497 # Name: orf22 # Def: conjugative transposon protein # Organism: C.difficile # Pathway: not_defined # 1 127 1 127 128 213 89.0 2e-54 MRLPNGIVLDKDATFGELKFSALRREVRIQNDDGTVSDEIKERTYDLKSKGQGRMIQVSI PASVPLKEFDYNAKVEIINPVADTVATATFRGADVDWYIKADDIVLTKDSSTFKNQPQPK KEPATDK >gi|325481585|gb|AEXN01000009.1| GENE 13 11445 - 11759 471 104 aa, chain - ## HITS:1 COG:no KEGG:SPH_1425 NR:ns ## KEGG: SPH_1425 # Name: not_defined # Def: conjugative transposon protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 104 1 104 104 197 97.0 1e-49 MELKFVIPNMEKTFGNLEFAGEDKVEQRRINGQLTVLSRSYNLYSDVQRADDIVVVLPAE AGEKHFGFEERVMLVNPRITAEGYKIGTRGFTNYLLHADDMIKE >gi|325481585|gb|AEXN01000009.1| GENE 14 11781 - 11861 57 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKTENQESKGRSPPFKTIKQTRFIKQ >gi|325481585|gb|AEXN01000009.1| GENE 15 12158 - 13120 915 320 aa, chain - ## HITS:1 COG:CAC0565 KEGG:ns NR:ns ## COG: CAC0565 COG0642 # Protein_GI_number: 15893855 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 72 317 251 497 499 134 41.0 2e-31 MLAIDSNIFRFNNEIHEFFVNRLDLIFFVILLLGILIIIIKEFSKLEKDYIDLCKKIDDL DENVVSFPTPYKTLEDSINRLKFKQKEIEYTLKKRENEDNDLITYLAHDLRTPLTSIIGY LSMLDEMKDLPNKQREKYIRQLLETALGLEDLINQFFEIARLNNGEFSIHKEKIDLEYFL IQLRDELYPMMKENNHKINISSEGSIFVNVDPNKMKRALENILKNAILYSYANTEIKVKI YQTYKCVILKIINKADTLEEAQIRNMFNKFTRLNLARNSKKVGSGLGLPIAKEIIELHEG KIEVESSNNEVIVIVRLKNK >gi|325481585|gb|AEXN01000009.1| GENE 16 13197 - 13880 727 227 aa, chain - ## HITS:1 COG:BH1808 KEGG:ns NR:ns ## COG: BH1808 COG0745 # Protein_GI_number: 15614371 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 4 224 5 227 231 176 43.0 4e-44 MNYSVLVVEDDESILDLIEIYLENENYIIKKATCSEEAIRYIKEEEFDLAILDIMLPDKD GYYLCKKIRESFNYPIIMLTSKDDESSKIKGLTFGADDYVTKPFLPGELVARVKAQLRRY NNYNLKTKEGTGNILTYQNVDLNIKSREVLVDGQEIDLTPIEFIILKSLLEKKSEVLGSE DLFYKIYPDEYYIKNNTVSVHIRHIREKLGEKNNIITTVWGVGYKIG >gi|325481585|gb|AEXN01000009.1| GENE 17 14305 - 14451 146 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227500017|ref|ZP_03930096.1| ## NR: gi|227500017|ref|ZP_03930096.1| hypothetical protein HMPREF0077_0731 [Anaerococcus tetradius ATCC 35098] hypothetical protein HMPREF0077_0731 [Anaerococcus tetradius ATCC 35098] # 1 48 1 48 48 64 95.0 3e-09 MEICGREERPDLINMNMILRLVRYVDYSILTVANSVVANRVIVLVTNV >gi|325481585|gb|AEXN01000009.1| GENE 18 14804 - 15076 261 90 aa, chain - ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 1 88 1 85 87 59 38.0 2e-09 MATTNLNIRTDKEIKEAAEKIYSSLGLNMTTAINMFLRASIRESGIPFDLKLNVPSDETI KAIEEGRMIAKDTNVKSYDNMDDLRKALEV >gi|325481585|gb|AEXN01000009.1| GENE 19 15157 - 15381 199 74 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 5 67 3 65 67 81 57 7e-15 MKDQIIINLDQVLKKKNMTSKELAGRIGITEANLSILKTGKAKGIRFNTLASICKELDCQ PGDLLEYDNEEYQQ >gi|325481585|gb|AEXN01000009.1| GENE 20 15384 - 15905 168 173 aa, chain - ## HITS:1 COG:no KEGG:Apre_1829 NR:ns ## KEGG: Apre_1829 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 173 1 173 173 237 97.0 2e-61 MKSFIFKIAIILSKVVRYISYLGAGFTLLGSVLTLIFKDDVIQVVESNQFNLQEVSLPFI IYSCLSALMIFIVAGFSLDKFEKILVNLEKKDYFSDLNSKYSRDILIALIILTICQIISM LVFNYLKVDNISGVFNLTIKDYLTNIILMVIAFSSMMIFNSGKSLKEDSESII >gi|325481585|gb|AEXN01000009.1| GENE 21 15928 - 16398 425 156 aa, chain - ## HITS:1 COG:no KEGG:Apre_1828 NR:ns ## KEGG: Apre_1828 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 156 1 156 156 255 92.0 4e-67 MRKRFLIMAIFLVFSIVLTSCSPNTTTEQTSSKKEEKIEIFDSNNKKIVETEEQEVLDYF GNLTGMSVANINDKNFDNYFKEIPDDAIESYHFILTSKREDKKATKIDFYIYENYPYITM EGMPMIPSSLTWELSKEDLNDLKDKVQEWKDVDDNR >gi|325481585|gb|AEXN01000009.1| GENE 22 16495 - 16629 134 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846343|ref|ZP_08169333.1| ## NR: gi|325846343|ref|ZP_08169333.1| hypothetical protein HMPREF9246_0841 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0841 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 44 11 54 54 71 97.0 2e-11 MELGLSVSDLSLLTIGLVNDMFTEKNNDDYKYKEVATQEDFDKF >gi|325481585|gb|AEXN01000009.1| GENE 23 17016 - 17672 794 218 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_0166 NR:ns ## KEGG: HMPREF9243_0166 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 218 1 218 218 298 94.0 1e-79 MEYKDIRENLEEMMNDNYKDFIKALVSIEKGVTDEKALEEVYVLYMNNDTTGLLSDDFDY MIDDMKEQGKIVENTNELEEKDDLINLVGNIAGKVENLERENANGEKFKVSNFSIVSKDD DGNKVYTNCSAYGDKTKDLDNLKQGDFVKIFGQVKTSIDNKGKEHKNVRILSSKLLKAKE QVKSQGKDKKSILGQIKSFKTDDKVKSNKKDHSKGAER >gi|325481585|gb|AEXN01000009.1| GENE 24 17716 - 25359 7181 2547 aa, chain - ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1046 2339 2 1305 1315 617 30.0 1e-176 MQVNDFKNIQEAIKYEVLQDEKEYLKLLKVIGNNQKYDFSSQLSIYNKEPEARACATFDM WKKYFGRVVMRGQKGIPILVGSDINQRISYIFDISQTTSMDRNINEVNLWQFDHENHNEA LKEIIRDSSFEASDSLNENIFSLSRIYGDEYINLALADLRIDIEDRLSFEKFMRDSISYA VANRFNTVYPMDMENLKNNFSRINTISLEQIGLVISRVSEDIIDSTIEKSKEMDRARLLT ERAGGEYNRDIENINEDRGGQNDLYRRDDRSRSRDGRVFTDGSDRGNSDEDRRENLGHDG EGSGIYGEISESDLRSSKTVLPGRERGHGELEETSRNVRGENTFEPPEGNSDSGSGLYQE RESQDDESTRIDREDDERKSREIPRTDEQLDGNSQENGNQGIRGSVEKEISQEKEADEAS FFDGKNIQNRKDYWSVEFNENHELVPDYSGQIVTKELINVLRQKDIDVKDHNQTLGENEF GEMTDDYIGYFKFYFDHYVDGEVVEHYRIDLGDGVEVNEREFSYLEEQVALSEEKLLKEE TKENIEPKFKIGDQVRYKDKDFTITDFDELSGGLKTITIRDNMEYMGGMIRGSEVIPYRN DSYLEEIFENLSQTSEKLAVKVGKEFILEDENTFDGINLIETGTKVEVNGEEIPLYKGET FEESRKIDDLLDSGNYEIYKLSEHEKQIERQVEQESFIDNHNPEIDQMMDRYNVPREAAE NLLRGKEDLKNLGYEPDRKRLSFARNYDLKNHIYSEYLTPSEKLDKNIKAIKMLKRLENE NRSPREYEQAYLADYLGWGGLADVFDEEKGGQWLEVRNILKENLTNEEYLNAKESTLTSF YTPREVMDGIYKTLTDMGFKTGNILEPSAGVGNFIGNMPSEIRSSKVYGVEKDSLSGRIA RELYPEANIQIKGFEETNFSNNFFDLVIGNVPFGDFKVNDREYNRNNFLIHDYFFAKSID KVRNGGIIAFITSSGTMDKKDESVRKYINARCEFLGAMRLPNTTFKGLAGTEVTSDIIFL KKRDSVIERDDDWIHLSTDKKGLTYNKYFVDNPQMVLGDMKEVSGRFGNTITCDEKEDEN LKDLMDLASKEISSNSKYEEVELLEDEELSLPATDDVKNFSYTIIDEEVYLRENSVLIKQ NISDKNKEKIKDYLDVMNALKDVIEKQKDDFSDEEIKESQAKLNEVYDNFSKKHGFINSL SNTRALKEDSNFPLVSSIEILDDEDNFKAKSDIFSKRTITKAKVVDHVDTSLEALVLSVS QKGYVDFEYMESITNKDRDTLIGELEGEIFLDIKDTDLINNRMPFENFDNDNPFHFSYVS ADEYLSGNIREKIGYLNSYIGEIENVIDLAPSEKKDTLLNELGKLKYQREKLQEVMPEEL TASDINVRLGATWIPQKDIEDFTFNLLKTPGYDRWNINVRFSPHTSEWNIEGKSVDSTND LANMTYGTSRVNAYKLIENALNLKDTKVFDQVINNDGSKTSVLNKKETMLASQKQELIKE EFKNWIFEDPDRRYRLEKIYNEKFNSIRNREFDGSNLTFDGMNTEIRLREHQKNAIARTL YGGNTLLAHVVGAGKTFEMVASAMESKKLGLTSKSLFVVPNHLTTQIGREFMQLYPSANI MVADKKDFQPKNRKRFIGRIATGEYDAVIIGHSQFEKIPMSKEYQVRHIQDQIDDIVSFI DENKRNRGENFTVKQLEKTKKKLLVRLEKLNDDFKKDDVITFEELGVDKLFIDEAHNYKN LFLHTKMRNVAGIGQSEAFKSSDMYMKCRYMDEMTDGKGVVFATGTPISNSMTELYTMQR YLQYDDLKARGLEHFDAWASTFGETENTFELSPEGTGYRQKTRFSKFYNLPELMSMFKEV ADIKTSDMLNLPVPEANFEVIKTKPTEEQKEILEAISERADAVRNNQVEPTEDNMLKITN DGKKLALDQRLINPLLPDDPNSKVNVCVKNIFSIWDKTKENSSTQLVFSDMSTPKGDGEF NIYDDIRNKLVNMGIPKEEIAFIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNV QNKLIALHDLDVPWRPSDLEQRSGRIVRQGNENDKVNIFRYVTENTFDSYLWQTIENKQK FISQIMTSKTPVRVAEDVDEASLSYSEIKALATGNPLIKEKMDLDNEVTKLKMLEANYKS NKYKLEDKVNKIYPQSILKTEMEIQAVKEDIANVEKLGEGDSKFTSISLGENKILDKKEA GEKLLEEIKKVKINDSKVIGKYRNLDLQVSYNFMTNTHTFKLLGKAEYFGEFSNSTDGNI TRLDNAIEKMPSRLERLNQNLENYKESLENAKVELTKPFEKADELRDKTLRLAEINKLLD MGEVEELENQSPLLEDLKRAIVDYSNYEFSESNNYEDFDKLYPDLSHIGLAYTETPDGKH SIQYEVNLEEKTWTQYVDNVAIRTESFVEEDISNSQALKDMTEAIKMSSFDDLVSVDEED LKQALGLEIDDDGNFYDPLAKDLDNDGIPDRYDNDFKDSDYFESTYDVEDNLHAREEKPS ILGQISKFKSEEEKDKNQEKSEKGQER >gi|325481585|gb|AEXN01000009.1| GENE 25 25436 - 25891 460 151 aa, chain - ## HITS:1 COG:no KEGG:Bsel_0783 NR:ns ## KEGG: Bsel_0783 # Name: not_defined # Def: hypothetical protein # Organism: B.selenitireducens # Pathway: not_defined # 1 147 1 147 151 126 48.0 2e-28 MKTKLRNVLLYIVKNYPYGDDLTKTRITKLVYLIDWEYTKKYGKQMTEISWYFDHYGPYV SDVLDEADEDKTVSIKSTFSNFGTIKYIVRPKYDKELIHYEGLDVSEIEVINEVFENTKM LSWNQFINYVYDTPPIKESRKYSHLDLTKFI >gi|325481585|gb|AEXN01000009.1| GENE 26 25881 - 26537 353 218 aa, chain - ## HITS:1 COG:no KEGG:Bsel_0782 NR:ns ## KEGG: Bsel_0782 # Name: not_defined # Def: hypothetical protein # Organism: B.selenitireducens # Pathway: not_defined # 1 204 55 254 269 84 25.0 3e-15 MIYAINEISEIKEIKEKENLKKLLEIKNKEISTLELSIEYLGQSLSGLPKDFLRHVSKYL DLSNSDRISLYVFDETKFQIIGRYSENPLYDYCNREEYPRNEGYIAKCFENSDGKPYFCR NKLPKNTQKRYFEIVSKETGMSIDFLKKLSMKSRAYFGRLVKDDNKDNVGILLIETINPD FNISPEDLNEDIEKLIIPHLKTMLEISNKLKEDESYEN >gi|325481585|gb|AEXN01000009.1| GENE 27 26790 - 27737 654 315 aa, chain - ## HITS:1 COG:CAC1222 KEGG:ns NR:ns ## COG: CAC1222 COG0270 # Protein_GI_number: 15894505 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Clostridium acetobutylicum # 4 312 7 304 314 294 49.0 2e-79 MNKVKILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYK APNEKIDLIMHGSPCQDFSRIGKKQGGVKNSGTRSSLLFETIRIINEMKDKPKWIIWENV KGVLDRNMRDSFFIYLKELENLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFSFNK LERKETRPLSEFLEKNVSELYTMTQPYMLKFLNKGIDNSFRGRLKVIKDFSYTISTKQMR VPNSGIIDIGNGKYRYLTERECLRLMGFDDSDINKLEEAHPRRKNCTSSKLYKQAGNSIV VDVLMELINSILFYK >gi|325481585|gb|AEXN01000009.1| GENE 28 27730 - 28851 1075 373 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 48 364 258 591 709 196 40.0 6e-50 DSEISLFKKQKYYTVDLFYGELKLVSDRIDRIEVAEQLLNLLEDEIVITEVEDKEISTKP DKPYDLTTLQREANKYFGYSANDTLNLAQGLYEKKLITYPRTDSRYLTNDMVNTMKELLE GLEEDFKINESNFKSIFNSSKVTDHYAIIPTISGIEKAKDLSDKESKVYNLIKNKLLASC SDNLKESSRKIRYEYDKFNFNASGKTVIDEGYTKYLKAYGKEKQENELPDIKTGDKIKLT SKNISEKFTKAPSHYNEDTLLKAMENAGVESLDKDIEVERKGLGTPATRAGIIENLIHKD LIRRDKKNLLVTEKGNRLVSIVEDKFKSAETTSEWEMKFAKISSGEVDKEDFLREIEDSI RELVDRYKNNLNE Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:26:32 2011 Seq name: gi|325481548|gb|AEXN01000010.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00033, whole genome shotgun sequence Length of sequence - 34865 bp Number of predicted genes - 35, with homology - 35 Number of transcription units - 10, operones - 7 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 1253 1230 ## COG3976 Uncharacterized protein conserved in bacteria - Prom 1327 - 1386 6.7 - Term 1768 - 1830 16.6 2 2 Tu 1 . - CDS 1849 - 2907 1192 ## COG0208 Ribonucleotide reductase, beta subunit - Prom 3056 - 3115 6.7 - Term 3164 - 3224 3.0 3 3 Tu 1 . - CDS 3264 - 5792 2913 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 5906 - 5965 11.6 - Term 5933 - 5993 10.5 4 4 Op 1 3/0.000 - CDS 5995 - 6489 424 ## COG1714 Predicted membrane protein/domain 5 4 Op 2 . - CDS 6498 - 7499 1083 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 7687 - 7746 8.1 6 5 Op 1 . - CDS 7764 - 9800 1231 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 7 5 Op 2 . - CDS 9801 - 10268 609 ## Apre_1718 transcriptional regulator, MarR family - Prom 10296 - 10355 10.5 - Term 10387 - 10420 3.1 8 6 Op 1 11/0.000 - CDS 10442 - 11281 270 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 9 6 Op 2 . - CDS 11281 - 11583 517 ## COG0526 Thiol-disulfide isomerase and thioredoxins 10 6 Op 3 . - CDS 11615 - 12211 627 ## Apre_1722 nitrogen regulatory protein P-II (GlnB, GlnK) 11 6 Op 4 . - CDS 12211 - 12732 753 ## CLI_3025 hypothetical protein 12 6 Op 5 . - CDS 12774 - 13604 826 ## Apre_1723 hypothetical protein - Prom 13624 - 13683 5.5 13 7 Op 1 . - CDS 13699 - 14685 1535 ## COG0280 Phosphotransacetylase 14 7 Op 2 . - CDS 14751 - 15221 472 ## Apre_1725 hypothetical protein 15 7 Op 3 . - CDS 15206 - 15814 506 ## Apre_1726 hypothetical protein 16 7 Op 4 25/0.000 - CDS 15801 - 16637 849 ## COG1475 Predicted transcriptional regulators 17 7 Op 5 . - CDS 16640 - 17683 1195 ## COG1192 ATPases involved in chromosome partitioning 18 7 Op 6 . - CDS 17661 - 18401 858 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) 19 7 Op 7 . - CDS 18437 - 18868 428 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA 20 7 Op 8 24/0.000 - CDS 18920 - 19549 729 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 21 7 Op 9 11/0.000 - CDS 19542 - 21440 1839 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 22 7 Op 10 4/0.000 - CDS 21430 - 22794 1571 ## COG0486 Predicted GTPase - Prom 22837 - 22896 7.3 - Term 22864 - 22898 3.1 23 8 Op 1 . - CDS 22899 - 23426 626 ## COG1847 Predicted RNA-binding protein 24 8 Op 2 . - CDS 23390 - 23743 396 ## Apre_1735 single-stranded nucleic acid binding R3H domain-containing protein 25 8 Op 3 22/0.000 - CDS 23709 - 24467 732 ## COG0706 Preprotein translocase subunit YidC - Prom 24487 - 24546 11.1 - Term 24569 - 24608 1.4 26 9 Op 1 . - CDS 24713 - 25063 345 ## COG0594 RNase P protein component 27 9 Op 2 . - CDS 25115 - 25249 198 ## PROTEIN SUPPORTED gi|227500987|ref|ZP_03931036.1| ribosomal protein L34 - Prom 25491 - 25550 8.9 + Prom 25925 - 25984 5.0 28 10 Op 1 16/0.000 + CDS 26013 - 27389 1811 ## COG0593 ATPase involved in DNA replication initiation + Prom 27467 - 27526 4.0 29 10 Op 2 . + CDS 27607 - 28734 1143 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 30 10 Op 3 . + CDS 28743 - 28952 294 ## Apre_0003 S4 domain-containing protein 31 10 Op 4 9/0.000 + CDS 28952 - 30025 964 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 32 10 Op 5 24/0.000 + CDS 30040 - 31944 2614 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 33 10 Op 6 . + CDS 31953 - 34394 2936 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 34 10 Op 7 . + CDS 34396 - 34704 485 ## COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 35 10 Op 8 . + CDS 34704 - 34863 224 ## Apre_0008 putative anti-sigma regulatory factor, serine/threonine protein kinase Predicted protein(s) >gi|325481548|gb|AEXN01000010.1| GENE 1 2 - 1253 1230 417 aa, chain - ## HITS:1 COG:CAC2762_2 KEGG:ns NR:ns ## COG: CAC2762_2 COG3976 # Protein_GI_number: 15896018 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 161 244 47 131 132 70 49.0 7e-12 MKNTFLKKALTLFIVSLASVVMIKSSIFAFEKNQRLSAIKEKNILHSKVRISKDLKDGQY EASSEGYGGLLTVRISIENGKLTDIKIISHNETEEYFKKALAVIDEILRKGSVNVDSVSG ATISSNAIKDAVAKALQKAGSKEKIKVKTKKKDRKKVEGLKDGEYLGSANGYGGILTVKV TIKNGKISAIDVISQNETPQYFRRAYAVINQILSTGSVNVDSISGATVSSNALKMAVADA IQKAGSKQQAKVQAVNNSSNANNRRGNLAGSVTIGNEDLKDGVYTGSGQGYNGPINVRVT ISNGLIKNIEILSYSDDNPYFNRARSVLSRILGKPGKSVDTVSGATYSSRGIIDAVNNAI AKAGSKNQKVKQTKPSPSKNKKSNKNQKTGNSIGIGNSNKKLKDGIYEGISEGFNGP >gi|325481548|gb|AEXN01000010.1| GENE 2 1849 - 2907 1192 352 aa, chain - ## HITS:1 COG:TP0053 KEGG:ns NR:ns ## COG: TP0053 COG0208 # Protein_GI_number: 15639047 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Treponema pallidum # 9 352 8 351 351 484 67.0 1e-136 MEKKYKEEVSKRGIFNEEGDIDLSKRRIINGNTTNLNDFNNVKYTWTNDWYRQAMNNFWI PEEINLNQDIKDYRNLSKAEKKAYDRILSFLTYLDSIQTANLPNLQTYITANEINLCLAI QTYQEAIHSQSYSYILDTICSPDERTRILYLWKEDEHLLKRNKFIGDQYNEFIKDDSEFN LMRVLIANYILEGIYFYSGFSFFYNLGRNGKMPGTVQEIRYINRDENTHLWLFRSMINDL KEERPDLFTDELKEFYLSLLKEGVEQEIAWGKYAIGDEIQGLNSQMIEDYIKYLGNLRAK GLGLGKIYEGYEEEPQSMKWVSEYSDPNQVKTDFFEGKVSAYSKSSVIEDDL >gi|325481548|gb|AEXN01000010.1| GENE 3 3264 - 5792 2913 842 aa, chain - ## HITS:1 COG:TP1008 KEGG:ns NR:ns ## COG: TP1008 COG0209 # Protein_GI_number: 15639992 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Treponema pallidum # 1 842 1 845 845 986 56.0 0 MEVKKRDGKVVDFEREKINRAIFKSFRSVDSVISEENLDKISLNIENTIKERYPKDHVVT VEEIQDLVELELIENNYYKEVKSYILYRAKHNMDRKVLTDFESYIDDDYTLSIIKDINEE YDNQRYPIESLYLKFESFTKANMTKEALLNALIKAASELTSKEAPDWEFIAARFMIHLIN LKISLSEEKYEIVDFRSKIQYLTSVGLYGAYILEAYTNKDLEELGAYLKEERNKLFTYSG LDLVAKRYLIKTFEGEYIESVQEMFMGISMHLAIGEKDKVYFAKKLYDILSQLKATMATP TMTNARKPFNQLSSCFIDTVPDTLKGIYRSITNFAQVSKHGGGMGLYFGKVRAQGSDIRG IKNVAGGVIRWIKLANDTAVAVDQLGVRQGAVACYLDIWHKDMPEFLSLRTNNGDDRMKA HDIFPAVCVPNLFWKECRDNIGGDWYMFDPHEVLVKYGKSIEDTYGEEFEEFYHKLVKDK EISKRVIAIKDLIRLLIKSWTETGTPFVFNRDAVNKANPNKHKGIIYSSNLCTEIAQNMS PSETVNEEIKTVDGETVIVNTTKPGDFVECNLASLTLGNIDVNDKKELEEVVSTIVRALD NVIDLNYYPTSYAKVTNKKYRAIGLGTSGYHHMLVKNDIKWSEEDAHLEFVDKVYEDINY FAIKASNEIAKEKGSYSCFEGSDWDNGDYFTQRGYESERWEKLKKDVHENGLRNGYLLAI APTGSTSIISGTSAGVDPIMNKYFLEEKKGAIVPRVAPGLNTKTFWLYENAYTIDQNISM RACGVRQRHIDQAQSVNVYITTEYTMRQILNIYLTAWEAGVKSLYYVRGKSLEVEDCDSC AS >gi|325481548|gb|AEXN01000010.1| GENE 4 5995 - 6489 424 164 aa, chain - ## HITS:1 COG:lin1626 KEGG:ns NR:ns ## COG: lin1626 COG1714 # Protein_GI_number: 16800694 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Listeria innocua # 15 153 22 161 178 81 38.0 8e-16 MENMEVIENNTLNNQKTISIPKFAYAGFFLRLVAFTIDSIVAYSFSNIILKIFQISPDLT FMNIELNPFIETGICLLYFFILTYLNNGQTLGKMAVGIRVISLSDEKLSFFDCLVREVFA RYIQNFIKILYLIVGFSPNKQSLADMLVDTVVIKDDVVDYLFEN >gi|325481548|gb|AEXN01000010.1| GENE 5 6498 - 7499 1083 333 aa, chain - ## HITS:1 COG:lin1627 KEGG:ns NR:ns ## COG: lin1627 COG0616 # Protein_GI_number: 16800695 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Listeria innocua # 6 333 3 337 337 223 40.0 3e-58 MKKNKSKRWIAVAIALLLFVASTIVSNRGEKQAEKKSEELKNQYFDQFNPFSATANKKTL EKGDSKNKIAVLSYEGAIGDGQVYDDFMDQLDDVYDDDSVKGVIMQVNSPGGAVYNSEQI ANKIKKIQKDKKIPVFTVMKTMAASGGYYISAPTDRIYASNETLTGSIGVIMSSTSFQGL FEKYGIKQQNITTGKMKDAGSAGKDMTDEQKKYFQDLINSSFDRFVKIVSQGRSMKEDEV RKLADGRVYDGAQAKSNGLVDKIGDLDLAIEDMKKDFKLNNAEVYQYDNDMASFSRFFSK AENLLNKNSSSDLSIIKELMEKDSPLPMYYYGK >gi|325481548|gb|AEXN01000010.1| GENE 6 7764 - 9800 1231 678 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 12 649 8 634 636 478 42 1e-134 MPSIKKGKRPLVYYWIIAIVAFLVIQQILQPIRAEGKPKEITYSQFVSMIDNGQVREVTK DDYNYTFTAVVDGDKQKFITGLWPDTDLTERLLEASKKHKNLTFTKEVETKMSPWLTLFV TSILPLLFLLLIFYMANRSLSKTMGGRGGGDFMNFGKSNAKIYMENKTGKTFADVAGQEE AKDSLNEVVDFLHGPQKYKEIGAVLPKGVLLVGPPGTGKTLLAKAVAGEANVPFFSISGS EFVEMFVGMGASKVRDLFKQAKEKAPCIVFIDEIDAIGKKRDVSGYSGNDEREQTLNQLL NEMDGFDATEGVVLLSATNRPEILDPALTRPGRFDRRVQVELPDLKGREDILKVHAKKIK RENDIDYEEIAKRTAGTSGADLANIVNEGALRAVREGRNRLTQTDLEESIETVIAGAQKK NAVISDDQKKIIAYHEVGHALVAAIQTQKTPVTKITIVPRTGGALGYTMTVDKDEKFIMT KQELFDEIVTLAGGRSAEELIFNAKTTGASNDIEKATAIARNMVTIYGMDEDFDFMQLEQ IQGRYLGGQRSMIVSNGTGDKIDQKVGKIIAQAHMRAIEILKDNLDKLHEISDFLLKEET ITGEQFMNILNKKPVESEEVNSDKKLEVNLDEKDQENSSENSTDNLKKELEDTLKENEPK DVIALGSEEKDDKDKKED >gi|325481548|gb|AEXN01000010.1| GENE 7 9801 - 10268 609 155 aa, chain - ## HITS:1 COG:no KEGG:Apre_1718 NR:ns ## KEGG: Apre_1718 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: A.prevotii # Pathway: not_defined # 3 155 4 157 159 185 70.0 4e-46 MTRHIDFFEFNNSIFSMIREISHKIDLLLQETAQELGVTTLQLKMIMTLSASKDAVSIGN LGKSIGVNGGNISNICKKLEKQGFVDRNRSDEDERVVNVKLTDKGLDAASKVSKYFDKIK PEVDEKNINANLKTIIDELGSLDNLLDEYIVRSGL >gi|325481548|gb|AEXN01000010.1| GENE 8 10442 - 11281 270 279 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 3 278 2 302 306 108 28 4e-23 MDYDLIVVGFGPAGIAAGLNASIRKKKVLIIGKKSKAIEKSPSIKNYLGFKDLEGKDLYQ RFIDHIKEYPVEIMDKKIKAVYALGDYFSVDLGDKMLTSKTCILASGVDMGKSIEGEDKF FAKGISYCATCDASLYKGKKVVLVGLNDEAIDEANFINKLAKETIFINPKNEDLKLDSGI KIINKKPKEFIGDMKASSLILEDGEKIEADGFFIIKNSSKPQSLAPSVKIENGHIKVDSN MQTNIKGLFACGDIVGRPYQINKAVGQGQIAGLNAASYK >gi|325481548|gb|AEXN01000010.1| GENE 9 11281 - 11583 517 100 aa, chain - ## HITS:1 COG:ECs4714 KEGG:ns NR:ns ## COG: ECs4714 COG0526 # Protein_GI_number: 15833968 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Escherichia coli O157:H7 # 9 89 31 115 127 85 45.0 3e-17 MKEINTSEFDTHVLENDGIVLVDFSATWCGPCKMQKPVLEQMEDKLEIYSVDVDQSPELA GRYNVNAVPSLMLFKGGVLKNTLVGFQAKEVILEEVEKLK >gi|325481548|gb|AEXN01000010.1| GENE 10 11615 - 12211 627 198 aa, chain - ## HITS:1 COG:no KEGG:Apre_1722 NR:ns ## KEGG: Apre_1722 # Name: not_defined # Def: nitrogen regulatory protein P-II (GlnB, GlnK) # Organism: A.prevotii # Pathway: not_defined # 96 197 1 103 105 113 57.0 5e-24 MKYLRIITSRSKGSRFMDQLEKHGAKSISCLLAEGSANDHILEVLGINKEKKEIVSALVN DELVKDLLYKLKEKFDKKNTSIMFTTPLDLKGEVNMEYEALYVIVNKENADKVIEISQKE GARGATVVHGRGSGIQKKSVFLNMTIEPEKDIVIMLIKKEISEKVKSSIYEAMNLEENSQ GILFSLPVSDVRGLVEQN >gi|325481548|gb|AEXN01000010.1| GENE 11 12211 - 12732 753 173 aa, chain - ## HITS:1 COG:no KEGG:CLI_3025 NR:ns ## KEGG: CLI_3025 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_F # Pathway: not_defined # 1 168 113 289 309 149 49.0 5e-35 MASVEGGFMELARVMGENYADFKLVPLIGFILGLLVVLAEPAVFVLSEQVEEVTGGSIHK SSIMKALSLGVAFAVMLAMFRIKIEGFKLWMLIVPGFLLALILSRNVPQLFVGIAFDSGG VASGPMTATFILAFCQGVAGNVADGFGVIAFVALMPVITIMIMGSFYKEAIEG >gi|325481548|gb|AEXN01000010.1| GENE 12 12774 - 13604 826 276 aa, chain - ## HITS:1 COG:no KEGG:Apre_1723 NR:ns ## KEGG: Apre_1723 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 266 15 276 288 281 68.0 2e-74 MAIIFKDEVKQNAKAVVPIAILVLILNLFRPVDNKLIGNFLLGCLGVILGLSIFLTGVDL SISKIGSFMGDFIAKSENILKVVIFGIFIGFIISVAEPDFLILANQVRSAVGLGSFLIVA IISAGVGVMISIGLYRIFKEIKLSSLMMVVYGVIFIIMLITNDLGHAIAFDASGATTGAM TTPFIIALGLGVSKLKGESKGEENSFGLVGIASAGPILAGLLMSLSIDSSNVLIEEMAHT SALYSGFKSATFAIVPISLVFFVMDKLVFKIKNKKT >gi|325481548|gb|AEXN01000010.1| GENE 13 13699 - 14685 1535 328 aa, chain - ## HITS:1 COG:lin2207 KEGG:ns NR:ns ## COG: lin2207 COG0280 # Protein_GI_number: 16801272 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Listeria innocua # 14 325 12 321 325 338 60.0 9e-93 MANDGVMELATENIRGKNRTIVFPEGDDSRVLRAAIRHNEDGLIVPILLGNKDEIQKVAD QEGVKLGDIQIINPRESELLDELVDRYVELRKGKNTREDGEYLLKKDNNYFGTMLIETGK ADGMVSGAAHPTGDTVRPALQLIKTRKGVNRVSGVMIMLGPNGEKLLFADTAINITLQSN ELAEVAVEAARTAEEFGIEPIVAMLSFSTKGSAKHELARKVEEATKLAKEMDPDLRIDGE MQFDAAISPQVARKKIPNSDVAGRAKVFIFPDLQAANIGYKIGQRLGNYEALGPILQGLN KPVNDLSRGCNEEDVYKLTILTANQVRD >gi|325481548|gb|AEXN01000010.1| GENE 14 14751 - 15221 472 156 aa, chain - ## HITS:1 COG:no KEGG:Apre_1725 NR:ns ## KEGG: Apre_1725 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 155 4 154 155 175 60.0 6e-43 MGQTIAIIILFILVIFEYSMIKSNNNKLRRQKRRYDHLLRGKNPDINMEELILQLNDQIE ESSREIRSLDQRASDTKTSSMGAVSKMAVVHFDAFDSQRGKNSFSLTLLDSYHNGIVLTN LYSQDGSNTYLKEIVNGESLQELSDREKECLEKAKL >gi|325481548|gb|AEXN01000010.1| GENE 15 15206 - 15814 506 202 aa, chain - ## HITS:1 COG:no KEGG:Apre_1726 NR:ns ## KEGG: Apre_1726 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 195 2 169 170 71 31.0 2e-11 MEKNKMIDFTVKNLIDNTRKKTANPGGGAITSLVGNLGLNLILMMAKKDYGDEKLNKKSQ KIEKKFKKYSSELEELMQEDIDKVNLLIRAFKDDNISNYDDYIIEANKAPKRTIELMIII LQDCDFILKHGKIEAISDGEIGLRLVKEAIHSSFINLTMNEENLTDEKIEKTNYKSIIKF CDKLYKDNKKIIDERIKKWDKQ >gi|325481548|gb|AEXN01000010.1| GENE 16 15801 - 16637 849 278 aa, chain - ## HITS:1 COG:CAC3729 KEGG:ns NR:ns ## COG: CAC3729 COG1475 # Protein_GI_number: 15896960 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 3 269 4 277 283 154 38.0 2e-37 MTKKSLGRGLGSLIPENNKRNKTIVRIPMEKIYTRKDQPRKNFDDKALLGLSQSIEKYGL LNPIVLRKNGIKYEIIAGERRFRASKLLGHKEIDAIIKNVDNKNIDILSIVENVQREDLT GLEEANAYNELCQNYNMTQEEVAKTVGKSRSYIANSLRLLKLDENSKRELQEGNISPSQA RTLLSIKDEDYRKKSLDDFKNKKTNIRKVEKKSRKNKSIKDDQNLDQILFEDFEEKFIDL LNSKVEIKKNKEGYRVSIDCFSIDDIENLYWSIKNGKK >gi|325481548|gb|AEXN01000010.1| GENE 17 16640 - 17683 1195 347 aa, chain - ## HITS:1 COG:lin2923 KEGG:ns NR:ns ## COG: lin2923 COG1192 # Protein_GI_number: 16801982 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Listeria innocua # 2 249 3 250 253 249 52.0 4e-66 MKTISIFNQKGGVGKTTSVVNLAVALSKLGKKVLVIDFDPQANTTTGLGLDRNQVEKSIY KMFYEEDYKDYIVKTDDGPYLIASENSLSGLEVELVSLDEEERLKMLYQIIEEIKKDFDL ILIDCPPSLGLLSLNALVASDSIIIPIQTEYYALEGVSELLKTYNTVKNSIKEDLEIEGI LLCMFDQRTNLSYEVVEEVKSYFKDKVFATMIPRNIKLAEAPSFGKSAIVYDENSKGARA YMNLARELIDNNSKGMIKKPDKSDKSETKKVSQENSEELLEKNPEDKTEDKEIVKDKSED KEIVKDKKEDKKVKDKIEKSEEADKGLVHKNKFSFNENKLLNNEKRD >gi|325481548|gb|AEXN01000010.1| GENE 18 17661 - 18401 858 246 aa, chain - ## HITS:1 COG:TM0703_2 KEGG:ns NR:ns ## COG: TM0703_2 COG1546 # Protein_GI_number: 15643466 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Thermotoga maritima # 93 239 21 175 178 90 33.0 3e-18 MFEHKLKNHLSHDSIIKSRNLKIALLGEWDMASRIDLSTKNPTISPYFNNQGGYLRITAK AKSEIEVDKLLDDKEKEVKSIFKDLLISDDSLRKEETLINLLKERGEKVSTAESVTGGFI ASSIIDIAGASEVIEEAFVTYSDRIKEKTLNVSHEILEKYGAVSHECAIEMLDGLYEHTL ADLCIISTGYAHKGEIILGLKYKYKKIIKEFNFSADRNKARLFAKNRAMDLAILMMRGKY EDNIDI >gi|325481548|gb|AEXN01000010.1| GENE 19 18437 - 18868 428 143 aa, chain - ## HITS:1 COG:CAC3586_1 KEGG:ns NR:ns ## COG: CAC3586_1 COG1058 # Protein_GI_number: 15896820 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Clostridium acetobutylicum # 1 140 1 139 245 114 44.0 4e-26 MKAQIISVGTEILLGNITDTNSKFLANKLTELGIDVFKMTTVGDNPDRLYKALKEAVENV DYVFTTGGLGPTEDDITKEIAIKVLGQEDQVIVDPRSKERLESYFAKKKKAIKINLKQAK FPKDAIILDNDRGTAPGCILKIK >gi|325481548|gb|AEXN01000010.1| GENE 20 18920 - 19549 729 209 aa, chain - ## HITS:1 COG:BH4060 KEGG:ns NR:ns ## COG: BH4060 COG0357 # Protein_GI_number: 15616622 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Bacillus halodurans # 1 209 22 237 238 179 46.0 4e-45 MDKFEKYGQMLIETNKKFNLTTIDEPDQIKIKHFEDSLTIKSYINEGMKVLDIGSGAGFP GIPLRIEKDFDLTLIDSVNKKVNFMNQVIEELDLKNTRAIHVRAEDFAKEHREEFDMVIS RAVANLSTLSEYALPFLKVGGIFIAMKGPKAEEEYEDAKNALKILGGELINIDSMDLHGN TRKNILIKKVRSTKKKYPRGKNLPKKNPL >gi|325481548|gb|AEXN01000010.1| GENE 21 19542 - 21440 1839 632 aa, chain - ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 6 625 3 619 626 732 58.0 0 MESNKKYIDESYDVVVIGAGHAGCEAALSIARLGFKTLVLTTSMESVADMPCNPNIGGTG KGHIVREIDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKIKYHQEMKKTLESQ ENLDLFEQEVDKINVEDGRVKSVETVQGAIFPTKACVVCTGTYLNGKILMGDFQKTSGPH GLSAATHLSDSLEDLGFTLRRFKTGTPARVDRKSLDLTKTEIQKGDENIVAFSFLNEGKD FSDKKQEACYLTYTTEKTKEIIMENLERSPMYGGLVKGIGPRYCPSIEDKMVRFPDRDIH QVFIEPESLSTDEMYVQGVSSTLPQEVQKEFYKTIEGLEDCKIIRPAYGIEYDCLDSTNL KRSLESKEIENLFFAGQINGSSGYEEAAGQGLVAGINAALKLRGDDPLILDRSDAYIGVL IDDLVTKGTNEPYRMMTSRCEYRLTMRQDNADLRLTEKAHEIGLVTDERYQKMIEKRKNI EDEINRLQKVMVGPSQENNKIMEEIGSSPLKTGYSLFDLIKRPELTYEKLEILDPDRPSL PKFQQIQVQTEIKYQGYIKKQMADIGKFKKLENKKLDHDTDYTKIKGLKKESAEKLNKIK PDSIGQASRISGVSPADINVLLIRLKAGDLNG >gi|325481548|gb|AEXN01000010.1| GENE 22 21430 - 22794 1571 454 aa, chain - ## HITS:1 COG:FN0006 KEGG:ns NR:ns ## COG: FN0006 COG0486 # Protein_GI_number: 19703358 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Fusobacterium nucleatum # 5 454 5 455 455 365 49.0 1e-100 MSESTIAAISTPQGSGGISIVRMSGDKSFDIIKKIFKPINERALDRDKDNRMMRYGHIEK DGRIYDEVMINFMKGPNTYTREDICEINCHGSMISVRDILNLLLDLGCELADRGEFTKRA FLNGRIDLSQAEAVLDIINSTNEISQKQGLKQLSGLLREKIEEIRKIELEALSRIEYSIN FTEDGEDLPLDDIVEYMDRANDEITKLLSTANKGKLVKDGIETTIIGKPNVGKSSLLNVL LNENRAIVTDIPGTTRDSITEYINLGNLTLKINDTAGIRETHDEVEKIGVQRSKELAKGA DLIIAIFDRSREIDEEDKIILDLLKGKNAIIILNKIDLDSKISKEDFDKDFTIIETSMVS RDGIDKLEGAIFDIFDSKELNKESLMITNLRHERLLNSSKEKLQSSLKDIKSFVPIDCVE VDLRSSYDDLGLIIGETVSDEIMDKVFREFCVGK >gi|325481548|gb|AEXN01000010.1| GENE 23 22899 - 23426 626 175 aa, chain - ## HITS:1 COG:lin2985 KEGG:ns NR:ns ## COG: lin2985 COG1847 # Protein_GI_number: 16802043 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Listeria innocua # 61 172 89 201 206 70 30.0 1e-12 MEPKLEDEKESLDLEVKNEEDKEDEVSLYYKAKDLLEKILIDMHFEDVKVIGNLEDNIIK LEAKIDPKDTGIVIGKGGKTLDAIETVIRKIIKARSNKVKLNIDINNYKKRRDEKIIMLA DQACKKVLKTRKSWNLKYMNSYERRLAHEQISKYDKLDSHSEGVEPKRFVVVDYK >gi|325481548|gb|AEXN01000010.1| GENE 24 23390 - 23743 396 117 aa, chain - ## HITS:1 COG:no KEGG:Apre_1735 NR:ns ## KEGG: Apre_1735 # Name: not_defined # Def: single-stranded nucleic acid binding R3H domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 74 1 74 276 65 66.0 8e-10 MKRSIVKTAKTKDEAIKEALKEINKSIDEVEIDVLEEESTGFLGLIGQKDAVVKVSYQED INEGIDSLIKEIEEDTKKDLEKEFDVKKYQKKFKKKIEKILKKVSPWNLNWKMKKSL >gi|325481548|gb|AEXN01000010.1| GENE 25 23709 - 24467 732 252 aa, chain - ## HITS:1 COG:RSc0004 KEGG:ns NR:ns ## COG: RSc0004 COG0706 # Protein_GI_number: 17544723 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Ralstonia solanacearum # 2 218 342 529 553 100 31.0 3e-21 MLNFIAQLLGSLMKLIYDSLVNNFTEPSNMSFYAISIILMTVLVSLITIPMTMNQQKQAA KSGEIQPKIEEIKKKYAYDPQIMQQKMQQLYKEEGVGPGLSSCLVMIFQLLILLSLYRVI QSPDKYIFQGSMHQVKDNFLWVPTLSKADPLFYGLPLLTSISQLAVQVFTMKTSPQSQAQ NTPGMGSMNNMLMIMPIIYYFVFRNLPAGLPLYWTTSSLARLIILGGQYLIGLNKRDKEE ENEKINSKNSKN >gi|325481548|gb|AEXN01000010.1| GENE 26 24713 - 25063 345 116 aa, chain - ## HITS:1 COG:SA2502 KEGG:ns NR:ns ## COG: SA2502 COG0594 # Protein_GI_number: 15928298 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Staphylococcus aureus N315 # 1 106 1 107 115 63 41.0 9e-11 MEKQFSLRKNVDFERVYKKSKHYYNRDFTVFIKNNGVNRPRFGFSISKKIGKANQRNKLK RRLRAIVYDNYRNINNVDIIIIPKKHTTDFTYQKLKSSLGHVLSKAFKDKKIRYVK >gi|325481548|gb|AEXN01000010.1| GENE 27 25115 - 25249 198 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227500987|ref|ZP_03931036.1| ribosomal protein L34 [Anaerococcus tetradius ATCC 35098] # 1 44 1 44 44 80 84 1e-14 MKRTYQPNRRKRKKDHGFRKRMSTPAGRRVLKSRRQKGRKKLSA >gi|325481548|gb|AEXN01000010.1| GENE 28 26013 - 27389 1811 458 aa, chain + ## HITS:1 COG:lin0001 KEGG:ns NR:ns ## COG: lin0001 COG0593 # Protein_GI_number: 16799080 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Listeria innocua # 2 457 3 445 451 324 42.0 2e-88 MNLEYITNELKEKMKMNVPDLQQYETWIGILKPLNKYDNTIYLEIPKNDTKFIFDQIWVP QLQAILNDINKRESTSYKVEIVAKDGPNYEDILTLGRNVDDNGQLRLNNVNRYPKPLLEK NNIFENFVQGKSNQLALAASQSVAENMANYKVSRVYNPLFIYGSSGLGKTHLMQAIAHEI LKKRDDCYVMYLSSEKFTNEMISAVRNNTNEEFRKKYRSVDMLLIDDIQFIANKTGTQEE FFHTFEDLYNQGKQIVISSDRPPKEIKHLEERLVSRFGWGIIVDISKPDFETRVAILQKK QDELGAVVDYKILEYIAENIETNIRDLEGALATSIACAKSNNRSYVSLEDARLGVSSRVH KDKKQISAEDIQKKVSDRYHVKLTDLRGKSRKKEIVMPRQIAMYLCRYLLSISLVSLANE FNRDHTTIMHGHDKIEAMIEEDQDFRQEIEELIKEIKS >gi|325481548|gb|AEXN01000010.1| GENE 29 27607 - 28734 1143 375 aa, chain + ## HITS:1 COG:CAC0002 KEGG:ns NR:ns ## COG: CAC0002 COG0592 # Protein_GI_number: 15893300 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Clostridium acetobutylicum # 6 374 1 364 366 206 36.0 6e-53 MLGANMKIEIQQKDLSNKISIALKAVSRKTNIQIHELIYFEAKNDSLTLTSSDGEISILT KVSCNVIEEGEMAINANIISNIVRKLPDELIKIEVVDSKIKIKCNGSKFNILAFDYYEKK DLKVPDVDYLEIQNDKLKRSISQTEFATSLDETKLALTGILFELMDGYLNFVALDGYRVA LKKLKLSYPSSMDKSRLIIPRKSISEWTRIIDDEKITKIYKDDKDIIFESGDTTMYCKVI DKNYIDYTNIISDISTTSLVVDRQELINSLERAQLLNNTQRANLIKINIEDDKCLIESNS EIGDLKEIIQIQKEGEDVKIAFNARYLIEGVKACDTKSIKMNLKSSLNPCLIYPNESKYE DEEFTYLALPVRLAE >gi|325481548|gb|AEXN01000010.1| GENE 30 28743 - 28952 294 69 aa, chain + ## HITS:1 COG:no KEGG:Apre_0003 NR:ns ## KEGG: Apre_0003 # Name: not_defined # Def: S4 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 69 1 68 68 70 62.0 3e-11 MEKIEFECEIILAKDLLKATDIAQSGGEAKHLIKEYGILVNGEEYFQAGKKLYKGDLVEF NNQFEIRLV >gi|325481548|gb|AEXN01000010.1| GENE 31 28952 - 30025 964 357 aa, chain + ## HITS:1 COG:SP2227 KEGG:ns NR:ns ## COG: SP2227 COG1195 # Protein_GI_number: 15902031 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Streptococcus pneumoniae TIGR4 # 1 354 1 358 365 204 37.0 3e-52 MWIQSLRLSKFRNYLSQNIEFNENINIFLGDNAQGKTNLLESIYYLANAKSFKSFRDKDL IMFNEKEMALDGLIRKNESFKNVKIRVNENKKEIFVNDIKYDKNKDLKSLFKLVLFTPED LTIIKDGPNFRRNLIDDIIISVNFSYKALKKDFDKVLSQRNKVLKNQRSKYFKEELMAFD QQIIRLNYKIYRYREKYISLINTYAKKNHSNLTENKEDLSIIYRPDIVAKDIEEYREKFS KNKSYDLKYYRTTSGSQRDEIDIIINGKDSKKFGSQGQQRSAILNIKLANVNLIENTSQD KAIILFDDVFSELDEKRSNFLLENLGGFQTIITATNTKSLDRVDKSKIRKIKDGHIK >gi|325481548|gb|AEXN01000010.1| GENE 32 30040 - 31944 2614 634 aa, chain + ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 3 634 5 637 637 793 63.0 0 MDNTQYNASNIRVLKGLEPVRLRPGMYIGSTSERGLHHLVYEVVDNSVDEALAGRCDYIK ISIDENNIVTVEDDGSGIPIEKHPQTGKSTLETVLTVLHAGGKFDDKAYKVSGGLHGVGV SVVNALSEYLIAEVKREGHIYRMTFERGKPTSDLEIIGDTKETGTKISFKADPEIFDVTV YNKNTLENRFREMAFLNKGVRLIFEDKRDESEVEFKYDGGIKEFVKYLNRNKTPIFKEIP YFEGRQESTEVEISFQYTDGYSENILTFANNIYTVEGGTHLSGFRSALTRSVNDYARKYN LLKENEDNLQGDDAREGITAIISVKISNPQFEGQTKGKLGNSEVRGAVDAFFSEHMGSFL EENPKIAKTIIQKALASRRAREAARKARDLTRKRSILDSTTLPGKLADCQSQDIGENEIF IVEGNSAGGSAKGGRDNRIQAILPLRGKIMNVEKANLDRILNYEEIKSMITAFGTGIGQE FDLSKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMKPLVDEGHIYIAQPPLYKISSGKK ERYCYTDKELEDIVKEWKVDNYKISRYKGLGEMNAEQLWETTMDPENRVLLQVYEKEDSQ MSTDATFSMLMGEKVEPRREFIEENAQYVENLDV >gi|325481548|gb|AEXN01000010.1| GENE 33 31953 - 34394 2936 813 aa, chain + ## HITS:1 COG:BH0007 KEGG:ns NR:ns ## COG: BH0007 COG0188 # Protein_GI_number: 15612570 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Bacillus halodurans # 1 798 1 797 833 859 54.0 0 MTEENYQNIIEVELEEQMRSAYLEYSMSVIVSRALPDVRDGLKPVHRRILYGMEGLGLDP NKPTRKSARVVGEVMGKFHPHGDSAIYDALVRLAQDFSTRYPLANGQGNFGSIDGDDAAA MRYTEVKMSKIAKEMLRDINKDTVDFMPNFDEEEKEPTVLPSRFPNLLVNGSNGIAVGMA TNMAPHNLGDSIDACIAYMNNPEISVKELADIIKGPDFPTGAQILGKAGIKKAYKTGRGK LKLRAVARIEPFKKNRERIIVTEIPYQVNKANLIKKIAEYVKDKKLEGISDIRDESDRKG MRIVIEVKRDANANIVLNNLYKQTQLETTFGIINLALVDGVPKILDLKELIKYYVKHQKD VVRRRTKFDLDKAQKRKHIVEGLIIAIDNIDEIIKIIRSSYDNDQIKKIFNEKFGLTDPQ SQAILDMQLKRLSGLEIEKLQAEDKELAEKIEYFTSILNDEEKLISVIEEEILEIKEKYA DDRRTKIVPDEGEFDIEELIEKEDVLISLTHDGYIKRLPINTYKVQNRGGKGISAGNTKE NDFIQKILTTNTHESLLCFTNLGRVYSLKCYEIPEASRQSRGQAIINLISLSSDEKITDI MELSNLNEKSQLVFQTENGKIKKTDAELFTNIQRNGIIAISLENGDRLVSIRQIDKPCDI IVTTKKGMAIKFASSDIRSMGRNARGVRAIRLGEDDKVVSMNIVEDEVYLVVVTANGFGK KTSFNNFNNQNRGGKGVRCHKITEKTKDVVATLPANLDDDIMMVSLKGDMIRISTRDIST TGRNTLGVKLKNLENTEDFIVSVTKYYEETSEE >gi|325481548|gb|AEXN01000010.1| GENE 34 34396 - 34704 485 102 aa, chain + ## HITS:1 COG:SA1871 KEGG:ns NR:ns ## COG: SA1871 COG1366 # Protein_GI_number: 15927641 # Func_class: T Signal transduction mechanisms # Function: Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) # Organism: Staphylococcus aureus N315 # 15 102 16 103 108 58 35.0 3e-09 MFKANIEEKNDHLLVKLIGDLDVYSKEDFAKFCDKSLKDKNENLIVDLEKLDYIDSTGLG MFINIYKDQKEKDKTIKIINAKENIKKLFKITDISDLFEMEE >gi|325481548|gb|AEXN01000010.1| GENE 35 34704 - 34863 224 53 aa, chain + ## HITS:1 COG:no KEGG:Apre_0008 NR:ns ## KEGG: Apre_0008 # Name: not_defined # Def: putative anti-sigma regulatory factor, serine/threonine protein kinase # Organism: A.prevotii # Pathway: not_defined # 1 53 1 53 111 70 69.0 3e-11 MDTISLTIPPKTLYLKSMRLLAASLASDMGFDIEEVEDIRVVVSEAINYKMSD Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:29:00 2011 Seq name: gi|325481212|gb|AEXN01000011.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00017, whole genome shotgun sequence Length of sequence - 321874 bp Number of predicted genes - 345, with homology - 338 Number of transcription units - 119, operones - 68 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 308 145 ## COG3344 Retron-type reverse transcriptase + Term 344 - 394 -0.3 - Term 232 - 284 1.4 2 2 Tu 1 . - CDS 386 - 1351 829 ## gi|325846488|ref|ZP_08169403.1| conserved domain protein - Prom 1587 - 1646 6.5 + Prom 1898 - 1957 5.1 3 3 Op 1 . + CDS 2072 - 2245 387 ## gi|325846787|ref|ZP_08169702.1| hypothetical protein HMPREF9246_0443 + Prom 2257 - 2316 2.8 4 3 Op 2 2/0.031 + CDS 2339 - 2548 351 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 5 3 Op 3 . + CDS 2636 - 4009 921 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 4051 - 4092 1.6 + Prom 4218 - 4277 8.5 6 4 Op 1 16/0.000 + CDS 4335 - 4859 558 ## COG2371 Urease accessory protein UreE 7 4 Op 2 . + CDS 4852 - 5097 120 ## COG0830 Urease accessory protein UreF + Prom 5114 - 5173 2.0 8 5 Op 1 17/0.000 + CDS 5205 - 5555 363 ## COG0830 Urease accessory protein UreF 9 5 Op 2 . + CDS 5564 - 6175 1015 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 10 5 Op 3 . + CDS 6175 - 6435 119 ## Apre_0724 urease accessory protein UreD 11 5 Op 4 8/0.000 + CDS 6432 - 6989 591 ## COG0829 Urease accessory protein UreH 12 5 Op 5 13/0.000 + CDS 6980 - 7282 420 ## COG0831 Urea amidohydrolase (urease) gamma subunit 13 5 Op 6 17/0.000 + CDS 7292 - 7675 578 ## COG0832 Urea amidohydrolase (urease) beta subunit 14 5 Op 7 . + CDS 7676 - 9397 2172 ## COG0804 Urea amidohydrolase (urease) alpha subunit + Term 9481 - 9527 3.6 - Term 9887 - 9931 0.3 15 6 Tu 1 . - CDS 9958 - 10950 855 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 11010 - 11069 7.9 16 7 Op 1 35/0.000 + CDS 11027 - 12865 232 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 17 7 Op 2 . + CDS 12849 - 14570 1553 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 18 7 Op 3 . + CDS 14581 - 15162 742 ## SPJ_1335 hypothetical protein 19 7 Op 4 34/0.000 + CDS 15162 - 15851 411 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 20 7 Op 5 . + CDS 15845 - 17209 212 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 17291 - 17320 1.2 + Prom 17340 - 17399 7.1 21 8 Op 1 . + CDS 17435 - 17812 191 ## COG2832 Uncharacterized protein conserved in bacteria 22 8 Op 2 8/0.000 + CDS 17802 - 19505 728 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components 23 8 Op 3 . + CDS 19502 - 21160 182 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 21301 - 21345 -0.4 + Prom 21218 - 21277 4.9 24 9 Tu 1 . + CDS 21377 - 21790 291 ## CDR20291_1808 putative sigma factor + Prom 21831 - 21890 12.0 25 10 Op 1 . + CDS 21937 - 22155 247 ## COG4604 ABC-type enterochelin transport system, ATPase component 26 10 Op 2 . + CDS 22137 - 22271 207 ## gi|325846674|ref|ZP_08169589.1| mutacin ABC transporter, ATP-binding protein MutF domain protein 27 10 Op 3 . + CDS 22346 - 23341 273 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase + Prom 23401 - 23460 9.3 28 11 Tu 1 . + CDS 23520 - 23741 162 ## + Term 23855 - 23922 7.1 29 12 Op 1 1/0.062 - CDS 23824 - 24183 134 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase 30 12 Op 2 . - CDS 24231 - 24455 85 ## COG2826 Transposase and inactivated derivatives, IS30 family - Prom 24627 - 24686 3.2 31 13 Tu 1 . - CDS 24694 - 24771 74 ## - Prom 24920 - 24979 6.6 + Prom 24759 - 24818 8.7 32 14 Op 1 40/0.000 + CDS 24912 - 25562 711 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 33 14 Op 2 4/0.000 + CDS 25562 - 26422 537 ## COG0642 Signal transduction histidine kinase 34 14 Op 3 36/0.000 + CDS 26475 - 27155 336 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Prom 27162 - 27221 7.3 35 14 Op 4 . + CDS 27259 - 29580 1595 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 30135 - 30194 7.4 36 15 Op 1 . + CDS 30232 - 30549 375 ## Apre_0590 hypothetical protein 37 15 Op 2 . + CDS 30559 - 30765 196 ## COG1476 Predicted transcriptional regulators + Term 30788 - 30837 7.6 + Prom 31336 - 31395 7.5 38 16 Tu 1 . + CDS 31467 - 31853 414 ## FMG_1299 hypothetical protein + Prom 31855 - 31914 5.6 39 17 Tu 1 . + CDS 31985 - 32938 844 ## COG4129 Predicted membrane protein + Term 33043 - 33088 -0.9 + Prom 32956 - 33015 9.7 40 18 Op 1 . + CDS 33158 - 33331 104 ## gi|325846740|ref|ZP_08169655.1| hypothetical protein HMPREF9246_0478 + Prom 33383 - 33442 6.3 41 18 Op 2 . + CDS 33466 - 33804 213 ## gi|212696476|ref|ZP_03304604.1| hypothetical protein ANHYDRO_01014 + Term 33853 - 33902 1.2 + Prom 33863 - 33922 11.7 42 19 Op 1 . + CDS 34012 - 34221 266 ## COG1476 Predicted transcriptional regulators 43 19 Op 2 . + CDS 34211 - 34603 491 ## HMPREF0424_0516 hypothetical protein + Prom 34615 - 34674 10.9 44 20 Op 1 . + CDS 34767 - 35099 223 ## gi|325846589|ref|ZP_08169504.1| conserved domain protein 45 20 Op 2 . + CDS 35105 - 35302 154 ## COG1476 Predicted transcriptional regulators + Term 35355 - 35391 2.5 + Prom 35305 - 35364 9.4 46 21 Op 1 . + CDS 35471 - 35899 472 ## HMPREF0868_0425 ArsR family transcriptional regulator 47 21 Op 2 . + CDS 35850 - 35990 57 ## 48 21 Op 3 . + CDS 35983 - 37206 1164 ## COG0477 Permeases of the major facilitator superfamily 49 21 Op 4 . + CDS 37249 - 37728 371 ## Lebu_2179 GCN5-related N-acetyltransferase + Prom 37889 - 37948 9.2 50 22 Tu 1 . + CDS 37977 - 39002 1434 ## COG2855 Predicted membrane protein + Term 39007 - 39050 8.7 + Prom 39052 - 39111 8.4 51 23 Op 1 12/0.000 + CDS 39138 - 39887 328 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 52 23 Op 2 . + CDS 39871 - 41382 1522 ## COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 53 23 Op 3 . + CDS 41400 - 42167 500 ## Apre_1118 NERD domain-containing protein + Term 42171 - 42205 4.6 + Prom 42175 - 42234 5.2 54 24 Op 1 . + CDS 42258 - 42683 305 ## EUBREC_0506 hypothetical protein 55 24 Op 2 . + CDS 42692 - 43108 355 ## Elen_1414 hypothetical protein 56 24 Op 3 . + CDS 43111 - 43794 459 ## Olsu_0661 hypothetical protein + Prom 43860 - 43919 10.3 57 25 Tu 1 . + CDS 43954 - 45048 1718 ## COG0371 Glycerol dehydrogenase and related enzymes + Prom 45085 - 45144 13.5 58 26 Tu 1 . + CDS 45185 - 45661 553 ## Apre_1097 thioesterase superfamily protein + Term 45760 - 45803 5.1 + Prom 45676 - 45735 8.8 59 27 Tu 1 2/0.031 + CDS 45816 - 47129 1168 ## COG0534 Na+-driven multidrug efflux pump + Prom 47141 - 47200 13.5 60 28 Op 1 36/0.000 + CDS 47228 - 47923 314 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 61 28 Op 2 10/0.000 + CDS 47920 - 49116 844 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 62 28 Op 3 . + CDS 49176 - 50162 770 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 50212 - 50249 1.4 + Prom 50292 - 50351 10.0 63 29 Tu 1 . + CDS 50382 - 51932 1860 ## COG1757 Na+/H+ antiporter + Term 51935 - 51985 7.1 + Prom 51942 - 52001 11.2 64 30 Op 1 . + CDS 52090 - 52263 253 ## SSA_1453 hypothetical protein 65 30 Op 2 . + CDS 52187 - 52402 104 ## FMG_1300 hypothetical protein + Term 52403 - 52460 15.1 - Term 52391 - 52447 11.1 66 31 Op 1 . - CDS 52465 - 53652 1246 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 53677 - 53736 7.2 67 31 Op 2 35/0.000 - CDS 53745 - 55421 200 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 68 31 Op 3 . - CDS 55501 - 57243 1412 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 57363 - 57422 6.2 + Prom 56994 - 57053 7.7 69 32 Tu 1 . + CDS 57176 - 57388 137 ## + Term 57552 - 57590 -0.9 70 33 Tu 1 . - CDS 57424 - 58971 1936 ## COG2509 Uncharacterized FAD-dependent dehydrogenases + Prom 58975 - 59034 11.7 71 34 Tu 1 . + CDS 59054 - 59515 503 ## COG0456 Acetyltransferases 72 35 Tu 1 . + CDS 59912 - 61255 1394 ## COG1114 Branched-chain amino acid permeases + Prom 61288 - 61347 7.3 73 36 Tu 1 . + CDS 61405 - 62817 687 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 63049 - 63116 6.3 74 37 Tu 1 . + CDS 63150 - 64769 1624 ## COG1757 Na+/H+ antiporter + Prom 64790 - 64849 9.1 75 38 Tu 1 . + CDS 64938 - 66350 778 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 + Term 66356 - 66395 4.5 + Prom 66372 - 66431 8.3 76 39 Tu 1 . + CDS 66451 - 67407 1263 ## COG0039 Malate/lactate dehydrogenases + Term 67409 - 67460 -0.6 + Prom 67437 - 67496 8.2 77 40 Tu 1 . + CDS 67517 - 67732 281 ## gi|256545338|ref|ZP_05472702.1| modification methylase ScrFIA (cytosine-specificmethyltransferase ScrFIA) + Term 67734 - 67770 3.0 + Prom 67757 - 67816 14.9 78 41 Tu 1 . + CDS 67955 - 69250 2002 ## COG0422 Thiamine biosynthesis protein ThiC + Term 69254 - 69297 9.6 - Term 69240 - 69287 2.8 79 42 Tu 1 . - CDS 69288 - 69953 493 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 70123 - 70182 13.6 - Term 70138 - 70177 6.4 80 43 Op 1 . - CDS 70191 - 72074 1972 ## COG2217 Cation transport ATPase 81 43 Op 2 . - CDS 72083 - 72301 313 ## EUBELI_01434 hypothetical protein - Prom 72348 - 72407 9.0 + Prom 72362 - 72421 9.2 82 44 Tu 1 . + CDS 72447 - 72782 348 ## COG0640 Predicted transcriptional regulators + Term 72788 - 72824 5.1 - Term 72776 - 72812 5.1 83 45 Op 1 . - CDS 72817 - 73071 175 ## COG2321 Predicted metalloprotease - Prom 73101 - 73160 3.1 84 45 Op 2 . - CDS 73164 - 73427 249 ## COG2321 Predicted metalloprotease + Prom 73696 - 73755 8.1 85 46 Tu 1 . + CDS 73799 - 74626 939 ## COG0708 Exonuclease III + Prom 74867 - 74926 10.6 86 47 Tu 1 . + CDS 74971 - 75870 1245 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Prom 75872 - 75931 7.3 87 48 Op 1 16/0.000 + CDS 75975 - 77168 1317 ## COG4175 ABC-type proline/glycine betaine transport system, ATPase component 88 48 Op 2 14/0.000 + CDS 77161 - 78003 1046 ## COG4176 ABC-type proline/glycine betaine transport system, permease component 89 48 Op 3 . + CDS 78016 - 78903 1186 ## COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components + Term 78977 - 79016 1.5 + Prom 79024 - 79083 11.7 90 49 Op 1 . + CDS 79118 - 79924 691 ## Apre_0991 hypothetical protein 91 49 Op 2 . + CDS 79935 - 81209 1172 ## COG0038 Chloride channel protein EriC + Term 81211 - 81263 1.1 + Prom 81242 - 81301 13.4 92 50 Op 1 . + CDS 81365 - 82729 1039 ## COG1114 Branched-chain amino acid permeases 93 50 Op 2 1/0.062 + CDS 82795 - 83136 345 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 94 50 Op 3 . + CDS 83121 - 83390 260 ## PROTEIN SUPPORTED gi|228003993|ref|ZP_04050977.1| SSU ribosomal protein S21P + Term 83472 - 83515 -0.5 - Term 83460 - 83503 3.3 95 51 Tu 1 . - CDS 83524 - 84549 828 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 84680 - 84739 8.9 + Prom 84642 - 84701 13.7 96 52 Op 1 16/0.000 + CDS 84902 - 85981 1143 ## COG1985 Pyrimidine reductase, riboflavin biosynthesis 97 52 Op 2 15/0.000 + CDS 85962 - 86585 760 ## COG0307 Riboflavin synthase alpha chain 98 52 Op 3 18/0.000 + CDS 86591 - 87805 1433 ## COG0807 GTP cyclohydrolase II 99 52 Op 4 . + CDS 87806 - 88264 713 ## COG0054 Riboflavin synthase beta-chain 100 52 Op 5 . + CDS 88261 - 88866 620 ## COG0546 Predicted phosphatases - Term 88837 - 88879 8.2 101 53 Op 1 . - CDS 88920 - 89465 450 ## Apre_1455 hypothetical protein 102 53 Op 2 . - CDS 89470 - 89904 677 ## COG0716 Flavodoxins - Prom 90023 - 90082 16.9 + Prom 90163 - 90222 12.2 103 54 Op 1 . + CDS 90359 - 91213 1143 ## COG2376 Dihydroxyacetone kinase 104 54 Op 2 . + CDS 91243 - 91344 111 ## 105 54 Op 3 9/0.000 + CDS 91346 - 91945 865 ## COG2376 Dihydroxyacetone kinase 106 54 Op 4 . + CDS 91938 - 92336 597 ## COG3412 Uncharacterized protein conserved in bacteria + Term 92374 - 92435 3.2 107 55 Op 1 1/0.062 - CDS 92328 - 93146 785 ## COG0313 Predicted methyltransferases 108 55 Op 2 . - CDS 93136 - 93837 543 ## COG4123 Predicted O-methyltransferase - Prom 93864 - 93923 6.0 + Prom 93871 - 93930 8.9 109 56 Op 1 . + CDS 93950 - 95290 1751 ## COG1109 Phosphomannomutase 110 56 Op 2 . + CDS 95294 - 95614 374 ## Apre_1151 hypothetical protein 111 56 Op 3 . + CDS 95694 - 95843 245 ## PROTEIN SUPPORTED gi|227499796|ref|ZP_03929891.1| ribosomal protein L33 112 56 Op 4 . + CDS 95858 - 96040 318 ## gi|212696287|ref|ZP_03304415.1| hypothetical protein ANHYDRO_00824 113 56 Op 5 45/0.000 + CDS 96048 - 96641 902 ## COG0250 Transcription antiterminator 114 56 Op 6 55/0.000 + CDS 96704 - 97138 480 ## PROTEIN SUPPORTED gi|227981920|ref|ZP_04029177.1| LSU ribosomal protein L11P 115 56 Op 7 43/0.000 + CDS 97176 - 97886 961 ## PROTEIN SUPPORTED gi|227499792|ref|ZP_03929887.1| ribosomal protein L1 + Term 98009 - 98065 15.2 + Prom 97920 - 97979 3.8 116 57 Op 1 47/0.000 + CDS 98089 - 98637 603 ## PROTEIN SUPPORTED gi|228003977|ref|ZP_04050961.1| LSU ribosomal protein L10P 117 57 Op 2 . + CDS 98673 - 99053 381 ## PROTEIN SUPPORTED gi|227372936|ref|ZP_03856413.1| LSU ribosomal protein L12P + Term 99069 - 99096 -0.8 + Prom 99077 - 99136 7.6 118 58 Tu 1 . + CDS 99166 - 99615 473 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 99620 - 99662 2.4 - Term 99607 - 99649 2.4 119 59 Tu 1 . - CDS 99658 - 100368 426 ## COG3503 Predicted membrane protein - Prom 100393 - 100452 7.0 + Prom 100351 - 100410 11.7 120 60 Tu 1 . + CDS 100454 - 101728 1181 ## COG0285 Folylpolyglutamate synthase + Term 101834 - 101886 -0.5 + Prom 101773 - 101832 9.5 121 61 Op 1 1/0.062 + CDS 101979 - 103505 1889 ## COG1288 Predicted membrane protein 122 61 Op 2 . + CDS 103519 - 104730 1545 ## COG2195 Di- and tripeptidases 123 61 Op 3 . + CDS 104730 - 106130 1822 ## COG2195 Di- and tripeptidases + Term 106133 - 106185 12.9 + Prom 106132 - 106191 5.1 124 62 Tu 1 . + CDS 106212 - 106466 243 ## CCC13826_1068 addiction module antitoxin + Term 106586 - 106637 -0.6 + Prom 107115 - 107174 8.5 125 63 Op 1 7/0.000 + CDS 107247 - 108380 1236 ## COG0448 ADP-glucose pyrophosphorylase 126 63 Op 2 17/0.000 + CDS 108382 - 109497 978 ## COG0448 ADP-glucose pyrophosphorylase 127 63 Op 3 10/0.000 + CDS 109508 - 110938 1708 ## COG0297 Glycogen synthase 128 63 Op 4 . + CDS 110941 - 113181 1736 ## COG0058 Glucan phosphorylase 129 63 Op 5 . + CDS 113187 - 115073 1774 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 130 63 Op 6 . + CDS 115063 - 116754 2249 ## COG1109 Phosphomannomutase + Term 116765 - 116818 7.0 + Prom 116768 - 116827 8.6 131 64 Op 1 . + CDS 116905 - 117408 413 ## COG1716 FOG: FHA domain 132 64 Op 2 . + CDS 117401 - 117820 250 ## Apre_0875 cell cycle protein 133 64 Op 3 19/0.000 + CDS 117796 - 118671 657 ## COG0772 Bacterial cell division membrane protein 134 64 Op 4 . + CDS 118652 - 120157 1820 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 120166 - 120206 5.1 - Term 120154 - 120194 4.3 135 65 Tu 1 . - CDS 120203 - 120988 478 ## COG0061 Predicted sugar kinase - Prom 121234 - 121293 13.2 + Prom 120963 - 121022 9.3 136 66 Tu 1 . + CDS 121055 - 121849 241 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit + Prom 122093 - 122152 11.8 137 67 Op 1 . + CDS 122202 - 122777 1059 ## Apre_0879 hypothetical protein 138 67 Op 2 . + CDS 122788 - 123231 631 ## Apre_0880 hypothetical protein + Term 123232 - 123258 0.3 139 67 Op 3 . + CDS 123279 - 124289 1378 ## COG1609 Transcriptional regulators 140 67 Op 4 25/0.000 + CDS 124342 - 124602 500 ## COG1925 Phosphotransferase system, HPr-related proteins + Term 124608 - 124647 3.0 141 67 Op 5 . + CDS 124663 - 126372 1991 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 142 67 Op 6 . + CDS 126384 - 127292 788 ## Apre_0884 hypothetical protein + Term 127293 - 127343 11.6 + Prom 127328 - 127387 5.6 143 68 Tu 1 . + CDS 127410 - 128261 740 ## COG1284 Uncharacterized conserved protein + Prom 128358 - 128417 6.0 144 69 Op 1 . + CDS 128474 - 129082 499 ## COG2996 Uncharacterized protein conserved in bacteria 145 69 Op 2 . + CDS 129084 - 129830 920 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 146 69 Op 3 . + CDS 129842 - 129970 204 ## gi|212696250|ref|ZP_03304378.1| hypothetical protein ANHYDRO_00786 + Term 130060 - 130101 -0.9 + Prom 129999 - 130058 4.9 147 70 Op 1 . + CDS 130153 - 131241 596 ## COG2195 Di- and tripeptidases 148 70 Op 2 . + CDS 131244 - 131600 525 ## Apre_0889 hypothetical protein 149 70 Op 3 . + CDS 131593 - 132549 764 ## COG1242 Predicted Fe-S oxidoreductase 150 70 Op 4 . + CDS 132546 - 132974 592 ## Apre_0891 hypothetical protein + Term 132982 - 133010 2.3 151 70 Op 5 . + CDS 133011 - 133550 389 ## Apre_0892 hypothetical protein 152 70 Op 6 . + CDS 133553 - 134509 848 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 153 70 Op 7 . + CDS 134490 - 136121 659 ## PROTEIN SUPPORTED gi|39938628|ref|NP_950394.1| ribosomal protein L13 154 70 Op 8 . + CDS 136114 - 137016 417 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 155 70 Op 9 40/0.000 + CDS 137006 - 137701 665 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 156 70 Op 10 . + CDS 137764 - 139137 1186 ## COG0642 Signal transduction histidine kinase 157 70 Op 11 . + CDS 139124 - 139552 202 ## Apre_0897 hypothetical protein + Prom 139555 - 139614 3.0 158 71 Op 1 . + CDS 139836 - 140594 633 ## Apre_0897 hypothetical protein 159 71 Op 2 7/0.000 + CDS 140650 - 141234 232 ## PROTEIN SUPPORTED gi|162456259|ref|YP_001618626.1| putative ribosomal protein 160 71 Op 3 . + CDS 141236 - 141733 388 ## COG0622 Predicted phosphoesterase 161 71 Op 4 . + CDS 141721 - 142071 358 ## gi|212696234|ref|ZP_03304362.1| hypothetical protein ANHYDRO_00770 162 71 Op 5 . + CDS 142058 - 142801 750 ## COG0560 Phosphoserine phosphatase + Prom 142912 - 142971 12.2 163 72 Op 1 . + CDS 142998 - 143705 625 ## Apre_0902 hypothetical protein 164 72 Op 2 14/0.000 + CDS 143746 - 144240 619 ## COG0817 Holliday junction resolvasome, endonuclease subunit 165 72 Op 3 . + CDS 144240 - 144833 553 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 166 72 Op 4 . + CDS 144843 - 144968 247 ## Apre_0905 Holliday junction DNA helicase RuvB 167 72 Op 5 4/0.000 + CDS 145016 - 145855 1137 ## COG2255 Holliday junction resolvasome, helicase subunit 168 72 Op 6 17/0.000 + CDS 145852 - 146874 1056 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 169 72 Op 7 . + CDS 146883 - 148007 1232 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 170 72 Op 8 . + CDS 147991 - 148266 332 ## Apre_0908 YajC family protein + Term 148269 - 148317 8.1 - Term 148256 - 148303 4.1 171 73 Tu 1 . - CDS 148311 - 149693 1039 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 149852 - 149911 16.8 + Prom 149710 - 149769 12.9 172 74 Op 1 . + CDS 149862 - 151592 2297 ## COG0608 Single-stranded DNA-specific exonuclease 173 74 Op 2 7/0.000 + CDS 151601 - 153781 2204 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 174 74 Op 3 1/0.062 + CDS 153781 - 154230 496 ## COG1490 D-Tyr-tRNAtyr deacylase 175 74 Op 4 . + CDS 154230 - 154835 671 ## COG0491 Zn-dependent hydrolases, including glyoxylases 176 74 Op 5 . + CDS 154844 - 156601 2070 ## COG0173 Aspartyl-tRNA synthetase 177 74 Op 6 . + CDS 156614 - 157027 390 ## Apre_0914 positive regulator of sigma E, RseC/MucC + Term 157028 - 157072 10.2 178 75 Op 1 2/0.031 + CDS 157090 - 158406 1306 ## COG1160 Predicted GTPases 179 75 Op 2 1/0.062 + CDS 158403 - 158981 515 ## COG0344 Predicted membrane protein 180 75 Op 3 . + CDS 158991 - 159971 1209 ## COG0240 Glycerol-3-phosphate dehydrogenase 181 75 Op 4 14/0.000 + CDS 159984 - 160658 753 ## COG0325 Predicted enzyme with a TIM-barrel fold 182 75 Op 5 . + CDS 160648 - 161226 825 ## COG1799 Uncharacterized protein conserved in bacteria 183 75 Op 6 . + CDS 161250 - 162017 707 ## PROTEIN SUPPORTED gi|227484957|ref|ZP_03915273.1| ribosomal protein S4e 184 75 Op 7 . + CDS 162014 - 162481 496 ## COG0597 Lipoprotein signal peptidase 185 75 Op 8 . + CDS 162459 - 163142 775 ## COG0692 Uracil DNA glycosylase - Term 162977 - 163020 3.1 186 76 Tu 1 . - CDS 163137 - 164048 748 ## COG3359 Predicted exonuclease - Prom 164086 - 164145 7.4 + Prom 164042 - 164101 5.9 187 77 Op 1 2/0.031 + CDS 164122 - 164592 509 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes + Prom 164601 - 164660 3.9 188 77 Op 2 7/0.000 + CDS 164688 - 165239 342 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 189 77 Op 3 . + CDS 165239 - 166405 999 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase 190 77 Op 4 . + CDS 166505 - 166816 386 ## PROTEIN SUPPORTED gi|227484963|ref|ZP_03915279.1| ribosomal protein L21 191 77 Op 5 . + CDS 166842 - 167126 253 ## PROTEIN SUPPORTED gi|228002494|ref|ZP_04049488.1| predicted ribosomal protein 192 77 Op 6 14/0.000 + CDS 167128 - 167421 433 ## PROTEIN SUPPORTED gi|227499558|ref|ZP_03929665.1| ribosomal protein L27 + Term 167432 - 167461 2.1 193 77 Op 7 1/0.062 + CDS 167472 - 168755 1800 ## COG0536 Predicted GTPase 194 77 Op 8 7/0.000 + CDS 168764 - 169051 208 ## PROTEIN SUPPORTED gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 195 77 Op 9 9/0.000 + CDS 169051 - 169644 466 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 196 77 Op 10 6/0.000 + CDS 169637 - 170197 693 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 197 77 Op 11 . + CDS 170190 - 170501 412 ## COG0799 Uncharacterized homolog of plant Iojap protein 198 77 Op 12 . + CDS 170525 - 171151 833 ## COG1555 DNA uptake protein and related DNA-binding proteins 199 77 Op 13 . + CDS 171161 - 171322 217 ## Apre_0935 transcriptional regulator, BadM/Rrf2 family + Prom 171332 - 171391 2.7 200 78 Op 1 . + CDS 171418 - 171564 135 ## gi|212696195|ref|ZP_03304323.1| hypothetical protein ANHYDRO_00731 201 78 Op 2 4/0.000 + CDS 171578 - 174190 3327 ## COG0013 Alanyl-tRNA synthetase 202 78 Op 3 . + CDS 174200 - 174457 345 ## COG4472 Uncharacterized protein conserved in bacteria 203 78 Op 4 . + CDS 174450 - 174566 133 ## gi|256545147|ref|ZP_05472513.1| Holliday junction resolvase 204 78 Op 5 . + CDS 174638 - 174868 153 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 205 78 Op 6 . + CDS 174849 - 175103 382 ## gi|212696191|ref|ZP_03304319.1| hypothetical protein ANHYDRO_00727 206 78 Op 7 1/0.062 + CDS 175093 - 175551 463 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 207 78 Op 8 . + CDS 175535 - 177211 2090 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 208 78 Op 9 4/0.000 + CDS 177201 - 177836 535 ## COG4122 Predicted O-methyltransferase 209 78 Op 10 . + CDS 177826 - 179055 1388 ## COG0826 Collagenase and related proteases + Term 179064 - 179104 7.1 - Term 179051 - 179091 7.1 210 79 Tu 1 . - CDS 179099 - 179335 497 ## Apre_0944 hypothetical protein - Prom 179398 - 179457 9.9 + Prom 179381 - 179440 9.6 211 80 Op 1 . + CDS 179507 - 179941 534 ## COG0756 dUTPase 212 80 Op 2 . + CDS 179941 - 180486 446 ## Apre_0947 hypothetical protein + Term 180487 - 180517 -0.9 + Prom 180700 - 180759 10.1 213 81 Op 1 6/0.000 + CDS 180936 - 183545 2659 ## COG0249 Mismatch repair ATPase (MutS family) 214 81 Op 2 12/0.000 + CDS 183545 - 185347 1645 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 215 81 Op 3 . + CDS 185337 - 186290 852 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 216 81 Op 4 . + CDS 186280 - 187575 1194 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance + Term 187579 - 187612 3.1 217 82 Op 1 12/0.000 - CDS 187598 - 187816 105 ## COG0582 Integrase 218 82 Op 2 . - CDS 187813 - 188589 700 ## COG0582 Integrase - Prom 188725 - 188784 11.2 - Term 188931 - 188968 1.3 219 83 Op 1 . - CDS 188980 - 191235 2135 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 220 83 Op 2 . - CDS 191297 - 192349 1457 ## gi|325846478|ref|ZP_08169393.1| putative lipoprotein - Prom 192384 - 192443 7.2 - Term 192475 - 192502 0.1 221 84 Op 1 . - CDS 192505 - 194043 1618 ## COG1418 Predicted HD superfamily hydrolase - Prom 194077 - 194136 9.5 222 84 Op 2 35/0.000 - CDS 194138 - 195868 226 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 223 84 Op 3 . - CDS 195855 - 197378 216 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 197586 - 197645 7.7 - Term 197584 - 197624 -0.9 224 85 Op 1 6/0.000 - CDS 197669 - 198196 515 ## COG1045 Serine acetyltransferase 225 85 Op 2 . - CDS 198198 - 199109 802 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 199186 - 199245 8.8 - Term 199212 - 199244 4.0 226 86 Op 1 38/0.000 - CDS 199255 - 199923 337 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts 227 86 Op 2 . - CDS 199937 - 200251 246 ## PROTEIN SUPPORTED gi|194553338|ref|YP_002088365.1| 30S ribosomal protein S2 228 86 Op 3 . - CDS 200221 - 200709 654 ## PROTEIN SUPPORTED gi|227499526|ref|ZP_03929633.1| ribosomal protein S2 - Prom 200745 - 200804 3.3 229 87 Op 1 . - CDS 200847 - 201953 787 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 230 87 Op 2 5/0.000 - CDS 201963 - 204341 1775 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 231 87 Op 3 . - CDS 204351 - 205523 1340 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 232 87 Op 4 . - CDS 205516 - 205704 291 ## Apre_0961 DNA-directed RNA polymerase, omega subunit 233 87 Op 5 . - CDS 205707 - 206303 616 ## COG0194 Guanylate kinase - Prom 206553 - 206612 8.2 + Prom 206320 - 206379 9.5 234 88 Tu 1 . + CDS 206403 - 208151 1800 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP + Term 208164 - 208195 2.4 - Term 208142 - 208189 6.1 235 89 Op 1 . - CDS 208207 - 208488 401 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 208508 - 208567 5.7 236 89 Op 2 . - CDS 208577 - 209497 663 ## Apre_0965 hypothetical protein 237 89 Op 3 1/0.062 - CDS 209442 - 210479 1357 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 238 89 Op 4 7/0.000 - CDS 210479 - 213970 3271 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 239 89 Op 5 1/0.062 - CDS 213963 - 214547 620 ## COG0193 Peptidyl-tRNA hydrolase 240 89 Op 6 . - CDS 214551 - 216926 2462 ## COG0462 Phosphoribosylpyrophosphate synthetase 241 89 Op 7 . - CDS 216936 - 217655 944 ## COG0813 Purine-nucleoside phosphorylase - Prom 217679 - 217738 6.7 - Term 217708 - 217738 1.1 242 90 Op 1 . - CDS 217746 - 219740 2288 ## COG0021 Transketolase 243 90 Op 2 . - CDS 219740 - 220183 682 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 220323 - 220382 9.4 + Prom 220258 - 220317 8.9 244 91 Tu 1 . + CDS 220349 - 221740 1570 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 221899 - 221932 -0.8 - Term 221602 - 221640 -0.2 245 92 Op 1 . - CDS 221770 - 222636 572 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 246 92 Op 2 . - CDS 222636 - 222980 527 ## COG2337 Growth inhibitor 247 92 Op 3 . - CDS 222970 - 223503 404 ## COG0787 Alanine racemase - Prom 223569 - 223628 4.6 - Term 223571 - 223614 1.1 248 93 Op 1 1/0.062 - CDS 223646 - 224071 505 ## COG0787 Alanine racemase 249 93 Op 2 . - CDS 224073 - 225260 1203 ## COG0063 Predicted sugar kinase 250 93 Op 3 . - CDS 225257 - 226375 978 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases - Term 226376 - 226417 -0.5 251 93 Op 4 . - CDS 226435 - 226644 129 ## 252 93 Op 5 21/0.000 - CDS 226566 - 227987 1533 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 253 93 Op 6 . - CDS 227977 - 229386 1621 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 254 93 Op 7 . - CDS 229396 - 229674 415 ## Apre_0980 glutamyl-tRNA(Gln) amidotransferase, C subunit 255 93 Op 8 5/0.000 - CDS 229675 - 231681 1917 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 256 93 Op 9 1/0.062 - CDS 231683 - 233872 2039 ## COG0210 Superfamily I DNA and RNA helicases - Prom 233928 - 233987 10.7 - Term 233967 - 234021 9.1 257 94 Op 1 . - CDS 234025 - 234342 520 ## COG4496 Uncharacterized protein conserved in bacteria 258 94 Op 2 . - CDS 234352 - 236001 2018 ## COG2759 Formyltetrahydrofolate synthetase - Prom 236037 - 236096 8.1 259 95 Op 1 10/0.000 - CDS 236104 - 236754 731 ## COG3442 Predicted glutamine amidotransferase 260 95 Op 2 . - CDS 236751 - 238082 1179 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 238106 - 238165 7.0 - Term 238147 - 238179 -0.4 261 95 Op 3 . - CDS 238181 - 238885 765 ## COG4193 Beta- N-acetylglucosaminidase - Prom 238905 - 238964 6.8 262 96 Op 1 1/0.062 - CDS 238966 - 239535 904 ## COG0461 Orotate phosphoribosyltransferase 263 96 Op 2 . - CDS 239578 - 240039 509 ## COG0167 Dihydroorotate dehydrogenase - Prom 240073 - 240132 1.8 264 97 Op 1 13/0.000 - CDS 240162 - 240443 389 ## COG0167 Dihydroorotate dehydrogenase 265 97 Op 2 1/0.062 - CDS 240443 - 241051 679 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Prom 241077 - 241136 7.5 266 98 Tu 1 1/0.062 - CDS 241145 - 242011 1088 ## COG0284 Orotidine-5'-phosphate decarboxylase - Prom 242054 - 242113 6.4 267 99 Op 1 19/0.000 - CDS 242115 - 242543 515 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 268 99 Op 2 . - CDS 242536 - 243465 1052 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 269 99 Op 3 . - CDS 243523 - 244056 646 ## Apre_0779 adenylate cyclase 270 99 Op 4 . - CDS 244056 - 244736 652 ## COG1768 Predicted phosphohydrolase 271 99 Op 5 . - CDS 244733 - 246640 1647 ## Apre_0777 hypothetical protein 272 99 Op 6 . - CDS 246633 - 247679 673 ## COG0420 DNA repair exonuclease 273 99 Op 7 . - CDS 247661 - 248230 742 ## COG0406 Fructose-2,6-bisphosphatase 274 99 Op 8 10/0.000 - CDS 248283 - 249374 1013 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 275 99 Op 9 36/0.000 - CDS 249421 - 251784 2036 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 276 99 Op 10 . - CDS 251786 - 252487 331 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 277 99 Op 11 10/0.000 - CDS 252492 - 252935 467 ## COG0691 tmRNA-binding protein 278 99 Op 12 . - CDS 252937 - 255039 1438 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Term 255060 - 255101 2.2 279 99 Op 13 . - CDS 255117 - 255344 350 ## Apre_0769 preprotein translocase, SecG subunit - Prom 255370 - 255429 9.5 280 100 Op 1 . - CDS 255454 - 256749 2089 ## COG0148 Enolase 281 100 Op 2 13/0.000 - CDS 256771 - 257523 1086 ## COG0149 Triosephosphate isomerase 282 100 Op 3 26/0.000 - CDS 257533 - 258729 1762 ## COG0126 3-phosphoglycerate kinase - Term 258735 - 258766 1.7 283 100 Op 4 . - CDS 258777 - 259784 1473 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 284 100 Op 5 . - CDS 259859 - 260785 569 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 285 100 Op 6 . - CDS 260799 - 261257 594 ## COG0219 Predicted rRNA methylase (SpoU class) 286 100 Op 7 . - CDS 261250 - 261927 632 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 262018 - 262077 5.5 287 101 Tu 1 . - CDS 262079 - 262744 596 ## COG0177 Predicted EndoIII-related endonuclease - Prom 262783 - 262842 8.1 + Prom 262744 - 262803 5.7 288 102 Tu 1 . + CDS 262823 - 263974 926 ## COG0772 Bacterial cell division membrane protein - Term 263950 - 264005 9.2 289 103 Op 1 . - CDS 264010 - 264546 753 ## COG4475 Uncharacterized protein conserved in bacteria 290 103 Op 2 16/0.000 - CDS 264606 - 265235 642 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 291 103 Op 3 16/0.000 - CDS 265228 - 266601 1716 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 292 103 Op 4 . - CDS 266598 - 268349 2157 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 293 103 Op 5 . - CDS 268333 - 268953 750 ## Apre_1012 H+transporting two-sector ATPase E subunit 294 103 Op 6 . - CDS 268968 - 269204 280 ## gi|212696099|ref|ZP_03304227.1| hypothetical protein ANHYDRO_00635 295 103 Op 7 . - CDS 269206 - 269631 734 ## Apre_1014 H+transporting two-sector ATPase C subunit 296 103 Op 8 . - CDS 269642 - 271057 1626 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 297 103 Op 9 . - CDS 271075 - 271947 1127 ## Apre_1016 hypothetical protein 298 103 Op 10 . - CDS 271952 - 272929 693 ## Apre_1017 hypothetical protein 299 103 Op 11 . - CDS 272950 - 274302 624 ## PROTEIN SUPPORTED gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 - Term 274313 - 274344 -0.6 300 103 Op 12 1/0.062 - CDS 274373 - 276451 2516 ## PROTEIN SUPPORTED gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 301 103 Op 13 3/0.031 - CDS 276453 - 277043 685 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 302 103 Op 14 1/0.062 - CDS 277033 - 277683 268 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 303 103 Op 15 . - CDS 277676 - 278899 1328 ## COG2081 Predicted flavoproteins 304 103 Op 16 12/0.000 - CDS 278905 - 279600 676 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 305 103 Op 17 21/0.000 - CDS 279587 - 280126 610 ## COG1386 Predicted transcriptional regulator containing the HTH domain 306 103 Op 18 . - CDS 280201 - 280833 572 ## COG1354 Uncharacterized conserved protein 307 103 Op 19 . - CDS 280823 - 281362 676 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 308 103 Op 20 8/0.000 - CDS 281364 - 283055 1647 ## COG0497 ATPase involved in DNA repair 309 103 Op 21 1/0.062 - CDS 283056 - 283508 591 ## COG1438 Arginine repressor 310 103 Op 22 . - CDS 283505 - 284344 874 ## COG0142 Geranylgeranyl pyrophosphate synthase 311 103 Op 23 . - CDS 284337 - 284519 259 ## gi|325846495|ref|ZP_08169410.1| hypothetical protein HMPREF9246_0748 312 103 Op 24 1/0.062 - CDS 284512 - 285693 1121 ## COG1570 Exonuclease VII, large subunit 313 103 Op 25 . - CDS 285694 - 286083 319 ## COG0781 Transcription termination factor 314 103 Op 26 . - CDS 286083 - 286397 473 ## gi|212696077|ref|ZP_03304205.1| hypothetical protein ANHYDRO_00613 315 103 Op 27 . - CDS 286408 - 286965 866 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 286988 - 287047 9.8 + Prom 286986 - 287045 8.5 316 104 Op 1 1/0.062 + CDS 287105 - 287587 214 ## COG1323 Predicted nucleotidyltransferase 317 104 Op 2 . + CDS 287494 - 288282 658 ## COG1323 Predicted nucleotidyltransferase + Term 288366 - 288421 2.1 - Term 288222 - 288257 -1.0 318 105 Op 1 3/0.031 - CDS 288292 - 288774 694 ## COG3599 Cell division initiation protein 319 105 Op 2 14/0.000 - CDS 288774 - 289265 361 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 320 105 Op 3 1/0.062 - CDS 289243 - 289806 282 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 321 105 Op 4 4/0.000 - CDS 289803 - 291782 1530 ## COG1200 RecG-like helicase 322 105 Op 5 9/0.000 - CDS 291788 - 293359 1821 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 323 105 Op 6 . - CDS 293367 - 293720 480 ## COG1302 Uncharacterized protein conserved in bacteria - Prom 293747 - 293806 9.2 - Term 293829 - 293858 1.4 324 106 Tu 1 . - CDS 293884 - 297414 4578 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 297458 - 297517 6.6 325 107 Op 1 . - CDS 297519 - 298451 1081 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 326 107 Op 2 . - CDS 298462 - 300309 1757 ## COG0322 Nuclease subunit of the excinuclease complex 327 107 Op 3 . - CDS 300309 - 302078 2130 ## COG0006 Xaa-Pro aminopeptidase - Prom 302154 - 302213 8.1 + Prom 302114 - 302173 11.8 328 108 Op 1 1/0.062 + CDS 302207 - 303304 1482 ## COG0012 Predicted GTPase, probable translation factor 329 108 Op 2 . + CDS 303312 - 303917 630 ## COG1435 Thymidine kinase + Term 304068 - 304114 1.4 - Term 304173 - 304225 5.1 330 109 Tu 1 . - CDS 304238 - 305419 1908 ## COG0183 Acetyl-CoA acetyltransferase - Prom 305548 - 305607 15.5 331 110 Tu 1 . - CDS 305629 - 306933 1089 ## COG1114 Branched-chain amino acid permeases - Prom 307050 - 307109 10.1 - Term 307117 - 307159 1.2 332 111 Op 1 . - CDS 307196 - 307996 1034 ## COG0024 Methionine aminopeptidase 333 111 Op 2 . - CDS 308012 - 308809 968 ## Apre_1049 hypothetical protein - Prom 308894 - 308953 10.9 + Prom 308829 - 308888 9.4 334 112 Tu 1 . + CDS 308917 - 310719 1217 ## COG0210 Superfamily I DNA and RNA helicases - Term 310701 - 310734 4.5 335 113 Op 1 . - CDS 310737 - 311879 1088 ## COG1160 Predicted GTPases 336 113 Op 2 . - CDS 311876 - 313300 1744 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 313363 - 313422 5.8 - Term 313311 - 313341 1.1 337 114 Op 1 23/0.000 - CDS 313484 - 314083 514 ## COG0353 Recombinational DNA repair protein (RecF pathway) 338 114 Op 2 30/0.000 - CDS 314083 - 314418 194 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 339 114 Op 3 . - CDS 314430 - 316172 1907 ## COG2812 DNA polymerase III, gamma/tau subunits - Prom 316310 - 316369 80.3 + TRNA 316279 - 316369 64.2 # Ser GGA 0 0 + Prom 316602 - 316661 8.7 340 115 Tu 1 . + CDS 316708 - 317175 538 ## COG0517 FOG: CBS domain + Term 317206 - 317251 6.1 - Term 317156 - 317194 3.0 341 116 Tu 1 . - CDS 317195 - 318835 1242 ## COG0296 1,4-alpha-glucan branching enzyme - Prom 318857 - 318916 9.2 + Prom 318725 - 318784 7.9 342 117 Op 1 . + CDS 318994 - 319092 97 ## + Term 319127 - 319164 -0.4 + Prom 319104 - 319163 4.9 343 117 Op 2 . + CDS 319218 - 319838 516 ## COG2207 AraC-type DNA-binding domain-containing proteins + Term 319839 - 319900 16.2 - Term 319823 - 319894 15.4 344 118 Tu 1 . - CDS 319905 - 320390 463 ## Apre_1138 hypothetical protein - Prom 320434 - 320493 4.7 345 119 Tu 1 . - CDS 320530 - 321801 1140 ## COG1306 Uncharacterized conserved protein Predicted protein(s) >gi|325481212|gb|AEXN01000011.1| GENE 1 3 - 308 145 101 aa, chain + ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 1 98 373 470 470 108 56.0 3e-24 GWIQYFKLANMRKHLQILDEWLRRRIRMCAWKGWKKVKTKFKNLVKLGTAKYQAWQWANT RKSYWRIAKSPILSRALNNKRIAERGYISLVSYYNKVQIKR >gi|325481212|gb|AEXN01000011.1| GENE 2 386 - 1351 829 321 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846488|ref|ZP_08169403.1| ## NR: gi|325846488|ref|ZP_08169403.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 321 1 321 321 621 100.0 1e-176 MSRNKNSLQFELFKRASEGLKGNTTRKQYKYACKKFASWCKEQGIKQIEKVDKDLIQKYS NHLQEDHFKFSAGTIHTYLAPICKACGVNMRDINKPRRKSNTITKGRQEAENPFGKLQET SPEFKRLITLQKAVGIRRNELENLKREDFIKGEYGIYYVHVRKGKGGKETFQMILPKDVP IVKNIFEEVPTGHNVFSKDEMNNKINLHALRREHANDVYQFFENIILTVNGFARSLRERL IKMFERGNYDLYKANPQKYEAKLKRFIDDMNDTPYELRGENKKRAIQNGKPVIYNRLALM AVSVLALSHWRLDVTVVNYIV >gi|325481212|gb|AEXN01000011.1| GENE 3 2072 - 2245 387 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325846787|ref|ZP_08169702.1| ## NR: gi|325846787|ref|ZP_08169702.1| hypothetical protein HMPREF9246_0443 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0443 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 57 1 57 57 68 100.0 2e-10 MADELDGLARLLQEFIEKYADQTDFKSLDMPPEILESNLDFDKKNDENNNEDLNPTN >gi|325481212|gb|AEXN01000011.1| GENE 4 2339 - 2548 351 69 aa, chain + ## HITS:1 COG:SP1040 KEGG:ns NR:ns ## COG: SP1040 COG1961 # Protein_GI_number: 15900911 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Streptococcus pneumoniae TIGR4 # 2 69 4 71 559 70 57.0 1e-12 MKKKRAYVYTRVSTSMQIDGYSLDAQEERIKQYAKAYDIEIVDVYKDAGKSGTSIIGRNN FITMLDDIK >gi|325481212|gb|AEXN01000011.1| GENE 5 2636 - 4009 921 457 aa, chain + ## HITS:1 COG:SP1040 KEGG:ns NR:ns ## COG: SP1040 COG1961 # Protein_GI_number: 15900911 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Streptococcus pneumoniae TIGR4 # 1 455 102 557 559 476 55.0 1e-134 MEEHGVYLVSVDDGLDSSKDAGKLVITILSAVAEMERENIIAQTMEVRKQKAREGKWNGG FAPIGYKLQDGELIINEDEAKAIKMIFDLYTNSDMGANGVAKYLASLDIRKPIRQNGKSL YFSASLIRQILDNPVYNGKIAYGRRKTKKNKITGKISQEKADNYIISKGIHEAIIDDELW ELTQKKRKSQAKKYEKINRGNDEKTYLLSSLIKCPVCGAGLYGNKSRKRKNNGEHYKDYY YYSCKHRQLMNGYKCNFSKQIKADAIDSEVATIITKIISNPSFAKKLEEKINIQIDTDEI DKIIDKHMAKERQLLGTKASLINQIDSLDFEDKHYERKFEDLNLRLDAIYDQLDYVELQI SDSRKRKEAILEEKITSDNIYKILINFHKLYSVLSDVDKKRLFNQLIEKIEIYGEKNESG RWVKSLTFKLTLIDEDINLSLDNDSSVESVVLMSKAD >gi|325481212|gb|AEXN01000011.1| GENE 6 4335 - 4859 558 174 aa, chain + ## HITS:1 COG:HP0070 KEGG:ns NR:ns ## COG: HP0070 COG2371 # Protein_GI_number: 15644700 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Helicobacter pylori 26695 # 1 155 1 154 170 80 30.0 2e-15 MIIEKIIGNVFDINEENLIINWLNMPYDHAHKKIQRFEYEGLDLGLKLSEEDRQRGLKHG DIIYREANVIYAINIEELECLKLSIDDAKFFVNLAYIIGNRHAKLYWSEDGESLITPYEK TLEDMLKTVEGIKIDKVMAKLLPKNNLMAILPQGQVVDHHSHHHDHNHDHHHHE >gi|325481212|gb|AEXN01000011.1| GENE 7 4852 - 5097 120 81 aa, chain + ## HITS:1 COG:HP0069 KEGG:ns NR:ns ## COG: HP0069 COG0830 # Protein_GI_number: 15644699 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Helicobacter pylori 26695 # 2 70 25 93 254 57 39.0 8e-09 MNRKKYEEELILLQLNDSQFPIGSYSHSYGLENYILKNLIKDSKDIKKYLINYLKTSFYY NDLLAVYLAYNYFIEGKKMSF >gi|325481212|gb|AEXN01000011.1| GENE 8 5205 - 5555 363 116 aa, chain + ## HITS:1 COG:HP0069 KEGG:ns NR:ns ## COG: HP0069 COG0830 # Protein_GI_number: 15644699 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Helicobacter pylori 26695 # 21 116 159 254 254 75 41.0 3e-14 MSEQYYDYLDYHKKNDIIIHHSVAYALITASLDIDLTASLLSFAFNMAQNLVITAVKTIP ISQFDGQKILYEIYDLIIDLVTKIDKLDEEYYFTSYPGVEVASMQHEVLYSRLYMS >gi|325481212|gb|AEXN01000011.1| GENE 9 5564 - 6175 1015 203 aa, chain + ## HITS:1 COG:HI0536 KEGG:ns NR:ns ## COG: HI0536 COG0378 # Protein_GI_number: 16272480 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Haemophilus influenzae # 2 203 17 218 225 262 63.0 3e-70 MDYVKIGVAGPVGCGKTHLIEKLVEEFKKDYKVAVVTNDIYTEEDANYLKDQGILERDRI RGVETGGCPHTAIRDDVSMNLEACEDLVRNFKDIEIIFIESGGDNLSATFSPDLADATIF VIDVAAGGDIPRKGGPGILRSDLLIINKKDLAHYVGVDLDAMRKDTLAQRGDRPFIFTNI KNGDGLNEVYDWIRKQVLLEDLK >gi|325481212|gb|AEXN01000011.1| GENE 10 6175 - 6435 119 86 aa, chain + ## HITS:1 COG:no KEGG:Apre_0724 NR:ns ## KEGG: Apre_0724 # Name: not_defined # Def: urease accessory protein UreD # Organism: A.prevotii # Pathway: not_defined # 1 70 1 70 271 139 98.0 5e-32 MKKTYARASRLYLEFENKDDTTILKDIYNSPPFLVMHTFKYGNFTKAMIMSSSPGILEGD RQEERFYAKKIARSCFLLNHMKKFIR >gi|325481212|gb|AEXN01000011.1| GENE 11 6432 - 6989 591 185 aa, chain + ## HITS:1 COG:HP0067 KEGG:ns NR:ns ## COG: HP0067 COG0829 # Protein_GI_number: 15644697 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Helicobacter pylori 26695 # 3 172 89 253 265 87 28.0 1e-17 MNEDSFASRRVEIRGEEKSDFIFKLLPMILYKDADFREEIKVDLEKDARLIFSNCFVSGR IGRGESFEFKSYKTNLDINLDSKLIYTEKNLIRPREQNINELGLMEGYDHFLSMVAINFS NEDNIGEIRKIIEKNSQKRGLKGGASLSFRNDIQIRILGKMGQDLIECEKEIIDYLIEKG GRICI >gi|325481212|gb|AEXN01000011.1| GENE 12 6980 - 7282 420 100 aa, chain + ## HITS:1 COG:Cgl0084 KEGG:ns NR:ns ## COG: Cgl0084 COG0831 # Protein_GI_number: 19551334 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Corynebacterium glutamicum # 1 99 1 99 100 133 68.0 8e-32 MHLVPKDIERLMIFTAGEVARKRKERGLKLNYPEAVALISAELYEMARDGKTVSDLMQEG RKILTRDDVMEGVPEMIKDVQIEATFPDGTKLVTVHQPIV >gi|325481212|gb|AEXN01000011.1| GENE 13 7292 - 7675 578 127 aa, chain + ## HITS:1 COG:HP0073_2 KEGG:ns NR:ns ## COG: HP0073_2 COG0832 # Protein_GI_number: 15644703 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Helicobacter pylori 26695 # 1 124 4 127 136 129 51.0 2e-30 MIPGEIFYKDEDLILNEDFESIEIKVTNTGDRAVQIGSHFHFFEVNRFLKFDRSMAFGKK LDIPAGNAIRFEPGQTHRVRLVDIGGNGRVIGFNGLTNGVAHDIKKDEAMKNLVQKGYAN INSDGEE >gi|325481212|gb|AEXN01000011.1| GENE 14 7676 - 9397 2172 573 aa, chain + ## HITS:1 COG:HI0539 KEGG:ns NR:ns ## COG: HI0539 COG0804 # Protein_GI_number: 16272483 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Haemophilus influenzae # 1 573 1 572 572 734 65.0 0 MSFKISREKYGSMYGPTTGDKVRLADTNIIIEIEKDYAIYGDESIFGGGKTVRDGMNQSS TASYASGTCDTVITNAIILDYTGIYKADIGIRDGIITGIGKSGNPDMNDNVNPGLVIGAS TEIISGENKIVTAGAIDTHVHFISADQANTALAGGTTTLIGGGTGPADGTNATTCTPGPN HLEAMLKSVEGYPVNVGLLGKGNCSSKEPLYEQIKAGACGLKIHEDWGATRAVINASLEV ADEYDIAVAIHTDTLNEGGTIEDTLDAIGGRAIHFFHTEGAGGGHAPDQIVAAGFNNVFP ASTNPTMPFTINTSDEHLDMVMVCHNLDKTIEEDVAFADSRIRPETIAAEDVLQDMGVFS IMSSDSQAMGRIGEVVMRTWQTASKMKDQRGALKEDEGNNNDNFRAKRYVAKYTINPAIA HGVSEYIGSIEVGKRADLVLWEPKFFGVRPKQILKNGLIIMAPSGDPNASIPTPQPVIYR RMYAAIGGGIGNSCITFVSKAAYESGIKEKLDLKRMVLPVHNCRNIGKKDMKLNFETPNI KVDPETYDVTIEGKKISCDPVDKVALGQLYNLF >gi|325481212|gb|AEXN01000011.1| GENE 15 9958 - 10950 855 330 aa, chain - ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 330 1 330 330 543 85.0 1e-154 MTYFDFVKDYMKVDECKNNKKYSSAGHTFCWKKEDSTYGEGLYWFYEGDVFIIDIHDFYI RKEIVQNNTYSMADYVSIYSSYIVSANGEKFSPYQTLTANSLCTLDFDNIKDDFLFLLHE NSYYLSVSIGFKRELLEKQLSSINIDPESFYEALLETNQIILTKSLEKVAMEILNCKMDP PAADFFFKAKANEWVSIVIDTYLNRKKYKIESDDNKALEDVARFLDDHFAMNVNQETLEK ISKMSGTKLKNLFKEKYGQSITEYTQRKRMNVAETLLLNTELPIKEIAESVGYTSHSKFS IYYKRYKGKLPSEVRNLVCNDHKLECDCSD >gi|325481212|gb|AEXN01000011.1| GENE 16 11027 - 12865 232 612 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 364 584 2 226 245 94 26 6e-18 MYNKNTMIVIINKLNLYLKGISKKGDVIMKIYKKLFAYVQDKKYLGFLAIVFSAISAVLT VYGYYLIYKFLDKLIINSNLSGAESIALKSVITLTSGAIFYFVSGTFSHILGFRLETNLR KRGIDGLEKASFRFFDLNPSGQIRKIIDDNAAQTHQVVAHMIPDSSQAIVTPILVLVLGF IVSIRVGITLLALTIIGGLILGAMMGEQEFMIIYQEALSKLSAETVEYVRGMQVVKIFRA NVESFKSFYKAIKDYSKYAYNYSLSCKKPYVLYQWLFFGLIAILIIPIVYFMTRLGSAKL ILLELIMILFLSGVLFVSFMRMMWYSMYISQGNYAVDTLEKLYEDMQKDKLVHGDVNNFK NYNIEFENVSFAYNDKAVIENLSFKLEEGKSYALVGSSGSGKSTVAKLISGFYNVNEGRI KIGGIPISEYSDEALIKAISFVFQDSKLFKISIYDNVALANKEASRDEVMKALKLAGCDL ILEKFPERENTVIGSKGVYLSGGEKQRIAIARAILKDSKIIIMDEASASIDPDNEFELQK AFKNLMKDKTVIMIAHRLSTIKDLDEIIVMDSGKITERGSDKELMLRDTSYKRLQEMFNS ANEWRVSNEGVL >gi|325481212|gb|AEXN01000011.1| GENE 17 12849 - 14570 1553 573 aa, chain + ## HITS:1 COG:SP1435 KEGG:ns NR:ns ## COG: SP1435 COG1132 # Protein_GI_number: 15901287 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 573 9 581 581 922 89.0 0 MKEFYKKRFALTDKGARNLTKATMSSFFVYCINMLPAILLMIFAQEVLENMSKSKGFYIA FSVLTLIAMYILLSIEYDKLYRATYQESADLRIRTAENLSKLPLSYFSKHDISDLAQTIM ADIEGIEHAMSHSIPKVGGMALFFPLISVMMLVGNVKMGLAVIIPTVLSFIFIPLSKKHS VKGEKEYYRVLRENSESFQENIEMQMEIKAYGLSDEMKEILYEKMDKGEKVHLKAEIANI LIMSISSIFSFISLAVVIFVGVNLIINKEISALYLVGYLLAAMKIKDSLDASKEGMMEIF YLTPKIERLKEIQNQELQEGEDYNLQKFDIDLKDVEFAYNKDAKVLNGLSFKAKQGEVTA LVGASGCGKTTILKLISRLYDYDEGQILIEGKDIKEISTESLFDKVSIVFQDVVLFNQSV MENIRIGNQNASDEEVKRAAKLANCTDFIEKMDKGFDTLIGENGAELSGGERQRLSIARA FLKDAPILILDEIAASLDVDNEKKIQESLNNLIKDKTVVIISHRMKSIENADKIVVLENG KVESEGKHEELLQKSKVYRNLIEKTKMAEEFIY >gi|325481212|gb|AEXN01000011.1| GENE 18 14581 - 15162 742 193 aa, chain + ## HITS:1 COG:no KEGG:SPJ_1335 NR:ns ## KEGG: SPJ_1335 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_JJA # Pathway: not_defined # 1 193 1 194 194 269 89.0 4e-71 MDNKKLKVKDLVSIGVFAVIYFALMFGVGMMGMIPILFLLYPTVLAIVAGTVVMLFMTKV QKPRALFIFGMIAPLVMFAMGHTYVLPVISLIVMIIAELIRKIGNYNSFKYNMLSYAVFS TWICGSLMQMLLAKEKYIELSMMMGKDYVEALEKLITYPHMALVALGAFLGGIIGAYIGK ALLKKHFEKAGIV >gi|325481212|gb|AEXN01000011.1| GENE 19 15162 - 15851 411 229 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 85 229 1 145 147 230 91.0 2e-60 MPIFSSNAPFNPNPISKILAVFLTGLTVVHSINIGFEIAIVCLIGILFYLNGYKKTLFKW IILCGILYSLPNFMVLSELNPILKMFLSIPIVFRMFLLPFMAASFMIKTSDVGTIISSMD KLKISKNLSIPIAVMFRFFPSFKEEKKNIKMAMRVRGINFKNPIKYIEYVSVPLLIISSN IADDISKAAETKAIENPIAKTRYTRVKIQLIDFVYVLAALGLIVGGLVW >gi|325481212|gb|AEXN01000011.1| GENE 20 15845 - 17209 212 454 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 259 451 3 209 245 86 30 1e-15 MVEVKNLSLDYGEERILDGVSLSIAEGECVLFTGKSGSGKSSLINSINGLAVRYDNAETK GEIIIDGKNIIDLELYQISMLVSTVFQNPKTYFFNVNTTLELLFYLENIGLARKEMDKRL SDMLEIFPIKNLLNRNIFNLSGGEKQILCIAASYIAGTKIIVMDEPSSNLDIKSINVLTK MLKILKNKGISIIIAEHRIYYLMDIVDRVFLLDKGKIKKTYARSEFLKLDKNELNALSLR DKELSKLEVPYLQGGGEYQIKNLSYIFTDDECLSIEDISFKLGKIYGIIGSNGQGKSTLL RCLIGLEKKSKEEIYFKGDKLSKRERLKNSSLVMQDVNHQLFTDEVFKELSLGVKNFDEE EAKIILNNLGLDEFIKRHPMSLSVGQKQRLAIASVMCKDSPFVYFDEPTSGMDYSNMIKI SELIKKYRNKDKIIFIVSHDIEFLNEVADEIFEL >gi|325481212|gb|AEXN01000011.1| GENE 21 17435 - 17812 191 125 aa, chain + ## HITS:1 COG:PM0679 KEGG:ns NR:ns ## COG: PM0679 COG2832 # Protein_GI_number: 15602544 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 120 1 120 120 95 50.0 2e-20 MKYIFIVLGFLFLGIGIVGIYMPLLPATPFLLLAAACFAKGSEKFHKWFTSTKIYKNNIE PIKDNKGLTMKKKIKILAMITFFIAISFYFVKISHARICLILVLIFHYIYFFFKVKTVKE IENAE >gi|325481212|gb|AEXN01000011.1| GENE 22 17802 - 19505 728 567 aa, chain + ## HITS:1 COG:HI0663m KEGG:ns NR:ns ## COG: HI0663m COG4988 # Protein_GI_number: 16273636 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Haemophilus influenzae # 1 562 2 573 581 359 37.0 1e-98 MLNKNLLKELGKEKRSLIVLIVLKVLELFTNICLIFSVGGFLNQIVKGEYGVRAFLFQLI AVMLIKIVIIKYNFFISHKISNRIKKSLRQRLFRKVYGFKMEYGEKISISEMINLSVEGI EQLNIFYGELLPQLVFSLMGPVLLFIIMSFVNFKIAVIGLVFLPFIPIAIMMVQQLAKRV VKSYWKSYADLGEVFIDFLYGLTTLKIFNADGKYNDKLNDMAEDFRVKTMKLLMVQLNNI TVMDLVSYTGSATIIYMCLKYFAAGEISVFIGFVFILLSQEFFNPLRRLGALFHVAMNGI SAATTLFEVLDIEDHKDGTSVIDEGEVEIALKNLDFSYDKEPILENINLSCKENSITCLV GKSGSGKSTVAKLICGMLRDEGSIYYNGKNHIKTDSIIENICMVDNNPFIFSNTLRYNLA FASPGASDEELNEKLKVVGLYDYFKNQQGLDTVIESEGSNLSGGQKQRISIARALLRKPK VLILDEAISNIDIESEEIILNILSKLKSDMTIILITHRLRNTEIADYIYFLKDKKVIEEG SFEEMKEKKNFGELYNSQMDLEMWGVA >gi|325481212|gb|AEXN01000011.1| GENE 23 19502 - 21160 182 552 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 338 539 3 207 223 74 28 4e-12 MRNFRDIRELLKDLLNLVKPLRLQMFFAVLFGLSGHVFATLIPGLGAYYFGKIYIGDIVN LKTVLVILLALAVLRSLFKYTEQLFNHYVAFKTLAIIRDLVFKSLRRLCPAKMDTKNKGQ LISIITADIELLEVFYAHTISPVLIAFFHTLIFFVILLKIHWQYALTLLVFHVVMGVVVP IITQKIGESLGANQRENLSNLNLYILESLKGIKEVINFSMEKERMKELNKLTKDLNISSQ KLSRNMGNNFATSSTIILIANIVFIIIGAKLYSQNKVNFLNLIFPIAIFISSFGPTSALA SLGNNLVLTFACGKRVMGILREEPAVEGVENNNTVSYERLEVKDLEFSYDDTELLKDFNM TCRLNEVVGLEGKSGCGKSTALKLVMRFFDPQRGKILLNGEDIRDIDSKNLRDNISYAAQ ESHLFKGTIKENLLVANEMASETDLVEATRKANIYDFIMTLDQGFDTEIVKDNAMLSTGQ IQRLALARMFLRKSKLYILDEPTANIDAYNEGIILKSLYEEKEDKTIIISSHRKSTLRIC DNVINMQRSINS >gi|325481212|gb|AEXN01000011.1| GENE 24 21377 - 21790 291 137 aa, chain + ## HITS:1 COG:no KEGG:CDR20291_1808 NR:ns ## KEGG: CDR20291_1808 # Name: not_defined # Def: putative sigma factor # Organism: C.difficile_R20291 # Pathway: not_defined # 1 136 1 136 136 152 61.0 5e-36 MNKEYYLFVNGKKIEVSEEIYKLFWQGKNHENYLKQIDLKNHLLIFSSFDRDGHFEDSIV DERFDVDKIVQTQMMIEVVRDALSKLNDEEREIIERLYFNDETLRSVDETKKISHLALVK RRNKTLDKLRELLKDFR >gi|325481212|gb|AEXN01000011.1| GENE 25 21937 - 22155 247 72 aa, chain + ## HITS:1 COG:SA0690 KEGG:ns NR:ns ## COG: SA0690 COG4604 # Protein_GI_number: 15926412 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type enterochelin transport system, ATPase component # Organism: Staphylococcus aureus N315 # 4 61 1 58 253 63 53.0 1e-10 MEIMLETRNLTKKIKGQMILEDVSIKVEKGKIYGLLGPNSAGKSTLLKVITKAMNSTSGD IFLKEKACVHKI >gi|325481212|gb|AEXN01000011.1| GENE 26 22137 - 22271 207 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325846674|ref|ZP_08169589.1| ## NR: gi|325846674|ref|ZP_08169589.1| mutacin ABC transporter, ATP-binding protein MutF domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] mutacin ABC transporter, ATP-binding protein MutF domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 44 1 44 44 77 100.0 2e-13 MCTQDLKKVGAIIEHPAIYPNLTAYENLEVLTVLLNIAWIVKLS >gi|325481212|gb|AEXN01000011.1| GENE 27 22346 - 23341 273 331 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 5 304 11 312 317 109 30 1e-22 MAYNHLTIKELIWIEQYYKSGEKVTNIAKYLSRSRQTIYNVINWLKKGSTIQEYYDKYKK NKSKCGAKVKLLGKKEQEYVLNKLSKGWTPDVIIGRGEIKFSMSSRTLYRRFKDGSLDKK LLPMKGKRKKNGSVEKRGKQAFKRSIHSRNKSYPNIKNEFGHFEGDTIVGKDHKSCVITL LERVSKAIITLKPENRTAKAIEDRLNDWLDQIPRHLVKSITFDCGKEFSNWKSVYNNHDI SIFFADPGCPSQRGLNENSNGLLRKDGLPKKTDFRVMCEEDIVSVASYRNNIPRKSLNYK TPLEEFMNLVYSVKVNLTNGIIYLRLLRIYL >gi|325481212|gb|AEXN01000011.1| GENE 28 23520 - 23741 162 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPYIVYGMVSIFMKDQNEYLDKLPLFKRLITKMNIAFGYGEITINMNQIKNMDGEELAQT MNEYRKDRRKRKS >gi|325481212|gb|AEXN01000011.1| GENE 29 23824 - 24183 134 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 27 113 232 315 317 56 35 5e-11 MVDRSKNSMLVAIDKLIKSLPLEALKTFTSGRGKEFACYEDVERRGINFYYADAYSAWQR DINENSNGLLREYYPKKTDLSKISINELIKNLMELNIRPRKCLEYQTPFDLFIHDLGLV >gi|325481212|gb|AEXN01000011.1| GENE 30 24231 - 24455 85 74 aa, chain - ## HITS:1 COG:BH2524 KEGG:ns NR:ns ## COG: BH2524 COG2826 # Protein_GI_number: 15615087 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Bacillus halodurans # 18 74 120 176 314 80 73.0 9e-16 MYALKQYNLIYSEIIDFDISKLRRKGKSRKTKETRDRFNIGKSINKRPKELKKRTSIGHW ELDTVVSSRGKSKG >gi|325481212|gb|AEXN01000011.1| GENE 31 24694 - 24771 74 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNNFNTDLIQILAQGLDINDFSSNS >gi|325481212|gb|AEXN01000011.1| GENE 32 24912 - 25562 711 216 aa, chain + ## HITS:1 COG:CAC0524 KEGG:ns NR:ns ## COG: CAC0524 COG0745 # Protein_GI_number: 15893814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 215 1 221 228 135 38.0 7e-32 MKKILIIEDNEDLAFQIKKYLTKNGYGVEIANSFYEADYKMSIDIDVALLDINLPDKDGQ YLIEILKDKNIRVIVTTVKNDEDFIVKALDQGADDYLTKPFSLAILRARIDAVLRTIALS QEKIITYKDIKIDLKESIVYFKGKQIDLTPLEYEILVLFIKNPHRVYTRGQLLEMFWEDR DKFVNDNTLTSTIKRIREKLDREVISTVRGIGYRMD >gi|325481212|gb|AEXN01000011.1| GENE 33 25562 - 26422 537 286 aa, chain + ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 12 282 46 327 329 122 32.0 7e-28 MVYVFWIISLGLLYYLLESRKKNRINELIGLIENMKNQNYKMPMKQDDFSILDDKIYKLF IEIVEAKETTTKNSEKQIEYLEDIAHQIKTPITSMLFSIENLEMDFPDNRDIEILKRQTI RLNSLSDILLKLSSLDANKDLMKEEQIRLDELVDYALDSLDLRKSINVEIGESLKKNSIN GDFYWLAEALINIIKNADNRPSCDKIVLSSYKNPLYISLIIEDNGGGIEKENIKKIFKRF YKTPDSNGFGIGLAMAKTIVEKNNGVISVSNTRDGARFEIKFYNVT >gi|325481212|gb|AEXN01000011.1| GENE 34 26475 - 27155 336 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 2 200 3 199 223 134 39 6e-30 MEILKVENLRKEYGEGNSKVIALDGVNLEIERGEFVAIVGPSGSGKSTLLHIIGGVDSPD GGKVYIDGNDISKYSSKELAYFRRRKVGLIYQFYNLIPNLTVRHNIELPLKLDKRKINQD EFSDIVKKLGIESKLDSFPSELSGGQQQRVAIARSLIYNPSIILADEPTGNLDRKNSKEI IEIFKYFNKTLKQTIILITHDEEIALQANRIITIVDGKILGDERNE >gi|325481212|gb|AEXN01000011.1| GENE 35 27259 - 29580 1595 773 aa, chain + ## HITS:1 COG:CAC2731 KEGG:ns NR:ns ## COG: CAC2731 COG0577 # Protein_GI_number: 15895988 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 3 683 55 784 875 112 23.0 3e-24 MASSFYHGEIKEELSNEDVEKLKSIEDIDLVGKMSLNPDNGRLGDDLVVVNYQDKAINKM REYSRLINGRFAEKEDEIVLSESIVKKNKLKIGDKLELDLGKRFLNGEEIGPTSANTDRE KFEIKGSKSFTLVGVYGDVYNKYSKLSFALGLQDKMPTFRTFVKFHSFEEAYKNKDKIQS EINKILGKDVHLEFSKSLINYYGVEHEPLQNIKSKAVTVLSVLGCIAIFVFFIKNIFWVW GLRKIRELSIYKSIGSSNGQIYLLLLKEGLVTTAIPILLGHLVGFFSIYYLYKYIQIDKQ LSEFNLVKFNPLLSLAILLVSFTIVALAIKSPAKKISKINIIDGIRGNIDFSKSKKKRAK DFWKELKLNNLASIKSQRYISAIGIIIISVFIITIGISTYYRDYSSYDNGYNFSVDYFSE KNQVPKILKEIVDKIPNEKSYISKDKYVQVENTNEFSKEAKAAGLDEEARKNIKKYKAKG MDGFIIALEEKDLKKLGGKKGEFVLYNSIQEDSSIPIAQAKRIPYFENPQTLDINLNDYK KSIKISKTITDLGKYKSRTMPFDVKVYTDFDTYFKLMEESGDEKYTEYAYTLNMKIKDSD TKDVKEYVEAMIREQISPEDRFNITTGEEIAKNEYKDVKSFIKFAIGIASIIFVLNITNG YSSINLSLMSRKKEIGSLYSCGMDVDELKNIYQKEFIGEQIKSFTISIIVSLGLMFVISI IASDLRMSTLIKYYDYKSFLGFSLVVYGINLIIYHFSLKRILDRPTIDLIRTI >gi|325481212|gb|AEXN01000011.1| GENE 36 30232 - 30549 375 105 aa, chain + ## HITS:1 COG:no KEGG:Apre_0590 NR:ns ## KEGG: Apre_0590 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 105 1 105 105 169 96.0 4e-41 MKRDEVLARSREEYKYHDEMMVDIFKKAGEVSSQIGLAVAAILFGIEAFFFNSFNYGILS IYFSIEATKELVKYARLKERKQLLMGILMAIIGIALFVANLITLK >gi|325481212|gb|AEXN01000011.1| GENE 37 30559 - 30765 196 68 aa, chain + ## HITS:1 COG:SPy1934 KEGG:ns NR:ns ## COG: SPy1934 COG1476 # Protein_GI_number: 15675737 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 11 67 6 62 68 60 50.0 7e-10 MDDKLVLKNHLKEVRKEKGYSQQQLADEVGVSRNTISSIETGQFNPTAKLALILCIALEK KFEDLFYF >gi|325481212|gb|AEXN01000011.1| GENE 38 31467 - 31853 414 128 aa, chain + ## HITS:1 COG:no KEGG:FMG_1299 NR:ns ## KEGG: FMG_1299 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 128 15 142 144 182 74.0 3e-45 MSISKKDMKILLKSQQGELDAVLMYRALANVVKDKNDAETFKKLAAEEGHHSAVFHGLTQ ENLKPKKTLAFFMPILYRLIGKKHLYPLIIKGEYNAADNYAPVAERFPEIESVKKDEKRH GDIVASLL >gi|325481212|gb|AEXN01000011.1| GENE 39 31985 - 32938 844 317 aa, chain + ## HITS:1 COG:SP1754 KEGG:ns NR:ns ## COG: SP1754 COG4129 # Protein_GI_number: 15901585 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 4 310 2 308 317 148 28.0 1e-35 MNKTLVSTTIKTAIAATLSLLVAKAFGLKFASSAAIITILDIFETRKATVKGGVKRTLSA IIALVLGILVFEIFAYRTWAFGIYLLLFVPISFLLKIELGLGPSSVAVTHLLSYGQINSS IIINEIGLVTIGTGFAMLTNLYAPESQDELIDWIEDIDDDIKDILKFFGHTLVNDLDVKI YEKKIKKLENDIDKALDLAIIENDNRIENSKKLLIGLNHREREMDLLMEMYHDLKAIPAE YADGKLISDIMIDTANNLTKDGDMVKVKKRIEFLKEHFKIMKLPKTHEDFVIRSSIFQVF RSLNQFIDIRNSINDRA >gi|325481212|gb|AEXN01000011.1| GENE 40 33158 - 33331 104 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325846740|ref|ZP_08169655.1| ## NR: gi|325846740|ref|ZP_08169655.1| hypothetical protein HMPREF9246_0478 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0478 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 57 1 57 57 64 100.0 2e-09 MKIVSKDIFKIIMVIGFIIVFLNLFYFFAFKDDLLNKNTMSGILIIIFSLYSNKKAK >gi|325481212|gb|AEXN01000011.1| GENE 41 33466 - 33804 213 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696476|ref|ZP_03304604.1| ## NR: gi|212696476|ref|ZP_03304604.1| hypothetical protein ANHYDRO_01014 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01014 [Anaerococcus hydrogenalis DSM 7454] # 1 112 1 112 112 161 100.0 1e-38 MNFEKIVINLLPITGLFLSFFYKYKANGNISKHSGFRTQLSMKSKENWNYAHMYAAKLLR IYAIFFILLNIIIIFSNSLTNTTMTIIVVLQMLFYFIIGYKVNNALAKRENG >gi|325481212|gb|AEXN01000011.1| GENE 42 34012 - 34221 266 69 aa, chain + ## HITS:1 COG:DR2454 KEGG:ns NR:ns ## COG: DR2454 COG1476 # Protein_GI_number: 15807441 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Deinococcus radiodurans # 1 64 1 64 64 78 60.0 2e-15 MKNRLELIRKENKITQEELASILEVSRQTIGSLENGRYNPSIILAFKIARYFGLTIEDIF IYEGEDYEK >gi|325481212|gb|AEXN01000011.1| GENE 43 34211 - 34603 491 130 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0516 NR:ns ## KEGG: HMPREF0424_0516 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 2 130 5 133 133 128 59.0 6e-29 MKNNKMWYFGYIVGFLILILLFTIKGNEIRNILLTLIFAISTSISSVKIMHNKMIEKDKS YRINVNDERNVKIKDKVNATMSYILLILIGLVALICLAVKAYLPAGILAIFIMFYPMITF FINGYYEKKY >gi|325481212|gb|AEXN01000011.1| GENE 44 34767 - 35099 223 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325846589|ref|ZP_08169504.1| ## NR: gi|325846589|ref|ZP_08169504.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 110 1 110 110 184 100.0 1e-45 MKKVSKMDEMDRNILLRSESLAYKFAVIVLSLWVIFSSYKSLFSDFKYNPLPVLILCLTI SVQNFSRIYIKNKMVEGDEEYGRKNKFTEIIALTLSILALIIFVGMQVIK >gi|325481212|gb|AEXN01000011.1| GENE 45 35105 - 35302 154 65 aa, chain + ## HITS:1 COG:MJ0272 KEGG:ns NR:ns ## COG: MJ0272 COG1476 # Protein_GI_number: 15668446 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Methanococcus jannaschii # 1 64 14 77 79 70 62.0 5e-13 MNNIIKKLRKENGLRQEDLAKKLGVSRQTIIAIENNKYDPSLELAIKISIFFDKTVNDIF LFENK >gi|325481212|gb|AEXN01000011.1| GENE 46 35471 - 35899 472 142 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0425 NR:ns ## KEGG: HMPREF0868_0425 # Name: not_defined # Def: ArsR family transcriptional regulator # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 142 4 145 145 214 85.0 1e-54 MKEVHILNSLEEINIVSDPLRLKIIMTLGTSPKNAQDLSDALGVSRSKIHYHLKILEKNN IIEVVDTELINGITQKYFLPVAKAFIPNSEIFNKNLEEKVFSFKISSKSYEPFEKELNEL IKKYSKDEGSEESFQVQIYKLS >gi|325481212|gb|AEXN01000011.1| GENE 47 35850 - 35990 57 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKVVRKVFKYKFINYLKTSKLILTGKKMHNCQNKQNVKYKENVKND >gi|325481212|gb|AEXN01000011.1| GENE 48 35983 - 37206 1164 407 aa, chain + ## HITS:1 COG:VNG2231C KEGG:ns NR:ns ## COG: VNG2231C COG0477 # Protein_GI_number: 15791050 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Halobacterium sp. NRC-1 # 1 403 4 443 447 166 29.0 7e-41 MIKNKDFYVLLLGRLITNFGDSLYAIASTLLVYKMTGSTIYSGLTLFLTSSTAIVQLLLS PILDRINMKKFLILSQLIQAVLILIIPFLYKFGKLSVYHIMIIMPIISLINQLVYPGQIS LLPKILSEKELVRGNSLMTMAYQGSNAIFDTLAGFIISIFGFMAVFFADSISFILTGILF CLLSKKLSHYKKRENNFEENILKNHFKSLKDGLNLFKDSRIFALVFGIVFINFAATSISA VLPGFTQNEIFYSLMLAGMGAGLLLGSLFAGFPKLKEIPLGKLYIYGMMIVALAWICLSN FQNNIKIGVVLYGLGWFVVGLVNVYAQTMVQIIVPNGKLGSAMGTMVGISTFMAPLGALF GGFLGEYLSSSRAIFIGSFIIFLVAIFWALNENIRKLPSVNNIHKNY >gi|325481212|gb|AEXN01000011.1| GENE 49 37249 - 37728 371 159 aa, chain + ## HITS:1 COG:no KEGG:Lebu_2179 NR:ns ## KEGG: Lebu_2179 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: L.buccalis # Pathway: not_defined # 7 158 3 155 155 143 53.0 2e-33 MKKTIYIRRFQEKDAKEVSELIIKTLRTTNIKDYSKDYIEKGVRILNSENIKQKARIRHF YVVCHDEKIIGCGSIGYDEDKNESCFYTIFILPEYQKKGVGRLIVENLENDEYAIKSKKI IVPSSITAKSFYLKLGYFYKDNNKKANNQGLFILEKLRK >gi|325481212|gb|AEXN01000011.1| GENE 50 37977 - 39002 1434 341 aa, chain + ## HITS:1 COG:SPy1056 KEGG:ns NR:ns ## COG: SPy1056 COG2855 # Protein_GI_number: 15675048 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pyogenes M1 GAS # 21 328 24 330 339 171 36.0 2e-42 MNKKTSAIIVCVLIGIVATFLAGLQNFVGGPMIGLLIGMLIVNLMPKIDSEFKEGTSFVG KKFLNFGIILAGGTLNFAQVLGFGAKAMPLILTNLCLAFLVANFVGKKFELSRNTKILVG SGTTICGGTAIATLSGILKAKEEEIAYAMTAIFLFDVIAALSYPYLAGAIGLSQNQFAFL AGTAINDTSSVAAAESTYNALNGVNLNNAITVKLARTTVLIPLALVITALQVRESSHNSE NMSIGESFKRSFPLFIVGFLLMALLNTMGVFEILPDKGAIFGPAYKFFVTVALAGVGFKI KFKDLFTKGLKPIITGGLTWLVVATSSMIFIHVFEGFINSL >gi|325481212|gb|AEXN01000011.1| GENE 51 39138 - 39887 328 249 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 240 245 130 33 5e-29 MIKYENVSMSYTGNVKVLDNLNFEIKEGEFFVIVGPSGSGKTTTLKLINRLIEQNEGDIY FNEKRLKDYPLRDLRLDMGYVLQQIALFPNMTVGENISLIPEMKKMDKKKIQETVDRLLK SVDLNPKDYKNRLPEDLSGGEKQRIGILRAIAASPKVLLMDEPFSALDPISKTSLQDLIK KIHDDFKITTVFVTHDMDEALKLADRICVMKDGKVIQIASPSEIINNPENNFVSEFFDNE KRINDEQFS >gi|325481212|gb|AEXN01000011.1| GENE 52 39871 - 41382 1522 503 aa, chain + ## HITS:1 COG:SP1860_2 KEGG:ns NR:ns ## COG: SP1860_2 COG1732 # Protein_GI_number: 15901688 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) # Organism: Streptococcus pneumoniae TIGR4 # 229 503 25 298 299 333 60.0 5e-91 MNNLVNTFIERKSDWLEALFEHLQISMISLIISILIAVPLAIFLSHRKKLNEWVLQITGV FQTIPSLALLGLFIPFMGIGKVPAITALVIYALFPIYQATITGFSEIDPSLEEAATAFGM TRWEKLKKYKLSLAMPIIMSGIRTSAIMIIGTATLAALVGAGGLGSFILLGIDRNDSALI LIGAISSALLAILFGSLIKSLVNKKPINILMSLIVTIIITIMSLFSFGKKDNKLTIAGKL GAEPEILINMYKELIEENSDIKVEVKANFGKTSFLYEALKNGSIDMYPEFTGTITNSLLK EDVGKISNNPEKVYKKARDMIYDQDKLVYLKPSKFQNTYALAIKEDYAKENNIEKISDLK KVENNVIAGFTLEFNDREDGNKGLKSLYGLNFDVKTMEPSLRYTAISNGSINLTDVYSTD SQIITNKLRVLEDDKNLFPPYQAAPLLREETIKNHPELKEILEKLSGKITSEEMTKMNYL VDVEGKSAKDVAREYLKDKNLIK >gi|325481212|gb|AEXN01000011.1| GENE 53 41400 - 42167 500 255 aa, chain + ## HITS:1 COG:no KEGG:Apre_1118 NR:ns ## KEGG: Apre_1118 # Name: not_defined # Def: NERD domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 254 1 254 255 315 67.0 8e-85 MELNISLGFFIFSVLLVTVFKSKFKGDIGELALALNVKDLDKNKYRKIHDIKLKNTSNHT KTSQIDHLIISTYGIFCIETKGYKGKIYGKEFSKDWVQYLSNQKNYFMNPVLQNYGHIKA VENILKNSYPNMKYFSIIAFSAEANLDSIEVKKAKICKISKVSDLIKDLSKDEILKKEDL DKIEILIKENKSYQSDFYHTRDIKKLKKENKEKIEKNICPRCGGKLVEKEGKYGKFIACS NFPKCRFVYNKNKKK >gi|325481212|gb|AEXN01000011.1| GENE 54 42258 - 42683 305 141 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0506 NR:ns ## KEGG: EUBREC_0506 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 8 136 9 137 146 80 36.0 1e-14 MHFWDQHKNITNYYEKLTSSICQQYKLTQLEYDILMFLYNNPKYNTASDIVRIRKSTKSH VSTSLKNLENKKLIIKKQNKENRKYYEIFLLEKANIIIKNGKKIQEQFIEDLFEGISEDD MVIFKKVFDKICKNADFHLNS >gi|325481212|gb|AEXN01000011.1| GENE 55 42692 - 43108 355 138 aa, chain + ## HITS:1 COG:no KEGG:Elen_1414 NR:ns ## KEGG: Elen_1414 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 1 132 3 138 158 110 49.0 3e-23 MFKVKSKSLLIIAGIVWLIAGFNVARLGLISFFTIEKNINLYIFSLIIFILFGFMFYKMT KKHTKRILDYKGRIYFWKFFDKKSYLIMAFMMGGGIGLRSMNILPDYFIGFFYTGLGFAL ALAGLTFIKNYFLKIKER >gi|325481212|gb|AEXN01000011.1| GENE 56 43111 - 43794 459 227 aa, chain + ## HITS:1 COG:no KEGG:Olsu_0661 NR:ns ## KEGG: Olsu_0661 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 13 225 7 219 222 197 49.0 3e-49 MKERNYKMKIFDIFEVIFDIGYLIFDLIGGILFFIFSKGEKLFILYGILTLILCFGDAFH LIPRVKKSLFGINEKIKKQMGFGLQVSSITMTIFYILLLYIWKETFKNLKAPTIIEILIW LSALIRIFICLLPQNNWTSGNENKTLSIIRNSIFLISGLGIIILYTISGNIYGLRMHRMV WAIIISFACYLPVTLFSKKYPKIGMLMIPKTCSYIWIIVMGLQILFY >gi|325481212|gb|AEXN01000011.1| GENE 57 43954 - 45048 1718 364 aa, chain + ## HITS:1 COG:gldA KEGG:ns NR:ns ## COG: gldA COG0371 # Protein_GI_number: 16131783 # Func_class: C Energy production and conversion # Function: Glycerol dehydrogenase and related enzymes # Organism: Escherichia coli K12 # 5 362 16 376 380 315 44.0 1e-85 MKLLRAMREPLKYVQGKDALLKFHEEMEYMGKRWLFICSNSGYKSCHDKIEKSFEGSDDF RRYEIFGGISSKGEIEKMKKIVEDDKIDTVVAVGGGSAVDTAKATAYYAKKHIVIVPTVV ATDAPCTGLSVIYNDDGSFDSYLFYPTNPDAVLVDSQVIANAPVKFLIAGMGDALGTYFE GRASIRTESPSLEGTGITRTGLAIAKLCYETLRAYGSQAIKACENNVVTPALDAIIEANT YMSGVGADNVNCAAAHSFYNGLTSLGGHEAYHGSCVAFGTLVQLVLEGVPKEEFEDVQGF CLEVGLPVTLEELGVSTDEEIKTIAKNACVEGETIHNLAGDVTPDELYAAIIATDAMGKA VLGK >gi|325481212|gb|AEXN01000011.1| GENE 58 45185 - 45661 553 158 aa, chain + ## HITS:1 COG:no KEGG:Apre_1097 NR:ns ## KEGG: Apre_1097 # Name: not_defined # Def: thioesterase superfamily protein # Organism: A.prevotii # Pathway: not_defined # 2 158 3 159 159 228 71.0 7e-59 MKENICIQDTYGERFQHCWGCGPKNEMGLHLKSYPSEDEKSVIAKIIPDKMYTGGVPQNL FGGMIAMIFDCHGTASAAYFSHKNKGLDLDENTVIERFITARLEIDFKKPTPMNEEIIVS SKLIELGERKAIIEMQMLARGEIRAKAKMIAVKVKDNM >gi|325481212|gb|AEXN01000011.1| GENE 59 45816 - 47129 1168 437 aa, chain + ## HITS:1 COG:lin2192 KEGG:ns NR:ns ## COG: lin2192 COG0534 # Protein_GI_number: 16801257 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 1 434 8 440 443 203 30.0 7e-52 MDEKNLFKDFSKYVFLNIFGQIAFSCYTLMDTYFVSVKLGADGLAALNIAFPIFCLLNGL GLMYGIGGGIKYAICKSRNSEKRANRIFTSALLLALVTGIIFFIIGLSFSEKLVIFLGAD NNIFDITNTYLKVMLLFAPAFLLNNIMQAFVRNDKNPRLSMIAMIIGSISNVILDYIFIF PLDMGIFGAIFATGLAPIISMLIIMPYILKRKNGFHFIKMKVDVESILEIISKGFTAFIT EATSGIVMFVFNLLILGISGNLGLEAFGIISVISLVVIAIYTGLSQGIQPIISHYYGKND KEKVEKIFKYGLLTQMFISLIIYITIYFGRDLFASFYNEEGNIILQRYASEGLVLYFLAC PFIGINIVTSTFFASTEKVKLSQIISLSRGAIVLVPVAILMAKSFKLNGVWLSYPISEIL VSLISLFLIWKNLIKNK >gi|325481212|gb|AEXN01000011.1| GENE 60 47228 - 47923 314 231 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 201 1 203 245 125 36 2e-27 MIHIENLKKSYGVGKEKINALNGIDLKLESGKILCLLGPSGSGKSTLLNILGGIETIDQG LVKVFENDLNKMNKKDLEKYRRKNLGFVFQFYNLISDLNVKENIEVGAYLSDNPIDVDEL IKNLSLEDQIYKYPNEISGGQAQRTSIARAIIKRPKLLICDEPTGALDYESAKDVLILIE KLNKIYNSTVIIATHNVQISKMCDYIMNIHNGLVRSFEENKEKIPARSVTW >gi|325481212|gb|AEXN01000011.1| GENE 61 47920 - 49116 844 398 aa, chain + ## HITS:1 COG:CAC1534 KEGG:ns NR:ns ## COG: CAC1534 COG0577 # Protein_GI_number: 15894812 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 58 392 54 382 746 114 27.0 4e-25 MMKNPINKRIFRQVRFYPFRFFPIFILIALVVTFSASFYTAQDSVKFVYYKELKDGRVED GQFTAINKLDKNTVDNIKKDHIKLYENFSIELNESKDKKLRGFINRNKINIGQLHQGRFP KTKNEIALSNNYAIINNKKLDDKIKLEGKTFKIVGLVSLPDYSSLLRNRQDLVMDTGYFG VCLFNKEGFDSFSEKTKKYTYAYHNLDKINKKDQRDKIRKIVEEINKNNFVIDYVIRADN HNISYVMDDMDGDVPTMTSFMIILFIALAFASAVEMKSLIEKEASLIGTLLSLGYKKIEV FTNYMAMPLFITVTGALVGNLLSYLFVYKKYVNLYYNSFDLAKFELKLSPRSFIITSLIP ILIYILVNSIIISKSLNYKPLDFLRKNLKKEKKKINLN >gi|325481212|gb|AEXN01000011.1| GENE 62 49176 - 50162 770 328 aa, chain + ## HITS:1 COG:CAC1534 KEGG:ns NR:ns ## COG: CAC1534 COG0577 # Protein_GI_number: 15894812 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 2 323 414 741 746 79 22.0 7e-15 MIALFFGIFLANLLLVISLSIRPVFTKYTENMKESMKYDYTYFVKGEDKNIKEEKASIIE AELVEINDKKIQIYGIDNTSKYKINSYDTLKENEAIVSQGFVDKYGLKKGDKFKIREPYK NKEESLKIKDIDKSINVFKIFMKRKYLNKVIGMDKEFFNTYMADKKLKLPKDIEISKIDK KEITKFTEHFLNNFGVFFDTMIVIGIFFFFIITVLISNVIIEKSRTNISYIKIFGFKNKE ITNIYIDPIFIFVIIFQVLMIPLINKIVQFFMFVSMSKLDAYIKAQIPLKIYIIAIIISI SLFILVQFIQKIKLSKINMVEELKVING >gi|325481212|gb|AEXN01000011.1| GENE 63 50382 - 51932 1860 516 aa, chain + ## HITS:1 COG:FN1422 KEGG:ns NR:ns ## COG: FN1422 COG1757 # Protein_GI_number: 19704754 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 16 511 1 471 473 360 41.0 4e-99 MEKKKSIRLPSFFEAILPIITMVLLMVYVFVFAKKEVDGKLEAVYDGAHMPLICGIVVAC IVGIICGHSFKDMLSGMIARINTTLDAILILLTVGLLISSFMMSGTIPALIYYGLELLNP KLFLPIGCIITALVGMACGSSWTATATIGIAFMTIGQGLGINPSITAGMVISGAYIGDKF SPLSDTTNLAAGVSKTGLFDHVTAMISTTGPVFIISLILYTILGLRANVVNYDPTIAEGI KTSLENNFNLNPLVLLPILIIVLVCVLRIEGLAGVMISVVVGIIFSQIFQETKSLAEIFE VLHYGPEIETGNAFVDAALAKGGMNNQMWTVNLILLAVSFGGALEKSGVVEKLFAHLKEK INSVGGLVLTTMATSIFCDATMCDQFLGIGVPAPLYEDKYDEMGLSRNFLSRTLEDAGTL WAVMFPWTACGAYQMKTLGVNPLYYFPFAFVNLLSPIYALLTAYLKRNIFWADGSYTNIF GKTKMKKKAHAPKEVEEYANAQLYKLRKEGKVPNIS >gi|325481212|gb|AEXN01000011.1| GENE 64 52090 - 52263 253 57 aa, chain + ## HITS:1 COG:no KEGG:SSA_1453 NR:ns ## KEGG: SSA_1453 # Name: not_defined # Def: hypothetical protein # Organism: S.sanguinis # Pathway: not_defined # 1 49 1 49 103 72 79.0 4e-12 MDLKDFTNKEQSQIKEGLSTAEISDKEAGDKILALVPEEWIKKIPFFCKKTLYYKNN >gi|325481212|gb|AEXN01000011.1| GENE 65 52187 - 52402 104 71 aa, chain + ## HITS:1 COG:no KEGG:FMG_1300 NR:ns ## KEGG: FMG_1300 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 10 71 42 103 103 79 75.0 4e-14 MLLFQKNGSKKFHFFVRKHSTTKTIEKIANEYPDLYQIAKKPGDLPEKEEKELKKIITDI FEEKMKKHNIK >gi|325481212|gb|AEXN01000011.1| GENE 66 52465 - 53652 1246 395 aa, chain - ## HITS:1 COG:FN1148 KEGG:ns NR:ns ## COG: FN1148 COG1301 # Protein_GI_number: 19704483 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 1 390 1 390 390 374 58.0 1e-103 MKKKSFFNSLVFKLVMGIIAGIIIGNFANEPAILVVSSIKTILGDLIGYIVPLIILGFVT PAIVSLKENAGKILTVTLLICYISSVGAGAFSFLAGKAIIPHLNIASNVAGAKEIPESIF KLTIDPIMPVMTALVTSIIFGIAVILTKSKTWENLLLELNNIVLKIVDVVVINMLPFYIA STFAVLAYEGVVLQELPVFLKIILIVIVGHFIWMTLLYTLGGIFSKTNPKEVFGHYLPAY LTALGTMSSAATLSVALKCAGKSKTLDPKIRDFVIPLCSNTHLCGSVLTEVFFVMTVSQI LTGKLPTTLNMIVFIALLGIFAIAAPGVPGGTVVASLGLIISVLGFNDTGTALMLSIFAL QDSFGTACNVTGDGAIALMVTGIFDRVPKNKNIKN >gi|325481212|gb|AEXN01000011.1| GENE 67 53745 - 55421 200 558 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 326 555 28 244 318 81 26 3e-14 MGILPIFSIIAPKLIIDEIYGQKRLKIIFIIAFLVLIFDLIRGLVNKLNANLLTESFESF FDVYTFKLSEKAIKLPVEKSDSKTVQDEMEKAHYAIFEIFKIYDLFAITINSTITGIFSL IVLMNLSIFVVLVVLVLILLNKKIVERIKKNELDYQKNDIPDLRAYRFFVNFSQDHRYFK DIKIYNGEDFILKKSEIFHQKLVKKSSAYYTKNGIYVGLMNVFSNFSILGSLFFLVVKLI EKAISLADFTLYFNSLISLINASKEIQKNYAQVIAFNSQLQSLFDFLNQKEENFDEGKIK KIDTKKITIKFDNVSFKYPKSNENILENCSFEIKNGETVALVGKNGAGKSTIVKLLCKFY KPTKGNIYLNGININDIDTKTYYKILSPTFQDFRLFPFRISENISANLLGEITNYQREKM DESFYLLNLKSWIDKLVNKEDTFLTFLFSKNSVEPSGGIGQKLALSRSMVHEGKFFIMDE PTSALDPRSEEEIFEKMLDISKGQTSLFISHRLSSTKYADRIIVCDNKKITENGNHEELM KEGGLYKKMYISQAKLYD >gi|325481212|gb|AEXN01000011.1| GENE 68 55501 - 57243 1412 580 aa, chain - ## HITS:1 COG:CAC0661 KEGG:ns NR:ns ## COG: CAC0661 COG1132 # Protein_GI_number: 15893949 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 1 576 21 608 627 167 29.0 4e-41 MKELKYIFRSMAKYEPSMYLLIILYSIFIGLKPFIWIISPAYILKNYQNGLDFMLGFFIL LLVLSTIISFFESFIMGNYRMKMNNIRYKYMNMVTKYALYLPYEEKTKKSESEKINSANK AVDSPFLGAGAVMMTLPEFLASLTSIAGFLWIFLKIGGIILSLIITLTIISTYIANKIPR EFSKFWNDQNENYNKFTKLNNELRSPLSKQDILIFDFINVFKSFYKKTNQDRIAYLVKTD KKTFKIYSLVRLINFIRDALIMYWLITNLMSEKLDIGDFYVYFTAILAFVNFNNLFMWIF NDFFDNLTRFKPFFKIINPYQKSFENKYLPKNLKIDLVNLSFKYPNSDKYVLKNINLTIN NNESIALVGENGAGKSTLALILAGFYKSYEGEIFINGKNFKKLDYDYNSLVSAVFQDSQI FPFSIKENILLNDSNRNLEKTYELTHLNKIIESYDKKDKQTLLRILDDDGVDLSGGQKQK LYLARSIEKNSSKLLILDEPTAQLDALAERELYTLYNDLTKNKSSIFISHRLASTKFCNK IVYLKDGKIKSTGSHEELMISDYDYKDLYNLQAKNYKEKV >gi|325481212|gb|AEXN01000011.1| GENE 69 57176 - 57388 137 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINKYMLGSYLAIDLKIYFNSFIKSLDGILLVVVSQGAFPHLQVTNFLFIINIIVHFSSP FFKANLILAI >gi|325481212|gb|AEXN01000011.1| GENE 70 57424 - 58971 1936 515 aa, chain - ## HITS:1 COG:L195271 KEGG:ns NR:ns ## COG: L195271 COG2509 # Protein_GI_number: 15673161 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Lactococcus lactis # 34 509 36 521 535 426 47.0 1e-119 MYIVRNIKIPYELDNYENLKKAIEEKIKRKIDTFKIYKKSIDARRGIFYVYQVLVDCDID KKTRKKLKNDIGEFVEEDLDLSNKNKINSAVIVGSGPAGLFCAYALCKNGVKVTLIERGE KIEDRVKTIDNFIKNLKLNPESNIQFGEGGAGTFSDGKLTSRSKDKRSREVFRILVENGA PEDILYTQMPHVGTDLLRKVIINIRKKIIKMGGNFHFNEIFTDLNIENGEIKSLITNKSE YQADEYILALGNSSRDTFIMLDKYVDISQKNFAVGFRIEHLQKDINFSQYKINDDRLPQA SYALKYFDRSKNISVYTFCMCPGGYVVPASSEENRLCVNGMSYHDRGNYNSNSAIVCAIG PEILGHYNLAGIKFQREIEEKAYKLGGSDFIAPVQKVGDYINGFVSKDLGEIKPTYKPGY KFADLNEIYPEKINEAIKLALIDFSKKIKAFSHEDAILTGVETRTSCPIRIERNKNYSTL KFKNLRPIGEGAGYAGGIISSALDGLKCAIEILEN >gi|325481212|gb|AEXN01000011.1| GENE 71 59054 - 59515 503 153 aa, chain + ## HITS:1 COG:SP0640 KEGG:ns NR:ns ## COG: SP0640 COG0456 # Protein_GI_number: 15900546 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 77 152 6 80 81 60 39.0 9e-10 MKVELVENKLEKESISSYILNDLKPWFEDEAAVKNYVEKSKDYIFFKASKNGKNIAFIVY KKTSDYTIEIFVMGVLKKYHRNHIGRNLFVKSIEILKNYEYEFVQVKTLKEGIDDGYDKT NKFYQALGFRKFESIDEIWSKDNPCQIYVKSIV >gi|325481212|gb|AEXN01000011.1| GENE 72 59912 - 61255 1394 447 aa, chain + ## HITS:1 COG:CAC1610 KEGG:ns NR:ns ## COG: CAC1610 COG1114 # Protein_GI_number: 15894888 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Clostridium acetobutylicum # 1 426 1 427 440 313 42.0 4e-85 MKKLSRSQFLQVSVMLFGLFFGAGNLIFPPLLGNQAGTFTFISLLAFCVTAVLFPVMGAI VVGKTEGLTNLSNRVSPLFSVVFTTAIYLSIGPGLGIPRAGSVPFEMAIAPYVPEGFNMN LARFLYTLVFFSLALVICLKPNKLVKRVGKYLTPSLLLMIVFMFLRVMTMDKNIAAPVGE YNNSPVVKGFLEGYNTMDAVAALNFGFVIAQAIKRFGIKDKNEVTNYTIKAGFVAGAVLF LVYAMLASVGMIGSSKLAGAENGAVILTYAVKSVFGNFGIVLLAAIFTLACLTTCVGLIT SGGEYFESLFNHKLSYRKWVLVWTLFSFLMANFGLNRLLEFSVPLLTVIYPVALVLIVMG ISHDFVNYSKESYMFAAVVSVFLPLVEVLNKSFGISLGFLTRLVESLPLYKEGLSWLLPT FFVLIIVTAVFKLLGTFKESEKVQERY >gi|325481212|gb|AEXN01000011.1| GENE 73 61405 - 62817 687 470 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 443 3 440 456 269 34 1e-70 MLEKISDFLGPINEVLYYPILIILLLAIGIYFTFRTKFLQVRLLKESINVVMEKPHEDGA VSSFQALMVSTASRVGSGNIVGISTAICLGGYGSVFWMWIVAIIGGASAFIESTLAQIYK KRDENNKSYGGPAYYIEQGLKSRKLGIIFAISLILTYAIGFNMLASFNLQTSFMTYSFYD PKRTPFIIGLILATITAICVFGGGDRIIKFTSTIVPFMGVIYILVAIVMIFVNIKYIPTV FVNIFEDAFNFRAIFAGLASSSMMYGIKRGLYSNEAGIGSAPNAAASANISHPVKQGLVQ MLSVFIDTLLICTATAFMCLSSGIEPIEALSGAPYVQESLSTLLGGFGNYFISFSLALFT FTTLIGNLFYVDSNLSYIHKKTPSKTFMLVFRIFAVVVILLGAMSEVKVAWDISDLLMGI MALINLPSILILSKKALDCLKDYEKQKHEGKNPIFKAKDIGIKENLDYWS >gi|325481212|gb|AEXN01000011.1| GENE 74 63150 - 64769 1624 539 aa, chain + ## HITS:1 COG:BH3449 KEGG:ns NR:ns ## COG: BH3449 COG1757 # Protein_GI_number: 15616011 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Bacillus halodurans # 33 526 3 505 516 301 39.0 2e-81 MKEKRKLPLALVISLIPILVSILIVGSGVETYASLWALLPPVVAIVMALITKEVYSSLFL GIIIGAILASKRSFAKVLDNIVVKGLTNSISQTSGIFIFLIVLGIMVVLINHSGGSKAFG EWADKRIKSRKGSQLATYCLCLMLFIDDYFNCLTSGSVMKPITDSHKISRAKLAYLIDAT AAPICMIAPISSWAAAVSGYAQGTGLSGIELFIRAIPYNFYSLLTLFFVVSLILFGNDYG PMKEFEDKAIKHGDLGNIAKAKVSAEDGHPDGKVRDLVLPILVLIISSVVCLIHVGGFFD KSSEFYMDFVNSFANTDSTVALPMGAIVTLIITIIYFVGRGVISFEKSMEAIPEGFQSMV PAILILTMATSLKNISNDLLGSTEFVGNFMKNAASGLNTFLPAVIFVVAILLAFATGTSW GTFGILIPIVASMFKPTDPIFFIGISACLSGAVCGDHISPISDTTIMSSAGAGCVHVDHV RTQLPYGITVAVISTFSFIIAGLTKSALISLIFGIIVIFIFMIILKIKINKEKKACVYL >gi|325481212|gb|AEXN01000011.1| GENE 75 64938 - 66350 778 470 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 439 3 440 456 304 38 3e-81 MFLLDNIINIADFLWSNIIGYVLLGVGLFYTIRLGFPQIRYAKDIKDVLKKNLKSDDNVS GFGALAAAVGGQVGTGSLVGVASAIVAGGPGAIFWMWVTSILGMVITFAETVLGQVYRVK LSDGTYRGGPAYYIRNGLGKKVLGVITAFLYIIGVGLCIAFMQTNSIAKGFQGVIEFNPI IVGVIVTILAGIITIGGVKRLTKVTGYLVPIMALFYVFVVFVIIITNITKLPSVIALIFK SAFSAQAAVGGIIGHSIMDAFRNGVARGLFSNDAGNGIAGIMHSSADVDHPAEQGFLGMF GTFVTTCIICSLTAFAILLTGVLGNGSDGINLVQDAFSAQIGYVGRWVVALSMAFFGFTT LIADLFYGEANIIHIFKDKFKIPLWIYRIFAAVMFIVSTKMSLDVVWGLIDVFVGILVFI NVITLMFLFKSVKVVLDDYENQKQKGKKPVWDKTNNSLYTDQGEYNNFDI >gi|325481212|gb|AEXN01000011.1| GENE 76 66451 - 67407 1263 318 aa, chain + ## HITS:1 COG:SA2395 KEGG:ns NR:ns ## COG: SA2395 COG0039 # Protein_GI_number: 15928188 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Staphylococcus aureus N315 # 1 309 1 310 319 253 43.0 3e-67 MNKLGRNVVLIGSGFVGSSYAYALVNSGLATKLSIIDIDEDKSIADVNDLMDASCKTECP TLVKEGSYEDCKDADLVVLCYGNSQKNLTNRLDDIKIATRMVLDTIPKVMENGYDGIILL ATNPVDVISKVVQEVSGLDHNKIVGSGTNLDTARFIQYLAQEVSCNPKDVEAYVLGEHGN SSVALWSNARIKGISIDKFLKNVGDGEKFKEDVLEKIRDKAFKIIKGKGATHFGIANCLV DFTRAILLDEKRIIMASAYLDGEYNNKGLYTGVPTVIGANGCEKILEMDISKKEQEMFDN SCKALEENYKLAQEVLGE >gi|325481212|gb|AEXN01000011.1| GENE 77 67517 - 67732 281 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256545338|ref|ZP_05472702.1| ## NR: gi|256545338|ref|ZP_05472702.1| modification methylase ScrFIA (cytosine-specificmethyltransferase ScrFIA) [Anaerococcus vaginalis ATCC 51170] modification methylase ScrFIA (cytosine-specificmethyltransferase ScrFIA) [Anaerococcus vaginalis ATCC 51170] # 1 71 40 110 110 100 90.0 3e-20 MSKAIYEKSFYKTIDKFKNLAKNSNLSFEQLSDVCEMDEYDIKILIGNENKGFKAENIKK AIKNLENYLNK >gi|325481212|gb|AEXN01000011.1| GENE 78 67955 - 69250 2002 431 aa, chain + ## HITS:1 COG:FN1757 KEGG:ns NR:ns ## COG: FN1757 COG0422 # Protein_GI_number: 19705078 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Fusobacterium nucleatum # 3 431 2 431 433 574 66.0 1e-163 MKYKTQMEAAKHGFVTEEMKIVAKKENVSEEFLLEKIAKGEIVIPRNKNHNSISPEGIGT GLKTKINVNLGISKDLNDLDLEMQKVDMALKMGAESIMDLSNYGKTQEFRKRLIEKSTAM IGTVPMYDAVGFLDKGLSFIKAHEFLDVVRNHAENGVDFVTIHCGINRANAEIFMRNRRV NEIVSRGGSLLFGWMKMNDKENPFYEYYDELLDILREYDVTLSLGDSLRPGGIHDATDPA QIAELITLGELTKRAWEKDVQVIIEGPGHVPINDIEMNMKLEKKLCHNAPFYVLGPLVCD IAPGYDHITSAIGGAIAASHGADFLCYVTPAEHLKLPDVDDVKEGIIAAKIAAHAGDIAK LKDARKWDLEMSKRRQKLDWEGMFELAIDPEKCRKYRASSNPEEENTCTMCGAMCSARNM NLILEGKDIKL >gi|325481212|gb|AEXN01000011.1| GENE 79 69288 - 69953 493 221 aa, chain - ## HITS:1 COG:SP1171 KEGG:ns NR:ns ## COG: SP1171 COG1011 # Protein_GI_number: 15901036 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 3 204 4 207 237 124 35.0 1e-28 MIKAILIDIDDTILDFKKSSKKAFINTIKDFNLTYKDEYFSYFEQINSDLWRDQKLGKIS IKNLFKKRSAMMIEYLGLGEDNNFFTETFSENLSHQAILVDGIEDLLSYLNNKYKLYAAS NSVYKRQVSRLIKANLYNFFDGIFVSDTLGYEKPDRKFFEKIIDQIDFNKNEVIMIGDSL KSDIVGAKNAQIKSIWFSEKDTENKIYNYKVKNLSEIKKIL >gi|325481212|gb|AEXN01000011.1| GENE 80 70191 - 72074 1972 627 aa, chain - ## HITS:1 COG:BS_yvgW KEGG:ns NR:ns ## COG: BS_yvgW COG2217 # Protein_GI_number: 16080402 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus subtilis # 31 627 115 700 702 604 51.0 1e-172 MNKKQKKSLTKIFLSALLLIILHFINFNKYIDFILYMISYLLVGYEVLLNAFNGIKNKQA FDESLLMSIATIGAIILGIYSKSGDYVEAVAVMLFYQIGEFFQSYAVGKSRKSIADLMDI APDYANLEDENGKIIEVDPDEVEIGSIIVIKPGEKVPLDGEVIDGRSSIDTKALTGESIP KDVEKGSMIYSGSINLNGLIRVKTTKEFGESTVTKVLELIEDASERKSKSENFITKFARI YTPIVVYLALALAILPPIISILMGNSGNFSTWIYRALIFLIISCPCALVISVPLSFFAGI GSASRNGVLIKGSNFMEVLSNVDQVIFDKTGTLTKGTFEVTAIHPETLSENELLHIASHV ERYSTHPIAESLRRAYKDENDACKVDDIKEVAGCGISAKVNGDLVYVGNSKMMDKFDIEW KKCQKSGTIIHVAINNTYQGHIVISDTIKENSKKAIKSLKDNHISKTIMLTGDSNDVGQN VSNILGLDDYYSELLPQDKVEKLEEILNNNSNENKKIAFVGDGINDAPSLTRADVGIAMG AMGSDAAIEAADVILMDDDPLKISTAIKISKKCLKIVKENIYFSIGVKIIVLVLGALGFA SMWAAIFADVGVTFIAVLNAMRCMYIK >gi|325481212|gb|AEXN01000011.1| GENE 81 72083 - 72301 313 72 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01434 NR:ns ## KEGG: EUBELI_01434 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 1 72 1 72 72 81 65.0 8e-15 MRKSYKIEVDCPSCANKMEIEAQNTQGVKDCKINFMMLKMKVNFEDGVDEKEVMENVLKN CRKIEKDCEIYF >gi|325481212|gb|AEXN01000011.1| GENE 82 72447 - 72782 348 111 aa, chain + ## HITS:1 COG:FN0260 KEGG:ns NR:ns ## COG: FN0260 COG0640 # Protein_GI_number: 19703605 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 12 101 21 111 125 62 37.0 2e-10 MKLPHKHYQDDDKIDFLIEENKALDISKAFKHLGDPKRLQIFWLLCHRKECVINIAAIMD MSSPAVSHHLKILKMAGLIKSNREGKEMFYEADENNLSEFLFNVILKGKSL >gi|325481212|gb|AEXN01000011.1| GENE 83 72817 - 73071 175 84 aa, chain - ## HITS:1 COG:SPy0775 KEGG:ns NR:ns ## COG: SPy0775 COG2321 # Protein_GI_number: 15674820 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Streptococcus pyogenes M1 GAS # 2 72 228 298 305 72 50.0 3e-13 MYAYYSKEKGYLEKGDIEEAMKAASSIGDDKIQKMSGSNINPDKFTHGSSRDRKNAFDMG YKYHDIEHSMEFFKNLDYQIKISL >gi|325481212|gb|AEXN01000011.1| GENE 84 73164 - 73427 249 87 aa, chain - ## HITS:1 COG:SPy0775 KEGG:ns NR:ns ## COG: SPy0775 COG2321 # Protein_GI_number: 15674820 # Func_class: R General function prediction only # Function: Predicted metalloprotease # Organism: Streptococcus pyogenes M1 GAS # 2 85 109 192 305 117 60.0 3e-27 MWHEKFSEYNLSYNEPQMTLYTGSTKSACGIAQSGMGPFYCPLDQAVYIDVSFYDELKNT FGAGGDFAFAYVLAHEVGHHVQNELEF >gi|325481212|gb|AEXN01000011.1| GENE 85 73799 - 74626 939 275 aa, chain + ## HITS:1 COG:SP1845 KEGG:ns NR:ns ## COG: SP1845 COG0708 # Protein_GI_number: 15901674 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 275 390 67.0 1e-108 MKIISWNIDSLNAALTSDSNRAKMSRDVLDTIIKEDADIICLQETKLPRTGPSKKHKQIL ESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQEARIITLEFD NFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQNKPVIACGDFNVAHKEIDLKHP ENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKYTWWAQRVKTSKINNSGWRID YFIVSDRIKEKIKESDMIDSGDRQDHTPIYINIDI >gi|325481212|gb|AEXN01000011.1| GENE 86 74971 - 75870 1245 299 aa, chain + ## HITS:1 COG:SP1045 KEGG:ns NR:ns ## COG: SP1045 COG1597 # Protein_GI_number: 15900916 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 293 1 288 294 175 35.0 1e-43 MKKCMIIENPNSGDGKNDEYMEGLIDKLENEFDQVVHKKTKKEGDGENFSKNACLEKYDS IFVVGGDGSFNEVINGISKMDYRPKVGLLPGGTNNTYMQLIGGSNDLKEAIDNLSLEKTK KVDIGKCNDRYFSYYVCFGKLIEATTSTDSSEKEKLGGLAYVKNILKTIPSDETSKIQIS YDDKTFESNASLVYVMTVNKVGNLEFSKDDGDLSDGELNVFIMTEEGLMSKVNAAKDMLF GKVDENENVKSFTCKKLSIKNLENKEIELDMDGEVNGKLPCDIEILKKHVEIYLPKSGN >gi|325481212|gb|AEXN01000011.1| GENE 87 75975 - 77168 1317 397 aa, chain + ## HITS:1 COG:lin1013 KEGG:ns NR:ns ## COG: lin1013 COG4175 # Protein_GI_number: 16800082 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, ATPase component # Organism: Listeria innocua # 3 395 2 394 397 429 56.0 1e-120 MSTKIKVKELTKIFGHNPKRAVKLLKEGKSKKEILDKTGLTVGVNRCSFEVEDGELFVIM GLSGSGKSTLIRLINRMIEPTYGDIFIDDENISELDEEGLRNARREKMSMVFQNFALFPH YTILENAAYGLTIKNGKSEKANKKAMEALKLVGLEGYEDQYPDQLSGGMQQRVGLARALA TDTDILIMDEAFSALDPLIRKEMQDELVYLQSEMKKTVLFITHDLNEALKIGDKIAVMKD GSLLQVDTPERLLSHPKNDFIREFVQDVDRSKVLTASNIMIRPDTINIHRHGPKAALSKM LRSGNSSIFVVNNKRELLGYVLAEDASNAYAKGQKNLEAIMKNDMLKIDMDYPLEDIVVD IQDAKIPICVVDGEIFKGIIIKGTVLAALSKDEVDDE >gi|325481212|gb|AEXN01000011.1| GENE 88 77161 - 78003 1046 280 aa, chain + ## HITS:1 COG:lin1014 KEGG:ns NR:ns ## COG: lin1014 COG4176 # Protein_GI_number: 16800083 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport system, permease component # Organism: Listeria innocua # 1 277 1 278 282 288 61.0 9e-78 MNNIPSIPLVGFIDNLVEWLRLHASFIFNPIRDFINFTVELFIKIFSVFPPLLFIILVAA LAYYLTKKIKGITIFSILSLLLIWNLDYWDDMVITLSIVVTSALLAIIIGIPLGIWTSKS ESVEKVIMPLLDFMQTMPAFVYLIPAVSFFGIGMAPGVISSVIFAMPPAVRMTNLGIKEV PSDLVEAADSFGSTPKQKLFELELPMAKPSIMAGINQTLMLTLSMVVVASMIGAPGLGNV IYTSVSRNDVGVGFASGIAIVILAVILDRLTQALSKKNNR >gi|325481212|gb|AEXN01000011.1| GENE 89 78016 - 78903 1186 295 aa, chain + ## HITS:1 COG:lin1015 KEGG:ns NR:ns ## COG: lin1015 COG2113 # Protein_GI_number: 16800084 # Func_class: E Amino acid transport and metabolism # Function: ABC-type proline/glycine betaine transport systems, periplasmic components # Organism: Listeria innocua # 1 293 1 297 300 266 47.0 3e-71 MIKKKIFSIITILAFVLVGCKSNKTDNDKEEVNFDYAPNDYIIGIEPGAGAMDAANQAME DYDLKQKLTTGSSAVMTQMLGDAIKEKAPIVVTGWTPHWKFAKYDLKFLEDPKGSFGKPE EIHTLARKGLKEDKPNAYKLLDNFYWTVDDMQEVLVDLNDGMDVKDAARKWVDNNQDRVK KMYEGVDRSNGEVISLAHVIWDSELCSAYVLKDILEDYGFEVRMMAVEVGPLFAAVAYGS ADVTTSAWLPLTHKNYMNKYGDMVDDLGPNLKSAKIGFVVPSYMEIDSIEDLKDY >gi|325481212|gb|AEXN01000011.1| GENE 90 79118 - 79924 691 268 aa, chain + ## HITS:1 COG:no KEGG:Apre_0991 NR:ns ## KEGG: Apre_0991 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 29 265 56 292 295 249 52.0 1e-64 MKKLVNIIFSIIFVVMLLFSFKSCSFESNDINFLDNIFRKEKTDDMDILYKNIEKHKDDN EKTRWIYENFENLSDKDKYLVGNDIDASEFIYNLRNNDVNFDYYPGESVDYGRNTPYFLQ WDNRWAYNLLGDSNIGFAGCGPTSMAMVLKRLDPNLNISPIDMANDAQTYMSSSGIEWRF FSDEARKYGYNIQSIENNKKSIVDALDRGALIVSVKKGNFTLFGHILVIDSYRFGKFIIN DPNSMKNSEKTWSYGRIKDQIVNIWLVY >gi|325481212|gb|AEXN01000011.1| GENE 91 79935 - 81209 1172 424 aa, chain + ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 9 422 16 426 512 206 32.0 9e-53 MIKKVSYKFLLISIIIGACSGLVISLFRLVIPKIMGLISNLIIFGQENILKSIVFVLIFI FIGFLVSITVNKEPMIGGSGIPQIAGKLNDKLDYSAFSCLVNKIIGGLLSIGSGLTLGRE GPSVQIGGSLGEVMAKKFNLNKDETNVMIIASSACGITSAFTAPVSAMAFALEELMKKTS RINFIYITSTIISSSIVTSLIIGNNPVIKVKNSLNLSIDFWIFLIFLGILVGFSSILFNM GILYGKKVYKKLPISQTIKSILPFFITSLFLLFDQRLLGSGENFIALAGGENVGISLLLY FYFMKLLLLLIAFCSGIPGGIFFPLLAMGSLVGNFYGSVLFNLDLVGQNEILIFSMLAMA AHFSSIVRAPLTGMFLIIEMTGGRIDFFLPIIIVSSVAYLVAENFRNEPIYESLLEIMVK NKSK >gi|325481212|gb|AEXN01000011.1| GENE 92 81365 - 82729 1039 454 aa, chain + ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 1 449 1 448 449 348 48.0 1e-95 MKKKLSFNQTLLVGSLLFGLYFGAGNLIFPIELGQNSGNNLYKVVLGFIVSGVGLPLLGV VASAISKNDSLFEMGKTVSNKFAFIFTTALYLTIGPFFAIPRTSTVAFEVGIASNVSQDK IKIFLLIFSLIFFLTVLAFALKPGKIMDNIGKILTPTFLILLSVLVVLALIKPMGGLGEN QPIEKYGNNPLFVGILDGYNTMDALASLAFAIIIISSIRKLGVKDSNQVAIETLKSGIIC LIAMSTVYVSLAFMSSSSVNIMEIGNNGGIILSNISFHYLGNFGKILLAAIVIIACLKTA IGLIIACSEIFIEMYPNSLSYKTYAITFTLISFLIANLGLQNIISLSIPVLMYMYPLAIV LIFLSLLYTLIGKNKLIFSLTIGFTAIFSIFDFLRALPENISNLNFIQSIIEFAVKNLPG FNLGFGWVIPGLVGFILAIIICIIKKDQIKQINL >gi|325481212|gb|AEXN01000011.1| GENE 93 82795 - 83136 345 113 aa, chain + ## HITS:1 COG:CAC1287 KEGG:ns NR:ns ## COG: CAC1287 COG0537 # Protein_GI_number: 15894569 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Clostridium acetobutylicum # 2 113 3 114 114 145 55.0 2e-35 MDCVFCKIADGEIPSDVIYEDQKVIAFNDLDPQAPIHFLVIPKKHIESLAKLDEEDKDIV SHIFMVIKKITENLNVAEDGYRIVNNTGEDGGQTVKHMHFHVLAKRSLQWPPG >gi|325481212|gb|AEXN01000011.1| GENE 94 83121 - 83390 260 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228003993|ref|ZP_04050977.1| SSU ribosomal protein S21P [Anaerococcus prevotii DSM 20548] # 19 77 1 59 60 104 84 4e-21 MATRLISNLMCDTRGGIEMTEIRVGENESIDSAIKRFKRQCARSGVLTEYRKREHYEKPS LKRKKKSEAAKRKKEENSNLRPNRVFFYL >gi|325481212|gb|AEXN01000011.1| GENE 95 83524 - 84549 828 341 aa, chain - ## HITS:1 COG:SP0615 KEGG:ns NR:ns ## COG: SP0615 COG2348 # Protein_GI_number: 15900523 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pneumoniae TIGR4 # 13 224 12 235 406 82 28.0 1e-15 MHLNLNNKNEVQKYWDFFYKHPSSSFYQAKEWTLIKNNWDIDYFYIEKNGNVVAVAQVLS IYNDKARKKLFYCPRGPVSDLYDVKTNVELINEIKDYARKNDGFLVKFDPNYEYDENLIN KYKEFGIDFCHKMYSYVQFPFSMMLDIKGRSFDEVIQSFSKNGRKQVRKSYRQDLELYVG KREDVKIFHQITADMSNRKGITYRNIDYYYRLFDTYKDNGRMTFVKYKGEFLSCSFLITF NDYAIALYGADNLNVDVGQSYFLDAEEIRYCCNNDIRYYDLGGVKSLDINDGLYRFKRKF TNNNIVKWIGNIECILDKNAYEKFIKEKDHTDFSEDLKSDN >gi|325481212|gb|AEXN01000011.1| GENE 96 84902 - 85981 1143 359 aa, chain + ## HITS:1 COG:CAC0590_2 KEGG:ns NR:ns ## COG: CAC0590_2 COG1985 # Protein_GI_number: 15893879 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine reductase, riboflavin biosynthesis # Organism: Clostridium acetobutylicum # 144 350 3 216 223 155 41.0 1e-37 MNDKYYMKKCFDLAKNARGKTLKNPLVGAVLVKDGKIISTGYHHEYGKVHAEVDCFNNLK ENADGAVLYVNLEPCSHYGKQGPCTLEIIKRNIKKVIISNIDTNPKVDGLKVLREKGIEV QTGLLEDEGKKLNEKFFFNIKYNRPLIALKYAQTLDGKISSNTNDSKWISNEFSREYVHR LRNDYDAIIVGKNTLIHDNPSLNSRIENGIDPVRVIVDTNLEIEKNYKDYKIFNLNSDKK TYIATCKDTDNPDLNLIKCKMKNNHVDLEDLVNKLYEMNIGSILVEGGSILNYDFLEEGL VDKIYEFISPQIIGGFNSKSPFYGRGVDKIKDGYKFEIEDVKRFDDDIMIEAKNVHWNI >gi|325481212|gb|AEXN01000011.1| GENE 97 85962 - 86585 760 207 aa, chain + ## HITS:1 COG:SP0177 KEGG:ns NR:ns ## COG: SP0177 COG0307 # Protein_GI_number: 15900114 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase alpha chain # Organism: Streptococcus pneumoniae TIGR4 # 1 207 1 211 211 166 43.0 3e-41 MFTGISEEMGKILSFKKINDHVQIEIEASLVLEYIKLGDSIMTDGVCLTVTEITDKTYKA DLMNESLKMTKFDNSYVNKKVNLERALRLSDRLDGHIVQGHVDGVGKIKNIRENIFTISA SPEICSLIVKKGSVTLDGISLTVSDDKNTSFEVALIPETLERTNFKYKKIGDEINIETDI INRFIKKSMANKKEERLDKNFLLENGF >gi|325481212|gb|AEXN01000011.1| GENE 98 86591 - 87805 1433 404 aa, chain + ## HITS:1 COG:SP0176_2 KEGG:ns NR:ns ## COG: SP0176_2 COG0807 # Protein_GI_number: 15900113 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Streptococcus pneumoniae TIGR4 # 208 398 2 193 198 242 60.0 1e-63 MEEIIKALRNNEIIIVTDDEDRENEADMICAGENVTGEMINIMAKYARGLICTPIGKNIA KQFDLDMMVQNNTDNHETAFTVSIDHVNTETGISAFERAETIRALADNNTKPSDFRRPGH VFPLIAKDEGVLVREGHTEATVDLMRISNLKEIGLCCEIMADDGHMLKGKAVVDLAKKLG MKMTSVSEIKKYIKENKIDFSKNDENSLEKTNIINLPTDHGNFKAISFYDKIENKEHLAL IKGKVDGENILTRIHSECLTGDVFSSNRCDCGNQLHKAMEMIDENGSGIILYLRQEGRGI GLFNKIKAYHLQEEGYDTVDANIKLGFAPDLRNYKIACLMLKELGVKSIDLLTNNPDKIK QVEKYDIKVNKRVPIEIHSNHIDRVYLKTKADRMGHDLKEFKEI >gi|325481212|gb|AEXN01000011.1| GENE 99 87806 - 88264 713 152 aa, chain + ## HITS:1 COG:SP0175 KEGG:ns NR:ns ## COG: SP0175 COG0054 # Protein_GI_number: 15900112 # Func_class: H Coenzyme transport and metabolism # Function: Riboflavin synthase beta-chain # Organism: Streptococcus pneumoniae TIGR4 # 1 149 1 150 155 196 67.0 1e-50 MKEYSANLVSNGKKYAIVVARFNHFITDRLVEGCLDTLKRHEVKDEEIELVRVPGAFEIP LAAKKLVHKDYDAVICLGAVIRGDTSHYDYVCSEVSKGIANVSLESGKPVIFGVVTTDTI EQAVQRAGTKAGNKGSDAAVSAIEMANLMDLI >gi|325481212|gb|AEXN01000011.1| GENE 100 88261 - 88866 620 201 aa, chain + ## HITS:1 COG:BH0430 KEGG:ns NR:ns ## COG: BH0430 COG0546 # Protein_GI_number: 15612993 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Bacillus halodurans # 3 197 4 212 223 67 24.0 1e-11 MKIIFDFDGTIHKSDEIYEKAFYQTLKKYKIKKPSLDSKSYLGYPPKKIWDDFLDDSYDK EKLIETTGKFMIENMRDFGSLYRDTKKVLNILKKKHELIILSSCPRKYIDTARKIYKLDL YFSKYLIGEDYDYKDKSEIIKINKIDNFIIIGDRKSDIEAGYLNDNISIFAKYGYAKKGE GNLSDYKIDKISDLLKIKALS >gi|325481212|gb|AEXN01000011.1| GENE 101 88920 - 89465 450 181 aa, chain - ## HITS:1 COG:no KEGG:Apre_1455 NR:ns ## KEGG: Apre_1455 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 178 1 181 183 134 38.0 2e-30 MNEELLIDYASQTLANKKLANLFTFKNTDNIDIEKMVYEWNEILNEKNMYVEILKNNHSS AQIYAYRPHKLKYVLNDKKTKSLLRSLGYNTQDLNQCINHLKFRYKIENFPHEIGIFLGY PYEDVMGFIENKGDKFLINGYWKVYYNQDEKIKIFNNYNKIKKSYKILFNRYKNISNLCV N >gi|325481212|gb|AEXN01000011.1| GENE 102 89470 - 89904 677 144 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 1 134 1 134 142 94 41.0 8e-20 MKKIAIVYWSGTGNTEAMANEIAGELKNNDIEIDLFDPNSFTKDSINLYDGFAFGCPAMG SEELEETEFEPMFESIENDLSDKPVLIFGSYQWADGEWMEIWQDRCKNDGINLVRDGLMA YDTPDDEALEECRKAALDLSKAVG >gi|325481212|gb|AEXN01000011.1| GENE 103 90359 - 91213 1143 284 aa, chain + ## HITS:1 COG:FN1840 KEGG:ns NR:ns ## COG: FN1840 COG2376 # Protein_GI_number: 19705145 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Fusobacterium nucleatum # 1 283 5 287 332 303 55.0 2e-82 MKKIINDPNMIIKEMLNGLYKANQDKVKLNEDLKIIYRKDLPIKGKVGLISGGGSGHEPA HAGYVGDGMLDCAICGEIFTSPTPDQVLEAIKLADSGQGVFMVIKNYTGDVMNFDMAKDM AEMDGIKVDYIIVNDDVAVEDSTYTSGRRGIAGTIFVHKVLGAMARDGKSLQEIKAMAEK IVKNIKSMGMATKACINPISGKESFDLSERDMEIGVGIHGEPGVKQEKIKSANEISKELV DHILEDFDNLDGDFVLMVNGMGQTTEMELFVVNNYVNDYLKEKI >gi|325481212|gb|AEXN01000011.1| GENE 104 91243 - 91344 111 33 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSMDMAGFSLTLFKVDDEVLKYLEEKVDVVRG >gi|325481212|gb|AEXN01000011.1| GENE 105 91346 - 91945 865 199 aa, chain + ## HITS:1 COG:lin2844 KEGG:ns NR:ns ## COG: lin2844 COG2376 # Protein_GI_number: 16801904 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Listeria innocua # 17 194 19 193 198 158 46.0 6e-39 MNIDKVKEKIVVIADLISENEAYLTDLDREIGDADHGYNMKKGFTKVKEAMNEDFPNLKA LFNKIAMTLISTVGGASGPLYGTFFMKFAQSLGESEDIDKELFTKAFSDGVDGVIMRGKA KVGDKTMVDVLSPVADALKEDKKFSEIIDIAKENMERTKDIKAIKGRAAYLGDRSIGHID PGACSSYLCIKSALGDLND >gi|325481212|gb|AEXN01000011.1| GENE 106 91938 - 92336 597 132 aa, chain + ## HITS:1 COG:SA0607 KEGG:ns NR:ns ## COG: SA0607 COG3412 # Protein_GI_number: 15926329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 117 1 113 120 73 38.0 1e-13 MINILLASHSRKVVEGLREVLVQMAPDVNIQISGGDNEGNIGSNFEEINEIINKYAKDDG LVIFFDLGSAMLNCQMAIDMLDEEKKSKVYLSGTPLVETSVQVAVNASVGQTLEETIEYL ENYPVNKLDNLN >gi|325481212|gb|AEXN01000011.1| GENE 107 92328 - 93146 785 272 aa, chain - ## HITS:1 COG:CAC0307 KEGG:ns NR:ns ## COG: CAC0307 COG0313 # Protein_GI_number: 15893599 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Clostridium acetobutylicum # 5 269 6 279 282 209 41.0 5e-54 MDYSIYFVPTPIGNLEDMTIRAINVLKSVDIIACEDTRESKKLLNNFDINKKLTSYHKFN EKQKSEEIIKNTKEGITYAIITDQGMPGISDPGHILIKECIENNISYTILPGPSSILTGL IASGFDNDRFSFYGFIPKKSSDKKKLYQELKNENKTSILFDTPHNLENTINDFKKEFPER KLAITRELSKKFEQYQIFKIKDIKNEDITFKGEFVLILEKNLEKENLDITSFKDEILQLK KEGKSTKDIVKSLKKSTSFSKNDIYNYVITLV >gi|325481212|gb|AEXN01000011.1| GENE 108 93136 - 93837 543 233 aa, chain - ## HITS:1 COG:lin0208 KEGG:ns NR:ns ## COG: lin0208 COG4123 # Protein_GI_number: 16799285 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Listeria innocua # 2 230 10 244 250 130 35.0 2e-30 MEKLDYIPKTKLYMKHVDKAYSFGIDSILLANFSKMKKNKTLIDVGAGNGILSLACLSYY NLSNVYGIEIQEKKAEIFNENLKLNSINNIEIINKDLNLTNFPNNFCDYIITNPPYYKKG ANIKNDKEEFLLSRQEIKMNLADIFSFSNKTLKDKGKLFMIHKPERLVDIIKESGNLKLK RIKFVQSKSNEKPVFILLEFVKNANEGLKFEDTLIIYDENGNYSQEVRLINGL >gi|325481212|gb|AEXN01000011.1| GENE 109 93950 - 95290 1751 446 aa, chain + ## HITS:1 COG:BS_ybbT KEGG:ns NR:ns ## COG: BS_ybbT COG1109 # Protein_GI_number: 16077245 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus subtilis # 2 441 3 441 448 409 48.0 1e-114 MKYFGTDGFRGEANQDLTLYHAIKIGRFLGYYFNKEKNGQGKIVIGKDTRRSSYMFENAL SAGITSSGSDAYLLHVTTTPSVSYVVRSEDFDCGVMITASHNPYHDNGIKIINSDGEKMD DEFLEKLEEYIDSDITDIDLKVGEEIGRTHDFIGGRNRYIAFLIQTVSKSFKGKKVGLDC SNGAASSIVKSVYDALGAETFVINNNPNGFNINVDCGSTHIEVLQKYVKENKLDCGFAYD GDADRCIAVDEKGEVVDGDAILYICGKHMKEEGSLESNTVVTTIMSNIGLYKAFDKIGIK YSKTDVGDKYVHLEMSENGYELGGEQSGHIIFSKYANTGDGILTSLRLMEAMIENKTTLS ELRRDLKIYPQVLKNVRVKDKNEVLNDEKIKNIIEQKSEELKDRGRILVRESGTEPLIRV MAEAESEKEANEKVDEIIKVIEDSGL >gi|325481212|gb|AEXN01000011.1| GENE 110 95294 - 95614 374 106 aa, chain + ## HITS:1 COG:no KEGG:Apre_1151 NR:ns ## KEGG: Apre_1151 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 106 1 106 106 126 65.0 2e-28 MKDYLSGKEINIKEAVLVVGNKVYNKSSYISIDTRKLDGYPPKVYYDKNHKLLGKMYDKG VYELDDIEEILLDYSDTCFSNHDLNDLREFLIKKRKNLYENLEKRQ >gi|325481212|gb|AEXN01000011.1| GENE 111 95694 - 95843 245 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227499796|ref|ZP_03929891.1| ribosomal protein L33 [Anaerococcus tetradius ATCC 35098] # 1 49 1 49 49 99 87 2e-19 MADKVKLECTVCKNRNYDTTKNKKNTQERLELKKYCPFCKKHTVHKETK >gi|325481212|gb|AEXN01000011.1| GENE 112 95858 - 96040 318 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696287|ref|ZP_03304415.1| ## NR: gi|212696287|ref|ZP_03304415.1| hypothetical protein ANHYDRO_00824 [Anaerococcus hydrogenalis DSM 7454] preprotein translocase, SecE subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00824 [Anaerococcus hydrogenalis DSM 7454] preprotein translocase, SecE subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 98 100.0 2e-19 MAKKKEGFFKSIRREFKKITWPTKNETLNYSLLVIIVSVITGLLIWLLDIVFGNMLGFLM >gi|325481212|gb|AEXN01000011.1| GENE 113 96048 - 96641 902 197 aa, chain + ## HITS:1 COG:CAC3149 KEGG:ns NR:ns ## COG: CAC3149 COG0250 # Protein_GI_number: 15896397 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Clostridium acetobutylicum # 27 197 3 172 173 163 51.0 1e-40 MTDLSNNNNSNELNNTKEEIDSKDSQKQPRWYVVHTYTGYENRVKDKIQMMIDNEQNPDI IDVTVPEEEYVEVKNESKKLKTRKLFPGYVMVKMNITNRSWYIIRNTQGVTGFVGPDSKP VPLTKREVRKFGIKEDKPVLNIDINVGDNVNIIQGPFKDLVAEIKEIDPEKQIIKALIDM FGRDTIIDLGFEDIETI >gi|325481212|gb|AEXN01000011.1| GENE 114 96704 - 97138 480 144 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227981920|ref|ZP_04029177.1| LSU ribosomal protein L11P [Thermomonospora curvata DSM 43183] # 1 143 1 142 142 189 65 1e-46 MPAKEKEVQAKVKLQVPAGKATPAPPVGTALGPHGINIMEFVQAFNAKTADQAGMIIPVE MTIYKDRSFEFITKTPPAPVLIKKAIGLDKASGEPNKNKVGSIKLDQVKEIAQTKMQDLN AASLEAAMSMIKGTCRSMGITVEE >gi|325481212|gb|AEXN01000011.1| GENE 115 97176 - 97886 961 236 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227499792|ref|ZP_03929887.1| ribosomal protein L1 [Anaerococcus tetradius ATCC 35098] # 1 236 1 236 236 374 76 1e-102 MAKKGKKYIESKKAFDTKKEYDLSEALDIVEKTAKANFDETVELHVRLGVDSRHADQQVR GTVVLPHGTGRNVRVLAIVKDDKVEEALNAGADFAGNEEYTDKIQKENWLDFDVIVTSPD MMGQVGRLGRVLGPQGLMPNPKSGTVTNDIANAIKEVKAGKVEYRTDKNNLVHVPTGKVS FGNEKLSDNLRSLITAIVKAKPASAKGKYLKSITIASTMGPGVKLSPAKAMDLVEK >gi|325481212|gb|AEXN01000011.1| GENE 116 98089 - 98637 603 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228003977|ref|ZP_04050961.1| LSU ribosomal protein L10P [Anaerococcus prevotii DSM 20548] # 1 178 16 193 197 236 65 6e-64 MSEKAIQQKQVIVNEIVKKIESAKSVTLVEFDKMDVKEITDLRNNFRDANTEYKVYKNTM MRFAFQQLGFDQFTEELKGSNALIFSNEEMIDGPKVASKYINQDEANEEKLIIKSGIVDG NYQTPEEMLAIAKLPGQQELASMLVNTLQAPIRKLAGDLSQINAKLVYALDAVREKKENE AA >gi|325481212|gb|AEXN01000011.1| GENE 117 98673 - 99053 381 126 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227372936|ref|ZP_03856413.1| LSU ribosomal protein L12P [Veillonella parvula DSM 2008] # 1 125 1 121 122 151 66 3e-35 MSEKVTNLLEEIKELTVLELSELVKALEEEFDVTAQATVAAAPAAAAGAADAGAAEKSEF DVVLKSAGASKINVIKVVKEVTGLGLKDAKALVDGAPKAVKEGVAKDEAEELKSKLEEAG AEVELA >gi|325481212|gb|AEXN01000011.1| GENE 118 99166 - 99615 473 149 aa, chain + ## HITS:1 COG:lin1791 KEGG:ns NR:ns ## COG: lin1791 COG0735 # Protein_GI_number: 16800859 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Listeria innocua # 23 149 14 143 148 105 40.0 2e-23 MKEIIDSLANVDQEEKYEIEKHILKKHDIRVSHQRLMILDYLVNNRTHPTADDIYKDLKS KDPILSQATVYNTLNLFVKNNIVSELDFNQSRKRYDFYQKHHAHFICEHCGDILDLNFDI DNLKFDGLEGYEINNVDLTIRGICPNCRK >gi|325481212|gb|AEXN01000011.1| GENE 119 99658 - 100368 426 236 aa, chain - ## HITS:1 COG:AGc2846 KEGG:ns NR:ns ## COG: AGc2846 COG3503 # Protein_GI_number: 15888866 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 230 19 241 321 77 25.0 3e-14 MKRNYTLDKYRGFTIISMVLFHLCYDLNLYMDMDWYNNIYINKIWQLSIALSFFIISGIS SNFLTWNNNLKRGIILTILGILISLITYIFVPDQLIIFGVLNGLGLSMILISIIQKYIRI DKRLLLVFIILFIITYKLPSQKILSLNINLSLYDKNLFIFGFPSESFHSTDYFPIIPWFF AYISGYIIGKILIDHNFYNIYGKNSWLSKIGQNSLKIYLLHQIIIYIMVYLFFKLI >gi|325481212|gb|AEXN01000011.1| GENE 120 100454 - 101728 1181 424 aa, chain + ## HITS:1 COG:BS_folC KEGG:ns NR:ns ## COG: BS_folC COG0285 # Protein_GI_number: 16079860 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Bacillus subtilis # 11 420 11 427 430 270 40.0 4e-72 MIKDKDYYLDWIYGRGNSAGKRRDLKAIRSLLKDLGDPQDKIKVIHIAGTNGKGSTANFI ASTLAQTKKCGIFTSPYMEEINEEVRINGISISDEDFFYYIEMIKPICENLNKIGLRNTY FEVMTALMFRYFYDKKVDVCVVETGLGGLLDSTNVVKKPLACLITTISMDHMSILGNSLE EIAKNKAGIIKDNVPVFIYPQNAVAYNIIKKEAKKKNAPLHEFSFDEITIKSQNTGYNQF DFKGYSDVKTSLIGKIQIYNACNAINLLDYFKEDFDLDDNIIKEGIYKSKNPGRLQMIST KPRVLLDGSHNRESFDALLDSLSLFNYNRLIVGFSVLKDKEYKYIIKKLSEISSEIVVTS VDNPRAFEAKELKEIVKKDFSKVRAIENNISAYEYTKSRAKNDDLVLWCGSLYLIGEIIK YESK >gi|325481212|gb|AEXN01000011.1| GENE 121 101979 - 103505 1889 508 aa, chain + ## HITS:1 COG:FN2106 KEGG:ns NR:ns ## COG: FN2106 COG1288 # Protein_GI_number: 19705396 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 8 508 18 518 518 523 57.0 1e-148 MSNLFKKEKKEFKFPSAFTVLFIVLVLASILTYVVPAGSYDRLEYNKEENEFLRTGVGGK EEKLPATQEVLDKLKVTVPLENFVNEDIKKPVAIPGSYHKLDQQPQGFMKVARAPIDGIA DSIGIIVFVLILGGCIGVLNKTGTFDAGIAALSKITKGKEFLMVAILSSIVALGGTTFGL AEETIAFYPILMPIFLASGFDAMVTIAAIYMGSSIGTMFSTTNAFSVVVASNAAGISFKT GIGIRIVSLVLAQAITLWYIYRYSKKVKQDPSNSIVAEEMPRIKDHYLKDYDPDNVEPFN FRRIAMLVIFMLAFPIMIYGVMNLEWWFEEMSTLFLVVGILLIILSGLSEQEAVGAFLDG SADLVSVALIIGVARGINIILDDGMISDTMLFGASNIISGINGVLFSTVQMILFSFLGIF IPSSSGLATLSMPIIAPLADTVSLGRDVVVSAYNFGQGWMAIIAPTGLILATLEMVDVSY NKWIKFIAPLMGILLVLSIVMLGLQTVL >gi|325481212|gb|AEXN01000011.1| GENE 122 103519 - 104730 1545 403 aa, chain + ## HITS:1 COG:BS_pepT KEGG:ns NR:ns ## COG: BS_pepT COG2195 # Protein_GI_number: 16080943 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Bacillus subtilis # 1 394 5 402 410 423 53.0 1e-118 MLENFLKYVSYNTQSDDKNESCPSTPGQIELAKVIVEDLKKLGIDNAHMDENGYVYASIE GTVKDIPTIGFISHMDTALELTGEGVNPQIIDSYKGGDIVLNEKYKLIEEEYPFLKELVG HKLVTTDGTTLLGADDKAGIAIIMEVAKFFMENRDLKFGDIKIGFTPDEEIGRGADLFDV QKFAADFAYTIDGGPVAELEYENFNAATAKIHIEGKSVHPGSAKNVLINALLVGQELNSM LPVNQRPEYTEGYEGFFMLDEMNGTSAEVDIVYIIRDFFKDSFKDKKELLEKIVNFLNDK YGKIIDLEIVDSYYNMKEKIEPCMEIVELAKDSIKKEGMDPIVKPIRGGTDGASLSYKGL PTPNLFTGGYNFHGRYEILSVDIMEKSYQVLKNIILMNAEEAK >gi|325481212|gb|AEXN01000011.1| GENE 123 104730 - 106130 1822 466 aa, chain + ## HITS:1 COG:FN1408 KEGG:ns NR:ns ## COG: FN1408 COG2195 # Protein_GI_number: 19704740 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 1 466 9 489 489 375 44.0 1e-104 MEKLQEQRVFYYFSKLMEIPRPSGHEKEVSDFLIETGKKLNLETYQDENLNVVLKRKASK GYENAPKVIIQGHMDMVASKTEDSKHDFLKDPIIPVIDRKYLTAKDTTLGADNGIAVAMG LALLEDKNYEGPQLELLVTTEEETSMAGAINLADDVLEGDYLLNLDSEEEGILTVGSAGG LTFFVEEKIELEQERDGYEMKVSGLLGGHSGMDINDNRGNAIKVVSFILENLKSDLSLGE FNSGTLDNVIPSLASFKIYGSNIDELEKAKEKALDEFKNLKGDLKIEINEASGKSYSKDL SDKIINMIEKTPSGINTMMDDNTTVESSDNLAFVKEEDGLIKSEISLRSSDNDVLDKLKN KIKTILENLGINFKIDSLYPGWEYKEDSKLRPLAQKVYKKLEGKEFETIVIHAGLECGAL YEKYPNLDLISIGPNIKGAHSPKENVEIESVQRVYEYVKELLKEIK >gi|325481212|gb|AEXN01000011.1| GENE 124 106212 - 106466 243 84 aa, chain + ## HITS:1 COG:no KEGG:CCC13826_1068 NR:ns ## KEGG: CCC13826_1068 # Name: not_defined # Def: addiction module antitoxin # Organism: C.concisus # Pathway: not_defined # 1 83 1 84 84 67 46.0 2e-10 MRQIRLIVDDKVKKQAKSVCNDIGISLENAIIIFLKKVARENKIPFDVSKDLFYSKENIT YLEEKFNEYKSGKANLIENNELNE >gi|325481212|gb|AEXN01000011.1| GENE 125 107247 - 108380 1236 377 aa, chain + ## HITS:1 COG:CAC2237 KEGG:ns NR:ns ## COG: CAC2237 COG0448 # Protein_GI_number: 15895505 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 3 366 2 367 380 405 54.0 1e-113 MRNNNKIAAMLLAGGQGSRLKALTKEMAKPVVPFGGKYKIIDFALSNATNSEIRDIGVLT QYKPQLLNKHLGIGAAWDYDRNFGGLRILTPYYTEEGGRWFEGTAGAIFVNINYLDSIDP EYVLILSGDHIYKMDYTKLLEEHTKKGADATIAVMEVDWDEASRFGIMNTDDEGRIVEFE EKPENPKSNLASMGIYIFNWKVLREALIEDHKNPESTNDFGHDIIPYLLNNNRNLFVYKF DGYWKDVGTVKSYWQANLDLIDPENPLNIQDDSWKIYTTALNLPPHRIGSKGILNDALIN EGCIIDGEVNNSVLFSNVKVEEDACVNNCVILSGVTIKKGVKVYNSVITEDMEITKNIGD KNSTSVYLVSKDGIEEE >gi|325481212|gb|AEXN01000011.1| GENE 126 108382 - 109497 978 371 aa, chain + ## HITS:1 COG:BH1086 KEGG:ns NR:ns ## COG: BH1086 COG0448 # Protein_GI_number: 15613649 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Bacillus halodurans # 30 366 29 364 368 196 33.0 8e-50 MQNILALIYSSEFDEKNYDTLCKIRPDYMLPFGCRYRIIDFTLSNITNHNISSVILYGGE PLRSTLDHVGDGRNWELNRRSGGLMINPPVYNRSRLANEIETYYNTMKHFIDNKRQYIYI TNPMYISKVNITDAYEKMEEENLDALIFTQTKKDDYGYYLNRRIINTDENGYPSSVGINL GLEEEINLFTGSLLIKKDIFMDLLRYSIEKNNATNILDALFKYPKNKSLGLYKSKESLRV IMDTLTYFEASLDLLDRDYFDEIFYKQGMVYTKSKDEPSTEYLRGSKVRNSLVANGAIIE GDIENSIIFRGVKVKKGAVIKNSIIFQNSEIGEGAILNHVITDKDTKVFEDVKLFGNRTH PYLTDKGEHIK >gi|325481212|gb|AEXN01000011.1| GENE 127 109508 - 110938 1708 476 aa, chain + ## HITS:1 COG:CAC2239 KEGG:ns NR:ns ## COG: CAC2239 COG0297 # Protein_GI_number: 15895507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Clostridium acetobutylicum # 1 474 1 476 477 481 52.0 1e-135 MKVLFLTSEADPFIKTGGLADVAGSLPKELVEKGVDIRVCMPLYSSIDQAYRKKMKKIKE FYVDLDWKHQYAGVYSLKWDNVEFYFIDNLEYFDRPSAYGYDDDAERFIYFSKAATLLGK EIDFKPDIIHANDWHTALVNIYVNDFRKGDEFFDDVRCLFTIHNLKYQGVFDSGYLTLTG LDGYYFNEHDLKYFDAINFMKGGIVHSTAFNTVSENYADEIKYPFYGEGLDGVIREYQGK LSGIVNGIDYDVWNPKTDKNIYENYDLNTLDKKLENKTNLQKEYGLPVNPDVPMIAICSR LTSMKGFDLVRYILDELLQEDIQLVVLGTGDYTYEEMFKYFEWKYPDKVASRIYYDGKES HKLYAASDLFMMPSISEPCGISQLIAMRYGSLPIVREAGGLKDTVKPYNKYTGEGTGFSF ENINAHELLFASKNAIDLYKNNKEAFKKLIENAMNEKNDWEESSKKYIDLYESIKA >gi|325481212|gb|AEXN01000011.1| GENE 128 110941 - 113181 1736 746 aa, chain + ## HITS:1 COG:L99884 KEGG:ns NR:ns ## COG: L99884 COG0058 # Protein_GI_number: 15672682 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Lactococcus lactis # 16 742 16 785 800 273 28.0 7e-73 MKKVNNFILKRIQNFLYSFYAKDVEDARINEIYDGLVKALLQDIGKNWSDSKKYYEGKEL YILSFEYNPGKFLSSAIKSLNYEKEVNQCLSILGLSMDDLIAYEREASLGNSEIGFGSWY LAKELSKNKIKSISYALRYESGGMKQKIIDGSQFINSNEWLYKGNKWEHKKAFSYIIKME NKQLKSVAYDMPIFNEENDYVNTLRLWKAESINKINYLNNTSGDLKNFYNDYIDNNSLTQ FLYLDNSTYEGKLFRLKQEYFYSVSSVQDILRRYFKKEDDIRKIDKKIKVIISDIHPSLA ILEFIRCLNVGYGLELDECVKLSKNIFNHIGFLLTPDSREYYDIEMIKLIDESMYDEIIN LDKYCKDNLDLNIIENQQLRYDRVNYCFVGKYFYLSKTFVENYKIDYKKFSYINFGIDRD MYSSSNNINLENVLNNYGIDIKNDVSLEKLNNLKNNSNLVDDLEEAKCKNKLSFIESFDL DKNKSLNPYSIFDMQLTMFHEAKRQLLNAINIASIYYMLKENSNISISPTTYIFSGKAND GYYMAKEIIKFIFALKHMIDKDRLIKEKIKIIFIEDLNVEKLKLIYPACDVYSNLTLPIF DNQSFEMMHSIFNFSNAISTKGGVLSNFNKENKIYTFGKTYDELVRTQKTYSANDFYYKN DIIKITVDNLINEDYNNLPYNFKNIFDYIISYNDSFLIFKDNKDLLDTRLKLGKDYLDKR KWINNEISNILWAKEFNLDKNLEILK >gi|325481212|gb|AEXN01000011.1| GENE 129 113187 - 115073 1774 628 aa, chain + ## HITS:1 COG:TM1845 KEGG:ns NR:ns ## COG: TM1845 COG1523 # Protein_GI_number: 15644588 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Thermotoga maritima # 10 557 222 779 843 379 40.0 1e-104 MTYKYEEIKDIKMGANYNKNFTEFRVFAPNREKIELLISDDYRKTRKEKFSMVKEDYDIF YCKIERDLDGYFYSYLVEDMYEVTDPYSTASSINSLMSAVIDFKKTNPKGFNKSYKKNLE NEAVIYELNVKDYTSNKNSGVKYRGKYLGLSEIETNFCGQSTGLSNIVDLGITHIQLMPI YDFITTFEEDEKFFDDDNYNWGYDPELYFNVEGSYSTNPYNPSRRIYELKKMIKTIHENN INVIMDVVFNHTFKTKDSNLEILAPGYYHRKNKDGDFSNGSGVGNELASERPFVRKLIID SLKHWVLEYDIDGFRFDLMALIDIDTIKIALKELKKIKPYIMIYGEPWMGGESALPIDKQ ILIGSQKSNGFSVFNDRYRDAIKGDNNGYSKGYIQGNFFLKNQIETGIAGSIFYDEKRNG FADDASEVINYFNCHDNLIYYDKLKISLNHDDDINLIAKLGFAILFLSFGKPFIYEGNEF NNTKLNNSNSYNSSLSVNGVNWQDKIDNLEMFEYVKDLIKLRKKLKIFNVIKSSEIKKSL TFIENLEDHIIAYKIKNRDILVYIVINALDKEIYIDENLKNKIFEGEKDLVKIFNQKGII NERLDISEVNYLGKKSANVYIRGEKNGL >gi|325481212|gb|AEXN01000011.1| GENE 130 115063 - 116754 2249 563 aa, chain + ## HITS:1 COG:SPy1503 KEGG:ns NR:ns ## COG: SPy1503 COG1109 # Protein_GI_number: 15675406 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 564 564 606 52.0 1e-173 MDYKKIYEDWLNNEFFDKDTRNELKKIEDDEAEIEDRFYQELAFGTAGLRGKIGAGTNRM NQYTVAKATQGFADTINEMGEEAKEKGVVICYDVRHRSDEFSKISSEVFAANGIKVHIFK DIQPTPVCSYAIRKLKAIGGVMVTASHNPREYNGYKAYGSDGSQILEDTAVKIQNYMKEY DDYSKIKRVDFDKAMGEGIISYIDDSLIEDYVKEVLACTINEDIDKDVKIVYTPLNGCGN KLVRRILDERGFKNIYIVEEQENPDPDFSTVGYPNPEDPKAFKLSEELGKKVDAELLLAT DPDSDRCAVEVKDENGNYIFLTGNQIGSLLSNYILTALKENNSLPKDGAIVKSIVSTDLV KPIAKSFGVNVYEVLTGFKNIYEVANEFEKVGKGEFIFGFEESIGYNYKTFVRDKDAVNA AMLISEMTAYYKKKGESLLDVLEKIYEDYGYYSNEVQSIVLEGLDGAQKIKRIMESIRKN PIDQFIGLKVKKIVDYQFDDTGLSKSNVLKYFLEDNSWFVLRPSGTEPKIKLYLNLIGES EEKAEDKKEKLKAEVNKIIDKID >gi|325481212|gb|AEXN01000011.1| GENE 131 116905 - 117408 413 167 aa, chain + ## HITS:1 COG:CAC0504 KEGG:ns NR:ns ## COG: CAC0504 COG1716 # Protein_GI_number: 15893795 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Clostridium acetobutylicum # 26 161 20 158 159 79 35.0 2e-15 MDQFFNFIDKVFSIQVFGNMTLYQLLSTIFKYVFVVIVLYFIYSIIRIIYYDVRYAVKKE QISDTYLQFINQNQEHKFKVQEYYYIGENNTIGRDDRNSICIKDKFLSSFHARIILDNGI YFLEDLNSSNGTYLNDERINEAIELKNKDIIKFGELKFLFINGDEDA >gi|325481212|gb|AEXN01000011.1| GENE 132 117401 - 117820 250 139 aa, chain + ## HITS:1 COG:no KEGG:Apre_0875 NR:ns ## KEGG: Apre_0875 # Name: not_defined # Def: cell cycle protein # Organism: A.prevotii # Pathway: not_defined # 10 124 9 123 422 100 56.0 3e-20 MLKKENKNILNQKKYKAKALFLLFVFEFLSLSLSMIYNADKLKGGDFYAYVAILAITIIS TVLANKLTRSDSILLLIVNMLFSIGVVMIYRLDPALGKKQLLFYFIGVIVFFTTYYILPK NKNWDDHIVFTLWYLLFCL >gi|325481212|gb|AEXN01000011.1| GENE 133 117796 - 118671 657 291 aa, chain + ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 19 273 171 437 469 186 36.0 4e-47 MVSIVLFVATLIFGFASGGAKNWITLGPISIQPSEFIKIPFIFFIASFYTNYNKYKKKAF GKYYLSIGIYIFILMFFIQKELGTALIFFGTMILTQFVYERDRKLIFVNLILVILGAILA YFLFSHIRVRVETWMDPWSVIDDKGYQITQSLFALASGGLFGTGIGLGRPDYIPVAESDF IFPAICEEYGIFMGIAVVLLFLILVYRAIKVSLQQENKFYSILAFCIGVLFALQTLIILG GVLKLIPLTGVTLPFISAGGSSMVSGFILLAILQYCGQNLENGDENEKEKR >gi|325481212|gb|AEXN01000011.1| GENE 134 118652 - 120157 1820 501 aa, chain + ## HITS:1 COG:CAC0506 KEGG:ns NR:ns ## COG: CAC0506 COG0768 # Protein_GI_number: 15893797 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 45 474 11 460 482 278 36.0 2e-74 MKKKKDKQKPFIQKILEMEKKQRLKDEENVHILEKSTMNKRLIYVMILFILMFLFIVLYL VYFQLFKAESLSENSHNKRLWVNENVIKRGNIYDRNGNVLVYNEKDENGNSFRVYSEGKV NSAFTGYNSVKYGKSGLEKTYNKELLNISDQPTSKIRDMVEKTGVGNNLNLTIDQTIQEI AYNSLGNHIGSIVVMDPRNGEVLAMVSKPSYNPNTLDEDWDLLIQDTDAPLLNRSSQGIY RPASTMKIVSADTILRSGINTNFNDTGSVTIQNYKITNYGDYSYGQVNLRSALMNSLNTY FASKINQIGKDKFKKVTEDYMFNKNYKFDLEKVSPKIPFDDLNQVDTAMTAFGYGKTKVT PLHMAMIASTIANNGKMMQPRLVRNVVNKDGKVIKESKSEVISDVTSTEIANTIRDYMVD VVNYGTAKAAYLQSVQIAGKSGTVDKRGGGVDGWFVGFAPAYDPKLAFAIVVEDTDELAG EVAVPIGGQMINNIVNNVNLY >gi|325481212|gb|AEXN01000011.1| GENE 135 120203 - 120988 478 261 aa, chain - ## HITS:1 COG:BH2848 KEGG:ns NR:ns ## COG: BH2848 COG0061 # Protein_GI_number: 15615411 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Bacillus halodurans # 15 202 13 204 265 127 37.0 2e-29 MTKIINIFNNKSRYSKNIYNKTKSILNDFGYEVSSNYNPNACLNLVIGGDGTFLNAVKNS KFSTIPFIGINTGHLGFYQEVSPDNIEDFVKNFSEKKYYIEKLPMLESRIGRNQINAVNE VVVKSNRNQIVRLRLFIDGNFIENFSGDGLIISTPHGSTAYNLSSNGAILHQSLEGFQLT PIAPVFSSLNRSLKSPIILPKNAEIEINVSKRDNYHTVFLFDGNEFKSNNFKITTKISNK ELKKLILNKNHYWTNIKNKLL >gi|325481212|gb|AEXN01000011.1| GENE 136 121055 - 121849 241 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 14 263 22 273 285 97 29 6e-19 MDKLEFEIKEKINLKELLKSKKISNRAYKKIINNLVYVNDEKINKNIGLKAGDKVKILIE DENLNYEPINKKIKILYEDKDIVAVDKPPNLTVNSKNQESLSNYLAYYFKENKIKSQIRL INRLDMNTSGIMLVAKNPFSHAYYQNQIENNELDKEYLALVEGNLIIDDFCEIDIDYDKE NKKMKVVSDKNHVKTYFKTLKNYGKFSLIYCKIYTGKTHQIRLSLAYLNHPILGDDLYGS KYDIERFLLHAYRIKFKSFRDQKK >gi|325481212|gb|AEXN01000011.1| GENE 137 122202 - 122777 1059 191 aa, chain + ## HITS:1 COG:no KEGG:Apre_0879 NR:ns ## KEGG: Apre_0879 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 184 1 181 204 118 52.0 1e-25 MSIADYIESKAQRKQREIKYEIWKVKNHDSRMRAQGALVGALAGVAAGLFLAPKSGKDLR KDIKDSVDNTVNQVKDSTNDLIENAKDSYVDFKDRAYTELEPIEEGFEEGKKVLKDTVEK TKANAKENAKDVKEEAKKLKEDAKDVKDAAKDGAKEAKKDIKEGKEEVKDVADDTKKKAG EVKRAEDKKNK >gi|325481212|gb|AEXN01000011.1| GENE 138 122788 - 123231 631 147 aa, chain + ## HITS:1 COG:no KEGG:Apre_0880 NR:ns ## KEGG: Apre_0880 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 147 1 147 147 113 57.0 3e-24 MVTINLRLIADVILLLVGIIAIIFLALFLKKASGLVDSIQKIVDKNEKNLDGVIDKLPAL VDQANILVDNVNGLVSDPNLKMAISNANLAISNVSDITVDVKDTVNYFGESVVDTTDTFG EGIASINDYASLIMDVFDIVKSVISGR >gi|325481212|gb|AEXN01000011.1| GENE 139 123279 - 124289 1378 336 aa, chain + ## HITS:1 COG:CAC3037 KEGG:ns NR:ns ## COG: CAC3037 COG1609 # Protein_GI_number: 15896288 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 5 333 4 334 334 199 39.0 5e-51 MAQPTIKDVAKLAGVSISTVSRVMNDSKPVSPEARKKVLDAINKLDFKPNELARSLVMKK SNLIGVIVEDIGIEYMAQLIRGVEEIGHLYKYDIILSSTYGDDNALENAIDFLSTKQVEG IVVISEDISPEILVKLRDNKIPFLLLDKLHEFKKINTVKIDYEKEQYKLVKHLFNQGHEN IAYVTLKNHNHLTDTKISGYEKFIKENNLKSIIIEADGKNSDDGYNIGEEVISQAKSENI SAISFYNDQTAVGFISYCLDNGIKIPEDYSVVGFGNYEISRVYRPKLTTVSIPNYDIGAI GIRALIKRIRGEEDILENNWILDAQLIERDSTKSIS >gi|325481212|gb|AEXN01000011.1| GENE 140 124342 - 124602 500 86 aa, chain + ## HITS:1 COG:BS_crh KEGG:ns NR:ns ## COG: BS_crh COG1925 # Protein_GI_number: 16080527 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus subtilis # 1 81 1 81 85 72 49.0 1e-13 MAERKIVVTNETGLHARPAASLVQFVKNYPGDVKLVKDGKEANAKSIFNVMSLGISKGTE IGIIVEGEDEEAFADKLADFIDNLSE >gi|325481212|gb|AEXN01000011.1| GENE 141 124663 - 126372 1991 569 aa, chain + ## HITS:1 COG:lin1002 KEGG:ns NR:ns ## COG: lin1002 COG1080 # Protein_GI_number: 16800071 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Listeria innocua # 1 568 1 569 572 465 44.0 1e-130 MSEKLKGIIASNGVAIGKLFLFNKEELVIDKLSIQDGEKEDNIKKVDQAIDAYFKDLDFK ENNEENEEVLNIVRAHKELLQDPYFSDTIKEKIQNENKNAELATSETVEQMVMVMSALDD EYLKERADDYKDIGFQVLCKIKNIVPKDLSKLDEECIVISKELTPSDTSNMDKEKVLAFA TDLGGKTSHVSIIAQNLDIPALVGMQDISTKIKGDELAIIDGNQGLLIINPSDQEVSEYK EKIEKEKEERQRLEKVKNLEAKTLDGKVCEVSANIGNLADLEVAIEHGCDGVGLFRTEFL YMENDHFPTEEEQYQVYKKATQMLGEKPLVVRTLDIGGDKGLDYYDFPEEENPFLGYRAI