Prediction of potential genes in microbial genomes Time: Wed Jun 22 20:44:54 2011 Seq name: gi|229269867|gb|GG666044.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD1, whole genome shotgun sequence Length of sequence - 552351 bp Number of predicted genes - 521, with homology - 513 Number of transcription units - 215, operones - 131 average op.length - 3.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 61 - 87 -1.0 1 1 Op 1 . - CDS 93 - 1193 1277 ## Apre_1333 tetratricopeptide TPR_2 repeat-containing protein 2 1 Op 2 . - CDS 1193 - 1894 473 ## Apre_1334 hypothetical protein 3 1 Op 3 . - CDS 1895 - 3592 1941 ## COG0018 Arginyl-tRNA synthetase 4 1 Op 4 2/0.064 - CDS 3602 - 5947 2379 ## COG1193 Mismatch repair ATPase (MutS family) 5 1 Op 5 . - CDS 5947 - 8157 1934 ## COG0826 Collagenase and related proteases 6 1 Op 6 . - CDS 8150 - 8647 498 ## Apre_1338 hypothetical protein 7 1 Op 7 40/0.000 - CDS 8657 - 11044 2818 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 8 1 Op 8 4/0.043 - CDS 11053 - 12075 1233 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit - Prom 12173 - 12232 3.2 - Term 12084 - 12117 2.2 9 2 Op 1 4/0.043 - CDS 12303 - 13022 583 ## COG0566 rRNA methylases 10 2 Op 2 . - CDS 13022 - 13375 580 ## PROTEIN SUPPORTED gi|227485252|ref|ZP_03915568.1| ribosomal protein L20 11 2 Op 3 . - CDS 13386 - 13607 364 ## PROTEIN SUPPORTED gi|227485253|ref|ZP_03915569.1| ribosomal protein L35 12 2 Op 4 . - CDS 13588 - 14145 370 ## PROTEIN SUPPORTED gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 - Prom 14236 - 14295 9.2 13 3 Op 1 . - CDS 14310 - 15164 1111 ## COG1307 Uncharacterized protein conserved in bacteria 14 3 Op 2 . - CDS 15152 - 15676 426 ## EF1190 hypothetical protein 15 3 Op 3 . - CDS 15717 - 16463 676 ## Apre_1347 hypothetical protein - Prom 16544 - 16603 9.6 + Prom 16458 - 16517 11.9 16 4 Op 1 . + CDS 16539 - 17018 725 ## COG2606 Uncharacterized conserved protein 17 4 Op 2 . + CDS 17015 - 17695 612 ## Apre_1349 hypothetical protein + Term 17702 - 17750 10.1 - Term 17695 - 17732 7.3 18 5 Tu 1 . - CDS 17739 - 19088 1690 ## COG0427 Acetyl-CoA hydrolase - Prom 19114 - 19173 10.2 - Term 19191 - 19231 7.4 19 6 Op 1 20/0.000 - CDS 19244 - 20425 2115 ## COG0183 Acetyl-CoA acetyltransferase 20 6 Op 2 7/0.043 - CDS 20461 - 21303 1355 ## COG1250 3-hydroxyacyl-CoA dehydrogenase 21 6 Op 3 . - CDS 21316 - 22095 1060 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 22177 - 22236 11.2 - Term 22249 - 22304 3.1 22 7 Op 1 29/0.000 - CDS 22335 - 23336 1321 ## COG2025 Electron transfer flavoprotein, alpha subunit 23 7 Op 2 2/0.064 - CDS 23346 - 24155 1171 ## COG2086 Electron transfer flavoprotein, beta subunit 24 7 Op 3 . - CDS 24174 - 25310 1501 ## COG1960 Acyl-CoA dehydrogenases - Prom 25367 - 25426 12.2 + Prom 25610 - 25669 8.8 25 8 Tu 1 . + CDS 25705 - 27129 1734 ## COG0277 FAD/FMN-containing dehydrogenases + Term 27162 - 27201 3.0 - Term 27141 - 27197 17.0 26 9 Op 1 . - CDS 27199 - 28485 1430 ## COG0124 Histidyl-tRNA synthetase 27 9 Op 2 . - CDS 28561 - 29235 699 ## Apre_1364 hypothetical protein - TRNA 29278 - 29351 69.8 # Cys GCA 0 0 - TRNA 29363 - 29437 92.3 # Gly GCC 0 0 28 10 Tu 1 1/0.128 - CDS 29665 - 30996 767 ## COG0534 Na+-driven multidrug efflux pump - Prom 31031 - 31090 6.9 - Term 31070 - 31099 1.4 29 11 Op 1 36/0.000 - CDS 31104 - 33023 1157 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 30 11 Op 2 4/0.043 - CDS 33010 - 33768 307 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 33788 - 33847 4.7 - Term 33801 - 33840 3.1 31 12 Op 1 40/0.000 - CDS 33849 - 34790 638 ## COG0642 Signal transduction histidine kinase 32 12 Op 2 . - CDS 34777 - 35451 890 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Term 35471 - 35509 3.0 33 13 Op 1 35/0.000 - CDS 35517 - 37385 217 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 34 13 Op 2 . - CDS 37378 - 39141 1653 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 35 13 Op 3 . - CDS 39129 - 39575 494 ## Apre_1367 transcriptional regulator, MarR family - Prom 39621 - 39680 6.8 - Term 39964 - 39999 4.2 36 14 Tu 1 . - CDS 40008 - 46841 7904 ## FMG_0048 hypothetical protein - Prom 46885 - 46944 8.2 - Term 47216 - 47251 4.2 37 15 Op 1 . - CDS 47260 - 57828 11795 ## FMG_0048 hypothetical protein - Prom 58029 - 58088 2.6 38 15 Op 2 . - CDS 58116 - 58595 484 ## FMG_0048 hypothetical protein - Prom 58661 - 58720 9.0 + Prom 58711 - 58770 7.9 39 16 Op 1 . + CDS 58836 - 59741 985 ## COG0714 MoxR-like ATPases 40 16 Op 2 . + CDS 59734 - 61464 1545 ## Apre_1369 hypothetical protein + Term 61468 - 61514 6.1 - Term 61455 - 61502 7.1 41 17 Op 1 . - CDS 61507 - 63078 1775 ## COG0728 Uncharacterized membrane protein, putative virulence factor 42 17 Op 2 8/0.021 - CDS 63145 - 64803 221 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 43 17 Op 3 . - CDS 64793 - 66535 1522 ## COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components - Prom 66562 - 66621 5.5 - Term 66647 - 66677 1.1 44 18 Op 1 . - CDS 66697 - 68223 1919 ## COG4624 Iron only hydrogenase large subunit, C-terminal domain 45 18 Op 2 . - CDS 68252 - 68560 513 ## Apre_1372 hypothetical protein 46 18 Op 3 40/0.000 - CDS 68625 - 69938 1397 ## COG0642 Signal transduction histidine kinase 47 18 Op 4 7/0.043 - CDS 69935 - 70594 619 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 48 18 Op 5 32/0.000 - CDS 70594 - 71211 636 ## COG0704 Phosphate uptake regulator 49 18 Op 6 41/0.000 - CDS 71211 - 72074 312 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 50 18 Op 7 38/0.000 - CDS 72083 - 72898 905 ## COG0581 ABC-type phosphate transport system, permease component 51 18 Op 8 39/0.000 - CDS 72908 - 73771 794 ## COG0573 ABC-type phosphate transport system, permease component 52 18 Op 9 . - CDS 73773 - 74714 1408 ## COG0226 ABC-type phosphate transport system, periplasmic component - Prom 74791 - 74850 4.5 - Term 74803 - 74833 3.0 53 19 Tu 1 . - CDS 74866 - 76236 1810 ## COG2233 Xanthine/uracil permeases - Prom 76464 - 76523 8.1 + Prom 76319 - 76378 10.5 54 20 Tu 1 . + CDS 76529 - 77536 1174 ## COG2502 Asparagine synthetase A + Term 77543 - 77584 5.6 - Term 77531 - 77572 5.6 55 21 Op 1 . - CDS 77578 - 78225 741 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 56 21 Op 2 35/0.000 - CDS 78227 - 79030 510 ## COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 57 21 Op 3 33/0.000 - CDS 79017 - 80045 789 ## COG0609 ABC-type Fe3+-siderophore transport system, permease component 58 21 Op 4 2/0.064 - CDS 80042 - 81244 1752 ## COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component 59 21 Op 5 . - CDS 81245 - 82003 659 ## COG0500 SAM-dependent methyltransferases - Prom 82042 - 82101 8.6 + Prom 81981 - 82040 12.2 60 22 Tu 1 . + CDS 82099 - 82692 486 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 82696 - 82742 -0.5 - Term 82683 - 82728 0.2 61 23 Op 1 . - CDS 82744 - 84534 1712 ## COG0514 Superfamily II DNA helicase 62 23 Op 2 . - CDS 84570 - 85763 1370 ## Apre_1414 hypothetical protein 63 23 Op 3 . - CDS 85753 - 86145 243 ## gi|227485305|ref|ZP_03915621.1| hypothetical protein HMPREF0072_0708 64 23 Op 4 8/0.021 - CDS 86142 - 86882 718 ## COG0101 Pseudouridylate synthase 65 23 Op 5 34/0.000 - CDS 86879 - 87673 704 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 66 23 Op 6 15/0.000 - CDS 87666 - 88523 459 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 67 23 Op 7 . - CDS 88520 - 89344 285 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 68 23 Op 8 . - CDS 89353 - 90798 1375 ## COG1376 Uncharacterized protein conserved in bacteria 69 23 Op 9 . - CDS 90779 - 91900 838 ## COG0116 Predicted N6-adenine-specific DNA methylase - Term 91941 - 91967 -1.0 70 23 Op 10 . - CDS 91970 - 92791 728 ## COG1073 Hydrolases of the alpha/beta superfamily 71 23 Op 11 . - CDS 92791 - 94161 1410 ## COG2509 Uncharacterized FAD-dependent dehydrogenases - Prom 94321 - 94380 9.9 + Prom 94277 - 94336 9.2 72 24 Tu 1 . + CDS 94370 - 95053 570 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) + Term 95170 - 95238 22.2 + Prom 95419 - 95478 4.5 73 25 Tu 1 . + CDS 95498 - 97234 2044 ## Apre_0318 hypothetical protein + Term 97250 - 97286 1.7 - Term 97565 - 97613 -0.6 74 26 Op 1 . - CDS 97642 - 99189 1525 ## FMG_1385 hypothetical protein 75 26 Op 2 . - CDS 99199 - 100644 1189 ## FMG_1386 hypothetical protein 76 26 Op 3 . - CDS 100664 - 101890 1419 ## COG4260 Putative virion core protein (lumpy skin disease virus) - Prom 102045 - 102104 10.5 - Term 102052 - 102103 5.3 77 27 Op 1 . - CDS 102114 - 103685 1147 ## gi|227485321|ref|ZP_03915637.1| hypothetical protein HMPREF0072_0724 78 27 Op 2 . - CDS 103737 - 105056 954 ## Bsel_2944 ABC-type sugar transporter periplasmic component-like protein - Prom 105144 - 105203 8.1 - Term 105186 - 105240 10.0 79 28 Op 1 . - CDS 105248 - 106150 965 ## COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 80 28 Op 2 . - CDS 106150 - 106932 821 ## COG4509 Uncharacterized protein conserved in bacteria - Prom 106990 - 107049 9.1 + Prom 106917 - 106976 6.1 81 29 Op 1 . + CDS 107020 - 107256 330 ## Apre_1387 glutaredoxin 82 29 Op 2 . + CDS 107265 - 108071 1222 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 108078 - 108108 4.3 - Term 108137 - 108176 3.0 83 30 Tu 1 . - CDS 108187 - 108441 312 ## gi|227485327|ref|ZP_03915643.1| hypothetical protein HMPREF0072_0730 - Prom 108516 - 108575 5.5 - Term 108551 - 108577 1.0 84 31 Op 1 . - CDS 108584 - 109063 787 ## COG1528 Ferritin-like protein 85 31 Op 2 . - CDS 109056 - 109361 342 ## Apre_1392 hypothetical protein 86 31 Op 3 . - CDS 109404 - 110003 556 ## COG1636 Uncharacterized protein conserved in bacteria - Term 110034 - 110078 6.5 87 32 Op 1 59/0.000 - CDS 110082 - 110474 645 ## PROTEIN SUPPORTED gi|227485331|ref|ZP_03915647.1| ribosomal protein S9 88 32 Op 2 . - CDS 110485 - 110925 770 ## PROTEIN SUPPORTED gi|227485332|ref|ZP_03915648.1| ribosomal protein L13 - Prom 111011 - 111070 2.5 89 33 Op 1 17/0.000 - CDS 111104 - 112507 1548 ## COG0168 Trk-type K+ transport systems, membrane components 90 33 Op 2 . - CDS 112570 - 113931 1929 ## COG0569 K+ transport systems, NAD-binding component 91 33 Op 3 . - CDS 113997 - 115190 1669 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 115210 - 115269 6.8 - Term 115225 - 115290 11.2 92 34 Op 1 25/0.000 - CDS 115298 - 116377 1184 ## COG0687 Spermidine/putrescine-binding periplasmic protein 93 34 Op 2 36/0.000 - CDS 116361 - 117164 650 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 94 34 Op 3 30/0.000 - CDS 117154 - 117951 665 ## COG1176 ABC-type spermidine/putrescine transport system, permease component I 95 34 Op 4 . - CDS 117944 - 119056 1356 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components - Prom 119082 - 119141 8.0 - Term 119161 - 119195 2.0 96 35 Tu 1 . - CDS 119199 - 119948 822 ## Apre_1401 hypothetical protein - Prom 119997 - 120056 9.9 + Prom 119953 - 120012 10.2 97 36 Op 1 . + CDS 120054 - 120326 475 ## COG2388 Predicted acetyltransferase + Term 120333 - 120363 2.0 + Prom 120354 - 120413 5.6 98 36 Op 2 . + CDS 120434 - 121594 966 ## COG0477 Permeases of the major facilitator superfamily + Term 121604 - 121652 9.4 - Term 121590 - 121640 9.2 99 37 Op 1 40/0.000 - CDS 121720 - 123015 1038 ## COG0642 Signal transduction histidine kinase 100 37 Op 2 . - CDS 123017 - 123712 853 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 123831 - 123890 10.9 + Prom 123705 - 123764 6.0 101 38 Op 1 . + CDS 123841 - 124734 275 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 102 38 Op 2 . + CDS 124736 - 125488 533 ## FMG_1407 hypothetical protein 103 38 Op 3 . + CDS 125497 - 126201 506 ## FMG_1406 hypothetical protein + Term 126276 - 126327 7.2 - Term 126263 - 126314 7.2 104 39 Tu 1 . - CDS 126335 - 127267 1098 ## COG2066 Glutaminase - Prom 127373 - 127432 7.4 + Prom 127282 - 127341 5.6 105 40 Op 1 . + CDS 127365 - 127955 740 ## Apre_0304 response regulator receiver protein 106 40 Op 2 . + CDS 128010 - 129173 1331 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 129302 - 129339 -1.0 - Term 129167 - 129207 5.3 107 41 Op 1 . - CDS 129213 - 130220 1382 ## COG4086 Predicted secreted protein 108 41 Op 2 . - CDS 130217 - 131011 1102 ## COG0489 ATPases involved in chromosome partitioning - Prom 131110 - 131169 4.9 109 42 Op 1 34/0.000 + CDS 131479 - 133053 1878 ## COG0765 ABC-type amino acid transport system, permease component 110 42 Op 2 . + CDS 133031 - 133765 561 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 111 42 Op 3 . + CDS 133765 - 133929 64 ## gi|227485355|ref|ZP_03915671.1| hypothetical protein HMPREF0072_0758 112 42 Op 4 . + CDS 133922 - 135421 1484 ## COG0728 Uncharacterized membrane protein, putative virulence factor + Term 135444 - 135492 6.6 + Prom 135438 - 135497 4.0 113 43 Op 1 . + CDS 135560 - 135850 210 ## 114 43 Op 2 . + CDS 135774 - 136034 106 ## - Term 135904 - 135948 -0.2 115 44 Op 1 . - CDS 136093 - 136377 254 ## COG2827 Predicted endonuclease containing a URI domain 116 44 Op 2 . - CDS 136392 - 137633 1674 ## COG2195 Di- and tripeptidases - Term 137653 - 137690 2.2 117 45 Op 1 . - CDS 137709 - 138977 1346 ## gi|227485359|ref|ZP_03915675.1| conserved hypothetical protein 118 45 Op 2 . - CDS 139099 - 140133 813 ## COG2348 Uncharacterized protein involved in methicillin resistance - Prom 140221 - 140280 9.2 - Term 140274 - 140304 2.0 119 46 Tu 1 . - CDS 140309 - 140758 531 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 140797 - 140856 5.9 120 47 Tu 1 . - CDS 140863 - 143982 3604 ## COG0060 Isoleucyl-tRNA synthetase - Prom 144085 - 144144 5.3 - Term 143994 - 144027 4.5 121 48 Op 1 . - CDS 144225 - 144716 768 ## Apre_0283 hypothetical protein 122 48 Op 2 . - CDS 144709 - 145191 604 ## COG0386 Glutathione peroxidase - Prom 145211 - 145270 9.7 - Term 145255 - 145284 0.4 123 49 Tu 1 3/0.043 - CDS 145291 - 146175 1295 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 146386 - 146445 3.4 - Term 146504 - 146541 4.5 124 50 Op 1 22/0.000 - CDS 146556 - 147434 1417 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen 125 50 Op 2 32/0.000 - CDS 147502 - 148167 915 ## COG2011 ABC-type metal ion transport system, permease component 126 50 Op 3 . - CDS 148154 - 149185 1047 ## COG1135 ABC-type metal ion transport system, ATPase component 127 50 Op 4 . - CDS 149182 - 150387 1435 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 150416 - 150475 4.3 128 51 Op 1 . - CDS 150732 - 151889 1133 ## COG1160 Predicted GTPases 129 51 Op 2 . - CDS 151873 - 153291 1898 ## COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes - Prom 153318 - 153377 9.8 - Term 153680 - 153709 0.5 130 52 Tu 1 . - CDS 153791 - 154816 1042 ## COG0502 Biotin synthase and related enzymes - Prom 154844 - 154903 2.6 - Term 154831 - 154861 2.3 131 53 Op 1 . - CDS 154921 - 155574 601 ## Apre_0269 hypothetical protein 132 53 Op 2 . - CDS 155546 - 156235 779 ## COG3884 Acyl-ACP thioesterase - Term 156240 - 156271 2.5 133 53 Op 3 . - CDS 156276 - 157478 1485 ## COG0793 Periplasmic protease - Prom 157523 - 157582 11.7 + Prom 157506 - 157565 8.9 134 54 Tu 1 . + CDS 157657 - 158646 1044 ## COG0491 Zn-dependent hydrolases, including glyoxylases + Term 158663 - 158703 1.1 - Term 158714 - 158748 -0.1 135 55 Op 1 . - CDS 158789 - 159373 586 ## gi|227485379|ref|ZP_03915695.1| possible resolvase 136 55 Op 2 . - CDS 159375 - 161471 1809 ## Lebu_1231 hypothetical protein - Prom 161509 - 161568 6.0 - Term 161560 - 161599 3.1 137 56 Tu 1 . - CDS 161607 - 163019 795 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 163123 - 163182 7.9 - Term 163276 - 163319 8.0 138 57 Tu 1 . - CDS 163360 - 163905 628 ## gi|227485382|ref|ZP_03915698.1| hypothetical protein HMPREF0072_0785 - Prom 163944 - 164003 3.9 - Term 163949 - 164014 14.1 139 58 Op 1 1/0.128 - CDS 164021 - 164851 793 ## COG3764 Sortase (surface protein transpeptidase) 140 58 Op 2 1/0.128 - CDS 164880 - 165749 1199 ## COG3764 Sortase (surface protein transpeptidase) 141 58 Op 3 1/0.128 - CDS 165742 - 166713 898 ## COG3764 Sortase (surface protein transpeptidase) - Prom 166761 - 166820 6.0 - Term 166796 - 166838 5.0 142 59 Op 1 . - CDS 166841 - 168313 1400 ## COG4932 Predicted outer membrane protein 143 59 Op 2 . - CDS 168256 - 168663 272 ## gi|227485387|ref|ZP_03915703.1| hypothetical protein HMPREF0072_0790 - Prom 168843 - 168902 8.6 - Term 169157 - 169189 -0.9 144 60 Tu 1 . - CDS 169299 - 170537 596 ## COG4325 Predicted membrane protein - Prom 170610 - 170669 8.8 145 61 Op 1 . - CDS 170878 - 171081 139 ## gi|227485390|ref|ZP_03915706.1| hypothetical protein HMPREF0072_0793 146 61 Op 2 . - CDS 171083 - 171658 693 ## Apre_0343 KilA domain-containing protein - Prom 171711 - 171770 2.7 147 62 Tu 1 . - CDS 171772 - 171921 60 ## HMPREF0868_0421 hypothetical protein - Prom 171954 - 172013 8.4 - Term 172341 - 172381 -0.6 148 63 Tu 1 . - CDS 172461 - 173336 641 ## COG0583 Transcriptional regulator - Prom 173435 - 173494 11.7 + Prom 173339 - 173398 13.0 149 64 Tu 1 . + CDS 173442 - 174476 1258 ## COG2855 Predicted membrane protein + Term 174488 - 174541 -0.7 - Term 175382 - 175443 3.2 150 65 Op 1 . - CDS 175459 - 175644 233 ## gi|227485396|ref|ZP_03915712.1| hypothetical protein HMPREF0072_0799 151 65 Op 2 . - CDS 175644 - 175976 399 ## gi|227485397|ref|ZP_03915713.1| conserved hypothetical protein - Prom 176141 - 176200 7.0 152 66 Tu 1 . - CDS 176203 - 179628 1549 ## Moth_0643 hypothetical protein - Prom 179832 - 179891 7.1 + Prom 179976 - 180035 17.0 153 67 Tu 1 . + CDS 180221 - 181426 588 ## Bphy_7318 FRG domain-containing protein + Term 181446 - 181501 13.6 154 68 Op 1 . + CDS 181792 - 182007 183 ## SDEG_0952 hypothetical protein 155 68 Op 2 40/0.000 + CDS 182000 - 182647 620 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 156 68 Op 3 4/0.043 + CDS 182640 - 183617 755 ## COG0642 Signal transduction histidine kinase + Term 183627 - 183661 0.3 + Prom 183635 - 183694 3.1 157 69 Op 1 36/0.000 + CDS 183717 - 184406 325 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 158 69 Op 2 . + CDS 184393 - 186888 1795 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 186895 - 186931 4.1 159 70 Op 1 . - CDS 186912 - 187151 194 ## FMG_0943 hypothetical protein 160 70 Op 2 . - CDS 187153 - 187434 252 ## MGAS10750_Spy1711 hypothetical protein - Prom 187491 - 187550 7.6 161 71 Op 1 . - CDS 187567 - 187737 159 ## gi|227485407|ref|ZP_03915723.1| hypothetical protein HMPREF0072_0810 162 71 Op 2 . - CDS 187829 - 189271 653 ## NT01CX_0452 hypothetical protein 163 71 Op 3 . - CDS 189281 - 189652 317 ## gi|227485409|ref|ZP_03915725.1| conserved hypothetical protein - Prom 189689 - 189748 6.3 - Term 189718 - 189755 5.5 164 72 Op 1 . - CDS 189763 - 190011 316 ## gi|227485410|ref|ZP_03915726.1| hypothetical protein HMPREF0072_0813 165 72 Op 2 . - CDS 190018 - 190380 307 ## MGAS10750_Spy1711 hypothetical protein 166 73 Tu 1 . - CDS 192418 - 193851 935 ## COG5545 Predicted P-loop ATPase and inactivated derivatives - Prom 193906 - 193965 6.2 167 74 Op 1 . - CDS 193999 - 194361 339 ## CLOST_0301 hypothetical protein 168 74 Op 2 . - CDS 194354 - 195478 563 ## COG0582 Integrase 169 74 Op 3 . - CDS 195480 - 195674 231 ## CLOST_0299 transcriptional regulator (modular protein) - Prom 195770 - 195829 10.8 + Prom 195729 - 195788 8.5 170 75 Tu 1 . + CDS 195972 - 196367 339 ## HS_0422 transcriptional regulator - Term 196748 - 196784 2.5 171 76 Tu 1 . - CDS 196795 - 197646 724 ## HMPREF9243_1941 transcriptional regulator, MerR family - Term 197983 - 198017 4.4 172 77 Tu 1 . - CDS 198090 - 199916 791 ## gi|227485418|ref|ZP_03915734.1| conserved hypothetical protein - Term 200447 - 200488 5.5 173 78 Op 1 . - CDS 200684 - 201922 334 ## COG0582 Integrase 174 78 Op 2 . - CDS 201915 - 202115 236 ## LAR_1503 hypothetical protein 175 78 Op 3 . - CDS 202118 - 202612 343 ## Sez_0300 hypothetical protein 176 78 Op 4 . - CDS 202609 - 202806 115 ## gi|227485422|ref|ZP_03915738.1| hypothetical protein HMPREF0072_0825 177 78 Op 5 . - CDS 202787 - 203308 373 ## Sez_0300 hypothetical protein - Prom 203332 - 203391 3.3 178 79 Op 1 . - CDS 203424 - 204716 457 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 179 79 Op 2 . - CDS 204713 - 205057 404 ## gi|227485425|ref|ZP_03915741.1| hypothetical protein HMPREF0072_0828 180 79 Op 3 . - CDS 205054 - 205428 358 ## gi|227485426|ref|ZP_03915742.1| hypothetical protein HMPREF0072_0829 - Prom 205615 - 205674 9.6 + Prom 205601 - 205660 5.3 181 80 Tu 1 . + CDS 205726 - 206793 660 ## gi|227485427|ref|ZP_03915743.1| hypothetical protein HMPREF0072_0830 182 81 Tu 1 . - CDS 206799 - 207083 97 ## gi|227485428|ref|ZP_03915744.1| conserved hypothetical protein - Prom 207285 - 207344 6.6 - Term 207188 - 207224 -0.8 183 82 Op 1 . - CDS 207380 - 207928 570 ## ATP_00026 N-6 DNA methylase 184 82 Op 2 . - CDS 207930 - 209858 1368 ## Shel_20250 type I restriction-modification system methyltransferase subunit - Prom 210042 - 210101 5.6 - Term 210004 - 210078 22.5 185 83 Op 1 . - CDS 210229 - 211761 2013 ## COG0519 GMP synthase, PP-ATPase domain/subunit 186 83 Op 2 1/0.128 - CDS 211781 - 212611 959 ## COG1806 Uncharacterized protein conserved in bacteria 187 83 Op 3 19/0.000 - CDS 212621 - 214684 2392 ## COG0751 Glycyl-tRNA synthetase, beta subunit 188 83 Op 4 3/0.043 - CDS 214677 - 215558 940 ## COG0752 Glycyl-tRNA synthetase, alpha subunit 189 83 Op 5 16/0.000 - CDS 215548 - 216324 429 ## COG1381 Recombinational DNA repair protein (RecF pathway) 190 83 Op 6 6/0.043 - CDS 216305 - 217192 796 ## COG1159 GTPase 191 83 Op 7 3/0.043 - CDS 217189 - 217578 533 ## COG0295 Cytidine deaminase 192 83 Op 8 11/0.021 - CDS 217575 - 218381 825 ## COG0818 Diacylglycerol kinase 193 83 Op 9 17/0.000 - CDS 218386 - 218844 522 ## COG0319 Predicted metal-dependent hydrolase 194 83 Op 10 . - CDS 218841 - 219581 936 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase - Prom 219714 - 219773 5.3 - Term 219759 - 219798 0.1 195 84 Op 1 . - CDS 219834 - 220274 519 ## gi|227485441|ref|ZP_03915757.1| hypothetical protein HMPREF0072_0844 196 84 Op 2 3/0.043 - CDS 220264 - 221208 1408 ## COG4864 Uncharacterized protein conserved in bacteria 197 84 Op 3 . - CDS 221208 - 221831 565 ## COG1030 Membrane-bound serine protease (ClpP class) + Prom 222135 - 222194 9.1 198 85 Tu 1 . + CDS 222236 - 224767 2683 ## COG0474 Cation transport ATPase + Term 224788 - 224830 2.5 - Term 224770 - 224824 5.6 199 86 Op 1 . - CDS 224831 - 225844 1283 ## COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 200 86 Op 2 . - CDS 225857 - 227167 1488 ## COG1316 Transcriptional regulator - Prom 227280 - 227339 7.8 + Prom 227243 - 227302 10.4 201 87 Tu 1 . + CDS 227339 - 228655 1084 ## COG0733 Na+-dependent transporters of the SNF family + Term 228692 - 228729 1.6 - Term 228735 - 228769 -0.4 202 88 Op 1 . - CDS 228855 - 229028 191 ## gi|227485449|ref|ZP_03915765.1| hypothetical protein HMPREF0072_0852 203 88 Op 2 . - CDS 229077 - 229250 277 ## gi|227485450|ref|ZP_03915766.1| hypothetical protein HMPREF0072_0853 - Prom 229471 - 229530 9.1 + Prom 229508 - 229567 7.0 204 89 Op 1 . + CDS 229779 - 229985 107 ## 205 89 Op 2 . + CDS 230042 - 230305 147 ## 206 89 Op 3 . + CDS 230269 - 230475 170 ## + Prom 230604 - 230663 3.9 207 90 Tu 1 . + CDS 230696 - 230959 139 ## 208 91 Op 1 . - CDS 231197 - 232084 883 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) 209 91 Op 2 . - CDS 232086 - 233024 1096 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair 210 91 Op 3 . - CDS 233021 - 233668 710 ## HMPREF0424_0764 CRISPR system CASCADE complex protein CasE 211 91 Op 4 . - CDS 233650 - 234342 678 ## SmuNN2025_0607 hypothetical protein 212 91 Op 5 . - CDS 234385 - 235464 1175 ## HMPREF0421_20673 CSE4 family CRISPR-associated protein 213 91 Op 6 . - CDS 235448 - 236059 665 ## SmuNN2025_0605 hypothetical protein 214 91 Op 7 . - CDS 236071 - 237759 1302 ## HMPREF0421_20671 CSE1 family CRISPR-associated protein 215 91 Op 8 . - CDS 237752 - 240505 2231 ## COG1203 Predicted helicases - Prom 240593 - 240652 5.3 216 92 Op 1 . - CDS 240673 - 241215 775 ## COG0500 SAM-dependent methyltransferases 217 92 Op 2 . - CDS 241215 - 241766 691 ## Apre_0222 hypothetical protein 218 92 Op 3 . - CDS 241766 - 242161 609 ## Apre_0223 transcriptional regulator, XRE family - Prom 242249 - 242308 8.1 + Prom 242175 - 242234 9.2 219 93 Op 1 . + CDS 242322 - 243563 1214 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 220 93 Op 2 . + CDS 243635 - 244039 667 ## Apre_0290 hypothetical protein 221 93 Op 3 . + CDS 244039 - 244521 567 ## COG1576 Uncharacterized conserved protein - Term 244946 - 244996 0.7 222 94 Op 1 . - CDS 245023 - 246249 1355 ## COG0205 6-phosphofructokinase 223 94 Op 2 . - CDS 246246 - 247064 808 ## COG0561 Predicted hydrolases of the HAD superfamily 224 94 Op 3 . - CDS 247097 - 247558 502 ## COG2190 Phosphotransferase system IIA components - Prom 247619 - 247678 3.5 - Term 247762 - 247789 -0.9 225 95 Op 1 . - CDS 247801 - 247998 365 ## gi|227485469|ref|ZP_03915785.1| hypothetical protein HMPREF0072_0872 226 95 Op 2 . - CDS 248049 - 249260 979 ## PROTEIN SUPPORTED gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 - Prom 249485 - 249544 11.2 + Prom 249517 - 249576 8.2 227 96 Tu 1 . + CDS 249596 - 250264 502 ## FMG_1337 hypothetical protein + Term 250362 - 250395 1.0 + Prom 250320 - 250379 8.3 228 97 Tu 1 . + CDS 250619 - 251290 875 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 251388 - 251441 1.4 - Term 251265 - 251295 1.0 229 98 Op 1 1/0.128 - CDS 251489 - 252196 822 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 230 98 Op 2 . - CDS 252213 - 253490 1662 ## COG3875 Uncharacterized conserved protein - Prom 253525 - 253584 10.6 - Term 253987 - 254039 8.7 231 99 Tu 1 . - CDS 254059 - 260136 7500 ## FI9785_83 putative secreted protein - Prom 260207 - 260266 6.7 - Term 260646 - 260679 3.1 232 100 Tu 1 . - CDS 260689 - 261372 524 ## gi|227485476|ref|ZP_03915792.1| conserved hypothetical protein - Prom 261447 - 261506 80.3 233 101 Op 1 . - CDS 261808 - 266550 6093 ## gi|227485477|ref|ZP_03915793.1| conserved hypothetical protein 234 101 Op 2 . - CDS 266604 - 272132 6251 ## FMG_1334 hypothetical protein - Prom 272360 - 272419 10.2 235 102 Tu 1 . + CDS 272396 - 272878 655 ## HMPREF0424_1319 hypothetical protein + Term 272890 - 272923 4.7 - Term 272878 - 272911 4.7 236 103 Op 1 11/0.021 - CDS 272914 - 275208 2788 ## COG0498 Threonine synthase 237 103 Op 2 . - CDS 275205 - 276371 1277 ## COG0460 Homoserine dehydrogenase 238 103 Op 3 13/0.021 - CDS 276388 - 277365 1049 ## COG0136 Aspartate-semialdehyde dehydrogenase 239 103 Op 4 . - CDS 277367 - 278674 1522 ## COG0527 Aspartokinases - Prom 278882 - 278941 14.9 - Term 278941 - 279006 16.3 240 104 Op 1 9/0.021 - CDS 279012 - 280211 1054 ## COG1668 ABC-type Na+ efflux pump, permease component 241 104 Op 2 . - CDS 280204 - 281088 928 ## COG4152 ABC-type uncharacterized transport system, ATPase component 242 104 Op 3 . - CDS 281085 - 281807 639 ## Apre_1654 hypothetical protein 243 104 Op 4 . - CDS 281797 - 282009 289 ## COG1476 Predicted transcriptional regulators - Prom 282162 - 282221 8.4 + Prom 282200 - 282259 8.8 244 105 Tu 1 . + CDS 282282 - 282965 879 ## COG1811 Uncharacterized membrane protein, possible Na+ channel or pump + Term 283100 - 283148 -0.9 245 106 Op 1 . - CDS 283107 - 283964 817 ## gi|227485489|ref|ZP_03915805.1| hypothetical protein HMPREF0072_0892 246 106 Op 2 . - CDS 283964 - 285232 1592 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 285265 - 285324 10.9 - Term 285370 - 285411 6.0 247 107 Op 1 . - CDS 285436 - 286020 833 ## COG3341 Predicted double-stranded RNA/RNA-DNA hybrid binding protein 248 107 Op 2 . - CDS 286017 - 287474 1877 ## COG0366 Glycosidases 249 107 Op 3 . - CDS 287477 - 288112 917 ## COG0274 Deoxyribose-phosphate aldolase 250 107 Op 4 . - CDS 288102 - 289214 1038 ## COG2208 Serine phosphatase RsbU, regulator of sigma subunit - Prom 289253 - 289312 4.2 - Term 289279 - 289323 4.2 251 108 Tu 1 . - CDS 289333 - 291414 2355 ## gi|227485495|ref|ZP_03915811.1| conserved hypothetical protein - Prom 291438 - 291497 9.8 - Term 291570 - 291623 9.4 252 109 Op 1 50/0.000 - CDS 291679 - 292020 572 ## PROTEIN SUPPORTED gi|227485497|ref|ZP_03915813.1| ribosomal protein L17 253 109 Op 2 26/0.000 - CDS 292029 - 292979 1315 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 254 109 Op 3 36/0.000 - CDS 293012 - 293605 993 ## PROTEIN SUPPORTED gi|227485499|ref|ZP_03915815.1| ribosomal protein S4 255 109 Op 4 48/0.000 - CDS 293618 - 294016 671 ## PROTEIN SUPPORTED gi|227485500|ref|ZP_03915816.1| ribosomal protein S11 256 109 Op 5 2/0.064 - CDS 294020 - 294364 588 ## PROTEIN SUPPORTED gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 257 109 Op 6 . - CDS 294374 - 294487 198 ## PROTEIN SUPPORTED gi|227485502|ref|ZP_03915818.1| ribosomal protein L36 258 109 Op 7 . - CDS 294566 - 294784 242 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 - Prom 294825 - 294884 2.0 259 110 Op 1 28/0.000 - CDS 294909 - 295559 756 ## COG0563 Adenylate kinase and related kinases 260 110 Op 2 53/0.000 - CDS 295563 - 296837 861 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 261 110 Op 3 . - CDS 296853 - 297332 814 ## PROTEIN SUPPORTED gi|227485506|ref|ZP_03915822.1| ribosomal protein L15 262 110 Op 4 . - CDS 297341 - 297526 301 ## PROTEIN SUPPORTED gi|227485507|ref|ZP_03915823.1| ribosomal protein L30 263 110 Op 5 56/0.000 - CDS 297534 - 298043 849 ## PROTEIN SUPPORTED gi|227485508|ref|ZP_03915824.1| ribosomal protein S5 264 110 Op 6 46/0.000 - CDS 298056 - 298415 588 ## PROTEIN SUPPORTED gi|227485509|ref|ZP_03915825.1| ribosomal protein L18 265 110 Op 7 55/0.000 - CDS 298425 - 298964 923 ## PROTEIN SUPPORTED gi|227485510|ref|ZP_03915826.1| ribosomal protein L6 266 110 Op 8 50/0.000 - CDS 298975 - 299370 665 ## PROTEIN SUPPORTED gi|227485511|ref|ZP_03915827.1| ribosomal protein S8 267 110 Op 9 50/0.000 - CDS 299390 - 299575 333 ## PROTEIN SUPPORTED gi|227485512|ref|ZP_03915828.1| ribosomal protein S14 268 110 Op 10 48/0.000 - CDS 299587 - 300144 931 ## PROTEIN SUPPORTED gi|227485513|ref|ZP_03915829.1| ribosomal protein L5 269 110 Op 11 57/0.000 - CDS 300145 - 300453 521 ## PROTEIN SUPPORTED gi|227485514|ref|ZP_03915830.1| ribosomal protein L24 270 110 Op 12 50/0.000 - CDS 300463 - 300831 599 ## PROTEIN SUPPORTED gi|227485515|ref|ZP_03915831.1| ribosomal protein L14 271 110 Op 13 . - CDS 300849 - 301109 429 ## PROTEIN SUPPORTED gi|227485516|ref|ZP_03915832.1| ribosomal protein S17 272 110 Op 14 . - CDS 301115 - 301321 333 ## PROTEIN SUPPORTED gi|227485517|ref|ZP_03915833.1| ribosomal protein L29 273 110 Op 15 50/0.000 - CDS 301324 - 301752 735 ## PROTEIN SUPPORTED gi|227485518|ref|ZP_03915834.1| ribosomal protein L16 274 110 Op 16 61/0.000 - CDS 301780 - 302514 1252 ## PROTEIN SUPPORTED gi|227485519|ref|ZP_03915835.1| ribosomal protein S3 275 110 Op 17 59/0.000 - CDS 302522 - 302863 563 ## PROTEIN SUPPORTED gi|227485520|ref|ZP_03915836.1| ribosomal protein L22 276 110 Op 18 60/0.000 - CDS 302873 - 303160 501 ## PROTEIN SUPPORTED gi|227485521|ref|ZP_03915837.1| ribosomal protein S19 277 110 Op 19 61/0.000 - CDS 303170 - 304003 1433 ## PROTEIN SUPPORTED gi|227485522|ref|ZP_03915838.1| ribosomal protein L2 278 110 Op 20 61/0.000 - CDS 304015 - 304308 500 ## PROTEIN SUPPORTED gi|227485523|ref|ZP_03915839.1| ribosomal protein L23 279 110 Op 21 58/0.000 - CDS 304308 - 304931 1026 ## PROTEIN SUPPORTED gi|227485524|ref|ZP_03915840.1| ribosomal protein L4 280 110 Op 22 40/0.000 - CDS 304942 - 305577 1069 ## PROTEIN SUPPORTED gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 281 110 Op 23 . - CDS 305657 - 305968 510 ## PROTEIN SUPPORTED gi|227485526|ref|ZP_03915842.1| ribosomal protein S10 - Prom 306146 - 306205 8.9 + Prom 306122 - 306181 8.8 282 111 Tu 1 . + CDS 306380 - 308302 2612 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 308328 - 308370 7.8 - Term 308305 - 308366 9.1 283 112 Op 1 . - CDS 308521 - 309462 1009 ## Apre_1590 2-keto-3-deoxygluconate permease - Prom 309609 - 309668 4.2 284 112 Op 2 . - CDS 309682 - 311373 2033 ## M6_Spy1173 LPXTG anchored putative adhesin - Prom 311418 - 311477 19.2 - Term 311493 - 311525 1.7 285 113 Tu 1 . - CDS 311572 - 312288 839 ## gi|227485530|ref|ZP_03915846.1| hypothetical protein HMPREF0072_0933 - Prom 312384 - 312443 10.0 - Term 312523 - 312589 -0.7 286 114 Op 1 8/0.021 - CDS 312611 - 313555 1110 ## COG0524 Sugar kinases, ribokinase family 287 114 Op 2 . - CDS 313576 - 314538 772 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase 288 114 Op 3 . - CDS 314544 - 315494 882 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Term 315843 - 315908 7.6 289 115 Op 1 . - CDS 315954 - 317444 1298 ## COG3333 Uncharacterized protein conserved in bacteria 290 115 Op 2 . - CDS 317453 - 317893 330 ## gi|227485536|ref|ZP_03915852.1| conserved hypothetical protein 291 115 Op 3 . - CDS 317966 - 318958 1110 ## COG3181 Uncharacterized protein conserved in bacteria 292 115 Op 4 . - CDS 319027 - 319782 900 ## COG3836 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase - Prom 319959 - 320018 7.5 + Prom 319978 - 320037 5.5 293 116 Tu 1 . + CDS 320082 - 321113 698 ## COG1609 Transcriptional regulators + Term 321146 - 321197 -0.3 294 117 Op 1 . - CDS 321310 - 321936 704 ## COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase - Prom 322036 - 322095 6.2 - Term 322049 - 322086 -0.2 295 117 Op 2 . - CDS 322176 - 322415 346 ## Apre_1606 chromate transporter - Prom 322455 - 322514 80.4 296 118 Op 1 7/0.043 - CDS 322579 - 322869 363 ## COG2059 Chromate transport protein ChrA 297 118 Op 2 . - CDS 322859 - 323416 628 ## COG2059 Chromate transport protein ChrA - Prom 323458 - 323517 8.7 + Prom 323422 - 323481 5.2 298 119 Op 1 . + CDS 323505 - 323993 552 ## COG0262 Dihydrofolate reductase 299 119 Op 2 . + CDS 323990 - 324235 352 ## Apre_1627 hypothetical protein + Term 324248 - 324294 9.8 - Term 324240 - 324277 4.2 300 120 Op 1 1/0.128 - CDS 324286 - 324963 683 ## COG0176 Transaldolase 301 120 Op 2 . - CDS 324976 - 325596 682 ## COG0036 Pentose-5-phosphate-3-epimerase 302 120 Op 3 . - CDS 325636 - 326544 916 ## COG1482 Phosphomannose isomerase - Term 326556 - 326597 8.8 303 121 Op 1 13/0.021 - CDS 326604 - 327428 987 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 304 121 Op 2 13/0.021 - CDS 327444 - 328268 789 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 305 121 Op 3 9/0.021 - CDS 328330 - 328824 646 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 306 121 Op 4 . - CDS 328842 - 329267 553 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA - Prom 329309 - 329368 9.5 + Prom 329339 - 329398 10.3 307 122 Op 1 . + CDS 329429 - 330136 877 ## COG0274 Deoxyribose-phosphate aldolase 308 122 Op 2 . + CDS 330222 - 330854 344 ## COG2188 Transcriptional regulators + Term 330881 - 330927 1.1 - Term 330869 - 330913 5.3 309 123 Op 1 6/0.043 - CDS 331142 - 331756 631 ## COG0352 Thiamine monophosphate synthase 310 123 Op 2 1/0.128 - CDS 331753 - 332574 1093 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 311 123 Op 3 . - CDS 332549 - 333088 408 ## COG4732 Predicted membrane protein - Prom 333118 - 333177 5.6 - Term 333271 - 333331 4.0 312 124 Op 1 . - CDS 333543 - 333734 275 ## gi|227485559|ref|ZP_03915875.1| hypothetical protein HMPREF0072_0962 313 124 Op 2 19/0.000 - CDS 333721 - 334152 627 ## COG0822 NifU homolog involved in Fe-S cluster formation 314 124 Op 3 24/0.000 - CDS 334152 - 335372 1531 ## COG0520 Selenocysteine lyase 315 124 Op 4 12/0.021 - CDS 335374 - 336417 1306 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 316 124 Op 5 41/0.000 - CDS 336417 - 337829 1524 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 317 124 Op 6 . - CDS 337831 - 338562 196 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 338633 - 338692 9.9 318 125 Tu 1 . - CDS 338694 - 338960 285 ## COG1925 Phosphotransferase system, HPr-related proteins - Prom 339166 - 339225 10.6 319 126 Tu 1 . - CDS 339229 - 339411 113 ## gi|227485566|ref|ZP_03915882.1| hypothetical protein HMPREF0072_0969 - Prom 339451 - 339510 5.4 320 127 Op 1 . - CDS 339542 - 340048 424 ## Apre_0714 hypothetical protein 321 127 Op 2 . - CDS 340059 - 340364 279 ## Apre_0713 hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein 322 127 Op 3 . - CDS 340391 - 341017 310 ## Apre_0712 hypothetical protein 323 127 Op 4 . - CDS 341071 - 341898 849 ## COG0500 SAM-dependent methyltransferases - Prom 341952 - 342011 6.2 - Term 342349 - 342383 4.0 324 128 Op 1 . - CDS 342399 - 343799 1937 ## COG2195 Di- and tripeptidases 325 128 Op 2 . - CDS 343803 - 345104 1133 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases - Term 345121 - 345148 -0.8 326 128 Op 3 . - CDS 345150 - 345788 620 ## Apre_0314 hypothetical protein 327 128 Op 4 . - CDS 345844 - 346386 538 ## Apre_0313 hypothetical protein - Prom 346415 - 346474 8.9 - Term 346531 - 346564 3.1 328 129 Op 1 11/0.021 - CDS 346591 - 347715 1195 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 329 129 Op 2 21/0.000 - CDS 347708 - 348784 1218 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 330 129 Op 3 . - CDS 348777 - 350354 185 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Term 350373 - 350418 3.6 331 129 Op 4 . - CDS 350426 - 351802 1893 ## Amico_0357 hypothetical protein - Prom 351825 - 351884 7.0 332 130 Op 1 . - CDS 351959 - 352453 374 ## COG4129 Predicted membrane protein 333 130 Op 2 . - CDS 352444 - 353238 844 ## Apre_0309 inosine/uridine-preferring nucleoside hydrolase - Term 353249 - 353303 7.0 334 131 Op 1 . - CDS 353306 - 354955 1365 ## Apre_0408 hypothetical protein 335 131 Op 2 . - CDS 354948 - 355682 311 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 - Prom 355702 - 355761 4.6 + Prom 355602 - 355661 4.3 336 132 Tu 1 . + CDS 355685 - 356086 246 ## gi|227485584|ref|ZP_03915900.1| hypothetical protein HMPREF0072_0987 + Term 356094 - 356153 -0.8 - Term 356081 - 356141 1.1 337 133 Op 1 . - CDS 356162 - 357184 1381 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 338 133 Op 2 6/0.043 - CDS 357215 - 357739 571 ## COG3688 Predicted RNA-binding protein containing a PIN domain 339 133 Op 3 7/0.043 - CDS 357726 - 358445 470 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 340 133 Op 4 1/0.128 - CDS 358430 - 359848 1564 ## COG0215 Cysteinyl-tRNA synthetase 341 133 Op 5 . - CDS 359848 - 361329 1765 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases - Prom 361428 - 361487 13.2 - Term 361369 - 361419 5.4 342 134 Op 1 . - CDS 361511 - 361969 484 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 343 134 Op 2 . - CDS 361969 - 362616 776 ## COG0546 Predicted phosphatases - Prom 362699 - 362758 5.2 + Prom 362606 - 362665 11.8 344 135 Tu 1 . + CDS 362768 - 364210 1736 ## COG1488 Nicotinic acid phosphoribosyltransferase + Term 364214 - 364245 2.5 - Term 364203 - 364231 1.0 345 136 Op 1 . - CDS 364242 - 365504 1041 ## Apre_0148 hyaluronidase 346 136 Op 2 1/0.128 - CDS 365506 - 366450 968 ## COG1482 Phosphomannose isomerase 347 136 Op 3 . - CDS 366452 - 367321 1011 ## COG1686 D-alanyl-D-alanine carboxypeptidase - Prom 367538 - 367597 7.4 + Prom 367294 - 367353 8.7 348 137 Tu 1 . + CDS 367533 - 368402 237 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 368420 - 368459 2.1 - Term 368404 - 368448 3.5 349 138 Tu 1 . - CDS 368464 - 369771 1631 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 350 139 Op 1 . - CDS 370010 - 370312 239 ## gi|227485598|ref|ZP_03915914.1| hypothetical protein HMPREF0072_1001 - Prom 370332 - 370391 3.0 - Term 370366 - 370396 -0.4 351 139 Op 2 . - CDS 370398 - 371768 1362 ## COG1066 Predicted ATP-dependent serine protease 352 139 Op 3 . - CDS 371761 - 373062 1468 ## COG3572 Gamma-glutamylcysteine synthetase - Prom 373153 - 373212 5.1 + Prom 372983 - 373042 5.7 353 140 Tu 1 . + CDS 373127 - 373585 469 ## COG0350 Methylated DNA-protein cysteine methyltransferase + Term 373668 - 373697 2.1 - Term 373656 - 373685 2.1 354 141 Op 1 2/0.064 - CDS 373693 - 374778 1533 ## COG3839 ABC-type sugar transport systems, ATPase components 355 141 Op 2 20/0.000 - CDS 374783 - 375676 1013 ## COG3833 ABC-type maltose transport systems, permease component 356 141 Op 3 . - CDS 375678 - 377708 1840 ## COG1175 ABC-type sugar transport systems, permease components 357 141 Op 4 . - CDS 377714 - 378118 256 ## Apre_0130 hypothetical protein - Term 378119 - 378159 7.9 358 141 Op 5 . - CDS 378166 - 379500 1978 ## COG2182 Maltose-binding periplasmic proteins/domains - Prom 379537 - 379596 8.2 + Prom 379485 - 379544 11.1 359 142 Op 1 . + CDS 379755 - 381260 2217 ## COG4690 Dipeptidase 360 142 Op 2 . + CDS 381313 - 381960 785 ## Apre_0312 hypothetical protein + Term 381981 - 382013 2.5 - Term 381969 - 382001 2.5 361 143 Tu 1 . - CDS 382011 - 382175 88 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters - Prom 382413 - 382472 80.3 - Term 382207 - 382274 18.5 362 144 Op 1 34/0.000 - CDS 382474 - 382794 380 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 363 144 Op 2 3/0.043 - CDS 382791 - 384500 1987 ## COG1122 ABC-type cobalt transport system, ATPase component 364 144 Op 3 2/0.064 - CDS 384506 - 385057 815 ## COG4720 Predicted membrane protein 365 144 Op 4 . - CDS 385057 - 385893 857 ## COG1912 Uncharacterized conserved protein - Prom 386094 - 386153 8.9 - Term 386214 - 386269 3.6 366 145 Tu 1 . - CDS 386359 - 387546 1501 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Prom 387571 - 387630 6.3 367 146 Op 1 . - CDS 387690 - 389840 2695 ## COG0747 ABC-type dipeptide transport system, periplasmic component 368 146 Op 2 . - CDS 389881 - 390033 83 ## gi|227485617|ref|ZP_03915933.1| hypothetical protein HMPREF0072_1020 - Prom 390190 - 390249 5.3 - Term 390242 - 390277 5.1 369 147 Op 1 5/0.043 - CDS 390437 - 392881 1914 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 370 147 Op 2 . - CDS 392871 - 393764 866 ## COG3869 Arginine kinase 371 147 Op 3 . - CDS 393845 - 394429 545 ## Apre_0125 hypothetical protein 372 147 Op 4 . - CDS 394431 - 394892 233 ## PROTEIN SUPPORTED gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 - Prom 394997 - 395056 8.7 - Term 395023 - 395058 4.5 373 148 Tu 1 . - CDS 395151 - 395852 622 ## COG2738 Predicted Zn-dependent protease - Prom 395992 - 396051 6.5 374 149 Op 1 . - CDS 396409 - 397047 637 ## LAC30SC_05355 hypothetical protein 375 149 Op 2 . - CDS 397104 - 397535 580 ## COG2153 Predicted acyltransferase 376 149 Op 3 . - CDS 397555 - 398436 702 ## COG1032 Fe-S oxidoreductase - Prom 398462 - 398521 3.9 - Term 398496 - 398526 1.1 377 149 Op 4 . - CDS 398529 - 398876 203 ## gi|227485626|ref|ZP_03915942.1| hypothetical protein HMPREF0072_1029 - Prom 398915 - 398974 6.4 - Term 398952 - 398987 3.2 378 150 Op 1 . - CDS 399032 - 399958 1448 ## COG0549 Carbamate kinase 379 150 Op 2 . - CDS 399980 - 401074 1526 ## COG1915 Uncharacterized conserved protein 380 150 Op 3 . - CDS 401074 - 402249 1609 ## COG1915 Uncharacterized conserved protein 381 150 Op 4 . - CDS 402254 - 404785 1119 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 382 150 Op 5 . - CDS 404792 - 405967 1555 ## HMPREF0868_0363 hypothetical protein - Prom 406012 - 406071 3.7 - Term 406011 - 406041 -0.4 383 151 Op 1 . - CDS 406089 - 407453 796 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 384 151 Op 2 . - CDS 407588 - 408580 1476 ## COG0078 Ornithine carbamoyltransferase - Prom 408819 - 408878 11.2 + Prom 408768 - 408827 11.4 385 152 Tu 1 . + CDS 408852 - 410108 963 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 386 153 Op 1 17/0.000 - CDS 410169 - 410789 238 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 387 153 Op 2 44/0.000 - CDS 410783 - 411616 248 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 388 153 Op 3 49/0.000 - CDS 411591 - 412478 814 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 389 153 Op 4 38/0.000 - CDS 412462 - 413445 628 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 390 153 Op 5 . - CDS 413446 - 415119 2418 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 415232 - 415291 4.2 - Term 415180 - 415231 12.7 391 154 Tu 1 . - CDS 415318 - 415722 562 ## CHY_1174 hypothetical protein - Prom 415742 - 415801 9.0 - Term 415837 - 415871 2.0 392 155 Op 1 17/0.000 - CDS 416056 - 416715 940 ## COG0569 K+ transport systems, NAD-binding component 393 155 Op 2 . - CDS 416725 - 418071 1276 ## COG0168 Trk-type K+ transport systems, membrane components - Prom 418164 - 418223 7.5 + Prom 418033 - 418092 4.7 394 156 Tu 1 . + CDS 418209 - 419912 2197 ## Apre_0119 hypothetical protein 395 157 Tu 1 . + CDS 420598 - 420786 184 ## gi|227485646|ref|ZP_03915962.1| hypothetical protein HMPREF0072_1049 - Term 420930 - 420970 6.5 396 158 Tu 1 . - CDS 420992 - 422518 2175 ## COG2978 Putative p-aminobenzoyl-glutamate transporter - Prom 422542 - 422601 7.5 + Prom 422459 - 422518 11.0 397 159 Op 1 . + CDS 422747 - 423187 570 ## COG3279 Response regulator of the LytR/AlgR family 398 159 Op 2 . + CDS 423197 - 423622 361 ## Apre_1651 hypothetical protein + Term 423634 - 423665 1.7 - Term 423622 - 423653 2.5 399 160 Op 1 . - CDS 423659 - 424276 563 ## Apre_0193 hypothetical protein 400 160 Op 2 8/0.021 - CDS 424257 - 425123 1089 ## COG1131 ABC-type multidrug transport system, ATPase component 401 160 Op 3 . - CDS 425116 - 425493 336 ## COG1725 Predicted transcriptional regulators - Prom 425559 - 425618 8.0 - Term 425545 - 425618 14.1 402 161 Tu 1 . - CDS 425638 - 426870 1299 ## COG2309 Leucyl aminopeptidase (aminopeptidase T) - Prom 426905 - 426964 6.6 + Prom 427205 - 427264 7.3 403 162 Tu 1 . + CDS 427401 - 429200 2244 ## COG1164 Oligoendopeptidase F 404 163 Tu 1 . - CDS 429918 - 430550 548 ## COG3344 Retron-type reverse transcriptase - Prom 430697 - 430756 3.0 + Prom 431120 - 431179 6.0 405 164 Op 1 7/0.043 + CDS 431417 - 432259 832 ## COG3711 Transcriptional antiterminator 406 164 Op 2 3/0.043 + CDS 432305 - 432853 454 ## COG2190 Phosphotransferase system IIA components + Term 432925 - 432960 0.5 + Prom 433060 - 433119 15.8 407 165 Op 1 2/0.064 + CDS 433355 - 434950 972 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 408 165 Op 2 . + CDS 434952 - 436274 1228 ## COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases + Term 436316 - 436369 6.1 - Term 436460 - 436498 1.5 409 166 Op 1 . - CDS 436523 - 436999 483 ## COG3467 Predicted flavin-nucleotide-binding protein 410 166 Op 2 . - CDS 437010 - 438035 1402 ## COG1363 Cellulase M and related proteins - Prom 438261 - 438320 6.9 + Prom 438010 - 438069 7.0 411 167 Op 1 . + CDS 438112 - 438627 601 ## COG4894 Uncharacterized conserved protein 412 167 Op 2 . + CDS 438627 - 439091 548 ## gi|227485664|ref|ZP_03915980.1| hypothetical protein HMPREF0072_1067 + Term 439176 - 439209 2.1 - Term 439162 - 439195 2.1 413 168 Tu 1 . - CDS 439228 - 439950 763 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase - Prom 440139 - 440198 6.9 - Term 440302 - 440344 5.4 414 169 Tu 1 . - CDS 440352 - 440945 918 ## COG1592 Rubrerythrin - Prom 441040 - 441099 7.9 + Prom 441201 - 441260 8.2 415 170 Tu 1 . + CDS 441293 - 442564 1679 ## COG0166 Glucose-6-phosphate isomerase + Term 442571 - 442615 11.1 - Term 442562 - 442600 8.1 416 171 Op 1 . - CDS 442712 - 442864 136 ## HS_0660 hypothetical protein 417 171 Op 2 . - CDS 442891 - 443784 689 ## COG1266 Predicted metal-dependent membrane protease 418 171 Op 3 . - CDS 443781 - 444401 765 ## Apre_1660 hypothetical protein - Prom 444440 - 444499 5.8 + Prom 444352 - 444411 3.9 419 172 Tu 1 . + CDS 444458 - 445315 800 ## Apre_1661 hypothetical protein + Term 445369 - 445403 0.5 - Term 445306 - 445338 1.0 420 173 Tu 1 . - CDS 445344 - 445505 78 ## - Prom 445539 - 445598 8.8 - Term 445552 - 445580 3.0 421 174 Op 1 . - CDS 445611 - 446264 908 ## Apre_0090 redoxin domain-containing protein 422 174 Op 2 . - CDS 446254 - 446874 433 ## COG0348 Polyferredoxin - Prom 447048 - 447107 4.5 423 175 Op 1 . - CDS 447110 - 447244 56 ## gi|227485675|ref|ZP_03915991.1| hypothetical protein HMPREF0072_1078 424 175 Op 2 40/0.000 - CDS 447321 - 448361 820 ## COG0642 Signal transduction histidine kinase 425 175 Op 3 . - CDS 448411 - 449091 960 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 449295 - 449354 4.8 + Prom 449167 - 449226 9.3 426 176 Op 1 . + CDS 449323 - 449943 752 ## Apre_0084 hypothetical protein + Term 449947 - 449986 1.6 + Prom 449979 - 450038 8.6 427 176 Op 2 . + CDS 450095 - 450682 858 ## Apre_0084 hypothetical protein + Term 450683 - 450743 15.8 428 177 Tu 1 . - CDS 450885 - 453851 2984 ## HMPREF0868_0283 hypothetical protein - Term 454144 - 454191 12.2 429 178 Op 1 . - CDS 454342 - 455076 381 ## COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 430 178 Op 2 11/0.021 - CDS 455093 - 456349 1144 ## COG3037 Uncharacterized protein conserved in bacteria 431 178 Op 3 13/0.021 - CDS 456359 - 456634 372 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 432 178 Op 4 5/0.043 - CDS 456636 - 457073 487 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 433 178 Op 5 . - CDS 457074 - 458864 958 ## COG3711 Transcriptional antiterminator - Prom 458889 - 458948 11.2 - Term 459102 - 459141 7.4 434 179 Tu 1 . - CDS 459202 - 459615 504 ## EUBELI_01105 hypothetical protein - Prom 459635 - 459694 12.7 - Term 459761 - 459791 3.0 435 180 Op 1 2/0.064 - CDS 459805 - 461058 1895 ## COG0426 Uncharacterized flavoproteins 436 180 Op 2 . - CDS 461072 - 462997 2482 ## COG1960 Acyl-CoA dehydrogenases - Prom 463025 - 463084 10.1 + Prom 463300 - 463359 8.6 437 181 Tu 1 . + CDS 463406 - 464017 949 ## FMG_0084 N-acetylmuramoyl-L-alanine amidase + Term 464051 - 464090 6.0 + Prom 464093 - 464152 7.7 438 182 Tu 1 . + CDS 464222 - 464401 147 ## gi|227485690|ref|ZP_03916006.1| hypothetical protein HMPREF0072_1093 - Term 466045 - 466099 4.3 439 183 Tu 1 . - CDS 466128 - 466988 1065 ## COG1940 Transcriptional regulator/sugar kinase + Prom 467185 - 467244 7.9 440 184 Tu 1 . + CDS 467289 - 468428 1844 ## Clos_2845 peptidoglycan binding domain-containing protein + Term 468467 - 468504 1.2 - Term 468425 - 468486 -0.9 441 185 Tu 1 . - CDS 468506 - 469867 1070 ## COG0534 Na+-driven multidrug efflux pump - Term 469887 - 469926 5.0 442 186 Op 1 . - CDS 469932 - 471107 1321 ## COG3919 Predicted ATP-grasp enzyme 443 186 Op 2 . - CDS 471111 - 473033 2324 ## COG0441 Threonyl-tRNA synthetase - Prom 473069 - 473128 5.5 + Prom 473284 - 473343 11.4 444 187 Op 1 . + CDS 473443 - 474468 1161 ## COG1087 UDP-glucose 4-epimerase 445 187 Op 2 . + CDS 474392 - 475396 1003 ## Apre_1673 hypothetical protein + Term 475460 - 475513 1.2 - Term 475448 - 475500 6.5 446 188 Op 1 1/0.128 - CDS 475546 - 477045 1805 ## COG1640 4-alpha-glucanotransferase 447 188 Op 2 . - CDS 477048 - 478082 1230 ## COG1609 Transcriptional regulators - Prom 478120 - 478179 3.1 + Prom 478374 - 478433 6.2 448 189 Op 1 . + CDS 478471 - 478851 445 ## gi|227485702|ref|ZP_03916018.1| hypothetical protein HMPREF0072_1105 449 189 Op 2 . + CDS 478898 - 479335 453 ## gi|227485703|ref|ZP_03916019.1| hypothetical protein HMPREF0072_1106 + Term 479427 - 479464 -0.8 - Term 479542 - 479577 -0.8 450 190 Tu 1 . - CDS 479605 - 480960 1416 ## COG1253 Hemolysins and related proteins containing CBS domains - Term 480992 - 481025 -0.4 451 191 Op 1 . - CDS 481028 - 481978 1150 ## COG0598 Mg2+ and Co2+ transporters 452 191 Op 2 . - CDS 482051 - 483643 1720 ## COG1757 Na+/H+ antiporter - Prom 483664 - 483723 6.7 - Term 483923 - 483961 3.6 453 192 Op 1 16/0.000 - CDS 483962 - 484600 863 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 454 192 Op 2 16/0.000 - CDS 484604 - 485971 2094 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 455 192 Op 3 12/0.021 - CDS 485976 - 487733 2117 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 456 192 Op 4 13/0.021 - CDS 487745 - 488056 598 ## COG1436 Archaeal/vacuolar-type H+-ATPase subunit F 457 192 Op 5 11/0.021 - CDS 488049 - 489083 1394 ## COG1527 Archaeal/vacuolar-type H+-ATPase subunit C 458 192 Op 6 11/0.021 - CDS 489080 - 489643 664 ## COG1390 Archaeal/vacuolar-type H+-ATPase subunit E 459 192 Op 7 16/0.000 - CDS 489659 - 490126 761 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 460 192 Op 8 . - CDS 490126 - 492048 2348 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 461 192 Op 9 . - CDS 492035 - 492358 533 ## gi|227485715|ref|ZP_03916031.1| V family two sector ATPase - Prom 492384 - 492443 9.0 + Prom 492373 - 492432 8.3 462 193 Tu 1 . + CDS 492459 - 493544 1163 ## Apre_1693 hypothetical protein + Term 493545 - 493590 1.7 - Term 493590 - 493625 5.1 463 194 Op 1 . - CDS 493628 - 494686 1133 ## COG0208 Ribonucleotide reductase, beta subunit 464 194 Op 2 . - CDS 494696 - 494986 82 ## Apre_1697 hypothetical protein - Prom 495168 - 495227 9.9 + Prom 494970 - 495029 7.8 465 195 Tu 1 . + CDS 495187 - 495366 142 ## - Term 495919 - 495954 2.8 466 196 Tu 1 . - CDS 495976 - 498504 3063 ## COG0209 Ribonucleotide reductase, alpha subunit - Prom 498553 - 498612 3.9 - Term 498591 - 498635 1.2 467 197 Op 1 3/0.043 - CDS 498695 - 499168 517 ## COG1714 Predicted membrane protein/domain 468 197 Op 2 . - CDS 499158 - 500141 1403 ## COG0616 Periplasmic serine proteases (ClpP class) - Prom 500352 - 500411 10.8 + Prom 500287 - 500346 7.0 469 198 Op 1 2/0.064 + CDS 500383 - 501216 872 ## COG1606 ATP-utilizing enzymes of the PP-loop superfamily 470 198 Op 2 2/0.064 + CDS 501216 - 501974 1034 ## COG1691 NCAIR mutase (PurE)-related proteins 471 198 Op 3 . + CDS 501974 - 502915 1613 ## COG1641 Uncharacterized conserved protein 472 198 Op 4 . + CDS 502957 - 503340 540 ## COG1641 Uncharacterized conserved protein + Term 503345 - 503383 2.8 - Term 503928 - 503957 1.2 473 199 Op 1 . - CDS 503964 - 506006 1252 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 474 199 Op 2 . - CDS 506003 - 506473 559 ## Apre_1718 transcriptional regulator, MarR family - Prom 506493 - 506552 4.9 475 200 Op 1 11/0.021 - CDS 506561 - 507421 252 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 476 200 Op 2 . - CDS 507421 - 507729 371 ## COG0526 Thiol-disulfide isomerase and thioredoxins 477 200 Op 3 . - CDS 507747 - 508346 676 ## Apre_1722 nitrogen regulatory protein P-II (GlnB, GlnK) 478 200 Op 4 . - CDS 508346 - 509737 1397 ## HMPREF9243_1143 hypothetical protein - Term 509755 - 509787 2.4 479 201 Op 1 . - CDS 509800 - 510819 1646 ## COG0280 Phosphotransacetylase 480 201 Op 2 . - CDS 510894 - 511307 403 ## Apre_1725 hypothetical protein 481 201 Op 3 . - CDS 511364 - 511927 449 ## Apre_1726 hypothetical protein 482 201 Op 4 25/0.000 - CDS 511917 - 512843 1145 ## COG1475 Predicted transcriptional regulators 483 201 Op 5 . - CDS 512852 - 513790 962 ## COG1192 ATPases involved in chromosome partitioning 484 201 Op 6 . - CDS 513768 - 514982 1073 ## COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA - Prom 515006 - 515065 3.8 485 202 Op 1 . - CDS 515073 - 515876 590 ## COG1266 Predicted metal-dependent membrane protease 486 202 Op 2 24/0.000 - CDS 515904 - 516533 698 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division 487 202 Op 3 11/0.021 - CDS 516526 - 518412 2190 ## COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division 488 202 Op 4 . - CDS 518402 - 519766 1554 ## COG0486 Predicted GTPase - Prom 519900 - 519959 13.9 + Prom 519846 - 519905 10.9 489 203 Tu 1 . + CDS 520000 - 521691 2353 ## COG1283 Na+/phosphate symporter + Term 521701 - 521734 1.0 - Term 521728 - 521770 1.1 490 204 Op 1 11/0.021 - CDS 521789 - 523087 761 ## PROTEIN SUPPORTED gi|90020581|ref|YP_526408.1| ribosomal protein L16 491 204 Op 2 11/0.021 - CDS 523080 - 523556 336 ## COG3090 TRAP-type C4-dicarboxylate transport system, small permease component 492 204 Op 3 . - CDS 523597 - 524679 306 ## PROTEIN SUPPORTED gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 493 204 Op 4 . - CDS 524695 - 525402 728 ## COG0584 Glycerophosphoryl diester phosphodiesterase - Prom 525501 - 525560 9.4 - Term 525518 - 525556 -0.9 494 205 Tu 1 . - CDS 525562 - 526350 715 ## COG0647 Predicted sugar phosphatases of the HAD superfamily - Prom 526455 - 526514 10.2 + Prom 526423 - 526482 9.3 495 206 Tu 1 . + CDS 526557 - 527210 905 ## COG1285 Uncharacterized membrane protein + Term 527233 - 527281 10.1 - Term 527226 - 527259 3.1 496 207 Op 1 . - CDS 527272 - 528018 690 ## COG0863 DNA modification methylase 497 207 Op 2 . - CDS 528034 - 529371 1027 ## MLC_0510 hypothetical protein 498 207 Op 3 . - CDS 529355 - 530266 770 ## COG0338 Site-specific DNA methylase - Prom 530287 - 530346 4.8 - Term 530343 - 530370 -0.8 499 208 Op 1 16/0.000 - CDS 530379 - 531335 1515 ## COG1847 Predicted RNA-binding protein 500 208 Op 2 18/0.000 - CDS 531332 - 532042 668 ## COG0706 Preprotein translocase subunit YidC 501 208 Op 3 16/0.000 - CDS 532084 - 532299 165 ## COG0759 Uncharacterized conserved protein 502 208 Op 4 . - CDS 532289 - 532639 391 ## COG0594 RNase P protein component 503 208 Op 5 . - CDS 532657 - 532791 224 ## PROTEIN SUPPORTED gi|227500987|ref|ZP_03931036.1| ribosomal protein L34 - Prom 532818 - 532877 7.6 + Prom 533197 - 533256 8.7 504 209 Op 1 16/0.000 + CDS 533505 - 534884 1743 ## COG0593 ATPase involved in DNA replication initiation + Prom 534916 - 534975 3.3 505 209 Op 2 . + CDS 535107 - 536219 1182 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 506 209 Op 3 . + CDS 536224 - 536430 267 ## Apre_0003 S4 domain-containing protein 507 209 Op 4 9/0.021 + CDS 536430 - 537533 919 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 508 209 Op 5 24/0.000 + CDS 537511 - 539415 2206 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 509 209 Op 6 . + CDS 539425 - 541872 2880 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 510 209 Op 7 . + CDS 541865 - 542170 339 ## Apre_0007 anti-sigma-factor antagonist 511 209 Op 8 . + CDS 542173 - 542514 400 ## Apre_0008 putative anti-sigma regulatory factor, serine/threonine protein kinase 512 209 Op 9 . + CDS 542507 - 543283 942 ## COG1191 DNA-directed RNA polymerase specialized sigma subunit + Term 543393 - 543467 11.1 + Prom 543370 - 543429 7.4 513 210 Op 1 . + CDS 543496 - 544671 1433 ## COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 514 210 Op 2 . + CDS 544691 - 544990 283 ## Apre_0011 cupin 2 conserved barrel domain-containing protein + Prom 544992 - 545051 7.2 515 211 Op 1 . + CDS 545080 - 546405 1480 ## COG2461 Uncharacterized conserved protein + Prom 546412 - 546471 7.0 516 211 Op 2 . + CDS 546504 - 547544 1464 ## gi|227485769|ref|ZP_03916085.1| hypothetical protein HMPREF0072_1172 + Term 547552 - 547584 1.0 + Prom 547574 - 547633 4.4 517 212 Tu 1 . + CDS 547714 - 548874 838 ## COG1002 Type II restriction enzyme, methylase subunits + Term 548908 - 548968 1.6 + Prom 548935 - 548994 5.4 518 213 Tu 1 . + CDS 549030 - 549266 266 ## SPAP_0865 hypothetical protein + Prom 549926 - 549985 80.4 519 214 Tu 1 . + CDS 550029 - 550418 340 ## COG1484 DNA replication protein + Prom 550670 - 550729 80.4 520 215 Op 1 . + CDS 550862 - 551371 345 ## COG3645 Uncharacterized phage-encoded protein 521 215 Op 2 . + CDS 551364 - 552351 820 ## COG3505 Type IV secretory pathway, VirD4 components Predicted protein(s) >gi|229269867|gb|GG666044.1| GENE 1 93 - 1193 1277 366 aa, chain - ## HITS:1 COG:no KEGG:Apre_1333 NR:ns ## KEGG: Apre_1333 # Name: not_defined # Def: tetratricopeptide TPR_2 repeat-containing protein # Organism: A.prevotii # Pathway: not_defined # 4 366 3 365 365 385 60.0 1e-105 MGSLDGYFIKYTDRLAYIELREDSLNEELKGISLPIYVEDMKEGIKTGDFKNEINLEIIL EAMLINLAIDPNFLYRKEYEKVLKKYLKNIGDYTANKSVYCEESDKTKALLLARAGYILD SANKYNAYLYARLLWPLAYEDDGQYQNDFVKEALRILQEILKNDEKFKLSYYELGNIYSN LGEYIKARSYYNNALRLTDDEIAKNDIRNKLISIDDNAEIEQALYYIGKSNYNEAVRTLT KLLSKTKRADAYYYLGVAYQNLGNYENSIMAFEQSLELNADFRELYNDYAISLYLNKNEF EALKVIGEGLKKYPQDPRMTYNKIQINLVVGNTEKAKEDIEELLTYDDLTEEIKENLKII KHHYKL >gi|229269867|gb|GG666044.1| GENE 2 1193 - 1894 473 233 aa, chain - ## HITS:1 COG:no KEGG:Apre_1334 NR:ns ## KEGG: Apre_1334 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 230 3 231 233 172 42.0 9e-42 MNKFKDFLGVSKIAFKETIKKINKSYMVFIFVLINTIFENNEFNLGVIAGTIGGIINYFI GVIISCFVVQSLVSVVKFGNTGKSSLENSVGNFFGPMIETMFWVYLLEMFTNLLLVNFPV QARIFVVVLIQILLSSIYEQIYLNGRSGVNAIIESVNFVKNNPLHYGLYSLIFIGVEFYL SLKFAIGQPMGREKIIACLIIALVHTGFMLFRGILFKHLNKHSYRQRKFMGWC >gi|229269867|gb|GG666044.1| GENE 3 1895 - 3592 1941 565 aa, chain - ## HITS:1 COG:CAC1041 KEGG:ns NR:ns ## COG: CAC1041 COG0018 # Protein_GI_number: 15894328 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 3 565 2 563 563 541 47.0 1e-153 MKDYKEIIAKKLDSQGIGISSEDIYQLIEIPPQENMGDYSFPCFQLAKTLRKNPAQIAAE LASTLVIDDFSEIKNVGPYINFFLDRKKFENDVINAIIDKKENYGKSDMGKGKTAIVEFS SVNIAKPFHIGHIRSTVIGDALRNIHEFLGYNTIATNYIGDYGTQFGTMIAAYKLWGDDE KLNANPIKELLNLYVRYNTEASENEEMMEVARKEFKNLEEGEEEATRLWSWFKEISFNEF DRVYKLLDIEFDNYKGEAYYSKYMPEILEELKEKKLLVESDGAQIIDLAQFDLPPSIIIK SNGSSAYITRDIATAINRKKEYNFDENLYVVATQQNLHFQQLWRILELMGYDLYKGCKHI SFGMVSLKDQTLSTRKGQVVFLEDVLNKAIEKTREIMENREDTVDDIGEVSRIVGIGAVK FQELYNNRIKDYVFDWDEVLNFDGETGPYVQYTYARAKSVLRKAGLGEIKPLAIEKITSD EEFSLVKKLAGFEDVVVKAKEKYEPSLVTRHLTDIAKSFNKFYNSSKIMVEDEKLKEERL ALAYATSVVIKTGLGLLGIKTVEKM >gi|229269867|gb|GG666044.1| GENE 4 3602 - 5947 2379 781 aa, chain - ## HITS:1 COG:CAC2340 KEGG:ns NR:ns ## COG: CAC2340 COG1193 # Protein_GI_number: 15895607 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 1 780 1 787 788 507 40.0 1e-143 MQAKSLEVLEYNKILEKLSKMARSSLVKKQILDLKPSTDVGYLEDELEKTGAMAKVIARN GNIDIFGLYDFKEIVGYIRRNGILEPSDLLKILGLLRVSEYLKDYSKNIDDSYIADLFDR ITTNDFLKEEIDRSILNEEDIADNASRELLAIRRSLRRKEEEIKNKLNSYVTSSKYEDAL QDKVVSVRDGRYVVPIKTNKRSVINGIVHDKSASGNTLFIEPSAIVELNNQYKDLELKED AEIRRILDRLSRLAQKFDVEILENQKIIARIDFLQAKAKFGLENDYSLPKLNQQKIINIK SAIHPLLPGKVVPIDVAIGGDYTTLIITGPNTGGKTVSLKTVGLITLMAQTALFIPADEG STVNVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDILNRVTSNSLVLLDEIGSGTDPIEG AALAISILSHLTEKEVMTFATTHYSELKYYAMENNRVMNASVEFNVNTLSPTYKLEIGTP GKSNAFEISKRLGLSEEILKKAKDLISDDTKNFNKILEQIEDDKYQMEAKNKEIEAYRRE IQSIKDKLRNKSKEIDEAKAEIIKKAEERANEILDKANKESQAMLKEAKRSKNANTRDID RSLNKIRNKFKDSYIEREEDRFGQTRAKDAPDELKVGDMIIVAGLNEKAEVIEGPDSKGN IKVQMGILKMDSNIKNVKKIEGVNQTEKNIKKVYSVKKAMNISASLDLRGQRYDEAMRNL DKYLDDAMLAGLDQAKIIHGKGTGALIKGVSENLKTDKRVKSYRFGDDEEGGYGVTIVKF S >gi|229269867|gb|GG666044.1| GENE 5 5947 - 8157 1934 736 aa, chain - ## HITS:1 COG:MA0538 KEGG:ns NR:ns ## COG: MA0538 COG0826 # Protein_GI_number: 20089427 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Methanosarcina acetivorans str.C2A # 4 646 6 733 855 291 31.0 3e-78 MNNPEILAPVGNMDMLYAGIAAGADAFYLALDDFGARAYAENFTLDNIEEVIAYIHYFDR KVFITMNTLIKDSEIDKAISYLERLYKYGVDGILIQDMGFYSIVKDQMPGLDFHASTQMA VRDYHGAKALMDLGFKRIVIARETPIEEIRKIAKFPCEKEVFVHGSLCVSYSGECLMSSY FGGRSANRGRCAGPCRQKYQLINDGKIYGDDYYLNMKDLNVIDNLDELINLGIDCLKIEG RMKSAEYVYNSVVAYKKKVNANFYDREKLRDISNRGYTKGFIFGQKRDYIIKEGDTKHRT VGIVELIDNKKAFRANSDLHKGDNLEVITDRCKKLPLTLTKDFKKGELIFLDKYRDAKIN SQILMLNAENIKDDLENGLASYKSLPVNLYFEGRIWQKPRLKITYKDIEASAYDENPIEP ALKVSLDELSIRDNLDRFKDEIFKPVDIEIKIDEGIFLSKKTINKLRRDAINLLKEKIAG KYKRKPVKIVKPKLADPSAKSSEKNIELMTNNINPDLLRGFDKVYIKDYDIKYRGFDLYL NLDSHMDYEIKDLIAYLKINEIKGVIFNNYRDLDFIDDFKNAGIKIRIGRYLNVMNSYAF DFYSTFAEKIESSVENTLENINENSDRYEVEALSFGRIELMNMVHCPFSTIKNCGLKGCE TCKFRESEFVSVNGDRMKLVRRNSLTKIYPAYPAGFDEKLFNENVSRLVSVFSDEDLRIY QKKSYKDKLNYERGVI >gi|229269867|gb|GG666044.1| GENE 6 8150 - 8647 498 165 aa, chain - ## HITS:1 COG:no KEGG:Apre_1338 NR:ns ## KEGG: Apre_1338 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 163 1 163 163 83 40.0 3e-15 MSEIRLEVKIDGVKYPLVSKESKESIEKIAAYVDGKIKDVKSDKLTFDRQLILASLNIAD EYFKDKESFKEYCEENKEAIEAYPAVKNELETFKSEYGTYKEDLEDKKAELKDLKILLQE KDAEILNLSKAENDANKLREKIKALQKQVMDLTKENEILKGKIDE >gi|229269867|gb|GG666044.1| GENE 7 8657 - 11044 2818 795 aa, chain - ## HITS:1 COG:CAC2356_2 KEGG:ns NR:ns ## COG: CAC2356_2 COG0072 # Protein_GI_number: 15895623 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Clostridium acetobutylicum # 150 787 8 646 654 451 39.0 1e-126 MLVPLIWQKEYIDIDKDLKTITDRLSETGSHVEEVEIHTSGLEGIVVGHVLEQKDHPDAD RLRVLTIDVGKDAPITIITNAKNTKEGDYLPVITSGTKLDNGMVIEDHDFFGIISQGMLT AYSELGYDDSVIPKELREGVIVLAGEFKPGTPASEVLFSNTPVIEYEITPNRSDCLSIMG MARETAASFGEKITYPSLAYKDNGEDIKAYANGISIESDSCLRYTARVVKNVKIGKSPQW LQNCLMLAGIRPINNIVDITNFVMLETGQPLHAYDLDKLADKKIIVRDAKEGEVIKTLDD TERKLTPSMLVIADGKEAIGIAGIMGGFDSEITDETTNILLEAASFDADNIRDTSKKLNL RSEASSRFEKGVAIEMADVASKRVMKLIEDLKIGEIVGNSYDEGQKETNNPIVKLRISRL NMLTGVDFTKEEAIRNLELLEFEVTDIDEDTLEVKAPYFRNDIGIEADLIEEVVRLYGMG KIESKPLVSSLKKGERSPLRLLKDDLKAKLVGQKFSELATYSFISPREYDRLGIAKDSKL RDYISLINPLGEDFSVMRTTQIANMLDVIAKNIKYGQKDMRFFELDRTFEKTTDQLPKEN LTLTMGLYGDYSFYDMKDFFTEAMRNTGFTGFSYKANENLYAFHAGRCADIYFAGEKIGV IGEISYEVREEYNINKGAIILEINLSKIAEFRITDKKYKQIPKFPAIERDYSFVADRDLE SAFIEEIIKAKAGDLLYKIELFDIYTGKGIACDQKSLSYRVWYRKADRTLKEEDIKGVEA SILEELKAKNIVLRG >gi|229269867|gb|GG666044.1| GENE 8 11053 - 12075 1233 340 aa, chain - ## HITS:1 COG:CAC2357 KEGG:ns NR:ns ## COG: CAC2357 COG0016 # Protein_GI_number: 15895624 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Clostridium acetobutylicum # 1 340 1 339 339 357 50.0 2e-98 MEENLKLALETAKSEIEKANSLEVLEDLRIKFLGKKGTITDLKKSIANLPNEEKPSAGKL INQTSKEIESLLADKNENIKKELLKEKIKEEKIDVTAHFDKYDSGHLAVINQTMEELETI FQNMGFDVVAGPEVDTVKYVFDDLNSPKNHPARSTSDTFYINDEVLLRPHTSSMQIRVMN EGKLPIKMVSAGRVFRNDEVDSTHSPMFHQLECLVVDENVSIANLKATLETFIKEMFGDK MSLRYRPHHFPFTEPSLEVDVTCPVCMGEGCPACGNTGWSMELLGGGMVHPNVLEACGID SEKYTGFAFGLGVDRIAMVKYGLDDIRLLYDNDKRFIEQF >gi|229269867|gb|GG666044.1| GENE 9 12303 - 13022 583 239 aa, chain - ## HITS:1 COG:CAC2358 KEGG:ns NR:ns ## COG: CAC2358 COG0566 # Protein_GI_number: 15895625 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Clostridium acetobutylicum # 2 235 4 253 261 144 37.0 2e-34 MIIESVSNQNFKFLNKLKMKKYRDKENSFIIESKKLVDEAIASSAKVDFIFLKEGVSYET SHKTLIFCESLFTKISSMTSPDGIGAVIKKKDPVEISSSKILLLDGTNDPGNLGTMIRSA EAFGFKDVILMPGTADVYNEKTLRASMGSIFRLNILNKTYDDIKKLKSCYRILSADMDGL DIRNYKKDSKIIIAIGNEANGLSQEMREITDEFIKIPMEGEIESLNAAIAASIIMNRLM >gi|229269867|gb|GG666044.1| GENE 10 13022 - 13375 580 117 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485252|ref|ZP_03915568.1| ribosomal protein L20 [Anaerococcus lactolyticus ATCC 51172] # 1 117 1 117 117 228 100 4e-58 MARIKRAVNAKKRHKKVLKQAKGYYGSKSLLFRTANQAVMKSLSYAYIGRKHRKRDFRKL WIARINAAARLNGTSYSKLMGGLKKANIDINRKMLAELAVNSPEEFAKLVEAAKKEA >gi|229269867|gb|GG666044.1| GENE 11 13386 - 13607 364 73 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485253|ref|ZP_03915569.1| ribosomal protein L35 [Anaerococcus lactolyticus ATCC 51172] # 1 73 1 73 73 144 100 5e-33 MMKKENKMAKNKIKTKRAAAKRFKVTGSGKIMRRKAYKGHLTAKKSPNRKRRLRKPAEVS QTVYKNVKKLIGA >gi|229269867|gb|GG666044.1| GENE 12 13588 - 14145 370 185 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167856598|ref|ZP_02479300.1| 50S ribosomal protein L35 [Haemophilus parasuis 29755] # 27 179 3 156 159 147 47 1e-33 MPAFFIQYIGGITIKDLRINDEIRASQVRLIDEQGNQVGITSLKEAQDMADDRNLDLVLM SPNAKPPVTRIMDYGKFKYDQEKKEKENKKKQKNAQLKETRFSLNIEDNDLQTKANQTKK FLNNGDKVKVSIRFRGRELGRKEPGYELMDKFNGMLDGCGKIEKKPKMEGRSLVMFLEPN DEKGE >gi|229269867|gb|GG666044.1| GENE 13 14310 - 15164 1111 284 aa, chain - ## HITS:1 COG:CAC1624 KEGG:ns NR:ns ## COG: CAC1624 COG1307 # Protein_GI_number: 15894902 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 281 1 278 280 158 36.0 9e-39 MEKIAILVDSGSDLSLDYIGKEGFYYLPLYVNLDGKFLKDRIDISPEDFYEWIKTNNKLP KTSMPSPGDINELLEKIRDDGYDRVICINIGSKFSGTYNACKLAEVEGIEVYAFNTGNLT LAQGFFATYAKKLIDDGFAFEEITKKLEEKIEDSKVFFTIATFKYIVEGGRVPKTFGKIG DALSVKPIIKTVPPEGGFAIEKIVRGEKKTLSQLEKIIRKKLEGVKDYYFFISEGDYKEG HEKLKESLKDIIENAQIYREGQISPTLGANTGPGLVGVGFFILD >gi|229269867|gb|GG666044.1| GENE 14 15152 - 15676 426 174 aa, chain - ## HITS:1 COG:no KEGG:EF1190 NR:ns ## KEGG: EF1190 # Name: not_defined # Def: hypothetical protein # Organism: E.faecalis # Pathway: not_defined # 7 171 14 180 189 84 31.0 2e-15 MIRKINELENISLPSWDKLPDEGIYKEELLTYLKDVLKPLYVVDENVISPSMVNNYVKLG YIEKPKNKKYFRPAIAQLIVISIFKQVITIEDVAKGIDIEMSTFGLQDVYENFERIFNQA RKDILTSDENLNINISYNFSDHHDKVLSYLSISLFTKLYTQLVIDDHKEMLWKR >gi|229269867|gb|GG666044.1| GENE 15 15717 - 16463 676 248 aa, chain - ## HITS:1 COG:no KEGG:Apre_1347 NR:ns ## KEGG: Apre_1347 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 245 1 247 250 131 36.0 3e-29 MSEKVFVNYIYDSCYSLSYGDYFLVFDYAKGLLEIPESKHIIFFATDKGGNSYTEEILNL SKLKSIAYILNKNVSNLAYQDNIIYLNKDELGMKDLKNLYKKENVYLLGENDFLRLNFGI DDFLVRTFSVDGDRLGFFIEIDSLLIFYGGSMDFNKIYGDRYLDLLDEVEIENPDIIFLP ITDLTKESLSYLEEILDVANSQIFFPTRIGSREEKSLEFKNYYKSKATDIRAIDKANETL EIELNSDD >gi|229269867|gb|GG666044.1| GENE 16 16539 - 17018 725 159 aa, chain + ## HITS:1 COG:BS_yjdI KEGG:ns NR:ns ## COG: BS_yjdI COG2606 # Protein_GI_number: 16078271 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 2 158 3 159 159 118 38.0 4e-27 MKKEIKTNAMRFLDTLNIEYEHVDYGLDHEFVSAVDLANEGHTDIHTIFKTLATESKDGD VYILVINGEDEIDFKKAAKAIGVKSLSMLALKDLRKTVGYERGATTPLALKKDFPVFIDE KAKDMDYIKVSAGKVGHSLKIKPADLQKATKATFADLIK >gi|229269867|gb|GG666044.1| GENE 17 17015 - 17695 612 226 aa, chain + ## HITS:1 COG:no KEGG:Apre_1349 NR:ns ## KEGG: Apre_1349 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 221 1 219 223 165 47.0 2e-39 MILTKFEKGKKTSFEISDGYDFKKISESESQIEDVFSLSLTNDVDDEKLRLLVILSPIFI AAFDNGSYELEFLKKTIENSAYPYGLYPNFFENFDKIQYLKAYEDSNKQIVTEDIRLRED NTIDFYFNPIKDSYLKSLVVMVDSLIEDDKNRKTLLKFFAKMRNDIVINGRRSILANGIQ AFYLNKYVVVWALELFDFIKENKTDTSKFLEPIYDLTNNLKTPRLA >gi|229269867|gb|GG666044.1| GENE 18 17739 - 19088 1690 449 aa, chain - ## HITS:1 COG:AF1145 KEGG:ns NR:ns ## COG: AF1145 COG0427 # Protein_GI_number: 11498745 # Func_class: C Energy production and conversion # Function: Acetyl-CoA hydrolase # Organism: Archaeoglobus fulgidus # 1 441 7 462 482 265 36.0 2e-70 MDFKKMYEEKLITVKEAAAMVKDGDWVEMGWCALTPVDFDKALADRVNELKDVKVRGGIL AYNSPTASADPTGEHITYHSWHSSGIERKLINSKDHNAFFIPIKYSELPRYIRENAPKAA VSVFQVSPMDKHGNFNFGVSVSHAMASFETADKVILEINENVPRALGGYDNFINIKDVDY VYQSTNYPMLTLPKASFGEEELKAASYVVDMLRDGDTIQIGIGGLPNAIGSEIAKSDLKD LGVHSEMYVDAFREMALAGRITGRKKNIDVGRQTYAFAAGSQELYDYIDDNEELMAAPVD YVNDIDVIASLDNFVSINTVLQVDLWGQISAESIGTKHISGAGGALDFVLGAYRSKGGRS IIALNSSRVDKDGKRISNIVPTFAPGTQATAVRSNTHYIATEQGIVNFKGLTTWQAAEAL VSLAHPDNRDELIKAAEEIGIWRNTNKRI >gi|229269867|gb|GG666044.1| GENE 19 19244 - 20425 2115 393 aa, chain - ## HITS:1 COG:CAC2873 KEGG:ns NR:ns ## COG: CAC2873 COG0183 # Protein_GI_number: 15896127 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Clostridium acetobutylicum # 3 393 2 391 392 475 65.0 1e-134 MTKKVVIASAARTPVGAYGGAFKTVSARELGAVAAKAAIERAGIKPEDIDESILGCVLQA GNGQNIARQIALDAGIPIEKPAMTLNIVCGSGLRSVSLAAQMILAGDCDVVLAGGTESMS NAPYLLTDERWGARMGDKKVVDEMIKDGLWDAFNNYHMGVTAENIAEKFGLTREEQDALA ADSQQKAAKARAEGRFKDEIVPVEVKGRKGKVTVVDTDEYIKEGVTKESISGLKPAFIKD GTVTAANASGINDGAACLVVMSEEKAKELGVKPLATIVSYATEGVDPKIMGTGPIPTVRK ALEKANLTLEDIDLIEANEAFAAQALSVIKELGLNTDIVNVNGGAIAIGHPVGASGARIL TTLLYEMQKRDSKKGIATLCIGGGMGTAVIVER >gi|229269867|gb|GG666044.1| GENE 20 20461 - 21303 1355 280 aa, chain - ## HITS:1 COG:CAC2708 KEGG:ns NR:ns ## COG: CAC2708 COG1250 # Protein_GI_number: 15895965 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Clostridium acetobutylicum # 2 280 3 282 282 342 64.0 4e-94 MKIGVIGSGIMGGGIVETAAKSYEVVVRDIKDEFLEKAKARIEKSYAKQVSKERMTEEAK EAALKNISYTTEVKDLADCDVVIEAATENPKLKKEIFKELDEVVKEGAILASNTSSLSIT DIAAVTKRPENVIGMHFFNPVPVMKLVEVIRGLHTSDETNKAIFELAEKLGKQPIEVKEG PGFVVNRLLIPMINEAVGVLADGLASVEDIDKGMQLGANHPMGPLALGDLIGLDTCLAIM EVLYTEFGDSKYRPCPLLRQMVRAGDLGRKTGKGFYDYSK >gi|229269867|gb|GG666044.1| GENE 21 21316 - 22095 1060 259 aa, chain - ## HITS:1 COG:FN1020 KEGG:ns NR:ns ## COG: FN1020 COG1024 # Protein_GI_number: 19704355 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Fusobacterium nucleatum # 6 259 4 258 258 284 60.0 1e-76 MTYKTVKYEVNGHIAKITINRPEALNALNSEVLDELNTLLDEVRANKDLRVAILTGEGRS FVAGADIKEMSTLTPVEAKEFGYKGLHVFRKLESLPIPVIAAINGFALGGGCEIAMSCDF RIASDKALFGQPEVGLGITPGFAGTQRLQRLVGPGYAKYLIYTAKNIKADKAYEIGLVQE VVEADKLDETVQKLAEKIANNAPVAVRASKEAINVGGQVDIDSAIKVEENLFALTFSTED QKSGMQAFINKGQAEFKNK >gi|229269867|gb|GG666044.1| GENE 22 22335 - 23336 1321 333 aa, chain - ## HITS:1 COG:CAC2709 KEGG:ns NR:ns ## COG: CAC2709 COG2025 # Protein_GI_number: 15895966 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, alpha subunit # Organism: Clostridium acetobutylicum # 2 330 4 333 336 289 46.0 5e-78 MSENKNLWVLVETKEDGSAVNVGLELLNPGRRMADVLGGNLVAVIIGKEVSKAKEEVKDH GVDAIITCEGDIYKEYNTDVYANAVCKLVEKHNPNTILIGATNQGRDLGPRVSSRLHTGL TADCTELDVDAETGNVQWTRPAFGGNLMAQILCPDSRPQMGTVRPGVFPKEAFGRKDNIE EIEDNIEYTGDIRTKIIDFIARDEGDDVDLVGAEFIVSGGRGLGDPSNLKLVEDLAEALG ATVGSSRPLVDSGWISHSHQVGQSGKTVAPKVYIAVGISGAIQHIAGINASDTIIAINKD PDAPIFDVADYGIVGDLFEIVPALTEKIKARKG >gi|229269867|gb|GG666044.1| GENE 23 23346 - 24155 1171 269 aa, chain - ## HITS:1 COG:mll5862 KEGG:ns NR:ns ## COG: mll5862 COG2086 # Protein_GI_number: 13474882 # Func_class: C Energy production and conversion # Function: Electron transfer flavoprotein, beta subunit # Organism: Mesorhizobium loti # 1 267 1 270 283 213 43.0 3e-55 MNIFVCAKQVPDTNEIKIDPVTNTLIRKGVPSILNTYDAFALEQALRIKDKDPEVKITVI SMGPPQADQMLRDCLAVGADNAYLVTDKKFGGSDTLATSYILSEAIKKVAETEGNPDMVF CGLQAIDGDTAQVGPELAEHLGLPQVTYAYTAELNEEGLKVLKEVEGGAQVIQSVLPALV TFTKYGDEELRYPKIKNKLKAKKASIGQITFEELKDSIDETAIGLKGSPTRVNKSYTPTV EKVGEIFENMEAGEAADKLIAALVDKKLI >gi|229269867|gb|GG666044.1| GENE 24 24174 - 25310 1501 378 aa, chain - ## HITS:1 COG:CAC2711 KEGG:ns NR:ns ## COG: CAC2711 COG1960 # Protein_GI_number: 15895968 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Clostridium acetobutylicum # 2 378 3 379 379 483 67.0 1e-136 MYKLTEEQLEMQKMFRDFAEKEVAPIAIEIDENHRFPEENVAKMQELGFFGIPFDEEYGG IGLDTLTYILCVEELSKACASTGVIVSAHTSLCADCINKFGNEEQKEKFLTPLASGEKLG AFALTEPDAGTDASGQKTVAVKDGDEYVLNGSKIFITNAGHADTYVVFAMTDKSQGTKGI SAFIVEKGTPGFNFGAKEDKMGIKASSTMELVFQDCRIPAANLLGEEGKGFKYAMQTLDG GRIGIAAQALGIAEGALNKAIKYVKERQQFGRPIAKFQNTQFKLAEMAIDIESARHLVYK AATLKDAGESYTVAAAEAKLKAARVAMDVTTKAVQLFGGYGYSKEYEVERMMRDAKITEI YEGTSEVMLMVVGGSLLR >gi|229269867|gb|GG666044.1| GENE 25 25705 - 27129 1734 474 aa, chain + ## HITS:1 COG:FN1536 KEGG:ns NR:ns ## COG: FN1536 COG0277 # Protein_GI_number: 19704868 # Func_class: C Energy production and conversion # Function: FAD/FMN-containing dehydrogenases # Organism: Fusobacterium nucleatum # 3 470 5 471 475 652 66.0 0 MTVYNKVNDEFINKLSESVEGKVFTADQINEDFSHDEMPIYGSYQPDVLVAAKSTEDVSK ILKLCNEYKIPVLARGAGSGLVGSGVAINGGVMIDMQGMNKILEYDLDNLVVRVQPGVYL HDLAEDCLTKGYMYPPDPGEKFATLGGNVSTNAGGMRAVKYGTTRDYVRAMEVVLPTGEI TRFGAVVSKTSTGYSLKDLMVGSEGTLGIITELTLKIVPQAKHTISLIVPFESLDECIAT VPVLFRANLKPQAIEFMERKIILASEKYIGKETFPKNIEGTDVNAYLLITFDGDNEDEID VLMEQAAELLVENGAIDVLVADTPSAIKDAWAARSSFLEAINSQYKLIDECDVVVPINKI APFINFVNEIGEKYDFDVQSFGHAGDGNLHIYTVSNDEDKLDEFNKQVHEFMEEIYAKAY EFGGQLSGEHGVGHGKLKYLKEYEGQLNTDLMRGIKKVFDPNMILNPGKVVSAE >gi|229269867|gb|GG666044.1| GENE 26 27199 - 28485 1430 428 aa, chain - ## HITS:1 COG:CAC2740 KEGG:ns NR:ns ## COG: CAC2740 COG0124 # Protein_GI_number: 15895997 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 4 421 5 423 430 368 47.0 1e-101 MKIVKPSTIAGVMELLPEDQLAFDRMKNIIEETFKKFQFLPIDTPVIEKNEILFAKGGGE TEKQIYEIASETRDMSLRFDLTVPLARYVAEHFADLNFPFKRYHIAKVYRGERNQKGRYR EFYQCDIDIIGHNSLAIANDAIPPRVIYEIFNKLDTPDVTFKINNRKLLNGFLNALDITD TTDVLRLIDKKDKIGMENTKNELLELVDNQKADKILAFIASDLKNEELLASLDDFVDNNL YREGLCELKTVYSYMIHLGIPDKNIKIDPSITRGLDYYTGTVYETFVNGYENIGSVSSGG RYEKLAENFSKQALPGVGMSIGLTRLFYQLKEIGLVNTNESRLTDILIIPMSDEENFYAI DILNKLHEEGKRADIYLEGGKLKKKFSYADKVGVKYAYIIGQSEREEGKVTIRNMQTGEQ ELVDFANL >gi|229269867|gb|GG666044.1| GENE 27 28561 - 29235 699 224 aa, chain - ## HITS:1 COG:no KEGG:Apre_1364 NR:ns ## KEGG: Apre_1364 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 224 1 224 224 270 61.0 3e-71 MLVISYKASEEFKNFLRANDYSFIQTIANPNLDPRICDHPDLSLFKLDNNTIVIDEGVFS YYEEKLPGYKLIRGARVGQNYPKDSLYNVVGFKDFYIHNDFTEKNIENFFRAKKISFLKV NQGYSRCSIIPLKNFLITSDFGIYKVLKDKVAIELVDEDYVYLDGFDKGFLGGTCGLVGN KLIFTGDISEHKAYQKIKDICQRENIEITYPKTALVDLGSVIEI >gi|229269867|gb|GG666044.1| GENE 28 29665 - 30996 767 443 aa, chain - ## HITS:1 COG:FN1469 KEGG:ns NR:ns ## COG: FN1469 COG0534 # Protein_GI_number: 19704801 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 13 431 13 432 440 228 35.0 2e-59 MKEKSLLKSYLKYLIPTITTMTLFSTYTMVDGIFVGRGVGSEGLAAVNISMPFVTLSFAF AILISIGSLNLIAHEKGRQNKEGADEFFSLGVAISVIFALGLSLVGFIFINPLVRFLGAE GHMVEMVKEYLSIIIFFLPFYLTSYVFEIMVKADGRPSLTTILMLMSALTNVVLDYIFIF KFHWGLWGAAVATGLAQTIPTIGYLIYFLSPKSYLKFRKFRIKDFMFKEIFSYGFPASLS ELSTGFCILVFNLAIGRLYGEVGLAAFSVIAYVMTFVVNTMLAINQSSQPLLGFYYGAKE YDKIPIIRKYMIRSVAVLSLLMVGAIEFWPEFFINIFLTDVSADFMIFASKSLRIFAISF LILGFNITNGGYLTSVGKPRFDFIITILRGYLFVTIFAYLVTIFMPKEMIWYVLIGSDFL TMVISIFLIKEELNELKKARQVH >gi|229269867|gb|GG666044.1| GENE 29 31104 - 33023 1157 639 aa, chain - ## HITS:1 COG:SP0913 KEGG:ns NR:ns ## COG: SP0913 COG0577 # Protein_GI_number: 15900794 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 2 638 3 660 662 249 29.0 1e-65 MKLTKRLALDGIRKNKEVYLPYILIYAFMVFSFSSILLLINADSLRQFYSMTSLRLVLEI AKYVMGIFSLIFLYYSDGYLLNKRLKEISLYAILGLDKKHLSKILALESLIISALGYLIG IISATVIYKLLETIFLKLMLMEGNFYLSFAKDAYIISFLVFAGISLLILLTRIIKIKRKS ILDLFKEEKTFKRPRGMVLSAFVSLILLGYGYYLAQTINNPLKALSYFFLAVVLVMIGTF FLFSSLSIVILKLMKASKSYYKTEKFISVSSLIFRLRSNAKGLASITIMSTAAIILLSSA IALYRSVEDVANRQYPRAVGLASVDEYSIDQVKKIIKENDLEAKNIQDYKAVFAFEKDGK NFNTSKESYVFDNANSLDDKAMGILVEVNDGSIPEALDLKDGEFLLYKNPKLADISDLEL NGKKLKKKADIKDYPYKNSGKNSLLSYMFDFYYLIVKKLDKNLSIDDNKIVHVYNFDLND EDMAIFREKTKDVQNEFGIGFHDYCVLEGYKLYGAIFFVGIFLGLIFMVATGLIIYYKQI QEGFADRNKYQSLRKLGIGEGKIKKTIDKQVLVFFFLPLIVAGIHVGFAFKMISKIFVML GCVNESIKITSFIIGFVMFALLYLIYYKLSSRQYYKIIS >gi|229269867|gb|GG666044.1| GENE 30 33010 - 33768 307 252 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 222 1 220 245 122 29 2e-26 MLEIKNLRKIYKENTANAVTALKDVNLKVQNGDFLAIMGESGSGKTTLLNIISLIDKETS GQILLDDKEILSLSDKEKSDFRRDNFGYIFQDFNLLDNFDVRENILLPLVLREENPEDFE DKLMPIVNKLGIAELLNKYPAEISGGQKQRVAVARALIIRPKIILADEPTGQLDSSSSED LLKYFEKINAEKNTILMVTHSNIAASFAKRVLFIRDGKIFNEIYKADDSRDQFYKRISDS LNFLRAAKNETH >gi|229269867|gb|GG666044.1| GENE 31 33849 - 34790 638 313 aa, chain - ## HITS:1 COG:SP1632 KEGG:ns NR:ns ## COG: SP1632 COG0642 # Protein_GI_number: 15901468 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Streptococcus pneumoniae TIGR4 # 104 310 112 319 324 162 43.0 8e-40 MLKLKNFLKENKVSFIFFFIISLTYLLVFISFNLEKFPIIYGFLISFFIFLAYFLYKYFN QTESTFVEISKNPSQREKIILDELENINKKYKDLLLAYNEIEGDLRDFYGLWIHEIKTPI AENKLILADNQPDLDLLKKNNKRIEDYLNILLGFIRYNSKTNDYIFKEVRIEPIVKEIIR EKSYDFISKKISLGVGDLGFMTVSDEKWLGFIIGQLLNNALKYTPEAGKIKVYFEKNFLI IEDNGIGIKTSDLPRIFEMGYTGENGRKLGSSTGLGLYLVKSIGKDLNLDIKIESEEGKF TKIMISFPKLTKL >gi|229269867|gb|GG666044.1| GENE 32 34777 - 35451 890 224 aa, chain - ## HITS:1 COG:SP1633 KEGG:ns NR:ns ## COG: SP1633 COG0745 # Protein_GI_number: 15901469 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Streptococcus pneumoniae TIGR4 # 1 220 1 220 225 228 50.0 8e-60 MFKIFVVDDSQIISEKLKNELEKWGFEVILAEDFERVFDTFKGEKPDLVVMDIGLPFYDG YFWTRKIRDISNVPIIFLSSKEDTMNKIMAMEMGADDFVSKPFEIDLLLAKIKAILRRAY DYKENLSRLEIRGLILDLKSMTVSVGENSLDLSKNEFKILETLMVNKGNVVSREKLMTSL WSTDIYIDDNTLTVNISRLRKSLAGLGIGDFIKTKQGYGYYVEA >gi|229269867|gb|GG666044.1| GENE 33 35517 - 37385 217 622 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 383 599 279 502 563 88 28 5e-16 MTNDYKMNDKSYRRKVSFSSIGRLLSYLFAYRWQMILIVVCVIVSALTQIWGVNMLQPII DSYILKSDVAGLKRASLQMGAIYAVSALTSFIYSRLMVRVGERSIRNIRIELFDKVQKMP IGFFDTNKHGEIMSRFTNDTDVLSQALANTVPTIVRAAIMLVGTILVMFKLSFNLTFTML IGLTILIPILSRIIYKSSTSFREGQGHISSLQGFSEETLSGQKVVKVFSREEKILDTFRN KTEEVRIAFTRANTYAGRMMPFLLNMVNILYAAITVYGVYITINGDMTVGVLAAFLSNIR QIQNPIVNVSQQANAVFQAMAGADRIFEIIDMPIEKDTGFIELVHAVENADGSVTECNDL TGSYAWMWDDGDRKHYKMLEGRLEFKHVDFSYDGKNQILKDISFYAEPGEKIAFVGSTGA GKTTITNVITRFYEIDNGSIMVDGIDIRDIKKDSLRRAFGMVLQEVNLFTDTIEGNIKYG RLRASDEEVKAAARLSGADSFIKRLPEKYDTEIKGDGSSLSDGQNQLISISRAAIAEPPM LILDEATSSIDTATEKDVTEAMDKLMTGSTSIVIAHRLSTIQNSDVIMVMEDGRIIERGN HDKLIKEKGTYWQLYTGKLELD >gi|229269867|gb|GG666044.1| GENE 34 37378 - 39141 1653 587 aa, chain - ## HITS:1 COG:CAC3414 KEGG:ns NR:ns ## COG: CAC3414 COG1132 # Protein_GI_number: 15896655 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 17 582 8 570 577 396 39.0 1e-110 MESIKEFYKSFTYIKRYLGEFKKNRNISRIYTSLETILELAIPAIMGMTLNEAVKGQDLG LAIKYGLLMVVLSLITMFCGMQATKNAGIASSGMGHNARLAQFENIQRFSFEDLDYFGVP SLLTRLSSDTQQLTFSMFVSTRFVIKTVAMAIVAFVLALKSSLKLSLIFLVAVPVLFALL MGLTTYAIPKFRKARFQYDKLNLVVEENLKNMRVIKAFFRKRYELDKFGIQNEKMFEYAD GSQGPMSLVFPLANVVLFATFVGITYFGGIEIIEGRLQVGDLVAFNMYATMLLGAFIGMS MVLTMFMSASPGITRVVEVISRVPSMDNDEKIEGLKLEDGSIDFDNVSFKYEEDSASYQL ENINLHIKSGEAIGILGPTGSSKSTLVQLIPRLYDISKGALKVGGHPVETYDLKTLRDDV AIVLQKNTLFSGSIADNLRWGDDEAAMEEIELAAKISQADDFVRNRHDGYESVLGQGGTG VSGGQKQRLTIARALLKKPKILIMDNSTSAVDTKTETAIIDGINKYNKDLTKIIISQRVS SFKYVDRIIVMNEGKIEAVGSHDELYATNRVYRETVDIQEQGGGDND >gi|229269867|gb|GG666044.1| GENE 35 39129 - 39575 494 148 aa, chain - ## HITS:1 COG:no KEGG:Apre_1367 NR:ns ## KEGG: Apre_1367 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: A.prevotii # Pathway: not_defined # 6 144 8 146 147 124 53.0 1e-27 MNYDPIFSIFSLLRCASGMSRERAKFYGLNDLETIILIHIGLLENPTQKSISEKLRAPKQ TINNVIKALEDDGLIELIQDESDKRIRILRLTTKGKKNRDEKLRPIIEANKKMYERLGDE KVKEISDALKILIDSIKEDFEKEDEWKV >gi|229269867|gb|GG666044.1| GENE 36 40008 - 46841 7904 2277 aa, chain - ## HITS:1 COG:no KEGG:FMG_0048 NR:ns ## KEGG: FMG_0048 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 2 1555 7 1534 2427 563 32.0 1e-158 MKVAKRILAFVTSLTIVASNITPVFAGKFESEYNDINKDKRYPLVDKRIINDLPNEEIYV LKEGDTITNPDEPSVYTYMWSYKRPVTGKLTNLEEMELASQPYVASVGENASDEEKAKVN YKVNPPTLKGYKKPDGEYIASYDFIRKNASKKEGLLHNSTTDINYEPTINNGIKVKHLFQ SLKDRDLYENLEGEKEIITIQKNAFGEFPKTGQRLKLDNLFNLKFGWPIDYSEMDFVKLK EKIKGFEPERNADNLEIIVPEATNSPFVIYYNRKSFQVKINTDGGTYIPDMTLFYGQTIP SVTEIPKKDGAVFDHWVADKDICIKDKSGEITTIPAKRPIDMTKYQEGFQNAMPAEDITF KAIYKENDKAEYSVEFWVEKADYDDKNPKLDLKDKYEFVGNRVLTGKTGTVPDIANISID GIAFPDLDKARLNKIYKDSAEFDKYFKYNKALTDSQNQDVSNEKVEDDSGESVYKKVSRT IDATGNTSYKIYFDRQVYTLYFSKLITENDSEGHFWPIITKDGEVYDSKKGNPYSFKARF NQNLQGLWPDPIENVKGYPEGYRSLGWVASTKNKAYSYRDTPPYRLTADDFLDSSDIKDK KKGGYSKTLPLGDNGERPLGEREMCFGIDSSNQSEPYQVEFIMETYPGFEVEGETVEKIR DYPLQYRKFDTPIADYDFTPPDIEGFEPKHKKTRIMYKKDKYDFNELNEEDSDRLEEFKT YLKFIGAPREDVKNYKNLYEKKYKIRFLGQFPEKVENDQEEENQEENNEENNQEGNQEDK NKEENNQEKENVQPIEFDENSYLVFEYLRKSYTINFNNDPRKVRDDTSYKDSEKVSVPYH HPLRWLDGVYNFDYEKSDEENKKAREEYDQEHIIDKKRVPEKPKWVPESWKFLGWSLNPE GTTLVKDGNYTMPAHNITLYAKWGCDTDSKVTFDLGLDAGETSKYMIKPMDLKSSKYEVG DDVRTSIKENKKYKLPIEDETSTSGKQVFIVENGLAIKAPSVPRRPGYDFMGWEHVIFKK DDEGNNTGEVDDSFKEKYGPARQYTFESEIYSDVYLKAIWAKNNLYDVKITDHILDKDLN EDKTETKINILENQREGTFAYYFAKLQGENRTLVPDKDLERAPEKVREAFIQYRDKIKEE SESPTDSSDITNEINTYYQNVKVDRVECPMAYNQLQFFYKPYRKREYKVNYLLVDNDADL KDTKKYPTVGKPNSNLTKQIIDQDEISNGNRHFDARNYRLIPGFKLVSKPQTQLVFTVNE ENNKLLSINGVDVGDNLENAQVNFYYKDIRLIKDKYDKPPKGYHRISFVAKDHGSFGKDE NGKEIKEVHYDVIDGLYFSKVHVPTNNGKKDKNDADLLADPGYQIGSWSQKDNPANGLLD PHTVITRDYTFEISFIDKKYPEIEPIKVFESSKNENGYINDFRPKKADYDKALAEFIKMD NYKSYEILDDEKAIYEKLKEDDVYNSKVSDPEPIKTSIKVKISFKDKTSKEFDIPVLVYK NIYRALDDKGKVNILKKDKFLEGFVKVTVDPTDKAVDKQTKTYYVNQKAYVKIPEANKPV GIKPYIFEKWTVMSNNKETDFDMTKHHKIASEIVIVAKYSTKSKPIPQGVSAETVVTYIG NNPELESYKQAIKAGKLADKKDFTEIEAYEITKEPDVSAEVLDPETKVTNNENKEVYKNY ATVKVIYKSGEIYYVDIPVKVLEKVKPVDSETDIPKGYEDYLLVTVDPTENATDRSKSYY RVRKNIEVTIPVNSPTGKEGYTFVKWDKDLTYSFNDNTTIKAIYSHQVPWTPIKPIPEAN GGVIETFRGVRPNIDDYRKNVKYTIEVNGEKVEKTLGAKDTLEFIGEVNPDNVDVSTLGD KKVPVKIALEDGTSVLTDLIVRVVDKVYPENTTDPIPEGYVNLYIIPTDDNQDKAQRAYK VHPNVDISISASGNQKADINLPEISPVSGKSFLRWTIQQGLNTNWKAFVDGNYQFNSETN YIVAKFVDNVVLGNPDETRPDVPADFVKVIVKRDKDTLKPKKTIYWVKKDTDVMINEVDE STAQDYVFDGWKYQDGDDENNLKEDANKNFKFSDQSGQVSHKFDKALTVITAKYSKFGVG PNVGGGPVGKGSDDENSGGDTSGGGTDPNPDGDKPSDNKGGDDTPSDDTGTPNPSDPDGG NPGDKPVDKPGDKTGDKPGENPKDKGNNPSQKGGNEIVEIQAKVDQTVKTVGNAAGKIAG SVSATVNSGVAGTKKALAKVLNPRTGIITNYEFYLGLMAASSVGLFFTREKKNKDEE >gi|229269867|gb|GG666044.1| GENE 37 47260 - 57828 11795 3522 aa, chain - ## HITS:1 COG:no KEGG:FMG_0048 NR:ns ## KEGG: FMG_0048 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 1878 237 2062 2427 2014 61.0 0 MQVPDDSKDFVLEYRYNRAHFDVNYDTAEGTPLPNRTLYYQQFIPKIDSIPTKLGSLFLG WKPSVDIKGTINDSEKTFKVGEIIKDSAGNALVDLNNTIYEKKSQDEFVLDSDKKQISKK SSDTVKLEMPASKVTFTAVWKDKEKADYAVQFWVEKSDHADNASIMNKYDYMSTRVYKDA DKGFTPNLDEEPVKGLKFPDLDQARLNKIWAGEKFNRNHNLYLNKFFVYNKDLTDEQNKD PNAPTMTKTVSPTGKTVYNIYYDRQVYDLYFTKSNAQPKKNTIYPEIWGWDPAKGEAVMK GGPGNPYHYKARFNEMMYKWPNDAKQTKGFTPGYQSFGWGPNYAEPNFPRHLDTPPYRLN AEEFLDMENYTKWGGYTKHIDKGDGTKIDLDRFDFTTLSFGIKQDHPSIPHHMDFWMDGF KDGETIIRYDLVRTKADTAEPGYGHKYPLVTGFTPYGYEPMKAWPVIKEGSEEDGRVDED RIGELNDERDEITQNNCGTYYNNNGIKLPIGQLDFIQHFFSDSDEWDDVKEGGQAFTENG YLQFHYKRNKYPLRFNYDPSITRDDSYFKPTNSLETFYEFPLKVLSPDLVDSNLDRDDKE YFKEDPKNLLDDPENLKKLGLTDLVFKDPKDGKLKVKRPDDLSDQMVFKGWALDPAGNKL IWENPKETMPTHPLNLYAKWGEPDYKWKVTFDPNGGNLRNIKEENLTTSRKKIQEGDIGQ EEINTYAKKEANDGDNQVFTVIQRQKLVEPKKPTRKGYDFMGWEVVHYKKNAKGDYTDEI DNSYRETYKVPELYSFGNDVVAPVYLKAIWVPNQRVDVAINHYYLDKDFKLDRKGEGTLE DQRSGYLVSATANNKNGQYILATNDELKKLPEKLKTEYEEYNGRVKLNNSYFQTFRVEPE KIPAPGKPSQMIDNPKAKDNNVFKFFYRPFRQREYKVNYIDERGKEKVENFLKDLKGLEL ISTEGLTGDELLEANKKNKEKLEAKKLELESIIKDYQIVKPEPVTNGNRYYDARNYRPIA GWKLTSDPQQQLFFDVDEETNELLGINGTRLDQIFFYYKDVRIIEVPKDDPVPDGYVRVT FKADKGGSFGKDDKGNDITELNYDVIKGLKSDHLPVPKELKDGETKEADKYYITPDSGKM FVKWDNKQLLNENTTIDKEDKDYYVFTAYFNWEDVVAKELVTTESFKDPNNTWTNDFAPT IEKLKEKIVYYKNGEKKALPEGTEIKLYDEAGNELTSDEQVFKLVEEAGNADAKEVVRKV TVKAKVKFKGNKKDMDLEIPIKVYKNVYEALNGNGDKPIYLSQAEEGDLKEITGNYVKVT VAPTGDMTAKDNKVYYVNPNAWVNIPKVNPDGSSTFINWTADIVKQNENKAENGKFDFEK RHMFTEETVISPRKSDDVVEQEKGKDKPDVPDTFVKVIVRTTDKATEVFERTFWVNPSKN VEIIVATPTGKANQEIDVPNAGKKKVTYKFKEWQKVKTGVDDNTLTAVNPPTKIDLAKNK YTDKVTVIEAAYDEEFGATKPADTTKLDTPEGKEITEDILKEKITPPTGKVIESITVISK PDGKTVGKSEAKVTIKYKDGSTEGTNDNPVIIPVEVHKNIIPANSDGSKPRDAMDNYVKV TFKPGEGGKFEQTLTGNFVYYVSPEVEVDLTDTAKAIKKTPNTGYIVNGENWTNEADKKL KGTFADKTEFVFNFDKSDDIVEKTKENQEKPAGYVTVTFRTAENGKLFGKADKKVYYVNP DANIKLKVLADGQTAGEKELAVPATIADKDYTFKEWVEDLDQNKPIKGDKEFVAKFEKKK VTLTYDLNGGTGIKPNDEKVTHGESTKLASASGITKADAKFIGWKVGERTYQPGETITLT KDEKAIAQWTNDENIISYDPKEPMTRPEGYVRVSFEAKEGLSLENVKYYYVKKNAKDASG HVLTLKAIKDNATKYGYPSVKEETGYKFDKWDKVDTTVIGDQDIVVTASAKTLPDFVEKT NQNPDKPDDKYVTVTFKADNSGNGTVTEKTYFVNPKKYVKLVPPADARGNTGYEFGTWSQ DATIPTQYNEDTEITASFNELKAVIPKVNDSTPKPAGYVAVNFEVGDGGQILKGETTTYY VKPNTDVTIPQPTTKANVGYEFEKWDKDTTTQKQYTEDTTVKGTFKKLPDYIPAKDKSGA ENQKPEGYIKVVFKADDNGKLKEGDKVFYVNPNVNIDKDFVKTLTNGIEKLPNPGYTADG GKWEDKSSFLSSFFTKDKLYVYKFKELDNLIPAKNTDGSLNDRPVGYHKVTFVPTDKATD ETNKEEVFYVKPNTNVTITPAQPSGKKEVVDGLETQYTFTGWKLNSTSWGKDADVSGVFA DGTQIFAQYTEKNVTANVIPQTGDKKPDGVPSWYVKVVVDTDKYATESFKKTFWVTNKEE VTIPVTEPEGKKVTFGKNEYQISFEKWAVTSPKTNTDEWKTGKPIRAKFTVDTEIKAKYS YKLTEIKGYKIEVEETKAFESFKDGETLVNNFLPTEDDLKGKIKVAGEKLDPTKIEFGKG NLDNWNKFTNLKDALYDKLKEDGSPVGDSGPKELKIKAKLSLEDGSKVIVDVPIKLYKNI YRGLNNGDKPNIVNNDDYLKEFVKVTLVPTNLAKDSQEKVYYVNPNAKVAIPEKDPTPAD NKYTFVKWYYLDAQNEKVEIKPGDRNNFTKETKIFASYSKDIGVITPLEPTVNTIIKNIG DSLSDIDYKKAITPPEGKTVDSVVIIEQDPDKRVNTNKAGSFTEKVKVHYTDGSSYVVDV PVIVSKDYVEKIDEKTTKPTGFVEVVVDSTDKAKLGANDKQVKTFYVNPKKKVSLPVAKP SGAKVKGSDITYEFEYWKVEDGSKQYQDGISDIFTAAKTTIKAKFKLNQQPLTPAIKAGE KIIPKDSVPNPRDFINNIYKDEDPSSKENLPPGTKIEFDGDGRPDTSTTGETKAKLKITY PNGKTTTVTVNVTVVENIVPQKEGEDKPKVPENYVEVVIDRTDNAVLVDGAGNKIPKTET YWVNPEKDVTITVENPTGKAINDKGDKYNFSHWDRPLSGRFVVKTIIKAQYDTYIKPEPK RDANTIVTYEGSTLTYDDYKNSITVLTITKKNEAGGEEKEEITPDKFEVTGVEGGPTAET KVPAGQTSTIVNAKVKIKLTDGREYEVKVPVKIYKNLIPVDPKSTDKVDAPEDYKKVIVD PTENAENPEIKVYYVNPKVNVTIPEMNVTPKDGGFLKGWTASDEAESPFGPRQFTNNVTT IKASYYPSVIRQVDKTTEIARPNTYVKVVVKREDDVYNKESIYWVNPKADVFLPETDGAS RKDYMFVGWKYEEGTDNQLTEVPDKDFSFFKDDKQVGHTFSKKVTVISAKYVRCDVCIIP PGPTPGPTPGGDGDNPGVVTPNPENPDGGNPGDKPGDKPGDKPEDKDNPDNKDNPKDKDN PNNKDNPKDKGKNPNQKGGNEIVEIQAKIDQTVKTVGNAAGKIAGSVSATVNSGVAGTKK ALAKVLNPHTGIITSYELYLGLMAASSVGLFFTRDKKNKDEE >gi|229269867|gb|GG666044.1| GENE 38 58116 - 58595 484 159 aa, chain - ## HITS:1 COG:no KEGG:FMG_0048 NR:ns ## KEGG: FMG_0048 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 150 17 167 2427 105 40.0 5e-22 MALVIATTMMASNIAPAFASGLTHNSSQAEIVNNTNNNSLPVVPAKTDNAGDFVKKTALP KIYTLRTDYMVKRGQSDEINYQPYIASVGEKASPEEQAKVNKTIDLPNFPGYKKPQDDFT YTYDHIKDLAKGGTKSGDADTGIRYEAEKNITTHLYLTR >gi|229269867|gb|GG666044.1| GENE 39 58836 - 59741 985 301 aa, chain + ## HITS:1 COG:BS_yojN KEGG:ns NR:ns ## COG: BS_yojN COG0714 # Protein_GI_number: 16078999 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus subtilis # 23 288 23 301 304 128 35.0 1e-29 MIKYLKEQGIDERLIAQLEKYRQENGLDNNDRIIKPEYKYYGKDVLEQAIAALLAGKNIL LTGAKATGKNVLASNLSYLFKRPTYNVSFHVNTDFASLIGADTFKNGEVTFRKGPIYEAA IKGGFAILDEINMAKNEAISVLHASLDHRRIIDISGFDKISLDPNTRFIGTMNYGYVGTR ELNEALASRFMIINVPNITKANLDLLLRDNFPSLKEKYRLALIDMFISLQLKSENNEIST KAVDLRGLIGAIETMKIGLNPFDAIKMGLVNKSFDKFERDLVLDLIKTKIPEKIDESVFD E >gi|229269867|gb|GG666044.1| GENE 40 59734 - 61464 1545 576 aa, chain + ## HITS:1 COG:no KEGG:Apre_1369 NR:ns ## KEGG: Apre_1369 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 575 2 577 577 623 59.0 1e-177 MSENFDKIRQYNIIWDFAEKYDFLPQKSYPMDEVYKNMTRGFIIKTFDFKVLDSYFDYLR AESPFFSEFSFITNLLMEDIAYKSLAKNNLVIESLRKDFARKALRKYNFHEADNLNEQIE KAYYGKILDKPITEGPFFRTIYRDIFKIYELDTARLIEKLNEVFKTYFRFEKSKENESLL KEMIKDKKPKDFKNNKKDAKDFDFSDDFIKDQFNIGSAEFTGNIYLEEKNKDMDRHLILL NLDKEGYHGSDEFIEDFYGKSVFPEMRVRSLEKKLATGVHAGKFLYFTKGVYTDSPNAKF YKKNRDEVFSKNKDYIEKNLAINNRSIKELAQTIKNSIANYEDFADVSKAYGIVDSTKAW KASVLKDFNIFDNVENDDVSTFKVDLLLDSSASQRNRQEVIANQAYIIENAMDEVGIPIR VMSFSTLRDHTVFNLFRDYNEKHNNKEIFKYFASGSNRDGLAFKVLNELIDKTKDNEKHI VIILSDGRPNDEKANINTVKLLEKEQYVGDVAVYDTAKEIRNIKNEEVSVLGVFTGEDED IENGKLIYGTDFCRITSLENFSKIVSIFMKNTIMKI >gi|229269867|gb|GG666044.1| GENE 41 61507 - 63078 1775 523 aa, chain - ## HITS:1 COG:CAC3047 KEGG:ns NR:ns ## COG: CAC3047 COG0728 # Protein_GI_number: 15896298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Clostridium acetobutylicum # 3 461 11 468 520 161 23.0 4e-39 MGQTTFMLMIITIISKVFGFAREAVMASYIGAGDLKSVYTTANTLPVVVSNFVAMGIISG FIPIYNKAKNEEGIEAAEEFTSNVFNILMRFALFAVIFGIIFARPFSKILSPDLEGKWLD LATNFTRIMMFAVFAYLYSAIFRGYLNLKGNFFDPAITGILMNIVIIIFTVLTGITGNSY LLIVGALLGNVLQYILFPKAVRQAGFEHKKIIDIHNKYVKNLMIVAVPIIISSAAGELSI IADNSMASYFFGKAAISKLFYSKTMLTLITGVITVSVTTAIFPKIASLGQSGQIKEMKAS ISSAVVTTMSLVIPATIGMTVLSAPIIELIFQRNAFTSDDTIIVASLLSAYAPYIIFQSL SDVVDRGFYAVGDSKTPVIIVVIQQVLNVILNFVLIKIFDIQGLAYATVVSTALGSMMML YKFRANFGSFNLRQTLLSLGKIIVATGLMAYLANLTYTMLAGKISHLLAIFGAILVAGFV YLVVILLVRIPEVMDLVNQFYHKFFEKNQDPKRVARRKRKNRY >gi|229269867|gb|GG666044.1| GENE 42 63145 - 64803 221 552 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 341 546 3 212 245 89 29 2e-16 MKNRRSGFAIMKNMIGLVGELKPVMVLAIFIGSLGHLCASFVTILAGYGILSNYANDGKT LLIIKIMIALAVLRGIFHYIEQYANHYLAFKILAKIRHLVFKKMRSLAPAKLAGKDKGNL ISLITSDIELLEVFYAHTISPIGIAITYLVFMEIFMGSFSIYQAILAFFAYASLGILAPL IISRKNSSLGLDLRNKTGDLNSFVLETIRNMEEVKQFDLRERQVFILRKKSRKLRATANN LDQIKAGSEVLIGGLILGFSFAMLFLSLMLYQNNIIDLRGFIIPTIAMFSSFGPFVALSN LGNILSHTLASGDRVLDLLEEDPMVEEVLGDDEKEAFESAKISNISFAYGEEKILEDFSL EINKGKIFGLYGKSGSGKSTLLRLLMRFWDVDQGAITINNENIKEIPSKRLRKMQSLLAQ DTYIFNTSLKDNIRLAKLDASDEEIIKAAKKASIHDFISSLADGYETRAGELGSTLSAGE RQRIGIARAFLHDSDLMLFDEPTSNLDILNEASILKSIKEEAEDKTVLLVSHSLSSLSIA DEKILVKGRKNS >gi|229269867|gb|GG666044.1| GENE 43 64793 - 66535 1522 580 aa, chain - ## HITS:1 COG:HI0663m KEGG:ns NR:ns ## COG: HI0663m COG4988 # Protein_GI_number: 16273636 # Func_class: C Energy production and conversion; O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components # Organism: Haemophilus influenzae # 1 569 2 572 581 416 41.0 1e-116 MVNKKLVAILQGSKKYLYLNLFFRYLALFMQIGIVCIFGEVISKVFGQKIGEISLVRIVI YGLLFLSIKLFCQYMVTRISFSSTKFIKEKMRRIIFAKLMDDRIGFEEKLPTSAILQLAV EGVDQLEIYFTSYLPQLYYSLTSALILFALIAYISINAAITLLICLPLIPVSIILIQKIA KKLLGSYWTSYMSLADIFLENLEGLNELKSYGADSYRQDLMDSFAEKFRKATMRVLVMQL NSTSVMDIIAYGGAAAGIGVALMEFSQRDINIFGLVFISLLAAEFFLPLRLLGSYFHIAM NGIAASNKLMVLIDSYDRNLGGETLGGENIQINFDQLGFSYDGDRQILDGIDLEIKTGNL ISLVGLSGSGKSTIAKLIKNPGLTYEGKILINGLEKNTYDPVSLNKNIINVDFDGRLFKG SLRENLKIAGKDITDEKMLDALKKVNLYDFFMGEDGLDTEILENASNISGGQRQRLVLAR AFLFDGLLYIFDEATSNIDGPNEAQIMEIIQKLAKEKAVLIISHKLINLVNSDRIYFLEN GKIQDSGSHAYLYEKCEAYKNIFDKQEELCSYAKGVGYEK >gi|229269867|gb|GG666044.1| GENE 44 66697 - 68223 1919 508 aa, chain - ## HITS:1 COG:CAC3230 KEGG:ns NR:ns ## COG: CAC3230 COG4624 # Protein_GI_number: 15896476 # Func_class: R General function prediction only # Function: Iron only hydrogenase large subunit, C-terminal domain # Organism: Clostridium acetobutylicum # 128 492 49 419 450 193 36.0 8e-49 MKESYIDILNIRRMAFEAIAKIAYENRPLTDIGNEVYNILPGEEASYRENIFRERAVMGE RLRMCIGLDARTADKTEAITAGLADMDVDRRIYHPPLVSVIKIACEACPENKVTVTDQCH ACIGHPCVNVCPKNAVSYSSKGAKIDQDKCIKCGKCVEACPYNAINHQKRPCAESCGVKA IKSDELGRASIDENKCVACGRCIITCPFGAISDKGEIYQLIKSLQSDRKVYAIVAPSFVG QFGANVSPKQIREAVKMLGFDDMIEVGLGADLTTMNEAHEFLESVPTGKIPFMGTSCCFS WKLMVRKNFPDINDKISESSTPMIYSGKQMKKRDPNCEVVFIGPCISKKLEALEPEVAEV IDFVITYEELLGMLLAKGIEPAEIEVEDDIMDASQTGRYYAVSGGVAQAVEKRIHEIDPD AVVNMENAEGLADCVKLARMAKLGKMNGKLIEGMACMGGCVGGPGTVVDIKKSGKAVKDF SAASVFKSPADNTNIPVEDRPNDSVLQK >gi|229269867|gb|GG666044.1| GENE 45 68252 - 68560 513 102 aa, chain - ## HITS:1 COG:no KEGG:Apre_1372 NR:ns ## KEGG: Apre_1372 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 90 1 90 93 117 64.0 1e-25 MKVTICSCARCTAHGNEYLHDSAELVKKDVEIAYEVDNLGQAPEIEIVYKNVMDEVENSQ RLSPIVKIDEEYITKAKPEVLMEKMYAELKIERDKRKSEINK >gi|229269867|gb|GG666044.1| GENE 46 68625 - 69938 1397 437 aa, chain - ## HITS:1 COG:BH1581 KEGG:ns NR:ns ## COG: BH1581 COG0642 # Protein_GI_number: 15614144 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 94 432 241 588 594 169 30.0 1e-41 MKKLTKKSLIITTTIATVLAVVVSFYTNQYKLCLLFWAILMILLASSHFYIDKRLDTYAK EISKFDKYYDFNHIGEDFEDVGKIYGKLLNKNIKLEKNISILKRQIKELKNITSNMEEGF IVFDPKGGVELMNDSAKFFLNKDEKVRLDKLIDDKEYKLALREARILSRSKSLALDVNSY HLKIFIDPIYEDGNMGFVVIIIDYSETRKAELMRREFSANVTHELKSPLTSINGYAELIA TGIAKKEDVKKFAQIIFDEGNRLLEIIDDILRLSKLDEKGLDIEKSYVDIKEEMDIIIDK FRQNSDKKNIKVENNLTSYRIHTVKSLFVDLLSNIYENAIKYNKEGGSIEISSILIDRSL RIFIKDTGIGIASYDIKRVFERFFVVDKSRDRKLKSTGLGLSIVKHIADTLGFKLDIESK LGEGSTFIIEIPVKEYL >gi|229269867|gb|GG666044.1| GENE 47 69935 - 70594 619 219 aa, chain - ## HITS:1 COG:L0125 KEGG:ns NR:ns ## COG: L0125 COG0745 # Protein_GI_number: 15672379 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 2 214 4 226 233 188 45.0 6e-48 MIYVVEDDGAIRNLVSYALTEKGYQVKSFEDGRSIVKEIRENPCELLLLDLMLPEKDGVT ILKELREFSDIPVIILTAKTDEFDKVLGLESGADDYITKPFSILELLSRVKAILRRVNKA DCDHLTYKNLSINTKKRTVKVNGEKIDLTYKEFEMLFLFMNNMGNVITREDFLLKIWGYD YQGETRTVDVHIASLRSKLKDAGSYISTVRNLGYKFGEI >gi|229269867|gb|GG666044.1| GENE 48 70594 - 71211 636 205 aa, chain - ## HITS:1 COG:MTH1734 KEGG:ns NR:ns ## COG: MTH1734 COG0704 # Protein_GI_number: 15679726 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Methanothermobacter thermautotrophicus # 2 200 7 208 