RFCLDHQDIFKAQLRALLRASAFGNLKIMLPFVISTDEIKQTRAILEDLKKDLDKEGIAY NKDIDLGIMVETSASIIMADKLIKYSDFFSIGTNDLTQYTLACDRGNENISDIYNNFNPA VIRSIKHVIDESHKAGKWTGMCGQFASDTKATKLLLGLGLDEFSGSASKLPKVKDIIRNS NFKEEEKFALNILDLEDVKDIEESVEKHN >gi|325481212|gb|AEXN01000011.1| GENE 142 126384 - 127292 788 302 aa, chain + ## HITS:1 COG:no KEGG:Apre_0884 NR:ns ## KEGG: Apre_0884 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 302 3 298 298 219 44.0 9e-56 MNDKSLKIIKRTKFFIDKIDRIKVIEDISSNKIRVKVDDISYVLGLYNINDYDNLKNEEK INNYLKEIDLLDTLDLFEIGIMPDINKSYKVFEYRNEISLGEYLDRISKEEAYKIGSKFG RILKNIHIKKIDKNNNLDWYKNVETKVNFLLYRHGLNKVHDNNDYILVDYLMNNKYICKN TTCNPLYQNISYKNIRIFDKDQIDIRGLKEIKVGDGVSDFVNINKIAIKHPDFAIGVIKS YHGNDVISRKFYRLLSFYQAYFILQSLVDIRDNKKSYLSEFEIEKILNMYDNFSEIIPSW IR >gi|325481212|gb|AEXN01000011.1| GENE 143 127410 - 128261 740 283 aa, chain + ## HITS:1 COG:TM0177 KEGG:ns NR:ns ## COG: TM0177 COG1284 # Protein_GI_number: 15642951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 1 277 1 277 283 151 34.0 1e-36 MGDKIIKTINISVNSILIAFGMYFFLVQHKIASGGVTGISLIFANWFSFFTVGQWSLFLN VILFVLAFLLMGKEFGYKSVLSALLISLSLMFFEKIFPDTVFTNDIVINILFGAGIVSFA LSRIFFNNASSGGTDIVAAILNKYFNIALAKCLFFIDSMVVLMAVKEFGIEMAMYAVLTV IIQSFGFNYFIQGLGRKIAITIISDYSDEINSMILNKYERGVSLYKSEGGYSHKERDILL TVVPFRKYIPIRDDILKIDKNAFVFTHTISEVLGEGFTYDVFN >gi|325481212|gb|AEXN01000011.1| GENE 144 128474 - 129082 499 202 aa, chain + ## HITS:1 COG:FN1042 KEGG:ns NR:ns ## COG: FN1042 COG2996 # Protein_GI_number: 19704377 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 8 190 88 270 281 93 35.0 2e-19 MPCIEIKKNGAYFLYQDNIKLLMPASEKTYKIIKDMTYPVGLYFDNQNMPILTSKIRDLL SNEHNFKENDIVEGRIYSINKHIGAFVAINNQFDSLIRINELKGVHIEGELMKLRVKEVK DDGKIELSNRKRSYLEIDDDSKKILYYLEENDGTINLGDKSSPDKIYKVFGFSKAAYKRA IGKLYKEKYIRIYPKKIELLER >gi|325481212|gb|AEXN01000011.1| GENE 145 129084 - 129830 920 248 aa, chain + ## HITS:1 COG:CAC0279 KEGG:ns NR:ns ## COG: CAC0279 COG0760 # Protein_GI_number: 15893571 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Clostridium acetobutylicum # 5 245 2 245 247 148 38.0 1e-35 MTEKQNEILAEVNGKKISQKDVVSFITQMQGGQQFLNPQGIHQIADELVNQELMYIDAIE NKLDQDKEFTDQVKLTKENMLKNYAMHLLFKDIKVSDDELKEYYDNNKEVIKQPKTYKAS HILVDSEDEANKILEEIKAGLEFEKAADKYSTDKASKGGDLGEFPQGAMVKEFEEALDKL NEGEISKPVKSQFGYHIIKLDHTHDAHLPEFDEIKDRIHDTLLMIKRQEKYLEKTNKIKE KVDVKKYY >gi|325481212|gb|AEXN01000011.1| GENE 146 129842 - 129970 204 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696250|ref|ZP_03304378.1| ## NR: gi|212696250|ref|ZP_03304378.1| hypothetical protein ANHYDRO_00786 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00786 [Anaerococcus hydrogenalis DSM 7454] # 1 41 1 41 361 64 100.0 3e-09 MENSNYPNKLKSIAKDLSEYIKVIDDKKSLIKFVLSKAKEKN >gi|325481212|gb|AEXN01000011.1| GENE 147 130153 - 131241 596 362 aa, chain + ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 61 357 186 485 486 70 24.0 4e-12 MLEEKISNFDILLTNNFINDYNRDFSILRSVIRSKNIINLNLNESNCIAESFASYTLSTV EIPIERTEISENKFLEENYIYRISLNDVVGNNYTADINNVFKNSTKMLMTFLRKIKSKVD LDVIEIKGGAKFDSIPYISYVDIACKKEFENDLLDVFNLFVSEYLSTNLRIEPNLKFEIE KINSLKFYPMTQESYEHISSFVELALNGTYSVDSNTKTAISSSTLARSSTSSNKLNIVMI FRSLSEESLNQMIEKTKLASNINGGKFINRLEIPSWQNSNDELSKIFKSTYDYLFKSNLE IIKTQYSLDCNLIFYKFDVNMISIGVKYKQVDIKKSACDFKDILKTFSLIKEVLFRLNKS LE >gi|325481212|gb|AEXN01000011.1| GENE 148 131244 - 131600 525 118 aa, chain + ## HITS:1 COG:no KEGG:Apre_0889 NR:ns ## KEGG: Apre_0889 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 118 1 117 118 92 48.0 4e-18 MSKKFEIHGHDIEFEKNEGKAIIELQLGENPSECYLIDIFSVDGIDYIALVDSENSELII LLYELDDEETGEIRLNSLEDEEQLDQIYHLFSHYWDYDTIDKIVNEYEYDLENRDIDD >gi|325481212|gb|AEXN01000011.1| GENE 149 131593 - 132549 764 318 aa, chain + ## HITS:1 COG:TM0515 KEGG:ns NR:ns ## COG: TM0515 COG1242 # Protein_GI_number: 15643281 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Thermotoga maritima # 7 282 3 275 303 224 41.0 3e-58 MIKDLPYFPISEYYKTKYGQKVYKLPVKLSLTCPNRDGERSNLGCIFCSESGGSFENLPS YMTVDKQLETNKNYIGNRYKAKKFIAYFQNFSNTYMEYDKFVEVIEACDKEYISAISIST RSDCMTYRKLEFLKEFSKKTGKDIIIELGLQTANYKTLKILNRCEDLADFIRACNMINEY GFRICTHVILSLPWDDDQDIVETARIINTLKVKEVKIHSLYIIKNTKLEKMYKNNEIVMP SKEDYQKNVILFLRHINKDIAIQRLVGRAPKEDTVFCNWDTSWWLIRDEIIKYMNENNIL QGDLSIQREYKKLKGEMK >gi|325481212|gb|AEXN01000011.1| GENE 150 132546 - 132974 592 142 aa, chain + ## HITS:1 COG:no KEGG:Apre_0891 NR:ns ## KEGG: Apre_0891 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 142 1 142 142 154 61.0 1e-36 MIYLVLGPSGSGKTKWLIDQANDEKGKGNANIVFVDSDNEQIYSLDHSVRLIDASDFFID SVESFRGFIAGILARDYDIGKIYIDGIYDIVDINSENIEKLSDSLTKLSNECKVDIYLGL DCKASDIPESLDAEIHETKLLD >gi|325481212|gb|AEXN01000011.1| GENE 151 133011 - 133550 389 179 aa, chain + ## HITS:1 COG:no KEGG:Apre_0892 NR:ns ## KEGG: Apre_0892 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 179 6 181 181 159 64.0 6e-38 MLDDIKKLETFNKWRKESIDLLTEKKICKNEFLEINYEYLVKLDLKPFSNISTVLEAVYN YQYYNIMAKRSNQIALNLISKKKKKYQQEINNRENYYYLKDIATEKLLELIDYKDIEAYY IKLKSKRLTGEIFEIYIKDYDKLILHSKNKNLLKKLQDKKCFLEEAKVSMIDSYVNKSY >gi|325481212|gb|AEXN01000011.1| GENE 152 133553 - 134509 848 318 aa, chain + ## HITS:1 COG:CAC1015 KEGG:ns NR:ns ## COG: CAC1015 COG0564 # Protein_GI_number: 15894302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 2 313 1 316 318 167 35.0 3e-41 MIEVKINENDSNQRFDRFLRKYFKNAPLSIIQKNIRKKNFKINDKRAKKDDLVKKDDIVK MYIKDEDYHKWVRKDDFKASDFNLDIIYEDENIIIIDKKSGVLSHAASSSDYGKNLVDQM TSYLYKTNKVNSRDLTFRPSIVNRLDRNTAGLIIGAKNTKALRALNEAIRQGKIYKYYLT LVEGEIKKDFIVDTNISKYENKNMVKGNKGGKRIITKFYPLESKNNFTLLECELITGKTH QIRYSLHKNSTPIIGDRKYSKSKINYKKINLNSQALLAYKLVFGKIKDLNYLENKGFISK QVKEIERLKEEVFNEGFN >gi|325481212|gb|AEXN01000011.1| GENE 153 134490 - 136121 659 543 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|39938628|ref|NP_950394.1| ribosomal protein L13 [Onion yellows phytoplasma OY-M] # 1 539 1 540 546 258 29 2e-67 LMKVLINKEIINTDKKILCELVKQLYPNDYKKYVLSNVNGKIEDLNYELSANDEIYLIDK SSHISNLTYESSIALVCILAIKKIYNNIKVNVEYSVNNCLYLSIDNFKILHKDLSKIKIE MNNIIKSDISFLRKFYTKDEALKIFKKSNQLDKYNLLNSVDIDEFSVYEIFGQYFSFTNF LCPKSSWIEDFELIYYYPGILINFKKNKDSKLLDFKEQVNIPKIYERSKKWTNLLGINYA SDLNNLVKNDKIESLINVNETYYNNQLGKCAKEIISNDMNIVMLAGPSSSGKTTTAKKLA IQLAVLGKDAFVISTDDYFVDRNKTPLDENGNKDYESIDAIDLHSLNEDLLNLLEGKEVI LPSFNFIKGIRTLSNKKITMKENTVLIIEGIHALNPKLTDYIPEKNKYKIYVSVLTGINI DSTNRISSTETRLIRRIVRDNKYRGYNTLETLKSWEKVKYGEEKYIFPYQNRADFYIDSS LIYEYNALKKYAMECLKQVSQDSTYYYMVDRLKNILLYFVNMEDTKIIDDHSILREFIGE DND >gi|325481212|gb|AEXN01000011.1| GENE 154 136114 - 137016 417 300 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 296 7 317 323 165 31 2e-39 MTKTIGLDIGGTKIQGAVIDENGEILKTYRLETCAREGKDKVLDNISKIIDFLKTDEIEA IGVGTPGFIDSENGIVTFAGNIDGWTGLNLKEELEKRSSLPVFVENDANIALVCEKWLGS GKGFDDIVMITIGTGLGGAVYNKKMGLLSGSNFQGAELGHVILHPNGEYCTCGQSGCAES YCSGTAIVRHYEELTRNRLEGQEIFELADKDENAKKVIDRFTSDLAWFLTSLRNIFDPQT IIIGGGVINSKDFWWNDVLEKFNEYCHLSEKIQIKPAKFLNDAGVIGAGRIAMERLENEQ >gi|325481212|gb|AEXN01000011.1| GENE 155 137006 - 137701 665 231 aa, chain + ## HITS:1 COG:TM1655 KEGG:ns NR:ns ## COG: TM1655 COG0745 # Protein_GI_number: 15644403 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Thermotoga maritima # 4 231 13 241 247 181 42.0 1e-45 MSNKILICDDEDHIRQFMKINLEYAGFDIVEAGTGEEALKMADEEKPSVFILDIMLPGIS GYEVCDTIRKKYPKVGIIMVSAKSQDIDKILGLERGCDDYIIKPFNPQELILRVRSLLRR VNFTDDEKKEKNNNLIEDGIFKLDLYARNFFKNNKEIDVTPTEFIILKNFILNKGKAMSR MEIMKDTWGDNYSTDTKIVDVNIRRIRAKIEENPAKPEYIETVWGTGYRWR >gi|325481212|gb|AEXN01000011.1| GENE 156 137764 - 139137 1186 457 aa, chain + ## HITS:1 COG:BH1945 KEGG:ns NR:ns ## COG: BH1945 COG0642 # Protein_GI_number: 15614508 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 103 448 114 459 462 151 28.0 3e-36 MVFVTVVVVGFEIFSYKSITNYYESALVGAMLNQAKYNQVLYTNYLSRYDLSEIVIGDKN SFYRDNVSQVQILDNSSNVLFDSQGSSRIGTKVKTSDVINANKGEYSYQKIKNKKTGEEV IALSYPLSDNQKQIGILRLVSSTSKVKENVNNQMIIFLFFGFIILFVASVVSYYAAKKWT EPIKKLTKVGEKLAQGDFKAKANESGKNEISELGQTLNYMSENIVKREDMKNEFISSVSH ELRTPLTSIKGWAITLQSKEIQKNEDMLNQGLTIIENEGERLSLMVEDLLNFSRLSSTSF QYEKENLNIVEIAREVYQQLYPRSLNEKINFNFKTAYDKIIVNCDKNRLKEVFINIIDNA MKFTDKEGHIDVMISKDEQNVNIEIKDDGEGIKEDEISFVSSKFFKGSSSKSQTGLGLSI CEEIVKAHDGKLIIKSKYTEGTSVTVVIPRVRDHEQI >gi|325481212|gb|AEXN01000011.1| GENE 157 139124 - 139552 202 142 aa, chain + ## HITS:1 COG:no KEGG:Apre_0897 NR:ns ## KEGG: Apre_0897 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 136 5 139 501 101 42.0 8e-21 MNKFKKISLFFLLLILTSCSFGRPEDVTELIESPKQENPIIKGTWQVEEIKKTGKNELSG IKLKDKLYIDNNLVALNEDYAFPPKFSSKFVNLKSYLESRSLDFDFSSDKYVKILTANQG QLYNKDFVILSKKKYFLFKMTV >gi|325481212|gb|AEXN01000011.1| GENE 158 139836 - 140594 633 252 aa, chain + ## HITS:1 COG:no KEGG:Apre_0897 NR:ns ## KEGG: Apre_0897 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 8 251 249 497 501 166 38.0 9e-40 MDANNKTYNKIDAYPIKLEKEINKKENKEKYTLENDDINLKINFVNEDYISFDYNLISEK LPITKYAVVKTDDLKSNSFMSINEFTGDKKSNEIFKKVIYDKISSNLSLSKDGNISYDYT NFGLVRNFGLWQMQSSYQLEKNDSLEQKTFPIELAFDKNFSNQNNKDITVDQIKNINGQA RDYFELANGQYVAVQSPDEILFYGIKNGLIDPNPKFSIKLANSTQIIMFEQGLGSYAEKW EKTFNDNNIIIH >gi|325481212|gb|AEXN01000011.1| GENE 159 140650 - 141234 232 194 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162456259|ref|YP_001618626.1| putative ribosomal protein [Sorangium cellulosum 'So ce 56'] # 1 191 6 201 207 94 33 6e-18 MKIVLATSNSDKVREIKEILDNKIEIYTPKDFDINNFEVDENGETLKENAYKKAKALYDL INKPTLADDTGLFVKSLDLQPGVHAHRYASENPTDKENRDKLLDELKNKDDRSAYFETTI CYIDQDGKDYYFDGRIDGEISDKEYGEKEFGYDQIFKVIEKNKTFGQMTDQEKNQYSHRS LALEEFKKFLKKED >gi|325481212|gb|AEXN01000011.1| GENE 160 141236 - 141733 388 165 aa, chain + ## HITS:1 COG:PH1746 KEGG:ns NR:ns ## COG: PH1746 COG0622 # Protein_GI_number: 14591503 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Pyrococcus horikoshii # 1 153 1 156 163 73 33.0 2e-13 MKILVTSDTHGEINSVCEFIENNHLELMIHAGDFTKDAYNISKVTGINYITVKGNNDYSD HTNPYEQIIKVEDKNILLVHGHREDVYFTNKILIQKALDYGCNIVIFGHTHTYSNEYIKD LDLYLLNPGSPSLARDNNFGFILIDTEKNFEIKRIDLDKENLWQD >gi|325481212|gb|AEXN01000011.1| GENE 161 141721 - 142071 358 116 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696234|ref|ZP_03304362.1| ## NR: gi|212696234|ref|ZP_03304362.1| hypothetical protein ANHYDRO_00770 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00770 [Anaerococcus hydrogenalis DSM 7454] # 1 116 1 116 116 149 97.0 9e-35 MAGLISLVVDNISKLIVIPIISLIIIGITYFMDKNNDSKIAKFYPSFIIGIVGLVLAIVA IFSLTSSIGLNLALISVILLSNSLVGIFFAFILNLTNNIKKDYDDNHKKVRKDGKK >gi|325481212|gb|AEXN01000011.1| GENE 162 142058 - 142801 750 247 aa, chain + ## HITS:1 COG:CAC0263 KEGG:ns NR:ns ## COG: CAC0263 COG0560 # Protein_GI_number: 15893555 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Clostridium acetobutylicum # 3 243 2 242 247 199 41.0 4e-51 MEKNKAAFFDIDGTLFRNSLLIEHYFLLTKNNILDKNNWITNVKPLYQKYQDRKGPYEDY LDKASLLYQENLKGIDKDTINFYAKKVIENNKSKIYRVTKNALEYHKEKGYKVFVISGSP DFLVNDFAKIYGADDTIATKYVFDKSNKFTGQIYPMWDSKNKKKSIDYLTNKYNIDLSKS HAYGDTNGDYSMFENVGFAHAINPSFELIDRINKSENLRNKTIVHIERKDVNYSFKLKDL KVNFNKF >gi|325481212|gb|AEXN01000011.1| GENE 163 142998 - 143705 625 235 aa, chain + ## HITS:1 COG:no KEGG:Apre_0902 NR:ns ## KEGG: Apre_0902 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 235 6 237 237 172 45.0 7e-42 MTSSAEKKPIIEKLEYDYLINDDISSLNTLMSLYDNKNFSNFSKNKYFIKTYIFKNLKKN FWYLSDIDQIIRSLDRSIGKDLDKFEFLLSIKSENKSFMDKKLIDDLEFCAINYYGDSFL FEENQIFTEDNKYVSDTKNKYVRKIYEDKKLIASIRKDVKKYSDTYLKYKVLNLDVNTNK QLAFDMDMIYTEDITINQAMEINDKLVSLLYNIAIDVYANYYWKGLCIEVINRYH >gi|325481212|gb|AEXN01000011.1| GENE 164 143746 - 144240 619 164 aa, chain + ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 161 1 161 190 169 50.0 2e-42 MIVLGIDPGIAIMGYGVLEVNGNRYNVLENGVVTTSAKTKTPERLEILYKNLSDIIRQYK PDEFAIEELFFNQNVKTAITVGHARGIQVLCAQMNNLPIYEYTPLQIKQAITGFGRANKK QMQETITTLLNLSEIPKPDDAADALAVALTHAFSQRFKEQFRMN >gi|325481212|gb|AEXN01000011.1| GENE 165 144240 - 144833 553 197 aa, chain + ## HITS:1 COG:PA0966 KEGG:ns NR:ns ## COG: PA0966 COG0632 # Protein_GI_number: 15596163 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Pseudomonas aeruginosa # 1 197 1 201 201 105 33.0 6e-23 MISYIIGEIKYIGEENFIIENNNMGYLINSSFNTIKTLEINNEFKIFTKMNVREDDISLF GFSSKDELEVFELLTSVSTIGPKNAIAVLSTLNVDKIKLAIVNNDIDTLTKAKGIGKKTA SRIILELVDKVKKMAINDDISISEDSFTTSNKEIDVAREALINLGYQRNSIDKVLTTLKD SDLSLEEIIKEALKKMI >gi|325481212|gb|AEXN01000011.1| GENE 166 144843 - 144968 247 41 aa, chain + ## HITS:1 COG:no KEGG:Apre_0905 NR:ns ## KEGG: Apre_0905 # Name: not_defined # Def: Holliday junction DNA helicase RuvB # Organism: A.prevotii # Pathway: Homologous recombination [PATH:apr03440] # 1 40 1 40 335 66 75.0 3e-10 MYDQNERIVGSNEQINDKYKELSIRPKWLNDYIGQDKAKEN >gi|325481212|gb|AEXN01000011.1| GENE 167 145016 - 145855 1137 279 aa, chain + ## HITS:1 COG:BS_ruvBm KEGG:ns NR:ns ## COG: BS_ruvBm COG2255 # Protein_GI_number: 16081161 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Bacillus subtilis # 1 274 58 331 336 358 63.0 6e-99 MLLQGPPGLGKTTLSNIIANELGVNIRITSGPAIERPSDLASILTNLDKGDVLFIDEIHR INRSVEEILYPAMEDFALDIIVGKGPNAQSIRIDLEKFTLVGATTRAGMLSAPLRDRFGV LLSLNLYDTKDLTKIVKRSADILDIPIDEKGAFEIARRSRGTPRIANRLLKRVRDYAIVK KDEIIDYETSCEGLELLEVDPMGLDNMDKKIVLTMHENFDGGPVGVDTIAASTGIENVTI EDVYEPYLLQIGFLTRTPRGRILTKKAYEHYGLKYKDKK >gi|325481212|gb|AEXN01000011.1| GENE 168 145852 - 146874 1056 340 aa, chain + ## HITS:1 COG:CAC2283 KEGG:ns NR:ns ## COG: CAC2283 COG0809 # Protein_GI_number: 15895551 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Clostridium acetobutylicum # 1 340 1 341 341 459 65.0 1e-129 MRTEDFDYNLPEELIAQHPADKRDFSRLMVVDRKTGQREDKHFYDIIDYLNEGDLLVMND TRVIPARLFGHRPDKEEKIEVFLLENIEKDKWEVLVKPGKKMKIGTKCIFSDELSLEVID IKEDGNRVVEFSYEGIFQEILDRLGNMPLPPYIKEKLKDKERYQTVYSKNPGSVAAPTAG LHFTKELLKKIEDKGVKLAFITLNVGLGTFRPVKVDDVKNHKMHSEYYQISKETADLINE TKKNNKRIISTGTTTTRTLESVFKKNGQIKEDSGWTDIFIYPGFKFNVIDCQITNFHLPK STLIMLVSALANKEIILDAYKDAVEKKYRFFSFGDAMFLK >gi|325481212|gb|AEXN01000011.1| GENE 169 146883 - 148007 1232 374 aa, chain + ## HITS:1 COG:SA1465 KEGG:ns NR:ns ## COG: SA1465 COG0343 # Protein_GI_number: 15927219 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Staphylococcus aureus N315 # 2 371 3 370 379 523 65.0 1e-148 MAIKYELIKKDKYSNARCGVIHTDHGDIPTPIFMPVGTKATVKTMSVEELKEIDAKIILG NTYHLYLRPGMDIMKKAGGLHKFMNWNGPILTDSGGFQVFSLSENRDISEKGVVFRSHID GSKHLFTPEKSIEIQNDIHSDIMMSFDECIPYPADYKYVEDSVARTVRWAKRGLDYHKAN SHKDQSLFGIIQGGMYEDLRKRSVEETCAMDFDGYSLGGLSVGEPKEEMIRLLKYTTPLL PEDKPRYNMGVGSPDYLFESFEAGIDMADCVLPTRIARNGTAITSEGRLVVRNAKYKDDF TPLDHDCDCYTCKNYSRAYIRHLVNVNEILGARLLTYHNLYFLLKLCEDIRKSIMEDRFL DFKKEFYKKYGYES >gi|325481212|gb|AEXN01000011.1| GENE 170 147991 - 148266 332 91 aa, chain + ## HITS:1 COG:no KEGG:Apre_0908 NR:ns ## KEGG: Apre_0908 # Name: not_defined # Def: YajC family protein # Organism: A.prevotii # Pathway: Protein export [PATH:apr03060]; Bacterial secretion system [PATH:apr03070] # 5 90 1 86 89 73 50.0 2e-12 MDMNLKLEYIILIILALMFYFYSLKDDLVKKKNKKFVRENLKVGSKIMTESKIIGEVVEF NKADCLIISGNEEKNSYLLLETDSIEKILEI >gi|325481212|gb|AEXN01000011.1| GENE 171 148311 - 149693 1039 460 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 444 6 445 456 404 48 1e-111 MIELLKSFENLLWGLPLIIGIIGTGIYISLKTKAIQFRKLPYALKNTLGKILEKPNKENK GDISPFGALATALAATVGTGNIVGVSLAIILGGPGAIFWMWLAALLGMATKFSEVTLALA FREKKNGQYVGGPMYYIEKGLNNKKLAKTFAIFAGIAVFGIGDSTQANAIANVLHDSFGI NTIISGFILSILAGIVIVGGINSITKVTEKLVPLMSFLYIVGCLWILILNKANILPAFKS IFVGAFNPKSLGGSFAGLSVKAIISAGVARGVFTNEAGLGSSPMAHACASTDHPVRQGLW GISEVFVDTIIICTMTALVILSTNVDITDTNNAASLVARAFATGSSIGNLIVSLGLSLFA FSTILGWAYYGETTLRYLFGEKIIIPYRIFYVIFVFLGANMDLGLVWIVANILNGLMALP NLYALINLSPIVVKLSKDFFKNPKKIRKSPSEYNFLLKND >gi|325481212|gb|AEXN01000011.1| GENE 172 149862 - 151592 2297 576 aa, chain + ## HITS:1 COG:CAC2232 KEGG:ns NR:ns ## COG: CAC2232 COG0608 # Protein_GI_number: 15895500 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Clostridium acetobutylicum # 1 570 1 581 587 457 42.0 1e-128 MTKWYIYNKKNNYLSNLKNENITKLEALILANRDIVEPNVIESFINPSLEKLHDPFLLND MKEAIDLIIETMENGQSIRIFGDYDQDGISSTMTLLDGLLYFYDDISYDIPDRVIDGYGI SDRMIDRAIEAKVSLVISCDNGITAIDQVKKLKENGIRVIITDHHQVIKESNGEWIKQIL PDADCVINPKRLDNTYPFDDLCGAGVSFKLMQALYQRLEGDRDYLYGLLEYVAMGTVCDV VSLTDENRIFVREGLKRINNTEKLAIKALIEENSWNKEVNAYTLGFVIGPCMNATGRLST AKLAIDMLMEEDIDKIHSYAKKLVSLNNERKDLTSIGLEKSMEIIKDKKYYKDDIIIVDV DNIEESICGIIAGRIKEKFNKPTIIMTGSNQEGILKGSGRSIEAYNIYTEIFEIKDILES FGGHPMACGLSIKKDRVDEFRKKLNDKSKLTKDDFEEIINIDAQIPIDKLSLEFAESLNR LEPFGKDNPKARFADKNLEIKAINMIGKNNNTLKMTLNKNGRDLEAIKFNAVKDYNYLSD KFNTNIVGNKIDAVFYPDVNEFRGQKNLQIKLIDIR >gi|325481212|gb|AEXN01000011.1| GENE 173 151601 - 153781 2204 726 aa, chain + ## HITS:1 COG:BH1242 KEGG:ns NR:ns ## COG: BH1242 COG0317 # Protein_GI_number: 15613805 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Bacillus halodurans # 8 724 3 726 728 652 46.0 0 MAKDFQKEFINFKKIILKNNENADIDLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATT ISNMQLDDQTICAGLMHDVLEDTPVSKDQMRDLFGEEITFLVDGVTKLKKLNYKTREEKQ AENIRKMVLAMSNDIRVILIKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGI YTMKWELEDLCFRYQKPEEYYELAQMVHNKRRERENYINEIIDTLDKSLSSSKINYEISG RPKGLFSIYKKMSRNKIEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYI GQPKPNGYRSLHTTVFGADSKPFEVQIRTRQMHYECEYGIAAHWKYKENKSKSTEFDEKL TFIRQIMEWQKEGGKDVDSKEFLDTLKGDFFSKEIYIYSPQGEIYALPVNSCAIDFAYRV HTEVGNKCVGAKVNGKIVPFSHKLNTGDVVEILTSKNSQGPSRDWLNIVQSNQAKNKIKQ FFKRYRKEENIEIGKDSLYRELRKTKEIYKRDIKDDWLIEIANDLGYPTEDEMFASIGFG KTNTDQIIQKLIKKHKDELPKNLENLDINKNHNSNKSFSNEVRVSDLEDQVDVKFAKCCN PVPGDKIVGYITKGNGISVHVRNCPNITNLKTPERLIDVYWQNSSSDMFPVRIQINTKDG TGIIFEITKLISAENVSIEAMNVRSNENHEGIIDLTVSVPNTEKLNELIMKLKTIKMIES IYRVKS >gi|325481212|gb|AEXN01000011.1| GENE 174 153781 - 154230 496 149 aa, chain + ## HITS:1 COG:TM0730 KEGG:ns NR:ns ## COG: TM0730 COG1490 # Protein_GI_number: 15643493 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Thermotoga maritima # 1 149 1 149 149 161 53.0 4e-40 MRAIVQKVKKASVTVSDELISEIGNGLLVFVAVTDSDDEKDIDYIKKKIEKLRIFEDSEG KMNLSVEDVGGELLIVSQFTLYGDARKGNRPSFINSSNAKKANQYYEILIKKLKDDGFNV KTGKFQTHMEVSLINDGPVTIQLDSERLY >gi|325481212|gb|AEXN01000011.1| GENE 175 154230 - 154835 671 201 aa, chain + ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 1 200 1 199 199 152 43.0 4e-37 MNIVKISEGSMMANCYLVFDDNKNGFLIDPVYPGGKIENYIDTNKINIEFILLTHTHFDH VLGLNYFKDKLKVKVYASEDSKNIADDPDYNLSRGYCDLTVKIDQYLKDQEEFSKYKIKA IKTPGHSLDSMSYKVEDHIFSGDTLFNLSIGRSDFPGGNYNILINSITDKLFIYDDQTKV HPGHGESTSIGFEKNNNPFLN >gi|325481212|gb|AEXN01000011.1| GENE 176 154844 - 156601 2070 585 aa, chain + ## HITS:1 COG:CAC2269 KEGG:ns NR:ns ## COG: CAC2269 COG0173 # Protein_GI_number: 15895537 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 3 584 8 590 595 633 54.0 0 MEFKRSHMCGELREENIGEEVVLMGWVAKKRNLGSLVFIDLRDKTGITQIVTREEDSENY KTVKDVASEYVLEVKGEVRERESKNPEIPTGNIEIVAEKINILDKAKTPPIYIKDDDDVS ENLKLKYRYLDMRKQSVQKNLKLRSDIVRCMREYMYDNKFTEVETPFLTKPTPEGARDYL VPSRVNQGKFYALPQSPQLMKQLLMIGSLDRYFQIVKCFRDEDLRANRQPEFTQLDIELS FADQDDVIKVNEGLLKKLFDTFTDYDLQLPIPRMDYSEAMNSYGSDKPDLRYGYKINDIS EIFKGSDFKVFTDNIKEGHSVRAINFTGQASNYSRKQLDKLTDFVKDYGLKGLSFIKFNS DNDINSSIKKFLTDDIINNLKEKLDIKDNDLVLIAADKNKTVLEGLGALRRKVAKDQNLY EKEYAFCWVVNFPMFEYSEEEDRYVSQHHPFTMPNEEDVDLLLTEPEKVRTQAYDIVING DEMGGGSVRINNQELQEKVFKALKLSDEDIKQKFGFFIEALQYGTPPHAGLAYGLDRMVM LFAKTDNIKDIIAFPKTQSATCPLTQAPSIVDEKSLSELSIEVKE >gi|325481212|gb|AEXN01000011.1| GENE 177 156614 - 157027 390 137 aa, chain + ## HITS:1 COG:no KEGG:Apre_0914 NR:ns ## KEGG: Apre_0914 # Name: not_defined # Def: positive regulator of sigma E, RseC/MucC # Organism: A.prevotii # Pathway: not_defined # 1 137 1 138 138 103 39.0 2e-21 MQTISKKGIVVENLNGNVKVMIQKESGCGSCSSCGGCEIKPSYYTAFTNENLNPGDFVYL DSDIKTVNRLSYFTYLFPVFMMITGAVLANTIFKNTIQDNNLLTVLFIFIFLALSILVLR FMDKGYENKEIITLRKA >gi|325481212|gb|AEXN01000011.1| GENE 178 157090 - 158406 1306 438 aa, chain + ## HITS:1 COG:FN0170 KEGG:ns NR:ns ## COG: FN0170 COG1160 # Protein_GI_number: 19703515 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 4 435 3 437 440 431 52.0 1e-120 MKAPIVTLVGRTNVGKSTLFNKLVGKRKAITEDENGVTRDRVYDKVEWTGKEFILADTGG LDISNKEIMNQEIKSQVEKALLESDLILFVVDGREGINPHDFEISSELRKYNKKVIVVAN KIDRETIPDHIYDFYQFGFDDLVTISAEGSKNLGDLLDKVVESIDFSKFDTDLDATRIAI IGKPNAGKSSLVNHLLNEERMIVTDIAGTTRDAIDTYWQYKDNNYVLIDTAGLRRKNKVS DNIEYYANQRTFDAVDSSEICLFLIDATVGVTEQDTKIAGYAHNKRKAIIIAVNKWDKVE KETNTMRNMEREIRNKLSFALYAPIIFISVLKGQRITDLLNLIEIVNSNYHTRIKTGVLN TILQDAIMMTAPPQDKGKRLKIYYISQVQTAPPKFLLHVNDKELMHFSYQRYLENQIRQN YSLQGVPFTFEIRERKEK >gi|325481212|gb|AEXN01000011.1| GENE 179 158403 - 158981 515 192 aa, chain + ## HITS:1 COG:lin1323 KEGG:ns NR:ns ## COG: lin1323 COG0344 # Protein_GI_number: 16800391 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 191 3 195 198 124 41.0 1e-28 MKIILVALFSYLVGSIPFSYLIGKIFFKRDIRMMGSGNPGTTNVFRNFGALAGTFTLFLD MAKGLIAVYTTNFFLGEKYALTSLVFVVIGHIFSIFLKFKGGKGVATSAGALLAYDLRVF LCLAIVFIIVFLLTRTVSKASLSASIIAPFISYYFQGLNLFTIIIIFIASMIIIEHRANI IRIKNHEEKKMF >gi|325481212|gb|AEXN01000011.1| GENE 180 158991 - 159971 1209 326 aa, chain + ## HITS:1 COG:SA1306 KEGG:ns NR:ns ## COG: SA1306 COG0240 # Protein_GI_number: 15927055 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Staphylococcus aureus N315 # 3 325 4 332 332 276 45.0 3e-74 MNISIIGAGSWASAIADFLSKENKILMYTRNIEDVDNINKLHINKKYFPDLKLNKNIKAT NNLEKLLDNDIIINAIPTQAIRDVLGKIKDKLDGKILINLSKGIELETYKRVSEIINDLN PNCTYAILTGPSHAEEVIKKMPTALLCACEDEEVAIKIQNLFSKDYLRVYRSTDVIGSEI GGAIKNVLAFGIGMVTGLGFGDNTKAAIMTRGIYEMNKFAISQGANPKSINGLCGIGDLI VTATSMHSRNNRCGILFGKGYSLEEACKKVKTVIEGIPTTKALYELSLKENIDLPITKEI YKVIYEKADPKKSVEILMSRDKKSEY >gi|325481212|gb|AEXN01000011.1| GENE 181 159984 - 160658 753 224 aa, chain + ## HITS:1 COG:CAC2121 KEGG:ns NR:ns ## COG: CAC2121 COG0325 # Protein_GI_number: 15895390 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Clostridium acetobutylicum # 1 223 1 221 221 192 47.0 3e-49 MSIKDNIDDLKKDMKDYDAMLLAVTKTHGVDKIMEVYNYGLRDFGENKVQELLDKKDELP DDINWHLIGHLQTNKVNKIVGEIRLIHSVDSLKILKKINNRAKKLSIVQDCLLQINISKE ESKSGFYEEDIEDIINQAKELENVKIRGLMTMAPNTEDVSVIRSCFKGLKKIFDNLSNLS YNNIEMEYLSMGMTHDYKIALEEGANIIRVGSKIFGKRMYKNVR >gi|325481212|gb|AEXN01000011.1| GENE 182 160648 - 161226 825 192 aa, chain + ## HITS:1 COG:BH2549 KEGG:ns NR:ns ## COG: BH2549 COG1799 # Protein_GI_number: 15615112 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 81 187 49 146 149 63 30.0 3e-10 MLDKFKEFIGINDDYEDYDEEIEEDEKEIKKSSENTENTYTPSSTYDFSNKTIGSDDNTS SFSNFSNDYSSNNKNRKTRGGDNIVSMNSTSRSFGHNSSNSFRIAIQEPLSYDEDGPKIV DDILDKKVVVLNLEMLEVDKKRQILDFVSGAVYALEGTVEKVSKGIFVICPKGVDIDNYV EDQISNGNYNQL >gi|325481212|gb|AEXN01000011.1| GENE 183 161250 - 162017 707 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484957|ref|ZP_03915273.1| ribosomal protein S4e [Anaerococcus lactolyticus ATCC 51172] # 1 255 1 255 255 276 55 5e-73 MKLKYNIDFVEDKSVKANIKKAISLLEKSFYTHKEVSSFFLNPFEISVLNDIAKVNNIEI VFLSCNDKSERQIFIANPYTDYIEKSSYINVLEFKINNISHPDVLGALLNLGLDRNDIGD IYIGDDKCEFVVLNKDKDFVKFNLTKIKNEKVSLDFKNDNILSISKIEYIVNKGFISSLR LDNLVSEFVNLSRSKAQTLIKRRLVKVNYQIIDNPSKIVEENSLISIRREGRFIFDKVIG KSKKDNYHIEYRKYK >gi|325481212|gb|AEXN01000011.1| GENE 184 162014 - 162481 496 155 aa, chain + ## HITS:1 COG:L0335 KEGG:ns NR:ns ## COG: L0335 COG0597 # Protein_GI_number: 15672979 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Lactococcus lactis # 1 143 4 147 150 92 36.0 3e-19 MIYTILIIIGIILDRISKSYAISHFIENPVYGKLINLIYVENKGAAFGILQNKRIFFIIL TLVVVIYLLYYFIRNMKSNPNLLNLSLSLIVSGALGNFYDRLFHGFVVDFIEFSFFSFPV FNVADILVTVGSVLLIIFIIFGKMDGEDHVSSNRK >gi|325481212|gb|AEXN01000011.1| GENE 185 162459 - 163142 775 227 aa, chain + ## HITS:1 COG:lin1190 KEGG:ns NR:ns ## COG: lin1190 COG0692 # Protein_GI_number: 16800259 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Listeria innocua # 3 225 2 224 224 293 60.0 3e-79 MSVQIGNDWDDILKDEWTKDYYINLRKKLIDEYKNYTVYPNMYDIFNALKKVSYDDVKVV ILGQDPYHGQGQAHGFSFSVKKGIKTPPSLQNIYKELHSDLGLYIPNNGNLIKWANQGVL LLNSTLTVRAHQANSHKDLGWSILTDNIIKILNKRSKPIVFILWGKFAQSKEELITNDRH LIIKSAHPSPFAAHRGFFGSRPFSKTNEFLQKNNIKPIDWQIENLDL >gi|325481212|gb|AEXN01000011.1| GENE 186 163137 - 164048 748 303 aa, chain - ## HITS:1 COG:CAC0978 KEGG:ns NR:ns ## COG: CAC0978 COG3359 # Protein_GI_number: 15894265 # Func_class: L Replication, recombination and repair # Function: Predicted exonuclease # Organism: Clostridium acetobutylicum # 15 179 32 202 274 68 30.0 2e-11 MLCVRYPFNGKNLKKDECILDIETTGLDPNTDSLVVLGLIYFNKDKFYIDQYFAKNDKEE IRLLKIYKEKIKSRKLITYNGDVFDLPFLNIRLIKNDQEAVFPENKDIYKIIKSKRKLIE FNSMKLIDIEKRFGIERNDPSRYKVISKLTDEIKNRNNPWPILIHNKNDLISTEAISNIK EVIDDKLSFKVNNYKIHLDSAYINKDIANIEFKSNLNLDDSFFQGYNYNFRIKNKSIILK LIVLYGKLSKDASGFVAVNKFNVENKGYYKINNNLISIMENGIFSVENILNIMKFLIKKN LDL >gi|325481212|gb|AEXN01000011.1| GENE 187 164122 - 164592 509 156 aa, chain + ## HITS:1 COG:CAC2972 KEGG:ns NR:ns ## COG: CAC2972 COG1104 # Protein_GI_number: 15896225 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Clostridium acetobutylicum # 1 153 2 156 379 119 43.0 2e-27 MIYLDNAATTRMYDEVIDIEKDFEKKYFANPSALHSFGMEVENKVKEAREIVASNINSNS NEIYFTKGATESNNIIINSFAGVNNKALTTKLEHSSVIDAFENSNFKKIGFINNDEFGFL DLKDLEEKIDKETKLVSIIYVQNEISTIQNIKKYLK >gi|325481212|gb|AEXN01000011.1| GENE 188 164688 - 165239 342 183 aa, chain + ## HITS:1 COG:CAC2972 KEGG:ns NR:ns ## COG: CAC2972 COG1104 # Protein_GI_number: 15896225 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Clostridium acetobutylicum # 1 182 193 377 379 109 40.0 2e-24 MSFSSHKIHGPKGIGGLYINNSFKNKIKPLLYGGRQEIFSSGTLNAPAIYSFAKALELSK EKEDYSYIKNLNLYLRNKISDKFKGYKINSPLENSSPYILNVSFEKIKSEVLLHMLESDN IFVSSGSACSKGNNSRILSALNMDEKYIDGAIRFSFSHDIKIEDLDFLVDSLYEYVEEIR KVF >gi|325481212|gb|AEXN01000011.1| GENE 189 165239 - 166405 999 388 aa, chain + ## HITS:1 COG:CAC2971 KEGG:ns NR:ns ## COG: CAC2971 COG0301 # Protein_GI_number: 15896224 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Clostridium acetobutylicum # 1 388 1 381 384 311 42.0 1e-84 MQDLLSVSFGELFLKGKNRNKFFKAAIDNIKRNIEKIGYEDMYLESSKLYIKADKNDFKD LIKEIKKVFGIIYISEIKRCDKDINSIENALKEILDNMDIKNKSFKVITNRVDKSFNIKS PDLSQMMGAYILKNYAQKNNLKVDVHNPDFKVFIDIKKYAYVYANRHEGIGGLPLGSSGN GLLLLSGGIDSPVAGFMMAKRGMRINCLHFHSYPFTSKRALQKAIDLGKILSQYTGKMRI YSVNMAEIYKSINKNCHRNQTTILSRRFMMRIAEKISEKNNYHALITGESLGQVASQTVE SMTVIEDATKLPIFKPLIALDKTEIIDRALFIGSYEKSIEPFDDCCSIFAPSNPITKPKL KYIKESESKLDIEELENKAIENMEIFNI >gi|325481212|gb|AEXN01000011.1| GENE 190 166505 - 166816 386 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484963|ref|ZP_03915279.1| ribosomal protein L21 [Anaerococcus lactolyticus ATCC 51172] # 1 102 1 102 103 153 75 9e-36 MYAIIKTGGKQYKVSEGDLVRVEKLNAEVGESVSFEDVLLVKSDSDLKVGTPTVENAKVE ATVKDQAKDKKIVVFKYRPKKASKTKKGHRQPYTLVEINNISC >gi|325481212|gb|AEXN01000011.1| GENE 191 166842 - 167126 253 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228002494|ref|ZP_04049488.1| predicted ribosomal protein [Anaerococcus prevotii DSM 20548] # 1 93 9 102 103 102 51 2e-20 KESRLGFAINGHANFDRHGYDIVCAAVSILSYTAVNTLDYYDIDFDFSDDGETMKVILDK SDNKSEIILCDFEIGVKTLLTNYSEYVNLNYREV >gi|325481212|gb|AEXN01000011.1| GENE 192 167128 - 167421 433 97 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227499558|ref|ZP_03929665.1| ribosomal protein L27 [Anaerococcus tetradius ATCC 35098] # 1 97 1 97 97 171 87 3e-41 MFLNINLQRFSSKKGVSSSKNGRDSNAKRLGVKRADGQTVNAGTIIVRQRGTKIHPGENV KRGGDDTLFASCNGVVKFERKGKNRKQVSVYPKQDIA >gi|325481212|gb|AEXN01000011.1| GENE 193 167472 - 168755 1800 427 aa, chain + ## HITS:1 COG:CAC1260 KEGG:ns NR:ns ## COG: CAC1260 COG0536 # Protein_GI_number: 15894542 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 2 425 3 422 424 365 48.0 1e-100 MIDNAKIELQAGKGGDGAVAFRREKYEPTGGPAGGDGGDGASIYIKATNSLSTLEEFRYK TKYRASNGEDGMGKKRFGKKGEDLYLFVPVGTIIRESTSGKIIKDFKKNGEEFLIAKGGR GGKGNVHYKSSTRQAPRFAQKGKEGQKITVNLELKILADVGLVGLPNVGKSTLISVISKA KPKIANYHFTTLDPNLGVVKIDKERSFIVADIPGLIEGANEGLGLGHDFLKHVQRCKILV HLVDISGFEGRDPIEDFELINNELKLFDENLANKYQIIALNKSDLDSNENYKRFEDKFSD KYKIFRISAATTSGIKELIDEVSNVLYSFDDEKYILDEEVDEEYLEEFYDMSVASDELNF EIEEGIYVCSGYRIDKLLEKVNLDDYDSRMYFERNLRDMGVFDKFKEMGIQEGDLVAIGD IVFDYYE >gi|325481212|gb|AEXN01000011.1| GENE 194 168764 - 169051 208 95 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 [Streptococcus pyogenes M1 GAS] # 1 94 1 96 102 84 42 4e-15 MITGKERSYLKSLAHDLKPIINIGKNSLTDEVIEAIDEALEKRELIKIKILNNNLDDNNE IIDEAIEKLNCEFVSHLGNIFTIYRESKNNKKINL >gi|325481212|gb|AEXN01000011.1| GENE 195 169051 - 169644 466 197 aa, chain + ## HITS:1 COG:CAC1262 KEGG:ns NR:ns ## COG: CAC1262 COG1057 # Protein_GI_number: 15894544 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Clostridium acetobutylicum # 2 197 3 200 200 134 40.0 1e-31 MKIGLFGGTFDPIHIGHLIIMENVINAMNLDKIYILPNSNPPHKLQNKKTDIKIRLKMVR EAIKDNHKIEINDYDYRNNSIHYTYQTIDFFKKTYPDDEFYFIIGEDSFLDIKKWKNYEQ ILKENLIVFKRYSEINSSLLSEINEIKKYNKNIYLIDNMALDISSTLIRSLVKDKKSIKY LVNDKVIEIINRENLYV >gi|325481212|gb|AEXN01000011.1| GENE 196 169637 - 170197 693 186 aa, chain + ## HITS:1 COG:CAC1263 KEGG:ns NR:ns ## COG: CAC1263 COG1713 # Protein_GI_number: 15894545 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Clostridium acetobutylicum # 1 184 1 188 189 135 44.0 4e-32 MFDFSKYKDKLKNDIGEKRFNHVIRVKDMALKLNNGIDEKKVETAALLHDCAKYNEEYFL EKYEDDCDFSNEIITNKAVLHSFLGPIVAKYEYGIEDIEILNAIKYHTTGRENMTDLEKI IFLADACEEKRDYKGVEKLRKLAFENLDDAVLFSLDETIKSLIDRKNIIFPLTIKARNYL LRKKNG >gi|325481212|gb|AEXN01000011.1| GENE 197 170190 - 170501 412 103 aa, chain + ## HITS:1 COG:AGc5039 KEGG:ns NR:ns ## COG: AGc5039 COG0799 # Protein_GI_number: 15890026 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 103 55 154 163 95 41.0 2e-20 MGKLDIIVKTLEDKQAYDVKVIDLENKSSVADYFVLATGNSINQNKALLEYIEENLKKEG FDVLSVEGLREGNWILMDCGDIIVHIFTSNQREFYNIEDLWES >gi|325481212|gb|AEXN01000011.1| GENE 198 170525 - 171151 833 208 aa, chain + ## HITS:1 COG:BH1333 KEGG:ns NR:ns ## COG: BH1333 COG1555 # Protein_GI_number: 15613896 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus halodurans # 9 201 18 203 210 99 31.0 3e-21 MDADKKDKLIIALIIGIVIILSRNFVNNQKKDELVFENTSSSVSIEANQLSNKETREKIE NNNTTMKVHISGEINKPGVYDIKENYRLEDLVNDAGGLTNNADINRINLAMKLEDQMHII IPNKNNQENNQTQDQLVTPTNTNENKKININNADKNSLMTLPNIGEKRAEAIIEYRQKNK FNKIDDIKNVSGIGDKYFEAMKDMIVVD >gi|325481212|gb|AEXN01000011.1| GENE 199 171161 - 171322 217 53 aa, chain + ## HITS:1 COG:no KEGG:Apre_0935 NR:ns ## KEGG: Apre_0935 # Name: not_defined # Def: transcriptional regulator, BadM/Rrf2 family # Organism: A.prevotii # Pathway: not_defined # 1 50 1 50 133 75 76.0 4e-13 MKLSTRGRYGLRAIHYLAENEDNGYISVSDISNTLKLPENYLEQLIRILKKII >gi|325481212|gb|AEXN01000011.1| GENE 200 171418 - 171564 135 48 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696195|ref|ZP_03304323.1| ## NR: gi|212696195|ref|ZP_03304323.1| hypothetical protein ANHYDRO_00731 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00731 [Anaerococcus hydrogenalis DSM 7454] # 1 48 87 134 134 87 100.0 5e-16 MTSSQCVADRNNCNNEECEAYYVFAKIDDAINNAVNSITIKDMVNEKL >gi|325481212|gb|AEXN01000011.1| GENE 201 171578 - 174190 3327 870 aa, chain + ## HITS:1 COG:CAC1678 KEGG:ns NR:ns ## COG: CAC1678 COG0013 # Protein_GI_number: 15894955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 866 1 872 881 727 47.0 0 MRKLGMNELRKEYLNFFGSKKNHTVLKSFSLIPEDDDSLLLINAGMAPLKKYFTGEKKMK NNRATSSQRCIRTGDIERVGITERHGTFFEMLGNFSFGDYFKREAIHWAFEFLTENLEID KDLLWVSVYEKDDEAYKIWNEEIGLSKDRILRFGKEDNFWELEVGPCGPDSEIFVDRGVE KAIDENDNKPGNDDSDRFMEVWNLVFTQFNKNINKEYTPLLHPNIDTGMGLERMAMVLQN KDNIFEIDVNQNIIREIEELSNKKYKENKKDDISIRVIADHAKAMTFMVSDGIQPSNEKR GYVLRRLIRRAFRHGKLLGIEGEFLSSVIEYVIDSYKDEYDELVDRKDKIISVIKKEEAN FQNTIDSGLDILNEYIKDLRENNKDTLDGEDAFKLYDTYGFPLDLTKEILTENNLKVDTK EFDKQMENQRNLARNARKSDAGWSLDSINIDEFDKTEFVGYDDLEVKANIIGLFDDKEKV SFIKEGNKGIVISDKTSFYAEGGGQVADTGLIITGSAKAKVYNVQKKNEIIIHYVEVIDG DLNLAKADFIVDKERRLDITRNHTATHLLDQALRNILNEDVKQAGSLVDEEKLRFDFTYP NALSDDEIEKIENEINEKIRQQLKVKKEIMPYKESEKLGAIGLFEDKYKDMVRVVSIDDY SIELCGGCHVNNSSEVLMFKILQESSAASGIRRIEAITGRKVYEYLNSNLGLINVVSKAL KTNPKNILLKAESLNEEIKNLKSDIQKLKEFNEKDVYKDIENEVQDANGIKLLVHKFENE DLDTLRNFEERIKEKYKDLIVVFATVNNDKIVFTASVSDSLTNRYNAGKIVKEVSKITGG NGGGKKNFAQAGGKDISKLDEALKKVYELI >gi|325481212|gb|AEXN01000011.1| GENE 202 174200 - 174457 345 85 aa, chain + ## HITS:1 COG:BH1268 KEGG:ns NR:ns ## COG: BH1268 COG4472 # Protein_GI_number: 15613831 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 5 85 3 84 90 85 51.0 2e-17 MSDKNFNETMRFNPQDEKEVDIREVLTKVYKALEDKGYKPTNQIIGYLISGDPTYITGHN NARKLIRQIDRDTILEEILNYYINE >gi|325481212|gb|AEXN01000011.1| GENE 203 174450 - 174566 133 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256545147|ref|ZP_05472513.1| ## NR: gi|256545147|ref|ZP_05472513.1| Holliday junction resolvase [Anaerococcus vaginalis ATCC 51170] Holliday junction resolvase [Anaerococcus vaginalis ATCC 51170] # 1 36 1 36 139 68 97.0 2e-10 MSRIMGLDLGDKTIGVALSDPFFITAQAYLTIKRKKLV >gi|325481212|gb|AEXN01000011.1| GENE 204 174638 - 174868 153 76 aa, chain + ## HITS:1 COG:CAC1680 KEGG:ns NR:ns ## COG: CAC1680 COG0816 # Protein_GI_number: 15894957 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Clostridium acetobutylicum # 1 71 63 133 135 67 42.0 6e-12 MNNTLGPQAMKVISFVDLLKKETDIDIKYQDERMTTIQSNKILMDMSVKRENRKKYIDKI AASFILQTYLDGRSNG >gi|325481212|gb|AEXN01000011.1| GENE 205 174849 - 175103 382 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696191|ref|ZP_03304319.1| ## NR: gi|212696191|ref|ZP_03304319.1| hypothetical protein ANHYDRO_00727 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00727 [Anaerococcus hydrogenalis DSM 7454] # 1 84 1 84 84 103 95.0 6e-21 MGEVMDKIILTDDNNKEVEFNIIDTFGVDDKDYAALEPIDEDFILILEMIKDKDSISFKA ISNDREFDEIAKIYEDMKEDKNEH >gi|325481212|gb|AEXN01000011.1| GENE 206 175093 - 175551 463 152 aa, chain + ## HITS:1 COG:CAC1682 KEGG:ns NR:ns ## COG: CAC1682 COG0735 # Protein_GI_number: 15894959 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 1 144 7 151 151 110 38.0 7e-25 MNIEQLKKVFEKNGHKFTKQRQIIFNALKNSNSKHLTPEELFSIVHKDNKQVGIATVYRT LNIFEDLGIVNKQEFTDSVNTYELIGPKDDHHDHLICTNCGKIVEEKILDNDELAKTLKD KYNFELDYYSLRIYGICSECEDNLRSKNENAK >gi|325481212|gb|AEXN01000011.1| GENE 207 175535 - 177211 2090 558 aa, chain + ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 2 553 3 555 555 617 53.0 1e-176 MRTQNKLKVIPLGGLGEIGKNCTVVEYKNEMIMIDCGLTFPDEDMLGVDIVIPDFTYIEE NKDKLKGIFITHGHEDHIGAIAYLLKLIDTNVYCSKLTKGLLENKFKEHGLNPNRLKMVN VNNTVKVGDLSAEFIRVSHSIPDSCAIAVKSPIGTILFTGDFKMDFTPIDGEPTDIQKLA ALGKKGLLCLFSDSTNVEIEGSSMSEKKVGETFINLFGQAPGRIVVATFASNLHRVQQVI YAAEKYNKKVALSGRSMLNNVKIASSLGYIKIRSNTIIDIKNLKDYSDDQIVILSTGTQG EPLSALTRMANNEHKQVHLNSSDTVILSSSAIPGNEMSINNTINNLTKIGCNIIYNSLAK VHASGHACQEEIKLMHQLTTPKYFIPAHGEPRQLKKHKEIAMDMGMNEDNVLVGQNGDIF EFTKRGARINGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSLTIEKHTQKVLS NPEIVSRGFIYVKENQDLIENSKDIVIRTMKKCQKKDIHAISQIKYQIRESLKSYIYNQT GRDPMILPVLTEVENNEY >gi|325481212|gb|AEXN01000011.1| GENE 208 177201 - 177836 535 211 aa, chain + ## HITS:1 COG:CAC1686 KEGG:ns NR:ns ## COG: CAC1686 COG4122 # Protein_GI_number: 15894963 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 3 207 4 212 216 167 40.0 1e-41 MNINHNHIIDYLNSIYIDEDFVELRNFGIENNIPIMKLETKEFLKNLLTIQKPKNILEIG SAIGYSSLLFSKYTGANITTIEKSEKMCEIAKSNFKKYGKDINIINMDAKKALNNINQGF DFVFIDANKSQYKYYFDKSISLLNKNGIIVCDNILFRGEIANDNIVDKRDITIVKNLRKF LSYITDLDEYITSIIPIGDGISLSTRRIDER >gi|325481212|gb|AEXN01000011.1| GENE 209 177826 - 179055 1388 409 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 3 403 2 401 406 422 51.0 1e-118 MRDKVELLAPAGDMERLKTAIKFGADAVYMAGNNFGLRKNSKNFDENELKEAVDYAHKNN VRCHVTMNIVPHDKDLEGIIDYIKYLEKIGVDALIISDPGIFNIAKESSNIDLHISTQAS VTNSHTINFWYKLGAKRVILARELSLEEIIEIRKNVPKDLEIECFIHGAMCISYSGRCLL SNYMTGRDANRGDCAHACRWKYSIQEEKRPGEYYPIGEDENGTFIMNSKDLCLIDEIDKL IEAGINSFKIEGRMKTVFYVATVIRSYRQAIDAYYNDSFDEKVAKKYLDEIKKASHRHFT KGFFYKKADSDSQIYENSSYIRGYDFIAVVLDYDKENKIAKLEERNKFILGDEVEIFGNS PEFIKFKIDNMKDSNGSDIEVANKAKQIVYIKIDHELEKGDIIRRKIEE >gi|325481212|gb|AEXN01000011.1| GENE 210 179099 - 179335 497 78 aa, chain - ## HITS:1 COG:no KEGG:Apre_0944 NR:ns ## KEGG: Apre_0944 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 77 1 77 77 66 75.0 4e-10 MSDEKNITNENQYRGDKELDKKTREANKNEGGESLDKKDHADQENLRSISDEADENSNVG AEARRTRTDISENPSKDN >gi|325481212|gb|AEXN01000011.1| GENE 211 179507 - 179941 534 144 aa, chain + ## HITS:1 COG:RP399 KEGG:ns NR:ns ## COG: RP399 COG0756 # Protein_GI_number: 15604264 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Rickettsia prowazekii # 13 143 17 147 148 127 51.0 6e-30 MTKKILKIKTNNNLPEYKTKYSAGMDIYSSNKNDIIIKPGEIAKIETGLHIEIPEGFFAA IYPRSSTGVKRQLMLANSTGIIDSDYRGEIKLFFYNFGNDCQTIKNGERLAQMVIQPYEK VQIERVDELCESERGEGGIGSTGK >gi|325481212|gb|AEXN01000011.1| GENE 212 179941 - 180486 446 181 aa, chain + ## HITS:1 COG:no KEGG:Apre_0947 NR:ns ## KEGG: Apre_0947 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 11 181 6 177 177 99 40.0 7e-20 MRRRKNNNTFLKLYRKNKYNLILLVFVIVIGLFLFSKALDFLSNRNLTSYDNEIIVVKNN DNEIDSLSLKELRKLGATESKVTLENGEEFTLTGVAIEKILKKEKINPNLNNVVEFSDQK GNKTSLSMETALEVNRVILVYKIDSKPNIEYNKKLGVLFALDKQDKDSGKWIRNIQTINI K >gi|325481212|gb|AEXN01000011.1| GENE 213 180936 - 183545 2659 869 aa, chain + ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 10 869 3 869 869 652 43.0 0 MDQEFKYEKLTPMLRHYVDVKNDFKDSLLLYRVGDFYEAFFTDAITISKTLQLALTGKEC GHDKRAPMCGVPHHVIDTYINKLVKNGYKVALCDQVEDPKKAKGLVKRAITRVISPGTVV DLESLDKKDNNFLLSIFENNFGIGACFADISTGKLMTFEIKSDKNSSANKLINEIEKISP SEIIINSNFSNKKVLEYLDLNKEILINKIDETNNYKSLSENVFKHLGDKNFEKVKNLRIS LIAISNLLDYIYRYHKNNLAHLNEIEILEISSYMQLDANTRRNLELHTNIDKKGKENSLF KLIDKADTVMGSRLLNEWLERPLIDKEKIEKRLDLVEYFYLNTDISHKITFYLDDIYDLE RIIGKISYQRANARDFISLKTSLRNIPEFKKYLSKLDNKDIVSFSKNIPDVSNIYEILDK SIINDPPIVITEGGIIKEGFNDDLDKLKESSISAEKDLINYEKDEKEKTGISKLKINYNK NNGYSIEVTKANTHLVPDYYIRKQTLKNQERYTTEKLEELSNLILGSSDKINELEYKIFG EIREFILDNTKKLQYLSKLISIIDSLNSLAKLAIENNYKKPIITNDNTIKIKDGRHPVIE KNLKENEFIANDTDIGEDNNLIQIITGPNMAGKSTYMRQMAIIIILAQMGSFVPCQSASI SVCDKVFTRIGASDNISKGESTFMLEMNEVSNILKNSTENSFIILDEVGRGTSSDDGLSI AMSLVDYLSKKKRAKTVFATHFHELTILENKLYNVVNLKIDILEEDNNLVFLRKISKGKT DRSYGIEVAKLSGLPDELIENAKIFMDKLDEDDRIFKNSTNIVNNTIDDIYKIKVDKIKE KIDSININELTPLEAINVLSKLIENIKEI >gi|325481212|gb|AEXN01000011.1| GENE 214 183545 - 185347 1645 600 aa, chain + ## HITS:1 COG:CAC1836 KEGG:ns NR:ns ## COG: CAC1836 COG0323 # Protein_GI_number: 15895111 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Clostridium acetobutylicum # 1 600 1 620 622 285 31.0 1e-76 MKIIELDEKTIEQIAAGEVIESPVSIIKELVENSIDADAKNIIVEIKNGGKSYIRVTDDG IGIEEDDFKRAFKRHATSKIKDFSDLYRIFSLGFRGEALSSIISCADVKAVSKTSNQEIG KKLEFKNGKMESKSSIATNNGTSIEVFNLFSNLPVRRKFLGSDINESNKISKIIQALALG YENVSFKFIKDNRLIFQTLENDSLKDKIINLIDENLKDNILKIKAKNSLYNISGYISNTN YYRGNRSFQYIFVNNRLIENNNISKAVESKYKSSIPNQRYPAFFLFIKTNTNNIDVNIHP NKKEIKFTYEDNLIELLEDNVSKVLYENSDFKKVKMPEDQKEELNFYDDYAEVLNLYNKV NEEKTSYEKENIDDKSISDAHDDFFEVEELNFIEKEEKKKASKELEDKRNKNFIDTKNLL YKTSIFNRYSLFINLDKILLLDHRRADQRIKFDEFIENFKKNQINSQQLLEAKIIKVSLE EYNKYIEKKDVFKKLGFEIDTFSFDKLIIRSVPLVFDNPENFEFFYNLLDIDDSNENLFK EKISSLINKNTFRKGDKIDESEAYATIDKLNKSDNPYKTYDGKPTIITIEENELEKYFDR >gi|325481212|gb|AEXN01000011.1| GENE 215 185337 - 186290 852 317 aa, chain + ## HITS:1 COG:BH2366 KEGG:ns NR:ns ## COG: BH2366 COG0324 # Protein_GI_number: 15614929 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Bacillus halodurans # 1 282 1 279 314 228 41.0 8e-60 MTDKVLIITGPTASGKSDIAINLAKEFDGEIISADSQQIYKEMDIGTNKIKSDEMGGIKH YGLDLKYPNQDYSVSEFKDLARNLIKDINSRDKLPIIAGGTGFYIDSIIFDMNYGTHKKD ENLRKKLENEAEIHGNDYIYEKLLKIDPVAAEKYHPNEVQRIIRAIETYKLSGKKPSQIR KGAKELNKEINPLLFFINYDDRAILYEKINKRVDLMFDQGLEKEFRDVVKKYSLSKNSKS LQAIGYKEFFPYIEGEYSKEILLDKIKKNTRRYAKRQITWMKKYLAYDFSYPIYRDKFSD EENLSYIKTLTKETYDL >gi|325481212|gb|AEXN01000011.1| GENE 216 186280 - 187575 1194 431 aa, chain + ## HITS:1 COG:lin1335 KEGG:ns NR:ns ## COG: lin1335 COG4100 # Protein_GI_number: 16800403 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Listeria innocua # 11 414 5 405 408 378 46.0 1e-104 MIYNKLYNIDENIEKYVEKIDISLENRFKKLDKISEYNQIKVLKAFNENNLSSIHFNSAT GYGYADIGRDVVESIFSSIFKSEDSLVRPNIVSGTHAISLVLFSLLNYGDKILSINGDPY DTLQQVIGIEGNKKGNLISKGIKYDKIDLKNDQEIQYDKIKDKLKNDTKLVMIQRSTGYT NRRAFSIEEIERAIKAIREVNEDVIIFVDNCYGEFTETKEPIEIGADIIAGSLIKNLGGG IALTGGYISGKKDLVEYCSNTLTAPGIGKDEGLSFGTTRGVLQGLYYSSKTTIESIKVAL LFAKAFDNLGFEIIPTMDDPRSDIVQAIKLKSSERLELFAKAIQESCSVDCNLTPIADDM PGYEDKVIMSSGGFVEGATSELSCDGPLRKPYTVYLQGGLNKFHGKLALMKVLEKYIDNK VLDQKSLKINS >gi|325481212|gb|AEXN01000011.1| GENE 217 187598 - 187816 105 72 aa, chain - ## HITS:1 COG:CAC1170 KEGG:ns NR:ns ## COG: CAC1170 COG0582 # Protein_GI_number: 15894453 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Clostridium acetobutylicum # 14 70 242 298 299 63 56.0 7e-11 MKKAGFDTRVYSTHKLRHTAATLMYKYGNVDIRALKDVLGHESVSTTQIYTHLDNEDLKR AVNKNPLSNLKI >gi|325481212|gb|AEXN01000011.1| GENE 218 187813 - 188589 700 258 aa, chain - ## HITS:1 COG:CAP0080 KEGG:ns NR:ns ## COG: CAP0080 COG0582 # Protein_GI_number: 15004784 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Clostridium acetobutylicum # 6 242 2 228 323 140 38.0 2e-33 MNITTPLILDDYLSYLKSIRALSEKTISEYRYDLINFIYYQILRKVYFNDKENLNKDIED ENININKIFNKSFISDINIQDMYSYISYLDNELNDNASTRSRKISALRSFYKYLHQEIEI IDNNITEKLRNPKIQKRQPVYLTLSETEHLLDTINEEKNEFLRNRDMAIVFTFLTTGMRL SELVSVDLKDIKDDHFTIIGKGNKERTIYLTKNCIDLIDNYIMIRKNYLKDIKIDALFIS TRKKEYLTGLFNLPLINI >gi|325481212|gb|AEXN01000011.1| GENE 219 188980 - 191235 2135 751 aa, chain - ## HITS:1 COG:L82453 KEGG:ns NR:ns ## COG: L82453 COG0791 # Protein_GI_number: 15672466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 614 750 8 137 259 96 43.0 2e-19 MTIKKSKFILSSFIALTTTIATSSISLADDSEYQDKVYEVYEKYSENKEQVNKDNNSKDQ KLEEADESNAKTNEDLNNENTQESVNSNLSVNSNNETEENNLNNENSNLDNKNSEINSNK ISDDIESTNINKVEDDNSNQIENNDENELDLSPEVNAASFRSVSSYQSRSYSPANNYINT YNTKDEFLTMLQSHAELAKQYNIYPEVMMGQAILESGWGQSKLSKQSKNIFGVKVPNNEK GQGKGDLYDTYEYINGKYVKVKAEFRRFNTYEESIRQYLQLLSGPYYSRYGVSSAKDYKE QVQRIKNAGYATAHNYVSSVLNVIDKNVLPKYKQSQTSASTYSRLTKKSYPKNSWVNKGN DRYYTDPNGNFIGDGIYKIGSNKYYFTNGGKLRTNTKIITNIGAYIIKSNGIMSPIINRW IRVNSDDYHTDSQGKLNKGIFVIENKVYSFDSILGKLEKNKIFKENNYIYASDSSGAINK RSNTRTVIGNYEYSTDLNGKIVKSLDLTRKPEVKFLTSYLSNGKAYNKFSNDTVQLARNA WVNVAGKDFRTNSNGSVLYGIHKIGNHYYHLTYNGISKGYKVYVNKHLYSFDNTGKGYLL SSNYTPVRDLDVAIGWMKQAMNFHYEYSMDWQKRNQIGYADCSSAVYRAMKHGGFISKNT PNGNTETLFELGRRGQILKQISENEIRYGDIFVAGVPGKSLGAGGHTGFILNRNRIIHCN YADYGVSITQRKGRMGDTKYPVRYYRLVGAR >gi|325481212|gb|AEXN01000011.1| GENE 220 191297 - 192349 1457 350 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846478|ref|ZP_08169393.1| ## NR: gi|325846478|ref|ZP_08169393.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 350 1 350 350 354 100.0 5e-96 MKQNKNKNITKITSGALVLLLASGCYIGNSNAEGIKTDSPDMEVSDKESKPAKESTIGDA IKKISETTEKKENKSQDEKENSVTPPTDEGSPAQPQDESKIAEESIGNDNSNNKDDVKPN NNRKENNKEISAENSESQTLTSDKKEEETKEAEDTPKTKDENKNKPADDNNVGKESEAKN TNTKEEKTESTIDSDSKQSKLESQTVPGQGDDQNSKKLKSEIAGEINNIKALVNDGTWSE ESVKAAKAKITNLEAFLLKGDLKDKDLAEVKSALNDIQINVLKKKIVKETNVVKNDDKKV VSNEKSNKLSQKTVIKSNTDNVQTGVGSLSSVLLTLGSSSLALFAGKKRK >gi|325481212|gb|AEXN01000011.1| GENE 221 192505 - 194043 1618 512 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 2 512 3 514 514 486 56.0 1e-137 MNLNQIILSVAFIILAFFIGYLCRKKIGESKISSAEDLSARIIDEANRDAESLKKDALIS AKDEISKRKLESEQEINKKNNELATKEGHLLKKEESLDKRSLLLDKKSDEISSDQKKLKQ KEDRIEKLIEEQELKLQDIAGLTTNEAKDILLQSLKNDVVHEQAKIIKEFEEKTKNESKK LASEIIATTIQRYAADEVAESTVTVVSLPSDEMKGRIIGREGRNIRAFEQLSGTDLIIDD TPEAVVISAFEPIRREIAKVALERLILDGRINPSRIEEMLMKAEDEVEQRIIEDGQSAIE ELGIHNLHPQLVRLVGKLKFRTSYGQNVLKHSIEVAKIAGMLAQELGLDEKDAKRGGLLH DIGKAIDHEVEGTHISIGVEAAKKYGENKNVINCIQSHHGDVEANCIAAILVQASDAISA ARPGARRESLENYIKRLENLEEIANSFDGIEKTFAVQAGRELRVMIKPEKISDDQMVVIA REIAQKIENELEYPGQIKVNVIRESKAIEYAK >gi|325481212|gb|AEXN01000011.1| GENE 222 194138 - 195868 226 576 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 345 563 2 228 245 91 26 3e-17 MNNYKKKESYTRLRNYALNEKKSLFIGFIFSFLRTILEIIGPMIIAYLINKVLKNKMTNK DFKIITVLLFLYFIVFVCSGILLNRSRVYFQISANKIASKVQKDVYDKVSTFPISYFDNL PSGKIASRITNDTNKLKTMFQLLFSDIVNSIILIVGLYITLLITDFIAAIMLLILMPIVF IIFKTYLNKTYTYTKDIKIYTADINAKINEYIQNMEIIQVFNRENFIFKKFDKINKKIYN INLNLSKLRSYSGYRAMDIIQFLAIIIVLIYFGVGSITNIYFVTIGSLYMAIDYTTKIFN NINTIIMRFGDVEDALSSANHIFELMDMDSLEKLEMREVDLSQDIKFEDIYFSYTNEDLI KGLSFNVKSGSSIAFVGQTGSGKSTLINLLLNFYSPRKGKISIGDIDINKIDRNDLRKDM AVVLQDAFLFKDTIKENISMGENFTDKEVIDSLKKVGGDKLLQRGIDSQILENGSNLSQG EKQLISFARAYIRNPKILILDEATSNIDTETENIIQRGINELKKDRTTFIVAHRLSTIKN VDKILVLSHGEILESGNHQELMDKNGLYKKNVSKAN >gi|325481212|gb|AEXN01000011.1| GENE 223 195855 - 197378 216 507 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 249 473 117 340 398 87 25 5e-16 MGWSYNVFKASGSIEYLTRNKLMKKFLGQSQEFFENNSTGSLMGKSTNDITQISIMAGYG TLSLIDATVLPLSIILVMIFTIDLRLTLLSILPLPFIALIYFKIGDKIYDKSKKVNQAFD KLNDTVLEDAEGIRIIRVFNIVENRRKLFYENADKLAENNIILAKYQALLAPVERIITSL TFIIAIGFGAILMNLGQISIGQIVSFTYYLNMLVWPMYALGDFINLKQQASASMDRINET LEYKEDIINSSNKKSLDSPVSIEFDKHSFKYPSSKNNILNEISLKIKASTSLGVLGKTSS GKTTLIKQLLDIYRVDKSSINFNDDVSSDISFKSFKEKIGYVPQQHMIFSDTLRNNILFS NENVSEEELLRAIEIADFKKDIEGFELGLETVTGEKGVSLSGGQKQRLSIARAVVNNPEI LILDDAMSAVDANTEKNILNNLIKYRKDKTTIIIAHRISQVQNCDNIIVLDEGEISEMGN HDELMKNGKWYKKQYEDQILGDNNEQL >gi|325481212|gb|AEXN01000011.1| GENE 224 197669 - 198196 515 175 aa, chain - ## HITS:1 COG:CAC0687 KEGG:ns NR:ns ## COG: CAC0687 COG1045 # Protein_GI_number: 15893975 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Clostridium acetobutylicum # 11 170 9 168 186 171 56.0 7e-43 MTYEEYKKELVEAALLKDPALTKAEEAIKFSPGIKALLAHYKAHKLYLEGEFSKANEISL NARKETGIEIHPGAKIGRRCYIDHGMGVVIGETAEVGDDVLMYHGVTLGGVKNERVKRHP TVGNNVLIGAGAILLGNITIGNDCKIGANSVVLADVPDDCTAVGAPAKIIKHKHN >gi|325481212|gb|AEXN01000011.1| GENE 225 198198 - 199109 802 303 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 303 1 307 308 313 52 5e-84 MTINTNSKELIGNTPLLKLNSLKKEGRADIYVKVEKNNLAGSIKDRIALYMIEEAEKSGK LKKGDTIVEPTSGNTGVALAALAAAKGYKCILTMPSSMSIERSKLAEAYGAEVIRTTENA LQGAVDKAVELSKKEGYFMPDQFSNPANVKAHYETTGVEILNEISPDAFIAGVGTGGTVT GVGRRLKENNDNVKIYAIEPAESPLLSGGKASGHKIQGIGGNFIPKNLDFDVVDGIVDVK SDDAIKTSRDLAKNEALAVGISSGANVFGAIEIADKLGEGKAVVTVLPDTGERYLSTQLY DLD >gi|325481212|gb|AEXN01000011.1| GENE 226 199255 - 199923 337 222 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 3 216 4 275 283 134 34 4e-30 MAVTAKLVKELREKTGAGMMDCKKALTETDGDIDQAVKLLKEKGQATLDKKADRIAAEGV IGSYIHNDKIGVIVEINTETDFSANTDAVREFARNIAMHIAALNPLYISEEDADEKDVAE QREILIKQAMNEANDNMPEDKKEMIAHKKVEGRLKKYFKDVCLLDQQYIKNPDLTIEQYL RDTANSVGENIKIRRFARFEVGEGLEKKEEDFAKEVQSQMNA >gi|325481212|gb|AEXN01000011.1| GENE 227 199937 - 200251 246 104 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|194553338|ref|YP_002088365.1| 30S ribosomal protein S2 [Pseudomonas aeruginosa 2192] # 1 96 1 92 93 99 57 2e-19 MEELPDALFVVDPSNEQIAVHEAKILGIPVISIVDTNCDPDVVDIAIPGNDDAIRAVKLI TSVMADAVIEGNQGSEFAVNEDDFEEVEEESVDSVEEQEESIEE >gi|325481212|gb|AEXN01000011.1| GENE 228 200221 - 200709 654 162 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227499526|ref|ZP_03929633.1| ribosomal protein S2 [Anaerococcus tetradius ATCC 35098] # 1 156 1 156 276 256 78 7e-67 MSVVSMKKLLEAGVHFGHQTRRWNPKMSKFIFTERNGIYIIDLAKTSNQIDKAYEVIKDI ASEGGSILFVGTKKQAQDSIEQEAKRCGQYYVSNRWLGGMLTNFNTIRNSVNKLKKYETM EEDGTFDLLPKKEVLQYNKEMDKLKKILVVSKKWKNYQMLYL >gi|325481212|gb|AEXN01000011.1| GENE 229 200847 - 201953 787 368 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 68 366 20 319 336 307 50 3e-82 MFDFFKRKKNENEKQVESELIEEVEDENQLDENEDKNINEVENKTHTEEDQEKEIIGEED KEELGFFEKLSKGLTKTREQFSSKLKNLFTANVKIDDDLYDELEEILISADIGMQSTIEI VDELKDKIKERSIKNADQIFPLLKEIMEDKLDEKNLDNELLISNDKLSVILVIGVNGVGK TTTIGKLAHNLKKEGHKVTLAAADTFRAAAIEQLDSWAKESNTQMIAHKEGSDPSAVIFD AIQAAKANGSDVLICDTAGRLHNKKNLMNELEKINRTISTHANNANRENLLVLDATTGQN AISQLREFKNVCDITGLILTKLDGTAKGGVIFPLQVELEVPVKYIGVGEGIDNLEKFDSK SFVKAMIE >gi|325481212|gb|AEXN01000011.1| GENE 230 201963 - 204341 1775 792 aa, chain - ## HITS:1 COG:BH2509 KEGG:ns NR:ns ## COG: BH2509 COG1198 # Protein_GI_number: 15615072 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus halodurans # 1 781 1 788 804 552 38.0 1e-156 MYCLVILDNKSRFLDQSFTYHVPEKFENKIQKGMRVIVPFGKGNKNTIAFVYDLVENLSK EFKTKDILEIVDSKALVDEELINLAFYMNRRYLSPLRSCVRQILPPGKIDKIKEYYYPSE NLKKDDEFYKVFKNKITKKKILNKYNIDEDLLNQYKKNGLIKTYFDINSNQKINYTYIFN LKKDYDDKKLPSNAKKQKEILDYLKYHKDVEYKELLKNTKSSKNSLDSLIEKNLLEIKKI EIKKPIVGKVKYYKKPVLTAEQNKIIKKIMDQPNKSYLLKGVTGSGKTEVFLQIVEENLK KGKDSIILVPEISLTPQTIERFQGRFNQKIAILHSRLTQKEKFQQWRMIKNGDVKIVVGA RSAIFAPFKNIGAIIIDEEHDKSYISSQDPKFHTDELALFRQKYNKATLIFASATPSIKT MTKALNGQYDLVELKNRVNGKMPKVEIVDMREELKKSNYSMISSPLYDKILEKLKNKEQI ILFLNKIGHNSFTFCRNCGYVVKCEACDVSMTYHKNVSKLVCHYCGRTKNQPKVCPVCGS SKIKEFGAGTEKLEEEVKKLFPHANIIRMDSMTAKDKSSYDNMYKLMKEKKVDILIGTQM IAKGLDFENVTLVGIISADLSLNIDDYTAYETSFELITQVSGRAGRSKKQGQVIIQTYKP DNFVINAASKNDYQSFYNYEIQARKAFEYPPFVNLITIKILDKSRIKCIDISKKIKYYLD LEYKKNDRVKIIGPNPCKISRINNKYRYNIIIKLKDSQLEEISDFLTRLKKYFINKNKET SIIIALNPSDIN >gi|325481212|gb|AEXN01000011.1| GENE 231 204351 - 205523 1340 390 aa, chain - ## HITS:1 COG:BH2510 KEGG:ns NR:ns ## COG: BH2510 COG0452 # Protein_GI_number: 15615073 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Bacillus halodurans # 1 389 1 393 404 315 42.0 1e-85 MIKGKNILLGVSGGIAAYKVLELCSRLKKEGANLKIIMTKGACEFVSPLSFETMGKCIVY SDMFEGHHDRVYHIDLPKWADVFLVAPLSANTLAKMTYGIADNMLSASLLACDKDIIVAP TMNTNMLNNKATQENLKKIKERGVHIINPNSGLLACDTRGDGRMEEPVNIVKYLDYYFTK KDLSGKKIVVSAGPTVEPIDYVRFISNKSSGKMGYNIAIEAFKRGADVKLISGPVNPMDT DGIDKINIRTNKELKEAIEKEFDDCHALIMSAAPTDYKVRNVSDKKIKKDGNNLNLELIE NIDILKYFGNKKDKQVLIGFAAETDDLIKNAKIKLESKKADYIIANDLKKKGAGFDVDTN IASILSKNKVEKLDLMTKKELANKILDLLV >gi|325481212|gb|AEXN01000011.1| GENE 232 205516 - 205704 291 62 aa, chain - ## HITS:1 COG:no KEGG:Apre_0961 NR:ns ## KEGG: Apre_0961 # Name: not_defined # Def: DNA-directed RNA polymerase, omega subunit # Organism: A.prevotii # Pathway: Purine metabolism [PATH:apr00230]; Pyrimidine metabolism [PATH:apr00240]; Metabolic pathways [PATH:apr01100]; RNA polymerase [PATH:apr03020] # 1 60 1 60 62 84 76.0 1e-15 MNNPSFKDLAEISSSRYEICMMAAKRARRIVNGSDLLTKDHEDKPVTQALHEIMEGKVKK ND >gi|325481212|gb|AEXN01000011.1| GENE 233 205707 - 206303 616 198 aa, chain - ## HITS:1 COG:BH2512 KEGG:ns NR:ns ## COG: BH2512 COG0194 # Protein_GI_number: 15615075 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Bacillus halodurans # 2 184 4 186 204 195 55.0 5e-50 MKKGFLLVISGPSGVGKGTVLHDLMNTQKNLVYSVSVTTRKQRPGEIEGVSYFFKSHEEF EKMIEEDKFLEFAKVHDNYYGTPKEFVEEKINEGKIVILEIDVQGALNVKKNIDNGVYIF LAPPSLSELKNRIVNRGTETESDINLRMSNAKKELSYIKNYDYLVVNDHLNSAINLVNEI INAEKHRVFRENINFDKE >gi|325481212|gb|AEXN01000011.1| GENE 234 206403 - 208151 1800 582 aa, chain + ## HITS:1 COG:BS_yloA KEGG:ns NR:ns ## COG: BS_yloA COG1293 # Protein_GI_number: 16078628 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Bacillus subtilis # 1 571 3 562 572 316 35.0 9e-86 MSYDGLVTRAVTFEIKKLLLGAKIQKISQPSKNDIILNIYSFGKTYKLLLSANNNEARVH ITEKKYENPEVPPNFCMVLRKHLSQSKIIGIDQYKLDRVIVFKISSVDEMGFDVSNKLIV EIMGKYSNIILTDDKYKIIDSIKRVNFKMSSVREILPGLEYKFIESDKINILDKDFSKDI LSLDKNLPDSQIPQKIFYENYLGFSPTVAKELLFRSNIDPRINWGLVSEDEKRLLNENLY KLRDDLINNSYNPCLYKDNRKYKEFYSFELKSLAFEETKCKSLSQAIENFYEFNRSNDRL RQIKNNIERKINGQKKSVKKKIQILNKNISKEKSMDSYRKKGDILAANINKIKKGDKEIN LSNFYDDNKNIKISLDDRKNPWENVDSYYKRYKKIKNSIDFAKIDLPKQNEYLDYLNQMS DFVERSESIKDLDEIRDELIENKIIKRTSKNKNNKKTKSKPMQFKTIDNSDIFVGKNSRQ NDYITLKLAGKNDYFFHVRNAPGSHVILKTNELNKNDIKAASYLAAINSSQANSLKVDVD YTEKKNVNKAKGAKLGMVYYENFNTITVDMDEKPDKLYKKIK >gi|325481212|gb|AEXN01000011.1| GENE 235 208207 - 208488 401 93 aa, chain - ## HITS:1 COG:CAC3211 KEGG:ns NR:ns ## COG: CAC3211 COG0776 # Protein_GI_number: 15896458 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Clostridium acetobutylicum # 1 91 1 90 91 85 67.0 2e-17 MNKSELLVNISEKSGLKKVEAERALNAFIETVTESLQKEEKVQLVGFGTFETRDRKAREG RNPRKPDEVIKIPASKAPVFKAGKTLKEAVNNK >gi|325481212|gb|AEXN01000011.1| GENE 236 208577 - 209497 663 306 aa, chain - ## HITS:1 COG:no KEGG:Apre_0965 NR:ns ## KEGG: Apre_0965 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 306 3 308 308 198 45.0 3e-49 MKRIQKVLIQKKTIIAIISLFCLILVSCSSKIDKKNSVAYVDGQAISKNLYEKELSYYQK FYLKKYGNDYLDKKTKNGLTNYERLESELLDSLVQDQIMINDLRKNKVKITKNDSLEVIE DLSKKSMSKDSLIENVKSFGADEDEFDEISYMDSIRKKHMDYYFSNDDTKDSEIVDYFKE NKFLQKKYKYDCLIFDNESEAIKIRAKIKNSQDFKKYLNSKVRNYDIYRSDFVYNDDFLL KESSLKKADQISKIFKYKDSYIILMINSVNQNENDLLIDAKKIYLKNEYDKYLKNLIKNS NIKLFI >gi|325481212|gb|AEXN01000011.1| GENE 237 209442 - 210479 1357 345 aa, chain - ## HITS:1 COG:BH1177 KEGG:ns NR:ns ## COG: BH1177 COG0760 # Protein_GI_number: 15613740 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Bacillus halodurans # 50 305 31 282 333 119 33.0 8e-27 MNKKIIALVLATSFLFSACANDNAKDKNDKGSNETQTSESAKKEDLPKDAVAVVGGEKIS KESYKDEMSFYSAMLASQQQLKPSIVQMLIQDKLIADDMKKNDVKVDDKELNDKFLQYIQ QFGGQEKFDKMLEDYNMSSDKFKETIKKDQIYQKHREWFEKKNPVSDKDIKKYYDEHKDT LAQVKASHILVEDENTAKEVKKKLDDGEDFAKLAKEYSKDTANSAKGGDLGYFTKDKMVK EFADKAFAMKKGEISDPVKTSYGYHIIKVEDKKDNPDALKEEISKALNDKKYADYLTDLF NKANVVTEDGPQKKDAKKDAKTSDLNKDEKNTESSNTKENNNSNN >gi|325481212|gb|AEXN01000011.1| GENE 238 210479 - 213970 3271 1163 aa, chain - ## HITS:1 COG:BH0069 KEGG:ns NR:ns ## COG: BH0069 COG1197 # Protein_GI_number: 15612632 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Bacillus halodurans # 28 1101 29 1104 1181 853 41.0 0 MTNLLKEIYNISQVREIIDNYTKISPVFLHGLTDQSKAHIFSTIFKYTDKTIVIICENEK KAQVMCEDINSIVEDKCMYFPSTEINYYNIKNLEKNNQISRLEVLSRIIGNDNFIITTSL DALRNKLTPKKIFKEKSFKIDIDNEIDIKEIKNSFLELNYDFTKLVESKGEFSIRGSIID FWPIEYENPIRIELFDTEIDSIRFFDKDSQRSLENIDEILVRPTKELIYEKSDYEKSIKL IDKDIDSLSDNLGMSKLKDKYSQIVSYLKDSLYISNDDLISPYRADNFDDFFDYIKKDSI FVFEDLNRSIDNFNDIMDKFNLDLANQMDNGEVFSTFKNIKINIDEIYKHIKSYPIINSA SLLKNNNFIRAKKIIELKSIEQENFNRNISNFVDNIKTVIKNNEKAYIFASDKKSLENIK EIFDENEIVNYSLDFEIEDDKNNVYLSDKSLSRGYIFTNYKINTYTHRDVFGKEKHKNKK RKNKALNARDIINYSDIEIGDYVVHENNGIGIYKGISQIEVNNTKKDYFVIEYQGNDKVF VPVDQMDLVSKYIGNKGDKPKISSLGSNQWKKAKQRAKKAVDEIADDLVELYAKRSKARG HAFAKDTPWQKEFEDSFIYEETDSQLRSIDEIKDDMEDIKPMDRLLCGDVGYGKTEVALR AAFKAVMDGYQVCFLVPTTILARQHFKTMQERFKDFPIDCAMLSRFVSKKDQEKYIHNLK SGKIDIIVGTHRLLSKDIKFKKLGLLIIDEEQRFGVRHKDKLKKLKENIDVLTLSATPIP RTLQMSLTGIRDMSTLDEPPERRQPVNTYVLEYDFSIIKRAIEKELDRDGQVYFVYNRVY NIDKIYNHLKLLVPDAKIEIAHGQMSAKSLEKIMEDFVSGEIDILLATTIIETGMDIQNV NTIIVYDSDMMGLSQLYQLKGRIGRSSRSSYAYFTYAKGKVLTEIGEKRLKSIKDFSDFG SGYKIAMRDLELRGAGNILGESQSGQVEAIGYDLYVKFLQQAIDKASGKDIDSIKFNDVY IDIKIDAFIPESYIEDSSQKIQMYKRISSIEDLEDYSLLVEDLIDRYGDIPVMVDNIMYV SLIKSMADKLGFDQIREVNGEIRISFNDRNKFSFEELSQINEDYKGELAFDLSENPAFKL PNKNTKLIDCYELLKVIKNIKEK >gi|325481212|gb|AEXN01000011.1| GENE 239 213963 - 214547 620 194 aa, chain - ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 1 189 1 187 187 182 48.0 4e-46 MYYIVGLGNPGMQYENTRHNAGFISIDYLARKYDIDVRKIKFKSLIGQGVISGHKVMLVK PQTYMNNSGEAIREIFNYFDFDHDKLIVIYDDIDIDFGSIRIRKKGSAGTHNGMKSIIYN LQFDDFPRIKVAVGKKPEYMDLANFVLSGFSKKEAKIIEEEVMLLSDAIEMILEEGIDKT MSIYNSKRLVEDND >gi|325481212|gb|AEXN01000011.1| GENE 240 214551 - 216926 2462 791 aa, chain - ## HITS:1 COG:BS_prs KEGG:ns NR:ns ## COG: BS_prs COG0462 # Protein_GI_number: 16077119 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Bacillus subtilis # 481 787 12 316 317 367 59.0 1e-101 MLKNIILAAGEGTRMKSNTSKVMTKILNRELITYIVDACSFENSKTIIIGGKNKSLLEEK YPNLEIKEQKIGDDFPYGTAYAVSMAIDLIDENDDCLILNGDIPLITKKSLEDFINFHKE NNNNLTVMSTKIDNPTGYGRIIRKDNKFQKIVEEKDASIDEKKVNEINVGIYAFKGKDLK ESLKKIDTNNNSNEYYLTDCIEILNNEGKKVESFVADNPDQFYGINNKKELANAAKLLRE RINDYHMLNGVIIENPSIVNIEKGVKIGKDTIISGPCKILGDTEIGENCFIEGSSRIEDS IIKDNVKIDNSVIEKSFVGQGTDIGPFSHLRPKAKLGKNVHIGNFVEVKNANVDDGTKAG HLAYIGDCDLGKDINIGCGVIFVNYDGKFKHRSKIEDGAFIGSNSNIVAPVHVKKEGYIA AGSTITKDVDEGVLSIERAEQKNIPGYVEKRKKRFRKIKGAKIKMSESTSSAHINRGEMI LFAGNSNPELAKAVAKSLGLELGKVEVKKFADSEINIKINEAVRGKDVYIIQPTSYPTND NLMELLIMTDACRRASAKYVNVVVPYYGYARQDRKTRGREPISAKLVANLITVSGADRVI TMDLHAGQIQGYFDIPVDHFSAVKLLSSHFKEAYNNPDEYVVVSPDLGGVTRARKFADSL KLTIAIIEKRRPRPNVSEVMNVIGDFEGKHCILVDDMIDTAGTICNAANYLKDHGAKDVS IAATHGVLSGDACKKLENACVKEVVITDTIKIPENKKIGKIKQMSIAPLLAEAIHRINTN ESISGLFDDEI >gi|325481212|gb|AEXN01000011.1| GENE 241 216936 - 217655 944 239 aa, chain - ## HITS:1 COG:SA1940 KEGG:ns NR:ns ## COG: SA1940 COG0813 # Protein_GI_number: 15927712 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Staphylococcus aureus N315 # 1 237 1 235 236 253 55.0 3e-67 MTIPTPHISAKSKDEIANTVLMPGDPLRAKYIAENFLEDVKQFTQTRGMYGYTGYYKGKR VSVMGSGMGIPSSMIYFNELFNFYDVDTIIRIGSAGSMQENIKLHDIVLATSACSESSIN DNLFGNIHFSPTPDFNLLLEAYKKSQDLGYTTHCGQVHSSDQFYNDMDPKVFENLQKYGV LCVEMESYGLFTVARKYGKKALGVFTISDSLVSNESDSAENRQSAYTQMMTLALEVAPE >gi|325481212|gb|AEXN01000011.1| GENE 242 217746 - 219740 2288 664 aa, chain - ## HITS:1 COG:BS_tkt KEGG:ns NR:ns ## COG: BS_tkt COG0021 # Protein_GI_number: 16078852 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Bacillus subtilis # 3 651 2 653 667 744 55.0 0 MFNEIDQKAVNALRCLSIAQIEKANSGHPGLPMGVSPMAYVLWNKVMNVNPKKSDWHNRD RFVLSAGHGSSMLYSLLHLSGYDLSIEDLKNFRQIGSKTPGHPERKHTDGIEVTTGPLGQ GIANAVGFAIAEKHLASLYNKKDFNIVDHYTYAICGDGDLMEGISYEAMSLAGHLNLNKL IILHDSNDICLDGNLNTSFSENMEQRVKAQNWNYIKVSDGNDLDEIYKAIKTAKENKNGP TFIEVKTIIGFGSKNQGTNKVHGAPIGQEDFAEAKKAYNWTDNDFHISDDVYDIFKENII KNGEKAYSDWENLLNEYKEKYPEEYKEYISGFERKLPENWIDQVKKYSPEDDSLATRASG GEIIQDLAKVTKNFWGGSADLFSSNKTNIKDSERFSDKNPEGRNIWYGVREFAMSVIANG IVAHGGTFHHVSTFFVFSDYLKAGLRISALSHIPVTYVLTHDSVAVGEDGPTHQPIEQLA MIRSIPNTIMLRPADANEVRLAWKIALESKDSPVVIALTRQNVKNLEGTKDLDDISKGAY IISDSDKETPDGILIATGSEVELALETKEELKKSNIDVRVVSMPSMELFRNQDNDYKQKV LPKEVENRVSIEMATSFGWSEFTGDKGLNISIDRFGISGNFKDVKEELGFTKEEISKKYI QKFN >gi|325481212|gb|AEXN01000011.1| GENE 243 219740 - 220183 682 147 aa, chain - ## HITS:1 COG:lin2811 KEGG:ns NR:ns ## COG: lin2811 COG0698 # Protein_GI_number: 16801872 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Listeria innocua # 1 146 1 146 146 154 54.0 5e-38 MKYIIGNDHGGIDLVDSVEEKLLELGHEVEKIGTYTKDSCDYPDFAKEACEKVLANQADF AILICGTGIGMSLAANKFKGIRAACVSDVFSAKMSRAHNNCNVLCFGSRVIGSEVAKMIV EVFANTKFEGGRHSNRVEKITEIEEKN >gi|325481212|gb|AEXN01000011.1| GENE 244 220349 - 221740 1570 463 aa, chain + ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 4 457 3 454 458 333 39.0 4e-91 MFEFNINDHKYKNIHMIGIGGISMSGIAILLKNNGYNVTGSDLSISETSRHLDKNGIDYV IGQKKENIKNPDLVIYTDAISDNNEELIAARSLGVPVVTRGVFLGGLMKNYKNSIAVSGS HGKSTTTSMISKILMNSTKNPTILLGGDLDEIEGNVHVGDEEILVTEACEYKGNIRYYYP SIGIILNIDEDHLDYYKDLNDIIETFKSYLKNQDENSKTILNLNEENNKLVIDSVQGELI TYGQENPDADYNATNITFDEDGKPRFDLIMKDGSTEHFELSILGRHNINNACAAIISTLE SGVDIETIKNSIQSYKGLERRMQLLGNIDGCKIILDYGHHPSEIQVNLSALAEHTKGRLI CVWQPHTYTRTKRLFNEFVNCFDDADEVIITDIFAAREPFDPSISSKDIVDALVEKGKSA KYLPTFDQVKEYVLSDIKENDQVIVTGSGDSDHLAKMIAGISE >gi|325481212|gb|AEXN01000011.1| GENE 245 221770 - 222636 572 288 aa, chain - ## HITS:1 COG:CAC0946 KEGG:ns NR:ns ## COG: CAC0946 COG2333 # Protein_GI_number: 15894233 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Clostridium acetobutylicum # 1 288 1 292 320 186 36.0 4e-47 MRAKIKNILIIFLSLIFIFLLINTKEDKGHKNLKELEINYIDVGQGNAVLIQSNDKTLLI DGGNRSNSSYYYNFIKNKNVKKIDYMIASHYDEDHIAGLISILENYEVSNVLCPNYKKDT KIYKSFKKSLKKSNANIIYPKKGDKFNISDAKLQILWPNEYKQGVDNDNSIVVKLRYGNM SFLFPADASTNVEDQLIYSGFNLKSDVLMLGHHGSKYSTSKQFLKEVDPKLAIISVGKNN RYGHPSSRVLKTLNDKNIKILRTDKDGDISIKCDGEKIKITAKKTNKK >gi|325481212|gb|AEXN01000011.1| GENE 246 222636 - 222980 527 114 aa, chain - ## HITS:1 COG:CAC0494 KEGG:ns NR:ns ## COG: CAC0494 COG2337 # Protein_GI_number: 15893785 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Clostridium acetobutylicum # 3 114 5 116 122 150 66.0 6e-37 MKVKRGDLFYADLSPVVGSEQGGVRPVIVVQNDMGNKYSPTIIVVPVTSQLKKSKLPTHV TLSGNKFGLPKNSVALLEQLRTIDKRRLRDKIGSFDKSIMLKIDAAIAISVGIE >gi|325481212|gb|AEXN01000011.1| GENE 247 222970 - 223503 404 177 aa, chain - ## HITS:1 COG:BS_yncD KEGG:ns NR:ns ## COG: BS_yncD COG0787 # Protein_GI_number: 16078827 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Bacillus subtilis # 1 170 205 384 394 136 40.0 2e-32 MHISNTAASMEYNFKSDLLRLGIGIYGIYPSDYIREISKIKLCQAFEFKAQISFIKDVRK GTSISYGRTYIAPKDIKVATVSVGYADGFKRSFSNTGEVLVNGKIAKVVGRVCMDQIMVD VSGIDCKIGDYITLYPDIYKEANKIHTIAYELMTSISNRVPRIYKANNKIIGDINES >gi|325481212|gb|AEXN01000011.1| GENE 248 223646 - 224071 505 141 aa, chain - ## HITS:1 COG:CAC0492 KEGG:ns NR:ns ## COG: CAC0492 COG0787 # Protein_GI_number: 15893783 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Clostridium acetobutylicum # 8 131 12 139 386 81 38.0 4e-16 MQENYLLVDLDKILNNIKLIKEKSINSKICAVLKADGYGLGALEIAKYINDQIDYIAVAQ FKEAKYLRDNGIDKPILILGYLPLDKYKECSSLNIDVGIYDLDYARKINESITGSINCHI LLDTGHTRLGFRDFEIEKIKT >gi|325481212|gb|AEXN01000011.1| GENE 249 224073 - 225260 1203 395 aa, chain - ## HITS:1 COG:CAC0490_2 KEGG:ns NR:ns ## COG: CAC0490_2 COG0063 # Protein_GI_number: 15893781 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Clostridium acetobutylicum # 108 391 26 301 309 175 38.0 2e-43 MIGIDIVNIENFKNKLEKNNFDSKIFTDNEIHYSRKKENSIQTFAGIFAAKEATIKAFNL NLAYILRKKIEIIHINNKPKIYIDGNRLNSFLSISHDGSYAIAVCIKNEEFFKIDKDVKN LIKKRPECGHKGDFGKVAVIGGQKGMTGSVYMSSLASLRSGAGLSYIICPSSISDILQIK STESIIEEVACDYFYNEINIVNKILNLSKDKDAIAIGPGMGKGKDLNQLVKAILDNYHKK IVIDADGLNSLKNDIHIINGKENIVLTPHEMEFSRISRLPLSYIKKNREKVAIDFAKKHK VILVLKGKNTIVTDGNRLYINNSGNSGMATAGSGDVLTGILLSNLCLMDTFEAAVFSVYI HGLAGDIYAKNNCEDSLIASDIIENLPKAYRLMRC >gi|325481212|gb|AEXN01000011.1| GENE 250 225257 - 226375 978 372 aa, chain - ## HITS:1 COG:MA1276 KEGG:ns NR:ns ## COG: MA1276 COG0402 # Protein_GI_number: 20090140 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Methanosarcina acetivorans str.C2A # 1 371 66 439 442 297 41.0 3e-80 MPGFINAHTHVGMSLFRNYSDDVELMDWLNNKIWPLEDKLTEKDVYWASLLSQSEMIMTG TTTFADMYYYEDQTIKALEKSKMRAQISRGLTLEDENYLKIKENIDLYQKYENSQDGRIN IALGPHAVYTTDKNYLKEISKVSKKYNMPIHIHLSETKIENDDCIKRFGQSPTEVFEECG IFENKTIAAHGVHLSDRDLEILSKYDVSVVHNPSSNLKLSSGFLDCTRVINKGINLAMGT DSSASNNNLSMLKEISIASLVSKYKDPKNLRAYDVLKMATINGAKALGIDKETGSLEEGK LADIILIDLNNPNHTPQNNLISSLSYSTFDTDVSYVIINGELVYDNKKFVNLDIEEIMKN SKLAFDNLRKRK >gi|325481212|gb|AEXN01000011.1| GENE 251 226435 - 226644 129 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYEKNQRKSQSTTSKCIVERKNRRNLRAGLVLLLFIMNILIENVKILTMADGEVIKNGNI YIEDRKIKK >gi|325481212|gb|AEXN01000011.1| GENE 252 226566 - 227987 1533 473 aa, chain - ## HITS:1 COG:TM1273 KEGG:ns NR:ns ## COG: TM1273 COG0064 # Protein_GI_number: 15644029 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Thermotoga maritima # 1 468 1 477 482 422 45.0 1e-118 MKTRTIIGLEIHVELSTKTKMFCSCKNEFGAVPNTNTCPICLGHPGTLPLINKEAVRYAI KAGLALDCEIRQSMKMDRKKYFYPDLVKGYQITQQDEPYAIGGHIILSDGDEIRLNSIHM EEDTAKSNHDENNNTLMDYNRAGLPLIEIVTEPDMKSAKQAKEFVEKLAQTLRFLDVSDC IMAEGQMRCDVNINLENLETGERTAISEIKNLNSIKAIEDALLFETDRHKKMLENGEKSV KETRRWDDDSQSTISMRTKETANDYRFSIEADIPRIELSKEFIDEIKNNLPELPGAKAKR YIKEYKLSDYDAGLLSNDRKLADLFEKTNEIVKNPKEVSNWILTELSRRLNESEIEADQM NLSIENFAKLINLVLDNKINNNVGKKLLREIFESNEDPEKLSKERNLLQISDENFLEDIV KEVLEENQQSVEDIKNGKDRAFGFLVGQCMKKTKGKANPQQVNALLKERIGEI >gi|325481212|gb|AEXN01000011.1| GENE 253 227977 - 229386 1621 469 aa, chain - ## HITS:1 COG:CAC2670 KEGG:ns NR:ns ## COG: CAC2670 COG0154 # Protein_GI_number: 15895928 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Clostridium acetobutylicum # 2 464 10 474 485 343 42.0 6e-94 MDIKETINKFKNNEISVYENTKNILDKIKNDQYNAYISINEKDSLERAKYLDEKLKNKEE LGSLFGIAVSVKDNISYKNMKMTCASKMLEDFNPVFNAKVVENLLKEDAIIIAKTNMDEF AMGGSGETSYFGPIKNPLDENLIPGGSSSGSAVSVAKGDVLVSLGTDTGGSVRQPASYCN IIGYKPTYSLMSRSGVVSMANSLDQVSLFANNVKDLRTIANTCQSPDKFDMTSCLEKYEY KEENFDFSGKKIAVIKNESNIYNLDKEVEDDYKHAIEILKEMGAEIIPIDLKYSKYANEV YNVVMSSEVSSNLSRFDGIRFGHQTDEYKNVEELFIKNRSEGFGENVQRRIALGTMYLSS EDDQRIYKQGLKLRTLIVEEFKEIFKNYDLLITPTTVDLPSKLGIYVDDPLKDFTSDIFN VCVNLTGSCGVSIPVRKGISGSIQIIGDRFKDNDIINACETFERKINED >gi|325481212|gb|AEXN01000011.1| GENE 254 229396 - 229674 415 92 aa, chain - ## HITS:1 COG:no KEGG:Apre_0980 NR:ns ## KEGG: Apre_0980 # Name: not_defined # Def: glutamyl-tRNA(Gln) amidotransferase, C subunit # Organism: A.prevotii # Pathway: Aminoacyl-tRNA biosynthesis [PATH:apr00970]; Metabolic pathways [PATH:apr01100] # 1 92 1 92 92 97 55.0 2e-19 MDKNEVFRIYKLANLDLSNQDVELISNKYNKILDFIDHIFDVDCKDVKMTEMLDNHEAIL REDIPGKSLDRKDALKNAKDTEYGYFRLDWKL >gi|325481212|gb|AEXN01000011.1| GENE 255 229675 - 231681 1917 668 aa, chain - ## HITS:1 COG:CAC2673 KEGG:ns NR:ns ## COG: CAC2673 COG0272 # Protein_GI_number: 15895931 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Clostridium acetobutylicum # 5 665 7 669 669 635 50.0 0 MDSKNKIKIDELIDKINELNYHYYTLDEPMVSDGEYDKLYDELRELENSTGYINAFSPTQ RVGGTILDKFEKHFHITRLYSQDKSQNIDQLKDWIIRTKKLRDQYNNSHDDKLEKLEFLT EYKFDGLTINLTYENGLLKTASTRGNGIVGEDVTKQVLTIPTIPTKIKEKSLLEIQGEAV MPLSSLKKYNEENEIPLKNARNAAAGAIRNLDTSQTRKRNLKAYFYQISTNSLDFKTEED KLNFLEEQKLPVYPYKKLIKNFDEIVKEIDYIKEERHHIDVLTDGVVIKVNDVKTQEVLG YTNKFPRWSIAYKYDPEEYTTKLLDVVWNVGRTGKVTPSAILEPVDFSGVTVQRATLNNY DDILRKKVKIGSQVFIRRSNDVIPEILGVVDENQENTVEIKKPTKCPYCHSELIEGNVHI YCPNSISCTPQLKARMVHFASRDAMDIEGLSEKTVELFINELDIKEIYDLYDLKYEDLID LESFKEKKTNNLLQAIENSKECDLNHFIYAIGIPNVGVKTARDLAEKYKSLENLRNAKED DLVEVEDIGEKTSHDIVEFFNDKNIKESIDKLLEKGIKIKEIEESEVSNFLEGMKIVITG SIENYKRNDIKKLILDHNGDVTSSVSKNTDLVLCGEKPGSKKEKADQLGIKVLENEELFE FIKNLEED >gi|325481212|gb|AEXN01000011.1| GENE 256 231683 - 233872 2039 729 aa, chain - ## HITS:1 COG:SA1721 KEGG:ns NR:ns ## COG: SA1721 COG0210 # Protein_GI_number: 15927479 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Staphylococcus aureus N315 # 3 728 5 727 730 594 45.0 1e-169 MDLSNLNDKQKEAVLHEKGPLLVVAGAGSGKTRVLTTSISYLIKEKFVNPTNILAITFTN KAANEMKERISNLLNEDVSHLWIGTFHSICARILRMNINKIGYDNNFTIYDTNDQKTLVK EIIKDLNYKDEISPKEALNVISFCKNKSISPEEFLNINTFYAKQEEYYKIYKNYEKKKFE YNSLDFDDLILKTLDLFAIDPDTLKYYQNKFEYVYVDEYQDTNKSQYELIKAIGKLHNNI TVVGDADQSIYSFRGADINNILDFEKDFKNAKTIKLEQNYRSTSNIINVANKLIRNNTER KDKNLWTSQNDGSEVLYKKSSVESEEGKFVIDEINSLLNDGYKLKDMAILYRMNAQSRIF EEYLMKNLLDYKVVGGLKFYDRKEIKDLISYLKVLVNPKDDISLKRIINEPKKGIGNKTI ENLEKEASKLGFSLTELVCDPSLFSNLPTKLKTSCEKFYNPLSETFDNYEDYKIVDLIEE VLDKSGYIKALEESYSVENRSRIDNLNEFISSAAEYESNNPEDNIHDYLENLSLLSDLDK TEESDDSISLMTIHSAKGLEFKVCFVVGMDDGLFPSKRSIDEGNIEEERRLCYVAITRAM EKLYLSSAEIRRQFGQAVYYKPSRFLSEIKSSIKQIDQDKTPAYSPYVKMRSNEAYMRDK ARESVLKKNTVKESSKEEFNIGDKIIHTKWGEGMIVQIKKSDDGNELVVAFDKKGLKKLN QDYAPIKRI >gi|325481212|gb|AEXN01000011.1| GENE 257 234025 - 234342 520 105 aa, chain - ## HITS:1 COG:lin1875 KEGG:ns NR:ns ## COG: lin1875 COG4496 # Protein_GI_number: 16800941 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 94 1 94 98 108 58.0 2e-24 MTDSKLQSKDLDEFFDAILMLKDRDECYKFFEDACTARELQSISQRLQVAKLLKIRKTYS EIEEQTGASTATISRVNRSLHYGTDGYDLVLEKLIANNLKEEKNK >gi|325481212|gb|AEXN01000011.1| GENE 258 234352 - 236001 2018 549 aa, chain - ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 549 1 556 556 590 55.0 1e-168 MKKDIEIAREADIKDIDQIAAYLGIDDYEKYGKYKAKIKPNFEKKSDSKLVLVTAISPTP FGEGKTTMNIALSMGLNKLGKKSISVLREPSLGPSFGIKGGACGAGYSQVIPMEDINLHF TGDFHAITSAVNLVAAMIDNHIYQGNEKNIDLNNIVWKRCVDLNDRALREVVVGLGKKTN GIVRQDGFDITVATEMMAVFCLSNDLFDFKKKVSKMIVAYDYEGNAVTVEDIKATGPVCV LMKDALKPNLCQTLENTPAIIHGGPFANIAHGCNSIIATKTALSISDFAVTEAGFGADLG AEKFYDIKCRKADLKPNMTVVVATIRALKYHGGQDLKNIDQENIENLKKGFKNLQTHLEN LKKFSNNIVVAINKFDQDTQEELDTLKNLVEGLSLKAFECDVYHKGSQGCLDICEYIIEN SKNDNNFKVLYDENLPIEDKIEIIAKEIYRASGVNYSKKALNEIKRINILNSNNLPICIA KTQYSLSDDPKNLNPDSEYEITINDIRLNQGAGFIVALTQNILTMPGLPKRPAAYDIDID NQGNIIGLF >gi|325481212|gb|AEXN01000011.1| GENE 259 236104 - 236754 731 216 aa, chain - ## HITS:1 COG:SP1590 KEGG:ns NR:ns ## COG: SP1590 COG3442 # Protein_GI_number: 15901432 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 203 17 216 260 214 57.0 1e-55 MIINICHLYGNLLNTYGDVGNVMALKYFAQKKGHQVNVDVVSLKDDFDYKKYDFVFFGGG QDYEQSIVEKDLEDKKENIVKYIENNGLFLAICGGYQLMGQYYYDAYDNKIEGLKIFDYY TKNQENANRFVGNIEIKDNKNGQIYRGFENHGGVTFLKKKENAFASVIEGNGNNGEDKTE GFRYKNTFASYLHGPLLARNENLVNTFLDIIENNKS >gi|325481212|gb|AEXN01000011.1| GENE 260 236751 - 238082 1179 443 aa, chain - ## HITS:1 COG:L114717 KEGG:ns NR:ns ## COG: L114717 COG0769 # Protein_GI_number: 15673088 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Lactococcus lactis # 1 440 1 438 449 361 41.0 2e-99 MSIKENLIIKVAKLSRFLLKITNHKATSLPGKIAYNLDKDILKTLSENTKFIFVTGTNGK TMTTHFISNILRNHYNHVFTNDSGSNMIQGIITSLLDNDKNENTVAVLEVDEANLVRVSK FLKPDYVVLTNIFRDQMDRFGEIYNVYKKILSGLEDLDNVKIIANGDLPIFSYDSLKNYK PIYYGIREDNKISNSYDLDAEFNSDGILCPKCNSVLKYDLVNYSSLGDFSCPTCDFHSPK LDYRINEIINMEANFSKFIVNGKEYETQIGGFYNIYNALSAISLANELEIPYEKIYNGLK LQEHVFGRQEVIDIEGKEVVINLVKNPTGLNQIINLMLLEDKPISLYCILNDNYADGKDV SWIYDSYYEKLKILDIKSIKVSGIRKADMKRRLEIADIFDGEIKEFDYEEEIFEKIKNES SDKIYILSTYTAMLRLREVLKLK >gi|325481212|gb|AEXN01000011.1| GENE 261 238181 - 238885 765 234 aa, chain - ## HITS:1 COG:SP0965_2 KEGG:ns NR:ns ## COG: SP0965_2 COG4193 # Protein_GI_number: 15900842 # Func_class: G Carbohydrate transport and metabolism # Function: Beta- N-acetylglucosaminidase # Organism: Streptococcus pneumoniae TIGR4 # 91 230 9 152 156 82 35.0 5e-16 MIKNKNLKISFLSLLAIILVLVLSTGLEGSSFAAKNKDKRDNLIGGVNEISNETLSLKQS RLKRFEKLEKDLEELKNNDSDKISKNSMLYLTNKTNLTAEELEYGLKNTNLQGLGKDFKK AEEKNGVNAILLMAMAKHETGNGHSYLAKEKNNLFGFNAIDQDPINAATKFKDKGESIAH VAKFLKENYLSEKGKYYNGISTKAIGKLYASDPEWSDKVDYMMIEVSKNIISEK >gi|325481212|gb|AEXN01000011.1| GENE 262 238966 - 239535 904 189 aa, chain - ## HITS:1 COG:TM0331 KEGG:ns NR:ns ## COG: TM0331 COG0461 # Protein_GI_number: 15643099 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Thermotoga maritima # 6 188 4 184 187 169 48.0 3e-42 MDRTIELLKKSDALLEGHFLLSSGKHSKKYIQCAKLIENPVYCQEVAEKIAQRVKEAGIK VDLCVGPAMGGIIIAYEVARALGVKAIFTERVDNIMTLRRGFDIKEGTNVIIVEDVITTG KSSFETVDVVKKYGAKVNALTSIVNRSSGDEINGLKLLSATKLDIETFDPDKLPEDLKDT PAVKPGSRK >gi|325481212|gb|AEXN01000011.1| GENE 263 239578 - 240039 509 153 aa, chain - ## HITS:1 COG:CAC2650 KEGG:ns NR:ns ## COG: CAC2650 COG0167 # Protein_GI_number: 15895908 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Clostridium acetobutylicum # 1 152 135 286 298 152 53.0 3e-37 MAFGTDPMKACEVIEKVRKTTKKVLMVKLSPNVGDIKEFVKIAENSGADCISLVNTFNAM AIDVDNKKAVFENKTAGLSGPCIKPIALRMVYEASKATSLPIIGMGGISNYKDCLEFIMA GASAVQVGTSNFVDFNTMTNIIEDLETYMKKKN >gi|325481212|gb|AEXN01000011.1| GENE 264 240162 - 240443 389 93 aa, chain - ## HITS:1 COG:CAC2650 KEGG:ns NR:ns ## COG: CAC2650 COG0167 # Protein_GI_number: 15895908 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Clostridium acetobutylicum # 4 90 3 89 298 124 64.0 3e-29 MSLKVNVCGVEFKNPIIAASGTFGFGKEFADYIDLDKLGGISSKGLTLHKNLGNKGIRIY ETASGIMNSIGLQNPGIEYFIKEELPFLEKKTQ >gi|325481212|gb|AEXN01000011.1| GENE 265 240443 - 241051 679 202 aa, chain - ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 11 201 46 242 246 162 46.0 4e-40 MLRCDSFRNSPLLSRPFGVCDQDDETMSFLYQVKGVGTKILSDLKEGSKVKLLGPLGKGF EIKKGKKAAIVAGGIGIAPLLYLAKSLDQKADFYAGFSDEEYFTDYFKDYVEKTTVTIDK KDKIFITDKIDTEKYDIIYACGPNPMLKTLSTKNKNTEIQISMEAHMACGIGACLGCTVE NSKGEFIRVCKEGPVFDSKEIF >gi|325481212|gb|AEXN01000011.1| GENE 266 241145 - 242011 1088 288 aa, chain - ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 3 283 2 283 286 281 52.0 8e-76 MKLMERLYKKVEKNGFVCVGLDTSLDYIPEKMKENKSICDQLFDFNKEIIDNTKDVCAIY KLQIAYYESYGIEGMKAYKKTLSYLREKDLLSIADVKRSDIAQSASQYAKAHFSGDFEAD FMTLNPYMGMDSISPYLEFIKNNDKGVFVLLRTSNPGANDFECLKLKDDSELFYTIGDKL KELNDKLVDDSGYGPIGLVVGATHKEEVEKIRKRYKNMFFLIPGFGAQKADSLNVYNLLN SLNGGVVNSSRAILKNYMNYEDGQDKVGFYAREKCIETRKEIQDNAIL >gi|325481212|gb|AEXN01000011.1| GENE 267 242115 - 242543 515 142 aa, chain - ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 138 1 138 146 127 51.0 5e-30 MLEITSLKKGIVIDHIKTGLGIKIFNLLHLDEIEDEVALILNANSTSNGKKDIVKIANNL DINLDAVAIIDPSATVNFIEDEKVVIKKNIELPEKIEGILKCQNPSCITANERNVESKFI LIDRKEKMYKCNYCDHIYDVEE >gi|325481212|gb|AEXN01000011.1| GENE 268 242536 - 243465 1052 309 aa, chain - ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 1 304 1 304 307 379 60.0 1e-105 MLKIKNLLSAEDLYKDDLIEIINLAEDIMRSPQQFSNYCNGKLLGTLFFEPSTRTRLSFE SAMLRLGGGVEGFSNPKASSQTKGESLQDTIKTVSQYVDVIAMRHPHEGAAKLSAESSDC PIINAGDGGHQHPTQTLTDILTISTYKNKLEGLKIGICGDLKYGRTVHSLLKVMTMFKNN EYVLISPDELKLPNYIKKSVFEKNNIEYIEKRSLDNSIDDLDILYMTRIQKERFFSDNQY TRLKDSYVLTREKLANAKKDLAILHPLPRVNEIDKDVDKDPRALYFKQVKCGMYARMALI IKLLEANNA >gi|325481212|gb|AEXN01000011.1| GENE 269 243523 - 244056 646 177 aa, chain - ## HITS:1 COG:no KEGG:Apre_0779 NR:ns ## KEGG: Apre_0779 # Name: not_defined # Def: adenylate cyclase # Organism: A.prevotii # Pathway: Purine metabolism [PATH:apr00230] # 1 175 1 175 176 159 59.0 4e-38 MDRELEIKVLKIDVEEMKKKLEEKGAEFIGVEIQKNHTFAPKNASEFSNGYLRIREKTLN DKREKTELTFKESVDSKDKVRVNNEYTTTIDSTSNMIKILEEIGLVEKYVGDKERISYSY KGQKFDIDIWSKNVYPEAYMEIEFTNLNLMDEILDEFEIDRENVTTESINELIENYK >gi|325481212|gb|AEXN01000011.1| GENE 270 244056 - 244736 652 226 aa, chain - ## HITS:1 COG:CAC0640 KEGG:ns NR:ns ## COG: CAC0640 COG1768 # Protein_GI_number: 15893928 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase # Organism: Clostridium acetobutylicum # 2 225 3 228 231 196 47.0 3e-50 MIYAIADLHLDYTEKKSMEIFGKARDNYQDKIFNNWNKIVKKEDTVLISGDISWAMDIYN AFIDLKKLDQLNGRKIMLKGNHDYWWQSLKKLNDLELETIDFLQNNSFFVEGYDICGTRG WISRDNSEFTDHDEKIFKRELQRLKNSLQYNRENKKKIVMLHYPPINSDRTLNEFFGICK DFQVKCVIYGHLHGQGHKQIIEGIVDGIEIKCVAGDYIDFLPERIS >gi|325481212|gb|AEXN01000011.1| GENE 271 244733 - 246640 1647 635 aa, chain - ## HITS:1 COG:no KEGG:Apre_0777 NR:ns ## KEGG: Apre_0777 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 635 1 617 617 344 38.0 8e-93 MNKIFIKEINLISFGKFQNKTIILKPGFNLIYGNNESGKSTISDFIEGIFYGFDVGNNKR NFSYKKEKYKPIGSYKYAGNMILSSDGKDYRIERNFEDGSYKIFDLSINKEIESKKSNLS YPGEYFLDLNYSLYKSIIDNYQMQNIDKDSKKKLVDFLKNPSSDLVFSQLKAVENIEEIL NKIGSPRAYTKPFAKNKKELEEKYKEIENIKNIRRSYNSDIVKLKKQREDINNIKNILEK LKNDRDNYRKYKANSNYIEYKSRKDSLALLDEKLKKYRKFETIDKLYFEKVDGLLERKAE FYRESNKKNNYSLLIISSLLLIVSIFTKKYYILFFIIPILIYYYFKTKSMDINKKEEINN LNIKISNEFSKISVSTKSLYEKAKEDYKEYEKLIIERDKILEILKILEKQEISDDISEFD IEDFNISKIEEEIKKYEKSYSTLLENNLKLEKKLAKIEDEISKEIDLGDDINRLKREEKD LEIEIKASKKAIEIIKLNENKLNHNRKNISNRISEIIGQISMGKYINIGLDDRLNPIIYN ENNEIISLDKLSVGFFDQVNFSLRFSISNDLIKSSFLIFDDAFINYDNKRLRTALLYLLD LSNQFQMIYFTCHDREEKILKAEGIEIEVKDMDKI >gi|325481212|gb|AEXN01000011.1| GENE 272 246633 - 247679 673 348 aa, chain - ## HITS:1 COG:lin2325 KEGG:ns NR:ns ## COG: lin2325 COG0420 # Protein_GI_number: 16801389 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Listeria innocua # 5 258 3 277 411 87 28.0 3e-17 MCEFDMKFAHISDIHLADKLSFSSKYSKLIRKVRWDSFEKILKDNQDKDFLLISGDLYER DFFTLKDYQKLFDLFRDFKKDIYYICGNHDYIDSKNEIFFLDIPPNLHIFSSERIEFFEQ KNIRFYGISYKDRIFDKRFNYNINLNHDYFNIFLGHGEFDQINSSYMNLDLEKIKEMGFD YVGLGHIHKRKSFSDKIFYVGSIEPSSFKDKSEFGYNIFEDGRVKFINSSQMTFKELDLD LNDYKNYQDFEIYLDKILDKKYNFLTLNLSNYDKIFINEKKLKDKLNLSYLKIKFLKNKD YYFNMAKIYNNTLLSDFYKSIKDLDMDDDINKRCLEIGFDAILRSKNE >gi|325481212|gb|AEXN01000011.1| GENE 273 247661 - 248230 742 189 aa, chain - ## HITS:1 COG:CAC1385 KEGG:ns NR:ns ## COG: CAC1385 COG0406 # Protein_GI_number: 15894664 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Clostridium acetobutylicum # 1 187 2 190 191 83 28.0 2e-16 MKIIFLRHGLTESNKEWRFSTPETRLAKNAGIDLCKSRENLKKYKIDKVFTSKLIRSQET AKFLGFDKFIEDERLNELNFGDFRGQKVLDTRKKYKDFYEKLRKDPYTTRYPNGESVKDL VNRLNDFMEEKSSFDGNILCVSHGIAIRSSLFTVLKDLDNFKNFWIDNGSLTVFDISDNK KMIECVNLI >gi|325481212|gb|AEXN01000011.1| GENE 274 248283 - 249374 1013 363 aa, chain - ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 2 363 760 1136 1136 229 36.0 7e-60 MTKITLRNLFRYKARMFMTIFGIGGCTALLFFGFAMTDSVKDTSKIQRGQITKYDYISLF DENAKESDKKAYQKILNDAKSLKILYKKVDVSTKEGNIKVNLIVFDDVSKVDKFINIRDE KKNKINFNDKSVIISKNLSKNVNLDKDLEFDLDNKTKKVKVKDISENYIDDYIYMSKDAY KNIFNKNVSFNGDIVKSDKKTKDRILSNKISQALIEPNKFYESMDSLMANLNLVIAIITL VSMILAVVVLYNLTNINVSERKKELATTKVLGFYPRETTAYIYRETYILTILGIILGYIL GYIMLRYVLNVVAPDGIFISNKTHLSSYVISAFITLFTSFLIMIIVHFKLKKINMAEAMK AGE >gi|325481212|gb|AEXN01000011.1| GENE 275 249421 - 251784 2036 787 aa, chain - ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 1 784 1 739 1136 223 27.0 8e-58 MKKNNYYKSIFRDIKNTKGKILSIFIMIMLASMVVVALFMTGPSMRKTLGKTLNKNKHPD ISIRASYGIKNEDRLIIEKDKDIDKISYRNNLDLYAKDKLVSVKSFDKDIEKLNIIEGKK ISNDKEIILDKLYKDDYKIGDYISFKALEDDKINDLLKNKTYKVVGFANSSEYLMEDLRD MSIKGKEMVYGFAYINKNNFKKDLISQVDITYKKTRNMDRFSSDYKKFVKNKRKNLKEDF KNRPSQVLKKLKDDTNEKLDKKEDELNDNEKKLKDEKNKLIDANQKLLDGISAYNKAENE YKIKISQGENSLTTSKNKIDQGFKKLNEGKIAYKRNLDSFNKNIGENEKKLEDSKIKLDE GYKELNKNYDEIIANKSLIENSFSDKKTSLDSLAKKIDDENLSLSNDEKSLDDINLKIQN VSIKLETLSNASDNNLNKDQILKLKNELESLNEKKSNLYFKIEKSKRMISASNSEYNKGK EEFDLSYNKAMDPINENLGKLDKVKSDLDNKKSLYETSVKKLNDEKDQSSKKLSQAKKEL DKNEEKLNSSLNSYQKGLREFNYQKENGKNQLAKNFNDLLENQRKLDQANKKFDEESKKA QKEIDGGYKKIKDARENLVNLVDPTYEIDDIFSNKSIDTYYKNSLNMDELSKVFPTFFYF IALLVSLTTIKRYIEEQRVQNGTLKALGYSNFDIGRKFFIYALIPTILGSILGCFIGKYL ICKIIFNAYSSGFDILSLGFINSFWIALLTIFLSTLLISLTVYFTSISEVKEQTADLLRP KAPKKRF >gi|325481212|gb|AEXN01000011.1| GENE 276 251786 - 252487 331 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 217 2 218 245 132 36 2e-29 MAYIELKNVYKYFKVGKNKIVANNDINLSIEQGELIIIVGASGAGKTTLLNMIGGMDTLS QGEIIVDKKELSNMNEKDLTRYRRDDVGFVFQFYNLIPNLTSIENVELASEIAKDNMDAS KALDEVGLSNRKDSFPSQLSGGEQQRIAIARAIAKNPKLLLCDEPTGALDYKTGKSILKL LQNTAKNLNTTVIIITHNGAIKDIADKVFELKDGRIVNSYKNENPVNVEDIEW >gi|325481212|gb|AEXN01000011.1| GENE 277 252492 - 252935 467 147 aa, chain - ## HITS:1 COG:BS_yvaI KEGG:ns NR:ns ## COG: BS_yvaI COG0691 # Protein_GI_number: 16080413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Bacillus subtilis # 2 146 7 151 156 147 55.0 6e-36 MKILANNKKARHDYFLEEKYEAGIELKGNEVKSIREGKVSIKESHVGDYKGELFIYNMNV TPYKQSYEKNIDPIRTRKLLLHKKEIDKLIGKVSQAGYTMIVNKIYLKEGLIKAEIALAK GKKNYDKRETIKKNDAKRKIERALKNY >gi|325481212|gb|AEXN01000011.1| GENE 278 252937 - 255039 1438 700 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 699 1 703 730 558 41 1e-158 MNFKDLILNIVNDENYKPMTIKEMLKYLDCDKYIKKDVKKIIKKLAKDNEIKISSKKKIH PLSIEDKSLIGQINLAQGGYGFFISDNKDFKDVFISANNLNTANNLDRVRIKIIKNKEFG KNAEGKVVEIIERNSNKIVGLYQKNKGFGFVISDSNNISSDIYVDEKNSKKAKSNDKVLV DIINYPKKGSPEGKVIEVLGNKDEANVDLISIVKSHGLKENFSKKVKKEAVFIEKDVDLS KVKNREDLRDFFTVTIDGRDSKDFDDAISIEKDNENYILYVHIADVSHYVKEKSEIDKEA YQRGNSTYLYNLVLPMLPEELSNGICSLNPDKNRLSLTLKMKINDKGKVIDYKIYKALIR SDYRLIYDDVNDYLDYNKKVYDDEVLLEKLDLFNDLYKILKKKREKRGSIDFNFTESQID VSDQGDVLNISLFERGSANKMIEEFMLVSNETIASLFAFMDFPSIYRIHEKPKEEKVESF KNILNTLGYNIKGKELHPKDFQDILKQISGKDDESLINMLMLRTMRKAKYTNYRDMHFGL ATKYYTHFTAPIRRYSDLIVHRLVKDFIDNKLESINQTSLEKKLSKFAEHLSITERNSEE CERDVEDLYKCKYMKKFIGEKFEGIISSITDFGIFVELENTVEGCFMYKFSDSHFEYIED KLSSINIDKNKRYKIGQKVMIEVKNVDLDKRNIDFDLMEG >gi|325481212|gb|AEXN01000011.1| GENE 279 255117 - 255344 350 75 aa, chain - ## HITS:1 COG:no KEGG:Apre_0769 NR:ns ## KEGG: Apre_0769 # Name: not_defined # Def: preprotein translocase, SecG subunit # Organism: A.prevotii # Pathway: Protein export [PATH:apr03060]; Bacterial secretion system [PATH:apr03070] # 1 75 1 75 75 68 60.0 6e-11 MTTVLSVLLMIASVVLVIAVTLQEPKTDGLGTLAGQETNVFGRSAHRSKNEMLDKVVIFA GVVLFLLSTILLAIS >gi|325481212|gb|AEXN01000011.1| GENE 280 255454 - 256749 2089 431 aa, chain - ## HITS:1 COG:BS_eno KEGG:ns NR:ns ## COG: BS_eno COG0148 # Protein_GI_number: 16080443 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Bacillus subtilis # 1 431 1 430 430 623 75.0 1e-178 MSLITSVYARQILDSRGNPTVEVEVTTEEGGFGRASVPSGASTGEWEAVELRDGDKDYYL GKSVLKAVENVNEIIAEELEFTYDVSDQIGVDRAMIELDGTENKAKLGANAILGVSLAVA KAAADEQGVSLYNYIGGTNAKLLPTPMMNILNGGEHADNSVDIQEFMIFPLGAESFAHAL QIGAEVFHNLKKVLSSKGYNTAVGDEGGFAPNLKSNEEALEIICEAIKEAGYEPGKDVYI AMDCASSEFYNKEDGKYHLDGEGTVKTEDEMIDWLEELVEKYPIISIEDGLDENDWEGWA KLTQRLGNKVQLVGDDLFVTNTKKLEKGIKEGVANSILIKVNQIGSLTETLNAIEMAKEA GYTAVVSHRSGETEDTTISDLVVAVNAGQIKTGAPSRTDRVAKYNQLLRIEDELFDTAQF KGLKAFYNINK >gi|325481212|gb|AEXN01000011.1| GENE 281 256771 - 257523 1086 250 aa, chain - ## HITS:1 COG:BH3558 KEGG:ns NR:ns ## COG: BH3558 COG0149 # Protein_GI_number: 15616120 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Bacillus halodurans # 1 250 1 251 251 265 51.0 5e-71 MRTPVIVGNWKMNMTPSQAKTLLEELVKLDLDESVEKGVCVPAIDLLLASEILKDSDIKF GAENMHYEESGAYTGEISPTMLNDIKADYVILGHSERREYFKEDDELINKKVLSALDHDI TPILCVGETLEEREANKQEEKVKDQLEKDLKGIEGSDITKVIIAYEPIWAIGTGKTASAE DADDMCLFIRNYIKEAFCEDCSQKIRIQYGGSMKPNNVKELLAKENIDGGLIGGASLKAE DFEKLVNHKK >gi|325481212|gb|AEXN01000011.1| GENE 282 257533 - 258729 1762 398 aa, chain - ## HITS:1 COG:CAC0710 KEGG:ns NR:ns ## COG: CAC0710 COG0126 # Protein_GI_number: 15893998 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Clostridium acetobutylicum # 2 398 4 397 397 429 59.0 1e-120 MNKKTVKDLNVDGKRVLVRVDFNVPLSKDGNNTISDDTRIKAALPTIDYLLENNAKVILM SHLGRPKGEAKPEFSLKPVANWLEKHYGDKFHFIPSDTVVDEKVKEEASKLNNGELALLE NTRYVAGETKNDPEFAKELSSLADLFVNDAFGTSHRAHSSNVGVASNLESAVGFLIEKEI EIMGKALENPERPFVSILGGAKVSDKIGVIENLISKVDYILIGGGMAYTFLKAQGKEIGK SLLEEDKMDLSLELIKKAEANNVKILLPKDVVIADEIKDDAETEIVDIDNIPTDKEALDI GPETAKEYADIIKDAKTVVWNGPMGVFEVKVFANGTNEVAKALADSSATTIVGGGDSALA IEQAGFKDKITHVSTGGGASLEFLEGKTLPGIDCIDEK >gi|325481212|gb|AEXN01000011.1| GENE 283 258777 - 259784 1473 335 aa, chain - ## HITS:1 COG:FN0652 KEGG:ns NR:ns ## COG: FN0652 COG0057 # Protein_GI_number: 19703987 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Fusobacterium nucleatum # 1 329 1 327 335 424 66.0 1e-118 MTTKVAINGFGRIGRLTLRRISEVEENIEVVAINDLIDKKGLLYAFKYDTAQGRFNGDAE LTEDGFKINGKEIKVFAERNPEDLPWKDLGVDIVLECTGFFTEKEKAEAHIKAGAKKVLI SAPGKGDLKTIVYGVNHEILDGSETVVSGASCTTNCLAPMVNVLKNEFGFVSGQMSTIHA YTATQAIQDTPASKKDLRGGRAAAQNTIPASTGAAKAVGKVLPEVEGKIDGSALRVPTIT GSITELYSVLEKKVTVEEVNAAMKKYSSDAFAYTEDDIVSSDIVGYPAGSVFDSQLTKIV EGANGTQVVKTVAWYDNEMGYVSNLVRTLDYLANL >gi|325481212|gb|AEXN01000011.1| GENE 284 259859 - 260785 569 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 305 1 305 306 223 40 5e-57 MLDVIIIGAGPAGLTAGLYAGRAKLKTLILEKDISGGQIATTEHVENYPGSMKGAGGLAL SERMEEQAKQFCDIKYKEVTKVDLTSDIKKVYTKDEVYEAKVVILSTGASHRKLNVKGEK EFANLGVSYCSTCDGPFYQGLDIYVVGGGEAALEEALYLTKFGKSVNIIHRREGLRASQT VIDRCKENEKINFLLNYTVNEIKGDTEVKELILKNTQNGELKSIKNDDNSPIGVFIYIGN IPQTDLFKDQVKLENGYIPTDEDMKTNVKGVFAVGDTRVKKIRQMVTATSDGCIASEMAN KYIENGEW >gi|325481212|gb|AEXN01000011.1| GENE 285 260799 - 261257 594 152 aa, chain - ## HITS:1 COG:BH1023 KEGG:ns NR:ns ## COG: BH1023 COG0219 # Protein_GI_number: 15613586 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Bacillus halodurans # 2 150 3 153 157 145 45.0 2e-35 MFNIVLISPEHPGNVGNISRTCVLTESRLHLIRPFKFDFSNKSLKKAGIDYWDKLDLVVH DSLDEFYTYVKDKNIYLIETGSDKNYADISYKDGDYFIFGREKEGIEKEILDKYKEKIYT IPMTNKLNRSLNLANSVAIVLYEGLRQNNFKI >gi|325481212|gb|AEXN01000011.1| GENE 286 261250 - 261927 632 225 aa, chain - ## HITS:1 COG:CAC0698 KEGG:ns NR:ns ## COG: CAC0698 COG0561 # Protein_GI_number: 15893986 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 2 216 55 269 276 80 28.0 2e-15 MDLTGIDNPMVTNNGALAFINKENLIYENPLKHEEVKELINFSESNKFFYQFYDKDTYYS NRIWPERFDHLENNSSYGMNFQVNFSFSTKPLKELELRKDSAFKFQIFPDVNKPEEERKI LEKVADMGLYPTTSAFGMIEIMQNNVNKYRGLSKIGNLLGISKEEMAAIGDQDNDIPMLS NVGLSFAMGNAIDEVKKISDYIVSSNDDFGLVEAINIVLEKNSNV >gi|325481212|gb|AEXN01000011.1| GENE 287 262079 - 262744 596 221 aa, chain - ## HITS:1 COG:CAC0689 KEGG:ns NR:ns ## COG: CAC0689 COG0177 # Protein_GI_number: 15893977 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Clostridium acetobutylicum # 11 219 1 208 211 243 59.0 2e-64 MISGKEVIVILNKKQINEVIERLDNLYPNLEKSFLDFTTPFELLVATILSAQCTDVRVNK VTNHMFKYANKPEDFSKMDIKEIEDYIKTCGLYKNKAKNIKNASIMLIREFDGEVPSNMK DLIKLPGVGRKTANVVMSNAFGIDAIAVDTHVQRVSNRIGLAHSKDVLNTEKDLRKNLPK EKWSKLHHQIIAHGRKICKARNPLCEECDLRDLCEDYKERK >gi|325481212|gb|AEXN01000011.1| GENE 288 262823 - 263974 926 383 aa, chain + ## HITS:1 COG:CAC1251 KEGG:ns NR:ns ## COG: CAC1251 COG0772 # Protein_GI_number: 15894533 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Clostridium acetobutylicum # 2 362 6 369 373 206 35.0 5e-53 MFNLKKKEFEKFDWPLFLSVAFLSIYGLIVLYSAFSGNILKIRSQIFASILGFIFIILIC TMDMDVIKKAAYPIYGISLALLILTIFLGQGEQQWGSNSWLILGPIQIQPSEITKVGIIF ALSAYLEKYKDDINDPKRLLFTIVFAGLPILFILLQPDFGTAMVYIFFIAVMLFLAGLSW KWIISLLLLAGVFGLILLLNLEGYRADRIHDFLDPSRDTSGSGWQQQQGLIAIGSGMFTG RGYMKGTQAQYGYIPEKETDYIFSVLAEELGFIGAVLMLVAFVIIIYRLLIISKNSKNSF ISFMVSGICAMFFIHIFENVAMTIGLMPVTGIPLPFFSSGGTFLLICFINIGLALSASMQ KSSYDIEDTSEYETIKFNSNIKK >gi|325481212|gb|AEXN01000011.1| GENE 289 264010 - 264546 753 178 aa, chain - ## HITS:1 COG:L86338 KEGG:ns NR:ns ## COG: L86338 COG4475 # Protein_GI_number: 15672471 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 178 3 180 180 185 52.0 4e-47 MDKIKNDIEAACLEILDKSHAKEGDVFVLGGSSSEVVGYNIGSHSSEEVGEIIVTTLLKI LNEKKIYLAVGGCEHINRAIVVEKNLAIRDRYEIVSVVPKIHAGGSFATAAYKNFKDPVV IEHISGDFGMDIGDANIGMHIKFVQVPLRLSVKNIGSAHLTALNSRPKLIGGIRARYE >gi|325481212|gb|AEXN01000011.1| GENE 290 264606 - 265235 642 209 aa, chain - ## HITS:1 COG:PAB2379 KEGG:ns NR:ns ## COG: PAB2379 COG1394 # Protein_GI_number: 14521958 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Pyrococcus abyssi # 5 201 6 205 214 80 30.0 2e-15 MTETKFAPTKANLMKAKSQLDLINEGYDILDKKRKALIGQYNAKINQRNELNKIVNSYIK DVKKNIKKAIVTTGEDRLKSIALSVPIDNSISLKEKKFMQTKIFEISFDEKKLDLSYSLN LTNSLFDEALISLNDLKEKVYKLAELDTTIKNLDTEIKKTSKKVNSLEKVQIPNYKSIIK SISGQIEEREREEFSKTKMVKDKKIQKGK >gi|325481212|gb|AEXN01000011.1| GENE 291 265228 - 266601 1716 457 aa, chain - ## HITS:1 COG:TP0528 KEGG:ns NR:ns ## COG: TP0528 COG1156 # Protein_GI_number: 15639518 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Treponema pallidum # 5 452 6 455 480 535 56.0 1e-152 MRKQYTRIKKIEASIIELEKVEDIAYNAVVKINTLGQNFIGQVVKIDDETVTVEVFGNTQ DFSLNDIVVEFEEKPLEIPLNESILGRTFNGIARPIDDGGEIYSDKFYSVEGNPLNPVAR EYPRNFIQTGISSIDILTTLIRGQKLPIFSGSGMPHNEIAAQIVRQAKLKTNEDFCFVFA AMGIKKDEAMFFEDAFTKAGVKDKVVMYENLADDPIMERLITPKCALTAAEYLAFEKNKH VLVIITDITSYAEALREVSSIRQEVPSRKGYPGYLYSDLASLYERAGMIEGVNGSVTLIP ILTMPNDDITHPIPDLTGYITEGQIVIDRMLDQKGIYPPINVLPSLSRLMKDGIGEGYTR KDHEDLMNQLYESYSKVQEIRNISQIVGEDDLSDVDKAYLKFGKEFESRFLSQDPYENRS LEQSLDLGWDILKILPIEEIHRVSPENKDKFLGDKND >gi|325481212|gb|AEXN01000011.1| GENE 292 266598 - 268349 2157 583 aa, chain - ## HITS:1 COG:MK1017 KEGG:ns NR:ns ## COG: MK1017 COG1155 # Protein_GI_number: 20094453 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Methanopyrus kandleri AV19 # 5 580 9 589 592 611 54.0 1e-174 MTPTIKSINGPVIQARNASSLKIREMVTVGDLKLIGEVVSIDGDLATIQVYEDTSGLKVN DEIIKTNRALSVRLGPGMIGNMFDGIQRPLDKIKAKHGSFIPSGLGLSNLDEERNWDVKI KVKNGDKINVGQIYATIDETSVIEHRLMSTVDGEVIEVKDDGKYKLEDTIVKVKTNHGVE NLKLYQYWPVRVQRPIKRSKQLSELLLTGQRVLDIFFPIAKGGTVAIPGGFGTGKTMLQH QLAQYSNADIIIYIGCGERGNEMTQVLEDFPDLIDPNTGRGLMERTILIANTSNMPVAAR EASIYTGITMAEYFRDMGYDVALMADSTSRWAEALREISARLEEIPAEEGYPAYLGSRLS QFYERAGDFDNLNGSHGSVTLIGAVSPTGGDFSEPVTENTRRSVNVFLGLDKNLAYSRHY PAINWLTSYSNYLNQMAGYYEDLTGEDIVLLRNSMMEILTEEEKLQSIVMLVGKDSLSNK QKNLLDVASMLKIAFLQQNAFNDIDKYVPLDKQIQMLKVIKNYYKLSNTAIDKGISYNKI YNKGLIAKINSMKYDIKNDELEKFVELNNNIRSYFQTLEEGEE >gi|325481212|gb|AEXN01000011.1| GENE 293 268333 - 268953 750 206 aa, chain - ## HITS:1 COG:no KEGG:Apre_1012 NR:ns ## KEGG: Apre_1012 # Name: not_defined # Def: H+transporting two-sector ATPase E subunit # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 1 200 1 201 201 93 37.0 7e-18 MLDLSAKISSFRKMVWSNEKRKSEKELYESTDSSSKTLNEMKDRLDKNYRKYIEKRKEFA NSRKNEKIANISQHKKTSYNKFKESLLNQLIDEIKDELIEYSKSEQYKEKLKIEASKVFK KLSEDNQDLILCVKRSDQDLFDFDTDIIDDTKIGGFVIKSKDLTYQYDYSLEKKLENYKY EIGSKFYKIISDEYEKEMEDENDSNN >gi|325481212|gb|AEXN01000011.1| GENE 294 268968 - 269204 280 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696099|ref|ZP_03304227.1| ## NR: gi|212696099|ref|ZP_03304227.1| hypothetical protein ANHYDRO_00635 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0731 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00635 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0731 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 78 1 78 78 132 100.0 8e-30 MKAKIITNDMSLLLGFRLGGIEGVIVEKENEISENFQKLAKEKDLALIIFSKFCYEKIKK EVEDYRVDNATPLVVVLD >gi|325481212|gb|AEXN01000011.1| GENE 295 269206 - 269631 734 141 aa, chain - ## HITS:1 COG:no KEGG:Apre_1014 NR:ns ## KEGG: Apre_1014 # Name: not_defined # Def: H+transporting two-sector ATPase C subunit # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 4 141 5 142 142 152 81.0 6e-36 MILVSILALACVVMTIYSGLYLLKNNEDGSKDKIRKALKINLSTFVPIMVMILVLVLPNG VKAAAAGSASDAGNGLKYIGAALSTGLATIGTGYAVGQVGSAALGAISEDASILGRTIIF VGLAEGIAIFGVIISIMILFA >gi|325481212|gb|AEXN01000011.1| GENE 296 269642 - 271057 1626 471 aa, chain - ## HITS:1 COG:PH1981 KEGG:ns NR:ns ## COG: PH1981 COG1269 # Protein_GI_number: 14591717 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Pyrococcus horikoshii # 29 469 198 647 659 122 24.0 1e-27 MNLLEKFGFKDRSRNNRDQSIESGNEDYLLVYPKSVEDEVNRTISSLGFIDKDIPDGKSI DEIRKEYEDNKAKLKEIDNKLKKIKDDNIDDLKNLPKTIDFYKKSSKLKDKMLKGRKYFY LSGWVPESKIQLVKDTVDKYEDSLVDQKKNSQTIANPPTKLKNNKITRPFEFLVNMYGAP NYNEIDPTGFFAITYMLLYGMMFGDLGQGLVFVLASFLIEKKSKIFGQLIRRIGFSASFF GLMYGSVFGIEDLIPTILIKPFDNIIKVLIASVAFGVILMVIAYILGIYNKLHKQKDFEE GVFGKEGFAGLLMMISFILIILNIVKVNPMPMIVSIILLILSIVMMVFKQPISRKLLDIY PIYDQSSSDYYIESSFSIIEALLSVFSNLVSFTRVGAFAINHVGLYMAFEVMSKLVGGGF IGIIILILGNILIIGLEGMIVFIQGLRLEFYEMFSKYYKGDGQKFSPISKL >gi|325481212|gb|AEXN01000011.1| GENE 297 271075 - 271947 1127 290 aa, chain - ## HITS:1 COG:no KEGG:Apre_1016 NR:ns ## KEGG: Apre_1016 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 290 1 290 294 183 45.0 8e-45 MAVEKMHLVNIMARLDNLDDFLEDLIDIDEFDQVDAFRQIQNREFSIRASEENIEKTEDF NDLESFDKVDPSFINKLEDIKDFLNLDDSKGGRRINDEKLKNLLEIFEENIEKKKALEER NDKLEEYLNNLQALENEEIDINKITSLNYFDYRLGEVSKDGRFILKNNYESIPSLIIHLQ KNDPDIEKNKEALKSIYSIDDETSKLRKDTDNIIKNEKDNVNKVSLELSKDYDKKTKEDA NKFYDDILKEADYKNKEIESFYEKRKVESEKVFKAKKENLVKEFFKKIIE >gi|325481212|gb|AEXN01000011.1| GENE 298 271952 - 272929 693 325 aa, chain - ## HITS:1 COG:no KEGG:Apre_1017 NR:ns ## KEGG: Apre_1017 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 1 325 1 326 326 180 38.0 1e-43 MKAYVVKAKAKLGKLPKKETCRDLLYEDSLERKLDIIRNNNSEIPNLSSKKDLEIFLSNK LYDDLYSFLKFLKGEEKEFFIKYISKFELQLMQLIVQAIINNHLDDSLDIIKREKFSHDI NVSKDDDFESFVRKSKSSKYYRTLYPFLNENIEKKSIIFLISNSLNKLYYRQLLEETKKL PKNIGFELKDFVGKQIDIFNIEMLYRLKKNFSLNNYEIFNYLIEGGKYLRTKDLKKLSSL DFNKFKDEILKTNYKDLFISTYNFYKAKEDLLSENSKKLSSSKYDLLNLIYIVDMMTISN KNIISILEFDETFDKDEKKHYIIKR >gi|325481212|gb|AEXN01000011.1| GENE 299 272950 - 274302 624 450 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|16079597|ref|NP_390421.1| hypothetical protein BSU25430 [Bacillus subtilis subsp. subtilis str. 168] # 22 437 8 423 451 244 33 2e-63 MQLKINEKYKDYFKGKKYNITTFGCQMNEHDSERISYILEDLGYTLTDDRNEADFILFNT CLVRENAELKLYGQVSSLKKLKEENPEKIIAVSGCMMQTSVAREVIEKKHKEVDIIFGTK NINSLPDLLFKYLETGERVIDVSEDNVKDDYVNYNSKNNFQAYVNIMTGCDNFCSYCIVP QSRGREESRRPSHIIEEIENLVNNGYKEITLLGQNVNSYGNKSDFNVTFPELLEKCAQIK GLERLRFTTSHPKDLSDDLIRVIKENDNICNYFHLPMQSGSDKVLKDMNRKYNKEQYLEK ARKLREEIPNIAISTDIIVGYPTETEEDFQETLDVCRKVGFDTAFTFKYSPRPKTKAAKL ETIDEKIVQDRFDRLLDTLYPVFNEKNKEYVGKVVEVLLESESKNNKNVLTGRTDTFKLV HVEADKKLIGQIVKVKITDNTSFTISGHLV >gi|325481212|gb|AEXN01000011.1| GENE 300 274373 - 276451 2516 692 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Anaerococcus prevotii DSM 20548] # 1 680 1 673 686 973 70 0.0 MKVIVAKNSGFCNGVRRSVDLANKASEKNIKTYTLGPLVHNPTQVQMLEDKGVGVIDENE VIKLNDSQIVIRSHGVREELKDNIRKNQNDVIDATCPVLLNIYKKIKEKENQGYKVVIIG DKNHPEIKAMASYINDGIIIKDETEAKNITNMSKLYVVSQTTNRIDFFENIAHELEKTND DVVIENTICNATRLRQEACKSLSKEVDCMVVIGGFNSSNTNKLYQIAQKYCKNVQRIETV IDLPLQKLSNFNIIGVIAGASTPDKVIEEVVNRMDDLTNEELMNSIEDSMKKIYPRDVVN GTIIDVKDDEVFVDIQYRADGIVKLDEMTEEEKENPKDHFEVGQEIEVYVIKLDDGEGNV ALSTRRVEGMKNWKNLREAFENDQTVEGDITGSNKGGLTARVMGINGFVPASQIAPYFVK NFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVITGKVARLTDFG AFVEIGSLDGLLHVSDIAWTRVEHPKDVLNIGDDIEVKILKLNKEKNRISLGRKQLLEKP FAEFTNNHEVGDVINGKVVNLLDFGAFVEVSEGVEGLIHVSEISWEHVEKPSDELTVGDE VEVKILSIDPEEEKIGLSIKALKEAPERTERKPRKNNNEENKNRSNAKAKRRAEKKESNN EFGDNDLNNNIGFAIEEVLSGIEIEDEDSTEE >gi|325481212|gb|AEXN01000011.1| GENE 301 276453 - 277043 685 196 aa, chain - ## HITS:1 COG:BH1635 KEGG:ns NR:ns ## COG: BH1635 COG0204 # Protein_GI_number: 15614198 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Bacillus halodurans # 18 191 19 193 195 113 35.0 2e-25 MFYRFIYFLIRLIVTPIYRIKVHGIENIPKDQKYIICANHKSLLDPVFVALAVNRQVHFI AKKELFEIPILKSILKKLKALPAQRDGKDLSVLRDSIKLIKEGKILGIFPEGTRVKEIKR ENIKDGAGYIALKSKTDILTIEIISSYKPFRKTDLYIKNPVKVENFKKYKSKDAMEKLMD ETYEKMYENHKFLRKV >gi|325481212|gb|AEXN01000011.1| GENE 302 277033 - 277683 268 216 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 1 206 32 279 863 107 31 4e-22 MNNFIIALDGPSGSGKSTIANLLAKKLKISYLNTGSMYRALTLYLLENNIKKTDDFDKNI LENINIDINKDKVFLNGEDVSKEIRDKEVTENVSWVSSMPEVREYLVEMQRNISNNKSII LDGRDIGTVVFPNAKYKFYLTASSFVRAKRRFDQKEIAKSFEEIKEDIEKRDYLDSHRKI SPLKKADDAIEIDSSDLTIAQTIDKIIENMDKEDVL >gi|325481212|gb|AEXN01000011.1| GENE 303 277676 - 278899 1328 407 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 22 402 9 391 393 333 48.0 5e-91 MDIGIIGAGAAGVFTAINAKNKNNKVSIIEKNKQIGKKLFITGKGRCNITNAKFFDEFLD NIVVNKKFMYSSFTNFDNYALMDYLENKGLKLVVQRGDRVFPKSEKSSDVIKFFENLIKK NHIDIKLNEKVEKIIKDEKGKFIVKTNKDTYSFDKLVIATGGLSYPLTGSTGDGYKFAKE FSHNLIETKPALCPIKFKDKDLDSLNGISLRNVSLNVETKDRNFSEFGEMLIGKDFITGP IVLTMSSLINKSQIKDLYIDLKPALDFEKLDNRIVRDFENDLNKDIVNVLKNLLLNAFVE VILERAKIDFHKKVNQITKEERYELIDVIKHFKLEFNGLSHVKNAVVTSGGVDCKELNPK NMESKKVSGLYFVGEVTDVDALTGGYNLQIAFSQAYACAEDLRSFNE >gi|325481212|gb|AEXN01000011.1| GENE 304 278905 - 279600 676 231 aa, chain - ## HITS:1 COG:SPy0369 KEGG:ns NR:ns ## COG: SPy0369 COG1187 # Protein_GI_number: 15674518 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Streptococcus pyogenes M1 GAS # 1 231 1 235 240 169 42.0 5e-42 MRINKYIAKAGLASRRKSEEYIKKGLVFVNGKKLDDLSYQVKENDEVKVMGKLLEIKEKF YYKLNKPIGFISSNYDPHNKKDLNSLVKIDQRFFCAGRLDKDSHGLMLITNDGKITNKLI HPSKKIEKTYIVKVDKLLNKDDEALFRKGIKLSDNEKTSDAKINLIDENRKIYEVIIHQG FNRQVRRMFLYFGSKVIDLKRIKIGQIELGKLEDGKYKKLNKKELEYLESL >gi|325481212|gb|AEXN01000011.1| GENE 305 279587 - 280126 610 179 aa, chain - ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 7 177 21 190 202 121 41.0 9e-28 MNRYYLKGIIEEILYIWGDPIDIDDLSKIIFDAEKSEIRNALDEIMAERNEKSSGLLIKK YENKYQFTTRAEHEKYISNIVKKSDKKLSNSSLETLSIIAYKQPITRAEIDKIRGVKSQS TIDNLLDKKLIKENGRLDKIGKPIIYATTDLFLKYFNISTLDDLPKIDQEVLGEFDENQ >gi|325481212|gb|AEXN01000011.1| GENE 306 280201 - 280833 572 210 aa, chain - ## HITS:1 COG:lin2065 KEGG:ns NR:ns ## COG: lin2065 COG1354 # Protein_GI_number: 16801131 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 6 189 4 198 249 79 31.0 5e-15 MKNNSLNIDLEVYTGPFDVLLKLIEKQKVDIYDIKIEDITSPYMEAIKEMDIPLGQLSEF IYISSILLYIKSSKLMPKEKDDTIEEDFISYLIEYKKIKSVEDDLKFLEEESKKFYTKYQ EDLSQYKNEDEIISKDVNILKNEFTKLIKAYKNEKIEKPDLIKTIKRLDVNDYIKKIRNT LKFSTSIRLNSIIDEIKSKASCIGTFFGSS >gi|325481212|gb|AEXN01000011.1| GENE 307 280823 - 281362 676 179 aa, chain - ## HITS:1 COG:SA1330 KEGG:ns NR:ns ## COG: SA1330 COG0494 # Protein_GI_number: 15927080 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Staphylococcus aureus N315 # 1 169 1 169 180 132 44.0 3e-31 MDNYEKTIKVDNIYEGKILSLRVETVEMPDKKYSKREIVDHMKGVGIIAFDGEDSIYLVR QYRKAVDEFTLEIPAGLVEANEKPIETAKRELQEEIGFKPVDIEYLFDMHASPGFTNDKL SFFLAKNLEESKLEEDEDEFLESKSYKVDDVYNMVINGEITDAKTIIAVLYAKRLIDEK >gi|325481212|gb|AEXN01000011.1| GENE 308 281364 - 283055 1647 563 aa, chain - ## HITS:1 COG:BH2776 KEGG:ns NR:ns ## COG: BH2776 COG0497 # Protein_GI_number: 15615339 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Bacillus halodurans # 1 560 1 562 565 292 32.0 1e-78 MLAELFINNFVIIKRDHLFFDKGFNVFTGETGSGKSLILDAINIVLGKRANKDVIGKFDD KTIIEAVFILDDQTLKKLENKDIIFDDNKLIITRTISQQSSSIRLNNRAVNLSMVKEIAT LLIDIYKQGDSNIFMDKDNYLNIIDSYQKNDQSIFLKEEIKSLYNKKNQLLKKFDEFNLS QEEVLREKELINYQLDDIEQIDLENIDEEAIYQEYKKLNSVTELRESIEKSEELISSFDY DQATISSLLAGLSSNLSEFSSIDKEIEDVNEKINTVIDLVNEIYSDLDGFKDSLDQNPER LYELEMINQKIFDLKRKYGNEIEDILKYHQKISLRLKELEKISDFKKNINKNIEKIDSKL EEYSKKLSSIRKEKSINLEKEIKKEIQSLNIKNGDFKVVFMEKTNIDSNGIDNIDFLIKT NKGEDLKSLSSTASGGEISRIVLSFKKIFADYDKIDTMIFDEIDQGISGRTAQIVGEKIL DLSKKRQIIAISHLPQIASLSTNHILIEKYDQDDLTISNSKNIKDIERTKEIARLLAGVD ITEKTIESAKEMLDMAENLRRGN >gi|325481212|gb|AEXN01000011.1| GENE 309 283056 - 283508 591 150 aa, chain - ## HITS:1 COG:CAC2074 KEGG:ns NR:ns ## COG: CAC2074 COG1438 # Protein_GI_number: 15895344 # Func_class: K Transcription # Function: Arginine repressor # Organism: Clostridium acetobutylicum # 3 149 2 148 150 89 36.0 2e-18 MKKYTRQRLILDIIQNNEVKTQSQLSRLLRDQGVDATQATISRDIKELRISKVQTDDYEY KYTVIDTVYDSLNERMEKIFKESVLSVERSYQLVVIKTISYTATVCGLFITNAKLENIGG IVTGLDTIFITPKNLDDIDDLIETLRSMVK >gi|325481212|gb|AEXN01000011.1| GENE 310 283505 - 284344 874 279 aa, chain - ## HITS:1 COG:FN1327 KEGG:ns NR:ns ## COG: FN1327 COG0142 # Protein_GI_number: 19704662 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 43 279 42 297 297 145 38.0 6e-35 MTNMNKKEFDRILNTDKKIIDQAMKEKFVGDNPLNEALVYASDSGKRIRPIVFLETCRML LGDKLDKNIIDCALSLEMVHAYSLVHDDMPCMDNDDYRRGKFTVHKKFGEDQAILVGDSL LSFAFENILNLSIEDQRFLKPARYLARACGKDGMIKGQIFDIKANKNENLSYILDVYKNK TSRLFMAALMMAGLYCQLDDEKLEKLENYAYYLGMAFQLQDDILDKYDEIELNILSCLSM DEAKKLLLDFNEKAKENIKDFDNNDFHIYLIDYLTERIK >gi|325481212|gb|AEXN01000011.1| GENE 311 284337 - 284519 259 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846495|ref|ZP_08169410.1| ## NR: gi|325846495|ref|ZP_08169410.1| hypothetical protein HMPREF9246_0748 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0748 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 66 100.0 6e-10 MDNSFEDNYKKMESLLEDLEKNKDNLDKSLEIYKEAKEIYNTLNEKINDYKAKVEVINND >gi|325481212|gb|AEXN01000011.1| GENE 312 284512 - 285693 1121 393 aa, chain - ## HITS:1 COG:TM1768 KEGG:ns NR:ns ## COG: TM1768 COG1570 # Protein_GI_number: 15644513 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Thermotoga maritima # 3 390 5 392 394 188 31.0 1e-47 MKSLSVKQFNQYIKTSLKLDPLFQNVSIKGEIANYKISHNHIYFSLKEDEEVIDCAIYYY EDKDLGDFNNGDEVIVEGNLIYNSFFSKISIAVNNIEKKGLSEDYIKFLKLKEDFYKKGY FDHERKKSISSYPKNIGLITSDKSAAIVDFISVINKEISDINIYLYPVKVQGLSAKSEII NAIDILDEKKLDAIVITRGGGSKEDLKVFNEKDLVEKIYKAKSPIISAIGHKIDLSLTDL VSDVSLQTPTEAGSYLVRNYKKIRDKINDLFINIKKTLNRNIDLKELKLRNLGDKLELYK IENLLEKKSNDLDLLFDKFNKTIENDIRQKENKISILKYRLNSINSILEIKKKSIYIKDL DDKLIYSRNSLKNKDKVKIVFSDGEVKAEIYDG >gi|325481212|gb|AEXN01000011.1| GENE 313 285694 - 286083 319 129 aa, chain - ## HITS:1 COG:sll0271 KEGG:ns NR:ns ## COG: sll0271 COG0781 # Protein_GI_number: 16331086 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Synechocystis # 69 127 204 262 275 70 52.0 6e-13 MNRAKQRDWVFKIIFENQIKNIDDIDQAIINHDLDLKRDSFLFQSLKSYIDNFKNIEDIL INQIGLSSLKRLAKVDRAILFLSVNEMKYLDIPVSVSINEAVNISKKYSTSDGYKFINSV LGKIAEKSN >gi|325481212|gb|AEXN01000011.1| GENE 314 286083 - 286397 473 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696077|ref|ZP_03304205.1| ## NR: gi|212696077|ref|ZP_03304205.1| hypothetical protein ANHYDRO_00613 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0751 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00613 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0751 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 104 1 104 104 136 100.0 4e-31 MTRAFKYGSVKIANETIEAIAKKACEEINGVVESNTKSNKEAKKDTKISVVNGFVIIDLN LVLSADVNVRKTIKNVQENVKRQVETMTGLSVKRVNVEVNSLVI >gi|325481212|gb|AEXN01000011.1| GENE 315 286408 - 286965 866 185 aa, chain - ## HITS:1 COG:CAC2094 KEGG:ns NR:ns ## COG: CAC2094 COG0231 # Protein_GI_number: 15895364 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Clostridium acetobutylicum # 1 185 1 185 186 230 62.0 9e-61 MISANDLRKGITFEYDGDVYQVIDFQHVKPGKGAAFVRAKIKSVMQGGNKDVTFNPNEKF EQAIISTKEMQYLYNDGQLYYFMDPETFEQIPVDKDAVAEAIPYIKENDTATMRFYKNNP FSIEAPNFVELEVVKTEPAIKGDTATNVTKPAEVETGAVINVPVFVNEGDVIKIDTRKGE YLSRV >gi|325481212|gb|AEXN01000011.1| GENE 316 287105 - 287587 214 160 aa, chain + ## HITS:1 COG:lin2155 KEGG:ns NR:ns ## COG: lin2155 COG1323 # Protein_GI_number: 16801221 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Listeria innocua # 1 135 1 143 391 115 44.0 3e-26 MKKLAIISEYNPFHNGHNFIQKKAKEITKANLVIAIMSGDFVQRGEPSLIDKYKRADSAM ISADLIIEMPSFISLQSANLFARKNIEILNKLKIDYLAFGIENISEEDFFKSVENILNNN ENIDKKQNIFWIRAYHFPRHPMRLQKHMPLMKIFFLPIIF >gi|325481212|gb|AEXN01000011.1| GENE 317 287494 - 288282 658 262 aa, chain + ## HITS:1 COG:FN0732 KEGG:ns NR:ns ## COG: FN0732 COG1323 # Protein_GI_number: 19704067 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Fusobacterium nucleatum # 11 203 137 336 396 82 33.0 1e-15 MDKGLSFSKASYEASKTYALNEDFFSANNILALEYIRAIKNSNSKIKAIPIKRIKSMNKD KNLDKKTFASSTAIRNNINNSNIKSYLPESSLENIEKFKNQYNNFPDMEKLYELFRYKIL IENINMSNILCYEEGMDNYLKKLAEKNFLYNDFINEASSLRFTKSRIKRLMINYLLENTI DLNNIEINFIKVLAFNEKSTRFFKDQAVSILIQKKDEKKLKDNEKIIYDQMIKASNLYSF LINRNMNSDFTQKITIKNSSNK >gi|325481212|gb|AEXN01000011.1| GENE 318 288292 - 288774 694 160 aa, chain - ## HITS:1 COG:Cgl2024 KEGG:ns NR:ns ## COG: Cgl2024 COG3599 # Protein_GI_number: 19553274 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division initiation protein # Organism: Corynebacterium glutamicum # 1 144 1 149 263 64 27.0 8e-11 MANINELIDEIEDIMDNASSVPFSRKVSVDPDEIFEIIREMRDSLPTEIKNAQWINDEKD RILQEAENEARSKVDNANNEIKNFKEQAKSQYQRMISEHQITAEARQEAQRILEEANQQA NSIKQQSYQYVDQLFSKSCDNFNQLAQSLEKNRKHILNQK >gi|325481212|gb|AEXN01000011.1| GENE 319 288774 - 289265 361 163 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 4 157 7 158 164 143 44 7e-33 MKVIYPGSFDPITIGHLDIIKRLDQMFDEVVVAILINEAKHSLFPIKERKQLIEEEIKEN KLKNVKVKTFEGLLVDFAKKENSKTIVRGIRAVTDYEYEINIAQFNANLYPGLETIFLLS DPKFSFISSSGIRELASFSGDVSKFVSKNVKKAIYEKNKLGGK >gi|325481212|gb|AEXN01000011.1| GENE 320 289243 - 289806 282 187 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 179 12 192 199 113 34 1e-23 LMRVVAGKYKGFNLKSPKANNSRPTDNKVKEAVLAMLYPYKNDFTALDLFACTGQMGIEF LSHGAREVVFGELNNSNYKILKENIEKIACKNAYVIRGDFRKVLEILHKENKTFDYIYLD PPYKEDYLKISVETLLDYHLINNNGIIISESDRNIDFSYIENLQLIKEKKYGRKIVKVYC YESDISR >gi|325481212|gb|AEXN01000011.1| GENE 321 289803 - 291782 1530 659 aa, chain - ## HITS:1 COG:SA1070 KEGG:ns NR:ns ## COG: SA1070 COG1200 # Protein_GI_number: 15926810 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Staphylococcus aureus N315 # 3 621 13 644 686 377 38.0 1e-104 MDLLDLKGLGKKKKEYLEKLSIYKVEDLYNYYPREYEDRSKKYDLSHGLDGNKHYFEWKI ESKVYTNYSKKFSISYLYGSENDKRIKIVYFNDKFSPRKLKLGQSYKFYTKIVKNGYEYE CHNPEFTDIDDGRIGNIVPIYPLTKSITNKNLSDFIDQALNFFDQNEILLDKDILDKFSF SDKLSNLKEIHFPTSLDRLKKAKSEIKIIDFLKELIFIYVMQKENSYQDLNLKFDLDKIL NSLDFKLTKSQYNSLVEILNDCTSSNIMNRLLCGDVGSGKTIIALIAMIIFSLNSYQSCM MVPTEVLAIQQFEKNKNLIESFGLRVELLTSSTKNKDSVKEKIKNGQIDIVIGTHALIVD DVEFKNLKLIVADEQHRFGVRQRQALYEKGNKANYLTMTATPIPRTLFLKMKNLLSLSQI TELPKGRGQVITELVLMSMEDSLFSKISNFLNQGRQVYVVSDSINSEDENSVENLYKRYK TKFTDKRIEKLHGKLKADEKENILKEFSDGKIDVLISTTVIEVGIDVSNANCMVIYNANN FGLSSLHQLRGRIGRGEHESFCYLVSKKIDQRSKLNIIKNSNDGFEIAKKDLKLRGAGKI LSTIQHGRNLDEINYFNLKEDEIDLCFKIFTYLKEIKFEGVNFSYLEKYFNIDKRIVLN >gi|325481212|gb|AEXN01000011.1| GENE 322 291788 - 293359 1821 523 aa, chain - ## HITS:1 COG:lin1928 KEGG:ns NR:ns ## COG: lin1928 COG1461 # Protein_GI_number: 16800994 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Listeria innocua # 3 523 5 552 552 358 39.0 1e-98 MKKIDSNKFKSLIIKAFELLNEKRDVVDSLNVFPVPDGDTGTNMTMTMKSGVEKVKQTES ESCYDIAKALSQGTLMGARGNSGVILSQLCRGMSKALKGKDIIDANVIKDIFVTANKTAY RAVMKPTEGTILTVSRLMAEEAENSFEDNIDIDKYLYKIIGAGHKALLDTPNLLPVLKEA KVVDSGGQGLMFLLEGALKALNGEISIETDLSEIEIEDLPSKDFNVDLTISVDEDKKDDL IEKINQSSTSLTEDFDNGILKLSFDCDDIKDLMDIVIDFGQVLSMNVENTNPEVLNDIKL NRKPSKKYGFIAVSRGDGYDKVFESLNVDKIISGGQTMNPSTEDIYKAIEKVDSENVIIF PNNKNIIMSAKQACDLSDRTCRVVETRSIPESFSALLSFDEDESLEENMENFNDAIEDVR VLEVTIAVRDTNVNNVEIKKDEFIGIVDNKIVTSKNTIERTAKETLKNAVDEDTSLITIY YGEDVEDKEAKKLQKYAQKKFKDSDVELIYGGQPLYYYTITLE >gi|325481212|gb|AEXN01000011.1| GENE 323 293367 - 293720 480 117 aa, chain - ## HITS:1 COG:SA1068 KEGG:ns NR:ns ## COG: SA1068 COG1302 # Protein_GI_number: 15926808 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 116 1 116 124 84 46.0 5e-17 MAIKYKNNYGKISISETVIANIAASSVMESYGVVGLASRSTKDGLYKLLGIENMNRGVKV VRNIDGSVSIDISLFLNYGVRIAVVCQNIIENVKYNVEHSLNVGVSNVNILVQGIRS >gi|325481212|gb|AEXN01000011.1| GENE 324 293884 - 297414 4578 1176 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 5 410 2 409 413 546 65.0 1e-155 MTIKRAMKTMDGNTAAAHVSYAFTDVATIYPITPSSPMPEAVDVWAANGRKNIFGRPVEV KEMQSEAGAAGAVHGALAAGALTTTYTASQGLLLMIPNMYKIAGERLPGVFHVAARTLAT HALSIYGDHSDVMAARQTGFAMLCSGSVQQVMDLSPVAHLAAIEGRIPFCNFFDGFRTSH EIQKIQVWDYDDLAPLVDMEAVDRFKNESLNPERPKTIGTSEKNIFFQRMEASNPAYTDI IGITENYMNKINELIGTNYGLFNYYGADDAEEIIIAMGSVCQAAEEAIDKLVEDGKKVGM VEVHLYRPFSKEHLLKAIPKTVKKIAVLDRTKEKGSIGEPLLLDVKSAYYDVEDKPQIIG GRYGLSSKDTIPADIEAVYKNLEGEMKDDFTISIVDDVTHKSLDRTDLRIRQEGTSRCKF WGFGSDGTVGANKQAIKIIGDNTDMYAQGYFDYDSKKSGGLTVSHLRFGKNPIRSTYLLD EADFISCSKPAYVNQYDLLDGLKDGGRFLLNCPWSEEDLEEHLPAKMKRYIAEHNIDFNI IDASHIAENIGLGSRTNMIMQSAFFNLANVIPIDEAVKYLKDSIVKSYGHKGDDIVNMNY KAVDQGIDAVVKVNVPESWKDAKDEVKEEKELPDFIKNIVRPMIEQKEDELPVSAFKDST NGDFEPGTTKYEKRGIALNVPEWQIDNCIQCNQCSYVCPHAVIRPFLVTEDEKSNAPEGF ETKKAIGKGMDGYDFRIQISPLDCTGCGNCADVCPAPKKALLMKPFEEEVEKEKDNWDYA NDVVGYKEDVMDPMTLKGSQFKQPLLEFSGACAGCGETPYAKLVTQLFGDRMYIANATGC SSIWGASSPATPYTTNACGQGPAWGNSLFEDAAEYGYGMKLAADSNKLLLETYMNEFNEL GSDSELSEAFKAWLEGKEDVKASKEATAKILNLEEKAKSVSDEKAKDLLHKIYALKDYMI KKSVWIFGGDGWSYDIGFGGVDHVLASGENINILVFDTEVYSNTGGQSSKATPLSAVAQF AASGKKVRKKDLGLMMTSYGYVYVAQVAMGANQNQTIKAMKEAESYDGPSLIICYAPCIN HGIRIGMGKSQFREKQAVDAGYWHLWRFDPRLAEDGKNPFQLDSREPKESFQEFIQGEVR YSSLKRSFPETADQLYQEAEKAAKDRYETYKRLAGK >gi|325481212|gb|AEXN01000011.1| GENE 325 297519 - 298451 1081 310 aa, chain - ## HITS:1 COG:lin2626 KEGG:ns NR:ns ## COG: lin2626 COG1493 # Protein_GI_number: 16801688 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Listeria innocua # 4 302 2 300 312 261 46.0 2e-69 MGKTTSVKLKDVVDRLALEIVHKSTDYDEVTIQSPDINRPGLQLTGYLEEFPYKRLQIIG SVEYTYLTSLDNRMQYERFRGILSYKMPAIIFSYNAGLPKDILDLADYYDITILRSKLPT TKLTSIISEELEYIFADRTQMHGELLEVFGVGVLILGESSVGKSETALDLVNRGHRLVAD DVVELASYDNKVAGQAPENIRHYTEIRGLGIVDVRRLYGTGSVKVSTDVDLVIELEHWRE DYEYDRLGLDDHYTEILNVEIPKILIPVRAGRNLAMIIEVAAMNQREKSMGYNAAKVMTE NLFKESGNDN >gi|325481212|gb|AEXN01000011.1| GENE 326 298462 - 300309 1757 615 aa, chain - ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 8 612 7 618 623 496 46.0 1e-140 MNNQIKEKLKELPDLPGVYIMRNSQDEIIYVGKAINLKKRVSQYFDNNQNKGRKVLAMVS HINKFEYIIVENEVEALVLESNLIKKNRPKYNIVLRDDKQYPYIKITKEKYPRIQKVRNV KKDKGYYFGPYPDAYAVNDVIELFHNLYPFRTCNLNFDKGQKLDRPCLNYYIHRCKGPCV GRENEKKYMENMAKVKDFLENKSNEIPNLVIKKMNKASQILDFENAAKYRDYHMALSTIS QKQKVTTTNGDDIDIIAMSKGLFYVTMQVFFMRDGKIVDREHFIIKDDYREKESDIMASF MKQFYLNLMYVPKEILVHKLPSELNTLKSFIENKKGGKVTINCPKLGKKKELVDMAFRNA SDMMRKYEKRIEEKERKKHSGLNGLKEILNLKSIGRIEAYDISNTSGVQSVGSMVVFQNG IAERKEYRKFKIKTIEGPDDYHSLEEVLTRRFNRAKKEIKNNNTYTGFGKLPDLILMDGG KGQVKSAKKVLADLNFSIEVAGLVKDDKHTTRAIIYENEEIPIKKRDPVYKLIYEIQEEA HRFAINYHRKLMSQTMKKSELDNINGIGKSKKENLLRHFKTINNIKKASLEELMEVELIG KSQALEIIKYFKLNN >gi|325481212|gb|AEXN01000011.1| GENE 327 300309 - 302078 2130 589 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 589 1 584 584 439 41.0 1e-123 MNIDQKLEKLRELMADRKIDAYIINTSDPHQSEYISDYYKTREFISGFTGSAGVCVVTKD KARLWTDSRYFLQAENELKFSEFEFYRQGFEEDPTMEEFLLEEVGEFGKIGFDGSCYSVK DYKSLSENMASRALVYDIDYISQIWDDRPSLPKEKVWVYDLKYVGESLESKINRLREELK KKDCDYNFIGSPEDICYLLNIRGNDVAYNPVVLSYLLVSMDEIHLCIDQDKLDDDVKNYL KDNKVKLHSYDYIYTLLKNIKGKNRIYIDPERTNVAIFDSINPNVRITSGINISTQMKAI KNDVELENEKKAYIIDGVNLVKFFNWVEVGTSTGSLTELIASKKLHDIRSENESYIEDSF ETIAGYKENGAIVHYEPTSLSSKTLEERSLLLVDSGAHYKEGTTDITRTVALGKLTEEEK ENYTLVLKSHIALMSARFKEKTKGQRLDAIAKYPLWKAGKDFFHGTGHGVGFCLTVHEGP NNISQFNEVELLENMTTSIEPGLYIKDKHGVRIESEVYVKKDIENEFGKFMKFECLTYVP LDTRPIDISMLDKWEIEWINDYNKKCQEILSPYLEGSDLEYLIESCKEI >gi|325481212|gb|AEXN01000011.1| GENE 328 302207 - 303304 1482 365 aa, chain + ## HITS:1 COG:CAC2134 KEGG:ns NR:ns ## COG: CAC2134 COG0012 # Protein_GI_number: 15895403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Clostridium acetobutylicum # 1 365 1 365 365 409 60.0 1e-114 MKLGIVGLPNVGKSTLFNAITKAGAEIANYPFCTIDPNVGLVNVPDSRVDYLAKMHNSKK VVPAAIEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFNDPNVTHVDGKIDPL RDIETINFELILSDLELVEKVLVKREKVAKSDKSARSEVELLKRIKEVLEEGKSARVLNL NDDEKALLKSYQLLSTKPIIYVCNVDESDVANNGDDNEFVQKVREFAKDENAQVSVVSAK IEQEISELESDEEKKEFLEMIGLEESGCDQVIRDSYKTLNLISFLTTGEDETRAWTITNG TKAVDAAGKIHTDIQRGFIKAEIVSFDTLKEYGNMTKVKEHGQLRMEGKDYVMKDGDITN FKFNV >gi|325481212|gb|AEXN01000011.1| GENE 329 303312 - 303917 630 201 aa, chain + ## HITS:1 COG:SA1921 KEGG:ns NR:ns ## COG: SA1921 COG1435 # Protein_GI_number: 15927693 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Staphylococcus aureus N315 # 11 180 14 185 199 127 40.0 2e-29 MKKNAKLIVHTGSMFSGKTTSLWRELYRMKIAGYKTVAFKPSVDSRHEDEKIVSHDNLEL DAIKINSIKDIFEYSKNNQIDAIGIDEVQFFPDDPSEIVDYFIKLMNSHITIVVSGLDMD YKARPFEIVKELMPIADELIKHHAICASCGEDAWVSFRKSYNEDRIEIGAQDSYQPLCRS CYNRKMKEREKTKNQISIDQI >gi|325481212|gb|AEXN01000011.1| GENE 330 304238 - 305419 1908 393 aa, chain - ## HITS:1 COG:CAC2873 KEGG:ns NR:ns ## COG: CAC2873 COG0183 # Protein_GI_number: 15896127 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Clostridium acetobutylicum # 3 393 2 391 392 493 67.0 1e-139 MTRKVVIASAARTPVGSFGGALKSQSAADLGIVAAKAAIERAGIKPEDIDETVLGCVLQA GLGQNVARQISLGAGIPETTPAMTINKVCGSGLRTVSLAAQMILAGDVDVVLAGGAESMS NAPFLLNEARWGARMGNKKLVDEMITDGLWDVYNDYHMGVTAENVAEKYGITREMQDDLA AVSQQRASKARAEGRFKDEIAPVEIKDRKGNVTVVEDDEYIRDGVTQEGISKLRPAFIKD GTVTAANASGINDGAACLIVMSEEKAKELGVKPLATIVSYASAGVDPKVMGTGPIPSSKK ALEKAGWKVEDLDLVESNEAFAAQSYAVRNEMGFDPEKTNVNGGAIAIGHPIGGSGARIL TTLLYEMEKRDSKKGLATLCIGGGMGTALVVER >gi|325481212|gb|AEXN01000011.1| GENE 331 305629 - 306933 1089 434 aa, chain - ## HITS:1 COG:FN1059 KEGG:ns NR:ns ## COG: FN1059 COG1114 # Protein_GI_number: 19704394 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Fusobacterium nucleatum # 2 377 6 382 425 183 37.0 5e-46 MDILVIGFALFAMFFGAGNLIFPPMLGYIYGDKWLLASIAFTIVGVGLTLLAVVSMAKSH GNIFSFTSLAGSKLSKTIILIIALCIGPLGAIPRTAATSFEMVESAGFNINIFVFTLIFF SFSLFLALAKNSVVDFIGKFLTPLLLLSLLIMIIVGMVNPIGQINKIDLNLSKIFSDSML EGYNTMDALAALAFTPIIVESVIKKGYKNNLLIKTIQASLIAVIGLAFVYISLTFLGASA SKSIDTDSRVILLNFISEEILGSKGKFVLLVAIIMACFTTSIGLISSISKIFVEFSNNRF DYKLVAFTIAIVSLLLSILGVESIVRLTGPFLQFVYPLAIMLVIFNLIGKDKLNKRIIKN SFIVVSLVSFMDALVSLIDILSDMFNINLSFSMEIELILKNIIKIISLNIVDFPWVFPVI LTIILTSIYLKFKK >gi|325481212|gb|AEXN01000011.1| GENE 332 307196 - 307996 1034 266 aa, chain - ## HITS:1 COG:lin1821 KEGG:ns NR:ns ## COG: lin1821 COG0024 # Protein_GI_number: 16800888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Listeria innocua # 1 249 1 248 252 289 52.0 5e-78 MIRLYTQKDIEKMYGASEILCQTHLAIREIIRPGITTKFLDEFANKFIKHKKARPAQLGY QGFPYTLCISVNDEICHGFPSDYVLKEGDVVSIDNVIDYKGGLADSCWTYKIGKLSEENE KLVDVNLKALYKGIEAAKPGNRIGDIGHAIQEYVEGENGFSVIRDFIGHGIGKEMHEDPQ VPHYGRKGFGPRIEENMVFTIEPMIAVGDWKSKMDANGWTARTKDGSVCSQFEHQLVIRK DGAEIITDQNNFSLTEDDKKFIEEYK >gi|325481212|gb|AEXN01000011.1| GENE 333 308012 - 308809 968 265 aa, chain - ## HITS:1 COG:no KEGG:Apre_1049 NR:ns ## KEGG: Apre_1049 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 265 1 265 265 242 45.0 1e-62 MLTTNFLKTRTSTRDFKDQDVDDEKIKNIYQIISELENKFGEKDLHYQVNKKCEEVYYKL KGNAGYKGVMIKAPLYIGLDITNNNESALVKGSYGLEELITKIHELGLRSCYITVSGVSD DILKSAFTNSQGKIMSILAIGEAVNEEVREHRFDDRKGINEFVFIDNLDHKASVDELSQR GLDDLFAYLRFAPSSYNSQPWRFVLKDNLVNLYLEDYKDEANFVDAGIVMYYFDQLTKEL SINSQWKVDPKAYGSKFKFIAQKEL >gi|325481212|gb|AEXN01000011.1| GENE 334 308917 - 310719 1217 600 aa, chain + ## HITS:1 COG:BS_yjcD KEGG:ns NR:ns ## COG: BS_yjcD COG0210 # Protein_GI_number: 16078247 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus subtilis # 3 588 136 745 759 204 27.0 6e-52 MKFTSKQLQAANHKDGPLLVLAIPGSGKTTLLLERIRILSKEIDQRKILNLTFSRIQAND MKKRFASDKTNFMTIHAFCYLIIRNFLKKYNRELNLIEDEKIYNKYNLVSEIYKDLNKKK ISKEDLNLFFQKISFMKNSLLDTSYLDKVEISKVKEIYQTYERIKKEKHLLDFDDMQVYA LKLLDDQSLLRSIKNKYKYFQLDEGQDTSLLQFKILEKIVYPENNLLVVADDDQSIYSFR AADPKYLLNFKEVYKNAKIISLDTNHRSGKKIISLASSFITQNKNRYKKTYKVSRDFDDK IEIKEFKNFTKQYDYIIENLDNKKTGILFRNNISAISLSSYLLNKNIDFSINSYILDFFK SKIFTDIVSIITFSEDFDNVEIFSDIYYKISTYLSKDDIESLSHKAINENIFDFYENSDI EDYKKDALFNIEKKFKHIRKLKIEKKISFIYKSLSYDSYINMKSRKYMEETVNKDIYIES LSYFSKSCESLGELYDKINILEKKSKSLVKTNLSLSTIHSSKGLEYDKVFIIDLIKNEFP LIMDEENYFERLEEERRIFYVGLTRARDDLHILTLKNRNNKKVYPSKFYTTSLDIVKNKP >gi|325481212|gb|AEXN01000011.1| GENE 335 310737 - 311879 1088 380 aa, chain - ## HITS:1 COG:CAC1651 KEGG:ns NR:ns ## COG: CAC1651 COG1160 # Protein_GI_number: 15894928 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Clostridium acetobutylicum # 7 377 11 393 411 239 40.0 5e-63 MIAYNSERISLALLGKTNSGKSSFLNFISDQDVSIVSNQKGTTTDPIKKSMEIHDFGPVL FFDTAGFDDDTNLYEKRIEKTKKAIEKADILLYFLSIDDKIEEISVLKEKYDKIIFIATK QDLEIGKDLLEKFKDFSPLAINIKNNHDREKFFDKIKSAYKIEDNSITKSLVKENDLVLL VIPQDAEAPKYRLIKPQVMTIREIIDKNASAVSTNLKNLENTLNSFNKKPDLVITDSQYF KEVYNILDKDIRLTSFSVLFSAFKADINYYIESVKKLDQGAKKILIAEACSHPPISEDIG TVKIPKLLKKRYKDIEIYFQRGEDFENIEKYDLIIQCGACMFNKKYVMERIKQAKEKNIP MTNYGIVIAYLNGILDKISI >gi|325481212|gb|AEXN01000011.1| GENE 336 311876 - 313300 1744 474 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 4 471 2 469 472 662 70.0 0 MAKYDVKSKNAEEFINHEEILESLDYGREHKNDRKLIKEILEKAKKAQGLSHRDAFVLLS CQEEDLNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCPYHAKNKTIPRRKLS QDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIKHKNGSIRRVNVNIA ATSEENYKKLLDAEIGTYILFQETYNKKNYELLHPTGPKHDYDYHTESMDRAMSAGINDV GCGVLFGLQSYEYEFVGLLMHAEHLEARFNCGPHTISVPRVQPADDIDPNEFDNSLSDEM FEKIVACLRLAVPYTGMIISTRESKKVREKVLDLGISQISGGSKTTVGGYSEDIGDVEGS NQFELADNRTLDEVVDWLLNMNYLPSFCTACYREGRVGKDFMKIVKDHGIGNMCQPNAIL TLDEYLTDYASDKTRKDGRALINREIEKIQNPDLRANTKKWLDEIRDGKRDIHV >gi|325481212|gb|AEXN01000011.1| GENE 337 313484 - 314083 514 199 aa, chain - ## HITS:1 COG:slr1426 KEGG:ns NR:ns ## COG: slr1426 COG0353 # Protein_GI_number: 16332099 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Synechocystis # 3 199 37 232 232 203 47.0 2e-52 MALYPESLIKLIEQFQKLPTIGKKSAERLAMSIVGKDDESVEDFSKALLEVKSKIHPCKI CGNLTEDEICGICKDVSREENIICVIEDVRNLYAIEKSSVFHGKYHILGGLISPSDNVKA EDLSIDKLLDRIDKENIKEVILAISSTIEGETTSLFLAHLLENKNVKVSKIASGIPVGSN LEYFDQLTLERALEDRREI >gi|325481212|gb|AEXN01000011.1| GENE 338 314083 - 314418 194 111 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 10 108 9 107 114 79 36 2e-13 MARGGFPGGGNMNNMMKKVKKMQEDMAKAQQEIEEKEFSSTAGGGVIEAVVNGKKEVIKI KIDEDVVDPEDTEMLEDLVVAAVNDALKKADQYTQKEMGKLTGNINIPGLM >gi|325481212|gb|AEXN01000011.1| GENE 339 314430 - 316172 1907 580 aa, chain - ## HITS:1 COG:lin2852 KEGG:ns NR:ns ## COG: lin2852 COG2812 # Protein_GI_number: 16801912 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Listeria innocua # 3 355 4 357 579 288 43.0 2e-77 MAKALYREYRPQKFSDVLGQERVVNVLKNQVKSGQISHAYLFAGERGCGKTTCAKIFAKA INCLNPIDSSPCGICENCKSIEEESTMDVVEMDAASNRRIDDIRNLKETVVYPPNNLKYK VYIIDEAHMITREAFNALLKIMEEPPSHLVFILATTEIEKIPKTILSRVQKFEFNKIGRD DIIKQIDIILNDRNISMEDEAKDLIVKKAKGAMRDALSILDQVLSIDKDNFLLQDVENIL GVVDFYSLDKLVDNILSYNQKDSLEILFKLKENGKDDRDILDGLIGYLRDIMVYKTSLNE KYVDNLDYIDLIKEKIEQISSEKIVSYLEILNDYSNRMKVSENSSLLMEMAILRLINLKD EENILSRIEKLERNQANDQLDIINKLVDQKFKNINLDKFLENSKRDFEKKDTYEQKPVEK EVSKRQELDQKTLPEEQAPIKVVENVEEDIEDKNPNESSNNSYIMDKKEEEIFISELLNS SSPILRAQIKAEGFNYDIIGDNFTIYYKNNIYYQFLDETKSKMKEILKSLLGKDFDVKVS SIDKKKSSINNNIRGSKKDSSDDVIEKLVEVFDNDLIIEE >gi|325481212|gb|AEXN01000011.1| GENE 340 316708 - 317175 538 155 aa, chain + ## HITS:1 COG:lin1008 KEGG:ns NR:ns ## COG: lin1008 COG0517 # Protein_GI_number: 16800077 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Listeria innocua # 1 143 1 143 150 76 32.0 2e-14 MIGEKLKNLFNQPTANIITPASDVAVVRENDTLLHAILVLSNRGYQTIPVLDENDRVRGL ISISKIVISSEDVTFFNEEILTQTKVKEVMDQIVPILFDDSDLEDILRLIVNNNFICITH RNGYFVGIITRKTILERFTNIAHNIESEYKLIKKL >gi|325481212|gb|AEXN01000011.1| GENE 341 317195 - 318835 1242 546 aa, chain - ## HITS:1 COG:FN0856 KEGG:ns NR:ns ## COG: FN0856 COG0296 # Protein_GI_number: 19704191 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Fusobacterium nucleatum # 1 534 8 585 611 168 26.0 3e-41 MDTRAFIEGKAKDAYKFFGNHKKTNNSYIFRNYAPNARNVCVIGDFNGWKEEKLRKYSTG VFSKTIKKVNKFDKYLFVIEDNDGNKSYKLDPFAKLCDLENQSSLVFDEAFKFSYKIREN NKINIYQVNFENLDREIFENKKKMDTFIQYLKNNNFTHLNFMPIFSNRIEASLGFAPSSF FALNENFTSVENFKLFIDLCHKNNIGIILDFDIGEFDSFNKGLIKFDGSNLYNYDYDDIL YNYQGSVNIDPKKDIVKSFIFSLISYWIDEYNIDGIKFANLENMVFWQGDKSRGNNEYWL ALLKEINFYIKSLGKISIGSFYYMWKNEFDEDLGFSYIYDRTFSSLIKIMQKYPYQRDNY SNIVENIIRGKYDEYILGFDFSDSLSEGASLCMKMYSNDKKYQQLKTLFLLLYSLSSKKM VFMEDEVGSLKSFNINRKVDFNKINKEEKDFNDFYKDLSKFYQDHKNLYKKDAQTKILEI EGYSLYAFIREYKNEKYLVLINLTNLDYKIDLDFKLEKILTSFDGKYKEDDKIKIPAFGS GIFRIK >gi|325481212|gb|AEXN01000011.1| GENE 342 318994 - 319092 97 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEILDKNENDNTSMQSIYLKVLYAKKITHLIK >gi|325481212|gb|AEXN01000011.1| GENE 343 319218 - 319838 516 206 aa, chain + ## HITS:1 COG:STM4423 KEGG:ns NR:ns ## COG: STM4423 COG2207 # Protein_GI_number: 16767669 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 104 205 161 265 274 79 39.0 4e-15 MGHSIYSKEDDNLNYISFGVDSIFVKTVNNDQDFDEDKYIYKNIDENTDKFINFFKEINI EFNSNDIYSKSMANAKASEFVIQLLRKYKDEFLITNDIKINKQIDYIKNFIDNNYAEDIK LENLSKMAYMNKFHLISEFKQSYRVTPIEYLILKRIEITKNLLISTNHSMEEISSIVGFN SQSYFNQVFKKKVGLTPSQFRKNHRI >gi|325481212|gb|AEXN01000011.1| GENE 344 319905 - 320390 463 161 aa, chain - ## HITS:1 COG:no KEGG:Apre_1138 NR:ns ## KEGG: Apre_1138 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 156 44 198 208 165 57.0 7e-40 MRTTDLKQNYEFLNEFLKHALLIVVGIELIEMILTKSHEAILTLILFVIARKMLLYSVDL VDILIGAISIGLIFAIIKFVVKDEKLMAKIDNTYSASVPVKKIKDEYKLNIPQDMSNTLG GLVYEIAKIEGIDEIKENTRLIYGTYKFKVISMKDGGYSKN >gi|325481212|gb|AEXN01000011.1| GENE 345 320530 - 321801 1140 423 aa, chain - ## HITS:1 COG:FN0456 KEGG:ns NR:ns ## COG: FN0456 COG1306 # Protein_GI_number: 19703791 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 74 419 33 378 380 162 31.0 1e-39 MKNKKLCFLFFLILTITFTSCSLNKDKETSEKDFSSTEKIIYSKNSKKEKKPLGEPYTVG VTPDDYNMDYDTSRLKSLNEKKSKYYPEEGVKGIYLNAYTAANPKAFKKIMNLLDETKLN AVVLDVKDDWGNITCKFDTNNKDIKYATHEILDAEDFINKMHKKGIYVIGRITTFKDSVI TEKHPDWGFKLDDGSLWKNGHGEAFMNPFMDEVRNYDLQIAELAANAGFDEIQFDYIRFA EGFETFHGKLDYPKGRWEKSKMDEGDKRIDAITSFVKEAREILQAYDTPCGIDVFGYSMQ VGRADGIGQDFKEMSNQADVMSSMIYPSHWGLNSFDIEKPDLEPYELVKRYLKEEQKVFS EIEHKPQSRPWIQDFTASWIGAGNYMEYDKEAVEDQIKAIYDSGQKEFLLWNASGDYTRG VNY Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:34:48 2011 Seq name: gi|325481211|gb|AEXN01000012.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00056, whole genome shotgun sequence Length of sequence - 745 bp Number of predicted genes - 2, with homology - 0 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . + CDS 580 - 684 96 ## - TRNA 603 - 678 92.6 # Ala TGC 0 0 Predicted protein(s) >gi|325481211|gb|AEXN01000012.1| GENE 1 380 - 556 186 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYSLSNDCVFHNRVAPFGDLGVSAFCELTLVFVHLRPLSPSCAKASTLCPFFLDWKYL >gi|325481211|gb|AEXN01000012.1| GENE 2 580 - 684 96 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNRMVFLGGDEEIRTLDPLRARQVLSQLSYTPM Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:35:01 2011 Seq name: gi|325481198|gb|AEXN01000013.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00030, whole genome shotgun sequence Length of sequence - 13943 bp Number of predicted genes - 14, with homology - 11 Number of transcription units - 6, operones - 2 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 79 - 603 381 ## COG2314 Predicted membrane protein + Term 604 - 633 -0.2 - Term 1091 - 1125 -1.0 2 2 Op 1 . - CDS 1274 - 1657 485 ## gi|325846836|ref|ZP_08169714.1| hypothetical protein HMPREF9246_1054 - Term 1665 - 1698 4.5 3 2 Op 2 . - CDS 1705 - 1950 379 ## Apre_1084 glutaredoxin 4 2 Op 3 . - CDS 2008 - 2196 221 ## Apre_0020 hypothetical protein 5 2 Op 4 44/0.000 - CDS 2193 - 3809 683 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 6 2 Op 5 44/0.000 - CDS 3796 - 4800 614 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 7 2 Op 6 49/0.000 - CDS 4809 - 6755 2424 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 8 2 Op 7 . - CDS 6757 - 7719 1046 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 7798 - 7857 10.7 - Term 8535 - 8571 3.3 9 3 Tu 1 . - CDS 8581 - 10707 2782 ## Apre_0015 extracellular solute-binding protein family 5 - Prom 10741 - 10800 13.0 10 4 Tu 1 . + CDS 11073 - 12053 1210 ## Apre_0012 hypothetical protein + Term 12062 - 12086 -1.0 + Prom 12212 - 12271 9.5 11 5 Tu 1 . + CDS 12517 - 12660 57 ## + Term 12665 - 12702 1.0 12 6 Op 1 . - CDS 12802 - 12996 113 ## 13 6 Op 2 . - CDS 13024 - 13794 715 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit 14 6 Op 3 . - CDS 13797 - 13931 182 ## Predicted protein(s) >gi|325481198|gb|AEXN01000013.1| GENE 1 79 - 603 381 174 aa, chain + ## HITS:1 COG:SA1057 KEGG:ns NR:ns ## COG: SA1057 COG2314 # Protein_GI_number: 15926797 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 109 172 2 65 67 77 53.0 1e-14 MGEIIKIEIDSIVVGMDDGSVVRVNLSDVNFLPQIGDRVKVFKDEKGNFVKKIKEDELVE NKENILHKEENLFQKEKTSDYNFETNTIDYRNNVTNNYYINTSMQNKKKVNKLSYLLLAF FLGSFGGHKFYSGKIGKGILYLFFSWTFIPTLISFVEFLTALTKPSDENGNIYV >gi|325481198|gb|AEXN01000013.1| GENE 2 1274 - 1657 485 127 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846836|ref|ZP_08169714.1| ## NR: gi|325846836|ref|ZP_08169714.1| hypothetical protein HMPREF9246_1054 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1054 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 127 1 127 127 202 100.0 7e-51 MKKLQYKDGKIFENERMTYKLEGKYNVLRPSGKLVARFKIKNLFSLRGKKQAVIGNLKIE KMKDQSISQAKIINRQVRLIENGENLSLIKEDEFLANFNFEEDTLEIYEDEGLAVAIFFA LKKLGEK >gi|325481198|gb|AEXN01000013.1| GENE 3 1705 - 1950 379 81 aa, chain - ## HITS:1 COG:no KEGG:Apre_1084 NR:ns ## KEGG: Apre_1084 # Name: not_defined # Def: glutaredoxin # Organism: A.prevotii # Pathway: not_defined # 4 81 11 88 103 89 58.0 4e-17 MSKFDLYFKPECPYCLKVLNFMHENKILDFTSYNVKDGRSGKENTKELIELGGKDQIPFM VFGDKKMYESDDIIEYLKENY >gi|325481198|gb|AEXN01000013.1| GENE 4 2008 - 2196 221 62 aa, chain - ## HITS:1 COG:no KEGG:Apre_0020 NR:ns ## KEGG: Apre_0020 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 48 1 48 62 62 75.0 4e-09 MKRPIDPFKNKSKEEIYEKEELLEKDNLEKDDRLAMFLAAMKVFMPPVLLILLLFTSLIF FF >gi|325481198|gb|AEXN01000013.1| GENE 5 2193 - 3809 683 538 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 259 508 82 328 329 267 52 3e-71 MEKNNKKVLFKIRNLKKYFPIKKKSIFSRGANEYVHANENISIDIFEGETFGLVGESGCG KSTFGRTILQIYEQTEGTTLYYGTTLDKLAPAYMGKDIKDIPKVFPSYDAEVEKLHKIYD DLEKTNDEEKKAELNEAAMHQRRLLQEEYENMMRIAGGLLASDNLEEITNILDDYYKKIK ERSKVLLQIKKIKEKDQVRIRDKKELKNAILNDPKYKELLSKKEILDKKVLEKEQKIKAK KEELKSKDLFEKFESFVDDGIDLSRLTNEEMRELRKDLQIIFQDPYGSLDTKMTVGNIIG EGVLGHGLFKSRKEAGYNEYIQDVMNQCGLAPYFIHRYPHQFSGGQRQRIGIARALALNP TFIVCDEAVSALDVSIQSQIINLLQDLKTDLNLTYLFITHDLSVVKYISDRIGVMYLGVM VELSDSDRIFKNPQHPYTKALLQAIPRTDVDKGQELQTIDGDIPSAVRPPKGCRFHTRCK YCMEICKQFEPELKEVEEGHFVACHLMDVSEKTKQEAFEKNEEKRLKEEHQLAKEANL >gi|325481198|gb|AEXN01000013.1| GENE 6 3796 - 4800 614 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 2 321 9 324 329 241 40 3e-63 MKNLLEINKLHTYFKTRRGLIKAVNGVSCTIEEGKTLGLVGESGSGKSQTAMSILQLFEP NQKIYDGEIIFDGKKISDYKRSQMEKIRGNDISMIFQEPMSSLNPVFTVEKQISEVLILH KKMNKKEASKRVEELLAQVKIPNPHVVAKQYPFELSGGMNQRVMIAMALACEPKLLIADE PTTALDVTIQAQILKLMNELKEKQNTSILFITHDLGVINQMADEVAVMYCGQIVEQSPVD YIFKHDITDYNHPYTVALLNSIPAITSDRNERLDIIPGSVPHPLNLPDGCKFADRCKYAT DKCRKEMPELVAVNENQKIRCHFPNRKEREDGEK >gi|325481198|gb|AEXN01000013.1| GENE 7 4809 - 6755 2424 648 aa, chain - ## HITS:1 COG:alr1556 KEGG:ns NR:ns ## COG: alr1556 COG1173 # Protein_GI_number: 17229048 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Nostoc sp. PCC 7120 # 420 648 144 372 372 218 42.0 4e-56 MKDELKKSFKSFGKLVLSLFTFGTNANNESEEDKIKDMAQDLLDEQSGENLEDLRLNENE SLKEDAITSPGKMAVKNYFRNPLGLIGLVLLLGIILVVFIGSAIIPFNPYQAEGNLINVS PGSGYMKYPSQMEKEGVEKISVGNTFGVGLTKEKNYYFWGKNNEDDVMKIPDDIKEELDG KKIKDVAAGDRHIIVATEDNDLYGWGNDSFQQAELPPMQESKIKEEGIKKLGGGVQYSVV LTEKNNIYVWGSTMNSRLDLIPKEVQGKVVDFDTSGSNILAVLKDGSTKLLGVRGAEVDV GAPDEIKNNKVKIKKVALTSNSAAALDENGKLYVWGPSRDNLSGKNVPKFEGKVKDIVGG TNHFTALDENGKLYSWGNNNYGEASCPSGKYEQIFSGYFNNYAVSKDNKIDTWGLKGFRF GSDDQGRDIFTRLIHGGKMTIVISFVSVLIQVVLGVIIGMVSGYAGGRVDNVLMRITEIV QSFPFYPLIITLSALLPVNTSQNTRLMMIMVLLGVIGWTGIARLVRGQILAERERDYVIA ARALGVTNSSILVRHILPNILSIIIVNATLGFAGNLLTEAGLSFLGFGVQEPMPSWGNMM TSAQSSDVINIYWWRWVIPALAVFLAAFSVNLIGDALRDAIDPRSNER >gi|325481198|gb|AEXN01000013.1| GENE 8 6757 - 7719 1046 320 aa, chain - ## HITS:1 COG:CAC0177 KEGG:ns NR:ns ## COG: CAC0177 COG0601 # Protein_GI_number: 15893470 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 319 1 321 322 253 43.0 4e-67 MLKYIIKRIINLIPVAIIISILVFVLSKSMPGDPILAMMPKDGRMTKAQQEQMYKNLEKR YGYDKSLPEQYFMWMGRSLKGDFGESTQVKRPVKEYLSEPLKNTILLNIGSTLVSFVLSV LIGIRSAVHKGGPFDKFFQVFTLVGISLPTFFIGLFLIFLFSFRLGWLPANGMPRNNTFG EWIRYLILPTLTLTFGSMASISRYVRNSMLDSLNEDYIRTARAKGLKEKTVIYSHAFRNA LIPVVTAMTWAILSMFSGSAITETIFAYRGIGNILIKSVLAQDYNVILALTMFYAILTLL GNLIMDIAYALVDPRVKLEA >gi|325481198|gb|AEXN01000013.1| GENE 9 8581 - 10707 2782 708 aa, chain - ## HITS:1 COG:no KEGG:Apre_0015 NR:ns ## KEGG: Apre_0015 # Name: not_defined # Def: extracellular solute-binding protein family 5 # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 1 708 1 727 728 753 55.0 0 MNVKKVFSQAFALGLALTLTACGGSGDKDNNGSNAGADNKASNEQANEEFKKQTDDNTLV VGVDSLGGEFIQGFNNSQNDVRAREFMGIQGSVGYATYVKDRSGKYVINKTVLDGDPKSK ENEDGSKTFTFKIKKDLKWSDGKPVTSDDYLFTALLHSPQDYALITGSTEIGGDSLKGYN DFREGKTDEFEGVKKIDDQTFEITVSNDFLPYFEEESLKSMTPRPIHYIAPNLTVDGSKF ALKDGYKLSDDDKKAFVASLDKQIETEKSSYDEAVKEAGEEDPDAKKEHEEKIKTLEDKK KSAESGKDIDPTEMLVEQAMLFDANEYRKAPKVTCGPYKFVSFKNNMVKMELNDQYAGDF EGHKATIKNVIIQAINPEISVDLVQNGDIDVFEEEMNGSRISQMRKAAKEKKLQYVAFDR NGYGCLSFLTDRGPTQYKEVRQAIAFLMNRDDFVQNYAGGYAVVTNGMYGSSQWMYKERG ADIEGKLTKYTLNVDEANKRLDKSPYKFEKDGKTPWDAKKAADQYKSNADKFDYYRYDEN GKKLQVNQFGAKESEITTLLSNQLPDNAKQAGLEYNVQAGDFNTLLNYRENPKEGDKAEY TAFNMGLGFGTPFDPFYQYNSKGNDNKTKTNDPQADKITEELRRIKPGENKAYLDKWEEF QKWYNDYLPEIPLYSNQIHSSASTRVKGFEGLTPEWATSCQINQMSLK >gi|325481198|gb|AEXN01000013.1| GENE 10 11073 - 12053 1210 326 aa, chain + ## HITS:1 COG:no KEGG:Apre_0012 NR:ns ## KEGG: Apre_0012 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 323 3 315 316 151 36.0 4e-35 MKKKIALALCLSLVLTSCSLKSKNNDKSNSNELKSQSNTQNNLIIGESKDNKSNNLSKSN EKIESPSKTLSIKDIKKAMVDLGGFDQAFTDKLSDKEIKSYQKDADQISKKTGFWNKLTL MFNQIAKENPNTSRFYPDSSIEDIVNNWVYSTDEGLDHYANARVYIGQNDFDASQVPNGE LRKIFNEVYDENKYATYDENIEKASQKLKKKYPNGYEGKENSEKSDTKVEEKDNSQAKTS LDQGNRPVDKFSENKKDYDAFRKELVDQYKFSKKSVEKITNNDIDLAYLRAQKKLEDEGF GDIGLVINEIAKMYPGSSSMYPGNEN >gi|325481198|gb|AEXN01000013.1| GENE 11 12517 - 12660 57 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYVIYKNKFNLNITLIHEISRQRLRWVIFGIYSYAKVVSLISIFYNS >gi|325481198|gb|AEXN01000013.1| GENE 12 12802 - 12996 113 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGKNIKIIINTSNKINIIPKSTKRFLDTKTHLLGKFFHAITLVLGINMPNQGIFIGSKWV SDYT >gi|325481198|gb|AEXN01000013.1| GENE 13 13024 - 13794 715 256 aa, chain - ## HITS:1 COG:BH0529 KEGG:ns NR:ns ## COG: BH0529 COG1191 # Protein_GI_number: 15613092 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 7 248 5 249 261 164 38.0 2e-40 MAKTKASLERKKEIKEKFEQFYKTRDKDLRNELIEDHMYIVDILSNKYVGKGIEKDDLYQ VASLGLIYAIDRYDPSKGYEFSSFATPTIMGELKRYFRDKGWVIRVPRRIQNLYKKINVA KKILPQELQRTPTIKDIAAYLGEDEETILETMEASKVYTPQSLDMKYQVQKGENSVDLSD MIGEDDKNFDSIELKDLIEKSTERLNDLEKQILELRYYEGRTQVDIAKKLSISQMTVSRI EKKILQKFTIEMKKMQ >gi|325481198|gb|AEXN01000013.1| GENE 14 13797 - 13931 182 44 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKVEVIGKDREIEEENLKIKQIILEQLADRVEVVEDKIILTKEK Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:36:13 2011 Seq name: gi|325481101|gb|AEXN01000014.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00028, whole genome shotgun sequence Length of sequence - 87921 bp Number of predicted genes - 100, with homology - 94 Number of transcription units - 39, operones - 21 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 1 Op 2 . - CDS 805 - 3168 2876 ## COG0058 Glucan phosphorylase 3 1 Op 3 . - CDS 3225 - 3845 652 ## Apre_0412 hypothetical protein 4 1 Op 4 . - CDS 3846 - 5042 1251 ## COG0628 Predicted permease + Prom 4936 - 4995 7.1 5 2 Tu 1 . + CDS 5141 - 5764 880 ## COG1564 Thiamine pyrophosphokinase + Term 5971 - 6004 2.0 - Term 6288 - 6318 -0.4 6 3 Op 1 . - CDS 6323 - 6676 437 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Term 6682 - 6714 2.5 7 3 Op 2 . - CDS 6724 - 7176 757 ## COG1302 Uncharacterized protein conserved in bacteria 8 3 Op 3 . - CDS 7196 - 7516 476 ## Apre_1465 hypothetical protein 9 3 Op 4 . - CDS 7525 - 8064 681 ## Apre_1466 hypothetical protein - Prom 8222 - 8281 4.6 10 4 Op 1 . - CDS 8338 - 10038 1728 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 11 4 Op 2 . - CDS 10045 - 10683 809 ## COG2344 AT-rich DNA-binding protein 12 4 Op 3 . - CDS 10698 - 11135 253 ## Apre_1469 hypothetical protein 13 4 Op 4 . - CDS 11144 - 12970 2439 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 13010 - 13069 11.5 - Term 13003 - 13055 -0.3 14 5 Tu 1 . - CDS 13089 - 13487 562 ## Apre_1471 putative signal transduction histidine kinase - Prom 13507 - 13566 10.3 + Prom 13386 - 13445 12.9 15 6 Tu 1 . + CDS 13624 - 13782 431 ## COG1773 Rubredoxin + Term 13794 - 13823 2.1 + Prom 13870 - 13929 11.5 16 7 Tu 1 . + CDS 13968 - 14438 297 ## COG0398 Uncharacterized conserved protein 17 8 Op 1 . - CDS 14469 - 15299 734 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 18 8 Op 2 . - CDS 15313 - 16287 786 ## COG1284 Uncharacterized conserved protein 19 8 Op 3 . - CDS 16344 - 17525 1400 ## Apre_1476 hypothetical protein 20 8 Op 4 . - CDS 17593 - 17967 269 ## Apre_1477 hypothetical protein 21 8 Op 5 . - CDS 17970 - 18707 924 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 22 8 Op 6 . - CDS 18733 - 18897 258 ## gi|212696632|ref|ZP_03304760.1| hypothetical protein ANHYDRO_01172 23 8 Op 7 . - CDS 18905 - 19639 544 ## Apre_1479 hypothetical protein 24 8 Op 8 . - CDS 19648 - 20436 486 ## gi|325846947|ref|ZP_08169804.1| conserved domain protein 25 8 Op 9 . - CDS 20433 - 21131 248 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 26 8 Op 10 . - CDS 21124 - 21474 537 ## Apre_1481 hypothetical protein 27 8 Op 11 . - CDS 21503 - 21757 344 ## gi|325846938|ref|ZP_08169795.1| conserved domain protein 28 8 Op 12 . - CDS 21758 - 22009 259 ## Apre_1483 guanine-specific ribonuclease N1 and T1 29 8 Op 13 . - CDS 22006 - 22206 212 ## gi|212696638|ref|ZP_03304766.1| hypothetical protein ANHYDRO_01178 - Prom 22232 - 22291 7.6 + Prom 22161 - 22220 8.7 30 9 Tu 1 . + CDS 22250 - 22696 580 ## COG1683 Uncharacterized conserved protein + Term 22806 - 22872 30.0 + TRNA 22784 - 22860 84.3 # Pro TGG 0 0 - Term 23068 - 23112 8.4 31 10 Op 1 26/0.000 - CDS 23323 - 24258 1356 ## COG1079 Uncharacterized ABC-type transport system, permease component 32 10 Op 2 24/0.000 - CDS 24251 - 25345 1172 ## COG4603 ABC-type uncharacterized transport system, permease component 33 10 Op 3 15/0.000 - CDS 25338 - 26861 201 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 26894 - 26953 2.9 34 10 Op 4 . - CDS 26961 - 28025 1584 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein - Prom 28045 - 28104 6.4 35 10 Op 5 . - CDS 28113 - 29153 1444 ## COG1363 Cellulase M and related proteins - Prom 29173 - 29232 12.5 + Prom 29126 - 29185 11.6 36 11 Op 1 . + CDS 29242 - 30075 1061 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 37 11 Op 2 . + CDS 30116 - 31591 1914 ## COG0579 Predicted dehydrogenase + Term 31595 - 31632 4.0 - Term 31585 - 31618 2.3 38 12 Tu 1 . - CDS 31623 - 33017 1602 ## gi|325846923|ref|ZP_08169780.1| putative lipoprotein - Prom 33047 - 33106 11.9 - Term 33085 - 33121 3.0 39 13 Op 1 . - CDS 33157 - 34671 2123 ## COG4166 ABC-type oligopeptide transport system, periplasmic component 40 13 Op 2 . - CDS 34662 - 34811 183 ## gi|212696651|ref|ZP_03304779.1| hypothetical protein ANHYDRO_01192 41 13 Op 3 44/0.000 - CDS 34801 - 35796 845 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 42 13 Op 4 44/0.000 - CDS 35786 - 36793 562 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 43 13 Op 5 49/0.000 - CDS 36801 - 37841 1140 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 44 13 Op 6 . - CDS 37844 - 38773 957 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 38902 - 38961 7.4 45 14 Op 1 . + CDS 39110 - 39550 589 ## COG3279 Response regulator of the LytR/AlgR family 46 14 Op 2 . + CDS 39560 - 39985 423 ## Apre_1651 hypothetical protein + Term 40170 - 40208 1.2 - Term 39976 - 40015 4.6 47 15 Op 1 1/0.000 - CDS 40020 - 40700 869 ## COG0176 Transaldolase 48 15 Op 2 5/0.000 - CDS 40719 - 41531 986 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 49 15 Op 3 6/0.000 - CDS 41533 - 41895 503 ## COG3731 Phosphotransferase system sorbitol-specific component IIA 50 15 Op 4 6/0.000 - CDS 41904 - 42902 1316 ## COG3732 Phosphotransferase system sorbitol-specific component IIBC 51 15 Op 5 . - CDS 42895 - 43455 809 ## COG3730 Phosphotransferase system sorbitol-specific component IIC 52 15 Op 6 . - CDS 43479 - 43919 470 ## Cbei_0335 glucitol operon activator 53 15 Op 7 . - CDS 43931 - 45796 1673 ## COG3711 Transcriptional antiterminator - Prom 45833 - 45892 10.5 - Term 45874 - 45913 7.0 54 16 Op 1 4/0.000 - CDS 45926 - 46285 569 ## COG3862 Uncharacterized protein with conserved CXXC pairs 55 16 Op 2 6/0.000 - CDS 46282 - 47541 2047 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 56 16 Op 3 . - CDS 47554 - 48258 834 ## COG0579 Predicted dehydrogenase - Prom 48323 - 48382 1.9 57 17 Tu 1 3/0.000 - CDS 48387 - 48974 699 ## COG0579 Predicted dehydrogenase - Prom 49003 - 49062 4.8 - Term 48994 - 49048 11.9 58 18 Op 1 2/0.000 - CDS 49104 - 50609 1984 ## COG0554 Glycerol kinase 59 18 Op 2 . - CDS 50621 - 51193 573 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) - Prom 51264 - 51323 12.8 - Term 51202 - 51243 3.0 60 19 Op 1 . - CDS 51360 - 51968 708 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 61 19 Op 2 . - CDS 52001 - 52708 864 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 62 19 Op 3 . - CDS 52689 - 53024 343 ## COG1695 Predicted transcriptional regulators 63 19 Op 4 . - CDS 53065 - 55647 2143 ## COG0210 Superfamily I DNA and RNA helicases 64 19 Op 5 . - CDS 55644 - 56147 615 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - Prom 56168 - 56227 4.4 - Term 56180 - 56216 4.4 65 20 Op 1 3/0.000 - CDS 56230 - 57081 1347 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 66 20 Op 2 22/0.000 - CDS 57108 - 57980 1298 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 67 20 Op 3 32/0.000 - CDS 57994 - 58659 900 ## COG2011 ABC-type metal ion transport system, permease component 68 20 Op 4 . - CDS 58646 - 59674 1305 ## COG1135 ABC-type metal ion transport system, ATPase component 69 20 Op 5 . - CDS 59667 - 60806 1562 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 70 20 Op 6 . - CDS 60815 - 60886 135 ## - Term 61338 - 61387 4.0 71 21 Tu 1 . - CDS 61436 - 63256 2511 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 63435 - 63494 11.2 - Term 63518 - 63556 7.0 72 22 Op 1 . - CDS 63589 - 67122 4602 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 67144 - 67203 2.5 73 22 Op 2 . - CDS 67208 - 68431 1539 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 68602 - 68661 9.3 74 23 Op 1 41/0.000 - CDS 68857 - 70473 1597 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 75 23 Op 2 . - CDS 70483 - 70764 535 ## COG0234 Co-chaperonin GroES (HSP10) - Prom 70785 - 70844 2.9 76 24 Op 1 . - CDS 70848 - 71753 969 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 77 24 Op 2 . - CDS 71762 - 72526 761 ## COG4509 Uncharacterized protein conserved in bacteria - Prom 72549 - 72608 8.9 + Prom 72511 - 72570 6.2 78 25 Tu 1 . + CDS 72608 - 72835 309 ## Apre_1387 glutaredoxin + Term 72844 - 72877 2.2 + Prom 72846 - 72905 10.0 79 26 Tu 1 . + CDS 72965 - 73780 1096 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 73785 - 73829 7.1 - Term 73771 - 73815 7.1 80 27 Op 1 . - CDS 73821 - 74054 235 ## gi|325846906|ref|ZP_08169763.1| hypothetical protein HMPREF9246_0970 81 27 Op 2 . - CDS 74066 - 74239 243 ## - Prom 74313 - 74372 8.8 82 28 Tu 1 . - CDS 74374 - 75039 515 ## Apre_1390 aldose 1-epimerase - Prom 75059 - 75118 4.4 - Term 75086 - 75116 2.0 83 29 Op 1 . - CDS 75125 - 75610 853 ## COG1528 Ferritin-like protein 84 29 Op 2 . - CDS 75603 - 75899 455 ## Apre_1392 hypothetical protein 85 29 Op 3 . - CDS 75949 - 76578 606 ## COG1636 Uncharacterized protein conserved in bacteria 86 29 Op 4 7/0.000 - CDS 76587 - 77153 560 ## COG2059 Chromate transport protein ChrA 87 29 Op 5 . - CDS 77131 - 77688 535 ## COG2059 Chromate transport protein ChrA - Prom 77746 - 77805 6.4 - Term 77769 - 77822 6.1 88 30 Op 1 59/0.000 - CDS 77858 - 78250 510 ## PROTEIN SUPPORTED gi|228004193|ref|ZP_04051172.1| SSU ribosomal protein S9P 89 30 Op 2 . - CDS 78263 - 78703 582 ## PROTEIN SUPPORTED gi|227485332|ref|ZP_03915648.1| ribosomal protein L13 - Prom 78799 - 78858 2.0 90 31 Op 1 . - CDS 78875 - 79618 899 ## COG4822 Cobalamin biosynthesis protein CbiK, Co2+ chelatase 91 31 Op 2 . - CDS 79620 - 80426 1217 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase - Prom 80599 - 80658 6.1 + Prom 80487 - 80546 10.5 92 32 Tu 1 . + CDS 80570 - 81253 802 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 81264 - 81316 2.1 - Term 81250 - 81303 3.1 93 33 Tu 1 . - CDS 81310 - 82035 273 ## COG1396 Predicted transcriptional regulators - Prom 82131 - 82190 6.7 - Term 82138 - 82193 -0.3 94 34 Op 1 17/0.000 - CDS 82202 - 83662 1365 ## COG0168 Trk-type K+ transport systems, membrane components 95 34 Op 2 . - CDS 83665 - 85032 1705 ## COG0569 K+ transport systems, NAD-binding component - Prom 85063 - 85122 14.8 - Term 85106 - 85155 3.4 96 35 Tu 1 . - CDS 85166 - 86368 1816 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 86480 - 86539 10.2 - TRNA 86550 - 86626 90.9 # Met CAT 0 0 - TRNA 86692 - 86768 94.9 # Ile GAT 0 0 - TRNA 86785 - 86860 84.3 # Trp CCA 0 0 - TRNA 86894 - 86969 87.4 # Phe GAA 0 0 + Prom 86727 - 86786 5.0 97 36 Tu 1 . + CDS 86896 - 86958 59 ## - TRNA 86973 - 87066 73.0 # Ser GCT 0 0 98 37 Tu 1 . - CDS 87045 - 87203 296 ## - Prom 87280 - 87339 1.5 - TRNA 87096 - 87186 67.1 # Ser TGA 0 0 - TRNA 87193 - 87268 84.8 # Lys TTT 0 0 99 38 Tu 1 . - CDS 87341 - 87514 258 ## - TRNA 87355 - 87430 84.8 # Lys TTT 0 0 100 39 Tu 1 . + CDS 87434 - 87841 261 ## - TRNA 87435 - 87510 78.6 # Gln TTG 0 0 - TRNA 87514 - 87590 92.7 # Arg TCT 0 0 - TRNA 87594 - 87667 80.0 # Gly TCC 0 0 - TRNA 87672 - 87757 68.8 # Tyr GTA 0 0 - TRNA 87820 - 87895 91.2 # Thr TGT 0 0 Predicted protein(s) >gi|325481101|gb|AEXN01000014.1| GENE 1 3 - 786 1075 261 aa, chain - ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 16 261 25 266 269 206 52.0 3e-53 MSKDLIIGLLIPFLGTSLGSAMVYLMKNELSHKLQKSLSGFAAGVMVAASIWSLLIPAMD MVEKDMGRMAWIPAVVGFGVGIAFLLFLDSVIPHQHVDSDVAEGPKNESLRKTTMMVLAV VIHNIPEGMAVGVAFAGVLAGNTEMTMAAALVLSIGIAIQNFPEGAIISMPLKSQGIGKN KSFIMGVLSGAVEPIAAVITILLSQIMIPILPYLLSFAAGAMIYVVVEELIPEATGEGED HSNLGVIWFSVGFAVMMILDV >gi|325481101|gb|AEXN01000014.1| GENE 2 805 - 3168 2876 787 aa, chain - ## HITS:1 COG:FN0857 KEGG:ns NR:ns ## COG: FN0857 COG0058 # Protein_GI_number: 19704192 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Fusobacterium nucleatum # 21 787 23 783 789 774 52.0 0 MNKNKFMESYIENLQRITLKNFKDTSDKDRYFALCDTIMELINQEWRNCKNRTRKSRKAY YFSAEFLVGRSLGNNLINLGIYDEVKEILKEIDIDFESIENFEDDAALGNGGLGRLAACF MDSAATQKLDMYGYGVRYREGLFKQKIENGFQVEEGDHWIKDGDGWSIRVESDSKIVKFR DQTVKAVPYDMPMLGFENEQVNTLRLWQAEPFEEFDFSYFNNFQYDKAVEEKNRAEDITR VLYPNDIQREGKVLRLKQQYFFCSASIQDMVAKYKQYFQNDLQFEEFSKYHVIQLNDTHP IIAIPELIRVLVDENSIDFEKAVEITKNTFAFTNHTVLQEALETWPKDIMLEVCPRCFEI IEQLNENVVKEFKKKGLSEEAIDPYRIIRFDQIRMANLAIVMSKSVNGVAKLHTQILKDD TFNNWYKLMPEKFNNKTNGITPRRWLVYSNIRLSNFITEKLGTGDWKYDLTKLKGLEKFL DDEKTLEEINQIKYENKKDLAKYILENEGISIDPNSIFDIQIKRIHEYKRQHLNLIHIIN LYHELKNNPDMDFYPTTFILGGKAAPGYFRAKAIIKLANEIARVVNNDPYVNDKIKVVFV NNYRVSYGEKLFPAADISEQISTAGKEASGTGNMKFMLNGALTLGTYDGANIEIFENAGV ENNYLFGAKVEELNEIYNSYNPKEFYHTNEDIKDAVDALLSGELKDNDSYMFLDIYNSLI NPQGGEKADNYFVLKDFEDYKKTHEKINKEYADRLTWARKSLKNIANAGYFSSDRTILEY AKDIWKL >gi|325481101|gb|AEXN01000014.1| GENE 3 3225 - 3845 652 206 aa, chain - ## HITS:1 COG:no KEGG:Apre_0412 NR:ns ## KEGG: Apre_0412 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 200 1 200 202 203 50.0 4e-51 MKLKRSKKGEFVPVVRKNKIYFGGFQNMLKDIGVSKFYRDRSCVVTAFTNTYLYLFKDGE KFSYDEFNDYQYWFFKTLRPKIYGIPTARMLDFKLNRIRKSYHLRLKSHILEDLPIKRHS IDEIANFINGALAKDLPVIFFNWLSSSVDVMKHHGVTITQLDKKEDDYILTLSSWGEVYK ISLKEFLNQARTYTGFIYFERDSIVA >gi|325481101|gb|AEXN01000014.1| GENE 4 3846 - 5042 1251 398 aa, chain - ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 1 379 1 380 383 164 30.0 4e-40 MKKLDQKNSQLLRVILISILVFFTFWYIKNVTNALTVFLAVIQPFLIGFMLAFIINLPMN FFEKKVFSKVFKTEKTKKLIPVFSLITSWILFILGITIFLNVLIPRISSAVTTLIDRFPV FLNDFVKLLNKNKITKRFADDVQKYIYSVDWNHKLIQVRDYFMGEAGNIFDKTTTIINSV SSTLVTVATSLIFSVFVLISKKDLKILANRVIYSIFKKETADEINKVASLSYSTFASYIN SKALSSLILGLLVLIGMFILKIPFAAMAAIMVAIADFIPYVGPLIATIIMMILIFIESPF QSLVFLIFLLIVQQVQGSIIYPALAGKTIGLPSIWIIVSIAIGGSLFGVVGMLVSIPIAS ILYTLMNEKMDKKLEKKEISKDQIKELAEKVHYKKEED >gi|325481101|gb|AEXN01000014.1| GENE 5 5141 - 5764 880 207 aa, chain + ## HITS:1 COG:CAC1731 KEGG:ns NR:ns ## COG: CAC1731 COG1564 # Protein_GI_number: 15895008 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Clostridium acetobutylicum # 18 199 20 207 211 85 32.0 8e-17 MKKCYIFAGGEFDGFFDQVKEGDYIIGADKGYTYIEKIGLRPHIIIGDFDSAKKPDFENK IVLKPEKDETDLYAAINIGIKKGYKKIIVYGALGGRISHTIANIKILEDFKKKGIDIELK NKNQRLFVIDKNFIEKKQIENTYVSLFALTEKVENLSLINLKYQLKNYTLENDMHIGVSN EPIGKEFKIEFDKGMVLVIYENKNTYK >gi|325481101|gb|AEXN01000014.1| GENE 6 6323 - 6676 437 117 aa, chain - ## HITS:1 COG:BS_yusI KEGG:ns NR:ns ## COG: BS_yusI COG1393 # Protein_GI_number: 16080333 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Bacillus subtilis # 1 107 1 107 118 107 54.0 5e-24 MEVLLIGYKSCSTCKKTEKFLEERNISYKFQDVKEEKPEKDQIIDLYEKSGLDIKKFFNT SGQIYRKLNLKDKLKDMSEDEKLDLLASDGMLLKRPILVNGDDVVVGRLNIEKYIEK >gi|325481101|gb|AEXN01000014.1| GENE 7 6724 - 7176 757 150 aa, chain - ## HITS:1 COG:SA1984 KEGG:ns NR:ns ## COG: SA1984 COG1302 # Protein_GI_number: 15927762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 8 139 24 153 169 92 48.0 3e-19 MTEKTFDKEYEKGLEKDAEIEQEVSKLSIADKVVAKISRIAVNRVDGILDMKASFFDSVS SVFQSSTEQDTSGVDVEVGEKEAKVNMQIILEYGKSAPRIFEQIKKVVRENVKEMTGLNV ITVNVDVVDVMTREEYKAKKSDSDDKKDRR >gi|325481101|gb|AEXN01000014.1| GENE 8 7196 - 7516 476 106 aa, chain - ## HITS:1 COG:no KEGG:Apre_1465 NR:ns ## KEGG: Apre_1465 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 8 105 1 94 96 82 43.0 6e-15 MDKNNENLDLKNQENEKQVSTYDVEMRKLDIKERKEAECKKFKEENKYKIISLILGIVTI GSLFDYGFFRTLGIWIVLGFCYCLGGWLDKDPKVIGFVINLLKKFQ >gi|325481101|gb|AEXN01000014.1| GENE 9 7525 - 8064 681 179 aa, chain - ## HITS:1 COG:no KEGG:Apre_1466 NR:ns ## KEGG: Apre_1466 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 179 1 179 179 100 35.0 3e-20 MGGFKKFLWSLMTIVLIIIAAVLGTVSLVDDGIRHDLLSYLEIQNYRYVLLGVAIAVLVF AIILLIDIIANQNDKREYLVEDNTGDIFITKNSLDATVDSAVKKFHGAELTDSKVKIIKG NNIDANVKCDIFGERDFEDIGRKIQAEIEFALKNLTGIENVSAHVQLNKAQKSQEREIR >gi|325481101|gb|AEXN01000014.1| GENE 10 8338 - 10038 1728 566 aa, chain - ## HITS:1 COG:CAC2714 KEGG:ns NR:ns ## COG: CAC2714 COG0488 # Protein_GI_number: 15895971 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 555 1 559 643 480 49.0 1e-135 MIVASVSNLEKSYPNKDVFSNISFTINKGDKIGLIGNNGSGKSTLFNILTGEISKDKGNI HIPNDISLGYLKQQLGLMSNKSIYDYCLDVFKDLISLEKNIRDLEVKMSEEKNPDKLDEI MKEYAKKSEEFEKKQGYSYKSEIRGVLIGMGFEEEDFQKEVSLLSGGQKARVELACLLLQ KPDLILLDEPTNHLDIKAINFLENFVKNFKGSVIVISHDRYFLDATVSKIFLLENESLKI YNGDYTSFMRQRKKDLKVQNHLYKSQQKEIKRQEEIIDRLKNLGGSKRKRGISQSRSRQK LLDKMDRVEKPDSLNDSINIRFTPRIISGVDVLSVDKLKKSYDKEIFEDISFNIYRNDRV AIIGENGVGKTTLFKIILNQERKDEGQIKLGSSVKIGYFDQEQKSLNTDNTLFEEIREAY PNLTNFEIRSYLAKIMFYQDEVDKPINELSGGQRARISLLKLMLSDCNFILMDEPTNHLD IDSKEALEDALIAYEGTVLVISHDRYFLNKIAVKILDMHKDNMKEYLGNYDYYVEKIKEE SMEDEKKSSMTQTQIKKEEKRKIKKT >gi|325481101|gb|AEXN01000014.1| GENE 11 10045 - 10683 809 212 aa, chain - ## HITS:1 COG:CAC2713 KEGG:ns NR:ns ## COG: CAC2713 COG2344 # Protein_GI_number: 15895970 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Clostridium acetobutylicum # 1 201 1 203 214 214 52.0 7e-56 MKKELSVSLSVIKRLPKYYRYLEAINEKGIVRVSSKELSQITGLTASQIRQDLNHYGCFG QQGYGYNVRELMDELAKIIGVDKEYSMVIIGYGNIGHALYQYSGFKSLDYNVKAVFDKNN EEVSTDTLEVLSIDKLKDYLKENKIDIGIITTPKEGAQEVCDILCEGGIKGIWNFAPVDL KTKNNVVIENVHLDESLFTLTYFINSPEDFAF >gi|325481101|gb|AEXN01000014.1| GENE 12 10698 - 11135 253 145 aa, chain - ## HITS:1 COG:no KEGG:Apre_1469 NR:ns ## KEGG: Apre_1469 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 132 1 131 214 73 34.0 2e-12 MKKRFERFLSTSLLLTILVVLLSNLMLILTKINPQIVNHIWNISFIISWVIMLAYPLYIL MEKNSRGYSIFLALISVVVFSLLSFHALLVISNYTPLLPKYIAVDGRITDYWQEIFYSGL IIIYVGHIINLVLIKRIKNKEEIKN >gi|325481101|gb|AEXN01000014.1| GENE 13 11144 - 12970 2439 608 aa, chain - ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 1 605 4 605 605 671 59.0 0 MKREDIRNVAIIAHVDHGKTTLVDGLLKTSGIFRENQKVDERVMDSNSIEKERGITILSK NTAINYKDIKINIIDTPGHADFGGEVERVLNMAEAVVLVVDSHEGPMPQTKFVLRKAIEL NLPAIICINKVDRPDQRVEEVMDEVLDLFISLDADESYLDSPFVFASAKQGWASLEFGEE KEDMTDLLDTIIEYTPAFEAKEDSPFKVLVSTTDYDNYLGRIAIGKVESGKIKKNDSCII VNYNDKDRKVKSKIVTIYEFEGLERSEVEEASFGSIVALSGMEDINIGDTICTESDMDPI EFTKISEPTLSMTFSVNNSPFAGRDGDYVTSRHLRDRLFKEKETDVSLRVETTDSTEAFK VSGRGELHLSVLIENLRREGYEFQVSKPEVMFKKDENGKTLEPIELATIDVDQEYTGAII EKLGLRKGELVEMAPNSSGYTRMIFRIPARGLIGYRQEFLTDTKGTGILNTEFDSYERYK GDIAKRQAGSLISFETGVATTYGLHAAQSRGQLFVKPQDEVYEGEVIGSNAKGIDIDVNV CKKKKQTNVRASAADEALVLSPAKIMSVEEMMEFVEEDELIEITPHKLRIRKRILDNNLR YKAKKNSK >gi|325481101|gb|AEXN01000014.1| GENE 14 13089 - 13487 562 132 aa, chain - ## HITS:1 COG:no KEGG:Apre_1471 NR:ns ## KEGG: Apre_1471 # Name: not_defined # Def: putative signal transduction histidine kinase # Organism: A.prevotii # Pathway: not_defined # 1 122 1 122 127 103 52.0 3e-21 MELIRNTMPTDLEAIKKFRDELVLNLKNKKIDEDLIFKIRLILDELIINSYEHGNRCQYD KIIDTTFIMDDDCCLIKVKDEGEGIDYLYENDGLNDHGRGIKLVYSLADDLIIKDNIIIA LVKRNSKIKLYI >gi|325481101|gb|AEXN01000014.1| GENE 15 13624 - 13782 431 52 aa, chain + ## HITS:1 COG:CAC2778 KEGG:ns NR:ns ## COG: CAC2778 COG1773 # Protein_GI_number: 15896033 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Clostridium acetobutylicum # 2 52 3 53 54 75 72.0 2e-14 MKYVCTACGYIYDPANGDPDNGIDAGTEFNDLPEDWVCPVCGVGKDMFEEQE >gi|325481101|gb|AEXN01000014.1| GENE 16 13968 - 14438 297 156 aa, chain + ## HITS:1 COG:L114884 KEGG:ns NR:ns ## COG: L114884 COG0398 # Protein_GI_number: 15672877 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 5 148 47 190 201 66 31.0 2e-11 MYDYIGAFSYLAPLIFIILKVLIGFVPFIPTTIFIVIGFALFGQKFGLFLNYITGLMTAV LNYTLTRIYGKRFLNFFLPKKSIKKYESATRQSTKRFKKVLFLTSAMPFAPDNALSMVAG FKKLRFKEYIKIMTVAKFIEILIIAYLMYHLKLFLA >gi|325481101|gb|AEXN01000014.1| GENE 17 14469 - 15299 734 276 aa, chain - ## HITS:1 COG:PM1139 KEGG:ns NR:ns ## COG: PM1139 COG1442 # Protein_GI_number: 15603004 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Pasteurella multocida # 1 253 1 251 302 89 31.0 7e-18 MNVLVSCDENYINPLKTMLYSLFKSNDIQIEIYLIHKDIRDEKIKEIEKFVEKASIGKGK LNPIKVEDLFSKAKTTFYYTEEMYYRLLAYKYLPKSLDRILYLDPDVLVLNSCEELYNMD LSDNYFAAATHTIPTVQSANVARLSLTSGHKDIENYFNSGILMINLELARNSEKYEKEVL NYVENSKSLGLIMPDQDLLNVVFRNKIIKIDEIKYNYDARRYLAYKLKDKKYKISYIISN TCFLHFCGKRKPWLDENNLGVFTSLYLYFWKNAMNI >gi|325481101|gb|AEXN01000014.1| GENE 18 15313 - 16287 786 324 aa, chain - ## HITS:1 COG:CAC0496 KEGG:ns NR:ns ## COG: CAC0496 COG1284 # Protein_GI_number: 15893787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 47 318 5 276 279 159 35.0 5e-39 MNENIGESNFSEKEKLKHILERNAAIKILRKDRKKDKFAHEPLSPRKKFFLMSFASILMA NGTHFFKYPNHFVIGGVEGASILLSNSLPLTPAFITLVLNLSLLVLAYFILGKNFVIKTG YVSILNSLTALLLSKIMPHTTPFTDNKLLELFCAVLIPALGSSILFNLSASSGGTDIIAM IINKYTNLNIGKSLLIGDSILTLMSIKMFGAEIGLLSCLGLLMKGLVVNQFIASFNTAKL FLIITSKQEEISVFIRDKLNRSATVIDGTGLYYKKDQSVFLCVTNDYEAALFRKYIREID PRCFITVLDTSSIIGKGFYSTDLH >gi|325481101|gb|AEXN01000014.1| GENE 19 16344 - 17525 1400 393 aa, chain - ## HITS:1 COG:no KEGG:Apre_1476 NR:ns ## KEGG: Apre_1476 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 393 1 393 393 596 75.0 1e-169 MDRLIGTVSMGVRTPIIETGDNLVDIVFDSVNKAVESKNIELKDKDVVCVTESLVARAQG NYATCEQIAKDINNKFKADEIAILFPILSRNRFSIMLKAFALSGKKLHICLSYPQDEVGN YIMDRMDLFESDVNPYSDILSEEEFRKLAGDYKHEFTGVDYISLYKEMAKNSEVHFFNNP KDVLKFTKSVLVCQIHTRDLTKKLLEKSGAEEVYGLDEIMTQSVDGSGYNEDYGLLGSNL STDDVVKLFPRDGQVFVDELQKRLIEKYNKEIEVMIYGDGAFKDPVGKIWELADPVVSPA YTKGLSGTPNELKIKYIADTELKDLSIDERTEKMRERISHKKDDLKGTNETLGTTPRQIT DLLGSLCDLTSGSGDKGTPVVLIQGYFDNYSND >gi|325481101|gb|AEXN01000014.1| GENE 20 17593 - 17967 269 124 aa, chain - ## HITS:1 COG:no KEGG:Apre_1477 NR:ns ## KEGG: Apre_1477 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 124 1 123 123 101 51.0 1e-20 MKKRHGIDELSIGLVWFAIGLMLLNYFLKIDFLQALPLIIVFYAIFRTISTNEIKRNSEN YIFKLKFLNPIQKKYRKIKRKIFGDKKYKYIKCKSCGQELRIPKGKGKIMVKCPKCKTKQ KVKS >gi|325481101|gb|AEXN01000014.1| GENE 21 17970 - 18707 924 245 aa, chain - ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 3 242 5 245 245 278 56.0 7e-75 MDNKINDVKKIIKESNNIVFFGGAGVSTASGVPDFRSATGLYNRENNSSYSPEYMLSHEF FVNHPDKFMEYAKENLMIEGIKPNDCHYALTKLEKMGKLKGIITQNIDSLHQEAGSKNVI ELHGNLRDYYCTSCGKNFDLSYVKKFNNLVTCDKCGSVVRPDIVLYGESLNNDNINYAVN LISQADVLIVGGTSLVVYPAAGLIDFYRGKKLVVINRDPTPKDNKADYLLKGDISKIMKE LVEGV >gi|325481101|gb|AEXN01000014.1| GENE 22 18733 - 18897 258 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696632|ref|ZP_03304760.1| ## NR: gi|212696632|ref|ZP_03304760.1| hypothetical protein ANHYDRO_01172 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0910 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_01172 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_0910 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 54 1 54 54 69 100.0 1e-10 MNKNMYIGIIGGVIISIILNNAYNFPNKEMVAVICAVLGAFFGASIDNKFKKHK >gi|325481101|gb|AEXN01000014.1| GENE 23 18905 - 19639 544 244 aa, chain - ## HITS:1 COG:no KEGG:Apre_1479 NR:ns ## KEGG: Apre_1479 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 244 1 244 244 63 25.0 5e-09 MRKYLKYDVKSNMKFFISTVATFVILLISLLSIKTLGAISQSLEINSAINSIEIIVVVVF ILTISYFIINSFYKDLYTNRSILTFSLPISAKEFISAKLLVINIFFWLLVFLSVFLFYVV GIYMNLKSLLSLIFIMILVNIISLLIFLYMQMDRFMLRRKTSAILIFIIMVLILGLGFFV NKNFLFLNNKMLLKNYNYMAFIYAYIKYKGAFYINLTSFSYYIIVTLILFRINAKILRKD LDLS >gi|325481101|gb|AEXN01000014.1| GENE 24 19648 - 20436 486 262 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846947|ref|ZP_08169804.1| ## NR: gi|325846947|ref|ZP_08169804.