219 63 30.0 3e-10 MRTRFNSDLGSIKDMTREVSQLILISYDRIDLYLDNKNDENLDHVIELYDDIRRAASGIE SFCFELLALQQPVAKDLRLLQMEIKLASTFKRIASHLNSAAEILKSYWLSEKEIDFLKNF IKNEKNMLEVGIGAFVSNNKDLALATIEKDQINNDLFMDAINFAADENKNDKISAVELSN KILLFKYFERLGDRLARVADLATRL >gi|229269867|gb|GG666044.1| GENE 49 71211 - 72074 312 287 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 41 282 2 239 245 124 33 5e-27 MEKVKDKGPLVDDIYKKAQQINKKNKSIIAQRNVEDKGTAILVKDLDLWYGDFKALKKIN MDIKKGKVTAFIGPSGCGKSTTLKCFNRMNDLVDSCRIEGLIEIDGADIYKKDVDLVSLR RNVGMVFQAPNPFSKSVYDNITYGPKLSGIKDKDTLDGIVENSLKAAAIWDEVKDKLDQN ALSFSGGQQQRICIARTLSVNPEIILMDEPTSALDPISTSAIEDLMDELKEKYTIVIVTH NMQQAARISDQTAFFLTGEVIEMDETKKIFEDPADKRTEDYITGRFG >gi|229269867|gb|GG666044.1| GENE 50 72083 - 72898 905 271 aa, chain - ## HITS:1 COG:SP2086 KEGG:ns NR:ns ## COG: SP2086 COG0581 # Protein_GI_number: 15901902 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 4 271 5 269 271 213 49.0 2e-55 MSKIYKALIIGLTFLGYAMAGIIISYILIKGIPNISPSLFEMKYTTDNVSLMPALITTLM TIGLTLIIALPVGIFTAIYLSNYAKNKFLIKSVRFSTEILSSIPSIVYGLFGYLFFVSGK GSGLGMKYSLLAGCLTVAIMVLPTIIRTTEEAILTVNPLQAHASLALGATKIQTIFKVII PDAMDGILGGIFLSTGRIVGESAALIFTMGSNTDIPKGLFKSARTMAVHMYVISSEGFHV KEAYATAVLLLVFVVVINFVSAKISKKIVKA >gi|229269867|gb|GG666044.1| GENE 51 72908 - 73771 794 287 aa, chain - ## HITS:1 COG:SP2085 KEGG:ns NR:ns ## COG: SP2085 COG0573 # Protein_GI_number: 15901901 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 5 283 7 284 287 255 53.0 9e-68 MGKIREKVGETIFLLSAVMSVFLILLIIYFIFSEGLKFVNEYGLLKFITGKVWKPTAGNP RFGIYPMIIGSLIVTSLSTIIALPFGLAISIFMAYYAKKTYKVLKALMNLMAAIPSVVYG FFAMMVLVPLIKDIFKAKSGMNMLSASILLAFMILPTMVNISENSLRQVPKTFMTGSLAL GATKEETIRRILVPYARSGIFSSIILAIGRAIGETMAVYLVIGNQPVMPSSILKGARTLT TNIVLEMGYASGTHRQALIATGMVLFIFILIINVGFNIIRSKSEERL >gi|229269867|gb|GG666044.1| GENE 52 73773 - 74714 1408 313 aa, chain - ## HITS:1 COG:SP2084 KEGG:ns NR:ns ## COG: SP2084 COG0226 # Protein_GI_number: 15901900 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 1 311 1 290 291 182 41.0 9e-46 MKITNKKILAATLSLGLILAGCGKDQKAEEKQGETQTEQAPAEKEESTETANQEDYDFTV VSREEGSGTRGAFIELVGLEEEVNGSKEDMTTQEAIVQNSTNGVMQTVSQDKEAIGYISL GSLNDTVKALKIEGVEATEENIVNGTYKISRPFNLAYKEDKINDLAKDFLKFCLSEQAQT LTLEEGYVPLKDTEKYEPAKVSGTLTVAGSTSVTPLMQKMAEKYQELNPDSKIEIQSTGS SAGIEAVIDGAADIAMASRELKDEEKDKLAVEVIATDGIAVVVNPSSKVENLTMNELKQI FKGELRNTSKLGK >gi|229269867|gb|GG666044.1| GENE 53 74866 - 76236 1810 456 aa, chain - ## HITS:1 COG:VC2712 KEGG:ns NR:ns ## COG: VC2712 COG2233 # Protein_GI_number: 15642706 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Vibrio cholerae # 8 456 24 472 480 198 30.0 2e-50 MESKFKELFQFEGKVSFKEAFPLALQHVIAMIAGCVAPALIFADAAGLSHADSIILVQMA LIGSALTSFLMLYPIGILGSKLPMIYGVAFPYVPTMIALCGQFESLGPEGIVAVVLGSQL IGAIVSIVFGLALKYITPFFPPLVSGTVVLAIGLTLYPVAITNMGGAGSVMAPGWGAWQY WLVGIITLLVNVGLNHFGKGITKLASVLFAMVVGYIVAYFFGMIDLTPVKEAGWISVAAP LHFGIKFEPSAIISFVIIFMVTCIEGIGDMSSTTIGGMDRNPTDDELRGGIVGFGVANVI GSFIGCLPTATFSQNAGIVSVNKVINRRVFFQAGLIILVAGFMPKISSLLTTIPAPVVGG ATLSVFAAITMNGIRMITEQPLTVRNTSIVGIAIAIGFGFTTIVTTAEGAGVNFMPEALK NAIGVSPVVLAAITSILMNVVIPETEADKRQEAVAE >gi|229269867|gb|GG666044.1| GENE 54 76529 - 77536 1174 335 aa, chain + ## HITS:1 COG:FN0776 KEGG:ns NR:ns ## COG: FN0776 COG2502 # Protein_GI_number: 19704111 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthetase A # Organism: Fusobacterium nucleatum # 9 335 3 327 327 357 55.0 3e-98 MKLVIPEDYKSTEDLYRTQVLIKEIKDYFQINLANNLNLKRVSAPLFVSKKSGLNDNLNG VEKPVSFNLPEADNEEMEIVHSLAKWKRYALMKYKFKVHEGLYTDMNAIRACEEPDNTHS FYVDQWDWEKIIDKDDRNETYLKQTVETIYRTMKSLDEYLCGLIPTRSKLLTDQIRFITS QELLDMYPDKDAKERERLAVKEFGSIFLLQIGDLLSNGQKHDGRSPDYDDWHLNGDIIVY NPVLDDALELSSMGIRVNSERLNEQLKQSGNLDRLKYNYHRMLLDDLLPQTIGGGIGQSR LCMFFLQKSHIGEVQVSYWPDDQRRLLANKGIQLL >gi|229269867|gb|GG666044.1| GENE 55 77578 - 78225 741 215 aa, chain - ## HITS:1 COG:FN1305 KEGG:ns NR:ns ## COG: FN1305 COG1917 # Protein_GI_number: 19704640 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Fusobacterium nucleatum # 103 211 1 109 111 82 38.0 8e-16 MKNISKGIILKAEEMIPTRENQTISKKLIDLEDFHILLMSLGQNTSISPEFYGQERIYLV LKGEINFNNEKLVNNELIFFEENRLFGIETDKESIFLEIGINLKEEEMKNIDKGQKIKLV DYLDYIDGAIANIDLVSKDDCRVVMMAFDAGEGLKAHKAPGDALVMALEGKAKLLVGDKE VEIEAGEQLVFPANVIHNVSAITKFKMLLILSIEK >gi|229269867|gb|GG666044.1| GENE 56 78227 - 79030 510 267 aa, chain - ## HITS:1 COG:FN0307 KEGG:ns NR:ns ## COG: FN0307 COG1120 # Protein_GI_number: 19703652 # Func_class: P Inorganic ion transport and metabolism; H Coenzyme transport and metabolism # Function: ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components # Organism: Fusobacterium nucleatum # 1 260 1 256 264 219 42.0 5e-57 MVSIKLEVKDAGFYYDKNHVLFKNLSFSLDQGEVLSILGPNGVGKTSLIRCICDFEKWKI GKSYLDGKDIASFSRRELWSNISYVPQKRSFSFEYSGIDMVVLGLASKLGPFAKPGERDY EKANNIMKSLAIEKLKDKSCSVMSGGELQMVLIARALISDPSLIILDEPESGLDFKNQLK IISLIKNLSKKENISVIINTHYPAHALEIADKCLLLMKDARYKIGKTSDIISKENIREAF GVEVILEKIKNDEKDYNTIIPISIVGD >gi|229269867|gb|GG666044.1| GENE 57 79017 - 80045 789 342 aa, chain - ## HITS:1 COG:MA1234 KEGG:ns NR:ns ## COG: MA1234 COG0609 # Protein_GI_number: 20090098 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-siderophore transport system, permease component # Organism: Methanosarcina acetivorans str.C2A # 14 342 13 343 343 245 43.0 8e-65 MIKEIFIKDKKIKLSSYIILISLPILISILALAIGRMPLSLGQIIDFFGAYLSGRDFDPM LESVIINVRLPRIITGLVVGAGLATAGLAFQGVFSNPLATPDILGVSSAASLGAIIGILL SLSTLSIQIFALVFGLVGVVFTLYIGKTRTRSSTIMLILAGLVVSSLSNALASLLKYTAD PTDKLPAISYWLMGSFARSSYKNLILSAPLIIFGIILIRLLIFRLNIMSLSEDEAKSLGV DVRKTRLIFIFASTLITASSISMCGQVGWIGLIIPHMARMMVGANNTHTLPFSISLGASL MVLIEALSRTVSVIELPISVLTAIIGAPIFISLIRKTGGGFN >gi|229269867|gb|GG666044.1| GENE 58 80042 - 81244 1752 400 aa, chain - ## HITS:1 COG:FN0305 KEGG:ns NR:ns ## COG: FN0305 COG0614 # Protein_GI_number: 19703650 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+-hydroxamate transport system, periplasmic component # Organism: Fusobacterium nucleatum # 70 394 8 322 336 143 32.0 5e-34 MKTIKKILLILCLQVFALTSMTACGKAKTEDKSESKEVVQNENNEEKDDTKADKKEEKPE ESKDESKKTRTITDHAGNKVEVPEKIEKIVIDQIPILSTYMAYHHGKAPYIVGYAGSLKE VISNTVLKDIAPELLDSQNTVQAQSDINIEEIMKLKPDVIFYNASNKEHYEALSKTGIPC VGFATVGTNGPADPIERYTQWLKLLEDVFGESGKTDDFIKAGQEIVKDVEDRIAKIDDSK KPSGMILWKYAQGVPIVAGKGVFGDFWLKRIGVKNLAGEAKGFAKVSVEQIYKWNPDILY LDGPGLLDIKTKDVYANSVEGIDFSNMKAVKDKKVYNTKLGMWNWFTPNPDGPLVLAWLA KSTYPEEFKDYDLKSMIKDYYQKWYGYELNDEQIKDMFDI >gi|229269867|gb|GG666044.1| GENE 59 81245 - 82003 659 252 aa, chain - ## HITS:1 COG:SA0257 KEGG:ns NR:ns ## COG: SA0257 COG0500 # Protein_GI_number: 15925970 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Staphylococcus aureus N315 # 9 252 6 253 253 197 43.0 1e-50 MEKNKIVFGHDFLKMLGRTRLRPGGGLMTDWLLDQIQIDKDTKVLEVACNRGDNLIRVYT KYKCKIIGIDIDQVAIDQALENINLLSLDKEIQVKNMNALNLDFEDETFDVIINEAMLTM LTNEDKAKALKNYHRVLKKGGYLLTHDVAVENESEDIRRQLSKFTNVDVYPLTVENWNKL FLENSFRPFSQRTGRMILLDRDTIIKDEGPVGAANFYRNAYAEENRARFTKMLERSKNSS ISYIVLASKKEN >gi|229269867|gb|GG666044.1| GENE 60 82099 - 82692 486 197 aa, chain + ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 1 197 1 206 229 58 27.0 6e-09 MDKIILKSELFYGLDEATIKHIFSCIDHKILNFSRDEYLYDFSEGFKAGIVLKGRIDLCT IDDGREIIDRIYRVSDSFSINFSSLADRFMICKKDSKVLVLDVYKVFEKHKRACTSRPLF MENIINLYDEQISYLTYKLDIYAKPKIRERINKYIYKYGKNALFSNNLSREDLAKFLACN RSALSRELSLMKKEGLI >gi|229269867|gb|GG666044.1| GENE 61 82744 - 84534 1712 596 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 1 593 1 587 714 567 49.0 1e-161 MVEKIAEKLKKHFGFASFRQGQEEIIGKILEGRDVLGVLPTGGGKSICYQLPALMKDGLT LVISPLISLMKDQVDALREDGIEASFINSSQDYETYIDTLNDLRKGRIKLLYISPERLDN EFFREFLREIKLSFVAVDEAHCISQWGHDFRPSYKLIADLYKVLGDDLQIAAFTATATKE VRDDIIKNLSLKNPYVKVTGFDRPNLKFLVRKPKDKLKFLKTYLEENEGKSGIIYASTRN RVDKLERNLKAMGFSVTKYHAGLSEEERKKAQEEFIFDKKDLVVATNAFGMGIDKSNVSF VIHYNMPKDMESYYQEAGRAGRDGADADCILLYSAQDIIINKHLINQGTNLAYRKIQLDK LQTIINYVNTSKCLRAFILEYFGQDYKGPCDFCSNCLDDIKKEDKTIDAQKILSCIYRLE QRYGISTVVDCLKGSKNKNSTEKGLKNISTYGIMKDKSSDEIKDLIGVLIADGYIKVVGL DYPILALTEKSKDILYSKDKFFARKTDIKKVSKNKTRSLASDEDQDLFDRLKKLRLELSK SRKIPPFIIFSDQTLKDMAIKKPKNEEEFLGVKGVGEKKLIQYGDLFIEEIKDCLS >gi|229269867|gb|GG666044.1| GENE 62 84570 - 85763 1370 397 aa, chain - ## HITS:1 COG:no KEGG:Apre_1414 NR:ns ## KEGG: Apre_1414 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 45 333 26 315 374 335 69.0 2e-90 MDDKKIKIDEELIEDKNENKEEKPNETKKIDLPKMLESINKRYLIFGLVGLVLIGLVIFK ISSKKNASIQNVATTSQIDENSYNQSRIMRVDLNKIKSIDFDLGSSDVRIQRSNTNPYIE YTELFRGDDNSYKLDVSFEEGVLKLKSKVKGKQLYMKDKIPIVRIFLPSEGGIEEIKGSI TAGDVKIDDLEVKNFDLRIVSGNISLNNGYFQGSIRNESGSINLTKSELLNTKLTTVTGD INIKESKLGNRLDFTTSTGNIIIDAKDTIDNYNVNAYLDVGNFVLGNISYRNITDGYLSD NKAKNNINLRTKIGDIVFNRGEGAKIENEEYLTKTSKVKDEEDNALEKNIDRTEKENKKR KKKKKETDQDSLENQNEESNDNEDQDLEKNSEEEENN >gi|229269867|gb|GG666044.1| GENE 63 85753 - 86145 243 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485305|ref|ZP_03915621.1| ## NR: gi|227485305|ref|ZP_03915621.1| hypothetical protein HMPREF0072_0708 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0708 [Anaerococcus lactolyticus ATCC 51172] # 1 130 6 135 135 171 99.0 1e-41 MIIIDVIKELKALLIMIFCVLSVFFVRKADMTILLAVISVFLFLTSLYIRANDLIISKNI FYILIASLNVFTMFFVIQYLIQGEITTELLEKVFAVFMGQDQTLFYIKWLFFLTSGLIIL EKLGGGKSGR >gi|229269867|gb|GG666044.1| GENE 64 86142 - 86882 718 246 aa, chain - ## HITS:1 COG:CAC3099 KEGG:ns NR:ns ## COG: CAC3099 COG0101 # Protein_GI_number: 15896350 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Clostridium acetobutylicum # 2 246 1 244 244 154 35.0 2e-37 MIKNVLLKLAFDGRDFKGYQYQIDQRSVEEELRKAIKEVTGEDNRIIACGRTDAGVHARS FYINFLTACDVNPKGFAYHIQPHLPDDILALSSKEVGLDFHARFSCKSKTYKYIINQEKN PHPIYRSYMENITYRLDYDKLDEGLEILKGDHDFRLFMKEDKNIDINTNRRIDDCYFKRG ETRLELYFKAESFLHNQVRIMTGSLIELARGKLSLDDFKAYFDPATKKRANPALSPVGLY LWEVEY >gi|229269867|gb|GG666044.1| GENE 65 86879 - 87673 704 264 aa, chain - ## HITS:1 COG:CAC3100 KEGG:ns NR:ns ## COG: CAC3100 COG0619 # Protein_GI_number: 15896351 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Clostridium acetobutylicum # 1 248 2 251 267 217 49.0 1e-56 MTNITIGQYLPFDSFIHKLDPRVKIIGVFLYIITIFFVKDFITYIPFIVLLITVLAIAKI PFKAIIKSLKPLIFIIVLTGVINLVTTPGKAIFSIWKFSITEEGIYRTAFTILRLVLIIL STSVLTYTTSPMELTYGLEKLFSPLKKFGFPAGELAMMISISLRFIPTLFDEANKIKMAQ MARGADFESGNVIDRAVSMIPLLVPLFINALKRSGDLATAMEARLYRIGEERTKLNEIYM HRSDWISIIGFTIFCAIIIVLYFL >gi|229269867|gb|GG666044.1| GENE 66 87666 - 88523 459 285 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 18 273 142 396 398 181 38 5e-44 MKIEIKNVDYIYNQGLPNEVYALKDINLEINSREIIGLIGQTGSGKSTLVQLLNGLLIPT NGDVIIDGINSKDKSKRKAARFKVGLVFQYPENQLFEETIAKDIAFGPKNMGLKEDEIHA RVKAAMEKVGLDYETYKDVSPFEISGGQQRRVAVAGILSMNPKVLVLDELTAGLDPIGRE EIFKELMKIYEADDELTIVLVSHSMEDVAEYVDRVIVMNGGEVYSDKSTFDTFTSVDLDT IGLDVPQITKFMRAYKKKNPDVDDKIYTVDGAIEELYKHLGGKND >gi|229269867|gb|GG666044.1| GENE 67 88520 - 89344 285 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 231 278 509 563 114 30 7e-24 MIKIKNLTYTYPGIDEDSEGKTALCDVSIDINKGDFVAILGHNGSGKSTLGKLLNAQIKP TMGEILVDDISSSDEGSEWDIRKKCSMVFQNPDNQMVATTVEEEVAFGPENLRVQHPELR KRVDKAIDQVGMSAYKHRNPSNLSGGQKQRVSIAGVIAMLSDYIIFDEPTAMLDPQGRKD VISLIQSLNKDYNKTIIYITHYMEEAVLADKIVVLDRGKKALEGSSREVFSQVKKMKDLG LTVPQVTEVAYGLSQKGIKFDRLPLTVEEFLESL >gi|229269867|gb|GG666044.1| GENE 68 89353 - 90798 1375 481 aa, chain - ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 12 469 4 465 466 186 29.0 7e-47 MARDQSEEDVITEVNNKKKSRTLTLVFLVIIALYLIVTVIFSFIALPNTKVNGRDISFAS KDEALKKPAEPFTIEIVGRDERKASLDLKDFDYSASIPESASIDQNPFKWPLAFANIASD DFHFDYNVKYDEEKLEKNLKGQALLDKVKEPENARLKYENGAFKIIPEVMGNKIDFGKLS KKIKDAIYSHKEEVVLKDDDYINPTVKNNSKELAALLEDGKTIEKMKIGFNFNGFDIKLE GEKFMEMFDTDKGSFELNYDKLTKFVDEVADKTDTYGKKRTFNATGIGKITVNPGVYGFV LDVPATVDEIYQLVNTRKSGDIEPVYERTGFRREADGSDLGSTYIEVDLSRQYMWYYQDG QVVLETPIVSGLPNTTKWATNVGVGSILEKASNKTLRGDGFDGSRYETPVKYWMPIGWDG EGFHDAPWRGAFGGAIYFSNGSHGCLNMPPAMAKKLFDLAPHGTPVVVYESSTHYSPAMS Y >gi|229269867|gb|GG666044.1| GENE 69 90779 - 91900 838 373 aa, chain - ## HITS:1 COG:BH1771 KEGG:ns NR:ns ## COG: BH1771 COG0116 # Protein_GI_number: 15614334 # Func_class: L Replication, recombination and repair # Function: Predicted N6-adenine-specific DNA methylase # Organism: Bacillus halodurans # 1 372 1 376 385 311 42.0 1e-84 MEKILISTSFGLESLVKFQLKDLGYKDFKVSDGLISLEGDLSDLAKLNINLRHADRVYLE LASFKAMDFEELFENVKKISWQDILNEDSNFIVNARTYKSKLFSLRSIQSISEKAIIDKL KVYYKKSFFEKKAERVNIEIMIENNLVRVCLDTSGEGLHKRGYRENSVKAPLRENLAAAL VDLSFYNPDRFLFDGFCGSGTILIEAARIARNIAPGIDRDFDFTSFKFINPKFFKDAKKE AMDKIDYSKKLNILGSDISGRAISLAKQNAINAGVEEDISFITRDFGSVAISNDYGVFIS NPPYGLRLSDTDLSEIYKKINHKLAGLDTWSLYFITADDKFDRQFKRVLSKKRKLYNGGQ KVDFYQYFGKRPE >gi|229269867|gb|GG666044.1| GENE 70 91970 - 92791 728 273 aa, chain - ## HITS:1 COG:CAC3665 KEGG:ns NR:ns ## COG: CAC3665 COG1073 # Protein_GI_number: 15896898 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 10 271 14 259 265 117 30.0 3e-26 MKYFYSQITKEDGIVMRGVVNTPDDFDENKKYPTVIIFHGFGGDRNGSVNFRINHAKYLT ERGFVVFRFDFSGSGESDGSFYDMTVSREEKELEMIHDFAKMKYYVDKDRLYWIGHSLGG VLSSLMAYKLKPKAMVLLAPASDMNNKDYLKVMAKTVFEGEVSGKTKIESNMPYESLISK VKEADIGGVKIHINFLIDFILKDIYGSASKYDGNVLIIRGTDDTLVFRDSNEKLRDAFKN ASYYEIEGADHSFTNEDYRKNLYEKSFEFLNEN >gi|229269867|gb|GG666044.1| GENE 71 92791 - 94161 1410 456 aa, chain - ## HITS:1 COG:CAC3595 KEGG:ns NR:ns ## COG: CAC3595 COG2509 # Protein_GI_number: 15896829 # Func_class: R General function prediction only # Function: Uncharacterized FAD-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 3 456 2 453 457 624 66.0 1e-178 MKNYDIIAVGAGAAGAFLAYELTKLETKKKVLIIDGGRRVENRTCPITDGKVDHCIGCKP CNIMYGFGGAGTLSDGKYNITTNFGGDLHRYVGEKKAMELMEYVDSVLMSFDGGDDLELY STDKNDLKTKCLRHDLHLLDAKVRHFGTDRNKIILHRMYEYVKDKIDFEFSTMVEDVDYE NGKYIVKTDKGGEFSADDLVLAAGRSGSKWIGDVCDKFGIKSKRNRVDIGLRIEVPAEVF KHITDDVYEAKIMYQTKQYNDIVRTFCMNPYGHVVTENTNGILTVNGHSFTDPKLQSENT NFALLVTNRFTEPFEDSNEYGESIARLSNMLGGGVLMQRFGDLVKGRRSSDRRMEKSFTK PTMKATPGDLSLVMPKRQLDDIIEMIYQLDKIAPGMANDDTLLYGIEVKFYNSEIEVDEK FESKHKGLYCVGDGSGATHSLSQASACGIEVARILA >gi|229269867|gb|GG666044.1| GENE 72 94370 - 95053 570 227 aa, chain + ## HITS:1 COG:jhp1251 KEGG:ns NR:ns ## COG: jhp1251 COG1296 # Protein_GI_number: 15612316 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Helicobacter pylori J99 # 3 223 6 227 228 165 40.0 8e-41 MKKAFKKAFPYTIPVIIGYLFLGITYGIMVSQAGYNPLFAPLMSMTMYAGSMQFVILPLL KSDISFIAIIILTLSVNIRMMFYGVSLLKDYKNSRSKFLFILTLSDETFAIDTAVKPPED VNKADFYLAIGIINYLIWIFSSYLGAILGGMINFNTMGMDFVLTALFLVLLVEQYFSTPN HKPLKVGLAIAIASLLIFKPGNFMIPALLLIALSLYGFKDKIEVKND >gi|229269867|gb|GG666044.1| GENE 73 95498 - 97234 2044 578 aa, chain + ## HITS:1 COG:no KEGG:Apre_0318 NR:ns ## KEGG: Apre_0318 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 578 1 579 579 875 75.0 0 MKKEINISNNKAVINFSKAFFNDTDDLLKSEGFFEVICSFVRFHKENQTRIYTYLEKFFR ASDIEVLAGEIRDITKILTVMSLDEISEKINKYHDLDKERDALIRIVEDIYDYWRKLERY SIIEQSDYERGLEVENFLSSNIRFKDLILDVYRKAEFSVTGKVPKVFRQVPAGANASVIV KNFEISYPEELQFLNEIPFITKVMIETPYITYTKSNKRDGYFKEVFENPIEGLDIDTDEF LCYPAKVGDNLIYIYFHQDLITHGISASNLFDLADEEEILNKRPDAIYLFGGENSKDQNV FYENKNGLLIGYVNYTDKKDYFGYLKKMCLTLSNIISMKKSYLPIHGAGVNIVLQNGKSA NVVILGDSGAGKSESIEAFRTLAKDYIKDMTVIFDDMGTFRIKDDKVMAYGTEIGAFVRL DDLDAGYAFKQIDRSIFMNPDKVNARLIMPVADYATIMQGYEVDFFLYANNYDKLKKDED SISILDDEKEAIKIFKRGARFAKGTTTETGLVESYFANPFGPYQKQDTCDKLIETYFNKL YENNKKVGQIKTQLGVSGMETDGPLKSARELFEIIKAL >gi|229269867|gb|GG666044.1| GENE 74 97642 - 99189 1525 515 aa, chain - ## HITS:1 COG:no KEGG:FMG_1385 NR:ns ## KEGG: FMG_1385 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 46 515 22 485 485 242 35.0 4e-62 MIGKKQKVLFIFLALALVGCGKEKLDEELTKVSEEERDKKVNTLAEKSEDEEENPKEKTL AKKESNEDIKLVNEINFKRKPIKAQALEGAKAGSKSTLVEDRQARKDFVTKKQMEKAKGL RFGIHLPKILLDSKDADLANKEIEKDLEELKTMYKDADEYSKNSDEPFVHAEFSTYQDEE ILSLFIHLYNNIDSSFQVYRTYNFSIKDGKRLTDDELLSYFAISPDQKLDLMEKSLADYY RHIIDHYDSYLSNPSYQYDMGNKEGFAIKDLWQDNPNIFYVNEVGRLMFFSKIYPDTGIG EVIETQTLAGPDYKTNRYSDDFVRMATKLGIDPDDEKVNAFIIYMGRANAEDTLPNVMSK LFAWQACFADYKDPRLILEGQRDPYDDNNAFLTGNDFYLVVPKWENAVVSLRSVEKRNDG KVIEKDNDFLDGICQRSTVLICQSQEKDTPGVKIKIAYRDKEIESLVSLDKNGNLTGLNP EIIDARKILDWDKTVLEYSFSGPLYEKILTIMGRG >gi|229269867|gb|GG666044.1| GENE 75 99199 - 100644 1189 481 aa, chain - ## HITS:1 COG:no KEGG:FMG_1386 NR:ns ## KEGG: FMG_1386 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 9 481 4 476 518 633 65.0 1e-180 MVGERDNNENINIIKDTDQVKDGQVKCPKCGSTDISTNTKTGKLRCNFCRNEFDLDLAEA DDEISSLEGSKSHSGAADIDLEASNIITLKCESCGAEVVIDTATSTQARCHWCRNTLSIN SKIDNGAVPDVILPFSVTRNEAKEEIENFVGQRKTFAHPQFIKEFNAENICGVYFPYMLV DINGHMKLSGKGEILTNTRKVKDGDGEKTVYDADLYRVGRDFDISIDDLTIESSLDKLDY SSKEKTTNIINSIMPFDTENCVKYNANYLKGYTSEKRDTNVSDLKKITDVWGSDVARFAI KDTIEEYDRGVNWQEEEFIVKGDSWKASYLPVWLYSYMENKGDKHVLHYVAVNARTKETM GSVPINFKKLFMASALVEVISFLIALVLWFVAAFDIFDDTKFQDSRNFFWVLLVAGFIYY FNVYSKYRNQDARHSYEVENKHEVTNLISIDEFIRHEYGLKNSCIDGENSCEIKENKIKF E >gi|229269867|gb|GG666044.1| GENE 76 100664 - 101890 1419 408 aa, chain - ## HITS:1 COG:L186490 KEGG:ns NR:ns ## COG: L186490 COG4260 # Protein_GI_number: 15673331 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Lactococcus lactis # 16 373 2 322 389 147 29.0 4e-35 MGFIRAFTGALGGSFADQWLDFYKPMPGISATAGIFPAVSQGTNQDRGTNTGASKNIISN GSKIIVPEGTALITIENGMITGIVAEAGGFIFSSDETSSQSIFVGDGVMSSLIQSTWEKI KFGGQPGAEQLAFYVNLKEIPNNRFGTQSEIYWDDAYLGTQVGAVTRGTYTLKIVDPLLF VKNFLPQKYLIEDAPVFDFGDMDNELGEQLFNEVVGSLSAAFSNYTNDPSRGNRMSKIQG DQIGFAKSLTKAVEDACQWKTDRGLEIIKTAILAIEYDEDTKKLLSDVKKADALSGNRGN SFFQQSVARGMQGAGENGGGAGMAFMGMGMNAAGSMAGGLNQPEGANSYQPNFGVGQNMP NQNQQNQQASNNSQVDPTEKLIQMKKLLDAGVISQEEFDKVKSDLLGL >gi|229269867|gb|GG666044.1| GENE 77 102114 - 103685 1147 523 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485321|ref|ZP_03915637.1| ## NR: gi|227485321|ref|ZP_03915637.1| hypothetical protein HMPREF0072_0724 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0724 [Anaerococcus lactolyticus ATCC 51172] # 1 523 1 523 523 967 100.0 0 MYRKLFIYMIIFAGLLLFFIVLALVLFDQYKNVRKDYVKSLDIQVSILDKEIKGYFDKSA ISAMHLSQDTSECLEEILDKEKISFEDLRDNQKLLSQIQDRIFENLKSSMFYADTSGAFV LFNTTVNSKNKGAKDSRSGLYLKLDSRSLKESSVTVYRGDAEVAKKHSAMPHRKWKLEYD LSNLPAYALLAKNVNKSIYDSYRMTKVFTLPGTSEKVMLISLPIVSRDGKLYGVCGFEVE EMYFKEKIAQPSKMKRLSSVFLPVADGKIDTEKALSSGTQEGYYFLPDDILEIKNHGRDL KEFVGSKSKYIGLLREVSLIENGDKSLIISMIPLDEYNRDIFKNISNIAISVVLFLFFAI VISLNFTRRYISPITDGLSLIENQEKILDEDYRQDILDSGFYEINKFLENVREKIKDRSI KGLPPYLEYKFKKFIEATSSLTPAELNVLVLLIKGYDVDQLPEILYISKSTAKHHILKIY KKLNVSSRGELLLYLDLIKGCGMVDQIIGNVNEENDQVNEKIE >gi|229269867|gb|GG666044.1| GENE 78 103737 - 105056 954 439 aa, chain - ## HITS:1 COG:no KEGG:Bsel_2944 NR:ns ## KEGG: Bsel_2944 # Name: not_defined # Def: ABC-type sugar transporter periplasmic component-like protein # Organism: B.selenitireducens # Pathway: ABC transporters [PATH:bse02010] # 32 369 42 383 485 192 30.0 2e-47 MKKSKNKRLAIIIIFVFIIITLFVILLNNKKEPVSLTMWHVYGEQASSPMDKLVDDFNET VGSKEGIVINVTATSNSAEIGDELLDSQAGKSGAKKMPDLFFCHSGNADDLGSENLIDWQ DYFTKEELSDYQKDFLEDGKVGDKLLVFPISKSTHMLFINGSMFARFSKDTGLDYEDLST WDGFFDAAEIFYDWSDGKAFCAMDYILREIELACLSTNPNAKLHNDHGWYDENNKEFKKE FDKFMTSLVKGHIIVSDLYANTQMMTGESLAGISSSAAVLYYNDTVTYPDNRSEPMDLKV LALPISKGGNKVDTLAGTGLCAYKTTDEKAKAAAIFAKWITESQRNLDFVTKTGYMPVRN EAFNKVLSMEFENHDYKDLYHSLSKMEKDYSFLSESYDYNRVLNFYDWLRANQKSFEERY KSGEDVNSLIEECWEKLIG >gi|229269867|gb|GG666044.1| GENE 79 105248 - 106150 965 300 aa, chain - ## HITS:1 COG:CAC2707 KEGG:ns NR:ns ## COG: CAC2707 COG0122 # Protein_GI_number: 15895964 # Func_class: L Replication, recombination and repair # Function: 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase # Organism: Clostridium acetobutylicum # 13 298 6 290 292 230 41.0 2e-60 MRYITDEKRKLNIKESPEGLILREDSFKVDHIFECGQCFNFRKNDDGSFTAVFLGKIINL LECDGYTLVRNVSLDDFYDIFYDYFDLGTDYGAIKQALSESEILKEASDYGYGIRILNQE LFETTISFIISANNQIPRIKKAVRIISERYGTYLGEYMGEKYYSFPSPEVLANVDPLELR EYARVGFRDVRIVETAKAFVDGFLNFEDEKTLTDKDLHNKLNNLPGIGPKVADCIMLFAY HRRETFPVDVWIKRVMETLFIGKEVPKKQVDNYAREIFGDLAGYAQQYLFYYGRENAIGK >gi|229269867|gb|GG666044.1| GENE 80 106150 - 106932 821 260 aa, chain - ## HITS:1 COG:SA0982 KEGG:ns NR:ns ## COG: SA0982 COG4509 # Protein_GI_number: 15926719 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 80 249 61 229 244 107 35.0 2e-23 MKSKIMALIRFVLILIILACISILGKRGLDYWTNMKNNRYIEDLSKQVEADVDKDSNGDV DVETVKNPLARLEKIHLSLLKKLKEQNPDVIAIIEIPGTGIKYPVLQGPDNEFYLRKGLN KEYDIAGSIFMDVYNSPDINDDNSVIYGHHLEIDSMFTPLDQYRKQEFAEKNRTIYLTTK DGLREYEIFSAYGTPSSSDYRTLDFTYDGDKVPYFNKLRSSSEVKLETRPFTEKDTIITL STCQYDYADQRLAIHAVRIR >gi|229269867|gb|GG666044.1| GENE 81 107020 - 107256 330 78 aa, chain + ## HITS:1 COG:no KEGG:Apre_1387 NR:ns ## KEGG: Apre_1387 # Name: not_defined # Def: glutaredoxin # Organism: A.prevotii # Pathway: not_defined # 1 76 1 76 77 108 73.0 5e-23 MKDYKLYVGTVCRFCKKVETFCEENNIDIPLVNINEDREAMLELMEKGGKRQVPCLYHDG QYLYESDDIIKYLKENYK >gi|229269867|gb|GG666044.1| GENE 82 107265 - 108071 1222 268 aa, chain + ## HITS:1 COG:CAC0629 KEGG:ns NR:ns ## COG: CAC0629 COG0561 # Protein_GI_number: 15893917 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 1 267 1 267 268 120 32.0 2e-27 MIKLIASDIDETIISRDQKVPERNKEAIKKAIEKGIIVILATGRGPYEIFDIPDQAGVVA DDRYIICCNGAVIMNVKTKEIVNVVDMDFAYARKIFAYAYENNLTFYLYTLNKKYGINLS DESIVAEKHINILDTDNIEFLKDETILKVIIKNKDMNKLQAQEVDIAKITDYNLEISYSS NMYMEINAKGVNKAVALKKVCDYYGIDLKDVLAIGDNHNDVAMLEEVGRSVAVNNARLQV KQTADYTTSLDNSKGAVGEAIEKFVLNL >gi|229269867|gb|GG666044.1| GENE 83 108187 - 108441 312 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485327|ref|ZP_03915643.1| ## NR: gi|227485327|ref|ZP_03915643.1| hypothetical protein HMPREF0072_0730 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0730 [Anaerococcus lactolyticus ATCC 51172] # 1 84 1 84 84 87 100.0 3e-16 MLTLLLIIGAIFIGIPLIKLVFKLILGVLGITIGLVSLPLLIVGGLIILPIVIIFGILTQ LLPILIVGGLIYMGYRYMTNREYY >gi|229269867|gb|GG666044.1| GENE 84 108584 - 109063 787 159 aa, chain - ## HITS:1 COG:TM1128 KEGG:ns NR:ns ## COG: TM1128 COG1528 # Protein_GI_number: 15643885 # Func_class: P Inorganic ion transport and metabolism # Function: Ferritin-like protein # Organism: Thermotoga maritima # 3 159 7 164 164 109 43.0 2e-24 MSKVLDLLNEQMNFEYESAYIYKAMAAYTDRLELDGFTHWFDSQVKEEIEHGEAIKHFLQ EVGYDVRYKAIAEPQYDYESLVDVFKAALAHEKEVSRRIYEIAELAKEEDLRVFSFIKGF IDEQVEEEDTVGKIVTRLERINGNWGGIYILDHELGYRK >gi|229269867|gb|GG666044.1| GENE 85 109056 - 109361 342 101 aa, chain - ## HITS:1 COG:no KEGG:Apre_1392 NR:ns ## KEGG: Apre_1392 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 99 1 99 100 70 43.0 3e-11 MKDLLLIKKLNPLIDSTKVFPITFQLDGKFTKKKAMEIFCGLKSKGIIAGDEFMIKDKSF TVNINSENTTQVIKEILARNLDIYGVYIPYGEMLEKGEINE >gi|229269867|gb|GG666044.1| GENE 86 109404 - 110003 556 199 aa, chain - ## HITS:1 COG:CAC1577 KEGG:ns NR:ns ## COG: CAC1577 COG1636 # Protein_GI_number: 15894855 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 196 10 206 208 171 49.0 8e-43 MMEEIIQGLDKEGRKPSLLLQVCCGPCSTQVIERLREYFAMDLYFYNPMIYPREELDKRA ENLQIVAEKSAFDGEVIIPANDMRDFEKVAQKRKDDKEFGRACYDCYKLRLEETARLAKE KSYEYFTTSLSISPYKNAQWLNEIGKELEEKYGVKYLYADFKKKDGYRKSIELSKKYGIY RQEYCGCIFSKKEMEENNC >gi|229269867|gb|GG666044.1| GENE 87 110082 - 110474 645 130 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485331|ref|ZP_03915647.1| ribosomal protein S9 [Anaerococcus lactolyticus ATCC 51172] # 1 130 1 130 130 253 100 1e-65 MADNIIQSTGRRKTSVARVTMVPGSGNIIVNGKDLDQYFDFESLKIIARSPLTLTENLTS FDIRVNVNGGGFNGQAGAIRHAIARALIIANPDLRIALKRAGFLTRDSRKKERKKPGLKK ARKSSQFSKR >gi|229269867|gb|GG666044.1| GENE 88 110485 - 110925 770 146 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485332|ref|ZP_03915648.1| ribosomal protein L13 [Anaerococcus lactolyticus ATCC 51172] # 1 146 1 146 146 301 100 4e-80 MKHQKTWTATPSNIERKWYVVDAEGMVLGRLASQVAAILRGKNKPTFTPHFDTGDYVIVV NADKVVLTGNKEDQKEYKRYSGYTGGLKITKFKDMKAKFPERIVENAIVGMLPHNKLGRA MAKKLRVYAGPDHGHEAQFPEALDLK >gi|229269867|gb|GG666044.1| GENE 89 111104 - 112507 1548 467 aa, chain - ## HITS:1 COG:FN0993 KEGG:ns NR:ns ## COG: FN0993 COG0168 # Protein_GI_number: 19704328 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Fusobacterium nucleatum # 2 462 22 481 483 357 45.0 2e-98 MLVPLLVAFIYQEGFKDKLYFILPILISGLGGSLLVKIGDEQGHIYTREALFTTAACWVI FSIIGAIPLYLTPTNYHTFLDAFFEMASGFTTCGASVANDVELLPHSIIMWRSLSHLIGG MGILVFTLAILPKSNKESSNLLQAEMPGPSFGKLTPKLGKTARVLYIIYLVMTLITVIFL MFGGMNLFDAIIYAMGAAGTGGFANKGLSVGYYDSRYIELVLSVAMILFGVNFNLYYYAL IRSAREGFKSEELYWYLGIIAIATGLIFFNIRGYYDDLAYTGIQSLFTVSSIMTTTGYVS ADYGAWPMFSRNILILLMFIGASAGSTAGGFKVSRFLILFKATINHIKKVINPRRVTITK LDGKKMDEELEEAVNKYLVSYILLFILFMVIVSRDVENFEAAFAAVATTFNNVGPGLKDF GPVSSFAAMAPTSKFTLTFAMLFGRLELYPMLLLFSPYSYKKLAKRK >gi|229269867|gb|GG666044.1| GENE 90 112570 - 113931 1929 453 aa, chain - ## HITS:1 COG:SP0480 KEGG:ns NR:ns ## COG: SP0480 COG0569 # Protein_GI_number: 15900395 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Streptococcus pneumoniae TIGR4 # 1 440 1 435 449 259 33.0 9e-69 MKIIILGAGKVGSFVTKDLSNEGHDIVVIDRNKEVLEELLATNDVMGLVGDGRDVEALVE AGAKDCDLFIAISQSDDVNLIASTFAKNLGAKNIIIRLREPRYVKHRRFIGEVTDAMSIV NPEYIAAKDLQRSLKYSHALNVESFFKDRAIMMELVIDEGSDLDGRKLSDLRTYSENYHT LIGIINSDGDVNIPHGDDILKAGDKIYVIGAKEAVDSFYRHEQKGAYDIENILVIGAGNI SKYLVGLLVDRGFKVTVVEIDRKKAEDISEMHEAAVVINADGTSPEVLEELRLNHFDALL ALTGIDEENILISLLAQKSGLEKVIAKVNRTKLLKMTGILDNDTTFAPKMAASDVINRLV RSKVNARGKSISSLYRLEEGEVEVIEFKAIDHSRILNRPLKDLSIRDDSLVLAIDHGQVE IEIPNGSSKINLGDSVLVATTNHSFKVLDDILE >gi|229269867|gb|GG666044.1| GENE 91 113997 - 115190 1669 397 aa, chain - ## HITS:1 COG:lin0542 KEGG:ns NR:ns ## COG: lin0542 COG1473 # Protein_GI_number: 16799617 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 1 397 1 390 393 277 39.0 2e-74 MTDTIKKSILANEEKMIADRRCMHENPELSMKEVKTTAFIKKELEAMGFNPVEIDPTGLM VEINPESKGKTVLLRADIDALPIKETNDFDFKSQVEGVSHACGHDIHAAMLLNATKALLK VKDDLNGRVRIIFQPGEETGEGGRAVVSGGYTKDVDTGFAIHIHTAWDLGKAATGYGEVM ANNTFFTVKFKGTSAHSSTPYQGNDAMLMLANFINVAYAIQARKIDNVFHPVVLNLGVVE GGSASNAVAADIRLDGSFRSFSNESVDFMVKELEKVAKLSAEIYGGEADFDYHMGAGAVI NEEKSTDLSVKIAREIFGEENVSTDLKLAGSEDFGFYLSGYKDVPGIKGTYMFIGGRDPE NKATYPQNHATDFNPDERAMKYGAELLARYAYDYLKK >gi|229269867|gb|GG666044.1| GENE 92 115298 - 116377 1184 359 aa, chain - ## HITS:1 COG:SPy1105 KEGG:ns NR:ns ## COG: SPy1105 COG0687 # Protein_GI_number: 15675088 # Func_class: E Amino acid transport and metabolism # Function: Spermidine/putrescine-binding periplasmic protein # Organism: Streptococcus pyogenes M1 GAS # 1 354 1 354 357 342 49.0 5e-94 MNKVYKFILGILGLTLLLVFCKDRLNASSTGSSDKDIYFYNWGDYVDPQILRDFEKETGY RIVYETFDSNEAMMAKIEQGKTHYDLAFPSEYTVEMMKQKGLLEKLDHSKIKGLDNIDER FLDQIYDPGNEYSVPYFWGTFGIIYNTEKYGAKDLDSWAKLWDPKFKGEILSFDGARETL GIGLLKNGYDINEKDEKILRKVKNDLVPFMANVKAILADEIRMYVAQGEADIGITFSGEA AKAEALNDKLAYIIPKEGSNIWFDTMVIPKTSKNKEGAYALISYLLRPEVAAKNADYIHY ATPNKKAMKLVKPNPRIDKTLYPDDDIIDKLTVFKDLGKETTILYNDLYLDLKIAPQAE >gi|229269867|gb|GG666044.1| GENE 93 116361 - 117164 650 267 aa, chain - ## HITS:1 COG:lin0799 KEGG:ns NR:ns ## COG: lin0799 COG1177 # Protein_GI_number: 16799873 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Listeria innocua # 4 262 2 259 268 255 59.0 8e-68 MENKSNKLSKLFLIFVFIIMYLPLAYLIFYSFNSGGNMNSFESFTLEHYQAVFSDKRLLN IVLNTLILALLSSLIASIVGTLGAISIYYTKNKKIKKQLLSLNSVLMVLPDIMMGASFLI LFSILLKIPMGFFSVLLAHIAFSIPIVVLMVLPRLYALNEDMIRAAEDLGASDMMILNKI ILPNIASGIFAGFFMALTYSLDDFAVTFFVTGSGFSTLSIEIYSRVRSGISLEINALSAI IFAISLVMVIIYYIIERRETKKYEQGL >gi|229269867|gb|GG666044.1| GENE 94 117154 - 117951 665 265 aa, chain - ## HITS:1 COG:SPy1103 KEGG:ns NR:ns ## COG: SPy1103 COG1176 # Protein_GI_number: 15675086 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component I # Organism: Streptococcus pyogenes M1 GAS # 1 261 1 264 264 253 55.0 3e-67 MTKKYQKLTFIYYIWILVFIIAPILLLLYQSFFDIYGNFTFDNYIAYFSNKNYIIMTLNS FLTAFLITSFTLLWAYPFSYFLTKSKHKDLILLLVILPTWINLVLKAYAFIGLFNKNGTI VGLLGLASQGFLFTNPAFILVASYVELPFMILPIFRSIDTIPREYIIASEDLGASKLQTF RKIILPLSMDGVIAGFQAVFIPSLSLFLITRIIGGNKIITLGTAVEQHYLVTQNWGMGST IGLILIGIMFAVISLLNKKGEVNGK >gi|229269867|gb|GG666044.1| GENE 95 117944 - 119056 1356 370 aa, chain - ## HITS:1 COG:lin0797 KEGG:ns NR:ns ## COG: lin0797 COG3842 # Protein_GI_number: 16799871 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Listeria innocua # 17 363 14 360 364 421 61.0 1e-118 MDKNYEKYSVVLDGVSKFFGDEEVLKSVDLELEKGKFYTLLGPSGCGKTTILNLIAGFLE PSKGSVYINGKNVGDVPASKRTVNTVFQNYSLFPHMNVYDNVAFGLEIKKIDKAIIKKEV EKALEMVNLAGFERREVSQMSGGQKQRVAIARAIVNKPDVLLLDEPLSALDMKLRKSMQV LLSDIQWELGITFVFVTHDQEEALALSDHIFVMDKGKIVQQGPPKDIYDEPINRYVAEFI GESNILKARMVDDYKVEFAGKVFDCSDAGIAKGERVEVVIRPEDIEVVPLNQADIVVNID NILFRGVFNELIAIDKMEFSWKIHTTRRFEEGDDIGIKIDAENIHVMRYNETEEAFDKRI EKYATGESDD >gi|229269867|gb|GG666044.1| GENE 96 119199 - 119948 822 249 aa, chain - ## HITS:1 COG:no KEGG:Apre_1401 NR:ns ## KEGG: Apre_1401 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 242 1 247 254 104 36.0 3e-21 MKREYRFSSILWIMIIGGLTNYLLIKLISAIGGDNFIVDILGDLLTGIISFVFVFSLSSG LIRNRMGSVGDYLNQVNYLNGKVLTVGFLISIAQAIAQYAFSASGAVGVFSAVASPSNKS VFAIGTIILPIVCAIIFLVLAIFFAYSNFYLADHYDSEDGVMTIIGKIFSQGKKLFKKTL ILGLKWVGIPLIIFLGLIASVFLIKDEFLVWGLLSFYILVFAVIMVITTIILMARLSDAY LDDRYEIQS >gi|229269867|gb|GG666044.1| GENE 97 120054 - 120326 475 90 aa, chain + ## HITS:1 COG:FN1391 KEGG:ns NR:ns ## COG: FN1391 COG2388 # Protein_GI_number: 19704723 # Func_class: R General function prediction only # Function: Predicted acetyltransferase # Organism: Fusobacterium nucleatum # 15 87 16 87 89 59 49.0 1e-09 MIKINKDKSRAEAIEDDKIIGLCEYKINDGVIDIYHTEVDRAYGGRGIAKKLLDEVVNLA RNENKKIFPTCSYVAKKFDEDRKYEDVDAR >gi|229269867|gb|GG666044.1| GENE 98 120434 - 121594 966 386 aa, chain + ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 6 376 2 380 383 86 25.0 9e-17 MENSNKNWLRKPGILSVSIILAVNAIISGGLIFIKDELGISLAQAEFLVSLPSITTIIAI LLSEPISQRIGIKKCVSLGLFLVGSSAFLPLLSRTYLSIFISRLILGFGVGLYNGHAASL INIFYKGDEAASLHGIRNSCEYIGLMLLLFIAGLILKISWHYVFLTYTIAFLILIFFNLT VEDVVHPKTLAEEKFKITLQTIFFMVFAGVTLMDTTAVTIRFSTIATQGLGPNANINMLT MVIPIFGMTTGFFFGKINRKLRSKTILLGLLIYIFKNIILSVFGQNVYVYMVGMALTAVS QSLCFPYIFAEVARVTRSSSSRIVNNLIFVGSNLGGFLASSFLSLVTLFFNLKGPTTAFM GFSVLYLGFFAVYFYEYLSVRSFRLR >gi|229269867|gb|GG666044.1| GENE 99 121720 - 123015 1038 431 aa, chain - ## HITS:1 COG:PA3206 KEGG:ns NR:ns ## COG: PA3206 COG0642 # Protein_GI_number: 15598402 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 177 420 173 429 445 75 26.0 2e-13 MFNYIIKRFKKIVIRILLLLFFLIFLLMTFLYLNYKLSVEYPNPNDVYTYITDNKTDVYL NEKNRGFLKEKNIWALRLDKSGKVTESFGKPREVKDKFNLTDVASFTRYYLADYPVFTYI LGDGLLVFAYPKNSLDKLPFNYYNYHNLIFNLWLVVLFIILFLLFVYIFYRLDIRDILKN ISPFQKAIDELFEDDFEKLDENGELRDLALSINEANEKYKTLKQSQSKWIRGVSHDVRTP LAKISWELSKADRKDLDIRNIQNQVLKISNILEGLNLTMSLANLDKENFVEKSPVKLIRK LIVDKLNENPTRELIFENKLAKQNQEIKMDSNLFYRMLENILKNSLIYTGGKIWTTIMDA DDKLIITILDEGGGVDESIIKRINEEDLTNITSHGLGIFIAKQIAELHGGSFLIRNRKTG LEVSFIFDLMN >gi|229269867|gb|GG666044.1| GENE 100 123017 - 123712 853 231 aa, chain - ## HITS:1 COG:BH3426 KEGG:ns NR:ns ## COG: BH3426 COG0745 # Protein_GI_number: 15615988 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 8 230 5 238 241 151 40.0 1e-36 MDFRNNFSILIVDDEASLLENLYNFLKDKGFEKLYTAKNIKESRFKLANFKIDLVVLDLM LPDGSGFDLLKEIRKESDMAVIILSALDGIDDRKEGFENKADDYLVKPFFPDELLWRIDA VLRRSKKIKNDGKISLGKVIFDKAKGILIKNGEEIPLTATQFKILAYLADNMNMIVSIDR ILENIWEDSYGYENTLITHIYRIREKLEDNPREPKILITIKGLGYKLVKED >gi|229269867|gb|GG666044.1| GENE 101 123841 - 124734 275 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 292 1 298 305 110 30 1e-22 MKKILEIKNLQKSYNKKKVLDIDYLEIAQGSIYGLIGKNGAGKSTLMKLILGLVRKDGGE IRVFGQEVGPKNQKDLNKNLGALIENPSFYDHLSGYENLEIICSLKGINKAEISKTLDLV GLYNVGKKKARDYSLGMKQRLGIAIALIGNPKLLILDEPINGLDPQGIEEMRNLFKNIVK NTSTSILISSHILDEIEKISTHIGILKEGKLTYNGSLEEYRRLHPPFISLQTSDNQKALA LLDMGQTRIDGKKIILGKVSNKEISEIVNFLHGKVDIYRIEEEKESLEKLFIEESRS >gi|229269867|gb|GG666044.1| GENE 102 124736 - 125488 533 250 aa, chain + ## HITS:1 COG:no KEGG:FMG_1407 NR:ns ## KEGG: FMG_1407 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 250 1 250 250 377 95.0 1e-103 MANLERKKYKRLGINFLTLIVFFAQMLMVAGVSHSKSFAEGNYPLAYILDTYLFISLLIN PILISSLVKKVIEIEEKNKMWQLQVSLGEKVNSILINKFKNLSLKLVLLQIIEAIVFLLL AKKSSHFNMDTDMILRYALVNISAIIINLFFMALFMIIEMKSKRVYTLSFIAIIGGLTGV ITMLTSETLAFVNPFAWMASLLNISYVSEGGKFIQVLNPINFYTPIIALILLIACLGYLK AMKTYNLYKD >gi|229269867|gb|GG666044.1| GENE 103 125497 - 126201 506 234 aa, chain + ## HITS:1 COG:no KEGG:FMG_1406 NR:ns ## KEGG: FMG_1406 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 234 1 234 234 327 88.0 2e-88 MLKLELKKIKFTNILLVSLIIPLLANAFGLINFMGNRETLTQEWQSLWTQVSLFYFSFFY IPLIAIIIASLWATEHKAGLKFIRLSPKKNMDFVGAKLALAFIIICLCQIYFLGLFYLGG KYIGGFSTTDFSIYFYYIGLSILLALPIIGIFGALAIRIRSFGIIVLLSTIFTIFGFATA YRALKIIGLSYLAIEANNFRFISPHDLILLAIFALAELIISLYLSNKFLKYENK >gi|229269867|gb|GG666044.1| GENE 104 126335 - 127267 1098 310 aa, chain - ## HITS:1 COG:FN1397 KEGG:ns NR:ns ## COG: FN1397 COG2066 # Protein_GI_number: 19704729 # Func_class: E Amino acid transport and metabolism # Function: Glutaminase # Organism: Fusobacterium nucleatum # 12 308 5 304 304 238 43.0 1e-62 MFFDRNEIDRRIRQSIRKSEKFIGQGEVASYIPELLNVEPDTFALSITSTSGDTYSYGDI DKEFSVQSISKILDLLLALHDNTIEEVYSKVGSEPTKFEFNSLVPITDKPANPFINAGAI TTSSMIRGRDVDDKFQRILDFYKMISGTDKARLMEDIYKSEMETSDRNKAIAYYLKSKGI FDEDPSEVLDLYIRSCSIGTNVVDLSHFGAILANKGYGLYETKDLIPESIVSIIVSQMSS CGMYENSGKYLMNVGIPSKSGVSGAILGIVPGLCGIAVYSPRLDKTGNSVRGKELLKILS YELDLNIFIR >gi|229269867|gb|GG666044.1| GENE 105 127365 - 127955 740 196 aa, chain + ## HITS:1 COG:no KEGG:Apre_0304 NR:ns ## KEGG: Apre_0304 # Name: not_defined # Def: response regulator receiver protein # Organism: A.prevotii # Pathway: not_defined # 1 196 1 196 196 201 58.0 1e-50 MRVIDILENERWIRKYDFYQDFMKSTYYESLIDSYKRLNQKILFKSHVHGPAHIERVIFF VHLLAFYNKLDFYDLDVLRNAASLHDTRRRDDSYDPGHGPRAAVESIGYSYARDEDKKII QAVIAAHSPEDEAMDKIIKNFIGPEDDFARTKFLAELFKDADALDRVRINHLDPRYLRNS FSKDLVEFSYDLYKHF >gi|229269867|gb|GG666044.1| GENE 106 128010 - 129173 1331 387 aa, chain + ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 262 385 136 254 255 82 43.0 1e-15 MLKRSKAYLAGLVLGLGLFFPKTSLADSVMINKEVADSASFYTEENGRLNPSANIDTTDL YNMVSEDDNFYKIEYKGKIGYVDKNNFYKLNHTSLVSDCEIKKDPTDEADNLTSYKLKKG TKVTILEFINVDDFVKVSYEQDRFDNKFINLADRVKKARQGFVETLTLDPVPVETIGRDG KSPTTITVDDEVANAKEKIGYIHFKDLALAHRDQDVIDKLYNYYHLLNASMTYRQTPSFE NGPVYNLYPGETYEATSKLPQITVHMTGSQTGIDLYSYAVKFLGNPYVFGGEDLYNGIDC SGFTMRVYQTIGIGLPHFAQSQQRYGIEVPFGQEKAGDLVFFGSSLDNITHVGIADGYGN MVHASSPRVGIIISPIRNPISIKRIVN >gi|229269867|gb|GG666044.1| GENE 107 129213 - 130220 1382 335 aa, chain - ## HITS:1 COG:SP1027 KEGG:ns NR:ns ## COG: SP1027 COG4086 # Protein_GI_number: 15900898 # Func_class: S Function unknown # Function: Predicted secreted protein # Organism: Streptococcus pneumoniae TIGR4 # 76 279 88 290 324 104 33.0 3e-22 MKKKIFGLVLSFSIILSNVAYAVGFDKDKDDVIYGVALNDQQRKIVDNAVEINSEDFNVG TVNGADLEKYLGYGTSDSNMISSIVVKRLEKGSGIRVMIKTPGNINQITEAQYTNAAITA GLTDAEIFVASPKPVTGESALVGVYKSEELHGTKLDPQRTKTAQKELKTVIEVSKENESN PNFDSKKLDRAVIEVKEKLADYKEKNGQTAPEDKILVFVLNALENVDMKDVLSDENLNSL ITYFKSYQDLSGITNPEVRDNLFKLAKDIGGKAGKFYEDNKESIDKFAKDNKENFEKIAK DAKDSGLLDKVINFLKDVVNSIIKVFSKDSDSSNN >gi|229269867|gb|GG666044.1| GENE 108 130217 - 131011 1102 264 aa, chain - ## HITS:1 COG:AF2269 KEGG:ns NR:ns ## COG: AF2269 COG0489 # Protein_GI_number: 11499850 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Archaeoglobus fulgidus # 20 243 16 240 254 205 43.0 6e-53 MTNKTPNFDKFKIETQPGTQIGKIIAVMSGKGGVGKSSIASQLAVGLKNKGYEVGVFDAD ITGPSIAEAFGIDEPVMATANGIINPAVAKNGIKLISTNMIIPNKTDPVVWRASIVTGVI KQFYTDVDWGKIDYLVVDMPPGTADVPLTVFQSLPIDGVVAVATPQGLVEMVVEKSLKMA KMMGKNIIGIVENMSYYECPDCGSKHAIFGESNIEGVAEKYGVDTIVKLPIDPSVAAKID EGKACDINNDLLNPILEKIEGLKK >gi|229269867|gb|GG666044.1| GENE 109 131479 - 133053 1878 524 aa, chain + ## HITS:1 COG:SPy0277_2 KEGG:ns NR:ns ## COG: SPy0277_2 COG0765 # Protein_GI_number: 15674455 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pyogenes M1 GAS # 291 504 9 220 239 231 56.0 2e-60 MKRLVNLLLAIILLFPIGNTYASEDVLRVGMEVNYAPYNFSETNDSNGGVPVANSPGEFA NGYDVRFAKNIADKLGKKLEIYKIEWDGLIPALTSGKIDAILAGMSPTDERREQIDFSLP YYRAKMVVVVPKNSKYINAKSINDFKGAKITGQLGTFHADVVDQMEDVDKQEPMDSFPTM IAATNAGTLDGYVSEEAGAESAISSNPNLTYIKFDDAHNFKTSDSDTTIAVGLAKGSPMT EEINNYLKDLDIDKVQDEIMTEMVAITTKDEAPKSFITEVKDIWNKYSSLFLKGVVNTLF IAILSTILGFIIGLLVAIIRRIDVNKKTNPIGFYFHKLVNILLSVYVEVFRGTPMMVQSV IIFYGLKQYFDIDLSTMFAAILIVSINTGAYLSEVVRGGINAVDSGQFEACKAIGLTNWQ AMTGIILPQTIKTILPSLGNEFVINIKDTSVLNVISVTELFFMSKSIAGSTYQYFPTYLI TAVIYLVLTFTITRLLLLIERRFNDRDFILESSTGAINVNTQSK >gi|229269867|gb|GG666044.1| GENE 110 133031 - 133765 561 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 240 1 241 245 220 46 7e-56 MLILKVNNLEKKFGDNLVLKDINMEVEKGEVVTIIGSSGSGKSTLLRCLNLLEEPTSGEI IYEGDNILDHSFDRRKYRSKVGMVFQNFNLFANKNILENCMVGQEKVLGRSKEEAKATAM KYLESVGMAQYINAKPSQISGGQQQRVAIARALCMDPDVLLFDEPTSALDPETVGEVLDV MTSLAKSGMTMVVVTHEMDFARDVSDRVLFMDKGIILESSSAKDMFENPKHERIQEFLKR FLNN >gi|229269867|gb|GG666044.1| GENE 111 133765 - 133929 64 54 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485355|ref|ZP_03915671.1| ## NR: gi|227485355|ref|ZP_03915671.1| hypothetical protein HMPREF0072_0758 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0758 [Anaerococcus lactolyticus ATCC 51172] # 1 54 1 54 54 77 100.0 3e-13 MTNITNFKIGNFLNPTYKKNLIKKIKVDKLGIFLAYLLFVEIFSFFIKLGGYYE >gi|229269867|gb|GG666044.1| GENE 112 133922 - 135421 1484 499 aa, chain + ## HITS:1 COG:CAC3047 KEGG:ns NR:ns ## COG: CAC3047 COG0728 # Protein_GI_number: 15896298 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Clostridium acetobutylicum # 4 456 13 466 520 139 24.0 1e-32 MNNTLILMVLNLIGKLFSFFREMVFSYFYGTGAITDAFNTSTTAATLIFSVITYALSKTY IPTFSKISKERGEAEGDAFTNKLLNFSLFLCTVIMILGLLFALFIVKMFAIGYDGEKLKI ASLFMRAVILTMYPNIYAAIFSSYLQIKGDFITPAFPLLILNIILGITVAFSKGNIYIMA GGIFLAYFIQFAVFPKRIKETGFKRKRAKAKIDEDIRTLIKLSIPTIFSMAAVYISTIVD QSFASIVANDGGVSVINYSLKILRIVSSTFIVPFQITAYPLIGKLAAEGKFDEVKNITSK TLVKIMILFIPSLVGLMVLSRPIISFVYMRGAFGYDDMVRTADVLFYYTIYLIGPAVADL LYLSFFSVQNTKIPTIISFIQLCVNVFLDYALNGKYGLVGLALATTLSQFVLVGLAIIMY RKYFGKLNHAYIIKNIGKIAIGGLALGFVTNYTYKLRPSNSWLLVTILCGAIVYLAIIFA LKVDGADELKEKFLKKIKR >gi|229269867|gb|GG666044.1| GENE 113 135560 - 135850 210 96 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTQNHPTKATMETSRRFAHSRWVSPAMSSIARHLHSSLHEWFRLYIVNTLIKIISKTIS RCKHNPPDKGDYGDLLSLRSLEVGVTCHVEHRETSP >gi|229269867|gb|GG666044.1| GENE 114 135774 - 136034 106 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METSCRFAHSRWVSPAMSSIARHLHSSLHEGFRLYIVNTLIKIISKTISRCKYKIPQNKG DYGDLSSLRSLVVGVTCHVEHRETSP >gi|229269867|gb|GG666044.1| GENE 115 136093 - 136377 254 94 aa, chain - ## HITS:1 COG:CC0707 KEGG:ns NR:ns ## COG: CC0707 COG2827 # Protein_GI_number: 16124960 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Caulobacter vibrioides # 2 94 5 95 96 71 40.0 4e-13 MYYVYILLNKSNDRTYVGHTDDLKKRIWEHKNHVNPYSHTAKYNITKLVYYECGEDFYES RAREKQIKKYSRLKKYALIEKENPYFRELYYDLF >gi|229269867|gb|GG666044.1| GENE 116 136392 - 137633 1674 413 aa, chain - ## HITS:1 COG:YPO1009 KEGG:ns NR:ns ## COG: YPO1009 COG2195 # Protein_GI_number: 16121311 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Yersinia pestis # 6 403 5 400 410 391 48.0 1e-108 MNEKVIKEKLVEYFLRYVAIPSQSNDRNLQVPSSDGQLALGKALAADLKKLDLEDISINQ YGVVQARLPKRGDKTKKLGWVAHLDTVDVGLSDEIHPQIIKAYDGKDINLRRDVVFSTKD NPEVLSYIGDDIIFTDGSSVLGADNKAAIANIMTALWFLKENPDIDHAEIYIAFVPDEEI GLRGSRKIDFDKFKVDYAYTIDCCELGELIYETFNAASGTLKIKGVPAHPMSAKGNLVNP IMIAHDFIAMLDRAKMPENTENREGYVWVTDINSDVLNLSLELNIRNHSREKFEASKDYL YKITEIIKERYKKAEIEIEIKDVYANIADSMDEGNKIAVERLREIFDRLGIEPKIIPMRG GTDGSFLSTVGIFTPNYFTGAHNFHSNKEFLPISSLYKSFLVTLELMKDRDYI >gi|229269867|gb|GG666044.1| GENE 117 137709 - 138977 1346 422 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485359|ref|ZP_03915675.1| ## NR: gi|227485359|ref|ZP_03915675.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 422 1 422 422 569 100.0 1e-160 MKKILILTLLALGLVACEGKDLDDPRVKDALNQAKLDVNTEDDQASDEEDKQDDQKENED ENENEDEDINRTYPEDEIKKDVISVESSPKKDEEDSKEDEKEDLETPKKEKSKKKKDKAK SGKDEKEKKKALTADDYFFSYYSLVTVRNGKVISALDDKDDDNNGYYIDYVPFSNNIFVV GSAIDKKFSIKKINGQDLTLMYDFKEGETFYPLAMIDDKIYGRYQYYENYDMKKNSDFVS EKSGIGVVDLKTGKLEVFKATHTKSNESLLGQGISDKEILFTKMKDDQKINLYKLDLEKG YDQKAKLVEENTEASFFLSSKHFEKDKAIYEIFKSKGNEIEIKGEKYTINDDKRMTLIGQ NLIIQEPTKFDDTKYLFKMDIINYLTGDVVEKDLESYGYRVYKGKLYYIDYDKKVQSLDI GL >gi|229269867|gb|GG666044.1| GENE 118 139099 - 140133 813 344 aa, chain - ## HITS:1 COG:SA2057 KEGG:ns NR:ns ## COG: SA2057 COG2348 # Protein_GI_number: 15927842 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Staphylococcus aureus N315 # 12 219 9 223 421 72 22.0 2e-12 MILDKDNKNLLKKYNNFIKNSPYGHFQQDIRWAELKSGWESVYFYIEEAGDIKAGLSVIY IKDKSVGKNFFYGPRGPVCDPKNVEDFCKLIEEASDFARSNDGFLLRIDPYLPHDEGLEK SFEEHGLNFRRDKTRSSQPLLNMVLDIDGRSEEEILSSFSKNTRKHLKKSYRDGIITKTL AEDGIDILYKQIEDTAVRAKIGHRPYEYFKTLYELFKDEIRLSVGYYQEEPVCSSLLLCY GNRATSLYGGSNDDYKSMGQNYQLNFEEIKYCIDHNISYYDMGGIFETDGSDGLYNFKKK FTEDNVFESIGELDVVVDHEKYELYMENLNPHFKREEEELNRNS >gi|229269867|gb|GG666044.1| GENE 119 140309 - 140758 531 149 aa, chain - ## HITS:1 COG:L0288 KEGG:ns NR:ns ## COG: L0288 COG0494 # Protein_GI_number: 15673103 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Lactococcus lactis # 5 138 11 144 155 91 38.0 4e-19 MKTVLMNMVKIYNKKTGQVLVLDKVKKYGWEGLTFPGGKVEFGESFVDSVIREAKEETNL DIKNPKLVGIITWISDEGKDVGLIYETTDFDGELVEENREGRLFWMDYEEFKNIQPKSMS MDKILGIYEGDYREVFWDFRNGKEEIFYF >gi|229269867|gb|GG666044.1| GENE 120 140863 - 143982 3604 1039 aa, chain - ## HITS:1 COG:CAC3038 KEGG:ns NR:ns ## COG: CAC3038 COG0060 # Protein_GI_number: 15896289 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 10 1038 7 1033 1035 959 46.0 0 MCDLKFEEVNSKDVKSREAKLKDYWNEIDLLGETFKTRENADEYVIYDGPPTANGKPGIH HVIARTLKDMTSRYKNMKGYKVLKKAGWDTHGLPVEIEVEKQLGFHDKNDIEQYGIEKFN HLCKESVWKYSDMWRDMSDRMAFLYDMDHPYVTMDNNYIETEWWLLDQAFKKGYIYEGAK VMPYCPRCGTGLASHEVAQGYEFEKTLTLTVRFKKKGASNEYFLAWTTTPWTLPSNLALA VNPDLDYVKVFDKEDDCYYYMAKSLMAKLMDKRDYEVVEEMKGTDLELLEYEQLMPYVKT QPGKAFKVILADYVSAEDGTGIVHIAPAFGEDDYQACRKYDLDFIQPVDLEGRFTETPWK GEFVFDTNEKIWRHLQEEGKVFAKETMEHNYPHCWRCHTPLIYYARPSWYIEMSKFSGKM VENNQTVNWFPQTIGDKRFGNWLENVKDWAISRSRYWGTPLNIWRCECGHTDTVASRAEL KERAIEDISEDIELHRPYVDNVHIKCDKCGGTMTRVPDVLDVWFDSGAMPFAQLHYPFEN KELFEKGYYPADFICEGIDQTRGWFYSLMAISTITMGRAPYKNVLVNDLVVDKNGQKMSK SRGNTLDPFALFDKYGADAVRFYSLYVSPAWMQTKFDEKGLVEVKNNFFRTFENVYNFFS LYAGTDGLTLADIKSFEGVKVDGIDRWLYSRLNSLIKSYYEEMENFEYNKVVHEISDFVV EDLSNWYIRRNRKRFWSQELTDSKKSVYKTTYDVLLSLSKLIAPITPFLAEEIYQKLTGG KTVHTEILPQVDESLIDTKLEADMDLVRKIVNLGRASREKESIKVRQPLSKIIVDGSYKE RLENLLGLIKEELNVKEVDFEDDLSAFMDYFLKPDFRVVGRIFQSKVNDFAKYLANTDAK TFIDQVNEGPVKVEIGGEEFEVSKDYLDIRITAKEGFDVEIDGNVFVILDTEITEDLKDE GYAREFISKIQNLRKDSGFEVTDRINISYDADADLAKSLDKFAEDIKKETLADKLEQTNL DVNPIELNDKEIKISLERL >gi|229269867|gb|GG666044.1| GENE 121 144225 - 144716 768 163 aa, chain - ## HITS:1 COG:no KEGG:Apre_0283 NR:ns ## KEGG: Apre_0283 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 163 2 161 161 217 73.0 2e-55 MLKDKFVDLAYDSLRYYLETGKYLDEYDEEFKDNHNGVLIQISKGDRHERSGSIYPTRAN IALDIIHEVVNLGVFDNAFALKLSDLDDIYIQVLEINKVEQIENIEDFGVYSGLLLSYAN NPVIVFREEYETDYQMFEDAKDLANVDDFNIYTLEKFKIIRHI >gi|229269867|gb|GG666044.1| GENE 122 144709 - 145191 604 160 aa, chain - ## HITS:1 COG:SP0313 KEGG:ns NR:ns ## COG: SP0313 COG0386 # Protein_GI_number: 15900246 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutathione peroxidase # Organism: Streptococcus pneumoniae TIGR4 # 1 158 1 158 158 201 58.0 4e-52 MTTIYDFTVKNDKGEDVSLDKYAGKVLLIVNTATKCGFTKQYDGLEELYKKYKDRGFEIL DFPCNQFAGQAPGTIEEINNFCELNFGTSFDRFDKIEVNGENEAPLYTYLKDQISGKISK KIRWNFTKFLIGKDGVPVKRYDSMKKPANIAKDIEGLLDA >gi|229269867|gb|GG666044.1| GENE 123 145291 - 146175 1295 294 aa, chain - ## HITS:1 COG:RSc3386 KEGG:ns NR:ns ## COG: RSc3386 COG1464 # Protein_GI_number: 17548103 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Ralstonia solanacearum # 52 292 291 529 529 184 45.0 1e-46 MKKISKILIAILALASFTACGAKNQEAKAEKAPEQTKTEAASEDKFKDKDVIKLGLIGEN NEDWEDAAKRFEKATGKKLEIVKFSEYREPNEALIAGDIDINAFQHKKFLEDFNQASGSD IVSIGDTAIAPLGIYSSKIKDIKDLKDGAKVTIPDDPSNGARALFLLQSAGLIKVNGKEG DAITPADIKENPKKLEIIELSAAQTARSLDDSDIAVINSGMAVDAGFIPTRDAIFLEDYK DPAKAIYVNIVACLKENANSATLKDLVENYYQTAETAKIIKEKTKGSSVPVFDY >gi|229269867|gb|GG666044.1| GENE 124 146556 - 147434 1417 292 aa, chain - ## HITS:1 COG:L118475 KEGG:ns NR:ns ## COG: L118475 COG1464 # Protein_GI_number: 15672301 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Lactococcus lactis # 54 292 40 281 286 202 47.0 4e-52 MKLTSKIALALGLIVTLTACGSGAEKKEEAHKEEAKTESKDTGETAKSTDPVHIKIGVVG EYNEVLEEVIKRYEKGTGNTVELVKFSDYAQPNEALLAGDIDLNAYQHYKFLKEFNEDKG SDLVSIGDTMLAPITLYSHKVKKLEDIKEGAKIAIPNDPSNGSRALFLLQDAGLIKVEGE PGDTIGVDKIKENPKKLDIVEMDASQTARSLDDVDCAVVNDTFALDAGLDKNEGIYVENP KSDSVKQYINLIAARKEDENNEAYKEFVKYYQTDETKADFERITKGAWIPAW >gi|229269867|gb|GG666044.1| GENE 125 147502 - 148167 915 221 aa, chain - ## HITS:1 COG:L122401 KEGG:ns NR:ns ## COG: L122401 COG2011 # Protein_GI_number: 15672305 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Lactococcus lactis # 21 221 30 230 231 173 55.0 2e-43 MGFFSYSLSIKDRIISDFKVTLYMLVISAIFAGILGLILGVIMVVTDKDRILENRIIYSI LDKLTNLFRAIPFVILLALIAPFTKAIIGTRIGATAAIVPLTFSAVPFFARQVEQALADV NSGKVEAAEAMGLSPVEIITRVYLREGLPSLIRVSSITLISLLGLTAMAGTVGAGGIGDL AIAVGYQRYKDDVVIVSVILILIVVYLIQGIANYLIRKTSH >gi|229269867|gb|GG666044.1| GENE 126 148154 - 149185 1047 343 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 1 336 5 350 354 313 49.0 2e-85 MIELKNITVDFDGFKAVDDVSLTIKEQDTFGIVGFSGAGKSTLVRTINLLQRPSKGQVLI NGENLLDLSNKDLRARRKKIGMIFQHFNLLNNLTVIDNVIFPIKKDKSLSKEEKRKKALD LLETVGIKDKANAYPSELSGGQQQRCAIARALASDPEILLCDEATSALDPKTTKQILKLL KDLNDKLRLTVVIITHQMDVVKDLCNKCAVMQDGKVIECGSTLDIFSDPKNKLTKEFVET STNISETIDEVKSNIGILKDDEILAKLSYLGQATTEPIINELFEKFGVRTNILAGNIEFI NGTAVGNLIVSFKGDDDKLVEVSTYLKDKGTNLEILGGKDGIF >gi|229269867|gb|GG666044.1| GENE 127 149182 - 150387 1435 401 aa, chain - ## HITS:1 COG:PH0722 KEGG:ns NR:ns ## COG: PH0722 COG1473 # Protein_GI_number: 14590599 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Pyrococcus horikoshii # 5 395 9 386 388 208 35.0 1e-53 MTLGDKINQAIKLNKEDIIKTRRYLHENPEVSSKEFETSKYLKKRCEELGFVVEDVPGST GFTALFDTGRPGKTLGIRTDLDGLAIQEDPYNLKEKKLVVSKNPGVSHACGHDSHMTVAV IAGKILKDLADEISGKLYLIFEEAEETGAGIDAMLEHLKDKGLDAVYGNHQSPALDVGKF SIVEGPAYAGCAGVDFDVIGKGGHGSRPDKAVNPLIATAHIITGLNSAWNNQLDLEKPVS LGIGAINGGSAANVICDRANVKGTLRFFDLDEGKKALELLKNIADLTAKAHGCSVVFNDY SKIVAEPVINDENLAKKVKESLKSLYEDALIASPKLWISESFYGYSKLCPTIFVNFGTRN EAEGKASDLHTAKFDLDERAIDYALGLAIKFAIDFLKESDK >gi|229269867|gb|GG666044.1| GENE 128 150732 - 151889 1133 385 aa, chain - ## HITS:1 COG:TM0445 KEGG:ns NR:ns ## COG: TM0445 COG1160 # Protein_GI_number: 15643211 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Thermotoga maritima # 12 382 9 397 404 232 38.0 9e-61 MTSISKTSLSERVYIGIFGKTNSGKSTLLNYLTGQDAAIVSPIEGTTTDPIRKAMEITDF GPVVFIDTAGTADETQLGKERYEKTLAEIDKVDVFLYVLSSGDDLEIIPKFKDKPVIYMA MKVDTGEGSQILKAFAGKNPIGVDLASTKSRDEIFSKIKALYKKEDLTITKNLVKKGDMV VLVMPQDAAAPKDRLIKPQVMTIREIIDKGASAICTDLSNFETTIKSLNKIDLIITDSQA FKEVYEKKPSDVKLTSFSVLFSAFKGDLEYFVESAKVLDGDIKNIIIAEACSHPPVDEDI GSVKIPKLIKRTHPDINIDFARGNDPIAYEKYDLIIACGSCMFNRTHVLSRVAKAKEAGI PMTNYGIAIAKLNGILEKISLPDEK >gi|229269867|gb|GG666044.1| GENE 129 151873 - 153291 1898 472 aa, chain - ## HITS:1 COG:CAC1356 KEGG:ns NR:ns ## COG: CAC1356 COG1060 # Protein_GI_number: 15894635 # Func_class: H Coenzyme transport and metabolism; R General function prediction only # Function: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes # Organism: Clostridium acetobutylicum # 4 469 2 469 472 628 67.0 1e-180 MTKYDPASTHAEEFINHEEILETLAYGRENAHNRKLITELLEKARKAKGLSHREAFVLLS CKEDDLNEEIFKLAKDLKHKFYANRIVLFAPLYLSNYCVNGCVYCPYHGQNRSIPRKKLS QEEIKEQVIALQDQGHKRLALEAGEDPINNPIDYILESIHTIYNIKHKNGAIRRVNVNIA ATTVENYRKLKEAEIGTYILFQETYNKENYEALHKFGPKSNYAYHTEAMDRAMEGGIDDV GMGVLYGLDSYEYEFIGQLMHAEHMEARFNVGPHTISVPRIQPADDIDPDDFDNSLSDDM FAKLVACIRISVPYTGMIVSTRESEAMRNRLLELGISQLSGGSKTSVGGYTEHETKGSDQ FELADNRTLDEVVNWLIEKDHVPSFCTACYRKGRTGEVFMGMVKKHGIGNICHPNALVTL KEYAVDYASEKTVANADMLIKRELENIPNPEVRENTRENIKRVEEGQRDIYI >gi|229269867|gb|GG666044.1| GENE 130 153791 - 154816 1042 341 aa, chain - ## HITS:1 COG:TM1269 KEGG:ns NR:ns ## COG: TM1269 COG0502 # Protein_GI_number: 15644025 # Func_class: H Coenzyme transport and metabolism # Function: Biotin synthase and related enzymes # Organism: Thermotoga maritima # 18 305 26 310 348 260 46.0 3e-69 MRKREINHIDDKTLKKWIEDEAMTDILAQRADVIRRQVYGNKVYLRGLIEVSNICKNDCY YCGIRKSNTHVNRYRLGKEEILNSARFGYELGFRTFVMQGGEDPKFSQDFMVDVLKSIKE AYPDVAITLSLGERSYEDYKAFFDAGADRYLLREESSNPAHYDKLHPKEMKLKNRQECLY NLKKIGYQVGGGFMVESPYQKTEDLIADIRFLEELEPDMVGIGPYLVSHDTPFMDFKNGS FTKTLRLVAILRIVFPYALIPATTALGTVNPKGRELGLKAGANVLMPNLSPKEAKKAYNL YDNKLNTGLEAAEAKKQLEKEIASFGYQVVDDRGDVSDFGK >gi|229269867|gb|GG666044.1| GENE 131 154921 - 155574 601 217 aa, chain - ## HITS:1 COG:no KEGG:Apre_0269 NR:ns ## KEGG: Apre_0269 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 8 215 1 204 204 124 36.0 3e-27 MHTGWWTMYKEGFGNIPNKDKVRNMLDEAFKKSPGEWIIHSHIIGKTSEKIARELGLDPE IAYAVGCLHDLGKGYGYRDMAHMMEGYRILRFEAYFYPARIALGHGFVTGEISSYHGKRN VSKRDEDFIIAYLKKREIDEYEKLIILLNNLIKGRYLGLDEREALRNIAKTPEREERLKI LKGWQDDLEAKLENPIKTYLPRPRSYKFPYNLLRNEK >gi|229269867|gb|GG666044.1| GENE 132 155546 - 156235 779 229 aa, chain - ## HITS:1 COG:CAC3591 KEGG:ns NR:ns ## COG: CAC3591 COG3884 # Protein_GI_number: 15896825 # Func_class: I Lipid transport and metabolism # Function: Acyl-ACP thioesterase # Organism: Clostridium acetobutylicum # 18 213 21 226 248 68 26.0 8e-12 MDYTKTYKVRSMFTNENGIITLRSLTGLMVDLAFGQAREVEKDLAEMDDKTWLLYSWDIE IIKQIREGFNIEITTIPTHMKRFYAYRNFLVKKDGEIFAKAKATFILFDKEKQRAGIIDS KVLEAYGQSAETYSGRAYKKPDVYEKVKEIAIRRADYDGNHHVNNGVYFDYIKEISGLDE GRISYVKMIYKNQIRSEQKVGLFYKKSEKQVDFKIGSEIDHAYGMVDYV >gi|229269867|gb|GG666044.1| GENE 133 156276 - 157478 1485 400 aa, chain - ## HITS:1 COG:slr1751 KEGG:ns NR:ns ## COG: slr1751 COG0793 # Protein_GI_number: 16330090 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Periplasmic protease # Organism: Synechocystis # 59 399 76 417 423 221 37.0 1e-57 MKKFGKVILSVVLIGAIGFAGFMLGSNVDLGQGGTTRDKELISEMDSLKGLLDKNFLFDY KDEDLYNGALKGMFANLGDPYTSYYPKEEFSKLMENLDGRYKGIGVTVSPSKEGLIKVVQ VFENSPAKEAGMKAGDFIKSVEGNVFDATQLDKAVALIRGEPGTKVKIEVLRVSEDKPEG ELIPMLVERRDVTVDTVYTKTLNISGKKIGYLRLSAFDDITWDDFKEKYSKLKNSDIEGM VLDLRNNPGGALDVCLDIADTFLDEGVIVTTEDKNGNVITEKSDSNKDDIPMTVLINENS ASASEILAGAFKDRGRAKIVGTKSFGKGIVQKLFPLENGAGAKITISEYKTPNGNKINKI GVKPDIEVENKNQELDLNNNNFKKDQQFLKALAELLKEIK >gi|229269867|gb|GG666044.1| GENE 134 157657 - 158646 1044 329 aa, chain + ## HITS:1 COG:FN1279 KEGG:ns NR:ns ## COG: FN1279 COG0491 # Protein_GI_number: 19704614 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Fusobacterium nucleatum # 3 329 2 326 326 250 38.0 2e-66 MQITEVYKNIYQAIFPLTGNPLKSINIYVIKANDFAMIIDTGFNNPENRANMEELIHRLD LNLPKTKLFLTHLHSDHVGLAKWLEDKGIGDIYISEKDGKMVENGINKEDFQWQNIIKNA HFQGLGPENLKIEDHPGYKNRPKEAFPHTKIKPGWEIAIGDYNFVAIDEEGHTPGMLGLY EKDHKILFCGDHILGKITPNITYWGDEFGDSLGIYLKNLEKIKDLDIKHLYSAHRFLVED TNARIDELIAHHKERLTDCLQIIKKLKRANTTQITQQMQWDIKAKDWNDFPASQKWFAVA EAAAHLKHLVKQGRIKEEVIDGVGFYSII >gi|229269867|gb|GG666044.1| GENE 135 158789 - 159373 586 194 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485379|ref|ZP_03915695.1| ## NR: gi|227485379|ref|ZP_03915695.1| possible resolvase [Anaerococcus lactolyticus ATCC 51172] possible resolvase [Anaerococcus lactolyticus ATCC 51172] # 1 194 1 194 194 325 100.0 1e-87 MVIYIYSKTSEKKSVFEDVIEIIRENAKEIIVSIEHNRNFKELENIKKEMVDTDILLIGS LKSLGITNTDIANELDYFIRNGKFLVVCNIESTYKYGIGQPMNRAILKTILDSIALNNNI VRINSNKKSNVGRSKIEFPDNWEDLYEKWEKEEISSKKFMEESGLKKATFYNMVTEYKEI LRANADFVKKFKLA >gi|229269867|gb|GG666044.1| GENE 136 159375 - 161471 1809 698 aa, chain - ## HITS:1 COG:no KEGG:Lebu_1231 NR:ns ## KEGG: Lebu_1231 # Name: not_defined # Def: hypothetical protein # Organism: L.buccalis # Pathway: not_defined # 21 631 11 674 761 74 22.0 2e-11 MDQMSIFEANQMESLKLIEGDNREDIDNKHKIYHTKYIDTSYEDIYDLFSDFDEIRAITF SYDIKFIDKIMKMFDYGEIILGARFMSRRDDDLHKLVGEAYALAEAMTISEIAADAVREK NDLVERMSKNDLLIRSPLYLIDHRKIYLLRSDDGRTRVIKGSVNMTGSAWSNNQLENIEV DDSLEGYEAYLRDFETAWDLSADIPEDVVVCKKTNKPENDIGFIKAAIKTREAIVLEEKP KDKVSYEDIRYTIEVEKTYQKNKELVAGLKPDVRDGKVLIIPEKLNRVINNRKVIERKKV SIEERIKSYPSLTFNYDTKEAFINGEKQNLNPDKEDVKKDIDLLFDAMDNYERDFIGDTE RVRENHYKLLNILFSSPFHAKLRCVADSQNIPTSSLPLYTLITSTGANTGKTFMTKLILK LMSGKDLDGFDTNSIPTKDINPIIQEYKGMPIFVDEIDQTYYSRLTANIKNSSLCEKKNL AQEPLFIFAGNRLRDPEEPERKRMPFLSYDTNLKSDIDPMAYQARGRKIQRQAGNALYRE YLRRMLDEVNDIIDFMFESDNKDDGYYPDITNISSKVLIEIFKDYGYELPPYVREFKWND DFSYNAKYISEDAIEGIRKMWEVSAKNFKVKYSQVLIESGKDTASKRKLTSWANSLPPEF EANFSENRDTSSLTINRKELEKRLGFKFGFLDRLRGGL >gi|229269867|gb|GG666044.1| GENE 137 161607 - 163019 795 470 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 5 455 4 456 456 310 37 5e-83 MEIFKNILSTVNGYLYYPILIIILLACGFYFTIRTGFIQLSLLPDAIKVIGEKPAGKDDV SSFQALMVSTASRVGTGNIVGVSNAICLGGPGAVFWMWIIAVIGGASAFIESTLAQIFKK KAKDGSSYGGPSYYIEQGLGSRKLGVVFALALILTYAVGFNMLASFNLQDSFRVYDFYQK GKTSWIIGGILAIIAGYCIIGGGKRIIKYTSIIVPIMGIIYVLMSIFMIGINFSNIGKMI KMIVEDAFNFRAIFGGVAGSAMVEGIKRGLYSNEAGMGSAPNAAASAMVSHPVKQGLVQM VSVFIDTLIICTATAFMALVSGVAPTEDLAGAGFVQEALATVVGHFGYVFITICLALFAF TTLLGNLYYCDSCLAYLKKKEPSKNFMLVFRIIATILIFLGAGMEMKFAWDLADLFMGIM AIINIFSIFALGKYAIKALEDYEKQRKENKDPVFKSSHIGLDENRLDFWK >gi|229269867|gb|GG666044.1| GENE 138 163360 - 163905 628 181 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485382|ref|ZP_03915698.1| ## NR: gi|227485382|ref|ZP_03915698.1| hypothetical protein HMPREF0072_0785 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0785 [Anaerococcus lactolyticus ATCC 51172] # 1 181 1 181 181 285 100.0 7e-76 MKKVLNKKMIGLCCLLFVFLAFFLAKAYANKTGGYEIRMDIKMSKGQEKSLILPSKRQVA YWKIEEGKMGPWDVMRLAKDCDLMSLGEISKKLGKEPKYSDKAEIFYDGKAYDKMTSAMY EKNKAKIKEEIRIRNLEEGAYLIKETDESFKQSKAREKLTTRIEYVGKESAPEGVLELED N >gi|229269867|gb|GG666044.1| GENE 139 164021 - 164851 793 276 aa, chain - ## HITS:1 COG:SP0468 KEGG:ns NR:ns ## COG: SP0468 COG3764 # Protein_GI_number: 15900384 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 34 217 46 231 283 127 36.0 3e-29 MVGLVLLTSPLVLRSYHDFMAKSERMSFEKIQASKTDAEIAEENKNAQTYNEMIKGTDPS VEDPFTSKDYENRYEMFRTTNTPFAYLSIPKLDKYLPLYLDATYEHIAKGVAQVAGTAIP VGGKGTRSAIAGHRGWWGDTMFLYVDELKNGDYIYIERANQTMRYVVSDKEIIGPYDWDK LAPRGDLDMITLLTCSPFLPPRPNRLLVNAIRDESGPAEEFKLPSGDFVASANDASKGNI LVKIMKIATLIGAVIGILAIVYTGLRFVKRLKAGFC >gi|229269867|gb|GG666044.1| GENE 140 164880 - 165749 1199 289 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 19 283 1 266 279 263 48.0 4e-70 MSKRTRDRIVFMGIFILGLLIFSYPLISQKYYEIKAEDDVITFVKAAKELAPEDLDRRMA LAAAYNRTLDPSRLADPYTDMEKAGRAEYARMLEVEEMVGHIKIPKIKVDIPIRAGTSED VLQKGAGHLEGTSLPIGGNSTHTVITAHRGLPNAKLFRNLDQLAYGDVFYITNIKETIAY KVDKIQVVEPSDFEPVLVVENKDYATLLTCTPYMINSHRLLVRGVRIPYQEAIDDGVANM PRARVDFFRMVLVLIPIIIILTLTLFREKKRTDSLSKELREIEERNQIN >gi|229269867|gb|GG666044.1| GENE 141 165742 - 166713 898 323 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 30 284 3 257 279 334 59.0 1e-91 MAKKKAKRKKVNKKKSRWLFRLIFLLGFLVMVYPLISRFYYRIESNEKVETFSNEAKKLD TKEIDRRINLAKAFNESLTGKIASDPYTRKKQEEGRKEYARMLEVEEMIGTVDIPKINQK LPIYAGTSEDILQKGVGHLEGTSLPIGGNSTHTVLTAHSGLPEATLFTHLNQLEIGDKFY IENIQGIIAYQVDQIKVIEPSNFDDLLISPGHDYATLLTCTPIMINTHRLIVRGHRVPYV PAVDEESIRENRNNWIFRMLFFASLILILILLILILKLRRDNKKYFKKISEFTKGGFIKS KLRNPTGQGDLFENLAGEDDDYV >gi|229269867|gb|GG666044.1| GENE 142 166841 - 168313 1400 490 aa, chain - ## HITS:1 COG:BH2014 KEGG:ns NR:ns ## COG: BH2014 COG4932 # Protein_GI_number: 15614577 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Bacillus halodurans # 94 408 1372 1631 1816 93 30.0 7e-19 MGKSKTSKLVYDNVAYDEIDTRKIENFDVDKLSEQILIDNLDKGFYLIKETDESKKILNK QLVPSIVRLPDDETNNNIRTVIAKEVKKVKTDIIKLIKVDADNKNIRINKAQFKLYQKIK DGNEVKSIPVKVTGEKGKYTRDDEKGADINLETWDNGEIIVSNLLEGVYYFKEVAPAPGY DKANVGKISEDLKPGGEPFVIKNKITPILKKIDAADKNKYLKDAVFKLYKKDGTILKFKK SGVYYELDNSGKEEIVTDENGLIYISDLKDGDYYFEETKAPKGYQLSKTKIEFKVKDARA VDDKGDIKILIVENTPDKPNPKTPTGGFNFVKIDDSKDEKRLAGARFVLMKLDEKTNKYE RVVKDGKQITLESGNNGEFRVDGLEYGRYAIREEAAPTNYYIDNPLTYFDVDAASISLPA KKIVNKPYKPVITRRDNTTVTKYVPTNATTVIKNIVKTGDVKIIIMAIAGLILLTMGIKL VNNSERLQMA >gi|229269867|gb|GG666044.1| GENE 143 168256 - 168663 272 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485387|ref|ZP_03915703.1| ## NR: gi|227485387|ref|ZP_03915703.1| hypothetical protein HMPREF0072_0790 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0790 [Anaerococcus lactolyticus ATCC 51172] # 1 135 1 135 135 216 100.0 4e-55 MKNILKSRYISFILALFMVVGVFLPQGRVFADNSGKYTINLRIDVNEKEKLKEKIKGGGV IKSSARQVKVYKLKLDEHITNSKLIELAQSFYRSADKELNIADVEKNLIMIKFLSKTWVS LRQASLSMIMSPMMK >gi|229269867|gb|GG666044.1| GENE 144 169299 - 170537 596 412 aa, chain - ## HITS:1 COG:alr5319 KEGG:ns NR:ns ## COG: alr5319 COG4325 # Protein_GI_number: 17232811 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Nostoc sp. PCC 7120 # 42 407 61 439 449 84 23.0 4e-16 MSRFIILTVSLLLVTWIFDHQYIAIKSYIPKQLLLSVEVSVNFLSNISGIFLTISTFCFT IIVTVLNKYSSSISPRLLQSFIDRTGVLGLYGIFVSGFFYSVISILLLQDIAPDQHVVAG SFGIAYAIIAMLSFIAFSRQVLDNLKVSNIIEYIFNDCEKLIDKEVELREKAKHYEKGDE STKLSIVAENSGYLFEIKADEIFKELNGTRAELTINKRIGEYTIKGESIGELNIFQCELD DNDKNELKEKLSPLFLINVYNNTEEDYHRGIVNLTEVANMALSPGTNDPNTAIMCINKMS SLLGKLLSAGNHFIILKEDEDVKIIYQSYSVEDELYLGFSQIISYSAGDPLVTKAILQGL YIIYTMADICAKKSIKKFFDDSYEILIENFTHEIHLETFKRIRNNMEEQVSL >gi|229269867|gb|GG666044.1| GENE 145 170878 - 171081 139 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485390|ref|ZP_03915706.1| ## NR: gi|227485390|ref|ZP_03915706.1| hypothetical protein HMPREF0072_0793 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0793 [Anaerococcus lactolyticus ATCC 51172] # 1 67 1 67 67 131 100.0 1e-29 MTKCIGHFRDHSATARSWPLGQIVLPAMSNEIGLGLRVVGLPKARRASTKLSEKTQESFP EDTGKNG >gi|229269867|gb|GG666044.1| GENE 146 171083 - 171658 693 191 aa, chain - ## HITS:1 COG:no KEGG:Apre_0343 NR:ns ## KEGG: Apre_0343 # Name: not_defined # Def: KilA domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 191 89 279 279 302 86.0 4e-81 MTPGKWIESTDAVGIVSKAGRYGRTYAHYDIAMEFASWLSPEFKLYIIQDYKRLKEDENS KLSLTWNLHREISKINYKIHTDAIKEYLLKDLTDEQLSFKYASEADMLNVALFDKRAKQW REENPDLKGNMRDYASLDELLVLANMESYNAILIEKGLEQKERMIELRNLAKTQLISLEK LNQSDIKKLHK >gi|229269867|gb|GG666044.1| GENE 147 171772 - 171921 60 49 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0421 NR:ns ## KEGG: HMPREF0868_0421 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 49 1 49 88 80 87.0 2e-14 MSKIKKEKISAKGFDIEVYIEDFKNDYIILTDIAKYKNTDDPRFVIQNW >gi|229269867|gb|GG666044.1| GENE 148 172461 - 173336 641 291 aa, chain - ## HITS:1 COG:CAC0093 KEGG:ns NR:ns ## COG: CAC0093 COG0583 # Protein_GI_number: 15893389 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Clostridium acetobutylicum # 6 258 5 257 290 114 31.0 2e-25 MLDFRIESFLEVCKYMNFTRAAESLNITQPAISTHIKYLESYYNCKLFYRSKRNLCLTDE GKILKSALLSMSNDQDKLRMILAEEKTKSEKISLGFTRSVGEYLILDKLIALIKEKHSCD FHIYYENTDEILRDIDSGRIDFAIIEGFIKSRDYFIKKYKSDRIVCISHKDHKFKKQVKK LTDLLDERIIIREDGSGTLAILKNFLSMDNIDTKDFANIIEINNMRSIVEMLRSDCGVSF IFESCVKKELEEGTLMVVDLEDFNLVHDLSLVARKNSIFTDLYLQIAEAFY >gi|229269867|gb|GG666044.1| GENE 149 173442 - 174476 1258 344 aa, chain + ## HITS:1 COG:SP0034 KEGG:ns NR:ns ## COG: SP0034 COG2855 # Protein_GI_number: 15899980 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 5 344 4 336 336 287 53.0 2e-77 MIKSIEKNIKGIILCLIIAIISQIIGKKIPLVGPAVFGILIGMALGQIIKDKKPYMGGVR FTSKKILQYAVILLGFGLDLGIVLKTGRQSLPIILSTISTSLIIAYIAYKAGLIKGNIAT LVGVGSSICGGSAIAAAAPVIDADEDEIAQAISVIFFFNILAAILFPSLGRMIGFSTTDG HAFGIFAGSAVNDTSSVTACASTWDTIFNLGSQTLDKAVTVKLTRTLAIIPICLGLAFIR MRNAEQEANKKISIIQIFPFFIIYFILASLITTIALAKGVNIEFFKPFKDLSKFFIVMAM SAIGLNSDIVKLLKSGAKPLALGGVCFISITAITLILEKILGIL >gi|229269867|gb|GG666044.1| GENE 150 175459 - 175644 233 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485396|ref|ZP_03915712.1| ## NR: gi|227485396|ref|ZP_03915712.1| hypothetical protein HMPREF0072_0799 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0799 [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 99 100.0 8e-20 MKELDVVRLKEDYKEISKGTKGTIVLIYDNKNCEVEFFDKDGDTIDVVMTPLNKLELIES F >gi|229269867|gb|GG666044.1| GENE 151 175644 - 175976 399 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485397|ref|ZP_03915713.1| ## NR: gi|227485397|ref|ZP_03915713.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 110 22 131 131 186 100.0 3e-46 MKILKLMLDFGEGPICTEYFDEEKGRLLTGIEKVDNDKELWDINETIQELFTSYYHFDYN DQACFFDEEQEKKDKYKMLALLEKLKKRLYEINDGSFEIDDKETERVKNL >gi|229269867|gb|GG666044.1| GENE 152 176203 - 179628 1549 1141 aa, chain - ## HITS:1 COG:no KEGG:Moth_0643 NR:ns ## KEGG: Moth_0643 # Name: not_defined # Def: hypothetical protein # Organism: M.thermoacetica # Pathway: not_defined # 6 1131 7 1169 1183 242 22.0 8e-62 MIIKDIEYPELLIEAIKNDKLVIFCGAGISMSEPTNLPSFYQLSEKIAELTNKEKRNDES DEQYLGRVENLGHDVHSKVCDILSATQTQPNTNHEALIDFFKKDIRIVTTNYDSMLESAL EKKGRKARIYSYPALPYGDKFNGIVHLHGEVANPQDIVLTDSDFGKSYMYHGNVTTFLRT LFESEYTVLFIGYSYNDIVMKYFTRSLPDLSGKKRYIFTSKDQASNYIPLGLTPIIHEKN NYKQIYDSLLRIANLVTRDYNSWSLRIKDISEEVPNKINDEFDFEIKEILNNIHYSDKFF SKIKSRDWAEYLFNKEYFDEIFSSNKIDDFGIQRIEWLSREIIINETDLFLKFCCDKDFI LSKKLQIEIATIICNKNTKIEKIEKLINLIDFNNLDFMLVGRLLDVCYTNRPKLDFVANE IYSKSLSFVLNKNTIISTDIIGIDFKFENYIMEELWNKYKLFKNKYYINILNNISNQLYN LKRYKIIGFYVEEFEFASFYPRTEEYISNLEQFLIIFKELLLGMDDNNKEYWYKTYISSD IPILLRSSLLILRHMSNITGKEKLNLLKSNNIKILDISLKEELFWLYADIFPSLNSNDKE IFLDEIMNEEKLDENYTNKTYFYQKYNLLIWLQRFDENNQDIINKINSIKERYDYFKPLE NPEKSIGPLTLRWGDAQLPYTETEIVNNLEKIIDELLSYEGDGFERAERITLIRKLEKIC SENENFREKLIELLIKENEIDTDLWRGIIMSLEKSNLSEQKLIYTFNRVFFNPIFDIYNL EISQAIFSILDTRKSISDNLVDFFYEKINLLWKYSSNTEEKSLDYMTRALNSSKGNLALS LIKLIDISVKNSGEKYLEDRFKDFLEQMLNEEGYNDSSVVILGNASFFYSIDSDWCEKFI LDKYRSNDDEILKMAWSGFVYQSFLYTEFALVFESIYHEAIKNINIFDENIRKKIFKGYM SLIFNFSENPMEDYIPNIFRDSMTEEILYLFYSELSLYIDNLDKFGKEEIFYKWIKAFLD RRSEGYPISASNQEKNLIIRFLVKFTEITIDFDNILSKFYKEFFVEQSTLWFFTYYIEIT KDNADIINKIMILVTDQMINNTQDLIINTTKVYLKDIFKKVTKFGVNTDKFEKNLEFMNV N >gi|229269867|gb|GG666044.1| GENE 153 180221 - 181426 588 401 aa, chain + ## HITS:1 COG:no KEGG:Bphy_7318 NR:ns ## KEGG: Bphy_7318 # Name: not_defined # Def: FRG domain-containing protein # Organism: B.phymatum # Pathway: not_defined # 3 147 156 317 433 70 30.0 1e-10 MKKFEITNLISFMEVLQEITSNGSKFFFRGEGARYKKPLLASGYRKNQFRSILQDARQDY FREVGYMLDSDSRESFIAYSQHHGLPTELLDITENPIVALYFACSNDIDSDGIIYAISND LNIADPLTSKVYNNEDDIVSINRDMKEIGNHFQETGGKFLKIPNSTFFEDIMVDFLAQAS LDKAYVNSNNIYSKLKLCKYILEAHDKGFKNTVIHEDYNIIKNEEKIIELMNLLDRYCNT SEKDELEKFYLEFCNLKFVREIIIDTDINKDNPYLDRINKLNYKPLILLFILSYEISDYK FPVFPKIIYKPSIKFDRWKNQDGLFIYQLNTEKTLPPSKQSLTLNINEIKQVVQKIDYQY EIVISNKKQILHELDNIGVNRKFIYPDSDNIAQYIKEKYKI >gi|229269867|gb|GG666044.1| GENE 154 181792 - 182007 183 71 aa, chain + ## HITS:1 COG:no KEGG:SDEG_0952 NR:ns ## KEGG: SDEG_0952 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 67 1 67 71 122 94.0 4e-27 MGFSYDKLWKKLIDEKMNKLDLQKAINTTPHTIAKMGRDENVSMEILGRICRYFKCDISD ILEYRIENTND >gi|229269867|gb|GG666044.1| GENE 155 182000 - 182647 620 215 aa, chain + ## HITS:1 COG:aq_319 KEGG:ns NR:ns ## COG: aq_319 COG0745 # Protein_GI_number: 15605840 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Aquifex aeolicus # 1 214 10 228 228 134 38.0 1e-31 MIEDDSTIAFAVKTYLNKHNIETIIYNNLSQTENLNFNDFDLILLDANLPDGSGFNFLKW LREFSDLPVIMLTVKDEDEYVIKGLSQGADDYITKPFSLPVLKARIDNVFSRKIKKVNEL TFKNLSLDLISKQASIDGKDLDLSLKEFAILEMLLENQNINLLRDRILDYVWGYDFYEVN DNTLTVTIKRLRSKLGDYGSHIKTLRGIGYRWDNE >gi|229269867|gb|GG666044.1| GENE 156 182640 - 183617 755 325 aa, chain + ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 7 323 12 327 329 103 28.0 5e-22 MNKSKNILLALILNILMSLFVVYLNPRFDILTLIGFLLINIILFLIIRKFEKKKEIELED KINNIFNLLHSLDLNSDNYEIIDDEFGKLRDEIIKIIIENKRIAENAEKNKEILREYTED IAHQIKTPLTGSLLLLDLLEDEEDESAKEYITRLRDNLLRLYNLSDILLKLAALDSGTIE MTKDRISARGLIEDIIQNLKDYFINDNVEIPLYGDDFNLICDKKWTYEALFNVMKNGIEA TEGRQIEIQLKETNLYKSIFVEDFSKGLDREMLEKVFKRFYKLDPNSKGYGIGLPMAKSV MERQNGELLYHKGKKSNSFELRFYN >gi|229269867|gb|GG666044.1| GENE 157 183717 - 184406 325 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 3 199 4 199 223 129 35 2e-28 MNIVKTVDLTKTYNSGVEVHALSNVNFEMEKGDLVAIIGDSGSGKSTLLHLLAGVDKPTS GDIFIQDKNITKFNKDEMTVFRRRNIGVVYQFFNLIPNINVRQNILLPLLLDNKKVDEEY LKEILSILGIEGKLDRYPKQLSGGEQQRVAIARSLITRPAIILADEPTGNLDRKNSEEIT GLFRLVNKRLNSTIMIITHDEKVANSCDKVYRMVDGRLNFLGDETYENY >gi|229269867|gb|GG666044.1| GENE 158 184393 - 186888 1795 831 aa, chain + ## HITS:1 COG:CAC2731 KEGG:ns NR:ns ## COG: CAC2731 COG0577 # Protein_GI_number: 15895988 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 1 824 1 865 875 82 19.0 2e-15 MKIINDLADGAVKNNKKDSFAIKISILLAVMLLGTVIFISNSIKTGRYEYVKKTFGDYHV KITGIDEGFYDKLKNNKDIEKVSFNKIIKTDLNAVIYENGDPASLLGYDIKEGKKPEKAN ELLVQERFLIKNKEYDLGSEINVRDKTYKIVGTYDDFSSSFEEAKFVGLSESDDKKVLFE KNDGIEAQIWYKNIRDTYTKTREILSEMNIDENHALDIGRVFYNKDILEYKMVYPKGIIP PKSVVNSALEQYGAAFFLCLLFAFIIYGAFNVWNNRDLKEIALLKSTGMTDKQVKQLIRK KALKLSTLPIALGIILSLAFANLLLYLMWLNNSISYKNMSEIVGESLKSPDFHFVYPNPI SIIIILLLSLLMVYLSATIPARKSAKIKIIEGLNGITEKNIKLRKSKINGPIEKTLAKDY YRSYRSTYRIIVISMAISAFVLTTVLVSQSYRTLNEKYNSYKSPYNFNSSIYTDKNLDKN LLADLEKVDGIKELHLYQRNDTKFYVDDNKDLISKDLKDSLASGKIENDRLYASLYALTD EDFEELLKENNITNASYLLLNKIRKDNRTPYAFSEYIKISDKDTGKVTLKYNAQGKPINI KIDASIDEMPYDLEAYDNNEISIYTSTSNMKKFIDEYGIDKSDPVYYYFVKIKAEKNKEK VFEDAEKVISNYVPKSDHETSTEILREATSKEQTRNERLLNLAIQIILITIALSNAYNSF KGNLRARSNDFKLLSTTGMTEKQIEKMVFSEVKILFKNIFLVYIFMFSIGIVLRAYRSNY ELGFGIKELLINMNYTPILIVFVCIIAGVLLAIKSGLKTINENSDNTFKSI >gi|229269867|gb|GG666044.1| GENE 159 186912 - 187151 194 79 aa, chain - ## HITS:1 COG:no KEGG:FMG_0943 NR:ns ## KEGG: FMG_0943 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 71 4 74 446 114 80.0 2e-24 MAIIKTHPIKSTLNLAIDYITESEKTDEKILVSSFKCHPYIDHIQFMKTREDNDINGSVL SGILIQSFILGWFCAIEML >gi|229269867|gb|GG666044.1| GENE 160 187153 - 187434 252 93 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 93 60 152 152 160 95.0 2e-38 MKLANCKTMSHFLRKCVLEKEIYIVDLEPFRNLQWLLSNATNNINQIVKATNATGVIYKN EIESMNNQIEKLSKEIWQIHSLLLNKSKESSGD >gi|229269867|gb|GG666044.1| GENE 161 187567 - 187737 159 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485407|ref|ZP_03915723.1| ## NR: gi|227485407|ref|ZP_03915723.1| hypothetical protein HMPREF0072_0810 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0810 [Anaerococcus lactolyticus ATCC 51172] # 1 56 1 56 56 96 100.0 5e-19 MYKEDLRLDTGMSSATLHKLGKNEIVSMDVLARICESLKCDEGDIVSYINEEGVSE >gi|229269867|gb|GG666044.1| GENE 162 187829 - 189271 653 480 aa, chain - ## HITS:1 COG:no KEGG:NT01CX_0452 NR:ns ## KEGG: NT01CX_0452 # Name: not_defined # Def: hypothetical protein # Organism: C.novyi # Pathway: not_defined # 7 465 12 462 477 111 23.0 7e-23 MRNIQKYGGTWKFFDSEKTFQGELHIDSDKNFIALELIIPASDSNPMPRPPYKGKIPYIC GTLFSGAKVLLYKCETGKEHTYLLSYTQQIIYSDFAFWGLEIKSEDEVMFSNVTVDFGEI INWSRLCKYNWDYSSNYGVNLIWEHEDPVNFKFGDGLLIKFYPVQGSMESNSYSKEIIAR QSVLVDFVYNQPKEIDEILDDILSIQYLIGLGIDNEVVIENIKYQHPTIYSEFENKDGSV TKHFLKADLLFGKGEKKSTASIRPFKFIFTLRDINDQNIFLNWNNRYSKLKPVLDLYFTV FSNKITAPEVLFLNLVQALETFHARFITDDVKDYITRVEKITYNFCRGNENQNQWHDFLL DEHQQNSKKIHLRSRLADLIFAEGILPFWPSSYNKVEYISKVVDTRNYYTHYNIEKEEKA LSREELPLVNAELRILLQFHILKILGFSTDELRKKTVEEMNRLNDIKFLQEGTHEIKERL >gi|229269867|gb|GG666044.1| GENE 163 189281 - 189652 317 123 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485409|ref|ZP_03915725.1| ## NR: gi|227485409|ref|ZP_03915725.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 123 25 147 147 235 100.0 1e-60 MNFEKEWIKHFTKDVSKKDLDFRVRDSGDFIWHAFLDLIDKGSYLVGNEARKTFDKVNKV GTIYFFPWDENKVFENNIEEITADMLDRYDEVYLVASDWSWTNIKTHEEELGPYFCSNTE NHI >gi|229269867|gb|GG666044.1| GENE 164 189763 - 190011 316 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485410|ref|ZP_03915726.1| ## NR: gi|227485410|ref|ZP_03915726.1| hypothetical protein HMPREF0072_0813 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0813 [Anaerococcus lactolyticus ATCC 51172] # 1 82 1 82 82 133 100.0 4e-30 MKIYMNEQGLLEKERELCLGLGGIEDFIKELDAMRDTFQEVQDRYENFEKVYHSDMKNML EGLFKFNQSFVRNNETLIDKIE >gi|229269867|gb|GG666044.1| GENE 165 190018 - 190380 307 120 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 111 35 145 152 171 84.0 7e-42 MDNRKRKNQLKIYLTDEEKEIFEKKMKLANCKTMSHFLRKCVLEKEIYIVDLEPFRDLQW LLSNVTNNINQIAKATNMTGVIYKNDIQAIRQDVDKLSKEIWDIHSLLLKRIQKIQEYQE >gi|229269867|gb|GG666044.1| GENE 166 192418 - 193851 935 477 aa, chain - ## HITS:1 COG:XF2121 KEGG:ns NR:ns ## COG: XF2121 COG5545 # Protein_GI_number: 15838712 # Func_class: R General function prediction only # Function: Predicted P-loop ATPase and inactivated derivatives # Organism: Xylella fastidiosa 9a5c # 94 352 102 346 501 102 28.0 2e-21 MTDIKLKFPEIDQTYAFLDLQTTDKGTVRQITGNIVTAILNPKYCQNQKIIDGQIFFDKF TNEIKFQGKIIGERNIKENQIRLWDDSLNNRLGLEIEKHFGINYNANKMWEAIRFVAHQY EVSPPKQYLQNLKWNGDKNAIRKLLPRYLGANDTELNNWIMEHMILGMIKRIFNPGSKLD EMIVLVGGQGIGKSTFARYLSITDDWFCTIENIQGKDAIMNLIGKTVVEIEEFVALRNAK SANEAKSFLSKLSDRIRIPYEKYATDVPRTCIFIGTLNERTFLNDHTGERRYLPVECNSN QRIRTIYPDKNNKEKISDKEYMSRIREDFNQALALGYEIFKNKTHAWTIPKNLLKDLYKE QEKFKYLNPDVEDIRYLLEEYKPKSADPNITCFKELTMQGFQIKSKSFSEIMDNYFQEWI PVRSSKTKRISPSGVSIPVKLYYEKKEEYKTDFIEVDKKFLPEEWQKENQLEIDTEN >gi|229269867|gb|GG666044.1| GENE 167 193999 - 194361 339 120 aa, chain - ## HITS:1 COG:no KEGG:CLOST_0301 NR:ns ## KEGG: CLOST_0301 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 17 115 22 120 123 101 60.0 1e-20 MFRRHSLDKISQKTRNKEKNRKRNRILNFRVSEEEYELINKKIEISGLKKQDYFIQMLLN HEVKLVSDYRLSDNIAKEIFQLAKVIKKFGKLNDDEADILIYILEIYEEIKKEKSPYYKE >gi|229269867|gb|GG666044.1| GENE 168 194354 - 195478 563 374 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 7 352 7 364 368 109 28.0 7e-24 MPAFRDESGNKTWFCKFNYTNWKGEKLTKKKRGFLTKKEALKWEQEFLNQHSESIEMSFR EFFELYKRDRKPRIRENTWRTKEAIVNQKILPYIGDLMLNEINNVTIIQWQNELMKIKDK NGKKYSPTYLRTIHAQLSSILNHACRYYNLKTNVARDVGSMGEKEADEMLFWTQDEYERF IEAIKDKPESFYAFELLYWCGLRMGELLALTKEKFDFERHTLKIDESLQRIDGKNVITAP KTKKSIRTIVMPEFLTDEIKEYIESFYKLKPKDLIFNFSKSYLHHEMDRGSKKSQVKRIR IHDLRHSHVSLLIELGFSATAIADRVGHESIDITYRYAHLFPSKQKEMALSLTQVRNNKA NDWKDLLEEDDKDV >gi|229269867|gb|GG666044.1| GENE 169 195480 - 195674 231 64 aa, chain - ## HITS:1 COG:no KEGG:CLOST_0299 NR:ns ## KEGG: CLOST_0299 # Name: not_defined # Def: transcriptional regulator (modular protein) # Organism: C.sticklandii # Pathway: not_defined # 1 56 1 56 70 89 78.0 5e-17 MKGIFMNAKDVQDFLDVSRTTAYQIINDMNQDLLKLGYRVQRGKVNREYFMEKYCYKPTN AKEV >gi|229269867|gb|GG666044.1| GENE 170 195972 - 196367 339 131 aa, chain + ## HITS:1 COG:no KEGG:HS_0422 NR:ns ## KEGG: HS_0422 # Name: not_defined # Def: transcriptional regulator # Organism: H.somnus # Pathway: not_defined # 2 131 14 143 146 204 80.0 1e-51 MRNLTQKELAIKSGLTDAAIRNYELGNRSPSKEQLQKISEALDCDISALINHEPNSIFEI MHIIFDYEKDMKFRPLADEGEITGLLSNDVDFNNFLIEWNEMRKKHYNDEITDEEFEDWK LSYPKKSRFLK >gi|229269867|gb|GG666044.1| GENE 171 196795 - 197646 724 283 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1941 NR:ns ## KEGG: HMPREF9243_1941 # Name: not_defined # Def: transcriptional regulator, MerR family # Organism: A.urinae # Pathway: not_defined # 1 274 1 273 280 222 46.0 1e-56 MLRSEIQKETGLTRKAIEYYEDKGLINPQKSENGYRDYSIKDLEILKKVSIFRKLGMSIS DIYQCISSGGNSLSSVLREKQHQLDLDEKRKKILEMIVKGESNELINEKVSLLEVEENIY EKLEIAFPGYFGQMLFAAYQPFLNEPLEDDGKDYFYKYIAYLDWLPTFELTEEEKKYIEN ISSSFDMKTLRDVNQAKLDAIESFEKWMKDNEDVISQYETYKNSEEYQNSMMKQIQDKLK NFMKENQYYEIAIPLIRKFSKSYDNYYKKLLKANEKYLNNKYQ >gi|229269867|gb|GG666044.1| GENE 172 198090 - 199916 791 608 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485418|ref|ZP_03915734.1| ## NR: gi|227485418|ref|ZP_03915734.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 608 150 757 757 1093 100.0 0 MQEFDYDKEEIILYLEKIKLKDFGRIKRNIEDNLNRVVYGLSENFFEKYGDKLLSENCFN FQSFDRGTNLTWQEDTLLDMIQISIRNGEVIPMYSNGDIIVPNYKDWTPDLLKQLKNYFN NRISDFVIESVDFLLNQKAPNIETIEDHCNLFLELISKGEDYEILTSSTYEILTMLFDQG AMDRIDKTEVIKEFYKSLHSITSVNLLMRLRSSFPLHRDQIQSVKDYIENEYRTILDIND IPNLTQYLKNIDIARYINQIYYDETKDRFLKLIKDVNDTLVANIFYHAMLFLISVNQTNQ IVDKRIVKQDMINLQEYWEKSKYQEQVKNLQEFTYCTQISTEEVEKYNKSILENPIIVAN STVLAKVDDLISVLERTSNHSLMYMVNRIEINNIFPIKDTGINFDRHETDNILRKQVEKI IEKYGYKFINILDADIYVSAMHDTYINNVYFVINLFNKEKELYELLEKIIGVRLIPFNEQ ISLGHLTQLFPLLEIEIRKLGKLFGIVPFKENVREFMKFKDPSSILRELIEDVYEELDGL ESAPDLLFVYHFMYNSNSLNIRNECIHGRDYFEGYMLKFAFKVTMLALYMIRYRINSILT NSNSYNEV >gi|229269867|gb|GG666044.1| GENE 173 200684 - 201922 334 412 aa, chain - ## HITS:1 COG:BS_ydcL KEGG:ns NR:ns ## COG: BS_ydcL COG0582 # Protein_GI_number: 16077547 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Bacillus subtilis # 9 380 3 368 368 127 27.0 4e-29 MSKTKYPCVYKDKNGKFFYQVELGIDNITGKRIQKKGRKDNNGKNFSTAKSCYDYSIYLK RKYVESQGIFANGIKLEDFIEKYFIGHYKAKVQDSTFRTKIHIIRKVQKYFANAKIEDIN VRKCEAFKSDLINNSDYSKTYASMIYGCLRQILDYAVTLEFVHENVSKKTKSIPKEKIYV PFWTLDEFQKVISTFCLDDLYEHMGFVMLWLYFNTGIRVGEGQALTWNKVNFKDKTLTIN STIDLSSPSSYTIKNRTKTDSGNRIISLDDSTINILKRWKSTQKKYGVSKFIISYCDKPI RRNTIHRIINRHAKLANVKRIQAKGLRHSHVSYLINHFNADILTVSNRLGHSGPEITLKH YSHLWPNRDRSLAKKMSGIIKFDNPKKSMVEFNGNQFIKYNSSDSCQNPAKI >gi|229269867|gb|GG666044.1| GENE 174 201915 - 202115 236 66 aa, chain - ## HITS:1 COG:no KEGG:LAR_1503 NR:ns ## KEGG: LAR_1503 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 2 62 4 64 71 62 57.0 5e-09 MMVTKDDLIDIGFKEHQAKVIIQRAKKELVNDGYSLYNGTRIGCVPKSYVEKIIGVSLDD KGEHNE >gi|229269867|gb|GG666044.1| GENE 175 202118 - 202612 343 164 aa, chain - ## HITS:1 COG:no KEGG:Sez_0300 NR:ns ## KEGG: Sez_0300 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 4 148 226 370 411 71 28.0 1e-11 MKPYRHIAKNVNDWVRLEAEFSSEYAHQITDMILECKNDKELKEVLLCSILSRYMFFYTR SNKPHKITKLMIDELEDMNYTLSLPSPRDNDLDRSIEYIINNSGLFSIFYKIQYLYGFDE LYDFIIFLVDEYKKYTVKDDVLIWLKKHEKNYLGKAPPWRKDGE >gi|229269867|gb|GG666044.1| GENE 176 202609 - 202806 115 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485422|ref|ZP_03915738.1| ## NR: gi|227485422|ref|ZP_03915738.1| hypothetical protein HMPREF0072_0825 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0825 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 65 81 100.0 2e-14 MGKSKYKNLYDRVVNENKKKRYPRNPSKISDVSNNFNAETLYIGSRKRNSKVLLRIYDKK KEQLS >gi|229269867|gb|GG666044.1| GENE 177 202787 - 203308 373 173 aa, chain - ## HITS:1 COG:no KEGG:Sez_0300 NR:ns ## KEGG: Sez_0300 # Name: not_defined # Def: hypothetical protein # Organism: S.equi # Pathway: not_defined # 2 166 16 173 411 79 31.0 8e-14 MMKLGVDQFTLILIPNEKFDFESWRLLVAPKIINIFNSCTKIESILGKLSLVDANVGKYI NFKLPAGYTKGYYVKNALFYFSIAYNEAMPNMCVIIYFSATAWKIYCENYTNTYNKPMNI RRFLKMIKTTYFKCRLSRLDICVDFIDEGLSVSQLSKSIQCGRTEVRYGKIQI >gi|229269867|gb|GG666044.1| GENE 178 203424 - 204716 457 430 aa, chain - ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 203 388 225 402 480 80 29.0 8e-15 MRTPRYIRGTFAMLIIIICLILFLGLQILSPLLVKYKIVNNDVFVNLFLIIAVCILVILL MSWSYRNSLNRGLKYAFIHYRISKKLRKQLIDSKYYIENKVFNVLILPLVKVEFIDGGNL NQGIISIENNIKFDKKLEDIRLNGALSDYIVTQQYLSNDGNTYIYEISSKEMFSQLVFDS IKDYLAWSKTGINDYSFRLSDNDVLPFHHMGIAAQTGGGKSFMLQSLLIQILNKEIKHLV YLIDPKSADLLSFGKHNLKQGFYADKEGAISMIEKFYNDMVQRKEDLQEFFDKKSNFDYR DLGLPASILVIDEFGALRASWNTLAKKDRDYIESLLSNIVFMGRQLGFFVFLVLQRFSAE TVPRAITEQLVIRIVLSESDDLTYRTLFSQSANIPSLNLKPGMGFFSCPKLAKIESPKLF VFPFCRFLKT >gi|229269867|gb|GG666044.1| GENE 179 204713 - 205057 404 114 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485425|ref|ZP_03915741.1| ## NR: gi|227485425|ref|ZP_03915741.1| hypothetical protein HMPREF0072_0828 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0828 [Anaerococcus lactolyticus ATCC 51172] # 1 114 1 114 114 206 100.0 4e-52 MKGLNKFMAFNASAFFKDKDIMVIANEDWVDYENAKPTEPKGTKYKCMIVSDKTNYGEGA TKLNEGEQIIIKVEGKAKPYEKFSRVKMINPKCNVYGEYRNNLSITAEDVEFSK >gi|229269867|gb|GG666044.1| GENE 180 205054 - 205428 358 124 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485426|ref|ZP_03915742.1| ## NR: gi|227485426|ref|ZP_03915742.1| hypothetical protein HMPREF0072_0829 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0829 [Anaerococcus lactolyticus ATCC 51172] # 1 124 1 124 124 212 100.0 6e-54 MHTKNLIESLNKYLELRSKMVIIKSIITESLKKENYDSYQAAETLLKAICYTHGYFGLDV NGDYRINDYNAIYDIINKYNILNNEYSNIKKLLNRLFNHGDITSNECIREVFWILIDLEK RGLI >gi|229269867|gb|GG666044.1| GENE 181 205726 - 206793 660 355 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485427|ref|ZP_03915743.1| ## NR: gi|227485427|ref|ZP_03915743.1| hypothetical protein HMPREF0072_0830 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0830 [Anaerococcus lactolyticus ATCC 51172] # 1 355 1 355 355 553 100.0 1e-156 MNELEINKFYDSVRKFYDIKTNNQHAFRILSSRRLKKFYSELKNIKLKELKYKNVNDIWV DLTENERMSYMISIKDRIFDSYLDKSKHKKANDKIIKHYSVVLDNAISAYNHDKNREDVA YKIYYNPNNLINSYNEQKIDAEKYFPHINFPSFEEWCKINKNLYESSNKYIIESHKDFDS WYKENKLLEDWAIENKDLYEQIKSNCPYSYKSDNIPSIRFKDWYRNFSYRSLRLYDLDMQ FKEELNHTLQLDDSNDYKLDLDNIDNNIIYYDSYLFKRYVNVTIMTIIKALKYKGIEIHT DEIIKNLYIVNDTYKDDYEACIQEFYKANEKIKALDFIEISEKKEFDPFNNKNRR >gi|229269867|gb|GG666044.1| GENE 182 206799 - 207083 97 94 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485428|ref|ZP_03915744.1| ## NR: gi|227485428|ref|ZP_03915744.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 94 1 94 94 167 100.0 2e-40 MYTLESKEELSDLVKLFLTTIIEKNKYKYNYGRQANKTLPDLILELPIKRNSDDNPIIDK NRTYSSDGYIPDWDFMEKYIKSLPFGDKISKTGG >gi|229269867|gb|GG666044.1| GENE 183 207380 - 207928 570 182 aa, chain - ## HITS:1 COG:no KEGG:ATP_00026 NR:ns ## KEGG: ATP_00026 # Name: not_defined # Def: N-6 DNA methylase # Organism: Phytoplasma_mali # Pathway: not_defined # 2 171 629 781 785 78 33.0 2e-13 MIELDNWKEFNVGKLLNPQTTKLSIKNDLEEGKVPFISRTGLNNGVDCYVDVSNDRITKG DCITIGAEGVIAFYQRYDFATGNKVYTLRNPKMNEKSALFICTVLNLEIFKYSYGRARVL NKLKDEVIKLPAKVDKNDCFVIDKDKQFNKEGYIPDWEYMENFIERLETRERERVKALLE IL >gi|229269867|gb|GG666044.1| GENE 184 207930 - 209858 1368 642 aa, chain - ## HITS:1 COG:no KEGG:Shel_20250 NR:ns ## KEGG: Shel_20250 # Name: not_defined # Def: type I restriction-modification system methyltransferase subunit # Organism: S.heliotrinireducens # Pathway: not_defined # 1 642 11 647 650 694 55.0 0 MQRHDIVNRIGNEYKTSNIEGGEFSYVKAAGSRDKLVNLLGYTPDHFKLDIRFENRERGV VVLVETKADFVESDKEQLRQYVDEEKVLFNTKKIIAILANTNNDKFKIWKNKISDETLLN NENVIDTMEYYTSLFNASKQNDREKVLKNTYALNELLHKKDIPEKLRSQFVGSSLLYIKD VVKQRGFITIDDKAVEELRDYWSYNKPSGIIGSIKETLENLLDGSDNKAKKIELLQKNVL NNQKVKALDIKDWVGILSYILENIYAYIDEDSDEGQDILNLFFIAFNKYTGKDDKNQAFT PDHITEFMCRITEVDRYKRVFDGACGSGSFLVQAMVKELADCDKARITDAEKQILKENIK KNNIYGVEIEETAFGLSTTNMLIHGDGNSNIKLASLFDSEEFFIEANPDIVLMNPPYNAK PRTIPGKYKIGWKPNQINGKEDPSKGFSFAEFISDCVKKININRVNDGKAKKEVKLAILL PVSAAIGSNNILKSAKEKMLEDNTLEAVFTLPNEVFYPGASVSACCMVFTLGRPHISADG SIRETFFGYYKDDGFIKRKNLGRVEQFSKEDESLWKKIEEKWLDLYRNKKVVEGLSATAK VDHNDEWLAEAYMKTDYSTLTEADFEKTIRNYYAFLIKDGVI >gi|229269867|gb|GG666044.1| GENE 185 210229 - 211761 2013 510 aa, chain - ## HITS:1 COG:CAC2700_2 KEGG:ns NR:ns ## COG: CAC2700_2 COG0519 # Protein_GI_number: 15895957 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Clostridium acetobutylicum # 196 510 2 316 316 411 63.0 1e-114 MSKEKILVLNFGGQYDQLIVRRVREMGVFAELHECDTDLKDLDLNNLAGIILTGGPQSVN NEESPRADEKIFDLGVPVLGICYGHQFINFVFGGEVETPNLAEYGKTELQVDTNSELFKN IPEESIIWMNHRDRVAKIADGFKATAKTANTEIAAMENDKKQIYSVQFHPEVVHSEYGRE ILENFVLNICQAEKTWKMADFATEIIEEIKNKYAGEKMICGLSGGVDSSVAATIVSKAIG DKLQCIFVDHGLLRKDEAKSVMETYKNLGLNVKMVDKSKEFLDLLKGVSDPETKRKIIGN HFVEVFEEEAKKIGGASYLVQGTIYPDVIESGKDKASVIKSHHNVGGLPEDMDFKGLVEP LRMLFKDEVRAVGEAIGIPHDMVWRQPFPGPGLGIRVMGDITEDKLRIVRETDAILREEV KNFGLNEDIWQYFTVWTPIKTVGVKGDARSYDNVVAIRAVTSTDAMTVEAANLPYDLLQT LSNRMINEVEGVGRIVYDITSKPPGTIEWE >gi|229269867|gb|GG666044.1| GENE 186 211781 - 212611 959 276 aa, chain - ## HITS:1 COG:lin1980 KEGG:ns NR:ns ## COG: lin1980 COG1806 # Protein_GI_number: 16801046 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 1 264 1 269 270 199 43.0 5e-51 MEDVLTIVIISDSTGETAINYIKSVTSQFPDLETRVIRKPDISSKAELDIIMDGLDKESV IVMTIANKDLALHLRARAKKENIIVLDILSYGINKFEELTGMKAIRQPGLTRTLSTGYFN MINAIEFAIKYDDGKDPRGFLDSDIVLVGVSRTSKTPTTMILATKNFKVSNLPLLPESEI PQELFEVDPDRVIGLVIDPDKLSNIRSQRTKTLGLMGESKYFDKERIKYELDYAMEVFKD LDCKVIDVTENTIEQTATEIIEYYFEKFPEEREEKS >gi|229269867|gb|GG666044.1| GENE 187 212621 - 214684 2392 687 aa, chain - ## HITS:1 COG:BH1371 KEGG:ns NR:ns ## COG: BH1371 COG0751 # Protein_GI_number: 15613934 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, beta subunit # Organism: Bacillus halodurans # 3 686 5 691 693 431 36.0 1e-120 MHNYLLEIGVEEIPSDYVKNTKIQLKEKFEKLLSENKLSYEDVEIESTPRRFMVLLKNVA ETAQQEVISVRGPSAKIAYDEDNNPSRALLGFLKGQKAELSDVIIKEQKGEDYVFVEKKE KSKSLEEILKENVYEIVKSISFPRSMRWGGKSIRWARPIRWFVSLLDDKVLDFDAEGIEV GNITKGHRTLGSDKIVIENISEYEAKLKENYVILRGKDRRDIILKGLNSVSSQVGGEYMK DEDLLDEVVNIVEYPTVLVGEIDHSYLELPREVITTPMKDHQRYFPILDDKKKLLPYFCL VRNGDDYESQNVIEGNKKVLVARLEDAKFFYDLDAANTLESYVKDLDNLVFFEGLGNMGQ KTKRLVELATSYQKELSLGDDIAEDAKRAAYLSKADLVTRMVVEFTELQGTMGAIYALNS GENQRVATAIKEQYLPKNQNSETPKSVVGILLAIADKMDSIVGLYAIENYVTGSRDPFGL RRAALGIINIILENGIDVDIKKLIAEALLVYTEINALAFDYDKTMDETLTFIKDRLKNKL LDDGYRYDIVNSVINTNFTNILKMSEKVKAVSDFIGENDDSLSYLIRINNLTKESEDREI REDLLETDLERKFYEEITKLENFGLVSSADYKKELENIQATSLVGNDYLDNTMINVDNEE VKNNRLAMLNLLKRRMAKIFDISEIVR >gi|229269867|gb|GG666044.1| GENE 188 214677 - 215558 940 293 aa, chain - ## HITS:1 COG:BS_glyQ KEGG:ns NR:ns ## COG: BS_glyQ COG0752 # Protein_GI_number: 16079581 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase, alpha subunit # Organism: Bacillus subtilis # 1 290 1 290 295 407 63.0 1e-113 MYFEDLILKLEEYWKEQGCSVMIPYDIEKGAGTMNPHTFLRALGPEPWKVCYVEPSRRPA DGRYGENPNRLYQHHQMQILLKPTPSNIQDLYLKCLETIGIDPKKHDIRFVEDNWESPTL GAWGLGWEVWLDGMEITQFTYFQQVGGINCALESGEITIGLERICMYLQDVDNVYDIKWS ENLTYGDVFKLPEYENSKYSFEDADNETLETLFNIYEKEAERLIELGLIYPAYDNVLKTS HTFNTLDAKGAISVSERNHYIKRVRDISSLVAQKYIEKREELGFPLLRKEKHA >gi|229269867|gb|GG666044.1| GENE 189 215548 - 216324 429 258 aa, chain - ## HITS:1 COG:lin1497 KEGG:ns NR:ns ## COG: lin1497 COG1381 # Protein_GI_number: 16800565 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Listeria innocua # 6 199 1 189 255 65 25.0 7e-11 MATADLKNIRGIVLREFNYKESSKIIEVFTETMGKISISCQGVLKKNSKNLALTTRFILA SFDLYKSGKEFYGLREGIVLNPYYKSNKNFDIILYKSAICDLLLRTIDHIQIGTVFTLLT NSFDAFEEAKKNQVNIFLGFLLKYISFSGFKPNFKTCGICGKNIRGKYLYFSPSESSAIC DECKDQIFDRVFMTYEEFVYFNKLLYTKSEELEDIKLVEAYPKIGKIIIDYCLKNLDLAT YPSLEWVKKALERNVNVL >gi|229269867|gb|GG666044.1| GENE 190 216305 - 217192 796 295 aa, chain - ## HITS:1 COG:BH1367 KEGG:ns NR:ns ## COG: BH1367 COG1159 # Protein_GI_number: 15613930 # Func_class: R General function prediction only # Function: GTPase # Organism: Bacillus halodurans # 2 292 9 299 304 268 45.0 1e-71 MKSGFISVVGRANVGKSTLMEKILKEKISIISNKPQTTRDKINIIYNDEDSQLIFIDTPG IQKPRNVLQERLLSFSKDSLNESDVVTYVVDESKEIGKLDQMIIDELRKVRVPIILLINK IDLLNEEEIEEIKNLYEEVGLFDKIIAISALDDTNVHTYIDGVKSYLDDGPAYYDRDMIT DKTERFVVSEIIREKALRLLSEEVPHGLAVRIDDFKQRDDKPLIDIRATIIVEKNSHKQI VIGKNGKMIKQIGIDARSEIETFLDSKVNLQLWVKVEKDWRKKEKLVDRFGYGRP >gi|229269867|gb|GG666044.1| GENE 191 217189 - 217578 533 129 aa, chain - ## HITS:1 COG:CAC1544 KEGG:ns NR:ns ## COG: CAC1544 COG0295 # Protein_GI_number: 15894822 # Func_class: F Nucleotide transport and metabolism # Function: Cytidine deaminase # Organism: Clostridium acetobutylicum # 4 129 5 131 132 122 46.0 1e-28 MIKDLIKKALDLKERAYAPYSNFHVACVVMTKSGKIFEGVNVENAAYSPSLCAERNALST AITQGERDFAYIVITGDSDYTYPCGVCRQFIREFADGDTRIVVAKDSENYKTYTIEDLLP ESFSKKDLE >gi|229269867|gb|GG666044.1| GENE 192 217575 - 218381 825 268 aa, chain - ## HITS:1 COG:CAC1294_1 KEGG:ns NR:ns ## COG: CAC1294_1 COG0818 # Protein_GI_number: 15894576 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Diacylglycerol kinase # Organism: Clostridium acetobutylicum # 37 190 4 156 157 97 37.0 2e-20 MDKNYDELKENLKKEILDELKKGEGEDFEPLKLTHGQKFLKGFDYAYEGLVYAINHEKNM KFHILASILVLIASLFFNLSRVEMMFLVFSIAFVIALELLNTALEEVVDLASGGKFSKLA KAGKDVSAAATFVAALNAGFVGYLIFFDKFLNFYDSVILKIARRPSHLALIAISLVIILT IFLKGVFYEGHGTAFKGGFVSGHTSVAFCLATVGILMVKEPLVRLLLVVLALIVAESRYE ADIHSAREIVRGAILGTSMAMAIFGIFS >gi|229269867|gb|GG666044.1| GENE 193 218386 - 218844 522 152 aa, chain - ## HITS:1 COG:CAC1293 KEGG:ns NR:ns ## COG: CAC1293 COG0319 # Protein_GI_number: 15894575 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Clostridium acetobutylicum # 18 150 13 164 166 97 43.0 1e-20 MNLLLANDTKNDLDLDLIRERAEKTIEEVLRVENFTENAEVSLSIVDMETIHRLNKEYRE VDRPTDVLSFPMDEEGYDNEGNSIFLLGDIVICLDVAENQAKDFGHSLEREMMYLICHST LHLLGYDHIEEDDKLEMRSREKEVMKNLGVFK >gi|229269867|gb|GG666044.1| GENE 194 218841 - 219581 936 246 aa, chain - ## HITS:1 COG:lin1504 KEGG:ns NR:ns ## COG: lin1504 COG1702 # Protein_GI_number: 16800572 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Listeria innocua # 13 230 98 315 319 295 66.0 5e-80 MLERENKDVVKALLDHVIVTTAGGKPIKPKTLGQKSYIEKILANDIVFGIGPAGTGKTYL AVAMAVRAFKNNEVNRIILTRPAVEAGESLGFLPGDLQDKVDPYLRPLYDGLFEILGFET YQALVEKGIIEVAPLAYMRGRTLDNSFVILDEAQNTTYEQMKMFLTRLGYGSKAIITGDK TQVDLPRGRKSGLVSASQILKNVPGIDFMSFTSIDVVRHPLVQRIIDAYEKDDRMREEER KKEKRK >gi|229269867|gb|GG666044.1| GENE 195 219834 - 220274 519 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485441|ref|ZP_03915757.1| ## NR: gi|227485441|ref|ZP_03915757.1| hypothetical protein HMPREF0072_0844 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0844 [Anaerococcus lactolyticus ATCC 51172] # 1 146 1 146 146 186 100.0 4e-46 MANKNKSFLSFLENLAEEIQVESEKKGKIQNPFSEVKKSPRKKSLIGYLNDLLENMESDF GSYQSQSKPDIEAQRRLKSDLRTKHAEKFKKPEEGDTAALKRLKEAEQKEKTDKIREEMA KEKNRKRLKDAIIMAEILGPPVSKRR >gi|229269867|gb|GG666044.1| GENE 196 220264 - 221208 1408 314 aa, chain - ## HITS:1 COG:BS_yqfA KEGG:ns NR:ns ## COG: BS_yqfA COG4864 # Protein_GI_number: 16079592 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 314 7 330 331 381 66.0 1e-106 MEFIMMGLIFVLVVVFFTMVPVGLWITARFSGLKISMASLVAMRFRRVSPSKIVNAMIKS HQAGIHIATNDLESHYLAGGNINQVVDALIAAERANIDLSFEQAAAIDLAGRNVFEAVQV SVTPKVINTPTIAAVAKNGIEVKVIAKVTVRANIERLVGGAGEETIIARVGEGIVTTVGS SETHAEVLENPDNISQTVLNKGLDSGTAFEILSIDIADVDVGRNVGAELQRDQAEADKNI AQAKAEERRAQAIALEQENRAKVVEAESEIPLAIAQAFKEGNLGVMDYYNLQNIKADTKM RQSISNDEADLDGK >gi|229269867|gb|GG666044.1| GENE 197 221208 - 221831 565 207 aa, chain - ## HITS:1 COG:BS_yqeZ KEGG:ns NR:ns ## COG: BS_yqeZ COG1030 # Protein_GI_number: 16079593 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane-bound serine protease (ClpP class) # Organism: Bacillus subtilis # 2 207 232 437 437 65 28.0 7e-11 MLGNDLFIATSFILAVISLICLLFTQKKLLFTGAAVVLFAYFYYANAKYNIADNITVLTF IVGISLLSLELFIPSFGIIGVAGLALTTYSVMDSFTDPHTGIFVILATGLAVVITMTVFV KLGFRANLFDSYVLEGSEKNKRRPRPNRDLNNLIGSIGYTKSILRPTGRIEIDGEIYDAM ARAEFIEKSKVVSVIGVKDGHIIVKEM >gi|229269867|gb|GG666044.1| GENE 198 222236 - 224767 2683 843 aa, chain + ## HITS:1 COG:mlr6609 KEGG:ns NR:ns ## COG: mlr6609 COG0474 # Protein_GI_number: 13475516 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mesorhizobium loti # 4 843 40 878 896 658 42.0 0 MKEFWSYDKKEIFNQLKTSEKGLTSQEAETRIEDYGKNTLKEVKSSSKFMVFISQFKSPI TLILIFAAILSIFTKDYSDGFIILIIIMISSFLSYLNESHAQDAVKKLLSSVSVKSTVLR DGKFQEIDNAGLTLGDIIKVATGDMIPADCLLIDVNALTTDESSLTGETFPVEKNVKILD ATTSLSHRENSLWMGTHVISGSGLAVVVNLAKNSEFGKITSSLGQKDTDTDFERGIKDFG NLILHVTILLICLIFLFNIILNKSFLESFMFALALSVGLTPQMLPAIISVNLSKGAKRMS DEGVIVKKLNSIENFGSMTIMCSDKTGTITKGKVKLDYGLDYREEKSDDLIRLASINSYF QEGYKNPIDEAILQGNTTDFSPYKKLFEIPYSFENKILSVAVNDSSNLAQKNFMVTKGAF ENIVGVCKTYEKTDKSQGPIGEIKNQITELFNKYSAQGYRVLGLAYKFLDDGENIKEEKA SDMIFKGLLLFIDPLKDDVKDVICEMDRLGVSLKMITGDNKEIAKNIGSQIGLDPTKILL GEDLKDYSLSQLNKKVLDVDIFAEISPNQKEKIIRAYKEAGEIVGYMGDGINDAPAIKQA DVGISVNTAADTAKDAASIVLLQNNLNVLLSGIKEGRRTFINTLKYIFIATSANFGNMFS MAGASLFLKFLPLLPKQILLTNLFTDFPSLQIASDSVDSTWLEKPVKWDMSFIKKFMIIF GITSSVFDYLTFFVLLAIFKADEQLFQTGWMLESVISAMVVMLIVRTARPVLRSKPSKKL ILAIVLVSLVLIAIIYSPLNTYLGLTSLPIKALISMFGISLAYALIAEVLKKKFYEKNSF SRK >gi|229269867|gb|GG666044.1| GENE 199 224831 - 225844 1283 337 aa, chain - ## HITS:1 COG:SSO0063 KEGG:ns NR:ns ## COG: SSO0063 COG1304 # Protein_GI_number: 15897029 # Func_class: C Energy production and conversion # Function: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases # Organism: Sulfolobus solfataricus # 8 334 7 349 368 239 40.0 8e-63 MTSRRRERKDEHIENYLKTSGYSDPLFEDVYLDHNSLSDVNFDEIDTSIEFLGRKISMPI MINAMTGGGESSADINEDLSSICKSLNIPMAVGSQTIGLEDDEAKESFTLIREKDMVRIG NLGAERSLEDFKNAAGMIGAHAIQVHLNVAQELFMPEGDKNFKGYYENIKKLIKSLDVPI IVKETGNGLSKATCQKLIEAGVKYLDVSGKGGTNFIEIEDMRDFESDYKEFYDWGVPTAK AIIDARSLSDDVFIIGSGGIKTAVDVAKALILGADMTAISGEALRYLLLGSYEACYDYLK EMNRRLKIVMALLGVKNIEELKKVDYKLTGRLKELVG >gi|229269867|gb|GG666044.1| GENE 200 225857 - 227167 1488 436 aa, chain - ## HITS:1 COG:BH3647 KEGG:ns NR:ns ## COG: BH3647 COG1316 # Protein_GI_number: 15616209 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 45 289 65 309 359 137 33.0 4e-32 MKIRRFFALVFVFALSFVASKFAFDFLDQRSNAANHSNGGTFEDQAVKTSKDEYLILLVG VDKAAGEENNEDFTRTDTIMLMKANTKDGTIKLLSIPRDSRVLVRNTYDKVNHAHAFGGI ELTLQSLRNFLGLDIDYYVQVNYQALVNIVDAIGGVDYEVPEGVNIKKWTLNIKPGMHHF NGTDTMWYLRTRHIYNNGDIGRVHAQQDFVKAMVDQAVKKSNEMNLMTVISSYIKYVKTN LPMSAIVNLVKSIPNFSSDKVETFIVPGNGAYINNISYYIPDERGTWDIVNDVFADFKLS KWKEEDSGLPESNHASINQEAPVNIFPKNNNINNQTYEPNYNYENNYENTYENNYNNSYE YQEEPKWEEPAKSTPKTNQGHRERRQEPSTETYEPAPKAPESPAPKEAPADPGVVEYEPG LNVDQPSDSGSGEGGE >gi|229269867|gb|GG666044.1| GENE 201 227339 - 228655 1084 438 aa, chain + ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 3 418 4 418 438 350 45.0 4e-96 MENRNKFSSLWGFIMACVGSAVGLANVWAFPYQLGSNGGLAFLLPYLLFAFIFGRVGLAA ENAIGRKYKSGPMVVYKEAYKSRNMEKFGKIIRWLPMIGVGLLSIGYAVVITYVIKALFD TISGSIFTVESATWFDSISTNDFKVIIPHLFLMVLVYFALAYETEGIEKTNKFIMPLFFV LFLILAIRVFFLDGALGGYKFIFNMDFGKLKEIKTWVAAMGQAFFSLSLVGTVMVVYGSY LPDDEDVIKASTITMGLDTLSAMISAFVMLPACFAYGFSPASGPKLLFVVLPQALKEMPL GKLYGIILFLAVVFAGISSIQSMLETITEAIVYSFPKLKRKMVLIALITTIYLIGIFIEP ISKWGPWMDIVTIYILPISGIIGAITWFWIIKKEDLLSEVNKSVKSKYGNTWYYTGKYIF VPLAIILCFIAIRYHISF >gi|229269867|gb|GG666044.1| GENE 202 228855 - 229028 191 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485449|ref|ZP_03915765.1| ## NR: gi|227485449|ref|ZP_03915765.1| hypothetical protein HMPREF0072_0852 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0852 [Anaerococcus lactolyticus ATCC 51172] # 1 57 1 57 57 83 100.0 6e-15 MNREYLLIGIALGAEKAEDYDIILTEEEKERIKRYQEESAKAKKEGRHIVWYAPDDE >gi|229269867|gb|GG666044.1| GENE 203 229077 - 229250 277 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485450|ref|ZP_03915766.1| ## NR: gi|227485450|ref|ZP_03915766.1| hypothetical protein HMPREF0072_0853 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0853 [Anaerococcus lactolyticus ATCC 51172] # 1 57 1 57 57 79 100.0 7e-14 MNREYLIMRIALGDTTAEANNITLTEEDKEAIEWYKKESEKAKKEGKHIVFYAPDMD >gi|229269867|gb|GG666044.1| GENE 204 229779 - 229985 107 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCGYNCCKEGFGIWEEGSSPLVRVQRNAETADPIADRIIPACAGTTFYDFNRDCWSEDHP RLCGYNCL >gi|229269867|gb|GG666044.1| GENE 205 230042 - 230305 147 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDNLLECLFQDHPRLCGYNIFFLILFINIAGSSPLVRVQLIMWMIIISGRRIIPACAGTT QKLQHQESSFKDHPRLCGYNLNMNLSS >gi|229269867|gb|GG666044.1| GENE 206 230269 - 230475 170 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRVQLKYEFIFLTLTGIIPACAGTTNMWYSMRMKIEDHPRLCGYNLIYDNDHFNKLGSSP LVRVQLLV >gi|229269867|gb|GG666044.1| GENE 207 230696 - 230959 139 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRVQLSTGGSVHIVIRIIPACAGTTVSWVIVIIFIPGSSPLVRVQLVHTVFFVEGVRIIP ACAGTTQGDAGRSEAREDHPRLCGYNF >gi|229269867|gb|GG666044.1| GENE 208 231197 - 232084 883 295 aa, chain - ## HITS:1 COG:TM0576 KEGG:ns NR:ns ## COG: TM0576 COG2176 # Protein_GI_number: 15643342 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Thermotoga maritima # 129 293 358 523 1367 87 30.0 3e-17 MPLTVITLKNSPPSLRGDLTKWMQEIATGVYVGNFNTKIRQELWERVVESVGSGEATMTY AYRNEIGYKFETHNSNKIMIDFEGIPLVLTPQNPKEDKKENKLGFSKAAKMRKAKKYFSF KSQEHTKAYIIIDLETTGLDPINDRIIEIGAIKIGKENKEYSSIIWQDIKLSEKISNITG ISDEDIKKGKDEKNAINEFIDFIGEDTLVGYNINFDIKFINESLKRQEKPKIKNMTYDVM QYVKNDKLFLKNYKLETVIKEYGINKNVPHRALEDVKIIQKLIAKLNKLVKRLEN >gi|229269867|gb|GG666044.1| GENE 209 232086 - 233024 1096 312 aa, chain - ## HITS:1 COG:STM2938 KEGG:ns NR:ns ## COG: STM2938 COG1518 # Protein_GI_number: 16766244 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Salmonella typhimurium LT2 # 12 286 6 278 306 201 39.0 2e-51 MKNIAGAKKTDLTELPRISDRVSFIYVEHAKINRVDSAITVSDYRGLVNIPVSLIGVLLL GPGTDISHRAMEILGDVGTSVIWVGERGVRYYAHGRSLANSTRFLEKQAKLVSNKRTRLT VARKMYAMRFKGEDVSNLTMQQLRGREGSRIRKVYRDCAKKFNVKWERRAYKVDDFEDSD PVNQALSALNVSLYGVCHSVIVALGMSPGLGFIHTGHDKSFVYDIADLYKAELTIPLAFD LANKHQEGEDIGKIGRLSLRDRMVDGKLMQKIVEDLQFLMDISEEEKISTEIIELWDDKE RNAKHGISYREI >gi|229269867|gb|GG666044.1| GENE 210 233021 - 233668 710 215 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0764 NR:ns ## KEGG: HMPREF0424_0764 # Name: casE # Def: CRISPR system CASCADE complex protein CasE # Organism: G.vaginalis # Pathway: not_defined # 2 213 3 212 215 174 44.0 3e-42 MYLSRVEIDINNRRKMKDLTHLGCYHGWVEHSFPQENDIRTRKLWRIDNIGDKYYLIILS EYIPDKEKLEKYGVESTTEVKDYDEFLASLKEGIRAKFRIKLNTVIAKIDKENSTKRGRI MPVPNEKLNGFLVDKAQRNGFEVKTDEFGISKIDKEYFMNFDKEDKKKSRKNIVSATYEG MLTITDLEKFKVALVNGIGKKKAYGCGFLTIIPEK >gi|229269867|gb|GG666044.1| GENE 211 233650 - 234342 678 230 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0607 NR:ns ## KEGG: SmuNN2025_0607 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 1 202 12 212 238 228 56.0 1e-58 MQSWGTSSRFETRTSDYYPSKSGVIGIIAASFGYERDEDEKIQKLNDLDFAVRVDQEGVL KKDYHIARKVKPNGELERTYVTNRYYMEDAVFVVAISHEDDKWMEEILQGLKYPYFQPFM GRRSCPLPARFILGTNEEGPIEALENLDWQAADWFKKKNKNYRADIYADKDLLPENSHTI RNDRVVSFSQKERKFGPRFEARSSLVMAKSDKDPFDVFESLEGQLCIYQE >gi|229269867|gb|GG666044.1| GENE 212 234385 - 235464 1175 359 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20673 NR:ns ## KEGG: HMPREF0421_20673 # Name: cse4 # Def: CSE4 family CRISPR-associated protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 5 358 1 362 362 411 59.0 1e-113 MQNKINNRLFLDIHAIQTVPPANINRDDTGSPKTAQYGGVTRARVSSQSWKRAIRKYFNE NGDVENVGIRSLEIVRYVANKIVQKDGSISIEEAMEMADKTINNAKISTKDQKAKALFFM SDKQAEELAQASIDKVNDKKILQEILKNDTSIDVALFGRMVADDASLNEDASSQVAHAIS THAIQSEFDFFTAVDDLAPEDNAGAGMLGTVEYNSSTLYRYANIALHDFYRQLADKEETI KATKLFVKSFVESMPTGKINTFANQTLPQAIVVSLRSDRPLNMVSAFEEPIKSDNGYVDK SIEKLFSEYTKYDKILDKPIFTAYLILGNTEVNEIGKSEASLNDLLEDLGKEIEKNIEA >gi|229269867|gb|GG666044.1| GENE 213 235448 - 236059 665 203 aa, chain - ## HITS:1 COG:no KEGG:SmuNN2025_0605 NR:ns ## KEGG: SmuNN2025_0605 # Name: not_defined # Def: hypothetical protein # Organism: S.mutans_NN2025 # Pathway: not_defined # 19 199 3 181 183 144 46.0 2e-33 MEDSKLNVYKETAKILRLLDNDRDKPSTKAIFANIRNSINKDSSVNMDALAFVFHNIPEE FLGSNKNLNDYEKAILTAVQMYALHQQAKVDTVLKLDYEEGEKKQNLGDALKTARDKEDD TKALDRRFNAMITSSNFDELSHHLRQMIKLLKAKSDVKVDYASLADDLYWFLKNQREGLK IKWSRSYYKFNKKEGDEKNAKQN >gi|229269867|gb|GG666044.1| GENE 214 236071 - 237759 1302 562 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20671 NR:ns ## KEGG: HMPREF0421_20671 # Name: cse1 # Def: CSE1 family CRISPR-associated protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 560 1 552 556 480 45.0 1e-134 MSEFNLIDEPWISVVTDYKGTTKLVGLREFFQNCHNYLELAGEMPTQNFAVMRFLLAILH TVFSRYDANGKPYEMVTINEKMQQVENVDEEYEEDYEDALMETWESLWKSGKFPEIVTDY LECWHDRFYLFDDNYPFYQVTKEEISESKISKTNPSEILGKNINRLVSESGNKIALFSPK YSSDDNKEILDYDEVVRWLISFQSYASLSDKVRFSNKSYKASKGWLFDLGGVFLSSDNLY KTMVLNLVLVNTSNTDYNTNIQNPVWEYKPSEVVKKYMSDNPINNTAELYTAYSRAIYIS DFDSEKPFKMGIVKLPEVLHSNNFLEPMTVWRYNKDGTNKGDFTPRKHQLNKSLRRSFGL ITETEDANEGNENTAKRKPGIIDWLNDVNDYIGDEFVKINAISMEDDGNAMSWVPTNEIV DSIYIEANLVNDLEDKGWIFRINKVVDKTKYIVDKIFRSFVNDTKKIRNIESNEYVSRYS ESLYYELDKPFRDWLISIDYSDNKDKKIDDWYKELKKISIKQAEKIVADSGPRDYTGIIE NDSVRNIATAFNFFMARINKEL >gi|229269867|gb|GG666044.1| GENE 215 237752 - 240505 2231 917 aa, chain - ## HITS:1 COG:ECs3615 KEGG:ns NR:ns ## COG: ECs3615 COG1203 # Protein_GI_number: 15832869 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Escherichia coli O157:H7 # 143 724 143 740 885 223 32.0 1e-57 MEKFLWAKKNRVKNIPMWLPLQVHLADTREVCGYLYNHWLSQGVRDLLMDSVVTDVEDKD ELLLNLCRFLGATHDLGKATPIFQVKKSFNGDFELDNLVLEKLVNAGFKDIDKFSLTKRE NIRHNISGQYLLTKFGVNFCVANIIGAHHGRPISEKEADICNSFASSLCQEDKTSSERAL FWQNLQKSIFDKALIGCGFSGAEDLPLISQPGQVILAGLLIMADWITSNENYFPLIAIDE VEVSPDRVEIGFKKWLDDRADAWTPHYYFDGIYNERFPFIEKPKDTQKKISKAISNTDEP GIFIIEAPMGIGKTETALIAVEDLAKKTNRTGMFFGLPTQATSNGIFTRVREWLDHIEGE KSLRLIHGKAQLNDEFSKLPKSRNIHGGDEVGVNEWFAGRKVSILDDFTVGTVDQILLVA LKQKHLMLRHLGLANKVVVIDEVHAYDAYMSVFLYRALRWLGAYKVPVVILSATLPISKR NALLEAYMIGAELGYDRLPKPEGFEINEAYPLLTYNDGASIKQFADFKKDAGRSYKIIKK SKGESEDLVSLIKENTAQGGVVGVMVNTVRKAQNFARKCIEVFGEDRVELLHSSFISTDR YKKEKNLIETIGKNGNRPDFKIVIGTQVIEQSLDIDFDILITDLAPMDLILQRMGRLHRH KETKRPENLKNPMVYVLNCGGYDFDKGSSFVYSEYILFRTEYYLPERINLPNDISHLVQL VYGDGDLDLDGDLQKLYEKYRDNRDEQIDDKEFRANVYRLDKPLKKIGDKKNLSAWLKNS NKMAESSDVKANAQVRDSSDTIEVIALKACQGGYEFFDKVGTLDPYDNKTAMEIAKRTIK LPNAVYFDKENGYIIDKVIEELEKYYLENLSAWDDQAWLKNSLAIIFDSNNEFRLGDKVL LYDEKYGLSVKKEDKDE >gi|229269867|gb|GG666044.1| GENE 216 240673 - 241215 775 180 aa, chain - ## HITS:1 COG:NMB0747 KEGG:ns NR:ns ## COG: NMB0747 COG0500 # Protein_GI_number: 15676645 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Neisseria meningitidis MC58 # 22 179 24 184 188 125 36.0 3e-29 MGKRVTDLVKIIIGSKKEIKVAADLTVGTGKDSKYILENTEVARLYGFDIQKEAEKEAKK LIGDDQRFIFHLDNHANIEKYIKEGLDLAIYNLGYLPGGNKEITTKYESTIKSLEKILDL LNKNGIAIITIYPGHPAGKEESEKIEKYLAGIDQKKYGLIKIAYPTRPNNPPYIIVVEKN >gi|229269867|gb|GG666044.1| GENE 217 241215 - 241766 691 183 aa, chain - ## HITS:1 COG:no KEGG:Apre_0222 NR:ns ## KEGG: Apre_0222 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 173 1 173 179 238 69.0 1e-61 MAYSYDQIYEDVLDLIKTHKTRDPRQILEERGVHIIPFKENTKLLGMYKIIMDSRFVFYN PYVDYRILNMVFAHELGHDIYHQANAKDTLVEYEIFDIKSEMEIEANIFAAHLLLDEKRL MDDIIEGYTYNELASMHDVNVNLMIFKLNEMHRMGMPIRKEGPSQADFFKEIDGKDLKNL RSY >gi|229269867|gb|GG666044.1| GENE 218 241766 - 242161 609 131 aa, chain - ## HITS:1 COG:no KEGG:Apre_0223 NR:ns ## KEGG: Apre_0223 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: A.prevotii # Pathway: not_defined # 1 126 1 126 129 157 69.0 1e-37 MSFASKLKSLREEKKLTQGELAEKVNVSLKTISRYELGISKPRYRKTYDLLADALNTSHD YLVTDEEDFILTTRERYGIKAGKEAEDLVDGVIGLMAGGEIPEEDKRAILDAISEAYYIA RQDSKKFRNKK >gi|229269867|gb|GG666044.1| GENE 219 242322 - 243563 1214 413 aa, chain + ## HITS:1 COG:BH1472 KEGG:ns NR:ns ## COG: BH1472 COG0389 # Protein_GI_number: 15614035 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Bacillus halodurans # 3 402 5 398 413 224 34.0 2e-58 MKRIILHSDMNACYASIEAKLNPDLKGKAMAVAGNPKNRNGIILAKSQEAKEMGVATGMP IWEAMTHCRDLILVSPHYDQYLKHSKMAKKIYYDYTNQVESFGLDECFLDVSGSTKLFGS GLDIAKEISRRMKEEVGLTVSIGLSFCKVFAKLGSDMKKPDAITVIDEKNWKDKVWPQNI EAMVGIGRATKAKLNHIGIYTLGDLAKSPVSLIQNLLGINGVYLWTYANGEDIRPVVDIG HEDIIKTIGNSSTCRKDLLNNGEVKNVIQELSFSVSRRLRESGLEANGVEIFVRDSDLFS QHFTDDLKLASQSSITLADAGFKLFCKKYDWPLPVRAIGIRATKLRPLGSGSQLDIFTEC DKYFKEESCDKALYEIRKKYGKDAISFAALKRDIKLPKELNEIITLPNRHYNS >gi|229269867|gb|GG666044.1| GENE 220 243635 - 244039 667 134 aa, chain + ## HITS:1 COG:no KEGG:Apre_0290 NR:ns ## KEGG: Apre_0290 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 129 3 128 132 75 38.0 8e-13 MTEKILTLLKEFLKNNNIEDLDIGEIMKSLSVDAIMSMISGNDEYVVKKNGNLEKFNADK LSRSIKNAADMAGMQLNSSDIAIILKDVADKLFHGDKKRLTRTNEVRNIVIDTLANEGFS KIRDAYEAYAQSQN >gi|229269867|gb|GG666044.1| GENE 221 244039 - 244521 567 160 aa, chain + ## HITS:1 COG:SA0023 KEGG:ns NR:ns ## COG: SA0023 COG1576 # Protein_GI_number: 15925729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 1 160 1 159 159 180 60.0 1e-45 MLIKIICVGKIKEKFYKEALAEYEKRMTSYNKVEIIEVADEKAPETLSEKEIDQVKNAEG ERILSKIKDDSFVVTLEIAGKALDSIKFARLIQDEMLDGFGRDMVFVIGGSNGLGENILK RSNYRLSFGKMTYPHQLMRVILMEQIYRAYRIINKEPYHK >gi|229269867|gb|GG666044.1| GENE 222 245023 - 246249 1355 408 aa, chain - ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 3 403 16 416 427 167 33.0 3e-41 MNLIVAQSGGPTSVINSSLAGVIDSGIDNDFEKIFVSMNGIEGIINEHIRLVDAEVFTKE NMTKKLKARPASILGSCRFKLNDDLDSPVYEKIFNVLKKNDIGLFVYIGGNDSMDTVKKL NAYIAYKNIEGINVIGCPKTIDNDLEGMDHSPGFGSAAKYIASTLRSLRCDVDIYDLESV TFVEIMGRHAGWLAASSLISNYNYHKDLVNLLYIPEDKISIDELLGDIKEALKTDKNLLV AIAEGFRDVDGILSEEVFTNTKDGFNHPIVSGVGQRLADLVRDRLKIKSRAVELNIVQRS NTLISETDSREAYKLGYKAVELGTTRTNLVPVLRRKEGEAYEVYYTEVSPEEIANREMKI PQDWLVDKKTLEKKIQAYALPLIAGEVKQVYEKGMPVFVRIEDFTREI >gi|229269867|gb|GG666044.1| GENE 223 246246 - 247064 808 272 aa, chain - ## HITS:1 COG:CAP0070 KEGG:ns NR:ns ## COG: CAP0070 COG0561 # Protein_GI_number: 15004774 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Clostridium acetobutylicum # 3 266 5 278 283 152 34.0 5e-37 MKKLIAVDVDGTLVNSEGVITARTREALIAASKAGHEVMIVSGRPTYGLREQAKALAFDE FGGILSSYNGGQLYDFKADTILVNHPMDFDLAKEILEFSKSLDLILMVPHGEVIFTDDAE NFYSSRESGMLKMEVRGVRDIRDSLDFAPNKLLFAQDPDKLDAPCANIREKFGDRTEQVK SARFYYEVMPMGLSKGSSIIEACKIFGIDIKDTIVFGDEMNDMSMFEVAGTGVAMGNAVE PVKNVADFVTKTNNEDGIAYYLEKFVLNKENK >gi|229269867|gb|GG666044.1| GENE 224 247097 - 247558 502 153 aa, chain - ## HITS:1 COG:SA0183_3 KEGG:ns NR:ns ## COG: SA0183_3 COG2190 # Protein_GI_number: 15925893 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Staphylococcus aureus N315 # 13 153 1 143 143 114 41.0 6e-26 MVDFDDKLFFAPMTGEVLDITECVDPIFSKSIVGAGVLMVPSDSKVYAPCSGKVTIVANG KHGMAIKNPSGLQVLIHIGIDTVDMDGEGFKTYKKVGDEVKVGDLLLEFDLDKIKSCGKN IQSPVVITNPVIKKVDVLRSGLVNFGDELFRIK >gi|229269867|gb|GG666044.1| GENE 225 247801 - 247998 365 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485469|ref|ZP_03915785.1| ## NR: gi|227485469|ref|ZP_03915785.1| hypothetical protein HMPREF0072_0872 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0872 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 65 97 100.0 4e-19 MFNNKYKNKPNIISRLAKAAFMVGAGAYLVVKNKKEVQETVKDAKEKANRVKDDLIDAFS GEELK >gi|229269867|gb|GG666044.1| GENE 226 248049 - 249260 979 403 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149002994|ref|ZP_01827905.1| 50S ribosomal protein L33 [Streptococcus pneumoniae SP14-BS69] # 4 403 6 408 409 381 51 1e-104 MGKVNVNNEIKTLKKVMLHRPGEELLNLTPFLLEELLFDDIPDLAKAQSEHDAFAKILRD NGAEVVYLEDLMTETLDSNEGLREKFLNQYLEEANIKNENLYKESEAFLKSIKDTKAFVE KTMSGITLKEIGGFKNIDKIVSNEAYTAIYPMPNLYFTRDPFSSIANGVSINCMHTRTRR RETIYADYIFKYHKEFGGTRDFYGRTSGHSIEGGDILNINKNLVMVGISQRTELDAIKKL ATNLILADDNEVKQVLAVNIPVERAYMHLDTVFTQIDHDAFTYHPGIMSTFHAYSFTARD GEVISEQLDKSLQDLLKDALGLDHVKLIPCGGGDPIAALREQWTDGSNTLAIAPGKVVVY DRNNVTNDVLEKEGYEVLKLDSSNLTVGRGGPRCMSMPLVRED >gi|229269867|gb|GG666044.1| GENE 227 249596 - 250264 502 222 aa, chain + ## HITS:1 COG:no KEGG:FMG_1337 NR:ns ## KEGG: FMG_1337 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 222 1 222 232 157 38.0 3e-37 MDYFFRTTPDAGFTFNMHLVRLGLVLFLFIVYQFRQKAWLLKTLLVSSICLQGVLYWWYT LDHNILIMEGLPLYHCRIAGICLPLSFFLKREKARTFFADLALVGTLVAFAVPDPSNYAW PHVTNATYILNHYVLMACGLLVTVNYKKSLPVKDIAINCFVINLIIFIVDLTLNANYGYL TKVPIEFFAGFPAIIVFIAMTLLMILSLSLVEKLKTRLGTKK >gi|229269867|gb|GG666044.1| GENE 228 250619 - 251290 875 223 aa, chain + ## HITS:1 COG:L82453 KEGG:ns NR:ns ## COG: L82453 COG0791 # Protein_GI_number: 15672466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 4 121 5 118 259 112 49.0 5e-25 MTQEKMIDFALSKVGRVAYSMAYPQRLGPVFYDCSSFVYYSLIAGAYLPKGTAIGNTESL YRLKGKALIEIYTYEEVRRGDIFIRGIQGKSQGAGGHTGIFLAKDRIIHCSYKANGVTIT TMQNGLRSVLDLKRSPRERYFRPVTKPHQRAQQIIDKIGMAIIKVATNVRTAPTTQAPIV ACYYPGEKVYYDKLIENENHTWASYIGRASGERRYVAIAKGAN >gi|229269867|gb|GG666044.1| GENE 229 251489 - 252196 822 235 aa, chain - ## HITS:1 COG:TM1429 KEGG:ns NR:ns ## COG: TM1429 COG0580 # Protein_GI_number: 15644180 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Thermotoga maritima # 2 228 1 230 234 151 38.0 1e-36 MISKLIAEFLGTALMIIFGVGVHCDEVLNKAKYQGSGHLFAITTWGFGITIVLVVFGDVC INPAMAFCQAILGLIPWAYFVPYVIAECLGACVGALICYVLYKDQFDSSLDVDPVKVRNI FSTNPIFRNLPRNFFVEFFATFIFLSSILGLVKNQPNFVPIGVGLLVWAIGMALGGPTGF AMNPARDLGPRLAYSLLPIKNKTDNDWQYGLTIPGLAPYVGAIAAALFARFYLGF >gi|229269867|gb|GG666044.1| GENE 230 252213 - 253490 1662 425 aa, chain - ## HITS:1 COG:CAC0769 KEGG:ns NR:ns ## COG: CAC0769 COG3875 # Protein_GI_number: 15894056 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 424 6 426 426 591 69.0 1e-169 MFKINVPYDHTSMEVVLEDKNFAGKLEGKQTHYVASKSQEDLVEDSLDNPIGQKSLEELV VGKKDIVIISSDHTRPVPSKIITPILLRRIRSANPDARIRILVATGFHRPSTREELINKY GQEIVDNEEIVMHVSTDDSSMKEIGTLPSGGACIINKIAAECDLLIAEGFIEAHFFAGFS GGRKSVLPGVASYKTIMANHSGEFIDDKHSRTGNLNHNLIHEDMVYAARTANLAFIINVV LNGNHEIIGSFAGDMEEAHKVGCDFVRELASVKKIDCDIAITTNGGAPLDQNIYQAVKGM TAAEATVKEGGVIISCCACGDGHGGEGFYHNIADVKEAKEFEDMAINTPRLETVPDQWTS QIFARILSHYHVILVSDQVDEKLVTDLHMQLARTMDDALKLAFDIMGKDAKVVVIPDGLG VVVEE >gi|229269867|gb|GG666044.1| GENE 231 254059 - 260136 7500 2025 aa, chain - ## HITS:1 COG:no KEGG:FI9785_83 NR:ns ## KEGG: FI9785_83 # Name: not_defined # Def: putative secreted protein # Organism: L.johnsonii_FI9785 # Pathway: not_defined # 1353 2009 697 1375 1423 201 30.0 3e-49 MNNKKSTILVAALSLSFVLSTQSVLAVEDQAGQAGYVSETDSSGKSADTDLIFTIDQQIK LSSAGYSPEEIIALDKKAREEKAALGQDFDLDKFVKDKIAEKENAGLGISDPVVNDRVGS PSSEDRDAVDASSSATYYKKANWENKIKDKSRWKVEDAQNLVRVGGGDPLQMNDIDYDGM FIDGNGRYVIRLVYKEKSQALSGVWYRALINFGDLDKYIDYDLSYVLGKDGKTQYKFEDV QNVVGKGFDLGRAAGDRTTNRANLPINLVLKEGIDLKTLGNENYIVQMRITDGNYNRVYA YAPGKTSMDYSTYTKTTAVDLADKLGTLFIKGGKQSDLNNATNQEFFMSEFIANPDQYDD KLNLGIIRTQYMGQTNTIVRETVGGQPIAFTQVFDANLVNYLKADKAGNVAYVNVLTNGR VLSPVTKNVGIPLDKINYSKDRKLAYIVIGTEAFKKDGVQVVTVPKLDQHVMLSGFYITA IDYVVDKGKFEDTFAGRTQGIDKTRKLNYSMMSGWTNPNNDGWTIYEKDYDDDYVVPEGD SYLIDTGEDPTGGQIMLQIGGEQAILRKPQGYYNGYVSGSGANDAIEKYANGVYEIKLRE GATILQGKKLKLYMPYTSSHDKQVNFLEIHNGTKLNEGGATLTLQTNRNIKMHLYKQNAG YYKLKYTLKDETEGSIEFKKGITWMFKDKDGVMTGTPNRALLPSGGTFYIDTTKLKTGAD IFVESYDAKGNKIDSETSWFKYKPLEKSKDNVKLLTWTDHSDKKSVLSINKSLYTPYQQI FTNDYAGGNVYENPKALPADEAAFNTDTKQIVGYTKYDGGKVRTLFEGGKTGNFIAKVEA EANEYDDKGNLKEPDVRKDITIKKDNIFDPHFDGNNKIYKAYQYRVDLAKMLAYHSDDDK KEHELKLLKDMKFVSTASDGSSLPSDLYETRVRTRVLFDATDGQFADSNKKSVKIVPDNV KFYGEEGYVANGFEGANVEANTGDKFPENPKLDGKNFLGWVTEAGKKALGGKAVVTADKF NALSKDQIFTNETPITKHLVVYAVYSDELTVTFDANQGRFTDGKDTSNVKVNNGSVTAPT PTRDGFTFKGWAADKNATEADANILNNITAPKTVYAVWEKKDKEPLQLNDPTPVEVKDTK SLSSDEIDKVKKAVAEANKDKGITEADITVAEDGTVTVTKDGKTGTLAPEKTVKQKEVQN EFNPPKEPVKVDKIGELKPEEIAEIKKAVKDANPDRNFKDEDITVEADGTVKINQGGKVG TISADKTVVQKDTILDLTAPEKTEVRDTTNLTQEERDKVAAAVKKANEGKLSADAKVTVD DKGNVTVKDGTKNGTLEGKDTVKKFDRTGKEIKAPAKTKVANTDNLTDAEKQAVREAVKA ANPHLYLKDEEIQVDNNGAVSFPMGQGQGTFTPEQTIEQATQDDKIIKLVAPAKTPVQNL DQLTAEEKEKVKKAVKDANQTLSDTANIQVAEDGSVVVTDGDKTGTLSQKDTVVDDTTKL TLNKPRPVKVKDPQNVTTEEQAKIKKAVKDVNPGLTDDQITVDDKGNVTVTVKETVDNQE VTKTAKLGPEDTIEKDETLNAPTPVEVKDPSKLTDEEKKAVEKAVKDANSTLPADATIEV GNDGTVTVKKDGQVIGTLTPAQTVKKAGAVVAPANPVEVKNPSELTDEEKEAVKKAVKDA NSTLPADATIEVGNDGTVTVKKDGQVIGTLTPAQTVKKAKIGGSTGGSTGSVFPPISDGS GSDDSGDADEDSSLKPIDKVEVKDKDKLTDAEKKEIADRIKEKNPGIKDVEVDDKGNVTV TKKDGTKTNVPAGDVLKEAASKNPIQPIDKVDVKDPNKLTDAEKDAIADKIKKNNPTVKD VKVDDKGNVEITNPDGSKTKISAKDVVSEAEDVKVVIPKDKVKVKDLDKLTEAEKKSLLD KVKKANPNAIKVEFDDKGNIVLTFDNGLMTSLPYRNLVTKVQKGAVMVPHKSKSEGEAPL RNRKGNKGARNVKTGVSEVGGLFGVVGTAIAGLFVTRKKEDEEEK >gi|229269867|gb|GG666044.1| GENE 232 260689 - 261372 524 227 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485476|ref|ZP_03915792.1| ## NR: gi|227485476|ref|ZP_03915792.