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 262 1 262 262 330 100.0 8e-89 MIKFLKYELKRSRGFFLLMALLSIISVAITGVFYKFNSFDMENKNFSFFILLLALALIIL SICLIFFTVRFKRDIFDKSSYITFTINVSVARIIFAKFLASVLVGFLSLLIFVGSLILGA NILEISKGLVNIFPSSLLAYVVVGGIYYSIAYLLLTLGMTLSKVQIFKRYYSFVTVVLSI VLFTIVVWLLRNIYQISPVVLSFKNFSIQRLININGIDISMLYNGLDGKIIGINIWMLIF SVLIIALTFFYNVFLIEEKIDF >gi|325481101|gb|AEXN01000014.1| GENE 25 20433 - 21131 248 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 232 1 234 305 100 30 3e-20 MDNILEIKNLKKTYGKKNVLDGINLKLEKGKILGLMGPNGSGKTTLLKCIMGLIKPNDGE ILIDGKKVGVDTKKIISYLPDAYHLYDNLTIEDTVNLYKDFYDDFNMRVCKELFEFMKIP KEGYSDKLSKGMKERLLLALTLSRDTKLYILDEPIEGVDPIAKDMILSAIIKTVDIGRTI IITTHQIGDLENLFDRAAFIQRGQILMEEDAEDLRDKYKKQMVDLYKEIFVI >gi|325481101|gb|AEXN01000014.1| GENE 26 21124 - 21474 537 116 aa, chain - ## HITS:1 COG:no KEGG:Apre_1481 NR:ns ## KEGG: Apre_1481 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 116 1 116 116 78 39.0 1e-13 MEDRSVNNEIRNFVAKNIINDFLKDGDKFYEKEFLINKFRVNPSYVDKTYQRLLDEDLIE AKSDYYYMKIDESKKNALIVEFANGYLNDFLKNMNSIGISNEGVYDFVSLRMRANG >gi|325481101|gb|AEXN01000014.1| GENE 27 21503 - 21757 344 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846938|ref|ZP_08169795.1| ## NR: gi|325846938|ref|ZP_08169795.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 84 1 84 84 135 100.0 1e-30 MICLDGFEFKSRDEAFSYLNEKIDFEYEVDNLDGLFDCLSMVDEKIVIENYPIIYKNLND YGEKFLDCFMKASLLFDLEIDFIS >gi|325481101|gb|AEXN01000014.1| GENE 28 21758 - 22009 259 83 aa, chain - ## HITS:1 COG:no KEGG:Apre_1483 NR:ns ## KEGG: Apre_1483 # Name: not_defined # Def: guanine-specific ribonuclease N1 and T1 # Organism: A.prevotii # Pathway: not_defined # 1 81 74 154 157 120 71.0 2e-26 MTKKEAKKLGWIPSKGNLWEVTDKRVIGGDYFGNFEKKLPEANYKECDVNYFGGRRGGER LIYDEDFNIFYTNDHYKTFTKEN >gi|325481101|gb|AEXN01000014.1| GENE 29 22006 - 22206 212 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696638|ref|ZP_03304766.1| ## NR: gi|212696638|ref|ZP_03304766.1| hypothetical protein ANHYDRO_01178 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01178 [Anaerococcus hydrogenalis DSM 7454] # 1 64 1 64 149 103 95.0 4e-21 MKIRNFFYKFILSFFLIFAFTGCVKHENINSNENIESKNILEDKAYYKKDDVVSYIKSYK NFQKII >gi|325481101|gb|AEXN01000014.1| GENE 30 22250 - 22696 580 148 aa, chain + ## HITS:1 COG:FN1602 KEGG:ns NR:ns ## COG: FN1602 COG1683 # Protein_GI_number: 19704923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 145 5 151 156 120 43.0 8e-28 MNVLISRCLLGINCRYDGKNNEIKNLKEKFPQINFIDVCPEVDSGMPTPRKPCEIKNSKV INIDGEDFTKEFERGSQIALDLCKKHKIRVALLKAKSPSCGKDLIYDGTFSKKLKKSDGI TCQVLKKNGIIVFSEKEIEDFYSYLSAK >gi|325481101|gb|AEXN01000014.1| GENE 31 23323 - 24258 1356 311 aa, chain - ## HITS:1 COG:BB0679 KEGG:ns NR:ns ## COG: BB0679 COG1079 # Protein_GI_number: 15595024 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Borrelia burgdorferi # 6 306 7 308 311 210 41.0 3e-54 MLNLTVLGLIIGNTLSNATPVLFTGLGGMMSEKSGVVNIGLEGMMTIGALVAATVGYYVG NPWLGFLAGGLAGMFFGLIHAIVSVTFAGDQTISGIAINTLAPGLALFLARLFFDGATQT PSIPLENKIPRLFDGLIKNQGLKNIFSQYATVYLALISVILLYVFLYKTKWGLRLIAVGE HPKAAETLDISVRKIRYLAVMFSGFMGGLGGASMSLAVVSVFSPTLIAGQGYIALVCVIF GNWKPQGVLVGSLFFGLTQAIATYLTGTSIHLPMEFISMIPYISILLFLILFNKKSKAPK VSGKPYLTEDI >gi|325481101|gb|AEXN01000014.1| GENE 32 24251 - 25345 1172 364 aa, chain - ## HITS:1 COG:BB0678 KEGG:ns NR:ns ## COG: BB0678 COG4603 # Protein_GI_number: 15595023 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Borrelia burgdorferi # 7 339 15 357 383 222 39.0 8e-58 MNKKKSFANSKLLFTLVSIILGLLVGALVLFLAGYNPIEAYGKLIEGVFKSPRNIGWALV NSTPIILTGLGVCFAFQTGLFNMGAEGQFIIGTTVGFLLGYLLNLPPLIHVILTIIIAIL AGFIYGGLAGFIKAKFGIHEVISTIMLNWVAFYLQNFVVYRYQKPNSMGTFDIKDSAKVT LFTNAGQRFDGFFGKFFRAPIHLGIILAIISVIIIWFILEKTSLGYKLKAVGLNREASEY GGIDANKKIVQSMAISGALCSLAGVTQIMGYTYSLPLLSAMENFGFDGLAVSLLASNNPI GCIFSGLFLGSLKYAGSNLQRTMGVPSELISIIIGTIILFTAIPLIFKIIRARINKNRKA GNNA >gi|325481101|gb|AEXN01000014.1| GENE 33 25338 - 26861 201 507 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 263 484 6 215 305 82 29 9e-15 MDKYLNESPIVSLKNIHKSFGDKKVLKGVDFDLHKCEVHALLGENGAGKTTLMNILYGMF DQSDGEIYIKGEKIINNSPKKAISLGIGMVHQHFMLVEPFSVTENIILGYEGKKVIIDRK KARDEVEKLSKEYGLLIDPDSKVSDISVGQQQRVEILKALYHGADILIFDEPTAVLTPQE INEFIEIVNKLTELGKSVIIITHKLKEIKAMADTCTVIRRGEFIDKLVVKDVSEAELAEK MVGRDVSFNVKKEKIELGDEIFKIEDLWVKDNRGVDKVKGLNLSIKKGEILGIAGVDGNG QTELIDAISGMRKSQKGKVTLKGEDITNKNPRNIIDLGMNQIPEDRQKRGLVLEYPIKDN LILENLDKDFSKKGILDFKKIEENANSLIEKFDIRPNDMNEKAGSLSGGNQQKVIIAREI TNNPDLLIAAQPTRGLDVGAIEFIHQYLVELRNQGKAVLLVSFQLDEVMDLSDRICVIYD GKIVGELDTKQTDEYEVGRLMAGGDHE >gi|325481101|gb|AEXN01000014.1| GENE 34 26961 - 28025 1584 354 aa, chain - ## HITS:1 COG:L61620 KEGG:ns NR:ns ## COG: L61620 COG1744 # Protein_GI_number: 15673420 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Lactococcus lactis # 1 341 1 348 350 215 43.0 1e-55 MKIKKIMAGALTLALSLSITACGSKKDASNDESGSNAKKAEVSATMVTDQGGINDKSFNQ SSYEGLKAYEKDGKVKFDYIESHKDSDYQPNLESALDSESDIIFTVGYALFDATSKAAKE NPDQNYAIIDNANPDKVKNLLGITFADHENSFLVGYIAGMTTKSNNVGFVGGMESAVIDR FEYGYRAGVKEAAREKGQDIEVQVQYANSYADQAKGKNIANQMYQKGADVIFHAAGGTGI GVFEAAKENNKYVIGVDRDQKDEAPDNILVSTIKGVGKAVQLTIDDYKDGKFKGGETKSY SLKDGDALGIAYGDNDLVDQKVKDKVEDLRNQIVDGKIKVPQNEKEFKSMGYDK >gi|325481101|gb|AEXN01000014.1| GENE 35 28113 - 29153 1444 346 aa, chain - ## HITS:1 COG:PH0737 KEGG:ns NR:ns ## COG: PH0737 COG1363 # Protein_GI_number: 14590612 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Pyrococcus horikoshii # 4 342 2 333 336 271 43.0 1e-72 MEKETIISYIKDLCTRPSPTGFTKKCEKYLMEEFKKIGYKPYQNNKGNVIVPIYENENNK NDGLLLSAHIDTLGLMVRSIKEEGGLQVTNLGGFPLNYGEFENVKIFTRDGKEFEGVFRL NEPSVHGSDTPRVSKRNFDEMEVVLDEIVESDEDVEKLGIGAGDFVAFDPRFRYSNGFIK SRHLDDKASSGVLLALAKEIKKENFKFNRNIYMMFTTYEEVGHGASSGHPDGIKDMIAVD MGVVYDDLKTNDRMVSICAKDSSGPYNFDLTNDLINTAKNIGIDFAVDIYPFYGSDASAA MTSFYDYRHALVGCGISASHGYERCHEKALMGLFSLLKTYVEKYKN >gi|325481101|gb|AEXN01000014.1| GENE 36 29242 - 30075 1061 277 aa, chain + ## HITS:1 COG:L0015 KEGG:ns NR:ns ## COG: L0015 COG0580 # Protein_GI_number: 15673226 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Lactococcus lactis # 44 276 8 239 245 219 52.0 4e-57 MCYNISVNIFTVKYKREHATIIYIFVAFFIFTSISQEDIMRDIILGEFFGTMLLILLGDG VVANVLLNKSGQKGAGPVQITFAWGLAVMIPACIFGALTGAHFNPALSIALAFNGGIEWN TVPSYIIGQMLGAFVGAILVYILFKDHYDATSDDPITVRATFCTAPTIPNTFRNLLSEII GTFVLVFAILGFGNVAGAGMGGVDKLYVFGLIVSIGMSLGGLTGYAINPARDLGPRIAYA ILPFKNKVDPNWGYSWIPVVGPIIGGIIAVLVYNFIF >gi|325481101|gb|AEXN01000014.1| GENE 37 30116 - 31591 1914 491 aa, chain + ## HITS:1 COG:CAC1322 KEGG:ns NR:ns ## COG: CAC1322 COG0579 # Protein_GI_number: 15894602 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Clostridium acetobutylicum # 1 473 1 469 475 345 42.0 1e-94 MYDVIIIGAGVSGASIARRLSRYKLNILILEKELDVSMGASKANSAIVHGGYAESHDELR GRICYKGRVEFNKLNQELNFGFLENGSLVLAFNEDDKKELEKLYKMGLENDLDDIEIIDQ EKLREIEPNVSDDAIAALYCKGAGVCSPYEYVIALVENAIENGAKLKLQSEVVDIKKDGE IFKVKTSDDNVYEGKFVINASGLNGAKVSSMITETDFTIHPRSGEYLLMQKGTGEKIKQV LFQTPSPKSKGILVTRTYHNNLLLGPDAIDEEEIDLGTHIERLAEIYKLGKKSVKDDVID LKKFIRSFAGLRPASSTGDFIIENTKTSGFINVVGIQSPGITSSPEIAKIVENILRDLDL KLEDDPSYNPNRRPIIEYKELEDFNKIKDKVDLPLGNPERLVCRCEQVSEKTIRDAMNRG IPCLSFDAMKRRTRCGMGFCQGNFCRNRVIEVMEDESGEKIKSNKFDSEHSGISRINKKD INDFIKELNEK >gi|325481101|gb|AEXN01000014.1| GENE 38 31623 - 33017 1602 464 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846923|ref|ZP_08169780.1| ## NR: gi|325846923|ref|ZP_08169780.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 464 1 464 464 754 100.0 0 MKKIVPVILLAISLTSCSKINENSNSSNIKSNYISQDEKALSNVKKEVKKDKKYDDLSFI DCYKDIIDSKLPYRIDEFGGNAKKTYLDEISSDGALYFNIIDHKDFDYPLLILSKKLNKS GIFSIVQYVGSGNYRTFNDLQMGQSMVVSDYLYKDKDGNLYIFDDSMKHIIGINKVDDRL LANYIYKPGSKGYGSLMVDDFDTDTGENTPIINERFPNGADALGAMMIDPEKEEEFSDED FNKFKEGLKPIEMFALSEDEFYKKAKEFGYKDENSQGENKDDKKIKQVNNENIEETDQYK KLDSFIRENVDLYVNEDGGDYVYIGDYDNNGKLAAFVLGNSQNEREKILYFVDEDMQINR VREFDSMYIWVKNNKLMKAGDDEYLSLVTNNGGPRTDSFIFSVKNNQVYEPDISGQVMEF YQDDEDMFVDETNKLGENPKGSVRQGGKDHYKYNQDNRQFEKLD >gi|325481101|gb|AEXN01000014.1| GENE 39 33157 - 34671 2123 504 aa, chain - ## HITS:1 COG:CAC3634 KEGG:ns NR:ns ## COG: CAC3634 COG4166 # Protein_GI_number: 15896868 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Clostridium acetobutylicum # 4 500 44 545 550 355 39.0 2e-97 MDINIASEPETIDPQLNTASDGSIMISHMFESLLRWDDDGKGNAVLKPGIAEKWDVSEDG LKWTFKLRDAKWSDGKPVTANDFVYAWNRLVDPKTGADYEYMLDMVKGYEDKKLDISAPD DKTFVVNLNVKCPYFEEICAFPAVMPVRKDIVEKSETWTNSPDTYVSNGPFKLEKWDHNQ TLTMVKNPEYYDAKSVKAEKLAFHLQDDQNAIYAAYRSGDLDFVNSAPQEEIKKLLDTKE LKTLPYVGTYYVCFNTEKKPFDDPKVRKAFSLAIDRNFIVDQVTGRGEKVASGFVPAGVY DEKGAEGDDFRTVGGDYYSVKSEDYEKNIKEAKKLMEEAGFKDGEGFPQIDYLYNTDDNH KAIAEALQNMWQENLGVKVNLQNQDWNVFLKERKEGNYNIARNGWIADYNDPMSFIDMWL TGGGNNDAQYKNPEYDKYVKAAKATSDQKERMENMHKAEDILVKDDAVVAPIYFYVNPYM IKPNIKGMYYTPLGYYFFKSATGF >gi|325481101|gb|AEXN01000014.1| GENE 40 34662 - 34811 183 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696651|ref|ZP_03304779.1| ## NR: gi|212696651|ref|ZP_03304779.1| hypothetical protein ANHYDRO_01192 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01192 [Anaerococcus hydrogenalis DSM 7454] # 1 44 1 44 551 85 100.0 1e-15 MKIKAKLLVAVLSLSMLVSGCGGNNAKNNDASNSSAVNQEEGKKMEYWI >gi|325481101|gb|AEXN01000014.1| GENE 41 34801 - 35796 845 331 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 6 321 11 324 329 330 51 2e-89 MEDNKLLICENIVKHFKVQSSLNKSNEVHAVDDVSFYINKGETLGIVGESGCGKTTLGRT ILRLHEPTSGKIIYDGETIFDSEKNIRPEMYKLRRKMQIIFQDPSASLDPRMTVQEIVGE ALDIHGLYKKNRQERINELLRTVGLNEEHSNRYPHEFSGGQQQRIGIARALAVEPEFIVC DEPISALDVSIQAQIVNMLEDMQKEMGLTYLFIAHDLSVVKHISDRIGVMYLGKMVELVD AERLYENPLHPYTKSLLTAIPVPDPKLTRSLKRIKLEGEVPSAINPPKGCRFHERCPFAT EICKKEEPEFREVEEGHYVSCHNLGGIKNEN >gi|325481101|gb|AEXN01000014.1| GENE 42 35786 - 36793 562 335 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 329 1 329 329 221 35 1e-56 MENLKENKKEVLKIEDLSISFDTPVGEVKAVDSISYTLYENEIMGIVGESGSGKSVESYG IMGLLQDPGRVKSGKILYKGENVLDYDKQKMSEFRGDKCSMIFQNPMTCLNPVYTIGNQL MEALLVHKKCSKDEAYKKAVEMLENVGISNPKRRMKQYPHELSGGMRQRVMIGMGLICEP DILIADEPTTALDVTIQAQILELIKEFQERTKMSVIFITHNLAVVAQICDKVSVMYAGRI VEQASVEEIFYNPQHPYTKGLLKSMPRIDSKEQTRLESIKGSPVDMLNPPKGCGFSARCD SCMNICLRQEPPMIEMENGHKSKCFLHVKELVDGR >gi|325481101|gb|AEXN01000014.1| GENE 43 36801 - 37841 1140 346 aa, chain - ## HITS:1 COG:BS_dppC KEGG:ns NR:ns ## COG: BS_dppC COG1173 # Protein_GI_number: 16078359 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Bacillus subtilis # 25 346 20 320 320 252 41.0 9e-67 MEDLFSLNSKLKLEEFEFSESDFSDDDFDLATENDKENFMTKTPPTSYFQDALRRLKENK VAMVSLGFLIIVCIFAFIGPFFVKGDYTTQYRGDENLFPCLRYPFGTDKLGRDLMVRTMY GTRVSLIVGIFASLIVLVIGTAYGAISGYFGGKVDAFMMRFLDLIYSIPDVLVVILLSIG ISQPMKSFVNSSTSEIAKKIGVLGPALISIFIAFGLLYWVGMARIIRGQVLMLKKQEFVT AVEALGGSKKRIIRRHLFPNCIGQVIVMTAMQIPSAIFLESFLSFLGIGVSAPMTSLGAL AADALGGIYSYAYRLIIPSLLLSLMILSLNLFADGLRDALDPRLKK >gi|325481101|gb|AEXN01000014.1| GENE 44 37844 - 38773 957 309 aa, chain - ## HITS:1 COG:CAC3638 KEGG:ns NR:ns ## COG: CAC3638 COG0601 # Protein_GI_number: 15896872 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 305 1 304 306 271 46.0 1e-72 MIKYIIKRILQAIAVLLLVTCITFFLMKLVPGSPFASEKSQSPEVLEALNKKYGLDQPYS VQLKRFIVNALHGEFGVSLKMQKNRPVIEIIKEMLPTSVKLGLISLLWATLVGVPLGSLA AYNRDKKLDSFLRILTTIGISAPGFVVATLLLLFFGVKLKIFPTMGLNTIGSYFMPCFSL GFYPMCYIARLSRSSMLDAISQDYIRTARAKGVPESKILFKHALKNAFIPVLTYLGPLTA GIITGSMVVESVFSVQGLGRYFINSVLNRDYPIIMATTLFFAFMVIVMNMVVDILYRFID PRIDLTKGD >gi|325481101|gb|AEXN01000014.1| GENE 45 39110 - 39550 589 146 aa, chain + ## HITS:1 COG:SA2153 KEGG:ns NR:ns ## COG: SA2153 COG3279 # Protein_GI_number: 15927943 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Staphylococcus aureus N315 # 1 144 2 145 147 73 33.0 1e-13 MKVEIIIDENLDESLVKIYAPSYNEDIENIKRSLEATSVDMVVAFKDDEIYLLEYEEIIR CITKDKNVFIQSKDGEYKARMRLYELYERLNKNKFIKISRYEIINLDYVKKLDLSFKGTI AVEFKNGSISYVSRRYLKEFKKALGF >gi|325481101|gb|AEXN01000014.1| GENE 46 39560 - 39985 423 141 aa, chain + ## HITS:1 COG:no KEGG:Apre_1651 NR:ns ## KEGG: Apre_1651 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 101 1 102 143 67 44.0 3e-10 MKDLTKLLRSFLIGIGIGSIIEIIISLMAGELILGVPEFLKGQDSMLKARIIELFLYGGF GIISFIGNKIIKGDNLLRASILHFLILTIYFILVGFYLKWLPDIITALISLIFFILIYLI IWSVIYFSTKSEIEKLNEKLK >gi|325481101|gb|AEXN01000014.1| GENE 47 40020 - 40700 869 226 aa, chain - ## HITS:1 COG:STM4109 KEGG:ns NR:ns ## COG: STM4109 COG0176 # Protein_GI_number: 16767375 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Salmonella typhimurium LT2 # 1 212 1 212 220 156 39.0 2e-38 MKLLIDDANIEKTKEIYQYYLVDGVTTNPSILSKQKQSPRDVLSEIRKIIGQDELHVQVL SKNSKDIIKEAKLIVKEFGENTFVKIPSNKEGFKAMKELKKENIKVTATAIYSPMQAFLA MKAGARYVAPYVNRIDNLGYDGLYVVKKIQNIIDSNQFETEILAASFKNSNQALDLIEYG VGALTCGVDVINKFVDDRNVDRAVEDFSKDFEKIDPNKKTMIDYLN >gi|325481101|gb|AEXN01000014.1| GENE 48 40719 - 41531 986 270 aa, chain - ## HITS:1 COG:ECs5003 KEGG:ns NR:ns ## COG: ECs5003 COG1028 # Protein_GI_number: 15834257 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Escherichia coli O157:H7 # 3 270 4 268 268 299 55.0 3e-81 MDWLGLENKVVLVTGAASGIGKAVSEGLLESGANVIACDINKEKPEFNFENEKNLLYKVC DVTSRKDVKEAIDDGVKKYGSLDAIVNNAGINIPRLLVDPKKEGSEFELDDKVFDKVVDI NLKGLFYCSQEAAKIFVKQKSGVIINMSSESGLEGSEGQSIYAATKNAVNSFTRSWSKEL GKYGVRVVGVAPGILEATGLRTLSYETALAYTRSISVDDLRKGYSSTKTTPLGRSGKLSE VANLVCFLASDRSSYIHGVTINVAGGKTRG >gi|325481101|gb|AEXN01000014.1| GENE 49 41533 - 41895 503 120 aa, chain - ## HITS:1 COG:BH0773 KEGG:ns NR:ns ## COG: BH0773 COG3731 # Protein_GI_number: 15613336 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIA # Organism: Bacillus halodurans # 1 119 5 124 125 63 32.0 7e-11 MKAIYENKIKAQGELVEEFGSEMMIFFGDNAPDTLKDYCHLIDIKKVNGEIKAGDYFEVD GSKVKILAVGEEAQTNLENLGHLTVNLSENLDDLLPGAIICENGNLNKLEIGSTIKILEA >gi|325481101|gb|AEXN01000014.1| GENE 50 41904 - 42902 1316 332 aa, chain - ## HITS:1 COG:STM2833 KEGG:ns NR:ns ## COG: STM2833 COG3732 # Protein_GI_number: 16766139 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIBC # Organism: Salmonella typhimurium LT2 # 1 332 1 322 323 332 55.0 8e-91 MTKIRIEKGHAGFGGPLEIGPEGEKDTLLYITGGGAKPDIVDKIVELTGCQAVNGFKTSV AEEKIFAVIIDCGGTLRCGIYPKKGIPTINIMATGKSGPLANYITEDIYVSDVGLNQIKA LSKDESREKVVENNKKEDKKVSYSSDKKVSETLAEQSGNSFIQKVGMGTGRVIDIFFQAG RDSVQTVLNTILPFMAFVSMLIGIIQGSGFGNWFAKLLIPLANNIIGLVILGLVCSLPVL SALLGPGAVISQVIGTLIGSEIARGNIAPNLALPALFAINTQNACDFIPVGLGLAEAEKE TVEVGVVSVMYSRFLIGVPRVIVGYLASFGLY >gi|325481101|gb|AEXN01000014.1| GENE 51 42895 - 43455 809 186 aa, chain - ## HITS:1 COG:PM1971 KEGG:ns NR:ns ## COG: PM1971 COG3730 # Protein_GI_number: 15603836 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system sorbitol-specific component IIC # Organism: Pasteurella multocida # 1 181 2 182 184 204 54.0 1e-52 MDFLVNLAQSFIGLFELGAETLVSWMTGIVPKVLLLLVFMNALIALIGAERVNKFGKLCS KNKLLAYGVLPFVSAFMLGNPMALSMGKFLPEAQKPSYYASAAYHCHTNNGIFPHINPGE LFVWLGIAQGVEKLGLSTVPLAIRYMLVGLVMNFLAGWITDFTTKYVEKQQNIKLKRSID VEAHND >gi|325481101|gb|AEXN01000014.1| GENE 52 43479 - 43919 470 146 aa, chain - ## HITS:1 COG:no KEGG:Cbei_0335 NR:ns ## KEGG: Cbei_0335 # Name: not_defined # Def: glucitol operon activator # Organism: C.beijerinckii # Pathway: not_defined # 3 144 2 141 150 84 36.0 1e-15 MNNLIILGIFILFMYLLQYLFTFLQMNSFKKYFNEFIKDGKVAIGIKKGAIRAGSIVLFS VDDIGNIKNYAYIKGVSVFARFKKEDTFNNANIKDLDQELLKGLKLDKNLSLAILNAREN FIKALNGEKIEMEKSPLQKAFGFFKK >gi|325481101|gb|AEXN01000014.1| GENE 53 43931 - 45796 1673 621 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 9 382 7 400 499 78 21.0 5e-14 MIWKKIENRSLQLLEILERSSISEELLLEKLEISKKTLSNDVKQLNKKMKNCAFVNLKDK KLSLFVYDYNLYKRCVNIIKKEGESFNNEKYRLIYIIGYLFLNDTANMGDLSFEMMISKT TLNKDIEKLNNLIKDYRLKISGKPNVGICLQGEEIDIRNFVIENCYYEIIKENKNTKIVS KIIKDILSPYLIDEDTIEKMKMFLNVSISRINKGHNIENLSDNYAYDSNKFSFDIENILR DKVSHMFEIVLSHEELKFITVPIRGMRTPLITNKISDIKIGDEIYDLIEEIFMAIKKRMD LEVDLGKVKKEFTYHIYFLLNRIKLDYKIQNSLNDEIKKEYRVAYKMAEIASKVIEDKLD KKINESEKSYLASYFQIYIVEKLDLINKNSFKIAIYTTDEINGQSLKRKLKSMSPGNDLS VSILDSIDLNLNSFDLIITNKDIDTDINQISGEEAYNFAIIKERIENLREKKNLVLNKRF LKSVFLNELNDKKLFLLDGEDFNQNLTYMLDSLEDEMLISKDFKQKVIDREKKSSTIFSQ SVAFPHAKANKLTVALGINEKSYPKLIFLVGLPENLDEILVKLYDEIVTIANDENLVDKI SKIKSYSKLMEFFIKDTNLFR >gi|325481101|gb|AEXN01000014.1| GENE 54 45926 - 46285 569 119 aa, chain - ## HITS:1 COG:TM1434 KEGG:ns NR:ns ## COG: TM1434 COG3862 # Protein_GI_number: 15644185 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Thermotoga maritima # 1 115 1 115 138 96 41.0 1e-20 MKKELTCINCPLGCLVTVTMDEDGNVENVTGNTCKRGEVYARNEVKNPVRVVTSTVKVDG GKEYSVSVKTADAIPKNKMNEAMNEINKAKIKAPVHVGDVVIENIAETGISLIATANRK >gi|325481101|gb|AEXN01000014.1| GENE 55 46282 - 47541 2047 419 aa, chain - ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 3 418 2 415 417 446 56.0 1e-125 MKNYDLVVIGGGPAGLGAAARAYDEGIKNILVVERDEMLGGILNQCIHNGFGLHRFKEEL TGPEYAQRFIDEVEKRDIDVLLNTIVVDFANDKTITLMNEENGMFTVKPKAVILAMGCRE RPRGALNIPGSRPAGVYSAGTAQRMINLEGYMPGKKVVILGSGDIGLIMARRMTLEGADV QCVAEIMPFSGGLKRNIVQCLDDFDIPLYFNTTISSIEGDERVTGCTLSKVDENMKVIPG TEKHFDCDTILLSVGLLPENELTKQAHIEMDPKTKGAIVSDRLMTNVDGVFAAGNVLHVH DLVDYVTEESELAAKNAADYIKDKFQKSQTDPIYLKAGDGISYTLPQYINPDTMQDEAII RFRVNNVYQNRVLKMYVDGKEVTKKRKLVYAPGEMENLILKKKDIDENAKEIEIKLEEI >gi|325481101|gb|AEXN01000014.1| GENE 56 47554 - 48258 834 234 aa, chain - ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 1 234 263 498 498 213 49.0 2e-55 MFNLPTEKGKGILVTPTIDENTLVGPTSDFIDDKHDRRSTREHLEEVVEKSNHTVKNVPV RMVITSFSGNRAHEVGGDFILKESLDGFFDCVGIESPGLTSAPAIGEYMANLVNEKLNLE ENKDFTYDRKPTPKTSELSLEEHDELIKKDKRYGKIICRCESITEGEIVDAINRPLGART VDGVKRRVRATAGRCQGGFCLPRVMEIIARETGVNYDDVVKNGKDSYYIKGHVK >gi|325481101|gb|AEXN01000014.1| GENE 57 48387 - 48974 699 195 aa, chain - ## HITS:1 COG:CAC1322 KEGG:ns NR:ns ## COG: CAC1322 COG0579 # Protein_GI_number: 15894602 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Clostridium acetobutylicum # 1 180 1 180 475 157 48.0 1e-38 MFDAIIIGAGVTGTSVAYQLSKRKGNFLVLEKNEDVCTETSKANSAICHGGYDAKPGTMK AKMNVKGNHMMEEEAKKLSFLYKKIGTFVLCHSEEDIPKLQALYDQGIENGVSGMEILKR DKILEMEPNITDDVVAALYSKEAGIVDPFLMNIAFAEVSNINGVDYKFNEKVVKTEKKMV IGKLLLKIIHIKQRP >gi|325481101|gb|AEXN01000014.1| GENE 58 49104 - 50609 1984 501 aa, chain - ## HITS:1 COG:ECs4851 KEGG:ns NR:ns ## COG: ECs4851 COG0554 # Protein_GI_number: 15834105 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Escherichia coli O157:H7 # 3 500 5 502 502 668 63.0 0 MTKYIMALDAGTTSNRAILFNKKGEIMSVAQKEFTQFFPHPGWVEHDATEIWSTQLGVCT EAIAKLGIEAKDIEAIGITNQRETTIVWEKATGKPVYNAIVWQCRRTADMADKLVEDGYR ETIQNKTGLVVDPYFSATKIRWILDHIENGQERAENGELLFGTVDTWLIYNLTRGKVHVT DYTNASRTMIFNIHTLEWDDELLEILNIPKCMLPEVKPSSCVYGNTFAGYFDGEIPIAGI AGDQQAALFGQTCFNKGDAKNTYGTGAFLLMNTGEEAVKSDNGLVTTIAWGLEEGKVNYA LEGSIFVAGSAIQWLRDQLRIVDAADDTEYMATKVDDTNGCYVVPAFTGLGAPYWDAYAR GAIVGITRGTSKYHIVRATLESLAYLTNDVLDAMAKDSGAPLKELKVDGGASANNFLMQF QADMIQTKVERPQTLETTALGACYLAGLAVGFYKDLEEIKENRLVDKEFNPEISVEERDK KDRNWQRAMQRAFGWANHFEE >gi|325481101|gb|AEXN01000014.1| GENE 59 50621 - 51193 573 190 aa, chain - ## HITS:1 COG:ECs3623 KEGG:ns NR:ns ## COG: ECs3623 COG1954 # Protein_GI_number: 15832877 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Escherichia coli O157:H7 # 4 190 3 186 191 149 41.0 3e-36 MIDIIDLLLENPCIMAIKDNTDLKECLKDEYENNKVVFVLYGSIESIPAIVEKLKDRDKV VFIHEDLIEGLSSSSLSSSFIKKYTNADGIITTRSQNAAYARRIGLLAILRFFVLDSLSY NNVKETLKKANCDLVEILPGIMPKILDDIEKRTSIPLIAGGLVRDKKDVFDALNSKAVAV SSSNYNVWKM >gi|325481101|gb|AEXN01000014.1| GENE 60 51360 - 51968 708 202 aa, chain - ## HITS:1 COG:BH3716 KEGG:ns NR:ns ## COG: BH3716 COG2148 # Protein_GI_number: 15616278 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Bacillus halodurans # 6 194 5 192 207 177 47.0 1e-44 MYENHIKFILDKILAVFALIFLSPIILITAIIIKIKEPKAPILFIQERSGRNRKPFRCYK FRSMRTTAPQNASTWELEHPENYITPFGSFIRKTSIDEIPQIYNILKGDMSFVGPRPVIL KEEKLLDLREEYGACEVKPGITGLAQISGRDDLPPRQKAKMDGLYAKNINFVDDIKLFLK TIPAVIFGEGIREGKRSEEDFK >gi|325481101|gb|AEXN01000014.1| GENE 61 52001 - 52708 864 235 aa, chain - ## HITS:1 COG:SA1574 KEGG:ns NR:ns ## COG: SA1574 COG1187 # Protein_GI_number: 15927330 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Staphylococcus aureus N315 # 3 228 1 224 231 166 40.0 4e-41 MIMRVDKMIGNANLDTRKNIKRNAKKGELIINGQIVKDSSVKVDPNLDEVIYMGELVDYF DNIYIMMNKREGLICQSNELDGTVMSDLDEFYLNLDLAIAGRLDKDTTGLLLLSTDGKFI HKVISPNSHIWKKYEVETSKKIDPSLVEIFKDGVYIKEDDYYARSAKLDIIGGKKAYVYV TEGKFHLVKRLFSNNDNEVIKLKRLAIGDLELDQSLNPGQYRELIEEEKNLFIKD >gi|325481101|gb|AEXN01000014.1| GENE 62 52689 - 53024 343 111 aa, chain - ## HITS:1 COG:CAP0153 KEGG:ns NR:ns ## COG: CAP0153 COG1695 # Protein_GI_number: 15004856 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 2 102 4 105 115 87 50.0 6e-18 MKSQMLKGVIEGVILKIIKDKETYGYEIVETLRLNGFYNMTESTVYPILQRLSKKGLIFS SKEKSKVGPKRKYYYITPKGEEYLIDFSKDFLELEENVRNILGVKNDNESR >gi|325481101|gb|AEXN01000014.1| GENE 63 53065 - 55647 2143 860 aa, chain - ## HITS:1 COG:FN0524 KEGG:ns NR:ns ## COG: FN0524 COG0210 # Protein_GI_number: 19703859 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 2 857 4 915 919 254 29.0 7e-67 MINKKQNLIVDDSKYPAAVLAGPGTGKTFTIVQKIISLIKNEGLSPNKILVTTFTKKAAN ELIERVESGLKKENIKADTSNMLIGNFHSLALSFLKEYRAFSNKIFEPFVIDSNIEGYLL EKNMDIFRKIPNFNDLISYNEVGQIMGIFSNITNNLIDLNKLRNSSNAKDSLALEVYLKW ADFLDRNNLINYQLILKNFYDLLEDPIFGKKIRDRIDFVIIDEYQDTNKIQEEIAFNLCK GKNLMVFGDDDQALYSFRGASPRNLREFDKACKKKMKADAKFYELDINYRSNQEIIDKSR DFLVKSQAFDEEKIKNLQANEKNKNENSVVRARANNYENIEKIVKFLNKKINLNQIAFLF PSLNSDYPKSLQTYFENHGINVLNKSSKLFFKRREIRLCLYVLLSIFSKKPKKLTGSSPD KYKWVQETNFKKYIGGIFDNKEFVKDEKLNAFINEEKLSLAQNKSYTDILYRAFGLDIFR KILGQKMDDLNQIRELSNIGKFTSILSDFINLQGDNINYYEKSVDLIYGYIFYLFKNSSI SEFENFDVPKDSVIFSTIHQAKGLEYDVVFVSSLYDKPRKDREAFSPQIDVKNKSDYLKN YYRKYYTAFTRAKNLLVLLDNCQDQSMINFSQALNSSSNLNSIDFKFKKDQVKKEILAYT TDISLYDACPLKYKFIRLLNYRKEKTRALDFGSKVHSLSEYLTNLKKENLSLEKINDFIR ENKEFQSPIENFVNRDFPIKNSEMNIKLDRKDYILQGNIDIVLENGSIIDIKTGKINNLS SYKNQLLTYYNLLVYNNKKVDRMFLYFIEEDELIEVEKSNFDMEYIDRIGKNIVEKNIEI RTEDKSKCRYCPMAYFCKRT >gi|325481101|gb|AEXN01000014.1| GENE 64 55644 - 56147 615 167 aa, chain - ## HITS:1 COG:SP1464 KEGG:ns NR:ns ## COG: SP1464 COG0454 # Protein_GI_number: 15901314 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 152 3 153 164 99 37.0 4e-21 MRIAEIKDLDEIMIIINDGKKALKKDGIDQWQNGLPDREGICENIMTGESFVYEEDGEIL SFAYLKKAYEEDYREIENNFKKHGPYLTIHRLSVKESAKKRGVAKKFFDQIISYGKDLEM DAIRIDTHPDNFKMQNLIKKFSFEKVGICTVDDKIRRSKRYVYELVL >gi|325481101|gb|AEXN01000014.1| GENE 65 56230 - 57081 1347 283 aa, chain - ## HITS:1 COG:ECs0199 KEGG:ns NR:ns ## COG: ECs0199 COG1464 # Protein_GI_number: 15829453 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Escherichia coli O157:H7 # 34 276 26 267 271 182 46.0 8e-46 MKKLGKIALGLALLVGFSSCGNKDNKNEANSNSNTKEKQTIKIGVVGEYNDVLNEVSKRY EEKTGNKVELVVFSDYNQPNEALESGDIDLNAYQHKKYLEEYNKDHKTDLVSIGNTMLAP LGIYSKKYKSLDEVKDNDEVVIPNDASNGARALFLLQDAGLIKVNGKKGDSITVTDVKEN PKNLKITEVDASQTARNLDSAALAVVNDTFALDSKIATEYPALKFEDSKPTDDNPYVNII VAKKDRKDDKVLNDFVKNYYQTEETEKDYKKFTGGAWIPAWEK >gi|325481101|gb|AEXN01000014.1| GENE 66 57108 - 57980 1298 290 aa, chain - ## HITS:1 COG:SMc03157 KEGG:ns NR:ns ## COG: SMc03157 COG1464 # Protein_GI_number: 15966641 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Sinorhizobium meliloti # 44 289 18 258 258 190 44.0 2e-48 MKKITKIALGLGLVLSLTACGNKKDDTNSNSNASNQAKTEDRFADAKEIKIGVCGEKNEV LEDIAKRFEKDTGKKIKIVSFSDYNQPNEALKAGDIDLNAFQHKKFLEDYNKSHKTDIVA VGDTLLAPMGIYSDKIKDVKEIKDGDKIAIPNDPTNGARALFLLQSAGLIEVDGKEGDAI TVADIKKNPKNLEIIELDASQTARNLTEVAASVINSGVAVDAGFVPTEDAIYLEDKDDPA KAIYVNIIAARKEDKDSKTVENFIKNYYQTDETKKLVEKETKGSEIPAWK >gi|325481101|gb|AEXN01000014.1| GENE 67 57994 - 58659 900 221 aa, chain - ## HITS:1 COG:SP0152 KEGG:ns NR:ns ## COG: SP0152 COG2011 # Protein_GI_number: 15900090 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 18 221 27 229 230 176 59.0 4e-44 MGYFDYALSIKDRIFEDIGLTFYMLILSAIFSGIFGLVIGVILVVTNEGGILENKKVYSI LDKITNLFRAIPFIILLAVISPLTNFIVGTRIGPTAAIVPLVFSCVPFFAKQVEQALAEV DPGVIEAAEAMGNSPFEIITAVYLREGLPSLIRASSITLISLLGLTAMAGTIGAGGIGNL AIAVGYNRYKNDVVIISVIVILIIVYAIQGLANLLIKKTSH >gi|325481101|gb|AEXN01000014.1| GENE 68 58646 - 59674 1305 342 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 335 5 350 354 329 51.0 5e-90 MIELKNISVDFDGFKAVDGVNLKIEKADAFGIVGFSGAGKSTLVRCINLLQKPTNGEVLI KGENLLDLSQKDLRQRRKKIGMIFQHFNLLNNISVIDNVIFPIRKDNISKEEKIKKAKKL LDLVGIGDKADSFPRELSGGQKQRCAIARALASDPEILLCDEATSALDPKTTKQILKLLG EIKEKIGLTIVIITHQMEVVKDLCNKVAVMQDGKVIEEGTTLEIFSNPRHRLTKDFVETS TNVNQTLEEVKNNLGVLKKDEFLVKLSYVGASTTEPVINEIYEKFKVKTNVLAGNIEFIT NVPVGNLIVTFKAEKENIDKAIEYLVAGGTNVELLGDSNGIL >gi|325481101|gb|AEXN01000014.1| GENE 69 59667 - 60806 1562 379 aa, chain - ## HITS:1 COG:PH1043 KEGG:ns NR:ns ## COG: PH1043 COG1473 # Protein_GI_number: 14590880 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus horikoshii # 2 362 24 375 387 220 38.0 3e-57 MHENPELSSKEFETRKFLIDQCKKLGLEIQEVKNSTGFVAILDTKKDGKILGLRTDIDAL PILENDQNLKRKKEVVSKNPGVMHACGHDFHMALALTSAKILSKIKDKLDGKFYFIFEEG EETGAGIHAMVDHLKDIKFDAIYGNHVNTELETGKIAISKGRVYAGCAGVDFDVIGKGGH GSRPDLLNSPINALVAIINNLNQTWATNLDPNEIVTLGIGSINAGFASNVIPDKANLKAT LRFFKDEVGENALEKLKSVAEKTANLYDCKIKFNDYTRVVAYPVKNDEKLADFARKSLNE ILPDALVDQEVSYGGESFYGYAKICPTVFAKIGIKNEKEGYGAGAHTEKFDVDNEGLYFG LASALNFLINFSRKESNND >gi|325481101|gb|AEXN01000014.1| GENE 70 60815 - 60886 135 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKNISPDEIKALIKENLDFSKK >gi|325481101|gb|AEXN01000014.1| GENE 71 61436 - 63256 2511 606 aa, chain - ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 606 1 608 608 624 53.0 1e-178 MCGIVCYKGNLEARDVIVEGLERLEYRGYDSAGISLIDEGVLSTVKKSGKVKVLKDELSK NPIKGHLGIGHIRWATHGGPSDVNSHPHLSNNGKIAVVHNGIIENYNELKENLKKEGYTF KSETDTEVIAVLIEKFYENDLLDAVRKAKSMLRGSYALGIICQDEDDRLIVLREESPLVL GLTDDGILAASDLPSIIKYTKDVVYLENGDLVDIKGNEYTIYDRENKEVEREVSKVTFSF EDATKEGYDHFMIKEINEQPKAIADTIKYKMTDGLIDFKENAFSKEELEGFNKIYMVACG TAYNAGIVGSYAFEKFAKIPVICDIASEFRYNDPFIDDKTLIILPSQSGETADTLAALRL AREKGAKTLVLTNVVASSLDREADKTIYCYAGPEIAVASTKAYTTQIISFYMLALDFARK LETISEEEYKNILEEIKKIPEKVKEILDDIEDIKKYAQEIKNSESIFYLGRGLDYKSVIE GALKLKEVSYIHSEAFAAGELKHGTIALIEEGTPVVTVATQENIMEKTISNVKEVISRGA NIFSIARSDDHLEDISHYTYKLPETIDALYPVLAVVPQQLLAYYTSDAKGIDVDKPRNLA KSVTVE >gi|325481101|gb|AEXN01000014.1| GENE 72 63589 - 67122 4602 1177 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 5 408 2 406 413 549 64.0 1e-155 MTIKRRKVTMDGNTAAAHVSYAFSEVSAIYPITPSSPMPEFIDKWAANERLNLFGNPVSV TEMQHEAGAAGAVHGSLAAGALTSTYTASQGLLLMIPDMYKIAGERLPAVFHVAARSLST SAINMYGDHQDVMAARATGFAMLAEGSVQEIMDLSPVAHLAAIKGRVPFVNFFDGFRTSH EIQKIDVWDYDQFEDMVDWKAIDDFKNDSLNPHRPTMRGVFEKSGYFQRAEAQNKAYDAI PEIVLSYMEKVNEKIGTNYSLFNYVGADDATDIIVAMGSGTDTIQQTVEELNKEGRKVGL VKVHLYRPFSTKHLLEAIPETVERIAVLDRTKEKGSAGEPLYLDVLEAFSDSDRNPKIIA GRYGLGQKDTRPAHFKSVFDNLAKDKPKNHFTVGINDDVTHTSLEVDDSFVINDGKTTRC IFWGNGGDGTVGANKSAIKIIGDNTDMFAQGYFDYDAKKSNGLTMSHLRFSPNPIHAAYF IDEADFVSCSPQAYVRQYDLVKNLKEGGIFLLNTIWSEDELEEHIPNYLLKEITDKNIKF YTVNASKIAQEVGLGHRTNMVIQTAFFILSEVLPIDDAIKYLKDSIEKSYGMKGQDIVDM NNKAVDRASEELQEIKVKEEWKNLKDDREGENENEPDFIKNMVRPIINLKEDDLPVSTYL PYDDGQYMAGTSRYEKRGIALFVPEWNIDNCIQCNQCSYICPHATIRPFLLDEEQKAKAP EGFETKKAIGKGLEGYEFRIQVSPYDCMGCGNCVDVCPAPKKALAMKPIDEQIEKQADNW EFAHGEVGYRDDEIAPTNVKNSQFSQPLLEFSGACAGCGETPYAKLITQLYGDHQIISNA TGCSSIWGSSVPSMPYCTNKNGEGPAWASSLFEDAAEYGYGMLLATKSNKFLLETLMKKF LELKVSTPLNDAFNEWLENNDDFEQSKKAAIKIESLIANETDNEEANKIIERIKNLKDYL VKKSVWIYGGDGWAYDIGFSGVDHVLASGDDINIIVFDTEVYSNTGGQSSKATPLAAVAK FAASGKKVRKKDLGLMMTTYGYVYVAQVAMGANQAQTLKAIKEAESYHGPSLIIAYAPCI NHGLKAGMGKTQRREKEAVASGYWHLWRFNPLLKEEGKNPFSLDSKDPTESFQEFLQGEV RYASLKKAFPEDADRLYSEAEEAAKERLESYKKMENK >gi|325481101|gb|AEXN01000014.1| GENE 73 67208 - 68431 1539 407 aa, chain - ## HITS:1 COG:Cgl2969 KEGG:ns NR:ns ## COG: Cgl2969 COG1301 # Protein_GI_number: 19554219 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Corynebacterium glutamicum # 6 392 5 385 412 288 47.0 2e-77 MKKLGLLPRLIIAIILGIIIGLVAQKVGALKILVRLLITFNGLFGNFLGFVIPLIIMGFV IPGIADLGDSAGKTLAITAGLAYLSTVVFGTITYFVGSVVLPTFIKKGAISFDPDKNAGH VLKPIFESPMDPVFSVTTALIISFILGVGIAAAKADVLKKAVHEFSDIITKLISSVVIPL LPFHICGIFANMAYQGTVAVVLSVFARVFIMVLILHYLTITTQFTIASSMAGGNPFSKIK TMIPAYMTAIGTQSSAATIPVTLNQTYKLGVNKGIADFVIPLCATIHLSGSTITLTSCSL SILMLNGSDVGFQHMFPFILMLGVTMVAAPGVPGGAVMAALGILQSMLGFTEPMTALIIA LYVAQDSFGTACNITGDAAIACVVNKISGFKLDPQANAEYIDELVKQ >gi|325481101|gb|AEXN01000014.1| GENE 74 68857 - 70473 1597 538 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 527 3 529 547 619 60 1e-176 MAKDIAYGKSARDGLERGIDKLANAVKVTLGPKGRNVVLDKSYGAPTITNDGVTIAQEIE LEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIKEGLKNLAAGANPVVLNKGLR KASNEVVSYIKESSKEVEDKKAIEQVGTISSADPEIGKFIADAMEKVGNDGVITVEESKT TDTYLDVVEGMQFDKGYLSPYMATDNEKMVADLDDPYILVTDKKISNIQEILPLLEEIVQ SSKPLLIIADDVDGEALTTLVLNKLRGTFNVVAVKAPGYGDRRKEMLEDIAILTGSKVIS EDLSMELKEATIEDLGSAKKVKVDKDHTVIVEGKGDKDALAERVEKIKGQIEASDSEYDK EKFQERVAKLAGGVAVINVGAATETEMQDKKYRIEDALSATRAAVEEGIVAGGGTVLIEA IKKVEALEEKLENDEKTGAKIIAKALEAPLRQIVENAGMDGSVVLENVKKSDKNTGYDAY DDEYVNMFEKGIVEPTKVTRSALENATSIASMILTTEAAVADIPEEKPEMPPQMPMGY >gi|325481101|gb|AEXN01000014.1| GENE 75 70483 - 70764 535 93 aa, chain - ## HITS:1 COG:BH0561 KEGG:ns NR:ns ## COG: BH0561 COG0234 # Protein_GI_number: 15613124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Bacillus halodurans # 3 92 2 93 94 84 52.0 4e-17 MNLKPIGERVVIKKLEAEKKTQSGIVLPESAQEKPQYAEVVAISNDILNDQDKKDSLKEG DKVIYSQYAGTDVKIDGENYVVLAYKDVLAVVE >gi|325481101|gb|AEXN01000014.1| GENE 76 70848 - 71753 969 301 aa, chain - ## HITS:1 COG:CAC2707 KEGG:ns NR:ns ## COG: CAC2707 COG0122 # Protein_GI_number: 15895964 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Clostridium acetobutylicum # 14 299 6 290 292 229 43.0 7e-60 MNRYIEENKNKLNIKEEKGQLIFYHESFDPKDIFTCGQCFNFFEEEDGSFTAVFLGKIIN LKKEGDKIIIDNVSEEEFYDIFYDYFDLGVDYGKIKEKISVDETLKKATEYGTGIRILNQ EFFETLISFIISANNQIPRIKKAVRIISEMYGDYLGEYRGRKYYSFPSAEKLSKARPEDL REKARVGFRDKRIVQTAKIINDGFFDFEKDIKMPTEDLRKKLQELPGVGPKVADCILLFA FHKRETFPVDVWIKRVMEFLFIKEEVPKKQISAYADKYFGENAGYVQQYLFYYGRENAIG K >gi|325481101|gb|AEXN01000014.1| GENE 77 71762 - 72526 761 254 aa, chain - ## HITS:1 COG:BH3294 KEGG:ns NR:ns ## COG: BH3294 COG4509 # Protein_GI_number: 15615856 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 8 250 10 248 254 105 31.0 6e-23 MKDKLLKLIRIILVIIIIVCLGILGRRGYDYYVNYKNNQHISRIVDEVSDVDGKDDTSSE EKFHNLEKKYMKILKKLQNENSDVKAFMEIPGTYIAYPIMQANDNSFYLRKGINKKYDIA GSIFMDYMNDSKVDDANTVIYGHHLDIESMFTGLDGYRKNDFAQNHRTIYLVTNEGLREY QVFSAYGIPSEYDYRTLDFEDSEEKIKYFNKLKANSENELKTRDFKESDTIITLSTCQYD YKDQRLAVHALRVR >gi|325481101|gb|AEXN01000014.1| GENE 78 72608 - 72835 309 75 aa, chain + ## HITS:1 COG:no KEGG:Apre_1387 NR:ns ## KEGG: Apre_1387 # Name: not_defined # Def: glutaredoxin # Organism: A.prevotii # Pathway: not_defined # 1 74 1 74 77 114 70.0 2e-24 MSDYKLFVGSFCPHCRKVENFLDENDIKIDIVNINEDRDAMMELIQKGGKRQVPCLFHDG EYMYESNDIIEFLQK >gi|325481101|gb|AEXN01000014.1| GENE 79 72965 - 73780 1096 271 aa, chain + ## HITS:1 COG:SA0517 KEGG:ns NR:ns ## COG: SA0517 COG0561 # Protein_GI_number: 15926237 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Staphylococcus aureus N315 # 1 271 1 287 289 120 31.0 2e-27 MIKLIATDCDETLLSNDKTIHPRNIEAIKKAQQMGIIITTATGRGPYQLFDILEQIDNVK EDRFSVLCNGGIIMDNVTKKIVHSSPIHYKKAVEVANYCREIGVHFQIYTDKHCYIFANG NEVSGNYDKNVYKFVQNVEDIEDLDKEIIIKVIIKNSNLNYLMSLEEDIARICDWDVAIS YSSDTFMEINKKNVNKAKALEILCDHYKIKMENVLTIGDNYNDKEMLEEAGYSAAVQNAH LLLKDIAKYTTKATNDQGAVGEAIEKFVLNQ >gi|325481101|gb|AEXN01000014.1| GENE 80 73821 - 74054 235 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325846906|ref|ZP_08169763.1| ## NR: gi|325846906|ref|ZP_08169763.1| hypothetical protein HMPREF9246_0970 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0970 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 77 1 77 77 72 100.0 1e-11 MNDKNKIVKIILTILGLILGFKIIKVLFSIVFALFIPILICGGFIIFPILFLLIPLGIIG AIAYLIYKFFVKEKSVW >gi|325481101|gb|AEXN01000014.1| GENE 81 74066 - 74239 243 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNDQARNVLRVLLMALFAVIVLKLLGLAINIVVSIVIPVLLIYFLYKVLIKKEDIFK >gi|325481101|gb|AEXN01000014.1| GENE 82 74374 - 75039 515 221 aa, chain - ## HITS:1 COG:no KEGG:Apre_1390 NR:ns ## KEGG: Apre_1390 # Name: not_defined # Def: aldose 1-epimerase # Organism: A.prevotii # Pathway: not_defined # 3 221 13 234 235 139 36.0 8e-32 MTVNSYGAYIEKFSKNNKPIFFPKLILKIKGDLKTRGGMHPCLPNFGKSDIKNLDQHGFG RNSFWYVENRGENFIDLKLDGKGEYENSLYKIRYQLEDSSLFLYLEIINKSKKDLEIAPG FHPYFYIDKNSKIKGLDLENIRLEDTYFLKGKKAYLKSKYFNISIENENFKEFAVWTDFN GDYLCLEPCYNGPSFSKEINNPYILKSCKTFKENIKISIED >gi|325481101|gb|AEXN01000014.1| GENE 83 75125 - 75610 853 161 aa, chain - ## HITS:1 COG:BH1124 KEGG:ns NR:ns ## COG: BH1124 COG1528 # Protein_GI_number: 15613687 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Bacillus halodurans # 1 160 2 161 169 115 38.0 3e-26 MSEKLLEMLNDQMNFELQSAYEYKAMQIYADDEEFEGFAHWFGQQVREEIEHAEKMTKFL QEVGFKPVYKAMEAPNEEFEDLLDVTKKALDHEKEVTRRIHEIAKAAREAGDERVISFIQ SFVDEQVEEEDTFGKLVTRLKRINGNYGGLYILDGQLAHRG >gi|325481101|gb|AEXN01000014.1| GENE 84 75603 - 75899 455 98 aa, chain - ## HITS:1 COG:no KEGG:Apre_1392 NR:ns ## KEGG: Apre_1392 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 92 1 94 100 63 41.0 2e-09 MADVLLIKNLNEDQLNNIIPVTIKTNISDRDKLVGIFNCLIDEKLVETNRLAIKKSSITI DLISSKITEVIQKLIDNGCMIYGVYILYDDYLGGKYNE >gi|325481101|gb|AEXN01000014.1| GENE 85 75949 - 76578 606 209 aa, chain - ## HITS:1 COG:CAC1577 KEGG:ns NR:ns ## COG: CAC1577 COG1636 # Protein_GI_number: 15894855 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 206 1 208 208 196 54.0 3e-50 MVKINYNLKMEEIIKNIKKEGKKPRLLLQVCCAPCSSSVLTRLREDFDIDIFYYNPNIYP ANELEKRVETVRELVNDMDLDARVIFPENSPNDFYEYVSDRKNDHEGGESCYKCYELRLE KSAIYAKKNSYDYFTTTLSISPYKNSAWLNEIGKNLEEKYGIKYLYSDFKKKNGYKDSID LSKKYKLYRQDYCGCVFSYREMEEKKNLK >gi|325481101|gb|AEXN01000014.1| GENE 86 76587 - 77153 560 188 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 7 179 4 167 176 102 43.0 4e-22 MGVIMLLNLFISFFKVGLFSFGGGYAALPLIQEEVVNANSWLGISEFNNLITISQMTPGP IAINSASFVGMRVFGIWGAIVASLGCIMPSFIIVGSISYFYSKYRNLDTMQGVLGFLRPA VVSMILAAGIDILKTAFFDINKVSLGNIDFSMVILFILMLILIRKSKIDPIILMIGSGFI YLFIHLFI >gi|325481101|gb|AEXN01000014.1| GENE 87 77131 - 77688 535 185 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 1 176 1 175 186 89 36.0 5e-18 MDFKKLFKLFLHTLYLSAFTFGGGYVILSLMDTTFVKKLGWINKEEMLDMTAIAQSSPGA VAINASISVGYKIFGFIGAFVATLGTVIPPLIIISVISYFYDAFISNRYIALILKGMQAG VGALIINVVIDMTKEVIVGRGFLIYGIFIISFILNVFLHVNIIYIILGLIIFGIIYSFYG GNHAS >gi|325481101|gb|AEXN01000014.1| GENE 88 77858 - 78250 510 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228004193|ref|ZP_04051172.1| SSU ribosomal protein S9P [Anaerococcus prevotii DSM 20548] # 1 130 1 129 129 201 80 1e-50 MADIIYQATGRRKTSVARVTMRPGSGEIKVNGRDLDDYFSYDTLKIIAKAPLKLTENESN YDIKVNVQGGGFNGQAGAIRHAIARVLLEVNPDYRQALKRAGFLTRDPRKKERYKYGQKK ARKSSQFSKR >gi|325481101|gb|AEXN01000014.1| GENE 89 78263 - 78703 582 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485332|ref|ZP_03915648.1| ribosomal protein L13 [Anaerococcus lactolyticus ATCC 51172] # 1 146 1 146 146 228 76 6e-59 MKNQKTYVPTKSTIEPKWYVVDATDMVLGRLASQVAAIIRGKHKPTFTPNMDTGDYVIVV NAEKVVLTGNKEYQKEYKRYSGYAGGLKTISYKDMMDKHPERIVEHAVIGMLPHNKLGRQ MAKKLRVYVGENHDHQAQNPEVLDLK >gi|325481101|gb|AEXN01000014.1| GENE 90 78875 - 79618 899 247 aa, chain - ## HITS:1 COG:lin1165 KEGG:ns NR:ns ## COG: lin1165 COG4822 # Protein_GI_number: 16800234 # Func_class: H Coenzyme transport and metabolism # Function: Cobalamin biosynthesis protein CbiK, Co2+ chelatase # Organism: Listeria innocua # 1 223 1 228 261 73 24.0 3e-13 MTFATIIVNHGTSKVENQKEAIGFFKKKVEEKYKDSLVKSYMASDKIRKKVDDKDLCQDL DEILSECRKKNIKDVRFLMAYVLRGIEYEKVMKKAEQLNEDGFFTFTFTKALLEEENNDE ILDFLEELGENDPSLVIFHGSPRKNLEEFEKFQEKIKNSDKNLYFSSFEDRKFDDLIKEF KEKNISKIRVIPFLIIVGNHVAKDIEGDKKNSYKKVFEENEIEINLVKKSLLLYDKIAGI FVEKLEK >gi|325481101|gb|AEXN01000014.1| GENE 91 79620 - 80426 1217 268 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 260 4 263 265 305 60.0 6e-83 MRKALTIAGSDCSGGAGIQADLKTMTLNGVYAQSAITALTAQNTTGVSNILDVDENFFKD QLDMIFDDIYPDAIKIGMVSNSSLISVIAKELKERKAKNIVIDPVMVSTSGSKLLKDEAI DSLKKELLPLADLLTPNIPEAEILSDMKIKTVDDMKKSAKIISDKFKCATLLKGGHSLND ANDYLFEDGRGIWFKGKRINNPNTHGTGCTLSSAIAANLAKGFNMENSIKMAKEYLSNAL LDMLDLGKGSGPMNHAFDIKEKYKKLGD >gi|325481101|gb|AEXN01000014.1| GENE 92 80570 - 81253 802 227 aa, chain + ## HITS:1 COG:AF1248 KEGG:ns NR:ns ## COG: AF1248 COG1811 # Protein_GI_number: 11498847 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Archaeoglobus fulgidus # 3 214 4 213 228 127 39.0 2e-29 MLAVFVNFILVGILGFLGSKIGNKFSESLRNSIMNFLAAAIIVIGIRSSMKGDILVIIIS VVLGLIIGEFLGLDKKLDNLSSFIEKKYIKDSNTNFSESFLNASILFCFGAMGIIGCIEA GVTGNDQVLMGKALIDGVVAFFMAQSMGIGVSFSSFSILIFQALLVLLAGFLSPILGEEV INNISGTGGLTIIVIGLSQLKLVDSKIANILPALAIPVIYGLISGLF >gi|325481101|gb|AEXN01000014.1| GENE 93 81310 - 82035 273 241 aa, chain - ## HITS:1 COG:CAC3472_1 KEGG:ns NR:ns ## COG: CAC3472_1 COG1396 # Protein_GI_number: 15896711 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 11 103 5 95 125 60 38.0 3e-09 MKEINKKDFGEFVCKKRKEKNMTQKDIAEKLYVSVQAVSKWERGKSLPDISLLMPLAKIL DVKLVNLLESKEEKAEDSQKIENLLEKIVEINKEDEIYKRKEKIKRAVFLAFAFIFIGIE YYFLYRIFKYDINNFLTIGILGVIFSIYLYLLIDERLPSYYDENKISFVSKGFFRINVVG VNFSNKNWKPILKFLRIWIIGSMVIFPIIFNFENSIHLILSTILFFSSLYLPLYGIGKYY E >gi|325481101|gb|AEXN01000014.1| GENE 94 82202 - 83662 1365 486 aa, chain - ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 1 481 1 480 483 373 46.0 1e-103 MNLKIVKYSLGKLLLVLAGLLTFPLLVALIYRESLEDIRNFVIPIIISLVLGIILSKRGD NRSHLYTKEAMFITASTWVLFLLIGAIPLFLTKSNYNGYIDALFEMVSGFTTSGASVALN VELLPHSIIFWRSLSHFVGGMGILVFTLAILPNSNKESSLLMKSEVPGPTFGKITPKLSD TARNLYGMYIVLTIITVILLLFGGMNLFESVIHAFGAAGTGGFSNKGISIGAYDSRYIEV VLAVMMAVFGVNFNIYFYAVTKNVREAVKSEELKWYIAIILISSALIFSNIVSIYKNTIY SLVNSIFTVSSIITTTGYVSADFGSWPLFSKSVIIMLMFIGGCAGSTAGGLKVSRFVILV KGGINQIKESMNPKKITINRLDGKKVDNETERSVSKYLVIYILIFIVLFMIVSIDMNDFE TAFAAVSTTFNNVGPGLGAFGPITTFEQMSKLSKFVLTIAMLLGRLEIFPMLLILYPSTY RNLRNK >gi|325481101|gb|AEXN01000014.1| GENE 95 83665 - 85032 1705 455 aa, chain - ## HITS:1 COG:FN0242 KEGG:ns NR:ns ## COG: FN0242 COG0569 # Protein_GI_number: 19703587 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Fusobacterium nucleatum # 1 455 1 451 452 293 40.0 5e-79 MNVIIVGAGKVGSYLTSQLSDEGHNILVIEKNKDVLERLLASNDVMGILGDGRDLDVLEE ANVDECDAFIAMTFNDDVNLISSMIAKKKGAKSTIVRLRDPRYIKDDEFMRKTMGVDRLV NPEFSAAKEIQRTLKYTYAVNVENFLDSKVILIELEIDENSKLKNKSLMEVNSEGLLGNT IIVIGEKDDQVVIPNGNHILEVGEKIYVAGPREDIDIFYKKQVDDRKNIKNVLIVGGGAI ALYLSRLLLKRNFKVTVLENNKERAMDFSENLPDCDVINADGTDPEILDEVRIENYDAVV ALTGIDEENILISLLAKKRGIDKIIAKVNRTQLLKITGILDVDTTVTPKKSASFFVSRLL RSKENSRGESISNLFRLSDDRVEAIDFTVIENSKVTGKKLKDLNVKSNTLIVGISRDSLG GKIEVANGESTIELGDRVMVVTKQKDFKEIDDILE >gi|325481101|gb|AEXN01000014.1| GENE 96 85166 - 86368 1816 400 aa, chain - ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 2 399 1 392 393 341 45.0 2e-93 MVKDRIKKVILDNEESMIDFRRKMHENPELSMKEFETSKFIASFLDEMGISYRFANPTGI IGEIKGKSDKKTVLLRADIDALPILETNDVSYKSKNEGISHACGHDTHSAMLLTALKALN EVKDELDGNVRFVFQPGEETGEGSKAMVKDGLLDGVDNAFGAHIFTSFDSGVLGATYGQT FAANDFFNIHFKGLTSHGSTPQKGVDAMVMAATFILNSQAIISREIDLAEEPVVLTFGKI HGGEVANSICGDVYIEAGFRAFTQDSVDFVEKRLTEYANQVAKMYRGEVEIDFNLGAAPV VIDENSGKLTQKVAAEIVGEENVDKDIRFSGSEDFGLYLTGYDEVKGVKGSFGMIGARNS DPKTHNFNHASDFNVDESVLKNGAMMYALYAYEYLIQDEF >gi|325481101|gb|AEXN01000014.1| GENE 97 86896 - 86958 59 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPRGGIEPPTRGFSVPCSTD >gi|325481101|gb|AEXN01000014.1| GENE 98 87045 - 87203 296 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGHQYMERYRSGHNGAVLKTVRVLRLTRVRIPSSPPNKKSQYNDFLEKYSSG >gi|325481101|gb|AEXN01000014.1| GENE 99 87341 - 87514 258 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLGYSQVGKAPDFDSGMRRFESCYPSQFDPLAQSVEHLTFNQGVRSSNLRWVTINII >gi|325481101|gb|AEXN01000014.1| GENE 100 87434 - 87841 261 135 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGIAGLEPTHTRVKVWCLTDLAISQHGAPGRSRTSDTRIRSPLLYPAELQALMERVKGI GPSQPAWKAGALPLSYTRKLVGKSGFEPLKAKLTDLQSVPFGQLWNFPKICISCNKNIAN IQFYILNKIGADDRT Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:39:27 2011 Seq name: gi|325480958|gb|AEXN01000015.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00031, whole genome shotgun sequence Length of sequence - 142214 bp Number of predicted genes - 144, with homology - 143 Number of transcription units - 50, operones - 37 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 704 797 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 2 1 Op 2 . - CDS 727 - 891 169 ## gi|212696924|ref|ZP_03305052.1| hypothetical protein ANHYDRO_01487 - Prom 1028 - 1087 13.0 - Term 1056 - 1097 7.1 3 2 Op 1 . - CDS 1105 - 4137 3420 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 4 2 Op 2 . - CDS 4182 - 5279 1360 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 5 2 Op 3 6/0.000 - CDS 5269 - 6327 1552 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 6 2 Op 4 12/0.000 - CDS 6338 - 7351 1014 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 7 2 Op 5 32/0.000 - CDS 7361 - 8137 837 ## COG0575 CDP-diglyceride synthetase 8 2 Op 6 . - CDS 8124 - 8828 774 ## COG0020 Undecaprenyl pyrophosphate synthase - Prom 9030 - 9089 17.9 + Prom 8893 - 8952 10.4 9 3 Op 1 . + CDS 9101 - 9850 874 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 10 3 Op 2 . + CDS 9852 - 11381 1499 ## COG0606 Predicted ATPase with chaperone activity 11 3 Op 3 . + CDS 11381 - 12565 1051 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 12 3 Op 4 1/0.143 + CDS 12574 - 13983 2005 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 13 3 Op 5 . + CDS 13983 - 15425 1399 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 15430 - 15460 1.2 - Term 15418 - 15448 2.0 14 4 Op 1 7/0.000 - CDS 15453 - 16562 1301 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 15 4 Op 2 . - CDS 16552 - 17478 899 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 16 4 Op 3 . - CDS 17463 - 17633 180 ## Apre_0565 aminotransferase class V 17 4 Op 4 . - CDS 17676 - 17897 395 ## COG4443 Uncharacterized protein conserved in bacteria 18 4 Op 5 . - CDS 17906 - 18337 405 ## gi|325847085|ref|ZP_08169911.1| hypothetical protein HMPREF9246_1082 - Prom 18389 - 18448 8.8 19 5 Op 1 . - CDS 18455 - 18940 437 ## COG0225 Peptide methionine sulfoxide reductase 20 5 Op 2 12/0.000 - CDS 18937 - 19413 554 ## COG3610 Uncharacterized conserved protein 21 5 Op 3 . - CDS 19423 - 20193 1024 ## COG2966 Uncharacterized conserved protein - Term 20208 - 20248 4.3 22 6 Op 1 . - CDS 20262 - 21026 786 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 23 6 Op 2 . - CDS 21077 - 22846 219 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 22867 - 22926 6.5 + Prom 22876 - 22935 9.5 24 7 Op 1 5/0.048 + CDS 22957 - 23799 1115 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 25 7 Op 2 . + CDS 23786 - 25177 2127 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 25189 - 25229 7.2 - Term 25238 - 25287 3.2 26 8 Op 1 1/0.143 - CDS 25299 - 27605 2821 ## COG1511 Predicted membrane protein 27 8 Op 2 . - CDS 27615 - 29669 2296 ## COG1033 Predicted exporters of the RND superfamily 28 8 Op 3 . - CDS 29669 - 30259 741 ## Apre_0547 transcriptional regulator, TetR family - Prom 30309 - 30368 6.7 29 9 Op 1 . - CDS 30398 - 31069 605 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 31089 - 31148 3.0 30 9 Op 2 . - CDS 31221 - 31796 605 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - Prom 31828 - 31887 12.5 + Prom 31707 - 31766 16.1 31 10 Tu 1 . + CDS 31886 - 32737 1390 ## COG0214 Pyridoxine biosynthesis enzyme 32 11 Tu 1 . - CDS 32800 - 33639 935 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 33776 - 33835 7.5 + Prom 33580 - 33639 9.0 33 12 Tu 1 . + CDS 33692 - 34420 248 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 34473 - 34519 6.2 - Term 34302 - 34343 -0.2 34 13 Op 1 . - CDS 34401 - 34715 332 ## Apre_0523 UvrD/REP helicase 35 13 Op 2 . - CDS 34730 - 37795 3109 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 36 13 Op 3 . - CDS 37788 - 38147 290 ## Apre_0522 ATP-dependent nuclease subunit B-like protein 37 13 Op 4 . - CDS 38144 - 41146 2699 ## COG3857 ATP-dependent nuclease, subunit B 38 13 Op 5 28/0.000 - CDS 41143 - 44205 3170 ## COG0419 ATPase involved in DNA repair 39 13 Op 6 . - CDS 44202 - 45296 935 ## COG0420 DNA repair exonuclease 40 13 Op 7 . - CDS 45296 - 46015 697 ## COG3022 Uncharacterized protein conserved in bacteria 41 13 Op 8 42/0.000 - CDS 46089 - 46883 926 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 42 13 Op 9 25/0.000 - CDS 46876 - 47541 254 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 43 13 Op 10 . - CDS 47542 - 48681 1546 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 48744 - 48803 9.4 + Prom 48669 - 48728 7.8 44 14 Tu 1 . + CDS 48775 - 49197 395 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Term 49201 - 49239 7.2 - Term 49183 - 49231 14.6 45 15 Op 1 . - CDS 49234 - 50505 1673 ## COG1301 Na+/H+-dicarboxylate symporters 46 15 Op 2 . - CDS 50495 - 50728 259 ## gi|212696874|ref|ZP_03305002.1| hypothetical protein ANHYDRO_01437 47 15 Op 3 . - CDS 50658 - 51347 846 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 51370 - 51429 15.9 - Term 51399 - 51465 0.8 48 16 Op 1 . - CDS 51481 - 52725 1485 ## COG0151 Phosphoribosylamine-glycine ligase 49 16 Op 2 21/0.000 - CDS 52725 - 53351 656 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 50 16 Op 3 13/0.000 - CDS 53323 - 54351 797 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 51 16 Op 4 . - CDS 54350 - 55633 1396 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 52 16 Op 5 4/0.048 - CDS 55633 - 56115 849 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 53 16 Op 6 . - CDS 56128 - 56808 1018 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 56991 - 57050 8.0 + Prom 57022 - 57081 13.1 54 17 Op 1 . + CDS 57123 - 57716 730 ## HMPREF9243_0684 hypothetical protein 55 17 Op 2 . + CDS 57768 - 58277 635 ## Apre_0506 nucleoside 2-deoxyribosyltransferase - TRNA 58332 - 58405 50.9 # Arg CCG 0 0 56 18 Op 1 . - CDS 58396 - 59187 819 ## COG1408 Predicted phosphohydrolases 57 18 Op 2 . - CDS 59180 - 60991 1758 ## COG0171 NAD synthase - Prom 61018 - 61077 6.8 - Term 61023 - 61077 8.8 58 19 Op 1 2/0.095 - CDS 61087 - 62325 1618 ## COG0426 Uncharacterized flavoproteins 59 19 Op 2 . - CDS 62338 - 64269 2856 ## COG1960 Acyl-CoA dehydrogenases - Prom 64484 - 64543 14.5 + Prom 64413 - 64472 13.0 60 20 Op 1 1/0.143 + CDS 64622 - 65206 643 ## COG0426 Uncharacterized flavoproteins 61 20 Op 2 . + CDS 65199 - 65837 789 ## COG0426 Uncharacterized flavoproteins + Term 65863 - 65903 7.0 - Term 65839 - 65867 1.6 62 21 Tu 1 . - CDS 65913 - 67421 2214 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain - Prom 67446 - 67505 3.9 63 22 Op 1 . - CDS 67538 - 67735 321 ## gi|325847076|ref|ZP_08169902.1| hypothetical protein HMPREF9246_1127 64 22 Op 2 . - CDS 67803 - 68975 1121 ## COG0642 Signal transduction histidine kinase - Prom 69004 - 69063 4.3 65 23 Op 1 . - CDS 69067 - 69420 238 ## gi|325847053|ref|ZP_08169879.1| hypothetical protein HMPREF9246_1129 66 23 Op 2 . - CDS 69417 - 70076 752 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 67 23 Op 3 . - CDS 70073 - 70690 641 ## Apre_1375 phosphate uptake regulator, PhoU 68 23 Op 4 41/0.000 - CDS 70692 - 71543 314 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 69 23 Op 5 38/0.000 - CDS 71554 - 72354 785 ## COG0581 ABC-type phosphate transport system, permease component 70 23 Op 6 39/0.000 - CDS 72364 - 73224 1013 ## COG0573 ABC-type phosphate transport system, permease component 71 23 Op 7 6/0.000 - CDS 73225 - 74085 1125 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 74105 - 74164 7.0 - Term 74169 - 74212 9.1 72 23 Op 8 . - CDS 74222 - 75178 1403 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 75223 - 75282 10.2 + Prom 75206 - 75265 12.1 73 24 Tu 1 . + CDS 75344 - 76357 1278 ## COG2502 Asparagine synthetase A - Term 76182 - 76221 -0.9 74 25 Op 1 1/0.143 - CDS 76394 - 77338 736 ## COG0514 Superfamily II DNA helicase 75 25 Op 2 . - CDS 77341 - 78180 611 ## COG0514 Superfamily II DNA helicase 76 25 Op 3 . - CDS 78224 - 79045 895 ## Apre_1414 hypothetical protein - Prom 79111 - 79170 6.7 77 26 Op 1 8/0.000 - CDS 79243 - 80001 668 ## COG0101 Pseudouridylate synthase 78 26 Op 2 34/0.000 - CDS 79998 - 80792 786 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 79 26 Op 3 15/0.000 - CDS 80785 - 81573 424 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 80 26 Op 4 . - CDS 81640 - 82473 258 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 82490 - 82538 10.3 81 27 Op 1 . - CDS 82542 - 83960 1398 ## COG1376 Uncharacterized protein conserved in bacteria 82 27 Op 2 . - CDS 84001 - 84177 182 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 84231 - 84290 3.7 83 28 Tu 1 . - CDS 84341 - 85132 807 ## COG0116 Predicted N6-adenine-specific DNA methylase - Prom 85161 - 85220 9.5 + Prom 85160 - 85219 9.2 84 29 Tu 1 . + CDS 85244 - 85603 608 ## COG2033 Desulfoferrodoxin + Term 85649 - 85703 1.5 + Prom 85684 - 85743 8.7 85 30 Op 1 40/0.000 + CDS 85777 - 86469 873 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 86 30 Op 2 . + CDS 86456 - 87544 636 ## COG0642 Signal transduction histidine kinase + Prom 87563 - 87622 8.1 87 31 Tu 1 . + CDS 87667 - 88158 660 ## HMPREF0424_1319 hypothetical protein + Term 88330 - 88358 -0.9 - Term 88188 - 88227 4.1 88 32 Op 1 . - CDS 88280 - 89134 941 ## COG1307 Uncharacterized protein conserved in bacteria 89 32 Op 2 . - CDS 89139 - 89912 720 ## COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold - Prom 89943 - 90002 14.2 + Prom 89929 - 89988 7.0 90 33 Op 1 . + CDS 90015 - 90491 664 ## COG2606 Uncharacterized conserved protein + Prom 90568 - 90627 6.8 91 33 Op 2 . + CDS 90661 - 91167 247 ## Apre_1349 hypothetical protein + Term 91346 - 91390 7.4 92 34 Op 1 . - CDS 91186 - 92097 764 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 93 34 Op 2 . - CDS 92105 - 92560 447 ## COG1307 Uncharacterized protein conserved in bacteria 94 34 Op 3 . - CDS 92563 - 92970 340 ## COG1307 Uncharacterized protein conserved in bacteria 95 34 Op 4 . - CDS 92979 - 94277 1430 ## COG0124 Histidyl-tRNA synthetase 96 34 Op 5 . - CDS 94291 - 94968 602 ## Apre_1364 hypothetical protein - TRNA 95018 - 95091 73.5 # Cys GCA 0 0 + Prom 94910 - 94969 6.6 97 35 Op 1 . + CDS 95084 - 95281 430 ## - TRNA 95096 - 95170 90.6 # Gly GCC 0 0 - TRNA 95179 - 95254 87.4 # Phe GAA 0 0 + Prom 95283 - 95342 7.6 98 35 Op 2 . + CDS 95571 - 95951 258 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 + Term 95972 - 96032 11.3 - Term 95974 - 96003 -0.3 99 36 Op 1 . - CDS 96006 - 96488 487 ## COG1576 Uncharacterized conserved protein 100 36 Op 2 . - CDS 96485 - 97117 760 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 97138 - 97197 7.6 + Prom 97178 - 97237 8.6 101 37 Op 1 . + CDS 97271 - 97600 195 ## PROTEIN SUPPORTED gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related 102 37 Op 2 . + CDS 97603 - 98184 572 ## BBR47_39660 hypothetical protein 103 37 Op 3 . + CDS 98174 - 98614 423 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) + Term 98811 - 98855 -0.9 - Term 98799 - 98843 10.4 104 38 Op 1 18/0.000 - CDS 98847 - 99554 287 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 105 38 Op 2 19/0.000 - CDS 99547 - 100338 257 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 106 38 Op 3 24/0.000 - CDS 100342 - 101310 1102 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 107 38 Op 4 20/0.000 - CDS 101312 - 102199 1120 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 108 38 Op 5 . - CDS 102253 - 103413 1534 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Prom 103596 - 103655 14.7 + Prom 103609 - 103668 13.1 109 39 Tu 1 . + CDS 103916 - 105589 1489 ## COG1835 Predicted acyltransferases + Term 105595 - 105632 6.1 - Term 105575 - 105626 8.1 110 40 Op 1 35/0.000 - CDS 105628 - 107487 2070 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 111 40 Op 2 . - CDS 107477 - 109243 2101 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 112 40 Op 3 . - CDS 109236 - 109685 382 ## Apre_1367 transcriptional regulator, MarR family - Prom 109752 - 109811 7.3 + Prom 109494 - 109553 7.6 113 41 Op 1 . + CDS 109781 - 110485 932 ## COG0714 MoxR-like ATPases 114 41 Op 2 . + CDS 110460 - 110690 307 ## Apre_1368 ATPase associated with various cellular activities AAA_5 115 41 Op 3 . + CDS 110683 - 111375 755 ## Apre_1369 hypothetical protein 116 41 Op 4 . + CDS 111372 - 112409 1111 ## Apre_1369 hypothetical protein + Term 112413 - 112456 5.6 - Term 112401 - 112442 8.1 117 42 Op 1 . - CDS 112448 - 113977 400 ## PROTEIN SUPPORTED gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 - Prom 114002 - 114061 11.0 - Term 114047 - 114086 3.2 118 42 Op 2 . - CDS 114096 - 115094 1256 ## COG1876 D-alanyl-D-alanine carboxypeptidase - Prom 115248 - 115307 13.2 - Term 115278 - 115312 3.0 119 43 Op 1 11/0.000 - CDS 115321 - 117492 2222 ## COG0855 Polyphosphate kinase 120 43 Op 2 . - CDS 117496 - 118401 1129 ## COG0248 Exopolyphosphatase 121 43 Op 3 . - CDS 118456 - 119202 880 ## COG0796 Glutamate racemase 122 43 Op 4 . - CDS 119195 - 119716 424 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 123 43 Op 5 . - CDS 119727 - 120038 329 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 124 43 Op 6 . - CDS 120104 - 121288 1034 ## COG0477 Permeases of the major facilitator superfamily - Prom 121314 - 121373 11.4 - Term 121329 - 121388 7.2 125 44 Tu 1 . - CDS 121391 - 122233 1389 ## COG1250 3-hydroxyacyl-CoA dehydrogenase - Prom 122285 - 122344 7.6 126 45 Tu 1 . - CDS 122346 - 123683 1467 ## COG0427 Acetyl-CoA hydrolase - Prom 123708 - 123767 6.6 - Term 123728 - 123769 8.3 127 46 Op 1 29/0.000 - CDS 123820 - 124824 1603 ## COG2025 Electron transfer flavoprotein, alpha subunit 128 46 Op 2 2/0.095 - CDS 124834 - 125646 1184 ## COG2086 Electron transfer flavoprotein, beta subunit 129 46 Op 3 12/0.000 - CDS 125671 - 126105 729 ## COG1960 Acyl-CoA dehydrogenases 130 46 Op 4 . - CDS 126149 - 126832 883 ## COG1960 Acyl-CoA dehydrogenases - Prom 126994 - 127053 9.5 + Prom 127166 - 127225 10.2 131 47 Op 1 . + CDS 127333 - 128760 1787 ## COG0277 FAD/FMN-containing dehydrogenases 132 47 Op 2 23/0.000 + CDS 128762 - 129115 386 ## COG1380 Putative effector of murein hydrolase LrgA 133 47 Op 3 . + CDS 129105 - 129797 732 ## COG1346 Putative effector of murein hydrolase + Term 129806 - 129846 8.1 - Term 129799 - 129828 1.4 134 48 Op 1 . - CDS 129831 - 130223 456 ## FMG_0082 hypothetical protein 135 48 Op 2 . - CDS 130261 - 131760 2039 ## COG0516 IMP dehydrogenase/GMP reductase 136 48 Op 3 . - CDS 131769 - 135437 4266 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 137 48 Op 4 . - CDS 135448 - 136953 1712 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 138 48 Op 5 . - CDS 137025 - 137162 95 ## gi|212697473|ref|ZP_03305601.1| hypothetical protein ANHYDRO_02043 - Prom 137227 - 137286 12.2 139 49 Tu 1 . - CDS 137290 - 138528 1267 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 138559 - 138618 7.2 + Prom 138515 - 138574 6.9 140 50 Op 1 . + CDS 138671 - 139069 587 ## Apre_0223 transcriptional regulator, XRE family 141 50 Op 2 . + CDS 139078 - 139629 576 ## Apre_0222 hypothetical protein 142 50 Op 3 . + CDS 139616 - 140179 562 ## COG0500 SAM-dependent methyltransferases 143 50 Op 4 . + CDS 140225 - 141559 1296 ## Apre_0745 peptidase S41 144 50 Op 5 . + CDS 141638 - 142195 622 ## COG1971 Predicted membrane protein Predicted protein(s) >gi|325480958|gb|AEXN01000015.1| GENE 1 2 - 704 797 234 aa, chain - ## HITS:1 COG:FN1038 KEGG:ns NR:ns ## COG: FN1038 COG0697 # Protein_GI_number: 19704373 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 10 233 70 296 303 165 46.0 7e-41 MDAYTKTETIRGAIATGIVMAIAVSFQQIGVYYTTSGKAGFITSLYVVIVPIFAIFMGKK VSKKTGISIILALIGLYLLTVKVEDGFSVNKGDILIFVGSLFFAFHILFIDYYSPKSDSV KMSMLQFFIASFISFCLMILFEKPDINLILKGILAILYLGIFSSGLGYTLQIIAQKDTDP TISSLILSLEAVFAAFFGFLFLKEVPVGREIFGAILMFMAIILSQIPDSLIKKI >gi|325480958|gb|AEXN01000015.1| GENE 2 727 - 891 169 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696924|ref|ZP_03305052.1| ## NR: gi|212696924|ref|ZP_03305052.1| hypothetical protein ANHYDRO_01487 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01487 [Anaerococcus hydrogenalis DSM 7454] # 1 52 1 52 301 92 94.0 1e-17 MKNKHRGELLLFLTSFIWGFAFIAQKLGSDYIPPFTFNFLRNLVAGIFYFLFNF >gi|325480958|gb|AEXN01000015.1| GENE 3 1105 - 4137 3420 1010 aa, chain - ## HITS:1 COG:CAC3442 KEGG:ns NR:ns ## COG: CAC3442 COG2176 # Protein_GI_number: 15896683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Clostridium acetobutylicum # 1 1009 433 1450 1452 944 48.0 0 METTGLYKYSDKITEIGAVKVENGEITEVFNELVNPEKMIPEKVVELTGITNEMVMDKPK IDEILPKFLEFSKDAYFVGQNTDFDIGFVKEACDNLSYQFEPIYLDTLPMARAVFPSMGR FSLDKLAKKLAVGPFNHHRASDDAMTTAKVFIKLFEKIKDKNKDLSLSKINSIKTKWPIS RHENFSSIIFAKNYQGLKNLYKIISDSRMKYFNLEAKTPFDLVSKNKEGLIIGSGGKDGL LFKAIRDDYSEEKIDEICEFFDFFQIEALGVFADDLENGSIRNKEQIIEINKKIIELGKK HDKLVVATGSVRYMEKKDYVLRNILHKGQFFHYRENNPLYYLKTTNEMLDEFYYLDDQTK MEVVIDNTIKISDQIESIMPIPHETFPPKIEGSDKRLKDTTYEKAISIYGDPLPELVKTR LDKELDSIISNGYAVLYIIAKELVEKSNRDGYLVGSRGSVGSSFAATMANITEVNPLAPH YICPNCKHSEFITDGSIGAGIDLPDKTCPKCGTEMNKDGHDIPFEVFLGFEGDKEPDIDL NFAGEYQPTIHKYTEELFGEGKVFRAGTIGTIKDNTAFGYIKKYMEDNELTLSNAQIRKY QRGLFDVKRTTGQHPGGLMIVPNDKEIYDFSPVQYPADDGKDDIKTTHFTYNMMHGVILK LDLLGHDVPTIIRSLQDLTNTDPLKLQMDDENVMNIFSSTKPLNIKYDFSNNEIGTLGIP EFGTSFVRGMLKDTFPTKFSEMTRISGLSHGTDVWLNNAQDLVKSKTAGFDQIISTRDDI MNSLINLGLDKKKSFQIMEKVRKGKELSEETLNYMRENKVPDWYIDSCLKIKYLFPKAHA VAYCLMSYRIAYYKVYYPKAFYATYFSTKLNDFQYSVIVKGLKSIQYALNEINQLEKPTQ REKNLRSLLEVAEEMAARDIKIKKADLYKSEAVKFILDEDGEILPPLSAVDDVSEAMAKD VVEEREKAKFISIEDLKKRTSLNKNALNSLKNLDIINNLQEENQMSLFDL >gi|325480958|gb|AEXN01000015.1| GENE 4 4182 - 5279 1360 365 aa, chain - ## HITS:1 COG:CAC3442 KEGG:ns NR:ns ## COG: CAC3442 COG2176 # Protein_GI_number: 15896683 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Clostridium acetobutylicum # 150 360 203 418 1452 108 34.0 2e-23 MKISLKSIIDTDKDYYIKNAIYSKKLNKLKLIIVGKKEKEIEEKLENHFSYVNLALKYED IIKKEEKANPIEEFYENQPLPDFYETGYEDQVEEIVDEKKDKAKENKENKDIFDLPNIEN KKDENTKDDKPSSLRDLKKLELENMIQNARNNKKESEKKEKNPSEILKYGRNIKADEFKI EEIYDKKGMNLSLKGEIFGIDIFESKRGNFIYSFDLEDETDAIACKMFVQPRNKEKLDNL KENMAVKVQGVLNYDGYSHEDVFTVNSMEECEKKQRLDTYPKKRVELEIHTKMTNLDGFV DMDELAKRLKSWGHTACGITDTETLQALPDMYDKLGKNDIKMLAGSELLLVDKKLRILTN NYNKK >gi|325480958|gb|AEXN01000015.1| GENE 5 5269 - 6327 1552 352 aa, chain - ## HITS:1 COG:CAC1797 KEGG:ns NR:ns ## COG: CAC1797 COG0821 # Protein_GI_number: 15895073 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Clostridium acetobutylicum # 3 344 5 346 349 377 57.0 1e-104 MKKTRKVYVGDVAIGGGSPISIQSMTTKETKNIKEVVKQINDFEKAGCDISRSAINSLED ARAISEIKKRTNLPFVADIQFDYKLAIAAVENGCDCLRINPGNIGGADKVKILVEKCKEK NIPIRIGVNSGSVHKDMIEKYNGVNVDSLVYSALDEVKVLEDLDFHDIVISIKSSDVNTM IDVNRKISSLCDYPLHLGVTEAGPLYQALVKSSIGMGSLLKDGIGDTIRVSITGDPIEEV KAGKTILKSLGLRRDGIDLVSCPTCSRTSVNLDEIVNEASERLDKLNLNLKVAIMGCPVN GPGEAKEADYGIACAKGYGFLFKKGITIKKVKQEEIVDSLIEEILKDEKNEN >gi|325480958|gb|AEXN01000015.1| GENE 6 6338 - 7351 1014 337 aa, chain - ## HITS:1 COG:CAC1796 KEGG:ns NR:ns ## COG: CAC1796 COG0750 # Protein_GI_number: 15895072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Clostridium acetobutylicum # 3 334 5 334 339 218 40.0 1e-56 MKSVIISIIMFLFLILIHEFGHFIVAKKSGIKVNEFAIGMGPKIFSKQKGETLYSINLFP IGGYCAMEGEDNESDDERSFDKAPAYKRFLTILAGPLTNLIFAGLLFSLVSFNTGKPSKI VGEFTENSPIKSQGFKVNDEILEINNKEIKEFSDISKSLEDFYKNHNKNDEISLTVKRNN KEVEKNVRVKFEGKRPILGFIPKNQKVGFFEAIVIGIKQVGSMISMMVLVLKSLFTGQLG FSALSGPVGVVKEMGRQANLGIMNLIFFLGYISVNLGFFNLLPIPALDGSKIFTSLFEMI TKKRVNKKIEEKFTIGGFILLLGLILLVTIKDLINLF >gi|325480958|gb|AEXN01000015.1| GENE 7 7361 - 8137 837 258 aa, chain - ## HITS:1 COG:ECs0177 KEGG:ns NR:ns ## COG: ECs0177 COG0575 # Protein_GI_number: 15829431 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Escherichia coli O157:H7 # 129 255 117 244 249 103 42.0 3e-22 MNLAKRLFGGSLILIALILITYFGRPTFAIGFTIFSSIACIELIRALRNISYNVPKRFAL VVNAFLMFNAYFGEDKIFIIGIVTIMISIFVFMIFNKKFQMQDFFALLFVITYISIFMSN AVMIVDKRYLYMLYIIAWGSDTFAYLTGVSIGKHKIKSLEEISPNKTIEGFVGGVCGAVL LNLIYVNFSGLDKNIILVIIFTIISAILSETGDLVASFIKRKCGIKDYGDLIPGHGGILD RFDSILFISPCMFLFTII >gi|325480958|gb|AEXN01000015.1| GENE 8 8124 - 8828 774 234 aa, chain - ## HITS:1 COG:BS_yluA KEGG:ns NR:ns ## COG: BS_yluA COG0020 # Protein_GI_number: 16078716 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Bacillus subtilis # 8 230 34 260 260 234 51.0 2e-61 MKEKELNHLAIILDGNGRWAKNKNMPRSMGHKEGSENVVDIALYAKEKGIKYLTLYAFST ENWKRPKIEVNYLMKLLAKFIKDKTKLLMENEVKLNIIGDISKLPEKTMRACLDVCELTK NNDQLVLNMAINYGGRSEIVKAFKDMAKDGIDFEKIDEDDISNYLYTKNMPDPDLLIRTG GDLRISNFLIYQMAYTEYYFTDVLWPDFSKKDLDKAVDSFYGRDRRYGGLNEPS >gi|325480958|gb|AEXN01000015.1| GENE 9 9101 - 9850 874 249 aa, chain + ## HITS:1 COG:CAC2114 KEGG:ns NR:ns ## COG: CAC2114 COG0564 # Protein_GI_number: 15895383 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 4 245 62 300 305 197 45.0 2e-50 MEDEIEISDDLFERAKIEAEKMDLKIVYENEDYAIIDKDENVIVHPAGSIVSGTLVNGLL YHFGYNNLSHIGGDDRPGIVHRLDKDTTGLMVIAKSNSSYKFLKNLFEKRKIDKEYLAIC NGIFKKKSGEIHTFMDRDPNNRRKMAVRNSGRDAISKYEVLSENDGYSLVKIKILTGRTH QIRVHMTHINHPLLGDPVYGNVKHKFNLDHQLLHCHKLGFTDKDGIYREFETDVHEDFKK YQKVLGLGE >gi|325480958|gb|AEXN01000015.1| GENE 10 9852 - 11381 1499 509 aa, chain + ## HITS:1 COG:slr0904 KEGG:ns NR:ns ## COG: slr0904 COG0606 # Protein_GI_number: 16331658 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Synechocystis # 1 503 1 506 509 464 43.0 1e-130 MYSKTNTVTLLGLDGKAIEVESDITSGMPAFNIVGLPDSAIKESKDRIRVALINSGFKFP QGRITINLSPADIKKEGTQLDLPIAISLLKSMGVIENSKDDFIFIGELSLDGRIVPVKGA LAMVISMREKGFKNFIISDSNKDECAIIKDCNIFPFINLEELVSFLNENTKKSPYKIKLS NISENITYPYDFSDIKGQDSLKRALQIAAAGGHNLLMIGPPGSGKTFSAKHLPSILPDMD FEEKVEVTKIYSVMGLLESGKLINNRPFRSPHHSASEVSLIGGGANIPKAGEITLAHKGV LFLDEFPEFSKKTIEALREPLENKEINISRSMASIKYPADFILIAAMNPCPCGNYGNPLK ECTCSQNEIRRYLSKLSSPILDRIDIHIEIKPVKYKDLDDNIKTKSSKEMKDEVQRAREI QNKRYEDEEISTNGALSTRLMKKYIKLDKNVKALGQKAFDKYNFSVRSYNKIIKMSRTIA DLENSENIEPKHLLEAIRYRSLDDKYWSV >gi|325480958|gb|AEXN01000015.1| GENE 11 11381 - 12565 1051 394 aa, chain + ## HITS:1 COG:NMA2159 KEGG:ns NR:ns ## COG: NMA2159 COG2804 # Protein_GI_number: 15795030 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Neisseria meningitidis Z2491 # 13 386 175 552 558 301 44.0 1e-81 MDNNLINSNIDLYIDNLVTKALTLNASDIHLEPMDKNFSRIRFRIDGKLRNITEMDYPSY IKLLTRIKLSSKLDISEKRRPQDGYLKLEKFPHIDFRISTLNTVVGEKLVLRILSIENFK KSQNLLGFSDRSKEILQKAIKNKSGMIIFSGPTGSGKSTSLYSLLNKLNDEKSNIISIED PVEINILGINQISVNEKIGLSFQNALRSILRQDPDIIMLGEIRDDETAKMAVRAAITGHL VLTTLHTNNSFASINRLRDLSVDDYLIKQAVNTLASQRLVRKLCSCKKKRKISNKEYNFI KNYFDIDKDTYIYEPSTCDKCHDGYLGREAVEEIVDFDQDYKELFFENKNFSKNDLDLLN KKKNFKSMTYNGIKKVLEGVTSLEEVLDSIYYFN >gi|325480958|gb|AEXN01000015.1| GENE 12 12574 - 13983 2005 469 aa, chain + ## HITS:1 COG:SPy1815_2 KEGG:ns NR:ns ## COG: SPy1815_2 COG1263 # Protein_GI_number: 15675645 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Streptococcus pyogenes M1 GAS # 105 463 10 368 385 423 65.0 1e-118 MDHKKVAQEVIDAIGADNIKSIAHCATRLRVEVKDKDKIDEKAIENIDGMKGAFFNSGQY QMVFGTGTVNKVYEQADKILKNSESLSGNEENKDTSFKKKDTNKNAFQKAIRTFGDVFVP IIPVLVATGLFMGLRGLITQPEILGIFGLSPEDISQNFLTWTQILTDTAFAFLPALVCWS TFKVFGGSPVLGIVLGLMLVNPALPNAYQIASGDVKPIIMFGFIPVVGYQGTVLPAFISG LIGANLEKKIRSFMPDSLDLLFTPFLTLMIMSILSLFGIGPVFHSLENIVLYATEWVLGL PFGLAGIIIGGFHQLIVVTGIHHIFNFLEVQLLANTGRNAFNAILSAATVAQAGASLAVG IKTKDKKLKQIALPSAFSATLGITEPAIFGVNLRFVKPFICAMIGGAAGGFFASIFKLSA TGMSVTVLPGTLLYLDNILMYLIMLLIGGSVSFILTYMFGFSDSMLKDK >gi|325480958|gb|AEXN01000015.1| GENE 13 13983 - 15425 1399 480 aa, chain + ## HITS:1 COG:SA1846 KEGG:ns NR:ns ## COG: SA1846 COG1621 # Protein_GI_number: 15927616 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Staphylococcus aureus N315 # 3 466 7 481 494 293 38.0 5e-79 MIDDKKRLIKKDDEKELKNLHSSLKDSVYRDYFHISPLTGLLNDPNGLFFKENKFHIFYQ WYPFKGIHGLKHWYEVQSPDLINFKNIGLFLKPDKIYKNRGAYSGSAFVENDDVYIVYSG NQKDENENRIPNTVLGKYENGKIIDEKVIISPNKNYKEDQRDPRIFKKNGFYYLTLGARD KKDHGCLLIYRSKNINKDWEFFGELEIKDFDNKAYMWECPDILKVDGKDVLLFSPQGMKA YGEFFNNIYQNGYIIGKLDIENKIFYPESEFIELDRGFDFYACQAFANTKNPYLIGWVGL PDITYPNDKEFSGNLSLVRELKIKYNKLFINPVKNIDDLRLEKIEFNEIVKNIEPLEISL DNIENSLQIKVYSQEKNGGFIISYDKNKKEFKIDRSKLENKISQDFGFERKISDVDLKSM KIYVDKSTIEIFINQGEYALTSKVFPKNKEKDLYIEGLSKENTQIYTLKKSYIDNFSLNM >gi|325480958|gb|AEXN01000015.1| GENE 14 15453 - 16562 1301 369 aa, chain - ## HITS:1 COG:SA1449 KEGG:ns NR:ns ## COG: SA1449 COG0482 # Protein_GI_number: 15927201 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Staphylococcus aureus N315 # 7 367 4 368 372 473 63.0 1e-133 MENKDKKDIKVIVGVSGGVDSSVAALLLKEEGYDVSGIFMKNWDEEDENGVCTAEVDYED AVKVCNQIGIPYYSINFEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFLDYAKD LGADYLATGHYARVDRSSGETKMLRGIDSNKDQTYFLSQLSQDQIKDVLFPVGNLDKKEV RKIAKENNLATADKKDSTGICFIGERNFNEFLSNYLPAKEGNIVDTDGNIMGKHYGLMYH TIGQRRGLGIGGEGEAWFVCGKDLEKNELIVCQGKNNEKLFSNRLIGSNLSSISAEGLKK EFDCTCKFRYRQKDINSHVKILDDGKVEIRYDKTKAVTPGQAAVFYDGEVCLGSCIIDEV YNGDKRLKV >gi|325480958|gb|AEXN01000015.1| GENE 15 16552 - 17478 899 308 aa, chain - ## HITS:1 COG:SA1450 KEGG:ns NR:ns ## COG: SA1450 COG1104 # Protein_GI_number: 15927202 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Staphylococcus aureus N315 # 5 302 57 372 380 212 39.0 8e-55 MQKSINAKPNHIIFTASASEANNTILSNFKDDLVITSKIEHDSILNTVNKDKTIFLSVDK DGFFSLDELKEKLTDEVKLVSLMFVNNEIGAIEPVYEIGEFLKDKDVFFHVDCVQAYSHI DIDVEKLHCNSLSLSGHKIGGLNSFGVLYCNKKIAPFIKGGEQEKDRRAGTSFTMGAYSM AKAFPKAYSEREKIKELKFYFVKKLKESNFLYEINGSLENSTDHILNLYFPKVKNELLLT YLDMNGICISVGSACRAGSVEASNVIKNMYDEERARHSVRFSFGFTNTKKDIDYTFEVLK KLRGIDGK >gi|325480958|gb|AEXN01000015.1| GENE 16 17463 - 17633 180 56 aa, chain - ## HITS:1 COG:no KEGG:Apre_0565 NR:ns ## KEGG: Apre_0565 # Name: not_defined # Def: aminotransferase class V # Organism: A.prevotii # Pathway: Thiamine metabolism [PATH:apr00730]; Sulfur relay system [PATH:apr04122] # 1 43 1 43 355 62 65.0 5e-09 MIYFDYAATSIKRKEILKDIFDNMENFDGNPDSLHVLGRSGKKSFGKFKNGNCKNL >gi|325480958|gb|AEXN01000015.1| GENE 17 17676 - 17897 395 73 aa, chain - ## HITS:1 COG:CAC0545 KEGG:ns NR:ns ## COG: CAC0545 COG4443 # Protein_GI_number: 15893835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 69 4 71 74 81 63.0 4e-16 MAIKFDIVENLGVLSTNAKGWTKELNLVSWNEREPKYDLRDWNEDHTRMSKGITFTKEEA EVLKEVLKEEFDD >gi|325480958|gb|AEXN01000015.1| GENE 18 17906 - 18337 405 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325847085|ref|ZP_08169911.1| ## NR: gi|325847085|ref|ZP_08169911.1| hypothetical protein HMPREF9246_1082 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1082 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 143 1 143 143 220 100.0 3e-56 MGFIDEKNLTKNQKNLMDLKIRLIKAEFELNFYLTGYENLSQIYNDKNKLNRIFMDSYIS LMDHNPYDFIEKIDRFNDLSLSYKTDDIKIKNLLKSLDDIKNLDDEEILKQKGRIKRRIR KMELAASEIENVLLSSLPRNYYS >gi|325480958|gb|AEXN01000015.1| GENE 19 18455 - 18940 437 161 aa, chain - ## HITS:1 COG:SP1359_1 KEGG:ns NR:ns ## COG: SP1359_1 COG0225 # Protein_GI_number: 15901213 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pneumoniae TIGR4 # 1 156 1 156 163 176 55.0 1e-44 MKKIYLAGGCFWGVEAYFKDIEGVESTLVGYANGNTKDTSYEKLYKTNHAETVEIKYDGK EESLKRILEYFYYIIDPFSINKQGNDIGLQYRSGIFSKDEKDLEFARRFLDQKQKNEDRK IQIRVEKLENFVKAEDYHQDYLDKNPNGYCHINLLDKPNLA >gi|325480958|gb|AEXN01000015.1| GENE 20 18937 - 19413 554 158 aa, chain - ## HITS:1 COG:lin0586 KEGG:ns NR:ns ## COG: lin0586 COG3610 # Protein_GI_number: 16799661 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 3 146 7 149 152 76 30.0 2e-14 MHLLLGFIFSYISALGFAMLFSCPKSSIKLSSLAGAIGFLIYQIVGDIIGGGVFLKALAG AYITGIMGEIFARKCHMPAILFIVPGIINLVPGKGIYNTLYYFVDGKKSLAFINLFDTLA VASAISFGILLASALSKSLRKFKFRKPSKRYDWRKKKK >gi|325480958|gb|AEXN01000015.1| GENE 21 19423 - 20193 1024 256 aa, chain - ## HITS:1 COG:BH0081 KEGG:ns NR:ns ## COG: BH0081 COG2966 # Protein_GI_number: 15612644 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 9 256 5 250 251 103 33.0 3e-22 MKYNEDDINKLLEITSRAGAMMLKNGAEIYRVEDTVERIIRSIYNASDIDVFATFNAMMY SFNVDGKTYANVKRVKNRGNNLIIVDRVNSFSRRFCNHELTLDEALIELDNIRKTTKIDP KVTIIGAVLASTAFPILVNPKAPIFLDLPITLIVSFLTFLIFRRVEEKMFGYFIENFVAG IMVSFLTIMIGKFVGGFNMANVIISSMMPYVPGFILTNSIRDLMSGDATSGLVGLTMSLF ISLALAIGVAVPMTFL >gi|325480958|gb|AEXN01000015.1| GENE 22 20262 - 21026 786 254 aa, chain - ## HITS:1 COG:sll0897 KEGG:ns NR:ns ## COG: sll0897 COG0484 # Protein_GI_number: 16332061 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Synechocystis # 196 250 8 62 377 67 52.0 2e-11 MKKILGKFIHGLASVLNSIFNFLINILNAIVTVFEGLSQVIMLVGCSFIFVLPIFFIAIP PRILSIFLIIAVVPFLGKSFISLLRYGNYTLIEWMYDKADTLISGQMKGYDNLSDYAKKY RLDQERERRRQAEEERQRRQEEMNQRFEEFFQGFNFSGFDFDQGNFNGSYDTGSYQNGGF VNDLGFKEKYQKACDTLGVSYTSDQYEIKLAYRKLAKKFHPDISTDPNATEKFQKINDAY DFLSSENINKYKNM >gi|325480958|gb|AEXN01000015.1| GENE 23 21077 - 22846 219 589 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 364 576 38 250 329 89 30 1e-16 MEKRTYSDKELIKKFIPYYKDYKNILAIDLFSAFLTTVCELILPIILSTLTDHASNSSLT YSIILKLTLIYALTKLIEVAGRYFMQSYGHIMGAHIEKDMRRDIFKHFLTMSTAFFNETK IGQLMSRMTTDLFDITEFSHHCPEEFFIGFIKLTISFVVLMTINVPLTLVLYIIIPVMVY AARVKRRAFSRSVKSEKRQIGEINASIEDSLLGIDVVKSFANEDLEKRKFKKGNDKFVDI KKVKYYNMASYNMINQLFAGSMYAILIVMGGNFVIKNIMSPGDLVAFVLYLNTIIATVNR LVEFTDQYQKGITGIERFNEVINMKSDIFDKKDARELTDVKGKISFDHAYFKYPDQGEED PWILEDINFDIDIGENVALVGPSGAGKTTVTKLIPRFYETNKGRILIDDKDINDLTLNSL RNNIGIVQQDVYLFGGTIRENILYGKEDASDEEIIRASKLAGAYDFIMELSNGFDTYIGE RGVKLSGGQKQRISIARVFLKNPPILILDEATSSLDNTSEAIVQDSLEKLSKGRTTLTIA HRLSTIINADSIIVLTDEGIVERGSHKELLDKKGIYYKLYNSNNEELFG >gi|325480958|gb|AEXN01000015.1| GENE 24 22957 - 23799 1115 280 aa, chain + ## HITS:1 COG:MA3786 KEGG:ns NR:ns ## COG: MA3786 COG0543 # Protein_GI_number: 20092582 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 3 278 22 297 299 258 52.0 6e-69 MARIIEKTNLNDSTIKFVVKSPDIAKRAKPGQFIILRIDEKGERVPFTISETDDENVTII VQIVGGTTIRMNELKAGDGFLDFVGPLGQPTELDQYKGKNVCVIGGGLGTAIAYPQAKYL HKIGAHTDVIMGFKNKDIIILEDELKKSSDNLYITTDDGSYGKQGFVTEVLKENIENGKK YDLVLAIGPMIMMKNTALVTKEYDIPTIVSLNSIMVDGTGMCGCCRVTVGGQMKFACVDG PDFDAFKVDFDEAMNRGRNYQQEEREHICRLTGDIRNGKI >gi|325480958|gb|AEXN01000015.1| GENE 25 23786 - 25177 2127 463 aa, chain + ## HITS:1 COG:PAB1214 KEGG:ns NR:ns ## COG: PAB1214 COG0493 # Protein_GI_number: 14521926 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Pyrococcus abyssi # 6 462 4 475 475 489 54.0 1e-138 MAKFNLCKEKVAMPEQDPNVRNKNFKEVALGYDLEMAQEEALRCVQCKNKPCMGGCPVSV RIPEFIHQVVEGDLDKAYEIISSTNNLPAICGRVCPQESQCEGVCTRGRNGEPVGIGRLE RFVADYHMNKSYNKPVEVTGQNKKVAVVGSGPSGLSCAADLAKLGYQVVMFEAFHTAGGV LMYGIPEFRLPKTLVQKELKNVIGLGVKLQRNTIIGRTKSINELFDEGFEAVYVSTGAGL PKFLGIEGENLNGVYSANEFLTRMNLMKAYKFPEYDTPVHIGKKVCVVGGGNVAMDAARS AKRMGADVTVVYRRSFEEMPARVEESHHAKEEGINFMNLHNPVEIEGENGWVKKVKLEVM ELGEEDKSGRRRPIPTGKYEEVDFDSVIVSIGQSPNPLIKQTNDDINTESWGGIIIDDST MTSKDGVFAGGDAVSGAATVILAMGAGKKAAENIDKYIKNKAK >gi|325480958|gb|AEXN01000015.1| GENE 26 25299 - 27605 2821 768 aa, chain - ## HITS:1 COG:DR0075 KEGG:ns NR:ns ## COG: DR0075 COG1511 # Protein_GI_number: 15805116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 250 763 245 795 1467 129 24.0 2e-29 MNNKLMKGFSLVLASSLLMTNVAYAKDLDIRKNETIYVTKEANKIKDKTGSIWINSDNNI KIKDKTSLKNIKNLKTDKKVNLENGYINWNEDSKDIYYQGDSKEDLPVDINVKYFLDGKE MTFDKLKGKSGHLKIKIEAVNKTKTKANINGEEREIYSPYLALTEINFNSEKVKNLTTDS GKLVKDGKNEIIAAVLTPGLRENFDGIIEGDKLDNFKDKVEMEMDVTDYEPTEIYALISN EFFQEEGKLDSLDELKNGVNELEENAAKLVDGSNQLDQGSKKLNDGIGKLNEGAGQLSQG SSKIVSSFDQLANGFSGLPGKIQTINSAVNQLNNGGSKLYSGVNQYTGAVGEINKNMALL NQGAESLNNGASEIDSSLEKLNKGTSSLRNTLKQSSNNNDLGMLTESMGQLSSGLDELSN GISPLAESINQINGGYKKIEESSKTLSQGINNLNQSAQNLPGLDSNVQNINAQVGAIDQV IANLQAKNEDGSLSSEIENLNAIKQGLSIESQSLSVNSQANLSIKEGLGQLAGGSEELTS SINKANSGLGQVSSKLNDSKEKVQTSSAKLSQASKKISSSLSNSNIKKLEESVIMIDDAT GKIKAGSEKLKEGAQRNQVGVNKLSGAINQLDSNSGELLNGSASLSSGLNQFQERSKSLS QLANINETAINPMANGLKQLDNGINKLSNSTGQLKNGSDQYVSSFEKFKKGLSDYKTKGI DKLANKSGDLTEISEILDQMSKIAKENKAITGTSDDFETSSRIIEKIK >gi|325480958|gb|AEXN01000015.1| GENE 27 27615 - 29669 2296 684 aa, chain - ## HITS:1 COG:BH0720 KEGG:ns NR:ns ## COG: BH0720 COG1033 # Protein_GI_number: 15613283 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Bacillus halodurans # 1 680 1 676 687 261 27.0 3e-69 MKRISKFISHHPRLVLLIMTILLIPSWFGYKATGVNYDILSYLPADLESTQGQEILDKDF KNAATGMLLLKGDDHDADKLKNEILKVDGVEDVISKTSILGDSIPNEFLPDEIRDVFYSK DCTLLMVKFAESSSSFRTMKAIENIKKIESKEKFLSGISSLVKDTKDLIDQETPIYVLLA VILALVILSLTNESTIIPFLFILNIGYAILYNFGSNLFLGEISYITKAIAAVLQLAVTTD YSIFLYHRYVEEKKNNEDKNNAMDIAIQKTVSSIFASSLTTFAGFIVLILMRLGLGKDIG LVMSKGVLLGLISTVVVLPPMILIAEKLVARFNHKIFLPSFDKTSNFVLNHKNGLFIAFL ILFIPAIYGARNTNLYYNLDRSLPQDLDSIVALNKMKKDFNMASTHFVVVDEDLSKNNIS SLIDEIKEVDGVNNVLSANSITGLTIPDSVLPDKLKDNFAKNGYQMIMINSKYQTASDKV NKQVDKINKIVKKHDKNGYLTGEAVLTKDLTVLSDRDFKMVNIASIIIVFIIIAVVFKSF AIPVVLISVIELAIQINMGIPFYLGQTIPFVTSIIIGVVQLGSTIDYSILMMDRFLVEYK ETKDVDKALKLTVKETSKSIVTSALSFMAATVGVGLYSKMEIVSTICMLLARGAIISMLS IILFLPAVIKIAFPFIKKTTKGLN >gi|325480958|gb|AEXN01000015.1| GENE 28 29669 - 30259 741 196 aa, chain - ## HITS:1 COG:no KEGG:Apre_0547 NR:ns ## KEGG: Apre_0547 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: A.prevotii # Pathway: not_defined # 1 195 2 196 198 263 72.0 4e-69 MSDVENKKEKIMEAALKIFKEKGADKTSVRDIMIEAGFGLGTFYLYYTDKNDLQEKMVLN IATEIILNAEKTCVQTDPIERYISFVDYIIDYLIAHPFELDLLSKNITWTLYTKIENDYG LSEADSTLKFILNKYDNLFLESHTESQKLYILSLTLEIMMSTCKSAVLKDSVLSIDEMKP VLFAIIRKIFNRTGDK >gi|325480958|gb|AEXN01000015.1| GENE 29 30398 - 31069 605 223 aa, chain - ## HITS:1 COG:FN1462 KEGG:ns NR:ns ## COG: FN1462 COG1167 # Protein_GI_number: 19704794 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Fusobacterium nucleatum # 2 205 246 456 469 152 45.0 6e-37 MGTVMSIQRRIELLNWASLSKDRYVIEDDYDSEFKFTGYPTESLKAMDKNSDVIYFGNFS KLLAPSLRISYMILPDDLLEKYEKNFKGLSNTVSTFVQKALANFIKSGEFEKHINRMKNI YFKKFKFIVRKLEEIEEISFPQKVDSLNLLIKIDESIDIIKFKKILNNKSLHLIDLNKFT YKKNGKENYFILGFANLSIEEIDQGIEIIKFALKNSKNNSLES >gi|325480958|gb|AEXN01000015.1| GENE 30 31221 - 31796 605 191 aa, chain - ## HITS:1 COG:BH2695 KEGG:ns NR:ns ## COG: BH2695 COG1167 # Protein_GI_number: 15615258 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus halodurans # 12 183 15 191 462 105 30.0 6e-23 MYLNLPKNKKFLYDKIYEIIKNKIIKGEIKEGERLPSIRNLSKDINVSINTIKKVYYKLE EEGYIYVKDKSGFYCRKIDDLIILDKKNIEEKIESSQEIKYDFSISGVDYENFPYKIMQK YMRESINKNDIKILDKGSYKGYEPLRNAIKIYLKNSRNIKTNSRNIIISSSTEHLFSIIK KLLTDQTLFCF >gi|325480958|gb|AEXN01000015.1| GENE 31 31886 - 32737 1390 283 aa, chain + ## HITS:1 COG:FN1463 KEGG:ns NR:ns ## COG: FN1463 COG0214 # Protein_GI_number: 19704795 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Fusobacterium nucleatum # 6 283 1 278 280 364 71.0 1e-101 MPDKDINLKFEKKVIMDVMNVEQAKIAEAAGASAVMALERVPADIRAAGGVSRMSDPKMI EEIMKAVKIPVMAKVRIGHFVEAQILESLGIDYIDESEVLTVADDFNHIDKKKFKTPFVC GARNISEALRRISEGASMIRTKGEAGTGNVVQAVRHMREINREIQRISVLTDDEIFSYAK DLAVDVELLKYVRDNKKLPVANLSAGGVATPADAALMMQLGAYGVFVGSGIFKSGNPEKR ANAIVKAVANYDNPDVILEVSKDLGEAMVGINEDEIKEIFENR >gi|325480958|gb|AEXN01000015.1| GENE 32 32800 - 33639 935 279 aa, chain - ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 5 258 26 280 294 224 46.0 1e-58 MKYFKLNDGNKIPALGLGTYKITNREDIAKTIEAALENGYEYIDTAKLYENEDMIGAELK NSGKKRDQYQLATKVWPSDFGYDKTKKSLDESLEKLQTDYLDVVLLHWFGKDFDKSWKVF EDYKRQGIVKTIGVSNFELSQLKKLLEIGEKPAIDQLESSPHFQNDDTVKFLKENDIIHQ AWSPIARGRSELLEEFVIKKLANKYNKTPAQIVLRWHVERGTMPIPKSTNPERIKENINI FDFSLDDEDMKAIKSIDLKKRYSSDPEDEKWLKDLLKRV >gi|325480958|gb|AEXN01000015.1| GENE 33 33692 - 34420 248 242 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 2 239 4 238 242 100 29 5e-20 MKTVLITGSSRGIGEAIAKKLNKSYNLVLTYNKNKDKALNLLGDLRKENPNVIAVKCDVK NEEDVNNLFDLAEKNFSHVDILINNAGISYFGLLQDMDFSSWNEIINTNLSSIFLTSKRA IPNMLSQKSGVIINMSSIWGNFGASFEVAYSASKGGINSFTKALSKELLPSNIRVNAISP GIVDTDMTEFDLSDDDKRDLKEDLIEKRFAKSEEIANLVEFLISEKGSYITGSIFDINGG FY >gi|325480958|gb|AEXN01000015.1| GENE 34 34401 - 34715 332 104 aa, chain - ## HITS:1 COG:no KEGG:Apre_0523 NR:ns ## KEGG: Apre_0523 # Name: not_defined # Def: UvrD/REP helicase # Organism: A.prevotii # Pathway: not_defined # 1 99 1022 1120 1121 109 58.0 3e-23 MGFFNSKIIKDIKEKSPLIRKEESFLRKIDNFYVNGQIDIMFEFEDHIILMDFKTDSYKR EGFYDKQLEIYKDSIEEALGKKVSKSYIYWYNFKEFEQVNKNHH >gi|325480958|gb|AEXN01000015.1| GENE 35 34730 - 37795 3109 1021 aa, chain - ## HITS:1 COG:BS_addA KEGG:ns NR:ns ## COG: BS_addA COG1074 # Protein_GI_number: 16078127 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Bacillus subtilis # 7 991 12 1071 1232 382 30.0 1e-105 MSKFKPTDDQKKAIEIRDKNIIVSAAAGSGKTRVLVDRVVSLMIEEKIPIKNMIIVTFTN KASVEMKDRIREKLSELLDDEKIDSSFVKKQIKAINDAFIKTLHSFCADMLRENFYLSDN LSPSFKIAADSKQALLRKDAIDELFENEYEKNDQEFIDFLHNFAKEKDDKDAKEIVLDLY DFSKSQVDPENWIKYHTSNKFDFSEFKKIIEKKVDDIIKNAEELKIFIEEKSMRKEFIQM MDEDLSYFYKLKKSVIEDEWDDSLEKFDYNLKAKTRFNKKKDDPNEDLFVKTKRNYYKDQ FTELKNIVVNTDSITKAFFDPKEEEVLAELKNLVFEFEKIYKNKKREENYLDFSDMEHEF IKLLENDDLVEKLQKQFKYIFFDEYQDSNDIQNYIVDKLKNKNNLFFVGDVKQSIYGFRN ARPELFLEKLESYEKDPNSVRINLSKNFRTDKDLIDFNNYIFDRLMTKKNSDISYKDDNH RLNYHFEFDEKYPKVSIKALNSSINEEEYLIKEIDDLINSGMSYKDIAILLRSSSKAYLI ENELKKAGIPFSSDISKISFETVEVDFFINILKYIANPKDDFTLLSVLRSEIFNFSEDEL SLISLSSDKKFFYEKFSLYEENFDDELSQKVSDFNTSFADFSYILNFSNMYDFANIIFEK SGYYDFLKARDRGYERVQNIEAFIELMDDYDKNNENSLFGFLTYIDNLKNQNKDNLKASR NLSDEEDLVRIMTIHKSKGLEFKAVILPEASKGFNTRGKSKDMLLDKDLGIGINISDWDN KIKISSIKRDLILEKLNLNDKKEEMRVLYVALTRAERKLSIIGQKDLNEKGLDKIISSDS ILDLSSYMDWILKILSEDKIMADFIDLDYKTDNFRNGAVKIDYIEEFNANTELDFTDVKD ILDGKNYDEKIYKNIKDIFSYSYENLENTNKSLKKSVTEIAKNYDLSNNGYEKSSFDDVE ISHDFRRPNFDQISLSPTQKGTLIHKIFQELEFKEYDLDSLKKEIDKLIDLGKIKKNIYP T >gi|325480958|gb|AEXN01000015.1| GENE 36 37788 - 38147 290 119 aa, chain - ## HITS:1 COG:no KEGG:Apre_0522 NR:ns ## KEGG: Apre_0522 # Name: not_defined # Def: ATP-dependent nuclease subunit B-like protein # Organism: A.prevotii # Pathway: not_defined # 1 115 1006 1119 1121 83 40.0 3e-15 MNGLIIKINEEVLKLLDEDFDGKKSDIFKISRGKVNIFTPEEEEILEKFIKKLISNYICQ IKDGNIKLNPLRENQNTYECKNCEFKSICKFDYTIDQDKFRDINKDISLAKIKKELSDE >gi|325480958|gb|AEXN01000015.1| GENE 37 38144 - 41146 2699 1000 aa, chain - ## HITS:1 COG:CAC2263 KEGG:ns NR:ns ## COG: CAC2263 COG3857 # Protein_GI_number: 15895531 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Clostridium acetobutylicum # 2 1000 3 1021 1153 276 23.0 1e-73 MIKVIMSKFPEENSLYIYKDIEKKLEKKEKSFLIVPEQYTLESDMDFIDSVKYKSVMDAK VLSFSSLISYISQRLSLKKHENLNQVSKAILLTSVLDEIDDKLKLFSNKSSDIDFVTSLS DFISNIKEYYFDHDFFDQIENNENLDAMTKLKFKEIKIIYDSYVKKLENSYIDSEDELSI IKDNIKYCDFLKNVNFYFDKFDLLSDLKLDFIKELIKIGGKITVSISLDSKYYQNHLAND MEIFDQSMRFVESIKSLDKIQIINVEKKSDILDINHLYENFEKYNPEKFWDKTSNIKIVE SISSTNEIENMALMIERLIRKGYSYSDISLVIANEDEYENLIRRIFSRMNIPIFIDKSQK MSDNHVVKTWLSLIRLVVFNFRKTDLEAFIRSDLIDFGENSLERVLVFQNYMNTRKIKGS MIFDDKYFTLDENFYKGEIKEEKKEELAKVNSIRKIILDLTNDLYEISNKNISASDIVKK IFNLIDNERIKSGFNHYQEYVKDNKIEIYEENKQIWDKFITILEQIVSIMKDSKANLRKI YKLIQKACEATTIGLIPPAIDQVLIGDFSRDRINDRKIKIFVGMTDIYFPENNNSDMIIS ENEKTSLEKEGFDLKIYKAKKNDKILLNILRMFTSSQKIIFSYSLINKNNDPMNKSTSIS DIINIFPNISYQKISTGKFDLVKYSKDLLDMKAYQILWDIKEKEKVGDREKEFVKAYLQF KKDFSKNYEFNISKNSSYDLFIKGFTYSNQKNPLDREISKKLYNKNRFSVSEIESYARCP YKYFINYGLKAKKNKNLDVDMMEIGNIVHYNMENISKDLRGIDIKNLDDKKLESLVEENF KKAIESSLEKMRANDNKNKFILSNVYGSTQKSTKKVLDQIKKGKFQIDGVEEKYGKGQKY PEVYVDDHNYLEGRIDRIDRFEDFVRIIDYKTGSTEINIKYVFNGIQLQLFVYMLSVKEK KSENLSPVASFYLPLKDEVQKIDDPVTKKQFLIFIIKRQK >gi|325480958|gb|AEXN01000015.1| GENE 38 41143 - 44205 3170 1020 aa, chain - ## HITS:1 COG:L152588 KEGG:ns NR:ns ## COG: L152588 COG0419 # Protein_GI_number: 15673303 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Lactococcus lactis # 1 1020 1 1045 1046 222 27.0 2e-57 MKPISLEMYGFMTYKNKTFIDFSKLYDSKIFIISGDTGSGKTSIFDAISFALFGEIQREG FIIDDLRSDFLNGDDQPTYVDFIFELEGKKYRVKRIPKQRAKKTRANVQVSHSVEFYKYE KDKEILISDGPQKTDKKIIDLIGLNFDQLNRVMILAQGEFSKFLKSSSDDKASLLSKIFS SYIYKDIEEKLKEASKDSKKNLEFIANKLKTEVKKNDLLDENIDDEIIELKDFSKIEKVI EDLSNDLEKEFDEKNKEKNSLSKILDDKNSKLSFYEKENEQIRLLETLNLERQEILSNKD YYENLKNELDFSQKALLIKPYYENLSDNKKNYNDLEKKFNEEKDKFKIIEKNLKDLRGKL GNIEKIENIIDQKKENIVKNDQIMKKFNELLSIEKELEKNIKNIDLSKKYKDQIEGLLEE KNQTSDNIRALSDKLLDITKDLEKINDQGHKIKDELRDYQSLYEKSLENDKKIKDLEKLE KEFLKVEADFKNIGEKLKLAEESKKSILINEFRKDLEKNGICPICGSIYDKKVEFLEVGD FDLEKIRQDFVDLKIKLKYLNEKKSDLKNSIDNKIKDPKVYEESLNEYKKSYQDLRNLYK KNLGLSDEKNKNKKKLDQKANLIESEIKDLKNKLDKLQNLDDISDLQNKYKVKKEELDVF DKNEIEKSLEKDRLYVSKEEKRIKFLSEEIKDLENKRSSSSSLILNYESDLKISKEKILK ESQIFDEKVNENFKNMDEFLKYLNLSNDLISQKEKIDLYFEKLNNISIRIEGLREYENIE YYQTDIIKEEIDNLKEKIEKTNDFLFSIRLKVEKLSESKKEINKIKISLDKSKNDDEILY KLAKVCDGSLSKVSGREKINFETFVLSYYFNKILTYANLRLKDMSDGQFKMLRKKETSDK RKNNGLDIEILDYNTGKIRSEASLSGGETFIASLALALGLSDEISGENGGIKIDTLFIDE GFGSLSDDYLEKAIRTIEKLSYDNKFIGLISHVKELKNAIDAKIEVKYSKTEGSSLKVVV >gi|325480958|gb|AEXN01000015.1| GENE 39 44202 - 45296 935 364 aa, chain - ## HITS:1 COG:VCA0520 KEGG:ns NR:ns ## COG: VCA0520 COG0420 # Protein_GI_number: 15601280 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Vibrio cholerae # 1 363 1 371 379 181 32.0 3e-45 MKLLHLSDLHIGKNIGAYSLLEDQKYCLDQILEIIKNENIDIVIIAGDIFDTSIPNSESM KVYSDFVDKIIFDLKKKIIAISGNHDSGKRLEISKSFFEKNSYYIFGSSFDKSLTFKDEF GLVNFYPIPYISLARAKNEIDPNIENFTDLYRILLKDINYKDRNVLISHCYANEKAFEDE EIEGEKPLTIGGNDAMDANLFENFDYVALGHLHRKHFVIDEKIRYCGTFMKYSFSEVRQK KSVTVVDLKDNISIKEIEIRPLNDFCQIEDYFENILKMENSNDYIEFILKDDQPIDSPMA KLKIKFPHAVSIRYKNTIDLEGYDDIEIDLENLSTMEIFQKFYKFKMDENMSEKDKEIFK KVIQ >gi|325480958|gb|AEXN01000015.1| GENE 40 45296 - 46015 697 239 aa, chain - ## HITS:1 COG:RC0754 KEGG:ns NR:ns ## COG: RC0754 COG3022 # Protein_GI_number: 15892677 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Rickettsia conorii # 1 237 1 247 248 112 35.0 6e-25 MKIIISPAKRFKHFENEKTEGLLFEEETKDLVEKLRSFSINDLANMFFCNDDLAIKAYYD YKDFDFNNLKNPAIFSYDGLVFKQFKKEDFNDLEYLNDHVYIISALYGLCKPFTGISDYR LYMDSKGIDMPGFWADKIYEKAFEDEDFIINLASAEYAKLLKKYLKKDQKLLTLTFKEDR NGKIRSIVSYTKQMRGRMLKYLINKKIKDPEEIKKISLCDYIYDPYNSTEDEFVFVRKS >gi|325480958|gb|AEXN01000015.1| GENE 41 46089 - 46883 926 264 aa, chain - ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 252 4 255 268 142 36.0 5e-34 MLSYEFMQRALLVGLMLSIIIPMIGIVMVNRRTSMIGDALSHTALSGVALGLIIGINPVF SSIIICIIAGFAIEIIRKKFKNFGDMATAIIMSLGIGLAAIMSDFTPGGTSFESFLFGSI TSVTKTDLIVVSVIFVFVLFFSLYLYYPLLYNSISPLMANLAGINSKLVSNIFTFLTAVT IGISTKTVGALMISSLMVLPVASSLLISKSYRETFIKSIIIAIIYMMAGISASFYLGIKP GGAIVVIAVIGMIISLIIQKILKR >gi|325480958|gb|AEXN01000015.1| GENE 42 46876 - 47541 254 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 220 12 223 318 102 32 1e-20 MKDIEVKDLVFSYGKDNILKNISFDLNRGDFLTIQGENGSGKSTLIKLILKDLKKKSGQI KLFGKDIEEFDDYSKIGYVPQVNDANKVAFPVTGKEFVVLNLYKKFNIFNRPTKKCYKKV YDTFEILNIENLLNIPFNQLSGGQAQKVMIARAMVNDPDLLILDEPTVGVDENSKRDFLK LLAHLNDEHKISILMISHEMDIVREFSKRQIRIKNGRIVDA >gi|325480958|gb|AEXN01000015.1| GENE 43 47542 - 48681 1546 379 aa, chain - ## HITS:1 COG:SPy0714_1 KEGG:ns NR:ns ## COG: SPy0714_1 COG0803 # Protein_GI_number: 15674772 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Streptococcus pyogenes M1 GAS # 45 374 31 315 322 149 30.0 1e-35 MKKKFLAIALVLGLFVTGCAKNNQTSNSNDSNSSNETNQSEKSTKETIYASFYPIYNLTK QIAGDKFNVESFTNLNTEVHDFEPSAKDMAKLSDAKVLFLNGAGLESWKDKVEDASKVEM VDTSKGIDLIKTEDEEDHDHEDSDHHDHEGSQEDKDSDHHGHEDKDDHDHESMEDSEDSD HHDHEDADHHDHEDEEEGHHHHHHHGMYDPHIWLSPKNGIIQAKNIADKLSEIDPENKDY YMGNFEKIKKELEEIDKTYGEKLKNKENKKFLVDHEAFSYLARDYGLTQIPLTSITSTSE TDAKTMKDSIDYVKKEKISALFYEKGGSDKNVKTLANELSLDAKAINTIEYASDDDLKAN KTYQEMIKENLELMESSLK >gi|325480958|gb|AEXN01000015.1| GENE 44 48775 - 49197 395 140 aa, chain + ## HITS:1 COG:BH0951 KEGG:ns NR:ns ## COG: BH0951 COG0735 # Protein_GI_number: 15613514 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Bacillus halodurans # 3 139 9 144 145 84 35.0 6e-17 MKAADLLRSKNIRVTEKRRIILEKIIENKDPISAEEILEKLKDDKINLDLSTIYRNLNTL EEVDLLLKNTNLDGISYFQLNTNDHKHFITCMSCNKKFILENCPIHEVEEKIEKETGFVI KGHSFEFTGICPDCQKKHKI >gi|325480958|gb|AEXN01000015.1| GENE 45 49234 - 50505 1673 423 aa, chain - ## HITS:1 COG:VCA0088 KEGG:ns NR:ns ## COG: VCA0088 COG1301 # Protein_GI_number: 15600859 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Vibrio cholerae # 5 421 6 420 424 332 45.0 1e-90 MTAKSQRKRGLTSKIFIALILGMVLGIVMHYFIPQSHIKDDIVIDGIFYILGQMFIRAMQ MLVVPLVFFSIADGCRNMGDTKTLGKVGVRIVAFYLLTTSLAIIVALSIASIINPGKGMN MKLGSNEFNMDTGEKTSMKDTLLNMIPTNPIEALAKGDMLQIIIFAVIVGLLIASMEDRL ETLGNIITEMNDLMMSMTMAVMKLAPIGVFFLIARTFSSLGYDVILSMLSYMLSVVLGLA FQLLIVYMLLLTLFVRVNPFSFLKKYFPVMTFAFSTASSNATVPLNIQTLEEIGVDKKIS SFTIPLGATINMDGTAIMQGVAVVFISNAYGIDLTLNDYITVILTATIASVGTAGIPSVG LVTLSMVLSSVGLPVEGIAMIMGIDRILDMARTAINTTGDASGTMIVANSVGSFDKEKFN RRV >gi|325480958|gb|AEXN01000015.1| GENE 46 50495 - 50728 259 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696874|ref|ZP_03305002.1| ## NR: gi|212696874|ref|ZP_03305002.1| hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01437 [Anaerococcus hydrogenalis DSM 7454] # 15 77 221 283 283 129 96.0 5e-29 MHLVKEPVLLEPLHKKIVDLTKLDAKIEEVRDSDRIDFEPAFRGIDNYYLDLLGKNTFST WEDALKDYLRREYGYDC >gi|325480958|gb|AEXN01000015.1| GENE 47 50658 - 51347 846 229 aa, chain - ## HITS:1 COG:CAC2315 KEGG:ns NR:ns ## COG: CAC2315 COG1091 # Protein_GI_number: 15895582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Clostridium acetobutylicum # 6 226 3 224 280 181 41.0 1e-45 MRINTIWITGAHGRLGSTLVRYLDPLEAEIIATDKEEVDITNQEEVNLFVDRNRPKIIIN CSGITDRLKCENDPDKAYLLNALGAKNIAIASNRVRAKLVQLSTADVFDGQTIHPYKEID KANPNSVYGKSKFLAEEFVKDFADRYFIVRVSRLYSKENNLVESIIDQGKNGLIKVPKSR YGSPTSAYELSKFLISIMDTNAYGVYHASCEGTCSFRAFAQKNCRLNKT >gi|325480958|gb|AEXN01000015.1| GENE 48 51481 - 52725 1485 414 aa, chain - ## HITS:1 COG:aq_742 KEGG:ns NR:ns ## COG: aq_742 COG0151 # Protein_GI_number: 15606133 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Aquifex aeolicus # 1 412 1 415 424 381 48.0 1e-105 MKVLIIGNGGREHALAWKISKSKKVDQIFMAKGNAGTDSFCKNIDIDPTDIKALVDFSKK EKIDLTIVGPEDPLCMGIVDEFEKNNLKIFGPNKECAKFEKSKKFTKNFLEKYEIPTAKY KSFDDFDKAKKSLKEFSYPLVIKADGLCLGKGVIICEDEKKALDTLDDIFVKKIFGDEGK TVVIEEFLKGEEASLLCLVSNNKLFPLETCKDHKQIYDGNKGPNTGGVGTYSPSKFSKKT EENIEKILKQIEDGFNDSKFSYNGILFIGFMIDKDLPKVLEFNVRFGDPETETLMPRLES DLVEIIEKTLDNTLKKEDIKWSDDFSLCVILVSEGYPLKYEKEKEIKGFDQVKDSLIFHN GTKIKNGKILTDGGRVLTINACAKDSETARKIAYKDCEKIEYENKYYRKDIGLN >gi|325480958|gb|AEXN01000015.1| GENE 49 52725 - 53351 656 208 aa, chain - ## HITS:1 COG:CAC1394 KEGG:ns NR:ns ## COG: CAC1394 COG0299 # Protein_GI_number: 15894673 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Clostridium acetobutylicum # 12 187 4 186 204 154 45.0 8e-38 MMKNSTSNFKNIAILISGSGTNLQAIINSCEKKEINGQISIVISNKHDAYGLERAKKSSI KTMVCTDNNLLINTLKKENIDLVVLAGYLKILPQSIIDQYESKIINIHPSLIPSFCGMGF YGRRVHEKVFEKGVKFTGATTHFVTKDADAGPIIYQEIVKIDQDDTIDEIAKNVLEKEHE ILTKSVRDFCDDLFYIKDNKVFVKNRSL >gi|325480958|gb|AEXN01000015.1| GENE 50 53323 - 54351 797 342 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 1 314 5 314 354 311 49 1e-83 KMSINYKDAGVDVENGQKEVELIKSIVEKTQSKNVLSKIGGFSGLFSLENLDIKNPVLVS GTDGVGTKVMLAQMMDKHDTIGIDCVAMCVNDILCQGARPLFFLDYIACGKLIPEKMEKI VKGVADGCLQAKSSLIGGETAEMPGLYKENDYDLAGFCVGIVDREKIITGEKIKKGDHIF GLKSSGIHSNGYSLVRKIVFEKEKLSLDQKIEGLETSLGEELLKPTKIYVKEVLALLDKI EINGLSHITGGGFYENIPRMIPDGLCAKIDLTNVEAPKIFSLLQKWGNLNKKDMYETFNM GVGLVFAVDKKYEEDVRKIIDENELLDLGEVVENDEKLDLKF >gi|325480958|gb|AEXN01000015.1| GENE 51 54350 - 55633 1396 427 aa, chain - ## HITS:1 COG:CAC1392 KEGG:ns NR:ns ## COG: CAC1392 COG0034 # Protein_GI_number: 15894671 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Clostridium acetobutylicum # 3 424 21 462 475 320 39.0 4e-87 MSGIVGIFSKKKYKNIFPDLYSALYAIQHRGQEAMGISLLSHERLSEIRGKGEIANNIGL DNISTLAGNVGLAHAKYMFAEDDRSLLPMPWMFYPKNSDHKNLIAIDGKFFDKNSPEEIV NNLNSKNEDEIIEYVNKLNGVYALLIVSGKRMIAVRDHYGIKNLCVGKNDDNYIVASESC AIESIGGQICHELKPGEIYIVDDDGEKSYFSKEISNSPCIFDFVYTARPDSYINGVSVYD ARIRMGEILYKEHPVDADIVVGSPDSGLISAVGFSRASNIKYERAIVRNRYINRTFILPT DSTRQKGIRIKLNPIKHLLEGKRVVLVDDSIVRGNTVKRVIEILKESGAKEVHIRIASPQ VIKEENYTFDVADKEHLISYNRSVEEVRKIIGADSLGFISLEGLREACGNKTYYENCFDG FNPLERK >gi|325480958|gb|AEXN01000015.1| GENE 52 55633 - 56115 849 160 aa, chain - ## HITS:1 COG:PAB1077 KEGG:ns NR:ns ## COG: PAB1077 COG0041 # Protein_GI_number: 14521838 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Pyrococcus abyssi # 2 150 8 157 174 137 54.0 8e-33 MKVSIIMGSLSDSPIADKVVSKLMEFGIDYEVKVISAHRALKSLEKYVKESEDESEVYIG IAGKAAHLSGVIAALTTRPVIGIPAKSSHLGGIESLLSTVEMPSGVPVATVAIGGGENAA ILAAEILSVKYDLLREKLKDMRVKMKETIDNSEYEYKANK >gi|325480958|gb|AEXN01000015.1| GENE 53 56128 - 56808 1018 226 aa, chain - ## HITS:1 COG:TM1243 KEGG:ns NR:ns ## COG: TM1243 COG0152 # Protein_GI_number: 15643999 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Thermotoga maritima # 5 216 3 202 230 89 34.0 4e-18 MNTIYEGKTKNLVEENGKYYCLFKDTMTGTDGVFDTGGNQVAGEKEGAGAECLKVSKFFF EKINEAGVKTHYLGADLDKNLMEIEKCSVFGKGLEVITRFKAVGSFMRRYGLYATEGQDL DAYSEITLKDDDREDPLITEDGLVELNILSHDEYKEIIKENKKVAKLVKDILAEYGLDLY DIKFEWGRLASTGEVVLIDEVSGGNMRAYKDGKYIEPLELSKYLGL >gi|325480958|gb|AEXN01000015.1| GENE 54 57123 - 57716 730 197 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_0684 NR:ns ## KEGG: HMPREF9243_0684 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 195 1 197 197 163 44.0 3e-39 MIKKKSFIKSILIGILLITTILFGAKYFSAKNENKIDNKLIQNRIESAKELTTLKYSYTN MGQFENSSKIYGYDLPFTQKKFIVSYDGMISYGVDLEKMDVKVSGKNINIKLPKSKVLSH EIYEDSLKIFDQKTSIFNPIKLEDYNDFSKKQKKSIEKSAEEKGILKEADKKCEKAIKDI INIDKSLDDYTINIQFK >gi|325480958|gb|AEXN01000015.1| GENE 55 57768 - 58277 635 169 aa, chain + ## HITS:1 COG:no KEGG:Apre_0506 NR:ns ## KEGG: Apre_0506 # Name: not_defined # Def: nucleoside 2-deoxyribosyltransferase # Organism: A.prevotii # Pathway: not_defined # 1 168 1 169 170 221 72.0 1e-56 MKIYLGCDLFTEGQRWQALEIQKALEKEFSDIEIYNPAQNLEINDKSAGFTTNYDILLAD YERLKNSDILIGLMDTKDLGLAAEMGIAFERGVQIFQLYTDIRLGGNDKEDKFDPMKKDI FQNDFLYINKLVTGLSYVDKNGNKFKKPKIYKRKEDLIEDLILYIKENK >gi|325480958|gb|AEXN01000015.1| GENE 56 58396 - 59187 819 263 aa, chain - ## HITS:1 COG:lin0757 KEGG:ns NR:ns ## COG: lin0757 COG1408 # Protein_GI_number: 16799831 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Listeria innocua # 9 261 8 285 293 93 24.0 4e-19 MIKTIFLIILTVILLLLSYIFYQCKWAKEVRVDIVNKKIKDEIRITQISDFHSNILKNMG YFKKKILDFEPDFIILTGDINDYGVVKKFNKAINFLSELSKLGIKIYYISGNHEEAGPMF DEFIEEIEKLGIKYLKNDGEYIEIRKEKIYIYGLSYYNYSFKNYKTNDENLNIILSHYSK NVRDNLDDSMDIIFSGHTHGGQVRFPIIGALLAPGEGYFPKYDKGLFNYKNAQLYIDSGL GNTLMDLRFLNRIQFSNITIKRQ >gi|325480958|gb|AEXN01000015.1| GENE 57 59180 - 60991 1758 603 aa, chain - ## HITS:1 COG:CAC1050_2 KEGG:ns NR:ns ## COG: CAC1050_2 COG0171 # Protein_GI_number: 15894337 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 291 590 4 305 310 276 47.0 1e-73 MKKNLKLRADNFKIKVGNVSYNREQIKKVVKKANEDLVNILLLPELCLTGASLYDGYKND DILSSCLDSLFDLKKFSENIDTLFSVGLPIKEGNKIIDMVFLLKEGEICGGFFKDNFKDH EKYIFDLPENDFVSIKGEYIRIYNKSFLEIDGVKISLSVGENEDKIIPDSLNARSNNDID IILNPSAKIRYIGSREKTEDKIKFLSQNTTYLFSSTGLGESSTDFVYEGLNIIGQNGRII KSNRDELSDYNGFFEVNRNILTEGFHLNNSSDLGQINKYPYISIDKVRYVEDAFEIASNA LIQRMEAISCKKVILGLSGGLDSTMALLFIIKAFEKMNLPKENILLYTMPAFGTSKRTKS NAYKLAEAFGIKLNEIVIKDAVNIHLKDIGHDGKIQDIAYENAQARERTQILFDKGNMEN ALVIGTGDKSEISQGFATYNGDHMSSYVVNASLTKTELRYIVGYLVEKTENEKLKEVLDD ILKTPISPELKNESEDKISQKTEDIIGPYELIDFFTYEFLENSSIEEIYQKAKAAFKDDY DSKTIKKWLKSFYKRLISSQFKRSVSVDGPDMSEKSFSPRRGYLLPSDMSSEIFMERIEK LDD >gi|325480958|gb|AEXN01000015.1| GENE 58 61087 - 62325 1618 412 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 400 1 405 405 529 61.0 1e-150 MYTVRKVTDDLYYVGGDDRRLALFENIFPIDGVSYNSYLLMDEKTVLIDSVDWSITREYI LNVSRVLGDRDLDYMIIQHMEPDHCSAIELMLHYYPNVKIIASEKAILFMRQFGYHIDDR YIEVKEGDSISFGKHEYTFVEAPMVHWPEVLMTYDLTDKVLFSADAFGSFKSNDGRLFAD EVNWDRDWLDEGRRYYTNIVGKYGTFVQAVLKKAAGLDIKYICPLHGLVWRKDFGYILDK YDKWSSYQPEEEGVLIAYASMYGNTEYAAQALASKLAERGMTNISLRDVSSTDVSYLIAD AFKYSNIVLASVTYNLGIYPKMKDFIHDMAALNVQNRAVSIMDNGSWAPTAGEKMEKFLD EEMKLIDVLPEQVNIVSSLKSAKEPDMDALVDGIFESMKKRREEVQKAKDQK >gi|325480958|gb|AEXN01000015.1| GENE 59 62338 - 64269 2856 643 aa, chain - ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 378 1 376 377 548 74.0 1e-155 MLFKTTDEHEALRKKVREFAEEKVKPIAFELDQNNEFPDEIVKEMGELGFLGIPYPKKYG GQGLDVMSYAITVEELSRVDGGVGVICSAHTSLGSWPIFAFGTEEQKKKYLTPLAKGEKI GAFGLTEENAGSDAGGTETTAELDLDGERYILNGKKIFITNAPKADTYVVFAVTTPGIGT HGISAFIVEKGMEGFTCSDHYDKLGIRSSCTAELHFDNVKVPKENLLGKEGQGFKIAMAT LDGGRIGIASQALGIAQGAYESALSYAKEREQFGMPIAHLQANTFKLADMATYLKAARLM IYSAAEMKENHERYSADAAMAKQFASDLASKITNEALQMYGGSGFIKGIDVERFYRDSKI TQIYEGTNEIMRVVVGAHTVGRAPKVKTVGSKKKSGPIAGVRKGEIYEGDPKEAVKKLVA ALKKDGYDFTVGIDPYTPIPDAERIVVAGRGIGDKENMKLIEDLAYQAGAAISSSRPVAE TLKYVDINRYVGMSGQTFKGNLYIGVGVSGAGQHLKGIKNASTIVAINNSKNAPIFNNCD YGIVGDAMEVLPLLIKELDNGEEKKPAPPMKKIKRSKPRKMAPTNPIYVDLGSGYEYNPE EGDPENGIEPGTPFDKLPDSWVSPVSGEGKDQFIKMDVPEDRK >gi|325480958|gb|AEXN01000015.1| GENE 60 64622 - 65206 643 194 aa, chain + ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 181 1 180 405 182 45.0 4e-46 MQFIKKVYDNIFWVGANDRGLKRFENMFTLPNGVTYNSYIIKDEKNVLMDGSDSSVIRTY LDNVEAALDGEDLDYIIVQHMEPDHCGSIDFILDKYPNCKFVGNQKTIKFFHQFYPNDKF EEDRFVEIKDGDELNIGKRNLKFVFAPMVHWPEVFMTYETTEGLFFSADAFGSFDVLEGH ISAKHYIKKTILGG >gi|325480958|gb|AEXN01000015.1| GENE 61 65199 - 65837 789 212 aa, chain + ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 212 192 405 405 143 38.0 2e-34 MDENRRYYINIVGKQGRMVTNLIKKVSGFEINAIFPLHGPVYDDKESIGFILDKYDKWAN FKSESKGVEIVFSSMYGNTELAADILASKLDELGVEDIKLYDVSDTDYSYIIADAHKYSN QVFVAMNYNAGLYHKMDALLRELVGTGYQNRHVSFIHNFSWGGKSLEQAKEILENGKHEY VGEDFIINSSMKDDQEKTLEDLAKAIKEDLDK >gi|325480958|gb|AEXN01000015.1| GENE 62 65913 - 67421 2214 502 aa, chain - ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 128 496 49 424 450 192 37.0 1e-48 MKETYINILNIRRMAFEHIAKIAFENRPIYDIATEVFEILPGEEASYRENIFRERAVMGE RLRMGVGLHARTADNTGAITDGLDDEDYDIKKYEPPLVSVIKIACEACPENRVEVTNTCR ACIAHPCVNVCPKNAITYTSKGSIIDQDKCIKCGKCVQACPYNAISHTKRPCAEACGVKA IKSDKLNRAEIDDDKCVACGRCITACPFGAISDKTEIYQLAKALNTNEHVYAIVAPSFVR QFGQMASPVQIKEAIKKLGFKDVIEVGLGADLTTLNEAHEYVESVPEKIPFMGTSCCYSW KLMVKKKFPEINDKISESSTPMIYSGKHIKKMDENAQVAFIGPCISKKLEARRPEVAETI DYVITYEELMGMFLAKDIDPAEIKIEEDWQDASETGRNYAVSGGVAEAVKRRIAEINPDL DVKIEKAEGLADCVKLAQMAKLGRKDGLLLEGMACVGGCVGGPGTLISELKTGKAVKQFA KESIYKSPYDNKNIPDEDKPKD >gi|325480958|gb|AEXN01000015.1| GENE 63 67538 - 67735 321 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325847076|ref|ZP_08169902.1| ## NR: gi|325847076|ref|ZP_08169902.1| hypothetical protein HMPREF9246_1127 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1127 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 114 100.0 2e-24 MKIEVCAGARCTMLGSDIIFNRLSDFVEEFNDRLYKGELDVQDIELEIEMITCNDECKKN KKMHQ >gi|325480958|gb|AEXN01000015.1| GENE 64 67803 - 68975 1121 390 aa, chain - ## HITS:1 COG:SA1515 KEGG:ns NR:ns ## COG: SA1515 COG0642 # Protein_GI_number: 15927270 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Staphylococcus aureus N315 # 65 383 220 545 554 150 34.0 4e-36 MILINLFFTKIFYESLTNPFKDRMDNIKEFNTFKENPKLYIENLKNANSLLMEENSKLED RILNIEKITSKMEEGFIYFDKNGNIKILNEASKNLLGIDKNKNLYNLVDDNSYKLAIRQM KILKKGKSLNLDLDEISIKLFIDPIIDEEIISYIVIVIDDSKNKKAEIMRREFTANVTHE LKSPLTSINGYAELIASGLVKNEDIQKFGQIINQEGNRLLNIIDDILKLSKLDEENLEEG RNNINIKYVVDSSIQRFKRISDKKNIRVRNEIDDIFIRTHESLFSDLITNIYENAIKYNK VNGQITIKYKKDERFIRLIIEDRGIGIKKEDLPRIFERFYVADKQRTRNLKSTGLGLSIV KHICDYLNYNIKAESKYGYGTSFIISIPCK >gi|325480958|gb|AEXN01000015.1| GENE 65 69067 - 69420 238 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325847053|ref|ZP_08169879.1| ## NR: gi|325847053|ref|ZP_08169879.1| hypothetical protein HMPREF9246_1129 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1129 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 117 1 117 117 142 100.0 8e-33 MKKLINKNINFITGSFIFIIFIISSLFSYNKAKKAQDEFVENSLSFLAYEDIDKNKLEEF KNSYKLDILLKGVDGKVLYNSGINKNSVKNYEFDNKYLVKNLKKSKRIRKESICEKI >gi|325480958|gb|AEXN01000015.1| GENE 66 69417 - 70076 752 219 aa, chain - ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 2 218 5 234 239 178 43.0 8e-45 MIYVVEDDKAIRNLVLYALSEKDYQVKGFEDGLDIVELVRKESVDLLILDVMLPEKDGLE ILKEIREFSSIPIIMLTARDGEYDKVMGLESGADDYITKPFSILELISRVKAVLRRSEKK DREHLNYGSIEINIKKRTVKVDGEKIDLTFKEFEMLLLFMANIGNVITREDFLLKIWGYD YEGETRTVDVHIASLRNKLKSAGENIKTVRNLGYKLGEI >gi|325480958|gb|AEXN01000015.1| GENE 67 70073 - 70690 641 205 aa, chain - ## HITS:1 COG:no KEGG:Apre_1375 NR:ns ## KEGG: Apre_1375 # Name: not_defined # Def: phosphate uptake regulator, PhoU # Organism: A.prevotii # Pathway: not_defined # 1 205 1 205 205 189 53.0 6e-47 MRTRYIEDLENIRQMEKNISDLIQLSYDRFKLYLENDQKINLEEIIDLDHDIRKYAADIE RFCYDLLALQQPVARDLRFLQMSIKLASTYKRISNHLAQAAEIILEFPLRAEEKDFVKTF IKNQKNMNLNGIQSFEDNNNELALKTIEDDEINNKLFEDCIHYLVKLTKSDLITPMELSE KVLFYKYFERLGDRLAKIADYSTRL >gi|325480958|gb|AEXN01000015.1| GENE 68 70692 - 71543 314 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 36 278 1 239 245 125 32 1e-27 MEKTKDINSNLTNNETRLKTFFGNNESNLNKNRKTIINVKDLDLFYGDFQALKKINMEIK ENEITAFIGPSGCGKSTTLKCFNRMNDLVDDCHIKGLIEIDGKDINKKNVDVVSLRRNVG MVFQTPNPFSKSVYDNITYGPKIGGIKDKDELDAIVEKSLKAASVWNEVKDKLDRNALSF SGGQQQRICIARALSVNPEIILMDEPTSALDPISTASIEELLEDLRGKYTIVIVTHNMQQ AARISDKTAFFLTGEVIEMDETKKIFNDPKDKRTEDYITGRFG >gi|325480958|gb|AEXN01000015.1| GENE 69 71554 - 72354 785 266 aa, chain - ## HITS:1 COG:SP2086 KEGG:ns NR:ns ## COG: SP2086 COG0581 # Protein_GI_number: 15901902 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 5 266 6 268 271 218 51.0 9e-57 MKNSFKILIYILSILGFAAGGVVIAYILFNGIPNISPSLFELKYSSQNVSIIPALITTFL SIIITLLVTLPIGIFTAIYLSQYAKNKFLIKAVRFATEILSSIPSIVYGLFGYLFFVDAL HLGYSLIAGCLTVAIMILPTIIRTTEEAILNVNPLQAHASLALGATKIQTIFKIIIPEAI NGILGGIFLSTGRIVGESAALIYTMGTVAKTPSSLFDSARTMAVHMYVLSTEGFHVNEAY ATAVLLLIFVIVLNFVSARISKALIK >gi|325480958|gb|AEXN01000015.1| GENE 70 72364 - 73224 1013 286 aa, chain - ## HITS:1 COG:SP2085 KEGG:ns NR:ns ## COG: SP2085 COG0573 # Protein_GI_number: 15901901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 2 281 4 283 287 256 53.0 3e-68 MKSIKEKIGEIVFLISAIMSIILIILITFFIFKSGINFVNQYGLLKFITGTKWAPTAKPA FFGIGPMILGSILVTLVSALIAVPFGLAVSIYLAYYSKKSYNFLNGLINLMAAIPSIIYG FFAMMVLVPFISKTFKTGGMNMLTASILLAIMILPTMVNISKNSLEQVPSVFYTGSLALG ATKEETIRKVMVPYAKSGIYSSIILAIGRSIGETMAVYLVIGNQPRMPESLLDGVRTLTT NIVLEMGYASGLHRESLIATGMVLFVFILLINIIFNFIRDKDQSRM >gi|325480958|gb|AEXN01000015.1| GENE 71 73225 - 74085 1125 286 aa, chain - ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 15 286 19 291 291 158 37.0 1e-38 MVKKLLLILSTLILLSSCSSKKENVGDGKNFDLTVTSREDGSGTRKSFVEQVGLIREDEK GNHEDMTTDNSMVINSTNGVLKAVGVDKTAIAYVSLTALDDSVKAVKIDGISPNKDSIES GAYKLQRPFGLAYKKDALTDLSKDFLTYVKSKSAKKLIEEDGLLAITNEKEYKSKNLKGK LTITGSSSLSSVVEKLAENYEKLNKDVEVEVLSNESLTGLKNVKDGVVDIAMISNKLEDK NLSSEVFAIDGIAIIVNKDNKEINNLSLKQLRDIYKGEITNTGELR >gi|325480958|gb|AEXN01000015.1| GENE 72 74222 - 75178 1403 318 aa, chain - ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 63 310 37 284 291 172 44.0 1e-42 MKIKNSKIVVAALSLSMILAACGNKDNKANDGSNGSNPTESSSRANEKEDGDTAKSDKED FDITVVSREDGSGTRGAFIELVGLEEEKDGEKKDLTTDEAVVQNSTNGVMQTVSQDPSAI GYVSLGSVNDNVQKVKVDGAEATEENIESGDYTLQRPFNLAFKEDKLDDLAKDFLAFVLS KDAQEIVSKEGYIKVEAKDYKAKKVKGNLTIAGSTSVTPLMEKLVEKYKDVNPDANIEIQ STGSSAGIESTISDVSQIAMASRELKDEEKDKLQVEVLAKDGIAVVVNKDDTKINDLTKD QLKEIFSGKVRNTSELSK >gi|325480958|gb|AEXN01000015.1| GENE 73 75344 - 76357 1278 337 aa, chain + ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 10 337 3 327 327 352 55.0 6e-97 MYDIKIPENYQSDKNLYKTQLLIKEIKDFFQINLSNNLNLKRVTAPLFVENSTGLNDNLS GVEEPVKFTLPEANNANMEIVHSLAKWKRYALKEYNFAMYEGLYTDMNAIRRCEEPDNTH SFYVDQWDWEKIIKDTDRNVDYLKSTVLTIFNTLRALDEYLCKLIPKRVKLLPNDIKFMT SQELIDEFPECKDSKEREKAACKKYKAVFLMQIGKVLSNGKVHDMRAPDYDDWNLNGDIL VYNPVLDDQLELSSMGIRVDAKTLKEQLKIADCEERLKFKYHNMLVNNNLPQTVGGGIGQ SRLCMFFLQKAHIGEVQVSYWPDEMREELKKKSVNLL >gi|325480958|gb|AEXN01000015.1| GENE 74 76394 - 77338 736 314 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 1 314 284 590 714 290 49.0 4e-78 MATNAFGMGIDKSDVRYVIHMNMPKDMESYYQEAGRAGRDGEKSDAILLYSGQDIVVNKY LISQSQNRNYQLVKLEKLQTIINYVNTNQCLRAFILEYFGQEAKETCNNCSNCLDDYEKI DASIDSQKILSCIYRLDQRYGTSTVVDCLKGSNNKNSNEKNLNSISTFGIMKDKSPKYIK DLIGVLVADGYIKVSGLNYPILKLNEKSKDVLFSKKKVYIRDLKEENTKEKIDKFNLNMP YDRDLFNNLKKLRLDISRKRNIPPFIVFSDASLIDMARLKPKNKKDFLKIKGVGDKKLKQ YGEIFIEEIKEFVQ >gi|325480958|gb|AEXN01000015.1| GENE 75 77341 - 78180 611 279 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 2 274 4 276 714 294 53.0 1e-79 MDILENLKKYFGYDSFRKGQEELIENILDGKDVLGVLPTGGGKSICYQLPALIKDGICLV ISPLISLMKDQVDSLIENGIDAAFINSSQDIETYTKTLREIKNNKIKILYISPERLENEF FINFIKDLNISFIAVDEAHCISQWGHDFRPSYKIIPQIYDLFDRKIQIAAFTATATSSVR EDIIKNLKLDNPFVKVTGFDRENLFFEVKKPKDKLAFISTYLKDKKDMSGIIYASTRKRV ESCYKYLKKLSYQVTYYHAGLSDKEKRKIKKILFMIGKI >gi|325480958|gb|AEXN01000015.1| GENE 76 78224 - 79045 895 273 aa, chain - ## HITS:1 COG:no KEGG:Apre_1414 NR:ns ## KEGG: Apre_1414 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 245 71 316 374 212 51.0 1e-53 MRVDLDDLKSIDFDLNTCDVRIQKSSTNPYVEYTNLYRDDYSYEVKTKFKDGNLKLSSDI KGKELYMKNKIQIVRIFLPKNKSIESIKGRVGAGDIKISDLNCKDMDLKLESGNISFNKS KITGSVSNDVGSILFKNSEIKDTNLKTRVGNIILKDSKLKADQNLENENGDIEISTKDSI KSFNINAKLNVGNFVLGNVSYRNILDGYSTGKDKNKSLNMKTKIGDILINKGEGSVMKDE DFVTSPNENSNDLSTPLDTDSNINKENDNTKNN >gi|325480958|gb|AEXN01000015.1| GENE 77 79243 - 80001 668 252 aa, chain - ## HITS:1 COG:lin2747 KEGG:ns NR:ns ## COG: lin2747 COG0101 # Protein_GI_number: 16801808 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Listeria innocua # 10 247 8 247 248 167 41.0 1e-41 MSIQNILLKIQYDGSLFEGFQIQKDKRTVQKELEEAIRKVTGEKNRIIASGRTDSGVHAN EMYINFLTAKDIRADKFHFHLKKYLPADILALSSKKVDKNFHARFSVKTKTYKYVISLEK ILHPIYRNYMEQITYKLDFDKLKQGMEILKGEHDFRAFMLSEKNDIINTIRKIDDCYYIL DNNILFLYFKAESFLHNQVRIMAGSLIELSRGKISLDDFKFYFDKNNKKRANPTLKAGGL YLDSIDYRNLES >gi|325480958|gb|AEXN01000015.1| GENE 78 79998 - 80792 786 264 aa, chain - ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 244 2 247 267 211 48.0 8e-55 MSNIAIGQYLAYDTFIHKLDPRVKLIASLLFIITIFFVQTFVGYIPFFILLIVMISVGKI PVKSLIKSIKPLVWILLITGLINLFTTSGRTLFTIFSLTATYEGLYKTIFMFVRIIMIVV STSVLTFTTSPMELTDGLEKLFSPLKRFGFPAGELAMMVSISLRFIPTLFEEAQRIKMAQ MARGADFESGNIINRAKNMIPLLVPLFINSFKRSDDLATAMEARLYRIGRERTRLNEIIM TKTDYLVLILFSLFCLIVIVKFFI >gi|325480958|gb|AEXN01000015.1| GENE 79 80785 - 81573 424 262 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 1 236 148 379 398 167 37 2e-40 KNVNLEINKHEIIGLIGQTGSGKSTLVQLLNGLLIPTNGDVLVDGVNTKEKSTRRDIRFK VGLVFQYPENQLFEETVKKDIAFGPKNMGLDDDEIEKRVKKSMAAVGLDYETIAEKSPFE LSGGQQRRVAVCGIISMNPKVLVLDELTAGLDPKGRDKIFGEILKLYDEDPELTIVLVSH SMEDVAKYVDRVIVMNKGQVFSDKSTYDTFTKTDLLSIGLDIPQVTKFMKALKEKGENVR DDIYTVEDAVSELKKYLEAKNE >gi|325480958|gb|AEXN01000015.1| GENE 80 81640 - 82473 258 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 238 1 232 245 103 28 3e-21 MIKIENLNFSYKNDSDENENIEYTNALNDLSISINKGEFVAILGHNGSGKSTLAKLLNGQ IFPTSGDIWIAGMNTKDEEKIWDIREKCSMVFQNPDNQMVATTVEDEVAFGPENLQVKNP ELRQRVDEAIKLVGMEKFVKRSPSELSGGQKQRVSIAGVIAMLSDCIIFDEPTAMLDPQG RSDVMNIIQTLNKKYKKTVVHITHYMEEAALADRIIVLNKGQVAMQGSAREVFSKVKEMK DLGLTVPQVTEIAYELKKDGYDFEKLPLNIEEFLELI >gi|325480958|gb|AEXN01000015.1| GENE 81 82542 - 83960 1398 472 aa, chain - ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 42 460 50 465 466 200 31.0 5e-51 MRIISNKDTNSKTTKRILTFGGIVLGIYIIGTVLFTFITLPNTHVNGKNVSFAPKESVIG DSVGDFDIKIKGLDDKNLSFNSKDVDYKANIPKGASLDQNPLKWPISFITKEDFEFDYKV NYDEDKLDEILKNSQFMKKVVEPKDAKLEFDGKEFKIKEEVEGNKVKYNKLKKEAISAIK TRNADIDMDESFYEHPKVFAKDKNLQKALKDANDALKLSYKFNINGFDKKIEGETLADMI EFQNGQLTLDYEKLSGYVAKIAKETNTYGKERKFNATDIGEIVVNPGVYGFKLNEKETAK AILEAFSKRKSKEIEPIYDKVGLNRYENGTDLKDTYIEVDLSRQHMWYYKDGELLISSDI VTGRLSENALTNKGVGSILSKDRNSKLKGIDFDGSDYETPVHYWMPIGWDGEGFHDAYWR SSFGGNIYINNGSHGCLNMPPSQAAKLFELVEINTPVVVYESSTNNSPNMLY >gi|325480958|gb|AEXN01000015.1| GENE 82 84001 - 84177 182 58 aa, chain - ## HITS:1 COG:SP0373 KEGG:ns NR:ns ## COG: SP0373 COG0116 # Protein_GI_number: 15900296 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Streptococcus pneumoniae TIGR4 # 6 56 331 381 385 58 54.0 2e-09 MIDDKFKNLNTWSMFIISSDEKIDKNIRRKVSKKRKLYNGGEKVDLYQYFGKKPKKDR >gi|325480958|gb|AEXN01000015.1| GENE 83 84341 - 85132 807 263 aa, chain - ## HITS:1 COG:BH1771 KEGG:ns NR:ns ## COG: BH1771 COG0116 # Protein_GI_number: 15614334 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Bacillus halodurans # 1 261 1 263 385 226 44.0 5e-59 MEKIIITTSFGLESLIKRQLIEEGYEDFEVLNGKIILKGNLDDIGYLNLNLREADRVFLE IASFEAKTFEQLFENINKIDWFDYLDIDDNFIVNARAYKSKLFSIPSIQSISEKAIINSL KRKYKISTFKKTGPRVQIEVMLEKNIVSLCLDTSGDGLHKRGYREGSVKAPLRENLAAAL VDLSFYKDDRFLFDGFCGSGTILIEAARKERNIVPGLDRDFDFTSFKFYDKKRFEKIKKE AYQKINYDKKINILGSDISKKCN >gi|325480958|gb|AEXN01000015.1| GENE 84 85244 - 85603 608 119 aa, chain + ## HITS:1 COG:PH1083 KEGG:ns NR:ns ## COG: PH1083 COG2033 # Protein_GI_number: 14590918 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Pyrococcus horikoshii # 2 119 23 137 137 127 56.0 5e-30 MLLTQTVQSGDWKNEKHVPELEYKELGEGKYEVSAFVGKEIAHPNTLEHHIAWIKVFFIP EGGKLPVEVANYNFSAHGESEIYSTPKAVGEFKADKKGTLFALSYCNIHGLWENSLEIK >gi|325480958|gb|AEXN01000015.1| GENE 85 85777 - 86469 873 230 aa, chain + ## HITS:1 COG:CAC0564 KEGG:ns NR:ns ## COG: CAC0564 COG0745 # Protein_GI_number: 15893854 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 5 230 6 230 233 209 47.0 3e-54 MNDKIIIVDDEKEIADLLELCLTNDGFSVSKAFNAKDALDLVEAENFDLMILDIMLEDMD GFSVCKKIREKHYFPIIMLTSRIDSNDKILGLTMGADDYITKPFNPLEVIARVKTQLRRS QKYNKTEKIKDDETYDIRGLLIDKKSHKCFLYDKQIQLTPIEFEIIWYLCKNQGKVVSSE ELFENIWKEKYLDNNNTVMAHIGRIRDKMNDSGRNPKFIKTVWGVGYEIE >gi|325480958|gb|AEXN01000015.1| GENE 86 86456 - 87544 636 362 aa, chain + ## HITS:1 COG:BH1809 KEGG:ns NR:ns ## COG: BH1809 COG0642 # Protein_GI_number: 15614372 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 62 359 51 351 351 157 34.0 2e-38 MKSNNRLLNSVFKNYLKKCFIITIFVAILACILIPIINNYIYNNFENAYMFYRSLYLLFP TIIIWALLIMLETYKLFKKLVSYVDELQEATNKLFDKDNTYIHLSDELSEISTKINKLKM QSIENERLANENRRQKNDLIMNLAHDLKTPLASIIGYLELLNGNISLDDEQRKKFLGIAL RKSKQLSDLINEFFEITKYNLSKIKINYSNTNLTMMLEQLVFEFKPMFEEKNLTCKVKAE KNVMISCDVNKISRVFDNLLRNACLYSFENSEIHIDLNVKEEKVEIIFENKTESIEEDKL SKIFEQFYRLDFSRNSKAGSGLGLAIAKEIVLLHKGEISAESKDNCVKFCVILPKNKKVG KK >gi|325480958|gb|AEXN01000015.1| GENE 87 87667 - 88158 660 163 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_1319 NR:ns ## KEGG: HMPREF0424_1319 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 31 162 39 172 174 132 47.0 3e-30 MKLSLKKVLSFLFVMVLMVGFSSCKKSSATANSENSAKDFVKYDDIQKEFKETVNKLNWP EGYKAPEKLDDDVNAVYQEGYGDTLASNYWECAWQEEWLKNYKNNPKRAQKAIDELEKAL SMRYLSKECCDDATRKFFTDRLDKAKSNDPSGFEENLKLNDPR >gi|325480958|gb|AEXN01000015.1| GENE 88 88280 - 89134 941 284 aa, chain - ## HITS:1 COG:CAC0948 KEGG:ns NR:ns ## COG: CAC0948 COG1307 # Protein_GI_number: 15894235 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 281 1 279 281 128 30.0 1e-29 MEKIAVLVDTGSDIDLEKSKEFGIYLMPFYVNLDGEFYKEQEELKAEDFYKWIEKNEKLP KTSIPSPGELKEKFDQIKNDGFEKLIIITISKNFTGFYNLCSQMEYDGLEIAVIDSQSVA LTSGLLAIYTKDLIKKGYEFKEIVEMVEDKKKESKIFFTIDTFKYIIAGGRVPKAFGKVG ELLNIKPIVVCDPADGKYHIVKTCRGEKKVLKEMEKLANEYLGKIDKYYMIISNGGYKKG SEILEEKLKEFKDKSTLFLTSQIAPSLGANTGPGLFGFGFLPID >gi|325480958|gb|AEXN01000015.1| GENE 89 89139 - 89912 720 257 aa, chain - ## HITS:1 COG:FN1387 KEGG:ns NR:ns ## COG: FN1387 COG2220 # Protein_GI_number: 19704722 # Func_class: R General function prediction only # Function: Predicted Zn-dependent hydrolases of the beta-lactamase fold # Organism: Fusobacterium nucleatum # 6 240 1 223 237 103 32.0 3e-22 MIEKIIITYIYHSCYSVEIGDYFIIFDYYKGVLNIPENKKVIFVSSHGHSDHYTSEILKI PNMKNYTYILSTDIAQLENDDNIIYIKNNKLGIDQLKSLYNSKNVYLIDPDQEKEIKIKN DKIRIKSFGSTDEGISILLYICGITIFHAGDLNYWAWDDYDDKTLKKEYYAFIEQVDKIK KYSIDIAFFPVDYRLKDNYYKGPKIFADNVRPQLMFPLHSGDHEKISQKFKKEIELKETI FRPIIASGQKIIVDIKD >gi|325480958|gb|AEXN01000015.1| GENE 90 90015 - 90491 664 158 aa, chain + ## HITS:1 COG:BS_yjdI KEGG:ns NR:ns ## COG: BS_yjdI COG2606 # Protein_GI_number: 16078271 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 5 156 7 158 159 112 40.0 2e-25 MGKIKTNAMRILENNNVDYEEIEYDLGGEFKSAVDAGKKSHVDLNIMYKTIATISKDNDI IIYLLRSYDSIDMKKAAKVAGVKSISILPTKNLKSKVGYQRGETSPLAMKKDYPVFIDDS AKELDKMIVSGGKCGVSLKLNPEDLAKVVNAKFENIRQ >gi|325480958|gb|AEXN01000015.1| GENE 91 90661 - 91167 247 168 aa, chain + ## HITS:1 COG:no KEGG:Apre_1349 NR:ns ## KEGG: Apre_1349 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 166 55 220 223 137 54.0 2e-31 MVILSPIFITIFDNSTSLEFFRKNLDQSNFEYGLYPNFFQDFSEKSYFEFYKNHSKKEDI ILNENNRIDFTINLIENKYILSLIALIEVIFSKYTRKNLISYFKEIRNDIVINGRRSILA NDIYAFYLSKYLVNWALDLMKIARYKDKDRFVYINDIYKLTNNLKRPI >gi|325480958|gb|AEXN01000015.1| GENE 92 91186 - 92097 764 303 aa, chain - ## HITS:1 COG:CC3033 KEGG:ns NR:ns ## COG: CC3033 COG0697 # Protein_GI_number: 16127263 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Caulobacter vibrioides # 1 302 7 308 310 153 32.0 5e-37 MLKNKKNAVIFSLIAMFLWGSAIPLIKSTYLVLDIKSYDTFAKVYLAGVRFFMAGILAFI YAKIFGKNKISIKNVNIKLVITLAILQTCLQYFFYYIGLSNTSGVKSSIIQASNSFMIVI ISLFLVPEDKISSNTIIALIIGTAGIILVNSNQKMGHGFKLTGEGFIFTSTFINALASVL LRKYSKGSDPYLLNGMALLLGSLPLIIFGRFLWVNPIILNLKALIMLFYGAFITATSFTI WTIVLQNHSANQFGVFKLFIPIFGSLLSVIILGEIFTLRLFMGLVLVLLGSFVLMKGKNK KRL >gi|325480958|gb|AEXN01000015.1| GENE 93 92105 - 92560 447 151 aa, chain - ## HITS:1 COG:BS_yitS KEGG:ns NR:ns ## COG: BS_yitS COG1307 # Protein_GI_number: 16078175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 5 147 140 281 283 88 36.0 4e-18 MQEEGKDIEQIASFIKENSKYMVSQFGVESLKYLYKGGRISKTSADIGNFLKVKPVIHIT DEGSLEVLKLERGTKRAIKVLFKNFQKNWNPDLSDQVLIGYAYYDENAKKLKEMVEEKFP NAKVSLAPIGSLIGSHVGPGMYSLSYFGVKR >gi|325480958|gb|AEXN01000015.1| GENE 94 92563 - 92970 340 135 aa, chain - ## HITS:1 COG:SPy1936 KEGG:ns NR:ns ## COG: SPy1936 COG1307 # Protein_GI_number: 15675739 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 1 110 1 110 286 66 29.0 1e-11 MTFKIITDGSSDMNVDFIKSSNITIVPMQSNMEDEVYEIIGTDLENLNKYYEFMLDDKNV STSQVNLASFEKYFEEVLKDGQDIFYIGLSDALSGTFENAQKAKEILEKNIRIEKYIFII QNKHQQVQDFCVKLL >gi|325480958|gb|AEXN01000015.1| GENE 95 92979 - 94277 1430 432 aa, chain - ## HITS:1 COG:CAC2740 KEGG:ns NR:ns ## COG: CAC2740 COG0124 # Protein_GI_number: 15895997 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 2 428 3 430 430 370 47.0 1e-102 MNIVKPQTIAGVMELLPDDQLVFDHIKQIIEETFLSYQFLPIDTPAIEKNDILFAKGGGE TEKQIFGIDSSKKDMSLRFDLTVPLARYVSEHFSDLNFPFKRYQIGKVYRGERNQKGRYK EFYQCDIDIIGNDSLSIHNDALLPKVIYDIFQKLDFKGIKFHINNRKLLNGFFESIEISD KEEVLRTIDKKAKIGDEKTKELLTELCGEDKALKLMELINNKRDNKELLEYLESLDLNDN YKLGLRELKEVYDYMIKFGIDDESIMIDLSITRGLDYYTSTVYETFLDGYESIGSVCSGG RYENLAGNFSKQNLPGVGLSIGLTRLFYQLQELGLLEKYREDFTDCLIIPMDEKLNFYAI DIGNDLKNKGYKVDIYLEDGKFKKKINYADKIGVKKVIIIGQEEYENKMVSVKNMEDGNQ VSVKIEDIGDYL >gi|325480958|gb|AEXN01000015.1| GENE 96 94291 - 94968 602 225 aa, chain - ## HITS:1 COG:no KEGG:Apre_1364 NR:ns ## KEGG: Apre_1364 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 225 1 224 224 235 55.0 1e-60 MLIISHKSKKEFTDFLDFKNIKYLKTIDNPNLDKRISDHPDLSLFKLDDKNIVVDESVYD YYKKYLKNINLIKGEKVGSKYPLDAIYNIVRFKNFYIHNNFTEKNISLYFDQKNIRHLFI KQGYTRCSMLVFNENLLTSDMGIFKKLKNILPITLLKEEKIPLDGFDQGFLGGCFGKIDE KTLLFNGNIERLNSYDIIKNIVVKENLNLLYPDTNLIDTGSLIWI >gi|325480958|gb|AEXN01000015.1| GENE 97 95084 - 95281 430 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAPYWSGRRDSNPRPSPWQGDTLPLSHFRIFSGAQRRNRTTDTGIFSPLLYRLSYLGKHY FYSIR >gi|325480958|gb|AEXN01000015.1| GENE 98 95571 - 95951 258 126 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 1 126 1 126 126 103 36 3e-21 MKFRSIHTCIYTDNDKESIKFYEDALNMHITRRKDYDEDEFSLIYMATEDGAYELELTFN HDGRKYEHGSYYGHMAFKTKEFEKAYNLHKKMGIVSQEIGGLSDRSDKFYFIKDPQGFSI EIIEEK >gi|325480958|gb|AEXN01000015.1| GENE 99 96006 - 96488 487 160 aa, chain - ## HITS:1 COG:SA0023 KEGG:ns NR:ns ## COG: SA0023 COG1576 # Protein_GI_number: 15925729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 1 160 1 159 159 177 60.0 5e-45 MNISIVSVGKIKEKYFKDAISEYEKRLKPYVKLKIFEVNDEKAPENLSKKELEIIKDREA DRILKKIKENSYIISLEIEGKSLSSEKFSKLIKDQMTYGMGKDLVFVIGGSNGLSKKISD RADFKLSFSKMTFPHKLMRLILIEQIYRAYKIINNEPYHK >gi|325480958|gb|AEXN01000015.1| GENE 100 96485 - 97117 760 210 aa, chain - ## HITS:1 COG:SP0550 KEGG:ns NR:ns ## COG: SP0550 COG0220 # Protein_GI_number: 15900463 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 208 1 211 211 161 40.0 7e-40 MRLRFKENAIPEMKENPQVFFDGKENKGRWKEIFGNDNDIYLEIGSGRGDFLVEIAKDNP NINFIGLEVNTNAFVVASRKIKENELKNVRGLIADAEKLEEIFENEEISRIYLNFSTPWP KRRHHKRRLSHERFLNRYKNIVKDKSILELKTDNQELFEASLTYFEDFSMDIIEKEENIS EEKSLYISEYERKFRNKNMPIYYIKARFNK >gi|325480958|gb|AEXN01000015.1| GENE 101 97271 - 97600 195 109 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related [Bacillus cereus ATCC 10987] # 2 96 4 97 114 79 35 7e-14 MNEEWISQIKRGTLEFAILILIKKKDRYGYDLIQTLEKYPMLQTKESTVYPLLRRLLKNN YLEAYWKDTEEGTPPRKYYKLTELGSSYLKTLEKDWLVLVENISNLREE >gi|325480958|gb|AEXN01000015.1| GENE 102 97603 - 98184 572 193 aa, chain + ## HITS:1 COG:no KEGG:BBR47_39660 NR:ns ## KEGG: BBR47_39660 # Name: not_defined # Def: hypothetical protein # Organism: B.brevis # Pathway: not_defined # 10 189 5 185 185 84 31.0 3e-15 MKNNKINDDLEKYLLQVDKNLKYMTISEKTDILSELKNSFYERLNNGQSAEYIISQMESP KDLAFSYMGDSIVKSKDFSFKNLLMAIGFYSYASLAWISLIPTLAILSISFFFSSGISVL AGVMGLFKGIIHIKPIDEMKFIFFGFELKGFLALIAGLILALLFFIIGILFWKSTITTIK FLQNKKWKLKYAK >gi|325480958|gb|AEXN01000015.1| GENE 103 98174 - 98614 423 146 aa, chain + ## HITS:1 COG:SP0666 KEGG:ns NR:ns ## COG: SP0666 COG0596 # Protein_GI_number: 15900567 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Streptococcus pneumoniae TIGR4 # 6 142 1 136 205 62 28.0 4e-10 MQNDKVKILFLHGLGQNKEAFDKTIENINFKDIENIDLIPNNSKDLTFFDLVDMLENKIK GIKKPVIICGISLGAILAMELYFRNPQKIASLILIAPQYKIPKMLMNFQNLIFKIMPEKF FKKTKISKNNMISIASSIKNLDYRKK >gi|325480958|gb|AEXN01000015.1| GENE 104 98847 - 99554 287 235 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 230 245 115 26 2e-24 MLNVENLNVYYGNIHAIKDVSLKVNKGEVVSLIGANGAGKTTTLQAISSLLEKRSGKVSF ENEDITNEKAFKITRLGIAQVPEGRRVFSNLSVLDNISLGSVATSLNEKEKEEKIKRIYK LFPVLKDRKDQKAGTLSGGEQQMLAMARAIMTNPKLLLLDEPSMGLSPLYVEKIFETIKI LKEEGSTILLVEQNANLALDISDRAYVLETGKIVKEDRAENLKNDPVVKSAYLGI >gi|325480958|gb|AEXN01000015.1| GENE 105 99547 - 100338 257 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 8 245 9 229 309 103 30 5e-21 MDKSRSILKCDNISISFGGLKAVNGFNLDVKEKDLIGLIGPNGAGKTTVFNMLSGVYQPN QGSIYLDGENITGLPVHKLSQKGIARTFQNIRLFDYLSVVDNVKLAMNKDMRYKIFDGML RLKNYWKEEREATKKALEILNILGLAAYANDSAGNLSYGSQRKLEIARALATNPKLLLLD EPAAGMNAIETESLMDTIRMIRDKFDISIVLIEHDMKLVLGICEKLYVLNHGIVIAKGDP KEVVKKDDVVSAYLGSGYGEEDA >gi|325480958|gb|AEXN01000015.1| GENE 106 100342 - 101310 1102 322 aa, chain - ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 42 322 1 281 285 310 64.0 2e-84 MDKNKKTSYMASFVLILISFAIIQILISVGIIDSYWQSIIFLLCINIILSISLNITVGNL GQITLGHAGFMSIGAYSAAIFLKTGLVQGIFGFFIALIIGGLFAFLFSLAIGVPVLRLNG DYLAIVTLAFGEIIRVVVENLSITGGAQGMAGIPTIDSFGLIFFVTVLSVVFMYSIMTSR FGRAVLAIKDNELAAESCGINTTKSKIFAFTLSALFAGVAGAIYAQTTGVIAANVFNYNK SFDILVMVVLGGMGSFTGSIISTIVLTVVPEILRAFAEYRMIIYSVILVIVMIFRPQGLM GREEFSISRQIARFKRKLKNKE >gi|325480958|gb|AEXN01000015.1| GENE 107 101312 - 102199 1120 295 aa, chain - ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 1 295 14 308 308 312 63.0 5e-85 MNFLIQFFNGLQLGSIYALIALGYTMVYGVAKLINFAHGDIIMVGAYTIFFVVQTSLFKS GLPLYLSIIPAIIACTLLGVVIERVAYKPLRNSSSISILITAIGVSLFLENLFVKFFTAN AKPVPSLFKQASLNIFGISLSFQTIFTIVLTIILTIILQIFISKTKYGKMMLAVSEDYKA SSLVGINVDNTMTMTFAIGSALAGVASLLYVSSYPQITPFMGSMLGIKAFTAAVVGGIGS IPGAVIGGFILGMIEVMTRAYLSSSYADAIVFMVLIVVLIVKPTGIFGSLEKEKV >gi|325480958|gb|AEXN01000015.1| GENE 108 102253 - 103413 1534 386 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 5 383 3 381 383 369 50.0 1e-102 MKKTKKLMALAFASIFAFAGCQAKDGESKSTENSDTVKIGAIIPQTGPVSNYGNSSEKGA LLAVEEINKNGGINGKKIEWVSYDDKGEITDSTTAYNKLKGENVAAIVGPITSKPALAVS EIAKKDKIPMITPTGTQVNITEGKDNIFRTCFTDPYQGKLLAIFASENQKAKKVAILRNT SSDYSNGIADEFKKEAEKLKLDLVADESYGDNDNDFKAQLTKIAKASPDVLLIPDYYEKI ALIVPQARDAGIKAKFIGSDGWDGVINVMDKSQLNLVDGSCFSNHFALDSADQRVKDFVK KFKDKNKEDPSAFSALSYDTVYLLKQAMEEAKSEDKEKVVEKIKNIEFDGITGKFKFNED NNPIKSASMMEIKDGAYKFNSTVKAD >gi|325480958|gb|AEXN01000015.1| GENE 109 103916 - 105589 1489 557 aa, chain + ## HITS:1 COG:FN2029 KEGG:ns NR:ns ## COG: FN2029 COG1835 # Protein_GI_number: 19705320 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Fusobacterium nucleatum # 16 551 59 600 604 178 31.0 2e-44 MMKKLDNIENFDLEVFIELIKKRLIKLLPSLYFVLVISLLTSLFLSKVVFHDSIKSSIPV ALSYQNIYQIIKGGSYFTKNGYFSLFTHFWYISMQVQFILIFYLINYLINKINNKNVRIF IFTLFSTLSLILMISLSFDENNISRIYYGIDTRINTLFIGALAYLLIDNIYKIISFIKEK NIKEKYILYGLGFLTIIVYFFVQGESLYTYRIIMPLYTLIQALLIGLLFLYEKNNLIHIN KKEMGIFKTFLYYIGLRSYYIYMWQYVVNTFISYFFASTTLPRLYAYLLEIVIVIILSEI TYLIFNRKFDLKKYFLVTVILLVILNVVSIFLPNPKEKDMKNLEKRISENKENIEKNNKK YINKDKNKEKTNQKLPNKKISKKKAYDDFDFTNEEKEFLKNISITAVGDSVLINIDPFLR EFSPNLYLDGEVGRQMTDGPGVLQAIKNSKGLGDIILISLGSNGSLTDQNMIDILNIADG RKVFFVNTVNSQSWEESINGRIKKFCDQNKNAYMVDWYKFAKGKTNLFAKDMVHPEIEGS KIYRNLIERSILNSYTK >gi|325480958|gb|AEXN01000015.1| GENE 110 105628 - 107487 2070 619 aa, chain - ## HITS:1 COG:CAC3415 KEGG:ns NR:ns ## COG: CAC3415 COG1132 # Protein_GI_number: 15896656 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 1 618 1 626 627 511 44.0 1e-144 MKNKLNSSKNNPASHGGIKRLLKYLFNYKWQMCLVIISVIVSTVCQILGMSLLQPTIDTA ILKADINGLRLNIIKMIILFSISALTSIIFSRLMVRVSEKSIRDIRNELFAKIQSMDIGF FDQNTHGEIMSRFTNDTDMLGQSLASSIPNLLQSFLLFVGTFVIMFVINFRLTILTILTI FIMLAILKRIVKKSTKLFSRNQVELGKMNGFIEETLSGQKIVKVFNFEENSKNKFNQMAD RVRELIWQANTVMGKIMPFLKNGINISYAIVCMAGAFLTIVGQMTVGTLATYLTYVRQLQ NPIATVSQQANVMAQAVAGANRIFEILDMEGEKDDGYIDLVHATIDKTGNFKEADTLTGI YAWKKVENGKALYKRLEGKIDFEHVNFSYDGKNQILKDVSFYARPGEKIAFVGSTGAGKT TITNVITRFYDIDSGSIKVDDIDINKIQKQALRRAFGMVLQDVSLFTDSIYENIRYGRLD ANDDEIKAAARMSKADSFIKRLPHGYDTKIYGNGSSLSDGQNQLVSISRAAVDEPSMLIL DEATSSIDSATELTVTDAMDNLMTGSTSIVIAHRLSTIKNSDVIMVMDGGKIIERGDHQS LMAKKGTYYQLYTGKLELD >gi|325480958|gb|AEXN01000015.1| GENE 111 107477 - 109243 2101 588 aa, chain - ## HITS:1 COG:CAC3414 KEGG:ns NR:ns ## COG: CAC3414 COG1132 # Protein_GI_number: 15896655 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 12 588 3 576 577 436 40.0 1e-122 MNSLKEFFENFKYLMPAVGQYKKNAKISMLATSIETILELVVPTIMALIIDRAVSRKDIK MTFILGGLMIVVSLICMYSGMVATKHASATSSGFGANLRKLAFGKIQKFGFEDLEEFRTS SLITRLTSDIQQIIFSVFLAVRFIIKTVVMALVAVVLSVKVSPRLSLLFLVTLPLLVIAI FFTMSKVIPGFRQFRKEFDKLNLIVQESLANIRVIKSFVRDDFEIKKMAEQNFTMYKLID KASGAMSYIGPIANVIMFGSMVSIVWFGGNEIISGQIKVGELMSFIMYSMMLLGAFLGIS MVLMQMMASSPGVVRIAEVIEHKPYMNNDEKIENLEVKDGSIDFNNVSFKYGKDSDNYAL KDINLHIKEGESIGILGSTGSSKSTLVQLLPRLYDIEKGELKIGGLDIKKYDIERLRDAV NIVLQKNTLFSGTIEENIRWGDLDASFEEVEKVAKIACADEFIKERADGYQSVLGQGGTG VSGGQKQRICIARSLLKKPKILILDNSTSAVDTKTESKIVEGINKYSKNLTKIIISQRVS SFKNCDRILVMKDGYIEDIGSHDQVYSRNDFYKKTYDMQEKGSDIDEK >gi|325480958|gb|AEXN01000015.1| GENE 112 109236 - 109685 382 149 aa, chain - ## HITS:1 COG:no KEGG:Apre_1367 NR:ns ## KEGG: Apre_1367 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: A.prevotii # Pathway: not_defined # 3 128 2 127 147 67 33.0 2e-10 MQEDKSLYIFKLFSVIRKVQGLNNQSFKDMKANGIKTAIFLFLIYEKNITQSIIVERTAV AKQTINNVIMELCEDGYIKRISDKDDKRIKILELTDKGKSYADDFLKPLNDYNENLYDRL GEKKIKQMIEDFSNLAEILCQINKEGENE >gi|325480958|gb|AEXN01000015.1| GENE 113 109781 - 110485 932 234 aa, chain + ## HITS:1 COG:BS_yojN KEGG:ns NR:ns ## COG: BS_yojN COG0714 # Protein_GI_number: 16078999 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus subtilis # 1 230 9 243 304 129 34.0 7e-30 MIDYLKELNLNDKLIDKIIEFRNSNIDSEDKDRIVKPEFKYYGEDVLKKAITAILSGKNI LLSGPKATGKNVLAQNLSYIFNRPSWDISFHVNTDYNSLVGADTFKDGKVVFRKGPVYEC AKKGGFGVLDEINMAKNEAISVLHATLDHRRVIDIPGYDKIKLDDKTRFIATMNYGYVGT REVNEALASRFMVINMPNITRENLKHLLKDKFPKLKDKYLETFIDIFESLQEKK >gi|325480958|gb|AEXN01000015.1| GENE 114 110460 - 110690 307 76 aa, chain + ## HITS:1 COG:no KEGG:Apre_1368 NR:ns ## KEGG: Apre_1368 # Name: not_defined # Def: ATPase associated with various cellular activities AAA_5 # Organism: A.prevotii # Pathway: not_defined # 5 76 230 301 301 97 69.0 1e-19 MNPSKKKSENSEISTKSVDLRGLISAIETMEIGLNPYDAIEMGLINKSFDEFERELVRDS VDSKLPKEIKESVFDD >gi|325480958|gb|AEXN01000015.1| GENE 115 110683 - 111375 755 230 aa, chain + ## HITS:1 COG:no KEGG:Apre_1369 NR:ns ## KEGG: Apre_1369 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 229 2 233 577 181 46.0 2e-44 MTDTFEKLRAMNVIWDFADDYKIFPKSYYPMDKNYKNIIEGFKFKNFRLDLFSSFFSYLK KDNPFFEEFKNITLLLLEDLSYRKLEKTNLVIKDLRKSYAKKILDKYQYKKDTDNVYEQI EKAYYGKVFNKPITEAELVRNFYGELFSIDTYKSSQVIDRLNKLFKKYFLFERFDQYNEL FDQMIKEEKPKNFDHEDLDESDIEKNIEDQFQIQSAEFNGYIYFEEKKKI >gi|325480958|gb|AEXN01000015.1| GENE 116 111372 - 112409 1111 345 aa, chain + ## HITS:1 COG:no KEGG:Apre_1369 NR:ns ## KEGG: Apre_1369 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 343 235 575 577 345 57.0 1e-93 MNKDIFIFEKSDDNKDKREDSFIEDFYGKLSISKKRQELLEKELAKGIHKSKKLYFTKGE YTDSPNARFNQKVRKKQREKTREYIEKNLSINNRAVNELTRTITNSLANYEEDELYRKNY GLLDSVNVWKAPVLNESKVFFSNNKDPKPKFQLDLLIDGSASQIKRQNLVANQAFIIANA MDKVNIPIRVSSFSTLRDYTVFNMYRDFKDKGKNENIYDFFASGANRDGLAFKTIHKLIS EDKNENVRKILIILSDGRPNDEKHNINTVNAKIKDQYVDKKAVDDTAKEIRALKNDGIQV LGVFTGEDEDIENAKLIYGSDFCRIKNLDNFSKIVSIYMKNLIAN >gi|325480958|gb|AEXN01000015.1| GENE 117 112448 - 113977 400 509 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803542|ref|ZP_02197411.1| 30S ribosomal protein S20 [Vibrio campbellii AND4] # 3 419 7 434 520 158 26 1e-37 MGQTAFMLMLVTILSKVFGFLRESVMAYYYGAGDIVAIYAVANTLPVVIANFVASGIIYG FIPIYTKAKNEEGLEAAEDFTSNIFNILMVFSMGAVIFGFIFAGAFCKLFSPDLKGELLQ TAIIFTRIIMFAIFAYLYSAVFRGYLNLKGNFFVPAVTGLIMNVIIIFFTVISGTFKNPY LLAIGCLLGNVLQYIMFPKANRDHGYRHSNKIDIHNKYIKALIMISIPVIVSSAAGEISL TVDNSMASYFFGNASISYLRYSKTLLSLITGVITVSVTTSIFPTISHLGQSGDFENMKKH LNSAIVSTMLLVIPATIGMMALAVPIIKLVYQRGAFDNKSVIVTASMLIAYAPFVIFQSF SDVIDKGFYAVGDSKSPVIIVVIQQIINVIFNFILINFFGIQGLALSTTISAGAGAILML MKFRKNFGRINFKSSLKSLIKITLLSIIMGLIALSLYEKLSVNMSYLPSLFISIIIAGLF YIVTILLARIPEVMKMVNHLYHKIIKKRK >gi|325480958|gb|AEXN01000015.1| GENE 118 114096 - 115094 1256 332 aa, chain - ## HITS:1 COG:SP0629 KEGG:ns NR:ns ## COG: SP0629 COG1876 # Protein_GI_number: 15900536 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Streptococcus pneumoniae TIGR4 # 179 328 73 228 238 85 39.0 2e-16 MANKSIRDLRRKKLREKKRKRRKNLIKIGFCALIIVGALKIDFRKKTDDIKIRKPVENRY AQANKKEEKKEEKTGAIQVATAIGFEDLKIKDDQKLDNDGYSDVMKSYVKSLKSQYCYQE PSDYSKTSVSIGNDQYIEYYGTENSFSKIKINDDFYYVNKFGLRKLNSDNENIDVIKGIV FVNKENPLPKDFNPGLDPTSKKAFDTMLIEMNREGLNVKIASDFRKGDSEEKLLDQNNPD ADDPFTSEHQTGTSFDFFTDDTKYSNKFKDTEEYKWLKDNAYKYGFIERYKKEKESITGK KQRPWHFRYVGVENAKQMYENDLSLEEYLKIK >gi|325480958|gb|AEXN01000015.1| GENE 119 115321 - 117492 2222 723 aa, chain - ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 4 679 18 696 705 450 39.0 1e-126 MDISFTQNRELSWLKFNERVLDEADEKDVELFERLKFLSIFDTNLEEFFMVRVGSLEDLS RLKKKAVDNKSNMTPEDQLLAIMKECKRLYQKKDSVYTSIINDFKSEGINIEKVSNLDKK DYETVKFFFDSKIEPILNFQVVDRVRPFPRLPNLSINVIFNLIRQRENKKDKNYFGIIYV PDKIDRYLKVSQTTIVLLEDIIREFGENVFDNYNCISKHIMSVTRNADISYDDDDYDVDL DYRSYMKDVLKRRKRLQPVRLELDEEIEDEVFDLLLEKLPLKRENVFITKSPMRAGFIYD MLADMPETLIEKYSYKNFSPQKSPLIDDNISMLEQIEKRDLLLSYPYESMDPVIRLLNEA SEDESVISIKITLYRIAKDSEIAKALIKAAENGKEVFVLMELRARFDENNNIVWSSRLEN AGCKIVYGFDNYKCHSKVCLITRIKDDKIAYTSQIATGNYNEKTAKLYTDFSFMTSNVEI GTDVKEVFDNIMIGNLDGSYKHLLVSPKPMQRKLDELIDEQIKRQKENKNGYIRLKMNSI SDRELIDKLSQASNEGVKIDLLVRGITCILPGIKNRTENIKVHQIVGRFLEHHRVYQFGK NDDCKLFISSADFMTRNIRNRMEVACPIYQESIKKQILEFLDIMFADDVKTRIMNSKGEY EKIENKKNLVAQDKFIQMAIDKAKEKNKENKSQIIPNHIKNNKENICEKENKTLFEKIKN FFK >gi|325480958|gb|AEXN01000015.1| GENE 120 117496 - 118401 1129 301 aa, chain - ## HITS:1 COG:BH1393 KEGG:ns NR:ns ## COG: BH1393 COG0248 # Protein_GI_number: 15613956 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Bacillus halodurans # 4 298 7 305 518 120 30.0 4e-27 MIYAVIDIGSNTIRLSVYKEKEGKIYNLFNEKEGASLRSYIKNGELNEKGIERLLDTLRN FKHLINNFDDIDFVYPFATATIRDSSNRSEILKRVKDEIGFDIEILSGEEESKLSFLGAN SSLEVTKGVLTDIGGGSSEIVIIEQGKVIKSTSLDIGSLSAFNDNVEFLFPNKDDKKNIE KAIEEELEERSFYQEDHDTLCGVGGSARASLKLYNEYYKLDKENFSMDRKKLKNMLKDLI DHEDKKLLDLILSVKADRVHTLIPGMIILNKIAKYFKVDKINISQTGVREGYVYNKVLGK E >gi|325480958|gb|AEXN01000015.1| GENE 121 118456 - 119202 880 248 aa, chain - ## HITS:1 COG:aq_325 KEGG:ns NR:ns ## COG: aq_325 COG0796 # Protein_GI_number: 15605845 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Aquifex aeolicus # 4 245 3 246 254 157 35.0 2e-38 MTNIGVFDSGLGGLTVLRELSKKHKANYFYLGDNKNVPYGNKSNEEIIKLSKDIVKFLIK KDIDFFVIACNTISVVAIKELREEFDKKFISITDEGIKEALNKNGDVFVMATKATCKNHA YKKIIEGRSSKKVYEESCPKLVDYIEEGILSGEKIDSQLKDYLTIANEKKIENIILGCTH YPIIKKTIEKNLTYKANIIDPAKVLARDIVFEQDKNLNIEIYMTDVNEISQDMTNKIMGK NIEIKSIY >gi|325480958|gb|AEXN01000015.1| GENE 122 119195 - 119716 424 173 aa, chain - ## HITS:1 COG:BH0061 KEGG:ns NR:ns ## COG: BH0061 COG1947 # Protein_GI_number: 15612624 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus halodurans # 4 159 112 270 287 91 32.0 6e-19 MILALNDLWDLALKDEEIFEIGKKLGADVPFFFLKKSARAQGIGEILSEFKINLDMKILL VNDGTAISSNFVYKRLKDYGTVETEKIIKGLEDSDKSIVKDFKNVMEDVVYENFPHLLDI KNRLENFGASKALLSGSGASIFAVFFDEDQINKAYQSIKDDYKFVERVSLIDD >gi|325480958|gb|AEXN01000015.1| GENE 123 119727 - 120038 329 103 aa, chain - ## HITS:1 COG:BS_yabH KEGG:ns NR:ns ## COG: BS_yabH COG1947 # Protein_GI_number: 16077114 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus subtilis # 4 101 6 102 289 85 44.0 2e-17 MERKCYGKINLSLDSLYKREDGYHEIDTIMTRISLFDKLKIKENNTNEIKIKTNSKVLSD ENIESNLIYKAWSLLKDRVKSPGVDVYLEKNIPIAAGLAGGFN >gi|325480958|gb|AEXN01000015.1| GENE 124 120104 - 121288 1034 394 aa, chain - ## HITS:1 COG:Cj0987c KEGG:ns NR:ns ## COG: Cj0987c COG0477 # Protein_GI_number: 15792314 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 14 236 14 235 321 73 31.0 6e-13 MNKEKRTSKLSYLIETIMFFTYAFFAVNWIAGSTLTPEIMAHFGIREFSQATLISNAVTL AKIIGNFAAAYVLNKLYPKKSIGLGSIFIVLGSVIAIFAPNFMIFVIGRFIMGFGGALFI VYFSPVVIEYFSPEDRPLINSLNTVCYNVGSILALLLVSPVLRHFNNWKHSLLFFAGISL ILFFLWLIFGKDFEITDKTKEKYTLKHGLKEKIAWVMPLSYFGHLTLYMVMLNIFPISNL SPIDPKTISTLFAVGGVVGTVIAVILSKKLKKRVPVIKICTLIFSVTAVFMLRAKSGFLA SVLAFSMGVLMYVPLTSFVTISQELPGMNPARLTQIMSIYWAVVYLLETIAFYFVGVLID KFSYQTGLYFAVILSFSFFIGSFFLPETSEYKNN >gi|325480958|gb|AEXN01000015.1| GENE 125 121391 - 122233 1389 280 aa, chain - ## HITS:1 COG:CAC2708 KEGG:ns NR:ns ## COG: CAC2708 COG1250 # Protein_GI_number: 15895965 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Clostridium acetobutylicum # 2 280 3 282 282 341 63.0 1e-93 MKIGVIGSGIMGGGIVEVAAKFHEVVVRDIKDEFLDKAKARIEKDYSKQVSKGRMEEDAK EKAIKNISYTTDLKDLADCDVVIEAATENPKLKKEIFKELDEVVKEGAILASNTSSLSIT DIAASTNRPENVIGMHFFNPVPVMKLVEVIRGLHTSDETNKKIFELAEEFGKQPIEVKEG PGFVVNRLLIPMINEGIGVLYDGLASVEDIDKGMQLGANHPMGPLALADLIGLDTCLAIM EVLFNEFGDSKYRPNPLLRQMVRAGDLGRKTGKGFYDYSK >gi|325480958|gb|AEXN01000015.1| GENE 126 122346 - 123683 1467 445 aa, chain - ## HITS:1 COG:AF1145 KEGG:ns NR:ns ## COG: AF1145 COG0427 # Protein_GI_number: 11498745 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Archaeoglobus fulgidus # 1 437 7 460 482 251 34.0 2e-66 MDYNKIYKQKLISAKEAAKLVKSGDYVDYSWGVLAPHDFDEAFAKEITSLNDIVVRGGVE LEKYKIFDADEKNEHFVYNSWHSLGVIRKLAGEGRAFYSPLKYSELPKYYRTSIRKPNVF VTQASPMDEHGYFNFGVSASHLYAAIENSDIVIIEVNKKVPRGLGGYENCVHIKEVDYII EGSNPEMIALGKPQPSDLDKEVAKFVVEELVDGACLQIGIGGLPTAIGNEIAKSDLKDLG VHTEMYVDSFVELSKAGIITGKKKNIDRGRQVYAFAAGSKELYDFIDNNEELCASPVDYC NGIEQISALDNFMSINSALEIDLNGTVSAESSGIKHISGSGGALDFMLGAYNSKGGKSFV TLHSSRVDKKGKRHSNIVPTLIPGTQPTGCRANTHYIATEYGMVNLKGQSLWERTEKLIS IAHPEFRDELIKEAEKMRIWRKSNK >gi|325480958|gb|AEXN01000015.1| GENE 127 123820 - 124824 1603 334 aa, chain - ## HITS:1 COG:CAC2709 KEGG:ns NR:ns ## COG: CAC2709 COG2025 # Protein_GI_number: 15895966 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 2 329 4 332 336 285 46.0 6e-77 MSENKNLWVIVETKEDGSAVNVGLELMNPGRRMADAIDEKLYAIIIGSNVDKAKEEVKEY GVDGIITVDNEVYKDYNTEVYADAIYQLVKKHSPNIILIGATNQGRDLGPRVSARLHTGL TADCTELDIDAETKEVRWTRPAFGGNLMAMILCPDHRPQMGTVRPGVFSKEAIGAKDDID VIDEDIKFEGEARTKILDFIPRDEGDDVDLVGAEFIVSGGRGLGDPKNFSLIKDLADALD GTVGSSRAAVDAGWISHSHQVGQSGKTVGPKVYIAIGISGAIQHLAGINAADKVIAINKD PDAPIFARADYGIVGDLFEVVPKLTEAIKNKKAN >gi|325480958|gb|AEXN01000015.1| GENE 128 124834 - 125646 1184 270 aa, chain - ## HITS:1 COG:CAC2710 KEGG:ns NR:ns ## COG: CAC2710 COG2086 # Protein_GI_number: 15895967 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Clostridium acetobutylicum # 1 260 1 253 259 206 49.0 5e-53 MNIFVCAKQVPDTNEIKIDPETNTLIRKGVPSILNTYDAFALEQALRIKDKDPENVKITV ISMGPPQAESMLRDTLAVGADKAYLVTDRKFGGSDTLATSYIISEAIKEVAKREGDYDMI FCGLQAIDGDTAQVGPEIAEHLDVPQVTYAYTAELNDEGIKVLKEVEGGALNIQAKLPAL VTFTKYGDEELRYPKIKNKMKAKKATIEQITFEELKENIDEKAIGLKGSPTRVKKSYTPE HKKSGEIYNDEDASVSVDKLMNALSDEKLI >gi|325480958|gb|AEXN01000015.1| GENE 129 125671 - 126105 729 144 aa, chain - ## HITS:1 COG:FN0783 KEGG:ns NR:ns ## COG: FN0783 COG1960 # Protein_GI_number: 19704118 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 144 238 381 381 170 63.0 7e-43 MATLDGGRIGIAAQALGIAEGALEKAVQYSKEREQFGRPLAKFQNTQFKLAEMAIEIEAA RHLVYKAASLKDAGENYSVAAAMAKLKASRTASYVANRAVQILGGYGYIKEYDVERMMRD AKITEIYEGTSEVMLMVVSGALLR >gi|325480958|gb|AEXN01000015.1| GENE 130 126149 - 126832 883 227 aa, chain - ## HITS:1 COG:CAC2711 KEGG:ns NR:ns ## COG: CAC2711 COG1960 # Protein_GI_number: 15895968 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Clostridium acetobutylicum # 10 227 3 220 379 275 60.0 4e-74 MKNYLGENMYKLSEDYEEMRQMFHDFAEGEVKPLAQKVDEEHMFPEETVAKMQELGFFGI PFDEEFGGQGADTLTYVLAVEEISKYCASTGVVLSAHTSLCADCINKFANDEQKKKYLTP LASGEKLGAFALTEPNAGTDASGQQTVAKLDGDEYVLNGTKIFITNGGYAETYIVFAMTD KSKGNHGISAFIVEKGTKGFDFGTLENKMGINGSSTMELIFQDCRIP >gi|325480958|gb|AEXN01000015.1| GENE 131 127333 - 128760 1787 475 aa, chain + ## HITS:1 COG:FN1536 KEGG:ns NR:ns ## COG: FN1536 COG0277 # Protein_GI_number: 19704868 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Fusobacterium nucleatum # 3 469 6 471 475 639 66.0 0 MEYNKINDEIIEKIKSAVKGKVYVGEEINEDFFHDEMPIYGQGIPDVLIDATCKEDVSEI MKICNENKIPVIARGAGSGLTGAGVAIKNGVMINMQAMNKILEFDEDNMVVRVEPGVLLS SLAQECLDKGYLYPPDPGEKNATLGGNVSLNAGGMRAVKYGTTRDYVRKMEVVLPTGEIT TFGSIVSKSSTGYSLKDLMVGSEGTLGIITELTLKIVPNPKHTVSLIVPFEDLDACISTV PKLFQNNLNPQAIEFMERDIVIASEKYIGKETFPKQMEGIDVGAYLLITFDGDDEDLIDN TLEQAAEVLVDNGAIDVLVADTPNAIRDAWAARSSFLEAIETQNKLLDECDVVVPVTKIA EYINFVNAESESYMFDVKSFGHAGDGNLHIYTLSNEEDKIDQFKDEVDKFMDVIYKKAYD LGGKISGEHGIGNGKKKYLKSFEGNINIEIMRGIKKAFDPNMILNPDKVIALLGE >gi|325480958|gb|AEXN01000015.1| GENE 132 128762 - 129115 386 117 aa, chain + ## HITS:1 COG:MA3263 KEGG:ns NR:ns ## COG: MA3263 COG1380 # Protein_GI_number: 20092079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Methanosarcina acetivorans str.C2A # 4 112 2 110 165 73 35.0 1e-13 MNYLKEFVILCICLFLGAITRSLINYPIPEPVYGMIYLFIALHFNIIKSEDIKQTSDGIL KNLAFLFVPAGVGVLAHLDLIKGNIFQIIIIVILGTIITMALTGLLVQFLQRRKNAR >gi|325480958|gb|AEXN01000015.1| GENE 133 129105 - 129797 732 230 aa, chain + ## HITS:1 COG:MA3262 KEGG:ns NR:ns ## COG: MA3262 COG1346 # Protein_GI_number: 20092078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Methanosarcina acetivorans str.C2A # 7 230 15 238 238 166 41.0 2e-41 MLDNQYFGIILSFAAYEIGKWINQKLKTPLANPLLIAILLIIGFLSITGIDYEYYKKGGD FIAFFIAPATVAMVLDLYANIETLKKNIIPIFVGVGSGTIFSFIIAMFLSKIFQIDRNLI SSLLPQSVTTAIAISLSDEYQGIIGLTAIAVVIRGVSGAVFAPLVMKIFKIKDPVAQGVA IGTSSHAVGTSQARLMGEVQGAMSGLSIAVAGITAVIIMPIAMKIFEFIF >gi|325480958|gb|AEXN01000015.1| GENE 134 129831 - 130223 456 130 aa, chain - ## HITS:1 COG:no KEGG:FMG_0082 NR:ns ## KEGG: FMG_0082 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 123 1 124 127 70 37.0 2e-11 MLDLTKLIVEYYQGKNLSIEEIADQMDRAKVEVIENFLDNKLYVKKRNGKIELFDVEKIS RSIKNAARNGNIELNTSDVSILKNDLEKIIKKNHHRILPTATIKEYVENILEEDGYKKVL ESYTSYIKSK >gi|325480958|gb|AEXN01000015.1| GENE 135 130261 - 131760 2039 499 aa, chain - ## HITS:1 COG:CAC2701_3 KEGG:ns NR:ns ## COG: CAC2701_3 COG0516 # Protein_GI_number: 15895958 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Clostridium acetobutylicum # 205 484 1 280 280 378 64.0 1e-104 MQIIGEGLTFDDLLLVPGPSEVLPNEVSLKTNLTKKIKLNIPLMSASMDTVTESKMAIAM ARQGGIGIIHKNMSIEEQAKEVDRVKRSEHGVITDPFYLKADNILKEALQIMANYRISGV PIVDDQMTLKGILTNRDVRFQNDENVKIDDIMTKDGLIVGHVGISMEDAVKKMESGKVEK LPIVDDDYKLKGLITIKDIEKSRQYPNSARDEHDRLLVGAAVGITQDMMDRIDALVEAKV DVVTVDTAHGHSKGVMTAIKKIKAKYPNLQVIAGNVATGEATKDLIEAGVDAVKVGIGPG SICTTRVVTGVGVPQISAIIDCVKAAKEYEIPVIADGGIKYSGDITKALACGASVIMAGS LFAGTEESPGETIVFEGKQYKEYRGMGSLSAMKSGSSDRYFQNETKKFVPEGVEGRVALK GYVGDVIYQLLGGLRSGMGYVGAANLNELEEKSKFVKISPATLVENHPHDIQITRESPNY TKNKIKRLDFIPIFYFALF >gi|325480958|gb|AEXN01000015.1| GENE 136 131769 - 135437 4266 1222 aa, chain - ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 1 945 1 962 985 750 46.0 0 MTNSVKRVYVRKKDRFDYKSKEVKKEIENLLKIKLGKLNIYNRYDLQISDENLDKAINNV LSERNLDYVYAKDEAKKLENSFESALAVEYLPGQFDQRRQGVIDTLNLILDEKTDCKTAT VYEFSKLNENDLKKIENYLINPVDSHKINLKEMPESLDIKREKNLENEVYNGFIDYSDEE ISDFLKDHDLAMDDNDLKMVRDYFKKENRDPNETEIKILDTYWSDHCRHTTFNTNLDIDI KAKTSLDKAIRNSFDKYLKMRDELNIKKPINLMSFGTILTKYMRSRNEFDDLEVSSEINA CSVYVKVRVEKDGKESLEDYLLMFKNETHNHPTEIEPFGGASTCLGGAIRDPLSGRSYVY QAMRITGAGNILEDVDKTMEGKLPQRKISKLAARGYSSYGNQIGLATGFVKEIFHEGYKA KRMECGAVIAAAPKENVKRITPKVGDIVLLIGGRTGRDGIGGATGSSKSHKITSIKTESA QVQKGNAPEERKLQRLFRREEVSKLIKKCNDFGAGGVSVAIGELYDGIDIDLSKVKLKYA GLKPSEIAISESQERMAVLIDKNDREEFEKYCREENVEASLVGKVTDTNRMRMFYDDKKI ADISYDFINTNGADRSAKVEFVSEDVPKYLKEKSSDPKYFYEKIKDLNVISQRNLIEIFD STIGQNTVLQPLGGKKQVNPSQAMVARIPVLEGVSKTASIMTYGFDPFISEKSQYLGGYY AVIESIAKLVSVGSDLEKIRLSFQEFYEKMDNSKAWSKPLKSLLGAFEVTNFFKMPPIGG KDSMSGNFEELKVPPTLISFATTTEDIENIKSNDLKGKGKIGLVRAKYNSDMTLDLDHYK NLLEKLIKAMREGKIITSIALDNKGILANIYEQALGNSNFTLDFDNLYNPLFGSFVVEYV EDLDFVEKIGEFSDDLIVNGEKLDTEKLEKSYLNELDQIFTPKEEIPYEKIDQKEMEVSL KSKKPVEKVKVSILAVTGTNCEWDTRKVFEKYGAEVKINLFKNLDKESIEESIENLAKSI KSSQIFAIPGGFSMADEPDGSGKFLANIIRNEKIKDAIEYMLDENDGLIIGICNGFQTLI KTGLLPYGKIKEIEEDDPSLTYNTNDRHISTFVDTKILNNKSPWTRGLDLDKIYKIPISH GEGRFIVNEEKYKDLLENGQIFSVYDTNPNGSDYNIEGILSKDGKILGRMGHVERLDSDL YKNIYHIEEQKIFENAINYFKK >gi|325480958|gb|AEXN01000015.1| GENE 137 135448 - 136953 1712 501 aa, chain - ## HITS:1 COG:CAC1395 KEGG:ns NR:ns ## COG: CAC1395 COG0138 # Protein_GI_number: 15894674 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Clostridium acetobutylicum # 2 501 4 499 499 463 50.0 1e-130 MRALISVTDKKDVEKLSKGLDQLGVEIVSTGGTYKKIVENGVDAKEIEEITNFPEILDGR VKTLSPYVHGGILYKRDDENHKKTVAENNIKDIDIVVVNLYKFEESLKTNDIDNIIENID IGGPTLIRSAAKNHKDCIILTDPSDYDEFLEKLEKNDLDLAYRRYLAMKAYSLTAYYDSV ISRFFKDLTKKDCQYKTYGLRKIEDLRYGENPSQSASLYEDTYAKGLLKDIEILHGKAMS FNNYNDLNVALELAKELGENSCVALKHQSPCGAAIGENAFDAYKKAYEADSLSIFGGIVA LNGVVDEKTASMMSEIFLEIVAANDFTKEALEILSKKKNIRLIKVDLSKDFVKEDVKYLE GKVLVQDRDTKEDDFEVVTDIKPDKKDIDDLKFAMTVVKYTKSNAIVIVKDGKTLGVGCG QTSRIWALESIKNNHPDVDFTGSIMSSDAFFPFDDCVEFAHKIGVKSIIQPGGSIRDKDS IDKCNEYKMSMVFTNNRHFRH >gi|325480958|gb|AEXN01000015.1| GENE 138 137025 - 137162 95 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212697473|ref|ZP_03305601.1| ## NR: gi|212697473|ref|ZP_03305601.1| hypothetical protein ANHYDRO_02043 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1204 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_02043 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1204 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 45 1 45 45 70 100.0 3e-11 MRFIFKVKKFVNTILSMKKIERLRPFCVFLCPNMSMDVVLFCQGS >gi|325480958|gb|AEXN01000015.1| GENE 139 137290 - 138528 1267 412 aa, chain - ## HITS:1 COG:BS_yqjH KEGG:ns NR:ns ## COG: BS_yqjH COG0389 # Protein_GI_number: 16079444 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Bacillus subtilis # 3 385 6 385 414 243 36.0 7e-64 MLRTILHSDMNSCYASIEAKLNPKLKNKAMAVCGDPRNRHGIILAKSQEAKIMGVKTGEA IWQAKIKCPNLILVPPHYEKYLEFSRKARKIYYSYTNRVEPFGLDECWLDVSESLKLFGS GGEIANQIRERMKKELGITVSVGVSFNKVFAKLGSDLKKPDATTLIKKENFKEIVWPLDI SSIIGIGKATKRKLNGIGIYTLGDLAKTDSDAIRGILGINGLYLWQYANGLDDRPVKDYS YRELIKTIGNSSTLVEDLYTNEEVYNIFQILSLNVSKRLREANLSSMGVKIFVRDNNLFS YEFQSPINNPTQSSIILSEKAIDLFKKKYKWNFPIRALGLRAINLVDNKIPAQTDIFSDY KKIVKKENLDKAIYDIRKKYNKDVLTFASLKNNKKFPKDKTEIVTLPNGRIR >gi|325480958|gb|AEXN01000015.1| GENE 140 138671 - 139069 587 132 aa, chain + ## HITS:1 COG:no KEGG:Apre_0223 NR:ns ## KEGG: Apre_0223 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: A.prevotii # Pathway: not_defined # 1 126 1 126 129 156 69.0 3e-37 MSFGTKLRQLRESKNLTQDQLAKLVGVSLKTISRYEMGESKPRYRKVYDKLAEVLDTSHD YLVTDEDNFILDAREKYGYKGAKDAKEMVDGVIGLMAGGEIDEKDKKAILDSIQEAYYIA KNKNKKYNPHKD >gi|325480958|gb|AEXN01000015.1| GENE 141 139078 - 139629 576 183 aa, chain + ## HITS:1 COG:no KEGG:Apre_0222 NR:ns ## KEGG: Apre_0222 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 172 1 172 179 232 73.0 4e-60 MSFLYDQIYEDVKNLIKKYDSRNPREILIQRGVNIIAFKENTKLLGMYKIIKRNSFVFYN PFVDKRIQNMVFAHELGHDIYHRDMAKNENLIEYELFDINSEMELCANIFAAHLLLDENQ LLKDIKEGYTYNQLASIYNVNVNLMIFKLNEMHRMGIKIRKEEADSRFFRDINGKDMTNH EIY >gi|325480958|gb|AEXN01000015.1| GENE 142 139616 - 140179 562 187 aa, chain + ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 7 187 2 185 188 140 38.0 9e-34 MKYIDEIINNPVKLSHYIIENRIGNNINACDMTAGNGYDSKFILDKKNPKILYAFDIQDL ARKNTLDLIGNNSNFKFILDDHKNVANYISEKIDLFIYNLGFLPKGDKSITTNYKSVIGS LKSSLKLLNKNGLILMTFYPGHDEGKNEAKYVGEFLKSLDQKLFQVIKYDFYNQINNPPY LVSIRKL >gi|325480958|gb|AEXN01000015.1| GENE 143 140225 - 141559 1296 444 aa, chain + ## HITS:1 COG:no KEGG:Apre_0745 NR:ns ## KEGG: Apre_0745 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 1 441 1 430 435 354 47.0 5e-96 MKKRRFFTFAVISILLILAFLNFTSPKNANKIDLPSLEDKKIEDLSKDQYLEDFDFAYNV LETYYPYFDINKKVNNIDWLEKKDSYRKYIGNSKNDVDFSLRMNKILYELNNDHTQLIDQ NQAVYMYINYYKMPENDWRHDISHIYEKENVRRRYRLDNKKINNYLEYNQYEIMSKINPK DILVGKSKEGFSNIENLNEENISTKEINKDLAYIKINSMLNYDYSKKDHKKIKSYLKKNK NKKALIIDIRGNTGGDSRYWQDFLLPSIIDKPYSTNYYSFIKNGDLNKKVISQEKYKEGL SEFLNESNFSNETKEILSKFDYYTNYPILVNPSEDSIKFKGHIYLLIDSTVYSSAEMLAS FCKETKLATLVGSQSKGDGIGTDPLQIDLPNSGYVLRFPKEIGLTESGYINEIEKTNPDI NIDSNRYDDIKDQPIIQKIIEIEG >gi|325480958|gb|AEXN01000015.1| GENE 144 141638 - 142195 622 185 aa, chain + ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 1 184 1 186 187 140 52.0 2e-33 MSLFSILILAIGLSMDAFAASICQGLQIKKTTIKDTFSIGLCFGIFQGLMPILGYFLAAS FANSIKAIDHWVAFVLLFIIGFQMIKESRDASCEISHGLSLKSLLSLGIETSIDAMAVGV SFAFLDVNIFSSSLIIGFTTFLLSSIAFKIGNKLGMRSKQISELIGGIILIILGFKILIE HLFFQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:41:41 2011 Seq name: gi|325480935|gb|AEXN01000016.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00046, whole genome shotgun sequence Length of sequence - 37899 bp Number of predicted genes - 24, with homology - 22 Number of transcription units - 10, operones - 5 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 25 - 59 -0.9 1 1 Op 1 22/0.000 - CDS 141 - 1403 1853 ## COG0014 Gamma-glutamyl phosphate reductase 2 1 Op 2 . - CDS 1372 - 2166 1081 ## COG0263 Glutamate 5-kinase - Prom 2263 - 2322 6.4 - Term 2202 - 2242 -1.0 3 2 Tu 1 . - CDS 2340 - 2861 762 ## CLL_A0759 putative tryptophan transport protein - Prom 2959 - 3018 10.4 4 3 Op 1 . - CDS 3179 - 4210 1000 ## COG0077 Prephenate dehydratase 5 3 Op 2 . - CDS 4203 - 5279 1381 ## COG0082 Chorismate synthase 6 3 Op 3 . - CDS 5281 - 6291 1455 ## COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase - Term 6312 - 6351 6.8 7 3 Op 4 . - CDS 6366 - 6467 67 ## - Prom 6491 - 6550 9.9 8 4 Op 1 . - CDS 6561 - 8183 2033 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase 9 4 Op 2 . - CDS 8191 - 9444 1391 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 9469 - 9528 10.0 + Prom 9415 - 9474 7.5 10 5 Tu 1 . + CDS 9547 - 10872 1536 ## COG2252 Permeases + Term 10889 - 10919 1.2 - Term 10877 - 10907 1.2 11 6 Op 1 . - CDS 10916 - 11215 613 ## COG0011 Uncharacterized conserved protein 12 6 Op 2 . - CDS 11224 - 12510 1416 ## COG1362 Aspartyl aminopeptidase - Prom 12661 - 12720 6.7 + Prom 12469 - 12528 14.7 13 7 Tu 1 . + CDS 12614 - 13186 606 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 13192 - 13219 0.1 - Term 13227 - 13262 2.0 14 8 Op 1 4/0.000 - CDS 13271 - 13858 528 ## COG0218 Predicted GTPase 15 8 Op 2 18/0.000 - CDS 13855 - 16185 2886 ## COG0466 ATP-dependent Lon protease, bacterial type 16 8 Op 3 24/0.000 - CDS 16231 - 17439 291 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 17 8 Op 4 . - CDS 17443 - 18030 721 ## COG0740 Protease subunit of ATP-dependent Clp proteases 18 8 Op 5 . - CDS 18065 - 18451 563 ## Apre_0373 trigger factor 19 8 Op 6 . - CDS 18547 - 19392 1310 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 20 8 Op 7 . - CDS 19446 - 20771 1351 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 21 8 Op 8 7/0.000 - CDS 20771 - 21706 1205 ## COG4856 Uncharacterized protein conserved in bacteria 22 8 Op 9 . - CDS 21690 - 22514 710 ## COG1624 Uncharacterized conserved protein - Prom 22536 - 22595 12.4 - Term 22585 - 22617 3.2 23 9 Tu 1 . - CDS 22637 - 37111 14533 ## FMG_0186 hypothetical protein - Prom 37266 - 37325 10.4 + Prom 37372 - 37431 17.4 24 10 Tu 1 . + CDS 37680 - 37874 107 ## Predicted protein(s) >gi|325480935|gb|AEXN01000016.1| GENE 1 141 - 1403 1853 420 aa, chain - ## HITS:1 COG:TM0293 KEGG:ns NR:ns ## COG: TM0293 COG0014 # Protein_GI_number: 15643062 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Thermotoga maritima # 12 420 1 415 415 395 49.0 1e-109 MEQSLKEKLIKMGELSKKAKKDFVKLSTKDKNKILENIKISLEENRQNILAANKKDYDKG LSNNMAEGLLDRLKLDDDRIDSMILSIDQMIKLPDPIGKMTDVRTLENGLLLGKKSVAIG SLAMIYEARPNVTLDASILAIKSSNTIILRSGKEAINSSLAIAKAIREGIKNTGFDENIV QIIDDTSRDSSTGLMQLNGYVDLLIPRGSASLINAVVKNASVPTLETGVGNCHLYVDKYA DIEKALKIFENGKTQRIGVCNALESLVVHKDIDQSFYDGLNKIVEKYKLKVHACKNSIEK IKGAMPASDEDYGKEYLDYEFSVKEVQNIDEAIDHIYKYSTGHSDAIITEKIDKANKFVN QVDSACVYVNASTRFTDGSEFGFGAEIGISTQRLHARGPVGLNELTTYKYVILGEGQIRE >gi|325480935|gb|AEXN01000016.1| GENE 2 1372 - 2166 1081 264 aa, chain - ## HITS:1 COG:CAC3253 KEGG:ns NR:ns ## COG: CAC3253 COG0263 # Protein_GI_number: 15896498 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Clostridium acetobutylicum # 3 259 6 262 267 223 50.0 3e-58 MREFSNELKKIVIKVGSSSVSHENGGVNIERIEDLAKEIVNLENKGIKVILVSSGAIATG SNRLNVKRPRNDISKKQATAAVGQVTLMNTFLKAFAEYGYSIGQILLTRMVETDKVMNVN AKNTINDLLEMGVIPIVNENDTISTYEIDFGDNDTLSSVVARLVDADLLMLLSDIDGLYT DDPRINKDAKLVKEVNIIDEKLRAMGKDSYSNIGTGGMATKINAANLCMEKGIDTIIANS NDLKNIRKIVKGEEIGTIFKRKTN >gi|325480935|gb|AEXN01000016.1| GENE 3 2340 - 2861 762 173 aa, chain - ## HITS:1 COG:no KEGG:CLL_A0759 NR:ns ## KEGG: CLL_A0759 # Name: not_defined # Def: putative tryptophan transport protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 1 161 1 161 172 89 38.0 7e-17 MKTRTITQASILLAIGTILHLIPGFVGMVKPDFMLVCVFTIIILNKDLKTALAVGVAGGI LAGITTSAPGGFLPNFVDKIISSLFVYVAVKFLEKINMENIFTIGSLYFLGTGISGLVFL SLMNLAGALPEGMGLGFMFVSLVIPTAGVNIFVGLFFDKIMNMYNRKLAMTIG >gi|325480935|gb|AEXN01000016.1| GENE 4 3179 - 4210 1000 343 aa, chain - ## HITS:1 COG:VC0705_2 KEGG:ns NR:ns ## COG: VC0705_2 COG0077 # Protein_GI_number: 15640724 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Vibrio cholerae # 66 323 1 265 278 140 32.0 4e-33 MNKDYLLKELEEDIEVEDLRKLDLFLKEKYKDFLLKKYPGDFSKYLEKKVISENFPNFGK IALGGARGSYADQVGHIVFPNGDIKYFKRFDQILDAIDENICQFGILPLENSSYGSVKEV YNLMLERNFYILGNYKLDIRHYLLGNSLSKISDIKEVYSHPQALGQCRKYTLEHGFIQNE YYNTALAAKFVKEKNDKKLAAIGSKFCANLYGLKILDGNIQNVSNNYTRFIIVGKDLKIY DKADQISVRLKALDRPGSLFDIVEKFKILDVNMTKLESSPIPGSDFEFVFYFDFEGSIRE KKIRILLDFLKENAKDFEFMGSYIDFNKAFDKDNKAIYNKNNL >gi|325480935|gb|AEXN01000016.1| GENE 5 4203 - 5279 1381 358 aa, chain - ## HITS:1 COG:CAC0896 KEGG:ns NR:ns ## COG: CAC0896 COG0082 # Protein_GI_number: 15894183 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Clostridium acetobutylicum # 1 356 1 356 356 321 45.0 2e-87 MGQSFGKNLKVTIFGSSHQEYIGVVIDNVKPGFEIDMVKLDDFMQRRAPGKSRFTTKRKE SDKAIFISGLRENKIISKTITALIKNNNFKSKDYNNLNDIPRPSHADYTSFIKYGKDMDM NGGGPFSGRLTAPFCLAGGIAKQILEEKNIKIASRIKNIGGIYDKSLDLANPPMDELEKI SQKEIPVLDEKKEEEIRKLLEDVRSEGDSIGGICQVFGENIPQGLGDPLFDSFEAKISYL SFGIPALRAISFGEGLNSINMRGSAHNDQFELENGKVKTRTNNAGGIVGGITNGMPVVFD LIFKPTPSISLKQKSFSIREKKEKDLLIKGRHDPCLALRTPPIGEAILALTVLDYLYE >gi|325480935|gb|AEXN01000016.1| GENE 6 5281 - 6291 1455 336 aa, chain - ## HITS:1 COG:CAC0892 KEGG:ns NR:ns ## COG: CAC0892 COG2876 # Protein_GI_number: 15894179 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Clostridium acetobutylicum # 1 332 1 332 337 361 56.0 1e-100 MIIKLKNGAKENEIQDLIKEIEEMDLKVSKAVGSNTTILGLLGDTSKVSKEDMKSKKIVD DVIRIQEPYKKANRKFHPEDTIITLDNGTQIGGGSFVYMAGPCSVESEDQVVSIAKKIKK SGATILRGGAFKPRTSPYSFQGYGKKAIDYLVKAKEETGLALVSEIMEINQLKYFDDIDI LQVGARNMQNFDLLKALGETDKPILLKRGLSATYEELLMAAEYIMSRGNTKVILCERGIR TFETATRNTLDVTAVPFLHEKTHLPVILDPSHAAGISRYVKDLSLSAAAVGADGLMIEVH ENPAKAFSDGAQCVVPDGFDKILKASQKIHDLRKEI >gi|325480935|gb|AEXN01000016.1| GENE 7 6366 - 6467 67 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKNLSLAQISFYFFNFTFSKSKAIYHVQNPKTL >gi|325480935|gb|AEXN01000016.1| GENE 8 6561 - 8183 2033 540 aa, chain - ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 3 537 2 527 538 273 32.0 8e-73 MKQTVYVTGHKNPDTDSICSALAYANLKNRLGHTNAIPIRLGHVNQETQFVLDYFGVKAP LHKDSMKLQIKDIDYDNSYNVDESLPIRNAWSIIQENKLNSLFVVDDDEKLIGVASLSNL THSYMEVWDDRIIGRTHTPIENIVDILSAKLIVGPKNPRAFTGKMMVYAMNEKDSPKNSL VGDGDLVITGNRLEAQEYLIKKNISLIILTNGSTMKEELIKEAEENNITIISTEYDTFMT ARLLPMAVPIANVMSTENLVYFSPEDTVDTVREVMGKTRFRSYPIIDARGKVLGAISRYH LISDEKKKLILVDHNERNQSVDDIDYADIIEIIDHHRVANVVTNQPLFFRAEPVGSTATI VAKMFFESGIRPTKEIAGLLSAAIISDTLLFRSPTTTETDKRVLNRLTKIADINPEEFAL KMFKAGTSLKNRSPEDLIDGDVKAFTIGDDKIRVGQVMTMNPEELDPIKDKLVSLMRKKI NSKGENTFVLVLTDIFNQKSELLVVGNYLSDIENVFGNKVKNGTISAPGVLSRKNKLYQN >gi|325480935|gb|AEXN01000016.1| GENE 9 8191 - 9444 1391 417 aa, chain - ## HITS:1 COG:FN1486 KEGG:ns NR:ns ## COG: FN1486 COG1253 # Protein_GI_number: 19704818 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Fusobacterium nucleatum # 19 412 17 417 426 242 37.0 1e-63 MTTKNIIELIVMFFGILLSGFFSSSETAITSINKFKLRQLEEKEVKNAKLLRKLVEDSQN TITTILVGNNIVNILTTTIATLFFTDIFGGAGAAISTVVVTITVLIFGEITPKLAAQINS EKIGLRFAKPIYIISLFLKPLVFLLGLFTKYLTKKMSAGSVNSDMVTEEDLKTIVDVGEE QGVINNEESEIINNVFDFGGSFASDIMTPRTNMEAIAIDSSKKEFDEFLIECKHSRIPVY GESIDNIVGVLHMKDIVTFVAEGREVILKDMLRQTFYAYENMNIIDLFKSMKKMNVSLAI VVDEYGGTEGLVSIEDIIEELVGDIYDEYDPDDEKVYKVSDNEFIVDASMHINDFNDYFN RNLQEVKNDSIGGLVIDYLNRLPKSGDVVKVDDVTLICEKVERYKINLLRVKFNSES >gi|325480935|gb|AEXN01000016.1| GENE 10 9547 - 10872 1536 441 aa, chain + ## HITS:1 COG:VC2278 KEGG:ns NR:ns ## COG: VC2278 COG2252 # Protein_GI_number: 15642276 # Func_class: R General function prediction only # Function: Permeases # Organism: Vibrio cholerae # 9 437 1 428 430 372 51.0 1e-102 MEKNSNQSLANKIFRLKDHKTDVKTEIMAGITTFMTMSYILAVNPQILGDAGMDKGAVFT ATIISSIIAILIMAFYANLPFALAPGMGLNAFFTYTVVMTMGKSWEFALAAVFIEGIVFI ILSIFNVREAIFNAIPRSLKTAVSVGIGLFIALIGLLNSTVIVKNDVGLGLGNLVSKESF IFFIGLLIMAVLTARKTKGALLIGIVISTIIAIFTGVSKLPEGGIIQLPPSLSPIFLKLD FSSMLSFEMFSVVFAFLFVDLFDTVGTLTGVATKAKMLDENGELPNAGRALFADSIGTTL GALLGTSTVTTFVESATGVAEGGRTGLTALSAGFCFFLSIFFYPLITIIPAQATAAALVM VGLFMIDSIVDINFGDFTESFPAFMTIIMMPFAYSIAEGIAFGMISYASVKLLTGKGKEV SPLVYVLALVFLLRYIFPLFG >gi|325480935|gb|AEXN01000016.1| GENE 11 10916 - 11215 613 99 aa, chain - ## HITS:1 COG:CAC2786 KEGG:ns NR:ns ## COG: CAC2786 COG0011 # Protein_GI_number: 15896041 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 99 1 99 100 97 49.0 6e-21 MAVLELTVVPIGTKETSVSKYVAGCEKVLKEYEDLEVRLNPMGTVIHGDIDRAFEAIRAC QESVFKNGADRVYSVIKIDDRRDKKASLDQKIKSVEEKM >gi|325480935|gb|AEXN01000016.1| GENE 12 11224 - 12510 1416 428 aa, chain - ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 5 425 6 432 433 387 48.0 1e-107 MKTKEIINDLIEFIDNSPINYFAVKNSIELLEKNDFRKLEENEKWKLEKGGKYFVSRDDT ALIAFSVGDDPRKGFDIIGSHTDSPTFKIKSNPEMTSNGFLKFNIEGYGGMIVSSWFDRD LSLAGKLVYEDKGEFKSKLIKIDRDLLTIANCAIHINRDLNSGYKYNMQDELSPIIKTIE DDFKKDGYLQKLLAKEIGIYYKDIIDFDLALFDRQKGSIMGSDDEFIHIGRLDNLASVHQ SLTALINSKNEKFNICVLNDNEEIGSGTRAGAKSPFLDQVLERIVMNLGYDREDYFIALA NSYLISADLSHSIHPNYSNLFDSTNNTRINMGIGIKVASNGAYTTNIETRKRFLRHAKNV GAKVQTFHNRSDKVGGSTIGPIVSSKSGIKSIDVGTPILSMHSIRELGGVKDHIEAIKIF EDFYNNKY >gi|325480935|gb|AEXN01000016.1| GENE 13 12614 - 13186 606 190 aa, chain + ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 190 1 190 192 215 58.0 5e-56 MKKLQDVILTQGTVLGKDILKVDSFLNHQIKPKLIKEMGEEFAEHFKDKNINKILTVESS GIAPAVITGLVLDCDVVFARKQKSLTTDDNTYSSTCYSYTKEEMKRLIVSKDFLNEDDNV LLIDDFLANGQAAKAMVAICKQAGAKVAGVGIVIEKSYQDGRKLLDDMGLDVYSLARISH MDGKDIEFID >gi|325480935|gb|AEXN01000016.1| GENE 14 13271 - 13858 528 195 aa, chain - ## HITS:1 COG:BS_ysxC KEGG:ns NR:ns ## COG: BS_ysxC COG0218 # Protein_GI_number: 16079871 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 1 194 1 194 195 183 50.0 2e-46 MKINTVNLDQVAGFASQFPKDNFDEIAFAGRSNVGKSSFINSFLGKKNLAKTSSKPGKTK TINFYKINDRFRLVDLPGYGYAKVSKKEKEKWNNLIHEYLYKRENLKEVFLLVDIRHAPT KQDKEMYEWIVDSGFTGFVIATKYDKIPKTHLKKHIKEIMKTLNIDDEGLIFAYSSTTSH NKNVLLEQVDVIINS >gi|325480935|gb|AEXN01000016.1| GENE 15 13855 - 16185 2886 776 aa, chain - ## HITS:1 COG:BH3050 KEGG:ns NR:ns ## COG: BH3050 COG0466 # Protein_GI_number: 15615612 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Bacillus halodurans # 10 775 7 770 774 689 48.0 0 MNFIYKTDTKEYPMVPVRGLWAFPDTVVHFDCQRAVSKKAVEDALLNESEIFLVNQKDIL EDNPKKEDIYDYGTVAKIKQTFNLQNGELRVLIEAKCLGEVLDVKIEDGFFKANVKEYIF DEENFESNENIEALKKMLIEDFRSYVSIDNTIPPEIAFSLVEIDNIDKLANLITYYLPLS PKENYSILKELDIEEKLLNLHKLIQKEIELKDISKKIDAKVQENINKGQKEYYLREKLNA VKDELNDLTGKDLNEADSFRKKIKKLKINKEDKETLLKSIDRLEMIPEMSPDYGVITSYL DFVLGLPWSKKSKDNLDIIHAKKVLDEDHYGLMEVKERILESIAVRKKKGDNQAAVICLA GPPGVGKTSIAKSIARALNRKFISMRLGGVTDESEIRGHRRTYVGAMAGRIMSNLSRIKV KNPVFLLDEIDKLGSDFRGDPSSALLEVLDPEQNDKFIDRYLDIGFDLSEVFFITTANDI SNIPPALFDRLEIIQISGYTQREKEEIAKRYLIKKEMENNGLEKEDLNISDPVIEKIIKS YTREAGVRSLERNIAKICRRTVKEILEGKKKVNVSMRNYEKYLGKERFFDDQRIKEDKVG IANGLAWTQVGGTILTIEVNAMDGKGANLFTGSLGDVMKESAQAAISYLRKNSKDLKIDP DFYKNKDIHVHVPEGATPKDGPSAGITMTTAIASALTGKKVRSDLAMTGEVTITGEVLPI GGLKEKALAAYSYDIKNVIIPKENERDIEDIDKEIRDKINFIKVSNVGQVLKEALI >gi|325480935|gb|AEXN01000016.1| GENE 16 16231 - 17439 291 402 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 153 376 258 432 466 116 35 2e-25 MSKMEFEENRCSFCGKSADEVDRLIAGPDAFICNECIELCSSIIERENFGQSKNMDIELA KPREIKEYLDQYVIQQEMAKKTLSVSVYNHYKRINSNYDKDDGVELQKSNILMLGPTGSG KTLLAQTLAKKLNVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIELAQTGIIYID EIDKITRKSENPSITRDVSGEGVQQALLKLIEGTVANVPPQGGRKHPSQEYIQVDTTNIL FIVGGAFDGIKDIIKQRTNKKSIGFGSDDSENKEISLADVRTEDLLKYGLIPEFIGRVPI VVSLEDLDVDSLVKILKEPKNSLLKQYQKLFELDGVKLTFEDEAVREIAKKAFKQETGAR GLRTILEDLLLDVMYEIPSKDHIKEVIVSKGAIEDKKKLIYK >gi|325480935|gb|AEXN01000016.1| GENE 17 17443 - 18030 721 195 aa, chain - ## HITS:1 COG:NMA1525 KEGG:ns NR:ns ## COG: NMA1525 COG0740 # Protein_GI_number: 15794419 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Neisseria meningitidis Z2491 # 1 195 1 197 204 275 66.0 3e-74 MNAKNFLVPTVIEQTNRGERAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDP NKDIQFYINSPGGVVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLP NSNILIHQPSGGAQGQASDIQIQAEQILKIKKRLNKILSDNTGQTIEKIQKDTDRDFSMD AYEAKEYGLIDKVIE >gi|325480935|gb|AEXN01000016.1| GENE 18 18065 - 18451 563 128 aa, chain - ## HITS:1 COG:no KEGG:Apre_0373 NR:ns ## KEGG: Apre_0373 # Name: not_defined # Def: trigger factor # Organism: A.prevotii # Pathway: not_defined # 1 119 315 433 451 112 68.0 4e-24 MQNLDQRLRQMGISLQQYIEMTKMDMAAIRDQYRAVAEDKVKANLVMDEVALKENVEATD EEVEAEIKDAAKQYGVDDYEKFKEIFEKNVSRDTVIENIKRRKAVEILEKNVKLVPAKEE TKEEEKED >gi|325480935|gb|AEXN01000016.1| GENE 19 18547 - 19392 1310 281 aa, chain - ## HITS:1 COG:BS_tig KEGG:ns NR:ns ## COG: BS_tig COG0544 # Protein_GI_number: 16079875 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus subtilis # 5 280 6 282 424 204 46.0 1e-52 MTELKSHENNIAKFDLTVAAEDFQKAVDNVYKKNRSKYRVDGFRKGKVPKRIIEKMYGVE VFYDEAIQEVFPEPYNKAIDELNLEVIDQPSVDFDDIEKGKDVVFKVEVETKPHPTLGDY SELEVTEIPSEVTDEDVEHELKHQQEENARIIPVEDGEAKDGDTVNIDFDGFLDGERFEG GKAENYDLVLGSKSFVGDFEKQVEGHKVGDKFDVNVTFPEDYQAKEFQGKDAKFEVEINS ISRKELPEIDDEFAKDISEFETLEELKEDTKKNLKKIRKNL >gi|325480935|gb|AEXN01000016.1| GENE 20 19446 - 20771 1351 441 aa, chain - ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 6 435 16 449 451 236 36.0 9e-62 MSYEYIINRLEEEGFETYLVGGAVRDKLLGKEIHDIDLTTRARPNDIMNIFSDLKLIDIG KKFGTIKVIYKSKEYEITTFRAESSYKDKRHPDEISFSNTIEEDLKRRDFTINAMAIRKG NLIDLFGGKKDLERKIIRAVGNPYERIEEDYLRALRAVRFATVLDFSIEDNLKAAIKNMA GHIEEISKERIRDEVDKILLAKNPSRGIRLLDELNLLAYIFPEVKKMVGFDQHSSHHNLD LFDHTMKVLENCPSNLKTRMAALFHDTGKIDTFFLDENGEGRFFGHQEISEKIMRKRLKV LKYPKKFIEDTSLLVQRHMDNTNTYTKKSVRKLLRKVGEENIYDLFDLQRADVLATVHDN TENIFLAKKYLEEILNSDLPRKEDQIDFSGNDLLDLGFEEGRELGMVLKEVYGLVMDEKL VNKKSEIIKYIKNKYINLDRN >gi|325480935|gb|AEXN01000016.1| GENE 21 20771 - 21706 1205 311 aa, chain - ## HITS:1 COG:CAC3078 KEGG:ns NR:ns ## COG: CAC3078 COG4856 # Protein_GI_number: 15896329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 12 305 14 310 403 77 24.0 5e-14 MKKNNDRKLMALSILVAIIMWAFVMTSTNPSLSKTVRNVPLTIKNQELMQKEGFALVGKD EVSSVNVKVEGSRSDLASLSADDLVASVDLGTPSEGIKTLNIKVDGPSGIRVESTSPSNV NFKIEKIVKKELAVEIKVSDRLKESKIINVSNQSASKITVSGLRNNIDKVDRLILNVDKD EYLDGNIHDISIRPVDKDGKTVENVDLSQNDVSIAFDVLQSKEVGIDLSYDDKYSKNVEI LESEITPNKVVIKGEKNILDKIDKIKTKKIDLSTIREGEFDKKVELDIPDGVSLNDGDNF VNVHFKIGKKN >gi|325480935|gb|AEXN01000016.1| GENE 22 21690 - 22514 710 274 aa, chain - ## HITS:1 COG:BH0265 KEGG:ns NR:ns ## COG: BH0265 COG1624 # Protein_GI_number: 15612828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 16 266 13 265 274 253 50.0 3e-67 MSYLDNFIAYLSLIRITDIIDIALIAFIAYKLLKLLRNTRAEQVMKGFIFVLFFASIADI FNLNTVSWLMNQFFTVSLVFIIVVFQPELRSALERIGRGRSFFISDSYNKNERSIDEIVS AMSSLSRQKIGALVVIEREVGLNDIIESGTSLRSEISSELLINIFIPNTPLHDGAVIIRN DLIEAAACYLPLTTNNTLSKELGTRHRAAIGISEKSDCLVVVVSEETGTISLVSNGLINR YFDEQSLKARLVKELREDENKLNLKRRDEDEEEQ >gi|325480935|gb|AEXN01000016.1| GENE 23 22637 - 37111 14533 4824 aa, chain - ## HITS:1 COG:no KEGG:FMG_0186 NR:ns ## KEGG: FMG_0186 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 261 4818 341 4916 4919 5000 62.0 0 MKKILRKLTSFLMAFFMVVQVMLPAFMTKSKAQEENPNTIKAIDKLEEDKDSSLSVSKSH EIYDKKQSKKDEDKFSVAVSLPDTTSKFRLVKRNDLKLYEDTYYKTNEEASKEYWHIKDM LNNQGLDLDLDIIEDENGYKLSTKAENAEEDKEKSPYGENYSYIDFKIMDDFDFNEKGNQ KLFKEEKLVFNIEFLKYESPDPNFNLYEKDQEGNLTIKNEGDILALIRDKKKTLYTTNSL KEDFENIKTLKEEKEKKEAEEKAKKEAEEKAKKEEEERAKKEQAEKKAQEQKAKREAEQK EKSDQEKSDKKEASNPSSNKKEKKEEKDSSNKESKTEISFESEESSKEEKNSNKDSNKEE KTPATIEEKKEKKKEFDQVVKEMKEEAKKDPAAKDEKNGLLEGVKSFFGQTDLKKADKKL KKALADDKNGLEEIQNLLRSFGEKYKFSKADQAKLMDDNGPAIKKLIEKDADKNFRPQVF ADMGANKLNLEGKKFHILTRFDTSNATGPIQPGQFFKIHLDKALTVKPGTKLEPIKYKGD VIATPEYKSDNSIVYTITKEIKENTEIPLDIPVDYNPKNVELDDDGTFTVINKVSGLGLI DPPKDLLPQKVDVNGNPAGSIIEPGRKDVTQIIEAADSNYKMDMDAFANPVVKDGELQGY NWTVKISSDTDLSTLGYKANFTVVKGSGLGDIEDKSNLGLKDQLQGALGIHDSKHHAPGP GVREITYNLYTPVKGMQEKYMMDISVILTNKKDKQGNPKVGAKRFVVDGWPLDKVKEATP TRAGINNRTTILGKFTSESTAEWTVTDAISTGDDKGTDDENPADTKLPWETRTLGNQTLQ QNGGKIAVYGLNAKGEMVQIGTTQENVNPMPVKGKNPNTNQAVGNIAVYEYNTKTPDNKN PQTLAGVAISKYQDVNVEQNWNLGNGLKMPAMILKAVDSKDENKVLGQTTTTESGQNPDP ASRRVTIPNVKVWNIAGDGKFSKNDLKIKQEFPTGNTYNGNTINYYENNNFYDFNKKGYY IHNKATVEKLPKFANFTLIKKDEKGKPLPGASFKLLGQGEAEVVTDKEGKAQFSNIAPGT YTLFETKAPKGYKLNQEKTTVSVDDDGRITTSGSNAKLSVGTNPTVTVADPNYPDYMNAM QYATKDADGNVTTYIFLKANEARSGGSTNRDTRISLRVNGGQIEDKDDVKVYDVNPDYYR DSVRKAMTQQTVNQDLINQLGSSVLNAPNNNRVIIGTPNHPDPYTKQVGYEITFPQERFA RDWGFLVVAKSKPLNGGTNTLTYDWLTSQDTGSNAKLQNQTVNPTSTSEASKGTTITVTN EAFETRPVEVRKIDKNEKPVVGATFEIRDENDQVISTATSQPADNEGKNAGFASFGKLPE GKYTIEEIAAPEGYVKSDVIFEVTVDDSKQVTYKPKFKDGSGSPVNGEDYLITDEEQAQE EATAKINVVKQSLVINEGDSGDIGVRPQVWEAYRLESLKYNATIDLEQSSPGQRFSIQFD KNLDFTQYFGEFPKLNIGGRDVADPFFDYTTNKLTYVFNDNSIGGKTQAKIELKGIIPSK YFAQNDGTYPFTITVAPGQTGITGQQTITTNVQADYEQYDYDNKNAQVPQSYYFRDVYQD DKGDWYVAVLAYYNPVHIRTTGQKELKFNWLSTNYQGATKNFFTWEGNGNKPAFSLRDVK IYRTSPYMGTIKAGNFDKKVNYNMPLSYGVRPSQDPAKYNLVYSKAIDPRYAVNNDRQGS ITLNYDPGQIQEFGVITKNSPLKIKMPAIDDKSKDGYIIEQTFKIDDLYKFNNLWRVFCM TNNDFKSSFITRANYNKATGDQAGGEIPKFYSQKVALINKKYTPGSFKIKKLDESDRSKT LQGASFRLTDENNNVIYRTSGSDGIVEFSKLKPGIYTLEEEKAPAEHIKSDKTWRVNVGI DGFVTIIEIGLGLTGESLVGKDTIVLDVTNKPVATKFTVYKKDNENIPLQGAKFKITTTD GTEVTTGTSDKNGLVSFGKKLEKGTYLLEEESAPSGYKKLDKKWVIEIGSDNKARVYNYI EGPESGTDANVNKSILGVEGTKWVEVAKRPLTGWVLGDNRQTGYYNNWPQPYKLGTRIVG KNTKDPNSKYVIQRYVINPEADTVTLNNASIHREKPQFNNMDWYAGNEAYKIFELDKAVD GNVEDIRLENYSLTDITKDTSKVSVKSQVITGQPRLYLDFKGRQITKPIVIDVKIPYTSE DGGVGTGMDLYTNKGSYWKSDYYDMANQIVEGDPVVTKSEGGNIKGAYISEGSLDVSNDK IVQEFSFKKVDADKETDGITGATFSLKGPKKSDQDPGKEVWKKSGTDGTVKFDNLTPGIY KLTESGAPQGYEKSNTDWTVTVTKDGKIYIKDNNPGNTVPDQGATWQKVKAGTSGTVKGW SKFGEDNTPYRNRLDTRITEVNKKENKFRQVFIINKQPERLLNPYFEIHSQEENRPINLK NTQIVSLVEVDRGSTPENLINPGTKVEYDTQVYVKKNNQERIKITPKGIPDYSEKVLALT IESTLGNSGNIGTGIDFNNYNGSSEYWMTEYYNSFNDIQLEPATNTTTGKNTRTYVGTTD ATGRQTSMYANPAPKPVLYSNFGLMERSLGINKLESETTLSRTKAPMRFRSRSINTFADG LEIGDNLAGNALRAGNGWEDVDPSKSEGRRTGDLSKNGFASTRITEINKGTKRFRQEFTF YQYQYGAKNRTIEIHRQPELYDLNLSDSNIRVYQLVNGVKQEITNVKFTNKRVNGKNRFV SGNIGTNIKGTLIVEVETSYNPSFGIGLGSDYNNNTVAQYDNKAWVADSYSNEEGINKNV TQEKTYNITPNSPSNGKLEISKTSGIKQGEQVTITVTPNNGYVLDTLKVDEQNVSVNGQG QYVLTMPNHDVNVSASFKEKPQAPTKHKIYTQTPSNGTFKVDKTEAAEGEEVTITPSPAE GYKVKEIYVGSANGQVQVNNNKFTMPNSDVSIRVDFEQITQPQPSEFNINIIKKDGGTVT TDVSTAKKGGTVKINITPDQGWQIESMNVVGKNGGSVATVNQQAKTFTMPAEDVWVQVTF KQIPTKSFYVGSEPHSWGTVSVDPTESRNQYAKVGEKVTFTLNPYQGYKATGATVTKNKG GLVDVEFDPTTNKGYFIMPDISPSDAVTVRGVFKPLPAGTRYETKQIEETLKHEVETTVD ESLAPGEKVVDQKGSDGRVTYNYKITIEKGTEADAAYPADWPQNLLATFQGMKQTGERIA AYNRTEVEGSRINPTVEKVRVGKSDDPIDKFVPTDEDKLIKNGETQELVKITNKKAGITP KILKRSPGGEILPGATFTLNKMTDSTYSKIDTGFGTLTATSDEKGDVVFKNGAGNVVKLQ KGYYVVKETKAPTGYKKSTADWKIEVKDDGGRMYAEYQGPESSPSSFINDNKKSNAGYSA DNAGIKYKSRLTFIDTESKTYIQRIYIDTRAYSGTSPLNLQITPKYKREEKDAPGQHPET IKDGVKTAYFTAYKLSNPSDFSNMNDPKLDKILRTYDLSNPDLSMIKTARWRPFDWGFDE DQLNLDKGVYIVDVEGFYDDVIITGKSDKTDKYNIPQEDLGKIDLHVDFYEGARQFKQLK LDKNGNASYEAFDGASYQGGASEVTRYVKSQEGEAAAKAWSGKKDEGAKYANYVGKEVTY NGKTYKTGIINPAIGTPAVHADTSVDLNPLYNSKGHKEIPREGLEFINEEETFNITFSKH GRKDPKDDINSEKVTNNRLEGAVFKLQVRGPGGQYEDVPGTTVASAFNGYFGFRGLKPGR YRLMEVKAPEGYKPIKDPVLHFTISYEKPKTDVQTGEITKGRGVVTLEYNEGNGIFQYAP DNPKITPEEGKLVDYVTSATAKNMGKIINEVPGKGKVELTKYDDDKNLLPGAEFKLTRIS RQVKGDEDSNKNDGSYTKTVGQDGKIVFDELPIGQYELEETKAPKGYQNKGKKWRFTVGG VGLDPYINDSDVGDRDISKSIEMNSEMSVLRPDGNDGTEKEGNKKIHPHNGHALEFKNTF KIKGDKSIKAGDYFTIKLTDNIDLEGVMREKSQNLDLFADGVGTIAKAKYDKEAGTLTYV FTSYADQYNKTDFANTITAHINLMKVKNSTQNVQVGMGIEGTEFTKNNIAVDYDLNMAEI YGLNMTSKIVSFDRESGEFVQYFYINRNMNQSSDPVTFRYKPSEDVKNLRVDVINLKQNG YDNNNRQGETNKEFVNRDMPESFGVNESSDNLNWHSWYGYYQPKADENVDITLGPYNQYD SLILKVTGQVDKKDIASYDTYAKLFNKVYTYDYYGNVTNVFEQPYVERTNGVRIFENKTS ASAKLEIDAINPKNKINFKKIDQDGKILPGAEFKLVRYYKKPSDGKNWIEVQGSERTSDK EGLVKYEKLEAGKYALIETKAPKDYGKIEGHIVEFTVGEDGVITRQVVKEKPVENPQSLI ASIGAMLSSTGDANTETVTEPVSAEPIDVVNYKEIEFEKVDANDKSKKLEGATFEIHYKD KKDGKYAALTKKVTEEGKEVDKPITVTSDKYGKFKLPISKDGYYALKETKAPSGYTKATG LIREFMLENGKVKTLEKDPLKASNKTSDKGKISSEIISVDMKNKTFKQRIIINPKHEEMT IPSNQSYIRIKENDWKITPKYKEALKKQSGIGGLVNVAVLKKEGGKTLADLKENDFKKFD AISFTTAGNITGSRYGLKEMLGKEDVQDASITTTDSIVMEFNGKLDENNTSGMADQLFEL VFNSEIDDNVNDKLNVEAIAKGDPIYADHNSNNPIQVENKKTQLPMTNGLAAWIGFTIIG LVLMVLAVLYYNRKKNKAVDISSK >gi|325480935|gb|AEXN01000016.1| GENE 24 37680 - 37874 107 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRFLDSLRTINRDKQPNSTVFYLLEMNIFLVCQRPEIVPLAHFLAQHTLFGCGRLNLIFY YFKI Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:42:55 2011 Seq name: gi|325480927|gb|AEXN01000017.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00021, whole genome shotgun sequence Length of sequence - 5354 bp Number of predicted genes - 7, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 159 233 ## Apre_1822 DNA topoisomerase type IA central domain-containing protein - Prom 186 - 245 4.1 - Term 171 - 206 1.0 2 2 Op 1 . - CDS 266 - 1684 1373 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 3 2 Op 2 . - CDS 1765 - 1887 142 ## - Prom 1911 - 1970 4.0 - Term 1913 - 1957 5.1 4 3 Op 1 . - CDS 1998 - 2633 525 ## MGAS10750_Spy1695 hypothetical protein 5 3 Op 2 . - CDS 2648 - 4999 2313 ## COG5022 Myosin heavy chain 6 3 Op 3 . - CDS 4986 - 5225 189 ## SPAP_0882 hypothetical protein 7 3 Op 4 . - CDS 5240 - 5353 75 ## SPAP_0881 cell wall-associated hydrolase Predicted protein(s) >gi|325480927|gb|AEXN01000017.1| GENE 1 3 - 159 233 52 aa, chain - ## HITS:1 COG:no KEGG:Apre_1822 NR:ns ## KEGG: Apre_1822 # Name: not_defined # Def: DNA topoisomerase type IA central domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 52 1 52 573 114 100.0 2e-24 MKLVIAEKPSVAVTIAKVIGARTRKNGYYEGGGYIVSWCVGHLIQMASPDKI >gi|325480927|gb|AEXN01000017.1| GENE 2 266 - 1684 1373 472 aa, chain - ## HITS:1 COG:UU038 KEGG:ns NR:ns ## COG: UU038 COG2865 # Protein_GI_number: 13357594 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Ureaplasma urealyticum # 1 470 2 459 463 545 61.0 1e-155 MNLKGYLGETNLYDKKEKLERNKPKSWLKSVSAFANGRGGKLIFGVKEDNTILGLSDYQE VSENISEIIKIKMDPNPEFDMEIKELNGKVILILSVFAGKNTPYFVVDGGTRTAYKRIGN QSVPASRIDLFNLSLKGEHISYDSLQSKKKLEDVSFKELKIEYKERTGKDFEEKDLKSFG LVNDEENLTIAGALFADNYQVYQSRVFCTRWNGFTKANGRMDALDDIEFEGNIIYLLKAS LDFVKRNSKKMWKKGPVYRIEYPEYPERAVQEALVNALIHRDYSVIGSEVHVDIYDDRLE IYSPGGMYDGTFVQDLNPLNVSSIRRNPIIADVFARMDLMERRGSGLRKIIEAYEAEENY KENFKPEFKSTESSFITILKNLNYDTQNVTQNVTQNVTQSEGENNGQKLKPSVRRDKILE IIKSNPKITAYDLSKQFNVTDRTIKRDLKVLTDEKTIEYIGSAKDGYWKVNK >gi|325480927|gb|AEXN01000017.1| GENE 3 1765 - 1887 142 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLEDFEEDDEDYISESEDESDNEESHEESLDEDDEDDELL >gi|325480927|gb|AEXN01000017.1| GENE 4 1998 - 2633 525 211 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1695 NR:ns ## KEGG: MGAS10750_Spy1695 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 192 1 192 289 334 98.0 2e-90 MNKSIKRGVAIALLLFTFTVPATTFAMTNEGQIESQNESIYEPQKEEFEKMLKDDVFTPS KEEIPYQDVPRIPGNTSEANKPSNNPPKKTPLVKGGNTKAVNNLATQENKARGSVIENVD RNGKDITPSGDTEKDKENPVDVRQFLTFQTKSGKTMHLIVDHSSNQDNVRLLTEVGEKDL LNMIESEDKNTIKVEEPKKEEVKKKNLRLFQ >gi|325480927|gb|AEXN01000017.1| GENE 5 2648 - 4999 2313 783 aa, chain - ## HITS:1 COG:ECU04g1000 KEGG:ns NR:ns ## COG: ECU04g1000 COG5022 # Protein_GI_number: 19074177 # Func_class: Z Cytoskeleton # Function: Myosin heavy chain # Organism: Encephalitozoon_cuniculi # 281 637 998 1361 1700 70 23.0 1e-11 MKKFNTNRLRAFFMALLLVLTSTVHTSAFAKSDVTWTEDDFMYSSEGNIIAFSDKGLEKK EKTNILVFPEGTKSINGNYSLSHSNDELRYKREFGRGKHWDKVIIPDSVKHLGYAAFYEA SIDEVKLSNSLTYLGGLAFFNCGLREVTLPNTLVNIEHNAFERNNLQEITIPKSVKTIEQ YAFSRNKLHTVKVLGNPNINSKGVFHNQEVEYRPKQNPFYENHFGFNGNQGFKSIPNGLR FENGEFVFDKNVDSVELEFDYNNDLYQGKMTIYNPNKYSIDTQTDLTGQDIDEKDNKIDD LTKNIKDLENQIKDLNDKKQEDQTKIDELKEKLESCKDNGEKLKQEKAKLEEEIRDKDNK IAQLNKEIEELKNSNNDELIAEITQLKDELKRLQDENAKLKEDYSSTKWELEAEKEKTDK NENKIKEMQEKLESLEGELAKKTKEIEDKDNRIKDLEKALDEKDAKIRDLESKKKETENS KSECCKKIEELQKAIDSLKVSSENTKKELEDKIKVLEEKQKASEEEIKKLKEELDKKIEE AKKLIEEANKKAKEELEKQAKDEKDKNLNQDLSKKLDELLKLQKENKEKKEDKKSQDKKW DELLKADDKNILNQFDLNKMKKQEEQQYKKQVKDEKEFAVFQVDKNFYNIINKDGKTTVY MDVKTYVDQGRTMIPVRYIAYTLGFNVEYDNSTREAIFSNKENNILAKKTLRLNIDTGVM KDSDGKVYNSDVKPVIINGRIHASISNIAKAFGASHGDIKDGKNQTIEWDNARKAVYVFK NVK >gi|325480927|gb|AEXN01000017.1| GENE 6 4986 - 5225 189 79 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0882 NR:ns ## KEGG: SPAP_0882 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 79 1 79 79 62 100.0 5e-09 MNRKLISIRNKKKKIEEKLKDLNAKYKEICDEEIQVENEEIIVTLRRNNISLEELMEKIN DRKREEKLKEKENIHNEEI >gi|325480927|gb|AEXN01000017.1| GENE 7 5240 - 5353 75 37 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0881 NR:ns ## KEGG: SPAP_0881 # Name: not_defined # Def: cell wall-associated hydrolase # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 37 823 859 859 90 100.0 2e-17 GIYAGNGMMIHAGDPIQYTSINSKYWKSHFYGFGRPR Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:43:13 2011 Seq name: gi|325480915|gb|AEXN01000018.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00015, whole genome shotgun sequence Length of sequence - 16355 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 7, operones - 3 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 3276 3738 ## HMPREF9243_0764 KxYKxGKxW signal domain protein - Prom 3320 - 3379 3.7 2 2 Op 1 7/0.000 - CDS 4623 - 7436 3198 ## COG0178 Excinuclease ATPase subunit - Prom 7676 - 7735 12.0 3 2 Op 2 . - CDS 7872 - 9851 2478 ## COG0556 Helicase subunit of the DNA excision repair complex + Prom 9946 - 10005 8.1 4 3 Op 1 5/0.000 + CDS 10028 - 10336 300 ## COG0640 Predicted transcriptional regulators 5 3 Op 2 . + CDS 10375 - 12222 1868 ## COG2217 Cation transport ATPase 6 4 Tu 1 . - CDS 12244 - 13008 1011 ## Apre_1401 hypothetical protein + Prom 12961 - 13020 9.3 7 5 Tu 1 . + CDS 13115 - 13390 438 ## COG2388 Predicted acetyltransferase + Term 13398 - 13430 4.2 - Term 13386 - 13418 4.2 8 6 Op 1 . - CDS 13419 - 14549 904 ## COG0477 Permeases of the major facilitator superfamily 9 6 Op 2 . - CDS 14546 - 15142 826 ## Apre_0304 response regulator receiver protein - Prom 15169 - 15228 11.0 + Prom 15122 - 15181 11.7 10 7 Tu 1 . + CDS 15227 - 16156 1281 ## COG2066 Glutaminase Predicted protein(s) >gi|325480915|gb|AEXN01000018.1| GENE 1 3 - 3276 3738 1091 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_0764 NR:ns ## KEGG: HMPREF9243_0764 # Name: not_defined # Def: KxYKxGKxW signal domain protein # Organism: A.urinae # Pathway: not_defined # 108 1089 382 1385 3279 186 25.0 5e-45 MKNSKKMTEIIEKKKELGAEKTPKYGTRKLSIGLVSCMLGFSLIIAPGSSKAADGTETPG TTVSEENIPETPVVDETKPADTQAEEVKADENNVENKEKAQPAVTTEEKTAENKKAEEVK EETAEVKEEFKLTDAQIQKLKAADFTQAEINVVEENIRAYVKENKDFDVDAHIADVIKTK EANEKREAEENKKVEGENRAADKNALGVSPEEKKEAQKAGEDKVLTDDQKQRAGKSANNW KEKITQDNDYWQVEKGWQGRNLGGLSSIGMALSEINYIGTYTDANGNDVIRLQWQGDTRT NAGSWMNNLSLALKFQKDLYEKIDWDKSYAYSSYGKEEKFLFNNVKSSDYQAEFTLAQLA KSYTGALYELPINLVLKDGVKIADLGKKDYLIQHRGLDVENKLVLTNVPGTQRDVDLNTI EYGQFTRSTIVPLNSKLDNSTIPANSNRKSNKQRFGTSEYDSDKKVIRTRHYYRKTDSID SYLGNVGFTQSFDARLLDLLKEDEKGNVAYLDVNGLDNEKVYGSTPKVAIKRDQINVKNG VATIYVVGSDFKSNLEETGIKVVRATSGNIKTGIYSTLFKTATINYVNTSIEYNVDEDMI SKLFPQNKYLQAYAFSSGFVHENKDGFLRSDQEVKEDTVIKKGDKLTLEFKDRINNKGNQ YVMQIGDTYHLMNDDSAPEGASEFETISERNVGGITSSNRDMKYDITMQAGRKLSAGEKI RLWIINDNGQKYESYSWRLFLNTGNAATDKDIVNVEGENTFKKDYSPYYFQHSKSVDGVM VTKYKYVPQVEEIFDTDTEIKGTVRKDGNNVTGYYIAPTGEKFYFDTKLSADKNSAETII LDENGRKVEKGDEKYDAVYKYALGQLKDENGEGLKLKKDMPIYINTARKGQFPSDPVIEK VKSRVTFDQNYEGKPEDKVVVAPENDQYLGNAGYTANGLDYNGKNVMPENPTREGYTFVG WAKTPDATKADFTKDTPIENSLTVYAVWKKAELTDNLTPAYTDADGKVGTQTTITSPNFT GKDGKDAAKPEGTKFALGKGAPEGAKINPDTGEITYTPTEADAGKDVEIPVVVTYPDNST DEASAKISVQP >gi|325480915|gb|AEXN01000018.1| GENE 2 4623 - 7436 3198 937 aa, chain - ## HITS:1 COG:BH3594 KEGG:ns NR:ns ## COG: BH3594 COG0178 # Protein_GI_number: 15616156 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 1 937 1 938 957 1179 60.0 0 MSENKIVIKGARTNNLKNVDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESLS SYARQFLGNLDKADVDAIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLFARIGDA YCPVCGKKIEAQSIDQMVDRILKLENKTRIQILSPVVRAQKGQHKKKLQNIQKMGYVRVM IDGERYDIEEEIELSKTKKHDISIIVDRIVIKEGINSRLADSLETALELTDGLVQINVID GEDFILSSKLACPDGHVSLPEITPNMFSFNAPQGMCPECNGLGFHLQIDPDLVIPDKNLS INEGAIDPYATSGKGTYYNEMIKAIAKNHKFSLDEPIKNAPKKMIDEILYGTKKEVSFTF DSHFSGRKNYTGHFEGAIKNLSDRYERTNSDAQKKRMRGFMSEEECKTCHGHRLKDEILA IKVDGKSISEIANMSVDKTIEFFDNLKLSPMKEKIAELIIKEIKARVKFLQDVGLGYLSL SRSASTLSGGESQRIRLATQIGSGLVGVCYVLDEPSIGLHQRDNDKLIKSLRNLTDIGNT LIIVEHDEDTMKAADYLVDIGPKAGVHGGEIVAKGSLSDIKNCKKSITGAYLSGKEKIPV PKERRKWDKYIEVKNARQNNLKGIDVKFPLSTFTAVTGVSGSGKSSLVNEILYKSVTKKL NKSKTHPGKHDSIEGVDQIDKIISIDQSPIGRTPRSNPATYTKLFDNIRDVFAMTTEAKM KGFDKGRFSFNVKGGRCEACKGDGTIKVDMMFLPDVYVPCEVCHGQRYNRETLEVKYKGK NISEVLDMTVEEALKFFENHPSIVRKLQTLYDVGLGYIKIGQPSTELSGGEAQRVKLASE LAKRSTGQTLYILDEPTTGLHMADVHKLIEVLNRLVDQNNTVVVIEHNLDVIKVADHIID LGPEGGDGGGELLVTGIPEKITKCKKSYTGQFLKKIL >gi|325480915|gb|AEXN01000018.1| GENE 3 7872 - 9851 2478 659 aa, chain - ## HITS:1 COG:BS_uvrB KEGG:ns NR:ns ## COG: BS_uvrB COG0556 # Protein_GI_number: 16080570 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus subtilis # 3 655 2 660 661 842 66.0 0 MKENKFVIKSDYTPKGDQPQAIKKLADGIKEGKHHQILQGVTGSGKTFTMANIIQEVQRP TLVLAHNKTLAYQLFTEFKEFFPDNAVEYFVSYYDYYQPEAYVAATDTYIAKDSSINDEI DKLRHSATMSLFERRDVIIVASVSCIYGLGDPEEYKKLVLSLRPGQEISPDQVMKELIER QFVRNDFDFSRGTFRKRGDVLDIFPAGNDEKAIRIEFFGDEIDRISEFDSLTGKVISHIS HGYIYPASHYATTAEKAEAAIVTIKEELKERLAELESENKLVEAQRLEQRTNYDIEMLEE IGFCSGIENYSRHMSQREPGSRPATLIDYFPDDFVLFVDESHVSIPQVGGMYEGDRSRKQ NLVDYGFRLPSALDNRPLKFKEFEKLINQTVYVSATPGPYEMEKTGGEVVEQIIRPTGLL DPLIDVKPVENQIDDLIENIHQTIEKKERVLVTTLTKRMAEDLTDYLSENGIKVKYLHSD IKTIERSEIIRDLRLGKFDVLVGINLLREGLDLPEVSLIAILDADKEGFLRSETSLIQTI GRAARNSEGHVIMYADKITRSMKKAIEETERRRKIQTEFNKKHGITPTTIKKNIAEIIQV TEKAENTSEEKEEFSPEQVENILINLESEMYKAAEELDFEKAASLRDQIAKMKRDFAGI >gi|325480915|gb|AEXN01000018.1| GENE 4 10028 - 10336 300 102 aa, chain + ## HITS:1 COG:FN0260 KEGG:ns NR:ns ## COG: FN0260 COG0640 # Protein_GI_number: 19703605 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 13 102 33 122 125 83 50.0 8e-17 MEKSFENVSNNDLFDLANLFKVFSDSTRIRILFSLFDYEKNVNTISKELNLSQSAISHQL RYLKDSNLVKSQRDGQAMIYALSDRHVKFIIKLGLEHLYEDR >gi|325480915|gb|AEXN01000018.1| GENE 5 10375 - 12222 1868 615 aa, chain + ## HITS:1 COG:PAB0626 KEGG:ns NR:ns ## COG: PAB0626 COG2217 # Protein_GI_number: 14521140 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pyrococcus abyssi # 12 611 79 688 689 360 35.0 6e-99 MEIFKDMKKDRKRELFRLAYFAILIGLMTYIRKVFGNKSYVVTGFLFIYLFLGMDVFLEA IESFSKRNMMDENFLLTIASFAAFFMGNFTEACVIMLLFSLGEVFENLANDRTDKNIKSF IDIVPKKLDRENPDGSFSKVSINEINVGDIILAKDGDRIGLDGVVVDGEGLLDTSSLTGE SMPVDVRENSKVLSSSILKTGIIKYRVQKVFDQSIAYKIISLIKNSPKEKSDSEKLIRRF AKVYTPFVVAIAVFLAVVPPILFGNFASYLKMAGSFLILSCPCALVIGLPLTYVSGLGLC SKNKILVKGARYFEKLIDADYFYTDKTGTLTYGDFDVKDIIYYSEYNKNLILDYLYNLEK LSNHPIAKAIVKDLRRRDNPSYFIASESINGLGIWAKTYENEEIKIGSKDFVNIEDDSKD KAIYMTINDILVCKVLLEDRIKDDAEETIDYLRSKFSDIAVLSGDSEMAVKDLAEELSIS YAGGLLPNEKLDLVKNEQKNGHKIVFVGDGINDGPVLKYADVGISMGQGASDLAIDASDI IISDKSYSKLKDLMEIARIVDKTAKKNLVFIMLTKIIILILTLLGYGPMWLAIVGDVGVL ILSIFISTSILNKKI >gi|325480915|gb|AEXN01000018.1| GENE 6 12244 - 13008 1011 254 aa, chain - ## HITS:1 COG:no KEGG:Apre_1401 NR:ns ## KEGG: Apre_1401 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 230 1 247 254 94 35.0 5e-18 MKREFSYGSIILLEIILGIISLGLFFAFGEKASDSIIYNLITSIITWIGSFLIASGLINN RKGNVGDYFNQIHRLDKKAILVNLILIGITILITAVFGGGAAFLAIKDNPTSFMSMGIVG ALLSTLLALFTTYANHIVADPRNKDQSVGEAFKSVFSVGKKLLAKTILTYLKYFALPIIV MIGISAATIMHADSFEAIMGLTFIAMLVFAVYFLVISPIVLARIADNYLDLTGDIENNYE EIENNNDFTISRNV >gi|325480915|gb|AEXN01000018.1| GENE 7 13115 - 13390 438 91 aa, chain + ## HITS:1 COG:SA2309 KEGG:ns NR:ns ## COG: SA2309 COG2388 # Protein_GI_number: 15928100 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Staphylococcus aureus N315 # 33 90 36 93 94 58 50.0 2e-09 MEYKIDEKENQIQVFDGDRKIGFISLVNKGYLIDAPHTEVDKEYGGQGIAGKLVDKLVEY ARENNKKIIPTCPYIRNKFEKDDKYKDVYFK >gi|325480915|gb|AEXN01000018.1| GENE 8 13419 - 14549 904 376 aa, chain - ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 8 370 6 374 383 89 26.0 2e-17 MKENSIKEKLSILSISLILTSNSIISGSLVYIQQAFNLTRNQAEFIITLSSFTVMIFIFL AEYIALWLGLKKTVLLGLFLVGLSGIFPVIFKTYPAIIMSRIILGAGLGMFNGHSANYIN LLYHDNKERTKLHGLRNAAEFTGQIILFTLAGILVKINYIYTFLLYTSAFLIMIFFKINV SDVKIKRERAKINFNPNVFLFIIFAMVVLLNATSMTMRFPFVASLSRGMDVNTSFYLNFV PIVGMVSAFLFTPINLKLKNKTIFFGLSFYLLANLLIINFEKNLIGFLFCILLLTFGQSM CMPYIFAEVPRFVKGHSSRIATNLIFVGCNIGVFMAPIFMKNIDKILKTSSLSKGFIGFV IIYLIFIGIFYRRIKK >gi|325480915|gb|AEXN01000018.1| GENE 9 14546 - 15142 826 198 aa, chain - ## HITS:1 COG:no KEGG:Apre_0304 NR:ns ## KEGG: Apre_0304 # Name: not_defined # Def: response regulator receiver protein # Organism: A.prevotii # Pathway: not_defined # 1 194 1 196 196 173 54.0 3e-42 MLILEILNEDKWLDDYKFFKDFKNSSYYETLLDTYQNLNTDILYKSRIHGQGHIERVILI SLLLSFYYKLNKNDTDILRYAASLHDTKRVDDSYDTEHGYRAALYSIDYAKIDENDKNIL QAVLATHSRPDKDMDKTIEEFFVKDMDRARYLSKLFKDADALDRVRLGDLDQKYLRNDFS HDLVDFSERLFEKYMERQ >gi|325480915|gb|AEXN01000018.1| GENE 10 15227 - 16156 1281 309 aa, chain + ## HITS:1 COG:all2934 KEGG:ns NR:ns ## COG: all2934 COG2066 # Protein_GI_number: 17230426 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Nostoc sp. PCC 7120 # 17 308 23 317 334 237 43.0 2e-62 MFMKREDIEVKIEECIDKAKRYKGVGEVASYIPELKNVDEDSFALSIVTTSGDVYNFGES EKIFSVQSISKVFTLMMALKDNTIEEVFSKVGTEPTRYEFNSLIPIDQRAANPFINAGAI TTTSMIYGENKEEKFNRVMELIRQMSQNSEFTFMKDIYESEISTTDRNRAIAYYLKSKNI FDQNADEVLDLYVRICSIGANVESLAKFGAILANEGFDIYSSNLIVPQNIVQMTIAQMAS CGMYETSGEYLMKVGIPSKSGVGGGILGIVPNKCGICVYSPRLDKSGNSVVGKNLLKILS ADLGLNIFL Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:43:39 2011 Seq name: gi|325480907|gb|AEXN01000019.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00064, whole genome shotgun sequence Length of sequence - 7186 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 3, operones - 2 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 65 - 568 406 ## COG1396 Predicted transcriptional regulators + Term 609 - 643 2.1 - Term 597 - 631 2.1 2 2 Op 1 11/0.000 - CDS 639 - 2120 467 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 3 2 Op 2 . - CDS 2165 - 2734 768 ## COG0450 Peroxiredoxin - Prom 2788 - 2847 14.3 4 3 Op 1 . + CDS 3067 - 4173 1044 ## COG1929 Glycerate kinase 5 3 Op 2 . + CDS 4191 - 4856 946 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 6 3 Op 3 . + CDS 4871 - 6655 2311 ## COG1164 Oligoendopeptidase F + 5S_RRNA 7113 - 7179 94.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Predicted protein(s) >gi|325480907|gb|AEXN01000019.1| GENE 1 65 - 568 406 167 aa, chain + ## HITS:1 COG:L12334 KEGG:ns NR:ns ## COG: L12334 COG1396 # Protein_GI_number: 15671989 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Lactococcus lactis # 2 94 3 107 107 59 34.0 2e-09 MIGEKIKNKRKELNLTQEYLAKELNISRQAVSKWEKGLSEPSMDNLVKLSEIFGVDIKYF KNNDEKENDSFISKIFWDFLYAAIGLVFYLIYYFGIMEGALNKDPKQMPFLILTIFLAFS VIAFPQAIKNMGNRLEKIDYFTFSKLVLPIIFIISPFIVFYYIFKKE >gi|325480907|gb|AEXN01000019.1| GENE 2 639 - 2120 467 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 192 490 2 303 306 184 37 2e-46 MLKSNVTIGLSLNEDENSKKLKSFIEDVKSLSDKIKIREEKLDFTPAFSLNGEFEHGKIV FAGIPLGHEFESFVLALLQVGGIEPKISKEEKERIKSIKEKRNFETIVSLSCHNCPEVVQ AFNIMAVLNKNISHTMIEGSINQDICEQRDLMAVPAIFENGEFLDGGKKTMASLLDLVAE KVQKDLSNFKNYDILIVGAGPSSATSAIYGARKGLKVAIVADEFGGQVNETLDIENITGI PKTEGPKYMLSVKKQVENLGVDIIEGVRAVDFEKNDHEFNLILEDGAKINSKTIILATGT RWRLLGIDGEEKFKNKGVAFCTHCDGPLFKGKDVAVVGGGNSGIEAAIDLASIAKTVTVL EFLPELKADKILQKKLESFKNVKVITSAQTTKLLGDKKLRALKYIDRNTNEEKTIDLDGV FIQIGQIPNTEWLEGKIKLTDRGEIEVEKDGSTNIEGIFAAGDATNSLYKQIIIAAGSGA TAALSAFNYLIRK >gi|325480907|gb|AEXN01000019.1| GENE 3 2165 - 2734 768 189 aa, chain - ## HITS:1 COG:BS_ahpC KEGG:ns NR:ns ## COG: BS_ahpC COG0450 # Protein_GI_number: 16081061 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus subtilis # 1 189 1 187 187 243 62.0 2e-64 MSLIGKRLPEFNLDAYDPKTNEFVKISDKDLEGEWKVLMFYPADFTFVCPTELEDLQEKY GQLKEMGAEVYSVSVDTHFVHKAWHDESDAIGKIQYKMIGDSNKELTKALDILTEDGKAD RATFVIDPDNIIQTLEINAGGIGRKAENNIYKVKAGQYVRKHPDQVCPAKWNSEDDDTLT PGLDLVGKI >gi|325480907|gb|AEXN01000019.1| GENE 4 3067 - 4173 1044 368 aa, chain + ## HITS:1 COG:BH0555 KEGG:ns NR:ns ## COG: BH0555 COG1929 # Protein_GI_number: 15613118 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Bacillus halodurans # 3 309 4 316 380 140 31.0 3e-33 MNILLALDSIKDFENSIEIGNYFKEELEKDKNNKASILPFIDGGMGTVEIMKEVIGGDFS YLNVHNPLGEAATARYIIKKNSCIMEMAQACGLRLMYKDKLNVMESSSIGMGEMLVDGLN NGCEDFFIGIGDTAVNDMGMGMLYALGVRFFDKNLNSLNPVAKNMIKVDTIDASGLDKRI LDTHIEIATSLPLTLFQKNSFLDKRPIRKGASEEEILELEKACKHFSKKVSEFLGVSEID FPYLGAGGGVSWAMYIFFKAKISNSMELILSLVYFEKQVKDKDLLIITENVNEFNGENSI NLARFAKRYKEDIKIIFLQDEDYPKLKDNSYIDETYNFKLNPILERSDYEKEIRSMARDF IDKNFAKK >gi|325480907|gb|AEXN01000019.1| GENE 5 4191 - 4856 946 221 aa, chain + ## HITS:1 COG:SP2094 KEGG:ns NR:ns ## COG: SP2094 COG0705 # Protein_GI_number: 15901909 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Streptococcus pneumoniae TIGR4 # 6 213 11 222 225 123 38.0 3e-28 MAKGKMTRILMAINVIVFIFMTVTGGSENIENLLRFNAMSKIHVYQGEWWRLFCPIFIHI GVFHLLMNMYFLNSVGDTFESLYGSKNFLIIYLLTGVMGNLFTYAFGEITSVSAGASTSL YGLFGLALGIMFNYRDNEFLRQFGSSFIGIVAINIIYSFMVPGIGITGHIGGLLGGFILA GFFPIMNMTLPTSTKIIAIIAFGLIAMGFIYIGNRSVAQVL >gi|325480907|gb|AEXN01000019.1| GENE 6 4871 - 6655 2311 594 aa, chain + ## HITS:1 COG:BH2856 KEGG:ns NR:ns ## COG: BH2856 COG1164 # Protein_GI_number: 15615419 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 3 592 8 598 598 517 43.0 1e-146 MDRKDIDKSLKWDTEKIYKTDDDFYKDVEEVKNLIEKTKTYKGRILESADSLYDFLKTDE KLERKFSKLGVYASLKSDEDTRVAKYQEMTKIADNLFASLAQELSFITPEILSEDYKKVQ TYIEEKDELKIYEHYFEDLFRNKDHTLGENEEKIIASFSKLSQNPQNTYMIFSNADLKFP KVKKGDEEIQITDANFTNLELDSNREFRKEVYEKYYTVYKQFENTAASLLDGEMTANNTI AKLKKFDSARKMSLFANNIDEKVYDNLIEVIHDNIEIHRDYTSLRKKVLGLDDLGFEDIY LPLVEDYNKTYTFDEAKELILKALAPLGEDYIKKAREGFDDRWFDVMENDGKRSGGYSSG SYDTEPYILLNYNNSLDSLFTTAHELGHSMHSYYTRKTQPYIYGDYSIFLAEIASTTNEL ILLNYMIDNAKDEKEKAYLLNHYVNSFKSTVFRQTMFAEFELEANKLVENSMPVTAEKLN KIYHDLNVDYFGEDIEVDKYISTEWARIPHFYMFYYVFQYATGFSSAVSLSEKILKGNKE DLEKYLNFLKAGKSKYPLQVLKEAGVDMSKKDSLQKAMDVCKEKLEELKKSLEK Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:43:40 2011 Seq name: gi|325480906|gb|AEXN01000020.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00027, whole genome shotgun sequence Length of sequence - 912 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 66 - 140 78.3 # Asn GTT 0 0 + TRNA 203 - 279 82.1 # Met CAT 0 0 + TRNA 283 - 359 82.6 # Met CAT 0 0 + TRNA 404 - 478 77.2 # Glu CTC 0 0 + TRNA 492 - 566 73.1 # Glu TTC 0 0 + TRNA 733 - 808 92.3 # Val TAC 0 0 + TRNA 836 - 912 84.3 # Asp GTC 0 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:43:42 2011 Seq name: gi|325480902|gb|AEXN01000021.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00011, whole genome shotgun sequence Length of sequence - 4551 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 895 552 ## SPN23F_12500 hypothetical protein - Term 938 - 968 1.2 2 2 Tu 1 . - CDS 1006 - 2805 2432 ## COG1164 Oligoendopeptidase F - Prom 2825 - 2884 8.2 + Prom 2682 - 2741 5.8 3 3 Tu 1 . + CDS 2875 - 4113 1467 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) + Term 4340 - 4370 -0.5 Predicted protein(s) >gi|325480902|gb|AEXN01000021.1| GENE 1 1 - 895 552 298 aa, chain - ## HITS:1 COG:no KEGG:SPN23F_12500 NR:ns ## KEGG: SPN23F_12500 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_ATCC700669 # Pathway: not_defined # 16 276 29 295 372 72 25.0 2e-11 MGNKDINDILNDSLTNFSETKLDKRNPYKKINLEEVFDEFFESLEKNDSNFSWVDKLNRI DKNKNAEDKDKVANIHYGLPSHVHGNYKDGSIYLCLFNPNVIGITDNNLIYKSESSKKES AKICSLEDYYTKPPLLEDKKDPIDDEFWRIINSYKEWKNDDKKRKINIEKLKNLIISDES TLTKELKNPELGTYYIDNYFDKLINKCANKLKDTDKIVNMELCPFRSKNASTISNDILKS EISLFACYIIWYRIGKYINNKNTNKPIFIFRSYSKWEDILEDSLYKLNNKKITKIIIR >gi|325480902|gb|AEXN01000021.1| GENE 2 1006 - 2805 2432 599 aa, chain - ## HITS:1 COG:SA1216 KEGG:ns NR:ns ## COG: SA1216 COG1164 # Protein_GI_number: 15926964 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Staphylococcus aureus N315 # 4 595 8 599 604 504 41.0 1e-142 MVKRNEVDIKETWRLEDLFESDEKFYEELDKTIKASENFKKTYSQIDTSDKLYKALKDLS EIYGAMHRLGSFAGISTEVDANDPHPQKRYANFGSKASEAYANLTFFDGLLTKIDEKIIN EVRKNHKDYDYFLKRALEKKDHILDDAAEEVISKLAPTFDAPYGEYASLRYGDIKVEDIK IDGKEIPLNHNTFEEYYETDKDTKIRREAFKNYHKALARYESGNGAIYNTHINNEKILAN LRGYDSVIDMLLSYQDIPREIYDNHINTIMEKLPKHMRKYANILKKVYKLDQMTYADLKL SIDSGFSKEIEIDQARDYIVDGLKVLGDDYVEMLKKAFSDRWIDCAQNEGKRTGAFCDTP YGCHSYIMTTYNKDMSQVMTLAHELGHAGHFENTNKNQDALNTDVSMYFVESPSTANEIT MERYLLKNAKDDREKLWVLDTMISKTYYHNFVTHFLEAAFQREVYERIDKGESLTAGDFK EIFNKKLKEFWGDAVKLVEGSDLTWMRQPHYYMGLYPYTYSAGLTIGTKVSEKIINGDEK DIKNWREVLTLGSTLSPMDLAKKAGVDMTNTKALEETIEFIGQIIDQIDELCEKLGLYE >gi|325480902|gb|AEXN01000021.1| GENE 3 2875 - 4113 1467 412 aa, chain + ## HITS:1 COG:BS_ampS KEGG:ns NR:ns ## COG: BS_ampS COG2309 # Protein_GI_number: 16078509 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Bacillus subtilis # 7 412 7 409 410 375 48.0 1e-104 MTVNKNKLENYAKLAVEFGVNVQKNEDVLINSSLDDPALARLIAKYSYEKGARLVSINWK DEELTKLKYTYEDQETLNEVPDYIIEKNIYQLEKHRSNRISIIGDDPDLLKDLDQKKIAE AVRENSLKLKDFVKYTMNDMVSWLVIAYPTKKWAKKIFPDLDEEKAVDKLWQVIFDVSRV DEDWEKTKKNWNDHINLLNEKAEFLNSHQFDEVHYKSKNGTDLRVKLPKNHIWMSASSKN EKGDLFLPNIPTEEVFTSPQFDGVDGRLVAVKPLVYNGVIINNFEFTFENGKVVDFKAEE GYDTLKEMLESDENAKYLGEIALVPYESPISKSNILFFNTLFDENASCHFALGKAYPTTV KGGTEVEDKDLHKIGLNDSLIHEDFMVGAKDLSIKAYKDGEEFDVFVDGNWA Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:43:49 2011 Seq name: gi|325480893|gb|AEXN01000022.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00035, whole genome shotgun sequence Length of sequence - 6799 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 3, operones - 1 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 163 190 ## Apre_1339 phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20) 2 1 Op 2 4/0.000 - CDS 172 - 1194 1218 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 1285 - 1344 5.5 - Term 1214 - 1244 0.3 3 1 Op 3 4/0.000 - CDS 1414 - 2145 680 ## COG0566 rRNA methylases 4 1 Op 4 . - CDS 2145 - 2498 538 ## PROTEIN SUPPORTED gi|228004105|ref|ZP_04051086.1| LSU ribosomal protein L20P 5 1 Op 5 . - CDS 2511 - 2711 219 ## PROTEIN SUPPORTED gi|228004106|ref|ZP_04051087.1| LSU ribosomal protein L35P 6 1 Op 6 . - CDS 2722 - 3261 377 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 - Prom 3284 - 3343 7.1 7 2 Tu 1 . - CDS 3422 - 4798 1774 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 4994 - 5053 11.0 + Prom 4820 - 4879 13.0 8 3 Tu 1 . + CDS 5039 - 6781 1903 ## Apre_0318 hypothetical protein Predicted protein(s) >gi|325480893|gb|AEXN01000022.1| GENE 1 1 - 163 190 54 aa, chain - ## HITS:1 COG:no KEGG:Apre_1339 NR:ns ## KEGG: Apre_1339 # Name: not_defined # Def: phenylalanyl-tRNA synthetase, beta subunit (EC:6.1.1.20) # Organism: A.prevotii # Pathway: Aminoacyl-tRNA biosynthesis [PATH:apr00970] # 1 53 1 53 795 77 71.0 2e-13 MLVPLIWQNDYIKLDEDLKTITDRLSETGSHVESVNFISDKLEGLVVGKVLKQE >gi|325480893|gb|AEXN01000022.1| GENE 2 172 - 1194 1218 340 aa, chain - ## HITS:1 COG:CAC2357 KEGG:ns NR:ns ## COG: CAC2357 COG0016 # Protein_GI_number: 15895624 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Clostridium acetobutylicum # 1 340 1 339 339 361 50.0 1e-99 MKEQLEALVKKASEAIEKSEDLKTLDDLRVKYLGKKGEITSLKKNISKLPNDQKPMAGKL INQTSKEVENKLEDRKEEIKKILLEKKVKEEKIDVTANFDLYSSGHLSVINQTMAELEEI FQNMGFDVVEGPEIDTVKNVFDDLNSPKNHPSRSLSDTFYINENTLLRPHTSSMQIRVMN EGKLPIKMVSAGRVFRNDEVDATHSPMFHQLECLVVDENVSLANLKATLETFIKEMFGDE MKMRYRPHHFPFTEPSLEVDVTCPICGGKGCPACSNTGWSMELLGGGMVHPNVLENCGID SEKYTGFAFGLGVDRIAMVKYGLDDIRLLFDNDKRFIEQF >gi|325480893|gb|AEXN01000022.1| GENE 3 1414 - 2145 680 243 aa, chain - ## HITS:1 COG:CAC2358 KEGG:ns NR:ns ## COG: CAC2358 COG0566 # Protein_GI_number: 15895625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Clostridium acetobutylicum # 2 236 4 253 261 137 37.0 1e-32 MIIKSESNEKYKYINKLKKKKYRKKFKSFIVESIKIVDQIPEDFECEFVFVNEDMKDYKT DFKKIVFSNNLFDKLSLLENPEGVSAVIKMKDKKEISSKKVLLLDHMQDPGNLGTIIRSA EAFSFKDIIFLNNCVDLYNEKTIRASMGSIFRLNFIDLELEDVKDLINKDYKLILADMDG KSVDYFKSCDKIILAIGNEANGISKSLKDLSDDFVSIKMDGEIESLNAAIAASILMNNFS QSG >gi|325480893|gb|AEXN01000022.1| GENE 4 2145 - 2498 538 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228004105|ref|ZP_04051086.1| LSU ribosomal protein L20P [Anaerococcus prevotii DSM 20548] # 1 117 1 117 117 211 90 9e-55 MARVKRALNAKKRHKKVLKQAKGYYGSKSLLFKTANQAVMKSLQYAYIGRKRRKRDFRKL WIARINAAARANGTSYSKLMGNLKKANIDINRKMLAEIAVSNPEEFTKLVEIANQAA >gi|325480893|gb|AEXN01000022.1| GENE 5 2511 - 2711 219 66 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228004106|ref|ZP_04051087.1| LSU ribosomal protein L35P [Anaerococcus prevotii DSM 20548] # 1 64 1 63 65 89 67 9e-18 MAKNKIKTKRAAAKRFKVTGSGKIKRHKAYKGHLTAKKTPARKRRLRKSTIAAKGDAKNI KRLLNI >gi|325480893|gb|AEXN01000022.1| GENE 6 2722 - 3261 377 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 22 174 3 156 159 149 46 4e-36 MRIFGGKIIKDLRINDEIRDNKLRLIDEDGSQVGVVSKNEALDRAYDKHLDLVLMSPNAK PPVARIMDYGKFKYEQEKKAKENKKKQKTTQTKETRFSLNIEDHDLETKANQTKKFLNNG DKVKVSVRFKGRELGHKNLGYDLLDKFMEFVGDCAQVDKKPAMEGRSLVLFISPNTEEN >gi|325480893|gb|AEXN01000022.1| GENE 7 3422 - 4798 1774 458 aa, chain - ## HITS:1 COG:CAC3595 KEGG:ns NR:ns ## COG: CAC3595 COG2509 # Protein_GI_number: 15896829 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 4 457 3 455 457 608 65.0 1e-174 MREYDVVVVGSGASGSFMAYEFTKLNSDKKVCVIDEGRKVKARRCPISEGKVDSCIGCKP CNIMYGFGGAGTLSDGKYNITTNFGGDLHNYIGEKKALELMEYVDSVLMDFDKGDATLYS TENTDLKRECLRNDLHLLTAKVRHFGTERNREILQKIYDYVKDTIDFEFMTKVLSVDFED GYYFVKTDKDETIKCKYLVLAAGRSGSKWISETCQEFDVEMKKNRVDIGVRVEVPAEVFK HITDKVYEAKIVYQTKQYNDLVRTFCMNPYGEVVTENTNGIITVNGHSYANPELQTENTN FALLVTNRFTEPFKDSNEYGESIAKVSNMLGGGVLMQRFGDLVKGRRSSERRMKKSFLRP TLNATAGDLSLVMPKRQLDDIIEMIYALDKIAPGMANDDTLLYGIEVKFYNSVVEVNEEF ETSQNNLFVLGDGSGVTHSLSQASASGVEMARIINDRK >gi|325480893|gb|AEXN01000022.1| GENE 8 5039 - 6781 1903 580 aa, chain + ## HITS:1 COG:no KEGG:Apre_0318 NR:ns ## KEGG: Apre_0318 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 580 1 579 579 725 62.0 0 MSKDFSITGNKAILNLSEQFFNDVNELLNSQSFLDLTKSFINYHKKESTRVYAYIEQFFI NSSVDSLAKELTDILKLLTVMNIDEISSKINKYHNLNKEKYGLLKIVEEFYNYWRNLERY SIIEQKEDARGVGVVNFVEINEKLKNMILQAYRRIEMSILGQWPKVYRQVPAAADASIMI RNFDKKYPKAYEFLNYVCFITQVMIETPYITYTKSNKRDGVFEEVYENPILKTKINAKHF FCYPAKVGDNLIYIYFHRDLLTHGVSASNLFELADVEDIENKKPDAIYVYGPKDKENKKN SFYYDEENKLYVGYIAYCDEIDYFGYLKKMVLTLNNVINIKKGYLPIHGAGLSVVLQNNK TVNIVILGDSGAGKSESIEAFRSLAKDYIKEMTIVFDDMGSFRIKNGKVYAYGTEIGAFV RLDDLDAGYAFKQIDRSIFMNPDKINSRLIMPVATFDEINLGYPVDFFLYADNYSAVLDN CNSIELFDNKKEALRVFKRGARLAKGTTTEKGLVQTYFANPFGPVQKREECDKLLDKYFD NLFENNIKVGIIKTQLGLDHMQFEGPKSAAIELFELIKKM Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:44:32 2011 Seq name: gi|325480808|gb|AEXN01000023.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00039, whole genome shotgun sequence Length of sequence - 88077 bp Number of predicted genes - 89, with homology - 84 Number of transcription units - 33, operones - 23 average op.length - 3.4 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 191 326 ## MGAS10750_Spy1685 hypothetical protein - Prom 215 - 274 6.0 - Term 328 - 365 3.1 2 2 Op 1 . - CDS 394 - 702 379 ## Arnit_2051 hypothetical protein 3 2 Op 2 . - CDS 731 - 919 65 ## CD0412 putative conjugal transfer protein - Prom 1060 - 1119 5.9 - Term 929 - 982 -0.9 4 3 Op 1 . - CDS 1192 - 2838 1521 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 5 3 Op 2 . - CDS 2835 - 5168 2380 ## COG1199 Rad3-related DNA helicases - Prom 5193 - 5252 12.4 - Term 5208 - 5253 4.0 6 4 Op 1 8/0.000 - CDS 5254 - 6054 1003 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 7 4 Op 2 . - CDS 6062 - 6649 967 ## COG1704 Uncharacterized conserved protein 8 4 Op 3 12/0.000 - CDS 6676 - 7176 534 ## COG0602 Organic radical activating enzymes - Term 7180 - 7213 2.4 9 4 Op 4 . - CDS 7218 - 9338 2425 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 9516 - 9575 8.5 - Term 9529 - 9569 5.2 10 5 Op 1 . - CDS 9586 - 12165 1781 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 11 5 Op 2 . - CDS 12175 - 13128 1130 ## COG2214 DnaJ-class molecular chaperone - Prom 13239 - 13298 8.3 12 6 Tu 1 . - CDS 13685 - 13807 105 ## - Prom 13833 - 13892 9.0 13 7 Op 1 . - CDS 13927 - 14361 498 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Term 14367 - 14403 4.4 14 7 Op 2 . - CDS 14408 - 14926 735 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 15 7 Op 3 . - CDS 14937 - 15842 1108 ## COG1316 Transcriptional regulator 16 7 Op 4 . - CDS 15852 - 16325 484 ## COG2426 Predicted membrane protein - Prom 16350 - 16409 9.8 - Term 16376 - 16415 8.1 17 8 Tu 1 . - CDS 16423 - 19059 2655 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily - Prom 19230 - 19289 15.7 + Prom 18971 - 19030 12.6 18 9 Op 1 . + CDS 19156 - 19668 537 ## COG1982 Arginine/lysine/ornithine decarboxylases 19 9 Op 2 . + CDS 19698 - 20495 611 ## COG1982 Arginine/lysine/ornithine decarboxylases 20 9 Op 3 . + CDS 20549 - 20698 233 ## 21 9 Op 4 . + CDS 20764 - 22149 1686 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) + Term 22154 - 22189 4.0 - Term 22145 - 22173 -0.1 22 10 Op 1 . - CDS 22174 - 22785 393 ## COG1040 Predicted amidophosphoribosyltransferases 23 10 Op 2 . - CDS 22803 - 23234 404 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member - Prom 23262 - 23321 7.4 24 11 Op 1 . - CDS 23323 - 24957 1595 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 25 11 Op 2 . - CDS 24957 - 26237 1737 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 26 11 Op 3 . - CDS 26247 - 26876 939 ## COG0035 Uracil phosphoribosyltransferase 27 11 Op 4 . - CDS 26887 - 27924 1031 ## COG0009 Putative translation factor (SUA5) 28 11 Op 5 . - CDS 27896 - 28900 1042 ## COG0053 Predicted Co/Zn/Cd cation transporters 29 11 Op 6 32/0.000 - CDS 28901 - 29974 1458 ## COG0216 Protein chain release factor A 30 11 Op 7 . - CDS 29984 - 30775 756 ## COG2890 Methylase of polypeptide chain release factors 31 11 Op 8 . - CDS 30811 - 31017 325 ## PROTEIN SUPPORTED gi|227499756|ref|ZP_03929856.1| ribosomal protein L31 32 11 Op 9 . - CDS 31082 - 31672 403 ## COG0398 Uncharacterized conserved protein 33 11 Op 10 . - CDS 31724 - 33073 1711 ## COG1158 Transcription termination factor - Term 33084 - 33117 5.4 34 12 Op 1 . - CDS 33126 - 33992 1314 ## COG0191 Fructose/tagatose bisphosphate aldolase 35 12 Op 2 . - CDS 34002 - 34094 58 ## 36 12 Op 3 . - CDS 34067 - 34300 207 ## gi|325847802|ref|ZP_08170024.1| hypothetical protein HMPREF9246_1752 37 12 Op 4 . - CDS 34291 - 36009 2123 ## COG0442 Prolyl-tRNA synthetase 38 12 Op 5 . - CDS 36075 - 36566 733 ## COG2190 Phosphotransferase system IIA components 39 12 Op 6 . - CDS 36570 - 38273 178 ## PROTEIN SUPPORTED gi|210464454|ref|ZP_03287148.1| 30S ribosomal protein S1 40 12 Op 7 . - CDS 38297 - 38656 246 ## PROTEIN SUPPORTED gi|87310993|ref|ZP_01093118.1| ribosomal protein S1-like RNA-binding domain protein - Prom 38738 - 38797 7.7 - Term 38763 - 38801 5.5 41 12 Op 8 . - CDS 38807 - 39991 965 ## Apre_0746 hypothetical protein - Prom 40107 - 40166 79.9 + TRNA 40088 - 40163 76.4 # Thr CGT 0 0 - Term 40467 - 40497 1.1 42 13 Tu 1 . - CDS 40508 - 41962 1759 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 41987 - 42046 12.3 - Term 42056 - 42082 -0.6 43 14 Op 1 . - CDS 42083 - 43381 422 ## PROTEIN SUPPORTED gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase 44 14 Op 2 31/0.000 - CDS 43381 - 44496 1454 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain - Prom 44579 - 44638 14.0 - Term 44628 - 44672 10.2 45 15 Op 1 29/0.000 - CDS 44688 - 46508 2708 ## COG0443 Molecular chaperone 46 15 Op 2 21/0.000 - CDS 46520 - 47056 752 ## COG0576 Molecular chaperone GrpE (heat shock protein) 47 15 Op 3 5/0.000 - CDS 47074 - 48072 1256 ## COG1420 Transcriptional regulator of heat shock gene 48 15 Op 4 . - CDS 48147 - 49271 1125 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Prom 49300 - 49359 7.0 + Prom 49088 - 49147 9.0 49 16 Tu 1 . + CDS 49342 - 49518 221 ## 50 17 Op 1 14/0.000 - CDS 49524 - 51329 2263 ## COG0481 Membrane GTPase LepA 51 17 Op 2 . - CDS 51329 - 51877 852 ## COG0681 Signal peptidase I - Prom 51930 - 51989 8.8 + Prom 51934 - 51993 8.4 52 18 Tu 1 . + CDS 52019 - 52285 288 ## PROTEIN SUPPORTED gi|228004015|ref|ZP_04050999.1| SSU ribosomal protein S20P - Term 52295 - 52332 4.0 53 19 Op 1 . - CDS 52353 - 53366 1165 ## Apre_1185 DNA polymerase III, delta subunit 54 19 Op 2 . - CDS 53363 - 55543 1082 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) - Prom 55569 - 55628 6.8 + Prom 55513 - 55572 8.7 55 20 Tu 1 . + CDS 55598 - 56344 570 ## Apre_1187 hypothetical protein + Term 56533 - 56565 -0.2 - Term 56335 - 56368 4.5 56 21 Op 1 . - CDS 56375 - 58783 3031 ## COG0495 Leucyl-tRNA synthetase 57 21 Op 2 . - CDS 58793 - 60181 1666 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 58 21 Op 3 . - CDS 60162 - 61493 1183 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase - Prom 61554 - 61613 7.2 59 22 Op 1 . - CDS 61631 - 62083 357 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 60 22 Op 2 . - CDS 62085 - 63188 1723 ## COG0206 Cell division GTPase 61 22 Op 3 . - CDS 63204 - 63983 772 ## Apre_1202 polypeptide-transport-associated domain-containing protein FtsQ-type 62 22 Op 4 4/0.000 - CDS 63985 - 65070 960 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 63 22 Op 5 28/0.000 - CDS 65071 - 66381 1302 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 64 22 Op 6 . - CDS 66378 - 67328 929 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 65 22 Op 7 . - CDS 67334 - 67732 363 ## Apre_1206 hypothetical protein 66 22 Op 8 29/0.000 - CDS 67734 - 68654 1062 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 67 22 Op 9 . - CDS 68656 - 69069 327 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 69141 - 69200 13.7 68 23 Op 1 . - CDS 69258 - 70019 771 ## COG0682 Prolipoprotein diacylglyceryltransferase 69 23 Op 2 1/0.000 - CDS 70021 - 70758 1075 ## COG0217 Uncharacterized conserved protein 70 23 Op 3 . - CDS 70770 - 71417 659 ## COG1739 Uncharacterized conserved protein 71 23 Op 4 . - CDS 71380 - 72627 1289 ## COG2262 GTPases - Prom 72674 - 72733 13.7 + Prom 72633 - 72692 10.3 72 24 Op 1 . + CDS 72803 - 74953 2572 ## COG5009 Membrane carboxypeptidase/penicillin-binding protein + Prom 75011 - 75070 2.5 73 24 Op 2 . + CDS 75124 - 75732 723 ## Apre_1213 glycosyl transferase family 51 + Term 75738 - 75764 -1.0 - Term 75725 - 75751 -1.0 74 25 Tu 1 . - CDS 75757 - 76263 381 ## COG0563 Adenylate kinase and related kinases 75 26 Op 1 . - CDS 76314 - 77180 896 ## COG0207 Thymidylate synthase - Term 77207 - 77236 2.1 76 26 Op 2 . - CDS 77249 - 77497 453 ## gi|212697067|ref|ZP_03305195.1| hypothetical protein ANHYDRO_01632 - Prom 77545 - 77604 8.5 + Prom 77487 - 77546 11.6 77 27 Op 1 40/0.000 + CDS 77656 - 78369 737 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 78 27 Op 2 . + CDS 78350 - 79666 1400 ## COG0642 Signal transduction histidine kinase 79 27 Op 3 . + CDS 79712 - 81109 1257 ## Apre_1217 peptidase S41 + Term 81115 - 81147 -0.9 - Term 81104 - 81136 -0.9 80 28 Tu 1 . - CDS 81146 - 82219 1421 ## Apre_1218 hypothetical protein - Prom 82244 - 82303 8.6 81 29 Op 1 . - CDS 82356 - 82772 509 ## Apre_1219 hypothetical protein 82 29 Op 2 . - CDS 82762 - 83289 601 ## Apre_1219 hypothetical protein - Prom 83317 - 83376 8.8 + Prom 83281 - 83340 10.0 83 30 Op 1 . + CDS 83449 - 83616 267 ## gi|212697060|ref|ZP_03305188.1| hypothetical protein ANHYDRO_01625 + Prom 83625 - 83684 5.7 84 30 Op 2 . + CDS 83790 - 84038 469 ## COG0655 Multimeric flavodoxin WrbA + Term 84044 - 84086 6.4 85 31 Op 1 . - CDS 84064 - 84201 205 ## 86 31 Op 2 . - CDS 84276 - 84767 746 ## COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 - Prom 84876 - 84935 10.8 + Prom 84856 - 84915 11.2 87 32 Tu 1 . + CDS 84939 - 85211 434 ## Apre_0024 hypothetical protein + Term 85217 - 85241 -1.0 - Term 85205 - 85229 -1.0 88 33 Op 1 . - CDS 85235 - 86866 1101 ## Apre_0167 hypothetical protein 89 33 Op 2 . - CDS 86859 - 87614 193 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 - Prom 87676 - 87735 8.1 Predicted protein(s) >gi|325480808|gb|AEXN01000023.1| GENE 1 2 - 191 326 63 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1685 NR:ns ## KEGG: MGAS10750_Spy1685 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 63 1 63 103 93 93.0 2e-18 MDRKMININANLVKESEFSEFEKDGESVQVANFALVKKYGKGKEYTNCSVYGEKVEIVKE FGK >gi|325480808|gb|AEXN01000023.1| GENE 2 394 - 702 379 102 aa, chain - ## HITS:1 COG:no KEGG:Arnit_2051 NR:ns ## KEGG: Arnit_2051 # Name: not_defined # Def: hypothetical protein # Organism: A.nitrofigilis # Pathway: not_defined # 1 102 3 104 106 85 64.0 9e-16 MVDYLFNSSGEWICFKVNKFIWDKNGKLIGWLPWGDNEVVTMKGDYLGTIVDKDRIYYFT NHPYRGYPGYPGYPGYPGYPGYPGFAGYKPLPSGAKDIVIKK >gi|325480808|gb|AEXN01000023.1| GENE 3 731 - 919 65 62 aa, chain - ## HITS:1 COG:no KEGG:CD0412 NR:ns ## KEGG: CD0412 # Name: not_defined # Def: putative conjugal transfer protein # Organism: C.difficile # Pathway: not_defined # 7 59 541 593 594 77 67.0 1e-13 MLELACGVRPFLSDKFDVTKYKNYKLLEDYDNENLFDVEEYLKQKGRAKLTPNTRIFRVL YI >gi|325480808|gb|AEXN01000023.1| GENE 4 1192 - 2838 1521 548 aa, chain - ## HITS:1 COG:CAC1435 KEGG:ns NR:ns ## COG: CAC1435 COG2265 # Protein_GI_number: 15894714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 1 454 4 453 456 366 46.0 1e-101 MRQKAIKDVEIIDMSYPNISIGKINEEKTVQFKGGVLGQKVRVKITKNRGNNKKGKFMEV LEESKIENAKEFCPNAGICGGCSYQKMGYETELLLKHNMMQKLLKNHHIDVKELSIVRSP KIKGYRNKMEYTFGDSYKDGPLVLGLHRQNRFYEIVDTEGCNIVDEDFESIRKHVQNYFR EKNTSFYHKKAHTGLLRNLIIRKAMHTGEIMVILVTSSDKSFDPMRRDLFAHNLLNARTN GRIVSIYHVINDSLSDAVKVDSMELLFGKKYIEENMNDLKFQISPFSFFQPNVFTAEKIY QKAIELANVDKNKNVLDLYSGTGTITQLFAKAANKAVGIEIVEEAVEKAFDNAKENQIEN INFIAGDVLEKIDLVKGKYDIVVLDPPREGINPKAIKKIMDINPKEFVYISCNPKTQVRD IEIFMENGYKVEKYQAFDQFPRSRHVETVALLSKLDVDKHIDVEIELDELDLTSAESKAT YAQIKEYVWNKFELKVSTLYIAQIKRKCGIELREHYNKSKKEKQIIPQCTPEKEEAIMDA LRHFKMIE >gi|325480808|gb|AEXN01000023.1| GENE 5 2835 - 5168 2380 777 aa, chain - ## HITS:1 COG:lin0195 KEGG:ns NR:ns ## COG: lin0195 COG1199 # Protein_GI_number: 16799272 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Listeria innocua # 3 772 4 776 779 598 39.0 1e-170 MYIKTSVRKLIEFVMRSGDIDNSFRDNNRMVQGIKAHQKIQKSYDKNYKAEYYLTNITKI DDMEFHVEGRADGLLKKKGQIIIDEIKSTTRNLEKLDDSNKLHWAQAFCYGYFYGVKKDL KKLTIRLTYVSLDDYRTKTFEKEKSLNELYDFYINLLKEYINFSKILSINLEKRNKSAKE LSFPYRGYRKGQRKMSVAVYRAILDKKKLFVDAPTGTGKTISTIFPAVKSLGEGLSDKIF YLTAKNTTAKEALKSLYLLKEKNLSLKAVSLTSKEKICLNDEISCNPDDCPFARGHFDRV NDGLKDILENEDIMDFDIITSYAEKHRLCPLEFELDLALYSDLIICDYNYVFDPNVYLRR FFDESIDEYIFLIDEAHNLLERSRKMFSHEFVDTSFKKLREGMDIKKDLKIIKSIDSILD EFEKMYKNYGKKLFYYTTDNNDDFDKKLMGLSKKLEKVLIKDKKRDDYDKIEDMFFEINH HLKISDNFREGFYQTLTYDENSMEKIYEIKCIDPSQVLSEKYKLARSSVFFSATLSPMNF YIKMLGAEDSLKVHLDLPFDKKNFALLASPISTRYKDRNNNLMDIADLIHEFINAKKGNY FIFFPSFSYLTDVYEYYKENYNDDILVQERSMSPIERHKFLQNFTYESKKTAFLVLGGIF SEGVDLKGDRLIGSMVISVGMPGVSDERNLIKTHFDQISHNGFDYSYTYPGLNKIFQAAG RLIRGEKDKGIIYLIDDRFLWDKYRRLYPRHWSNLIEVKDKKELKNLIEKFWNEENK >gi|325480808|gb|AEXN01000023.1| GENE 6 5254 - 6054 1003 266 aa, chain - ## HITS:1 COG:TM0962 KEGG:ns NR:ns ## COG: TM0962 COG1512 # Protein_GI_number: 15643722 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Thermotoga maritima # 15 178 5 168 238 108 39.0 9e-24 MRKRKNIIVTILFAFILLFLPNKSLAENLPEAPKTYYYDELNLIDQETKDHLTKVNKELE QKTGSQVIYVSLKDIEDQPMQVGTDLLNKWKIGDKEKNNGVLILISQRKGQDKKDISIIT GYGIEGRLNDGKVGRIIDEFMLDYMREGDFSKGIREGFNAIVSEIAKEYQVELNGDYDKY SERLKEDQDDEIDIRTLIFIFIIFIIFSRLFAGRGNYRGGGFTGGFGGFGGGSFGGFSGG SSGGFSGGGFSGGGGSSGGGGASRGI >gi|325480808|gb|AEXN01000023.1| GENE 7 6062 - 6649 967 195 aa, chain - ## HITS:1 COG:TM0961 KEGG:ns NR:ns ## COG: TM0961 COG1704 # Protein_GI_number: 15643721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 32 193 32 193 193 171 55.0 5e-43 MEINKKRKGIGGIVIAIIAIIALAIIVLIPSYNGLVKQKEQLDESYAQVQNVVQRRADLI PNLVSTVKGYSKHEKDTLTEVTEARAGIKDAKGPKELAEANEQMSQAIRNINVVAEAYPE LKADKQFTQLMDELAGTENRISVERKNYNGEVKAYNTKVKSFPTSIFASMMGFDKAEYFE ADASAQDVPKVNFGS >gi|325480808|gb|AEXN01000023.1| GENE 8 6676 - 7176 534 166 aa, chain - ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 160 1 165 168 153 50.0 2e-37 MRYGQIRKYDVANGPGIRTSFFVTGCHANCKNCFNNEYMNPNFGNLWTEKQTQEVISYLK KDEVEGLTILGGEPFESTEDLIKIVKKIREESDKSIWIFSGFLYEVLVNIENAKELLSMC DVLVDGLFVEELKDLRLKFKGSSNQRTIDIQKSLENEKVILLDGYN >gi|325480808|gb|AEXN01000023.1| GENE 9 7218 - 9338 2425 706 aa, chain - ## HITS:1 COG:HI0075 KEGG:ns NR:ns ## COG: HI0075 COG1328 # Protein_GI_number: 16272049 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Haemophilus influenzae # 4 706 6 707 707 487 39.0 1e-137 MPKVVKRNGQKVDFDKEKIKIAIEKAMNSPNGVFIENQAEEIANEIEKSVENKREISIYQ IEDRVYYKLIDKKNPATAKSYEAYRSVQAYKRAANTTDDDIIGLLERTNIDVMDENSNKN PLIASTQRDLIAGEVSKDLAKRKLIDADLVEAHEDGAIHIHDLDYLIQPIFNCCLVNMKD MLDKGTVINGKTIETPKSFQVACNVMTQIIAQIASNQYGGQSINISCLSKYLEVSYNKNY KLAKEILSNEDEIKKMAQKLTQRDLESGIQTIQYQINTLMTSNGQAPFVTLFMHTDENDP YLDQTVKIIEEILKQRIQGIKNEAGVYVTPAFPKLIYVLDENNVKKGSKYHYLTQLSIKC TAKRMYPDYISAKKMRENYEGNVFSPMGCRAFLPPYKDENGEYKFDGRFNIGVCTINLPQ IGILAGNDEEKFFEILNKRMDLVKRVGILRYEHLKDVTSDSSPIHFQHGAIARLKAHEKI KPLLKNGYATVTIGYIGIYEACKLVKGVSHTSDEGKKFAFKIMNLLNEKKEEWIKETGLQ FAVYGTPAENLTNRFASIDKKRFGQIEDVTDKGYYTNSFHVDVREEISAFEKFDFESKFQ DMSSGGCISYVEIPNMANNLKALGTIVEYIYDHIQYAEFNTKSDYCAKCNYDGEMLLNDD NEWYCPQCGNKDRSKLTVVRRTCGYLGENFWNEGRTKEIKARVLHI >gi|325480808|gb|AEXN01000023.1| GENE 10 9586 - 12165 1781 859 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 856 1 811 815 690 43 0.0 MDFNKFTQKSTEAINEASQLAIKNANPEVGIIHLAYALVEDSNSFVSQVLANMGLYKKVL NKMEEKMENLPSQSGSANIYPNTIFQRILLKSEDCAKKMGDSFISTEHIFLTILNENTEL SDYFKEIGLNAKNFSNELKKVRNGQKVTSDNPEETNNPLEKYGRNLTKEAREGKIDPVIG RDTEIRNCQRILSRRKKNNPVLIGKPGVGKTAIVEGLAQRIVNKDVPEPLQGRTIFALDM ASLVAGAKYRGQFEERLKSVIDEVKKSEGQIIMFIDELHTIVGAGKTEGSMDASNIMKPM LARGEIKVIGATTLNEYREYIEKDGALERRFQKVLVDEPSVEDTISILRGIKDKYEIYHG IRIQDQAVIAAAELSNRYITDRFLPDKAIDLMDEACATVRTEIDTMPEYLDEEKRRILQV QIEIAALKKEDDEKSKKRLEILEKELADAKERYEADFNKWKSQKDSINSVKDIKEEIDKV KVEIEKAERNYDFEKLSELKYGKLTELEKKLKEKEKDQENNSSIKEEVTDEDIADVVSNW TNIPVNKLVESERSKILGLADKLHERVIGQDEAVDKVSDAIIRARSGLKDINKPIGSFIF LGPTGVGKTELAKSLAEAMFDSEKNMIRIDMSEYMEKYSVSRLIGAAPGYVGYEEGGQLT EAVRRNPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTIIIMTSNIGSS YLIDGLKEDGTIDEENRKLVDGALKASFKPEFLNRIDDIVMFKPLTSDQVYKIIDLQIED ISKRLEDRDITIELSKAAHEYILEKSYDVEYGARPIKRFLQANIETNLGRKIIEGNIMEG DHVIIDLDKNNELAYQVKN >gi|325480808|gb|AEXN01000023.1| GENE 11 12175 - 13128 1130 317 aa, chain - ## HITS:1 COG:all1488 KEGG:ns NR:ns ## COG: all1488 COG2214 # Protein_GI_number: 17228981 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Nostoc sp. PCC 7120 # 3 314 8 299 315 172 33.0 8e-43 MKYQDYYEILGVDKKADADEIKKAYRKLAKKYHPDLHPDDKEASEKFAKINEAYEVLSDE NKRKQYDMFGQSGNFSQGQNFDPSQYGFSDLFSNFGSGNGSYTYTSSTGGSSGFSDFFET LFGGGRTSSRSSSTNFGGFGSSFKNGFTKAKKSKIKAKVNISLDEAMSGVYRTLKLKDKE TNSIKEININIPSGMTSGKNLKIDGSKYNLNADIYVKVQIKEDSTYRLDGLDIIKKERIS PWDAYFGEKITVDSPNGKFKINIPEKIEAGNKIRIKGKGYKDLKGKVGDLYVEILIDNPK DLSEDQIDLYKKLKELN >gi|325480808|gb|AEXN01000023.1| GENE 12 13685 - 13807 105 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKTEKINLVNDYLSTYITGEDENALSAFTLKKYMMIKNL >gi|325480808|gb|AEXN01000023.1| GENE 13 13927 - 14361 498 144 aa, chain - ## HITS:1 COG:BS_yveT KEGG:ns NR:ns ## COG: BS_yveT COG0463 # Protein_GI_number: 16080481 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Bacillus subtilis # 5 130 5 130 344 109 41.0 2e-24 MEKKLTIIIPVYNRESTIEQTIESIENQTIKDFEILTVDDGSSDNSKNVIKKLMEKYRNI RYIYQENAGVSSARNTGIKNAKTKYISFLDSDDFYEEKFVEKMLNKIEENNSDIVCCGYY KKNNNDKRKVRTLFRKKEFYLITY >gi|325480808|gb|AEXN01000023.1| GENE 14 14408 - 14926 735 172 aa, chain - ## HITS:1 COG:alr4582 KEGG:ns NR:ns ## COG: alr4582 COG0503 # Protein_GI_number: 17232074 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Nostoc sp. PCC 7120 # 1 170 1 172 172 190 55.0 1e-48 MDIKSTIRVIEDYPKEGISFKDITTLLKNKQAYKETMDLMAEKLKDLDFDYIIGIESRGF IFGAALADRLNVGFIPVRKPGKLPGQIKSLSYDLEYGQSKIEIHEDSLNKGDKVVIVDDL IATGGSAKACASLVESLGGEVVCLEFLIELTDLKGRDELKDYKVISLIKYDH >gi|325480808|gb|AEXN01000023.1| GENE 15 14937 - 15842 1108 301 aa, chain - ## HITS:1 COG:BH3647 KEGG:ns NR:ns ## COG: BH3647 COG1316 # Protein_GI_number: 15616209 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 6 293 16 313 359 140 31.0 3e-33 MNIKKKLIKAVLIILMLITVGFAFIFIKGFISSAVVKDENKFTGEDLGKGNKIEQKNENE LLFVFAGVDSTGEKLNTRTDTLMLVLMNKDTKSIDILSIPRDTRVYVEGNLDKINAAHSY GGMDETIKTIRNFLSIDLDYYAEVSFQAVEDGVDALGGVEINVPEQIASAQGIKPGLNYF DGKQALDYCRFRKGYANADLGRVACQQDFVVQFIKNMTKIKNIIKIPGVVSKINSNMDSN IKMSTILSFAWAFRNIDDAEINTQTIPGYPDMIDGISYYIPDNEATIDIRNKILYNYLLE E >gi|325480808|gb|AEXN01000023.1| GENE 16 15852 - 16325 484 157 aa, chain - ## HITS:1 COG:BH1234 KEGG:ns NR:ns ## COG: BH1234 COG2426 # Protein_GI_number: 15613797 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus halodurans # 24 153 1 130 134 80 36.0 2e-15 MQNLIEVIRSNFSNQVALIIISMLPLIELKGSIPIGLAMGLKPFQTYIYSIIGSIVPAIF ILMWIMPIFDYMKKKDSLKKLVAWAEKKAKKKEGNIKKYEYLGLFLFVAIPLPGTGIWMG SLIASILGLKKMKSFLTISVGNVIAGIIIYTFSSFFF >gi|325480808|gb|AEXN01000023.1| GENE 17 16423 - 19059 2655 878 aa, chain - ## HITS:1 COG:mll7848 KEGG:ns NR:ns ## COG: mll7848 COG1368 # Protein_GI_number: 13476512 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Mesorhizobium loti # 462 829 228 593 653 132 26.0 4e-30 MYNCIVKVYNNLILNKKEFNKRKEGIKIKKDRKLKISSFVVSLIIMLFLQSFIEDFSFKV YTNENIEISQSESGSQYSDNFKINSIYQGDKLLDLDKVEMKGWKKSNTKTGYPIQTNGYS KDNKLSFKPSPSLMFNKLTVNFETGPEYATAVMSYLKDHTMTMYANSTDNRSYVDINYTD FLSIVGQSLIFIGSIILFSFFIYNILKRIKDLENNKILYIIKDYSLNFIVFAISLFGMLK IKNHVTDEVYTRFFNAPYTYKDIIVFVSMVFLASLGIKSIYKKYPENKKINITNWVLFIL NPFLSFYILESAYNPNFSSMELIYVLINALILFLIQVLIYIVIRKKRLSMIFILLISIAF GIANDALYILRDSPLIPAFLGSLGVAADVAKDTVIQLSGHSLMAFSLASLWMFVISSINE GKIKISKKSYVKQLVGYASMFAIITVVSVNYFIKQNGVGVNLWRPSRTYYVEGSPYSFYR IFANQILTAPKGYDEKEVENTLEEYYNKDIGTKDTKKPNIVIIQSEALADYYGKGNLKLS ENPIAFQRSLDENAIQGNAYVSVLGGGTVNSEYETLTSVPLTFFPLGAYPFQQYVKDGHT SVARVLEDQGYQTFITHPNKPTNYSRQEVWPNLGFKNVAFLGDYDNSPESFEPTNGFMKD SVAFDKIKEQFENKSSDKPLFAYLVTMQNHGGYTSNVPGDIKVLNETNGDDQGASHYVNL LKKSDEDLKNLVEYFKSYKEPTIIAIFGDHQPQNYDVFMKLIKSGGNYTNKDVFYTPLTI WANYDIDEEKDVNISVNQLTPYLLEKAGGIKLSAYQKYMLDMHKDYPIISTKQIYNNKGE EVSKDEEFQKRNNKLNSLIYYEMKQDTKSDKYFNKASK >gi|325480808|gb|AEXN01000023.1| GENE 18 19156 - 19668 537 170 aa, chain + ## HITS:1 COG:CAC0297 KEGG:ns NR:ns ## COG: CAC0297 COG1982 # Protein_GI_number: 15893589 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Clostridium acetobutylicum # 9 167 13 180 481 74 31.0 1e-13 MLNEKLDIYIKDDYYPFHMPGHKRNKKILNKKISYQRDITEIRNFDNLNDPKTIFKDMED KLKEIYKANDFIISTNGSTCGILSSLRTLTKDNKKILVQRNSHKAVFNAIEVFDLNFDFI GVKTDENDMAYDIDYKDLAEKINKNSYSLVFITSPSYEGYMVDLKKIKNL >gi|325480808|gb|AEXN01000023.1| GENE 19 19698 - 20495 611 265 aa, chain + ## HITS:1 COG:CAC2338 KEGG:ns NR:ns ## COG: CAC2338 COG1982 # Protein_GI_number: 15895605 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Clostridium acetobutylicum # 19 252 221 470 487 97 30.0 3e-20 MAHGSHTILSEYEKNFTYDLAITSFHKNLSALTPASGIIVKNKNIDRKELRRNMAIFQTS SPSYLISESIDDMIENFPIFFRLWDNLLANLNDLYKLKLKHLKFINSDKKDLSKIVISCK NTNINGNDLADLLYKEKIEIEMANTSYVILISSIFDTKKGFERLKSALIKIDSSLEYKKS NFKFYFLDSEKKYSINEALNKNISKISLDKAQNKVSGSYIYAYPPGIPLLLPGEIINKDI IYQIKYLDMMGVDLSIDDFEIPIID >gi|325480808|gb|AEXN01000023.1| GENE 20 20549 - 20698 233 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRIITLNTRNLHKSKKDGGCGECQTSCQSACKTSCGVANQECVNTKNK >gi|325480808|gb|AEXN01000023.1| GENE 21 20764 - 22149 1686 461 aa, chain + ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 1 448 3 449 454 419 47.0 1e-117 MIHQYKAKGYNIVLDVYSGSVHLVDEISYHIISLLNKNKDKAYIENEIKNLHNINQEQFD EAYDEVKDLVDEKVLFSEDDFKDLTIDMDKRKTYLKAMCLNVSHTCNLSCEYCFAKEGRY HGPEAIMTDEVAKKSIDFLLENSGSHYNLDIDFFGGEPLLNWDLVKNTVDYARSKEEEFN KHFNFTLTTNGMLLDDEKIEYLNKNMKNVVLSLDGRKEKHDEFRKTHDGRGSFDKIVPKF QKLVKARGDKEYYMRGTFTANNLDFTEDIKTYLDLGFKRTSLEPVVGNNEEDYALKEDHL DRIYQEYEKLADMMIDAIDKDDKFIFYHYMIDLNNGPCVYKRISGCGSGSEYMAVTPMGD LFPCHQFVGNDDFKIGNVFEGIKKPEIIKNFKKNNLYSQEKCKDCWAQMYCSGGCAANNY NAGGDINKIYDYGCKVFKKRIEMALAVKIHEFLKESEKEEA >gi|325480808|gb|AEXN01000023.1| GENE 22 22174 - 22785 393 203 aa, chain - ## HITS:1 COG:TM1584 KEGG:ns NR:ns ## COG: TM1584 COG1040 # Protein_GI_number: 15644332 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Thermotoga maritima # 6 200 10 202 202 66 26.0 4e-11 MDDDLCLFCKEEVKENFSLCQSCLNKLDYVDNEFEILGHRARVLYFYNPFMASLIGDYKF NRNTSLYKVFGQMVFSFIKEKSMDNFDYILTTPSSKSVVNNRGFDHVRLICDFFIKNTHM TYLKNFKKIKNTKAQHQLSREERAKNLRNSFVFQGDLTGKNILIFDDIITSSNTVKEIIR TIEKANPKNIEILALASSHRVKK >gi|325480808|gb|AEXN01000023.1| GENE 23 22803 - 23234 404 143 aa, chain - ## HITS:1 COG:CT033 KEGG:ns NR:ns ## COG: CT033 COG0507 # Protein_GI_number: 15604751 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Chlamydia trachomatis # 1 131 601 720 746 114 46.0 4e-26 MQVRNNYDLESLDPSNFDDGVYNGDIGRIIELDKERESLKIEFYDGNIVSYKKEDIKDLD LSYAITIHKSQGSEFDCVVIPMMPTSFMLLSRNLLYTAITRAKKLVILIGEKRILKQMVR NNKTSQRLTNLSFWIKELSEALK >gi|325480808|gb|AEXN01000023.1| GENE 24 23323 - 24957 1595 544 aa, chain - ## HITS:1 COG:CAC2854 KEGG:ns NR:ns ## COG: CAC2854 COG0507 # Protein_GI_number: 15896108 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Clostridium acetobutylicum # 6 542 7 556 739 339 40.0 1e-92 MKFEGIIKSIIYRNEENGYTVLSLETSDSPITCTGIMPFFNENDQIIIEGDLIYHDKYGE QIKVESASLKKPSGKKAIISYLASGNIESIGKKTAQLIYEKFKDDSIDVVFNQSEKLLTI PGIGKKKLEKIKESTLDARDSREALLYLQGLNISFNLANKIYKAYGDNTISIVKTNPYKL SEDISGIGFIMADNIAMNMQMKSDSKFRISAALSYVLKNDAEMPGSCTIRLDDLIDKTFS LIKVDRNKIKDQINEDLINSKIQIMKIGNEEFVYDKDIYKAEKSTAINLSRLKNEKYIFD LEINEDLDAFSKQQQVAINEAFNNMLLVITGGPGTGKTTIIKAICNILDDNNLKFKLAAP TGRAAKRMQESTENSALTIHRLIGIKPESPIPEYNEENPLDCDYVIVDEVSMVDIKLMDK LLKALSSNTALILVGDHNQLPSVGPGNVLKDILDTDIKSVRLNKIFRQAQESNIVVNAHR INDGLYPILNQKNKDFFFIDSNANNFQKDILDLIKNRLPNYYKLDPINDIQILAPSKKIF LGCP >gi|325480808|gb|AEXN01000023.1| GENE 25 24957 - 26237 1737 426 aa, chain - ## HITS:1 COG:BH3749 KEGG:ns NR:ns ## COG: BH3749 COG0766 # Protein_GI_number: 15616311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Bacillus halodurans # 5 421 2 416 440 431 55.0 1e-120 MNNEEILVVRKNGPLKGEVYISGAKNSALPILAASLLASEEVILDEVPKLKDIEVMVEIL RSLNAKVDYLTETTLKIDSSNVNKFETPFELMDKMRASFIVMGPLLSKFGHAVTKAPGGC NIGKRPIDLHLKGFEALGAKTTMNHEEISSKAKNGLKGEVIYLDFPSVGATENIMMAATL AEGETVIENAAKEPEIVDLASFLSKMGAKITGAGTSNIIIKGVEKLRGTRHTIVPDRIEA ATYMLAAAITGGDITVKNVLGSHIRPIIAKLIEIGVEIDEVEDEDIIRVKASKKLKPTNI KTLPYPGFPTDAQSQFMALMTVCKGESSVVETVFENRFMHVDELKKMGAAIITEGNRAVI VGVDKLHGAEVKATDLRAGAALILAGLIADGETKISDIYHIDRGYSDLIEKFTKLGALIE RKQVNK >gi|325480808|gb|AEXN01000023.1| GENE 26 26247 - 26876 939 209 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 1 209 1 209 209 275 61.0 5e-74 MGKVTVLDHPVIKHKISILRDKNTGSNEFRSIIREITILLAYEASKDFTLEEYEIETPIC KTTGYRLSGKKLGIIPILRAGLGMVDGLIEVFPAARVGHIGMYRDEETMKPVEYYLKIPK DSNKRDMLVVDPMLATGGSACDAIQRLKEKGCTSLKLLNIIAAPEGIKKVQEEHPDVDIY IAQLDEKLNDDCYIVPGLGDAGDRLFGTK >gi|325480808|gb|AEXN01000023.1| GENE 27 26887 - 27924 1031 345 aa, chain - ## HITS:1 COG:CAC2882 KEGG:ns NR:ns ## COG: CAC2882 COG0009 # Protein_GI_number: 15896136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Clostridium acetobutylicum # 1 345 1 350 350 306 45.0 3e-83 METEILKIDRENVDENILKHAAKIIKNGDLVAFPTETVYGLGADGLNPEASRKIFKAKNR PEDNPLILHIDEDYKLDELVEKVDERTKFLIKNLWPGPLTVILKKSSKIPDIITGGGDTV AVRRPKDKLAREFIKFCDRPIAAPSANISGRPSPTNAKDVFYDMNGRIPLIIDGGSSDIG IESTVIDMSLENPCILRPGYYTYEYIKKFIPNVCLDDSLLDDTKVPRSPGQKYKHYAPKA QMKVFVGEKSVEKINDLALKYKNDGKKVGILVFNKYTEKFSSYITLSLGDKENLIEMSHV LFEALRDLDRKGVDIILAQGVEEIGLGKSIMNRMKKSASGNIYNL >gi|325480808|gb|AEXN01000023.1| GENE 28 27896 - 28900 1042 334 aa, chain - ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 1 322 11 333 403 203 35.0 3e-52 MFDFLAKRFVEDYKSIENESVRLKLISLSGFVGILINAFLFLIKISIGLIASSSAILGDA FNNMSDALTSLITLIGAKASSKPADKKHPYGHGRSEYIASFLVSILIMFVGFLLFTNSID SFYKGNLPKLSRLSIIILILSLGFKFYIYFLNRNLDKKLDSKLNFAVMIDARNDILSTIS IIIAVILQKYINFNLDSLLGMILSIIVFKPGLELFLDTIDKLLGKGIGKDLHQKIEKIIM DGDFVHGYHDLYIHEYGRGKLVGSCDVEVPSNISVGIMHQAVTNIELRLKNELNISITIH MDPTYCLIENEENKKIIEKLRKSVKNGNRDIENR >gi|325480808|gb|AEXN01000023.1| GENE 29 28901 - 29974 1458 357 aa, chain - ## HITS:1 COG:CAC2884 KEGG:ns NR:ns ## COG: CAC2884 COG0216 # Protein_GI_number: 15896138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Clostridium acetobutylicum # 1 355 1 355 359 390 57.0 1e-108 MLENLEHMRENFKELEKKLADPEVLSDTDKFKKVSREYNQLKPIVEKYNEIRAAEDMIEE NTELLKEAEDKEMIDLLKAEIDENKKNLEKYNEDLKILLIPQDPNDHKDVIVEIRAGAGG EEAGLFAGNLYRMYHMYADKQNYKTEDIDVSSQGIGGMKEATFIVRGEGAYSKLKYESGV HRVQRVPETESGGRIHTSTATVAVLPEADEVDIKIDPNDIRTDVYRSSGNGGQSVNTTDS AVRLTHIPTGLVVTCQDEKSQIKNKDKAMRVLRARLYEMEEEKRQKEISDNRKSQVGTGD RSERIRTYNYPQGRITDHRINKTIYQLDDFLDGNIEEMIDSLITEDQTRKLKTMGED >gi|325480808|gb|AEXN01000023.1| GENE 30 29984 - 30775 756 263 aa, chain - ## HITS:1 COG:SP1021 KEGG:ns NR:ns ## COG: SP1021 COG2890 # Protein_GI_number: 15900892 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methylase of polypeptide chain release factors # Organism: Streptococcus pneumoniae TIGR4 # 17 260 23 273 279 161 41.0 1e-39 MKIKDILEKENDDLIIALTYLLNTNKNLLYLKKEEKLEKDIEEKLLKIQDKISKGYPLQY AIGKWNFYGLDLLVDKRALIPRYETEILVDMIINDKVKKDKILDIGSGSGAISLALSYNL KNSKVLGIDISKDAINLSKENKKNLSIKNVEFKESDIFSNVEGKFDIIVSNPPYINKEDF ENLDKKLSYEPQNALLGGDDGLFFYRKIILNAKKFLNKNGKIYLEIGYDQKNPIINLLKE EGYKDIRAYKDFNDFDRIIIACI >gi|325480808|gb|AEXN01000023.1| GENE 31 30811 - 31017 325 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227499756|ref|ZP_03929856.1| ribosomal protein L31 [Anaerococcus tetradius ATCC 35098] # 1 66 1 66 67 129 86 4e-29 MKKELHPEYHQAKVVCTSCGNEFTVGSTEEEIKVEVCSQCHPFYTGKQRFSDRGGNVEKF NKKYGRNK >gi|325480808|gb|AEXN01000023.1| GENE 32 31082 - 31672 403 196 aa, chain - ## HITS:1 COG:SP1720 KEGG:ns NR:ns ## COG: SP1720 COG0398 # Protein_GI_number: 15901553 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 6 184 15 194 205 126 36.0 3e-29 MKVRTKNIIDLISVLVLLISIYLGYKGYKMGIFTSVSSLRKFLNQYGVWAPIIFMILQII QIIIPVIPGGLTTAFGVVMFGPLWGFIYNYISICLGSVIVFFISRFFGKEVVLAIFGKEN FQKYHKWLRHEKYNKFFAWAILLPVAPDDFLCYFSGLTDMEFKTFVKIILFCKPPSIFLY SMGLVLGIKTIFKSFA >gi|325480808|gb|AEXN01000023.1| GENE 33 31724 - 33073 1711 449 aa, chain - ## HITS:1 COG:CAC2889 KEGG:ns NR:ns ## COG: CAC2889 COG1158 # Protein_GI_number: 15896143 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Clostridium acetobutylicum # 4 432 5 467 483 395 49.0 1e-110 MDIDINKLEGLKLDELREIGKELSIKSVSSYRKNDLIEIIKDTYEKESLYDKNHSDEGYD QNDNFDLGEKFNCEGLLDLHEDGFGFLRTELYESSNDDIYVSPKQVKMFRLKTGDFIKGI ARVKKDKDKFSPLIFVSDVNGLKAADAFNRSNFESLTPIYPNQRLKLETSKDNISQKIID IIAPIGRGQRGLIVSQPKAGKTTLIKDIEYALEKNFDDLKILVLLIDERPEEVTDFKRFV NQYRDKDNELTRTEVAASTFDKAPQNHIYMQEMVLERAKRLVEDNKDVVILLDSITRLAR AYNIMTPQSGRTLSGGLDPLALVGPKKFFGAARNIEGGGSLTIIATALVDTGSRMDDMVY EEFKGTGNMELHLDRNLSQKRIFPAIDIEKSSTRKDNLLLSEKEIDAVYKIRNSSMKDKS EFTKELINLMGKCQSNEEFVDIINKTYKI >gi|325480808|gb|AEXN01000023.1| GENE 34 33126 - 33992 1314 288 aa, chain - ## HITS:1 COG:CAC0827 KEGG:ns NR:ns ## COG: CAC0827 COG0191 # Protein_GI_number: 15894114 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 287 1 287 287 399 71.0 1e-111 MLVNAKEMLDKAYENGYGIGHFNINNLEWTKAILETCQEKNSSVILGVSEGAAKYMGGFN VVAKMVQGLDKDLNITVPVALHLDHGSYEGAKKALEAGFTSIMFDGSSLPIDENVEKTKE IVELCHAKNVSVEAEVGGIGGEEDGVVSTGELADPEECKKVASLGVDFLAAGIGNIHGVY PENWQGLNFERLEEIKDAVGKLPLVLHGGTGIPEEQVKKAIERGVSKININTECQIVFTE ATRKYFEENKDKEAKGFDPRKVLKPGFEAIKDKVREKIEFFECENSAK >gi|325480808|gb|AEXN01000023.1| GENE 35 34002 - 34094 58 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGINQIPSLVSITKDRKNGNDFNINLLKNI >gi|325480808|gb|AEXN01000023.1| GENE 36 34067 - 34300 207 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325847802|ref|ZP_08170024.1| ## NR: gi|325847802|ref|ZP_08170024.1| hypothetical protein HMPREF9246_1752 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1752 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 77 1 77 77 106 100.0 5e-22 MQIIDHKISPKYIRELLVDNSKIIALFHANWSNFSIKVKEDFLKEEEDSYKNIRKIIIDI DKNRDLLKKWVLIKYHL >gi|325480808|gb|AEXN01000023.1| GENE 37 34291 - 36009 2123 572 aa, chain - ## HITS:1 COG:BS_proS KEGG:ns NR:ns ## COG: BS_proS COG0442 # Protein_GI_number: 16078720 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Bacillus subtilis # 1 557 1 556 564 536 49.0 1e-152 MRLSNYYMPTLRDDPQDAETQSHKLLVRGAFIRKTSSGVYSYLPLGMRVINKIENIVRKS MEKYDSIEVSTSVLQSKDIWEKSGRWQNFGPEMFKIKDRHDREYCLGPTAEEQFTSLIKD ELNSYKQLPLNLYQIVSKFRDEKRPRFGINRSRDFIMKDAYSFDVDMEGLEKSYQKMWDA YVEVFDALGLDYKIVEGDSGAMGGNTSHEFMALAETGEGEIFYTENSDYAATDESAKFFL DIDENEEEKEIELVQTKDTKTIEEVSNFLKIDQNKCAKAVDLLVQGNPVLVLVPGDRELN MAKLISYLQVPEHEIEMMDDETIRKITGAEPGFTGPKDLKEDVRLIVDKSITRYRNLVIG ANKTDHHFINANFKRDFDGEIADDLLTAKEGDLSLDGKEELKIARGIEVGNIFQLGTKYS ESLEAYFLDENGKQKPFIMGSYGIGITRSISAIIEQNYDDNGIIWPTKVAPFEAWITLVN KNKEDQKQLAEKIYESLLDQGIEVMLDDRKERAGVKFNDRDLVGCPYRITVGKDASDDIV EFSKRSDMENLKMSSDEAIEKIVTSIKEDLCK >gi|325480808|gb|AEXN01000023.1| GENE 38 36075 - 36566 733 163 aa, chain - ## HITS:1 COG:BH1515 KEGG:ns NR:ns ## COG: BH1515 COG2190 # Protein_GI_number: 15614078 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus halodurans # 1 139 5 146 173 134 49.0 8e-32 MFNFFKKKKNDEKKVSIASPVNGKVVKLEEVPDPVFAEKMVGDGFAVIPSDGEVFAPVSG EVTLQPDGYHAIGIKTDEGIEVLVHFGLETVELKGDGFTPHIKVGDRVNKGDKVLSVDIE KIKDKVPSLITPCIVANLEANTLSEINFDANCGDEVQTVTIVE >gi|325480808|gb|AEXN01000023.1| GENE 39 36570 - 38273 178 567 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|210464454|ref|ZP_03287148.1| 30S ribosomal protein S1 [Candidatus Liberibacter asiaticus str. psy62] # 321 567 60 270 576 73 26 4e-12 MKAQSEEEALSFAKKYIKEGIDDEADAINKSLDILAEDVANNIEAKNIIRRDGLVRARIL AEKKEDEDLTYENYYDFNEKIKNLKPFQILALNRAEKNNDLTVKLEFTDNYNLTLIKNLY KSNNDYTESLIKKAIEDSYKRLLIPTITTEIKNKLTEKAEEESIKVFSKNLKPYILQRPI KDKNIIGLDPGYRTGCKVAVIDKHGKYLDQAVIYPVKPHSKEREAIEILKNFIKKYHVDI IALGNATASRETEAVVNKLLKEVEGVSYAIVNEAGASVYSASKLGEEEFPDLDVTIRGAI SMARRLQDPMAELVKIDPKHLGVGQYQHDINQKKLDEELSKVVEDSVNEVGVNINNASYK LLSYVSGLNLNLAKRIEEDFKNGEIVERKDLKKVKGLGDKTYKMAAGFLRFPDSPNFLDN TAVHPESYKIAKKLVDYDLENIDLEKCATDLDVGVLTLEDIIDELKKPGRDPRDELPEVI TKSEVLSINNLKEGDILEGTVRNITEFGCFVDIGVGIDGLVHISNMSDKFIKDPNEIVTN SDIIKVKVIEIDKKRERIGLSMKNIKE >gi|325480808|gb|AEXN01000023.1| GENE 40 38297 - 38656 246 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|87310993|ref|ZP_01093118.1| ribosomal protein S1-like RNA-binding domain protein [Blastopirellula marina DSM 3645] # 6 115 11 119 1043 99 46 6e-20 MEISKILSEELSIKEKSIDEVIKLLDEGSTVAFIARYRKEKTGGLKDTEIRDIESGLTRL RNFQKRKEEILTSLENQEKLDEKLKEQIDQAKTLTELEDIYAPFKKKEKQGLIRQKNLD >gi|325480808|gb|AEXN01000023.1| GENE 41 38807 - 39991 965 394 aa, chain - ## HITS:1 COG:no KEGG:Apre_0746 NR:ns ## KEGG: Apre_0746 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 18 394 19 394 394 193 36.0 1e-47 MDNLNYDRIYAILNEINIPLVIVAFLVGLVILFLISKVLLKLGMFLLVFTFIFDMVIRLI PFDIYANFPTTKLIIWVMYGIGFFIFAYKNIKRFMKNKKKKELFKDKKPVEKENSKDNPI KKFFSYTGSLPFLLMLILNIFAPGDGIYKNILNLLTSLSFLFMVFTTLYNTYKRVDTMKE NKGRMRFDDLNIPFKKKSPNISKNNDRKVLKKENDSHNNIEKEEDLDKTQTRRLNLNDIE DELNKEKFDHINLDDFKNNMDQNDLINLINDKNNKLTTMISLTNLSDGVKKSYKSNKCIA DIRQDNEFKVDLEFENFNDYDYGRFIDLLLDYSKNRGKYKFQLDLIPQKAKNSKVVFYDP SNLYELDREFGDKFQGRTISMNFPKYKINYITEN >gi|325480808|gb|AEXN01000023.1| GENE 42 40508 - 41962 1759 484 aa, chain - ## HITS:1 COG:VC0687 KEGG:ns NR:ns ## COG: VC0687 COG1966 # Protein_GI_number: 15640706 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Vibrio cholerae # 1 477 1 478 494 319 41.0 8e-87 MILFFIGLAILIFGAMLYSKVVESQFQPDDRETPAVRKADGVDYVTMSKKKNWLINLLNI AGTGPILGPIQGILFGPIAFLAIPLGCVFAGAVHDYATGMISMRNGGSQVPKLVGKYLGT NVKRFYNVVIAILLLLTGTVFVYTPGDLIAHDIMGLSPNSNVIWIIYGIIFIYYILSTVL PIDKLIGRIYPIFGAFLLISSLGVFIGILMKGLSHLQFEGHGLFYDHPDGQKFIPSFFIT VACGILSGFHGSQVTLVSRTVAKEKEAMGTFYSTMITEGFIAMVWAAGALVLFSSGKSAL DTAGTLMVGQISRNFMGSVGGYLAIIGVIALPITSGDTAFRSLRLIVSEELNIDQRSGFK RAIVAAVLFVPAVIILVFAKSNPNGFNILWRYFGFTNQFVAIFALAVATTYLIINNKKYL MTLIPGIFYTFIVFTFIISAKKIGFGLDLKIAYALGSIIAVLYGVFIVKNANKRRNEIKN IILD >gi|325480808|gb|AEXN01000023.1| GENE 43 42083 - 43381 422 432 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227372256|ref|ZP_03855738.1| SSU ribosomal protein S12P methylthiotransferase [Veillonella parvula DSM 2008] # 1 368 1 374 449 167 30 2e-40 MSKTFNIKTLGCKVNQYESEAIEELFKKRGFEKKEDNADIYVINTCTVTNMSDRKSRQTI SKARKENKDAIIAVIGCYSQVKGDEVKEIEGVDIVLGSRNKEEVVDLCENFINDHVKTKD VEEFKIGEAIEDLEISNQADMTRAYIKIQDGCNMYCSYCLIPYARGNIASRDLVSIIDEA KRLRDNGFKEIVLTGIHVASYGKDLDLNISLIDVIEHISKIDGIERIRLSSMEPRHIDRE FLQRMKDTKKACDHFHLSLQSGSDDVLKLMNRKYDTKIFKEKVDLIREYFPNAGLTTDII VGFPNESEKNHEQTKDFVRDIKFSKTHLFKYSKRDGTKAASMKDQVDGNTKKRRSKELSV IEKKNSHEFLDNQIGKTLSVLFETKTELDGYKSGYSTNYLRVHTKDDVEINEIKDIKITQ RIDDYLIGQIIS >gi|325480808|gb|AEXN01000023.1| GENE 44 43381 - 44496 1454 371 aa, chain - ## HITS:1 COG:ECs0015 KEGG:ns NR:ns ## COG: ECs0015 COG0484 # Protein_GI_number: 15829269 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Escherichia coli O157:H7 # 2 371 4 372 376 301 44.0 1e-81 MKDPYELLEVDRNVTDSELKRKYRKLAKKYHPDLNPDDDEAQEKFKEISEAYEILSDPQK KRQYDTYGAAAFENGGGAGGFSGGFGGFDDIFGDIFGDIFSQGRSQQRRRARKGSDIQQV VKLTFKESAFGISKEIQVRREVECETCHGKGAKDESKIKTCPKCNGTGVINNVSQTPFGT VSRQTTCDHCHGTGEIIEEKCPDCNGSGKKIKNEKIKVDIPSGVENDSVMRVVGKGNAGE NGGSYGDLYIILKVEEHEIFKRDGLDIYYEMPISFTTAALGGNIDIPTLTTTKEYHIPAG TQTGTKFRIKNEGIKSDRFKRQGDLYFYVKVITPTKLSKAQKEKLKEFSEISGDVVKEDK NFFEKLKDLFD >gi|325480808|gb|AEXN01000023.1| GENE 45 44688 - 46508 2708 606 aa, chain - ## HITS:1 COG:CAC1282 KEGG:ns NR:ns ## COG: CAC1282 COG0443 # Protein_GI_number: 15894564 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Clostridium acetobutylicum # 1 603 1 614 615 680 65.0 0 MAKIIGIDLGTTNSAVAVMEGGDSTIIPNTEGNRTTPSVVAFTKDGERLVGETAKRQAIT NPDRTISSIKREMGTDYKTGEIDGNSYTPEEVSAMILQKLKSDAEGYLNDTVTDAVITVP AYFTDAQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDKETDQAKIMVYDLGGGTFDVS ILEVGDGVFEVLSTRGNNKLGGDDFDNRLVNYLAAEFKKETGVDLTKDLTAMQRLKDAAE KAKKELSSTKTTNVNLPFITAVDGQPVHLDITVTRAKFDELTHDLVEATRKPVEDALKDA SLSSSDIEKVLLVGGSSRIPAVQDLVKNIIGKEPQRDINPDECVALGAAIQGGVLTGEVK DLLLLDVTPLSLGIETLGGVATKLIERNTTIPTKKSQIFTTAADGQTDVDIHVVQGEREM AADNTTLGRFQLTGIPAARRGVPQIEVTFDIDANGIVNVSAKDQGSGKEQKITITSSTNL TEEEIDKKVKEAEKFADDDKKKKEGIEVKNNAESLVYQARKTLEDAKVEGSEKDKIEEKI KDLEASIKADNTEDIKAKTEALQQEIYSMSEAMYKKAQAGQEGQDAGKSDDDVVDADYEV VDDDEE >gi|325480808|gb|AEXN01000023.1| GENE 46 46520 - 47056 752 178 aa, chain - ## HITS:1 COG:BH1345 KEGG:ns NR:ns ## COG: BH1345 COG0576 # Protein_GI_number: 15613908 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Bacillus halodurans # 37 176 50 192 194 97 44.0 2e-20 MDNEKKHDENVENTENIDEELEEIDAEIVDEDGNVEGDLSNDDNEYKEKYQRLLADFTNF KKREEKARNDFKKFASSNLIEELLPVLDNFDRALKDQDKDDSFVQGIVMTRDSLWKVLEK EGLEEIESDGVEFDPNFHHAFQTEENEDFKSNYIIETYQKGYKLNDRVIRPSMVKVAK >gi|325480808|gb|AEXN01000023.1| GENE 47 47074 - 48072 1256 332 aa, chain - ## HITS:1 COG:CAC1280 KEGG:ns NR:ns ## COG: CAC1280 COG1420 # Protein_GI_number: 15894562 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Clostridium acetobutylicum # 1 328 3 331 343 186 36.0 4e-47 MNERKKMILFSIINSYVNLGEPIGSKSLLNEYSLDISSATIRNEMSTLEKMGLLEKAHTS GGRYPSDKGYRLYVNNLLENSLNIREDEDLERILDKRYGNVSKIVETATLLLAKMTNLTA VSYTIRNNITKVINLEILKIDPNVLLFIVVYDNASIISDRIYMVDEINDDELANISTTLK ESIEGESLKDISKIFDRLKKNGFKKYENLLDILEKKINNDSLSDLTKEVIIKGLGNIFNF KEFEDPIKAKEFIKIFDSKERIWELIENSDSDLKITIGDENEINELKDNTIITSHFNYDK DIVGQIGIIGLTRIDYKEVISDIKLISDLLSK >gi|325480808|gb|AEXN01000023.1| GENE 48 48147 - 49271 1125 374 aa, chain - ## HITS:1 COG:SP1409 KEGG:ns NR:ns ## COG: SP1409 COG0635 # Protein_GI_number: 15901263 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Streptococcus pneumoniae TIGR4 # 7 367 9 367 376 247 37.0 2e-65 MEKIGIYIHIPFCKKKCFYCDFTAFPNLESRIDSYFENLKKEIILYQKNMDVEVDSIYIG GGTPTYVDFKYIEEIIDQLKIFDLSHVKEFTIEANPNSLSLEKLKAYKSLGINRISLGVQ SFDDEVLKKIGRDHNKEIVLKDIENIRKAGFDNLSLDMILNLPGGNFDSIKNDLEIIKKI NPQHLSYYSLILEKGSHFYSIYKKDKLKLMDDDLERDIFSYIENYLKNLGLNRYEISNFS KKDFESYHNKKYWSEGGYLAFGLGASGFLSNVRYNNVKNFVKYENLINEGKFPVEFREFI SNDEREKEYIIFKLREVEGIDLKEFENIFGHSLLEKYSKIIEKFYKEGFFEIDQSLKFTH KGFDLSNEFYIEII >gi|325480808|gb|AEXN01000023.1| GENE 49 49342 - 49518 221 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQRISYGKNLLDFKLKTSLKNRMSERSEFTVLEVFDLEIKNFCSQIFVLEGFSKFEAR >gi|325480808|gb|AEXN01000023.1| GENE 50 49524 - 51329 2263 601 aa, chain - ## HITS:1 COG:CAC1278 KEGG:ns NR:ns ## COG: CAC1278 COG0481 # Protein_GI_number: 15894560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Clostridium acetobutylicum # 3 599 5 602 602 752 62.0 0 MSKKENIRNFSIIAHIDHGKSTLADRLIEKTQSVAKREINDQMLDSMELEQERGITIKLK SVKLKYKANDGKVYDLNLIDTPGHVDFTYEVSRSLKACEGAILVVDASQGVEAQTLANTY LALEQDLEILPVLNKVDLPSARIDETKEEIENQIGLDTENIPLVSAKTGLNIDDVLEDII ENVPAPEDHDDKPLKALIFDSYYDSYRGVICYVRIFEGSVKAGDEILMMASGKSYEVTGV GYTMKNRIETKDLKSGDVGFIEASIKDIRNARVGDTITLKNNPTDSALSGYKEVLPMVYS GIYPAEGESYNKLKDSLEKLQVNDAALVFEQENSQALGVGLRCGFLGLLHMDIITERLER EYDLDIIATAPSVIYRVKTKGHEEKRLENPNDFPAPSEIDYVKEPITISEIMTPKDYIGP VMELAQSRRGELIDMSYIDENRVLIKYKIPLNEVIYNFFDSLKSRSKGYASLDYEVVDYE ESNLIKLDIKINEDRVDALSTIVHKDFAYARGRSIVEKLKDQIPRQQFAIPIQATIDSKV IARETVRALRKDVIAKCYGGDISRKKKLLEKQKEGKKRMRQLGSVQIPQDAFLAVLKYDD E >gi|325480808|gb|AEXN01000023.1| GENE 51 51329 - 51877 852 182 aa, chain - ## HITS:1 COG:slr1377 KEGG:ns NR:ns ## COG: slr1377 COG0681 # Protein_GI_number: 16329775 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Synechocystis # 10 177 21 188 218 117 36.0 1e-26 MTEKSNDLEFLDWIKTILLALVIAFFIKIFVMDATKVEGNSMLNTLHSGDMLFVDKVSKH FKGYERGDIVIIDAPDQADTLYIKRIVGMPGDNIEINDGNVYVNGEVYEENYINNDETLT TNENSSWQVKDGEYFVMGDNRLPNASNDSRNFGPISDQKIVGHAFLRFFPIYDIGFVDKE NR >gi|325480808|gb|AEXN01000023.1| GENE 52 52019 - 52285 288 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228004015|ref|ZP_04050999.1| SSU ribosomal protein S20P [Anaerococcus prevotii DSM 20548] # 1 88 1 88 88 115 64 8e-25 MANIKSAIKRIDVTRKQTARNKSVKSEIKTYVKKFEQAIENKDSEKANELFKTVDKKVKK AAAKNIIHKNQASRTSSRLAKKLNSLNA >gi|325480808|gb|AEXN01000023.1| GENE 53 52353 - 53366 1165 337 aa, chain - ## HITS:1 COG:no KEGG:Apre_1185 NR:ns ## KEGG: Apre_1185 # Name: not_defined # Def: DNA polymerase III, delta subunit # Organism: A.prevotii # Pathway: Purine metabolism [PATH:apr00230]; Pyrimidine metabolism [PATH:apr00240]; Metabolic pathways [PATH:apr01100]; DNA replication [PATH:apr03030]; Mismatch repair [PATH:apr03430]; Homologous recombination [PATH:apr03440] # 1 337 1 337 337 316 54.0 1e-84 MNYKEFMTDLFKKNTSGIYLIDSKEEYLKETIIDQAKDLISFPDFNYTEIKGKKSLEEIK TAMDTYPVMEDKKVLIWRNIDLSKNSIKEYDDICKLLIDDAKNIPEFLTLIVIAEDNVFK GKFYKTIKEYGNIVEIDRLNNNELVSFIGKRFVKNKKKIKKSYINEIIDRFSYLNKNSQI DLYEVINTVDKIIANSDKSEVSIEDVHDQLDKILDLNIFNLTDALSVRDSNSAMNTYLYM AKDMDEIFKIFHMIVRHIRNLIGIKVLTKASYNDAFIQKSLGISSFELRKDKGFVRNFSL DDLFDIQEFLYKCDLKQKSQDFDMNLNMLILIEKFSK >gi|325480808|gb|AEXN01000023.1| GENE 54 53363 - 55543 1082 726 aa, chain - ## HITS:1 COG:L0317_2 KEGG:ns NR:ns ## COG: L0317_2 COG2333 # Protein_GI_number: 15673754 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Lactococcus lactis # 472 696 7 256 282 111 32.0 7e-24 MRKNLFFLLISLLAGIGIFTLYEAYNFFYIIIGLLVWAVFLFMRKSSLSYLCLGFSLGLC LGIFSFSSYKLDKYDDLDLKLTVVDKAKSEDLYTYYVKARNKKEKINEKSSFISQKNFQI GQRLRANCKISWHKTNTNPYLFSYRKFLLSKKIKSKLDIKSYKNLGYSSSIFLKMKRSFR IYIEKIFGESLSKKSFLFIKSVILSERFDDREVLNKLGLSHILAISGLHIDLILTLLLFL LIKSGISYKYAYPISLGFCLFYGYLISFPFSVIRVLLMYSFSYLAFLLKKGRDMYKNLIL SMILILFFNPFAIFNSGFFLSFLAGFAIYVIYPSLVRGKKYSYIKKSLIFTLTLQVTLAF HIIYYYGFFNLLSFFANFLVIPIFTISMYIIFGIIILYPFLGGLLGIFFYILDFLIGSIL NIVSFLNSFSIFSLEFPKESILICFYYIILLFIMVKFTNKKMMAKKFLALSIFIVIFSII KDKNRPISFQMVDIGQGDFFILEDGKDVYLFDCGEISFKNYSSSEKIAIPLLKAKGVKKI KAVFVSHEDKDHMGSIEKLKNNFKLGPIISNKYNRNLGKIHSFKEMKEGDVYEGKNFKVR CLRNFDGRENDNSMPLLIEINNFKILTMGDLPGDKEEIIARDIDILKVSHHGSRFSTSKK FVKMTSPRLALISAGRKNTYGHPSKEVLENLKNIEICNSQRDGYCQIDFYKNSFKLKKYV KGGFFR >gi|325480808|gb|AEXN01000023.1| GENE 55 55598 - 56344 570 248 aa, chain + ## HITS:1 COG:no KEGG:Apre_1187 NR:ns ## KEGG: Apre_1187 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 204 4 203 204 90 28.0 7e-17 MNDLLYISHPQLNKIDSKIIKTKSEGKNTKIILDRSIFMPTSPFLLDENPRISGNEVSHI RFINGNLIHTVNNKIKSSSVKLSFDKDIRLKNMDYNTAFFIFKSLFLKYYNKKDLTLRIK DNYSQIKVSNFYENFSIDDFLRLFNKLIDLGLKINKDRDFVEIKGFDKDFNSGVYHNNTK YLQGIFVLSVEKIDETLLIDFITGSDYKNFTKNNIKVISEIKNISFSEINTSDKLRKIIS TIQKSTYI >gi|325480808|gb|AEXN01000023.1| GENE 56 56375 - 58783 3031 802 aa, chain - ## HITS:1 COG:BS_leuS KEGG:ns NR:ns ## COG: BS_leuS COG0495 # Protein_GI_number: 16080084 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Bacillus subtilis # 9 800 8 802 804 860 52.0 0 MREYNPNAIEKKWQKIWDEEETFKSELDTDKKKFYPLVEFPYPSGQGLHVGHPRPYTALD IVARKRRLEGENVIYPMGWDAFGLPTENYAIKNHIHPSIVTKDNIKNFKGQMKSIGFSFD WSKEVNTTDPNYYKWTQWIFIQLYKHGLAYKKEMPVNWCPSCKVGLANEEVVDGKCERCG SEVTHKVKNQWMLKITEYADRLIDDLDEVDYEEKIKTQQKNWIGRSHGAEINFSLKDKDY KLNVYTTRPDTIFGATYMVIAPEHPMLEEFKDEIKNLDEVKEYQDFAKKKSDFERSELTK EKTGVKLDGISAINPVNGKEIPIWISDYVLISYGTGAIMAVPAHDERDFEFAQKFEMPII PVIDTGDEDLPTTSIDKGLLINSDFLNGLTVADAKKKIIEFVEEKNLGSAKVNYKLRDWV FSRQRYWGEPIPMIYCEEHGWVAEKEENLPIKLPDVDSYEVTDDGESPLSKIDEFVNTTC PICGKPAKRETDTMPQWAGSSWYYLRYIDPNNNEDLASKEKLDYYTPVDWYNGGMEHTTL HLLYSRFWHKFLYDLGKVPTKEPYKKRTSHGMILGEDHQKMSKSRGNVVNPDDIVRDYGA DTLRAYEMFIGDFRSTAPWSDEGVKGCRKYLERVFNLYDLVEDGDEYTKELEILINQTIK KVSEDYESLKYNTAIAALMSLLNEMRNIGKITKKDYKTYLILLNPVAPHLTEELWEEIGF EGQLNQTSWPEYDESKLEFDSIELPVQVNGKVRATIKISKDADQEDAVTSAENDQNIQKY IDGKNIFKVIYVPGKILNLLVK >gi|325480808|gb|AEXN01000023.1| GENE 57 58793 - 60181 1666 462 aa, chain - ## HITS:1 COG:CAC3260 KEGG:ns NR:ns ## COG: CAC3260 COG0017 # Protein_GI_number: 15896505 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 16 457 19 460 463 555 61.0 1e-158 MKLSEIKKDVEKYIDQEITAQGWIRQARFTKNVGFIELNDGTIFKNLQVVVGKDLENFES IQKEHLSASLKVIGKLVKTNNAKQAYELQANKVEVLGHSDENFPIQKQKQSLEYMRTIPH LRVRTNTYRAVFRLRSKLAYALHKFFQEREFIYLNAPLITASDTEGAGEMFQVTTQNLEK PNLDKDGKVDYSKDFFGKKSYLTVSGQLEAEDYALALSNIYTFGPTFRAEESNTPRHAAE FWMLEPELAFADYNVCMDVAEEMMKYMIEYVLENCKDEIEFFNERIDDTLIERLTKVKNA KFARITYTDAIEKLKNADVDFEYPVEWGIDLQTEHERYLSEKIVDGPVFVTDYPKDIKAF YMRRNNDGKTVAAFDMLVPAVGELIGGSQREERYDELVKSMEDNGLKIDEYQNYLDLRKY GTVVHSGYGLGFERAVMYLTGMKNIRDVIPYPRTVNSFASKN >gi|325480808|gb|AEXN01000023.1| GENE 58 60162 - 61493 1183 443 aa, chain - ## HITS:1 COG:CAC0326 KEGG:ns NR:ns ## COG: CAC0326 COG2256 # Protein_GI_number: 15893618 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Clostridium acetobutylicum # 14 434 13 434 443 353 47.0 4e-97 MDLFELNRQRQLEKSAPLADRMRPENIEDFLGQDHLLGEGKIIRRMIKSDRIYSSIFYGP PGVGKTTLAKIISKSTNMAFEKVSAVASGISDLKKKIEIAKDNLKYENKKTILFIDEIHR FNKSQQDYLLPFVEDSTIILIGATTENPYFEVNKALISRMYVFELKAHTNEDLHKLIDMA LTKDKVLQNKNIKIDKDARNTLVKFSNGDCRALLNALEIAIFSQEDKEGIIEVDRQSILN SIQKKISIYDRNGDRHYDTISAFIKSMRGSDPDAAIFYLAKMLNSGEDIKFIARRMIIFA SEDISLADPYALSLATNTFTAINTVGMPEARIILAETCIYLSLAKKNNSTYLAINKAMDF VKNEKDLEVPNKLKDTHYKGSKDLVKDTYLYPHDYNGYVKQDYLPDGFVKEKFYESKDIG YEKILSKNLEKIKRGNEDEIIRD >gi|325480808|gb|AEXN01000023.1| GENE 59 61631 - 62083 357 150 aa, chain - ## HITS:1 COG:CAC1698 KEGG:ns NR:ns ## COG: CAC1698 COG1327 # Protein_GI_number: 15894975 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Clostridium acetobutylicum # 1 149 1 149 151 160 57.0 9e-40 MKCPYCDSNDTKVIDSRATEDNHAIRRRRLCQTCNKRFSTYERYEDQTLMVVKKDNTRES FDRAKLISGIVKSCEKRPVSMDQIEKIANEIEISINHIGKKEIPSSSIGKFVMDHLKKLD PVAYVRFASVYREFKDVESFYKEIKNLEND >gi|325480808|gb|AEXN01000023.1| GENE 60 62085 - 63188 1723 367 aa, chain - ## HITS:1 COG:CAC1693 KEGG:ns NR:ns ## COG: CAC1693 COG0206 # Protein_GI_number: 15894970 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Clostridium acetobutylicum # 10 367 2 366 373 344 59.0 2e-94 MKRGRKMANINMEVENNALAKIKVIGVGGGGNNAISRMREGGLSGVEFIALNTDLQTLNE ANADIKLQIGAKLTRGLGAGANPEIGEKAAEESESEIDESLKGADMVFITAGMGGGTGTG AAPVVARKAKEQGILTVGVVTRPFTFEGRKRQTSAEGGIEALKESVDTLITIPNDRLLQI VEKRTSMVEAFKMADQVLMDAVSGISELIAIPNVINLDFADVKSIMSDQGIAHMGIGRAS GENRAVDAAKAAVNSPLLETSIEGANAVLLNVTAAEVGLMEANEAAELIRDHIDSDANII FGVGSDESLGDDIKITVIATGFDQDSQKRRETIETRRPSQSTGQRPAQRSQKSSNPFDDI DLPDFLK >gi|325480808|gb|AEXN01000023.1| GENE 61 63204 - 63983 772 259 aa, chain - ## HITS:1 COG:no KEGG:Apre_1202 NR:ns ## KEGG: Apre_1202 # Name: not_defined # Def: polypeptide-transport-associated domain-containing protein FtsQ-type # Organism: A.prevotii # Pathway: not_defined # 14 251 30 269 269 157 43.0 5e-37 MSNKNRKRRKIKRKEKLFTPFFIVFLVILSLAILIYNFFNHEYFKISQVFIEGNKVLSDD QILKKLNNPVGKNIVLYDEKESIEKLKKDQIIKKISIDKEMPDKIVVKVKEEYPYMYTTY KKDKYIITNNGKVLDKTIKLNNKSLIKIKLPKKKPQIGKKFTDDKNILEFISLLQKLKYS KDIKEIDLENYNDIGIIIKDIQINFGDLKNYKYKLKLLDSVLKDIDNKKLKAYSISLDKG KNPVVEVEEKSLDEKDEDN >gi|325480808|gb|AEXN01000023.1| GENE 62 63985 - 65070 960 361 aa, chain - ## HITS:1 COG:BS_murG KEGG:ns NR:ns ## COG: BS_murG COG0707 # Protein_GI_number: 16078586 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus subtilis # 1 358 1 361 363 258 38.0 1e-68 MRVIVSGGGTGGHIYPAIAMCQKLEKEINDIEILYVGIKGKPEERIVKKYDYEFRPIEAM GLPRKISKRLFKSLITNFKGFKEAKKIIKEFKPDLVIGTGGYVCAPILYQASKKNIKTLI HESNSFPGITTRFLSNKVDLVCISFEEAKKHIKNQKNIHITGNPVRGNFNTNYTKEDLEK LGIKKDRPVVFSFGGSNGSKALNKAVQEMSNLMDGKFYLLHQTGPIFYDDFLKNTKENEF IKVFSYIDNIDLFYGVSDLVISSSGAMSLSEISSLEKASILIPKAYTTENHQEYNARTYL EKGASSMILEKDLTGEVLYKNIVDIIDDKEKLKKMGQMAKSLQNPDAADEIYKLIKNLME S >gi|325480808|gb|AEXN01000023.1| GENE 63 65071 - 66381 1302 436 aa, chain - ## HITS:1 COG:SPy1525 KEGG:ns NR:ns ## COG: SPy1525 COG0771 # Protein_GI_number: 15675424 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Streptococcus pyogenes M1 GAS # 2 427 10 441 452 257 35.0 4e-68 MKRVLVYGLGITGISTVKTLDKLGYEVFTYDKKKDKDERLEGYNYSPISDLKINEKYDFV VKSPGIRPDDEIVQKLEKNNQIISDIELSYRLFEDKKIISVTGTNGKTTTTSLITYVLNQ AGKNAISVGNIGEGILWQMYNKDAVFVEEVSSFQLHNTKTFKPHIGAILNISPDHIDWHG SFENYANDKLKLAKNQDKDDFLVINHDDKILSKNKNKFKAKIYEFSMKEKVERGIYLKDD SLYLKDEKDIFLLNKKDLKIVGNHNLANAACAMLCLYLYGIDLEKVIKYTKTFKAIEHRL EFVKKVKNVPFYNDSKATNVDSTIKAIDSFDKNIILLAGGYDKKIDYSPMFEKENGKIKA MILLGQTKYILENLCKKYKVKYFLVDNMQMAVDKSFEIMEDSDTVLLSPASASWGMYDNY MQRGDDFKKRVLEKEV >gi|325480808|gb|AEXN01000023.1| GENE 64 66378 - 67328 929 316 aa, chain - ## HITS:1 COG:HI1135 KEGG:ns NR:ns ## COG: HI1135 COG0472 # Protein_GI_number: 16273061 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Haemophilus influenzae # 6 315 28 357 360 217 42.0 2e-56 MKNTILIILISLILTLILGKIIIPILKSSHIGQNIRQEGPKSHYDKAGTPTMGGIIFLIS ALVLTLIFVPFSMKTFILLLATFGFGAIGFIDDFRKLVLKRSLGLTAMQKIILQVGLSFA IAILCFIFQNDTITKLWIPFTDIRLNVSILGIPIMMFIMIGTSNAVNLTDGLDGLSTQVS IPVFITFIILAKNIEDELFASIMLGAVLGFLFFNSNPASVFMGDTGSMAIGGAVVALAIN MGMTLFLVILGGVYVAEALSVIIQVASYKLRNKKRIFLMTPIHHHYELKGYKEPKIVTGF TIVSVILSLITLLAVL >gi|325480808|gb|AEXN01000023.1| GENE 65 67334 - 67732 363 132 aa, chain - ## HITS:1 COG:no KEGG:Apre_1206 NR:ns ## KEGG: Apre_1206 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 37 132 35 130 131 70 47.0 2e-11 MSAALKKRKVNKNLNKRKKLSLHNQTSYDTKFSYNRLKKKDKKFKRNVLALLILSFIFMG IFSLHNYMKLNNMRNEYNNLQSQYTSYQLTRDRLNKDLEDSVDLKEIQRYAMENLGMIYE NKDNTVYLNIDR >gi|325480808|gb|AEXN01000023.1| GENE 66 67734 - 68654 1062 306 aa, chain - ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 306 1 310 312 331 54.0 1e-90 MEFSHKSVLLNETIKNLNIKEDGIYADLTLGKGGHSKEILKNLSPEGLLVGLDQDKDAIK AAKENLKDFSNVLYFNENFEKISDVLDKASLKMIDGALMDIGVSSYQIDNGDRGFSYMKD GPLDMRMNKDNELTAKQIVNDYSLDELWEIFSKYGEERYSKTIAKAIVDYRKLHEINTTL QLRNIVMKSVVTNEAHPEKRVFQALRIEVNRELEVLENTLEKIVDRLNKGGRLCVITFHS LEDRIVKNKFKEMSKKCICPPEFPVCVCNHEKKVKIISKKPILPSKDELKTNRRSHSAKL RVCERV >gi|325480808|gb|AEXN01000023.1| GENE 67 68656 - 69069 327 137 aa, chain - ## HITS:1 COG:CAC2133 KEGG:ns NR:ns ## COG: CAC2133 COG2001 # Protein_GI_number: 15895402 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 123 1 123 142 115 47.0 3e-26 MFLGEFIHKLDSKNRIMMPSEFRDDLGSEFYVTKGPERSLVLYTIDEFEKRAKKFEELSY QNKNNRAMKRLFFSSTIKAYLDKQGRVLLNKQLREYANLNKEAIIIGNNTNIEIWDLDNW NDYIGDVEVNLSEIMDQ >gi|325480808|gb|AEXN01000023.1| GENE 68 69258 - 70019 771 253 aa, chain - ## HITS:1 COG:CAC0330 KEGG:ns NR:ns ## COG: CAC0330 COG0682 # Protein_GI_number: 15893622 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Clostridium acetobutylicum # 6 246 17 271 272 193 41.0 2e-49 MLNFNIDRVAFSLFGIDIYWYAILIISGVLIGAKIAQKEFVKRGFSEDFIYDLLFVTLPF AIIGARAWYVIFEWDFYKNDPIQILNFRAGGLAIHGGILFAIIAIYFYTKKKNLPLIDIL DVMVPSLALGQAIGRWGNFVNGEAHGSATNLPWAIIVDGVKVHPTFLYESLGDFLIFLFL LIYRKKNPKKGIQTSIYFMAYGVLRFFVEGLRTDSLMIGPFRMAQITSVVYLIVGIFLFV KYKNINLKPYKKN >gi|325480808|gb|AEXN01000023.1| GENE 69 70021 - 70758 1075 245 aa, chain - ## HITS:1 COG:TP0474 KEGG:ns NR:ns ## COG: TP0474 COG0217 # Protein_GI_number: 15639465 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Treponema pallidum # 1 243 1 243 245 234 46.0 1e-61 MSGHNKWSKIKNKKGSEDARRGKIFTKLGRNISVAVREGGDNPEYNPALKAAIDKAKAEN MPNDNIERAIKKASGDMDGANFERIIYEGYAKDGVAVIVDCLTDNKNRTAPDIRHIFDKN GGNLGTDGSVMFMFNRKGLIEIEKDGIDFDELMLEVIDLGAEDVTDEGDTYQIITSVEDF QSVVDGIKKSDYKLTKADISYIADNLIDAQESNNKQIMKLIDALEDNDDVQEVYTNWNVP DSIED >gi|325480808|gb|AEXN01000023.1| GENE 70 70770 - 71417 659 215 aa, chain - ## HITS:1 COG:lin2660 KEGG:ns NR:ns ## COG: lin2660 COG1739 # Protein_GI_number: 16801721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 11 206 4 200 211 158 43.0 8e-39 MRDISRKISQNYKTIEGEIKDEFEIEKSVFITNIKYVENEKDAIAFIEKIKENYKDANHN CSAYIINEKPEIKRYSDDGEPQGSAGIPMLSVLEKEELFNLVAVVTRYFGGKKLGKGGLV RAYTKGVSDCLDGKITYRKVFIESKITFDYNLLGIIENFLNEENYIIIEKNFLQNVSIDL YIEESNFENFKKRLIDMTSSNIEIEEIDKIMLYDK >gi|325480808|gb|AEXN01000023.1| GENE 71 71380 - 72627 1289 415 aa, chain - ## HITS:1 COG:CAC2299 KEGG:ns NR:ns ## COG: CAC2299 COG2262 # Protein_GI_number: 15895566 # Func_class: R General function prediction only # Function: GTPases # Organism: Clostridium acetobutylicum # 21 408 194 592 593 247 40.0 4e-65 MQEVIQVNVFENKENPNKDFELESLINTAGGKSVAKISQVVSKVNPAYYIGSGKVSEIED IAKKLNVNTVVFDVELSASQLRNLEERMKLHVVDWTTLILDIFAQRANTKEAKLKIKLAQ LKYQLPRINKWFAYLSRQSGGIGTRGPGETMLETDKRAIVRDIRSLEEKLKDLEKTKVVN RKSREKILNISLLGYTNAGKSTILNNMLKIFGKDKFVYSDDLLFATLDTSTRRLDFSNTK VTLTDTVGFIDNLSKELNDSFLTTLEEIKFSDMLLVVIDSSYDIQTQLDTIDKALDDIDI GEKKILYVFNKIDKIEDQMILLGYKNKEEKIYISARDEADIIRLKDKIVDVIKNDYVRVM MKIPYEDGKVLDYIMTNYDIDKKDYDENSSILEFDISKKDYNKYERYIEKNQSEL >gi|325480808|gb|AEXN01000023.1| GENE 72 72803 - 74953 2572 716 aa, chain + ## HITS:1 COG:NMA0655 KEGG:ns NR:ns ## COG: NMA0655 COG5009 # Protein_GI_number: 15793640 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase/penicillin-binding protein # Organism: Neisseria meningitidis Z2491 # 1 705 1 599 798 233 28.0 1e-60 MNKKISSIVLKILLIALLAFGIIGTIFAGLIGGGIVEVMKKSPKVNPENIKYEMSENSTI VDKNGKEIDSIRTSENREIVDIEKVPDYLKNAFVAAEDRRFYKHSGIDPLSIVGSALQNL KSGSIVRGGSTLTQQLARNTYLSNDQTYERKIKEIFLALDIEKSLSKDEILEAYMNRVFL GQNVFGVQAAAQTYFSKDVSELSLAECATIAGIVQSPTEFALFKTIPTSEVTNEKVLGEF TIDGQKYSAIYNPKPYEREKYVLEKMNEEGYISDKEYKDALNEDVASSINPPEDREPVMA SYFNTLLEKQVVEKLQDIYKIDEKEAYNKLYYGGLKITTTIDSKIQEQVENIYENFSEYI LGNTQGRNTAPLLNLSYDGYGNIINENGNVIYFAKSNIINDNNDFTLSNNEAYFDDYNNF VINSSKLKLNQTNLILKNFYTLDEKDSNLRTHKTGYMELNSNENVKEGNDGSIIITSSYL KKHKDLIIQNDSGSYSFNKSYYDIDLEGVIQPQSATIVIDHKNGEIKAVVGGRDQKGLKI LNRAIDQPRQPASTMKPLATYTPAIDKGYSLATGIDDVPFMRKENGEIWPENIYKSYKGI VSLRDSIVYSINTNAVRTLKDVGIANSKKYLEKFGLIKENGDDNFITKDENPKNNDENLA SMGLGAMTNGMTLIDMTAAYAALANKGEYIEPLAFSKIEDNQGKIIFSEKNKKEIR >gi|325480808|gb|AEXN01000023.1| GENE 73 75124 - 75732 723 202 aa, chain + ## HITS:1 COG:no KEGG:Apre_1213 NR:ns ## KEGG: Apre_1213 # Name: not_defined # Def: glycosyl transferase family 51 # Organism: A.prevotii # Pathway: Peptidoglycan biosynthesis [PATH:apr00550]; Metabolic pathways [PATH:apr01100] # 1 202 775 981 985 162 49.0 7e-39 MGADDQNIYQDDYSTTRAQVIWKNINNQILEGYETKKFKEPKGIIHAKVDTISGKLPTQA SYSDPRNTVKDEIFTKDNLPKKEDDVHVWITVDTRNNLLASNTTPKSLQANRSFIDRKNS YDPSKWDGIVPEDWKYSIPTRYSTLGAELPKADNNSNKEKEKDENKDKEDTKTNTNLNGN EQNTNPQNQINPQNQQGIRNNN >gi|325480808|gb|AEXN01000023.1| GENE 74 75757 - 76263 381 168 aa, chain - ## HITS:1 COG:BH1014 KEGG:ns NR:ns ## COG: BH1014 COG0563 # Protein_GI_number: 15613577 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Bacillus halodurans # 1 167 1 167 178 97 33.0 1e-20 MEKITIIGSGGSGKSTLAKQLGEKLGIKVFYLNKIWWLNDKEHISDEEFLKIQKDIIDNN QSFIFDGYYPDTLDLRLEASDTIIFLDFPPVTNLKRSVKRSLTEKNNEDDPSLDRTEKLN KEYISWLLNFNKNEREKIIEKLNKLKLEKRIVIIDNDNKKDLFLQSIA >gi|325480808|gb|AEXN01000023.1| GENE 75 76314 - 77180 896 288 aa, chain - ## HITS:1 COG:BS_thyA KEGG:ns NR:ns ## COG: BS_thyA COG0207 # Protein_GI_number: 16078831 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Bacillus subtilis # 1 286 1 279 279 213 43.0 4e-55 MNKTDKKYIEIAKNILENGYDEEKLNHEVRAVWEDGESAYTKFLPQEIVRYEKGEVPLIS LRKIAWKSAIKEILWIYQDRSNDVNLLKEKYKVNYWDSWKNDEGNLGTAYGYQINKKFKS PETGNMTNQIERLIDQIKNNPLNRRLIMNLIDVDDMADMTLIPCAFLTMWTVSGDYLNLT LIQRSGDFLAAAAPGGINAFQYYVLLRMIAQVTGYKAGDFVHFIQNYHIYKKHIPIVKKI MEVKVDEKSRPRLEINPDIKDFKDFTIDDFKLLDYYPDKTKYDIDIAL >gi|325480808|gb|AEXN01000023.1| GENE 76 77249 - 77497 453 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212697067|ref|ZP_03305195.1| ## NR: gi|212697067|ref|ZP_03305195.1| hypothetical protein ANHYDRO_01632 [Anaerococcus hydrogenalis DSM 7454] transglycosylase associated protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_01632 [Anaerococcus hydrogenalis DSM 7454] transglycosylase associated protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 82 1 82 82 89 100.0 6e-17 MISSIVIGALCGWIASMIMKTDAQMGAIANIVVGIVGGAVGSWVLNLLNISVSSGFIGSL ISGILGSVILIYVYNLITKKNK >gi|325480808|gb|AEXN01000023.1| GENE 77 77656 - 78369 737 237 aa, chain + ## HITS:1 COG:BH0820 KEGG:ns NR:ns ## COG: BH0820 COG0745 # Protein_GI_number: 15613383 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 5 229 5 231 234 183 45.0 3e-46 MNKIKILLIEDEKGISKIMKSYLEKEDYEVFQAFDGKEGLEIFESEDIDLVLLDLMIPKI SGEDLIKEIRNKSNVPVIMVTAKVSEDDIVNGLKLGADDYVTKPFSPKELMQRIKTVLRR IEKYNIPRADIIKTTDGRLEMDLEYNRFFKDGEEIFLTKNEFQIIKTLFSNPNKIFTREE IIEITFGFDYDAYDRAIDTHIKNIRQKIEDNPKKPSYIKTIYGMGYKSGGIDDNSTK >gi|325480808|gb|AEXN01000023.1| GENE 78 78350 - 79666 1400 438 aa, chain + ## HITS:1 COG:CAC1553 KEGG:ns NR:ns ## COG: CAC1553 COG0642 # Protein_GI_number: 15894831 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 136 438 145 452 457 146 34.0 9e-35 MTTLRNKIIRNLLAGIFACILVFSLAISYLINVYTRNFINTTQDNRPRQIKKQFEDLLTD KDPYLMKERLGKVSKTLNVDISILNKNNEPVMSFKGRDKDASELTESKSYDIINPNLNDY MGQLIITYGTDEFEANELITNIKTSIFIAIFLSIFIGLIIALYLSTKITNPIKQISDATL KIKDGDYDIDLKDSKIIELENLQNNIKYLSINLKNQKYVRKQYAQDISHELRTPITNLQL YIEAIKDGVIDVDDETLNSLLEEIHRLEGLVVNLNKSFNDNSEYLKINKKEFDLSNHIKL ILNTIKPRLNKLDISLIEEIKDGIMIYSDKDKISQITQNLISNAIKAIKDDGLIRVSLSE DKNNIYLVVKDNGVGISDEKKEVIFERFYRIDDARNTKINGHGLGLSITKNFVESLGGKI KLKSKLGKGSTFSVIFPK >gi|325480808|gb|AEXN01000023.1| GENE 79 79712 - 81109 1257 465 aa, chain + ## HITS:1 COG:no KEGG:Apre_1217 NR:ns ## KEGG: Apre_1217 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 72 465 63 453 453 223 42.0 1e-56 MKSKKNRLNNKNRSGSRHKNTKVRKKDIKIRSKDSNIRKRSKKRRKNQRLIYMRRRIILL LLLIFIIIFLVSAISKRLNRYKSDSYPKFRDQVMDSLTKDIFVTNTENRSLTSAEKISDF NKLNDYIIRNYAIDNNNEENYKNLIDQTDIYKKRVKNSKSDQEFYDIISSYLSILKDNRT KILDKKTYQLTFPYYKEKNKSPRAKNLGDAQVVNRYKRLLGRKLENTGLEIKENKNTLEI YWPDFDTNTLNKDKEKLKEVLQKNQNIQNIFIDLSNNDSIDDKYANEILPLLIHEDYTLE KVVFYRGNLLKQSLSYMKNNKDRLNTRSSFMQNQSIKFPEETKEINKDYYMYYDQIRIDI KKDKDIGNKKIYILTNDNTKNDPIRFASILKANADAYIVKNGFEGDQNQNEIIYNLRSDI FKLDHSGFLISINSSKSLNEDDKFIKYNQTINSSDPHKEVLNMIK >gi|325480808|gb|AEXN01000023.1| GENE 80 81146 - 82219 1421 357 aa, chain - ## HITS:1 COG:no KEGG:Apre_1218 NR:ns ## KEGG: Apre_1218 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 7 351 3 351 360 253 46.0 1e-65 MTEKYNEKNSRKNSSEIREKRRERYKDDFSRDNTISWGSIIAGAVSFAAVFTVLSLIVAA LGLGIFSPNNENPISSMGIGVGISTVIILIISFGISGFISGAFSKGQSLLHGFMSWALSI ILLFGLVISMVSSALGLVGSATKAVANTAGDAVGTVASTTADGAGNVLSSVADSISGVDT KELEKNINDTLSETDVKELQPEYLKSQLDDSKDEVLEAGKKLLTNPEDSDKIFDDLSKSL EKKAKDITDSVDKKTIKDEVYKNSSLSAEESDKAVDNIYDGMDKASKEASKQIENAKNSL EDAKKDAKKMVKDAKDGAESATNKASAGAVLVFLFLLVGLAIEIYCARIGERYVNSL >gi|325480808|gb|AEXN01000023.1| GENE 81 82356 - 82772 509 138 aa, chain - ## HITS:1 COG:no KEGG:Apre_1219 NR:ns ## KEGG: Apre_1219 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 133 174 304 307 124 52.0 2e-27 MLNEDLTNQKLIAKALKNTKYWVEPYQEGFERSNKFDLFAKKDKKKYAIEIRNYKSKKDI DKGFARELAHNFKNLKDERVRPVLVINTSFLKEESKNELIAYDVLILDVKNIKKMLKGRD MIREIEQAQTLYKYKNKI >gi|325480808|gb|AEXN01000023.1| GENE 82 82762 - 83289 601 175 aa, chain - ## HITS:1 COG:no KEGG:Apre_1219 NR:ns ## KEGG: Apre_1219 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 172 1 172 307 162 52.0 8e-39 MELTEKFEKDQCKNPVEYSIIHKEIPIKMPGDMWEAISYLLWYVPDISSIQSKSNELISN MEYDYYTFIEIMTYMDLKDEDCLFTDKIDEKLADEYKKKICTNSQKLILTQSDGETKTES LLRHIRNAIAHGSFNIVEDLMVGFDEKIVGKDLSKTTAIFKIKPKNLLNALKNAK >gi|325480808|gb|AEXN01000023.1| GENE 83 83449 - 83616 267 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212697060|ref|ZP_03305188.1| ## NR: gi|212697060|ref|ZP_03305188.1| hypothetical protein ANHYDRO_01625 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01625 [Anaerococcus hydrogenalis DSM 7454] # 1 43 1 43 196 87 100.0 2e-16 MKLAIIYYSQTGHNFQMAKWAKEEAEKNGAEVRLLKVKEYLDEVEPITILLGKNI >gi|325480808|gb|AEXN01000023.1| GENE 84 83790 - 84038 469 82 aa, chain + ## HITS:1 COG:DRA0214 KEGG:ns NR:ns ## COG: DRA0214 COG0655 # Protein_GI_number: 15807878 # Func_class: R General function prediction only # Function: Multimeric flavodoxin WrbA # Organism: Deinococcus radiodurans # 1 81 119 199 200 86 50.0 9e-18 MTSAQNNNGGQEGTIKTIYTSAAHWGAIIVPVGYIDDAIYAQGGNPYGASATATNEGFAN EIENAVKAQAKRVVEVTKKLVD >gi|325480808|gb|AEXN01000023.1| GENE 85 84064 - 84201 205 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKIFKAIKNRWEKFLKNLAEENKKSFGDQKLDCCTMNKKEYKIKK >gi|325480808|gb|AEXN01000023.1| GENE 86 84276 - 84767 746 163 aa, chain - ## HITS:1 COG:MA1614 KEGG:ns NR:ns ## COG: MA1614 COG2110 # Protein_GI_number: 20090472 # Func_class: R General function prediction only # Function: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 # Organism: Methanosarcina acetivorans str.C2A # 3 156 29 182 195 120 43.0 2e-27 MTLQVVDIDILKLKVDAVVNAANVDLIEGGGICGQIFERAGRDKLKEACQKLSPIKPGQA VITDGFDLYQKYIIHAVGPIYNEIYKEACQKILEDAYKNALELAKKNKINSIAFPLISAG IYGYPDREAFMIAKNTIDEFLKENKMDIYLSTYGKDMLSLIMG >gi|325480808|gb|AEXN01000023.1| GENE 87 84939 - 85211 434 90 aa, chain + ## HITS:1 COG:no KEGG:Apre_0024 NR:ns ## KEGG: Apre_0024 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 88 2 87 87 107 72.0 1e-22 MKNKFSKITNFIPVYFRAMKDKNTPKLAKLLGLGAILYAIMPADLINDMIPFLGILDDAI VLPFLIYITSKMIPDSVMNKEKFEYIEENK >gi|325480808|gb|AEXN01000023.1| GENE 88 85235 - 86866 1101 543 aa, chain - ## HITS:1 COG:no KEGG:Apre_0167 NR:ns ## KEGG: Apre_0167 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 542 1 542 543 271 36.0 7e-71 MSRYFSKFLLIERIKITKVFNGMVYGIRKIPLIGKGLGDKYYFYDLKEIFNTFIPIFSII WQMIKSILTFGFAIFISRTLLKLLFEISDKSPLFFRENFDLSPGAVLLTCIPFSFYISNM ITSSLLTDNGNAFSDLSKNFNFFPNDLAHIFLYLEPFLIFIGRTLGFVIFGKIFANINPI YTFLFSLGIYFYNINITGFWTKIYEKREKPFFEDRPFLQIILILNLDLAISLLVLIIKLD FKVLSLGYFFINLILFPFVVKYFKNFKGYDKIIEKTIRVYKLAVEDSKDVQNNVVKIKNK DINKNEKIKGEGFVYLNNLFFKRHKRHLLKPTLIKTGIFFALGIGGFFLLSSLTIKSDEV YKILIYAIPIISYILFKQDLILMAFYKNCDSSLLYYNFYREDKNLLKMFWLRFNSVFKLM SIPMGAMFIIYIGFAIKFLTKTDLNLSLPIFYIVLNAIFFTILPLFQYYIIQPFDKEGKQ KSLVLVLMNMFLYYIFIFGLPALATKIGEIKFMLIISIFIIAFVGLASFLIYKFAPKTFK IKQ >gi|325480808|gb|AEXN01000023.1| GENE 89 86859 - 87614 193 251 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 3 204 9 214 309 79 27 8e-14 MKLEIKNLSKKFGKKEVLKNIDYTFDQGVVYALLGRNGAGKTTLFSLISEQIKKDSGNIY LIDENEKKELDFRDVFFMVAEPDLPKFLTGREFIKFFLEANKENIKNEKSIEEYFSLVDF DMEDADRLIQDYSTGMKNKLQMLMFLILRPKVILMDEPLTSLDVVVQLEMKKIIRDIHKD HIIIFSTHILQLAKDICDDIVLLHDKNLQKVDKMVSEDKDFEDKIIKLLTSKNVENIDIN LDDENLGDKDE Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:46:27 2011 Seq name: gi|325480794|gb|AEXN01000024.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00012, whole genome shotgun sequence Length of sequence - 11639 bp Number of predicted genes - 14, with homology - 14 Number of transcription units - 3, operones - 3 average op.length - 4.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 2 - 61 9.2 1 1 Op 1 32/0.000 + CDS 107 - 547 548 ## COG0779 Uncharacterized protein conserved in bacteria 2 1 Op 2 22/0.000 + CDS 556 - 1788 731 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 3 1 Op 3 15/0.000 + CDS 1810 - 2067 182 ## PROTEIN SUPPORTED gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein 4 1 Op 4 32/0.000 + CDS 2081 - 4222 3150 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 5 1 Op 5 4/0.000 + CDS 4225 - 4608 602 ## COG0858 Ribosome-binding factor A 6 1 Op 6 1/1.000 + CDS 4586 - 5566 285 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 7 1 Op 7 . + CDS 5559 - 6443 1017 ## COG0130 Pseudouridine synthase 8 1 Op 8 . + CDS 6433 - 6582 217 ## gi|212696543|ref|ZP_03304671.1| hypothetical protein ANHYDRO_01081 9 1 Op 9 . + CDS 6591 - 7376 371 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 + Term 7385 - 7442 7.5 - Term 7373 - 7430 14.2 10 2 Op 1 40/0.000 - CDS 7447 - 8685 993 ## COG0642 Signal transduction histidine kinase 11 2 Op 2 . - CDS 8745 - 9440 701 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 9476 - 9535 4.9 + Prom 9340 - 9399 7.3 12 3 Op 1 . + CDS 9565 - 10458 287 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 13 3 Op 2 . + CDS 10459 - 11211 541 ## FMG_1407 hypothetical protein 14 3 Op 3 . + CDS 11264 - 11639 182 ## FMG_1406 hypothetical protein Predicted protein(s) >gi|325480794|gb|AEXN01000024.1| GENE 1 107 - 547 548 146 aa, chain + ## HITS:1 COG:lin1358 KEGG:ns NR:ns ## COG: lin1358 COG0779 # Protein_GI_number: 16800426 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 4 92 1 93 155 76 48.0 2e-14 MDLISKLKENLESDINNLGYELVDIEFVTEGKNKILRFFIYKDGGITIDDCEKTSNLLSE RLDEIDLIKSFYYLEVSSPDLSRPLKTDRDLERNKDELLEVKLKNGEKFLANIEEIKEDS LVFKCEDGQKEVDKNEIKTIKIEIVF >gi|325480794|gb|AEXN01000024.1| GENE 2 556 - 1788 731 410 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 4 353 9 358 537 286 41 6e-77 MNKEFIIALEELEKSKNVDKKIILEALEKALVKSYQKNYENNENVDVNIDEETGEIEVYS LKNVVDEVNDPIAEISKTKAREIDSKLDLGDICRVKIAPKNFGRVAAQTARNIVLQKIRD AQRDSVYSEYLDRANEIITGVVQREDKYNVYINLDKIEGIIPLKEQVENEKYIANQRIKV LIKDVKNTTKEPQIILSRKDKDLVVRLFELEVPEITNGIIEIYGIDREAGSRTKIAVFSN DPEIDSIGACIGFKGSRVNSIVEELQGEKIDIINYDKDIKTFIKNSLSPAEINEVYINDM KKQSLVVVREDQLSLAIGKEGQNARLAARLTGWKIDIKSQEEFDKLDQDEIDEILGLNEE EDEIIENIDGEIENSLDQVEDETDFIEDDIENLSEDLDQIIKEDIEKSEE >gi|325480794|gb|AEXN01000024.1| GENE 3 1810 - 2067 182 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|206900953|ref|YP_002250931.1| ribosomal protein L7Ae family protein [Dictyoglomus thermophilum H-6-12] # 2 81 3 82 98 74 43 3e-13 MKQRKIPQRKCIVCGENKDKNDLIRIVKNKEEGIILDPTGKKNGRGAYICKDEKCINEAK KKRKLEKVFKTEISDDLYEEIIAMK >gi|325480794|gb|AEXN01000024.1| GENE 4 2081 - 4222 3150 713 aa, chain + ## HITS:1 COG:BH2413 KEGG:ns NR:ns ## COG: BH2413 COG0532 # Protein_GI_number: 15614976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Bacillus halodurans # 4 712 3 729 730 612 50.0 1e-174 MANKLRIYELAKNYNKTTKEMLKLLKEEFGLEIKSHMSVLGGDDLAIVEEYFSDNKKEDK NINQQKEKKDDKKIENKCKKEEKIPENKSSNKKKNKKSSNKKDKKKNKKQNKRSKKSTKR EIKADNNDDGNIYIPESISVKSFAEKIDENANQVIMKLMGLGVMAGLNDQIDFDKAELVA LEFNKEISKEVKLDEVEIQEKDLDYEDDEKDLQSRPPVVSVMGHVDHGKTSILDAIRNTQ FASGEAGGITQHIGASTVNVNDKEIVFLDTPGHEAFTQMRMRGAQSTDIAILVVAGDDGV MPQTIEAINHAKAAGIPIIVAINKMDKEESDPNRVKQELTEYGLVSEDWGGDTIMVEVSA RTGDGIKELLEMVLLVAEMRELKANPNRDAVGIIIEAQLDKARGAVATVLVQKGTLHDKD YVVTGSSSGRIRAMFNSKGQAISEAGPSTPVQILGLSDVAEAGDKIFAVEDEKIARAYAD RAKEQKREERLIQKSNTNLEDMYEGIEEGELKELNIIVKTDVKGTVDAVASSFSKLSNEE VFVNVIAGAVGGISESDVLLAQASNAIIIGFNVRPTQGALQMAEENNIEIRTYSIIYEAI EDVEKALKGMLDPEFEEKILGRAKVQETFKIPSAGTIAGVLVTNGSIPRSAKIRLLRDNV VIFDGEIESMKRFKDDAKVLNNGYEGGIGLEKFNDIKEGDELEAYEMVEKERA >gi|325480794|gb|AEXN01000024.1| GENE 5 4225 - 4608 602 127 aa, chain + ## HITS:1 COG:SA1113 KEGG:ns NR:ns ## COG: SA1113 COG0858 # Protein_GI_number: 15926853 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Staphylococcus aureus N315 # 1 118 1 115 116 89 43.0 1e-18 MDKRRTLKISSQMQKELSKILAEDINDPRLSDNVIVSITDVEVTNDLSYADIFVSVLGDD SKKESVIEALEQAKGYMKKLIGERMRLRSMPEFRFKYDNSIEHGVYMDKLIAETIKKDEK NAKNRED >gi|325480794|gb|AEXN01000024.1| GENE 6 4586 - 5566 285 326 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 6 321 2 310 311 114 27 3e-25 MPKIEKISQKDLEKFKNFIDQAQSIAISAHINPDGDALGSSLSLRKSLELYGKKAEVIKI SEVDDYLKFLPQLENYKEPSQEEYDLFIIVDCSEFDRIDKAIEICKNSKKVLVIDHHEGG SIKTDLNIIHSDSPASCELVYEIINRLNLPIDEEIATLLYAGLVTDTGRFLYSNISELTF YTAADLYKKGANFEMIYKNLYQNKEISKLQFENYILNKVEFNKPYALVGVSQKMCQEYNM QMGDSESVVNMLRDLKGIEVACLVKEYGENEFKISLRSKEYLDVSEIARNNGGGGHIRAA GFTLNENTMDRAICKMRDILKEALND >gi|325480794|gb|AEXN01000024.1| GENE 7 5559 - 6443 1017 294 aa, chain + ## HITS:1 COG:PA4742 KEGG:ns NR:ns ## COG: PA4742 COG0130 # Protein_GI_number: 15599936 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Pseudomonas aeruginosa # 3 283 12 295 304 198 40.0 1e-50 MTSGILLIDKNTGASSGKIVYQARKKLGIKKIGHAGTLDPLATGLLPLLINKATRVSDFL MDEVKIYETLAFFGQKTDSQDITGEILERSSKTFELDDLKKAIDENFVGEILQTPPMYSA LKHKGKKLYELAREGKSVERKKRKIKIYDFEIIDFNFPYARLRISCSKGTYIRTLVNDLG EILQTFATVKELRRIKVGDFDVKDAIKMEDFEKMQADQIIKNLIPIDKALCQYEKIVLDK SYYKQATNGMTMKVDYGKNVDNYLRVYVGDLFIGLGEYKDENKTLKIKKVFYER >gi|325480794|gb|AEXN01000024.1| GENE 8 6433 - 6582 217 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696543|ref|ZP_03304671.1| ## NR: gi|212696543|ref|ZP_03304671.1| hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01081 [Anaerococcus hydrogenalis DSM 7454] # 1 48 1 48 143 87 100.0 3e-16 MKDNIKIFDLDFNEFDLSPKAVSLGNFDGVHRGHQKLMKENIEISKEKI >gi|325480794|gb|AEXN01000024.1| GENE 9 6591 - 7376 371 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 1 246 52 304 317 147 33 5e-40 VLLFKENTKNILNGEKEYLTSLEDKIEILKNIGIECFCLLEFSDEFKNLSPYEFIEEILY KKLNTKYVIVGDNYRFGKMAKGDIKTLKKYEEDFAYKTKVVDFELDDGKIINSTDIRQMV RDGEIEKANKDLGHPFKMQGKVIKGAQRGRLLNFPTANLKPSFKYTTAKSGVYFTKVNID RDFYYALTDIGTNPTFENKEIKIETYILNFSKNIYGKNISIEFLEYLRSDYKFNSADELI EQMEKDKETGRKLMEKYNNKA >gi|325480794|gb|AEXN01000024.1| GENE 10 7447 - 8685 993 412 aa, chain - ## HITS:1 COG:CAC0290 KEGG:ns NR:ns ## COG: CAC0290 COG0642 # Protein_GI_number: 15893582 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 1 412 21 467 467 87 23.0 5e-17 MFFLIFLFMTFLYLNYRLNNKYENPNDLYTYVKANKGKTYLNEKNKKYLEEKNIWSIRLD KDGKIIESFNKPKEIKNKFNITDVAKFTRFYLADYPVFTYIAGDGLILFAYPKDSLDKFP FNYYNYKDFIFNLQLFALFVLLFFVFVYIFYRIDIKNIFKNILPFQKAIDSLYENDYEGL DEYGELKDLAISINRANEKYNNLKKSQEKWIRGLSHDVRTPLAKISWEISKDNRENINLK NIQDQVLKISNILEGLNLTLSLSNIDRENFSKESPIKIIRKLIVDKLNENPKKEIIFDNR MKNQDIKIKMDPILFYRMLENILKNSLTYTNGKIMLIISDSNHMINITILDEGSGLDENI IEKIYKEDLTNIRRHGLGILISKQIAQLHEGKFIIKNKKPGLEISFIFAYHD >gi|325480794|gb|AEXN01000024.1| GENE 11 8745 - 9440 701 231 aa, chain - ## HITS:1 COG:CAC0289 KEGG:ns NR:ns ## COG: CAC0289 COG0745 # Protein_GI_number: 15893581 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 6 227 6 233 235 152 40.0 5e-37 MDYKRDFNILIVDDEKILLENLYDFLKNKGFKKVYTAKNLKESRFKLENFKIDLLVLDLM LPDGSGFDLLKELRKSSDIPVIILSALDGIDDRKEGFKNKADDYLVKPFFPDELLWRIDA VLRRSKKIKGNQKINLGGVIFDKDKGILIKNGKEISLTATQFKILSYLCENINMIVSIDR ILDHIWENSYGYENTLITHIYRLREKLEDNPRDPKILITIKGLGYKLVDKG >gi|325480794|gb|AEXN01000024.1| GENE 12 9565 - 10458 287 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 292 1 298 305 115 31 2e-25 MEKILEIKNLKKSYNNKRVLDIDYLEIKEKSIYGLIGKNGAGKSTLMKIVLGLVKKDEGM VKVFNQEVNGKNQKKLNKNLGALIENPSFYDHLTGYENLEIISSLKGVDKKEISKTLDLV GLKNVEKKKAREYSLGMKQRLGIAIALIGSPKLLILDEPINGLDPQGIEEMRNLFKNIVK NTPTSILISSHILDEIEKISTHIGILKEGKLTYNGSLEEYRRLHPPFISMITSDNKKALE LIDLNEDNLKGKKIILGKKSNQEIGQIVNFLHGKVDIYRIEEEKESLEKLFIEESRS >gi|325480794|gb|AEXN01000024.1| GENE 13 10459 - 11211 541 250 aa, chain + ## HITS:1 COG:no KEGG:FMG_1407 NR:ns ## KEGG: FMG_1407 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 250 1 250 250 294 74.0 3e-78 MRNLERKKYKKLGINFLIVMVFIGQIFIVAGLSHSNTFLRAKYPLFYILDTYLFISLLIN PILISSLVKKVIEIEEKNKMWQLQISLGENVNSILLEKFKNLSLKLFLLQIIEAFIFIKL GISSDKFIMNNDVILRFVLVNLSSFIINLFFLGFFMIIEMKTKKVYTLSFFSLVGGLTGV ITMLTSEILSFINPFAWMASLLNISYVKEGDKFVQVLNPTNFYTLIIALVFLILSLIYLK TMKSYNLYKD >gi|325480794|gb|AEXN01000024.1| GENE 14 11264 - 11639 182 125 aa, chain + ## HITS:1 COG:no KEGG:FMG_1406 NR:ns ## KEGG: FMG_1406 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 125 16 140 234 166 81.0 3e-40 MVSLIIPLLANIFGLINYMGNRGTLSHQWQSLWTQVSLFYFSFFYIPLIAIVIGSLWATE HKAGLKFIRLSPMKNMSFVIGKLILAFIIISLCQLYFLALFYLGGKFIGNFSSINFDIYF YYISL Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:46:42 2011 Seq name: gi|325480783|gb|AEXN01000025.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00073, whole genome shotgun sequence Length of sequence - 6919 bp Number of predicted genes - 10, with homology - 10 Number of transcription units - 4, operones - 1 average op.length - 7.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 293 457 ## MGAS10750_Spy1685 hypothetical protein - Prom 317 - 376 8.2 - Term 427 - 467 2.1 2 2 Tu 1 . - CDS 480 - 1424 833 ## Apre_1219 hypothetical protein - Prom 1470 - 1529 6.3 3 3 Op 1 . - CDS 1536 - 1811 399 ## Apre_1806 hypothetical protein 4 3 Op 2 . - CDS 1830 - 3353 1485 ## COG3505 Type IV secretory pathway, VirD4 components 5 3 Op 3 . - CDS 3319 - 3624 305 ## Apre_1805 TraG family protein 6 3 Op 4 . - CDS 3617 - 4351 855 ## COG3645 Uncharacterized phage-encoded protein 7 3 Op 5 . - CDS 4348 - 4833 672 ## MGAS10750_Spy1681 hypothetical protein 8 3 Op 6 . - CDS 4826 - 5653 647 ## COG1484 DNA replication protein 9 3 Op 7 . - CDS 5650 - 6423 699 ## SPAP_0865 hypothetical protein - Prom 6454 - 6513 6.0 - Term 6438 - 6479 4.0 10 4 Tu 1 . - CDS 6531 - 6917 313 ## gi|325847956|ref|ZP_08170110.1| conserved domain protein Predicted protein(s) >gi|325480783|gb|AEXN01000025.1| GENE 1 2 - 293 457 97 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1685 NR:ns ## KEGG: MGAS10750_Spy1685 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 91 1 91 103 132 94.0 4e-30 MDREMININANLVKEADFSEFEKDGENVQVANFALVKKYGNGKEYTNCSVYGEKVEIVKE FEKGDLIHVFGYFKENKKEDKVYKNFIVKSLNKIENK >gi|325480783|gb|AEXN01000025.1| GENE 2 480 - 1424 833 314 aa, chain - ## HITS:1 COG:no KEGG:Apre_1219 NR:ns ## KEGG: Apre_1219 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 228 11 224 307 91 29.0 4e-17 MRCCKSPKKVSISIKHEPVPMKDIQELFLSLSFLLWYSPEVKTSRQSLSNPIIFNKTYED IVMEFIQNGLKMDSDDIFFYDQSKLPIDIISEYIDSYEGGNPKFKDICVNCQKIYIADTK NLSKPVKFLSHMRNILAHGNFNIVNGLIIGYDKNPRDNKINTIIKLYPTELYKSLNYIDP SNHFGITLEKVLQAGFEKLGYEVIAGDSNYRYDFILSKDSFYYFIDLKYVSKIANIKRMI RLEEARPSSTDKYKVIKLIELKGEDVFPNMAKSKMKIEEINNKIYIYPGILAELYKGVDI IEKYGLMKYGNTLR >gi|325480783|gb|AEXN01000025.1| GENE 3 1536 - 1811 399 91 aa, chain - ## HITS:1 COG:no KEGG:Apre_1806 NR:ns ## KEGG: Apre_1806 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 90 1 90 91 139 92.0 3e-32 MCENKKSSLIILNINGEQFILESDTELTRDKKNYIEAICETMYDESNEWYDDIYDMSPYD IAELFEKTVKEEIGITVTFKAIDLEVSILED >gi|325480783|gb|AEXN01000025.1| GENE 4 1830 - 3353 1485 507 aa, chain - ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 62 473 157 562 591 216 34.0 6e-56 MFIAKVKQKKYRQGKEYGSARWGESKDIAPYIDPKFENNVLITNTERLTMNSRPKNPKYA RNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYVVTDPKGTLVLECGKMLYENGYDIKILNT INFKKSMKYNPFAYLRSEKDILKLVQTIIVNTKGDGEKAGEDFWVKAEKLYYTALIGYIY YEAPEEEKNFKTLLDMIDASEVREDDETYMNPIDRLFEALEKKDPSHFAVKQYKKYKLAA GKTAKSILISCGARLAPFDIRELRELMSEDELELDKIGDRKTALFVIISDTDDTFNFVVS IMYSQLFNLLCDKADDVYGGRLPVHVRCLLDEFANIGLIPKFEKLIATIRSREISASIIL QAQSQLKAIYKDHADTIVGNCDSTLFLGGKEKTTVKELSETLGKETIDLYNTSETRSNQK SFGLNYQKTGKELMSQDEITVMDGGKCIYQLRGVRPFLSDKFDITKHKNYKLLEDYDKRN LFDVEEYLTNRDKVKLKSSYKINRLNI >gi|325480783|gb|AEXN01000025.1| GENE 5 3319 - 3624 305 101 aa, chain - ## HITS:1 COG:no KEGG:Apre_1805 NR:ns ## KEGG: Apre_1805 # Name: not_defined # Def: TraG family protein # Organism: A.prevotii # Pathway: Bacterial secretion system [PATH:apr03070] # 1 100 1 100 598 180 93.0 2e-44 MNNILEAILSDIKNLIKIDNPKKFILSNIPYLSFCYIGNIFSKHINSYVGGDIIDRLMVG ISDIGTLSYIPSLNPRDLLVGISVAATVKLIVYSKGKTKEI >gi|325480783|gb|AEXN01000025.1| GENE 6 3617 - 4351 855 244 aa, chain - ## HITS:1 COG:SPy0980_2 KEGG:ns NR:ns ## COG: SPy0980_2 COG3645 # Protein_GI_number: 15674990 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pyogenes M1 GAS # 143 236 31 124 125 105 56.0 5e-23 MISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAVYDHVDEEDKGVTKWN TPGGIQNISIINESGLYSLILSSKLPQAKMFKAWVTREVLPSIRKNGGYIAGQEKKTNEE LLADAILVANRIIAEREEEIEELRPKADYYDKLVDYSLLTNFRNTAKELGIPQNQFISFL MDKGLIYRDKKKKLLPYADKNKGYFEVKEWVDPLGTLVGIQTFITPKGRHYLLILLDSEG FYDE >gi|325480783|gb|AEXN01000025.1| GENE 7 4348 - 4833 672 161 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1681 NR:ns ## KEGG: MGAS10750_Spy1681 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 161 1 161 161 196 99.0 2e-49 MINEEVSRSSLNLEVRLAKATSKAILDALKKVHKQIEEQGGLKNVIKNNGEEVKLKDMVK KGQLEEINLKDPELKELKKILNKHGVKFSVMKDKETGNHSVFFQSKDIKVMEHAFKKAVK ASERKADRKDSITKTINKFKDMAKDTISKDKVKNKHKEQSL >gi|325480783|gb|AEXN01000025.1| GENE 8 4826 - 5653 647 275 aa, chain - ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 22 267 27 277 282 122 33.0 7e-28 MKNLKDFVLRENDIERNGHIYCKVCGKRVDGELLDLGFTKFIPRIKCECEIKRDKENAER EILTRISSLKRDCFSSPNQHQYTFERFLNEKGQSYKVAYNYAKNFEQMKEDNVGLLFYGD VGSGKTYLACSIANELIEKEQVKVKIMNLSQVINQIQKSAFKVDSNEIISNLSNIPLLIL DDLGIERDTSYAREQVYNIINSRYLKGRPTIFTTNLSLEIIQNPNIELEYQRIYSRILEM TIPVKVTGEDFRRKIHQEKLRKYKELLLYGGGIDD >gi|325480783|gb|AEXN01000025.1| GENE 9 5650 - 6423 699 257 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0865 NR:ns ## KEGG: SPAP_0865 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 257 1 257 257 409 96.0 1e-113 MNFDYFYNRQSEMYNFIRLPIVLMEDEIFESISIEAKVLYSYMLNRMGLSYKNGWIDEDG KVFIYYTIESIKDQFNCASEKANKLIAELDIKSGIGLIEKKRQGLGKPNRIYVKDFMSIF NNMELKNQEVRKTKFQKFDNRNSRDSNIESQDFRKSEGNYNNISNNELRKNDFSKGQKPY GIYKNIFLTDEEYKDLKNELGSRISEYIDRLSSYMKANNRAYQDHKATIINWYLNDQAKN VNDKSTRKMNYDIGESL >gi|325480783|gb|AEXN01000025.1| GENE 10 6531 - 6917 313 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325847956|ref|ZP_08170110.1| ## NR: gi|325847956|ref|ZP_08170110.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 128 1 128 128 206 100.0 3e-52 MKLFDFIFSIQESDTVNRYEDSKVDNLNFRHVNRLSPILTKSIDDEYEDNKYDYRDLLDD IFSYKQFENSDSDILIFDIKYLKHNSSMAFPSILMFKNLPESIEYEITSKHIPEIIKGKI YIKDNISG Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:47:09 2011 Seq name: gi|325480777|gb|AEXN01000026.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00063, whole genome shotgun sequence Length of sequence - 6466 bp Number of predicted genes - 6, with homology - 5 Number of transcription units - 1, operones - 1 average op.length - 6.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 2465 1879 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 2 1 Op 2 . - CDS 2473 - 4896 1523 ## COG3451 Type IV secretory pathway, VirB4 components 3 1 Op 3 . - CDS 4787 - 5197 415 ## MGAS10750_Spy1689 hypothetical protein 4 1 Op 4 . - CDS 5199 - 5489 472 ## FMG_0962 hypothetical protein 5 1 Op 5 . - CDS 5499 - 6362 1080 ## FMG_0963 hypothetical protein 6 1 Op 6 . - CDS 6373 - 6465 111 ## Predicted protein(s) >gi|325480777|gb|AEXN01000026.1| GENE 1 2 - 2465 1879 821 aa, chain - ## HITS:1 COG:lin0591_4 KEGG:ns NR:ns ## COG: lin0591_4 COG0791 # Protein_GI_number: 16799666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Listeria innocua # 735 821 107 186 224 74 44.0 9e-13 MDKKLKKDFQKKIIRNRDAPEKNLESKLVHSDDYTNKIIKTKDRFGDKISEKESKLIHEN VLAKDQKQDKLKDYQKSKNKERIRKEVLDNKNKVEETKQTNLEIKTDESIKLDEDLDVDF KKVNFGRENSRNINSNKLTTDNISAKAQPISNKKASSKRQVFKNYEDKLIHSKDKFQDKI NEKESKRIYTSEDKPIEAQKSKRVYRKDKLVKDEVSKNDSNANIDKKQKQKLYQENKFRD KGKISKEIDKESKLSQVDTEKTFDNSKVNDNNQEFIKDEKEISLNTSEQKKVNKKKTYYK RKNYESDKFTRKKIDDLKNESKKVIVKDSKKAKDVKDFISDKKIGELEKSKSKLKDNILK NKTKGGLSSGVLLSGAKSSELVRDYLSSGSDNTGVESGEKVANVSSKLQHGIRKYKLDKK KKSLKKLSKLDKKIRKRKSKLEFKSGLEDLKKSDTYIKKNRFKKFYQRKQMKSMIAKKHE TRLVDRVKKAILSLGKASKELIVRKSKMVLFLVIGLGLMLSIMIGGGSVGMSGLSNSVNS VMTATYLSQDTVLSEVNQEFSSMEYDLQSQIESVKTSHPGYDEYIINKEGEIGHNTHELL SYITSRCGEVKSASEVKGILKELFDKMYKLDFKEEIEIRTRTVARTRYDSRGNPYTSYEK EEYEYKKLIVTLKKKEMDEVVREIFKDYPDNVVHYEALLEAKGNMGDVFGTGNGDLGEIV DNPNFGNPGLAFDSATAKALFNEAEKHIGKRYVFGASGPSNFDCSGFVCWSFTKSGVKRM PRTTAWRIYKDYCNPVSPSEAQPGDIIFFHSTYNSGTPISH >gi|325480777|gb|AEXN01000026.1| GENE 2 2473 - 4896 1523 807 aa, chain - ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 283 777 74 594 617 90 21.0 1e-17 MKQRKKQISDLNLREKQLKKDRKEVRRLKTKKDPTNSILSVLLKKEKKRFTVEDTIPYIR MLPEGICQLDEKNYSKTISFQDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQ LGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITFTTEADNLEQA RAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKSFDFSYKDLKKKESTKSH VTPNIFNFAPANNFKFGKYIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVEQA EAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDERLF VVTIVMMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSVLPLGVNQVEIKR FLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNPNGLILGTPGSGK SFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMNYG DGDAPLKDKANFIMSMLELVVGGSGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPILGDL YDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDIKELGTQLKKIGML VIQDQVWNKVSLNRGSKSTRYYIDEFHLLLKDPQTASYSVEIWKRFRKWGGIPTGITQNV KDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLLFFGN TIVPFIDKFPKDTMLYKLMTTKPEEAK >gi|325480777|gb|AEXN01000026.1| GENE 3 4787 - 5197 415 136 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1689 NR:ns ## KEGG: MGAS10750_Spy1689 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 136 1 136 136 211 98.0 9e-54 MAYVPIPKDLDKIKTKVAFNLTKRQLIGFSVAGLIGIPTYLFMKKYLPNDVSIIVMLIVT LPIFFITLYEKDTLTFEKYFKFFYLHKFYQPTKRIRKEAYLEAKKKANQRLKSKGKTIKK RQKGSKKAKNKERSNK >gi|325480777|gb|AEXN01000026.1| GENE 4 5199 - 5489 472 96 aa, chain - ## HITS:1 COG:no KEGG:FMG_0962 NR:ns ## KEGG: FMG_0962 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 96 1 96 96 108 100.0 9e-23 MLKKKNCALLGLGILLGGTYEILKEKKRNEEIRNLKRRINRLGRCHNEFVMYQGEYNDRN EEKQEELEERISYLEEETTSNYDHILELSKEEVEGD >gi|325480777|gb|AEXN01000026.1| GENE 5 5499 - 6362 1080 287 aa, chain - ## HITS:1 COG:no KEGG:FMG_0963 NR:ns ## KEGG: FMG_0963 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 287 1 287 287 503 99.0 1e-141 MFGIFDKLTEFFKDMLLGGIKANLESMFLDINDKVGVIATDVGKTPMGWNGEVYNFIKNI NDNVIVPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMFIAVYLASHAFEFS MAVFDVAQNLVNKAAGVITTSATVSGDQIVAMVDTLKEKEIGELLMILVETSLVRIAIQC ISLTITLIVYGRMFEIYVYSSVSSIPFATMGNKEWGQIGTNYIKGLFALGLQGLFLMICL GIYTVLIRTVQITDIHASLFSILGYALLLGLMMFKSGTVAKSIMNTH >gi|325480777|gb|AEXN01000026.1| GENE 6 6373 - 6465 111 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no KSQGIKQLMAGGGIVLIGIKLIPLLANALN Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:47:51 2011 Seq name: gi|325480692|gb|AEXN01000027.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00053, whole genome shotgun sequence Length of sequence - 105356 bp Number of predicted genes - 87, with homology - 83 Number of transcription units - 42, operones - 22 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 98 - 136 4.1 1 1 Tu 1 . - CDS 184 - 762 411 ## FMG_1567 hypothetical protein - Prom 838 - 897 5.3 2 2 Op 1 . - CDS 935 - 1501 793 ## Amet_4635 hypothetical protein 3 2 Op 2 2/0.000 - CDS 1519 - 1743 262 ## COG4481 Uncharacterized protein conserved in bacteria 4 2 Op 3 . - CDS 1730 - 2596 909 ## COG0668 Small-conductance mechanosensitive channel 5 2 Op 4 . - CDS 2589 - 3107 390 ## Apre_0206 lipolytic protein G-D-S-L family 6 2 Op 5 . - CDS 3107 - 5098 2077 ## COG0296 1,4-alpha-glucan branching enzyme 7 2 Op 6 . - CDS 5138 - 7198 2556 ## COG0480 Translation elongation factors (GTPases) - Prom 7242 - 7301 6.9 - Term 7370 - 7398 -0.9 8 3 Op 1 4/0.000 - CDS 7400 - 7768 328 ## COG4687 Uncharacterized protein conserved in bacteria 9 3 Op 2 13/0.000 - CDS 7768 - 8697 1194 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 10 3 Op 3 13/0.000 - CDS 8706 - 9515 1135 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 11 3 Op 4 . - CDS 9525 - 10526 1423 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB - Prom 10696 - 10755 17.3 + Prom 10590 - 10649 10.6 12 4 Tu 1 . + CDS 10691 - 13549 3202 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like + Prom 13572 - 13631 7.2 13 5 Op 1 . + CDS 13662 - 14780 1282 ## Apre_0196 hypothetical protein 14 5 Op 2 . + CDS 14773 - 15879 1411 ## COG3853 Uncharacterized protein involved in tellurite resistance 15 5 Op 3 . + CDS 15889 - 16149 503 ## Apre_0194 hypothetical protein + Term 16157 - 16188 3.1 - Term 16805 - 16839 -1.0 16 6 Tu 1 . - CDS 16905 - 17195 235 ## COG2827 Predicted endonuclease containing a URI domain - Prom 17416 - 17475 10.4 - Term 17911 - 17943 4.0 17 7 Op 1 . - CDS 17957 - 19225 1587 ## SP_0464 cell wall surface anchor family protein 18 7 Op 2 . - CDS 19249 - 21462 2806 ## FMG_0187 cell wall surface anchor family protein - Prom 21485 - 21544 3.3 19 8 Tu 1 . - CDS 21626 - 36571 14398 ## Apre_1454 Cna B domain-containing protein - Prom 36788 - 36847 5.7 - Term 36734 - 36779 2.3 20 9 Tu 1 . - CDS 36872 - 37159 82 ## - Prom 37368 - 37427 5.5 - Term 37381 - 37430 -0.6 21 10 Op 1 1/0.000 - CDS 37437 - 38276 724 ## COG3764 Sortase (surface protein transpeptidase) 22 10 Op 2 1/0.000 - CDS 38245 - 39126 872 ## COG3764 Sortase (surface protein transpeptidase) 23 10 Op 3 . - CDS 39110 - 40018 997 ## COG3764 Sortase (surface protein transpeptidase) - Prom 40047 - 40106 6.5 + Prom 39986 - 40045 7.5 24 11 Op 1 . + CDS 40160 - 40342 291 ## gi|212695728|ref|ZP_03303856.1| hypothetical protein ANHYDRO_00249 25 11 Op 2 . + CDS 40361 - 40582 246 ## gi|212695727|ref|ZP_03303855.1| hypothetical protein ANHYDRO_00248 + Term 40583 - 40644 9.1 + Prom 40734 - 40793 13.0 26 12 Op 1 . + CDS 40937 - 41458 491 ## Apre_1260 RNA polymerase, sigma-24 subunit, ECF subfamily 27 12 Op 2 . + CDS 41538 - 42014 429 ## Apre_1262 hypothetical protein + Term 42025 - 42073 10.2 - Term 42020 - 42053 4.0 28 13 Op 1 . - CDS 42059 - 42781 932 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 42819 - 42878 4.5 29 13 Op 2 9/0.000 - CDS 42881 - 44236 2141 ## COG2848 Uncharacterized conserved protein 30 13 Op 3 . - CDS 44238 - 44507 517 ## COG3830 ACT domain-containing protein - Prom 44528 - 44587 12.0 - Term 44577 - 44605 2.3 31 14 Tu 1 . - CDS 44657 - 45250 972 ## COG1592 Rubrerythrin - Prom 45457 - 45516 14.6 + Prom 45739 - 45798 14.0 32 15 Tu 1 . + CDS 45854 - 47128 1649 ## COG0166 Glucose-6-phosphate isomerase + Term 47164 - 47198 3.2 33 16 Tu 1 . - CDS 47183 - 47827 582 ## Apre_1660 hypothetical protein + Prom 47649 - 47708 7.8 34 17 Op 1 . + CDS 47889 - 48758 488 ## Apre_1661 hypothetical protein + Prom 48761 - 48820 3.6 35 17 Op 2 . + CDS 48849 - 49088 176 ## Apre_1384 transcriptional regulator, LacI family 36 17 Op 3 . + CDS 49144 - 49947 1326 ## COG2267 Lysophospholipase + Term 49963 - 50013 13.1 + Prom 50002 - 50061 5.3 37 18 Tu 1 . + CDS 50100 - 50282 229 ## gi|325848492|ref|ZP_08170152.1| hypothetical protein HMPREF9246_1931 + Term 50445 - 50490 7.3 - Term 50509 - 50545 2.4 38 19 Op 1 11/0.000 - CDS 50584 - 51741 1783 ## COG0246 Mannitol-1-phosphate/altronate dehydrogenases 39 19 Op 2 . - CDS 51744 - 53639 2434 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component - Prom 53668 - 53727 9.5 - Term 53718 - 53751 2.4 40 20 Tu 1 . - CDS 53753 - 55111 1579 ## COG0534 Na+-driven multidrug efflux pump 41 21 Tu 1 . - CDS 55505 - 56689 1241 ## COG3919 Predicted ATP-grasp enzyme - Prom 56786 - 56845 9.0 - Term 57278 - 57313 1.3 42 22 Tu 1 . - CDS 57330 - 59255 2545 ## COG0441 Threonyl-tRNA synthetase - Prom 59500 - 59559 4.8 - Term 59296 - 59335 7.5 43 23 Tu 1 . - CDS 59567 - 59806 416 ## gi|212696509|ref|ZP_03304637.1| hypothetical protein ANHYDRO_01047 - Prom 60003 - 60062 9.9 44 24 Op 1 . + CDS 60033 - 61583 1681 ## COG2978 Putative p-aminobenzoyl-glutamate transporter + Term 61587 - 61622 4.4 45 24 Op 2 . + CDS 61656 - 61907 361 ## Apre_0256 hypothetical protein + Term 61916 - 61942 -1.0 46 24 Op 3 . + CDS 61968 - 62915 1021 ## HMPREF9243_1025 putative 2-keto-3-deoxygluconate transporter + Prom 63625 - 63684 8.9 47 25 Op 1 . + CDS 63798 - 63947 149 ## gi|325848536|ref|ZP_08170196.1| hypothetical protein HMPREF9246_1941 48 25 Op 2 . + CDS 63957 - 64172 218 ## gi|325848480|ref|ZP_08170140.1| conserved domain protein 49 25 Op 3 . + CDS 64231 - 64338 139 ## + Term 64346 - 64380 4.0 + Prom 64380 - 64439 7.7 50 26 Tu 1 . + CDS 64684 - 65205 142 ## gi|325848484|ref|ZP_08170144.1| putative lipoprotein + Term 65341 - 65388 -0.9 51 27 Op 1 . - CDS 65342 - 66112 1005 ## COG2013 Uncharacterized conserved protein 52 27 Op 2 . - CDS 66105 - 67232 1566 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Prom 67306 - 67365 11.2 53 28 Op 1 . + CDS 67602 - 69365 1757 ## COG1897 Homoserine trans-succinylase 54 28 Op 2 . + CDS 69375 - 70310 1132 ## COG0460 Homoserine dehydrogenase + Term 70314 - 70340 -1.0 + Prom 70560 - 70619 8.5 55 29 Op 1 25/0.000 + CDS 70654 - 71586 745 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 56 29 Op 2 42/0.000 + CDS 71579 - 72262 259 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 57 29 Op 3 . + CDS 72255 - 73046 688 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 58 29 Op 4 . + CDS 73055 - 73162 128 ## + Prom 73802 - 73861 2.9 59 30 Tu 1 . + CDS 73915 - 75249 1680 ## FMG_0026 hypothetical protein - Term 75276 - 75325 12.6 60 31 Op 1 . - CDS 75348 - 75464 101 ## - Prom 75595 - 75654 6.9 61 31 Op 2 . - CDS 75685 - 76404 569 ## COG4905 Predicted membrane protein - Prom 76435 - 76494 12.9 - Term 76485 - 76529 -0.6 62 32 Op 1 . - CDS 76747 - 77403 656 ## COG1285 Uncharacterized membrane protein 63 32 Op 2 1/0.000 - CDS 77410 - 78756 756 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 64 32 Op 3 . - CDS 78765 - 79484 1016 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 79546 - 79605 8.8 - Term 79491 - 79531 5.5 65 33 Op 1 . - CDS 79634 - 80554 1193 ## Apre_1673 hypothetical protein 66 33 Op 2 . - CDS 80554 - 81576 1212 ## COG1087 UDP-glucose 4-epimerase - Prom 81613 - 81672 8.9 67 34 Tu 1 . + CDS 81678 - 83330 2154 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases + Term 83449 - 83489 -0.0 - Term 83392 - 83440 -0.8 68 35 Tu 1 . - CDS 83592 - 84941 1451 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 84962 - 85021 2.6 - Term 84961 - 84991 2.0 69 36 Op 1 16/0.000 - CDS 85037 - 85678 846 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 70 36 Op 2 16/0.000 - CDS 85682 - 87073 1974 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 71 36 Op 3 12/0.000 - CDS 87073 - 88839 2581 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 72 36 Op 4 13/0.000 - CDS 88853 - 89164 412 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 73 36 Op 5 11/0.000 - CDS 89157 - 90152 1144 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 74 36 Op 6 11/0.000 - CDS 90163 - 90714 654 ## COG1390 Archaeal/vacuolar-type H+-ATPase subunit E 75 36 Op 7 16/0.000 - CDS 90724 - 91191 825 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 76 36 Op 8 . - CDS 91184 - 93124 2260 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 77 36 Op 9 . - CDS 93111 - 93434 548 ## gi|325848543|ref|ZP_08170203.1| putative ATP synthase archaeal, H subunit - Prom 93455 - 93514 9.5 + Prom 93411 - 93470 9.9 78 37 Tu 1 . + CDS 93691 - 93954 67 ## gi|325848523|ref|ZP_08170183.1| hypothetical protein HMPREF9246_1970 + Term 93966 - 94000 -1.0 79 38 Tu 1 . - CDS 93940 - 94902 1308 ## COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins - Prom 95119 - 95178 10.9 + Prom 94961 - 95020 13.9 80 39 Tu 1 . + CDS 95043 - 96257 1123 ## Apre_1693 hypothetical protein + Term 96269 - 96298 -0.3 + Prom 96399 - 96458 8.9 81 40 Op 1 24/0.000 + CDS 96659 - 97444 607 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 82 40 Op 2 17/0.000 + CDS 97422 - 98108 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 83 40 Op 3 . + CDS 98098 - 99090 1491 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components + Term 99109 - 99143 5.3 + Prom 99107 - 99166 8.2 84 41 Op 1 . + CDS 99218 - 99724 653 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 85 41 Op 2 . + CDS 99721 - 100710 1144 ## gi|325848475|ref|ZP_08170135.1| conserved domain protein + Term 100726 - 100785 10.2 - Term 100713 - 100772 10.2 86 42 Op 1 . - CDS 100775 - 101461 495 ## COG2717 Predicted membrane protein 87 42 Op 2 . - CDS 101488 - 105354 4977 ## COG3976 Uncharacterized protein conserved in bacteria Predicted protein(s) >gi|325480692|gb|AEXN01000027.1| GENE 1 184 - 762 411 192 aa, chain - ## HITS:1 COG:no KEGG:FMG_1567 NR:ns ## KEGG: FMG_1567 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 191 247 436 436 143 41.0 4e-33 MTSDLIENKDIGKNLIDSYLNDEVMTIGSFRSTLFYTKDIFRILRLKESQKILSEKENEF IKKHIPYTEKFDYQKDKEKILEEKDKYILKPIQGYASHGIYVGKEHDKKEFEKILDQIKD KDYIYQEYYTVKPIKFIKMEDDKAKLEDFSFVTGLFAYNKKFISPYMRIGNAALISSARQ YYVVSSLKIREK >gi|325480692|gb|AEXN01000027.1| GENE 2 935 - 1501 793 188 aa, chain - ## HITS:1 COG:no KEGG:Amet_4635 NR:ns ## KEGG: Amet_4635 # Name: not_defined # Def: hypothetical protein # Organism: A.metalliredigens # Pathway: not_defined # 5 179 4 178 441 130 37.0 2e-29 MINDQIKIDYEKIINENYQEYKKEYEKLLNNRKEYGATYKEEEIPTLYDAYFYSQEDYKL YDDMIDTFMSIVEKVTKEYVENESYRKLFALDPLTEKLILKDPGYNISTPIARFDVMYDG REDYKFCELNTDGSSAMLEDKSLADLMKETKAIEKLKEKYVIDHTDLLQSLVDSIEVLYY KTKKLKKK >gi|325480692|gb|AEXN01000027.1| GENE 3 1519 - 1743 262 74 aa, chain - ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 57 3 58 65 66 50.0 9e-12 MKKYKINDIVSLKKPHPCGENKWKIERMGADMKLRCLGCDKLVWLKRMDFDKRIRKIQNK EGKFVSIVNYEPED >gi|325480692|gb|AEXN01000027.1| GENE 4 1730 - 2596 909 288 aa, chain - ## HITS:1 COG:BH2666 KEGG:ns NR:ns ## COG: BH2666 COG0668 # Protein_GI_number: 15615229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Bacillus halodurans # 34 276 25 265 276 137 32.0 3e-32 MDEINDIDKMVEKSSLLPDFMRNKIIIDIISVAIVVLVCFFVLKLVHKIIIKFFNRNKKK INRNAAKLETLIKVFYSTVRVIIIFIAITIILDIFGINTSSLIATAGIGGIAIALGAQTL IADFVKGIFIIFDDKLRVGEWVVCSGVEGTVEEVNLRITKIRDYNGSLHIIPNSNITNVQ NYNRGAQRSEAYFCVSNDTKLEDVKAMIETVSQKIKNMPKYKKAFIEDLSFFEITEFKDF SYKVRVTSLVKIGTQWEISRKVRELIKIEMEKRNIKSSLLEEEVYEKI >gi|325480692|gb|AEXN01000027.1| GENE 5 2589 - 3107 390 172 aa, chain - ## HITS:1 COG:no KEGG:Apre_0206 NR:ns ## KEGG: Apre_0206 # Name: not_defined # Def: lipolytic protein G-D-S-L family # Organism: A.prevotii # Pathway: not_defined # 2 168 3 173 173 171 51.0 1e-41 MKIICLGDSFTQGYLVECNNYTRFLTKAGFEIINLGINGSTSSDMVKRYKKIKNKYENID CLIIFGGSNDFLNGESVNLAYSNVKSILDLSTAKKNLIIIPPFLEEEEVYPIYAYVNEKI NDFADKLYDLDALILDSRKIEPYYLDGLHMGKIFHQKLAEKIEKIIKDDIDG >gi|325480692|gb|AEXN01000027.1| GENE 6 3107 - 5098 2077 663 aa, chain - ## HITS:1 COG:YEL011w KEGG:ns NR:ns ## COG: YEL011w COG0296 # Protein_GI_number: 6320826 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Saccharomyces cerevisiae # 7 659 12 700 704 526 44.0 1e-149 MKDWKILEIDPWIKDYKNDIDLRMEEYKKQKNRLLKKGEKLKDFANAHNYYGFHKTKTGW IYREWAPNAKGLYLVGDFNNWDRHSHPLKKINDGDWEIFIKGIRTIPHKSRLKVMVDYGD SFQDRIPLFARRVERDENHDFSAILENPRKKFEWTDDKFKIKKDDLLIYEAHIGMACERE GVGTYKEFEKNILPRIKKEGYNTIQLMAIAEHPYYGSFGYQVSNFFAPSSWYGENDELKS LINTAHQMGLNVIMDLVHSHSVKNTNEGINLFDGTEYQFFHEGDEGNHPDWDSKLFDYHK PGVCHFLLSNIKYWLEEFHFDGFRFDGVTSMIYKNHGRGESFDNYSKYFSMNTDIEAINY LQLANELIREVKKDAITIAEDMSAMPGMCLSIKDGGIGFDYRLSMGMPDFWEKALEKRDE DWDMGRMWYELSTYRPEEKRISYVESHDQALVGSKTTIFRLADSAMYWDMEKKTHNIIID RAIALHKMIRWITISMGAEGYLNFMGNEFGHPEWIDFPREGNNYSFHYARRLWSLADNDL LKYDWLLKWDEKMLDQIKEDDQLGNDIFRLWLDNDRKVIAYRNKDIVYIFNFHPQNSYDS FQVPIHDKGKFKVILDTDDEEFGGLGRISKDTIYESKNLENTDYDGIEIYIPSRTALALK KVE >gi|325480692|gb|AEXN01000027.1| GENE 7 5138 - 7198 2556 686 aa, chain - ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 686 3 689 690 655 48.0 0 MKDYKTNKLRNLALVGHSGAGKTSLTESLLYHTKAIDRVGKVSDGNTVSDYEKQEIKRKI SIQTSIIPVEYKDYKVNFIDAPGFFDFEGEVLNALRASESALFVIDGENPIEVGTEKYWK YTENISLPRIIFVNKLDKENANFNQAVSDLHIEFSKKIIPLTLTLGEGEDFEGLIDVVDK KAYKYKDGVREEVEIPEIRLEEVDAVYEEILEVVAESDDALMDKYFSGESFTEEEFKEGF RKAIVNGSAVPLLAGSLEKEIGLDLLLDIITRFMPSPDHKAANIGFRVTDDYEEFEVSED SPFSAVVFKTIADPFLGKISIFKVLSGAIKKDQTFYDISKDKELKASNIFYLRGKEQFKT ERIVAGDIGAFSKQDSLQTGDTLCTKDNPIEYKRIKYPKPVLFYAIEAESKNDEDKISAA LKKLSEEDPTFEDRRDVETHQEVLAGLGNVQLEVLMDKLKDNYSVNTKVVDLKIPYRETI KGKSDVQGKHKKQSGGAGQYGDVFVRFEPCDEEFIFEEEVFGGAVPKNYFPAVEKGLKDS MEEGPLAGYKVVGIKATLYDGSYHPVDSNEQAFKSAARIAFKKGIEEAKPILLEPIMKLE IKVDDKYMGDVMGDMNKRRGKILGMEPQEDGSQIISALAPESEVLTYSIDLRSMTQARGS FSMEFEKYEEVPKDLTEKIVEANKKE >gi|325480692|gb|AEXN01000027.1| GENE 8 7400 - 7768 328 122 aa, chain - ## HITS:1 COG:CAP0069 KEGG:ns NR:ns ## COG: CAP0069 COG4687 # Protein_GI_number: 15004773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 122 12 134 135 118 53.0 3e-27 MVQSQNKEVDLSIKARCLNGFTSDGDIMIGDKAFEYYNEKNLEDYIQIPYKEISFVSASV LFGKKINRFAIHTKKNGNFIFTSRDNKKVLRALNTYIDSNKLRRSLSFFEVIKRGFKNLI KK >gi|325480692|gb|AEXN01000027.1| GENE 9 7768 - 8697 1194 309 aa, chain - ## HITS:1 COG:lin0145 KEGG:ns NR:ns ## COG: lin0145 COG3716 # Protein_GI_number: 16799222 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 7 309 3 303 303 365 60.0 1e-101 MTEVNEKRIELSRSDRIKVFNRHQLLQGSWNYERMQNGGWCYSIIPAIKKLYKSDEDRKA ALKRHLEFYNTHPYLSSPVMGVTLAMEEERANGAPIEDKTINSVKVGMMGPLAGVGDPVF WFTARPIIGALGASMALTGNPLGPILFFVLWNVLRMLFEWKSQEFGYKVGNEITKDLSGG LLGKVNLVASIVGMFIVGALVQRWVNVTFTVNVSEVTQQAGSFIDWNSLSSGSKGLQEAF KLYDQLGSAGLDQVKVTTLQDNLNQLIPGLVPMLLTLGICKLLKKNVSPIVIIIALFIIG IIASVLGIM >gi|325480692|gb|AEXN01000027.1| GENE 10 8706 - 9515 1135 269 aa, chain - ## HITS:1 COG:lin0144 KEGG:ns NR:ns ## COG: lin0144 COG3715 # Protein_GI_number: 16799221 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 269 1 268 268 262 66.0 4e-70 MSAISIILIVIVALLAGMEGILDQFQFHQPIVACTLIGLVSGHLKEGIMLGGALQMIALG WANIGAAVAPDAALASVASAIIMVLALQDGTGNVNNAINTSIAVAIPLSVAGLFLTMIAR TLAIPIVHGMDAAAEEGNFRKIEVLQMLAVLMQGLRIAIPAAALCFVSPKVVTSVLNSMP DWLTHGMEVGGGMVAAVGYAMVINMMSTKETWPFFAIGFAVAAIPQLTLIGLGVVGFSLA LIYLKLKESSSSNGSNNTGDPLGDIINDY >gi|325480692|gb|AEXN01000027.1| GENE 11 9525 - 10526 1423 333 aa, chain - ## HITS:1 COG:lin0143_2 KEGG:ns NR:ns ## COG: lin0143_2 COG3444 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 170 330 2 162 165 201 64.0 1e-51 MIGIILASHGEFANGIRQSGEMIFGEQEKLETAVLLPSMGPDDLRAELEEKIKKLDCQEI LFLVDLWGGTPFNQVSALMDGHEENWAVLTGLNLPMLIEALGSRLMEEKSHDLAKALLEP AKEGVKTKPESLMDDYNNSNQKEDVKEKLPKISGSIPEGTVIGSGKINIVLARIDTRLLH GQVATGWTKATNPSRIIVVSDNVSEDELRKSMIREAAPPGVKAHVVPIWKMAEIFKDPRF GDTRAMLLFETPQDALALIDLGVDLDEINLGSMAHSQGKAYVTSTVSMGKEDVETFEKLL DKGVKIDVRKVPANQPENFKNIMKKAKSELGLA >gi|325480692|gb|AEXN01000027.1| GENE 12 10691 - 13549 3202 952 aa, chain + ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 20 950 29 974 976 435 32.0 1e-121 MEKYILIKNKKYEKLGLDVFLYEHKKSGARINYIKADDKNKTFAIAFKTPPESSKGISHI LEHSVLNGSKKYRTKEPFMDMIGSSLQTFLNAMTYPDKTVYPVASENDKDFFNLQDVYLD AVFNPRVLDKEEIFLQEGKSIKIDEDGNFSVSGVVYNEMKGATTNPDTIIINEINKYLYK NSCYQYVSGGNPYDISKLSYGEFLDYYKRFYHPSNAQIFYYGDMDIEKYLENLDVEYLSH YEKKEIVADCRVFENYYKEPIFTKFQSNNEDKNKSYLTYSFLTNKRAHIKDQLANAILSI ALFNSDSSEISQRIYKEISPESFYARTGYGDISSIQITAQGTSYENLDKFVEIIEEELEK YANHIPKDSLKAAHALFDFSQRDQINSASKGIEYILMHNLDNEIFESLNLIDYINELGDL IETDYFEKQVRKYFLNNKTKLVLVAKPDKDYFKNIEEKIDQDLEDYKNSLSKDQIDDLKK KEERLKTFQERQDSKEDKATIPTLEISDLDLEVEKVPRQVEDDDFKFIYHDLDSAGMIYS ELFFDINHLGLEDLKYLCLISDFLGSIDTKKYSYQKLDDLIPINMAGLNFTVQNIKNKEG QINNFIKISFKTTLDRYENSLGIIKEIMSNTDFSDEKRIKDILKQIKAMFEMNMYDSGHS LALTRSFSHFDKLSYIKDQLNGFGYYEFIKKISKDVEDNFSSFKEKLEDLYKEIFSKNLL INITGSNEDYKILKTYIKKEFSDLDKIEKDKAKIEFNKSYYKEGILSDANVNYVSMGADL KEFSDKKLNLLALSSSIISNPYLHDLIRAKGGAYGAGLMVDKYGNVGTYSYRDPNIEKTV ENYKKIPEILENLKLEPNDLKNQKISKMGSYLKPQSIQSKTSLDFLRYLQGFSYKELHDK LFDIKNASLDDIINLKDAYKNILDKNNLTVFGNREKIMENKNYFDKIIDLDS >gi|325480692|gb|AEXN01000027.1| GENE 13 13662 - 14780 1282 372 aa, chain + ## HITS:1 COG:no KEGG:Apre_0196 NR:ns ## KEGG: Apre_0196 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 369 1 378 378 246 42.0 2e-63 MTDFDKENEKSLENSLNKAISDMDFSDISEKLKNSLDNFIDRTMAFVNYRPNNKPVLQTK NPQVCAQNLPEKSKAGLLKAGGIFSFIVTFASGLSVFDGGPDMFTDLIMAIAFGIMGVFS WKRFKEVDMISKDYTRFLKELGHNTVIPIRDLASAVQKSEEDTIKELMYMMNKGYFKQAR IVENDSLFLLDIPTFKLYKDQKSQMPNLSYEEKKQIENDAHKNVNIEKAENIIQIASKEI NSINLDISRIKSRSFLEKVIEIKKNIENIVNIIKRYPDKAYALDKFMDYYLPTTVKLIDA YAEYEIIESKDPKIKNSLFEIESSIETINQAFGKIQLELMEDRTMDIKTDIDTMKILLNQ EGYLEKDWSKDE >gi|325480692|gb|AEXN01000027.1| GENE 14 14773 - 15879 1411 368 aa, chain + ## HITS:1 COG:BS_yaaN KEGG:ns NR:ns ## COG: BS_yaaN COG3853 # Protein_GI_number: 16077094 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Bacillus subtilis # 36 365 44 381 386 211 41.0 2e-54 MSDIKLRLDGADQDPKLEAVSYKNEIKIDESIKFSPEEEKQIDDFSKKIDLEDSNIILQY GVGAQKKISNFSEKTLNTVRNKDLGEIGGLLDKVVTEIKTMDQDDGGVFGFFKKQKSKLD SMKLKYQSTEKNIDEIAKALDMHQITLLKDISMLDQMYELNEDYYKELSMYIEAGNRKLQ KTFTEDIPELENKAQSSNLPMDAQKANDLKAQANRFEKKLHDLDLTRMVSMQMAPQIRMV QSSNSIMAEKIQTTIVNTIPLWKNQMVLALGMSHTEQAIRAQEAVTNLTNDLLKSNADKL KQNTIDTARATERGIIDLDTIKYTNDRLIEAIDEVRSIQIEGKKNREDAKNELGRLEEEL KRNLLKNS >gi|325480692|gb|AEXN01000027.1| GENE 15 15889 - 16149 503 86 aa, chain + ## HITS:1 COG:no KEGG:Apre_0194 NR:ns ## KEGG: Apre_0194 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 86 1 86 86 129 80.0 4e-29 MAEKIEFKFDTQLLIAGEDLDEDEIFDHITENFEGDSLLAVGDEDLIKIHFHTNKPWEIL EYAQSIGDIFDVVVENMQRQADGLKG >gi|325480692|gb|AEXN01000027.1| GENE 16 16905 - 17195 235 96 aa, chain - ## HITS:1 COG:NMB0047 KEGG:ns NR:ns ## COG: NMB0047 COG2827 # Protein_GI_number: 15675987 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 6 93 5 92 94 88 52.0 2e-18 MSDYYVYILANKSNSTIYIGYTHNLEKRLYEHRNHVVEGFTDKYNCTKLVYYEYLDDKYQ ALSREKQLKRWSRDKKNNLINSINPKWRDLSFDWYS >gi|325480692|gb|AEXN01000027.1| GENE 17 17957 - 19225 1587 422 aa, chain - ## HITS:1 COG:no KEGG:SP_0464 NR:ns ## KEGG: SP_0464 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: S.pneumoniae # Pathway: not_defined # 135 414 125 384 393 94 29.0 1e-17 MIKTNKKIIRVVVLAILLHLVTPLLAFAKSGNSLLINTNFTDSEKKNVIVEYVDYWKIPD DKAKDLKDPQKNLDFIDIYKDKTDEEISKDLGEMKSSNKSEEKEGMYFASIDNLEKGAYL LRYRSKDSNRPYIPFLAIIDENTENPLTIYPKKAPDDLTLTKRDKNSGEVLKNVGFEVVN EKGEILSFEKIKDDKGEEKLTYKKDGTIKELFTDEKGQIKIYGLEEKVKFKETKPLKGYE SQVGKESDPAQTGSIEMLNEKDNPENYFSFIKIDGTNDDPLKGAVFKVQVKTDKGYEDVM ENDKIYTLTSDDKGEFKTKNLPYGQYRLVETKAPQGYIENTVPNDFEINENSHTKTIRIK NFKPTTPPPPTKTTPNGGTTVGSRLGKNLQSMAKTGDNTILLIMAIALLMIGVGIRFVRA KE >gi|325480692|gb|AEXN01000027.1| GENE 18 19249 - 21462 2806 737 aa, chain - ## HITS:1 COG:no KEGG:FMG_0187 NR:ns ## KEGG: FMG_0187 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: F.magna # Pathway: not_defined # 1 734 1 791 796 444 42.0 1e-123 MKHKILSFLTAFAMVFGIIAAPFVNASAADEKTNSVTVHKLLAKEGKTLQEIQNALKDKY VGSDKYLEGENEKEIKGLYTDVATEIPGVFFAMQKQVDGEWKYIAKDGKSVATIQDPTAE GFAEGVLGGETTPNGYEFDTSKLDQSKPTTYKIVEIHSLSSYKSKDGKVLTDKLAVPVEI TLPLVNDKGVVTAAHVYPKNTEDKPQIDKNFDKEDNGDTKGIKENEIVSNTKDLDIKTNE STREKSTAVKSVGQSVPYKVVTEIPAQTKWATAKWDDKMTEGLTYNKDLSIELKKGDETV TLTKGTHYTLEEDDNGFVLNFTKAGLELLNNKAKKQTVTLKYTAKVNDKSVVKVPESNDI TFHYGNNPGHGNTPKPNKPNDDGELKATKTWADGKWAKNEKAKFKLVDANTGKDIEAKDL VEPTDASKKAEFEAYKKDFKNEQEIGYGETTEAVWKYLDKNREYKVVETSVTYVDENNET KTLTGWEAEYAVKGKGKTEIKNYLTNNPTPLNPSEPKVVTYGAKFVKTNVEGERLPGAEF VVKNADGKFLVEGTKATRTEYEKAQTAFVDAVKAYNAKVKKGETPTADEKANVEKLEKAR DAAWNATLQNMDGFTADKKDAKGVLKLKSNELGQFEIAGLKPGKYTLVEVKAPKDYVDAS KATLEFGFTIGNDGEQDIKDIDFGIKDDKKADNAQKIVNKKVTIPQTGGIGSIIFVVAGL MIMGLAAYKMKANKEQA >gi|325480692|gb|AEXN01000027.1| GENE 19 21626 - 36571 14398 4981 aa, chain - ## HITS:1 COG:no KEGG:Apre_1454 NR:ns ## KEGG: Apre_1454 # Name: not_defined # Def: Cna B domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 2426 4976 2403 4877 4881 2738 64.0 0 MKKLLRKSMSLFMALFMVLQVMLPAFATKSKAEEVEPNSIKNIENLDQDPDSYFSLTDSQ KIYDKNKKKKDENKFTIALGISDTSSNFRLVKRNDLKLYDDRYFPTNEEASKEYWKIKDK LKDQGLDIEIDIIKDDQGYKIVGKNQDQDSEENSYGINYSYIDFKIIDDFDFNEKGNQKL LEKDKLVFNLEFTQNISPDPSYNLFKKDQDGNYEIKNHGQIFALIDNDKANIYDTSSLSN DFNELNQYKEEKKSEDERKKLEEEKKAQEEAQKQKEEAEKKAQEEKAKAEEEKKLEEEKA EKEEAEKEKLEKEEESKEDSKTEEKTPSQEKSEEEKKEEDKKEEKSAQEEKENKEEAQKA KEDAEKKAQEKKKEADKKLYFPKKEESPKSIMDKKDSEKSSFSKADKELKEALKNKKLGL EDLQKLLTSLGEKYKLNKADQEKLMTENDKSIRDLVEKDRQENFRALMLRQAASQESNSF DGKKFNLKTTMKVKAAPGWPIPSGWYFDVNLGPYLKEDIGQGINDLYNDKLGLVATAQIF KRGNDNIIRYIYVRKVTESIDLDIDQKLAFDTNAIGNQNPITLNIKVSPKNNPVQSLDPI TVYKNTPSPVTSEYVVKDEGETQTGTYPYQLDWRTTSQKLKDNKGNPIEKLVDLDKSKLT GAYVEWDIEVDTDKLVDPNNKLEFNNLNLTVFGSADQGLTNIYYKASKNKTDLDTTDGYI SSTNLGELLSQNSQISKNDLGDKLYIKVKATIDPDQVHETYSIGFRINPDSNYIQKMLED ITKKYESIPVPPPLKWLKGVEDARRFAEVPFNLVETNIPATFLGLTDKFTNERFYYDNTR TITANRKSDTKVDWYALDLIRRGESQDPALDKPDFDRNNGKDKQNIKAKKVYYLPLKDGG YRRTTQAGDVVLQNGQYFPGTIVSYEYPNHSGKRDDTYNFRPNLKDKKKFNVDESYDYEG GRVNLFTEKISDQDLANGYIAYTENPYPIMRINKNFDMVSCFNDRVNAPVYTGNTKVFLD KHEDVSGDYLITRLNESHGRPTPNYRLTNHLAGTLYDGVSLNHNGDLTQGQAMEELMKKI YFYGEEVKKEYSGENGGKEMHRMIEASMYQRVIHHFTDGKSLEDDYFQAPSSYNIDEWKV GHTLSGIRQTYPKTGWDGSFKGKDASRRINNEPGAPRKLKDNETKIGNYPPVQSTQYEMA EKLYKKVIASYKANNDWNSDKADSVKLVFYSHTDEGKYQELIAGRVMAPIEIDKYKKNGE KLKDAKFRFTNIDTGEKKEWTSTDDNKAHKLYLRPGRYKVQEIKAPQGFEKIKDFDIEVI RKEIHPDNGSYDAKKLPKIHVNDGFETEVSIDQTTVPKDTDGKTPLVVLDKDNKIKVKVT NIEDNLGKLEFIKRNKFIKLDGAEFRLRKIEASDLNDAKAKFQTPEKLTYDSKYDKTEKG NIGEFKFDQIPAGFYVLEETKIPEGYEKAPLYLIHAEEKTDASDKKKVEVSFVQEYKEVT NEKGEKKSKIADANLEKEKATRDGKKVDLPIIRNKTKKTEIKFRKVRTENLDTTKEHLGL GDAKFRLMSLKMVDGDFYMEEAYTDNSTKTKAPRDKVDGQQAEGGGYITFKDLKVGEYLL EELEAPKGYKKTDLYGWKLVVSLDEKGNFTHKLYEVPKAKQGENQDKIFNSKDLKEVKIS KIIKGHEKVDAYQIGNDARTIDIPFKKYKGKIVEKDGKPEVEATEVNEKLFGKDNKPVSF NLYKSDFYGAIIGEKDEKGNFIPINKEPIIQDEKGIFHLGGLEFGGYYILRETNPPKDYN KADDILLKVEAEAIANEGQMKVIVRDPNTNAKTDFHSVFKGVVDFLEKEKLGKFSIKKVG NAIGYTDGKGNPIRVGLRRAYFRLYTANENYEIEYKGKDKKYPKEYIQKVTPGVPITKDD GKGGQTGKSPEEIEKEAPNQGIVTFDQLKPGHYVLEEFRGPAGYERDPNPWYILVERDGT VKKYRDNPKTTRNPKQMDYTSNSPRFRMSGLDISEKLPMPRLMATPKESYLQELEYDASS DDLNIKVRASEVDTKDGNRTINLSISPKDKVLPGKKVQMVFLVERSKDSSLTSPGSNISD GRTQDKNINYAITQIAKKAKETGTSIDASFVEYTYNASNLKTTNTSLDEMTQSLEDKDYS TFYVDGEGGKSVSYKDYIGKANLSKRNDKVVDGSEYLNKNIDNYLSQISAKDGYDKKIMI DFANFNVGDVKKHSPKSGKYQFYKADIVNKFKNNGFDTFVTHIDQRSVNLGSGSISQYAY ETMPKLQFFEYFNNSGSPGRNSASYYVYSNMINKLFENEAFKRNEESYLVKDASLKIDLK THINLVDAKANIGANNLTSKISKDSKANSLQLDNINLKKGESLEFSYTVDLLNNKALYNT DYVILDGMKISKDGKEDIAIKRSDSDGNYLMTKKIKADTPTPDPGKTYNVTTSSTGGGSI SANPSTGIKEGDYVTITISPDPGKKLSQLLINGFPVEVTGSTYIFQMPADNMEVSASFID NKTEPHGNVDLKTIFTYTNQEDGKDNSNPAPQGFAGQLELFVKDQPVDRAPAGWSRVGEI KKAPYKGELDFLNLDPDRSYRLEYTRDQANASLWGTETTTVIDLDMTKAKESKDGKYLLE VIISNGNLVEIFNHDETGFRIPLRITKVNENKAALTGSQFKARKLVNGERVPIYEKNKDG TYTDTGKTGFPKYYDEKFDGVSEATGKPGDNYFRELTPGIYELEEIKTPDNTYRPPKDKN GNNMKWYFKVVINKEKVPRDANYMDITFDFEHTFSENDDFNIGITEAEKKKLIGKTIKGF KKGDPDFARYIEEVKDDGRSDPARPDAPYKWIHDARVTNYKNKTKLNFFKKDKASYQNIG GAEFSLRKAKLDKEGKLVFENNKPVYEEEPTKGADGSELTPEQLDSMRVQPYDKEKKFAK AISNDQLGVEFTNIGEGTYILEEIKPADGFKPTDSFLAITFTEDEKGSWKQEVKGYEKNE QGIYQEMSDTNKFFSKNTKGEFVSVNNEKAYIDLKFQKIEGKKAKVKEGDKIVEKEVPVE SADFKLTQVDKDGKKIEGGYDKTIYSYANSHFEFKYLPRGRYKLQEIRAITKFEKPDPWF FNVEQDKETHKLKIVFENDPDGTLDKSIGFRTKANGDPDYDKDGNYQDLKIRNYSKTNFS FMKLSSDLDDKGNKKALKDAYFRLTKVRFSMDEKAKAYEYHNEKDGAGLKKYVHGKKVTE YDPDGKVTKFTYDNKEYKYDENNNLVSVGGQTPTEEDKKVKPDAITNATGKYSALRRSQS SGKVDFQNLGEGIYQLEEVGIPEGYQSDTKQFKWIFKVEKTDDGLQIVRTYKDKEGKDLN VEEEYFKKYDPDYYKKYVDNKFNKNSNIEGDGKTDPYKITNTKTTTDLKWKKIGGRDTSN IIKKDTKFVLLKTSNDPNDLDSAKSGQSEFPPYQVESDEGTFEITNLAKGVYVLKETKAP DGYDIMDRQIGIKIYEDSKGVLQKEFFEIKTTKEGGKDLVKSAGDFQNLLNRNAQNPETH VDKDGTFYVINKSKPYFFNLYKGFMEEGKFKNITKGKLKVKIYADPADKKNTDTNVYEQT IDLSKNAPYRIDLNNNIQFGRDYLLEEVKSPDGYAKTNYRYKLRFAYNNSWDTPFVATLV AVLKEVEKEVEEDGVKKVVKEWVPLTNKEGKNISDSNQNLGDGQSINSGFPFQIVNKKTE VVFTKKGKDKVKGEDGKLKDKETPLKDVEFYLEKQDPDDIQKENQGYYPLTKDMKYIKSE VGRDKLTHYYIEEEDGKKTWLTGPFGNEEVTPENSRGIYKSDTDGKFKITNLTDGYYRVI EPQAAKDKNGEEYMKVNGPIKTFKVVDGKVKIHTYDKDTKKLIEAEVDATSKSTVTNIIN EKPGKGEFTLTKEDENGGKLDGVEFTLYKIDGETKVGDPQTTDDKGEIKFTGLPYGYYWL KETKTKNGYILDTKKKLIALGGDKEWKVPEKPKDDVSKSIKFDGKQAELVSTENSKRKDV VYPNKAEGIFAKYNFKIDEKADIKPGDYFTIKFSDNVDLDGINKDYYDKGQKGDQYFDII GPAGLLAKAKVNDDRRSITYTFTEYVKDYKPESMSMFLQLFPNRRKVDHTQDIDVTADIG KNIDTNSSDYHYSDYINIDYRGRNDKVGYDGYQNPTSDISSYMLRLDPEHKTFTAIVYYN PWNKYLTNKNITFTADEDIIQNSLSVRTYRKSGWGSHRDEWETGDLPDSYDVDFTRSDLK YISDFYRYDPIGNTGNTRKIYIPNNNLTQNGYNTNTYVIEIKGQLAGKDVKSLKTRVDYI DHNVSTLRSNGYYYYENTYTGNFETWSQFFNPGASGNVNKEIKLVNFKNKIEFAKVDGGV LSNVVDKEAENPNTLKDLGIGNPLKGAEFKLVKDGTDVDKSKRTSDDNGIFSWEGLAPGT YQVMETKSPDSEIYDLPKDAISSFEVDKDGNIVNIKKNKQILENYRKAEIKIRKTDQEGN TLDGAKFLLTATGKQKYTANIGTKQKDNTILFDKLPAGTYTLEEKEAPQGYTKSDKVWEL EVTKDGKVKWTNSFDDTDDEMKAVTVKSYTGEDKDNLKSEILGINTEAKTFRQKITIKVK PSDLEKARLILDSTNNDLKLSQTNTKVRLVQVGENNNILKPDNTTYTVQINNGDSPNLNL RINPPYREEKKNNPVGSSEGNTGEKTQTDKDAEREYQFIVDMPYKEDGRIGAKATYDVGQ VDKTTGKVTFGTEDIKTELDKYATKADLTISDAIVDMSLYKNKQVDKYLARDINLLTTDI GNIKQPSIYFQKIDETTKKSLQGAEFELQKYENGEYQAIGKNGKASGVLNPAWTATSGKD GKFSFESIPDGEYRIIETTAPSGYILFEQKEFKFKVKNGKIYYIDTKNSNISKTQLKKLE NEKEIVDNTSKDPLLITNKKAQYPSTGGPGVWIGFMVIGLIVMFTSVLTYFKRKDKLVVR K >gi|325480692|gb|AEXN01000027.1| GENE 20 36872 - 37159 82 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSFSSREISCENYSKYKNKISEQAKNKKWPSAIKPRQTITHLELVERSYAQIMSNNKPQS LTYKINKKSKKFIFNHLIKLFHSKIPFSNKKLIKY >gi|325480692|gb|AEXN01000027.1| GENE 21 37437 - 38276 724 279 aa, chain - ## HITS:1 COG:SP0468 KEGG:ns NR:ns ## COG: SP0468 COG3764 # Protein_GI_number: 15900384 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 5 278 2 281 283 127 28.0 2e-29 MNKNSTKKKSKIIGYILILLGLLTLAFPFSRRIYSNIENKSQIEKVIKAQKEDKQLDLIE KKAQEYNEIVKNSDISMVDPFTSKNLGSVNILENQDDIFAYLQIPKLDKNIPIYLNASYN HLAWGLGQVSGTSVPIGGESTRSVLAGHRGWWGDTMLLYADDLVKGDMIYVKRSDKVLKY SVCSKEVIGPYDWEKLKVIEGEDIITLLTCHPFIWPRPNRLLINAKRVEDKNEDPKDQIQ KTEISKKVKRTNYAYIGFLLIDLILIILVIKNLIKTIRK >gi|325480692|gb|AEXN01000027.1| GENE 22 38245 - 39126 872 293 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 23 287 3 270 279 268 48.0 9e-72 MRRKINIKKNLPFIIIFLIGFLIFSYPFISQKYYQIKANDEIVVFNKAKDEIDKKELERR MELARIYNQTLDPSKLVDPYDKKVKDAKAEYAKMLEVHEMLGHIEIPKIAVDLPIYAGTS DDVLEKGAGHLEGTSLPIGGSSTHTVITAHRGLPNALLFRNLNQMVEGDIFYIHNIKETL AYKVDKIQVVEPSNFEPILVVEKKDYATLLTCTPYMINSHRLLVRGYRIPYTQAIDDGSA NTPRLKPNFFQLFLVLLPILLFTIMVYLREKRNAKKMNMEVLEIEQKLNEKEK >gi|325480692|gb|AEXN01000027.1| GENE 23 39110 - 40018 997 302 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 25 288 3 266 279 342 59.0 6e-94 MKNKKKKSKISNILWRLIFLIGILVLLYPIISRFYYRIDSNNQVEVFNQGKNKLDKEEIQ RRMGLAKAYNDSLSGGPTNDPFTEKRYKEGRKEYARMLEVEEMIGHIEIPKINQDLPIYA GTSEDVLQKGVGHLEGTSLPIGGNNTHTVLTAHRGLPEKTLFTNLNELEVGDKFYIHNIE KTLAYQVDQIKVIEPSNFDDLMIAPGHDYATLLTCTPFMINSHRLLVRGHRVEYVESVDE ELIKENKTNWIFRILFFLALIIIIILLLRIRKLRKENKKTSSKIDQIKEKLDKLGENDEK KD >gi|325480692|gb|AEXN01000027.1| GENE 24 40160 - 40342 291 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695728|ref|ZP_03303856.1| ## NR: gi|212695728|ref|ZP_03303856.1| hypothetical protein ANHYDRO_00249 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1918 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00249 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1918 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 91 100.0 2e-17 MKLRIRYEVNDGEKLRKFSRTFTNLDDKLTNEDLSNFAKAFVALSEVENHIVEKVTEERI >gi|325480692|gb|AEXN01000027.1| GENE 25 40361 - 40582 246 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695727|ref|ZP_03303855.1| ## NR: gi|212695727|ref|ZP_03303855.1| hypothetical protein ANHYDRO_00248 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00248 [Anaerococcus hydrogenalis DSM 7454] # 1 73 1 73 73 106 98.0 5e-22 MNTKILKLSFKDSKGKGKMVSINHPKADLNDQIVKSQMQAMVDSKVLQTKDEKVTDLNKA YMENISRDDFNLG >gi|325480692|gb|AEXN01000027.1| GENE 26 40937 - 41458 491 173 aa, chain + ## HITS:1 COG:no KEGG:Apre_1260 NR:ns ## KEGG: Apre_1260 # Name: not_defined # Def: RNA polymerase, sigma-24 subunit, ECF subfamily # Organism: A.prevotii # Pathway: not_defined # 1 168 1 168 171 78 27.0 1e-13 MKICLENLDAIIEKYEPLLLSMSGRFPVFDRNEAYIMARDMIFEIVRDFDPDKGHFGGYL KYRLYFYFLNECKKERVDSLNDLDKNGVELIEKIDDENSLEDDFFKDLEIEELFKAIKTL KKQEREILYLKYDKNLPHKEIARLLNLSTKSITNYHYNIVRKLRKYFIDNDLF >gi|325480692|gb|AEXN01000027.1| GENE 27 41538 - 42014 429 158 aa, chain + ## HITS:1 COG:no KEGG:Apre_1262 NR:ns ## KEGG: Apre_1262 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 144 4 145 160 103 40.0 2e-21 MDKIIAILPTEIKGVGIGCEVYTEKRVFVDRRTPCLFLKHMASQRSISIKLMHKNMKEIL KVSRNLPYCIDSFNVFFPFKIRQTDNDDLRRGFVNCYFVEDIRNCEIILKNGMSLSSLNR DRALKNNFNNASKIMYMMFARELSKIRRSMDFIDDMAL >gi|325480692|gb|AEXN01000027.1| GENE 28 42059 - 42781 932 240 aa, chain - ## HITS:1 COG:BS_nagB KEGG:ns NR:ns ## COG: BS_nagB COG0363 # Protein_GI_number: 16080555 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Bacillus subtilis # 1 237 1 237 242 201 41.0 1e-51 MKVIISDSYEELSKKAADLFISILQEKPQSKLGLATGSSPVGLYKNLIKAQKEGEISFHW AKTINLDEYVGIDPQNEQSYQYFMNDNLFDHVNIKKENTHLPKADSNDEKYTEEYNKLLD EFGTRDLQVLGLGPNGHVAFNEPGEFLNKRTSIIELTDQTIEANSRFFDSKEDVPKYAIS MGMADAFNAKTLIVIANGKNKKEVVKKLLKTDKISTDFPASLLLLHPNCYLFVDKEAIED >gi|325480692|gb|AEXN01000027.1| GENE 29 42881 - 44236 2141 451 aa, chain - ## HITS:1 COG:lin0538 KEGG:ns NR:ns ## COG: lin0538 COG2848 # Protein_GI_number: 16799613 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 451 1 451 451 565 65.0 1e-161 MDTKQIIETIKMLDQEHLDIRTITMGISLLDCADSDYKKSCQKIYDKMMKETENFIKTTR LVQEIYGVPIINNRISVTPISLVAASSKIDDYTPYAEVLDKVAKEVGVDFIGGFSALVHK SMTKSDKILINSIPRALSSTDYVCSSVNVGSTRTGINLDAVKLLGEKIKDLAELTKDQDS LGCAKFVAFANAVEDNPFMAGSFLGVGEGDTIINVGVSGPGVVKAAIEKDRGKPINKVYE TIKKTAFKITRMGDLIGRDVAKRLGKEFGILDLSLAPTPAIGDSVGRILEEIGIDHVGGH GTTAALAMLNDAVKKGGLMASSSVGGLSGAFIPVSEDEAMIKAAEAGHLTFDKLEAMTSV CSVGLDMIAIPGDTPASTISAMILDEAAIGVINQKTTAVRVIPVIGKKKGEFAEFGGLLG YAPIMDIRDSSAEKFVNRGGRIPAPVHSFKN >gi|325480692|gb|AEXN01000027.1| GENE 30 44238 - 44507 517 89 aa, chain - ## HITS:1 COG:MK1213 KEGG:ns NR:ns ## COG: MK1213 COG3830 # Protein_GI_number: 20094649 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanopyrus kandleri AV19 # 2 89 3 90 90 74 38.0 5e-14 MKAILTIIGNDKPGIVYRVSELLYKFNINILDFNQTIMEKNFVGIMNVDMTDANESFEKI KDEMTKLGKEIGLELRLQNEDLFDKMARI >gi|325480692|gb|AEXN01000027.1| GENE 31 44657 - 45250 972 197 aa, chain - ## HITS:1 COG:CAC2575 KEGG:ns NR:ns ## COG: CAC2575 COG1592 # Protein_GI_number: 15895835 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 197 1 195 195 200 55.0 2e-51 MPELKGTKTASNLITAFAGESQATMRYTIAAKIAKKEGYVQIQQIFEETARNEQVHAKQF YKYLKEEFKLDTIELNPDYTAFPVVFHDTLTNLEGAIGGENEEAEDMYPSFAKVAREEGF EEVARSFENIAKVEAGHRDRYQKLHDNIENGTVFEKEEAVIWKCWNCGFLYEGKKAPKIC PACKHPQDFFEVANFNY >gi|325480692|gb|AEXN01000027.1| GENE 32 45854 - 47128 1649 424 aa, chain + ## HITS:1 COG:BH3343 KEGG:ns NR:ns ## COG: BH3343 COG0166 # Protein_GI_number: 15615905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Bacillus halodurans # 13 424 21 438 450 474 55.0 1e-133 MKIDFNNVDLSNLDSYKEKSLKAFSTLMNKEGEGNDFLGWIDRANNLDMEEYERIKKASK KIQENSDCLVTIGIGGSYLGTKAVDYAMKGYFSKSDKTELIYAGHQISGEYLYELLDYLK EKEFSINVISKSGTTTEPAIAFRFVKELLEEKYGKEEAKERIFVTTDRQKGALKDLADKE GYETFVVPDDIGGRFSVISAVGLLPLCAAGIDIDKFVAGFRKGIENYTVDSFEDNKAIQY AAIRNMLYEDGKALEVLVNYEPKLKYVSEWWKQLFAESEGKDGKGLFPVSVNNTTDLHSV GQMIQDGERNLFETVIKVQKADKDLTIKEDADNLDGLNYLAGRDMSFVNEKAMEGTIIAH VKGQVPNILLTIDDVSSESLGELFYFFEIVVGVSGYMLGINPFNQPGVEEYKTQMFKLLG KPGY >gi|325480692|gb|AEXN01000027.1| GENE 33 47183 - 47827 582 214 aa, chain - ## HITS:1 COG:no KEGG:Apre_1660 NR:ns ## KEGG: Apre_1660 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 47 210 39 203 204 99 40.0 8e-20 MPRKKRSEAFAEKSQRNRSQRSDRISRNKKRELRRKKYRRRRIISLIAFVLILLSPLFIY QKFINTPQRSINKAVEAIKDLDYDEQNKYFDKIVKVEDVLKESYSTNKKEQEEFLKANFK NLHVLVKDKKKTKDGLEVDVEVSNVCYIDVFDNLKKDRLHKTFIKELSDEKQEKKTVRAK LLLDKKLSYYKIYESRDFVNGILGGALKYSENEK >gi|325480692|gb|AEXN01000027.1| GENE 34 47889 - 48758 488 289 aa, chain + ## HITS:1 COG:no KEGG:Apre_1661 NR:ns ## KEGG: Apre_1661 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 39 278 42 284 284 75 32.0 3e-12 MKKQKLIIADLIAIIFTLITIYLPLFTNKITFLPMYFVYIFAYFAVIFSNQKDKKVLTFF IPLFTLSLILILLNKVDIYNLKIIKTQVIGIFRKNYSLILYIFALYFLERLSTKIFGSYF SIGLALVSLGIFLIIFNTKYLESLRKYKDYFFYIFIYFSFARIYPAKKINKYLYIIIILL FFLEILVIDKYKIFIGFHISLILIIYLILKSNVYEINFEKYFLNGLIYLYPFINIILAKI LNFDSPIKEVATGLIVFFLTLIFYQIKLGFFDYLFLGIHKEKNKGDVAE >gi|325480692|gb|AEXN01000027.1| GENE 35 48849 - 49088 176 79 aa, chain + ## HITS:1 COG:no KEGG:Apre_1384 NR:ns ## KEGG: Apre_1384 # Name: not_defined # Def: transcriptional regulator, LacI family # Organism: A.prevotii # Pathway: not_defined # 3 72 262 331 332 88 64.0 8e-17 MANEGIKIPEDLGIIGFDNIHARDFTNQAITSIDQRISDQVDFSIDNLLKILNDEKAETN IVLEAKLIEKESAFRGINI >gi|325480692|gb|AEXN01000027.1| GENE 36 49144 - 49947 1326 267 aa, chain + ## HITS:1 COG:MT0192 KEGG:ns NR:ns ## COG: MT0192 COG2267 # Protein_GI_number: 15839561 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Mycobacterium tuberculosis CDC1551 # 24 267 74 323 323 142 35.0 7e-34 MTNFIESFDGTALFYNKEEAKNAKAAVVIVHGLAEYSGRYDYVAEKFHNAGFSTYRFDHR GHGKSEGERGYYKDYEDMLEDVNVVVDKAIEENPDKPVFLLGHSMGGFAVSLYGAKYRDK NLVGVITSGGLTHDNNKLTEMVGPGLDPHTELPNELGDGVCSVKEVVEAYVADPLNLKKY QLGLLYALKDGIAWFKENEKDFSYPVLILHGRDDALVNFKDSFDFFENNSSKDCQIKIYK GLCHEIMNEYAKDEVIGDIIAWIDNRL >gi|325480692|gb|AEXN01000027.1| GENE 37 50100 - 50282 229 60 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848492|ref|ZP_08170152.1| ## NR: gi|325848492|ref|ZP_08170152.1| hypothetical protein HMPREF9246_1931 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1931 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 73 100.0 3e-12 MLSKFFKKVPAATIVVPMILASILNTLMPNLLRIGQITEAITSKEILNAIIDITLVVVGS >gi|325480692|gb|AEXN01000027.1| GENE 38 50584 - 51741 1783 385 aa, chain - ## HITS:1 COG:CAC0157 KEGG:ns NR:ns ## COG: CAC0157 COG0246 # Protein_GI_number: 15893452 # Func_class: G Carbohydrate transport and metabolism # Function: Mannitol-1-phosphate/altronate dehydrogenases # Organism: Clostridium acetobutylicum # 4 367 3 365 384 200 37.0 4e-51 MKLAIQFGAGAIGRGLLGKIIHDSGYELVFVDVFDKIVDQINEDGYVGLELMDHDNEAIK LDKVSALCSTKTEDLEKIYEKIAQADIITTSVRVENLDSTSKILVKGLEKKEANSPKVDI MAFENAFRASDILKNHILENSNFKEEDLDKLATFPNTVTDRIVQNKMVDGRSVVEISDDF EAVIEQTKLKDPNSKPIKDAEYTQNIDEELERKLFLVNGVHAATSYFGHHKGYTMMDEAF GDEEILSDVKKLMEESSEVLIKKYGFDKDQLDKFKEAKLNRFLKTASHDEVARVARDPQR KLGKTDRLVSPAISAYDNNSSYDYLSKAIAYAFKYDNKEDEKAMEIQEYIKENGIEKAIE KYTEITKKQRPGLFEKILDQYKKID >gi|325480692|gb|AEXN01000027.1| GENE 39 51744 - 53639 2434 631 aa, chain - ## HITS:1 COG:BH3854 KEGG:ns NR:ns ## COG: BH3854 COG2213 # Protein_GI_number: 15616416 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Bacillus halodurans # 1 464 1 467 468 491 53.0 1e-138 MSEKKSVKSRVQNFGSFLSSMVMPNIAALIAWGFMAALFIPTGWLPNENFNKIVGPLLKY AIPMLIAYTGGNLVNPKMGGVVGVVALLGAIAAAENEVMLVAAMLLGPLAGWLLKKLQDA YDGHVPQGFEMLVNNFSAGFLALGLSLISYVLVAPLISGLTGILAAGINFLLEKSLLPLV HIFIEPAKILFLNNAINHGIFTPIGLDQAATSGKSILFMIESNPGPGLGVLLAYTFFGKK EERSSAVGAAIIQVFGGIHEIFFPYVLMNPKLILATILGGASGTFTLEILKGGLVASPSP GSILAWLAMTPKGSYLATILGFVVATLVSLLVASFILKTSKSSKTFDQASKDLSDSKNSS KSSLENETKSFSNISKIRFACDAGMGSSAMGASILKKKLKQAGLLEGIDITNVAIANLPK DVDLVVTHKDLTERAKQIVPNAIHVSVDNFMQAPEYDEVVERLKESENPQLSNENIEKEE VEEIKEEKTDILTKENIVLDQNFQNKEEAIAKVQEMMEKSGFVGKGYQDGMLQREKEAPT HFGIGLAIPHGTNQTKKEIKKSGLVVITSKKGVNWDGELVKLIIGIAGKGDDHLQILANV ANNVNTEEIVNELVENGNKDQIYEILTREEE >gi|325480692|gb|AEXN01000027.1| GENE 40 53753 - 55111 1579 452 aa, chain - ## HITS:1 COG:MA1121 KEGG:ns NR:ns ## COG: MA1121 COG0534 # Protein_GI_number: 20089987 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 3 445 9 451 475 217 32.0 3e-56 MAEVKSEKLGSMPEGKLLFEMSLPIIISMLVQAIYNIIDSIFVARLSEKALTAVAISFPI QNVIIAFSVGISVGVSALLSRYLGMKNQKKANSVAVHGLILAGILSLIFVIIAIFFVESF IKMQSHDPKIISYGNDYLHVVCLFSFGVFFQILFEKLLQSTGLTFYTMITQGVGAIINII LDPIFIFGLFGFPRLEVKGAAIATVVGQITGALVGLSLNLIKNKEIKFSFKNFSMSHLIF KEIFSIGLPAALMNAITSFAVFFINTILRGFGQSAIAAYGVMFKLQSFEFMPILGISNAM VPIISYNYGAKNKERIKKSIKLSITWSTLMIIFGMVIFIAFPEEILNMFSATPKMKEIGI PMIRIISISYLPVGFSIVCASIFQSLSSAGIALFEPFLRQFIILLPLMYIIGQRTGDIDK IWYSFIIAEFIAGLYCVYFLRKDYKEKIEKVM >gi|325480692|gb|AEXN01000027.1| GENE 41 55505 - 56689 1241 394 aa, chain - ## HITS:1 COG:L93420 KEGG:ns NR:ns ## COG: L93420 COG3919 # Protein_GI_number: 15674209 # Func_class: R General function prediction only # Function: Predicted ATP-grasp enzyme # Organism: Lactococcus lactis # 3 345 6 342 408 139 28.0 1e-32 MKDYNVIILGTDISCYSLARSYNEAFGKKAIVCAQAVLTPFVDTKIADIYLKEDFATTAK TDDAFVEHLNYIAKKNPAKKNIIFMPYEEYLNKILRNMNKLDFNIELPYPDEEMAYKLFH KSEFYKYLDQIGVRYPKTQVISKDNINSLKLDGDLFMKPDNFEEFENLEDLENMKKGYKL TSKEECISVLNDIYKSSYSSKMIVQEYINGGNGCEYSINGYRAKDGKISMALARNILSDH RDMWVGNHLVQVDYNDNRLYDLAKKMVDSMDYNGLFNFDFKIDSKTGEVYVFEMNIRQGR TFYYSTLAGVNLIEATVNDLVFGKSQEKRTNNKFLLRTLSNKCSKEHIDKTFMNIYEERE TNGLNAMENSKDNSLKRQFYVKRSIRNLEKEIYG >gi|325480692|gb|AEXN01000027.1| GENE 42 57330 - 59255 2545 641 aa, chain - ## HITS:1 COG:CAC2362 KEGG:ns NR:ns ## COG: CAC2362 COG0441 # Protein_GI_number: 15895629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 635 1 633 637 722 54.0 0 MIKIKLPDESVKEYEKGVSVGDVTKDISEGLFRSAVGAVVNGKVMGYAEPINEDSDFKVV KFEDKEGKEIFWHTSSHVMAAAIKEMWPEAKFAIGPAIDNGFYYDIDLEHRFVPEDLPKI EAKMKEIAKKDLKMIRKEISRAEALEYFKKENQEYKVELIEDLPEDEIITLYEMGDDVFV DLCKGPHLLSTKAIKAVKLNSIAGAYWRGDSDRKMLQRIYGISFEKKKQLDEYIKLQEEA KRRDHRRIGKEMNLFSFHEEAPGFPFFKENGMILRHELLNWWTDVLAENGYGEIQTPLIM NEELWHRSGHWDHYKENMYFTKIDGENYAVKPMNCPGSVLVYGEEPHSYRDLPIRLAEYG QVHRHELSGALHGLFRVRTFTQDDAHVYCLPSQVKDEVFKMIDLADLLYSTFGFKYKIEL STRPDDFMGKIEEWDFAEKALEDALKERGIDYQINPKDGAFYGPKIDFHLEDAAKRTWQC GTIQLDFQLPQNFDLTYIDENGEKKRPVMLHRALLGSVERFIGSVTEQFAGRFPLWINPK QVAIIPVSDKFADFADDLAKKIKKAGYRVDVDHRSEGVGYKIRQAQLMRTNYMLVVGENE EKSGKLTVRNRDGEETKDVSFEEFIEKLNQERDSKALESIF >gi|325480692|gb|AEXN01000027.1| GENE 43 59567 - 59806 416 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696509|ref|ZP_03304637.1| ## NR: gi|212696509|ref|ZP_03304637.1| hypothetical protein ANHYDRO_01047 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01047 [Anaerococcus hydrogenalis DSM 7454] # 1 79 1 79 104 127 98.0 3e-28 MENNKEYQKALAIVTKRYDSYKDIKKLGVWKDYNVYEPVVENKAALIGPNEYLLVNGKEN RWTNLKEEKEIMTYFAKKA >gi|325480692|gb|AEXN01000027.1| GENE 44 60033 - 61583 1681 516 aa, chain + ## HITS:1 COG:FN0470 KEGG:ns NR:ns ## COG: FN0470 COG2978 # Protein_GI_number: 19703805 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Fusobacterium nucleatum # 17 509 12 502 512 501 57.0 1e-142 MSKKNKKTRDANDVGGFLKSVEKIGNKMPHPAIIFLFLSMIVVVISHFAAKAGLSVTYFD AKAGEEVTKKAISLLNLEGLRYIFNSATDNFMGFAPIGTVLVAMLGVGVAENSGLFNATL KNLLSDVSPTLLTVAVIFAGIMSNIASDAGYVVVIPLGAMIFAAAGRNPLAGIAAAFAGV SGGFSANLLLGTTDPLLTNITNEALKAVGMDIQISATCNLYFLFISTFLITLVGTLVTTK IVEKNLGEYTGNYKADHKPLTDLEKKGLKNALISLIIFVIIMALLMFPKNAPLKSFDEKT GLINLDEFLSYGLIPAMMLLFLVPGYVYGRTVGTIKSSHDLIDAMTKSMAGMGGFLVLAF FAAQFVEYFSKTNLALILAKNGAEFLQSIHLKGLPLLLMFILLTAFLNLFMGSASAKWAI MAPIFVPMMAELGLSPALTQVAYRIGDSSTNIITPLMSYFAMIVVFMQKYDKDAGLGTLT SMMLPYSLAFLISWSGLMIVWYLLGLPLGPGAPLMI >gi|325480692|gb|AEXN01000027.1| GENE 45 61656 - 61907 361 83 aa, chain + ## HITS:1 COG:no KEGG:Apre_0256 NR:ns ## KEGG: Apre_0256 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 83 1 83 84 89 66.0 5e-17 MKIDGDNLVSISEANKNFSKIARMADKKGSAVILKNNKISYVLLPYKEIEKEEIFPDENM EEIAQRLIEKIKDEYNIQLKLDL >gi|325480692|gb|AEXN01000027.1| GENE 46 61968 - 62915 1021 315 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_1025 NR:ns ## KEGG: HMPREF9243_1025 # Name: not_defined # Def: putative 2-keto-3-deoxygluconate transporter # Organism: A.urinae # Pathway: not_defined # 1 299 1 299 315 290 54.0 4e-77 MLKFMKKIPGGLLLIPMLISALFATFAPNLFKVAGITEALFTTKGINYIVGLICFLSSTA LDLKKLKKVIRKQGSILLLKVILCFGFGILFIKIFGLGGVFGISALTFITAICSLNPSLY LALSHDYGSEDDEAAFGLTGILCVPAFPILVYSIAKASKIDWTPVISVLIPIILGIIIGN LDKDMAGFFGPAVTILTPFMGWAFGAGINIINAVKAGFQGIILTLIFYLLMFPIIFFFER KILKENGITTFGISSIAGLSVSVPAIIANSDPSVAAMSQTAIAQIALGVVLTSIITPILT GIYTKKMGIEKNKRA >gi|325480692|gb|AEXN01000027.1| GENE 47 63798 - 63947 149 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848536|ref|ZP_08170196.1| ## NR: gi|325848536|ref|ZP_08170196.1| hypothetical protein HMPREF9246_1941 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1941 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 49 71 119 119 84 100.0 2e-15 MAQFMLRVPTMAINFVFHTIVLIIILPKLAKILRIEIKKLGAQPENAPY >gi|325480692|gb|AEXN01000027.1| GENE 48 63957 - 64172 218 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848480|ref|ZP_08170140.1| ## NR: gi|325848480|ref|ZP_08170140.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 71 1 71 71 87 100.0 3e-16 MKLLKIISLILSLAFIFFGYNIYFRKKYKLINNFEKDYKNGLKDEKYAKKVGMVELILGI LFFLIFLKISL >gi|325480692|gb|AEXN01000027.1| GENE 49 64231 - 64338 139 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHIEDLLTTIALNIMANAIYDCIKILIEVKSRAKH >gi|325480692|gb|AEXN01000027.1| GENE 50 64684 - 65205 142 173 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848484|ref|ZP_08170144.1| ## NR: gi|325848484|ref|ZP_08170144.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 2 173 1 172 172 145 99.0 1e-33 MLFFKAFATASFGSFIFVKSIALSSWSSSLSCSFEITSPLSASIFASNSSFALNPLISYE YFPLSSSNSTDETSISSSLKAFLNFSTASPIEIANSFSSIPVVAWSTFSLASSFFSSAFS FVEATFSDTAAFVLLAAFFASSFACLAFSPEHADSKRARASADAPYFKFFSIS >gi|325480692|gb|AEXN01000027.1| GENE 51 65342 - 66112 1005 256 aa, chain - ## HITS:1 COG:CAC0556 KEGG:ns NR:ns ## COG: CAC0556 COG2013 # Protein_GI_number: 15893846 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 251 1 251 252 298 57.0 6e-81 MFKINNFYDNPNIEIKEEKGPFKVLEYQKNLSVDKNFAMSEYFSSKMQIRKRQLACDLSI SPVTSQTGAMQWMVGDVELTSGIKGIGDFFSKSIKGSVTKESAVKPEYRGSGRVILEPTY KHIILIDLAEWNNSIVLEDGYFLACTSNLKQKIKTRTNISSSLMGNEGMFNLKLEGDGIL ALESPIAKDDLIEIELENDQIKIDGSYAIAWSDSLDFSVKKASKSLVSSAMTEEGFVNVY TGSGKILLAPLDYKEK >gi|325480692|gb|AEXN01000027.1| GENE 52 66105 - 67232 1566 375 aa, chain - ## HITS:1 COG:SP2056 KEGG:ns NR:ns ## COG: SP2056 COG1820 # Protein_GI_number: 15901876 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Streptococcus pneumoniae TIGR4 # 4 373 6 381 383 398 53.0 1e-111 MIYKADYVILEEKIEKDLFVEVENGKIKSLSKNEPEKFINLEGILASGLVDTHIHGYKNE DIMNAKKGSLNIISKGLLECGVTSFLPTTLTDSTEKLNQAVKIVGQEYENLEGAKVRGIF LEGPFFTEKYKGAQNEKYMSDPDIEKLKKWKELSRGLVNKIAIAPERKNTEEFIKKANAM GVYVALGHSDASYDQAIKAVDDGANIFVHTFNAMSGLHHRNPGMVGAAMNSDAISELICD GHHVNPAACEILINKKGYQKIALITDCMMAGGMPDGAYKLGDFPVEVKDGTARLESGNLA GSILKLKEAVKNVVDWDIADIFEAVQMASLIPAKSVGIDNICGKIKVGYDADFILLDYDL NLLKTFLNGQEKYSV >gi|325480692|gb|AEXN01000027.1| GENE 53 67602 - 69365 1757 587 aa, chain + ## HITS:1 COG:TM0881 KEGG:ns NR:ns ## COG: TM0881 COG1897 # Protein_GI_number: 15643643 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Thermotoga maritima # 1 301 1 303 304 270 43.0 8e-72 MPVILSDKLIKEEVLKKENIFTINKKRAQSQDIRPLKLAIVNLMPNKEETEIDLLKLISA NSLQIEVDFIRTVTYKNKHSDPKRLESLYKSYDDIKDEKYDGMIITGAPIENIDYDDIEY WQELKKIFDYARKNVYSTIFICWASLAALNYYYGIDAFSYDEKISGVYPFLKESESRLFD GFDDVFNMPQSRYKGVDPSLLDPFDDLEVLAKSDHIGLSLAASKDLRFIFSLGHFEYGKY NLDKEYKRDLKKDKNTKRPVNYYFENSSKVNMSWKSASSLFYSNWINYAVYQNTPFKIEN IESKSVSKFGGSSLSDAGQFKRVKDIINKKSDRDLIVVSAPGKRNDQDIKVTDLLISLTD SNQKIDRLERELLANENIRDEILSRLRERFYEIIHDLDLKISLKKEIDKSLYILKDSLKR DYNLSRGEYLNAKILASFLNYDFVDAKDLIIFNEDGLDLEKTYQKIREKIKEGDKVVVPG FYGSLDGEIKVFERGGSDFTGSILASALDCSVYENWTDVSGIMNNDPKKDKNAKKYEKLA YQDLEKIINKGAGVYQKDAIGPVSDKNITIKILNTNRPDDSGTTIKD >gi|325480692|gb|AEXN01000027.1| GENE 54 69375 - 70310 1132 311 aa, chain + ## HITS:1 COG:SA1164 KEGG:ns NR:ns ## COG: SA1164 COG0460 # Protein_GI_number: 15926909 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Staphylococcus aureus N315 # 2 307 4 317 426 175 34.0 8e-44 MIKIGLLGFGVVNSGVYEIFEERRKYIEEAIEDEFSIEKILVKNPKKHSDIKNLLVDNIS EIIDDDSIDLVIEATGEVEAIEDDIKKILSKKNLISTNKALISKNFEEFNRIKKENKTKL RFDASVGGAIPVIENLYTISILDEVEEISGIFNGSCNFILSKMEEGYSFKDALEKAQELG FAEADPKDDIEGFDSLRKLRIAASILFRKEIKEEDIDLEGITKIKKDHVKKASERGLRYK LIAYANKDGIYQVRPELLEKNSLFGSIKDNENIFQIKSSNSKDLILKGRGAGKRETGFSV LNDFLKIYSKN >gi|325480692|gb|AEXN01000027.1| GENE 55 70654 - 71586 745 310 aa, chain + ## HITS:1 COG:BS_ycdH KEGG:ns NR:ns ## COG: BS_ycdH COG0803 # Protein_GI_number: 16077354 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus subtilis # 6 308 3 315 319 178 36.0 9e-45 MKEKRKIFLGIFLILGLFLASCSNNSKNISKKENSSEKKLIYTSFFPVEELTKRIVGDKF EVKSIIDKSQEPHSFELKTEDIKNIIKADLVIYNGAGMETFIDDLKNFTDDKEKFVDLSK NLTLLSSAKDGKVSKDKVNPHTWLSIKNAMVELEEIYEKVSEIDPDNKDFYKKNLDKNLD MFKKMDEKFANELKNVDQNKRYFVVSHAAFNYLADDYNLKQVAVTGISPEDEPSAKQLKT IADFVKKHDISTIFFEGKATPKVAETLAKTTNTKTSTLYTMENLTKEEARMGYLKLMEEN LKSLKESFDE >gi|325480692|gb|AEXN01000027.1| GENE 56 71579 - 72262 259 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 5 190 11 201 318 104 31 2e-21 MSNYALEIENLYFSYEDENILEDLSMKIEEGKFALIIGENGAGKTTLIRLILNQLKKDSG SIKIFSDPIEKSNHYQDLAYISQASVASFKLFPTNVKEVIENHLKFLKKSYDIDKLLEDF DLIKQKNHALSDLSGGQIQRLSLILAIIKDPKILILDEPTAAIDMKFSKDFYEHLKNLSK EGKTILMISHDYKLSSIFSDQIFHLSNKKIRKIDRARLREGLGDFYV >gi|325480692|gb|AEXN01000027.1| GENE 57 72255 - 73046 688 263 aa, chain + ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 255 1 255 268 147 38.0 3e-35 MSNIFEYDFMQRAFIAGALIAVILPCIGQLVLIKRLSMIGDTLSHSSLAGLSIGLCFGIS PILSAMLFCVFAAFSIEIIRNKLKNYQEVSTVIILAASIGIAGIMADLSASANAICSYLF GSIVTISDQEFYLLIALSLCFLIIYFTYYNDFYLLLFDPTSAQILGLRVKFLNFTISFLT AIAVAISAKTIGSLIVSSLLVIPSIMAIEICKSYKKSLILSIIFSLIFVFLGLFLSYIFN LRPGSVIVLIAVLSLILVLLIKK >gi|325480692|gb|AEXN01000027.1| GENE 58 73055 - 73162 128 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKNKKLLALVLATSFVLTSCFSQNKENIIDKKEKK >gi|325480692|gb|AEXN01000027.1| GENE 59 73915 - 75249 1680 444 aa, chain + ## HITS:1 COG:no KEGG:FMG_0026 NR:ns ## KEGG: FMG_0026 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 8 432 291 768 773 197 33.0 6e-49 MGQGKINRFDIVKILVHQDHYHIYDSNNREAITYTNPKNLFPNAYFGEYGNKSHKEVAEN NSSHVKPDENKKPHAKPEIKPDNNKKAQVKPEIKPDNNKKPQVKPEIKPDDNKKPQFKPE IKPDENEKPNANPKDDEKWPSGITKIIDHKDHWHLYRGNEEVGVVKENPKDIYPNAEYIV EKSESDNIAVADDEIFNYQDVRAELIKGVIPYLEGDLSKFTNYGNLSEEDAVYGSNGVRE NIFYWFHQNHYHAKTIKQIIQMEKDNKFGKYTAKDVVKTIKYKIENPQTQLEYKPEVNIE DVKEFLKNHYQVESYDILNIGDSLVQVFIKDETLNFYLRDFEMKDGKLSYKKQLPVVEDK KEENEENEENIKEDEIKEKSEDEKIENTKKTENKETNKIENKQTNKVENTKVEDTNNTEN KKDQTKPNQEEKEDKLKTENDIDK >gi|325480692|gb|AEXN01000027.1| GENE 60 75348 - 75464 101 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRFLRSLHSVEMGKFLVCQHTESCLGRILILGILIINA >gi|325480692|gb|AEXN01000027.1| GENE 61 75685 - 76404 569 239 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 1 210 1 204 270 133 35.0 3e-31 MVINRYIIFYFLFALLGWVWESIYCTSQSQKWQNRGFLYGPLCPIYGFGSIFALFAYDLV NKGSLEKLSIPQIFIVGFIVSMVLEYPTSYILEKLFHARWWDYSDVPLNLNGRTSVPTSI GFGLGAILVMDYLIPKAESFYYLLPEILIIILPFILIGIHSSDITLTVVNLTNFQKELDE IEENFQEKMTQRVDNFYKRKKSFNPKAIRRVVSFRMSKKRNQIAEKIIRGIERIEDQRK >gi|325480692|gb|AEXN01000027.1| GENE 62 76747 - 77403 656 218 aa, chain - ## HITS:1 COG:ECs4388 KEGG:ns NR:ns ## COG: ECs4388 COG1285 # Protein_GI_number: 15833642 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Escherichia coli O157:H7 # 10 192 5 191 215 133 42.0 2e-31 MENLRFIEILVARLFLSCFIGVMIGLEREFKGKFAGIRTHTIVALGSALAMIVSKYGFFD SSHYDAQRIAAQVVSGIGFLGGGLIFIKKDYISGLTTAAGIWTTAIIGMSIGAGMYAVGI TSSLVILLLQLFFNEDNGLFKFMKKPYTLDIVLDGPESIEKINKYLKSQNIKFVEKSINY KEDKLTLELQYHNKNEEELIGIIDFLRENKRVFKFSLD >gi|325480692|gb|AEXN01000027.1| GENE 63 77410 - 78756 756 448 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 446 3 442 456 295 37 5e-79 MENLELFLDKVNKILWGNWLVFVLLTLGIIYSIATNFVQVRHFKYIMHHTLVKSFKERNI EKREGSLSTFQAMMVTLAGNIGGGNVVGVATAIVAGGYGAIFWMWLAAFFGMALKYGEII LSQLYRGEDEDGNILSGPMYYIRDGLKAPALGVVIAVLMTIKMMGANLVQSNTIATILSD NFNFNSLLTGIILTILLFMIAVGGLKRLARVATSLVPIMSILYLVLCLLVIIVNIKNIPL VFKAIFEGAFSFKAAAGGAGGLVIARAMQYGIARGMYSNEAGEGTAPFAHGTAIVDHPVE EGITGVTEVFLDTIIICSLTAITIGVSQIPLDGESIQASSMAIHAIGTVYKPLSYLAMFA LLIFCFTTLMGQWFNAAKSFTYAYGEKFTEKVKYVYPFLCIVGCLGKISLVWTIQDIAMG LVIIPNILALLVLVKKVREQTKDFFENK >gi|325480692|gb|AEXN01000027.1| GENE 64 78765 - 79484 1016 239 aa, chain - ## HITS:1 COG:BS_yqiK KEGG:ns NR:ns ## COG: BS_yqiK COG0584 # Protein_GI_number: 16079474 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Bacillus subtilis # 4 232 5 236 239 162 37.0 4e-40 MLNFAHRGFKSKYPENTMLAFKKAYEAKADGIELDVHLSKDGELVIIHDENLLRTCGVDG LVKDFSLKELKKLNAAIGYEDLNEEIPTLREYFDFVKDTNLITNIEIKNGVIQYEGIEEK LYQMIKEYDLFDKVIISSFNHESVLRMKEIDKNLKYAFLEESVLVNPIKYLKENGISCFH PLINTIDENLLEEFSKEGIEVNAWLSSKLSYNLKDCLCMDLDGIISDFPDEVGELLKNK >gi|325480692|gb|AEXN01000027.1| GENE 65 79634 - 80554 1193 306 aa, chain - ## HITS:1 COG:no KEGG:Apre_1673 NR:ns ## KEGG: Apre_1673 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 304 1 305 305 378 62.0 1e-103 MTTSLVILAAGIGSRYGAGVKQLAKMDEYGHTIMDYSIYDAKKAGFDKVVFIIREEIEKD FKEILGKRIEKVIDVEYAFQKNELPKGHQVPKERKKPWGTVPAILSAKEFINEPFLIINA DDYYGREVFELMYKYLNNPENLNKDQIQIAMAGYKLKNTLSDNGSVNRGVCLENENHDLI SIKETHAIENKGGKIESEENRPAEFLNLESLVSMNVWASFPEFIQISERYFEKYLEKNKD NLMKAEYILADMVEELLEDKKARVKVIPTDDQWIGITYKEDLKPAQEEFKKMFEKGIYSP KLWEEK >gi|325480692|gb|AEXN01000027.1| GENE 66 80554 - 81576 1212 340 aa, chain - ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 4 338 3 336 339 440 62.0 1e-123 MKNIMITGGAGYIGSHIAVELLEKDFEVIIYDNLSNSSLESMKRVEKITNKKLKFYKADV LDGDKLREVLKNEKIDLVIHCAALKAVGESVKKPLEYYHNNLTGTLTLLSAMNDTGVKNI VFSSSATVYGDPNSCPITEDFPKGACTNPYGWSKSMMEQIMTDLYISDHEWKIILLRYFN PIGAHKSGLIGEDPKGIPNNLIPYITGVAVGKYDYVHVFGDDYDTEDGTGVRDYIHVVDL AKGHVKAIEAIDKLDGVEIFNLATGSGYSVLEMIRAFEKASGKKIAYKIENRREGDIAKC FASAKKAEEVLGWVCENGLDEMCEDSWRWQKNNPNGYEGE >gi|325480692|gb|AEXN01000027.1| GENE 67 81678 - 83330 2154 550 aa, chain + ## HITS:1 COG:L194050_1 KEGG:ns NR:ns ## COG: L194050_1 COG0446 # Protein_GI_number: 15672768 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Lactococcus lactis # 2 457 4 456 456 300 39.0 4e-81 MKIIIIGGVAAGATCATNIRKISDEDQIILLEKGRDTSFKNCEIPYYLSYMVEDREDLIA RKPDEFKKKNNIDARNFSEVIKINREEKFVEVKDLRENKSYKESYDKLVIATGASPFIPD SIKGLNKERENVFKVENVVDVENIRKYIKDHNAKKIIVNGAGFIGIESAENLKELDLDIS LVVRTRVLGNIDEELAGFVEENISKHINLIKNDEIVKVTDQKLIFKSGKEKSYDVLINAI GVKPNSKIAKEAGLKLTKSGAIETDRNLKTNDPDIYAIGDVIEVYNQLTKTKSKLNLAWP AHRQAKFVARHIKGLGQKSPSFIGSFALRSFDMNVASTGLSKKQLDGAKIPYKSTLITHN DSVNILPYSKPMNMKISFDPYTGKIYGFQAVGEGDVVKRVDIVASLIGMGADIYDLYDTE ISYQPIYSTPEDALNTLASQAIDVFEGKIKNIEIPQLQQRKDEFIIVDVREKEEFEKSHI KNAINIPVAKIDPDYFKNKNKYLIYCQSGRRAKTVVNNLQKEGLENIYYLEGSMNYLEKY QKTMGVDILE >gi|325480692|gb|AEXN01000027.1| GENE 68 83592 - 84941 1451 449 aa, chain - ## HITS:1 COG:CAC0460 KEGG:ns NR:ns ## COG: CAC0460 COG1253 # Protein_GI_number: 15893751 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Clostridium acetobutylicum # 13 433 14 435 443 256 35.0 5e-68 MDTEGPYWKLRIFLIVLALIFLNALINMIFSSLTSINHQKLRDMVENGDEKAKDVLKISQ DQQRLMQSQNFQDAVLSIITITYLLLNIKDSLAIFLNRESDFMQLVIMVFMVVLFVVFKR IFANMIPQRIGIRNPYTISKKTAGFAKFILFLTKPFVNIINKVTNLIMNIFGIESKAIEK EVTAEQIKSIVQVGEDQGVLRPLESKMINSIMEFDDVWAEEIMTARPEVFMIDIKDRDRK YLDEFIKLKHSRIPVYDEEVDNILGIIYTKDYLLEAIDVGIASVDIRKLIKPAFFVPEKI ETDKLFSQMQKDHTHMAILIDEYGGFSGIVTMEDLVEEIVGDMDDTFDKDLPDIRTSTKG SYIVKGSTSIKDLNDILGLDIDEENDQYDTVGGFIIDKLGFIPDDDCDQAVIYKNYEFKI LYIEETRIKIVRIKKINKSDQNLDENIKK >gi|325480692|gb|AEXN01000027.1| GENE 69 85037 - 85678 846 213 aa, chain - ## HITS:1 COG:FN1733 KEGG:ns NR:ns ## COG: FN1733 COG1394 # Protein_GI_number: 19705054 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Fusobacterium nucleatum # 1 212 1 209 211 217 62.0 1e-56 MARLNVTPTRMNLNTLKKRLATSKRGYKLLKDKQDELMRQFLEKIRENKRLREEVEADLK ESSKGFLMASSFMSPEFLQEAVSFPTQKIGVDIKVKNVMSVRIPQMEFKIDKGGNENASM YPYGLAQTSADLDLAIKGLNKVMDKLLALAELEKSTQLMADEIEGTRRRVNALEYRTIPD LEETIKYIRAKLEENERATISRLMKVKDIISEA >gi|325480692|gb|AEXN01000027.1| GENE 70 85682 - 87073 1974 463 aa, chain - ## HITS:1 COG:FN1734 KEGG:ns NR:ns ## COG: FN1734 COG1156 # Protein_GI_number: 19705055 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Fusobacterium nucleatum # 1 457 1 458 458 729 78.0 0 MLKEYKSVSEVVGPLMLVEDVSGVNFEELVDIELQTGERRRGRVIEVDENNAVVQLFEGS SGINLKSTSVRFLGRPLELGVSEDMIGRTFDGLGRPIDDGPSIIPDEKRDVNGIAINPVS RDYPSEFIQTGVSTIDGLNTLVRGQKLPIFSGSGLPHNKFAAQIARQAKVLNDSEDFAVV FAAIGITFEEAQFFRQDFEKTGALDRSVMFINLADDPAIERLSTPKMALTAAEYLAFEKG MQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTDLATLYERAGKLKGKPGTITQ IPILTMPENDITHPIPDLTGYITEGQIILSNELYNQGVQPPVSILPSLSRLKDKGIGEGK TREDHADTMNQIYAAYASGVDARELQKILGDSALSKADLAFAEFAKRFEEEYINQGFYTN RTIEDTLNLGWELLKIIPKSELKRIDDELIDKYLDKDENIKES >gi|325480692|gb|AEXN01000027.1| GENE 71 87073 - 88839 2581 588 aa, chain - ## HITS:1 COG:SPy0154 KEGG:ns NR:ns ## COG: SPy0154 COG1155 # Protein_GI_number: 15674362 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Streptococcus pyogenes M1 GAS # 1 585 1 589 591 740 62.0 0 MNKGKITKVSGPLVEAKGLSDANIYDVVEVSKDKLIGEIIEMRGDVANIQVYEETTGIGP GDEVVSTGSPLSVELGPGLLERMYDGIQRPLEKLELLAGEFLKRGVTAPPLNREKKWKFK AEKEVGDQVIPGDILGSVDETSVINHKIMVPNGVKGKVKEIKDGEFTVDQTVAVIETENG DKEVNMIQKWPVRTPRPFNRKLDPDTPLITGQRVIDTFFPVAKGGAASIPGPFGSGKTVI QHQIAKYADADVVIYVGCGERGNEMTDVLDEFPELIDPKTGESIMKRTVLIANTSNMPVA AREASVYTGITLAEYYRDMGYSVALMADSTSRWAEALREMSGRLEEMPGDEGFPAYLASR IADFYERSGKVIVNGQVEKEGSLSVIGAVSPPGGDLSEPVTQSTLRIVKVFWGLDYDLSY QRHFPAINWLNSYSLYQDKMDSYIDKTVDEKFSKNRMRAMSLLQQESSLQEIVRLIGRDG LSDDDKLKLDVTKSLREDFLQQNAFHETDAFCPMEKQDLMLDTILYFYDKSLEALSDGAN LDELEELEVKEKITRLKLIKDENLEEFDQVKKQIDKECKEAVAKGEDE >gi|325480692|gb|AEXN01000027.1| GENE 72 88853 - 89164 412 103 aa, chain - ## HITS:1 COG:FN1737 KEGG:ns NR:ns ## COG: FN1737 COG1436 # Protein_GI_number: 19705058 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Fusobacterium nucleatum # 1 102 4 105 105 105 53.0 2e-23 MYRVAVIGDKDSVLMFKALGVDVYTAVNGDMAKKLVNKLAKEDVGIIFITEDFAAKIQDT IDKYREEMTPAIILIPSNKEDLGLGMADINKSVEKAVGANILN >gi|325480692|gb|AEXN01000027.1| GENE 73 89157 - 90152 1144 331 aa, chain - ## HITS:1 COG:FN1738 KEGG:ns NR:ns ## COG: FN1738 COG1527 # Protein_GI_number: 19705059 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Fusobacterium nucleatum # 1 331 2 334 334 167 33.0 2e-41 MDREKFIRASITTRVYEKNLLTSENLKRIIDTDNLEEALSSLNDTKYGELIQKLERAEDY EKILSQMLLDSYKAMIKVSPDENLVHYLEEKYNFHNLKTLVKELIQDDDYSSIYIDIGKI DLVKIKRNLKEDLTDNDKYLSYAKKALDLYKENKDPQDIDLSLDKDFYEKLLEDSENLDY ESLINFTKERIDLTNLKTLLRIKGQGQSVDLLEKALIDGGNIDKNLFRDSLNADKNSYSN LFFKEKIYPQVKKSMEENDLNKAMQKLEKVIDNHLMDFAKESKKVSYGPEVIMGYLISRE MEIKNLRIILTAKLNSLSREFMEERLRDLYV >gi|325480692|gb|AEXN01000027.1| GENE 74 90163 - 90714 654 183 aa, chain - ## HITS:1 COG:FN1739 KEGG:ns NR:ns ## COG: FN1739 COG1390 # Protein_GI_number: 19705060 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit E # Organism: Fusobacterium nucleatum # 1 182 1 182 183 80 36.0 2e-15 MNNLDLLLDGIKDDGQKEADHILSNGQKRKEEIIKESEEKAQKEVSKIIENAQKEAKRIK ENSKVTADRQARDIKIGAKNQVVEDVLEKLVKKLEKLGPNSYKAFVLNRLKDSKIEKGEI LLQKDMKYHFKGEDFKGLKISDEFVEGGFVVRDGKISYDNTYKSLVNFEKDSLEKIIVDE IFK >gi|325480692|gb|AEXN01000027.1| GENE 75 90724 - 91191 825 155 aa, chain - ## HITS:1 COG:FN1740 KEGG:ns NR:ns ## COG: FN1740 COG0636 # Protein_GI_number: 19705061 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 7 155 10 158 160 144 60.0 7e-35 MVDFLVQNGGNIMGAVAVAIAVFLSGMGSAKGTGMTGEAAAGLTVEEPQKFGKALVLQLL PGTQGLYGFVIGFMILGKLGGDLNFQQGLYYIFAALPIGVVGYFSAVAQAKVAVSGMNIL AKNEDNFVQGIVYAVMVELYAILGFVISLLLVNNI >gi|325480692|gb|AEXN01000027.1| GENE 76 91184 - 93124 2260 646 aa, chain - ## HITS:1 COG:FN1741 KEGG:ns NR:ns ## COG: FN1741 COG1269 # Protein_GI_number: 19705062 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Fusobacterium nucleatum # 1 629 1 635 638 366 35.0 1e-101 MAIVKMDKFNLFSFENNRTSLLDILQKFNYVHFNDLKVDDGEDYLRKVKNQDRLTRIDEK RSKLEYAINSIEKFLDDDEKNSIEKKDMSLDLLYQEGNNFRFDEIYPLLKEQLDLREKSQ ERIKSLKASNEELEVFKDLDVDIKSIEDSHRFFVEVGSIADQFYKDFDTDFVKKDFKTAM VIDLNKKESLNYVIAISSLEEKDEFREFLRDHGFSKANIKTHKKVSEKIALNLEEIEKQE KNLKESEAKIKENKKFLPDFYLYQAYLDNLRRKEASSEYFLKTKRLDLVEGYIPHKLKDK FNSDLKEVLGDDFVLDLKEADKDDPDVPIILDNNKLIEPYESVVETYSLPKYNEVDPTLL VSIFYTIFTGFMLGDLGYGLILFIGTILLRKYKDLPESTDKMARLFTRVGLSGCVFGLIF GSFFGGIIPLPGLIDTQKDFNTLMVISLIIGGISLFTALGVKGYMEIRDGNPLGALFDVM LWYMAVGGAIALYLLDGSGKNIAKIIMIIGMVGIVLTGGRENKSIGGKAAGGLYSLYGMS SWIGDFVSFLRLMALVLSGGFVAYSVNLIVGMLWPAGILGKIGAVIVFVIFQLFNLFLST LSAYVHSLRLVYVEMFNKFYEGGGKKFRQMIENSKFINIITGGYNG >gi|325480692|gb|AEXN01000027.1| GENE 77 93111 - 93434 548 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848543|ref|ZP_08170203.1| ## NR: gi|325848543|ref|ZP_08170203.1| putative ATP synthase archaeal, H subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative ATP synthase archaeal, H subunit [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 107 1 107 107 109 100.0 6e-23 MASDVINQVKDAEIAADKLVDDAKKSAKEMIESAKAEASKAYKEKIEKAKKDGQNLIDKA KKEAEDEKMPLIQKAKDESQDILKQDEGKIDSLLTSLTERIVNNGDS >gi|325480692|gb|AEXN01000027.1| GENE 78 93691 - 93954 67 87 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848523|ref|ZP_08170183.1| ## NR: gi|325848523|ref|ZP_08170183.1| hypothetical protein HMPREF9246_1970 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1970 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 87 1 87 87 65 100.0 1e-09 MQAFNNSNNLKNSKKFFYLFLLTYLMVSLIHLLIRNFFLSNISCIFLGIISLFFLSKAKL IPKKSQFILKAILIIFIFIAFLSLFLV >gi|325480692|gb|AEXN01000027.1| GENE 79 93940 - 94902 1308 320 aa, chain - ## HITS:1 COG:CAC1088 KEGG:ns NR:ns ## COG: CAC1088 COG1494 # Protein_GI_number: 15894373 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins # Organism: Clostridium acetobutylicum # 2 315 3 318 324 316 52.0 3e-86 MNRDLGINLCRVTEAAALASGKYLGKGKKNDSDNIAVDQMRAMFNYLGINGRVVIGEGEI DEAPMLYIGEEIGRMDQDDLVDIAVDPIDGTASLANGTINSISVIAVAPEGCLLNAPDVY MNKIATGSRAKGVIDINKSTKENIENVAKALNKKVSDITVSVLNRPRHEKLIEEIRDAGA RISMVEDGDVLTAIATELSDGKIDLIMGIGGAPEGVIAAAALKCLGGDFQGVFAPSDSKQ VKRCLKMGVDFDKVYTIDDLVKGDDVLFAATGITDSSFLKGVSYMKNNMAKTQSLLLRLP SGTIRFIDSVHKLDQKLDQK >gi|325480692|gb|AEXN01000027.1| GENE 80 95043 - 96257 1123 404 aa, chain + ## HITS:1 COG:no KEGG:Apre_1693 NR:ns ## KEGG: Apre_1693 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 37 401 22 382 386 143 26.0 2e-32 MKKFLIFLFILIFSSCTKNEGKINSNNTSIKDNKISSSSNENKKEKRLVYKHDNMEGFVR DDSIVIDRMLGDYPNDVSSDPKDPYTKDELENLDYDKNISLSAFNIRIPKRCMVFSKDEG YVIDFPKNDQYDIEINVKKLFEDGEKSEAEIKDELYTIADKETYNSSIKNANVVQKPILL ESDYKKISYSIIEDSKFSYTNIFMATPTNILEFQIVEDKEKSSSSPYIMTDLLSTTYPES EDVDMVAKSFKNFEKNIDLYATEKVDMGEFSLNLPANMKNVQDSESLTLYESQVSGKTVN QVLISKIKKDKDLDLAKSFALSQGSKIPPAFISPMGEVKEEMVHDKLFMKSKVRIYTEQF TKEGEKIAFETENYYVNIILTGPLKNTNKTRLLNDNIINSLKFE >gi|325480692|gb|AEXN01000027.1| GENE 81 96659 - 97444 607 261 aa, chain + ## HITS:1 COG:AGpT116 KEGG:ns NR:ns ## COG: AGpT116 COG0600 # Protein_GI_number: 16119871 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 19 238 74 293 313 139 31.0 5e-33 MKKFSFTYKLWKNFLVFFAILIIWQIIYKMGIFSPIYLPGPYKVFQTFLAMVYDGSIFEN ILASLYRVLVGYFLAFILSFILALIFYLKADIFPYFSNILDFLKNIPPLGLVPLLILWVG IGEFSKISIVFMASFFPIFLNIQKGFMEADKDMVEMGRAFSYNDREIFTKIVLPSSLKDI FVGARIGLGYAYRSIIAAEMLAASKGLGYLINFSRLMSRTDKVIVGILVIGFIGMVSDKI FVKFASLFLKGDLKNDWYKSI >gi|325480692|gb|AEXN01000027.1| GENE 82 97422 - 98108 223 228 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 206 2 225 245 90 30 3e-17 MTGINLSNLSKIYEIDDKKIKALDNLSLNLDIKKRNVLIGPSGCGKSTLLRIIGGLLEID QGEILKNKVKTSFVFQNPRLLAWKNIEENIKFSNDDPKLCQKWIKIMGLEGFEKAYPSQL SRGMKARVSLARALIFPNDFMLLDEPFAALDEITKEKLEVELINYMKIKKSGFLFVSHDL EEALNVGQRLIIMKKGKIVSDFDLEDKKISKEILRNKFKKIIGEENEK >gi|325480692|gb|AEXN01000027.1| GENE 83 98098 - 99090 1491 330 aa, chain + ## HITS:1 COG:AGpT119 KEGG:ns NR:ns ## COG: AGpT119 COG0715 # Protein_GI_number: 16119873 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 69 326 52 310 320 110 28.0 4e-24 MKNKLLKILSLFTLVFAITACSNKDNKENNSNENISNQTSQSNEKLSIDELNITYVTAPL NVPSIIEKNKEIFKKHLPGVKINYKEITSGADQTAALASGDVDVLYALGGSSAILAKANG QDIKVLNMYSRAPKAFSLFSKDDSIKNPSDLKGKKIGGPAGTNLHQELLAYLEKDKMSEK DVEFSNMSIPDAAAALDSGNLDVALLGGPAAYKAKEAGLHEITNGENLIDAIICVASSEK FAKDHPDVIKALNDAQAEISKFMIENKDQTKEIVKKELDLDDKAYDYMFPMYDFSTKITD KDKKGFERTKKFMLDNKMIEKDFDINLLFE >gi|325480692|gb|AEXN01000027.1| GENE 84 99218 - 99724 653 168 aa, chain + ## HITS:1 COG:CAC1766 KEGG:ns NR:ns ## COG: CAC1766 COG1595 # Protein_GI_number: 15895043 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Clostridium acetobutylicum # 3 168 5 179 185 58 26.0 5e-09 MDDKNLINGIKNKDEKYLIEFINLYGPILKGVIVKTIGNRRNILDEILNDALLGIWDNIN SYDPNRSSFKNWCAGVAKYKAIDAIRKEVKHDCLDLDDISGFIYDKNLENFDESEKILEI LPKKDREIFKKLFIEGYSYDDLEKITDIPKDRLYNKVSRAKKTLRSKL >gi|325480692|gb|AEXN01000027.1| GENE 85 99721 - 100710 1144 329 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848475|ref|ZP_08170135.1| ## NR: gi|325848475|ref|ZP_08170135.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 329 1 329 329 513 100.0 1e-144 MKNIYDKINDMDFEIEKIELDDFEKEKLIKTAKSYKKNKKSKKILPIAAALILVAGLNIP VVKAEVTKFTTDIKVTMMQAFGASPDSYKYIAEINKPVTVGEDSFVIGNIAFEDNKIFIN TLRNGENFKENTKNNSYLYKVVVDGKTYKAMGSSGGEGLLEDKKTSSENLMINFDKSFPK KDKANVDLYFADKNKSQIISIESPMNTINKDNKIFAENLKIKGTNATISLMKINPMTLTA TIKNLDQAYVYELKGVDEKGNKISLDERVADENSTTFIYNKDFSDLSLDEIKDGRKINFT LSRSKINENSGKESDGNFEKITEFSLSAK >gi|325480692|gb|AEXN01000027.1| GENE 86 100775 - 101461 495 228 aa, chain - ## HITS:1 COG:TP0572_1 KEGG:ns NR:ns ## COG: TP0572_1 COG2717 # Protein_GI_number: 15639561 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Treponema pallidum # 68 227 66 228 270 96 36.0 3e-20 MTLITGILFTIIFYGLTAKFIKKRPVIFYVGVYVWTCFVVYYYNMGYDRNLPLWFNEYFM KIFSRGIFATATFMIVMYLGTITKHNDFSKKLMAIRGEISIIASILVFSHNIIFGLHYFP ILFTNPSSMPTRQLIASIITIFLLLMLIPLFVTSFKTVRRKMKAKSWKNLQKMAYPFFIG IYIHVMVLYSANVKDNMLGIVLYTIIYASYIVLRLRKRNMKIQKASAK >gi|325480692|gb|AEXN01000027.1| GENE 87 101488 - 105354 4977 1288 aa, chain - ## HITS:1 COG:CAC2762_2 KEGG:ns NR:ns ## COG: CAC2762_2 COG3976 # Protein_GI_number: 15896018 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 22 123 29 131 132 70 40.0 2e-11 IPDKKPEEKPNKKPGKEKDKKPEEKPNENPLKPDPSKTYKDGIYEGISEGFNGPIKVRVT ISKASITKVEILSHNEDSPYFAKAKSVITKILGKPGKSVDTVSGATFSSGGIIDAVNDAV SKAGGETIPPIPDKKPDVKPEENPGKKPEDKPGKKPEENIDDALKKYYNNQPLKDGEYTG WGIGYINTKKTRTYIRVENGEISEIKVGLNSEYGDDMGPFRKKAEKILSFLKGKEARLNI AKMGLYREYFETIRNSKNPKEKVADLFGKEYLNHLKGFRGDNSESDLTLLSRTVKAYMSN RYGSKDLFDSISGATVSASGISAATREAAEKSSNDYKTNTDVKEISIISPKNKNIEVNKG EGVDFSELRVKITKKDGSSKELGWKDFQANGISIKDSDGKTIENGNDLKKYGDTRIIKAK VVHEKSLSYDDFRILVGKYSKDYIIGLEYSADGKKWYKIDKVEMDYADSRNIASHQRVDA PKSFEFEKVKIRLVSKKGNRYEYVTDKLPVNRQVQYKLLEGDNPNLPKIIYAKFELSGKE SDKHLVEEKENGQKEKEKPQRKEEIEVDQKVIDTSLMESNGQKWIEGQPIRPATVTSLDP EAKIVGEIEGLPKGLTFDGKTITGTIDPIDKGWPEDGSGFKTIKLKFKAEKGDKLLVRTI EYWLYRDKDRDGISDDDDIDQGEKFTPLRANTQAIIVNGKAPSLEEYKAKFSNIPKDGSV EVSFKKEPDYSKVSERPQRVYLQFKAKNAKEVGEAYVMVVVKKAAENEKPQRKEEIEVDQ KVIDTSLMESNGQQWIEGKEILPATVTSLDPEAKIVGEIEGLPKGLIFDGKTITGTPEKS DKGWPEDGSGIKTLTLKFKAEKGDKLLVRKITYWLYRDKDRDGLADSDEKDLGEKFTPQR SNSQAIIVDGKVPSLEDYKAKFSNIPKDGSVEVSFKKQPDYEKVSERPQRVYLQFKAKNT KEVGEAYVMVVVKKAAKNEKPQTKEEIEVDQKVIDTSLMESNGQKWVEGQPIRPATVTSL LDGANILPEIEGLPKGLKFDGKTISGTPERSDEGWSADGSSFKTIKLKFKAEKGDKILVR TVEYWLYRDKDRDGISDDEDIDQGEKFTPISSNRQPIIVEGKAPSLEDYKAKFSNIPKDG SVEVSFKKELDYSKVSERPQRVYLQFKSKYSKQVGEAYVMVIVKKAVKKENQEVRSLNQK AKKKKEEIKENSIKKTKEKNSNSQPVDNKKDNKNESNDKSNNKELEESEKESNLGNTQNP ENSHLPPLEIKKESPVIEDENDSDKKVQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:51:48 2011 Seq name: gi|325480673|gb|AEXN01000028.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00023, whole genome shotgun sequence Length of sequence - 17114 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 12, operones - 6 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 19 - 957 1266 ## COG0039 Malate/lactate dehydrogenases - Prom 979 - 1038 5.5 2 1 Op 2 . - CDS 1044 - 1571 574 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 1611 - 1642 1.7 3 2 Op 1 . - CDS 1660 - 2457 886 ## COG2116 Formate/nitrite family of transporters 4 2 Op 2 . - CDS 2513 - 2776 211 ## Apre_0577 hypothetical protein 5 2 Op 3 . - CDS 2766 - 3653 954 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 3676 - 3735 14.2 - Term 3722 - 3759 3.3 6 3 Op 1 9/0.000 - CDS 3772 - 4623 1130 ## COG0685 5,10-methylenetetrahydrofolate reductase 7 3 Op 2 . - CDS 4607 - 6874 2464 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 6924 - 6983 7.9 - Term 6889 - 6951 4.6 8 4 Op 1 . - CDS 7004 - 7915 849 ## COG0583 Transcriptional regulator 9 4 Op 2 . - CDS 7937 - 9127 1421 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 9185 - 9244 3.7 10 5 Tu 1 . - CDS 9270 - 9956 623 ## COG0491 Zn-dependent hydrolases, including glyoxylases - Prom 9985 - 10044 6.0 - Term 10042 - 10083 -0.3 11 6 Op 1 9/0.000 - CDS 10198 - 11097 1329 ## COG1760 L-serine deaminase 12 6 Op 2 . - CDS 11097 - 11762 778 ## COG1760 L-serine deaminase - Prom 11815 - 11874 6.2 13 7 Tu 1 . - CDS 11886 - 12617 147 ## COG5522 Predicted integral membrane protein - Prom 12846 - 12905 8.1 14 8 Tu 1 . + CDS 12748 - 13305 355 ## gi|325848602|ref|ZP_08170218.1| hypothetical protein HMPREF9246_0875 + Term 13315 - 13358 0.6 - Term 13298 - 13350 9.3 15 9 Tu 1 . - CDS 13351 - 14298 882 ## Apre_0567 hypothetical protein - Prom 14325 - 14384 9.0 + Prom 14271 - 14330 15.0 16 10 Op 1 . + CDS 14453 - 15337 1085 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component 17 10 Op 2 . + CDS 15318 - 15461 89 ## FMG_1364 putative potassium channel protein - Term 15318 - 15361 -0.4 18 11 Tu 1 . - CDS 15488 - 16267 448 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 16491 - 16550 13.7 - Term 16528 - 16594 10.0 19 12 Tu 1 . - CDS 16609 - 17112 666 ## Apre_0739 YSIRK gram-positive signal peptide Predicted protein(s) >gi|325480673|gb|AEXN01000028.1| GENE 1 19 - 957 1266 312 aa, chain - ## HITS:1 COG:SPy1151 KEGG:ns NR:ns ## COG: SPy1151 COG0039 # Protein_GI_number: 15675128 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Streptococcus pyogenes M1 GAS # 5 310 9 315 327 378 59.0 1e-105 MKDSKVILVGDGAVGSSFAYASTILGIGRELGIIDINEKKAEGDAMDLSDVLSFTNPKQI YKADYSDCKDAEVVVITAGIPQKSGESRLDLIEKNLKIFKDMIGQIVDSGFDGIFLVASN PVDILTYATWKYSNFPANKVIGTGTTLDSSRFKKEIANLIGIDPRSVEAFIMGEHGDSEF AVWSHTNVGGMPLYEWVKMHSETDEKELLDTFDKVKNAAYEIIDKKGATFYGIGMALARI VEAIINDQNSVFSTSSYLDGEYGLNDIYIGVPSVIGKDGVKWVLEVPLTDTENERMQASA KTLKDIIDKSNL >gi|325480673|gb|AEXN01000028.1| GENE 2 1044 - 1571 574 175 aa, chain - ## HITS:1 COG:lin0387 KEGG:ns NR:ns ## COG: lin0387 COG0494 # Protein_GI_number: 16799464 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 1 171 1 167 169 123 42.0 2e-28 MKEYVDLYDNFRNKTGKVIERRDIVPKGLFRLIIHVLIFDKKGRLLIQKRTKSKRSWPNR WDLTVSGAVSSGETSQISASRELFEELGIKYDFSNSYPNISINTGFRIDDVYIIKNKDIN LKKLKLQEEEVSDAKFVNLKQLLEIIDRGEFVPYQKDYINLLFYLRDNTNLFENY >gi|325480673|gb|AEXN01000028.1| GENE 3 1660 - 2457 886 265 aa, chain - ## HITS:1 COG:SP1215 KEGG:ns NR:ns ## COG: SP1215 COG2116 # Protein_GI_number: 15901077 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Streptococcus pneumoniae TIGR4 # 4 265 2 265 265 197 44.0 1e-50 MENINSNFNKKVKAACNKKEDLFDSSILKYIFRSALAGIFLTLTTLAGLIAADHLSGLSP VMAKPAFAGIFAIGLCYVLFLNAELATGNMMFLTAGVYNKYISLKKAIIILLVCTLGNLI GAYLVSFVTSLTSAINAFDANSFLTSLVSAKLDKTSMDILFAGLLANVFVNLAVLSFVLV ENQAFKGFLIMSAVFMFVYIGLEHVVANFGLFSLVQFSGNMKENFTLANVLRQWIFAFLG NYLGGGICIGLLYAWLNDTKSKFVD >gi|325480673|gb|AEXN01000028.1| GENE 4 2513 - 2776 211 87 aa, chain - ## HITS:1 COG:no KEGG:Apre_0577 NR:ns ## KEGG: Apre_0577 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 84 6 85 91 77 62.0 2e-13 MKIKIIYFIIISIISLILTIYDKIASKKFKRNRIRENVLLFFAFIGGSLSMYITMRLIKH KTRHKKFMISLPIIIICHLFIIFYIFR >gi|325480673|gb|AEXN01000028.1| GENE 5 2766 - 3653 954 295 aa, chain - ## HITS:1 COG:MT2788 KEGG:ns NR:ns ## COG: MT2788 COG0596 # Protein_GI_number: 15842253 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 10 288 25 290 341 79 28.0 9e-15 MKIEKVKLENGETMAYRHVGHGENKVILIHGFQSSSQFFEDLLESLDENIEVFAPDLIGY GESSYVNKHKEMADWAKDLKYFSQKLNLENFSLAGWSLGGHVAMDFAGLYPDLIKNLILI ASVGVKGFIMPKDKQAKDDDSKLKLPNFLKNFNIKHDHSFTVPILNGIKDKDIDFFEDLF RQTIYNVNDPNPDDLRKMAEDFLKQRCFLESLLAMVTYNNTNKGGSGLIEKIDKKVTWIH GDKDMVVPIDDAIESIGYFPNKVDFIKFDNSGHAIFVDEKEKFIKIFEDLVKNEN >gi|325480673|gb|AEXN01000028.1| GENE 6 3772 - 4623 1130 283 aa, chain - ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 8 282 2 277 282 279 52.0 5e-75 MNIGSKDCVLSFEVFPPRKNLPIESIYNTIDRLIDLKPESISVTYGAAGNDTSKRTFELA GQIKKHGVESVAHLISIGLSEDELTRKLKILKEKNVNKILALRGDIPKFSYEKGDFDHAS DLIRSIKEKGDFYVMAAAYPEGHIDSHNLVEDIKNLRKKVDAGCDSLVTQLFFDNEDFYR FRDMCDLAGIDVPIQAGIMPVINKKQIEKMISLNGIKLPKKFLKIMKRYEDDKIAMRDCG IAYAVDQIVDLISSGVEGIHLYTMNNPYIAEKIHESIKNLIKL >gi|325480673|gb|AEXN01000028.1| GENE 7 4607 - 6874 2464 755 aa, chain - ## HITS:1 COG:Cj1201 KEGG:ns NR:ns ## COG: Cj1201 COG0620 # Protein_GI_number: 15792525 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Campylobacter jejuni # 1 752 1 753 754 873 59.0 0 MKTSIIGFPRIGENRELKFATEKYFRNEIKFSELENVGKEIRKNAWQNQKDLDYIVSNDF SYYDLFLDTAFTFNVIAKRYRQLNLSAIDTYFAMARGYQKDGLDVKALSMKKWFNTNYHY MVAEIEDDTEIKLNSTKAFDQYKEAKNLGFETKSTIVGIFTFLKLLDYKGEKNINDFKDD FVNAYISYIEKFQELGLKTLQFEEAYLVYDLSKEDIDLFKEVYQKILAKKGSIKIILQTY FGDVRDIYQQLQELDFDGIGLDFVEGRKTLDLIEKYGFVKGKTLFAGLINGKNIWRNSYE KTLGIIEKLKEKEIDFVIQASSSLIHVPYRVDFEDELDEKYKKHFAFAYEKLEELNDLKK LADLDYKEDQNFIKNKKLFEDRKNLCDRDVKERIENLKDSDFIRSDSFEKREEIQKEELN LPLFPTTTIGSFPQTLDVKRNRKRYKNGQISKEEYEEFNYKKIEECIRLQEDLGLDVLVH GEYERNDMVEYFGEHLSGYLFTKKAWVQSYGTRCVKPPIIWSDIKREEEITVKWSSYAKS LTKKPIKGMLTGPVTILNWSFPREDISVKESTYQIALAIRDEVLELEKSGINIIQIDEAA LREKLPLRKSDWFSQYLDWAIPAFRLVHSACKVNTQIHTHMCYSEFTDIIKSIDQMDADV ISFEASRSNLEILDSLKENNFRTQVGPGVYDIHSPRVPSVEEIENTLRKILEKVDYKKLW VNPDCGLKTRGEEETVKALHNLVRASKELRDEYRK >gi|325480673|gb|AEXN01000028.1| GENE 8 7004 - 7915 849 303 aa, chain - ## HITS:1 COG:SP0676 KEGG:ns NR:ns ## COG: SP0676 COG0583 # Protein_GI_number: 15900577 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 299 21 319 322 290 49.0 3e-78 MTLQQLRYLIAIAEEGSISKASQALLVSQPSLSKSIFDLEKEMGIKIFTRNNRGVNLTEE GEIFLAYSRSVVEQADFLENNYKKKEVLKRVFSISSQHYAFVVNAFVMLVKKYGEEKYEF SLRETTTSQIIEDVKTLRSQIGIIYLSNFNRNIILGILEREDLEFHSIFKASSHIFICKD NPLAKKDVISLDDLKKYPRLSYEQDNYNSFYFSEELFPTEYSPKNIVVTDRASIFNLMIG LNGYTITSGVLSEDLNGTGIIAKKLDANEEMDIGYISLKDRPLDFISQSYIKYLKEYIEN FSK >gi|325480673|gb|AEXN01000028.1| GENE 9 7937 - 9127 1421 396 aa, chain - ## HITS:1 COG:MTH760 KEGG:ns NR:ns ## COG: MTH760 COG0025 # Protein_GI_number: 15678785 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Methanothermobacter thermautotrophicus # 4 387 7 385 399 256 43.0 5e-68 MLISLGLIIIIGLILGFICKKIKIPALIGMLFTGIILGPHVLNLIDPKTLSISAELRQIA LIIILIKAGLSLDISDLKKAGKSAVLLSFLPASFEILGYFIFARIFFKISTIDALLMGSV LAAVSPAVVVPRMVKLIEEKRGVEKSIPQMILAGASCDDIFVLVLFSSFLSMAKGEDVSL ISLLNVPVSIVLGILFGSIVGFILYYIFEYFYKKDLLIRNSTKVIVILAISFLLVAMENL LKNRIAFSGLLAVIAMSCVFKIKAKDEVSSRLSEKFGKLWIFAEILLFVLVGAEVNISYI SNLGLMAVILVFLALIFRSVGTIISISGSNLNKKEKLFTVFSYMPKATVQAAIGAVPLAN GLSSGDIILSMAVLGILITAPIGAIFIDNFYKKLLA >gi|325480673|gb|AEXN01000028.1| GENE 10 9270 - 9956 623 228 aa, chain - ## HITS:1 COG:PM0685 KEGG:ns NR:ns ## COG: PM0685 COG0491 # Protein_GI_number: 15602550 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Pasteurella multocida # 6 228 5 231 233 179 39.0 4e-45 MKINFIRAFEDNYIWTIEKGKNVILIDPGEAYPCFKYLEDKNLYAILLTHKHMDHVGGVR ELKEKFKDVIVYGPSETENLNDKTLKDSDEFELLGYIFKVLKTNGHTEEHISYLVENKLF CGDTIFSSGCGRVFTGDYKSSFESVQKIKNLDKNTLIYPAHEYTVDCLRSSKKIIKDKIM DEAIDEAKEKISNGLPSLPTSVEKEFLINPFFMAKDLDEFKEFIRIKN >gi|325480673|gb|AEXN01000028.1| GENE 11 10198 - 11097 1329 299 aa, chain - ## HITS:1 COG:CAC0674 KEGG:ns NR:ns ## COG: CAC0674 COG1760 # Protein_GI_number: 15893962 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 1 286 1 287 290 228 45.0 9e-60 MFRKAGEVIEECQRRNLHIKDLVLEEELKSSQINKDDILFNLRQMFKVMEESATGNLNHE TKTAMGMIDGFAKKMNTYSQNGKSITGSFITEAMAMAFSTLEISAAMGEIVASPTAGSSG ILPAILYSLKKREGFSDEKMVNAMLTAIGIGKIIGFYGSFAGAEGGCQAETGSGAAMGAA AACYLYDQSPEVCFHAASFAFLHVLGLVCDPIAGLVEYPCTFRNASGVVNAFISADMAMA GITSIVPFDEVCKAAGDVGATLPESLRETGIGGIAGTETGRKIRKKFFSLGNDATKENK >gi|325480673|gb|AEXN01000028.1| GENE 12 11097 - 11762 778 221 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 1 205 1 208 227 192 46.0 5e-49 MKEYGVFDIIGPIMIGPSSSHTAGAARIGQVAISIVKDGFTRVDFHLHGSFAQTYKGHGT DKALLAGVLGFRPNDKRLRDSFQIADERGLEYHFIKDDLGTVHPNTAKIVFYYPDGTTSS VTGSSIGGGNIEIIEINDVAISYNGKFPTIILRYREQKGVIYKVSKLLATNDYNIESMKT VKSDDEVTLIVELNEKLEKSIIEQIINDDRYDYANYIEGVR >gi|325480673|gb|AEXN01000028.1| GENE 13 11886 - 12617 147 243 aa, chain - ## HITS:1 COG:BS_ywaF KEGG:ns NR:ns ## COG: BS_ywaF COG5522 # Protein_GI_number: 16080895 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus subtilis # 18 220 14 215 237 67 23.0 3e-11 MKEFIEVFFRKKEDGFVFNSYGLLHLFLFTFMIFLGYLIYRYREKIRENKKLYKGVRNSF LFLLAFQQLSFLFFLSFVRHDTIQEALPLYTCRISIYSGFFALLKNNDNLKILTIFWGLI GGIIGLIYPDLMAYSWPHIMYVNFFLTHYLVFWTSLFFLFVDEVVIKKENLKFMFYFVNI FLLITEIVNLKFNLNYAYLSYSPIFKSRLEILPGFIYFILLVILYNFSIVLNYYILKKLK LAD >gi|325480673|gb|AEXN01000028.1| GENE 14 12748 - 13305 355 185 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848602|ref|ZP_08170218.1| ## NR: gi|325848602|ref|ZP_08170218.1| hypothetical protein HMPREF9246_0875 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0875 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 185 1 185 185 202 100.0 7e-51 MRNTNFKIRSMSIILCLIFKFIVLGLSFIFLGRFSSLIKSFSDLEKINLKTLPNSLSSIV NVYYLILLFLILSLILFSISLIFNKSFKALEIVEIGANVLSLIFYVISFILIKPALSLFK NILNGFKGLDTLEYFSYIKKFLYNANFLVDKIDGPIKIFFTIFTILAIIMMIISIILMVK RLIRK >gi|325480673|gb|AEXN01000028.1| GENE 15 13351 - 14298 882 315 aa, chain - ## HITS:1 COG:no KEGG:Apre_0567 NR:ns ## KEGG: Apre_0567 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 60 311 63 304 309 159 40.0 1e-37 MKNKLRYLFIIFLIIIVAIFIINSTNKNIKKNNKRIIIDEKNSNNYVKNNKKEKDDKVGK DKILSEKIEEIIDQECGNLEGDWQVAVDSLSGDFDISIYKSSNSKIESLPSASTIKIFLA LEAYRQVEEGILDEKNVENDIYLMLKDSNNESANRLIDLIGNYDMEVSSQKINDTIKKIT GENKTGLYRKMLHEGKENMASARDLNMALGDIYFGKFVNKDHSNKIMEAMAENNTTSKFK LLGNLPKDAKGYSKSGEIPDKGVENDIAIISIGDKVFAISFLSQYPNPVSHGQGPQFTCM QNLGKKISEAFLQCN >gi|325480673|gb|AEXN01000028.1| GENE 16 14453 - 15337 1085 294 aa, chain + ## HITS:1 COG:MJ1357 KEGG:ns NR:ns ## COG: MJ1357 COG1226 # Protein_GI_number: 15669547 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Methanococcus jannaschii # 1 293 1 300 343 172 38.0 9e-43 MEEKRKLKFIFYAFVLLLIIGIIGYMKLLEIDFVDALYMTVITISTVGFTELGKTSNKSE IFSVIMIFLGVGIVGYAFTTVVAMLVEGKFLDLWKGNKMERKIAALNNHYIICGSGELAE VIINKFIDEKLDFVVITDKHEDLDDYSHHNILVIEGHSTEEEILEKAGVTKAKGLISTLD SEVDNIVTVLTARNLNKKIYIIANSITKAGSKKLLKVGANKTLSAVEISGKRMASLMIKP NIISFLDVATRIGDVELDLEEVIIKKDSYLENKTILQAQIPQKTGLIVLAIKKI >gi|325480673|gb|AEXN01000028.1| GENE 17 15318 - 15461 89 47 aa, chain + ## HITS:1 COG:no KEGG:FMG_1364 NR:ns ## KEGG: FMG_1364 # Name: not_defined # Def: putative potassium channel protein # Organism: F.magna # Pathway: not_defined # 4 47 292 335 335 71 77.0 9e-12 MQSKKFEDKEMIFNPPVDYTFKIGDVLIVLGREEQVDKLKYLGDELK >gi|325480673|gb|AEXN01000028.1| GENE 18 15488 - 16267 448 259 aa, chain - ## HITS:1 COG:BS_ybdG KEGG:ns NR:ns ## COG: BS_ybdG COG0596 # Protein_GI_number: 16077268 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Bacillus subtilis # 1 229 55 287 296 63 23.0 4e-10 MNVVEKGFENNKIIILSPGYGTIGPGLDFLPLIDNLFKDFHVVAIEPFGYGDSDISGRSR SVENITSELHEAIKILGFRKYILCSHSISGIYSLYYLNKYKDEVIGFIGMDTSVPNQLKY TGNIFFPNLRKWANKLGFIRLISLFKSDFFIASNNYYSKEIKNQLSYRLYRDFANEDNLN EGINFEKNWKRIKNLIYPENIKKIFILVKKEKGKKDWRYIETKNSFLNKNGKIYLLEGSH YIFRDKFMEISKIIRDEFL >gi|325480673|gb|AEXN01000028.1| GENE 19 16609 - 17112 666 167 aa, chain - ## HITS:1 COG:no KEGG:Apre_0739 NR:ns ## KEGG: Apre_0739 # Name: not_defined # Def: YSIRK gram-positive signal peptide # Organism: A.prevotii # Pathway: not_defined # 1 167 1815 2035 2035 137 50.0 1e-31 GETEYAAGAEITIDKDTTVTAIWEDITTDPSTPDPGTNPGEGDNPNNPDQGGDKPNPGTR PGEGDNPDNPGTRPGEGDNPDKPGENSRPRTKPNGGENISKQKPDEDKITKKPEDNKENS LNNRKVQVTRTKDVKENVQTGVESLGKIGGILSAAIAGLFASKKRKK Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:52:15 2011 Seq name: gi|325480672|gb|AEXN01000029.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00059, whole genome shotgun sequence Length of sequence - 1478 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 65 168 ## - SSU_RRNA 61 - 1478 99.0 # AY958786 [D:1..1477] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. Predicted protein(s) >gi|325480672|gb|AEXN01000029.1| GENE 1 3 - 65 168 20 aa, chain + ## HITS:0 COG:no KEGG:no NR:no KSAYRLFTLRKEVIQPHLAS Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:52:26 2011 Seq name: gi|325480650|gb|AEXN01000030.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00014, whole genome shotgun sequence Length of sequence - 22978 bp Number of predicted genes - 21, with homology - 21 Number of transcription units - 9, operones - 4 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 404 - 437 2.0 1 1 Tu 1 . - CDS 541 - 2604 2120 ## COG3968 Uncharacterized protein related to glutamine synthetase - Prom 2640 - 2699 14.1 + Prom 2640 - 2699 11.3 2 2 Tu 1 . + CDS 2796 - 3860 1331 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 3868 - 3906 2.3 + Prom 3871 - 3930 12.6 3 3 Tu 1 . + CDS 3978 - 5249 1910 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase + Term 5302 - 5338 1.0 - Term 5243 - 5274 2.1 4 4 Tu 1 . - CDS 5339 - 6055 686 ## COG1943 Transposase and inactivated derivatives - Prom 6081 - 6140 9.7 - Term 6193 - 6229 4.4 5 5 Op 1 . - CDS 6230 - 7210 1361 ## COG4086 Predicted secreted protein 6 5 Op 2 . - CDS 7228 - 8016 1055 ## COG0489 ATPases involved in chromosome partitioning - Prom 8126 - 8185 9.2 + Prom 8485 - 8544 6.2 7 6 Op 1 16/0.000 + CDS 8565 - 10127 1947 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 8 6 Op 2 . + CDS 10120 - 10854 279 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 10857 - 10883 0.3 9 6 Op 3 . + CDS 10921 - 11427 621 ## gi|325848660|ref|ZP_08170238.1| hypothetical protein HMPREF9246_0416 10 7 Op 1 6/0.000 - CDS 11787 - 12398 690 ## COG0352 Thiamine monophosphate synthase 11 7 Op 2 1/0.333 - CDS 12395 - 13216 958 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 12 7 Op 3 . - CDS 13185 - 13730 501 ## COG4732 Predicted membrane protein 13 7 Op 4 5/0.000 - CDS 13739 - 14893 1349 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes 14 7 Op 5 5/0.000 - CDS 14895 - 15659 1153 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 15 7 Op 6 . - CDS 15649 - 16263 707 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 16 7 Op 7 . - CDS 16265 - 16462 300 ## gi|212695850|ref|ZP_03303978.1| hypothetical protein ANHYDRO_00383 - Prom 16552 - 16611 4.0 - Term 16558 - 16586 -0.1 17 8 Op 1 . - CDS 16734 - 17099 242 ## gi|212695851|ref|ZP_03303979.1| hypothetical protein ANHYDRO_00384 18 8 Op 2 . - CDS 17145 - 18485 1444 ## COG0372 Citrate synthase 19 8 Op 3 1/0.333 - CDS 18478 - 19485 1305 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 20 8 Op 4 . - CDS 19488 - 21419 2256 ## COG1048 Aconitase A - Prom 21448 - 21507 11.9 - Term 21931 - 21978 3.2 21 9 Tu 1 . - CDS 21985 - 22752 898 ## COG0345 Pyrroline-5-carboxylate reductase - Prom 22776 - 22835 7.9 Predicted protein(s) >gi|325480650|gb|AEXN01000030.1| GENE 1 541 - 2604 2120 687 aa, chain - ## HITS:1 COG:DR2033 KEGG:ns NR:ns ## COG: DR2033 COG3968 # Protein_GI_number: 15807027 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Deinococcus radiodurans # 25 684 120 784 787 521 42.0 1e-147 MNLKEFGNLAFDKKTMKENVPFPVYLKWKEAARNNDILDRETADSIAHAMKSWALSKGAT SYTHWFQPLNGKTANKKTAFLNRDDKHNPINRFSGKELIKGEPDASSFPSGGMRSTFEAR GYTYWDLTANSFIEDKVLYIPSVFVSFYGEKLDKKLPLIESMNRVSKYASPICNLFLKDE KTYRVKSKVGLEQEFYLIDKEFFDKRIDLEYCGMSLVGRDPMVEKEIISHYLGAIPQRVN DFFEDVNEQLYDLGIYMEAEHNEVGPNQFEIAIMFENANISVDNNQLLMHILEKTAIKHN LYCLLKEKPFKNMAGSGKHNNYSLATNYGKNCFSPGKDPKNNHLFLLFLSAMIKVCNKYQ NLIRLSSSSVSNDYRLGGNEAPPSIISVFIGKDLENILKSIANDEEIKDINNKVKIPHLG EIVTDSSDRNRTSPIAFTGNKFEFRMLGSSKSAADLNTVINLSMARVLKEFYQRLEGKDD RDLKDEVYKIVKETYKENSRILFQGDGYSKEWIKEAEKRGLDNHKTFLDALVFAKKNSSY DLYKDEKIFSQKEIDSIINVEFEEITKFCQQELEVLSNMIYQEILPSAMKEIKEIKSYLS FLDNEKLKEKAERINKNVEILLAYGDKIKEILKDLDKIKSQEEKAVFIQEKTRKITDQIR EIADKLENEISRENYSMPRYVDMLKSL >gi|325480650|gb|AEXN01000030.1| GENE 2 2796 - 3860 1331 354 aa, chain + ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 206 351 119 254 255 82 33.0 1e-15 MRKNKKIIILLSGILAFQFFAPKTTAHAKGLIINYDITEGVNIRESGSSSNNSKIIGGID YPDVYEIKEEDNDWYKIDFKDKEGYVGKSWFYVLDDVKTLDKGKIYEKADEKSKEVSDFK KDEKLILVNFADKDFIKVKKGDKTGFIKIDKSDLSKKDSKDLDKVKDKYKKIYDSIKRYM DYLDRNNLSLYPVDEKNKEVQGEINRIYQENDSNDQAYDDSGDEVEYVYYTVDGDDIGSK AYNFATNFIGNPYVWGGTSLTNGVDCSGFTQQVYGKFGIGLPHFAQSQADYGKTINLGEE KAGDLVFFGTSMSNITHVAIADGQGGIVHAANPRDGIITSGIGNPIIIKRLIED >gi|325480650|gb|AEXN01000030.1| GENE 3 3978 - 5249 1910 423 aa, chain + ## HITS:1 COG:FN0488 KEGG:ns NR:ns ## COG: FN0488 COG0334 # Protein_GI_number: 19703823 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Fusobacterium nucleatum # 3 423 18 439 439 446 53.0 1e-125 MTDTLNPLQAAQLQIKKACEKLKLEPAVYEILKDPQRFIEISIPVKMDDGSLKVFKGYRS AHNHALGPSKGGVRFHQNVNAEEVKALSTWMSLKAGLLAIPYGGGKGGITVDPKKLSERE LESLSRGYIRGLYKYLGERIDIPAPDVNTNGNIMSYFTDEYIKLNGDKEDLGTFTGKPLI LGGSLGRSEATGFGVVITTKYVAKKMGLDLKNAQIGLQGFGNVGSYTLKYLIEEGAKVKY LSIRDESEECGRSALYSEDGFDYESLQKYREENKTLAGYPDAEKISDETFWSTKFDILIP AALENIITEEIAKNLDVKLIAEGANGPTTPEADKILKEKNVEVIADILANSGGVLVSYYE WIQNQYGNYWSKDEVQEKQVKDMKKALDGIYQIKEEYKTDLREASYMFAIKRIAQAMKLR GWY >gi|325480650|gb|AEXN01000030.1| GENE 4 5339 - 6055 686 238 aa, chain - ## HITS:1 COG:all4950 KEGG:ns NR:ns ## COG: all4950 COG1943 # Protein_GI_number: 17232442 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Nostoc sp. PCC 7120 # 1 140 1 146 263 73 31.0 4e-13 MARLARKIQNGNIFHIMTKGINREKIFSRKSYKEMILDLYFDEKYDWKIYAYTIMDNHTH FLVYVKGVNDLSEIMKSINVKYSRFYNYVNDRNGHLFQNRYKSVEIKSDKQLFEVLRYIH NNPVFAGIENELGRYEFTSYKNFFIRNINYPIDKEFVDKVRDNFKNQENFYDFHKERFFS IEMDTKEDITFAQNYIMKYINAKNLKREELLEYGKKLVNLGFSKRFVGEKLKVSRRKL >gi|325480650|gb|AEXN01000030.1| GENE 5 6230 - 7210 1361 326 aa, chain - ## HITS:1 COG:SP1027 KEGG:ns NR:ns ## COG: SP1027 COG4086 # Protein_GI_number: 15900898 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Streptococcus pneumoniae TIGR4 # 38 314 41 324 324 126 34.0 5e-29 MKKILKNKWILGLLFAIILTIPQTSKANENFDSTKESYMYGTGLNQNQIDQVKDKLGLTD DINMASVNGADCEKYLGYRANDYDMISSVSVKKLPKGSGIKVDIITPENISSITQSQYTN AAITSGITDAQIKVASPKVVTGESALVGVYKAIELSGEKVDTQSTQTAQEELGTLKKISD ENQDNGSFDKDKLDQAVAEVKQNLKEYKDQNGNPADSKQIQVFIQDALKNVNMGDILSNN NIQILVNYFEKYQESPAIDSKNVEENLKKFAGNLTEKGKKFYQDNKEDIDKVGNDIKESG LWDKIVQFFKDLFSSFTSSDNNNSNN >gi|325480650|gb|AEXN01000030.1| GENE 6 7228 - 8016 1055 262 aa, chain - ## HITS:1 COG:AF2382 KEGG:ns NR:ns ## COG: AF2382 COG0489 # Protein_GI_number: 11499959 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Archaeoglobus fulgidus # 13 251 10 247 254 216 48.0 3e-56 MTENKMNLDKFTIKPKEGSKIKKTIAVMSGKGGVGKSSVTSMLAAKLSKNGNKVAILDAD ITGPSIPQAFGIEDSVRSLEDGTLVAPESKGGIKIMSINLVLQDKSAPVVWRSSIVNNVL KQFYTDVAWGEIDYLLIDMPPGTSDIPLTVFQSLNIDGVVAVTTPQDLVGMVVEKSLNMA KMMGKTTLGLVENMSYFKAPDTGNIYKIFGEGSTEKTAEKFGIDTVSKLAINPEITSLID QGKIEDLDEKDLDNLVEKIENL >gi|325480650|gb|AEXN01000030.1| GENE 7 8565 - 10127 1947 520 aa, chain + ## HITS:1 COG:SP0453_1 KEGG:ns NR:ns ## COG: SP0453_1 COG0834 # Protein_GI_number: 15900370 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Streptococcus pneumoniae TIGR4 # 1 307 1 308 325 256 46.0 1e-67 MKKLLKFLMAFVLAFVFTMEISHADEDTFKVGMEVNYAPFNFSQVDDSNGAVEIKNSKGE YANGYDVQIAKKIADRLGKKLEIYKTEWDGLPPALTSGKIDAIIAGMSPTAERKKEIDFT NSYYVSDLVVVLKKDSPFAKAKSLKDFKDAKLTGQLNTFHYTVLDQIDGLNKQSAMESFP SMISATKSGNIDGYVSEKPGAMSAVSANNDLSYVEFEKGKGFETSSEDTSIAVGLRKNSP MKDEINKILSEMNSKDQDKIMEEMVKLSENDGEKLSFFGQMKEIWSEYSSLFINGIFSTL FISIISTIIGFFIGLVVAVIRKTNVDKNKNIIGYVLQKIINFILAAYIEIFRGTPMMVQA ILIFYGAKQFLAIDMSTMLAAFIIVSINTGAYLAEVVRGGINSVDEGQFEACKALGMTHS QTMFNVVIPQTIKSILPAIANEFVVNIKDTSVLNVISVTELFFVSKSIAGSTYQIFQTYL ITAIIYFILTFVTTRIILLLERRLNNKEFVLESATGGLNA >gi|325480650|gb|AEXN01000030.1| GENE 8 10120 - 10854 279 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 226 1 222 223 112 33 3e-24 MPSIIKVNNLEKKFGQNLVLKDINIEVQKGEVVTIIGSSGSGKSTLLRCLNLLEEPTSGE ILYKDENILEKKFDLRAYRTKVGMVFQNFNLFENKTVLENCTLSQEKVLKISKNEAQEKA KKFLKLVGMDQYVNAKPSQISGGQKQRVAIARALCMDPEVLLFDEPTSALDPEMVGEVLE VMTKLAKEGITMIVVTHEMDFAREVSTRVLFMNEGIILEDGSPEEIFTNPKNQRTKDFLK RYMG >gi|325480650|gb|AEXN01000030.1| GENE 9 10921 - 11427 621 168 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848660|ref|ZP_08170238.1| ## NR: gi|325848660|ref|ZP_08170238.1| hypothetical protein HMPREF9246_0416 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0416 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 168 1 168 168 261 100.0 2e-68 MENKLVELLDKDSSFAYGFLIYEDYEKILINNLDDQGRFDGYTLISKDLVQINEKSDFLK KLKIYNEYWKSISIGKSDSEVFKNEPDFYNIIKYAKDNKKIINIGKNLDYYELICGYVRE SDENFAIIDAVDQNSGEIYDEFEIDIKKIKYIEVESIDNILLNFVNKQ >gi|325480650|gb|AEXN01000030.1| GENE 10 11787 - 12398 690 203 aa, chain - ## HITS:1 COG:SP0725 KEGG:ns NR:ns ## COG: SP0725 COG0352 # Protein_GI_number: 15900622 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 203 7 208 210 153 41.0 2e-37 MKKLYLVTNSDKYTEEEFLKRIEDAIKGGVDILQLREKEKTDLEILNLGKKVKKICDEYN IPMLIDDKPHLAWTLGCGLHVGADDMPISLCRKLLGEKALIGATAKSVEAAKKAQEDGAN YLGVGAIFETKTHVKTKRTSVETFKKIKEAVDIDVYAIGGLNIENVEILKGSNTDGICVV RAIMDANDVYQTSLDLKEKIQEL >gi|325480650|gb|AEXN01000030.1| GENE 11 12395 - 13216 958 273 aa, chain - ## HITS:1 COG:CAC3096 KEGG:ns NR:ns ## COG: CAC3096 COG2145 # Protein_GI_number: 15896347 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Clostridium acetobutylicum # 14 238 9 235 273 155 40.0 7e-38 MINLRKILSNRDLVREKSPLIHAITNPIAINMVANAILFQGAKAICAEHPDEMEDIVKIS DSLSVNLGNITDSRIKSIELAVKFANKKNIPVIIDLVGVGASKLRYDFAKKLLENYKFSL IKGNGSEILAISGNDSNAKGIDVGEKDKTNGENIEKFIEISKDLCQKYQTSVLITGKTDI LVGEKEYFLIENGCENLSKITATGCMLTSLISTFLSVTNPIEASILGLLILEISGEISDR KELYSFFVNLMDNISIISDDEICKRAKIREGKF >gi|325480650|gb|AEXN01000030.1| GENE 12 13185 - 13730 501 181 aa, chain - ## HITS:1 COG:SP0723 KEGG:ns NR:ns ## COG: SP0723 COG4732 # Protein_GI_number: 15900620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 10 164 11 165 174 124 43.0 1e-28 MKKNNSLLIMLTLSMFVTIGVVISPILRFEGFAPTAHFVNIVCSVFLGPWYSLLNGLITA FLRMSFLGIPPLAITGQVFGAVLSGIFYRKSKGSLLAAVIGEIIGTGVIGALVSYPVMKL FYGTGDITWYFYLPSFIIATILGGSVALIFLKTLQKSKVLYTIQKKLGVNVYDKSKKNSI K >gi|325480650|gb|AEXN01000030.1| GENE 13 13739 - 14893 1349 384 aa, chain - ## HITS:1 COG:FN1753 KEGG:ns NR:ns ## COG: FN1753 COG1060 # Protein_GI_number: 19705074 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Fusobacterium nucleatum # 12 382 2 372 376 367 49.0 1e-101 MNIKKVTDYFPEMDIIDSNIKTEVLDNYEKIKNKNVSDADILSSLEKERLDEEDFYNLLS DKALNHLEKMGELAKDKRVRYFGNNVCLFSPIYIANYCENSCRYCGFRAKSDIKRAKLNF EEIEEEMKALSDTGIEDVLILTGESQKFSSVDYIAKACQIAKKYFKTIGIEVYPANVSDY KKLKEAGADFVTVFQESYNPKTYDFYHPYGHKRSWVYRIDTQERAMMAGFRGVGFGTLFG LNDPIEEAFKLGLHAQKIQKKYPHAEIAISLPRIRPTHGADELKFFEVNDKKFFQIMLAL RIFLPFASITLSTREDRDFRNLAVKYAATKISASVDTSIGHRSKKSQDEGDEQFEIADNR SCEDAIKDLKSIGMSPVFTDYINV >gi|325480650|gb|AEXN01000030.1| GENE 14 14895 - 15659 1153 254 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 1 254 1 254 257 337 68.0 1e-92 MEDKFILGGKEFKSRFILGSGKYSVDLIDAAVKNAECEMITVALRRANTKDVANILNYIP KHVTIIPNTSGARNADEAIRIARLAREMGCGNFVKIEIMRDSKYLLPDNEETLKATKVLA DEGFIVLPYMYPDLNYARDLKEAGAAAIMPLAAPIGSNKGLVTKEFIKIIIDEVDLPVIV DAGIGLPSQAAEAMEMGAAAIMANTGIASASDITMMARAFKLGIEAGRLARLSKPGRVLE SGADPSSPLRDFFD >gi|325480650|gb|AEXN01000030.1| GENE 15 15649 - 16263 707 204 aa, chain - ## HITS:1 COG:FN1755 KEGG:ns NR:ns ## COG: FN1755 COG0476 # Protein_GI_number: 19705076 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Fusobacterium nucleatum # 1 162 1 163 165 125 44.0 6e-29 MDLRDKILKRQKNRDNEIFKNSKVSILGCGGLGSNVAMILARAGIGEIYLYDFDKVEYSN LNRQNYKISDIGKEKVLATKKIIEETIPYTKVHAKNMYLDEKNMDEIVGKTDYFIEAFDK KESKVMAFDYFSKKENKFLFTASGMAGLGDISDIKVKKINNITMVGDFKSDAKNDGLYLA YVSIMASLEALECLKKIRKDYYGR >gi|325480650|gb|AEXN01000030.1| GENE 16 16265 - 16462 300 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695850|ref|ZP_03303978.1| ## NR: gi|212695850|ref|ZP_03303978.1| hypothetical protein ANHYDRO_00383 [Anaerococcus hydrogenalis DSM 7454] thiazole biosynthesis protein ThiG [Anaerococcus vaginalis ATCC 51170] thiamine biosynthesis protein ThiS [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00383 [Anaerococcus hydrogenalis DSM 7454] thiazole biosynthesis protein ThiG [Anaerococcus vaginalis ATCC 51170] thiamine biosynthesis protein ThiS [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 103 100.0 6e-21 MVLINGKEVKIKNEISLYEFLKENKFDPHFVAVEVNQELVKRENFKNFLVKDGYKVEVFS FVGGG >gi|325480650|gb|AEXN01000030.1| GENE 17 16734 - 17099 242 121 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695851|ref|ZP_03303979.1| ## NR: gi|212695851|ref|ZP_03303979.1| hypothetical protein ANHYDRO_00384 [Anaerococcus hydrogenalis DSM 7454] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00384 [Anaerococcus hydrogenalis DSM 7454] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 121 1 121 121 204 100.0 2e-51 MNILKNYFKFILKQDVDSKNSSKAFILVRILSFLIAGFFTWGLYYLLDRYNLNIFVKYLI LIYASLAFFTTLPCKTIQMREDENKLSSWIPNFGFYNSLATLISPIYLFKYCKVLQKNKE N >gi|325480650|gb|AEXN01000030.1| GENE 18 17145 - 18485 1444 446 aa, chain - ## HITS:1 COG:L67186 KEGG:ns NR:ns ## COG: L67186 COG0372 # Protein_GI_number: 15672652 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Lactococcus lactis # 15 446 12 441 441 415 48.0 1e-115 MNKEKLIELSWQIKKENTIEKEIYDKYSIKRGLRNKNGTGVLVGVTKVGDVSGYKIKNKE KIPCHGELYYRGYPLTSMVADFNKKKRLGFEEVIYLLLFNKLANKKELEDFKNILVEERK LPDKFFEDTILNLPGNNIVNIMMRSVLSLYSYDENPDDTNTLNVLSQSLSLISKMPLIAI YSYQAKIHKFEGKSLIIHKEDKNKSIAENILSMLRADQKYKKEEAEILDLLLIIHAEHGG GNNSAFATHVVSSSGTDTYSAISTGLGSLKGPRHGGANLKVSQMLDNIRGNLKNLEDEKE IRNYLEKILDKKAFDQKGLIYGLGHAVYTLSDPRAVLLKEKARELSKIKNRQKDYEFIEK IEKNGGEILMERLNKSYPICANVDLYSGFCYEMLDIPKDLYIPIFAIARTVGWSAHRLEQ IEDSKIIRPAYKSLSQAKKYLSMDER >gi|325480650|gb|AEXN01000030.1| GENE 19 18478 - 19485 1305 335 aa, chain - ## HITS:1 COG:CAC0972 KEGG:ns NR:ns ## COG: CAC0972 COG0473 # Protein_GI_number: 15894259 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Clostridium acetobutylicum # 3 330 7 334 334 350 54.0 2e-96 MKVTLIKGDGIGPEICDSMKKILKALGSKVEFEEVNAGASVFEKEKTFIPDEVFKSIEKN KIAIKGPITTPIGHGFRSINVELRKKYDLFANIRPIKSIKNINTKYENVDMVIFRENTED LYMGLEEKISDDEFHSIKVITRKKSERIIRAAFEYARKFNRKKVTIVTKANIMKFTDGLF LNVGREIAKSFPNIEFEELLVDNTAMQMVQNPNKFDVIITENLYGDILSDLAAGLVGGLG LVPGVNKGEDISIYESVHGSAPDIAGKNMANPIAILLTASLMLDDIGEENLSKKLRLSIE KTMENKKNHTRDLKGEASLDEITQAIIKNLGDDYE >gi|325480650|gb|AEXN01000030.1| GENE 20 19488 - 21419 2256 643 aa, chain - ## HITS:1 COG:CAC0971 KEGG:ns NR:ns ## COG: CAC0971 COG1048 # Protein_GI_number: 15894258 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Clostridium acetobutylicum # 1 638 1 638 642 712 56.0 0 MKKSLAMKILQDHLLQGELKSGNEIALKIDQTLTQDSTGTMAYLQLEAMDIEDVNTEKSL AYIDHNILQEGFENADDHEFIKSAANKFGITFSKAGCGICHQVHLEQFGKPGKTLLGSDS HTPTGGALGQIAIGAGGLDVAVAMAKGFYFVKVPKIYNIKLKNSLKDYVNAKDLILYILG KLSVKGGTGYIMEYSGEGVKSLSVTDRATICNMGAELGATTSIFPSDENTLKYLTSQNRK DHYKKLEADEDAFYDEVMEIDLEKIEPAVAKPHFPDRYQKISEMEKIKIDQVAIGSCTNS SYMDMMKVASILDGKKVHPDVSLVISPGSATILEKLSENGALAKMIKAGARILESGCGPC IGMGQAPKAGGVSLRSFNRNFKGRSGTRDAKIYLASPETCAISAINGYISNPKDAHFKKD FDDNIIFDHTDAYYIKREEDLSKRVKETVKGKNIKPFPKARPVSEINTKIIYKAGDGITT DDICPSNARLLPFRSNIEYLSEFAFTTKIDDFKKRAEENSGGVIVAGINYGQGSSREHAA LIPLYLNIKAVIAKSFARIHRSNLINNAILSLEFENEKDYDKLSEFDNIQIKNIDKSLES GKFILEDLDKGIKINLKGEFSKREIEILKMGGYLNYAKNLELE >gi|325480650|gb|AEXN01000030.1| GENE 21 21985 - 22752 898 255 aa, chain - ## HITS:1 COG:lin0414 KEGG:ns NR:ns ## COG: lin0414 COG0345 # Protein_GI_number: 16799491 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Listeria innocua # 2 255 3 266 266 204 46.0 1e-52 MKIGVIGIGNMGFAIAKGLLGKNELFLSNRGSNLEFFKDKDVSIMENREVIENSDYIILA VKPNYYEDVIDEIKDLLDNKVFISIAAGFTLEKLENLLGSDKKIVMTMPNTPASVGEGMS ILCPNSKVSEEEFSNVLAIFSSFGKAIKIDENQFDAASIINGCLPAFVDLFMEAISDGAV FCGLKRDISYKLIAQTIIGSAKLMQESKDHPGLLKDKVTSPKGTTIEGVKALEENNFRAG LIKAVEASFNKTKNM Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:52:51 2011 Seq name: gi|325480648|gb|AEXN01000031.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00024, whole genome shotgun sequence Length of sequence - 858 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 856 946 ## Apre_0739 YSIRK gram-positive signal peptide Predicted protein(s) >gi|325480648|gb|AEXN01000031.1| GENE 1 1 - 856 946 285 aa, chain - ## HITS:1 COG:no KEGG:Apre_0739 NR:ns ## KEGG: Apre_0739 # Name: not_defined # Def: YSIRK gram-positive signal peptide # Organism: A.prevotii # Pathway: not_defined # 2 285 1418 1720 2035 312 65.0 8e-84 ENAELPIEKDTEVIAIWEDIEYKVTFNGNGGSGDMPEKKAKKGSEFELPNNGFEAPKNKK FSHWKIGNENKNPGEKITIDGDTEITAIWKDIMVNVTYNPGEGSGEMKGATITKGSTYKL LANGFTAPENKEFDIWEVNGEKLSPNSEITVDKDTVITAIWKNKTPETPPVTEKVKVIYD ANGGSGNMEVKELNKGSKYTLLANGFTAPAKKKFKGWKIGETEYAAGDEITVDKDTTVTA VWEDIETTPPAKEEVQVSYEPGEGSGTMDGSKLEKGSKYTLLTTG Prediction of potential genes in microbial genomes Time: Wed Jun 22 18:55:53 2011 Seq name: gi|325480382|gb|AEXN01000032.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00032, whole genome shotgun sequence Length of sequence - 244678 bp Number of predicted genes - 270, with homology - 265 Number of transcription units - 97, operones - 54 average op.length - 4.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 21 - 1259 1412 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase - Prom 1288 - 1347 11.0 + Prom 1252 - 1311 9.9 2 2 Tu 1 . + CDS 1382 - 1816 484 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase + Term 1821 - 1868 6.5 3 3 Op 1 . - CDS 1854 - 2981 1446 ## CCC13826_0178 isoaspartyl dipeptidase (EC:3.4.19.5) 4 3 Op 2 1/0.000 - CDS 2978 - 4420 1760 ## COG1757 Na+/H+ antiporter - Prom 4509 - 4568 16.1 - Term 4552 - 4588 3.3 5 4 Op 1 1/0.000 - CDS 4604 - 5779 1734 ## COG0281 Malic enzyme 6 4 Op 2 . - CDS 5790 - 7034 1454 ## COG0114 Fumarase 7 4 Op 3 . - CDS 7003 - 7149 249 ## gi|325848868|ref|ZP_08170378.1| hypothetical protein HMPREF9246_1217 8 4 Op 4 . - CDS 7162 - 8070 918 ## COG0583 Transcriptional regulator 9 4 Op 5 . - CDS 8079 - 8795 574 ## COG1794 Aspartate racemase 10 4 Op 6 . - CDS 8799 - 10049 1599 ## COG1301 Na+/H+-dicarboxylate symporters 11 4 Op 7 . - CDS 10119 - 11537 1843 ## COG1027 Aspartate ammonia-lyase - Prom 11786 - 11845 18.9 - Term 11883 - 11912 1.4 12 5 Op 1 . - CDS 11996 - 12376 389 ## gi|325848835|ref|ZP_08170345.1| hypothetical protein HMPREF9246_1222 13 5 Op 2 . - CDS 12376 - 12888 635 ## CLOST_1250 hypothetical protein 14 5 Op 3 . - CDS 12898 - 13101 243 ## gi|325848956|ref|ZP_08170466.1| hypothetical protein HMPREF9246_1224 15 5 Op 4 8/0.000 - CDS 13098 - 13613 628 ## COG1475 Predicted transcriptional regulators 16 5 Op 5 1/0.000 - CDS 13610 - 14923 925 ## COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase 17 5 Op 6 . - CDS 14923 - 16359 928 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 18 5 Op 7 . - CDS 16352 - 17677 1283 ## gi|325848933|ref|ZP_08170443.1| conserved domain protein - Prom 17772 - 17831 9.7 - Term 17961 - 18022 1.0 19 6 Tu 1 . - CDS 18023 - 18973 953 ## COG3023 Negative regulator of beta-lactamase expression - Prom 18994 - 19053 3.5 20 7 Op 1 . - CDS 19075 - 19350 338 ## gi|325848916|ref|ZP_08170426.1| conserved domain protein 21 7 Op 2 . - CDS 19394 - 19756 435 ## gi|325848998|ref|ZP_08170508.1| hypothetical protein HMPREF9246_1231 22 7 Op 3 . - CDS 19765 - 20205 390 ## gi|325848777|ref|ZP_08170287.1| hypothetical protein HMPREF9246_1232 23 7 Op 4 . - CDS 20199 - 22076 1812 ## SAK_0759 prophage LambdaSa04, minor structural protein 24 7 Op 5 . - CDS 22085 - 26653 4383 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 25 7 Op 6 . - CDS 26650 - 28293 1273 ## HMPREF9243_0214 Cpl-7 lysozyme C-terminal domain protein 26 7 Op 7 . - CDS 28294 - 30630 2415 ## COG5412 Phage-related protein 27 7 Op 8 . - CDS 30620 - 30976 365 ## SP70585_0071 hypothetical protein 28 7 Op 9 . - CDS 30997 - 31320 356 ## gi|325848860|ref|ZP_08170370.1| hypothetical protein HMPREF9246_1238 29 7 Op 10 . - CDS 31320 - 31898 912 ## SP70585_0069 major tail protein 30 7 Op 11 . - CDS 31910 - 32257 360 ## SDEG_1122 phage protein 31 7 Op 12 . - CDS 32254 - 32490 374 ## SpyM3_1109 hypothetical protein 32 7 Op 13 . - CDS 32487 - 32822 325 ## LLKF_1074 phage protein 33 7 Op 14 . - CDS 32779 - 33201 527 ## LLKF_1073 phage protein 34 7 Op 15 . - CDS 33203 - 33469 409 ## gi|325848928|ref|ZP_08170438.1| hypothetical protein HMPREF9246_1244 35 7 Op 16 . - CDS 33469 - 34365 1337 ## M5005_Spy_1187 phage structural protein 36 7 Op 17 . - CDS 34368 - 34850 653 ## MGAS10750_Spy1298 phage protein - Prom 34872 - 34931 6.4 - Term 34885 - 34925 4.5 37 8 Tu 1 . - CDS 34934 - 36322 1440 ## LLKF_1069 phage terminase - Prom 36352 - 36411 6.4 38 9 Op 1 . - CDS 36438 - 36731 505 ## HMPREF0868_0550 hypothetical protein 39 9 Op 2 . - CDS 36700 - 37758 961 ## SP670_0075 GP35 40 9 Op 3 . - CDS 37748 - 39004 1403 ## LLKF_1067 phage protein - Prom 39031 - 39090 5.8 41 9 Op 4 . - CDS 39103 - 39459 352 ## COG1403 Restriction endonuclease - Prom 39481 - 39540 5.9 - Term 39473 - 39520 7.3 42 10 Op 1 . - CDS 39703 - 40140 220 ## gi|325848975|ref|ZP_08170485.1| hypothetical protein HMPREF9246_1252 43 10 Op 2 . - CDS 40153 - 40557 536 ## COG0756 dUTPase 44 10 Op 3 . - CDS 40550 - 40711 280 ## gi|212696834|ref|ZP_03304962.1| hypothetical protein ANHYDRO_01397 45 10 Op 4 . - CDS 40704 - 41090 274 ## Apre_0813 endodeoxyribonuclease RusA 46 10 Op 5 . - CDS 41144 - 41332 194 ## gi|325848739|ref|ZP_08170249.1| conserved domain protein 47 10 Op 6 . - CDS 41340 - 41786 575 ## COG0629 Single-stranded DNA-binding protein 48 10 Op 7 . - CDS 41779 - 42024 411 ## gi|325848978|ref|ZP_08170488.1| hypothetical protein HMPREF9246_1258 49 10 Op 8 . - CDS 42041 - 42238 195 ## gi|325848966|ref|ZP_08170476.1| hypothetical protein HMPREF9246_1259 50 10 Op 9 . - CDS 42235 - 42372 84 ## gi|325848831|ref|ZP_08170341.1| hypothetical protein HMPREF9246_1260 51 10 Op 10 . - CDS 42423 - 42602 154 ## gi|325848907|ref|ZP_08170417.1| hypothetical protein HMPREF9246_1261 52 10 Op 11 . - CDS 42602 - 42790 194 ## gi|325848794|ref|ZP_08170304.1| hypothetical protein HMPREF9246_1262 53 10 Op 12 . - CDS 42800 - 43675 581 ## CLH_1752 phage protein 54 10 Op 13 . - CDS 43687 - 44157 488 ## gi|325848964|ref|ZP_08170474.1| hypothetical protein HMPREF9246_1264 55 10 Op 14 . - CDS 44129 - 44347 291 ## gi|325848858|ref|ZP_08170368.1| hypothetical protein HMPREF9246_1265 - Prom 44373 - 44432 5.8 - Term 44374 - 44444 8.1 56 11 Op 1 . - CDS 44511 - 44762 359 ## gi|325848796|ref|ZP_08170306.1| hypothetical protein HMPREF9246_1266 57 11 Op 2 . - CDS 44778 - 44966 168 ## gi|325848871|ref|ZP_08170381.1| conserved domain protein + Prom 44841 - 44900 5.3 58 12 Tu 1 . + CDS 45059 - 45415 446 ## gi|325848905|ref|ZP_08170415.1| hypothetical protein HMPREF9246_1268 59 13 Op 1 . - CDS 45416 - 45652 58 ## 60 13 Op 2 . - CDS 45719 - 45949 323 ## gi|325848949|ref|ZP_08170459.1| hypothetical protein HMPREF9246_1269 - Prom 45988 - 46047 9.4 + Prom 45983 - 46042 9.6 61 14 Op 1 . + CDS 46092 - 46598 537 ## Closa_0842 XRE family transcriptional regulator 62 14 Op 2 . + CDS 46595 - 47008 462 ## gi|325848815|ref|ZP_08170325.1| putative toxin-antitoxin system, toxin component 63 14 Op 3 . + CDS 47011 - 47658 498 ## gi|325848874|ref|ZP_08170384.1| hypothetical protein HMPREF9246_1272 + Term 47714 - 47744 1.2 64 15 Tu 1 . + CDS 47761 - 48822 1113 ## COG0582 Integrase + Term 48829 - 48861 2.5 - Term 48863 - 48915 1.3 65 16 Op 1 34/0.000 - CDS 48961 - 49860 1020 ## COG1126 ABC-type polar amino acid transport system, ATPase component - TRNA 49005 - 49094 68.4 # Leu AAG 0 0 66 16 Op 2 31/0.000 - CDS 49853 - 50560 892 ## COG0765 ABC-type amino acid transport system, permease component 67 16 Op 3 . - CDS 50564 - 51370 1194 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain - Prom 51405 - 51464 8.9 - Term 51488 - 51524 -0.6 68 17 Tu 1 . - CDS 51721 - 52992 1545 ## COG2873 O-acetylhomoserine sulfhydrylase 69 18 Tu 1 . - CDS 53346 - 57605 5315 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Term 57897 - 57925 -0.1 70 19 Op 1 . - CDS 57931 - 58536 697 ## COG1335 Amidases related to nicotinamidase 71 19 Op 2 . - CDS 58521 - 59444 872 ## COG1242 Predicted Fe-S oxidoreductase - Prom 59465 - 59524 5.9 - Term 59457 - 59495 2.0 72 20 Op 1 21/0.000 - CDS 59529 - 59753 353 ## PROTEIN SUPPORTED gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 73 20 Op 2 24/0.000 - CDS 59770 - 60300 545 ## COG0629 Single-stranded DNA-binding protein 74 20 Op 3 . - CDS 60301 - 60585 365 ## PROTEIN SUPPORTED gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 - Prom 60622 - 60681 2.4 75 20 Op 4 . - CDS 60684 - 61616 1493 ## COG3191 L-aminopeptidase/D-esterase - Prom 61735 - 61794 11.8 - Term 61810 - 61870 9.9 76 21 Op 1 . - CDS 61998 - 62672 994 ## Apre_0481 hypothetical protein 77 21 Op 2 . - CDS 62693 - 63685 1041 ## gi|325848873|ref|ZP_08170383.1| hypothetical protein HMPREF9246_1289 + Prom 63700 - 63759 7.9 78 22 Op 1 36/0.000 + CDS 63784 - 66042 2443 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 79 22 Op 2 . + CDS 66048 - 66485 374 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 66505 - 66555 8.2 + Prom 66514 - 66573 13.4 80 23 Op 1 2/0.000 + CDS 66619 - 66894 219 ## COG0640 Predicted transcriptional regulators 81 23 Op 2 . + CDS 66884 - 67525 592 ## COG5658 Predicted integral membrane protein + Term 67537 - 67569 -0.9 - Term 67516 - 67563 5.8 82 24 Op 1 . - CDS 67564 - 68367 847 ## Amet_2548 sporulation domain-containing protein 83 24 Op 2 . - CDS 68364 - 68762 474 ## COG4824 Phage-related holin (Lysis protein) 84 24 Op 3 . - CDS 68819 - 69304 568 ## Apre_0406 hypothetical protein - Prom 69374 - 69433 13.0 + Prom 69281 - 69340 9.8 85 25 Tu 1 . + CDS 69405 - 69959 847 ## Apre_0405 hypothetical protein 86 26 Tu 1 . + CDS 70813 - 72252 1599 ## COG0165 Argininosuccinate lyase + Term 72316 - 72355 1.5 - Term 72290 - 72352 8.1 87 27 Tu 1 . - CDS 72381 - 73325 837 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 73386 - 73445 9.8 - Term 73454 - 73503 7.3 88 28 Tu 1 . - CDS 73504 - 74745 1847 ## COG0137 Argininosuccinate synthase 89 29 Op 1 . - CDS 75107 - 75694 764 ## COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein 90 29 Op 2 . - CDS 75694 - 77139 1655 ## COG0366 Glycosidases 91 29 Op 3 . - CDS 77140 - 77781 915 ## COG0274 Deoxyribose-phosphate aldolase 92 29 Op 4 . - CDS 77771 - 78871 1069 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit - Prom 78941 - 79000 11.8 - Term 78986 - 79019 2.4 93 30 Op 1 50/0.000 - CDS 79036 - 79377 513 ## PROTEIN SUPPORTED gi|227501162|ref|ZP_03931211.1| ribosomal protein L17 94 30 Op 2 26/0.000 - CDS 79387 - 80343 1059 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 95 30 Op 3 36/0.000 - CDS 80377 - 80970 840 ## PROTEIN SUPPORTED gi|228002937|ref|ZP_04049929.1| SSU ribosomal protein S4P 96 30 Op 4 48/0.000 - CDS 80983 - 81387 574 ## PROTEIN SUPPORTED gi|227485500|ref|ZP_03915816.1| ribosomal protein S11 97 30 Op 5 . - CDS 81396 - 81737 493 ## PROTEIN SUPPORTED gi|228002935|ref|ZP_04049927.1| SSU ribosomal protein S13P 98 30 Op 6 . - CDS 81749 - 81862 198 ## PROTEIN SUPPORTED gi|227485502|ref|ZP_03915818.1| ribosomal protein L36 - Prom 81924 - 81983 3.2 99 31 Op 1 6/0.000 - CDS 81993 - 82211 252 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 82240 - 82299 3.1 100 31 Op 2 28/0.000 - CDS 82379 - 83023 924 ## COG0563 Adenylate kinase and related kinases 101 31 Op 3 53/0.000 - CDS 83028 - 84299 854 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 102 31 Op 4 48/0.000 - CDS 84299 - 84742 631 ## PROTEIN SUPPORTED gi|228002930|ref|ZP_04049922.1| LSU ribosomal protein L15P 103 31 Op 5 50/0.000 - CDS 84753 - 84935 232 ## PROTEIN SUPPORTED gi|228002929|ref|ZP_04049921.1| LSU ribosomal protein L30P 104 31 Op 6 56/0.000 - CDS 84947 - 85453 609 ## PROTEIN SUPPORTED gi|169823869|ref|YP_001691480.1| 30S ribosomal protein S5 105 31 Op 7 46/0.000 - CDS 85469 - 85834 460 ## PROTEIN SUPPORTED gi|227501150|ref|ZP_03931199.1| ribosomal protein L18 106 31 Op 8 55/0.000 - CDS 85844 - 86383 736 ## PROTEIN SUPPORTED gi|227501149|ref|ZP_03931198.1| ribosomal protein L6 107 31 Op 9 50/0.000 - CDS 86394 - 86789 592 ## PROTEIN SUPPORTED gi|228002925|ref|ZP_04049917.1| SSU ribosomal protein S8P 108 31 Op 10 50/0.000 - CDS 86808 - 86993 284 ## PROTEIN SUPPORTED gi|240145865|ref|ZP_04744466.1| small subunit ribosomal protein S14 109 31 Op 11 48/0.000 - CDS 87005 - 87547 799 ## PROTEIN SUPPORTED gi|227501146|ref|ZP_03931195.1| ribosomal protein L5 110 31 Op 12 57/0.000 - CDS 87565 - 87873 415 ## PROTEIN SUPPORTED gi|227501145|ref|ZP_03931194.1| ribosomal protein L24 111 31 Op 13 50/0.000 - CDS 87883 - 88251 541 ## PROTEIN SUPPORTED gi|227501144|ref|ZP_03931193.1| ribosomal protein L14 112 31 Op 14 . - CDS 88271 - 88531 331 ## PROTEIN SUPPORTED gi|228002920|ref|ZP_04049912.1| SSU ribosomal protein S17P 113 31 Op 15 . - CDS 88536 - 88742 278 ## PROTEIN SUPPORTED gi|227501142|ref|ZP_03931191.1| ribosomal protein L29 114 31 Op 16 50/0.000 - CDS 88742 - 89173 674 ## PROTEIN SUPPORTED gi|227501141|ref|ZP_03931190.1| ribosomal protein L16 115 31 Op 17 61/0.000 - CDS 89203 - 89928 1017 ## PROTEIN SUPPORTED gi|228002917|ref|ZP_04049909.1| SSU ribosomal protein S3P 116 31 Op 18 59/0.000 - CDS 89931 - 90278 485 ## PROTEIN SUPPORTED gi|228002916|ref|ZP_04049908.1| LSU ribosomal protein L22P 117 31 Op 19 60/0.000 - CDS 90289 - 90576 471 ## PROTEIN SUPPORTED gi|227485521|ref|ZP_03915837.1| ribosomal protein S19 118 31 Op 20 61/0.000 - CDS 90586 - 91419 1207 ## PROTEIN SUPPORTED gi|227501137|ref|ZP_03931186.1| ribosomal protein L2 119 31 Op 21 61/0.000 - CDS 91431 - 91724 431 ## PROTEIN SUPPORTED gi|227501136|ref|ZP_03931185.1| ribosomal protein L23 120 31 Op 22 58/0.000 - CDS 91724 - 92347 863 ## PROTEIN SUPPORTED gi|227501135|ref|ZP_03931184.1| ribosomal protein L4 121 31 Op 23 40/0.000 - CDS 92361 - 92990 925 ## PROTEIN SUPPORTED gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 122 31 Op 24 . - CDS 93056 - 93364 482 ## PROTEIN SUPPORTED gi|228002910|ref|ZP_04049902.1| SSU ribosomal protein S10P - Prom 93504 - 93563 8.4 - Term 93512 - 93552 -0.6 123 32 Tu 1 . - CDS 93661 - 94308 720 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 94349 - 94408 8.2 124 33 Tu 1 . + CDS 94507 - 95832 1493 ## COG1115 Na+/alanine symporter + Term 95844 - 95877 5.1 - Term 95826 - 95869 8.1 125 34 Op 1 . - CDS 95895 - 97511 2219 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 97561 - 97620 5.0 126 34 Op 2 . - CDS 97624 - 99102 1816 ## COG2326 Uncharacterized conserved protein - Prom 99188 - 99247 14.3 + Prom 99121 - 99180 13.1 127 35 Op 1 . + CDS 99240 - 100058 1009 ## COG0561 Predicted hydrolases of the HAD superfamily 128 35 Op 2 . + CDS 100125 - 101237 1891 ## COG0686 Alanine dehydrogenase + Term 101244 - 101296 0.5 - Term 101233 - 101282 8.3 129 36 Tu 1 . - CDS 101288 - 102226 1078 ## HMPREF9243_1025 putative 2-keto-3-deoxygluconate transporter - Prom 102247 - 102306 9.8 + Prom 102203 - 102262 10.6 130 37 Op 1 11/0.000 + CDS 102463 - 103395 417 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 131 37 Op 2 . + CDS 103396 - 103704 417 ## COG0526 Thiol-disulfide isomerase and thioredoxins 132 37 Op 3 . + CDS 103704 - 105596 2627 ## HMPREF9243_1609 hypothetical protein + Term 105610 - 105642 4.0 - Term 105596 - 105628 4.0 133 38 Tu 1 . - CDS 105700 - 106347 880 ## COG0176 Transaldolase - Prom 106375 - 106434 11.4 + Prom 106389 - 106448 8.8 134 39 Op 1 . + CDS 106470 - 106958 559 ## COG0262 Dihydrofolate reductase 135 39 Op 2 . + CDS 106955 - 107194 275 ## Apre_1627 hypothetical protein + Term 107385 - 107416 0.1 - Term 107259 - 107309 3.5 136 40 Tu 1 . - CDS 107406 - 108626 1257 ## COG0205 6-phosphofructokinase - Prom 108651 - 108710 7.3 - Term 108674 - 108713 6.1 137 41 Op 1 . - CDS 108730 - 109176 716 ## COG0698 Ribose 5-phosphate isomerase RpiB 138 41 Op 2 . - CDS 109190 - 111181 2471 ## COG0021 Transketolase 139 41 Op 3 . - CDS 111204 - 112193 1450 ## COG2376 Dihydroxyacetone kinase 140 41 Op 4 . - CDS 112204 - 113082 1003 ## TepRe1_2211 hypothetical protein 141 41 Op 5 . - CDS 113092 - 113877 1042 ## COG0149 Triosephosphate isomerase 142 41 Op 6 . - CDS 113886 - 116129 2463 ## COG0554 Glycerol kinase 143 41 Op 7 . - CDS 116131 - 117672 2007 ## COG1070 Sugar (pentulose and hexulose) kinases 144 41 Op 8 4/0.000 - CDS 117737 - 118102 442 ## COG3862 Uncharacterized protein with conserved CXXC pairs 145 41 Op 9 6/0.000 - CDS 118092 - 119369 1695 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 146 41 Op 10 . - CDS 119372 - 120811 2006 ## COG0579 Predicted dehydrogenase 147 41 Op 11 . - CDS 120821 - 121069 388 ## COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit 148 41 Op 12 . - CDS 121045 - 122100 1301 ## COG1850 Ribulose 1,5-bisphosphate carboxylase, large subunit - Prom 122343 - 122402 17.3 + Prom 122219 - 122278 12.2 149 42 Tu 1 . + CDS 122347 - 123108 851 ## COG1349 Transcriptional regulators of sugar metabolism + Term 123130 - 123162 -0.8 + Prom 123134 - 123193 9.1 150 43 Op 1 . + CDS 123318 - 124367 1385 ## COG0240 Glycerol-3-phosphate dehydrogenase 151 43 Op 2 . + CDS 124388 - 125893 2095 ## COG1070 Sugar (pentulose and hexulose) kinases + Term 125906 - 125949 2.1 152 43 Op 3 . + CDS 125958 - 126764 904 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 126799 - 126858 10.7 - Term 126848 - 126899 8.2 153 44 Op 1 1/0.000 - CDS 126971 - 128305 1673 ## COG0733 Na+-dependent transporters of the SNF family - Term 128316 - 128353 5.7 154 44 Op 2 . - CDS 128371 - 130014 2259 ## COG3033 Tryptophanase - Prom 130220 - 130279 9.3 155 45 Op 1 . - CDS 130373 - 130999 720 ## Apre_0269 hypothetical protein 156 45 Op 2 . - CDS 130941 - 131645 751 ## COG3884 Acyl-ACP thioesterase 157 45 Op 3 . - CDS 131647 - 133281 1814 ## COG0661 Predicted unusual protein kinase 158 45 Op 4 . - CDS 133284 - 133724 610 ## COG2131 Deoxycytidylate deaminase - Prom 133749 - 133808 8.3 - Term 133777 - 133810 2.0 159 46 Op 1 . - CDS 133839 - 135092 1052 ## Apre_0432 hypothetical protein 160 46 Op 2 8/0.000 - CDS 135092 - 135955 1058 ## COG1131 ABC-type multidrug transport system, ATPase component 161 46 Op 3 . - CDS 135927 - 136319 430 ## COG1725 Predicted transcriptional regulators - Prom 136464 - 136523 10.8 - Term 136716 - 136752 7.3 162 47 Tu 1 . - CDS 136770 - 137006 256 ## gi|325848989|ref|ZP_08170499.1| conserved domain protein - Prom 137243 - 137302 5.5 163 48 Tu 1 . - CDS 137312 - 138202 1068 ## gi|325848857|ref|ZP_08170367.1| hypothetical protein HMPREF9246_1376 - Term 138377 - 138408 1.1 164 49 Tu 1 . - CDS 138597 - 140177 1726 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes - Prom 140332 - 140391 11.7 + Prom 140133 - 140192 14.1 165 50 Op 1 . + CDS 140354 - 141160 556 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase 166 50 Op 2 . + CDS 141157 - 142497 1629 ## COG0534 Na+-driven multidrug efflux pump + Term 142569 - 142614 -0.8 + Prom 142506 - 142565 6.8 167 51 Tu 1 . + CDS 142626 - 142853 348 ## gi|325848954|ref|ZP_08170464.1| putative lipoprotein + Term 142866 - 142914 8.1 - Term 142777 - 142828 6.1 168 52 Tu 1 . - CDS 142960 - 143133 298 ## gi|325848752|ref|ZP_08170262.1| hypothetical protein HMPREF9246_1381 - Prom 143254 - 143313 11.8 + Prom 143180 - 143239 8.8 169 53 Tu 1 . + CDS 143407 - 145521 1456 ## gi|212696329|ref|ZP_03304457.1| hypothetical protein ANHYDRO_00866 - Term 145515 - 145574 2.6 170 54 Op 1 . - CDS 145582 - 145836 337 ## COG4466 Uncharacterized protein conserved in bacteria 171 54 Op 2 . - CDS 145914 - 147299 1864 ## COG1362 Aspartyl aminopeptidase 172 54 Op 3 . - CDS 147308 - 149152 2046 ## COG0326 Molecular chaperone, HSP90 family 173 54 Op 4 . - CDS 149214 - 149546 253 ## gi|325848890|ref|ZP_08170400.1| hypothetical protein HMPREF9246_1385 - Prom 149676 - 149735 4.4 + Prom 149565 - 149624 5.4 174 55 Tu 1 . + CDS 149644 - 149859 358 ## Apre_0399 hypothetical protein + Term 149867 - 149902 5.3 - Term 149855 - 149890 5.3 175 56 Tu 1 . - CDS 149897 - 151303 867 ## PROTEIN SUPPORTED gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 - Prom 151339 - 151398 16.4 176 57 Tu 1 . - CDS 151615 - 152721 1740 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 152774 - 152833 5.0 177 58 Tu 1 . - CDS 153097 - 154272 1503 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family - Prom 154295 - 154354 6.5 - Term 154332 - 154376 9.0 178 59 Op 1 . - CDS 154383 - 156203 2717 ## COG2213 Phosphotransferase system, mannitol-specific IIBC component 179 59 Op 2 . - CDS 156222 - 156971 833 ## COG1349 Transcriptional regulators of sugar metabolism 180 59 Op 3 . - CDS 156971 - 158107 1472 ## COG0240 Glycerol-3-phosphate dehydrogenase - Prom 158133 - 158192 11.6 - Term 158139 - 158197 12.6 181 60 Op 1 . - CDS 158226 - 158600 207 ## gi|325848861|ref|ZP_08170371.1| hypothetical protein HMPREF9246_1394 182 60 Op 2 . - CDS 158548 - 159048 643 ## gi|325848940|ref|ZP_08170450.1| hypothetical protein HMPREF9246_1395 183 60 Op 3 . - CDS 159038 - 159688 773 ## Apre_0165 lipopolysaccharide biosynthesis protein 184 60 Op 4 . - CDS 159698 - 160816 918 ## Apre_0164 hypothetical protein - Prom 160836 - 160895 7.7 185 61 Op 1 1/0.000 - CDS 160918 - 161439 716 ## COG1335 Amidases related to nicotinamidase - Prom 161459 - 161518 13.6 186 61 Op 2 . - CDS 161528 - 162583 984 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 162611 - 162670 3.3 - Term 162636 - 162664 -1.0 187 62 Op 1 . - CDS 162672 - 163322 905 ## gi|325848799|ref|ZP_08170309.1| conserved domain protein 188 62 Op 2 . - CDS 163332 - 164009 535 ## gi|325848886|ref|ZP_08170396.1| hypothetical protein HMPREF9246_1401 - Prom 164165 - 164224 12.9 189 63 Tu 1 . + CDS 164381 - 164923 493 ## gi|325848806|ref|ZP_08170316.1| conserved domain protein - Term 164892 - 164942 6.6 190 64 Op 1 . - CDS 164944 - 166245 1982 ## COG0213 Thymidine phosphorylase 191 64 Op 2 . - CDS 166299 - 166520 350 ## gi|325848921|ref|ZP_08170431.1| hypothetical protein HMPREF9246_1404 - Prom 166604 - 166663 12.1 + Prom 166521 - 166580 4.7 192 65 Tu 1 . + CDS 166611 - 167015 402 ## gi|325848845|ref|ZP_08170355.1| hypothetical protein HMPREF9246_1405 + Term 167027 - 167089 -0.1 193 66 Op 1 . - CDS 167029 - 167478 558 ## HMPREF9243_0200 hypothetical protein - Term 167492 - 167532 6.1 194 66 Op 2 . - CDS 167543 - 168946 397 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 169033 - 169092 6.3 - Term 169029 - 169083 -1.0 195 67 Tu 1 . - CDS 169107 - 170426 942 ## COG2211 Na+/melibiose symporter and related transporters - Term 170439 - 170472 3.1 196 68 Op 1 25/0.000 - CDS 170478 - 171515 1219 ## COG0687 Spermidine/putrescine-binding periplasmic protein 197 68 Op 2 36/0.000 - CDS 171553 - 172350 773 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 198 68 Op 3 30/0.000 - CDS 172340 - 173137 779 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 199 68 Op 4 . - CDS 173130 - 174236 1076 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 174257 - 174316 11.6 200 69 Tu 1 . - CDS 174340 - 174435 124 ## - Term 174446 - 174499 11.7 201 70 Op 1 4/0.000 - CDS 174500 - 175063 495 ## COG0732 Restriction endonuclease S subunits 202 70 Op 2 27/0.000 - CDS 175014 - 176144 1117 ## COG0732 Restriction endonuclease S subunits 203 70 Op 3 . - CDS 176132 - 178243 2108 ## COG0286 Type I restriction-modification system methyltransferase subunit 204 70 Op 4 . - CDS 178245 - 178454 256 ## Rumal_2514 XRE family transcriptional regulator (EC:2.1.1.37) - Prom 178701 - 178760 9.1 - Term 178747 - 178798 11.1 205 71 Op 1 . - CDS 178845 - 179930 1370 ## COG1454 Alcohol dehydrogenase, class IV 206 71 Op 2 . - CDS 179927 - 180787 806 ## Olsu_0320 transcriptional regulator, MerR family 207 71 Op 3 . - CDS 180797 - 181420 501 ## Olsu_0319 hypothetical protein 208 71 Op 4 . - CDS 181422 - 182348 828 ## COG0457 FOG: TPR repeat 209 71 Op 5 . - CDS 182345 - 183136 802 ## Olsu_0317 Tetratricopeptide TPR_4 210 71 Op 6 2/0.000 - CDS 183142 - 183417 653 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 211 71 Op 7 2/0.000 - CDS 183459 - 185051 2155 ## COG1012 NAD-dependent aldehyde dehydrogenases 212 71 Op 8 . - CDS 185079 - 185489 727 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein - Prom 185654 - 185713 4.3 213 72 Tu 1 . - CDS 186144 - 186452 421 ## gi|325848999|ref|ZP_08170509.1| conserved domain protein - Prom 186486 - 186545 2.4 214 73 Op 1 . - CDS 186586 - 186729 115 ## gi|212696372|ref|ZP_03304500.1| hypothetical protein ANHYDRO_00909 215 73 Op 2 . - CDS 186723 - 187016 560 ## Olsu_0310 microcompartments protein 216 73 Op 3 . - CDS 187006 - 187650 683 ## COG4820 Ethanolamine utilization protein, possible chaperonin - Prom 187769 - 187828 6.8 - Term 187705 - 187744 -0.2 217 74 Op 1 . - CDS 187847 - 188395 474 ## gi|325848839|ref|ZP_08170349.1| hypothetical protein HMPREF9246_1430 218 74 Op 2 4/0.000 - CDS 188383 - 188838 466 ## COG4917 Ethanolamine utilization protein 219 74 Op 3 . - CDS 188835 - 189173 508 ## COG4810 Ethanolamine utilization protein 220 74 Op 4 11/0.000 - CDS 189182 - 190144 941 ## COG1180 Pyruvate-formate lyase-activating enzyme 221 74 Op 5 . - CDS 190162 - 192711 3106 ## COG1882 Pyruvate-formate lyase 222 74 Op 6 2/0.000 - CDS 192720 - 194153 1271 ## COG1012 NAD-dependent aldehyde dehydrogenases 223 74 Op 7 5/0.000 - CDS 194163 - 194453 500 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 224 74 Op 8 . - CDS 194462 - 194755 496 ## COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein 225 74 Op 9 . - CDS 194764 - 195027 421 ## Dred_3284 hypothetical protein 226 74 Op 10 . - CDS 195027 - 196118 1398 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 196347 - 196406 5.9 227 75 Op 1 . - CDS 196408 - 196512 120 ## - Prom 196545 - 196604 8.8 228 75 Op 2 . - CDS 196610 - 197380 604 ## gi|325848748|ref|ZP_08170258.1| response regulator receiver domain protein 229 75 Op 3 . - CDS 197381 - 198637 1008 ## COG4936 Predicted sensor domain - Prom 198661 - 198720 9.9 230 76 Op 1 . - CDS 198722 - 200038 745 ## PROTEIN SUPPORTED gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P 231 76 Op 2 . - CDS 200091 - 200687 596 ## COG4816 Ethanolamine utilization protein - Prom 200724 - 200783 4.5 232 77 Op 1 11/0.000 - CDS 200862 - 201779 862 ## COG1180 Pyruvate-formate lyase-activating enzyme 233 77 Op 2 . - CDS 201792 - 204368 3016 ## COG1882 Pyruvate-formate lyase - Prom 204400 - 204459 6.6 234 78 Op 1 . - CDS 204685 - 205143 557 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 205155 - 205188 3.1 235 78 Op 2 . - CDS 205196 - 208306 3461 ## COG0060 Isoleucyl-tRNA synthetase - Prom 208544 - 208603 9.9 - Term 208341 - 208369 0.5 236 79 Op 1 . - CDS 208608 - 209021 621 ## COG2510 Predicted membrane protein - Prom 209109 - 209168 5.2 237 79 Op 2 . - CDS 209213 - 210481 1567 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Prom 210563 - 210622 8.8 238 80 Op 1 . - CDS 210898 - 211182 351 ## gi|325848755|ref|ZP_08170265.1| hypothetical protein HMPREF9246_1450 239 80 Op 2 . - CDS 211166 - 211390 330 ## Apre_0283 hypothetical protein 240 80 Op 3 . - CDS 211390 - 211860 431 ## COG0386 Glutathione peroxidase + Prom 211892 - 211951 9.4 241 81 Tu 1 . + CDS 211993 - 213174 1683 ## COG1251 NAD(P)H-nitrite reductase + Term 213175 - 213221 9.1 - Term 213168 - 213202 6.0 242 82 Op 1 . - CDS 213208 - 214428 1284 ## COG2312 Erythromycin esterase homolog 243 82 Op 2 36/0.000 - CDS 214431 - 216416 1504 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 244 82 Op 3 4/0.000 - CDS 216403 - 217176 247 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 217217 - 217276 13.7 - Term 217499 - 217539 -0.9 245 83 Op 1 40/0.000 - CDS 217647 - 218399 630 ## COG0642 Signal transduction histidine kinase - Prom 218435 - 218494 15.0 246 83 Op 2 . - CDS 218587 - 219255 722 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 219276 - 219335 8.1 - Term 219305 - 219332 0.1 247 84 Op 1 . - CDS 219525 - 220817 1959 ## COG4091 Predicted homoserine dehydrogenase 248 84 Op 2 . - CDS 220810 - 222015 1108 ## COG2081 Predicted flavoproteins 249 84 Op 3 . - CDS 222012 - 223442 1434 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 250 84 Op 4 1/0.000 - CDS 223443 - 224627 1650 ## COG1171 Threonine dehydratase - Prom 224655 - 224714 11.0 - Term 224849 - 224904 4.2 251 85 Op 1 . - CDS 224907 - 225137 367 ## COG0695 Glutaredoxin and related proteins 252 85 Op 2 7/0.000 - CDS 225214 - 226062 748 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 253 85 Op 3 3/0.000 - CDS 226059 - 226589 648 ## COG1658 Small primase-like proteins (Toprim domain) 254 85 Op 4 8/0.000 - CDS 226595 - 227359 676 ## COG0084 Mg-dependent DNase 255 85 Op 5 . - CDS 227359 - 229296 2259 ## COG0143 Methionyl-tRNA synthetase - Prom 229348 - 229407 14.5 - Term 229400 - 229434 2.5 256 86 Tu 1 . - CDS 229443 - 229991 624 ## gi|325848856|ref|ZP_08170366.1| hypothetical protein HMPREF9246_1469 - Prom 230101 - 230160 5.5 257 87 Tu 1 . + CDS 229969 - 230277 89 ## + Term 230330 - 230366 -0.8 + Prom 230415 - 230474 8.2 258 88 Tu 1 . + CDS 230575 - 230736 116 ## 259 89 Op 1 . - CDS 231008 - 231616 548 ## Apre_0398 chromosome segregation ATPase-like protein 260 89 Op 2 . - CDS 231619 - 232200 659 ## gi|325848773|ref|ZP_08170283.1| hypothetical protein HMPREF9246_1471 - Prom 232270 - 232329 4.8 261 90 Tu 1 . - CDS 232344 - 232967 759 ## gi|325848757|ref|ZP_08170267.1| hypothetical protein HMPREF9246_1472 - Prom 233051 - 233110 6.3 - Term 233111 - 233148 5.3 262 91 Tu 1 . - CDS 233160 - 234425 841 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 234610 - 234669 10.1 263 92 Op 1 . - CDS 234671 - 235087 414 ## HMPREF0868_0260 hypothetical protein 264 92 Op 2 . - CDS 235097 - 235300 173 ## HMPREF0868_0259 Xre family toxin-antitoxin system antitoxin protein - Prom 235339 - 235398 9.8 - Term 235663 - 235711 4.1 265 93 Tu 1 . - CDS 235749 - 236903 1692 ## COG1454 Alcohol dehydrogenase, class IV - Prom 236926 - 236985 3.5 266 94 Tu 1 . + CDS 237318 - 240527 4025 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) + Term 240530 - 240574 11.1 - Term 240513 - 240564 7.5 267 95 Tu 1 . - CDS 240568 - 241911 1548 ## Csal_1709 hypothetical protein - Term 242269 - 242305 -1.0 268 96 Op 1 . - CDS 242541 - 242678 116 ## LDBND_1783 glycerol-3-phosphate cytidylyltransferase 269 96 Op 2 . - CDS 242771 - 242950 199 ## COG0615 Cytidylyltransferase - Prom 242992 - 243051 10.4 + Prom 243100 - 243159 10.9 270 97 Tu 1 . + CDS 243184 - 244653 1358 ## COG1004 Predicted UDP-glucose 6-dehydrogenase Predicted protein(s) >gi|325480382|gb|AEXN01000032.1| GENE 1 21 - 1259 1412 412 aa, chain - ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 14 410 10 412 415 226 33.0 5e-59 MGKNIIADHAKWPRLEDEIFKISGECTKAIEKKGRDKVINSTLGTLIDDQGNIIAFDSVY ETLKNMDKKDIASYGAIEGDKDFLSLLINKCFGPYKPDGHIRSIATAGGSGAVRHTFWSL LDEGDYVICPNWYWPAYQTMCEEYNREFLNYEFLDKNYEFNLKEFTKALDYALEKRDRVL CVFNSPANNPTGFTISDSMWDKILNIIDDRAVEGKFISILLDVAYIEFAGDGSQKKFFQK FGSLKENIITCIAYSMSKSYTAYGLRSGACIIVSSNEEIADSLFDSMKHSNRAIWSNITH AGMNILVDIEKDEKKKKSYADELEFYRVMLEKRARAFVENAKKVGLVSLPYFGGFFISIP CKNSKKVSEKLKEKDMYIVANKEGLRFALCAVSEEKCKISPRLIKEAIDEIN >gi|325480382|gb|AEXN01000032.1| GENE 2 1382 - 1816 484 144 aa, chain + ## HITS:1 COG:BS_yppQ KEGG:ns NR:ns ## COG: BS_yppQ COG0229 # Protein_GI_number: 16079227 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Bacillus subtilis # 6 143 5 141 143 182 63.0 2e-46 MDEKLKQDKLNKLSRLSYEVTQNSCTEKPFSSVYDDFYKDGIYVDIVSGEVLFSSLDKFD SGCGWPSFSKPLEDNIKENEDLSHGMVRTEVKSKNADSHLGHVFNDGPKEMGGLRYCING ASLKFIPKKKLKEEGYDEYLYLFE >gi|325480382|gb|AEXN01000032.1| GENE 3 1854 - 2981 1446 375 aa, chain - ## HITS:1 COG:no KEGG:CCC13826_0178 NR:ns ## KEGG: CCC13826_0178 # Name: iadA # Def: isoaspartyl dipeptidase (EC:3.4.19.5) # Organism: C.concisus # Pathway: not_defined # 1 375 1 377 377 320 49.0 8e-86 MILIKNVKILGENKIKNILIANEKIEKIFEGDCDYPFDEIYDGGGKTLIPGLIDQHIHIT GGGGEGGFETRVPEITLSKLIDAGITTVVGLLGTDSETRSVENLVAKSLALTNEGIKTYS LTGSYAYPSPTITGSIKKDIIFVNQLIGVKIAANDHRDSCLDFKELQRIGAEARVAGMIS GKSGHVTIHMGSGKFYFDQINDALKYSNLPITIFRPTHVNRDKKLYDEALEFAQNGGYID LTSGINKDFPDSLAYKMAKEKNVLDKVTFSSDGFGSWSNYDDEGNLIEIGYSPVDTGIKA IKEIVADGENLEDAIKPFTSNVAKVLKLDKEVGFIKEGYIANLLLLDENLDIDGVISEGK FMKKDKKILKKGSYE >gi|325480382|gb|AEXN01000032.1| GENE 4 2978 - 4420 1760 480 aa, chain - ## HITS:1 COG:HI1107 KEGG:ns NR:ns ## COG: HI1107 COG1757 # Protein_GI_number: 16273033 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Haemophilus influenzae # 8 466 10 468 468 390 50.0 1e-108 MEKKKVKPTTFQAISPLVIMIVLLTIGVGFLKLRAEPIILICASIASIIAIKLGYTWEEL QKGIIEKIASALPATLILWSVGLLIGAWMFSGTVPMIIYYGVQIINPRFLYVSAFLITAV LSTVTGTSWGSAGTIGVAIMGISQGLGMNLAVTAGAVVAGSYFGDKLSPFSDTTNLAPLA AGSQLYDHIKHMLYTTVPAAIVSIIVYLIVGISSKSTGASTESVKIIQSQLSGIYNWNII LLLPVLIMLIGSVLKFPTLPTMIVNSLVSVVIGIFVQGFSLKDGFISMVNGFNVEMTGFD GKIIDDILTLINRGGAVSMTTTTVLVFCSMGFAGVMSTSGMLDVVLDAILTRVKTTFGVI LSTIASCFTVAFVTGNSYLSILIPGELFRKVYLERNLHPKNLSRTLEDSGTVLVPLIPWS AAGAYMAATLGVDTLTYLPWAVLNYMGIVFAIILAFTGIGITKINEKEKEEFLIAEGEKV >gi|325480382|gb|AEXN01000032.1| GENE 5 4604 - 5779 1734 391 aa, chain - ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 3 390 2 390 409 436 58.0 1e-122 MENLKEKALELHKEIQGKISTELKTKLENKDDLSLVYSPGVAEPCKKIHENEDDAYIYTG KANTIAVISDGTAVLGLGDIGPKAALPVMEGKACLFKKFGGLNAVPLVIDTTDTEEIIKF VKQVAPTFGGVNLEDISSPRCIEIETRLKEELDIPVFHDDQHGTAIVTIAALINSLKLVD KKPEDCNVVISGVGAAGSSIVRMLNDFGINDIYAFNSRGILKEGEEYSKDLYNKLAKETN KENKDLTLEEAMADADIFVGVSVPNKVSKEMVKSMRRDPIVLAMANPDPEITYEDAKEAG ARVVGTGRSDYPNQVNNVLAFPGLFKGALSVHATKITEKMKVAAAEAIASLIPDDKISED YVIPSAFDLGVADVVAEAVAKCAREEGISQK >gi|325480382|gb|AEXN01000032.1| GENE 6 5790 - 7034 1454 414 aa, chain - ## HITS:1 COG:lin2328 KEGG:ns NR:ns ## COG: lin2328 COG0114 # Protein_GI_number: 16801392 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Listeria innocua # 1 413 38 452 455 454 56.0 1e-127 MPHSQIMAIASIKRCAAIVNNREEKLDDKKKDLIVDACDRILKGEFDEEFPLTVWQTGSG TQTNMNVNEVISHIANENEKIIHPNDHVNMSQSSNDVFPTAMHLSTYKNLSDKLLKELPK TIEAIKKLEEDNKDIIKTGRTHLQDATPVKLSQEISAWRTCLERDLKVLEEVKEELTYLA IGGTAVGTGINSKKEFGDEMAKELSELYGFEFKSDENKFYQLSSKSALVNVHGTIKALAT DLYKIANDIRFLSCGPRCGISELTIPANEPGSSIMPGKVNPTQVESITMICIKVMANDFA ISMANTQGQLQLNAYMPLIIHSMDNSITLLSKSLRCFREKLLEGLVANEKNIEKNLENSL MLVTSLSPHIGYDKASKIAKYAFNNNLTLKEASHELGYLKDSEFDELVKPEKMV >gi|325480382|gb|AEXN01000032.1| GENE 7 7003 - 7149 249 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848868|ref|ZP_08170378.1| ## NR: gi|325848868|ref|ZP_08170378.1| hypothetical protein HMPREF9246_1217 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1217 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 48 1 48 48 90 100.0 3e-17 MKFRQEEDSLGIVNVPADHFWGAQTERSLENFPQEVEKNATFPNYGYS >gi|325480382|gb|AEXN01000032.1| GENE 8 7162 - 8070 918 302 aa, chain - ## HITS:1 COG:CAC3361 KEGG:ns NR:ns ## COG: CAC3361 COG0583 # Protein_GI_number: 15896604 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 6 302 6 296 312 98 26.0 1e-20 MSEIDLEYIRAILKYGSITSASKKIYISQSALSQHIIRIEKKLGVKIFNRDFKPMKLTEA GLIYKKSLEDIEKLKESTLLKIEEINKLKIGELSIGSTDYQTYFFLSKILNEFNKDYPGI KIKLVEAKTDQLNRFARNGICDFAITYETDKYDDLESINLYRENVYLAMSTKNPLKKDLK GKGQIKWVESKKLLGQNIIRMKKGQNLVLQYQELDKFTENSLKTVLETDSIFIAQKCVRE NFGLAILPESMLKEERDDLIYFKLKEGLSSRTTMINYCKNHKLKRIANIFIDRLKEYAKE EF >gi|325480382|gb|AEXN01000032.1| GENE 9 8079 - 8795 574 238 aa, chain - ## HITS:1 COG:L92665 KEGG:ns NR:ns ## COG: L92665 COG1794 # Protein_GI_number: 15674208 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Lactococcus lactis # 1 228 1 230 240 174 40.0 1e-43 MKNFFVILGGMGTLATTNFLNDLNNAYKPNSDQEYLNYMVLNHATIPDRTSFILKKSKEN PYDFLKEDVESVDKLDPDFYVITCNTAHFFYEDLKKLTKKPIINMIELVENKLNELKKPS TIGLFATEGTIKSRLFTDIIERCGHKALVSSKELQENINDCLYKDVKESGQINFERYHKT LDKMLEEGADYIIIGCTEASYINSEDEKRDSYPIIDSEKELVNESLKLGLKLQKNIEI >gi|325480382|gb|AEXN01000032.1| GENE 10 8799 - 10049 1599 416 aa, chain - ## HITS:1 COG:VCA0088 KEGG:ns NR:ns ## COG: VCA0088 COG1301 # Protein_GI_number: 15600859 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Vibrio cholerae # 1 403 20 418 424 283 42.0 5e-76 MLIGLVVGIALHYIVPDGYFKKSVLIDGIFFLFGQGFVRLLQMLVVPLVFFSIGTGVMQM RDVSQFGRVAIRTLILYLITTAIAIAIALFIAKLLKPGVGMNLAEATKSAAPAAEAEEAP TLIETLVNIIPKNPIESLANGDMLQVIFWAFLSGIVIGKFGQELKLLEDFMNVGNDFMMK VTALVMKAAPIGVFALIARTFTDIGLGIVGPLLTFLGAVLGSMLILIVLAYIPLIALTSK TSPSHFLKKVFPVYTFAFSSASSNATIPLTLSSCDTLGVPREISSFTIPLGATINMNGTA IYQGCAVIFIANAYGIDLTFGNLVTVILTAVLSSIGTAGVPGSGMIMLSMVLSSVGLPVE GVSLIMSVERIVDMFRTALNVTGDVVSTFVSATAEKLLDKERYLSDEKPEMEEVNF >gi|325480382|gb|AEXN01000032.1| GENE 11 10119 - 11537 1843 472 aa, chain - ## HITS:1 COG:CAC0274 KEGG:ns NR:ns ## COG: CAC0274 COG1027 # Protein_GI_number: 15893566 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Clostridium acetobutylicum # 4 464 3 463 465 503 55.0 1e-142 MTKFRREHDSVGEMDILENAYYGANAKRAEENFPITGLKADDKFLDAMVEVKKAAAIENE KLGLISTDQKDAILYACEKLLEGEYRDNFIVDPIQGGAGTSYNMNTNEIIANIANEKLGG GLGVYDKVHPNDDVNKGQSTNDVIPTSGKIALVRYFMELKDECEKLLESFDKKAKEFKDV YKMGRTQLQDAVPISLGQEFNAYHSVIKRDYERMDKAIEALSSVNLGATAIGTGLNADAT YVNEIVDVLKEVTGLDLKQAEDLVDGTQNLDGFLYASSILKTFAVSLSKISNDLRLMSSG PQTGIGDINLPVRQAGSSIMPGKVNPVIPEVVSQVAFAVCGNDTTVTMAVEAGQLELNAF EPVIFYKLFESLRALKGAIYTLRINCIDGITANKELLLEEVEKCVGLVTALAPHIGYEKS SKIAHKAQDTGKTVRELVLEEKLLGETELDKILDFKKMITPGILEEDKLDEK >gi|325480382|gb|AEXN01000032.1| GENE 12 11996 - 12376 389 126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848835|ref|ZP_08170345.1| ## NR: gi|325848835|ref|ZP_08170345.1| hypothetical protein HMPREF9246_1222 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1222 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 126 1 126 126 220 100.0 3e-56 MNSNDYNTDRSFLYGRLIAVYEAYEHLYMDGFIGYAFNNFEKIKRRPEIYLIHLEKEKRN IGRFILKKDTESYNILEKELQNIKKLINDKFDTRSEEYGKSLGPGYIFGYESENRDLINA GVKLFV >gi|325480382|gb|AEXN01000032.1| GENE 13 12376 - 12888 635 170 aa, chain - ## HITS:1 COG:no KEGG:CLOST_1250 NR:ns ## KEGG: CLOST_1250 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 1 158 1 160 166 77 28.0 2e-13 MEELRVGGNYEFLFGREGALFNIKENGLDLTLRFHKPTKDEIEAIKNNDLKYYLTYIDGV IWLVWEFKDAKLIDTPYCATILKNKPVLQDVKDEEGYGLTITLGDCTNGKLEAIRYISLS TKVSKKLKEMVEKQPDFKKPDYYRLCQMQMMKFTTKDIKSRAIIYGKSTK >gi|325480382|gb|AEXN01000032.1| GENE 14 12898 - 13101 243 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848956|ref|ZP_08170466.1| ## NR: gi|325848956|ref|ZP_08170466.1| hypothetical protein HMPREF9246_1224 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1224 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 67 1 67 67 93 100.0 6e-18 MIAKNNLKNIIKTKNINLSELSRQTGMAYSTVYNIVNKDYLDDIKFGSLVKITDALNIKI NEIYKRK >gi|325480382|gb|AEXN01000032.1| GENE 15 13098 - 13613 628 171 aa, chain - ## HITS:1 COG:SPy0190 KEGG:ns NR:ns ## COG: SPy0190 COG1475 # Protein_GI_number: 15674395 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 171 1 171 176 247 70.0 6e-66 MSEYISPVYNVIRVPVEKIQANSYNPNAVAPPEMKLLYESIKQDGYTMPIVCYHLPDEDK YEIVDGFHRYRILKEHKDIYDRECGCLPVSVIDKPIENRMASTIRHNRARGSHSIELMTN IVAELVDSGMSDDWIAKNLGMDWDEILRLKQISGLASLFKDKEFGKSWRPE >gi|325480382|gb|AEXN01000032.1| GENE 16 13610 - 14923 925 437 aa, chain - ## HITS:1 COG:lin1347 KEGG:ns NR:ns ## COG: lin1347 COG3969 # Protein_GI_number: 16800415 # Func_class: R General function prediction only # Function: Predicted phosphoadenosine phosphosulfate sulfotransferase # Organism: Listeria innocua # 6 433 2 434 434 452 53.0 1e-127 MGKIYLDKDVFTATKERINYILDEFEQVIVSFSGGKDSGVVLNILLELAEKRNMLNKVGV YHMDYEAQYQHTTDYVTRTFDSLPKEVKKYWVCLPIKAQCSVSMFQSYWQPWKLDEKEIW CRELPKNAITEENFPFDFDYEISDYDFNIKFGKALSKDKKTAFLIGIRSQESLHRYTAIS KYDDTSTYKGNMFTTKVNENLVNVYPIYDWDVEDIWTANGKFNWDYNHLYDLYYQAGLTL NQMRVASPFNDAAQENLKLYQVIDPNSWGKLIGRVNGVNFTGLYGGTSAMGWRNIKKPDH FTWREYMLFLLDTLPEETRNMYLKKLNTSIKYWTKDGGALPVDIIDEIEGQTDFENLGKP KTKRKYKHEYEVVKFDNYLDEIETSKPNLLPTYKRMCIAILKNDTSCKTLGFGQTKDELS KRRNAIKKYKNIVRGKI >gi|325480382|gb|AEXN01000032.1| GENE 17 14923 - 16359 928 478 aa, chain - ## HITS:1 COG:lin1348 KEGG:ns NR:ns ## COG: lin1348 COG0553 # Protein_GI_number: 16800416 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Listeria innocua # 8 442 3 386 399 125 28.0 2e-28 MIKLKYPLYEHQKRAYDKLKNLKVGSLNMDMGTGKTRTTLEIIKDKYNSGKIDKVIWFCP CSAKINIKKDMEKHILEGKEAFIIVGIESVSSSIALNSFLYEFVRKYRVFMVVDESTKIK NIDTKRSRRIIDLGSECKYRFILTGNPIPKNELDLFGQFYFLDWRILGYKSQWSFNRKHA VFHDEVYTRIVDTKNTDYLAKRIAPFSYRVKKDECLDLPKKIYDTRYFNMGDLEWEDYYI YSDYLLSLVNDWKPETIYRLFNILQGITAGFIYNMTDKGYIYKTGYKDTPETNYRLKAFM DIIEEFQGKVIVYCQYQIEAKTIVDLLNKNYGENSAVLFDGTINTKQRNLNIERFRNGSR FLVANKSCAGFSLNLQFCNQIIYYNNDWDYGTREQSEDRINRIGQEYKCYYLDIICAGTV EEYIMDCLSKKEALGNRFLKELKGNQDKDMKELLKEKIMPKRKRAPNYNLYEILDKEE >gi|325480382|gb|AEXN01000032.1| GENE 18 16352 - 17677 1283 441 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848933|ref|ZP_08170443.1| ## NR: gi|325848933|ref|ZP_08170443.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 441 1 441 441 728 100.0 0 MAQNKYRKYEFEGTFKCGHEGTVTQGGYTREYAEDSADYIFEHEECPECIKKKKELEHKE MAEKAKKDANKLGFPELTGTPKQIQWAESIRKDFYEQFNKFMDELDVYDVLEILERRGER AFVLIPNNRNKLEEFIKSNDIYDLEDEKKLFDEIYDEFKKNIATVTMNFLEDIEYSFIYI NNRDIIKSFYSFANYLILHMDEKYLRTRDEKVEDEVIEELQEEIKEEQLVVPENYNDQIC EIEVREDEINLSTPKDEEIIDFVKSKLYTWDYKNKTWHKYIDTTNNKNDVVAELGNYLLN LGYGVRFNGVGIEVQNMAVKGEFEKENPRKIYISKDRKILRIYWSWEERGFYEEAKRISG AVWSRKNGCMEIPIKSYKQILDFAEINDFIFSSKAMEIIKAYEKLLEDKKQEITKVEKDK KKIEKMLEDFDPDLLKELTDD >gi|325480382|gb|AEXN01000032.1| GENE 19 18023 - 18973 953 316 aa, chain - ## HITS:1 COG:BMEI0565 KEGG:ns NR:ns ## COG: BMEI0565 COG3023 # Protein_GI_number: 17986848 # Func_class: V Defense mechanisms # Function: Negative regulator of beta-lactamase expression # Organism: Brucella melitensis # 11 125 28 149 268 61 33.0 3e-09 MSNSSLVDFRDYSPNHSGTRNEKITKIAIHHTAGVLTAQRIGSVFKSRNRQASCNYGVGS DGKIVLVVDECNRAWTTSSSWCDNRAVTIETSNSQYGGNWPVSDLVLNRLIDLVTDICKR NNIYPCTYTGGTDGVLQKHEWYAQTTCPGPYLGSKFSYIASEVNKRLKGGNYTAKTVSDL YRVRKSWQDSKSQKGAFKNLESAKSLAKKYNYKVYNKNGNQVWPEVKKANTNPYGGVLIK DENWSGITQAVCNVRSAPSTSAEIVATYGVGQEIHYDQVYEGDGYRWISYVGRQSGKRRF VAFRKLSEDTTPWIKF >gi|325480382|gb|AEXN01000032.1| GENE 20 19075 - 19350 338 91 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848916|ref|ZP_08170426.1| ## NR: gi|325848916|ref|ZP_08170426.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 91 1 91 91 147 100.0 3e-34 MNDILIKILVSVGILVLTNVFVYLSNLSKEKIEKIENIKVREASYKLLDIVTKCVSATNQ EFVGDLKNQGKFDRDQQEKAWNSTKEKLIKY >gi|325480382|gb|AEXN01000032.1| GENE 21 19394 - 19756 435 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848998|ref|ZP_08170508.1| ## NR: gi|325848998|ref|ZP_08170508.1| hypothetical protein HMPREF9246_1231 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1231 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 120 1 120 120 179 100.0 8e-44 MEWTMIASALIKNGPLVVIAAIFLKVYMDDTNIKRVERAEDRKLQKENNDKILNLTEKVT QSIETNKGEVRCLGEKLEVHNSSSGASLAEIKQGVNQIQKDVTILNEKIDDIADDIDKSA >gi|325480382|gb|AEXN01000032.1| GENE 22 19765 - 20205 390 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848777|ref|ZP_08170287.1| ## NR: gi|325848777|ref|ZP_08170287.1| hypothetical protein HMPREF9246_1232 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1232 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 146 1 146 146 259 100.0 4e-68 MVEEKELKEVFILDDKGFFIGTTYLDIEEKQEFKFTSLRPDENLIKPKFDGEKWIEGVDK NDLMLNMLFPENDLGVNPNDFLVLNILKILREGGMIMDNTWFFKYCMFCWAERKIDEAYL DMAKKMNMLDDNQIIMIKMTPRIEEK >gi|325480382|gb|AEXN01000032.1| GENE 23 20199 - 22076 1812 625 aa, chain - ## HITS:1 COG:no KEGG:SAK_0759 NR:ns ## KEGG: SAK_0759 # Name: not_defined # Def: prophage LambdaSa04, minor structural protein # Organism: S.agalactiae_A909 # Pathway: not_defined # 1 454 1 466 618 110 27.0 3e-22 MATYSKTLNNGWGTLNLELRQESQNIGNNTSTVYYKLYIKGQGGYGFWNKYHTGKTSVVI NGYTVHSQTGRDFDINNGGTQQLASGTTTIKHNEDGSKSFSFSASLWSTSATGYVSGNFS LSKIPRASSFSLQNSSGTNISSIYAGNDVKISIDKKVSSFTHSVKVSCSGNSETISNKTS SSSITWSNSNNVMTSYMQNLKSMNLTFTLETYDGNTRIGSSSKNLTLNVPSSAGPSISSV EITEANQNKINIIGSSPFYQHLTDLRIKTSGFGEYGASIKSVNVSIGSYNISGQDAIIKD INLTGSQSVKITVSDSRDMSASTIRTINLNPYNLPNISFFNAYRNQSNTKYASARIALTA TVIDNKNPLDVKVDVAEKDSNSWKNVYAATVGNGKFNNTISLGGGFDDYKAYDVRLSIAD KFKRHQALSTIPATSQSLVIGANKPVVGIGKVPTIDKGLEIEGLFKMGDFTTSISGNDIV FKNNKANGSIKFENNLQLEGDIKFPTGNDKKIINLALENGLTGYIKARKDPFGGVNVWGE VTIKDDNVRKKWSTWATLPSGYLPKSLLPFDMYSSKSGYGSYMVQGMAVTEKGNITYIGI NWDQNEPGNGWYNYFNLYFKPEAAW >gi|325480382|gb|AEXN01000032.1| GENE 24 22085 - 26653 4383 1522 aa, chain - ## HITS:1 COG:L82453 KEGG:ns NR:ns ## COG: L82453 COG0791 # Protein_GI_number: 15672466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 251 387 4 140 259 138 51.0 9e-32 MIFFTNRLYETLAVASPDTHKGLVLLDDELNQTIKTGTAIYTGKIAKNDISVEKIEAGSF VFVPNFKNKIIPLEVMEVEESRSYKKIIAEDAGLELLNSDVGDHKMKGTLREHIMATIGN DSDWVIGIDEIGDSRNLTLEYTGVSNQTKRIVQIAGRFGAEISYDFKFEGNEIKEKRINF VKERGKDTARRLEVGKELKDVKRNVSITNLRTAVLGIGKPHKETIKTTKTVKKTVKVNDS SSTTKQTNGKLDAFIGWFQARKGKVSYSMYSRMGPRSYDCSSAVHFAAKHAGLLPSNHYI GSTETLFGMKGKYLDEISRSDIRFGDIFVAGRQGASGGAAGHTGAVLDKNRIIHCTYSKN GIAITPINGYTGGPPVRFFRWRNSGAGNVSVNNAKYWTNSNIAYHDLGWTLNGLNAGQLN NWIRATSPGSPFNGQGNVFMEAQKQSGLDARYILAHAALESAWGRSNIAKRYNNYFGIGA FDNDPNNAKNFSNSGLASGIINGAKWIAKNYYNSSYKQTTLYKMRNNNGVHQYATDPNWH NKIANIMKGSERYTRPAAPSANKTKEVLETVSENKEVEKETNLKGYKYDDGRYFVDKDGR VCDREANAIWSKPNTKGRYLSRVYESEATSQKTLFDECLNQLKKNNQPEVSYDVNPDKIP KDIDIGDRVRIIDHDYSPALYLEARLIDVTTSSTNDYIDRAVFANFVPKTSGIAQRLLNL QSNIQDFKYSFENQPYVMSLESSSGNVFKDDIVDTHLIAKLTKAGIAQSANVDGFIWERV SKYPDKLVVKDEDWNESHKDFNEHFIELTRSDIELEATFVCSAMLDDLAVATASYTIKNL AIGIYKQKEEPDRKLLMWGDVWQWEDGETKFKRIWKGDRWEDTVTKRDLELLELTPGPPG QDGKDGMPGPKGADGKTSYMHFAYADSDDGVVGFTLTATTGKKYIGFYTDFTKEDSKDPN KYEWSKYVGDDGKPGKDGQDGIPGKAGADGKTPYFHTAWANSADGSKDFSVSQAGDKLYI GTYTDFIKEDSSDFKKYTWQLVKGSKGEKGEPGKQGIPGKDGKNINRNYINNSKFKTVTV PKNLYDEAYNIDPSFWDNYSRQEMALSFWFKARESKTYKRNFDVHFRAAPWYQFGTVVYP ENTTENIFYKLHIGSKMMPQNYKAAQIFIRFIEGYSGDIFEIKDLKLEFGNEATDWIPSV NDLKGKDGEKGSPGKDGKTGKIGQNLLRNSNVPVSNKYYSTNTWYLCETPETGETMTFTA KIKLEKDDSIALYNSGGWINLTGWLKVSKSQAYIIYKSTFSWEDKFLYKGQTYEQTNPPT LTLYTHSNGNGANKNQNEVSIEWATLTRGDIPAIEWSPCYADTDDAISEKASEESLQDLQ VHFAMYPTAEELNQNKIDLMKQQAYLDQLKTAIDSNALSLEDRLSIIEANVGAGKLSLEA INTYLHFGEEGVLIGKEGEQVRLRLINNALEITDGSKVVARFANNQTETPNLKVSGAFEF GYHVANKVDLNGNKFTVISPNI >gi|325480382|gb|AEXN01000032.1| GENE 25 26650 - 28293 1273 547 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_0214 NR:ns ## KEGG: HMPREF9243_0214 # Name: not_defined # Def: Cpl-7 lysozyme C-terminal domain protein # Organism: A.urinae # Pathway: not_defined # 180 285 174 281 283 79 38.0 3e-13 MYEVIVDGESLKDLIFVTDVERTMGPFVKGRIVTIHAYILHDILATVDVLNKLLTGEMQE FIFTDQPDRYWKGKVKEDIKVSSSYERAKIDIDIEIPDGVSHAINPKELSFSGRTSLILE NNGSDYAYPTFDFKLKEDTYMVSAVSKDKVFQFGEPLEASPMKQVRIQKEGLVDGYETRR SWVEIDSRFNKLNPTNYDASKIHTRWHSAGDLVQRNKSMPAPSNGKIKVGKWATHWQTGE RIDNWVKGRSFPVAQTKSVRQSKSSKAYLLKNNRVYIGWLLEQDIDGPTSKGFACNNGNS HDMLATFASGQSGWHGPCKSYPINLDCTDFELEAYLNYFVGPANQFGAMYIGVYAGDTPI MAASFSTHYTNRITSIYYDVYDRCYGQINSGLASNFWGKITMKKHGEKFSFSTFNDMSKK SYTKDYNLTNKELKPSHILVWAGKYGSNPQLSELSFVRLKFTGLDGKLWTDKDVTNVPDP RYKFRAGDVVRLEMETNKAYVNGIETLSPISYGSDTVKLKPGQNEIMFDISSDVVPDIDV FYRERFK >gi|325480382|gb|AEXN01000032.1| GENE 26 28294 - 30630 2415 778 aa, chain - ## HITS:1 COG:SPy1448 KEGG:ns NR:ns ## COG: SPy1448 COG5412 # Protein_GI_number: 15675357 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Streptococcus pyogenes M1 GAS # 5 755 2 771 785 614 50.0 1e-175 MANSGTNLGKAYVQIMPSARGISGSISKLLGGEAKSAGASAGLGFGGKLVGVASKVIAAA GIGKAFATSIRAGGALEQSIGGIETLFKGSANIVKGYAKNAYRDAQISANQYMEQATSFS ASLLQSLDGDTKKAAKSADMAIKDMADNSAKMGTNISSIQDAYQGFAKKNYTMLDNLKLG YGGTKTEMERLLSDAEKLTGIKYDINNLDDVFNAIHVIQGELKISGVAADEAKTTLIGSF NAMKASAQDFAGSLALGMDIKEPLSNLIKTTGTFLFGNLIPMIINIGKAIPGALVQAISE VGPVMVEQGKDLMANLGIGLSDSSPLNGLGAKLTSNLQPVINGIKTSLGFLPELFQTVSQ SVMGVVDIIAGGLSKLDFSGIGNLISAYIPALASGFQTFSSIVGPAVQMVVDSFVGLWNA IQPVLSILATALMPIFNIVASFLGGVFKGVLLGVAGTFDILKGVIEFLTPVFNALVSVLN FISPVLQKIAEWVGVAIGLFANLGQAGNGLKTMMKSAWENISNAISTAKNIIHGSITAVS NVFNSLKAGGNSLKAVLQTAWRLITSSISSAVGKITGYVGNIKNVFNSLKNINLFDAGKA IMNGFLKGLKSVWKAITGFVGGIAGWIKSHKGPISHDRKLLIPAGNAIIGGLNKSMVDSF KDVKTNVLSMAGEIYDGFNFNVKPINLSPDISNIDKNILDKKLGANLDFNAYGEYKANRD SKLESLLLDILSLLKIMTEKDDDVYIDGEKVSIMLGRKIDEYKKKKDLYENRRMGVVL >gi|325480382|gb|AEXN01000032.1| GENE 27 30620 - 30976 365 118 aa, chain - ## HITS:1 COG:no KEGG:SP70585_0071 NR:ns ## KEGG: SP70585_0071 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 1 113 9 125 128 86 41.0 3e-16 MICDLAQYYNIYNYEQLAFNKLAVFVFGLPDDSRIMKKLSGLKVDLNTVMTAGVLDRLSM ILYSLAGSKGSKKPETLTSILLGNKKTKEKKPNGYVSGKEFEKRRQEILKRIGENNGK >gi|325480382|gb|AEXN01000032.1| GENE 28 30997 - 31320 356 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848860|ref|ZP_08170370.1| ## NR: gi|325848860|ref|ZP_08170370.1| hypothetical protein HMPREF9246_1238 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1238 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 107 1 107 107 168 100.0 2e-40 MSRNKRRNKPIKINDKIIRGITKSGFRFSVDSEVFKDMEMLELIGEVDDNPILMPKLLEK MFGKKQKDNLYDFVRDDKGSVPVEKISEIVKDIFESKELKNSLSLSR >gi|325480382|gb|AEXN01000032.1| GENE 29 31320 - 31898 912 192 aa, chain - ## HITS:1 COG:no KEGG:SP70585_0069 NR:ns ## KEGG: SP70585_0069 # Name: not_defined # Def: major tail protein # Organism: S.pneumoniae_70585 # Pathway: not_defined # 2 183 21 202 202 210 62.0 3e-53 MADVNNVSYGKPLTDGAISTAPLGSSLPTDATTKLDTKFKSLGYVSEDGITNENSPESEK TKAWGGKTVLVSQTEKPDTYQFTLIEVLNLDVLKVVYGDENVSGTLKTGITIKANAKPMQ ARCFVIETLLNRDTIKRMVIPNGVISEVGEISYKDDEAIGYETTIECLPDKDGNTHYEYI KGAEGTSSGEAS >gi|325480382|gb|AEXN01000032.1| GENE 30 31910 - 32257 360 115 aa, chain - ## HITS:1 COG:no KEGG:SDEG_1122 NR:ns ## KEGG: SDEG_1122 # Name: not_defined # Def: phage protein # Organism: S.dysgalactiae # Pathway: not_defined # 2 113 1 111 111 97 50.0 2e-19 MIIEEILKDFLKEKLKLDVFLEYPKNYKKDDFVLIEKTSSSNENKLLSATFAIQSYGESM YKAALNNEKVKEAMLFLANDKRIGSIKLNSDYNFTDLEMKRYRYQAVFDIYYYKN >gi|325480382|gb|AEXN01000032.1| GENE 31 32254 - 32490 374 78 aa, chain - ## HITS:1 COG:no KEGG:SpyM3_1109 NR:ns ## KEGG: SpyM3_1109 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_M3 # Pathway: not_defined # 1 78 12 89 89 71 53.0 9e-12 MSKVKFVLNRQGVSQLLKGKEIQTVLESYGSEIKSRAGEGYDMNSRVGKTRANTMVYADS IRAKRDNLKNNTLLKAMK >gi|325480382|gb|AEXN01000032.1| GENE 32 32487 - 32822 325 111 aa, chain - ## HITS:1 COG:no KEGG:LLKF_1074 NR:ns ## KEGG: LLKF_1074 # Name: pp145 # Def: phage protein # Organism: L.lactis_KF147 # Pathway: not_defined # 3 108 7 112 115 118 55.0 7e-26 MKIHGITVELIQKIKVGEDPFGGDIYQEKPIKVDNVLVTPTNSDDIINSQNLYGKKAVYT LGIPKGDENIWEDNEVLFFGQRFKVFGKVTQGIDNLIPLSWNKKAYVEVIE >gi|325480382|gb|AEXN01000032.1| GENE 33 32779 - 33201 527 140 aa, chain - ## HITS:1 COG:no KEGG:LLKF_1073 NR:ns ## KEGG: LLKF_1073 # Name: pp144 # Def: phage protein # Organism: L.lactis_KF147 # Pathway: not_defined # 3 129 4 131 132 167 66.0 2e-40 MEYCSVDDVISLWRPLKNDEILRVKELIPVIENSLRVEADNVGKDLDEIAKASEPYRSVL KSVVVDVVARTLMTATDQEPMTQYSESALGYSFSGSFLVPGGGLFIKKSELSRLGLRRQR YGVIDFYENPWNYSGIDTED >gi|325480382|gb|AEXN01000032.1| GENE 34 33203 - 33469 409 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848928|ref|ZP_08170438.1| ## NR: gi|325848928|ref|ZP_08170438.1| hypothetical protein HMPREF9246_1244 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1244 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 88 1 88 88 108 100.0 9e-23 MFEYINTKTGARMSSPDVLYGENWKILGEEVIEEVEKVENEIKEEKEIEDKSSDEITKDD IMAQLDALGIEYNPKAKKDELYKLMMGE >gi|325480382|gb|AEXN01000032.1| GENE 35 33469 - 34365 1337 298 aa, chain - ## HITS:1 COG:no KEGG:M5005_Spy_1187 NR:ns ## KEGG: M5005_Spy_1187 # Name: not_defined # Def: phage structural protein # Organism: S.pyogenes_MGAS5005 # Pathway: not_defined # 4 296 6 302 303 370 62.0 1e-101 MVLSRGDFFDEILVNDLMNKVKGNSSLAVLSKQTPISFNGNKEFVFSMDKEVDIVAEGGQ KSEGGISLDTVIMVPLKIEYGARVTDEFLYASKEYKLNILKAFNDGYAKKVAKGLDLMAF HGINPRTGQTSTVIGDNYFDKKVTQTVVFNAKNPDENIESAVGLIRGSEGDVTGAAFDPT FATSMAKQTVDGKEGTPRLFPELRWGANPGSVNGLKVDVNATVGKGTKDKAIVGDFSNMF KWGYAKQIPFEVIKYGDPDNSGKDLKGYNQVYLRCETYLGWGILDPNHFAIIKEGESS >gi|325480382|gb|AEXN01000032.1| GENE 36 34368 - 34850 653 160 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1298 NR:ns ## KEGG: MGAS10750_Spy1298 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 158 47 198 199 82 40.0 5e-15 MSEFKVIESQEEFDARIKDRIERAKEKAIEDYKTEIKKTIDDLKSENSSLKNEVAGYKES LEEVKGKDETIKGLNEKISAFERAEVKRNIALEYGLPFKLADKISGDDEDSMKKDAEVMA KYFSESKKSYEPPLKTYENKVDEKDQALKKLLDGLDLEGE >gi|325480382|gb|AEXN01000032.1| GENE 37 34934 - 36322 1440 462 aa, chain - ## HITS:1 COG:no KEGG:LLKF_1069 NR:ns ## KEGG: LLKF_1069 # Name: pp140 # Def: phage terminase # Organism: L.lactis_KF147 # Pathway: not_defined # 3 462 6 469 469 567 58.0 1e-160 MNRLGKQTPTQKISQGYKKSDYKKCVELYEGSKRKTMEWQRLILKDLLAINKDGLWTHTK CGYSLPRRNGKSEILVMRELYAILKGEVVNHTAHRTFTSHASWERLCMVLDDANIEYKSL RATGRERVEIPETGGRVEFRTRTSTGGLGEGFDLLIIDEAQEYTDDQESALKYTVTSSKN PQTIMCGTPPTPISSGMVFVNFRKQCLTSRPNNAYWAEWSVPEMSDIHDSELWYKTNPSL GTIFTERSIEDEIGSDETDFNIQRLGLWISYNQKSAITEKEWQRLKLKSLPILTGEMHVG IKFGNDGTNVSLAVACKTLSKMIFIEAIDCQNVRNGDNWIIDFLVKTKPKSVVIDGASRQ FILQDELKEARVKNIILPTVKEIINANSLWEQGIFDKSIGHMDQPSLSQVVTNCEKRNIG SSGGFGYKSQFDDMDISLMDACLLAHWAVKEIKSTNKQKIIY >gi|325480382|gb|AEXN01000032.1| GENE 38 36438 - 36731 505 97 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0550 NR:ns ## KEGG: HMPREF0868_0550 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 97 72 168 169 95 50.0 4e-19 MLGLRTQENNKFIKFFKLVQDEASKVNKVFFLDFGECEDIDFMDMEVDSLFGWLIPEEIV DKFKVKFEKEKDLSGWDDYCVWVIPEIKDNKLNIVFE >gi|325480382|gb|AEXN01000032.1| GENE 39 36700 - 37758 961 352 aa, chain - ## HITS:1 COG:no KEGG:SP670_0075 NR:ns ## KEGG: SP670_0075 # Name: not_defined # Def: GP35 # Organism: S.pneumoniae_670-6B # Pathway: not_defined # 6 269 2 268 463 260 47.0 8e-68 MKNEEVKDIVPGIFDEIKKSFDLKTKESHIIKDKLKALKNKKANYKDANDFAVEIGKILS DTFQDKIKTGDLPDGKMYYNIAKRLIEPNMVRNHDLVSEYSKEVQSILNKKANISIKAQK ADLNQDRIDKLIDKITGYDSYEDGKWLLKEPVINFTQAVVDETIKKNANLHYKSGLNPKI IRKEHGNCCDWCKEIVGTYSYPDVPEDIYRRHRHCRCTVDYYPGDGKKQDIWSKKWKNVN EDDKIKEKIELSNKTNFSINSKQFGKKSNKHMKDYGLDVSSKVDRKKFVRIINDIVENHD SVIRNINWRGQTNTVIAYVKGKDVVLVDKNNEFITILKGGINNARIKNAGKQ >gi|325480382|gb|AEXN01000032.1| GENE 40 37748 - 39004 1403 418 aa, chain - ## HITS:1 COG:no KEGG:LLKF_1067 NR:ns ## KEGG: LLKF_1067 # Name: pp138 # Def: phage protein # Organism: L.lactis_KF147 # Pathway: not_defined # 2 418 3 422 474 541 64.0 1e-152 MEYDLEFLRRKLNSFEPMVRKRYLYYDSKFRENDFGITIPPHIRQMYRSSLGWCAKAVDS LADRLVFKEFSNDLFDLNEIFNLNNPDIFFDSAILSALISSCCFIYISMGNEGYPRLQII EGSEATGVIDPITGLLKVGYAVLDKTENGNPKTEVIFLPDRTEYYLDGKIYSNVKNPAGV PLLVPIIYRPDAVRPFGRSRISRASMYFQAHAKRTLERADVTAEFYSFPQKYVVGLSQDA EPLDKWKATVSSMLQFTKDDEGDSPKLGQFSQPSMSPFTEQLRTLASGFAGETGLTLDDL GFITDNPSSAEAIKASHETLRITARKAQRCFGSGFLNVGYVARCLADGYPYLRNQFYEIK PSWYPVFEPDVTTLSGIGDASIKINQAIPGFFGKDNLSDLTGFNASKEPPKVEAENEE >gi|325480382|gb|AEXN01000032.1| GENE 41 39103 - 39459 352 118 aa, chain - ## HITS:1 COG:SPy1468 KEGG:ns NR:ns ## COG: SPy1468 COG1403 # Protein_GI_number: 15675375 # Func_class: V Defense mechanisms # Function: Restriction endonuclease # Organism: Streptococcus pyogenes M1 GAS # 1 114 1 114 114 148 61.0 2e-36 MAKERLDRTGPHRATFERNKKIILKTQNVCGICGKPVDLSLKAPNPLAPCIDHIIPVSKG GHPSDIDNLQLAHWSCNRAKSDKLFKNKVNIEPEVIGNRNLPWSTDWTKYKPKKFKGM >gi|325480382|gb|AEXN01000032.1| GENE 42 39703 - 40140 220 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848975|ref|ZP_08170485.1| ## NR: gi|325848975|ref|ZP_08170485.1| hypothetical protein HMPREF9246_1252 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1252 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 145 1 145 145 251 100.0 1e-65 MQSFYVNLVKEKLKRYFYARDFISRAERKIDELNSLKEGKIVVFYGDKPPFGGFEDKDKL LNILAEIDLLETNIRENKKIIEELDYAFKSMSEIQRDITLEIYGRPYKYNKIQNLKDKYH YEKAHLYNLANEGLVHIALSLFGKY >gi|325480382|gb|AEXN01000032.1| GENE 43 40153 - 40557 536 134 aa, chain - ## HITS:1 COG:HP0865 KEGG:ns NR:ns ## COG: HP0865 COG0756 # Protein_GI_number: 15645484 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Helicobacter pylori 26695 # 12 133 18 141 145 80 33.0 1e-15 MIKYKASYILSKKDGDIGYDVRSTEDRILEPMETAIISTGVFLELDDGFYADLRARSGNS SKGLICNLGLIDTSYRGEIKTSITNLTGNDYEIRKGDRVGQLVFRKESMVDLEKVLEIDC NTDRGSKGFGSSGR >gi|325480382|gb|AEXN01000032.1| GENE 44 40550 - 40711 280 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696834|ref|ZP_03304962.1| ## NR: gi|212696834|ref|ZP_03304962.1| hypothetical protein ANHYDRO_01397 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01397 [Anaerococcus hydrogenalis DSM 7454] # 1 53 1 53 53 62 94.0 1e-08 MNNTSCLDKLDFDLDLIINVLRDDFGFKDLDIDCFLCLLEFKIDDNFEEVFND >gi|325480382|gb|AEXN01000032.1| GENE 45 40704 - 41090 274 128 aa, chain - ## HITS:1 COG:no KEGG:Apre_0813 NR:ns ## KEGG: Apre_0813 # Name: not_defined # Def: endodeoxyribonuclease RusA # Organism: A.prevotii # Pathway: not_defined # 6 124 2 122 125 113 52.0 2e-24 MNLIKKIVWHGRPITKKNHQRIVGRGKRKWIVPSKEFINYQNICLYQVKKKDKLQLSTPI NLKCLYYMPTNHRVDLVNLLEATCDILVEAHVIGDDNSKIIKSHDGSRVLYDKDSPRVEI YLEEFIDE >gi|325480382|gb|AEXN01000032.1| GENE 46 41144 - 41332 194 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848739|ref|ZP_08170249.1| ## NR: gi|325848739|ref|ZP_08170249.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 7 62 1 56 56 95 100.0 1e-18 MEKLYFMVTADELEWPIAVGRTIEELARDSGKSEMAIYFKMRNQKLGRRQTGYKVEVVEV EK >gi|325480382|gb|AEXN01000032.1| GENE 47 41340 - 41786 575 148 aa, chain - ## HITS:1 COG:L0301 KEGG:ns NR:ns ## COG: L0301 COG0629 # Protein_GI_number: 15673403 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Lactococcus lactis # 1 148 1 141 141 108 38.0 4e-24 MINNLTLVGRLVKDPELRYTRSNIGVCSFVLAVDRELSKEKREEAKANNYPTADFPRVVV WGKMGEVCSKYLQKGSLVAIVGKIQTGSYKDKDGKMVYTTDVRADRVRFLDSKASGDKDK ADSHNNITSIDDYFSDDFVEIEDDNIPF >gi|325480382|gb|AEXN01000032.1| GENE 48 41779 - 42024 411 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848978|ref|ZP_08170488.1| ## NR: gi|325848978|ref|ZP_08170488.1| hypothetical protein HMPREF9246_1258 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1258 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 81 1 81 81 128 100.0 1e-28 MKKKLNNIKDMVISIEFDPVEIGFIQASIDIYLKKAKEKLGDKDDSVNLALIELMGKTCL GKFDKAIDELEKIYEWGEIDD >gi|325480382|gb|AEXN01000032.1| GENE 49 42041 - 42238 195 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848966|ref|ZP_08170476.1| ## NR: gi|325848966|ref|ZP_08170476.1| hypothetical protein HMPREF9246_1259 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1259 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 108 100.0 9e-23 MKKWQLDRAAYHWAVTFLPTYIAELKKRIKKADDDLVKIGLNIKLDKAEEDFTEISKMYE KLIDG >gi|325480382|gb|AEXN01000032.1| GENE 50 42235 - 42372 84 45 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848831|ref|ZP_08170341.1| ## NR: gi|325848831|ref|ZP_08170341.1| hypothetical protein HMPREF9246_1260 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1260 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 45 15 59 59 80 100.0 5e-14 MGFGRPKGIYVSIKQDEKSTIICVKEYQFDLREIGFCLKEVEEEE >gi|325480382|gb|AEXN01000032.1| GENE 51 42423 - 42602 154 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848907|ref|ZP_08170417.1| ## NR: gi|325848907|ref|ZP_08170417.1| hypothetical protein HMPREF9246_1261 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1261 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 59 1 59 59 70 100.0 3e-11 MPVIIKYLIFMILVSDFCYFGFKRFGKIKLDFSRFDFGLIFGQVSVLAFVGIIVYRFFG >gi|325480382|gb|AEXN01000032.1| GENE 52 42602 - 42790 194 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848794|ref|ZP_08170304.1| ## NR: gi|325848794|ref|ZP_08170304.1| hypothetical protein HMPREF9246_1262 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1262 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 62 1 62 62 107 100.0 2e-22 MFLKIKSIDDSTIYLNTDFFRICRVEVVDGYAHLEIINRNGEEEVFDDIEYSGDFKNFVE GL >gi|325480382|gb|AEXN01000032.1| GENE 53 42800 - 43675 581 291 aa, chain - ## HITS:1 COG:no KEGG:CLH_1752 NR:ns ## KEGG: CLH_1752 # Name: not_defined # Def: phage protein # Organism: C.botulinum_E3 # Pathway: not_defined # 1 259 1 261 313 156 39.0 1e-36 MAENPNYYSILPANVRYDDRLKANEKLLYSEITALANLHGYCYASNSYFAKLYGVKKDTV SGWINKLCKFGYLSTELIYKKNSREVESRKIYIVPNSDKKDLGENCPDPIPEKEDTPPIN IGETYPINIGEGTRYKSEDNNTRYNTTSINNLLHDDEDENLHNLEKVLDRVMNTWNKLDS NIPSLKSISPNTKRYRLTKLCLDEYGIDYLLEAINKINYSKFLQGYSDRSDFVINYDWFI DPNNFSKVSEGNYSDSKKEAVRSKRQGDCKEAIDLAERMRQERFKRILGQG >gi|325480382|gb|AEXN01000032.1| GENE 54 43687 - 44157 488 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848964|ref|ZP_08170474.1| ## NR: gi|325848964|ref|ZP_08170474.1| hypothetical protein HMPREF9246_1264 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1264 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 156 1 156 156 255 100.0 7e-67 MEIWKDLLDRGWRFNADVISSFDVPRYEFNRFRMRIRDSYPKFYRDNVFKREDRRLLLSP KMVEIMKDIYDSHRWKNERVCDDDFAKALSKFDESNDKSFKEESFYKIDFNGEDFETIRG MVDEKISHLDDEIRVLNDYKANLLEFRDKVVYLSEN >gi|325480382|gb|AEXN01000032.1| GENE 55 44129 - 44347 291 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848858|ref|ZP_08170368.1| ## NR: gi|325848858|ref|ZP_08170368.1| hypothetical protein HMPREF9246_1265 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1265 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 72 1 72 72 142 100.0 6e-33 MKIENQAKFMKNLVNVDDKDVISLGEYFNGVGSGLYPRKEACHEDCFDMHFLVLCELKRR GIYDGDLERFIG >gi|325480382|gb|AEXN01000032.1| GENE 56 44511 - 44762 359 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848796|ref|ZP_08170306.1| ## NR: gi|325848796|ref|ZP_08170306.1| hypothetical protein HMPREF9246_1266 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1266 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 83 1 83 83 146 100.0 5e-34 MENKKVRRIKKRSQVFEMLDGKKIDDACVRFTAKPERERMRDKFLGIFVVGLCMTLAIAG PSELIRVSGIVAMFLGSLMAFLA >gi|325480382|gb|AEXN01000032.1| GENE 57 44778 - 44966 168 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848871|ref|ZP_08170381.1| ## NR: gi|325848871|ref|ZP_08170381.