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 227 19 245 245 236 99.0 1e-60 MEWDPALGVAANGNIYTAKFKKQGGGEPTPQPPTPPVPTPDPTPTPDPTPTPDPTPTPDP TPTPTPEPTPEPTPEPTPEPTPTPQPEPSGEDDKGKPTIADENPPVIPKDKTGVKDPEHL DDGEKKKIIEKIKKVNPKAVDVKVDDKGNATLIYADGSTNFIPAKKLIYKLARKVSKEDA SGPFRMKRGARNPKTDISSLGGVVATLVTAATGLFVTNKKMKDENLF >gi|229269867|gb|GG666044.1| GENE 233 261808 - 266550 6093 1580 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485477|ref|ZP_03915793.1| ## NR: gi|227485477|ref|ZP_03915793.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 1578 1 1578 1578 2613 100.0 0 MKIKSNRLLSFLLAFLMFFPVFGALLATAKPALASSEDLKGEVRGSQKVFTIDKEKIENI AINTQAKKTLRRSRRSLFSDRAPSTQDANTIVNLTTKGLNNGNFDWKVFNNSEFKVTLGY TDNSNKFVEVGEMTFSEGQTKITNYSDWPLYAANAKGFQLKTDFNGNYDVRATYVSPSTK PNNNVLELNLTVYELPNTDLKVEYLDIYGKKLAKDLPVATDTAPKLKLNLGDGVEFDLPK ADKVINLRDLDKVEEDIDSDTADNLSEALTTDNLNAVEKLSFTINDAISGDYTFGGGASA KNYKYKIHHVKHEKNGQAHDYQPVVSLTYQADVAIPPMKDDDPTQPVDVPDGYYRLTFNA DEKVEEGKTQTLGRFDSEGTKKKYIDVKQGLKYGNAKLKAEIDKLKPYALDDKDNKNDAK PFLKWNPEIPADTEGIGTKEYNAKYKTTADLIKELGGLKGVDFGVWKGTSTEGDFWKKGV AANTTVAENKAKIDDALAGAKVEDTTNPARTTTEKGEKKGTLKVTFKDGSVYVVKENGAT EAEKTNIAQTLHVYDKGDKKPDPQPGGGETPVPEGTIFVEFKRDETSIKKDGFENLKPLM YAAGDTVDSEKFPKAKPETGYQTVTWTPAKDTVLSTTNQAYKEATKTFTFKASATKKNAK QLIEDAGGLKPVDISIWSGDTITWSKGVAINYDQTKTFTQDQKTELENLLKNATVTDATT PARSNTTLGKQTGTLKVKFADDTTENPSVIEVENQNLYVRKNKEEINDDNKDFPVPKDED GNPTGFNVIFKLGEGTKLGDTKGNKATPVTVKTILVKKDETLDVARDYPQAEPDEGYKQP VTWSPENKKITAETTYTATATNAKFDKTNIAKIEITKDPDTMTYTEGDKPKHDGIKVKLT DKNGNTVEIGKDKLNEYGVTVTPSEDTPLTIANHNGHPFTAKVSGKDDQGQDKELTANTR TNITVNPKKSDKDVIPYVPKDKENPTNPDDDNVPKKDGDGHTIDKTQYDIIAFKVADDDK TKGSLTLDDKTNQQVISVLVKKGSTWAKVSAPTINVNDATTTKANGYNPTIPANTEAVVN GKVYTAQFITDGQEITPGTKLPEGTFEVKVLRDENSIADNALYGKSYAVFKNSKLAKEKF PTPAVLNNNFKDPKWNVNNPWDQTITKNTDFTASAISANFDKDNITCIEIIQDPAQMTYT EGDKPKHDGIKVKLTDKNGNSVEIEKKDLGTYGVTVTPSESTPLTQNDHNNKPFTASVND KNGRPLTAETQGKITVNPKKSDKDVIPYVPNDKTNPTDPNDPNIPTTDGDGKTIDKSQYD IVAFKTESTEKGTLSKGKETDKDVISVMVKKNSNTKFGVAKPSVIEKTDYKLWYWDEKGS PKTKVEDTAVVSNGQVYTAHFIKNGQEINPGDPELPKDGDGNPLVFKVEIIKGENVKAND GYGKTHAVFKNSTLQAAGVTKITPEAVADTATEKYDVAKWYKNTETTETANPWTETIKAD TKFTAKAAKKAQPQPPEDNNTGDDVIPYLPTEDVPTKGSDNKDIPATYITVTFKAEVKDG TAAGTVTVKGKTGAVVYANS >gi|229269867|gb|GG666044.1| GENE 234 266604 - 272132 6251 1842 aa, chain - ## HITS:1 COG:no KEGG:FMG_1334 NR:ns ## KEGG: FMG_1334 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 14 1003 28 1009 1224 219 26.0 1e-54 MCIDKCMNNTGVIMKNKKMKRRLLGSLLAVAMLAPSTGNVLAETYKAPGKDEILTTDWQL KEPNFKDKNFWPLARAQWLTEVSTLAEPMKNPMISYGGYFVRPDGRTVIRLAMRKFDKVG TGVWHVMHMKLEDSFNNKVDWSDPSTGIYKGVSAGSSTGWYNDDLNYKTITKFQDKSITD VGTTNVKMVNIADNGNTGATAATNEVPINLVLKQDETIKSIGDEPLVQIRMLDRSETQVA CYTDAGTGKGNYSSYTFSNVIPIKHDYEQHLLKEIRNSATTDRAFRASGSTVEFNKEKGY IEVRHRYNKVAITSNDLYGRHLGYRQTVDGRFFDILKPRKINGEDVIAHVFSTSNNGLPT AGRLDANGNPTVTGAVPVFEKNVNEIPGTNLKFIQIAGPGFDTSFQDQQGIKTNKTKLQP LDSWMDGVESLLNNGQGTTVRYYVDPKKVDKLFKEDDGLQYFPFYSAIISDNEAGQYKYE YELDHDVTLNSGDKIYIDFKTPYGGGILQDGARPRNREMRITVKGDDTDLFLASNFRHNG SGKFYEYTVQNGMDMKLKAGTKLTLYTNYPDGGDATIYFNKNKANSYKASYTLDKSPITF DWQATFSAGAVATTFHKPDVDEIFLEDKNISGRTAYKNAEIAIKAGDSVQTIIAKPGKNN SNGDTRIDVVVNKVKTKGYEFDTKLPGLEKDGKTARTFTMPELKRDMPILFTNTNVEVLA ESSRPAVVEQVQAKVNFDLNGVKSKENKDVIEKIAPLSKEYTNYVIDKLAADKKTVEQAS GAENKNYKPSGFNDDNVKKDQKTPIVKVTENIDGKNVDREFVNVLNHDGKTYDRGNADPE IAKKELAALKLRQMPDKYDIDVPQGKRLLGWTTVKLEDKEENGETITAADQFYKLQEDGK ILKDVKDWEKVDNNTETFVFDEKSPIDKNRTVYAVYGDGINIILHSNNTADPKDEVIYKV PVTVDDLDRTNNILDATTAATYKDKKGKLVIKQLPKVPYTSEADDVNKITDSKLKKFFKK GTDQDPDKQYTFIGWTFGSYQNGSLTRPDTNNFIAGSANERVGELEAGLVANGTKRIPLK TEWIDGLKKNTTAYYVPNGFNLAIAPEDVLDGNDVDNTKTLIKEAFEKGKDVHLYANYRP YYDITVKASYKDIDLTGYDEAQKKFGEYKALADANKKKPANIGLLTRTAVTPYGKPTVHQ NANYYPFKGGLKAWDGTDQDFKWSLPGFDELGQRKSYVSVVVTDDLKDKYKDFSVPNWGT LGLKTFLRLNNADGSVYVDDKAPKNLHHDAGNPYGDPVAKSQAFNIGVDAYSSATSRNAE TVRRSSGREVVGYTIWNTSTPIDIPKPAIDNVFDTDKTIKLKWSEAEKTAGIEKIKLAIA GGSEIVLVKQDDGTYTGGGLTAKVGEGKYADRLIVGEFKDGNTLSDKAGEKIIAKYAVKK ATLEKDGDEGEIDINKRGTAAPVYGISQVDNVEEGTGENKIIKPVIKFDIPNPALNKPAV GNKTEKYDWAERFWTDEEWDKVESKFTQKKTDTQAGDYTEDWNGSEYIAQKWNGSAWVNI ADTSKYTMQGKDKLGDAKTIVLEPKSDTNPNGVEDGDIVRIVSRQAGLHTSASTQTMDTL GAITGKFTDELNNKPIDKNRRYVIIDLRAPAPTVKTEDEKFRRYIDVTGTLDEVTKGRKI TLEVNYKDGTTETFTPEVKVVNDEVKLKDFLSTIVRKGDTPDITIVAEDEFGNTKRYKVN YKPTLVCNAYVKDFYVRSRRLSATSDMDGVTVKVVVYKGMEEVATGQATVQTKEQYVPLD LKQKADSTKNYRLKKGDIIRVNSEKDAPEGKYTSNTFDIFVE >gi|229269867|gb|GG666044.1| GENE 235 272396 - 272878 655 160 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_1319 NR:ns ## KEGG: HMPREF0424_1319 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 3 159 2 172 174 134 42.0 1e-30 MKNFNIFAKAALIFGLALAMSACGKSKADVEVGSDNLVSFEETEKDFVGSCKKLAWPEGY EVPEHLDDVKDANFEAGYGNTRASQYWEAAWQEEWLNNYKTNPEKAKKALKELEKATSMP YLGPDKCDDNTRKAFKDSLEKAKAGDPSGFEENLKLNDPR >gi|229269867|gb|GG666044.1| GENE 236 272914 - 275208 2788 764 aa, chain - ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 3 476 6 496 496 435 50.0 1e-121 MKFLSTRDSLLRISAREAIVKGISDDGGLFVPEYFPTFDISENLNLTYTEMAHKVLSLYL TDFDSDELLYLIEKSYQTFEDEIVKVACQKDYYLELYHGRTSAFKDFALCLLPNLLAYAK KSLGIKDKTLILTATSGDTGKAALEGFYNTEAIDILVLYPTEGVSDIQKTQMDSTASLNS KVIAIDGNFDDAQTAVKKIFNDEAIKKELKKKNTYLSSANSINIGRLLPQIVYYFYSYAN LVNNKKISVGDKLSFCVPTGNFGDILAGFYAKQMGLPVDKLIIASNDNNVLTDFFTTGTY DANRELIKTISPSMDILVSSNLERLIYHKSSAEVVRAKMRDLKEKGTFTFACDFSEFLSG YATKEDTEQTIKKVYQDEGYLIDPHTSVAKAVVDKLGLSKVAILSTASPYKFASSVLKAL GENPVADEFENIKTLYEKTRVKIPREIGKLKGKKIIHKTKIKKDEIADEVLKFAGRGKRI SVPATSANLGPGFDALGVAVGLYNTCEFKLTNDDEGFRQNLKENLIYQAYKKTFDTYKET PKPISFDLDADIPISRGLGSSAACIVMGIMAAFLVMGRDIDKKEILKIATAIEGHPDNVA PAIFGGTIVSILEDEEVFLEKMGISDKFKFLALIPDFKLSTKEAREVLPEFYPKADAVFN ISRVAMLVLALQSGDENNLKIALQDKIHQPYRYKLIPEIEKIEQIIKESDVLASYLSGAG STIMLVLKADDDISEKAIREKLEILSNSYQLKALAIDKKGAFII >gi|229269867|gb|GG666044.1| GENE 237 275205 - 276371 1277 388 aa, chain - ## HITS:1 COG:BH3422 KEGG:ns NR:ns ## COG: BH3422 COG0460 # Protein_GI_number: 15615984 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Bacillus halodurans # 1 342 10 360 431 213 37.0 7e-55 MGFGTVGTGVEEILYKKRARLRQNNFDLDLAYALIKNKDKKRSPFKKDLIFTDDFEKILS SDVDTVIDVTSSFDETYERIIKLMKAGKNIVTANKAVVSKYFENLNDLARENGVYFAYEA AVAGAIPLIHPLMEEALFNEMTKVYGILNGTSNYILSKMEEEGASYEKVLKKAQDLGFAE ADPTADVGGFDAMRKLRILSSLIYNSKINEDAIPTFGIGNIKKTDLDFAKAMGYTIRLLA KSELRDGKINISVIPSFLKDDFFAKTFEATNAIKVWGENFSAYEFKGPGAGKLETADAVI RDLLRILSKREIPAFYDGANSYKLEATRSNKFYLRTSLVPKALKDLIEDEKVIGDDHQII TKKTDFETLRPILSALSDVFVAEIEEEL >gi|229269867|gb|GG666044.1| GENE 238 276388 - 277365 1049 325 aa, chain - ## HITS:1 COG:aq_1866 KEGG:ns NR:ns ## COG: aq_1866 COG0136 # Protein_GI_number: 15606903 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Aquifex aeolicus # 1 325 1 337 340 356 56.0 3e-98 MKVNLAVVGATGLVGSMMLKVLSEENFPIDKLYLFSSKKSAGKKIEYAGKEYTVEELKED SFEGRNIKIALFSAGASVSEKFAPLAAKAGVTVVDNSSAFRMDPEVPLVVPEINPDDIKT NKGIIANPNCSTIQSVLPLKPIHDKYKIKRVIYSTYQSVSGSGLKGISDLENGTKLAYKY PIQNNCIPQIDSFLENGYTKEEMKMINETKKILHDDSILVTATTVRVPVKFSHSISINVE VEKPFEVEDVKKIIGTYPGMVLQDDLANAIYPMPLMAAGKNEVFVGRIRRDFTVANGLNL WSCADNIRKGAATNAVQIAKKLLED >gi|229269867|gb|GG666044.1| GENE 239 277367 - 278674 1522 435 aa, chain - ## HITS:1 COG:CAC0278 KEGG:ns NR:ns ## COG: CAC0278 COG0527 # Protein_GI_number: 15893570 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Clostridium acetobutylicum # 3 431 5 436 437 438 54.0 1e-123 MKVAKFGGSSLADAVQLKKVRDIIFADDARRYIVVSAPGKGVNNNHKVTDLLAMCHQLSN HDLNFNEVYKIIEDVYKNIVDDLSLLIDIDKILAEVKEEISKGASYDFVISRGEYMSAQV LASFIGYDFVDAKDLIVFTDGVLDLKRSQDAIEKVLANHEKAVIPGFYGMEDGKVKTFSR GGSDVTGSVIAAALGADMYENFTDVSGFLVADPRIVKNPAPIGTITYKELRELSYMGANV LHEEAIFPLRDKNIPINIKNTNKPDKPGTLILSKCDIKNKNILTGITGKKDFTVINLEKV NMNSEKDFFRKLTTVFESNDISIEHMPSSIDSVSVLVADSYITPKLNKVLEELKIYLNVD SISWERDISLIAVVGRGMIKEKGVSSRTFTALAREGVNIKMISQGSSEINIIIGVETKDF EKAIQSIYDEFYKEV >gi|229269867|gb|GG666044.1| GENE 240 279012 - 280211 1054 399 aa, chain - ## HITS:1 COG:SP1716 KEGG:ns NR:ns ## COG: SP1716 COG1668 # Protein_GI_number: 15901550 # Func_class: C Energy production and conversion; P Inorganic ion transport and metabolism # Function: ABC-type Na+ efflux pump, permease component # Organism: Streptococcus pneumoniae TIGR4 # 1 384 1 381 399 144 27.0 3e-34 MNRKLIVALDSFKKQIKSPAFWAMIFIPILVMLIPAGISYFLAKSDDAKLGSDGHKYQIV ADENISPFFKGMENEYKIVSKEVAEKALKAEKIESYGEIIESKGQVKLTIETKTMGGNAL SKLPLLANEIQNAINIKNAGLNDKQVGIFSTKADVKINQLDKGKSIMVYASYFILLMFMY FMLIMYSNVLVVDIATEKGSKMIEFIFSSVSAKDYFAGKILGNFFAIIVHSLIYIILGAI SYFIAKSKGLLDMIKINISLDQRSLMLIAEIFIFIILSLLAYMIIAAMLGSLASKQEDAS KVASPLMITIVAAFMVAMIFMNRPVNIFVKIASYVPYISVFFMPLRLIKGNCGIIEGGIS IIILVASLYISYILASKVYKKHILNYSAASFFTRKRKKK >gi|229269867|gb|GG666044.1| GENE 241 280204 - 281088 928 294 aa, chain - ## HITS:1 COG:L18206 KEGG:ns NR:ns ## COG: L18206 COG4152 # Protein_GI_number: 15673757 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Lactococcus lactis # 2 293 3 297 310 231 43.0 9e-61 MIEIKNLSKNFGELKALDDVTFEVQKGELFGVIGQNGAGKSTLFRSMMNFYDHFDGEILY EGEKMSKVPLEKIGFLPEERSLSPKKTIREEVKFFARLNQMKNLDEKTLQSYFDRFEIKG SLDDKIKSLSKGNQQKVQLLASLIYKPEFLILDEPFSGLDPYNANLLMGIIKEINAQGTT IIFSSHNMENVEYLCDRIIMLKNGKIVLNGSPNEIRNSYEKDLVKVRTEENLSEIFPDYD LKRESNLWTIRLAKEEDGRKIFEKLVEKLGYLEMFSQEPPSLNEIFARKVEENE >gi|229269867|gb|GG666044.1| GENE 242 281085 - 281807 639 240 aa, chain - ## HITS:1 COG:no KEGG:Apre_1654 NR:ns ## KEGG: Apre_1654 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 35 214 29 213 233 80 32.0 8e-14 MKNNRKIGISKLFILAFLGLVAGFGIGFIFNKLNIGGLTEIINTFLSENALLLSIVINTL WAILAIYFYMRAKKEVELGLAKDDFIETKYIDYTHSMRDAGLFTLLSFIIILYNKVKFSH NPLKDSIILTSVLLIFTFINVFLFYLTYKLTKKIEPERKTEAFDIFFDKKFMAESDERDK LKYYKKGYLAFKRMIICQLVIIIILFCSALYEEISPIIALIVLIPTLIGILTNGFAGEKS >gi|229269867|gb|GG666044.1| GENE 243 281797 - 282009 289 70 aa, chain - ## HITS:1 COG:SPy1386 KEGG:ns NR:ns ## COG: SPy1386 COG1476 # Protein_GI_number: 15675312 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 3 69 5 71 71 68 53.0 3e-12 MELRNNLADFRKKAGYNQAELGGLVGVSRQTISLIERGDYNPSVTVALTIAKVLGVDINE IFRLEETDEK >gi|229269867|gb|GG666044.1| GENE 244 282282 - 282965 879 227 aa, chain + ## HITS:1 COG:lin0786 KEGG:ns NR:ns ## COG: lin0786 COG1811 # Protein_GI_number: 16799860 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, possible Na+ channel or pump # Organism: Listeria innocua # 1 220 3 226 233 126 36.0 4e-29 MLGASVNALAVFISGLFGLKLANYIKPSYKDAIMKFLALTIVAIGIESSLKGDMLIILIS IILGVIIGEFFDLEGKLTRFANMLKDKFIKNEENDFATGFVSGTLIFCVGSLGILGAIEA GVNGNNSILFTKAIIDSLSSIFLSTTLGIGVACSAGMIFAYEGLIALLSGFLAPILSPEI LANISGVGGITIIAVGLSMLDLVKFKLVNSLPAIAIPVIIGLIMNLI >gi|229269867|gb|GG666044.1| GENE 245 283107 - 283964 817 285 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485489|ref|ZP_03915805.1| ## NR: gi|227485489|ref|ZP_03915805.1| hypothetical protein HMPREF0072_0892 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0892 [Anaerococcus lactolyticus ATCC 51172] # 1 285 1 285 285 529 100.0 1e-148 MQIRPLQRPDLAKVRSLLDLAVGDKTHFSYPRFYKINDIFRELEYSIEFMATQTLVAEEN GKLEALATYFWDDDEKYIQTTLLVIKNKDIVVFEKLISHIKNDCKDYRLDLGLSHTCWLN DEEYFKDKAQIIDYSHVLEAKNISQKTEEIKGIRVLSKEDFQKYQAFHDKFAKEMYYNSK NLLRDFDRFRVFVKEDKGELVGSLLVKIYGENPCKSEIFGIFVGENQDKSKICDELLKAM TNSLIDEFGKISTIKYFVEVDKKIELKIALANGFENLDTYILYKI >gi|229269867|gb|GG666044.1| GENE 246 283964 - 285232 1592 422 aa, chain - ## HITS:1 COG:SA0819 KEGG:ns NR:ns ## COG: SA0819 COG0334 # Protein_GI_number: 15926547 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Staphylococcus aureus N315 # 1 420 1 412 414 371 44.0 1e-102 MTTAYEQFINLQKKLKEVSDLAGFSESFYNIIREPERIIEVNIPVKMDDGTTKTFRAFRS AHSSALGPSKGGVRYDESVTYEEVKVLSTLMSLKVALLGLPLGGGKGGIVVDPKKLSERE LEALSRGFVRAINNYIGPRIDVPAPDVNTNAKIMGYFTDEYIALNGNRHDIATFTGKGTD MGGSLGRSEATGFGVYLTIKKYYEKIGKSLDGATFALQGFGNVGSFAAKFLTEDGAKLIA LNSKDKSQKSGSSAIYDPEGLDVKKLEKAREETGSALNIEAKKITNEEFFALPCDILIPA AMENVIDETNAGDIKASLIVEAANGPVTEAGEEILNEKNIPIIPDILANSGGVLVSHYEW IQNMTGSYWDDDEVRTKQEKDMSKAIGEVFATAEKYKVNFREASFILSLSRIEKSLKLRG RI >gi|229269867|gb|GG666044.1| GENE 247 285436 - 286020 833 194 aa, chain - ## HITS:1 COG:TM1296 KEGG:ns NR:ns ## COG: TM1296 COG3341 # Protein_GI_number: 15644051 # Func_class: R General function prediction only # Function: Predicted double-stranded RNA/RNA-DNA hybrid binding protein # Organism: Thermotoga maritima # 2 190 6 195 223 133 39.0 2e-31 MKYYAVRKGRNPGIYTSWDSCLKEVKGFSGAIYKSFKSKDEAIAFMEGAEKEIEIDADTV VAYVDGSYNLPEKTYGAGVVLIKDGGEEHFKKSYTDSYYTHRNVAGEVKASELAIDIAIE KSYKKIIIHHDYQGIQAWAEGDWKANNDLTQSYKAFINDRKKHIEIAFVKVKGHSNDKYN DLADRLAKDACGIK >gi|229269867|gb|GG666044.1| GENE 248 286017 - 287474 1877 485 aa, chain - ## HITS:1 COG:SP1382 KEGG:ns NR:ns ## COG: SP1382 COG0366 # Protein_GI_number: 15901236 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pneumoniae TIGR4 # 1 478 1 480 484 458 49.0 1e-128 MANEVMMQAFEWDTDGSGNFYKNLSRDAKDLKKAGIDALWLPPACKGGGDNDVGYGIYDL WDLGEFDQKGTIRTKYGTKDELIKAIADLHQAGIKSYADVVLNHKGSADYKEKFKAVMVD QNDREKDVSGELEIEGWTGFDFEGRNNKYSDMKWHYYHFTGIDYDAKSETSAIYRILGDG KYWDKDVSNEKGNFDYLMNCDIDHNHPEVRDEIFKWVDWFIKETKVDGFRYDALKHISGD FIYDLSKHIYDMMGKDKFYLFGEFWQYNTGAIESYLQNSDYNIDLFDVPLHFHMAEASKS MGEYDMRKIFDGTVVKEFPAQAVTFVDNHDSQPGQALESWVEDWFKEIAYALILLRKDGY PCIFAGDYYGLIGPVKKEAQKDMLDRMMAVRKAYNYGEEDDYFDHPSVIGWVKRGDEAHK PLAVLISIKDMAEKQMFVGEAEAGATYVDLSGKNEEITIDENGNGVFTVGPGQVTYWANK ESLNK >gi|229269867|gb|GG666044.1| GENE 249 287477 - 288112 917 211 aa, chain - ## HITS:1 COG:L63310 KEGG:ns NR:ns ## COG: L63310 COG0274 # Protein_GI_number: 15673422 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Lactococcus lactis # 1 208 1 210 220 207 58.0 1e-53 MKLNQYIDHTNLKADAKKDDIRTLVDEAVANDFYSVCVNSANVAMIKAYNKDVKIAAVVG FPLGAMAKEAKVFEAKKAIEDGASEIDMVINVARLKDKDYAYVEDEIREIKKAIGNKVLK VIIETCLLTDEEKIKACELSVNAGADFVKTSTGFSTGGATVADVKLMAETVGDRARVKAS GGIHTRDEALAMIEAGASRIGASKSIEICKE >gi|229269867|gb|GG666044.1| GENE 250 288102 - 289214 1038 370 aa, chain - ## HITS:1 COG:all1758 KEGG:ns NR:ns ## COG: all1758 COG2208 # Protein_GI_number: 17229250 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Serine phosphatase RsbU, regulator of sigma subunit # Organism: Nostoc sp. PCC 7120 # 136 363 216 463 463 84 26.0 4e-16 MDKNLLENENRNINFFILNSMDDWVRIIDERGEVAFINDALKDALKKSPKLKVYLDENID LIISNSNSIATDTTMIEEKLIDGKYYSIKSSPIYLGDTFTGTIEVYRDITSESILKIDLY NANKAMLDDIRFVRRIQSSILPKNGTYGKINLSGIYNPADDVSGDIYDLIRIDENRTAFY IADVMGHGVKASIMTMFLKVTMSAIFDKHPDFTPSQVFLNLRKKFTRLHIDSSQYFTAWL GIFDFRDNSLAFSNAGHNCPPLIFSKEKNEAEYLLVTGRMISNIIEPDEYIEKKLNLHPG DKILFYTDGAIEAKNEEGNEFGLERLKDTFSESCNLAYVHEKVTSYNWQAMDDDLTLALI EYEKKEENEA >gi|229269867|gb|GG666044.1| GENE 251 289333 - 291414 2355 693 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485495|ref|ZP_03915811.1| ## NR: gi|227485495|ref|ZP_03915811.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 693 1 693 693 714 100.0 0 MKKRIIFTSLVMASVLPFLGGIETVRADEVKNLDEKAKSDLDQAKESLKTAQDEKAKLEE DLGQAKKDGEEKAEEKEALNNKLKKAEDNIKENQKILDKEGELKKVDKEIESLGQKMKAA ENEADLAKEKYDQAKKAFENAQNKSEDKKFVKEDEGEALKKQYEVADDLLTQNKKTEAQL QNGLKEKIEKQNELTNKKDGIKDFFDSYEKDKSNAEKIKSQDYQDFKKNQEKTYEKIDNE LKNLKGEVDGYNNSLKNIGDNIKNEQKVRDEKFKAYEKHKQALNIQKDYEEKNIGNLDDF AEQKRAEIEEAAKKLGEAKKKTEEGLADYQHLLLQETEKKRVIAKAKAAAKFLEEKLTEK TDAFVRANEDFIAKEKATYDDIAKEAENLLKLVQDDLGKKAAELDKLYKEQSNEQEDYEK KQNSLEIARELKQFIENKKSSNQEDKVKKELENKMNEAKDFLDKKLAIIEDLAEKDKELK AKKDKLGDIDLADLEKAKAQIEKDKQEIEKINEQIKELDESAELSKVKKIEDEIRKLEQR IKEIKGKIQDLENPKVSKQTNNYTHGEDTDRSEESVIDLLRTEFDRIYDNINQKNSYEEF KTALIRSNKTLSIARVYLEKLSSLKLEKIGANSYQKLQFEINRIKKIIALAEFLQKNHNM GEKEKFELVKLIKELKTNISLIEKNLNELGSNL >gi|229269867|gb|GG666044.1| GENE 252 291679 - 292020 572 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485497|ref|ZP_03915813.1| ribosomal protein L17 [Anaerococcus lactolyticus ATCC 51172] # 1 113 1 113 113 224 100 4e-57 MAGKRKLGRRTDHRNAMLRNLVGSLLEHGRIETTLTRAKETQKMADKMITLGKRNTLHTR RQAASYLYEPKLVQKLFSEIAPEYEDRNGGYTRVLKLGPRRGDGSERAIIELV >gi|229269867|gb|GG666044.1| GENE 253 292029 - 292979 1315 316 aa, chain - ## HITS:1 COG:lin2755 KEGG:ns NR:ns ## COG: lin2755 COG0202 # Protein_GI_number: 16801816 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Listeria innocua # 1 316 1 313 314 289 50.0 6e-78 MIDKIETNIEILDINEEDHYGKFALYPLERGYGTTIGNSMRRVLLSSLPGSSVSKILIDG VLHEFSIIDGVVEDVPEIILNIKGLNVKKHSDEDVTLFLEIEGPKIVTAKDIKEDALVEI ANPDHYIATVNDKSKLLIAMDVTNGNGYRISDDNKDDKDPIGTIAIDSSFTPVEKVNYTV ENTRVGESTDFDKLIIEVWTNGTVTPQEALAEGLSILMNKFAFFKELPDKKFPPEEIETT EELAADDVNEDLERTIEELDLSLRSFNCLKRAGFNTVADIIKVPEAELKIIKNFGKKSLT EVIDKIHDLGFTLKDE >gi|229269867|gb|GG666044.1| GENE 254 293012 - 293605 993 197 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485499|ref|ZP_03915815.1| ribosomal protein S4 [Anaerococcus lactolyticus ATCC 51172] # 1 197 1 197 197 387 100 1e-106 MAVSKDPVYKRARALGISPAYLGYAGSSNRALPKRRSKLSEYGMQQREKQKAKFIYGVSE KQFRGYYDKASRMKGQTGEQLIILCERRLDNVAFRSGLARTRREARQIVTHGHLLVNGKQ VDIPSYLIEEGDVIEVREKSKSSTLFKTIKEVNAAFGVVEWLNSDIENLKVKVEKFPTRE EIDIPVEERMIVEFYSK >gi|229269867|gb|GG666044.1| GENE 255 293618 - 294016 671 132 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485500|ref|ZP_03915816.1| ribosomal protein S11 [Anaerococcus lactolyticus ATCC 51172] # 1 132 1 132 132 263 100 1e-68 MAPKGKKSTKGRRRVKKNVERGQAHISSTFNNTMVTLTDMQGNALSWASAGQLGFRGSRK STPFAAGEAAETAAKIAIDQGLKTVEVYVKGPGSGREAAIRSLQAAGLEVTMIKDVTPIP HNGCRPPKRRRV >gi|229269867|gb|GG666044.1| GENE 256 294020 - 294364 588 114 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485501|ref|ZP_03915817.1| ribosomal protein S13 [Anaerococcus lactolyticus ATCC 51172] # 1 114 1 114 114 231 100 5e-59 MPRIAGIDLPREKRAEIGLTYIYGVGRATANEILKNTGINPDTKMKDLTEDELGKIREQL DHYTIEGDLRRETSLNIKALRENGSYRGLRHKNGLPVRGQNTKNNARTRKSRKG >gi|229269867|gb|GG666044.1| GENE 257 294374 - 294487 198 37 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485502|ref|ZP_03915818.1| ribosomal protein L36 [Anaerococcus lactolyticus ATCC 51172] # 1 37 1 37 37 80 100 9e-14 MKVRASVKKMCDKCKIIKRNGKVMVICENPKHKQRQG >gi|229269867|gb|GG666044.1| GENE 258 294566 - 294784 242 72 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 97 63 7e-19 MSKKDAIEVTGEVVEAMPNAIFMVRLDNGHEVQAHISGKLRMNSIRILEGDTVTVELSPY DLSQGRITWRKK >gi|229269867|gb|GG666044.1| GENE 259 294909 - 295559 756 216 aa, chain - ## HITS:1 COG:CAC3112 KEGG:ns NR:ns ## COG: CAC3112 COG0563 # Protein_GI_number: 15896362 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Clostridium acetobutylicum # 1 216 1 214 215 203 50.0 2e-52 MNIILLGPPGAGKGTLSSKIIDRLGAVQIATGDIFRYNISNKTELGMKAKSYMDRGDLVP DELTIDLVWDAFDKVEDREERIVLFDGFPRNLDQAKALDKGMAERNTEVGKVVYFDVADN ILIERITGRRVCPDCGATYHITNSKPSKEGVCDKCGGELIQRNDDNEETVKNRISVYNDF TSPLIDYYKKAGKLIKIDGAKTPEEVFNEFNDKLGK >gi|229269867|gb|GG666044.1| GENE 260 295563 - 296837 861 424 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 10 424 19 439 447 336 40 1e-90 MLDIIKRAAKEEEIRKKFYFTLMMLVIYRLGNNIPIPFIDTKALANAYSNIEGTLVDYLN MLTGGGLSTLSIFALGVQPYITASIVMQLLTVVIPRLEELTREGEQGRKTIQKYTRYVTI ALAIFQAIAITNGLYGAALSSATGFQKIVMNVVLIGGTMFVTWMGETMTEKGLGNGTSLL IFMGIIASFPRTISRWKEGLHYNTTSVLAIAIMVILIVFIVIAVVLISEGERRIPIQYAK RVVGRKMYGGQSTHIPVKVNMGNVMPIIFASAVLAIPSTVSLFFGGGGQSGLTAFFNKTA FGFAVYLTIQSALILIFAYFYNQIQFNTVEYAKQLQQNGGFVPGIRPGKPTSDFLATVST RITFIGSICLALLTIVPAIASRLLGLEISFGGSSVIIVVGVIIETVKQIEAMMTMKQYKG FLNR >gi|229269867|gb|GG666044.1| GENE 261 296853 - 297332 814 159 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485506|ref|ZP_03915822.1| ribosomal protein L15 [Anaerococcus lactolyticus ATCC 51172] # 1 159 1 159 159 318 100 3e-85 MKLHDLQPNVKLKDKKRKGRGAGSGLGKRSGRGQDGQNSRSGGGVRPGFEGGQMPLFRLL PKRGFKNINRKIYETINVESLNVFEDGTEVTPELLFETKLLNKNKAKAGVKILGDGELEK KLTIKAHKFTKSAVEKIEKAGGSVETIEVKKWVKPSKKA >gi|229269867|gb|GG666044.1| GENE 262 297341 - 297526 301 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485507|ref|ZP_03915823.1| ribosomal protein L30 [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 120 100 1e-25 MMEKIQITLKRSFIGKKDGQIATAKALGLRKIGQSVVKENNDATKGMVHKIRHMVEVKKI D >gi|229269867|gb|GG666044.1| GENE 263 297534 - 298043 849 169 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485508|ref|ZP_03915824.1| ribosomal protein S5 [Anaerococcus lactolyticus ATCC 51172] # 1 169 1 169 169 331 100 3e-89 MKYLLKSEVEKLNLEDRVVSINRVAKTVKGGRNIRFTALVVVGNSNGVVGVGTGKATEVP EAIRKATENAKKHMIQVPLVGTTIPHRIQGAEGAGRVLLMPAVEGTGIIAGGPVRAICEL AGYKDIKAKNLGTSNPRNIINACINAFYNMKTVEEVARLRGISVEEFDY >gi|229269867|gb|GG666044.1| GENE 264 298056 - 298415 588 119 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485509|ref|ZP_03915825.1| ribosomal protein L18 [Anaerococcus lactolyticus ATCC 51172] # 1 119 1 119 119 231 100 5e-59 MAKKNKNDRLITRKKRVRAKISGTPQRPRLSVYKSNTNIYAQLIDDVNGVTLASANSLQK DVAESEHANVETAKKVGAAIGKRALEAGIKEVVFDRNGYLYHGKVKALAEAAREAGLKF >gi|229269867|gb|GG666044.1| GENE 265 298425 - 298964 923 179 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485510|ref|ZP_03915826.1| ribosomal protein L6 [Anaerococcus lactolyticus ATCC 51172] # 1 179 1 179 179 360 100 7e-98 MSRIGKQPIVIPSGVEVTINGLNITVKGKLGEDSLTISDRVKLEQIENELHLTIPENYTK QENIDHGLYRSLLHNMVVGVSEGYAKTLQIEGTGYRAAKQGNNLVLNLGYSHQITMPDPE GIETEVPNDRTIIVKGFNKQLVGQHAANIRAKRKPEPYKGKGVRYADEHVRRKVGKTGK >gi|229269867|gb|GG666044.1| GENE 266 298975 - 299370 665 131 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485511|ref|ZP_03915827.1| ribosomal protein S8 [Anaerococcus lactolyticus ATCC 51172] # 1 131 1 131 131 260 100 6e-68 MMTDPIADMLTRIRNGNKANHKKITLPSSNEKKAIAQILLDEGFITGFNVEEDNKQGILT IDLKYTENGERVISGLRRISKPGLRVYVKANEVPKVLDGLGTAIISTSKGLMTDRAARKE NVGGEVICYVW >gi|229269867|gb|GG666044.1| GENE 267 299390 - 299575 333 61 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485512|ref|ZP_03915828.1| ribosomal protein S14 [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 132 100 2e-29 MAKKSLIAKQQRKQRFSTREYTRCKLCGRPHGYLRKYGICRICFRELANNGQIPGVRKAS W >gi|229269867|gb|GG666044.1| GENE 268 299587 - 300144 931 185 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485513|ref|ZP_03915829.1| ribosomal protein L5 [Anaerococcus lactolyticus ATCC 51172] # 1 185 1 185 185 363 99 9e-99 MIGDTMTQRLKEKYQNEVVGKLIEQFGYKNVMQVPRLDKIVINIGLGEAKDNQNLLNTAK RELSLITGQQPIEIKAKKSVANFKLRAGQAVGTKVTLRRDKMYDFLDKLISISLPRVRDF RGINSNSFDGRGNYSLGIKEQLIFPEIKYDDVDFIHGMDITIVTTAKTDEEAKAFLDLMG MPFKK >gi|229269867|gb|GG666044.1| GENE 269 300145 - 300453 521 102 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485514|ref|ZP_03915830.1| ribosomal protein L24 [Anaerococcus lactolyticus ATCC 51172] # 1 102 1 102 102 205 100 3e-51 MHIKKGDKVQIISGEYKGHVGEVLKAFPKTNRVIVEGANVQIKHQKATTMGGESGRLEQN GPIDASNVLLYSEELKKGVRTGIVYENGKKVRKSKKTDEKFD >gi|229269867|gb|GG666044.1| GENE 270 300463 - 300831 599 122 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485515|ref|ZP_03915831.1| ribosomal protein L14 [Anaerococcus lactolyticus ATCC 51172] # 1 122 1 122 122 235 100 3e-60 MIQQETRMRVADNSGARELLVIKVLGGTRRRYANIGDVVVCSVKSATPGGAVKKGQVVKA VIVRTKRGLKRLDGSVIRFDDNAAVIIKDDQTPVGTRIFGPVTRELRSEGFMRIISLAPE VL >gi|229269867|gb|GG666044.1| GENE 271 300849 - 301109 429 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485516|ref|ZP_03915832.1| ribosomal protein S17 [Anaerococcus lactolyticus ATCC 51172] # 1 86 1 86 86 169 100 1e-40 MERNRRNVRQGVVVSDAMDKTITVLCEDIISHPVYKKKIVRSKKYKAHDEKNEAKVGDKV VIMETRALSKTKRWRLVRISQAAEIV >gi|229269867|gb|GG666044.1| GENE 272 301115 - 301321 333 68 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485517|ref|ZP_03915833.1| ribosomal protein L29 [Anaerococcus lactolyticus ATCC 51172] # 1 68 1 68 68 132 100 2e-29 MKIAEIRNLSDKDLDKQLFDLQNELFNLRFRLATGQLENPAAIGTVKKDIARVKTIQTER KIEAGKEA >gi|229269867|gb|GG666044.1| GENE 273 301324 - 301752 735 142 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485518|ref|ZP_03915834.1| ribosomal protein L16 [Anaerococcus lactolyticus ATCC 51172] # 1 142 1 142 142 287 100 5e-76 MLMPKRVKYRRQHRGRMKGNANRGNQLAYGEFGLQALEACWMTANQIEAARRAMTRYIKR GGNIWIKVFPDKPVSKKPAEVRMGSGKGAPEYWVAVIKPGRVLFEMSGVSEEVAKEAMRL AAQKLPIKTKFIQRLEVTGSEE >gi|229269867|gb|GG666044.1| GENE 274 301780 - 302514 1252 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485519|ref|ZP_03915835.1| ribosomal protein S3 [Anaerococcus lactolyticus ATCC 51172] # 1 244 1 244 244 486 100 1e-136 MGQKVNPKGYRVGVIKDWDSKWFADKKDFSDLLVEDVKIREFIKKYAFEAGIADIEIERA VNNLKVTVFTGKPGMVIGRGGAGVEELKAKIERLAPGKRVIINVEEIKYQDLSAQLVAEN IANQLENRIAFRRAMKQSIQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAEREPKLAPVQNNRRKKRNNRRPNRNN KGQN >gi|229269867|gb|GG666044.1| GENE 275 302522 - 302863 563 113 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485520|ref|ZP_03915836.1| ribosomal protein L22 [Anaerococcus lactolyticus ATCC 51172] # 1 113 1 113 113 221 100 4e-56 MKVQAIAKYQRISPLKVNYIAREIRGKQVDEALNILKFTNKKGARLLEEVLKSAIANAEN NNGLDRENLYVEKAYANDAPTMKRYRPKAKGAAYPILKRSSHIGVELADIEER >gi|229269867|gb|GG666044.1| GENE 276 302873 - 303160 501 95 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485521|ref|ZP_03915837.1| ribosomal protein S19 [Anaerococcus lactolyticus ATCC 51172] # 1 95 1 95 95 197 100 6e-49 MARSLKKGPFVDDHLMKKIDELNEKNEKKVIRTWSRRSTIFPEFVEHTIAVHDGRKHVPI YITEDMVGHKLGEFVPTRTFRGHAKKATEMKSKMR >gi|229269867|gb|GG666044.1| GENE 277 303170 - 304003 1433 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485522|ref|ZP_03915838.1| ribosomal protein L2 [Anaerococcus lactolyticus ATCC 51172] # 1 277 1 277 277 556 100 1e-157 MAIRKLKPTSNGHRNMSVSTFEEVTTAKPYKALTTDLKSKAGRNNTGRTTVRFRGGGVKR RYRIIDFKRDKDNIPARVQTIEYDPNRSAYIALVAYADGEKRYILAPKGLKVGDVIESGE HADIKPGNTLELKDIPVGTTVHAIELKAKRGAILVRSAGVGAQLMAKEGGFATLRLPSGE MRMVHLNCKATVGIVGNSEHELLRVGKAGKSRYKGRRPHVRGSVMNPVDHPHGGGEGRTP IGRPAPMTPWGKKAIGVKTRNKKKQSSAYIVRRRNEK >gi|229269867|gb|GG666044.1| GENE 278 304015 - 304308 500 97 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485523|ref|ZP_03915839.1| ribosomal protein L23 [Anaerococcus lactolyticus ATCC 51172] # 1 97 1 97 97 197 100 8e-49 MKAPYQIIKRPIITEKSMEMLDEHKYTFEVDKNANKPEIKKAVEAIFEGVKVKSVRTMNY KGKKVRTRYGYGKRADWKKAIVELTEDSQAIEYFDGL >gi|229269867|gb|GG666044.1| GENE 279 304308 - 304931 1026 207 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485524|ref|ZP_03915840.1| ribosomal protein L4 [Anaerococcus lactolyticus ATCC 51172] # 1 207 1 207 207 399 100 1e-110 MPKVNILNIKGENVGELELNETIFATKVSEHAVYEVIKNQLANKRQGTQSAKTRAEVRGG GRKPFRQKGTGRARQGSIRAPHYTGGGVVFAPKPRDYSYRLAKKLRRKALYSVLTSKLND NELIVVDSLALENAKTKEAKAALVALNADRKAYVVTAEKDELVYRSFRNIEGVEVAEARL INVYDLVRHDKLVITKDAIAKLQEVFI >gi|229269867|gb|GG666044.1| GENE 280 304942 - 305577 1069 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172] # 1 211 1 211 211 416 100 1e-115 MKSIFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNV KKPIRGHYDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQ GAIKRWNYGRGPASHGSKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKV NAEDSYILVKGGVPGPKGGLVEVKQAVKSLA >gi|229269867|gb|GG666044.1| GENE 281 305657 - 305968 510 103 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227485526|ref|ZP_03915842.1| ribosomal protein S10 [Anaerococcus lactolyticus ATCC 51172] # 1 103 1 103 103 201 100 6e-50 MANQQKIRIRLRAYDHEVIDSSAEKIVEAVKRSGAEVSGPIPLPTEIERITILRAVHKYK DSREQFEQRTHKRLIDIIGPNAKTLDALKKLNLPAGVDIEIKL >gi|229269867|gb|GG666044.1| GENE 282 306380 - 308302 2612 640 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 116 625 1 480 484 119 27.0 2e-26 MQNKLLLLLLSASILTACQNDNARKKEEVKSEEKSKDTSEQKEKTTDIAYKEGQYKAVAQ GVDGDVEVIVKLGKDKIESVEIGEENETSGICEAVYNTIPQAIVDNQSLAIDNVSGATIT SAAVKAAAAKAIEEGSSKEVVDALKKTLVPVDVKDEEFNYDVVVAGGGFSGIVSAYRAAS NGAKVALIEKNGLLGGTSITASGNMLAAPTEADKETMKTGWLNRSWAQDLNPIDMEMLDA LIDVSPKLMQVYDEIGVDYRTEPSEKDGSITVKINPNVKSKKNAEAITIPSKKANAKGAP SLIATFVKKLEDLGVDIYLNTPATELINDDEIIIGVISDSKTGKKTFHAGAVVLATGDYA RNRDMDKEYNKRGAGEYSASAIGNTGDGHKLALKAGGVMNPFQESMSGVFNANPHDYPMV GDPTNGYPFEAILLNMEGKRVFKEDGGSHPQKFKFVREDGLNTAWAIMDKEIAPNLPHLE EYLEKTANKDKIIRVYRADTIEELAKFMELDPEVVKKEVDRYNELARAGEDTDFGKDPKF LKEFKAEGPYYAALMYDATRGVYGGIKTSPRAEVVDKDGHAIPGLYASGIISSGQFFGDF YPGRQAIGVAGYMGYIAGENASAFADESVANDYADKNDKK >gi|229269867|gb|GG666044.1| GENE 283 308521 - 309462 1009 313 aa, chain - ## HITS:1 COG:no KEGG:Apre_1590 NR:ns ## KEGG: Apre_1590 # Name: not_defined # Def: 2-keto-3-deoxygluconate permease # Organism: A.prevotii # Pathway: not_defined # 1 308 1 308 312 206 38.0 2e-51 MLARFFKKVPAATIVVPMIFAAIIHTFAPNLFVVGPMTAAMNSKEGLNVIIDITLVAVGS QLTFKRLRLALHRGLVLFLSKWLTAVVLGYIFFKLFGREGFLGISALAFIAAISNHNNSL FIGLIGEYGDEYDMASAAITAVISVPIFTFLTLSMLGVADITPNSILDLALPIIIGIFFG NLDKSFCDFLAGTQTYMMPFLGYAIGSGINLSAIFKGGAAGVVLAVLTIASAFIITLPAD IFINKRPGWAAISIYTAAGNSVIVPFLVCDFDPSWQAYENLAAAQLGTVVIVSSLLVPFV ASLWLKIRKSRKF >gi|229269867|gb|GG666044.1| GENE 284 309682 - 311373 2033 563 aa, chain - ## HITS:1 COG:no KEGG:M6_Spy1173 NR:ns ## KEGG: M6_Spy1173 # Name: not_defined # Def: LPXTG anchored putative adhesin # Organism: S.pyogenes_MGAS10394 # Pathway: not_defined # 31 453 146 567 1123 72 24.0 4e-11 MKKNNIACLGLAMALSTSLLVSHMEISRADERGKATQKVETKDKKTEIEKLEKELATEKE NLRKKEANYTKEKGLLDRYKKDKDKAEKDLKAYKELEKTIDEDISKIGSKEKLEKEYSEL DDRLRKEEDQKLTLKKALEVAKSDQEKNASALKELTKGIKNYNPNLKTDLDKKEEEYKAL EKSIGEHDKKISQIEEKIKTSRDQLNAAESNEKSTSNSIDDKRAELEGVRAQIKYLAEKF TLTRKAQQSYEESLKSGEKADPKILDRFNNMIAEIEREKAANIEKENRLDNEIKDLEAKK AREAKQKEFINQELTNLDKEKNSEDAARTQKKIQAGQLQKDKEELEEKIRKQKIAPQVMD KINELEGKLEQNKKQVANGQKLLAESEDNIKDVKNKISANKENAKKLEELTGKKADLQKK IDQAQKDIKSNQGAIDEKKSIVENLKKDLEAQKLKTTEIQTKLYRAKGIVIPRRKDRDAE KSSEGKNKKIDEAKKKEIKKHINRLKEAVAENKISVKAGEFLLEKAPKQIAPVKDKLTML VNNAKGIIEKSEKVLTKLEGLVD >gi|229269867|gb|GG666044.1| GENE 285 311572 - 312288 839 238 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485530|ref|ZP_03915846.1| ## NR: gi|227485530|ref|ZP_03915846.1| hypothetical protein HMPREF0072_0933 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0933 [Anaerococcus lactolyticus ATCC 51172] # 1 233 24 256 261 378 100.0 1e-103 MILLACSRQGDNAKVLKSEVARPKAKSGQVSDFLVGKVLKDSFDDPHSYSSLNFYEDGEF DGDFLSNSDIDGKDFGLKGISEKTYNRSEIHKSVFSGKFKVGESISKGVYKLKLEDFSIN NEKGPDKEIKYQSWVDFARGLSEDDEYILYLKGALLDDYLLGNNQFKKDQIENSEEDDHH HEEGDHDNEDIHHDHEDDDDDHDEKYRAYGLIIYNKTQGIIFTEHDKWAMSNHHHHHH >gi|229269867|gb|GG666044.1| GENE 286 312611 - 313555 1110 314 aa, chain - ## HITS:1 COG:CAC0395 KEGG:ns NR:ns ## COG: CAC0395 COG0524 # Protein_GI_number: 15893686 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Clostridium acetobutylicum # 1 312 1 315 315 301 49.0 1e-81 MAKVILFGEPMALLIADTVGPLEDVEHFTRAMSGAEVNVAIGLTRLGHDVEYLTKLGDDP FGHYIEKTLKKNQIGTSFISYDSVFRTGIQLKNRVTDGSDPHAPYYRKGSAASHMSKEDI DKIDLEGVDLIHITGIPPAISLSARQATFRLAERAKVNNIFLTFDPNLRPALWEDKETMV EVLNEIAKYADLILPGNEEGKILAKTSDNDEISDFYHKLGVKTVVVKNGSDGAYYNDGKK SEQVLGFKVEKVVDTVGAGDGFAVGVLSGIIEGKNMFESVERGNAIGAIQVTHISDNEGL PTHEELEAFIKKAR >gi|229269867|gb|GG666044.1| GENE 287 313576 - 314538 772 320 aa, chain - ## HITS:1 COG:PA3181 KEGG:ns NR:ns ## COG: PA3181 COG0800 # Protein_GI_number: 15598377 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Pseudomonas aeruginosa # 9 204 17 211 220 83 25.0 4e-16 MKNIEKLYENGLLPIVNIDDECEALKIAEAIMDGGLGCLAIRFQNEQSFESVAKIKEKYP NLTVGIVGIFDKEQVHKAKKYNSDFIMLSSLDDNLLNSAIDEEIDVYPLCCDESDISKLK EYGLKTLIINLEGKSNKKTYIDSLRYLFSDVKFIVIDENPKDNLSFYSKCKDVLAVSGTW VVPNDYVKNKQYKEISERIDKNLLSMCDFRLAHVGINCENLEQSKKVANSFEKIFGFEQN ENPGSIFNASYIEVLKMPFLGKKGHIAISTNSVDRAKAYLERKGISFNADTLNYTSEGIL QTVYTKDEIGEFAVHLVRRK >gi|229269867|gb|GG666044.1| GENE 288 314544 - 315494 882 316 aa, chain - ## HITS:1 COG:YPO1288 KEGG:ns NR:ns ## COG: YPO1288 COG0111 # Protein_GI_number: 16121571 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Yersinia pestis # 1 312 6 320 321 190 31.0 4e-48 MKVYITDCDRDNINIEKEVLKKAGIDLILKKAVSEDEVIEQCKDGEIFIVQYAKITRKVM ENCPDLKCIVRYGVGVDTVDVEAATELGIQVGNVPDYGMNEVADHAISLALCFLRKINIM NNFTKNDKWDYTEAIPIHRFSTLTAGVVGLGRIGSNFAKKMSALGFKVIGYDQYKKNIKE LDFVKMVDFEGLLKESDFISIHCPADNNIDLFDKDAFSKMKKTSFIINTARGGIINEEAL EWALSNEIIAGACLDCMTNEPVDKSNLLFKYENVIVSPHIAWYSEESAQELKRKVAEEAV RFAKGEDIHYPINKIR >gi|229269867|gb|GG666044.1| GENE 289 315954 - 317444 1298 496 aa, chain - ## HITS:1 COG:BH2009 KEGG:ns NR:ns ## COG: BH2009 COG3333 # Protein_GI_number: 15614572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 17 468 18 466 504 381 48.0 1e-105 MQLIDGFINIFQNPLLILIIFLGVGAGMVIGALPGLTATMGVALFLPITFGMDAITGLLL LIGIYFGSIYGGSISAILLNTPGTPASAATAFDGNKLVKQGKAGHALTTAAVASGVGGLI SVVMLAFISPQLAKIALDFSSPERFGLALFGISIIASISGDTPLKGLIAGIFGLLISTIG MDSITSFPRFTFGFVSLLNGLSFIPIMIGLFAVSEAIVIFEEEIRNIHGKKAENEKVKFP SLKEIFTLFPTMIRSGIIGTFIGIIPGAGADIASFVSYNVGQRLRKKDEVKFGEGNPKGV ACSEAANNGVTGGAMVPLLTLGIPGDAVAAIMLGALIVQGIQPGPEIFTNNADIIFTLFS GMFIANVVMAILGVIGIPLFSMILNVPKVVLAPVILMLSSVGAFAINNNFFDVYTMLSFG ILGYLMKKYKFPASPIVLAMILGPMAESEMRRSLILSGGSYSIFFTRPISLVFIIIAVIS LLLPYINNYRRNKSKN >gi|229269867|gb|GG666044.1| GENE 290 317453 - 317893 330 146 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485536|ref|ZP_03915852.1| ## NR: gi|227485536|ref|ZP_03915852.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 146 1 146 146 206 100.0 6e-52 MKKANKIISIILIILSGFFYYFSTQFPESVGNEVGHAFFPKILAILLIVLSVSLFFAKEK DESKIFELSSAQIKTFVMGAISLIVYIIAINILGFVVSSVIYSIVWIYLMGNKDIRKYIV PILCSIAISLVFEKLLGVVIPHGMIY >gi|229269867|gb|GG666044.1| GENE 291 317966 - 318958 1110 330 aa, chain - ## HITS:1 COG:FN2103 KEGG:ns NR:ns ## COG: FN2103 COG3181 # Protein_GI_number: 19705393 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Fusobacterium nucleatum # 34 329 10 308 308 173 32.0 4e-43 MKKKILSFMVLAVAACISVGCANNNAKKEGNGGESADSDYPKKPIQLIVPYAAGGGTDTV ARAIGNEVQNELGQSVAVQNVTGGSGAVGFQQGINSKADGYTLTMTTVELLTLPQLGVSN FKYTDFRPIALLNKDPAAITVRADAPWDTIEDFIEYAKKNDVKVGNSGVGAIWHMAAIAF QNETGAKFVHTPYDGAAPAVTALLGGHVDAVTVSPGEVYTQVQSGDFKVLAVMSDERVKQ LPDVPTLKEKGIDLSIGTWRGICVPKETPDDICSKLEGAFIKASETDAYKSTLEKLNLGY ASMKSEEFSKFMEQQNTQFEELSKSIDINK >gi|229269867|gb|GG666044.1| GENE 292 319027 - 319782 900 251 aa, chain - ## HITS:1 COG:ECs4004 KEGG:ns NR:ns ## COG: ECs4004 COG3836 # Protein_GI_number: 15833258 # Func_class: G Carbohydrate transport and metabolism # Function: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase # Organism: Escherichia coli O157:H7 # 14 251 21 252 256 140 33.0 2e-33 MSIKEKMKNGNSVIGPFIKMPSPELMEIIALSGFDYVILDCEHGPLDMLSAQNLIRAAKL RGMDAIVRVGSNDPLSVSRALDIGADGVQIPQILNKKDAEAAVRYSKYSDMGERGVCKYV RAADYTFMEASEYFKKANDEKLVIIHIEGLEGISNIDEILDVEGIDIIFIGPYDLSASMG LIGDVRNEKVQKELSYIVKKAKAKNKMVGTFADDIESARYYRGLGIDYISYSVDVGIIAR KFKEDYQEFAN >gi|229269867|gb|GG666044.1| GENE 293 320082 - 321113 698 343 aa, chain + ## HITS:1 COG:CAC0393 KEGG:ns NR:ns ## COG: CAC0393 COG1609 # Protein_GI_number: 15893684 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 3 343 2 340 344 225 38.0 8e-59 MTNKTNKVTIDTVAKQADVSKSTVSRYLNGKSNVISEDKRNRIKSAIEELNYKPNKLAQG LKSKTSGVIGCIVSNIGSPFSSILVKGINQECLKQGYQLILTDSEDNKENEKKAINNLIE RSVDGLIINSTGENDEFILKLSNQGFPIVLADRPLSIPGKIDTVVTDNEESIEKALLYLK KVGYTKVGLFGIAMKENEVRRIRYYSFCKYEKKIFNSGETDSVYFYNDLDDCRKKVNHFV SNNITERVAILTINGGALLDVLKVIINSTGIKIGKELGICSFDNWGWADLVGPGITTITQ NTWGVGLESARILFRKIHSDNNQEPTTKVLNNILEIRESTISL >gi|229269867|gb|GG666044.1| GENE 294 321310 - 321936 704 208 aa, chain - ## HITS:1 COG:CAC2973 KEGG:ns NR:ns ## COG: CAC2973 COG0800 # Protein_GI_number: 15896226 # Func_class: G Carbohydrate transport and metabolism # Function: 2-keto-3-deoxy-6-phosphogluconate aldolase # Organism: Clostridium acetobutylicum # 1 207 1 212 213 184 43.0 7e-47 MSKVTTISKVLELGIVPVVRAESADQAIEFCKGLIDGGINTLEVTFTIPNAIEVFQRIQK ELPEDTLLGAGTVLDSTTARLAIMNGAKFIVSPSFDKEVAKMCNIYNIPYMPGCITPAEM LEAYKYGVDIIKLFPGSLPGPSYVKAIHGPYPHFQIMPTGGVSLENLKDWFDAGVVAVGA GSNLVKGSREEITKKAKQYLEKIAEIRK >gi|229269867|gb|GG666044.1| GENE 295 322176 - 322415 346 79 aa, chain - ## HITS:1 COG:no KEGG:Apre_1606 NR:ns ## KEGG: Apre_1606 # Name: not_defined # Def: chromate transporter # Organism: A.prevotii # Pathway: not_defined # 1 78 106 183 183 78 61.0 8e-14 MADVLKFLRPAIVVMILIAGLDILKTSLFDINPIAFENLNVKMLGLFLGAFIIMQKKDYD PIKVMLASGAVYLILGAVV >gi|229269867|gb|GG666044.1| GENE 296 322579 - 322869 363 96 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 5 85 6 86 176 84 56.0 6e-17 MLIKLFISFFKIGLFSFGGGYAALALIQQEVVVENSWLAVGEFNDLITISQMTPGPIALN SATFVGQRVAGFPGSLAATIGCILPSAIIVGALSYF >gi|229269867|gb|GG666044.1| GENE 297 322859 - 323416 628 185 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 3 181 4 181 186 96 32.0 3e-20 MENKLWKIFKSTLYLSAFTFGGGYVILTLMKDTFVDKLKWIDKDQMLDMTAIAQSAPGAV AINASIVVGYEISGLPGMAVAILGTAIPPLIIISVISMFYEAFIANYYIASFLKGMQAAI AALIFKVSFDMGRDLLKEKSKIVPAIMVTAFILGYFLKVSIVYIIGSLILLGLINSLAKR RSHVN >gi|229269867|gb|GG666044.1| GENE 298 323505 - 323993 552 162 aa, chain + ## HITS:1 COG:BS_dfrA KEGG:ns NR:ns ## COG: BS_dfrA COG0262 # Protein_GI_number: 16079240 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Bacillus subtilis # 1 161 2 162 168 103 37.0 2e-22 MKLILAVDKNWAIGRDNKMLYDLKKDLNHFKEITTGGLVIMGRKTFDSIGFALPKRENII LTRDESLKRNGALVFNNVSDVINYVNKSPKEAFVIGGAEICELFLAYIDEAIITKIDSYS VADTFLHNFDEDSDFELVEESEPIDDEGKKIKFVRYKRKENK >gi|229269867|gb|GG666044.1| GENE 299 323990 - 324235 352 81 aa, chain + ## HITS:1 COG:no KEGG:Apre_1627 NR:ns ## KEGG: Apre_1627 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 81 6 81 81 72 48.0 7e-12 MKDKILFVSDLCPDCAGILQKIKEGSEKYNEYDVVNITSSMPSLKLFLKYRDTLPGYEEV RKTHRAGVPSVVIGESDVEFL >gi|229269867|gb|GG666044.1| GENE 300 324286 - 324963 683 225 aa, chain - ## HITS:1 COG:STM4109 KEGG:ns NR:ns ## COG: STM4109 COG0176 # Protein_GI_number: 16767375 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Salmonella typhimurium LT2 # 1 211 1 211 220 144 38.0 1e-34 MKLIIDDANIENIRKIYDYYPVSGVTTNPSILAKAGGNPLEHLIKIRQVIGEDELHVQVL EDSAERIIKEAEFLNKKLGANTYVKIPVNPEGLKAIKILSKKGFKITATAIYSINQAYLA AQAGANYLAPYINRIDNLGYDGINIAKNIQKILIENKYETEILAASFKNSNQLIRLAEIG IGASTCSSDVIFKLIDDKNIDSAISAFKNDFSKLDSSKKTWLDYI >gi|229269867|gb|GG666044.1| GENE 301 324976 - 325596 682 206 aa, chain - ## HITS:1 COG:BH2502 KEGG:ns NR:ns ## COG: BH2502 COG0036 # Protein_GI_number: 15615065 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Bacillus halodurans # 1 195 9 204 216 148 41.0 8e-36 MCANFDNLKKEVVSLDKAGADIFHIDIMDGNFVPNFGMGLQDIDTVRRNTNKEIDVHLMS INASDHIGLFKKAGVDIVYVHSEGDSLISTTLAKIKENGMKVGLAVSPGTSIYSIKELLN LVDIVLVMTVNPGFAGQKYLDYVDEKIFKLADLKSKYNFEIFVDGAISEEKVNYLKTKGV DGFILGTSALFGKDESYEEIIKRLKS >gi|229269867|gb|GG666044.1| GENE 302 325636 - 326544 916 302 aa, chain - ## HITS:1 COG:BS_ydhS KEGG:ns NR:ns ## COG: BS_ydhS COG1482 # Protein_GI_number: 16077654 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Bacillus subtilis # 2 243 5 256 315 155 36.0 8e-38 MIILNTVSNEKVWGTSRLHDYFGDPGIEKIGSVYTVSGIKEISCEIIYGDENKDLYSAVK ANPEKFGLANGVDFPLIISFTSADKDLSIQVHPTDDYAKEHEKKMIGKSEAWYFIEKPNK GWIYAETDIDDKKIIKEKILNKDYESVVNKVKVDEDDMVFVEAGTIHALTEGSLVYEIQQ SSDITYRLYDYDRLDKDGNPRQLHLEDGINTIVSSNKVSIKNFENDCELKYKPFDLLRTK ISGEYINNNNVAQAITITNGSAVIDGHDLIQGQSVLILPGESVNIDKPADEVVIATPNLY FL >gi|229269867|gb|GG666044.1| GENE 303 326604 - 327428 987 274 aa, chain - ## HITS:1 COG:CAC1460 KEGG:ns NR:ns ## COG: CAC1460 COG3716 # Protein_GI_number: 15894739 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Clostridium acetobutylicum # 7 274 3 271 277 184 40.0 2e-46 MTNTNNKEKLTPNERRQIWKRWGCSHLASMSYEKLQGHAWAYTFTPFAKKYYSDDPEAAK RLMERHSMFYNTEPQTGQLVTGIVTSLEEQIALGEDISEDMPVNIKTTLMGPLAGIGDSI IQGIIVPTLLSIGMGLAASGSALGPLFYIISYAIIGTFITYISFNYGYKLGVNAIDTIVG ENAQRITSAFNVIGVIVVGALAAANINLTTKIEIPMGTEVQQLQALLDGIFPKLLPFAVV MLSYWLLKHKKVSATKVILIQVALVSVGVVLGVF >gi|229269867|gb|GG666044.1| GENE 304 327444 - 328268 789 274 aa, chain - ## HITS:1 COG:CAC1459 KEGG:ns NR:ns ## COG: CAC1459 COG3715 # Protein_GI_number: 15894738 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Clostridium acetobutylicum # 5 224 5 233 281 95 31.0 1e-19 MDNLFLPALIAGIFCFLGAIETPFAFGMTGGFYILGRPLVAGLIMGLAFGDVKAGVLCGV AVQGVFIANLSTGGTTNSEITYAGYGGIGLAMATGGNPAVAVTLSILIGQTFGLIFYNTG RAGYSFWNTRAQKAAEELDYNGIRFNHIIGPAITTFLLRAVPVFLAVYFGQPIVDWLLHS IPEKVTDIITILGGVLPALGIAMLMNIVIKQKVHFIFFLVGFALTTFAGLPMIPVVILSA LIAYIVYLASGNKTVVQAASVAEDSDFYEDDDLF >gi|229269867|gb|GG666044.1| GENE 305 328330 - 328824 646 164 aa, chain - ## HITS:1 COG:ECs5001 KEGG:ns NR:ns ## COG: ECs5001 COG3444 # Protein_GI_number: 15834255 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli O157:H7 # 1 148 1 148 164 88 33.0 5e-18 MTITLARVDDRVIHGQTMTRWAASRKLDAFVIASDKVAGDELRKKVLKSAANPHKLGIYD NKTSVEKIKMASESNKDFFVISDSPQNFAEILKMGGDFGKVLNIGPMNTRPGAKVLGKTT AIDQADYDAFEYMHNHDIELQFQIIPEDSIRTWEQIKKLYDAAE >gi|229269867|gb|GG666044.1| GENE 306 328842 - 329267 553 141 aa, chain - ## HITS:1 COG:SPy1738_1 KEGG:ns NR:ns ## COG: SPy1738_1 COG2893 # Protein_GI_number: 15675587 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pyogenes M1 GAS # 3 124 5 130 169 75 34.0 2e-14 MKLLLVSHGNFCHGIKESYEMIAGKNDNIISISLGDDGIGVFSEKLRSKLTELIENDEVL VLSDIQGGTPYNEAYRFKLENPDKVEILTGMNLPMLIECGTSLDIGSSIEELVNIGLNVG KDSIVKCEIDDSDDDDDDLEF >gi|229269867|gb|GG666044.1| GENE 307 329429 - 330136 877 235 aa, chain + ## HITS:1 COG:SA0133 KEGG:ns NR:ns ## COG: SA0133 COG0274 # Protein_GI_number: 15925842 # Func_class: F Nucleotide transport and metabolism # Function: Deoxyribose-phosphate aldolase # Organism: Staphylococcus aureus N315 # 9 224 2 215 220 186 48.0 3e-47 MTKQYTLKELRRFVDHTNLHADASREDMKKLCQEAMDYNFKMVAINSVQSKACAEFLKDS DVHVGAAIGFPLGQQTIATKVFETEDAIKNGADEIDYVINLTEVVDGNFDYIKDEMEQIV KICRDNDVISKVIFENCYLNKDQIRKLAEISKEVKPDFIKTSTGFGPSGATVEDVKLMKE VVGDTVKVKAAGGIRDVDTFIAMIKNGAERIGTSSGIKISEELEKLVSDQGTIEI >gi|229269867|gb|GG666044.1| GENE 308 330222 - 330854 344 210 aa, chain + ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 2 203 34 235 243 110 32.0 2e-24 MIPKETDLALEYGVSRPTVRQAIQSLVDEGYLDRVKGKGTFVKNNKITQDFTNIIKSFDD DMKAKGIRPKTKLISSDLVECPERVANALHLKSKSKVIKICRLRYADSIPAVLVNTYLPY DGLEDLMGIDYSSVSLYTCLDQLGYKINKVSRILEMKISDELSASLLNIACGDPLFFFKT IGYHNDLPLEYSEAWYNGNVNSFKFDITIS >gi|229269867|gb|GG666044.1| GENE 309 331142 - 331756 631 204 aa, chain - ## HITS:1 COG:SP0725 KEGG:ns NR:ns ## COG: SP0725 COG0352 # Protein_GI_number: 15900622 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 204 7 209 210 166 44.0 2e-41 MKKLYLVTNSDKYSEEEFLERVEAALKGGVDILQLREKDKSDLEILNLGKKVKALCDSYK VPMLIDDKPHIAWALGLGVHLGADDMPIALGRKLLGEKALIGATAKSVEAAQKAEKEGAD YLGVGAIFETKTHVKTKRTSVETLKEIKKNVGIEVYAIGGLNIDNVDILKGTEVDGICVV RAIMDSPNVEEDTRKLKEKINKIL >gi|229269867|gb|GG666044.1| GENE 310 331753 - 332574 1093 273 aa, chain - ## HITS:1 COG:PAB2432 KEGG:ns NR:ns ## COG: PAB2432 COG2145 # Protein_GI_number: 14521296 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pyrococcus abyssi # 1 271 1 266 268 159 37.0 5e-39 MINLEEIIEARDRLREKSPLVHAITHPIAINMVANVILFMGAKAICAAHPEEVAEIVGMS DCLSVSLGNITSERMVAIDEACHAANGKNIPLTIDMVGVGASTLRYKFANKLLSKYKFDL IKGNASEIRALASGASNAKGIDVGKADELKGANIEKISMKACELAKKYHTIVLVTGKTDL VVGENSYFTIDNGVENLSKITGTGCMLTAMISSFMAVTDPVSAAICGLLVMEIAAEKIDT DRLYTFFVNLMDEISLISNEEISKKAKVREIKF >gi|229269867|gb|GG666044.1| GENE 311 332549 - 333088 408 179 aa, chain - ## HITS:1 COG:SP0723 KEGG:ns NR:ns ## COG: SP0723 COG4732 # Protein_GI_number: 15900620 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 2 164 3 165 174 125 42.0 3e-29 MKNRQKILILVTLSMFVSIGVVISPILRFEGFAPTAHFVNIVCSVVLGPWYSLANAIITA IIRMSLLNIPPLAITGQVFGAFLSGFLYRKSKGSILACVIGEIIGTGIIGSIASYPVMTL LWGKGDITWYFYLPSFLIATIMGGSVAYIFLKTLQRAKVLYPIQRNIGVNVYDKSRRDN >gi|229269867|gb|GG666044.1| GENE 312 333543 - 333734 275 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485559|ref|ZP_03915875.1| ## NR: gi|227485559|ref|ZP_03915875.1| hypothetical protein HMPREF0072_0962 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0962 [Anaerococcus lactolyticus ATCC 51172] # 1 63 1 63 63 104 100.0 2e-21 MRKNNLDKLEFYTSFASAGLVYILAFLQYRKGKDSWWLILIAAILMTANAYVKYRKLEKS KNN >gi|229269867|gb|GG666044.1| GENE 313 333721 - 334152 627 143 aa, chain - ## HITS:1 COG:CAC3292 KEGG:ns NR:ns ## COG: CAC3292 COG0822 # Protein_GI_number: 15896537 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Clostridium acetobutylicum # 1 143 1 143 143 159 55.0 1e-39 MDMQEIYSQIILDHSRNQANKHDLEDPDIKEDGHNPSCGDEIVLQLKLDGDKIVDAAFTG DGCAISQAATSVMCDMLVGKTMAEADKMADIYQRMIKREDVTDEELEELEDAVAFKNIQN MPQRVNCALLSWNTLRAVIDEKK >gi|229269867|gb|GG666044.1| GENE 314 334152 - 335372 1531 406 aa, chain - ## HITS:1 COG:CAC3291 KEGG:ns NR:ns ## COG: CAC3291 COG0520 # Protein_GI_number: 15896536 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Clostridium acetobutylicum # 8 405 7 405 408 431 54.0 1e-120 MNIEEIRKDFPYLDGAKVGKDVIYLDTAATSQKPRQVIEAVDTYYKYKNANPHRGAHFLS WVATEAYENGREVIKKFINAKSRNEIVYTKTATEAMNLLAYSYGLDNLKAGDEILITILE HHANLVPWQMVAKATGAKLVFAYLNDDHSLDYEDLKAKINSKTKIVSVTGASNVTGEITD LKRIIGWAKEVGATTIVDAAQLIAHKKIDVTDLDCDFLVFSGHKIYSPMGIGVLYGKYDL LDKMKPFNLGGDMIEYVYEDYSTFAKAPLKFEAGTPNVGGVIGLIEAIKYVEEIGMDHIH AHEMELTHYAYDLIKDIENIKIIHPTSCEEGALIAFAFEDIHPHDIASILDSKNVAVRSG HHCAMPLHTYLGISSTARASFAIYNTKEEVEIFAKSLREVRKVMGL >gi|229269867|gb|GG666044.1| GENE 315 335374 - 336417 1306 347 aa, chain - ## HITS:1 COG:CAC3290 KEGG:ns NR:ns ## COG: CAC3290 COG0719 # Protein_GI_number: 15896535 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 1 340 5 359 366 157 30.0 2e-38 MAKINEMRAHTWAYLGLNNADYNLVEIKNQPFYGKSLSEEQCEVKKAFECETYGLSAEIN KENEDFRNHFLSFDIDKNRETEFINLEMNDENNILVSNIEINARTNTSSSFLVNFSDLAE GKIFINSQILVNLEKEAKVKLVVVVDLKNESTNLNSIATRLADRAELDVTYIEIGATKSM VNIRNILRGEEAKVVENGVYFKSKEEYLDILTVNKHYGINTDSNTLFNGALKDKAVKNFK GIVDLRRGCTKADGKIGDYSMMLSDEVVNKSAPVLLNEEKEVTGKHAASVGRMNKEMLFY IMSRGFSKKQAESMMLEANFAPALDKIEDETLRKKIADEVHALNSRN >gi|229269867|gb|GG666044.1| GENE 316 336417 - 337829 1524 470 aa, chain - ## HITS:1 COG:CAC3289 KEGG:ns NR:ns ## COG: CAC3289 COG0719 # Protein_GI_number: 15896534 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Clostridium acetobutylicum # 7 467 5 465 466 603 60.0 1e-172 MKEINIEEQLKDIDRGYYDFFNEFIYSDITEKGLNAKIVNEISDKKNEPEWMRKRRLKSL EIFEKTPNPSWGPDLSELNMADITTYVKPPTDKKSTWEALPEDIKDTFDRLGIPQAEQES LAGVGAQYDSEEVYHSIQKHLSDQGVIFIDFSTAVREHEDIVKKYFQKAIPPTLHKYAAL HGAVWSGGSLIYVPEGVKVDIPLQSYYRLNAPGAGQFEHTMIIAEDNSRVHFIEGCSAPR YNVVNLHAGSVEIFVGKNAEVRFSTIENWSRNMYNLNTKRSIIQEGGKMIWVSGSFGSKV SMLYPTSILAGEGARAEYTGITFAGDGQYIDNGCSMIHLAPNTFSTALTKSITAGNGKSM TRSLVAMRKNSQGSKSTVDCENLMISEESQSDTIPVLDIRNDDVDCGHEAKIGSIDQGQV FYLMSRGIPEEEAKSMIVRGFAEPISKLLPLEYAVEMNNLIDMELEGANG >gi|229269867|gb|GG666044.1| GENE 317 337831 - 338562 196 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 227 1 221 245 80 27 1e-13 MSDLLKIENLHVSAGDKDILKGINLTVGKGEVHVVMGANGSGKSTLMNTIMANPAYTVNE GKIFFEGEDITDYSVDKRARLGIFMSFQYPDEIPGVKLSDFLRISEEQITGKKPKILAFN KELTKQMENLKLDSSYANRYVNVGFSGGERKKSEILQMQMLSPKLALLDETDSGLDVDAV RIVSDGIKNFLDGEKSVILITHHREILSNIKADYVHILKDGVIQETGDDSLMDKIEACGY EWV >gi|229269867|gb|GG666044.1| GENE 318 338694 - 338960 285 88 aa, chain - ## HITS:1 COG:BH3074 KEGG:ns NR:ns ## COG: BH3074 COG1925 # Protein_GI_number: 15615636 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Bacillus halodurans # 1 87 1 87 87 67 37.0 4e-12 MYEQKVTLSNEIGLHARPASIFIRQAVQFPCDITVEKAGRSYNAKSIMSVLSMSASKGDE IIIRADGDAEEEAVNSLIDLVENKLNEF >gi|229269867|gb|GG666044.1| GENE 319 339229 - 339411 113 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485566|ref|ZP_03915882.1| ## NR: gi|227485566|ref|ZP_03915882.1| hypothetical protein HMPREF0072_0969 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0969 [Anaerococcus lactolyticus ATCC 51172] # 1 60 1 60 60 102 100.0 1e-20 MEIRKISKSDLEELAKLMVDVYKAPPWNDKWTVEIELESLNDILDFPKFFGNVIVDENKL >gi|229269867|gb|GG666044.1| GENE 320 339542 - 340048 424 168 aa, chain - ## HITS:1 COG:no KEGG:Apre_0714 NR:ns ## KEGG: Apre_0714 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 168 1 168 168 260 86.0 1e-68 MDIRRAILDGIAMVAIFNGSVAAFVLIDPRFFFDSYPKEIQNSAPEKMTKEEKRINFILT IIISGIVFIYGVTSLLHTGIKGLRDLFCMSYIQWIILNLGDFLLLDLLLFQGKYKDRIVI PGTEGHEDYKFGNWMKHLAIKEHFILMPFLIIPIVSIVQAWLVVLLGL >gi|229269867|gb|GG666044.1| GENE 321 340059 - 340364 279 101 aa, chain - ## HITS:1 COG:no KEGG:Apre_0713 NR:ns ## KEGG: Apre_0713 # Name: not_defined # Def: hydrolase or acyltransferase (alpha/beta hydrolase superfamily)-like protein # Organism: A.prevotii # Pathway: not_defined # 1 101 148 248 248 189 88.0 3e-47 MGKDNLSVIEMTYPQISKNTIKNACKFIYHYKPPKNLRKFSNPIMFWRGSEEPIPAKSEK ILRDYLPQMKTEVFEVMGHGQFLHEHPKEYAEKLKIFLENK >gi|229269867|gb|GG666044.1| GENE 322 340391 - 341017 310 208 aa, chain - ## HITS:1 COG:no KEGG:Apre_0712 NR:ns ## KEGG: Apre_0712 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 207 1 207 208 355 89.0 5e-97 MKYKGFYFLLFKGPMKKVLIEKYNKAYASEIIKKSKKVYRELVKNMDDIGEDNPMAYNEM FALVFVAPYIASEKKIPPETVQEMMRCSLYTFKWFFSLINLNTKRGKEANKKNILKYYKW YTEEKEKLYPTSFKVDFEGQPYEGACYYRITRCPICAYTKKLSVDELMPLFCELDELMIS FQHGVLHRKETIAKGGDYCDYFIVGDKE >gi|229269867|gb|GG666044.1| GENE 323 341071 - 341898 849 275 aa, chain - ## HITS:1 COG:MA3915 KEGG:ns NR:ns ## COG: MA3915 COG0500 # Protein_GI_number: 20092711 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Methanosarcina acetivorans str.C2A # 111 227 148 257 293 70 37.0 2e-12 MKQVNFMDDDKTKADYKNWVPKSLLKNLIFASLAAFILFIAFGVSDFVFSGRTRLICALI LGLATLILIFFASWMRFLYRAFDYNGKRKLAKVIIEGTADYVKIPDGGVGLDVGCGSGAL TIACAKKNPKATMVGCDIWSGTYKSEFSKKLCEDNAKLEGVENVKFEEGNAVNLPFEDES FDAVTSNYVYHNIAGQNKQKLLLETFRVLKKGGVFVIHDLMNKSSYGDMNKFMEKLKKDG YQDVQLIDTTKGLFMGHKEALLLGLSGSTLLIGRK >gi|229269867|gb|GG666044.1| GENE 324 342399 - 343799 1937 466 aa, chain - ## HITS:1 COG:FN1408 KEGG:ns NR:ns ## COG: FN1408 COG2195 # Protein_GI_number: 19704740 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 5 466 15 488 489 301 38.0 3e-81 MNYSDQVLKYFKQLAKIPRESGNEKEVSDFLVNFAKERNLEVTQDEALNVIIRKPASAGY EDHAIVALQGHMDMVCVKVEGSDHDFEKDPIKLLEEDGWITADGTTLGADDGIGVAFILA VLDDDSLKHGPIEAIITTEEETSMGGAGRLDLSQITAKYLINIDSEEEGILTVGCAGGLD LEIEFDKKFEKADGDFIEVGLKGFAGGHSGMEIDEFRLNANKTLGRLLEGIDGVQIATIS GGVKRNAIASKANALVTVPNKDKAISLIKERIAEIKNEYKDVDPKGEIWVKEASFDGEVL TKELSKNIIDLLFVIPDGLYKKVGDSIVTSSNLGLIEDREGVIWISSMFRSEIDSQKFYK AAISKKIVESFGARAEITSEYSGWQREDSPIIDLAKEVWKDVHGDEMQIATTHGGLECGL FKKTLKDTEMISFGPEIQGAHSPEERVNIKSIANNFEFLIELLERI >gi|229269867|gb|GG666044.1| GENE 325 343803 - 345104 1133 433 aa, chain - ## HITS:1 COG:BH1152 KEGG:ns NR:ns ## COG: BH1152 COG0635 # Protein_GI_number: 15613715 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Bacillus halodurans # 60 431 88 492 498 241 35.0 2e-63 MKIYLKDNNKRKIAYDILNIFLDHEEMDFTDDESDAEIKIGDGLVDITGLNFFFKTNQEL KIILYDYLAKKTGYKSSWGTLTGSKPSKLLKNKSLGEIKNTYKLSDEKLKLLEKVKENQG RLSVCQDDFSLYINIPFCPTRCDYCSYPTLIGSHHDKGTYVAYLIREIEEINLPSNLDSI YIGGGTPSYLTADEIEKILTSINKKFTYKELTFEAGREDTLDIKKLEILKAGGVLRISLN PQTFNREILQKLNRDIDMDHFLKIYKAAKDLGFIVNMDFIVGLEGESVDDFSKNFPILQD LLPDNITFHALAIKSGSKYNEKGSTGEREDSLKIAEKIGDFTRENAYEPYYLYRQKNIIS NLENVGYQRNNTAQRYNVIINEEIGSILGLGMNANSKLLTGKKFRNPRNLRDYYQDFEKN LLAKNEMIEELRR >gi|229269867|gb|GG666044.1| GENE 326 345150 - 345788 620 212 aa, chain - ## HITS:1 COG:no KEGG:Apre_0314 NR:ns ## KEGG: Apre_0314 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 210 1 209 212 155 40.0 7e-37 MEKREKVFEITCPKCSNKFEKSLPTAIFSLGEQRDEIFQGKFADITCPSCANEFILNYRF AYTDEINLFMIVNDPAFVDKKARLAFSTGLGLIGAERKDELIKHNLRITYDYQALKEKIY IFEAGLDDRVIELMKYFIINSEDFAYKPNQIKDFIFTENKEFYLETVLNVGLKLDFSDIL YETILTNYGEFTKKDRSFLVDRTWAENFLKTN >gi|229269867|gb|GG666044.1| GENE 327 345844 - 346386 538 180 aa, chain - ## HITS:1 COG:no KEGG:Apre_0313 NR:ns ## KEGG: Apre_0313 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 180 3 181 181 207 69.0 2e-52 MKKLSTQKLVYMALFAALVYIFSRFFQIPIVTPLGQTRFHLGNVFCLLGGLLLGPIYGGI SAGVGSALFDLFDPVYFTSAPITFITKFAMAFVAGMIYKNRDRLVNTQKLVIAGALGQIT YVILYLGKTFIKNRLILGLTMEATMAEVIQKGSVSMVNAVISVIVATIVAIPLLKAVKFE >gi|229269867|gb|GG666044.1| GENE 328 346591 - 347715 1195 374 aa, chain - ## HITS:1 COG:FN1896 KEGG:ns NR:ns ## COG: FN1896 COG1172 # Protein_GI_number: 19705201 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 19 349 1 324 340 287 48.0 2e-77 MIKNKISTRHLVPIMFMVICVVGYILSGAQLGFITSELANRLVRNTFLVLSLIIPIIAGM GINFGIPLGAMAAQVGLIFSQDLGFTGLLGIAVAAVIAFPIAIVLGIFSGNVLNRAKGRE MITSMMLSFFMLGVYMLVIMFFTGTIIPIRDKSMLLSSGVGIKNSISLATAGAIDNALKY RIQIPLGKDQIKFDVPVLTIFIIGLLCVFITYFKKTKLGQNMRAVGLDQDVANNSGLNAD KIRVKSIIYSTVLAAFGQLIYLQNIGTLATYAGLDQAALYAAAALLVGGASILKASIVNA IIGTALFHLMFIIMPLAGKEVTGDAMVGEFLRTFISYAIVTISLILHEYNRKKEIKENRL KAIDANQKAEKVGA >gi|229269867|gb|GG666044.1| GENE 329 347708 - 348784 1218 358 aa, chain - ## HITS:1 COG:FN1897 KEGG:ns NR:ns ## COG: FN1897 COG1172 # Protein_GI_number: 19705202 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Fusobacterium nucleatum # 8 354 2 333 339 304 49.0 1e-82 MNKIKNFVAKVGIARFIIALFLLSLFIAAPAAGISVKSSLENVIARFGMFAILVLSLIPM IESGCGLNFGIPIGIVAGILGAVISLEFNIAGFGGIFLAMLIGATIGVVFGFVYGLLLNK IIGDEMLISTYVGFSFTAFMCIAYVFLPFKNPVSVLSYGGTGLRQQIPVGDYWMKNIQNS TGGVNSVGLLSDFLSFDLFGVRIPIGMLLFFALAAILVWGLFRTKTGTAMSVVGSNYEYA KASGINIKKVRLEAIVLSTAIAAVGIVVYQQSYGFIQLYQAPASFTFQTVASILIGGATL NKAKISHVIIGTLLFQGVITLTPTVINGLLSIDVSEVMRLIITNGMIVYALTRRIDND >gi|229269867|gb|GG666044.1| GENE 330 348777 - 350354 185 525 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 289 505 38 245 329 75 25 3e-12 MLMEIRGLSKSFGQNNVLKNVNFTIDEGEVVGLVGENGAGKSTLMNIIFGMEFIKDTGGY EGEIILDGEKIDFKNPTDALKAGIGMVHQEFSLIPGFTVAENVTLNMEKTKQSPISKVFG RGYELIDAKANIEDTEKTLDKLGLDLNPKEYVSELPVGHKQFIEIAREIKRENIKLLIMD EPTAVLTESEADILISSLKKLAEKGIAVIFISHRLREILDLCDKVIVLRDGEIVEDREAK GLKIKQIAGWMMGKSNRQAYVDDDQREIDEDDIIFEVQNLYVEMPGEMVYDANFKVRRGE IFGLAGLAGQGKLGIANGILGTYPVKGRAIFNGEELKLSDTSSILKKKIAFVSEDRRGVG LLLGEDIALNIAFNAMEVFDKFIKKIFTFKFRDDEAIIANANKYIDSLAIKTQGPFELVG RLSGGNQQKVCLAKAFTMNPDLLFVSEPTRGIDIGAKRLVLDSLKKANREDKTTIIMISS ELEELQSVCDRIGVVCEGKIVGVLDPTASAEDFGLLMSGEELVNE >gi|229269867|gb|GG666044.1| GENE 331 350426 - 351802 1893 458 aa, chain - ## HITS:1 COG:no KEGG:Amico_0357 NR:ns ## KEGG: Amico_0357 # Name: not_defined # Def: hypothetical protein # Organism: A.colombiense # Pathway: not_defined # 71 439 87 455 456 424 56.0 1e-117 MKPMMKKMTSLFLLAFVFMGLVGCQKVDDKAEDAASKQESTETKDTADKDASEVAVNNKA KFEKLKEGEKFHIGLVTSTVSQSEDEFRGAQAVMDKYGKASEGGIIVHDTYPDKIETEME TTISKIKAMADDPEMKAIIVNQSVPGTTAAFTEIRKSRPDIILVNLTPQEDILMTSGVSD LVVDADNISRGYRMVKAAQKMGAKKFAHITFPRHMAIETLAIRRAIMEEACKDLGMEFIS LNAPDPTTDIGTPGAQQYLAENIGPWIEKYGKDTAFFTTNDALTEPLLRGVAAGGAIFVE PDLPSPIMGYPSAFSIGLDDIAGDWPAILKRVEQVVIEKGGKDRMGTWAYSLGYTSTVSA VDLVIDVLKGKADITNQDDIKKAFEGETPGAKWVVSKMINMANGKELPNYALVAQDTYVF GKGYLGMTEEKVDEKYRKINVNVEDMVEKQKESEGKFE >gi|229269867|gb|GG666044.1| GENE 332 351959 - 352453 374 164 aa, chain - ## HITS:1 COG:SA1682 KEGG:ns NR:ns ## COG: SA1682 COG4129 # Protein_GI_number: 15927439 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 7 154 4 143 364 58 24.0 4e-09 MQVKFPGPRIRKTGLAVLISMIISHYRPGEGLAFYSAIAAIICMQQNVHQTFHKGLGRII GTLFGGTIGLTYLLTFPSKKIPDIVGLFVIAILVTIIIWVMSMINKKDAVSIAGIVFLSV TINHAGDLVPFNFALNRVIDTLIGVIVAFLVNYIDFRLKESLKF >gi|229269867|gb|GG666044.1| GENE 333 352444 - 353238 844 264 aa, chain - ## HITS:1 COG:no KEGG:Apre_0309 NR:ns ## KEGG: Apre_0309 # Name: not_defined # Def: inosine/uridine-preferring nucleoside hydrolase # Organism: A.prevotii # Pathway: not_defined # 1 264 1 279 279 189 44.0 9e-47 MEYQKPFIYIDTNFSPADGLFIKMALDSFDFELVGLSANRSYMSSAAAGENILGLVNSED LFLSVAKNFDDKKSKLDEEIFIPEADYLEDMDAYENLYDLASDCGRLDIIASGDLANIAK ACREFEDFTDFIDHIFLSIPDLKSLTKEELTDLDLILSSGINIFVIDKKFADNFILEEKD LENILKNHPQMEKLLKTYDQEALTGALLLYLSQRPEAFIFEEAGLKVNFDEKSLESSEAR PKIYMVNKVNEESFYDYLRAILCK >gi|229269867|gb|GG666044.1| GENE 334 353306 - 354955 1365 549 aa, chain - ## HITS:1 COG:no KEGG:Apre_0408 NR:ns ## KEGG: Apre_0408 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 549 2 553 553 371 43.0 1e-101 MNKSNILTLAKYSLKESFFPYMPRKTVPNMPKSFLGRILLLIWTYIFFGAVFTGVFKASA YLYVANDMDFMYFTSFGMSMTLMVFLFYLPQIFSNLYTKSAIANYQTMPISEGELFVGKA FGGVLSFVDFLLYLVIGLVIYFGEAGFDPWVLVMGILLYLPMVYLPYGILSLFLLVIKKF TNVNRHAKLFKTIGYLIMFGIMGVIYYFSFSASNSSGMGKMNVDINQITQTLSMVSNVFF NAKIYGLAVAGTMSQRLIFTGLIFALCLLLAFISYKIANKFYYEAVFDEHLDTSKKEATP SKDIKIEAGSQFKAIFKKDLKTLFSNIVFLSGPLGMVMVILVMGFVQARTAMEESGVDPA SPELLLFAFLISLGVGLFIWLNGGLANTALSREGKSFYLIQTLPIDPKSHMRARFAAAYV VACGINLILALAYTFLLKLTILGGLVIFVGLSLTCAFATMVSLYFGTFMVYTQWKKPQEI QQSGGLKAVGIYLGSLLVMGLLGLTVFAITELTDNILIGAGTGLLVVLIIVFLVYRATLK KYTKGFMDV >gi|229269867|gb|GG666044.1| GENE 335 354948 - 355682 311 244 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 1 216 7 222 312 124 33 7e-27 GEINMIEVKNFTKEYTVEKKAVDDISFEAKDGEIFGFLGPNGAGKSTTIKSIVGINSKTK GEIFINGIRLEDDPMAYKSQFSYVPDNPELFENYSGNEYINFIADIYGIDTETRKERLDY YLNFFDIREAMKDQISTYSHGMAQRLAIIGALIHDPQVLILDEPMVGLDAKSAFNLKQIL RQRANEGKCVMFSTHVMEVAQELCDRIGIISKGKLIAIGTLDEIKHIANNDGSLESIFLE LTDE >gi|229269867|gb|GG666044.1| GENE 336 355685 - 356086 246 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485584|ref|ZP_03915900.1| ## NR: gi|227485584|ref|ZP_03915900.1| hypothetical protein HMPREF0072_0987 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0987 [Anaerococcus lactolyticus ATCC 51172] # 1 133 1 133 133 216 100.0 5e-55 MSFISYRSFYLVLTINKNIFHNSAEILVGFISLNHLYILLVTFQNPNPTEVNIASTINEI INSLKAPRLKAVFPSQAVSKPNTLVRNFMIDKTIASDPLTIKAQAHIPVIGNINIHTQVA IKYHFAFSTTFSL >gi|229269867|gb|GG666044.1| GENE 337 356162 - 357184 1381 340 aa, chain - ## HITS:1 COG:sll2012 KEGG:ns NR:ns ## COG: sll2012 COG0568 # Protein_GI_number: 16330303 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Synechocystis # 76 333 56 306 318 123 34.0 4e-28 MDKINLKDKETLEKLRDYLDTSDLSDEELTEIVEAMTDEQREEILDIISEEDDEDFDDDD DLIGSAKKGVNTSLAPIRRKDMMKLSDLNNEEIVEQFQLGNQNALAALVEKNQGLVRSRA SYFFRSHGNDLDLEDLVQSGMLGMIRAAEKFDLTLGYKFTTYAYKWIDKAIRKAINKEGH TIRIPAGKYLKLNKLKQILKANPEASDEEIYRILENEGINKKQADDLFLINRNQVNSTSL NINLDSEDSTGDELMDMVGDESTPVDMLILEKDMENFLMQALDQLTDREKQIIIYRYGLD NEKPKTLEQIGAIYDLSRERIRQIENQALGKLKDYSDSIG >gi|229269867|gb|GG666044.1| GENE 338 357215 - 357739 571 174 aa, chain - ## HITS:1 COG:CAC3153 KEGG:ns NR:ns ## COG: CAC3153 COG3688 # Protein_GI_number: 15896401 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein containing a PIN domain # Organism: Clostridium acetobutylicum # 11 172 6 172 172 90 37.0 2e-18 MVLVKKNITYVDGYNVINKWPKLREATRESLATARDNLIEDLAEYSFLTGEKLVIVFDAY NLDRLKETSIEKYGMKIVFTKRFQTADTYIEAELSRIARRHNVKVVTDDGQVQNMALVKG ASRMTALELKTDLDILRSKIKKTKKASFNQNYDAYPISKTLKAKLDELKIDLDD >gi|229269867|gb|GG666044.1| GENE 339 357726 - 358445 470 239 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 3 235 3 245 255 185 38 2e-45 MGDRLMDKIYGRKPVIDAIDSGVKIYKAFVIKQNSKIVEEIIAKLNKANVEINFVDKRFF DKIELNHQGVMVEAESFEYKDLRDLDKYQRLIILDQIEDPHNLGAIIRSAESFGFDGVII PERRSASVSPIVYKTSAGAINNINIIMVKNTNRAIEEIKEAGFWVYGLAGEASSPIDQVD LKGKVCLIVGNEGKGLSRLVRENCDILINIPMKGFVNSLNASVASAIAMYEVLRQNGFS >gi|229269867|gb|GG666044.1| GENE 340 358430 - 359848 1564 472 aa, chain - ## HITS:1 COG:CAC3177 KEGG:ns NR:ns ## COG: CAC3177 COG0215 # Protein_GI_number: 15896425 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 470 1 460 464 469 53.0 1e-132 MKIYNTLSRTKEVFKPIEENKIKMYVCGPTVYDYMHIGNARPLVIFDTFRRFMTYRGYDV TYVVNFTDVDDKIIKKSIVEGITTKEVTDRYIAQYMIDAKALNLDEEDTIHPRATEVMDD IINFVKGLIDKGMAYVSDGDVYFDVSKKTDYGKLSRKNLDDLVHGASQRLDDNDAGKKKN PADFTLWKATKLSGEVAWDSPWGKGRPGWHIECSTMNKKILGDTIDIHAGGEDLEFPHHE NEIAQSEALNDVKFANYWMHNGMIQVNGSKMSKSVGNFFTLDDIKKEYDLMTIRFWLLTT SYRQPINFTKEIIDQAQASLDRLNNAYFKAEELLAKTSEKEISSVEKDLLQILVDKENEF VSVMEDDLNTADAITVLFDLAKFINTNLEGDSSKDFVEKTFETYSRLYDVLGLLAKKKES EVDEAFIEEKIAERNSAKKAKDFAKADKIRDDLKEMGIILKDTREGTKWEIG >gi|229269867|gb|GG666044.1| GENE 341 359848 - 361329 1765 493 aa, chain - ## HITS:1 COG:BH0109 KEGG:ns NR:ns ## COG: BH0109 COG0008 # Protein_GI_number: 15612672 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Bacillus halodurans # 2 486 3 480 485 405 44.0 1e-113 MSEVRVRFAPSPTGYLHIGGLRTALFNYLYARHTGGKMLLRIEDTDRTRFVEGALENLLK ALKWSGVEIDEGVMLDENGHVTEKGDCGPYIQSERVKAGIYDKYIDQLIEEGKAYYCFCS QERVDKVRDQMRADGLTPKYDGLCRSIPLEEAKQRVANGEEHTVRLKLPKDYDISFNDRI KGKITFNTDDQDDQVLIKRDGYPTYHFAVVVDDHLMGITHVVRGDEWISSTPKHVYLYEA FGWQAPEYIHLPTVLNKDHKKYSKRNGDGMVEDFIEEGYTPEGLINFLSLLGWSPDSEEE IFTMEELAKQFDFDRVNKTGAVFDKKKLDWVNGHYVRELSPEELAKDIKPYMIKAGLIDE SYPEDKLVLLAETWQSAIDKFSDAPELAKNYYIKSDEIEYDDDAKEAISTENAKTLFAAF LNQLDQVDEIDADFAKSVMKTIQKETGIKGKDLWFPVRAAVTGSVHGPDLSNAFLIMGKD LVKDRLEYVRDNF >gi|229269867|gb|GG666044.1| GENE 342 361511 - 361969 484 152 aa, chain - ## HITS:1 COG:agaV KEGG:ns NR:ns ## COG: agaV COG3444 # Protein_GI_number: 16131025 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli K12 # 1 141 13 155 169 81 30.0 5e-16 MGEIFLARIDSRLASGQVVKDWCEKYGLKKVIIANDRTAEDSIRIEVMDLTIPEEIESTY LKVAGVKDFLYKNEGAYFLLVETTCDLEKILDAGVSIKEVNVGIIHLSIGKKSLTELVAV DENDLRIFDKIKNQGAKIFIRTSVFDDEEKII >gi|229269867|gb|GG666044.1| GENE 343 361969 - 362616 776 215 aa, chain - ## HITS:1 COG:TP0554 KEGG:ns NR:ns ## COG: TP0554 COG0546 # Protein_GI_number: 15639543 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Treponema pallidum # 3 211 9 217 222 136 34.0 3e-32 MYIFDIDGTLLYTIDTITYFINETLKKFDLSSCPKDKVEAFVGNGPVVLCEKTLDYVDAS KDQAFRKNFLDSYNKAYDDDPAYLTKAYDGVKEALDELKKTGKPLVCFSNKPDETCKKVI PVVFGEGFFDAILGYRGDYERKPSPAGIIILKEKFGVDFSDIIYFGDSEVDMKCGKNAGI FTVGVSWGFRDRKVLEDANPDLIIDDPSQMVIRRA >gi|229269867|gb|GG666044.1| GENE 344 362768 - 364210 1736 480 aa, chain + ## HITS:1 COG:CAC1780 KEGG:ns NR:ns ## COG: CAC1780 COG1488 # Protein_GI_number: 15895056 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 1 480 9 489 489 558 58.0 1e-159 MKEIRNLTMLSDFYEFTMANGYYENGMKDTVAVFDAFYRKNPDGGGYAIFAGLNDIISYI KNLHFTDEDIEYFRAQGCFSDGFLEYLKNFKFTGDVYAFPEGSVMFPGEPIVTVKAPIIE CSIIETYLLLSMNFNSLIATKTNRIVSSAGDRLVMEFGARRAQGADASITGARAAYIAGA PITSNTYSAKKYDFKASGTMAHSWIQAFDSEYEAFKTYAKMYPTNCILLIDTYDTLESGL VNAMKVFKEELVPRGLTGGVRIDSGDLAYLSKEVRKRLDENGFKDFKIVASNSLDEFKIE SLLAQGAKIDSFGIGERLITAKSDPVFGGVYKLVAIEKEGELEAKIKVSENVEKITTPGF KKVYRLYDKETGKAEADYIALRDEEVDDSEPLVIFDPLFTWKMKKMKNYKARQMQVKIFE KGKLVYEEPSLEKIAAYRKEEVASLWDEVKRYDAPHNYYVDLSQKLWNLKQKLIIEAKSK >gi|229269867|gb|GG666044.1| GENE 345 364242 - 365504 1041 420 aa, chain - ## HITS:1 COG:no KEGG:Apre_0148 NR:ns ## KEGG: Apre_0148 # Name: not_defined # Def: hyaluronidase # Organism: A.prevotii # Pathway: Metabolic pathways [PATH:apr01100] # 2 419 4 424 431 418 50.0 1e-115 MKKGIIEGFYGIPWTFEEKMSMIKFLAEIDMDQYIYAPKDDPYHNKEWRKPYPEEEIGKI KALAELSREEGIEFTWAIHPGQNPFDFDLYDEEISKIFAKYRQLMDAGVRSFGLCMDDID KAVAYEKRKAHMNLIRDLADFVEKETGNGLYFVHPWYNDAWINEQGYEYEALLRDIKNLN VMWTGNQVVAPISHKSNEDFRKRTGKKPYIWFNWPVNDYRPDKIFLESFEFYDSREINFD GFYLNPMNEAEASKIAIYQVGEYLKNPLAYEPEDAFIKAINFLEPKASGDLFELASSFCG SLVYERTEGKKFSEDREIKRAFDQKDLKTLNYLLGEKIKAAEYYQKNHANEDLYREIKPF VVSLQNLSKAILAKFDGNINEAENLYKESKNIKIQVLGDEGLEEVNVKTSEVLEEIYQKN >gi|229269867|gb|GG666044.1| GENE 346 365506 - 366450 968 314 aa, chain - ## HITS:1 COG:SPy1810 KEGG:ns NR:ns ## COG: SPy1810 COG1482 # Protein_GI_number: 15675642 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannose isomerase # Organism: Streptococcus pyogenes M1 GAS # 1 314 1 316 317 285 46.0 1e-76 MEKILFLEGKFSEKIWGGARLKTEYAYPIPSDKTGEYWAISGMEGASSVVTNGDFKGESL RDIYRNHKDLFGNSKEENFPLLVKIIDAADDLSIQVHPDDEMAARLENSKGKTECWYILN EEDASIVFGLKVKSKEEAIKLIDERKWTDLLREVPTQKGDFFFVRAGTVHAIKKDSLILE IQQASDITYRLYDYDRKDADGNLRQLHLEKSKEVIKIIKEEGQIQKISQQGYEERILTEN EYFEVREFKFKSEGVFKRAKPYLLESVIEGAGEIEIDGEVYPLKKGDFFIITNFAKDYKI TGKLTIIEANPMEV >gi|229269867|gb|GG666044.1| GENE 347 366452 - 367321 1011 289 aa, chain - ## HITS:1 COG:PA3999 KEGG:ns NR:ns ## COG: PA3999 COG1686 # Protein_GI_number: 15599194 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Pseudomonas aeruginosa # 13 263 10 254 386 102 29.0 9e-22 MRKIRNLFIIALLLIIAVFISTRVKKQAEDQNFISKAVYLYDLTDDKEVLAKNENERLPM ASLTKIMTVRVALKHIRDLGQIAPVDTDAYYRAVEMNASMAGFNGGETTTYRDLLYATML RSAGEAADSLAINISGSMDKFVDLMNQEAKDLKLKNTSYANADGMDNPSNYQSAKDCAML IKDSLKDGNFRAIFTKKDFKTSPTVNHPDGVYLESTIFYHLKKYQQNGFEIIGGKSGTTD DAGLCWATLAVKNNKEYILVVMGVPYDDINNLNDGHIEETLRIYESIGD >gi|229269867|gb|GG666044.1| GENE 348 367533 - 368402 237 289 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 285 1 297 306 95 28 3e-18 MKDIIIIGAGPAGVSAALYAKARGKDLLLLEKDRVGGLISHVSKVSHYASLADNESGEEF SQKLKDQLAFSKIDVTYEECLSIEKKDDFFLVKTNKNTYECKKLIYAAGSHLKELDIDYK GFEVKHWPYGNEESLKGKTVIVNGGSDGASKEALYISKFAKEVHIVQNQDALMCIDEFKK QIEASDKIKVHTSTSLKDIEVRDDKCVKAILDDCVIEDKEGIEIYVQIGQNGNTDLVKDL AEIKNTFLTEDISSKVDGLFFAGDVRIKDVKQIATAVADGTLAGIKASK >gi|229269867|gb|GG666044.1| GENE 349 368464 - 369771 1631 435 aa, chain - ## HITS:1 COG:lin0374 KEGG:ns NR:ns ## COG: lin0374 COG1053 # Protein_GI_number: 16799451 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Listeria innocua # 1 434 95 506 506 149 29.0 9e-36 MPGGHTALSGGFALITASKTQKDVYGVKNDSVESVYEDNMKNGGGKSIPEDLKLYAEKMG EATDWTVDYIGSKIPEKLTPLGENSVDRAMIYEGAGAGFVQSLLDKIKDTKIDLRTNTKV TELIYEDGKVVGAKATMSDGTPVEVNAKAVLLATGSYGANKEMLPESLDKFVFYGAQLAQ GEGQKMAQDIGADVVNQSYVELFENGVEWKPGIAKSTYNGSMATWDVSGILVDRAGNRVV NERSAGINIVKEMEKQEDGRLFLIMDAATYKAFEDNVAGYGITKKMLDDWIATDGAKIPY FAKADSLEELAKKVKIDPEGLKKTVERYNGFVANKKDEDFGRDPNYMKAKISENGPYYVV EQLPRYATTLGGLKIHNQLRVINKEGKAIEGLFASGDVAGGARGDDSIPGADFGWAVTSG YEAGRTISDYLKNKN >gi|229269867|gb|GG666044.1| GENE 350 370010 - 370312 239 100 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485598|ref|ZP_03915914.1| ## NR: gi|227485598|ref|ZP_03915914.1| hypothetical protein HMPREF0072_1001 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1001 [Anaerococcus lactolyticus ATCC 51172] # 1 100 1 100 100 164 100.0 3e-39 MKKYILSRRTCLLPLSACSKDEKASEDTKEKEQPAKAEKSIDDGSFEEVATGHNCDIKLS VTFKDNKIEKIDVVESSETPTIADTGFKEIINRILEHQNL >gi|229269867|gb|GG666044.1| GENE 351 370398 - 371768 1362 456 aa, chain - ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 450 1 452 458 312 38.0 7e-85 MAKVKKAYECTNCGHIQNVWAGQCPACKKWGSLVETTIKEEKVGNKVVLDDDKKAKMLRE IEINESERIHSAYEEFDRAVGGGLVRDSVSILTARPGAGKSTLLLQLSKSYADEGLKVLY VSGEESESQIKSRSQRIMKDEPKNLWILSTNSMDLAIKEIKATGADIVVLDSIQTFSLQE FDNKQGSPTQTIEVAGKAVEMAKNPEKKRAFIMVGHMTKTGEMAGLRTLEHLVDTVLILD GSPDEDLRVLTSSKNRFGRTGEIGLFSMDEEGLIEITNPSEYFITQRDSEIEGSAISVTK EGSRLLEVEIESLVSKSFMPYPQRIGDSLRRDDLNTLISILQERAGLNLFDMNVIIKTTG GLKLSEPSVNLAIIMSIASSYLKKPVSDKVVFIAEVGLTGELKKVPQAKQRVKELERLGY EKVYLAKNSLEQKDFKAIKIIQLANIKEVITNVFKV >gi|229269867|gb|GG666044.1| GENE 352 371761 - 373062 1468 433 aa, chain - ## HITS:1 COG:XF1428 KEGG:ns NR:ns ## COG: XF1428 COG3572 # Protein_GI_number: 15838029 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Xylella fastidiosa 9a5c # 9 379 17 396 454 176 29.0 6e-44 MERLEKIQKIVDFIKAGEKDEKNFRLGFEIEHFVVNKDTLESQSFYGHDGVGEILEDLAS LGYKKADETGMAFSDGSVDISIEPAGQFELALRAKASVGELFEVYKTHMERLVPIFERRG LLLVALGYHPKSKIDEIKIIPKTRYDFMYKYFEKYGGEFAHNMMKGTSSMQLAVDFKNEE DFKKKYFLASALSPFLYSVFDNSLIFEGEIYIDRNLRQTIWEYTDRDRTGLYDFAFDSDL SYKKYSEKILDTPMIFMPTPDGETYIGRKTLDELMTEENADEMVNHALSIVFPDVRVKSY IEIRMPDNIPYPYNMAAAALIKGIFFDDQTLDKVYELFSDMTYDQAQKLKSNATRMGIFA LYENVEIFQHVLDIIDIIRPVLEENENKYLDELESMLDFGIVPRDIFAKIYKENPKRAVY EFSVNRFVEAING >gi|229269867|gb|GG666044.1| GENE 353 373127 - 373585 469 152 aa, chain + ## HITS:1 COG:MYPU_0950_2 KEGG:ns NR:ns ## COG: MYPU_0950_2 COG0350 # Protein_GI_number: 15828566 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Mycoplasma pulmonis # 2 148 9 154 161 122 49.0 3e-28 MKYGYFKSQLGIIKISYEKKIRKIELVDKIDENSEENELFNIFKKQLLDYFEGKRTDFDH LDLLDPKGTAFQKSVREALLKIPYGKTRSYKEIAKAIGKPRATQAVGTAIGKNPILIIVP CHRVIKADGSLGNFSYGSQIKAKILKIEGINF >gi|229269867|gb|GG666044.1| GENE 354 373693 - 374778 1533 361 aa, chain - ## HITS:1 COG:MYPU_6410 KEGG:ns NR:ns ## COG: MYPU_6410 COG3839 # Protein_GI_number: 15829112 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Mycoplasma pulmonis # 2 361 34 392 392 370 53.0 1e-102 MRVKLDNLGKKYEGRDKFTIRNIDLDIKDKDFCAILGPSGCGKSTLVRMIAGLNSITEGT LYFNDKIMNTVEPKDRDIAMVFQSYALYPHMTVYDNMAFSLKMKNERKEVIDQRVQEAAD ILQLRDYLYSRPSDISGGQRQRVALGRAIVRKPSVFLMDEPLSNLDAKLREHMRVEIVRI HNQLETTSCYVTHDQTEAMTMATKIILLDQGKIQQVGAPNEFYQRPENLFVAGFIGSPTM NIIEGKIENGMFVNKSGLMKIKANDKDAAALKNYEGKEVYLGIRSERFIPGEHEYNSVTA TIEVIEMLGKEQIIYSRMEDGTELVVSQPGHYEYRKGETHTFSLDPEALHFFDGETTNRI N >gi|229269867|gb|GG666044.1| GENE 355 374783 - 375676 1013 297 aa, chain - ## HITS:1 COG:MYPU_6400 KEGG:ns NR:ns ## COG: MYPU_6400 COG3833 # Protein_GI_number: 15829111 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Mycoplasma pulmonis # 5 297 20 314 314 231 44.0 2e-60 MFKKKKNKDLYLSDLQPLTAAGKVALTLSYLILFIWAAIIVVPLVIMVVSSFNGNQGQYI SMTGDFVFSVNNFKYLFEKTQFLRWVVNTLKIATATTILTLIFVSFTGYAYSRFRFRGKK ASLITIMLVQIIPAFAGITAYYAIHTIISGVVPVFSRTMMLILIYSGGAIAGNTFILKGY LDSISQELDEAARIDGCSNFQVYRLIIMPLARPMLAIIALQCFIGPFLDYMMPKILLTNP ADYTLATGLFTLISDVRNMNQPAFAAGGFLSAIPVMLLFLFLQDELVGGLSSGAVKG >gi|229269867|gb|GG666044.1| GENE 356 375678 - 377708 1840 676 aa, chain - ## HITS:1 COG:YPO0855 KEGG:ns NR:ns ## COG: YPO0855 COG1175 # Protein_GI_number: 16121163 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 259 674 22 430 435 304 38.0 3e-82 MTYEKSLIDRRGRTYPRKNQYIIDLIEAKEIGSSPKYTKANHPYNIKLKEYENQKKALLE KAKSEASSDKHLPTDGKLKDLYIEKLVAEKMRSFYEENKDLSYDSLLDYRLNELDVNEIP KILDHDKFLKDSLKDALERQKNLTSEYIEAESKFIEADRKVLKERYEHDVAEIEEAFKEE RISKKAYKATKEQLKQKFKDQNLKIDYRNPERSIKEEIESYNYKLKEDLKHSLKILEEER SDARRRTPIEVEKERPFKSIITAPIPGLGQLLNGQWQKALMFFIGALFVYFIAIPYALGF GNYQGDGIAGLISLAQGGKRLDRSIIFMIEGILALAFILIGLCILIGSFLDAYRAEKGEI QGIRPNSFFETRKYLRTDGFPYLITSPALLVIVFIVIVPIVTAILISFTNMDPQHQNKFT WIGLNNYISIASGQGIAGKAFWHIFGWTIMWTIAASTLAIVLGFIFALMVNNERIKGKKF FRTIYLLPWAIPAFITIMFFSIMTSRGGVITEAVNSLFNTSLDIKNNTVQTRTALVLLQG WLGHSYIFLLTTGVLQAIPKDLYEAASIDGATGFQRTLKITIPLVLFQISPMLINQYTFN FNNFSIIYLFNGGGPFNPQVYGNLAGSSDILISYIYNLTMNSQYQAIGAAITVFISIILI IISFFGYMKSSAFKEY >gi|229269867|gb|GG666044.1| GENE 357 377714 - 378118 256 134 aa, chain - ## HITS:1 COG:no KEGG:Apre_0130 NR:ns ## KEGG: Apre_0130 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 134 4 137 138 126 60.0 3e-28 MEKVKQRNKFLLKILIISALIILNFSLEAMMMAKDPSVFTTISKINPELSYDDFLNSIIF SLFIKVINPITISLYTFFTIKKYGINKTYKLFFGAMTLISIVNLFFSFSIGSVFYYLGLI LNIFLLIVITRQER >gi|229269867|gb|GG666044.1| GENE 358 378166 - 379500 1978 444 aa, chain - ## HITS:1 COG:SPy1306 KEGG:ns NR:ns ## COG: SPy1306 COG2182 # Protein_GI_number: 15675256 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Streptococcus pyogenes M1 GAS # 3 411 6 386 419 65 25.0 2e-10 MKKGIKTIMALSLAFVMAACGGAKDGGKEAAEGGKEANKDTSAKLTVQAEEGWVDYYKAA AERVKKQFPNADIEIKTVGSFDHLDIIDATAATNEDVADLFAIPADRLYGLHGNDILAAI DSQKLAKEIGGWDDFDKGIGGNFKIDDEYFAFPFNIETLITYVNKKNAEEKKVDLSKPIE INDVADESTVLLPIFDAWYGVAATNSSGIELLGKDKDGKLFSDFTKEWDELEPEKQATVK ALFEYWKKHNEAGTQLFDADAGWGYIDDTFKPGKGGVARLGGPWDAAPISEQAGEGNLEI FPIGQLTLAGKPLTHWQGGWGLAMNARIEEDADKVALAEAMIKEIVNPEFAADLYKATGK VLENVSAEKYQGMDLPETDKKIIAATITSYKEAPARPLFKEWGDVWDTYKNAILSWNSVK PADEKAAYAELKASFEAMMANFNH >gi|229269867|gb|GG666044.1| GENE 359 379755 - 381260 2217 501 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 500 9 472 472 505 51.0 1e-143 MACTTILVGKNASFDGSTLVARNEDSGSGSYSPKKFVLIKSEDQVKVYKAVISKVEIPLP SNPLTYTAMPEAVAGQGIWGACGVNSKNVAMTATETITSNERVLGADPLVVYQKPVGKKG DKDFKEEVPGGIGEEDLVSIVLPYINSAREGVLRLGSLLEEYGTYEKNGIAFQDENEIWW LETIGGHHWIARRVPDDSYVIMPNQLGLDTFDLEDALGKGENYLCSADLKVFIEKHNLDL SLDGNINPRDAFGSHSDADHVYNTPRAWILQRYFNPRSNTYDGIDADLRPDDDDLPWARV PERKITVEDIKYALSHHFQGTPYDPYKNHGDKSVAGAFRPIGINRNNFLGLTQIRKDMPE PIKAIEWLALGSNVFNTMVPFYVNITDTPAYLRDTTGKVTTESFYWINRIIAALADPHFA DTANLIERYQEKVGSFGWEMIYKTDEKVIKENLSREASVKVLEEANQEIADFLKEESQDL LDQVLYVASNKMKNSFSRSDA >gi|229269867|gb|GG666044.1| GENE 360 381313 - 381960 785 215 aa, chain + ## HITS:1 COG:no KEGG:Apre_0312 NR:ns ## KEGG: Apre_0312 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 215 1 219 221 215 50.0 1e-54 MSKTLGPIHYLMYEKIKFQDEITDFLMDGDFSQIEYEPVSTKPLEEILDQENIHGYLQEK IDIVESRLAKALSLCKNPSEKLFKLGKECGRDKDFSNFEQIFTDLNYYLLDGMPCDQGLS AVLDGDSLYLITNTNLHKKYQDAIDLENSRNASCEGGHSHDHHESFEVGAGMVGDLKSEE STYHKYRLDFLRGYFSESPYEVELVNGINYKITKK >gi|229269867|gb|GG666044.1| GENE 361 382011 - 382175 88 54 aa, chain - ## HITS:1 COG:L125503 KEGG:ns NR:ns ## COG: L125503 COG0619 # Protein_GI_number: 15672308 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Lactococcus lactis # 1 53 220 272 273 62 52.0 2e-10 MELRRFGKNKTRTWYKARPFGKNDFVILFITLALVGIGISLFFINQGRFYNPFI >gi|229269867|gb|GG666044.1| GENE 362 382474 - 382794 380 106 aa, chain - ## HITS:1 COG:SP0484 KEGG:ns NR:ns ## COG: SP0484 COG0619 # Protein_GI_number: 15900399 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 3 99 4 100 276 87 47.0 5e-18 MNKTLGYIKNDTFIHGLSGTTKLLAFILLSVIVMTSYDTRFLILVMGLSLLAMKIAEIHW EDVAFLIKIVAVFSLINILAIYIFEPAYGVGLYGSRTLILGTGLAS >gi|229269867|gb|GG666044.1| GENE 363 382791 - 384500 1987 569 aa, chain - ## HITS:1 COG:SP0483 KEGG:ns NR:ns ## COG: SP0483 COG1122 # Protein_GI_number: 15900398 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pneumoniae TIGR4 # 4 557 2 546 560 521 50.0 1e-147 MGNRQDLVVFDKYNFKYKSQVEPSLFDIDLKVKKGEKIIIVGPSGSGKSTLAKSLNGQIP NTFPGDITGSCLIDGKDLLDSSIFDLSLSVGTVLQDTDGQFVGLTVAEDIAFSLENDNVD QEEMKKIVEKWAKELNLSKLLEMKPGELSGGQKQSVSIAGVLVSDVPILLLDEPLANLDP KSGRKTMELLKRLADKLGYTVIVIEHRLEEALLLDPDRIIAVDGGKILADMSPTDLLKSD ILEKIGIRRPLYIDAMKYAGIDISGYEKLGDFDEVEISPSDLAKIEGWAKGQVGKEIKKT NEEVIKIENLTFSYEKENILENLSLEIDKGEIISILGPNGAGKSTLAKLMCGFLRPDSGK IILAGKDSKDLSIKEIADKVGFILQNPNAMISKTMIFDEVAFGLRVRGVAEDVIEKKVHD ALEICGLYSFRKWPISALSYGQRRRVTIASILVLDPEVIIMDEPTAGQDFHHYTKMMEFI RKINKEYDLTILMISHDMHLIEEYTDRALVIGDKKILADTTPAELFSQSELIDRANLAET SLFKLGQRLKSMDALDFIETFIGYERSKR >gi|229269867|gb|GG666044.1| GENE 364 384506 - 385057 815 183 aa, chain - ## HITS:1 COG:SA2477 KEGG:ns NR:ns ## COG: SA2477 COG4720 # Protein_GI_number: 15928271 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 2 183 3 184 184 203 59.0 1e-52 MKKNNSITTIVAIGIGAAVFFILGRYLSIPVGFIPNTSVETTYPFLALMSVLFGPVAGGL IGLIGHAIKDLLTYGLWWSWVVTSGITGFGYGLVGSKLDISQGTFTKKDMVKFNVGQIIV NVLCWGIIAPILDILIYSEPANKVFAQGFVSAGLNSVAVGILGTILIAAYAKTRTADNSL KRD >gi|229269867|gb|GG666044.1| GENE 365 385057 - 385893 857 278 aa, chain - ## HITS:1 COG:SA2478 KEGG:ns NR:ns ## COG: SA2478 COG1912 # Protein_GI_number: 15928272 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 2 276 3 278 282 310 55.0 1e-84 MNTLVFQSDFGLGDGAVSAMHGVSFMVNPDLTIDDLTHEIMPYNIFEASYRLLQTIKYWP EGTVFVSVVDPGVGSSRHSIVVKTKSGHYIVTPDNGTISHVAKYIGLESARIIDEIKDRL PFSENSHTFHGRDVYAYNGAKLAGDISYYDFLDELSLDELCYETIKDAKITDGVIEGTVD ILDIRFGSLWTNISLDMLNEAGIKQGDMIKVIIYYKGIKKYENQMTFGHSFADVGLGETV AYINSLINLGIAINQASFSATYQIGTGADWSIFIKKEQ >gi|229269867|gb|GG666044.1| GENE 366 386359 - 387546 1501 395 aa, chain - ## HITS:1 COG:lin2952 KEGG:ns NR:ns ## COG: lin2952 COG1473 # Protein_GI_number: 16802011 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Listeria innocua # 6 395 8 398 400 500 60.0 1e-141 MNELLEEIFSEIDNHFDEMVACRRHIHQNAELSFKEVETADFVEDFYKDKDVKITSHMGG NGLRVVIDTGRPGKTIGLRADFDALPIKEETGLSFASKNEGVMHACGHDAHTAYLMVLAD ILREKKDKLAGKIVIIHQHAEEVPPGGAKGMIEAGVLEGVDNVFGIHVMSAMDYGTIQYH KGNTQTGRAMFKIKFQGKGGHGSMPHLSNDSIVAASHFVTAVQTVVSRRLSPYEVGVVTI GSFDGKGTFNIIKDSVTVEGDVRAMADETKKTIEEEIKTIAKGIGETFKVGVEIEYTDDY PVLYNDPEMTQLVVDAVKEAKIGEVTDIIDCGPQPPSEDFSYYAKERPSCFFYVGAKKED APYPHHHPKFDIREDAMKICAKSMAAVVVKYLGEE >gi|229269867|gb|GG666044.1| GENE 367 387690 - 389840 2695 716 aa, chain - ## HITS:1 COG:SA0850 KEGG:ns NR:ns ## COG: SA0850 COG0747 # Protein_GI_number: 15926580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Staphylococcus aureus N315 # 345 698 222 556 571 68 23.0 5e-11 MKNKKIYSSLMALALVLSLSACGSNTDSTGNKGSQTSGQEENKEASSSKGDQGDNLDDFQ KQTADDTIVLGVSTINGDFIQGYNNDANDVNARRFMGIEGNNGYSCYVIDEFGKFQANTA ALDKDPEVIMNKDGSRTTKFTIKKDLKWSDGKPITADDYLFGILLESDKDFNTLTGSLNV GADSLKGYEAFKKGDTDSFEGLDKIDDYTFSLTVDASQLPYFEVQALSNAGPTPLHYIGE NLGLAKDGKKLVVKDGYQVTDKDKENYKKSIDNQIALLKENFEKDNEGEDKGSEDYKKAK EELDKKAKDLEARKNGDVDPTRLLIEEAMIKETSDYRFNPAVTCGPYKFNKFENNMVVLD LNENYQGNFKGQKASIPHIIIQLVNRNIGPDLLENGDIDIWEGETDGAKIDQLKKAEEAG KIQLSSYERNGYGNIIFLTDRGATKYKEVRQAIASLMDRNEFVQAFLGGYGVVTNGMYGQ SQWMYKERGADLQEKLTNWVFNIDKANDLLDKTPYKFEKDGKTPWDKAKALDEFNKNQEV FDYYRYDDKGNKLVVNQYGAEQSPITSLISNQLPPNAKQAGMEYNVTAGSFSTLMDYLSF PKEDAQYTAFSMASDFSTPFDPWFYYSSQGPFNRSKVKDPKADEVTANLRKTDPSDKEGY LDKWEEFQKWYNDYLPEIPLYSNVFHTGYSNRIKGFDVITPVWQACDQINAMTLEK >gi|229269867|gb|GG666044.1| GENE 368 389881 - 390033 83 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485617|ref|ZP_03915933.1| ## NR: gi|227485617|ref|ZP_03915933.1| hypothetical protein HMPREF0072_1020 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1020 [Anaerococcus lactolyticus ATCC 51172] # 1 50 1 50 50 85 100.0 8e-16 MNKNTLGNEKLWGTKSFSLILPHLEIYKTEKRKLIYIQKSLTGMNNGGRV >gi|229269867|gb|GG666044.1| GENE 369 390437 - 392881 1914 814 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 795 9 810 815 741 47 0.0 MENNRLNKLTQQARRESYSLNHDYIGTEHLLLALMKTGSKATKALEAAGANYELLRSIVI NNIGRGTAVRPATEYSKKVRKILETARFYANNRRALATSEEDVLLAIINDEDSFTNIMFL LSGVEKENIKKQLLSMVRQEKSEGVANSKFSENITNYCTNLNDLAEAGKIDPVIGREDEI KRIIQILMRRTKNNPILIGEPGVGKTAIAEGLASEIVKGNLPAIMKGKTILSLDLASMIA GTKYRGDFEDRLKKLFEEASNRDDLILFIDEFHMVLGAGAAEGSMDAANILKPILAKGDI QIIGATTIDEYRKHVEKDSALARRMQEVMVDEPSLEDSKKIIEGLKSMYEDHHKVRITEE AINAAVDLSDRYITDRYLPDKAIDLIDEASSKLRILAFDDEQEDIDTHEDILEKLKAEKD QAVLDQDFEKAAKLRDIINQKKFDLEEEKEEESEGYKLAITYDDIANIVASWSKVPVERL TEDEKAKYAKLDKILAGTVIGQNEAIKSVAHAIKRARVGLKDPKKPIGSFIFVGPTGVGK TYLAKSLAKSLFGSEDRLIRMDMSEYMEKFAVSRMVGSPPGYVGYEEGGQLTEAVRTNPY SVILFDEIEKAHPDVFNLLLQILDDGRLTDGQGRTIDFKNTIIIMTSNVGVSSLAKATSI GFDLAEDKQEADNERNKEIITKAIKDSFAPEFLNRLDETIMFNSLSEADIKEITGLMLEK TRDRLNEIGIEIAFDERVVNLLAKEGFNSEYGARPLERHITKMIDDRLAEDILDNKLDKE MTIRLYVQNDKLCFRNITKGRKASKEARQEVNVK >gi|229269867|gb|GG666044.1| GENE 370 392871 - 393764 866 297 aa, chain - ## HITS:1 COG:lin0263 KEGG:ns NR:ns ## COG: lin0263 COG3869 # Protein_GI_number: 16799340 # Func_class: E Amino acid transport and metabolism # Function: Arginine kinase # Organism: Listeria innocua # 3 267 41 304 340 63 21.0 5e-10 MTYDESLVVMDMARDIFGDRLVLLSDLDDGTIDKLISEMVLSPDAPGKLAQVGIIFEGDT TLVINDRDHLSINISNFGLNLIGAYKKATEIEKILDDHLDFAFSSEYGYLTSGARNVGGG LEVWMKLFLFGLIDNPKTYAGFEQAMVYAGLYPQKFVPKGLKSYADDLYLLKNYGNYRQN PEAYLKKVEKNLETLVKNEKRFRRDYRIINNIDDREIEEEIDLIEKSLETGMVKSLDKMM KALYRLKKYQILGFKTKFSEEEINDLIKNLSSHKYKENFDAGRYEFLMKEMGESHGE >gi|229269867|gb|GG666044.1| GENE 371 393845 - 394429 545 194 aa, chain - ## HITS:1 COG:no KEGG:Apre_0125 NR:ns ## KEGG: Apre_0125 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 194 1 193 193 188 50.0 1e-46 MKCDKCGKEASVSLKVIFNGNSHNINLCSDCMKKYADIPEGSDLGKISSQNISINPKDLE GLLQKFIPSLEEVIDGFYEYKYNQANKDLSYILNVDEKSCPYCGNLRSNIRNGVFGCAYC YKLDKNLTDKVLKTYNNLSEYKGAYPRAEREFKEVADEIKNLSQRLNESVETEDYELAAD LKEKIDKLNMQVKN >gi|229269867|gb|GG666044.1| GENE 372 394431 - 394892 233 153 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764774|ref|ZP_02171828.1| ribosomal protein L14 [Bacillus selenitireducens MLS10] # 1 149 1 150 158 94 33 8e-18 MAGLTNQIERFLKLMLEDSVDGALEIGRNELASQFDCSPSQINYVLSTRFTPHNGYLIES KRGGNGFIKIITIVEEDDYISYLLRNLAKEMSESRANNLFRDLYERQYFNKNEYLMARYA ASDKTLADIEAKGRNTVRSSIVKSLLLSILARS >gi|229269867|gb|GG666044.1| GENE 373 395151 - 395852 622 233 aa, chain - ## HITS:1 COG:TM1511 KEGG:ns NR:ns ## COG: TM1511 COG2738 # Protein_GI_number: 15644259 # Func_class: R General function prediction only # Function: Predicted Zn-dependent protease # Organism: Thermotoga maritima # 6 229 3 229 230 176 42.0 3e-44 MYPYGFYFDRTYFLVLIGLVISMFAQANINAKFNKYRKIRSKRGLTGAEAAQMVLDYNNY RDISIKRVGGSLSDYFNPMTKEVALSATSFEDSSIASLAVALHEIGHVIQFKEGYIPLRV KSFIVPAVNFGSRLSFPILLVGVFLSQPKLVTIGLALFSLTLLFQIVTLPVEFDASRRAI LALEKTHILDESEIPGAKDMLGSAALTYVAATLATALQLLRLFLLFGNRSRRD >gi|229269867|gb|GG666044.1| GENE 374 396409 - 397047 637 212 aa, chain - ## HITS:1 COG:no KEGG:LAC30SC_05355 NR:ns ## KEGG: LAC30SC_05355 # Name: not_defined # Def: hypothetical protein # Organism: L.acidophilus_30SC # Pathway: not_defined # 1 209 23 234 236 131 39.0 2e-29 MEIFTNEFHNKHTYIKINDIKKVSLDDFMALAKEKPLQIGVDSNQIDLIELLKKAGFILK RKCYEVEVSREDLKNPLGPKRFETKLTNKGEMAYEKASNLVFRYYKKTHEQVSPLTVEYE KFKEILPDQAFYYEKNGEMILAAFQENEEIAYLAGFEEKLADDFINDLLIYLFGKYKEIF FEADNTDPLATKLKNKFLEKFDPTFDTYIKYK >gi|229269867|gb|GG666044.1| GENE 375 397104 - 397535 580 143 aa, chain - ## HITS:1 COG:BH2982 KEGG:ns NR:ns ## COG: BH2982 COG2153 # Protein_GI_number: 15615544 # Func_class: R General function prediction only # Function: Predicted acyltransferase # Organism: Bacillus halodurans # 1 139 1 145 155 111 46.0 5e-25 MKIFVKKFGELTTFDLYEILRLRVDVFVVEQACPYQEIDGKDLDAIHIYFKDGGQILAYA RLYEEAGDIHLGRVIAKKRRQGLGSLILKEAIEAAKKCYNTKEIKIEAQTYAKNLYAKAG FVEDSEIFLLDGIEHVKMVLEIK >gi|229269867|gb|GG666044.1| GENE 376 397555 - 398436 702 293 aa, chain - ## HITS:1 COG:CAC2422 KEGG:ns NR:ns ## COG: CAC2422 COG1032 # Protein_GI_number: 15895688 # Func_class: C Energy production and conversion # Function: Fe-S oxidoreductase # Organism: Clostridium acetobutylicum # 1 277 1 277 290 157 33.0 3e-38 MHYTGEVYRPPLEAYTPLLEVTYGCSHNACAFCTMYHNTRFGISPLRHIESDIIEISKTY PMPIERIYLLNGDPFVLPTKRLLEMSNLIHKYLPEVKTITSYASFYNLKNKSVEDMKLLK KAGYNELWFGVETGDPEVLFWINKGADLGDYYEGLDKMKAAGMDYFAIVMQGIKGAGKSY ENALATAEFLNYYPAKGIFIMSTDVQHGSKLYKMRERSEFTETTNRENLEEQITLLENLE VPGDVLYSSGHIVNLVKVTSHMRNKEKMIEKLKDALKSLPDYILDGKNQGRAI >gi|229269867|gb|GG666044.1| GENE 377 398529 - 398876 203 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485626|ref|ZP_03915942.1| ## NR: gi|227485626|ref|ZP_03915942.1| hypothetical protein HMPREF0072_1029 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1029 [Anaerococcus lactolyticus ATCC 51172] # 1 115 1 115 115 150 100.0 3e-35 MDKNYDKKRNLYCLASLLVIAYTVLFIFLGEDFGLGYDFENTFLNPVLLPLSLSLWLIII GIFLRKKYDNLILLFVVIFAAVHVFYIVIGIGFDKTFMDFIKEYLMFLTFGLINL >gi|229269867|gb|GG666044.1| GENE 378 399032 - 399958 1448 308 aa, chain - ## HITS:1 COG:ECs3747 KEGG:ns NR:ns ## COG: ECs3747 COG0549 # Protein_GI_number: 15833001 # Func_class: E Amino acid transport and metabolism # Function: Carbamate kinase # Organism: Escherichia coli O157:H7 # 2 307 3 308 310 340 59.0 3e-93 MKKIVLALGGNALGNSPEEQKKAVAVTAKSIVDLVAEGNQVIISHGNGPQVGMINLAMDT ASKSEAKTAEMPFAECGAMSQGYIGYHLQNAIENELAKREMDQTVVSLVTQVLVDKEDKA FQNPTKPIGSFYSKEEAEKQEAKGFTFKEDAGRGYRRVVPSPKPIDIIEKKAVEKLYNDG MIVVAAGGGGIPVIKEDGKLIGVDAVIDKDFTSAKVAELVGADILVILTAVEKVAIHFGE ENQEWLGHLSVEEAEKYLADGEFAEGSMKPKIEAALSFVKSKEGAKALITSLEKALDGLK GETGTYIG >gi|229269867|gb|GG666044.1| GENE 379 399980 - 401074 1526 364 aa, chain - ## HITS:1 COG:alr4995_2 KEGG:ns NR:ns ## COG: alr4995_2 COG1915 # Protein_GI_number: 17232487 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 16 363 88 423 434 159 29.0 1e-38 MKFEMPKYHHPDFEKDFLKNAPNVTLEEVKVDGLSPRNYHALSVYPEYFKINGKWVLAAQ SRMDTVCVANDTPGEESVNIVEFRNLKKGDKVVIGRTEDASEGIYVWTQGFLEGDAHQDT FAFRAGRSRETAFSIDYDNLYEVLKYEKAHKGYVTLIVGAALALDRDSRAALERLVRNGY VNAIFCGTETAAFDLEKGIFGTTWGQEKFEKEQNSTKNLYKTINMARKYGSTKALVESGK VKDGFMKACVEMNVPVVIAGTIRDRLGLPETINNVYDAQNEMRKHARKTSTIIMMGAILY TIATGNMTPSYNVFDGVVRPVYMYTIDIQEFAVNKLSDRGTVTAVSMVTNVQDFIRNVDR ALNN >gi|229269867|gb|GG666044.1| GENE 380 401074 - 402249 1609 391 aa, chain - ## HITS:1 COG:MK0866 KEGG:ns NR:ns ## COG: MK0866 COG1915 # Protein_GI_number: 20094302 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanopyrus kandleri AV19 # 22 330 81 378 412 166 35.0 8e-41 MEFKVPEFVTPDFSEEKFKKAQNISLQEVEKDGVAPDDFYLTRHMPTFYKVDGKWILPEH TSLNCVAVLKDGKIVVEEIRDLKKGEQVVVSEDGKIEDGIFVYNNAFPEDVYSRPGKAVE TSFSEDYDNLFELLQHERDSEDGYIVWVLGPSVVFDYDTRKALNQLAENGYINCLLGGNA MATHDLEGGFLNTALGQNIYTQENQPMGHYNHLDLLNEVRTTGSIKEFIASGNVKDGIIK TLSDMDVPFVLSGSIRDDGPLPEVIGDEDRALTETKKELDKATVIICIATMLHSLSVANM ASSYRIRKDGKISPVYLYCVDVTENVVHKVGAARENLAYVPMVTNVQDFVVNCEKALISP ANKAFAREMEIPEMEYVEADKKADRNEGEIQ >gi|229269867|gb|GG666044.1| GENE 381 402254 - 404785 1119 843 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 839 1 814 815 435 31 1e-120 MDISKYSQSSVEIIKEANKVAIRKNNVEVSDLHIFYAILTLEEKLIRTYFKELKVIYQDV LDDTENALTKLRSAKGISSLYTSRSYQRALLIAEEISRNQFEEKIKTEHLMLALLREADM PTAKLAATHGLTYKNFNELVAKKFNEYLLKGVDQETIINLEKYGTVLTKEAIEGRLDPVI GREEETRTAIRILSRRIKNNPVLIGDAGVGKTAIVEGIVQRIVAGDVPDDLKDKIIFSLD MTSLVAGAKYRGDFEERLKKILEIIKDSKGRIILFIDEIHNIIGSGSASGTMDTANMLKP MLARGDILTIGATTIEEYRKYIEVDKALDRRFQKILIEEPSIETTIAIMRGIKSKYENHH MIKITDPALTEAVKLSKRFLTERKLPDVAIDVIDEACAQVKMARDQKPEELDELHRKIIQ LEMENIALKNEKDSLSNHRSKEKEEKIKELEKELEKKTDLYNKEKERQETIVKLEREIDI IGFEIEEAKDKRDFENLDKFVSLKDNVSEKLKKIENQGEFYPLRTKVGVSEVKDIISKMS GMPKSKLQYDKLDSINIVREKLKEEFVGGDDMIDKIINTYIIAEGGLFERSKPVLSFIVT GPSSSGKSYIAKLLADYLYEGDKSLLSFDMSEFTDKSSITKLIGAPPGYVGYEFGGVLTQ ALRTKPYSVLVFENIENAHFEVQNLVLQIVQDGTIKDNKGRDINLKNSIVVLTMTVEDGD ESAKEKLDVDFGKYVDYVFKLKRLDDDKLDKLISLNFKELEKALAERQINLSYAGGFFDK FGKYAKDEGFDARSLKKLIEQDVYFLICEKNLTSEIKAFSELILDFDGENKFTVKLKEKN NKE >gi|229269867|gb|GG666044.1| GENE 382 404792 - 405967 1555 391 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0363 NR:ns ## KEGG: HMPREF0868_0363 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 11 390 70 450 451 499 67.0 1e-140 MEELEEIRDELKMDKTIKKDVGPEVFIFLAAFLGLFIYMGSIMGGTNMIKTMMLTSYDLL MNVCLYLMAVAVLAGGISAIFSEFGVIALVNRLVSKIMKPIYDLPGASSLGMLNCFMSDN PAILTLAADDNFRKYFKKYQMPALTNLGTSFGMGLITVTSMMALPVDNAMKGALVGLVGA VVGSIISVRLMISRTKKYYGTEEMVETKGAANVPDGYRKVREGSAGARFITAFLDGGKVG VDMGVAIIPGVCLICTIVVMLTNGAGANGYTGEANQGIAILPMIGEKLAFLINPLFGFNS PEAIAVPITALGSAGAAIGIVADMSGRGIVTANDIAVFTSICMCWSGYLSTHIAMMDALE