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 62 1 62 62 90 100.0 3e-17 MEERLTVLKEYMTLSDMKEYFQFKDSKTFRDWEQKGLKTIKLTESSKLYKACDIREFLDN LK >gi|325480382|gb|AEXN01000032.1| GENE 58 45059 - 45415 446 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848905|ref|ZP_08170415.1| ## NR: gi|325848905|ref|ZP_08170415.1| hypothetical protein HMPREF9246_1268 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1268 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 118 1 118 118 184 100.0 2e-45 MLTIQTYTLLKDLKKLDKPVIDTIDKVNNEIGIFDIKDASLIELGYPFPPKDKKLIKIYK YDEYKYLLEKHYIVIYTNPFISFTHLGYRIKQINAINLCWQLFFSVVIPFIVAYYTSK >gi|325480382|gb|AEXN01000032.1| GENE 59 45416 - 45652 58 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGSFSKFVMLGLIIFIFIVLHYLSQMIDWDEYTPYGDCPDFSSWFLYNQNTLEFQVFRLI CIIVLSFSVSILTKKFNL >gi|325480382|gb|AEXN01000032.1| GENE 60 45719 - 45949 323 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848949|ref|ZP_08170459.1| ## NR: gi|325848949|ref|ZP_08170459.1| hypothetical protein HMPREF9246_1269 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1269 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 76 1 76 76 124 100.0 2e-27 MTDEYLLNNKIKDSGYRLGYLAGKLNLSRAGLYNKINGKTEFLASEIQALSDILKLDGKE REEIFFNKKVDKLSTN >gi|325480382|gb|AEXN01000032.1| GENE 61 46092 - 46598 537 168 aa, chain + ## HITS:1 COG:no KEGG:Closa_0842 NR:ns ## KEGG: Closa_0842 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: C.saccharolyticum # Pathway: not_defined # 8 120 7 119 160 83 41.0 4e-15 MATLSNNIKKRRNELNMTQEELAKKTGYKTKGAISRIEKGERDLSQSQIEIFANALSTTP SYLMGWEDDKKSENIKPISPLSPEEKQILDPYKQLNPEGQEKAISYTWDLVDSNKYNKDN QTKIPTRQEMISYLSDMEMAAIDGELNIHTMTDENLYSFYKMIKEDDK >gi|325480382|gb|AEXN01000032.1| GENE 62 46595 - 47008 462 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848815|ref|ZP_08170325.1| ## NR: gi|325848815|ref|ZP_08170325.1| putative toxin-antitoxin system, toxin component [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative toxin-antitoxin system, toxin component [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 137 1 137 137 228 100.0 1e-58 MNKRDIDVIVNKLIKKAGSNDLKDIISYLDIKIKKYDGKSFYLKNKNNKYIYLDINTPEE KQDFALAHELGHSILHNSEIGQSFIYRVKSQQIENEANYFAFKILGKEIDPTYNFTINQY ANMLNVNEEVIEYVVEG >gi|325480382|gb|AEXN01000032.1| GENE 63 47011 - 47658 498 215 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848874|ref|ZP_08170384.1| ## NR: gi|325848874|ref|ZP_08170384.1| hypothetical protein HMPREF9246_1272 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1272 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 215 1 215 215 352 100.0 1e-95 MKNIKIKHLIIYLIGGFFLTAIISGISENLGAILLLIYLISIAVLIFVYIKNKLSENTKN SLKNLLNNLSNNQKMNKNINQPTSQSDNNYFELVGVYYYTENLEDFLKDHENPYWKKLDK SNLNRVYKYHRLKDQIIKIEREPTNKFDKEAIRASIQGKTIGYIAHDDKKRFLKQARLPY FVKADISGGPCKDLDPFTNKYGPTENYGYHIRFYI >gi|325480382|gb|AEXN01000032.1| GENE 64 47761 - 48822 1113 353 aa, chain + ## HITS:1 COG:L55605 KEGG:ns NR:ns ## COG: L55605 COG0582 # Protein_GI_number: 15673415 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 1 350 1 358 359 174 34.0 3e-43 MKITKYQKQNKNFYKFQVRLGEKVTTRAGFKTRNEAIFAYTKLLEEYEEEQEGNISYQKA YIQWLEIYQTKVKETTYEACTSIYEIHILPVFGQTKIQEITVQDCQKFALSLKDYVKGKE YFGYAKRIIDFAIKMNYTKKNPFNNVILPEFKKGKKQINFLTIVEVNTLLDYYKNNQYWY TLFRLMCYTGLRRGEILALTWDDIDFKNKTLTVNKTLSIGEYKKIVLSSPKTESSIRTID LDDKTILELQKLKIQSKYKLIFPNKKGKYSRLSNIADKLNKAIKETNIKKIRVHDLRHTH ASLLFASGASIKYVQTRLGHADVKTTLNIYTHVTKDTKEKDLSNFVKYMENKA >gi|325480382|gb|AEXN01000032.1| GENE 65 48961 - 49860 1020 299 aa, chain - ## HITS:1 COG:L37916 KEGG:ns NR:ns ## COG: L37916 COG1126 # Protein_GI_number: 15673778 # Func_class: E Amino acid transport and metabolism # Function: ABC-type polar amino acid transport system, ATPase component # Organism: Lactococcus lactis # 1 237 5 242 244 281 58.0 1e-75 MIKVENLKKSFKEKEVLKGIDLEINKGDILAIIGPSGSGKSTLLRTLNKLEQKTSGNIYF ENKNIDDLDINKLREKVGMVFQQFNLFSNMTILENLLVAPLNTKKMQKNQAEKKALDLLE KIGLSDKKNSYPKELSGGQKQRIAIIRALMMEPDLILFDEPTSALDPEMVKDVLDLMKDL ANDGMTMAIVTHEMEFAKQVSNKIIIMDDGEIVEESQNPKEFFENPKEKEVRNFYQKFYK KIDKAIIYWYYIKVACRIGGIGRRARLRILCPILGRGSSSLLSCTIEKLYKDIKGYWQI >gi|325480382|gb|AEXN01000032.1| GENE 66 49853 - 50560 892 235 aa, chain - ## HITS:1 COG:FN0802 KEGG:ns NR:ns ## COG: FN0802 COG0765 # Protein_GI_number: 19704137 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 4 229 3 229 236 139 39.0 5e-33 MQSFLQAIEKNLIQDNNYKYLIDGLKTTLSVTLISLILALIFGMTIAIIKDYDKNLDKND KGLKVTLIKILSKILNIFVTIVRGTPSTIQLLIIYNVILANTDSLFLVAVVTFTINSSAY MSEVFRGGINSVDKGEIEAARSLGLSYEKTAKLVVIPQAMKNSLPALGNEVITLFKETSI SGFIGLVDLTRGAGIIISRTFSAAIPYLAAALIYLLVVLLLEKIFKKLEERMAHD >gi|325480382|gb|AEXN01000032.1| GENE 67 50564 - 51370 1194 268 aa, chain - ## HITS:1 COG:TM0593 KEGG:ns NR:ns ## COG: TM0593 COG0834 # Protein_GI_number: 15643359 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Thermotoga maritima # 45 268 23 246 246 157 44.0 2e-38 MKNLKKILLAFVTTTLLVSCSGKNQKGNSNESDLSNNSNKKVSSEIVSDGVIDLGTSADF PPYEFFDDNNKIVGIDAEIAQEIGKKLGVEVKIKDMDFSSIIASIESGKLDGGIAGITAN EDRKKNVNFSDTYGKSVQKVIVKKDSSFKNPEDLKGKKVASQLGSTGETAAKDTYGEENV QSFSKNMDAIVALNNDKVDAVVLDDQVAEKFAAANKDLKVLDKELAKDEYAIALDKKNDK LLEEVNKAIDELKKDGTIDKIFEKYMDK >gi|325480382|gb|AEXN01000032.1| GENE 68 51721 - 52992 1545 423 aa, chain - ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 7 421 2 418 422 444 51.0 1e-124 MTKKFTKFDTLCAQAGWDPKNGESRIPPISQSTTFKYDSPDTVANLFDLKEEGYFYTRIA NPTVDALEKKIAALDGGLAAVATSSGQAANLLAVLNIAKSGDNIVAVNNIYGGTFNLLGN IIKNFGIETRFVDSNDLDQLKKAIDSKTKLVFGETLSNPRADVIDISSYADVAHKNNIPL ILDNTLATPALVRPIDFGCDIVTYSSSKYLDGHAAAMGGIIVDSGNFDWNKGDFPYLTEA DESYHGLVYTKQFGKAAYAARLRTVGLRDIGSIISPFNAYLTFLGLDTLSLRLKKTSENA LEVAKFLEKSDKVESVNYAYLQSSKNYELSKKYLKAGGGLISFEIKGGREKAKKFIEKLE LLSLCVHVADLRSYALHPASSTHRQLSDDQLKEVGIGSNLIRLSIGIEDVDDILLDIKNA LED >gi|325480382|gb|AEXN01000032.1| GENE 69 53346 - 57605 5315 1419 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 2 654 4 658 663 750 57.0 0 MNLHMGLDVGSTTVKIVITDDKFNTLYSVYRRHKSDVKQTVTDVLNESYDRFKDDFLTVN VTGSGGMFVEKYLGINFVQEVIAETRAIKEFIPNTDVVIELGGEDSKITYLKGSVEQRMN SICAGGTGAFIDQMAALLDTDAKGLNELSKNYKKIYPIASRCGVFAKTDIQALMNQGASR EDIAISVFQSVVNQTISNLACGRPIKGNVTFLGGPLHFLKALRDRFIETLGEEENNFYIP DDAQTYVAKGAAILSKDEKPISYKSLIKSLREDKKVDMEMTKKMDRLFDNEKDYEKFKKN HKTDLVKYKDIEDYDGEIFLGIDAGSTTSKIVLISENNEILHQDYRMNLGKPLEVVISML KDAYKKISPKAKIVSSGICGYGEEFIRKALHIDNGEVETIAHYSAAKFFDPEVDFILDIG GQDMKAMHIRDGIIDSIQLNESCSSGCGSFLSTFAASVGLSVEEFQKKALFAKEPADLGS RCTVFMNSKVKQAQKEGADVSDIAAGLCYSVIKNAIQKVIKVRDPKSLGKNIVVQGGTFY GDAILRAFEKLSSRSVTRPEISGLMGAMGMALISKEKSTGHSKILSEAEIDNFTYTQKSA RCGRCTNNCSLQINIFPDGSRFITGNRCERGAGVKQEETLADLNMYKFKNKLLFDRKTLG EKNILGKVGLPRVLNMYEDYPFWHEFFTSLGFDVVLSDKSNREIYEKGIATISSETACYP AKITHGHIENLLEKDIDILFYPAIFYEYKQFDKAQNHMNCPVVSGYPDVIENNVDGLKNV KYMAPYLSFESEKIISDRLVEIFEGYEHDGFVLKKNQIINAVKNAWVKQEEYHEDIRKKG REILEYVHVNNEKAIVLAGRPYHIDPEINHGIPELIESMRIPVLSEDALAYSTEDLENKT RVLDQWSYHARLYRAAEFVGKDPCLQLVQLNSFGCGLDAVTTDQVQDILEANGKIYTLLK IDEVSNLGAVKIRIRSLIQALSQQNDEDIHLRKKEDKISYENHEFTKEMKDAGYTILAPQ MAREHFQILEKLFNGSGYNIEFLNKVDEKVIDNGLKYVNNDSCYPSITVVGQLMEAVNSG RYDPNKLALLMTQTGGACRASNYVGYIRKALKDAGYPQIPVIALSAQGIESHSGFDLKKV SNIPLLINALRSLLLGDLINRVSNATRPYEKEKGSVNKLKEKWIEICRDNIVKMSSKTYR EIINDIVEEFDNVEILDIKKPKAGIVGEILVKYLQEANNHLQDTLEEEGAEVIVPDLMDF FMYCLKNTEIKKDLYGKSPWTAFFGKTVINTIEIYRKPIRKALKNSKRFSEPVYINDVVD FAKEVTSIGNQAGEGWLLAGEMVELIHQDAPNIVCIQPFGCLPNHITGKGVMKKIREIYP QANIVAIDYDPGASEVNQINRVKLMMGQARENLKENVKS >gi|325480382|gb|AEXN01000032.1| GENE 70 57931 - 58536 697 201 aa, chain - ## HITS:1 COG:PA3846 KEGG:ns NR:ns ## COG: PA3846 COG1335 # Protein_GI_number: 15599041 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Pseudomonas aeruginosa # 26 194 8 176 180 112 36.0 5e-25 MEREIGNFYIEGYNFDTKTYDNKENTLLLVIDLQEKLMPAIFESEKIVRKSSALLKVFDM YGMKKIATEQYPKGLGQSLGDIKQYLDDDHIFSKTSFDAITDEVSSYLKENKITNVVITG AESHICVFQTVRRLLFEGYKVFVVEDAISSFNKEQKDLGLKAISDMGASLVNTEMLMFDL ASDAKDENFKEISKMVKDLRK >gi|325480382|gb|AEXN01000032.1| GENE 71 58521 - 59444 872 307 aa, chain - ## HITS:1 COG:FN1142 KEGG:ns NR:ns ## COG: FN1142 COG1242 # Protein_GI_number: 19704477 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 6 304 3 302 304 268 46.0 8e-72 MEINKKRYRDLDSYFKRKFNKKIIKIPLDGGFTCPNRDGKISKLGCIYCSENGAGDFTKY DDLDKQIDFQINRLKKENRKEGYMAYFQNFTSTYGNIQKMKKLFYGAINNPNIMGLSIAT RADCLSDEVIALLDDLNKKTFLVVELGLQSVNEKSIEFINRGYSHKEFDQDLLKLKEKNI KTLAHIIIGLPNEDIDDFLNDISYINKRKFWGIKVHNLYIEKGSRIFDYYLKNQNDFTMT LDQYVDYVILILENLDPNIIIQRLTGDGRRDKIVWPIWSKNKARVLSTIDKKLKDEDKKQ GDLWKEK >gi|325480382|gb|AEXN01000032.1| GENE 72 59529 - 59753 353 74 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 140 90 5e-32 MRRNFRPRKKVDPFVKDPSKVIDYKDIDTLKRFISDRGKILPRRVTGLNAKHQREITRAI KRARQVALLPYEDN >gi|325480382|gb|AEXN01000032.1| GENE 73 59770 - 60300 545 176 aa, chain - ## HITS:1 COG:lin0097 KEGG:ns NR:ns ## COG: lin0097 COG0629 # Protein_GI_number: 16799175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Listeria innocua # 1 152 2 145 159 109 43.0 3e-24 MNKVFLIGRLTKDPDLRYTQQGQAVVSFSLAVDRGLSKQKRQEMESMNRPTADFPRITVW GVQAENVSRYLKKGNQCAIDGRIQTGSYQDKDGKMVYTTDVVADRVEFLESRSEGQYQNN NNPMNQDNGFGDMNQDRSYNNSNNFQQNNNQNMNSNNDDFFDDDFTEIEDDGRIPF >gi|325480382|gb|AEXN01000032.1| GENE 74 60301 - 60585 365 94 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172] # 1 94 1 94 94 145 73 2e-33 MNNYEAVLIYKPEVSDEERNKSLEIFKGIIADNGEVESVDDWGKRKLAYEINYIKEGYYY IVDFKASGDHIKEFERRLRISDLILRFMVIRKED >gi|325480382|gb|AEXN01000032.1| GENE 75 60684 - 61616 1493 310 aa, chain - ## HITS:1 COG:BMEII0898 KEGG:ns NR:ns ## COG: BMEII0898 COG3191 # Protein_GI_number: 17989243 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Brucella melitensis # 4 298 7 311 335 244 47.0 2e-64 MYKGYITDIEGIKVGHAQNFDAGTGLTVLIPPRGNTASVDVRGGGPGTRETDLLNPVNTV SEVSAIVLSGGSSYGLACSIGVVEELEKDGIGFKVTSGIVPIVPQAILYDLDYKSYKIRP DKKMGSDAYKNASFDENRQGIIGAGTGATVGKALGKGFSMKSGLGSATISLGDLKVSAIV AVNAMGDIFDDEKNKQIAGILKNNKFIPTIEVLEKISEKNSLNTTIGIVATNGKFSKTEL RKIASMTHNGYARAIRPVHTMMDGDTIFSLATNKVSADLNLVGSLGAKVMARAIANAIYF SKIENSSEFI >gi|325480382|gb|AEXN01000032.1| GENE 76 61998 - 62672 994 224 aa, chain - ## HITS:1 COG:no KEGG:Apre_0481 NR:ns ## KEGG: Apre_0481 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 223 1 223 228 330 77.0 3e-89 MEEKMKKFVPQVHSKLRKSFITVPEEIYRASGIKIYEKRIKSLLFTTDLAIIRNTNADSI MAVYPYTPQNTIAQSIISTASVPCFIGVGGGTTQGARSKYIAFDAELEGAYGVVVNSPIP NKDIKAISEFVDIPVIATVTGFKDDVVGKIEAGAEILNVSGGPQTPELVSEIRKLIGDEF PIIATGGKKPESILKTIKAGANAISYTAPSSAEVFAEMMDKYRK >gi|325480382|gb|AEXN01000032.1| GENE 77 62693 - 63685 1041 330 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848873|ref|ZP_08170383.1| ## NR: gi|325848873|ref|ZP_08170383.1| hypothetical protein HMPREF9246_1289 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1289 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 330 1 330 330 548 100.0 1e-154 MGDIFYRTYPKKFNKDRSNLGFLDIYDLDARFMIGKILGIDYIIIEDIFINFFQINKLFG QRSDFENQILKAHDLGLKVILRMDLEKISNENQLVNIINFWKEREVDGFLFDNSQNFENI FEKFDMKFIVNSKENKDEFIPSLDLSDTYKNIDFKSYILEENKKDVGFSLNKDLGFISEN ILDFKHFHTNCAKLLAIITILRKNDIFIKEGEETLFNIKGLAFSERKEIFDFYKKLIVLS YDYFDIINSGYFSLNFKDKDVLSYLFYRKDKAFIVINNLSQKNILLKLPGFLDVKKAKFV VGNISKREIFENINLRSYESFAFICPIVGI >gi|325480382|gb|AEXN01000032.1| GENE 78 63784 - 66042 2443 752 aa, chain + ## HITS:1 COG:L119891_1 KEGG:ns NR:ns ## COG: L119891_1 COG1136 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 1 288 3 290 290 224 42.0 5e-58 MLELKNISKIYKTGESEQKALDDINISFRKNEFVSILGPSGGGKTSLLNIIGGLMNYTSG DLIIDGRSTKKFKDRDWDYYRNRSVGFVFQSYNLIGHQNILKNVELALTLSGEKKNLRED LAKKALEKVGLSDHIYKKPAQLSGGQMQRVAIARALVNNPEIILADEPTGALDTETSKEI MNLLKEVAKDRLVIMVTHNPELAEKYSTRIVRLKDGKILSDTNPYEEEKTRDEFKTKKLS LSLPTALKLSFNNLLTKKARTILTAFAGSIGIIGIALILSLSNGVDDFIKESQRKTLKSY PIEIKEESLNLGENFMRDPAGDEIHNKDDKNILANNDILKRKSTLTSSISENNLSPFKSY LDKKNLSKTIGKHSTNYIYNLNLQIYGKDKDGNLINTDGSDFKDDDDNMFSSNNPSIFNI GSSEHKNFRQIISNKDGSISNIVKEEYDLIDGKWPENANELVLFTDKNNSVDRENLYELG ILPKKDYKNILNKMKDGEKIKLDHQKIKTKDLIGHEFEALIPADFYKKENNKYKNIKDDE NEKKKAIENAYKIKIVGIARAKKDSETNQTNTAPLGFTSKFTDQMIKRAGESQIVKDQEK NKDINILNNIAFKAKGQDEKRKASKSYLKNLEADQKLEAQSFLLANSDKLKENIKKSSMN PQVGQKQGQNMDIIGLFLKDPEDKVLDKLYDEKLQSNSYQNNLEDFGYVSKNAPSEIKIY VENFENRDKVKNVIDDFNKNKKKKTKSTTQIL >gi|325480382|gb|AEXN01000032.1| GENE 79 66048 - 66485 374 145 aa, chain + ## HITS:1 COG:L119891_2 KEGG:ns NR:ns ## COG: L119891_2 COG0577 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 5 145 235 374 374 86 42.0 1e-17 MTSSIRTIINAISYVLIAFVGISLIVSSIMIGIITYISVLERTKEIGILRSIGASKKDIR KVFLSETFMEGLLSGLLGVIVTILLNIPISKIIQNMTNISYIRSSLPIKAGVILVIISVL LTLLAGIIPSSIAAKKDPVEALQSE >gi|325480382|gb|AEXN01000032.1| GENE 80 66619 - 66894 219 91 aa, chain + ## HITS:1 COG:BS_yvbA KEGG:ns NR:ns ## COG: BS_yvbA COG0640 # Protein_GI_number: 16080432 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 3 90 2 89 90 80 44.0 8e-16 MFSDTFKALSDPVRIEILNLLRKKGRMNAGEIAKNFDLSRATISHHLKLLKNEDLIYETK KKNFIYYELNTSIFEEIMAWFVKFKGGENEK >gi|325480382|gb|AEXN01000032.1| GENE 81 66884 - 67525 592 213 aa, chain + ## HITS:1 COG:BS_yvaZ KEGG:ns NR:ns ## COG: BS_yvaZ COG5658 # Protein_GI_number: 16080431 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Bacillus subtilis # 9 210 2 201 207 81 28.0 1e-15 MKNKIKFKKESIISIVFSILLFALVNFLFYKKMPETIPTHWGFNNEIDDYSSKFSAFIKT PIFLIVINIFSCFMLDNDPKNINKNKLIILIGKATVPLVLLITFMISVFYGLGKEINVMV IVSLFVGFLLIIIGNYLPKTKRNYTVGIKLPWTLNSDENWRKTHRLGGYTFILGGLFFLL SPFVGNQYLILITIAVIFFIPMIYSFYLYKNGI >gi|325480382|gb|AEXN01000032.1| GENE 82 67564 - 68367 847 267 aa, chain - ## HITS:1 COG:no KEGG:Amet_2548 NR:ns ## KEGG: Amet_2548 # Name: not_defined # Def: sporulation domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 1 211 1 207 322 175 45.0 2e-42 MTNSKLIDDIILSPNNSGLRNEKITKIAIHHAAGIIKGRDLAKIFLPRQRQASSNYMIGS DGLIVLGVDEKNRAWTTSSSWCDNRAITIEVGNSTRDPSWEVSDFVLNRLIDLVTDICRR NNIYPCTYTGNKNGVLQKHEWYANTNCPGPYLGNKFSFIASEVNKRLEKDYKENLYRVRK SFNDKKSQKGAFRSIDNAKKCADRYRLRVFDEGGNEVYPRENLKSIDTLAREVIRGDWGN GNERKKRLTDAGYDYYGVQRRVNKILS >gi|325480382|gb|AEXN01000032.1| GENE 83 68364 - 68762 474 132 aa, chain - ## HITS:1 COG:lin0175 KEGG:ns NR:ns ## COG: lin0175 COG4824 # Protein_GI_number: 16799252 # Func_class: R General function prediction only # Function: Phage-related holin (Lysis protein) # Organism: Listeria innocua # 16 128 13 124 140 92 47.0 2e-19 MEKFKEVFAFIFTIMGSFLGFYFGEIDAFVYSLLCFVIADYMTGILRAGAERKLSSKIGF KGIAKKIMIFILVGIGNLCDKNLIKSEPMIKTAIIFFYIANEGLSILENSLAIGLPIPMK LKVLLEQFKEEK >gi|325480382|gb|AEXN01000032.1| GENE 84 68819 - 69304 568 161 aa, chain - ## HITS:1 COG:no KEGG:Apre_0406 NR:ns ## KEGG: Apre_0406 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 10 157 12 159 161 92 41.0 7e-18 MKDFKYENNRIKEIDKLLDEARDALGVLQRATKRVGKASDYSLTGLVGRNIVGDFLRSNK NNSINKAIDRSQDVLLSLHSNLLTFDPKLASIIDLPYKLSQFSSPRNPISDMKLRIDMRK KKLDIQKSEKKLITLIKKLSKERSKEINKIKKSIELKAFED >gi|325480382|gb|AEXN01000032.1| GENE 85 69405 - 69959 847 184 aa, chain + ## HITS:1 COG:no KEGG:Apre_0405 NR:ns ## KEGG: Apre_0405 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 173 1 173 189 86 34.0 5e-16 MALIILFNANDIEKEKLRILCEKENVKLKLIGMEAVDQKVGYLAEIEGYEKIESEGEHLD QYDFTFAFFKDFEQNDLFEFIDKMRAEGVVIEHKAGITPTNIKWTLRELLEENDQEHKTM QIVEEINGYLSKASKIKEESGEENPQIAKSVKELNHYFQTAGENFDINVAKEYRDKIKSL VESL >gi|325480382|gb|AEXN01000032.1| GENE 86 70813 - 72252 1599 479 aa, chain + ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 1 456 1 456 458 382 44.0 1e-106 MKNLWSGRFSKAMDEVTALYNESLSFDNVLYPYSILGSLAHVTMLKDCKIIDEDTYKKIK SGLIKVKKKFDKGEVELDIANEDIMMLIEKELTNEIGKAGKALHTARSRNDQNALDETLF MREACLETLTRLKNLMEVLIKKAKEEGHKIMPGFTHLQHAQPITVGYYYMAHFQRFKRDS EKFMELFKRLQENPLGACAMAGTTLPTDRFITTKLLGFDKPTENAMDTVGNRDNIMDYLY LSSLTMTHISSIAEEFVVFNSQEFSFIDIDDGYCTGSSIMPQKKNPDLAELARGKVGRNI GNLINLLTVVKGTFLTFNKDFQEDKEALFDSIKTLNMSLLIFEKMLEGSHFKEEVLKKHL EEGFIEATDIAEYLVKENIPFRSAHEIVGNLVKYCENNNKDFSQINKKDLEILEFPVKLD DLSIFKIENSIKRRNSFGATSFKEVDRQVGVGEEYIEKLENQISRLKNTIDSLYANLEK >gi|325480382|gb|AEXN01000032.1| GENE 87 72381 - 73325 837 314 aa, chain - ## HITS:1 COG:L123536 KEGG:ns NR:ns ## COG: L123536 COG1073 # Protein_GI_number: 15672103 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 8 313 16 309 311 107 25.0 2e-23 MRKKLKIIFIVISVLFISVSLFFGAFLGVETFKGLTNFTPRKATIENISKYKKEYEKFAE NKDVEEVKIKSSKFDHEIPAIFIKNKNSDKICIMVHGMGASKYSMYNQGQIFYDLGYSLL IYDQRNSGYNKAKYSTFGVLESFDTLDCLNYARENINSKAKLVLFGESLGGATSLIAASR DKTNIDYLVLDCPVSDSNEFSDKVFEKVEKEENIPGQLMKFTGNICLKLKLGFTLKDINT IKWIKNAKLDMPILIINSDSDKITPKYMGEDIYRAIDSKNKEIYTAKGYDHTKFAQENPK AYKKVLAEFFEKYK >gi|325480382|gb|AEXN01000032.1| GENE 88 73504 - 74745 1847 413 aa, chain - ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 13 413 3 400 400 395 52.0 1e-110 MINNEYEILNQAKKVVLAYSGGLDTSVMVTWLKENGAKEVICVSVDLGQVKNPDALEKKA LKSGASKFYNVNVEDEFIDDYAFKTLKAGAKYENVYLLGTAIARPLIAKVLVDVAEKEKA DLIVHGCTGKGNDQIRFELSIMTINPQINVLAPWRFWDIKGCSQEEKYAKDHGIELKVTK DEDYSMDENIWHLSHEGLDLENPENPANLEKILYWVTPAEKAVDEAEIVEIEFEKGKPIA LNGEKLKGSTLVKKLNKIGGKHGIGVDDMVESRMVGMKSRGVYENPAASILYFAHEKLES VTIHPDALQYKQKMALDYAKLVYAGKWITPLKEAMDDFIEKTQENVSGKVKVKLYKGSMQ PAGIYATNSLYLEEYATFEEDDVYKQSDATGFINLFGLSSKIYAKAIKEGENK >gi|325480382|gb|AEXN01000032.1| GENE 89 75107 - 75694 764 195 aa, chain - ## HITS:1 COG:TM1296 KEGG:ns NR:ns ## COG: TM1296 COG3341 # Protein_GI_number: 15644051 # Func_class: R General function prediction only # Function: Predicted double-stranded RNA/RNA-DNA hybrid binding protein # Organism: Thermotoga maritima # 2 190 6 195 223 121 40.0 1e-27 MKYYAVKKGRNPGIYTSWDLCLKEVKGYKGAIYKSFKKKEDALDFLEDKKIEVKADKDSV IAYIDGSYSKKDKKYGVGIVYITDEKIEEIYEDFDDEFHIHRNVAGEVKASVGAINKAIS DGKKTIYIHFDYQGIESWARGTWKRNNDLTKRYYEFFQKAKEKIDVHFIKVKAHSNDKYN DMADALAKKSLGIEA >gi|325480382|gb|AEXN01000032.1| GENE 90 75694 - 77139 1655 481 aa, chain - ## HITS:1 COG:SP1382 KEGG:ns NR:ns ## COG: SP1382 COG0366 # Protein_GI_number: 15901236 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 2 477 3 480 484 454 49.0 1e-127 MSDVMMQAFEWDTPADGGYYKFLKENAKKIKKAGIDTLWLPPMCKGGGDQDVGYGIYDLW DLGEFDQKGTVRTKYGTKKELLEAIDELHKNEIKVYADVVLNHKGNADFEEEFMARMVDQ NNREKDVSEDMKIKAWTGFDFPGRAGKYSDFIWHYYHFTGVDYDANTDTKAIFRILGDGK YWDEGVSDEKGNFDYLMNADIDHSHPEVREEIFKWVDWFMEETGVDGFRYDALKHISDEF IYDLSKHIMENKKDDFYLFGEYWQYDEGQIDGYLDDTDWKIDLFDVPLHFHMQEASKSNG NYDMRNIFNNTIVENHPLQAVIFVDNHDSQPGQSLDSWVEDWFKEIAYSLILFRKDGYPC IFAGDYYGLKGEIKKDPLKEMIDKMLDVRKKYSFGDQDEYFDNPQVVGWVRRTDNETSSL AVLISIGDMAEKQMFVGEEEAGKVYIDLSGNNKNQVTIDEDGNGIFNVGPGSVSYWAAEE N >gi|325480382|gb|AEXN01000032.1| GENE 91 77140 - 77781 915 213 aa, chain - ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 1 211 1 213 220 240 60.0 2e-63 MKINQYIDHTILKADATKDQVKKIVEEAREYYFKSVCVNSSYVSFIRNMDKDIRITSVIG FPLGAMTTKAKVFEAEDAIKNGADEIDMVINVGRLKDKDYDYVLNDIKEVKKACGDKTLK VIIETCLLDDEEKIKVCELSKEAGADFVKTSTGFSTGGARKEDVALMRKTVGEEMGVKAS GGIHTYDQAMEMIEAGASRLGCSASIAIVKGEK >gi|325480382|gb|AEXN01000032.1| GENE 92 77771 - 78871 1069 366 aa, chain - ## HITS:1 COG:alr2280_2 KEGG:ns NR:ns ## COG: alr2280_2 COG2208 # Protein_GI_number: 17229772 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Nostoc sp. PCC 7120 # 136 359 1 230 233 95 28.0 2e-19 MGKENIEKFRDDNFYVLNSMDDWVRILDKYGRIVFINEKMKRDIHLDRSLIEQNIDTEKL NEKADIFKNTTIEEERLINDKYYSIKSSPLYYQDEFVGIIEVYRDITSESKMKVDLFNAN RKMLEDIRFVRKIQTNILPKNKVYGDIKLEGRYLPSNDVSGDLFDIIKIDKDKYAFYIAD VMGHGVKSSIMTMFVKLSIAAIFERHPFYSPGQVLKKLREEFVKLDMNSSQYFTVWIGIF DCKKNTLTFSNAGHNCPPLHLINKKSYVEKLVVSGRMISNIIEQNIYQEVTINLNPKDKI LFYTDGIIESKDIGKNEYSVERLMKILKEDRSLDYILDDLEKFSWGEQDDDISLAIIDYK GEKNEN >gi|325480382|gb|AEXN01000032.1| GENE 93 79036 - 79377 513 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501162|ref|ZP_03931211.1| ribosomal protein L17 [Anaerococcus tetradius ATCC 35098] # 1 113 1 113 113 202 88 1e-50 MANKRKLGRRTDHRNALLRNQVTSLLDNGRITTTLTRAKETQKMADRMITLGKKNTLHTR RQAAQYIYKPSTVQKLFGEIAPKYEDRNGGYTRVLKLGPRKGDGSERAILELV >gi|325480382|gb|AEXN01000032.1| GENE 94 79387 - 80343 1059 318 aa, chain - ## HITS:1 COG:lin2755 KEGG:ns NR:ns ## COG: lin2755 COG0202 # Protein_GI_number: 16801816 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Listeria innocua # 1 318 1 313 314 301 52.0 8e-82 MIEKLDTKIEILDIDEETNYGKFVLYPLERGYGTTIGNSMRRMLLSSLPGSSVSKILIDG VLHEFSTIPGVVEDVPELILNIKGIDIKKHTKEDLTLFLDIEGPKIVTAKDIKTDAQIEV ANPDHYLATVNDKARLFIALDVTDGKGYRVAELNKKDTDPIGAIAIDSSFTPVKSVNFTV ENTRVGESTDYDKLILEVWTDGTITPQEALSEGASILMEDIRFFKDLPGQQFPPEVEEEE VEEIEEEDDNQVELSKTIEELDLSLRSFNCLKRAGYNTVGEIIEKSEAELKDIKNFGKKS LDEVIDKIHSLGLSLREE >gi|325480382|gb|AEXN01000032.1| GENE 95 80377 - 80970 840 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002937|ref|ZP_04049929.1| SSU ribosomal protein S4P [Anaerococcus prevotii DSM 20548] # 1 197 1 197 197 328 82 2e-88 MAVSRDPIFKRCRSLGISPAYLGYSGESKRSNSNQRRKLSEYGMQQREKQKAKFIYGVSE KQFRSYYEKASKMHGQTGENLIILCERRLDNIAFRSGLARTRREARQVVTHGHLLLNGKS VDIPSILVKEGDVIEVREKSRSSQLFKAIKETNQSFGIVSWLDSDLENLKVKVTNFPTRE DIDIPVEERMIVEFYSK >gi|325480382|gb|AEXN01000032.1| GENE 96 80983 - 81387 574 134 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485500|ref|ZP_03915816.1| ribosomal protein S11 [Anaerococcus lactolyticus ATCC 51172] # 1 134 1 132 132 225 86 1e-57 MAAKTRKSSAKRGRRRVKKNVERGQAHINSTFNNTMVTLTDAQGNALSWASAGQLGFRGS RKSTPFAAQEAALEAAKKAMDYGLKSVEVFVKGPGSGRESAIRSLQAAGLEVTMIKDVTP IPHNGCRPPKRRRV >gi|325480382|gb|AEXN01000032.1| GENE 97 81396 - 81737 493 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002935|ref|ZP_04049927.1| SSU ribosomal protein S13P [Anaerococcus prevotii DSM 20548] # 1 112 1 112 114 194 86 3e-48 MPRIAGIDLPREKRAEIGLTYIYGIGKSSAQEILEKAGINPDTKMKDLTEGELGKIREVL DDYTIEGDLRREVSMNIRNLREINCYRGLRHKKGLPVRGQNTKNNARTRKGRH >gi|325480382|gb|AEXN01000032.1| GENE 98 81749 - 81862 198 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485502|ref|ZP_03915818.1| ribosomal protein L36 [Anaerococcus lactolyticus ATCC 51172] # 1 37 1 37 37 80 100 5e-14 MKVRASVKKMCDKCKIIKRNGKVMVICENPKHKQRQG >gi|325480382|gb|AEXN01000032.1| GENE 99 81993 - 82211 252 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 101 68 3e-20 MSKKDAIEVTGVVKEALPNAIFKVELENGHEIQAHISGKLRMNYIRILPGDTVTVELSPY DLTQGRITWRKK >gi|325480382|gb|AEXN01000032.1| GENE 100 82379 - 83023 924 214 aa, chain - ## HITS:1 COG:CAC3112 KEGG:ns NR:ns ## COG: CAC3112 COG0563 # Protein_GI_number: 15896362 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Clostridium acetobutylicum # 1 213 1 213 215 211 53.0 6e-55 MNIILLGPPGAGKGTQAERLIKELDAVQISTGDIFRTNIKNNTPLGTKAKEYINKGQLVP DELTIDLVWDALDKVEDGKTILLDGFPRNITQAEALDEGMQKRDNKIDKVININVPEDVI IERISGRRVNVSTGKVYHIKFNPPKVEGIDDETGEKLIQREDDTEAAVKERLDVYNKHTS VLIDYYNKKGILVTIDGAKTPDEVFDQIKKSLGR >gi|325480382|gb|AEXN01000032.1| GENE 101 83028 - 84299 854 423 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 13 423 22 439 447 333 41 4e-90 MLDTLKRAWGEEEIRKKFYFTLVMLLIYRLGNNIPIPFIDAQKLAAAYKGMEGTLVDYLN MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTKEGEAGRKTIQKYTRYMTI FLAIFQAIAITNGLYGAALSSATPFQKLVMNVVLIGGTMLVTWMGETITEKGIGNGVSII IFMGIIANVPKTLKTWKTGLHYNTISWLSILVMAIVVIFIVVFTVRITEGERKIPVQYAK RVVGRKMYGGQSTHIPVKVNMSGVMPIIFASAVLAIPSTISLFMGRANGGLNQFFSKSTH GFIIYLVVQAALILVFAYFYNMIQFNTVEYAKQLQQNGGFVPGIRPGKPTSDYLAKVGNK ITFIGAISLALLTIVPALSSRFLGLNLSFGGSSVIIVVGVILETVKQIEAMLTMKNYKGF LNR >gi|325480382|gb|AEXN01000032.1| GENE 102 84299 - 84742 631 147 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002930|ref|ZP_04049922.1| LSU ribosomal protein L15P [Anaerococcus prevotii DSM 20548] # 1 147 1 147 159 247 82 3e-64 MKLHDLKPNQKLKTKNRKGRGPGSGNGTRAGRGQDGQNSRSGGGVRPGFEGGQMPLFRRL PKRGFKNINTKQYETINVCDLDIFEDGTEVTPELLFENKILNKNKAKAGIKILGDGEITK KLTVKAHKFTKSAEEKITAQGGKAEVI >gi|325480382|gb|AEXN01000032.1| GENE 103 84753 - 84935 232 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002929|ref|ZP_04049921.1| LSU ribosomal protein L30P [Anaerococcus prevotii DSM 20548] # 1 59 1 59 60 94 77 5e-18 MAKVEIKLKKSFIGRKDDQIATAKALGLKKIGQTVVREDNSALRGMINKIPFMLEVKELS >gi|325480382|gb|AEXN01000032.1| GENE 104 84947 - 85453 609 168 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169823869|ref|YP_001691480.1| 30S ribosomal protein S5 [Finegoldia magna ATCC 29328] # 1 165 1 165 168 239 69 1e-61 MYLLKQDVDKLNLEDRVVSINRVAKTVKGGRNMRFAALVVVGDQNGHVGVGTGKATEVPE AIRKATEDGKKHMITVPIVNTTVPHRTLANKGAGSVLLMPAKEGTGIIAGGPVRAICELA GYKDIRAKNLGSSNPKNIINACLKAFSSMKTVEEVARLRGKSIEEFDY >gi|325480382|gb|AEXN01000032.1| GENE 105 85469 - 85834 460 121 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501150|ref|ZP_03931199.1| ribosomal protein L18 [Anaerococcus tetradius ATCC 35098] # 1 121 1 121 121 181 79 2e-44 MAKKTKEQKLKTRKYRVRNKVSGTAQKPRLSVYKSNTNIYAQLIDDDAQVTLASANTLQK EVNEGLENCANIEAATKVGEMIAKVALDKGIEEVVFDRNGYLYHGKVKALAEAARENGLK F >gi|325480382|gb|AEXN01000032.1| GENE 106 85844 - 86383 736 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501149|ref|ZP_03931198.1| ribosomal protein L6 [Anaerococcus tetradius ATCC 35098] # 1 179 1 179 179 288 79 2e-76 MSRIGKKPIEIPSGVTIDVKDNLVTVKGPKGEDSQLVSKNLKLEQNDNELNVIASENPTK IENQEHGLFRSLIANMVLGVTEGYQKTLQIEGTGYRAQKQGKTLVMNLGFSHQVKMDDPE GIEVEVPNDRTIIVKGTNKQLVGQYAANIRRWRKPEPYKGKGIRYEGEHIRRKVGKTGK >gi|325480382|gb|AEXN01000032.1| GENE 107 86394 - 86789 592 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002925|ref|ZP_04049917.1| SSU ribosomal protein S8P [Anaerococcus prevotii DSM 20548] # 1 131 1 131 131 232 88 1e-59 MMTDPIADMLTRIRNGNKANHTSVSLPSSNEKRAIAQILLDEGYIKGFDVEEDNKQGILT IDLKYAEEGEKVITGLRRISKPGLRVYVKANEVPKVLDGLGIAIISTSKGLLTDKAARDL NVGGEVMCYVW >gi|325480382|gb|AEXN01000032.1| GENE 108 86808 - 86993 284 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|240145865|ref|ZP_04744466.1| small subunit ribosomal protein S14 [Roseburia intestinalis L1-82] # 1 61 1 61 61 114 83 5e-24 MARKSMIAKQKRKPKYSTRAYSRCKICGRPHSVLRKYGICRVCFRELANKGEIPGVRKAS W >gi|325480382|gb|AEXN01000032.1| GENE 109 87005 - 87547 799 180 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501146|ref|ZP_03931195.1| ribosomal protein L5 [Anaerococcus tetradius ATCC 35098] # 1 180 1 180 180 312 86 1e-83 MTSRLKEKYKSEVVKGLVDQFGYENLMQVPKLEKIVINIGLGEAKDNKNILNKAKNELAL ITGQQPIEIKAKKSVSNFKLREGQPIGTKVTLRGEKMYDFMDKLISISLPRVRDFRGINP NSFDGRGNYSLGIKEQLIFPEINYDDVDFLHGMDITFVTTAKTDEEAKAFLTLMGMPYRK >gi|325480382|gb|AEXN01000032.1| GENE 110 87565 - 87873 415 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501145|ref|ZP_03931194.1| ribosomal protein L24 [Anaerococcus tetradius ATCC 35098] # 1 102 1 102 102 164 81 3e-39 MHIKKGDKVQVISGEYKGHVGEVIKAFPKENRVIVEGANIQTKHQKARQMGEESGRFERE GKISASKVLLYSESLKKGVRTSTEIIDGKKVRVCKKTDEKFD >gi|325480382|gb|AEXN01000032.1| GENE 111 87883 - 88251 541 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501144|ref|ZP_03931193.1| ribosomal protein L14 [Anaerococcus tetradius ATCC 35098] # 1 122 1 122 122 213 87 8e-54 MIQQESRMRVADNSGARELSVIKVLGGAGRRYANIGDIVTCSVKSATPGGAVKKGEVVKA VIVRTSRGVKRSDGSYIKFDDNAAVIVKDDKSPVGTRIFGPVTRELRHEGFMRIISLAPE VL >gi|325480382|gb|AEXN01000032.1| GENE 112 88271 - 88531 331 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002920|ref|ZP_04049912.1| SSU ribosomal protein S17P [Anaerococcus prevotii DSM 20548] # 1 83 1 83 86 132 75 2e-29 MERNSRRSVQGIVVSDKMDKTITVKVETKIQHPVYKKRLNVSKKYKAHDENNEARVGDTV TIMETRPLSKTKRWRLVKINETAVRA >gi|325480382|gb|AEXN01000032.1| GENE 113 88536 - 88742 278 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501142|ref|ZP_03931191.1| ribosomal protein L29 [Anaerococcus tetradius ATCC 35098] # 1 68 1 68 68 111 82 3e-23 MKAVEIRKLSESELNKKLFDLQSELFNLRFQLATGQLENPAAIGNVKQDIARVKTIQTER KLNINKEA >gi|325480382|gb|AEXN01000032.1| GENE 114 88742 - 89173 674 143 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501141|ref|ZP_03931190.1| ribosomal protein L16 [Anaerococcus tetradius ATCC 35098] # 1 142 1 142 142 264 91 3e-69 MLMPKRVKYRRQHRGRMKGKAQKGNTLAYGEYGLQALGSTWLTANQIEAARRAMTRYIKR GGNIWIKVFPDKPVSKKPAEVRMGSGKGAPEYWVAVVKPGRILFEMSGVSEEVAREAMRL AAQKLPIKTKFVKRLEVKEVEEA >gi|325480382|gb|AEXN01000032.1| GENE 115 89203 - 89928 1017 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002917|ref|ZP_04049909.1| SSU ribosomal protein S3P [Anaerococcus prevotii DSM 20548] # 1 241 1 238 238 396 79 1e-109 MGQKVNPKGFRVGVIKEWDSKWYANKKDFSELLVEDHKIRELVKKEVYDAGISDIEIERA VNNIKVSVYTGKPGMVIGKGGAGVEELKKKVEKIAPGKRVIINVEEIKNQDVDAQLVAEN IAAQLENRITFRRAMKQAVQRTMRAGAVGIKTQVSGRLGGADMARSEGYNEGKVPLQTLR ADVDYGFAEADTQYGKIGCKVWINRGEVLPGEKAKRIPDIKQPKQNRRNKKRRPNRRNND R >gi|325480382|gb|AEXN01000032.1| GENE 116 89931 - 90278 485 115 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002916|ref|ZP_04049908.1| LSU ribosomal protein L22P [Anaerococcus prevotii DSM 20548] # 1 114 1 114 115 191 86 2e-47 MEVKATAKYVRISPLKVNYICREIRGKQVDEALTILRFTNKKGARLLSDVLKSAIANAEN NNGLSRDNLIVKKAFANDAPTMKRWRPKAKGAAYPILKRSSHIGVVLTEDEVEEA >gi|325480382|gb|AEXN01000032.1| GENE 117 90289 - 90576 471 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485521|ref|ZP_03915837.1| ribosomal protein S19 [Anaerococcus lactolyticus ATCC 51172] # 1 95 1 95 95 186 90 1e-45 MARSLKKGPFVDEHLMKKIEALNEKNDKKVVKTWSRRSTIFPEFVEHTIAVHDGRKHVPI YITEDMVGHKLGEFVPTRTFKGHAKKATELKSKLR >gi|325480382|gb|AEXN01000032.1| GENE 118 90586 - 91419 1207 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501137|ref|ZP_03931186.1| ribosomal protein L2 [Anaerococcus tetradius ATCC 35098] # 1 277 1 277 277 469 81 1e-131 MPIRKLKPTSNGHRNMSVMTYSEITKKAPEKSLTTDLKKSGGRNNTGRITVRHRGGGAKR KYRIIDFKRNKDNIPARVKAIEYDPNRSANIALLAYADGEKRYILAPRNLKVGDVVESGK EADIKPGNALELKDIPVGTQIHNIELKAGRGAILVRSAGVSAQLMAKEGRFATIKLPSGE TRLIHNDCKATIGMVGNIEHELVRVGKAGKTRYMGQRPHVRGSAMNPVDHPHGGGEGRTP VGRPAPSTPWGKPALGLKTRKKKNKSSKYIVRRRNEK >gi|325480382|gb|AEXN01000032.1| GENE 119 91431 - 91724 431 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501136|ref|ZP_03931185.1| ribosomal protein L23 [Anaerococcus tetradius ATCC 35098] # 1 97 1 97 97 170 83 5e-41 MKSPYEIVKRPIITEKSMELIEDNKYTFEVDKNANKAEIKHAIETIFEGVKVKKVRTLNF TGKKVRTRYGYGKKADWKKAYVTLTEDSEAIEYFDGM >gi|325480382|gb|AEXN01000032.1| GENE 120 91724 - 92347 863 207 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227501135|ref|ZP_03931184.1| ribosomal protein L4 [Anaerococcus tetradius ATCC 35098] # 1 207 1 207 207 337 80 4e-91 MPKVEVLNIKGENVGEIELNETLFAADIAETAVYDTVKNQLANKRQGTQSAKTRSEVRGG GRKPFRQKGTGRARQGSIRAPHYTGGGIVFAPKPRDYSYKIPRKMKRKALYSVLTSKVND NELVVLDELKLDSYKTKEANEILTNIKADKKAYVVIAENDDKVYRSFRNIEGCNVEKANL INVYDLLRHNKLVITKEAIAKLEEVFI >gi|325480382|gb|AEXN01000032.1| GENE 121 92361 - 92990 925 209 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] # 1 209 1 210 211 360 84 2e-98 MKSIFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKNV KKPIRGHFDKANASYKRYLKEVRLSEKSELNPGDTLSVDQFEEGELVDIVATSKGKGTQG AIKRWNYGRGPASHGSKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVVKVN TEDSYILVKGAVPGPKGGLVQVKQAIKSL >gi|325480382|gb|AEXN01000032.1| GENE 122 93056 - 93364 482 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002910|ref|ZP_04049902.1| SSU ribosomal protein S10P [Anaerococcus prevotii DSM 20548] # 1 102 1 102 102 190 95 6e-47 MANQKIRIRLRAYDHEIIDSSAEKIVEAVKRSGAKVSGPIPLPTEKEVITILRAVHKYKD SREQFEQRTHKRLIDIIGPNAKTLDSLKKLNLPAGVDIEIKL >gi|325480382|gb|AEXN01000032.1| GENE 123 93661 - 94308 720 215 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 3 215 9 225 229 70 28.0 2e-12 MNLRQIPIFKNLKEKDLQILKENIKIEEKIYEKGSYIFKQGDVKGDLYFLKEGSILVAKF DSNGKRSIIQAFNNKAIFGEVYAYLKEPFDFSALVEKKSKIIVIKEFRNLINETMPKSFL ISYIDLISKKCLALSQKNQITNQFTLRQKIANFLLIEEENEKVILKQTREELADFLSTTR PSLSRELSNMADEKIIKIKGREIEILNLDLLKEIL >gi|325480382|gb|AEXN01000032.1| GENE 124 94507 - 95832 1493 441 aa, chain + ## HITS:1 COG:NMB1647 KEGG:ns NR:ns ## COG: NMB1647 COG1115 # Protein_GI_number: 15677496 # Func_class: E Amino acid transport and metabolism # Function: Na+/alanine symporter # Organism: Neisseria meningitidis MC58 # 1 441 4 449 472 442 55.0 1e-124 MISNLINSLNSVIRNWLLIGSLLGVGIFYTIYTGAIQFRKFSTAFKNVFGGMFEKNHDGI SSFQALSVAIAAQVGTGNVAGTATAIVVGGPGAIFWMWFSALLGMATIFAEAYLSQKYRE SNDEGYVGGPAYYMKNGFKNKKIGMILAKTFAILIVLALGFFGNMTQSNSIATSINEAFN FIPLIVIGFIVAIVAGLVFIGGIKRIANFAQLVVPFMALIYIVFSVIILIKFRANIPSTI KTIFQAAFTTKAAAGGALGFGIKKALVMGVARGLFSNEAGMGSTPHAHATAVVEHPVEQG YTAMVGVFIDTMVVCTATALIILSTKSNEFGLDGALVTQKAFELGFGNIGKILLSISLTF FAFTTIVGWYYFGETNIKFLFGKKGLTPYRIIVLFFIIWGSTREIELVWNLSDLFNSLMV IPNVIALFYLHKDVKKMMNEY >gi|325480382|gb|AEXN01000032.1| GENE 125 95895 - 97511 2219 538 aa, chain - ## HITS:1 COG:CAC3428 KEGG:ns NR:ns ## COG: CAC3428 COG1151 # Protein_GI_number: 15896669 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Clostridium acetobutylicum # 1 536 3 564 567 668 61.0 0 MFCFQCQETAGNKGCTKVGVCGKDENTANSQDLLIYVTKGLAEVLNKLENADSKYYDLIS NNMFVTITNANFDEDHILDKVEETIKAKDELIKENNIEDLSDAGKYTTDDRDELKRKAIE VGVLNIVNEDERSLVELITYGLKGMAAYNHHANVLGYRNDQVDKFIAKTLEKTLKDDKDI NDLINLTMETGKHGLMAMETLDKANTEKFGNPEITEVDFSAGENPAILISGHDLNDMEML LEQTKGTGVDVYTHSEMLPANYYPKFKKYDHFHGNYGNSWWSQNDEFQKFNGPILMTTNC IVPLKKDNDYLDRLFTTGNAGYPGAKHINADENGHKDFSQIIEMAKSCKAPENLENTKIV GGFAHNQVEALAGDVVKEIKAGNIKKFVVMAGCDGRHKTRSYYTEFAEKLPEDYVILTAG CAKYRYNKLNLGDINGIPRVLDAGQCNDSYSLVKTALLLQDAFGLESVNDLPLEFNIAWY EQKAVIVLLALLSLGVKNIHLGPTLPAFLSETVVNFLVENFNIAPITNVEKDLEEFTA >gi|325480382|gb|AEXN01000032.1| GENE 126 97624 - 99102 1816 492 aa, chain - ## HITS:1 COG:MA2391 KEGG:ns NR:ns ## COG: MA2391 COG2326 # Protein_GI_number: 20091222 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 21 475 89 557 569 326 39.0 7e-89 MGNLISVDRKMKFQNFKRSELAERLGRLARICNDLDIPILIIVDGWESSGRGYVIKDLCR EFAAKNFDVEVFDKDESFDDLYPFIRKFWVNVPEKGKIKIFDRSFYYKIFEKKNLSDKEI QKRIDSIKSIEKALFDDQTIILKFFLNIDKKEQKKRIEKLEDSIKEDFYIDGLDVDQVKN YKDYEKHFKKTLVASDFSYSRWEIIDSNDRKAASKEVLGLALDKISQGIERVVRQREENE NEKRDYISSSNILQNIDLSKSISDDEYKEKKDKLQDEVAKLMYKFYQKGISQVLVFEGVD AAGKDGAIERLIKKVDPRLYSVHGISAPSKEELSRNYLWRFFTKLPRDGYVGIFSRSWYG RVMVERVEGFAKTNEWDRAYGEMLDMEKQIYDHGSLLLKFFVTIDKDEQLKRFKDRQREP DKQYKITDEDWRNRDKWDDYIEAMNEMLERTNASYAPWIIVEGNCKKYARIKVMEEYIKA AKNHLKKLENKK >gi|325480382|gb|AEXN01000032.1| GENE 127 99240 - 100058 1009 272 aa, chain + ## HITS:1 COG:SPy0617 KEGG:ns NR:ns ## COG: SPy0617 COG0561 # Protein_GI_number: 15674695 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Streptococcus pyogenes M1 GAS # 3 269 4 269 269 149 35.0 6e-36 MKKLIAVDIDGTLLNSKREITEKTKKALIKAQELGHIVVIASGRDPFGVYPFADILEFKK FGGLLSNFNGGRITNYKTGEVIINHTLDLNLAKEILQFSEKNLDMHYIIYSDDGVLTSSE DTYTLKEICEKAFTHYEVIDDLAYSLDFAPNKIMFSYYPDLIDDQSKILKEKFFDKTAQV KSTPRFYEIMPKGIDKGKSLKEIAGFFGMTMDDVIAFGDEENDLTMIEMAGSGVVMGNGT DFMKSKADFITKSNDEDGIAYYLEKFVFNTNN >gi|325480382|gb|AEXN01000032.1| GENE 128 100125 - 101237 1891 370 aa, chain + ## HITS:1 COG:BH2329 KEGG:ns NR:ns ## COG: BH2329 COG0686 # Protein_GI_number: 15614892 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Bacillus halodurans # 1 367 1 366 378 390 56.0 1e-108 MIIGVPKEIKDQESRVAIVPGAVSELVKAGHEVLIEKNAGIDSGIEDKDYEEVGAKIIDS AKEVWESADIIYKVKEPLKQEYKYLREGLILYTYLHLASNEELTKELVDKKVTAIAYETL RLDNKLPLLTPMSEIAGRMAVQEGARYLTKPEGGRGILLQGVPGVRPAHVVIVGAGTVGT GATKIAVGMGARVTVLDVNIESLSHLQDILPDKIETVYSNPMNIEESVRDADLVISTVLI PGRRAPQLIKEDMVKQMKEGSVIVDVAIDQGGSTDITKGHATSHSDPIFVKHGVIHYAVA NIPGAVAITSTYALSNATTRYIKTIANLGLKNACEKSPEIITAVNTYDGYVTNKGVAEDT GFEYKELNIN >gi|325480382|gb|AEXN01000032.1| GENE 129 101288 - 102226 1078 312 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1025 NR:ns ## KEGG: HMPREF9243_1025 # Name: not_defined # Def: putative 2-keto-3-deoxygluconate transporter # Organism: A.urinae # Pathway: not_defined # 1 311 1 312 315 196 36.0 1e-48 MLKLMRKIPGGMLIVPMIIAMVFTNIFPNALHIGGMTEATFTGKGSQAMIGILCFISGAN IDIKSIPKVIKKMGSLMLVRAIIGVLLNIIYVKLFGFEGILGIPALAVMSTTCISAALYL ALTLDYGSDLDVAGFSFAGLLANPGIMILLYSLGSEGELDVMTIVSSLIPLIVGLIVGNL DKEFASFIHPATGMLMPFLGFTFGAGINILDALKQSLNGVLLTLPIYFISLPAMILFERK VLKTNGVASFALAAVGAIALSLPQLLQDIDPVVAANASALTSQMAFLTIFTSILTPILLS KYCKKMGIEKTN >gi|325480382|gb|AEXN01000032.1| GENE 130 102463 - 103395 417 310 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 306 1 306 306 165 35 2e-39 MYDLVIVGAGPAGLTAAIYAKRANLNVLLLDKLSAGGQVLNTFDIENYPGFTSINGADLA IKMFEQVMHLGVEFDYKTVTDIKDLGKTKEISTLESEDKIITKSVIIASGTTPRKLGIKG EEELSGKSISWCAICDGHKYDDKDVVVIGGGNSAVDESIYMSEFVKSITVVTDFDLTSDP SSAEHLRSLGNVTVHPYKKVLEFIPNEDGLLKAVKFANKDDESLVETVEADGVFEYIGAI PQTDYAQNLGIDIQRGYVKVNEFMETGLDGVFAVGDCTIKHLRQVATAVNDGAIAGQRAF DYVKKLETEM >gi|325480382|gb|AEXN01000032.1| GENE 131 103396 - 103704 417 102 aa, chain + ## HITS:1 COG:CT539 KEGG:ns NR:ns ## COG: CT539 COG0526 # Protein_GI_number: 15605268 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Chlamydia trachomatis # 1 101 1 101 102 86 42.0 1e-17 MAKEVNGVELEEEIKEGLVLVDFFSRTCGPCKMLSFILDAVDKEIEQIKIVKVCFEENKE TVEKYGVEGYPTIILFKDGKEVERKQALQQKPVIEKMIKEYI >gi|325480382|gb|AEXN01000032.1| GENE 132 103704 - 105596 2627 630 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_1609 NR:ns ## KEGG: HMPREF9243_1609 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 630 1 629 629 751 59.0 0 MTENKHVKYVYNEHLIEIQHKNEEKMLKELREGSYTFDNPLIKYNPYIVNALSAVMLFNT EEEMAFTIVIKGKEKEGDLIHTFPKAKEHVLPIVGLYNDYENKIEIWPYQNPDKKVTHTI KVADVDTDKNIISMDTTKEYLKDQVIFSCPATSDLSIATDYRGDLRIKFDRALIWDIKQT NDGHFWMSSDRLIKMPYVLSGLYEFDLVGKIYREYRIPNGYHHDQIFMDNGDLMVLSGDF EDHTVEDRLYVIDRETGEVKKTINYKEFLEPGANKSGSWSDEDWFHNNSLWYDKYTNSIS LSGRHMNAMVNIDYDTHELNWIIGDPECWPEKYQKYFFTPKAGQEDFGWQYEQHSVFHTP NGDVGCFDNHHFGTNNPDKYLDAKDNYSRGVIYRIDTDKMEIEQTYQYGKERGAEWFSPY ICNMVYYGEDYYLMHSGGIAFDGDGNPSNSLGALIQNNDDGAKLYSSTVIMNHGKKELEL KTKSNYYRAEKISLYKEGSNNLTLGKGEIVGKNAKTVENDVKIPAEEAEGLIDPKREARI EDQFDMLTFYAKFEKGQLAALVLENDTEEHQYFISTASNNIRGAMCSGTFLTDDDRDTRT VVMKEGLKGEYKVKVIIDDKKYDTGVTIEA >gi|325480382|gb|AEXN01000032.1| GENE 133 105700 - 106347 880 215 aa, chain - ## HITS:1 COG:lin0361 KEGG:ns NR:ns ## COG: lin0361 COG0176 # Protein_GI_number: 16799438 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Listeria innocua # 1 215 1 215 218 308 73.0 4e-84 MKFFLDTANVDQIKRINDLGLCDGVTTNPSIIKKEGRDFKEVVIEIASIVDGPISAEVTS YDYDSMVKEALDIAKWADNIVVKIPMTEDGLKAINTLSKKGIKTNCTLIFSVSQGLMAAK AGATYISPFVGRIDDMGEDGGELIYNLKTVLDNYGLESEIIAASIRTNKHLEEAALAGSH IATIPGSLFEKLWTHPLTTQGIENFKKDWEAFINK >gi|325480382|gb|AEXN01000032.1| GENE 134 106470 - 106958 559 162 aa, chain + ## HITS:1 COG:lin1987 KEGG:ns NR:ns ## COG: lin1987 COG0262 # Protein_GI_number: 16801053 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Listeria innocua # 4 160 5 159 160 102 38.0 3e-22 MKIILAVDENFGIGKDNKLLFHFKKDLAHFKKTTLNNIVIMGRKTYQSMNGALPKRENLV LTRNKDLKLDDALVFNDVDKLLKYIKENKKDREVFVIGGSQIVDLLLDYCNGAIITKIYA KKDADTYLHNFDEDINFKLVEESEEIIEDNTTYKYLVYRRIK >gi|325480382|gb|AEXN01000032.1| GENE 135 106955 - 107194 275 79 aa, chain + ## HITS:1 COG:no KEGG:Apre_1627 NR:ns ## KEGG: Apre_1627 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 79 4 81 81 72 47.0 4e-12 MIEIFVSSLCPDCIDVIENYKKDPLYYGKAVLVDITESMANLKRFLYYRDKKIEFKEKIQ TNQVGIPVIISDKEEVKFI >gi|325480382|gb|AEXN01000032.1| GENE 136 107406 - 108626 1257 406 aa, chain - ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 4 403 17 416 427 140 28.0 4e-33 MNCLVGQSGGPTAVINSSLAGVIQAGIDLNYDGIFLSLNGIEGIINKNIKKVDKDLFEKN FGKDRLKKRPSSILGSCRYKLPEDLDDEVYGKIFENFKTYKIDTFVYIGGNDSMDTVMKL NAYIEKNKIDWINVVGCPKTIDNDLCEMDHSPGFGSAAKFVNSVLRQVRLDCDIYPIKSI TFVEIMGRNAGWLTATSYLSNYKRDKDVVNLLYLPEDEKSLDQIKEEIKEKLKEDNNLVV AVSEGFMDKDSLLENEKQKSFDKGFNHPIIAGIGQKISDYIHKELEIKTRCVELNIVQRT SFLISKTDSDEAFELGYLALKEGKVKTNIVPFLKREENNPYKVSYSTTNPANIANKEKKI PKEWLANRKVLEEKMIEYALPLVQGQIDQEYSDGIFDYIKLEDFAK >gi|325480382|gb|AEXN01000032.1| GENE 137 108730 - 109176 716 148 aa, chain - ## HITS:1 COG:YPO3353 KEGG:ns NR:ns ## COG: YPO3353 COG0698 # Protein_GI_number: 16123503 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Yersinia pestis # 1 148 1 147 151 135 48.0 4e-32 MREYIIGCDCAAVELKNTIKELLENEGIKVEDVGVKTVEDGTYYPNVAKTLCEKIQESDY EKRGILVCGTGIGMAISANKCKGIRAAVCHDQYSGERAVLSNNANVFCFGQRVIGPELAK KIVKEIISLEFKDGSSTPKVEAINALEK >gi|325480382|gb|AEXN01000032.1| GENE 138 109190 - 111181 2471 663 aa, chain - ## HITS:1 COG:lin1343 KEGG:ns NR:ns ## COG: lin1343 COG0021 # Protein_GI_number: 16800411 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Listeria innocua # 1 653 1 657 664 745 55.0 0 MFNNEDQKAVDALRVLSISQIEKANSGHPGLPMGAAPMAYVLWNKVLNTNPKNSKWINRD RFVLSAGHGSALLYSLLHLSGFNLSLDDLKEFRQVGSKTPGHPERMHTDGVEVTTGPLGQ GVANAVGLAMAEKHLSKLYNKDDYKVMDHYTYALCGDGDLMEGVAHEAISLAGHLKLSKL ILLYDSNDICLDGDLSTSFTENVEETFKACNWSYIKVEDGNNLEEILNAIEQAKSDNDKP TLIEVKTTIGYGSENEGTNKVHGSPIGADDFKKAKERYNWVDDDFVISDEIYKTFEQIQK RGKEENQKWDQMYDSYKKNYPDLAQELEDGFNRKLPENWLDKVKKYSPEDKAIATRASSH EILQDIAREIPTLWGGSADLFSSNKTDIKDTVAFRDESPEGRNVWYGVREFAMATIANGI LAHGGSFHHVSTFLVFSDYLKSAVRVSALSKLPTTYVFTHDSIAVGEDGPTHQPIEQLAM LRSIPDTIVLRPADANEVRLSWKIALESKEKPVVIALTRQNVSNLEQTTKLDNIDKGAYI ISDSDKKPEGILIATGSEVELALETKEILKKQGKDIRVISMPSMELFRDSGEDYIEELLP MDCKNIVSIEMGTSFGWGEFTGRNGLNISIDRFGISGEGSQVQKELGFTAEKIAEAYNKK FDK >gi|325480382|gb|AEXN01000032.1| GENE 139 111204 - 112193 1450 329 aa, chain - ## HITS:1 COG:lin0366 KEGG:ns NR:ns ## COG: lin0366 COG2376 # Protein_GI_number: 16799443 # Func_class: G Carbohydrate transport and metabolism # Function: Dihydroxyacetone kinase # Organism: Listeria innocua # 1 328 1 330 331 305 52.0 6e-83 MKRLVNNPEDIVEELIEGYTKAFDDVKVSELSGRVVARKNIDKDKVGIIIGGGSGHEPLF LGYVGEGFADACVIGHINTSPDPYAVYNAIKEVGSNKGVLLMYGNYTGDVLNFDMAQDMA IAEGYKVKSIQVTDDVVSAEDKDGRRGIAGDIFVMKIAASAADLGYEFDEVYELAQKAND LTASMGVALGAADDPRTGHEMFNLEQGQMEIGMGIHGEPGVRRGKIETLNEVVDEITDPL IKELDLKENDEVGVLINGLGATPYMDLFVMNKKLSEILEEKKIKVNRTFIGTCASTMNMP GQSITLIKLDEELKKLLNQPCDAPYFKIK >gi|325480382|gb|AEXN01000032.1| GENE 140 112204 - 113082 1003 292 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_2211 NR:ns ## KEGG: TepRe1_2211 # Name: not_defined # Def: hypothetical protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 1 290 1 290 292 225 46.0 2e-57 MTILNLCLAFAGGIFASLIGGTNSFIFTGFTALAGIAISLVTGNDDFLNTVAFGPFFSPA IAFFGSVASTAFAARWSKREKGDEKSMKPLGPAGIEGQNLLMPLYKTKDPLVILVGGAFG SLGYSINYLYSQILHLNLDTVALTVFTGGVICRLLFGKKGLFGQYPSDFKRYSDMTPKYI LFTVIWGFFIGLLSGYVAIKFNIASIGFAISAMSLIFLHIGHEFTSTHHVTQVAAYAGLG FANPWMAAIFGVIAALFGEYWGRTTNTFVDTHLDREGSTIALFSFIIFALTA >gi|325480382|gb|AEXN01000032.1| GENE 141 113092 - 113877 1042 261 aa, chain - ## HITS:1 COG:PM1640_1 KEGG:ns NR:ns ## COG: PM1640_1 COG0149 # Protein_GI_number: 15603505 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Pasteurella multocida # 2 249 3 254 270 243 50.0 2e-64 MKKVYLGTNTKMYKTIKEHVEFVKDLEEGTKDISRDDLELFVIPSYTSVGPCNEAIDESL VKIGAQNMNWADEGAYTGEISPLMLEEVGAKLIELGHSERRHVFGEDDITVNKKVLASLK HDFTALLCIGETEGQKNEGYTDKIMNIQINVGFEGVEDKDIDKLWVAYEPVWAIGENGTP PTKEYVEKTHKKIREILVKRFGEKGKEIPILYGGSVNNENFEELIRIDEVDGLFIGRSAW VSENFLKIIKRVMEIKKENKK >gi|325480382|gb|AEXN01000032.1| GENE 142 113886 - 116129 2463 747 aa, chain - ## HITS:1 COG:TM1430 KEGG:ns NR:ns ## COG: TM1430 COG0554 # Protein_GI_number: 15644181 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Thermotoga maritima # 254 731 2 480 482 544 53.0 1e-154 MNEIIKKDNIKFTDLKLDWKKALYLSAKPLLDDGSIKEGFIENIIENIEKNGPYINLGKG IAIAHTKDSSFVNEDSLSLLRLSCPVIVSNDEKNPIYNLFTLATTGSDKHLNYLSSLTKN LSDESILKEFEDATSRSHIHKLLNNLDDEKIKFATVCAEGIVSSFMIKENISNILSYWGV RDKVEIFIYNIDNYETAKNKAIDEWFVSKDAEDKVDLGDDYTVLDSVIDRVELEKKLKTV AEKYDLLNGKKKPKYVLVIDEGTTSSRAAVFDKSANRMAFKGSDFKQYFPKSGWHEQDPE EILDVTVEAMKEAIKNADINASNIASVGITNQRETTIMWNKKTGKPYYNAIVWACRRGAD YCQSLIDQGLNDFINERTGLIIDATYSASKIRWIIDNVEGVKEDIEKDEVLFGTIDTWLL WNLTGGKVHATDSTNASRTMLYNIYDLKWDDEILEKLDIPKSILPEVKDTIDDYGFVDEK ILGTKLPIHSLVGDQQSSLFGQACFIEGDCKNTYGTSNVPLVYIGEKTIKSDKGLLTLAW SFDNKPYYAVGASILTTGEVMKWLKEKIKLYDDNDKMTEEVKSLEDSNGVFFVPAFQGLG APHWDMYARGMIIGLSSGVERKHIIKAGLDSIAYQTEDLLDQIEKETGIKVSNMKVDGGA SNNDYLMQFQSNLLDMPIKRPLDTETTSLGVAYLAGLGAGVWENKEVIKDLWKSAKEFTP DRNKEKVKESYEDWKRAVEYSKGWMKK >gi|325480382|gb|AEXN01000032.1| GENE 143 116131 - 117672 2007 513 aa, chain - ## HITS:1 COG:mlr7268 KEGG:ns NR:ns ## COG: mlr7268 COG1070 # Protein_GI_number: 13476054 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Mesorhizobium loti # 4 447 5 461 517 211 32.0 3e-54 MKYVIGIDAGTTNVKSVLFDLEGNELYTESVPNLPYYLPNNEIEQDMNVVWQNVLNSLIL LMRRNKINKDDVIGMGVTGQGEGIWLIDEYGKPIQNAYLWNDGRAYKEVENLLKDENENL YKDIVKTTGLTAFPGNQLILLMWMNKNQPEVLEKADKMFFCKDWIRFNLTGEVFTDTTDA GTAHLDLSTNQPAKSIYKKLGLEKYLRLIPEVKKPHDIGGYLTQKVADNVGLNAGIPVVM GGIDLVNSMVGMGAVENNDIGIILGTTCGVQVVLEKDKAEFGDSRYENHAIENLTISMNP TMNGMPNIDWSVGEIAVNKDYKIIDEVIREVKPGCGGLIYHPYIGAAGERAPFTNVNAKA SFFGINQDTDRASLVKAVYEGMIFAVKDCLLKASDDGEIFISGGGAKSTILPQLIADATG LVVNKSKGYELGAKGAAIMVLIALGYYKDYPEAKAKCCEALDKIYPNKDKKYIYDRYFTL YKKLRLAYNDLWNERREILDDVNKYMTEKGIDK >gi|325480382|gb|AEXN01000032.1| GENE 144 117737 - 118102 442 121 aa, chain - ## HITS:1 COG:CAC1324 KEGG:ns NR:ns ## COG: CAC1324 COG3862 # Protein_GI_number: 15894604 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 5 119 4 114 117 94 46.0 3e-20 MKNKELVCIKCPRGCKLFIGNIEHPDQLIVEGNQCPRGEQYAVDEIVDPKRTITATIKLI SETERRLPIRTDGEIPKKLYKEIVDEINKMKVTAPIKRGQVLVENIKDTGIDLISTKAVR K >gi|325480382|gb|AEXN01000032.1| GENE 145 118092 - 119369 1695 425 aa, chain - ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 1 418 1 414 417 395 53.0 1e-109 MVYDLIIIGGGPAGLTAAKEAYEEGVRNMLIIERDKELGGILNQCIHNGFGILKFNEELT GPEYAGRYIDFVEDKNIDYLLHSIVLDLREIENGNKIVECASMDDGYLELEAKTVILAMG ARERTRMMIETPGFRPAGVFNAGLAQKYLNIDGYKVGKKVVILGSGDIGLIMARRLTLTG AKVERVVEIEPYTNGLQRNVAQCLDDFGIPLQLSHTIAEIKGKDRVESVVIAEVDKNYNI IEGTEEEVECDTVLFSVGLIPENELSRNLGVDIDKATKGPIVNNSLETNIPGVFACGNVL HIHDVVDLVSDEAEEAAKNVVSYLNAESKEKKSHILVKHDKNIGYVVPQVIEDKNKHVEL KFRVRKPSGGVSFVVEDKDGNEIIRKKRWATQPSEMEKLIIPKTKLEKIEDTINIRVEGE DIYEE >gi|325480382|gb|AEXN01000032.1| GENE 146 119372 - 120811 2006 479 aa, chain - ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 4 478 24 496 498 363 43.0 1e-100 MKNYDVIVIGGGATGANILRELSKYELDLLLLEANTDVGAGVTKGNGGVVHSGYDATAGS LKAKLNVRGTEIFEQYAKDLGIPYESKPSMTLAFNESEKETLDKLYENGKQNKVPGLRII ETDEILELEPHANPEVKYALLAPSAGITDPYTIAEACCENAVINGAEVKTSNTVCDIKKD GDFYTVKTKEGNEYKTKYIVNAAGVYGDVIANLVNPGSHEITERHGSLMIIDGNIGFELQ TTLFPVPGAHTKGMAAIPACGGNIILGSTAEIQKDKENTSFTKDQADLLFNSASRLIPEL EKKYIIRVFSGLRPVEVNSNNDFVIEEDEKNKGFYNAIGIQSPGIASSFAIAEYMVDLMK KDIDLKEKSNYDKKRKAIVDFSKLSTEERKKLVDKDPKYANVICRCEVVPEAEILDAIRR PCGATTVDGVKRRTRSGMGRCQGGFCESRIVEILSRELGKKPEEILKENKGSEILIGEE >gi|325480382|gb|AEXN01000032.1| GENE 147 120821 - 121069 388 82 aa, chain - ## HITS:1 COG:PAB1580 KEGG:ns NR:ns ## COG: PAB1580 COG1850 # Protein_GI_number: 14521416 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose 1,5-bisphosphate carboxylase, large subunit # Organism: Pyrococcus abyssi # 2 77 344 419 424 84 47.0 6e-17 MPCCGGGVNPGIVPTYINQLGKDIMLAAGGAVQGHPDGAESGVKAMIQSIESACQGIDLN EARKNHKELDKALEIWGIDDRL >gi|325480382|gb|AEXN01000032.1| GENE 148 121045 - 122100 1301 351 aa, chain - ## HITS:1 COG:AF1587 KEGG:ns NR:ns ## COG: AF1587 COG1850 # Protein_GI_number: 11499182 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose 1,5-bisphosphate carboxylase, large subunit # Organism: Archaeoglobus fulgidus # 8 333 22 348 437 290 43.0 2e-78 MSNIIYELFENINNSDYIVASYYLRLEKNVDPYEKAKSFAIGQSLGTWVKVPGITDEMRK KYMGKIVNIVEVPASDLVDDSILEYRDYIFSIAYPFDNFGPKFPMIMTTLLGNDASTSTQ AKLIDIYMPKKFTDMFNGPNFGIEGLREVSGVKDRPILLNMIKPCLGFKAEAGAEIFYQT ALGGVDLIKDDELLANPSYCTLEDRLDKYIEASNRAYEETGKKTLYVPNITDHVDKILDN AKMAVDKGAKLVMLNFASVGIDVLQYLTKNIDVPVIAHYASAGPYYESAFSGIASNLFLG KFARMAGADVVMINTPYGGYPLKKSRYLRTAHELMLDHPSYKKQCHVVVGE >gi|325480382|gb|AEXN01000032.1| GENE 149 122347 - 123108 851 253 aa, chain + ## HITS:1 COG:lin0370 KEGG:ns NR:ns ## COG: lin0370 COG1349 # Protein_GI_number: 16799447 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Listeria innocua # 1 245 1 243 254 135 36.0 6e-32 MIKEKRLELIKKIVNDKKNVSVKYLSDSLGHAESTIRSDLNDLNRAGDIKRIHGGAAKID DVADSKFVFFENRLSEEINEKKLIASKAIKYIEDDQSIALDGSTTCYELAKLIAKTKLRL TVITNGLMVAEAINNNPLITTILIGGMLSNETFTTEGSFNNELLNEVNISTFFFSSRGID TKTLTDFNIYEVRLKNQILNKSRKNIALIDSSKFGSTSTSTICQTNDVDIIISDDKLDEK VREKFISKNIEIL >gi|325480382|gb|AEXN01000032.1| GENE 150 123318 - 124367 1385 349 aa, chain + ## HITS:1 COG:AF0871 KEGG:ns NR:ns ## COG: AF0871 COG0240 # Protein_GI_number: 11498477 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Archaeoglobus fulgidus # 3 315 2 309 335 166 34.0 8e-41 MSVITVIGSGQMGSSLSIPLLDNGHEVRLVGSPLDGEIIDGLRENNHHKTLMRDLPKTDK LKFYKIEELDKALPGTDLVVCGVSSFGVDWFGKEILPKIPKDIEILSVTKGMINEDDGNL TVYPDYWKREYDNDRDIYAIGGPCTARGLTDKEETFVAFCGVDVEKLKWIKSIFETPYYI INLTTDVVGLEAAVALKNGYALATAIGMGMAEKRDDGIKFINGISTLFQQSTKEMFELLE FMNCDLKNIMYAVGDLYVTVQAGRSRTVGLLLGKGLSIEEVKKELKGQTLEAIVIATRTA DAVRKLSKKNILDEKDFPLLMHVDELLNKDAKLNVPWKDFEIIDDYKNK >gi|325480382|gb|AEXN01000032.1| GENE 151 124388 - 125893 2095 501 aa, chain + ## HITS:1 COG:CAC2612 KEGG:ns NR:ns ## COG: CAC2612 COG1070 # Protein_GI_number: 15895870 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 1 493 1 499 500 384 40.0 1e-106 MNYYFGLDLGTGSLKTVLFDANGKEIAVAEQEYPHYQPHNGWSEQEPEDWFKAVKRNISY IMNRVDIDKNDVKAIGLSGQMMGLILLDKNGDPLRRAILWNDGRTSKACEHVREIVSDEL FEKYSLTPARPGLTAAKIQWVKDNEPEIFEKAEMLLLPKDYVRYRLTGNYATEVSDASAT QLLDVVNRKWADEILDLMEIDKSRLPKVYESHEITGYVEKNLADELGLSHETIVVGGASD NAAAAIGVGVVKPGRTLTTIGTSGTVFSFSEKPILDKNRSVYCFCMTMPNTWHYMGSVNS AGGSLKWWRNTYYPDDKDYLEINKDLESTKPGSENLIFLPYLNGEQSPHFNLECRGSFVG LSTLNTKKDMTRAVFEGISYALNDIKNGIKKTGTPIDIIHMCGGGSKSEFWRQLLADVYD LPVALPDMNSENSAALGAAMLGMVGYGQYKDLVEASDHILKMKDHVYTPNKENVEIYKKY YEEFRKLYPALKESYASILHL >gi|325480382|gb|AEXN01000032.1| GENE 152 125958 - 126764 904 268 aa, chain + ## HITS:1 COG:CAP0070 KEGG:ns NR:ns ## COG: CAP0070 COG0561 # Protein_GI_number: 15004774 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 3 266 5 278 283 144 32.0 3e-34 MKKIIALDVDGTLVNSNHVITEKTKNTLLKCQKEGHILVIASGRDVEGVKDLAEDLQFDT YNGLLSKYNGCRVTNFATGQVLFNHTFKIDQSNEIISFVKNLDVEIFTFKDGKVYSDDKN NKSLIDTTKRLKIGYIIDKNMRNGINFLANNMIIGASKDKIDQVYPIVQKEFENKYTVVR TTENYVEFMPKGFSKGSSLLEIAKYYNIDKENIIAFGDEENDYSMFDIGAFSVAMRNASE KIKEKADFVTKSNDEDGIAYYLENYLLK >gi|325480382|gb|AEXN01000032.1| GENE 153 126971 - 128305 1673 444 aa, chain - ## HITS:1 COG:FN1944 KEGG:ns NR:ns ## COG: FN1944 COG0733 # Protein_GI_number: 19705249 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 5 444 19 459 459 548 66.0 1e-156 MDNQISNRDGFQSKWGFILACIGSAVGMGNIWRFPILVSQYGGMTFLIPYFIFVVLIAKT GVIAEMALGRSTESGTVRAFGKCTELKYGKKSIGESLGIIPVGGSLALAIGYTCVMAWIF KYTFMAFTGSLTAMEQDMDIIGKTFSETAVGAHFWIVVAIVVSFTIMILGVSNGIEKSNK IMMPALFILFIGLAIYIYTIPGSAKGYEYIFTIDKELIKNPKVWIYAFGQAFFSLSVAGS GTVIYGSYLSKKENLIASAKNVAVFDTIAALMAAFVIIPAMATSNAALDTGGPGLMFIHL VHVMNGMPGGRLVSIIFYVCVLFAGISSIINLYESSVAYLQEKFNFSRKKSTLIIHVFGC VVAMLIQPIVSEWMDVISIYICPLGAALAAIMFIWVAGKEFALKAVNEGSDKPVGNWFYP LTKYVYVGAAVLALIAGAILGGIG >gi|325480382|gb|AEXN01000032.1| GENE 154 128371 - 130014 2259 547 aa, chain - ## HITS:1 COG:FN1943 KEGG:ns NR:ns ## COG: FN1943 COG3033 # Protein_GI_number: 19705248 # Func_class: E Amino acid transport and metabolism # Function: Tryptophanase # Organism: Fusobacterium nucleatum # 1 546 1 545 545 946 81.0 0 MKKYQLDVPTPHSYTYVTKNVPNVTVEQRERALKATHYNEFAFPAGMLTIDMLSDSGTTA MTDVQWSAMFLGDESYGRNKGYYVLLDTFRDVFERGNDQKRIIDLVRTDCEDVEKMMDEV YLCEYEGGLFNGGSAQMERPNTFIIQQGRAAESVLFELVRNILNEREPGKTYTIPSNGHF DTTEGNIKQMGSIPRNLYNKELLWEVPEGGKYEKNPFKGNMDTEKLEELITKLGAENVPL IYTTITNNTVCGQPVSMANMRECSRIAHKYDIPYMFDAARWAENAYFIKVNEEGYEDKSI NEIAKEMFSYCDGFTASLKKDGHANMGGVLAFRDKGLFWKKFSDFNEDGSLKTDVGILLK VKQISCYGNDSYGGMSGRDIMALAAGLYEASKFEYLDARTKQCEYLAQGFYKAGVKGVVL PAGGHGVYINMDEFFDNKRAPETFAGQGFSVELIRRYGIRTAELGNYSMEYDLKTPEQQK EVANVVRFAVNRSQLSKEHMDYVIAAVKALYEDRASIPNIKIVKGHNLPMRHFHAFLEPY EPSEDEK >gi|325480382|gb|AEXN01000032.1| GENE 155 130373 - 130999 720 208 aa, chain - ## HITS:1 COG:no KEGG:Apre_0269 NR:ns ## KEGG: Apre_0269 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 16 205 1 180 204 100 38.0 6e-20 MKMEKFIVLEKLGEEMYKDKFGNIPNKDKINYYLIESNQNLGPWVTRLKLIGKSAKMIGK ELKLDPDIAYACGSLFEIGKKENKKDLAQVMTGFNILRNESYFFPARIAITSKFIIKDIK TFDENFNIEKKDQKKLENLLKSYQYNDYDKLIQLLDKSILENYVGIENYYKDKKEDKEKE IKILNDYQKYFEEKLKNSIKYYVDKNAR >gi|325480382|gb|AEXN01000032.1| GENE 156 130941 - 131645 751 234 aa, chain - ## HITS:1 COG:CAC3591 KEGG:ns NR:ns ## COG: CAC3591 COG3884 # Protein_GI_number: 15896825 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Clostridium acetobutylicum # 51 192 57 204 248 70 30.0 2e-12 MRKTKEFEIGRFITNSEGYLKNKYLLSLMFEVSFDQAEEVEDEKIMKDKRWIVYSWDIKI EKPIKAKDKIKITTFAIDMNKFYAYRNFFIEKDGEIIAKAYCVFLLFDIKKMRPVKIPKE IASAYQKEDPIYEEKSHKYDKNFGSLEKIQIRRTDLDSNYHVNNASYMDLLGEISEVKDQ DVEFINIVYKNEIRDKKYVFGQKCEKNNEISYELVDENGKIYSFGKIRRRNVQG >gi|325480382|gb|AEXN01000032.1| GENE 157 131647 - 133281 1814 544 aa, chain - ## HITS:1 COG:BH2708 KEGG:ns NR:ns ## COG: BH2708 COG0661 # Protein_GI_number: 15615271 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Bacillus halodurans # 45 501 24 480 526 228 31.0 3e-59 MGYRKRKLEIIREFLSLDLILDIRKLLKNKNKNSNQIREVESRFGKKLRTLFEDLGPVFV KFGQLLSTRRDIFSENIISELEKLQDDVKEEDFENIRQVFYEEFSKDIYDVFDEFEHKPL ASGSIAQTHLASIKVGSLERKVVVKIQRKDLDQRVKEDLKIMKDLYKKLESKLDGIESFN FGEIIEEFSLSLNKEIDFEVEKNNIKKYRKLNVKENDLLSPDVYDSYSSKKVLTLEYIDG KSIRSVFEKKSNKRKDMAQKIIEAYVNQMFTYGYFHADPHPGNIFVDKNLNIYLLDFGIV GNLSENYRYQIMKVFLGASFGEVKLITDAIIGMGLLEFDSKKIGDFEKRIQKLLDKYMVM SLNQMKLADLIRDFYTLLVDYSIKIPSELTNFAKTVLILEGLIEKLVYKESFLELALPIA KSMVFKIFSPDIVVNRLRPKFYDTYSLIKEFPQTTLNILRQLARGDFRIIDQKSEEERKS YEKIENQKSQAIIFLGLSIIIGFSLLSLSNINIDQNILKAFLILCISLGLFMGFIIIKNL YRKE >gi|325480382|gb|AEXN01000032.1| GENE 158 133284 - 133724 610 146 aa, chain - ## HITS:1 COG:SPy1823 KEGG:ns NR:ns ## COG: SPy1823 COG2131 # Protein_GI_number: 15675651 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Streptococcus pyogenes M1 GAS # 4 139 3 137 153 170 56.0 7e-43 MAKDRLTWNQYFIKLAHMVALRGTCDRAYVGCVLVNNENRIISTGYNGSIKGNPHCDEVG HTMRDGHCIATIHAEMNALLYCAKEGISVKNSICYVTHFPCLNCTKSLIQAGVKEIYYTN DYRIDPYAIELLEKNKIKFEKIENRD >gi|325480382|gb|AEXN01000032.1| GENE 159 133839 - 135092 1052 417 aa, chain - ## HITS:1 COG:no KEGG:Apre_0432 NR:ns ## KEGG: Apre_0432 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 416 1 412 413 102 26.0 3e-20 MKDFKKEISILSRRNGFWIILLVAVSLLFSGLFQTKSLDETHRSLIQTTNRLNTMAKTGK KYGKDVKIDKKFFQDNDILSEKMEKKYKYDEYINFDYEKASQKEIDKYEEFQLKNGEYIQ TLDQYEFLSKDAKGKSSGFFLNSISALGVVLAIVLGVLFSSMEHATSYYEFTRIYPWTKK KDFLMKICFGLILVGGFVLVSSFLNYMIIKTSSFEILKTGSRQVPETIKSFGILSAIYLA ILSIGFMSGNILGHGGLAIMTFGFLDILDGIIGNISQIILGYSDYNRSFAYLINEKIVDN GNPINTILRVILRPLSNFNTSKYGVLGLIIFSLIVFIISYSLIEKTKTENSGMMVLLKPI ANLGKILIILLFASAGTMIFQSSIFEGFSIMNFVVFAILIYIFTKIFNILFKLRLKV >gi|325480382|gb|AEXN01000032.1| GENE 160 135092 - 135955 1058 287 aa, chain - ## HITS:1 COG:lin2912 KEGG:ns NR:ns ## COG: lin2912 COG1131 # Protein_GI_number: 16801971 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 3 279 1 281 295 132 33.0 6e-31 MIVEVMSLYKSFGKNKVLEDVNFSLDEGKIYALVGRNGSGKTTLLKIMADIYQKDLGKIN IYGKSFKEDKHIIENIAYLPDRFDYFDYSSVEKMLGYYQDIYPKFDKRFVIKELEKNNID IKKNLRSFSKGYKNLIGLLAVIGTNAKLVLLDEILDGMDVLNKELILSYILDMKDFGRTV LASSHELEELAKIADETLYISKNGKLTNLYQNKEKFVKLQVVVKDKLDPKILERAVLRFN LGRVYTILIENKENLLGNIKKNETVVQLDILDPKIEDYFYWEKGRSK >gi|325480382|gb|AEXN01000032.1| GENE 161 135927 - 136319 430 130 aa, chain - ## HITS:1 COG:BS_ytrA KEGG:ns NR:ns ## COG: BS_ytrA COG1725 # Protein_GI_number: 16080098 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 1 128 1 130 130 73 30.0 1e-13 MFDLNNSSQIPLNEQIVEQTKLMIAQGILLDGDPMPSVRDLSKSLLINQSTVQKAYNKLK EDGILLTKKGLGTFVSLDDKKIDLKKARLEKNLYDIFLKCRFYGIDFEKIKEIYEKSKED FYDSGSNEPL >gi|325480382|gb|AEXN01000032.1| GENE 162 136770 - 137006 256 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848989|ref|ZP_08170499.1| ## NR: gi|325848989|ref|ZP_08170499.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 78 1 78 78 81 100.0 2e-14 MIEQEDGTFKYGLSEKEDKNQSESSSQNKTGKLVQKANNSTQKPKSAVNVKTGVAGVGAV VGVLLLAIIGYFVTKKKK >gi|325480382|gb|AEXN01000032.1| GENE 163 137312 - 138202 1068 296 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848857|ref|ZP_08170367.1| ## NR: gi|325848857|ref|ZP_08170367.1| hypothetical protein HMPREF9246_1376 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1376 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 296 1 296 296 452 100.0 1e-125 MKLKNKALLTSALILALAFSGVNSVKASDDISSDSSLESTEKDSKNQDNAEALKEDIKEK DPVYCWINLYVKNRRVKDWLKDGSYYRIEGGNTNQLDSYGYDYEKIEIRDNLIPGKKQKI EILDGKEGNVYAEGEVNLIADAKYGHKMDLEITPKIPIKTRKMTLNFKDKALKEDRYLTY NMSDKYYIFVDGKFVGEYNKDKMRNNSFKDFEYETGKKFKIEFRRSNKSDSELLASIEDE MPKDGVMVDSKSMNVYLKLPTDSKEDKKDSEKGSETTASSGEKKVKKLVKLLMVQK >gi|325480382|gb|AEXN01000032.1| GENE 164 138597 - 140177 1726 526 aa, chain - ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 73 526 68 525 525 408 45.0 1e-113 MKKYNEKIKKILNENRFVEKTRSSLLKVVFGRAGLYILFIILQILAIIGILKYISIDKSL IFGSSALIGGISLLFILSMDVNPYEKLSWFFVIAVFPTFGIMFFILSRIDIGKKLEESTI MDSEEETNYLHTIDNKLVEELKNEDKEFYNLVKYLNDYGSYPVSKNNDAKYYRVGDDTVN DLIDAIRSAKDFIFVEFFIINQGYFWGTILEELAKKASEGVEVRLMYDGTNAILNLPKNF PEEMENLGIKCKVFSPIIPIISTYHNNRDHRKILVVDGKVSFTGGVNLADEYINVEERFG HWKDTFIRLEGPVVQSFTIMFLQLWDSEEKEDLERYLKTYPKKSEGYMIGVGDNPIRKER FFKNIYMHMLDTAKDYVYIMTPYLIIDNEMIKSLTFAAKRGVDVRIVLPKIPDKKFPYML AKSHYKKLIQAGVKIYEYIPGFVHAKTWISDGKKAVVGSVNLDYRALYLNFECGVYIHKA PVIKEILEDFQITFDISKEISMEDVKAYPLYKKLAAAIIKPLAPLM >gi|325480382|gb|AEXN01000032.1| GENE 165 140354 - 141160 556 268 aa, chain + ## HITS:1 COG:BB0768 KEGG:ns NR:ns ## COG: BB0768 COG2240 # Protein_GI_number: 15595113 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Borrelia burgdorferi # 8 245 2 245 264 90 29.0 4e-18 MKKSKNTERILLIGDFLSSGYMGGSLCRDVLNFYSYDVDFLPSALISNQFSQSPIEIFDS SEYLKNTLEVYKKQNRKYKAVLVGFVLNLKQAKIICDFVKENDFFMVLDPIMGDSGKIYN SLDKGIVEIYKYMADFAKIIIPNLTEANLLTDNKFTSPHPIVDFFEKKDKNLVITSVEDK NRHFILSKDKEYIEEEYIYLNKSFGGSGDLFDSIFLAYFLENKDLKQSIKKTRDMISRVL NYQIKLDYQASDINIFEIFKNLESKVVV >gi|325480382|gb|AEXN01000032.1| GENE 166 141157 - 142497 1629 446 aa, chain + ## HITS:1 COG:PH1807 KEGG:ns NR:ns ## COG: PH1807 COG0534 # Protein_GI_number: 14591560 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Pyrococcus horikoshii # 8 446 6 463 463 154 28.0 4e-37 MIKNKYWKRALQIAWPSVLESFFIALAGLIDTFMVSSIGSNAVAAIGLTTQPKFIALSFF IAISVSVSALVARRRGEEDKKMANQTMVTAMIVALLLCILISSIFVIFTPQILKLSGSSP DTHDLGVSYFRIIMGGLIFNVISMTINAGQRGSGNTQIAFTTNLVSSLVNIFFNYLLING NLGFPKLGVAGAGLATVLGTIVAAIMSISSLFRKSSYMSYKLIKKYALGFSNFIFKEILA LGSNIFVENIAARIGFLVTAITAAKLGTDQFAAHNVGMNLLSLSFSFGDGMQVAAVALTG KALGARKKDEAIKYGKTCQEIGLSISIIISIILVLFRKNIFRMFFDDENIIAMGSIITFY LTFIVIFQISQIIFGGALRAAGDVKYTLAVSLISITFIRSAATLFFVHVLNLGIQGIWMG IMADQISRFVGLWTRFRKGDWVNLEI >gi|325480382|gb|AEXN01000032.1| GENE 167 142626 - 142853 348 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848954|ref|ZP_08170464.1| ## NR: gi|325848954|ref|ZP_08170464.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 75 1 75 75 67 100.0 3e-10 MKIKKVLPVLALSLALVGCGNKAETKSNSNSASTPASTTTTEKADSNASTTDSNAASTPS SNDASTPASDAGSNK >gi|325480382|gb|AEXN01000032.1| GENE 168 142960 - 143133 298 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848752|ref|ZP_08170262.1| ## NR: gi|325848752|ref|ZP_08170262.1| hypothetical protein HMPREF9246_1381 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1381 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 57 1 57 57 93 100.0 6e-18 MAEFEKGDKVMLTEDLNWSISKGEVGIVIDWDFFDFTKVKFDNGEEVLVDNRKLMKV >gi|325480382|gb|AEXN01000032.1| GENE 169 143407 - 145521 1456 704 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696329|ref|ZP_03304457.1| ## NR: gi|212696329|ref|ZP_03304457.1| hypothetical protein ANHYDRO_00866 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00866 [Anaerococcus hydrogenalis DSM 7454] # 1 703 1 703 705 1023 90.0 0 MKYDLLKKEFTYCGSFMIWDNSIQKNGLPKKLDNKEFRDERLNSDFIYLAMNIRLDKKNF KDIDKDFLTNDEIFTSDMPAFCGFHSLDDGKYNNTPYTRLNKLYSNTVLEGAYITDFFKV APNSKIPNGYATKTSDEVFLYLDSLSKEDRDNFLRYQLLTLERELELLEIENPKFIVIEL IYDLVKYSFDKFVNKKDFLNLYKAKIVDKPSSFGTVLNKYQRDIIHIFLKNLDYNSYPEF LIAYLEKYSQDIKDLKSIKNKADLMAIFYICLEDYDDFPNDIKSYLDKIKISYKDLIENI KKTFSKAFIYELIKNFPFIYADKDVWNEYIEKFYKDLAEDGMLVNISQNLSYIINLFKVK DIENSSFLTKDFDTYIFLFLFKKALNLQGNIYYKEDVKDLKFPSFFSKINEINYKAVEKM LDDNDLSYTNLLLSYEDFNSLYFKNLKEKLFNKDLYRLINFNNDNILISIGKKSDQIEYE YYDDKCKLFLKEIIEKKNLKDNPLTLSLNENAKIKKSLKLADFLLSIKRGYPTVELSNDW VNNSNSKKGVKYLSNSNVNKGFIDHRNCLVYELIDEDKEKFYNYAEKDDIIITKNSPYSA SIVENDEKYLVNDNCFILTVDKNKIDPYYILAFLSSKKLIRSINTNVLSIKKIKSLPINL HSSSDIEDISAKMKKIIIDLEVLYENFLKLDHNRKNVFNSEKKT >gi|325480382|gb|AEXN01000032.1| GENE 170 145582 - 145836 337 84 aa, chain - ## HITS:1 COG:BS_veg KEGG:ns NR:ns ## COG: BS_veg COG4466 # Protein_GI_number: 16077112 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 9 84 3 78 86 63 38.0 9e-11 MEGGYMEYKSVNEIRTEVEKNVGKEVTLKADKGRKRIVTKSGVILDAFPSVFTIKVNNAF DTERTVSYSYSDVLTSTVKLQIKN >gi|325480382|gb|AEXN01000032.1| GENE 171 145914 - 147299 1864 461 aa, chain - ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 1 460 6 465 465 473 50.0 1e-133 MTEYKRKNVWENLSSDQEKELESLSKDYMDFLDKAKTERLAAKEIVKYAKEAGYVDLDEK IKSGKINPGDKIYAINKNKAVAMFHIGEEDLEKGLAIVGGHIDSPRLDLKPVPLMEENGI SYLKTHYYGGVKKYNWTNMPLALHGVVFTKNGDKVEISLGDKEDEPVFYISELLIHLSKK LMTKPAEEVVTGEQLSIIVGNRPLLDEKENPVKKNILKILNEKYGIEEEDFITAELEVVP AGKAREVGFDRSMIASHGHDDRVCSYAALRALLDIDKTKKTLVGLFVDKEEIGSVGATGM TSQFFENTLLEIMNLKEEFNLIKFKRALRNSKVLSADVTLAEDPNFKDATESQNSAQISH GVALTKYTGSGGKGGSNDADAEYLSEVRLAFNKDGVIFQTGELGKVDQGGGGTIAYILAE YGMDVVDCGTPVISMHAPIELISKADFYSTFTAYRAFYKNI >gi|325480382|gb|AEXN01000032.1| GENE 172 147308 - 149152 2046 614 aa, chain - ## HITS:1 COG:BS_htpG KEGG:ns NR:ns ## COG: BS_htpG COG0326 # Protein_GI_number: 16081033 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Bacillus subtilis # 2 614 3 625 626 501 47.0 1e-141 MKKEFKAEAKKVMDLMINSIYTNKDIFLRELISNGSDAIDKLYYKDLKSDKNVDKKDYYI EIIPNKEKRSLTIRDTGIGMDEKDLEENLGTIAKSGTEIFKKDIQGEDLNNLIGQFGVGF YSAFMVSDKIVVNSKKDDQAYMWISENAQGYEIEKSDKKSQGTDITLFLKENSDDKNYDI YLDQYKIKELIRKYSNYIRYPIKMEVTKSRKTEDSTDEDPKYEDYSEVEVLNSEIPIWKK SKKDLTDDDYINFYKDQGYGFDDPLSWLHLNIEGTVEFRAIIYIPRKAPFDFYSKDYQKG LELYSSGVKIKDRHEDLLDDEFAFAKGVVESDDISLNISRETLQETRELRFIAKQINNKI KSHLLDMMKNDREKYQIFFKEFGNNIKGAIYESYGAKKDRLEDLLLFNSYREDKLISLKE YKDKMKSTDENILYTVGENLEKIKNSPALKSVDEDEDVLLLDQKLDEFLIKMLNSYKDIS FKSINEVDENEEVNEENKDLIEKIKEILPEEVVDVKISQNLSDDVISMIKQKGDVSIEME KTLKDQVNAPHLKAQKVLEINKNSKAYELLEKDLKENSDEFKMVVNILFDQAKLIEGLDI ENPLEYAKNIWKLI >gi|325480382|gb|AEXN01000032.1| GENE 173 149214 - 149546 253 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848890|ref|ZP_08170400.1| ## NR: gi|325848890|ref|ZP_08170400.1| hypothetical protein HMPREF9246_1385 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1385 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 110 1 110 110 142 100.0 6e-33 MSEKNLEKIMSLRKKLEELDQDLIKIKSKNSFLKFFLKSLVLALIFLFIGRYTNLKNESK IMVFVGVFVLSNILQTIFTSKKQKEEIEKINKEQIKIQAEIFSLVKDSNN >gi|325480382|gb|AEXN01000032.1| GENE 174 149644 - 149859 358 71 aa, chain + ## HITS:1 COG:no KEGG:Apre_0399 NR:ns ## KEGG: Apre_0399 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 71 1 75 75 92 66.0 7e-18 MALEDRKKEKVEITHDMLIGDIIQAKPESINTFLSIGMGCIACPSSLYETLDEACMVHGI DPDFLLEQLNK >gi|325480382|gb|AEXN01000032.1| GENE 175 149897 - 151303 867 468 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145634045|ref|ZP_01789756.1| 50S ribosomal protein L21 [Haemophilus influenzae PittAA] # 4 449 3 447 456 338 40 1e-91 MDKIIKINSELSDFLWGYPMIVALLFGGLVLVFRSNFWVFKNFSYIFKNTFGRLVKDSKS DENSISPFEAVSTALAGTIGAGNIVGVATAIGFGGPGAIFWMWIASFVCMTTKMVEVTMA VATRVSDDDGKYIGGPMYYIEKGAGSKFLAKIFSFFAFIAIIGTGALVQSNSISESLNAM TGLNLHIGGILIVIFMLLVVVGGIKRIGAFASKIVPIMSIFYIIGCILILILQFENLLPA FKEIIVCAFSGKSVAGGATGSAILLSIRWGLARGIFSNEAGLGTAPMAHATSHTDHPIRQ GMWGAIEVFVSSMIICTMTALVIITSGLYETKGLEGAALTAASFSKTLPLGKYIVSLALI LFAFTTAVSWCYYGQRCVKYLTGSTKIAEIFKYAYIGFCYVGSIGGLKFAWSVADTANAL MVIPNIIALIIMSGTFRKILKDFDKYKISEKRGNYAWTYDNKWEKYFE >gi|325480382|gb|AEXN01000032.1| GENE 176 151615 - 152721 1740 368 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 2 367 4 372 374 327 46.0 2e-89 MTVRAPYKYDIVGSFLRPERLKKAREDFSKGLIKEIDLKKIEDEEIEKLIEKEKKAGLKF ITDGEFRRSWWHYDFFWGLNGIEKYTLEEDKRIKFHGEVLRPDSVKIVGKISGTNHPFLE HFKYVQKFEEDDIKAKQTIPAPAQLLRTVYNQIGEGGVYENEDDFIKDVAKAYGEFFKEL HDLGCETVQIDDCTWGALVDDDAIKEYEKDGKNVEELKKTYLTINNEAIDKAPEGLNVLT HICRGNYKSAFHFKGGYDKIADYLLKDEHVNGFFLEYDDKRSGSFEALKKVPKGKKVVLG LVTSKKADLEKKEDLIARINEAKKYLDKDQIAISPQCGFSSTEEGNKITEEDQWKKIALI KEVAEEVL >gi|325480382|gb|AEXN01000032.1| GENE 177 153097 - 154272 1503 391 aa, chain - ## HITS:1 COG:CAC3298 KEGG:ns NR:ns ## COG: CAC3298 COG1979 # Protein_GI_number: 15896542 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 363 1 363 390 423 53.0 1e-118 MLDFTYSIPTKIHFGKDALDFVGEEVKKYSSKVLLTYGGGSIKKNGVYDKVVKELKESGV EIFELSGIEPNPRIDSVRKGVKIIKENNIGAILAVGGGSTIDASKFMAAGALADFDPWEF ISKGKPMSPAIPLLSVLTMAATGSEMDNGGVITNPETKEKLSSGHPDTKPKVSFLNPEIT YTVSKYQTACGSSDILSHIFENYFNQYGSMYMLDRMMESLMKTVIKYGPIAMKDPNNYEA RANLMWASSWAINGFISSSSKSQWTVHPIEHELSAFYDITHGLGLAILTPRWMEYVLNET TAHKFYDLGVNVFDIDKDLDQIEVAKKTIEKVKEFFFDTLGLDSNLKEIGIDDKYFDQMS KKACGKKEKIDGFIELSPADVRKIYEMCLED >gi|325480382|gb|AEXN01000032.1| GENE 178 154383 - 156203 2717 606 aa, chain - ## HITS:1 COG:BH3854 KEGG:ns NR:ns ## COG: BH3854 COG2213 # Protein_GI_number: 15616416 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannitol-specific IIBC component # Organism: Bacillus halodurans # 5 457 2 466 468 454 50.0 1e-127 MARENNINNTRDKFQKFGSFLSGMVIPNIGAFIAFGLITAIFIDSGWAPNKKIAELISPL LNYLLPILIGYSGGGLVHGKRGAVAGAIGTFGIVVGADIPMFLGAMLIGPFSGLVIKKFD DLVKDKVPNGFEMIVDNFSLGILGGIICVLSFLFIEPVVVSVTNAMAGGIEFLMNKGFLP LVSLLIEPGRVLFLNNAIDHGIMAPLGLTQVAKVGYSPLFMIIGNPGIGLGILLAYWKFG KGNMKEAAPGAMIIQFLGGIHEIYFPYVLSNPLTLIACIAGQATNIIVMQLLHYGTVYTP SPASIFSVIAMTPKGKYLSMLIVVLSATVVTFLVASIFVKRYYRNYTGDEEEVSENLNEN VGKEISSKEIEKIVVACDAGMGSSAMTASSLKKRLKNEGFDLDVIHTSIQSIPDDADLIV VHKELAEAAKKKAPTKTRIIISSYINPKEFDDVVKLLNEKRSDLKTSLEVLPNDNIIIDD SITTKEDALIKINQKFVAGGYTTEKYLDGMKEKESEFHTNMGNGLAIPHGSYDYKSEILN TGLVVIVNKNGITWNDEKVYLVIGIAGKGDEHLEILSKIATEFDTEEKVKEIVELGDKNK IKKALE >gi|325480382|gb|AEXN01000032.1| GENE 179 156222 - 156971 833 249 aa, chain - ## HITS:1 COG:HI1009 KEGG:ns NR:ns ## COG: HI1009 COG1349 # Protein_GI_number: 16272944 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Haemophilus influenzae # 1 244 5 248 256 142 35.0 5e-34 MFTEQRRIEILTYLREKNEVSVADLAGKFNVSLPTIRSDLTFLEENNKLTRTHGGAILNK KIGEYQTISEKKIINTDKKTIIAKKAIDLVEENDTIALDSGTTSFELCKKLTSFDKLTLI INDFAIANFLSENSTFKLIFVGGLIGRDINSTNGPKALSFLDNINCDKAFISCESFDLKK GFSTFDENQAAFKKRLMETSKTKIMLLDSSKFDKVSSFTFSKIEDYDYLISDKVSENYRK KIVKTTKII >gi|325480382|gb|AEXN01000032.1| GENE 180 156971 - 158107 1472 378 aa, chain - ## HITS:1 COG:AF0871 KEGG:ns NR:ns ## COG: AF0871 COG0240 # Protein_GI_number: 11498477 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Archaeoglobus fulgidus # 32 365 1 324 335 150 33.0 3e-36 MKTFDKAIKADIIKLTKEKEKIKRKRRKKENMKLVFIGAGMMASSMSMPANENGHEIRLV GSPLDDDIIKEGKETAYHNTLKRQLNKNTKFYYLSELDEALEGADAVICGVSSFGVDWML DEIYPKIDRKLPIISVTKGMVNDEEGNLLTYPEYWEMKLKEKGIDRKICAVGGPCTSYEL ADHDDSLVCYCGEDIDTVNFFKEIFETDYYHISTSTDVRAVELSVALKNAYALAVTLAVG LAEKREGIGAVHYNSQAALFTQATKEMTGLLEYVNGNDNQIELGVGDLYVTVFGGRTRKI GTLLGRGLSFDEAMEELKGVTLESVVISKRMGEAITVLDKNGKIDKEEYPLLMHIYDIIE NGAEVNIPWKKFNTEDIK >gi|325480382|gb|AEXN01000032.1| GENE 181 158226 - 158600 207 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848861|ref|ZP_08170371.1| ## NR: gi|325848861|ref|ZP_08170371.1| hypothetical protein HMPREF9246_1394 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1394 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 25 124 1 100 100 152 99.0 6e-36 MSTKNYHAQLWGWFTIFKKICLSLVILFLFSSCKEKSNHHYPLEIGESIQTKEKNQKKEF QIDGYYLVKRDCFMYEKINPLKKWDKIKKKSSVKILSIENENFVKVDYFGNQAFMKKEDL DIDS >gi|325480382|gb|AEXN01000032.1| GENE 182 158548 - 159048 643 166 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848940|ref|ZP_08170450.1| ## NR: gi|325848940|ref|ZP_08170450.1| hypothetical protein HMPREF9246_1395 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1395 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 166 1 166 166 261 100.0 1e-68 MKNNKLVYEKIAVKICNKDKNTLGLINLGTKNQNQGLEIARSCARIKNTLYIDFTNLDNY NFDKNIEKIIVRDGDLSILNISIEDDMAKIVNSLEFREIMENIKNSYDLILINEENYESL SFIMTKFEDGKIAFVKENKSKKEKFENSLDEYKKLSCPIVGVVYNI >gi|325480382|gb|AEXN01000032.1| GENE 183 159038 - 159688 773 216 aa, chain - ## HITS:1 COG:no KEGG:Apre_0165 NR:ns ## KEGG: Apre_0165 # Name: not_defined # Def: lipopolysaccharide biosynthesis protein # Organism: A.prevotii # Pathway: not_defined # 1 211 1 212 386 103 35.0 6e-21 MEKIKSSEIGKIIKDNIKYVIISAIIFFLIGYFYTSSKTKDTYEAKAAILIAENRGEDLT YNSLMLNEKLANIYGEVLNSEDLYLNVAKKMNDEKKSEKLKENLETEINASAGIITFEYK GKGEKQTALALNLIIKEFRKDIKNFLGKDNIEVLQNVSVKDVSSKKPILIGIFLGLMALI LSLLFIVTKEFLSGKIRSYHYFDEVEVDLLGVIDEK >gi|325480382|gb|AEXN01000032.1| GENE 184 159698 - 160816 918 372 aa, chain - ## HITS:1 COG:no KEGG:Apre_0164 NR:ns ## KEGG: Apre_0164 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 371 1 373 373 324 54.0 5e-87 MGFLMFTSIELSLYAINSMIDFDKKKQMKYAAGLMFLVFFIFAGLRGSGDADYYNYLYFA KDIGTDLSKVFSAYPVEIGFRISSYLINVLGISRQAIIILMNFLSIAPTAYICLKESENS FLSAIIFLPIFIQFDMQTSRTASAIGLGFLSIYLFSKNKKIKSLLALLLALSFHKSAVIL LPFFVLMKIDLSKTFQIIAMGLSFLLSVFSKQVLMVVGQILSAIGMGTMSLKITNYTFQG TFAKEMSFIDPRILYALFLFLTSLIYFNKKEIKKMSIEDISIKAIWFCAIVLLVFRSSTA IAFRFSNFFGIFQMLYLPILLKKLRKEDEYVHFLVYLSIFVYIVPYAIFLMVNAPTYGFF FTNEQAILSLKN >gi|325480382|gb|AEXN01000032.1| GENE 185 160918 - 161439 716 173 aa, chain - ## HITS:1 COG:L67226 KEGG:ns NR:ns ## COG: L67226 COG1335 # Protein_GI_number: 15672251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 4 168 6 169 171 126 38.0 2e-29 MDVLLVIDLQNDFIDGALGNDGNEKIVKPIEKLVENFDGEVIFTRDSHDENYLQSLEGSH LPVSHCIKNSHGWQIRIDTKNNKVIDKPSFGSYELVDYLKKLNENDKIKNIYMTGICTDI CVLSNAILIKNALLDTEVTVYENLCKGTSEKNHQTALDAMRNCQVIVSKYLEK >gi|325480382|gb|AEXN01000032.1| GENE 186 161528 - 162583 984 351 aa, chain - ## HITS:1 COG:RSp0647 KEGG:ns NR:ns ## COG: RSp0647 COG1024 # Protein_GI_number: 17548868 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Ralstonia solanacearum # 6 342 22 369 390 138 29.0 2e-32 MIKEKIIENLGIIYLDRPKVLNALNLEMIESIEKILKKWEDDDQIRAVLFDSLSPKGFCA GGDLKSIYNDYLLNDECENKDEFYQQEFILDKYVKNYKKPIISHYFGIVMGGGIGLTINS DFIICDESVNWAMPETRLGFVPDVGVCKHLSKLPQALGQYLGLCGESLESSDLIKYKLAD LYINSKNYEKVLDILIDLTKNYQGQNLIEELKRKTEEFKAEKISSSLDENMGKIEKYFSF SSLDEILQSLEENKDDDFAQKTLDNLIQKYIFMLQVQFEKYFLCKDLSQDEVFDLDLKIL KYSRKTGAMKEGIRSLIIDKESANWKEKSLDQVSSKKVKDLLGIEKFYSER >gi|325480382|gb|AEXN01000032.1| GENE 187 162672 - 163322 905 216 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848799|ref|ZP_08170309.1| ## NR: gi|325848799|ref|ZP_08170309.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 216 1 216 216 379 100.0 1e-103 MKNKFLKAGLLALIIGFFTPFYVKADQDNSVYEKDVIETIEKVENSKNKNIKAYNQALIR LARKISPEDQIVLDESQSLIKEADEILEKLGALKESEEKTEDPSDLVENSNSNDISDSED QTSTEDSSNLDNLSQGYKLKNEQYMNLEKGTYCLGPVCPEGWPKIKGNMNSYNKKKHEFI YHTPGQRDFDKISDENIIWFKSEEYAKKANFRPALR >gi|325480382|gb|AEXN01000032.1| GENE 188 163332 - 164009 535 225 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848886|ref|ZP_08170396.1| ## NR: gi|325848886|ref|ZP_08170396.1| hypothetical protein HMPREF9246_1401 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1401 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 225 1 225 225 328 100.0 2e-88 MKNLKKKLVFVAVLSLSFCVSKVSTYASSTDEIINSANSIVEKLDKNTNDLNNLKGEKEL KEILEARDKFNGLLDKLPKEDFKDFHMGDEVNNLDLIKNKTRLLEVLEGYFKLDEGMKKN LLDPYNKIKDGLKDENLSSDDVDKLIKDYNEKYKKLLKEESSSNKSTSKVAKLVKLDDKD KSNLSKTPINNGRKASNVKTGVKSLSAVGIFLFGSLIILRKIRNI >gi|325480382|gb|AEXN01000032.1| GENE 189 164381 - 164923 493 180 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848806|ref|ZP_08170316.1| ## NR: gi|325848806|ref|ZP_08170316.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 180 77 256 256 259 100.0 6e-68 MTDEQIYYEKLMPLFIYWNMANGIYSVMVNNNYLMPALIAIMGYSLVLITMVRIIDQYKD FSKKYKYLVTLPTGIHTGFLIFFVFTNILMYLGQNKKDPNSLFTIIFALILLILLSATIL FVYKENKNPGLIIGYLWAMLGIISRQRPNKIIYIGSIILFALSIIISIYIKNFKEKNSSK >gi|325480382|gb|AEXN01000032.1| GENE 190 164944 - 166245 1982 433 aa, chain - ## HITS:1 COG:SA1938 KEGG:ns NR:ns ## COG: SA1938 COG0213 # Protein_GI_number: 15927710 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine phosphorylase # Organism: Staphylococcus aureus N315 # 1 427 14 440 446 422 53.0 1e-118 MRFVDIIEKKKNKKELTDDEIQFWIDGVVDGSIPDYQTSALLMAIVLNSMTDHETAKLAD AMKNSGHVMDLSDIEGIKADKHSTGGVGDKTSLALGPIISACGLKLAKMSGRGLGHTGGT LDKLESIEGFNVFLKEEDFKKQVREIGFAIMGQTGELVPADKKLYALRDVTATVDSIPLI ASSIMSKKLASGSDTILLDVKYGEGAFMHTIDDAKKLARAMINIGKKLGKDTRAMITDMN QPLGNTIGNALEVREAIETVRGEGPKDFTELVLTAGEIMLMQGKIAKDKNEARKMLNDAI NSGKAFDQLKKMVAYQGGNVDQIENPTLLPKAKFITEMKSKNEGYIENIHSMNLGILSMK LGGGRERKEDDINYAVGLEMKVKKGDKVKKGDPLCLVYHDKKLDNEWIESFYHTFTYSKE KTKPIAIVEEILQ >gi|325480382|gb|AEXN01000032.1| GENE 191 166299 - 166520 350 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848921|ref|ZP_08170431.1| ## NR: gi|325848921|ref|ZP_08170431.1| hypothetical protein HMPREF9246_1404 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1404 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 73 1 73 73 117 100.0 4e-25 MAIFDRKNEKAFEKLVEYYGLEDIKKEDLELISENSSIFASGGINGLFAQNWLMIKQLDR LNKNIEKLLEKNS >gi|325480382|gb|AEXN01000032.1| GENE 192 166611 - 167015 402 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325848845|ref|ZP_08170355.1| ## NR: gi|325848845|ref|ZP_08170355.1| hypothetical protein HMPREF9246_1405 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1405 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 134 1 134 134 171 100.0 1e-41 MIKKLIKIFRPNIFRVFILLILFLTMGAYFFKTNMSGGLLLVGDLIFIFVTLLFSDHFDL YKSNKYKNQFLLAVFFTIIIIMVLSMVLVYLNMDVNDFKGFKSISFNLYMLTGAYILSLF YKEIRYFLDKKAKK >gi|325480382|gb|AEXN01000032.1| GENE 193 167029 - 167478 558 149 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_0200 NR:ns ## KEGG: HMPREF9243_0200 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 140 1 146 146 64 30.0 1e-09 MLKDKKYYNLVKKQLDKDKILEKFEKNNGKITSVMEIDVVKVPENVNIDQKEDHDEGIYA FGVSFSNINQNAGVLLDIKEFKPLSPFWIFNQEKSQKDISQNDLKFFMETLVENIEDGNT NFPIFVFYNSKNKLSISPQAIDPLDILKK >gi|325480382|gb|AEXN01000032.1| GENE 194 167543 - 168946 397 467 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 21 466 15 443 447 157 27 4e-37 MEKNKSLNGLFSFDGDATLRESLPLAFQHVIAMIAGCITPTLIFAGAAGLNPSDTIIMIQ ISLIGSALTSLLMIYPIKKIGSKLPMIFGVSFSYLPTMIALSSQFGARGPKEVVAIVLGA QVVGGICAILFGLGLKYIMPLFPPLVSGTVVLVIGLSLYPIAITNIGGAGSVDVAGWGAW QNWLVGGITLILSLGFTHFGKGMIKLANVLFAIIIGYIISLFFNMVDFSSVSQAGWISVV EPFHFGISFEPSAIFSITIIFIVTAIEGIGDMTSTTVGGMNRIPSKRELSGGTIGFGVAN IFLAALGCLPTATFSQNAGIISINKVINKKVFTLASLIILVSGLVPKLSSILTTIPYPVL GGATLSIFAAITMNGIRMITSQPLSARNTSIVGVSVAIGIGFTSVVSSAQIAGVSFMPEG LSIAIGSSPVVLSTISAILMNLLIPEKEEDKAKEDSIESLELKEIEN >gi|325480382|gb|AEXN01000032.1| GENE 195 169107 - 170426 942 439 aa, chain - ## HITS:1 COG:CAC3451 KEGG:ns NR:ns ## COG: CAC3451 COG2211 # Protein_GI_number: 15896692 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 6 436 6 438 458 144 29.0 3e-34 MEREKRLKKIQKIGYGLGDIGSNFSWTFISSFIMLYCTNIIKIDPAIIGSLFMVSKIFDG ISDIIMGRIIDKTNSKMGKAKIWYLISIFPTVIFTYLLFNVRDDFSQNGKYAYVFLIYSL LGTVFYTMNNISYSAMTALCTKNKEDRVEMGSFRYFFAMIAIVFINSYSLNLIAYFGKGQ KAWSKLALIYSIIALIFLLIPVFSVKELKDKEIKSDFKVFQSLKILLKNKYFILIFFLHI FTYLSIALSSTMMAYFAKYSLKNTDRLITINIFTYLPIICALPFIPKITKRLSMRDAGIL GHSIGLIGGFILIISLVRKSFILFLLGIFLKSLGTAPQTGVLNAIIAEIDDSSFKKNGKK LTGTIYSLTTFSIKLGSGLGVFISGIFLKIGQFDGQILDQGQKALNFINYSYILSHALLP LISLFIFYFLDLEKFNEKY >gi|325480382|gb|AEXN01000032.1| GENE 196 170478 - 171515 1219 345 aa, chain - ## HITS:1 COG:lin0800 KEGG:ns NR:ns ## COG: lin0800 COG0687 # Protein_GI_number: 16799874 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Listeria innocua # 11 340 25 354 357 342 51.0 6e-94 MSSFIFGTKKLNEKEKDQDSKNIYFYNWGDYIDPQIIKDFEKETGYHVIYETFDSNEAMM AKVEQGKTSYDLAFPSEYTVEMMKDKKLLKKLDHKKIKGLDNIDSRFLNLSYDPNNQYSI PYFWGSFGIIYNNKKYKKEDFSSWKNLWDPKFEGEILSFDGARETLGIGLLANGRSLNET DEKVLRQTKDELVGFMKNVKAILADEIRMYMAQGEADVGITFSGEASMAESINKNLSYTI PKEGSNIWFDTMVIPKTSKNTKGAYALINYLLKPEVAAKNADYVWYPTPNKKAMKYIDKE ARDDKTLYPDDEDIEKLEVFKNLGKERTILYNDLFLDLKISPHAD >gi|325480382|gb|AEXN01000032.1| GENE 197 171553 - 172350 773 265 aa, chain - ## HITS:1 COG:lin0799 KEGG:ns NR:ns ## COG: lin0799 COG1177 # Protein_GI_number: 16799873 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Listeria innocua # 4 265 2 262 268 270 60.0 2e-72 MENKKNRLGNLYLIFLFIVMYLPLGFLIFYSFNSGGNMNVFESFTLKYYKKVFEDERLIN IVINTLIIGLLSSLIATIIGTLGAISIYYMRDKNLKKKVLSLNSVLMVLPDVMMGASFLI LFSFLIKIPMGFYSVLLSHIAFSIPIVVLMVLPRLYALNPDMMKAAEDLGANDITILNKI ILPNIASGIFAGFFMALTYSLDDFAVTFFVTGSGFSTLSVEIYSRVRTGISLEINALSTM IFILSLILAIGYYVIQSREEKRRAR >gi|325480382|gb|AEXN01000032.1| GENE 198 172340 - 173137 779 265 aa, chain - ## HITS:1 COG:L176724 KEGG:ns NR:ns ## COG: L176724 COG1176 # Protein_GI_number: 15673146 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Lactococcus lactis # 9 241 7 242 262 255 59.0 7e-68 MAKKYQKLSAIYYIWILIFIIAPILLLIYQSFFDIYGNFTFNNYISYFSNKNYMIMTFNS IFTAFLITAFTLLWAYPFSYFLSKAKHKDFILLLVILPTWINLVLKAYAFIGLFNKNGSI MGFLGLASKGVLFTNPAFILVASYVELPFMIIPIFRAIDSIPNEYIIASEDLGASKFQTF RKIILPLSMDGVMAASQAVFIPSLSLFLITRIIGGNKIITLGAAVEEHYLVTQNWGMGST IGLVLIFMMFGVISILNKKAVKNGK >gi|325480382|gb|AEXN01000032.1| GENE 199 173130 - 174236 1076 368 aa, chain - ## HITS:1 COG:lin0797 KEGG:ns NR:ns ## COG: lin0797 COG3842 # Protein_GI_number: 16799871 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Listeria innocua # 8 361 6 360 364 436 61.0 1e-122 MCDNKYSVVLKKVSKFFDDEEILKSVDLELEKGKFYTLLGPSGCGKTTILNLIAGFLEAN SGEIYINGENVLNVPANKRTVNTVFQNYSLFPHMNVFDNVAFGLEIKKTDKKIIEKEVKK ALDMVNLSGFEKREISQMSGGQRQRVAIARAIVNKPDVLLLDEPLSALDMKLRKSMQVLL RDLQWELGITFVFVTHDQEEALAMSDWIFVMDKGEIVQQGSPKDIYDEPINRYVAQFIGE SNILKARMVDDYKVEFSNKTFACSDAGINKNERVEVVIRPEDINILPIDEADIVVNIDNI LYRGVFNELICFDSSDFRWKIHTTRNFEEGDDIGISFDAENIHVMRYNESEDDFDKRMEK YAIGEDDG >gi|325480382|gb|AEXN01000032.1| GENE 200 174340 - 174435 124 31 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLEQIRQDSKEIKNKNKGLEVSFIFNYMY >gi|325480382|gb|AEXN01000032.1| GENE 201 174500 - 175063 495 187 aa, chain - ## HITS:1 COG:MPN507 KEGG:ns NR:ns ## COG: MPN507 COG0732 # Protein_GI_number: 13508246 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Mycoplasma pneumoniae # 15 104 7 97 363 77 46.0 2e-14 MFSSMAKLHIYIYIRVRDLFDIQRGKSIYTKTYCKNNKGEYPVYSADNNNPLGFRNEYDY DGKYLSSSINGIAGVLTILEGKFSTNADRVVFIPKVENINLAYVKNILEPILRNKNKGRK GLKGKNEFTKLTPSMIEDEMIPIPYDMYGEVFSEKQRIIASKYITIDMIKKEIENRLSEL INIDLFF >gi|325480382|gb|AEXN01000032.1| GENE 202 175014 - 176144 1117 376 aa, chain - ## HITS:1 COG:MYPU_4340 KEGG:ns NR:ns ## COG: MYPU_4340 COG0732 # Protein_GI_number: 15828905 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Mycoplasma pulmonis # 10 268 5 272 336 100 33.0 6e-21 MAEVRYKEVKLNKLFKNKRGNSNYTKKYCNANKGEYEVYTGTTIGSFGFINTYDYDEPLL TYTTDGENAATIKILSGKYNVGGHRAILFPKDENIVIDYFKWTLQKLFFDNVKKGDVPSI TWSRIKDIEVKVPIDKNGIYDIEKQKEIVKKYEIVGKKKKELKEKLEYFKDVQVDFSNEI AVETKEVPFEELFDIERGKVISRKYINDNTGDYPVYSTQIDSSFGYIDSYMYDGEYLIWN TDGLGGYIRKVDGKFSITNIVGIMKLKEIYKESVNLEYIRRILEPIFRENVKGREGVGGK NEYTKINSTMIKNLDIKINFPINKDGIFDLEKQREIVSKYKAIEEMKKSILEKGLPFTLS NVQFDGETPYIYIYKG >gi|325480382|gb|AEXN01000032.1| GENE 203 176132 - 178243 2108 703 aa, chain - ## HITS:1 COG:SP0886 KEGG:ns NR:ns ## COG: SP0886 COG0286 # Protein_GI_number: 15900769 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pneumoniae TIGR4 # 319 627 157 436 497 85 27.0 3e-16 MGKSEQMIQNEIYSNNTTILDKYECLSLGATTINNLMKSSIIKEYSVNKKIGSKKPDVLI IDSEKNVIIYVEQKRPSKLKSEKDIKEAINQELYVAKAINAKIYVVSDGSSYIWINPKTG NPIIDENNNLINLEIKPKENGKEVAKLINDILISINDESDQILKKEFLDPTDLAVKINRK LVNLTFASAKMSLYTFVELFLFKYLSDIGVLSGDSSFFYIANMYKEEYKKIDPSINDAKV LGKYLDGPRETMKTLFPEGEDGTSIINGQVFHVKKDEYNQYISLDNTDKIFKEVVLEFEN YEKENGKFIHISTDFKSKLFETFMKHSDEKSNMGQFFTPLKIVNEMIEMVDIYEGMSICD PACGVGKFILEAIEDKISEYFTYKKKKLEKRIEIIGYDKMMSERDDLTIILAKANMLIYF SELFKKNNSLQDVKTISQSLLNDSYYLHQTMLGTLGVGELEENKYDLILANPPYYQSKVM MEAAKDTGYYDLNGAGVESLFLEWILKSLKPGGTANVVLPDGIFSNYANSKLKEYMLNNF FIEAIISLPVGAFFNTPKKTYILTVRKATEREKEDNKKQDYPVFTYIATSIGESLDVYRF DIEDNDLKEAVAKYNFYRKEDKNNLRDLIKIHIESDPKLKLIDIKDFDKDKSWIIENFWS EEEKIEIGLKKAKKVVTVDEFQMLLDDMISLMNEFKEELEWLK >gi|325480382|gb|AEXN01000032.1| GENE 204 178245 - 178454 256 69 aa, chain - ## HITS:1 COG:no KEGG:Rumal_2514 NR:ns ## KEGG: Rumal_2514 # Name: not_defined # Def: XRE family transcriptional regulator (EC:2.1.1.37) # Organism: R.albus # Pathway: Cysteine and methionine metabolism [PATH:ral00270]; Metabolic pathways [PATH:ral01100] # 1 64 2 65 407 75 48.0 8e-13 MAISYKPLWHLLVEKEMNKEDIKRVANITSNIVSRMSKNSYVNLESLEKICLALDCKIED VVEIYKEDK >gi|325480382|gb|AEXN01000032.1| GENE 205 178845 - 179930 1370 361 aa, chain - ## HITS:1 COG:lin1135 KEGG:ns NR:ns ## COG: lin1135 COG1454 # Protein_GI_number: 16800204 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 4 357 5 374 379 250 41.0 3e-66 MTFSVKPTINVGDDSLEILNSLDVNKIFFVTDPFVVESRMIDQVTRLLDRNISYDIFSEI KPDPSQELIEEGKKALKASNPDLICAIGGGSAIDATKAIIYDIYNEEKTKKTFVAIPTTA GTGSESTNFAVVTVGNDKKVLIDDIMLPDYALLIPKFTKTVPNFITADTGMDVLTHAIEA YISKNSSIYTDTFSKTCIETVFEILPKVYDDGDRLKLREKMLEVSNMAGIAFNNAGLGIS HSLAHTIGGTFHISHGRLNAILLPYVIEYNCKNSEEARKKLDKLAQELNHRDYTCLIKVI KEMNQKFNIPEKLSGLGKIDEKSYHDAIEKMSLTALNDRCTPTNPALVTKFDLANILRDA F >gi|325480382|gb|AEXN01000032.1| GENE 206 179927 - 180787 806 286 aa, chain - ## HITS:1 COG:no KEGG:Olsu_0320 NR:ns ## KEGG: Olsu_0320 # Name: not_defined # Def: transcriptional regulator, MerR family # Organism: O.uli # Pathway: not_defined # 7 281 12 285 285 181 34.0 4e-44 MINKEKLYSIGQASNKADVSTRTLRHYETIGLIKPDLVKENGYRYYTEDTILLISIIKYL QFMDFSLDEIRDFIFNADYDDVSRSFNDLIKRTSNDIKRLEERLTIIKDWNELISEASSA FLIGNNTPSIKYIKKSDLISYPIDFSFYYEDTVLDLDFANFVKSKDNKITGPVMFYFDSY IKRLKYEKENRSIKGLYIQKAVKPILDKKITFTIKDGFYGSIYHFGKYENLSKSYEKLRT WAKKYRYKLSDEVIERFVVDSWTFRDEKKYVTEILIPIEMKVEENK >gi|325480382|gb|AEXN01000032.1| GENE 207 180797 - 181420 501 207 aa, chain - ## HITS:1 COG:no KEGG:Olsu_0319 NR:ns ## KEGG: Olsu_0319 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 28 183 49 209 237 104 35.0 2e-21 MRYLFTNIDKNLMKDIVKDYNLSCIFDELSWILDFEWKNFDQIRGINGRAVCQDSPKEFF IMRLAQYLAYNKKVINYIYKDLKEAEKNSFNPIFDKYARMMEFTDKDKFISIKENLEVLS PVKLHLLENIKNILKIKSIDTPKELERVRPKESEDKRISSNDYYIAEISSLSLKSLWAIE EMIKDPSYNLEESIYENTKYLFKKLND >gi|325480382|gb|AEXN01000032.1| GENE 208 181422 - 182348 828 308 aa, chain - ## HITS:1 COG:FN0847 KEGG:ns NR:ns ## COG: FN0847 COG0457 # Protein_GI_number: 19704182 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 1 296 295 588 599 205 39.0 1e-52 MKGIELSKKYFNDIAYPIFKNTCPEILDIASIGLVGEGSECFGLDDDISKDHDFGPGFCI WLKEDDVKIYKNKIESVLKKLPKEFLGYERVDSKLSDKRVGLFSLEDFYEKYTSYRKFPI SDIDFLKIPESFLATVTNGEIFLDNCSLFSDYRKYLLDFYPEDVVRKKLAAYLFQMAQAG QYNLKRSLDRSDISAVFFAKAEFMEALFGVLFLFAKVYMPYYKLRYKRLVQIKYYPDQLF EDMNKFFLSNDKKDLVYLSEKLSLYVKDILKYRSITRSDDDFLLNHAIEIQNSIKNPQIR AINLVKGN >gi|325480382|gb|AEXN01000032.1| GENE 209 182345 - 183136 802 263 aa, chain - ## HITS:1 COG:no KEGG:Olsu_0317 NR:ns ## KEGG: Olsu_0317 # Name: not_defined # Def: Tetratricopeptide TPR_4 # Organism: O.uli # Pathway: not_defined # 4 255 2 254 263 75 28.0 2e-12 MKYDLSNFYKDLKLKFNKSNGKEVILFLMEEFSKTISLKDERAIIAVGNELASFLRVKGQ TDFAYKIYKVIQKLVLDSYGFISKDYASLLINISNCDIVAKNYDMAIKNLNETENILKEL EDTKYLMASVYNNRSQAYRAKNMLDLAQEDIENALKIIENEEKIAVSKINLAEILILKKK FGKALVNANEAIFYYEKNKLRLPHLANAYATAANIYYNNKEYYTSIYYYEKALEVFDETV GKGPVRDILVKNLNQAKKQRDMS >gi|325480382|gb|AEXN01000032.1| GENE 210 183142 - 183417 653 91 aa, chain - ## HITS:1 COG:FN0083 KEGG:ns NR:ns ## COG: FN0083 COG4577 # Protein_GI_number: 19703435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Fusobacterium nucleatum # 4 90 6 92 94 105 89.0 2e-23 MNEALGMIETKGLVGSIEAADAMVKAANVTLVGKEHVGGGLVTVLVRGDVGAVKAATDAG AAAAQRVGELISVHVIPRPHTEVETILPKNK >gi|325480382|gb|AEXN01000032.1| GENE 211 183459 - 185051 2155 530 aa, chain - ## HITS:1 COG:lin1143 KEGG:ns NR:ns ## COG: lin1143 COG1012 # Protein_GI_number: 16800212 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Listeria innocua # 1 457 1 459 486 440 49.0 1e-123 MAELDFDLSSIQAARDLARKGAEAEKKLKNYTFDQIDKIIKAIAEAGEIHAKELAEIAVE ETGFGKVEDKIYKNHMASGLLYEEIKNQQTIGIVDADQEGQVITIADPVGLVMGIVPSTN PTSTVLYNSMIAIKSRNPIIFSPHPKASKCTSRAIEIVNEAAVKAGAPENIVQGLTKLSM DATNELMHADEVKLIIATGGPAMVKAAYSAGKPAIGVGAGNSPAYIEKTADIKKAVRNIM ASKTFDNGTICASEQSLIVERSNRQEVVSEFEKAGAYFMTDEECKKVCALLFRNGTAMNP NFVGRSAKVIADAAGISIPSGTRVLVGEQYGVGKEYPLSYEKLTSVLGFYTVNDWKEACD LSFKLLENGIGHTMSLHTEDKEIARKFAIKPASRILVNTGGTMGGTGLTTGLPIALTLGC GTMGGSSVSENVGPKHLVNFKKLVYGVKDADKLVEEDELFKKYHGNNSSINNNSLPNYGN QPKYFEYSTGCNNCKTEEEKRSSNFNETGEINLEELKEMVDSLVNAFKGE >gi|325480382|gb|AEXN01000032.1| GENE 212 185079 - 185489 727 136 aa, chain - ## HITS:1 COG:FN0083 KEGG:ns NR:ns ## COG: FN0083 COG4577 # Protein_GI_number: 19703435 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Fusobacterium nucleatum # 44 133 1 90 94 113 85.0 8e-26 MTEKKQEVAKKTEATKDQEVKTEVSKKNTNKNVKKEEKKETKKMAQLDALGMIETKGLVG SIEAADAMVKAANVTLMGKENIGGGLVTVLVRGDVGAVKAATDAGAAAAQRVGELISVHV IPRPHTEVETILPHKE >gi|325480382|gb|AEXN01000032.1| GENE 213 186144 - 186452 421 102 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848999|ref|ZP_08170509.1| ## NR: gi|325848999|ref|ZP_08170509.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 102 1 102 102 133 100.0 4e-30 MKRLISQEEVLNNKNEKEIYIDDNTIITAAAKDLAKEFGIEFKKCDCKSQKNDIEEKKKE VKQSQDCKKSSAVLSEDQIYKILKKGIEQGLLSESDIERMIG >gi|325480382|gb|AEXN01000032.1| GENE 214 186586 - 186729 115 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696372|ref|ZP_03304500.1| ## NR: gi|212696372|ref|ZP_03304500.1| hypothetical protein ANHYDRO_00909 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1427 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00909 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein HMPREF9246_1427 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 47 1 47 47 87 100.0 4e-16 MVIAKLIGNVWATRKYDSLNGLKFMLVEILDGSEKIKNSSSRYNRCW >gi|325480382|gb|AEXN01000032.1| GENE 215 186723 - 187016 560 97 aa, chain - ## HITS:1 COG:no KEGG:Olsu_0310 NR:ns ## KEGG: Olsu_0310 # Name: not_defined # Def: microcompartments protein # Organism: O.uli # Pathway: not_defined # 1 89 2 92 101 96 57.0 2e-19 MDIRLIKAPSPATLDIVKNRSKLKIETNPGAMGLVQGKLIEMTLASDIAYKTSGVEVIDV RGSCPQNMIMLAIIGEMEEVKVALRNIEEKIKEKDIW >gi|325480382|gb|AEXN01000032.1| GENE 216 187006 - 187650 683 214 aa, chain - ## HITS:1 COG:FN1783 KEGG:ns NR:ns ## COG: FN1783 COG4820 # Protein_GI_number: 19705088 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein, possible chaperonin # Organism: Fusobacterium nucleatum # 1 205 66 270 274 180 48.0 2e-45 MVVDYIGACDIVRKLKNQLEEKLGEELLIAGCAIPPGTENIDGGAVKNVAESSGFIVEKV LDEPTAANKLLNLDNGAVVDIGGGTTGISIIKNEKVVKVLDEPTGGTHFSLVLSGAYKID FDSAEKLKRDFSKHKEIFPVVRPVIDKIISIIENSSKDQEIDQIVLVGGTALLSGMEDYV SKKTNIKTLKPSNPMFVTPIGIALSLIEDQKNGY >gi|325480382|gb|AEXN01000032.1| GENE 217 187847 - 188395 474 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848839|ref|ZP_08170349.1| ## NR: gi|325848839|ref|ZP_08170349.1| hypothetical protein HMPREF9246_1430 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1430 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 182 1 182 182 221 100.0 1e-56 MLFITEENLRYQYKKSPFDSYIIEKGSKLTPQARQFLLDFRIDIIDKSKPKKIKKEEIKL KDNPDSKKSDDDKLDKKVVLIIKKLALELRDFDHEFATYLNNLAIKIYKNEKIDLEEKEG KKEEAINIYINMNLDNPYLKSFVSIDEAIEKLNKIKEENNEDFIDKLASILYIWFINISK GG >gi|325480382|gb|AEXN01000032.1| GENE 218 188383 - 188838 466 151 aa, chain - ## HITS:1 COG:lin1109 KEGG:ns NR:ns ## COG: lin1109 COG4917 # Protein_GI_number: 16800178 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 3 143 2 143 143 75 28.0 2e-14 MRRKWLIAGNDGVGKTSLASLIEGVDLKAKKSLDLQFRDKTIEVSEGYIENPYLNSALIM VGQNQALVNIFMIDLEKDCHFPPNFAKSFTRPTITVINKIDLYDKKQVKKLRQIAEAIGS DHIFEISIKKGTGLDKLREYIKEIEDERCFL >gi|325480382|gb|AEXN01000032.1| GENE 219 188835 - 189173 508 112 aa, chain - ## HITS:1 COG:STM2055 KEGG:ns NR:ns ## COG: STM2055 COG4810 # Protein_GI_number: 16765385 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Salmonella typhimurium LT2 # 6 112 9 116 116 109 49.0 1e-24 MENLQRIVQESVPGKQITLLHLISSPDPSVNEKIGLDKGNAIGIMTLTPTESSIIAADVA AKAASVEVCFIDRFNGCVLLQGDNESVKQSLEAVKNTFESMLKFTSCPVTKS >gi|325480382|gb|AEXN01000032.1| GENE 220 189182 - 190144 941 320 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 14 286 6 271 302 204 39.0 2e-52 MDVDSKKEGIERTARIFNTQKYNVHDGPGVRTLIFFKGCPLRCKWCSNPEGLKSEYQVMI KKNACINCGQCVDVCPKKIHYMENGIHKVHRDITCIGCRRCEKNCLQKAIEIVGEDKTIT ELMDIVKEDKDFYMMSGGGLTVGGGECSAQAESLKSLLEASHMDGINTAIETCGYMPRKS LDLIKDHVDIFLFDIKQMDPVKHKYWTGVNNERILSNLRYLLESGKKVRVRMPILKGVND SHEEIMAVVDFLEDFKCFKNFDGIDLLPYHRYGVGKYEQLDMDYPMDSEMEGEFALSNEQ LDAIQKWIDENKIEVNLVRH >gi|325480382|gb|AEXN01000032.1| GENE 221 190162 - 192711 3106 849 aa, chain - ## HITS:1 COG:SP0251 KEGG:ns NR:ns ## COG: SP0251 COG1882 # Protein_GI_number: 15900186 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Streptococcus pneumoniae TIGR4 # 45 848 3 810 812 455 34.0 1e-127 MDLREFSKKLAMATEHMSDSEKESVRQLFEKVQDQLNKEDNNNTNLNVGIQSEGTEIPDG PTQRLVDLKANFLKQVPTITLHRAKIVTELTRENPGMPKNVLRAKAFRKNCETAPLVIQD NELIVGSPCGAPRSGAFSPDISWRWLRDELDTIENRPQDPFHISEEDKQYCKDVLFPFWE GRSLDEVCEDQYRDAGVWELSGESFVSDCSYHQVNGGGDSNPGYDVILMKKGMKDIQQEA KDHLEKLDYSNPEDIDKIYFYKSVIETTEGVMIYAKRLSEYAKQLAQKETNPKRKMELEK IAEVNAYVPANKPRTFWEAIQAVWTIESLLVVEENQTGMSIGRVDQYMYPFYKADIESGR MNDYQAFELAGCMLIKMSEMMWLTSEGSSKFFAGYQPFVNMTIGGVTREGVDATNDLTYL LMDAVRHVKVYQPSLATRIHTKSPEKYLRKIVDVVRAGMGFPACHFDDTHIKMMLAKGVS VEDARDYCMMGCVEPQKSGRLYQWTSTSYTQWPIAIELTLNHGVPLWYGKQVTPDLGSLS NFDTWEKFEKAVKEQISYITKLTAAATTISQRVHRDMAPKPLMSVMYEGCMEHGKDVSAG GAMYNFGPGVVWSGLATYADSMAAIKKLVYDDKKYSLEQLNEALKAEFKGYDQIKRDCLD APKYGNDDDYADSICNDIINFTEREHAKYRTLYSRLCHGTLSISNNTPFGQMTGASANGR DAWTPLSDGISPTQGADFNGPTAIIKSVSKMANDSMNMGMVHNFKIQKGILDSIEGENAL VTLLRTACMYGNGEMQFNYLDNETMLDAQAHPEKHRDLVVRVAGYSAFFVELCKDVQDEI ISRTMLEHF >gi|325480382|gb|AEXN01000032.1| GENE 222 192720 - 194153 1271 477 aa, chain - ## HITS:1 COG:lin1143 KEGG:ns NR:ns ## COG: lin1143 COG1012 # Protein_GI_number: 16800212 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Listeria innocua # 1 474 1 486 486 197 27.0 3e-50 MKVIDTDLLSVQQARILLEQAESSKESLLEIDKEERNDLLNKIKQYYKANIDQLAKMSFE ETSYGRYEDEIKLGKYYLDNIDNELDSYPNIFDIVSGQNSRQVALSKGLSLVFISPYLST LTCFQAIYFAIRALNPLIIVSDTRCEKTVTKMVEDIKKILKEDFYPRGFLDILTYNSDLG EKTLYESDKVSFILENLLSEDKREIQNDQAQIFKAEIGNNIVFIDKDCDIDKASCEVINS KAFNNGLLPGVEQSVVVEENAYDQVVQKFKEYGAYFLSKDEHIKLEKILYDKNYNCRKEL IGRSAKQIAEIAGIKVNSDTKILVVTKPYVSENSPYSKEKYNPILSLYIENDWLNACEKC VELILNDKKGQSLSIYSNDSYVIEQFIEKKPVARVLVNAPTGLGSVGIGTNLPISFSLST KKIEGLNQTSLTPNHFMKFREIGICDEKDINSFLSKKTVKKDKDLFEKILNSLEKNY >gi|325480382|gb|AEXN01000032.1| GENE 223 194163 - 194453 500 96 aa, chain - ## HITS:1 COG:all0867 KEGG:ns NR:ns ## COG: all0867 COG4577 # Protein_GI_number: 17228362 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Nostoc sp. PCC 7120 # 3 89 4 91 114 73 48.0 1e-13 MQALGGIETFGLVYVLEAADAMEKASGVEIVGYENVASGYISVLVKGDVSAVESAVEAGV KAVEAMGAEVYSSLVIPSPHPDLEKVTEIYNLDNLI >gi|325480382|gb|AEXN01000032.1| GENE 224 194462 - 194755 496 97 aa, chain - ## HITS:1 COG:all0863 KEGG:ns NR:ns ## COG: all0863 COG4577 # Protein_GI_number: 17228358 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; C Energy production and conversion # Function: Carbon dioxide concentrating mechanism/carboxysome shell protein # Organism: Nostoc sp. PCC 7120 # 5 92 137 224 271 72 47.0 1e-13 MQYESQAIGLIETLGMLPAIKALDAMLKAADVKLVSYENIGSTLVTVIVRGDVSSCISAV EAGVAEGEKIGKITAHNVMKRPVTNVSKVISVHKVED >gi|325480382|gb|AEXN01000032.1| GENE 225 194764 - 195027 421 87 aa, chain - ## HITS:1 COG:no KEGG:Dred_3284 NR:ns ## KEGG: Dred_3284 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 3 86 2 86 88 73 50.0 2e-12 MRRPLNYEILKYFTNVDKASANDVYLALEDEFKDHKAFTKENIIESLMTAKENGLVDEDS YTLIDGELVVYYKASEDQKNTINSYIK >gi|325480382|gb|AEXN01000032.1| GENE 226 195027 - 196118 1398 363 aa, chain - ## HITS:1 COG:FN1669 KEGG:ns NR:ns ## COG: FN1669 COG0697 # Protein_GI_number: 19704990 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Fusobacterium nucleatum # 24 327 2 284 308 100 29.0 3e-21 MEKTKNYSDAVSKAESTKKKLDKKYFNKGLNIGIQSGIYYGLYTALVTTATVYGIWKYWY SGEAGLSDITIAFILGTLATGINDLTSAIWALVNSIIKGKFGDFLKTLKTKPGMIMVFAA VVGGPIAGVTYILAVQMGGPVVIPIAGLNVAIGAILGRVILKQELSARTILGIVICLASS LLIGATSLTGEVKDGMVLGIILAIVAAFGWGLEGVIAGFGTSMIDSEIGIAIRQTTSSLT NLLIVLPIFGVIEGSGIHLISKLFVNAITDPTILILFASGFFTFISFAFWYKGNSMCGAA LGMACNGTYTFWGPFFCWIILGIILKNPGYEIAPIAWIGSLLMALGIFIMSVNPLDYLKR GNK >gi|325480382|gb|AEXN01000032.1| GENE 227 196408 - 196512 120 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVDLSNYLSYSDYSYFSKVFKKHEGMTIENYKKT >gi|325480382|gb|AEXN01000032.1| GENE 228 196610 - 197380 604 256 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848748|ref|ZP_08170258.1| ## NR: gi|325848748|ref|ZP_08170258.1| response regulator receiver domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] response regulator receiver domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 256 1 256 256 330 100.0 5e-89 MFNLMIINNQSLTRKTLIKILEESKMAKDIITKNTIDEGLSYLDKNSVDVIILEVSMQNS KFLNFIEKIKLKNKKIKIFLLSRDINLTNINKLNLDFNDIIKKPISKKDITNKLIKLKEE SININLDDFLTEFNIKLKERDFLKSLDILKTKLNEVCLDKSSKLQRKKLEFVLEKILIKE KIGNINLSNYFSKNMTNSKILDIIAFEFLKDLYQVKACKDFSILEDVFIYINNNIYKNIS LNDIVKKLCHISGLFK >gi|325480382|gb|AEXN01000032.1| GENE 229 197381 - 198637 1008 418 aa, chain - ## HITS:1 COG:lin1114_1 KEGG:ns NR:ns ## COG: lin1114_1 COG4936 # Protein_GI_number: 16800183 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Predicted sensor domain # Organism: Listeria innocua # 29 160 12 135 149 72 32.0 1e-12 MKNMSNHSNSNQDIRDGIDLLSIFGKEKLEQIQKLISDVTGIAFVAIDYKGEPLTKMTNF TKHCASIRKNPICKRICELSDASGAIRAAVTKKTSIYLCPFDMLEVAIPIIIDDTYLGAL VGGQIDCPNPPDDILKIEEKWILGNEKIEDLENKKDLSSGKVLKYQDFVNSVKLVEFIIT EIISKEIQIRNMEKSYKNNISILEKDISLLEKSNKNLEERLQVLGNNINKNVINDLLEIL SNLSILADKNLMNFYIDNLVFFAINFVNKTILPIDEISDLVKSYLEIKKIQYSDRFTYNI SVDQSISNFIISYRPIIIYTVLMANISLKYLDDPYHMDLNISSKENKIIIKISDNGIGVG EKSMGILKKTYMTEYESIEISSYLAYIKHIIEDSKDKEVRIIKENNKNQVLIKYEIGD >gi|325480382|gb|AEXN01000032.1| GENE 230 198722 - 200038 745 438 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148544941|ref|YP_001272311.1| 50S ribosomal protein L29P [Lactobacillus reuteri DSM 20016] # 5 438 38 474 477 291 38 2e-77 MTNLGVYSSVCEIIEKSKIAYKSYREFGLANREKIIENIRRTLSNYTDKLAEMSFSEINM GKLDDKKEKIRLSIEKTPGTEDLVSEVYTKDRVMTLYEYSPYGVSAALLPSTNPVATVIN NVIGMIAAGNSVVLCPHPRAIEVTKFLTGLLNKIIIESSGIENLVTCLDDLSIKNINELM NHPELDLLVVTGGSYIAKEAYKCNKKVISAGPANPTFIVDETADIDDAARKIVKGASFDN NILCVTEKNIVVVDPIYEKLKKSLISQGCFYIDNVVDMLKLTKVVLTEDFKINKFFGGKS VGEILNYAGIKNDGDYKLIAVDVPKIHPLATEEQLMPILSVIRESDFDEALNTAILLEQG LYHTAGIHSNSIRRMNIAAKELKTCIFVKNGSSLDGIGFSDDNPVSFTIANKTGEGSTST RNFAIKRRCVLVDGFSIR >gi|325480382|gb|AEXN01000032.1| GENE 231 200091 - 200687 596 198 aa, chain - ## HITS:1 COG:lin1116 KEGG:ns NR:ns ## COG: lin1116 COG4816 # Protein_GI_number: 16800185 # Func_class: E Amino acid transport and metabolism # Function: Ethanolamine utilization protein # Organism: Listeria innocua # 6 198 75 267 267 261 69.0 5e-70 MNLGKYRSLGIIGSRTGAGPQIMAVDDAVKATNTEVLAIEMPRDTKGGGGHGVLIYLGAD DVSDVRRAVEIALEATPKYFGDVYGNEAGHLEFQYTARASYCLEKAFSTPLGKSFGMVIG SPAAIGTVLADTAVKAANVDIVGYSSPAHGTSFSNEVILCFTGDSGAVRQAVKTSIDLGK KLLSTLGEEPVSSSTPYI >gi|325480382|gb|AEXN01000032.1| GENE 232 200862 - 201779 862 305 aa, chain - ## HITS:1 COG:AF1450 KEGG:ns NR:ns ## COG: AF1450 COG1180 # Protein_GI_number: 11499045 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Archaeoglobus fulgidus # 9 305 5 300 302 232 39.0 8e-61 MDSIDYKKQGVVFDIQRYSINDGPGIRTIVFLKGCPLRCAWCSNPESQHPNRELLYRKML CIHCNLCLKACKQGALDPSNPNLIDREKCILCEDCANICPTGALEVKGKNMTVEEVINEL KKDESYYHRSNGGITLSGGEALMQADFCRELLKACKARGWHTAIETEGYASKDAINKVMP YIDLALLDCKASNDEIHKKWTGVSNKLIRENSYLIQDITHTIIRIPTIPTVNSDINEYRD MIKFIKTLPKVKEIHILPYHNYGEKKYELLGRDYKLKNIGKVDEKHIEKLKQLVESEGFI CEIGG >gi|325480382|gb|AEXN01000032.1| GENE 233 201792 - 204368 3016 858 aa, chain - ## HITS:1 COG:pflD KEGG:ns NR:ns ## COG: pflD COG1882 # Protein_GI_number: 16131789 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Escherichia coli K12 # 10 858 2 765 765 544 36.0 1e-154 MIERGFSKPTQRVERLRKVIINATPEVEADRARLITESYKETEGMSNILRRAKACEKLFK NLPVTIREDELVVGSLTKTPRSTGLCPEFSYSWVADEFDTMATRSADPFLIREETKEELK EIFKYWKGKTNSEYADSLMSQEAKDCIENGIFSVGNYFYGGVGHVTVDYGKILKRGFRGV LEEVILAMRKLDDKDPETIEKMQFYKALIITYTAAIKFAHRYSEKARELADKENDIKRKE ELLKISDICKKVPEYGADTFWEACQSFWFIQLMVQIESNGHSISPGRFDQYMYPYLKNDS IDRELAQELVDCIWVKFNDINKARDEVSAQAFAGYSMFQNLCVGGQDIHGLDATNDVSYM CMESVSHVALPAPSFSVRVHQNSPYEFLLRACEVSRLGYGVPAFYNDEVIILNLVSRGVK LEDARDYSIIGCVEPQASHKTEGWHDAAFFNAAKVLEITLNNGRCNGKQLGPVTGEITEM TSIEQIIEAFEKQMAYFVKYLAEADNCVDYAHMQRGNLPFMSALVDDCIKRGKSSQSGGA LYNFTGPQAFGVADSGDSLYAIEKNVFENKRISLEELKEALENNFGFTDSIMPGPCGGDS VSAKVGQLSEAEIYDAIKKILSNSDTTDVDEIAKKLELNNTANSSYQSACGCSANETGRF KTIQKILDNTGSFGNDDQGCDEFAIRVAQIYCDEVDKYTNPRGGAFQAGIYPVSANVLFG KDVGALPDGRLAGAPLADGVSPRQGKDANGPTAAANSVAKLPHFQASNGTLYNQKFSPKS VEGEKGLKNFVSIIKSYFDHKGAHIQFNVIDRQTLIDAQENPQDHKDLLVRVAGYSAHFV TLAKDVQDDIISRTEHTM >gi|325480382|gb|AEXN01000032.1| GENE 234 204685 - 205143 557 152 aa, chain - ## HITS:1 COG:L0288 KEGG:ns NR:ns ## COG: L0288 COG0494 # Protein_GI_number: 15673103 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Lactococcus lactis # 2 152 8 155 155 90 37.0 1e-18 MKIRLMNMVKIYDEKNKKVLVLDKKKKYGWEGLTFPGGKVEENESFENSVIREAKEETNL DIKNPELIGIITWTFTNDEGEFQKDVGLLYQTKDFSGKLIEDNREGKLFWKDYEEFKKME KMSESMPEILKIYDGKYREIYWDIDKNTKKFH >gi|325480382|gb|AEXN01000032.1| GENE 235 205196 - 208306 3461 1036 aa, chain - ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 4 1009 2 1006 1035 976 47.0 0 MASFKSLDTKNTKQRELDLSKYWADIDLLDKTFTTRKDAEEYIIFDGPPTANGKPGIHHV IARTLKDMTSRYKNMKGFKVLKKAGWDTHGLPVEIEVEKELGFSEKDQIEEYGVEKFNQK CKDSVFKYSDMWRDMSDRMAFLYDMDNPYITLDNDYIETEWWLLNQAFKKGLIYEGAKVM PYCPRCGTGLASHEVAQGYQMDKAITLICKFKKKDADNEYFLAWTTTPWTLPSNVALTVH PELDYVKVNDKTDGCYYYLAKSLLEKVMADHEYEVVEEMKGKDLEYVEYEQLLPYVKPDG KAFFLTCADYVSAEDGTGIVHTAPAFGEDDYQLGRKYNLPFVQPVDLEGCFTETPWKGKF IFDTNEEIFLHLRDEGKVYKKQTIEHNYPHCWRCKTPLVYYAKPSWYIEMSKLSEKMVEN NNGVNWYPQTIGDKRFGNWLENVKDWAISRSRYWGTPLNLWRCDDCGHVESIGSRKELAE KAREDISEDIELHRPYVDDVTITCPDCGKVMHRVPDVIDVWFDSGAMPFSQVHYPFEKGE DLDDYFPADFICEGIDQTRGWFYSLMAISTIITGKAPYKNVLVNDLVVDKNGQKMSKSKG NTLNPFELFDKYGADAVRFYSLYVSPCWVPTKFDEKGLIEVKNNFFRTIENVYNFFALYA NTDNIEIDEIKNFENVELEEIDKWLYSKLNSLLKAYYEQMESFDYNKVVHLVNDFVVEDL SNWYIRRNRKRFWSQDLTESKKAVYKTCYDVLLSLSKMIAPIAPFISEEIYRNLTNGLSV HVEKLDEVNEALIDEKLEEKMDLVRKMVTLGRASREKESIKVRQPLEKIIVDGSFKDTIG DLTGLIKEELNIKEVEFADDLSDFMDYYLKPNFRKVGQIFAKNVGAFGKFLAGVDAKEFV EKVENSPQEIEINEEKYTVEKDYLDVRIQAKDGFDVEMDGNVFVVLDTEITEELKKEGYA REFVSKIQNLRKDNGYEVTDRIEIFYNADDELKNALKEFEEEIKKETLADSMEVKDLDTE EFELNDKTVKIELERK >gi|325480382|gb|AEXN01000032.1| GENE 236 208608 - 209021 621 137 aa, chain - ## HITS:1 COG:BMEI0697 KEGG:ns NR:ns ## COG: BMEI0697 COG2510 # Protein_GI_number: 17986980 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 2 137 6 141 143 110 52.0 7e-25 MWLILAILSSVFAALTSILAKVGIDGVNSNLATAIRTFVVLLMSWGMVFITSSFSGIYNI SKKSWIFLILSGLATGASWLCYYGALKYGDASRVVPIDKMSVVLTLILAFLFLGEDLSMK SIIGSILIGAGTLLMVL >gi|325480382|gb|AEXN01000032.1| GENE 237 209213 - 210481 1567 422 aa, chain - ## HITS:1 COG:L81189 KEGG:ns NR:ns ## COG: L81189 COG0044 # Protein_GI_number: 15673051 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Lactococcus lactis # 1 419 21 439 441 425 53.0 1e-119 MLIKNGRVIDPKSGFNEISDIYIENGIIKEISKNINLEDENVIDAKGLIVSPGLVDIHVH FREPGQTHKETIETGSNAAAAGGFTSVVAMANTKPIIDNVETLNYVNEIMKKQKIKVYSA AAVTKGFKGKDLTDMPSLKKAGAVVFTDDGIPIKDYEIMIEAMKEAKKLGMTISLHEEDN YFIKNPGYNKGQIAKSLGIDGAPNVSEDLMVARDGLLALDLGAKIDIQHISSKNSVEIVR SLKKLGANIFAEVTPHHFSLNEEAILEKKTLAKMNPPIRSEKDRLSIIEGLKDDTIEVIA TDHAPHTFEEKNVEDIRKAPSGIIGLETSLSLAITNLLRPGYLSLEKILEKMTYNPARFL NLDAGQIRIGANADIVIFDKDELVTYTDFKSKSSNSPFINKPLFGSVKYTIVDGKVVYRN EV >gi|325480382|gb|AEXN01000032.1| GENE 238 210898 - 211182 351 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848755|ref|ZP_08170265.1| ## NR: gi|325848755|ref|ZP_08170265.1| hypothetical protein HMPREF9246_1450 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1450 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 94 1 94 94 145 100.0 9e-34 MQGFFDLKFNPISYENLDKVEIKVYEYYDVEKLRFIEEFNDFDGIVLSFMDENFYFLRSD FTSDIKMLEKALEISNVDSWDNFSIDKFRLKIHK >gi|325480382|gb|AEXN01000032.1| GENE 239 211166 - 211390 330 74 aa, chain - ## HITS:1 COG:no KEGG:Apre_0283 NR:ns ## KEGG: Apre_0283 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 74 1 73 161 65 48.0 9e-10 MDDYVKLAKESIEYYLENKTYLRDFDKKFKEKSNGIRVEVKIDGRLKGISGSIYPTKENI GLDIIYEAVNAGFF >gi|325480382|gb|AEXN01000032.1| GENE 240 211390 - 211860 431 156 aa, chain - ## HITS:1 COG:FN2007 KEGG:ns NR:ns ## COG: FN2007 COG0386 # Protein_GI_number: 19705303 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Fusobacterium nucleatum # 2 156 19 197 199 199 58.0 2e-51 MIYDFVVKNNKGEDVKLEKYKGKVLLIVNTATKCGFTPQYDGLEALFEKYHHDGFEILDF PCNQFANQAPENDQEIDSFCALNFGTKFDRFQKIDVNGENEDPLYTFLKKEEGGILGGKI KWNFTKFLIDRDGNVVKRFAPTTKPEKIEKDIERLL >gi|325480382|gb|AEXN01000032.1| GENE 241 211993 - 213174 1683 393 aa, chain + ## HITS:1 COG:CC0615 KEGG:ns NR:ns ## COG: CC0615 COG1251 # Protein_GI_number: 16124868 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Caulobacter vibrioides # 5 364 11 375 822 207 33.0 2e-53 MYDYLIIGNGIAGLKAAETIRKKDENSSIVIISKAADYTYWRTKLSELICKDFTNDDILV KKLDWYEKNNIDVKLKNEVDKLDLENKKAILKNGEEIGYGKALIATGSHPFVPPIKNIDT EGVFAIRTVDDLNSFKNHIKENKKVIIIGGGLLGLEAAFSIKNAGCDVLVIETFDYILGK QLDNELSLKLEKELNEAGIETSTGKNTSEILEKDGKVCGIKLDDGTEIEGGTILVQTGVR NDLDVAINSGLKTERGIIVDETLKTSDENVYAAGDCMQLGQATIGLWTASMEMGEIAGSN MTGDDKTYQTPKPFSSLLLGDIKLFSAGFNKGEGIEEVKKEDGEKVYKLFKKEGKYLGGI LYKDIKFQNDVKKIVFEGEDPKNTKLGKEIFGM >gi|325480382|gb|AEXN01000032.1| GENE 242 213208 - 214428 1284 406 aa, chain - ## HITS:1 COG:VNG1811G KEGG:ns NR:ns ## COG: VNG1811G COG2312 # Protein_GI_number: 15790722 # Func_class: R General function prediction only # Function: Erythromycin esterase homolog # Organism: Halobacterium sp. NRC-1 # 60 304 51 329 434 87 22.0 6e-17 MKKIFKILLYIIISISVLGFLFIFLWTKIPEFKAKKEISDLGKYAQKIEDIKIDDQVEII GLGEATHGNKEFQELKLTLLKKLVKDANVRAFALECDFSEGMEIDSYVKSGKFQKNPSKI FSFPIYHTNQMNDLINWIKKYNQNHEQKISFYGFDMQNPEKSVKLLKDFVKKENIDFDIK SLEILEEDNISIKDPKIKILEENLKKLNEKLEENTKEKRLIENILSSFPYYNMVGDYVKS SEYRDKKMAENVSWIKDYEKDSRIMIAGHNGHIGKKEAMYKNMGENLLEKYKKSYFPIGT DFYKTKVNIKTMQKNQRTIQKFISADPFAYQAKNYNNSYYLDFSKVKDGDSKNLLDSKIK MGSLGEGYTPIMKFVPYSYRIEKSPKEIFDSMIFVYETSPIEIIEN >gi|325480382|gb|AEXN01000032.1| GENE 243 214431 - 216416 1504 661 aa, chain - ## HITS:1 COG:SP0913 KEGG:ns NR:ns ## COG: SP0913 COG0577 # Protein_GI_number: 15900794 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 648 1 652 662 212 27.0 2e-54 MNKLNFKMAIRGIKNNKFLYLPYILASSFMFFIFNLLIDFRSEKFIMETRGSEVIKSLLE VGSWIVAIFSLIFLVYMAKTIVKNRYKELGLLYGLGMDKKSLRKILIIENFILGILVLII GTFFTILLGPLFINLVAKILKIQTEIKLSINFEILKLGLLVFCGIFLLITLISLNSIRKS NPIELSKLSQKGEKEPKANIISMIFAIILIGYGYYTALTIDGGMLQALPKFLPASLSVII GTYFFFRSLVIWILKLLRKNKKIYYKSTNMTFIGELIKRSKESAMALSSITIISSLFLLS FVVMSAMFVGKNELLDRIAPSDFLIQYEDKNEKSEDIGKNIIDKKLDKEKIKNLGQFKRL GLIVNEKSAGKFSILRDDDLRKSIMDEKTKIISLTDIKSFNMANKTNITLNKNEAVVFDS KAKKYEKISINNQTLKVKENVKNTSYVLMDPTTSLFHNLILVVDDMDEFSKKISDGKNIN TFPSVSGIYFDLKDKSQKNIDYMDKKLNENISDNILVKNSIENRMEFDKMHTGAYIVVTI LALVFLTSTIVVIYYKQAAEGLEDGRNIKILQKVGMSKKEIKKSVKKQNYFTFFGPLIIS IVHILVASKLAFGMIQLFAMLELRKFVEIEAICIIIFSLIYIMIFRITLPIYFEMGKLNK E >gi|325480382|gb|AEXN01000032.1| GENE 244 216403 - 217176 247 257 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 222 12 221 312 99 31 1e-19 MNILEVKNLRKVYNSEDKNTQVVALKDINFEVEEGEFVAIMGESGSGKSTLLNLIASLDT QTAGDVILSGENTKNKSDKERAKFRREKLGFVYQDFSLLSSLNNRDNIFLPLVLANEKYK IMEEKLNPLARALKIENLLDKFPYQISGGQKQRVAVARSLITNPKILLADEPTGALDSNS SMELLNIFEKINKNGQTILMVTHSTMAAARASRVLFIKDGKIFYDLYKGDRSNDQMYEKL VKSQMMILSGGEGFEQA >gi|325480382|gb|AEXN01000032.1| GENE 245 217647 - 218399 630 250 aa, chain - ## HITS:1 COG:L0132 KEGG:ns NR:ns ## COG: L0132 COG0642 # Protein_GI_number: 15673728 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Lactococcus lactis # 15 240 68 288 291 138 37.0 8e-33 MEKNSFSFFEKNLYERHLKDIFERKEKEIENLRISSKLRQNDLENLLTIWTHQIKTPLSS ISLISEREENYDIKRELIRIDDYIASILSFIKLGQDSLDYSFKSFSIERLIKDIVKRYRS FFIHKNLKLILDIEDENIISDSKWLGLVLEQVLFNAIKYTDKGFIKISYHDSILKIEDSG IGIKKEDLKNINKFGFSGDSDKRDANSTGIGLFLVNDILKKLGYEYKIDSKEKEGTVFSI NLKKAGIIEN >gi|325480382|gb|AEXN01000032.1| GENE 246 218587 - 219255 722 222 aa, chain - ## HITS:1 COG:SP1633 KEGG:ns NR:ns ## COG: SP1633 COG0745 # Protein_GI_number: 15901469 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 3 222 4 223 225 196 45.0 4e-50 MDIFIVEDDKKICEELSFQLGLLGYSCFMPDDFSNILDEFQKRDYKLVLMDLKLPFENGF YWCEKIREISNLPIIFLTSAADDINLINAINYGADDFISKPFSMQVLNMKIKALLRRSYD FSGKNFDLSYENISLIKDKMILKVDDKEINLSKNEFLILEILMENPQKIVSREAIMDKLW ATDSFIDDNTLTVNINRLRKKLKDFGLDDFIQTKKGVGYFIK >gi|325480382|gb|AEXN01000032.1| GENE 247 219525 - 220817 1959 430 aa, chain - ## HITS:1 COG:BH0774 KEGG:ns NR:ns ## COG: BH0774 COG4091 # Protein_GI_number: 15613337 # Func_class: E Amino acid transport and metabolism # Function: Predicted homoserine dehydrogenase # Organism: Bacillus halodurans # 1 426 1 426 439 353 44.0 3e-97 MFKINRKLKELKHNGERISLAIIGCGKMGASLINQLGDIDAIEVGIVIEHTLSKAKTALV DSGISEDKIISTDSYDEAYEALNKGFVVVSSNYRLAYKLLQITAVIDATGNPPFGAEIAA KSIQYHKHFITLNVECDAVVGPILYDMAKKAGVVYTGIAGDEPGSIIELCDFAYGIGLEI LVAAKGKNNPLDNYANAEILKDEAEKKGLSPRMLTSFVDGTNTMIELNSVCNCLGFLPDT FGCHGISTSPETAVEDFKLKEDGGVLSSYKTVEFSPGMAPGVFLIVTSDKKEVRDLMKFL GFGDGPNYLLNRPYHLTSLETPITIYNAVMENEPTIAPLHGQVADTVSVAKRDIKKGEYL DGIGSDKVFGKLTDHTRSIKEDLLPIALITKKTKAIVDIKKDTVIDLSMIELDEEETITK LRRRQNSMKL >gi|325480382|gb|AEXN01000032.1| GENE 248 220810 - 222015 1108 401 aa, chain - ## HITS:1 COG:CAC3590 KEGG:ns NR:ns ## COG: CAC3590 COG2081 # Protein_GI_number: 15896824 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 1 394 1 403 405 214 32.0 2e-55 MRIFVIGAGVSSLAFCSFLGNKNITVIESNKDSGRKLLATGNGRCNFTNLKLSYENYYSK EKDFVNYSLDNFSNKDLIKYFEYLGIDWTSLPSGRCYPKTMSAQSVKDSLMMKAEENAKF IFNEKIRDIDFDKKLIISENKKKYKYDILVIGSGGLTLKNSGSDGSILEILKNHTKIEEI TYGITNFKAKNPLSKRAKGVKVNARASLIIDGKYKKSSQDDIIFQNYGLTGTAILDLSNQ ISLALKDKKKVRLDIDFYPEYKKEGLLIKLEEKVKRFPQRSIEEILIGNLDKKLIIDIIK RAKINPREKNISRNDLNKLVNVLKNLSFDIIDINDKKNAQVSLGGVSCGEIDKKTMKSLK IKDCYFIGEVMDVAGDCGGYNIQWAFSSAKTASEDIRRLNV >gi|325480382|gb|AEXN01000032.1| GENE 249 222012 - 223442 1434 476 aa, chain - ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 1 476 1 481 482 275 35.0 2e-73 MKIEKILKEISYISKNIQNDKEIIGISSDSRQIKENYIFLANKGYEFDGHKYIDSAIKNG ANTIIYTNDDINFESGINYIKVKDQRLALAKISNLLSNYPSKSMRMIGVTGTNGKTTTAN LIAFVLNKLGSPCANIGTDGADLINKTMPTEHTTPEITDLNEILIKAKKENIKNAVMETS SHGLYLKRNYGIDYEYGVFTNLSMEHMDFHKTMDNYFKAKMILLNNSKKQVVNLDDDYGK RAKEIFKDALTISINEDSKYRAKNIKRVDLGLEFTVNGVKFHLNRFGQYDIYNSLCAIAI ANDLGYKLEEISKALEDFTGVKSRFEFIENKLGINIVVDFAHTPEAFENLFKDLPKDKKI YAVYGINGDRTYDIRKAVGKISAKYGVFSVITTDDPKFDTFENISQQIKEGVDENKGECI IIKDRKEAIKYGISHAKKGDFVFMLGKGEEKFLKFNGNIKTYYSERETIREVLEEL >gi|325480382|gb|AEXN01000032.1| GENE 250 223443 - 224627 1650 394 aa, chain - ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 4 393 7 396 404 355 53.0 7e-98 MFDFKSAKKRVDEAINPTHIFYSEIFSDLSKNNVYIKPENLQKTGSFKLRGAYNKISKMD EDSKSVGIVTASAGNHAQGVAFSANHQGIKAIVCMPETTPMIKVDGTLKYGAEVDLHGQT FDETNKYAQELAKEKGYTFIPPYDDEDVIEGQGTIALEILEKLEDADYILVPIGGGGLIS GIAKCAKEIKPDIKIIGVEPANAASMQAAMENGGPITLDSADTIADGTAVARVGDITYEI CKENVDEYISVTEEEIMVALTTLMEKHKLVAEPSGALSLAASKKLGCKNKNVVCVISGGN IDMSFISQLIHKGLYEDGRIARFTVELQNAPGKLRDLLDVIAYTKANIVEVIHDSLAATS RYKNIQVELTLETNGKDHIRKIKELLTEKGYNVH >gi|325480382|gb|AEXN01000032.1| GENE 251 224907 - 225137 367 76 aa, chain - ## HITS:1 COG:CAC2777 KEGG:ns NR:ns ## COG: CAC2777 COG0695 # Protein_GI_number: 15896032 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Clostridium acetobutylicum # 4 76 2 75 76 71 50.0 4e-13 MKKVTVYTSNTCPHCKAAKNYLRENNIDFEEKNVDEDRSAIDYLVEKGHRGVPVITIDGE DIVGFNKELVDEKLGL >gi|325480382|gb|AEXN01000032.1| GENE 252 225214 - 226062 748 282 aa, chain - ## HITS:1 COG:BH0057 KEGG:ns NR:ns ## COG: BH0057 COG0030 # Protein_GI_number: 15612620 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Bacillus halodurans # 2 279 3 288 289 225 42.0 8e-59 MKKLYSPKTIKLIQDLYGFKFTKSLGQNFLVDKNFVDKIIDLSEVSGENILEIGPGIGTI SQEMAKTCKKLVVIEIDKTLIPILKDNLGEFSNVDIINADILKTDLKKIIKENFSGEDFK VVSNLPYYITTPIIEKLFEEDLPCKDMTIMVQKEVADRMKADEKEKDYSSLSVFIKYYSE ITGQFKVPKSVFMPQPKIDSQVLKLNLRLYDEDVDVNSLFNIVRAGFNKRRKTILNSLSS VIEKEDLKKIFENLSLKENLRAENLSLDDFINIANEYEKIKG >gi|325480382|gb|AEXN01000032.1| GENE 253 226059 - 226589 648 176 aa, chain - ## HITS:1 COG:CAC2987 KEGG:ns NR:ns ## COG: CAC2987 COG1658 # Protein_GI_number: 15896239 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Clostridium acetobutylicum # 1 176 1 176 185 159 50.0 2e-39 MIKETIVVEGKDDITNIKSAIDCELIATNGLAFGKDLIERLKEIDKRCGIIIFTDPDFAG KKIRAKISKEIPNAKHAYLDRKKSIKNGDLGVENASKEDIIEALKNAHATKSEKREEFTM KDLLDNNLTLTNDSRKRREKLGDILSIGYFNSKQLLSKLNSFGISREEFEKAVEKI >gi|325480382|gb|AEXN01000032.1| GENE 254 226595 - 227359 676 254 aa, chain - ## HITS:1 COG:CAC2989 KEGG:ns NR:ns ## COG: CAC2989 COG0084 # Protein_GI_number: 15896241 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Clostridium acetobutylicum # 3 253 2 253 253 219 44.0 3e-57 MKLIDSHAHLTSDDFNEDRSFLIKDLSNFAVNCVIIPSSNLENSYKAVELSESFDNLYAQ VGFHPENIESFDETSIEKLENLAKNPKVVAIGEIGLDYYWKDDNKAEQKDVFIKQLDLAK KLNLPVVVHSRDSIDDCLEILKAYPELKVQIHCFAYSYMHLMECMKRGYYISIGGVVTFK NAENEKNAAINVDLDKLMLETDSPYLSPEPYRGRRNDPRKIVEVAREIANLRGMKLSKIA KRTSKNAKEFFNIK >gi|325480382|gb|AEXN01000032.1| GENE 255 227359 - 229296 2259 645 aa, chain - ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 2 531 3 530 536 580 52.0 1e-165 MDKNTYYITTPIYYPNSNLHIGNVYTSVIADVLKRYKTLQGFDSYLTTGTDEHGQKIMNA ALSHGSKPQPFVDKIAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYK GEYDGYYCESCESYFTESQLDEGNCPDCGRAVDHHKEESYFFKLSKYTDKLKELFKDHPE FLEPKFRQNEMLNNFINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTAIGY GHDMEKFNKYWPAGVHLIGKDIVRFHTIIWPALLMALDIPLPRKVFAHGWILFDNDKMSK SKGNIMYPEPLVELYGTDALKYFLLREFNFGSDGNFLSKKFMDRYNSDLVNDLGNLLSRT VSMISKYNDGIIKKGSETDSYDEDLINLCHKTYEDFTKLMDDFKFNEALECLWNLVRRSN KYVDQTEPWILGREEKYERLNTVLYNLAESLRIVAQMLEPVMRNTTEEILKQLGLENKGF ASAKEFGLIKEGTKVNKGQNLFNRLDTEKELEKLHDLNNKLVEERLGVKKEEKKEEVQAK AQIKIDDFEKLDLVVGKILEANDHPDADRLLVFKVDIGSETRTIVSGIKEFYKKEDLVGK NIVVIKNLKPVKMRGILSEGMLLAAGKDADLLTTIKDCKPGTVIS >gi|325480382|gb|AEXN01000032.1| GENE 256 229443 - 229991 624 182 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848856|ref|ZP_08170366.1| ## NR: gi|325848856|ref|ZP_08170366.1| hypothetical protein HMPREF9246_1469 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1469 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 182 1 182 182 209 100.0 8e-53 MLEKAKNIDLSDPKTYQDFSSIRILAEKVNSLKEKLEGLNKKIDQEKKNQEEILADLKQA QENQKIAKKNYKDALAEYLKAKDFQDLIGKTDNGKAKNKNTGKENIVKDQKDKDKKVSSK DKKNNRKTRAIKEEKILVSKDNKISYQNKNSNPKTGVEFGLSPYILGLFGAFAGIFKKKK DK >gi|325480382|gb|AEXN01000032.1| GENE 257 229969 - 230277 89 102 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFFAFSSKDLAVSSSILLSAICFSKLGINFFLFSNVFFASSRSFSQDFTFSRALLTWSKD FLLSLYLFSALKSDFLLSSNFSDKDFFSFLILSISLFKLLIF >gi|325480382|gb|AEXN01000032.1| GENE 258 230575 - 230736 116 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAISLSKLSISLFKMLMFCEIFVFSSDKFLSSALFEANLFSLSLLAFLNDFI >gi|325480382|gb|AEXN01000032.1| GENE 259 231008 - 231616 548 202 aa, chain - ## HITS:1 COG:no KEGG:Apre_0398 NR:ns ## KEGG: Apre_0398 # Name: not_defined # Def: chromosome segregation ATPase-like protein # Organism: A.prevotii # Pathway: not_defined # 11 191 470 629 1314 75 39.0 1e-12 MNKTNEDGSVSEGDARSLTNMKKAINALKVIQEKRQKDKGIDGRELSIFGITDYDMAVAQ ANANYASKYWDNKHSEVHPQQENLSTGTKGSSNPSDIVGDGNSYAKEALSGWWDAEKETF DKLRAQGLKNRHEMEDVYLNSLSKDQLKKLRLTDKVGHYTNLVDDLMWEKDRQDSSKYPG PSKSKSAGYGINIEEFQSKKMD >gi|325480382|gb|AEXN01000032.1| GENE 260 231619 - 232200 659 193 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848773|ref|ZP_08170283.1| ## NR: gi|325848773|ref|ZP_08170283.1| hypothetical protein HMPREF9246_1471 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1471 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 193 1 193 193 185 100.0 1e-45 MTLKEKEIEEIDKSIKNKEDEKAKAKENLDKINADIENLKKENKEVQNKIDALNSNKENK ENDKKSEENKLSQNEKKSQEISNENKEIEASVKENESKINALNTEKTNDQNNKAKLEGEK STLEQGLSDKKKKLEELEKNNKSQVSEEDKKKAQAQWNRGSIGFFEKMKSDKALKVFTEI PENKKIVLMLHFF >gi|325480382|gb|AEXN01000032.1| GENE 261 232344 - 232967 759 207 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325848757|ref|ZP_08170267.1| ## NR: gi|325848757|ref|ZP_08170267.1| hypothetical protein HMPREF9246_1472 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1472 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 196 13 208 219 193 100.0 5e-48 MAMSTAFVFSNANVSLADENLDSNIATKEDTTKSNYQEVKENYDKAEENYQKANASLKDA EKSYEIQKENQENLKNEYMQEKNNLDSSKKDLENEINQNILDQEGKVKKASEDLNNGEKN LDQAKKDLSKDKDNITSKQEAKKLADEKLKEEKEKNPNIEEIVKEDEKNLNEAKASKDKS QKAFDEKSKELDGKSNDLKDLEKKKKI >gi|325480382|gb|AEXN01000032.1| GENE 262 233160 - 234425 841 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 16 391 13 388 418 328 45 1e-88 MKFQYEKEYDSVFDELKDRGYFEAATDEEELAEKLKNEKLTFYCGFDATADSLTVGHLIQ IMVMMRMQNYGHRPIALLGGGTTMIGDPSGRSDMRMVMTKERIDHNADCFYKQFQRFLEF ENDGEDSGDKAIMVNNGDWLLNLPFVDFLRDVGSNFLVNEMLKKDAYKNRMEKGLTFFEF SYMLLQSYDFLELFRRHNCTLEIGGSDQWSNIIGGYDLIRKKEDEKVYGMTFKLLTTADG VKMGKSQKGAVWLDEKKTSAYELFQYMRNVDDRDVEKFLLMLTFLPTDECRRLGNGKDAK EINHAKEVLAYEITKLIHGEEKAKEALEASKALFSGAGDESAMPTTEIEKEELPMGILTL LTKLGLTKSNSQARDSVKGGGVSINDEKITDPRFEINEELFEDGKIIVKKGKKTFHKVTI K >gi|325480382|gb|AEXN01000032.1| GENE 263 234671 - 235087 414 138 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0260 NR:ns ## KEGG: HMPREF0868_0260 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 137 1 138 148 83 36.0 3e-15 MGFLFNDVNEFREIINEKFKNTDSYLFAIKHNSKAKRFLKLLASNLYNTVDSSRTFLLYF NEKGIYEKEVSNSTKGDFILMPWDEIEVFEIVEEYRKAFIKFPHSGKNISYEIDFDGKMG VDNRKNFENLKGKSWHRL >gi|325480382|gb|AEXN01000032.1| GENE 264 235097 - 235300 173 67 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0259 NR:ns ## KEGG: HMPREF0868_0259 # Name: not_defined # Def: Xre family toxin-antitoxin system antitoxin protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 2 67 3 68 71 93 75.0 3e-18 MEVEINNKIREFRKEKGLSQHKLAKMVGLKRRSIMAYENNTISPSLETAYKICKVLDKDI KEVFIFK >gi|325480382|gb|AEXN01000032.1| GENE 265 235749 - 236903 1692 384 aa, chain - ## HITS:1 COG:lin1675_2 KEGG:ns NR:ns ## COG: lin1675_2 COG1454 # Protein_GI_number: 16800743 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 6 379 6 410 411 313 44.0 4e-85 MAIKTFAIPRTIVHGVDSLEYLKNLEGKKAVLVTGGHSMKKFGFLDQAKKYLEEAGMEVM ILDGVEPDPSVKTCLEGGKKMEEFGPDWIIPIGGGSAMDAAKAMWIFYEHPGYSFEKLAA FDNPPLRTKAKMACIPSTSGTASEITAFSVITDTEKEIKYPLVHPDFVPDVAICDPVIAS KMPPRITAQTGMDVMTHAVEAFVSTSADDYTSPLAIRAIELVFENLKKAYDNGEDMDARE KMHDASTLAGMAFSNASLGIVHSMAHKIGGIFHLTHGEANAIMLPYIIDYNRKATDKYDK LEKILGIDDIAEEIRKLNEAVGLTANIKDGKNTVIEEDKFLEVLDKMSENAFKDACTLTN PRETSPEDIKKIYEAAYYGKKVEF >gi|325480382|gb|AEXN01000032.1| GENE 266 237318 - 240527 4025 1069 aa, chain + ## HITS:1 COG:BS_pyrAB KEGG:ns NR:ns ## COG: BS_pyrAB COG0458 # Protein_GI_number: 16078616 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Bacillus subtilis # 1 1051 1 1049 1071 1103 52.0 0 MSKNISVKKTLVIGSGPIVIGQAAEFDYSGTQACETLKSLGVETVLINSNPATIMTDPNL ADRTYIEAINFETVVKIIEKERPDSIIATMGGQTSLNMTLKLYEEGILDKYNIKIIGTDI EAIKKGEDRELFRKTMKEIGQPIVSSEIARSLDQGLKIAQKIGYPLVIRPAYTLGGSGGG FANNDEELKEVLSLGLSLSPVSECLIEKSIKGWLEIEFEVLRDNEGKKIVVCDMENVDPV GVHTGDSIVVAPCQSLEKESVNKLKQASLDIVEAIGVKGACNVQLAYNKENDEYAVIEIN PRVSRSSALASKAVGYPIARIATKIALGLNFSDIENVSTGKALGQYQPECNYVVVKIPKW PFDKFKNAKRKLGTKMMATGEVMAIGSTFKEALLKGIRSLEIGKYSLESEFSHNKSDDDL IQRMQKPDDERLFDLAEFIRRGHNIDEVHQITKIENYFLNLIKEIIDDEEKLKNTNFKDL DPAYLKKLKEDGFADYTIAKLLGVDISEISSLRKDNKIFPKYKKVDVSAFRKNGSYIYSS YLGNDQSEISNNKKIIVIGSGPIRIGQGIEFDYCSVHAIKALINMGIETITINNNPETVS TDFDTSDKLYFEPLSQEDVLDIIEKENPDGVILAFGGQTAIKLAKDLHEHKINIIGTGFD VIDRAEDREKFEALLEKLNIKRPKGYGVKSLEQGLKVAKDLGYPVLIRPSYVLGGQGMEI TYDEERLKQYLKAAFKRDKENPVLIDKYLIGREIEVDAISDGDNILIPGIMEHLERAGVH SGDSTSIYPSINISDQIKEKIYQETLKIAKELKVKGMINIQFIEYQDDIYIIEVNPRASR TVPYISKVSTVPIVDLATKVMLGEKLKDLGYGTGIYKEAPMTCVKVPVFSLNKLNRVEIS LGPEMKSTGEVLGIGKDLDEALFKGFEASGQPISQEHGKVLVSIKDSDKKEFLEIAKTME KMGYSFLATENTAKFLNENNIKAELVGKIGQDKNNIIDLIKTSKLDLIINTPTKGGDSQR DGFKIRSSAIEYGIETITSLDTIKARLRIEEKDFDRKNIEIYEISELSK >gi|325480382|gb|AEXN01000032.1| GENE 267 240568 - 241911 1548 447 aa, chain - ## HITS:1 COG:no KEGG:Csal_1709 NR:ns ## KEGG: Csal_1709 # Name: not_defined # Def: hypothetical protein # Organism: C.salexigens # Pathway: not_defined # 5 441 57 485 485 216 32.0 1e-54 MKNKNILTDMRLHFIILLVVIAAEAIGIIPFDFGIVKFKLLPMIYALIIGIIVARTLSSS SISERDMARAGEYVSISCLFLIAYMATAIGPNISTVIKAGPALILQEFGNLGTIFISIPV AVFVFKMDRTAIGSGFSISREEGLGIVANLYGLDSPEGRGVMGSYITGTLLGTIAFSIIS SIFINISWFSPESLAMAAGTGSASMMSGAIAPIIEAFPDKEQALMGYGATSQVLSAVDTV YVAFFLGIPIAEWLYKLCKGKEKYEAEKAALAPTRHIEKKDDKEVNEGFAKTLSKYLGVL CITAVISIAGLYVSSIRMGSDSTMADVLVGMLWLFGITVIGLILDLLLQKVHINLPTILY IAFLASFASIPGLSPVAEPFNEAMTHLDLLPLCTPILAYAGISSAKELDSFKKQGLKIVV ITICALLGTYIGSAVIANIVLKIMGTV >gi|325480382|gb|AEXN01000032.1| GENE 268 242541 - 242678 116 45 aa, chain - ## HITS:1 COG:no KEGG:LDBND_1783 NR:ns ## KEGG: LDBND_1783 # Name: not_defined # Def: glycerol-3-phosphate cytidylyltransferase # Organism: L.delbrueckii_bulgaricus_ND02 # Pathway: not_defined # 1 41 92 132 154 68 80.0 7e-11 MGDDWKGKFDFLEEEGVEVVYLPRTPEISTSQIKKDLYEKDISKK >gi|325480382|gb|AEXN01000032.1| GENE 269 242771 - 242950 199 59 aa, chain - ## HITS:1 COG:lin1076 KEGG:ns NR:ns ## COG: lin1076 COG0615 # Protein_GI_number: 16800145 # Func_class: M Cell wall/membrane/envelope biogenesis; I Lipid transport and metabolism # Function: Cytidylyltransferase # Organism: Listeria innocua # 1 41 1 41 127 77 90.0 5e-15 MKRVITYGTFDLLHYGHINLLERAKALGDYLIVAISTDEFNSKEKIKKPTLASSKEKNY >gi|325480382|gb|AEXN01000032.1| GENE 270 243184 - 244653 1358 489 aa, chain + ## HITS:1 COG:ECs2829 KEGG:ns NR:ns ## COG: ECs2829 COG1004 # Protein_GI_number: 15832083 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Escherichia coli O157:H7 # 85 489 2 385 388 484 61.0 1e-136 MKKLSVKKLADFVSTYRKSKNFSQRNLSDLTGINRTMISRIESCNYVPSIDQLQVLAEVL GFDIVDLFVEEGKKSFMKNIDKKYKIAVAGTGYVGLSIATLLAQNNQVTAVDIVKEKVDL INDRKSPIQDDYIEKYLSEKDLDLTATLDGEAAYRDADFVVIAAPTNYDSKKNFFDCSAV ESVIELVLKVNPSATMIIKSTIPVGYTKSVREKYNTKNIIFSPEFLRESKALYDNLYPSR IIVSCDDESRDKAKIFASLLQEGAIKENIDTLFMGFTEAEAVKLFANTYLALRVSYFNEL DTYAESKGLNTEEIINGVCLDPRIGSHYNNPSFGYGGYCLPKDTKQLLANFDKVPQNMIS AIVDANRTRKDFIADQVLNIAGYYSYNEDIQYRPEKEKECVIGVYRLTMKSNSDNFRQSS IQGVMKRIKAKGATVIIYEPTLKDGQTFFGSEVVNNLNKFKKMSQAIIANRYDACLDDVI DKVYTRDIF Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:06:50 2011 Seq name: gi|325480266|gb|AEXN01000033.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00007, whole genome shotgun sequence Length of sequence - 83443 bp Number of predicted genes - 121, with homology - 113 Number of transcription units - 17, operones - 13 average op.length - 9.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 92 - 208 63 ## - Prom 285 - 344 3.9 2 2 Op 1 . - CDS 359 - 1885 1320 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 3 2 Op 2 12/0.000 - CDS 1885 - 3657 2397 ## COG0469 Pyruvate kinase 4 2 Op 3 3/0.000 - CDS 3677 - 4636 1429 ## COG0205 6-phosphofructokinase 5 2 Op 4 . - CDS 4647 - 8096 3336 ## COG0587 DNA polymerase III, alpha subunit 6 2 Op 5 . - CDS 8096 - 9013 958 ## COG1481 Uncharacterized protein conserved in bacteria 7 2 Op 6 . - CDS 9025 - 9747 791 ## COG2365 Protein tyrosine/serine phosphatase 8 2 Op 7 1/0.500 - CDS 9735 - 10589 980 ## COG1660 Predicted P-loop-containing kinase 9 2 Op 8 . - CDS 10589 - 11491 1114 ## COG0812 UDP-N-acetylmuramate dehydrogenase - Prom 11556 - 11615 6.8 + Prom 11562 - 11621 12.5 10 3 Tu 1 . + CDS 11650 - 11838 250 ## PROTEIN SUPPORTED gi|227500117|ref|ZP_03930188.1| possible ribosomal protein L28 + Term 11875 - 11927 10.3 - Term 11872 - 11906 3.0 11 4 Op 1 10/0.000 - CDS 11922 - 12584 898 ## COG0036 Pentose-5-phosphate-3-epimerase 12 4 Op 2 7/0.000 - CDS 12578 - 13441 804 ## COG1162 Predicted GTPases 13 4 Op 3 4/0.000 - CDS 13438 - 14421 1098 ## COG2815 Uncharacterized protein conserved in bacteria 14 4 Op 4 17/0.000 - CDS 14496 - 15452 1104 ## COG0515 Serine/threonine protein kinase 15 4 Op 5 5/0.000 - CDS 15460 - 16188 729 ## COG0631 Serine/threonine protein phosphatase 16 4 Op 6 1/0.500 - CDS 16191 - 16862 632 ## COG0820 Predicted Fe-S-cluster redox enzyme 17 4 Op 7 4/0.000 - CDS 16837 - 17217 279 ## COG0820 Predicted Fe-S-cluster redox enzyme 18 4 Op 8 20/0.000 - CDS 17220 - 18500 1274 ## COG0144 tRNA and rRNA cytosine-C5-methylases 19 4 Op 9 26/0.000 - CDS 18502 - 19416 824 ## COG0223 Methionyl-tRNA formyltransferase 20 4 Op 10 . - CDS 19435 - 19896 761 ## COG0242 N-formylmethionyl-tRNA deformylase 21 4 Op 11 1/0.500 - CDS 19907 - 21934 1938 ## COG1196 Chromosome segregation ATPases - Prom 21966 - 22025 4.3 22 5 Op 1 . - CDS 22045 - 23439 1302 ## COG1196 Chromosome segregation ATPases 23 5 Op 2 3/0.000 - CDS 23423 - 24499 1098 ## COG1243 Histone acetyltransferase 24 5 Op 3 . - CDS 24492 - 25208 659 ## COG0571 dsRNA-specific ribonuclease 25 5 Op 4 . - CDS 25208 - 25432 438 ## gi|212695677|ref|ZP_03303805.1| hypothetical protein ANHYDRO_00194 26 5 Op 5 14/0.000 - CDS 25429 - 26403 1163 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 27 5 Op 6 . - CDS 26452 - 26631 266 ## PROTEIN SUPPORTED gi|228003612|ref|ZP_04050600.1| LSU ribosomal protein L32P 28 5 Op 7 . - CDS 26701 - 27888 1935 ## COG0282 Acetate kinase 29 5 Op 8 . - CDS 27900 - 28808 855 ## gi|325849120|ref|ZP_08170612.1| hypothetical protein HMPREF9246_0240 30 5 Op 9 . - CDS 28805 - 29275 457 ## Apre_0653 hypothetical protein 31 5 Op 10 . - CDS 29272 - 29583 288 ## gi|325849065|ref|ZP_08170557.1| prepilin-type cleavage/methylation N-terminal domain protein 32 5 Op 11 . - CDS 29552 - 29983 332 ## Apre_0651 methylation site containing protein 33 5 Op 12 . - CDS 29991 - 30686 184 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 34 5 Op 13 . - CDS 30683 - 31051 470 ## Mahau_1123 hypothetical protein 35 5 Op 14 . - CDS 31062 - 32105 848 ## COG1459 Type II secretory pathway, component PulF 36 5 Op 15 33/0.000 - CDS 32154 - 32711 852 ## COG0233 Ribosome recycling factor 37 5 Op 16 . - CDS 32701 - 33423 1031 ## COG0528 Uridylate kinase - Prom 33530 - 33589 9.3 38 6 Op 1 . - CDS 33667 - 33828 74 ## - TRNA 33762 - 33842 39.0 # Sup TTA 0 0 39 6 Op 2 . - CDS 33792 - 33878 76 ## - Prom 33909 - 33968 5.8 40 7 Op 1 . - CDS 34456 - 34755 393 ## gi|325849054|ref|ZP_08170546.1| hypothetical protein HMPREF9246_0251 41 7 Op 2 . - CDS 34752 - 35429 522 ## ELI_3213 hypothetical protein 42 7 Op 3 . - CDS 35505 - 35639 73 ## gi|325849118|ref|ZP_08170610.1| hypothetical protein HMPREF9246_0253 - Prom 35709 - 35768 8.6 + Prom 35552 - 35611 3.8 43 8 Tu 1 . + CDS 35735 - 35947 61 ## + Term 36065 - 36108 1.3 - Term 36053 - 36094 -0.8 44 9 Op 1 . - CDS 36102 - 37949 2115 ## COG2217 Cation transport ATPase 45 9 Op 2 . - CDS 37953 - 38177 315 ## Apre_1409 heavy metal transport/detoxification protein 46 9 Op 3 . - CDS 38187 - 38480 230 ## COG0640 Predicted transcriptional regulators - Prom 38528 - 38587 9.1 - Term 38506 - 38547 2.2 47 10 Op 1 . - CDS 38669 - 38890 220 ## gi|325849023|ref|ZP_08170515.1| hypothetical protein HMPREF9246_0258 48 10 Op 2 . - CDS 38911 - 39114 222 ## - Term 39920 - 39974 3.8 49 11 Op 1 . - CDS 39994 - 40374 504 ## gi|325849073|ref|ZP_08170565.1| conserved domain protein - Prom 40479 - 40538 7.0 50 11 Op 2 . - CDS 40540 - 40971 560 ## gi|325849036|ref|ZP_08170528.1| hypothetical protein HMPREF9246_0260 - Prom 41053 - 41112 11.2 - Term 41255 - 41291 5.5 51 12 Op 1 . - CDS 41346 - 41717 443 ## gi|325849087|ref|ZP_08170579.1| hypothetical protein HMPREF9246_0261 - Term 41735 - 41767 2.0 52 12 Op 2 . - CDS 41777 - 42169 367 ## Tthe_0861 protein of unknown function UPF0150 53 12 Op 3 . - CDS 42205 - 42396 169 ## gi|325849052|ref|ZP_08170544.1| toxin-antitoxin system, toxin component, HicA family 54 12 Op 4 . - CDS 42461 - 43408 712 ## Amet_2548 sporulation domain-containing protein - Term 43419 - 43451 3.3 55 12 Op 5 . - CDS 43453 - 43818 242 ## Apre_0863 hypothetical protein - Term 43846 - 43873 -0.8 56 12 Op 6 . - CDS 43878 - 44519 698 ## gi|325849136|ref|ZP_08170628.1| carbohydrate binding domain protein - Term 44534 - 44562 -0.1 57 12 Op 7 . - CDS 44567 - 45049 444 ## gi|325849030|ref|ZP_08170522.1| hypothetical protein HMPREF9246_0267 58 12 Op 8 . - CDS 45043 - 45549 471 ## gi|325849135|ref|ZP_08170627.1| conserved domain protein 59 12 Op 9 . - CDS 45546 - 46775 1607 ## M5005_Spy_1000 phage protein 60 12 Op 10 . - CDS 46779 - 46946 265 ## 61 12 Op 11 . - CDS 46951 - 49485 2624 ## ELI_3101 KID repeat family protein 62 12 Op 12 . - CDS 49479 - 50150 424 ## gi|325849128|ref|ZP_08170620.1| hypothetical protein HMPREF9246_0272 63 12 Op 13 . - CDS 50147 - 54796 5839 ## COG5283 Phage-related tail protein 64 12 Op 14 . - CDS 54816 - 55424 484 ## Clole_0828 GP15 family protein 65 12 Op 15 . - CDS 55421 - 55819 611 ## gi|325849051|ref|ZP_08170543.1| hypothetical protein HMPREF9246_0275 - Term 55847 - 55875 -0.3 66 12 Op 16 . - CDS 55892 - 56461 789 ## Clole_0826 hypothetical protein 67 12 Op 17 . - CDS 56454 - 56786 274 ## Clole_0825 hypothetical protein 68 12 Op 18 . - CDS 56882 - 57232 367 ## EUBREC_1294 hypothetical protein 69 12 Op 19 . - CDS 57229 - 57585 365 ## gi|325849088|ref|ZP_08170580.1| hypothetical protein HMPREF9246_0279 70 12 Op 20 . - CDS 57575 - 57976 492 ## gi|325849027|ref|ZP_08170519.1| hypothetical protein HMPREF9246_0280 71 12 Op 21 . - CDS 57995 - 59047 1548 ## Sterm_1431 hypothetical protein 72 12 Op 22 . - CDS 59058 - 59624 775 ## SPH_0103 phage minor structural protein GP20 73 12 Op 23 . - CDS 59621 - 59776 106 ## - Prom 59798 - 59857 3.2 - TRNA 59707 - 59790 76.6 # Tyr GTA 0 0 - Term 59788 - 59818 -0.6 74 13 Op 1 . - CDS 59862 - 60182 252 ## MGAS10270_Spy0567 phage protein 75 13 Op 2 . - CDS 60154 - 60795 466 ## MGAS10270_Spy0567 phage protein - Term 60814 - 60842 -1.0 76 13 Op 3 . - CDS 60843 - 61103 178 ## gi|325849061|ref|ZP_08170553.1| conserved domain protein 77 13 Op 4 . - CDS 61105 - 62244 1099 ## ELI_3213 hypothetical protein 78 13 Op 5 . - CDS 62244 - 63599 1282 ## ELI_3214 phage minor capsid protein 79 13 Op 6 . - CDS 63608 - 64927 751 ## EUBREC_1284 hypothetical protein 80 13 Op 7 . - CDS 64914 - 65312 572 ## SPJ_1871 phage terminase small subunit - Prom 65501 - 65560 9.2 - Term 65587 - 65628 0.6 81 14 Op 1 . - CDS 65698 - 66168 307 ## gi|325849082|ref|ZP_08170574.1| hypothetical protein HMPREF9246_0291 82 14 Op 2 . - CDS 66178 - 66522 266 ## bpr_II385 hypothetical protein 83 14 Op 3 . - CDS 66492 - 66707 316 ## gi|325849074|ref|ZP_08170566.1| hypothetical protein HMPREF9246_0293 84 14 Op 4 . - CDS 66700 - 66993 417 ## gi|325849072|ref|ZP_08170564.1| conserved domain protein 85 14 Op 5 . - CDS 67009 - 67305 323 ## Apre_0827 hypothetical protein 86 14 Op 6 . - CDS 67321 - 67683 412 ## Apre_0826 hypothetical protein 87 14 Op 7 . - CDS 67699 - 68040 577 ## smi_0430 prophage Pi3 protein 88 14 Op 8 . - CDS 68103 - 68414 499 ## gi|325849114|ref|ZP_08170606.1| hypothetical protein HMPREF9246_0297 89 14 Op 9 . - CDS 68444 - 68629 146 ## gi|325849050|ref|ZP_08170542.1| hypothetical protein HMPREF9246_0298 90 14 Op 10 . - CDS 68626 - 68994 312 ## gi|325849121|ref|ZP_08170613.1| hypothetical protein HMPREF9246_0299 91 14 Op 11 . - CDS 69006 - 69197 286 ## gi|325849070|ref|ZP_08170562.1| hypothetical protein HMPREF9246_0300 92 14 Op 12 . - CDS 69200 - 69562 378 ## gi|325849100|ref|ZP_08170592.1| hypothetical protein HMPREF9246_0301 93 14 Op 13 . - CDS 69574 - 69765 258 ## gi|325849093|ref|ZP_08170585.1| conserved domain protein 94 14 Op 14 . - CDS 69762 - 70124 319 ## gi|325849095|ref|ZP_08170587.1| conserved domain protein 95 14 Op 15 . - CDS 70121 - 70324 296 ## Apre_0819 hypothetical protein 96 14 Op 16 . - CDS 70321 - 70539 325 ## gi|325849111|ref|ZP_08170603.1| hypothetical protein HMPREF9246_0305 97 14 Op 17 . - CDS 70566 - 70838 132 ## gi|325849103|ref|ZP_08170595.1| hypothetical protein HMPREF9246_0306 98 14 Op 18 . - CDS 70835 - 71023 144 ## gi|325849039|ref|ZP_08170531.1| conserved domain protein 99 14 Op 19 . - CDS 71020 - 71217 241 ## gi|325849085|ref|ZP_08170577.1| hypothetical protein HMPREF9246_0308 100 14 Op 20 . - CDS 71214 - 71615 523 ## Apre_0820 hypothetical protein 101 14 Op 21 . - CDS 71625 - 72107 442 ## COG0629 Single-stranded DNA-binding protein 102 14 Op 22 . - CDS 72104 - 72553 410 ## gi|325849076|ref|ZP_08170568.1| hypothetical protein HMPREF9246_0311 103 14 Op 23 . - CDS 72543 - 72743 202 ## gi|325849064|ref|ZP_08170556.1| conserved domain protein 104 14 Op 24 . - CDS 72730 - 72912 305 ## gi|325849047|ref|ZP_08170539.1| hypothetical protein HMPREF9246_0313 105 14 Op 25 . - CDS 72909 - 73106 199 ## gi|325849042|ref|ZP_08170534.1| hypothetical protein HMPREF9246_0314 106 14 Op 26 . - CDS 73111 - 74088 1313 ## Apre_0808 hypothetical protein 107 14 Op 27 3/0.000 - CDS 74117 - 75028 941 ## COG3723 Recombinational DNA repair protein (RecE pathway) 108 14 Op 28 . - CDS 75021 - 75959 863 ## COG5377 Phage-related protein, predicted endonuclease 109 14 Op 29 . - CDS 75965 - 76150 311 ## gi|325849112|ref|ZP_08170604.1| hypothetical protein HMPREF9246_0318 110 14 Op 30 . - CDS 76153 - 76335 205 ## gi|325849025|ref|ZP_08170517.1| hypothetical protein HMPREF9246_0319 111 14 Op 31 . - CDS 76405 - 76647 373 ## gi|325849075|ref|ZP_08170567.1| hypothetical protein HMPREF9246_0320 112 14 Op 32 . - CDS 76657 - 76857 273 ## gi|325849062|ref|ZP_08170554.1| conserved domain protein 113 14 Op 33 . - CDS 76867 - 77649 661 ## COG3617 Prophage antirepressor 114 14 Op 34 . - CDS 77714 - 77929 321 ## Apre_0798 transcriptional regulator, XRE family - Prom 78173 - 78232 7.2 + Prom 77936 - 77995 12.1 115 15 Op 1 . + CDS 78109 - 78717 679 ## COG1396 Predicted transcriptional regulators 116 15 Op 2 . + CDS 78730 - 80139 1360 ## LSA1108 putative chromosome segregation ATPase 117 15 Op 3 . + CDS 80190 - 80795 676 ## gi|325849119|ref|ZP_08170611.1| putative lipoprotein + Term 80798 - 80834 2.5 118 16 Tu 1 . + CDS 80846 - 81973 1025 ## Lebu_0394 integrase family protein - TRNA 82080 - 82165 68.8 # Leu TAG 0 0 - TRNA 82169 - 82245 70.6 # His GTG 0 0 + Prom 82362 - 82421 15.8 119 17 Op 1 . + CDS 82476 - 82580 119 ## 120 17 Op 2 . + CDS 82577 - 83170 499 ## COG2137 Uncharacterized protein conserved in bacteria 121 17 Op 3 . + CDS 83170 - 83443 173 ## COG2827 Predicted endonuclease containing a URI domain Predicted protein(s) >gi|325480266|gb|AEXN01000033.1| GENE 1 92 - 208 63 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDKSNKKFWDKFAKLYAPCMKKIKEYMIKFANTFVLI >gi|325480266|gb|AEXN01000033.1| GENE 2 359 - 1885 1320 508 aa, chain - ## HITS:1 COG:SP1029 KEGG:ns NR:ns ## COG: SP1029 COG2265 # Protein_GI_number: 15900900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 507 7 543 543 329 40.0 7e-90 MQIKDIKIVDILQDGRGVGKADSKVYFIENASFGEICDIEITNEKKNFIEAKKIKTKKQS CHYKQPPCPYYYECGGCSIMDINYKSQIKLKENLIKNALLKSAKIQLEDIEVLQSKEFYY RNKIRLQITKDGKLAYNKKYSNDLIEIKDCLLANDLIRENLGKIENISKEISKNYPNSLE EITIRANDEEILLNIKIKDEKIIPYIKKQYKNSSFNINLINKKEKLNISGKDYLIYNLLD KKFKISMNDFYQVNDYMTEKLYKTAKNFLGEDQKVLDLFCGSATSSIAINDDHVVGIEIN KNAIKDAKENAKINGLKDYKFIAKNANYIDHKFIKKEKIDAIVVDPPRAGLDKEIIKTIA KTKIKKIVYISCNPQTLARDINRFQNKGYKLEKIKGCDMFSQTMHVETVALLSKLDIDKH ISVEIELDEMDLTSVESKATYTQIKEYVWNKFQLKVSTLYIAQIKRKYGIELREHYNKSK KEKQNIPQCTPEKEEAITDALRHFKMIE >gi|325480266|gb|AEXN01000033.1| GENE 3 1885 - 3657 2397 590 aa, chain - ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 6 479 1 473 473 493 55.0 1e-139 MKPDILKKTKIVCTIGPASESLEVLEQLVKNGMNVARLNFSHGSHEEHLEKIKTIKKLRR KLNVPLGLMLDTKGPEIRIGRFEEKEYFLKPDDIFTITTRDIIGNKDIVSVSYSGLPNDV EKGSIISVDDGLIQLEVMEIKDGTEIVCRVQNNGVISNNKGVNLPGRVTNLPAITPKDVD DIKFGIENGIDMIAASFIRKKEDIYDIRKVLEDHGGEDILILSKIESQEGVDNIDEIIEA SDGIMVARGDLGVEIRTELIPLVQKEVIRKCNKAAKPVITATQMLDSMQRNPRPTRAETT DVANAIIDGTDCVMLSGETAAGKYPVEAVKTMRDICITTELSDDFEENIYQAEIDRKITT TNAISKSTCTIASQLNAKAIITCTASGNTAKAVSKFRPKTNIIACTIDEKVARRLSVSWG VYPVIVEKAHETDELIERAIVGALKENYVQEGDITVLTAGIPLGVSGTSNLIKVHVIGDI IANGTGVGNKSVSAKVVVGSTKEELEGKFEDGDIIVAKYTDKDINEFMERSSGVIAENGG LTSHTAVVSIHFGIPAILGVKDATSSLKDGDVVTIDPLGGIIYKGEAKVL >gi|325480266|gb|AEXN01000033.1| GENE 4 3677 - 4636 1429 319 aa, chain - ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 1 319 1 319 319 357 58.0 1e-98 MKTIGILTSGGDAPGMNSAIRAAVRTALNNGMRIKGIRNGYDGLMKGDIYEMNVSSVADI IHKGGTILGTARSTEFKHAEGQKRGAQILRDYGIEGLIVIGGDGSYKGAKALSDLGIKAI GIPGTIDNDMGYTDFTIGFFTAIETVTDAIGKLRDTSSSHGRAVVIEVMGRNCGDLALFS GLAGGAESIIVPEHKFSIDEIVEKVNHGRKRGKLHHLIVLAEGVGNPYTVAKEVEERSGV ETKVTVLGHVQRGGSPSATDRLLGSIMGAKAVELLKEEKTNIALGYTGGKITQVSLDEAV SIKGDFNEGLYALANKLSK >gi|325480266|gb|AEXN01000033.1| GENE 5 4647 - 8096 3336 1149 aa, chain - ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 4 1148 10 1166 1167 1036 49.0 0 MTNNFTHLHLHTEYSLLDGFTKIDKLMEKLKEYKMNSCAITDHGNMYGVIEFYKKCQDNG IKPIIGCEVYVSDNDHKIKNPQNKRYYHLILLAKNNRGYQNLIKIVSKAYTEGFYYKPRI DFEVLEEYKDDIIALSACLNGEINQRILENDIEKAYQTAQKYLDLFGRENFYLEIQNHGL KEQKIVNQNLLKIHEDLKIEMVCTNDVHYVEKNDAFYQDVLSCIQTGSLLEDEKRMKMPC DEFYLKDQQMMKEIFKDFPRAYENSQKIADMCNVKLEFHNPHLPYFTKVPENMTNLDYLK YLVNKGLAKKYGKVDEKIQKRAEKEISVINNMGYVDYFLIVWDFVRYAKDNKIAVGPGRG SAAGSIISYALDITQIDPIKYNLLFERFLNPERVSMPDIDIDFCYENRDRVVDYVYDLYG KDHVSQIVTFGRMKARNAIRDVGRVMDISFKKVDKIAKLIPQAIGMTIDKALENTEKLAY EYENDVETKRMIDTARNIENLPRHTSIHAAGVVISKEILTDIVPLALSNDQIVTQFNMTE IEELGLLKMDFLGLRNLTVIQDTIKDVKKYKNIDINLDNIDENDPKVLDQFRKAETIGIF QFESAGMRNFLKNLKPTRFDDLVAANSLFRPGPMDQIPNYIKNKMYPQNISYIDQSLKPI LEVTYGIIVYQEQVMQIVQQLAGFSLGEADNLRRAMSKKKMSVMEANREIFVHGKKDEKG NYEVLGCVNNGISEQNANKIYDEMISFAKYAFNKSHSAAYSLVAIQTAYLKCYFKEEYMA NLLTSIMGDSSKVYLYISEAKRLGIEIVPPDINKSERRFIAEKNKIIFGMSAIKNVGDNL IDLIVKIRDEKIYKTFKDFLERIESNDPTALNKKALESLIKSGAFDSLGYKRSELIAVHE TALQSIHDNEKVNLKGQMNLLDFDQKDQNEEDDIKFPPVNEYKNKQKLSLEKEVLGFYIS DHPLNSLGDRVKKYTNFSTEILSELRPIDLDKYDNKEVVMAGVITNKSETMTKKNTLMAF STLEDMYGSIEMIIFPNIYKDFRNVVENDTLVMVKGNLQSSDDELKLIVSNIKEIDENSF KNLYIKMDYIRYNKIRKDLLDNHGTTPVIIYFTDKKKTVKLDESLWIDQNSDIINYLKLK IGKDNVKLN >gi|325480266|gb|AEXN01000033.1| GENE 6 8096 - 9013 958 305 aa, chain - ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 302 1 310 317 148 32.0 2e-35 MSFSKRCKKEILKKEPEYKEIDMELLAYFYFQGSIRIVKNSYQILFKASENIEARYIYKI IKEKYKYSPAMEIQNKRKFSKDRSFIVLVEDSLVSDKILKLADTYNLYEMEKFYENLKTR EQKKIILKLAFLLKGSINDPYRGYNLEINLQQKEEALLIGKIMEDFSINPKLNLRNDLYC VYIKDSDKISDFLAIIGANKSLFDLENVRAMKSIRNDINRQTNFDKANIDRTVKAAFRQI DAINKLKDKNILENLSEDLQEISELRLTYPYISLEELGKMMTPALSKAKVNYRLQKLIKL AESED >gi|325480266|gb|AEXN01000033.1| GENE 7 9025 - 9747 791 240 aa, chain - ## HITS:1 COG:lin2049 KEGG:ns NR:ns ## COG: lin2049 COG2365 # Protein_GI_number: 16801115 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 8 240 76 326 326 75 27.0 8e-14 MEKIKYLKILPFENIKNARSLGGYPTYDGNITSWDSFIRSANLDSLTEKDMDLLKDLKVS TIIDLRREEETKNKGEKIEIIKNNFTYKQISLMPWPMKQEDIQNIIERKISIGNSYISLI DNFPAIKEILEIMASSDGRVLYHCQEGKDRTGIISMILLLIAGTSRENIMADYEISSANL GYIDRFEADEAESIFRITSPYNMKEAMDYLEKKYKNIETYLKKVGIDEKTFKKLKEKMIE >gi|325480266|gb|AEXN01000033.1| GENE 8 9735 - 10589 980 284 aa, chain - ## HITS:1 COG:L188550 KEGG:ns NR:ns ## COG: L188550 COG1660 # Protein_GI_number: 15672943 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Lactococcus lactis # 1 284 5 290 295 219 41.0 4e-57 MKVKIITGLSGSGKTTALRIFEDLDYYAMDNVPSSLIESFIKLNMSQDNPIDKLACVVDF RSMEVDKNLVKNLENLKKINEDTKIIYLTSQDEIIMKRYNELRRPHPLGSFGDVEDGLKK EKKELKSVEKLADLIIDTSNYNNKDLRKVILDVSEKKENFIINLFSFGYKNGLSLDVDVV FDLRFLPNPFYIKELKHLNGSDKKLQEYLDKFEIANDFKNTVYENLTKLIPYFVKEGKNS ISIGFGCTGGQHRSVYMCEKIYELLKDSNYIVVKKHRDREKWKK >gi|325480266|gb|AEXN01000033.1| GENE 9 10589 - 11491 1114 300 aa, chain - ## HITS:1 COG:SP1390 KEGG:ns NR:ns ## COG: SP1390 COG0812 # Protein_GI_number: 15901244 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 6 299 10 299 316 244 44.0 2e-64 MDYKSLYEGKDFGIIRFNEKLKNYTNFGIGGCADVLVEVEEEYQLVDLIKFNKENNIKTT IIGNGTNILVTDKGIRGCVIIISKNYNRISVDGNLLKVSAGALLSEASKFSFKNFLTGME EVSGIPGTVGGAVAMNAGAYGVEMKDIIKTVKLISRDGQIIELSNQDMDFSYRHSKVFDD DLIVSEAIFELKEGNQEEINEKYNDFTNRRVTKQPLEKKSAGSTFKRPVGSYASKLIDEC GLRGYKKGDCQVSEKHCGFLINNGDATYNEMIDFIEEVASIVFEKTGFKLEREVKVIGEK >gi|325480266|gb|AEXN01000033.1| GENE 10 11650 - 11838 250 62 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227500117|ref|ZP_03930188.1| possible ribosomal protein L28 [Anaerococcus tetradius ATCC 35098] # 1 62 1 62 62 100 70 2e-20 MARECDICGKGTKFGNKVTFSHRRLNRNFKPNVHKLRAKINGSVKTINVCTKCIKSGKVE KA >gi|325480266|gb|AEXN01000033.1| GENE 11 11922 - 12584 898 220 aa, chain - ## HITS:1 COG:CAC1730 KEGG:ns NR:ns ## COG: CAC1730 COG0036 # Protein_GI_number: 15895007 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Clostridium acetobutylicum # 1 202 1 202 216 191 46.0 1e-48 MVEISPSVLSANFSNLQNDLDQLKKTKVKYLHLDIMDGKFVPNISFGFPIIKSIREDNDF IFDTHLMIDEPIRYIDQFKKSGADLITVHYEACSNLDETIEKIKNSGLKVGLSFKPKTDI EKIIPYLEKIDLCLVMSVEPGFGGQSFIEDSIGKIQKLRSYIDDNNLSCLIEVDGGIKDH NLKKVIDAGVDVVVSGSDIFSHKENSIIDQVNKYYEIINE >gi|325480266|gb|AEXN01000033.1| GENE 12 12578 - 13441 804 287 aa, chain - ## HITS:1 COG:BH2503 KEGG:ns NR:ns ## COG: BH2503 COG1162 # Protein_GI_number: 15615066 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus halodurans # 3 284 4 293 294 203 39.0 3e-52 MIGKIIKSQKEIYYVLSDEKNYMCKARGVFRNKNIKPLVGDNVEFDVTEDSKGYITKILD RKNQIKRPNIANIDQILYFITIKNPSLNLFNIDKYLAMCEYINVDVIIIVSKKDLADKKD LEFIKMYEKIGYKLIFIDNYKDFPESEILEILRGKTSAVSGSSGVGKSTFLSNLVEKDIE IGSISEKSKRGKNTTRHVEIFNLEKNTNIFDTPGFDSFDIDFIDDEKDLKYCFREFDNNS CKFKDCNHINEPKCKVKNDLSKNIIKKTRYENYLTLFEEIKKRRQTW >gi|325480266|gb|AEXN01000033.1| GENE 13 13438 - 14421 1098 327 aa, chain - ## HITS:1 COG:Cgl0041_2 KEGG:ns NR:ns ## COG: Cgl0041_2 COG2815 # Protein_GI_number: 19551291 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 12 231 13 228 308 90 33.0 3e-18 MWPFILLLIAVLAGGFYYVKSSNSNMVQVPTVLNLSEEEAVKILEEKNLKANISRYAQSN NYEAGKVMEQDPTPKTKVRKNSTVNLVVSQGREVKVPDLSGLTLEQAEEKLKELDLELGK TSTDFSESVKKDKIIDQDPRKNEKVQAGSEIDVTVSLGKEEDDVKNVKVPNFVGNYEEDA ISLANDNGLTVGNITYKYSDKYEKGVVISQSIAAKTQVAEHSSIDFVVSRGKNPNDSSDE DTDDGNKSQQVNVKFTISVPTDKDSFNVKVYKLGDNNKNSDLLYNQNHTKDELDSNGNLN LDFKSAVGTKVNILIDDKSQGVYEVNR >gi|325480266|gb|AEXN01000033.1| GENE 14 14496 - 15452 1104 318 aa, chain - ## HITS:1 COG:CAC1728_1 KEGG:ns NR:ns ## COG: CAC1728_1 COG0515 # Protein_GI_number: 15895005 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Clostridium acetobutylicum # 1 294 1 289 373 253 49.0 4e-67 MDNIILGNRYQLQDLIGVGGMAKVYKATDRLLQRDVAIKILKDQYAEDDEFVKKFSNEAL SAARLTHVNIVSVYDIGEDMIEGKKIHYIVMEYVDGETLKDLIDREKIISNHDIVDYSIQ IAQALNQAHSSNIIHRDIKPQNILMDKYGLLKVTDFGIARVSTNATITYTSSILGTVHYI SPEQAKGKFVDEKSDLYSLGVVMYEMATGKVPFDADNSVGIAVMHIQDEPESPIKLNENL SPRLNDIIMKLLEKDPQKRFKNANELIRALEDNSYDIGVIKKEDTAKIEKPKEITETTFI PVVENKKKKDEEKEKKKN >gi|325480266|gb|AEXN01000033.1| GENE 15 15460 - 16188 729 242 aa, chain - ## HITS:1 COG:BS_yloO KEGG:ns NR:ns ## COG: BS_yloO COG0631 # Protein_GI_number: 16078639 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Bacillus subtilis # 7 240 7 241 254 150 35.0 2e-36 MKFSTISNIGKVRSENQDYYGNLELDKYCFFIVADGMGGYNGGEIASKLAAKYYIDFIKD ANIENFPSIIDLQEEALRDANNKIYSLSKSYEQYSNMGTTAVCVCIDYEKKSYHISHIGD SRAYIYSDKKLQRITRDHSLVNDLIDSGSITEDEAQNFANKSTITRAVGVASKIKPESRS LDMKDSDILLMVTDGLTNEVSDVEIESIIANNSTADKISSSLVDLAIRNGGHDNITVTTI LI >gi|325480266|gb|AEXN01000033.1| GENE 16 16191 - 16862 632 223 aa, chain - ## HITS:1 COG:SA1061 KEGG:ns NR:ns ## COG: SA1061 COG0820 # Protein_GI_number: 15926801 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Staphylococcus aureus N315 # 7 218 140 355 364 189 45.0 3e-48 MLLQKNGLERSLSAAEIIEEIYLLERENSDISNIVVMGIGEPLDNFSNIEKFIKIITDQK GRNLSHRSITVSTVGLVDKIYDLANLGYDINLAVSLHYAFDEKRMAYMPSGKKYKIKDII KACDYYLEKTKRRVSYEYVVIDGVNNLREDIDQLENLFKGKNIHINLIPLNPIEEFKYSK TKNNVMDQFQQKLTKKGLNATIRRSMGSDIDASCGQLRNNYAR >gi|325480266|gb|AEXN01000033.1| GENE 17 16837 - 17217 279 126 aa, chain - ## HITS:1 COG:BH2506 KEGG:ns NR:ns ## COG: BH2506 COG0820 # Protein_GI_number: 15615069 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Bacillus halodurans # 11 122 25 135 362 103 45.0 6e-23 MKQTINDKTIEELEKIFLDLGFKKFRAKQVFRQIHVNKINDFSKMTDLSKKMREDLDKYF YFPKIKVVKEFKSNLDKTKKYLFELDDKNIIEAVFMEYNNRNTICISSQVGCRMGCKFCA STKKWP >gi|325480266|gb|AEXN01000033.1| GENE 18 17220 - 18500 1274 426 aa, chain - ## HITS:1 COG:CAC1725 KEGG:ns NR:ns ## COG: CAC1725 COG0144 # Protein_GI_number: 15895002 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Clostridium acetobutylicum # 5 425 6 439 441 233 36.0 6e-61 MEDFKLILDGLYRICYKNEKSTDIINNIAREVSDISYITKNIYGVLENKLYLEYIIGKLS KIKIKKLDKKVLLILEIGIYNIHFLDRKNYAIVNELVNLTKKVSYKSKSFVNAILRSYIR DEENLSKIKAKNKEQFQSIKYSIPLWIINNLNESYGYDYTEKFLNSLNKERKLSIRVNKN KIEKNKLKTLLEEKGYEVEESKISSRSLIVKNPRSLADTKEFKEGLFTIQSEASIKVCEV LNPEKNSQILDLCAAPGTKTSFLAELCENSSRIVANDISFNKLSKINENIKRLGLKNIEI TNFDASIVKDEYKEKFDYVLCDLPCSGLGVMDRKPEIRYNRTMEDVINLSKLQKNILDRA FLYLKKGGIMVFSTCTIGNIENKDNFTYLSKKKSLKNIKINGEEYLEYNTFEDETDGFFL TKFEKI >gi|325480266|gb|AEXN01000033.1| GENE 19 18502 - 19416 824 304 aa, chain - ## HITS:1 COG:RC0279 KEGG:ns NR:ns ## COG: RC0279 COG0223 # Protein_GI_number: 15892202 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Rickettsia conorii # 1 296 6 295 303 160 30.0 3e-39 MGSPKFSLETLDILNKNENINVSLVVSGKDKKRNRNKFKPTVIKQYALDNNLEVLTPDSV NTDEFISILKEKEIDFIVVVAFGQLIKENLLKEFENKIINLHPSSLPKYRGPSPVQFTLL NGDKKTHASAMLIEKGMDSGDILYQKEVDINDEDDFTSLSEKLSKIGSQTILYSLLNYND LIEKSIKQDDENATFTKKISKDMGKIDFSNDKEDIINKIRAFVEFPKAYFSYKRENVKIL KASPVQIENPKISFVYKANKEDKIIIGCKNGGIKIEKIQFPGKKAMDTKSFLLGNDFEEG IYLE >gi|325480266|gb|AEXN01000033.1| GENE 20 19435 - 19896 761 153 aa, chain - ## HITS:1 COG:CAC1722 KEGG:ns NR:ns ## COG: CAC1722 COG0242 # Protein_GI_number: 15894999 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Clostridium acetobutylicum # 1 148 1 146 150 157 57.0 6e-39 MAIRNIRQVGDPILRKTSKEVKEVNDRIKILLDDMAETMYKADGVGLAAPQVGLLKRVIV VDIRDEDGLIKLVNPEIIEKDGEQVGVEGCLSVPNFNANVKRPAHVIVKYLDENGEEKKI EAEGLKAVALCHEIDHLNGVLFIDNYEEEVKFD >gi|325480266|gb|AEXN01000033.1| GENE 21 19907 - 21934 1938 675 aa, chain - ## HITS:1 COG:SA1077 KEGG:ns NR:ns ## COG: SA1077 COG1196 # Protein_GI_number: 15926817 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Staphylococcus aureus N315 # 8 671 503 1177 1188 263 29.0 1e-69 MIERNDGYFYSVSDFLKKTKNTEIEKYYINTLANLITVKSGYEEIIENLIGQGLQNIVTW SKKDTREIINFVNKNKLGRITFLPLDSIKQNKKARVDEKEVIAMAYDLVSYDDRLENIIN HFLSNTVVVKNIDDAISLSNKIKGYRIISLQLDLINTWGSMAAGVNKSRKSNINILNRNK KINEIKARINNLRNERNELLDSFNNIKIEIEKNKEILVKNEQVSLDLKEKYSNKNLELDR KTYQEETFLQRIKELKESLRESSEDEEFKDIEKIKLDLEDISKRIKNLENQADEKNNLIN DLSNQIFKNKNSLEIYTRDLNILENRIGEDQNILINLEENIKFNKRLKVSLDKTLENLEN EISLSKDKIEKSKNSLDKFEQTKLDLNKEIDDKKKANHELLSLSKNIENELNEYSMKIVQ FNYKLEDISKDLKNLEDEIRPFISKPLDKLKENNYEEKELSVKKDDLFDLQKKLGKIGFF DENSKENFRKINEEFEFLDKQKIDLELAKKDIEKMIKKLENDMKDEFIKNFNIIDRKFQR IFKELFMGGNAKLSLDSNELLDAGIDISACPPGKSTKNISLLSGGEKSLTAVALLFAIFE TNPAPFSLLDEIDAAMDESNIKRYIDYLKSLSNNTQFIMITHRQTTMQLAEKIHGVTIGD GGISKIYSIDFEQNN >gi|325480266|gb|AEXN01000033.1| GENE 22 22045 - 23439 1302 464 aa, chain - ## HITS:1 COG:Rv2922c KEGG:ns NR:ns ## COG: Rv2922c COG1196 # Protein_GI_number: 15610059 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Mycobacterium tuberculosis H37Rv # 5 192 85 272 1289 201 51.0 2e-51 MVIYIRLESVELKGFKSFAERTKIKFNNQITAVVGPNGSGKSNIADAIKWVLGEQSVKSL RGKKMDDVIFQGSDQKKPMNMAEVNLSFDNKDRALSSDYDLVKISRRIYRNGDNEYRLNG KRVRLKDVKELFLDTGIGKEGYSVIGQGRIDEILNSSNQERRNIFEEASGIATHKYRREE SLKKLSKVDDDLEIIQREWEYKNKDKNKLEIEAKNFDKHHEIEELLDKKSYYFYISRSKS LEEKNKELIEDIKNIKKSQEEKTKEFDKVNESLLPIADSIRNLEKNYEKICQDILNKEKN IDKLTNKIQLDEQKLSYNQKDLERNKKDFESYDEKIKKYKISLDDQKSKLDQTKNLIKNL EIENEDFLKKKKQNLSTLSTIKNDLVSLKDSEKKLNKLIYDYDIDQKTRLILKERRDKNN KEIKEKISDFEKELTDIKGDLSAFKEEKNALSKKLMIQMKTLIK >gi|325480266|gb|AEXN01000033.1| GENE 23 23423 - 24499 1098 358 aa, chain - ## HITS:1 COG:CAC1749 KEGG:ns NR:ns ## COG: CAC1749 COG1243 # Protein_GI_number: 15895026 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Clostridium acetobutylicum # 1 313 1 309 358 272 47.0 7e-73 MSKKEYIIPIFIPFLGCPHDCAFCNQVKITNYKDSINKENTIKQIDQYLSYFPNNDNPKE IAFFGGSFTGLETDVMISYLEIALAYKKKGIIDRIRLSTRPDYINNSILDILKKYEVDVI ELGIQSLDNEILNANERGHSREDSIKASKLIKEYGFKLGHQIMPGLYKDSYDSAINTGLE SIKMNPDMVRIYPTLVIKDTKLEKLYKENLYKPLTLDEAIDISSKLYMIYSYKNIPVIRI GLQPTENINDKEDVVAGPFHPSIRQLVESNIHKIYLEELIKNFDFKDNIIIHVGNREISI ISGNKKSNKDYFYKKYGLIINFKNDSEEFIEYKDKKIPYDIEGFIKKFVEKTYGGDLY >gi|325480266|gb|AEXN01000033.1| GENE 24 24492 - 25208 659 238 aa, chain - ## HITS:1 COG:BB0705 KEGG:ns NR:ns ## COG: BB0705 COG0571 # Protein_GI_number: 15595050 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Borrelia burgdorferi # 3 237 11 243 246 168 44.0 8e-42 MTISKERKEELEKLEESIGYIFKNKNLIDVALTHSSYINESKDKNRSSNERLEFLGDSIL DLVVSEELYKNHKSYPEGKLTKIRSRIVCTSSFSKASEKFNLSSYLLFGKGEISHNGREK KSVKADTFEAFCAAIYLDAGYVFLKNFLMENYYQTVKELLENDLLFIDYKTKLQEYFNKT NRTILKYKLAKEEGPEHNKTFYMDVYAKNKKLSTGKGKNKKEAEQMAAMKAYKKLNHE >gi|325480266|gb|AEXN01000033.1| GENE 25 25208 - 25432 438 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212695677|ref|ZP_03303805.1| ## NR: gi|212695677|ref|ZP_03303805.1| hypothetical protein ANHYDRO_00194 [Anaerococcus hydrogenalis DSM 7454] putative acyl carrier protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein ANHYDRO_00194 [Anaerococcus hydrogenalis DSM 7454] putative acyl carrier protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 74 1 74 74 80 100.0 5e-14 MIRDELLELVRENLDIDVDEVDFDKAISDYDIDSIDMLDFIMAIEDKYDIEFSDDELDEI EKFSDVVSLIESKN >gi|325480266|gb|AEXN01000033.1| GENE 26 25429 - 26403 1163 324 aa, chain - ## HITS:1 COG:CAC1746 KEGG:ns NR:ns ## COG: CAC1746 COG0416 # Protein_GI_number: 15895023 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Clostridium acetobutylicum # 1 324 1 328 331 232 41.0 9e-61 MKIIIDTFGADYGIGIPIEGAIEALKSKEFIPCFSGEKEKIEKIIDGRIKSYEIIDAKEK IENNEDPVRAIRKKKESSLVKGFNKLNEEGYDGLVSSGSTGAILASGLFISGRIEGIKRA CIATSLPTYENTSLLLDTGANMDCKAEFLKEFAIMGHVFAKNVLNIENPSVSLLNVGIEE HKGNKLSKETYKLLKASSLNFVGNIEARDLFTGKTNIIIADGFDGNIAIKTAEGVISLFG KEIKDAIYKSVKTKIGGALIKDSLKENLSKYNSDGIGGAPLLGVKQYVYKAHGNSNKKAF ASAILGLIDYINTDTIEKIKGELK >gi|325480266|gb|AEXN01000033.1| GENE 27 26452 - 26631 266 59 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228003612|ref|ZP_04050600.1| LSU ribosomal protein L32P [Anaerococcus prevotii DSM 20548] # 1 58 1 58 59 107 79 3e-22 MAVPKRRTSKTRKNKRRASAYRLNKSSYVECPNCHEPMLPHRVCPSCGYHKGKEVLELN >gi|325480266|gb|AEXN01000033.1| GENE 28 26701 - 27888 1935 395 aa, chain - ## HITS:1 COG:TM0274 KEGG:ns NR:ns ## COG: TM0274 COG0282 # Protein_GI_number: 15643044 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Thermotoga maritima # 1 395 1 398 403 440 53.0 1e-123 MKILVINCGSSSLKYQLFDMDNEEVLVKGLVERIGIDGSRLKQEKGEDEYIIEEDMKDHT EAVKHVFDAITDKENGVISDLSEIDAVGHRFVHGGEKITKSVVIDENVREAVKEYSKFAP LHNPANMMGLEACEKLLPNVKNVAVFDTAFHQSMPEENFLYGIDYKYYEDQAVRKYGFHG TSHDFITQKTAQVLEKDQKDLNMISCHLGNGSSICAIKEGKSFDTTMGLTPLEGLVMGTR SGDLDPTVVTFLMNEYGYDTKKMDNVLNKESGVLGVSGVSSDFRDLENAANDGNKRAEIA LKMFANRAKRYIAGYMAEVGNVEAIVFTGGIGENSITMRESIMEGFEQFGIKIDPEKNNV RGGCHLVSTDDSKVKVFVIATNEELMIARDTKKLV >gi|325480266|gb|AEXN01000033.1| GENE 29 27900 - 28808 855 302 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849120|ref|ZP_08170612.1| ## NR: gi|325849120|ref|ZP_08170612.1| hypothetical protein HMPREF9246_0240 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0240 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 302 1 302 302 371 100.0 1e-101 MKKRGFLSVYVLLILVLLSISLSFIYKQAVNNQDSNKDIYNRKKAIYKEESIYSIIFDDK ENLIKILEEVDKINDHSWHDYNIKYFNQIEKFRCKKISDTYFSINSVNEIGDSRAELQVL LYLKEKYELKEEEKIILADKFDEFYKNIKFKTKKFKEYENYQMENDSENTFLKINKNLNI KDKKEKSNEISDEKNQEKNDSNLKNKEENYSNKSKAPIRISGIVIIGNDLILENDLILDG LLIIKGDIISKNKSKLIINGQIISENDYSNLVKYSYDKDKALNYINDIENPKYIEIKSKK VF >gi|325480266|gb|AEXN01000033.1| GENE 30 28805 - 29275 457 156 aa, chain - ## HITS:1 COG:no KEGG:Apre_0653 NR:ns ## KEGG: Apre_0653 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 131 2 138 164 67 37.0 1e-10 MRKKGFTLIELICVLAISSILILLIDNIVKTNLSISKKTYEEELSYKNSTNCILYIENII RKADKIIDVKDEENFKLEINDGDKISTYRFGQEENTLYVYINNINSSSLNEAKIPIGFCK SSKISYDKKDKAFTIAIDFYEKNKNSKYRTYIRSLE >gi|325480266|gb|AEXN01000033.1| GENE 31 29272 - 29583 288 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849065|ref|ZP_08170557.1| ## NR: gi|325849065|ref|ZP_08170557.1| prepilin-type cleavage/methylation N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] prepilin-type cleavage/methylation N-terminal domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 103 1 103 103 140 100.0 2e-32 MKKKKGFTLIEVIISLALIGIISLYILPSIFSVYENSKKIKDDSKSLFIMQEVLERSKKR EIGQYEDEIDGIKIYTEISSYKENLKFIKVKNSKYELEVVVKK >gi|325480266|gb|AEXN01000033.1| GENE 32 29552 - 29983 332 143 aa, chain - ## HITS:1 COG:no KEGG:Apre_0651 NR:ns ## KEGG: Apre_0651 # Name: not_defined # Def: methylation site containing protein # Organism: A.prevotii # Pathway: not_defined # 1 138 1 148 149 76 32.0 3e-13 MKKRAFTLIELIITLAIISMIASLIMIRTEIISKFEEKKEIENLISDFNYCREKSLASGN NFEIQIKDDKYKIIKYADNSLVKEVELKYISPFNSYSLIFKPTGSVEKAKTLAFNSKYYK YRIIVSPIAGRIRSEKEKRIYPN >gi|325480266|gb|AEXN01000033.1| GENE 33 29991 - 30686 184 231 aa, chain - ## HITS:1 COG:DR2065 KEGG:ns NR:ns ## COG: DR2065 COG1989 # Protein_GI_number: 15807059 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Deinococcus radiodurans # 1 119 6 128 388 86 33.0 4e-17 MIIIFYFFIGSVFGSFAHLVCQRSIKGENIAFPPSHCAYCDKKILKRDLIPIISYLFLRG KCRFCHKKIPISYPICEIIGGLLFIFTFKKFCSIQGIFIFLSLIIGLIISIIDFKTLEIQ MVYVYILGILGFIYRIFYLKNYLGLIKIFLIFSLLFLIIYFLSKKNIGDGDYFFYISLFL FLENEKIIYLLLGSVWIGAIPAIFLAIKNKSTKIIMPFCPYIFLAYIIALL >gi|325480266|gb|AEXN01000033.1| GENE 34 30683 - 31051 470 122 aa, chain - ## HITS:1 COG:no KEGG:Mahau_1123 NR:ns ## KEGG: Mahau_1123 # Name: not_defined # Def: hypothetical protein # Organism: M.australiensis # Pathway: not_defined # 1 122 12 134 141 79 42.0 4e-14 MVKKLKSKKKAFTLIELIIVIAIIALLAAIAIPKYKMSKEKAAITAHNANISMLKTAASL KLNESSSSDKTIEWSDGKGDYKNYLDKWPKVPEGSDKIKGKEYTVTINPKDSSISISPGP VE >gi|325480266|gb|AEXN01000033.1| GENE 35 31062 - 32105 848 347 aa, chain - ## HITS:1 COG:CAC2104 KEGG:ns NR:ns ## COG: CAC2104 COG1459 # Protein_GI_number: 15895374 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Clostridium acetobutylicum # 2 345 54 396 396 152 29.0 7e-37 MRKINSNILSLFLKQLSLLIDSSVSIYDSLLIIIDQSLDKKLNKALVNISLSLKNGNGAY ESFLKEEKAFGSIITAFIRSGDASGKMPEILDELSGYLTEESKNKNKIIEALIYPIILLV VTIVVVILILTKVLPTFIEVFEDNGTKLPKSTKILLESSSFISENGLYILLFVLIFVFLI FLLRQREDYRFKIDKFLFTSIFFKKFRTINIEYKMSSLLFILKKGDVDIIESINIIKKSF KNLYLRHILDKVQYSLELGNSLSDSLENENVFTKLFIAMIRVGEDSGDMVDSLRKSKDYY ANEYIYRLKRLSSMAEPFLILFMALLVGFVVFSVAIPMFNSVNNVNF >gi|325480266|gb|AEXN01000033.1| GENE 36 32154 - 32711 852 185 aa, chain - ## HITS:1 COG:BH2424 KEGG:ns NR:ns ## COG: BH2424 COG0233 # Protein_GI_number: 15614987 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Bacillus halodurans # 1 185 1 185 185 175 54.0 5e-44 MYDKIIKDTESAMKKACESFEIRISKIRAGRANDSILDGLTFSYYGSQTPINQAATISTP EPRLLVIKPWDKSNIKEIEKAINKSDIGINPQNDGEVIRLPFPALTEERRKDLTKQVNDY SEDSKIQIRNIRRDSLDVAKKGEKSADLTEDDLFSIEEDIQKITKKYIDNIEKIAENKNK ELLEV >gi|325480266|gb|AEXN01000033.1| GENE 37 32701 - 33423 1031 240 aa, chain - ## HITS:1 COG:CAC1789 KEGG:ns NR:ns ## COG: CAC1789 COG0528 # Protein_GI_number: 15895065 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Clostridium acetobutylicum # 5 235 7 236 236 280 61.0 2e-75 MRDIKRVVLKLSGEALAKDKGFGFDDETIDLICENIKRAKDKGLEIAIVVGGGNFWRGRS GKHIERATSDTIGMLGTVMNGLRLQDTLEKMGIETRLMTAINMQEVAEPYIRRRAVRHLE KGRIVIFSAGTGLPYFSTDTTASLRALEIGADMILLGKKGTDGIYDKDPNKFDDAIKYEK LTYSEILQKRLTIMDSTATSLCMDNEMPILAFGIDNPENLVRIVEGKDIGTIVKESFDVR >gi|325480266|gb|AEXN01000033.1| GENE 38 33667 - 33828 74 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENEAIFKTLSLDFVGSNPTFPTAVKADLKCKINIYLSQSNDLKSLRGDVLLR >gi|325480266|gb|AEXN01000033.1| GENE 39 33792 - 33878 76 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRNRELIVRFFYGKIPKWKTRRSLKPLA >gi|325480266|gb|AEXN01000033.1| GENE 40 34456 - 34755 393 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849054|ref|ZP_08170546.1| ## NR: gi|325849054|ref|ZP_08170546.1| hypothetical protein HMPREF9246_0251 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0251 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 99 1 99 99 176 100.0 4e-43 MKYVDVFQCELNKTIPLEYVGKVKYIGESFGVDSLTNNREYNIVRDKDGDIKVVDDSNED YIYSLINPRPADGSSKGGTFYIIDDPNKELRSYGLEKYN >gi|325480266|gb|AEXN01000033.1| GENE 41 34752 - 35429 522 225 aa, chain - ## HITS:1 COG:no KEGG:ELI_3213 NR:ns ## KEGG: ELI_3213 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 2 124 282 404 526 114 45.0 3e-24 MGANCRHNWYAFFEGISERVWTKEMLDNIDPEPFEFEDKEYTFYEATQKQRQIERTIRKY KHRVMMYDKVGDDESKLIAKVRLQRQRQLYKDFNKAGKLRPTSVNTHVYGYNKDRYNEEV KSRKFRDIYTEKRFMQSRLDYIDHITNFKEFIPSKTIINHSKAIYKGDEIRVVNKLCEKY GGKPNEWSKMVGRVDSELYYFDVHWHEKNNIQYEMKFKHKSRRKK >gi|325480266|gb|AEXN01000033.1| GENE 42 35505 - 35639 73 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849118|ref|ZP_08170610.1| ## NR: gi|325849118|ref|ZP_08170610.1| hypothetical protein HMPREF9246_0253 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0253 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 44 1 44 44 79 100.0 6e-14 MLVRTTLNQVTSNIYLMNAEGMGEDLMEISAHAGARPSHAGWKG >gi|325480266|gb|AEXN01000033.1| GENE 43 35735 - 35947 61 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSLLIYLGIKKDEQKLALLVFYIFVQILYGICISNLYVIKFFVHENPFFDCACDYHNYT LFSHKCIKIE >gi|325480266|gb|AEXN01000033.1| GENE 44 36102 - 37949 2115 615 aa, chain - ## HITS:1 COG:PAB0626 KEGG:ns NR:ns ## COG: PAB0626 COG2217 # Protein_GI_number: 14521140 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pyrococcus abyssi # 16 612 91 689 689 431 40.0 1e-120 MLESMTDAHKKELSKLIAIGIFTAILAVLSNTIGENIWIKVGFLIVYLISAWNILIKGFK GIIRGQAMDENFLLTIATIAAFFLGKYTEAIAVILFYNFGDLFENIASHKSRQNIEGLLD LVPDVANKVNPDGSTTEIDLDDVEVGDILLVRDGEKIGVDGVVIEGHGLLDTSSVTGESM PVEAEVGSEIISSSLLTEGIIKMEAKKEFDDSVAAKIMEIIEDSAESKSQSEKMVTRFAR IYTPIVVAIALIVAIIPPLFFGRDWYDSIFLAATFLVISCPCALVLSVPLSFMSGLGLAS ENGILIKGSQYFEGLNNAKVLLSDKTGTLTTGNFKVKDIEYFTDHDREKILDYIYNIELM STHPIAKGIVESLDRDEKHDLFEEVTNEKGLGVRATSKDGDLIKIGSARFIGYDGEENDR AIYVSIDDKLAAKVIIEDEIKDQSFETIEDLHKHFENIAVVSGDGKNAVEETAKELGLDD YYAEVMPDQKLEIMKGYQDKGLPTVFVGDGINDAPVLTNADVGISMGETASDLAIESSDI LVVNGEFREMSKLMKISDLTNRTVRQNVTFIMAVKIGILIAGLLGYANMWLAIFGDVGVT IIAVLWAMRILKKKI >gi|325480266|gb|AEXN01000033.1| GENE 45 37953 - 38177 315 74 aa, chain - ## HITS:1 COG:no KEGG:Apre_1409 NR:ns ## KEGG: Apre_1409 # Name: not_defined # Def: heavy metal transport/detoxification protein # Organism: A.prevotii # Pathway: not_defined # 1 73 1 72 74 64 50.0 2e-09 MKVKYKVESDDLCPNCAAKIEEAVKKIDGVNDANLSFLTLKLKMELADGADEDAIFDEAN RLADKLEPGTVFVR >gi|325480266|gb|AEXN01000033.1| GENE 46 38187 - 38480 230 97 aa, chain - ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 4 97 28 121 122 95 53.0 2e-20 MITIKDEEILFDLADLFKVFGDSTRIRIMNVLFSGPTSVGEIAEVLDMSQSAISHQLKSL KDNNLVSSKRSGRSMYYELADDHVKTIFMTGLEHIKE >gi|325480266|gb|AEXN01000033.1| GENE 47 38669 - 38890 220 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849023|ref|ZP_08170515.1| ## NR: gi|325849023|ref|ZP_08170515.1| hypothetical protein HMPREF9246_0258 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0258 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 13 73 1 61 61 83 100.0 4e-15 MTLILRKDITGSMMKLQTALSKKKKPFYYYSEYDTVEVSEEECEELKNQYISRFGGWEKI DLEHTEYNGKKWY >gi|325480266|gb|AEXN01000033.1| GENE 48 38911 - 39114 222 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRANRQGVEWFDYCFAEDTIELSEDEKELIRAERREERRLREARKRREEYQRKKGRGLLE NSLAMVF >gi|325480266|gb|AEXN01000033.1| GENE 49 39994 - 40374 504 126 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849073|ref|ZP_08170565.1| ## NR: gi|325849073|ref|ZP_08170565.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 126 1 126 126 215 100.0 9e-55 MNKDKDLKGNIKDIIDNLEKDYDHDNENGRSYSHEEIFYSMGRFINIMRKLYGNKLKSPE MTFTHNLILGRDYEKISSDYYNLFFRYNRFIKSERTAKVFLIANSLIEEGKVTSEDIRFY LLGLRK >gi|325480266|gb|AEXN01000033.1| GENE 50 40540 - 40971 560 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849036|ref|ZP_08170528.1| ## NR: gi|325849036|ref|ZP_08170528.1| hypothetical protein HMPREF9246_0260 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0260 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 143 1 143 143 232 100.0 6e-60 MKKIINGKRYDTETAEFIGRWENMYNSAELQYECEKLYRKKTGEFFIYGAGGPASSYAVR TGTHNWSGSSKITPITEGEAKKWVEKNLDGDDYEKYFELEEEGNIAYSFLVPENLYNKLK EKSEKTKKTMKDIIVEALESELG >gi|325480266|gb|AEXN01000033.1| GENE 51 41346 - 41717 443 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849087|ref|ZP_08170579.1| ## NR: gi|325849087|ref|ZP_08170579.1| hypothetical protein HMPREF9246_0261 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0261 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 123 1 123 123 208 100.0 1e-52 MDNNLKIFVIGMLAVLIVYSIITFLNYSKECSKEIKNEKISYALDRLDRIIRRAVGAANQ VVVNNAKEDGVFTTSYGKKVKDEVFETVLKVLGDEGKNLLNEALGDLDKYISDGIEDEVD KRK >gi|325480266|gb|AEXN01000033.1| GENE 52 41777 - 42169 367 130 aa, chain - ## HITS:1 COG:no KEGG:Tthe_0861 NR:ns ## KEGG: Tthe_0861 # Name: not_defined # Def: protein of unknown function UPF0150 # Organism: T.thermosaccharolyticum # Pathway: not_defined # 1 130 1 132 136 98 43.0 1e-19 MDKNYVTYGAIFTKEEDGGYSIDIPDIENCFTCSDTFEEGISMAQEVIGLVLYDYKDYPK MNVIDKSKLKNNQEVVYINVFLPYQFSLTKEVYKNKMLTLPTWLEMLAKQKNINFSRVLQ EGLKEELNIK >gi|325480266|gb|AEXN01000033.1| GENE 53 42205 - 42396 169 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849052|ref|ZP_08170544.1| ## NR: gi|325849052|ref|ZP_08170544.1| toxin-antitoxin system, toxin component, HicA family [Anaerococcus hydrogenalis ACS-025-V-Sch4] toxin-antitoxin system, toxin component, HicA family [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 63 1 63 63 118 100.0 1e-25 MKSYNSRELMKLAKKQGFRLDRVRGSHHIFVNDETGVEVPIPHPKKSYPIGTLKSILKGL GLL >gi|325480266|gb|AEXN01000033.1| GENE 54 42461 - 43408 712 315 aa, chain - ## HITS:1 COG:no KEGG:Amet_2548 NR:ns ## KEGG: Amet_2548 # Name: not_defined # Def: sporulation domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 1 234 1 229 322 191 47.0 5e-47 MSNSNLVNLVSYSPNHSGRRQNPITKIAIHHTAGVLTAAGIGSVFKSTSRQASCNYGIGN DNRIVLVVDEANRAWTTSSAWCDNRAVTIEVSNCQNGGNWLVSDRVLNTLIDLVTDICRR NGIKNCTYTGGKDGVLQMHRWYAQTTCPGPYLGSKFTYIANEVNKRLRGGKSTSTPNNLY RVRKSWGDSKSQKGAFKNLNSAIDLAKKNGYKVYDSSGKQVYPEIKSANTNNNNPRFIKY EKWTGVTLDVCNVRSEPNTRSKIVAQYPVGKEINYDQVWEGDGYRWISYIGATSGQRRYV ACRRLSGDTTPWIKF >gi|325480266|gb|AEXN01000033.1| GENE 55 43453 - 43818 242 121 aa, chain - ## HITS:1 COG:no KEGG:Apre_0863 NR:ns ## KEGG: Apre_0863 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 121 1 121 121 144 68.0 9e-34 MLELAKAISEYGILIVIAGLFLYFYISDKRVWQKNQDKQFERSNEINDKLTEIIAKNTSR LDLHETSLNKHSCDSKQSFDDLNSKVDRIDDKIDLLHSTTKELATKEMAEEIKEEVRNLK R >gi|325480266|gb|AEXN01000033.1| GENE 56 43878 - 44519 698 213 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849136|ref|ZP_08170628.1| ## NR: gi|325849136|ref|ZP_08170628.1| carbohydrate binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] carbohydrate binding domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 213 1 213 213 369 100.0 1e-100 MYELKAKEYFEGKDETQVRIQQDNPWRDFIIFLKGDKRGESDSILIELGLNEIAKEANPN IAISKLDNIVAELKKEIKTAFETLVLSKDLNKEQKENILNQYKPYQVGKNYEENEKFTYK GKVYETIQAHRSQTTWLPESTPALYREYLNVEIKNQDGSTTEVVKEFIQPTGAHDAYNEG NKVLFKGKIYKSKINTNTFSPEQYPDGWEEVTE >gi|325480266|gb|AEXN01000033.1| GENE 57 44567 - 45049 444 160 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849030|ref|ZP_08170522.1| ## NR: gi|325849030|ref|ZP_08170522.1| hypothetical protein HMPREF9246_0267 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0267 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 160 1 160 160 311 100.0 9e-84 MLVKHNFILNGGILQSPEYMYNESGANVNIKNHKVYINNLKTSTGGFTKDGMREKNIEIS ADKTYYIGFFGSVDGDIDIYKGKYKPYKTKGNFNYIELKGSEIQWPTQIRSYTGANVILE SICMFEEEIGDIFIPCIEDLPKDKQALLPLEGEYKEIQPM >gi|325480266|gb|AEXN01000033.1| GENE 58 45043 - 45549 471 168 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849135|ref|ZP_08170627.1| ## NR: gi|325849135|ref|ZP_08170627.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 168 1 168 168 297 100.0 2e-79 MRINENLLLNNDKLSIPNYETTKSVVNFKNGRIYFNNLNSFISNMTVDNNAESLSQNIDL NATYYVGVYGKSDKTLRIYKGETYKIAKTIGDFHYIEMRGDKIKGATYILSNESANGYIY ALGIYKDFPSDIYIPNKNSVKADNQAVFLSGGYFRRFFHSRSRGGALC >gi|325480266|gb|AEXN01000033.1| GENE 59 45546 - 46775 1607 409 aa, chain - ## HITS:1 COG:no KEGG:M5005_Spy_1000 NR:ns ## KEGG: M5005_Spy_1000 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS5005 # Pathway: not_defined # 1 133 1 123 200 76 39.0 3e-12 MSLNTLNLKQKQGGRVIKQADRSSTFKFALQDINGALINLNGKEADISLFNPNIKKYWST KSTVKDAEVEFKLPGNIEENDYVLEISVGGYVFPSDNDFIIEVVKGFKDLPDMETGLRYK QTIEEITDDYIKRSDKKLKDNLNSIDNTKKQVDESINKSIDNFNSKVQTYSENLLDTYNA LENGIEEISNSTKNLIDSTGNSYIALIGSKKYQALKDIDGQVKVSTDKYLGEYSKKLNDR VEKVPGKQLSDNNFTNLYKNKLDNLDTSINNKVKNKAEKDEVKEQLQEVKDLIFDNTVKY ANDTVYVLDTKVESGEVKVVPKEIGKLVANDFLKVNVDSDKYKFRIKATSQGIILFYSMT DEALRYAIHVYPQIKDYEIDFGKKVTGEMIFTSVTMPEDKVSVIREEGV >gi|325480266|gb|AEXN01000033.1| GENE 60 46779 - 46946 265 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDDMIQAYIDTLMQSNHDLVMAKSTIIKLNRENNELKKEIKELKEKEDIEEVKED >gi|325480266|gb|AEXN01000033.1| GENE 61 46951 - 49485 2624 844 aa, chain - ## HITS:1 COG:no KEGG:ELI_3101 NR:ns ## KEGG: ELI_3101 # Name: not_defined # Def: KID repeat family protein # Organism: E.limosum # Pathway: not_defined # 32 598 35 578 1670 119 26.0 6e-25 MLIINTKTKEKIAFSYFKHLKVEIEINELDRLNFEIPKEYRYLFDVEFLIIEDMQEYVVK NIEPFYDGFKIECKANNIDWLEKFNKSFNFPYKKFEDVLIGIMPDDWNYEVLEAIDERRT ITADHKSSWEVFLEAVEKYDIEYRLDPYFKNVVFGKKMFSYKDFYLDIALNVEDKDIEVE SFEFATRIVPEGMNGLKINQINNGKDYLEDKSFNDRTITYYWKDERYTNIENLKKEAERK LKILSRPKTTIKIKVKDLRKAIGVQGPSYVNKGKLYDAYFDVGDYVYLLDNDRKTKERFR VVRMVKYPYRKMDNEITLSNKPKDIVDDMNETIELTKEMWEETRVRFETTENAIKSSVAT AKRYSDDSFKTYKTEREQTDSRIYESITESTTYVDPKTGQTKPIIDKQLEIDKTIDGINI SLRDQLTANKDFNLRLDNLRTNISENTSSLNSKIDKDLAKAKKELGDSIDYTKIDFKKRH DLLALELEKANNDINKAKEKISGLSNNFDDFNNRANNKYEVIDREILGIKSNFKVARDEI SSEIASASKTQEKAIKEMGDNTESKIKTFLNLNYSTKTQTDQMIKSEVGMLGTSIGKDMS NLNREVLEAKSMVEQTQRGVSAIVSQVESGLDEKIKNLNARVNIQADKIESKVSKDGFGS LVKQEFDRYKIEARNIDFDGSYINAKGTFRTMNDSNDVGVEISYNHIEFRDNRWNGKTFG GLTVTRREGTEAMMSMNLAHYATGYLGIRYWSNDAKAYYSYTDYDKWNYTGYNKATWYGE YHAFPIIYHEGVQFRRQVRFINDYDKANGCTVWVTRSQLHFWMDGFPKSFILDFETEKAY WVKE >gi|325480266|gb|AEXN01000033.1| GENE 62 49479 - 50150 424 223 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849128|ref|ZP_08170620.1| ## NR: gi|325849128|ref|ZP_08170620.1| hypothetical protein HMPREF9246_0272 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0272 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 223 1 223 223 421 100.0 1e-116 MIETINLIKDLKIYNAHVLAYPEIGNTEVIRDEFISDTGLIFYSKKRSALTPVSFSVEFK GDKKEIRKNRNELSKKLELSTITFDNEVFYRGRFLSKDVDTRYFYQNITYEGQAIAMLKT QSNEIPIGKKTTIYNNGNLPTPCRIILEGSGNNVSIKGFKSEIRLKKFENKVIIDSEKGF LNFGPDNIIELMEFPYIDDFVDVEVNGTGDFSCAIEFEGRIIC >gi|325480266|gb|AEXN01000033.1| GENE 63 50147 - 54796 5839 1549 aa, chain - ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 72 406 204 536 696 194 33.0 1e-48 MASDGKLLFDTKLDTSGFKSGLSSLSAMASAAGKGFKSISDKAVSGIKTGFKAAGVALGA FGGYSVKAGADFDAAMSEVKAISGASGKQLEALRNKAKEMGATTKFSATQSAEALKYMGM AGWSSQEMLDGLPGVMNLAAASGEDLGLVSDIVTDSLTAFGLKAKDTGRFVDVLAAASTA SNTNVSMLGESFKYVAPVAGALGYKVEDVSVALGLMANAGIKGSQAGTSLKSALSRLSAP TKQVQEQMNALGISITDSKGQIKPFNQLMGEMRESFKGLSEDQKVQAATTLFGKESMAGM LAILNASDEDFNKLTNSINNSTGAAKKMADTMNDNLKGDIKILISALEGLGIALFEHVDG PFREVVQSVTKQVDKLNQVVTKDIGQLPTVLGNMIAQGAVYIAQKAPKFIEAGKTIILSF LDGLQKNSSSLADSAAEIITRLVSAFMEVGAKLFDVGGDILVKLAEGLSSRADVLAPKAL EIIGKLAESFNRNAARLLKVGIELLVNIAKGLAQNPDIVVKAVPQILMALSIAFAAFKGP AVAKKMMASLAKGLLGEKTAVSKSAQGIISNLVQSFNSKGLELNKTGGELISKLVKGISS KKSSMTNAGSKIISPLIDGIKTGSGKLTGAGGKIVSLLSNGISKVGASKLGTVGGGLIKS LGGGLSKGFGFITSIAAKIIPLIAGVLSNPLGLVVVGGLLIAAIVKGFNLDLNKIANSAG KVVGSIANKIKQGASKLLDVGKSLVNKIGDGINAAKGLFAEVQAKGLISVLGSKLKSGVG KLKDIGKSFIDGIKDGWNENENKVADKAKELPDKVNSSVDGSETKPTGENMVGGVVEGLR DGSTDVSTAYKDLIKAGVSDSDARAIVRQEGKASVEEYAQAIYEGSGDVKSAYTAIRTSG LQTMEAAEKFFEIAGLNLDGFVNGTEEGGQTYRQKLQEMMDSGMTEIEAVEKLTEIAVNN MRGFKEGTSEGADGIIEEFNTMMEMGLTELDAFDEMYSKGQINVDAFGQGSAAGKEAALN IYRQLKESGLTSVEAMQAMYNMGLLNTNGFAEGTNAGKINVDAAYQALKQAGLSEADISE ILRGIGAQNANAFSEGIGSGQESVSSAYNNTFSNPLEARASMLFGTANEKGLNTGTNFAD GIESSTMDVTSRSQALGNTAVENLKSGEGVANSKGLELGSQYAGGIDQSKSGVDSSSQAI GQGAANSLNAQSDSFAQAGKASMDAYQSAIQTGASQATANIQQMGNSIASSLSSTTNKVK SSANSMMNSLTSSVTSGANRVQSAFSSLQAKINSTFSNLTSRVTSQSRTMMNNFSSAITS GTNKVKNQFNSMSNSINSKMSSTSSRVKSLANSMMNGLVSAIRSGSSRARSTISSMCSGM VGNINGYRGAFSSAGYNLMAGLSGGIYGGRSSVISAAVSVMRSAVAAAKAAAGIHSPSRV FRKEVGQMLTKGLGIGIGDEEDFVVKKIKNTMEAIRNKAKNAVLFDNNKMGANLAYSFAG GSIQNKQEIEVQVSNGAVTSIINLDSREIGKAVAPIVSQEISKERRRRG >gi|325480266|gb|AEXN01000033.1| GENE 64 54816 - 55424 484 202 aa, chain - ## HITS:1 COG:no KEGG:Clole_0828 NR:ns ## KEGG: Clole_0828 # Name: not_defined # Def: GP15 family protein # Organism: C.lentocellum # Pathway: not_defined # 1 189 1 179 190 105 37.0 9e-22 MIYLTEGLPTYVEVNHKKIELNTDYRAWIEYEQLMLDESKTDKEQLEKISKVCLKDKIIV ESLEQLEELFEGFLWFYALGKDFKENNNKKEEESDYEKPSLVYSFEHDWSYIYSAFVECY NINLFTVNLHWWEFKALLESLNEKCLFSKILSYRSKEISSKMSKDEKKFYRNMKKIYALP DERTAEEKEISFARSMMASMQI >gi|325480266|gb|AEXN01000033.1| GENE 65 55421 - 55819 611 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849051|ref|ZP_08170543.1| ## NR: gi|325849051|ref|ZP_08170543.1| hypothetical protein HMPREF9246_0275 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0275 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 132 1 132 132 209 100.0 4e-53 MAFKRQKRQIIKFEFEYQGENKETKYLRYEIEHNNDLANKLIEIGKLDFEKSTNDEAKKA LRKSFETILGYGSMDDIQAKVFEGDELLLTDYISIGNYLISEVDKANKELEKMFQAINSN NEVVDGIIVDEK >gi|325480266|gb|AEXN01000033.1| GENE 66 55892 - 56461 789 189 aa, chain - ## HITS:1 COG:no KEGG:Clole_0826 NR:ns ## KEGG: Clole_0826 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 16 151 3 147 167 91 41.0 2e-17 MAETKDIQSLKEFKGLVLRADVVSFMEVNGKYYRMKGFTDLPTSKETEEYSRKYVDEKSE RTAVTGMTSTTDFTLDRYKDNPVHNRIQEVFDKEQLADDATVNIVVVDFAKEIEGQKGKY FAIKRNHTIVPDSAGDGTDAYQYSGSFKANGAPVEGFAELGDGDTEWLTIKFTEGTGANT AGETSGRTA >gi|325480266|gb|AEXN01000033.1| GENE 67 56454 - 56786 274 110 aa, chain - ## HITS:1 COG:no KEGG:Clole_0825 NR:ns ## KEGG: Clole_0825 # Name: not_defined # Def: hypothetical protein # Organism: C.lentocellum # Pathway: not_defined # 3 107 33 137 137 89 41.0 6e-17 MEYGIYTEPISPTIKKYVDGDELKQFGFIFTTRSHMSGDLVTQLENSAFFDNLIEWIQEM NYKKEFPELEGDKYPTKLEIITNGYLSSADVGSSQYQIQMRLVYMEVNNG >gi|325480266|gb|AEXN01000033.1| GENE 68 56882 - 57232 367 116 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1294 NR:ns ## KEGG: EUBREC_1294 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 11 111 20 119 125 91 45.0 1e-17 MINFNRFEFDQVKALKKRDLDTGGKVQKFIDSECIRRMDPYTPKDIGTLIGAATSQTSIG SGKIIQQTPYAKRWYYEPANFQGAPMRGNRWFERMKSSHKDSILRGAASIAGAKAK >gi|325480266|gb|AEXN01000033.1| GENE 69 57229 - 57585 365 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849088|ref|ZP_08170580.1| ## NR: gi|325849088|ref|ZP_08170580.1| hypothetical protein HMPREF9246_0279 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0279 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 118 1 118 118 229 100.0 4e-59 MKTNAQVTIIKRYVENRQDIYAEYGTYPCHWEETRGINTNRTGRSRDDIDKITCYIPNHL LKAVEVEDLIIRNDELKEIKQLASAKEFRKLYGARTVTVCDVFDFGSKKMQHTRIGAK >gi|325480266|gb|AEXN01000033.1| GENE 70 57575 - 57976 492 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849027|ref|ZP_08170519.1| ## NR: gi|325849027|ref|ZP_08170519.1| hypothetical protein HMPREF9246_0280 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0280 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 133 1 133 133 235 100.0 8e-61 MLTYKEFKEKCPKLDLSEGIFLSLQRRIKRRIDFLTFERIDDNDLNLQKRVNEVIIDILN ELYFSDIGFLKDNESDSSFNIKAETVGEYKIEYASANTLSSDKKDGLMASLIDERIREAF VHTGLMYRGIYEN >gi|325480266|gb|AEXN01000033.1| GENE 71 57995 - 59047 1548 350 aa, chain - ## HITS:1 COG:no KEGG:Sterm_1431 NR:ns ## KEGG: Sterm_1431 # Name: not_defined # Def: hypothetical protein # Organism: S.termitidis # Pathway: not_defined # 5 316 4 333 357 270 44.0 6e-71 MPKLFDKTYFNAEVFEKYVDTIERERTNELLNSSAIVERADLKTRMDEQVGGNIIVTPIA GILSGDADNYDGQTDITSDSTNTFYQKRVVIGRAHSWTEKDFVFDITGGHDPMKTVANQL LDWWEDLKQNSLLAILEGIFSMSKAEDKKFVDGHTYKDEVFGQVTLNNALQQAFGSRKKN FAAAIMNSAVSTQLENLNLIQYVKYTDSRGIERPLALANLNGRPIIIDDSLPVSKEGEYT TYIFGQGAFEYTKAGAKVPYETGRDPKKNGGEDMLFTRDRYCFAPRGISFTETSMASLSP TDDELRKGTNWEVVKNEDGTFPLNQIPIARVITKLKAAKPADEGTASPAA >gi|325480266|gb|AEXN01000033.1| GENE 72 59058 - 59624 775 188 aa, chain - ## HITS:1 COG:no KEGG:SPH_0103 NR:ns ## KEGG: SPH_0103 # Name: not_defined # Def: phage minor structural protein GP20 # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 3 153 5 154 187 64 34.0 2e-09 MKTEELKEIGLNDEQIAKVFKLRGKEVEDYNQLKNNFETLKTENENYKSQVASANEQIES FKDMDIESIKASAEEYKNKYEQAQIKAKEDMDNITLNNAIDLGLVNAGSRNLKAAKALLD IDSLKDSKNLNDDLKAQIEGLKESDSYLFKGQEEPKQRSMGKSGSLGDKELKDMTYEEML EANKKGIL >gi|325480266|gb|AEXN01000033.1| GENE 73 59621 - 59776 106 51 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENGTVCKTVSLAFVGSNPTLPTTVKADLKCEINTYLSQSNDLKSLKGDVL >gi|325480266|gb|AEXN01000033.1| GENE 74 59862 - 60182 252 106 aa, chain - ## HITS:1 COG:no KEGG:MGAS10270_Spy0567 NR:ns ## KEGG: MGAS10270_Spy0567 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 11 102 233 325 330 88 49.0 1e-16 MLETLKAIPSLEISNKDYKEFSEIKDSIIYLDPPYKDTKKVYKHNNLNYEEFYSWCEDMS KDNIVLISGYEMPKNFECVYEFTKAKSTLQGGTHKNKYEKLYTIKN >gi|325480266|gb|AEXN01000033.1| GENE 75 60154 - 60795 466 213 aa, chain - ## HITS:1 COG:no KEGG:MGAS10270_Spy0567 NR:ns ## KEGG: MGAS10270_Spy0567 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 5 164 13 172 330 181 65.0 3e-44 MKILLDEKQIRKGRPIGLPYIGSKKKIAKKLIEIIKQNFGTDKTIYDLFGGGGAITLECK VQGLDVVYNDIDPIPGQMIQKILSEDREYLKTLICSREEFFKIRDKENKNIDDYLKLLIN SFGNNSISYLYSKKDSEFKYNLAKDIIDNHDCFEGYKQTETYKRFVAQSGKDSRLQQLQH VAQTERIIEGGYRSPKNSNFRTFGNARDTKGYP >gi|325480266|gb|AEXN01000033.1| GENE 76 60843 - 61103 178 86 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849061|ref|ZP_08170553.1| ## NR: gi|325849061|ref|ZP_08170553.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 86 1 86 86 129 100.0 5e-29 MKLTIKYYPKLPKRKWLLKREGGAYEQHAHFLFKKDAENVRRLIDGNKYPYNKKYKIAMQ RILTEEEFKKLDKKQRYFNINKGIRN >gi|325480266|gb|AEXN01000033.1| GENE 77 61105 - 62244 1099 379 aa, chain - ## HITS:1 COG:no KEGG:ELI_3213 NR:ns ## KEGG: ELI_3213 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 1 370 1 380 526 227 35.0 7e-58 MLSPEYMERVTDNLIELYQDLEDAILEDIAKRINKNGYLTATAERQAEVLIENGYTSEEI GSLLNPYLDGIDEEIHDIVNRSSLKHYEDEMKAYRSVNKSLVDLSKNNHVNNTIASAMDR LIEGNGNITKSLGVVYNGENIKLNDFYKKSLNQAAFQVASGAFSRDQVVRNLINNISDSG IRVINYQNSGRNYTVESASKMLVRTTLNQMTGDISLMNAEDMGQDLMEISAHAGARPSHA EWQGQIVSLSGDNDKYLSLDDIGYGDVTGFMGANCRHNWYPFFEGISERAWTKEMLDDID PEPFEFEGKEYTFYEATQKQRQIERTIRKYKHRVMMYDKVGDKESKTIAQVRLQRQRQLY NDFNKAGNLRTNSINTFVK >gi|325480266|gb|AEXN01000033.1| GENE 78 62244 - 63599 1282 451 aa, chain - ## HITS:1 COG:no KEGG:ELI_3214 NR:ns ## KEGG: ELI_3214 # Name: not_defined # Def: phage minor capsid protein # Organism: E.limosum # Pathway: not_defined # 23 443 40 462 546 306 42.0 1e-81 MLDREIRERLGSLANNIDNNYKIWLDCYHGEPYWLKNDYDIDKSQSLNLCAAISSELARL VTMELETKVDDENIDLIYQRFIRHIRKFTEYGLALGGIVIKPYVEDYSRKLIDIDIVPAN KFIILGFTSFGDINHIVFIDRIKKKDKKDKDIYFTRLEEHDISDKYLISNTAYMSNNAET LGDKVNLNLIDEWADMADEMIVESDRPLFSYFKNPQANNLDLDSNEGISCFARAISLIQD ADEQYQRIMWEYEGSELAIDADITALKNTDTLPAGKERLFRNLGLDMGAGNKDFYNVFSP SIRDSSLFNGLNGIIRKIEFICGLAYGTLSDVEFTAKTATEINTSQQRSYSTVKDIQNEL ARCLEDFVEILKYWFKDLSIQFNDNCQVSFDFDDSLVVDSETEQKIRLQEVAAGILKPEA YLKWRYGVTDDELGEIQANISENREDVAEEE >gi|325480266|gb|AEXN01000033.1| GENE 79 63608 - 64927 751 439 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_1284 NR:ns ## KEGG: EUBREC_1284 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 22 436 1 425 429 233 34.0 1e-59 MEKIKKRKTIPFNFSDKHIDYIRKCADNTYNIAEGAVRAGKTVDNIYAFAHELKTTRDRI HLATGSTAANAKLNIGDANGFGLEYIFRGQCRWGKHKGNEALIIKGPYTQFRERIVIFAG AAKADSYKKIRGNSFGMWIATEINLHHKDSIKEAFNRTAAAKRRKFFWDLNPSSPNHFIY SDHIDKYQNMIDEGIDFGGYNYKHFTIDDNINISDQRKKEIKLQYDPNSVWYKRDILGLR VVAEGLIYKQFADIPDNYLIKEKPHELQLIQIGVDFGGNNSKHAFICTGISRGFKKVYAL RSERLEPDKPTDLYNQLIDFVRIIQSTYGNVDLIYADSAEQVLIKGMQKALIDANLNIKI KNSIKNPINDRIRLVNTLVASDRFFYTKNCESLVDALSTAVWKEEEMEDIRLDDGTSDID TLDAFEYSIEKFIKVLMNT >gi|325480266|gb|AEXN01000033.1| GENE 80 64914 - 65312 572 132 aa, chain - ## HITS:1 COG:no KEGG:SPJ_1871 NR:ns ## KEGG: SPJ_1871 # Name: not_defined # Def: phage terminase small subunit # Organism: S.pneumoniae_JJA # Pathway: not_defined # 1 108 57 164 166 82 41.0 7e-15 MASVEAHKLLRNPKVKAYVDKKLTEIEAETIAESKEVLQYLTSVLRGETHDEVYYKTEFG GEALGQVKVQNKDRLKAAELLMRRFGLNASDLEIEKQETQIKKTKTEIEIMKGISEEVED LDDIDGMIYGKD >gi|325480266|gb|AEXN01000033.1| GENE 81 65698 - 66168 307 156 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849082|ref|ZP_08170574.1| ## NR: gi|325849082|ref|ZP_08170574.1| hypothetical protein HMPREF9246_0291 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0291 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 156 1 156 156 245 100.0 7e-64 MVYRKRKSVLEVKNEIEREGVKKRLKKYRYDLDYIDMKMDKRDNLRASIDGIKACMSDSE AVQGGGSTQEEKIIKVIDKINDIDREIKEIRLENADIRYALKNLKDDDYRSIVYHIWIFN DMTMEQMGNKLHLSKSAIWKKSDHALKAISKILKKY >gi|325480266|gb|AEXN01000033.1| GENE 82 66178 - 66522 266 114 aa, chain - ## HITS:1 COG:no KEGG:bpr_II385 NR:ns ## KEGG: bpr_II385 # Name: not_defined # Def: hypothetical protein # Organism: B.proteoclasticus # Pathway: not_defined # 5 112 19 137 137 78 44.0 1e-13 MPRYSKYRAVKTEIDGIKFDSKKEARRYKELKLLERGKSISCLELQPIFDLIPKQIHNGK TIRKVVYKADFKYFDNNKKIWIVEDVKGFKTDVYKLKKKMFLFKYGNEFKFLET >gi|325480266|gb|AEXN01000033.1| GENE 83 66492 - 66707 316 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849074|ref|ZP_08170566.1| ## NR: gi|325849074|ref|ZP_08170566.1| hypothetical protein HMPREF9246_0293 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0293 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 71 1 71 71 121 100.0 2e-26 MNEIRPDYYKSNGIEAFDVIDAYNFNFNLGNAFKYIARAGKKDDKVEDLKKAITYLNREI EKCQDIASIEQ >gi|325480266|gb|AEXN01000033.1| GENE 84 66700 - 66993 417 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849072|ref|ZP_08170564.1| ## NR: gi|325849072|ref|ZP_08170564.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 97 1 97 97 167 100.0 3e-40 MRIRKNIYTKKDVDIIRKTEFEEGKNIGLDIALQQLIVIPMMFLRDKEGYGGGRLENFID YFKMTMDCLDDKRVSLKEMADTLEKETKISFKGILNE >gi|325480266|gb|AEXN01000033.1| GENE 85 67009 - 67305 323 98 aa, chain - ## HITS:1 COG:no KEGG:Apre_0827 NR:ns ## KEGG: Apre_0827 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 98 1 98 98 110 62.0 2e-23 MLNVEKLRQDREKAFDVWFEKWWKKEKLESKIKKANLKGYRGYVVRMDDYEEKERIWMRK EAFLLRLKDMLPDFRVEYKYAKNILTKNKFIYGIRIEW >gi|325480266|gb|AEXN01000033.1| GENE 86 67321 - 67683 412 120 aa, chain - ## HITS:1 COG:no KEGG:Apre_0826 NR:ns ## KEGG: Apre_0826 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 120 1 124 124 125 61.0 6e-28 MNFEELKELVLEWADDKDLLHEENADVQFGKFIEEVFEFKTDFDYLERIGQAPSEIYSDY EQIETQENMMLEMGDIFVTLIILCEDLEIDPVVCLEMAYEKISKRHGRTINGTFVKDEDL >gi|325480266|gb|AEXN01000033.1| GENE 87 67699 - 68040 577 113 aa, chain - ## HITS:1 COG:no KEGG:smi_0430 NR:ns ## KEGG: smi_0430 # Name: Pi3 # Def: prophage Pi3 protein # Organism: S.mitis_B6 # Pathway: not_defined # 4 112 3 110 113 103 52.0 2e-21 MSINLWEETIGVIENNNRTWDDVTHISGIDFQISKENYERVAKKTYYDSGFGAQEVANDL VIYGAGFLMKRGEYDGSEWWEFVDFGCTTNPPVVEINRLGGGMWNTLEELNEA >gi|325480266|gb|AEXN01000033.1| GENE 88 68103 - 68414 499 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849114|ref|ZP_08170606.1| ## NR: gi|325849114|ref|ZP_08170606.1| hypothetical protein HMPREF9246_0297 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0297 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 103 1 103 103 175 100.0 1e-42 MKYYVYGQKAESVGLGPYDGLKIDYDIADRILMAIKQGQSQYGSELKVKIYDDFEKYLIY GFELSYVAINFYDLVYIGEVVYTPTNNDVLSSLMLTLNVELRG >gi|325480266|gb|AEXN01000033.1| GENE 89 68444 - 68629 146 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849050|ref|ZP_08170542.1| ## NR: gi|325849050|ref|ZP_08170542.1| hypothetical protein HMPREF9246_0298 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0298 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 61 1 61 61 88 100.0 1e-16 MKIDLTVSDIGQIQQLIRQRKTSIFGWAKKYDAGYLSEESELEIETLNELYNKLLDYRKD M >gi|325480266|gb|AEXN01000033.1| GENE 90 68626 - 68994 312 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849121|ref|ZP_08170613.1| ## NR: gi|325849121|ref|ZP_08170613.1| hypothetical protein HMPREF9246_0299 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0299 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 122 1 122 122 249 100.0 4e-65 MKDLKPNFKRTFYRENRANGDFLNKPKITYSIHDTQVIDYCERFINAASKNHHIGCEKRI KDLKSIKLFEYPMPSISYAGKCWCGENIYKVITDGDLVYPAVHESFIKFFRPDLLDRLEM EE >gi|325480266|gb|AEXN01000033.1| GENE 91 69006 - 69197 286 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849070|ref|ZP_08170562.1| ## NR: gi|325849070|ref|ZP_08170562.1| hypothetical protein HMPREF9246_0300 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0300 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 63 1 63 63 96 100.0 6e-19 MKVKEFLDLFKDMDPEDELKFDLFEEVVDINGNYKERWTELSSEDLDYVDEDGNVHLTLA WCD >gi|325480266|gb|AEXN01000033.1| GENE 92 69200 - 69562 378 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849100|ref|ZP_08170592.1| ## NR: gi|325849100|ref|ZP_08170592.1| hypothetical protein HMPREF9246_0301 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0301 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 120 1 120 120 194 100.0 2e-48 MRFSDKDFINANEDGKNNLIERVCALDSHNFISKDALVEVVRYQDEKIKQLNSRYTCQED LKDWINRNWFTIEECISKQINKSLKGNFNTNDEVDREDLAESIASEIKDGIINVIDTYEE >gi|325480266|gb|AEXN01000033.1| GENE 93 69574 - 69765 258 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849093|ref|ZP_08170585.1| ## NR: gi|325849093|ref|ZP_08170585.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 63 1 63 63 103 100.0 5e-21 MKVKEFLEWFDDIDPESELKFDLFEEIINGNGDCTERWSRLFAEDLDYVDEDGNTHLTFV WLD >gi|325480266|gb|AEXN01000033.1| GENE 94 69762 - 70124 319 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849095|ref|ZP_08170587.1| ## NR: gi|325849095|ref|ZP_08170587.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 120 1 120 120 235 100.0 9e-61 MIYKVLKSELFIPETKLLGKYKLWGNRALNPIHICHSKTFGTKEDFEYMSFNSFWCGFNI ENFTLEIICNSYGGMCGFEFTREHLENPDLSKIDRDCMEYYFKFIDDLKENGVIEKEVEE >gi|325480266|gb|AEXN01000033.1| GENE 95 70121 - 70324 296 67 aa, chain - ## HITS:1 COG:no KEGG:Apre_0819 NR:ns ## KEGG: Apre_0819 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 67 1 67 67 62 59.0 6e-09 MSDKKYEFDLTGKQVEMINALIEREFELVIDMNETPSNWEELMYLASYLNFKLGFWKGRE ELVEVKE >gi|325480266|gb|AEXN01000033.1| GENE 96 70321 - 70539 325 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849111|ref|ZP_08170603.1| ## NR: gi|325849111|ref|ZP_08170603.1| hypothetical protein HMPREF9246_0305 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0305 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 72 1 72 72 120 100.0 4e-26 MTDKKYPVMLTKNEIKVINDAIDSYIASHVKKHCIMSDLYTIIRLNLELKYGITEIEEEE SFDRVIDKGVLK >gi|325480266|gb|AEXN01000033.1| GENE 97 70566 - 70838 132 90 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849103|ref|ZP_08170595.1| ## NR: gi|325849103|ref|ZP_08170595.1| hypothetical protein HMPREF9246_0306 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0306 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 40 90 1 51 51 107 100.0 3e-22 MTLKPTKDIKEYEKYGFKKCKGSYGKNGCYYLCVAKGCKMIFLSKEMIDIIDWSDSDPRI HKRPNCRYSDTRTALDIVIGLAINGMIITE >gi|325480266|gb|AEXN01000033.1| GENE 98 70835 - 71023 144 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849039|ref|ZP_08170531.1| ## NR: gi|325849039|ref|ZP_08170531.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 62 1 62 62 105 100.0 2e-21 MKTNIKIVFKDNTEWVFDANTFGFEEDGFCRLDFVDEEDRGSLVACVSTSEIKYSMFVEV EE >gi|325480266|gb|AEXN01000033.1| GENE 99 71020 - 71217 241 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849085|ref|ZP_08170577.1| ## NR: gi|325849085|ref|ZP_08170577.1| hypothetical protein HMPREF9246_0308 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0308 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 102 100.0 1e-20 MILKLKFNYACEVQVSEEEMLGIKKNLDDENSISEITEHVNEIFLADDGRTEMGKISNFN YEVEK >gi|325480266|gb|AEXN01000033.1| GENE 100 71214 - 71615 523 133 aa, chain - ## HITS:1 COG:no KEGG:Apre_0820 NR:ns ## KEGG: Apre_0820 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 127 7 132 142 150 61.0 2e-35 MRYKTEKEMIDRLVGKKIIDWSEDRLKLDDGSVITIEMTEFDCCATACGNFKDVKLNAVI TDIRFKTPILNSFDDYDETFTTQEVVFVHNQNKIAQADLYADNGNGDYYYSIVAFKIKDV YYAPLASYEGDEE >gi|325480266|gb|AEXN01000033.1| GENE 101 71625 - 72107 442 160 aa, chain - ## HITS:1 COG:lin0097 KEGG:ns NR:ns ## COG: lin0097 COG0629 # Protein_GI_number: 16799175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Listeria innocua # 1 136 2 130 159 110 44.0 8e-25 MNKVILIGRLTKDPELRYTQSGMAVCQFTLAVNKNLSKDKKEEMEAQNKATADFPRIIVW GKMGENASGYLKKGSQCAIDGAIQTGSYQDNNGNRVFTTDIVAQRVEFLSKSTQDGAEYN SNTNTKQGYQNRSKSNYGTNNDDFFDDDFQEVQDEGRIPF >gi|325480266|gb|AEXN01000033.1| GENE 102 72104 - 72553 410 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849076|ref|ZP_08170568.1| ## NR: gi|325849076|ref|ZP_08170568.1| hypothetical protein HMPREF9246_0311 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0311 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 149 1 149 149 241 100.0 1e-62 MKTKEFIKRVKELGFEVFNEDDYLVIKDEYESNVANVNKTTLAQMSTDYIEWDEIYDEDK TKLFDLLIEYAKTPIDERKEEKKFYLKHRWIKGCVIMYLYRNTLNGYCYLGDKKCRPHRQ KMFTLKEIEEIKEKYNTDLSDFEKKEVEE >gi|325480266|gb|AEXN01000033.1| GENE 103 72543 - 72743 202 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849064|ref|ZP_08170556.1| ## NR: gi|325849064|ref|ZP_08170556.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 66 1 66 66 107 100.0 3e-22 MEVIKNIDSKSRLVIKQVLSDKAFWVIEENHQGEWVEVLKICENQVEADSVVNFYLENRR RSLYEN >gi|325480266|gb|AEXN01000033.1| GENE 104 72730 - 72912 305 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849047|ref|ZP_08170539.1| ## NR: gi|325849047|ref|ZP_08170539.1| hypothetical protein HMPREF9246_0313 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0313 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 97 100.0 2e-19 MTFMYGLRHDPIKAYPREGLITGYVVNGYYVLYLEYSRQLGDDELKEYGIDYLGENDGSY >gi|325480266|gb|AEXN01000033.1| GENE 105 72909 - 73106 199 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849042|ref|ZP_08170534.1| ## NR: gi|325849042|ref|ZP_08170534.1| hypothetical protein HMPREF9246_0314 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0314 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 107 100.0 4e-22 MNFIRCKDKENKEAFINLDKVAKINKNNHKEKGCTYHLFVLVGGEVVKVKAGTIKSDCNI LEAIK >gi|325480266|gb|AEXN01000033.1| GENE 106 73111 - 74088 1313 325 aa, chain - ## HITS:1 COG:no KEGG:Apre_0808 NR:ns ## KEGG: Apre_0808 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 301 1 300 314 306 53.0 6e-82 MAKTIIEREFWNDEQIIDEYSPEDKLFMMYLLTCPRGNALGIFKLPIKLIAFEIGYSPEA VRTLVDRFTNKYNRINYDYKSQEIAIYRALKYTVSKGGKPIEDMMRQLLSEVTVTENIIK VHKVMSDWWLKSNRPVDKMIKSLMEEEIEKRSAISNVNVNDYVNDNVNVNDYTYPVSYHD TSEVEDFNTPSSKDESCNDREDDTSSDTWNKKIINTWNSLDKNIPRIQTLNVNTQRYQML RARINEHGLDTVIKAIKSIDQSKFLKGYVSDFRITIDWFIKPNNFIKVLEGNYNDKKQAT KLIDTEKSYTREARTRRFLRMMNER >gi|325480266|gb|AEXN01000033.1| GENE 107 74117 - 75028 941 303 aa, chain - ## HITS:1 COG:recT KEGG:ns NR:ns ## COG: recT COG3723 # Protein_GI_number: 16129310 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli K12 # 4 234 8 239 269 137 36.0 4e-32 MTNAKNALKKNAQNKAPAKKQNTTVRGLLMAMKGEIQNALPSYLPTDKFIRTALTAINTT PKLAECTQDSLLAAIMNSAQLGLEFNTPLGESYLIPYENKKLGITTVNFQIGYQGLLKLA YNTGQFKRITAREVRENEDFYINYGTGEVKHEPCLTGDSGDVIGYYAIYQTKDGGQDVFY MSKADAEKYGRTYSKSYNFSSSPWQSNFDAMAKKSCLIQVLKYAPKAIESQKLVEATKTD NANFKSYKKEDDGSINLDVDYEVEVEEDKKEAPKNVDKETGEIKSEDIAQTGFFEDDFEP VSE >gi|325480266|gb|AEXN01000033.1| GENE 108 75021 - 75959 863 312 aa, chain - ## HITS:1 COG:BS_yqaJ KEGG:ns NR:ns ## COG: BS_yqaJ COG5377 # Protein_GI_number: 16079682 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus subtilis # 4 308 9 317 319 232 44.0 6e-61 MKNIANITKLTREEWLELRRKGIGGSDCAAACGLNPWKSKAQLFFEKTGQIDSSLEDNEI LRQGRDLEEYVAKRFCEATGKKVRRNNFMMVDNEYPFMIADIDREVVGEKAILECKTTSP YGKSNWEDGKIPIQYELQCHHYMAVTGAEKCYIACLIFSTDFIIREIERDEEIIDMIRKQ EGEFWNDYVLANEVPAPDGTNLYDDSLKKRFKGGIEETKTIEIGNDTFKDYKERKDLIKK LEKQNKEIEQAIKLQMEDFNYGENEFLTVSFKPYTSNRFDSKKFKEDEPELYKKYVKQSE GRRFYLKEKVND >gi|325480266|gb|AEXN01000033.1| GENE 109 75965 - 76150 311 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849112|ref|ZP_08170604.1| ## NR: gi|325849112|ref|ZP_08170604.1| hypothetical protein HMPREF9246_0318 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0318 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 61 1 61 61 73 100.0 6e-12 MIEVKFKVPIKAKAQVAAYEDSDPDDILQAIKDEVLMWDIEDVEKSDIEIEYDSIEEVTD Y >gi|325480266|gb|AEXN01000033.1| GENE 110 76153 - 76335 205 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849025|ref|ZP_08170517.1| ## NR: gi|325849025|ref|ZP_08170517.1| hypothetical protein HMPREF9246_0319 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0319 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 60 1 60 60 98 100.0 2e-19 MEFIEEKIKEWPTKHIENRIIHLEKQGMNLDNCKLLKALDKELERRDRQQIAMLGDFYEV >gi|325480266|gb|AEXN01000033.1| GENE 111 76405 - 76647 373 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849075|ref|ZP_08170567.1| ## NR: gi|325849075|ref|ZP_08170567.1| hypothetical protein HMPREF9246_0320 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0320 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 80 1 80 80 135 100.0 1e-30 MENKKVRKRSEVKEIWDGTKYTKLDLILAAKPERDRKRDRMFLIFVSLLSLILALFGRND VIKTSGILVMFACSLLSIKA >gi|325480266|gb|AEXN01000033.1| GENE 112 76657 - 76857 273 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849062|ref|ZP_08170554.1| ## NR: gi|325849062|ref|ZP_08170554.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 66 1 66 66 127 100.0 2e-28 MENIIGISEAARLIGIAEQPLRCMLKSNKCTFGVAYKREGSTRHIYRIDKNALDRCLKGE QNLFKN >gi|325480266|gb|AEXN01000033.1| GENE 113 76867 - 77649 661 260 aa, chain - ## HITS:1 COG:lin0080_1 KEGG:ns NR:ns ## COG: lin0080_1 COG3617 # Protein_GI_number: 16799158 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Listeria innocua # 1 128 1 126 129 118 51.0 1e-26 MNNLKIFNNHEFGKIRIILDENNEPWFVGKDVAEILEYRNGSRDIKRHVDELDRKKEMVH DGNQLKETILINESGLYSLIFSSKMDKAREFKRWVTSEVLPTIRKHGAYMTDNVLERSIA DPDFGIALLNSLKEERARRALAEAQNEKNKPKVLFADTVSASKRSCLMGELAKMISQEAI RQGKLDKKIGQNKLFAWMRNKGYLCKGGERRNQPKQAYVEQGLFEIKKGTRLDGQGNNVV TSTTKITGKGQIYFVNKFLG >gi|325480266|gb|AEXN01000033.1| GENE 114 77714 - 77929 321 71 aa, chain - ## HITS:1 COG:no KEGG:Apre_0798 NR:ns ## KEGG: Apre_0798 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: A.prevotii # Pathway: not_defined # 1 71 1 72 73 64 47.0 1e-09 MIVIEKVNKKLGNKLRRMRISECMTRKQLADMFGVTISAIGMYEQGRRTPSDDVKAKYSM LFDKTVDEIFF >gi|325480266|gb|AEXN01000033.1| GENE 115 78109 - 78717 679 202 aa, chain + ## HITS:1 COG:lin1234 KEGG:ns NR:ns ## COG: lin1234 COG1396 # Protein_GI_number: 16800303 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 4 67 3 66 142 60 46.0 1e-09 MSVGVRLKQLRKSSGKTQRDLAKLLYVTASSIGMYERDERTPSPDVLKKYADIFDVSLDY ILGHSRNLKKGEDYATINVYGSIPAGIPIEAIEDISDTEDISFKDFDKNKTYIGLKVEGD SMYPKYLQGDTIILELTPDCESGTDAAVYVNGYEATLKTVIKNDNGTITLMPINTSYPPK TYGKDDDPIKILGIVKEIRRKI >gi|325480266|gb|AEXN01000033.1| GENE 116 78730 - 80139 1360 469 aa, chain + ## HITS:1 COG:no KEGG:LSA1108 NR:ns ## KEGG: LSA1108 # Name: not_defined # Def: putative chromosome segregation ATPase # Organism: L.sakei # Pathway: not_defined # 41 441 52 448 453 212 38.0 2e-53 MELLILIVCIYLISVIRNNKKLRDNGIRNFKDLENKKSKLEEEIKDLNNLYENNKREYNN FKEETKKVVIMEKSEEIEKEIKKKEDELKELKDKRYHIERDIKDLETHFQKINAQDLGLA PTSFEFEKSETYKEKLKNIRLQEADLLRKVKNKKGQNITIYQNDLIRLLYNSFNTYCDYN LTKLTFKSYPTRKKQIQTMFNKLNRISNQQIQIDEKALDYKFQELDASYAYYKLKEEEKE ALRQQREEEAENKRAQKELEAKQAKLDKEIDALNIAKDKINEKLISAKDDEIEALKLELQ KLENEISGLKDEKTDIDYRVENTGAGYVYIISNVGSFGNEVYKIGVTRRLDPYQRIQELS SASVPFKFDVHAMIFSYQAYQLENELHKYFDKQRINKVNNRKEFFNIKLEDIKKVLDLHK ELTFDFNPEFEAEEFRETLELKGEDPDTLGFYKIMKGIPMLKNTGLKID >gi|325480266|gb|AEXN01000033.1| GENE 117 80190 - 80795 676 201 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325849119|ref|ZP_08170611.1| ## NR: gi|325849119|ref|ZP_08170611.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 201 1 201 201 339 100.0 7e-92 MKLNKILIAALSVSLLVGCQDKNTDTKTETPSSVQETSNVEKSTTASNENEKANQVKNVI PTQVIQQSPGETQKENYITLQNSAIQYQQTGDAFLLDSEINDGTKVLAIPCKFTNKDSDT PINPEDPMMVLTKAIQEDGGVNHEIFLTVGASNDYKNDLNTTVNKGGEIDYTLFYELKNP SLGLKIIDKKSGTVVAEFKPE >gi|325480266|gb|AEXN01000033.1| GENE 118 80846 - 81973 1025 375 aa, chain + ## HITS:1 COG:no KEGG:Lebu_0394 NR:ns ## KEGG: Lebu_0394 # Name: not_defined # Def: integrase family protein # Organism: L.buccalis # Pathway: not_defined # 4 370 2 352 354 129 31.0 2e-28 MAKRRRKYANGQGSITHVKGKKSPWWARLPATYDSSGKEHRKTVGFFKTQKEAQNALDSY TLIDDIKTFKDIYIEYKKTDDFLNLTKKTKDRYEDAFLSFKPLWNKNIMDIKALQLQKCI NTKVLEGYYATEDGKRVRKDYSKDSISRLKHVASKIYNFAERHDLVDKNRAKVLEVKGLD PKPEKTIFFADEINKLFKSIPYNPYARHVLIMIFTGMRTSEYRNLKVDNIDFKNKMITDF GIKTNKGRKRIMFIHEKIEDILLELAKESTTGYIVENITINRQNKKATHPSDQTFRKSIF NKALEKAGLEKTIPKQCRYTFATIAHLSGISDMDLMDLMGHQSIMTTKNSYIQTIDFYLM QQLQTYDFRKALKLA >gi|325480266|gb|AEXN01000033.1| GENE 119 82476 - 82580 119 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKKSKSKVILRIFAVVVALSMVIPIVMNAIESL >gi|325480266|gb|AEXN01000033.1| GENE 120 82577 - 83170 499 197 aa, chain + ## HITS:1 COG:BH0924 KEGG:ns NR:ns ## COG: BH0924 COG2137 # Protein_GI_number: 15613487 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 36 196 43 209 266 71 28.0 1e-12 MIVENIEYSDKYNLVKLTISREFFYISYDFFNDLNISKDEDLDFDLYKKILSEDDFNRCK NEALRQISYRAKTSYDLIYKLKKKNYSSESIDRVIDFLNEYKLIDDENYVKSYINDKSSI SNWSKGKIRYKLKAKFIDDKLIDKYLDQISYDEEYEKAYNFALRKKESTDDKNKLYRFLA SKGFSYDIIKNVLGDLF >gi|325480266|gb|AEXN01000033.1| GENE 121 83170 - 83443 173 91 aa, chain + ## HITS:1 COG:VCA0739 KEGG:ns NR:ns ## COG: VCA0739 COG2827 # Protein_GI_number: 15601495 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Vibrio cholerae # 5 90 12 99 101 76 43.0 1e-14 MDDAYVYILRCSDNSLYTGWTNDIKNRLDKHNKGKGAKYTRARRPCKLVFYKKVNNKNKA MQIEYRIKRLNKKYKENIVNNFDRKKLELID Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:14:21 2011 Seq name: gi|325480263|gb|AEXN01000034.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00067, whole genome shotgun sequence Length of sequence - 2896 bp Number of predicted genes - 4, with homology - 2 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 29 - 124 102 ## + Term 212 - 243 1.0 2 2 Tu 1 . - CDS 159 - 2018 1682 ## COG3344 Retron-type reverse transcriptase - Prom 2199 - 2258 1.7 + Prom 2187 - 2246 2.6 3 3 Tu 1 . + CDS 2348 - 2512 62 ## 4 4 Tu 1 . - CDS 2742 - 2873 268 ## FMG_0964 hypothetical protein Predicted protein(s) >gi|325480263|gb|AEXN01000034.1| GENE 1 29 - 124 102 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLSLDFPPLHTVHATFTAHGVPSQERFSRFN >gi|325480263|gb|AEXN01000034.1| GENE 2 159 - 2018 1682 619 aa, chain - ## HITS:1 COG:BH0224 KEGG:ns NR:ns ## COG: BH0224 COG3344 # Protein_GI_number: 15612787 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 41 499 1 406 418 186 31.0 2e-46 MSTSKQTLKQSKIRYTEYYDLQKVLDDLYEDSSKNKVFSNLMELITSRENIKLAYRSIKG NKGSHTAGVDGRTIKHLSRLNEEEYISLIQKQFHWYKPRPVKRVEMRKPNGKIRPLGIPT IVDRIVQQCILQILEPICEAKFHDSSYGFRPNRSTEHAIAECARLMQIQHLHYVVDIDIQ GFFDNVYHAKLIRQLWNLGIHDKKLLCIIKEMLKADIVMPDKKVITPTKGTPQGGILSPL LSNVVLNELDWWVSSQWLTMPTHYPYKQRTNSQGTEIKSHTYRALRTSNLKEIYIVRYAD DFKIFCRNYYDAKRTYQAVTKWLQDRLKLNVSEEKSKITNLKQKYSEFLGFKLKVKPKGK KFVVQSHISDKALKNAKENISKCVADIKRPANEKEQYKAIAKYNATVSGLHNYYQIATNV SLDFAKIAFHIKKQMNNRLDIKTSGTLNKGFIKEKYGKSKQLRFLNGHPLIPVGYIRTKD AKHKKKVVNKYTVKGRAFIHKNLQIDVDTLVWLMRHPVLDKSIEFADNRISLFAAQYGRC GVTGVKLTPNYIHCHHKIPLEQGGTDSYSNLILVTEAVHILIHATKEDTIQKYIKELDLT VKQIEKCNKLRKMAELPLI >gi|325480263|gb|AEXN01000034.1| GENE 3 2348 - 2512 62 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDFHNNHSYSSTNTPSLMGIAVRQIQTFRPLHSEVRQCFGIHILTMRIRHPTYR >gi|325480263|gb|AEXN01000034.1| GENE 4 2742 - 2873 268 43 aa, chain - ## HITS:1 COG:no KEGG:FMG_0964 NR:ns ## KEGG: FMG_0964 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 43 1 43 71 64 90.0 1e-09 MEFFTAGVGVLKTLVTAIGAGLGAWGVINLMEGYGNDNRATRS Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:14:34 2011 Seq name: gi|325480258|gb|AEXN01000035.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00044, whole genome shotgun sequence Length of sequence - 7460 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 3, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 3394 3609 ## Apre_0739 YSIRK gram-positive signal peptide - Prom 3501 - 3560 10.8 2 2 Op 1 . - CDS 3620 - 5416 1397 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 3 2 Op 2 . - CDS 5472 - 5609 187 ## - Prom 5800 - 5859 8.9 - Term 5832 - 5875 8.1 4 3 Tu 1 . - CDS 5920 - 7458 219 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P Predicted protein(s) >gi|325480258|gb|AEXN01000035.1| GENE 1 1 - 3394 3609 1131 aa, chain - ## HITS:1 COG:no KEGG:Apre_0739 NR:ns ## KEGG: Apre_0739 # Name: not_defined # Def: YSIRK gram-positive signal peptide # Organism: A.prevotii # Pathway: not_defined # 1 1131 1 1127 2035 1194 65.0 0 MKKYKKNRVIFEEKVFDRKRKPVYGTRKLSVGLVSCMLGFMMFLPTSKASEEDIISTNQQ VEDKNQVLDKTDDFADQEKEEVTPLNDQTDSKVDSEENLSDQNLDGQNREEDIIKEENSD SNLEDKDEELLTADEIQAIRDRANSLENDYFFNDNMVEELKAELRKAKADPSVNYEEAKA RLIDEAIQKNAPDKEAPGEERAAVKVRKPTINPVSLESKTITGGNLEGSNKRKKLNKDCI IHVTVKDASGTIIETATTKIPPKGGSEWTVTLTKGLEAGYKVYAKQEFNGEFSDENSYEV KALLKDIHKDDLKMPSGQFWLEQTSSNIINDDEKAEALELLKKANPTIANDIESIDFKIY GIEDNKKASYIITYTDGSKTEEIQAPDLKIVPVTETSRGFTFDKVVVTNKSISGKLKGEG PFDNIKVHIVLNVSDQDTEFCKDGKCTITKNSSDPIEVKVNSDGTFSYDLKEGELSYNQK VGIFVKEIHKFKYCDKTTVMLASPEVTDVKDPRKLTQADKENIDAAIRKANTVGGASKLP EGSGDWDGLPAVIQFDENGNVKIFSGNDVAGTWDPNNDYKFVPETNEDGSYKLNDGAEAK ITIPGKDLVKNIKPDAPEIKVNEDDKTKITINAKAVDTDANVITVSYTCSDDSSKTLKAT KADDGTWSITEGEGSIDANGVVTLEVSKVKGGTNVTATVTDKGGIADDDKKALTSDQAEF KVTKATLVEALGGLDPVAIKKWVGDTVDWKDGVKAKDSATAENKVKIKEILDEATTKFTD ETTPGRNTDARGDFKGTIKVAFDDGSIIEVKNQNLYVSDHVTSIKRDNTPSDALEVEFKL GEGTKVDNTSGGAIEGNKDNPTSYSKYKVKPGTDLKEYKLPSINTSVVDSINVTTQDTYT EPVWKDSKNGTNFVASTENKVFTATATKTYKVTLTANGGKGEDKVEVKKTGEKYKLPEKS TFNPPNKNQEFSGWVIGDGPGINKPGDEITVDGDKVIKAIWKPIEFKVTFQTEKGATGSM DPVTIKKGDEYVIPKPTFKPEEGKEFAGWKIEGQEGLKKAGERIDKISGDVTLIATWKDI MVNVTYNAGGGSGEMKGATIKKGSNYKLSSNEFTAPSNKKFKAWKIGEKEY >gi|325480258|gb|AEXN01000035.1| GENE 2 3620 - 5416 1397 598 aa, chain - ## HITS:1 COG:CAC2247 KEGG:ns NR:ns ## COG: CAC2247 COG1961 # Protein_GI_number: 15895515 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Clostridium acetobutylicum # 28 518 3 504 523 117 27.0 6e-26 MNTKVKVIKASNKGARNRNALHLDLKRVAAYCRVSTDSKDQLESYKSQVDYYTNLIKNNK NWTLAGIYADEATTGTTATKRADFMRLISDCQNGDIDMIITKSISRFARNTLDTLKYVRL LKENNVGVVFEEENIDTLTMDGELLLTILSSVAQQEVENTSAHVKKGLKMKMEKGEIIGF QGCLGYDYDPITKSISINEEEAKIVRYIFKRYLEGNGGSVIGRELEEQGYLTPRGKTKWS DTTVLGIIKNEKYIGDILMGKTFTGDPITKRRLANFGESDKYHIENHHEPIISKEDFEKA QEIRLRRAQNRNTIANKDRKREKLLRQYAFSSMLECGFCGEILSRRTWHTSSIYKKINWQ CVRSTKKGKKYCPHSKGIQEAAIEKAFVESYRQLCHADSTVIDDFLKIVEEEINDNTLVK DLKKLENQLNRIISQGRKLVDLHLEDSIDEEVYAKKYKKLTKQKEELLDEKKTLELTIKD ENSIKERLKQFKKVLENREIIGEFNRTVFESIVEKVVVGRIDKDGTVHPYDLTFYFKTGV KDSQDSNKFKDKRKNAKDNDINKLCSYKNDDDKKSCSQAKDNTCGSSSLITKKIINLY >gi|325480258|gb|AEXN01000035.1| GENE 3 5472 - 5609 187 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQAIKIYSIRVAMLCRLYDLRLINEKEYTKIKNRLENDYKKMDRK >gi|325480258|gb|AEXN01000035.1| GENE 4 5920 - 7458 219 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 270 491 132 354 398 89 27 1e-17 SLVGKIMTQKSSQMAQTHAGYFMAAHKRIEIGEKIKRVPMGFFSSFSLGRLTTIATSSLS QAEMWVPMLLVLVLGGILNTLVFVIGTLIFNVKVGLVAVAGVLVFFIVTSMMEKKSSANA DKMTETQTRLTKEVLATLQGMQVIKSYNLGGENNRALRKSIKDTSNILLDLEISVAPYTV IQRIVMGITTVAMVYVSLKLNLSGELPLAETILMIMASFIIFEGLIGAGSNMAILRACEN AIDSVGFIDSMPDMREGSITEPIKNHDIVFKNVSFSYDDRPILKNVSAEIKENTMTAIVG PSGSGKTTFCNLIARFWDVNSGEILIGGKNIKDYKIENLMNSISMVFQDVYLFEDTIENN IKFGKQNASHEEVVQAAKKARCHEFIENLPDGYNTIIGEGGASLSGGEKQRISIARAMLK DADIIIFDEATASIDPENEDKLKEAIESLTKDKTVIMIAHRLKTIRNADQILVLKDGEIV ECGNHEELIKNNGLYSDLINAKAKAESWKLNN Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:15:01 2011 Seq name: gi|325480236|gb|AEXN01000036.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00040, whole genome shotgun sequence Length of sequence - 24206 bp Number of predicted genes - 21, with homology - 21 Number of transcription units - 12, operones - 3 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 348 401 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 377 - 436 14.4 2 2 Op 1 . - CDS 489 - 635 194 ## gi|325849184|ref|ZP_08170653.1| hypothetical protein HMPREF9246_1806 3 2 Op 2 . - CDS 693 - 2987 2615 ## COG0058 Glucan phosphorylase 4 2 Op 3 . - CDS 3012 - 4124 1513 ## COG3839 ABC-type sugar transport systems, ATPase components 5 2 Op 4 1/0.667 - CDS 4183 - 5643 1459 ## COG1640 4-alpha-glucanotransferase 6 2 Op 5 . - CDS 5645 - 6676 1267 ## COG1609 Transcriptional regulators 7 2 Op 6 38/0.000 - CDS 6681 - 7517 810 ## COG0395 ABC-type sugar transport system, permease component 8 2 Op 7 35/0.000 - CDS 7517 - 8362 822 ## COG1175 ABC-type sugar transport systems, permease components - Prom 8407 - 8466 4.4 - Term 8381 - 8428 1.5 9 2 Op 8 . - CDS 8473 - 9831 1740 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 10359 - 10417 4.0 10 3 Op 1 . - CDS 10511 - 10777 185 ## gi|212696718|ref|ZP_03304846.1| hypothetical protein ANHYDRO_01260 11 3 Op 2 . - CDS 10839 - 11030 177 ## gi|325849166|ref|ZP_08170635.1| hypothetical protein HMPREF9246_1815 - Prom 11064 - 11123 6.5 12 4 Tu 1 . - CDS 11192 - 11920 615 ## Apre_0068 hypothetical protein - Prom 11970 - 12029 9.8 + Prom 11828 - 11887 8.9 13 5 Tu 1 . + CDS 12010 - 12276 258 ## gi|212696723|ref|ZP_03304851.1| hypothetical protein ANHYDRO_01265 + Term 12322 - 12366 -0.6 - Term 12923 - 12952 -0.3 14 6 Tu 1 . - CDS 12964 - 14154 1837 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases - Prom 14186 - 14245 8.8 + Prom 14150 - 14209 13.1 15 7 Tu 1 . + CDS 14241 - 15158 678 ## COG0583 Transcriptional regulator + Term 15299 - 15325 -1.0 - Term 14986 - 15037 1.2 16 8 Tu 1 . - CDS 15121 - 16515 1396 ## COG1757 Na+/H+ antiporter - Prom 16756 - 16815 10.3 - Term 16912 - 16968 -0.7 17 9 Op 1 . - CDS 17026 - 18804 1199 ## COG1835 Predicted acyltransferases 18 9 Op 2 . - CDS 18794 - 19180 307 ## gi|325849175|ref|ZP_08170644.1| MORN repeat protein - Prom 19200 - 19259 11.7 - Term 19274 - 19306 2.0 19 10 Tu 1 . - CDS 19326 - 20453 1615 ## gi|325849167|ref|ZP_08170636.1| conserved domain protein 20 11 Tu 1 . - CDS 20898 - 22268 1451 ## COG1757 Na+/H+ antiporter - Prom 22316 - 22375 12.6 + Prom 22321 - 22380 9.3 21 12 Tu 1 . + CDS 22459 - 23412 1292 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 23421 - 23463 8.1 - 5S_RRNA 24057 - 24156 87.0 # AB109770 [D:5389..5505] # 5S ribosomal RNA # Finegoldia magna ATCC 29328 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis; Finegoldia. Predicted protein(s) >gi|325480236|gb|AEXN01000036.1| GENE 1 3 - 348 401 115 aa, chain - ## HITS:1 COG:CAC0113 KEGG:ns NR:ns ## COG: CAC0113 COG1349 # Protein_GI_number: 15893409 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 1 113 1 113 253 73 42.0 6e-14 MFLEERLKFIESKLNKDYRVNVSDLADDLKVSEVTIRKDLKELEEKNIAKRTHGGAIKIQ KNIKELAVDNKKTINIDLKKSIALKASKFLEDDIVIFLDSGTTTYMLVDYIKKYK >gi|325480236|gb|AEXN01000036.1| GENE 2 489 - 635 194 48 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849184|ref|ZP_08170653.1| ## NR: gi|325849184|ref|ZP_08170653.1| hypothetical protein HMPREF9246_1806 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1806 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 48 1 48 48 75 100.0 2e-12 MKYSYEFKKECVNFYREGKWTDKPKVIKEKILSDFCRNMTYTNKSFSN >gi|325480236|gb|AEXN01000036.1| GENE 3 693 - 2987 2615 764 aa, chain - ## HITS:1 COG:SP2106 KEGG:ns NR:ns ## COG: SP2106 COG0058 # Protein_GI_number: 15901921 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Streptococcus pneumoniae TIGR4 # 5 764 4 751 752 757 51.0 0 MEEKLKDLAQKLFGKEILDLDDKELYLLLSEFSNNLLNKIEKPKKSDRKLYYFSAEFLLG KLLKNNLSNLGIRDEVKEILSKNGKVIEKAEEFEAEPSLGNGGLGRLAACFMDSFANLGL NAEGIGICYHFGLFRQKFEDYKQKEVKDPWLDDSNALIKTDTKYDVNFKNQKVEATMYDL PISARKDSRSTIHFFDIDSVDESIVKEGISFDKKDIEKNLSLFLYPDDSDEDGQKLRIYQ QYFMVSCGGRYILDEYIKNGGKLEEFGDKIRIQINDTHPTMIIPEMIRLLTSKGLSFEKA VEEITKACAYTNHTILQEALEKWNYQMLEDVVPALMPIIEKLDEIVRGKYDNEKVYIIEN KKEDEKNPEKLTRIVHMANIAIHFSSKVNGVAQLHSDILVNETLKDFYEIYPDKFENVTN GISFKRFFHNCNEDLTKLIESLIGPEFKDDPNKLEELLKFQDDPEVLDKFLRVKEISKEN FSKYVKEKEGVDLDINSIFDVQIKRLHEYKRQQMNALYVIDTYLKIKKGILPKNPITVIF GAKAAPSYYMAKNIIHLILCLQELINKDEDVNKYLKVVMLTNYNVSYAEKIIPATEISEQ ISLASKEASGTGNMKMMLNGAVTLGTLDGANVEIRDLVGDENIYIFGKKADQIIDLYEKD SYKAKEIYEKNEDIKKAVDFIVSKEILEIGDKEMLESLHNDLINKDYFMALIDLEEYIEV KNKLIEAYTDKRSFAKMAINNIAKAGFFSSDRSIRDYNRKIWNL >gi|325480236|gb|AEXN01000036.1| GENE 4 3012 - 4124 1513 370 aa, chain - ## HITS:1 COG:BH1140 KEGG:ns NR:ns ## COG: BH1140 COG3839 # Protein_GI_number: 15613703 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Bacillus halodurans # 1 370 1 365 365 449 61.0 1e-126 MANLSLKNINKIYDNGFHAVKDFNMEIEDKEFIIFVGPSGCGKSTTLRMIAGLEDISSGD LEIDGKRMNDILPKDRDIAMVFQNYALYPHMTVYDNMAFSLKIKKMPKDEIDKKVKEAAQ ILGIENLLKRKPKQLSGGQRQRVAMGRAIVRNPKVFLMDEPLSNLDAKLRVQMRIEISKL HQKLGTTMIYVTHDQTEAMTLGTRIVVMKDGIVQQIDTPQNLYDHPRNLFVAGFIGSPQI NLIDVEVLKEDDGIYVKNDHIKLKLPEQKGRVLEDKNYIGKKVVFGIRPESLYDDDDYLE KTDQGSIIEAKVRVYELMGAEVYLYFDLGDDQITARVKPSTKARVGENTKFAFDMEKSYL FDPETKLIIE >gi|325480236|gb|AEXN01000036.1| GENE 5 4183 - 5643 1459 486 aa, chain - ## HITS:1 COG:FN0858 KEGG:ns NR:ns ## COG: FN0858 COG1640 # Protein_GI_number: 19704193 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Fusobacterium nucleatum # 2 486 3 497 506 327 40.0 4e-89 MKKAGILLPLQSINGDYGIGDFGEKSYEFIDIIKKSGFDMWQILPLNPLGYGNSPYQPYS SFAGDEIYISLELLYKDGLLDQKPKKLDQKSRIDYEFVRKFKEKYLKLAYENFKKNKGYE DESYKDFLKFDFVYNYGVFITFKKENGLRSWNQWPDEMKNWIRDKKLDLSPYEDKINYEI FIQYIFYKQWMKLKEYANKNKIKIVGDIPFYVGLDSLDVWENQKYFQITSDGREKLIAGV PPDNFSATGQRWGNPIYNWEKIKEDDFSFWINRLSYNGKLYDIVRLDHFRAFDTYWVIDA KEKTAIKGKWHLAPGYDLFKKVKKELNDVEFIAEDLGEIRPEVFELRDYFDLKGMVIIQE FLKPKEEKYIDAPENSVAYTGTHDNKTLMAWFDELDKDKKEDVKKLFEKLGIKNDTIYDD FFEFAMKRDSEYVIIPLQDILGLGDEARINEPATLSDKNWSFKFTSMENLKEKEEFLKEI IEKNRK >gi|325480236|gb|AEXN01000036.1| GENE 6 5645 - 6676 1267 343 aa, chain - ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 317 3 307 335 165 31.0 1e-40 MKRVTIKEIASLCGVSVSTVSRAINNNDEISEKTRKKILDTIKEVGYTPNQNARNLKITK TKTIAVLIKGITNPFFTPMLKVLEEEITKSGYTFALQKVEENSSEIDLAQKIVKTLKPEG IIFLGGYFINDRKKLKALSVPFTMTTIINQTLQIPSSACLGIDDFLQSKKLVEYLISLGH KKIALIGPRYDDESIGKLRLLGYKKALEENGIEFDEKLVFYSNKGLNPYSLEHGYEVGKK IVKENISCTAIYAISDTIAMGAIKAIDDFGKKVPEDYSLAGFDGLEINKYLLKPITTIVQ PASEIAYKSVKELFKIIDKKEYEKISKFDAKLYIGKTTKKVRS >gi|325480236|gb|AEXN01000036.1| GENE 7 6681 - 7517 810 278 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 9 278 35 304 304 349 68.0 3e-96 MKEKTINAILFVIMLFLLVIFLFPIGFILINSFKGKFFISDSPFSLPKGDSFAGLENYVS GLARTGFFQAAGWSFFITIISVAVVVLFSAMTAYYLTRVKNKFTQVIYYLFVFSMIVPFQ MVMFPTIKVADMLHLNNPIGMVVLYLGFGSGLSVFMFAGFIKSIPIEIEEASMIDGCSPI KHFFYIILPILKPTAITVAILNTMWIWNDYLLPYLVIGVSTPYKTIPVVIQMLVGSNGNK DLGAMMAMLVLSMLPVIVFYLTMQKHIVKGVAAGAIKG >gi|325480236|gb|AEXN01000036.1| GENE 8 7517 - 8362 822 281 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 1 280 1 280 281 323 65.0 3e-88 MEKILKKYFPFFVLPTFLVFCIVFIIPFILGIGLSFTKFTTIFNSEFVGLQNYVTALSSG QRFGKAFVFTVIFTIICVISINVLAFSLAVVLTRKIRGTNLFRTVFFMPNLIGGIVLGYT WQVMIDSFLLKFGQTLLANPKFGFWGLVILMNWQLIGYMMVIYIAGLQNVPPALIEAAEI DGASKGQILKSITIPMVMPSITICTFLTLTNSFKLYDQNLALTAGAPMYKTEMLAMNIVD TMFSRNGFEGVGQAKAVIFFIIVAFIAYLQIKLTREKEVEQ >gi|325480236|gb|AEXN01000036.1| GENE 9 8473 - 9831 1740 452 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 42 450 31 440 443 482 61.0 1e-136 MKLKKTLLATALLLATSLSLTSCGQKNDADNSSNAKSGDSAKGSVYYLNFKPEVEKVWNE IAKTYTDETGVPVKVVTAASGTYEKTLKAEITKSDAPTLFQINGPIGYKNWKDYTKDLKD SELYKHLIDKDLAVKDGEGVFGIPYVVEGYGIIYNDAILQKYIKLDGAKIKSVDEINNFE KLKEVAEDMQAKKADLGIDGAFACTSLKPGEDWRWQTHLANLPIFYEYRDNKVKDMDEVK FKYSDNYKNIFDLYINNSTVEPNALTGKAVTDSMAEFALEKAAFVQNGNWAWSQISEVSG NKVKAENIKFLPIYTGVKGEEKQGICVGTENFFSVNSKASEKDQKATEDFLNWLFTSDKG KEFVTKDLGFISPFDTFKEEDQPEDPLAKEVVKYMSNKDLYNVDWNFTSFPSQAFKDFFG QALGQYASGEMKWNEVKDSFVKSWKDEKAAQK >gi|325480236|gb|AEXN01000036.1| GENE 10 10511 - 10777 185 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696718|ref|ZP_03304846.1| ## NR: gi|212696718|ref|ZP_03304846.1| hypothetical protein ANHYDRO_01260 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01260 [Anaerococcus hydrogenalis DSM 7454] # 1 88 1 88 88 110 97.0 4e-23 MKKRPEIYIFLFAIIILIISIIVPYDSMEFIFGKGLRPLGFTSLYLCPICGIIGSIFSVK NKNYVFLFLNILLIFSFFFTNIIGYMIY >gi|325480236|gb|AEXN01000036.1| GENE 11 10839 - 11030 177 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849166|ref|ZP_08170635.1| ## NR: gi|325849166|ref|ZP_08170635.1| hypothetical protein HMPREF9246_1815 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1815 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 63 1 63 63 78 100.0 1e-13 MKNNISDYQIIGGVISYMIVMIISWTKKLPTSGPNAIFTAIVFSGMIYKIFIKKEKIICF LIF >gi|325480236|gb|AEXN01000036.1| GENE 12 11192 - 11920 615 242 aa, chain - ## HITS:1 COG:no KEGG:Apre_0068 NR:ns ## KEGG: Apre_0068 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 230 6 227 238 109 33.0 1e-22 MRNLTRKQILYDFDLKNDDLVENKNIFLNMKFKKESLTYNLYPTSIIGCGKNVLIKSDNK KMLEELKDELEDFPSEWFFEYENIYKIDKIIGKYGQKIVNFGPVFEPNKNFKKIKGSFKF EKIDLKNAEKYKKYKFIFDFDDPYFNSKFAYAYYDYEKLIALASFSKNSKYLWEFSCQKF SKDPKYKKLMSLMLNNMTYEILKNNKEILPITSSQFSHIDSMNLSINAGYKFAFSFIAID KK >gi|325480236|gb|AEXN01000036.1| GENE 13 12010 - 12276 258 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212696723|ref|ZP_03304851.1| ## NR: gi|212696723|ref|ZP_03304851.1| hypothetical protein ANHYDRO_01265 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01265 [Anaerococcus hydrogenalis DSM 7454] # 1 88 1 88 88 115 98.0 1e-24 MKTTVIFIVILIISAIVNILLLSKFSFGDDRDRKIFNKTCSHTLMAFIIYLLLDMILPFT NNTDSFTNLFVISLLFLINQLVYRKKLS >gi|325480236|gb|AEXN01000036.1| GENE 14 12964 - 14154 1837 396 aa, chain - ## HITS:1 COG:FN1419 KEGG:ns NR:ns ## COG: FN1419 COG0626 # Protein_GI_number: 19704751 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Fusobacterium nucleatum # 3 396 2 395 395 513 62.0 1e-145 MTENNKRSFATQTIHAGAMKDKYGSLGLPVYQTSTFIFDSAEQGGRRFALEEEGFIYSRL GNPTNDALEKKLAALEGAEAAVSTASGMGAITSSIWPFIKAGDHILACGTLYGCTFAFLN EIQKFNIEVEFIDMTNLEEVKNHLKENTRIVYLETPANPTLDIIDIEEVVKLAKANSKDT MVIADNTFATPYLQNPLKLGVDIVVHSATKYLNGHGDVIAGFSCGSKELMTQVRLVGQKD FTGSVLSAHDAFLIFRGMKTLEVRMKQHIENAKKVVEALQKHKNVEKVYYPGLEDFKNHQ VAKKQMKDYGAMVTFEVKGGIESGRTIMNNVKLCSLAVSLGDAETLIEHPATMTHSTYTE QALKEAGIAPGLIRLSVGLEDSDDIIEDLNQALDLI >gi|325480236|gb|AEXN01000036.1| GENE 15 14241 - 15158 678 305 aa, chain + ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 292 1 292 301 157 29.0 2e-38 MNLNKISYAIEVSKTGSISKAAKNLYTSQPAISMAINDLEKELGFKIFKRSKSGTQTTVK GLEYLIKCQDLISKYKDIQRQYCPDKNDIPELRISSQHFNFTVSAFMKLIEKYKDSPFKF YLKETTSLHAINHVENDYSDLSFIYINKSYREAIFNLFKEKSLTYVSIAKVIPHVFINKD HPLAKKKLIKISDLYAYPMIIYEQDDTQVLPEEFVNLPDHKQIIYTQDRGTTLGLISNTN SFNVGTGCLHPNNGFSNIKTVKLENPENLSMDIGYVYKSSRNLSKLCKEYLDLTKLELFH CLPKL >gi|325480236|gb|AEXN01000036.1| GENE 16 15121 - 16515 1396 464 aa, chain - ## HITS:1 COG:FN1420 KEGG:ns NR:ns ## COG: FN1420 COG1757 # Protein_GI_number: 19704752 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 6 435 4 433 445 458 57.0 1e-129 MKENERISGKALIPFLVFIVVYLFTGIMLHLRGVEMAFYQLPAPIAAFVGIISAFILFSG SINDKFDNLIEGCGDSNIIIMCLIYILAGAFSTVASASGGVDSVVGLGLSFIPARFLTAG VFLIACFISIATGSSVGTITALGPIAIGLANSGGINLFLMLGALVGGSMFGDNLSVISDT TIAATRTQNCDMKDKFRMNIKLALPAGIITFILLLIFGAPESRPNQAALSYEIIKVIPYL FVLVVALMGVNVFLVLTGGIVLSGVVLLMNNGFNLLELSQTMWEGFTGMFEIFLLSMLIG GLSNMVTKEGGINWIISKIKKFAKGEKSGEFGIAALVSLADVAVANNTVAIIISGPIAKK MCNEYKVDPRRSASLLDTFSCVFQGVIPYAAQVLIAAGFTKGAVAPFQIIPYFWYQFILG IISIISIYVPFTSAKDKWNFEYDMPESKIADHIKVLEDNGKVQA >gi|325480236|gb|AEXN01000036.1| GENE 17 17026 - 18804 1199 592 aa, chain - ## HITS:1 COG:SPy0041 KEGG:ns NR:ns ## COG: SPy0041 COG1835 # Protein_GI_number: 15674283 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Streptococcus pyogenes M1 GAS # 1 591 1 591 591 273 29.0 9e-73 MRIKGLDYIRILGIFLVVAYHFFPNFIPGGFLGVNILFVLSGFLITYHLLREIYKNKEID IKKFYYKRFVRIFPPLLLMVFLTSLVCFFINKDYSVRFLDQFIAALSFNYNIFELVRGGS YEGGFVKQLFMPTWSLAIEVHFYLLWPLVLTLLINTFDKDRNFKEKFSSLLMKVCIFLYL LSYFLMVYLVKNYNNAIAFVYFFDFTRMGSFLMGAFAALFVGKIRKIPYKTLTALLSLAL IGLSFILSYSNELTYKFGFILADLFTVLMIIVSYSNKNIREYKFINKLSMYSYGIFLFHW PSFVICTSILDNYWGIILSIFVTGILTLVNFHLFEPLFKEKNASEKKKNPRISNAISQVF IGLVFISSIAMAYILNENAHNMVKIEKTIFEKSIKQDIDKMKMDKNLLDMAIKKAENKDY ADKKENVMINVLGDSVLLGNRDMLQENIKNLHVNAEGSRPIDSASDLIKQMKKDGNLGSV VVIALGTNAIKDPKESLEEIIRTVPKKTRLIFVTCYDNRYDQPHRVSVAMRKIAPKYDFI TLMDWEKEGMAHPEYYSGTDGVHFYGKLNAYDAYLKMLEKSIDQSLKAKAKK >gi|325480236|gb|AEXN01000036.1| GENE 18 18794 - 19180 307 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849175|ref|ZP_08170644.1| ## NR: gi|325849175|ref|ZP_08170644.1| MORN repeat protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] MORN repeat protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 128 1 128 128 216 100.0 5e-55 MEKKKFNGIFAYIVGTFMVLSFCYILFLLKPKKVSNYKPTKNITYKGQILKNKLNGKGKL ICPEGKYLGSFKDSRFDGKGKFVFDDFVYFAKFNKDKTNEDIKIKHSDGYTYKRVKKGWM RLEGKDEN >gi|325480236|gb|AEXN01000036.1| GENE 19 19326 - 20453 1615 375 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849167|ref|ZP_08170636.1| ## NR: gi|325849167|ref|ZP_08170636.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 375 1 375 375 557 100.0 1e-157 MKKKNVLALALAAGLVFGGTAYAAGAQNSDLNSAEDPFNHGIGKKVEDKLPKENKTAPEV EAKTNKDPLTKAEAPFGKEGEINKPNYTSAEAPFAGKEKTNGFNDAEAPFQNRDDDVKLN KAEDPFGSTKVKKEAPTTAYENVKHSFKTVQEAIAAYPDSKPMFVDGKYVVYSDKAPLVG YQFDSAQKAAEVFPNLKVEAKNGKYYVYTAQAPLLKYTFNTQAEAFDAFQDLKPMYENGK YIIYTQEAPKATYEFKSYEDAIKAFPGSNPEARDGKYYVHTTMDPVEGTVAKKVVGNPDK LVKVNPETGEIIGEEAQKPADKKADKKADKKVVSENKTERKANKANNVQTGVAGLTGVVA TLAAASTALFKSKRK >gi|325480236|gb|AEXN01000036.1| GENE 20 20898 - 22268 1451 456 aa, chain - ## HITS:1 COG:FN1420 KEGG:ns NR:ns ## COG: FN1420 COG1757 # Protein_GI_number: 19704752 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Fusobacterium nucleatum # 6 430 4 428 445 451 56.0 1e-126 MKKNEKISAKALIPFLVFIIIYLSTGIILQLRGVEMAFYQLPAPIAVFIGIISAFLLFSG SVDEKFDNLVEGCGDSNIIIMCLIYLLAGAFSAIASKSGGVDSVVGLGLSFIPGKFLTAG VFLISCFISIATGTSIGTITALGPIAVGLSESGGINLSLMLGALVGGSMFGDNLSVISDT TIAATRSQNCQMKDKFRMNIKMALPAGLITLILLLIFGAPESEPSQKDLSYELIKIIPYI FVLISALVGLNVFLVLTGGILFSGIILLFDNGFDFLSLSQTMWEGFTGMFEIFLLSMLIG GLSNMVNKEGGINWIIGKIKKIAKGEKSGQVGIALLVSLADIAVANNTVAIIISGPIAKK MCGEYKIDPRRSASMLDSFSCVFQGIIPYAAQVLIAASFSQGKLAPFQLIPYFWYQFILG LVAIISIYIPFTRPKDKWNFELDMAESEVKKHLKNK >gi|325480236|gb|AEXN01000036.1| GENE 21 22459 - 23412 1292 317 aa, chain + ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 1 316 52 335 347 245 42.0 1e-64 MKIKNVTVAGGGVLGAQIAYITAFHGYNVTLWGRSEGSIERIKPRIERLHNIFSKELDLA PSYIGEENPDYPRSFFKDKSEITQEKIEELKKINDKIYKDLKYTTDLDEAFSNADLVIEA IAEIVDEKKAFYEKISTHLKEDTIVVSNSSTLIPSQFREYTKREDKFLNLHFANNIWRQN VAEVMKHDKTSDESFESVIEFAKSIGMYPAILKKEQAGYILNSLLVPLLDSALMLYGDDI AEPKDIDMDWKIGTGAPKGPFEIIDIVGITTVINITKASPKAQDPNSALAKAVKKLEERA EKGLKGVESGEGFYKYK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:16:02 2011 Seq name: gi|325480204|gb|AEXN01000037.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00004, whole genome shotgun sequence Length of sequence - 28615 bp Number of predicted genes - 31, with homology - 31 Number of transcription units - 17, operones - 5 average op.length - 3.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 136 - 211 79.1 # Thr GGT 0 0 - Term 424 - 468 4.8 1 1 Tu 1 . - CDS 474 - 1739 945 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 1830 - 1889 10.6 - Term 1835 - 1870 3.5 2 2 Tu 1 . - CDS 1891 - 2067 460 ## Apre_1124 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein - Prom 2090 - 2149 11.5 3 3 Op 1 . - CDS 2171 - 2989 912 ## COG1774 Uncharacterized homolog of PSP1 4 3 Op 2 . - CDS 2961 - 3134 143 ## gi|325849209|ref|ZP_08170660.1| hypothetical protein HMPREF9246_0040 5 3 Op 3 2/0.000 - CDS 3131 - 3787 344 ## COG0470 ATPase involved in DNA replication 6 3 Op 4 4/0.000 - CDS 3789 - 4118 527 ## COG3870 Uncharacterized protein conserved in bacteria 7 3 Op 5 . - CDS 4115 - 4744 654 ## COG0125 Thymidylate kinase - Prom 4765 - 4824 10.2 - Term 4789 - 4836 5.4 8 4 Tu 1 . - CDS 4840 - 5484 752 ## PROTEIN SUPPORTED gi|228002700|ref|ZP_04049694.1| LSU ribosomal protein L25P - Prom 5537 - 5596 9.9 + Prom 5510 - 5569 8.6 9 5 Tu 1 . + CDS 5639 - 6151 800 ## COG2077 Peroxiredoxin - Term 6215 - 6243 -0.0 10 6 Op 1 . - CDS 6252 - 6878 655 ## COG2348 Uncharacterized protein involved in methicillin resistance 11 6 Op 2 . - CDS 6897 - 8108 958 ## COG3919 Predicted ATP-grasp enzyme 12 6 Op 3 . - CDS 8182 - 8976 692 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase - Term 8981 - 9007 -1.0 13 6 Op 4 . - CDS 9025 - 9624 839 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 9840 - 9899 6.4 14 7 Tu 1 . - CDS 10466 - 10765 498 ## gi|256545298|ref|ZP_05472662.1| N-acetylmuramoyl-L-alanine amidase - Prom 10896 - 10955 21.8 15 8 Op 1 9/0.000 - CDS 11419 - 12186 884 ## COG0327 Uncharacterized conserved protein 16 8 Op 2 5/0.000 - CDS 12176 - 12859 720 ## COG2384 Predicted SAM-dependent methyltransferase 17 8 Op 3 31/0.000 - CDS 12860 - 14698 2381 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 18 8 Op 4 . - CDS 14724 - 16385 1623 ## COG0358 DNA primase (bacterial type) - Prom 16405 - 16464 11.1 19 9 Tu 1 . - CDS 16480 - 17853 1346 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 17878 - 17937 2.7 - Term 17892 - 17931 8.4 20 10 Op 1 19/0.000 - CDS 17941 - 19776 2560 ## COG1299 Phosphotransferase system, fructose-specific IIC component 21 10 Op 2 10/0.000 - CDS 19800 - 20714 1106 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 22 10 Op 3 . - CDS 20711 - 21400 668 ## COG1349 Transcriptional regulators of sugar metabolism - Prom 21503 - 21562 11.4 + Prom 21321 - 21380 11.1 23 11 Tu 1 . + CDS 21512 - 21853 497 ## COG1950 Predicted membrane protein + Term 21854 - 21888 0.2 - Term 21842 - 21876 0.2 24 12 Tu 1 . - CDS 21877 - 22149 477 ## COG1254 Acylphosphatases - Prom 22174 - 22233 9.7 + Prom 22163 - 22222 11.1 25 13 Op 1 4/0.000 + CDS 22261 - 24798 3291 ## COG2217 Cation transport ATPase 26 13 Op 2 . + CDS 24798 - 25070 273 ## COG1937 Uncharacterized protein conserved in bacteria 27 13 Op 3 . + CDS 25143 - 25562 742 ## COG1302 Uncharacterized protein conserved in bacteria + Term 25576 - 25605 -0.3 - Term 25557 - 25601 2.1 28 14 Tu 1 . - CDS 25604 - 26104 523 ## COG4708 Predicted membrane protein - Prom 26150 - 26209 8.0 + Prom 26198 - 26257 10.7 29 15 Tu 1 . + CDS 26277 - 27170 910 ## Apre_0991 hypothetical protein + Term 27249 - 27315 30.0 + TRNA 27227 - 27302 94.5 # Lys CTT 0 0 + Prom 27229 - 27288 80.0 30 16 Tu 1 . + CDS 27485 - 28195 764 ## COG4684 Predicted membrane protein + Term 28201 - 28238 6.3 - Term 28188 - 28226 6.5 31 17 Tu 1 . - CDS 28236 - 28541 493 ## HMPREF9243_1782 hypothetical protein Predicted protein(s) >gi|325480204|gb|AEXN01000037.1| GENE 1 474 - 1739 945 421 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 5 410 2 418 447 368 46 1e-101 MKNSKKIYHVEDKLPFKLLLPLSIQHTFAMFGASVLVPILFKINPGIVLFMNGIGTLLFI LFTKKKAPAYLGSSFAFLAPGTAIIASQGFQYAQGAFIVVGLIGCLLAYIIYKFGIGWID VVLPPAAMGAVVALIGFELAGNTVTGGSIGANLMTDSANYKDYIVFAITLFTAIIGSVAF KGFFSTIPILIAIVVGYISAIFFDMVDFTPVLQAKLFTLPNFSAPKFSIEAILSMLPVIL VITSEHISHQVVTSNIIGRNLLEDPGLHRSIFADNFSSALSGLVGGVPTTTYGENIGVMA ITGVYSVQVIGMAAVISIIMAFFGPLAALIQTIPGDVIGGVTFLLYGMIGTSGIRLLVDQ KVDYSKSINLILTSVIFIAGLSGLSVKFGSIQLQGMVLASVVAVLLSAFMTLLKKLNLIN Q >gi|325480204|gb|AEXN01000037.1| GENE 2 1891 - 2067 460 58 aa, chain - ## HITS:1 COG:no KEGG:Apre_1124 NR:ns ## KEGG: Apre_1124 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 54 1 54 57 66 94.0 4e-10 MAYRIDENTCISCGSCEGECPVQAIEQGDAAYEIDEDACIDCGSCAAVCPVEAISPAE >gi|325480204|gb|AEXN01000037.1| GENE 3 2171 - 2989 912 272 aa, chain - ## HITS:1 COG:CAC0301 KEGG:ns NR:ns ## COG: CAC0301 COG1774 # Protein_GI_number: 15893593 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Clostridium acetobutylicum # 1 271 1 272 303 245 48.0 6e-65 MLKVVGVSFKKAGKIYYFNPLDFNLQIDDKVIVNSNSCIEIGTVKTPIKEISEDEFDREL SPIIRIANKNDLKEDEKNKIDAKEAVKICQEKADKLGLNLHAIEAEFTFDRKKLMIYFSS NNRVDFRKLVKELAAIYRNRIELRQIGVRDHAKLVASVGLCGQKCCCARFLDDFKPLSIK MAKEQDITLDPNKISGLCGRLMCCLSYENENYKIAKKAMPKVGQKVQTQDGIGVVVENNY VKEKCKIRVKIEEDDTEVEKSFCPKDIKQINS >gi|325480204|gb|AEXN01000037.1| GENE 4 2961 - 3134 143 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849209|ref|ZP_08170660.1| ## NR: gi|325849209|ref|ZP_08170660.1| hypothetical protein HMPREF9246_0040 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0040 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 57 1 57 57 92 100.0 7e-18 MKKIEKLPFDSIDRIIRKTEEITKGFKNNVNFDLAIENFVFFIYREGINVEGSRSKL >gi|325480204|gb|AEXN01000037.1| GENE 5 3131 - 3787 344 218 aa, chain - ## HITS:1 COG:SA0442 KEGG:ns NR:ns ## COG: SA0442 COG0470 # Protein_GI_number: 15926161 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Staphylococcus aureus N315 # 4 165 7 173 308 65 28.0 6e-11 MELLENQIKNKRLSSSYIFESKNSTYNLDRALEFSKKVFESYGLDTRLSENSDFEIIKKD EKEKNISIKTVRLLINDMYLRPSNGKIKIYIIDESERLSLEGSNALLKSIEEAKDYILII FTTNNSFSLLKTIRSRCQIISFKSEKENEFVDREELSYILSEIISGNLSFYYKNKDFFSK AKDYKEEFFIEISNFFNNLIKLKYYREISIENKKYYFT >gi|325480204|gb|AEXN01000037.1| GENE 6 3789 - 4118 527 109 aa, chain - ## HITS:1 COG:BH0043 KEGG:ns NR:ns ## COG: BH0043 COG3870 # Protein_GI_number: 15612606 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 1 106 1 106 109 112 52.0 2e-25 MKLLIAIVQDADANFLMDSLTEKRYRVTKLATTGGFLREGNTTLLIGIEEENLEEVKKII EDNCKKRTTQSSVINPTADSPLLATSAPVDVNVGGATIFILDVDQYIRI >gi|325480204|gb|AEXN01000037.1| GENE 7 4115 - 4744 654 209 aa, chain - ## HITS:1 COG:BS_tmk KEGG:ns NR:ns ## COG: BS_tmk COG0125 # Protein_GI_number: 16077096 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Bacillus subtilis # 1 207 1 209 212 187 46.0 1e-47 MNGLLIVFEGPDGSGKTTVLEKVYDKLLQDGYDIYKFREPGGTEISEKIREIILDNDNIK MSARCEALLYAASRAQLIEEKLRPLLEKGSIILCDRFVLSSMLYQGIGRGLGIDEVKKIN DFAIGEIKADLTLFLNIDYKTAIDRKRKNFVSDRLENEDDSFHKKTYEGYIDLSKRFKDE IISIDANKSLDIVVDNCIDTIKTYIKEKK >gi|325480204|gb|AEXN01000037.1| GENE 8 4840 - 5484 752 214 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002700|ref|ZP_04049694.1| LSU ribosomal protein L25P [Anaerococcus prevotii DSM 20548] # 1 214 1 215 217 294 69 5e-79 MADIVLKSEKREAVGKNQVNKLRQQAIVPGVVYGKDKENINVQFTSRDFDKVLSQAGTST IIDLDLDGEKVPVLIKDYQMHPFKSQFFHVDFQAINAKEAIRVTVPVYLSGRDDIRVEPS VLVQNIDTVDVECLPMYIPQYAEVVVTEMQIGDAFIVADLDIAKDENINILLEDDEVVCS LQEPQEEVVVEEEDSESASDVPTVDETEEKEDEE >gi|325480204|gb|AEXN01000037.1| GENE 9 5639 - 6151 800 170 aa, chain + ## HITS:1 COG:BS_ytgI KEGG:ns NR:ns ## COG: BS_ytgI COG2077 # Protein_GI_number: 16080001 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus subtilis # 13 170 11 166 167 153 48.0 1e-37 MTERKKKFGEEEITVIGEELKVGDTAPNFKAINNDLSEYDFYKEEEGKIKILSVVPSLDT SVCEIQTTKFNKAAADISPDVSIVTISNDLPFAQSRFCSAKGIDQVKTVSDYNYLDFADK YATLIKELKLQNRSVFVVDKDNKLVHVEYLEQNTELPDYEAALEAAKKLV >gi|325480204|gb|AEXN01000037.1| GENE 10 6252 - 6878 655 208 aa, chain - ## HITS:1 COG:BB0586 KEGG:ns NR:ns ## COG: BB0586 COG2348 # Protein_GI_number: 15594931 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Borrelia burgdorferi # 17 179 135 306 347 66 33.0 3e-11 MGYDFRSVCDPIHSFTQPRYNMIIDLSLGDEEKIFENFSSKGRYNIRKSIKAGIETKIET NEKTLDDFYQLTEIMVKRQGITYRPKEYHKRLVENYGCKIFSSYYEGEVLCSSIVVPYKD SLTYLYAASSNEKRNKMPNYNMLWEEIKYGVKNVYKSLDLGGVFSLDKKDGLYRYKEHFC HPNKYTAYIGELDVVYDRDLYEKFLITK >gi|325480204|gb|AEXN01000037.1| GENE 11 6897 - 8108 958 403 aa, chain - ## HITS:1 COG:L93420 KEGG:ns NR:ns ## COG: L93420 COG3919 # Protein_GI_number: 15674209 # Func_class: R General function prediction only # Function: Predicted ATP-grasp enzyme # Organism: Lactococcus lactis # 3 395 6 405 408 299 43.0 6e-81 MKKFKIVILGTDLNAYGLARSAHELYGIKSVCMGVRPLRDTRDSKICEVHIKENFEEDDI FVDELIKIKQKYLDYQLILIPCSDEYTSLIVNNKDKLKDYFLINCVDKYMQEKLENKKDF YEICEKYNLAYPDTVIIEGKSDKDIKKVEDKLSYPLALKANDSINYYNTYFEDKRKAYKI YNKDELIKTLDKIYKAGYCGEMIVQDFIPGDSSNMVVLNAYVDSKSKVRMMSLGKCLLDE VLPLNIGNYNALATFGNDKIYKQYKKFLEEISYKGFANFDLKYDERDGKYKVFEINIRQG RSSFYMNSTSNNFLKYIVDDLIFKRYEECYFEHERGLWLYVDPLVLKKYVNKKDKELALK LLKKGYVFTIWYDKDKNFKRYLHYMRRRISTLKYYPKYFNKNL >gi|325480204|gb|AEXN01000037.1| GENE 12 8182 - 8976 692 264 aa, chain - ## HITS:1 COG:FN1488 KEGG:ns NR:ns ## COG: FN1488 COG0190 # Protein_GI_number: 19704820 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Fusobacterium nucleatum # 6 261 9 273 283 125 31.0 8e-29 MKIINSKDIKNKLIKKINTAKKNKKLLIISQGKNPSVLSYKNAILKRCKEYGINYLDKNF GDDKNHFDFIDYCENLENIDGFIILQPLSKNTDLDYLRKNMSFGDLDGFRYDSLGKIMDK NFENLPQTARSIIKFIEYMNIDLKGKDIIIANSTNVIGKPLSMYLNYKKATVTLFNSKTI NQKEKIKRADIFISAIGKANFYNSDYFRDGQILIDAGTSFVDGKMYGDIDYDSLENLNID IVTCKNGVGSITTLSLIESLLFDS >gi|325480204|gb|AEXN01000037.1| GENE 13 9025 - 9624 839 199 aa, chain - ## HITS:1 COG:CAC0309_2 KEGG:ns NR:ns ## COG: CAC0309_2 COG0791 # Protein_GI_number: 15893601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 33 198 10 169 171 91 37.0 7e-19 MGDKVSGQLANGWLKVNYNGQTGYISADLLSNSEVAKPQEVVQNYSNNQERSQQNNTVTA QKTVAQTQQQAPAPQASGSGQAAANIASQFIGTPYVWGGTSPSGFDCSGLVQYAYRQVGV NISRTSQQQATNGYSVSLSSLQAGDILLFSYGGSVDHVGIVTDSSGNFVHASNPSTGVIT GNVYDPWYQSVCVGARRIF >gi|325480204|gb|AEXN01000037.1| GENE 14 10466 - 10765 498 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|256545298|ref|ZP_05472662.1| ## NR: gi|256545298|ref|ZP_05472662.1| N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC 51170] N-acetylmuramoyl-L-alanine amidase [Anaerococcus vaginalis ATCC 51170] # 1 99 1 95 542 127 81.0 2e-28 MSKKNIGSTIGVLAAVTIGATAYASTINNLDKEDQSKKVLDSNVSYIDKEYASTAKKVKK DYADEVSNTKFAEKSNDKKDNKKDAKLSKSRNLADPTLF >gi|325480204|gb|AEXN01000037.1| GENE 15 11419 - 12186 884 255 aa, chain - ## HITS:1 COG:SPy0931 KEGG:ns NR:ns ## COG: SPy0931 COG0327 # Protein_GI_number: 15674951 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 1 219 1 222 262 153 39.0 4e-37 MKIKEVIKFLEDKFPLDLQEEWDNSGLQIGNVENDLKNIMISLDLTDEAIESAIENSCNL IINHHPFIFSPIKSIDLSDAYNKKIEKLIKNDISVFAMHTNLDTAKGGVNDNFAKVLELE RVEFLDTKNDHPMARLGYTKEQNAKEFAEFVKEKLACKGLILYGDKEKIIKKVALCGGAG SDFIKDAIEKKCDVIVTSDVKYHEAIDNSKDIVIIDPGHFASENHIIYMLEKLLDNHFAT RIYTNTPKKAYRFFI >gi|325480204|gb|AEXN01000037.1| GENE 16 12176 - 12859 720 227 aa, chain - ## HITS:1 COG:CAC1302 KEGG:ns NR:ns ## COG: CAC1302 COG2384 # Protein_GI_number: 15894584 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Clostridium acetobutylicum # 1 203 1 205 229 85 32.0 6e-17 MKITKRLEKIANLVEEGKSVIDIGTDHGLVPLYLAKNNISKDILATDISAKSLKKLEDKI DKNLENTIRTKVCDGLDNIGIKENQIAVIAGMGAITIIEILTKNIEKVRKLDYVICEGNI GNEKLRKFLNENNFYIDKDFLIKDGRKHYDIIRFRNGKDRKLSLGEIYFGKFIYHEKNPL VMKRIDQIYKKNIRFKENIEKYSKDKEGLDLINERLEAIREVRNHEN >gi|325480204|gb|AEXN01000037.1| GENE 17 12860 - 14698 2381 612 aa, chain - ## HITS:1 COG:lin1491 KEGG:ns NR:ns ## COG: lin1491 COG0568 # Protein_GI_number: 16800559 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Listeria innocua # 376 612 137 373 374 333 77.0 6e-91 MTSDNEKMLEDDLLKEIIDEFKSISESQDGIVTYKQVYTFETFKEMEDESKKYVIGQIIS NGIEIVEEERTVLDEEDDDEIIDDIDDEDEDFSDEKLEDHMKKVSKKQKVERKIVQEETI TGIKLDDPVKMYLKEIGKVKLLDAHEEIFLAKKMELGDIALRSKNGRKLTKQNKMKLALD IFYGDISITILRANKMILENKEIDEEIQTNLNSLIEIGNQFENMLNQELTDEQLEAIKSK ILICNIAQKSISDKELSEKEANILCDLFDNFGKLVSSEESDDIVSLIYLAFSDLYKKGAE DEIFKTNDRLLINDLMNFANKAKQVSEKRPLSESSIKDLERFEKTKELCKKIFEDQGFDA DDVKRLNRAIFDANRAKQKLAETNLRLVVSIAKKYVGRGMSFLDLIQEGNMGLMKAVDKY DYNRGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLVQDLGRDPS NEEIAEQMGIEVEKVQEIRKIAQEPVSLETPIGEEEDSHLGDFIEDDTAINPDDAANYSM LRDQLNDVLSCLGAREKRVLQLRFGLIDGTPRTLEEVGKEFDVTRERIRQIEAKALRKLK SPNKSELLKDFL >gi|325480204|gb|AEXN01000037.1| GENE 18 14724 - 16385 1623 553 aa, chain - ## HITS:1 COG:CAC1299 KEGG:ns NR:ns ## COG: CAC1299 COG0358 # Protein_GI_number: 15894581 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Clostridium acetobutylicum # 2 472 4 476 596 302 38.0 1e-81 MVFISDDKKNEILENSDIVAIIGDYVDLKKSGNSYKGLCPFHNEKTPSFTVDDKKQLFHC FGCGEGGDVVSFIMHKEGLSYIDSMKYLASKAGIKIDDSKSSRENKRLNRLYDINKDIMM YFYKNLLTDKAGQIYLKNRGFRSNIVNTFMLGFAKNSWDDLLSYVKEKDYLLDDIENLGL IKKSQNGKYYDKYRNRLIFPIINHYGKVIGFGGRSIDSTMPKYLNSPESEVFKKRYNLYG LNIFKKQSNKDIILVEGYMDVIGLNNQGIDQAVASLGTSLTNDQAKLLKRYAKNVFICYD EDNAGIKATDRAIEILLDEGIKPNIISLEKGLDPDDFVKKYGRDAFIKKMDEASDVYNYK YNKILDIYASSKENEKFEKLNLFIEFLASIKSDLTREIFVNNVSKLFDIDKSTLKESVLK YNDNYKKTFNKKFSDESSFKKNNKNQSVLVERKKYSVSINELETLRLYLNQRDDYKEFED FFDQVLVDENILKIKAYIEKNGMEKISENFTNEDQFIIDYIKDKSNKIVANELKDKINLE NRRKLLKKLRNRD >gi|325480204|gb|AEXN01000037.1| GENE 19 16480 - 17853 1346 457 aa, chain - ## HITS:1 COG:slr0091 KEGG:ns NR:ns ## COG: slr0091 COG1012 # Protein_GI_number: 16331766 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Synechocystis # 1 456 1 455 456 408 44.0 1e-113 MSELKKVIDEQNIFFRTGRTNTEDFRKKALIKLKNSIKKYREDILYALKMDLNKSTTESH ISEIANVYGEIDFALKNLSDWMKDTREITNIEAAPAKSFTRYEPLGLTLVISPWNYPFLL AIDPIVNAISSGNTIVLKTSRKAVYTSKIIKKLLDENFDRSFIYCIDNEKVSHDELLSYK YDHIFFTGSAKVGREIMEKASKNLTKVTLELGGKSPCIVDESANLKFAAKRIIWGKLLNS GQTCVAPDYLLVHKDVKDKLLRLMKEMIFEFFGDRAIDNPDYPRIIDKKALDRLVSLMEG QDIYTGGLYNSKTLKIEPTIINNVDFSNKIMKEEIFGPILPVIEYNDIFEVINKLKFMDK PLAMYIFSEDQDHIDRLTYDLSSGGVCINDTIMHLSNPNLEFGGVGESGSGGYHGKFGFM NFSNRKSIMIRSNNIDVNIKYPPYSRGQEKIIKKIFK >gi|325480204|gb|AEXN01000037.1| GENE 20 17941 - 19776 2560 611 aa, chain - ## HITS:1 COG:FN1441_3 KEGG:ns NR:ns ## COG: FN1441_3 COG1299 # Protein_GI_number: 19704773 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Fusobacterium nucleatum # 283 610 1 327 328 372 61.0 1e-102 MIMELKSSNKMDVIDEIAQKFFDEGIVGSKEEFKEGLIKRESETSTALGEGIAMPHAKVD TVKEPAVLFAKKAEGLDYEALDGEDSFVFFSIAVPNGENNLHVQTLAKLSKMILKEGFID KLKAANSPDEVYEIIDSYSEEEKEVSKPVEENESSKYIIGVTACPNGVAHTYMAQEALEN AGKKLNAKIKIETNGSDGVKNRLTSEDIKNADAVIIAADKKVEMARFDGKKLIQRPVSDG IRKSEELVKDAIDGKFSVYHASGSDSKVEEVSTEKTSLKQEIYKDLMNGVSHMLPFVIGG GILMAISFLAERFLGDKSLAFTFLNKIGSGAFSFLIPILAGYIAYSIGDRPALMPGMVAG FLASESAGFLGGLIGGFLAGLIINFLKKICEKMPKSLNSVKSMLIYPVFGLLITGALMFF IIDPVFTGINDGLNNWLTNMGATNKVLIGALLGGMMAADMGGPINKAAYTFATGAFIGTN DGAFMAAVMAGGMVPPIAIALASTFFKDKFTENERKSAVSNYLLGLSFITEGAIPFAAAK PQLIIPISIVGSAIAGGLTQLFNVSVPAPHGGIFVLPAMSSLNQALFFIGSFVIGSIVSA ILLGIFKKKEI >gi|325480204|gb|AEXN01000037.1| GENE 21 19800 - 20714 1106 304 aa, chain - ## HITS:1 COG:FN1440 KEGG:ns NR:ns ## COG: FN1440 COG1105 # Protein_GI_number: 19704772 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Fusobacterium nucleatum # 1 302 6 309 314 275 46.0 5e-74 MIYTLTLNPSIDYVLRIERFDDGQTIRSKSEEKYPGGKGIMVSKLLKNLGAKSINIGFLG GFTGEFIKNKLENLGIDQEFTKISDDSRINVKLKYDTETEINAQGPQIKEEEIEEFLNYL DNLNEDDFVVISGSIPKSLGDDFYRVIVNLLEMNNVRFALDTSGKKLFNLSAYRPFLVKP NKDELGEIFEDSIDSDEKIIKYARKLIDQGAENVIVSLGKDGSIFVDNNMAYKAKPIEGK LINSVGSGDSMVAGYIYGYMRGLSKIDSYKLAIACGSATAFSPDIAEKNLIYQILEKVEV EECK >gi|325480204|gb|AEXN01000037.1| GENE 22 20711 - 21400 668 229 aa, chain - ## HITS:1 COG:FN1439 KEGG:ns NR:ns ## COG: FN1439 COG1349 # Protein_GI_number: 19704771 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Fusobacterium nucleatum # 1 228 1 228 245 173 46.0 2e-43 MIFEKRIEIILNILKKQRQVSNKILKSNLNVSESTLRRDLDYLEKRGYIKRVHGGAVLSN IEFEEKSYDKNVVSCIESKIKIAKKASKEIFDSKYIYLDGGTTINQLIDYLPKDCTVITN GIMHLEKLGKNNIKTIFLGGNIKTRTNVVVGEQSLDNLLKYNFDLCFIGANGYCNGEFTT HDPNEAIIKNTAIKRSKRSIILLDKSKFGKVYFSKICNIEDVDLITEEL >gi|325480204|gb|AEXN01000037.1| GENE 23 21512 - 21853 497 113 aa, chain + ## HITS:1 COG:MT1954 KEGG:ns NR:ns ## COG: MT1954 COG1950 # Protein_GI_number: 15841374 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 3 103 37 150 167 60 35.0 9e-10 MKLLIQCLVNAISLYILDLLFSGISFTENKAFIITAILLILVNAIIKPILKLLSLPLTII TFGLFSFIVNAIVLEITFNLSSGASIDSFSTAIFASIILAIINPLIENIFKKD >gi|325480204|gb|AEXN01000037.1| GENE 24 21877 - 22149 477 90 aa, chain - ## HITS:1 COG:PAB7421 KEGG:ns NR:ns ## COG: PAB7421 COG1254 # Protein_GI_number: 14521859 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Pyrococcus abyssi # 3 82 5 85 91 58 40.0 4e-09 MKRYNMIFKGRVQGVGFRYKSFMIANELGLTGDVYNLYDGDVEVNVQGEQEKIDIFLDGL SHDRFIRIDKVNIKEEEIKNDEKNLNYHKK >gi|325480204|gb|AEXN01000037.1| GENE 25 22261 - 24798 3291 845 aa, chain + ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 7 748 78 816 818 657 50.0 0 MKERFKVTGMTCASCQANVQKAVEKLGVNSVNVNLVSETMNVSYDENEISKDDIIDAVEK IGYGASPVNEKKSEDSSKNNSEEKNVKNRLIISFLFMIPLMYVSMGHMVNLPLPHFLHGV EGSVNFAFVQFLLTIPVIFVNRIFYISGLKGLINKAPNMDTLVGLGSFAAVVYGIFAIFR MAYGLGFSKLDIVEMYRTNLYFESSAMILTLITLGKYFEKRSKGQTKKSLEALMDLAPKK ARILLDGMEKEIPVEDLKKGDLIIVRPGESIAVDGIIKEGSSLVDESAITGESMPVNKNV GDEVISATINKQGSFVFEALKVGEDTTLSKIIELVNEANESKAPIAKLADKISAVFVPAV MLISLITFITWMLLGYGFEFSLNLAISVLVISCPCALGLATPMAIMVATGKSAEYGLLFK NAESLENLHKVDTILLDKTGTITEGKPQVTDILTDLDENEFLKLASSMEIKSEHPLSNAI NEFAEEKNIQNIEVSNFESISGKGIKASYKNKIYYGGNISLMKEKNIDLKSYEKKSDILS SQGKTSMYFSNEKEVIGIIAVQDRPKSLSKIAIDEMKKLGYEVRMITGDNEKTAEAIRKS LNIDYKYAEVLPEDKEKEVKKLKNQGKKVLMVGDGINDAPALARSDVAMAIGNGTDVAIE SADVILIKNNILDIVSAIKLSKATIKTIKENLFWAFFYNVIGIPLAAGLLYPSFGIKLSP MFGAFAMSLSSVFVCLNSLRLRNFKANFENDKKIKEIIENDNNKIKKENKMKELNKMIVK VNNMSCNHCKNRVEETLKSIAGIENAEVNLDEKLANVEFFGSIDEKEIADKINDAGYEFV GIEYK >gi|325480204|gb|AEXN01000037.1| GENE 26 24798 - 25070 273 90 aa, chain + ## HITS:1 COG:CAC3656 KEGG:ns NR:ns ## COG: CAC3656 COG1937 # Protein_GI_number: 15896889 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 89 1 86 88 71 46.0 4e-13 MKADKDKTLRKLKTVKGQIDGLIKMVESDRYCIDISNQLMASISILKNVNTDVLSSHLEH CVYHAVENGSKDDGIEKIEEIEQIIKKLSK >gi|325480204|gb|AEXN01000037.1| GENE 27 25143 - 25562 742 139 aa, chain + ## HITS:1 COG:SA1984 KEGG:ns NR:ns ## COG: SA1984 COG1302 # Protein_GI_number: 15927762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 18 132 40 154 169 57 33.0 1e-08 MDKIENKDVQAEYANEVSEYTINDNVIAKIAKKVLVKTDGVLELKKNVFSSIADNFTDGE NTSGISIDVDDAKNAVVNTKIILEYGKKAQEVFASLDRNIKKEVNSLTGIKVQAVKAEIV DVLTKEEFKEKNSKDEEEK >gi|325480204|gb|AEXN01000037.1| GENE 28 25604 - 26104 523 166 aa, chain - ## HITS:1 COG:CAC2413 KEGG:ns NR:ns ## COG: CAC2413 COG4708 # Protein_GI_number: 15895679 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 14 156 10 156 166 65 34.0 3e-11 MSDQRYNFKDTNFLVKSAVVAALYAVITLMLPSLAYGPIQLRLSEIMVLLVFYNRRFIPG LLLGCFLANFASDIAVFDVIFGTFASFLAFSLIIRQKNLFIASLFPVLFMFIPAIGTYLL LDSSTAFIIMLVQFMISEFIVVSVIGFIIFKILERNTGFMNIIKNF >gi|325480204|gb|AEXN01000037.1| GENE 29 26277 - 27170 910 297 aa, chain + ## HITS:1 COG:no KEGG:Apre_0991 NR:ns ## KEGG: Apre_0991 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 53 296 53 295 295 242 50.0 1e-62 MKKIILTLIFIFTLSSCGKDESQIKNEDFSNTLRDVEKITQKHIKVDQDAKANMVSIMND KNNYQAKIRTTDENELKSYISENIHKNKKLEWALKNFDKLNHIEKVLIGNDIDTVNFIYN LNHGKTNFNFFEGQSINLGRKTPYYVQWDDRWAYDKIIESETIGISGCGPTSMSMVLSRL LDDKNINPRIIAQDAKNYITHEGIAWSFFKAESDKYGINVKEIKNDEKEIKNALKKGPLV VSVRHGYFTNSGHIMVIDSYEDGKLLINDPNSIKNTKIKWPYEDIKDQIANVWAFSK >gi|325480204|gb|AEXN01000037.1| GENE 30 27485 - 28195 764 236 aa, chain + ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 127 12 138 192 87 44.0 2e-17 MVTVAMLGAITIVLGLTPMGYIPLGLINITTMHIPVIIAAILEGPLVGGLVGFIFGLSSI ANAMLRPGPISFVFYNPIVSVLPRILIGIFAGLTFKGLKDKNNEKIRKISLILWTILTGF LIYLVFYNFTNNAKVYQIVLSIIITIIAISMLFLTYKNKNSNLSVSIASFVGTMTNTLFV MGFIYLFYAEKYVKALGISVDAARSTIFGAIITNGLPEAIMSIVLVSAIVRAVRRK >gi|325480204|gb|AEXN01000037.1| GENE 31 28236 - 28541 493 101 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1782 NR:ns ## KEGG: HMPREF9243_1782 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 6 100 6 100 101 78 44.0 9e-14 MVDIKKVKEMEEILNKNSKAVEEFRKALEKFKKSQKDFKKLSDYYSSQEYMDDLDQSNQG KIDPEISQGIFSEDLVYDLLGDNYYLAVDMLELATKIIKNN Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:16:29 2011 Seq name: gi|325480194|gb|AEXN01000038.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00068, whole genome shotgun sequence Length of sequence - 11961 bp Number of predicted genes - 9, with homology - 9 Number of transcription units - 3, operones - 3 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 98 - 136 4.1 1 1 Op 1 . - CDS 184 - 639 616 ## COG1225 Peroxiredoxin 2 1 Op 2 . - CDS 651 - 1025 571 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 1055 - 1114 9.9 3 2 Op 1 . - CDS 1128 - 2228 1121 ## Apre_1333 tetratricopeptide TPR_2 repeat-containing protein 4 2 Op 2 . - CDS 2230 - 2808 465 ## Apre_1334 hypothetical protein - Prom 2862 - 2921 9.4 5 3 Op 1 . - CDS 2931 - 4637 1836 ## COG0018 Arginyl-tRNA synthetase 6 3 Op 2 2/0.000 - CDS 4652 - 6997 2711 ## COG1193 Mismatch repair ATPase (MutS family) 7 3 Op 3 . - CDS 6997 - 9213 2243 ## COG0826 Collagenase and related proteases 8 3 Op 4 . - CDS 9213 - 9737 657 ## Apre_1338 hypothetical protein 9 3 Op 5 . - CDS 9746 - 11959 2534 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit Predicted protein(s) >gi|325480194|gb|AEXN01000038.1| GENE 1 184 - 639 616 151 aa, chain - ## HITS:1 COG:MA0616 KEGG:ns NR:ns ## COG: MA0616 COG1225 # Protein_GI_number: 20089505 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Methanosarcina acetivorans str.C2A # 4 151 5 151 153 148 52.0 4e-36 MSIIKKGEKAPLFNIKDQNAEDVNLENYRGKKVILSSHPLAFTSVCADQMRSLERNYDRI QEKGETVVIGLSIDPQPSKKAWAAVLNIDNVKFASDFFPLGEVAKAYGIFNEENSASKRA NIIIDEEGIVKWSKEYPQAQLPDIEEVIENL >gi|325480194|gb|AEXN01000038.1| GENE 2 651 - 1025 571 124 aa, chain - ## HITS:1 COG:BS_yabJ KEGG:ns NR:ns ## COG: BS_yabJ COG0251 # Protein_GI_number: 16077116 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Bacillus subtilis # 2 122 3 122 125 139 56.0 9e-34 MKIIQTKKAPAAVGAYSQGIVTNGFVYSSGQLPLVPETGELISDDIKKATKQSLENVKAI IEEGGSSVEKIVKVNIFLDDVNDFAAVNEVYAEFFGDHKPARSCVEVGKLPKGGLLEIEA IAEL >gi|325480194|gb|AEXN01000038.1| GENE 3 1128 - 2228 1121 366 aa, chain - ## HITS:1 COG:no KEGG:Apre_1333 NR:ns ## KEGG: Apre_1333 # Name: not_defined # Def: tetratricopeptide TPR_2 repeat-containing protein # Organism: A.prevotii # Pathway: not_defined # 3 365 2 365 365 387 58.0 1e-106 MAKIDQYFLNFTDKLAYIDLKKESSYELLNKTPLALYAKDLSENVISGEFENKINLDMIL DGLIINLGIDKDFRYKESYIKIIENYIKNIGAYTSQKALKIIEKNPEKSLLLLRGGYIIN PFDKYNSYNYARVLWPKAYEDTEYKDEFIKEALRILQEIINQDQDFPLSYYELGNIYANL GEYIKARSYYENALQRTKDIQAQDEIRDKIKMIFDNAEIEEGLYYIGKGNFDRAIQILTR LLSKTKRADAYYYLAVAYQNVGQYENSNLAFKNSLDKGGEFRELYNDYAISLYATKKPID AIEIINQGLKKYPEDPRMTYNRLQINLSLNNIKKAKEDIENLESYDDLSDELRQNIQIIK DQYKLN >gi|325480194|gb|AEXN01000038.1| GENE 4 2230 - 2808 465 192 aa, chain - ## HITS:1 COG:no KEGG:Apre_1334 NR:ns ## KEGG: Apre_1334 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 15 192 56 233 233 132 43.0 1e-29 MKGLSVINSSYLSSLINYLIEILILCFVAQALRSIVLYNNTGKKSIENSISNFFYLIMSA MFSIYIVELIINNLLGGIDPTISYLVSIIFKFFTSAVIELVYIESVYGFTILIDSFNFVK NNIFIWGIYALIYTLVEAYLINKLVMNTLVIGNELIYVILLSLWDTIFLLFKGHLFKILS KHSYRQRKFMRG >gi|325480194|gb|AEXN01000038.1| GENE 5 2931 - 4637 1836 568 aa, chain - ## HITS:1 COG:CAC1041 KEGG:ns NR:ns ## COG: CAC1041 COG0018 # Protein_GI_number: 15894328 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 3 568 2 563 563 523 47.0 1e-148 MEDLKGLIAKKLEEKELGLDFQEIYDLIEIPPQDDMGDFSFPCFILAKKLRKNPAIIAKE LKEDLEKEDSPYFSKVDSLNAYLNFYIDRKYLQGQVLREIIKEKENYGRSDMGKGKNIVL DFSSVNIAKPFHIGHIRSTVIGDAIRNIHDFLGYNTIASNYIGDYGTQFGIMIAAYKLWG DDDKLNQNPIKELLNLYVRYNEQASSDQDMMNEARDEFRRLEEGEEEAVRLWSWFKEISF KEFDRVYKLLDINFDNYHGEAYQSKYIPDVLDQLKEKNLLTESDGAQIIDLSKYDLPPAI IIKSNGSSAYITRDIATAINRKKTYDFSENLYVVATQQNLHFQQLWAILELMGYDFYKDC KHIPFGMVSLKDQTLSTRKGQVVFLEDVLNKAIDKTKEIMKDRDSALENLDETAQIVGIG AVKFQELYNNRIKDYVFDWDNLLNFEGETGPYVQYSYARAKSVLKKGQIDNFDKVEFDLL NTDEEFNLIKSLAEFKESIVRAKEKYEPSIISRKVMDIAKNFNKFYNTSKIMVDDEKLKE QRLALAYATSIVIKNGLKLLGIKTVDQM >gi|325480194|gb|AEXN01000038.1| GENE 6 4652 - 6997 2711 781 aa, chain - ## HITS:1 COG:CAC2340 KEGG:ns NR:ns ## COG: CAC2340 COG1193 # Protein_GI_number: 15895607 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 1 781 1 788 788 501 40.0 1e-141 MQEKTLEVLEFEKILEKLQNYARSELVKKEILKIKPKNDIKEIKEELDKTKAMEKVIVEN GNIDIFGLYDLKEIIGYVRKNGILEPFELLKILDLLRVSNYLKEYGENIEDPYIKDIFDR ISTNDFIKDEIERSIISEDEIADNASANLRSIRKRMGKKEEEIKNKLSFYISSSKFDDSL QDKVVSIRDGRYVLPVKTNKKAVLNGIIHDRSQSGNTLFIEPNAIVELNNDLSNLQIEEG DEIRRILDRLSRFVQGFDQEILENQKLIQRIDFLQAKVKYFLAKEYTIPKLTDKKIINLK NARHPLLKGKVVPINVKIGDGYNTLIITGPNTGGKTVSLKTVGLISLMAQSAFYIPCDED SLVNVFDDIFLDIGDTQSIEMSLSTFSASLTNIVKITENITENSLVLLDEVGSGTDPTEG AALAISILEFLKNKNTMTFATTHYSELKYYALEKNGVMNASVEFDLETLSPTYKLIIGTP GKSNAFEISKRLGLNKEILKNAKSILSEDNKNFNTILEELDQNKKEMEIKNQEIEDYKKK IRKARNDLLSLSEKIKKEEKDIIKKAEEKANKILDQANESSQEMLKIAKKSKNANTSDID RSLNEIRNKYKSSKIEKDENILREKRSKNAPQNLKVGDLVMIEGLNEKAQVIENPDEKGN IKVQMGILKMDSNIKNVTKLKDENKTKENTNRIYKAKKAMHISPTLDLRGQRYDEALRNF DKYIDDAMLSGLDQAKIIHGKGTGALRNGINDYLKNNKMIDSYRPGNEKEGGYGVTIVKF R >gi|325480194|gb|AEXN01000038.1| GENE 7 6997 - 9213 2243 738 aa, chain - ## HITS:1 COG:MA0538 KEGG:ns NR:ns ## COG: MA0538 COG0826 # Protein_GI_number: 20089427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Methanosarcina acetivorans str.C2A # 5 492 7 523 855 306 36.0 1e-82 MKNTEILAPVGKMSMLDAGISAGACSFYLALDDFGARAYAKNFSLENIEEVIDYIHLFDK KVFITINTLIKDEEIDKAIFYIEKLFEYGADAILIQDIGLYSLVKNINKNAKHKLEFHAS TQMAIKDYEGALTAKNLGFDRVVVARETEIDEIEKICKLDIYTEVFVHGSLCVSFSGECL LSSYLGKRSANRGRCAGICRKKYKLINDGKILGEDYYLSMKDLSTIDYTDRLIKAGVDSL KIEGRMKTDEYVYNTVINYRKKLEKNFYDKDQLRDISNRSYTKGFIFGQKSSYLALEDEN KHREIGQVYEKNGKRFFKSNSSLIKESILQVTTEKNRKLPLTLTEDLKKGQELELKDFKD AKIGSKIYLLSSKVLKDNLDQGLNSYKNLPLDIKFEAKIGKYPKITLQYKDTKISYEGES LVEEGKNISLEKEDIKENLTKLGNTIYEAGNVEIDIDQNIFLRKKDINSMRRSAVEDLNE KRLAFYKNNPVKIKKRKLKENKTFTREKNIELLSNDVDVSLLKDFDNIYLRKYDKKFDGL NIFYIMDADKKYDHNFISFLKEKNFKGVVFNNYKDFVLKDELLKNGLEIRIGRYLNVFNS YSFDFYSDFSSMICSSVENYFENINKNSKSYPTEILAYGPIELMNMRHCPFSAIKKCGLE GCESCKFSNSQIKDEDNNLFDIKRSDGLSRIYSKEITNIDLKKIENSVSLLYLVRDNEDI KNIRRSKINNLGYDRGVI >gi|325480194|gb|AEXN01000038.1| GENE 8 9213 - 9737 657 174 aa, chain - ## HITS:1 COG:no KEGG:Apre_1338 NR:ns ## KEGG: Apre_1338 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 174 1 163 163 65 35.0 1e-09 MADNKIVVNIAGMDYTLVSEKENNEIKQIAAYVDKKIREIDNDKLTRENQLVLASVNIAD EMYKILIKHKELREKAKEPIENYPKIKEAYKKLEEENKITKDDFEKSKKDFMESMKKIDG LNSTINRLNAEIDKKNKINKSKDENLKKLRENLTKLQEENLDLQKENEDLKRDL >gi|325480194|gb|AEXN01000038.1| GENE 9 9746 - 11959 2534 737 aa, chain - ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 97 728 13 645 654 469 40.0 1e-131 HPNADKLFVLTIDVGEEITIVTSAKNTKEGDYLIVIRSGSKINGQKIDDHDFFGIVSQGM LTSYKEIGYDDSVIEKKSKDGVIVLSGEFKPGTPAVEVLFSNSPVIEYEITPNRPDCLSI IGMARESAASFDKKITYPLTEYPTVSDKKDQYFNGIEIKSKNCKRFTGRIIKNVKIGESP QWLKNCLMLAGMRPVNNVVDITNFVMLETGQPLHAYDLETLHDRKIIVRDAKEGEVIKTL DGEERKLNEEVLVISDGKEAIGLAGIMGSMDSEITEDTKTILLEAANFDSDNIRKSSKFL NLRSEASSRFEKEISVENAEFASKRAMKLITDLGIGQVLEDHFDEGIKESPENKVRLRIS RLNSLIGREFLKDEAISYLKSLEFEVKDIDADTIEAKIPDFRMDISIEADLIEEVARLYG MGKVESKPLYSSLQRGEKTSMRLLKDELKNNLFGQKFSEITTYSFISPRDYDKLLVDKDS KLRDYIKIINPLGEDYSVMRTTLLSNMLDTFSKNIAKKQKDLRFYEIGTAFIKGGDDLPE EKQYLTMGLYGDYSFYDLKDFFIKAMNKTGFRGFRFETEENIKTFHPGRCANIYLDGQKI GIMGQISYEVMEEFKIKNPALALEINLSMIKDKKIDQVKYKALSKFPSILRDYSFTCDRD VESQSIEDKIIEKADGLVRNIEIFDIYTGDQIDQGKKSISYKVAYGKNDATLKDEEVQKI EKAFLEDLSKENINLRS Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:16:59 2011 Seq name: gi|325480140|gb|AEXN01000039.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00010, whole genome shotgun sequence Length of sequence - 64867 bp Number of predicted genes - 57, with homology - 52 Number of transcription units - 24, operones - 11 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 1566 180 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 2 1 Op 2 15/0.000 - CDS 1578 - 2600 211 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 3 1 Op 3 34/0.000 - CDS 2554 - 3030 161 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 4 1 Op 4 . - CDS 3032 - 3703 555 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 5 1 Op 5 . - CDS 3700 - 4290 474 ## TDE0257 hypothetical protein - Prom 4319 - 4378 2.6 6 2 Op 1 . - CDS 4397 - 5407 817 ## COG2207 AraC-type DNA-binding domain-containing proteins 7 2 Op 2 . - CDS 5410 - 6225 555 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 8 2 Op 3 . - CDS 6225 - 7304 822 ## Dtox_2673 saccharopine dehydrogenase 9 2 Op 4 7/0.000 - CDS 7313 - 9994 1831 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 10 2 Op 5 . - CDS 9994 - 14769 3899 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 11 2 Op 6 . - CDS 14782 - 16368 1435 ## COG1021 Peptide arylation enzymes 12 2 Op 7 . - CDS 16368 - 17060 570 ## COG2091 Phosphopantetheinyl transferase 13 2 Op 8 . - CDS 17050 - 17802 736 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis - Prom 17901 - 17960 5.8 - Term 17912 - 17960 6.2 14 3 Tu 1 . - CDS 17965 - 18255 214 ## COG1321 Mn-dependent transcriptional regulator - Prom 18482 - 18541 8.0 - Term 18525 - 18571 2.7 15 4 Tu 1 . - CDS 18704 - 19981 576 ## COG3547 Transposase and inactivated derivatives - Prom 20056 - 20115 2.9 16 5 Tu 1 . - CDS 20128 - 20211 58 ## - Prom 20412 - 20471 5.9 + Prom 20283 - 20342 6.6 17 6 Op 1 . + CDS 20395 - 20751 369 ## MGAS10750_Spy1711 hypothetical protein 18 6 Op 2 . + CDS 20753 - 22084 857 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) + Term 22132 - 22185 5.5 - Term 22234 - 22271 4.8 19 7 Tu 1 . - CDS 22301 - 23014 421 ## COG3328 Transposase and inactivated derivatives - Prom 23072 - 23131 6.1 20 8 Tu 1 . - CDS 23333 - 23578 317 ## gi|227499540|ref|ZP_03929647.1| possible transposase - Prom 23628 - 23687 7.6 21 9 Tu 1 . - CDS 23703 - 24269 491 ## Apre_1750 hypothetical protein - Prom 24295 - 24354 3.1 - Term 24298 - 24343 13.2 22 10 Tu 1 . - CDS 24382 - 24573 219 ## - Prom 24692 - 24751 10.3 23 11 Op 1 . - CDS 24759 - 25997 825 ## Pmob_1519 radical SAM domain-containing protein 24 11 Op 2 . - CDS 26010 - 27059 332 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 25 11 Op 3 . - CDS 27068 - 28087 530 ## gi|325849321|ref|ZP_08170738.1| hypothetical protein HMPREF9246_0358 26 11 Op 4 . - CDS 28071 - 29429 632 ## COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain - Prom 29637 - 29696 7.6 + Prom 29404 - 29463 8.3 27 12 Tu 1 . + CDS 29587 - 29715 63 ## 28 13 Op 1 . - CDS 29727 - 30878 717 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 29 13 Op 2 . - CDS 30881 - 33211 1540 ## ELI_3750 permease 30 13 Op 3 . - CDS 33211 - 33891 335 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) - Prom 34073 - 34132 10.2 + Prom 34172 - 34231 10.5 31 14 Tu 1 . + CDS 34260 - 34457 245 ## gi|325849293|ref|ZP_08170710.1| DNA-binding helix-turn-helix protein + Term 34461 - 34525 6.0 + Prom 34588 - 34647 8.9 32 15 Tu 1 . + CDS 34726 - 35070 306 ## SEQ_1249 conjugative transposon mobilization protein 33 16 Tu 1 . - CDS 35212 - 35643 279 ## Apre_1752 hypothetical protein - Prom 35725 - 35784 12.3 + Prom 35515 - 35574 6.6 34 17 Tu 1 . + CDS 35678 - 35944 223 ## gi|195867534|ref|ZP_03079537.1| conserved hypothetical protein - Term 35803 - 35852 -0.6 35 18 Tu 1 . - CDS 35916 - 36485 367 ## Apre_1750 hypothetical protein - Prom 36530 - 36589 7.0 - Term 37114 - 37163 10.2 36 19 Op 1 . - CDS 37204 - 37470 257 ## FMG_0944 hypothetical protein 37 19 Op 2 . - CDS 37513 - 37944 338 ## Apre_1752 hypothetical protein - Term 37954 - 38001 4.1 38 19 Op 3 . - CDS 38006 - 38146 66 ## - Prom 38167 - 38226 4.0 39 20 Op 1 . - CDS 39003 - 40631 826 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 40 20 Op 2 . - CDS 40641 - 41579 486 ## gi|325849295|ref|ZP_08170712.1| hypothetical protein HMPREF9246_0371 41 20 Op 3 . - CDS 41604 - 42329 203 ## gi|325849288|ref|ZP_08170705.1| conserved domain protein 42 20 Op 4 1/0.000 - CDS 42313 - 43197 254 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 43 20 Op 5 5/0.000 - CDS 43175 - 44452 389 ## COG0535 Predicted Fe-S oxidoreductases 44 20 Op 6 . - CDS 44439 - 45512 497 ## COG0535 Predicted Fe-S oxidoreductases - Prom 45611 - 45670 6.8 - Term 45650 - 45704 2.7 45 21 Op 1 . - CDS 45726 - 45899 276 ## gi|325849300|ref|ZP_08170717.1| hypothetical protein HMPREF9246_0376 46 21 Op 2 . - CDS 45960 - 47006 1024 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Prom 47030 - 47089 3.6 47 21 Op 3 . - CDS 47098 - 47496 519 ## gi|325849307|ref|ZP_08170724.1| hypothetical protein HMPREF9246_0378 - Prom 47553 - 47612 6.3 48 22 Op 1 . - CDS 47637 - 49262 906 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 49 22 Op 2 . - CDS 49264 - 49530 245 ## gi|303233506|ref|ZP_07320169.1| hypothetical protein HMPREF9289_0173 50 22 Op 3 . - CDS 49532 - 51721 1282 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) 51 22 Op 4 . - CDS 51708 - 51890 245 ## - Prom 51929 - 51988 9.8 - Term 51970 - 52016 7.1 52 23 Op 1 . - CDS 52019 - 52624 557 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 53 23 Op 2 . - CDS 52596 - 54143 669 ## Apre_1851 hypothetical protein - Prom 54274 - 54333 12.4 - Term 54422 - 54451 2.1 54 24 Op 1 . - CDS 54457 - 55113 790 ## MGAS10750_Spy1699 hypothetical protein - Term 55125 - 55155 1.0 55 24 Op 2 . - CDS 55157 - 62800 7250 ## COG4646 DNA methylase 56 24 Op 3 1/0.000 - CDS 62787 - 63752 684 ## COG0270 Site-specific DNA methylase 57 24 Op 4 . - CDS 63745 - 64866 1112 ## COG0550 Topoisomerase IA Predicted protein(s) >gi|325480140|gb|AEXN01000039.1| GENE 1 1 - 1566 180 522 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 334 522 133 321 398 73 28 2e-12 MDLIKQYVSKRKGSYFASVLLAIVGVVAGFFSYIYMAKIIVNLINGVSDMNLYTPLCISI LITFVIKEVAAGISTSISHTATFNSLGEIRNDISKKLFKMPLGDVLSRSSGEFKNIIVEQ VDSMETSLAHLVPEFTANLVGPILLFIYMFTLDWRLTLLSLIPFVVGMSIMMSVMNAHYK EMFGKSVAIGQHMNNSIVEYINGIEVIKTFNQSESSYKKYADAVYDNASFYYNWMGESMN RVAIGRLLSPMGIITIIPFGILFYINGSIDLGNLITLIVLSFATVSSILKIMNYMDDMSR ISTITSEIGKILDSRELENIDKGEKIESYNVELQDVDFSYDGKNKVIDNLSMEIKESSVS ALVGPSGSGKSTIAKLIAGFWNVDKGSIKIGGVETKDVSLENLSSLISFVSQDNFLFDMT IKENIRLGNKNASDEEIIDVCKKSACYNFIMNLSNGYDTRVGEGGGHLSGGERQRISIAR AMLKNAPIVILDEATSYIDPENEALIQNALANLVKGKTLIII >gi|325480140|gb|AEXN01000039.1| GENE 2 1578 - 2600 211 340 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 119 324 2 225 245 85 25 5e-16 MEKDKKIAIASINALNPPIYVFDEPSANLDMKSVEALRKLMLLLKKNKKTIIISEHRLYY LRGVVDKYYYLENGEISNVFTEEELLLKSEDFFNKLGLRFFSLNKISPKINKLKEINSMN LEKISFSYNKNVLIKDLTYEFKSGNIYGIIGDNGIGKSTLFKILSGLMKKDSGFISINGE KLNKRNRQKRIYYLSNNPDSNLFEVSAKDELKLNNKDADTDKILADFNLENIKDIHPQIM SGGQKQRLTIASAELLERDVYLFDEPTSGLDGHNMQIISERMKELQEKEKIILIISHDYE FLCNSCNKILYLDGYSFEEFSTKEDKEKILAILMGKKFNI >gi|325480140|gb|AEXN01000039.1| GENE 3 2554 - 3030 161 158 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 149 1 147 245 66 32 5e-19 MIKLKNVSFAYSKDSANILKNINLEINDGECVAFIGASGCGKTTLTRLINGLAYKFYGGK LKGEISIDGINPLEKELYEIGRKVGSIFQNPKSQFFAENVEDEIAFGLENYGIEREKIDE IINNSLKSINGEDLKDKNLFHLSSGERQKNSNCFNKCT >gi|325480140|gb|AEXN01000039.1| GENE 4 3032 - 3703 555 223 aa, chain - ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 82 207 7 133 147 60 33.0 2e-09 MMHLDLRSKLVVFLSTVFLVSVLSKDTVFFLLAAILVIYVSLQGYSKSTIKLIIAMGVLS FLRFVSNGEGFGILIPDMFLFIVIRTLVIVLSVIPILKTPPGEIMAIMKKMKIHRNVALP LIFMMRFFPVVKSEFKEIIDSLRLRGLISIKKPFLTMEYLFVPMMFSSSKIAEELAAASE VRGISASGKHSSRREIKFRNLDVIVCLITIFITMSMIFLERSY >gi|325480140|gb|AEXN01000039.1| GENE 5 3700 - 4290 474 196 aa, chain - ## HITS:1 COG:no KEGG:TDE0257 NR:ns ## KEGG: TDE0257 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 3 195 4 200 200 104 30.0 2e-21 MESKKLTIKDLATIGIFSAIMIVVFIAFSMITGASLFFNMIFNAVFTALILGPFFVYMAM KVGKPGVALIYNIIQAILATVFMGPFMIPWFVGGGIIAELSMLGTDSYRNIKRITIAWII TSLTRAAHGMSEIWFFKDAFIKSGVSPEQVQIQTQYYTNPKWILISLACTIVAAIIGCYL GNKMTEKHFKKTGIIK >gi|325480140|gb|AEXN01000039.1| GENE 6 4397 - 5407 817 336 aa, chain - ## HITS:1 COG:mlr4907 KEGG:ns NR:ns ## COG: mlr4907 COG2207 # Protein_GI_number: 13474103 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 226 330 193 297 305 67 30.0 5e-11 MKCYLKNIDKEVDIMSHLYGRNKKKILENSKNRIYKYDGLENGKYVITEYEIFKGVRVFY NDIHTSKITSSIPKNSLNERRYEINHCREGRFECVLRDGTVTYMEAGDFAINLISNSSKE SFFPISHYHGVTFCITPSEFDDELHLLEKMFGIKYEEVLANLCHDNKLFIQRATSEIDHI FFEMYKVPDHILVAYLKVKFQELFLYLTTVQNNASYSDRQYFAKNNIEIAKKINAYVLKN YNRTLLYEKLSEKFHIKITTMKKCYNSVFGETVNDTIIKKRLEVGANLLKESSLTITEIA LQVGYTDHSKFSNAFKKKYKITPSEYRKISEIANSV >gi|325480140|gb|AEXN01000039.1| GENE 7 5410 - 6225 555 271 aa, chain - ## HITS:1 COG:CC3442 KEGG:ns NR:ns ## COG: CC3442 COG0596 # Protein_GI_number: 16127672 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Caulobacter vibrioides # 43 263 9 242 249 66 23.0 5e-11 MNKLKKINNKIISNNGKKTEFYYIEHLQAKSYKNLVFIHGANHAAWCWNFHFMTFFYEKG YNVYSVNLYNRGNSSNIGKVLLSEYVEQINDFIEYLDKKIIIIGHSVGTSIVQKYISKYR KNVEKCILMCPVAPWGMKYDLITMFYKKPMKKVLLELYNNKFIKKYPVELFFENKPSYIK NEYFIPENFNECFSTFLEKSEINKNVPTLILGTRNDQVMNYKTIYKMVTYYNSEFVIYNK IGHDMMMDFGWEIVADDILKFISDFHDAGEV >gi|325480140|gb|AEXN01000039.1| GENE 8 6225 - 7304 822 359 aa, chain - ## HITS:1 COG:no KEGG:Dtox_2673 NR:ns ## KEGG: Dtox_2673 # Name: not_defined # Def: saccharopine dehydrogenase # Organism: D.acetoxidans # Pathway: not_defined # 5 300 6 311 377 101 28.0 4e-20 MSYRIGVLGSNGKVGTKLCDFLDRNNISFVKASRSGKKTLERHFIFDIYNAYEFESFLKS VDIVINCIGPTFYYGKYIAKKIISNNKIYIDAFGDEFVCENILDSINSVVVISAGDCPGF SGVIPFWVKKKYYDKISKMEISYFCGGEVTASGLLDILMSTDMGYGFVSTYYKFGKYIKI NNSCMTKHLNCFDRDFYCKPFINNEIVDVANSLDIDEIYFNNLYYNEKRDLLLRDIYSEI SDQNISWKDANSILINKLDLINDVNFDGTVYKIEVEGKKSGRDRTLTLEITAAESYTISA YILYKTIERLLLSDCKLDVRKIRPFDLVDSEVIFREMIELGIIKNISENKNVEYDVGTL >gi|325480140|gb|AEXN01000039.1| GENE 9 7313 - 9994 1831 893 aa, chain - ## HITS:1 COG:YPO0776 KEGG:ns NR:ns ## COG: YPO0776 COG1020 # Protein_GI_number: 16121089 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Yersinia pestis # 118 890 1133 1933 1939 216 22.0 1e-55 MKNIKNLINSLNEKGILIWEKGGKIAYKSPVGAMNEELKNEILNNRDELVEYIKEKSRIK RMKIINNDALVEITPLSNREENFVAIKENIKNEVEKFELEYVDLINDSNLSKWVENANDV SLRDMFKTFYNGGIFRDNKYYSLDDIIDMLEIDSDYEHFIAKWLKVLVERKIILENDEGY KFIDYSYIEKINEDYWKNFAKIEETINYGQDFFDYMNKCSRSLLDILQKKIKTVDILFPE GAENSAIGLYSDNKGSRLFNKLVGNVVHKYIQTHEKKSIKILEIGAGIGGTTRYIMDKIK NEKFEYYYTDISYYFLNKAMEKYGTQNVHYKIYDINDSIYKQGFGDEKFDVILCANMLHN SKNGYEVLRNINHILNDKGIFVIIDETTEPEFLLTSIELNDALSSFYDDRAKNNGVFFTY EQWETMFKTCKANIWVDFPQKDSDLALTGQRLFIGNFSESYCIDSEIVKDVIDDDCIDKI VIVDNIDKEDSMDTVSIKNHEEVNKKTLLQMIKIWEEILQSDNIKSTDSFFDVGGDSLVI TQLITKIWNVYPKTKQLKWKEFSEIIFKHPILKDLALFIDDFNNSEIQNKIEEVDNMIEL SKCNNPRRIYILFHDGTGELNVYNNFIRALNEKEGNVSIYGFRIDNIRKFNNKSFYRDLA NEYSDSILSKFNENEIVLVGHCVGGLLALETGNILSKKDINISEVILISSFLNEGKILFG NNILKKYLDSDFLMGIIFREVIGDRQSDNHIYWSDIENAVKYMEINGFNSIENSIRETQY INKNLYNMLMDYEGGNLIPPQYAKQFDIFKKHFLAASEYEPSPYEGVLKFVHGNLRTDNF FMEGEGLFNDAENLWKKLVTTNIIYYTIDADHFTVMDKENCNKIIENLLQKMR >gi|325480140|gb|AEXN01000039.1| GENE 10 9994 - 14769 3899 1591 aa, chain - ## HITS:1 COG:YPO1911_2 KEGG:ns NR:ns ## COG: YPO1911_2 COG1020 # Protein_GI_number: 16122159 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Yersinia pestis # 97 994 5 895 1381 634 38.0 0 MEFDARKEIKLIIEKWLKDTLKKSDIKENDNLIEKGLSSMQVMQLSGIIKKEGLRISFAK LIEKPTLNSWFDLVANSKIIKKHSKDNKKSNDGKDSFNLTDVQYSYFIGRSDDQTLGGVG CHAYIEIDGKDIDYKRLNDAWNKLQYRHPMLRARFTEDGKQEILDKPFSEKIEVFDLSNL DEKERKIRLDEIRENLSHRKFRVEIGEVAGLKLANLSHNRNKIFFDLDLLVADVMSLSLI LKELGELYLGKELDNLNSYTFKDYINNLEVDSEIYKKDQEFWKEKIDSFEIERPNLPLKK APEQIKETRFTRRKRVIEKDKWSKIKEVAASYKSTPSMVLLTAYALILERWTNQDKFFIN LPLFNRDLSNENLKAMVADFTNILLVEHERKNDTSFLETLNRISKTFIDNASHSSYSGVQ VQRDISKLQGSSLNVAPVVFACNIDYPLETETSSKALGKITYMVSQTPGVWLDFQSYIKD GDLVLCWDSVDELFSEKMLDDMLNSLEEQLLRLTEKENWKDKFDVLPKNQKQAREKELQS ILPLNFPDERLYDGFIKNVKENPEKIAIIDSETKEEISYMDLYEKSLKIAGYLKENGIKK GEYVGITLPRSSKQIYAIFGILFSGAAYVAVGINQPSERRTKIYEQIGIKFVISDNKTIE NCRLDTGEVSLIDLDKAIDKSLGLDKPIEVSPFDSAYIIMTSGTTGVPKGVEITHTSAIN TINDLNEKYSINSNDTLLMVSAIDFDLSVYDIFGILGVGGTLITTNEDNYRNPDEWIRII EKYKVSMWNSVPILFDMLVTMAEGEKKNLPLRIIMLSGDWIAKDLPGRFYKISEKENSIV VAMGGATEASIWSNYLNVPREITKDWISIPYGRPLKNQVYRVVDEMGRICPNYVKGELLI GGVGVAKRYYGDEDLTKKKYFEEGGIRWYRTGDSGRTWDDGTIEFLGRKDTQVKIKGHRI ELGEIEEAIRSKLKIKNVKVIANDKKNSLYAFVIRNDVESNYRKLESNYRELLRSIIPKY MIPDKFLYINNFPTNKNGKIDIKKLMKMVEEINVTCKRNPYEHSKKRFLKDVVEIFKEVT KNSHYDINANFFENGGDSLIALNILFKLNSKYNTSLNIKDIFESNSIIQICDTMQNEMNS YENHEQDFLELNEEKMPLTELQHSYWVNRIGYGNLVRQNANFYIELECIKLDVLKINDAI NKIISKYKIFRNVISDDGEYFENSNRDHVEVKYNDLCDYSSKMKEKLIEDIRNRIIYSID KEQLFAPLKVEITNIDINIAILHICFDNVFFDAPSIMYLLNELNLLYNNLDIENISLDRG TMIQINSDKLELDKLYWENKISKIFPAPNLLKIKNNLEIEETSGKVKRLTITLKEEQVKG LLYISGKYKVTTSNIILSVFSEIMHYWSQSTNYTINVIVINNRKDIYDYFGEIADYTSNI LHTINYNVNESLYERMIKIQNNLFEDLQHMSFEGTQVLRELKKQNRKTYVNMPIVYTNTI GLDIDINMNNIGKIKNILTQTPGVYLDLQVSLVNGQYIINWDYLENVFDEKEIKEKFEIF EHILLEVIENESFLENSDIIQNGNFYEEGIL >gi|325480140|gb|AEXN01000039.1| GENE 11 14782 - 16368 1435 528 aa, chain - ## HITS:1 COG:BS_dhbE KEGG:ns NR:ns ## COG: BS_dhbE COG1021 # Protein_GI_number: 16080251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Bacillus subtilis # 18 525 22 526 539 428 41.0 1e-119 MNIELKEKLEKIYDEQVWPHITLGEFIEDCAKKYGDKIALVDGDVEFSYQELNRKACHYA NGLLKAGFKKGDRIVLQLPNCHEFVIILFAMFKIGVIPVLSLPAHRKNEIKGILEKSGAK AYISKDKYLGFSYVDMIREVREELNIDFGVYILGDNQGYKNFYHIDDKDYLYQNIDVDYK EIGLLLLSGGTTGIPKLIPRRHCDYIYVAKETAKRCKMDQDSIYLASLPISHNFPLCCPG ILGTFFIGGKVVLCPVTSPDEILPLIEEEEVTITGLVPAMANICIDFIKEDDYDISSLKV LQVGGSVLEEKLAEKIEKEFGCKLQQIFGIAEGLIMTTSLDDDSKTIFTTQGKPISEFDE LLIVDENGEEVKDEEYGELIVRGSYTIYGYYKLPEVNKRCIDKDLYFKTGDKARKLKDEN YQVVGRISETINRAGEKITPSEIEDILLSNENIGDVQVVGVPDELLGEKIGVFILKDEKD ELSLEDIRTFLANKNVAEFKLPDSIKYIDSWPLTALGKIDRNKLKRIE >gi|325480140|gb|AEXN01000039.1| GENE 12 16368 - 17060 570 230 aa, chain - ## HITS:1 COG:RSp0163 KEGG:ns NR:ns ## COG: RSp0163 COG2091 # Protein_GI_number: 17548384 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Ralstonia solanacearum # 18 188 12 194 272 59 27.0 5e-09 MKIEEYEIRKIKDFLTLEDLKDKLASNNLILIKAYTDKLLEEKLLPYLTKEEIIKSKDYK SEIAKINYLVSRAILNLALKGLLEKEIDDLTVKRDKNNKPYVESTLGLKFNISHTEGLVL LAFFKREVGVDIEKINYKFEFKDILENCFTKDEITNIDNNIISFYRYWTAKEAYLKCDGI GLIRNLKEIEIISYGNKVIEISDNKNNIISRLQPLNYDGKYVGAICLEEK >gi|325480140|gb|AEXN01000039.1| GENE 13 17050 - 17802 736 250 aa, chain - ## HITS:1 COG:CAC1022 KEGG:ns NR:ns ## COG: CAC1022 COG3208 # Protein_GI_number: 15894309 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Clostridium acetobutylicum # 7 243 11 246 253 149 37.0 4e-36 MSKNFEILNKEINENNIIANLFIFPFAGGGVSAFRKWKDEFEDIKLFVAQYPGRENRFSE KAISDINILVDSLFEDMKESFDFRKPYYLFGHSMGTKIVYELALRIKNSDYINPRGIIIS GGRAPLYKEPLPIYNLDDDGFIEGLRRYEGTPKEILDNNDLISIFLPTLRADFVIDEDYQ DTKFEKLESPLLGLMGDKDQEMTLDELTKWQDYTTKEFTYRYIDGKHMFVNTSPDSVIKE IKEFIKVNEN >gi|325480140|gb|AEXN01000039.1| GENE 14 17965 - 18255 214 96 aa, chain - ## HITS:1 COG:MA3468 KEGG:ns NR:ns ## COG: MA3468 COG1321 # Protein_GI_number: 20092281 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Methanosarcina acetivorans str.C2A # 2 94 27 119 160 61 40.0 3e-10 MDLANYLEYKRPTVTRMLKKLENKGRIIYGEDKIIRLTEESKIFCEKMYARHKYLTDAFI RLGIDEKKAENEACLIEHVISDDTFEKLKKHFDYNL >gi|325480140|gb|AEXN01000039.1| GENE 15 18704 - 19981 576 425 aa, chain - ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 6 406 3 386 391 142 29.0 2e-33 MSEKIIVGIDVSKAFSDICILSPNNDIIKRLKISNDITGMKSLIYVLEKVEDEYEDRAVI IMEATAHYHQILANFFRKHNYEVIVINPIQSGALKNINIRKIKSDKTDAYNIALLYRIKN YNETITHSDTVNSIKKLCRQHKELTDEIVEHINRLIAFLDISFPDFKKVFTDLQGKTPLS LLEKYSTIQEVLSPENKQDIIQLIKENSHKSSSYAEVKYEKLLEAAEKSIEVCIVNLSSA VLIQTTVKVIFSLQEALKAIDDEIKRLSLLDEKFHKEIVLLQSIPGVGEYTACVVLSELG DISNFSKPKELVAFFGLDPGVSQSGTYNRKNNKISKRGSPHVRSILHMLAKSNVYPNRNR EYLNPIMRAYFEKKIAEKPYKVVMCAIMRKMVQIIFAVLRNQKSFELRTPEEHQKLIREK SKLVA >gi|325480140|gb|AEXN01000039.1| GENE 16 20128 - 20211 58 27 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLIIYDKIIDIRDEMGLFYVLAGFPT >gi|325480140|gb|AEXN01000039.1| GENE 17 20395 - 20751 369 118 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 118 35 152 152 178 88.0 5e-44 MANRFRNERIEIKLTKEEKEVFEKKMKLANCKTMSHFLRKCVLEKEIYVVDLEQFRNLQW LLSNVTNNINQIAKATNTTGVIYKNEIESMNRQIEKLSREIWQIHSLLLNKSKESSGD >gi|325480140|gb|AEXN01000039.1| GENE 18 20753 - 22084 857 443 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 51 245 74 259 402 65 30.0 2e-10 MAITKIHPIKSTLNLAIDYITKSEKTDEKILVSSFKCHPSTAHIQFMKTREDNDTKGTVL ARHLIQSFLPGEVDPIKAHEIGMELCKKILKEDYEFVLATHIDRGHIHNHIIFNNVNYKT GKCYQSNKKTYHKIRFQSDKLCKENKLSVIDKYYEAYKRKYKTAGKSWYEYDQNNKGNSW KSKLQFDIDRMINKSNSWEDFLENMKSLDYEIKFGKHIAFRHKDKQKFTRAKTIGEDYTE EKIKDRIDLAIKNKANPIKKRVGNVIDISTNEKAQSSKGYEVWVRKHNIKTMADSIIKLR ERGINSITQLDDLIKKSADDRQDLLNKIKKIETEMKSLSQDMENINTINKYREIYKYHKK NPEDKQFAEEYYSELSVYKIAAKGILESYKKLPNTKEILSKLDKLQEKKNTLMQEYSLNK EQFYDLVQYRKNYENYYGKEVER >gi|325480140|gb|AEXN01000039.1| GENE 19 22301 - 23014 421 237 aa, chain - ## HITS:1 COG:YPO0011 KEGG:ns NR:ns ## COG: YPO0011 COG3328 # Protein_GI_number: 16120364 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Yersinia pestis # 1 237 162 398 402 240 48.0 1e-63 MVFLDAIHYHVRENNIVVKKSVYIALGYNLEGFKEILGLWVGENESSKYWLLVLNGLKER GLEDVLIFSTDNLPGFSEAIEAEYPREEIQKCIIHQIRNSTKYVSYKDIKELMKDLKAVY KAPTEDLALTNLGVFEEKWGEKYPMCVSSWKNNWTELSTYFKYPEGIRKLIYTTNAMENF NRQLRKVTKNKTIFPNDYALQKSLYLAMVDASSKWTYRIRGWDQILSQLSIFFEGRF >gi|325480140|gb|AEXN01000039.1| GENE 20 23333 - 23578 317 81 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227499540|ref|ZP_03929647.1| ## NR: gi|227499540|ref|ZP_03929647.1| possible transposase [Anaerococcus tetradius ATCC 35098] possible transposase [Anaerococcus tetradius ATCC 35098] # 1 73 1 73 404 129 94.0 6e-29 MPRKRPETKRSKIAKMLIEEYQPKSSQDIQEALKYLLGDTMEELLKIELDEHLDYEYGEK PLSLNTRNGTSKKELDRHMDI >gi|325480140|gb|AEXN01000039.1| GENE 21 23703 - 24269 491 188 aa, chain - ## HITS:1 COG:no KEGG:Apre_1750 NR:ns ## KEGG: Apre_1750 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 188 1 189 189 288 71.0 1e-76 MRKKLSILSLALLFVFSLGVLIQPFNVYANSKEDMKFEEIENIGKDVQKYIVVDGDRLYF DYEKAQENYESQDLIEQGLLLESVSDSYSKSDNKTYGLRSIGLPIWGNYCGPGYGGKDSD EPVTDVLDEGCRRHDQCYKWSPTLRKNCKCNKDLVDYIDAHKSQMSGTMAKVAWAIRTYF NTVGQLGC >gi|325480140|gb|AEXN01000039.1| GENE 22 24382 - 24573 219 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHEKEVVERNDLLENDLLEEECLRNQSSEEVVNLYEKDCGQVQLHCVTDCFPFGTSFIN PDR >gi|325480140|gb|AEXN01000039.1| GENE 23 24759 - 25997 825 412 aa, chain - ## HITS:1 COG:no KEGG:Pmob_1519 NR:ns ## KEGG: Pmob_1519 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: P.mobilis # Pathway: not_defined # 41 354 73 390 422 74 24.0 8e-12 MESVQVFNLLDRIFYLNLEEEFYISIRAEKNSNKDILDSEYIKNIIKKQKQKYQKINSKR KRFNSLYLITNDDCNLNCRFCSMRSNLLERKVNSINLLDMDTIIGSIEKINPRKIIITGG EPTKNSDLLDILKLIKFNNNISSKIYLQTNGTLITEEYFSKLVKLIDGIEMSVGHYKDIS KLEDKIEMITKKGIDFVTTLTIDRTINENLDILNLIFKKNIKFILNFINNSGSAYDNNLK IMRYREKIKTYIIMLEYILNNNFNCDNVVGSLFNYPRIRKSCNAFGKMVTIFPNGDIGMC NKSFDDFFKINKYNDIIDEINNKIESKEYQELLCVDKKIMCKDCKFRYFCGGTCVADELI NSIDIEGCKMNKTFIVFNLLIYDCKMTNHDNIKSLKKYLEFCYNNPEWINNV >gi|325480140|gb|AEXN01000039.1| GENE 24 26010 - 27059 332 349 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 4 340 97 443 454 114 27.0 3e-25 MYTLSLELLKSCNLNCKYCYIEEKTKTILNITDAEKMINFSINKAIKYPDRKLHIYFIGG EPLIEYELMKHLVDYAEKIALHKGVKVSFSTTTNATLLNNKIIEYFINKNISFKISVDGD KQINDLNRIYKNGLGSYENIISKIDLLSRYEELSLKKITCTNVVTINNVHKFFDSLQHLS SIGFKIIETGFNIYDKWEDSDLKILKNQLKNISYYYLNNRQDKDNTKFIFMEKLLSNYYY GCKFFSCKAGINSIYMSADGSIYPCKEAPNLKLGNCKHEKNFMKITEIVKFNETKNKKCL SCKYLNKCSARGCISNNIIMNGDIDEPEKLYCYITKTLFEMFDKYLQIN >gi|325480140|gb|AEXN01000039.1| GENE 25 27068 - 28087 530 339 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849321|ref|ZP_08170738.1| ## NR: gi|325849321|ref|ZP_08170738.1| hypothetical protein HMPREF9246_0358 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0358 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 339 1 339 339 524 100.0 1e-147 MKSKVKIGVIDTDGSYNDINFSKCNISKLNKTIKFRYINNEDIKLSHSECVILSILKENS DVEILLENIINIKNNNTLNDICKSIVKLINMDVDIILLSLGVENKNDVSELFNVCQLAIE RNVIIVAAHSNNNITAYPASFNNVIGIKSKDIKSNKFFEYDHVDNDIRFNIKDSSFYHIN NRIKKGLVVGNSFLAGTFVGILSNYCVNLKKTNLVNLISDIEKSIGNSRCIKINNEHQIL YFYKYLSLKELQVISSKGYVLFKGENNSLINLGRYYSKSNVDNIFFNEFISKKYLIDLIE KIILNKKIDNIYTRYPIFNFFEREQIYSKDRITIKQFIL >gi|325480140|gb|AEXN01000039.1| GENE 26 28071 - 29429 632 452 aa, chain - ## HITS:1 COG:sll1180 KEGG:ns NR:ns ## COG: sll1180 COG2274 # Protein_GI_number: 16330857 # Func_class: V Defense mechanisms # Function: ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain # Organism: Synechocystis # 29 452 556 986 1011 132 24.0 1e-30 MQKKINKISTNFFISGSFETIQSKFDKNIESIKAVGINSIITLISNIILLLVIIPSMYKI DKLITTVNIGILIFVPIISKKIGKKIQVETLKTIKNYEDMIDVLIDTFKNWKAIRIFNLN TNLEDEFDKKIRRYKDSTLKKSKYFIYNNVITLLLQLIGISVIWLRGASLVINGSITVGT IIALMNYQSIITAPILDISDFYNKFNESISSLDNLNSFLYYDNEEKSNIKELKHDLICNI CLENVCYKTSNKDILQNINYKFSKGNIYAITGLSGAGKSTLLDLISKFKIPTEGSIYIDE DNLNEVNSYSYWTKVSYMEQIPNLYKNLIPKGLTEKEEKKWIDIFKYIGFIEDKLEAEDA FEEFYNREGLNYSGGEVKKIIFMRNYMKSGQIFILDEPTSGIDDKFKANILKLIKEMGKN KIIIISTHDKKEMAIADVILNITDGGLYEVKS >gi|325480140|gb|AEXN01000039.1| GENE 27 29587 - 29715 63 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISPCSFGTINETNEVIIMIIKVNKYKFTRLLSIAYFFIKLR >gi|325480140|gb|AEXN01000039.1| GENE 28 29727 - 30878 717 383 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 10 335 104 439 454 89 24.0 1e-17 MDYTIYLTTDCNFKCKYCYENYRDSFKLNKITADKIIKFIENNFSSDTITISFMGGEPLL NKELIYYFIENLEKKIDYRKIKYSITTNCSLISDDVVNLFKIKKFEVKCSIDGNKYTHNK NRISKNNYDCYDFIIKHIKSMLLEGIDISIRMTVTNNTIGDLSKNIEYFYNLGVRKISII FDVFMKINSFEKKLIKNELNKIKKFYLRKIMDRDKLNIAQIDGKFINLLSDFGKHFTMCD AGVTNLKIMPDGNIYPCGFVTDMPYCKLGNIDNNKYKYEKNLGKSLAYNLYDNNQKKCND CEYINFCLGMKCGYMNYIVTGSINVPSDTTCIIEKLFYEIVKEILHDLAKDDNLIHEYIY PYILFIKESNLKLSRLGENLLYE >gi|325480140|gb|AEXN01000039.1| GENE 29 30881 - 33211 1540 776 aa, chain - ## HITS:1 COG:no KEGG:ELI_3750 NR:ns ## KEGG: ELI_3750 # Name: not_defined # Def: permease # Organism: E.limosum # Pathway: not_defined # 4 776 14 798 800 193 21.0 3e-47 MNYISRLATKYIRGENKNFLIGLTIIFSAFILSLTLSFSASNQIGIHKTTKYMPQITVLN KSDKINDIKSDRSIDKIVTLNIIDQVKFQGSPTNVIYLDNNNYFDSIKGELPIDSHEIMI EKSISDKYGLKIGDEIKVDDNSGEKTFTISSIAYRDMEVSQANLYVSENYFKNSKVKVSS SMIFLKDKSEKFAYSKANEIRDKFEIPKENINIYNEFFTYSNNQKISDASIELMLILLLL SITTSLVLYSIYYISINRSINELGKLRALGLKRKDLKKLIIRQAQFIAIPSGIVGGLLGI FVNILIRPGTFDFKIHGSIFIATVIFVFTIACISTLRPANYASKISPVEAMSYTSYTDVI APRHSSKKVTPLYLGMLNAKRNKKRSIFTLISLALCSVIFIAMIGVFSSISTEDIAKNTK FKLGEYNITFKFMEYKPDDINASNYKKAFTQAENNPIDEKLISKIKEIDGIDRINIEKAT TVNFDIEKNDIRNQVTTIVGYKETDIDKLKTKLVLGDIKDDNDLIVNNANNVFEDVYKLS PKLGDTIRLKFRGKDGHIDEKDFTISAILNDTSSEYIFGIPEKKLEELCDYNINNSISLK LKDSINKKKMNIIEDKVRNILSENKLLEFNKVDDYVKELNKQYKTILLASLIFTCVFLIF ALFNVINLSITTFIERKNQIGTMMALGMKKSHFILSRIFETQIIIVISNIISIILGGIIG KTLIDIIGDMVLKFEYNFNLIYVLAYLILIHVLAAIIEIVIAKTVDNESLIKYIEE >gi|325480140|gb|AEXN01000039.1| GENE 30 33211 - 33891 335 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 2 200 3 199 223 133 38 2e-30 MEILNIKAIKKYYGTVNNQVKALDGVDLEVGKGDFLIIQGASGSGKSTLLNIIGGLDRAT SGSVKINGINLADLDDNGLTEFRSKNIGFIFQRFNLINILNIKENILFPLNISGLVEDEK YLNKIVDTLGIEDILQKMPNELSGGQQQRVAIARALITNPSILLADEPTGNLDSKNSKNV IDLLVSTNRNFNQTIILITHDQNIVEYLLENKYASIVRLEDGRLSK >gi|325480140|gb|AEXN01000039.1| GENE 31 34260 - 34457 245 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|325849293|ref|ZP_08170710.1| ## NR: gi|325849293|ref|ZP_08170710.1| DNA-binding helix-turn-helix protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] DNA-binding helix-turn-helix protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 65 1 65 65 103 100.0 3e-21 MIKNHIKEYRKKEGLTQYELAQKIDLTRRGVIYLENHSKDVNLSTAMKLSKVLKVSIDDL FEMDD >gi|325480140|gb|AEXN01000039.1| GENE 32 34726 - 35070 306 114 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1249 NR:ns ## KEGG: SEQ_1249 # Name: not_defined # Def: conjugative transposon mobilization protein # Organism: S.equi_equi # Pathway: not_defined # 1 113 1 113 122 144 74.0 1e-33 MANRYRNNGIYLTLSDEELEILNKKYKASKCKSLRQFILKCILEKDIYVLDMDVFRDMST NISRTSSNINQIAKRVNSTSFIYKDDIDDLKKLLEKQARDILFEIFLLNKLSNI >gi|325480140|gb|AEXN01000039.1| GENE 33 35212 - 35643 279 143 aa, chain - ## HITS:1 COG:no KEGG:Apre_1752 NR:ns ## KEGG: Apre_1752 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 143 1 142 142 185 74.0 4e-46 MKNKKVIKSIYVVVIVLAIFKLFKFNISNYEQFYQLSNYEIKKRQLNQIEWEDIGKKDGI YLLTSKDCPYCLHYISNGIELVKKESEEHDLSKNVVDLDIGEYFNNTELNRILDYYGINS IPCILEIKENKIRLIEFEDIQKF >gi|325480140|gb|AEXN01000039.1| GENE 34 35678 - 35944 223 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|195867534|ref|ZP_03079537.1| ## NR: gi|195867534|ref|ZP_03079537.1| conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] conserved hypothetical protein [Ureaplasma urealyticum serovar 9 str. ATCC 33175] # 2 82 112 192 208 81 62.0 2e-14 MNIIIGKDNTNNKFKKTNSIDFLFMDDIKPIIPSIGHIKIVLIPKGFNSVNLFNKSTGRI YEITNTIIPSTNVYFPILVLSIQLAPQY >gi|325480140|gb|AEXN01000039.1| GENE 35 35916 - 36485 367 189 aa, chain - ## HITS:1 COG:no KEGG:Apre_1750 NR:ns ## KEGG: Apre_1750 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 189 1 189 189 374 94.0 1e-102 MKEKFKKIFLGLIFVLAICVLIFPNNNVAASDGENLSYSEIEKIGDEVKEYIIVDNGRLY FNYQKAQDNSESPEVIEQGLLLESVSSNYAEFNTEGYSTRSIGLPIWGNYCGPGYGGKDS DEPATDVLDEGCRRHDQCYKWSLTLRKNCKCNKDLVDYIDTHKSEMSGTMAKVAWAIRTY FNTVGQVGC >gi|325480140|gb|AEXN01000039.1| GENE 36 37204 - 37470 257 88 aa, chain - ## HITS:1 COG:no KEGG:FMG_0944 NR:ns ## KEGG: FMG_0944 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 18 88 1 71 71 77 81.0 2e-13 MKGKISKKIFLLGLVIFVISYLLPVGIFESYTSLRPTGITSMFVCPIIGLIGLIFGVKEK DKLFMLLNILLILLLPISLFAGHLVGSL >gi|325480140|gb|AEXN01000039.1| GENE 37 37513 - 37944 338 143 aa, chain - ## HITS:1 COG:no KEGG:Apre_1752 NR:ns ## KEGG: Apre_1752 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 143 1 142 142 177 69.0 1e-43 MKNKKILKAVYLVVIVLAIFKLFKLNISNYEQFYQISNYEIKKRQLNKIEWKDIGKKDGV YLLTSKGCPYCLRYISRGIDIVKKESEEHDLSKNIVDLDIDEYFNNADLNKILEYYSINT IPCILEIKNNEVKLIEFEEIKKY >gi|325480140|gb|AEXN01000039.1| GENE 38 38006 - 38146 66 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNLLNKFTELKPLDISTIFICPVLGMIGLIFSLKRKSIQFTLLNFY >gi|325480140|gb|AEXN01000039.1| GENE 39 39003 - 40631 826 542 aa, chain - ## HITS:1 COG:BS_ygaD KEGG:ns NR:ns ## COG: BS_ygaD COG1132 # Protein_GI_number: 16077935 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Bacillus subtilis # 7 540 16 556 589 150 23.0 8e-36 MREKNLYFKFIKKYCIEKKMIILYILLLGVIIISAISSLFRPKCQAILIDSLSKANNISI NRKILIIFLFLVFVSYIGKNLIEYFTQCISELIASNLKCSIVEKLYRIDNEYYLENNYSD IQVKIDKDIETIKKFGVSNLIMIFSDTILLIFVIPFMIKIDVKVTLINISFLLLIPVIIN YYGKLIEESSSLVLKCYSDLISIFEDIFCNWKNSRLNNCVNYTINKAISSTSKYQKEILN RNKLILFDGALTFCCQFIGIIFIWIMGASKITNGLMSVGTMLALMNYQAMLTSPILHISD FFNDYYIAKESLKNLNQFMEYQNEKNLNYRIENIENIEFKNVTFEYKKNIKIFENLNFNL NKGFIYALEGKSGQGKTTIANLICGFLDKYDGKILVNNINLNNINKNKYREKISYVMQFP IFYNDSIMNNLLLVNEDKNKILTTAKKLNIYQEIIKKDKEWNTIIKKDNSNFSGGQIKRL DILRNTIKKFDLLILDEPTAGLDEINKEKVLRYIYNISKDKIIIIITHDDSEKSIADYMI KI >gi|325480140|gb|AEXN01000039.1| GENE 40 40641 - 41579 486 312 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849295|ref|ZP_08170712.1| ## NR: gi|325849295|ref|ZP_08170712.1| hypothetical protein HMPREF9246_0371 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0371 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 312 1 312 312 525 100.0 1e-147 MKKIKIGIIDGYYRNDEEKNIITVNNSKIQNINNFHTKIILDLIKNKLGDSCERNIEFII LPILNLNNFGELRDLYWALEKCLLMDVDIINVSLGTNRVIKNKIIDKLIGELKKKGILIV SSFDNSNNPETYIASSPLVMGVESSICGYSYIYKNDNFYKIGKNICFKYNDVLLKGKRFT GNSYLCAKIVGVLSKKMLTGKKLTLKNKDLLISFKPRGELINLLDIKNNKVFNDYENYKF KERIDQSNTLFINKNYVKMSFNERLKFLDFLFKNALQYDLNVVSEVEIDNVRDFEIYLRE FENKGLDFIKIF >gi|325480140|gb|AEXN01000039.1| GENE 41 41604 - 42329 203 241 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849288|ref|ZP_08170705.1| ## NR: gi|325849288|ref|ZP_08170705.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 241 1 241 241 354 100.0 4e-96 MERLNREFLKIKGTKIYLGSIYASIILTGFIVFKDVFMAESVRRIGVEKWVWSNILIGNF ILLHMISIIFITLIIQREYSNNITQNLLAYLKNRFDFIIGKIAIWFSLHLIITICSYLMA LIGGLVIFKNLEYSSYIEYLSIIYLKTLILGFLILIPNLVVCIAQKKNYIVSFISGAITI LLSVGFLQANNIIPYILPWSSAYILIFNANNPYKIWEMASIIIIVFISLFLALHILKKQE F >gi|325480140|gb|AEXN01000039.1| GENE 42 42313 - 43197 254 294 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 4 250 12 271 312 102 31 5e-21 MSCLEISDLTKSYDKKTILNNINLTIDSGKIVGLLGENGAGKSTLMKCIVGLVKIDSGEI NFKFKGKNKLGFLIEYPAFYPNLSAFDNLKIFASLLDIKNERISEVIKEVGLYKYTDVIF DNYSLGMKQRLGLARAILANPDLLILDEPFNGLDPSGIIEIRNLLKKLTYSGKSILVSSH NLPEIEKIADEIDLLYDKRIVESFNMSDIQQMNKLIVKSNNPKEIKQMLEKYKLNYFYKI YEQTLVIQGEVINSERILDLIYKNKFRISEIYFQRTSLEEHFEEMVGAKIGKIK >gi|325480140|gb|AEXN01000039.1| GENE 43 43175 - 44452 389 425 aa, chain - ## HITS:1 COG:PA0511 KEGG:ns NR:ns ## COG: PA0511 COG0535 # Protein_GI_number: 15595708 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Pseudomonas aeruginosa # 79 226 37 193 387 60 26.0 7e-09 MKLTEGTYILESQGYIIIYNIYNSSYVKIKIKEIESHKHKIEKLLIEDGFLTKKNEQLFL TDTNYNNKNTIYLKITNNCNLSCEFCCSASSNNIVEPYVDLKNFNIIFSWLKSINFKRLV LTGGEPLKHPEILSILKLKDSRYKMILSTNGLLINKNNINDIAKNIDYIIISVENLFEDI SMIKWLDNCINEFRKRNVKVALSYVVTKKNILRVINFLDYCNNKDVDISLKIVAPIGKAM INKGILLEEEEVNNLYYKIYCHFATVKNISHKIHNFLFPIIRPKLNCSAGNKTISINAEG EVYACHSLEKDFFKYGNIIDGEINEKKLLSGVDLSPLNLCNNLFCNNCEIKYFCGGNCYA ERVSYGENKRCNCEFFKELIIFSLFNYDKQQSCKENLKEFISGKSKNYILDLKERRSWNE LFRNK >gi|325480140|gb|AEXN01000039.1| GENE 44 44439 - 45512 497 357 aa, chain - ## HITS:1 COG:SSO2211 KEGG:ns NR:ns ## COG: SSO2211 COG0535 # Protein_GI_number: 15898986 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Sulfolobus solfataricus # 9 309 8 284 350 83 27.0 7e-16 MIYCDIEVSNSCNLECSYCFLEKTNQKSLNIQDLNKRIALISNRLRYLKQYEATIEFSGG EPLLEIESIKYIVEKFDKSNINVKYSMVTNGTLLSKEVFRYLMEKKFLLGISIDGGEETQ NKNRTFRNTSEGSFQLIKHNIDNIIDSYPEDFQNQCIAHMVISKNNYKEFFKSFVQIINI GFKKISSSLDVTYNWDDKQLDILEVELRKCAQYYFNLCNKDKSYYWDFLEKGIQAIINPK QHYFCGGGIIQFTIKADGRILSCGMCQSLEKAVIGDVDAGIIEYKVKPYGNYKRKFNSTC VKCDLKEYCHVPDCVFLNEEITGEECGVPNFFCEMYKINNRISNKIIDKWRKLNEVN >gi|325480140|gb|AEXN01000039.1| GENE 45 45726 - 45899 276 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849300|ref|ZP_08170717.1| ## NR: gi|325849300|ref|ZP_08170717.1| hypothetical protein HMPREF9246_0376 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0376 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 57 1 57 57 82 100.0 1e-14 MKNSEDLKNKEVLTSCDSDANVEKEFDYELEGYATCQTASRRCEQDCLGSCFMTCDN >gi|325480140|gb|AEXN01000039.1| GENE 46 45960 - 47006 1024 348 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 1 308 126 439 454 95 27.0 1e-19 MKLKTAIETIDFYFDKYNKFDSISSLRFHGGEPLLQFDILKEMVYYFEKKSNALNKDSKF ELTTNGTLINEEIANFINEHDFKVTVSLDGNKSEHDKNRVFLNGEGSYDETIIGLKTLRN IVGPNKIFLRLTITPDTIDSLYENIRFLMNLGYKKFRLSLDFYSNWIGEEFKIEKQFTKL KNLYIENRGDIYLDIFDGNYTNYILENQNIVYCNAGLGSVIVDTDGILYPCAYSMDEEFQ IGNIWTGVKFEKFSEIIKKYFNKNNQIYKKCKECEVKRFCMGLKCSFVNLSVNGKLNVPP YGMCVQEKILYYLMKDIISTLILNNDYEFKKLVDIIKSKKELSIIEGL >gi|325480140|gb|AEXN01000039.1| GENE 47 47098 - 47496 519 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849307|ref|ZP_08170724.1| ## NR: gi|325849307|ref|ZP_08170724.1| hypothetical protein HMPREF9246_0378 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0378 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 132 1 132 132 200 100.0 3e-50 MKKTKKGINILLITCVIVFVILIFSNLRKDKDWYRDFYRGEDIKKYCMYITNDENKDFNK YIETIANDEKIYIRELNIDKVNPKNVDVKIDKNKVPYLIVIDNGNIRKEISLSDKKKSKD NLTEYLDVQLNE >gi|325480140|gb|AEXN01000039.1| GENE 48 47637 - 49262 906 541 aa, chain - ## HITS:1 COG:PAB2147 KEGG:ns NR:ns ## COG: PAB2147 COG1132 # Protein_GI_number: 14520516 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Pyrococcus abyssi # 99 535 100 546 579 153 26.0 1e-36 MYDWREHKKIIDKFILPQIKKIIYLIIVILLGIIASMAIPYVFGNIIDLIVIKDLQLVLK FTLISLFLNIFQSLSSILEEWIGNILSIDCSNSIKEVMFSKILDTRYEFLNSYGEGELVS RIENTGEKIVGFYIELFSSIVMIIFSIIISAYIMIRISLKLFIIAIILLPLTYGINHIFK STIISKQRDYIAKLDAYSDYLIDTISNLTGIKLNNLERIFKGNYKNKLQDLKNVSMSNLK INMTVTSIQDLITIILSSLILFISARLIILGNLTLGNIVAFSSYMEKLHSSIKKIGDLNL SFNEVIVDLERYREIMDHDNEKKIDGKKLSKITSLKFKNVSFKYDDEYILKDFSFEISKP GLYAIVGENGSGKTTIFNLISKLYTNYEGEILINDNEISDIKDEDLRDEVLFIESKPFIL RENLNSNITLLEKNKVDEPYLEKITQFLELERIEKYSTKNLKDTLSKGEQQKIQLARMMI GRYSLILLDEVLSGLDQEIKKKAISKIKEKSKNNIVVMISHDHEIQKICDDIFLMVYKNS I >gi|325480140|gb|AEXN01000039.1| GENE 49 49264 - 49530 245 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|303233506|ref|ZP_07320169.1| ## NR: gi|303233506|ref|ZP_07320169.1| hypothetical protein HMPREF9289_0173 [Finegoldia magna BVS033A4] hypothetical protein HMPREF9289_0173 [Finegoldia magna BVS033A4] # 1 88 1 88 88 117 93.0 4e-25 MKEVGILTQEESENLEELLEKKIALENLLKILSESQEIYKKVNRDYKKIVEEYEKWWRDT SDKYIWESTDNSFWSIDFKSRKVYLVDE >gi|325480140|gb|AEXN01000039.1| GENE 50 49532 - 51721 1282 729 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 23 372 95 442 454 90 25.0 1e-17 MIKNNITYKLGKEINIWKDGLAQTLTFIVTEDCNLRCNYCYITHKSSNKKMSFEVAKKFI DYVLTEEMIRPKGVILDFIGGEPLLEIKLIDQICDYFKLKTYLLNDEWFWDYRINITTNG INYASKEVQDFIKKNQGKLEIAITLDGTKEKHDMHRIFPNGKGSYDEIIRNIELYKNQFQ ASTKVTFSSKDLKYLKDSIIHLWELGISDVAANVVFEDVWQDGDEKTFEDQLIELADYIL ENRLFDKYSCTLFDESIGSPNSREMLETASCGAGKMIAVGPDGSLYPCMRYKDYSLNNKK EIAIGDVENGIDFDKIRPYYLINTQLQSDEECLNCRIASGCTSCFGHNYDSADSNTNFQK AKYICKMHKARVRANNYYFAELYNRYGIEREINNEERDKLYFLLSNSAVRTCTSSEDRSD LSIMSDETIKQGLEYAKNNFLRPVFIHSNYGLNLNFKEIDLKGHNIFHYCSIRNQDSIRK ITNNYILTIEYPNDEEFVKNMKLEENIILNISSDYLSDIENFVTKLFNKTNRINLNILDI DKQFNYTLYENQLKNISDYIYYEYLNKGIIKELNVITDEMFMEEKELCDSGLNSYTLASN EKFYVCPEFYFNFPLDYIGSLKDGIKEKYNRHLYSEKYSPLCNKCSICHCNSCSFENYIN TNEVNIPAKNSCVKSSIEYRVSYELQKKLSKLMEFDIHIKPLNYLDPFVDVLEKNPVNGI LNKKYLEDN >gi|325480140|gb|AEXN01000039.1| GENE 51 51708 - 51890 245 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYSSKLKNNMIGREITPFNVCKLSCTNTCRYSCTAKNAAKHPKYSHSTFNNNLNKDDKK >gi|325480140|gb|AEXN01000039.1| GENE 52 52019 - 52624 557 201 aa, chain - ## HITS:1 COG:SPy1908 KEGG:ns NR:ns ## COG: SPy1908 COG2197 # Protein_GI_number: 15675720 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Streptococcus pyogenes M1 GAS # 1 201 1 201 201 106 39.0 3e-23 MKILLIEDHKMVATSLKMSLETEQSISVDIIDCIEKINTDKSILSYDLLLIDINLTGIEG TVNGLDLAERLIEDYRDIKIVILTAYKLEFYIKRAKEIGCRGFISKEEDTKNLIQYIKSI VEKDKIIFPEENHMLESLTKYELKIVRLYSNGMSRKELAKELNTNVRSLAVSLSRIYQKL NVRNYQEMIDKVRELGYVDSF >gi|325480140|gb|AEXN01000039.1| GENE 53 52596 - 54143 669 515 aa, chain - ## HITS:1 COG:no KEGG:Apre_1851 NR:ns ## KEGG: Apre_1851 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 515 1 515 515 532 67.0 1e-149 MKRKDLILIAHIILQIVLFIPIIPFIKYYQRKDIGIIIIILLSIVNFISYVIKILNSDKK FILKHSILTIIFITFICAEDTILINLQIGKHIELIIYSLLVLENLALICSTYRLSIQKLI ITIILSISALTMNYNYPLSDFIYKYVVILLLMSPSISYILDRKIRHNNRRVILYLQICFI ISFCIYKKINSIENVSISEYLLLSIISMESVLLYKIMITDVRKGLALFIKAMRNLFLGYI VLFVMLYLVGISVVDITLLSFYFFIYLAEFRSYKEYKKHQSVTFDELLDSYYVEIYRNRE IERLNILKIQTFLHDDILQIIIAIRRWIEDNLLGSDKNYILQNLDKLNDLIRHEIDSFNP KIKEYSSLYDAYNKLISDLEDMYLSKQMLIEFECKKDIELSSPYDELVYKCINELLINAF KHSKGYNTNINLKVEKNIIYLTVTNVGDYIKDKDKIKEGNIGLNILRLNLKQYRGVFEYE IFKNNEELEESYVQFKIKIPLDRRVVNENFVNRRS >gi|325480140|gb|AEXN01000039.1| GENE 54 54457 - 55113 790 218 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1699 NR:ns ## KEGG: MGAS10750_Spy1699 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 218 1 218 218 301 95.0 9e-81 MEYKDIRENLEEMMNDNYKDFIKALVSIEKGVNDEKALEEVYVLYMNNDTTGLLSDDFDY MIDDMKEQGKIVENTNELEEKDDLINLVGNIAGKVENLERENANGEKFKVSNFSIVSKDD DGNKVYTNCSAYGDKTKDLENLKQGDFVKIFGQVKTSIDNNGKEHKNVRIFSSKLLKAKE QVKSQYKDKKSILGQIKSFKTDDKAKSNKKDHSKGTER >gi|325480140|gb|AEXN01000039.1| GENE 55 55157 - 62800 7250 2547 aa, chain - ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1046 2339 2 1305 1315 618 30.0 1e-176 MQVNDFKNIQEAIKYEVLQDEKEYLKLLKVIGNNQKYDFSSQLSIYNKEPEARACATFDM WKKYFGRVVMRGQKGIPILVGSDINQRVSYIFDISQTTSTDRNINEVSLWQFDHENHNEA LKEIIRDSSFEASDSLNENIFSLSRIYGDEYINLALADLRIDIEDRLSFEKFMRDSISYA VANRFNTVYPIDMENLKSNFSRINTISLEQIGLVISRVSEDIIDRTIEKSKEMDRARLLT ERSAADYNRDIENINEDRGGQDDLYRRDNRSRSRDGRVFTDGSDRGNSNEDRRENLGHDG EGSGIYGEISESDIRSSKTVLPSRERGHGELEETSENVRGENTFEPSEGNSESGSGLYQE RESQDDESTRIDREDDERESRTIPRTDEQLDGNSEENSNQGIRRSLENEISQEKEADEAS FFDGKNTENGKDYWIVEFNENHELVPDYIGQVVTKDLINVLRQKDIDVKDHNQTLGENEF GEMTDDYIGYFKFYFDHYVDGEVVEHYRIDLGDGEEVNEREFSYLEEQVELSEEKSLQEE VKENIEPKFKIGDQVRYKDKDFTITDFDELSGGLKTVTIRDNMEYMGGMIRGSEVIPYRN DSYLEEIFENLSQTSEKLAVKVGKEFILEDENTFDGITLIETGTKVEVNGEEIPLYKGET FEESRKIDDLLDSGNYEIYKLSEHEKQIGRQVEQESFIDNKNLEIDQMMDRYNVPREAAE NLLRGKEDLKNLGYEPNKERLSFARNYDLKNHIYSEYLTPSEKLDKNIKAIKMLKRLENE NRSPREYEQAYLADYLGWGGLSDVFDEEKGGQWLEARNILKENLTNEEYLNAKESTLTSF YTPREVMDGIYKTLADMGFKTGNILEPSAGVGNFIGNMPSEMKASKIYGVEKDSLSGRIA RELYPEANIQIKGFEETNFSNNFFDLVIGNVPFGDFKVNDREYNRNNFLIHDYFFAKSID KVRNGGIIAFITSSGTMDKKDESVRKYINARCEFLGAMRLPNTTFKGLAGTEVTSDIIFL KKRDSVIERDDDWIHLSTDKKGLTYNKYFVDNPQMVLGDMKEVSGRFGNTITCDEKEDEN LKDLMDLASKEISSNSKYEEIELLEDEELSLPATDDVKNFSYTIIDEEVYLRENSVLIKQ NISDKNKEKIKDYLDVMNALKDVIEKQKDDFSDKEIKESQAKLNEVYDNFSKKHGFINSL SNTRALKEDSNFPLVSSIEILDDEDNFKAKSDIFSKRTITKAKVVDHVDTSLEALVLSVS QKGYVDFEYMESITSKDRDTLIGELEGEIFLDIKDTDLINNRMPFENFNNDDPFHFSYVS ADEYLSGNIREKIGYLNSYIGEIENVIDLAPSEKKDTLLNELGKLKYQREKLQEVMPEEL TASDINVRLGATWIPQKDIEDFTFNLLKTPGYGRWNINVRFSPHTSEWNIEGKSVDSTND LANMTYGTSRVNAYKLIENALNLKDTKVFDQVINDDGSKTSVLNKKETMLASQKQELIKE EFKNWIFEDPDRRYRLEKIYNEKFNSIRNREFDGSNLTFDGMNTEIRLREHQKNAIARTL YGGNTLLAHVVGAGKTFEMVASAMESKKLGLASKSLFVVPNHLTTQIGREFMQLYPSANI MVADKKDFQPKNRKRFIGRIATGEYDAVIIGHSQFEKIPMSKEYQVRHIQDQIDDIVSFI DENKRNRGENFTVKQLEKTKKKLLVRLEKLNDDFKKDDVITFEELGVDKLFIDEAHNYKN LFLHTKMRNVAGIGQSEAFKSSDMYMKCRYMDEMTDGKGVVFATGTPISNSMTELYTMQR YLQYDDLKARGLEHFDAWASTFGETENTFELSPEGTGYRQKTRFSKFYNLPELMSMFKEV ADIKTSDMLNLPVPEANFEVIKTKPTEEQKEILEAISERADAVRNNQVEPTEDNMLKITN DGKKLALDQRLINPLLPDDPNSKVNVCVKNIFSIWDKTKENSSTQLVFSDMSTPKGDGEF NIYDDIRNKLVNMGIPKEEIAFIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNV QNKLIALHDLDVPWRPSDLEQRSGRIVRQGNENDKVNIFRYVTENTFDSYLWQTIENKQK FISQIMTSKTPVRVTEDVDEASLSYSEIKALATGNPLIKEKMDLDNEVTKLKMLEANYKS NKYKLEDKVNKIYPQSILKTEMEIKAVIEDIASVEKLGEGDSKFTSISLGTNKILDKKEA GEKLLEEIKKVKINDSKVIGKYRNLDLQVSYNFMTNTHTFKLLGKAEYFGEFSNSTDGNI TRLDNAIEKMPSRLERLNQNLENYKESLENAKVELTKPFEKADELRDKTLRLAEINKLLD MGEVEELENQSPLLEDLKRAIVDYSNYEFSESNSYEDFDKLYPDLSHIGLAYTETPDGKH SIQYEVNLEEKTWTQYVDNVAIRTESFVEEDISNSQAIKDMTEAIKMSSFDDLVSVDEED LKQALGLEIDDDGNFYDPLAKDLDNDGIPDRYDNDFKDSDYFESTYDVEDNLHAREEKPS ILGQISKFKSEEEKDKNQEKREKGQER >gi|325480140|gb|AEXN01000039.1| GENE 56 62787 - 63752 684 321 aa, chain - ## HITS:1 COG:CAC1222 KEGG:ns NR:ns ## COG: CAC1222 COG0270 # Protein_GI_number: 15894505 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Clostridium acetobutylicum # 4 311 7 303 314 299 50.0 4e-81 MNKVKILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKAKSVVGYK APNEKIDLIMHGSPCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKDMKDKPKWIIWENV KGVLDRNMRDSFFIYLKELESLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFSFNK LERKETRPLSEFLEKDVSELYTMTQPYMLKFLNKGIDNSFRGRLKVIKDFSYTISTKQMR VPNSGIIDIGNGKYRYLTERECLRLMGFDDSDIDKLEEVHPRRKNCTSSKLYKQAGNSIV VDVLMAIIKEIHRTEVGNASK >gi|325480140|gb|AEXN01000039.1| GENE 57 63745 - 64866 1112 373 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 356 205 583 709 191 37.0 2e-48 DSEINLFRKQKYYTVDLSYGGLKLVSDRIDRIEVAEQLLNLLEDEIVITEVEDKNISTKP DKPYDLTTLQREANKYFGYSANDTLNLAQGLYEKKLITYPRTDSRYLTDDMVTTMKELLE GLKEGFKINESNFKSIFNSSKVTDHYAIIPTISGIGKTKDLPEKESKIYNLIKDKLLASC SDNLKESSRKIRYEYDKFNFNASGKTVIDEGYTKYLKTYGKERQENELPDVKTEDKIKLT SKNISEKFTKAPSHYNEDTLLKAMENAGVESLDKDIEVERKGLGTPATRAEIIENLIHKD LIRRDKKNLLVTEKGNRLVSIVEDKFKSAETTSEWEMKLAKISSGEVDKEDFLREIVVSI RELVDRYKNNLNE Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:19:40 2011 Seq name: gi|325480137|gb|AEXN01000040.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00052, whole genome shotgun sequence Length of sequence - 1291 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 469 225 ## COG2801 Transposase and inactivated derivatives - Prom 595 - 654 5.3 2 2 Tu 1 . - CDS 679 - 1245 573 ## FMG_P0157 putative transposase Predicted protein(s) >gi|325480137|gb|AEXN01000040.1| GENE 1 1 - 469 225 156 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 1 155 20 173 216 167 56.0 9e-42 MHELKLFGKRPKEKYRSYKGKVGKIADNLIDRNFKANRPFQKWSTDVSQFNFSWGKCYIS PILDMYTNEIISYDLSLSPNLKQIYNMLTKAFNKFPKLKNLILHSDQGWQYQHKYYINEL KKHGIIQSMSRKGNCYDNSIMETFFGRLKNEVYYGY >gi|325480137|gb|AEXN01000040.1| GENE 2 679 - 1245 573 188 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0157 NR:ns ## KEGG: FMG_P0157 # Name: not_defined # Def: putative transposase # Organism: F.magna # Pathway: not_defined # 1 188 1 188 188 268 88.0 9e-71 MKYSYEFKKECVQLYREGKWADIPEGIKEKIFHDTIRKWFKLEQLHGPEILKHGNNIKWT TDEKLEVVSKVLSGNTIGSVAIEVGINPGQLYSWVNKYKIYGYNGLVNKKKGRKPKNITM KKTNIHKPKKLDESEREELIRLRAENEYIKSENEIIKKEIALREKNYAARLKAKKQQSSK NSKKKATN Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:19:46 2011 Seq name: gi|325480132|gb|AEXN01000041.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00013, whole genome shotgun sequence Length of sequence - 5486 bp Number of predicted genes - 6, with homology - 4 Number of transcription units - 4, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 40 - 132 65 ## - Term 163 - 210 7.1 2 2 Op 1 5/0.000 - CDS 212 - 748 765 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 3 2 Op 2 . - CDS 758 - 1819 1557 ## COG2252 Permeases - Prom 1847 - 1906 10.0 - Term 1874 - 1902 -0.0 4 3 Tu 1 . - CDS 1909 - 2427 868 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 2555 - 2614 6.9 5 4 Op 1 . - CDS 2715 - 2807 160 ## 6 4 Op 2 . - CDS 2879 - 5383 2032 ## COG2898 Uncharacterized conserved protein - Prom 5409 - 5468 12.0 Predicted protein(s) >gi|325480132|gb|AEXN01000041.1| GENE 1 40 - 132 65 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNYELRSYIVTFRLKNELLLNQIYWSKNLI >gi|325480132|gb|AEXN01000041.1| GENE 2 212 - 748 765 178 aa, chain - ## HITS:1 COG:FN2073 KEGG:ns NR:ns ## COG: FN2073 COG0503 # Protein_GI_number: 19705363 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Fusobacterium nucleatum # 1 176 1 177 177 189 62.0 3e-48 MDYYKLEVCGLKRDLPIIQISDNLKIASFVLLGDAELAEKAGIELSKKVDADIILTAEAK GISLAHEIAKNIGEKSFVVARKSEKSYMNHPINVEVNSITTKNTQKLYLDSKDVEKVKGK KIALVDDVISTGESMNALESLVKKAGGEVVQKLAILAEGDAANRDDIIFLEKLPIFEI >gi|325480132|gb|AEXN01000041.1| GENE 3 758 - 1819 1557 353 aa, chain - ## HITS:1 COG:FN2072 KEGG:ns NR:ns ## COG: FN2072 COG2252 # Protein_GI_number: 19705362 # Func_class: R General function prediction only # Function: Permeases # Organism: Fusobacterium nucleatum # 1 353 1 352 355 322 62.0 1e-87 MTFNDVMAALGVVINGIPQALLALSVGFAAFPTALGFAVGVIACTLLHSPIPISMQAETI ALAGSYGENISERLSVVFWAGIIMSILGLTGSLNFIVDLAGVYVLNGMMAGVGLILAKIA IDGLKLETKMVSLISIISALITYFVSGRNLVYTIIISVVISSIYANIMKMEIGKDIKKEE RKLSVKKPILNKKVIRGALSLACLTIGANIAFGNITASLGDGNLTANIDHLTIYSGLADS VSSLFGGAPVEAIISATGASDNPVNSGVLMMAILGVIMFMGLLPKLGKFVPGESIHGFLF VLGALVTVPTNANLAFAAGGDTILVAGIAMATTAASDPFMGLVAGVILKFIIL >gi|325480132|gb|AEXN01000041.1| GENE 4 1909 - 2427 868 172 aa, chain - ## HITS:1 COG:CAC2769 KEGG:ns NR:ns ## COG: CAC2769 COG0652 # Protein_GI_number: 15896024 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Clostridium acetobutylicum # 1 170 1 170 174 247 71.0 8e-66 MDNPIVTFEMEDGKVFKAELYPEIAPNTVNNFISLIKNNFYDGLIFHRIIKNFMIQGGDP EGSGMGGPGYAIKGEFSSNGFENNLAHDKGVLSMARSFMPDSAGSQFFIMHKKSPHLDGE YAGFGKIIEGIEEIDKIANVKTDYNDKPLEDVRIKKVTVDTKGVDYPEVEKM >gi|325480132|gb|AEXN01000041.1| GENE 5 2715 - 2807 160 30 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKAKKCRDKLKEITDKNKIKLLVKDKKLS >gi|325480132|gb|AEXN01000041.1| GENE 6 2879 - 5383 2032 834 aa, chain - ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 241 832 1 589 613 365 34.0 1e-100 MKEKINNFKEIFKKIFLVSVLILVIIQFRKISKEIKVEDIKYIFKNLSIFIIILMGIYGI FANIPASLYDFVLNDELDNDYEKKYIAETGFCINNFNDLLGLGGFISIGLRTAFYGKGHE PSKLVKKIIELLVFLPCGLSFFSILSLISLYFHENPVLERYMILLIGASLYIPIVFGLSF FGKIKFKKKNQIKLFIISIAEWFGVMSAFVVIGYLMGIKFDLITLSTLVVAANIVGYISM IPGAIGSFDLIILLALKSQGIDQELALSWILLYRLAYYIIPFCLAFVFFSKNFTKAFQFK EAGFLKRLFKNITVLFNTFMMYIFGLFMILAATLPDKAYGGGLLTKLNPIRASAIYQFPS ILFGFIFIIMARAYISRQKKSYILNIVILSLVFLYTYITGYSLSTLIYIVIMFVMNLITK DELHTKQFIYASEDRFIDLLLANFMLIVYVGKILKHGSIIDVNISDANDFILIPFEYNFA SIIVTISIIYFLSYLLIRFLQGSRLKIGEKFDRDRYLSLLESQGGSKEAFLAFLDDKDLF WLRKDGLDLACLQIKTIADKVVVMGDPIGNEEHFDELLDEFINQADDLGYNIVFYEINKE ITMKVHEYGFNFMKFGESANVNLEEFNLDGKKKKNLRKTINKIDRDGYKFEVMEKPFDGK TIKRLQEISNSWLGEGKEKGFSLGFFDRNYLNTGDIAVVKNPDGKIIAFANLCPIYYKNW ATVDLMRYDDKVDGLMDYLFINIFTYLKENNIKYFDLGMAPLANVGVMRHSFLQEKMVYM IFKLGDHFYSFEGLKAYKDKYASFWEERYLSYSRGSSLIFSALTLFYVINKKIK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:19:55 2011 Seq name: gi|325480128|gb|AEXN01000042.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00060, whole genome shotgun sequence Length of sequence - 1053 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 193 167 ## gi|227500409|ref|ZP_03930471.1| serine protease - Prom 245 - 304 9.6 - Term 260 - 294 -0.8 2 2 Tu 1 . - CDS 377 - 556 240 ## MGAS10750_Spy1679 phage protein - Prom 588 - 647 7.5 - Term 572 - 613 4.0 3 3 Tu 1 . - CDS 665 - 1051 308 ## gi|325849404|ref|ZP_08170755.1| hypothetical protein HMPREF9246_1987 Predicted protein(s) >gi|325480128|gb|AEXN01000042.1| GENE 1 1 - 193 167 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227500409|ref|ZP_03930471.1| ## NR: gi|227500409|ref|ZP_03930471.1| serine protease [Anaerococcus tetradius ATCC 35098] serine protease [Anaerococcus tetradius ATCC 35098] # 1 64 1 76 2207 81 67.0 2e-14 MNNKRIIKATLIAAMSISFLFNEPSFASSEEEKPLEANNQGLFEENEATVEKKEEAKKEE AKKE >gi|325480128|gb|AEXN01000042.1| GENE 2 377 - 556 240 59 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1679 NR:ns ## KEGG: MGAS10750_Spy1679 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 56 1 56 257 82 80.0 4e-15 MNFDYFYNRQSEMYYFIRLPMVLMKDEIFESISIEAKVLYSYMLKLFANHKINGYISLI >gi|325480128|gb|AEXN01000042.1| GENE 3 665 - 1051 308 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849404|ref|ZP_08170755.1| ## NR: gi|325849404|ref|ZP_08170755.1| hypothetical protein HMPREF9246_1987 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_1987 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 128 1 128 128 209 100.0 6e-53 MKLFDFIFSIQESDTVNRYEDSKVDNLNFRHVNRLSPILTKSIKDEYEDNKYDYRDLLDE IFSYKQFENSDSDILIFDIKYLKHNSSMAFPSILMFKNLPESIEYEITSKHIPEIIKGKI YIKDNISG Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:20:09 2011 Seq name: gi|325480126|gb|AEXN01000043.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00016, whole genome shotgun sequence Length of sequence - 1188 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1187 1316 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 Predicted protein(s) >gi|325480126|gb|AEXN01000043.1| GENE 1 3 - 1187 1316 395 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 395 1 404 407 511 63 1e-145 MSKETFERSKPHINIGTIGHVDHGKTTTTAAITQALNKKYGTGEYVDYEHIDKAPEERER GITINTSVVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREH ILLARQVGVPKIAVFLNKEDQVDDPELIELVEMEVRDLLSEYEFDGDDAPVVVGSALKSL QEGGEGEWSDKILQLMDEVDEYFDIPERDNDQPFLMPVEDVMTISGRGTVATGRVERGTL KLGSTVEIVGLTDKTREVVVTGIEMFHKSLETTESGDNCALLLRGVQRNEIQRGQVIAEP GSVHPHTEFEGQVYVLTKEEGGRHTPFFSGYRPQFFFRTTDVTGDIQLEEGTEMVMPGDN AKFIIKLQKPIALEEGLRFAVREGGRTVASGVVSK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:20:11 2011 Seq name: gi|325480119|gb|AEXN01000044.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00072, whole genome shotgun sequence Length of sequence - 4646 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 2, operones - 1 average op.length - 5.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 196 - 236 5.0 1 1 Op 1 . - CDS 245 - 1198 1210 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 2 1 Op 2 . - CDS 1264 - 1761 469 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 3 1 Op 3 . - CDS 1751 - 2389 588 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Term 2401 - 2427 0.3 4 1 Op 4 . - CDS 2433 - 3164 762 ## Apre_1171 hypothetical protein 5 1 Op 5 . - CDS 3215 - 4375 800 ## COG0628 Predicted permease - Prom 4397 - 4456 7.7 + Prom 4272 - 4331 6.7 6 2 Tu 1 . + CDS 4433 - 4646 180 ## Apre_1174 RNA polymerase, sigma-24 subunit, ECF subfamily Predicted protein(s) >gi|325480119|gb|AEXN01000044.1| GENE 1 245 - 1198 1210 317 aa, chain - ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 1 316 52 335 347 218 39.0 1e-56 MEIKKVTVAGGGVLGAQIAYAAAFHGFDVTIWGRSEGSFERAKPRINKVYETYTKELELA PRYIGAEFPNYPRSFFDDVKDINLEKIEELKKNNEKAYKDLKYTVDLEEAFADADLVIEA IAEKVNEKRAFYEKIKDILKDDAILASNSSTFMPSMLKDFTGNKERFLHLHFANNIHRQN LAEVMGHDTTSKEVIYTVAQFARDIGMYPAIIKKENPGYILNSILVPLLDAALALYGDDI AEPKDIDMDWKIGSGSPKGPFEMIDIIGITTVINVTSTREDAKDPSSPMGKALKKLKERE AKGLKGIETGEGFYKYR >gi|325480119|gb|AEXN01000044.1| GENE 2 1264 - 1761 469 165 aa, chain - ## HITS:1 COG:BH1343 KEGG:ns NR:ns ## COG: BH1343 COG0635 # Protein_GI_number: 15613906 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus halodurans # 2 165 213 376 385 97 35.0 1e-20 MEDDLEVVIFSYLVDSLDKLGLKRYEISNFAKASKESIHNKKYWNIDDYIAFGLGASGFL SNKRYNNTRNFVKYDKAIREARYPIVFEEFIDKDEREKEYIIFKLRESEGINLREFKEKF ACDFLVKYQDVIEKFKDQDFYKLDDNFYFTKKGMSLSNEFYIEII >gi|325480119|gb|AEXN01000044.1| GENE 3 1751 - 2389 588 212 aa, chain - ## HITS:1 COG:CAC1279 KEGG:ns NR:ns ## COG: CAC1279 COG0635 # Protein_GI_number: 15894561 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 1 209 1 207 374 176 41.0 4e-44 MEKVGCYIHIPFCQKKCYYCDFCAYMNVENRVKPYIKNLIKEIKLYQERLNIEIDTIHIG GGTPSYVDAKYIEEIVNEIKKFKIEKIKEFTIECNPNFISKEKLAIYKDIGINRISLGVQ SFDDEVLKEIGRNHTADIALKDIDMIRDAGFDNLSFDLMLNLPRQTYKSVKNELAMVKKI SPEHISWYSLILEEGSRFYALDKKGQARLDGR >gi|325480119|gb|AEXN01000044.1| GENE 4 2433 - 3164 762 243 aa, chain - ## HITS:1 COG:no KEGG:Apre_1171 NR:ns ## KEGG: Apre_1171 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 104 243 1 140 140 253 99.0 5e-66 MDKFQVKILDIKEEYKYVWTYTLEKPDDLNWDEGSSFHLALPGYDETGEVNKKLIHHLSI NTLTSEGNIRFTTKIPIRKSPFKKTLSILKIGDTVTIFKLKSHMSLKRENRPLVALSQGL AMSTIRPLIKRFEEDNTDIPEFISVNVNTKDTHLYESDFENIDGSLLVKYWLDSRSDYLE KIKELANDRSDSYFYVVGSENFLLDTLFVLLEEGISEQAIVIDKDKEKRDIFLQSLENYN IIY >gi|325480119|gb|AEXN01000044.1| GENE 5 3215 - 4375 800 386 aa, chain - ## HITS:1 COG:BH2608 KEGG:ns NR:ns ## COG: BH2608 COG0628 # Protein_GI_number: 15615171 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Bacillus halodurans # 13 354 8 346 352 80 23.0 5e-15 MRNKELYERIFLRTTIIILTILFLLFLAPALLNALMPIILALVIVGLLAPSIRKIDHILP IKHKAVSYLLGTILLLLLLFFLVWFVQFIVNQVSGLVGNIISNWDKIVSSVNTWINDVNS QINLMPDYVSNTIRSGLKSLYEWLGSLQKNAINITFGFTQAFINTSNEIIFFVITFVVAF YIILGDMQNVYDKYHLLIPEKSKNNLSLIRAVFKNSTWNYIKSQLKLAFLCTIIMAIFLF FIGQQYFMPIALILGFVDLLPMIGPIIVLLPWSIIELLIFDNTIKSLGLLIVLTAWTGLR QVIAPKVIGSSADIHPILSVIALYAGLKLFGVMGAILLPVVFIFIVGIYRSGIIDNWIYD YKLFFKYISDTLNIGKRKLDIPDEEN >gi|325480119|gb|AEXN01000044.1| GENE 6 4433 - 4646 180 71 aa, chain + ## HITS:1 COG:no KEGG:Apre_1174 NR:ns ## KEGG: Apre_1174 # Name: not_defined # Def: RNA polymerase, sigma-24 subunit, ECF subfamily # Organism: A.prevotii # Pathway: not_defined # 1 63 1 63 76 96 100.0 3e-19 MDIEKIYRIYFEDVYRFLLSLSKNKDVAQDITSETFLKVINNSKKIENTRNIKAYIFTIA KNTRLYKILCI Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:20:22 2011 Seq name: gi|325480103|gb|AEXN01000045.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00042, whole genome shotgun sequence Length of sequence - 15209 bp Number of predicted genes - 15, with homology - 15 Number of transcription units - 5, operones - 3 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 266 272 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 334 - 393 10.9 - Term 346 - 389 7.2 2 2 Op 1 . - CDS 402 - 1499 1372 ## COG0180 Tryptophanyl-tRNA synthetase 3 2 Op 2 6/0.000 - CDS 1545 - 2654 1401 ## COG1186 Protein chain release factor B 4 2 Op 3 . - CDS 2655 - 5369 3222 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 5429 - 5488 6.2 5 3 Op 1 4/0.000 - CDS 5490 - 5921 666 ## COG0757 3-dehydroquinate dehydratase II 6 3 Op 2 1/0.000 - CDS 5902 - 7389 1662 ## COG0169 Shikimate 5-dehydrogenase 7 3 Op 3 3/0.000 - CDS 7390 - 8619 1276 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase 8 3 Op 4 . - CDS 8606 - 9637 1015 ## COG0337 3-dehydroquinate synthetase 9 3 Op 5 . - CDS 9637 - 9831 190 ## gi|212697031|ref|ZP_03305159.1| hypothetical protein ANHYDRO_01596 10 3 Op 6 . - CDS 9877 - 10443 572 ## COG0287 Prephenate dehydrogenase - Prom 10470 - 10529 10.2 - Term 10503 - 10535 3.2 11 4 Tu 1 . - CDS 10547 - 11077 406 ## PROTEIN SUPPORTED gi|169824099|ref|YP_001691710.1| 30S ribosomal protein S30AE - Prom 11097 - 11156 6.3 + Prom 11106 - 11165 11.4 12 5 Op 1 . + CDS 11193 - 13103 2091 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 13 5 Op 2 . + CDS 13100 - 13975 889 ## COG1295 Predicted membrane protein 14 5 Op 3 . + CDS 13975 - 14667 797 ## FMG_0096 hypothetical protein 15 5 Op 4 . + CDS 14667 - 15207 437 ## COG0212 5-formyltetrahydrofolate cyclo-ligase Predicted protein(s) >gi|325480103|gb|AEXN01000045.1| GENE 1 2 - 266 272 88 aa, chain - ## HITS:1 COG:FN2053 KEGG:ns NR:ns ## COG: FN2053 COG1301 # Protein_GI_number: 19705343 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 7 70 4 67 395 59 60.0 1e-09 MSKSEKKKLGLIPKLLIAIALGTLAGLYLPEWFVRIAVTFSSIFGAFLNFVIPLMIIAFV TKGIADLGEGFRVIIVIEANSYVNIRSS >gi|325480103|gb|AEXN01000045.1| GENE 2 402 - 1499 1372 365 aa, chain - ## HITS:1 COG:SPy2207 KEGG:ns NR:ns ## COG: SPy2207 COG0180 # Protein_GI_number: 15675940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 2 346 3 340 340 394 57.0 1e-109 MKDIILSGDRPTGKLHLGHYVGSLKNRVKIQNEGNYDKMYIMIADAQALTDNFDNPKNIR ENITEVMLDYLSIGLDPNKVTFFVQSYVKELTELTFYLLNLVTLSRLERNPTVKTEIKSK NFETSLPTGFLIYPISQTSDIILFDSNIVPVGEDQEPMLEQARELVRSFNHTYKEIFREP KAIIPENKVCRRLPGIDGSSKMSKSLDNCIYLSDSKKEVKRKVMSMFTDPDHIKVSDPGK VEGNTVFTYLDAFCEDYHFEKYLPEYKNLDQLKDHYRKGGLGDVKIKEFLNKVLEDFLEP IRERRAYYAKDISKLFEIMENGSKEASAYGQNKLKQVKEAMGINYFDDKNLTSELQKKYD QEYNN >gi|325480103|gb|AEXN01000045.1| GENE 3 1545 - 2654 1401 369 aa, chain - ## HITS:1 COG:BS_prfB KEGG:ns NR:ns ## COG: BS_prfB COG1186 # Protein_GI_number: 16080582 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Bacillus subtilis # 3 368 2 366 366 342 50.0 6e-94 MAEIYELREIIKELDKNLKMIGAHLDPDNLFVEIKNIEKETLKENFWDDSQKAQEIMADL SDKKDDYKTFINLKEELKDQSDLIDIIEETNEELDSLVDVENSLNMLKKEISSFKIKTEL DGEYDRNNAYMVIHAGAGGLEATDWAEMLMRMYTRFFERRNFKFDITDLNNEEAGGIKSA TIHIKGSFAYGYLKGERGVHRLVRISPFDSSKRRHTSFASIDIFPELNDDMSVEIDPKDL RIDTYRASGAGGQHVNKTDSAVRITHIPTGVIASSQAERSQTQNKETAMKLLLAKLTQIK EEEHREKIEDIQGNYTQIAWGSQIRSYVFHPYTLVKDHRTNFEVGNVESVMDGDIDGFID AYLANKGSE >gi|325480103|gb|AEXN01000045.1| GENE 4 2655 - 5369 3222 904 aa, chain - ## HITS:1 COG:FN1718 KEGG:ns NR:ns ## COG: FN1718 COG0653 # Protein_GI_number: 19705039 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Fusobacterium nucleatum # 3 857 6 837 869 785 51.0 0 MALLNIFKTFSQKEIANNQKLVDKILALDEDMQKLTDKQLQNKTNEFKERLKNGESLDDL LVEAFATVREASDRVLGMKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVETLPAYLNALDG KGVHVVTVNDYLAKRDQEWMGKVYSFLGLTVGCIIYGLTNSERQKNYNCDITYGTNNQFG FDYLRDNMVIYKDNMVQRGLHYAIVDEVDSILIDEARTPLIISGEGDESTDTYKKADEFI KGLEGRILDPNEDLDQDPFDREFVVEKVDFLVDEKRKSSNLTEQGTAKAEKFFGIENLSD PEHLELAHYINNALKANTTMTRDIDYVVNKGEVMIVDEFTGRIMQGRRYSDGLHQAIEAK EGVEVQSESKTLATITFQNYFRMYDKLSGMTGTAKTEEEEFSEIYNLDVVEIPTNRPIQR VDDVDYVYINENGKYNAIIEEIKKVHATGQPILVGTISIENSEKLSNALKKEKIKHVVLN AKNHEREADIVAQAGRLNSVTIATNMAGRGTDIMLGGNADHMAKQRLKREGISDELLEQV DSFQETDNQEILDARKKYKHYKSLVKPEIDKEAKKVREVGGLYIIGSERHESRRIDNQLR GRSGRQGDPGKSRFFISLKDDLIRLNVGEQISKFVENYNYPEDEPIVSRMVTRSIEKAQT RVEANNFATRKRVLQYDDVMNKQRTIIYNERKQVLYGENMRDSILSMIKDSISQAVYSFT NPQIKPENWEMVALLNHLKSIAIPVELLRFENINDYTQEKLIDYIYQTTLNKYEEKEKQF GEDNMREVERVVLLRVIDTKWMEHIDAMDQMRKEIGVRAMGNDDPVRAYTNSGFEMYEEM TNSIQEETVRLMMGVEIRQNIERKQVLRPDEESVENAESPDQATNRAERRRLKREAKKGN IKGN >gi|325480103|gb|AEXN01000045.1| GENE 5 5490 - 5921 666 143 aa, chain - ## HITS:1 COG:CAC0899 KEGG:ns NR:ns ## COG: CAC0899 COG0757 # Protein_GI_number: 15894186 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Clostridium acetobutylicum # 1 139 1 139 144 150 57.0 8e-37 MRILVINGPNINMLGIRERELYGNKTYKDLIKCIKDYTDDKDIEIEIYQSNSEGQIINKI QEAYKLYDGIVINPAAYTHTSVAILDALKAVNIPTVEVHLTDVDNREEFRKISYVSYFAK KTIKGKGFEGYIEAIDYLKENFK >gi|325480103|gb|AEXN01000045.1| GENE 6 5902 - 7389 1662 495 aa, chain - ## HITS:1 COG:FN0045 KEGG:ns NR:ns ## COG: FN0045 COG0169 # Protein_GI_number: 19703397 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Fusobacterium nucleatum # 101 317 3 221 249 145 43.0 1e-34 MEDIKDIRENINKVDDKIIKLLEERFDLSKKVRAYKISHNKKVYDPIREKEILKKIQEKN PEYGKYFVKIYQEIMDQSKNLQRNDENYGLLGKKLGHSYSKIIHEKIGYYDYQYFEKNQE DLDDFFEKKDFKGINVTIPYKEKVIKYLDFVSDKAKKIGAVNTIVNKNGKLYGYNSDYYG FLYNLKKNKIDVKDKKCLILGKGASSKTVEAVLKDLGAKEVVFLSRRFKPYFKDEKNYRD FEIIVNTTPVGMYPNNGEFLDYIKLDNFKKLEGLVDLIYNPNMTRILIEAKLKNIKYACG IDMLIAQAVKASELFLDKNFDQDLITKIRNSLMKNQLNIALIGMPGSGKTSLGRILAENM KRNFIDLDLEFEKKYGNIEEFFKNYGEDKFRYKESQILKEFSKKTGQIISCGGGIVEKEE NYYRLKENSIIVNVKRDLENLEIEGRPLSKKYDLEFLYNKRKDLYDKFKDFEVYNIDLDK CAKEIEEKFYENISN >gi|325480103|gb|AEXN01000045.1| GENE 7 7390 - 8619 1276 409 aa, chain - ## HITS:1 COG:CAC0895 KEGG:ns NR:ns ## COG: CAC0895 COG0128 # Protein_GI_number: 15894182 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Clostridium acetobutylicum # 6 404 4 421 428 225 36.0 1e-58 MKTDDILIHPSKLTGQIDAISSKSFAHRVLIMAGLSNNSTNIYINEFSKDINVTIDGLKN LGVGIEKNENFVKIIPPEEKIDQATIDMYESGSSLRFFTGVSSHFSKNTKIIGEKRLAQR PNLELINNLRKHGLEISSDKIPYTIKGKLKAGQFEFLENKSSQYITAIMLAASKLKGKTY IKLSEKPESIGYIDITRKVLKDFNVDVKKDKHSYIIENPEIKSPKNYIVEGDWSNAAFFY GANLLGSKIEISNLDENSLQKDREIVEICQKIKECKKEGKELKIDISQIPDLCPIVAILL TYLDKTSYIINGERLRLKESDRLESTSKMLNDLGANCQILGDGLKISGKISGGKVDSFND HRIVMAASIGSLLAKEDIIIKNYKAVNKSYPSFFKTFEKLGGRIKYLGA >gi|325480103|gb|AEXN01000045.1| GENE 8 8606 - 9637 1015 343 aa, chain - ## HITS:1 COG:CAC0894 KEGG:ns NR:ns ## COG: CAC0894 COG0337 # Protein_GI_number: 15894181 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Clostridium acetobutylicum # 9 338 11 351 356 216 42.0 4e-56 MRLRVDLANPYDIDIGENVIEELNTYLKEFYPNSKILVISDDYLYKIHGEKLEKELHRFT FNKYILKNGEKSKSTGNLVDILEFAAENEYRRSDLVIAFGGGVVGDISGLFSSLYLRGLD FIMVPTTFLSAIDSSVGGKTAVNLKAGKNLCGAFYQPKKVFIDTNFLKTLSDYYFKDGLG EAIKYGMIRDRSIFDEISKEKVTKSYKNLPSIIKKCLNIKKDLVKEDEKDYGIRQILNYG HTFAHAIEIKSNFKISHGHAVALGMKIMVKYFYEDFYHGFVKVLKKYDLDYDIDFDTEEI IKICKVDKKSREDKINIIIVKKLGTCEILKIDFNDLRKIYENR >gi|325480103|gb|AEXN01000045.1| GENE 9 9637 - 9831 190 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212697031|ref|ZP_03305159.1| ## NR: gi|212697031|ref|ZP_03305159.1| hypothetical protein ANHYDRO_01596 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01596 [Anaerococcus hydrogenalis DSM 7454] # 1 64 205 268 268 105 92.0 1e-21 MTRVSKIDENLWSELFLLNKEFLINDIDIMIKNLKDLKSELENNDLERLKAQLKRGNDIR KKMW >gi|325480103|gb|AEXN01000045.1| GENE 10 9877 - 10443 572 188 aa, chain - ## HITS:1 COG:CAC0893 KEGG:ns NR:ns ## COG: CAC0893 COG0287 # Protein_GI_number: 15894180 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Clostridium acetobutylicum # 4 182 10 200 286 95 33.0 7e-20 MKKIAIVGLGLMGGSFAKAFIEYSDNIVYGYDINEKTIKDARNLGIKIIYNKNEFKNMDL TIICLNPSSIKNFVKENCKYLSNTVMEISGVKNNLYPYIKDLSKKYFFTYKSIHPMAGRE VYGFESSLKDLYNNASMIYLDDLDDEEISLFKKIGFNKFVKASPKKHDQMISFTSQLCHV ISNAYVLN >gi|325480103|gb|AEXN01000045.1| GENE 11 10547 - 11077 406 176 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169824099|ref|YP_001691710.1| 30S ribosomal protein S30AE [Finegoldia magna ATCC 29328] # 1 175 1 175 179 160 46 4e-39 MKLNIKGKNINVYESLKEEAKEKFDRLDKYFNKEEEMDLKFSTEGNFKKVESTIFLKGGT ILRAEEVNEDFSTGIDKVIDALVRQIRKQKTKLQRNRRSGESIKFESFDKIDEEKEEDPI IKREKEILLRPMSDEEACMQMELLNHDFFLYLDDQDMKTRLVYKRKDGHYGLIIPE >gi|325480103|gb|AEXN01000045.1| GENE 12 11193 - 13103 2091 636 aa, chain + ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 1 636 1 660 660 437 41.0 1e-122 MEKTKINDILKYDFYSNLEISKDQKYLAFLKTNANLDKNKYDSFLYAYDIEKKKSFKISD NKDIGLFIFDKDDNIIYKEKSDDEFDYFYKKDRSMEVGSLDFKIDKNVSFIKDLKNGYFL IKASNKLSKDQLKTQKENSFYKEVTNLPFWFNGSGYIKDKVESLYFYKKDENKLEKIREF ENETLNAFAINKNLDKLALVIGKNDNKLTRLKDDLVFLDLKNKKEKIIIENTFSYYDLFF SSNDEIIFIATDMKKGGINEDAFIFKSDCSGNFEKISPDDFDKSFGNSIGTDARYGSCRS FDFKDDKLYFIVTEKEESKLYSMDLKGELKLEISGCVEDFVIADDNIYYFYITEDRLSHL KDKKNNLILLDNKINSKLGKIHEFFYESNGDKIRGYVLLPVDFDKNKKYPTLLSIHGGPK TELSNIFHHEHQVFANDGYIIIYTNPHGSSGNGVKYSDIRGKYGSIDYQDLMNFTDNAIE KFPQIDKDNMGVYGGSYGGFMTNWIISHTDRFKAANSQRSISNWTSFYGVSDIGYYFGPD QTGANPWDNLEKMWDQSPIKYAKNVKTPTMFIHSDEDYRCPLEQGLQMYTRIKENGVETK MYIFHGENHELSRSGRPKARIKRLEAIKEWFDRYLK >gi|325480103|gb|AEXN01000045.1| GENE 13 13100 - 13975 889 291 aa, chain + ## HITS:1 COG:CAC0485 KEGG:ns NR:ns ## COG: CAC0485 COG1295 # Protein_GI_number: 15893776 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 285 1 276 283 107 29.0 4e-23 MKIKSSNIKKFILNLIERIRDHDLMTLASSLSYYFLSAAIPMLLVLLNLVTKYMKGNEDV VIEFIKLLPDSIRGVILLIVKSILDSGSASTISTITLIFALWSASKGVSKIILAINVAYG LEDDHSMIKNKIFGFLYTFILIFILIFIFLLKIYSNGILRIIEDVLKIVNYSFSLDEFTW LINLISGIIPPIILILGLTLLYKAAPYNNSIKIKFKDAFVGSISTSLMIFITSFGYSFFL NNMSNMSVIYGALAGIIALLVWMLLFSLTIILGAEIIAAYMKTKNNYRRLR >gi|325480103|gb|AEXN01000045.1| GENE 14 13975 - 14667 797 230 aa, chain + ## HITS:1 COG:no KEGG:FMG_0096 NR:ns ## KEGG: FMG_0096 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 230 1 228 228 255 58.0 9e-67 MERYSTIDKKYKREIVLLKARPCRWGKCRFCDYIEDNEINEEKIDQINKEVLKKVTGKYG VLEVIDSASFFELTEKTKKMIKEIVNEKNIHTLFFECHWIYRKKVHEIREYFKNQKIIIK TGVETFDNDFRENYLKKGAGFKDYKEVLKYFDSPCLMVGIKGQTKEMIDRDMKIILNNFP HATVNVFNENSTDVKRDDELVNWFLKKYHDKLKENPKIDYLYNITDFGVG >gi|325480103|gb|AEXN01000045.1| GENE 15 14667 - 15207 437 180 aa, chain + ## HITS:1 COG:CAC1090 KEGG:ns NR:ns ## COG: CAC1090 COG0212 # Protein_GI_number: 15894375 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Clostridium acetobutylicum # 2 172 5 180 182 74 37.0 9e-14 MKNELRRYFINNRKKINSDDKKNWDKKIKEKVIESDFYKNAKSIFIYYSTDDEIDTKKII KEAFLDKKEVYIPKITGKHKMIPVLLKSFDDLIDGKYKIKTSKRDETKEKIDLTIVPGLS FDQNKYRLGYGGGFYDSYIKNHKSFYVGLFYQINKSYKLNFNDFDRKLDLVITDKKNILK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:20:33 2011 Seq name: gi|325480101|gb|AEXN01000046.