TKEMTGNAILCHTIGGLGAGIAAHLIYMVLG >gi|229269867|gb|GG666044.1| GENE 383 406089 - 407453 796 454 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 4 444 3 441 456 311 38 4e-83 MQAILDIISKLTGWFWGWPILIVLLGGGLLISFRMGFVQIKYLPFVLKQTFGKMFKSDVG GEGSVSPFQAASAALASSIGAANIVVAPSIIFTAGPGAVFWMWIAALIGQGTKFAEIVLG IKYREKNADGEFVGGPSYTFKKGIGGTLGKIMGFLVSFFFMIEILPSITLQTISAVGPLE QLGLSRLVGAVVITILVVLVAYGGIKRIAQVTEKMVPLMAAVYIIAGLLVIIMHIDQVPA AFKEIFVGAFNPRAIGGGVAGAGISALIKAGAARGCYSNEAGMGSAPYAHATAVTDHPCR QGMWGIFEVIADTVIVCTISALVVLTTGLWQNPDMKDIGVERAFNSAFGQIGTAIIAVSL FLFVLSTIIVIVFYAEKQGEYLFGTTVGKIVRFIACAMILLGGFVSFDNAGVFLDATLGL VVFTNMVGMIILSGEIRELVDEFFNDPKFYPGAK >gi|229269867|gb|GG666044.1| GENE 384 407588 - 408580 1476 330 aa, chain - ## HITS:1 COG:VC2508 KEGG:ns NR:ns ## COG: VC2508 COG0078 # Protein_GI_number: 15642504 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Vibrio cholerae # 1 329 1 332 334 412 59.0 1e-115 MAKNFRGKSFLKLLDFSTEDIRYLLDLSKNFKDMKRAGVPHRYLEGKNIAIIFEKTSTRT RCSFEVAGYDLGMGVTYLDPTGSQIGHKESVADTARVLGRMYDGIEFRGFKQEHVEDLAK YSGVPVWNGLTDQWHPTQMLADMLTIEEHFGRLKGLKFVYFGDARNNMANSLMVVCAKLG VDFVACAPKELFPEEWLVKECEKIAAENFSTVTLTEDVDAASKDANVIYTDVWVSMGEPK EEWEKRIKILKPYQVTKEVMANADKEAIFLHCLPSFHDKGTKVGQEIFEKYGMESIEVTD EVFESAQSLVFEEAENRMHTIKAVMYATLC >gi|229269867|gb|GG666044.1| GENE 385 408852 - 410108 963 418 aa, chain + ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 313 406 160 253 257 66 36.0 1e-10 MGKKYVTLQDSFSSSMNESNLISFDIQSDDGKTLPLMHKHSRFLYILEGEGKIKIQDRVY KMAPGTVISILPWQTSEIIEVEKKISYYLLVYNFNLINIYIKSQLNLNKEDVDFIKCLYS NESALYDLEAIEKIEDIFEDIRNEVGVHSLNLIIHTKQKFSTIYLMCKITELLITYMRYV DDSDTFGESIAAKPENIFMYMFLNSSKDISLEVLSKIFLMSESAISQYIKDVTNLGFLDI LHEIRIYKAKFLLIHTSMTLKEIAKAVHYSDPAQLSKVFQSKQSIGTKDFRKLNQLIEGD ATFTFKPEDLKLIDYVNENFASDIDIMEVAKSFDLTPRNINKIFVYFMEQNFYSYLHQVR VHAACDLLVNTDDPIADIAINVGYNSTKTLLRNFLKHVGMTPSEFRSNHQADKKNHTY >gi|229269867|gb|GG666044.1| GENE 386 410169 - 410789 238 206 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 1 205 278 501 563 96 26 1e-39 MLKVENLSFSYDGKVQILKDISFDLNPGEVLGLMAPSGYGKSTLGKLMAGYIKAQRGSVT VDGKDINDLRGFLPVQMVHQAPEKNVNIRWKVEKILNEGWQVDEDVKEKFGIEDSFLKKF PTELSGGELQRVCLARVLGRETKYLIADEVTTMLDSITQAQICHLLIHFAKKHKLGILFI SHNKDLVEVVSDRIIDLKDINKIEKE >gi|229269867|gb|GG666044.1| GENE 387 410783 - 411616 248 277 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 1 262 8 267 329 100 27 1e-19 SIHILIIGDFMNILEIKNLNISFFQYQKGLERRRLDVVRNLELDLKKGEIMAVFGASGSG KSLLAHAILGLLPYNGFYEGEVCYKGKVLDENLLEKVRGKEIFFIPQTINSLNPLLKTAK QARLTLKRSDYKRQEEVYRNFGLGKEVDKMYPFELSGGMARRVLVADAFLSGAELIIADE PTPGMDKKATDEIIAYFKDLKAAGKTSLIISHDINMALALADRIAIFYDGRIIEVSPVEA FSNGGEDLKNPYSRMLIKALPENGLTLLSKEEVEGLC >gi|229269867|gb|GG666044.1| GENE 388 411591 - 412478 814 295 aa, chain - ## HITS:1 COG:MA1912 KEGG:ns NR:ns ## COG: MA1912 COG1173 # Protein_GI_number: 20090761 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Methanosarcina acetivorans str.C2A # 24 294 15 284 285 254 54.0 2e-67 MKLENNLYTKNITRSHSQRVEERGLSLRKKTLLLIFIALAFLSFIFIKGSMINDDTLAVD FANKLKAPSLDHLFGTDASGRDMALRTIKGLSNSIYIGIIGSLSSLLIASIFSLTLSLGN KSIDKMVNFIIDIFLSIPHMMLLILISVSTGRGAKGVILGIALTHWTSLTRLLRGEILEL KNENYIKISKTLGKSKVFIFIHHILPHIAGQMIVGLILLFPHAILHESAISFLGFGLSLS TPSIGIILSESMKYLLQGHWYLAFFPGLLLCLVVYAINLLGENLGRLLDPYSYHR >gi|229269867|gb|GG666044.1| GENE 389 412462 - 413445 628 327 aa, chain - ## HITS:1 COG:MA1913 KEGG:ns NR:ns ## COG: MA1913 COG0601 # Protein_GI_number: 20090762 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Methanosarcina acetivorans str.C2A # 19 325 25 329 330 278 46.0 9e-75 MTKRIVKELFLFLLLILAVSFISFLLLDLSPIDPVASFARAKSIGLSPSQKQELIKQWGL DQPLMIRFFSWVKHLIRGDLGVSNIYGRAVIDIIREGFSRSILLMALAWIFQGLVGIGLG IVSGANAGRLKDKIIKAYAIIFASTPSFWVGILLIIVFSLKLKIFPSSMGSPVGVLKADI TFVDTLKHLVLPALTLILVGVSNLILHTRSKVIDILNSDYVLYAKARGMKKSQILNKFAF KNLVLPGLSLLFTSFSELFSGTVLVENVFNYPGIGNLTVQAGLRGDAPLLLGLVLFSSVF VYLGNRICDILYLVIDPRLRRMDETRK >gi|229269867|gb|GG666044.1| GENE 390 413446 - 415119 2418 557 aa, chain - ## HITS:1 COG:MA1915 KEGG:ns NR:ns ## COG: MA1915 COG0747 # Protein_GI_number: 20090764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Methanosarcina acetivorans str.C2A # 16 555 13 549 553 369 39.0 1e-102 MNKQVKKLFGLMALVFALTACGSGSGEKKEEAKEEVKTESQETGKTEEKTKEKPKDELVL GIGHEPEKGFNPIFESSHSSSMIFHSALLKRDVNLHIENDLADSYKLSVDNKTYTVKLKD GLKFADGSPLTAEDVAFTYNTAKKEAAAGINLERFKEAKVVDDKTIDLVLEKPDISFTST LASLGIVSKNYYNDSYGEKPLSSGPFELVEWKKGQEMIVKPNENYHGPKCPFKKITFLFF KDDDQALATASEGVCDLIRVPYTAKDMKIEGFHPISIKTIDNRGISLPYVPNEGKVTDDK SIAPGSPIGNNVTCDIAIRKALNIAMDRNEIIKDVLNGEATKATSIADNLPWYNEETAEI HDGDIEGAKKMLDEAGWKEGADGIREKDGIKAKFDLYYAYKDRENLAVYFAEKARQIGIE IETKFGDWDFVMPHMYDQAVLFGWGGYDPLDMYYSYSSKYRAYDFYNTNFYSNPKVDEYF DKGLSSGNLDDFYDYFKKAQWDGQTGFSHLGDCPWVWLVNENHVYMVRDGLEIGQTKIEP HSSRFTILDSISNWKWE >gi|229269867|gb|GG666044.1| GENE 391 415318 - 415722 562 134 aa, chain - ## HITS:1 COG:no KEGG:CHY_1174 NR:ns ## KEGG: CHY_1174 # Name: not_defined # Def: hypothetical protein # Organism: C.hydrogenoformans # Pathway: not_defined # 1 134 1 135 141 117 46.0 2e-25 MNVLVIDAQGGGLGKQIVGSIREKHKDLDITCVGTNSHATSAMLKAGASRAATGENALIV NSHKADIIIGPIGILLTNSMCGEITSKMAEAVSVSRAKRILIPFLHDDNVIVGVSDYSMK KLISLALEELEKNI >gi|229269867|gb|GG666044.1| GENE 392 416056 - 416715 940 219 aa, chain - ## HITS:1 COG:lin1022 KEGG:ns NR:ns ## COG: lin1022 COG0569 # Protein_GI_number: 16800091 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Listeria innocua # 8 217 7 217 219 176 41.0 3e-44 MKNKNVLVLGLGRFGSALAKKLFEKGVEVLAVDRDYTKVQRVADQVTYAAQADMTDEEAM RDLGIKNFDIAVIATGSNIEASIEATLLCKDAGITSVVAKATTVTHERILEKIGADKIIF PELDSGERLARVIAGSNLLEFIEFSKEFSLAEVRVHKAWVGKNLLELDFRNKYNLNVVAF ERGGQTIINPGPHTEIEKNDLIVIIGKKDDVEKVSNEEK >gi|229269867|gb|GG666044.1| GENE 393 416725 - 418071 1276 448 aa, chain - ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 7 448 6 445 445 294 41.0 3e-79 MNKSFINKIFNKISLNPPMVLSLGFAILISIGGILLSLPFFTKSGEATALVDSMFVAASA SCVTGLTPVNTLEHWNTYGHVLIITLIQIGGLGVMSLASFIPLILGKKIGMKSRQVLKEQ LNVDSLEGMIVLFKYVLVFTFATEILGAMVLSFKFIPLYGVGTGLWYSIFHSISAFCNAG FDILGDSIYPFRDDLLVNFTLSALVIVGGLGFVVTSELFRRRSFKKMSTHSKLVLSITAF LLILGTLMFLFLESEDGVLQYESLKGSILESFFQSVVARTAGFYSVDLSQIKDSTALMLM GLMFVGGSPGSTAGGIKTTTLGVLFLSTHAVVRGESEPVVFGRHIGTEIVRKALAIFLVS IVIVISVSFMLTITESAPLVDILYETVSALATVGASKGITPHLSCLGKILITFCMYIGRL GPMTMAFAFGMKAKKSLIRYPESLISIG >gi|229269867|gb|GG666044.1| GENE 394 418209 - 419912 2197 567 aa, chain + ## HITS:1 COG:no KEGG:Apre_0119 NR:ns ## KEGG: Apre_0119 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 17 540 19 543 567 429 44.0 1e-118 MKKLLITMAIILGIFIPNFSHADEFKEISIDASIDEKGVGHIDETWKIDETNEDYTERYK TINNLKGLKIEDFNLTAFGKKFEPIEPWDTDLSFEEKAYKKGIIKRGDDEVELCWGISNY ADNAYKLSYKINPLAIGLKDADMVFYTFVGDNFDPEPEKVKVKIKGYKPFKDIKFWAFGL KGAIHEENGEIILESTGDINYTTVMVKFPKGTFATSYRENKNFEDYANQAVKGSKWEENE GRAYKIPLPIWARVLIGLATALGLTGIFSIIRAIKLSFDPKALANADDLPLPKDFKNKYY RGLPYEGHIENLAYLIKQIPIIGSDLGAAYMNAFILKWAMEGHIDLGDSEPRFLQAQAIK IISRPEDMGPIEASLFDMLYKASLRKNDGMLTDSDFSKYLKAKKDDLDNIYDKLEDESIK ALKAEAYIEDYEFEKTFLSSKRTGKELRITNKGLKLYENILGFKSYLRDYGEEGTKSPEE IKNWKNYLIYSILLNVDENFKNFVDENYNGEPYFIYHPYFFTNAGAYSKSINQSYASATG FSNAGFGGQTSVGGGGGSFGGGGGGGR >gi|229269867|gb|GG666044.1| GENE 395 420598 - 420786 184 62 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485646|ref|ZP_03915962.1| ## NR: gi|227485646|ref|ZP_03915962.1| hypothetical protein HMPREF0072_1049 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1049 [Anaerococcus lactolyticus ATCC 51172] # 1 62 1 62 62 117 100.0 3e-25 MTFSLLKKACPKGKLLYPHSAQGAARGCSREGFKGRRVRDPAEGPLGLPFERRGHVNDLN YF >gi|229269867|gb|GG666044.1| GENE 396 420992 - 422518 2175 508 aa, chain - ## HITS:1 COG:FN0470 KEGG:ns NR:ns ## COG: FN0470 COG2978 # Protein_GI_number: 19703805 # Func_class: H Coenzyme transport and metabolism # Function: Putative p-aminobenzoyl-glutamate transporter # Organism: Fusobacterium nucleatum # 1 501 1 502 512 491 55.0 1e-138 MSKNKKTGGILAKIEKIGNALPHPAIIFVIMIAILAVIAQICVSAGLSVSYYDAKAEAET TIEAVSLLNAEGIRYMFSSLVPNFTSFAPLGVVLVAMLGVGVAEDAGFFDAGLKKMLSNV PPMILTGAVVFTGIVSNIASDAGYVVVIPLGAMIFASAGKHPIAGLAAAFAGVSGGFSAN LIFGPTDVMLGGITNEALRAANISYTVDASGNWYFLIVSTFVLTLVASVVTEKIVIPNLG EYKGAYVHEDKPLTDLEKKGLRNAIIGFLVFAIVMAILMVPENAILREANAQGKMTLDAF LGKGLVGAILFMFLIPGYVFGRTTGKFKDSKDLIGAMTKSMESMSGFLVLAFFAAQFVSF FAYTNLGTILSVKGAEFLESIKLTGVPLVILFIILSAFINLFIGSASAKWAIMAPIFVPM FMNMGLSPELSQMAYRIADSSTNIISPLMNYFAMIVIFMQKYDKDRGLGTLISTMLPYSI AFLIFWTILLIIWMLVKIPLGPGAMLFV >gi|229269867|gb|GG666044.1| GENE 397 422747 - 423187 570 146 aa, chain + ## HITS:1 COG:SA2153 KEGG:ns NR:ns ## COG: SA2153 COG3279 # Protein_GI_number: 15927943 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Staphylococcus aureus N315 # 1 146 2 147 147 65 32.0 4e-11 MKVDIIIDGTIDETQVKIFAKEYSKEIETIKDLLADRLIDKLVAFRDKEVFILSHEEIIR IFAQDKSVFIKTKNGTFSSRLTVSELDKRLDKKKFIRISRSDIVNLDFVKKLDLSFTGTI AVELTNGDVAYVSRRNLKEFRRALGL >gi|229269867|gb|GG666044.1| GENE 398 423197 - 423622 361 141 aa, chain + ## HITS:1 COG:no KEGG:Apre_1651 NR:ns ## KEGG: Apre_1651 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 141 1 141 143 93 45.0 3e-18 MKNFKDLLGGFLVGVGIGALIEAVLSMIIKENIVGVSGFVASQAPGYAKIIQCLVYGGFG IVSVLMANIFKNKNRATYLSHSIHFCAMIIYFICAGLYLRWFEYNLSLVISIILFVGVYL LISFACYIYEKNMIGQINKKL >gi|229269867|gb|GG666044.1| GENE 399 423659 - 424276 563 205 aa, chain - ## HITS:1 COG:no KEGG:Apre_0193 NR:ns ## KEGG: Apre_0193 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 175 1 180 210 84 32.0 3e-15 MKALIYKDLTTTKSSIGLMTVIMVAIAFIFNKEGQLSLFPLTFILLPTILLGILFGVDAE SHIDKYLISTGIGKEKIVGSRYSFVWILSIFAFIISLIVGYRVKMPLALYCASVLFFSNF IALVQLPLMYKFGEEKSRMIFVLFYFIIFGSFSYFGANKEKLLDLINFGVSLNKNILALG LLILTILLSFISFKISAGIYKAKEF >gi|229269867|gb|GG666044.1| GENE 400 424257 - 425123 1089 288 aa, chain - ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 1 277 1 281 288 211 41.0 1e-54 MTDAIKIKNLVKSFGNFRLGPVDLGIKKGTITGFIGENGAGKSTTIKLILDVIGRDGGAI EIFGKDIKDLSVDDKYEIGFVFDDLFLPGSMKACEIEKMHSLLYKDHWEKGTFYEFVEKF ALPTNIPIKTFSRGMKMKLGLALAMSHGAEILILDEPTSGLDPVVRDDFLDILLDFIQDE DHTVLISSHILSDLEKIADYIAFIHKGELIFNEEKDGLSEKYGLVSLGDEEFESLDKSAL VGVRKHQFGRECLVRREKMPAGLEMQKPSIEDIMVYMIKEAYNESLDI >gi|229269867|gb|GG666044.1| GENE 401 425116 - 425493 336 125 aa, chain - ## HITS:1 COG:BH0651 KEGG:ns NR:ns ## COG: BH0651 COG1725 # Protein_GI_number: 15613214 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 100 1 100 123 88 52.0 3e-18 MDIKINYSSKDPIYLQIKNQIRDAILDDKLDIDKPLPSIRLLAKELRVSVITTKRAYDEL EKDGLINSVPGKGNFIKSQDPQMVKEKLMVKIEDHIREVIKLCKLGDISKEEILALVDVL EESDD >gi|229269867|gb|GG666044.1| GENE 402 425638 - 426870 1299 410 aa, chain - ## HITS:1 COG:BS_ampS KEGG:ns NR:ns ## COG: BS_ampS COG2309 # Protein_GI_number: 16078509 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase (aminopeptidase T) # Organism: Bacillus subtilis # 3 410 6 410 410 375 46.0 1e-104 MQKRIENFARLAVEFGVNVREGEDVLISSPVESPELARLMTKAAYEKGARKVSINWVDDT LTRLSYEYESQDTLNEVPDWLVEKSRYQIAEKRSNRISIVSEDPDLLKGLDETKISEAVK ARSLKLKDFVKYTMNDIVSWLVISVPSVKWAEKVFPDLKGEEACQRLWEVILDVCRVSDS WEETKKNWEDHLKTLDDKAEFLNSHQFEYVHYKSANGTDLKVKLPKNHIWMSAGSKNAKG DRFIPNMPTEEVFTAPQYDGVDGKLVATKPLVYNGVVINHFEFTFKDGVVIDFDAKEGKD TLKKMLESDEGSKNLGEIALVPYDSPISNSNILFYNTLFDENASCHFALGKAYPTCVEGG ADLDDSEVKSIGINDSLIHEDFMVGDKDLEIIGYKNEKAYPIFKDGNWAF >gi|229269867|gb|GG666044.1| GENE 403 427401 - 429200 2244 599 aa, chain + ## HITS:1 COG:SA1216 KEGG:ns NR:ns ## COG: SA1216 COG1164 # Protein_GI_number: 15926964 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Staphylococcus aureus N315 # 4 595 8 599 604 500 42.0 1e-141 MKKRCDVDPKETWAIEDLYASDEAFYADIEKLAGMASDFKEKYAKLETSEDVYNSLEAYS DIISLTDGLGTFSGISKETDATDDAMAKRDAKFGSEAAKIFANLSFYESALVKVDSKILD EVIKNHPGYAYYLQRVKDKAKYLLDEKTEAALAALAPTFDAPYTNYNDMRYGDMKFENIN HNGKEVVLNHNTFEEFLEGETDTELRRKAFADYHKVLGAYQNADASVYNNLIQNEKIMAD LRGYDSVFHYLLARQDVDFDIYENHIDIIMEKLAPIMRKYATIIRNHYGLDEMTYADLKL SIDPDYEPQVSIEEARDYIVDGLSPLGENYIGYMKQAFADRWIDYSQNIGKRTGAFCSSP YPSHPFIMTTYNHSMSQVMTLAHELGHAGQGILSNANQNALSCDMSMYFVEAPSTANEIT MERYLLKKAKDDREKLWVLSTMIGKTYYHNFVTHYLEAAFQREVYRRVEKGESLSAADFN QIFKEKLEKFWGDAVILNEGAELTWMRQPHYYMGLYSFTYQAGLTIGTAISEKIVHGTEE DRKQWLEVLKLGGSMGPIDLAKAAGVDMTSTKPIEDAIAFIGQIVDQIDELLKKLNMYK >gi|229269867|gb|GG666044.1| GENE 404 429918 - 430550 548 210 aa, chain - ## HITS:1 COG:BH0039 KEGG:ns NR:ns ## COG: BH0039 COG3344 # Protein_GI_number: 15612602 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 5 208 1 204 418 211 52.0 1e-54 MEDKIISQILNPENMHQAKVKVISNKGAAGTDGISVKEIDEYIKANWARIRQEIIERRYK PQPVVRVEIPKPNGGKRKLGIPTVMDRIIQQAIVQVLTPIIDKRFSEASYGFRPGRNCQM AIIKSLEYLNDGFEWVVDIDLEKFFDKVPQDKLMSIVHEHIKAPDTESLIRKYLKAGIMN KGAYEKSEIGTPQGRNLSQLLSNIMLDKPS >gi|229269867|gb|GG666044.1| GENE 405 431417 - 432259 832 280 aa, chain + ## HITS:1 COG:BS_licT KEGG:ns NR:ns ## COG: BS_licT COG3711 # Protein_GI_number: 16080959 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 277 1 274 277 216 44.0 3e-56 MIVGKVINNNVISVIENNVEKIIMGRGIGFKKKKGDIVEENKIEKIFIIENEFNAIKFKE LMANIPMDCMLIADDIIIHAKKILKRKFSDLLYINLADHIDAAINRVEEGITIKNLLIID VKRFYPEEFELGKYGLNIINNKFGVSLPEDEAGFIALHIVNAEEKYEDKNEVIKMFEIIH LIEDIVRNEYNVIFDESNVYYFRFLTHLKFFAERLLSKGKYNSEKNLDYDLFDTVIKKYK EANRCVGVIKNVLNDMYGYDISVEEEMYLTLHVQRLISLT >gi|229269867|gb|GG666044.1| GENE 406 432305 - 432853 454 182 aa, chain + ## HITS:1 COG:lin0026_3 KEGG:ns NR:ns ## COG: lin0026_3 COG2190 # Protein_GI_number: 16799105 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Listeria innocua # 32 176 5 149 151 159 48.0 2e-39 MTYSKQVENSLNKMMFWKKKYKKDDKKCSVKIYSPIEGEVVQLENVNDEAFSSGILGRGI AIIPNIGKIVSPVNGIISMVFETNHAIAITSNEGIEILIHIGIDTVELKGRGFKSHIKKG DLVKVGQLLMDVDIDFIKSNGYDITSPIVITNDNDSMKITETNANFVRFENEILSLDYDN ES >gi|229269867|gb|GG666044.1| GENE 407 433355 - 434950 972 531 aa, chain + ## HITS:1 COG:CAC3425_1 KEGG:ns NR:ns ## COG: CAC3425_1 COG1263 # Protein_GI_number: 15896666 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Clostridium acetobutylicum # 1 418 1 416 440 269 37.0 1e-71 MKEKLISKMQAFSKAIVVPVLYLPAIGLILVICNFITNPTIADALPFLKFGPIQVLFKVL YSGLISVFNNLGPIFAIGVAFGFAKKKKEHAALISFLCLFIFCAIQNAYLTEHNLLHEAV GNGQNMMLGFQIVDMGVFLGILIGCIVGALFNKYYDKDLGEVLSVYGGTKFVFLISIPIM LILAISFVYIWPPIQGVITNIATFISTSGGIGYFTFGFLERLLIPTGLHHILGSSVWYTD LGGVATVAGKQYVGSWAIALAELSDPGTAKLSLYTIFNNVTLCKVFGLTGAGLAMLSCAD KSMKNKAKGIYIPAILSSCLAAITEPIEFTFLFVSPLLFLIHSFLTGIFFYLLYFFKITC CTAGGIFETLLYNVPAGIAKTGWPYFIILGLVQMATYFVVFRWFILKFDVKIPGRDGTED VKLITKKEYISKKETSHENSDNHRYGIGEKIYQAIGGIANIQSIDNCFTRLRVNLNDINN IDEEMLKETGSKGVIKRGSEVQIIYGTNVHKFRDALEEYMEKNNLRIKGEE >gi|229269867|gb|GG666044.1| GENE 408 434952 - 436274 1228 440 aa, chain + ## HITS:1 COG:CAC0533 KEGG:ns NR:ns ## COG: CAC0533 COG1486 # Protein_GI_number: 15893823 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases # Organism: Clostridium acetobutylicum # 6 439 6 440 441 428 48.0 1e-119 MEPKIITIVGGGSTYTPGVVKAILSKKDTFHVKEIRAYDIDYQRQEDVSIIVRKVIENDC PECKFITTTDPETAFKDSDFIFAQIRVGKYKMREMDEKISLKYGAVGQETCGCGGLTYGL RTIYPMVEILDYVAKYANPNHWILNYSNPAAIVALALKKIRPNARIINICDMPVAIVNSF ADILNCNPKDIKPFYFGLNHFGWFTDVWVNGESRFKELLDHAMKSGYLCETPDEQHWEPS WVETYKNVKPMINRFPDYLPNTYLEYYLLSQDIVDHSNKNYTRANEVIDGREKTLFDAIN QYKETGKYDDKTFVVGAHATFIVDLAESLCKENGGRYLLIVENNGAVANLPDDAMVEIPC YVSPKGIEKTSVGHIPTFYKGLIEQQYASEKCIVEGAIEHSYTKVLQGFALNKTIKSSTQ AKEILDEMIEANKEYWPELR >gi|229269867|gb|GG666044.1| GENE 409 436523 - 436999 483 158 aa, chain - ## HITS:1 COG:CAC2475 KEGG:ns NR:ns ## COG: CAC2475 COG3467 # Protein_GI_number: 15895740 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Clostridium acetobutylicum # 1 153 1 151 154 92 34.0 4e-19 MFRKIRKVKNELSPERTREILHKAARGVLSLHGDDGYPYGLPLNYVYDEENQSLYFHGTK TGYKIDCIEKDPKACFTVILEDGLADDGWSKITSSVVAYGLVEEIEDQEFARAAMINLAK KYYPNIELVDENMAAGFKNTKMLAFHISYMTGKKVNER >gi|229269867|gb|GG666044.1| GENE 410 437010 - 438035 1402 341 aa, chain - ## HITS:1 COG:SP0627 KEGG:ns NR:ns ## COG: SP0627 COG1363 # Protein_GI_number: 15900534 # Func_class: G Carbohydrate transport and metabolism # Function: Cellulase M and related proteins # Organism: Streptococcus pneumoniae TIGR4 # 3 324 1 324 345 292 46.0 6e-79 MEISTITEYIKNLVNTPSPTGFTKFAEEYLMDEFKKLGYAPYQNNKGNVIVPINEMEGEN GLLLSAHIDTLGLMVRSIKANGALRVTTLGGFPLNFVEFENVKIHTRSGEEYTGVVRLNN PAVHGSSDPREAKRDDTTMEVVIDAITHSKEETEKLGISNGDFIFLDPRFRIDNGFVKSR HLDDKASAGILLALAKEIKEKKIKINRPLYMMFTIYEEVGHGAASGHPKGIRDMVAVDMG VVHDDLTCDELKVSICAKDSSGPYNYDLTNELVTIAKDLDLDYGLDIYPFYGSDASAAVA SDYDYRHALVGCGVAASHGYERTHEKAIKSLFDLLVNLVDK >gi|229269867|gb|GG666044.1| GENE 411 438112 - 438627 601 171 aa, chain + ## HITS:1 COG:SP1384 KEGG:ns NR:ns ## COG: SP1384 COG4894 # Protein_GI_number: 15901238 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 161 5 164 165 71 27.0 7e-13 MKRYIFKEKFLKITDKYWIKDEDGSNAFYLDQDFTFIGYRATVFGPDKERLFRIEKKIIS LLPKFFVDFEDGSKMTVNQRFTLLRKSIDVDTDFGTINLKGSIFDYDFTITLNGEKIGEV NRKFISLTDHYVLTVLNEDYTLAMIALVICLNKIHDDEASAAAASAAGGGE >gi|229269867|gb|GG666044.1| GENE 412 438627 - 439091 548 154 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485664|ref|ZP_03915980.1| ## NR: gi|227485664|ref|ZP_03915980.1| hypothetical protein HMPREF0072_1067 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1067 [Anaerococcus lactolyticus ATCC 51172] # 1 154 1 154 154 261 100.0 1e-68 MAKFILILAGLFTLGGLYNLYLFGQIKEKVKFTSTDLAVLGMIAGMYIVYDLVFKPYIIN VLALSLSMIFWNYTAIIARGFSDKCVFTNKLNPFINKKVPLEEIRSVTLSRANKNLLLMV YFKTANSQDNMSFIFAKEKELVKILKNQKVNVIN >gi|229269867|gb|GG666044.1| GENE 413 439228 - 439950 763 240 aa, chain - ## HITS:1 COG:CAC0187 KEGG:ns NR:ns ## COG: CAC0187 COG0363 # Protein_GI_number: 15893480 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Clostridium acetobutylicum # 1 237 1 237 241 180 41.0 2e-45 MKVIVCKDYDDMSKKASDLVISNMMEKPQIKFGFATGSSPIGLYKNLIAAQEEGEISFKY SKSVNLDEYVGIDPNNSQSYSYFMHKNLFDHVAIKEENIHLPKAPEADEKYAIAYRKELE EFGQRDIQILGLGVNGHIAFNEPAKKLNKYASIVELDKSTIEANSRFFENEDEVPKHALS MGLAEIFDARMIIVLANGKNKHEAVKRLLNDDKISTDLPCGLLNLHPNVYLFVDEEAYNG >gi|229269867|gb|GG666044.1| GENE 414 440352 - 440945 918 197 aa, chain - ## HITS:1 COG:CAC2575 KEGG:ns NR:ns ## COG: CAC2575 COG1592 # Protein_GI_number: 15895835 # Func_class: C Energy production and conversion # Function: Rubrerythrin # Organism: Clostridium acetobutylicum # 1 197 1 195 195 194 53.0 9e-50 MAELKGTKTAQNLITSFVGESQAKMRYTYAAKTAEKEGYRQIAAIFRETAMNEGEHAARF YKFLREEFKLETIELTEGYTAWPVIWHDTLTNLQGAIDGENEECEDMYPAFADVAEKEGF DEIARAFRNIAKAEGAHRDRYQKLHDNIENGTVFEKEESVIWKCGNCGFLYEGKKAPKIC PACHHPQEWFEVAAFNY >gi|229269867|gb|GG666044.1| GENE 415 441293 - 442564 1679 423 aa, chain + ## HITS:1 COG:BH3343 KEGG:ns NR:ns ## COG: BH3343 COG0166 # Protein_GI_number: 15615905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Bacillus halodurans # 13 423 21 438 450 509 60.0 1e-144 MKVNFSNVNLENIDKYEEKALAAFDTLMGRNGEGNDFLGWIDRPVDYDKDEFERIKKAAT RIRENSDVLVSIGIGGSYLGIKAVDVACDSYFNSERKTKIIYAGHQLSGEYLVELLDYLK DKDYSLNVISKSGTTTEPAIAFRVLKEALEEKYGKEEAKNRIFATTDKAKGALKELANAE GYESFIVPDDIGGRFSVISAVGLLPLAVAGINIDEFMAGFADGREKYTNKSMENDAIKYA AVRNMLHEDGKDIEILLNYEPKLKYVAEWWKQLYGESEGKDGKGLFPASVSNTTDLHSMG QMIQDGVRNIFETVIEVENPSKDLTIKEDEQNLDGLNFLAGKTMSYINKQAMEGTAMAHV EGNVPNIRIKIDKINERNLAELFYFFEIAVGVSGYMLGVNPFNQPGVEAYKKAMFKLLGK PGY >gi|229269867|gb|GG666044.1| GENE 416 442712 - 442864 136 50 aa, chain - ## HITS:1 COG:no KEGG:HS_0660 NR:ns ## KEGG: HS_0660 # Name: not_defined # Def: hypothetical protein # Organism: H.somnus # Pathway: not_defined # 4 50 82 128 128 72 74.0 7e-12 MKAHKFYAGKIGSGILYLIFVWTFIPAFVALIELIAALLKPADANGNIIV >gi|229269867|gb|GG666044.1| GENE 417 442891 - 443784 689 297 aa, chain - ## HITS:1 COG:SP1240 KEGG:ns NR:ns ## COG: SP1240 COG1266 # Protein_GI_number: 15901101 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Streptococcus pneumoniae TIGR4 # 63 294 80 314 317 107 36.0 3e-23 MIANRSIKQTETARNINPVIITVILSLLVIIPQYVLGIIIKLRQNIEPIDKFFTVIDKEN LSFLLIIYATALTLILAYIFARKILKRNNLSLGLVDENKIINYGKGILLGFFFLTIVVLI LKVTGFAEIRKNPAGFNIKIFLLFVPAWMLQGFEEEFLLRAILMNQMSAFGKIGLAIIAN SLIFSILHLGNAGISVMSFINIFLLGLVFSLIFYLKGSIYMAGATHSIWNMTMANIYGIT VSGNKSVGVTYFTTNLKGPDLISGGGFGVEGSIITTIVLGILLIILSRKAKKKSCGS >gi|229269867|gb|GG666044.1| GENE 418 443781 - 444401 765 206 aa, chain - ## HITS:1 COG:no KEGG:Apre_1660 NR:ns ## KEGG: Apre_1660 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 39 203 41 201 204 119 42.0 9e-26 MDRRKRSENKEYKNPKTRERKKRVREKRRKRRTFGPYILIFILLSASIFFGVRSLSHNVE RTVARIEKAIKTDDTAFMEANMDRLDVIFEVLKKSYSDDEEKQDEFVRNNFKNLDIKFLN KLDIDGGVEVTLKISNVNYVTCFDKIKHLEEANQHEAYMRELSKDGAEVKSTDAKIFLKK KLFGYEIFESRDFINGIIGGALDLVK >gi|229269867|gb|GG666044.1| GENE 419 444458 - 445315 800 285 aa, chain + ## HITS:1 COG:no KEGG:Apre_1661 NR:ns ## KEGG: Apre_1661 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 284 3 284 284 127 35.0 4e-28 MKYVKNNLAAGLTILALICLVFKAFIATSLSTDENLITRALTSYIIAYLAFKISFIETKK VAIMFAPLIIHSLLVALVVRGGFSAKIPSDLIQIITSLYKLMVMVGVFFILELIFNKLVG SLATSIIGAFSLGLYLLIIFSKRLYNLEPFEDFFLYFSFYVMAIRLRSASRLNPALLILA IIMLIGEVYLKEFYLKFDYGFLLTIFPLAYLILKTVTQEATMGFLDYQIFTLVYIYPAIF VIIKLGFDIESLAISIIAILASYIISEIIYKIKNKYLSYLLLGIN >gi|229269867|gb|GG666044.1| GENE 420 445344 - 445505 78 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRYIKIFIITLIVTVIMEFLSKFLLKKYGTDKTLSIIKTIAVVAIAMFLKEII >gi|229269867|gb|GG666044.1| GENE 421 445611 - 446264 908 217 aa, chain - ## HITS:1 COG:no KEGG:Apre_0090 NR:ns ## KEGG: Apre_0090 # Name: not_defined # Def: redoxin domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 215 1 227 231 157 43.0 3e-37 MKNKIIFALMLAGVLAGCGKKEEAKTKEDVAQEAISQAELPEGAKITKDTTTPIEEPKVE GEKPNTLGKFEAKDQDGKKFTNEDFKNYDATVINLWFTGCSACIDEMPELNKIADDFKKD KKVNFLTLCTDAQYDQSTMDAFKRIVGENKPTYQALGVKNDGEIKKYLDHVFAYPTTIVV DKNGNIVGEDVVGAITGEDQLAKLKANIDLAKKASNK >gi|229269867|gb|GG666044.1| GENE 422 446254 - 446874 433 206 aa, chain - ## HITS:1 COG:MJ0749 KEGG:ns NR:ns ## COG: MJ0749 COG0348 # Protein_GI_number: 15668930 # Func_class: C Energy production and conversion # Function: Polyferredoxin # Organism: Methanococcus jannaschii # 6 203 77 246 246 85 30.0 5e-17 MFFGVVFGRLICGFLCPFGFFQDLLHKIPSKKFSTKKLKVLRYIKYIILTGILVGIGFAL KGKFEVVPPYFCKYLCPQGIMEAAIPLAARNISLRAALGPLFRFKFVILVLTIILSIGFF RPFCKWICPLGAFYSLFNKYSIYQLKLNEDKCISCGKCARVCKMDVDIRQSTTHLECIRC GDCVKACPTKAIISEFIRKKGEENEK >gi|229269867|gb|GG666044.1| GENE 423 447110 - 447244 56 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485675|ref|ZP_03915991.1| ## NR: gi|227485675|ref|ZP_03915991.1| hypothetical protein HMPREF0072_1078 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1078 [Anaerococcus lactolyticus ATCC 51172] # 1 44 8 51 51 75 100.0 2e-12 MRKRKTYLLLALSLAFIGLGIYRKEVDTVFMKAINLCLECIGIG >gi|229269867|gb|GG666044.1| GENE 424 447321 - 448361 820 346 aa, chain - ## HITS:1 COG:alr1192 KEGG:ns NR:ns ## COG: alr1192 COG0642 # Protein_GI_number: 17228687 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 51 344 168 472 472 121 28.0 2e-27 MLLASMYLINRKQAMVIDAVIEDINENMSSMDRSMVLFVDSSKLQSLSDFTVYLILVMST VIILGSLSFAFIIKKILAPLKKFQKKLGEVDIDRPESFENLVILDNTSSEIVELSQTFDK MLKKIYADYKRQKDFSSNVAHELRTPIAVMKSQLDVFRQKTDDEDARKMLRVLDSNVSKL NGLVDAILSLRKKSKLKFVDVNLDILVDEIILDLEDKAEENGIDLIVKDTNISLVTDDGL LQRLVFNIVENAIKYNNPGGKVEISAKQVKDMVQIIVADTGVGISQADKERIFELFYQID SSRGQEGFGIGLSLSKTIANMLGATIEITDNEPKGSIFTVKIPKSL >gi|229269867|gb|GG666044.1| GENE 425 448411 - 449091 960 226 aa, chain - ## HITS:1 COG:CAC0653 KEGG:ns NR:ns ## COG: CAC0653 COG0745 # Protein_GI_number: 15893941 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 220 1 220 221 174 43.0 1e-43 MKVLIVEDELDLLDSIAEGLTLMGYVTDKASNGDDAIDMAFVESYDLIILDVNLPGKDGF EVLRSIRQFNKEIAIIMLTARSDIEDRVKGLDLGASDYMVKPFALKELDARMRSHLRGKK IHQSTVINMSGLSFDTIKREASYGGKIIPLTVKETGILEYLFLNSERFISAEELIEHVWD SNADGFSNTVRVHMSSLRKKLRSACGKNLIENVIGKGYRIHETENL >gi|229269867|gb|GG666044.1| GENE 426 449323 - 449943 752 206 aa, chain + ## HITS:1 COG:no KEGG:Apre_0084 NR:ns ## KEGG: Apre_0084 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 204 1 205 208 85 37.0 1e-15 MKSKKLILILATTLVLGACGNQAVKPKEETKQEESQTTENKGVKEVKNTKKDADENSLID PDRDPIPQVPTNPEEAVKIFHEHKFGDGTVGSINISKLKLTFFNEALDYEIEGFKDGKEY KLKIADNGKIVEEEIDEDDDTNKLALDFNKIIPATEAMEKALKGQAENAWVVEYELEIDD GRAVYDIDIENGDDVKIDAATGEIIK >gi|229269867|gb|GG666044.1| GENE 427 450095 - 450682 858 195 aa, chain + ## HITS:1 COG:no KEGG:Apre_0084 NR:ns ## KEGG: Apre_0084 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 194 1 205 208 76 33.0 7e-13 MNKKLLALLLASTFVFAGCNQNKTENKEETKQEEKADTPTEEGKEEAKNENNKESEAEIV LPNNKVTLKAASYKFESHVGGAPYKLTEVTYEEENGEAFYTFEGEKNGDEYKLKVNANTA ETSDAEKEKKDDKENPVDLGKSIPPEEAMNIALKSNGGGKIKEWKLINDGDGEKYEIELE DGKEIKINAINKKIL >gi|229269867|gb|GG666044.1| GENE 428 450885 - 453851 2984 988 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0283 NR:ns ## KEGG: HMPREF0868_0283 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 159 851 36 756 1160 278 32.0 1e-72 MKNKYRLALCLALSGAVLAGTTKGGVISYDSSSIISYASQNRIKRSTGGTFQRVYMDKDF LESIKSVKVNDETYIKTEKSNSFQTKLYYLRIYEDGNEYSIQFYGLQAGDKVTLETDTVS LKFKIKDPQGFSGIIDPNTISEEPINKGGAKPDPGQKQPDGQAGTEDASKYIKKIETSLR TTTIRMDDDFVKSIESIEVNGKKWKEKSGSGISDKGLYYLNKGDDADGCGVKFAKFAEGD RVVIKTKDKELSFTVANPSDSASFIEKGSLKVKNISAKTQPDPAGKEDEPGKSQGESPEE KDISFVYASSPFKNTIKLSKGKFEKSKLEKLIINGVVQTEISSPSGTFGRDKYAFSEDGE LCIRALGKNHTLSITYAGKEYNYIYDGNKLVENKDKKEINYKIKLHGEFDSLLVGQKKID GYTGGSVSISNNPNSVSVKYTDKDEPKKEDWKKLDGKGSEFTNIKAVISDPESGIVPTFN YGSISLNGDVNKEGTFQIWLEATDVFGKKIISNKVDCHVYKEGKDKLEDLLITDNFRQTK DGKYMWDMRPWRVTKFNDSGKEVNVPKGLKAWFGSHKKDVYGELGFETLEEPSQTLVVGE GANLTFKNMKIFGSVKIIVKDGGVLNLDNSVVFGKIEVSNGGKINVNYNPYNNKITDGAS ISGQIVLKDGAILGKSSIYSNTNWLGQGKLVNTNDKPVIKVEGKAKIEGEVYVRGDHAAT HSKHGQPALEVGPNGEVEIGEKSSLYLYGGGINHLTEVGGDALILKGGKITGKGKLVAVA GEGIERQGGNGVSGTGTISVAKAYIRGGNGKKPGKALGSDKIKFDETKGLTIDGKVPTTY DQPVPEDYWHNTFRPLEKVINKINSALEENKDKPIKSSPADKKETNPVAPSGNKKPAGKQ RTHSTYGTSQGGSTKDSSQKRDLKKYIDQLKEAMMENKIAIKSAKFLLENAPKQVAPVRD KLIKLVENANNIIEKSQNILKKLGEIED >gi|229269867|gb|GG666044.1| GENE 429 454342 - 455076 381 244 aa, chain - ## HITS:1 COG:BH0227 KEGG:ns NR:ns ## COG: BH0227 COG4821 # Protein_GI_number: 15612790 # Func_class: R General function prediction only # Function: Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain # Organism: Bacillus halodurans # 4 240 5 240 250 165 40.0 7e-41 MFEYIDRIKEILNEVESKEKENIVKASNMMVDAILNKQNIYIFGASHAGILTQEMFYRAG GLITINPIFGKELSLSNEPITITSNMERLQGYGKILANTRKISKDDILILHSVSGRNPVT VELGLTAKEKGAKIISITNLAYSKSTKSRDKSGKLLYEISDLVIDNHGSIGDAEIEIKDG LKVSPTSTVIGASILNTVISLIAMSLEDKSVDVLPFFYSANLDGGDELNLQILSKYEEQI DYKY >gi|229269867|gb|GG666044.1| GENE 430 455093 - 456349 1144 418 aa, chain - ## HITS:1 COG:YPO2782 KEGG:ns NR:ns ## COG: YPO2782 COG3037 # Protein_GI_number: 16122986 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Yersinia pestis # 3 376 6 383 418 213 36.0 5e-55 MNFITDYILKNPPVLLGLISILGLIVQGKKIDEVIKGGLTAAFGMVILSKGVDMLVGSIV PINSAFQETLSSGAINEGLNDVSFTDTYGGSVGLSMFLGLALHLLIARFTRVKTIFLTGH MIWWFPFIFVAAGVEGGLSGISLIIFGAISSALYWSYMPWIMRKYVWAATEDESFLIGHP TGILSLISGFVASKVGDKSKSTEDINVPKSLSFFREISITGGIMMVIMYLVTGIITPNLV SEGENLVMVAIGNGLSFGAGLLIMLYGVRMLINQIIPAFQGISEKIIPNAIPAFDCPILF NYRPNAVIIGFIIAMIVSTVLIVISNIYSIFGVILVPLVITSFFECGAAAVIGEGQGGLR GSIIGTAVAAVVMVFIMGISVKFFSNTIQNWLLIFGGNDFSFFGPIARFLSTLLSNVF >gi|229269867|gb|GG666044.1| GENE 431 456359 - 456634 372 91 aa, chain - ## HITS:1 COG:BH0222 KEGG:ns NR:ns ## COG: BH0222 COG3414 # Protein_GI_number: 15612785 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Bacillus halodurans # 1 90 1 89 89 77 50.0 4e-15 MKILAVCGFGVGSSMVLKMTIEKVCKELNLEANVDNLDLSSAKAESADFILTSNELADEL RKSKNIPIYPIKKYMDKEEVKNAIEDYLSTL >gi|229269867|gb|GG666044.1| GENE 432 456636 - 457073 487 145 aa, chain - ## HITS:1 COG:BH0220_2 KEGG:ns NR:ns ## COG: BH0220_2 COG1762 # Protein_GI_number: 15612783 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Bacillus halodurans # 6 124 3 124 145 100 39.0 7e-22 MKLVDLLNENTIQIKDNADDWIDAINIGVGPLLKGGYITEEYVQSMISAVNEYGPYMVLA DDFALMHARPGISVNKIGLSMLILKKPVNLKGKSVRVFLFLAALDNKSHIEYLMKITKIL SDNQKFNIIKKGNKNEIINVIKGGD >gi|229269867|gb|GG666044.1| GENE 433 457074 - 458864 958 596 aa, chain - ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 438 1 469 499 101 24.0 4e-21 MLGDREIEILDVLINAEDVKSNDLSTKFNVSNRTILRDLRKISNFLEKYGDKINSSKDGY KLISTDKNKLKSIIRIIKLKQYNDIYKQLFLFIVEHDNIKVSDLALKFYLSESSIKQKLN MLKKKIDKYNIKLLMVSGKIYIDGLEKDIRNYLVDNYMVVKNNILYHTLLELSGIPSIDI IKKLISKELIDRSITISDYDYSKLISLILVSYYRAEYSIYLSQSYINPIILDINKKLAIE HKIQLSKKDCAYITENSIFNKYMYDDLDYKINKIVDEALSKICKTSSNIYSFDDEFIKAI NFHLKILIHRMELNDKIKNPLVNEIKRKFILEMNDAMIIKDMIYEHFNIQIDEDEVSYLA IYLMSSKISSKDKKNVIIICNFGIGVSQIVKMKIEQQYKNLNIIGVYPLSNLDLAISKNP DYIISTVNIDVDTKGIPVVDGTKVIYSNEPLVFAERSIKDILNKNLFFDIDVASKEEFFN VSQKLILKNNSEMTDKKLDVVENYDYSVSTDIGNLVAIPHAVLEGDFKSFVAIFRLKNQI IWNKENVKFVFLIVINKKEKFYIDELKYLYNYILDPSNLSFMINASNYDEFVERIL >gi|229269867|gb|GG666044.1| GENE 434 459202 - 459615 504 137 aa, chain - ## HITS:1 COG:no KEGG:EUBELI_01105 NR:ns ## KEGG: EUBELI_01105 # Name: not_defined # Def: hypothetical protein # Organism: E.eligens # Pathway: not_defined # 22 137 26 139 142 119 54.0 5e-26 MKKIIKIIALILILTACSSQGKVKNPATQEYKAGTGNIQGNVDVEKYLEIDQRFDIGADK NGMAVFKDPHKAYQALTEKYSDGIKLIQKEFDLEDLSETSYEDYKTYGWQVETGTPEEKN QAKFVTGFFDIYENSFE >gi|229269867|gb|GG666044.1| GENE 435 459805 - 461058 1895 417 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 401 1 405 405 529 61.0 1e-150 MYTVRKVTDDLYYVGGDDRRLALFENIFPIPEGVSYNSYLLMDEKTVLVDAVDWAITREY MVNVARVLNGRDLDYLIVHHMEPDHCSSIELMLQRYPNLKIISSEKGIMFMRQFGYHVDD RYIEVKEGDTVSFGKHEFTFVEAPMVHWPEVLMSYDSYDKVLFSADAFGSFIANNGRLFA DEVNWDRDYLDEGRRYYTNIVGKYGTFVQKALEKAGGLDLKYICPLHGLVWRDNFGYIID KYVHWATYEPEEEGVLIVYASMYGNTEFAAQALASKLCERGMTNISLRDVSSTHVSTLIA ESFKYSNIVLASVTYNLGIYPVMLNYLEDMKALNLQNRAVSIIGNGTWAPQAAEKMEKFL DEEMRLMDVLPEGLDMVSSLKKAKEPDMDAMVDGIFDSMKKRREEKEKTASQNKGKK >gi|229269867|gb|GG666044.1| GENE 436 461072 - 462997 2482 641 aa, chain - ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 376 1 376 377 547 75.0 1e-155 MLFKTTEQHEELRKKVRAFAEEKVKPIAFELDQKNEFPDDIVKEMGELGLMGIPYPKEYG GAGLDVISYAITVEELSRVDGGVGVICSAHTSLGSWPIFAFGTEEQKQKYLVPLAKGEKI GAFGLTEENAGSDAGGTETTAVLNGDHYILNGKKIFITNAPKADTYVVFAVTTPGIGTHG ISAFIVEKEFEGFTFSDHYDKLGIRSSSTAELHFDNVKVPKENLLGKEGQGFAIAMATLD GGRIGIASQALGIGQGAYESALAYAKEREQFGMPIAHLQRNTFKLADMATYLRGARLMIY SAAELKENHERYSAEAAMAKQVASDLAMKITTEAVQLYGGSGFIKGVDVERFFRDAKITQ IYEGTNEIMRVVVGAHTVGRAPKMQRAGSKGSAAPIAGVRKGEIFEGDPKEAVKNLVAAL KKDGYDFTVGIDPMTPIAEASRVVVAGRGIGEKKNMKLIEELAHQAGAAISSSRPVAETL KYVPLDRYIGMSGQSFKGNLYIGVGVSGAGQHLKGMKDASTIVAINNSKNAHIFNNCDYG IVGDAMEILPLLIKELDNGQEKKPAPAQPKIKRSKPRKMAPKEDIYVDLGSGYEYDPKVG DPTQGIEPGTPFDKLPDSWVSPVSGEAKEEFIKMEFPADRK >gi|229269867|gb|GG666044.1| GENE 437 463406 - 464017 949 203 aa, chain + ## HITS:1 COG:no KEGG:FMG_0084 NR:ns ## KEGG: FMG_0084 # Name: not_defined # Def: N-acetylmuramoyl-L-alanine amidase # Organism: F.magna # Pathway: not_defined # 76 203 310 437 437 99 41.0 9e-20 MKNKLLKPVILSLLALSLVGCDGKQMGLTDKNAENQIVEADEDMNKENKPAEDNIDKSKL ENTEDKKENSDKDKKESEDKNLHTKDGKYVTTLIAKLKGEADDYITSTAYAYKIEDDKLV ISGSFDYHEDPDNYEKVEEIKNEEDHKFVINDKTEFQAVGGMAPAQKFTKEDFLKYLEEC KDTGLALIIYVEDGIAKTVEISS >gi|229269867|gb|GG666044.1| GENE 438 464222 - 464401 147 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485690|ref|ZP_03916006.1| ## NR: gi|227485690|ref|ZP_03916006.1| hypothetical protein HMPREF0072_1093 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1093 [Anaerococcus lactolyticus ATCC 51172] # 1 59 1 59 59 99 100.0 1e-19 MFDYKENDFSSFKMLFTQLGCAVGAYSSLVLKDKIILVFLACLGAGFLLGTYLDKKKVC >gi|229269867|gb|GG666044.1| GENE 439 466128 - 466988 1065 286 aa, chain - ## HITS:1 COG:SP1721 KEGG:ns NR:ns ## COG: SP1721 COG1940 # Protein_GI_number: 15901554 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Streptococcus pneumoniae TIGR4 # 1 285 4 293 295 270 44.0 2e-72 MFGVLEAGGTKMICAVGNRNLEILDQVRIATRRPEETFDEIKEFFAKYKTDIESIAIGSF GPIEVNPDSDDYGKILNTPKEGWKDFNIIKCLEEDFSVPIYVTTDVNASAYGEYKVGCGE GKASLAYYTVGTGVGGGFVQNNNFLGGASHPEMGHMIIKKDPRDTYEGGCMCHGDCLEGL ASGPNIEKRLGKSGQDLEPNDEFWDIEAGYLAQAVYNTSLMFSPDVIVFGGGVMQVEGLI EKVREKFKELMNGYIEIKELESYIVRPKYDGKSATYGLLILAQEIL >gi|229269867|gb|GG666044.1| GENE 440 467289 - 468428 1844 379 aa, chain + ## HITS:1 COG:no KEGG:Clos_2845 NR:ns ## KEGG: Clos_2845 # Name: not_defined # Def: peptidoglycan binding domain-containing protein # Organism: A.oremlandii # Pathway: not_defined # 26 377 406 758 762 184 39.0 8e-45 MKNKFKLTALLVALSLGFAGCAQNAGKKVDDAAKDAKEKVEEAVEDTKDKAEDVKDEAKD KASDALDKAKSTLEGKLVLRRSLRAPHGEGSFARIAVITDGDKIVDAAIDEFQFFDEGSG FLALPNQDSDTEFKSGNKEGKFLGSKLMNDEKYSALMKEKAKATVSIADNFKAIQDFVKG KTIDELKKVVAGAEDGKAIDSVTGATLVDTKGYLEAIIETAEDDENTTVFEANKDDDIQI KQNFGTAGNKNAITDTFVVMEDGKIIAANIDEYQYMEGKGVPNSDKKFGENYADSKKVLA SKLENNEEYSKQMKEIAKASHTLRESLNAIEAYVVGKTPDEIKDLIDGSKPGKPVDAISE ATLSSTVGYLDEIYKTATK >gi|229269867|gb|GG666044.1| GENE 441 468506 - 469867 1070 453 aa, chain - ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 6 447 3 444 468 201 33.0 3e-51 MSEKIENKNRMGTEPIPSLLFKMSLPIIISFLVQSVYNLVDSIFVARLSEKALTAVSLCF PVQNIMVAFAVGTGIGTTALLSRYLGMDDKKRVGVIATHGLILAAASMAAFMLFGIFFTD FYAKSQSTDPEIIQYTKDYLYVILLFCGGVFFQIFFEKTLQSTGNTVYTMITQGTGAILN IILDPIMIFGLFGFPKLGVTGAALATVIGQTGGSLVGVYFHSKKNRDVNFIFRNLSFHMD NIKQIFSIGLPSVLISGIGSVVLFFINNMLYTFGASAVAAYGIMYKLQSFSFMPMFGISN ALLAIVSYNYGAKNKERIREAIKIAFVASFVIVGLSVVLMWIFSKQLFDLFSATDVMREI GVPMIRIVSLSFIISTPSVVGVGGIFQAIGNWKFPVIQSFLRQVILLLPIFYIFTRLGSL NFAWWAFPIAEILNAIVCVIFLRKDIREKIDIL >gi|229269867|gb|GG666044.1| GENE 442 469932 - 471107 1321 391 aa, chain - ## HITS:1 COG:L93420 KEGG:ns NR:ns ## COG: L93420 COG3919 # Protein_GI_number: 15674209 # Func_class: R General function prediction only # Function: Predicted ATP-grasp enzyme # Organism: Lactococcus lactis # 3 384 7 397 408 138 26.0 2e-32 MNFNAIILGTDHNSYSVARSFYEAFDKKPIVAGSAVLVPFYKTRIADVYTEKNFSADDKI FIDTLNKIAKARPEEDFIFFAPTEHYVDLLVRNAKDFDFSYHIPYPNPDMASKLLKKSEF YKILEEIGVSYPKSYVADRENYKNLNLDGELFLKADEYDDFIASDIKIKQKGYHAKDRAE AIKILDNIYDSDYQGHVIVQVFIHGGQGTEYSLNGYRSKDGKVSMVLARNLLSDMRPMWV GNHLVQVDHEDSEMYAIAEKITNSLSYEGLFNFDFKKDSKSGKVYTLEMNIRQGRTFYYS TLAGVNLIKIATEDMVLGKSVSERTKRAFMLTAINKDVARNHVDPSLLGEFDDKKRNENS AIHIINSDDDGIMRNLRVKDALRRQEKELYD >gi|229269867|gb|GG666044.1| GENE 443 471111 - 473033 2324 640 aa, chain - ## HITS:1 COG:CAC2362 KEGG:ns NR:ns ## COG: CAC2362 COG0441 # Protein_GI_number: 15895629 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 634 1 633 637 728 55.0 0 MIKIKLPDDSVKEYEKGVLVGDVTKDISMGLYRAAVGAVVNGKVMGYAEPIEEDSDFRVV KFEDAEGKEIFWHTTSHVMAAAIKELWPETKFAIGPAIADGFYYDMDLEHRFTPEDLEQI EKKMKEIAKKDLKLERIEVSRDEALKMFKEEGQDYKVELIEDLPKDELITLYKIGDAFTD LCRGPHLESTKEIKAIKLKAIAGAYWRGDSDKAMLQRIYGISFPKAKDLEEYEELQKEIA RRDHRKIGKEMDLFAFHEEGPGFPFFHPNGMILMNELLGWWRDVLDHSGYGEIKTPLILN EDLWHRSGHWDHYKENMYFTKIDDEDYAIKPMNCPGSVLTYASRQHSYRDLPIRLAEFGQ VHRHELSGTLHGLFRVRTFTQDDAHVYCLPSQIKEEVYKMIDLADLLYSTFGFKYTMELS TRPDDYMGDIKDWDFAEEQLKLALEERGIDYQINPGDGAFYGPKIDFHLLDAAKREWQCG TIQLDFQLPANFELEYIDENGEKKRPVMLHRALLGSVERFIGVLTEHFAGRFPLWINPRQ VEVIPVADRFADKAHEIAKEIEKAGFRVGVDERSEGVGYKIRSAQMMRTNYMLVVGDKEI ESGLLTVRNRDGEETKDVNLADFIAKISEERDSKSRKSIY >gi|229269867|gb|GG666044.1| GENE 444 473443 - 474468 1161 341 aa, chain + ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 4 338 3 336 339 449 63.0 1e-126 MKNIMITGGAGYIGTHTAVELLNKNYKVVIYDNLSNSSKIAVDRVEEITGKKVSFYEADI LDKDKLKEVLTKEKIDVLIHCAALKSVGESVSKPLEYYHNNLTGTLTTLEAMKEVGCKNL IFSSSATVYGNPASVPITEDFPKGECTNPYGWSKSMMEQIMIDLQKSDPEWKIVLLRYFN PIGAHKSGRIGEDPRGIPNNLLPYIAQVAVGKLDYLRVFGDDYDTVDGTGVRDYIHVVDL AKGHVCAIDKLDELDGVSIINLATGNGYSVLEVVKAFEEASGSKVPYKIVGRREGDIAKC FANAKKAYELLGWKAENGIKEMCEDSWRWQSQNPNGYEERN >gi|229269867|gb|GG666044.1| GENE 445 474392 - 475396 1003 334 aa, chain + ## HITS:1 COG:no KEGG:Apre_1673 NR:ns ## KEGG: Apre_1673 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 27 331 1 304 305 454 75.0 1e-126 MESKRCAKIPGDGNLKILTAMKKGIKMDTTLVVLAAGIGSRYKAGIKQLAKMDTNGYTII DYSIFDAIEAGFNKVVFIIRKDIEKDFKEVIGSRIEKFIKVEYAYQELTLPGDFVSPTTR KKPWGTVHAVLATKGLVNEPFLVINADDYYGKGVFIDLRNFLLKTPAEKEGRLQVAMAGY KLKNTLSDNGTVTRGVSVGNSENKLVNIIETHEIKYNKEDGTFSSKEKLAPDLLNLESLV SMNLWASFPKFIDLAEKHFVTYLEKNKNNLETCEYVLPDMIGEWIKEDLADITIIPTNEK WIGITYREDLEPAQEAFRQMFAENTYPRDIWSEK >gi|229269867|gb|GG666044.1| GENE 446 475546 - 477045 1805 499 aa, chain - ## HITS:1 COG:SP2107 KEGG:ns NR:ns ## COG: SP2107 COG1640 # Protein_GI_number: 15901922 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Streptococcus pneumoniae TIGR4 # 3 466 5 475 505 331 40.0 2e-90 MEKAGILWPLASLNGNHGIGDFGKASYDFIDISKKAGFDMWQILPLNPLGYGNSPYQPYS SYAGDEVYISLDMLYEEGLLDEKVAPFKQEDRVDYNFVRDFKGKYLKKAYEKFKEKGLDK TEAYKEFLKFDFVYDYAVFISFKKDNDLIAWNEWPKEQKSWIIDRKLDLSPYEEQIGYEI FVQYIFYVQWMKLKAYANKNGLKIIGDIPFYVGLDSLDVWQNQKYFEITEEGKPILIAGV PPDAFSDLGQRWGNPIYKWDELEKDDFKFWIDRLAYNAKLYDIVRLDHFRAFDTYWQIDA KNDTAVEGEWICAPGFKLFDKITEELKDVEFIAEDLGTMMPGVYKLRDHYDLKGMVIIQE NLRPWEDHLVDARENSVAYPGTHDNKTLFQWYDELSEAQHESIKKYFKDLGIDHGDIKED FFDFVMGIASDYIIVSLGDILGLGEEARINEPATLNDKNWSYKLKDLKEYAQKADFLKQT IEENKNNPRKQNVEAKIEK >gi|229269867|gb|GG666044.1| GENE 447 477048 - 478082 1230 344 aa, chain - ## HITS:1 COG:YPO0108 KEGG:ns NR:ns ## COG: YPO0108 COG1609 # Protein_GI_number: 16120455 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 2 339 8 338 342 162 29.0 1e-39 MTNPTIKDIANICGVSVSTVSRAINDAEGISPSTRTKILATIKKVGFVPDSNARNLKINK NKTIAVLIKGITNPFFTPMIKVIEEEISKTDYAFVLNKVEEHLSEFDVAKRVAKILKPEG IIFLGGHFVSDSEQLDSLDTPYSMTTIVNKDIINRNAACVGIDDFKESARMVDYLISLGH RKIAFIAARADDLSIGHLRMEGYKKALADHGIDFDEKLVVYPPKGLNPYSLSHGYEAGKK IVKDELGCTAIFAISDLVAIGAIKALADMGKSVPEDISVAGFDGLEINEFLLKPITTMAQ PTDKIAHTSVKELFKIINKRKFKEVTSFDADLFIGETTAEIRKV >gi|229269867|gb|GG666044.1| GENE 448 478471 - 478851 445 126 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485702|ref|ZP_03916018.1| ## NR: gi|227485702|ref|ZP_03916018.1| hypothetical protein HMPREF0072_1105 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1105 [Anaerococcus lactolyticus ATCC 51172] # 1 126 1 126 126 186 100.0 5e-46 MKNKKSLVLLLALGLIFAGCKDEAPKNVSSEKSVVIKSEEQIKDESVTDNFYKLVEDANK DLTDEEKTFLANLLKNIEDKNSEYLSKILAGPLKDQVGGNLRVLTKKLAPVDLAGPILSI RKIKKG >gi|229269867|gb|GG666044.1| GENE 449 478898 - 479335 453 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485703|ref|ZP_03916019.1| ## NR: gi|227485703|ref|ZP_03916019.1| hypothetical protein HMPREF0072_1106 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1106 [Anaerococcus lactolyticus ATCC 51172] # 1 145 1 145 145 227 100.0 3e-58 MAENDKDKLTKLDITLGSTFTKNQELKKDNQAFVDRSYEIIDALKNSDKELSAKDIKGLN LEEKKFDDLYDGLVKDLRMAGKTLTDKSKVKVSFAKDVIKNAPVDQNLVKVGLIYTFEHI EKIVYDFVYTEDINLISLGIIPDEK >gi|229269867|gb|GG666044.1| GENE 450 479605 - 480960 1416 451 aa, chain - ## HITS:1 COG:CAC0460 KEGG:ns NR:ns ## COG: CAC0460 COG1253 # Protein_GI_number: 15893751 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Clostridium acetobutylicum # 2 433 4 440 443 254 34.0 3e-67 MDSVPYHSLILVLIVIFLILINGFFTALHTGVISLSQDKLRDLEEKGSKDAEVLLRITSN QDRLNQSFSMINSVLSLVTVAFIADIIRDTDFIVTNISMKTALIITILFYIVIKIIFVDK IPQRIGVRNPLAFALNTTGTLRLALALTKPFVLVTDKVTNFIMKIFGIEAGVIQKEVTNE QIKSIVQIGEDQGIIRPMESKMIHSIMNFDDIIVEEIMTARTDVFMIDINDKDREYMEEF VKIRHNRIPIFEDDVDNILGVLYTKDYLLEATKVGLFNVDLEKLIRPAYFAPDKIEADKL FSDMQKGHIHMAILIDEYGGFSGVITMEDLIEEIVGDMEDSFDYDIPEIKINSKNVFVVK ASIGIKDLNEKIPINIDEENENYDSLGGFIIDKLGYIPEAGDNETIIYNGYEIKILYMED NRIKACRIRKLKDKPNEGKTEEEPEEKNEEK >gi|229269867|gb|GG666044.1| GENE 451 481028 - 481978 1150 316 aa, chain - ## HITS:1 COG:PH0144 KEGG:ns NR:ns ## COG: PH0144 COG0598 # Protein_GI_number: 14590086 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Pyrococcus horikoshii # 45 313 53 319 323 80 25.0 3e-15 MEYIYKFDTDNGFEETTMPKFYDAIEDDDFYLMYLGKADFIDFAKKYKLDNALVDLLVTE NSKKSYVAVEDTYTFAILELLDIRGNLDTSDLIGFYIENNRLVVVDMYDKDDSTTRAFNK MVAKRFSSRSPGRALKHFITALIDKHTKIFDQIKDSTAQIEDSIINNKSNKDKIGVISDN RHKALNLYTSYERLLDTIEVFVENENEIFDDDDIKHLKSLAYRVERYSANISYLSDYITN VKDSYDSKMDLTMNSTMKILTVVTTIFTPITVLTGWYGMNFENMPELSWEFGYMYIIGLS ILSVIICYLLFKKIDK >gi|229269867|gb|GG666044.1| GENE 452 482051 - 483643 1720 530 aa, chain - ## HITS:1 COG:BH3449 KEGG:ns NR:ns ## COG: BH3449 COG1757 # Protein_GI_number: 15616011 # Func_class: C Energy production and conversion # Function: Na+/H+ antiporter # Organism: Bacillus halodurans # 32 525 3 507 516 283 39.0 8e-76 MKKKNMKLALCVGLVSIILSIYISLTEANTFATAWALFPPVLAIFMALLTKEVYSSLFLG IIVGGILGSGGSLSKSLDNVVEKGLITSVSQTAGIFIFLVVLGIMVVLINHSGGSRAFGE FAHSKIKSRKAAQLSTFFLCSMLFIDDYFNCLTSGSVMKPVTDSYKISRAKLAYIIDSTA APICMIAPISSWSAAVSGYAEGISGIEMFVRSIPFNFYSLLTLVFVVSIILFDNDFGPMK DVEKKAMETGDLGALKTSKITAEDGNPNGKVIDLIFPILVLILVSVLSLVYVGGFFDPAS EFYRDFVNAFANTDSSVALAMGSLFALIISIIYFVIRGVISFEKSMESLSEGFSSMVGAI LILTMATSLKNISNDLLGSQEFVGNLMKGAVGSLNSFLPAVIFVVAICLAFATGTSWGTF GILIPIITAMFEIGQPLFFIGISACLSGAVCGDHISPISDTTIMSSAGAGCVHVDHVKTQ LAYGLTVAGIASISYIIAGFTHSAIISLAFGIFAIMVFMVVLKSINKSLA >gi|229269867|gb|GG666044.1| GENE 453 483962 - 484600 863 212 aa, chain - ## HITS:1 COG:FN1733 KEGG:ns NR:ns ## COG: FN1733 COG1394 # Protein_GI_number: 19705054 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Fusobacterium nucleatum # 1 211 1 210 211 224 65.0 1e-58 MAKLKVTPTRMNLNALKGRLATAKRGYKLLKDKQDELMRQFLELIRENKKLREDVEKELS DSFAAFLMASAFMSPEILEEAVSFPTQEVGVDITSKNVMSVRIPKMEFKVKVNEKASMFP YGYATTSVGLDEAILKLNHVVDRLLQLAELEKTTQLMADEIESTRRRVNALEYRTIPDLE ETIKYIRAKLEENERATISRLMKVKDIISEER >gi|229269867|gb|GG666044.1| GENE 454 484604 - 485971 2094 455 aa, chain - ## HITS:1 COG:FN1734 KEGG:ns NR:ns ## COG: FN1734 COG1156 # Protein_GI_number: 19705055 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Fusobacterium nucleatum # 1 454 1 454 458 741 80.0 0 MLKEYRTVTEVVGPLMLVEGVEGVNFEELVDIKLQTGEHRRGRVIEIDKDRAMVQLFEGS SGINLEGTSVRFLGRPLELAVSEDMIGRAFNGLGEVIDDGPEIIPEDKRDVNGTAINPVS RDYPSEFIQTGISTIDGLNTLVRGQKLPIFSGNGLPHNQVAAQIARQAKVLGDDEGFAVV FAAIGITFEEAQFFMDDFKKTGAIDRSVLFINLADDPAIERLSTPKMALTCAEYLAFEKD MQVLVIMTDMTNYAEALREVSAARKEVPGRRGYPGYLYTDLSTIYERAGKLRGKPGTITQ IPILSMPEDDITHPIPDLTGYITEGQIILSRDLYNQGIAPPVSILPSLSRLKDKGIGRGK TREDHADTMNQIYAAYASGVDARELQKILGDSALSAADLAFAEFAKAFEEKYINQGYYTN RSIEETLNLGWELLKIIPKSELKRIDDALIEKYMD >gi|229269867|gb|GG666044.1| GENE 455 485976 - 487733 2117 585 aa, chain - ## HITS:1 COG:SPy0154 KEGG:ns NR:ns ## COG: SPy0154 COG1155 # Protein_GI_number: 15674362 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 567 591 733 64.0 0 MNIGKITKVSGPLIEAEGLTDANIYDVVEVSKDKLIGEIIEMRGDVASIQVYEETTGIGP GDEVRSTGRPLSVELGPGMLERMYDGIQRPLEKLEMLAGNFLEKGVTAPALDREKLWDFE PVANIGDEVVAGDILGTVEETTVITHKIMVPYGVEGKLKDIKTGEFTVADTIAVIETKDG DKELNMIQYWPVRKGRPIKEKIDPNEPLITGQRVIDTFFPVAKGGTAAIPGPFGSGKTVV QHQIAKFADADIVIYVGCGERGNEMTDVLNEFPELVDPKTGESIMKRTVLIANTSNMPVA AREASIYTGITLAEYYRDMGYNVAMMADSTSRWAEALREMSGRLEEMPGDEGYPAYLASR VADFYERAGKVRVLGKRDDIGTLSVIGAVSPPGGDMSEPVTQATLRIVKVFWGLDYDLSY QRHFPAINWLSSYSLYQDKMDKFIDENVDEEFSTMRKRAMSLLQQESGLLEVVRLVGRDA LSDDDKLKLNVTKSIREDYLQQNAFHDVDTYCSLGKQDKMLGLILYNYDKCLEALSKGVE IKQLEGLDVNESISRLKLISEENKLRFDEIRSEIDSAISKLIKEA >gi|229269867|gb|GG666044.1| GENE 456 487745 - 488056 598 103 aa, chain - ## HITS:1 COG:FN1737 KEGG:ns NR:ns ## COG: FN1737 COG1436 # Protein_GI_number: 19705058 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit F # Organism: Fusobacterium nucleatum # 1 102 4 105 105 114 56.0 6e-26 MYKIGVIGDKDSILAFKAIGIDAFTAIDDKDASKLIDKLAGEGYGVIFITEAMAELVSET IDKYRESMTPAIILIPSNKGSLGIGLADINRSVEKAVGANILN >gi|229269867|gb|GG666044.1| GENE 457 488049 - 489083 1394 344 aa, chain - ## HITS:1 COG:FN1738 KEGG:ns NR:ns ## COG: FN1738 COG1527 # Protein_GI_number: 19705059 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit C # Organism: Fusobacterium nucleatum # 1 344 2 334 334 163 31.0 4e-40 MKRENFIAASTSTRIYEDDLLKARDLERLNDYESLSEVLNALNDSSYASAIGELDRDEEY EKILNKELVKVYGKIADVTPDKNISQYLIEKYNFHNLKLLVKELIQEEDYSKIYSPMANV DTAFIKRELLKATDGDVSVGSIGKKEDREIYLAYAQKALNAYRQSENPAMIDISLDKSYY ERELDLAEATGIESLLTYTKEAIDLANIKTLLRIRGQKLDFDHLKNALIEGGNLDKNDVL AMISMDENEIVSKTSSLKVNSYLKKSLDRDKNDKENLLDLEKAIDDHFMDFAKKAKAMTY GPEVLLGFLIAKEQEIKNLRIIFISKLNSLPKDFTRERLRETYV >gi|229269867|gb|GG666044.1| GENE 458 489080 - 489643 664 187 aa, chain - ## HITS:1 COG:FN1739 KEGG:ns NR:ns ## COG: FN1739 COG1390 # Protein_GI_number: 19705060 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit E # Organism: Fusobacterium nucleatum # 1 182 1 182 183 76 31.0 3e-14 MNNLDLILESIKNKAEEEKNQILDQARAEAKEITDQAKSKASEEVKIIMDKAEKEAATTL TNEELSSSRRGRDIKIKAKNELIDQVIDKVLAELKNLDGPTYKKFVLNRLEGFPDSSAEI ILRGGEDFAFDSSDLKGLRLASETTNDGFIIKDGNVTYDNSFSSIIEYERDEIKKIISDA LFTKEEI >gi|229269867|gb|GG666044.1| GENE 459 489659 - 490126 761 155 aa, chain - ## HITS:1 COG:FN1740 KEGG:ns NR:ns ## COG: FN1740 COG0636 # Protein_GI_number: 19705061 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Fusobacterium nucleatum # 5 152 8 155 160 143 59.0 1e-34 MSNFFIENGGIILAVLGMAMATFLPGSGSARGTGMAGEAAAALTVEQPEKFGKALVLQLL PGTQGLYGFVIAFFIMLRLDGNVDFAKGLYFFMASLPIAIAGYTSAIAQAKVAVAGINIL AKKEDEFIKGVVYAVMVELYAILALVISLLLVLRA >gi|229269867|gb|GG666044.1| GENE 460 490126 - 492048 2348 640 aa, chain - ## HITS:1 COG:FN1741 KEGG:ns NR:ns ## COG: FN1741 COG1269 # Protein_GI_number: 19705062 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Fusobacterium nucleatum # 1 625 1 635 638 355 35.0 2e-97 MAIVKMNKFSLLSFYNKRSSLLDILQNFNYVHFNDLKLEENESYLKEVENSVALKSLEDR QDKLKYAVETVKKYSKEESPNELKRLDIENVYRDSENFDFDLIYDKLIKLVKEREGLVDK KQANDSKIDDLFPWKDINLDINDLYNSTRVLVETGSISSQFYDDLRKELVEKHLEKSLVY RLSEKDKVSYIVGISSLDEKEEFKEILREFGFTRIRVKASGPVGDELEKLKADSYKYKND ITKLEEEIAGFFKYMDDFYLYESFLENERKKEASAEYFLKTESMDVIEGFVPADMVDAFK EDLTSVLGEEFMLDIRKADLDDPDVPIILENNSIVEPFESVVETYALPKYNEIDPSLLVA IFYTIFTGFMIGDLGYGLLGVIGTVAMLKMKDLTKSSEKMVKLFFAISLSACFFGILFGS VFGGIIEVPFGWVDTQKDVYTLIGMSFAIGTVALMVSVGMTIIINLKNNRPLDAVYDSLF TYMFLGGIGYYVYSKSKIGLYVMAAGMVGILLFSGRDAKTIGGRLGSGFYNVYGLTSWIG DFVSFLRLMALVLSGGFVAYAVNVIVKMVGGAGIVGILGGILIFVIFQIFNMFLSYLSAY VHGLRLIYVEMFNKFYEGGGIKFREMLEDTKKIIINKRRK >gi|229269867|gb|GG666044.1| GENE 461 492035 - 492358 533 107 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485715|ref|ZP_03916031.1| ## NR: gi|227485715|ref|ZP_03916031.1| V family two sector ATPase [Anaerococcus lactolyticus ATCC 51172] V family two sector ATPase [Anaerococcus lactolyticus ATCC 51172] # 1 107 1 107 107 107 100.0 3e-22 MTDDILNQVKLAEESAAKELDLAKEKARKLVEEAKIKADESYKEEIDRAKVKAKKLVEEA KLKALEESKPVLEKASEVAEEIKKRDLGDIKKTVDLLVERIVNNGNS >gi|229269867|gb|GG666044.1| GENE 462 492459 - 493544 1163 361 aa, chain + ## HITS:1 COG:no KEGG:Apre_1693 NR:ns ## KEGG: Apre_1693 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 361 1 384 386 214 38.0 5e-54 MKKYLLILIIMLFLPGCEKENKANTEIYPLAKIDKFKQDDSLYTGEKLITYPTSIKETNE TYSKKDLDNLDYDKEVRLNDIFFRIPSKCEIFKKEDSYFIDFPLDSSYNILISFKKLDAT YDLIDLSNVLIKEENLAAKIISQPVRNKFTDLDSAYFISRDDEYTYTHFFIKSANSTLYF TIKENGTRAGGKIMSDILMTSYVTGNDPFEVRKTFEDFKDSLSIFATSDVDFADLSLKIP ENFLLKQEGDGFKYFLAKEDNEVLGEIIMKEDRLDGSLYDAYSLNSGDIIYPTQLINMGE VSLNNGILEGEIRLYSRENTLTGKKFVLKKKNYLTIIVVGPLANKSLAISMAESIKESIK K >gi|229269867|gb|GG666044.1| GENE 463 493628 - 494686 1133 352 aa, chain - ## HITS:1 COG:TP0053 KEGG:ns NR:ns ## COG: TP0053 COG0208 # Protein_GI_number: 15639047 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Treponema pallidum # 9 352 8 351 351 483 66.0 1e-136 MEESKKKEVEKRGIFNENGDIDLAKRKIIQGNTTNLNDFNNLKYTWTSDWYRQAMNNFWI PEEINLNQDIKDYRKLDQHEKRAFDRILSFLTYLDSIQTANLPNLQTYVTANEINLCLSI QTYQESIHSQSYSYILDTICSPEERTRILYLWKEDDHLLRRNEFIGEQYNEFLVDDNEFK FVRALIANYILEGIYFYSGFSFFYNLGRNGKMPGTVQEIRYINRDENTHLWLFRSLINDL KKERPDLFTPEATIVYRDMLKEGVRQEIEWGKYAIGDNIAGLSTTMIEDYIKYLGNLRAK GLGFDPLFEGYTEIPQSMKWVDEYSDPNRVKTDFFEAKVTAYSKSSIIEDDL >gi|229269867|gb|GG666044.1| GENE 464 494696 - 494986 82 96 aa, chain - ## HITS:1 COG:no KEGG:Apre_1697 NR:ns ## KEGG: Apre_1697 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 95 14 108 108 89 76.0 5e-17 MSKFISHISFDKTSALIITAIVLTLLQRVVEPILRFFAFPISFLTLGLFHLVISAFVLYL AFKFVDGAYIDSHLFSLIFASIVLSIVSSIVLNIIS >gi|229269867|gb|GG666044.1| GENE 465 495187 - 495366 142 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILFTIESSFKGGNPRERFARSLIGFPLTPPFRYTLRATPLGGQGVCLRQTCWYGGALV >gi|229269867|gb|GG666044.1| GENE 466 495976 - 498504 3063 842 aa, chain - ## HITS:1 COG:TP1008 KEGG:ns NR:ns ## COG: TP1008 COG0209 # Protein_GI_number: 15639992 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Treponema pallidum # 1 842 1 845 845 952 54.0 0 MKIIKRDGSKVDFELEKIKRAIFKAFKSVDSTITDEKLEYIAQKIVGTIEEKFPVDHVVT VEEVQDLVELSLIDENYYREVKSFILYRAKHNMDRKVISDFTKYVSDKDLMEIISKVQRE FDSQRYPIESLYFKFESFTKPEMNDKEVLDAVIRAASELTSKEAPDWEIIAARFLAYKIN LEIRQEEERYDIYDFKSKIRFLTEKGLYGSYILENYSSAEIDELEKHLDYDRDDIFTYSG LDLIRKRYLITSYDGRLLEKVQEMFMGIAMHLAIPEEDKVSFAKRLYDILSTLKATMATP TMTNARKPFNQLSSCFIETVPDTLKGIYRSITNFAEVSKHGGGMGLYFGKVRANGSDIRG FEGVAGGVIRWIRLANDTAVAVDQLGVRQGAVAVYLDIWHKDMPEFLGLRTNNGDDRMKA HDVFPGVCVPDLFWKQVKNNMEGDWYMFDPHEVEKKYGRAIEDTYGEEFEEFYKKLVDDK EISRRIMPIKDMVRLLIKSWSETGTPFIFNRDLVNKYNPNKHKGIIYSSNLCTEIAQNMS PSETVSTEIVTEDGDVVIVNKTKPGDFVECNLASLTLGKLDVNNPKELEETVRTVVRALD NVIDLNYYPTPYAEVTNKKYRAIGLGTSGYHHMLVKNDIRWSDEKAHAELVDRVYEDINY YAIKESVEIAKDKGSYKVFEGSDWQSGAYFTDRDYTSERWEKLAEDVKKYGLRNGYLMAI APTGSTSIISGTSAGVDPIMSRYFLEEKKGAIVPRVAPGLTTKTFWLYENAHDIDQNISM RMAGIRQRHLDQAQSVNIYITTEYTMRQILNVYLTAWESGVKSIYYVRGKSLEVEECDTC SA >gi|229269867|gb|GG666044.1| GENE 467 498695 - 499168 517 157 aa, chain - ## HITS:1 COG:lin1626 KEGG:ns NR:ns ## COG: lin1626 COG1714 # Protein_GI_number: 16800694 # Func_class: S Function unknown # Function: Predicted membrane protein/domain # Organism: Listeria innocua # 16 144 32 161 178 80 39.0 8e-16 MEDKKVFEERDFAYAYSSFGLRFLAYLIDMMVISAIFSIGKFIFPIDPEAKVLGLVLADV IYTIVSLAYFTILSLITRGQSLGKIITGLRVVSVGGGNLSTSQILIREIAGRYIQNKFIF LYALALVTPKKQSFIDLFTDTSVVKEDAFKALYTEEI >gi|229269867|gb|GG666044.1| GENE 468 499158 - 500141 1403 327 aa, chain - ## HITS:1 COG:lin1627 KEGG:ns NR:ns ## COG: lin1627 COG0616 # Protein_GI_number: 16800695 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Periplasmic serine proteases (ClpP class) # Organism: Listeria innocua # 4 322 2 336 337 184 37.0 2e-46 MKNNAKRWIAVGLAVLVLVASMFMKDASEEKEAKGLAYLRDWGKSTLFDQEVIQGTNSAE KIRKISLEGVIQGDENSEFVISELKDAAKDPTTKGVILTVNSPGGSVYVSEKIAKEIKSL KAKKIPVYSVMEEMAASGGYYISAPTDRIYASNETLTGSIGVIMGGRSFQGLFEKYGIKE QNVVSGKMKDTGTMGRDLNAEEKAYLQALVDSAFGRFVKIVSEGRHMSEKDVRKLADGRV YDGAQAVKNGLVDKIGDIDMAIADMIKENKLNDPQVVESSYANISLRQLFQKVSDLKKSS SDLAILKELMEENRQAPMYIYGGVYGR >gi|229269867|gb|GG666044.1| GENE 469 500383 - 501216 872 277 aa, chain + ## HITS:1 COG:alr1286 KEGG:ns NR:ns ## COG: alr1286 COG1606 # Protein_GI_number: 17228781 # Func_class: R General function prediction only # Function: ATP-utilizing enzymes of the PP-loop superfamily # Organism: Nostoc sp. PCC 7120 # 5 269 3 268 275 184 40.0 1e-46 MDKYTKKLYQIMRDLLKEKIVLAFSGGVDSALLLKIASSLRQNENDVVAMFFKAPSSTEE DLVNAKNLAEEMQVKLYIKDVDIFVDDHITNNEKDRCYHCKSHLFKQAIDLKDELGYGYV IDGTNTDDHKVYRPGLMALKNLGVVSPLNMAGFSKEMVRALASELGVSVAKRPSAPCLLT RFPYGTKITPAKLDRLEKAEAFIRDLGFIKFRVRDHSNIARIELEPDDFIKFIDKRYLVI KEFKTLGFSYVTIDLEGFRSGSMDEGLSEEEKKKWVL >gi|229269867|gb|GG666044.1| GENE 470 501216 - 501974 1034 252 aa, chain + ## HITS:1 COG:CAC0776 KEGG:ns NR:ns ## COG: CAC0776 COG1691 # Protein_GI_number: 15894063 # Func_class: R General function prediction only # Function: NCAIR mutase (PurE)-related proteins # Organism: Clostridium acetobutylicum # 1 246 1 248 248 228 53.0 8e-60 MDKKTLIKQIKEGLISEEDALKILEDKGYADVGENAKIDFSRRDRRGFPEAIYCASKDDK SLIEIFKAFYERGESVIGTRASRRQYEIVKAVIDDVEYSDLAQIISLDYSKESEKIGEIA IVSAGTSDLPISLEAEITARFLGAKVKAYRDVGVAGVHRLLDKTEEIKKANVIIAIAGME AALATVLAGLVDKPIIAVPTSVGYGANLGGITALLSMINSCAEGVSVVNIDNGYGAAYQA CQINRLIAKGNK >gi|229269867|gb|GG666044.1| GENE 471 501974 - 502915 1613 313 aa, chain + ## HITS:1 COG:CAC0774 KEGG:ns NR:ns ## COG: CAC0774 COG1641 # Protein_GI_number: 15894061 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 3 303 4 266 420 177 41.0 3e-44 MDLYFEMYSGIAGDMTIGALLDLGASKEKLIEGIKSLGLTGYDLVFERVKKNGIDSYNFD VILAGHDHDHEGDHCHCHEHTHEDGHTHSHEHCHDHDHHDHDHNHHDHEHCHEHTHEDGH THSHEHCHDHDHDHHHDHVHRNLTDIEEIINSSDLNDNIKKNALGIFDIIGDAEAKAHGI DKSEVHFHEVGAIDSIIDIVGTCICLDDLGVENIYFSDLYEGFGYQMCAHGPMPIPVPAV ANILADSEINLNFIGEEGEHITPTGAAIVKYFYKKAPESFKIKKIGLGAGNKDFEKSTNV LRVIEIDTGKKKL >gi|229269867|gb|GG666044.1| GENE 472 502957 - 503340 540 127 aa, chain + ## HITS:1 COG:CAC0774 KEGG:ns NR:ns ## COG: CAC0774 COG1641 # Protein_GI_number: 15894061 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 115 296 411 420 82 40.0 2e-16 MGHATEKIMTIALDCYYSPIFMKKNRPAYKLSVIYKAEDEEKIEDIIFNETTSIGVRKFD LERTTLDRKIIKIPYGDRDYLAKQVTYKDKTYTYPEYESTKDLAENEGLSLKEAYDLMRA LVVKIEK >gi|229269867|gb|GG666044.1| GENE 473 503964 - 506006 1252 680 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 7 655 4 635 636 486 42 1e-136 MNQKPRKNRPLLYYWVGAIIIYFIFSYVFSPISSQDGAKEVSYSQFVEMIDNDQVTEVSK DNLKYTFKAKVEGVEKTYQTGLWEDTDLTKRLLAAQERNNKLKFGKEIETKMNPYLSLFL TSVLPFIFLIGIFYFASRSLSKTMGGRGGADFMNFGKSNAKIYMENETGKTFKDVAGQEE AKESLAEIVDFLHNPGKYKEIGARVPKGILLVGPPGTGKTLLAKAVAGEAKVPFFTISGS EFVEMFVGMGASKVRDLFKQAKEKAPCIVFIDEIDAIGKKRDVSGYSGNDEREQTLNQLL NEMDGFDAAEGVVLLAATNRPEILDPALTRPGRFDRQVQVELPDLKGREDILKVHAKKIK KEENIDYEEIAKRTAGTSGADLANIVNEGALRAVREGRKKLSQEDLEESIETVIAGMQKK NAVISDDQKKIIAYHEVGHALVAAIQTHKTPVTKITIVPRTGGALGYTMTVDKDEKYIMT KQELIDEIVTFAGGRAAEELIFNTKTTGASNDIEKATAMARNMVTIYGMDDEFDFMQLEQ IQGRYLGGQRAMIVSDGTGNKIDQKVAKIIADAHYRAIEILKENIDKLHEISAYLLKEET ITGEEFMEILEGKKDKEVSEEKIDENTDVDVKNLENSEEENQPQEDSEKSVKNESKTEKE EEKNVEDENKRFIDLSKEDE >gi|229269867|gb|GG666044.1| GENE 474 506003 - 506473 559 156 aa, chain - ## HITS:1 COG:no KEGG:Apre_1718 NR:ns ## KEGG: Apre_1718 # Name: not_defined # Def: transcriptional regulator, MarR family # Organism: A.prevotii # Pathway: not_defined # 1 153 1 154 159 195 72.0 4e-49 MPDKHINFFEFNNTIFSMIREISHKIDLLLQDTANKLDLTPLQLKIIIALYSSDKDVSIG NLGKAIGVTGGNISNICKKLEKKGFVDRIRSEEDERVVNVRLTKTGITASKDLGEYFNKI RKEFPDDAVEVNLETIVEELKELDLLLDKYISRRLI >gi|229269867|gb|GG666044.1| GENE 475 506561 - 507421 252 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 3 282 2 303 306 101 28 5e-20 MTYDIAIIGAGPAGLSAALNSKIRNKSVIIFGKDSEKLVKTKKIANYLGFKDITGSDLNE NFKNSIEGFEIKRDSRKVKTIYAMGDFFAIEIENESEMLEARSVIMATGIELKKDLLNED KFFAKGVNYCATCDAALYRGKKVVVIGYNDEAVGEANFTSEIVGSLVFVNMTGKEVSLNS GIEVIEGEIPIGFDGEKRAEKLIFKSGKEIIADGFFIEKDSSKPERLVPGIKMEGNHIQV ARDLSTSIKGLFAAGDITGKPYQIMKAVGEGQVAALSAASYLSKNN >gi|229269867|gb|GG666044.1| GENE 476 507421 - 507729 371 102 aa, chain - ## HITS:1 COG:SA0992 KEGG:ns NR:ns ## COG: SA0992 COG0526 # Protein_GI_number: 15926729 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Staphylococcus aureus N315 # 3 102 5 104 104 93 46.0 1e-19 MQKLDTFEFREKVENGTGLSLVDFSATWCGPCKMQAPILDQLAGEVDYNIYTVDVDESNE IAAQYNINAVPSLLIFKDGVLKGNLIGFHPKEALVEEMAKYL >gi|229269867|gb|GG666044.1| GENE 477 507747 - 508346 676 199 aa, chain - ## HITS:1 COG:no KEGG:Apre_1722 NR:ns ## KEGG: Apre_1722 # Name: not_defined # Def: nitrogen regulatory protein P-II (GlnB, GlnK) # Organism: A.prevotii # Pathway: not_defined # 94 196 1 103 105 152 71.0 5e-36 MQLLRIILPRGKGSKFMKILKNDGATAIGCFYGEGSAPSEILNALAIDKTKKEIVTALIE EESVKKIIEEISEKLAAVNSAVAFSTSLEGENKMEYVCLYVIVDRHQGQKAIHIAQDHGA RGATVIHGRGSGEAVKSKLFLSMNIEPEKDLVIMLVKKDLAEKIRQEIYDQMDLASQGKG IIYSLPVNHVAGLVEQSDN >gi|229269867|gb|GG666044.1| GENE 478 508346 - 509737 1397 463 aa, chain - ## HITS:1 COG:no KEGG:HMPREF9243_1143 NR:ns ## KEGG: HMPREF9243_1143 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 4 460 3 479 486 316 45.0 1e-84 MIIIFLDEIKNTSKSVIPIAILVVILNFFVGVENGLLVNFFLGCVGVIVGLGVFLTGVEI SVSEIGSMMGEFLGRFDKLIKVIVFGVFIGFTISIAEPDLLILAGEVTSAIGIPAQVIVM IISLGVGIMISAGLFRIFKDISLSTMMCVIYGLVFILMIFTEEMGHAIAFDASGATTGAM TTPFIIALGLGVANLKGEKSEDDSFGLVGLASTGPILAGLLMSLFKGGGGEIVAEEVAHT PLMSGFINSTFAIVPIALVFYIMNHLYFKTEKDELKSITLGLIYTYIGLIIFLTSVEGGF MELARVMGEGLADSKFLPLIGFVLGLLVVLAEPAVAVLSEQVEDVTGGSIPRKNILTALS IGVAFAVMLAIFRIRIEGFALWMLIVPGFLISLILSRRVDQIFVGIAFDSGGVASGPMTA TFILAFCQGVAGNIADGFGVISFVAMMPVLTIMIMGNLYKGAR >gi|229269867|gb|GG666044.1| GENE 479 509800 - 510819 1646 339 aa, chain - ## HITS:1 COG:SPy1128 KEGG:ns NR:ns ## COG: SPy1128 COG0280 # Protein_GI_number: 15675108 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Streptococcus pyogenes M1 GAS # 14 328 14 328 331 348 59.0 1e-95 MARIGILEEAINIIKGKNLTIVLPEGNDPRVLEAAIRHQEEGLIKPLVLGDQGEIQKTAN KLGKSISAIKILNPETFEQFEDMVDAFAEIRKGKIDRDEAEFILKRDLNYFGVMLVKLGY ADGLVSGAIHTTADTIRPALQIIRTIPGRKRVSGVMVMLGPNGEQLVFADTAVNITLEAD ELAEVAVETAHTAKTFGLDPYVAMLSFSTHGSAHHDLATKVARATAIAKDINPDMKIVGE IQFDAAIDPETAKNKAPESDVAGKCNVFIFPDLQAGNIGYKIAQRLGGYKALGPILQGLN APVNDLSRGCSAQDVYEIAIITAMQAAERAREAAEAANK >gi|229269867|gb|GG666044.1| GENE 480 510894 - 511307 403 137 aa, chain - ## HITS:1 COG:no KEGG:Apre_1725 NR:ns ## KEGG: Apre_1725 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 136 20 154 155 175 65.0 6e-43 MLKSLQDRTRRQKQRYDHLLRGNDPDVNIEELLNNLNDQIESSHKELRNINKTAADAKDT TMGAVSNMAVVHFDAFEGQSRELSFALCMLDNFHNGIILTSLYGDDGANVYLKEIVNGAC KGELSEAETKALNKAKR >gi|229269867|gb|GG666044.1| GENE 481 511364 - 511927 449 187 aa, chain - ## HITS:1 COG:no KEGG:Apre_1726 NR:ns ## KEGG: Apre_1726 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 186 1 170 170 105 41.0 8e-22 MKINDLRVGELIEETRKVHAKPGGGAIVILTANLAVNLGLMMDKNNWGDLEEKAKENRKV MEEISDLLTKCADDDIYYANLLIDQYKTKAPIDEKFYVDASKPQIRLNTLALKALEVLSF FLKYGKASTLADGEIANELIYNSIKSSEPTLKANLNETNYKYNIGEVLDEAYRLYQNNRN IIERRKA >gi|229269867|gb|GG666044.1| GENE 482 511917 - 512843 1145 308 aa, chain - ## HITS:1 COG:HP1138 KEGG:ns NR:ns ## COG: HP1138 COG1475 # Protein_GI_number: 15645752 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Helicobacter pylori 26695 # 1 292 1 276 290 163 36.0 3e-40 MTNRRSLGRGLSSLIPDIKEERKDSIRGFDEVDFSKVASLPIEKVKPRPGQPRKDFDSKA LEDLAHSIKEYGLLNPITVTKNGDYYEILAGERRYRATLLNQADTIDAIVKTYEQKDIEV LSLIENVQREDLSAIEEATAYKKLIDSYGLTQEEIAKKMGKSRSYIANTIRLLKLNEEEK AALRDGSISPSQARSLLSLDDGEKRDKALDDYINKKVVVRDVEKISREDKNPPRKNFIDL TGKSDNKPKEEKIPNLDSLLFDDFEEKFMDKLATKVAIEKTKDAYKVVIDCYSIEDIEKI YDRISYED >gi|229269867|gb|GG666044.1| GENE 483 512852 - 513790 962 312 aa, chain - ## HITS:1 COG:BS_soj KEGG:ns NR:ns ## COG: BS_soj COG1192 # Protein_GI_number: 16081149 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Bacillus subtilis # 2 310 3 249 253 237 44.0 2e-62 MKTISVFNQKGGVGKTTTVVNLAVALSYLDKKVLVIDMDPQANATTGLGIDKNKVDTSIY DLFYIMAEEVQNKEANHDEEISKETKEEDKEVADEGKKARFIDLTGKKDSEAKIEEKTEE KIKENDRVGLAQYIIRSKSGVDLIPSENSLSGLEVELVDLDPLERTQKLKEIVEEIKAPY DFILIDCPPSLGLLSINALVASDSIIIPIQTEYYALEGVSELMNTFELVKESLNKDLYVE GVLLSMFDKRTKLAYEVVEEVKKFFKDKVFMTMIPRNVRLAEAPSHGESAIEYDTKSQGA MAYISLASELIK >gi|229269867|gb|GG666044.1| GENE 484 513768 - 514982 1073 404 aa, chain - ## HITS:1 COG:CAC3586_1 KEGG:ns NR:ns ## COG: CAC3586_1 COG1058 # Protein_GI_number: 15896820 # Func_class: R General function prediction only # Function: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA # Organism: Clostridium acetobutylicum # 1 223 1 228 245 166 42.0 6e-41 MKAIIYSVGTEILLGSILDTNSKFIAERLQDLGINLYKMVTVGDNPERLYQALKEANGKY DYVFVSGGLGPTEDDLTKETAVRVLGLEDEMVLDDDSYEELKKYFNDEKKAMTVNKKQAI FPKSATILKNNQGTAPGCIIGDKTKYILMPGPPNEMCHMFDEEVVPRIHTDLMIKSVNCK IALLCEWEISKRIDLSGSDPTISPYAKTTGVELRVTASSTNKDHLEASLKKGVDLVKNTF GPLLLTTEDKSREEVLIDELRAKGEFVSAAESITGGLVASSIVDIPGASDVLKESYITYA NEIKHKLLNVSYETIEKYDVVSPEVAGEMLDGLHKATGSDLCLATTGYAHLGVAYAGVLY KGKKYIRKVKAKGDRNKVRRVVKNKLIDMSILIVRGEYEDYIGI >gi|229269867|gb|GG666044.1| GENE 485 515073 - 515876 590 267 aa, chain - ## HITS:1 COG:slr0959 KEGG:ns NR:ns ## COG: slr0959 COG1266 # Protein_GI_number: 16331018 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Synechocystis # 142 229 430 516 529 64 37.0 2e-10 MEKFKKGLKVFFIIMAFVIINVIIDVITGASVPGIIANIKDGDMLKAGDYIIYGLLIGQL IKLTILYFYIGKRDNIYRNELGRRYIENEKISNPLIFVGIGFGTLGFGNILENIIMKALE GSKLVNDALELLEKAFRAKGPVDGIFILIAVIIGAPLVEELLFRGVLFEELRKEISLKVT IFLTALVFGIYHFNILQSSNAFFLGLVLAYVYYKTRSIKASIIVHATNNMIAMIPFLDQG LSPIGICIYTALLIIGIYSLITLRQKA >gi|229269867|gb|GG666044.1| GENE 486 515904 - 516533 698 209 aa, chain - ## HITS:1 COG:BH4060 KEGG:ns NR:ns ## COG: BH4060 COG0357 # Protein_GI_number: 15616622 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Bacillus halodurans # 1 209 22 237 238 176 45.0 2e-44 MDKYIVYTDYLLEVNSHTNLTTITDPAEIDLKHFKDSLTVLDYIKEGDKVLDLGAGAGFP GIPLRIEKDFDLTLIDSVNKKVNFMNEVIEKLGLTNARAIHTRAEDFAKDHREGFDVVVS RAVANMATLSELCLPLVKVGGLFIALKGPKADEEVKEASNALEILGGEVIEKNHFDLAGN ERCNVVVKKVRSCKKTYPRGQNLPKRKPL >gi|229269867|gb|GG666044.1| GENE 487 516526 - 518412 2190 628 aa, chain - ## HITS:1 COG:CAC3733 KEGG:ns NR:ns ## COG: CAC3733 COG0445 # Protein_GI_number: 15896964 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: NAD/FAD-utilizing enzyme apparently involved in cell division # Organism: Clostridium acetobutylicum # 4 621 3 619 626 699 56.0 0 MENKYQAGSYDVVVVGAGHAGCEAGLAAARLGMKTLVLTTSMESIADMPCNPNIGGTGKG HIVREIDALGGEMAINIDKTFIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKKVLEDNLD LFEQEVDKINYQDGKIVSCETVQGAIYETKAIIICTGTYLNGKILIGDYEKVSGPHGLSA ATYLTDSLREMGFSIRRFKTGTPARVHRDSINYEKTTVQEGDKEVIPFSFLNEGKDYTDR RQEDCFLTYTTEETKQIIMDNLDRSPIYGGKIKGIGPRYCPSIEDKMVRFPDRDIHQVFI EPEGLSTKEMYVQGVSSSLPQEVQMEFYKTIIGLEDVKIMRPAYAIEYDMIDTRELKRTL ESKAYSGLYFAGQINGSSGYEEAAGQGLIAGINAALKIKGEEEFILDRSDAYIGVLIDDL VTEGTNEPYRMMTSRCEYRLTMRQDNADERLSKKGRDIGLVTDERYQKMLDKREKITSEI ERLKNIMLTPKDETNKALEELGSTPLNNGLTLYELIKRPEITYQNSVIFDPERSDLPSYI SLSVQTEIKYEGYIKKQLKDIEKFKKLESKKLSHDIDYAKIPGLKKESAEKLNEIKPDSI GQASRISGVSPADINVLLIRLKTGELYG >gi|229269867|gb|GG666044.1| GENE 488 518402 - 519766 1554 454 aa, chain - ## HITS:1 COG:BS_thdF KEGG:ns NR:ns ## COG: BS_thdF COG0486 # Protein_GI_number: 16081154 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 4 454 3 459 459 371 44.0 1e-102 MAKTIAAISTPAGTGGISIVRMTGDLTLDIINEIFRPINNRLIDPDIDNRYLRYGHIVDG EGEIVDEVMVAFMKAPATYTREDVCEINCHGSFVAVREILNLLLDKGADLAEPGEFTKRA FLNGRIDLSQAEAVLDIINSTNKLSASQGISQLQGSLTKKIREIRTDLKEGLARLEYSIN FTEDGEDLPVSDITAYIKTAKAKIDDLASTSNKGKLVKDGINTTIVGKPNVGKSSLLNVL LDENRAIVTDIPGTTRDLITEYISLGDFTLKINDTAGIRDTDDLVEKIGVDKSIELIDES DLILAIFDMSRDFDEEDKKILDLIRGKNALLILNKADLEGKFDEKIFDVNLPIIKTSMVD QLGIRKLEDTIRDIFDTKEIKRESVLITNTRHERLLKSAKEKIDQSLNDMEAGIPIDACE VDLSSAYEDLGLIIGESVSGEIMDKVFKEFCVGK >gi|229269867|gb|GG666044.1| GENE 489 520000 - 521691 2353 563 aa, chain + ## HITS:1 COG:BH1407 KEGG:ns NR:ns ## COG: BH1407 COG1283 # Protein_GI_number: 15613970 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/phosphate symporter # Organism: Bacillus halodurans # 16 543 14 539 543 347 38.0 4e-95 MNLSSLSSLQWNLIAGGLAIFLFGISLMGDALTNFAGPKMRGLVEKYTSNPIKGVLVGIV ITGLIQSSSATTVIAISFVRAGIMSLEQAIGVTLGANIGTTVTSILIGFNLGYFSYFIAL VGVLVFMFSAKRKNKYIGEIFIGFGLLFIGLEMMGASLEELKNIPGFEEVVANVGQKPVL GVLIGTVLTALLQSSSAFIGITQSLFATGAIKLNVALALMFGANIGTCITAILASLGGSL SAKRTSLFHILFNVSISIVFLAILGPYQKLVEFIAGAIGANKLMTIAVGHFTFNFVGMIL FLPFIKLVARILRKIIPGKDSILTDLGNIELDEKLISTFPAAALSQTKTAIIQESVVALE NIKATKSYLNTKDKKYYDTAKEAESMVNDMDTKIQAYLLTLAQSQSPPDIERDMQTYLQV QINVERISDLSENLADYYHEIYETGTGYGEEALADLNDICDLVINNIAMAVEVFEEEDVA KYNKLSEDEAALDLMEVKLRKSHYRRLRKGLDMTTMASYVYNDILSTMERIGDHAFNIAR ITVDPVKTHTGYHIEGEENMELF >gi|229269867|gb|GG666044.1| GENE 490 521789 - 523087 761 432 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020581|ref|YP_526408.1| ribosomal protein L16 [Saccharophagus degradans 2-40] # 6 428 3 426 435 297 38 4e-79 MSREFLSILPIILVFVLYFLNVPIVFCLFASTLFYFFVIDKGTSPVLVFQKFITSTQNFS LLAIPFFIMAGSIMNYSGISEKLMDFADVLTGHLKGGLGHVNVVLSLLMGGVSGSANADA AMQSKMLVPEMVKKGYSNAFSSAITAASSAVTPVIPPGINLIIYGIIASVSVNKMFIAGY IPGLLMAGSMMVVVAIIANKRDYQPTREKRATAYEILIQAFKSFWALLFPFGIIASIRIG MVTPSEAGAVAILYSTVVGFFIYKRLKPSDFINIFKETIYGTGSVVLIIVAANVFGYYLS WEQIPQKLTTLLLGITTNKYIMLMICNIILLVLGMFIEGGAAMVITAPLLVPLVTQLGVD PLHFGLVVIVNIMVGGITPPFGSMMFTVCGITRCSIEEFIKEVRPFILAILVVLILITYV PAIVLFLPNLIG >gi|229269867|gb|GG666044.1| GENE 491 523080 - 523556 336 158 aa, chain - ## HITS:1 COG:FN1257 KEGG:ns NR:ns ## COG: FN1257 COG3090 # Protein_GI_number: 19704592 # Func_class: G Carbohydrate transport and metabolism # Function: TRAP-type C4-dicarboxylate transport system, small permease component # Organism: Fusobacterium nucleatum # 32 151 22 140 147 79 40.0 4e-15 MGKKLLDNFEEIIASLFLMGTTVLVVANIISRYFLKTGIFWSEEVATGFFVWSVFIGAAA AFKKGQHIGIDIIVSKLSGRNRAIANVLIDLVVLIVIGFITVFSVLYVKTSYTKPTPVLG VSSAYISSSIIVGFTFMLIRAFIFLFDDIKKLGGKSDE >gi|229269867|gb|GG666044.1| GENE 492 523597 - 524679 306 360 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149199369|ref|ZP_01876406.1| Ribosomal protein L22 [Lentisphaera araneosa HTCC2155] # 37 342 28 331 346 122 26 3e-26 MKKRILATALLLASVFAFSACGGKDNKEGKDAKEETKVESKEDKDTAKDEKKDDFKIVLK LSHVFAPGEQLTISTDKAAKAITERTNGAVEIQTYPQGQLPTYKDGLEQVANGADFISVE DPSYLGDYVPDFKALVGPFLYKDIDQYTKMTQTDLVKGMIQKLEDEHKIKVLSLNYTFGF RNLMTNKVIEKPEDLKGMKIRVPGSQIFIDTINAMGATATPMAFSETISAVGQKAVDGLE GTVDAMGANGSAEVVKNVALTRHFLGVCGIYINKDVFDSIPKEYQDIIVEEFTKNGEEMT EKVKNNYESQKKALEDDHGIKFNDVDYEAFQKACMPVYDKMEGISDGILDKLLAEIEKMK >gi|229269867|gb|GG666044.1| GENE 493 524695 - 525402 728 235 aa, chain - ## HITS:1 COG:BS_yqiK KEGG:ns NR:ns ## COG: BS_yqiK COG0584 # Protein_GI_number: 16079474 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Bacillus subtilis # 4 232 5 237 239 175 39.0 6e-44 MLNFAHRGFKSKYPENTMLAFVKAYEEGADGIEFDVHLTKDNEIVIMHDENTLRTTGKDA YIKDLTFAELRQLNAAKDYEGVDEKIPTLREYFEFVKDKKILTNIELKNSIFRYENLEEK VCELIDEFDLEDYIIISSFNHQSILKVKELKPNLKCALLTESVLIEPWNYVGKNKIEYFH PMVQTVTSEDIKKCQDNNVKVNVWFGKEDFDFQEAKDLGVDGLITDYPDLIKKLK >gi|229269867|gb|GG666044.1| GENE 494 525562 - 526350 715 262 aa, chain - ## HITS:1 COG:FN1255 KEGG:ns NR:ns ## COG: FN1255 COG0647 # Protein_GI_number: 19704590 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Fusobacterium nucleatum # 1 262 12 274 275 274 53.0 1e-73 MENTIDKSVFLLDMDGTIYLGNVLIDGAKEFLDKIISEGKRYIFLTNNASKDKSTYVKKL EALGIRAGKDDVFTSADASISYLSKLGKKRLFLVGNTSLRNQLLDAGFEIVDERNQDIDA VLVSFDTELNYEKLWIACDYLQDGYDYYATHPDFVCPLEGGRIMPDAGSIIELLFACVGR RPIVIGKPEDKMIEALIGAYGFKKDDLIMVGDRLYTDIAMGYKSGIKSVLVLSGETSLED YKKSDVKADYIFSSVKDMVEKI >gi|229269867|gb|GG666044.1| GENE 495 526557 - 527210 905 217 aa, chain + ## HITS:1 COG:L63770 KEGG:ns NR:ns ## COG: L63770 COG1285 # Protein_GI_number: 15673601 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Lactococcus lactis # 1 123 1 128 223 135 54.0 7e-32 MNILDSFNLNLLLRIALSVLAGFIIGSERETKNKSAGVRTHTIVCLGACIAMIISKYGFY DVKNYDAARVAAQIVSGVGFLGAGVIFVKNYGVTGLTTAAGMWTTSIVGMAFGAGMYFVG IVAAAFIVIFQTFMFSGEIFKRHDQYTAIIESRNSNIIGRIDTYIEQNHLIKKAYNLRFK DQKYILNFLIYPKDAEELNEFIAFLESDLHVEKFDIF >gi|229269867|gb|GG666044.1| GENE 496 527272 - 528018 690 248 aa, chain - ## HITS:1 COG:TVN0442 KEGG:ns NR:ns ## COG: TVN0442 COG0863 # Protein_GI_number: 13541273 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Thermoplasma volcanium # 4 248 96 346 347 138 33.0 9e-33 MSKIKKWEPDDFELEMTTHWSFPQRGNWATHDAKWRGNWSPYIPRNIILRYSEEGDLVLD QFAGGGTTLVEAKLLNRNIIGLDVNDVALNRCKEKIDFNLTDRPLGKVKLLKGDARNLDF LTDESIDLVCTHPPYADIIKYSDGIENDLSLLKINDFLKEMNKVAAEAYRVLKKDKFCAI LMGDTRKNKHMIHLGFDVLKVFEDEGFKLKELIIKEQHNTRATGFWKKRSVDYNFLLIAH EYLFILKK >gi|229269867|gb|GG666044.1| GENE 497 528034 - 529371 1027 445 aa, chain - ## HITS:1 COG:no KEGG:MLC_0510 NR:ns ## KEGG: MLC_0510 # Name: not_defined # Def: hypothetical protein # Organism: M.mycoides_capri_LC95010 # Pathway: not_defined # 8 442 4 427 427 365 49.0 2e-99 MIKTDKSNEAWKELFNKYDIVKNVKEKGYFKIKASQIKEFREPRLMAKWDSYDSLPSILK DKNINILPITRGSYILSDFKLYQSVKNSFTTSTKMHKVKIPKLESVDVRNITSESNAINV LLLSNILDKFLNEDGNVSTFNGRMGTGKFKFNVDRKNRGPLEVEVDKAQCEIDGGMENKN SVVIMEAKNVVNNDFHIRQLYYPYRLWRERVNKPIRLVFSVYSNQIYRLQEYVFTDINNY SSIQLVKENYYSLEDTEISIGEIFEIYKSTKVETDDNMISNSKDSTPFIQADSFERVISL LEVLYKEDLTTEEIAGVMEFKTRQSDYYYNAGKYLGIFEKYIDTEDTDAEGKNLKKVRLT KLGKIIVKKSYKDRQLALVKLMFKHKIFSELFFELYSTGKIPIKDSIQEKMRKYNVCSER VIDRRSSSVVGWLSWICSLTNIEEI >gi|229269867|gb|GG666044.1| GENE 498 529355 - 530266 770 303 aa, chain - ## HITS:1 COG:MJ0598 KEGG:ns NR:ns ## COG: MJ0598 COG0338 # Protein_GI_number: 15668778 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Methanococcus jannaschii # 7 299 1 289 289 259 51.0 5e-69 MSADKNIEAKPFLKWAGGKSQLLDEIRKYYPFDNEINKYCEPFVGAGAVLFDVLNRFDLK EVYISDINKEAINSYRVIRDNVEGLIEILDLFQNEYIDLTLEERKVIYYRNRDEFNILKH AKNSTDLRRAALFIFLNKTGFNGLYRENMSGDFNVPIGSYKNPKIVDKENLINVNKKLQN VKIVHGDYKESENFIDSNTFVYFDPPYRPIKPTSNFTAYNKSDFTDDNQIELAEYFKKMD KKSAHLLLSNSDPKNYNKDDNFFDNLYKDFNINRVKASRTINSNKDNRGQIYEVLINNYD KDR >gi|229269867|gb|GG666044.1| GENE 499 530379 - 531335 1515 318 aa, chain - ## HITS:1 COG:SP2040 KEGG:ns NR:ns ## COG: SP2040 COG1847 # Protein_GI_number: 15901861 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Streptococcus pneumoniae TIGR4 # 8 314 5 326 328 80 26.0 3e-15 MKQSLTKSAKTVEEAVQLALDEIGKKRNEVTIEVLDEGSGGFLGLIGGKDAVVRITYDED MERVLEDLKNEIEVDSLREVEKDYDVKKRSEEIKREEGIPTEEPIKEEAKDLGDAIKEKF DEIGDFIEKETDEIFEDKDEKETVEEENSDEEAENRDYALSKKRSNIDSYYKAKELLEQI LTAMHFENVSVIGNLEGSIIKLDAKVDESDTGIAIGKNGACLDSIEFIIRKAIDSRSNNL RVNVDINNYKRRRDEKIVRLARETAQKVVQSGKSWNLRYMNSYERRLAHEEISKHRNVSS HSEGREPQRYVVVDYVEE >gi|229269867|gb|GG666044.1| GENE 500 531332 - 532042 668 236 aa, chain - ## HITS:1 COG:HI1001 KEGG:ns NR:ns ## COG: HI1001 COG0706 # Protein_GI_number: 16272937 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Haemophilus influenzae # 30 236 347 539 541 102 30.0 8e-22 MFKFIANILGKLMRILYDNIATNFTEPKTISFYAIAIIIMTLLVSLISIPVTISTQKQAE KTRSFKPKMDEIQKKYGYDQQVLQKKMQELYKQEGVTPGLSGCLPMIIQLLVLFGLFEMM RNTGKYVFPEGLNHIRTDFYWVPDLLKADPLWFGLPLLTSLSQLLTTLFSIKTNPQQQQA MGSMNTMMLVLPLVFFFTFRQLPAGLPLYYTLSSVFRLLIMVVMHLAMKGKKVEEK >gi|229269867|gb|GG666044.1| GENE 501 532084 - 532299 165 71 aa, chain - ## HITS:1 COG:CAC3737 KEGG:ns NR:ns ## COG: CAC3737 COG0759 # Protein_GI_number: 15896968 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 71 1 71 71 84 56.0 6e-17 MLNKVFIKMIRFYQKFISPQLGHGKCKYYPTCSNYAIEAFKKYGPVKAFFMSLWRILRCN PFSKGGYDPVK >gi|229269867|gb|GG666044.1| GENE 502 532289 - 532639 391 116 aa, chain - ## HITS:1 COG:PM1163 KEGG:ns NR:ns ## COG: PM1163 COG0594 # Protein_GI_number: 15603028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase P protein component # Organism: Pasteurella multocida # 3 99 19 116 130 58 35.0 4e-09 MEKRLSLKKDKDFKKVYKKNFACYNRDFTVLVRDNDLKNPRFGFTISKKIGKAHSRNQLK RKLREIARINYANLNGVDIVIIPKKHTTEFDYQRLKSSLGHALNQAFRKKKIFYAK >gi|229269867|gb|GG666044.1| GENE 503 532657 - 532791 224 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227500987|ref|ZP_03931036.1| ribosomal protein L34 [Anaerococcus tetradius ATCC 35098] # 1 44 1 44 44 90 97 8e-17 MKRTYQPNRRKRSKDHGFRKRMSSPGGRRVLKARRKKNRKRLSA >gi|229269867|gb|GG666044.1| GENE 504 533505 - 534884 1743 459 aa, chain + ## HITS:1 COG:lin0001 KEGG:ns NR:ns ## COG: lin0001 COG0593 # Protein_GI_number: 16799080 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Listeria innocua # 1 458 1 445 451 322 43.0 1e-87 MKNLEFITNELKNEMKMHVSDKQQFNTWINILKPLNLHKDVLYLEIPKKDTLFIFEGIWK AKLQEALDGIAEKIGGKLKVEVVAKDGEDYQKILTLGRDYDKDGQMRIDKVKSFPKPQLE EANVFENFVQGKSNQYALGISQAVADTISRGDVSKVYNPLFIYGSSGLGKTHLIQAIAHQ ILEARDDAYVMYLSSEKFTNEMIAALRTNKNQEFREKYRSADILLIDDIQFIANKEATQE EFFHTFNDLYNAGKQIVITSDKPPREIKHLEDRLVSRFNYGIIADISRPDYETRVAILQK KLEDLGAIIDNSILSYIALEIDTNIRDLEGALSTAIAYAKSDGRIEVSMEDAIKGVGTRV KNKRKKLTIADIQQAVANKYNVKLQDLKGKSRKKEIVNPRQIAMFISRELLDDSLVTIAN AFERDHTTVIHGIDKITDMIDEDEDLKNEIDALIKEIKD >gi|229269867|gb|GG666044.1| GENE 505 535107 - 536219 1182 370 aa, chain + ## HITS:1 COG:CAC0002 KEGG:ns NR:ns ## COG: CAC0002 COG0592 # Protein_GI_number: 15893300 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Clostridium acetobutylicum # 1 369 1 364 366 201 34.0 1e-51 MKFEIKQKELMKALNIVNRAVSKSTNIQIHELIYFSTENNRLSMTSFDGEISIKTLADAK IIKEGVMAVKADLITNIIRKLPDELVKIELDGGKIKISCKRSNFNLVAFEYFDKEEINIP NTVALSIDNDKLKRSISQTEFATTLDETKLALTGILFELKEGCLNMVALDGYRVALKKIK LDYPGDFEDTEYIIPKRSLLEWSRIVSDDSKTSLYRNENDLLFASEDTIMLCKVIDKNFI DYRNIINDISETTVLVEKSALIAALDRAQVLSDPGRANLIRVNIEDRAMTLRSNSEIGDV KEVIEIDQEGEGLDIAFNAKYMQDGVRACDSEKIKLNFKSSLNPCLIYPTDSKHEGEDYT YLVLPVRLAR >gi|229269867|gb|GG666044.1| GENE 506 536224 - 536430 267 68 aa, chain + ## HITS:1 COG:no KEGG:Apre_0003 NR:ns ## KEGG: Apre_0003 # Name: not_defined # Def: S4 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 67 1 67 68 81 62.0 1e-14 MEVIEFKTDEIRLKDLLKATDLLASGGLAKHIIREEGVLINDEPCYIAGKKLHPGDEIVF DGVKIIIK >gi|229269867|gb|GG666044.1| GENE 507 536430 - 537533 919 367 aa, chain + ## HITS:1 COG:CAC0004 KEGG:ns NR:ns ## COG: CAC0004 COG1195 # Protein_GI_number: 15893302 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Clostridium acetobutylicum # 1 356 1 360 363 207 36.0 2e-53 MWIQDIKLYNFRNYFYESVNFNESTNIFIGDNAQGKTNLLESCYYLANATSFKKLRDKDI IKFGQEKMEISGTIRKGRSFKKVLIRVDGTDKNIFVNEVEYKRNKDLKSLFRLVLFTPED LNIIKEGPNLRRELLDEIIASIDFSYARVKKDYDKILFARNKLLKNRNSSYFKEQLDAFD KSLVKEGYKIYKSRIKFVKFVEEYAQDFQNALTDGKEKLEIDYLPDISAESLDEYYKKFL EKREDDLRYLSTQAGVHRDDIIIKINGKNTRLFASQGQQRSAIINIKLAEVKLVRQISGD RAVILLDDVFSELDETRSKFLLENLSDYQTIITATNTKSLENVPADKISYISDGRIRKEK YDRKQQL >gi|229269867|gb|GG666044.1| GENE 508 537511 - 539415 2206 634 aa, chain + ## HITS:1 COG:CAC0006 KEGG:ns NR:ns ## COG: CAC0006 COG0187 # Protein_GI_number: 15893304 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Clostridium acetobutylicum # 1 634 1 637 637 774 60.0 0 MTENNNYDAGNIRVLEGLEPVRLRPGMYIGSTSSRGLHHLVYEVVDNSVDEALAGRCDYI KVTINKDNVVSVEDDGSGIPVKEHPTTHKSTLETVLTVLHAGGKFDDSAYKVSGGLHGVG VSVVNALSEYLIAEVKRDGHVYKMEFARGEVTKDIEVIGDTTETGTKITFKPDGEIFDTT IFERSILENRFREMAFLNKGVEIRFEDERENFETSFKFEGGISEFVSFLNRNKDPIMEMI PHFDGSQEGIEVEFAFQYTDGYSENILSYANNIQTPEGGTHLSGLRSSLTRSVNDYARKY NFIKDNEENLQGEDIREGITAIISVKISDPQFEGQTKSKLGNSEVRGVVDSYVSEHLTAF LEENPKPAKSIIDKALASRRAREAARKARDLTRKRSILDSATLPGKLADCQSTDISENEI FIVEGNSAGGSAKGGRDNRIQAILPLRGKIMNVEKAHLDKVLNSEEIKNMITAFGTGIGK EFDISKLRYGKIIIMTDADVDGAHIRTLLLTFFYRYMKDLIDEGHVYVALPPLYRISQGK KERYVYSDDEKDKYIKELGDATFKINRYKGLGEMNAEQLWETTMDPDRRVLLRVEEDLES TTTDDTFSLLMGEKVEPRRNFIQENAKYVTDIDV >gi|229269867|gb|GG666044.1| GENE 509 539425 - 541872 2880 815 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 1 813 1 816 830 848 55.0 0 MTENQNIINIDLEKKMKSSYLEYSMSVIVSRALPDVRDGLKPVHRRILYGMQQLGLDPNK PTRKSARVVGDVMGKFHPHGDSAIYDALVRLAQDFSTRYPLAQGQGNFGSIDGDQAAAMR YTEVRMSKIAKEMLRDIGKDTVDFIPNFDGEEMEPSVLPSRFPNLLVNGSNGIAVGMATN MAPHNLGESIDACIAYMRNPEISIDDLIKFIPGPDFPTGALILGKTGIKEAYTTGRGKIK QRAVCRIEPFKKNRERIIISEIPYQVNKARLIEKIADLVKEKRIDGISDIRDESDRKGMR IVVEIKRDSNANIVLNNLYKYTQLENTFGIINLALVGGEPKILNLKELIEYYVDHQKEVV TRRTNFDLSRARERKHIVEGLIIAIDHIDEIIKIIRSSYDNDEIKKIFFDRYKLSDAQSQ AILDMQLKRLSGLEIEKLNAENKELADTIEYLLSILNSEENLINLIIDEITEIKEKYSDE RRTKIVPDEGEIDITELIEEEDILINLTKDGYIKRLPIDTYKVQNRGGKGIAAGNTKEGD FIKKIITTNTHEDLLFFTSLGKVYSLEAYKIPEGSRTSRGQAIINILNLETGEKITEMMT LSELSKNSQLVLQTQQGQIKKTDAENFTNIRRNGIIAISLKDWDKLISVRQIDKDEELII STQNGMTIQFNTKDVRSMGRSAVGVRAIRLDKDDAVVSMNIKGEETYLLVVTENGFGKKT SFSNFKNQNRGGKGVRCHKVSEKTGKVVDTLPVDLDTDIMMVSLKGDMIRLSARDVSTTG RNTMGVKLKNLASEEDAIVSVTTYDNMLEDEEKDV >gi|229269867|gb|GG666044.1| GENE 510 541865 - 542170 339 101 aa, chain + ## HITS:1 COG:no KEGG:Apre_0007 NR:ns ## KEGG: Apre_0007 # Name: not_defined # Def: anti-sigma-factor antagonist # Organism: A.prevotii # Pathway: not_defined # 1 100 1 100 101 110 67.0 1e-23 MFESKIYDKDKFLLVELKGDLDIYAEDEFRSFIEKEIEPVDKDLLIDIKDLDYLDSTGLG LFMKIYKISQARAKSVSIINPKENILKLFKITDLTEVFNME >gi|229269867|gb|GG666044.1| GENE 511 542173 - 542514 400 113 aa, chain + ## HITS:1 COG:no KEGG:Apre_0008 NR:ns ## KEGG: Apre_0008 # Name: not_defined # Def: putative anti-sigma regulatory factor, serine/threonine protein kinase # Organism: A.prevotii # Pathway: not_defined # 1 109 1 109 111 104 50.0 1e-21 MDKISIKIPANKKYQKSIRLFVAGLGSEMGFDIEQIEDLKVLVSEAINYKMGEEGLNLAF LVGDESLSLEVVGKDKNEDARAIAMRDAILSALADEIATEGDLLRITMRKTHA >gi|229269867|gb|GG666044.1| GENE 512 542507 - 543283 942 258 aa, chain + ## HITS:1 COG:BH0529 KEGG:ns NR:ns ## COG: BH0529 COG1191 # Protein_GI_number: 15613092 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit # Organism: Bacillus halodurans # 8 248 9 249 261 160 38.0 1e-39 MPKPNASKEYKEEIEKKFEEFHKTRDKKLRDELIEEHLYIVDILSNKYVGKGIEKDDLYQ VASLGLINAVDRYDPSKGYAFSSFATPTIMGEIKRYFRDKGWVIKVPRRIQNLYKKINVA KKVLPQELQRVPTIADIADYLGEDEETILETMEASKVYTPQSLDMKYSVQKGENAIDLAE IIGEEDKNFDSVELKDLIEKSKERLTDLEKEILELRYYEGRTQVDIAESLDISQMTVSRI EKKILNKFSLEFDRSADK >gi|229269867|gb|GG666044.1| GENE 513 543496 - 544671 1433 391 aa, chain + ## HITS:1 COG:CAC3298 KEGG:ns NR:ns ## COG: CAC3298 COG1979 # Protein_GI_number: 15896542 # Func_class: C Energy production and conversion # Function: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family # Organism: Clostridium acetobutylicum # 1 387 1 385 390 407 50.0 1e-113 MNNFTYDIGTKIHFGTDALDYIGEEAKKYADKILLTYGGGSIKKNGVYDKVIKELEGAGI EVFELSGIQPNPRIDSVREGVRILKENGIGAILAVGGGSTIDASKFMAAGACADFDPWKF ISEKRPMSPAIPLLSVLTMAATGSEMDCGGVITNPETKEKLSSGHADTRPKVSFLNPELT YTVSKFQTAAGSADILSHIFETYFNIDGTMFMLDRIMEALMKTVIKYGPIAIKDPENYEA RANLMWASSWAINDFISDSSQAAWTVHPIEHELSAFYDITHGLGLAILTPRWMEYCLSEK TVHKFVDLGVNVFDLDKDQEPMEIARQTIEKVKKFFFEDLGLDSNLRKVGIDERHFDEMS KKACGKAGVKKGFIDLRPEDVKKIYEMCLED >gi|229269867|gb|GG666044.1| GENE 514 544691 - 544990 283 99 aa, chain + ## HITS:1 COG:no KEGG:Apre_0011 NR:ns ## KEGG: Apre_0011 # Name: not_defined # Def: cupin 2 conserved barrel domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 99 1 99 99 94 50.0 1e-18 MKIYNIFDKLEFSEDREIEEIIFENEKIKMIRISSLNQVTDYYDQDQLEIVKIVRGRATL EIEGELVNLKEGDILPIHPHQVHRVISQDKTVWLCIFVK >gi|229269867|gb|GG666044.1| GENE 515 545080 - 546405 1480 441 aa, chain + ## HITS:1 COG:CAC1531 KEGG:ns NR:ns ## COG: CAC1531 COG2461 # Protein_GI_number: 15894809 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 81 441 11 402 405 169 31.0 9e-42 MQIDINKVVYDLIKDNDKLKADLISLGFTGLKNPLMVKSLAKKVSLKRGAKMMGLSDYKE KLEALGYELCDSSQNPEALKRKDLIKSYLSRLSKGEDLEKVKADFKKNFEGVSSAEIMAA EEDLLASGIDKEEVRKLCDVHSALFHGSTETESKETTYEPGSFLAYFSKENDEVKKILER AKKSIENDKELGDEIYKVFKHYRKKGDLIYPILKAKYNSPGPSDVMWAVDIEIANNIKKA IKLGKKDLLLESIKRAEEMTYKEENILYPLVFEKMSDDDLRLLYKDLGDYDHDLVAYETL EKSKSTSYEDGYINFSKGKMRVDQLEAMLDTLEIEITFVDENDISSYYNNHKGKKVFKRP ESSLGREVYYCHPPQVEPIVRNLIGEFKAGKKDSFRIVKNIKGSDFAITYYAVRDKEGVY KGVLETVQDLSFYRDYLANKK >gi|229269867|gb|GG666044.1| GENE 516 546504 - 547544 1464 346 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485769|ref|ZP_03916085.1| ## NR: gi|227485769|ref|ZP_03916085.1| hypothetical protein HMPREF0072_1172 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1172 [Anaerococcus lactolyticus ATCC 51172] # 1 346 1 346 346 533 100.0 1e-150 MICKKCGHDNIDEAKVCEACGESLVEDNKNQKIKISKEESQKRTQRQKKRSQDRDLMTYG LILGSVMAFAVIFIVLSYFFKLGADREMAKNTQVEESSQDNTDLYEKALKTSEENIKNKE YEKAIKILKKIPEDAEDFYKKGQEKLGQIEDLVIEDIKKAVGEKDYKEARNLANTYADLM PESKTLAKIKDKLKADNKDINNLDAEKEDEKETSEKENGDEKESESEAKNDKTDEKLDAK EARANRRALAEKYDLEQLRATNSYGQNGNPAYTDIYKEADFLNKDLKIDANMGEVRTEPN LNSGVAAYVNNGEKVHCEEVVNDGGRYWLKIEKGWISSKLITGEFR >gi|229269867|gb|GG666044.1| GENE 517 547714 - 548874 838 386 aa, chain + ## HITS:1 COG:NMA1791 KEGG:ns NR:ns ## COG: NMA1791 COG1002 # Protein_GI_number: 15794682 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Neisseria meningitidis Z2491 # 107 368 1 252 803 143 33.0 6e-34 MENVLGVEDPYSYIEFESRIKLDNTSFIDGYIEATHVLIEQKSSNKDLKKPIIQSDGTKL SPFQQAKRYSIELPYSQRPRWIITCNFKEFFIYDMEKPNAEAEIIKLEDLENEVYRLNFI VSEEEDFIKRETQISIDAGEIVASLYDALLREYQHPENEATLHSLNILCVRLVFCLYAED AGLFGNKNMFHDYLNKYKDSNPRAALINLFRILNQKEEDRDPYEDKDLLAFPYVNGGLFA DMDVEIPRLNPNIVDIILNRASLDFDWSKISPTIFGSVFESTLNPETRRSGGMHYTSIKN IHKVIDPLFLDNLKEEFEEIKEIDQVKQKNQRLEDLHNKIANLTFLDPAAGFRVIIVIEA NSYVNIRSSRLLPKFKTQKINSWCAA >gi|229269867|gb|GG666044.1| GENE 518 549030 - 549266 266 78 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0865 NR:ns ## KEGG: SPAP_0865 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 78 1 78 257 145 98.0 4e-34 MNFDYFYNRQSEMYNFIRLPMVLMEDEIFESISIEAKVLYSYMLNRMGLSYKNGWIDEDG KVFIYYTIESIKDQFNCA >gi|229269867|gb|GG666044.1| GENE 519 550029 - 550418 340 129 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 1 121 156 277 282 64 34.0 4e-11 MNLSQVINQIQKSAFKVDSNEIISNLSNIPLLILDDLGIERDTSYAREQVYNIINSRYLK GRPTIFTTNLSLEIIQNPNIELEYQRIYSRILEMTIPVKVTGEDFRRKIHQEKLRKYKEL LLYGGGIDD >gi|229269867|gb|GG666044.1| GENE 520 550862 - 551371 345 169 aa, chain + ## HITS:1 COG:SPy0980_2 KEGG:ns NR:ns ## COG: SPy0980_2 COG3645 # Protein_GI_number: 15674990 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pyogenes M1 GAS # 64 161 27 124 125 110 58.0 8e-25 MYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAGQEKKTNEELLADAILVANRIIAE REEENEVLRPKADYYDKLVDYNLLTNFRNTAKELGIPQNQFIRFLMDKGLIYRDKKKKLL PYADKNKGYFEVKEWVDPLGTLVGIQTFITPKGRHYLLILLDSEGFYDE >gi|229269867|gb|GG666044.1| GENE 521 551364 - 552351 820 329 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 81 327 84 322 591 104 29.0 2e-22 MNKILEAILSDIKNLIKIDNPKKFILSNIPYLSFFYIGNIFSKHINSYVGGDIIDRLMVG ISDIGTLSYIPSLNPRDLLVGISVAALVKLIVYSKGKNKKKYRQGKEYGSARWGESKDIA PYIDPKFENNVLITNTERLTMNSRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHS SYVVTDPKGTLVLECGKMLYENGYDIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTII ANTKGDGEKAGEDFWVKAEKLYYTALIGYIYYEAPEEEKNFKTLLDMIDASEVREDDETY MNPIDRLFEALEKKDPSHFAVKQYKKYKL Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:05:54 2011 Seq name: gi|229269866|gb|GG666045.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD2, whole genome shotgun sequence Length of sequence - 430278 bp Number of predicted genes - 417, with homology - 416 Number of transcription units - 131, operones - 75 average op.length - 4.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 59 - 982 882 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member + Prom 2410 - 2469 7.9 2 2 Op 1 . + CDS 2597 - 3670 433 ## PROTEIN SUPPORTED gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 + Term 3688 - 3724 -0.1 3 2 Op 2 . + CDS 3742 - 4455 637 ## FMG_0972 putative replisome organizer + Prom 4465 - 4524 4.0 4 3 Tu 1 . + CDS 4610 - 4795 282 ## gi|227484724|ref|ZP_03915040.1| conserved hypothetical protein + Prom 5416 - 5475 80.4 5 4 Op 1 . + CDS 5641 - 5916 355 ## Apre_1806 hypothetical protein + Term 5933 - 5972 3.5 + Prom 5940 - 5999 8.2 6 4 Op 2 . + CDS 6105 - 6416 572 ## HMPREF9243_0143 hypothetical protein 7 4 Op 3 . + CDS 6418 - 6633 412 ## SPAP_0876 hypothetical protein 8 4 Op 4 . + CDS 6644 - 7507 828 ## FMG_0963 hypothetical protein 9 4 Op 5 . + CDS 7517 - 7807 382 ## FMG_0962 hypothetical protein 10 4 Op 6 . + CDS 7809 - 8219 351 ## MGAS10750_Spy1689 hypothetical protein 11 4 Op 7 . + CDS 8110 - 10533 2005 ## COG3451 Type IV secretory pathway, VirB4 components 12 4 Op 8 . + CDS 10541 - 13120 2232 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 13 4 Op 9 . + CDS 13135 - 13374 161 ## SPAP_0882 hypothetical protein 14 4 Op 10 . + CDS 13361 - 13954 706 ## Apre_1818 copper amine oxidase domain-containing protein 15 5 Op 1 . + CDS 14595 - 14990 540 ## FMG_0957 putative bacteriocin 16 5 Op 2 . + CDS 15064 - 15675 677 ## Apre_1820 hypothetical protein 17 5 Op 3 . + CDS 15668 - 16651 835 ## Apre_1821 hypothetical protein + Term 16696 - 16731 5.1 + Prom 16660 - 16719 3.7 18 6 Op 1 1/0.111 + CDS 16743 - 18464 1497 ## COG0550 Topoisomerase IA 19 6 Op 2 . + CDS 18457 - 19422 764 ## COG0270 Site-specific DNA methylase 20 6 Op 3 . + CDS 19409 - 27052 6879 ## COG4646 DNA methylase + Term 27054 - 27085 2.0 21 6 Op 4 . + CDS 27096 - 27752 776 ## MGAS10750_Spy1699 hypothetical protein + Term 27758 - 27787 2.1 + Prom 27973 - 28032 7.6 22 7 Op 1 . + CDS 28109 - 28273 129 ## Ethha_1845 hypothetical protein + Prom 28288 - 28347 6.5 23 7 Op 2 . + CDS 28370 - 28840 437 ## Apre_1828 hypothetical protein 24 7 Op 3 . + CDS 28863 - 29384 210 ## Apre_1829 hypothetical protein 25 7 Op 4 . + CDS 29387 - 29611 200 ## PROTEIN SUPPORTED gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 26 7 Op 5 . + CDS 29692 - 29964 276 ## COG3077 DNA-damage-inducible protein J + Term 30197 - 30240 2.1 + Prom 30763 - 30822 9.1 27 8 Op 1 40/0.000 + CDS 30888 - 31571 565 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 28 8 Op 2 . + CDS 31648 - 32610 603 ## COG0642 Signal transduction histidine kinase + Term 32617 - 32664 11.4 29 9 Op 1 . + CDS 33004 - 33318 396 ## SPH_1425 conjugative transposon protein 30 9 Op 2 . + CDS 33337 - 33720 388 ## SPSINT_2122 hypothetical protein + Prom 33951 - 34010 3.4 31 10 Tu 1 . + CDS 34043 - 35134 450 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Term 35228 - 35274 1.7 32 11 Op 1 . + CDS 35975 - 36517 203 ## COG2946 Putative phage replication protein RstA 33 11 Op 2 . + CDS 36560 - 36781 191 ## SPG_1238 Tn5251 hypothetical protein 34 12 Tu 1 . + CDS 36898 - 37395 532 ## SPG_1237 Tn5251 hypothetical protein + Term 37397 - 37434 3.1 + Prom 37455 - 37514 3.8 35 13 Op 1 . + CDS 37583 - 37876 226 ## SSU98_0933 hypothetical protein 36 13 Op 2 . + CDS 37860 - 40307 868 ## SPCG_0166 hypothetical protein 37 13 Op 3 . + CDS 40376 - 42487 671 ## SPSINT_2115 hypothetical membrane protein 38 13 Op 4 . + CDS 42484 - 43485 181 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 39 13 Op 5 . + CDS 43500 - 44417 802 ## SPCG_0169 hypothetical protein + Term 44427 - 44471 -0.7 + Prom 44803 - 44862 80.4 40 14 Tu 1 . + CDS 44915 - 46834 381 ## COG0480 Translation elongation factors (GTPases) - Term 47096 - 47159 11.1 41 15 Tu 1 . - CDS 47180 - 47533 280 ## SPH_1408 transcriptional regulator, putative - Prom 47596 - 47655 8.4 + Prom 47806 - 47865 4.9 42 16 Op 1 . + CDS 48038 - 48460 297 ## SAG0919 Tn916 hypothetical protein 43 16 Op 2 . + CDS 48457 - 48687 136 ## SPH_1405 hypothetical protein + Term 48730 - 48758 -1.0 + Prom 48921 - 48980 4.3 44 17 Op 1 . + CDS 49144 - 49347 229 ## SPH_1403 hypothetical protein 45 17 Op 2 1/0.111 + CDS 49429 - 50646 918 ## COG0582 Integrase + Prom 50762 - 50821 10.3 46 18 Op 1 . + CDS 50989 - 51876 651 ## COG1131 ABC-type multidrug transport system, ATPase component 47 18 Op 2 . + CDS 51878 - 53152 699 ## Apre_1836 hypothetical protein 48 18 Op 3 . + CDS 53118 - 53408 361 ## Apre_1837 radical SAM domain-containing protein + Term 53468 - 53531 9.4 + Prom 53469 - 53528 4.4 49 19 Op 1 . + CDS 53578 - 54807 544 ## Apre_1839 hypothetical protein 50 19 Op 2 . + CDS 54838 - 55164 156 ## Apre_1840 ABC transporter-like protein + Prom 55173 - 55232 5.2 51 20 Tu 1 . + CDS 55269 - 55790 153 ## COG4767 Glycopeptide antibiotics resistance protein + Term 55799 - 55863 9.9 - Term 55785 - 55851 17.3 52 21 Tu 1 . - CDS 55937 - 57022 685 ## SPAP_0900 type IV secretory pathway, VirD2 components (relaxase) - Prom 57043 - 57102 76.3 + Prom 59431 - 59490 76.3 53 22 Op 1 . + CDS 59602 - 60198 477 ## FMG_1417 TetR/AcrR family transcriptional regulator 54 22 Op 2 35/0.000 + CDS 60203 - 61921 226 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 55 22 Op 3 . + CDS 61914 - 63650 221 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 63693 - 63736 5.0 + Prom 63960 - 64019 6.8 56 23 Tu 1 . + CDS 64052 - 64666 378 ## COG1309 Transcriptional regulator + Term 64690 - 64736 11.3 + Prom 64668 - 64727 3.5 57 24 Op 1 35/0.000 + CDS 64774 - 66543 220 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 58 24 Op 2 . + CDS 66540 - 68264 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 59 24 Op 3 . + CDS 68290 - 68880 612 ## Olsu_0225 hypothetical protein 60 24 Op 4 34/0.000 + CDS 68880 - 69608 209 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 61 24 Op 5 . + CDS 69605 - 70996 219 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 71114 - 71155 6.8 62 25 Tu 1 . - CDS 71669 - 72844 756 ## COG3547 Transposase and inactivated derivatives + Prom 73152 - 73211 4.3 63 26 Tu 1 . + CDS 73232 - 73630 139 ## gi|227484788|ref|ZP_03915104.1| hypothetical protein HMPREF0072_0191 + Term 73636 - 73680 1.2 + Prom 73652 - 73711 7.3 64 27 Tu 1 . + CDS 73749 - 74090 322 ## COG1918 Fe2+ transport system protein A + Prom 74198 - 74257 6.2 65 28 Op 1 . + CDS 74291 - 74686 320 ## TDE1508 hypothetical protein 66 28 Op 2 . + CDS 74686 - 75363 301 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 67 28 Op 3 5/0.000 + CDS 75366 - 76703 1418 ## COG0672 High-affinity Fe2+/Pb2+ permease 68 28 Op 4 3/0.037 + CDS 76713 - 77396 907 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 69 28 Op 5 4/0.000 + CDS 77433 - 78716 964 ## COG4393 Predicted membrane protein 70 28 Op 6 10/0.000 + CDS 78725 - 80008 1010 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 71 28 Op 7 36/0.000 + CDS 79998 - 81146 1021 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 72 28 Op 8 1/0.111 + CDS 81158 - 81877 306 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 73 28 Op 9 . + CDS 81874 - 82299 564 ## COG4939 Major membrane immunogen, membrane-anchored lipoprotein 74 29 Tu 1 . + CDS 82407 - 83501 779 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 83525 - 83563 4.0 75 30 Op 1 23/0.000 - CDS 83683 - 83985 189 ## COG2801 Transposase and inactivated derivatives - Prom 84074 - 84133 2.4 76 30 Op 2 . - CDS 84180 - 84719 409 ## COG2963 Transposase and inactivated derivatives 77 30 Op 3 . - CDS 84683 - 84907 102 ## gi|227484802|ref|ZP_03915118.1| hypothetical protein HMPREF0072_0205 - Prom 85145 - 85204 7.1 - Term 85137 - 85178 0.1 78 31 Tu 1 . - CDS 85208 - 86200 572 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 86274 - 86333 9.0 + Prom 86233 - 86292 7.8 79 32 Op 1 35/0.000 + CDS 86361 - 88115 194 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 80 32 Op 2 . + CDS 88099 - 89820 1616 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 81 32 Op 3 . + CDS 89831 - 90412 625 ## FMG_1400 hypothetical protein 82 32 Op 4 34/0.000 + CDS 90412 - 91101 333 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 83 32 Op 5 . + CDS 91095 - 92459 223 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 92539 - 92580 -0.6 + Prom 93514 - 93573 10.0 84 33 Op 1 16/0.000 + CDS 93595 - 94155 544 ## COG2371 Urease accessory protein UreE 85 33 Op 2 17/0.000 + CDS 94085 - 94852 602 ## COG0830 Urease accessory protein UreF 86 33 Op 3 9/0.000 + CDS 94861 - 95472 865 ## COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 87 33 Op 4 8/0.000 + CDS 95472 - 96287 686 ## COG0829 Urease accessory protein UreH 88 33 Op 5 13/0.000 + CDS 96278 - 96580 398 ## COG0831 Urea amidohydrolase (urease) gamma subunit 89 33 Op 6 17/0.000 + CDS 96590 - 96973 598 ## COG0832 Urea amidohydrolase (urease) beta subunit 90 33 Op 7 . + CDS 96974 - 98695 2127 ## COG0804 Urea amidohydrolase (urease) alpha subunit + Term 98718 - 98764 0.4 + Prom 98880 - 98939 6.1 91 34 Tu 1 . + CDS 98997 - 100022 872 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 100044 - 100082 2.1 + Prom 100160 - 100219 7.2 92 35 Tu 1 . + CDS 100436 - 101056 570 ## COG0500 SAM-dependent methyltransferases 93 36 Tu 1 . - CDS 101114 - 101290 90 ## gi|227484818|ref|ZP_03915134.1| hypothetical protein HMPREF0072_0221 - Prom 101497 - 101556 11.6 + Prom 101337 - 101396 6.9 94 37 Op 1 . + CDS 101479 - 102285 780 ## Apre_0733 hypothetical protein 95 37 Op 2 . + CDS 102282 - 102683 483 ## Apre_0734 HIRAN 96 37 Op 3 . + CDS 102690 - 103295 520 ## Apre_0735 hypothetical protein + Term 103327 - 103376 1.2 + Prom 103370 - 103429 8.7 97 38 Op 1 . + CDS 103460 - 103672 123 ## COG1476 Predicted transcriptional regulators 98 38 Op 2 . + CDS 103656 - 104054 332 ## HMPREF0424_0516 hypothetical protein + Term 104101 - 104149 8.4 + Prom 104141 - 104200 6.2 99 39 Op 1 . + CDS 104239 - 105483 784 ## gi|227484824|ref|ZP_03915140.1| hypothetical protein HMPREF0072_0227 100 39 Op 2 . + CDS 105483 - 105794 437 ## Clocel_3823 transcriptional regulator PadR family protein + Term 105805 - 105851 7.2 + Prom 105840 - 105899 7.3 101 40 Op 1 . + CDS 106008 - 106889 602 ## COG0657 Esterase/lipase 102 40 Op 2 . + CDS 106940 - 107419 297 ## HMPREF0573_11544 hypothetical protein 103 40 Op 3 . + CDS 107459 - 108202 654 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 104 40 Op 4 . + CDS 108245 - 108682 122 ## HMPREF0868_0373 GNAT family acetyltransferase + Term 108686 - 108720 2.2 + Prom 108684 - 108743 4.4 105 41 Op 1 40/0.000 + CDS 108766 - 109416 576 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 106 41 Op 2 4/0.000 + CDS 109417 - 110277 705 ## COG0642 Signal transduction histidine kinase 107 41 Op 3 36/0.000 + CDS 110329 - 111009 337 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 108 41 Op 4 . + CDS 111002 - 113434 1529 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 113440 - 113482 4.0 + Prom 113452 - 113511 9.7 109 42 Tu 1 . + CDS 113567 - 113941 307 ## gi|227484835|ref|ZP_03915151.1| hypothetical protein HMPREF0072_0238 + Prom 113972 - 114031 6.7 110 43 Op 1 . + CDS 114062 - 114589 345 ## HMPREF9243_1928 hypothetical protein 111 43 Op 2 . + CDS 114631 - 115398 771 ## COG0551 Zn-finger domain associated with topoisomerase type I 112 43 Op 3 . + CDS 115410 - 116276 618 ## gi|227484838|ref|ZP_03915154.1| hypothetical protein HMPREF0072_0241 + Term 116358 - 116405 7.2 + Prom 116292 - 116351 5.3 113 44 Op 1 . + CDS 116416 - 117618 1293 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters 114 44 Op 2 . + CDS 117652 - 118425 827 ## COG1351 Predicted alternative thymidylate synthase 115 44 Op 3 36/0.000 + CDS 118500 - 119201 329 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 116 44 Op 4 . + CDS 119203 - 122493 3172 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 122494 - 122529 4.4 + Prom 122495 - 122554 7.8 117 45 Op 1 . + CDS 122574 - 123143 504 ## COG0406 Fructose-2,6-bisphosphatase 118 45 Op 2 5/0.000 + CDS 123140 - 124153 735 ## COG0420 DNA repair exonuclease 119 45 Op 3 . + CDS 124125 - 125960 1376 ## COG4717 Uncharacterized conserved protein 120 45 Op 4 . + CDS 125957 - 126637 381 ## COG1768 Predicted phosphohydrolase 121 45 Op 5 . + CDS 126637 - 127161 658 ## COG1437 Adenylate cyclase, class 2 (thermophilic) 122 45 Op 6 19/0.000 + CDS 127215 - 128141 963 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 123 45 Op 7 . + CDS 128134 - 128562 585 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 124 45 Op 8 . + CDS 128565 - 129758 1194 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 125 45 Op 9 1/0.111 + CDS 129742 - 130605 1180 ## COG0284 Orotidine-5'-phosphate decarboxylase 126 45 Op 10 13/0.000 + CDS 130592 - 131311 886 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 127 45 Op 11 1/0.111 + CDS 131308 - 132207 1060 ## COG0167 Dihydroorotate dehydrogenase 128 45 Op 12 . + CDS 132216 - 132794 685 ## COG0461 Orotate phosphoribosyltransferase 129 45 Op 13 . + CDS 132854 - 133570 738 ## Apre_0787 mannosyl-glycoproteinendo-beta-N-acetylglucosamidase 130 45 Op 14 . + CDS 133585 - 135240 1304 ## COG0296 1,4-alpha-glucan branching enzyme + Term 135242 - 135310 5.3 131 46 Tu 1 . - CDS 135278 - 135691 439 ## COG0517 FOG: CBS domain - Prom 135765 - 135824 10.0 - TRNA 136100 - 136191 62.9 # Ser GGA 0 0 + Prom 136150 - 136209 3.5 132 47 Op 1 30/0.000 + CDS 136295 - 137977 1487 ## COG2812 DNA polymerase III, gamma/tau subunits 133 47 Op 2 23/0.000 + CDS 137987 - 138322 183 ## PROTEIN SUPPORTED gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 134 47 Op 3 . + CDS 138322 - 138927 592 ## COG0353 Recombinational DNA repair protein (RecF pathway) 135 47 Op 4 . + CDS 138920 - 139921 674 ## Apre_0793 hypothetical protein + Term 139946 - 140005 17.0 136 48 Op 1 . - CDS 139901 - 140125 102 ## gi|227484862|ref|ZP_03915178.1| hypothetical protein HMPREF0072_0265 137 48 Op 2 . - CDS 140201 - 141334 535 ## COG0582 Integrase - Prom 141381 - 141440 10.4 - Term 141378 - 141419 1.6 138 49 Tu 1 . - CDS 141514 - 141861 327 ## Smon_0909 transcriptional regulator, XRE family - Prom 141883 - 141942 8.1 + Prom 141912 - 141971 9.2 139 50 Tu 1 . + CDS 141994 - 142167 183 ## gi|227484865|ref|ZP_03915181.1| hypothetical protein HMPREF0072_0268 140 51 Tu 1 . + CDS 142283 - 142516 238 ## gi|227484866|ref|ZP_03915182.1| hypothetical protein HMPREF0072_0269 141 52 Tu 1 . - CDS 142643 - 142993 483 ## Smon_0909 transcriptional regulator, XRE family - Prom 143024 - 143083 9.1 + Prom 142970 - 143029 8.6 142 53 Tu 1 . + CDS 143132 - 143281 159 ## + Prom 143289 - 143348 7.0 143 54 Op 1 . + CDS 143407 - 143622 186 ## gi|227484870|ref|ZP_03915186.1| hypothetical protein HMPREF0072_0273 144 54 Op 2 . + CDS 143631 - 143930 290 ## gi|227484871|ref|ZP_03915187.1| hypothetical protein HMPREF0072_0274 145 54 Op 3 . + CDS 143914 - 144123 95 ## gi|227484872|ref|ZP_03915188.1| hypothetical protein HMPREF0072_0275 146 54 Op 4 . + CDS 144139 - 145092 590 ## Amet_3992 replication initiator A domain-containing protein 147 54 Op 5 . + CDS 145104 - 145364 253 ## gi|227484874|ref|ZP_03915190.1| hypothetical protein HMPREF0072_0277 + Prom 145397 - 145456 5.1 148 55 Op 1 . + CDS 145477 - 146196 635 ## Amet_0452 heat shock protein DnaJ domain-containing protein 149 55 Op 2 . + CDS 146209 - 147066 923 ## gi|227484876|ref|ZP_03915192.1| hypothetical protein HMPREF0072_0279 + Term 147072 - 147103 2.1 + Prom 147116 - 147175 11.5 150 56 Op 1 . + CDS 147299 - 148045 597 ## gi|227484877|ref|ZP_03915193.1| hypothetical protein HMPREF0072_0280 151 56 Op 2 . + CDS 148038 - 149039 980 ## gi|227484878|ref|ZP_03915194.1| conserved hypothetical protein 152 56 Op 3 . + CDS 149033 - 149341 397 ## gi|227484879|ref|ZP_03915195.1| hypothetical protein HMPREF0072_0282 153 56 Op 4 . + CDS 149310 - 150527 1074 ## gi|227484880|ref|ZP_03915196.1| conserved hypothetical protein 154 56 Op 5 . + CDS 150517 - 150774 332 ## gi|227484881|ref|ZP_03915197.1| hypothetical protein HMPREF0072_0284 + Prom 150783 - 150842 5.7 155 57 Tu 1 . + CDS 150905 - 152767 2682 ## gi|227484882|ref|ZP_03915198.1| viral A family inclusion protein + Prom 152841 - 152900 80.4 156 58 Op 1 . + CDS 153119 - 153364 266 ## gi|227484883|ref|ZP_03915199.1| hypothetical protein HMPREF0072_0286 157 58 Op 2 . + CDS 153387 - 155426 1892 ## COG0550 Topoisomerase IA 158 58 Op 3 . + CDS 155438 - 156553 947 ## gi|227484885|ref|ZP_03915201.1| hypothetical protein HMPREF0072_0288 159 58 Op 4 . + CDS 156550 - 158589 1332 ## COG3505 Type IV secretory pathway, VirD4 components 160 58 Op 5 . + CDS 158606 - 158977 390 ## gi|227484887|ref|ZP_03915203.1| hypothetical protein HMPREF0072_0290 161 58 Op 6 . + CDS 158991 - 159983 876 ## gi|227484888|ref|ZP_03915204.1| hypothetical protein HMPREF0072_0291 162 58 Op 7 . + CDS 159984 - 160472 376 ## gi|227484889|ref|ZP_03915205.1| hypothetical protein HMPREF0072_0292 163 58 Op 8 . + CDS 160478 - 163864 2478 ## COG3451 Type IV secretory pathway, VirB4 components 164 58 Op 9 . + CDS 163930 - 164991 622 ## gi|227484891|ref|ZP_03915207.1| hypothetical protein HMPREF0072_0294 165 58 Op 10 . + CDS 164975 - 165547 523 ## gi|227484892|ref|ZP_03915208.1| hypothetical protein HMPREF0072_0295 166 58 Op 11 . + CDS 165559 - 166011 454 ## gi|227484893|ref|ZP_03915209.1| possible single-strand DNA binding protein + Prom 166014 - 166073 4.4 167 59 Op 1 . + CDS 166095 - 167258 759 ## ELI_1911 hypothetical protein 168 59 Op 2 . + CDS 167255 - 168037 560 ## COG3177 Uncharacterized conserved protein + Term 168277 - 168322 2.3 + Prom 168208 - 168267 8.2 169 60 Tu 1 . + CDS 168336 - 168701 306 ## BLLJ_1039 endonuclease + Term 168704 - 168748 7.9 + Prom 168754 - 168813 10.5 170 61 Op 1 . + CDS 168869 - 169438 696 ## gi|227484897|ref|ZP_03915213.1| hypothetical protein HMPREF0072_0300 + Term 169449 - 169489 3.1 + Prom 169441 - 169500 4.2 171 61 Op 2 . + CDS 169522 - 170442 1141 ## gi|227484898|ref|ZP_03915214.1| hypothetical protein HMPREF0072_0301 172 61 Op 3 . + CDS 170451 - 172331 1817 ## gi|227484899|ref|ZP_03915215.1| possible exonuclease SBCC + Term 172336 - 172367 3.4 173 61 Op 4 . + CDS 172373 - 173518 992 ## gi|227484900|ref|ZP_03915216.1| hypothetical protein HMPREF0072_0303 + Prom 173853 - 173912 8.0 174 62 Op 1 . + CDS 173992 - 174285 318 ## gi|227484901|ref|ZP_03915217.1| hypothetical protein HMPREF0072_0304 175 62 Op 2 . + CDS 174276 - 175913 1049 ## gi|227484902|ref|ZP_03915218.1| conserved hypothetical protein 176 62 Op 3 . + CDS 175917 - 178142 1475 ## BLA_0575 secreted protein + Prom 178144 - 178203 4.6 177 62 Op 4 . + CDS 178228 - 179055 952 ## gi|227484904|ref|ZP_03915220.1| hypothetical protein HMPREF0072_0307 + Term 179288 - 179333 9.7 - Term 179281 - 179314 4.5 178 63 Tu 1 . - CDS 179426 - 180043 312 ## gi|227484905|ref|ZP_03915221.1| hypothetical protein HMPREF0072_0308 - Prom 180071 - 180130 5.5 + Prom 180614 - 180673 9.4 179 64 Op 1 7/0.000 + CDS 180752 - 181885 1044 ## COG0448 ADP-glucose pyrophosphorylase 180 64 Op 2 17/0.000 + CDS 181887 - 183014 1087 ## COG0448 ADP-glucose pyrophosphorylase 181 64 Op 3 10/0.000 + CDS 183014 - 184444 1478 ## COG0297 Glycogen synthase 182 64 Op 4 . + CDS 184450 - 186690 1754 ## COG0058 Glucan phosphorylase 183 64 Op 5 . + CDS 186692 - 188593 1714 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 184 64 Op 6 . + CDS 188583 - 190277 1951 ## COG1109 Phosphomannomutase + Term 190293 - 190324 1.0 + Prom 190294 - 190353 7.5 185 65 Op 1 1/0.111 + CDS 190379 - 190882 333 ## COG1716 FOG: FHA domain 186 65 Op 2 19/0.000 + CDS 190875 - 192140 849 ## COG0772 Bacterial cell division membrane protein 187 65 Op 3 . + CDS 192130 - 193650 1327 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 + Term 193659 - 193718 4.2 - Term 193556 - 193602 -1.0 188 66 Tu 1 . - CDS 193651 - 194436 591 ## COG0061 Predicted sugar kinase - Prom 194473 - 194532 9.5 + Prom 194389 - 194448 5.7 189 67 Tu 1 . + CDS 194476 - 195318 200 ## PROTEIN SUPPORTED gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family + Prom 195508 - 195567 7.2 190 68 Op 1 . + CDS 195592 - 196200 928 ## Apre_0879 hypothetical protein 191 68 Op 2 . + CDS 196215 - 196658 540 ## Apre_0880 hypothetical protein + Term 196664 - 196694 0.3 192 68 Op 3 . + CDS 196703 - 197707 1204 ## COG1609 Transcriptional regulators 193 68 Op 4 25/0.000 + CDS 197772 - 198032 486 ## COG1925 Phosphotransferase system, HPr-related proteins 194 68 Op 5 . + CDS 198108 - 199814 1941 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 195 68 Op 6 . + CDS 199825 - 200718 951 ## COG3173 Predicted aminoglycoside phosphotransferase + Term 200824 - 200861 2.1 + Prom 200735 - 200794 5.6 196 69 Tu 1 . + CDS 200886 - 201725 981 ## COG1284 Uncharacterized conserved protein + Prom 201735 - 201794 4.4 197 70 Op 1 . + CDS 201829 - 202536 199 ## PROTEIN SUPPORTED gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains 198 70 Op 2 . + CDS 202539 - 203285 815 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 199 70 Op 3 . + CDS 203295 - 204683 879 ## COG2195 Di- and tripeptidases 200 70 Op 4 . + CDS 204680 - 205024 408 ## Apre_0889 hypothetical protein 201 70 Op 5 . + CDS 205028 - 205978 710 ## COG1242 Predicted Fe-S oxidoreductase 202 70 Op 6 . + CDS 205975 - 206403 580 ## Apre_0891 hypothetical protein 203 70 Op 7 . + CDS 206436 - 206981 303 ## Apre_0892 hypothetical protein 204 70 Op 8 . + CDS 206983 - 207969 753 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 205 70 Op 9 . + CDS 207947 - 208846 391 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 206 70 Op 10 40/0.000 + CDS 208839 - 209534 648 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 207 70 Op 11 . + CDS 209525 - 210991 1345 ## COG0642 Signal transduction histidine kinase 208 70 Op 12 . + CDS 210975 - 212459 1234 ## Apre_0897 hypothetical protein 209 70 Op 13 7/0.000 + CDS 212508 - 213104 292 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase 210 70 Op 14 . + CDS 213085 - 213555 445 ## COG0622 Predicted phosphoesterase 211 70 Op 15 . + CDS 213565 - 213975 311 ## Apre_0900 hypothetical protein 212 70 Op 16 . + CDS 213968 - 214705 839 ## COG0560 Phosphoserine phosphatase + Prom 214708 - 214767 7.9 213 71 Op 1 . + CDS 214890 - 215603 492 ## Apre_0902 hypothetical protein 214 71 Op 2 14/0.000 + CDS 215632 - 216126 579 ## COG0817 Holliday junction resolvasome, endonuclease subunit 215 71 Op 3 29/0.000 + CDS 216126 - 216716 769 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 216 71 Op 4 4/0.000 + CDS 216725 - 217732 1079 ## COG2255 Holliday junction resolvasome, helicase subunit 217 71 Op 5 17/0.000 + CDS 217733 - 218755 995 ## COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 218 71 Op 6 . + CDS 218764 - 219882 935 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 219 71 Op 7 . + CDS 219882 - 220142 200 ## gi|227484946|ref|ZP_03915262.1| conserved hypothetical protein 220 71 Op 8 . + CDS 220208 - 221938 1672 ## COG0608 Single-stranded DNA-specific exonuclease 221 71 Op 9 7/0.000 + CDS 221943 - 224123 1853 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 222 71 Op 10 1/0.111 + CDS 224123 - 224572 478 ## COG1490 D-Tyr-tRNAtyr deacylase 223 71 Op 11 . + CDS 224572 - 225174 502 ## COG0491 Zn-dependent hydrolases, including glyoxylases 224 71 Op 12 . + CDS 225186 - 226934 1833 ## COG0173 Aspartyl-tRNA synthetase 225 71 Op 13 . + CDS 226943 - 227359 459 ## Apre_0914 positive regulator of sigma E, RseC/MucC 226 71 Op 14 2/0.074 + CDS 227393 - 228712 1177 ## COG1160 Predicted GTPases 227 71 Op 15 1/0.111 + CDS 228709 - 229287 487 ## COG0344 Predicted membrane protein 228 71 Op 16 . + CDS 229296 - 230279 1133 ## COG0240 Glycerol-3-phosphate dehydrogenase 229 71 Op 17 . + CDS 230343 - 230906 604 ## COG1799 Uncharacterized protein conserved in bacteria 230 71 Op 18 . + CDS 230934 - 231701 1281 ## PROTEIN SUPPORTED gi|227484957|ref|ZP_03915273.1| ribosomal protein S4e 231 71 Op 19 . + CDS 231698 - 232138 308 ## COG0597 Lipoprotein signal peptidase 232 71 Op 20 . + CDS 232125 - 232793 457 ## COG0692 Uracil DNA glycosylase - Term 232623 - 232656 1.4 233 72 Tu 1 . - CDS 232790 - 233698 575 ## COG3359 Predicted exonuclease - Prom 233938 - 233997 6.9 234 73 Op 1 7/0.000 + CDS 233799 - 234908 735 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 235 73 Op 2 . + CDS 234908 - 236071 876 ## COG0301 Thiamine biosynthesis ATP pyrophosphatase 236 73 Op 3 . + CDS 236170 - 236481 524 ## PROTEIN SUPPORTED gi|227484963|ref|ZP_03915279.1| ribosomal protein L21 237 73 Op 4 . + CDS 236481 - 236798 330 ## PROTEIN SUPPORTED gi|228002494|ref|ZP_04049488.1| predicted ribosomal protein 238 73 Op 5 14/0.000 + CDS 236795 - 237076 468 ## PROTEIN SUPPORTED gi|227484965|ref|ZP_03915281.1| ribosomal protein L27 + Term 237092 - 237120 2.3 239 73 Op 6 1/0.111 + CDS 237131 - 238411 1494 ## COG0536 Predicted GTPase 240 73 Op 7 7/0.000 + CDS 238420 - 238704 197 ## PROTEIN SUPPORTED gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 241 73 Op 8 9/0.000 + CDS 238704 - 239300 572 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 242 73 Op 9 6/0.000 + CDS 239293 - 239877 662 ## COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism 243 73 Op 10 . + CDS 239852 - 240160 385 ## COG0799 Uncharacterized homolog of plant Iojap protein 244 73 Op 11 . + CDS 240188 - 240832 701 ## COG1555 DNA uptake protein and related DNA-binding proteins 245 73 Op 12 . + CDS 240841 - 241242 395 ## COG1959 Predicted transcriptional regulator 246 73 Op 13 4/0.000 + CDS 241252 - 243870 2663 ## COG0013 Alanyl-tRNA synthetase 247 73 Op 14 6/0.000 + CDS 243874 - 244134 401 ## COG4472 Uncharacterized protein conserved in bacteria 248 73 Op 15 . + CDS 244127 - 244546 435 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 249 73 Op 16 . + CDS 244539 - 244781 358 ## Apre_0939 hypothetical protein 250 73 Op 17 1/0.111 + CDS 244771 - 245211 415 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 251 73 Op 18 . + CDS 245211 - 246887 1643 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily 252 73 Op 19 4/0.000 + CDS 246874 - 247512 586 ## COG4122 Predicted O-methyltransferase 253 73 Op 20 . + CDS 247502 - 248737 1227 ## COG0826 Collagenase and related proteases 254 74 Op 1 . - CDS 250387 - 250617 336 ## Apre_0944 hypothetical protein 255 74 Op 2 . - CDS 250697 - 251917 1147 ## COG2195 Di- and tripeptidases - Prom 251965 - 252024 8.6 + Prom 251859 - 251918 9.9 256 75 Op 1 . + CDS 251996 - 252430 551 ## COG0756 dUTPase 257 75 Op 2 . + CDS 252436 - 252957 455 ## Apre_0947 hypothetical protein + Term 252959 - 252999 3.0 258 76 Op 1 6/0.000 + CDS 253018 - 255627 2207 ## COG0249 Mismatch repair ATPase (MutS family) 259 76 Op 2 12/0.000 + CDS 255627 - 257390 1434 ## COG0323 DNA mismatch repair enzyme (predicted ATPase) 260 76 Op 3 . + CDS 257380 - 258327 664 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 261 76 Op 4 . + CDS 258317 - 259594 1031 ## COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance + Term 259601 - 259639 5.2 262 77 Tu 1 . - CDS 259635 - 260624 775 ## COG0582 Integrase - Prom 260699 - 260758 8.1 - Term 261054 - 261086 3.3 263 78 Tu 1 . - CDS 261099 - 262652 1579 ## COG1418 Predicted HD superfamily hydrolase - Prom 262706 - 262765 14.2 264 79 Op 1 6/0.000 - CDS 262768 - 263295 534 ## COG1045 Serine acetyltransferase 265 79 Op 2 . - CDS 263282 - 264199 809 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 264274 - 264333 8.8 266 80 Op 1 38/0.000 - CDS 264354 - 265022 1022 ## COG0264 Translation elongation factor Ts 267 80 Op 2 . - CDS 265038 - 265898 1454 ## PROTEIN SUPPORTED gi|227484994|ref|ZP_03915310.1| ribosomal protein S2 268 81 Op 1 . - CDS 266005 - 267408 1406 ## COG0552 Signal recognition particle GTPase 269 81 Op 2 5/0.000 - CDS 267418 - 269682 1609 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase - Prom 269707 - 269766 2.6 270 81 Op 3 . - CDS 269786 - 270958 1079 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 271 81 Op 4 . - CDS 270960 - 271148 131 ## Apre_0961 DNA-directed RNA polymerase, omega subunit 272 81 Op 5 . - CDS 271148 - 271747 578 ## COG0194 Guanylate kinase + Prom 271715 - 271774 8.8 273 82 Tu 1 . + CDS 271841 - 273583 1457 ## COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP + Term 273586 - 273637 4.4 - Term 273573 - 273623 4.2 274 83 Op 1 . - CDS 273641 - 273919 439 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 273939 - 273998 3.1 275 83 Op 2 . - CDS 274000 - 274908 913 ## Apre_0965 hypothetical protein 276 83 Op 3 1/0.111 - CDS 274880 - 275911 1439 ## COG0760 Parvulin-like peptidyl-prolyl isomerase 277 83 Op 4 7/0.000 - CDS 275911 - 279399 2991 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 278 83 Op 5 1/0.111 - CDS 279392 - 279979 556 ## COG0193 Peptidyl-tRNA hydrolase 279 83 Op 6 11/0.000 - CDS 279979 - 280962 970 ## COG0462 Phosphoribosylpyrophosphate synthetase 280 83 Op 7 . - CDS 280965 - 282350 1429 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 281 83 Op 8 . - CDS 282352 - 283071 767 ## COG0813 Purine-nucleoside phosphorylase 282 83 Op 9 . - CDS 283115 - 283558 550 ## COG0698 Ribose 5-phosphate isomerase RpiB - Prom 283653 - 283712 6.0 + Prom 283607 - 283666 11.4 283 84 Tu 1 . + CDS 283707 - 285113 1588 ## COG0773 UDP-N-acetylmuramate-alanine ligase + Term 285139 - 285182 6.3 - Term 285127 - 285170 6.3 284 85 Op 1 . - CDS 285175 - 285525 475 ## COG2337 Growth inhibitor 285 85 Op 2 1/0.111 - CDS 285515 - 286633 896 ## COG0787 Alanine racemase 286 85 Op 3 . - CDS 286636 - 287814 419 ## PROTEIN SUPPORTED gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 - Prom 287858 - 287917 9.0 287 86 Op 1 21/0.000 - CDS 287951 - 289369 1350 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 288 86 Op 2 . - CDS 289359 - 290771 1456 ## COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 289 86 Op 3 . - CDS 290780 - 291058 403 ## Apre_0980 glutamyl-tRNA(Gln) amidotransferase, C subunit 290 86 Op 4 5/0.000 - CDS 291060 - 293063 2037 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 291 86 Op 5 1/0.111 - CDS 293066 - 295261 1969 ## COG0210 Superfamily I DNA and RNA helicases 292 86 Op 6 . - CDS 295317 - 295634 454 ## COG4496 Uncharacterized protein conserved in bacteria 293 86 Op 7 10/0.000 - CDS 295645 - 296217 620 ## COG3442 Predicted glutamine amidotransferase 294 86 Op 8 . - CDS 296283 - 297605 1068 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 295 86 Op 9 . - CDS 297643 - 297912 318 ## COG1254 Acylphosphatases - Prom 297956 - 298015 8.2 + Prom 297912 - 297971 8.8 296 87 Op 1 4/0.000 + CDS 298003 - 300519 2381 ## COG2217 Cation transport ATPase 297 87 Op 2 . + CDS 300524 - 300799 307 ## COG1937 Uncharacterized protein conserved in bacteria + Term 300812 - 300850 0.8 - Term 300800 - 300838 8.4 298 88 Tu 1 . - CDS 300847 - 301347 549 ## COG4708 Predicted membrane protein - Prom 301415 - 301474 13.2 + Prom 301354 - 301413 7.4 299 89 Tu 1 . + CDS 301475 - 302350 728 ## Apre_0991 hypothetical protein + Term 302430 - 302497 30.2 + TRNA 302408 - 302483 94.9 # Lys CTT 0 0 + Prom 302409 - 302468 78.7 300 90 Tu 1 . + CDS 302678 - 303415 816 ## COG4684 Predicted membrane protein + Term 303422 - 303463 5.0 - Term 303408 - 303449 5.0 301 91 Op 1 . - CDS 303454 - 303756 500 ## Apre_0992 hypothetical protein 302 91 Op 2 . - CDS 303746 - 304672 931 ## COG1680 Beta-lactamase class C and other penicillin binding proteins 303 91 Op 3 10/0.000 - CDS 304727 - 305167 631 ## COG0691 tmRNA-binding protein 304 91 Op 4 . - CDS 305148 - 307268 1384 ## PROTEIN SUPPORTED gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 - Term 307288 - 307319 0.1 305 91 Op 5 . - CDS 307321 - 307548 260 ## Apre_0769 preprotein translocase, SecG subunit - Prom 307568 - 307627 9.9 - Term 307607 - 307649 7.2 306 92 Op 1 . - CDS 307659 - 308951 1985 ## COG0148 Enolase 307 92 Op 2 13/0.000 - CDS 308964 - 309716 1041 ## COG0149 Triosephosphate isomerase 308 92 Op 3 26/0.000 - CDS 309727 - 310923 1723 ## COG0126 3-phosphoglycerate kinase - Term 310929 - 310961 4.0 309 92 Op 4 . - CDS 310973 - 311980 1341 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 310 92 Op 5 . - CDS 312048 - 312974 507 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 311 93 Op 1 . - CDS 313439 - 314281 698 ## COG0561 Predicted hydrolases of the HAD superfamily 312 93 Op 2 . - CDS 314274 - 314867 472 ## COG0177 Predicted EndoIII-related endonuclease - Prom 315035 - 315094 6.9 + Prom 314893 - 314952 8.1 313 94 Tu 1 . + CDS 315020 - 316186 1120 ## COG0772 Bacterial cell division membrane protein + Term 316296 - 316362 31.6 - Term 316106 - 316146 3.4 314 95 Op 1 16/0.000 - CDS 316365 - 316991 675 ## COG1394 Archaeal/vacuolar-type H+-ATPase subunit D 315 95 Op 2 16/0.000 - CDS 316984 - 318357 1663 ## COG1156 Archaeal/vacuolar-type H+-ATPase subunit B 316 95 Op 3 . - CDS 318361 - 320103 1792 ## COG1155 Archaeal/vacuolar-type H+-ATPase subunit A 317 95 Op 4 . - CDS 320087 - 320692 561 ## Apre_1012 H+transporting two-sector ATPase E subunit 318 95 Op 5 . - CDS 320704 - 320940 201 ## gi|227485045|ref|ZP_03915361.1| hypothetical protein HMPREF0072_0448 319 95 Op 6 . - CDS 320942 - 321373 718 ## Apre_1014 H+transporting two-sector ATPase C subunit 320 95 Op 7 . - CDS 321385 - 322746 1412 ## COG1269 Archaeal/vacuolar-type H+-ATPase subunit I 321 95 Op 8 . - CDS 322736 - 323629 855 ## Apre_1016 hypothetical protein 322 95 Op 9 . - CDS 323632 - 324612 755 ## Apre_1017 hypothetical protein - Prom 324673 - 324732 4.4 323 96 Tu 1 . - CDS 324749 - 326104 450 ## PROTEIN SUPPORTED gi|229233241|ref|ZP_04357664.1| SSU ribosomal protein S12P methylthiotransferase - Term 326113 - 326146 1.8 324 97 Op 1 1/0.111 - CDS 326161 - 328230 2862 ## PROTEIN SUPPORTED gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P 325 97 Op 2 3/0.037 - CDS 328211 - 328822 502 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 326 97 Op 3 1/0.111 - CDS 328812 - 329465 279 ## PROTEIN SUPPORTED gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 327 97 Op 4 . - CDS 329462 - 330676 894 ## COG2081 Predicted flavoproteins 328 97 Op 5 12/0.000 - CDS 330704 - 331399 775 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 329 97 Op 6 21/0.000 - CDS 331389 - 331913 410 ## COG1386 Predicted transcriptional regulator containing the HTH domain 330 97 Op 7 . - CDS 331910 - 332608 424 ## COG1354 Uncharacterized conserved protein 331 97 Op 8 . - CDS 332598 - 333146 569 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 332 97 Op 9 8/0.000 - CDS 333139 - 334827 1336 ## COG0497 ATPase involved in DNA repair 333 97 Op 10 1/0.111 - CDS 334827 - 335279 448 ## COG1438 Arginine repressor 334 97 Op 11 . - CDS 335288 - 336115 779 ## COG0142 Geranylgeranyl pyrophosphate synthase 335 97 Op 12 . - CDS 336108 - 336293 336 ## gi|227485062|ref|ZP_03915378.1| conserved hypothetical protein 336 97 Op 13 . - CDS 336286 - 337470 910 ## COG1570 Exonuclease VII, large subunit 337 97 Op 14 . - CDS 337467 - 337853 318 ## Apre_1032 NusB antitermination factor 338 97 Op 15 . - CDS 337853 - 338182 475 ## Apre_1033 hypothetical protein 339 97 Op 16 . - CDS 338192 - 338749 832 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 338868 - 338927 9.3 + Prom 338818 - 338877 5.7 340 98 Tu 1 . + CDS 338900 - 340066 735 ## COG1323 Predicted nucleotidyltransferase + Term 340256 - 340290 -0.8 - Term 340039 - 340072 3.1 341 99 Op 1 . - CDS 340079 - 340564 664 ## Apre_1036 hypothetical protein 342 99 Op 2 14/0.000 - CDS 340573 - 341055 352 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 343 99 Op 3 1/0.111 - CDS 341052 - 341597 267 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 344 99 Op 4 4/0.000 - CDS 341594 - 343366 1379 ## COG1200 RecG-like helicase - Prom 343483 - 343542 9.2 345 99 Op 5 9/0.000 - CDS 343578 - 345146 1820 ## COG1461 Predicted kinase related to dihydroxyacetone kinase 346 99 Op 6 . - CDS 345154 - 345507 477 ## COG1302 Uncharacterized protein conserved in bacteria - Prom 345621 - 345680 7.1 - Term 345642 - 345681 2.7 347 100 Tu 1 . - CDS 345691 - 349218 4426 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 349260 - 349319 7.0 - Term 349475 - 349527 8.8 348 101 Tu 1 . - CDS 349528 - 353052 3437 ## COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit - Prom 353112 - 353171 12.5 - Term 353121 - 353161 -1.0 349 102 Op 1 . - CDS 353173 - 354183 1036 ## COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism 350 102 Op 2 . - CDS 354187 - 355974 1408 ## COG0322 Nuclease subunit of the excinuclease complex 351 102 Op 3 . - CDS 356034 - 357803 1616 ## COG0006 Xaa-Pro aminopeptidase - Prom 357946 - 358005 9.2 + Prom 357913 - 357972 11.5 352 103 Op 1 1/0.111 + CDS 358003 - 359100 1432 ## COG0012 Predicted GTPase, probable translation factor 353 103 Op 2 . + CDS 359093 - 359716 699 ## COG1435 Thymidine kinase + Term 359721 - 359750 1.4 - Term 359709 - 359738 1.4 354 104 Op 1 . - CDS 359744 - 360550 753 ## COG0024 Methionine aminopeptidase 355 104 Op 2 . - CDS 360592 - 361401 1026 ## Apre_1049 hypothetical protein - Prom 361590 - 361649 8.1 + Prom 361400 - 361459 7.3 356 105 Tu 1 . + CDS 361486 - 363282 1570 ## COG0210 Superfamily I DNA and RNA helicases - Term 363268 - 363313 4.1 357 106 Tu 1 . - CDS 363326 - 364600 1172 ## COG0285 Folylpolyglutamate synthase + Prom 364579 - 364638 7.5 358 107 Op 1 . + CDS 364663 - 365370 477 ## COG3503 Predicted membrane protein 359 107 Op 2 . + CDS 365453 - 365584 80 ## gi|227485086|ref|ZP_03915402.1| hypothetical protein HMPREF0072_0489 - Term 365613 - 365652 6.1 360 108 Op 1 . - CDS 365658 - 366254 635 ## Apre_1054 hypothetical protein 361 108 Op 2 . - CDS 366311 - 366937 524 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Term 366944 - 366981 2.0 362 108 Op 3 . - CDS 366982 - 367869 803 ## COG1307 Uncharacterized protein conserved in bacteria 363 108 Op 4 1/0.111 - CDS 367920 - 369263 1048 ## COG1114 Branched-chain amino acid permeases 364 108 Op 5 . - CDS 369320 - 369670 451 ## COG1393 Arsenate reductase and related proteins, glutaredoxin family - Prom 369690 - 369749 5.3 365 109 Op 1 . - CDS 369760 - 371538 1024 ## COG2898 Uncharacterized conserved protein 366 109 Op 2 . - CDS 371535 - 372236 418 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) - Prom 372322 - 372381 6.8 + Prom 372243 - 372302 6.6 367 110 Tu 1 . + CDS 372332 - 373699 1771 ## COG0260 Leucyl aminopeptidase + Term 373710 - 373752 4.2 - Term 373693 - 373744 13.3 368 111 Op 1 18/0.000 - CDS 373758 - 374471 295 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 369 111 Op 2 19/0.000 - CDS 374484 - 375275 245 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 370 111 Op 3 24/0.000 - CDS 375259 - 376233 867 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 371 111 Op 4 20/0.000 - CDS 376237 - 377124 871 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 372 111 Op 5 . - CDS 377199 - 378368 1842 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - Term 378780 - 378816 4.2 373 112 Tu 1 . - CDS 378824 - 380149 1510 ## COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) - Prom 380287 - 380346 5.0 - Term 380281 - 380325 2.4 374 113 Tu 1 . - CDS 380372 - 381067 642 ## COG1011 Predicted hydrolase (HAD superfamily) - Prom 381140 - 381199 6.8 + Prom 380883 - 380942 9.5 375 114 Tu 1 . + CDS 381169 - 382230 1258 ## EF1030 endonuclease/exonuclease/phosphatase family protein + Term 382330 - 382369 3.1 376 115 Op 1 . - CDS 382294 - 382779 594 ## HMPREF0868_1336 GNAT family acetyltransferase 377 115 Op 2 . - CDS 382779 - 383198 457 ## HMPREF0868_0260 hypothetical protein 378 115 Op 3 . - CDS 383207 - 383365 106 ## HMPREF0868_0259 Xre family toxin-antitoxin system antitoxin protein 379 115 Op 4 . - CDS 383434 - 383787 278 ## gi|227485106|ref|ZP_03915422.1| hypothetical protein HMPREF0072_0509 - Prom 383831 - 383890 9.9 380 116 Op 1 . - CDS 383904 - 384374 228 ## COG0456 Acetyltransferases 381 116 Op 2 . - CDS 384371 - 385222 723 ## Apre_1219 hypothetical protein 382 116 Op 3 . - CDS 385286 - 385762 556 ## Apre_1097 thioesterase superfamily protein - Prom 385827 - 385886 5.4 - Term 385823 - 385861 4.8 383 117 Tu 1 . - CDS 386089 - 386514 452 ## COG1683 Uncharacterized conserved protein - Prom 386562 - 386621 19.7 + Prom 386584 - 386643 9.9 384 118 Tu 1 . + CDS 386671 - 388059 1479 ## COG0733 Na+-dependent transporters of the SNF family + Term 388065 - 388093 1.4 385 119 Tu 1 . - CDS 388086 - 388508 428 ## gi|227485112|ref|ZP_03915428.1| hypothetical protein HMPREF0072_0515 - Prom 388536 - 388595 7.2 + Prom 388441 - 388500 4.2 386 120 Op 1 . + CDS 388607 - 389662 1293 ## COG1804 Predicted acyl-CoA transferases/carnitine dehydratase + Prom 389670 - 389729 8.8 387 120 Op 2 . + CDS 389749 - 391401 1510 ## COG0513 Superfamily II DNA and RNA helicases + Term 391491 - 391525 -0.5 - Term 391403 - 391448 11.5 388 121 Op 1 . - CDS 391453 - 391773 372 ## Apre_1084 glutaredoxin 389 121 Op 2 . - CDS 391833 - 392270 392 ## gi|227485116|ref|ZP_03915432.1| hypothetical protein HMPREF0072_0519 390 121 Op 3 . - CDS 392277 - 392945 658 ## lhv_1650 hypothetical protein 391 121 Op 4 . - CDS 392942 - 393310 394 ## gi|227485118|ref|ZP_03915434.1| hypothetical protein HMPREF0072_0521 - Prom 393360 - 393419 3.9 392 122 Op 1 . - CDS 393459 - 393866 302 ## HMPREF0424_0945 hypothetical protein 393 122 Op 2 . - CDS 393901 - 394218 267 ## TepRe1_2333 hypothetical protein - Prom 394238 - 394297 6.9 + Prom 394148 - 394207 11.8 394 123 Tu 1 . + CDS 394317 - 395330 1175 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Term 395157 - 395192 -1.0 395 124 Tu 1 . - CDS 395368 - 395619 317 ## gi|227485122|ref|ZP_03915438.1| hypothetical protein HMPREF0072_0525 - Prom 395662 - 395721 4.0 396 125 Op 1 3/0.037 - CDS 395786 - 396208 418 ## COG1321 Mn-dependent transcriptional regulator 397 125 Op 2 10/0.000 - CDS 396198 - 397331 1035 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 398 125 Op 3 42/0.000 - CDS 397315 - 398193 791 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 399 125 Op 4 25/0.000 - CDS 398198 - 398908 252 ## PROTEIN SUPPORTED gi|225084369|ref|YP_002657150.1| ribosomal protein S16 400 125 Op 5 . - CDS 398917 - 399858 1111 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 399896 - 399955 11.8 - Term 399992 - 400055 11.6 401 126 Op 1 . - CDS 400056 - 400940 420 ## FMG_1369 hypothetical protein - Prom 400978 - 401037 9.9 402 126 Op 2 . - CDS 401039 - 403216 1621 ## Swol_2224 hypothetical protein - Prom 403314 - 403373 8.1 403 127 Tu 1 . + CDS 403710 - 405530 1391 ## gi|227485130|ref|ZP_03915446.1| conserved hypothetical protein + Term 405576 - 405611 5.1 404 128 Tu 1 . - CDS 405931 - 408189 1028 ## COG1479 Uncharacterized conserved protein - Prom 408388 - 408447 7.0 - Term 408698 - 408744 0.6 405 129 Op 1 . - CDS 408770 - 409378 435 ## TDE0462 metallo-beta-lactamase family protein - Prom 409418 - 409477 6.6 406 129 Op 2 . - CDS 409480 - 410094 519 ## COG0500 SAM-dependent methyltransferases - Prom 410121 - 410180 9.9 407 130 Op 1 . - CDS 410419 - 418140 5243 ## COG4646 DNA methylase - Term 418159 - 418196 -0.7 408 130 Op 2 . - CDS 418225 - 419652 895 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 409 130 Op 3 . - CDS 419672 - 419851 114 ## SZO_12650 regulatory protein - Prom 419874 - 419933 3.0 410 130 Op 4 . - CDS 419935 - 421641 1284 ## COG0550 Topoisomerase IA - Prom 421676 - 421735 3.9 - Term 421662 - 421699 5.4 411 131 Op 1 . - CDS 421740 - 423929 1920 ## CD1858 putative cell surface protein 412 131 Op 2 . - CDS 423907 - 424143 146 ## SZO_12840 hypothetical protein 413 131 Op 3 . - CDS 424156 - 426315 1474 ## SEQ_0743 membrane protein 414 131 Op 4 . - CDS 426320 - 428749 933 ## COG3451 Type IV secretory pathway, VirB4 components 415 131 Op 5 . - CDS 428661 - 429050 235 ## CD1855 putative conjugative transposon membrane protein 416 131 Op 6 . - CDS 429054 - 429320 294 ## CD1854 putative conjugative transposon membrane exported protein 417 131 Op 7 . - CDS 429335 - 430198 518 ## CDR20291_1789 putative conjugative transposon membrane protein Predicted protein(s) >gi|229269866|gb|GG666045.1| GENE 1 59 - 982 882 307 aa, chain + ## HITS:1 COG:SMb21087 KEGG:ns NR:ns ## COG: SMb21087 COG0507 # Protein_GI_number: 16264414 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Sinorhizobium meliloti # 3 172 88 251 1539 116 38.0 6e-26 MAEKNSNAQLARQFIIGLPKELSLSENKNLVERFIKENLTSQGMIVDYAIHDESQDKNGN IHCHIMTIMRPINEKGEFLAKSKKEYILDEKGEKVLNKNGKPKTRKVELTTWNDKGNVEK WRENFSYLCNEYLAKNKIEKRVDHRSFKRQNSDYLPTIHLGSAASAMERKGIETDKGNYN REIRKYNDLVKTIKEEIKTLKGWIGNLLDNLSTAYEKFKDIERDKVIDNPKLFNLTNYLL TYSEIQKEKSKYLKGYAKTNKEKYDFKKLTSAYSYLRKNNIETIGQLQTKIETLKSNSYK LNKKAKI >gi|229269866|gb|GG666045.1| GENE 2 2597 - 3670 433 357 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 [Haemophilus parasuis 29755] # 18 357 9 331 339 171 32 4e-41 MDKKDLDIIGDGEYKKLLLDLKEKVRRSQLKAAVKVNYELLDLYWILGKEIVEKQKQYSW GDSFLKLLSSDLRKEFPDMGGFSAVNLKHIRYWYNFYNDYLIGLQAVTQLSDIERRIKSI PWGHNQRIMYKCKDVKEALFYIDKTIENGWSRTVLEHQIDGDLYKRVGNAVTNFDNRLPA VQSELAKQTIKDPYNFDFLTIRDKYDERELEEALVNQITSFLLELGTGFSYMGRQVHIKV GESDFYMDLLFYHVKLHSYVVVELKTEKFKPEFAGQLNFYVTAVNKNMKSNSDNQTIGIL ICRDKDNVVAEYSLENISQPIGISKYEISKLLEQEYKSSLPSIEEIEESIKELDSEK >gi|229269866|gb|GG666045.1| GENE 3 3742 - 4455 637 237 aa, chain + ## HITS:1 COG:no KEGG:FMG_0972 NR:ns ## KEGG: FMG_0972 # Name: not_defined # Def: putative replisome organizer # Organism: F.magna # Pathway: not_defined # 1 237 1 237 237 294 69.0 2e-78 MADKRMFSLKIVDSDLFLDMPLSSQCLYFHLSMRADDDGFVDNPKKIIKIIGANEDDLKI LITKGFVIVFERGIIVITHWKINNYIRNDRRKETMYITEKQSLTQTENGAYIKLENLGIP NDNQVSTICPHSIGKDRLDKVSIDKGRGEKENQAAPVSFYGEFKNVRLSKEEYKNLKEKL NSHAEIMINKLSRYMESRGKTYQNHYVTILNWYEEDKDKLTQKGLNKKMNYDVGESL >gi|229269866|gb|GG666045.1| GENE 4 4610 - 4795 282 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484724|ref|ZP_03915040.1| ## NR: gi|227484724|ref|ZP_03915040.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 68 100.0 1e-10 MHENRNEQNTGTKTIKKIGKVTYEVIVHFNKNATETMQDKLKRIMLREMEREKDQKDDKN D >gi|229269866|gb|GG666045.1| GENE 5 5641 - 5916 355 91 aa, chain + ## HITS:1 COG:no KEGG:Apre_1806 NR:ns ## KEGG: Apre_1806 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 90 1 90 91 142 95.0 3e-33 MCENRKSSLIILNINGEQFILESDTELTRDKKNYIEAICETMYDESNEWYEDIYDMSPYD IAELFEKTVKEEVGITVTFKAIDLEVSILED >gi|229269866|gb|GG666045.1| GENE 6 6105 - 6416 572 103 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_0143 NR:ns ## KEGG: HMPREF9243_0143 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 103 1 103 103 140 95.0 2e-32 MDREMININANLVKEAEFSEFEKDGENVQVANFALVKNYGKGKEYTNCSVYGEKVEIVKE FEKGDLIHVFGYFKENKKGDKVYKNFIVKSLNKIENKKENEEE >gi|229269866|gb|GG666045.1| GENE 7 6418 - 6633 412 71 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0876 NR:ns ## KEGG: SPAP_0876 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 71 1 71 71 102 100.0 6e-21 MEFFTAGVGVLKTLVTAIGAGLGAWGVINLMEGYGNDNPGAKSQGIKQLMAGGGIVLIGI KLIPLLANALN >gi|229269866|gb|GG666045.1| GENE 8 6644 - 7507 828 287 aa, chain + ## HITS:1 COG:no KEGG:FMG_0963 NR:ns ## KEGG: FMG_0963 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 287 1 287 287 502 99.0 1e-141 MFGIFDKLTEFFKDMLLGGIKANLESMFLDINDKVGVIATDVGKTPMGWNGEVYNFIKNI NDNVIVPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMFIAVYLASHAFEFS MAVFDVAQNLVNKAAGVITTSATVSGDQIVAMVDTLKEKEIGELLMILVETSLVRIAIQC ISLTITLIVYGRMFEIYVYSSVSSIPFATMGNKEWGQIGTNYIKGLFALGLQGLFLMICL GIYTVLIRTVQVTDIHASLFSILGYALLLGLMMFKSGTVAKSIMNTH >gi|229269866|gb|GG666045.1| GENE 9 7517 - 7807 382 96 aa, chain + ## HITS:1 COG:no KEGG:FMG_0962 NR:ns ## KEGG: FMG_0962 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 96 1 96 96 107 98.0 1e-22 MLKKKNCALLGLGILLGGTYEILKEKKRNEKIRNLKRRINRLGRCHNEFVMYQGEYNDRN EEKQEELEERISYLEEETTSNYDHILELSKEEVEGD >gi|229269866|gb|GG666045.1| GENE 10 7809 - 8219 351 136 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1689 NR:ns ## KEGG: MGAS10750_Spy1689 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 136 1 136 136 214 99.0 1e-54 MAYVPIPKDLDKIKTKVAFNLTKRQLIGFSVAGLIGIPTYLFMKKYLPNDVSIIVMLIVT LPIFFITLYEKDTLTFEKYFKFFYLHKFYQPTKRIRKEAYLEAKKKANQRLKSKGKTIKK RPKGSKKAKNKERSNK >gi|229269866|gb|GG666045.1| GENE 11 8110 - 10533 2005 807 aa, chain + ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 283 777 74 594 617 91 21.0 8e-18 MKQRKKQISDLNLREKQLKKDRKEVRRLKTKKDPTNSLLSVLLKKEKKRFTVEDTIPYIR MLPEGICQLDEKNYSRTISFQDINYQLALEEDRDLIFNQFANFLNSFDPSVHIELSYVNQ LGRNKDLQDAIKIADKGDFYDDVRKEFREMLKLQLAKGNNGLKKMKYITFTTEADNLEQA RAKLNRLEVDILSNFKSMGVRAESLDGEERLRLVHDMLNPDKNFYFSYKDLKKKESTKSH ITPNIFNFAPANNFKFGKFIGAVSHFQILASELSDRMLSEFLDIDDNIYVAFHIDVVEQA EAIKLIKRKNTDLDRMKIEEQKKAVRAGYDMDIIPSDINTFGADVKSMLSDLQNRDERLF VVTIVIMNFARTNQKLENTIAQISSIANRHNCQVKRLSHQQEQGLVSVLPLGVNQVEIKR FLTSSSTAVFMPFTTEELFIDSANSLYYGLNALSQNLIMADRKKLKNPNGLILGTPGSGK SFSAKREMANAILVTDDDVIICDPEGEYSNLVKQFNGEVIKVSAKSKDYLNPLDINMNYG DGDAPLKDKANFIMSMLELVVGGSGLTAAEKSVIDRCLPKIYQKYFEDPKPENMPILGDL YDMLLSQEEGVGRKLATEMEIYVKGSLNVFNNRSNVDLNRQLLCFDIKELGTQLKKIGML VIQDQVWNKVSLNRGSKSTRYYIDEFHLLLKDPQTASYSVEIWKRFRKWGGIPTGITQNV KDLLTSQEIENIFDNTDFVLMLNQASGDRDILAKKLKISPYQLNYITNSNAGEGLLFFGN TIVPFIDKFPKDTMLYKLMTTKPEEAK >gi|229269866|gb|GG666045.1| GENE 12 10541 - 13120 2232 859 aa, chain + ## HITS:1 COG:lin0591_4 KEGG:ns NR:ns ## COG: lin0591_4 COG0791 # Protein_GI_number: 16799666 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Listeria innocua # 736 857 108 223 224 104 45.0 6e-22 MDKKLKKDFQKKIIRNRDAPEKNIDSKLVHSDDYTNKIIKTKDRFGDKISQKESKLIHEN VLSKDQKQDKLKDFQKSKNKERIRKEVLDNKNKAEEINQANFEIKTDESFKLDEELDVDY KKVNFDSKNSRNINSNKLTTDDISANTEVISNKKTSSKRQVLKNYEDKLIHSKDKFQDKI NERESKRIHTSEDKPIEAKKSKRIYRKDKLVKDEVSKNESNANIDKKQKHKLYQEKKFRD KEKFSKEIDKENKLSEVDTDKTFDNSELKDNNLEFIKDEKETSLKPSEQKKVNKKKTYYK RKNYESDKFTRKKIDDLKNESKKVTTKDSKKAQDVKDFISDKKIGELEKSKSKLKDNILK NKTKGGLSSGGLLSGAKSSELVRDYLSSGSDNTGVESGEKVANVSSKLQHGIRKYKLDKK KKSLKKLSKLDKKIRNRKSKLEFKSGLEDLKKSDAYIKKNRFKKFYQRKQMKSMIAKKHE TRLVDRVKKAILSLGKASKELIVRKSKMVLFLVIGLGLMLSIMIGGGSVGMSGLSNSVNS VMTTTYLSQDTVLSEVNQEFSSMEYDLQSQIESIKTSHPGYDEYIINKEGEIGHNTHELL SYITSRCGEVKSASEVKGILKELFYKMYKLDFKEEIEIRTRTVERTRYDSRGNPYTSYEK EEYEYKKLIVTLKKKEMDEVVREIFKDYPDNVVHYEALLEAKGNMGDVFGSGNGDLGEIV DNPNFGNPGLAFDSETAKALFNEAEKHIGKRYVFGASGPSNFDCSGFVCWSFTKSGVKRM PRTTAWRIYKDYCNPVSPSEAQPGDIIFFHSTYNSGTPISHVGIYAGNGMMIHAGDPIQY TSINSKYWKSHFYGFGRPR >gi|229269866|gb|GG666045.1| GENE 13 13135 - 13374 161 79 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0882 NR:ns ## KEGG: SPAP_0882 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 79 1 79 79 62 100.0 5e-09 MNRKLISIRNKKKKIEEKLKDLNAKYKEICDEEIQVENEEIIVTLRRNNISLEELMEKIN DRKREEKLKEKENIHNEEI >gi|229269866|gb|GG666045.1| GENE 14 13361 - 13954 706 197 aa, chain + ## HITS:1 COG:no KEGG:Apre_1818 NR:ns ## KEGG: Apre_1818 # Name: not_defined # Def: copper amine oxidase domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 194 1 194 527 196 92.0 3e-49 MKKFNTNRLRAFFMALLLVLTSTSTTNVLAKADDTHGSKKVIESSISNINDLEDQIKDLN EKKQEDQSKIDELKEKLESCKDNGEKLKQEKAKLEEEIRDKDKKIAQLDKEIENLKNSNN DELIAEITQLKDELKRLQDENAKLKEDYSSTIWELEAEKEKAVKNENKIKEMQEKLKSLE GELAKKTKEIEDKDLAS >gi|229269866|gb|GG666045.1| GENE 15 14595 - 14990 540 131 aa, chain + ## HITS:1 COG:no KEGG:FMG_0957 NR:ns ## KEGG: FMG_0957 # Name: not_defined # Def: putative bacteriocin # Organism: F.magna # Pathway: not_defined # 1 107 156 262 288 147 97.0 2e-34 MHLIVDHSSNQDNVRLLTEVGEQDLLNMIESEDKNTIKVEEPKKEEVKKEEPKTVPVKEE TKSGIGSFLIIALVIGGVIGAGYYFKVVKAKEDKMLEDFEEDDEDYISESEDESDNEESH EESLDEDDELL >gi|229269866|gb|GG666045.1| GENE 16 15064 - 15675 677 203 aa, chain + ## HITS:1 COG:no KEGG:Apre_1820 NR:ns ## KEGG: Apre_1820 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 203 1 203 203 347 91.0 2e-94 MSSYTEKISDKINDFDSHKVFFANDFLDIASYETARKALNRMVNERKIKRVIDGFYYNPR YSELIGEYEAVSIHELALAIARKYNWNIAPYSSTALNLLGLSTQVPTHYKYISSGRYKEY KIGDTVLEFKKVNPGEIANMSLKTATVIQAIKSLGKENITNEVIQKIRESLTEKERTDLM NESKSVPSWIYEVIREICEGKNE >gi|229269866|gb|GG666045.1| GENE 17 15668 - 16651 835 327 aa, chain + ## HITS:1 COG:no KEGG:Apre_1821 NR:ns ## KEGG: Apre_1821 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 327 1 327 327 549 91.0 1e-155 MNKFYIENKEDLRVLIVNTARKKNISEAVIEKDYWVTFILDYLFNENKWKEYFTFKGGTS LSKCFRLIERFSEDIDLILDWRVLGYEEKEPWIERSNTKQDKFNKKVNEKTEIFLKDEFL KVLEEDLKDFDFEFSIDTIDPQTILCKYPKIFESNYLTQNIRLEIGSLAAWTPAIDVEIL PIISETYANVFKEKTNIRTVSAERTFWEKATILHHEANRPESSPMPHRYARHFYDLYKIA NSDFKNKALEDKELLKKVTEFKMKFYPRKWAKYEDALNGRLRLVPREFRFSEIEKDYKAM EEMIYGEYPNFEEIIKVLKELEKEINK >gi|229269866|gb|GG666045.1| GENE 18 16743 - 18464 1497 573 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 564 5 591 709 407 43.0 1e-113 MKLVIAEKPSVAVTIAKVIGARTRKNGYYEGGEYIVSWCVGHLIQMASPDKIDEKWKKWT IDTLPIIPEEYIYEVSKSTKKQYGVLKKLLNDKNIDTVINACDAGREGELIFRLVYNQAK CKKKIQRLWISSMENKAIEDGFRNLKDGENFEDLYRSASARAIADWLVGMNLSRLYSCIY KETYSVGRVQTPTLYLIAKRDSEINLFKKQKYYTVDLSYEGLKLVSDRIDKIEVAEQLLN LLEDEIVITEVEDKEISTKPDKPYDLTTLQREANKYFGYSANDTLNLAQALYEKKLITYP RTDSRYLTDDMVNTMKELLEGLEEDFKLNKSNFKSVFNSSKVTDHYAIIPTISGIEKAKD LSDKESKIYNLIKNKLLASCSDNLKESSRKIRYEYDKFNFNASGKTIIDEGYAKYLKPYG KERQENELPDIKTGDKIKLTSKNISEKFTKAPSHYNEDTLLKAMENAGVESLDKDIEVER KGLGTPATRAGIIENLIHKDLIRRDKKNLLVTEKGNRLVSIVEDKFKSAETTSEWEMKLA KISSGEVDKEDFLREIENSIRELVDRYKNNLNE >gi|229269866|gb|GG666045.1| GENE 19 18457 - 19422 764 321 aa, chain + ## HITS:1 COG:CAC1222 KEGG:ns NR:ns ## COG: CAC1222 COG0270 # Protein_GI_number: 15894505 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Clostridium acetobutylicum # 4 311 7 303 314 297 50.0 1e-80 MNKVKILELFGGIGAIRKAFINLKIPYEVVDYVEIDKACVKSYNALYGEDYKPKSVVGYK APNEQIDLVMHGSPCQDFSRIGKKQGGVKNSGTRSSLLFETIRIIKEMKEKPKWIIWENV KGVLDRNMRDSFFIYLKELEDLGYESKYEILNAMDFGIPQKRERIFVVSCLGANNFSFNK LERKETRPLSEFLEKDVSELYTMTQPYMLKFLNKGIDNSFRGRLKVIKDYSYTISTKQMR VPNSGIIDIGNGKYRYLTERECLRLMGFDDSDINKLEEVHPRRKNCTSSKLYKQAGNSIV VDILMAITKEIHRMEVGNASK >gi|229269866|gb|GG666045.1| GENE 20 19409 - 27052 6879 2547 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1046 2339 2 1305 1315 617 30.0 1e-176 MQVNDFKNIQEAIKYEVLQDEKEYLKLLKVIGNNQKYDFSSQLSIYNKVPEARACATFDM WKKYFGRVVMRGQKGIPILVGNDINQRISYIFDISQTTSMDRNINEVSLWQFDHENHNDA LKEIINASSFEASDSLNENIFSLSRIYGDDYINLALADLRIDIEDRLSFEKFMRDSISYA VANRFNTAYPMDMENLKNNFSRINTFSLEQIGLVISRISEDIIDSTIEKSKEMDRTRLLT ERATADYNRDIENINEDRGGQDDLYRRDDRSRSRDGRVFTDGSDRGNSNEDRRENFGQDG GGSGIYGEISESDIRSSKTVLPGRERGHGELEEASGNVRGENTFEPSEGNSESGSGVHQE RESQDDESTRIDREDEKRESRGIPRTDEQLDGNSEENGNQGIRGSLENEISQEKEADEAS FFDGKNTENRKDYWIVEFNENHELVPDYSGQIVTKDLINVLRRKDIDVKEHNQTHGENEF GEMTDDYIGYFKFYFDHYVDGEVVEHYRIDLGDGEEVNEREFSYLEEQVELSEEKSLQEE VKENIEPKFKIGDQVRYKDKDFTITDFDELSGGLKTVTIRDNMEYMGGMIRGSEVIPYRN DSYLEEIFENLSQTSEKLAVKVGKEFILEDENTFDGINLIETGAKVEVNGEEYPLYKGET FEESRKIDDLLDSGNYEIYKLSEHENQIETEVEQESFIDNHNPEIDQMMDKYNVPRQAAE NLLRGKEDLKNLGYEPNKEKLSFARNYDLKNHIYSEYLTPSEKLDKNIKAIKMLKRLENE NRSPREYEQAYLADYLGWGGLADVFDEEKGGQWLEARNILKENLTNEEYLNAKESTLTSF YTPREVMDGIYRTLTDMGFKTGNILEPSAGVGNLIGNMPSEMKASKVYGVEKDSLSGRIA RELYPEANIQIKGFEETNFSNNFFDLIIGNVPFGDFKVNDREYNRNNFLIHDYFFAKSID KVRNGGIIAFITSSGTMDKKDESVRKYINARCKFLGAMRLPNTTFKGLAGTEVTSDIIFL KKRDSVIERDDDWIHLATDKKGLTYNKYFVDNPQMVLGDMKEVSGRFGNTITCDEKEDEN LKDLMDLASKEISSNSKYEEVELLEDEELILPATDDVKNFSYTIIDEEVYLRENSVLIKQ NISDKNKEKIKDYLDVMNALKDVIEKQKDDFSDAEIKESQAKLNEVYDNFSKKHGFINSL SNTRALKEDSNFPLVSSIEILDDEDNFKAKSDIFSKRTITKAKVVDHVDTSLEALVLSIS QKGYVDFEYMESITSKDRNTLIGELEGEIFLDIKDTDLINNRMPFENFDNDDPFHFSYVS ADEYLSGNIREKIGYLNSYIGEIENVIDLAPSEKKDTLLNELSKLKYQREKLQEVMPEEL TASDINVRLGATWIPQKDIEDFTFNLLKTPGYDRWNINVRFSPHTSEWNIEGKSVDSTND LANMTYGTSRVNAYKLIENALNLKDTKVFDQVINDDGSKTSVLNKKETMLASQKQELIKE EFKNWIFEDPDRRYRLEKIYNEKFNSIRNREFDGSNLTFDGMNTEIRLREHQKNAIARTL YGGNTLLAHVVGAGKTFEMVASAMESKKLGLASKSLFVVPNHLTTQIGREFMQLYPSANI MVADKKDFQPKNRKRFIGRIATGEYDAVIIGHSQFEKIPMSKEYQVRHIQDQIDDIVSFI DENKRNRGENFTVKQLEKTKKKLLVRLEKLNDDFKKDDVITFEELGVDKLFIDEAHNYKN LFLHTKMRNVAGIGQSEAFKSSDMYMKCRYMDEMTNGKGVVFATGTPISNSMTELYTMQR YLQYDDLKARGLEHFDAWASTFGETENTFELSPEGTGYRQKTRFSKFYNLPELMSMFKEV ADIKTSDMLNLPVPEANFEVIKTKPTEEQKEILEAISERADAVRNNQVEPTEDNMLKITN DGKKLALDQRLINPLLPDDPNSKVNVCVKNIFSIWDKTKENSSTQLVFSDMSTPKGDGEF NIYDDIRNKLVNMGIPKEEIAFIHEADTDKQKDELFSKVRRGEVRVLLGSTQKMGAGTNV QNKLIALHDLDVPWRPSDLEQRSGRIVRQGNENDKVNIFRYVTENTFDAYLWQTIENKQK FISQIMTSKTPVRVAEDVDEASLSYSEIKALATGNPLIKEKMDLDNEVTKLKMLEANYKS NKYKLEDKVNKIYPQSILKTEMEIQAVKEDIASIEKLGEGDSKFTSISLGADKILDKKEA GEKLLEEIKKVKINDSKVIGKYRNLDLQVSYNFMTNTHTFKLLGKAEYFGEFSNSTDGNI TRLDNAIEKMPSRLERLNQNLENYKESLENAKVELTKPFEKADELRDKTLRLAEINKLLD MGEVEELENQSPLLEDLKRAIVDYSNYEFSESNSYEDFDKLYPDLNHIGLAYTETPDGKH SIQYEVNLEEKTWTQYVDNVAIRTESFVGEDISNSQALKDMTEAIKMSSFDDLVSVDEED LKQALGLEIDDDGNFYDPLAKDLDNDGIPDRYDNDFKDSDYFESTYDVEDNLHAKEEKPS ILGQISKFKSEEEKDKNQEKNEKGQER >gi|229269866|gb|GG666045.1| GENE 21 27096 - 27752 776 218 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1699 NR:ns ## KEGG: MGAS10750_Spy1699 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 218 1 218 218 293 92.0 4e-78 MEYKDIRENLEEMMNDNYKDFIKALVSIEKGVTDEKALEEVYVLFMIKDTTGLLNDDFDY MIDDMKEQGKIVENINELEEKDDLINLVGNIAGKVENLERENANGEKFKVSNFSIVSKDD DGNKVYTNCSAYGDKTKDLDNLKQGDFVKIFGQVKTSIDNKGKEHKNVRILSSKLLKAKE QVKSQDKDKKSILGQIKSFKTDDKVKSNKKDHSKGAER >gi|229269866|gb|GG666045.1| GENE 22 28109 - 28273 129 54 aa, chain + ## HITS:1 COG:no KEGG:Ethha_1845 NR:ns ## KEGG: Ethha_1845 # Name: not_defined # Def: hypothetical protein # Organism: E.harbinense # Pathway: not_defined # 1 54 1 54 54 70 64.0 2e-11 MTTPLFLLRAVELGLSVSDLSLLTIGLVNDMFTEKNNDEYKYKEVATQEDFDKF >gi|229269866|gb|GG666045.1| GENE 23 28370 - 28840 437 156 aa, chain + ## HITS:1 COG:no KEGG:Apre_1828 NR:ns ## KEGG: Apre_1828 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 156 1 156 156 261 93.0 5e-69 MRKRFLIMAIFLVFSIVLTSCSPNTTTEQTSSKKEEKIEIFDSNNKKIVETEEQEVLDYF GNLTGMSVANINDKNFDNYFKEIPDDAIESYHFILTSKREDKKATKIDFYIYENYPYITM EGMPMIPSSLTWELSKEDLNYLKDRVQEWKDVDDNR >gi|229269866|gb|GG666045.1| GENE 24 28863 - 29384 210 173 aa, chain + ## HITS:1 COG:no KEGG:Apre_1829 NR:ns ## KEGG: Apre_1829 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 173 1 173 173 237 97.0 2e-61 MKSFIFKIAIILSKVVRYISYLGAGFTLLGSVLTLIFKDDVIQVVESNQFNLQEVSLPFI IYSCLSALMIFIVAGFSLDKFEKILVNLEKKDYFSDLNSKYSRDILIALIILTICQIISM LVFNYLKVDNISGVFNLTIKDYLTNIILMVIAFSSMMIFNSGKSLKEDSESII >gi|229269866|gb|GG666045.1| GENE 25 29387 - 29611 200 74 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163756262|ref|ZP_02163377.1| 50S ribosomal protein L20 [Kordia algicida OT-1] # 5 67 3 65 67 81 57 4e-14 MKDQIIINLDQVLKKKNMTSKELAARIGITEANLSILKTGKAKGIRFNTLASICKELDCQ PGDLLEYDNEEYQQ >gi|229269866|gb|GG666045.1| GENE 26 29692 - 29964 276 90 aa, chain + ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 1 88 1 85 87 59 38.0 2e-09 MATTNLNIRTDKEIKEAAEKIYSSLGLNMTTAINMFLRASIRESGIPFDLKLNVPSDETI KAIEEGRMIAKDTNVKSYDNMDDLRKALEV >gi|229269866|gb|GG666045.1| GENE 27 30888 - 31571 565 227 aa, chain + ## HITS:1 COG:BH1808 KEGG:ns NR:ns ## COG: BH1808 COG0745 # Protein_GI_number: 15614371 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 4 224 5 227 231 176 43.0 4e-44 MNYSVLVVEDDESILDLIEIYLENENYIIKKATCSEEAIRYIKEEEFDLAILDIMLPDKD GYYLCKKIRESFNYPIIMLTSKDDESSKIKGLTFGADDYVTKPFLPGELVARVKAQLRRY NNYNLKTKEGTGNILTYQNVDLNIKSREVLVDGQEIDLTPIEFIILKSLLEKKSEVLGSE DLFYKIYPDEYYIKNNTVSVHIRHIREKLGEKNNIITTVWGVGYKIG >gi|229269866|gb|GG666045.1| GENE 28 31648 - 32610 603 320 aa, chain + ## HITS:1 COG:CAC0565 KEGG:ns NR:ns ## COG: CAC0565 COG0642 # Protein_GI_number: 15893855 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 72 317 251 497 499 134 41.0 2e-31 MLAIDSNIFRFNNEIHEFFVNRLDLIFFVILLLGILIIIIKEFSKLEKDYIDLCKKIDDL DENVVSFPTPYKTLEDSINRLKFKQKEIEYTLKKRENEDNDLITYLAHDLRTPLTSIIGY LSMLDEMKDLPNKQREKYIRQLLETALGLEDLINQFFEIARLNNGEFSIHKEKIDLEYFL IQLRDELYPMMKENNHKINISSEGSIFVNVDPNKMKRALENILKNAILYSYANTEIKVKI YQTYKCVILKIINKADTLEEAQIRNMFNKFTRLNLARNSKKVGSGLGLPIAKEIIELHEG KIEVESSNNEVIVIVRLKNK >gi|229269866|gb|GG666045.1| GENE 29 33004 - 33318 396 104 aa, chain + ## HITS:1 COG:no KEGG:SPH_1425 NR:ns ## KEGG: SPH_1425 # Name: not_defined # Def: conjugative transposon protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 104 1 104 104 203 100.0 1e-51 MELKFVIPNMEKTFGNLEFAGEDKVVQRRINGRLTVLSRSYNLYSDVQRADDIVVVLPAE AGEKHFGFEERVKLVNPRITAEGYKIGTRGFTNYLLHADDMIKE >gi|229269866|gb|GG666045.1| GENE 30 33337 - 33720 388 127 aa, chain + ## HITS:1 COG:no KEGG:SPSINT_2122 NR:ns ## KEGG: SPSINT_2122 # Name: not_defined # Def: hypothetical protein # Organism: S.pseudintermedius # Pathway: not_defined # 1 127 2 128 128 227 100.0 1e-58 MRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSI PASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAK KEPTQDK >gi|229269866|gb|GG666045.1| GENE 31 34043 - 35134 450 363 aa, chain + ## HITS:1 COG:BS_ydcQ KEGG:ns NR:ns ## COG: BS_ydcQ COG1674 # Protein_GI_number: 16077553 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Bacillus subtilis # 1 357 106 461 480 396 55.0 1e-110 MILENKWYESEQVKTEGFFKDSAGRTKEKITYFPKMYYRLKNGLIQIRVEITLGKYQDQL LHLEKKLESGLYCELTDKELKDSYVEYTLLYDTIASRISIDEVEAKDGKLRLMKNVWWEY DKLPHMLIAGGTGGGKTYFILTLIEALLHTDSKLYILDPKNADLADLGSVMANVYYRKED LLSCIETFYEEMMKRSEEMKQMKNYKTGKNYAYLGLPAHFLIFDEYVAFMEMLGTKENTA VMNKLKQIVMLGRQAGFFLILACQRPDAKYLGDGIRDQFNFRVALGRMSEMGYGMMFGSD VQKDFFLKRIKGRGYVDVGTSVISEFYTPLVPKGYDFLEEIKKLSNSRQSTQATCEAEVA GVD >gi|229269866|gb|GG666045.1| GENE 32 35975 - 36517 203 180 aa, chain + ## HITS:1 COG:BS_ydcR KEGG:ns NR:ns ## COG: BS_ydcR COG2946 # Protein_GI_number: 16077554 # Func_class: L Replication, recombination and repair # Function: Putative phage replication protein RstA # Organism: Bacillus subtilis # 2 165 178 340 352 132 43.0 3e-31 MGNTLYIGSLQSEVYFCIYEKDYEQYKKNDIPIEDAEVKNRFEIRLKNERAYYAVRDLLV YDNPEHTAFKIINRYIRFVDKDDSKPRSDWKLNEEWAWFIGNNRERLKLTTKPEPYSFQR TLNWLSHQVAPTLKVAIKLDEINQTQVVKDILDHAKLTDRHKQILKQQSVKEQDVITTKK >gi|229269866|gb|GG666045.1| GENE 33 36560 - 36781 191 73 aa, chain + ## HITS:1 COG:no KEGG:SPG_1238 NR:ns ## KEGG: SPG_1238 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 73 1 73 73 103 100.0 2e-21 MNFGQNLYNWFLSNAQSLVLLAIVVIGLYLGFKREFSKLIGFLIIAIIAVGLVFNAAGVK DILLELFNRIIGA >gi|229269866|gb|GG666045.1| GENE 34 36898 - 37395 532 165 aa, chain + ## HITS:1 COG:no KEGG:SPG_1237 NR:ns ## KEGG: SPG_1237 # Name: not_defined # Def: Tn5251 hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 165 1 165 165 295 100.0 5e-79 MDDMQVYIANLGKYNEGELVGAWFTFPIDFEEVKEKIGLNDEYEEYAIHDYELPFTVDEY TSIGELNRLWEMVSELPEELQSELSALLTHFSSIEELSEHQEDIIIHSDCDDMYDVARYY IEETGALGEVPASLQNYIDYQAYGRDLDLSGTFISTNHGIFEIVY >gi|229269866|gb|GG666045.1| GENE 35 37583 - 37876 226 97 aa, chain + ## HITS:1 COG:no KEGG:SSU98_0933 NR:ns ## KEGG: SSU98_0933 # Name: not_defined # Def: hypothetical protein # Organism: S.suis_98HAH33 # Pathway: not_defined # 1 97 49 145 145 180 98.0 2e-44 MTWFVVSLFSVMILGNLPPLSMIEGAFLKYFGIPVAFTWFMSTKTFDGKKPYGFLKSVIA YALRPKLTYAGKKVTLGRNQPQEAITAVRSEFYGISN >gi|229269866|gb|GG666045.1| GENE 36 37860 - 40307 868 815 aa, chain + ## HITS:1 COG:no KEGG:SPCG_0166 NR:ns ## KEGG: SPCG_0166 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 815 18 832 832 1585 100.0 0 MAYPIKYIENNLVWNKDGECYAYYELVPYNYSFLSPEQKIQVHDSFRQLIAQNRDGKIHA LQISTESSIRSAQERSKNEVTGKLKAVAYDKIDQQTDALISMIGENQVNYRFFIGFKLLL NDQEFSMKSLTVEAKNALSDFVYDVNHKLMGDFVSMSNDEILRFQKMEKLLENKISRRFK IRRLDKDDFGYLIEHLYGQTGTAYEEYEYHLSKKKLDNETLIKYYDLIKPTRCLVEEKQR YLKIQQEDETVYVAYFTINSIVGELDFPSSEIFYYQQQQFTFPIDTSMNVEIVANRKALS TVRNKKKELKDLDNHAWQSDNETSSNVAEALESVNELETNLDQSKESMYKLSYVVRVSAN DLDELKRRCNEVKDFYDDLSVKLVRPFGDMLGLHEEFLPASKRYMNDYIQYVTSDFLAGL GFGATQMLGENEGIYVGYSLDTGRNVYLKPALASQGVKGSVTNALASAFVGSLGGGKSFA NNLIVYYAVLYGAQAVIVDPKAERGRWKETLPEISHEINIVTLTSDEKNKGLLDPYVIMK NPKDSESLAIDILTFLTGISSRDGERFPILRKAIRAVTNSEVRGLMKVIEELRVENTPLS TSIADHIESFTDYDFAHLLFSNGYVEQSISLEKQLNIIQVADLVLPDKETSFEEYTTMEL LSVAMLIVISTFALDFIHTDRSIFKIVDLDEAWSFLQVAQGKTLSMKLVRAGRAMNAGVY FVTQNTDDLLDEKLKNNLGLKFAFRSTDLNEIKKTLAFFGVDPEDENNQKRLRDLENGQC LISDLYGRVGVIQFHPVFEELLHAFDTRPPVRKEV >gi|229269866|gb|GG666045.1| GENE 37 40376 - 42487 671 703 aa, chain + ## HITS:1 COG:no KEGG:SPSINT_2115 NR:ns ## KEGG: SPSINT_2115 # Name: not_defined # Def: hypothetical membrane protein # Organism: S.pseudintermedius # Pathway: not_defined # 1 703 23 725 725 1293 100.0 0 MTVAFTLVIAIFLLAMLGTVVQAAGLVDDTVNVANEYSRYPLENYQLDFYVDNSWGWLPW NWSDGIGKQVMYGLYAITNFIWTISLYVSNATGYLVQEAYSLDFISATADSIGKNMQTLA GVSANGFSTEGFYVGFLLLLILVLGVYVAYTGLIKRETTKAIHAIMNFVLVFILSASFIA YAPDYIKKINDFSSDISNASLSLGTKIVMPHSDSQGKDSVDLIRDSLFSIQVQQPWLLLQ YNSSDIESIGIDRVESLLSTSPDSNNGEDREKIVAEEIEDRSNTNLTITKTINRLGTVFF LFVFNIGISIFVFLLTGIMIFSQVLFIIYAMFLPVSFILSMIPSFDGMSKRAITKLFNTI LTRAGITLIITTAFSISTMLYTLSAGYPFFLIAFLQIVTFAGIYFKLGDLMSMFSLQSND SQSVGSRVMRKPRMLMHAHMHRLQRKLGRSMTTLGAGSAIVTGKKGQSGSGSSARTQADH SRPDGKEKSTLGKRIGQTIGTVADTKDRMVDTASGLKEQVKDLPTNARYAVYQGKSKVKE NVRDLTSSISQTKADRASGRKEQQEQRRKTIAKRRSEMEQVKQKKQPASSVHERPTTRQE QYHDEQTSKQSNIQTSYKESQQAKQERPAVKSDFSSPKVERQGNTVQEKTVQKPATSTTT ADRTSQRPITKERPSTVQRVPLQNTRSRPPIKTATIKKVGKKP >gi|229269866|gb|GG666045.1| GENE 38 42484 - 43485 181 333 aa, chain + ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 210 332 2 124 124 144 59.0 2e-34 MKLKTLVIGGSGLFLMVFSLLLFVAILFSDEQDSGISNIHYGGVNVSAEVLAHKPMVEKY AKEYGVEEYVNILLAIIQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGVKYFSELLA SSERLSVDLESVIQSYNYGGGFLGYVANRGNKYTFELAQSFSKEYSGGEKVSYPNPIAIP INGGWRYNYGNMFYVQLVTQYLVTTEFDDDTVQAIMDEALKYEGWRYVYGGASPTTSFDC SGLTQWTYGKAGINLPRTAQQQYDVTQHIPLSEAQAGDLVFFHSTYNAGSYITHVGIYLG NNRMFHAGDPIGYADLTSPYWQQHLVGAGRIKQ >gi|229269866|gb|GG666045.1| GENE 39 43500 - 44417 802 305 aa, chain + ## HITS:1 COG:no KEGG:SPCG_0169 NR:ns ## KEGG: SPCG_0169 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 305 7 311 311 560 100.0 1e-158 MMKFRKNQNKEKQIPKEKKPRVYYKVNPHKKVVIALWVLLGLSFSFAIFKHFTAIDTHTI HETTIIEKEYVDTHHVENFVENFAKVYYSWEQSDKSIDNRMESLKGYLTDELQALNVDTV RKDIPVSSSVRGFQIWTVEPTGDNEFNVTYSVDQLITEGENTKTVHSAYIVSVYVDGSGN MVLVKNPTITNIPKKSSYKPKAIESEGTVDSITTNEINEFLTTFFKLYPTATASELSYYV NDGILKPIGKEYIFQELVNPIHNRKDNQVTVSLTVEYIDQQTKATQVSQFDLVLEKNGSN WKIIE >gi|229269866|gb|GG666045.1| GENE 40 44915 - 46834 381 639 aa, chain + ## HITS:1 COG:CAC1448 KEGG:ns NR:ns ## COG: CAC1448 COG0480 # Protein_GI_number: 15894727 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 2 638 3 647 652 426 37.0 1e-119 MKIINIGVLAHVDAGKTTLTESLLYNSGAITELGSVDKGTTRTDNTLLERQRGITIQTGI TSFQWENTKVNIIDTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMG IPTIFFINKIDQNGIDLSTVYQDIKEKLSAEIVIKQKVELYPNMCVTNFTESEQWDTVIE GNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDNLIEVITNKFYS STHRGPSELCGNVFKIEYTKKRQRLAYIRLYSGVLHLRDSVRVSEKEKIKVTEMYTSING ELCKIDRAYSGEIVILQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREM LLDALLEISDSDPLLRYYVDSTTHEIILSFLGKVQMEVISALLQEKYHVEIELKEPTVIY MERPLKNAEYTIHIEVPPNPFWASIGLSVAPLPLGSGVQYESSVSLGYLNQSFQNAVMEG IRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKAGTELLEPYL SFKIYAPQEYLSRAYNDAPKYCANIVDTQLKNNEVILSGEIPARCIQEYRSDLTFFTNGR SVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNKIT >gi|229269866|gb|GG666045.1| GENE 41 47180 - 47533 280 117 aa, chain - ## HITS:1 COG:no KEGG:SPH_1408 NR:ns ## KEGG: SPH_1408 # Name: not_defined # Def: transcriptional regulator, putative # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 117 1 117 117 216 100.0 3e-55 MRKKEDKYDFRAFGLAIKEARLKRGLTREQVGALIEIDPRYLTNIENKGQHPSIQVLYDL VSLLHVSVDEFFLPANNLVKSTRRLQIEKYMDSFTDKELSLMESLASGINEARNIED >gi|229269866|gb|GG666045.1| GENE 42 48038 - 48460 297 140 aa, chain + ## HITS:1 COG:no KEGG:SAG0919 NR:ns ## KEGG: SAG0919 # Name: not_defined # Def: Tn916 hypothetical protein # Organism: S.agalactiae # Pathway: not_defined # 1 140 18 157 157 248 97.0 8e-65 MKPSFFQTTIENQFDYICKRAMEDERKNYLLYLSRIAKREVSFSDVGDYLVSQFATTDNY STDFQIFTLNGISVGVENDLLSEALRELPDKKREILLLFYFMDMSDSEIADLLKLNRSTV YRHRTSGLALIKKFMEEFEE >gi|229269866|gb|GG666045.1| GENE 43 48457 - 48687 136 76 aa, chain + ## HITS:1 COG:no KEGG:SPH_1405 NR:ns ## KEGG: SPH_1405 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 76 1 76 76 142 100.0 5e-33 MKTQYPMIPFPLIVKATDGDTEAINQILHHYRGYITKRSLRLMKDEYGNQSMVVDEVLRG RMETRLITKILSFEIK >gi|229269866|gb|GG666045.1| GENE 44 49144 - 49347 229 67 aa, chain + ## HITS:1 COG:no KEGG:SPH_1403 NR:ns ## KEGG: SPH_1403 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 67 1 67 67 109 97.0 3e-23 MKQTDIPIWERYTLTIEEASKYFRIGENKLRRLAEENKNANWLIMNGNRIQVKRKQFEKI IDTLNAI >gi|229269866|gb|GG666045.1| GENE 45 49429 - 50646 918 405 aa, chain + ## HITS:1 COG:SA1835 KEGG:ns NR:ns ## COG: SA1835 COG0582 # Protein_GI_number: 15927603 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Staphylococcus aureus N315 # 181 383 167 367 390 74 27.0 3e-13 MSEKRRDNKGRILKTGESQRKDGRYLYKYTDSFGEPQFVYSWKLVATDRVPAGKRDCISL REKIAELQKDIHDGIDVVGKKMTLCQLYAKQNAQRPKVRKNTETGRKYLMDILKKDKLGA RSIDSIKPSDAKEWAIRMSENGYAYQTINNYKRSLKASFYIAIQDDCVRKNPFDFQLNAV LDDDTVPKTVLTGEQEEKLLAFAKADKTYSKNYDEILILLKTGLRISEFGGLTLPDLDFE NRLVNIDHQLLRDTEIGYYIETPKTKSGERQVPMVEEAYQAFKRVLANRKNDKRVEIDGY SDFLFLNRKNYPKVASDYNGMMKGLVKKYNKYNDDKLPHITPHSLRHTFCTNYANAGMNP KALQYIMGHANIAMTLNYYAHATFDSAMSEMKRLNKEKQQERLVA >gi|229269866|gb|GG666045.1| GENE 46 50989 - 51876 651 295 aa, chain + ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 17 291 17 290 294 183 35.0 3e-46 MELEIKNVSKKFKDKLAVDNASATLCPGVWGLLGANGAGKTTLIKMITGISIPSQGEILY NGERINKLGEEYRNLLGFLPQEFICAPEFTVNSFLQYVAALKGIDKSKTEEMIDKLLEVL NLSDVKYKKVVKLSGGMRRRVGICQAILNDPKILILDEPTAGLDPGERIKLRNFITEISK NKIVLLSTHIVSDIEYISTSNLIMKDGKFVYSGTTDELISKIKNKVYEASISNREYAEKE TQLNVVNVKQQDDGNVLIRYISDKDDVLNNSKLTKAHLEDFYLWVFPEDRSFKVN >gi|229269866|gb|GG666045.1| GENE 47 51878 - 53152 699 424 aa, chain + ## HITS:1 COG:no KEGG:Apre_1836 NR:ns ## KEGG: Apre_1836 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 424 1 424 426 664 90.0 0 MKIYLNEIKRILSIRSNQIIILFSLLLAILLSIAPINFTKITYGEGDKVKNLKGKEAIEY IKKAKEPYSGKITEDLIYNGTKKYREILREYNVTDRSELKPEINTKELMPIEHISKKVNE VFTDSQSNNLPPVLSIDINDTKYFYNKVFDYLNRVIENEYPNKAQNQIIEKSEKALSKIK TPYEYYGYYSTDANDYRGFYNTIIIILMVVVAATIFSSDSENDLDYIFKTTKYGRRKFAI YKILAILTISVLTLLLGNFIQGSILDYAFGTEYKKTSVQMMFSALSLHNWNFGQFNKYML ICNSIILISTILATLIISVLSKRKVESIMKSILLAVFPTIISPIGMISAINYIFPSSGVG LLNSLQNQIADFNFVNVFGNWMSSSSLIMISAVIYIIILPSLVVMMYSKIGGNYGLNNPR SRKI >gi|229269866|gb|GG666045.1| GENE 48 53118 - 53408 361 96 aa, chain + ## HITS:1 COG:no KEGG:Apre_1837 NR:ns ## KEGG: Apre_1837 # Name: not_defined # Def: radical SAM domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 94 265 358 518 163 86.0 2e-39 MDLITLEAEKYNNKENITLNMVIEGPDYEDKYDKIQVYLNECDWLPKNINILTSSIDYGP HESIYTRPQSYEERMILKDYYDPILSWDEKNKIRRI >gi|229269866|gb|GG666045.1| GENE 49 53578 - 54807 544 409 aa, chain + ## HITS:1 COG:no KEGG:Apre_1839 NR:ns ## KEGG: Apre_1839 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 409 1 409 409 667 96.0 0 MNIYLQELKRFLSKKSVRVFLVVGLFFTFLISFITYRSVQYDDISSGDTITYFGKEAIDH FNEDNKASEGYLTEEKITKVVKSYKEILNNENVNSRENLSEDAKKNISKFDPILRVITYP YTITTSGSLLDVNELDTEKDLNFYQSCYDALERDIKQKYDNDKITEFALEKYKEVNKPFY YGGYFSEDILFFVNIFITVLSLICILISSQCIVEDKENYLDSIFRTTRNGRNKYICSKIL ALASIISLYLILNISIYYGTIKYLYTNGLDSSFQMLLFNQLSISNLTIGKVILSVFLLSI LFTIASSMMSIFVAINSKVSMVSSAISSVLFFIPSLLYGKKLFKSIFYFLPSMGLGTAEN SLIEQYQKFEFVKLPGKILWIPKFLVIMALINIALYLLLSIKSYNKIEQ >gi|229269866|gb|GG666045.1| GENE 50 54838 - 55164 156 108 aa, chain + ## HITS:1 COG:no KEGG:Apre_1840 NR:ns ## KEGG: Apre_1840 # Name: not_defined # Def: ABC transporter-like protein # Organism: A.prevotii # Pathway: not_defined # 1 108 1 108 591 134 85.0 1e-30 MGKDKINHLECIKIAFKMIYEVDKNSFAITIILSIVSGVFPFLVLKLGQTIINIIQIHST RFDNIIILILIYLSLQFISVIVDNIKNYYLQRLSNEVTYSSMRKVMGK >gi|229269866|gb|GG666045.1| GENE 51 55269 - 55790 153 173 aa, chain + ## HITS:1 COG:SP0049 KEGG:ns NR:ns ## COG: SP0049 COG4767 # Protein_GI_number: 15899994 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Streptococcus pneumoniae TIGR4 # 19 142 15 141 169 60 37.0 2e-09 MKLKNQYISVGMKVLTVYYIIWLIFIVVFKMTFSINNLLIERQINLLPFYYDNTVNIKVI FDEMVSNILIFLPLGIMIRSILFRKNNLKSILFVFFFSLAIEFLQYALSIGVFDITDIIN NTLGGVLGVGIYNLALKKFKSKFKVDKFIFWIAFISAIFISLVLIVFLKYNGI >gi|229269866|gb|GG666045.1| GENE 52 55937 - 57022 685 361 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0900 NR:ns ## KEGG: SPAP_0900 # Name: not_defined # Def: type IV secretory pathway, VirD2 components (relaxase) # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 361 86 446 446 558 95.0 1e-157 MELCKKILKEDYEFVLATHIDRGHIHNHIIFNNVNYKTGKCYQSNKKTYHKIRYQSDELC KENKLSVIDKYYEAYKRKYKTSGKSWYEYDQNKKGNSWKSKLQFDIDRMINKSNSWKEFL ENMKSLDYEIKFGKHIAFRHKDKQRFTRAKTIGEDYTEDKIKERIDLAIMNKANPIKKRV GNVIDISTNEKVQSSKGYEVWARKHNIKTMADSIIKLREQGINSITQLDDLIKKSADDRQ DLLDKIKKVESEMKSLSQDMEDINTINKYREIYKYHKKNPEDKQFADEYYSELSIYKIAA KEILENYNKLPKTKEILSKLDKLQEKKNTLMQEYSLNKEQFSDLVQYRKNYENYYGKEVE R >gi|229269866|gb|GG666045.1| GENE 53 59602 - 60198 477 198 aa, chain + ## HITS:1 COG:no KEGG:FMG_1417 NR:ns ## KEGG: FMG_1417 # Name: not_defined # Def: TetR/AcrR family transcriptional regulator # Organism: F.magna # Pathway: not_defined # 1 183 7 187 196 161 59.0 1e-38 MKMEADERKKQIRQAAIKVFLDKGFRNTVMNDIMEATGLSRGGLYHHYGSTHEILYDIMM EGNLNRKDIIQKSIYDEGLILSPQLFSRMIIDKILADNDYVKLYVMFLCELKENDDLKEL YVKIKKESIQVFKELFSTLFNVLPSDETFEFMINIMNSGLMACEILNARENFTKNKIYLT EMIETYFINVMKKDDERS >gi|229269866|gb|GG666045.1| GENE 54 60203 - 61921 226 572 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 346 557 147 357 398 91 29 4e-17 MDLLKKYIKRNKAPYFISVLFAILGVISNLFVYIILSKMIISLIDGSQDFYYYINKIFLI LSCLIIKEVFMFLSTMISHKTAYKIIRDIRKSLMEKLFNMPLGDILNESTGKLKDIIVNQ VDNTETTLAHMIPEMTANLIGPIILFVYMLILDYRLSLISLIPLVIGGFFMTWPMKRMKV KFPQAVKIGQDMNNSVVEYINGIEVIKTFNQGEKSYRKYRDNVYKKANYYYDWMGENTRD YAISMSIAPVGILTIIPFGLYFCMNGSLDGGVFLTLIILSFGTIQNIMRVMTFEDDIGRM STIFEEIKNILSARELSHKNENLDIKNYNIEIKNVDFSYEKDKQVLNNININIEEGSVNA LVGESGSGKSTIAKLISGFWDVDSGSISIGNVNIKDMSLEKLSTVISYVAQDNFLFDMSI KDNIRIGNKNASDEEIIEVCKKAACHDFIMKLSDGYDTRVGEAGKHLSGGERQRISIARA IIKNAPIVILDEATSYIDPENEALIQDAISELVKGKTLIIIAHRLKTITDVDNIFVIKNG ELACKGSHEELLKESKDYHNLWETALKGEENA >gi|229269866|gb|GG666045.1| GENE 55 61914 - 63650 221 578 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 336 557 132 354 398 89 26 2e-16 MLSVFKKIWNFSIEEQVYLKKSIFANFFGSIFNALQFAAIYYAIFGIVNKDISFKTIGIS SLFLLISIAGVIISKNSSMLKQTHAGYFMAGHKRIELGEKIKKVPMGFFSSLSLGNLTTI ATTNLDNVETWVPTLCIMVFGGMLNAIVFILSLFLFSYKVGIVAIVGSIVFLMIIARMQK RSSKNADKIHEIQVSLTKEVLSTLQGMQIIKSYNLRGSNNKKLDKSFDSASEYSFDLEKT IMPYSLLAKIIIAITICLMLFISIKLYFVENGQIVNTIMILIASFVIFDGLITSGSAMAM LRMVENAIDSYSYVNDMEDMKEGSITEPIKNHDIVFKNVSFSYDDRQILKNVSAEIKENT MTAIVGPSGSGKTTFCNLIARFWDVNSGEILIGGKNIKDYKIENLMNSISMVFQDVYLFE DTIENNIKFGKQNASHEEVVQAAKKARCHEFIEALPDGYNTIIGEGGASLSGGEKQRISI ARAMLKDADIIIFDEATANIDPENEDKLKEAIESLTKNKTVIMIAHRLKTIRNADQILVL KDGEIVERGNHEELIKNNGLYSDLINAKTKAESWKLNN >gi|229269866|gb|GG666045.1| GENE 56 64052 - 64666 378 204 aa, chain + ## HITS:1 COG:SMb20367 KEGG:ns NR:ns ## COG: SMb20367 COG1309 # Protein_GI_number: 16264101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 4 115 3 120 230 61 33.0 9e-10 MAKRNVKDPEERKQELINIASRLFERDGYEKVSVRDILAEVNGAPGMFYYYFKSKEDIFL ACMETYFEEKLKNKLDILQNKEIDYEERIKILRELIVKDIGQFTTKYNFSKENSITDNSY RLWELIHYIGKFIDVYSEFIIEGIENKKIENNIGINRENVRSFAAFILYGAVGTIYNDYI IKGENKTNSSEAFGIISELFQRPH >gi|229269866|gb|GG666045.1| GENE 57 64774 - 66543 220 589 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 337 548 127 340 398 89 31 2e-16 MKKKKSIKDIISYSEIKKGQLVGGILFVSLGMLLSICPILVIYKVIKSLFLYGKLEQSTM QFCTYGLAAVVLSYCLTYIGGILCHKFSYVLIANLKKKILFHIGNLPLGFFTGDNKSKIR QVLGSDMNQIEGYFSHQLPNLISTLALILAMIIVMLKINLILGLTTLLIIFVGLGIQIAI MAKIIKSGGLEKNFAILDQINSATTEYVKGMPEVKIFGTGAKSFKTFSKSVGEYRDFTSS MTSMIRPGFVSFRMFILSVATFIVPVGILLMSRNNNLDFATVFIFYLILAPAISVPALKL RDFAEGMNLLNEVVLRIYEIIDQKELAIENSEEEIKGHDLEFENVSFSYGDEEVLKNISF CAKQGEVTALVGYSGAGKSTIGTLIPRFYDPSEGSIKIGGVNIKNIPMNALMDKIAFVFQ DSDLITDTVFNNVAMAKPGSTKEDVIKACKKARCHDFIEKLPDGYDTVLGKGTYLSGGEK QRIAVARAILKNAPILVLDEATSFADSENEYLMQEALSELVKDKTVIMIAHRLNTIEHAN QILVISDGKIAERGKHEDLIVADGIYKRLFDIYKKINIWQMDIEGSENE >gi|229269866|gb|GG666045.1| GENE 58 66540 - 68264 228 574 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 330 553 2 229 245 92 28 2e-17 MIRNITLGKMNNIRKSIILNILASISNLIPFIALAKIVETLFLNRGADSIDTSLLWKYFG IMAVFFLITFLLENLATKYTYELGYKTSADGRIELADHIRKLPIGYISGKSSAEILDTLM NDFFKVETAVTHQLPQFFSGICVAVLCSILFLIINVKMGIATLIGLPISVLLLTLMQNFQ KKIYLKTKKIRIKEEEDINEYLDAIKTLKAYNSLDDTLTKLQEDIDNSRDANIKSEKGVG SLTTIASMILRIGLPLMSLAGSYLFINGSLEIDTFLMFLFVGTRIFDPLELALVNYTGLQ MASVSGERIINLLNAKTMSGNSDVNESNKIEIHDVSFSYKESKVINNVSLDINENELTAF VGYSGSGKSTLIKLISRFYDPNEGTIKIGGVDLLTADPDKLMDKFSVVFQDVYLFKDTIY NNIKFGNEDASKYEIMNAAKMAGAYDFIVKKDDGFDTMIGQGGATLSGGEKQRISIARAI LKNAPIILLDEATSSLDPENELIIQEAISNLIKNKTVVVVAHKLRSVMGADKIVVLDKGK VEEVGKHEELIKNEGLYKDLWNYQEKSKEWKIVH >gi|229269866|gb|GG666045.1| GENE 59 68290 - 68880 612 196 aa, chain + ## HITS:1 COG:no KEGG:Olsu_0225 NR:ns ## KEGG: Olsu_0225 # Name: not_defined # Def: hypothetical protein # Organism: O.uli # Pathway: not_defined # 1 196 1 198 198 198 55.0 9e-50 MKTQKKSSKNAVTAGVLIALYFVTYLVIGAISMPVPVLFLLMPMLVALLAAPTYHMLLAK TKSATAIVIAAILPSILLVATGHIPIAPLVAVPAGIIAMFIAKGGNYTDFKKNTISHMFF SLNLFGGFLPIWVMREAFFESVIKGGLDQSFCNTVRAWTPIWMLPVMIIGTFIFSLIGSY FTKKILNKKLESAGVL >gi|229269866|gb|GG666045.1| GENE 60 68880 - 69608 209 242 aa, chain + ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 11 200 2 191 226 70 27.0 3e-12 MENSKFVLGSKYDLRTKLILLIGANILIFLGFDWIYQSLITLFFLVIIISDGYKKSAIRY ILFFVISVVLEKSLTYFSMNFLLNLTLFILAIGRKFLPCIIVGKWILNSTSVSSAVATLQ KLKLSKDSLIMISVIFRCLPTIKDEWSHINMAMKTRGINFNLINLIRKPTLIMEYFFVPL FVSVIEIGDELSQSAIIRGLDAPVNKTSRHLIKFRKNDIGVLILMILILSIVIFMKVSGW DL >gi|229269866|gb|GG666045.1| GENE 61 69605 - 70996 219 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 275 458 14 210 245 89 28 3e-16 MIEIRELSFKYKGGSDYSLKDINLKIKKGECILLCGRSGCGKSTLLKLMNGIIPEFYDGD ISGSVMVNGMNTFTTPIYKLSNNVGSVFQNPKTQFYTTNTTDEIAFGLENYGIEREVINK RIEEVEKELHLENLMNKNIFNLSGGEKQKIAIASIYALNPEIFILDEPSSSLDIESMKEL SLTIKKLKSLGKTIIIAEHRLWYLKDIVDRAIYLEDGKIIREYSMDEIENLSEDERIRTG LRHSDYKAIERFDDFETSNKGTLLVLKDLIFKRNTKIILSIEDLNFCYGNIIGIVGENGI GKSTLAKIICGLYKENKGKILKDDENLNIKSRLNESLLIMQEVNCQLFTDTVKDEIVLTS NIKDDNALDTWLKDMELKNISDRNPHTLSGGQKQRVIILSALLSDKKILFFDEPTSGLDY RNMKIVAKNIKKVKEEDKLILIISHDVEFLESVCDKVIDFTYL >gi|229269866|gb|GG666045.1| GENE 62 71669 - 72844 756 391 aa, chain - ## HITS:1 COG:FN1357 KEGG:ns NR:ns ## COG: FN1357 COG3547 # Protein_GI_number: 19704692 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 387 1 385 391 230 36.0 3e-60 MFYIGVDIEKNNHEASIIDSDGKLVSESFSFSNSIRGLEKFQKFISSFSIDSNNCIIGME ATGHYWLSLYSFLIDLGFSCVVINPIQSDAFRKMYIRQTKNDSVDSFVIAQILRFGEFSV SHFSDEDTFALRNLSRYRFALVDEVTDWKRKLVAILDQVFPEYSSLFSNIYGVTSKELLS KYPLPEDMLSISANELAELLSRCSKGRFGIDKAKEIQDKASNSFGIKFALKSFSFQIKQI INQISFLEDQILDIEEEISSMLNSFCPVITTITGIGDILGAAIFSEIGDISRFEKASQLV AHAGLDVTVKQSGNFNATDTKISKRGSPYLRRAIWLAANVAAFKDPALSLYYQKLRQRGK AHGTAIGAVATKLTNIIFAVLRDNKVYLPNI >gi|229269866|gb|GG666045.1| GENE 63 73232 - 73630 139 132 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484788|ref|ZP_03915104.1| ## NR: gi|227484788|ref|ZP_03915104.1| hypothetical protein HMPREF0072_0191 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0191 [Anaerococcus lactolyticus ATCC 51172] # 1 132 1 132 132 202 100.0 5e-51 MLQINYYISRLDVNLKVNDTISVSKINNNQINIYQDNCFKTLECDYEILNEVFSLVKEFG NREKIHKKFSKYYSIEEIDQFINVLINEGILLSSKELSSTYNHEKSHILLISDMEIDKEI KNILNLKNIPFF >gi|229269866|gb|GG666045.1| GENE 64 73749 - 74090 322 113 aa, chain + ## HITS:1 COG:L192240 KEGG:ns NR:ns ## COG: L192240 COG1918 # Protein_GI_number: 15672170 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein A # Organism: Lactococcus lactis # 42 105 85 148 152 65 42.0 3e-11 MLNLVMAPLNVNYKILRIKSLGDSNVTEFHLANLGFVKDAVVGKYNIVKKINGSGPLKRR IMDMGIIKKSEIYIREVAPLGDPVQINIRHYELSIRKADAELIAIEEIEKKED >gi|229269866|gb|GG666045.1| GENE 65 74291 - 74686 320 131 aa, chain + ## HITS:1 COG:no KEGG:TDE1508 NR:ns ## KEGG: TDE1508 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 20 129 19 126 131 65 34.0 9e-10 MSRKKILGYISAIIGILLVLAPKFITPVCPPMENGMFMKCHWMGNMTIGIGAVILVLAII LIVVKDSKISLGLSISNIAIGILEILNTQVLIGGCMKADMACRAITIPFCTLLSGILVLV NIYYCMKERHS >gi|229269866|gb|GG666045.1| GENE 66 74686 - 75363 301 225 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 203 1 201 223 120 34 8e-26 MESIIETENLSKSFKRGSNTLFAVKNVNFTLKEGDFVNIIGRSGSGKSTFLNLLSGLLKP TEGKIFAKGKNISDFSDREISKYRNEIIGFVPQSLGTLPNLNVLENVSLPYYLFKRDDSA YEKAAMLLDEMGILHLKDDFPKNLSGGELKRVLIARSMINSPKLLILDEPTSDLDKNTTM EIMDLLKKINSKGTALIIVTHELDILKYGNTLYQMEDGSLIKKGG >gi|229269866|gb|GG666045.1| GENE 67 75366 - 76703 1418 445 aa, chain + ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 7 420 1 407 433 298 43.0 1e-80 MNLLKKMTSVFAIMVIMISLTLTPAFAAETNYGNWVEVADAMSEHLEKAVEVYKPGDKDA KKAATDAVNVAYFKFYEKIGFEKTTMTAISGQRGSMVEHQFYRAKNSIKEDADPKEVKDE IDALITYLHEDAHTLDGTSGDSKSSGQSQEDANSLSTGQLLGELLKRFGTFFAVLGLTLR EGLEAILVVAAIAAYLSKTNNRIYLKGVYIGALLGIVFSAVLAGVFNIIANTVGEVESGM GQEIFEGIAMFLAVIVLFYVSNWMLSKSEVEVWNRYIKNKVEQSVSKGNYFALSFTSFLA VAREGAELILFFQGMRTGISENPMHMWIGLLVAAIILAIVYYLIAKVSVRLPLKPFFTFT SWLMFILCLSFLGKGIGELQEADVIGRTIVPWMNGWSAEVIGIYDRYENLIPQIILLVVT IVSVIYQNNRNKKIRAELEASQENK >gi|229269866|gb|GG666045.1| GENE 68 76713 - 77396 907 227 aa, chain + ## HITS:1 COG:TP0971 KEGG:ns NR:ns ## COG: TP0971 COG3470 # Protein_GI_number: 15639955 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Treponema pallidum # 63 227 34 204 204 232 67.0 5e-61 MLKKKNLFPVVMTLVCVLMFTACGKKEDTKANNTANTSTEEKAPAEEKAPAEGNKKEAGD AKAAAPGEDAGFEEFPIGDDQTKGPLVISGVYFQPVDMEPAGNSIPKEEADCHIEADITA SQEGSTLGYGVGDFVPWLKVKAYLQKKGSDHVQEVAFMPMNASDGPHYGANVKFDEGVGV YDVKFEVAAPGNDYLLHVDKETGVTGRFWTEPLVAEWTDFEWNGPQW >gi|229269866|gb|GG666045.1| GENE 69 77433 - 78716 964 427 aa, chain + ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 136 420 2 288 298 197 38.0 4e-50 MFPLYTFMGGEIILKIFIKVMEAGIAFSLMISLILAYYTTKESKYKKYVIIISLVLGVIA AIVSIIIRNIPNFINRTELNFWSMVPIVISVFLILIFMIFEDKINAKIYDNFISSSVVVY LVGICFYYLPYVFNQSNKFVYYGESAVSTIVLFRILGFVFGIIMMILSGLAIYKSSVKLE GKNLKIIVFLSLVCSGISQFNIIIQRFYSKGIIPRNVNFFRVIAFIANHENVFLFATMLI MIAIPVILYKQNIKVNEDYSNRAQLRKIKYRMKNKKHWAIFFLVVLFINTFSLTVGKAYS NKEQALSPPEDYQTENGMIVIPISSLEDMHLHRYLYKAKDGVQMRFFCIKKSEGSYGVVL DACEICGPSGYFERGDDVICKLCDVVMNRGTIGFKGGCNPIPFPYIVHDKKIKIAQKDLD ALSYVFK >gi|229269866|gb|GG666045.1| GENE 70 78725 - 80008 1010 427 aa, chain + ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 427 3 428 428 506 61.0 1e-143 MFWRIVKGALFRQKGKMALIAFTVALGASLATSMLNTMLGVGDKVNQELKTYGANINVLP KEASLLDDLYGMQEKEGQVQKYLKESELPNIKTIFWAYNIVDYTPYLNTWVSCNNDSKHT KMVGTWFNNHMNLPTGESVDTGMIRLKNWWEVQGEWLSENDSDSVMLGKIFADRNGFKVG DEIQLKSNNLDKKLKVKGIFSSGSDEDAFIYSTLKTAQEFAGVTGVVNKVEVSALTTPDN DLARKAARNPLSLTIKEREVWYCTAYVSAICYQITEVMTDSVAKPIRQVAESEGDILNKT TLLMVLITVLTLIGSGFGISNLITASVMERSNEIGLQKAIGASNGRIICIILVEIILTAI FGTVIGYGVGLLLTQIIGLTVFGSAIAPTAMVVPIVAILIILVTILGSIPAIRYLLNLNP TEVLHGR >gi|229269866|gb|GG666045.1| GENE 71 79998 - 81146 1021 382 aa, chain + ## HITS:1 COG:FN1353 KEGG:ns NR:ns ## COG: FN1353 COG0577 # Protein_GI_number: 19704688 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 6 382 2 400 400 325 50.0 9e-89 MADKQSKNKFYLKMIMTSLARRRARMLTALLAIAMGATIISGLVTIYYDIPRQMGKEFRS YGANMLVIPTNPDKKITNEQLDEVKSLIPSGKLVGQAPYIYTNAKINEQPYMLAGTDLKG AKENSPYWLIDGSWPEKSREVLIGNEVSKALGLKEGDKIIINTPKVNGEGSIDTNFVVSG VVTTGGKEEELIFMSIDDISQLVKDKNFDVVEYSIEAEQNELSKIVSNISQKDGSLTPQM VKRVTASQDIVLNKLQALVFIVTIIVLFIMMICVSTTMMAVVTERRKEIGLKKALGATNS SVIVDFLGEGAFLGVFGGLLGVALGYIFANRVSISVFARKVSFLPLLVPMTIIVCIVITI VASLIPVSKTVDIDPALVLRGE >gi|229269866|gb|GG666045.1| GENE 72 81158 - 81877 306 239 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 239 1 239 245 122 31 2e-26 MDILKLVDVSKIYGELKALDKINLSVEKGEWISIMGPSGSGKTTMMNIIGAMDKPSLGEV ILDGEDIAKKSPKELTAIRRDKIGLIFQQFHLVNYLSALENVMMSQYYHSMPDAQEAMEA LAAVGLADRAKHLPNQLSGGEQQRVCIARALINHPAILLADEPTGNLDEKNEYIVLDIFK KLHNAGSTIIVVTHDPEVGEESERMITLDHGKILKEEKMKRKRPVLDSVKKDQKLKEFI >gi|229269866|gb|GG666045.1| GENE 73 81874 - 82299 564 141 aa, chain + ## HITS:1 COG:FN1351 KEGG:ns NR:ns ## COG: FN1351 COG4939 # Protein_GI_number: 19704686 # Func_class: S Function unknown # Function: Major membrane immunogen, membrane-anchored lipoprotein # Organism: Fusobacterium nucleatum # 1 141 1 139 140 75 39.0 2e-14 MRKILNVLIFFSLGLVLVACGGDKKEEAPSVSYKDGTYHGESAKDERGGLVKVDITVKDN KIESCTMQNIDGDGKEKDESYGQSQNEGLYKIAQQAINLAKSYPDRLVEKGNPEGVDVIS GATGTYKQFIEACNNALDGAK >gi|229269866|gb|GG666045.1| GENE 74 82407 - 83501 779 364 aa, chain + ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 362 38 399 401 280 39.0 3e-75 MSSFIIFSLENGMKSLSDRMGADIIVVPEGYDSKITGAILRGEPNTFFFDKDILSRVKKI PGIEKACGQVYLATLSAGCCSFPIQVIGIDFSDDFSVKPWLEKQIKTPIKAGQVVVGANI VGDINHKVKFFNQEFDIRGRLAKTGMGFDNSVFMTIEETHRLAKEYEKIINHPVAKKDDI SSILVKVEKNKDPKTIQKLIKEEFKKEKVYPLLPRKIMTQVSDSAKNMLIYVYILIALIW ILAFFILSLVNTLSVKERKREFATIRILGATKKKLREVVLVESMLINGTGAVIGSVLSFV LSITFNNVFSSILNMPFLRPNIFLMILMLIIVIILGTLLGPISSIIAINKINKVELLLMQ RDND >gi|229269866|gb|GG666045.1| GENE 75 83683 - 83985 189 100 aa, chain - ## HITS:1 COG:L0466 KEGG:ns NR:ns ## COG: L0466 COG2801 # Protein_GI_number: 15672034 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Lactococcus lactis # 29 98 154 223 227 77 57.0 8e-15 MVLKNKGFNINHKKVLRIMREESLLCSKFKTRSRKYSCLDNSPMENFFGILKQEMYYGVE FKSYDELVSEIEKYIKWYNEDRIKIKLNGMSPVMYRLHSA >gi|229269866|gb|GG666045.1| GENE 76 84180 - 84719 409 179 aa, chain - ## HITS:1 COG:SMb20826 KEGG:ns NR:ns ## COG: SMb20826 COG2963 # Protein_GI_number: 16264314 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 1 177 1 173 177 77 33.0 1e-14 MPKYTKEFKIKLVMEYLSGESGGSPIIAKKYDIPEGTLQNWIIKYQSGGFDNLSKKQNQD KFTSEFQLSVIQYRQINNISFRQTAEHFNISNRSIICNWERAYRQLGLSGLEDNRGRPKK DMTKSNKKFKPNTPINESEREELIRLREENRLLKMKIIYEKKLQALLLEEEAETRKRQR >gi|229269866|gb|GG666045.1| GENE 77 84683 - 84907 102 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484802|ref|ZP_03915118.1| ## NR: gi|227484802|ref|ZP_03915118.1| hypothetical protein HMPREF0072_0205 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0205 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 131 100.0 2e-29 MAYTWLEWSVWINFENFQKPRMWEYINQYVSSNTLYHSGAKKEKNSPHDLNPKIRNTDGG VFVCQNTQKNLKSN >gi|229269866|gb|GG666045.1| GENE 78 85208 - 86200 572 330 aa, chain - ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 1 330 1 330 330 561 88.0 1e-160 MTYYDFVKDYLKVDECKNNKKYSSAGHTFCWKKEDSTYGEGLYWFYEGDGFIIDIHDFYI SEEVVQNNTYSMADYVSIYTSYIVSANGEKFNPYQTLTANSLCTFDFDNIRDDFVFLLHE NCYYLAVSIGFKKELLEKHLAAINIDTESFYSALLQPNQIILTKSLEKVAMEILNCKMDA PAADFFFKAKANERVSIVIDTYLNRKKYKIESDDNKALEDVARFLDDHFAMNVNQETLEK ISKMSGTKLKNLFKEKYGQSITEYTQRKRMNVAETLLLNTKLPIKEIAESVGYTSHSKFS IYYKRYKGKLPSEVRGLACDHQTLKCDCCD >gi|229269866|gb|GG666045.1| GENE 79 86361 - 88115 194 584 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 323 562 1 236 318 79 26 2e-13 MKIYKKLFAYVQDKKYLGFLAIVFSAISAVLTVYGFYLIYKFLDNLIINSDLSGAESIAL KSVITLTSGAIFYSVSGTCSHILGFRLETNLRKRGIDGLEKASFRFFDLNPSGQIRKIID DNAAQTHQVVAHMIPDSSQAIVTPVLVLALGFIVSIRVGITLLALTIIDGLILGAMMGEQ EFMKIYQEALSKLSAETVEYVRGMQVVKIFRANVESFKSFYKAIKDYSKYAYDYSLSCKK PYVLYQWLFFGLIAILIIPIVYFMTSLGSAKVILLELIMILFLSGVLFVSFMRIMWYAMY ISQGNYAVDTLEALYNDMQKDKLVHGNVNNFKNYNIEFDNVSFAYNDKAVIENLSFKLEE GKSYALVGSSGSGKSTVAKLISGFYNVNEGSIKIGGVAISEYSDEALIKAISFVFQDSKL FKKSIYDNVALANKGASRDDVMRALKLAGCDLILDKFPERENTIIGSKGVYLSGGEKQRI AIARAILKDSKIIIMDEASASIDPDNEFELQKAFKNLMKDKTVIMIAHRLSTIKDLDEVI VMDGGKIIERGSDKELMSSDTKYKRLQDMFNSANEWRVSNEGVL >gi|229269866|gb|GG666045.1| GENE 80 88099 - 89820 1616 573 aa, chain + ## HITS:1 COG:SP1435 KEGG:ns NR:ns ## COG: SP1435 COG1132 # Protein_GI_number: 15901287 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 1 573 9 581 581 936 91.0 0 MKEFYKKRFALTDKGARNLSKATLASFFVYCINMLPAILLMIFAQEVLENIVKSKGFYIA FSVFTLIVMYILLSIEYDKLYSTTYQESADLRIRTAENLSKLPLSYFSKHDISDLAQTIM SDIEGIEHAMSHSIPKVGGMALFFPLISIMMLVSNVKMGLAVIIPTILSFIFIPLSKKHQ VKGQKRYYDVLRENSESFQENIEMQMEIKAYGLSEEMKDKLYEKMDKSEKVHLKTEIGLI LIMSLSSIFSFISLAVVIFVGVNLIINKEISPLYLVGYLLAAMKIKDALDASKEGMMEIF YLSPKIERLKEIQNQDLQEGDDYELKKFDIDLKDVEFAYNKDTKVLNGVSFKAKQGEVTA LVGASGCGKTTILKLISRLYDYDEGQILIDGKDIKEISTESLFDKVSIVFQDVVLFNQSV MENIRIGKQDASDEEVKRAAKLANCTDFIEKMDKGFDTVIGENGAELSGGERQRLSIARA FLKDAPILILDEIAASLDVDNEKKIQESLNNLIKDKTVVIISHRMKSIENADKIVVLENG KLESEGKHEELLQKSKVYKNLIEKTKMAEEFIY >gi|229269866|gb|GG666045.1| GENE 81 89831 - 90412 625 193 aa, chain + ## HITS:1 COG:no KEGG:FMG_1400 NR:ns ## KEGG: FMG_1400 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 193 1 194 194 273 92.0 4e-72 MDTKKLKVKDLVSIGVFAVIYFVLMFGVGMMGMIPILFLIYPTVLGIIEGPVLMLFMTKV QKPWALFILGMISPLVMFAMGHTYVVAVLSLIVMIIAELIRKIGNYNSFKYNMLSYAIFS TWICSSLMQMLLAKEKYIELSMMMGKDYVDAMEKLITYPHMALVALGAFLGGIIGAYIGK ALLKKHFEKAGIV >gi|229269866|gb|GG666045.1| GENE 82 90412 - 91101 333 229 aa, chain + ## HITS:1 COG:SP1437 KEGG:ns NR:ns ## COG: SP1437 COG0619 # Protein_GI_number: 15901289 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pneumoniae TIGR4 # 85 229 1 145 147 224 91.0 1e-58 MPTFSANYPFNPNPISKLLVVFLTGLTVVHSLNISFELEIVCLIGILFYLNGYKKTFFKW IILCAILYALPNFMVLSNINPIIKMFLSLFIIFRMFLLPFMAASFMIKTSDVGAIISSMD KLKISKNLSIPIAVMFRFFPSFKEEKKNIKMAMRVRGINFKNPIKYLEYVSVPLLIISSN IADDIAKAAETKAIENPIAKTRYIPVKIQTIDFVYVLIITGLIVGGLIW >gi|229269866|gb|GG666045.1| GENE 83 91095 - 92459 223 454 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 259 451 3 209 245 90 28 9e-17 MVEIKNLSLDYGKDHIIDDISLSIAEGECVLFTGKSGSGKSSLINSINGLAVRYDNAKTK GEIFIDGNNIKDLELYQISMLVSTVFQNPKTYFFNVNTTLELLFYLENIGLAREEMDRRL NDMLEIFPIKNLLNRNIFNLSGGEKQILCIAASYIAGTKIIVMDEPSSNLDIKSIGVLTK MLKILKEKGISIIVAEHRIYYLMDIVDHIFFIDKGKLKKTYTRNEFLKLDTRDLNNLALR DKKLTKLEVPHLKGDGEYQIKDLSYKFTEDEYLSLKNISFKLGKIYGIIGSNGRGKSTLL RCLIGLEKKSKEEIYFKGEQLSKKERLKNSSLVMQDVNHQLFTDEVFSELSLGVKNFNEE KAKIILKDLGLEEFIERHPMSLSGGQKQRLAIASVMCKDSTFVYFDEPTSGMDYSNMEKI SKLIKKYRNKDKIIFIVSHDIEFLNEVSDEIFEI >gi|229269866|gb|GG666045.1| GENE 84 93595 - 94155 544 186 aa, chain + ## HITS:1 COG:HP0070 KEGG:ns NR:ns ## COG: HP0070 COG2371 # Protein_GI_number: 15644700 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreE # Organism: Helicobacter pylori 26695 # 1 155 1 154 170 82 30.0 3e-16 MIIEKIIGNVFDINEENLKINWLNMPYDHAHKKIQRFEYAGLDLGLKLSEEDRQRGLKHG DIIYRENNIIYAINIEELECLKLSMDEAKSFVNLAYIIGNRHAKLYWSEDGESLITPYEK TLEEMLKTVEGIKMDKVMAKLLPKNNLMAILPQGQVVDHHSHDHDHDHDHNHDHHHDHNH HHHHHE >gi|229269866|gb|GG666045.1| GENE 85 94085 - 94852 602 255 aa, chain + ## HITS:1 COG:HP0069 KEGG:ns NR:ns ## COG: HP0069 COG0830 # Protein_GI_number: 15644699 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreF # Organism: Helicobacter pylori 26695 # 18 255 20 254 254 139 35.0 7e-33 MTTITTTIMITITTTIITTITMNRTKYEEELILLQLNDSQFPIGSYSHSYGLENYILKNL IRDSKDTKKYLINYLKTSFYYNDLLAVYLAYNYFIEGKKDELLDLNIRLQAQKSQKELRE ASEKLGSRLISTVHKMDIAMPPKYYDYLDYHKKNDIIIHHSVAYALITASLDIDLTASLL SFAFNMAQNLVITAVKTVPISQFDGQKILYEIYDLIIDLVTKIDKLDEEYYFTSYPGVEV ASMQHEVLYSRLYMS >gi|229269866|gb|GG666045.1| GENE 86 94861 - 95472 865 203 aa, chain + ## HITS:1 COG:HI0536 KEGG:ns NR:ns ## COG: HI0536 COG0378 # Protein_GI_number: 16272480 # Func_class: O Posttranslational modification, protein turnover, chaperones; K Transcription # Function: Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase # Organism: Haemophilus influenzae # 2 203 17 218 225 265 63.0 3e-71 MDYVKIGVAGPVGCGKTHLIEKLVEEFKKDYKVAVVTNDIYTEEDANYLKDQGILERDRI RGVETGGCPHTAIRDDVSMNLEACEDLVRNFKDIEMIFIESGGDNLSATFSPDLADATIF VIDVAAGGDIPRKGGPGILRSDLLIVNKKDLAPYVGVDLEAMRKDTLAQRGDRPFIFTNI KNGDGLNEVYDWIRKHVLLEDLK >gi|229269866|gb|GG666045.1| GENE 87 95472 - 96287 686 271 aa, chain + ## HITS:1 COG:HP0067 KEGG:ns NR:ns ## COG: HP0067 COG0829 # Protein_GI_number: 15644697 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Urease accessory protein UreH # Organism: Helicobacter pylori 26695 # 4 258 3 253 265 132 29.0 9e-31 MKKTYARASRLYLEFENKDDTTILKDIYNSPPFLLMHTFKYGDFTKAMIMSSSPGILEGD MQEEKFYAKKNSKVLLSSQSYEKVYKMNENSFASRKVEIRGEEKSDFIFKLLPMILYKDA DFREDIKVDLEKDARLIFSNCFVAGRIGRGESFEFKSYKTNLDINLDGKLIYTEKNLIRP REQNINELGLMEGYDHFLSMVAINFSDENNIGEIRNIIDKHSLKRGLKGGASYSFRNDIQ IRILGKMGQDLIECEKEIIDYLIEKGGRICI >gi|229269866|gb|GG666045.1| GENE 88 96278 - 96580 398 100 aa, chain + ## HITS:1 COG:Cgl0084 KEGG:ns NR:ns ## COG: Cgl0084 COG0831 # Protein_GI_number: 19551334 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) gamma subunit # Organism: Corynebacterium glutamicum # 1 99 1 99 100 133 68.0 8e-32 MHLVPKDIERLMIFTAGEVARKRKERGLKLNYPEAVALISAELYEMARDGKTVSDLMQEG RKILTRDDVMEGVPEMIKDVQIEATFPDGTKLVTVHQPIV >gi|229269866|gb|GG666045.1| GENE 89 96590 - 96973 598 127 aa, chain + ## HITS:1 COG:HP0073_2 KEGG:ns NR:ns ## COG: HP0073_2 COG0832 # Protein_GI_number: 15644703 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) beta subunit # Organism: Helicobacter pylori 26695 # 1 124 4 127 136 128 51.0 3e-30 MIPGEIFYKDDDLILNEDFEAIEINVTNTGDRAVQIGSHFHFFEVNRYLKFDRSMAFGKK LDIPAGNAIRFEPGQTHRVRLIDIGGNGRVIGFNGLTNGVAHDIKKDEAMKNLIQKGYAN INSDGEE >gi|229269866|gb|GG666045.1| GENE 90 96974 - 98695 2127 573 aa, chain + ## HITS:1 COG:HI0539 KEGG:ns NR:ns ## COG: HI0539 COG0804 # Protein_GI_number: 16272483 # Func_class: E Amino acid transport and metabolism # Function: Urea amidohydrolase (urease) alpha subunit # Organism: Haemophilus influenzae # 1 573 1 572 572 736 65.0 0 MSFKISREKYGSMYGPTTGDKVRLADTNIIIEIEKDYAIYGDESIFGGGKTVRDGMNQSS TASYASGTCDTVITNAIILDYTGIYKADIGIRDGIITGIGKSGNPDMNDNVNPGLVIGAS TEIISGENKIVTAGAIDTHVHFISADQANTALAGGTTTLIGGGTGPADGTNATTCTPGPN HLEAMLKSVEGYPVNVGLLGKGNCSSKEPLYEQIKAGACGLKIHEDWGATRAVINASLEV ADEYDIAVAIHTDTLNEGGTIEDTLDAIGGRAIHFFHTEGAGGGHAPDQIVAAGFNNVFP ASTNPTMPFTINTSDEHLDMVMVCHNLDKTIEEDVAFADSRIRPETIAAEDVLQDMGVFS IMSSDSQAMGRIGEVVMRTWQTASKMKDQRGALKEDEGNNNDNFRAKRYVAKYTINPAIA HGVSEYIGSIEVGKRADLVLWEPKFFGVRPKQILKNGLIIMAPSGDPNASIPTPQPVIYR RMYAAIGGGIGNSCFTFVSKASYESGIKEKLDLKRMVLPVHNCRNIGKKDMKLNSETPNI KVDPETYEVTIEGKKITCDPVDKVALGQLYNLF >gi|229269866|gb|GG666045.1| GENE 91 98997 - 100022 872 341 aa, chain + ## HITS:1 COG:CAC3407 KEGG:ns NR:ns ## COG: CAC3407 COG1073 # Protein_GI_number: 15896648 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Clostridium acetobutylicum # 58 299 150 397 431 120 34.0 4e-27 MKKKFFRIFSIVIILVVLVFILRIYNDHKYKDNNALKFPEYFKDVTNISLYPTDIDGVNV TYVDEGRMQGFRFVPKEKSHKGLVICFGGSEGSPNFENAELLAKEGYETLALFMFGMKNQ EQTLRKIPLEQFEDVIGYINRNIKDSKPISVLGASKGAEYALNLASKYPEIDNLILMAPS SYNFAGLDFKDYGSSWTYKGEELPYIDIKKSSFNSFLKNIIVPAIIKSPISFKETYNSAI EKDSSSREKLIPVKNIKANILMIAGEDDLMWDSLAMANKIKEQNPKAKIYSYKGAGHIFA GNGILDLGKIIVATGGTAEGNEKARSESRKAIDAFLKENHK >gi|229269866|gb|GG666045.1| GENE 92 100436 - 101056 570 206 aa, chain + ## HITS:1 COG:CAP0083 KEGG:ns NR:ns ## COG: CAP0083 COG0500 # Protein_GI_number: 15004787 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 21 138 1 124 254 78 39.0 7e-15 MIDKGNKNFWDRFAKLYAPFMKKDQGVYDEVCEYILPYLKKDMDVLELACGSGQFSFALS KKTKSWIGTDFSEQMIIEAKKRGEYENLIFETADATDLSYANEKFDCVLIANALHIMPNP ECAMKEIYRVLKPNGTLLAPNFLWTEGKERKIIKTLMSVLGFKMYQEWNKNQFEDFVEKH GFSVVEIKLVYGGLAPIGVMIAQKYS >gi|229269866|gb|GG666045.1| GENE 93 101114 - 101290 90 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484818|ref|ZP_03915134.1| ## NR: gi|227484818|ref|ZP_03915134.1| hypothetical protein HMPREF0072_0221 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0221 [Anaerococcus lactolyticus ATCC 51172] # 1 58 4 61 61 90 100.0 3e-17 MLIEGENSKISSLYLIVILNIALRISHFDKPKTMHDSNIISIDSPSENSQNKYNFIDT >gi|229269866|gb|GG666045.1| GENE 94 101479 - 102285 780 268 aa, chain + ## HITS:1 COG:no KEGG:Apre_0733 NR:ns ## KEGG: Apre_0733 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 264 1 264 266 223 52.0 9e-57 MVQIVEIEDYKNKKKKIHDLKKDLENLIFERDNLLYVVCENIQTSYMLTFGSLTYRVNKA FNEYLRLRRKKSLIQARINRQEKIDLGEIEKKLDIEFHDYKEKLQDTVSQLKAALEHSRA KALSEEDTALIKKIYKKIVKKIHPDINQNITDKEKELFVASTESYKNGDLNTLQIIYTIV TSGEIEDDESLSLKSMEEEIERLEDLIAKIKSSIKTIKSIPPYSWRIYVEDEEKKAEKLN ELKEMLKSYKQAIRTQEEYIKELLEDKK >gi|229269866|gb|GG666045.1| GENE 95 102282 - 102683 483 133 aa, chain + ## HITS:1 COG:no KEGG:Apre_0734 NR:ns ## KEGG: Apre_0734 # Name: not_defined # Def: HIRAN # Organism: A.prevotii # Pathway: not_defined # 1 133 1 133 133 178 69.0 7e-44 MTDLIKKDQNNLIDYLVNTGGEIDIPRPFEQDIYLFDTYVAGTTHVEGIEGIYSTLKIED KLVFYREIENEHDPQAIRIETLGKEKIGYVPRQDNVVFSRLMDAGKVLFAKVMEKEMRGK WARIKIKIYLHES >gi|229269866|gb|GG666045.1| GENE 96 102690 - 103295 520 201 aa, chain + ## HITS:1 COG:no KEGG:Apre_0735 NR:ns ## KEGG: Apre_0735 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 198 1 198 202 187 45.0 3e-46 MYYNYEWIGDNICIKDSHVMNFEPISGNNAFIISHHVRDKLKIERGVKSLLENGFRYFNI FGEFSDLWAKAISIRSKTSNKIKIESSKIEMSRMVYDLAMMKVLKPDLTNYVISDDEYFT EYLVEDLEKIISGKSTFTPYDWKEFKEGFEFSYNKKDAIISVSKDIVIGFLGDEKTFDTI NDAFYYKVFDGKSLYEIWEEI >gi|229269866|gb|GG666045.1| GENE 97 103460 - 103672 123 70 aa, chain + ## HITS:1 COG:PAB7155 KEGG:ns NR:ns ## COG: PAB7155 COG1476 # Protein_GI_number: 14520844 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pyrococcus abyssi # 1 65 1 65 73 78 66.0 3e-15 MKNRLEEIRKHKGITQEELAKILEVSRQTVGSLENGRYNPSIILAFKIARYFEMAIEDIF IYEEENVNEE >gi|229269866|gb|GG666045.1| GENE 98 103656 - 104054 332 132 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0424_0516 NR:ns ## KEGG: HMPREF0424_0516 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 4 132 5 133 133 120 49.0 2e-26 MSMKNKKIWYIGYVIGFISLVALFIFKDDETLSRILPFIFTTSVTISSVSLGHNRRMEED PFYRINVNDERNEKIRDKVNAAMTPILMLIMGLAAVICFSAKAYLPAIILALGIISFPII TFFVSSYYEKKY >gi|229269866|gb|GG666045.1| GENE 99 104239 - 105483 784 414 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484824|ref|ZP_03915140.1| ## NR: gi|227484824|ref|ZP_03915140.1| hypothetical protein HMPREF0072_0227 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0227 [Anaerococcus lactolyticus ATCC 51172] # 1 414 1 414 414 760 100.0 0 MLKFRFLSYTNFGPMAQWYEKMAKEGWQIEKIILPFIHQFKKCEPADIKYQFTIAPNETW YVKFSKEELKDYDEMAEEYGWHMVDRSFNMNLYQVDEKGSNSLYNDDFYEIEILNKGIKG ELITISLNLLVFVFLALSSIARLRSSDIYYSNFPFFMAPAVSLFLILSLLSLGDYVSFKR RNSEVKAIKDLKFTGLGIGKLQAFLPVLSIVLIILSWIALVIHQLEMGYGLTILISVIPM IFMVILISYFIKKVKLMDAQKGQKKFLFALIPVIMFVVFSISNLGIFAKLALKDDLQTKE IAGFSVRKESTSFLAESCEDYMADSNDLNIRKTVVNSEGLAEDLFNRILRNAKNHPYRAE FVKDISKDFSYDKVYSLSDENSYLILKGNMVLEVDGNIYDEKVTKDIEKILEAK >gi|229269866|gb|GG666045.1| GENE 100 105483 - 105794 437 103 aa, chain + ## HITS:1 COG:no KEGG:Clocel_3823 NR:ns ## KEGG: Clocel_3823 # Name: not_defined # Def: transcriptional regulator PadR family protein # Organism: C.cellulovorans # Pathway: not_defined # 1 96 1 96 105 92 47.0 8e-18 MARDQFQTLTEPMYFTLLALGEVRNGAEITSWVEEITKGRIKLAPGTLYALLAQFLENDL IKRVEVEKKGKHYVITEEGRDLLDEEVRRLRLLLSNYDKYFTN >gi|229269866|gb|GG666045.1| GENE 101 106008 - 106889 602 293 aa, chain + ## HITS:1 COG:SPy1308 KEGG:ns NR:ns ## COG: SPy1308 COG0657 # Protein_GI_number: 15675257 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Streptococcus pyogenes M1 GAS # 7 291 33 320 327 60 23.0 3e-09 MFLKNKEEMLEYAKGENAKVVFDLDKAKKMARKKNYYLFDREVMGSRLLTYQKNKKTADG AIFYLFGGGMITQPNKLDFTLSERIMEKTGKDVWFLFYPLCSADVNVRKTYEVCFETYRL MTETYKAQNINVLGFSSGACLSLGIFLHNNALGRPLPMPGKIISVSPGGIPDVKLDENKE IWNKLKKLNYKDVMIDPTYLITAREILKGNEDLPEYMLDGTRGDFTDFPKTYFYYGGDEC LYAFAEEFKKTMDKYKASYEIRVGEGMCHCYPLVRFFKEGRIAQDEIIELLKA >gi|229269866|gb|GG666045.1| GENE 102 106940 - 107419 297 159 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0573_11544 NR:ns ## KEGG: HMPREF0573_11544 # Name: not_defined # Def: hypothetical protein # Organism: M.curtisii # Pathway: not_defined # 1 159 6 164 164 176 54.0 3e-43 MVLAVLLTLCLIFFAICYLGTGTDEKNLKNYMSYPEEVQAKIKEIEEYRGKYREKSKISI IMANFVTFSILFLLVGFKIRQLSFAQNFIDLLILGQGLNIFDLVVIDLLWWRRTKRIRLS KIPDQSLYQNPKKHIESFIRAFFMYFLIALIDGYILTLF >gi|229269866|gb|GG666045.1| GENE 103 107459 - 108202 654 247 aa, chain + ## HITS:1 COG:CAC2472 KEGG:ns NR:ns ## COG: CAC2472 COG0596 # Protein_GI_number: 15895737 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 1 246 1 247 250 63 26.0 4e-10 MNFTCYGEKSNKSILFIHGLASTADLCFKPLLPYLTDYDVIFCELDGHCDSCINDMISME KTIEDIESFILNELNGELYGLCGFSMGGTLAVDLISRDNIRVEKVLLDAPITVDLGLMAY PCTYAFIIGTNIIKKGKKIPKCLLDLVAGKDNTSIIEMMYAKISKTTIKNVCNYIYHYKF SENLKKYPKPVLFWRGSEEPIPAKSQKNLQKYLPQITVEVFENMGHGQFLHERPKEYAER LKKFMDD >gi|229269866|gb|GG666045.1| GENE 104 108245 - 108682 122 145 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0373 NR:ns ## KEGG: HMPREF0868_0373 # Name: not_defined # Def: GNAT family acetyltransferase # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 143 1 143 146 157 50.0 9e-38 MEIREILKADLTKLSRLMVEVYNAPPWNDKWTEETALESLSSLCDFPNFTGYLIADVDEI IGAILGHSRRYASGTTYYIDEFFISEKYRRLGLGENLYKTTIKKLKKKSISGAFFTTLKN SPAYNFYIKEGAWDLEDSACFYHKF >gi|229269866|gb|GG666045.1| GENE 105 108766 - 109416 576 216 aa, chain + ## HITS:1 COG:CAC0524 KEGG:ns NR:ns ## COG: CAC0524 COG0745 # Protein_GI_number: 15893814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 215 1 221 228 140 40.0 2e-33 MKRILIIEDNEDIGLQIKRYLIKNGYEVDLAKSFYEATYKMKVDFDVALLDINLPDKEGQ HLIERLKEKDIRVIVTTVKNDEDFIIEALDQGADDYLTKPFSLAILRARIDAVLRTLPIS QDKSISYKDIKIDLNESKVYFKGENIDLTPLEYEILLLFIKNPHRVYTRSQLLEIFWEDR DKFVNDNTLTSTIKRIREKLDREVISTVRGIGYRMD >gi|229269866|gb|GG666045.1| GENE 106 109417 - 110277 705 286 aa, chain + ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 12 282 46 327 329 127 33.0 2e-29 MVYVFWIISLFLLYYFLEKRKKKRINEIIDLIENMKNQNYKIPMKQDDFSILEDKTYKLF IEIVEAKETTSKNSEKQIEYLEDIAHQIKTPITSMVFSAENLEIDYPDNDDIGILRRQIQ RLNSLSDILLKLSSLDANKELMKKEEINLDELVTYALDALDIKRSTSIKIENNLKENIIF GDFYWLTEALINILKNADNRPDCDQIVISSYKNPLYTSLIVEDNGGGIDKDSIKKIFKRF YKTPDSKGFGIGLAMAKTIVEKNNGLISVSNTKEGARFEMKFYNVT >gi|229269866|gb|GG666045.1| GENE 107 110329 - 111009 337 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 220 1 218 245 134 34 5e-30 MEILKVENLRKEYGEGNSKVVALDGVDLTIERGEFVAIVGPSGSGKSTLLHIIGGVDSPS YGKVYIDGNDISQYSSKELALFRRRKVGLIYQFYNLIQNLTVRHNIELPLKLDKRKIKED VLEDLVKKLGIESKLDSFPSELSGGQQQRVAIARSLIYKPSIILADEPTGNLDRKNSKEI IEIFKYFNKTLKQTIILITHDEKIALEADRIVTIVDGKIIGDEKNE >gi|229269866|gb|GG666045.1| GENE 108 111002 - 113434 1529 810 aa, chain + ## HITS:1 COG:CAC2731 KEGG:ns NR:ns ## COG: CAC2731 COG0577 # Protein_GI_number: 15895988 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 3 720 17 784 875 83 20.0 2e-15 MNKKNFPIFISVFIVSLFFTVVFYFVKVNLDANYMETRATNFADAHIDDHLSEEDIEKLR EIDGVKEAGRLNMDFTSAKLDDDLVVIYRQDNHINKMREFSFTEAGRFPENPNEIMLSKS LVEKHKLKIGDEIPISFGKRFLGKKELDPTNSKIEKESFEKNQIKSYNLVGIYEDVYNKY AGLSYGLIFDTTKDPQPAVLRFDDFVDVHLNKKIFEDEITKRLGRKIEMRFDERIEKYYR VNDTWLEKIMAKAMMIFFLLSMIVIFIFFTRNIFWVWGLRKIKELSIYKSIGSTDFQIYK LLFKEAGLISIIPVLLGHLSGFFLIYGLYSYSQKNLEISKFEYVTFNPLLTGLILLVSFL VMSLSIIKPARKISIINIIDGIRGNVDLSMSKKKKNEDLWKELRNNNLSSIKSQRYISAI GILIISMFILSISISKYFRDYYDEDSSYNIFTTYYSSDKKVPDVLSYIEKELGSQKSFIY KDKYIGVKNNLDLSNQAKKYKLDEKIKKILKKKSQEYLQGNLIAMDIDDLEKLGGSKGEF ILYNKVQADPLEPIAKAKMVKYFKDPKNIDISMVGFEKKIKISKEIYDTGEFEFKPFPFV VNIFTDYETYFDLVEEAKDDKYLNYPYTLKMKIDDKDLSSAKEFIENKLRESLQINERYD IFVGKEIEEQEASSLKYLLYISLAVGIIIFILNVTNGYSSINISLISRKKEIGSLYSAGM DIDELKENYEKEFFLEQVKSFLLVSFISLTVMLIISILSPQFSLPILLKYFDYKMYLGFA LVVYVINLLIYHLSLKRILDRPTIDLIRTE >gi|229269866|gb|GG666045.1| GENE 109 113567 - 113941 307 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484835|ref|ZP_03915151.1| ## NR: gi|227484835|ref|ZP_03915151.1| hypothetical protein HMPREF0072_0238 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0238 [Anaerococcus lactolyticus ATCC 51172] # 1 124 1 124 124 222 100.0 6e-57 MGNFKKYIIRELSPEPLYIIDISWNHEGLKVTLENKSDLRKICLLFDETVYLYQDTSEVY KPSWHIGSESDYYPFYYSKKSDLIDKLKKDVDHVRDDEIIHFVIIGLDDIVDVLTTDLPK VFKL >gi|229269866|gb|GG666045.1| GENE 110 114062 - 114589 345 175 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_1928 NR:ns ## KEGG: HMPREF9243_1928 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 174 47 220 224 101 35.0 2e-20 MPYWIFCLGLGVLTSAIFRYITTDALFYDDFKNLDNRKDRLNYILSKNIFTLFFLAGFIL ILYILSFLATKLGFVNENEVNLVLVFKFLVYILASENIILMLNNKMIPSYKSGHKRNIKE DIIIGTENLKSMIPSLFVNIILIIFIFMFKIDLTTFAGIVYLLASIFIFAIYKTC >gi|229269866|gb|GG666045.1| GENE 111 114631 - 115398 771 255 aa, chain + ## HITS:1 COG:MTH1624_2 KEGG:ns NR:ns ## COG: MTH1624_2 COG0551 # Protein_GI_number: 15679619 # Func_class: L Replication, recombination and repair # Function: Zn-finger domain associated with topoisomerase type I # Organism: Methanothermobacter thermautotrophicus # 207 250 78 121 128 61 54.0 2e-09 MSDTMSIIIGVFCILLVTVFRSQFKGKIGEIVSAKFLNKLDKDKYRVLNDIKIDNPSNHT KTSQIDHLVISKYGIFVIETKAYKGKIYGKEYSRNWTQYLGSKKYEFMNPILQNYGHIKA LEALLEEVYPKMKYFSIIAFSPEANLKDVEVQDAKLCRISQVGKLIEELSVEEIYNEEDL EKILSIINSNKSHQTDISHVMDINKIKKENEKKIEEGICPKCGSKLVEREGKYGKFLGCS NFPKCRFVVSGKKDK >gi|229269866|gb|GG666045.1| GENE 112 115410 - 116276 618 288 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484838|ref|ZP_03915154.1| ## NR: gi|227484838|ref|ZP_03915154.1| hypothetical protein HMPREF0072_0241 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0241 [Anaerococcus lactolyticus ATCC 51172] # 1 288 1 288 288 522 100.0 1e-146 MINNMLKMIRKKQFLYFVLYIGSFPLLYLCFILCAKIEFIPLFNNIFLGISIFVFFAYNI FFISKFTDLNINFYLKLLSTLLMVGLGLLAGYVVLIMSIFAFKDSIPFTYDGEKYYLLNE GWVDFDYVVYRKDFITMDKMTFEDSEKTFTNLSKVTNKEARDQLKFYFHKDKQIVKTNNN QEDIEQKENLSSSEFLNNFGLEDVKKIPNSSYGLIEVDRAGARSRWFFVEINDDKIKFIS EIPDTSPDISGSVKEDGSILLVCKDINGNEKQYKSSDFGKTFEPVNKK >gi|229269866|gb|GG666045.1| GENE 113 116416 - 117618 1293 400 aa, chain + ## HITS:1 COG:MTH760 KEGG:ns NR:ns ## COG: MTH760 COG0025 # Protein_GI_number: 15678785 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Methanothermobacter thermautotrophicus # 3 396 6 394 399 261 44.0 2e-69 MILSLGLIVIVGMVYAKIFDRLRLPRIIGMLLTGIILGPQVLNLLDKNILDISADLRSIA LIVILLKAGLSLDIGDLKKVGRSAVLLSFLPASFEILSYAIFVPKLLGLHLVDGLLMGAV MAAVSPAIVVPRMVKLIDEGYGKDQSIPQMILAGASCDDVFVLVLFSSFLSMAKGSEFSF KSLFKVPISIVLGIGLGIVIGYLLYLFFERNYKNGAYIRNSSKVIIILALSFLLVSLEGL VKNIVPISGLLAVIAMASSYKIKANEGVVERLSEKFAKLWIFAEILLFVLVGAEVDIKYM TAIGSVGILLIFLGLLIRSIGVFISVSGSKLDKKEKTFTILAYTPKATVQAAIGSVALAN GISSGMAILSIAVLGIIITAPLGAILIDKSYKNLLKKASN >gi|229269866|gb|GG666045.1| GENE 114 117652 - 118425 827 257 aa, chain + ## HITS:1 COG:PH0762 KEGG:ns NR:ns ## COG: PH0762 COG1351 # Protein_GI_number: 14590631 # Func_class: F Nucleotide transport and metabolism # Function: Predicted alternative thymidylate synthase # Organism: Pyrococcus horikoshii # 6 257 2 239 243 160 38.0 3e-39 MAETSLKVTLLNYTKDGEETIAQAGKLCYSPVGVEEISKKQDQESIAKYVKMLASLGHLS PIEHISFTFAVEGVSRTLTHQLVRHRLASYSQQSQRYVKLDGFEYVIPPHIKEDLEARKI FIETMQKDQEAYDKLAEILTKKHYDVLINKGEEEKSAKRKAIKMAIEDARYVFPNACETK IVFTMNARALLHFFNLRSCNRAQWEIRDMSDQMVKLVKEIYPNVFASAGPSCVSGPCPEG KMTCGKINEVREKFKNI >gi|229269866|gb|GG666045.1| GENE 115 118500 - 119201 329 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 4 217 2 218 245 131 36 5e-29 MSYIELNEVSKKYKSGQSEILANDRISFNLEKGRLLIIVGASGAGKTTLLNIIGGMEQAS SGDILIDGKNLSKLNENELTKYRRDDVGFVFQHYNLIPNLTALENVELASEISSESLKAD EILDQVGLSKREGNFPSQLSGGEQQRVAIARALANNPKLLLCDEPTGALDYKTGKNILKL LQDASRKFNSTVIIITHNSLIKPMADEVIELKDGRILNAYTNENPVSVEELEW >gi|229269866|gb|GG666045.1| GENE 116 119203 - 122493 3172 1096 aa, chain + ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 7 1096 8 1136 1136 493 32.0 1e-139 MNKTYLKNILRDIKKTKGKVFSIGVMVGLATMVIVALNLTGPSMRKSLKQSLDTYHHPDI IVKSTYPMDYEDKILLENDSDIEDISYIKTIDLMDGEKIIRLKSYDKNFSKIHLEKGNLI KNDKEIILDKTLEKYYKIGDTINLSYINDDQKENSKIRNISFRIVGFFATSEKFMEDMRD ISPLGKKEIEGFAFVNPENFASDKFNEINISYKNSTDMDKTSDEYISFIRDKKEKIEDDI YLRPKEVLEKIKTEANEKISDAEGDINEAEDKLTSTERDLLDAKKKLDDGFNKYETNKAN FEKRIKNAENKLSKSRQKLEDGQIKLEEGKEKLATSKKEYESKIQETEKLLDDKLKELNA GKSQLEEKKLEIQNGLDKIDKTFSEQKEALVNQTGGDLSLSTAMPSEEEMKSKLDEQKAP LLSALKEIEAKETEINASFVEYNKGKADFEAKKQEGLTKIKAGQAEVDKNQREINQGWTK YYEGRDKLAFNKKDGKKKLEDAYKKLIKSKADYEKGLKEFDDKKLEAEEKIHDGKKKISD NKEALVKLRDPEYDVETIFDNQGIDTYYKNSLNMDSLSKVFPVFFYMVAMLVTLTTMQRY IQEQRLINGTLKSLGYANKMIAKRFYIYGLIPTVIGSIIGGILGRLIIVGVIFDAYSTGF EILHASYVNSITVIIASIILSSLLVSLTVFFTSKSTVNETPARLLMPLAPQGGTKILLER IRPIWKNLSFMQKITARNLFRYKSRMFMTIFGVAGCTALIFFGFAMIDSLKDTASIQQNE LHNYKAVAILDEKASDTDRRNYQEKISSYEILEIKNNSANLEKDKINLDISVVVPKDSKK FKGFVNLRKDRKSPVDLEKAGAVLTENASKKLGIKVNDKIKIKLDDDLLEIKIGGIAENY VADYLYISKDYYENLSKRAIKVNANYIKGNPDQIIEKLENTDSVLAVINTGKAYASMDAL LANLNLVIVVITLISSILASVVLYNITDINVSERKRELATIKVLGFYPKEVTSYIYREIF ILTILGIVLGFGLGYIMFRYIIDLVAPRNIMLAYKLHPLSFIVSAAITLILSLIILIYVH RKLKKIDMAEAMSSGE >gi|229269866|gb|GG666045.1| GENE 117 122574 - 123143 504 189 aa, chain + ## HITS:1 COG:CAC1385 KEGG:ns NR:ns ## COG: CAC1385 COG0406 # Protein_GI_number: 15894664 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Clostridium acetobutylicum # 1 187 2 190 191 83 27.0 3e-16 MKIIFVRHGLTMANIEKKYSTPETKLEESGLYILDKTKEHLKNYEIDEVYTSGLIRSQET AKILGFDKYLVDERLNEMDFGDFKGKSIFEVREDYKNFFEQEKEAYFDLSYPNGESRRDV IKRLSSFLDEKSNNDKNILCISHGIAIRSSLFWILKDLSNWQSFWIDNGSLTVYNIKDNK KLIESVNII >gi|229269866|gb|GG666045.1| GENE 118 123140 - 124153 735 337 aa, chain + ## HITS:1 COG:BS_yhaO KEGG:ns NR:ns ## COG: BS_yhaO COG0420 # Protein_GI_number: 16078055 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Bacillus subtilis # 1 213 5 235 408 83 31.0 5e-16 MKFIHLADCHLGDSFAFKSELSDKIRANNKKSLESILKNNKDVDFLLIAGDLYERSLFTL RDYKELFKLFHDFGKDIFYVAGNHDYIGSDNYDILKMKPANLHIFFDKEISYYEINSTRI YGLSYSDRIYKDEFPYDINLDDDFFNILLVHASINKSEDKYLDLYLDKLKEIGFDYVGLG HIHKWGNFGNNIYYAGSIEPSDFSDVYDYGYILYDQGKISHVNSSIMKFYDMNLCFDDFE NDSNLISFINSRLDPNKENYLRINLDRQVNINKLRKEINADYIQIKIDERASLYDLVDFY PNSLLEKYREKFPHKLDDIQARALELGLDAIYRSKDD >gi|229269866|gb|GG666045.1| GENE 119 124125 - 125960 1376 611 aa, chain + ## HITS:1 COG:BS_yhaN KEGG:ns NR:ns ## COG: BS_yhaN COG4717 # Protein_GI_number: 16078056 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 8 240 1 219 963 62 29.0 2e-09 MRYTGARMTRIFIEELNIKSFGKFQDKTIRLNPSFNLIYGLNESGKTTLKNFIEGMFYGF DEGKLRTSFSNKREIYRPKSSYVYAGEMKLTKDGDRFLLYRDFDSGDYRVTNLSENKEVD LKKSDLNAPGKYFLGVDYDIYKAYISSEQIQKISTDSKKKILEKLSANDIDYNFSIKKSL EILDNRLKELGTERAYTKPYYKTKEKIEILQERISEIDRLKKDFYKSYQKLDEDRNLLTR YEQECEHKKKLNQTYNKRRSDENFKSYQNWSNKLFNIDRELESYDDIKFLEKDKIDFVDD NRDYKLIYILTILVLILIAIIFSKFFILLFTIPFIYLIFNESYKDEGKIASEYNNLRHRF NEYGSLISEREKIVEVLDILKKQDLDSNQDVDDIDFNFSAYDNLKELNDISNLEKEIKDL SAIIHVREKNLLSIDNILQDEATLRDEFNYQTEKFNKIKEEIEAINLAKNMILQISDENK ADIHKLNNDIKNILAESSKSKLDISFDNNLDINIKDKLNFTYTDDQLSKGCYDQVNLAMK LSVAKESIKDSFLIFDDAFINYDIERLRRFLYLILDESLSRQIIYFTCHKREEEFFEAEN IYVNFIQLGDQ >gi|229269866|gb|GG666045.1| GENE 120 125957 - 126637 381 226 aa, chain + ## HITS:1 COG:CAC0640 KEGG:ns NR:ns ## COG: CAC0640 COG1768 # Protein_GI_number: 15893928 # Func_class: R General function prediction only # Function: Predicted phosphohydrolase # Organism: Clostridium acetobutylicum # 2 225 3 228 231 223 50.0 2e-58 MIYALADLHLDYTEAKSMEVFGEAWKNYQEKIFANWKNKIKEEDTVLVPGDISWAMDIKN AEIDLAKIDKLPGKKILMKGNHDFWWSSLNKLNQLGLETIEFLQNNSFEVEDYLICGTRG WISRDSRDFTDHDEKIYKRELLRLENSIRSTKSDKKLIINLHYPPINADGSLNEFFDLAK EFKAHTLIYGHLHGNGHRLIKEGIFEGVKLVCVSGDYVDFDPVRIG >gi|229269866|gb|GG666045.1| GENE 121 126637 - 127161 658 174 aa, chain + ## HITS:1 COG:CAC0650 KEGG:ns NR:ns ## COG: CAC0650 COG1437 # Protein_GI_number: 15893938 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate cyclase, class 2 (thermophilic) # Organism: Clostridium acetobutylicum # 3 173 2 175 180 66 29.0 3e-11 MQREIEVKVLNIVPKEMEEKLLSLGAEKLSREFQTNYTFEPTDGEFKKGYLRIRESQIDG KKNPIELTFKEVKNDRDVRINNEFTVHIDSVAMMTSILDKMGIKLKYKGEKERISYRYKG QRFDIDTWDKNTYPYPYMEIEFTNQSKIDEIINDLGIEKSMVTTKSISDLINEL >gi|229269866|gb|GG666045.1| GENE 122 127215 - 128141 963 308 aa, chain + ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 1 303 1 304 307 373 57.0 1e-103 MISIKNLLNSHDLTKKDLLEIIELGNAIYKSPADFSHSADGKLLGTLFFEPSTRTRLSFE SAMLRLGGSVVGFSDASVSSAKKGESLQDTVKTVSQYADIIAMRHPQEGAAYLASLAADC PIINAGDGGHQHPTQTLTDMLTISNYKESFENHVIGICGDLKYGRTVHSLIKILNLFEGN KYILISPEELKLPQYVKEEVFDENSQYEEVRSLDEVIDKIDILYMTRIQRERFYSDAQYT RLKDSYLLDKEKMERARKDMIVLHPLPRVNEIAKEVDDDPRAVYFKQAKFGMYVRMALII KLLEANND >gi|229269866|gb|GG666045.1| GENE 123 128134 - 128562 585 142 aa, chain + ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 138 1 138 146 122 46.0 1e-28 MIEITSIKDGIVIDHIRAGLGMQIYNLLDLKDLKDEVAIILNASSTRFGKKDILKIANNI DINLDAVSIIDPTATVNIIENEKVVKKLELKLPEKAIDILTCQNPKCVSTTEREVQSEFI LINKEEKTYKCAFCGHIYDVEE >gi|229269866|gb|GG666045.1| GENE 124 128565 - 129758 1194 397 aa, chain + ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 20 395 23 422 422 243 37.0 6e-64 MKQIFTKFYGFDDVKISKNDLYVEDGIIVEKFSKEEADEIIDCNNLALMPSFTDMHVHFR DPGFTYKEDLETGSYAALKGGFTNVLLMGNTKPTVSSPEIYEDIMKRGKDIDLIGIDQVY TITKNFDGKTLDHLDTLPESVKFISDDGHGVDDDAIMYLAMVKAKKLGVNMTLHEEVAKV SAIDYEVAEDAMTLRDCYYAYKLDMPVHFSHVSTKGAMTAIKYFKDLGAKITCEVTPHHL YFSEKTRDEMKVNPPIRREEDRQFLLKMIKEGYVDAISTDHAPHSAEEKKNGAPGFIGIE TAFSTCYEVLVKSGIISLNQLVKIMSTRPSELLNIKKGKLEPGYMADFTLVDLDKSYEYK EEDILSKSKNSLMIGKTLYGSIERVYRGGELKYENNR >gi|229269866|gb|GG666045.1| GENE 125 129742 - 130605 1180 287 aa, chain + ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 3 283 2 284 286 281 52.0 1e-75 MKIIDKLYDRVEKLGFVCVGLDTSMDYIPDSMKDGKSIHDAIFAYNKEIIDATKDVCAIY KLQIAYYESYGLEGMLAYKNTLDYLRSLDLLTIGDVKRSDIAASATMYAKAHFEGDFEVD FMTLNPYMGMDSISPYLPYLESGKKGIFVLLRTSNPGANDFEVLKTKGEELFYTIGDKLK EVNDNYIGESGFGPVGLVVGATHSEEVEKIRKRYDKMFFLIPGFGAQAADSLNVYNLMIK LNAGVVNSSRAILKNWMNFEDGKTNVGKYAREKTIETYKEIAKNANL >gi|229269866|gb|GG666045.1| GENE 126 130592 - 131311 886 239 aa, chain + ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 2 232 3 237 246 175 42.0 8e-44 MQTYRPCKVLENIEIAPGILKISLGINLNAKPGQFFMLRADSFRQDPLLARPFGVCEQID GKLVFLVQVVGKGTRLIADLNEGDGVSILGPLGKGFEKTNDKKIAIVAGGIGIAPLLELA KNLDTKADFYAGFADEPYFVDEFTSYVNKVVTSSEKKEGKFILDKLNPDDYDLIYACGPN LMLKALCEKNTRAKIQISMEAHMGCGIGACLGCTIEDVNGDFIRVCKDGPVFAAERIFK >gi|229269866|gb|GG666045.1| GENE 127 131308 - 132207 1060 299 aa, chain + ## HITS:1 COG:CAC2650 KEGG:ns NR:ns ## COG: CAC2650 COG0167 # Protein_GI_number: 15895908 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Clostridium acetobutylicum # 4 299 3 298 298 335 59.0 8e-92 MSLKVNIGGVEFKNPVIAASGTFGFGEEFKDYIDLNKLGGISSKGLTIRKNLGNPGIRIY ETPAGIMNSIGLQNPGVDHFIENELVFMRKYDTVVIANLGGHSYDDYIQGAKKLDKADID MIELNISCPNLKEGGMAFGTDPHKAREVISLVRAETKHPLIVKLSPNVTHIGEFAKIAEE CGADAVSLVNTFNAMAVDIRKRKFVFNNKTAGLSGPAIKPIAIRMTYEVAKAVDIPVIAM GGIMNVEDCLEFMMVGANAVQVGTANFSKLETMIEIIDNLEKYCSDNNINDINDIVGIL >gi|229269866|gb|GG666045.1| GENE 128 132216 - 132794 685 192 aa, chain + ## HITS:1 COG:TM0331 KEGG:ns NR:ns ## COG: TM0331 COG0461 # Protein_GI_number: 15643099 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Thermotoga maritima # 6 191 4 187 187 176 48.0 3e-44 MEKTIELLKKSNALLEGHFILSSGKHSDKYVQCAKLIQNPKYCEEVAKIIADKVKQAGIK VDLCVGPAMGGIIIAYEVARALGVDAIFTERENNEMTLRRGFEIKEGQKVIIVEDVITTG KSSFETVDVIKAHGGDVVALTSIVNRSHEDEINGLPLISAVKIEVNAWDPDDLPEHLKDI PAVKPGSRKMKA >gi|229269866|gb|GG666045.1| GENE 129 132854 - 133570 738 238 aa, chain + ## HITS:1 COG:no KEGG:Apre_0787 NR:ns ## KEGG: Apre_0787 # Name: not_defined # Def: mannosyl-glycoproteinendo-beta-N-acetylglucosamidase # Organism: A.prevotii # Pathway: not_defined # 36 232 34 230 234 219 54.0 1e-55 MVYKKKWINNFIFLMLLILPFFALSNISFASEAKVNRRETLLLGLKQISEEAMNLKDMRD IRFDKLRKDLDEFTKKGSEKISDKNDFYPLNPTQFSCEELGWGLAGTNLLGLQKDFKDAS EEEGVNPILLMAMAKHETGNGTSELFLKKKNLFGFNAVDHDPYNLATDFTNERASIFTVA KHLKNEYLNEDGKFYNGISTNGIGKLYATDPDWSKKVDWMMIEVTRAMISSYEEYEQR >gi|229269866|gb|GG666045.1| GENE 130 133585 - 135240 1304 551 aa, chain + ## HITS:1 COG:BS_glgB KEGG:ns NR:ns ## COG: BS_glgB COG0296 # Protein_GI_number: 16080150 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Bacillus subtilis # 6 549 14 617 627 191 26.0 3e-48 MNTRDYLDGKSQDGFEFFGSHKRKSKDYIFRVLAPNAKNVYIAGDFNNWEKSSLRKYQTG VFSITFNQVNEGDRYEYLIEDVEGNFYKKLDPYSKKICLEEGLTVIDNSAYKFKYKKISQ KPKNIYQVHLGSLFRDKEDKKKVYEKLVNHIKDNNFTHVQIMPVSEYKNYKQMGYSSLGL FAFSERYGSLDDFKYFIDILHKNKLGIIVELDIAEFDPDFLGLDKFDGTNLYNYDYDNIK YNYYGSINFDPGKNFVKSYLLSLVNYYVKELRIDGIYFSSAENMIYWQGDKNRGVNNSWL ELIREINDLIRQNKSYSIAGINGVYEEFDLGFDLIFDSEFINIVEVFQRQPIERAIYQTY IRKLIQNGNSKKVLGFSYVDSYLNEANLAMKMFSDDKKISQLKTLFTFLMTLKSSKFIFM GDELADMRTFSIYNNFDVSEIINKSFNQYYKDLAKIFLNTKALCEDESSIKILDVDGYSI YAYERTYKNEKYLVVVNFTDIGYEINSPYNLEEIINTNNLKYEGTGNVNGKIIIGEEIRI EPFGSAIFKIK >gi|229269866|gb|GG666045.1| GENE 131 135278 - 135691 439 137 aa, chain - ## HITS:1 COG:lin1008 KEGG:ns NR:ns ## COG: lin1008 COG0517 # Protein_GI_number: 16800077 # Func_class: R General function prediction only # Function: FOG: CBS domain # Organism: Listeria innocua # 1 126 18 143 150 70 34.0 6e-13 MLPASQVAVVNENDSLLHASLVLSSSGYQIIPVIDDNNCIRGLISIPQIVKNFDNISIFN EEKLAAHTVKEAMNQVVPILFDNYELEDVISLLIDNNFVCVTMKNGYFLGIIPRKVVLER FTQVAHNIEREYKLIEK >gi|229269866|gb|GG666045.1| GENE 132 136295 - 137977 1487 560 aa, chain + ## HITS:1 COG:BH0034 KEGG:ns NR:ns ## COG: BH0034 COG2812 # Protein_GI_number: 15612597 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Bacillus halodurans # 3 403 4 415 564 284 38.0 3e-76 MTKALYRQYRPKVFEQVLGQDKVINVLKNQIKNKNFSHAYLFAGERGCGKTSAAKIFAKA INCLNPKDGSPCLECENCRAIEEETSLDVVEMDAASNRRIDDIRNLRDNVIYPPANLKYK VYIIDEAHMITREAFNALLKIMEEPPKHLVFILATTEIDKIPKTILSRVQKFEFNKIDSS KIKEQINIILKDQNVKMENEAIDLIITKAKGAMRDALSILDQVLSFNKKEFMLKDVEFIL GSVGFEKINKLVTSIIVKDQRQSLNDLLDIRNDGKSNLDIVDSLINFYRDLMVLKVSGDD MDFENQDRLNFLKEKVDEISLDRILTSLDVLNDYCIKINNSSNTDILSEVLVLRLIDTVD TNSLRSRVEKLERLDHSNIVDTINSIINVRLENFNPVTSKHDRTYDLEEIGPNKSDDVVD NHISNVGEIVTKTSIGNDISEDKESSKSISIDPHLMHDIREMVVSTSGTMLNTIFNDEGF NYEYNGSDFVLIIKDEFYRIFIETKIDEISEKLSAILNKDISFSLETRDSKEAENIERDS KQSQTIDKLKKIFDEELSIK >gi|229269866|gb|GG666045.1| GENE 133 137987 - 138322 183 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149916415|ref|ZP_01904934.1| 30S ribosomal protein S21 [Roseobacter sp. AzwK-3b] # 7 108 6 107 114 75 34 4e-12 MARNFRGGMPNMNNMMKQVKKMQEEMEKAQQELEEKEFTSSAGGGVVEATVTGKKVVTSI KINPDVVDPDDVEMLQDLIMVAINDAASQADKFNEDNMGRLTGGINIPGLM >gi|229269866|gb|GG666045.1| GENE 134 138322 - 138927 592 201 aa, chain + ## HITS:1 COG:slr1426 KEGG:ns NR:ns ## COG: slr1426 COG0353 # Protein_GI_number: 16332099 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Synechocystis # 8 199 42 232 232 196 46.0 2e-50 MAILPESLNNLIEQFQKLPTIGRKSAERLAMSIVDEDAKSVEDFSKSLIEVKKRIHHCKI CGNLTEEDTCNICKDFTRDDEYLCIVEDVRNLIAIEKSGAYRGKYHVLGGLISPSDDISP DKLNIDKLIKRLDTEDIKEIILAISSTIEGETTILFITNLLKGRNIKISKIAQGIPVGSH LEYFDQLTLERALEDRRDVSE >gi|229269866|gb|GG666045.1| GENE 135 138920 - 139921 674 333 aa, chain + ## HITS:1 COG:no KEGG:Apre_0793 NR:ns ## KEGG: Apre_0793 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 1 330 1 330 332 215 39.0 2e-54 MNKIKKLLLIIIPILLLSGCLLFKNKKSDKIDKIEKEVIEVNKKPILNKIDIKSATFASD IVLDELSKDSENTYETTKINNLTQIESLDFDIAIVPAYQVVDLYNKTDGNIKLAAITGVN NLHIISDKQINGPKDMAGKTIMVPELNDSMNRLIDTKLGFVKTLMRINTEFYYSQKELVK NLDSANNILAILSEPYYSKALAKKNYYSFDANKAISMLPNSKVDSNGDFLSEVIIVNKNF LMDNKKSVDKFLSDYKKAQQSIDSNTVLSQSIINNYDITNEEAIKIYKSMENTYIDSDTM SGVFEIYMDKLENLDSNIFSGKRPTDDLYYNIK >gi|229269866|gb|GG666045.1| GENE 136 139901 - 140125 102 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484862|ref|ZP_03915178.1| ## NR: gi|227484862|ref|ZP_03915178.1| hypothetical protein HMPREF0072_0265 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0265 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 119 100.0 1e-25 MKTRLQSPFISTNLNIGLKGVNLDLLKIANDKKRSDIYKNRNKIRNKLKWRRLASILICC YLIIGPKISLDIII >gi|229269866|gb|GG666045.1| GENE 137 140201 - 141334 535 377 aa, chain - ## HITS:1 COG:L55605 KEGG:ns NR:ns ## COG: L55605 COG0582 # Protein_GI_number: 15673415 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Lactococcus lactis # 1 375 1 357 359 207 35.0 3e-53 MNIKSYRDKNGELRYKFNAYLGTDDITGKEIRTNRSGFTSKKQAELAYANLRNENLRRKK NPTFKEIGERWLELYSKTVKYSSYQRTKSLFNTHIYPFIGNKLLKSITTAMLQELTNKKS KELASFSKINAQIKRVFDYAISRDIVDYNPALSVIYPITNVNSVDRYESIEFWEKDELKE FLTACKKDLDFMWFCYFWILSYTGMRKSELQALEWADIDFNRRTININKSLSVYKDNKKF ISSTKTKNSTRIITIDSITVKLLLDWKQQQSEIYKKTVIKGKTQKYVFTDKSLELTSHNA PRKRFLRVLKNNNLRKIRLHSLRHTHASLCFEAGMDIKDVQHRLGHSNIETTLNIYVHIS KIKERKSISKFEDFMSD >gi|229269866|gb|GG666045.1| GENE 138 141514 - 141861 327 115 aa, chain - ## HITS:1 COG:no KEGG:Smon_0909 NR:ns ## KEGG: Smon_0909 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.moniliformis # Pathway: not_defined # 1 115 1 114 115 95 49.0 8e-19 MKDRIKKIRKTLGLSGEKFGENIGLKRSSISQLETGTNNPTDQVIKSICLAYNVNENWLR TGNGEMFIETKDSFLDSISKQFNLEELDVKILESYIDLPPEKRQVIKDYLKSLNK >gi|229269866|gb|GG666045.1| GENE 139 141994 - 142167 183 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484865|ref|ZP_03915181.1| ## NR: gi|227484865|ref|ZP_03915181.1| hypothetical protein HMPREF0072_0268 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0268 [Anaerococcus lactolyticus ATCC 51172] # 1 57 1 57 57 75 100.0 1e-12 MIIEINKTLTESERKDVYEIVNLLVNLDEEVKKKLLYMMLGMELLGASGEEKTKEYA >gi|229269866|gb|GG666045.1| GENE 140 142283 - 142516 238 77 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484866|ref|ZP_03915182.1| ## NR: gi|227484866|ref|ZP_03915182.1| hypothetical protein HMPREF0072_0269 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0269 [Anaerococcus lactolyticus ATCC 51172] # 1 77 1 77 77 130 100.0 3e-29 MSKEEFLENIRKIISNNQEVYGIKNDDNLKAISVVLGINFKRWSDEEIYTYLKGMYDMIN ILNNPWNYFVGGKYEEI >gi|229269866|gb|GG666045.1| GENE 141 142643 - 142993 483 116 aa, chain - ## HITS:1 COG:no KEGG:Smon_0909 NR:ns ## KEGG: Smon_0909 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.moniliformis # Pathway: not_defined # 1 112 1 112 115 119 58.0 4e-26 MSNRLKQLRTTLKLSGAKFAEPLGVSRSAISDIERGRNNLSEQMIKLICTTYKVNENWLR LGEGDMFIASDKIPLDDLTKDADPLELAILKAYFSLDKDLRSKALQHFKDQLIDKE >gi|229269866|gb|GG666045.1| GENE 142 143132 - 143281 159 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAQVIIVLNKDELEEFKELCKYIKVLKIRNKEKLLGFLKAVEFTEEINK >gi|229269866|gb|GG666045.1| GENE 143 143407 - 143622 186 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484870|ref|ZP_03915186.1| ## NR: gi|227484870|ref|ZP_03915186.1| hypothetical protein HMPREF0072_0273 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0273 [Anaerococcus lactolyticus ATCC 51172] # 1 71 7 77 77 122 100.0 8e-27 MLKCKKCGNTKEFYLKEKFSGETEIVIDNHGEQLDCNCDIYDSATYKLKSIYYFCRKCDA KVAKIPEDKRY >gi|229269866|gb|GG666045.1| GENE 144 143631 - 143930 290 99 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484871|ref|ZP_03915187.1| ## NR: gi|227484871|ref|ZP_03915187.1| hypothetical protein HMPREF0072_0274 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0274 [Anaerococcus lactolyticus ATCC 51172] # 1 99 1 99 99 190 100.0 3e-47 MKISDAVIGMIENNKFVSFFEDDEIIIIPRLDHDFCHEVLKYANKKESKGTGWHRRELEC NRVSQALENDNRFEKFIHITGRKAYRYLGNCRGNHGNKK >gi|229269866|gb|GG666045.1| GENE 145 143914 - 144123 95 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484872|ref|ZP_03915188.1| ## NR: gi|227484872|ref|ZP_03915188.1| hypothetical protein HMPREF0072_0275 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0275 [Anaerococcus lactolyticus ATCC 51172] # 1 69 1 69 69 127 100.0 2e-28 MEIKNKIPRVKKDIEKDFLKLSELREYLGCGNETIYKMCENGLPRYQPYGNTILYYKQDV IDFILKHEL >gi|229269866|gb|GG666045.1| GENE 146 144139 - 145092 590 317 aa, chain + ## HITS:1 COG:no KEGG:Amet_3992 NR:ns ## KEGG: Amet_3992 # Name: not_defined # Def: replication initiator A domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 2 188 6 193 319 179 53.0 2e-43 MFDYYYREEAEQFSFIRIPKQLFTDPEFSDLSTDAKLVYGLLLDRMSLSRKNDWFDEDNR VFIVFSIEDIANTLNYSKNKSVKILQELDTEIGVGLIEKKRLGLGKPNIIYVKNFIKSEN IVGEISKNSLEMLKSSRIPKNQIQEYQNIKFKNTKKSNSRIPKYQIQEYQKMVSNNTNIN KTDYNKTNNMGDDDEEETKNLQQFIDCWNGLPDEINKILACNQSRIDNINNLINKFGIEL VCKAINSISVTDFLLGKKTTWKINIDWFCDEDNFVKVLEGYYQDQTKSKNDCSRNTKSIT DIARARRLKRLAESTNN >gi|229269866|gb|GG666045.1| GENE 147 145104 - 145364 253 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484874|ref|ZP_03915190.1| ## NR: gi|227484874|ref|ZP_03915190.1| hypothetical protein HMPREF0072_0277 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0277 [Anaerococcus lactolyticus ATCC 51172] # 18 86 1 69 69 110 100.0 4e-23 MLNLTYEDISECILITNMIVDFKITNFKDLIIYCIDEFEKDFNKNSHNTPMIETVIKNPE YFKIFIDSNNKKLSANLIGHNMVQNV >gi|229269866|gb|GG666045.1| GENE 148 145477 - 146196 635 239 aa, chain + ## HITS:1 COG:no KEGG:Amet_0452 NR:ns ## KEGG: Amet_0452 # Name: not_defined # Def: heat shock protein DnaJ domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 147 238 165 256 256 79 41.0 9e-14 MIIFLMVLGIIFAILSVGVVFIPYFALLIFGMDFVVVFLLPGAINNYFGNKVVPDNFFLN LIIVIIYLGMTLYLLSKNKKVYFFVVSAIAFLMYAGGLQNKTLPIWIMTIMYLAFILSRL VVAFGFKMLSRRPVDKESDNESDDFYESSQGEYAHDKKSNNNIQNGISEFKDNFESACDM LNLSYNCSFTDVKDNYRVFAKQYHPDINKDDSSTRKLQKINEAYNFLTEDNIETYQKLK >gi|229269866|gb|GG666045.1| GENE 149 146209 - 147066 923 285 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484876|ref|ZP_03915192.1| ## NR: gi|227484876|ref|ZP_03915192.1| hypothetical protein HMPREF0072_0279 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0279 [Anaerococcus lactolyticus ATCC 51172] # 1 285 1 285 285 483 100.0 1e-135 MKKILRKLALAFVILVSITSVSAAEESKDSSHPELEEWQRYNDSLVRFGQQYQNESNYIG KINEVSELKVMPEEDIKKAERGNVKVNVKTFKPGTKVELVLGKQGTNYGLCLVCEGESFE QEIPVGNYSFIDARFVDSEGRRYLYSYVAKPVIFKVNKGETTEVDISMVGEKNMIYDPSI EQTKQEQIEAADAKKKADEETIAKGELTEEEQYLMASNLDFALANFDQLSEREKNYLREH ADEFGIKVPGAKGSGLVKVLKTLAFAAVIALAAIVGYKKYQEKNK >gi|229269866|gb|GG666045.1| GENE 150 147299 - 148045 597 248 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484877|ref|ZP_03915193.1| ## NR: gi|227484877|ref|ZP_03915193.1| hypothetical protein HMPREF0072_0280 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0280 [Anaerococcus lactolyticus ATCC 51172] # 1 248 1 248 248 396 100.0 1e-109 MTVNASADSQIMVKEIKNKAEIAELAKNKKNNGSWYVLSKDGETKYFYITDKGEVEIHDK DPNQQASDEYGNLEKGNVNIKVGGQIGYQSLIVNLKTKTGEHLPIDLNGAEIKAVIPLGE YEIDSVSIVDKNGYMKDTKYDVDKQYFKVEKGKDYNLDIKITGLVDIENKSIDDLVGEEE TNKKKELKANNQRTSDYNELRNTEKDKKANKSKYSNFKYITTGVTLLILSVISFLSLRKR KIKGDYDD >gi|229269866|gb|GG666045.1| GENE 151 148038 - 149039 980 333 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484878|ref|ZP_03915194.1| ## NR: gi|227484878|ref|ZP_03915194.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 333 2 334 334 468 100.0 1e-130 MIREYLDRFLYHIEQPCDIPFINKRIRFKYVYTIILILFMLLVIIFSVKSSLDASRQEKI DKEFAIAEAMNKKEEQKEDSIEEPEETNLNDYENRDKIKEDNLNAVDLNKLTEEERKKRS AGLEDNDFIKNKNNEINDEEITNNSNRNQQELKKRYEEQTRAIEVNNNSDNNRIIPANYG NSDTFNAEYKENMEFKSRLDKLEKEVNNLGVDADKEKIESKQKELEDLTKEIKNQKEIIE KLGQSIESFKSKEQSYKMLVLSSKNILLLNDKDSYLVTKTDENIDLITYIKLVSDFLDDK IKQDQSKFKIEKIDESDCKDVIYKLDKAGVDLW >gi|229269866|gb|GG666045.1| GENE 152 149033 - 149341 397 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484879|ref|ZP_03915195.1| ## NR: gi|227484879|ref|ZP_03915195.1| hypothetical protein HMPREF0072_0282 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0282 [Anaerococcus lactolyticus ATCC 51172] # 1 102 1 102 102 112 100.0 7e-24 MVKSNVLSAKELENLEAKELKALENLEKKREDLSKKEAALSKAKESLKKAEVDYDIASAN KMLGLMSVFTEEQRLDIVESAKLQIHSNEGVTNDEDKETPQS >gi|229269866|gb|GG666045.1| GENE 153 149310 - 150527 1074 405 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484880|ref|ZP_03915196.1| ## NR: gi|227484880|ref|ZP_03915196.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 405 1 405 405 663 100.0 0 MMKIKKLLKVSLLFTISALLLTGCKTSKQKEIRELSNYVDLSYEGANGSASTVVSFNKDK AYKSINSILKLKNDDEAEISKLNKLLDGFKIDVLNDNKKLKNGDVLKIEMEADDNLLKYF RLDLNKKQSVTVAGLKEPVEYDLFDGIDIEYKGYSPNLKVEIKKKDSQNKFASSINYNVL NPPPYYKGQTLKVKARYDKELARKAGYVIKDTVKNIDVPKELGYYVENLSEISSSFIYDK YYEGYDLINKERENIKNFIVSNLGKNSKLKDELSDPKIYIDSDIKIKPEDAFFSVSKGNL KTKELEKIGNKLTFIYRVEVTNKNYNFPIFYVTYEVESITKEKDGTFTKITGKLSSYDKY YDNILIGLANSIDRSYQTYRVENLEDMLKTEEGNNIENRGNTNDE >gi|229269866|gb|GG666045.1| GENE 154 150517 - 150774 332 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484881|ref|ZP_03915197.1| ## NR: gi|227484881|ref|ZP_03915197.1| hypothetical protein HMPREF0072_0284 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0284 [Anaerococcus lactolyticus ATCC 51172] # 1 85 1 85 85 145 100.0 1e-33 MMNDYLKEKGEAYDRKIRARLRTKVKESDVPIQTIAESIGKSPPSVYRYLSLKNKSRLPI EIIVKILAAIGVNEAEFFKEVDEMD >gi|229269866|gb|GG666045.1| GENE 155 150905 - 152767 2682 620 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484882|ref|ZP_03915198.1| ## NR: gi|227484882|ref|ZP_03915198.1| viral A family inclusion protein [Anaerococcus lactolyticus ATCC 51172] viral A family inclusion protein [Anaerococcus lactolyticus ATCC 51172] # 1 617 22 638 638 671 100.0 0 MKQNNTVKKVLISALVVGAVLGTGKKAEASTWRANSIATIQQAIGQDKAKYGENVYDIRW GDYLYGISQATGVNIDTLANINKIANKNLIFTGNKLYYGGNTLVTKDKNGNITAYRQGQN GSVQAVIPNQLTNREQRDIAKNHPSLQGQGGIKNLSDANKGLIAENNEKLKELEAKVAEY KKQRQAAQKTGEDLKASLEKYKGELSKIKDPVKRAEIEKKIKEIEALINSETQKGTDLDK KLEDQNKEIEKLTKENEELRKEIKENKEKDKDKTNNDTTGSIFDTSYWFRYGGGSSSGKT SDSDKKIKELENDAKEKQTEQEKLKKVIEDLKKKIKDNSDRIAELEKNKNGSGKGSDKEI AENKNKLKELKQEQEKNKASLEEVNKNLENSKNQLKEIDEKIKALEENKADKAELDNLKA EKEQLTNKIAELEKSLAAADQSNKDETDKIKKELDEARNKLGKVDEKIKGLEDDSNRKAE IEALKAQKDELAKKIAELEKSKTNLENKDKEIENKVKELEALINSETQKGTDLDKKLEDQ NKEIEKLRKENEELRKEIDKINKELGKLKKQADDAKDEALKKAKEAAIKELAAAGITDDA STGKINAASTVEEVERILAS >gi|229269866|gb|GG666045.1| GENE 156 153119 - 153364 266 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484883|ref|ZP_03915199.1| ## NR: gi|227484883|ref|ZP_03915199.1| hypothetical protein HMPREF0072_0286 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0286 [Anaerococcus lactolyticus ATCC 51172] # 1 81 68 148 148 134 100.0 2e-30 MEVGEVGYEKSVINEYSDTIYRYVKQSDGGMKCTGVGESQIVSSSQSKGKYNSSVESTNE FAYPKSGVKDGYWYEYIGLSK >gi|229269866|gb|GG666045.1| GENE 157 153387 - 155426 1892 679 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 665 5 700 709 389 36.0 1e-108 MKLIIAEKPSVAKSIANVLGCNQQQDGYIEGRSCIVTWTGGHLVTLDDPESYNPSCNHWN KADLPILPRPFKTKLISSKSHQYKVVKNLINDKRIESVVCATDAGREGELIFRLVYDKIG TKKTFTRMWIQSMEDPALLDEFNKAKDGHAYDNLSESAKARQEADWLVGINLTRLVSIEN NKKFTIGRVQTPTLNLINARCEEKENFKPQKYNTIQADISLDGKVITFETERIETQESNC KMSSMSSELEIEEVISEEKTTKAPKLYDLTNLQRAANKKFGLSAKQTLDIAQSLYEAKYI SYPRTDSEYITSDMVESVRQLIGSHVDSDMFDNVEKIANNKKVSDHTALLPTIYSIDKKD EINNLDKNHINIYTLIYMQLLKAVSKNYRYMQTKIKAISGDIDLYTVGKVDIDQGFKKLE SKDNAAKSEKDLSGLEEGMSYPITDTRLMDKTTKPPAYYNDDSLLKAMKTAGSGLYEKGL EIERTGLGTTATRADIIEGLIKNGYIERSKKDIVITELGKQLLSVAPEKLKEVELTVNWE NELAKISEGEKDKNSFILKIENYLKEIVKSYEGDESMKVEETIIGTCPYCQGNVYINDRS INCENSKHGKNKGNCRLSTLRIISGHKLDEDEAKSLIENGKTPLITDFKSKKGNKFSAYV ILASNGAYPTTLEFPDKKS >gi|229269866|gb|GG666045.1| GENE 158 155438 - 156553 947 371 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484885|ref|ZP_03915201.1| ## NR: gi|227484885|ref|ZP_03915201.1| hypothetical protein HMPREF0072_0288 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0288 [Anaerococcus lactolyticus ATCC 51172] # 1 371 1 371 371 565 100.0 1e-159 MTDRVASQTSAMTQKLAEVLFRTFQDESLKMIRASKQKTADLIKESKLKKFGEYDLEKLN RLSGSYGLGNINLDKSYYGVFEEFAIKNKMPFAKTEDEKGNYNVYFSNKNKKEMAYFPKF VLNKNELNKDDIINHAKMGKSKEILVINNITEDEMKIINLLKESNNLKYAKVDNRLVISK DDYKKFLDEYREVKAILKGKDGKDLIESLNNKKMLNEVIKYKDKKDIEQNRNYIIVDAAN PNKTIDLYKEKQKYLTNKDNLTEDEINKILKQSWYMTTPVIMTDIEYTNLLRMNPGEQIE LLNTKAKYIFIEEIRDELNPEQISEIDININIKEEQLSNSKTFSAKDFDIILNSKDDSKD ISTEISKDRSR >gi|229269866|gb|GG666045.1| GENE 159 156550 - 158589 1332 679 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 194 612 152 561 591 229 35.0 1e-59 MTKRKDYDGVPVYRETPGDRKRIIKYFFIPTFVIYLFFLLHLSYVVNYINTSKGLNAINE AFENITNSPFNIYFDPGIVFKGLIVYILVFAFSTMYFLSKPYKYRAKVGDEQGSAKWNDN IKKYNKHYSFPKGETYSEITYKIDDKEELAKDWKIKPIEKKYEDSKNKNLQQEGYVISPN MILSKNVNLSMRGKETFRNNNIIVIGGSGTGKSRYFAKPNLLNANASYIVTDPSGELLQS HGKYLQSMGYDIKVFNLVDMDLSHTYNPFSYIRDENGVYQMISTFILNTTPSGQSSSDPF WENAEKMLLTAICFLLYESYVDDDGNKIDGTFAEVTRLIGYAIPEKEGKETKLDLIFKEV EKANPESIALFNYRNFKQAAGDTAKSIVISAQARLFPFSLPKIKNLTSSNDINLETIGER KTALFAILPSADTTFNWIVSLMYSQLFETLYYKAEHRASKSLAIPVRFILDEFANIGKIP DFTNKLATMRKYDISCSVILQNLNQLEKMYEKDHKSLVGNCDTTVFLGSGEKDTMEYFSK ILGSTTIYKKSTGESLGRNKSYSRNEDVIKRELMTPDEIGVMDNELSIITIRGERPFKDE KFPYEKHPMYKYCGDGGGQELFLNPEVIKEMAKAYEINKELPSNNDEEIKKIDEQLSDYK TIKDWSNEDINIVDYILFS >gi|229269866|gb|GG666045.1| GENE 160 158606 - 158977 390 123 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484887|ref|ZP_03915203.1| ## NR: gi|227484887|ref|ZP_03915203.1| hypothetical protein HMPREF0072_0290 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0290 [Anaerococcus lactolyticus ATCC 51172] # 1 123 20 142 142 209 100.0 7e-53 MKNKLIQLQDKIENNKISLKIKRKIVAFLSPMLVILSPYIAYADISGVNMDVDENTAFAG MINVVIKIAKYVGISLVIVGIITFLEAQHSENPERKTTSIKLFVTGVCLVGIEYLLKATG LVH >gi|229269866|gb|GG666045.1| GENE 161 158991 - 159983 876 330 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484888|ref|ZP_03915204.1| ## NR: gi|227484888|ref|ZP_03915204.1| hypothetical protein HMPREF0072_0291 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0291 [Anaerococcus lactolyticus ATCC 51172] # 1 330 1 330 330 572 100.0 1e-161 MTASFLYKLWRLCFLDVTDIARTLLGINPLEGGFELRYGAGSNGEVVGTDIASLYNNYFV PMALSFLITVVVIILLQKIAFEGITKEAGIKVMIGFLISLMVITNGLKIGRNAIKLGNAA ALKIYDSSSILTGEAVNSDKTDEATGTEGDQSLNNLNNFLKTIDPELEIAKDGEGYKYKS NGGGFGGYLFSMAYKLVPSMFAGLLILFFVLGNFVCIGVMGSVLITRMLELILKVLGIPI AALEFALNGYNSSSMRYLKSLIAVSIQGVFIVLILWLKARMSLILIKIIGESTRGVYGGM IFIVLTLAVTAAFTGMLIKSQQYAREVVGV >gi|229269866|gb|GG666045.1| GENE 162 159984 - 160472 376 162 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484889|ref|ZP_03915205.1| ## NR: gi|227484889|ref|ZP_03915205.1| hypothetical protein HMPREF0072_0292 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0292 [Anaerococcus lactolyticus ATCC 51172] # 1 162 1 162 162 230 100.0 2e-59 MKDIKIPKEVSEYEAKLIGSLTARQAASLSVGTVTMFLAYIFLRDYFYAPIIIIVCSIIL IPFIGFAWLKPYGVKIEKIAKLIVTSRLRSSKRGYKISNSTLRTIKSIFITNSKKQKSKK TKKDRYDENEANILSKKVENNLNKLKKKQEKQFSKEYKGVRK >gi|229269866|gb|GG666045.1| GENE 163 160478 - 163864 2478 1128 aa, chain + ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 516 1079 19 596 617 82 21.0 4e-15 MSKKSIFLTSKSSRRKLKPFTLLDKGISVDKKVIKFFDINEIKNDKLIELIKSSEKVSIT VSTNKKDGKYFNKNILRTEGDTDLDLLSYEDADIMEFISSIYNNDDRLNEVYNNKITNVY DEIDVIAPDRLIENDSYIEIDNQYIRAYTIINPIIDIDEIKQFMDSNIEKIYTVFFEKLK VDDLKANLEKYYSMEINKLEKYGARSEILNQIEQIENKRDKFLKELDENKGVIYTKSAIL TIKSDSITSLEKDEDMIRKYLLNEGSIIRPLYTNNLLALNSQALGVSYINNKSVFSFDNE IDLNLRKYLSMNEFKKNFYKTKSRLSTQDTIFLDDFIKDGILHLGNGKYSKSFKIKSINF ETLDEEEQEKIILRYQEFLNSFTKEVEVYVTINNKKIYIDEFTKEILLKDKNDNKDYLRK EYNDMLLDKISKGINSIQRERYVTLSLEADSYKEAIEKFNIYTDLMKRSIKTIGSGDKNN SDLEVLTEEDRIEILFNLLNPEKGKYLKYYNIEKMRKEGLTVADIISPDFVDITPNYIKI NDYYVSFYFISELPNLLNPSFFAGINEEFNEQILTTVIYNPYEQKEAVKLISSQYLNYNA ELESLNKRSKLNNSLFIIPPKLEVAIEETKALLDDVTVRDQKLFKTNVVVGVYGKTKVEM DKNASLLKDYCDRKMVNLTIAKNMQEYALNSCLPIGQDMLPMKRSLTSEAGAVYMPFKTQ NILDPSGMYYGVNPANKDLILVNRKKFKNGNGFILGKPGGGKSFAAKNEILNTILTTDDD VIIVDPENEYKDLCLSLNGEYIPIEQSSPYHMNLFDIEENDKEDGGLEGSIKEKVGFITG CIGLMMERALTIEENAILDDCITQIYKSWFKYVSEQKQNQQEVNYKYFPTLTTLREKLAS LQGREKNEAYSLITALRMYTTGSLNMFDQLSNINPKNRLAVFSIRGLNNEGVLKKLAMNI IMDQLWQRLLRNGKNGRPTWIYIDEIYLLFDNANSMNFLRNLWKRARKYNGFPTGITQNV DDLLAIHDARTMLSNADFVMMLTQSSIDKLGLANLYNLGETLQTYITDSEPGHGLIHTEF GTIPFENKFPKNTHMYEVMTTNPAEKAEIQRRKQNEIDRANKVKEASK >gi|229269866|gb|GG666045.1| GENE 164 163930 - 164991 622 353 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484891|ref|ZP_03915207.1| ## NR: gi|227484891|ref|ZP_03915207.1| hypothetical protein HMPREF0072_0294 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0294 [Anaerococcus lactolyticus ATCC 51172] # 1 353 1 353 353 588 100.0 1e-166 MTKNDKTTINGDDLRALIPFLACNSDYSFAVINSIYHEYKYDRGHKTSPLYIFTEKEFKN YITTKNRKPSNEKPYLTPIYDISSDQTVWFNLYTDKNFDAYKPNNPSQVREEIKIIFNSL VEFYNRHMIVVKFDTDEIYKDSYKYYNLEERELIFYDYKGLVEKIYVLLEVLLKSVFMTD NKILINLVFYEVLNRKVVLSIIDNEYSDISINQLQNIYEYSRIILEFINTLLADPGYIES GDPDENSVVDQRENINSIIFSDKDIIEVFSEIQDYKMNLLLNSIDEINILQSYKHWNLGD KNKYIASIKDIDSMKDLSNKLNSYSDEKVKAILLNNQYNLQIIRSKKNNVKQA >gi|229269866|gb|GG666045.1| GENE 165 164975 - 165547 523 190 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484892|ref|ZP_03915208.1| ## NR: gi|227484892|ref|ZP_03915208.1| hypothetical protein HMPREF0072_0295 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0295 [Anaerococcus lactolyticus ATCC 51172] # 1 190 1 190 190 322 100.0 6e-87 MSNKPDYINKEVEIDNDINSNIYKNQSEITKKDVIIAASGLTDSGELKSTVELYWDLDEQ GIKSNYKELEVTEAMLKINNISGFIQVELVFDKGEFQLNILHEFLSEYFSPNANTNRSLE VRIIPKSMEGEVMMIANDPIMMSVSSFNLNDLDTIQLLFEDSNVEIGYIGNKDINWEIET LPINFEKPII >gi|229269866|gb|GG666045.1| GENE 166 165559 - 166011 454 150 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484893|ref|ZP_03915209.1| ## NR: gi|227484893|ref|ZP_03915209.1| possible single-strand DNA binding protein [Anaerococcus lactolyticus ATCC 51172] possible single-strand DNA binding protein [Anaerococcus lactolyticus ATCC 51172] # 1 150 1 150 150 268 100.0 1e-70 MNLVILKGRLIQDPEMHELSNCELCVLKIGVMKDLSKEKIQEKIENGEYIYDIYTILVFN KYGQVLKDALKKGSNILVEGRLSKNKVEKNGKIYYNTSIVGKRITFLDKANDQTDLLERK EEFFEDDFQEVNPEEFGVVYNDSVNDSMPF >gi|229269866|gb|GG666045.1| GENE 167 166095 - 167258 759 387 aa, chain + ## HITS:1 COG:no KEGG:ELI_1911 NR:ns ## KEGG: ELI_1911 # Name: not_defined # Def: hypothetical protein # Organism: E.limosum # Pathway: not_defined # 3 372 9 384 416 287 42.0 7e-76 MKYTLYNKNIPVVDLDIDEHSLYVKNIGEIYNQEYKPFGIKEINKNEIYSWLSNRKIPAS RDNIEELLDSIDIATTNLLIFKAFALSLSDQYWLKPENQNIKWEDINFFDNDFSDDLGKF IFGNANEISSLKTPDNTSDGDLKKSWKIIDGKRFLIKAGRPPYNQEPFNEILASEICKRL KFDYVEYKAYKLNNKIYCGSENFIDKNTELVSAWDIYKDSQKPNHINKYQWYISLCKDLG IDVKKSIDDMIVLDYIVANEDRHFRNFGLIRNINDLKFIKPAPIFDTGYSMYCQQGDNMI GKVDKSKPFRDKHENQIKLVNLKNYDLSSLNDIGDYAYDLYSLNAHMEEISTKRANILAH TISNRVKKLEKIQELEVLQQKNKGRSR >gi|229269866|gb|GG666045.1| GENE 168 167255 - 168037 560 260 aa, chain + ## HITS:1 COG:MA2133 KEGG:ns NR:ns ## COG: MA2133 COG3177 # Protein_GI_number: 20090976 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Methanosarcina acetivorans str.C2A # 8 242 37 261 326 157 40.0 1e-38 MKKDYNSIKELNQYVAENIKILPKETYQSIVDDFDLRFTHESTKIEGNTLSIAEVKTLLV DKVSIGGKDLRELYEVTNNQKAYRLIKGRLEQGAALDEELIKDVHQVVMENIIEGGLYRS YNVRITGADFSPPDWTEVRTAMKWFMSDFETKKSDLNPIELASYVHAEFVRIHPFQDGNG RTARLLLNFMLMKAGYQPVIIEAKDRPIYYESLNDYAVTGSLENFYNLVLDKEKIILEDL KLEVYKVMKQQKIYRKQQKI >gi|229269866|gb|GG666045.1| GENE 169 168336 - 168701 306 121 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_1039 NR:ns ## KEGG: BLLJ_1039 # Name: not_defined # Def: endonuclease # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 118 247 364 368 170 60.0 2e-41 MKGLPWGLYYNEHKDRQDLDPGKLEKEIQRLMGDEDVSKKSGIYEYLLTGKEKLLNIRSF DRRDKLAAYERQGHKCAGCGKEFDFDELQGDHIVPWSKGGKTIAENCQMLCGDCNIKKSN H >gi|229269866|gb|GG666045.1| GENE 170 168869 - 169438 696 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484897|ref|ZP_03915213.1| ## NR: gi|227484897|ref|ZP_03915213.1| hypothetical protein HMPREF0072_0300 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0300 [Anaerococcus lactolyticus ATCC 51172] # 1 189 1 189 189 301 100.0 2e-80 MEERKFEKYQEEYEIRGMTKYRSDFLEERGEEICDELKYELENRDEEDYNICDVISDLST GYVDIMNEDLIDSIGDLYWDGFYEETMSQVGSQGDLINDIQMCQGDAYSYCLYNNLDTVV KNIVYDKLYDLGINVNEMIEYAPITEGVDERIKDIDNNLTIKELHQEIDDVISDLCKELE LEVDKERSR >gi|229269866|gb|GG666045.1| GENE 171 169522 - 170442 1141 306 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484898|ref|ZP_03915214.1| ## NR: gi|227484898|ref|ZP_03915214.1| hypothetical protein HMPREF0072_0301 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0301 [Anaerococcus lactolyticus ATCC 51172] # 1 306 1 306 306 453 100.0 1e-126 MSYYEVRANVNQLISENYEDYVKSLISIEKNINNEDCLNSIYNEFINDNNAASIFDADID GYIEKLGIDLEDERVIHGEPVSYEEEQEREVDREKFNKNDYENLKPDLDNASFTLYDYLL YDNQAYLSDAINEVADQSVDIYYSDLLKSLPDLENGGYYERAAEEFGLTGDLYKDIMTAQ YLRNIDELYENLDDIVKSVAISIAEDYELPLTEGIEEALNNISDCNKHDSIEPIIDELKD TIGYEAQDIAKEKLSREGIDINDDIEEYIEEITVYELDGNQNMMDLINDKIEEIKEDLEI NKDMSR >gi|229269866|gb|GG666045.1| GENE 172 170451 - 172331 1817 626 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484899|ref|ZP_03915215.1| ## NR: gi|227484899|ref|ZP_03915215.1| possible exonuclease SBCC [Anaerococcus lactolyticus ATCC 51172] possible exonuclease SBCC [Anaerococcus lactolyticus ATCC 51172] # 1 626 1 626 626 1031 100.0 0 MIDYNESLKLEKINESDLIGKYNHLSWVTPGSLVDILRQLKPSFRNEGKANDLRYLVYDL GDGYALIEGSVGDYRKQIPPLPLDIQSILDKSLEQEINKVFKNKNSDPKINELRIKFHAN LLVSELKKVMSKEFKSKEEFKDSKEYFDYLDTEYSKIDRDINENISVKKLTVQDIEDYFI DEYGNTREESYKSILNDYLDSKEIGVAYYESDNGVSIQSKFSLDTRELIQYINGVEIERE FAGDVFLSYTPSYDDLVRVDVSDKALKEIGLTYDSYNELTFIDENKVLLNSIIEEFENQV MLEADGKPNGGKSFNDETYKDFYEELELHFDIDKMTIQEFNKELSKCGLKLPQNIYEKYI ENKEDVEMTKDVKDLAIKFSNKDVHEYKTKDVFDNNKEIVKFRIKFPEESDYKNFSLDTK IAPRVNDDGLTSYMYISPEFEYRAIAPGLSKDGAIDWENKKEIKISGSDLQREFNKGKER LEKLSDEIKKNDVFIKFLNTSVNEYKVNDLYYDQGEHSKFRIRFPEESQYKDFSIDTKIK PIKNKDNQTSYIYIDKDYDYKIIAPGIDENKKLNWEDKSVIKVKGSELKFEFDKGLDRLN EISSQKVSDEKIENNVKEIGKDNRKR >gi|229269866|gb|GG666045.1| GENE 173 172373 - 173518 992 381 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484900|ref|ZP_03915216.1| ## NR: gi|227484900|ref|ZP_03915216.1| hypothetical protein HMPREF0072_0303 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0303 [Anaerococcus lactolyticus ATCC 51172] # 1 381 1 381 381 580 100.0 1e-164 MTRVSASVDKEIFEKMIGSIKRENAELRRSDDENKKRIEELKKIIDETKDKCEYLENLNS VYKQKIEELNNKAVSNNSDSLLEKIKSKTEISFIIDNKISDNNKFEEIFSNLISKENITP SDLRHFITEQEKYKNYIFNFSEDQIVKIFKKKVEAADTVLEMMNTEARGSVELAELMSLQ KVSQGLKYFDESVKQNLKICKSFVESDISNFKYVDLDTESYYDLFFNEFEKNPKILIYLN EEIKNNPEKFVYNDEDETKKISYERKINLKIFPYLILCLGDRVAEKYSLTEKVLIDHGEI IKYLPESLRNDERYILAALKSYPELILNVREDLRSDRRFLLEALKQNPKIKNIIQVDITE DELRKENNYKLSKSFLEKIFK >gi|229269866|gb|GG666045.1| GENE 174 173992 - 174285 318 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484901|ref|ZP_03915217.1| ## NR: gi|227484901|ref|ZP_03915217.1| hypothetical protein HMPREF0072_0304 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0304 [Anaerococcus lactolyticus ATCC 51172] # 1 97 8 104 104 149 100.0 7e-35 MYKRKTFMLDQNLSNKIRNVTKKTKNYTESDLINDAIKYYFENDKESLVVEKLDLIIYHL DNLDDGDTEIKNILQDCYKEMGKVIDILEERKNFNCQ >gi|229269866|gb|GG666045.1| GENE 175 174276 - 175913 1049 545 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484902|ref|ZP_03915218.1| ## NR: gi|227484902|ref|ZP_03915218.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 545 1 545 545 793 100.0 0 MPIVKLVSVVHDGSKRIAEKATSNLIEYNYDVQKRPPSGVVNLLDYADNKNKNFDNEEFI STINGLSKNKNIAKKQLMMTRANRLWEKNKHDPKPKKNSRFLYHFVVSFNKYDTEKFSWE QLHKFSEQVAKEICGSEYQSYLSSHLPSSDESNDYFHTHIVINAYSKKYKGNKLHIPEGY VEKLISKTNKLANVFGYSEVSEPEMINRMKKDKSWYEHKKYKNNDSWKEELKKDLYYVRN NSKDIYDYIEKVEKLGYKVRYKNSNTGKEYKTISYSPRKDQTEAKAVRGKTLGYEFTKIG LQEFFSLSLEERKEYEKKKIKDELSKIKNEEEKMRTLNDKIFNKIMYAGELRKIKKYDKN KNEKTKLEIDLELEANYLKEKEIESSNYIKDLYHTLNFVSMLKIKSYDELNEKIKEKDEL FEKLFKERNELKKTLEEYNLYLEYFDFAKQEGKLKYAESKSNITFEDLKTEKELLEKQII TLNKKIDNLKVYSKDLLKSKKFYDSKGTLHEHKAAQMSWIEREEKKVAKINVKKEILDKE QMNRG >gi|229269866|gb|GG666045.1| GENE 176 175917 - 178142 1475 741 aa, chain + ## HITS:1 COG:no KEGG:BLA_0575 NR:ns ## KEGG: BLA_0575 # Name: not_defined # Def: secreted protein # Organism: B.animalis_lactis # Pathway: not_defined # 641 741 233 319 319 110 52.0 3e-22 MIKVNKRYVNRNRVNKEKTKIEREIDDNNNFKTTEKNEKISNEDVKNKNEEKSFKKVENR YINKNKKNKETNNVEATAFKVDDNERKNYFDKGYYAGKYVDKKIKASAKGAIKFVNRELM NESRSDESLKIVQDYAYYGRMYGGLAKNIGVEAAVAGVNKIKTAPLITPKGFLKGDIRID TRSINQRLNDLSNKGFNRVFGLENSNIEFFKNNKYKNLKNIISTDSPGKKFTNKKIWNEY LKEKGLDKSNLRKYKLISKTKYNVSFAKLLYADKEFLLNNIERRNYAKTIRKFNKIKTRR IKIKNSSKQGIKDYGRKIIRDLKKDSNNLALSGLGESVDIHRNYYKAGKALIYKPGKNIT IKTSKQLIKGVKNRDKIKSSFKLIKSKSVKGYKSLAKTYGRYRRLYKSNGLGAVIKDISK NTIVRAFNLLKKLMIGIWQAMKAILAMMLGAGFFAMITIGLIMAVTIVLGNNRSMPLTDI QNESNVYQGEGVDLSKKNYGEDIKKHFDYIRELTKELDEKYRSEADIVNYLQNPDNAKAI LSLISVENDNDLSDKNKDKIYKAIDNYHEKSHKIDRVYFITHKVGETTVVLKCYDIKTDE LPSDIVKVANPYTRLDKESVSSGTSSSSNGSIHNHLSNPEASGSVKNDFDSVVKELRVSD VEKKHWEYIISKESGWNPSARNPSSGAYGLGQAYPPEKMKSYGEDWQTNPKTQLLWMHDY MINRYGSITKAYNYWIKNHWY >gi|229269866|gb|GG666045.1| GENE 177 178228 - 179055 952 275 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484904|ref|ZP_03915220.1| ## NR: gi|227484904|ref|ZP_03915220.1| hypothetical protein HMPREF0072_0307 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0307 [Anaerococcus lactolyticus ATCC 51172] # 1 275 7 281 281 532 100.0 1e-149 MKKSKIFMIASFIAITSIFNVTEIKADEQWTFEGWNGDTVSNAEDMFDNEWKFQYPILEG VEDQEPIPNQSDSSIPGANFSGIGMQDIANIVGGSGGMGYVNFNGKTYAYWNQGDFGGNI QRVGCGPTSLAILLSNLTGKSVNPRKVWDEAVRLGVTGTSYGSDGNGLARMLESYLGSQG YTVRRTLDYNEARRHLSNGGMALGNVGGRDYYSNPPRKIGSWFNFNAGHFVAYAGADSNG NVFTLDPGWRERTGLVDKGMVQSATKAYFLIEKKK >gi|229269866|gb|GG666045.1| GENE 178 179426 - 180043 312 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484905|ref|ZP_03915221.1| ## NR: gi|227484905|ref|ZP_03915221.1| hypothetical protein HMPREF0072_0308 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0308 [Anaerococcus lactolyticus ATCC 51172] # 1 205 1 205 205 377 100.0 1e-103 MKIGQAIKYRREELNYSLEYLANRIGKSIPTMYRYERSENPDVLSLDVFLEICEILKTTP DEILSDVDNYIRSNAKVFPSVIRVPLFSDDYILEAHNEDAEFYVPFDNPSEIPYKDITAY KIKNTTNFPNCFDKGDIIYICKVKEFEDKKNYIFLREADNKVQLIKARLLDEGNFLFIDE NNKVIELQHNNLKLIGKLLQISKSL >gi|229269866|gb|GG666045.1| GENE 179 180752 - 181885 1044 377 aa, chain + ## HITS:1 COG:CAC2237 KEGG:ns NR:ns ## COG: CAC2237 COG0448 # Protein_GI_number: 15895505 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 9 376 8 376 380 411 54.0 1e-114 MRNANNTAAMLLAGGQGSRLKALTREMAKPVVPFGGKYRIIDFALSNSTNSEIKDIGVLT QYKPQLLNEHLGIGAAWDYDRNFGGLRILTPYYTESGGRWFEGTASAIYENINYLDEVNP EYVLILSGDHIYKMDYRELLDVHKQKGADCTIAVMQVEWEEASRFGIMNTDDDDKIVEFE EKPANPKSNLASMGIYVFNWKVLRKELIEDYENKESTNDFGHDIIPKMLQQGSPLYVYKF DGYWKDVGTVRSFWQANLDLIDPDNELDIYDDNWKIYTKSLNLPPHRLGKNAILTDTLVN EACVIDGKVNHSVLFSEVEIEKGAEVYNSVLLNGVKVKSGAKIYNAVVAENMVLTEDIGK ENDDIVYLVSNEGIEEE >gi|229269866|gb|GG666045.1| GENE 180 181887 - 183014 1087 375 aa, chain + ## HITS:1 COG:CAC2238 KEGG:ns NR:ns ## COG: CAC2238 COG0448 # Protein_GI_number: 15895506 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Clostridium acetobutylicum # 8 366 8 365 372 194 34.0 3e-49 MDRIVALVYSPNFKETNYGPLCKFRPDFMLPFGGRYRIIDFALSNLANYDINRVILYAGS KLRSALDHIGNGKSWELNRRNGGLMINPVGLASKGSKSEIETYYDTIVYFQEHEFEYVYI KNPMYIIKEDIRDAMEKMKDEDIDCLILSSKVTDKDGEYLDQSIINSDDDGKPTGVGINM GITDTVDLFLGSLIMKKESFLKVLRHAMQENVSNSLLSAIFAYPGNLNIDFYRQDKEFEI IKDFTSFYEVNMRLLNQETFDNLFYEDGLVYTKSKDEPSTSYTKNANVKNSLIANGGIIE GEVENSIIFRGAKIGKGAIIRNSIIFQDSVIGDGAILNFVITDKGTEIGHDVRLFGNRAN PYVTSKNESLDQRSY >gi|229269866|gb|GG666045.1| GENE 181 183014 - 184444 1478 476 aa, chain + ## HITS:1 COG:CAC2239 KEGG:ns NR:ns ## COG: CAC2239 COG0297 # Protein_GI_number: 15895507 # Func_class: G Carbohydrate transport and metabolism # Function: Glycogen synthase # Organism: Clostridium acetobutylicum # 1 474 1 476 477 477 52.0 1e-134 MNILFLTSESVPFIKTGGLADVAGALPKELKKKGVDIRVVMPLHKGIGASYREKMEKITE FYVDLDWKHQYAGVYQLEWDGVIYYFIDNLEYFDRDGLYGYDDDAERYIFYSKVCTLLPK EINFKPDIIHSNDWHTAMVNVFVNDFRTGDSYYEDIRTLFTIHNLKYQGVFNSDYMALAG LDGRYFNENDLKYYDAINFMKGGIIHATHVNTVSENYAREIQYPFYGEGLDGVIREYNYK LDGIVNGIDYDVWNPATDKNLAKNYDLNSINDKYINKKELQKLYNLPQRDDVPVFGIVSR LNEMKGMDLVRYILEELLQEDIQLVVLGTGDYTYEEMFKYFEWKYPDKVAARIYYNEKES HEIYAGSDFYLMPSISEPCGISQLIAMRYGSLPIVREAGGLKDTVIPYNEYTGEGTGYSF ANINAHELLFTTKNAIDVYKNKNETHKHLVMNAMKQKNDWEMSSEKYLDLYEKIKA >gi|229269866|gb|GG666045.1| GENE 182 184450 - 186690 1754 746 aa, chain + ## HITS:1 COG:L99884 KEGG:ns NR:ns ## COG: L99884 COG0058 # Protein_GI_number: 15672682 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Lactococcus lactis # 1 744 1 785 800 301 27.0 4e-81 MNKDKEYIIKRIQSFLYSFYAKNTKNARVNEVYDCLCRYLMEVIGKTWVKSKDLENDKDY YILSFEYLPGKFIDRNIHRLKIKDQIIEALDELGFDFDEILACEKEADLGVGDIGIGSSA LINELANQKKRAVAYALRYENGNLKQKIVDGRQVEYSDFWLEQGSNWEHKKSFSYLLEID GRKSKTIAYDMPILSDNADFVNTLRLFKSEVVDAINIEDFTRGDFLKAYDNYINISSINK FLYIDDSTYEGKFLRLKQEYFYAVSAIRDIFRRHNKRHGNIKGIENNIKIFSHDIHPSLA LIEFIRILTREYGYEMSKAIDMSRMVFDHVAFSITDDSVEDYDIEMIRRINPEIKDAIIE IQKNLQIISPELSIIKNGKVSFRNINKYLSGDYNYLSKIIAEARENDINHSYFNYGTDRI LYSSSSNVGLSNLLRDYGINSFAYEKIEKIKKIQNNESFFKDLDKVKYNNKCRLAKIVEN SLGDVINPYSMYDIQLSIMHESKRQILNCLAIAYKYYMLKYNSNLKLTPTTYIFSGKANE GYFMAKETIKFIIALKKMIDKDKFIREKIKIVFVEDLNVEKIKRVLPAVDIYSNLTLPTL DNQNFHILNAIFNMSNIISTKGGIIDNLDVSNSFYTFGADFDTIQKLDIENSYNANEFYY NSEIVKFTIDNLLNESYDNFPYNFKIIYDQLLMYNDSFKIFYDLEDLVNTRSKIENEYLD IDKWTKRQVENIIWANNFRLDEVISK >gi|229269866|gb|GG666045.1| GENE 183 186692 - 188593 1714 633 aa, chain + ## HITS:1 COG:TM1845 KEGG:ns NR:ns ## COG: TM1845 COG1523 # Protein_GI_number: 15644588 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Thermotoga maritima # 18 551 224 768 843 410 42.0 1e-114 MNLVKKKNISYKELKKIKLGAIYSKDLTTFRVFAPDRDKIDLVITDNIKEVRRKTYPMSK DDMGIFSISLAGDYDGYFYNYIVEDKYEVTDPYAFSASINSMYSAIVNLEDTDPEGFRES KIPEIKENEAIIYELSVKNYTSDKSSGVFNRGKFLGLAETNTSYKGVRTGIDNIKDLGVT HVQILPMYDFISVDEDNSKFFCDDNYNWGYDPELYFAPEGSYSTDPTNPKSRIREAKQMV KAFHDKGIGVIMDVVYNHTFKTVDSNLNTLAPQYYHRTNPDHSFSNGSGCGNELASEKPF VRKLIIDSLIHWVKEYKIDGFRFDLMALIDLETIRIAIRELRKINPNIIIYGEPWMALSS PLSYDQQIWKGKQKSNGFGVFNDDFRDAIKGDVNSYGKGYIQGLFYNKHAIETGIRGSID YGNGDGFADDAAETINYFNCHDNLIIYDKLAISLDDTRNINSYIKLAMGIIMLSFGKPFI YEGNEFNHSKKNDSNSYNSPLSVNAIKWEHKKNNIEIFNYTKDLIELRKNIEAFKYTSKD EIENRLKFIEGLEDSLIGYILDNKYIVLINANGHDMFVSWNILDEYFKVNKDKKIVKVFD KEGINKISLEATDGLSLESLSVNVYKIGDTYGL >gi|229269866|gb|GG666045.1| GENE 184 188583 - 190277 1951 564 aa, chain + ## HITS:1 COG:SPy1503 KEGG:ns NR:ns ## COG: SPy1503 COG1109 # Protein_GI_number: 15675406 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Streptococcus pyogenes M1 GAS # 1 563 1 563 564 583 50.0 1e-166 MDYKKNFEIWYKDDRFDEETRKELEAIKNNEDEIKDRFYQSLKFGTAGLRGKLGAGTNRM NKYMVAQATQGFADAIAEGGEEAKKRGVAIAYDVRHKSLEFSKIAAEVFAANGIKVYIHK DIELTPVCSFTIRELGCVAGVMVTASHNPREYNGYKAYNEEGSQIMDQTANKILSYIGDH PDFFEIPRKDFEEGLKEGIIEYVPDEVIEKYMSLILDCSINDKGIDKDICVVYSPLNGTG NKLVRRILKERNFTNIHVVKEQENPDPDFTTVGYPNPEDPKAFKYSEELGKKVGADLLLA TDPDADRCAVEVRDRNGEYQFLTGNLIGTLLTQYILSGLDAKGELPKNPAVVKSIVTTDL IAPIAKKYGVKKYDVLTGFKNIYDKANELERNNSGKFVFGFEESIGYNYKDFVRDKDAVT AAMLITEMTAYYKSQGKTLLDVIEQIYKEHGYYSNEVVSIVLEGADGQARIGRIMTDVRE NPIKEINGEEVSKVIDYQNDETGLPKSNVLKCYFSDDSWVTLRPSGTEPKIKIYVNAISD SMDKALAKKNAIVKYMESLIDSIK >gi|229269866|gb|GG666045.1| GENE 185 190379 - 190882 333 167 aa, chain + ## HITS:1 COG:CAC0504 KEGG:ns NR:ns ## COG: CAC0504 COG1716 # Protein_GI_number: 15893795 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Clostridium acetobutylicum # 26 161 20 158 159 75 33.0 3e-14 MEKFFSVIDKIFSINVFGSLTLYQLLSTILKYIFVFVVFYFIYSIIRIIYYDVRTTLKKE QESDTYLKLININDGFSFMVQEYYFIGEDNTIGRDARNTISINDKYMSKFHARILQDENM YFLEDLKSANGTYLNDEKITDAIELKSGDIIRLGSLKFLFIQGDHDE >gi|229269866|gb|GG666045.1| GENE 186 190875 - 192140 849 421 aa, chain + ## HITS:1 COG:CAC0505 KEGG:ns NR:ns ## COG: CAC0505 COG0772 # Protein_GI_number: 15893796 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Clostridium acetobutylicum # 67 418 58 400 400 197 38.0 3e-50 MNRTFDKLEKSMIITRAKANLNLFLFEFLSLSLAMIFNIKNLTSMDFYTYLAILIVTLLT SFLVDRFTKSDNILLLIVNMLFSIGVAIIYRLDPKLGRRQLQIYIVGVILFFMTYFILKS YKKWDKFILFYAGISIALFIFTLIFGTNLYGAKNWIIVAHKFSIQPSEFIKVPLAFFIAS FYTNFNQISLKPFGRYFMNFMIYVFIGFLFLQKDLGTALIFFGVLILSQFVYEKDRKLIF INMFFMIIGSIVAYFLFGHVRIRVSTWLDPWSDIDATGYQITQALFATASGGLFGTGIGL GRPDYIPVAESDFIFSAICEEMGVFMGVGVVLLFMILVYRALKISLTQQNKFYSVLAFCI GILFALQTFIILGGVLKLIPLTGVTLPFISQGGSSMLSGFILLGCLQYCGEEIKEGGKSD R >gi|229269866|gb|GG666045.1| GENE 187 192130 - 193650 1327 506 aa, chain + ## HITS:1 COG:CAC0506 KEGG:ns NR:ns ## COG: CAC0506 COG0768 # Protein_GI_number: 15893797 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 50 479 11 460 482 277 36.0 3e-74 MTDNRENKKRITGKSFIDKIKELEEKQRYKENNQLKVLSKSTLNKRLVFVMIFFVCLFMF LTLYLVYFQLFKAKSLAENSHNRRLWLNEDLVKRGSIYDKNGNVLAFSKQDGSGKQVRIY NYPEASAPITGYSSTTYGKTGIEKSYNKELLAISGENFSQFRKMVVKKDTGNNLHLSVDQ NIQNIVYNYLSAHKGACVVMNPTTGQVLAMVSTPSFNPNSLDDDWNNLIQTDDGRLINRA CLGLYRPGSTFKIITSASILDNDINTSYNDKGSEIVQGYEIKNFEDQIFGSLNLRTAFIN SANTYFANKAVKLGRDKLAKTSENFAFNKDYEFDLDKNKSVIPFKDLNQADLAMTGFGYG KTQVTPLHMAMVTSAIANNGVMMKPRLVDKITNKENDVIFEAEDEILSKATSETTANAIR DLMVEVVRNGTGSAAYIDWVKLAGKTGTADKADGKVDAWFVGFAPADDPKIAFAIVIEDS QGTGGEVAAPLARRIVRDIFNTISFN >gi|229269866|gb|GG666045.1| GENE 188 193651 - 194436 591 261 aa, chain - ## HITS:1 COG:BH2848 KEGG:ns NR:ns ## COG: BH2848 COG0061 # Protein_GI_number: 15615411 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Bacillus halodurans # 15 261 13 262 265 119 31.0 5e-27 MTNIINIFKNKSRYTNTIFHKVKNILQSNGYQVSTHYNKNAFLNLVIGGDGTFLNAVHLT NFSPIPFIGINTGHLGFYQEIEVDMLDEFVAALSKKEYSIEELTVLESKINNKKINAINE VVVKSSKNQIIRLKVFIDGNFIEYYSGDGLIISTPHGSTAYNLSAKGAILHQSLNGYQLT PVAPVYSNLNKALKCPVVLPNDASVEISVSKRDNYHTVFIFDGKEFFTQDYKIKIGVSQN KINKLILNKNHYWTNIKNKLM >gi|229269866|gb|GG666045.1| GENE 189 194476 - 195318 200 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|238855152|ref|ZP_04645474.1| pseudouridine synthase, RluA family [Lactobacillus jensenii 269-3] # 32 255 37 264 287 81 27 4e-14 MNYIKFENFRKITLKKFLKEKSISIRAYQDLLNEGILVNDSSVHNNINLGKGDIVKIKID SEDLDYAPIEGELNIVYEDENIIVVNKPSGLTVNSKNQLSLANLLAYYFQKNDIKSKIRL INRLDMNTSGLMMVAKNRYAQAYYQKQIEENKTHKKYLAYVAGALNINELFKINLEYDEI SKTYRNSEKGRLAITYFKTLSCDDDYSLIECDIKTGKTHQIRASLRSMGHPIIGDKLYGS AYNFDRFLLHSFYLSFKEFVGQESIILENLPEFKPFLLKL >gi|229269866|gb|GG666045.1| GENE 190 195592 - 196200 928 202 aa, chain + ## HITS:1 COG:no KEGG:Apre_0879 NR:ns ## KEGG: Apre_0879 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 186 1 186 204 168 62.0 1e-40 MSLADYIESKAKAKQREIKYEIWKAKNHDSRMRGQGLLVGALVGAAAGILFAPKSGKQTR EDIKEAFNDTVETVRDTTYDVIDQAKDGYEDLKYRAYTDLQPIKDGLEYGAEVAKDTGRQ IKDASREVKESLAEGAKDVKEIVKESAGEISKVADEKKEEISKEAKETKEAVKDNAEDLK EEAKETKEKVKENDLKVRHKNN >gi|229269866|gb|GG666045.1| GENE 191 196215 - 196658 540 147 aa, chain + ## HITS:1 COG:no KEGG:Apre_0880 NR:ns ## KEGG: Apre_0880 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 147 2 146 147 124 66.0 1e-27 MSITIDFNLLGNIIISVLAILALIFLVLVLVKFNKLLNCLQEVLNKNSSNIDSIITKLPH LTNEASDLVTNLNSVVTDPNLKMAIAKVNDTMTSVNSIADDIKDTVNYVGITAVDSVDTF GAGVASITDYSSLIMDVIDIVKNVIAG >gi|229269866|gb|GG666045.1| GENE 192 196703 - 197707 1204 334 aa, chain + ## HITS:1 COG:BH3241 KEGG:ns NR:ns ## COG: BH3241 COG1609 # Protein_GI_number: 15615803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 5 331 4 332 333 192 34.0 8e-49 MGQPTIKDVAKLAGVSISTVSRVMNNSKPVSPEARRKVLDAINKLDFKPNELARSLVMRK SNLVGVIVKDIGIEYMAQLIRGIEEIGRVYKYDILLTSSYGEDQQVENSIDFLATKQVEG LVIITEDISTEILVKLRETRIPFVILDKYHNYKNIKTVKVDYESEEYKLINSLTKAGHEN ILLIAGKDQNVINESMIKGYENAVGKDKSYILRIDGMSSDEGYANAAEAIDLIKKANISA VACVNDEIAIGFMNYCVDHGIKVPDDLSVVGFGDNKIASIYRPKLTTVSIPYYDIGAISI RALIKRIKHEAEILEDDWIIDAQISKRESTKVIR >gi|229269866|gb|GG666045.1| GENE 193 197772 - 198032 486 86 aa, chain + ## HITS:1 COG:CAC1820 KEGG:ns NR:ns ## COG: CAC1820 COG1925 # Protein_GI_number: 15895096 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, HPr-related proteins # Organism: Clostridium acetobutylicum # 1 86 1 86 86 73 48.0 1e-13 MAERTVVVTNETGLHARPAASLVQFVKNYPGEVTIIKEDKEANAKSIFNVMSLGIAKGTE IKLIVEGDDEEKFADELVEFVENLAE >gi|229269866|gb|GG666045.1| GENE 194 198108 - 199814 1941 568 aa, chain + ## HITS:1 COG:BH3073 KEGG:ns NR:ns ## COG: BH3073 COG1080 # Protein_GI_number: 15615635 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Bacillus halodurans # 1 565 1 568 572 484 44.0 1e-136 MTKRYEGIKASTGYAIGKIYLFTREKIEVNQASISPDSADSEYQKVKDAINAYFDDLSNL DNPTEAQQNIANAHKELLQDPYFSDTIESKIKNENKNSELALDETIREMVEIMSALDDEY LKERASDYQDIGFQVMYKLKGIKPKDLSKLEKGSIIISKELTPSDTANMDKEAVVGFATD LGGKTSHTSIIAQTLDMPALVGMADVSTKLKGGEKAIIDGYEGILIINPSDDEVAKYEKL IAELKEKKERLKNIKDLQAVTTDGKHIEVSANIGNIEDLKLAIENGCDGVGLFRTEFLYM ESSEFPSEEVQFAVYKEATEMLGKKPLIIRTLDIGGDKGLDYFKFPVEENPFLGYRAIRL CLDKEDIFRTQLRALVRASAFGNLKIMIPFVVNIDELKKSIELIEEIKKDLDKEGIAYNK DLDVGIMVETSASIIMADKFIKYADFFSIGTNDLTQYTLAVDRGNENIAHMYSNYNPAVL RAIKHVIDVSHEAGKWTGMCGAFAADTEATKLLLGLGLDEFSGSSAKIAEIKDTIIKSSQ KEEKLFAEKAIDLELASEVEALVKEHNK >gi|229269866|gb|GG666045.1| GENE 195 199825 - 200718 951 297 aa, chain + ## HITS:1 COG:BH2734_1 KEGG:ns NR:ns ## COG: BH2734_1 COG3173 # Protein_GI_number: 15615297 # Func_class: R General function prediction only # Function: Predicted aminoglycoside phosphotransferase # Organism: Bacillus halodurans # 23 295 9 293 336 67 24.0 3e-11 MTSDIRNILGHTNIFNNQDKVNSIEKIGSSKYKVEKDDKYYVFSFYDLNQFDDFENEDLV NEVLAHAGLNPLTIYEKGIMPDIEKSYKVYEYRNEIALKDYLEKASDQDQEKVGTEFGLA LRKLHGIKAQDPVDWQKEFLIVSNKIFYMHGLNEIGDDDYILIDYINANKHLTENTAINL LYKNISDKNIRIYNENSLDLRGIKKLEYGDGIIDFVEINRIAITYPLFAKAALKAYHNGE KPARKFYRLLSLYQATTILESIINLRNKSDSTLTPEEVDGLLEMYDNFNRITPKWVD >gi|229269866|gb|GG666045.1| GENE 196 200886 - 201725 981 279 aa, chain + ## HITS:1 COG:CAC0496 KEGG:ns NR:ns ## COG: CAC0496 COG1284 # Protein_GI_number: 15893787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 273 5 276 279 169 34.0 4e-42 MKKYLWILIGSLLIAGGLYFFLLSHDIAAGGISGFALVVSEALPVLNLGMVNLVLNVVVL IAGMIFIGFEFAKKSLISSMAVSAYILVFEKMLPNVNLGNDKIINIIFGSIVVSLGLAIV FNHEASSGGTDLIAAIFNKYFNVPLHVCLFCADFIVVLLSAFIFGTELAMYATLAIMIQS IGFDYFMQGFGRKISIMVISDKYIDINEMLVNKHAKGVTLLEAEGGYSHKDKKVIMTITS IRTFPAIKDDILQIDDRAFIFTSTISEVLGEGFTFNQLN >gi|229269866|gb|GG666045.1| GENE 197 201829 - 202536 199 235 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|212640476|ref|YP_002316996.1| Uncharacterized protein conserved in bacteria containing two ribosomal protein S1-like RNA-binding domains [Anoxybacillus flavithermus WK1] # 1 227 37 272 285 81 28 5e-14 DLRQDDKVEAYLYRDLNEVLRASRDLPYKPGKVYSLKAVEITKKGVYFEIKGGHAFLPFE ERTYKIIKDMVYPLSFKEDDGYLYLTTKIRELLTNDHDYKENDEVKGRIYSINKSIGAFV VLDDKYDSLIRIKELKGVYIEGEEITARVKEVKNDGKIELTLRQRAYLEIDNDSDKILDY LYQNGGFADVSDNSSPEKIFSYFAMSKSAFKRAIGRLYKNKDIKIYKNRIELNER >gi|229269866|gb|GG666045.1| GENE 198 202539 - 203285 815 248 aa, chain + ## HITS:1 COG:CAC0279 KEGG:ns NR:ns ## COG: CAC0279 COG0760 # Protein_GI_number: 15893571 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Clostridium acetobutylicum # 5 245 3 245 247 133 36.0 3e-31 MDNNNKLLAEVNGKKIYRNDVISFMHNIEGGARFQNEEGIKVLADEMVNQEIILADAYKN KLDDEDEFKNELKLVKDNMLKNYAMHKIFEAVNPTDDDLKKYYEDNKELISPNKTYTASH ILVDDIDKANKIYEEIKLGLDFKEAAKKYSKDPSAASGGSLGTFPKGVMVKEFQDGLDSL EIGEISKPVKSQFGYHIIKLEDIQNEEPKAFDEVKEQVYQTYLMVKRQEKYLEKLKEISK NAEVKKYY >gi|229269866|gb|GG666045.1| GENE 199 203295 - 204683 879 462 aa, chain + ## HITS:1 COG:FN1277 KEGG:ns NR:ns ## COG: FN1277 COG2195 # Protein_GI_number: 19704612 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Fusobacterium nucleatum # 180 459 206 486 486 73 23.0 6e-13 MAHDYGNSNLKNYIDQIKSSLSASNKKPTIVGTIIKAAEESSCKIIKLGQTLYIKKGDNP LALFHLNIDNASDVPFSITDFEDENSIASKANFNLISSAIVINNLLLNSDKSFDVLISHS NIQSNIEDYSEVSAVLRTNNIINLNLRQADVIADEFSSLLLSLITVPVSRFKPEYPYKTY RLSLNNLMGGHAGDNINKVRKNSIKMIIGFFRKLKSKVDIEMLSFCGGDRYDNVPSSAEL EFIINPDYESDLLNAFEILKNDAIEKNLRYEPDMIFTCEEVENKELAPITGESFNQLASF VELCPSGPFTVSSIDDQVISSSNLATSRSLKRTINMILVFRSLTEEGMRQMLEKSSIAAD IANSKLEKKFFIPSWKNQDKSLTNVFSKAYKDLNDNDLEIIRTQYSLDSSLVFKNLNVKI VSLGVKYKQDDQYFYTQIDEISRVINLIEHVLEILKENKEKQ >gi|229269866|gb|GG666045.1| GENE 200 204680 - 205024 408 114 aa, chain + ## HITS:1 COG:no KEGG:Apre_0889 NR:ns ## KEGG: Apre_0889 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 111 1 111 118 102 54.0 4e-21 MTETFNIHGHEVVFNKNQGKAVIEIQLGETEEECILIDIFSVDDKEYIALLSGESSEIYL FRYTDIYGEDNIDLTMIDDEDEVDEVFHIFSHYWTDDMIDDLICEYEEEVNSEK >gi|229269866|gb|GG666045.1| GENE 201 205028 - 205978 710 316 aa, chain + ## HITS:1 COG:TM0515 KEGG:ns NR:ns ## COG: TM0515 COG1242 # Protein_GI_number: 15643281 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Thermotoga maritima # 5 280 3 275 303 230 44.0 3e-60 MTGVYYKVSDYYKDTYKEKVYKLPIKLPLTCPNRDGACGFGGCIYCSETGGSYENLDSSL SVEEQLSKNRDYITNRYKAKKFIAYFQNFSNTYMSLNDFKSYIKACDKDYIVGVSIATRS DCITEDKLKFLYDWKNITGIDITIELGLQTANYKTLKILNRGESLADFILACNLINKYDF RISTHVILALPWDDINDTIETARILNALNVKEVKIHSLFIAKNTKLAQMYNTGQIVLKTK EEYQKNVVEFLRHIDSRCAIARLVGRAPEEDTIFCNWDRSWWLIRDEIVSFMEENSIKQG DKNKQIIYEKIKGDKL >gi|229269866|gb|GG666045.1| GENE 202 205975 - 206403 580 142 aa, chain + ## HITS:1 COG:no KEGG:Apre_0891 NR:ns ## KEGG: Apre_0891 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 142 1 142 142 191 76.0 1e-47 MIYLVVGEQGTGKTKYLVEEANHEKELGNSNIVFVDTDDSQVRILDHKIRLINAKSYKIS NIEALIGFVSGILARDYDIGKIYIDGIYDEVNINEENIKDLIERLDSLSEYSKSDIYLGL DWRKEDVPQIGHAEIIELKLED >gi|229269866|gb|GG666045.1| GENE 203 206436 - 206981 303 181 aa, chain + ## HITS:1 COG:no KEGG:Apre_0892 NR:ns ## KEGG: Apre_0892 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 181 1 181 181 184 61.0 2e-45 MIIEKKKLDLFENWRLESIDLLSSGKINKDEFLDRNYKFLVELGLKPFSNIRQLEEGIYN YQYYNIMAKFANSKAFKYQNFPKKKKLYSKLINDRENFYYLKDIATEFIINLVGFDNIES YFINLNSKRLTGQIFEISVKSCDRLILHSKNKKLLSMLRDGNAFCEQVRESLIDSYVNRS Y >gi|229269866|gb|GG666045.1| GENE 204 206983 - 207969 753 328 aa, chain + ## HITS:1 COG:CAC1015 KEGG:ns NR:ns ## COG: CAC1015 COG0564 # Protein_GI_number: 15894302 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Clostridium acetobutylicum # 2 317 1 317 318 192 39.0 5e-49 MIEIVISKNQANQRFDRFLRKYFENAPLSVISKNIRKKNFKINDKRAKNNDFVNEGDIIK MYITDENYKKWLTKTDFKPVDFDLDIIYEDDNILIMDKKCGELTHAASNKDYGNNLVDKM NSYLYKTGSFDMSDRTFKPAVVNRLDRNTAGLIIGAKNSETLRILNDAIRENSIDKYYLT IVVGKVKNNFKIDTYISKNENKNKVKKCEEGKNILTYFKPLETNGKFSLLECKLITGRTH QIRYSLKENGTPIIGDRKYGIKSINEEIRNKFGINNQVLLSYKLVFPNLPGLEYLSGKEF LSKKYDDIIKLKEKIWKAEVNYGKSNRN >gi|229269866|gb|GG666045.1| GENE 205 207947 - 208846 391 299 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 296 7 317 323 155 31 3e-36 MAKVIGIDIGGTKINACLVDEKGNILERHMMDTEASKGRDVVLENIKKSIYTLSYKEASA IGIGTPGFIDSKNGIVTFAGNINGWTGLNLKEAIGEYLDIPVFVENDANIALVAEKWIGA CKDCDNVVMITLGTGLGGAIITKDGGLLSGAHFQGAELGHMMLHPGGNYCTCGQYGCAEA YCAGPAISEDYFRLTGKRLTGKEIFSLVDEDDKAKEVLENYQSNLAYFLTSLRNIFDPEA IVIGGGIINSKDIWWDGTIEKFKNYCNKPYNIDIRPAEFLNDAGVIGAAKIAFERMDNE >gi|229269866|gb|GG666045.1| GENE 206 208839 - 209534 648 231 aa, chain + ## HITS:1 COG:L0125 KEGG:ns NR:ns ## COG: L0125 COG0745 # Protein_GI_number: 15672379 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 4 228 3 226 233 191 42.0 9e-49 MNNKILILDDEDPIRQFMKINLDYQGYQTVEAASGEEALRIFDEEQPAVAILDIMLPGIS GFEVCEKIRTKSPMTGIIMVSAKSQDIDKILGLEKGADDYIIKPFNPQELILRVKSLMRR VNLNPTGSSNDDVKSLKDGPFTLDIYSKTFFKGDKEIDVTPTEFTILEYFIKNKGKAMTR DEIMKETWGDNYSNDTKIVDVNIRRIRAKIEENPAKPEFIETVWGTGYRWK >gi|229269866|gb|GG666045.1| GENE 207 209525 - 210991 1345 488 aa, chain + ## HITS:1 COG:ECs2886 KEGG:ns NR:ns ## COG: ECs2886 COG0642 # Protein_GI_number: 15832140 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Escherichia coli O157:H7 # 208 484 187 462 467 155 28.0 2e-37 MEIGKSLRKTTEKTKNLIESKSIKYTVVKIIMLFVLTTVIGFEIFAYNSIKNYYESSLIS SMKNQARISQLQYSSYMSRYDLQEVIIGDKNLFYRQNDSQVQILDNSGVVLFDSIASSQI GSNIDSKDVLDAKEGATGISKDTNSDSKEQILSISYPLKSSDQQVGILRLTSSLDRVNKQ INKDAFIYILFGIIISLLALLVSFVAAKSFIKPIKKLIGVSEVLAQGDYSIKADDSRGDE ISELASTINLLSENIVKREDMKNEFISSVSHELRTPLTSIKGWAITLQSDTIQKDPEMVS QGLKIIESEGDRLSMMVEDLLDFSRLSSSTFKYNKDKIDIVDLVQQVHTQLYPRCQSEGI KFSFTTFYKSLFVYADINRMKEVFINIIDNAIKFTDLGGHIDITIDLNDGDIEVSVKDDG EGIKEDEIAFVASKFYKGSSSKSQTGLGLSICEEIVKAHDGKLIIKSKYGMGTVVSVVIP RLEDEKNI >gi|229269866|gb|GG666045.1| GENE 208 210975 - 212459 1234 494 aa, chain + ## HITS:1 COG:no KEGG:Apre_0897 NR:ns ## KEGG: Apre_0897 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 494 1 499 501 473 54.0 1e-131 MKKIFKLIIIFTFAIIFSSCINANKDDLSDLIQTPKQDNPIIEGTWEVVEVKGNKQEEKT NNIKLGDKLYVNKNLVAINESYAFPPSFNSKYVKLSDYLKNRGIEISKDFKDRNVIVINA SQGQLFSRDLIITGDKYLFLIKDENIISLKKISDKVDAKVLDSYAKLASKERTTTDEGED IAEDLSLLLGVRERVDPESDNALYKYYTYLIRIEPDDTIKYQKAEDIFIKNQDEYWKVSL DLNNFTDLYDEIRAYPVKANEKENKDLILKNYTFKNIDLNMRLNFVSKDFISIDYTNNDN SNPIRKYALMETNNIAVNKFISLEEFTGEDQSDLIFKEKVKEEVNKNFSKTDMKDISFDN TNFGIVRNQGIWAFQSSISKGKGDEFVQNFFNVDIAIGDSILNPNNSSISRDQVYNINTQ FKDYLLLANKRYILIQTPDEILIHRIRDGIIEKSPVYAIATRVPSSIISIDQFLGSNATD VEKAFEKYNTVIEK >gi|229269866|gb|GG666045.1| GENE 209 212508 - 213104 292 198 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 2 183 3 188 197 117 38 9e-25 MQLVFASNNLNKLEQVKLLLDNDKVLMPKDVGIDNFDVIEDGSTLKENAFKKAYALYKLT KSKVFSDDTGLFVNSLNNRPGIYAHRYAGEDATDKDNRNKLLSELKDKDNRDAYFLTVIC FIDDDGKDYYFEGRLDGTIAEHELGDGGFGYDKIFYVDKLGKSLGQMDVLFKNQISHRGL AMKKFKEFLDKKYENSNN >gi|229269866|gb|GG666045.1| GENE 210 213085 - 213555 445 156 aa, chain + ## HITS:1 COG:BS_ysnB KEGG:ns NR:ns ## COG: BS_ysnB COG0622 # Protein_GI_number: 16079887 # Func_class: R General function prediction only # Function: Predicted phosphoesterase # Organism: Bacillus subtilis # 1 147 3 148 171 74 34.0 8e-14 MKILITSDTHGSYGQISDLILSHGDFDLMLHAGDGVEDCKYIKYETGIDYYVVKGNNDFL SNEPYNKIIEIGNHKILLTHGHKEHVDSSLNELIEKAKTNSCDIAIFGHIHRYMEIKSSG LLILNPGSPFLPRDGVGSAMIMTINEDINIEKVLLD >gi|229269866|gb|GG666045.1| GENE 211 213565 - 213975 311 136 aa, chain + ## HITS:1 COG:no KEGG:Apre_0900 NR:ns ## KEGG: Apre_0900 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 136 1 130 134 98 48.0 7e-20 MSGLINLISEYSSRLAILPILALMNVIITIIIHYINSKKILKYLPSLIIGVAALIIGFYS ISIFNTPMGLNTSWIAIFLGATSLVGICVGFIIDLMTSIKLNMKFNGNNKDDILENSSNG KNYFRARRKTKRKKND >gi|229269866|gb|GG666045.1| GENE 212 213968 - 214705 839 245 aa, chain + ## HITS:1 COG:CAC0263 KEGG:ns NR:ns ## COG: CAC0263 COG0560 # Protein_GI_number: 15893555 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Clostridium acetobutylicum # 3 241 4 242 247 196 44.0 2e-50 MTKAAFFDIDGTLFRNSLLIEHFLKLVDDGILERKIWTDEIGPLFSKYENRFGAYEDYLN KSALAYQKAMIGLDKEIVDKYAQIVLAENKDKVYNITRNAVNKHIEEGYLIFFISGSPDF LVNDFSKLYKATDSISTTYVFDENNKFTGKVIPMWDGESKLSAVSKLKEKYDIDLEKSFA YGDTNGDITMFQLVGNPHAINPSFELIENLYKDDELRSKAVINIERKDVNYNFALKDLSV EFLKF >gi|229269866|gb|GG666045.1| GENE 213 214890 - 215603 492 237 aa, chain + ## HITS:1 COG:no KEGG:Apre_0902 NR:ns ## KEGG: Apre_0902 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 237 1 237 237 258 62.0 2e-67 MKAELRKTIPVIEKLEYNYLVDKDIYSLNTLMSLLYDRNFINFSKHSYYTKDYCFKNLKK YFWNLVDIDEIINSLSRNIGSDIDRYEYLISIKAQFRAFKSKKAIDRLEFLMIEAFGVDF LLDSTNLFYNRDDKEILKIGNIMKEAIISDRELIACLRRDLYNFSDLVLKRKIYDIDILT HKQLTFNTQSIFTEDITSKQTQKIYEKTINYLYRSIVDTYAEYYYRGLIREVFERYQ >gi|229269866|gb|GG666045.1| GENE 214 215632 - 216126 579 164 aa, chain + ## HITS:1 COG:FN0214 KEGG:ns NR:ns ## COG: FN0214 COG0817 # Protein_GI_number: 19703559 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Fusobacterium nucleatum # 1 154 1 154 190 165 51.0 4e-41 MIVLGIDPGIAIMGYGVVEFKSNKVKVLENGVVTTSSKTRTPERLKILYDNLDKIIKEFK PDEFAIEELFFNQNVKTAITVGHARGVQVLCAQDNGLDIYEYTPLQIKQAITGYGRADKQ QMQLTITTLLNLKEIPKPDDAADALSVALCHVLSQRFKEQYRMN >gi|229269866|gb|GG666045.1| GENE 215 216126 - 216716 769 196 aa, chain + ## HITS:1 COG:ML0482 KEGG:ns NR:ns ## COG: ML0482 COG0632 # Protein_GI_number: 15827159 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Mycobacterium leprae # 1 191 1 189 203 108 32.0 5e-24 MISYIKGDVKAINEEGFIIETNNIGYYINSTLTSLSNIQINNEYKIYTSMQVREDDISLY GFYSKDELEMFLLLISVSSIGPKIAIGMLSSISADEIKLAIVNNDIDKLTDAKGIGKKTA SRIILELVDKVKKMAIPDLDKVEKVNPVKNNDIEVAREALKNLGYMENDVARVLNELKDT DLSLEGLIKESLKRLI >gi|229269866|gb|GG666045.1| GENE 216 216725 - 217732 1079 335 aa, chain + ## HITS:1 COG:CAC2284 KEGG:ns NR:ns ## COG: CAC2284 COG2255 # Protein_GI_number: 15895552 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Clostridium acetobutylicum # 15 333 11 329 349 396 63.0 1e-110 MFDENTRIVGSNEQIEDLRQENSIRPKWLRDYIGQDKVKEKLDIFIKSSLSREEPLDHVL LQGPPGLGKTTLSTIIANELGVNLRVTSGPAIEKPSDLASILTNLAEGDVLFIDEIHRIN RSVEEILYSAMEDFVLDIIVGKGPNAQSIRIDLEKFTLIGATTRAGMLSAPLRDRFGVLL SLNLYNSNDLTTIVKRSANILDIPIDDKGAIEIAKRSRGTPRIANRLLKRVRDYAIVKAD DKIDYETSRKGLELLEIDPMGLDTMDKKIILTMYENFAGGPVGVDTIAASTGIENVTIED VYEPYLLQIGFISRTPRGRVLTRKAYEHYGLKYEE >gi|229269866|gb|GG666045.1| GENE 217 217733 - 218755 995 340 aa, chain + ## HITS:1 COG:SP1416 KEGG:ns NR:ns ## COG: SP1416 COG0809 # Protein_GI_number: 15901270 # Func_class: J Translation, ribosomal structure and biogenesis # Function: S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) # Organism: Streptococcus pneumoniae TIGR4 # 1 339 1 341 342 426 59.0 1e-119 MRTSEFDYYLPEELIAQHPTSKRDEARMMVLDRKSGEREDKYFFEIIDYLKAGDVLVMND TRVIPARLFGHRPEKEEKIEVFLLNNTEGAKWEVLVRPGKKMKIGTEVIFSDDLSCKVVD VKDDGNRIVEFYYEGIFNEILDRLGNMPLPPYIKEKLKDNEDYQTVYSKNPGSVAAPTAG LHFTKELLEKIEEKGVKLAYLTLNVGLGTFRPVNEDEITNHKMHSEFYTLSEETSKILNE AKSEGRRIIAVGTTSIRTLESVYKKNNKICADSGWTDIFIYPGFEFKVVDAIITNFHLPK STLIMLIAAFTSKDIILDAYKDAVNKKYRFFSFGDCMFIK >gi|229269866|gb|GG666045.1| GENE 218 218764 - 219882 935 372 aa, chain + ## HITS:1 COG:SP2058 KEGG:ns NR:ns ## COG: SP2058 COG0343 # Protein_GI_number: 15901878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 2 372 5 373 380 512 64.0 1e-145 MPLKYELIKKDKYTNARVGVIHTASGDIPTPIFMPVGTVGTVKTMTVDDLKEMDAKIILG NTYHLYLKPGMDIMKKAGGLHKFMNWDRPILTDSGGFQVFSLADNRKISEEGVMFRSHID GSKHFFTPEKSIEIQNDIHSDIMMSFDECVDANASYDYVKNSMERTLRWAQRGLDYHKAN SHPDQSLFGIVQGGMFKDLREISARETVAMNFDGYSIGGLSVGETKEEMIDILNFTTPLL PEDKPRYNMGVGTPDYLFESFQAGIDMADCVLPTRIARNGTAITSHGRVVIKNATYKEDF SPLDPECDCYTCKNHSRAYLRHLVNAKEILGARLLSYHNLYFLLKMCENIREAIMNDSFL DYKKEFYEKYGY >gi|229269866|gb|GG666045.1| GENE 219 219882 - 220142 200 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484946|ref|ZP_03915262.1| ## NR: gi|227484946|ref|ZP_03915262.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 86 1 86 86 127 100.0 3e-28 MRLEYIILIILAVCFYFTNVNDYRKDKNREIFVNDNLKVSTKVITKSGIIGYVAKINKNE VILITGDVDNTSTITIEKSYIDNILE >gi|229269866|gb|GG666045.1| GENE 220 220208 - 221938 1672 576 aa, chain + ## HITS:1 COG:CAC2232 KEGG:ns NR:ns ## COG: CAC2232 COG0608 # Protein_GI_number: 15895500 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-specific exonuclease # Organism: Clostridium acetobutylicum # 1 576 1 587 587 431 42.0 1e-120 MANWFLYNKKQNYINNLKLGNITKLDALILGNRDIISPSKVDMYLNPSLSKLHDPFLLND MDKAVELIIDTMKNGGEIRIFGDYDQDGIASVMTLMDGLLFYYDNISYDIPHRVDEGYGI SSKMSDKAIEDKVSLVITCDNGITGFEQIDNLKNAGINVIVTDHHQIHKEENDEWLNQIL PNADAVINPKRLDSTYPFDDLCGAGVSFKLIQGLYQKLDGDDYYLYSLLEYVAMGTVCDI VSLTDENRIFVIEGLKRLNETEKIGLKALLDEAGWDKDVDEYTLGFILGPLMNSTGRLKS AKLAIDLLIEEDIDKIYDMASDLVKLNNERKSLTETAFNKIIELIKENSYDKDDVIVVYA PDINESICGIVAGRIKEKYYRPTIILTNAKEEGIAKGSGRSIPAYNMFEQISPYDDKLES FGGHPMACGLSIKIDEIDKFRIFLNRNSKLTSTDKEQSINIDTQIPISKLSLEFAESLDR FKPYGKDNSRPIFANKGVDIAAISMIGKDKNTLRLSLFQNGNYYNAIKFQAEDDYNYLKE KFDGDILGKKIDIVYYPDVNEFRGNRTLQLKLLDIR >gi|229269866|gb|GG666045.1| GENE 221 221943 - 224123 1853 726 aa, chain + ## HITS:1 COG:lin1558 KEGG:ns NR:ns ## COG: lin1558 COG0317 # Protein_GI_number: 16800626 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Listeria innocua # 24 724 24 736 738 634 44.0 0 MATDFNKEFIKFKELILKNNPHANIDLIKKAYDFGVLHHNGQKRNSGEDYFIHPIAVASN LSDMKLDDETICAGLMHDVLEDTDVTRDEMKAEFGEEITFLVDGVTKLKNINYTSKEEKQ AENIRKMVMAMANDVRVVLIKLADRLHNMRTLEYMTREKQLQKANETIEIYVPLAHRLGI YSLKWELEDLCFRYQEPEKYYELAEMVNVKRRERENYINEIIDTLTKALDSTNINFEISG RPKSLYSINKKMERNKIAFEEIYDLTAIRVLVDTIAECYAVLGKVHSLWRPIPNRIKDYI GQPKPNGYRSLHTTVFGDDSKPFEVQIRTRKMHRECEFGVAAHWRYKENKKTTSDFDDAM SFLRQIVEWQQEGGKDVNNEEFMETLKTDFFSREIYVYSPTGEVYSLPINSCSIDFAYKI HTEVGNSCVGAKVNGRMVPITQPLKTGDLVEIITSKNSQGPSRDWLNIVKSNQAKSKIKQ YFKRYDKEDNIEIGKSSVARDLKKYKQNYRYLLKDEWLAEIASDLGFPSEDEMYASVGYG KTTAEQVSQKLIRKDKEELKKKEISSPLDINKKEINTQVTNEIRVSDLDEDVEVKFAKCC TPVPGDPIIGFITKGNGISVHVKSCPNIINSKSPERLIDVYWQNLSTDKFPVKIQIISAN GPSILFEVSKMMSTFDVNILSINARTDSDSGIMDLVIEVSSTEQLDNVIKKLKTIKTVSD VFRVKS >gi|229269866|gb|GG666045.1| GENE 222 224123 - 224572 478 149 aa, chain + ## HITS:1 COG:TM0730 KEGG:ns NR:ns ## COG: TM0730 COG1490 # Protein_GI_number: 15643493 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Thermotoga maritima # 1 149 1 149 149 162 53.0 2e-40 MRAIIQKVKRASVKVENELISEIGNGYLVLLAVKQTDDDDDLAYIKKKISNLRIFEDEDG KLNLSIKDTGGEILLVSQFTLYGDARKGNRPSFTMSAGLEKANNYYERLSDELISEGFTV KTGKFQAHMEVSLINDGPVTIILDSERIF >gi|229269866|gb|GG666045.1| GENE 223 224572 - 225174 502 200 aa, chain + ## HITS:1 COG:CAC2272 KEGG:ns NR:ns ## COG: CAC2272 COG0491 # Protein_GI_number: 15895540 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Clostridium acetobutylicum # 1 199 1 199 199 135 40.0 5e-32 MIINRFTLGPVMTNSYLVHENGKGFIVDCPYPSSALDKFIEDNKIKIEFIILTHTHFDHV TGLKYYKDKFNVDVYASEDSKEVAENPNFNLAYHISNLEVPIDHYLKDGEVFSKYNIKAI KTPGHTIDSMSYILGDVIFTGDTLFRLSVGRTDFPGGSFDEIKDSIINKLGKLDRNSKIY PGHNEESILGFELDNNPFLH >gi|229269866|gb|GG666045.1| GENE 224 225186 - 226934 1833 582 aa, chain + ## HITS:1 COG:CAC2269 KEGG:ns NR:ns ## COG: CAC2269 COG0173 # Protein_GI_number: 15895537 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 3 581 8 589 595 622 52.0 1e-178 MEFKRTHMCGSLRSSDLGKEVVLMGWVAKKRNLGSLVFIDLRDKTGISQIVIRDDDKDNY EKAREISQEYVLEVKGKVFERESKNPDIPTGDIEIIADKINILDKAKTPPIYIKDDDDVS ENLRLKYRYLDMRKPSVQRNLKLRSDIVRTMREYFYENDFTEVETPFLTKPTPEGARDYL VPSRINAGKFYALPQSPQLLKQILMIGSLDRYFQVVKCFRDEDLRANRQPEFTQLDLEMS FSNQDDVIAMNEGLLKVLFDTYTDYDLKLPINRMDYSEAMESYGSDKPDLRYGYKIKDVS EIFVGSEFKVFADNTGDGRSVRAINFTGLEDKYSRKQLDKLTDFVKDYGLKGLSYIKFNN EMQSSIKKFLTDDVINGLKEKLDAKDGDLIFLAADKDKTVLEGLGALRVKIAKDNNLYEK EYALTWVVNFPMFEYSEEEDRYVAQHHPFTMPNEEDIDLLLTQPEKVRTQAYDIVINGDE MGGGSVRINNSDLQKKVFEALKLSDEDIKIKFGFFIEALQYGTPPHAGLAYGLDRLLMLF AKTDNIKDIIAFPKTQSATCPLTEAPTMVDDKALEDLNIKLR >gi|229269866|gb|GG666045.1| GENE 225 226943 - 227359 459 138 aa, chain + ## HITS:1 COG:no KEGG:Apre_0914 NR:ns ## KEGG: Apre_0914 # Name: not_defined # Def: positive regulator of sigma E, RseC/MucC # Organism: A.prevotii # Pathway: not_defined # 5 136 6 137 138 138 49.0 7e-32 MAMTKEGLVLENNNGNLKIKVDRNSACGSCAASASCAERKTTIIEVFSADNINKGDKVIL ESDADEISRISALVYIIPAILVMLGAILPSMLLKNTGYDTNLISLGSVILMLALSILYIK RLDKGSKKEKLIKVRKVY >gi|229269866|gb|GG666045.1| GENE 226 227393 - 228712 1177 439 aa, chain + ## HITS:1 COG:FN0170 KEGG:ns NR:ns ## COG: FN0170 COG1160 # Protein_GI_number: 19703515 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Fusobacterium nucleatum # 4 436 3 438 440 420 50.0 1e-117 MALPIVTLVGRTNVGKSTLFNRLVGKRKSITEDVSGVTRDRIVDKAEWQNNEFLLVDTGG IDISSKDMMNVEIRGQVEKALLETNLILFVVDGKEGVNPHDVDIANEIRKYNKPVIIVAN KVDNMQVPDDLYDFYSFGFDNLVMISAEQAKGLGDLLDAIISYIDFSQFEGNDDETRIAI IGKPNAGKSSLVNLLLNEDRMIVTDIAGTTRDAVDSYWTYNDHNYVLIDTAGLRRKSKVK ENIEYYANQRTFDAVDSAEICLFLIDATVGVTEQDAKIAGYAHNNKKAIIIAVNKWDLVE KDTNTMAEMEKEIRKTLSFALYAPIVFISVKDNDRIDTLLDMIEVVDNNYRMRIKTGVLN TILQDAMLINQPPQDKGKRLKIYYMSQVGTCPPKFLLSINDRELLHFSYTRYLENQIRQN YSLVGVPFSFVFKERSGKK >gi|229269866|gb|GG666045.1| GENE 227 228709 - 229287 487 192 aa, chain + ## HITS:1 COG:SA1187 KEGG:ns NR:ns ## COG: SA1187 COG0344 # Protein_GI_number: 15926933 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Staphylococcus aureus N315 # 1 191 1 199 202 109 37.0 3e-24 MKYLAIAILSYLLGSLPFGYYIGKYIYKKDIRSMGSGNIGTTNALRNFGKKAGLLTFVLD VFKGGLAAFLGNLIAGNDGMSLAMFFVVIGHMYSFLLNFKAGKGIATVFGALIYINPIFA LGMFGVFFIIVLLSRMVSLGSICVCLVAIISSLIMYRFNSFSLSLSIIAIIIITKHRDNI KRLIKGEENKLF >gi|229269866|gb|GG666045.1| GENE 228 229296 - 230279 1133 327 aa, chain + ## HITS:1 COG:SA1306 KEGG:ns NR:ns ## COG: SA1306 COG0240 # Protein_GI_number: 15927055 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Staphylococcus aureus N315 # 3 326 4 332 332 294 49.0 2e-79 MTISILGAGSWSTAIADLLAEKEDVLIYARDENVVFAINDKHQNIKYFPEIRLKENIRAT SNLSEVFANKYLINGIPTQQIRNVLNQARGLLKDDHIIINLSKGLELGSHKRISEIFKDF NKNISFVALSGPSHAEEVILKMPTAVVSACEDGALSKEIQELFVREYFRVYSSTDLVGVE LGGAIKNILAFGIGVAHGLGYGDNAKAALVTRGIHEMSRFACAFGAEFKTINGLAGVGDL IVTATSKHSRNNKAGILLGKGYSLEQIQNEINMVVEGIPTTKSVYELAKDKNIEIPITSE IYEVLFNNKDCDESVKDLMMRDIKSEF >gi|229269866|gb|GG666045.1| GENE 229 230343 - 230906 604 187 aa, chain + ## HITS:1 COG:lin2136 KEGG:ns NR:ns ## COG: lin2136 COG1799 # Protein_GI_number: 16801202 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 71 184 43 151 152 62 32.0 4e-10 MFDRFKEFIGIDDNYDDYDDDQMYYDDVEAKEEKRPRTTYSDLLDDGKDSTYATDSFKSS KTSFSDDYSFNNSYKSDDTEDKVVSINSSSFSRSSNMRISIQEPLDYDNDGPVVIEEILK NRVVVLNLEMVDNDLRMRIFDFVSGAVYALKGNMKKVTKGIFVITPNGVEIDSFVADQIS EGNYNQL >gi|229269866|gb|GG666045.1| GENE 230 230934 - 231701 1281 255 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484957|ref|ZP_03915273.1| ribosomal protein S4e [Anaerococcus lactolyticus ATCC 51172] # 1 255 1 255 255 498 100 1e-139 MALEYNLDHISDKQKKTNIRKALSILEKAFYKRIEIKSFFLDPFEQKTIAEIANKNSIKI CFLGGNVDAERKIFVANYFYEPLYEPNYISVMEFESQDISHPDVLGALLSLGTDRNDIGD ISILDGKVEFAISLDQADFVEFNLSKIKNERITLIKKEDAKLDLIKPSYESHDGFVSSLR LDNLLGLILSTSRTRAKDIVKARLVKVDYQIIEDPSIQVDENSLISVRRFGRFIFDKIDG LSKKGNYHISYRKVK >gi|229269866|gb|GG666045.1| GENE 231 231698 - 232138 308 146 aa, chain + ## HITS:1 COG:PM1663 KEGG:ns NR:ns ## COG: PM1663 COG0597 # Protein_GI_number: 15603528 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Pasteurella multocida # 3 137 10 151 165 90 41.0 8e-19 MIYILIIVLGIVLDRLSKLYAINNFIEKPINTPFINLTYLENRGAAFGILQDKRIFFLII TLAIVLYLIYYFYKSYKSNPVILNVSIAMIISGALGNFYDRFFNGFVVDFIEFSFFTFPV FNIADIFVTLGCGLMILYIVFIHEDK >gi|229269866|gb|GG666045.1| GENE 232 232125 - 232793 457 222 aa, chain + ## HITS:1 COG:lin1190 KEGG:ns NR:ns ## COG: lin1190 COG0692 # Protein_GI_number: 16800259 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Listeria innocua # 1 220 2 221 224 256 54.0 3e-68 MKINNDWDLILKEEFEKEYFKKIESFLDKAYEEKNIYPPRDEIFKSLELSSFEDTNVVIL GQDPYYNPGQAEGLSFSVKKGVKLPPSLRNIYKEMNNDLGLEPAKNGTLISWARQGVLLL NASLTVEEKKPNSHKSIGWQIFTDKIISLLNERERPLVFILWGNFARSKKALITNSRHLI LESAHPSPLSARNGFLGSKPFSKTNEFLKKNNLKVIDWEIED >gi|229269866|gb|GG666045.1| GENE 233 232790 - 233698 575 302 aa, chain - ## HITS:1 COG:CAC0978 KEGG:ns NR:ns ## COG: CAC0978 COG3359 # Protein_GI_number: 15894265 # Func_class: L Replication, recombination and repair # Function: Predicted exonuclease # Organism: Clostridium acetobutylicum # 15 172 32 194 274 64 31.0 2e-10 MISKKIRINGKKLNKDELVLDIETTGLDFRNDKLVLLGLVKIENDSAYIFQHFAQDDSEE IKLLNIYLREIKNKKIITFNGDTFDIPFLNSRLISHKLFPVFPESSQDIYKIIKWHSKFF SYDSMKLVAIEKFIGIERNDPSRYKAISKLSEDILTRDKPYPILKHNENDLIATEALSDI ENFYINKLSIDSKIGKFWICKANINKDIGNFEFESEKKLEDLFVAENNYQISIKDTTIKL NIHVLYGSFNRDINGFVTINHFDLKNESNIEVNDKLLIIREDRIYNYKNLLNLCKNIIEN HY >gi|229269866|gb|GG666045.1| GENE 234 233799 - 234908 735 369 aa, chain + ## HITS:1 COG:TM1692 KEGG:ns NR:ns ## COG: TM1692 COG1104 # Protein_GI_number: 15644440 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Thermotoga maritima # 2 367 3 378 384 226 35.0 4e-59 MIYLDNAATTKMYDEALKAYVDVCKNYFANPSALHSFGMEAENLIKDTKKYIGKLISSNE SEIFFTKSATESNNIAIKSFEGVALTSKIEHSSVFNAFKHANFDEIRYVNNDKYGFLNEE DLKNKLDDKVTFVSFIYVNNEIGTIQDIKNISKIIKDYNKDIVIHIDATQAMGKIPCDVN ELGIDIMSFSAHKFHGPKQLGGLYIRKNAQGKIRPLLDGGYQEIISSGTNNPPAIYACGI ALKKQVESNEYEYIKELNHYLRTLIEDNIYDTYIISPLNNSSPYILDVAFANIKSEVLLH MLEEEEIYVSSGSACSKGDYSRILSALGIEKKYMDGAIRFSFSNEITKEDLDCTLKVLKS SIDMIRMVI >gi|229269866|gb|GG666045.1| GENE 235 234908 - 236071 876 387 aa, chain + ## HITS:1 COG:CAC2971 KEGG:ns NR:ns ## COG: CAC2971 COG0301 # Protein_GI_number: 15896224 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis ATP pyrophosphatase # Organism: Clostridium acetobutylicum # 1 386 1 381 384 313 43.0 4e-85 MEWMLSVSFGEIFLKGKNRHIFYKTAIDNIKRNIRDIPYEDMYSESSKLYIKADKKDFDK LKNNILKVFGISYVSYVIKTSKNLDDIYKACKLDLEEYFTGKNYTFKVDCKRTDKAFEFK SPELSAKIGGFILRDFPNLKVNVHNPDFRVFIDVKDNVYVYSKRFKGLGGLPIGSSGKGL LLLSGGIDSPVAGFMVAKRGMKIDCLHFHSYPFTSKRALQKAIDLAEIMSAYTGKMRVYS VNLANIYKAINQNCERRETTILSRRFMMRIANKISEANGYQALITGESLGQVASQTIESV AVINDSSDLPILRPLIAMDKKDIIDISLKIGSYDKSIEPYDDCCSIFAPDSPVTKPKLNF IKMSEENLDIDALEDEAIKNMEIIDIA >gi|229269866|gb|GG666045.1| GENE 236 236170 - 236481 524 103 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484963|ref|ZP_03915279.1| ribosomal protein L21 [Anaerococcus lactolyticus ATCC 51172] # 1 103 1 103 103 206 100 1e-51 MYAIIKTGGKQYKVSEGDLVRVEKLAYEVGETVDFDQVLLVSNNGDLKVGAPLVEGAKVT ATVEDQNKDKKIVVYKYKPKKQYRKKHGHRQPYTLVKINSISL >gi|229269866|gb|GG666045.1| GENE 237 236481 - 236798 330 105 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228002494|ref|ZP_04049488.1| predicted ribosomal protein [Anaerococcus prevotii DSM 20548] # 1 103 1 102 103 131 59 4e-29 MININLLINKKDEIVGFEIEGHANYDEYGKDLVCSAVTILAYSCVNSLDKYADDVNFSDN EIIMTVSISSPNRDTDVIFDYFKTGIETLLGNYGSYVKLNYKEKI >gi|229269866|gb|GG666045.1| GENE 238 236795 - 237076 468 93 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484965|ref|ZP_03915281.1| ribosomal protein L27 [Anaerococcus lactolyticus ATCC 51172] # 1 93 1 93 93 184 100 3e-45 MILNINLQRFSSKKGVSSSKNGRDSRAKRLGVKRADGQFVNAGTIIVRQRGTKIHPGNNV KRGSDDTLYASCEGVVKFERKGKSRKQVSVYAQ >gi|229269866|gb|GG666045.1| GENE 239 237131 - 238411 1494 426 aa, chain + ## HITS:1 COG:CAC1260 KEGG:ns NR:ns ## COG: CAC1260 COG0536 # Protein_GI_number: 15894542 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Clostridium acetobutylicum # 2 424 3 422 424 387 52.0 1e-107 MIDIAKISIKAGDGGNGAVAWRREKYEPTGGPAGGDGGDGGSIIIKATRNLSTLDEFRYK KNFKAENGEQGGKSKKFGKKGEDLYIPVPVGTLIREAESNTIIKDMKNDGEEFLIAKGGR GGRGNVHFKNSIRQAPRFAESGKKGQEIDLIFELKVLADVGLVGLPNVGKSTLLSVITKA RPKIANYHFTTIDPNLGVVKVDNERSFIVADIAGLIEGASEGSGLGHDFLRHIERCRILI HLVDISGLEGRDPIEDFKLINKELKLYNKKLSEKPMIVALNKCELDYNDNAAKFIEQYDD SYKIFKISAATTAGIKEMIDYVTEELEKSSEEEFALYEEVDEKFLEDFYNKEIDFDLNIK KENDIYLVYGKRVDNLLKKVNIDDYDSMIYFESTLREMDVFDKLKEMGIQDGDSVAVGDI VFEYYE >gi|229269866|gb|GG666045.1| GENE 240 238420 - 238704 197 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15674474|ref|NP_268648.1| hypothetical protein SPy_0307 [Streptococcus pyogenes M1 GAS] # 1 85 1 85 102 80 43 9e-14 MLTGKQRAMLKQEAHDFKPIINIGKFSISDQLLDAIDEALEARELIKIKILNNNLDDADY IIDTIVEKLNCEFISHIGSIFTIYRKNDTNIYNL >gi|229269866|gb|GG666045.1| GENE 241 238704 - 239300 572 198 aa, chain + ## HITS:1 COG:CAC1262 KEGG:ns NR:ns ## COG: CAC1262 COG1057 # Protein_GI_number: 15894544 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Clostridium acetobutylicum # 4 197 5 199 200 131 40.0 1e-30 MRIGLYGGTFDPIHLGHLIVIENAINQMDLDRVIILPSSNPPHKKNINKTKADLRVEMVY EAIKDNPKIILSTYESSNDEVRYTHETLDYFTSHLSNHEIFYIMGEDSFMTIDSWRNYEK ILGYNIIVFARDGIEEDSKLVKKVNKIRKANPNIYLINILNVNISSTLIRTLVKEDKSIK YLVRDEADYIVKNRHLYE >gi|229269866|gb|GG666045.1| GENE 242 239293 - 239877 662 194 aa, chain + ## HITS:1 COG:CAC1263 KEGG:ns NR:ns ## COG: CAC1263 COG1713 # Protein_GI_number: 15894545 # Func_class: H Coenzyme transport and metabolism # Function: Predicted HD superfamily hydrolase involved in NAD metabolism # Organism: Clostridium acetobutylicum # 6 186 6 188 189 145 46.0 6e-35 MNDLTKIYEKLKHDIGEKRFEHSLRVAKTAEKMAGKFGVDPKKAFMSGLVHDCAKYNEES YIKKFNIDRAAYPVSSIKDPVLHAFLGAEVAKKVYNIYDEDILNAIKYHTTGREAMSDLE KIIFIADAIEPGREFEGIENIREVAYNNLDDALLLLLDSNIVFLINKKALINPLSFEARN YLIEEKNGKIRCNS >gi|229269866|gb|GG666045.1| GENE 243 239852 - 240160 385 102 aa, chain + ## HITS:1 COG:aq_1272 KEGG:ns NR:ns ## COG: aq_1272 COG0799 # Protein_GI_number: 15606493 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Aquifex aeolicus # 1 102 1 103 109 87 48.0 8e-18 MEKLDVIVKTLEDKLADDINVIKLEDSSVADYFIVATGNSINQTRALADYIEDDLHKEGY DIKSKEGFREGEWILIDAGDIIVHIFTQKQREFYDLDNLWEN >gi|229269866|gb|GG666045.1| GENE 244 240188 - 240832 701 214 aa, chain + ## HITS:1 COG:BH1333 KEGG:ns NR:ns ## COG: BH1333 COG1555 # Protein_GI_number: 15613896 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Bacillus halodurans # 9 208 18 203 210 103 35.0 3e-22 MPKDRKDKIIFAGIIFLAFLLANLFANGGFKNLLNKNEDEIEMTSSVDENTEKDKEEVRD DLSSQDKKVYISGEVKNSGVYDIKDGDRLDDLVKRAGGFTDKADKNSINLALRLEDQMKI YIPNVDENQNINTNNTNLTTGDTTSNAATSSSQKINLNLASKEELMTLPNVGEKRAQAIL DYRKEKRFEKIEDIKNVKGIGEKFFEAMKDLITV >gi|229269866|gb|GG666045.1| GENE 245 240841 - 241242 395 133 aa, chain + ## HITS:1 COG:PM0317 KEGG:ns NR:ns ## COG: PM0317 COG1959 # Protein_GI_number: 15602182 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Pasteurella multocida # 1 130 1 131 154 96 37.0 1e-20 MKLSTRGRYGLRAICYIAENQDKGFIPVSEISEKLNLSENYLEQLVRVLKKDGLIKSSRG PKGGYKIKSDLSSITIGQILRSLEGDMTTSECVSGKFDCSEKCDAYDLFSKLDYLINAAI DSITLENIVKHEI >gi|229269866|gb|GG666045.1| GENE 246 241252 - 243870 2663 872 aa, chain + ## HITS:1 COG:CAC1678 KEGG:ns NR:ns ## COG: CAC1678 COG0013 # Protein_GI_number: 15894955 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 872 1 878 881 721 46.0 0 MKNLGMNELRKSYLEFFGNEKNHTLLKSFPLTPIDDDTLLLINAGMAPLKKYFTGELKMK NNRATSSQRCVRTGDIERVGKTERHGTFFEMLGNFSFGDYFKREAINWAFEFLTKKLEIN KDDLWVTVYYDDDEAYNIWHDEIGMPAERILRQGKEDNFWELEVGPCGPCSEIYVDRGPE RAVDENDNQPGNDNSDRFMEVWNLVFTQFNKDNQGNYTNLSHPNIDTGMGLERIAMILQG KDNIFEIDVMKEIISEIEKLSGKTYKANKVDDVSIRVIADHAKAMTFLVSDGVIPSNEKR GYVLRRLIRRAYRHGKLLGIEGPFLNKIVDKVIETYKVEYDELVDNMDNIHKVISDEEDR FQKTINQGLEKLDSLIADMEKNNIKILDGSEAFKLYDTYGFPLDLTKEILEEKNLDVDDE KFEEEMENQRNLARNARKTDNKHKHDNLLADHLEKTDFQGYENFDLEGKLLAIFVDGEEN SSIKAPNKGIIVSDKTSFYPEGGGEVADTGFIKTSNACAKVVDVQKKNDIIFHYVEVTEG EFVRGSVARFVIDLERRLDIQRNHSATHLLDKALKNVLGQNINQAGSLVDEDKLRFDFTY NKALSNEELRKIEEEINAKIREQLPVKKEYMDYKKSEELGAVALFEDKYKDIVRVVSMGD YSIELCGGCHVNNTAEVLMFKIKSESSAAAGVRRIEAITGKAVFEELISKENTIKEIAND LDANINNIKSKINSLKSEIASKDSEIKRLKSQSNKDVYSELKSKIEKVNGVNLLIAKFDN ASVDELRELENKFKNEYDNLVIIFATVSDKIIFTVSVDDNLTDKYNAGKIVREIAQITGG NGGGKKNFAQAGGSDISALDKALKRAYEIIKE >gi|229269866|gb|GG666045.1| GENE 247 243874 - 244134 401 86 aa, chain + ## HITS:1 COG:SPy2114 KEGG:ns NR:ns ## COG: SPy2114 COG4472 # Protein_GI_number: 15675864 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 8 84 5 81 89 79 51.0 2e-15 MTDINKLNETMLFKREDIEKNNIREILTTVYKALEDKGYKPNSQIVGYLLSGDPTYITAH NNARKLIRAVDRDKILEELLNNYINE >gi|229269866|gb|GG666045.1| GENE 248 244127 - 244546 435 139 aa, chain + ## HITS:1 COG:lin1537 KEGG:ns NR:ns ## COG: lin1537 COG0816 # Protein_GI_number: 16800605 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Listeria innocua # 3 137 2 138 138 123 49.0 1e-28 MSRIMGLDVGDKTIGVALSDPLFITAQPYETIKRTKAKFDIDRIEKIFVENDISLIVVGL PKNMNNTMGPQSMRIISFVDLIKKRIDTEIVYQDERLTTIQSESVLIDMSVRRENRKAHI DKIAASFILQTYLDRRNNE >gi|229269866|gb|GG666045.1| GENE 249 244539 - 244781 358 80 aa, chain + ## HITS:1 COG:no KEGG:Apre_0939 NR:ns ## KEGG: Apre_0939 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 80 1 80 80 62 56.0 6e-09 MNSIFLLDENNNEVEFNIVDTFGIDDKNYAALKKIGDDMIMILEVYNTNDLINFKTIEDS NELNEIIEFYEEMKREKDEH >gi|229269866|gb|GG666045.1| GENE 250 244771 - 245211 415 146 aa, chain + ## HITS:1 COG:CAC1682 KEGG:ns NR:ns ## COG: CAC1682 COG0735 # Protein_GI_number: 15894959 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Clostridium acetobutylicum # 1 141 7 148 151 97 31.0 6e-21 MNIDEVRKIFEKNNQKFTKQRELIFNVLKSSSKKHLTPEQLFSIVHQDHKQVGIATIYRT LNIFDELGIVNKQEFTDQAYTYEIIDPESDHHDHIICTSCGKILEDEFLSYDDVKKSLKE NYNFDLSYYSLRIYGICSDCQNNEEK >gi|229269866|gb|GG666045.1| GENE 251 245211 - 246887 1643 558 aa, chain + ## HITS:1 COG:CAC1683 KEGG:ns NR:ns ## COG: CAC1683 COG0595 # Protein_GI_number: 15894960 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Clostridium acetobutylicum # 1 553 1 555 555 621 54.0 1e-177 MTNEKKLRIIPIGGLHEVGKNCALVEYGNDMIMIDCGLTFPNEEMLGVDIVIPDFTYVEE NKQKLKGIFVTHGHEDHVGAIPYFLKNVDTNVYCSKLTKGLIENKFKEHGLNPNKIKMVN VNNTVKAGSLSAEFIRVSHSIPDSCAIAVKSPVGTIIFTGDFKMDFTPIDNDPTDIQRLA ELGKKGVLALFADSTNVEREGFSLSEKVVGETFVEIFGQAKSRIIVATFASNLHRVQQII TAAEKYNRKVALSGRSMLNNVRIANELGYLNIKKNTLIDMKAIKKYADDELVILSTGTQG EPLSALTRMANKEHRQITLNETDMVILSSSAIPGNEMAINTTINNLTKIGCKIIYSSLAK VHASGHACQEEIKLMYQLIKPKYLIPAHGEIRQLQKHSEIAQDMGQPKENIFICENGDVI EFTKKSAGIKGKVQAGNVLVDGSGIGDVGNIVLKDRKHLSEDGLLVVSITFDRHTQELLA GPEIVSRGFVYVKENQDIIENAKDVVLRSINKCKKQDIKALSQIKYQIREDLKSYIYNEL GRDPMILPVISEIEDGKY >gi|229269866|gb|GG666045.1| GENE 252 246874 - 247512 586 212 aa, chain + ## HITS:1 COG:CAC1686 KEGG:ns NR:ns ## COG: CAC1686 COG4122 # Protein_GI_number: 15894963 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Clostridium acetobutylicum # 1 212 1 216 216 162 39.0 4e-40 MGNINYEHTSLFIEDLLNDTDFVELRKYAKENDVPIMNSQTKAFIISILKIAKPKKILEI GTAIGYSSLCFKKYTGADITSIELDKETADIARKNFEKYNVNVNLINDDAMKALRNINQG FDFVFIDANKSRYLDYFKITSKLLNEGGIIIADNVLFRGEVCNDDIMEKRKNTLVKRLRN FLAYITDLDDFITSVIPIGDGLTLSVRRNNEK >gi|229269866|gb|GG666045.1| GENE 253 247502 - 248737 1227 411 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 5 407 3 403 406 432 52.0 1e-121 MKNRKVELLAPAGDFEKLKTAIKFGADAVYLAGDNFGLRANAKNFNNDELREAVAYAHER NVRVHVTMNIMPHDGDMEGIVEYLENLDTIGIDALIISDPGIFSLAKKYTNIDLHISTQA SVTNSATVNFWYEMGAKRIILARELSLDEITEIRKNAPEDMEIECFVHGAMCISYSGRCL LSSYMTGRDANRGDCAQPCRWKYSLQEETRPGEYFPIEEDGHGGTFIMNSKDLCLIEEVD KLIEAGIDSFKIEGRMKTPFYVATVIRSYRQVIDSYYEGTYSKEVCKKYFDEISKASHRY FTKGFFYKKTDENDQIYTSSSYIRNYDFIGVVKDYDKESKIATIEQRNRFFKGDQIEIFG NSKDFYTLIIDYMEDEKGQEVEVANIPKQLIKIKVDFPLEEGDILRKEIKD >gi|229269866|gb|GG666045.1| GENE 254 250387 - 250617 336 76 aa, chain - ## HITS:1 COG:no KEGG:Apre_0944 NR:ns ## KEGG: Apre_0944 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 76 4 77 77 72 83.0 8e-12 MTNQKISNANQYRGNDELDKKMRESDKNSGGESLDKKLGPDQENLRSINDEADENSNVGA EARRTRADFSENPSED >gi|229269866|gb|GG666045.1| GENE 255 250697 - 251917 1147 406 aa, chain - ## HITS:1 COG:CAC0476 KEGG:ns NR:ns ## COG: CAC0476 COG2195 # Protein_GI_number: 15893767 # Func_class: E Amino acid transport and metabolism # Function: Di- and tripeptidases # Organism: Clostridium acetobutylicum # 1 401 1 404 408 427 54.0 1e-119 MENITKRFLKYISFDTKSDPEKGESQKPSSDGQLLLANELKKELEDLGLNPTINEEGFLF CKIPANSDKDLPKIGFISHMDTSPEMYGKIEDPQIINYEGGDIKLNDEKYIKVEDFPYLE KLKGTTIITTRGKSLLGADDKAGIAAIMTAIEHIVNNPDFKHGEIRIAFTPDEEIGTGCD TFDVKNFDADFAYTIDGGILGELEYESFNAADAKITIHGKSIHPGSAKNTMINSITIANE FDRLLGYVRRPEHTEGYEGFFHLLKINGDIETTKLEYIIRDHDRNTFEKMKKEIISNADF LNEKYGNIIDVKLTDSYYNMGDIIKDNLDIVEYAKKAMEDLGIKPLISPIRGGTDGSKLS FMGLPCPNIFTGGMNFHGIYELIPIEHMVKSSQVVLEIIKLIEMSK >gi|229269866|gb|GG666045.1| GENE 256 251996 - 252430 551 144 aa, chain + ## HITS:1 COG:aq_220 KEGG:ns NR:ns ## COG: aq_220 COG0756 # Protein_GI_number: 15605775 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Aquifex aeolicus # 1 143 1 148 150 131 50.0 4e-31 MKKNILKIKTDGQIPAYATEHSAGIDLYCNSDKDIIIKAKETVKIHTGIFVEIPEGYFGA VYPRSSTGVKKHLMLANTVGVIDSDYRGELMIFFYNYGEEEQVIENGDRLAQLVIQPYLS CDIEKVDELSDSERGDGGFGSTGK >gi|229269866|gb|GG666045.1| GENE 257 252436 - 252957 455 173 aa, chain + ## HITS:1 COG:no KEGG:Apre_0947 NR:ns ## KEGG: Apre_0947 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 173 6 177 177 145 47.0 8e-34 MNRFLRKNKYNLFLLVAFIVVLIIIGFFIKAKIDDINMAKYDNNIIIIKGNGDEIKSFSI RELKKRAGSSKEVYINNGLEKVKVEGVSLEKLVGNLDYNLRERPVISIEDTDGNSNRFPM SVALEVDRVYLVYRIDGEPVIEYNPSYGSLVVIDTTTKSANSWITNVKTLNIQ >gi|229269866|gb|GG666045.1| GENE 258 253018 - 255627 2207 869 aa, chain + ## HITS:1 COG:CAC1837 KEGG:ns NR:ns ## COG: CAC1837 COG0249 # Protein_GI_number: 15895112 # Func_class: L Replication, recombination and repair # Function: Mismatch repair ATPase (MutS family) # Organism: Clostridium acetobutylicum # 9 859 2 859 869 652 43.0 0 MTSKFKYENLTPMLRHYVDVKNDFKDALLLYRVGDFYETFFDDAIITAKVLSLTLTGKEC GHVDRAPMCGVPHHVIDTYVNRLVKKGYKVALCDQIEDPKDAKGLVKRAITRVITPGTLT DMESLENKENNYLLSIFENEYGLAMAYCDISTGKLVGLEIKTLSQNLGKKAIDQIEKINP SEMVLTSNFDNEDIKKYLNLNNQIFINYINFTTDYENRVKTVNNYLGKDNLNKIKDKRLI IVALANLLDYIYKYYEEKLDHINNIEILKINEFMEIESNTRKNLELTRNLSTNNKENTLI SILDQADTVMGSRMIHDWLERPLIDRDKINRRLDLVDGFYEDSILSRNVSNLLDSVYDLE RLLAKISYKRANARDLISLKNSIKEMPKLKHVLADSTNNLIKNLGLNLPDVEDIYELINK SIVDEPPINITEGGIIKSQYDKDLDNLKEMADTAEDKLIEYESKQRELTGIKNLKVIFNK NNGYSIEVTKSNIDKIDQSYIRKQTLKNQERYTTEELENISSLILNGKEKINLLEYELFN KIVENILNSTLRLQSLSKMIANIDSLNSFAKIAHKYSYCKPNITESNEISIIEGRHPVIE INLDENEFIANDTNIGQDDNLIQIITGPNMAGKSTYMRQMALIIIMAQIGSFVPAKSAEI GICDKIFTRIGASDNISKGESTFMLEMNEVSNIIKNSTEKSFVILDEVGRGTSSDDGLSI AMALVEYLSKHKKVKTVFATHFHELTVLESELKNVRNLKIEILEENNNLIFLRKISRGKS DRSYGIEVAKLSGLPDEILENAKNIMEKLANEDFFEVNKGKEIKNSLEDIKNKKINELKS YTDKININELTPLEAMNQLNILMEKIGEI >gi|229269866|gb|GG666045.1| GENE 259 255627 - 257390 1434 587 aa, chain + ## HITS:1 COG:CAC1836 KEGG:ns NR:ns ## COG: CAC1836 COG0323 # Protein_GI_number: 15895111 # Func_class: L Replication, recombination and repair # Function: DNA mismatch repair enzyme (predicted ATPase) # Organism: Clostridium acetobutylicum # 1 587 1 620 622 292 34.0 1e-78 MAIKKLDKETVEKIAAGEVIESPLSIIKELVENSVDAGSKNITVEIKNGGKTYIRVTDDG SGIAKDDIELAFEKHATSKITKFDDLFKISSLGFRGEALPSIASVSKVVAISKTQDADVG TKLDLSGRVKVKKSIATNKGTSIIVEDLFYNMPARRKFLKSDIAESNKITKLMYAFAIGY KDVSFKYIKDDRIQFQSNTSLDLKFKISDLLDNLLEENLLELKATNTSYRIDGEIGLPTY YRGNRSMQYIFVNDRLIEDEEITKTIERQYIGLIPQGRFPVFFIFIYTDPKNIDVNIHPN KKLVKYTYEDELVELINDSVKNLLKSKQAINSIDIKDKKQNEILDFTDYKAVLDKYSPAE MLIREEEKPYNSIESNQDFFNDKISIDLYTNEEKIREDSFFSDIEVPSYKTSIFRRYSIF EDKEKIYILDHRKAEEKIKMSEYINDYNSNKISRQLVLNPIKINLNKIDIGRYEQKQDLF NKLGFDIELISDKSVIIREIPIIFDIPENNNFFYEILDFDDNENILFKNLRKLVKNISFR KGNTINKDEAIELYKKLMKEEDPYRTYDGKPTIITLEDKDLEKYFER >gi|229269866|gb|GG666045.1| GENE 260 257380 - 258327 664 315 aa, chain + ## HITS:1 COG:BH2366 KEGG:ns NR:ns ## COG: BH2366 COG0324 # Protein_GI_number: 15614929 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Bacillus halodurans # 1 314 1 310 314 228 39.0 1e-59 MKDKFIIITGPTASGKSDIAIDIAKKIEGEIISADSQQVYRDMDIGTNKVTNPSYVNHHL LNIVNPNEEFTVDDFKKDAEEIISTLNSRFIMPIITGGTGFYIDSLLFDMNYGEVKKDIY TRMALQKLADVHGNNYLYEKLLEIDPKTANKYHPNELNRIIRALEIYEITGEKPSEKRTG EKVLKSNINPILIFLNYRDRKILYNKINDRVNDMINLGLINEFNFLIDKYKLDENSQSMA AIGYKEIFPYVRGEISLDEMVSLIQRNTRRYAKRQITWMKRYLNYPFAREIIMDDLNKED ATLIIEDLIKGMYEF >gi|229269866|gb|GG666045.1| GENE 261 258317 - 259594 1031 425 aa, chain + ## HITS:1 COG:SA1148 KEGG:ns NR:ns ## COG: SA1148 COG4100 # Protein_GI_number: 15926890 # Func_class: P Inorganic ion transport and metabolism # Function: Cystathionine beta-lyase family protein involved in aluminum resistance # Organism: Staphylococcus aureus N315 # 19 425 7 412 412 399 48.0 1e-111 MNFKEIYENYNIDNEYDDLIEDSERELEELFKKHEKIAEYNQYKVLKAFNENSLQTSDFN SSTGYGYADTGRDTVEAIFSSIFKSEDSLVRPSIVSGTHALSIVLFSLLHYGDKLLSITD DPYDTMQQVIGIAGNKKGTLIEKGILYDKLTLDENNKIQYDKIKDKIDDKTKVILIQRST GYTQRRAFTIDEIEKAIIEIRKISKDIVIFIDNCYGEFTETREPIEIGADIVAGSLIKNL GGGIAITGGYISGRKDLIEYCANTLTAPGIGKDEGLSFGINRLVVEGLYFAPHIVKEAIR VALLFASVFNKLGYNVTPSLDDPRSDVILAIKLENPEKLKTFCKAIQEACSVDSTFVPEA YPMPGYEDPVIMAAGGFVEGATSELSADGPLRAPYMAYLQGGLNYYHGKLALKIVLDRFA KNNFL >gi|229269866|gb|GG666045.1| GENE 262 259635 - 260624 775 329 aa, chain - ## HITS:1 COG:CAP0080 KEGG:ns NR:ns ## COG: CAP0080 COG0582 # Protein_GI_number: 15004784 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Clostridium acetobutylicum # 7 325 2 311 323 199 40.0 8e-51 MEKFIKPLLLTDYLNYLKSIKGLSESTIKEYAYDLETFIEYQIVRKIYNNNKKDYENDFD YKKINFFVDNIFFEKITIQDFYAFLSYLDNDKNDSATTRSRKISAIKSFYKYMYSEIEVI NTNIADKLTNPKISQRQPVYLTLSETERLIETISKEKNTFLKARDLAIVFTFLTTGMRLS ELISIDLSDVNKDSFNIIGKGNKERTVYLTKNCQDLINNYIVIRSEYLKDDTVNALFIST RKNRISNRAVQSTIEKYLAKAGFDTSVYSTHKLRHTAATLMYKYGNVDIRALKDILGHAS VSTTQIYTHLDNEDLKNAVNKNPLSDLEF >gi|229269866|gb|GG666045.1| GENE 263 261099 - 262652 1579 517 aa, chain - ## HITS:1 COG:CAC1816 KEGG:ns NR:ns ## COG: CAC1816 COG1418 # Protein_GI_number: 15895092 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 2 517 1 514 514 467 52.0 1e-131 MLNNMNPIVVLIIVVAFVLLAFYFGYLYRKKIGESVIGGAENLSRQIIDDANKQAEALRR ETLIDAKDEISKLKSENEEMLNQARNDLNKREARLIKKEESLDNRSLLIDKKSDQISSDQ KKLKQKEEKIDKLIEQQELELQNIAGLTNNEAKEIILAKVKSETIHESARMIKEAEEKVK AESKKMATEILATTIQRFAPEQVAEYTVSVISLPNDEMKGRIIGREGRNIRAFEQAAGVD LIIDDTPEAVVISCFEPVRREIAKVALEKLIQDGRINPSRIEEMLQKASDEVETRIIEDG EAAAEAVGIINLHPQLIRLIGKMKFRTSYGQNILKHSVEVALLAGMLADEIGADSQLAKR GGLLHDVGKAIDQEQEGTHVALGVEAATKYGENKYVINAIQSHHGEVEPNCVESILVQTA DAISAARPGARRESLESYIKRLENLEGIANSFEGVEKSFALQAGRELRILVKPEKISDDE MIVIAREIAKKIENELEYPGEIKVNLLRESKAIDYAK >gi|229269866|gb|GG666045.1| GENE 264 262768 - 263295 534 175 aa, chain - ## HITS:1 COG:SA0487 KEGG:ns NR:ns ## COG: SA0487 COG1045 # Protein_GI_number: 15926206 # Func_class: E Amino acid transport and metabolism # Function: Serine acetyltransferase # Organism: Staphylococcus aureus N315 # 12 171 9 168 213 172 56.0 2e-43 MLNYNEYKEELIKNALANDPALKSEEEAILFSAGIKALLSHYIAHKLYLQGKVYEAQEIA FKSRMETGIEIHPGAKIGRRCYIDHGMGVVIGETAEVGDDVLMYHSVTLGAVTNEKVKRH PTVGNHVMIGAGAVLLGNITIGNNCQIGANSVVLEDVPDNSTAVGAPARIIAHKK >gi|229269866|gb|GG666045.1| GENE 265 263282 - 264199 809 305 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 301 1 305 308 316 54 1e-84 LMIKNNSTDLIGGTPLLKLNSLKKEGRADIYVKVEKNNLAGSIKDRIALYMIEDAEKSGK LKKGGTIVEPTSGNTGVALAAIAAAKGYNLILTMPASMSIERAKLAMAYGAKVIRTTEGA LQGAVDKAKELAEENGYFLPDQFSNPANIKAHYETTGPEILSEIKPDAFIAGVGTGGTVT GTGKKLKEENPNIKVYAIEPAESPLLSGGKAASHKIQGIGGNFIPKNLDFDILDGIVDVK SDDAINMSRKIAKEEGLAVGISSGANVVGAIEIADKLGEGKVVVTVLPDTGERYLSTELY DNAQL >gi|229269866|gb|GG666045.1| GENE 266 264354 - 265022 1022 222 aa, chain - ## HITS:1 COG:sll1261 KEGG:ns NR:ns ## COG: sll1261 COG0264 # Protein_GI_number: 16330738 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor Ts # Organism: Synechocystis # 3 218 4 214 218 182 52.0 5e-46 MAISAKLVKELRERTAAGMMDCKKALEEAGGDIDKAQKILKEKGQATLDKKSGRIAAEGV IGSYIHNDKIGVIVEINTETDFSANTDTVKDFARDIAMHIAASAPKYISEADADEADVAE QREILINQAINESSDNMPEDKKKMIAEKKVEGRLKKWFSEVCLLDQPFIKDPDLTIEQLL RHTANEVGENIKIRRFARFQVGEGLEKKEEDFAAEVASQMNM >gi|229269866|gb|GG666045.1| GENE 267 265038 - 265898 1454 286 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227484994|ref|ZP_03915310.1| ribosomal protein S2 [Anaerococcus lactolyticus ATCC 51172] # 1 286 1 286 286 564 99 1e-159 MEEKTEVNMAVVSMKKLLEAGVHFGHQTRRWNPKMARFIFTERNGIYIVDLQKTANQIEE AYKVMRDIVADGGRVLFVGTKKQAQDSIQSEAKRSGQYYVSHRWLGGMLTNFKTIRKSVE KLQRYERMEEDGTFDLLPKKEVLQYQKEMDKLEKNLGGIKDMEELPDVLFVVDPGEEAIA VHEAKILGIPVIAIVDTNCDPDEVDVPIPGNDDAIRAVKLITSVMADAVIEANQGNEFDP SNEEVEEDEFEEDSEVEVEEENLSDEDLEEAAEEIKTQEFDENEAE >gi|229269866|gb|GG666045.1| GENE 268 266005 - 267408 1406 467 aa, chain - ## HITS:1 COG:BH2486 KEGG:ns NR:ns ## COG: BH2486 COG0552 # Protein_GI_number: 15615049 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 157 467 9 319 330 287 51.0 3e-77 MFNFFKKKKKKTEELENKNFIKDTEEKTTCDCCSKSNDDTTNDEFNKFNEANKNNNLIEE VEEKANEIKEEIKSEVEKVEKKTKEVVEEIKDEEKENKIKAGRFIDLTKSENTEKKTLKT EDLSLENTNKENEEDRSEENPNEANEELHEENLAEAEEFIEEKESIFDRLKKGLSKTRDS FTSSLSNLFTRNVKIDDDLYDELEEILISADIGMSSTIEIVDSLRSEIKKRSIKDSDKIY PVLKEIMTQKLDENNLDNGIKFEKGKLTVILVIGVNGVGKTTTIGKLANNFKNDGKKVML AAADTFRAAAIDQLQEWAERADVELIAHKEGADPSAVIFDAIKSARSKDVDILICDTAGR LHNKKNLMQELEKINRTIDTHAVNANRENLLVLDATTGQNAVSQLKEFKNVTDITGLILT KLDGTAKGGVIFPLQVEVEVPVKYIGVGEGINHLQKFDSNSFVEAMF >gi|229269866|gb|GG666045.1| GENE 269 267418 - 269682 1609 754 aa, chain - ## HITS:1 COG:BS_priA KEGG:ns NR:ns ## COG: BS_priA COG1198 # Protein_GI_number: 16078634 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Bacillus subtilis # 1 715 35 766 805 530 39.0 1e-150 MRVLVPFGKGNKTVVAFVYQIVEEFNCDYEIKDIISIIDDSKLVSDELLDLAFFMSKEYL SPIQLSLKQVLPPTTIDKIKTFYKAKVKGDDFLNFLQVERSREDIIRYYPDSLDLLNDLI KNDKVKIFYEARDKIKISFDTYIKLKDFNATISNNAIKQKKIIEYLKVNGLTKQSDLLKN TSSSLSSLKSLIKKNIIEEVQKEANKEIKLDVKNYDKHQLNKEQALAYQKILAKPDGKFL LFGVTGSGKTEIFLQVVEEVIKQGKEAIILVPEISLTPQTIERFSGRFKEKIAIIHSRLT PKEKFNQWMMIKNGEVKIAIGARSAIFAPFKYLGAIIIDEEHDSSYISSKDPKYHTREIA KFRANYHCCNLIMASATPSIKTMNEVRDGKLDFLHLRTRVNKNMPDISIVDMREELKNSN YSMLSIELQRQIRHNLENGEQTILFLNKIGHDSFTFCRACGYVVKCEACDVAMTFHKRVN KLVCHYCGRTKNQVNICPNCHSKKIKEFGAGTEKLEEEVRTLFPNANILRMDSMVATSKA RYEHMYKDMKDGKIDILLGTQMIAKGLDFENVTLVGIISADLSLNVGDFSAQETSFQLLT QVAGRAGRANKSGRAIIQTYKPENFVIQAVKTNDYQSFFESELEIRKAFSYPPFKNIITI KILNDDRVNTIDISMEFTKMLKEAMKDQVDIEIIGPNPCKISRINNKYRYNILMKVYDKD LDICRDTIGRIRNHLINKYTDTSFIVAINPANIN >gi|229269866|gb|GG666045.1| GENE 270 269786 - 270958 1079 390 aa, chain - ## HITS:1 COG:BS_yloI KEGG:ns NR:ns ## COG: BS_yloI COG0452 # Protein_GI_number: 16078633 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Bacillus subtilis # 1 386 1 392 406 320 46.0 4e-87 MLENKNILLGVSGGIAAYKVLDLCSRLKKVGANLNIIMTKSATEFVNPLSFETMGKCEVY TDLFVGHHEKVHHIELAKWADIMLIAPASANTIAKMANGIADNFLLSTYLACDKDVVIAP AMNTNMLKAKATQRNLKILKEDGIKIIKPEPGILACNTVGDGRLEEPIEIVDFLDEYFTE KDLSGKKIIITAGPTVEQIDFVRYISNNSSGKMGYNIANEARKRGAEVILISGPVNPFKI NGIKKIQIKTNTEMKDAIDRDFEDADALIMSAAPVDYKVEKASDKKIKKTGSSLKLELIE NTDIIKYFGSIKKNQTIIGFAAETDDLINNAKAKLEKKNLDYIIANDLKKWGAGFDVDTN VASIISKDKVVNLDIMPKSELANKILDLLR >gi|229269866|gb|GG666045.1| GENE 271 270960 - 271148 131 62 aa, chain - ## HITS:1 COG:no KEGG:Apre_0961 NR:ns ## KEGG: Apre_0961 # Name: not_defined # Def: DNA-directed RNA polymerase, omega subunit # Organism: A.prevotii # Pathway: Purine metabolism [PATH:apr00230]; Pyrimidine metabolism [PATH:apr00240]; Metabolic pathways [PATH:apr01100]; RNA polymerase [PATH:apr03020] # 1 61 1 61 62 91 85.0 1e-17 MKNPSFKTLSEVSPSRYEICMMCAKRARRIVNGSAPLTKEIEAKPVTQALNEIIQGKVTK KQ >gi|229269866|gb|GG666045.1| GENE 272 271148 - 271747 578 199 aa, chain - ## HITS:1 COG:CAC1718 KEGG:ns NR:ns ## COG: CAC1718 COG0194 # Protein_GI_number: 15894995 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Clostridium acetobutylicum # 2 190 3 190 209 196 55.0 3e-50 MKKGFLLVISGPSGVGKGTVLHDLMNTQTNLVYSVSATTRKKRDGEIEGVSYFYLNHDEF EKMIEEDKFLEYAHVHNNYYGTPKEFVEKKINEGKIVILEIDVQGALNIKKNTDNGVFIF LAPPSLKELKKRIVGRGTETDEDIKIRMNNAKKELQHIKDYDYIVINDHLNSAITSVNEI INAEKHKVFREENLEFKED >gi|229269866|gb|GG666045.1| GENE 273 271841 - 273583 1457 580 aa, chain + ## HITS:1 COG:BS_yloA KEGG:ns NR:ns ## COG: BS_yloA COG1293 # Protein_GI_number: 16078628 # Func_class: K Transcription # Function: Predicted RNA-binding protein homologous to eukaryotic snRNP # Organism: Bacillus subtilis # 1 579 3 571 572 306 34.0 9e-83 MSFDGIVTRKIVNELKKEILGGKIQKISQPSKNDIIFNIYSMRKSYKLFVSANNNEARIN FTEKKYENPEKPDNFCMVLRKHINQGKIIDIKQYGLDRVVELSIVSIDEMGFDTSKKLII EIMGKHSNVILTDTNYKIIDSIKRINEQMSSVRQIFPSLTYERIKSEKIDITDENFNKDI FYLNPKLPNSFQPYKIFYTYYEGLSPIIGKELVHRAKIDPRINWGLVSEDEKKELNNLFL ALRNDILNDNLGAYDYRDERKIKEYHAIRLNHLNFTENKYDLMSLAIDNFYSTNKSNDRL DQMKDSLLKKINSHKKSVKKKINILNENIAKEALADDAKKNADLLAANLYRIENKAKEII LEDFYNENKPIKISLNPMKSPWENINGYYNRAKKIKAAIVYAQADLPNQKSLLTYLEQLE DFITRADSISDLEDIRDEMQENKLIKKKAKDKKKAKPSKPLHYQTESGADIYVGKNSKQN DYITLKVARKDDLWFHVKDSPGSHVVLKTDHIYEEDILTAAYLAAKNSSLTNDNKVDVDY TEKKNVNKAKGAKEGMVYYEKFSTITIDLDKETKFNLKKI >gi|229269866|gb|GG666045.1| GENE 274 273641 - 273919 439 92 aa, chain - ## HITS:1 COG:BS_hbs KEGG:ns NR:ns ## COG: BS_hbs COG0776 # Protein_GI_number: 16079336 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Bacillus subtilis # 1 90 1 89 92 88 56.0 3e-18 MNKSELLNSISEKSGLKKVESEKALNAFLETVQEALVKGDKVQLVGFGTFEVRDRKAREG RNPRKPEEVIQIPASKAPVFKAGKTLKEAVNK >gi|229269866|gb|GG666045.1| GENE 275 274000 - 274908 913 302 aa, chain - ## HITS:1 COG:no KEGG:Apre_0965 NR:ns ## KEGG: Apre_0965 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 21 302 26 308 308 240 51.0 6e-62 MKKIKKVIISILSLCTCICLLASCAKSKDEANSIAIVDGKSIAKQSFDKELEFYLAFYTK KYGDSYLESKNAKGKTNKEILRDDLLDSMIKDQVMLNDLADKKIEIDDNTANKLRSDMEK ELGDKNSLKANIKALNMSEADFSDVIFNDSIRKMHYEYFLTHNKIKDSEILQYYKANEEL HKMYKYNVLVFDTKEACEEVKAKIKNQVDFRQALKSPVKNFDVINSDFVYIDDPLLVKSK LKEKDKVSDIFEDNNKFMILMINSYNENENELLMQTKDKYLKDAYDDYLNKLVKSAKIKV FI >gi|229269866|gb|GG666045.1| GENE 276 274880 - 275911 1439 343 aa, chain - ## HITS:1 COG:BH1177 KEGG:ns NR:ns ## COG: BH1177 COG0760 # Protein_GI_number: 15613740 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Parvulin-like peptidyl-prolyl isomerase # Organism: Bacillus halodurans # 2 283 3 261 333 119 35.0 9e-27 MKKKLLIAMLASTMVLGACGNQANDNKKDSKMEEKASDIKELDKGTIAIVNGEKISKDAY KAEMSFYGSMLASRQNLKNSIVQMMVQDKLIADDMKANKIEISDKEVNDAFLNSVKQFGG QEQFDKMLDDYNMDVEKFKETVKKDLMYKKHREWFEKEHPVTEEEIKQYYEDNKDKFAKR DASHILVADEKTAKEVKDKLDKGADFAALAKEYSKDTANAANGGELGTFSRGQMVKEFED AAFSLKEGEISGPVKTQFGYHIIKVNKIADSIEDNKEAITKALNDKKYSDYIKELNKKAN VVTEATIAEKKEAEKATEDKKVDTKEDKAEENKEDEKDKKGNN >gi|229269866|gb|GG666045.1| GENE 277 275911 - 279399 2991 1162 aa, chain - ## HITS:1 COG:BS_mfd KEGG:ns NR:ns ## COG: BS_mfd COG1197 # Protein_GI_number: 16077123 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Bacillus subtilis # 12 1156 12 1159 1177 816 40.0 0 MNKLIEQLINVDQIKKIKYGLKDYSPLYIQALTDGIKAHLALAIFELLGENVVFITDNPK RSEKFLQDINQISAKAKLYPDLDTNFYNIKSIDDKKINQRLECLISLSKGEKFITVTNFA AIKNKLTTLDRFNKSFVIIDEESIIDVDDFINSLSALNYNSTDFVEERGDFAKRGSIIDI WPINYEDPVRIELFDDEVDSIRIFDKNTQRTIKKIKNVEIGPANELLYDSDDYKKVIKAI SNDIDKKEVTNTKDQKLVDKYKQIISFLDQKMYVANKDLINAYRTENYSSFIDYLPAGTI FIFDDISRIYESVTKDDEKFLEDLTYQMENGEVFGSFANYLLDSSEIYKNISEKSIINFT SILKRTKLFSPRKIIDLKTIEAENFNKDIENFIRTSIDLAKRDKKVYVFAGSKSRKENLL KSFIDHDFLLAGFEENSTDFDKTPIIISDKNSSEGYYIKDVDLFVFTSKEVFGKTSSKKN NRKKVSSKNIINYSDLEIGDYVVHENNGIGIYKGLTKIERNDVEKDFILIEYRGNDKLYI PVDQMNLVSKYIGNRGEKPKLSALGSLQWQKSKQRAKKAVDEIADDLVKLYAKRAKEKGH AFSKDTTWQVEFENSFPYDETFSQLRSIEEIKADMESENPMDRLLCGDVGYGKTEVALRA AFKAIMDGYQVAFLVPTTILANQHYHTMVERFKDFPITCAMLSRFNTKAKDDKILKDIKS GKIDIVVGTHRLLSDDVKFNKLGLLIIDEEQRFGVKHKEKFKKFKASIDVLTLSATPIPR TLQMSLSGIRDLSTLDDPPEERLPVNTYVLEFDSGIIRDAILKEINRNGQVYFVYNRVND IEKLFLKIKDLVPEASIEIVHGQMSPRQIENIMMDFIDGKIDILLATTIIETGMDIKNVN TIVIYDSDLMGLSQLYQLKGRIGRGYRSSYAYFTYRSGKILTEIGEKRLKSIRDFSDFGS GYKIAMKDLELRGAGNLLGESQSGHVEAVGYDLYVKFLQEAVEKASGKEVKIKLENQTFI DIKIDAYIPNSYINDSSQKIEIYNRIANINDKSDYDALVEELIDVYGDIPVIVDNIMYVS LIKAIASENGFTEIREINNSIYLFFASKDNFTFEELKYINETYKGVMSLDLSDKPAFIIP AIKTKLLDTYELLDTIKKIRSK >gi|229269866|gb|GG666045.1| GENE 278 279392 - 279979 556 195 aa, chain - ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 1 189 1 187 187 185 49.0 5e-47 MYYIVGLGNPGLQYENTRHNVGFMTIDYLANKYNIDVRKLKFKSLYGQGEISGHKVMLIK PQTYMNNSGEAVRELRNFYKFDIDKLIVIYDDIDIDFGTVRIRKKGSAGSHNGMKSIIYQ IQDDKFPRIKVSIGKKPEKWDLANFVLSGFSKDEVSILEDEIRLAAKGIEIILKEDIDMA MNKCNSVKLVENNNE >gi|229269866|gb|GG666045.1| GENE 279 279979 - 280962 970 327 aa, chain - ## HITS:1 COG:FN1992 KEGG:ns NR:ns ## COG: FN1992 COG0462 # Protein_GI_number: 19705288 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Fusobacterium nucleatum # 9 323 2 315 316 371 59.0 1e-103 MSSKGNKYIQRGELKLLTGNSNIKLAESVAKNLGIELTKADINKFKDGEISIKINESIRG KDVFIVQPTSNPTNDNLMELLIMIDACKRASAGYINAVIPYYGYARQDRKTRGREPITAK LVANLLTVSGADRVITMDLHAGQIQGYFDIPVDHFSAIRLLSTHFQSFAFDKPEEFVVVS PDLGGVRRAREFADYLKLPIAIIEKRRPMPNVSEVMSVIGDFKGKHAIIVDDMIDTAGTI TNAADYLVENGAKDVYLVATHGVFSGDAITKLQKPSVKEVVITDTIALPEEKKIDKITQL SIAPLLAEAINRINTYESISGLFTVIE >gi|229269866|gb|GG666045.1| GENE 280 280965 - 282350 1429 461 aa, chain - ## HITS:1 COG:L134450 KEGG:ns NR:ns ## COG: L134450 COG1207 # Protein_GI_number: 15673865 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Lactococcus lactis # 5 442 6 442 458 338 42.0 1e-92 MIKTIIMAAGEGTRMKSETSKVLHKLINKEIIKYVKNASDFNQSETIIIAGKNKDKLKEL FPDVTIVEQKIGPGIPYGTGYAASLALDYIEDNDQVLILNGDIPLIKKESLENLIAYHAK TNSSCTILSTKIDNPKGYGRIIRDDNDNFIRITEDRDLNDGQENINEINVGIYIFKAQDL KEALAKIDSNNDQNELYLTDCIGVLKSENKIVTAFVSNDCDEFYGINNKYELYKASKILQ NRINKKHMLNGVVIESPDTTFIEEGVEIGSDTVISGFVKIYGNSKIGKSCLIDGSTRIIN STIEDNVRVDNAVIEDCYMEENSNIGPYSRIRPNSHIGRGVHIGNFVEVKNSRLGEGTKA GHLAYIGDSDLGKDVNVGCGVVFVNYDGKFKHRSIIGDGAFIGSNANIVAPVKVEKEGFV AAGSTITEDVSSGELIIERAEQKHIKGYVERKKERDKNHKE >gi|229269866|gb|GG666045.1| GENE 281 282352 - 283071 767 239 aa, chain - ## HITS:1 COG:SA1940 KEGG:ns NR:ns ## COG: SA1940 COG0813 # Protein_GI_number: 15927712 # Func_class: F Nucleotide transport and metabolism # Function: Purine-nucleoside phosphorylase # Organism: Staphylococcus aureus N315 # 1 238 1 236 236 253 55.0 3e-67 MTIPTPHISATSKDQIAKTVLMPGDPLRAKYIADNFLEDVTQFNETRGMLGFTGYYKGKR VSVMGSGMGIPSSMIYFNELFDFYDVDCIIRVGTAGSMQEDVKLHDIVIAQSACSESSIN DNLFGNIHFSVNPDFDLLVKAVEKSRELGYRTHCGQVHSSDQFYNNMEPKVFENLRKYGI LCVEMESYGLFMAARKHGKKALGIFTISDSLIENVSDSAENRQKSYTNMMQLALEVAEG >gi|229269866|gb|GG666045.1| GENE 282 283115 - 283558 550 147 aa, chain - ## HITS:1 COG:TM1080 KEGG:ns NR:ns ## COG: TM1080 COG0698 # Protein_GI_number: 15643838 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Thermotoga maritima # 1 140 1 140 143 151 52.0 3e-37 MKFVIANDHGGIDLQPAVCEKLQELGHEVVHVGTYDKESCDYSDFAVKACEKVINNEADF AILICGTGLGMSISANKIKGIRAACVSEPFSAKMSRAHNNANVLCIGARVIGSELCKMIV EEFAKTPFEGGRHQRRVDKICKIEEEN >gi|229269866|gb|GG666045.1| GENE 283 283707 - 285113 1588 468 aa, chain + ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 4 459 3 456 458 362 42.0 1e-100 MFEFNLDGHDYKYVHFIGIGGISMSGLAHLLFEKGYKVTGSDRSESDTVKILKNLGIEVY IGQRKENIKNPDLVVYTDAIADDNEELIEAKKLDAPVVTRGVFLGALMRNYKNSIAISGS HGKSTTTSMISKILLHSDENPTILLGGILDDMKGNVKVGNEDFLVTEACEYKGNIRYYFP QTVIILNIDEDHLDYYKDLNDIVNTFKEYLRNQDENSKTILNLNEENNKLILDAVQGDLI TYGQENPDADYYATNINFDEVGRPSFDLMMKNGDVEHFKLGVIGRHNINNAMASIIATYE NGIDINTIRENILKYTGLDRRMQIIGHVNKTTIMTDYGHHPSEILVTLDALKEHTKGRLI CVWQPHTYSRTKTLFNDFLNSFNSADEIIVTDIYAAREKFDPTIHSKDVVDAMVKKGLNA KYISTFEEARDYIYTIIKDDDLVITTGCGNPDKLAKMIVEDQKNLVNI >gi|229269866|gb|GG666045.1| GENE 284 285175 - 285525 475 116 aa, chain - ## HITS:1 COG:CAC0494 KEGG:ns NR:ns ## COG: CAC0494 COG2337 # Protein_GI_number: 15893785 # Func_class: T Signal transduction mechanisms # Function: Growth inhibitor # Organism: Clostridium acetobutylicum # 3 113 5 115 122 151 67.0 3e-37 MKVKRGDLYYADLSPVVGSEQGGVRPVIVVQNDVGNKYSPTIIVAPVTSQMNKAKLPTHV KLKGNKYGLPKNSVALMEQLRTIDKKRLREKIGTFSVDIMNKIDEAMTISLALAQD >gi|229269866|gb|GG666045.1| GENE 285 285515 - 286633 896 372 aa, chain - ## HITS:1 COG:BS_yncD KEGG:ns NR:ns ## COG: BS_yncD COG0787 # Protein_GI_number: 16078827 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Bacillus subtilis # 2 359 6 384 394 229 37.0 7e-60 MQETYLEVNIDKIRNNIIKIKNLNHRSKFCAVVKANAYGLGSDIVGREIEDLVDYFAVAR LSEGILLRRAGIKKPILILGYVGLDDISKCFENDIDISVYDLGLAKEIDKLGYKLKAHLV LDTGHGRIGFRADQIENIRQLKTLSNIKIISAFSHFSTADEEDNSFTEKQEEIFDYIIEQ IKNDFDLEFVHLANSAGTIRQKIFKDMYRIGICLYGLYPSEVVRDNTEIKLEKTFKLYSF VHFIKNIDKGTPISYGRTFVSSKPMKVATVAIGYADGYCRAFSNMGKVYINGYGCKVLGR VCMDQMMVDVTGLDVKIGDRVEIYKEIDKDANLIGTISYELMTNISMRVKRIYIKEGMVI ARRDYLGEIYES >gi|229269866|gb|GG666045.1| GENE 286 286636 - 287814 419 392 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|153833204|ref|ZP_01985871.1| ribosomal protein S15 [Vibrio harveyi HY01] # 117 390 233 508 512 166 38 2e-39 MIGIDIISVSKIKEKSDKFLRKIFTSNELSYAFKKENPYQTLAGIFALKEAVIKAYNLDI IYLKEAKIEVLHEKNRPYIYIDGEICECEVSISHDDGKAIAVCMNNEIPNLTIENEMRNI LPKRKKESHKGTYGKVAILGGSEGMSGSCFLSSTACLRAGAGLVYLLVPSSISKILQIKS CEPIINTIDSYNLKYNNYILDQIFGYLNDKDVLAIGPGMGTDPSLNKLIGNIINEFNGKI IIDADGLNAVAKDKSVLSKKNIILTPHLKEFSRLTGLSISEINKERIKIAKEFAKKYEII LVLKSENTLVTDGDKLYINKLGNPGMATAGSGDVLTGVISGLLPILNEFDAAKLGVYLHS LAGDLASSYLCEESLIASDIISYLPKAIRLLR >gi|229269866|gb|GG666045.1| GENE 287 287951 - 289369 1350 472 aa, chain - ## HITS:1 COG:TM1273 KEGG:ns NR:ns ## COG: TM1273 COG0064 # Protein_GI_number: 15644029 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Thermotoga maritima # 1 468 1 477 482 415 44.0 1e-115 MKTKTIIGLEIHVELSTDTKMFCSCKNEFGAVPNTNVCPICLGHPGTLPQMNKRAVEYAV MAGLAFNCKIRNEQKVDRKKYFYPDLVKGYQLTQFDKPYAYEGYLELASGKHINIREIHM EEDTGKSNHNDDDTVLMDYNRAGVPLIEIVTDPDISSPEEAREFVENLAATLKFLGVSDC IMAEGSMRVDVNVNIKDEELNLRTEIAEIKNINSIRAIENALSYEVERQTILLEEGKTGV KETRRWDDIELKTIHMRNKEVGNDYRFSADGDIPDIYLSDEFINHIREHLPELPSEKQAR YIKDYKLSEYDANLLSHDRNLANLFEETDRLVKDPNTTANWILTELSRRLNEADETAENM KLTVDNFAKLINLAKENKVNNNVAKKLLRDIYTTNEDPEKLAEERNLLQISDSSFLEDIV VEVLKENPQSIEDIKNGKDRAFGFLVGQAMKKTKGKGNPQEINKLLKEKIGE >gi|229269866|gb|GG666045.1| GENE 288 289359 - 290771 1456 470 aa, chain - ## HITS:1 COG:CAC2977 KEGG:ns NR:ns ## COG: CAC2977 COG0154 # Protein_GI_number: 15896230 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases # Organism: Clostridium acetobutylicum # 5 460 14 471 478 324 41.0 2e-88 MDIKAIIDKYKNREISVEENTKNILEKIKNDDTNAYITFDEEDSLKRAKLLDEKLASGAE LGSLFGIAVAVKDNISYKNMNMTCASKMLENFRPMFDAKVVENLLAEDAIIIAKTNMDEF AMGGRGKTSYFGPVKNPVDKTRLTGGSSSGSAAAVAKEDVLIALGTDTGGSVRCPASYCN ILGYKPTYSMVSRNGVVSMANTLDQVSVFGKNVADIRTIAQVIEGPDEHDMTVRLDDYKY EMDTYDFKGKKIAYIPSDDEMHMDIDSTVEKDYNSALDELKKLGADLSPINLKYSKYANP VYNVVMSSEVSSNMSRFDGIRFGYQSDKYTSVDELFINSRSEGLGEEVQRRIALGTMYLS ADDNQRVYRQGLKLRTLIKQELEEVFKTYDLIITPTVTNLPPSLDDDYQDPLSDFKSDGF NVIVNLSGMCGLSVPVRKGISGSVQFIANANEDSKLLNAGEEFLRRLNEN >gi|229269866|gb|GG666045.1| GENE 289 290780 - 291058 403 92 aa, chain - ## HITS:1 COG:no KEGG:Apre_0980 NR:ns ## KEGG: Apre_0980 # Name: not_defined # Def: glutamyl-tRNA(Gln) amidotransferase, C subunit # Organism: A.prevotii # Pathway: Aminoacyl-tRNA biosynthesis [PATH:apr00970]; Metabolic pathways [PATH:apr01100] # 1 92 1 92 92 110 65.0 2e-23 MDVKEVERIYNLSHLSLENQDKEVIANKFNRVLGFIEEIFEVDTKDVEMTEYIKNHKAVF REDTPKESLARSKALENAKDTEFGYFRLDWKL >gi|229269866|gb|GG666045.1| GENE 290 291060 - 293063 2037 667 aa, chain - ## HITS:1 COG:CAC2673 KEGG:ns NR:ns ## COG: CAC2673 COG0272 # Protein_GI_number: 15895931 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Clostridium acetobutylicum # 7 664 11 669 669 619 50.0 1e-177 MNKLDELKKIIERINELDYHYYTLDKPLVSDGEYDKLYNQLIKLQKNLAYVPENSPTNRV GGQILDKFEKHYHLTRLLSQDKAQSYDEIKEWIERCKRLKEAYESTSGERLPNLEFVMEY KFDGLTINLTYEDGILKTAATRGNGIVGEQVKAQAETIRSIPFTIKEKSLLEIQGEALMP LSELDRYNKENETQLKNARNAAAGAIRNLDTKETAKRHLTAYFYAVPTNSINFKNEEEML SFLKEMKLNVHPYHKKVTSLDEIINELERIKEERKTLDVLTDGVVIKINDKKTQEVLGVT EKFPRWSIAFKFEPEEFTTKLLDVIWNVGRTGKVTPSAILEPVDFSGVTVSRATLNNYDD IERKKVKIGSDVFIRRSNDVIPEILGVVDENQPGTIKIEKPTHCPYCHSELIQEKVHIVC PNSISCTPQLLARMEHYASRNAMDIEGLSEKTIGQLIEELSIKEIYDIYDLTYDELIKLE RFGHKKAKNLLASIDNSKNRDLDAFIYAIGIPNVGERTARDLANKFKSFDKLRNATVDEL IEIDDIGEITGENIVEFFHDKNIVESIDILLSKGINLNNPRENTSDSKKLDGINFVITGT IDGYNRDDIKKMLEDNGANVRGSVSKNTDIVLAGEKAGSKKDKAIELNVEIYEDEKLYSF LSELKGE >gi|229269866|gb|GG666045.1| GENE 291 293066 - 295261 1969 731 aa, chain - ## HITS:1 COG:BH0648 KEGG:ns NR:ns ## COG: BH0648 COG0210 # Protein_GI_number: 15613211 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Bacillus halodurans # 6 730 20 746 747 577 46.0 1e-164 MNLDRLNDRQKEAVLHKDGPLLVLAGAGSGKTSVLTSSIAYKIKEESVDPRNIIAITFTN KAANEMKERVSSLLDMDVAYLWIGTFHSICARILRMNIEKIGYSNNFTIYDTQDQRTLIR DIIKDLGYKDDINPRLAQSIISNAKNKSISPEDFLKMNFYMQNADEIAEIFKKYEKKKYE YNALDFDDLIEKVLELFVKDSETLRYYQNKFDYIFVDEFQDTNNSQYELIRFIAGKKQNV VAVGDADQSIYSFRGADIRNILSFEKDFKNTKIIKLEQNYRSTSKILETANVLIANNLER KEKNLWTENGDGADVLYKETSIESDESKFVIDTIKNLLADGYKESDMAILYRTNAQSRPF EEALLKNLIAYKVVGGLKFYDRKEIKDLIAYLNILVNSKDDVSLKRIINEPKRGIGDKSI DQIEKIAISHGISMLDLITDDNFSILMTDRLKNLTDKFYKPLEEIFINVDKYKIVDLINE VLEKTGYLRSLEKSLLVEDRARVDNINEFISSAADYQEANPEDDLRDYLENLSLLSDIDK TEENNESISLMTMHQAKGLEFPVVFIVGLDEGLFPSKRSLDEGNLEEERRLFYVGITRAE EKLFLTSAQMRRNYGKVTYYKPSRFIDEIKDLIKKETSREYIDYKSKSYEQAMNEDYMRE KTRQSVLDLKIKAFKKDDSTYQVGDTIEHSKWGRGMVVQVKESPEGNELVIAFDKKGLKK LNQAYAPIKKV >gi|229269866|gb|GG666045.1| GENE 292 295317 - 295634 454 105 aa, chain - ## HITS:1 COG:BS_yerC KEGG:ns NR:ns ## COG: BS_yerC COG4496 # Protein_GI_number: 16077726 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 2 105 1 104 104 105 57.0 2e-23 MMTESKLRTKEADELFEAILMLKDIEECYQFFTDICTAREIQSISQRLHVAKLLKIRKTY SVIEEETGASTATISRVNRSLNYGSGGYELVLDKLIEKDLKESKE >gi|229269866|gb|GG666045.1| GENE 293 295645 - 296217 620 190 aa, chain - ## HITS:1 COG:SP1590 KEGG:ns NR:ns ## COG: SP1590 COG3442 # Protein_GI_number: 15901432 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 186 37 221 260 204 56.0 8e-53 MAFEYELKRMGINSERKIVSLGDDFRASDYDFVFFGGGQDYEQNIVKDDLIKKRDELVNY IENDGLFLAICGGYQLLGKYYYGANGEKIEGLNIFDHYTLNQESKNRFTGQIKIYVKRFD ETCVGFENHGGRTFLSDNQTPFGQVIEGNGNNGEDNTEGFIYKNTIGTYLHGPILARNEN LCRKIIKIII >gi|229269866|gb|GG666045.1| GENE 294 296283 - 297605 1068 440 aa, chain - ## HITS:1 COG:SPy1035 KEGG:ns NR:ns ## COG: SPy1035 COG0769 # Protein_GI_number: 15675032 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pyogenes M1 GAS # 3 439 1 435 445 365 43.0 1e-100 MSLKSKLVKVLAKSIRSTLKLLNRKATSLPGYVAYKLDKDILKELSKNTKFIFVTGTNGK TMTTHFLATILKEHYPIVLTNESGSNMVQGIITSLLDNPPNEQTVAVLEVDEANIVRIGK YLKADYVALTNIFRDQMDRFGEIYNILDKIIEGLNLMPEARIIANGDLPIFSYDKLKKFN PIYFAIRDDDHIGYDRDAEFNSDGIICPSCHSILKYRTVNYSSLGDFACPNCDFKSPEIR YTIDKIASLDPNHSKFFIDGRAYEVNVGGVYNIYNALTALAVAYELGLSYDEIYKGLKKQ KNVFGRQENINVFDKNVVINLVKNPTGLNQVIDLVTLEKEPISLICLLNDNYADGLDVSW IYDSYYEKLSGLDIKDIYVSGKRKIDMKRRLEIANLFDGEIIEFDYVNQIKDVIKNAKTD NIYILSTYTAMLKLREVLAL >gi|229269866|gb|GG666045.1| GENE 295 297643 - 297912 318 89 aa, chain - ## HITS:1 COG:CAC2830 KEGG:ns NR:ns ## COG: CAC2830 COG1254 # Protein_GI_number: 15896085 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Clostridium acetobutylicum # 1 89 2 91 91 58 38.0 4e-09 MKRYHIIFKGRVQGVGFRFQVKILADRIGLTGSVRNLYDQSVEVYIQGNDNQLMRFFKGL ENINFAIIESKNIFEVPLDEAETSFEIVY >gi|229269866|gb|GG666045.1| GENE 296 298003 - 300519 2381 838 aa, chain + ## HITS:1 COG:CAC3655 KEGG:ns NR:ns ## COG: CAC3655 COG2217 # Protein_GI_number: 15896888 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 9 748 80 813 818 647 49.0 0 MKQRFDVYGMTCASCQAAVDRAVKKLGVDDVNVNLINETMSVNYDPNKISDEDIINAVSK AGYEARVKNMKKNKAKASDNLKEIEEENTKFRLKISFFFMAVLMYVAMGPMVGLPIPMFL AGTEGAINYAFVQFLLTIPVIFVNRKFFISGFKSLINKNPNMDALVGLGSSSALIYGIFV IMRMAHAAGRGDFATIDSYRHNLYFESSAMILTLITLGKFFEARSKGETKASLKNLMSLT PDRARVIRNNKEVEISTEDIVKDDIIIIRPGERIPVDGVIIEGSSIVDESAITGESIPIS KNIGDDVISATINIQGSFKFKATRVGEDTTLAQIISLVNEANETKAPIAKLADKISAIFV PAVILISIVTFIGWYSYTKNFEFALNLMISVLVISCPCALGLATPMAIMVATGKSAELGL LFKNAESLENLHKVDAILLDKTGTITEGRPVVTDLFTQMNEVSFLEIAASLEHLSEHPLS NAINAYAEEKNISLLSVEGFESLVGRGIKGIINNTIYYAGNLRLMEENNISINEYENIND RLAKDGKTSMYFANANEIIGLIAAKDIPKDTSKIAIDILKNENFEVTMVTGDNDLTAEAI RKSLNIDKKFAEILPQDKDKVVRTLQAENKKVAMVGDGINDAPALARADIGIAIGKGSDI AIDSADVVLVKNNLLDLVRSIDLSRATIKTIKENLFWAFFYNIILIPLAAGLLYPKFGLT LNPMFASVAMSFSSVFVCLNSLRLRKFELSANKYQNTKENIKENEMNEVKKMIVNVDGMS CNNCAKHVKNALEEINNVNSVIVNLDKKNAELTYEGNIDEKTIENAITEAGYEFKGIQ >gi|229269866|gb|GG666045.1| GENE 297 300524 - 300799 307 91 aa, chain + ## HITS:1 COG:CAC3656 KEGG:ns NR:ns ## COG: CAC3656 COG1937 # Protein_GI_number: 15896889 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 89 1 86 88 68 46.0 2e-12 MKADKKKTIRKLKTVGGQIDGLIKMIEDDRYCIDISNQVMASISILKNINKDVLRGHLEH CVYDSMKQKNEDDLKEKIDEIEKIIDKLNKI >gi|229269866|gb|GG666045.1| GENE 298 300847 - 301347 549 166 aa, chain - ## HITS:1 COG:CAC2413 KEGG:ns NR:ns ## COG: CAC2413 COG4708 # Protein_GI_number: 15895679 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 14 157 10 157 166 68 37.0 6e-12 MKEKYFSLDDTNFLVKSAVIAALYAVLTVMLPVASYGPIQFRFSEILVLLVFYNKRFIPG LVLGCAIANLFSPMMLFDVVFGTLSSYIAFMLMIKAKNLYIASIFPVLLVSIPAIGTWIY LASDEVFFVLLMQFMLSEFVMVSIIGVMLFKMLEKNEGFMSYIYNF >gi|229269866|gb|GG666045.1| GENE 299 301475 - 302350 728 291 aa, chain + ## HITS:1 COG:no KEGG:Apre_0991 NR:ns ## KEGG: Apre_0991 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 16 290 17 295 295 305 56.0 1e-81 MKKIFIVLISLLSLTSCSKKPNFDIKGFIDEESVKIIEDIKSLASDTFKRKNFLDFTYEV KPKKKSDVREDLIKNVEEAAKKDKKAQWVYDNFYNLDNVDAFLTGNDPDTIEFVYNKNHN FTDFNFYKGESVKLKRKTPYFIQWDNRWAYDALYPTNIGVSGCGPTSLAMIVSRMTNKLI YPNEMAKKASKFMNDGGMDWVFIDHIAKEYKLKVSDIILDKEKMIKALEEGPLLISVGRG YFTLYGHILVIDSYKDGKFLINDPNSVRNSIIEWDYDDISNQILKIWKFTK >gi|229269866|gb|GG666045.1| GENE 300 302678 - 303415 816 245 aa, chain + ## HITS:1 COG:CAC0331 KEGG:ns NR:ns ## COG: CAC0331 COG4684 # Protein_GI_number: 15893623 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 3 111 7 115 192 92 51.0 9e-19 MKLETKNLTTVGILGAIVIMLGLTPLGFIPLGMLSITSLHIPVIIAGILEGPIVGGLVGL IFGFFSLFNAMTRPGPISFVFYNPLISILPRILIGVVTGLFYKALKDKDNNRLRLFMNIF WSAIVIVLAYVTVKSFMTDVALINKIFSIIFLIIACVMLYLSVKNKKANFAIAVSSFMGT LTNSGLVLGLIYILYAQKYAEAIGISADLAAKAIFSAFVTNAIPEAIVAILVASAVVTSF SKRRR >gi|229269866|gb|GG666045.1| GENE 301 303454 - 303756 500 100 aa, chain - ## HITS:1 COG:no KEGG:Apre_0992 NR:ns ## KEGG: Apre_0992 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 100 1 100 100 72 46.0 6e-12 MDYNYLIKHTETYENYKELLVKVNEILDKLENDREDFDKLVEYYYSDQFQKDYDDSNEGK IDSSINQGILTEDAIYDLMGDDYYLALRFLNLANKMIQHQ >gi|229269866|gb|GG666045.1| GENE 302 303746 - 304672 931 308 aa, chain - ## HITS:1 COG:SMb20965 KEGG:ns NR:ns ## COG: SMb20965 COG1680 # Protein_GI_number: 16264838 # Func_class: V Defense mechanisms # Function: Beta-lactamase class C and other penicillin binding proteins # Organism: Sinorhizobium meliloti # 21 277 53 300 332 63 25.0 3e-10 MIDSILINKLEMNSLIIYSRDKGILFHDSKDEKINIRSLAKLVTSLACGILIDKSNGDFT EDTLIYDILKDKVNISNKKNLSKLKEIRVRDCLTHTMGYRDIILMSKDIGNLDKDRLLEY ALSYPLYSKPGEEFLYSNAGYYVLSAVMQEYLAYDLYNFINVNLFSKLGIINPCWDRYGN YLVGASKLYLCADELLKLGKIVIDDGVYDGERIVSSEWTRAISSRFYKNDKDYIDRTYLS DDYYGYGIWTGKDGVTYASGAGGQYLIFLKKEGIIIVACNAGDSNKVPAIKNQLDSIIKS LREEENGL >gi|229269866|gb|GG666045.1| GENE 303 304727 - 305167 631 146 aa, chain - ## HITS:1 COG:BS_yvaI KEGG:ns NR:ns ## COG: BS_yvaI COG0691 # Protein_GI_number: 16080413 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Bacillus subtilis # 2 145 7 151 156 146 56.0 1e-35 MKLLANNKKAFHDYFIEEKYEAGLELKGSEVKSIKAGKVSIKEAFISDKKGEMFVYGMHV TPYMEGFDKIDPTRTRKLLLHKKEINKLVGKKTVDGYTLVPLKVYENNGLVKIEIALAKG KKMYDKRESIKRKDDKRRMERALKNY >gi|229269866|gb|GG666045.1| GENE 304 305148 - 307268 1384 706 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15894003|ref|NP_347352.1| fused ribonuclease/ribosomal protein S1 [Clostridium acetobutylicum ATCC 824] # 1 697 1 701 730 537 40 1e-151 MNIKDLILNLIYDGDYIPMTLKELELYLKADKYTKAAVKDIIDELIKDNKIRISNKKRIL PLTEEELNLIGKISIASGGYGFFISNNRNFDDVYISKDKLNNAHNNDKVRIRIIRQKEKS KNAEGEVVEILEKANEELIGTYQANKNFGFVICDEKSQHEDIYVNKENSLGAKNGDKVVV EIITYPKSGNPEGKIIEIIGGKNDKNIDILSIVRQKKIPTDFSKQTKKELVFIEDQVNQN ELEGRTDLTKLFTVTIDGRDSKDFDDAISIEINGEDYDLYVHIADVSHYVKKHTALDDDA YERGNSTYLYNIVIPMLPEKLSNGICSLNPGEIRLSLTAKMTIDKKGKVIDNNFYKAYIK SDKRLVYDDVNDFLEGDKDVFDDSVLKEKLGLFDELYKILKKSRENRGSIDFNFEESQID VSETGEVLNIEALERGPGNKMIEEFMLIANETVASLFAYMDFPFIYRIHEKPSEEKLDGF KRALNAMGYNIKGNDLHPKDFQNILKEVEGKKEEKIINMLMLRTMKKARYANYNDIHFGL STKFYTHFTAPIRRYPDLIVHRILKFFIENKLNKINQTSLESNLEEAADHLSITERRSED AERAVEDLMKCKYMTRFIGEVFEGRISSITEFGMFIELENTVEGLFMYKFSDHRYDFIED SLRAFDVDTKIYYNIGQEVKIRVVNVDLVKREIDFYLEDEDEIISQ >gi|229269866|gb|GG666045.1| GENE 305 307321 - 307548 260 75 aa, chain - ## HITS:1 COG:no KEGG:Apre_0769 NR:ns ## KEGG: Apre_0769 # Name: not_defined # Def: preprotein translocase, SecG subunit # Organism: A.prevotii # Pathway: Protein export [PATH:apr03060]; Bacterial secretion system [PATH:apr03070] # 1 75 1 75 75 85 76.0 6e-16 MSNFLAVIMMIASAIVIVAVTLQDPKTDGLGALSGTQTNVFGKSAHKSKNEMLDKVVIFG GVLLFLGSIIFIAIN >gi|229269866|gb|GG666045.1| GENE 306 307659 - 308951 1985 430 aa, chain - ## HITS:1 COG:BS_eno KEGG:ns NR:ns ## COG: BS_eno COG0148 # Protein_GI_number: 16080443 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Bacillus subtilis # 1 429 1 428 430 627 75.0 1e-179 MSLITSVYARQILDSRGNPTVEVEVETELGGFGRAAVPSGASTGEWEAVELRDGDKNYYL GKSVLKAVENVNEIIAEELEYNFDVTDQIGVDNAMIELDGTENKGKLGANAILGVSLAVA KAAADELGMPLYNYIGGTNAKLLPTPMMNILNGGEHADNSVDIQEFMIFPLGADSFAHAL QMGTEVFHSLKSVLSSKGYNTAVGDEGGFAPNLKSNEEALEIICEAIKAAGYEPGKDVYI AMDCASSEFYNKEDGKYHLDGEGTVKTEDEMIDWLEQLVNKYPIISIEDGLDENDWEGWA KLTQRLGKKVQLVGDDLFVTNTKKLSKGIAEGVANAILIKVNQIGTLTETLNAIEMAKEA GYTAIVSHRSGETEDTTIADLVVGVNAGQIKTGAPSRTDRVAKYNQLLRIEDELWDDARF KGLDALYNLK >gi|229269866|gb|GG666045.1| GENE 307 308964 - 309716 1041 250 aa, chain - ## HITS:1 COG:BH3558 KEGG:ns NR:ns ## COG: BH3558 COG0149 # Protein_GI_number: 15616120 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Bacillus halodurans # 1 246 1 247 251 267 53.0 2e-71 MRKPVIVGNWKMNKTPSEARVLLEEIKALDLDSSVEAGFCVPAIDLLVAQEVLEGTNINY GAENMYFEESGAFTGEISPLMLKDVKAKYVIIGHSERREYFKECDCLVNKKVKSALAHDL VPILCVGETLEEREENKHEAKVKDQLTKNLKDVSEADVEKVIIAYEPIWAIGTGKTASAE DADSMCGFIRNFIKESYCENASEKIRIQYGGSMKPSNVKELLAKENIDGGLIGGASLKAS DFEQLVNFKK >gi|229269866|gb|GG666045.1| GENE 308 309727 - 310923 1723 398 aa, chain - ## HITS:1 COG:TM0689_1 KEGG:ns NR:ns ## COG: TM0689_1 COG0126 # Protein_GI_number: 15643452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Thermotoga maritima # 1 398 1 397 399 431 60.0 1e-121 MNKKTVKDLDVRGKKVLVRVDFNVPLSKEEKGKIADDARIKAALPTINYLSENGAKVILM SHLGRPKGEANPDFSLKPVADYLKNEYKDKFAFIPSDEVVDEKVKEEVNKLADGQIALLE NTRYRKEETKNGEDFAKELASLADLYVNDAFGTSHRAHASNVGVASILPSAVGFLIEKEI EVMGKALEAPDHPFVSILGGAKVSDKIGVIENLITKVDTILIGGGMAYTFLKAMGKEIGK SLLEEDKMDLSLELIEKAKANGVEILLPVDVVIADKIEAGVDTEIVDIDDIPVDKEALDI GPKTAKLFAEKIKAAKTVVWNGPMGVFEIKEFSNGTNEVAKALADSDAVTIVGGGDSALA IEMAGLKDKITHVSTGGGASLEFLEGKALPGITAIEDK >gi|229269866|gb|GG666045.1| GENE 309 310973 - 311980 1341 335 aa, chain - ## HITS:1 COG:NMB2159 KEGG:ns NR:ns ## COG: NMB2159 COG0057 # Protein_GI_number: 15677972 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Neisseria meningitidis MC58 # 1 333 1 331 334 416 63.0 1e-116 MTTRVAINGFGRIGRLTLRRIAAVEDNIEVVAINDLIDKEGLLYAFKYDTAQGRFDGEAE LTEDGFKINGKEIKVFAERNPEDLPWKELNVDIVLECTGFFTEKEKAEAHIKAGARKVLI SAPGKGDMKTIVFGVNHEILDGSETVVSGASCTTNCLSPMVNVLLKEFGFVSGQMSTIHA YTATQAIQDTPASKKDLRGGRAAAQNTIPASTGAAKAVGKVLPEVEGKIDGSALRVPTIT GSITELYSVLEKKVTVEEVNAAMKKYSNDAFAYETDDIVSSDIIGYPAGSIFDSQLTKIV EGANGTQVVKTVAWYDNEMGYVSNLVRTLDYLANL >gi|229269866|gb|GG666045.1| GENE 310 312048 - 312974 507 308 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 1 305 1 305 306 199 38 1e-49 MYDIIIIGGGPAGLTAGLYAGRSKLKTLIIEKDIAGGQISGTAYVENYPGSIENPTGMAL SERMEEQAKQYADFVFEKVEEVKLDGEIKTVKTDSNEYQAKVIIISTGARHRKLDVKGEE EFANRGVSYCATCDGPFYQGLDIYVVGGGDSALEEANYLTRYGKSVTIIHRRDEFRASGV VVENVKNNPKIMFEYNSVVKEIRGDKEVEELVLENVKTKEEKVIKNEDGSPIGVFVFVGN IAQTELFKDMLKMENGYILTDDDMKTDIEGVFAVGDTRKKSVRQAVTAASDGCVAAVMAN RYLESKSW >gi|229269866|gb|GG666045.1| GENE 311 313439 - 314281 698 280 aa, chain - ## HITS:1 COG:lin0298 KEGG:ns NR:ns ## COG: lin0298 COG0561 # Protein_GI_number: 16799375 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 275 1 269 270 113 30.0 4e-25 MIKLFAFDIDGTLLDNKSLLTNASKKAIGKLQEAGIKVVLASGRVFPSIQFHQKLLGIDG PIVATNGSLISLDGKEVYKSYHIDDDLLNSLYDFCLKHELEFHFYDEENYYTNRLNLDRI KHLFINNDYGMNYQVDLIIKKDPVSYMINNSKKAVKFQISGIDEKEISKQEILSLLKQEF GDKLYMTASGDSIIEIGNKDATKWSSIEEICQLLGIYQSEVAAIGDAYNDIPMVKGAGLG FAMGNAKDDLKKVADVVVADNESNGILEAVNYVLEANKNV >gi|229269866|gb|GG666045.1| GENE 312 314274 - 314867 472 197 aa, chain - ## HITS:1 COG:CAC0689 KEGG:ns NR:ns ## COG: CAC0689 COG0177 # Protein_GI_number: 15893977 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Clostridium acetobutylicum # 1 196 16 210 211 219 55.0 4e-57 MYPDVDHSMLNFTTPFELLVATILSAQATDISVNKVTKEMFKVANTPEDFANMDIKELEN HIRTIGIYRNKAKNIKAASKILIEDYNSIVPADKKELQKLPGVGRKTANVVCANAFGIPS IAVDTHVFRVANRIGLADANNVDKTQDQLEKRLDKSRWSKTHHQLITHGRVLCKARNPLC EECLINKLCIYYRRSHD >gi|229269866|gb|GG666045.1| GENE 313 315020 - 316186 1120 388 aa, chain + ## HITS:1 COG:CAC1251 KEGG:ns NR:ns ## COG: CAC1251 COG0772 # Protein_GI_number: 15894533 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Clostridium acetobutylicum # 2 363 6 370 373 197 37.0 3e-50 MFNLKKKNFKDFDILLLISTLALSIFGLIVLYSAYGGKIGSIKTQIFSTILGFILIAIIC TLDLDVVKKPYKIYYAGMIGLLLITLVIGRGLDEWGARSWIYIGSFSFQPAEISKIILII TLAAFLDKYKYAINTPLVLVKTIIFVGLPIGLILMQPDFGTSMVYVFFIAAMIFIAGLSW KWIGILSVAGLALGIFLLANLKGFRADRIENFLNPSRDTSGSNWQQQQGMIAIGSGMLNG RGYLNGSQSQYGYIPEKETDFIFSVLAEELGFIGAIIMIALFTILIFRLINIAKSSNNTF ISLLVTGIAGLIFIHIFENVGMTIGIMPVTGIPLPFFSNGGTFQLLILVCIGFALSASMQ KNQYDNGIIDYETIMPLEVSMVRPSKRK >gi|229269866|gb|GG666045.1| GENE 314 316365 - 316991 675 208 aa, chain - ## HITS:1 COG:PH1972 KEGG:ns NR:ns ## COG: PH1972 COG1394 # Protein_GI_number: 14591709 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit D # Organism: Pyrococcus horikoshii # 8 201 10 206 214 70 29.0 3e-12 MNSEQIASKANLIKAKEELKLLDVGLDILDKKRKALMNAHESKIKDRDSLNKKVNQTMND VSHSFNKAMASIGQAKLESLAGLIPIDNSIETKNTKFMQTDMAEVSFNPKKLSLSYSFYQ TNSLFDEALIAFNKLRADIFKLAELDSTINNLEIEIRKSNKKVNSLEKIQIPQKTELIKN ISQSIEEKEREEFSKTKIVKSNKAKKSS >gi|229269866|gb|GG666045.1| GENE 315 316984 - 318357 1663 457 aa, chain - ## HITS:1 COG:TP0528 KEGG:ns NR:ns ## COG: TP0528 COG1156 # Protein_GI_number: 15639518 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit B # Organism: Treponema pallidum # 5 452 6 455 480 513 54.0 1e-145 MRKEYTKIKKIESSIIEIEKVTDIAYNALVSVHAAGMEFVGSVVMVDDDTVTVEVYANTD NFSVEDIVVSFYERPLELPLNETILGRTFNGIGEPIDNGGDIYADETYPVEGLALNPVAR EYPRDFIQTGISAIDTLTTLIRGQKLPIFSGSGLPHNEIAAQIIRQAKLKTNEDFAFVFA AMGIKKDEAMFFEDAFSKAGVKDKLVMYQNLADSPIMERLLAPKCALTAAEYLAYKKGYH VLVIITDMTSYCEALREVSSIRGEIPSRKGYPGYLYSNLASLYERAGMIEGVKGSVTLIP ILTMPNDDITHPVADLTGYITEGQIVIDRGLSSKGVYPPINVLPSLSRLMKDGIGEGYTR ADHEDVMNQLYESYSKVIDVRNIAQIVGEDDLSAVDKKYLEFGDVFESKFLSQAQSENRE LEESLDLAWDILKILPRNELHRVSEKNLDKFIGKADE >gi|229269866|gb|GG666045.1| GENE 316 318361 - 320103 1792 580 aa, chain - ## HITS:1 COG:MK1017 KEGG:ns NR:ns ## COG: MK1017 COG1155 # Protein_GI_number: 20094453 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit A # Organism: Methanopyrus kandleri AV19 # 5 578 9 587 592 602 53.0 1e-172 MNPIIKTINGPVVYAQNARNLKIREMVSVGNLKLIGEVISVEGDLATIQVYEDTSGLKVG EDIISTSMPLSVRLGPGLLGNMFDGIERPLKHIMDKHGAFIPSGIGFDNLDLEKEWDVKI KFKKGDKIRKADIYATIKETEVIEHRLMSSFDGEIIEAKEDGKYKLEDTILKVENDEGVY ELKLYQYWPVRNPRPVKKALSLKNLLVTGQRVLDVFFPIAKGGTVAIPGGFGTGKTMLQH QLAQYSDVDIIVYIGCGERGNEMTQVLEEFPDLIDPNTGKDLMQRTILIANTSNMPVAAR EASIYTGITIAEYYKDMGYDVALMADSTSRWAEALREISARLEEIPAEEGYPAYLASRLS KFYERAGYFENLNGTKGSVTLIGAVSPSGGDFSEPVTEATRRSVNVFLGLDRKLAYSRHY PAINWLTSYTNYLEKMQDYYKEHYNSDIISIRNKLMNVLISEEEVKSIMMLVGSDALSDE QKNILDVAALIRNGFLQQNAYNAVDKYVPVDKQIMMLDIIDKYNNLSEQALKDGISYKKI YNSDLLNEISQMKYNVENDKLEKLNQLGSKIENYFANLRG >gi|229269866|gb|GG666045.1| GENE 317 320087 - 320692 561 201 aa, chain - ## HITS:1 COG:no KEGG:Apre_1012 NR:ns ## KEGG: Apre_1012 # Name: not_defined # Def: H+transporting two-sector ATPase E subunit # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 1 201 1 201 201 143 50.0 4e-33 MLDLEAKLSSFRKMVWDEEKLKTDNELFLSTEKNSSYIDDKNKQRNKEFEEKIKDRKNFL KIRKNEEISKIKQEEKNDFYAYREELLYDFYNRLITKLRAYKKTDAYKKSLQEDIKKMMK ALNLSEDEIVVCVLQDDLDLIDFKNKQAIDKTYIGGFILKDINNEFRYNFSYKERIRDRK YEFGKKLYQVLESERFNESNN >gi|229269866|gb|GG666045.1| GENE 318 320704 - 320940 201 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485045|ref|ZP_03915361.1| ## NR: gi|227485045|ref|ZP_03915361.1| hypothetical protein HMPREF0072_0448 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0448 [Anaerococcus lactolyticus ATCC 51172] # 1 78 1 78 78 134 100.0 2e-30 MKAKILTDSNSLLTMFRLGAIEASLVGDQNFEVEFKNSYKDENLAILIITRSVYNKNMNR IDNYRRDYSMPLIVIIDG >gi|229269866|gb|GG666045.1| GENE 319 320942 - 321373 718 143 aa, chain - ## HITS:1 COG:no KEGG:Apre_1014 NR:ns ## KEGG: Apre_1014 # Name: not_defined # Def: H+transporting two-sector ATPase C subunit # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 1 143 1 142 142 152 82.0 6e-36 MIKYTALLALAVVIITIYSGLYLLKNNEDPSKSKIRKALKMNLFTFVPVMLMIVVLMIPT GSKAAETAATAAAASDGLKYIGAALSTGLAAIGTGYAVGTVGSAALGAISEDQSILGRTI IFVGLAEGIAIFGVIISIMILNA >gi|229269866|gb|GG666045.1| GENE 320 321385 - 322746 1412 453 aa, chain - ## HITS:1 COG:Ta0008 KEGG:ns NR:ns ## COG: Ta0008 COG1269 # Protein_GI_number: 16081193 # Func_class: C Energy production and conversion # Function: Archaeal/vacuolar-type H+-ATPase subunit I # Organism: Thermoplasma acidophilum # 9 453 163 624 637 127 24.0 4e-29 MTDKIKNSKENYLLVYPKQVSEDIGRAVNTMGFIDKKLPDENLDSIESKLSEVNQELDSL ENEIENFKKNNEETFESLPSTVEYYEKSEDIISKMAKGEKYLYLTGWVPNSKVKEFENLS KKYDKTNVEVKKKYNQEPPTKLRNNKLFRPFEFLVNMYGAPNYNEIDPTPFFAVSYMLLY GMMFGDLGQGLVFVLLSFLVDKKDKTFGALIRRVGFSACFFGLMYGSVFGIETLIPAILI KPFDNIMKVLIASVAFGIGLLVIAYCMGIYNKLVKQNNIEEGIFGKEGIAGLMMMISFVL IILNIVKVNPMPISVGFALLIASIVMIVFSKPIAAKIEKRDEIFESSAFDYYVESSFSII EALLSVFSNLVSFTRVGAFAINHVGLYMAFEVMSKIAGGGIKGLIILILGNILIIGLEGM IVFIQGLRLEFYEMFSKYYQGNGRKFRPVKERK >gi|229269866|gb|GG666045.1| GENE 321 322736 - 323629 855 297 aa, chain - ## HITS:1 COG:no KEGG:Apre_1016 NR:ns ## KEGG: Apre_1016 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 291 1 290 294 193 45.0 8e-48 MAVEKMNLVNITSRLENLTDLLKDVINIGQIEPIDAFGQVASRAFSVKASSENVELTEDM NNITSFHGLSKEELEKLNYLKRFFDISDDEEVGEISKVISKDELERLYTRLEPMIKRREE LVEEKDKLLTYKNNLEILTKANVDIEKIKHLNYFDFRYGDVTKDGRFILKNNYENIPSLI IHLDDEAVKSADALNTLIELDNKTSQRRKSVDEIIENEKSESLRVANKIDQTFFEKLSSE VANLNANNDEKIKKEAEEIKNSFSDRKNHIESLYKEKVDLLVDNAFNKIIEGDGNDR >gi|229269866|gb|GG666045.1| GENE 322 323632 - 324612 755 326 aa, chain - ## HITS:1 COG:no KEGG:Apre_1017 NR:ns ## KEGG: Apre_1017 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: Oxidative phosphorylation [PATH:apr00190]; Methane metabolism [PATH:apr00680]; Metabolic pathways [PATH:apr01100] # 1 326 1 326 326 246 48.0 1e-63 MKDVSVKAKAKLGKLLDDYLLERTINENDLARKISYLKKNYEFLDENDNKLVIEEKLYNH FYKQEKSIEFFLRGLEKKFYQLYFSIYKIYLIQEIITSILNKSLEDNYKYFINSPFFEGM ELLPNFSLNDFVNSIKDNHIKRVLEPFLNENMDQDELIFLSSNALIKLYYRALLKISEKF PNSEYKHINKYLAEEINLLNFEMLYRLKSFFEINNNEVFNYLIEGGYLFNAERLREISNL NKEEFIEYFSDGRYKNIFEDENLVYKRIQDKRWKNSRDEIINDNCDILYVVSAINLLYLD IKNIVSILEMDEKYDYNQKRELLIGR >gi|229269866|gb|GG666045.1| GENE 323 324749 - 326104 450 451 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229233241|ref|ZP_04357664.1| SSU ribosomal protein S12P methylthiotransferase [Chitinophaga pinensis DSM 2588] # 1 450 1 435 435 177 28 4e-43 MVSKKLEKYKDYFKGKTYNITTFGCQMNEHDSERISYILEDLGYVYEEDRKKADFILFNT CLVRENAELKLYGQVSSLKKIKESHPEKIIAVSGCMMQTEVARQVIIDKHREVDIIFGTK NINSLSDLIFRYLETGERVVDISTDNVKDDFVKYNTPNHFQAYVNIMTGCDNFCSYCIVP ESRGREESRRPSSIIEEVEYLVNQGYKEITLLGQNVNSYGNKADFNHTFPELLEKVAQIP NLKRLRFTTSHPKDLSDELIKVIKRNDNICKYFHLPLQSGSDKVLKDMNRKYTQEKYLER ARKLKEEIPEIAISTDIIVGYPTETEEDFEQTLKVCKEVGYDTAFTFKYSPRPKTRAAKL TPIDDDIVQARFDKLLDLLYPIFNEKNQTYIGKTVEVLLESESKNNPEVLTGRTDDYKLV HVKADKSLIGEFVKVKITGNTSFTISGDLVE >gi|229269866|gb|GG666045.1| GENE 324 326161 - 328230 2862 689 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002590|ref|ZP_04049584.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SSU ribosomal protein S1P [Anaerococcus prevotii DSM 20548] # 1 686 1 686 686 1107 80 0.0 MEIIIAENSGFCFGVKRSVELAEKALDSNKTVYCLGPLIHNPQLVESFSKRGLTVIDHDE ALNIKDSLIVIRAHGEDKNFKDKLIENGNELYDATCPVLNSIYKKIIQKEKDGYQVIIVG DNTHPEIIAMDSCIKHGIVVKDETEAKNIKNYDKLYVVSQTTNRLEFFRNIANKLEENND SVVIENTICNATKLRQDSAKKLASQVDCMIVVGGFNSSNTNKLYQVASMFCKNVFRIETV KDLPLQKLSKFKKLGIIAGASTPESIIEEVVSSMDEFTKEEFMNSLENSLRKIYPKEVIT GTVINVKDDEVFVDIQYRADGIVKLDEMTEEEQKDPKNSFEVGADIDVYVIKLDDGEGNV SLSTRRVEGMKAWKELSDKFENEELVHGKVISFNKGGLTVEVNGVNGFVPASQIATYFVK NLKKFVGEEWDLKIISIDERKNRLVLSRKDVLEAELDDLWDELEEGQVVKGKVARLTDFG AFVEVNGLDGLLHVSDIAWTRVEHPSDVLNVGDEIEVKILKLNKEKNRISLGRKQLIEKP FEKFVNEHQVGDVVEGKVVNLLDFGAFVEVADGVEGLVHVSEISWDHVEKPSDELNVGDT IEVKIISIDKDEEKVGLSIKALKEAPERPERKPRPQAKTNDKPRRKVERDNSIAFGDDDL NNNLGDMLAQALSAQGSDDLLGSIEEDAE >gi|229269866|gb|GG666045.1| GENE 325 328211 - 328822 502 203 aa, chain - ## HITS:1 COG:BH1635 KEGG:ns NR:ns ## COG: BH1635 COG0204 # Protein_GI_number: 15614198 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Bacillus halodurans # 3 178 4 181 195 131 38.0 9e-31 MFYRVVVAILRVLFFPFYRVRVHGRENIPEKADIIACANHWSNLDPFFLALNLPIKFNFM AKKELFEIPVLRNILKAAGVFPIDRKGNDLKALRYAIGLIKDGKTLGIFPEGTRVKKISR ENMHEGIGFIALKAKSDILPIEIVTSYKLFSSVDIYVKEPIAIEKYADIKNKEAMKMISD EVFYAIYDHRDIIESEKNGNNNC >gi|229269866|gb|GG666045.1| GENE 326 328812 - 329465 279 217 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|15639271|ref|NP_218720.1| bifunctional cytidylate kinase/ribosomal protein S1 [Treponema pallidum subsp. pallidum str. Nichols] # 2 207 34 279 863 112 31 3e-23 MTYIIAIDGPSGSGKSTVSEILAKKLNIEYLNTGLMYRAVTKYFLDKGFGENTDDKILKY LLDEITIDFRDNKLFLNDEDVTDRLRNDQVTANVSWVSARDYVREKMVDLQRKIAENTSF ILDGRDIGSVVFPDAKYKFYLTASALTRAKRRFDQGESDMTIEEIEKAIIKRDDYDSNRK VSPLKVAEGAIVVDSSNLNIDQTVNKILSLMGKNDVL >gi|229269866|gb|GG666045.1| GENE 327 329462 - 330676 894 404 aa, chain - ## HITS:1 COG:CAC1849 KEGG:ns NR:ns ## COG: CAC1849 COG2081 # Protein_GI_number: 15895124 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 14 400 1 391 393 251 37.0 1e-66 MKKIGIIGAGPAGLMAAIRAKNENNIVTVFETNEKIGKKLLMTGGGRCNITNAAYYQDFL DNVVTNKKFIYSAFTNFDNFSMIDFLNKNGIETIIEEDGRVFPKSEKAIDIVKFFEAKLK EKSINLITNTKINKVYKDKNFYLTDQNGKTYEFDYLIIATGGKSYPKTGSDGIGYKLARK LGHEIIEPKAVLVPIFIKDKINFKAQSFRNIKINILTDKDNVSVEGDLLINANFLTGPAA LKASSYMRDKKISKVSIDFYPNLTYNDLDKQILNLLGENSKKSVGNALKTLLNPSLLDEI FRRNNLNLGKKSSEFTKEDRKSLIEKIKDFDLEFDRLGSFESAVVTRGGIDVTKLNPKNM QSKLVEGLFFAGEILDIDCLTGGFNLQICFSTAYSAGTYIKENT >gi|229269866|gb|GG666045.1| GENE 328 330704 - 331399 775 231 aa, chain - ## HITS:1 COG:TM0264 KEGG:ns NR:ns ## COG: TM0264 COG1187 # Protein_GI_number: 15643034 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Thermotoga maritima # 1 228 1 228 239 169 40.0 3e-42 MRINKFIAHAGYTSRRKADELILKGKVKINDEVILEPGIDVCDDDRVEVEGKVLSIEKKF YIKLYKPVGFITSNFDPYNEKDLNELVDIDKRFFAAGRLDKDSEGLLIITNDGEFTNNLI HPKYKLDKEYIVKVDKKLKDYQEKQFAQGLDIGNGEKTSDAKIEYLENNTYRVIIHQGYN RQIRRMFKVFGIKVVSLKRIRIGKISLSNLKEKEYRYFNEDELKFVEEIRR >gi|229269866|gb|GG666045.1| GENE 329 331389 - 331913 410 174 aa, chain - ## HITS:1 COG:CAC2060 KEGG:ns NR:ns ## COG: CAC2060 COG1386 # Protein_GI_number: 15895330 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Clostridium acetobutylicum # 7 165 21 179 202 117 43.0 1e-26 MTEDYLKGLIEEVLYIWAEPISIDEISKILYDLPKADIKKCLDEMIDERKDRQTGLVIRN FNNSFQFTTRKASDKYFESLLSKSDKKLTNSTLETLSIIAYKQPITRVEIDKIRGVNSQS TIDSLLEKKLITEKGRLDKIGKPIIYGTTDNFLQYFNLNSLDDLPEIRIEKNED >gi|229269866|gb|GG666045.1| GENE 330 331910 - 332608 424 232 aa, chain - ## HITS:1 COG:CAC2061 KEGG:ns NR:ns ## COG: CAC2061 COG1354 # Protein_GI_number: 15895331 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 228 1 240 249 84 33.0 1e-16 MKLNIKLEDFEGPFELLLKLIDREKIDIYDVKIEEITAPFLEEMAKMDIDISMLSEFIYT SSILLTIKANKLLPKPENEGLEEDFLSYLIEYKKIKSVQDDFKFLEDEARKIHSKYQEDL STYQKDNLIISQDVDILSNEFSKLLRRLAIEKKSEEKIFEQVKIPDVNSYLISLRKTLNF SKELNLVDITKRINSKAECIATFLALLEMVRLNEIYIKQIEMNSFKIIKRVK >gi|229269866|gb|GG666045.1| GENE 331 332598 - 333146 569 182 aa, chain - ## HITS:1 COG:TM1181 KEGG:ns NR:ns ## COG: TM1181 COG0494 # Protein_GI_number: 15643937 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Thermotoga maritima # 5 172 2 168 179 130 43.0 1e-30 MNEEKFYEKTIKSDTIYDGKILKLRVETVELENKRYSKREIVDHQKGVGIIAFDGPDKIW MVRQYRKAIDKVTLEIPAGLVDPGELPIETAKRELQEEVGFFPQKVTYLFDMHASPGFTN DKLSFFVAEDLLESPLDLDEDENLMSKSYLLTDLYQMIENGEITDAKTIIAIFYALRRIN EA >gi|229269866|gb|GG666045.1| GENE 332 333139 - 334827 1336 562 aa, chain - ## HITS:1 COG:BH2776 KEGG:ns NR:ns ## COG: BH2776 COG0497 # Protein_GI_number: 15615339 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Bacillus halodurans # 1 560 1 562 565 284 32.0 4e-76 MLAELYIDNFIIIKKDHIFFEDKFNVLTGETGSGKSIILEAINLLSGKRASKDIIGNFKD QSIIEAVFLLKDDLIQKLTNLGISFDDDKLIITRNIGKNSSSIRINGRLSNINILKEISD DLIDVYKQGDSNIYMNKANYVDLIDSYQNDGKTKDIRSKLASLFKEKNDYLRRFKDFDLS DEELSRERDLLNYQIDEIDSIDLFNLDEEEIESEYKRLTNISSLKDGYYRMLELLDSSDY EMTSASKLLNEAVSNISDFITIDKKSSDLYNRLVALSDELDDIYSQADSYVDFLSTDPEK LETLEDLNKKLFDLKRKYGNNIDDIKAYYDSMKERLSELDQIDDLRNNLTNILLEIDNKM MRYSEEIHEIRINKIKSLEKSLNKEIVELNIKNGKFKVDVKKKEKIDKTGFDDVDFLIRT NKGESLTSLTKTASGGEISRIMLAFKEVFASFDEIDTMIFDEIDTGISGRTAQIVGEKIL DLSKKRQIIAISHLPQIASLANNHILISKEDDGNYTISSSKNIKEDERTLEIARLIGGVD ITQTTIKSAREILKMAEDLRNE >gi|229269866|gb|GG666045.1| GENE 333 334827 - 335279 448 150 aa, chain - ## HITS:1 COG:CAC2074 KEGG:ns NR:ns ## COG: CAC2074 COG1438 # Protein_GI_number: 15895344 # Func_class: K Transcription # Function: Arginine repressor # Organism: Clostridium acetobutylicum # 3 149 2 148 150 91 36.0 5e-19 MKKYTRQRLILDIIQNNDVRTQSQLSEILKSQGVNATQATISRDIKELRISKVQSDDYEY KYTVVDAVYDTLTERIEKIFKEAVLSVEISAQLIVIKTISYCATVCGQYITNAKLDNVGG MVTGIDTIFITPKDFESIENLVEDIRALVK >gi|229269866|gb|GG666045.1| GENE 334 335288 - 336115 779 275 aa, chain - ## HITS:1 COG:CAC2080 KEGG:ns NR:ns ## COG: CAC2080 COG0142 # Protein_GI_number: 15895350 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Clostridium acetobutylicum # 12 221 1 220 289 135 39.0 8e-32 MNKEKFLESLSLDKKIIDREIQSYFNPKNKLEEAMVYATDGGKRIRAFLYLETKKMFSQN ISELDYKLAMSIEFIHAYSLVHDDLPAMDDDDYRRGQESVHKKFGEDIGILTGDALLNEA ALILFDIGIKDSSYLKASSYILERASRFGMIEGQVMDLRRESTYDLSYLLEVYKKKTSDL FKAACLAAALTSNQTEYTYRKIEVFAENLGLAFQIQDDLLEDTYKDELNILNVMEKQDAI KLLDEVNNKARNSIRDFKNNEVLSYLIDYLSSRSY >gi|229269866|gb|GG666045.1| GENE 335 336108 - 336293 336 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485062|ref|ZP_03915378.1| ## NR: gi|227485062|ref|ZP_03915378.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 67 100.0 2e-10 MDKSFEDQYKKIEEILDEIENNKDNLDEAIKLYDKAKNMYKDLEEKLEDFRAKVEVIGND E >gi|229269866|gb|GG666045.1| GENE 336 336286 - 337470 910 394 aa, chain - ## HITS:1 COG:TM1768 KEGG:ns NR:ns ## COG: TM1768 COG1570 # Protein_GI_number: 15644513 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Thermotoga maritima # 6 392 7 393 394 181 29.0 2e-45 MRKPLSVKQFNEYIKSNIKHDPIFQRINLIGELCNIRINNYHLYFSLKEGNDLIDVVIYY YEDKEINFDFSPGKEVIIKGNLSFNNYSSKLVIIVNEVEDVGISKEFLEFLKMKEEFKSK GYFDKENKKPIPKLVKKIGLITSKDGAAIMDFLAMINSKANDIHIYLDPVKVQGDDAEVL IANAIRTLDNLSLDVIVITRGGGSNEDLSSFNKRKIIEAVFAAKTPIISAIGHNIDTTLI DYTSDLSLQTPTEVGSYLISDYVDYEKKIINKFDKAESLIKNTIVMTELKLKVLDAKIKK SSPAKLTEDKINALSSLNQEINKAIKNVFSYNENKFKNLAIKLDYVEKLIDVRKQHFEIK FDEKNVYSSHSLTEGDQIELIFVDGKLKARIING >gi|229269866|gb|GG666045.1| GENE 337 337467 - 337853 318 128 aa, chain - ## HITS:1 COG:no KEGG:Apre_1032 NR:ns ## KEGG: Apre_1032 # Name: not_defined # Def: NusB antitermination factor # Organism: A.prevotii # Pathway: not_defined # 1 128 1 127 127 123 59.0 2e-27 MKRTDQREWVFKLIFQDTINKIEDTKDLLSNHKLNEDETFIVESINSYKKNFEKIDKILQ DNAPKGMPKLSRVVKSIIYLSINEIYFLDIPVSVSINEAVNIAKKFSNEDDYKIVNLILG NIVRNENK >gi|229269866|gb|GG666045.1| GENE 338 337853 - 338182 475 109 aa, chain - ## HITS:1 COG:no KEGG:Apre_1033 NR:ns ## KEGG: Apre_1033 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 109 1 108 108 97 57.0 2e-19 MSSNFKDGSVKIADEVLDQIAIQAANDVYGVYEENSDEGFIHSLGTRTNKSSIRNVDGHL VIDLDLSLDKNVNVRKTVKKIQENVKNVVETMTGLNVSKINVNIIKLEI >gi|229269866|gb|GG666045.1| GENE 339 338192 - 338749 832 185 aa, chain - ## HITS:1 COG:CAC2094 KEGG:ns NR:ns ## COG: CAC2094 COG0231 # Protein_GI_number: 15895364 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Clostridium acetobutylicum # 1 185 1 185 186 223 60.0 2e-58 MISANDLRKGVTFVYDNDVYQVVDFQHVKPGKGAAFVRAKIRSVMNGGAKDVTFNPNEKF ENAVISTKEMQYLYNDGQLYYFMDPESFEQIGIEEDNVKDAIIYVRENDTVLIKFYQGKP FSIDPQNFVELQVVKTEPGVKGDTATNVTKPATVETGAVINVPIFVNEGDVIKIDTRSGE YLSRV >gi|229269866|gb|GG666045.1| GENE 340 338900 - 340066 735 388 aa, chain + ## HITS:1 COG:lin2155 KEGG:ns NR:ns ## COG: lin2155 COG1323 # Protein_GI_number: 16801221 # Func_class: R General function prediction only # Function: Predicted nucleotidyltransferase # Organism: Listeria innocua # 1 378 1 378 391 176 31.0 9e-44 MKSLGIISEFNPFHNGHKFLLEQAKIQLNTDLHISFMSGDFIQRGDASVMDKYLRAYVAI KSGFDLVVEMPSFVSLQAAEFFALKSIVILDKMNIDYLVFGIENISPDDFLQGASKIIEN QNSIDGKIKSLLKEGLSYPKAYNIMIDELVGRDFVSSNNILALEYLRAINKVNSKIKPYP IKRIKTSTKDKLIYDECFASSTAIRNNLDSEIYKLMPAISFEKLIDFRNTYQDFDEDYIY KIFRYKILIEKSPMTTILGFEEGIDNYLYRLARRNLSYKSFLDEATSLRYTRSRIKRIIL NYILANTENLNDIDISFIKILAYNEKASQFFKKLSENLKLVINKKDISKLDSNNLLIHKK MIEASNLYSLGINRDIDYDFVHNNRPID >gi|229269866|gb|GG666045.1| GENE 341 340079 - 340564 664 161 aa, chain - ## HITS:1 COG:no KEGG:Apre_1036 NR:ns ## KEGG: Apre_1036 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 161 4 162 162 165 69.0 7e-40 MANKITDLILEMEDIMDEASSVPFSKKIAVDPDEIYEILNEMKDSLPEEIKQAQWVTDEK DRILSEASSEASNRLSQAEGEIKNFKEQAKSQYQKMVSEHELTQQARKEADRILQEAAAE AKNIRQQSYDYIDRLFTGSIDNFGQLVQQLEKNRDKILENR >gi|229269866|gb|GG666045.1| GENE 342 340573 - 341055 352 160 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 4 159 7 160 164 140 43 1e-31 MKVIYPGSFDPLTKGHMDIIKRLSSMFDEVIVAILNNENKCSLFTVDERKDIIKEEIRDE KLSNTYIYSFDGLLVKFAQDHDVKLIARGLRGVTDYEYEKDIARVNSTLYEGLETIFLLS NPTYSFVSSSGVREIAAFKGDVSAFVSPSVEKKIKEKFNY >gi|229269866|gb|GG666045.1| GENE 343 341052 - 341597 267 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 179 12 192 199 107 34 7e-22 MMKVVAGKYKGYNLLSPKSKTSRPTDNKVKEAIFDMLYPYKNSFRALDLFSGTGQMGIEF LSRGADEVYFNEKNYSNFSILNQNLDKVDRQRVYASKMDFIRCLKDLSEKGLDFDYIFLD PPYETDFIDKALFYILEYDLLSEDGIVITESSKDIDFSDKYNLNILKDKSYGRKFIKFYT K >gi|229269866|gb|GG666045.1| GENE 344 341594 - 343366 1379 590 aa, chain - ## HITS:1 COG:SA1070 KEGG:ns NR:ns ## COG: SA1070 COG1200 # Protein_GI_number: 15926810 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Staphylococcus aureus N315 # 16 552 96 644 686 359 39.0 9e-99 MIVSYMYFAEGDFKKIRVIWFNDRFSIRKIRLNETYKFYTKVAYKNGYYESVNPIFENLD GDMIGAIYSMYPLTSGISQKNLNAFIKEALKEFDVREDILSKSLKERFNLMDREKALKEV HFPSNLQTLFKAKTDIKIGDLLKELIFLDYLGKLQRNKQDISLKYDLKEILAKLSFSLTR SQLRSLKEILEDSDKDISMNRLLIGDVGSGKTIVAMVSMLVFGLNSYQAAMMVPTEVLAI QQYEKYKDFIGGFGLKLALLTGSSKNKEEIKEGLRDGTIDMVVGTHALIEEDVKFRNLRL VVNDEQHRFGVRQRQELAKKGIDANYLTMTATPIPRTLSLRINKMLDLSIINELPKGRAS VITSIVNEDHQEFLFENIKEGLKAGRQVYVVSNNIDAEDTNSVENLYKKYKKIFKTHRVE KLHGKLKASLKEEILKKFNNHEIDILISTTVIEVGIDVANANTMVIYNSNNFGLSQLHQL RGRVGRGEYDSYCYLVSKDVNPKSKLKILVDSNDGFEISQKDYELRGGGKILSLIQHGKN LSEIEFLNMTEEETNKTFEIFDYLKENSYKGVNLEFIRDYFDEDKDIILN >gi|229269866|gb|GG666045.1| GENE 345 343578 - 345146 1820 522 aa, chain - ## HITS:1 COG:SPy1885 KEGG:ns NR:ns ## COG: SPy1885 COG1461 # Protein_GI_number: 15675702 # Func_class: R General function prediction only # Function: Predicted kinase related to dihydroxyacetone kinase # Organism: Streptococcus pyogenes M1 GAS # 1 522 1 554 554 363 39.0 1e-100 MKVIDASKLQQMVIGAYKYLEENKSLVDELNVFPVPDGDTGTNMNMTMKSGVDKVNQTSG LSVEEIAKALSQGTLMGARGNSGVILSQLVRGMSKTLKGKDEIGALEIRDIFKNATKTAY KAVMQPTEGTILTVARKMSEKAEEAFDENKNLDDYLVEIITEGQIALDNTPKQLPVLKEA GVVDSGGQGLMFLLRGALNALNGDIDRDIDLSSSESVEEGSYKIYFELLIKENDFKKISD SIDSLSTNFDYEYKDGHLKAEARSEYPQQIISKILVDGILVKLEVENTKPDIENAVKEPE KLKKYGFIAVSRGEGFDDILKSMNIDKIISGGQTMNPSTEDIYKNIEEVAAENIIIFPNN KNIIMASKQACQLTDKNAMVLETRSIPETFTAMLEFDEDEDLEENIENMADAISDMHTVE VSISIRDTSVNNIEIKKDDYIGILDGKIVATTSNIEETTREAIKIAIDKDDDISLVTLYY GEEADKRKAKELVKKLSKDYKDIDIELVYGGQPVYYYQATLE >gi|229269866|gb|GG666045.1| GENE 346 345154 - 345507 477 117 aa, chain - ## HITS:1 COG:SA1068 KEGG:ns NR:ns ## COG: SA1068 COG1302 # Protein_GI_number: 15926808 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 1 115 1 115 124 79 43.0 2e-15 MTIRYVNNLGKITIDDSVIANIAVASVMQSYGVVGLASRSARDGIYKLLGVNNMQRGVEV IRRDNGTVAIYISLFLEYGIRIPVVCQNIIDNVKYNIEKSLNVNVAEVNIYVQGINR >gi|229269866|gb|GG666045.1| GENE 347 345691 - 349218 4426 1175 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 5 411 2 409 413 560 66.0 1e-159 MTITRAMKTMDGNTAAAHVSYAFTDVATIYPITPSSPMPESVDVWAANGRKNLFGQEVKV KEMQSEAGAAGAMHGSLAAGALTSTYTASQGLLLMIPNMYKIAGERLPGVFHVSARTIAT HALSIYGDHSDVMAARQTGCAMLVSNSVQEVMDLSPVAHLAAIEGRIPFINFFDGFRTSH EIQKVEVWDYKDLATMLDFKAVEEFKNHSLNPERPKHMGTAEKNIFFQRTEASNTAYTDI VGIVENYMNQINEKIGTNYGLFTYYGADDAENIIIAMGSVCQAARETIDVLLKEGRKVGM VEVHLYRPFSKEHLLKAIPSTVKKIAVLDRTKEKGAVGSPLYLDVKACYYEEEKRPLIIG GIFGLSSKDTIPADIKAVYDNLDKDEPKHDFTLSITDDVTNKSLPRDDFKVRHEGTSRCK FWGFGSDGTVGANKQAIKIIGDNTDMYAQGYFDYDSKKSGGLTVSHLRFGKEPILSTYLL DEADFISCSKQAYVNQYDLLAGIKEGGTFLLNTVWSVEELEQHLPAKMKRVLAEKNIDFY ILDASHIAQSIGLGGRTNMIMQSAFFNLTKVIPVEDAVRYLKESIVKSYGHKGEDIVNMN YNAVDKGLEAPIKVNVPAEWKDAVDEVKEEKELPDFIKNIVKPMLEQKEDDLPVSAFKGI ENGEFESGTTAYEKRGIALNVPEWQIDNCIQCNQCSYVCPHAVIRPFLVTEEEKANAPEG FETKKAIGKGMDGFTFRIQVSPLDCTGCGNCADVCPAPKKALLMKPFEEEVEKEKDHWTY AHEVVGYKENVMDDMTLKGSQFKQPLFEFSGACAGCGETPYAKLITQLFGDRMYIANATG CSSIWGASAPAMSYTKNLATGKGPAWGNSLFEDAAEYGYGMKLAAEANTHLLEDNMTKFL ELGLDSQYNEAFKAWLEGKDDVRASKEATAAILNVKEEVEGEDAKKYLNNILKLKDYMIK KSVWIFGGDGWSYDIGFGGVDHVLASGENINIFVFDTEVYSNTGGQSSKSTPLSAVAQFA ASGKKVRKKDLGLMMTSYGYVYVAQVAMGANQNQTLKAIKEAESYDGPSIVIAYAPCINH GIRIGMGKSQYREKQAVEAGYWHLWRFDPRLAEEGKNPFQLDSKEPTGSFQEFIQGEVRY SSLKRSFPETADELYQEAEKAAKERYESYKKLANK >gi|229269866|gb|GG666045.1| GENE 348 349528 - 353052 3437 1174 aa, chain - ## HITS:1 COG:CAC2229_1 KEGG:ns NR:ns ## COG: CAC2229_1 COG0674 # Protein_GI_number: 15895497 # Func_class: C Energy production and conversion # Function: Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit # Organism: Clostridium acetobutylicum # 5 410 2 409 413 541 63.0 1e-153 MTIKRSKKTMDGNTAAAHISYAFTEVATIFPITPSSPMPECVDVWAANGRKNIFGKEVIV KEMESEAGAAGAMHGSLGAGALTTTYTSSQGLLLMIPNLYKIAGERLPGVFHVAARTIAT HALSIYGDHSDVMSVRQTGVAMMVANSVQEVMDLGAVAHLSAIKARLPFLQFFDGFRTSH EIQKIDVWDYKDLAPLVDYNQVRFFKNTSLNPERPKTMGTAQKNIFFQATEASNMIYEQV PGIVEDYMDKINDLIGTNYRLFNYYGAPDAERILIAMGSVCQTIRETIDELRKNDEKIGL VEVHLFRPFSKEHLLKVIPKTVKKIGVLDRTKEKGAEGEPLYKDVVTAFYDEKNKPEIIG GRFGLGSKDTIPADIEAAFNNLKCEMKKDFTLSIHDDVTNKSLQRTELRIRHEGESRCKF WGFGSDGTVGANKEAIKIIGDNTDMYVQAYFDYDSKKSGGLTVSHLRFGKEPILSTYLLD EADFISCSKQAYVFNYDLLAGLKDEGIFLLNTVWAKEELEERLPGSMKRYLAKHKINFYI IDASHIAEKIGLGSRTNMIMQSAFFNLTKVIDTDDAMKYLKDSIVKAYGHKGEDIVSMNN KAVDMGASAYEKINIPEAWASVKDEVKEEVKLPDFIKNIVKPMEEQKEDEIPVSAFKDID NGAWETATTQYEKRGVALNVPEWQIDKCIQCNQCSFVCPHAVIRPFLVTEEEKAKAPAGF ATKKAIGKGLEGYDFRIQISPLDCTGCGNCADVCPAPQKALIMKPFEEEVEKEKDDWTFA HEVVGYKENVMDDSSVKGSQFKRPLLEFSGACAGCGETPYATVITQLFGDRMLVANASGC SSIWGASAPSVSYAKNCEGKGPSWANSLFEDNAEYGYGMKLATDSNKYLLEVYMKNFLEL NLETPFNEVFKKWIENKDDVKGSKEATAEILKIKNETVDSENGRSLLEKIFDLKDYLIKK SVWIFGGDGWSYDIGYGGVDHVLASGEDINILVFDTEVYSNTGGQSSKATPLAAVAQFAA SGKKVRKKDLGLMLSTYGYIYVAQVAMGANQNQCLKAMREAESYDGPSIIIAYAPCINHG IRIGMGKSQYREKQAVEAGYWHLWRYDPRLEDEGKNPFQLDSKEPSASFQEFIQGEVRYS SLKRSFPETADELYEEAEKAAKARYNTYKRLAGK >gi|229269866|gb|GG666045.1| GENE 349 353173 - 354183 1036 336 aa, chain - ## HITS:1 COG:BS_yvoB KEGG:ns NR:ns ## COG: BS_yvoB COG1493 # Protein_GI_number: 16080553 # Func_class: T Signal transduction mechanisms # Function: Serine kinase of the HPr protein, regulates carbohydrate metabolism # Organism: Bacillus subtilis # 26 321 4 299 310 247 43.0 2e-65 MTEVFDIDDKSEQISEVNSGANHKTIKLYKVVENLGLEIISASTDYKEIVLENADVNRPG LQLTGYMEEFPYKRLQVIGTVEYNYLTSLDSKMQYERFRGILSYAIPAVIFSYNREINED IVDLARYYNITLLRSPAKTTKLISDISDQLEYQLAPTTNVHGELLEIFGIGVLIMGKSSV GKSETALELVTRGHRLVADDMVDITAIDKKIVGEAPENIRHFMELRGLGIINVRRLYGSG AIKLQTEVDMVIELEQWKDDYEYDRLGIDEHYIELLGIKLPHLVVPVRAGRNIALIIEVA AMNQREKAFGYNAARIMTDSIFHPERLVDKSEKIGG >gi|229269866|gb|GG666045.1| GENE 350 354187 - 355974 1408 595 aa, chain - ## HITS:1 COG:CAC0508 KEGG:ns NR:ns ## COG: CAC0508 COG0322 # Protein_GI_number: 15893799 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Clostridium acetobutylicum # 1 592 20 618 623 485 46.0 1e-136 MRNADGEIIYVGKAISLKNRVRQYFDNNKNKGAKVLAMVSHIADFEYIIVQNEVEALVLE SNLIKKNRPKYNIVLRDDKQYPYIKINKEKFPRIQKVRQVNKDGADYFGPYPDAYAVNDA IDLFHDYYPFRTCNLNFDRGQSLDRPCLNYFIKKCKGPCIGEEDESTYLSKMDDVRQFLD KKDRKISDKVLERMNEESAKLNFEMAAKYRDYYRALSILSERQNVTETTGDDVDIIAISK GVSIIVVQVFFMRKGHIVDREHYIIKNEFAEEEADIISSFIKQFYLDLIFIPKEILVQTL PSDLESITDFLNQKKGSKVKIHQPKLGKKFELITMAARNAEDMRIKHEKRIDRKERNKSS GLNQLKEILNVDKINRIEAYDISNTSGVQSVGSMVVFENGISAPKEYRKFKIKTVEGPDD YASLREVLIRRFTNAKKEIAKGSTHTGFGKLPDLILMDGGRGQVSIAKEVFKEMNIDIEV AGLVKDDKHTTRGIIYNNEEIQIRRKDPVYKLIYEIQEEAHRFAINYHRSLMRKSMKKSE LDDIKGVGKKTKANLYKHFKTISNIKKASIEELMEVPLVGKEAAVEIYKFFRLKG >gi|229269866|gb|GG666045.1| GENE 351 356034 - 357803 1616 589 aa, chain - ## HITS:1 COG:FN0453 KEGG:ns NR:ns ## COG: FN0453 COG0006 # Protein_GI_number: 19703788 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Fusobacterium nucleatum # 1 589 1 584 584 450 43.0 1e-126 MSINKRLEQLRSLMRDRKIDAYIVATSDPHQSEYLADHYKTREFISGFTGSAGTAVITLK EARLWTDSRYFLQAQKELQGSEFELMKMGVEGYPTIVEYLDENIAEFGKIGFDGECYSVT GYKDLSENMGARVLVSDLDYISKIWTDRPDLPKDKAWIHDEKYCGLSLKEKLEILRERMA LNHCDYTFIGAPEDICYLLNIRGNDVAYNPVILSYILISKDKACLCIDEEKIAGSVREYL EENGISIYSYEYIYSLLKNIPGKNRIYLDPARTNVAIYDAINANVKITQGINLTTYMKAV KTDAEIESIKKAYIIDGVSLVKFFNWLEVGAKTGSLNELVASNKLHDLRAQNESFIEDSF ETIAGYKDNAAIVHYAPSKTGSKTLRDEGMILVDSGAHYKEGTTDITRTIALGSLREDEK IDYTLVLKSFLSLFLAKFKNKTKGTRLDMIAKYPLWKAGKDFFHGTGHGVGFVLTVHEGP QAISERNEVEFVENMTTSIEPGLYIENSHGIRIESEAYVKKAFDNEFGHFLEFETLTYVP IDTRPIKIEMLSTEEIDWLNAYNKKCYELLSPYLDGHDLEYLKESCKEI >gi|229269866|gb|GG666045.1| GENE 352 358003 - 359100 1432 365 aa, chain + ## HITS:1 COG:CAC2134 KEGG:ns NR:ns ## COG: CAC2134 COG0012 # Protein_GI_number: 15895403 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Clostridium acetobutylicum # 1 365 1 365 365 401 60.0 1e-111 MKLGIVGLPNVGKSTLFNAITKAGALVANYPFATIDPNVGLVNVPDNRLNVLSEMSNSKK IVPAVVEFYDIAGLVKGASKGEGLGNKFLSNIRETDAIVEVLRCFDDPNVTHVDGSVDPL RDIETINLELILSDLELVDKVLEKKRKVARADKSARAEVEVLEKIVAVLEEGKSARILDL NNEEKKLLRSYQLLSTKPIIYVCNVNEDDAADDGASNKYVEIVRNFAKSEGAEVSVVSAK IEQEISELETEEEREEFLAMIGLTESGTDRVIKDSYKTLNLISYLTTGEVETRAWTITKG TRAQDAAGKIHSDIARGFIMADVISYDDLVAAGSEAKAKEAGKLRMEGKDYIMQDGDVVE FKFNV >gi|229269866|gb|GG666045.1| GENE 353 359093 - 359716 699 207 aa, chain + ## HITS:1 COG:SA1921 KEGG:ns NR:ns ## COG: SA1921 COG1435 # Protein_GI_number: 15927693 # Func_class: F Nucleotide transport and metabolism # Function: Thymidine kinase # Organism: Staphylococcus aureus N315 # 16 185 14 185 199 129 39.0 5e-30 MFKKMIKRQGKLIVHTGSMFSGKTTSLWRELYRMTIANYKTVAFKPSVDNRDSDKKIVSH DNLSLDAIKIENLNEILDYVKKHEIDAIGIDELQFFPNEPSEVVDIFNKLMAKNITIVIS GLDMDYKAKPFEIIKEIMPLADELIKHHAICASCGEDAWASYRKSSDDSRIQIGSKDVYE PLCRSCYNEKMAEREKTKNQIELNLGK >gi|229269866|gb|GG666045.1| GENE 354 359744 - 360550 753 268 aa, chain - ## HITS:1 COG:lin1821 KEGG:ns NR:ns ## COG: lin1821 COG0024 # Protein_GI_number: 16800888 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Listeria innocua # 1 252 1 250 252 270 49.0 2e-72 MIRIYNETYFEKMRKAAEILCQTHLALREVIRPGLTTNDLDKFANKFIVDHKKAIPAQLG YQGFPFTLCTSVNDEICHGYPTNKPLKEGDILSIDNVVNLDGGLADSCWTYTIGEMSETD QKLVDVNLEALNRAIKVAVPGNRIGDIGAAIQECVEDENGFSVIRDFIGHGIGKEMHEDP QVPHYGKAGRGPRIEVGMVFTIEPMIAIGDWRMKLDSNGWTARTVDGSKVSQFEHQLIIH KDGPEVITDQSKYKLTESDLEFIKNYKF >gi|229269866|gb|GG666045.1| GENE 355 360592 - 361401 1026 269 aa, chain - ## HITS:1 COG:no KEGG:Apre_1049 NR:ns ## KEGG: Apre_1049 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 269 1 265 265 307 58.0 3e-82 MGEYMLTTQFLKSRTSTRDFKDVDLKKADLEKLENIIDSEIIKLGKDDLAFIVQTDGEAV YKALDGKAGYKGIMIKAPAYLALNTLNDDPASLVKGAYGVEEIITELDKMGIGNCWITVG DVGEDIKESVFNYEKGEVNLLLAIGYPVDTTVREHQFDDRKGIGEFVFIDDLGNKATNED LEQRGLDEIFAYARFAPSAYNAQPWRFLLVDDLIKLYIEDYKGNANLLDAGIIMYYIDKL GESISMGSNWEIKPELNDDKYVYIASKQL >gi|229269866|gb|GG666045.1| GENE 356 361486 - 363282 1570 598 aa, chain + ## HITS:1 COG:SP1087 KEGG:ns NR:ns ## COG: SP1087 COG0210 # Protein_GI_number: 15900955 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Streptococcus pneumoniae TIGR4 # 3 579 8 620 763 208 26.0 3e-53 MKLTDIQNRAANFIDGPCLVLAVPGAGKTTMLLERVKILSKITSPNKILTLTFSRTQAID MNNRYTGDDTNIMTIHAFCYLIIRNYLKKFHRELRLLESTDTYNKYDLVKRIYQDINNKK PSREDILNFFTETSYMKNAMLDESYLKKVRIKNIEKVYQTYENFKKINNYIDFDDMQILA LKLLEENPRLLKSIHQKYEYFQLDEGQDTSLLQFKILKEIVNLNNNFMVVADDDQSIYSF RAADPEYLLNFTAYYPRAEIIIMNENHRSSKNISTLAGNFIKENKFRYEKEIISKKDMGD KIIIKTLHDSYDQYNFIRKNIDNDKTNAILFRNNISAINLVSFLLEDGIDFSINDDFLDF FKSQIIDDIFDIIKFSEDFNNVSAFENIYYKIKTFIKKTEIEKLNTKPLNQDVFDFFYNF IDYDRKNSLYDIEKKLKHLRNLPLSRKISYIYKYMGYKEYASLKANKFAEEVINKDLFIE SLINFTQDLETIEDFDKKVLSLKKKIKMINKSSIILQTIHRSKGLEYDKVFVVDLNKNEF PIIDYEKDPIKNLEEERRVFYVAMTRARDNLYILATKKRNNKKALPSEFFTRIKYLNK >gi|229269866|gb|GG666045.1| GENE 357 363326 - 364600 1172 424 aa, chain - ## HITS:1 COG:BS_folC KEGG:ns NR:ns ## COG: BS_folC COG0285 # Protein_GI_number: 16079860 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Bacillus subtilis # 4 418 5 425 430 248 36.0 1e-65 MKNFDDYLDYLYGRGSSGEDHTLRNIRKVMEAFDNPQDKIKTIHVAGTNGKGSTAKMLAN VLSKKVKCGIFTSPYMVRINEEISINGVDISNEDFCNLMDRIRPVAEQCDEEGYHITYFE FLTAMVYLYFYEQKVDVAVIEVGLGGSLDSTNIIKSPLASVICSISMDHMNVLGSTIEEI AANKAGIIKKNRPVFVYPQTSEEAFRVIKEKSIAEQAQLFTFKKDEINIKDFSDFGNTFD FKSYKDLQTSLRGEHQIYNASLALMVLDYFKKDFNLSEDDIKEGIRETYNPGRVDLVSTN PRVLLDGSHNKESIDALLASLKKFDYDKLIVGFSILKDKDHKDIIRKIAGLADELIITHI DDNPRALDTQIIDEEAKAYASDIHVIENNKQAFEFSLKEAKDKDLVLWCGSLYLIGKILS YMEK >gi|229269866|gb|GG666045.1| GENE 358 364663 - 365370 477 235 aa, chain + ## HITS:1 COG:AGc2846 KEGG:ns NR:ns ## COG: AGc2846 COG3503 # Protein_GI_number: 15888866 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 235 15 245 321 95 30.0 6e-20 MKRIQIIDTVRGLTIISMVLFHLFYNINYFWALDFYNETVFNRIWQLSIALSFFLISGMT SSFLNPRNNIKRGIFTSLIGFAITFITYIFAKDQLIIWGVLNGLGLSMIIAGLLQKSISP RLWPLFILAFAFSYKIPAGLLWENSFFNGLYQMNLFPIGFPSFDFYSNDYFPLIPWLFAF LAGLSLGKYLHKKNFFNFDVKENFLAKIGRHSMLIYITHQIILYPLVSLIYKLTL >gi|229269866|gb|GG666045.1| GENE 359 365453 - 365584 80 43 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485086|ref|ZP_03915402.1| ## NR: gi|227485086|ref|ZP_03915402.1| hypothetical protein HMPREF0072_0489 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0489 [Anaerococcus lactolyticus ATCC 51172] # 1 43 1 43 43 66 100.0 7e-10 MDRIKKYKEHYPASYFILASIITLVLVYKFGYAIGKFVAHLGL >gi|229269866|gb|GG666045.1| GENE 360 365658 - 366254 635 198 aa, chain - ## HITS:1 COG:no KEGG:Apre_1054 NR:ns ## KEGG: Apre_1054 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 198 4 201 201 209 63.0 4e-53 MKKAKKLILGLFTAVILIFASYFFGMKSSLKNSETKISSEIIKNQILSVKELTTLKYKYT NVGSFENQAEFYGIKLPFTQKKFIISYDGEVNAGINLNDIQVTLNKEDKKISIQVPKAEI LNHVIDENSLTIFDEKNSIFNQLEVKDFSDFRKDEMKKVEKNLEEKGFLEEADKKTKEAI EEILKINPLLEEYTIEFN >gi|229269866|gb|GG666045.1| GENE 361 366311 - 366937 524 208 aa, chain - ## HITS:1 COG:lin1656 KEGG:ns NR:ns ## COG: lin1656 COG0220 # Protein_GI_number: 16800724 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Listeria innocua # 1 207 1 211 214 161 43.0 6e-40 MRLRHKPHAIPTMQESPYIIFDPENHKGSWKDLFKNNNEIELEIGAGKGEFIVGKAINET NKNFLALEMNTNAFVAACRKIEENELTNVYGIVGKAEDLLDMFKQNEISKLYLNFSTPWP KKRHNKRRLSHQNFLKLYQVICKNGAELELKTDNEDFFEGSLAYFQEFGMEIIEVNRNLA EEKSIVTEYERKFRNKNMPIFYVKAKFK >gi|229269866|gb|GG666045.1| GENE 362 366982 - 367869 803 295 aa, chain - ## HITS:1 COG:BS_yitS KEGG:ns NR:ns ## COG: BS_yitS COG1307 # Protein_GI_number: 16078175 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 6 288 5 280 283 130 30.0 4e-30 MSDFILSATSTVDISREELEKENIKWISFPYQIDGKEYMDDLGKTLSLDDFYQAMIDGAV ATTSQITYVRYINYFEDLLKEGKDILHMCLSSGITGEYQQALMAKKELETKYPERKILIL DSLTATACQGVLLLALNEQRNEGKTIDEVYQWATKNRVNVNALFFTSDLTYLVRGGRLSK AAGSFGNLLNICPIIEVNLEGKLVVRDKIRTKKKAMKSLAKQISNRLIKDFPYLNEIFIV HTHSKEDAEELKSILKELLPDYKGNISIHEIGTTVGAHLGPGTVGAGFWGEEKTI >gi|229269866|gb|GG666045.1| GENE 363 367920 - 369263 1048 447 aa, chain - ## HITS:1 COG:SA0180 KEGG:ns NR:ns ## COG: SA0180 COG1114 # Protein_GI_number: 15925890 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Staphylococcus aureus N315 # 1 428 1 428 449 309 45.0 7e-84 MRKKLTLSENLLIGSLLFGLFFGAGNLIFPLELGQRSGANISLVTIGFLLSAVSLPILAV VATAASDSESLFDLSKAAGSKFAYFFTTLLYLTIGPGFAIPRTATTTYEVIFEGNESFYN SFGLLIFSLVFFALVLYFSIKKAKLIDTIGKFMTPLFLILLSILLISTIFKPMGPVGMNL PTPKYGSNALAVGFVDGYNTLDAPAGLAFAIIIISSIKDLGVTDKKSMALETLKSGLVCL FAMSIIYTGLSFMGGASANILDDFENGAVILSQISEHYLGSLGHILLSIIVFLACLKTAI GLVSACSEMFEEMLKNKLSYKTYCVIFSLVSLLIANLGLKQIITLSLPVLMFIYPISIVL IVVSIISIFMGKRKFVYQISLGVTAAFAFLDFLKTTPDFISKAPMVVKILDFANNSLPGY EIGFAWVMPAVIAFIVGLLIDKKFIRN >gi|229269866|gb|GG666045.1| GENE 364 369320 - 369670 451 116 aa, chain - ## HITS:1 COG:lin2520 KEGG:ns NR:ns ## COG: lin2520 COG1393 # Protein_GI_number: 16801582 # Func_class: P Inorganic ion transport and metabolism # Function: Arsenate reductase and related proteins, glutaredoxin family # Organism: Listeria innocua # 6 95 7 96 117 100 54.0 8e-22 MKIICYSKCSTCKGVLKTMDEKKLKYELRDIKEDNPTKEEIKKWHEATDYDIKRFFNTSG MIYRQENLKDKLDGMSLEEKYEKLASDGMLVKRPILFLDDGKILVGPDVKKYVDSL >gi|229269866|gb|GG666045.1| GENE 365 369760 - 371538 1024 592 aa, chain - ## HITS:1 COG:lin1803_2 KEGG:ns NR:ns ## COG: lin1803_2 COG2898 # Protein_GI_number: 16800871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 78 582 69 583 613 270 32.0 7e-72 MKKIKEYRQGIINILILSIISISLYYIAKSALDIWVRVLLGVALLGFFFKVFLKFKGFFI KIKENYGEIAARLFKEAIQKINSVFIGFYGLVFILSADVGGFLSYFPFNEFSYVTVGLFR SVAELMTGFLFIVASRLSFARQKRIEKILYFLIGFTGIYLYLVGETFISLIPLIIMVLLT YFTRETLVKESFIYSMEEVLIDLVFGGFWIIIYFKNTFKTRPLLTIPLTYKFIFFTLTFF AMALALRMILLYMKGHDEFLENPDLKIYKEFLKENNLNSSTSAGLGLLGDKYIYYYKKED KRLLAFIYQVVNNKIIVMGEPIGNKEFLEEGLNEFIKKCEVLSLNPIFYEVGREFTFLLH DYGYDFMKFGENAFLDLGEFSLAGRKKSSLRNILNRFEKDGYEFKIVTPPFDDITFDRLK IISDKWLKGREEKGFSLGFFDRSYLNDSSIAFVLDENKEITAFTSLMPNYDDKIMTIDLM RYDTDMNVNSMMDYLFLNLFIYAQENNYKYFNLGMAPLSNVGIYKSAYLSERIASFIFKY ADSLYPFKGLRNYKSKYATHWESRYTCFSKGNFIITSILAIMAADKGKIGEK >gi|229269866|gb|GG666045.1| GENE 366 371535 - 372236 418 233 aa, chain - ## HITS:1 COG:lin2547 KEGG:ns NR:ns ## COG: lin2547 COG0596 # Protein_GI_number: 16801609 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Listeria innocua # 13 229 10 230 239 86 27.0 3e-17 MGNEIILKDKTRIYYKEYGSGEDLFLLHGNDGDMTYFEYQIGYLSKYFHLILIDFRDHGF STNTKGRLNFDLLANDLNEVFDQMGIKKANLLGFSDGANLCLIFNKLFPDKINKMILNAP NARFKGITFPAKVIMILENILWSILPFFKRNKRVANLLLTDLKIDIKDLRNIDKDTLILV GSRDLIRISHIKKIARNIKNSRLVIIKNQGHRLARTSSEIFNKLVYKFLKGDL >gi|229269866|gb|GG666045.1| GENE 367 372332 - 373699 1771 455 aa, chain + ## HITS:1 COG:aq_2099 KEGG:ns NR:ns ## COG: aq_2099 COG0260 # Protein_GI_number: 15607055 # Func_class: E Amino acid transport and metabolism # Function: Leucyl aminopeptidase # Organism: Aquifex aeolicus # 22 450 49 484 493 272 38.0 1e-72 MKFNYRYKEINQINFAFKDKNELEFFKGDKGEVLAFHGKIILGLGEEDKFNKEIFKEAIC SLGKFLKDKDVKEISIKENSTGLDDKDFVLSLAEALIVSSYDFNYYKSDKKENLFEVVNL DESFNEFEADVDELQKVLCGQFLTRDLVNLRSNDIYPETLAQKASENLSDLGVKVTIYGK DEILSMGLTAFYEVAKGSDKEPKFIVMEYFHGQKDKAPLALVGKGLTYDAGGYSIKTSNG MKTMNSDMGGSGSVIGAMKAIALNKLQVNVVAIVAACENLISGRAYKPGDIIKARNGMTI DVDNTDAEGRITLADAVNYAATEYKPALIVDLATLTGAAIGALGETYTASITNNEEAFKK VLRASKKVDEKIWLLPNDPFYKTYNESENGDVKNSGGPKAGSITAGQFIENFVEAYPWVH LDIAGTAYLSAPQGINSKGATGVHVKTLYELAKEF >gi|229269866|gb|GG666045.1| GENE 368 373758 - 374471 295 237 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 228 1 230 245 118 29 4e-25 MSILRIENLSVSYGNIKALKGISLRVEEGEVVSLIGANGAGKTTTLQTISGLLAVQEGDV YFNDKSIKKKKAFQITREGLAQVPEGRRVFKGLSVEDNLKLGSISAGLNPDELKAELEKI YKLFPVLKERKNQKAGTLSGGEQQMLAMGRALLTNPKVLLLDEPSMGLSPLFVDKIFETI RILKEEGRTILLVEQNANLALDIADRAYVLETGKIVKEGKASDLKSDPDVKAAYLGV >gi|229269866|gb|GG666045.1| GENE 369 374484 - 375275 245 263 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 25 253 33 252 329 99 26 3e-19 MLKVNSKEVVSENVLEINNLGISFGGLKAVENVSFKIKKGELLGLIGPNGAGKTTLFNML SGVYTPTSGEIILDGKKVNGTSPDKLSKLGVARTFQNIRLFDNLTVLDNVKLAMNQYMEY GVLTGMFRLPSYWKEEKEATKMAKDILRLFDLEKYYMTLAGSLPYGAQRKLEIARAMATR PKVLLLDEPAAGMNESETQDLMDSIRVIRENTGVSILLIEHDMNLVLGITDRLIVLNYGE ILAQGNPREVISNKEVVRAYLGS >gi|229269866|gb|GG666045.1| GENE 370 375259 - 376233 867 324 aa, chain - ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 42 324 1 285 285 284 58.0 2e-76 MSTNKKKTYLITTALVILFFVIIQGLIGGGIINRYWQNILILICINIIMSTSLNLTVGVL GQINLGHAGFMAIGAYAAALFLKSGLVGGFLGYFLSLIIAGVVATVFGILIGLPVLRLTG DYLAIVTLAFGEIIRVLIENLSFTGGAQGLAGIPTTHDFGKYFLVAAFLVTMIFTYASCR HGRAVLSIRDNELAAESCGINITKYKTFAFALSALFAGVAGALYAQSFGVLAANIFNYNK SFDYLVMVVLGGMGSMTGAIFSTIGLTILPEVLKPMAEWRMVIYAVILIAVMIYRPQGLL GRKEFSLRKLLRLEKYKKGDVEGE >gi|229269866|gb|GG666045.1| GENE 371 376237 - 377124 871 295 aa, chain - ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 1 295 14 308 308 328 64.0 7e-90 MDFISQFFNGLQLGSIYALVALGYTMVYGIAKLINFAHGDIIMVGGYTVFLAIGLPLFKT GLPLWLAVVPAVIVCTLLGVLIERVAYKPLRNSSRISLLITTIGVSLFLQNLFVKIFTSN AKPLPALFPQKSLSFGDVHLSLATVITIISTIILTYLLNLFVNKTKYGKAMLAVSEDYGA AELVGINVNQVMTMTFAIGSALAGVASVLYVASYPQIQPFMGSMLGIKAFTAAVLGGIGS IPGAVVGGLILGIIEVLTRAYLSSAYADAIVFVILILVLLIQPNGLFGKLEKEKV >gi|229269866|gb|GG666045.1| GENE 372 377199 - 378368 1842 389 aa, chain - ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 3 385 1 381 383 373 50.0 1e-103 MKLSKKLAVGMLLAGLVFTGCSNNEGSNKESKTEMGDTVKLGNSAPLTGPLSIYGITTNN GIKLAIKEINEAGGILGKKIEWSEYDDKGEITDAVTNYNKLMEEKPGAILGGVPSKPALA MAESSTNDGVVYITPTGTQANITEGKENVFRTCFTDPFQGEVLANFSKEKLKAKKLAVLR NQSSDFSMGVADVFVKKAKELGMDVVADESYGDSDTDFKAQLTKVRKEEPDVLFIPDYYE KVALIVPQVRDAGINATLVGADGWDTVLSVMDKSSFDAINNSYFTNQFTLEDPSENVQKF IKAYKEAYKDDPSTFAAEGYDTVYLYKQAVEEAKSFDWDKVIAALKKVSFKGITGSFTYD ENNNPVKTAKMIRIENGKYEFDSDVGVNK >gi|229269866|gb|GG666045.1| GENE 373 378824 - 380149 1510 441 aa, chain - ## HITS:1 COG:FN1480 KEGG:ns NR:ns ## COG: FN1480 COG2239 # Protein_GI_number: 19704812 # Func_class: P Inorganic ion transport and metabolism # Function: Mg/Co/Ni transporter MgtE (contains CBS domain) # Organism: Fusobacterium nucleatum # 9 441 17 449 449 304 39.0 2e-82 MAERNYNVDNLKQLQKEINKMNPVDIADKLEVLPEKSVAIWIKLLNKDLLADTFTELRPD NKDRVLKILSEESIKDLVKELDEDELVDTLQELPANMVKKLMTSHIDRDRREIVNELLGY PEESVGSIMTVNFLSVKSSETPAAAMKKVMESDLDAEKLEQIWVTNDSLVLTGFVFIADL IRNKKATIESITQQITAAVSPTDDQEVVAKLSIKYDLGEVPVIDSEGRLIGIVPAEDVID VVHEELQEDFANITGISDQGESYIDESSFTIAKNRTTWLVICLITATMTGFIIQRYESLL AQAVALTAYIPMLMDSGGNAGSQSSTTIMTQMFSGNLSAKDFFKVIFKEIRVGTLVSLVL VAINFLRILIVDNVNIAVNLTVSLTLFLTIVISNIIGGLLPLLADKLHIDPTVMAGPLIT TIVDTGVLLIYFEVASVLLGI >gi|229269866|gb|GG666045.1| GENE 374 380372 - 381067 642 231 aa, chain - ## HITS:1 COG:L157841 KEGG:ns NR:ns ## COG: L157841 COG1011 # Protein_GI_number: 15673499 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Lactococcus lactis # 1 228 1 228 230 123 35.0 2e-28 MKKILWDIDGTLLNFDLAETIAINNCFDIFDLEKPTEEMIRAYKKINTNYWERLERNEVT RDEVLLGRFRDFFDLYGIDSKNVEHFNYNYQMELGKTYVFNPYGKEIVNHLVGKYDQYAV TNGSLTAQRGKLEGSELNKIFKQSFISELIGFEKPDIKFFDFVFKKIGSYKLDDYVIIGD SLTSDMLGGVKAKIKTIWYNPRAKENHLNLPIDIEISSLDEVENALVKIFE >gi|229269866|gb|GG666045.1| GENE 375 381169 - 382230 1258 353 aa, chain + ## HITS:1 COG:no KEGG:EF1030 NR:ns ## KEGG: EF1030 # Name: not_defined # Def: endonuclease/exonuclease/phosphatase family protein # Organism: E.faecalis # Pathway: not_defined # 1 348 1 351 351 257 40.0 5e-67 MKKTIKIIGYLILILVLAFICLLGYLMITEYKPKDIEEVAISGSAKDRIKENTPYKILTW NIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEVDADSQRT YHINEVEYFDKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKFEIESSYRYQQPV PHKWPVRLANLKRGFNASYLPIEGSDKYLVLVNVHLDAYESGSNGRLAQTKQIIAFMTEE YNKGNYLIVGGDFNQELRKGYEANVPEGIWNPSPFPYDYLTDNIKPTFDENTNSSRLNHK PYDPNDSYECIIDGFLVSDNVEVKSVKGQAIGFVNSDHNPVLLEFSLKENKED >gi|229269866|gb|GG666045.1| GENE 376 382294 - 382779 594 161 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_1336 NR:ns ## KEGG: HMPREF0868_1336 # Name: not_defined # Def: GNAT family acetyltransferase # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 22 160 8 146 146 122 47.0 6e-27 MKNGRSVMILGAKEYETFDFADDIYLVEYFPAYKLTLPWYEDKLTVKMVDNADAPYDIDK LKLMYEYLNKNGDLFYIAYKNKLVGDCAIFDDNMVAIVVSKEYRGMKIGSKVLDKLISYA REKKLSYLKAEIYDFNQVSISLFKSHAFEKIDKEMYKLELI >gi|229269866|gb|GG666045.1| GENE 377 382779 - 383198 457 139 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0260 NR:ns ## KEGG: HMPREF0868_0260 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 137 1 138 148 112 47.0 5e-24 MGLLFNTSEDMDKKVREKFGDDKSYLIVFKHNSPAKDISKWFLIGGLYYTMDSSRTFILY FDPKGVYESEISNSDKKDFLFMAWNEIEDFELVEGNKKILKINHLGKTYEYEVELNGRLF KNNFKNLTNLMENNWNRID >gi|229269866|gb|GG666045.1| GENE 378 383207 - 383365 106 52 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0868_0259 NR:ns ## KEGG: HMPREF0868_0259 # Name: not_defined # Def: Xre family toxin-antitoxin system antitoxin protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 52 17 68 71 79 76.0 4e-14 MGLSQNALAKMVGLKRRSIMAYESNTISPTLETAYKICKVFDKDIKEVFIFK >gi|229269866|gb|GG666045.1| GENE 379 383434 - 383787 278 117 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485106|ref|ZP_03915422.1| ## NR: gi|227485106|ref|ZP_03915422.1| hypothetical protein HMPREF0072_0509 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0509 [Anaerococcus lactolyticus ATCC 51172] # 1 117 1 117 117 135 100.0 9e-31 MISLAIVSYFILLVTMFFVKVPNYLPIIIGLGVFFYISFYYFKNERGRVQKYYTLKAFLL STLISIIIILALGAIQSLTLGYDPTDALDIKVFKLYVTLCIFVVYTLIARIKYVKDL >gi|229269866|gb|GG666045.1| GENE 380 383904 - 384374 228 156 aa, chain - ## HITS:1 COG:SP0640 KEGG:ns NR:ns ## COG: SP0640 COG0456 # Protein_GI_number: 15900546 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 85 156 9 80 81 63 41.0 1e-10 MIDGKIKIRLEEKKDYKRKFVEKVLRDLPDWFGIEEAILAYGKEARELDTYIISLNKEDL GFLIIKETSPYTIELYCLGLFAKSRGQGLGRILVDEVLNLYREKIRFCQVKTLDEGIDKH YDKTIGFYKSLGFMKMETIKEIWGEDNPCMIMIKSL >gi|229269866|gb|GG666045.1| GENE 381 384371 - 385222 723 283 aa, chain - ## HITS:1 COG:no KEGG:Apre_1219 NR:ns ## KEGG: Apre_1219 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 251 26 264 307 108 29.0 2e-22 MPRPKDWDKDVMDAIQMLLWYIPNIDSVQSFSDDLIRSKAFENLTFAYVLDCLGMSEKDV LFIRPGGEIFDEYWDYYQGEICTSCQKIILVRQKNKTKTEDLLRCIRNAVAHGDFTVVGD MFVGFNEHKGEKKAIIKIKPKNLIRALSNISIQGEYNKVRLIDATLRKNGFKTQIEPKII DKETKRFYYLDILAEKNGLKYIIEIKDISYKTYLKVHEFMEILASVEKYRKALDQENTKL VLVMDETRLTKDCWEMAAGFDDLIVIDLNKLINMPETVKEIFA >gi|229269866|gb|GG666045.1| GENE 382 385286 - 385762 556 158 aa, chain - ## HITS:1 COG:no KEGG:Apre_1097 NR:ns ## KEGG: Apre_1097 # Name: not_defined # Def: thioesterase superfamily protein # Organism: A.prevotii # Pathway: not_defined # 3 158 4 159 159 220 71.0 1e-56 MNKKIAIQDTYGERFQYCWGCGPKNEEGLHLKSYPTEDGKQVVAKVKPAKAFTGGVPNNL FGGMIAMIFDCHGTASAAFFKHKSKGLELMEDTVIERFITAHLEIDFKKPTPMDEEVEVV ASLEELGDRKAIVNMVLTCKDEVRAKAKMVAVAVKDNM >gi|229269866|gb|GG666045.1| GENE 383 386089 - 386514 452 141 aa, chain - ## HITS:1 COG:FN1602 KEGG:ns NR:ns ## COG: FN1602 COG1683 # Protein_GI_number: 19704923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 141 5 147 156 125 46.0 2e-29 MKIGVSACLLGENCKYNGKNNFSSKLEEILKNHDLVAICPEVLGGLPTPRDPAEIVGEIV RTKDGRSVDDEFKKGAKKALELIKRSKVELVVLQSRSPSCGIGKIYDGSFTGKLINGDGI FVKLLKEEGIKAIDVEDLTNI >gi|229269866|gb|GG666045.1| GENE 384 386671 - 388059 1479 462 aa, chain + ## HITS:1 COG:NMB1707 KEGG:ns NR:ns ## COG: NMB1707 COG0733 # Protein_GI_number: 15677555 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Neisseria meningitidis MC58 # 1 460 1 445 445 222 34.0 1e-57 MKEHKGFTGQLGFVLAAAGSAVGVGNLWRFPYLAAKDGGGVFLIIYLALIFTVGFVLLTT DLAIGRKTGKSAIYAYQSMHSKWKFLGIFTFFVPVIIMTYYAVIGGWILNYIKYFLTGDM KLAAEDACFTNFISSNASVYCSLIFMVMTALIVFGGVEKGIERVSKIIMPILLIMVVGIA IFSLTLKSSGENDEIRTGLQGLAVYLKPDFTGMTLSRFLQISLDAMSQLFFSLSVSMGIM ITYGSYVKKDVDLSKSVSVIEIMDTAVAMLAGVMIIPAVYVFLGVEGMSAGPGLMFISLP KVFFQMGPAGRIIGLIFFILAAFAALTSCISVLESIVANTIEILGTERKSTTLVLSVIYL IATAVIALGYSKFYVEVSLPNGSTGQLLDIMDYISNSFMMPLIAFLSSIFIGWIMKPQWI IDEVEYGGKKFAKKGLYVVMTKYFLPVIMFVLFLISTGIFTY >gi|229269866|gb|GG666045.1| GENE 385 388086 - 388508 428 140 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485112|ref|ZP_03915428.1| ## NR: gi|227485112|ref|ZP_03915428.1| hypothetical protein HMPREF0072_0515 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0515 [Anaerococcus lactolyticus ATCC 51172] # 1 140 1 140 140 235 100.0 8e-61 MEYLIILIFLAFAIHNLRESKGKKIRIDIRPIYNIILVIAGILYLALAYKIGRGIESGIA AISALFYLWTIIYCQGIGQDGFYVLLGKSTIRKIEISNIRDIKIDKENYKLEFYADSTIY KQKYKKEDFPKVLEIIGKFK >gi|229269866|gb|GG666045.1| GENE 386 388607 - 389662 1293 351 aa, chain + ## HITS:1 COG:PA1188 KEGG:ns NR:ns ## COG: PA1188 COG1804 # Protein_GI_number: 15596385 # Func_class: C Energy production and conversion # Function: Predicted acyl-CoA transferases/carnitine dehydratase # Organism: Pseudomonas aeruginosa # 4 350 5 351 393 309 42.0 6e-84 MNLLNNLKILDFTTLLPGPYATWMLAEMGAVVLKISAPGRKDLVLDSEPLAKNGLSANRA WLNNKKKEIFLNLKEEASQKEIIRLIKEEGYNCIIEQFRPGVMAKFGLAYEDIKKVQSDI LYLSLTGYGQNGPYKDRAGHDINFLALSGIMGHSGRKDGGPVLYGMQVADMAAAQNAIIG ILAALNKRNATGNGSYIDVSILDSVIAYNTMTGAGLMMTGMNPGREENSLNGGSLYDFYQ TKDDKYLSFGALEPKFFEKFCKLIGKEEWIVAGCLCPDYKEKKEILREIFKEKTRDEWVN IFDGADCCIEPVLDLKEALLTSKNTKLRKTIETINIDGEDICVYTNPIKFK >gi|229269866|gb|GG666045.1| GENE 387 389749 - 391401 1510 550 aa, chain + ## HITS:1 COG:BH2384 KEGG:ns NR:ns ## COG: BH2384 COG0513 # Protein_GI_number: 15614947 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Bacillus halodurans # 10 549 1 525 539 409 42.0 1e-114 MTAAFFIELVKEKIVEFKELYISEETLRAIADMGFKSPSPIQEETIPPLLDGKDVIGQAQ TGTGKTAAFAIPIIEKIEANGLTQALVLCPTRELCIQVAKEIGNLAKYHTGIKILSVYGG TQIVKQIKALKKGVEIVVGTPGRLMDLMRRRVLKLDNLKIVVLDEADEMFDMGFRDDMKF ILDATNDDRQTCFFSATMGKEISEFSKIYQKNPVTIKIKAKELTVNKIDQHFIKLKEADK EETLTRLLEINKPRLAIIFCNTKRKVDKLVESLSKKSYLVDGLHGDLKQTQRDIVMKKFR NNTIDILVATDVAARGLDVDDVDMVINYDLPQLDEYYVHRIGRTARAGRSGLSYSLISGR DNERLKAIEKYTKATIKQAQIPSLVQMDRNLETGVIDDIIEKLENYTGVEREKSILIRLM EKGYDPFVISQVLLSDKLNKDNLDHHEKIAGVDTPKEKSTANKKKSNKYKDENMTTLFLN RGKMDNFTKDKIIKALNRLAHVPNKKIGQIRIQKSYSFVDVEKSVVYECIRTMNNKKIAG KKLKIEESQN >gi|229269866|gb|GG666045.1| GENE 388 391453 - 391773 372 106 aa, chain - ## HITS:1 COG:no KEGG:Apre_1084 NR:ns ## KEGG: Apre_1084 # Name: not_defined # Def: glutaredoxin # Organism: A.prevotii # Pathway: not_defined # 1 101 1 101 103 170 90.0 2e-41 MRKEIKREWDFELYFKPDCPFCLKVLNFFKENDIIKFPSYNTEDITSGYENQDKLIAVGG KIQVPCMVIDGKAMYESDDIIAYAKENFLEKAKENKAKRKEILKTE >gi|229269866|gb|GG666045.1| GENE 389 391833 - 392270 392 145 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485116|ref|ZP_03915432.1| ## NR: gi|227485116|ref|ZP_03915432.1| hypothetical protein HMPREF0072_0519 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0519 [Anaerococcus lactolyticus ATCC 51172] # 1 145 1 145 145 266 100.0 3e-70 MTNLDIFLIDYEIYKANPNWWLDITEIFLKPGLIFKASFNNEHTNILEKISAYGSDLSIS FEKNVLGVEGIINEEMIRDFKASYKVKNGDGIDYYSPFISLEIGENYCSAHHGSELYLSN LSEDELEKIYKIINPLDQYLKFDIS >gi|229269866|gb|GG666045.1| GENE 390 392277 - 392945 658 222 aa, chain - ## HITS:1 COG:no KEGG:lhv_1650 NR:ns ## KEGG: lhv_1650 # Name: not_defined # Def: hypothetical protein # Organism: L.helveticus # Pathway: not_defined # 5 219 13 224 445 89 28.0 7e-17 MKEIFKEFSEVKGEYVEEIAGQSRFAYSISNSDDLFEIEETVKIVGFYKGNEICFYDYKT SEIYRPFDLKKNIAYGRVIFIDNSFYILQVDFDEGLANIYKYYPGEILEKITDYKVKDLS TYNLELVGLDLHLISQDSETLEIYYPYRKTIKLEVSESALFIDDGKVYINRWIEEGWDDE KDEAGEDYKYYDKLIIKDFDSNIIEERLGSLHQSPDGTWWLA >gi|229269866|gb|GG666045.1| GENE 391 392942 - 393310 394 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485118|ref|ZP_03915434.1| ## NR: gi|227485118|ref|ZP_03915434.1| hypothetical protein HMPREF0072_0521 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0521 [Anaerococcus lactolyticus ATCC 51172] # 1 122 1 122 122 224 100.0 1e-57 MSIEETREFYRDFDDLCDCAYCRKYIREIKKSYPDLTEYLNKLGVDIEKPFETMPGEPEN RFIDYFSVQYLVMGDKKEFSKEKLGDVTIDLAEDYPDPNLDCKYYVIELGPIKLEWTNEG EI >gi|229269866|gb|GG666045.1| GENE 392 393459 - 393866 302 135 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0945 NR:ns ## KEGG: HMPREF0424_0945 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 131 1 132 146 105 54.0 6e-22 MKVKKRTLLLIAGLVWLIAGFNVARLGILSFGLVEKIWYLYALTILIFMIFGRMFFTMSE KHTKRILAYEDKRPFWNFFDLKSYLIMVFMMTMGIGLRKANILPEFFIAFFYTGLGLALA LAGIIFIYNYIFIKN >gi|229269866|gb|GG666045.1| GENE 393 393901 - 394218 267 105 aa, chain - ## HITS:1 COG:no KEGG:TepRe1_2333 NR:ns ## KEGG: TepRe1_2333 # Name: not_defined # Def: hypothetical protein # Organism: Tepidanaerobacter_Re1 # Pathway: not_defined # 1 104 1 104 106 87 53.0 2e-16 MEKLKQMLPYLLIMIGIFYILPMLIIDTGSGMFILLVLVPLACLLTSLAYGFKNSFTLTF PILVMLIFIPSIFIFYNDSAIVYVFAYGAISLVGSFLGASLSGKI >gi|229269866|gb|GG666045.1| GENE 394 394317 - 395330 1175 337 aa, chain + ## HITS:1 COG:MJ1357 KEGG:ns NR:ns ## COG: MJ1357 COG1226 # Protein_GI_number: 15669547 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Methanococcus jannaschii # 1 330 1 335 343 184 34.0 1e-46 MEEKRKLKLIIGAFVFLLVVGVLGYMVLLKVDFVDALYMTVITISTVGFGEVGTTSDASE LFSILMIFLGVGIVGYTFTTVVAMFVEGKLGDLWKGSKMDKKISALTNHYIICGSGELAE VIINKFIKEKLDFVVITNNRVDLDDYSHHDILVVEGQSTEESVLDHAGIMRAKGLISTLD TEVDNIVTVLTARNMNKDIYIISNSITKSGSDKLMKVGANKTLSATEISGKRMASLMIRP NIMSFLDVVTKVGDVELDLEEVIVKRGSYLENKNLIEAQIPNKTGLIVLAIKKFEDGKMI FNPHGSYTFKIGDVLIVLGQEEQVDKLRNLGDESKNV >gi|229269866|gb|GG666045.1| GENE 395 395368 - 395619 317 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485122|ref|ZP_03915438.1| ## NR: gi|227485122|ref|ZP_03915438.1| hypothetical protein HMPREF0072_0525 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0525 [Anaerococcus lactolyticus ATCC 51172] # 1 83 1 83 83 153 100.0 5e-36 MKKNELSSEDLHFLNVSSENFKKGQSFKDYKKDIKRWLMICPRSYSSEDADETIEKYKVE ISKAHYNEVPVADIACDIGYCCG >gi|229269866|gb|GG666045.1| GENE 396 395786 - 396208 418 140 aa, chain - ## HITS:1 COG:L84767 KEGG:ns NR:ns ## COG: L84767 COG1321 # Protein_GI_number: 15673238 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Lactococcus lactis # 5 136 1 134 217 88 38.0 4e-18 MDYEVKMNSIRQDYIQAIYRLSKDKGYTNNKNISDYFSISRPSVSEMIKKLIEDGLVIQE KTKIYLSDLGDKEAKAILSKHRIWECFLVDVLGLNGGIVHDQSDLLEHVTSEEMFTALNK FLDYPKKSPKGKRIYTNENK >gi|229269866|gb|GG666045.1| GENE 397 396198 - 397331 1035 377 aa, chain - ## HITS:1 COG:TP0166 KEGG:ns NR:ns ## COG: TP0166 COG1108 # Protein_GI_number: 15639159 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Treponema pallidum # 25 333 15 324 367 216 42.0 7e-56 MMDFLSYCFIDNYQTLLVLLVTAIACSLIGVFLVLRRLSMLADAISHSILLGIVIAYFIV REITSVYLVFGAAIFGVITVFSIESLSKTKLVKNDDAVGIVFPMFFALAVILITKYARNV HLDVDVVLMGEVIMAPLNTMNFFGVEIPKSLLQMSVMGILNLAFIVVFYKELKLTTFDTE FAKIAGFSEVLLFYGLMTLTSFTTVVAFEAVGAILVISFLIAPAASAYLISKNLRTMIII SVLYAIINSILGFVLAMYYNLSMSGMSATMAGISFLITFLFNKNGFLMKIITRKKKHIEF KKDAFLIHVGNHQSKKDSKEELGLATIYRHLSWKKEDIEKYSQILISENKILVDEGIYKL TEKGRILYISLLKDYGL >gi|229269866|gb|GG666045.1| GENE 398 397315 - 398193 791 292 aa, chain - ## HITS:1 COG:BS_ytgC KEGG:ns NR:ns ## COG: BS_ytgC COG1108 # Protein_GI_number: 16080127 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Bacillus subtilis # 12 285 17 288 435 187 41.0 2e-47 MDIFRNYSFIIVALGTVILAMATGIIGSISVLKGKSLIGDAIGHSTYPGIVLAFMLSMEK SPIILLLGAAIAGAISFFLIDIIANNSKIDLDATLAIVLSSFFGFGMVLKSFIQGNPTYA GVSQSGLKNYIFGQASYIMRNDVKIIFVVSIFSLLLLLAFYKEIKVYVFDEVYAKTIGIN PVLMNTVILLATMLLITTGLKLVGAILISSMLIVPAITALQWTDKFHVMLIIAGLCGGIS AFVGTYISTVYDGMSTGSTIILIMSFISLISMVVGPRGMRKMIVRKNYDGLS >gi|229269866|gb|GG666045.1| GENE 399 398198 - 398908 252 236 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|225084369|ref|YP_002657150.1| ribosomal protein S16 [gamma proteobacterium NOR51-B] # 6 216 9 218 309 101 31 4e-20 MKDVIIKVEDMTIAYADKPVLWDNDIDIINNSITAIIGPNGAGKSTLIKGILNLQKKLSG SVLIMGKPFDEVKKKIAYIPQTASVNWDFPTTVLDVVLMGRYVHLGWLKRPTKDDYVLAR KALEKIGMQDFEDRQISELSGGQRQRVFIARAIAQDADIYFMDEPLAGVDKVTEKVIFDF MKDSQMKGKTSIVVHHDLNTIEKYFDHIIILNKKVIAQGPVSEAFTKENVDKAFVR >gi|229269866|gb|GG666045.1| GENE 400 398917 - 399858 1111 313 aa, chain - ## HITS:1 COG:FN0668 KEGG:ns NR:ns ## COG: FN0668 COG0803 # Protein_GI_number: 19704003 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Fusobacterium nucleatum # 4 313 6 312 312 209 40.0 7e-54 MKFKKILMALAMLIIASSCSKNVNKTDSDATKQGDGKKIVTVTTSFLYDMVGNLVGDKVD RELIIPAGEDPHLYTAKPQDLEKIKKADLLLYHGLHFEGKMVDVLEKKGSAVSRTFKKED IGEMEEGGKVVVDPHFWFSINLYKEATKNAAEDLEKLLPEEKDNIEKNLETYLAKLDDLD KENKEKINSIPEASRYLITPHDAFNYFSRAYKIPVKAPQGVSTDSEVANKDIEDTVNFIV KNKVKAIFAESTTDPMRMEKLREAVKAKGFDVKVVSGEGKELFSDSLAPEGQPGDTYIDM YKHNVDLIVENLK >gi|229269866|gb|GG666045.1| GENE 401 400056 - 400940 420 294 aa, chain - ## HITS:1 COG:no KEGG:FMG_1369 NR:ns ## KEGG: FMG_1369 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 290 10 299 301 363 69.0 6e-99 MICYFIVFLLVYDIYKSKKYREYGLLISGALAGFSLELLAVRLTDIYHYSDDFFISIGFR PYQFPFFGGLMWGGITVCALRIARKFNFSKLMTALLAGWLIVSMDLLLDVVAIRLDGGFW VWDGREINLDINHHILMSVIWVNFLGYMFEVPSIVYMTLKSWENENDKAKINIGKSLLIG AGGVIFVGICSYISLFLDKISDEWFSFLAFSLIWTFFFIKLLAKLIKNREKISLSKKKDW TLIIFWTALYTYCIEGLIKLGIIPALPIYGIITIFLFVLTIFLSIINIENGVTR >gi|229269866|gb|GG666045.1| GENE 402 401039 - 403216 1621 725 aa, chain - ## HITS:1 COG:no KEGG:Swol_2224 NR:ns ## KEGG: Swol_2224 # Name: not_defined # Def: hypothetical protein # Organism: S.wolfei # Pathway: not_defined # 3 724 5 787 793 702 49.0 0 MDNNLDIEYKIIPYDDKSKIEEFDLDEIIFDLDSELDLLESKADKLDYLIAIASGLICGM LDILWVKDFDFARGRELANNKVEGFVKKTAELVEGKKFENLGDAVRALEKRFPIPADGNT IDFGGGLQHHLRDFAHHPTIAGLSFSLLTQFTEKSYGTDVTGKFIIFDVAENSKAFIGDN LGEKLIKGTLTWFFHLVSDMAGSSVTAGLSGGTGIPGPILSLAKEISVLPFFNKINIKDD MSLSVFLSKLFNGTLLMKRDEKGQIIKDSVYRFDLRAEFGIALELGKQAVPVLANECIVR GFYFIRHFALAMKEIKVSSFKDMRKIDWNLVKPVDNPTISRMLTISTGVFTGLDLGEAIL TQKYWLSINYVGVGRFALAISTDLSYGLKKRNLKKIRTAYEKIQRQTLINPTNQEMGVKP SGDMNKLGLSLEQAEILFNIEYLIVLNDIENTNNFIVRGKAFDLKIKWLAEWKQIITKKF ETFTQVPGAVMNWYSQDKLEEKIIKLNPTKAWFRLVLLESMLFEPYYPLKAVKNKKDKYV LSKRYNSLNNPINRFNKEKASLFLNEQFTGMYCEEGYVDRLRKSFNKQIRNLNLFFKLDI KKLSQISGIAAIGFLGFGFTGALTAVVVQGKKSAIIEAAKLLTSIREIFLDDDKDLEFSI KVLEKYTESITKIEKNLVDLRLKRGSLDSKEKSDNEKQIKNLEENVVVMKIARKIMIKMN NEFKY >gi|229269866|gb|GG666045.1| GENE 403 403710 - 405530 1391 606 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485130|ref|ZP_03915446.1| ## NR: gi|227485130|ref|ZP_03915446.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 606 1 606 606 872 100.0 0 MKTKKYIIYILALAAIFTNGTTYASQIDKENTRIPNYNSQNFSLNSEDSLREIQNKKENL LKLIEEIKTSPNYINSSEEIKLLYDNSIIFNSNSMQKDNTEWIAYSLNNLKEDIDTIENL INGNFIEKENINQDSLFFNNPKYKIPYLKISKEKQDILDELVKNNNEKNPLSISNLNNSN NQDLLIFFSDWLYPFIDDTDKDGVITNSQALLDSIRANKDLFESYRNTNFDLRYKLENNS LNNNNTRIENLTLMNLLTMSSKTNLLGDERTFSSDNNKDIDLELSNKSSETLLTPETIIL GENNHIDAPNSKSCKIISSNIEKTNEFKSFNTEDDDLINTSKADNSIFATHKKTKEAYAK LSDWQKQKLNEMNTDGKYPLTIAEVKKSGEFTIPVKSDVWIYPFMIDINNNDEEDYIVNK SLTDGSIFSTHSKTSEAYAKLTDEQKQILNTINTDGKYPLTIAEVKNSGLFPIPVKNTVW IYPFMIDRNNSGEVGEYDGEFDNIEPSDNTNPSPELIAIDEITNGSEIIDNNVLTNSSEF INNSAIKNSPVTYTSAEPTTRYEVVSKQNVKTGIKGLRLIIIILIISILAYYSSKKYSQK SKNNNH >gi|229269866|gb|GG666045.1| GENE 404 405931 - 408189 1028 752 aa, chain - ## HITS:1 COG:Cgl0713 KEGG:ns NR:ns ## COG: Cgl0713 COG1479 # Protein_GI_number: 19551963 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 36 637 127 726 811 379 36.0 1e-104 MYNLIKFEIVRSRDTLLDKQIYEDFLVDKYQPEETRIKLKPVKNDQKAFGKLFNDVNEYI RESNLTTNYNYFFERIQKQEISIDELFDAICRLEIINITLNNEDNPQLIFESLNSTGLDL SEGDKIRNFILMGLPSKEQDEYYEKYWNRIEEFTKYNVSSFVRDYLSVKQLAIPSQKKIY ISFKDYVDRQSIETEDLLKDLLAYAKRYEILLCGGTKNRTLDSSIYRLNRLETTVTRPFF LEVLRLYDENKLDIADIAEIFLITENYLFRRTICDLPTNALNKIFLILHREITRYEGNDV GYVEKFKYALLSKKEKARFPDDDEFAERFTGRQIYQMNSKNKIYIMERLENYSTLEDKDV YGHFDDGTYSIEHIMPQHLIPAWVKAIGEDYEEIHKLWLHRIANLTLTAYNSKYSNSTFE EKKTMKNGFEDSGIRMNTYIAKKDKWTLAELEERNQYLMGRALEIWALPTSTFKPAEKLM DSYTLDDDTSLSGRLIARFSYKNTEQPVSSWVEMFQKVLQILYSEDKSVITRLAVSKDGS VAQHFTMNVEDFKKSVEIGDGIYVWTNSSTQSKLSVLNRVFKLYDSDPSDLVFYLRDDIE STEEETETRYEIRRKYWTYALGFIKEAHREGGSFTNVNASKNNWISGFFGISGFNISCIA NYDFARVDLFLGKAKKEENKKAFDMLMTHKDDIENTLGVSLIWYRGDDIKSSKISYQLNG VSIKNETDWLKMARFHVGWSKKFYDVIVPYLG >gi|229269866|gb|GG666045.1| GENE 405 408770 - 409378 435 202 aa, chain - ## HITS:1 COG:no KEGG:TDE0462 NR:ns ## KEGG: TDE0462 # Name: not_defined # Def: metallo-beta-lactamase family protein # Organism: T.denticola # Pathway: not_defined # 2 124 17 143 269 109 46.0 5e-23 MRGKYYCKPEETGILAEGVSCIREYDVNMWFYTKNGKTIAVDSGHLNFKNIGDEFQKINI RPENINHLFLTHLDTDHGGGIDKSGHNIFPNAHVYMGEDEKKYMTKEIRRKGIFYNCVEI ADGWTPISGNMIFDVDGVRVEAIRQIVALKEDTSEYVRKSVGNALRDISKKFPELIKAEL SNWKLESKEINQVYKLASKLVR >gi|229269866|gb|GG666045.1| GENE 406 409480 - 410094 519 204 aa, chain - ## HITS:1 COG:CAC0567 KEGG:ns NR:ns ## COG: CAC0567 COG0500 # Protein_GI_number: 15893857 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 18 184 19 189 209 129 41.0 4e-30 MLKRFFENVIKPKNNFGGRFMVKGMNIGHEKLASWGRSFLNITSTDTLLDLGCGGGRNIQ YFLTKANKVYGIDYSMASVDIARILNDKDIKDGRCQIIEGDVKNIPFDEKTIDIVTAFET IYFWKDIEACFREIHRVLKDGGEFLIVNEGAYREHKNIKKWADMLNFEVYSPEYLTNILT SIGFACEYHLDNKSHLAFIAKKIL >gi|229269866|gb|GG666045.1| GENE 407 410419 - 418140 5243 2573 aa, chain - ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1386 2294 2 875 1315 395 29.0 1e-109 MRINDFHNILELIKQDILQSEAEYLKLLKVVGNNQRYDFRSQLSIYDKNPEATACAKFDY WRERFNRTVMRGQKGIPILEDYGTYKKVDYIFDISQTVSKNRDVNEVNLWRFDKEAHRDV LKEMIKAEGYEESESTLENIFSLSRLYGDEKIDSLMNELRISDEDRIAFTKFVRNSVSYA VAARFKLDYPIDTELLKENFAMLDSISLMSLGETVSDISGTVIDTTIQKSKELELQKEVL RGKEAGYNKIREELEEVEENVLRRDDQERISENERIFRNGEYGRDNRENQREYTESVRGR DGLYEGISESDLRSDEAGLSFKQRGAEPLRDVSGSIQGEEIDQTPDGYSKTGDRIYEDGE AKIDGSLEDRGREPSTVPSDDFSTQRNYHQGSSGNLKENTDKEIREADKASFSLPENRSG QIKLTIPLTQNEIDSILINGGNHEGGRLPIIAEFSKGKTVEELGEYLKGTFRGGNGLFLN EAEVSSWYSDKGIHLAYETSAREDSTQILSWSDAARRINELLENGEFATNVELSEAQDYE RDRVSESLWYLYHDLSEEGKAQGYFDFIERGGGFPKETRQLSEALKNPDYLKNVISKYSR FLTGYKENKDVLRFHYHKVDSLYQKLQELELPRKEYTSNLTELPKVQGFITEDEVLDTIS RGSGVSQGKERITKFFKENHTLQEKANFLKDEYGIGGHSHAVSGAKGSDEWYDAKGLKLQ KNHCNDVFLTWSNVAKHVDELLSKNLYLEENKIESKTAIEEQKEPSYYSKDDPYNLMTDE MLEKVPELYAHEDVALADKQVHAAYIIPFRSNWTWYMTEYDRKSKDAFGLVLGIEPEWGY FNLEELKELNAQRLVLEDFPKTFRELKDSELKKQMDEQELQSVFNGELSFEDKVELEAPE EVEESIQAEPFQATLFDYLKEREEVELNEKEESLSDEFAVKEGDTVYFHHEEYKVREISK NEITGRNDLWLDPVRQGNHQIPIISFTDDEDLLRQISLERPDFIIGDEVKYKGKDYTITR FDDMGNNLKTVTVKDNTEYLGGMITGSDVIPYRKESELDKIFENLTNEKPEKTFEEVEIK KNEAHNFKITEETLPAKLSPSERLNNNLEAISMLNRVESGERELDITAQEVLAKYVGWGG LSEVFDESKDGQWKEARAFLKENLSSSEYEAARDSTLTSFYTPKTVIDGVYKTLSGMGFK QGNILEPSMGIGNFIGNLPDEMNKSKFYGVELDSVSGRIGKLLYPESDIQVKGLEETGFS NNFFDVAIGNVPFGEYKVNDREYNRNNFLIHDYFFAKSIDKVRNGGVIAFITSSGTMDKK DESVRRYLAARTEFIGAIRLPNDTFKGVAGTEVTSDIIFLKKRDSVLERDEDWIHLAEDE NGLSYNKYFVDHPEQVLGSMREVSGRFGKTLTCEPIAYLGTEINMASLKERIEIAGERIS KEAKYEEIELLDDEITSIPATDDVKNFSYTLIDDEVYYRENSLFIKKEVSDKNKEKIKDY LELNAALKDVIYKQKEDFNEEEIKASQEKLNEVYDNFSKKHGFVNNLSNTRALKEDSNFP LVSSIEILDEEENFKAKGDIFSKRTITKAKIIDHVDTSLEALVLSVSEKGYVDFDYMGSL TGKDRPTLIEELRGEIYLNIREEQNFYRPLSFNLEDEDLPFACANGSNSYKYSYVTKDEY LSGNIRDKIAIVDSYLSKLRQTERELPHLGYEENGKEKELISYEMNRLEYQKAELTKVLP KELEASEINVRLGATWIPIKDIEKFIFETLKTPGYARWDIKVKFSNLTSEWNVEGKSRDR GNDLAEMTFGTSRVNAYKLIEDALNLKETKVFDQIVNPDGSKTSVLNKKETMLAGQKQEL LKEEFKNWIFNDQERRSRLVKLYNERFNSIRNREYDGSNLSFEGMNTEIDLRPHQRNAIA RSLYGGNTLLAHVVGSGKTFEMVASAMESKRLGMCSKSLFVVPNHLTGQIGREFMQLYPS ANIMVADKKDFEPKNRKRFIGKIATGEYDAVVIGHTQFEKIPMSKEYQEKHIQDQIDEIV NYVEEYKHDRNQNFTVKQLEKTKKKLETRLEKLNDDFKKDDVITFEELGVDKLFVDEAHG FKNLYLYTKMRNVAGIGQSEAFKSSDMFMKCRYMDEMTGGKGVVFATGTPVSNSMTELYT MQRYLQYESLKKNNLEHFDSWASTFGETQSSFELSPEGTGYRVKTRFSKFYNLPELMSMF KEVADIQTADMLNLPTPEANYEVIKTEPSEEQKEILKSLSERADDVRNRVVEPDVDNMLK IAQGNHEPLIDDELWNTVQEKRKSQAKKYEKINRGKDERIHILSNLIKCPYCSAGLYGNK SRKRNKNKEGEHYKDYYYYGCKHRQMMNGHKCTFNKQIRAELIEKEVETIITQIVSNPTF AKKIEEKINIQIDTKEIDEVINKHLAKIRQLTGTKASLINQIDSLNFEDKHYDRKYTDLN LRLDAIYDQLEYAEMQLNDSRKRKEAILEDKITSDNIYKILVNFNSLYTVLSDIDKKRLL NELIEEIQIYDEKTEKSTWIKSVVFKLPLIDYDIDFSLDNKDNVEALTLLSRD >gi|229269866|gb|GG666045.1| GENE 408 418225 - 419652 895 475 aa, chain - ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 1 475 1 476 477 722 77.0 0 MTIDEIKKLIQNGEKIDVEFKESRNALTKDVFDTVCSFNNRNGGHILLGVNDKRDIVGVS EDKVDKVIKEFTTSINNSQKMYPPLYLLPEVFEIDSKKVIYIRVPEGYQVCRHNGRIWDR SYEGDINITDHAELVYKLYARKQGSYFVNKVYPNLDIDFLDASVIAKAKRMAVARNKNHV WENMSDEELLRSANLILTDPETKLEGITLAAILLFGKDNSIMSVLPQHKTDAIFRVENKD RYDDRDVVITNLIDSYDRLIAFGQKHLNDLFVLDGIVNVNARDRILREIVSNTLAHRDYS SGFPAKMIIDDEKITIENSNLAHGIGALDLQKFEPFPKNPAISKVFREIGLADELGSGMR NTYKYTRLYSGAFPLFEEGNIFRTIIPLKKIATQKVGGNGVAQDVAHSVAQDVAHDKIAL VEFIKEKIRENDKITRKTIADEAGVSVKTIERTIKEIDNLRYIGSGSNGHWELTE >gi|229269866|gb|GG666045.1| GENE 409 419672 - 419851 114 59 aa, chain - ## HITS:1 COG:no KEGG:SZO_12650 NR:ns ## KEGG: SZO_12650 # Name: not_defined # Def: regulatory protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 59 1 59 59 85 86.0 9e-16 MKDTFMDTAKVMSKGQVTIPKRIRELLDLQNGDYVTFVVNNDKVQIQNSKIFIEENIDK >gi|229269866|gb|GG666045.1| GENE 410 419935 - 421641 1284 568 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 568 5 596 709 416 43.0 1e-116 MKLVIAEKPSVAISIAKVIGATKKKDGYYEGNGYKVSWCVGHLIQMANPDSYDEKYAKWN MADLPIIPKEYKYEIAKSTKKQFTILKKLMNDKDIDIVINACDAGREGEAIFRLVYNQAN CKKKMKRLWISSMEDSAIKEGFDNLKDGSSYDNLFESAQARAIADWIVGMNLSRLYSCLY KQNYSVGRVQTPTLAMIVNRDDEIANFKKEKYYTVELSLNDFTLSTDRIDDEVTAEQLLN LVGDKIEITDVIQKEKITKPDLPFDLTTLQRECNKYFGYSAKQTLDYAQSLYEKKLITYP RTDSRFLTEDMIVSTVNNILGKNDFDTGRIKTVFNSKKVTDHHAIIPTESSMNEDLTSLP ESELKVYELILNKLHASVGYPLIENAMKIVAEFDSFTFTSSGKTIKDEGFTKYLKEYKSK KNEDMALPDVNIGDVLSIENKEIKEKYTQPAKHFTEDLLLKAMELAGNDALEKGVEVERK GLGTPATRAGIIENLIFKGFVERDKKNLIATHKGISLVTIVADTFKSAETTAKWEMELSD IAQGKSSKKNFLEAIETEIKEVVSTYIK >gi|229269866|gb|GG666045.1| GENE 411 421740 - 423929 1920 729 aa, chain - ## HITS:1 COG:no KEGG:CD1858 NR:ns ## KEGG: CD1858 # Name: not_defined # Def: putative cell surface protein # Organism: C.difficile # Pathway: not_defined # 272 729 52 523 523 496 75.0 1e-138 MKTSLKNKRITAIVVAFTLLMGGVLGVLKVGAKTVFASNEPPEKYETYYELKFEDHTSDD TFRGFYYVGKENKEGQPLNFKFSLSKSFEEKGGVVVDKYNETFTNENMDKENQLDDLIYM TKKTYPYYRIHNVGTGAFTSIVSPRDKDNYYIGDITENAEERTVKGKKANVIVYTCPVLQ INRKIEKVTVDYEGELKEETKNSIIGRVKEANPNINNVKEIKIVKDKLIIETWNRFHTGV PYLELPLEDLYKRVANASAQTDNKDTKNQESQTKSKVKVKYKYQDGKVYKEYSAFFDKNQ MIDASDLEMLPDNMSFNDDFVSYTVKGDGSDSIIRIVKKLESNAQTQTEKPKTEDKGTQT ELSKDDISKMEKESKELQEKLDKLSQEIKDKDKLSDKQKEKIKDLEEKIDKLKEKLEKGK DDKDLSADMKKEIEKLTEKIKELEKKTNEVGKATVTHNPTVTPISPISGMKTGTGNFPQT SVSDTGKGSSSQDNTGKITKDTNVGKTDGKEKEVRYPNKLTPKQPANNSSQDSSMDGSSK NVNTNKGVASAPSKARGTVTENKDNANKDYPIHHGDSSDKKETDMYSADARQFVTFTTKN GKTFHLIINHDEDSENVMLLTEVSEDDLLNMVEKKEAPKQEIKKEEPEKEEPKPVKKEES SNMGTYLILILVVAGALGAGYYFKVVKKKEDKELEGFEEEDDDFFSEAEESENETDETET EDKEDDELE >gi|229269866|gb|GG666045.1| GENE 412 423907 - 424143 146 78 aa, chain - ## HITS:1 COG:no KEGG:SZO_12840 NR:ns ## KEGG: SZO_12840 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 78 1 78 79 79 93.0 4e-14 MKKELTAVKNRIKKLRDKKALIDEELEPLFIREEELENEEIIAICRKNNITISDLMAKVN REKAEVKKEKTNENQFEK >gi|229269866|gb|GG666045.1| GENE 413 424156 - 426315 1474 719 aa, chain - ## HITS:1 COG:no KEGG:SEQ_0743 NR:ns ## KEGG: SEQ_0743 # Name: not_defined # Def: membrane protein # Organism: S.equi_equi # Pathway: not_defined # 1 719 1 707 707 1028 80.0 0 MGKKLKKDFKERQRARIEKERLQSNSSIGPEENKLKHNDDYRGKIVHDKDRFQDKVHEKV SKRSAETELNGKTSKRNARYRASDKDSVASVAETEGVSQKEIGKADYITEVKDGKIYDPL GKDLDNDGIIDRYDNDFRDSDYFESTYDVEDNLHRKAEDTKGFSKSQKAQKKKYKRKNYS DKLYTRKKDKESKEEKADNKKSGKEAILDREKKNRLSKEQERTFRDKASKVSALSGLAKG SETVRDYLSHGSDENQGVEAGEKTADTSSKLIHGIKNYSDKKRAKKGYDLTNKDYKIRKR KSKLEFRDAKEELKKTQEYQKANNFKRFQKRKQMKDSIKRQNKSRLRDRIKEGLIGSLKS SKEVILRKAKGLMIIFIGLIILGTFFINFAGTGMTGFMNSTSSVLTTSYLSKPNVLNEIN QNFSAMESELQNEVDHVKENYPGYDEYILNNTEYIGHNVHELLSYITSRCGEVKNVSEVS SVLNELFKSMYDLEYKEEVEIRYRTVTDTYTDEDGNEYTESHEEPYEYKKLIVTLYKKEM DSIIRKIFADYPDNLKHYEALFLAQGNMGEAFGNSDLIASNGGIGGGKEYEASTEVQKKI VNAAYITPSPGAGWCAMWVSQVYQNAGLGYIGGNACDMYRNYTFTSDKSKLKVGMLVAVE SSSSGSSAGLTYGHVGIYIGDGKVIDNIGRIRVTTLDDWIASFCQHHPVGFGFPPNVNR >gi|229269866|gb|GG666045.1| GENE 414 426320 - 428749 933 809 aa, chain - ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 246 779 39 594 617 101 23.0 5e-21 MKDKRKIQQLKLEQNQKKLRSQKQDLKQNKEKSKKDRGGLLDLIFRKEPKRYTVEDTIPY LRLLKSGICQIDEKHFNKSIAFEDINYQLALEEDRDLIFNQFANFLNSFDPSISIEFSYI NQLGRNEEMKSAIQIPDKKDGFDDIRLEFREMLKSQIVKGNNGLKKSKYVTFTVEADNLE QATSKLERLEIDILSSLKSMGVRAESLNGEERLKILHDILNPNKTFEFSYKNLRKRESTK TYIVPDEFNFTPSRYFKFGKFIGAVSHFQILASELSDRMLAEFLDIDDNINISFHIKAID QSEAIKMVKRKNTDIDKMKIEENKKAVRSGYDMDILPSDLITYGEDVKSLLKDLQTRDER MFVVTIIFMNFARTIQKLDNTISQISSIANKHNCKLKRLDHSQEQGLISVLPLGVNKIEI DRGLTSSSTAVFMPFTTEELFINSSNSLYYGLNALSHNLIMADRKKLKNPNGLILGTPGS GKSFSAKREMANAILVTDDDVIICDPEGEYGNLVRQFNGEVIKVSSKSKDYLNPLDINMN YGDGDAPLKDKANFIMSMLELVVGGSGLTAEEKSVIDRCLPKIYERYFENPEPCNMPILQ DLYDMLKGQEEKVGKKLATEMEIYVSGSLNVFNHRSNVDLNKKLLCFDIKELGSQLKKIG MLVIQDQVWNKVSQNRGNKATRYYIDEFHLLLKDEQTASYSVEIWKRFRKWGGIPTGITQ NVKDLLMSKEIENIFDNTDFVLMLNQASGDREILARKLKISQPQLKYVTNSNAGEGLLFF GNTIVPFLDKFPKDTILYQKMTTKPEEVR >gi|229269866|gb|GG666045.1| GENE 415 428661 - 429050 235 129 aa, chain - ## HITS:1 COG:no KEGG:CD1855 NR:ns ## KEGG: CD1855 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 129 1 129 129 198 96.0 6e-50 MAYVPIPKDLKKVKTKVAFNLTKRQLIGFTIAGLIGIPIYLFMRKVVPNDIAVIFLIVST LPIFFITLFEKDGLSFEKYFKYIYLHKFYQPQKRVRKEVYLERQKKDSAAKVRTKPKEVK KSKTGLKAK >gi|229269866|gb|GG666045.1| GENE 416 429054 - 429320 294 88 aa, chain - ## HITS:1 COG:no KEGG:CD1854 NR:ns ## KEGG: CD1854 # Name: not_defined # Def: putative conjugative transposon membrane exported protein # Organism: C.difficile # Pathway: not_defined # 2 88 1 86 86 127 85.0 2e-28 MMNKRKTVLIVVAVGTGILAVMDRIRLHSKVNDLEERTKDIGRCHNDFCLMQERYNRSTD KQIASIQEEIGSVYEHIEELSKDKEDGR >gi|229269866|gb|GG666045.1| GENE 417 429335 - 430198 518 287 aa, chain - ## HITS:1 COG:no KEGG:CDR20291_1789 NR:ns ## KEGG: CDR20291_1789 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile_R20291 # Pathway: not_defined # 1 287 1 287 287 487 97.0 1e-136 MFGIFDKIEEFFKDLLLGGIQANLESMFLDINDKVGAIATDVGKTPMGWNGQVFSFIKSI NDSVIIPIAGLIITAVLCIELINMVMQKNNMHDTDTFEFFKYIIKMWIAVWLVSHAFQFS MAVFDVAQHMVNKAAGVINTSAVISGDQIVTMVEGLKDKGLGELVMILFETSLIKVAIQV ISIVIMLVVYGRMFEIYVYSSVSAIPFATMGNKEWGQIGTNYIKGLFAIGLQGLFLMVCL GIYAVLVKTIQITDIHTSTFTILGYAVLLGLMMLKSGTLAKSVLNAH Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:23:50 2011 Seq name: gi|229269865|gb|GG666046.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD3, whole genome shotgun sequence Length of sequence - 425352 bp Number of predicted genes - 386, with homology - 380 Number of transcription units - 185, operones - 94 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 269 - 343 80.7 # Asn GTT 0 0 + TRNA 385 - 473 72.5 # Leu TAA 0 0 + TRNA 522 - 598 84.3 # Met CAT 0 0 + TRNA 639 - 713 78.0 # Glu TTC 0 0 + TRNA 856 - 931 92.3 # Val TAC 0 0 + TRNA 977 - 1053 85.4 # Asp GTC 0 0 + TRNA 1080 - 1155 89.3 # Thr TGT 0 0 + TRNA 1167 - 1252 68.9 # Tyr GTA 0 0 + TRNA 1257 - 1330 88.0 # Gly TCC 0 0 + TRNA 1364 - 1440 89.5 # Arg TCT 0 0 + TRNA 1515 - 1590 78.6 # Gln TTG 0 0 + TRNA 1595 - 1670 82.7 # Lys TTT 0 0 + TRNA 1809 - 1898 62.9 # Ser TGA 0 0 + TRNA 1919 - 2012 67.8 # Ser GCT 0 0 + TRNA 2018 - 2093 87.4 # Phe GAA 0 0 + TRNA 2132 - 2207 82.5 # Trp CCA 0 0 + TRNA 2249 - 2325 95.0 # Ile GAT 0 0 + TRNA 2390 - 2466 94.9 # Met CAT 0 0 + Prom 3914 - 3973 8.4 2 2 Op 1 . + CDS 3996 - 4769 970 ## Apre_1461 hypothetical protein 3 2 Op 2 . + CDS 4772 - 5449 341 ## COG4912 Predicted DNA alkylation repair enzyme + Prom 5464 - 5523 7.5 4 3 Tu 1 . + CDS 5554 - 7524 2258 ## gi|227486108|ref|ZP_03916424.1| conserved hypothetical protein + Term 7533 - 7568 4.2 + Prom 7921 - 7980 8.7 5 4 Op 1 . + CDS 8020 - 24981 17914 ## FMG_0186 hypothetical protein 6 4 Op 2 . + CDS 24947 - 25219 199 ## - Term 25224 - 25281 8.1 7 5 Tu 1 . - CDS 25425 - 25661 62 ## gi|227486111|ref|ZP_03916427.1| hypothetical protein HMPREF0072_1514 - Prom 25764 - 25823 6.1 + Prom 25350 - 25409 5.6 8 6 Tu 1 . + CDS 25640 - 28096 2970 ## SAG1407 cell wall surface anchor family protein + Term 28325 - 28376 12.2 + Prom 28336 - 28395 12.3 9 7 Tu 1 . + CDS 28613 - 29125 495 ## COG0778 Nitroreductase - Term 29542 - 29577 4.1 10 8 Op 1 . - CDS 29584 - 29820 357 ## gi|227486114|ref|ZP_03916430.1| hypothetical protein HMPREF0072_1517 11 8 Op 2 . - CDS 29834 - 30052 409 ## gi|227486115|ref|ZP_03916431.1| hypothetical protein HMPREF0072_1518 - Prom 30127 - 30186 9.3 + Prom 30024 - 30083 7.7 12 9 Op 1 5/0.000 + CDS 30208 - 30510 396 ## COG0640 Predicted transcriptional regulators 13 9 Op 2 2/0.043 + CDS 30523 - 30747 358 ## COG2217 Cation transport ATPase 14 9 Op 3 . + CDS 30748 - 32598 2041 ## COG2217 Cation transport ATPase + Term 32606 - 32643 5.1 - Term 32654 - 32686 2.0 15 10 Tu 1 . - CDS 32694 - 34067 1021 ## PROTEIN SUPPORTED gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 - Prom 34094 - 34153 12.3 - Term 34144 - 34187 4.0 16 11 Tu 1 . - CDS 34199 - 35026 794 ## COG0561 Predicted hydrolases of the HAD superfamily - Prom 35066 - 35125 4.2 - Term 35086 - 35120 1.1 17 12 Tu 1 . - CDS 35127 - 35603 561 ## Apre_0406 hypothetical protein - Prom 35656 - 35715 6.7 + Prom 35620 - 35679 8.8 18 13 Tu 1 . + CDS 35711 - 36280 808 ## Apre_0405 hypothetical protein + Term 36284 - 36326 5.0 + Prom 36372 - 36431 10.8 19 14 Tu 1 . + CDS 36482 - 37591 1699 ## COG0686 Alanine dehydrogenase - Term 37608 - 37663 3.6 20 15 Tu 1 . - CDS 37690 - 38127 591 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase - Prom 38197 - 38256 7.6 + Prom 38080 - 38139 7.1 21 16 Tu 1 . + CDS 38235 - 39455 1454 ## COG1448 Aspartate/tyrosine/aromatic aminotransferase + Prom 39508 - 39567 4.4 22 17 Op 1 41/0.000 + CDS 39589 - 39873 614 ## COG0234 Co-chaperonin GroES (HSP10) 23 17 Op 2 . + CDS 39884 - 41500 1586 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 41643 - 41676 2.1 - Term 42160 - 42218 7.4 24 18 Tu 1 . - CDS 42292 - 43212 1395 ## COG0039 Malate/lactate dehydrogenases - Prom 43272 - 43331 8.6 + Prom 43281 - 43340 9.1 25 19 Op 1 4/0.000 + CDS 43364 - 43741 536 ## COG1725 Predicted transcriptional regulators 26 19 Op 2 . + CDS 43734 - 44828 1021 ## COG4194 Predicted membrane protein + Term 44834 - 44867 1.0 + Prom 44868 - 44927 11.0 27 20 Tu 1 . + CDS 44959 - 46113 1890 ## COG0281 Malic enzyme + Prom 46464 - 46523 5.6 28 21 Op 1 . + CDS 46554 - 47369 1097 ## COG0561 Predicted hydrolases of the HAD superfamily 29 21 Op 2 2/0.043 + CDS 47362 - 48153 980 ## COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I 30 21 Op 3 . + CDS 48150 - 48962 804 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 31 21 Op 4 . + CDS 48959 - 49831 1161 ## COG1968 Uncharacterized bacitracin resistance protein + Term 49956 - 50003 13.2 + Prom 50893 - 50952 7.4 32 22 Tu 1 . + CDS 51002 - 51505 416 ## Apre_1260 RNA polymerase, sigma-24 subunit, ECF subfamily + Term 51512 - 51575 3.8 + Prom 51556 - 51615 7.1 33 23 Tu 1 . + CDS 51651 - 52148 539 ## Apre_1262 hypothetical protein + Term 52331 - 52368 3.0 34 24 Op 1 . + CDS 53452 - 53628 70 ## gi|227486141|ref|ZP_03916457.1| hypothetical protein HMPREF0072_1544 35 24 Op 2 . + CDS 53681 - 54919 2077 ## gi|227486142|ref|ZP_03916458.1| possible pneumococcal surface protein A + Term 55000 - 55047 4.4 + Prom 56052 - 56111 4.7 36 25 Tu 1 . + CDS 56152 - 56946 781 ## gi|227486143|ref|ZP_03916459.1| hypothetical protein HMPREF0072_1546 + Prom 56948 - 57007 6.6 37 26 Op 1 . + CDS 57031 - 59979 2982 ## gi|227486144|ref|ZP_03916460.1| possible surface anchor protein 38 26 Op 2 . + CDS 59976 - 60437 786 ## gi|227486145|ref|ZP_03916461.1| hypothetical protein HMPREF0072_1548 + Term 60449 - 60478 2.1 + Prom 60454 - 60513 4.9 39 27 Op 1 . + CDS 60540 - 61559 1207 ## gi|227486146|ref|ZP_03916462.1| hypothetical protein HMPREF0072_1549 40 27 Op 2 . + CDS 61561 - 62094 515 ## Apre_0264 hypothetical protein + Term 62103 - 62144 4.2 41 28 Tu 1 . + CDS 62151 - 63230 1026 ## COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain + Term 63244 - 63290 1.1 + Prom 63288 - 63347 8.1 42 29 Tu 1 . + CDS 63376 - 64641 957 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 64649 - 64687 1.9 - Term 64635 - 64675 4.1 43 30 Tu 1 . - CDS 64729 - 64929 180 ## + Prom 65007 - 65066 1.6 44 31 Tu 1 . + CDS 65116 - 65496 272 ## COG3344 Retron-type reverse transcriptase + Prom 66140 - 66199 80.4 45 32 Op 1 . + CDS 66249 - 67181 625 ## COG1242 Predicted Fe-S oxidoreductase 46 32 Op 2 . + CDS 67166 - 67771 733 ## COG1335 Amidases related to nicotinamidase + Prom 68494 - 68553 7.5 47 33 Tu 1 . + CDS 68630 - 70612 2587 ## COG0021 Transketolase + Term 70622 - 70655 3.1 + Prom 70616 - 70675 5.5 48 34 Op 1 . + CDS 70701 - 71282 765 ## COG0693 Putative intracellular protease/amidase 49 34 Op 2 . + CDS 71290 - 72285 1171 ## CAR_c22350 hypothetical protein 50 35 Tu 1 . - CDS 72317 - 73495 1263 ## COG0786 Na+/glutamate symporter - Prom 73600 - 73659 9.8 + Prom 73507 - 73566 9.7 51 36 Op 1 . + CDS 73632 - 74783 1148 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 52 36 Op 2 . + CDS 74807 - 75571 665 ## Apre_0246 hypothetical protein 53 36 Op 3 . + CDS 75561 - 76511 1128 ## Apre_0247 lipopolysaccharide biosynthesis protein 54 36 Op 4 . + CDS 76504 - 77160 815 ## Apre_0248 chromosome partitioning ATPase 55 36 Op 5 . + CDS 77160 - 77564 706 ## Apre_0249 SH3 type 3 domain-containing protein + Term 77571 - 77609 5.1 + Prom 77569 - 77628 4.2 56 37 Op 1 . + CDS 77653 - 77973 187 ## gi|227486162|ref|ZP_03916478.1| hypothetical protein HMPREF0072_1565 57 37 Op 2 10/0.000 + CDS 77987 - 79057 1216 ## COG3839 ABC-type sugar transport systems, ATPase components 58 37 Op 3 38/0.000 + CDS 79057 - 79941 758 ## COG1175 ABC-type sugar transport systems, permease components 59 37 Op 4 14/0.000 + CDS 79945 - 80763 714 ## COG0395 ABC-type sugar transport system, permease component + Prom 80777 - 80836 5.9 60 37 Op 5 . + CDS 80862 - 82157 1951 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 82165 - 82206 3.1 61 38 Tu 1 . - CDS 82577 - 83326 863 ## COG1414 Transcriptional regulator - Prom 83374 - 83433 14.8 + Prom 83220 - 83279 6.4 62 39 Op 1 . + CDS 83429 - 84814 1239 ## COG3314 Uncharacterized protein conserved in bacteria 63 39 Op 2 . + CDS 84825 - 85802 939 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 64 39 Op 3 . + CDS 85893 - 86075 171 ## MGAS10750_Spy1694 putative surface protein + Term 86319 - 86365 11.4 - Term 86547 - 86583 4.0 65 40 Op 1 35/0.000 - CDS 86727 - 88493 177 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 66 40 Op 2 . - CDS 88483 - 90351 173 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 67 40 Op 3 . - CDS 90335 - 91534 1111 ## Apre_1516 transcriptional regulator, ArsR family - Prom 91591 - 91650 10.3 + Prom 91650 - 91709 8.2 68 41 Tu 1 . + CDS 91934 - 93094 1618 ## COG1457 Purine-cytosine permease and related proteins + Term 93102 - 93145 7.2 69 42 Op 1 . - CDS 93136 - 93702 561 ## COG2184 Protein involved in cell division - Term 93729 - 93770 8.1 70 42 Op 2 . - CDS 93776 - 95029 837 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 + Prom 95324 - 95383 8.1 71 43 Tu 1 . + CDS 95412 - 96455 1105 ## gi|227486178|ref|ZP_03916494.1| hypothetical protein HMPREF0072_1581 72 44 Op 1 16/0.000 + CDS 96944 - 98185 1761 ## COG0137 Argininosuccinate synthase 73 44 Op 2 . + CDS 98186 - 99556 1348 ## COG0165 Argininosuccinate lyase + Term 99679 - 99721 11.3 - Term 99665 - 99709 10.1 74 45 Tu 1 . - CDS 99740 - 100129 493 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - Prom 100157 - 100216 9.9 + Prom 100098 - 100157 10.6 75 46 Op 1 8/0.000 + CDS 100375 - 102327 2445 ## COG0143 Methionyl-tRNA synthetase 76 46 Op 2 3/0.021 + CDS 102327 - 103082 804 ## COG0084 Mg-dependent DNase 77 46 Op 3 7/0.000 + CDS 103079 - 103609 654 ## COG1658 Small primase-like proteins (Toprim domain) 78 46 Op 4 . + CDS 103606 - 104448 940 ## COG0030 Dimethyladenosine transferase (rRNA methylation) + Term 104449 - 104503 11.1 79 47 Tu 1 . - CDS 104434 - 104733 267 ## gi|227486186|ref|ZP_03916502.1| hypothetical protein HMPREF0072_1589 - Prom 104826 - 104885 9.6 + Prom 104759 - 104818 11.8 80 48 Tu 1 . + CDS 104861 - 105088 403 ## COG0695 Glutaredoxin and related proteins + Term 105093 - 105126 5.1 - Term 105080 - 105113 5.1 81 49 Op 1 . - CDS 105134 - 107140 1955 ## LAR_1001 hypothetical protein 82 49 Op 2 . - CDS 107206 - 108048 948 ## Apre_1507 hypothetical protein - Prom 108077 - 108136 15.2 + Prom 108074 - 108133 8.2 83 50 Op 1 . + CDS 108195 - 109379 1338 ## COG1171 Threonine dehydratase 84 50 Op 2 . + CDS 109376 - 110806 1557 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 85 50 Op 3 . + CDS 110803 - 112026 1096 ## COG2081 Predicted flavoproteins 86 50 Op 4 . + CDS 112010 - 113302 1623 ## COG4091 Predicted homoserine dehydrogenase + Term 113322 - 113355 5.1 + Prom 113333 - 113392 8.7 87 51 Op 1 . + CDS 113430 - 114380 385 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein 88 51 Op 2 . + CDS 114436 - 115479 852 ## FMG_0240 antibiotic ABC transporter permease 89 51 Op 3 . + CDS 115466 - 116575 1077 ## COG0842 ABC-type multidrug transport system, permease component + Term 116580 - 116613 1.2 90 52 Tu 1 . + CDS 116645 - 117382 578 ## COG2819 Predicted hydrolase of the alpha/beta superfamily - Term 117407 - 117437 4.3 91 53 Tu 1 . - CDS 117687 - 118394 466 ## COG2188 Transcriptional regulators - Prom 118597 - 118656 8.9 + Prom 118706 - 118765 10.8 92 54 Op 1 13/0.000 + CDS 118796 - 119278 523 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 93 54 Op 2 13/0.000 + CDS 119287 - 120069 872 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 94 54 Op 3 3/0.021 + CDS 120062 - 120865 529 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 95 54 Op 4 . + CDS 120876 - 121913 832 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains + Term 121930 - 121976 4.5 - Term 121970 - 122021 5.0 96 55 Tu 1 . - CDS 122103 - 122642 658 ## COG0681 Signal peptidase I - Prom 122718 - 122777 12.9 - Term 122791 - 122838 6.4 97 56 Tu 1 . - CDS 122839 - 124020 1784 ## COG1251 NAD(P)H-nitrite reductase - Prom 124045 - 124104 9.9 + Prom 123814 - 123873 6.1 98 57 Op 1 . + CDS 124120 - 124620 428 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 99 57 Op 2 . + CDS 124617 - 127178 2059 ## COG0210 Superfamily I DNA and RNA helicases 100 57 Op 3 . + CDS 127219 - 127545 187 ## PROTEIN SUPPORTED gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related 101 57 Op 4 . + CDS 127542 - 128240 981 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases + Prom 128250 - 128309 4.8 102 58 Op 1 2/0.043 + CDS 128346 - 128936 560 ## COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding) 103 58 Op 2 3/0.021 + CDS 128946 - 130451 1722 ## COG0554 Glycerol kinase + Term 130502 - 130562 11.1 + Prom 130481 - 130540 9.3 104 59 Op 1 6/0.000 + CDS 130569 - 131990 1733 ## COG0579 Predicted dehydrogenase 105 59 Op 2 . + CDS 132000 - 133022 1397 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 106 59 Op 3 . + CDS 133058 - 133258 212 ## Apre_1489 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 107 59 Op 4 . + CDS 133255 - 133611 511 ## COG3862 Uncharacterized protein with conserved CXXC pairs + Term 133669 - 133704 5.1 - Term 133655 - 133690 5.1 108 60 Tu 1 . - CDS 133697 - 135169 1493 ## COG0579 Predicted dehydrogenase - Prom 135279 - 135338 13.3 109 61 Tu 1 . + CDS 135461 - 137746 2470 ## Cthe_2357 hypothetical protein 110 62 Tu 1 . + CDS 137853 - 139178 1554 ## COG0366 Glycosidases + Term 139309 - 139339 1.1 - TRNA 139780 - 139856 87.7 # Pro TGG 0 0 + Prom 139923 - 139982 8.0 111 63 Op 1 . + CDS 140068 - 140799 780 ## COG0846 NAD-dependent protein deacetylases, SIR2 family 112 63 Op 2 . + CDS 140800 - 141180 252 ## Apre_1477 hypothetical protein + Prom 141200 - 141259 11.9 113 64 Tu 1 . + CDS 141296 - 142471 1708 ## Apre_1476 hypothetical protein + Term 142496 - 142549 10.4 + Prom 142494 - 142553 6.6 114 65 Op 1 . + CDS 142592 - 143530 757 ## COG1284 Uncharacterized conserved protein 115 65 Op 2 . + CDS 143582 - 144460 883 ## gi|227486222|ref|ZP_03916538.1| conserved hypothetical protein + Term 144478 - 144506 1.0 - Term 144465 - 144493 1.0 116 66 Tu 1 . - CDS 144509 - 144664 212 ## COG1773 Rubredoxin - Prom 144765 - 144824 13.0 + Prom 144690 - 144749 6.5 117 67 Tu 1 . + CDS 144819 - 145196 467 ## Apre_1471 putative signal transduction histidine kinase + Term 145229 - 145284 1.1 + Prom 145208 - 145267 10.7 118 68 Op 1 . + CDS 145298 - 147115 2465 ## COG1217 Predicted membrane GTPase involved in stress response 119 68 Op 2 . + CDS 147124 - 147726 477 ## Apre_1469 hypothetical protein 120 68 Op 3 . + CDS 147730 - 148365 631 ## COG2344 AT-rich DNA-binding protein 121 68 Op 4 . + CDS 148366 - 150288 2270 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 122 68 Op 5 . + CDS 150332 - 150895 608 ## Apre_1466 hypothetical protein 123 68 Op 6 . + CDS 150882 - 151166 180 ## Apre_1465 hypothetical protein 124 68 Op 7 . + CDS 151177 - 151635 565 ## COG1302 Uncharacterized protein conserved in bacteria + Term 151642 - 151670 1.4 125 68 Op 8 . + CDS 151676 - 152902 800 ## COG0628 Predicted permease + Term 152907 - 152961 6.1 - Term 152895 - 152949 0.6 126 69 Tu 1 . - CDS 152954 - 153568 799 ## COG1564 Thiamine pyrophosphokinase + Prom 153586 - 153645 10.1 127 70 Op 1 . + CDS 153675 - 154892 1221 ## COG0628 Predicted permease 128 70 Op 2 . + CDS 154873 - 155475 195 ## Apre_0412 hypothetical protein + Term 155477 - 155511 -0.8 + Prom 155692 - 155751 8.7 129 71 Tu 1 . + CDS 155784 - 156659 1177 ## COG0058 Glucan phosphorylase + Prom 156661 - 156720 36.4 130 72 Op 1 . + CDS 156749 - 158197 1765 ## COG0058 Glucan phosphorylase 131 72 Op 2 . + CDS 158205 - 158999 1057 ## COG0428 Predicted divalent heavy-metal cations transporter + Term 159030 - 159081 7.6 + Prom 159078 - 159137 11.2 132 73 Op 1 . + CDS 159300 - 160487 733 ## COG2814 Arabinose efflux permease 133 73 Op 2 . + CDS 160517 - 161776 1487 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases + Prom 161889 - 161948 8.8 134 74 Op 1 7/0.000 + CDS 162185 - 162976 726 ## COG1624 Uncharacterized conserved protein 135 74 Op 2 . + CDS 162969 - 163964 1119 ## COG4856 Uncharacterized protein conserved in bacteria 136 74 Op 3 . + CDS 163957 - 165291 1078 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase 137 74 Op 4 . + CDS 165332 - 166096 1224 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) + Term 166097 - 166147 18.6 + Prom 166098 - 166157 35.3 138 75 Op 1 29/0.000 + CDS 166285 - 166740 637 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 139 75 Op 2 24/0.000 + CDS 166768 - 167385 650 ## COG0740 Protease subunit of ATP-dependent Clp proteases 140 75 Op 3 18/0.000 + CDS 167387 - 168601 301 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + Term 168611 - 168645 2.0 141 75 Op 4 4/0.000 + CDS 168657 - 170987 2831 ## COG0466 ATP-dependent Lon protease, bacterial type 142 75 Op 5 . + CDS 170984 - 171571 633 ## COG0218 Predicted GTPase + Term 171582 - 171625 7.2 - Term 171564 - 171612 3.1 143 76 Op 1 . - CDS 171617 - 172606 1294 ## gi|227486251|ref|ZP_03916567.1| conserved hypothetical protein 144 76 Op 2 . - CDS 172590 - 173114 568 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 173169 - 173228 14.4 + Prom 173161 - 173220 10.3 145 77 Op 1 1/0.043 + CDS 173381 - 174118 1284 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 146 77 Op 2 . + CDS 174067 - 175113 1360 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit + Term 175125 - 175165 1.1 + Prom 175135 - 175194 10.7 147 78 Op 1 . + CDS 175257 - 176288 1215 ## COG1024 Enoyl-CoA hydratase/carnithine racemase + Prom 176293 - 176352 3.1 148 78 Op 2 . + CDS 176439 - 177110 813 ## COG0775 Nucleoside phosphorylase + Term 177238 - 177268 -0.1 - Term 177226 - 177255 0.5 149 79 Tu 1 . - CDS 177267 - 177620 534 ## COG2033 Desulfoferrodoxin - Prom 177695 - 177754 8.9 + Prom 177671 - 177730 5.2 150 80 Op 1 . + CDS 177767 - 178201 492 ## HMPREF9243_1907 hypothetical protein 151 80 Op 2 . + CDS 178215 - 178748 670 ## COG1335 Amidases related to nicotinamidase + Term 178749 - 178786 4.0 + Prom 178765 - 178824 10.9 152 81 Op 1 . + CDS 178845 - 179567 812 ## COG3142 Uncharacterized protein involved in copper resistance + Prom 179572 - 179631 6.2 153 81 Op 2 . + CDS 179660 - 180616 1342 ## COG0039 Malate/lactate dehydrogenases + Term 180625 - 180664 6.1 - Term 180612 - 180650 2.1 154 82 Op 1 . - CDS 180726 - 181271 382 ## Apre_1455 hypothetical protein 155 82 Op 2 . - CDS 181273 - 181707 574 ## COG0716 Flavodoxins - Prom 181913 - 181972 10.6 + Prom 182210 - 182269 7.0 156 83 Op 1 1/0.043 + CDS 182293 - 184365 1818 ## COG1033 Predicted exporters of the RND superfamily 157 83 Op 2 . + CDS 184358 - 186655 3012 ## COG1511 Predicted membrane protein - Term 187003 - 187038 3.4 158 84 Tu 1 . - CDS 187048 - 187623 785 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 187663 - 187722 7.3 + Prom 187640 - 187699 7.5 159 85 Op 1 10/0.000 + CDS 187777 - 188472 507 ## COG1349 Transcriptional regulators of sugar metabolism 160 85 Op 2 19/0.000 + CDS 188469 - 189374 1055 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 161 85 Op 3 . + CDS 189364 - 191244 2396 ## COG1299 Phosphotransferase system, fructose-specific IIC component + Term 191272 - 191306 2.2 + Prom 191286 - 191345 8.2 162 86 Tu 1 . + CDS 191365 - 193056 1744 ## COG0366 Glycosidases + Prom 193100 - 193159 4.9 163 87 Op 1 . + CDS 193179 - 194018 822 ## COG2116 Formate/nitrite family of transporters 164 87 Op 2 . + CDS 194020 - 195291 1190 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase - Term 195262 - 195307 7.5 165 88 Tu 1 . - CDS 195310 - 196494 1219 ## COG0477 Permeases of the major facilitator superfamily - Prom 196624 - 196683 9.6 + Prom 196469 - 196528 8.5 166 89 Op 1 . + CDS 196653 - 197588 1085 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 197602 - 197658 2.5 + Prom 197593 - 197652 3.7 167 89 Op 2 . + CDS 197685 - 198956 1762 ## COG1362 Aspartyl aminopeptidase 168 89 Op 3 . + CDS 198957 - 199253 546 ## COG0011 Uncharacterized conserved protein + Prom 199297 - 199356 7.0 169 90 Tu 1 . + CDS 199476 - 201536 2018 ## COG3968 Uncharacterized protein related to glutamine synthetase 170 91 Tu 1 . - CDS 201677 - 202186 746 ## Apre_0392 hypothetical protein - Prom 202383 - 202442 8.1 171 92 Tu 1 . - CDS 202515 - 203819 1677 ## COG2252 Permeases - Prom 203910 - 203969 8.9 + Prom 203863 - 203922 8.1 172 93 Op 1 . + CDS 203955 - 205202 1453 ## COG1253 Hemolysins and related proteins containing CBS domains 173 93 Op 2 . + CDS 205212 - 206858 1900 ## COG1227 Inorganic pyrophosphatase/exopolyphosphatase + Term 206864 - 206899 4.2 174 93 Op 3 . + CDS 206905 - 207420 522 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 207426 - 207466 0.4 - Term 207412 - 207452 5.0 175 94 Tu 1 . - CDS 207461 - 207676 435 ## Apre_0399 hypothetical protein + Prom 207627 - 207686 4.1 176 95 Op 1 . + CDS 207759 - 208091 349 ## gi|227486284|ref|ZP_03916600.1| hypothetical protein HMPREF0072_1687 177 95 Op 2 . + CDS 208078 - 208728 673 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 208753 - 208800 5.4 + Prom 208735 - 208794 3.1 178 96 Tu 1 . + CDS 208820 - 210667 2513 ## COG0326 Molecular chaperone, HSP90 family + Term 210677 - 210715 7.0 + Prom 210688 - 210747 9.6 179 97 Tu 1 . + CDS 210907 - 211323 506 ## Sgly_0826 hypothetical protein + Prom 211581 - 211640 8.1 180 98 Op 1 . + CDS 211739 - 212155 486 ## gi|227486288|ref|ZP_03916604.1| penicillin-binding protein repressor 181 98 Op 2 . + CDS 212136 - 213494 1031 ## COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component + Prom 213535 - 213594 4.9 182 99 Tu 1 . + CDS 213621 - 214721 893 ## Dtox_1762 hypothetical protein + Prom 214834 - 214893 8.5 183 100 Tu 1 . + CDS 214929 - 215096 58 ## gi|227486291|ref|ZP_03916607.1| hypothetical protein HMPREF0072_1694 + Prom 215186 - 215245 3.2 184 101 Op 1 . + CDS 215315 - 216874 486 ## Sgly_1037 hypothetical protein 185 101 Op 2 . + CDS 216871 - 217494 277 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 186 101 Op 3 . + CDS 217484 - 217960 285 ## gi|227486294|ref|ZP_03916610.1| hypothetical protein HMPREF0072_1697 + Term 218079 - 218133 1.9 + Prom 218052 - 218111 6.7 187 102 Tu 1 . + CDS 218141 - 218473 217 ## + Term 218505 - 218566 3.8 + Prom 218654 - 218713 12.3 188 103 Tu 1 . + CDS 218924 - 219397 490 ## gi|227486296|ref|ZP_03916612.1| hypothetical protein HMPREF0072_1699 + Prom 219508 - 219567 6.8 189 104 Op 1 . + CDS 219590 - 220165 591 ## gi|227486297|ref|ZP_03916613.1| hypothetical protein HMPREF0072_1700 190 104 Op 2 . + CDS 220152 - 220586 413 ## gi|227486298|ref|ZP_03916614.1| conserved hypothetical protein + Prom 220593 - 220652 4.1 191 105 Op 1 . + CDS 220800 - 221795 929 ## BLD_1821 hypothetical protein 192 105 Op 2 . + CDS 221828 - 222367 479 ## gi|227486300|ref|ZP_03916616.1| hypothetical protein HMPREF0072_1703 193 105 Op 3 . + CDS 222423 - 222620 232 ## gi|227486301|ref|ZP_03916617.1| hypothetical protein HMPREF0072_1704 + Term 222654 - 222704 7.4 + Prom 222628 - 222687 8.6 194 106 Tu 1 . + CDS 222777 - 224165 1841 ## COG1362 Aspartyl aminopeptidase + Prom 224191 - 224250 7.2 195 107 Op 1 . + CDS 224314 - 224553 318 ## COG4466 Uncharacterized protein conserved in bacteria + Term 224560 - 224597 3.1 196 107 Op 2 . + CDS 224622 - 225452 1185 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) + Term 225478 - 225534 5.2 197 108 Tu 1 . - CDS 225526 - 225909 335 ## PROTEIN SUPPORTED gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 - Prom 225942 - 226001 7.8 + Prom 225902 - 225961 5.1 198 109 Op 1 . + CDS 226037 - 226354 504 ## BBMN68_499 protein 199 109 Op 2 . + CDS 226351 - 226659 419 ## gi|227486307|ref|ZP_03916623.1| hypothetical protein HMPREF0072_1710 + Term 226665 - 226706 7.3 200 110 Tu 1 . - CDS 226677 - 227201 599 ## PROTEIN SUPPORTED gi|228002873|ref|ZP_04049866.1| acetyltransferase, ribosomal protein N-acetylase - Prom 227225 - 227284 10.1 - TRNA 227288 - 227363 88.8 # Ala GGC 0 0 - Term 227388 - 227417 1.2 201 111 Op 1 . - CDS 227434 - 227715 482 ## 202 111 Op 2 . - CDS 227725 - 229071 1080 ## COG0534 Na+-driven multidrug efflux pump 203 111 Op 3 . - CDS 229074 - 229832 933 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Prom 229819 - 229878 2.9 204 112 Tu 1 . + CDS 229919 - 231517 1403 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes + Prom 231677 - 231736 11.7 205 113 Op 1 8/0.000 + CDS 231774 - 232148 481 ## COG1725 Predicted transcriptional regulators 206 113 Op 2 . + CDS 232138 - 233001 955 ## COG1131 ABC-type multidrug transport system, ATPase component 207 113 Op 3 . + CDS 232998 - 234230 1095 ## Apre_0432 hypothetical protein 208 113 Op 4 . + CDS 234241 - 234684 616 ## COG2131 Deoxycytidylate deaminase 209 113 Op 5 . + CDS 234681 - 235367 753 ## Apre_0434 HAD-superfamily hydrolase, subfamily IIB 210 113 Op 6 . + CDS 235364 - 236131 1036 ## COG2820 Uridine phosphorylase 211 113 Op 7 . + CDS 236148 - 236642 231 ## gi|227486319|ref|ZP_03916635.1| hypothetical protein HMPREF0072_1722 212 113 Op 8 . + CDS 236620 - 237336 480 ## COG2188 Transcriptional regulators + Term 237398 - 237438 0.2 + Prom 237339 - 237398 7.7 213 114 Op 1 3/0.021 + CDS 237488 - 238543 813 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 214 114 Op 2 2/0.043 + CDS 238564 - 239583 1138 ## COG2222 Predicted phosphosugar isomerases 215 114 Op 3 9/0.000 + CDS 239595 - 240008 611 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 216 114 Op 4 13/0.000 + CDS 240018 - 240485 519 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 217 114 Op 5 13/0.000 + CDS 240496 - 241287 986 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 218 114 Op 6 . + CDS 241277 - 242113 632 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID + Term 242115 - 242177 12.4 219 115 Tu 1 . + CDS 242190 - 242852 786 ## COG0637 Predicted phosphatase/phosphohexomutase + Prom 242997 - 243056 8.0 220 116 Tu 1 . + CDS 243091 - 245004 1812 ## Apre_0739 YSIRK gram-positive signal peptide + Term 245014 - 245065 5.1 + Prom 245092 - 245151 9.0 221 117 Op 1 8/0.000 + CDS 245171 - 245554 387 ## COG1725 Predicted transcriptional regulators 222 117 Op 2 . + CDS 245547 - 246383 937 ## COG1131 ABC-type multidrug transport system, ATPase component 223 117 Op 3 . + CDS 246383 - 247033 336 ## Celf_0281 hypothetical protein + Term 247101 - 247129 -0.0 - Term 247215 - 247256 3.6 224 118 Op 1 . - CDS 247263 - 248195 1333 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 225 118 Op 2 6/0.000 - CDS 248207 - 249607 1624 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 226 118 Op 3 . - CDS 249579 - 250622 1190 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes - Prom 250647 - 250706 13.4 + Prom 250931 - 250990 9.1 227 119 Op 1 . + CDS 251083 - 251892 1184 ## Apre_0438 SH3 type 3 domain-containing protein 228 119 Op 2 . + CDS 251840 - 252010 94 ## gi|227486336|ref|ZP_03916652.1| hypothetical protein HMPREF0072_1739 229 119 Op 3 9/0.000 + CDS 252044 - 252313 341 ## COG3830 ACT domain-containing protein 230 119 Op 4 . + CDS 252315 - 253664 1530 ## COG2848 Uncharacterized conserved protein 231 119 Op 5 . + CDS 253674 - 254198 819 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 254212 - 254249 8.7 - Term 254205 - 254232 1.5 232 120 Op 1 4/0.000 - CDS 254238 - 254669 675 ## COG2893 Phosphotransferase system, mannose/fructose-specific component IIA 233 120 Op 2 13/0.000 - CDS 254669 - 255661 1075 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 234 120 Op 3 13/0.000 - CDS 255651 - 256448 1165 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 235 120 Op 4 . - CDS 256465 - 256941 644 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 236 120 Op 5 . - CDS 256951 - 257226 441 ## Corgl_0404 YajC family protein - Prom 257380 - 257439 10.4 + Prom 257458 - 257517 8.2 237 121 Op 1 7/0.000 + CDS 257700 - 258830 1359 ## COG2222 Predicted phosphosugar isomerases 238 121 Op 2 . + CDS 258830 - 259531 742 ## COG2188 Transcriptional regulators + Term 259550 - 259591 2.7 239 122 Op 1 . - CDS 259698 - 261605 1877 ## COG3855 Uncharacterized protein conserved in bacteria - Term 261623 - 261676 7.4 240 122 Op 2 . - CDS 261679 - 262545 958 ## Apre_0444 hypothetical protein - Prom 262595 - 262654 11.2 + Prom 262923 - 262982 6.3 241 123 Op 1 58/0.000 + CDS 263009 - 266689 4603 ## COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit 242 123 Op 2 . + CDS 266704 - 270261 4306 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Prom 270263 - 270322 3.4 243 124 Op 1 8/0.000 + CDS 270404 - 271195 646 ## COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific 244 124 Op 2 . + CDS 271195 - 271785 584 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 271829 - 271855 -1.0 - Term 271811 - 271848 1.0 245 125 Tu 1 . - CDS 271856 - 272977 1141 ## COG1453 Predicted oxidoreductases of the aldo/keto reductase family - Prom 272999 - 273058 6.2 + Prom 272963 - 273022 4.5 246 126 Op 1 . + CDS 273078 - 274346 1575 ## COG0038 Chloride channel protein EriC + Prom 274358 - 274417 5.5 247 126 Op 2 . + CDS 274445 - 275338 853 ## COG4509 Uncharacterized protein conserved in bacteria + Term 275385 - 275421 3.1 - Term 275115 - 275154 -0.0 248 127 Tu 1 . - CDS 275396 - 276370 772 ## COG1073 Hydrolases of the alpha/beta superfamily - Prom 276418 - 276477 9.5 249 128 Tu 1 . - CDS 276732 - 277232 867 ## COG2077 Peroxiredoxin - Prom 277377 - 277436 8.3 + Prom 277408 - 277467 11.4 250 129 Op 1 56/0.000 + CDS 277628 - 278035 695 ## PROTEIN SUPPORTED gi|227486359|ref|ZP_03916675.1| ribosomal protein S12 + Prom 278043 - 278102 5.2 251 129 Op 2 51/0.000 + CDS 278134 - 278625 823 ## PROTEIN SUPPORTED gi|227486360|ref|ZP_03916676.1| ribosomal protein S7 252 129 Op 3 . + CDS 278638 - 280710 2843 ## COG0480 Translation elongation factors (GTPases) 253 130 Tu 1 . - CDS 282274 - 282915 674 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - Prom 283132 - 283191 5.6 - Term 282952 - 282983 4.1 254 131 Tu 1 . - CDS 283193 - 284809 2159 ## COG1151 6Fe-6S prismane cluster-containing protein - Prom 284851 - 284910 10.6 + Prom 284895 - 284954 7.8 255 132 Tu 1 . + CDS 285059 - 285256 210 ## gi|227486364|ref|ZP_03916680.1| hypothetical protein HMPREF0072_1767 + Term 285359 - 285391 1.1 + Prom 285380 - 285439 5.8 256 133 Op 1 11/0.000 + CDS 285491 - 287746 3294 ## COG1882 Pyruvate-formate lyase 257 133 Op 2 1/0.043 + CDS 287761 - 288480 718 ## COG1180 Pyruvate-formate lyase-activating enzyme 258 133 Op 3 . + CDS 288490 - 289170 648 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 289208 - 289244 2.2 + Prom 289205 - 289264 5.0 259 134 Tu 1 . + CDS 289348 - 290613 1686 ## COG3949 Uncharacterized membrane protein + Term 290614 - 290651 4.8 + Prom 290616 - 290675 8.2 260 135 Op 1 . + CDS 290750 - 291481 540 ## COG4905 Predicted membrane protein + Prom 291487 - 291546 4.4 261 135 Op 2 . + CDS 291571 - 292188 647 ## COG0500 SAM-dependent methyltransferases + Prom 292248 - 292307 10.2 262 136 Op 1 . + CDS 292331 - 293491 1289 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 263 136 Op 2 . + CDS 293492 - 294169 732 ## Apre_0481 hypothetical protein 264 136 Op 3 . + CDS 294169 - 295101 1153 ## COG3191 L-aminopeptidase/D-esterase + Prom 295450 - 295509 9.8 265 137 Op 1 23/0.000 + CDS 295757 - 296104 410 ## COG1380 Putative effector of murein hydrolase LrgA 266 137 Op 2 . + CDS 296106 - 296846 876 ## COG1346 Putative effector of murein hydrolase 267 137 Op 3 4/0.000 + CDS 296870 - 298054 856 ## COG0003 Oxyanion-translocating ATPase 268 137 Op 4 . + CDS 298051 - 299214 927 ## COG0003 Oxyanion-translocating ATPase 269 137 Op 5 13/0.000 + CDS 299242 - 299790 613 ## COG1556 Uncharacterized conserved protein 270 137 Op 6 1/0.043 + CDS 299814 - 301973 2357 ## COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain 271 137 Op 7 2/0.043 + CDS 301976 - 302968 1004 ## COG0142 Geranylgeranyl pyrophosphate synthase 272 137 Op 8 1/0.043 + CDS 302968 - 303888 584 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 273 137 Op 9 1/0.043 + CDS 303890 - 304579 288 ## PROTEIN SUPPORTED gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 274 137 Op 10 12/0.000 + CDS 304607 - 305902 1700 ## COG0644 Dehydrogenases (flavoproteins) 275 137 Op 11 . + CDS 305902 - 306186 197 ## COG2440 Ferredoxin-like protein + Term 306425 - 306463 -0.5 276 138 Tu 1 . - CDS 306343 - 307092 278 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 307139 - 307198 7.1 + Prom 307142 - 307201 5.7 277 139 Op 1 24/0.000 + CDS 307257 - 307541 489 ## PROTEIN SUPPORTED gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 278 139 Op 2 21/0.000 + CDS 307543 - 308055 511 ## COG0629 Single-stranded DNA-binding protein 279 139 Op 3 . + CDS 308081 - 308305 377 ## PROTEIN SUPPORTED gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 + Term 308342 - 308368 1.0 + Prom 308351 - 308410 11.0 280 140 Tu 1 . + CDS 308436 - 310400 3292 ## COG3808 Inorganic pyrophosphatase + Term 310408 - 310440 4.0 + Prom 310404 - 310463 5.4 281 141 Op 1 . + CDS 310628 - 311110 557 ## BP951000_0625 phage protein 282 141 Op 2 . + CDS 311122 - 311346 258 ## gi|227486391|ref|ZP_03916707.1| hypothetical protein HMPREF0072_1794 + Term 311347 - 311400 -0.9 - TRNA 311756 - 311845 67.4 # Leu AAG 0 0 283 142 Op 1 . + CDS 311983 - 312822 942 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 284 142 Op 2 . + CDS 312815 - 313564 627 ## COG0796 Glutamate racemase 285 142 Op 3 11/0.000 + CDS 313566 - 314471 1050 ## COG0248 Exopolyphosphatase 286 142 Op 4 . + CDS 314474 - 316651 2029 ## COG0855 Polyphosphate kinase + Term 316670 - 316716 7.1 + Prom 316711 - 316770 8.8 287 143 Op 1 . + CDS 316883 - 317881 1203 ## COG1876 D-alanyl-D-alanine carboxypeptidase 288 143 Op 2 . + CDS 317890 - 318261 544 ## COG0251 Putative translation initiation inhibitor, yjgF family + Prom 318556 - 318615 13.3 289 144 Tu 1 . + CDS 318712 - 319197 523 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 319319 - 319362 3.1 + Prom 319326 - 319385 9.0 290 145 Op 1 . + CDS 319433 - 319840 275 ## gi|227486400|ref|ZP_03916716.1| hypothetical protein HMPREF0072_1803 291 145 Op 2 . + CDS 319894 - 321261 1056 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 321493 - 321528 4.2 - Term 321480 - 321514 3.2 292 146 Tu 1 . - CDS 321526 - 322743 1662 ## COG0426 Uncharacterized flavoproteins - Prom 322770 - 322829 7.9 + Prom 322751 - 322810 5.3 293 147 Tu 1 . + CDS 322901 - 324571 2093 ## COG1960 Acyl-CoA dehydrogenases + Term 324591 - 324631 4.7 + Prom 324573 - 324632 4.8 294 148 Op 1 . + CDS 324658 - 326448 1937 ## COG0171 NAD synthase 295 148 Op 2 . + CDS 326438 - 327235 725 ## COG1408 Predicted phosphohydrolases + Term 327241 - 327308 30.2 + TRNA 327223 - 327296 48.3 # Arg CCG 0 0 + Prom 327237 - 327296 65.4 296 149 Op 1 . + CDS 327366 - 327593 363 ## MGAS10270_Spy1928 RelB protein 297 149 Op 2 . + CDS 327583 - 327849 344 ## COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system 298 150 Tu 1 . - CDS 328126 - 328548 647 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Prom 328595 - 328654 7.7 + Prom 328518 - 328577 6.8 299 151 Op 1 25/0.000 + CDS 328639 - 329715 1768 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 300 151 Op 2 42/0.000 + CDS 329723 - 330382 253 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 301 151 Op 3 . + CDS 330376 - 331191 930 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 331205 - 331240 -0.6 + Prom 331360 - 331419 5.6 302 152 Tu 1 . + CDS 331516 - 332373 523 ## COG1266 Predicted metal-dependent membrane protease + Term 332590 - 332627 3.3 303 153 Op 1 . + CDS 332728 - 333774 863 ## gi|227486413|ref|ZP_03916729.1| hypothetical protein HMPREF0072_1816 304 153 Op 2 . + CDS 333797 - 334762 867 ## Selsp_0969 hypothetical protein 305 153 Op 3 . + CDS 334772 - 335749 856 ## Vpar_1397 hypothetical protein 306 153 Op 4 . + CDS 335806 - 336534 845 ## COG3022 Uncharacterized protein conserved in bacteria 307 153 Op 5 28/0.000 + CDS 336531 - 337652 1148 ## COG0420 DNA repair exonuclease 308 153 Op 6 . + CDS 337642 - 340680 3185 ## COG0419 ATPase involved in DNA repair 309 153 Op 7 8/0.000 + CDS 340673 - 344020 3636 ## COG3857 ATP-dependent nuclease, subunit B 310 153 Op 8 . + CDS 344013 - 347378 3611 ## COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) + Term 347502 - 347534 -0.2 - Term 347398 - 347431 2.1 311 154 Tu 1 . - CDS 347557 - 348285 236 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 348506 - 348565 8.1 + Prom 348368 - 348427 5.3 312 155 Tu 1 . + CDS 348553 - 352101 4617 ## Apre_0739 YSIRK gram-positive signal peptide + Term 352111 - 352149 6.3 + Prom 352405 - 352464 7.9 313 156 Tu 1 . + CDS 352494 - 352784 234 ## COG2827 Predicted endonuclease containing a URI domain + Term 352856 - 352899 4.3 314 157 Tu 1 . - CDS 353137 - 353379 64 ## - Prom 353558 - 353617 4.2 - Term 353583 - 353613 3.4 315 158 Tu 1 . - CDS 353645 - 354799 1429 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 354827 - 354886 8.8 - Term 355131 - 355159 -0.0 316 159 Op 1 . - CDS 355225 - 355758 740 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 317 159 Op 2 . - CDS 355748 - 356725 972 ## COG1295 Predicted membrane protein 318 159 Op 3 . - CDS 356706 - 358625 2375 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases + Prom 358878 - 358937 9.7 319 160 Tu 1 . + CDS 359103 - 359642 585 ## PROTEIN SUPPORTED gi|228003432|ref|ZP_04050421.1| SSU ribosomal protein S30P + Term 359691 - 359722 4.1 + Prom 359686 - 359745 7.5 320 161 Op 1 . + CDS 359773 - 361302 1500 ## COG0606 Predicted ATPase with chaperone activity 321 161 Op 2 . + CDS 361302 - 362486 1145 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB + Prom 362516 - 362575 6.0 322 162 Op 1 . + CDS 362600 - 362854 445 ## Lebu_1178 prevent-host-death family protein 323 162 Op 2 . + CDS 362851 - 363108 152 ## COG4115 Uncharacterized protein conserved in bacteria 324 162 Op 3 . + CDS 363126 - 364424 1314 ## Apre_0745 peptidase S41 + Prom 364445 - 364504 5.8 325 163 Tu 1 . + CDS 364568 - 364993 614 ## COG0071 Molecular chaperone (small heat shock protein) + Term 365002 - 365035 4.5 + Prom 365020 - 365079 7.9 326 164 Op 1 32/0.000 + CDS 365099 - 365794 565 ## COG0020 Undecaprenyl pyrophosphate synthase 327 164 Op 2 12/0.000 + CDS 365791 - 366570 783 ## COG0575 CDP-diglyceride synthetase 328 164 Op 3 6/0.000 + CDS 366580 - 367599 973 ## COG0750 Predicted membrane-associated Zn-dependent proteases 1 329 164 Op 4 . + CDS 367610 - 368668 1142 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 330 164 Op 5 . + CDS 368658 - 373049 5290 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Term 373058 - 373101 7.5 - Term 373046 - 373089 7.6 331 165 Op 1 36/0.000 - CDS 373097 - 375334 1963 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 332 165 Op 2 . - CDS 375334 - 376029 325 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 376057 - 376116 9.8 333 166 Op 1 . - CDS 376191 - 377882 1487 ## Apre_0602 hypothetical protein 334 166 Op 2 . - CDS 377875 - 378759 922 ## COG0714 MoxR-like ATPases 335 166 Op 3 . - CDS 378761 - 379075 416 ## Apre_0601 hypothetical protein - Term 379094 - 379123 1.2 336 166 Op 4 . - CDS 379136 - 380590 1889 ## COG1966 Carbon starvation protein, predicted membrane protein - Prom 380615 - 380674 15.6 + Prom 380622 - 380681 9.2 337 167 Op 1 32/0.000 + CDS 380846 - 381289 544 ## COG0779 Uncharacterized protein conserved in bacteria 338 167 Op 2 22/0.000 + CDS 381301 - 382524 776 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 339 167 Op 3 15/0.000 + CDS 382553 - 382819 302 ## COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination 340 167 Op 4 32/0.000 + CDS 382829 - 384979 2703 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 341 167 Op 5 4/0.000 + CDS 384980 - 385363 640 ## COG0858 Ribosome-binding factor A 342 167 Op 6 1/0.043 + CDS 385344 - 386315 272 ## PROTEIN SUPPORTED gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B 343 167 Op 7 12/0.000 + CDS 386308 - 387204 1031 ## COG0130 Pseudouridine synthase 344 167 Op 8 9/0.000 + CDS 387179 - 388123 479 ## PROTEIN SUPPORTED gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 345 167 Op 9 26/0.000 + CDS 388196 - 388495 494 ## PROTEIN SUPPORTED gi|227486454|ref|ZP_03916770.1| ribosomal protein S15 + Term 388503 - 388532 1.1 346 167 Op 10 . + CDS 388544 - 390700 1555 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 390708 - 390744 5.0 + Prom 391033 - 391092 6.0 347 168 Tu 1 . + CDS 391143 - 392510 1396 ## COG3314 Uncharacterized protein conserved in bacteria + Term 392533 - 392579 8.2 + Prom 392559 - 392618 13.1 348 169 Op 1 . + CDS 392676 - 393122 500 ## Apre_1828 hypothetical protein + Prom 393159 - 393218 3.4 349 169 Op 2 9/0.000 + CDS 393329 - 393601 308 ## COG3077 DNA-damage-inducible protein J 350 169 Op 3 . + CDS 393591 - 393869 93 ## COG3041 Uncharacterized protein conserved in bacteria + Term 393876 - 393906 -0.5 + Prom 393890 - 393949 10.3 351 170 Op 1 . + CDS 393992 - 396277 2009 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 352 170 Op 2 . + CDS 396287 - 396817 667 ## COG0558 Phosphatidylglycerophosphate synthase 353 170 Op 3 . + CDS 396839 - 397252 241 ## gi|227486462|ref|ZP_03916778.1| hypothetical protein HMPREF0072_1865 354 170 Op 4 . + CDS 397311 - 398360 1483 ## COG0468 RecA/RadA recombinase + Term 398369 - 398406 6.4 - Term 398355 - 398394 3.0 355 171 Tu 1 . - CDS 398402 - 399436 935 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 399533 - 399592 7.8 356 172 Op 1 . + CDS 399507 - 399752 331 ## COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 357 172 Op 2 . + CDS 399745 - 400278 513 ## Apre_0621 septum formation initiator 358 172 Op 3 10/0.000 + CDS 400262 - 401626 1150 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 359 172 Op 4 . + CDS 401616 - 402185 716 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 360 172 Op 5 . + CDS 402229 - 402720 434 ## Apre_0624 hypothetical protein 361 172 Op 6 1/0.043 + CDS 402783 - 403574 938 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 362 172 Op 7 1/0.043 + CDS 403552 - 404550 462 ## PROTEIN SUPPORTED gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase 363 172 Op 8 2/0.043 + CDS 404519 - 404992 708 ## COG0782 Transcription elongation factor 364 172 Op 9 . + CDS 405002 - 406915 2459 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 406931 - 406974 5.6 365 173 Op 1 . + CDS 406979 - 407260 138 ## FMG_0930 putative lipoprotein + Term 407287 - 407328 4.0 + Prom 407263 - 407322 4.6 366 173 Op 2 . + CDS 407344 - 407589 296 ## SPAP_0865 hypothetical protein + Prom 409451 - 409510 80.4 367 174 Op 1 . + CDS 409641 - 410150 377 ## COG3645 Uncharacterized phage-encoded protein 368 174 Op 2 . + CDS 410143 - 411195 965 ## COG3505 Type IV secretory pathway, VirD4 components 369 174 Op 3 . + CDS 411235 - 413049 1478 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Prom 413195 - 413254 6.1 370 175 Op 1 . + CDS 413296 - 413823 259 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 371 175 Op 2 . + CDS 413820 - 414608 498 ## EUBREC_3106 hypothetical protein 372 175 Op 3 . + CDS 414589 - 415476 671 ## COG1131 ABC-type multidrug transport system, ATPase component 373 175 Op 4 . + CDS 415469 - 416662 606 ## EUBREC_3104 hypothetical protein + Prom 416734 - 416793 3.8 374 176 Op 1 . + CDS 416816 - 416995 104 ## gi|212695592|ref|ZP_03303720.1| hypothetical protein ANHYDRO_00109 + Prom 416997 - 417056 2.5 375 176 Op 2 . + CDS 417086 - 417523 400 ## gi|212695585|ref|ZP_03303713.1| hypothetical protein ANHYDRO_00102 + Term 417545 - 417588 1.4 + Prom 417558 - 417617 5.5 376 177 Tu 1 . + CDS 417703 - 418008 340 ## Apre_1787 hypothetical protein + Prom 418036 - 418095 6.5 377 178 Tu 1 . + CDS 418115 - 418348 141 ## Vpar_0168 transcriptional regulator, XRE family 378 179 Tu 1 . + CDS 418513 - 418761 222 ## gi|227486487|ref|ZP_03916803.1| hypothetical protein HMPREF0072_1890 + Prom 418785 - 418844 6.5 379 180 Tu 1 . + CDS 418933 - 419421 530 ## gi|227486488|ref|ZP_03916804.1| hypothetical protein HMPREF0072_1891 + Prom 420012 - 420071 9.1 380 181 Op 1 . + CDS 420312 - 421421 701 ## LLKF_0684 ChW repeat-/cell adhesion domain-containing transglutaminase-like protease 381 181 Op 2 . + CDS 421378 - 421773 275 ## gi|227486492|ref|ZP_03916808.1| hypothetical protein HMPREF0072_1895 + Prom 422602 - 422661 6.8 382 182 Op 1 . + CDS 422722 - 422916 144 ## gi|227486493|ref|ZP_03916809.1| conserved hypothetical protein + Prom 422933 - 422992 5.7 383 182 Op 2 . + CDS 423012 - 423242 94 ## Vpar_0168 transcriptional regulator, XRE family + Term 423452 - 423514 28.5 + Prom 423454 - 423513 54.1 384 183 Tu 1 . + CDS 423589 - 424134 51 ## gi|227486495|ref|ZP_03916811.1| hypothetical protein HMPREF0072_1898 + Term 424344 - 424381 1.1 - Term 424028 - 424073 1.4 385 184 Tu 1 . - CDS 424311 - 424499 144 ## gi|227486497|ref|ZP_03916813.1| hypothetical protein HMPREF0072_1900 - Prom 424528 - 424587 3.7 + Prom 424865 - 424924 4.5 386 185 Tu 1 . + CDS 425028 - 425342 338 ## HMPREF0837_11443 hypothetical protein Predicted protein(s) >gi|229269865|gb|GG666046.1| GENE 1 3171 - 3368 101 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFVSKMKRTLYASPKRGTRSQVSSPLSPTKHFPEKCLFFWEIWGRTSRLCHNRAETRLLR RLFRA >gi|229269865|gb|GG666046.1| GENE 2 3996 - 4769 970 257 aa, chain + ## HITS:1 COG:no KEGG:Apre_1461 NR:ns ## KEGG: Apre_1461 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 254 1 256 258 219 42.0 8e-56 MDFSLVPVADKTFFNYIYLGLGSNGRGLIALFNTRGNTMVKESVASELDINLLDEDYIDD KKTYKRAILGDLLIGGLRLSKVPVLVAKDSAFDLGTDSLGNTNDCDMVLGWNVISQFAWR ANPREGRFEVQTSDFKSSKEKNNRPIINIGFNDKIIKAAIDTSRPFTIISPSLAKEALEN DPNAKDTLAMMGESTDAITSINRFVFTNDNKEVSLGSTQIEPDLEGKDIQVVFGADLLRS TKWAIYGPSGYIRLENF >gi|229269865|gb|GG666046.1| GENE 3 4772 - 5449 341 225 aa, chain + ## HITS:1 COG:Cgl0917 KEGG:ns NR:ns ## COG: Cgl0917 COG4912 # Protein_GI_number: 19552167 # Func_class: L Replication, recombination and repair # Function: Predicted DNA alkylation repair enzyme # Organism: Corynebacterium glutamicum # 15 223 18 206 208 130 38.0 1e-30 MFEIEEIENIFKNNANPPRAEKMAAYMRNKFDFYGIPAGKRSELTKPFLKEAKKEGAINW QLLTDLFSHNYREINYLGLDLLKTQSKLLSLSDFERLVGLASLRPWWDTIDNIDTIIGSL GLTNKDFEKKITTLARSENFWLRRIAIGHQRKYKEKTNTDLLAKIIKINLSVTCKDKDEK FFIAKAIGWALREYSKRNPDWVRNFLTVENNRLPRLSTREASKYL >gi|229269865|gb|GG666046.1| GENE 4 5554 - 7524 2258 656 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486108|ref|ZP_03916424.1| ## NR: gi|227486108|ref|ZP_03916424.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 656 1 656 656 1034 100.0 0 MKMRKNNLGFGILSLALALALPLNANADEGQTLTSPETLDQGPKTQVEANTKPIEDNEII QTNPENTVNPANVNPVTPATPTRPQPTPRLTNYRTNSFLNLLVNTNYRSLKDEANKKEEE KIKVNPYSVELKEGDKDSRNYTYLAYSFAIKGDDEPRDYTISVFALKDGKVKNVELDNFN TEGKVTSAGKKMAEAAEQIESEDVLGFRIKTKITSDGYVKAVVKIDRDAEPGDYTLYYVV SRGGKPTIGRMDVTLGKNGDFSYYITSDKDKKDYDNLGEDKVNPFENLPFTKYLLNDTDE EKNLTDFIHPGLKVGDKYKIVVNYINPNTLEEKRDDITDLESYKIPANSLVRLDVREKSD KDNPIKDAEIFTYGFELPKDSSEPISLMSFVVKKDANKGKEAKFDSEKALRDAMDEVEGL LAEKKKSLIELYPDEEEREYRALSVILKEQTKKIEELIQQALLDNELDKLNKLEKDNPQE AKAEYKRIADLVKEAKDLNKKANKKLIELDEINLIDNNTDPLASKAKGTKLVLNLGKLTP LSTISDLTKDSPRQSERNFSKDLKKKLEEAIKKVDTVTIGEKDDKKAESKPTNVKESKEN KDLTKRISIFDTTNIENPKEHTFELRKATEEPKVNTPIFIKYLQSLDKRSKLIDNK >gi|229269865|gb|GG666046.1| GENE 5 8020 - 24981 17914 5653 aa, chain + ## HITS:1 COG:no KEGG:FMG_0186 NR:ns ## KEGG: FMG_0186 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 561 3297 466 3159 4919 1793 43.0 0 MKGKISLLTRKIFATVIAVAMSIPPTAFANANEPVVYTENSSIMGIRENKEELPRIENTD KTKLSKDLGSYNLEIKANLDPSLTKINYTIKAKRKEKLAEDKQGKLSLSLTKTPSSNLND LQLISANTENQTNEPDFKAEGLPSLVITSKAKDEIIYELSADVNKAKDQRSYKLILSLAE EAKSEVLAYNLKVEKGLSLKDGQEVETVELVNEDDESPLIKGEYKKEGILGGLFASQDSI TWEAFILNEEENQEITYDFNLDKNQDPTNSKIAIDYYEPTDKGFEIKREFSQTIDFAKKI KFEIPKGHLAKLTLKTKVSKKNTKVKSYSLNNGVVKNPIYIEGNEEEKSNDDEEPAQKEE NKKYQKDPTDKGTVEVKPSESNVESNPGAKPEGKDSQTQIVATDSSGKEIKIEEKNQPVE ENKKPKISALILNRDSLIARLKAENKLTNQLETAIADLADILNSYNEERITDQDLKDFTK SLAERNQLAKADLKSYLEAILSGLNKQTNKAANINYDEIITYAYPEKKEAKPQDKKPEAK KNEGQKAEEKPAPSKESQEHTPPVKKEEPKANQEDKPLQNEKSEAVKTFDKDLASLKEEA KKEPAKKSGIFEGLKSLLGQTDLQKADRELKKALADKKNTLADIQKLLDSFKSKYNLSKA DQAKLMDDNGDAIRALIEKTGYTGGHVFAVRGANQLTDKEKENLKNKKFTVLTRFNTSNA GGAIQDYQYFDIHLDNKLTVKDPSSLEDIKYNGRVIAKPKYINDKGENKIRYNIQGQIPE NISILLKIPVDYNTDNITTLDQDGNFTVINKVSGMGVKAPKDLLPQKVDRYGNLAGTIIE PGRGDVPELIESDDKSYKVDMDAYGIPNVVDGELKGFSWKATVLSTVDLKGINLSVNFTT VKGSGLGEIQNLTLDGANVKATSNNLKDHTGIVDSINYKPNKNTRELNFTFYTPVINKQE SYMLDLNAMANGKVGAKRVVGRQGYPKEKVEVLTPSRVGMNNRTSILGEFPNQTEARWTI TDQVSTGDDGKLPLESRQLAGGQSISSGKVAVYGVDTKKGSPTYGQMIQVGSDESVSSIP DKETKPQNAQPVGSIVAYEYTTNLDGKPASSIGGVVISKNQDIHVDQYWGLEAGINMPAQ TIKAVNPNKQEGQDGYELGHINLEQGSNSDSNRQFTIQNVKVWNIDDSGNATRVQPAIKQ DLPKEVNGHQFVENYNYYRQDLGDYYIHNRGVVKTEEKFGNFTLHKVGPDKEDVPNATFR LFRGGEAITNSEGKAEFKNIKPGTYYLTEIKAPPGYKLAEDTKIVVEKNGKVRATGPDAK QTGDEGATQYFKDKDYPLFMNLMSYATKGQNGEVTTYIYLKPDEGGGTNQNTRLSITGYD NSKNLNVEVYDVGPSLRSGLRQAMELQTGVEGKIAGPVLNQPNRFPITGDPKVYDTYTQK TGYQIKIPHERFGTNWGFLVKVKGTPSTSNGEIGYDWLVDNTNPGNNSKIQKTITPADPN VVNKTTVTVKDEKFETKPIEVIKVTSKKETLGGATFVLKNPDTDEILKTVKSVSIGENKG KVDFDKMPPGDYIIEEVAGPEGYIESQLVFDVHVDEASQVTYKPRFKNGVGTPVAGVDYW IEDEVIADEKTKVDVVTVNQSMTLSENNFGETGIKEGVWEAYRYESYTYKANIKLSSSEP GKRFEIQFDPKLDFTQYVNQFPEIKNNGQVIAKPYFNYDTNLLTYVFTEASGSGEVIFDL VIDGVIPSKFYAKNNGDYEFTNVVAPGQNKVKVMGNQVDTVHVKAFYEDYDSPKDGNAPP QAYYFREVYKEGEDWYVKAIAYYNPKANAVGNRMIARTFYFNWMSTDWQSGNIANWVGRG YKTAFKLQNVKVYSVQPTVNNFNQKTSEPYMPLSMGIRPENDPSIYRLELNQDINDKYVS SRQGSIGLTYDENQLSSTGALTGPRPLQIDIPAISKNNEGYVIDQTFKVTDLNTFRSRFR AFVMQNSSDTKNSLKSAFASKVNVNEATAEQNKKEIPKFYKQKVMMANEEYVPTQFKIRK YNEADKSQNLAGAIFTLTNMDTGKSITKKTGKDGYLTFDKLQPGVYRLKETEAPKDFIKS DKRWLVNVAKDGIVTITEVGFNSDGTSIIGKDLTLEVANKPEGQDFVVYKKGDQGQALAG AKFVIKKKDGKNYTEVGKGESDSSGLVKFKNNTGADLKLIDGIYTLEETDPPTGYKKLDK KWVLVVKDNKVKVYDYIEGPDEETSSKANLSLLNEEGTHWVDMSKRSPAKFSGLNDPRWK GYINNSPYPYKLGTRIIGINKGAAQPYVIQRFVINPEAKDMGPSKVQIHRQPLNLDNSDW YQGSAAEAYKVFKLDKAVTENVEDIKLEHYVATELNLTAKKVEKQGEVPERMEFDLPETD KPIIIDVKVPYKNENGGVGLGIDYWENVGTYNEKVYWKPDFYESVTDIPEGDEVTSNTQA GNIIGAYVSEGSLDVANERKRHKFEFTKVRETSLDGLSGATFKLTGTKPVTETKWGKSDK DGKVSFKDLLPGSYKLEEHGAPQGYEGSNTDWTVTILEDGKVYIKDNNPSNTVPNKDPEA QWQKVDVTNTNKINKSDSVRDEYKQTADKKIKTHIVRINKATNRIRQVYVLNRLTENLLD PTLELHSYPEKWDITDKNTNVMSVTEVGNDASPENLGKIGANVQYSTEIINKNNHTRLVI KPKISGEKTIAVVIETDLKDATEIGGIGTGMDYDNQGNQYWGAEKYASLDDFVLAKVEHP TVDKNTKLIIDGKDKSNDAQNLLRTANEETPALLARENGIIARNYAFRSMDNDVTDLSGP LSSLEARSASLNSFRSLAPMMARSIAPRSMTYSTRAARAPRAADVWEKVDQNRSINRTTS NRATDNQTRITEINKGQGKYRQIFLVNKSGSGVDSPRYKFHSEPLGTSIIGKKYYGRPIN FKVLSIRPVLSSSTIDNIQYDGNQTLRYNSDEVIPDGQYHRFQFRLATNDKRPIAIEVEY DYPKTGGEIGLGMDYYPSYRSNGVWAAEKYGSADDINCKHSVRITQPNEATIIPSSTLAK KGTKIDLTISPKTGYEGYVLDSLTVTDANGQDVTVTGTSFEMPDTDVTVMAVMKSPGQQP KIYDVTVIGNISHGKITPNVNKAKAGDEVTVNVEPDPGYKLASLVYEAEDLLDPVPIVGN KFIMPKSNVRLNATFEKSQVVPQTYKITTIKTTGGSIIAQPNAKANETVRIQINPGVGNY SLVDGQVDVRTSDNSPVPVSYDDQGPYFTMPASDVTVSGQFQQADLNNGYVVRIQDTANG RVTASQYHSWPGKEITLTPSPEPGYKLKSWFAVSNGSRVQITDNKFKMPDGEVYIIPTFE RDFDRKYTIGTDVSEGGTATPTQSSATAGQPIGMDIRPEEGYRLESVNVIDENEIKVAEY NFLSNSFSMPAKNVIVKVTFKKIEYTITKEQTEGGTVSIDKSKATKGETVTITVTPKEGY EVGQVKGDNIPINLVDGKYPFKMPARDVTIRVTFNKKEVKPKVSYFVGVDGNNNGKKVVV YTRTEPNKSEAGKLVEFTVTPFDDYEITSVYVRLSDGSGRNVEPLKQEGNKYSFIMPNQA VTIYANVQYVQPPEGTLLVGINPNITNGSVTTNPRRPYPNDKVRITATPKQDYSLESLSV TKQWGGNVDVQYDNEGPYFIMPAENVTVYATFRQGAAPNPDIPDVKPDDNELGYLIYDPS NPNKIIKKKAMLTNRLAGLELKVYKKNINGRTLEGGEFKLIKTEADYKTEDKNFTPITAV SGLDGRILFKDKDNQPVKLQKGYYVLEEINPPLGYKKASSKWKIEVKDDQGKMHATYFGP SQTPSQYLLSTKSKLQDDSTATNLAIRTASKITHIDPDAKTFVQRVIIDLRGYTKKEKVN VQITPKYKRVEKDRPGVKPDTIEEGLKTAYRTTYKISNPATKLDTDYILGYYDLSKKGVS MVNTARWRPFDWGFDEDQLNLDPGEVYFIDIEGYYDESLISGMAVNEKDVNGKPVAPHKN TKIKPEDLAKLEMDIKFYEGARNFYQAIYNEKTQKIEWKTFPKASYQAGAAALANIKEQG WLYKPYNDRYENWVGLEGGKILPEFANETPLKTLSTKADISDLYTTDNPKDKLEIPKEGL DIINDEETYNITFSKHGRDGEKSDGWESNGKKVTENRLEGAIFKLQQYIQNDYVDVPGSY VSSAFNGYFGFRGLKPGRYRLVEVEAPKGYRPIRDAILYMTVSYEEPKTNVETGEITKGR GRITLEYDNGNGIIEYNPAATTVEQGKLVDYVTSATAKNMGKIINEKPGQGKVRINKEDG EGHPLEGAKFRLTRLGTDADTNPDSTGNEDGGYIATSENLNETATATVAKKDEVNPVVKN GKVLTLDPVRVGAKKINGETISNAKVTVTFPGGKTVEIKTPNSGKFTVDVPRDIVLKEND IITASINELGVAIFDKLPIGNYILEEIESPKGHKSNGQKWRFTVGGDGLDPYVNDTSTGG KDLTDKINLDDVNIKVQKTLDDDKTDTETSVHPHKAQSIGITAKFKVPVDQEINPGDHFT VKLTKSVDLYGIYKDKPLGSLDIFADGVGTIAKAKYDKQNSEITYTFTEYAKTYTLTEFK TNLATWINLDNIKKSTQNVEVGIGLKGKQKHSKNYNVVYDIPAETSRHPYKYTEYYRYWY GTDYQTYNYWHNLTGKITEMDKTTGEFTQYYYINRMKDKGWKNWTFRYNPYSSDKTNTKR LSYANVRVMKLKDNSDANIARSMPESFALDINNDSNLTEIYNQRFDRMGATSFNFSGYKE GNQPNGYMPNAGSDEGDSYIVEVKGKIPLSEIKEFESVASIIVRGYTIAARWDLARFEEN KAVANAQLIIQAINPKNEIKFKKQDVDGKALVGAKFALYKKNGDSWQKTNDPVQTTKEDG LISYEKLGPGDYALVEEDAPDGYNKIEGHAAEFNVSELGIITRKVKKAKPVGNAQGDTSE TPAKPDEYIDELIGDIPVDVVNFRNVDFVKLDKNDKTKKLANAKFAVYYKQKENDTYQEY KEKTTENNEEVEKPKVVSSDKDGKFKLELNKNGYYALKEIDPPSGYARINDFIHEFMIKD GRTLAKVANPLKSSYYKSGKGYITSEVLSVDKDKKTFKQRLIINPDHKELTMKEAQSYLR IMENGWEIKPRGDTTKDQKGGKIMVAVLKKDGNKTIDGLEAKDFAPHYAARSGPLGDNIG SRYSLRELYGLNKDGEVSTTDSLVVEYTGKLKDESIKKDEKTQVETLLPVDQLEDVILDY TVISELKYKLDLTNLAKEGPAYVDVNVAKTSPTEIENEEIHKIKFRKIDAIAKEDGTKTP LEGAEFELWYKEKEGDKKVQLHLYQRGDEKMWFKDGETVPQDYTGSNDKITSPQDGIVEL DGLYKPGYYFIKEVKAPKGYSLPLTEDKIVKEFVIKKGKVYQKDDLEAETKAKKPMMKVT RKKENNNVHYTFEINPEGKAVANKDARLIFENAKLGSPVSLKVTYGNASEELSTDKFNGV IDLSKYFLEINKDNPSTSRTKITIDYVAHPSGSEDITVKSVLKGVDDTDIEINDTFSMKA LETTESPSQGKSYVYKPYEEPKADNSNLVEIENRKVELPKARGVGDALTYTLAGLAVMLL GIYVYYRKKKVVA >gi|229269865|gb|GG666046.1| GENE 6 24947 - 25219 199 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTIGRRRWSHDFLDKKKGPPTLTEPDSWLWGMYSKSNSEHPRCHSERKRSLSRAKSRER IPQSRKKNERRETILNTQRRFEGSIMPLGT >gi|229269865|gb|GG666046.1| GENE 7 25425 - 25661 62 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486111|ref|ZP_03916427.1| ## NR: gi|227486111|ref|ZP_03916427.1| hypothetical protein HMPREF0072_1514 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1514 [Anaerococcus lactolyticus ATCC 51172] # 1 64 1 64 78 113 100.0 4e-24 MTKFSFSYYSPLYFLSVSLKISARIFSQKGLRLAFRAGGPAAYRVGVLWDIPSGPSYKWF DLLCLRAFALCALLLALA >gi|229269865|gb|GG666046.1| GENE 8 25640 - 28096 2970 818 aa, chain + ## HITS:1 COG:no KEGG:SAG1407 NR:ns ## KEGG: SAG1407 # Name: not_defined # Def: cell wall surface anchor family protein # Organism: S.agalactiae # Pathway: not_defined # 118 818 51 705 705 319 39.0 3e-85 MKKKILSLLTAFAMVFGILVAPFTTASANNANEPGAHKTKVLIHKILMQEHNWNAKKVTL TTTAEPKTSESKVIVKKGEGDSAKYYDAKNMNSELSADNEFVKGFKGEPVDNKKAVAKEV FPGLTGLDGTEFKGQKLTVGEYFGSDSKPINGVAFRIFEVYTGKDSNPSGYTLGSELMTT YKLATNDLESTKYYKLVTEGATDGVFTTARVDNEDGIATASLADGTYRIVEDKAKSTYKG ENGETLTGRKAVPFTLVLPIGKPDGSGNYSETEPLNLYPKNTEKKVKFDKNFAKENGLEK ITDKNTLKDVGAVFDNYNKEKANAKGEIGKEIKYEAKAFLPKGSVFTKLHLADSMDGGLE YDSKKGVTVAVNPTLNPALDATSDYTVKTIGNGFDITFNQTGIDKLNKAAETSDVNITFT YSAKVTAKAVNDRPMDNHATITYNHTPPAPSSETVKPKDGEITVSKTWADGTAPTGVKVK YVLLDENNNALADVTFTDKSTVDQTDLGHGITFEKTGDFAGKFKFKNEEDKAKQYKIKEI VDGYEPEYVVDNNSGKVTVNNKKTPDSITPTPPQVTVGGKKFVKVDSETGDRLAGAQFVI ENNNTSDATNNGKYLKINADTSSTAYTTAAKAYDDAIKAVNDALAKGAISATNKVKIVTD EFDTKDKALAKVAELQKTRDKEFVKAKLNYTWVQSKDEATQFYTNKDGQFEVTGLAYGDY RAVEIKAAPGYALDTNPENFKFTVADGSYTGPAQGVTAEHIQYDATNGNDNNKAQKIVNK KVTIPETGGIGSLIFIVAGLAIMTGAFIAYKKSQAVEA >gi|229269865|gb|GG666046.1| GENE 9 28613 - 29125 495 170 aa, chain + ## HITS:1 COG:FN1254 KEGG:ns NR:ns ## COG: FN1254 COG0778 # Protein_GI_number: 19704589 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Fusobacterium nucleatum # 1 170 1 171 171 105 32.0 5e-23 MDFIELAGERFSCKSYDGRKVPEDKLGLILEAARLAPTAKNLQNYLIYIAESEEALNKVD EVTPCRYGASTVLILTYDESKVFTYPGGKYDSGFEDTAIVASHIILAAQSVGVDSCWINN IDPDEVKKVFNLSDDEVVVCLIDLGFRAEGAGPLANHHKRRSVDEIGRYI >gi|229269865|gb|GG666046.1| GENE 10 29584 - 29820 357 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486114|ref|ZP_03916430.1| ## NR: gi|227486114|ref|ZP_03916430.1| hypothetical protein HMPREF0072_1517 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1517 [Anaerococcus lactolyticus ATCC 51172] # 1 78 1 78 78 97 100.0 3e-19 MKNTNSKKLKLYFKDANNTQRTVTIDQAKDTYKDADVSAAMDKIIESQVLETKKGLINSK ARAEVETIEKAALDVIQA >gi|229269865|gb|GG666046.1| GENE 11 29834 - 30052 409 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486115|ref|ZP_03916431.1| ## NR: gi|227486115|ref|ZP_03916431.1| hypothetical protein HMPREF0072_1518 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1518 [Anaerococcus lactolyticus ATCC 51172] # 1 72 1 72 72 102 100.0 1e-20 MKIKIKFEIKGNEGSANKTYTKTFIQVNEKSTNDNLMKFAAAYLSLVNGKDNKIAYSIYK ANEEEVYSGSVN >gi|229269865|gb|GG666046.1| GENE 12 30208 - 30510 396 100 aa, chain + ## HITS:1 COG:CAC2242 KEGG:ns NR:ns ## COG: CAC2242 COG0640 # Protein_GI_number: 15895510 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 10 100 31 121 122 89 53.0 2e-18 MKVDIGKISDNDLSDLADLFKIFSDSTRMRIMYRLFDGPVSVGDIAESLDMSQSAISHQL RNLKKNKLVKSERDGKSIMYSLLDEHVKLIIKIGLEHVCE >gi|229269865|gb|GG666046.1| GENE 13 30523 - 30747 358 74 aa, chain + ## HITS:1 COG:CAC2241 KEGG:ns NR:ns ## COG: CAC2241 COG2217 # Protein_GI_number: 15895509 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Clostridium acetobutylicum # 1 67 6 72 699 61 43.0 3e-10 MKKKYTIEGLDCANCAAKIEEALGKLDGVESATVSFLSEKVKFDLRDDVDLDKLLAKANE IADKIEPGSKILVD >gi|229269865|gb|GG666046.1| GENE 14 30748 - 32598 2041 616 aa, chain + ## HITS:1 COG:PAB0626 KEGG:ns NR:ns ## COG: PAB0626 COG2217 # Protein_GI_number: 14521140 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Pyrococcus abyssi # 14 613 87 689 689 442 42.0 1e-124 MLKSITNDHKQTFLKLVLIVILSFALQYFASHIAWVNGYILKLWFLGLYLLAAWDVLKEA FEGLRRGKALDENFLMTIATVTAFVIGDYLEAIAVMVFYGFGELFEEIATHSSKENIKGL LDLVPDLANRVLEDGTVEEIDLDDVEVGDILMVRDGEKVGVDGLIVEGVALVDTSSVTGE SMPVEVKAGDEIISSSIITQGIIKYEATKEFDDSVAAKIIELIEDSHMSKSQSERLITRF AKVYTPIVVGFAILLAIVPPLLMGGAWSDYLLRSATFLVLSCPCALVLSVPLSFMSGLGL ASKEGILIKGSQYFEELISADILLTDKTGTLTTGEFVVKDIEFLADYDRERALDYIYNIE KLSTHPIARGIVNSMDRMENPDLFESVDNKSGLGVVAITKTGEEVKIGSARFIGIENDQV RAVYLGVDGRAIARVIIEDEIKKDSKNTIQSLKKDFKKIAIVSGDAKGPVKDLAEELDLT DYYAELMPKDKLDVMKDFKAKGHKVVFVGDGINDAPVLKNANVGISMGETASDLAIESSD ILVANGEFSQLAKLMKIANLTNSTVMQNIFFIMTVKIAILILGLLGIASMWLAIFGDVGV SIISIIWAMRILKIKL >gi|229269865|gb|GG666046.1| GENE 15 32694 - 34067 1021 457 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145629959|ref|ZP_01785741.1| 50S ribosomal protein L21 [Haemophilus influenzae 22.4-21] # 1 440 3 442 456 397 45 1e-109 MREIIESFNDFLWGLPLILGIMGTGIYMSIRLKGVQFRKLGFALKHTLGRIFAENDEADG DISPFSALATALAATVGTGNIVGVSLAIIMGGPGAIFWMWVAAIFGMATKFAEVTLALAY REKRSGSFVGGPMYYIEKGLKNKKLAKAFALFASIAVFGIGNSTQSNAIAGVLRDNFGVS TLVTGLVLSIFAGIVIVGGISTISKVTGKLVPFMSLFYILGSIWIIFLNRANLIPAIESI FVGAFAPMSVAGGVAGITVRSVISAGVARGVFTNEAGLGSSPMAHASAATDHPIRQGLWG MTEVFVDTMIICSLTALVILTTGVDRSVGVDARSLVASAFASTSSIGGLILSLGISLFAF STILGWAYYGELASSYLFGEGIKKYYRIVYVIFVFVGANMDLGLAWTVSNILNGLMALPN LYAIWRLAPVLVKLEKDFFKDPMKMRKGPEEYSELLA >gi|229269865|gb|GG666046.1| GENE 16 34199 - 35026 794 275 aa, chain - ## HITS:1 COG:ECs4632 KEGG:ns NR:ns ## COG: ECs4632 COG0561 # Protein_GI_number: 15833886 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Escherichia coli O157:H7 # 2 269 3 270 270 171 32.0 2e-42 MIKLITIDVDGTLVTPLKRLTQKNIKEIDRVRDLGVHIALASGRPFHSMERYIERLGLME EGHFSVCQNGSYIVDNATKKPIAGSYQTVEDLIRLDELMADFDVQVSAMDDVGFYTRHKN PSIYTQMDAVINSLTLTTVNYKDFPEDMRFGRFLILGSRASIKQVLANMPKEVSENYYAV QTAPFLIEVMNKTANKGHAVRQMAARLGISADEIMSIGNEKNDIPMLEQTGFPVAMANSV PELKAHAKFITKSNLQSGVGYAVERLIDNGLKRFQ >gi|229269865|gb|GG666046.1| GENE 17 35127 - 35603 561 158 aa, chain - ## HITS:1 COG:no KEGG:Apre_0406 NR:ns ## KEGG: Apre_0406 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 149 2 150 161 91 36.0 1e-17 MENKIVDIDLRIVRTNKMIRRVRQVRAMVKLAMKNMDNQYAYSTSDWLRGNILGDFIRKK RTDKLNSLINKVQQAMLDLESDLLVYDENLARSLRLPSRMAEAGKVTGIIDDIALRSKMR YKKFDVAKSLRNLDKVLARLEEDKNKLKFMKKDQKGLV >gi|229269865|gb|GG666046.1| GENE 18 35711 - 36280 808 189 aa, chain + ## HITS:1 COG:no KEGG:Apre_0405 NR:ns ## KEGG: Apre_0405 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 189 1 189 189 183 58.0 3e-45 MAEILFYNTHLAKDYDKFKEICNENDVDIIEVGQDHVDHYVGYLLGLDGFSEEKKAGINE SINIDFDFVLFSNFDHEKMFKVMDELRNSGASVQHKAGTTQNNVTWSLRELLIENDKEAR TMGLINKINIQLEKASSLKQAYGEDAKTKELIEEIKGFFQDASIFSIDKAKDYYLKLMDE NIRVENENK >gi|229269865|gb|GG666046.1| GENE 19 36482 - 37591 1699 369 aa, chain + ## HITS:1 COG:BH2329 KEGG:ns NR:ns ## COG: BH2329 COG0686 # Protein_GI_number: 15614892 # Func_class: E Amino acid transport and metabolism # Function: Alanine dehydrogenase # Organism: Bacillus halodurans # 1 368 1 367 378 358 53.0 1e-98 MIIGIPKELKDQESRVAAVPGAVADLVKNGIEVLVEAGAGVGSGISDSDYKEAGAKVLDS AADVWEKSDIIYKVKEPLKDEYKYLREGLIIYCYLHLAGNEELLDELLKKKVTAIGFETV IKDGKLPLLRPMSEIAGRMAVQEGARYLTKPEGGRGILLQGVPGVRPANVVIVGAGTVGT AATRIAVGMGARVTVLDVNIDALTSLHNIFPDKIETLYSNPLNIDEAVSGADLVISTVLI PGRRAPQLVKVDTVKKMKEGSVVVDVAIDQGGSTDITKDHATSHTHPVFKEYGVTFYAVG NIPGAVAMTSTYALSNATTVYAKALGKYGFKGAIEKFPELATGINTHKGEVTIESVAKDT GHECKALEI >gi|229269865|gb|GG666046.1| GENE 20 37690 - 38127 591 145 aa, chain - ## HITS:1 COG:SPy1055 KEGG:ns NR:ns ## COG: SPy1055 COG0229 # Protein_GI_number: 15675047 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Streptococcus pyogenes M1 GAS # 7 145 5 143 145 185 61.0 2e-47 MSKYNKDDLKKILTDIQYEVTQESGTEMPFSSEYDNFYEDGIYVDIVSGEPLFSSKDKFN AGCGWPSFTKPIDGTDLTEKDDFRLMRKRIEVRSKEADSHLGHVFPDGPKEATGLRYCIN GAALRFIPKNKLKEEGYGKYLEIFE >gi|229269865|gb|GG666046.1| GENE 21 38235 - 39455 1454 406 aa, chain + ## HITS:1 COG:FN0334 KEGG:ns NR:ns ## COG: FN0334 COG1448 # Protein_GI_number: 19703677 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Fusobacterium nucleatum # 8 406 7 412 415 233 36.0 7e-61 MTMTIQKSGKTGPDLAFAINAKVKQAQAKFGKANVINAVLGTLADDEGNIIALDSFYKRL ETMDRGLIASYAPIEGEKTFRDTVINLLFEDYRPDAYIEAVSTPGGTGAIRNGIFAYADI GDPVICHDYFWQPYQKMCREFDRDFRTYNFFTKDFKFDLASYKKCQDEALKEHDRLVSII NSPGNNPTGYSLSDEEWDKVLEISKEAVARGKKITLLIDVAYIEFAGDGEQKKFFNKFSK LPENLMVLVAFSMSKAYTAYGLRSGAVIGISSYKQVIEEFKDAMATSARVNWSNGVHAPQ LILVDLAKEENKGKYDKELASLKAMLKERADVFVGEAAKHNLEIIPYFGGFFAFVPTARA FEITENLEKENIFTIPSAKGIRIALCATNKADVVKLVERIAFYMNK >gi|229269865|gb|GG666046.1| GENE 22 39589 - 39873 614 94 aa, chain + ## HITS:1 COG:BH0561 KEGG:ns NR:ns ## COG: BH0561 COG0234 # Protein_GI_number: 15613124 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Bacillus halodurans # 3 92 2 93 94 85 53.0 2e-17 MNLKPIGDRIVIKKAEAEKTTASGIVLPESAQEKPQYAEVVAISTDIENDEKKKGSLKVG DKVIYSQYAGTDVKLDGEKFIVVKYNDILAVVEG >gi|229269865|gb|GG666046.1| GENE 23 39884 - 41500 1586 538 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 529 3 531 547 615 60 1e-175 MAKDIKFGTDAREGLERGIDKLANAVRVTLGPKGRNVVLDKAYGAPTITNDGVTIANDIE LEDRFENMGAQLVKEVATKTNDVAGDGTTTATVLAYSIIKEGLKNLAAGANPIVLNKGLK KATDIVVDYIKENSKEVEDKQAIENVGSISSQDHAIGKLIADAMEKVGNDGVITVEESKT TGTYLDLVEGMQFDRGYLSPYMATDNEKMIAELADPYILLTDKKISNIQEVLPLLEQIVQ ESRPLLIIADDVDGEALTTLILNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGKVIS EDLGMDLKEATIDMLGSAKKVKVDKDNTTIVEGKGDKEALAERVENIRNQVAKEESEYEK EKLQERLAKLAGGVAVINVGAATETEMQEKKYRIEDALSATRAAVEEGIVAGGGVVLIGA IEKVEELREKLIGDEKTGALIIEKALEAPLRQIVENAGLDGSVIVEKVKNSGKEEGYDAY ENKFVNMFEAGIVEPTKVTRSALQNAVSVAGMILTTEAAVADIPKAEPAMPAPQMPMY >gi|229269865|gb|GG666046.1| GENE 24 42292 - 43212 1395 306 aa, chain - ## HITS:1 COG:FN1169 KEGG:ns NR:ns ## COG: FN1169 COG0039 # Protein_GI_number: 19704504 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Fusobacterium nucleatum # 2 299 6 306 318 206 35.0 6e-53 MKLGIIGAGAVGFAVGYTAARMGIASDIKYNDIIEERAKAQAMDIEDASSFYPHYVKMSW GSYKDMADRDIIVTATGSLDGVRDRLEEYEMFKDATEAYVKEIVKAGFKGIFIVVGNPCD LMADLVYRASGFPKERVIGSGTALDTTRLNTTLCKLLEIDPADVRGVVLGEHGESQFVAW SNIFINNLTFEEYLKQNPASFSRDDVENLVRERAWRVIDGKGHTQCGIGNTVCSMIDAIV NDRKKVILVATLMEGMYGLDDIYLSTPCVLGKDGMEKAIELKLNEEELSRLKHSEKVLKA NREKYK >gi|229269865|gb|GG666046.1| GENE 25 43364 - 43741 536 125 aa, chain + ## HITS:1 COG:CAC0599 KEGG:ns NR:ns ## COG: CAC0599 COG1725 # Protein_GI_number: 15893888 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 1 124 1 124 125 112 43.0 1e-25 MFLEIDFKSDLPIYEQIRRGIIIGLANGQINPGDKLPSVREMAENIGINLHTVNKAYKLL EADGVLTMDRRYGSLISEEKNAMKDFDADKISGELDYLLAICKLKGLKKEDFINHINKKW ENKND >gi|229269865|gb|GG666046.1| GENE 26 43734 - 44828 1021 364 aa, chain + ## HITS:1 COG:CAC0600 KEGG:ns NR:ns ## COG: CAC0600 COG4194 # Protein_GI_number: 15893889 # Func_class: R General function prediction only # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 29 362 29 370 372 102 26.0 2e-21 MTEARFIAINYTFVLILVGIIQVFVQTFSKKGYTLGVSVPKDVTETETMKQILIDYKIMA LTMTIFLGLGQYFLSYVTKSVGFLTLFFFISLGLLSLPLIIYNKNLKNMTKGLSQDKRKI IVIDNNEGKADLRKIMAIFYGASLLLIILVSLFLFINYDKIGNQIIMQTDFEGKVTRMGD KTYLNVFYPSLISLASLAMFYYINLMVIKVRPRISKENPEKSLANNRKAKKIWTYYIGIN AFVMTLLFEVGVNFLALKNTNLPLYILTIITIILSIGGVIYLGIKVGTDGSRLDKMEDFS FEEDDKYWILGAGFYNNPDDPAIFVPKRIGVGYTINIGRPAGKVIMILTALIIIFSIVSM FIFN >gi|229269865|gb|GG666046.1| GENE 27 44959 - 46113 1890 384 aa, chain + ## HITS:1 COG:SA1524 KEGG:ns NR:ns ## COG: SA1524 COG0281 # Protein_GI_number: 15927279 # Func_class: C Energy production and conversion # Function: Malic enzyme # Organism: Staphylococcus aureus N315 # 1 379 1 379 409 425 58.0 1e-119 MDVYEIALKKHEQWQGKVATEVKAKVENAEDLTYAYTPGVAEPCRKIHEDEKKAYVYTSK ANTIAVVSDGSAVLGLGNIGPKAGLPVMEGKAVLFKEFGDVNAVPIVLDTQDADEIIETV KNIAPTFGGINLEDISSPRCVYIENKLKEILDIPVFHDDQHGTAIVTVAALINALKIVNK NVADIKVLISGAGAAGYSITKLLLDLGVKNIIACDSKGTINKTHLEGSNPVKAELAKITN KDNLVGSLKEAIKGCDVFIGVSAPGVIDENDIKNMAADPIVFAMANPVPEIDPALAKEAG AKVVATGRSDYPNQINNVLAFPGIFRGALDAHAKEITDSMKLAAAKALAGLVSEEKLSAD YVIPGAFEAGVAEAVARAVKAEIK >gi|229269865|gb|GG666046.1| GENE 28 46554 - 47369 1097 271 aa, chain + ## HITS:1 COG:lin0298 KEGG:ns NR:ns ## COG: lin0298 COG0561 # Protein_GI_number: 16799375 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 6 271 3 269 270 126 30.0 5e-29 MKKDIKLIAFDIDGTIITKDGRVLEETKKIITDLKARGIKIVLCTGRNFNGFYWIREGLG LMDFDDYSITCTGAFVRQNATGKAIIKKTLSPADVEKIAAKLDNDKIDLTIHTRDILYNK AKTPNKHFRYDQGLMKMPWLRYESLADIHDDLARVSFDSDFDTLNDFEDRHKEEFKDSYK YMRNEKTIIEILNKSAGKSETLSELADLFSIKMEEIMYFGDGANDLKSIKAVGVGVAMGN ARTMTKEAADYVIGSNDEPSIANFLKDYFND >gi|229269865|gb|GG666046.1| GENE 29 47362 - 48153 980 263 aa, chain + ## HITS:1 COG:CAC3538 KEGG:ns NR:ns ## COG: CAC3538 COG1235 # Protein_GI_number: 15896774 # Func_class: R General function prediction only # Function: Metal-dependent hydrolases of the beta-lactamase superfamily I # Organism: Clostridium acetobutylicum # 3 261 2 259 261 208 40.0 7e-54 MTKFVVLSSGSSGNSVFIEHDGTKILVDAGFSGRQIERLLESVGESATKLDGIFLTHEHA DHAKGAAVLAKRFKIPLFANRGTWKAILPTTKNFSEELIGEFKSNEFLNFKSMDIYPIST YHDANEPVGFVLYLGNKKITLLTDTGMIDDKIAYQIQGSDIYYLEANHDLEALKMGPYPY NLKLRVMGKMGHLSNDQAAEILGDALEGRGESVFLSHLSTTNNTEALSLITVETYLKSLG LDTDKDIKLEVSKRYEPSRKVIL >gi|229269865|gb|GG666046.1| GENE 30 48150 - 48962 804 270 aa, chain + ## HITS:1 COG:FN0868 KEGG:ns NR:ns ## COG: FN0868 COG0037 # Protein_GI_number: 19704203 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Fusobacterium nucleatum # 5 256 20 269 277 234 45.0 1e-61 MTDIKEIEKSLIKKYRKEIWSPFIKAIKEFKLIEEGDRVGVAISGGKDSLILAKLIEELH KHGPVDFDVEYLSMDPGYDEENLELLKKNLAYLQIPGKIYDSRVFDISETLADGGNPCYL CARMRRGFLYAKAKELGCNKLALGHHLNDVIETIMINVLYAGNYKTMKPKLTAQNFDDML LIRPLYYLREEDIIRWRDFAELKALDCACTVTKSSESHTRKKVKDLIADLKKDNPNVEMS ILRSSENVNCDMVLAYQIKGEHHTFMEEFQ >gi|229269865|gb|GG666046.1| GENE 31 48959 - 49831 1161 290 aa, chain + ## HITS:1 COG:FN1702 KEGG:ns NR:ns ## COG: FN1702 COG1968 # Protein_GI_number: 19705023 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Fusobacterium nucleatum # 8 274 2 254 266 222 52.0 8e-58 MIINLIKVLILSLVEGITEFLPVSSTGHLILVNQFVKLEPEGFSNAFNVIIQLGAILSVV VIYFEKLNPWAKSKQELPKKYKDLNAQSKAYYLATHPDKTTINLWLKVIVGVLPAMVLGL LFDDLIDAYLFNPITVAAMLLLWGIIIIFIEKKNKTIKYDSLKDVPYTTIIMIGLFQCLA MVPGTSRSAATIIGAMILGLSRPAAAEFSFFLAIPTMLGATLLKLIKNLGDFTGTEWTLI LLGMILSFIVAFIVIKQFLAYVKKHDFIPFGIYRIILAVIVFVYFLLINR >gi|229269865|gb|GG666046.1| GENE 32 51002 - 51505 416 167 aa, chain + ## HITS:1 COG:no KEGG:Apre_1260 NR:ns ## KEGG: Apre_1260 # Name: not_defined # Def: RNA polymerase, sigma-24 subunit, ECF subfamily # Organism: A.prevotii # Pathway: not_defined # 2 166 3 167 171 133 43.0 3e-30 MININKAERIMGDYMPLILATVRRFDAFEREEAIDEAKMVLVEAIVSYDEDKGTFGNHLK HRLNYYFWDKAKKPRPTSLDIVTEKGQSLVDNLISDDDIEDDFFTKEAYKDLYANIKKLD RKDVVIIKLKYWERLSDKKIAELIGLSSKTVRNRHSLALKKLRKMME >gi|229269865|gb|GG666046.1| GENE 33 51651 - 52148 539 165 aa, chain + ## HITS:1 COG:no KEGG:Apre_1262 NR:ns ## KEGG: Apre_1262 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 154 1 154 160 130 48.0 2e-29 MFTDIIAIMPEQVKGKGIYSRIYKEDESILDQRTPALFLKNLYEEKGKSKKQMDKKIKAT YQIYRNIPYVIDANQVFFPFKIRNTPFAENNRAFINVKYVSKIKDTTIVLVSGEEIQTLS NNKSLIQNRNLAKALHLEEILVKTLERESSMRYVMAYLRKEGYPR >gi|229269865|gb|GG666046.1| GENE 34 53452 - 53628 70 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486141|ref|ZP_03916457.1| ## NR: gi|227486141|ref|ZP_03916457.1| hypothetical protein HMPREF0072_1544 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1544 [Anaerococcus lactolyticus ATCC 51172] # 1 58 1 58 58 110 100.0 4e-23 MVREGAGAFTKGLHTWCGKRNELCRKIVDIFAENLEIFTNCINVLTMWRNYCKIINVK >gi|229269865|gb|GG666046.1| GENE 35 53681 - 54919 2077 412 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486142|ref|ZP_03916458.1| ## NR: gi|227486142|ref|ZP_03916458.1| possible pneumococcal surface protein A [Anaerococcus lactolyticus ATCC 51172] possible pneumococcal surface protein A [Anaerococcus lactolyticus ATCC 51172] # 1 412 1 412 412 418 100.0 1e-115 MKMNKLAAGALALALGLGAVAPAVASEHGTKLVEVNYNERLAEAQKYFAQREDARKKSAA AKERYEAAKKAQEKAEKKYKDLDEDKPGSGSETSDVIQAKLDGDNGLKAKAAKAIKDYAD AQDGFKKGTKQQSDVDTAKKAYDEAVKALDEALTKLGEAKRKEAENAPDLDKNKLGPKAQ AFVDLDHANQELRLAYKAYGEALDKEAVLSKKFKDTMDDLKTAAELVNKVVTIEGSKIVV KDGKTDAKKSVAEAVKALKASIDDNKAAVKSAEFLLQNAPKSVAKVKAKLEAQIVKAKAA ITKGEAALAKVEKKMAFIATAYAAEDDVKVEDLEALTKENKESASDINNTIKENEKEQPA VEEEKKPEEKKPEENKPARKAGKNAKTGIAGIAGVAGILAAASVAYAASKRD >gi|229269865|gb|GG666046.1| GENE 36 56152 - 56946 781 264 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486143|ref|ZP_03916459.1| ## NR: gi|227486143|ref|ZP_03916459.1| hypothetical protein HMPREF0072_1546 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1546 [Anaerococcus lactolyticus ATCC 51172] # 1 264 1 264 264 467 100.0 1e-130 MVMKFKVFSLVLSFSLIAPSFAFAADAGVDARIKELDKEIDKLEYEYKGFGEVFDKASQS SKAYIDERGNFVPHDKAVMENLLKVSSKLDEFVDNVTPSLEQPMLGVYFANGAKLDGFNI RKNNANDLYLYLKKHFVMKKGKDKAVYDSLLREYVNAISDLVLLPDLSKVTDSLYGQMTK RKEKLDKARALRRYYKREKYADVIKKLEDAISESETTVKSCRQLMEYSPKTIAKVRGKLE RMLVDQEALIVRSKRALSRFVDGL >gi|229269865|gb|GG666046.1| GENE 37 57031 - 59979 2982 982 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486144|ref|ZP_03916460.1| ## NR: gi|227486144|ref|ZP_03916460.1| possible surface anchor protein [Anaerococcus lactolyticus ATCC 51172] possible surface anchor protein [Anaerococcus lactolyticus ATCC 51172] # 1 982 1 982 982 1301 100.0 0 MNKKLIASLLTLGLILSPVSGQVGSGSMVSEARADESDYSKVISPSDRIKASIADYEKYK NTNLYRLASKEYKDEIYKVVDLAKEYIGKNSVSDSDLKDISEKLHDASQNLIKSSQSNLY NFKAKILNAEKVLRDNVDKNTTEESKEEFEKIDKIIKDSKAKLKDDQLAKLDGEELEKST NEILGLLEDAKTHQNFKYENYHPTDEEVKKLDAEINNENEEISEEKFKNLANDIKKLVDS NEDFKNSARYKLASKEAITAYTTAFDKIKDLTEINKDNYYKTVELVKTVARARKAIEDKD LDLSVTKTNPDVDEIMAKFKAHLANSEKLLEKLKDDKLSSAYKEKLALADIYIQNYKNNL KRSSKDYQDLEAELDKLVEQIKKSKGEVEVRPEDKKKEKIEKLDKLLSLAKVLKDTDSYK KEGKPADKKALEDAINEAEYLKTKYGMGEVFVDDDKLSDAINKLEKALAKFERADDKALI KKLIEDLLKSTEGIRIDQIYGKDGKDAKNAYTKAREAAAKAAKDKNMSLSDLTKAYENFK DARDKLAEFLTSRLKKLVDDDSNFVDTEKYKEADRSLDAKDVDAILNYRSLIRDSKEELD KTSPDANKLDLLYKKLDAARREIEGKLSSQARKLTDAILDSDDFMDSLAFKAAATGSDKY LKYAAEKYKADLERAKKLSEAGKLDSKEAEAILESLSKSRDFIEDKISQKAYLIFEYTRT LEEIKNHKDYKSLNQALRKRLEAALDLAHKGGDEDEIFRALDEVMNDDSIKAFIKKIELE KNPNKVRDKLLIELTNLINEDKKLKEGSFKYTKAQKALRDAYDLALKEAKDLIADNKNPK EAEVKAVYQKLLKAKNALDGDKFDKLINDLAARFKKNQLKIASVEARKAIAAKINALSDP KATMDDALRVEKELDDLINPKFAATTTLTPTNQVQTSTRPVSTARNAGSIVKTGINGIAK VAAVLVVAAIILKLTSKKGDKK >gi|229269865|gb|GG666046.1| GENE 38 59976 - 60437 786 153 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486145|ref|ZP_03916461.1| ## NR: gi|227486145|ref|ZP_03916461.1| hypothetical protein HMPREF0072_1548 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1548 [Anaerococcus lactolyticus ATCC 51172] # 1 153 1 153 153 142 100.0 7e-33 MKITNKQIIAAILIAATLTGCDSLKNKLKNSDDTKVEESTNEETTKKEGAEDAENTGSTE KEDKKDDSEDKSSEDKSSEDKSSEAETEDGNTVVEQLEDAVFNNRVQARAAEILLEETPE SLSEEYKAKLKELVEKSNDIIERSEKALEAYKK >gi|229269865|gb|GG666046.1| GENE 39 60540 - 61559 1207 339 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486146|ref|ZP_03916462.1| ## NR: gi|227486146|ref|ZP_03916462.1| hypothetical protein HMPREF0072_1549 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1549 [Anaerococcus lactolyticus ATCC 51172] # 1 339 1 339 339 461 100.0 1e-128 MKKNNLTKAILAMALASAVFAPSVKKSFATDTFYSDYLYESSYLESRRELYKTISDAKEI KNKDRYINASTSVKDSFNVWFKYAEDAYKQAPEYSSLSSEKDKLTRATQYLKEAMKALDG KKSSITDLKDLLDKHTDFTTSSSYLYATQKQKDAYLDAYNKAYRYYYYETYNTVLSEYYT KELKEKRAAIENAYLNERKKVVKDEIDLSEPFRKNSEKYTKKSFDTFLSALKLAETSVED KSNIKTEAEYKQIAATLKSAREALVEVKVKNEELEKYIEKLQTAVDNNKIAVKSGETLLE IAPKQVAPVKGKLINLIKNAKSVIEKSEAVLAKLKGIKG >gi|229269865|gb|GG666046.1| GENE 40 61561 - 62094 515 177 aa, chain + ## HITS:1 COG:no KEGG:Apre_0264 NR:ns ## KEGG: Apre_0264 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 3 176 2 175 177 62 27.0 6e-09 MKIFKKLGVLLLLCNFAFLGLAQTKVSEVYAAETSEEAKYKTQKENLSFAVADSINVIST EAYNNYASSNTKMAYQKAVMDGKAVLQKGDTASFTELAVATSKINDAKSAIWRDVDRAVK IIRLKEAVEQNKVSVRSAKFLLQNAPNSVAGVKGKLINLIKKSEALIEKTEAVLQRV >gi|229269865|gb|GG666046.1| GENE 41 62151 - 63230 1026 359 aa, chain + ## HITS:1 COG:CAP0002_2 KEGG:ns NR:ns ## COG: CAP0002_2 COG5279 # Protein_GI_number: 15004707 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain # Organism: Clostridium acetobutylicum # 185 331 1 138 138 60 31.0 6e-09 MKKKILLILALVFFMVPKTSHAVSQELEEKIIAIDTNKQKESLARARKHLNDKGVSQKKR AKLEKLIDKNEKTIQRIEKLQEIFKDNIRIRNQIRPHLQNRDTYFSVDIGKAITNEKISE LFLDVCKEDDYFFYGQYGSARIDTTYNPAKSVGDKTYIEKANFDVRYRVDIDMEYSTTNF VKNWVAENIDPSYTEYAKVKAIHDFIVKKNFYNKGDRNEESGGVSIYHPASIIFGNGGVC NAYATLFDLMAKQAGLKTRFLTGKSLKNGEDHMWNMVKVMGGWYHIDTTWDDPIINFSDR DIENIEDFVIYDYFLKSDAEIKKSRTINENKTRPQAPTNFPTSPKNTKIEEIDGKYYVR >gi|229269865|gb|GG666046.1| GENE 42 63376 - 64641 957 421 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 5 421 2 426 447 373 45 1e-102 MNKEKKIYHIDDKVPAKLLLPLSLQHTFAMFGASVLVPILFQINPGIVLLMNGIGTLLFI LITKGKAPAYLGSSFAFLAPGTAIIAKQGFEYAQGAFVVVGILGCVMAYIIYKFGIDWIN VVLPPAAMGAVVALIGFELAGNTVTGGAIGANLMTDTAQAKDFIVFGITLFTAIIGSVAF KGFFSTIPILIAIIVGYIAAICFNMVDFTPVVEAQLFTMPNFHMAKFSVNAILAMLPVLL VITSEHISHQVVTSNIVGRDLLKDPGLHRSIFADNFSTALSGLVGGVPTTTYGENIGVMA ITGVYSVQVIGGAAVVSIIMAFFGPLAAFISTIPGNVIGGVTFLLYGMIGTSGIRLLVDE KVDYSKSMNLVLTSIIFIAGLSGLKIQFGSIELQGMVLASVVAVILSAFMTILKKLKLTN E >gi|229269865|gb|GG666046.1| GENE 43 64729 - 64929 180 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPSKTCKSLLDSSVTTLCRDFYPSIRTRPSYSKKPPAVGTQTIDKVLYSRHSDERSEEE SHKFRI >gi|229269865|gb|GG666046.1| GENE 44 65116 - 65496 272 126 aa, chain + ## HITS:1 COG:CAC3514 KEGG:ns NR:ns ## COG: CAC3514 COG3344 # Protein_GI_number: 15896751 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Clostridium acetobutylicum # 1 122 134 255 470 138 57.0 2e-33 MDRIIQQAIVQVLTPIIDKRFSEASYGFRPGRNCQMAITKSLEYLNDRFEWVVDIDLEKF FDKVPQDKLMSIVHEHIKAPDTESLIRKYLKAGIMNKGAYEKSEIGTPQGGNLSQLLSNI MLDKTS >gi|229269865|gb|GG666046.1| GENE 45 66249 - 67181 625 310 aa, chain + ## HITS:1 COG:FN1142 KEGG:ns NR:ns ## COG: FN1142 COG1242 # Protein_GI_number: 19704477 # Func_class: R General function prediction only # Function: Predicted Fe-S oxidoreductase # Organism: Fusobacterium nucleatum # 8 307 3 302 304 279 47.0 4e-75 MSLEINKKRYRDFDSYMKEKFQKKIIKLPLDGGFTCPNRDGSLSKEGCIFCSEAGSGEWT FGKKSIQDQISYQKARLSKEGRVEAYLGYFQNFTNTYGEVARLRKIYYEALSADDVIGLA IATRADCLSDEVLGLLEEINEKYFLVVELGMQSVNDRTLKLINRGYDHETFNLGLRKLKA RGIKVLVHMIVGLPYENFDDYMKDIAYINEAFVWGIKIHNLYIEKASRFEKFYQEKGLAY SMDMAEYVKIVVEILRKLRPEIVINRLTGDGINDKIAYPLWSKNKAKILTSIDKMMKDKN FRQGDLWKEN >gi|229269865|gb|GG666046.1| GENE 46 67166 - 67771 733 201 aa, chain + ## HITS:1 COG:PA3846 KEGG:ns NR:ns ## COG: PA3846 COG1335 # Protein_GI_number: 15599041 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Pseudomonas aeruginosa # 26 193 8 175 180 92 32.0 4e-19 MERKLDKRFFTNSLSEEGTYTAKDRSLLLVVDIQPKLMVTMDKGERTTRNTVGLIKAFKK YDMAVLATEQYPKGLGRSDEEILAEIEEDKIFAKTSFNALTPEVYDFIKENKIEKVFVTG AEGHICIYQTIRSLLDLGLDVFYVDDAISSYSDELKKIARKSLRDMGAVLVNTELILFDL AVDSKDPNFKFVSNLVKELRK >gi|229269865|gb|GG666046.1| GENE 47 68630 - 70612 2587 660 aa, chain + ## HITS:1 COG:lin1343 KEGG:ns NR:ns ## COG: lin1343 COG0021 # Protein_GI_number: 16800411 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Listeria innocua # 1 656 1 662 664 720 56.0 0 MFNKDDFKAVNAIRTLSIAQIEKANSGHPGLPMGASPMAYALFNKVLKANPSNPSFFNRD RFVLSAGHGSAMLYALLHLSGYGVGIEDLKNFRQIGSITPGHPELGLTPGVEVVTGPLGQ GIAQSVGLAAAEKHLAGLYNKEDIKIIDHYTYAICGDGDLMEGVSYEAMSLAGHLKLDKL IILYDSNDICLDGNLSTSFSESVKDRVLAQNWAYDRVEDGEDLEAILKAIEKAKENDKPS LIEIKTVIGFGSKNQGTNKVHGAPIGREDFEFAKKAYEWEDDDFVISDDIYETFKNGIGK RGAEANAAWDKLLEEYAEKYPVDYKELMAGINRELPENFLDQVKKYSHEDKPIATRASSG EILQDLAKVSRNIWGGSADLFSSNKTNIVDSVSFKDDPAGRNIWYGVREFAMAAIGNGIM AHGGSFHHVSTFFVFADYLKAAVRLSALSNLPLSYVMTHDSVAVGEDGPTHEPIEQLAML RSIPNTLVLRPADANETRLAWKIALESKDKPVVIALTRQNVPNLEETEGLKSIEKGAYII KDVENPELILIATGSEVAVAIECAKVLEEEGKAVRVVSMPSMELFRAQDASYKEKILPSE VRNRVSIEMGTSFGWGEFTGLDGLNISIDRFGISGPGGDVAKKLGFNTEDIVARIKQKFY >gi|229269865|gb|GG666046.1| GENE 48 70701 - 71282 765 193 aa, chain + ## HITS:1 COG:CAC1629 KEGG:ns NR:ns ## COG: CAC1629 COG0693 # Protein_GI_number: 15894907 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Clostridium acetobutylicum # 1 186 1 183 188 148 47.0 5e-36 MKILELLADGNETIELLTVVDYLRRADIKIDMVSTTGSKDLVTSHGVRYQADYLLEEINP EDYDGVYIPGGTKGAETLRDDDRVIEIVKKFEAANKLIAAICAGPIVLDKAGVLADKKAT SFPTIKQELKNVGEYMDDEIVVTDGNVTTGRGAAVTNYLALRLIELIKGKEAKEEIKYGT QHVAVENYFDIEF >gi|229269865|gb|GG666046.1| GENE 49 71290 - 72285 1171 331 aa, chain + ## HITS:1 COG:no KEGG:CAR_c22350 NR:ns ## KEGG: CAR_c22350 # Name: not_defined # Def: hypothetical protein # Organism: Carnobacterium_17-4 # Pathway: not_defined # 6 297 3 294 324 162 33.0 3e-38 MKNVRKIFILGGANLFAKTIIKYALELGYAVKAVDLIRPSDLEGLPNLEFFLQDFFSLSD AEAIKLMDDCDSFIYAGGVSDLSVPRKPCGKFFYERNVLPTGRVARLARRAGIKNFLLLG DYKTELAEKNISLRENGYHKEPYIQTRFMQEAIANFEAEPLMNVSVLRPGVVIGKANKSI LEAHIDLVKANKKIPVTKGVIPIISADALAKAAIYALELEGDKKTYVVATSKISYKEIYE KIIEVMEKTGEKTLVEKTFDDLLPAYEKDMKITDNKGLEHGISQVNMLRTMTMDLSLKSD FDLGEEDLTENLTEMINLYLKGTPVKAKKQE >gi|229269865|gb|GG666046.1| GENE 50 72317 - 73495 1263 392 aa, chain - ## HITS:1 COG:FN0793 KEGG:ns NR:ns ## COG: FN0793 COG0786 # Protein_GI_number: 19704128 # Func_class: E Amino acid transport and metabolism # Function: Na+/glutamate symporter # Organism: Fusobacterium nucleatum # 4 391 5 398 399 282 43.0 1e-75 MTLQLDILQSLGIAIIALVLGNLAKNKFSFLKTFFIPSPVIGGLIISILVLILKETKIAS VEFDKILQDFFMNIFFTAIGLSASFSMLKKSGVLGLKLALAIIILLPLQNLIGVGLAKIF GINPLHGIAMGSTSMTGGIGSAISFGKIMEKMGAESNITIGVAAATFGLLAGSLVGGPTA RRLIAKNNLQSKGALSRDTLADIKAITNQKTLTKAIIIIGLAAFLGTFINKILAKTGLNF PYYVGCQFGGLIVRNVYDFIKKPIDMDNIDLVGNISLSLFLSLALINLNISAILTLAGPM LVIMLAQAIFIAIYTSLVTFNLLGRDYDAAVMVAGHCGVGLGQTPNAMANMEAIIEEKGP ADASMFIFPIVLAIAVNFTNPIVITFFINHFS >gi|229269865|gb|GG666046.1| GENE 51 73632 - 74783 1148 383 aa, chain + ## HITS:1 COG:MA2462 KEGG:ns NR:ns ## COG: MA2462 COG1215 # Protein_GI_number: 20091293 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Methanosarcina acetivorans str.C2A # 3 286 8 293 411 97 28.0 4e-20 MKILFYLSGFALFYAMIGYPLVLLILEKFIKRKNDQDYSYKPFVSVIISAYNEEDVIEKK LENIIKTQYPSYEVIIANDASNDRTVEICEKFIKENPAYNIRVNTVVNHLGKTNAQDEAV EVARGEIIVFSDANSMFKTDAIDELVSYFTADDIEYVCGSLIYMEDVDVSSAVAENTYWN FELKLRKIESNIKTIVNGNGAIYAVRKKDYRHIDLVNSHDYELPLYAGLNHKRALYNPKA IAVEKAGQTTADEFKRKVRMQRRILTNIFTNLRRLNIFEYGWFSFFHFGHKTLRYMQAFF HIVLFIANLGVLNDGIFYKLFFLGQVAFYTLAVIGQLSGAKSKVFYFPRYYCAMMLAQIL GGYKELKGGSKATWEKAETTRKL >gi|229269865|gb|GG666046.1| GENE 52 74807 - 75571 665 254 aa, chain + ## HITS:1 COG:no KEGG:Apre_0246 NR:ns ## KEGG: Apre_0246 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 250 10 259 259 310 62.0 3e-83 MNVEDINFYKKFNLECDALIINQAGKNAYEEVYDGGKKIRMITTDTRGLAVSRNLALLNS TADVVIFADDDEVFEEGYLERIKDGFIEHPDVDFFVFKTIVYQGGKEIIKVKEEKNLSFY NCLRYGSVHFVFRREVLARENLYLNTLFGSGTNIGSGEDSIFILSAIRKGLKVRTNKSLI AKVYNDNSNWFEGYNEKYFYDKGVLARALFPRLYKLYIGYFLYSHPEMLREIKKEKAKEK MYEGARDFGGYNGK >gi|229269865|gb|GG666046.1| GENE 53 75561 - 76511 1128 316 aa, chain + ## HITS:1 COG:no KEGG:Apre_0247 NR:ns ## KEGG: Apre_0247 # Name: not_defined # Def: lipopolysaccharide biosynthesis protein # Organism: A.prevotii # Pathway: not_defined # 1 316 1 312 312 166 36.0 2e-39 MENRKSKFTAFLSSIIAGVIVAMVVYFGLNIAGYKEYRASAKLVTTSVENLTETNPAEGY AATLNSKAIKERTLANLKIDWPVSKLDNKLSLTPIASSPIIEISVTDTNKLRAEDLADEY ADLSMTVINNIYNTGANVMEYAYKNANAVDNTLNYAIYAGLAGFVIYLVISLVSVSRHNH KLNKGGIKGKKKLEKKAKDQVKKNKDLIEENEEALVDKFDDEIDDKDYDLEDEFEQSYKD EEPFEEVKEGTRPLSPVDEVADEDFEATRKLDSKDIEMARKQDEQRAEEVNEEERDANKL EILGKLPKYQRGALDV >gi|229269865|gb|GG666046.1| GENE 54 76504 - 77160 815 218 aa, chain + ## HITS:1 COG:no KEGG:Apre_0248 NR:ns ## KEGG: Apre_0248 # Name: not_defined # Def: chromosome partitioning ATPase # Organism: A.prevotii # Pathway: not_defined # 4 216 3 217 219 181 47.0 2e-44 MFRRKKVDEKKEILLQAFYNLEDKLTRNLGVDDVVIAFTATDDMVMKMDSIYIMAGHLAE EDERILVIDANLRADELEEMKGFYNKRGFVDCLLGDFRLDDVIVRESDNLHLLMTGRVSE YEDMYLEPSAITNFFADCKDRYDYVFINTKENIGIAESNVFCGLADKTVIFSTEANLKSY LLEESKSQLEKAGADIKGVIISDYVYEDNELDDLFGGK >gi|229269865|gb|GG666046.1| GENE 55 77160 - 77564 706 134 aa, chain + ## HITS:1 COG:no KEGG:Apre_0249 NR:ns ## KEGG: Apre_0249 # Name: not_defined # Def: SH3 type 3 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 131 1 137 141 90 42.0 3e-17 MKKISAILALVLVFSLTSCMNDSYTSVRHPENVESESVEKTKENEAKKAENEDQKEEKTE EEVTDKVRDEISDGVEFRVEDTVNMRLAPSENSAVVSEVGPDDEILNLGETEGWTRVTVN GKTGYIRSDLLTKN >gi|229269865|gb|GG666046.1| GENE 56 77653 - 77973 187 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486162|ref|ZP_03916478.1| ## NR: gi|227486162|ref|ZP_03916478.1| hypothetical protein HMPREF0072_1565 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1565 [Anaerococcus lactolyticus ATCC 51172] # 1 106 1 106 106 93 100.0 5e-18 MIDIIKNMFMPIFTVVAVISLINFLVDGRKLSIYVSVVTGFIAAILLVVSVINPNSDLFM QLYLLLFLLSISLVILALQKQIDAFTWIGIALMVVMLYLLLRFPLI >gi|229269865|gb|GG666046.1| GENE 57 77987 - 79057 1216 356 aa, chain + ## HITS:1 COG:PH0022 KEGG:ns NR:ns ## COG: PH0022 COG3839 # Protein_GI_number: 14589983 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Pyrococcus horikoshii # 2 354 13 370 373 260 41.0 3e-69 MINIKNLKKIYDNGYEALKSVNLDIKDGALVTLLGPSGCGKSTILNIIAGILDPTDGDIE FDGESIVNKHPKDRDIGMVFQNYALYPHMTVLENIIFPLVVGEHKIKKEEAIKIAQKYMD LTYITDIQNKRPKEISGGQQQRVAIARALVKNPKTLLLDEPLSNLDARLRLSIREEIRNI VKTVGVTTIFVTHDQEEALSISDYIALMDKGVIQQYDIPQNLYLEPANLFVAKFIGNPII NIYDVENKGDVFANGDLLINKEKLIDSRKKSDLSGKTYQVGIRPEHFKLDPNGDLEIEVE SREMIGRYMILHFNLNGQASRMVVDSALAINPKDKVRVAVDHKAIYLFTEDGERVY >gi|229269865|gb|GG666046.1| GENE 58 79057 - 79941 758 294 aa, chain + ## HITS:1 COG:TM0596 KEGG:ns NR:ns ## COG: TM0596 COG1175 # Protein_GI_number: 15643362 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Thermotoga maritima # 34 291 155 414 420 154 37.0 2e-37 MKKKMTYRAESTNKAWLFLLPALFFILVFNVYPLFRTFYMAVHSNNILKPEFVGLANFPA VFHDKLFILAMKNTLIYSITVVPLSIIISMFIALILNEKIRGNKFFETIFFIPYLTSVIA VGIVFRYLFNGQYGFINHMLSFIGVGPIEFLNNPDYNMLAAIIFGVWNGLAFNIIVILAG LRGIDKDYYKIADTFGASGWEQFKKITLPQLTNIITFLFLTSFIASFKVYNQIFALFNGK AGVGNRLVTAVFYIYKKFYVEYRYGQAMAAAVILFLFLLVMTFVQRAIIRKIAR >gi|229269865|gb|GG666046.1| GENE 59 79945 - 80763 714 272 aa, chain + ## HITS:1 COG:CAC0428 KEGG:ns NR:ns ## COG: CAC0428 COG0395 # Protein_GI_number: 15893719 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Clostridium acetobutylicum # 14 272 15 273 273 175 35.0 7e-44 MKKIFKGLAFIFIILMAAVTLFPFLYMIASALMSFREVTSIPPKLLPASPQFVNFAEAMK AAPFERYFVNTVFVSLINTLGTLTTTVLAAFALNFMNFKGKNILQNFMLALLMVPFEIII FTNYSTIAKLGLLDTYAALIIPFMASVFYIFYLKEFLKSVPREFYNVAKVDGASDFEFIR KVMIPMCKQSLFTIGLLNFITGWNSFLWPILVTNTKDMRLISNGLSAFATEAGQLIHLQM AASTITVLPILILYFIFRKQILRGVSFGGIKG >gi|229269865|gb|GG666046.1| GENE 60 80862 - 82157 1951 431 aa, chain + ## HITS:1 COG:TM0595 KEGG:ns NR:ns ## COG: TM0595 COG1653 # Protein_GI_number: 15643361 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Thermotoga maritima # 50 381 18 364 419 176 32.0 8e-44 MKKKLTLLAALVLSIGMFSACGNKAKEEAPKEEAKVEEKAEEGKEKAKDGQTEVVFWHAM GGGQGEALESLVKDFEKENPDIKITLQHQGGYKDLNQILVATMQSPKDLPTITQAYPDWM LQFSEAGMVADLTERVKGENGIEDYDDIFQGVRDEIEQDGKIIGIPFNKSTEVLWYNQDI FDELGLKNPTNFEELKEVAKKIKAKKNIPAFGWDALSNFYVTYLKNKGIDFGPDLDVTCP ESIEAIKYYLDGIKEGYFRIAGTDQYLSGPFSNQQLAGYIGSNAGEVYVKEGVDGKFKYA AQAYPADKAVQQGTNIYMFDGASDEQKDAAFKFLKFVASKESQIKFALATGYMPARKSAV EDDSYKNADSVIPKILAPASEKLFSRPLVPGSQQAYNDIASKLEEILSNPNSDVEAEMKA FAPQFKADFEK >gi|229269865|gb|GG666046.1| GENE 61 82577 - 83326 863 249 aa, chain - ## HITS:1 COG:BH3725 KEGG:ns NR:ns ## COG: BH3725 COG1414 # Protein_GI_number: 15616287 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 8 249 2 249 251 95 27.0 8e-20 MSPKSDTIQSIINAGKIMDFINAKGQAGVREISKNLDIPKSTVFRILKSLEEIDYLLSTS DDEYAIGYKIHSLKPSLNKDTLLIKYSKDILKDFADLIGESINLAVNQKNKAYNIVYVDG EYYTLQANMPPESDLYCSSTGKIFLAYMDEASLKKYFNDELEKRTINTITRLDDFLKEKE EILKNDLSYDNEEYEYGLSCIATPIKKDGEVIAAMSISGPTTRLKFKNYDKLKEKLLEAK KKIEENIIY >gi|229269865|gb|GG666046.1| GENE 62 83429 - 84814 1239 461 aa, chain + ## HITS:1 COG:BH3947 KEGG:ns NR:ns ## COG: BH3947 COG3314 # Protein_GI_number: 15616509 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 21 460 18 459 460 193 29.0 5e-49 MYKKGRRPENKKGDCMTKNVGKSNIIKFILGTLFGVFFVLVPFNFDGKVDTVLFYYVKLF VSKFNNILTPLVVLCICFSALISLFNLFNNRTYFANDRLMKKLFVTSPFYVANRIIGAIL ALMIYFKVGPDFIISEDTGGSMLSLATQLSVVVPSMLLFQTFILEFGAMEFLGQFVGKIV KPLFKVSEICATSIISAWVGPGNAAIMGTSELFDQGYYTLREAAIISTQFTTGSIGWVVV VSSVLGVMDYFGSILLGLFVVSIIVAFISVRIKPVSSYADVYSESNKATRIKNDTAKQGS VIARATEEASNRASQVTSKNFISKIDNMTFYIFWLTPIIVFWGTAALILATHTPVISYVS LPIEWILSFMGVEESKVAASAIMSGIADNYLPVIIGESIQSVQTRVIVAMMSIISIIYLS ETATLLTSTKMVPRFIDVIIIFLERTFIALPFVVLFVKLIA >gi|229269865|gb|GG666046.1| GENE 63 84825 - 85802 939 325 aa, chain + ## HITS:1 COG:MTH970 KEGG:ns NR:ns ## COG: MTH970 COG0111 # Protein_GI_number: 15678988 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanothermobacter thermautotrophicus # 1 311 1 305 525 162 33.0 1e-39 MVKIVRLFEDNMNEVEEKTIKELGFCAEVLVRPSTTEEEVIENAKDADVIIAVYEPLTKK VLESLPNLKMVMYRSIGFNSIDLDFANEIKLPVGHCSQYCTQEVADWVLGSILMHNRRLY DFNNSVKIDKKWDCELFPSMRRLAEQKVGLIGFGSIPRLVTKRLAAFGADVLAYDPFVSD EDFEKLGVKKASLEEIFEKCDYISSHLPLNESTEKLIDKKLFSLVKEEAVFINSSRGGVV NEDDLYDALKEGKLSYAILDVLSTEQPDVYNNKLINLDKVFITPHIAFYSQDAFKQGAVD TINNIYKYFKGDYTKAELVNLKHIN >gi|229269865|gb|GG666046.1| GENE 64 85893 - 86075 171 60 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1694 NR:ns ## KEGG: MGAS10750_Spy1694 # Name: not_defined # Def: putative surface protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 57 620 676 783 88 89.0 1e-16 MKKKEEQQGKKQVKYEKEFAVFQVDKNFYNIIYKDGNTTAYMDVKTYVDQGRTMIPVLQF >gi|229269865|gb|GG666046.1| GENE 65 86727 - 88493 177 588 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 344 559 279 497 563 72 26 2e-11 MKNKLKALWLFAKITAKNDPLYIPVIILNALAPAAGTLINVFVPMIFINQITDPRPADQF IKIVVLLIIGKILLESLERLLNREEFVRRQGINDYLTFELAKKAMDLTYQNIENPHTLVL KEKANAAINMGAIHNLLSCLKDIITSVATMIGTALVIISFSPYLVGFSILISLLIILVNG KESSYTSKFNLEIVNVNRRFSYYFSLMASPHYQKEIRVFDLGEMLQSKTQGYLDQMMDGF EDKFGYEANMGAIKIFLESILRLVSYTYVAIRTLSAAYGPQISFGSFSAIIAANENFMKS FQTMFSELADFIMSLANLEPLYDFYILDSDFEENLEKASDFQSLEFKNVTFAYPGSDRKI IDNLSFRINKGEKISIVGVNNAGKTTIVKLLLRFFDIDSGEILYNGVNIKNISKKSLYEK ITGVFQDFAIMPFTIKENIIGDKEFRKNKTDEIIKQLDLCEKIKELPRGINTYLNKDIYE NATDLSLGQKQKLAIGRALYQNADFLILDEPTASLDPLAESKIYEHFNEMTEGKTAIFIS HRMSSSRFTDKILLLDGGKAAAFDSHENLMKSDNLYSKLYKAQAQYFE >gi|229269865|gb|GG666046.1| GENE 66 88483 - 90351 173 622 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 387 608 28 239 318 71 28 6e-11 MEKNLKNLKENLAQNLKDEEVIKSYLRADKLSNFDLLKMAYAPFKDNLKIKSSLILYPIT AGLIPIIEAFIMYYLVGLIEKNTDLRTMILTILAYALIIFICSMVSNQIERRTYSTYMGT RLSTFIKASGPIMEMDYGLGENSLFMAEFSRGFEPFSNNVTGLEGVYHDMYKLLANLISF VIISVIMAKLSPLIFILVIISILIQLGIRTYTDKYRHAHMGELNKVKRKTEAYYKEASDF RFAKDIRVFSFKDKFIEGFKPLVANVVKISRTFIKPEMYLSPILAVLLVGVEALCFYFLT GKILADQITLKNLTLIITSVAIYSSVISNLVINIAQTRSNLLYVSDGFDMLRVDLKSEEG SEKITGPMSIEFRNVSFSYPLSDKNVLENLSFTIRQKEKVAIVGVNGAGKSTIVSLILGL YKPTAGEIFINGTNANDLDLKERYAAFATVLQNVEPLAVSIAENVAATDENIDRDRVIDS LKKAGLGYKLDQLPKGIDTQMTRNIHDDGTLFSGGENQKLAIARALYKKDSGALIMDEPT AALDALAEEKIYRDLDEISKDKTLIFISHRLASTRFCDKIMLLNGGKITEYGTHDELLKQ DGLYKEMYESQRKYYLEENNEK >gi|229269865|gb|GG666046.1| GENE 67 90335 - 91534 1111 399 aa, chain - ## HITS:1 COG:no KEGG:Apre_1516 NR:ns ## KEGG: Apre_1516 # Name: not_defined # Def: transcriptional regulator, ArsR family # Organism: A.prevotii # Pathway: not_defined # 1 395 1 395 399 436 58.0 1e-121 MKTNFYNFKLIEHPLLVNEAGLMVYLYTNYLAAKNKNFFSFEDSYPGFNYSQDMNLTSID TAFYNNKAYIDFVRSVKKESLPYLEEFFHDQNEDILNLFYIFIENDGNYLPFMAGVFQNI NVSSIKEFSYEIFDLVFNLAFLRCIGVDIDDPELKSANLKEWSKKALKSDFLSLIASLPY GDKHSMALLRSFSNKKSIYDRLYPLLEKICQILENNFPKIQDEFTEHFEKIKKDGYKKVS EVIDQVGLASFLSKRDEPLNIYGLILAPNMIMIQFISEDYDDAFIKFGIYSNKDFVKKEN KLKHLSQYLKILGDPTRIDILDLLKERNYYAKELSDKLYITPATLSYHISQLHVCGFIGA YIEGRKTYYYLRKPGFEKVIEELTEFSKDIREEDYGKES >gi|229269865|gb|GG666046.1| GENE 68 91934 - 93094 1618 386 aa, chain + ## HITS:1 COG:NMA0365 KEGG:ns NR:ns ## COG: NMA0365 COG1457 # Protein_GI_number: 15793373 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Neisseria meningitidis Z2491 # 10 357 15 367 437 301 49.0 2e-81 MKKTSNFENGLIWFGAGVSIAEIITGTYFAPLGFKKGLLAMLIGHAIGAVLLYMAGLIGG KTEKSAMETVKMSFGQKGGLFFALLNVLQLVGWTAIMIYDGAISTSHVFSTGHIIWALVI GALVLVWIMVGISNLGKLNTVSMSLLFILTILLSFKVFQGVNFASKETADAMSFGLAIEL AVAMPLSWLPLISDYTREAEDPRGATLTSTVIYTLVSMWMYVIGMGMALLTKESDIAMIM VKSGLGLAAILIIILSTVTTTFLDAYSAGISAESLSKKINGQKIGIFVTIIGTIGAILFP MDDITDFLYLIGSVFAPMIAIQIADFFILHKDKSEADIYYKNMVIWLIGFIANRVFLKMD LLVGSTISCIIVVIIVKVLAEKLIKD >gi|229269865|gb|GG666046.1| GENE 69 93136 - 93702 561 188 aa, chain - ## HITS:1 COG:HI0977 KEGG:ns NR:ns ## COG: HI0977 COG2184 # Protein_GI_number: 16272915 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Haemophilus influenzae # 9 177 18 186 191 201 57.0 5e-52 MNRNEEYLSKKRAKELWDLGLINNFEVGTFKSLKDIHAYLFQDVFDFAGKIRTVNISKGN FRFAPLLFLESNLAIIEKMPETTFDEIVDKYVEMNIAHPFREGNGRATRIWLDLILKKNL GKCIDWDKIDKFAYLSAMERSVVNTLEIKHLLKSALTDEINNRDVFMKGIDKSYLYEDLY DISIEDIN >gi|229269865|gb|GG666046.1| GENE 70 93776 - 95029 837 417 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 16 416 13 416 418 327 43 6e-88 MKFTYEKEYDNVFDELVDRGYYEQATNEEELKKKLATESVKFYCGFDATADSLTVGHLIQ IMVMMRMQNYGHRPVALLGGGTTLIGDPSGRSDMRQVMTVERINHNAECFYKQFQRFLDF SDEGGAEMLNNKDWLLDLNFVGFLRDVGSEFLVNEMIKKDAYKNRMAAGGLTFFEFSYML LQSYDFLKMYRENGVTLEMGGSDQWSNIIGGVDLIKKHEQGDAYGMTFALLTTADGIKMG KSQKGAVWLDKEKTSPFEMFQYMRNVDDRDVEKFLLQLTFLPTAECRKLGQATEAAEINK AKEILAYEVVKLVHGKEEADAALDAAKALFSGKGDESAMPTTQISASDLPKGLLALMTEV GLTKSNGEARRTVQQGGVSINDEKITDPAFEVTEEIFEDNRIIIKKGKKNFHKVELA >gi|229269865|gb|GG666046.1| GENE 71 95412 - 96455 1105 347 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486178|ref|ZP_03916494.1| ## NR: gi|227486178|ref|ZP_03916494.1| hypothetical protein HMPREF0072_1581 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1581 [Anaerococcus lactolyticus ATCC 51172] # 1 347 1 347 347 657 100.0 0 MKKKFLAGALALIFLIPNASAFADEKDVAGSDDFKGDYTYEDGMYLPALYHFGVTKGRQV HPYGASKVGKISQKEKKAVLQRPKVKKLIKLYNKYYQNLIVWYKFGDKNMARWKEVKTMT DPVFGKFTKASWVDHYEKWAITLQNARDYFNSLGLADSDFTNEKTLKMIYKPELSFEKIE SCGAEDTIVFNQGISSAKLDAQSRELTDANGGKLVKKLVENLDGYELGEPTEVLGKSKSG AYDQRLFVEIYLTRDDSQILFQMAGKDEETWSDYSLKDKKISNFYGQEMLLSSYKEGGLY RAEFKDLDNEYLVESSGISEDEFLVILRSFIANIRNVSALSSMKLEF >gi|229269865|gb|GG666046.1| GENE 72 96944 - 98185 1761 413 aa, chain + ## HITS:1 COG:CAC0973 KEGG:ns NR:ns ## COG: CAC0973 COG0137 # Protein_GI_number: 15894260 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Clostridium acetobutylicum # 13 413 3 400 400 399 53.0 1e-111 MIKNEYEVLKEAKKVVLAYSGGLDTSVMVTWLMENGAKEVICVSVDLGQVKDPKAMEEKA IKSGAKKFYNINVEDEFVEEYDFKSLMAGAKYENVYLLGTAIARPLISKVLVDVANKEGA DLIVHGCTGKGNDQIRFELSIMAIAPDMKVIAPWRFWDIKGRSEEEAYAKDHGINLNFTK DEDYSMDENIWHLSHEGLDLEDPENPANLEKILHWVTPPEKAPDKAEIVEIEFKKGKPIG LNGEKLKGSDLVKKLNDLAGKHGIGIDDIVESRMVGMKSRGVYENPAASLLYFAHEKLET VTLHPDCLQYKQKMALDYAKLVYAGKWMTPLKEAMDAFIEKTQENVTGKVKVKLYKGAMQ PAGIYGANSLYLEEYATFEEDDVYNQSDATGFINLFGLSTKIYAKAMKEGEKK >gi|229269865|gb|GG666046.1| GENE 73 98186 - 99556 1348 456 aa, chain + ## HITS:1 COG:BH3186 KEGG:ns NR:ns ## COG: BH3186 COG0165 # Protein_GI_number: 15615748 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Bacillus halodurans # 2 452 3 453 458 448 51.0 1e-126 MKLWSGMLDGSLDKDAEIFNSSIKIDKRLVFDDITGSIAHVKMLGKQGIIGEDEADKIIK GLNKIEEKLKAKTLEIDMACEDIHTFVEGALISEIGEVGKKMHTARSRNDQVTTDLKLYI KKEGLEIINYLKIYSKSLTNLAKNHTETIMPGYTHLQAAQPVSFAHHLMAYAFMNLRDIS RMEACIKRLNELPLGACALAGTTYDIDRDFVANDLGFERVMGNSMDAVSDRDYVMDLASV LSIIAAHLSRLSEELIIWSSPAYKFIEIDDKFITGSSIMPQKKNPDMAELIRGKSARIIG NMNQAFVMMKALPLSYAKDMQEDKEFIFDSIDTIKISLKIMAGQIKSLSVNKEKMLEACK VGFLNATDLADYLVKKQVAFRDAHHIAARLVKYAIERNIALEDLDLETYKKESDLFQEDV YEAIDLKTCLKNRKSQGGPAPEEVLRQIAYVEGKIS >gi|229269865|gb|GG666046.1| GENE 74 99740 - 100129 493 129 aa, chain - ## HITS:1 COG:SPy0844 KEGG:ns NR:ns ## COG: SPy0844 COG3576 # Protein_GI_number: 15674878 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Streptococcus pyogenes M1 GAS # 3 125 2 126 133 116 54.0 1e-26 MKLTQEIKDLIGEQLAYMATVDENGNPNIGPKRTMRVLDDEHLIYCENTDGKHHANIKNN GKVAIAFVKREDNKGFRIVGTAKSYTDEEHMNLAKEKAGVMPKAAAVIIDIEKIYTLDSG PIAGKLLEA >gi|229269865|gb|GG666046.1| GENE 75 100375 - 102327 2445 650 aa, chain + ## HITS:1 COG:CAC2991_1 KEGG:ns NR:ns ## COG: CAC2991_1 COG0143 # Protein_GI_number: 15896243 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 536 1 533 536 578 51.0 1e-164 MTDRKPYYITTPIYYPNSNLHIGNTYTSIIADVLKRYKTLLGYEAYLVTGTDEHGQKIME SAHAHGKEPQEFVDKIAAETIKLWEKLDINYDTFIRSTGKQHEKDVVDIFNKLYEQGDIY KGEYKGYYCTPCETFWTESQLEDGKCPDCGRDVNYQEEETYFFRLSKYADKLKELFKDHP EFLEPAFRQKEMLNNFINKGLEDLSVTRTSFDWGVDVPFDNKHVVYVWIDALSCYLSAIG YGDDKEKFERYWPASVHLIGKDIVRFHTIIWPALLMALDLPLPEKVFAHGWILFENDKMS KSKGNIMYPEPLVELYGNDALKYFMLREFNFGSDGDFSSKKFMDRYNSDLVNDLGNLVSR TTSMISKYNGGVIEKGTEEGKFDDELIALAKETYTRFTDLMDSFKFNEALETIWKLIRRA NKYVDETEPWILGRDEANLPRLNRVLYNLAETLRIVAQLIEPTMKDTTKLILEKLGTDNK GFESAKEFGLLEEGAKVSKGKNLFDRLDVEEELVKLHEKNNALIHERLADKKEEEPAVEE EVKPEITYEDFTKLDLVVGKIIEANDHPNADKLLVFKVDIGSEVRTIVSGIKKWYKAEDL IGKNVIVVKNLAPRKMRGIESQGMLLAADFGEDLTMLSTLADIKPGSKVS >gi|229269865|gb|GG666046.1| GENE 76 102327 - 103082 804 251 aa, chain + ## HITS:1 COG:FN1343 KEGG:ns NR:ns ## COG: FN1343 COG0084 # Protein_GI_number: 19704678 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Fusobacterium nucleatum # 1 251 7 257 258 195 40.0 8e-50 MNLIDSHAHLTSEEFNEDRLFIIRDLSNFSIEAVINPGVNLANSRENVRLAKEFKNFYAQ VGIHPSDVEEMGENDLAEIEKLAKDAVAIGEIGLDYYWTTETKDLQKKVFIAQLDMARKL AKPVVIHNREATEDIMEILSNYKDLKVQIHCFSTDEETLKTFMDWGFYISIGGVVTYNTG LNEKQAAALVPIERLMLETDSPYLTPEPYRGLRNDPRKIIEVARKIAEIRGMKLSKVAKW TSKNAREFFDL >gi|229269865|gb|GG666046.1| GENE 77 103079 - 103609 654 176 aa, chain + ## HITS:1 COG:CAC2987 KEGG:ns NR:ns ## COG: CAC2987 COG1658 # Protein_GI_number: 15896239 # Func_class: L Replication, recombination and repair # Function: Small primase-like proteins (Toprim domain) # Organism: Clostridium acetobutylicum # 1 176 1 176 185 147 46.0 1e-35 MIKETIVVEGKDDIANVKRAVDCEMIATNGLAFGDNLIKRLEEINARCGIIILTDPDYAG KRIRARIARHIPTAKHAYIDRKKAIKKGDLGVENAEPEVIIDALKRAKAEETTRREEFSM ADLVGNGLSIGDGAREKRAKLGEILGIGYYNSKGLLAKLNSFGVSREEFERAVESL >gi|229269865|gb|GG666046.1| GENE 78 103606 - 104448 940 280 aa, chain + ## HITS:1 COG:BS_ksgA KEGG:ns NR:ns ## COG: BS_ksgA COG0030 # Protein_GI_number: 16077110 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Bacillus subtilis # 2 277 3 287 292 224 44.0 1e-58 MRKLYSPKVVKDIIDLYGFRFSKSLGQNFLIDKNFVDKIVEGADIAGKNVIEVGPGIGTI SYEMAKTCKKLVLIEIDSSLIPILEENMSDFDNVTIIHQDILKTDLKKIQDEYFGGEAFD FVSNLPYYITTPIIEKIFEEDLDCHSMTIMVQKEVADRMLATEKDKDYSSLSVFVKYYSE ARLLTKVPKSVFMPQPKIDSSVLRLDLRIYDEKVNKERLFALVKAGFLKRRKTILNSLSA VAEKDDLKKVFEILNLKENLRAENLSLDDYIKIVNELENC >gi|229269865|gb|GG666046.1| GENE 79 104434 - 104733 267 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486186|ref|ZP_03916502.1| ## NR: gi|227486186|ref|ZP_03916502.1| hypothetical protein HMPREF0072_1589 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1589 [Anaerococcus lactolyticus ATCC 51172] # 1 99 1 99 99 173 100.0 4e-42 MKNQNFSYKHLKNLLEIGHEIEFVYNGVFCSVNNWTDENNESAWFFSTNQKGEYTNTFLA EFDDRKTLLESLDIIKIKEKSLEEIIDKKLYDPSRLTIF >gi|229269865|gb|GG666046.1| GENE 80 104861 - 105088 403 75 aa, chain + ## HITS:1 COG:CAC2777 KEGG:ns NR:ns ## COG: CAC2777 COG0695 # Protein_GI_number: 15896032 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Clostridium acetobutylicum # 4 74 2 73 76 59 40.0 1e-09 MHDITIYTSNTCVFCKAAKQYFKENNIEYKERNIDEDKEAVNYLIEKGYRGVPVINIDGE DIVGFDKKVIEEKLK >gi|229269865|gb|GG666046.1| GENE 81 105134 - 107140 1955 668 aa, chain - ## HITS:1 COG:no KEGG:LAR_1001 NR:ns ## KEGG: LAR_1001 # Name: not_defined # Def: hypothetical protein # Organism: L.reuteri_K # Pathway: not_defined # 370 668 292 556 556 113 34.0 2e-23 MENISKVLVDLFKDDAEYIKENKINKEVIYAKAYSYDENFLRKILGENQLRSRFFKDLDG ISIFKITEFISFVGQSDLTIREKSLENGISYTFYEDKARLNKLKIKYKDNLLLKMSKDID YKFKTKFRVSYLKGDKITGKLRLGDVKLYKEEESFEDTRKIANLKYKSYNLLKEDFKESS GLISVDYGEIKKLKTYITVFSSPSYYLNMLKALGKENTRQVLTDLNDLILKDSDYFENKN MGYHTIIKDSLLREFDGFNLSFLKIANVLNDFKMTDKIFEIFALINKKLKKYPDLNIIYE FIAQALEALGNLDFNGEAKSKNFYKSYLTSLEYEFRDSLNIFEKLNNFYRILPQDEDNLR RYEEAISYDIDRIVELLTVKPSDYEKLKDAENRISIGHYTSLDILGYLIDGDIEEIDQIY RNKLRLTNARMMNDPMEGKAVFEYLNDGNEDYINLNNYGNNKIYLLSASNMADSLPMWKQ YADDTKGVFLEFSKEFIKSIINDKKIKLVKVFYIGDKAINYNQKSDEINGLLKKLKVDYK AYLEKISETLNKDSTNKSQLLRSFNNEIFLKLDKISYYFKKDSYAYEGEYRIVVDLDEDE SRDHFKEIKYHNPNFPLPFLGTYLTDYELRYQRLIFGPKAIDKDYLVPYIKYCLGKDIET VNSKIKYR >gi|229269865|gb|GG666046.1| GENE 82 107206 - 108048 948 280 aa, chain - ## HITS:1 COG:no KEGG:Apre_1507 NR:ns ## KEGG: Apre_1507 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 279 4 275 279 268 52.0 2e-70 MRYIDKKKFYIGSLLIGLSVLALCFIFRYSYINFLGFDRPLKLACILCAILGTLGAILAI VDGVNKNFRNGILLIGILNLIMALAYPILLTTEKALEPTKNPYETTTPDKGYSTKFKRDA SFIIEGELYKFPLSLKDFTKHGFTYDLKEKDNHIVATISRVGDSFDPKPTWFTDGINNEV YREFYLLEAIYDLSEDKEKIENAPIKELTASVINNNRDFEIMGIKLEDSIYDIKKAFPKE LIEDKNNKTASIKIYYLKTSDGHTVRLNAHNGTVQSIDIY >gi|229269865|gb|GG666046.1| GENE 83 108195 - 109379 1338 394 aa, chain + ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 4 393 7 396 404 358 53.0 1e-98 MFDFKKAKERVDEVINPTHLIYSEVFSDSSNNNVYIKPENLQKTGSFKLRGAYNKLSKLD KESADKGIITASAGNHAQGVAFSAQKLGMKAVICMPEHTPMIKVDGTLKYGAEVVLHGAS FDECKDHALKLAEEKGYTFIPPFDDLDVIEGQGTIGLEIVEELKYVDYVLVPVGGGGLIS GVAKCLKQISPLIKVIGVEPYSARSMKEAVKLGHIVTLEGVDTIADGTAVATVGKLNYEI CKDNVDDWITVTDEEILMAFIKLIEKHKLIAEPSGILPLAALDKLNFFNKNVVCVVSGGN IDMSFISQLIDRGLYETGRITRIEVELPNIPGKLQALLTEIAETKANVISIEHDGFKEAS RFKNINVELTLETNGKDHANKIREVIAKKGYIIH >gi|229269865|gb|GG666046.1| GENE 84 109376 - 110806 1557 476 aa, chain + ## HITS:1 COG:CAC2129 KEGG:ns NR:ns ## COG: CAC2129 COG0769 # Protein_GI_number: 15895398 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Clostridium acetobutylicum # 2 476 1 481 482 254 31.0 4e-67 MIKLSDLVRKIEYLDVKHGADFKVRAVTNNSLKVGEGFIFVAVKGSIFDGHKYIDEAIKK GAKAVVHTEDVEYREDITYIRVFDPRQTLAEISNLITDFPSEKLSVIGVTGTNGKTTTSK LIAYLIEKVFGPCANIGTDGANVGGEIIETSNTTPDITEINRILEKCVEKGIKYVTLEAS SHGLVQKRLAGVRFKVGIFNNLSTEHLDYHKTMDAYFKAKMILFENSEITIANIDDPWGK KAVELFPTTLSFGKDEKANIRATDISKTDKGISFKIDGVDFFIRTIADFELNNYLAAIST LKSLGASLTELSEVITDFPGVGSRFEYIENDKGLNIIVDFAHTPRAFEEIFKSLPRDKKK IAVFGIQGDRNPEFRNLIGKTVSDYGIYAIVTTDDPKFDTYENISKDIVAGMAENYGAYT LIKDRKEAIEAGLRMAKPGDYVLFMGKGEENFIKLHGNEKTPWNEKATIRETLEKI >gi|229269865|gb|GG666046.1| GENE 85 110803 - 112026 1096 407 aa, chain + ## HITS:1 COG:CAC3590 KEGG:ns NR:ns ## COG: CAC3590 COG2081 # Protein_GI_number: 15896824 # Func_class: R General function prediction only # Function: Predicted flavoproteins # Organism: Clostridium acetobutylicum # 1 387 1 398 405 206 32.0 9e-53 MKTVLIGGGVAGLFFANLYDGDLIIVEKNEVAGRKLLATGNGRCNFTNLNLSLDKFNSSG KDFYKAALKKYDNFDLINFLNDLGILTTSFPSGRCYPQTLSAKTIRDILYLNAKAKFIFE SEVKGIDFKNHLVITDKSKIYYDNLVIASGGISLPGSGSDGKMLDILRPFHKVTRLSYGI TNYKTANPLSKKAKGVRVSARARLFVDGKFIEESTDDVIFQAYGLTGTAILDLSNHISYA LLDKKEVWVSLDLLEAYPEEKLARIIKNLERRNPNKTIEEILMGFLHAKLIIDVLNRVKL KSKMKVGDMSDEMIANLIMTIKDLKFKVTTINDEENAQVTIGGIDTDFVDPNTFESKIIT HLYFIGEVLDVDGACGGYNIQWAYSSAKACAEGLLAKNREEINVKNK >gi|229269865|gb|GG666046.1| GENE 86 112010 - 113302 1623 430 aa, chain + ## HITS:1 COG:BH0774 KEGG:ns NR:ns ## COG: BH0774 COG4091 # Protein_GI_number: 15613337 # Func_class: E Amino acid transport and metabolism # Function: Predicted homoserine dehydrogenase # Organism: Bacillus halodurans # 1 426 1 426 439 335 42.0 7e-92 MLKINRKLREMRDNGESIKLAIIGCGKMGGSLISQLSKLDAMEVKLVVDRNPRKAIKALT QAGISEDKIIYTDDYNEGYEVLEKGYVAVSTNYRLSYKLLQINAVVDCTGNPPFGAVIAR KTIQYHKHMISFNVECEATVGPVLHDMAKKAGVVYTGILGDEPGAIMELVDNAYGMGLEV LVAAKGKNNPLNNYATNEELEAEANSKKLSPRMLTSFVDGTNTMIELNSVCNAIGFLPDT FGCHGITTSPDKVVEDFKLKRDGGILNSYGVVDFSPGMAPGVFIIVTSDQEDVRDLMKFL GFGDGPNYLLYRPYHLTSLEAPITIFNAVVENEPTIAPIHGQVADTVTIAKRDIKKGEKL DGIGSNKVFGKLTSHARSLEEDLLPIGLITPKTEAIVDIPKDTVIDMSMVKIDEKATITR LRRRQNSMKL >gi|229269865|gb|GG666046.1| GENE 87 113430 - 114380 385 316 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 5 314 1 306 311 152 32 1e-35 MGGLMESLIEVRGLVKKYKDLTAVDGLDLDVKKGRILGLLGPNGSGKSTTINCMLSLLKK DAGSVKIYGKEMSPDAYDIKKKIGVVFQDVGVYDELSVYENIDYFCGLYIRDKKEREKLI QRTLDLVGLNDFVKFKPKKLSGGLLRRLNIACGIAHRPDIIILDEPTVAVDPQSRNNILE GIKKLNEEGSTIIYTSHYMDEVDFLCDDIVIIDKGKVIAKGTSNELKDMIQIGEKISFEA NDLTDEVKEKLRNMDHIIDFAYKDETCKMTFSKGEENLINLVNILASFKVTYRSINVEKP SLNDVFLDLTGKDLRD >gi|229269865|gb|GG666046.1| GENE 88 114436 - 115479 852 347 aa, chain + ## HITS:1 COG:no KEGG:FMG_0240 NR:ns ## KEGG: FMG_0240 # Name: not_defined # Def: antibiotic ABC transporter permease # Organism: F.magna # Pathway: ABC transporters [PATH:fma02010] # 1 347 19 365 365 436 66.0 1e-121 MVFWALVFPIILGMFFKLAFGGISDNNKFDPIDIGVSELAFKDQNFKNFLETMEDEDYFR ITKAKDEGILNTNPDVRAYIKSKDKIITKKSGIQETIVETIINTYVQKSEMIKKAMEKNP HTDISKLLNVENHIKDESRKNMDPINAFFYTLIGMTTIYGYMWGLYVIYQYEANLSVNAK RNAVAPIKKSVSLLASVLVSWLINFIITMVFIFYLDRALGVDFGDRKPLLILLCLVSSLT GVAFGIFIGVSNKKNIEFKINLGIAITMLMSFLSGMMISSMKVIVQENFPILGKINPVAV VTDAIYSLYYYDSTSRFYENLGLLMLISAVFLVGSLFFMRGKEYESL >gi|229269865|gb|GG666046.1| GENE 89 115466 - 116575 1077 369 aa, chain + ## HITS:1 COG:CAC0243 KEGG:ns NR:ns ## COG: CAC0243 COG0842 # Protein_GI_number: 15893535 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, permease component # Organism: Clostridium acetobutylicum # 52 366 48 369 370 62 21.0 2e-09 MRVFKNYFKIAMAHKVAIILYTLIFLAILSFSTKSDKNAFYTNVRPNIYLKDEAKTDLSK GLYDYLDKKAVIKKMDEDLVEDKLFYQIISASLVIPKDFDQTRKVNFKQAPDDMYGMAVK EHVNQYLSQVDAYEKVGFATNEAIKYTNKDLAKQVDVKIKSKIDLAKEDNSVFYFNFINY LILAQVLLIVSTIVSVYKKKSLAMRNAVSPMPRARMNLELILGHISTGLIVWALYILLFV ILYKYDFSAAHINLMMVNSLVFTISVVTMAVFISSLISNENTIQGVMQVVSLGSSFLCGA FVPQALLSKTALTLGKIFPSYYYIKNNEMVLENPSFGTILPNIGIMLAFSLVFILISMGM KTKVKDKIS >gi|229269865|gb|GG666046.1| GENE 90 116645 - 117382 578 245 aa, chain + ## HITS:1 COG:DR0779_2 KEGG:ns NR:ns ## COG: DR0779_2 COG2819 # Protein_GI_number: 15805805 # Func_class: R General function prediction only # Function: Predicted hydrolase of the alpha/beta superfamily # Organism: Deinococcus radiodurans # 30 243 30 249 255 81 31.0 1e-15 MVEKKELYSKYLEREVTYTFIEDRGSDIFLYFFDGANLYDKKESFMGEIWALDKAVEKIG LRANLVGIYCAEGEEGRARTNEYSPFKNFANKETNAKLNPKGILTGKFIVEELLPLVEKN KKTSSRLIGGSSMGGIMSLYMGSAYPEYFDKVLAMSTHFILEPVGMGEFLAKYDSKNNQK IYLDTGTKEFDDEITQKSYVSLSKMAYGFLKDKLDIKYVVDQGAIHNEKYWQKRLPDALK FLLFT >gi|229269865|gb|GG666046.1| GENE 91 117687 - 118394 466 235 aa, chain - ## HITS:1 COG:BH0419 KEGG:ns NR:ns ## COG: BH0419 COG2188 # Protein_GI_number: 15612982 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 4 196 9 199 240 117 37.0 3e-26 MSKPKYKIIEDYIENQINKNLLKAGDQINTEEELIKKFGFSRMTINKAINNLANRNLIYR KPGIGSFVKHRPIKKEINNLSISFTEDMTNNGLVASSKLLAYCLIKAKKNENVKKILELD DNDNIHYFKRLRFGNGSPIAISESYISAKNISDFNLSALDSSLYDYLHSLGFEIVDSQME FSAAIPNKEQEYLLKLDNTALFVSKTIMTANYNNIEEKTEYTVTYYNGDIYSYKI >gi|229269865|gb|GG666046.1| GENE 92 118796 - 119