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00009, whole genome shotgun sequence Length of sequence - 6478 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 69 - 6476 7862 ## PROTEIN SUPPORTED gi|148984022|ref|ZP_01817341.1| 50S ribosomal protein L1 Predicted protein(s) >gi|325480101|gb|AEXN01000046.1| GENE 1 69 - 6476 7862 2135 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984022|ref|ZP_01817341.1| 50S ribosomal protein L1 [Streptococcus pneumoniae SP3-BS71] # 3 1994 73 2051 2139 3033 75 0.0 SDKESEQNKEDVNKDKAPALETSLKEDKSVEKEGKATEVTHKADLNKDLSTEEKKDDIAV EKKDEGRLIYIAEFKDKEAGERAMKEISKLSSTKVLYAYNTIFNGCAIETKQDNLDLIKH IEGISSVERSQKVEPMMNHAREEIGVNEAIDYLKAINKDMIMKFDGRGMVIANIDTGTDY RHKAMRIDDDAKPYMRYKKEDMKGTDKDFWLSDKIPHAFNYYNGGKITVEKYDDGSDYHD PHGMHIAGILAGNDTDKDIAKYNGIDGIAPNAQIFSYKMYSDSGDGFAGDETMFHAIEDA IKHKVDVVSVSSGFTGTGLIGEKYWQAVRALRKAGIPMVVATGNYATSASSSSWDLAANN QLKMTDTGNVTRTAAHEDAIAVASAKNQIVEFDKVNIGGESFKYRNIGTFFDKNKIIRNE DGSKAADKMKFVYIGKGQDEDLVGLDLKGKIAVMDRIYTKDLKYAFKRAADKGARAIMVV NTVNYYNRDNWTELPAMGYEEDEGTTCQVFSVSGDDGLKIWNMIAPANKTEVKRNKKEDF KDKLDQYYPIDMESFNKNRPKLGDEKELDFNFAPDTDKELYKEEVIVPAASTSWGPRVDL LLKPDVSAPGKNIKSTLNVIDGKSTYGYMSGTSMATPVVAASTVLIRPKLKEMLEKSVLK NLEGEDKIDLTTLTKIALQNTARPMMDPTAWKEKSLYYASPRQQGAGLINVANALRSDVI ASFKNVDSAGLVNSYGSISLREIKGDKKYFTIKLINTSDRPLTFKASSSAITTDSLTNRL KLDETYKDKKSLDGKQIVPEIHPAKIKGANITFEHDVFTIAPNSSYELKAVINVGEAKDK NQFVESFIRLESKEELEAMCGGENKTVFQPSLSMPLMGFAGNWNKEPILDKWAWEEGSKS KTMEGYDDDGKPKIPGTLNKGIGGEHDIDKFNPAAVIQNRKDGNTKSLDQDPDLFALNNN QGLFDPSQSESKVARIYPLDNKGETQEVQIERGLTPSPLVLRSAEEGLISIVNTDKEGEG QKDLKVVSREHFIKGILNSKRNDAKGIKSSKLKVMGDLKWDGLIYNPRGREEGANDDNNN QDLETKLRGQFEPIAEGQYFYKFKYRLTKDYPWQVSYIPVKVDNTAPTIVDVDFSDPNKI KLIAKDTYHKAKDKYKNETLFVRDQKDHPEKFEEVANEVWYAGAAIVDEYGDVERNLDVK YAGEGEGRHRKLDAKGNTIYEIKGAGDLRGKIIEVIALDGASNFTKIHRIKFDSKADAKG MISYYLVDPDKDSSSYKKLGEISEEKLKNAISSEENTNNNKAKDEDSKPAEESSVEGEAS LEIDKNISTIREFENKDLKKLIKKKYKEIEDFTTGGMKTVELDYLYDEKGNVKSYEDGSD LEYETEKLDDVKSRLGGVLSPSKDGHFEILGEVNNVSKDAKAYYGNDFKLIEIKASKYDP QTKTLTFDLFANTNDVVDGLSFTGDMNIIVKDKGQTKAKTIIRMPEKKDEAEEASPYASS YGNIIELGEGELTKQKPKDPSKMDTNKMFFDNEKGQYVLNDNMIVRKGYALRVTTFNPGK TDMLDGNGVYSKEVIEKIQNTAPNIKALSQKTIYCDSRNVEDGRSTQSVLMSALDGFNIV RYQVFKFKTNDKGEAIDKDGNIVDDPSKLVLLGKDGKEYLGDDKSNVEAIKEDGAMLFID AKPVDLTMDRNYFNPTKDNKIYVRKPEFYLRGKIGDKGGFNWEMRVNESVVDNYLIYGDL HIDNTRDFNIKLDVKDGDIMDWGMKDYKANGFPDKVKDMDGNVYLQTGYSNLNAKAVGVH YQFLYDTVKPEIEQKEDGNTAIEYEKDKFIKFNVTDKRDGDKAGEIQYKQIFVNGRAYKS LDDIKDIKDNTLTIKFVVKDFANNTSVKEFIFDKESGKLTPKAPEKVKITIDNKENELVK GEDFQLPEYKGEVPEGKGFKGWKVIGKDGKEEIKAQGAFLFAMEDLSVQPDFYELPKEVK EENKQTFDETKKKDEDYSKIWNIICPSDTEEPSDNPCEEPSEVPSENPQIPETNIAHKSE NPKDNQGLVVEVSSKTKKLEGDPSKDDNLVQIPREDKDKEEARENKNQRSDDKSQANNDK APTSTNVKTGVESLSSVVMGLFAASLALFKTKKRK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:20:58 2011 Seq name: gi|325480023|gb|AEXN01000047.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00005, whole genome shotgun sequence Length of sequence - 86954 bp Number of predicted genes - 77, with homology - 77 Number of transcription units - 33, operones - 21 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 51/0.000 - CDS 10 - 2085 2912 ## COG0480 Translation elongation factors (GTPases) 2 1 Op 2 56/0.000 - CDS 2094 - 2651 771 ## PROTEIN SUPPORTED gi|227500362|ref|ZP_03930428.1| ribosomal protein S7 3 1 Op 3 . - CDS 2697 - 3107 632 ## PROTEIN SUPPORTED gi|227500361|ref|ZP_03930427.1| ribosomal protein S12 - Prom 3131 - 3190 5.2 - Term 3134 - 3165 -0.6 4 2 Op 1 . - CDS 3207 - 3980 740 ## COG1737 Transcriptional regulators 5 2 Op 2 1/0.200 - CDS 3967 - 4656 554 ## COG1737 Transcriptional regulators - Prom 4688 - 4747 11.9 - Term 4702 - 4741 5.3 6 3 Op 1 2/0.200 - CDS 4755 - 6080 1840 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases 7 3 Op 2 . - CDS 6131 - 7318 1545 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 8 3 Op 3 . - CDS 7397 - 7726 329 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific - Prom 7819 - 7878 10.2 + Prom 7783 - 7842 9.8 9 4 Tu 1 . + CDS 7917 - 8198 293 ## gi|212695869|ref|ZP_03303997.1| hypothetical protein ANHYDRO_00402 - Term 8189 - 8220 3.2 10 5 Op 1 58/0.000 - CDS 8229 - 11789 4269 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 11 5 Op 2 . - CDS 11800 - 15510 4469 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit - Prom 15629 - 15688 8.7 - Term 15611 - 15645 -0.5 12 6 Tu 1 . - CDS 15758 - 16270 817 ## COG0778 Nitroreductase - Prom 16337 - 16396 11.3 + Prom 16166 - 16225 7.7 13 7 Op 1 . + CDS 16387 - 17103 633 ## Apre_0444 hypothetical protein 14 7 Op 2 . + CDS 17175 - 19097 1782 ## COG3855 Uncharacterized protein conserved in bacteria + Term 19105 - 19148 7.1 - Term 19093 - 19136 7.1 15 8 Tu 1 . - CDS 19149 - 20408 1766 ## gi|325849594|ref|ZP_08170832.1| conserved domain protein - Prom 20434 - 20493 10.2 + Prom 20455 - 20514 9.6 16 9 Tu 1 . + CDS 20546 - 21340 944 ## COG1387 Histidinol phosphatase and related hydrolases of the PHP family + Term 21343 - 21369 0.3 - Term 21331 - 21357 0.3 17 10 Tu 1 . - CDS 21359 - 22393 1017 ## COG0502 Biotin synthase and related enzymes - Prom 22575 - 22634 12.6 + Prom 22417 - 22476 6.3 18 11 Tu 1 . + CDS 22645 - 23511 1315 ## Apre_0438 SH3 type 3 domain-containing protein + Term 23537 - 23570 2.3 19 12 Op 1 . - CDS 23853 - 25487 936 ## Apre_0408 hypothetical protein 20 12 Op 2 . - CDS 25477 - 26202 343 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 26224 - 26283 5.1 - Term 26234 - 26279 8.7 21 12 Op 3 . - CDS 26285 - 27967 2069 ## COG1283 Na+/phosphate symporter - Prom 28088 - 28147 11.9 + Prom 28073 - 28132 15.1 22 13 Op 1 . + CDS 28275 - 28820 398 ## Apre_1096 transcriptional regulator, TetR family 23 13 Op 2 . + CDS 28849 - 30177 1428 ## COG0535 Predicted Fe-S oxidoreductases + Term 30230 - 30266 2.1 - Term 30211 - 30261 8.2 24 14 Op 1 . - CDS 30283 - 30564 339 ## Bmur_1578 hypothetical protein - Prom 30719 - 30778 4.6 25 14 Op 2 . - CDS 30817 - 31152 355 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 31199 - 31258 7.1 26 15 Op 1 . - CDS 31637 - 32116 374 ## MfeM64YM_0819 putative transcriptional regulator - Prom 32155 - 32214 2.5 27 15 Op 2 . - CDS 32221 - 33096 445 ## COG0583 Transcriptional regulator - Prom 33150 - 33209 12.5 + Prom 33099 - 33158 11.6 28 16 Tu 1 . + CDS 33351 - 34259 920 ## COG2855 Predicted membrane protein - Term 34546 - 34582 2.5 29 17 Tu 1 . - CDS 34593 - 35444 683 ## HMPREF9243_1941 transcriptional regulator, MerR family 30 18 Tu 1 . - CDS 35865 - 36482 382 ## gi|325849554|ref|ZP_08170792.1| conserved domain protein - Prom 36569 - 36628 6.8 - Term 36507 - 36545 3.2 31 19 Tu 1 . - CDS 36785 - 37624 779 ## Apre_0343 KilA domain-containing protein - Prom 37658 - 37717 7.2 - Term 38070 - 38104 5.3 32 20 Op 1 . - CDS 38262 - 38720 534 ## COG0286 Type I restriction-modification system methyltransferase subunit 33 20 Op 2 . - CDS 38776 - 38883 239 ## gi|297587128|ref|ZP_06945773.1| site-specific DNA-methyltransferase (adenine-specific) - Prom 38908 - 38967 8.8 34 20 Op 3 . - CDS 38970 - 39674 778 ## Apre_0341 hypothetical protein - Prom 39729 - 39788 12.8 + Prom 39814 - 39873 6.7 35 21 Op 1 . + CDS 39907 - 40686 902 ## Apre_0340 helix-turn-helix domain-containing protein 36 21 Op 2 . + CDS 40745 - 40960 274 ## Apre_0339 putative cytoplasmic protein - Term 41408 - 41469 2.6 37 22 Op 1 . - CDS 41586 - 42440 992 ## Apre_0600 hypothetical protein 38 22 Op 2 . - CDS 42453 - 43019 778 ## gi|325849599|ref|ZP_08170837.1| hypothetical protein HMPREF9246_0106 - Prom 43083 - 43142 11.7 - Term 43441 - 43497 2.6 39 23 Op 1 . - CDS 43527 - 45062 2180 ## COG0519 GMP synthase, PP-ATPase domain/subunit 40 23 Op 2 . - CDS 45072 - 45587 563 ## gi|325849558|ref|ZP_08170796.1| conserved domain protein - Term 45599 - 45625 -1.0 41 23 Op 3 1/0.200 - CDS 45632 - 46444 1002 ## COG1806 Uncharacterized protein conserved in bacteria 42 23 Op 4 . - CDS 46453 - 48087 1901 ## COG0751 Glycyl-tRNA synthetase, beta subunit 43 23 Op 5 19/0.000 - CDS 48147 - 48521 505 ## COG0751 Glycyl-tRNA synthetase, beta subunit 44 23 Op 6 3/0.200 - CDS 48521 - 49396 1023 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 45 23 Op 7 16/0.000 - CDS 49409 - 50167 498 ## COG1381 Recombinational DNA repair protein (RecF pathway) 46 23 Op 8 6/0.200 - CDS 50154 - 51035 918 ## COG1159 GTPase 47 23 Op 9 3/0.200 - CDS 51032 - 51436 594 ## COG0295 Cytidine deaminase 48 23 Op 10 11/0.200 - CDS 51433 - 52251 931 ## COG0818 Diacylglycerol kinase 49 23 Op 11 17/0.000 - CDS 52248 - 52712 504 ## COG0319 Predicted metal-dependent hydrolase 50 23 Op 12 . - CDS 52693 - 53634 1073 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 53664 - 53723 8.8 51 24 Op 1 . - CDS 53735 - 54160 259 ## gi|325849582|ref|ZP_08170820.1| conserved domain protein 52 24 Op 2 3/0.200 - CDS 54160 - 55101 1381 ## COG4864 Uncharacterized protein conserved in bacteria 53 24 Op 3 . - CDS 55101 - 55724 603 ## COG1030 Membrane-bound serine protease (ClpP class) - Prom 55747 - 55806 5.4 - Term 55773 - 55804 3.1 54 24 Op 4 . - CDS 55810 - 58356 2555 ## gi|325849574|ref|ZP_08170812.1| hypothetical protein HMPREF9246_0122 - Prom 58376 - 58435 11.4 55 25 Op 1 . - CDS 58654 - 59670 1296 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 56 25 Op 2 . - CDS 59679 - 60653 1211 ## COG1316 Transcriptional regulator - Prom 60835 - 60894 8.8 + Prom 60686 - 60745 11.2 57 26 Tu 1 . + CDS 60908 - 61732 940 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 61741 - 61781 2.1 - Term 61729 - 61767 5.5 58 27 Op 1 . - CDS 61984 - 62190 136 ## gi|325849600|ref|ZP_08170838.1| hypothetical protein HMPREF9246_0127 59 27 Op 2 19/0.000 - CDS 62180 - 62614 679 ## COG0822 NifU homolog involved in Fe-S cluster formation 60 27 Op 3 24/0.000 - CDS 62614 - 63834 1651 ## COG0520 Selenocysteine lyase 61 27 Op 4 12/0.200 - CDS 63836 - 64882 1154 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 62 27 Op 5 41/0.000 - CDS 64882 - 66297 1908 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 63 27 Op 6 . - CDS 66299 - 67030 225 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 67197 - 67256 9.5 - Term 67188 - 67223 2.1 64 28 Op 1 . - CDS 67264 - 67530 375 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 67691 - 67750 13.4 - Term 67748 - 67774 -1.0 65 28 Op 2 . - CDS 67781 - 69199 1897 ## COG2195 Di- and tripeptidases - Prom 69222 - 69281 14.5 + Prom 69238 - 69297 12.6 66 29 Op 1 6/0.200 + CDS 69371 - 70417 1173 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 67 29 Op 2 . + CDS 70414 - 71793 1612 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 68 29 Op 3 . + CDS 71838 - 72770 1225 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) + Term 72774 - 72814 6.8 69 29 Op 4 . + CDS 72850 - 74094 1609 ## COG3949 Uncharacterized membrane protein + Term 74103 - 74149 9.1 - Term 74492 - 74538 -0.3 70 30 Op 1 . - CDS 74558 - 75844 1455 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) 71 30 Op 2 . - CDS 75920 - 77122 1484 ## COG0793 Periplasmic protease - Prom 77185 - 77244 9.3 - Term 77231 - 77269 5.6 72 31 Op 1 1/0.200 - CDS 77274 - 77858 835 ## COG0693 Putative intracellular protease/amidase 73 31 Op 2 40/0.000 - CDS 77891 - 79075 906 ## COG0642 Signal transduction histidine kinase - Prom 79133 - 79192 4.4 74 31 Op 3 . - CDS 79204 - 79860 662 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 79894 - 79953 7.4 - Term 79970 - 80024 6.0 75 32 Op 1 . - CDS 80065 - 80667 680 ## Apre_1411 sugar-binding domain-containing protein - Prom 80752 - 80811 3.5 76 32 Op 2 . - CDS 80860 - 85353 5342 ## HMPREF9243_0915 putative C protein alpha-antigen - Prom 85439 - 85498 9.8 - Term 85919 - 85974 9.1 77 33 Tu 1 . - CDS 85998 - 86954 1265 ## FI9785_83 putative secreted protein Predicted protein(s) >gi|325480023|gb|AEXN01000047.1| GENE 1 10 - 2085 2912 691 aa, chain - ## HITS:1 COG:BH0131 KEGG:ns NR:ns ## COG: BH0131 COG0480 # Protein_GI_number: 15612694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Bacillus halodurans # 1 691 1 689 692 912 63.0 0 MSRDVSLKETRNIGIMAHIDAGKTTVTERMLYYTGKIYKIGDTHDGTAVMDSMDQEKERG ITIGSAATTCYWDGHRINIIDTPGHVDFTVEVERSLRVLDGAVALFDAKSGVEPQSETVW RQADKYDIPRFCFINKMDATGADFYMSVDTIKEKLKANAVPIEIPIGAESEFEGVVDLVT MESVTYKTEDLGAHPIKGEIPENLKEKAEEYRANLLEELSEIDDTIMMKYLEGEEVSEDE IKAAIRKGTIEKKIFPCLCGSAYKNKGVQALLDAIVDYMPSPLDIPDVQGTDPKDDEKVL QRHPGDNEPLSALAFKVVTDPYVGKLIYVRIYSGTIESGSYIYNATKGKRERVGRILQMH SNKQEEIETGYCGDIVALLGLKNTTTGDSLCVQDDPIILENMEFPDPVISVAIEPKTRAS QDKMAIGLQKLAEEDPTFVTKTDEETGQTIISGMGELHLEIIVDRLLREFKVEANIGNPQ VAYRESITQPAEAQGKFVRQSGGSGQYGDVVLRIMPGEEGAGITFESKIVGGAIPKEYIK PVEEGVREAATQGILGGYPMVDMHVEVFDGSYHEVDSSEVAFHVAGSMALKNAVAKAKPV LLEPMEKVEITTPDEYLGDVMGDVSSRRGKIDGMNPKDGIHILDAFIPLSEMFGYATDLR SKTQGRATYSMQFDHYAQVPESVKEEVLNKN >gi|325480023|gb|AEXN01000047.1| GENE 2 2094 - 2651 771 185 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227500362|ref|ZP_03930428.1| ribosomal protein S7 [Anaerococcus tetradius ATCC 35098] # 23 185 1 163 163 301 91 8e-81 MCTQTALRSFKALWSSTKDITKLVKEGSKVSRKGHIPKREVMPDAKYNDRVVTKLINNVM LDGKKGVATKIVYDAFEIVGETSGNDPLEVFYQALENIMPTLEVKARRIGGANYQVPMEV RPERRQTLGLRWLVNFSRARGEKTMVERLSKEILDASNNAGASVKRKEEMHRAAEANKAF AHYRY >gi|325480023|gb|AEXN01000047.1| GENE 3 2697 - 3107 632 136 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227500361|ref|ZP_03930427.1| ribosomal protein S12 [Anaerococcus tetradius ATCC 35098] # 1 134 1 134 135 248 91 1e-64 MPTINQLVRKGRKTIKEKSATPALGYNFNTLKRRQTKSQSPQKRGVCTSVRTVTPKKPNS ALRKVARVRLTNGAEVLSYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTLDTAGV EGRKQGRSKYGAKKEN >gi|325480023|gb|AEXN01000047.1| GENE 4 3207 - 3980 740 257 aa, chain - ## HITS:1 COG:CAC0531 KEGG:ns NR:ns ## COG: CAC0531 COG1737 # Protein_GI_number: 15893821 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 253 1 253 257 103 26.0 5e-22 MKVNDLIKENYDTLDKKDIKLYSYIMQEKTDFIEKNLKEFSKKSKFNESSIVNFAKKIGL DGYSELKYLIKWEREKIVDFDENEIDYTYNDISLSMNMIKGLNLDGLFESLYNTNKIYLI YTGYIQKNLAEELKRNFLNIGIIAYTLDIKNDLDLLNKNIKRDDILIAISFSGENTILLD FIKKIRKKIILVSITKLSNNKLSQISDYNLSFVSHEVYRYEENTSIRPVSQYYVIVDFLV LKYLNYKSKYKKKQENA >gi|325480023|gb|AEXN01000047.1| GENE 5 3967 - 4656 554 229 aa, chain - ## HITS:1 COG:BS_yfiA KEGG:ns NR:ns ## COG: BS_yfiA COG1737 # Protein_GI_number: 16077886 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 176 1 189 254 80 30.0 2e-15 MKLEELIKKNKEKFTQTDLAIADFLIDNKNDELDLSINELAKKCLTSRTSILRFTQKIGF GGYSEFKYFLKEKDHRKKDQTKKEDKKLNQILESLDKANNIFIYGNGDFEDIIKKSIKSY LKDLGKLAETFQGRDEISTFNKNSLKDSTIFIIDLSDDPNTLELLSLISNLNTKKILITD TYSKSFLGNYTIHIKKLEKNKINSIAKNLEEIEKFFVKYQEYRMKNESK >gi|325480023|gb|AEXN01000047.1| GENE 6 4755 - 6080 1840 441 aa, chain - ## HITS:1 COG:CAC0533 KEGG:ns NR:ns ## COG: CAC0533 COG1486 # Protein_GI_number: 15893823 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 1 441 1 441 441 638 66.0 0 MKKYAITIAGGGSTFTPGMILMLMDNLDRFPIRSIKLYDNDEDRQNIIGNAFDIFMKERH PDIEFIHTLDPETAFSDTDFVMAQIRVGKYEMRSKDEKIPPKYGVIGQETCGPGGIAYGL RSIGGVIEILDYMEKYSPDAWMLNYSNPAAIVAEATRRLRPDSKIINICDMPIDLMYKMA DMVGLKHWKDLDFSYYGLNHFGWFTEIKDKDGNDLMPQIKEHVSVNGFADGIGTAQHLDE SWVETFTKAKDVYALDPETIPNTYLKYYLYPDFVMEHTDINHTRVDEVKEGREKEVFGLC NTITDRGTAEGIDFEIDAHASYIVDLAIALAENTKEVFLLIVENDGAVSNFDPTAMVEVP CIVDKSGYKKICQGKIPQFQKGMMEEQVSVEKLAVEAWIEGSYQKLWQALTLSKTVPSAK VAKLILDDLIEANKDFWPELH >gi|325480023|gb|AEXN01000047.1| GENE 7 6131 - 7318 1545 395 aa, chain - ## HITS:1 COG:BS_glvC_1 KEGG:ns NR:ns ## COG: BS_glvC_1 COG1263 # Protein_GI_number: 16077887 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Bacillus subtilis # 3 314 139 450 452 314 50.0 2e-85 MGMMGALLISGLAIFLHNKYFDTRLPEWLGVFRGSAFVVGLGFIVMIPAAVLACLVWPKI QMVISGFQGFVTSAGGLGVWVFILLERLLIPFGLHHLLYAPIYYDSVLVSGGIYAAWAKQ LPELAASTKPLLDLAPYAAFTSTGWSKLFGCAGIGLAFYKTAKPENKKKVAGLMIPVVIS AIMCGVTEPIEYTFLFIAPPLFIVHAILAACLSTVMYYLGVVGVFSGGAIEMASLNWIPL MANHWSTYLKMLVVGIIAIAVWYFVFTFLIEKFDFKTPGREVESNVKLYSKKEYRGKKGG AKAEDATKVDAKDEFEVMADEILIGLGGAENIKDFTNCVTRLRVNVNNPEKVMENDYFKQ IGTYGTSRNGKSVHVIVGTNIQYVADEFGKILENE >gi|325480023|gb|AEXN01000047.1| GENE 8 7397 - 7726 329 109 aa, chain - ## HITS:1 COG:CAC0532_1 KEGG:ns NR:ns ## COG: CAC0532_1 COG1263 # Protein_GI_number: 15893822 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 1 109 1 109 453 135 62.0 1e-32 MMEKIQKFGGAMFTPVMLFAVSAVLIGFGILFTNEQILGSIAAEGTFWRGFWDMVLSGGW TVFNQLPLLFAVSLPIGLANKQNARACMESLVIYLIFNYYVASILGTWG >gi|325480023|gb|AEXN01000047.1| GENE 9 7917 - 8198 293 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695869|ref|ZP_03303997.1| ## NR: gi|212695869|ref|ZP_03303997.1| hypothetical protein ANHYDRO_00402 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00402 [Anaerococcus hydrogenalis DSM 7454] # 1 93 6 98 98 136 97.0 5e-31 MNTNDNIRDYILSLPCAASLILLVQYLAYFYIYKNNQADSFKRSLVFAIGFFIVSSLLAK VQKVNISLKDIKYKKLTTIFLLVFVVLNIINAI >gi|325480023|gb|AEXN01000047.1| GENE 10 8229 - 11789 4269 1186 aa, chain - ## HITS:1 COG:CAC3142 KEGG:ns NR:ns ## COG: CAC3142 COG0086 # Protein_GI_number: 15896391 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Clostridium acetobutylicum # 3 1158 2 1161 1182 1485 63.0 0 MSELQEFGAMRMKIASPERIRSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTKDYEC SCGKYKRIRYKGVVCEKCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSKMGLLLDM SPRVLEKILYFASYVVINPGETEYYEKQELSESEYSEALDNYPDDTEFQAEMGAEAVKKL LANMDLKKEYESLMKELEDAKGQKKVRISRRLEVVDSFLTSGNKPEWMILDVLPVMPPEL RPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDIGAPEIIVRNEKRMLQEAVDALIDN GRRGRAVTGASNRNMKSLSDLLKGKSGRFRQNLLGKRVDYSGRSVIVVGPNLKFNQCGLP QEMALELFKPFIMNKVVEKDLAHNLKSAKKMVEKKDPRVYEILEEVIKDHPVLLNRAPTL HRLGIQAFEPVLVEGKAMKLHPLACPAFNADFDGDQMAIHLPLSNEAQIEARLLMMSTNN ILGLKDGKAITTPSQDMVLGAYYLTTIKEGAKGEGMIFEDISEMKKALLNHNVTLQTKVG VRIRKDENDPGKIVNSSVGRFIYNEGIPQDLGYVNRKEDPYSLEVDQVTSSGVLKEIVDR CFRKHGNIKTASVLDYIKSTGYKYSTLSGLTVSMSDVTIPHQKWDIVSKADSEVDKYEKL YRRGFITDNERYEKVIDIWREATDEVTAALLDELKSDNNIKIFADSGARGSTNQIRQLGG MRGLMSRADGKIIEIPIKANFREGLSVQEYFISTHGSRKGLTDTALRTADSGYLTRRMVD ISQDVIVTEDDCGTDGYVIAREFKDGNELIENLYTRIVGRTSFEDIFDNDGELIVGKNQI IDEDKADNIVASGIKEVKLRSVLECKSKHGVCEKCYGRNLATGKKVNIGEAVGIIAAQSI GEPGTQLTMRTFHSGGIAGVGITQGLPRVEELFEARKPKGLAFIAENSGTVSLIQNEKKT DVEILSEDGYSKKYNIPFGARLLVSEGDVVEKGQQLTEGSLDPHDVLKVLGKVGVQDYIT KEVQKVYRLQGVEIDDRHIEVIAKQMLKKVKIEDAGDTEFLPGSLQEIREVRIVNEQMEK EGKKPCEYSQQLLGITKASLATESWLSAASFQETTRVLTDASIKGKVDDLKGLKENIIIG KLIPAGTGMKVYNDFDINYENKDLEDAQIQMNIEEIENREKEALNE >gi|325480023|gb|AEXN01000047.1| GENE 11 11800 - 15510 4469 1236 aa, chain - ## HITS:1 COG:CAC3143 KEGG:ns NR:ns ## COG: CAC3143 COG0085 # Protein_GI_number: 15896392 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Clostridium acetobutylicum # 4 1236 3 1230 1241 1538 62.0 0 MQYHKELFGKTERVSFSKFPQVLDLPNLLKVQKDSYRWFIEEGLGEILEDISPIEDYNGN LILEFVGYDFDDETKYTIEEAKYKDTTYSRDLKVKARLINKETEEVKEQEVFMGDFPMMT DSATFVINGAERVIVSQLVRSPGVYYASELDKSGNKMYSSTVIPNRGAWIEFDTDASHTV NVRLDRTRKLPATTLVRALLFENDEEIIEALGDTEHLRNTLEKENSETSEEALIEIYKKL KPGDPASLESAQNLINNLLFDDRRYDLAKVGRYKYNKKLALHDRLIDQISAKDVIDDETG ELFVKAGEMIDRQTALNIENSGINVVDVIVKQENGEDKELRICGNHFVYLDSFEELEEID LSNIELSEKVYYPVMREILDDNEDKESIINEIERRKKELCPKNIVKSDILAAVNYQFNLF EGIGDVDDIDHLGNRRVRGVGELLQNQFRIGLARMERVVRERMTTQDPDLATPQGLINIK PVTAVIKEFFGSSQLSQFMDQTNPMSELTHKRRLSALGPGGLSRDRAGVEVRDVHDSHYG RICPIETPEGPNIGLITSLTTYARINKYGFIETPYRKVGKDGYVTDEIDYLTADIEDDFI IAQANEPLDENNRFINDRVSGRGINGENDIYPRESVEYMDVSPQQIVSVGASLIPFLEND DSTRALMGANMQRQAVPLLKSQAPIVATGIEHRAAKDSGVCVVSKNAGEVVYVGDEKIRI KRDSDGEIDYYRLLKFRRANQGTTINQRPIVKLGDHVDANEIIADGPSTEQGELALGKNI LIAFTTWEGYNYEDAMLLNEQLVMDDVLTSVHIEEHECEARETKLGAEEITKDIPNVGDD MKKNLDENGVIRIGAEVKSGDILVGKVSPKGETELSPEERLLRAIFGEKAREVRDTSLTV PHGESGIVVDVKEYNKKDGDELSPGVNKVIRVFVATKRKIMVGDKMCGRHGNKGVVSRIM PREDMPFLPDGTPIQICLNPLGIPSRMNIGQVLEVHMGLAARTMGWKIATPVFDGALDTE IEEALEEAKKTAPYVNKTGKIRLRDGRTGEEFQNPVTVGVMYMLKLHHMVEEKIHARSIG PYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEMLTVKSDDVTGRVKTYESIV KGENVPEPGTPESFKVLVKELQSLALDVELLDEDGNVIELKENIDEQDKFSDVEKIDASK IRSQSKKLSGVNLSKLEDKKVESTDSTNEGVEELED >gi|325480023|gb|AEXN01000047.1| GENE 12 15758 - 16270 817 170 aa, chain - ## HITS:1 COG:FN1223 KEGG:ns NR:ns ## COG: FN1223 COG0778 # Protein_GI_number: 19704558 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 2 152 3 155 175 66 30.0 2e-11 MEFDKVIDKRVSTRAFLDKKIEKKDLEKIVEAGVKAPVGKSQYENMAITVITNKEFINEI LEEAREIVNDPKANPIYSAPYLIIISAKDGHVTRLEDTACIIENMSLKATDLEIGSCYIR GMFERFDKKARFIEKLNIEKDFYPVHGLILGYPKEELKGKNHSIKTNYID >gi|325480023|gb|AEXN01000047.1| GENE 13 16387 - 17103 633 238 aa, chain + ## HITS:1 COG:no KEGG:Apre_0444 NR:ns ## KEGG: Apre_0444 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 235 1 247 247 75 27.0 1e-12 MKKISKFFLRLASIYYLFISLGLFLISLFSLFVDRKYVFAIFDLLGFSNISLEIIKPISF VMLFLIFLIISNITFKIFKSIKYKENYLFDIFTGFFFIFVSVIGHVLIRDRIFIIAYVFN FILIVGAMLALKEKSDTYYDNEEDENKEDEYITFSDSNEDSNKDHEDSEDIVKKDELQSF DDLNEKENDNQEDKDTNPKEEIKEEKESDKNKDQEDLEDSKDKIDKDEIRENTKELDS >gi|325480023|gb|AEXN01000047.1| GENE 14 17175 - 19097 1782 640 aa, chain + ## HITS:1 COG:lin0825 KEGG:ns NR:ns ## COG: lin0825 COG3855 # Protein_GI_number: 16799899 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 636 4 647 653 519 42.0 1e-147 MNEKYLDILRENYPSRTNLVDELISLNAKLYLPKGTEYFFSDLHGEAKAFIHLLRSAAGN IRDKTRQYFGDTLVKKDQDDLANLIYNPQKELLRLKEENIIDNDWYTINIHRLVNLFRFV STKYPKETVKEKFPTNYREIIDELLYTNDSEFNKKLYYEKIIENIIKYKSADDFIIVLST LIQRISVDSLHIVGDIYDRGPSAHIIMDELISFPSVDIQWGNHDMEWMGACAGNKALVAA CICSSISYNNFDFLEEGYGINLRPLYEFSMKTYRDDPCLCFMPKVFEENIYDKVNKDIAA KMHKAMSIIRYKLDSQLLDRNPEFNMEDRNSLKFIDFSNMTYKKAKLLDTNFPTIDPKNP SKLSPEEEYIIDILQKEFSKNIILNKHIKFIYENGSMYKKSNGSLLFHGCIPMDKDGNFQ TVTIKGKSYKGRAMLDIFDKLARDAYFSKDPSEKLFAQDICWYLVCGKKSPIFGKSQYSY FENSLVDDKDLKKEEMNPYYDLNKKEEICDKILDEFDLKSERRRIINGHVPVRVKEGKKP VRANGKLYVIDGGISKPYQKKTGIAGYTLMYNSHHLALAEHLSYTNIRDNMGSYTPKIYE TEKLIPRMLIKDTDQGQKIKSRIEVLTELLQVIDEGKNFK >gi|325480023|gb|AEXN01000047.1| GENE 15 19149 - 20408 1766 419 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849594|ref|ZP_08170832.1| ## NR: gi|325849594|ref|ZP_08170832.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 419 1 419 419 500 100.0 1e-139 MKKSNKILALGLGLSLIFAPATSLVSNNINLVYAEESQEKQEKEVSPEEFVAYANEFVDS DEFKALDEKDQKTYKELIKDLTAENLDKDKFNEINEKIDNIKLSYYKDKYDKLKKELDGL KADNLSDDLKEEVESYEDSYQTHEEYSKAVDKIENTIKSIEIYNKDLKSHKDVLKKAIEN NKDFKIDLNNEKAVLENKNAKLDEVDKAIDSLNNKIDAYNEEIRLSNMAKLKKIMDGEKS TKESTNYKKASKAIREDFDKKIQAVKDAHGKLDKKEKVENVDEIISNYNSAFDKLDGDKN LEAYNKLVTYYNENKDKLSKEDQKKYEDLIEKLDKSEDFSMDKINELKTQIEKAIKDDED SATLKKVGAKKIGVQKSSGPKVKRSRSFVRTGVKSVGIVLIVLVVAGLAYFFVAKKDKK >gi|325480023|gb|AEXN01000047.1| GENE 16 20546 - 21340 944 264 aa, chain + ## HITS:1 COG:L37351 KEGG:ns NR:ns ## COG: L37351 COG1387 # Protein_GI_number: 15673198 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Histidinol phosphatase and related hydrolases of the PHP family # Organism: Lactococcus lactis # 3 258 5 259 269 108 31.0 1e-23 MQDLHLHSSFSFDSSADPEENVKQAIKNDIKIMAFTDHDETFCKHDQTLNFDLKKYFSTI DTLREKYQGQIKILKGIEIGLGPDNADKINEFIDKNDFDFVIGSIHAMDFQDIWQNRKNI EKDPKYHFRKYYQCMLESVNKCNKFNILGHIDFIDRFIKDKNVIPEFSFYSDLIDEILKE IIKTNRGIEYNTAGFRNNLPHANPKDEILKRYKELGGTTITIGSDSHFNDTVSYKIYDGI DHLKELGFGHLSYFENKKEKIIEI >gi|325480023|gb|AEXN01000047.1| GENE 17 21359 - 22393 1017 344 aa, chain - ## HITS:1 COG:CAC1631 KEGG:ns NR:ns ## COG: CAC1631 COG0502 # Protein_GI_number: 15894909 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Clostridium acetobutylicum # 8 334 16 339 350 293 45.0 4e-79 MSFVKAENFTDQRLLELISDDKYNEYLAKKADKVRQEIYGKDVYVRGLIEFSNFCKNNCY YCGIRKSNLNVERYRLSFDEIIMCAKIGYKLGYRTFVLQGGEDLKFKDEDICKIVEEIKK IHPDCAITLSIGERSKEAYRSFFNAGADRYLLREETSNKNHYYKLHPKEMSFENRRKALF DLKEIGFQVGGGFMVGSPYQKDEDLISDLRFLQELKPDMIGIGPYLSQHDTPFKDMENGS YKKTLRLVSILRLMFPYCLIPATTALGTINPFGREEGLKAGANVLMPNLSPNSYRELYSL YDNKICTGDEAAECRNCLELRIKKAGYNIVTHRGDVSEYKKMYE >gi|325480023|gb|AEXN01000047.1| GENE 18 22645 - 23511 1315 288 aa, chain + ## HITS:1 COG:no KEGG:Apre_0438 NR:ns ## KEGG: Apre_0438 # Name: not_defined # Def: SH3 type 3 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 288 1 289 289 191 45.0 5e-47 MTNLKKYALAAAIVIPTIFTASNKAEASVAVKDANKAKVVNVRENAGTDSNVIGGINDHT AYQVIGSENDWLKINYNGKEAFVAGYLFNVTEEAKVLSPANFRSSDDLNSEIYQVLNAGD VVEVKEIAKNGYVKVAFEGKEGYVYSNLLEVSDHIINNAMGNVEAAKTENKNQKVGQNNT KANTQASSQTYQQPAQTYQQPAQTYQAPAQATYTANNSSAKQIIAQRESGGSYNARNGQY IGKYQLSSAYLNGDYSPANQERVADQYVAQRYGSWDNALAFWNNNGWY >gi|325480023|gb|AEXN01000047.1| GENE 19 23853 - 25487 936 544 aa, chain - ## HITS:1 COG:no KEGG:Apre_0408 NR:ns ## KEGG: Apre_0408 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 544 4 553 553 169 28.0 4e-40 MKNKRLKVIFKKFFKEEISKYLPGTKVYGLSNDYNLRVLYLLLMYGFYTIIGLSTFAFLA FFYLSKNDEFSYFTSGSLIISVFLLIACAVDLISDYSKSKDINILMTMPIKDEEIYLSKF LAIILSKFEIFYFYILMIGVYLFNMGFSFTRILGQIINVFPIFVTSLAIISIPIMLIMRF SNIRNYKTIFKFIGYGLALFGLGFIYFSAFAKEGKSASIISNLMKIFVKHSGKASCLFFH TRLYGKSLSGNVGDFFLYSFLLYLYSFIILFILSRLASKIYLDSLTGNEQVKIHKKSKNL SYKKSSTIHAIYKKDIRTILKSPVYLFPVLSSIIMLTILWGFGSSGLFELIKEVNLKNKE IYLFIILGSFVFRFFVSANDIGINSSLSREGDSLYQTLTLPISPKENVLARALSINTVNF LINLSLTIVLSLITKINILAAISIFIGFSLSSLISSLQGLLMDASSINIHWEKERDLTRG SSQNIGYYIVEGFILIIVGAISFIIYQFTNIYLVFLFIMALIVLTIVFLYKKVIKKYQEG FFDL >gi|325480023|gb|AEXN01000047.1| GENE 20 25477 - 26202 343 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 2 227 5 230 305 136 35 3e-31 MLEVKNFTKKYKNGKLAVDNISFDVNNGEIFGFLGPNGAGKSTTIKAIVGLIKKSRGEIK IDGIKLEDDPLLYKNKFSYLADNPDLFDKFTGVEYINFVADIYGIDEKTRNERLNTYLDY FDIREAMADLILSFSHGMKQKLAIISSLIHDPDLLILDEPMVGLDPKSSFNLKKIMRERK EAGKMVFFSTHIMEVAENICDRIAIISNGKIVAQGSLDQIRESLDEDKSLEELFLELTDE K >gi|325480023|gb|AEXN01000047.1| GENE 21 26285 - 27967 2069 560 aa, chain - ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 16 543 14 539 543 354 39.0 3e-97 MQLSALSTLQWNLIAGGLAIFLFGINLMGDALTNFAGPKLRGYVEKYTSNPIKGVLVGIV ITGLIQSSSATTVIAISFVRAGVMSLEQAIGVILGANIGTTVTAVLIGFNLDYLSYFICL IGVGIFLFSKKRKGKYIGEILIGFGLLFIGLKMMGDSLSELKNIPGFEEIVTDLGKNPII AVLVGAVLTALIQSSSAFIGIVQSLYASGAIGLNLSLGFLFGANIGTCITGILASLGGSL SAKRTSLFHVLFNVIVSTIFLLILVPYEGFISFVANKFSLNPMMTIAVGHFSFNFVGMIL FVPLIKQVSIVLHKIIPGKDSIFSDVSDIDLEESLINTFPAAALDQAKTAIIKESKIALE TIKASRNYLNSRDKNDLSTVNQAEALVNEMDTKIQKYILDISKSNLVSELEGDIHNYLQV QINVERVSDLAQNLGEYFDEINEAGEKYNEGALEDLNKIYDLVINNYVNSIEVFESEDMT LYQTLKEDEANLDLLEQNLRRSHYKRLTEGEKISTVASSVFVDIASTIERIGDHAFNIAR ITVDPVKVHDEYEKQIVTIE >gi|325480023|gb|AEXN01000047.1| GENE 22 28275 - 28820 398 181 aa, chain + ## HITS:1 COG:no KEGG:Apre_1096 NR:ns ## KEGG: Apre_1096 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: A.prevotii # Pathway: not_defined # 1 179 12 190 192 207 62.0 2e-52 MELFSTYGYSDVSMEKIAKEVGIKAPSIYKHFKSKKTIFETILKDAVIKIDQKIDDVEDY KIMKNNHKTLNIEKLSIDIFKYLLHDPFVSKVRKMLSIEMYKNPQAMQFYVEKFIHNPMT KQQKIIDYYGLSKFGDLEVLSTIFYSPILLAVKLYDADPEKEDELINLLKNSYKQLEKII S >gi|325480023|gb|AEXN01000047.1| GENE 23 28849 - 30177 1428 442 aa, chain + ## HITS:1 COG:CAC2791 KEGG:ns NR:ns ## COG: CAC2791 COG0535 # Protein_GI_number: 15896046 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductases # Organism: Clostridium acetobutylicum # 12 440 16 446 461 304 37.0 2e-82 MNINNKVKTYGVEKTLKYVHKNPEKNLKNAIDLAKKISPNDYRSQIETIDKVISDPDDVF HEYILNMLNTIDPDVFDKTVINFLLNSVLFSEDLKKESREKYNCNIPWTILLDPTTACNL KCKGCWAAEYGNSLNLSYEQIDDIISQGKELGIYFYIFTGGEPLVRKKDILKICEKHNDC EFLIFTNSTLIDEEFIDEMLRLKNIVPAISVEGSEFTTDARRGDGIYNKVIKSMKLLKDN KLPFGISCCYTSQNYKSIISEEFVDEMIEKGALFAWYFHFMPVGKGTGKELLPKPDQRKH IYHQLRKFRKTKPLFFLDFQNDAEYIGGCIAGGRNYLHINANGDLEPCVFIHYSDSNIKE KTLVESLQSPLFMAYHDGQPFNENMLRPCPMLENPNLLRDMVKKSQAKSTDILEKENVDD LCDKCEDYAKDWKPVADELWNN >gi|325480023|gb|AEXN01000047.1| GENE 24 30283 - 30564 339 93 aa, chain - ## HITS:1 COG:no KEGG:Bmur_1578 NR:ns ## KEGG: Bmur_1578 # Name: not_defined # Def: hypothetical protein # Organism: B.murdochii # Pathway: not_defined # 1 92 1 93 95 80 51.0 3e-14 MKFVYIIMGPFDPKIDRKAIGKNENAEIIGVRNLKEAKEVCKSLIGIADVIELCGAFEKE GSREIIDATDGKIPVGFVTHLDFQNDLFDELFS >gi|325480023|gb|AEXN01000047.1| GENE 25 30817 - 31152 355 111 aa, chain - ## HITS:1 COG:NMB0835 KEGG:ns NR:ns ## COG: NMB0835 COG0610 # Protein_GI_number: 15676731 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Neisseria meningitidis MC58 # 1 111 726 836 921 99 48.0 1e-21 MQDMKSVYVDIRDNISKPNGKGNSDGIQIDFSDVEFQIDLLKTDEINLDYILTLILEKSK ENKDIENLKSEVRRVIRSSLGTRAKEDLVMDFINKTDLSKLKNNDDILEAF >gi|325480023|gb|AEXN01000047.1| GENE 26 31637 - 32116 374 159 aa, chain - ## HITS:1 COG:no KEGG:MfeM64YM_0819 NR:ns ## KEGG: MfeM64YM_0819 # Name: not_defined # Def: putative transcriptional regulator # Organism: M.fermentans_M64 # Pathway: not_defined # 20 120 337 438 444 71 40.0 1e-11 MISFSNIINLDIRTKSDFEIEKYVKDVFEIESNYISSTIPFEQEVIDQIDNKNVGLNVGL NKTEKKVIELLIENPSLTSIELAEKIGVTKRTIERSFKSLQEKNMIERIGSKRDGNWIVV RQAKYISKLKLIVVHCYNILNDFTIEIIKDIIFSYNKRN >gi|325480023|gb|AEXN01000047.1| GENE 27 32221 - 33096 445 291 aa, chain - ## HITS:1 COG:CAC0093 KEGG:ns NR:ns ## COG: CAC0093 COG0583 # Protein_GI_number: 15893389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 6 258 5 257 290 117 32.0 2e-26 MLDFRIESFLEVCKYMNFTRAAESLNITQPAISTHIKYLETYYNCKLFYRNKRNLCLTDE GKILKSALLSMSNDQDKLKMILSEKKTKSEKISLGFTRSVGEYLILDKLISLIKEKPSCD FHIYYENTDEILSDIDSGRIDFAIIEGFIKSSDYFIKKYKSDRIVCISHKDHKFKKQVKK LTDLLDERIIIREDGSGTLDILKNFLSMDNIDTKDFANIIEINNMRSIVEMLKSDCGISF IFESCVKKELEEGILMVMDLEDFNLVHDLSLVASKNSIFTDLYLQIAETFY >gi|325480023|gb|AEXN01000047.1| GENE 28 33351 - 34259 920 302 aa, chain + ## HITS:1 COG:FN0533 KEGG:ns NR:ns ## COG: FN0533 COG2855 # Protein_GI_number: 19703868 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 6 302 44 346 346 268 55.0 8e-72 MALGQIIKDKKPYIGGVRFTSKKILQYSVILLGFGLDLGIVLKTGKESLPIILSTISTSL IIAYLAYKSGLIKGHIATLVGVGSSICGGSAIAAAAPVIDADEDEIAQAISVIFFFNILS AILFPSLGRMIGFSTTDGHAFGIFAGSAVNDTSSVTACASTWDTIYNLGSQTLDKAVTVK LTRTLAIIPICLGLALIKMRNANQEDNKKISIIQIFPFFIIYFILASLITTIALAKGVNI EFFKLFKDLSKFFIVMAMSAIGFNSDIVKLLKSEAKPLALGGVCFIAITSITLILQKVLG IL >gi|325480023|gb|AEXN01000047.1| GENE 29 34593 - 35444 683 283 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1941 NR:ns ## KEGG: HMPREF9243_1941 # Name: not_defined # Def: transcriptional regulator, MerR family # Organism: A.urinae # Pathway: not_defined # 1 274 1 273 280 231 48.0 4e-59 MLRSEIQKETGLTRKAIEYYEDKGLIHPQKSENGYRDYSTKDLEILKKVSIFRKLGMSIS DIYQFIYSGGDSLSSVLREKQHQLDLDEKRKEILEMIVKGESDELINEKVWLLEMKETIY EKLEIAFPGYFGQMLFAAYQPFLNEPLEYDDKNSFYKYIDYLDMLPSFELTEEEKKYIEK LSSPFDLKTLKDVNQAKLDAVENPEKWMKDNEDAISSYESYKNSEEYQNSFMKQIQEKLK NFMKENQYYEIAIPLIRKFSKSYDNYYKKLLKANEQYLNNKYQ >gi|325480023|gb|AEXN01000047.1| GENE 30 35865 - 36482 382 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849554|ref|ZP_08170792.1| ## NR: gi|325849554|ref|ZP_08170792.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 205 1 205 205 372 100.0 1e-102 MTSDWAMVFITLVYVIATIFICWANFKSAKVSKEQLIEMQKQFEENNRPYVEVEFIFVKR AFYGLRFINNGNVVAKNVSIKLSSDFIDNLEISMKEMLIKQEGKKCIIGAHQSYDLYLGT CEYLKKNCKVPANGKITYFAKGEEYEETFSVDLENYMTIFSVNSDYEDMLEIIKKQNSIL KEIKQSVDNLGSNIMRITNKENEDI >gi|325480023|gb|AEXN01000047.1| GENE 31 36785 - 37624 779 279 aa, chain - ## HITS:1 COG:no KEGG:Apre_0343 NR:ns ## KEGG: Apre_0343 # Name: not_defined # Def: KilA domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 279 1 279 279 425 81.0 1e-117 MSKINKEQISAKGFLIQVYTEDFKNDYISLTDIAKYKNTDDPRFVIQNWMRNRNTLEFIG LWEVLNNPNFNRVQFDTFRNEAGLNRFTMTPSKWIESTDAIGIVSKAGRYGGTYAHSDIA MEFASWLSPEFKLYIIQDYKRLKEDENSKLSLTWNLHREISKINYKIHTDAIKEYLLKDL TDEQLSFKYASEADMLNVALFDKRAKQWREENPDLKGNMRDYASLNELLVLANMESYNAI LIEKGLEQKERMIELRNLAKTQLISLEKLNQSDIKKLHK >gi|325480023|gb|AEXN01000047.1| GENE 32 38262 - 38720 534 152 aa, chain - ## HITS:1 COG:XF2742 KEGG:ns NR:ns ## COG: XF2742 COG0286 # Protein_GI_number: 15839331 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Xylella fastidiosa 9a5c # 8 142 70 205 519 150 51.0 8e-37 MEDGEDYAEDRDEYLAKNIFFVPKEARWEYVASNATIPEIGQLIDQTMISIEEENPKLNG ILPKNYARPELDKRRPGEVVVLFDNLKLKDHGSSKDILGRAHEYAIAKFASLEGRNAGEF YTPTSIVRTIVEILEPFVCEFYPKNGAEHGEQ >gi|325480023|gb|AEXN01000047.1| GENE 33 38776 - 38883 239 35 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|297587128|ref|ZP_06945773.1| ## NR: gi|297587128|ref|ZP_06945773.1| site-specific DNA-methyltransferase (adenine-specific) [Finegoldia magna ATCC 53516] site-specific DNA-methyltransferase (adenine-specific) [Finegoldia magna ATCC 53516] # 1 35 1 35 500 65 91.0 1e-09 MDNVTGANLGFEKEIFVAADKLRGNMDAAEYKNVV >gi|325480023|gb|AEXN01000047.1| GENE 34 38970 - 39674 778 234 aa, chain - ## HITS:1 COG:no KEGG:Apre_0341 NR:ns ## KEGG: Apre_0341 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 234 1 234 234 439 96.0 1e-122 MNDYLECPFCKKIFPLTKDTFYEAYPGFDSNNWKNYVQKNSEDKIEYPRLDTSGLIIQFN KCPACKKVTIDIIGAGSQFPEGFRRRIFPASQAKQYPNYIPSHILKDYTEAYDILELSPK ASATLSRRCLQSMIRDRWKVNEKNLYKEIDAISDKVDAKTWDAIDALRKIGNIGAHMQKD TSLIIDIEPREAEKLILLIEVLIKSWYIEMHEREKLFEDIVSIKDSKEKLGFEK >gi|325480023|gb|AEXN01000047.1| GENE 35 39907 - 40686 902 259 aa, chain + ## HITS:1 COG:no KEGG:Apre_0340 NR:ns ## KEGG: Apre_0340 # Name: not_defined # Def: helix-turn-helix domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 259 1 259 259 464 97.0 1e-129 MNSIENNNNMSKLIKNRREELGLTIEQAAKKANVGTRTRSRYESGNPIRQDKIKGILVAL RWSKFPNDEETDVENYLDEYRTHDAWSETINDLYGKYAAIAFCIGSDILSDDIMMDIEEL SSLPKGSHIGQLNASNLQLSLPEEFLMDYDYNFLIKLKRALNQLIIKAVKGDDFIAHKPI EEIILKSIIDKAELLMQEMLINLNKDDFEDFQYWDEWIYDMFGDNDIEIFLYSDMSFPIA DDYKFDNWFEDRFYVNDDE >gi|325480023|gb|AEXN01000047.1| GENE 36 40745 - 40960 274 71 aa, chain + ## HITS:1 COG:no KEGG:Apre_0339 NR:ns ## KEGG: Apre_0339 # Name: not_defined # Def: putative cytoplasmic protein # Organism: A.prevotii # Pathway: not_defined # 1 71 1 71 105 110 91.0 3e-23 MSGELNKDENQIRSSAAEYLTYIDTTGNDEDALEIRYEDENIWLTQKIMATLYNVSVSTI NEHLKNIFEEK >gi|325480023|gb|AEXN01000047.1| GENE 37 41586 - 42440 992 284 aa, chain - ## HITS:1 COG:no KEGG:Apre_0600 NR:ns ## KEGG: Apre_0600 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 113 284 154 325 327 90 43.0 9e-17 MKKSKKILTIALSFALLTAVVQSYNTSKADSYNTPTIAQITSEVKTKDERIINAIKNLED AKARNIDAYNRALQRLENKPTASDKLVLDKSKALIEKANAQIIKLKNYQVKEQEKPEVNA EVKKEKIEVPFKTIRKHNIPGAETRIKRQGQNGYIEYERIYKDGKVIKETKASEKAPIDQ IIETKIVNKIPKQVTKTVEDKTKPIYKYEYKDRYFVRGTIDDAEGNEIPVFKLFYSYEEA DAYATKYEVLGNYGSYDTEEIKTLIGYETKEITETEYVETVVWE >gi|325480023|gb|AEXN01000047.1| GENE 38 42453 - 43019 778 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849599|ref|ZP_08170837.1| ## NR: gi|325849599|ref|ZP_08170837.1| hypothetical protein HMPREF9246_0106 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0106 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 188 1 188 188 168 100.0 2e-40 MKKKILTTSLALALGLTLVVPTATAKADELDDLLNGATEIGGELDQNTEDLDKLDKKKVV VPAAKIEDIAKPNKKEDKPSNSSSNKDDKKEDEKNKDNKDEKEKPSTPSSNKEDKKEDGK NKDNKDNKDDDKSKKDEKDDGKKKLENNNKKVENKVNTNVKTGVGSISAIVGLLSASIGG LFYTKKNK >gi|325480023|gb|AEXN01000047.1| GENE 39 43527 - 45062 2180 511 aa, chain - ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 197 511 2 316 316 398 61.0 1e-110 MEKKSEIMVLDFGGQYNQLIVRRIREMGVYATLHDCDVDLKSLDLENLDGIILTGGPQSI HSDESLKLNPEILNLNVPILGICYGMQALAFHFDGEISEAEKGEYGKTPLFVDQRSKLFE NVAQESIIWMNHRDQVTKISDGFKKIAWSLNCPIAGFENEEKNIYAVQFHPEVAHSEYGF QMLENFVLNICKAKKTWIMKDLAKETIEKIKEKYAGEKMICGLSGGVDSTIAATLVHKAI GNDLQCIFVDHGLLRKDEAKSVMDQYKEIGLNVKMVDASKEFLDLLKGVEDPEEKRKIIG NHFIEVFEREAKKFGDAKYLVQGTIYPDVIESGKGKGSVIKSHHNVGGLPEDMLFEGVVE PLRELFKDEVRALGESIGVPEEMVWRQPFPGPGLAIRVIGDITEEKLEIVRETDAILREE VKNAGLSRDIWQYFTVFTPLRTVGVKGDERSYDYVVVVRAVSSKDAMTVEAFDMPYELQQ TLSNRMINEVKGVGRIVYDITSKPPGTIEWE >gi|325480023|gb|AEXN01000047.1| GENE 40 45072 - 45587 563 171 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849558|ref|ZP_08170796.1| ## NR: gi|325849558|ref|ZP_08170796.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 171 1 171 171 298 100.0 1e-79 MENTKLILSRRLIIRRFEKEDLEKDLEFMKDPKFFYMSKVEDEKGLIDTCLFNYENKNNY NFWHIVNKGMNDSIGTIRANECENGVRIYIIINKSLRNRGYGREALEAVIDYFFTLGQEE EVYVKAGKNNESFKTLIDKLHFKKYDEDTKYNYYKMDNLDYMKYFAIFGEI >gi|325480023|gb|AEXN01000047.1| GENE 41 45632 - 46444 1002 270 aa, chain - ## HITS:1 COG:BH1373 KEGG:ns NR:ns ## COG: BH1373 COG1806 # Protein_GI_number: 15613936 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 8 267 10 270 270 203 41.0 3e-52 MARGVLNVYIISDSTGETAQTFAKSVVTHFPNVNFNINRKFNIDSENKIDKIVEKIPEKS IIIQTIAEKKLEEYVKEKALEKNIEVIDILGPALSLFEEVTGEKALREKKLTRKLSKDYF SMIEAIEFAVKYDDGKDKRGIKEADIVLLGVSRTSKTPVTMLLATKDFKVYNLPLVPEIR LPEEVFDIDPKRIIGLTINPDKLSKIREDRSKGLGIDSKSDYFDKERINRELEYAKEVFE DLDCKVIDVTLNTIEQTATDVLEYYKKNFS >gi|325480023|gb|AEXN01000047.1| GENE 42 46453 - 48087 1901 544 aa, chain - ## HITS:1 COG:BH1371 KEGG:ns NR:ns ## COG: BH1371 COG0751 # Protein_GI_number: 15613934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Bacillus halodurans # 1 543 147 691 693 340 37.0 4e-93 MRWGGRSIRFARPIRYFLSLLDDEILDFDAEGIKVSNTTKGHRVLGKSEIVVDKIDSYLD LLKENFVILSYKERREIILRGLNRYAKEIGGKFLKDEDLLEEVINIVEYPTVLMGELDHE YLKLPKEVIITPMKDHQRYFPIVDDNENLMPYFLLVRNGDDYAKENVISGNKKVLTARLE DAKFFYDIDNNKKLEEYVDQLDRLTFFEGLGSMKQKTERLISLSKNYLEEFKLGEDVSDN LLRAAYLSKADLVTKMVIEFTELQGTMGRIYATNSGENIQVANAIEEAYKPRSSEDSLPK SVAGIVLSIADKIDTITGHYIIEDYVTGSQDPFGLRRSAIGVINIIADKKIDVDIKDLVK DSLFVYTEKNELSFDYNQTLEKITEFFIDRLKNMMNDKGYRYDLVNAVLNTGESNVLSVI EKVKALEEFVGQDDSEEILNYFTRINNFTKDFDSIDVNVEKLDEGLEKQYYDCINNLESE KYLGQKLYQKALEEIASTRQIGNEYLDNTMIMVDDEEIKNNRLALLNKLAKDISRVFNIK DLVK >gi|325480023|gb|AEXN01000047.1| GENE 43 48147 - 48521 505 124 aa, chain - ## HITS:1 COG:lin1495 KEGG:ns NR:ns ## COG: lin1495 COG0751 # Protein_GI_number: 16800563 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Listeria innocua # 1 119 1 120 688 103 44.0 9e-23 MSKYLLEIGVEEFPSAYINSTKKQLEEKFKKLIEENKLSLEEIKVESTPRRFAILLDGLE ENKSEELISVKGPSKKIAYDNEGNPSKALLGFLRGQKADISDVIIKDFKGEEYVYVEKKK KALL >gi|325480023|gb|AEXN01000047.1| GENE 44 48521 - 49396 1023 291 aa, chain - ## HITS:1 COG:BS_glyQ KEGG:ns NR:ns ## COG: BS_glyQ COG0752 # Protein_GI_number: 16079581 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Bacillus subtilis # 1 288 1 288 295 395 62.0 1e-110 MYFEDLMLKLIEYWKGQGASFMLPYDSEKGAGTMNPHTFLKSLGKEPWKVVYVEPSRRPA DGRYGENPNRLYQHHQLQVLLKPTPENIQDLYLKSLEVIGINPKEHDIRFVEDNWQSPTL GAWGLGWEVWLDGMEITQFTYFQQVGGINCELESGEITMGLERVCMYLQNVDNVFDIQWS ENLKYSDVFKLPEYENSKYSFEDADSEVLGKLFEIYESEANRLIDKGLVYPAYDNVLKSS HTFNTLDAMGAISASERSHYIKRVRDISSKVAKAYIEKREELGYPLLRKDK >gi|325480023|gb|AEXN01000047.1| GENE 45 49409 - 50167 498 252 aa, chain - ## HITS:1 COG:lin1497 KEGG:ns NR:ns ## COG: lin1497 COG1381 # Protein_GI_number: 16800565 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Listeria innocua # 10 225 5 217 255 89 26.0 9e-18 MVTSDNSNIEGFVLREFTYKESSKIIEIFTKNMGKISVIAKGVLNKKNTNLSSTQRFVKA SYNLYKSGEKFFGIKDASLIKSYSKSNKNFDIIVYKSAICDLLLRTIDFDQKELVYNLLD KTFESFEKASENYLNIFLCFLLKYISFSGFKPNLKECSICGENIKPNYVYFSIEDGGVVC NSCRSRDHQLIYLTKEEYLFMLKLIYTPTDKVEKIDLKIEKKKLLNLITAYVLECLEIRK FSSLEWVIKLVK >gi|325480023|gb|AEXN01000047.1| GENE 46 50154 - 51035 918 293 aa, chain - ## HITS:1 COG:BH1367 KEGG:ns NR:ns ## COG: BH1367 COG1159 # Protein_GI_number: 15613930 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus halodurans # 2 293 9 300 304 263 44.0 4e-70 MKSGFVSVVGRANVGKSTLMEKILGEKISIISNKPQTTRDEIKIIYNDENSQIIFLDTPG IQTPRNKLQEHLLEVSEDSLKDSDIVTFIVDNSLTIGRLDKMILDLLEKIKVPKILLINK CDLLEEGEIDQIKKTYIGLNAFDYIIPISALNDENIEKYIQTIKEILPEGPLYYPSDMIT DKNERFIVSEIIREKALRNLSNEIPHGIFVRIDQFKKRDDKNLYDIYASIVVERPSHKEI VIGKNGRKIKKIGMDAREEIEVFMDSKINLKLWVKVEKDWRKKQKLVNRFGYK >gi|325480023|gb|AEXN01000047.1| GENE 47 51032 - 51436 594 134 aa, chain - ## HITS:1 COG:CAC1544 KEGG:ns NR:ns ## COG: CAC1544 COG0295 # Protein_GI_number: 15894822 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Clostridium acetobutylicum # 4 133 2 132 132 123 46.0 9e-29 MKKDLKELINEAIENKKNSYSPYSKFRVSSLVLTKKGNIYKGVNIENAAYSVTLCAERSA LSSAISAGDREIDTIIITGDSDMTYPCGVCRQFMAEFLDSDSKIVIANSTEDYKIYGLRD ILPYNFSKKDLEEK >gi|325480023|gb|AEXN01000047.1| GENE 48 51433 - 52251 931 272 aa, chain - ## HITS:1 COG:CAC1294_1 KEGG:ns NR:ns ## COG: CAC1294_1 COG0818 # Protein_GI_number: 15894576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Clostridium acetobutylicum # 41 194 4 156 157 85 31.0 9e-17 MKDEKQLIEEIKSQVKEELKEEKRKEDEAQKYIPKTRSAGEKFVKGFDYAFEGLVFAINN EKNMKFHVLTSILVLFISLFLNVSRVEMMFLVFSIAFVISCELLNTSLEQAVNLAGEGKK SKEAKASKDLSAAATFVSALNTIFVAYLVFFDKVANFSSSVVLRISRRPSHLALIAVSIV IISTIFFKGIFYKGHGTAFHGGFVSGHTSISFCLATIGAMRVDEGLLIFIFYGLAIIVAE SRFEANIHSLPEIIRGAILGTAIALLIFGVFS >gi|325480023|gb|AEXN01000047.1| GENE 49 52248 - 52712 504 154 aa, chain - ## HITS:1 COG:SA1399 KEGG:ns NR:ns ## COG: SA1399 COG0319 # Protein_GI_number: 15927150 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Staphylococcus aureus N315 # 17 152 19 152 155 99 41.0 3e-21 MKLIIDNTTNEDLTLQKDLEKVIKEVLKVENVDEKKCEISLSFVDEIKIRDLNKDFRGID RVTDVLSFPIEDFFNEDRKTLLEKPYLMLGDVVICTDVARKQAKELGHSFEREIMYLTCH SILHLLGYDHMEDDDKKIMRSKEKQVMKNLGVFK >gi|325480023|gb|AEXN01000047.1| GENE 50 52693 - 53634 1073 313 aa, chain - ## HITS:1 COG:lin1504 KEGG:ns NR:ns ## COG: lin1504 COG1702 # Protein_GI_number: 16800572 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Listeria innocua # 3 298 20 315 319 323 56.0 4e-88 MGLFGNFDKNRKYIENRFDVKIKTENGNISIKGEEVNVNLAIRLIEEVIEVIEKEKSIDF QKLKYFSDMLVSENKEVIKSSLDQVIVTTANGKPIKPKTLGQKSYVSMINNNDVVFGIGP AGTGKTYLAVAMAIRAFKNNEVNRIILTRPAVEAGESLGFLPGDLQDKVDPYLRPLYDAL FEIFGFETYQSLVEKGVIEVAPLAYMRGRTLDNSFVILDEAQNTTFEQMKMFLTRLGYGS KAIITGDITQIDLPRGKNSGLKSASRILRNVRGIEFMEFTAVDVVRHPLVQRIIEAYDKA DKEKENKDEINNR >gi|325480023|gb|AEXN01000047.1| GENE 51 53735 - 54160 259 141 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849582|ref|ZP_08170820.1| ## NR: gi|325849582|ref|ZP_08170820.1| conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] conserved domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 141 1 141 141 141 100.0 2e-32 MAKDNLKTKFCKFIYKLDKENNKEEGKYTPDFDTWLKELNNQNKRKNTTKKKMSFGEAMS SLAKDEKKNKKTFDKTYKKVQRKNNKDSYNKKIKQFKKSSDIYSKQIEDYKKEREKIKLD KNELKKAIIYSEIIGKPKAKR >gi|325480023|gb|AEXN01000047.1| GENE 52 54160 - 55101 1381 313 aa, chain - ## HITS:1 COG:SA1402 KEGG:ns NR:ns ## COG: SA1402 COG4864 # Protein_GI_number: 15927153 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 17 312 21 324 329 366 68.0 1e-101 MPIIIPALIVILVVVFLSLVPIGLWITARSSGVPVSMGSLVAMRFRRVNPRHIVYALIKS HQAGIQIESSDLESHFLSGGDVNQVVDALIAAERANIDLTFQQAAAMNLAGRNVFEAVQV SVNPKVINTPTIAAVAKNGIEVKVIAKVTVRANIERLVGGAGEETIIARVGEGIVTTVGS SHTHAEVLENPDNISQTVLEKGLDSGTAFEILSIDIADVDVGRNVGAELQRDQAEADKNI AQAKAEERRAQAIALEQENRAKVVEAQSKVPLAIAKALESGNLGVLDYYNMKNINADTQM RNKISETDSRDEY >gi|325480023|gb|AEXN01000047.1| GENE 53 55101 - 55724 603 207 aa, chain - ## HITS:1 COG:BH1356 KEGG:ns NR:ns ## COG: BH1356 COG1030 # Protein_GI_number: 15613919 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane-bound serine protease (ClpP class) # Organism: Bacillus halodurans # 29 205 269 442 445 70 29.0 2e-12 MLADILLALSFSLAFISIVAIFFTDKKILFSIIALVLFAYFYKVGFDRGQADLITIICFI SGILLLVIELITPSFGILGTLGLVLTIYSLMDSLDNSLFGIIVLMVTAASVFISITIFIR LGFSAKVFEKSILTNVQTKERGYNSKKDYSFLLKKSGRTLSILRPTGRVEIDEKIYDART YGEFIKKDVGIKVVEIKDGNIYVKEDI >gi|325480023|gb|AEXN01000047.1| GENE 54 55810 - 58356 2555 848 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849574|ref|ZP_08170812.1| ## NR: gi|325849574|ref|ZP_08170812.1| hypothetical protein HMPREF9246_0122 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0122 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 848 1 848 848 1460 100.0 0 MKSYRKIAIGFGIGLIAILVFYFGKGFLSSDKNKLKNSNNPDVILSDSKEKNNNSNSKAK AKYIEKRVSMKENYPQKSQKLEFSDKKNFFTIPGKENIKEDDFGEYVDGEILVDVDLDKF DEKIFDKYGAKVIGKCDIWGGYQINIPNKSVDELEKIAEKIKKEEGVVVSRVHWLIPVGI NESYPDDNFKIGKKNFDKNNLWDGYDLDKGFDRKNKISEDDPYWSYKITNLSYMWKNLDF KEESHVGVFENGKIGTSKNKDTFIEKDLDFQNLNTQVIEDENKRSKSEKFYKEATKDMKI HTYLVSSILAARHNNLGFSGVGKDTKVYPTVFDFSIFPYLLAYRIDNSSNQIKIFNLSWG YLKEVLYYLNTDKENIKKDSKSKNRTLRRIAKFGLRSEGRNQKQYYRRFQLYLRDNSMVY NVALKKLKEQGKDFLIVNSAGNEGEIIRDIEEYSDVEIKKTTFFEEVDDDIKKRIIIIGA SKPEINKNGKTIFWKDSTTRNLDIVAPGNNVPGYDENGKLMLWDGTSASAPFVAGLAANL YSAYPDKMNGELAKELIVKSGNIDVIDEFNGENSKLVDAKKLTELVKKKFEEKKEDKKDQ KKINRKIIRENKKDDNKGNLEQIENVPSNQSSNKDQENPPSASNDENLSKDKTYKVIQDG KDQGKISILDMGDAYFIDVDKLDEIYFSDSPYLTDPEYSDIANKYKKILAENQGRHIKEN SDGTYYFGLFPGNIGVSENIPNYAYQYFPDYGVFAFSRYDYMKEDKVCFLPSKYAGVILD GKLYVDSNWLAWSFGFELDYTIDSKNKIFEYKREGHDIGQEGVDYINISTENYGDIYELL DDNFEKIN >gi|325480023|gb|AEXN01000047.1| GENE 55 58654 - 59670 1296 338 aa, chain - ## HITS:1 COG:lin1420 KEGG:ns NR:ns ## COG: lin1420 COG1304 # Protein_GI_number: 16800488 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Listeria innocua # 2 335 6 342 358 214 35.0 2e-55 MDEKRRARKDEHIENYLRSEFRSKTLLNNIYVEHNALSKVNFDEIDTSIEFMGKKISMPV MVNAMTGGTEISEDINEDLSNICADLNIPMAVGSESIALKDIKARESFSLLKDKNNVFKI GNLGFENSLENFEFAKDLIGASAMQAHLNIAQELVMDEGERDFSNNFENLKNIRKNLSAP LIVKEVGFGMSKEVGKKLLDIGVEYIDVAGKGGTNFIEIEDMRIFDKDYSEFYSWGIPTA KSILDLRSLSDDFFLISSGGIRNATDVCKSIIIGADMCAISGEVLSFLLRGDYDYAQKYL EELQTKIKIFMALVGAKNIEELKKVPYKITGRLKELID >gi|325480023|gb|AEXN01000047.1| GENE 56 59679 - 60653 1211 324 aa, chain - ## HITS:1 COG:BH3647 KEGG:ns NR:ns ## COG: BH3647 COG1316 # Protein_GI_number: 15616209 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 17 243 91 321 359 116 30.0 5e-26 MVGVDVNENNENPDFTRTDTIMLCKINAETGKVDLLSIPRDSRIKVRDEFTKANHAHAYG GIGLTLKSLRDFLGLDIDYYVEINYDALVDIVDGMGGLKYKVPKGISIDHGDVHIRPGIN DMDGMDVLWYLRTRKIYDNGDLGRVNAQQEFLKAIVNELVKKSKEISMTSLIETYFKDVK TNLPFSTMVEFANSMSNFSSDKFKTYTVPGEASMIDGISYYIPDYEATWDIVNKVFPKYK LKGWKREDSYYWEYEYYNYSYKNYGSNEDYNKIKENKDNNLNNYKDFDDNKDEVKEKTDD YEDNSLDNKNYLNDEIEDFTEDNY >gi|325480023|gb|AEXN01000047.1| GENE 57 60908 - 61732 940 274 aa, chain + ## HITS:1 COG:lin0298 KEGG:ns NR:ns ## COG: lin0298 COG0561 # Protein_GI_number: 16799375 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 267 1 267 270 175 36.0 1e-43 MIKLITIDIDGTLLTDLRRLPEKNKKMILKAKKLGCHIALVSGRPFSGILPYVKELDLEH EGHFSIAQNGSYIFDNYTKEVITGVFQKPKDLIALDDSLKKFKVQVSAMDDDSFYTRHKN PNLFTKVDSFLTKLKLKKISYHDFDQNKNFGRFLIMGWPWNIEKVMDNMPSYVNENYYYA KTAPVLIEVMNKNANKGNAIKLMSEKLGFKIDEIMAIGNEMNDIPMLDMAGFSVAMENAN DYLKPHADYITLSNNKAGVGEAIEKLIENNFEKF >gi|325480023|gb|AEXN01000047.1| GENE 58 61984 - 62190 136 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849600|ref|ZP_08170838.1| ## NR: gi|325849600|ref|ZP_08170838.1| hypothetical protein HMPREF9246_0127 [Anaerococcus hydrogenalis ACS-025-V-Sch4] hypothetical protein HMPREF9246_0127 [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 56 1 56 68 82 100.0 9e-15 MSNNNIFKDSNLLEFVTSTITFVLLIILTIIQFVNSKPFWWIILLVTIIMGANAYLKYKK FKENKKHS >gi|325480023|gb|AEXN01000047.1| GENE 59 62180 - 62614 679 144 aa, chain - ## HITS:1 COG:CAC3292 KEGG:ns NR:ns ## COG: CAC3292 COG0822 # Protein_GI_number: 15896537 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 141 1 141 143 153 55.0 8e-38 MDLNDVYTQVILENSRNQKNKRNLENPDIKEPGHNPSCGDEIVLELKHDGNVITEAAFTG HGCAISQAATSVMCDEIVGKTIEEAKEMAKIYIGMIKREDISDEDLEKIGDAAAFQNISN MPQRVKCALLSWKTLDDVIEKDVK >gi|325480023|gb|AEXN01000047.1| GENE 60 62614 - 63834 1651 406 aa, chain - ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 5 405 4 405 408 469 57.0 1e-132 MDIEKIRKEFPFLDEEKTGKKVIYLDSAATSQSPLSVINAQADYYKYSNANPHRGAHFLS WKATEAFENTRKKVKEFINASKDEEIIYTRNATESLNLVAYSYACENLKKGDEIVISILE HHANLVPWQRVAKETGAVLKYVYLNDDYSLNYDEVKEKITDKTKIVSITASSNVTGEMTD QKLITELAHQVGAISIVDACQLAPHGKIDVKDLDCDFLAFSAHKMYGPMGIGILYGKYDL LEKLKPYNLGGDMIEYVYEQESTFAAPAQKFEAGTQDVGGVVGLSAAIDFMNEIGVENIY KHENELARYAYELIKDIDHIKVFFPEKRKTGSVVSFTFDDIHPHDVATILDMKGIAVRSG HHCAMPLHTYLDVSSTCRASFAIYNTKEEVEYFAKELKNVRKAMGL >gi|325480023|gb|AEXN01000047.1| GENE 61 63836 - 64882 1154 348 aa, chain - ## HITS:1 COG:CAC3290 KEGG:ns NR:ns ## COG: CAC3290 COG0719 # Protein_GI_number: 15896535 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 85 337 103 355 366 151 35.0 2e-36 MEKVNVMREPTWSYTKLNYSEKAPSLNEKIGYKNLESSNKENKSLDEIFREKNYGLSQAF LDENKKFNNLDIYRDIDGEKDLEFINLNLDQKSKQLVNKIDINAKKGSKSSFLVNFSQSD GDSSYLNSLIRLNLEEDSSVKLVVVVDLLENSLNLQQISSIIGDRANFDISYIELGADKS YVNIRNFLDGEESNLEENGIYFKENDDFLDIGAFNDHKAKVTKSNCLFNGALKGKAEKRW KGVVDLKRGCEHADGKIGDYAVMLSPDAINRSAPVLLNEEKDVSGEHAASVGRFDNAMLF YIMSRGFSKRKAESLMLEANFAPTIDKIDHEELREKVRYKVHAMNTRG >gi|325480023|gb|AEXN01000047.1| GENE 62 64882 - 66297 1908 471 aa, chain - ## HITS:1 COG:CAC3289 KEGG:ns NR:ns ## COG: CAC3289 COG0719 # Protein_GI_number: 15896534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 11 468 8 465 466 612 61.0 1e-175 MTEKKFDESTFKDIDRGIYDVIDKFEYSDISDKGLNKEIVEELSRKKNEPEWMLKRRLQS LLIFEQTENPSWGPDLSELNMADITTYVKPKTDKKSNWDALPEEIKDTFDRLGIPQAEQE SLAGVGAQYDSEEVYHSIQKHLSDQGVIFTDFDTALKEHEEIVHKYFQRAIPPTLHKYAA LHGAVWSGGSLIYVPKGVNVDIPLQSYYRLNAPGAGQFEHTMIIAEEGAKVHFIEGCSAP KYNVVNLHAGSVEIFVHKDAEVRFSTIENWSRNMYNLNTKRAIVEENGQVEWISGSFGSK VSMLYPTTILNGEGARAEYTGITYASNGQYIDNGCSMIHNAPNTYSTALTKSITQGNGKS MTRSFVKIGKKAKGSKSTVDCENLMLSRESKSDTIPTLDIRNDDVDCGHEAKIGSLDQKQ IFYLMSRGIPENEAKSMIVRGFAEPVAKELPLEYAVEMNNLIDMELEGANG >gi|325480023|gb|AEXN01000047.1| GENE 63 66299 - 67030 225 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 233 1 228 245 91 27 2e-17 MKELLKVENLHVSVGDTEILKGIDLKVNAGEVHVIMGSNGSGKSTFMNSIMANPIYDVTE GKIFFEGEDITDLTTDQRARAGIFMSFQSPDAINGVKLRDFLKQAKEEVTGKKPSILGFN KELKKEMDDLKLSEEYANRYVNVGFSGGERKKSEILQLKMLNPKLAMLDETDSGLDVDAV RIVSEGIKNYLSEDNAVIVVTHHNELLENIDVDYVHVLKDGVIKETSDASLMEKIEKEGY EWV >gi|325480023|gb|AEXN01000047.1| GENE 64 67264 - 67530 375 88 aa, chain - ## HITS:1 COG:BS_crh KEGG:ns NR:ns ## COG: BS_crh COG1925 # Protein_GI_number: 16080527 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus subtilis # 1 85 1 85 85 70 43.0 7e-13 MYEEKVTLVNEIGLHARPASIFIREAVKHGCDINVEKDGRVYNAKSIMSVLSMSAGKGEE ITIKAQGEGEQEAVKSLVDLIENELTNY >gi|325480023|gb|AEXN01000047.1| GENE 65 67781 - 69199 1897 472 aa, chain - ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 5 472 7 486 486 306 41.0 5e-83 MQYEDLQPKEVFHWFREISNIPRESGNEKGISDFLVNFAKERNLEYWQDDVLNVYIKKEA KKGCEDYPEILLQGHMDMVAVKEKDSDHDFSKDPIELLVEGDWVTANKTTLGADDGIAVA YALAILDNDEINHGPIAALITTGEETSMVGVNNLDTKKLGNPKYLLNIDSEEEGILTIGC AGGMDIKFSFEKEYEKANGEFISIEFKNFQGGHSGMEIDKFRLNAIKGLVRVIDTLDSYK IAKIEGGVKRNAIPSHSYAIVEVENAKEAIKKLEEVKENILHEYKNSDPNGQIIIEECSY DGEVFTKELSEKIVNSNLIVADGPVKKFDGSMVTSSNLGLIEEDDKEIIFTVLARSELTS AKRFRRDVIKRQVELFGAKVSSDNEYPGWEREDSELLEKMVKVWENLYGKKPEILTTHGG LECGLLKQDMKETQMVSFGPEIEGAHSPEERVNIKSTENNYKFLIELLKELR >gi|325480023|gb|AEXN01000047.1| GENE 66 69371 - 70417 1173 348 aa, chain + ## HITS:1 COG:SA1887 KEGG:ns NR:ns ## COG: SA1887 COG1181 # Protein_GI_number: 15927658 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Staphylococcus aureus N315 # 3 348 5 354 356 201 32.0 2e-51 MINTYLLCGGPSSEHDIALRSALNISKNLNKEKYKLKLVYVDKKGRFSKAFDFIDTDDEF DLVKTCKENILESISDFLLELKDKDKDNTIIIPCIHGTYGEDGTIQGFLDAIDMAYIGNG LLSSSVCMDKVTANDIFEKNKLSQARYLYAKEETFNEDFAKKCQEYIKFPMIVKPSANGS SVGVNKAENIKELLKFGKEALKYDEKILVEEAIIGQEVEIAIIGENELMASKPGAYTTDH TFLDYDAKYFDKSTKEELPYPIDENLEKELLEFAKKCYKACGCQGFARVDIFLKDNKFYI NEINTFPGFTPTSFFARLCKISFNLEFEEILDMLIEEGFKSFQKRRFK >gi|325480023|gb|AEXN01000047.1| GENE 67 70414 - 71793 1612 459 aa, chain + ## HITS:1 COG:BS_murF KEGG:ns NR:ns ## COG: BS_murF COG0770 # Protein_GI_number: 16077524 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Bacillus subtilis # 1 452 1 449 457 342 40.0 9e-94 MIERSLDQISKMLGGEISDPEYGHVKIKGVSIDSRTIKKDMLYIPIVGEKFDGRIFIEEC QNAGSPAFLIDKNFKIPKSINIPYIIVDDTQKALRDLARAYRKELDIKIIAITGSNGKTT SKNIIHSVLSEKYKVEKTHGNLNNEIGVPLTILDFSEDTDIGVVEMGTDDFGEISVLTNI ARPDMAMITNIGDAHLLKLKTREGIAKAKLEILEGLKDDGIFLYNGDDEILKKVLPSYEI KQKTISFGMGDKVDFKVEAKEYTSTSTNFSYKDENYSVPLLGSHQVYNGALAVLIGKLFD LSYDQIKVGLSKSSNNANRNELIERDGFDILDDAYKSNPQSLKQGLELAGFLDGYLNKIV VLGDMLELGDDELNLHYKSGLDIDPKKINYCLFFGPLCKEMYRASLENFPQDRSFYFENK NDLIDKLKLLITKSTLVFVKGSRGLHMEEVIEAIYDFRV >gi|325480023|gb|AEXN01000047.1| GENE 68 71838 - 72770 1225 310 aa, chain + ## HITS:1 COG:lin2430 KEGG:ns NR:ns ## COG: lin2430 COG1105 # Protein_GI_number: 16801492 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Listeria innocua # 1 310 1 304 307 229 41.0 7e-60 MIYTVTLNPSVDVFLEVKNLNIGNKNHVTDEFTLPGGKALNVSRVLSQLQIPTVATGFIG GHQGDFIKEWLDKENIMTDFVEIEEANRTNIKLLINNEETTINSKGPNISHYEVDELLYY LSRVGEGDTIVMGGSIPPMEEKADEDIYSRMVSIAKANKANFIADIPAKYLPDVIKEGPI LVKPNVDDLMEIFGEKIETIEDMDKYGKKIIEMGAQNAIVSYGKKGSMFFSKDGHSYISE EIHINEVVNSVACRDAMISGFIGTLARTSDTLEAYKVAVAAATATAEVLDLPTREEIEKI IPKVVINQFS >gi|325480023|gb|AEXN01000047.1| GENE 69 72850 - 74094 1609 414 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 4 401 4 400 400 262 41.0 9e-70 MNKKTISIMLAYVGVLTGAGLASGQELMQYFVSFGVSGLFGLGFIGIFHILVGGIILQLG SHYLAESHIDVIDEISNKYIGKFMDWALVINCFLMGFVMIAGAGSNLNQQFGFKPWVGSL ICTLLIIFIGMLDFDKVTQVIGAFTPLIILFAVVGSIYTFITISPDWQSLDKIGKSVLSP LPNPILSTLNYFGLCMISGISMAFVLGGSKTDSAEAGLGGMLGGLMVAILTALVGFTLFF TLPMVKDSDIPMQVVLQNIHPILGLLMSLIIFGMIFNSSISLFYSAARRFSNTENKFRRN LVIFTLIGFGLSFMGFKKLMSILYPILGYLGLALTIILVIAWFREKEEIKREMRRRFAIS VLTRRKLDEFEDFGKMEKDKLNRLAEKSIIDNKEIKQAVHEEIKEELEEENSEE >gi|325480023|gb|AEXN01000047.1| GENE 70 74558 - 75844 1455 428 aa, chain - ## HITS:1 COG:TP0917 KEGG:ns NR:ns ## COG: TP0917 COG2239 # Protein_GI_number: 15639902 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Treponema pallidum # 4 426 23 445 449 382 46.0 1e-105 MKDSLRRTNPVDIEEFMSELDNEQSLIVYRLLRKDDAAEVFAELKHDGKHRLLTSITDPE LDAIVTALNFDDVIDTLEEMPATVVKRILRNSDSEMRKRVNQFLQFPEDSAGSLMTTEFI EVNPQMTCQKVLERIKRVGTSSATIYTCYVTDKTKSLLGYVSLRMIVTSPSDTKVKDLMY EDVISVEAYEDQEEVAKTFRRYGFTALPVVDSERRLIGIITVDDIMDVMELETTEDFQRM AGTTPDEEEYSTTSALKLAKNRLPWLMFLMISASFTSTILKSSQKVIESIIALNMFIPML TDSGGNAGSQSSTLVIRGMATGDVDLKNWFKVVGKEFEVGVIVGVVMSLLAFLKCLLFDG VDMEVAAIVAITIFVIIIIAKVVGALLPMGAKKLGFDPAIMASPLITTIVDSIGLICYFE VAKIIMGI >gi|325480023|gb|AEXN01000047.1| GENE 71 75920 - 77122 1484 400 aa, chain - ## HITS:1 COG:CC3435 KEGG:ns NR:ns ## COG: CC3435 COG0793 # Protein_GI_number: 16127665 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Caulobacter vibrioides # 17 380 7 374 464 229 37.0 6e-60 MKKIGKVLLAFLLVIGIGFTGFTLGKNSSKDSPLLSQENQKHMAQMEAMKELIDENFLFD YDEKQLYDGSLKGMFENLKDPYTAYYTKDEFEKLMEGVNGKYAGIGVAVQASDEGYIKAI SVFDESPAKKAGIKVGDYITKVDGESYSADQLEEAVSKIRGNVGEKVKITVLRKNDKEKA EEKEIEVERANVKVDTVDSKVVEKDDKKIGYLRVKEFEDVTKEEFAKELKSLKDQNVDGI VMDLRNNPGGSLDVCLAIADTFLDEGVIVSTVDKKGKEIVEKSDKDMDKTPMTVLINENS ASASEILAGAFKDRGRAKIVGKTSFGKGIVQKLFPLEDGSGVKITISEYFTPNKTKIHKI GVKPDIEVENKDNDSLDIENLDKDDQFNKAMDTLLEEIKG >gi|325480023|gb|AEXN01000047.1| GENE 72 77274 - 77858 835 194 aa, chain - ## HITS:1 COG:CAC1629 KEGG:ns NR:ns ## COG: CAC1629 COG0693 # Protein_GI_number: 15894907 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 3 191 2 187 188 159 45.0 2e-39 MDKVLVFLADGFEEIEGLTIVDYLRRVDISLDTVSIKDDLYVKAAHDVIIKADKSIDDIN LDDYTALYIPGGTKGAERLRDDQRVIDIVKKFDQDKKIIAAICAGPIVLERAGIVSDKAV VSHPSVEDNLKNIGKYEKDELVVQDSNILTSRGAGASIYLALKLIEKISGKDIKEKLKPG IQQDFIENYFSFKY >gi|325480023|gb|AEXN01000047.1| GENE 73 77891 - 79075 906 394 aa, chain - ## HITS:1 COG:SP0604 KEGG:ns NR:ns ## COG: SP0604 COG0642 # Protein_GI_number: 15900512 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 8 389 52 434 442 235 34.0 1e-61 MSKISDKVSTNLQGKEIDFVKDDLEIISKSFPIDASFMKLDKLRDVKIEDDPGINFNSYN NSLLIEERDVKLNNNENIRIKFVSTIDLKQEGKEMSLSFLPLTLFLSLISSALISFFHAK KICKDINQIKDALKRMMSLDKDACLEMDGKDEVEELKYYVNLMYESLLNSIDSLAEKNKE IIRLEKLKYDFFKGVGHELKTPLASLKIILENMKYKVGKYKDRDTYIDKSLELTDQLSEN ISFLLAISTIKDFKNDEEDLFIGHILEEIIEKYKIMANEKKIKIENYIKDEKIYIGKNAL KMVLSNLISNAIKYSKINSQIEIGARNSYFYIRNTMEKDFDIEKIKNINFDINKENSKGL GLYIVRNILKNYEIPYKIKKNEEELIFYIKIFDK >gi|325480023|gb|AEXN01000047.1| GENE 74 79204 - 79860 662 218 aa, chain - ## HITS:1 COG:SP0603 KEGG:ns NR:ns ## COG: SP0603 COG0745 # Protein_GI_number: 15900511 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 218 1 218 218 271 62.0 8e-73 MKILVVEDDQIIREGVCEFLSELSYDVDGACDGREALDKFSNNSYNLLILDIQIPFINGL KVLEEIRKTSRIPVLILTAFNDEEYKISAFTNLCDGYMEKPFSLSLLKLRVESLLKRYYG DREIFEYKDAKINFSSYKATYGGENIDMNAKELEILKFLLENEGLALSRMQIIENVWKES DEIPYDRVIDVYIKQLRKKLGLDCIKTIRNVGYKLELK >gi|325480023|gb|AEXN01000047.1| GENE 75 80065 - 80667 680 200 aa, chain - ## HITS:1 COG:no KEGG:Apre_1411 NR:ns ## KEGG: Apre_1411 # Name: not_defined # Def: sugar-binding domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 22 198 1955 2122 2126 85 41.0 1e-15 MTDEEKGQVKDKIIKINKNKFPENTKVEIGKDGSAKITYPDGSVDEILGKDLVEEKKNQS KPDSINQTDAEKFPPVIPEKSLVKDKNNLTNKEKEEVSDKIKKANPQVEKIEIDRDGSAR LYYKDGSINKIKGSDLVIEKENISKEGENKNKDRKSIKTNQQANNKNTNVKTGVESQMTV IASLIGSFMGLFASKKKKKK >gi|325480023|gb|AEXN01000047.1| GENE 76 80860 - 85353 5342 1497 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_0915 NR:ns ## KEGG: HMPREF9243_0915 # Name: not_defined # Def: putative C protein alpha-antigen # Organism: A.urinae # Pathway: not_defined # 73 947 103 981 2252 658 49.0 0 MKNSKKFNEIISRKKSLESKKTPKYGTRKLSIGLVSCMLGFSLIIAPSSSKADEVISKDV ESVEKVDDPSLDEKKVENPEVKEDLNDNSSNDLAEDDISNKNLEDKKEDTSNLNLDKADE KTLENEKDKNEKEKEVKKEFSLNDAQITRLKDAGFSQAEIDLVVENIRAKISEDSNFDVD AHLDSVIKTKNEAKKSIADEDKKVNDQNRSIQERSADIEEIQKGAVYSPGQEGDKQSYSG TAYIYRRNKLNDVGKETLSGVNVYLQWVDYDGYVSKVYKTTTRPDGTFTFNFQKPEVDKY GNVHHFQLAANPNFAIRTWVENPDPEKYSVVKPGDQKYGFHKRLDRTNESWDFTAGINRI VGGQVALQEKSMQNDWLVKPKDEWSKAPSSDGIWENQGIYGNVRGQVWFENGDPKGSDAR GWKKDSWDVNATGNEIVGSYVNDEVARLFDKWKEDHKDYKMEDFRKAQEEIIRDYEAKNG KGSHIAETVYTKVDKDGNYYLPFRGLYGISPYKQNSGAKISHTISDEEYGKLVKDEDITH SNLMAWNGTIGQKHRHINWQYMYVSPLIKRYNMWGNTSANNMFNDLSGTLLPIGPESLAG GNIRNVNFALLAAQPMHDIKDYDTQDNYAKPGDIAENESSGLLPNHEYQIQWFKDGKKYG DPIKVTSNEKGLVGSNPLTVPKDLTGPHTFTSAVFYANADTSDLGTALAADSFIASPDAS YDMVENKIGEEAKTDSPKFVDKNGNKYSPDFSKEKPTFEYVERVESTDENGEKKVEYKPL TTVKVGDKEIKVSVDPKTGVVKVAPEETAKLKDGDQIKVPVSIKFNNGLRMNADALIKIV DPNSMAANNEVSYEDSKGKVGEESKINPKFTDKDSKEIQVPKNSKFKLGDKAPEGAKIDE KTGQVTYTPNENDSEKTVKIPVIVEYEDGSKDNTEANIKVGKQEKSKAPEINKVSEGDRK ISGKGVAGSKILLTKASDNEGDIISEDIVVDENGNWEIDLPDDIILNKGDQINANQIEKG KKISDPTARDVDPKVEDKNNFEPKTKDITKDFGNPTSEEEIKNSVEIPNYPKDKKNPTIT IDDPKQIPDGKEAGDYEVDITVKYPDGSEDKAKVKVKVKEKTPENLPDIIDVTENPDAKT PEGYVRVSFEAGEGTEIAKTKIYDVKEGKSLKEEDYPQVKAKDGYENPTWSVKPGEKITK ENAKIVASAKKKLTDAEKYEPIPKDLTTKVGQTPDADKAIENKNDLPENSKYEWVKKPDV DKAGESLGKVKVTYPDGTSDEVDVKVTVVDEIKDKDKYPAQNPTKTKVNDKDNLTEKEKK EVEAKVREKNPNAKDIEVGANGDTSITYPDGSRNEIGGKETVEEKTRIDDRYKNPVDPKD EKQSTGVRVVNPNKDGSTKISAKDEDGKNIPVEIDKESGEIFVKPGQDVDGPITVTVEDE DFDGGKKDIEISVNGHKKDRDDNKKIEKTDAEKSPAQDPEKTRVKDKTNLSQEEKIR >gi|325480023|gb|AEXN01000047.1| GENE 77 85998 - 86954 1265 318 aa, chain - ## HITS:1 COG:no KEGG:FI9785_83 NR:ns ## KEGG: FI9785_83 # Name: not_defined # Def: putative secreted protein # Organism: L.johnsonii_FI9785 # Pathway: not_defined # 6 255 1083 1325 1423 156 45.0 1e-36 EKDNTGDKTIADKLDPNAPEKTGVKDSKNLTDKEKEEVKKKIEDANKDKFPEGTDVSIDD KGNATITYPDGSKDTIPAKDLVFQYKHGDPAVEEKPEMPISDIIDPTVPGKTEVDNKDHL TDKEKEDIKNKIEESNKDKFPEGTKVDVDNKGNATITYPDGSKDIIPAEKLVSEKSKAST PAENTDAENNPAVIPGKTEVEDKNNLTDKEKSEIADKVKKVNPKASKIEVANDGSVTITY PDGSTNKIAGKDLVIEKAKGQGTRKAQAKANADNDLHKVKYVNQSTNVKTGIESQAGIIA TLLASVGGLFTSKKRKNK Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:24:25 2011 Seq name: gi|325479995|gb|AEXN01000048.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00038, whole genome shotgun sequence Length of sequence - 22774 bp Number of predicted genes - 28, with homology - 28 Number of transcription units - 10, operones - 5 average op.length - 4.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 191 318 ## FMG_0965 hypothetical protein - Prom 323 - 382 10.2 - Term 330 - 364 -0.4 2 2 Op 1 . - CDS 387 - 1856 1391 ## FMG_0966 hypothetical protein 3 2 Op 2 . - CDS 1874 - 2410 593 ## COG4283 Uncharacterized conserved protein 4 2 Op 3 . - CDS 2472 - 3842 1268 ## COG3505 Type IV secretory pathway, VirD4 components 5 2 Op 4 . - CDS 3863 - 4261 208 ## FMG_0982 putative plasmid transfer factor 6 2 Op 5 . - CDS 4254 - 4988 801 ## COG3645 Uncharacterized phage-encoded protein 7 2 Op 6 . - CDS 4985 - 5470 685 ## FMG_0984 hypothetical protein 8 2 Op 7 . - CDS 5463 - 6290 686 ## COG1484 DNA replication protein 9 2 Op 8 . - CDS 6287 - 7060 757 ## FMG_0986 putative replication initiator - Prom 7082 - 7141 4.6 - Term 7076 - 7117 4.0 10 3 Tu 1 . - CDS 7144 - 7425 211 ## FMG_0930 putative lipoprotein - Term 7430 - 7473 5.6 11 4 Op 1 2/0.000 - CDS 7489 - 9402 2616 ## COG1190 Lysyl-tRNA synthetase (class II) 12 4 Op 2 1/0.000 - CDS 9411 - 9884 631 ## COG0782 Transcription elongation factor 13 4 Op 3 . - CDS 9889 - 10554 315 ## PROTEIN SUPPORTED gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase 14 4 Op 4 1/0.000 - CDS 10526 - 10855 299 ## COG0042 tRNA-dihydrouridine synthase 15 4 Op 5 . - CDS 10833 - 11624 1041 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 16 4 Op 6 . - CDS 11697 - 12191 574 ## Apre_0624 hypothetical protein - Prom 12214 - 12273 6.2 - Term 12214 - 12254 4.2 17 5 Op 1 10/0.000 - CDS 12283 - 12834 658 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 18 5 Op 2 . - CDS 12831 - 14222 1215 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 19 5 Op 3 . - CDS 14194 - 14511 370 ## Apre_0621 septum formation initiator 20 5 Op 4 . - CDS 14504 - 14749 437 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) - Prom 14788 - 14847 8.6 + Prom 14562 - 14621 7.8 21 6 Tu 1 . + CDS 14850 - 15893 1074 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Term 15885 - 15928 7.2 22 7 Op 1 1/0.000 - CDS 15938 - 16987 1648 ## COG0468 RecA/RadA recombinase 23 7 Op 2 . - CDS 17012 - 17542 336 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 24 7 Op 3 . - CDS 17544 - 18929 1484 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 19102 - 19161 4.3 25 8 Tu 1 . - CDS 19163 - 19801 352 ## Apre_0616 cell divisionFtsK/SpoIIIE - Prom 19879 - 19938 7.3 - Term 19828 - 19868 -1.0 26 9 Op 1 26/0.000 - CDS 19962 - 22070 188 ## PROTEIN SUPPORTED gi|149010508|ref|ZP_01831879.1| ribosomal protein S1 - Term 22081 - 22110 2.1 27 9 Op 2 . - CDS 22119 - 22385 343 ## PROTEIN SUPPORTED gi|227499293|ref|ZP_03929405.1| ribosomal protein S15 - Prom 22457 - 22516 6.2 28 10 Tu 1 . - CDS 22522 - 22773 158 ## FMG_1406 hypothetical protein Predicted protein(s) >gi|325479995|gb|AEXN01000048.1| GENE 1 2 - 191 318 63 aa, chain - ## HITS:1 COG:no KEGG:FMG_0965 NR:ns ## KEGG: FMG_0965 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 63 1 63 103 101 100.0 1e-20 MDREMININANLVKEVELSEFERDGEKVDVANFTLIKKYGKGKEYINCSVYGEKSERAKE LDK >gi|325479995|gb|AEXN01000048.1| GENE 2 387 - 1856 1391 489 aa, chain - ## HITS:1 COG:no KEGG:FMG_0966 NR:ns ## KEGG: FMG_0966 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 489 1 489 489 797 100.0 0 MNYEKFKKIINRKTSIIVLDTNVILDLARYSLYSSKNILEIFKECKDLIWIPNQVYKEFN KNKYSVFGQLKKKYQNFEKDLLRVIERSQKNLESVLIKSSKYNYFGRKNLENDLNNKLVE LKQIIKSYKNSVGIEYDEITTDSPEIIKDIDNLISYLEKNNRIGNRIRFSEQLKIIREGE LRYKYKIPPGYEDINKDGVEKFGDLFVWKEILDLPVEKSVKDIIFITNDIKEDWWSKDSQ DNLVVHDKLLSEFKEKNPNVNIEFLTTGMFQNFASKVYDRYDFNVYVDLNRKDVSYVERV KQDISNDIVDSIYNNNYYYLESYVIGSEGIEELDINNCEFNEILDTYEEFTDEIVSITYE LEYLINLSCVSFDYWGRDDDTKEVIQSPPIEQEFSGSVIVNVTRLINKDDIEEDSFYINN DKEYTDIEIIEIQIDQDSINKNEEDYDDSYLEEENYNNDYAFICSKCGKGFKDRREDVGG ICRDCSFND >gi|325479995|gb|AEXN01000048.1| GENE 3 1874 - 2410 593 178 aa, chain - ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 170 1 170 172 255 83.0 2e-68 MRSYESKEELKNEIKKTFGKYISEFDNIPEELKDKRVDQVDRTPAENLAYQVGWTTLVLK WEEDEKKGIEVKTPSDKFKWNQLGELYQWFTDTYAHKSLKELKEQLSQNIEDIYSLIDNL TEEELFKPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKLNNFVNVIK >gi|325479995|gb|AEXN01000048.1| GENE 4 2472 - 3842 1268 456 aa, chain - ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 13 424 157 562 591 218 34.0 2e-56 MNSRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYVVTDPKGTLVLECGKMLY ENGYDIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANTKGDGEKAGEDFWVKAEK LYYTALIGYIYYEAPEEEKNFKTLLDMIDASEVREDDETYMNPIDRLFEALEKKDPSHFA VKQYKKYKLAAGKTAKSILISCGARLAPFDIRELRELMSEDELELDKIGDRKTALFVIIS DTDDTFNFVVSIMYSQLFNLLCDKADDVYGGRLPVHVRCLLDEFANIGLIPKFEKLIATI RSREISASIILQAQSQLKAIYKDHADTIVGNCDSTLFLGGKEKTTVKELSETLGKETIDL YNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGKCIYQLRGVRPFLSDKFDITKHKN YKLLEDYDKKNLFDVEEYLTNRDKIKINRNSLITRL >gi|325479995|gb|AEXN01000048.1| GENE 5 3863 - 4261 208 132 aa, chain - ## HITS:1 COG:no KEGG:FMG_0982 NR:ns ## KEGG: FMG_0982 # Name: not_defined # Def: putative plasmid transfer factor # Organism: F.magna # Pathway: not_defined # 1 100 1 100 350 188 98.0 8e-47 MNKILEAILSDIKNLIKIDNPKKFILSNIPYLSFFYIGNIFSKHINSYVGGDIIDKIMVG ISDIGTLSYIPSLNPRDLLVGISVAGLVKLIVYSKGKTKRNIGKARNMDLQDGEKVRILL HILTLSLKTMFS >gi|325479995|gb|AEXN01000048.1| GENE 6 4254 - 4988 801 244 aa, chain - ## HITS:1 COG:SPy0980_2 KEGG:ns NR:ns ## COG: SPy0980_2 COG3645 # Protein_GI_number: 15674990 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pyogenes M1 GAS # 143 236 31 124 125 108 57.0 7e-24 MISNLKTFENKNFGKLTVIEKDGEFFFIANEVATMLGYVNPRKAIYDHVDEEDKGVTKWN TPGGIQNISIINESGLYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIVGQEKKTNED LLADAILVANRIIAEREEEIEELRPKADYYDKLVDYNLLTNFRNTAKELGIPQNQFISFL MDKGLIYRDKKKKLLPYADKNKGYFEVKEWIDPLGTLVGIQTLITPKGRHYLLILLDSEG FYDE >gi|325479995|gb|AEXN01000048.1| GENE 7 4985 - 5470 685 161 aa, chain - ## HITS:1 COG:no KEGG:FMG_0984 NR:ns ## KEGG: FMG_0984 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 161 1 161 161 194 100.0 1e-48 MINEEVSRSSLNLEVRLAKATSKAILDALKKVHKQIEDQGGLKNVIKNNGEEVKLKDMVK KGQLEEINLKDPELKELKKILNKHGVKFSVMKDKETGNHSVFFQSKDIKVMEHAFKKAVK ASEKKADRKDSITKTINKFKDMAKDTISKDKVKNKHKEQSL >gi|325479995|gb|AEXN01000048.1| GENE 8 5463 - 6290 686 275 aa, chain - ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 22 267 27 277 282 119 32.0 7e-27 MKNLKDFVLRENDIERNGHIYCKVCDKRVDGELLDLGFTKFIPRIKCECEIKRDKENEER ERLMKISSLKRDCFSSPLQHQYNFERFLNEKGQAYKVAYNYAKSFEQMKEDNVGLLFHGD VGSGKTYLACSIANELIEREQVKVKIMNLSQVINQIQKSAFKLDSNEIIDNLSNIPLLIL DDLGIERDTSYAREQVYNIINSRYLKGRPTIFTTNLSLEIIQNPNIELEYQRIYSRILEM TIPVKVTGEDFRRKIHQEKLRKYKELLLYGGGIDD >gi|325479995|gb|AEXN01000048.1| GENE 9 6287 - 7060 757 257 aa, chain - ## HITS:1 COG:no KEGG:FMG_0986 NR:ns ## KEGG: FMG_0986 # Name: not_defined # Def: putative replication initiator # Organism: F.magna # Pathway: not_defined # 1 257 1 257 257 436 100.0 1e-121 MNFDYFYNRQSEMYNFIRLPMVLMEDEIFESISIEAKVLYSYMLNRMGLSYKNGWIDEDG KVFIYYTMDAIKEQFNCANDKALKIINELDIKSGIGLIEKKRQGLGKPNRIYVKDFMSVF SDSNNRNPDFRKAEVQTSDNRNSRTPNNRLQDFRKSEGNYNNISNNELRKNDFSKGQKPY GIYKNIFLTDEEYKDLTNELGSRISDYIDRLSSYMKANNRVYQDYKATIINWYLNDQAKN INDNTTRKMNYDIGESL >gi|325479995|gb|AEXN01000048.1| GENE 10 7144 - 7425 211 93 aa, chain - ## HITS:1 COG:no KEGG:FMG_0930 NR:ns ## KEGG: FMG_0930 # Name: not_defined # Def: putative lipoprotein # Organism: F.magna # Pathway: not_defined # 15 65 1 51 179 78 78.0 1e-13 MRWIIRIILLPIRLVLSLLIAFLTFILSLSTALLSVVSTLIFIIGIASIFQGDKQIVIEA LILAFLFSPFGLPKLGIYVIGLLELLNYTIKSI >gi|325479995|gb|AEXN01000048.1| GENE 11 7489 - 9402 2616 637 aa, chain - ## HITS:1 COG:CAC3197 KEGG:ns NR:ns ## COG: CAC3197 COG1190 # Protein_GI_number: 15896444 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 2 486 20 510 515 540 56.0 1e-153 MANKNQDLNEMLQIRREKLEKLKADGKNPHAIVNFRNRTLSKEIKDNFEEFEGKVVRVAG RIMARRGHGNMSFMDVQDSLGQIQVVNRKNVMGDNFKETKGYDIGDLIGIEGKVFKTNQG EVSIETEHADLLTKSLQILPEKWHGLKDPDIRYRQRYVDLIVNPEVKDVFVLRSKIISEI RRFLENRGFLEVETPILNTIAGGATARPFITHHNSLDIGMYLRIASELYLKRLIVGGFDK VYEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITETMVEYVANKVKGSTVVEFD GNEIELKAPWRRVSMIDAVKEFSGVDFNEITEYEDAVKIAKEKNIEVKDSRGEIIAEFFD EFVEEKLIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFINGSEIANAFSELNDAVDQK ERFLDQVAKREAGDDEAQMMDYDFVNALEVGMPPTGGLGIGIDRLIMILTGQHSIRDVLL FPTMKPIGLEKAENGGLSKETYETYDKLTTEEIDLSKVKVEPLFEDMVDFETFSKSDFRV VKVKNCEEVRKSKKLLKFTLDDGSEKERVILSGIKEYYSAESLIGKTLLAICNLPPRKMM GIDSEGMIISAICEYDGEEKLNLIMLDDNIPAGSKLY >gi|325479995|gb|AEXN01000048.1| GENE 12 9411 - 9884 631 157 aa, chain - ## HITS:1 COG:CAC3198 KEGG:ns NR:ns ## COG: CAC3198 COG0782 # Protein_GI_number: 15896445 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Clostridium acetobutylicum # 1 157 1 158 158 137 55.0 8e-33 MTEQKEVILSKEYLQKLQDELEYLKTKRRPEIAEKIKEARSFGDLSENADYDEAKNEQGE VESRIAKVEDMIRHAKTFEDSTNKDEVSVGSKVLIHDEEFDEDFEYKIVGTAESNPLEGF ISNESPVGEALIGKKKGDKVEVATPNGKCYYTIKEIR >gi|325479995|gb|AEXN01000048.1| GENE 13 9889 - 10554 315 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631300|ref|ZP_00156838.1| COG0042: tRNA-dihydrouridine synthase [Haemophilus influenzae R2866] # 1 215 128 343 353 125 32 2e-28 PLQKSQKNGEGSQLMANPKLVEEICKTLRKSTDKKLNIKFRLGIDDKHINYLDIGKIAQD TGIDYVILHARTKDQMYSGHANWDHIRKLKENLQIPVIANGDIFSVEDFIKVIDLTKADG VMLARGAMGNPFLFKEIKDYIKTGNYNKPSPIEIVDQLIDQYKLELKYKEEKLVVTQMRK HLSWYIKGLENSSKICDLVNKLKTIDEVMDELENYKSTLKG >gi|325479995|gb|AEXN01000048.1| GENE 14 10526 - 10855 299 109 aa, chain - ## HITS:1 COG:CAC3199 KEGG:ns NR:ns ## COG: CAC3199 COG0042 # Protein_GI_number: 15896446 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-dihydrouridine synthase # Organism: Clostridium acetobutylicum # 10 107 12 108 321 88 46.0 3e-18 MREQLKNKQIMLAPLAGVSDVGFRLISEKYGADKTFTEMVSVNALYYDNKKTNDLLFISE NEKNCNIQLFGSKPEVIEKVIKDKINYIDRSKEISFNMGCPVAKITKKW >gi|325479995|gb|AEXN01000048.1| GENE 15 10833 - 11624 1041 263 aa, chain - ## HITS:1 COG:BH0086 KEGG:ns NR:ns ## COG: BH0086 COG1521 # Protein_GI_number: 15612649 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Bacillus halodurans # 1 261 1 254 254 221 41.0 9e-58 MLLVVDVGNTNTVIGVYNKKKLKTKFRITTNQVVTSDELVQILYNILAIHKIDKDNIEDT IISSVAPDVLYSWQSANRKFFGREAIIVGIGTKTGIDIKYDNPREVGADRIVDAVAAYEM YGGPTIVVDLGTASTFDVVNKKGQYLGGSIAPGLKTSLDALINRTAQLPRIELHDPKTAI AKSTTEAINAGMIFGYIGLIDGIIEQLIKEIIKKEKISKEEIKIVSTGGYSELLASESRY IEIVENDLTLEGLRLIYERTIKK >gi|325479995|gb|AEXN01000048.1| GENE 16 11697 - 12191 574 164 aa, chain - ## HITS:1 COG:no KEGG:Apre_0624 NR:ns ## KEGG: Apre_0624 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 164 4 163 163 158 49.0 7e-38 MNNQFDRFIILIYLGLIAWLGYKFFKSIKSKKNLEGQVKSFGKRSSTMEYILFGLLILTG AINLYQGIKTNNKSALMTASVMIVMGLVFFLNTKTKIYIAENGILLNDSFFTYKQLKRWG FDKERGNLVILTKKDHQESQESTQVKKEDINEINNLIRKYKLGK >gi|325479995|gb|AEXN01000048.1| GENE 17 12283 - 12834 658 183 aa, chain - ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 5 183 1 178 178 187 54.0 1e-47 MKTDLEEIIDQVLIDEESLNKRIKKLANQVNEYYEDKNELVLVGILKGSIMFMAQLAKSI KINCTLEFMDVSSYEDGTESSGNVKIIKDLDTDISGKEVLIVEDIIDTGRTLDALRHSLI KRGANSVKIITLLDKPERRVIEIKPDWTGFKIPNEFVVGYGLDYQQKYRNLPFIGVLKRE VYE >gi|325479995|gb|AEXN01000048.1| GENE 18 12831 - 14222 1215 463 aa, chain - ## HITS:1 COG:CAC3204 KEGG:ns NR:ns ## COG: CAC3204 COG0037 # Protein_GI_number: 15896451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Clostridium acetobutylicum # 7 461 1 458 461 225 37.0 1e-58 MCTKTKIISSFKNTVEKHRLIEENDTIIVGASGGPDSQFLIYLLNELKDFYKIDIILAHL NHMHRQDAIDDENLVIETGKKLSLKTYVSHKSMDDYAKEKKISSENAGRILRYEFFNSLK KNYKNAKIAVAHNMDDQAETVLMRIIRGSGLDGLKAMDYKNGHIIRPIMDFKKSQILKFL DYNKIDYHIDYTNLQRDYTRNKIRLDIIPQIEKINPNFKKSLVNLSEVSKSDYEILKDIE DDIFEKILVKKVKNKLSFDKIRFENLSDPLKMRLIRRAIFVLYGNIKDFSKINIEELLKI TDLDTGKKIIKNNLILQKNYKTYDFFIKEKENKEKNQKEIYLTINDDKIFNSFKFKTSII SYEIYKKIEKGKREFFALDDLDDISIKVRYRINGDYFTYLKGGKRKKLKNYFIDEKVDKN LRDKIPLLFINDKLCLIVGKRRSEDFKVSEKSKKILMVSVEEL >gi|325479995|gb|AEXN01000048.1| GENE 19 14194 - 14511 370 105 aa, chain - ## HITS:1 COG:no KEGG:Apre_0621 NR:ns ## KEGG: Apre_0621 # Name: not_defined # Def: septum formation initiator # Organism: A.prevotii # Pathway: not_defined # 1 105 1 105 105 62 41.0 7e-09 MNKYERYIKNRSKKNTRFLIMVFLVFILTFFLTRAFNKNMNRQRLSLKENIKETNTKISK VKKEIDTIKKDYENRNTDDFKEKIAREKLGMIKKDEYVYKDENNK >gi|325479995|gb|AEXN01000048.1| GENE 20 14504 - 14749 437 81 aa, chain - ## HITS:1 COG:CAC3210 KEGG:ns NR:ns ## COG: CAC3210 COG1188 # Protein_GI_number: 15896457 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Clostridium acetobutylicum # 1 79 1 79 84 74 54.0 4e-14 MRIDKFLKNSRIIKRRQVAKDACLNERVKINGDIAKAGTNVNPGDIIEVSFGKRNLKVKV LDLIDGAKKNDAGEMFEVIDE >gi|325479995|gb|AEXN01000048.1| GENE 21 14850 - 15893 1074 347 aa, chain + ## HITS:1 COG:SMa2355 KEGG:ns NR:ns ## COG: SMa2355 COG0389 # Protein_GI_number: 16263727 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Sinorhizobium meliloti # 1 344 26 377 379 239 38.0 4e-63 MNKILHIDCDAFYASCEELRNPKLKNHPMAVGGLSNKSIITTANYKAREYGIHSAMPVFI ARQLCPNLIIIKVDRTYYKEKSKEVFDIIESYSHIKEQVSIDEAYIFIDNNEDKKIIAKK IQNQVLKQTGIGVSIGISYNKFLAKLASDWNKPFGIKEINEDDIPNILEDLDIKKVHGLG NKSVEKLKDIGIYKIKDLLKLDQEFLESLFGKQGRYVYKVIRGEDKRKVETSTKRKSIGR EFTFRKNTKDMNILYSYIDEISRKIENDLKAKDIKAYTINLKIKTEYFKTHTKSLTLSSP ISKKEEISGIGKDLLDQIISNEKLRLLGISLSNLSKKDHKQLSLFDK >gi|325479995|gb|AEXN01000048.1| GENE 22 15938 - 16987 1648 349 aa, chain - ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 8 346 3 343 349 437 66.0 1e-122 MAGEKDKDKEKALSQAFKNIEKKYGKGAIMKMGEAPKVDVTVIPTGAINLDMALGVGGLP RGRVIEIFGPESSGKTTLTLHCIAEDQKLGNTCAFIDAEHAMDAEYAKRLGVNIDELILA QPDTGEQALDIAESLVRSAAVDLIVVDSVAALVPRAEIEGEMGDSHMGLQARLMSQALRR LTGIISKSNTTVIFINQLREKIGVMFGNPETTTGGRALKFYSSVRLDIRRIKTIQQGDNM VGNRTRVKVVKNKVAPPFKVVEFDIMYGTGISKSGVILDSAVDKDIVEKAGSWYSYNGEK LGQGRENVKQYLEENEDILNEIENKLRESINPDTNKEEKKEEEIQEDEE >gi|325479995|gb|AEXN01000048.1| GENE 23 17012 - 17542 336 176 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 4 171 483 669 904 134 41 7e-31 MNIANKVTTVRMFLVPVFVVLYLIFGRMYNVAAILYAVASLTDALDGHLARSRNLVTTFG KFMDPLVDKILTMAGFVLLTSTNIIPSWAVILIIARELIITGLRTLAASNNITIAASKGG KAKTMSQCVSTVLLLVNNPSLNTIGLVLFYVAVILTVFSGIDYLVKNKKVLNLDDI >gi|325479995|gb|AEXN01000048.1| GENE 24 17544 - 18929 1484 461 aa, chain - ## HITS:1 COG:CAC1812 KEGG:ns NR:ns ## COG: CAC1812 COG1674 # Protein_GI_number: 15895088 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 11 454 318 761 765 499 59.0 1e-141 MDDRDHEGEVDQVDIKDKAKRIEECLDSFGIKSKVVQINIGPTVTCFELKPQRGVKVSKI LNLSDDLSLALATSDIRIEAPIPGKSHVGIEVPNSVKEVVGLKEMIASEEFIKNNKELPF VLGKSISGSPKVSAIEKMPHLLVSGATGSGKSVCINTIIMSILYKHSPDEVKLLLIDPKI VELSIYNGIPHLIMPVITDPKKASSSLFWAIREMERRYKLFEENHVRDISSYRDLTEIDE KIEKLPYVVIIIDELSDLMMTAAGEVEDYITRLAQKSRACGIHLIIATQRPTVDVITGTI KANIPSRIAFAVTSQIDSRTILDMSGAETLLGKGDMLFSPSDAMKPMRIQGAFVSDSEVL RVVNYIKQTREEEYDKEAMETVEEKTKVVENDDEDELINEAIEIIINENTASVSLLQRKL KVGYARAGRIIDQLEARGVVGGYEGSKPRKVLVDHSYLEGE >gi|325479995|gb|AEXN01000048.1| GENE 25 19163 - 19801 352 212 aa, chain - ## HITS:1 COG:no KEGG:Apre_0616 NR:ns ## KEGG: Apre_0616 # Name: not_defined # Def: cell divisionFtsK/SpoIIIE # Organism: A.prevotii # Pathway: not_defined # 1 187 1 194 770 93 35.0 5e-18 MANTNNNRKRKKSKYGKKSPNPKFNKKSFSIFCMFISLLGFIFLILPNTGSLGDFITYTN FKIFGFMSYFVFAFIFTSFLFAFRDKFKENLRVFNIIFILIILTMAILSLKYLGKNLNIS IKNTQTSLKKSGGFLGTYIGFYLESFIGSAGIIIFYILMWIALLKNMLGLSYKDFLSRIK EKSQIIGNILWKSYMKISNKIKTYFKEKNLKK >gi|325479995|gb|AEXN01000048.1| GENE 26 19962 - 22070 188 702 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149010508|ref|ZP_01831879.1| ribosomal protein S1 [Streptococcus pneumoniae SP19-BS75] # 489 700 138 364 400 77 28 1e-13 MEKTYEYKSQNGSDLSITIGKVAEQTNGECLIRSGDTILLVTAVASDKPREGIDFFPLIC DYQEKLYAVGKIPGGFIKREGKASDKAILISRQMDRPLRPLFPENFYNDVQVIATPFSVD EDNEPDCMTTIGASIALGISDIPFYGPVAAVSVGYVDGKFIVNPNKDQREKSSLDLTVAG TADAINMVEAGANELSEDEMLEAMMVAHAEIKEICSFIQTIIDDIGKEKMEVAEEVETEL QRKIKDKYTEDIKNSIRTTDKVQREDDINAIEEKCREDFLEEFPESEDEIHKTVDSIMKK EVRRMISIDKIRPDGRKMKEIRPLSAEAGLLPRAHGSGLFQRGQTQVLSVLTLGSPGEEQ VIDSMNREEITKRYIHQYNFPPFCVGDIRPLRGPGRREVGHGHLAERALIPVLPDTKDFP YTIRVVSEVLSSNGSSSQASICGSTLSLMDAGVPIKKPVAGIAMGLIKEEDSISILTDIQ GLEDHLGDMDFKVAGTKDGITALQMDMKISGINKEVLQEALADAHEARLKILDVITSAID KPREDLSKYAPRIFSIDVDPEKVRDVIGAGGKTINKIIDETGVKIETEDDGHITVASNDG DSGKKAIEMIKSIVTDPKAGDIYEGEVKRIMNFGAFVEIAIGKEGLLHISQIDTKRTEKV EDVLKIGDKVRVKVTEIDRQGRINLSRKALLIEEEKKQSKED >gi|325479995|gb|AEXN01000048.1| GENE 27 22119 - 22385 343 88 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227499293|ref|ZP_03929405.1| ribosomal protein S15 [Anaerococcus tetradius ATCC 35098] # 1 87 1 87 88 136 74 1e-31 MLNKDQKTQIIKEFQKDEKDTGSPEVQIAILTQRIKELTEHLKVNKKDHSSRRGLFKMIR RRKGLLNYLMKNDIERYREIIEKLGLRK >gi|325479995|gb|AEXN01000048.1| GENE 28 22522 - 22773 158 83 aa, chain - ## HITS:1 COG:no KEGG:FMG_1406 NR:ns ## KEGG: FMG_1406 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 83 151 233 234 83 66.0 3e-15 IFGAIAIRVKSFGITVFLSSIFTIVGFITAFKSLKIIGLSFLAIESNNFRLISIVDILIL AFFAIGELILFLYLSNKFLKYEN Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:24:59 2011 Seq name: gi|325479993|gb|AEXN01000049.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00058, whole genome shotgun sequence Length of sequence - 1307 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 1198 1100 ## XCC0340 hypothetical protein - Prom 1232 - 1291 7.3 Predicted protein(s) >gi|325479993|gb|AEXN01000049.1| GENE 1 1 - 1198 1100 399 aa, chain - ## HITS:1 COG:no KEGG:XCC0340 NR:ns ## KEGG: XCC0340 # Name: not_defined # Def: hypothetical protein # Organism: X.campestris # Pathway: not_defined # 7 164 6 163 277 126 36.0 2e-27 MPRKGVTIYDLLISCPGDVTDFLEIIKESVESFNRTFGDLNNIEVVTKHWSTNSYPESGD KPQELLNKQFVRNCDAAVAVFWTRFGTPTDKYGSGTEEEIEEMLLANKQVFMYFLNAPIN PSEFNQEQYQKVLEFRGKYKDKGIYAIVDDKFDFQRQFTNHLSLYFLSLIWDSGNSKSVI LNPMLKIRDLNTFSEEYCSISMNKLLESKFINNQKDKIIESIETLNNFILPERSKDISSE KYNFNELTNITKSYGQISKLSGINNYVEISDEWIKAINDFANKNQINIEENFWNLGNLKS YSSQLQLPFGSSGPSYYGTDEEKKRYSLLKKLYISIKEYNEYNEYFGYIDNVKVIKLMIS NLGNTFDEDIDIKLIIPKGYILKHKDLPDPGMNIIEDLL Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:25:13 2011 Seq name: gi|325479967|gb|AEXN01000050.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00041, whole genome shotgun sequence Length of sequence - 25538 bp Number of predicted genes - 23, with homology - 23 Number of transcription units - 11, operones - 6 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 29 - 670 696 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 2 1 Op 2 . - CDS 724 - 1731 888 ## COG2267 Lysophospholipase 3 1 Op 3 . - CDS 1733 - 1933 304 ## gi|325849753|ref|ZP_08170900.1| cold shock protein CspB 4 1 Op 4 . - CDS 1936 - 2664 689 ## COG0500 SAM-dependent methyltransferases 5 1 Op 5 . - CDS 2664 - 5291 3095 ## COG0525 Valyl-tRNA synthetase - Prom 5317 - 5376 11.9 + Prom 5628 - 5687 9.5 6 2 Op 1 1/0.000 + CDS 5715 - 6536 758 ## COG1806 Uncharacterized protein conserved in bacteria 7 2 Op 2 . + CDS 6529 - 9159 3852 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase + Term 9174 - 9207 4.0 - Term 9157 - 9201 8.3 8 3 Op 1 . - CDS 9220 - 10173 1223 ## EUBREC_2028 alkyl hydroperoxide reductase 9 3 Op 2 . - CDS 10163 - 11044 748 ## COG0348 Polyferredoxin - Prom 11282 - 11341 10.4 + Prom 11222 - 11281 7.8 10 4 Op 1 40/0.000 + CDS 11306 - 11980 637 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 11 4 Op 2 . + CDS 11977 - 12879 1067 ## COG0642 Signal transduction histidine kinase + Term 12975 - 13008 3.0 - Term 13084 - 13131 5.7 12 5 Tu 1 . - CDS 13132 - 14097 1216 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 14124 - 14183 2.8 - Term 14215 - 14247 2.0 13 6 Op 1 2/0.000 - CDS 14252 - 15745 1370 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 14 6 Op 2 2/0.000 - CDS 15738 - 17408 1446 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 15 6 Op 3 . - CDS 17408 - 19078 1081 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 16 7 Tu 1 . - CDS 19179 - 19334 171 ## SPAP_0909 hypothetical protein - Prom 19364 - 19423 2.2 - Term 19807 - 19859 12.2 17 8 Tu 1 . - CDS 19877 - 20287 274 ## SPAP_0908 hypothetical protein - Prom 20393 - 20452 6.0 - Term 20379 - 20418 5.3 18 9 Tu 1 . - CDS 20557 - 21078 524 ## MGAS10750_Spy1715 hypothetical protein - Prom 21175 - 21234 7.5 + Prom 21134 - 21193 7.2 19 10 Op 1 . + CDS 21267 - 21668 676 ## MGAS10750_Spy1714 transcriptional regulator, Cro/CI family 20 10 Op 2 . + CDS 21677 - 22225 659 ## COG2856 Predicted Zn peptidase 21 10 Op 3 . + CDS 22234 - 22716 375 ## SPAP_0904 hypothetical protein 22 10 Op 4 . + CDS 22709 - 23791 1086 ## COG3943 Virulence protein + Term 23925 - 23966 4.3 - Term 23909 - 23959 10.4 23 11 Tu 1 . - CDS 23998 - 25536 223 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P Predicted protein(s) >gi|325479967|gb|AEXN01000050.1| GENE 1 29 - 670 696 213 aa, chain - ## HITS:1 COG:SP0860 KEGG:ns NR:ns ## COG: SP0860 COG2039 # Protein_GI_number: 15900744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Streptococcus pneumoniae TIGR4 # 1 211 1 212 214 252 57.0 3e-67 MKILLTGFDPFGEDKINPSIELVKKVEEKIGNAEIFKLEIPTVFKKSGKILEENIKRIRP DVILCIGQAGGRSSITVERIAINIDDARISDNLGEKPIDEKIRDDGDNAYFSNLPIKKIV EEIKKENIPAEISNSAGTFVCNHLMYESLYLAKKYKNIRAGFIHIPYLPEQVINKANTPS MDLENSLKAINIAIKTIINHNGEDVKISGGKIS >gi|325479967|gb|AEXN01000050.1| GENE 2 724 - 1731 888 335 aa, chain - ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 51 329 7 295 306 118 32.0 2e-26 MKYFILILFIILLPQIYYLYRKKTYLDLKNGSRFFIKEESFINDNRCKVILTNSDGFDIY ANRFDVENPKAVVQIVHGMLEHSLNYLHFIKFLNEKGYAVVISDNRGHGKSISENHPSGF IKEKDELVDDQFVINKYIRMYYKDKKVFMLGHSMGSLICRNYLQKYDYTIDKLVLTGTVA YIPIAKIGIFIGNILTFYLGEKRRSHLLDMLSGITGKDPSWISYNEENVRIKNNDPMRLS GFLARSNVCLFTLVNDLNKNKKYKLKNENLPIASLNGVDDDVTGGDKGLKNTQKILSSLG YKNLFFKSYNHMKHEVLNEDNRLEVFEDIEMFFKK >gi|325479967|gb|AEXN01000050.1| GENE 3 1733 - 1933 304 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325849753|ref|ZP_08170900.1| ## NR: gi|325849753|ref|ZP_08170900.1| cold shock protein CspB [Anaerococcus hydrogenalis ACS-025-V-Sch4] cold shock protein CspB [Anaerococcus hydrogenalis ACS-025-V-Sch4] # 1 66 1 66 66 102 100.0 6e-21 MEGKVRFFDEKKGFGFIESESGDYFFHYSEIISDKDYKTIENGARVEFDVKDLGRGDTAF NVKKRS >gi|325479967|gb|AEXN01000050.1| GENE 4 1936 - 2664 689 242 aa, chain - ## HITS:1 COG:CAC2371 KEGG:ns NR:ns ## COG: CAC2371 COG0500 # Protein_GI_number: 15895638 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 2 240 4 244 252 121 36.0 1e-27 MYKDFAYIYDKLSFDLGYEKYADNIKSLVDKNNIEREKMLELACGTGMLTNHFFDFFEKI DALDLSQSMLEVFSKKFQEEKVSLYNYNMVDFENENSYDLIVILLDSINYILDEDDLKKL IENSYKNLKKGGLLIFDINSEYKMEEVFGSKSYIYEYEDIFYTWDNIKDDDIIDMELNFF VENDDGTYQRIIENQVERYYSVDFMKNILIENNFSDIEIFDEDDMGEIKDNTLRILFKAK KE >gi|325479967|gb|AEXN01000050.1| GENE 5 2664 - 5291 3095 875 aa, chain - ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 867 7 875 881 975 55.0 0 MQTKYEPQKFEKDIYKKWEDGGYFKARVNKDKKPFTIVMPPPNITGKLHLGHALNNTIQD IIIRYKRMQGYEACWIPGTDHASISTEAKVVGKIKSEGKSKDELGRDKFLEECWDWTEEY GGTIKKQLRTVGVSCDWDRDSFTMDKNLTRAVRKVFKKMYDDGLIYRGNRIVNWDPEAKT ALSDAEVYHKDQEGHLWYIKYFFEDSDEFITIATTRPETMLGDLAVAVNPEDERFKDKIG KNLILPLVGRKIPLIEDSYVDMEFGTGCVKITPSHDPNDFEVGKRHELGQCIVIDESAKI KEGYGKYSGLDRYEARKIMIEDLEKENLLVKTETIEHAVGYSERTNVVIEPLISKQWFVK MEDLAKDAIEVYKNGDLNLIPDSLGKTYLNWLENIRDWCISRQLWWGHRLPVFYTEDGEI IVSEDDPDENGYLNGKKVTQEEDTLDTWFSSALWPFATLGWPEETEDYKYFFPTDILVTG YDIIFFWVIRMVFSSLYNTNKTPFDHVLFTGLIRDPQGRKMSKSLGNGVDPIDVVNKYGA DALRFTIITGNSPGNDMRYDEKRIVASRNFANKLWNATRFVLMNIDESDDLEFNNLDLSL EDKWILKRLNNVVEEVSKNLDKYEIGLAASRIEDFIWEEFCDWYIEFAKERLNSSDENKK STVKKVLLYVLKDMISLLHPFMPFITEEIYKQLPNKKDMLIVESWPEVREDFNFDDEARG VDGAIEAIKAIRNQRQTLNLGSKTRQDLIIYSSDENTRKFLEILKGQFVNLSKSGEISII DEDKEVEDAVSLIFNDFKIYIPLENLIDYDKERKRLKDEIKKLESEIKRAEGKLNNQGFV SKAPEKVVNEEREKLEKYKDLLVKTQESYKEIEDK >gi|325479967|gb|AEXN01000050.1| GENE 6 5715 - 6536 758 273 aa, chain + ## HITS:1 COG:BS_yqfL KEGG:ns NR:ns ## COG: BS_yqfL COG1806 # Protein_GI_number: 16079578 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 5 267 6 268 270 168 36.0 1e-41 MKLSVNIISDTSGFATEQIVKVSLSQFDVETITNIYPDVRNLDALKDILNFIIETGDNFM IYHSFQDSRMNVYINKFCELNNISYVDITGYSIRTIAEKVGLEPKNTFSSESLYETDHFK TLNALDFAIKYDDGKDFRSLKVCDIALIGVSRSSKTPLSIYMASRGYKVCNIPLLLNASL PDELFEIDSDKIIGLTIDKNILKSFRDERLKSLNLSGKSQYSNLNIIQKELDHAKEIMDD LGCVIIDVTNRSIEETSDIIINHINSRKGEKND >gi|325479967|gb|AEXN01000050.1| GENE 7 6529 - 9159 3852 876 aa, chain + ## HITS:1 COG:lin1981 KEGG:ns NR:ns ## COG: lin1981 COG0574 # Protein_GI_number: 16801047 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Listeria innocua # 4 860 3 860 879 985 55.0 0 MTEKYVYNFNEGDKDMRSLLGGKGANLAEMTNMGINVPYGFTVTTEACARFYEEDKKLWN DLNDEITSHIKDLEEHNKKTFGSTEDPLLVSVRSGAPISMPGMMDTILNLGLNDDAVIGL SKKTNNERFAYDSYRRFIQMFADVAMGINKNNFEKVLSAKKAEKNVEEDTALDANDLKDV VESYKKVYKEIQGEDFPQDPRDQLDKAITAVFASWNNERAILYRRLNDIDDSMGTAVNVQ SMVFGNMGDNSGTGVAFSRNPATGENKLFGEYLMNAQGEDVVAGVRTPKEIATLKDSMPD VYKQFHDTSEKLEQHYKDMQDMEFTIQEGKLFLLQTRNGKRTAQAAVKVAVDLVHEGLLD EKEAILRVDAKDLDGILHPTLSEKSKKENQPVAKGLAASPGAAVGYIAFTAKEAKDRAAK GINVILVREETSPEDLEGMVSASGILTARGGMTSHAAVVARGMGKCCVSGAHDIYVDEIE RFVRIDGKKYTDKDTISIDGSTGNIYIGSLETENPKLEGDFGEFMGWVDKYRDIKVRTNA DTPHDAKQALEFGAEGIGLCRTEHMFFKADRIFQVRKMILAHNSETRKEALDKILPMQED DFYQIYSLMGERPVTVRLLDPPLHEFLPRGQEEIRTLAEDLNMEISEVKKRILDLEEVNP MLGFRGLRLGVRYPEISKMQARAIIQAAMHCHEDGIKVVPEIMIPLSSDVKELAYVKSKV REEIEKVFEEKGKKIDYLLGTMIEIPRAAITADEIGEITDFFSFGTNDLTQMTFGLSRDD AGKFLGLYLDKDIFAKDPFQVLDQKGVGFLVETAVERGKKANPNLHLGICGEHGGEPTTV KYLYNVGLDYVSCSPYRVPIAKLAAAQEAIEHPRNK >gi|325479967|gb|AEXN01000050.1| GENE 8 9220 - 10173 1223 317 aa, chain - ## HITS:1 COG:no KEGG:EUBREC_2028 NR:ns ## KEGG: EUBREC_2028 # Name: not_defined # Def: alkyl hydroperoxide reductase # Organism: E.rectale # Pathway: not_defined # 1 313 1 293 300 194 38.0 3e-48 MKNKKLQISALALALAFTFVGCGKKENTENSTSNKTSVESKVNDKENAKDNLSSDKSSMD SNDQSVDDLMQKQNDILQKHDKQWQVAFSKADKSKIAGEPDVSYDAYLLDLVEKSKDELS KEDYDLLKKDVEEIGKIEKIINKKKGIDEQFNKGKKKESASTKELKLFPEFKSKDFDGNE VTKEIFKDKKLTLVNFWFNGCAPCVGEIPRLQKLNDEIEKMGGQVIGINTEAKAGDEEII KEAKKILKKQGATYKNISLDPDSELGKYAEQIMSYPTSVLVDSDGNIVGDPIVGAIDKKD TYNKVKTMIEKIIKDEI >gi|325479967|gb|AEXN01000050.1| GENE 9 10163 - 11044 748 293 aa, chain - ## HITS:1 COG:MJ0750 KEGG:ns NR:ns ## COG: MJ0750 COG0348 # Protein_GI_number: 15668931 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 82 282 52 236 238 89 31.0 5e-18 MKSIFLAKYRLLIQIVATLLTNIHLPNFLKGTIYRGKFKKICVPGLNCYSCPAAAGSCPI GAYQAVVGSSKFKFSYYISGFLIFVGVVLGRVVCGFLCPFGFFQEILHKIPTKKFSTEKL KILTYLKYIILLVAVIILPVFLTNKLGMGNPYFCKYICPAGVLEGAIPLSLVDSSIRASL GSLFNLKLTILIISIVLSIIFFRPFCKWICPLGAFYALFNKISLFKIIFDKSKCISCKKC KKACKMDVDVRKDQNHTECIRCGMCIKACPTCALKYEFGLDKTKEIKGEKNEK >gi|325479967|gb|AEXN01000050.1| GENE 10 11306 - 11980 637 224 aa, chain + ## HITS:1 COG:SMc00458 KEGG:ns NR:ns ## COG: SMc00458 COG0745 # Protein_GI_number: 15964767 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Sinorhizobium meliloti # 1 221 1 217 223 175 42.0 6e-44 MKILIVEDEQILNDTINKSLKKSGYEVESAFDGINAMEMIEIESYDLIILDLNLPHMDGM EILKNLRKEDEETKVLILSARSQIKDKVEGLDAGANDFLQKPFHLDELKARVRSLTRRNF IQKNSEISFDKIEFDSKNRRVFVDGEELKLTRKEIGILEYLLLNQGRPISQEELIEHVWD SSVDLLSNSIRVHISALRKKLKNKLNYDPIENRIGVGYLLRKIK >gi|325479967|gb|AEXN01000050.1| GENE 11 11977 - 12879 1067 300 aa, chain + ## HITS:1 COG:DR0744 KEGG:ns NR:ns ## COG: DR0744 COG0642 # Protein_GI_number: 15805770 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 92 218 270 396 566 86 34.0 5e-17 MKKISLRLRIAILTSILIALTSISLNFFTNKTAYFYIDSLGGFVDEAKDEDLYINIDKDK IVNFENNFSNQINTTKINYTKKSWLITSLITILGGLISYFLSGKFLQPLDDFSKQIEQIQ LKNLTSYEVKENPIKEFENLTKTFNQMLERLDKSYEIERDFTARAAHELRTPLTIINSQI DLYEESEMDEKETKDLMDKIKTESDRLSKLVTSLLDLSELRSVSRNEKIELSSLIEEAIQ DLSFIADKKNISIQNMCQEIYILANDTLIYRVFYNLIENSIKYNVENGYIKIYSKKIMIL >gi|325479967|gb|AEXN01000050.1| GENE 12 13132 - 14097 1216 321 aa, chain - ## HITS:1 COG:FN2053 KEGG:ns NR:ns ## COG: FN2053 COG1301 # Protein_GI_number: 19705343 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 1 303 93 393 395 306 54.0 5e-83 MSSNIFPAFISQDQVSKIQASSKIEVNPFFEVPITPFFDVTSAIIFAFMMGISISWLRKH GKGEFSYGLIGEFNEIITKVLSTAIVPLLPFFIFGNFSKMAFTGSVFAVLSIFWKIFLCV IALHLLYISALFIINGVYTKKNPVVLIKNQIKGYLTAVGTQSSVATIPVNLECAKQNSVS KGIRDFVIPLGATVHMPGSMITITACTFTILTMYGMDHSYLLMLRYMAILGIAMVAAPGA PGGAVMSALPFLPVVGIPSEGELASLLITLYLTQDSFGTAANISGDTAISVGIDKIFNKH IVKNNDYKDGFNDEIINAKEI >gi|325479967|gb|AEXN01000050.1| GENE 13 14252 - 15745 1370 497 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 309 10 301 301 173 36.0 5e-43 MSKIALYIRLSVEDMIKTDESESIINQRAYLNDYLDKNEEFKNFTREEYVDDGYSGTNEN RPAFQRMLEDVKKNNIQTIIVKDLSRFMRDYITLGDYLENIFPFLGVRFIAINDGYDSDK EKGNGTDLDIQFKGLLYDFYTKDISEKVKSSMTTLKKQGKFLAWSPPLGYMKDPNDRHKI IVDEETAWIVKKIFKLALDGISSRNIAKILNEEKIPTPSKRKSELTNLDFEYSIIRTAKK PRPTWTNGNVIDVLANENYTGTYTFNMQDKSVLNPSSFKFKPKEEWGRVENNHEAIISRE DFEKVQKIKEKNLFMKGKNTDYEWRKKSPLQGFAKCPTCNHILGCIQSKRKRQDGSIRVH TYFTCRICKCNNVKHKNSRAGSLEEQVFEAIKEKYGLEDSNKDEKVKVKPMEKSIEDLEA KKMQNFEKYKLGKMNRQKFIDSKNLIDEEIQAIKEKMLKAKEEKEVIDNTKLTRELMGKY IDSVFCEGNEVLNIIWK >gi|325479967|gb|AEXN01000050.1| GENE 14 15738 - 17408 1446 556 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 24 318 10 301 301 131 29.0 5e-30 MARTSKRYIEKKSEKTERKVFKAGIYTRLSNERTEEWREKSYSIETQILSCKEYALKENI DVLEVYTDYEYSGTNFERPSFQNMMQDIRDRRINCIIIRDLSRLGREYLEMGRLIDKVFP FLGVRFISVNDKLDTVKETDSKKSFEVTLKNIINDMYAKDISVKIKTSKHNRARNGYFIG SVPPYGYKIKKSKEGQKLVIDENVRFIVEEMFDLTLQGKSQYEVAKHFNEKGYAPGMIYY KTGRVYRENDDPEWNKGTISKMLTNPAYTGTLVQGVKQQNLAKGIKQHFVDESQYIICEN AHEAIISKEVHERILRERQERKKNHVFSSPMHNFENRDYENRFKGLVINNNTGKELNRRT RIYGKNKDRLYYSFQNERFSGSIKPEKSVFIMERDLDQAISDKISEFIMKTTSKTKFVNR IKARFNNAIDTFKKDIENLKRKNLNEENIIQRAYEEYSLGKIDRDEYLLRREIVQSHMAT FDNEISAIEVNISQLKKERLKSTKWINDLYASKNLEKLTGDLIHSLIEKIIVYDKHEFEI VFKFNIDNLVGGTDDE >gi|325479967|gb|AEXN01000050.1| GENE 15 17408 - 19078 1081 556 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 2 300 6 300 301 185 33.0 2e-46 MEKFACMYLRLSREDGDSTESNSISNQRQIIKSYARDNDFKVVAEYVDDGFSGSNFDRPK FKKMIQDLEEKKFKTIIVKDLSRFGRDYIESGKYLQKIFPEKGIRFISVNDNYDSENADV SDTHLILPIRNFINDSYCRDISMKVKSSKEIKRKNGEFIGAFAPFGYKKDSKNKHKLVVD TEVSHIIERIFNMKIDGYSSKAIADFLNSIGCVTPSKHKENSGDNHTTGFIVKDSKWDAK MVNRIITNKVYIGVLEQGKTRKLNYKSKREVEVNEEDWIVINDSHKPIISKSIYALANKM MLRDVKQSADIPHILSGMLYCKDCGSSMVRRKVKSKNGYNIFYICSHYNNKGDCTRHSIK EDYLLDMTLFALKDYLKKYNELLSQVNKLDVSKVTFNIDFESLNSEKRKYERLRQSLYMD LEDELITSEEFERFRKNYLIKIREIEKQIATKKNILANLQEKMKNKDSLVSEIVPTDLSS LNRLTIVSFIDRIEIGENNEINYVFNNLETVNLLKTLIKEESENKSEVKKNLISINKVFG NALENKTPMKLAGGVL >gi|325479967|gb|AEXN01000050.1| GENE 16 19179 - 19334 171 51 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0909 NR:ns ## KEGG: SPAP_0909 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 51 23 73 73 63 98.0 2e-09 MNTKEKKKYKPKEQISKEDYSKKITYTQSDKESLDLLDIVELYLCRACIRL >gi|325479967|gb|AEXN01000050.1| GENE 17 19877 - 20287 274 136 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0908 NR:ns ## KEGG: SPAP_0908 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 136 1 136 136 206 97.0 3e-52 MDKEYYLFVEGKKVVVSKEVYLAYHSELNKEKYQKRRDRLNNCFFFCSYDRDGNFEENLE NLEFDVEKIIETKEMIEEVRRAISKLNPVERDLIESLFYKEETIREVASKLNISHPAVIK RRNKVLEKLKEMLEDF >gi|325479967|gb|AEXN01000050.1| GENE 18 20557 - 21078 524 173 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1715 NR:ns ## KEGG: MGAS10750_Spy1715 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 173 14 186 186 310 97.0 1e-83 MNLYADSNLKFEEISSAAKLILSLYRQVTWAVDSRANFMMFESKENYGSTSESAYLYLST FAPERVEEKFNNRVSNVMDSKLMLLIIYDACVRLKVYPEYGEIYHKIIYNYYIAEKKITD EACMRSVSLERTVYYQRKKEAVALVGVIIWGYTLPTAISQLEEGRSIDDIMNI >gi|325479967|gb|AEXN01000050.1| GENE 19 21267 - 21668 676 133 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1714 NR:ns ## KEGG: MGAS10750_Spy1714 # Name: not_defined # Def: transcriptional regulator, Cro/CI family # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 133 1 133 133 217 100.0 1e-55 MAFADRLKEFREKEKLSQADFAKMIGISTRTLVHYEDGERYPRDVEVYKKIAEVMDCDYN YLLEESDEFLNRVYNMGGKRELEKARALTEGLSSLFAGGEISDEDKDAAFEAITRAYWEA KRENKKYGRKKKD >gi|325479967|gb|AEXN01000050.1| GENE 20 21677 - 22225 659 182 aa, chain + ## HITS:1 COG:lin1233 KEGG:ns NR:ns ## COG: lin1233 COG2856 # Protein_GI_number: 16800302 # Func_class: E Amino acid transport and metabolism # Function: Predicted Zn peptidase # Organism: Listeria innocua # 14 117 10 111 139 61 39.0 8e-10 MSMNRYIYDKVNRLIKKYKTRDPVELIEALNINLVYLPKTEILLGMYHYIQRNRFIFISS NTNFNRKTILAHELGHDQLHRDYCMRGGAFHDQTVLNPTNKFETEANIFAAHLLISDEDV LDNINDQVCDYEIAGQLGVDINLLNLKISELAKMGKFNKPINVNIPQGDFLKNYRPEHDD YY >gi|325479967|gb|AEXN01000050.1| GENE 21 22234 - 22716 375 160 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0904 NR:ns ## KEGG: SPAP_0904 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 160 1 160 160 205 91.0 5e-52 MGIFIAGYFLLILSGIAFYYLITTYSVKISAFLIDFIVVGLGFYISIKDKLDNKLAIPLS ITVVIIYGILLVLINQKLPKISKLLNYIIAFIGSSVALWLALDFITNTLAAFKIIGQTYH QLPITKNMMINSFIHYVIVFIISIPVFKGRMKFILGGTYE >gi|325479967|gb|AEXN01000050.1| GENE 22 22709 - 23791 1086 360 aa, chain + ## HITS:1 COG:STM3755 KEGG:ns NR:ns ## COG: STM3755 COG3943 # Protein_GI_number: 16767039 # Func_class: R General function prediction only # Function: Virulence protein # Organism: Salmonella typhimurium LT2 # 21 357 8 345 345 269 43.0 7e-72 MSKEMDKNKDENHDKKELQIRSSAAEYLTFIAANGDDQEAIEIRYEDENIWLTQKMMAAL YDVSVATINEHLKKIYADSELQEEATIRKFLIVQKEGSRNVSRETKHYNLQAIIAVGFKV NNERAVQFRKWANQIVKDFTIKGWAMDDERLKNSGTKLTKDYFEKLLVKIREIRLSERRF YQKITDIYATSLDYDPSAKATKRFFAAIQNKLHYAIHGKTAAELIVDRANHKTKNMGLTT WEGSPDSKIHKYDVVVAKNYLNEEELNQMQRIVSSYLDMAELQAERHIPMTMEDWEKRLN GFLQLWDKEILNDAGKVSAALAKKHAESEFEKYRIIQDRLYKSDFDKFLELEDDTKKLEE >gi|325479967|gb|AEXN01000050.1| GENE 23 23998 - 25536 223 512 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 270 491 132 354 398 90 27 1e-17 SLVGKIMTQKLSQMAQTHAGYFMAAHKRIEIGEKIKRVPMGFFSSFSLGRLTTISTSSLS QAEMWVPMLLVLVLGGVLNTLVFVLGTLIFNVKVGLVAVAGVVVFFIVTSMMEKKSSANA DKMTETQTRLTKEVLATLQGMQVIKSYNLGGENNRALRKSIKDTSNILLDLEISVAPYTV IQRIVMGITTVAMVYVSLKLNLSGELPLAETILMIMASFIIFEGLIGAGSNMAILRACEN AIDSVGFIDSMPDMREGSITEPIKNHDIVFKNVSFSYDDRPILKNVSAEIKENTMTAIVG PSGSGKTTFCNLIARFWDVNSGEILIGGKNIKDYKIENLMNSISMVFQDVYLFEDTIENN IKFGKQNASHEEVVQAAKKARCHEFIEALPEGYDTIIGEGGASLSGGEKQRISIARAMLK DADIIIFDEATANIDPENEDKLKEAIETLTKNKTVIMIAHRLKTIRNADQILVLKDGEIV ERGNHEKLIENNGLYSDLINAKAKAESWKLNN Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:25:40 2011 Seq name: gi|325479964|gb|AEXN01000051.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00055, whole genome shotgun sequence Length of sequence - 729 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 406 254 ## COG3547 Transposase and inactivated derivatives + Term 605 - 646 -0.9 Predicted protein(s) >gi|325479964|gb|AEXN01000051.1| GENE 1 2 - 406 254 134 aa, chain + ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 4 111 168 273 391 57 34.0 6e-09 SLFSNIYGVASKELLSKYPLHEDMISIPADELAKMLSKCSKGRFGIDKAKEIQEKASNSF GVKFALKSFSFQIKQIIAQISFLEDQIADIEDEISSMINSLCPVITSITGIGDVLALLFS QKSVMFHDLRELIS Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:25:41 2011 Seq name: gi|325479963|gb|AEXN01000052.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00020, whole genome shotgun sequence Length of sequence - 2546 bp Number of predicted genes - 2, with homology - 0 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 585 - 716 78 ## - Prom 769 - 828 5.2 2 2 Tu 1 . + CDS 1231 - 1296 101 ## + LSU_RRNA 1284 - 1776 91.0 # AP008971 [D:613574..616579] # 23S ribosomal RNA # Finegoldia magna ATCC 29328 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis; Finegoldia. + LSU_RRNA 1888 - 2435 91.0 # CP000817 [D:12129..15045] # 23S ribosomal RNA # Lysinibacillus sphaericus C3-41 # Bacteria; Firmicutes; Bacillales; Planococcaceae; Lysinibacillus. Predicted protein(s) >gi|325479963|gb|AEXN01000052.1| GENE 1 585 - 716 78 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSASEICISYIISSVIVFVKYFLVSFVNLIPLLIRSFGIELAS >gi|325479963|gb|AEXN01000052.1| GENE 2 1231 - 1296 101 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTPCCQEKSLSRPKRPYQLAS Prediction of potential genes in microbial genomes Time: Wed Jun 22 19:26:08 2011 Seq name: gi|325479897|gb|AEXN01000053.1| Anaerococcus hydrogenalis ACS-025-V-Sch4 contig00006, whole genome shotgun sequence Length of sequence - 65984 bp Number of predicted genes - 71, with homology - 70 Number of transcription units - 27, operones - 14 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 4 - 930 681 ## COG1530 Ribonucleases G and E 2 1 Op 2 . - CDS 927 - 1553 638 ## Apre_1314 hypothetical protein 3 1 Op 3 . - CDS 1555 - 4974 3780 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 4 1 Op 4 . - CDS 4986 - 5477 449 ## Apre_1316 hypothetical protein 5 1 Op 5 22/0.000 - CDS 5487 - 6317 864 ## COG1792 Cell shape-determining protein 6 1 Op 6 4/0.000 - CDS 6320 - 7333 1165 ## COG1077 Actin-like ATPase involved in cell morphogenesis 7 1 Op 7 . - CDS 7343 - 8023 606 ## COG2003 DNA repair proteins 8 1 Op 8 3/0.000 - CDS 8016 - 8534 459 ## COG4769 Predicted membrane protein 9 1 Op 9 . - CDS 8531 - 8914 398 ## COG5341 Uncharacterized protein conserved in bacteria - Prom 8938 - 8997 7.7 - Term 8962 - 8997 3.4 10 2 Op 1 12/0.000 - CDS 9004 - 9801 1006 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 11 2 Op 2 3/0.000 - CDS 9814 - 10389 802 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 12 2 Op 3 13/0.000 - CDS 10399 - 11064 777 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 13 2 Op 4 12/0.000 - CDS 11075 - 11614 785 ## COG4659 Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 14 2 Op 5 12/0.000 - CDS 11607 - 12545 1154 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 15 2 Op 6 . - CDS 12557 - 13873 1798 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 16 2 Op 7 1/0.000 - CDS 13938 - 14594 698 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 17 2 Op 8 4/0.000 - CDS 14597 - 15196 559 ## COG0237 Dephospho-CoA kinase 18 2 Op 9 . - CDS 15168 - 17504 2283 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 19 2 Op 10 . - CDS 17558 - 17809 300 ## COG0258 5'-3' exonuclease (including N-terminal domain of PolI) 20 2 Op 11 . - CDS 17873 - 19444 953 ## Apre_1331 hypothetical protein 21 2 Op 12 1/0.000 - CDS 19453 - 20517 683 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 20609 - 20668 13.0 - TRNA 20661 - 20747 70.3 # Leu CAA 0 0 - Term 20601 - 20633 1.5 22 3 Op 1 . - CDS 20800 - 21390 406 ## COG0671 Membrane-associated phospholipid phosphatase - Term 21434 - 21461 0.1 23 3 Op 2 . - CDS 21465 - 22715 1391 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 24 3 Op 3 5/0.000 - CDS 22784 - 24100 1259 ## COG0733 Na+-dependent transporters of the SNF family 25 3 Op 4 . - CDS 24119 - 25441 1114 ## COG0733 Na+-dependent transporters of the SNF family - Prom 25493 - 25552 6.5 26 4 Tu 1 . - CDS 25562 - 25918 370 ## Tcur_0021 thioesterase superfamily protein - Prom 25960 - 26019 9.8 + Prom 25903 - 25962 7.3 27 5 Op 1 . + CDS 26006 - 26203 247 ## gi|212695726|ref|ZP_03303854.1| hypothetical protein ANHYDRO_00247 + Prom 26205 - 26264 2.5 28 5 Op 2 . + CDS 26293 - 26937 634 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Term 26909 - 26963 9.1 29 6 Op 1 . - CDS 26971 - 27111 89 ## 30 6 Op 2 . - CDS 27150 - 28559 1341 ## FMG_1550 hypothetical protein - Prom 28756 - 28815 5.3 - Term 28968 - 29020 0.7 31 7 Tu 1 . - CDS 29087 - 32815 4329 ## FMG_1550 hypothetical protein - Prom 32856 - 32915 10.9 - Term 32964 - 33003 6.0 32 8 Op 1 . - CDS 33008 - 33964 1165 ## HMPREF9243_1274 diaminopimelate dehydrogenase (EC:1.4.1.16) 33 8 Op 2 . - CDS 33966 - 34385 549 ## COG0289 Dihydrodipicolinate reductase 34 9 Op 1 . - CDS 34489 - 34725 411 ## Rumal_2225 dihydrodipicolinate reductase (EC:1.3.1.26) 35 9 Op 2 1/0.000 - CDS 34726 - 35370 616 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 36 9 Op 3 3/0.000 - CDS 35406 - 35594 283 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 37 9 Op 4 . - CDS 35595 - 36575 1200 ## COG0136 Aspartate-semialdehyde dehydrogenase 38 9 Op 5 . - CDS 36575 - 36793 262 ## COG0019 Diaminopimelate decarboxylase 39 9 Op 6 . - CDS 36803 - 37543 678 ## COG0019 Diaminopimelate decarboxylase - Prom 37640 - 37699 4.6 40 10 Tu 1 . - CDS 37730 - 37885 197 ## gi|212696490|ref|ZP_03304618.1| hypothetical protein ANHYDRO_01028 - Prom 38131 - 38190 7.2 - Term 37972 - 38019 -0.1 41 11 Tu 1 . - CDS 38205 - 38816 632 ## COG2094 3-methyladenine DNA glycosylase - Prom 38900 - 38959 9.9 + Prom 38790 - 38849 11.9 42 12 Tu 1 . + CDS 38953 - 40305 1614 ## COG0527 Aspartokinases + Term 40510 - 40552 5.1 - Term 40498 - 40538 8.5 43 13 Tu 1 . - CDS 40671 - 41297 724 ## COG0546 Predicted phosphatases - Prom 41335 - 41394 5.2 - Term 41362 - 41393 3.1 44 14 Tu 1 . - CDS 41404 - 41853 526 ## COG0073 EMAP domain - Prom 41901 - 41960 4.6 - Term 41925 - 41976 -0.9 45 15 Op 1 . - CDS 42010 - 43245 912 ## COG0582 Integrase - Term 43260 - 43303 -0.7 46 15 Op 2 . - CDS 43323 - 43532 194 ## FMG_0933 putative transposon excisionase - Prom 43557 - 43616 6.7 - Term 43896 - 43952 10.2 47 16 Tu 1 . - CDS 43968 - 44378 485 ## FMG_0934 hypothetical protein - Prom 44534 - 44593 8.6 - Term 44530 - 44584 -0.3 48 17 Op 1 1/0.000 - CDS 44698 - 46047 1240 ## COG0534 Na+-driven multidrug efflux pump 49 17 Op 2 35/0.000 - CDS 46084 - 47817 214 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 50 17 Op 3 . - CDS 47814 - 49556 1191 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 51 17 Op 4 15/0.000 - CDS 49592 - 49963 370 ## COG1122 ABC-type cobalt transport system, ATPase component 52 17 Op 5 34/0.000 - CDS 49957 - 50982 704 ## COG1122 ABC-type cobalt transport system, ATPase component 53 17 Op 6 . - CDS 51013 - 51675 519 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 54 17 Op 7 . - CDS 51700 - 52281 486 ## FMG_0940 hypothetical protein 55 17 Op 8 . - CDS 52299 - 52892 669 ## FMG_0941 hypothetical protein - Prom 52936 - 52995 7.9 + Prom 52992 - 53051 7.9 56 18 Op 1 . + CDS 53221 - 53577 255 ## MGAS10750_Spy1711 hypothetical protein 57 18 Op 2 . + CDS 53579 - 54910 1064 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) + Term 54996 - 55062 17.3 - Term 54984 - 55048 9.9 58 19 Tu 1 . - CDS 55057 - 55578 396 ## COG4767 Glycopeptide antibiotics resistance protein - Prom 55615 - 55674 5.2 59 20 Op 1 . - CDS 55683 - 56009 250 ## Apre_1840 ABC transporter-like protein 60 20 Op 2 . - CDS 56040 - 57182 526 ## Apre_1839 hypothetical protein - Prom 57265 - 57324 4.6 - Term 57315 - 57378 9.4 61 21 Op 1 . - CDS 57438 - 57728 440 ## Apre_1837 radical SAM domain-containing protein 62 21 Op 2 . - CDS 57694 - 58968 998 ## Apre_1836 hypothetical protein 63 21 Op 3 . - CDS 58970 - 59857 747 ## COG1131 ABC-type multidrug transport system, ATPase component - Prom 60025 - 60084 10.3 64 22 Op 1 . - CDS 60200 - 61417 680 ## COG4974 Site-specific recombinase XerD 65 22 Op 2 . - CDS 61499 - 61702 357 ## SPH_1403 hypothetical protein - Prom 61740 - 61799 3.9 + Prom 61521 - 61580 8.7 66 23 Tu 1 . + CDS 61686 - 61937 185 ## SPH_1404 hypothetical protein - Term 62092 - 62120 -1.0 67 24 Op 1 . - CDS 62163 - 62393 243 ## SPH_1405 hypothetical protein 68 24 Op 2 . - CDS 62390 - 62812 424 ## SAG0919 Tn916 hypothetical protein - Prom 63035 - 63094 3.8 + Prom 63178 - 63237 7.9 69 25 Tu 1 . + CDS 63317 - 63670 352 ## SPH_1408 transcriptional regulator, putative + Term 63691 - 63754 11.1 - Term 63576 - 63616 -0.7 70 26 Tu 1 . - CDS 63730 - 63897 87 ## GALLO_1682 hypothetical protein - Prom 63948 - 64007 7.7 71 27 Tu 1 . - CDS 64016 - 65935 973 ## COG0480 Translation elongation factors (GTPases) Predicted protein(s) >gi|325479897|gb|AEXN01000053.1| GENE 1 4 - 930 681 308 aa, chain - ## HITS:1 COG:TM1606 KEGG:ns NR:ns ## COG: TM1606 COG1530 # Protein_GI_number: 15644354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Thermotoga maritima # 69 298 134 363 454 65 27.0 1e-10 MKSFIFVDYKEKSFGKIIDNKLYELKFYSPYLYNIYRAKVVGKIDSINAYFLLYDKDKKA FLKSNKKFKIGDSLIGQIVKEEFDDKLATFSANFRIENQDYFLYRFKNKGYPILKKGRKK NSKTYKDLLNIKNSLINEENFTPSPKLLKTYNEFDLYLEENKDYDCQEVDIRNNKIIYDC LKTIGDEKIYKGELSIIINKLETLCFVDVNSSKKRSTMDKDDFYYKVNEDLIDFIFYNLK LRNIGGMIVIDFLKSTLNEKLVEKINGCLKKYFKTYTIYGFTNMGLFEISIKREGESLIK KLKEKELI >gi|325479897|gb|AEXN01000053.1| GENE 2 927 - 1553 638 208 aa, chain - ## HITS:1 COG:no KEGG:Apre_1314 NR:ns ## KEGG: Apre_1314 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 208 1 207 207 98 37.0 2e-19 MKVFLINSKNHNEGKFIKELSDKLSKDKSLLLLSFQRQKDENIEDLFDMGGMITYDICDY FLDIVGLDKIIKKYKENLDFAISPLVQEKYDIKKEDIDKLLKEVSKYDYLIIYGLDSKLL DEKKEIQILNEEELEKEINSDYFCIESDDKYFDIREKRDLILGKSSKFIGLKTKNNSYDK IISNLLEDKKEEIDKIGFFEKLKKKLAQ >gi|325479897|gb|AEXN01000053.1| GENE 3 1555 - 4974 3780 1139 aa, chain - ## HITS:1 COG:CAC1246 KEGG:ns NR:ns ## COG: CAC1246 COG0768 # Protein_GI_number: 15894529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 482 1135 227 916 916 194 27.0 9e-49 MKKQKESRITLLQIVFALMFVAVFIKLFILMINQGDHYRDLSDNRKVQEVDEIASRGDIL DRNGNILATTVPSFAVQLYKDQLTNLDDKERIDAVTTLVNILEEAGVNYQNDFDIRLNSF QYKTTDDYFKEEKSPEDKIVDTIIDNNLIRELVESTSDKNGIKYETMKTALLALKKRGID IPLLVSQKDREIKLSYKDNAKSKLKSINHTINEDPIDVVVSEIGEDKSVIRNILENNQAR ILAYNILKDKNLESNVILKDYTLAADEKFIQKKASLHHGYPEIKLNTKASDDFYNIVKKT SIKEFLKSASLNEDDGSYKIPADVLIEKLENKGVYANFTTEVKTETKDDKNIYSVDLNFK NSQAGDPAEELANLADKHHLLKDVVLDKDFKYLAQNANVKNSVYPSIDISDDKIEKWDYT FNVGKKDFFEHYASLDKNQSRDKAIKKLSKAKDAKEILDYIKKVSNIKNNNKYEACGILT IDNIINRQGSYGFRPINLVYNLDESTVLRIEENIDKAKGINVATIPIRSYPNRNLASHVL GYMGPIATDDEVERYVNQDSYLRDEIVGKTGIEESYQDTLRGKNGKSIVTVDSSGNRIKT LSQNPSEPGNDVYLTIDANLQNQAEKSLAKILESIRTGKAYTSEYGDFTPEKSASYATSG AVVVSNVKTGEVLAMASYPNYDPNLFSTGISETDWDSLQVPDNSSVIEARPMMNLASQTA VMPGSTFKLVTSLAALEKGLDPQRLNYCNGFMDIGNKRFSCLIWSTTGQTHGEENLYGAI RDSCNYYFYCLALGENPSTHKSLGVKLELNDIKKAAEILGLNKTTGIEINIPQETVGNIP STEKKLEVTKSMMKKYLEKDLANYIKGNTKKSKKDIENDISKLIKLADNPKAVDRVRLAE IVDGMGYEPFKIKNGDTAGLVDTLKYTFLNQAKWDITDMLNIVIGQGQNSYTPLQMNRVI STISNGGYLNKYTLINQVKDHNSKNTLFKNQVKNKKINIKNFRYLEDIKHGTLLVAQNNA ILNKMPLEVGVKTGTAEVEGKNPDGSDYEPYAWMVGVAPYDDPEIAISIILTQGIISSNV SPVFRDIVCKYFDIKINPEDQSIVVDKKDDNKDENTNKQDQNNIGNQDNIENNENTNGE >gi|325479897|gb|AEXN01000053.1| GENE 4 4986 - 5477 449 163 aa, chain - ## HITS:1 COG:no KEGG:Apre_1316 NR:ns ## KEGG: Apre_1316 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 163 1 161 161 120 49.0 2e-26 MNKLKTFIVSLISFILQITVFSKIDIFGANINIIIGLVISLSLILGSKSGAYAGLIIGLM EDLMFSKIIGIRALSYFLIGHIVGDERFRFNSDKNTGLILSFAFTIANFIFVSLITYLFK SDMIVIKNYLFLPLLVEAVLNTIIYLVYHFIVKKLMYIPTYRI >gi|325479897|gb|AEXN01000053.1| GENE 5 5487 - 6317 864 276 aa, chain - ## HITS:1 COG:CAC1243 KEGG:ns NR:ns ## COG: CAC1243 COG1792 # Protein_GI_number: 15894526 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Clostridium acetobutylicum # 14 274 12 273 283 77 28.0 3e-14 MSYRRKKKSNKSFIITIILLVLLIFVSSISDGLVKAGNNAVNTIFMPVNKISYSISSELI KAVEDTIGSKQTRSEIEKLKVENKNLLKENANLNEIINRKDFLKAEKKAMKDEKYDYIKA QIISSDVKSMQESFFIDKGKKDGLKVNDVILQAIGDSEYSSAVIGKVVKVNATTSKVETI KNSSNDVSFINSRSGDYGVIDDFKNKTISGYMLEVSSDAKKSDILLTSGIGGVYPKGLYL GEISNVYMSKDSLRKNVNIDSPVDFTHLYRVLVLRR >gi|325479897|gb|AEXN01000053.1| GENE 6 6320 - 7333 1165 337 aa, chain - ## HITS:1 COG:CPn0850 KEGG:ns NR:ns ## COG: CPn0850 COG1077 # Protein_GI_number: 15618759 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Chlamydophila pneumoniae CWL029 # 3 333 29 360 366 249 38.0 5e-66 MKFRIKAEDLAIDLGTSSIKVFKKEDGVIINEPSVLVLDHQNRQIKAIGQEAKDMIGKTP DEIIIQRPIEKGVISDFNLTEAMLNYYFQQINPGFSLLQARAVVCVPSGITDIEQRAVED AALHAGSRDVIMVDESLASCFGIGLSPEDPRGILVINLGAGNSEVCVVSLNGIVASKTLK IGGDDIDKNIQTFLKENKKIEIGLNTAEKIKKEILSLRIKDKNLSMDVEGRDLSDAKPKR IKLKSEEIAACLSEFADSLVEMIYLVLEKTPPELSSDIKNDGFILTGGMAKVKGLGEYIE KKINLKSKISENPELDAIKGAGLIMENPDRFLKYQSR >gi|325479897|gb|AEXN01000053.1| GENE 7 7343 - 8023 606 226 aa, chain - ## HITS:1 COG:MA1979 KEGG:ns NR:ns ## COG: MA1979 COG2003 # Protein_GI_number: 20090827 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Methanosarcina acetivorans str.C2A # 4 223 7 225 229 184 44.0 1e-46 MNKKIKDLDISQRPREKLKNEGFDCLSDEELLAILIGTGSKKKNAIELSREIFSKFSTDE LLSISIEELSTVDGIKLAKASKIVASIQLGKRLSEKMANKKIKQITSCDDVYNLMKNKFL DTKKEHFYAILLDTKNVIISKELISTGDLNSSIVNPRECFIAAVRKSANAIIFVHNHPSG NCNPSRNDKIITDRLVQAGKILDISVLDHIVIGNGKYFSFKKECLM >gi|325479897|gb|AEXN01000053.1| GENE 8 8016 - 8534 459 172 aa, chain - ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 10 170 8 169 180 94 34.0 1e-19 MNKKYLKIYVNLALFTALSLAISLIESMVPMPVPIPGARLGFSNIIILIAIYFYDYKKAL TVSILKSFLLVLITGSVMSFFYSIVGAIFSTSAMYFAIKKLDDDFSIIGVSEIGAFSHNL GQIIVAIFFMQNIKMFYYFPILVFIGIFTGFFVGLSTGFMIKHLEKIGVFNE >gi|325479897|gb|AEXN01000053.1| GENE 9 8531 - 8914 398 127 aa, chain - ## HITS:1 COG:L178600 KEGG:ns NR:ns ## COG: L178600 COG5341 # Protein_GI_number: 15673322 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 1 123 14 132 135 83 35.0 9e-17 MKVKRKDIIVVVLLLVLSILMAFFVQKFKSDQNGSYLRVELNGKEYGKYPLNKNKTFKIK VDNDEYNVVEIKNGKVKMREANCRDLICTHMPKISKVGETIVCLPHRLILEIVNDDTNDD EIDKVVK >gi|325479897|gb|AEXN01000053.1| GENE 10 9004 - 9801 1006 265 aa, chain - ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 1 229 1 230 264 167 41.0 2e-41 MNNILIPTLVLAVLGFVLASLLGVISKKFEVETDPIVERVREALPGANCGACGYPGCDGC ANAIAKGEAAVSACVIGGQSVTDAVASAMGVESAGAGEKKVAVVKCNGTCENAKDLYDYA GLEDCRAQIALFGGKKACNYGCVGCGSCVKACEFDAIHMVNGVSVVDKEKCVACGACVKI CPKNIIELVPYSQKAIVKCSSHDKGKDVRGNCKVGCIGCSICARTYPEGFAMDNFLSKEK ISDNLDIELLKQAAEKCPAKCIDVE >gi|325479897|gb|AEXN01000053.1| GENE 11 9814 - 10389 802 191 aa, chain - ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 19 190 21 192 194 181 58.0 1e-45 MSNLFSIIIASIFVNNYVLGQFLGICPTLGVTSKVETAKGMGAAVIFVVTLSSIITWVIQ YYILDPLKIGYLQTVVFILVIASLVQTVEMIMKKSMPNLYEALGVYLPLITTNCIVLGVA IKNINENYNLLETTINSAAAAVGFLIALVILASIREKIEDNDLPEAFKGGPITLITLGLM SIAFMGFAGLA >gi|325479897|gb|AEXN01000053.1| GENE 12 10399 - 11064 777 221 aa, chain - ## HITS:1 COG:HI1688 KEGG:ns NR:ns ## COG: HI1688 COG4660 # Protein_GI_number: 16273575 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Haemophilus influenzae # 27 218 30 235 235 177 45.0 2e-44 MERQTGKPIDVQKEKEKRKKKSPNLLKVFKDGIFSNNPVFVQMVGMCSVLAISSSLSNAI GMGAAVIFVLTLSNLVISILRNFIPDEVRIPAFIVVIASFVTMVQMLIKAYLPALDQSLG IFIPLIVVNCIILARAEGFASQQGPIASIVDGLGQGLGYTIAISILAAIRELFGNGTLLD NRIIPEDFTIGFLIQPASSFIILGIMFAVANAISNKKKNNK >gi|325479897|gb|AEXN01000053.1| GENE 13 11075 - 11614 785 179 aa, chain - ## HITS:1 COG:FN1594 KEGG:ns NR:ns ## COG: FN1594 COG4659 # Protein_GI_number: 19704915 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfG # Organism: Fusobacterium nucleatum # 2 168 3 164 177 71 33.0 7e-13 MNKALKLGIKLLIITAVSALVLAFTNSVTDPIIKKAEKEKLNESLKIAFPEGKSFEEVKG KFPDSVKGVYKADGDKGYVFDVNAKGGYGGDIEFIVGVDKENKLTGFSPLKHSESAGFGL QMEEDWFKKGVKGVSMDKKVGASETGSENEIVGISGATYSTNAILSGINTARDVLKELK >gi|325479897|gb|AEXN01000053.1| GENE 14 11607 - 12545 1154 312 aa, chain - ## HITS:1 COG:FN1595 KEGG:ns NR:ns ## COG: FN1595 COG4658 # Protein_GI_number: 19704916 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Fusobacterium nucleatum # 6 310 5 314 314 246 44.0 5e-65 MEAKKLLVSSSPHMRSERTVTKEMLDVIIALIPTGLVGVYFFGTKALALILASVISCVIA EFISNKVMKRDSSINDLSAVVTGLLLAYNIPVTMPIWQTVIGAVFAIVICKQFFGGIGQN IVNPALGARAFLLASWSKNMSNYVAPGKVSAVSAATVLSGGDKPALIDMFIGNMGGCIGE VSTLAILIGAAYLVFRKVISLRIPAVYIITTAVLLIIFNKSVDGILEQLLSGGLMLGAFF MATDYTTSPVTKKGEIIFAFGCGLITSLIRVYGGYPEGVSYSILLMNLLVPLIDSRTMPK VFGVANKGAKDE >gi|325479897|gb|AEXN01000053.1| GENE 15 12557 - 13873 1798 438 aa, chain - ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 6 434 18 444 451 345 43.0 7e-95 MALENLSFDNGVKIPEYKELSENKGLIVAKVPKTVTIPLTQHIGAPSKCLVKKNDEVKVG ELIGEAVGNFSCNIHSSVSGKVTSVIDIQTASGKNAKAVVIDTEGYDQEINYERKDVTNL TKEKIVEAMKENGLVGMGGAAFPAHIKYSPNKAVDTVIINGAECEPYVTCDDYILKTKPE IIVDALELLVKAVDAKKGIIAIEDNKQESIEKVRKAIADKNSPKLELATMVTKYPQGDEK RIINAVLHREVPSGGLPMDVGVIVSNVSSANAVYEAVYYGKPLIERYMTVTGHGIKNPSN FLVRLGTSFEDMIEEAGGMTEDAGKVINGGPMMGIAQPNINQPVEKASNCILVLNKEESK APVTNPCIRCAKCVNVCPVGLMPLLIHKFSLKEKFDKAQDLHILDCIECGSCSYICPSKR PLVEAIRFGKRQIRQAGK >gi|325479897|gb|AEXN01000053.1| GENE 16 13938 - 14594 698 218 aa, chain - ## HITS:1 COG:slr0534 KEGG:ns NR:ns ## COG: slr0534 COG0741 # Protein_GI_number: 16332023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Synechocystis # 40 187 689 836 847 94 36.0 2e-19 MKALKSIFKIIGLIIISVVMAIIISFSIVAYQTSRQKIAYQDEIKKYSEKYNMDPLLIAS IIKVESDYDNEAHSNQNAKGLMQLLDTSAKHSSELIGEEYYPDKLKDVDYNLNLGVGYFN YLYKYYNDIDLALAAYNGGIGNVDKWIQEKKIDKHDPDPTKIPVEETRQYVIKINSNYDL MKVFYEDGLPSEKELKNRKDLSIKNYKKFVKKILFDVL >gi|325479897|gb|AEXN01000053.1| GENE 17 14597 - 15196 559 199 aa, chain - ## HITS:1 COG:HP0831 KEGG:ns NR:ns ## COG: HP0831 COG0237 # Protein_GI_number: 15645450 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Helicobacter pylori 26695 # 8 198 4 195 196 105 35.0 8e-23 MEIACMNQNKIVITGTIASGKSSLSEILKNKGYEVIDSDKINSKLLEKDQINYREILSSG AFDEAFEDGIINKKTLGKIIFNDTKKRELINKITHKNIISYINKIIEKSNEKNIFIEIPL FFQMKEKFPCDYVWLVVANKDVQVQRLMQRDKIDEDFALKKINSQNFSEMKEKSDLIFDN STSLYDLEKKVEVALDNLE >gi|325479897|gb|AEXN01000053.1| GENE 18 15168 - 17504 2283 778 aa, chain - ## HITS:1 COG:BH3153_2 KEGG:ns NR:ns ## COG: BH3153_2 COG0749 # Protein_GI_number: 15615715 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Bacillus halodurans # 225 778 17 569 569 465 46.0 1e-130 MDIDGFEADDIVGTYSKIARDEGLETVIITGDKDYFQLVNDDVIVYLTRKGISQMEEITE EKIKEDYGLSPKQLIDVKGLMGDKSDNIPGVDGIGEKTALKYIKKYGSMEDLYENLDDIS GKKTKENLENSRQIAFLSKKIGTIVTNAPVDYEISDLRVKDPDMESLKEKFSKYNFNKFL EKFEDGSDVQREELDFSYSFTDDDFSVIDDIEKDKIFYFKTIFENDNYIHSKAFKIAIKS PSSKTFIYNPDQKFVDNFKKYFEDENINKVSFDIKEDIVLFNKLGIEINFPYDDIMLMHY LIDPSRSSYDLKTFSQAFLKYEVLNEEDLLGKGRNKKSYKDLSEKELGKYLSSIINAIED SLDILTDKLKELSMYELYKDCEIKLSKVLADMEITGFVCDKNELEKIKDEVSVELEGLEK IIYELAGSEFNINSPKQLSIILFEDLELPIIKKTKTGYSTDAKVLEKLRDKHPIIGKIER YREMYKLKSTYLESLEECIDGDGRIRSTFKQNVTATGRLSSTEPNLQNLPIRTEEGRKIR KAFKADNEKILIDADYSQIELRVLAHLANDKKMQEAFSHDIDIHTKTASEVFNTPIDEVT KLQRSEAKAVNFGIIYGISDYGLSQNLNIPRKRAKEYIENYLNTYPQIKKYMKDIVKKAK EEGFVNTIFNRRRYVPEINSKNFNVRSFGERVALNTPIQGSAADIIKFAMINSYENLKKA KVDAKIVLQIHDEIIIEASKKDLQKAKEILKSSMEEAVNLKVPLLVDIDSGDSMYESK >gi|325479897|gb|AEXN01000053.1| GENE 19 17558 - 17809 300 83 aa, chain - ## HITS:1 COG:CAC1098_1 KEGG:ns NR:ns ## COG: CAC1098_1 COG0258 # Protein_GI_number: 15894383 # Func_class: L Replication, recombination and repair # Function: 5'-3' exonuclease (including N-terminal domain of PolI) # Organism: Clostridium acetobutylicum # 3 61 2 60 340 77 54.0 5e-15 MSKKVMLIDGSSLIFRAFFALPNLTNADGVMTNGVYGFLTMYFRAVEEYKPDYILVAFDK KQKLLGTRNLKIIRQIGIRLQAS >gi|325479897|gb|AEXN01000053.1| GENE 20 17873 - 19444 953 523 aa, chain - ## HITS:1 COG:no KEGG:Apre_1331 NR:ns ## KEGG: Apre_1331 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 520 1 522 523 325 42.0 3e-87 MRNIFAILFLLSSFLGYSCQVKDKFEVKVGFIPFILFTSYIFLIAIAARLSLMLVTTIIV NLIGLILFVKFLYNNKEILGRLFPEYFLFFISIGILSFYLYGRKFLMYDDFSHWATISRL LLRKDAINTGLDTTISFKSYPQAMAYFIYGIGRFFQFDESILMIINSIFTLSGLFCFISL TKNKVINYILTVLVIIYGFYYNIRPYCLLVDTILSTTGFAIFSFVYYYDFRKENNYLKYF LMPMFVSLVYVKNSGLFLSIFILIYIIKKYMRKDYKIIIISLGSIFLSNLSWSNHIKNEF SYTGKHSMSISQYKSGIATNHDLINGFTREFLSRVFNDYLMWALISILIILLIYKKFDKL IISLLFSIVCIYVIYQIGNYFMFISSMTPGELRRLACYDRYVRTIHMFLTLIVIYVLNFN YDDYLTKILSFLILIFSIFIMPKSEEIGFNNNEFRYQLEEEKNKNKIPREKKILIKFKEK DFSRIYTRASMYVFESNEITDTFPGDEKQFNKNDYDYFIDLSK >gi|325479897|gb|AEXN01000053.1| GENE 21 19453 - 20517 683 354 aa, chain - ## HITS:1 COG:FN1094 KEGG:ns NR:ns ## COG: FN1094 COG0463 # Protein_GI_number: 19704429 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Fusobacterium nucleatum # 1 353 1 357 360 306 50.0 4e-83 MKDIIVLIPALNPPRYILTNYIKELREKGFERIILVNDGSRNEYKEYFDSLKNQGIDVFD HYKNFGKGRALKNSFNYILNNYSDFSYVITADSDGQHRAEDLFNIAKIASRSKENILYLG SRDFNEENVPFKSSFGNKLTSFIYKLMFKDKIRDTQTGLRAICKSHMEDFLDLDGERFEY EINMLINCSKTGKKIKEIPIETVYFDNNSETHFNPVKDSIKIYSVMFKTFFKFILSSLSS WLVDIGFFRLFTKTLINIVKSQSTIIWISTIGARIISGLFNYNVNKNIVFKDESDSKSVF YKYVILWLCQMILSAFLVDRLFLFLGFDSSLIKIFVDCLIFLLSYRIQDRYIFN >gi|325479897|gb|AEXN01000053.1| GENE 22 20800 - 21390 406 196 aa, chain - ## HITS:1 COG:CAC2438 KEGG:ns NR:ns ## COG: CAC2438 COG0671 # Protein_GI_number: 15895703 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Clostridium acetobutylicum # 3 164 4 164 180 83 35.0 2e-16 MNFITKIDISILNFIQGLKSPLMDKMMTTITALGNMGIFWVLLILIFLTTKEYKKMAKLM VLCLIVNTIIVNLILKPAVGRTRPFELVDGIKLLVLKPQDPSFPSGHSAISFCMLTVILF FSKSKTIKIMSTILAILIAFSRLYLYVHFPSDVICGIIIGILSALGTLKFVYSDKGKKLI KSLREIYVDFKRLRKM >gi|325479897|gb|AEXN01000053.1| GENE 23 21465 - 22715 1391 416 aa, chain - ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 67 414 78 429 430 201 34.0 3e-51 MKKYRKILSLLLVFLMAFSLSSCKKQDGKSNISSDISVSNKEVKKENDKNKGIVKIDKKR PKKFDEKSKDEIINIKAGGDLMAHMGQVDYARNYGNGKYDFSNQFEYVKDFLSDSDLTIG NFETSVSKTREPSGYPQFTTPKEYIRDIKNAGFDMLSTANNNSVDSFEEGIFDTIDAMDE YKVAHTGTRKPGEDRFIYRNVKGLKVAFMSYTYGVNGLDSLVTENKPEDVINYLEPEKIK ADIKEAKKNKADLIIVYPHWGVEYQSYPTDEQIKLGRDMIDWGADLVIGNHPHVTQPAER YKTKDGKEGYIAYSCGNFIACQSYDVLGDIRTEQSVLYDINILRNNKTGKVKLGDVKIHP IWNGNMRDENGYLAKDFMTEDFLDVGKYYDKVNENQRERIRKCDEMIRKTVNTKVE >gi|325479897|gb|AEXN01000053.1| GENE 24 22784 - 24100 1259 438 aa, chain - ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 1 418 1 418 438 361 45.0 2e-99 MENNSKFTNKWGFIMACVGSAVGLANVWAFPYKIGMNGGLSFLLPYLFFVFLFGRVGLSA ESAVGRKYKSGPMGVFREVWKSRNKEGVGRVLRWIPLVGVVLLAIGYTVVITYVLKALID SITGTLLTQDPNLWFESISSKDFVLAKEHFLLIIIVFFTLAYGTKGIEKTNSFMMPLFFI LFIILAIRIAFLNKAVEGYKFIFTMDPRKLLDIRLWIAAMGQAFFSLSIVSTVMVVYGSY LPDSEDIVHSSTITSALDTTAAMLSTFVMLPATFAFGFSQSEGPKLIFVVLPKVLQEIAG GRIFAIILYIAIVFAGVLSVQSMIETVAEAITSKFEKLNRLYVLIALMTIVFVCGLFLHP IAKWGTWMNLVTIYILPISAIMGAISWFWVMKKEDLLEEINKNAKHKHGDGWYNLGRYFY VPLAVILCIIAIRYQISF >gi|325479897|gb|AEXN01000053.1| GENE 25 24119 - 25441 1114 440 aa, chain - ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 2 420 3 418 438 395 50.0 1e-109 MNKEKKFSSRLGFILTAVGSAVGMANVWGFPYKFQEGGMFFLLFYLVFVSLFAYVGLSSE FAIGRRAETGTLGSYEYALNSKNNNKIHSFFSKNIGILPLIGSLFIAIGYAVIVSYVLKA LVDSITGELMVVNTKTWFESFANKDYSVVFYHFIIILATLLTCLKGAHTIEKSNKIMMPS FFILFLIIAIFILTLPNAIDGYKYMFRFDYDKLSLNTVINAMGQAFFSLSVTGSGMIVCG SYLDKKEDILSAAKSTAIFDTLAALLSSCVIVPSILVFGLSQAGGPGLLFEVLPTILQNI RGGRIFAIILYTAVVFAGISSLQNMFEVIVESLMHRYKKIKRVYALLIIGLITFLVGMNM ETIGKWGPWMDLVSIYIIPIGASIGAITWFYFWKKEEHLEEVNIGAKKKVGEKWHKLGKY VYVPIAIGLSILALVFKVTF >gi|325479897|gb|AEXN01000053.1| GENE 26 25562 - 25918 370 118 aa, chain - ## HITS:1 COG:no KEGG:Tcur_0021 NR:ns ## KEGG: Tcur_0021 # Name: not_defined # Def: thioesterase superfamily protein # Organism: T.curvata # Pathway: not_defined # 6 116 37 151 168 62 33.0 5e-09 MNFVDFLEMEYVKGDDGSIITKIPIKDYCMNINGIIHGGVTMTLIDTACGKEASKYFDGE FVTSDGYVNFLRAGKDTEFLYAKCMAKKVGSRLINIDCDVFDDRRKVIAIGRFTFMKL >gi|325479897|gb|AEXN01000053.1| GENE 27 26006 - 26203 247 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695726|ref|ZP_03303854.1| ## NR: gi|212695726|ref|ZP_03303854.1| hypothetical protein ANHYDRO_00247 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_00247 [Anaerococcus hydrogenalis DSM 7454] # 1 64 1 64 314 102 96.0 7e-21 MRKILFILSSKAGKTEFDIKKHDIEKIYNKKDLEENVEIIHTSYKDHGKIAAKNFIYKYK NLKKQ >gi|325479897|gb|AEXN01000053.1| GENE 28 26293 - 26937 634 214 aa, chain + ## HITS:1 COG:BH1953 KEGG:ns NR:ns ## COG: BH1953 COG1597 # Protein_GI_number: 15614516 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 2 203 88 293 295 61 25.0 1e-09 MGTGNDFSKNFSYKNFKVENLLNLKDRKIDLIKVNNKIGINVLSLGFDTLVLEKAYEFLN KNPHLGKKAYLLGVIKALKHLSYKDLSFKIYDKDNKAIEFEDKFLLSAICNGGYYGSGFN PAPSAKIDDGLLNLVYAKKLPNLLLPSLIIRYKFGLLEKSKYLDEIKIKKGQIRSSEKIL ANIDGEIFESKKINFQILENSLTWTYFDKTQKKC >gi|325479897|gb|AEXN01000053.1| GENE 29 26971 - 27111 89 46 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEKTKTVINKDNTNKNPSTGVASLSTVLSSLGISLSALGFSKKKEK >gi|325479897|gb|AEXN01000053.1| GENE 30 27150 - 28559 1341 469 aa, chain - ## HITS:1 COG:no KEGG:FMG_1550 NR:ns ## KEGG: FMG_1550 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 8 369 1307 1683 1837 378 77.0 1e-103 MGSDDFTGTFETKKTKAVEFETEYIVDETLEPGKTVVDKEGKLGEEEITVTHTIVNGKVT KSEESKPVQTKAPEKRIVRVGKKPSEGETTKTIEREIPYETKVIYDENLEAGFQKIENEG KAGKEEVTITQKIKDSKPVGEATETTKTITEKEDRVVRIGVKPVVKETELGNNTEYRHNP ELKAGGEKVIEEGSKGSVKYTTTFNKETGKLEVKEERREPKNKVVEYGSKTDGEFTYESE KAYDIIIRENPNLEAGKTKVIQEGKPGKTETTVKIENSEEVSRDTKTITEKQDKIIEIGT KNVCEIPPVKPEDPTKPDEKDPEDPNKPGEKDPEDPNKPGEENPKDPEKPGEEDPKDPEK PGEEDPKDPENQVKKIRKIQEIQAKKNQKNQAHQVKHQKSQVNQINQETQVKKIQKIQEI QAKKNQKNQAQQAKHLKNQMNQAHQVKHQKNQINLDKDLKILKNLKIKM >gi|325479897|gb|AEXN01000053.1| GENE 31 29087 - 32815 4329 1242 aa, chain - ## HITS:1 COG:no KEGG:FMG_1550 NR:ns ## KEGG: FMG_1550 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 71 1242 107 1273 1837 1652 88.0 0 MNKKKDIIALALSVSFVMGGASIAQADEINPDNPSYISENQQREDEPSVQNLGNDDKNIT EVNNNSDTKDNEDLLLSEEKTPEAQGAGESGSQAQEDKNLQKADDPNYGEDEGKIKDYDG SERYKQTDLQPGDPNQTQYKTDEKKVKDGFKFEFKNPSSTSPSKTEYGYQITIDKKTGQR TYTSITVTDGGKVPVPTGEKPMMGQGEKLTPESPDVTYQPTENSTMDSAGPQRNLNYEAS EETLKHINNKENSSTSFGMKDNYTQDNPGVKFFAGNFALGYKVNPWPNENDKLELLKLNG SYNKKVFVQGQDIDTGIKVDNIDENAKERLVGQVYNPITGDIVPGASAYIGDNGNIHIKM PEGALKKDESGKTIINEDSIFNTPDYKALQNLDVKFFARPRTAEEFKKIAETPDEFGYTG TYTGSEAGTSDINHKGTNVTIDKQGIDRYDHYNLIGGFKLNLDDTRYYDQSFEDGNGKDT SKVTSSEVKPGEPFKVGMVKPEKPKETDKSAAEMNAAEGRGEASGRLIMDFINKENKGKA PEDQWKVELGKGDIANFTITPPKSAKAGDFVAIPIEYTYTNGSKDVHWFHFVVQESTYIK PEYDAQVNFPVNEQTSEAKVTEDGKRLTPEHYTLPDTLETDEAGNKLATDDKGNKWTVKV DEKTGKVSAKPVDPTAFDGGEKLTVPVVAHYVDEQKPGEDITEESYAYFVIEERANMTAR YNAKAGKSGDKLSSDVILNTEDHYNRRPGKFTIDSPTYTDDKGNVWNVSIDEKTGKITAT VPNAEEGRTVDGALLNVPVTAHYYEEDGKLEVGTKKTEAQFMAYGTNGKVEKTEEIPFET KVEKDPNLKKGEIKVITEGKKGSKKVTYTIEDSKIIKEEEQELEKPQERLIHVGEGVNDG THKIEEKVEVGFETEIQFDDSLAPGETKEIQKGETGEKKRDITLTIEDGNVTKTETGEFT ETKAPKKRIIKVGRNTEGKVEHKEELPFKYKVEEVDTLKKGEYKIVKPGKVGTKTTTWTI KNSKVDGEPTVTEVAAEDALIQVGKGTNEGTHEIVEKKNIDYKTVIEYDENLDAGQQEVV KEGNPGEQERTNTLVIKDGKVSETKEGEFKTTKEATDRVVKVGTKPVTKVVEKPFNTEYV YDENLESGKTEEVTPGKNGKVTITTTYDKDQKKVVTSETEEEGQNRVVKIGGKTNGTEKI KEEIPFEVEVRKDPSLKKGEWKYATDDEGNELKGEKGEQEKT >gi|325479897|gb|AEXN01000053.1| GENE 32 33008 - 33964 1165 318 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1274 NR:ns ## KEGG: HMPREF9243_1274 # Name: not_defined # Def: diaminopimelate dehydrogenase (EC:1.4.1.16) # Organism: A.urinae # Pathway: Lysine biosynthesis [PATH:aur00300] # 1 313 1 318 323 345 51.0 1e-93 MIRIGIVGYGNLGKSCQKLVEKTEDMKLVGIFSRREIKKDGFYKIENIEKFKDDIDVLIL CGSSDKDIRVQAPLLIKNFNTVDSFDTHKNIPSYEEKMGKIAEENDKIAIISTGWDPGLF SIIRTYSEAILEEGKTYTFWGKGISQGHYAAVRNIEGIKDASQYTIPKEEFIKKIKNGEN SEFSPEAAHIREVFAVAEEGYDKKELEEKIKSIPNYFDKYHTIVHFISQEELNKNHKGMP HGGKVIRVGQSPNQNQSTIELSLSLENNPDFTAAVNIAYARAAYNLKKENKKGAFTVIDI APKYLLKETRQELIKKFI >gi|325479897|gb|AEXN01000053.1| GENE 33 33966 - 34385 549 139 aa, chain - ## HITS:1 COG:CAC2379 KEGG:ns NR:ns ## COG: CAC2379 COG0289 # Protein_GI_number: 15895645 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Clostridium acetobutylicum # 1 137 114 250 250 126 48.0 1e-29 MGVNVMVYVSKILANLLEGFDIEIIEAHHNKKKDSPSGTANMIFDAINQARGGNLEKIYG RSGFTENKDSNEVGIHALRAGTINGDHEIIFAGQDEVIKLSHHAQSKKIFALGSLKAAKY IIKEKKGIIDINDVLNIGE >gi|325479897|gb|AEXN01000053.1| GENE 34 34489 - 34725 411 78 aa, chain - ## HITS:1 COG:no KEGG:Rumal_2225 NR:ns ## KEGG: Rumal_2225 # Name: not_defined # Def: dihydrodipicolinate reductase (EC:1.3.1.26) # Organism: R.albus # Pathway: Lysine biosynthesis [PATH:ral00300]; Metabolic pathways [PATH:ral01100]; Biosynthesis of secondary metabolites [PATH:ral01110]; Microbial metabolism in diverse environments [PATH:ral01120] # 1 74 1 74 252 65 44.0 5e-10 MIKVLVSGASGAMGQVLIDLIRKNDDFKVSAGFSKDEILYEDFKIYDNLEKIQEKSDVII DFSSKDSLNPLLAYSTKK >gi|325479897|gb|AEXN01000053.1| GENE 35 34726 - 35370 616 214 aa, chain - ## HITS:1 COG:aq_1143 KEGG:ns NR:ns ## COG: aq_1143 COG0329 # Protein_GI_number: 15606400 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Aquifex aeolicus # 2 213 75 286 294 185 43.0 5e-47 MGTGSNNTYASGKFSEKISKIDGVDGLLVVTPYYNKATQEGLYEHFSYIAKKSTKPIILY SVPGRTNVNISIKTMKKLAQIENILGIKDATGDLSYTTSLRKELPKDFAIYSGNDDLITP LMSVGGNGVISVLANIYPKQVHELCQYALDGDFKKARDIQIKYFDITKALFNEVNPIGVK FAASYLKLCKNILRLPLTQAGKETEDLIKNLWRS >gi|325479897|gb|AEXN01000053.1| GENE 36 35406 - 35594 283 62 aa, chain - ## HITS:1 COG:VC2157 KEGG:ns NR:ns ## COG: VC2157 COG0329 # Protein_GI_number: 15642156 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Vibrio cholerae # 2 61 1 60 292 67 53.0 9e-12 MLFEGSGVAVITPFNDDKSVDYKSYENLLDFHLKNNTDAIIALGTTAETACLTEEEKLKL LI >gi|325479897|gb|AEXN01000053.1| GENE 37 35595 - 36575 1200 326 aa, chain - ## HITS:1 COG:aq_1866 KEGG:ns NR:ns ## COG: aq_1866 COG0136 # Protein_GI_number: 15606903 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Aquifex aeolicus # 6 325 5 336 340 319 51.0 4e-87 MENLNVAVVGATGLVGRKILEILEERNFPIKNLRAFASEKSAGKKLDFKNEKITVEKLDE NSFSDGDIDIAIFSAGGSVSEKYIPIAIENKVKCVDNSSFFRMDKNTPLVVPEINKNEIN KDTMLIANPNCSTIQSVLAIKPIFDNFSIKRIVYNTYQAVSGGGEKALEDLYNKTNKKWK YKIYNNVLPQIDDFTENGYTKEELKMINETRKILGDENLKITATTARVPVENSHAISINI ELDRDFDLDEIKNLIKNQEGVVLMDDIEKEIYPLPTKATGHDEVYVGRIRRDYSLDYGIN LWCVADNIRKGAATNAVENAEILLEV >gi|325479897|gb|AEXN01000053.1| GENE 38 36575 - 36793 262 72 aa, chain - ## HITS:1 COG:BS_lysA KEGG:ns NR:ns ## COG: BS_lysA COG0019 # Protein_GI_number: 16079395 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Bacillus subtilis # 1 70 367 436 439 75 48.0 2e-14 MIEKVKLAKVERDDLLLVLFAGAYTYSMSSNYNKLLKPAVVFVEDGKDYCAVKRQSLEDL IKRDLKYKKGDQ >gi|325479897|gb|AEXN01000053.1| GENE 39 36803 - 37543 678 246 aa, chain - ## HITS:1 COG:BS_lysA KEGG:ns NR:ns ## COG: BS_lysA COG0019 # Protein_GI_number: 16079395 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Bacillus subtilis # 4 246 120 362 439 167 37.0 1e-41 MIYAIDNYISLIIIDSEDEYYLLDKILKEKKKKTSCLLSINPDVKTDTHKFIQTSNADSK FGLNIRDENTEKIIEKIIENPNINLLGFHAHIGSQVKNLEFFKEEAKIMADFTKNIQDKF KKCFSHLNLGGGFGTRENLEDEDLDLEKFLKGLIVFMEDLFEKNKLSITNLSIEPGRSLI SKVGSILYRVGSTKVTMEGYPLIFVDGGMSDNIRPSLYGARYSAILANKLDNEKNQTYRV GGKLCE >gi|325479897|gb|AEXN01000053.1| GENE 40 37730 - 37885 197 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212696490|ref|ZP_03304618.1| ## NR: gi|212696490|ref|ZP_03304618.1| hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] hypothetical protein ANHYDRO_01028 [Anaerococcus hydrogenalis DSM 7454] # 1 51 1 51 436 92 98.0 1e-17 MLENNFKNNKGLLEIGGVSVEKLAQKYKTPLYIYDQKLIKDTASSFVENFK >gi|325479897|gb|AEXN01000053.1| GENE 41 38205 - 38816 632 203 aa, chain - ## HITS:1 COG:CAC2969 KEGG:ns NR:ns ## COG: CAC2969 COG2094 # Protein_GI_number: 15896222 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase # Organism: Clostridium acetobutylicum # 2 203 3 205 205 188 47.0 6e-48 MLEKNFYKKDTLSLAKDLLGKIMVRRVNDKIMKAKIVETEAYLGIKDRACHTFNNNKTER NKILYMDCGTLYVYQTYGIHFLLNISSVGENIPEGVLIRAVEPLSDLNIFSQNRFKKDYK DLSSYQKKNLTNGPAKLTKALLIDKSLNGKDIFGKNLYIEDADSSFEISVDRRVGIDYAK EARDLSYRFFIKNNPYISLNMQD >gi|325479897|gb|AEXN01000053.1| GENE 42 38953 - 40305 1614 450 aa, chain + ## HITS:1 COG:SA1163 KEGG:ns NR:ns ## COG: SA1163 COG0527 # Protein_GI_number: 15926908 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Staphylococcus aureus N315 # 3 446 5 445 460 350 45.0 3e-96 MCKFGGSSVANAEQIKKVCNIVLSDESIRAVTVSAPGKRFDEDIKVTDMLIDLYEKFRNK DPKYKDSLEAVIKRYQEIVNDLKLDEKILQDYRDILNSYLENIEDSFYLENAIKACGEDF NARLIAKYIKSLGINCAYLSPKDAGILVEHTLSEPVILEKTYENLNKFKDRDELFIIPGF FAYTPQGKIITFQRGGSDITGSIIARGLDCDIYENYTDMSYIYTAHPKLIENPKEITNIT YKEMRELSYNGFEIFQEDAVAPLLSHNIKIHVKNTNDPNNGGTIIETKREDVGQNPIIGI SNVGDFIAFNITEYLMNKKIGYINKLLDIFEYQHIPVEHIPTGIDSLAILVRKKYISSEF QMQNILNTIKANFSFDEFEIIDDISAIAIVGEGLSQRVGNALYKISKVLYEEDIKLESII QGASKNSVFVFINKKYEKIAIEKLYKEFFQ >gi|325479897|gb|AEXN01000053.1| GENE 43 40671 - 41297 724 208 aa, chain - ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 1 191 1 196 216 116 35.0 3e-26 MIKNIIFDLDGTISKSADGILNSFEYALDKMGKAYDRDELFKYIGPPLRDSFVKELGEDL ADDGVEFYRSYYLKKGKYDASIYDGMKDVIKNLYDRGYKIYLATSKGKNSSLEVLESYGI LRYFSYVEGSTDILNTKKKVLENVIIGNKLKKDQSLMIGDRSYDIDAGFDLGIKTIAASY GYGKDEEYKNASFIADSPSDIETIIKNI >gi|325479897|gb|AEXN01000053.1| GENE 44 41404 - 41853 526 149 aa, chain - ## HITS:1 COG:TM1085_2 KEGG:ns NR:ns ## COG: TM1085_2 COG0073 # Protein_GI_number: 15643843 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Thermotoga maritima # 37 148 2 108 109 82 41.0 3e-16 MKPIGEEKKAIEKNQHSIEEAAEEIDFTNVVVEDLFEDQVDFETFSKSDFRAVKVLDCKE VPKSKKLLEFTLDDGSGKNRTILSGIKAYYSPEELVGKTLLAITNLPPRKMMGIDSCGMI LSAIHEKDVEEKLNLIILKNNIPAGAKIY >gi|325479897|gb|AEXN01000053.1| GENE 45 42010 - 43245 912 411 aa, chain - ## HITS:1 COG:SPy2122 KEGG:ns NR:ns ## COG: SPy2122 COG0582 # Protein_GI_number: 15675872 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 13 407 1 378 381 94 26.0 3e-19 MVKRRKDSKGVVLKDGEYQRSNGTYEFKWQDKIGRRKSIYAKTLKELREKELDILRNTID GINNEGSSLSVNDTFKLWTKVKRGLKDNTFKNYIYMYQQFVEPTFGRIKLSDIKRSDVRS FYNRLKEDQGLMVSTIDCVHTVLHQVLELAVDDEYIRFNPSDNALKELKVAYRNESLKKK AMTIEEQVLFEEYLSNSDEYKKWYPIFIVMLWTGMRVGEVTGLQWDDLDFDNGLINVNRT LVYYSKGKGLNNRYAINTPKTVSGKRSIPMVQKVKDAFLMERELQKTFGIECCDSIDGFK DFVFLNRFGKVHNNGTLNKALRRIVRDCNLSIMDKNKSSSNDILLVPHLSNHIFRHTFTT RLNEQNINTKAMQSILGHSDISTTMDIYVDATEDFKIEQMGEFEKAMKFIF >gi|325479897|gb|AEXN01000053.1| GENE 46 43323 - 43532 194 69 aa, chain - ## HITS:1 COG:no KEGG:FMG_0933 NR:ns ## KEGG: FMG_0933 # Name: not_defined # Def: putative transposon excisionase # Organism: F.magna # Pathway: not_defined # 1 69 21 89 89 117 98.0 1e-25 MINENIKGVRVCEKAFLTLKEASEYFNIGQDKVRQLTDENDCDFVLFNGSKRLIKKKLME EYLNRQFSI >gi|325479897|gb|AEXN01000053.1| GENE 47 43968 - 44378 485 136 aa, chain - ## HITS:1 COG:no KEGG:FMG_0934 NR:ns ## KEGG: FMG_0934 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 136 1 136 136 188 92.0 7e-47 MAKEYYLYVRGQKVKVSEDIYKVYWREKEHEKYLEQVDKKNHLLFFSSLNHDGNFEDNLE DKNVDVEKVVDTQMMIEALRNAMSKLNKDEREIIERLYFNDETLRAVSKTQNISHTALIK RRDKILEKLKKFIEEI >gi|325479897|gb|AEXN01000053.1| GENE 48 44698 - 46047 1240 449 aa, chain - ## HITS:1 COG:MA1121 KEGG:ns NR:ns ## COG: MA1121 COG0534 # Protein_GI_number: 20089987 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 7 448 11 457 475 203 31.0 5e-52 MGKQDMKTQLLTKSPKELLFKLAIPGIIGMIVIGLYPFMDGVFAGWLIGDYAMSAISVSM SLTIINGGISALIGVGSASILSRAIGKGDKETTDKIFGNFCYWVIFFSVIITILGLVFAP HFLDLVGAKGNIKELGVRYLRIVFFGSIFVNFAQAGNMTMRGEGALKQSMMIMGAGAILN IILDPIFMKLMGEYAIEGAAIATVISQIVQAILTFHYFSKKSAFVGIHKIQKYKAIYSEM FSIGSSAMMMQILFAVQQTFLFKQAFAYGGDDWGILMSATMRLYMFSFIPLWGMSQGLQP VIGANFGAKQYGRVKDTMKIFMYGATILAAASWIPSMFCSEKLLSLFSVRREIIEVGVVN FKMFYSTFILYGIMIMTLTFFQSIGDGKKAGMIVMLRQLVLFIPAILLFPKAFGASAVWW TEPIVDFSMIMLGLFLMLNGLRKMGKDKA >gi|325479897|gb|AEXN01000053.1| GENE 49 46084 - 47817 214 577 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 334 565 2 239 245 87 27 2e-16 MISALKKILDFSGDEKKNVYHSIWVSFLFAIFHMLQISAIYIIVKAIVEKDMSMTPAWIA LILLVISIVGRSVANYYSQLQQCHASYFMVANKRVAIGEMLKKIPMGFFNENNIGEIVGI STTVLEDVENTAAMVMVNTLSGFINTIIFTIMILAFEWRIGLIVTIGCLLYLLILSKMEN KSRNVLPKRQVASAKLVDTILEQIGGMAVIKSFNLTGKGDEKVRDAIENSRKINLDCEKL FTPYTILQNILLDLFSILIIGAGIFFYINGELSFLNTVMTIIISFLAFSQIKLAGSATTS LRVVSGSIEQTKKLEEFPQMDIDGKDIKPTTFDISFDNVEFSYSGKKILDDISVKIPQKQ MTAIVGPSGAGKTTFCNLIARFWDVEKGEISIGKHNIKEYSLESLMRQISMVFQNVYLFQ DTIENNIKFAKPDATHEEVIEAAKKACCHEFIMKLPEQYETVIGEGGASLSGGERQRISI ARAMIKNAPIIIFDEATANVDPENEDKLQIAMEELTRDKTVIMIAHRLKTIKNANQILVL ANGKITQQGTHEELIQVDGIYKKFVEARQVAAKWQLS >gi|325479897|gb|AEXN01000053.1| GENE 50 47814 - 49556 1191 580 aa, chain - ## HITS:1 COG:SA2217 KEGG:ns NR:ns ## COG: SA2217 COG1132 # Protein_GI_number: 15928007 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 9 576 10 579 587 446 41.0 1e-125 MKEKSPAVILWELAYKEHSKLKTSVFIASIGVIAGIVPYIAASRILVYLLNGIADFKVYF LWMGIGLLSYILKSVLYSTALSVSHKATFSVLKDIRLRMIDKLPKMPLGEIISVPSGNFK QIIVDQVESMEKPLAHLLPEMTSNLLGSLSIFIYLLFLDWRMALLSLVSIPVGMLFMGLV MKNYAVQYEGSVKVNREMNSAIIEYVNGIEVIKTFNQDKRSYAKYKDKVIANARYFYEWM KSCQLPVSLSKNISPTTMITVLPFGWYFYISGSLSAEVFISVIILSLGIAGPLLETINFV DGLAKVGTIANSINLILEGKEQKHSDREVTIQQYNIDLQNVKFGYEEEKEILHGISLNIK EGTTVAFVGPSGSGKSTLAKLIAGYWDSMEGNINIGGHNLKEIPLKQLYSLTAFVSQDNF LFNESIRENIRMGNPSASDKEVEDIAKKSGCHDFIMKMEHGYDTVVGSSGSHVSGGERQR ISIARAMLKDAPIVILDEATSYIDPENEVIIKQALSKLIKDKTVIIIAHRLSTITDAEQI FLIENGELVSHGKHEELMEDSELYQKMWNAHTGVKDGEIK >gi|325479897|gb|AEXN01000053.1| GENE 51 49592 - 49963 370 123 aa, chain - ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 122 342 463 464 101 43.0 3e-22 MVMQDPSSQLFTESVLSEVSTVSEDKSLNEKMLEKMGLLSKLEKHPQSLSGGEKQRLLIA IARLSNKPIIILDEPTSGLCKPQMNTLINFLHDIEREGKLIIIITHDFEFIKHCDGTIYE FLK >gi|325479897|gb|AEXN01000053.1| GENE 52 49957 - 50982 704 341 aa, chain - ## HITS:1 COG:SP1438 KEGG:ns NR:ns ## COG: SP1438 COG1122 # Protein_GI_number: 15901290 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 1 335 1 324 374 164 35.0 2e-40 MLKIRKLDLSFDDENILKNLNFECKAGEITVITGHSGCGKSTLLKAINGVIPEYLDANIN GEIKYNSLDLLSKNIFERSCIISNVFQNPKSQFYCMNSTEELAFQLENRNTDKSEIINRI KKYSKLLNIEYLLDKNIFDLSGGEKQMIALAACAISENDIILLDEPSSSLDNESIERLKE ALVKLKELNKIIIVVEHRLFYLKDIMDRLCIIDNESLISYEKEDLNDYNLKAIAEGYGLR TFNKIEKSDLEINKYYKVNLLDDKNNFSNGDLSCHNFKKKYEKNKIFDFSISFNKGVNFI IGKNGIGKSTFIKLLTGTTKGHGDVFVNQKKLQNKIKKFLW >gi|325479897|gb|AEXN01000053.1| GENE 53 51013 - 51675 519 220 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 58 213 56 210 226 69 35.0 4e-12 MIRIDFRAKLFLMMVISFIMTIGNIQSLNPIYYVLICMLPTFLLFLSGHIKSGIKSIILF IILNIIEINIRELNDSIILSLIHIVIIIIKRVFAPMVMGNYIILTTSVGEAICSLKKVKC PDQIAIPVAVMVRYFYATRIEYRQIKQAIYLRGISFRKFLKNPILLIEYRIIPLLMTLSN SADELTVASLTKGLAVNQNRSNIREAKLTFADYLIFLFLF >gi|325479897|gb|AEXN01000053.1| GENE 54 51700 - 52281 486 193 aa, chain - ## HITS:1 COG:no KEGG:FMG_0940 NR:ns ## KEGG: FMG_0940 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 193 1 193 193 338 100.0 1e-91 MNKKLEVRDLINVGLFAVLGFIFMLIGSFTAMVPVLMPIVPLVQGILVGPSNMLFSTKIK KPGMLFIQTMLISLAYVIMGHGPWALLTGAIAGFIGEIILKSGSYDSKGKSRLAFSFSSL CTLGNYVPIIISRNEYAQGLLNQGYKQEFIDTMMKVMPDWILIVMAILGFIGAFVGCSLG IVFLKKHFSKIGK >gi|325479897|gb|AEXN01000053.1| GENE 55 52299 - 52892 669 197 aa, chain - ## HITS:1 COG:no KEGG:FMG_0941 NR:ns ## KEGG: FMG_0941 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 197 1 197 197 334 98.0 2e-90 MKDKETKVGQIRKKEIRDAAMRSFLNKGFQNTTMEDVIKEVGMSTGGVYHHYKSTAEMLK DLMLDGNQYRNNLIDNYLEAHIGQDKYEQMSEILVDKCLPDTDITKVYSLLLQSKKYNED LEKMFQDLKTETVNQLDSISNKLGIDSKIFEDGFLVNYINGMILSSQVLNARDSYDENRK YLKDTILNYILDLEKNR >gi|325479897|gb|AEXN01000053.1| GENE 56 53221 - 53577 255 118 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 118 35 152 152 194 95.0 1e-48 MDNRKRNNQLKIYLTDEEKEVFEKKMKLANFKTMSHFLRKCVLEKEIYVVDLEPFRNLQW LLSNATNNINQIAKATNTTGVIYKNEIESMKKQIEKLSREIWQIHSLVLNKSKESSGD >gi|325479897|gb|AEXN01000053.1| GENE 57 53579 - 54910 1064 443 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 1 244 1 258 402 62 29.0 1e-09 MAITKIHPIKSTLNLAIDYITKSEKTDEKILVSSFKCHPSTAHIQFIKTREDNDTKGTVL ARHLIQSFLPGEVDPIKAHEIGMELCKKVLKEDYEFVLATHIDRGHIHNHIIFNNVNYKT GKCYQSNKKTYHKIRFQSDELCKENKLSVIDKYYEAYKRKYKTSGKSWYEYDQNKIGNSW KSKLQFEIDRMINKSKSWEEFLENMESLDYEIKFGKHIAFRHEDKQRFTRSKTIGEDYTE EKIKERIDLAIKNKANPIKKRVGNVIDISTNEKAQSSKGYEIWARKHNIKTMADSIIKLR EQGINSITQLDDLIKKSADDRQDLLDKIKKIETEMKSLYQDMENINTINKYREIYKYHKK NPDDKQFAEEYYSELSVYKIAAKEILENYKKLPNTKEILSSLDKLQEKKNNLMQEYSLNK EQFYDLVQYRKNYENYYGKEVER >gi|325479897|gb|AEXN01000053.1| GENE 58 55057 - 55578 396 173 aa, chain - ## HITS:1 COG:SP0049 KEGG:ns NR:ns ## COG: SP0049 COG4767 # Protein_GI_number: 15899994 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Streptococcus pneumoniae TIGR4 # 19 142 15 141 169 60 37.0 2e-09 MKLKNQYISVGMKVLTVYYIIWLIFIVVFKMTFSINNLLIERQINLLPFYYDNTVNIKVI FDEMVSNILIFLPLGIMIRSILFRKNNLKSILFVFFFSLAIEFLQYALSIGVFDITDIIN NTLGGVLGVGIYNLALKKFKSKFKVDKFIFWIAFISAIFISLVLIVFLKYNGI >gi|325479897|gb|AEXN01000053.1| GENE 59 55683 - 56009 250 108 aa, chain - ## HITS:1 COG:no KEGG:Apre_1840 NR:ns ## KEGG: Apre_1840 # Name: not_defined # Def: ABC transporter-like protein # Organism: A.prevotii # Pathway: not_defined # 1 108 1 108 591 134 85.0 1e-30 MGKDKINHLECIKIAFKMIYEVDKNSFAITIILSIVSGVFPFLVLKLGQTIINIIQIHST RFDNIIILILIYLSLQFISVIVDNIKNYYLQRLSNEVTYSSMRKVMGK >gi|325479897|gb|AEXN01000053.1| GENE 60 56040 - 57182 526 380 aa, chain - ## HITS:1 COG:no KEGG:Apre_1839 NR:ns ## KEGG: Apre_1839 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 380 30 409 409 622 96.0 1e-176 MISFITYRSVQYDDISSGDTITYFGKEAIDHFNEDNKASEGYLTEEKITKVVKSYKEILN NENVNSRENLSEDAKKNISKFDPILRVITYPYTITTSGSLLDVNELDTEKDLNFYQSCYD ALERDIKQKYDNDKITEFALEKYKEVNKPFYYGGYFSEDILFFVNIFITVLSLICILISS QCIVEDKENYLDSIFRTTRNGRNKYICSKILALASIISLYLILNISIYYGTIKYLYTNGL DSSFQMLLFNQLSISNLTIGKVILSVFLLSILFTIASSMMSIFVAINSKVSMVSSAISSV LFFIPSLLYGKKLFKSIFYFLPSMGLGTAENSLIEQYQKFEFVKLPGKILWIPKFLVIMA LINIALYLLLSIKSYNKIEQ >gi|325479897|gb|AEXN01000053.1| GENE 61 57438 - 57728 440 96 aa, chain - ## HITS:1 COG:no KEGG:Apre_1837 NR:ns ## KEGG: Apre_1837 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 94 265 358 518 163 86.0 2e-39 MDLITLEAEKYNNKENITLNMVIEGPDYEDKYDKIQVYLNECDWLPKNINILTSSIDYGP HESIYTRPQSYEERMILKDYYDPILSWDEKNKIRRI >gi|325479897|gb|AEXN01000053.1| GENE 62 57694 - 58968 998 424 aa, chain - ## HITS:1 COG:no KEGG:Apre_1836 NR:ns ## KEGG: Apre_1836 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 424 1 424 426 664 90.0 0 MKIYLNEIKRILSIRSNQIIILFSLLLAILLSIAPINFTKITYGEGDKVKNLKGKEAIEY IKKAKEPYSGKITEDLIYNGTKKYREILREYNVTDRSELKPEINTKELMPIEHISKKVNE VFTDSQSNNLPPVLSIDINDTKYFYNKVFDYLNRVIENEYPNKAQNQIIEKSEKALSKIK TPYEYYGYYSTDANDYRGFYNTIIIILMVVVAATIFSSDSENDLDYIFKTTKYGRRKFAI YKILAILTISVLTLLLGNFIQGSILDYAFGTEYKKTSVQMMFSALSLHNWNFGQFNKYML ICNSIILISTILATLIISVLSKRKVESIMKSILLAVFPTIISPIGMISAINYIFPSSGVG LLNSLQNQIADFNFVNVFGNWMSSSSLIMISAVIYIIILPSLVVMMYSKIGGNYGLNNPR SRKI >gi|325479897|gb|AEXN01000053.1| GENE 63 58970 - 59857 747 295 aa, chain - ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 17 291 17 290 294 183 35.0 3e-46 MELEIKNVSKKFKDKLAVDNASATLCPGVWGLLGANGAGKTTLIKMITGISIPSQGEILY NGERINKLGEEYRNLLGFLPQEFICAPEFTVNSFLQYVAALKGIDKSKTEEMIDKLLEVL NLSDVKYKKVVKLSGGMRRRVGICQAILNDPKILILDEPTAGLDPGERIKLRNFITEISK NKIVLLSTHIVSDIEYISTSNLIMKDGKFVYSGTTDELISKIKNKVYEASISNREYAEKE TQLNVVNVKQQDDGNVLIRYISDKDDVLNNSKLTKAHLEDFYLWVFPEDRSFKVN >gi|325479897|gb|AEXN01000053.1| GENE 64 60200 - 61417 680 405 aa, chain - ## HITS:1 COG:BS_codV KEGG:ns NR:ns ## COG: BS_codV COG4974 # Protein_GI_number: 16078677 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Bacillus subtilis # 119 383 44 285 304 75 23.0 2e-13 MSEKRRDNKGRILKTGESQRKDGRYLYKYIDSFGEPQFVYSWKLVATDRVPAGKRDCISL REKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGV RSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLKAV LDDDTVPKTVLTEEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFE NRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGY SDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNDDKLPHITPHSLRHTFCTNYANAGMNP KALQYIMGHANIAMTLNYYAHATFDSAMSEMKRLNKEKQQERLVA >gi|325479897|gb|AEXN01000053.1| GENE 65 61499 - 61702 357 67 aa, chain - ## HITS:1 COG:no KEGG:SPH_1403 NR:ns ## KEGG: SPH_1403 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 67 1 67 67 111 100.0 7e-24 MKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQIKRKQFEKI IDTLDAI >gi|325479897|gb|AEXN01000053.1| GENE 66 61686 - 61937 185 83 aa, chain + ## HITS:1 COG:no KEGG:SPH_1404 NR:ns ## KEGG: SPH_1404 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 83 1 83 83 162 100.0 3e-39 MSVCFIKSSFPNHLFGFHKSCFTSNRTALAKLTGVPPLHGSHVAILIACDGFITLGLLTV WEYHYHDKNVVAGNPAKDCFSDH >gi|325479897|gb|AEXN01000053.1| GENE 67 62163 - 62393 243 76 aa, chain - ## HITS:1 COG:no KEGG:SPH_1405 NR:ns ## KEGG: SPH_1405 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 76 1 76 76 142 100.0 5e-33 MKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRG RMETRLITKILSFEIK >gi|325479897|gb|AEXN01000053.1| GENE 68 62390 - 62812 424 140 aa, chain - ## HITS:1 COG:no KEGG:SAG0919 NR:ns ## KEGG: SAG0919 # Name: not_defined # Def: Tn916 hypothetical protein # Organism: S.agalactiae # Pathway: not_defined # 1 140 18 157 157 251 100.0 8e-66 MKPSSFQTTIENQFDYICKRAMEDERKNYMLYLSRIAKREVSFSDVGDYLVSQFATTDNY STDFQIFTLNGLSVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTV YRHRTSGLALIKKFMEEFEE >gi|325479897|gb|AEXN01000053.1| GENE 69 63317 - 63670 352 117 aa, chain + ## HITS:1 COG:no KEGG:SPH_1408 NR:ns ## KEGG: SPH_1408 # Name: not_defined # Def: transcriptional regulator, putative # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 117 1 117 117 216 100.0 3e-55 MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDL VSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED >gi|325479897|gb|AEXN01000053.1| GENE 70 63730 - 63897 87 55 aa, chain - ## HITS:1 COG:no KEGG:GALLO_1682 NR:ns ## KEGG: GALLO_1682 # Name: not_defined # Def: hypothetical protein # Organism: S.gallolyticus # Pathway: not_defined # 1 55 8 62 62 94 98.0 1e-18 MCPVCGNKTRLKIREDTELKKFPLYCPKCRQENLIEIKQFKVTVITEPDAKTQSR >gi|325479897|gb|AEXN01000053.1| GENE 71 64016 - 65935 973 639 aa, chain - ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 2 638 3 647 652 427 37.0 1e-119 MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI TSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMG IPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWDTVIE GNDDLLEKYMSGKSLEALELEQEESIRFHNCSLFPVYHGSAKNNIGIDNLIEVITNKFYS STHRGPSELCGNVFKIEYTKKRQRLAYIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSING ELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREM LLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIY MERPLKNAEYTIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEG IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYL SFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGR SVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT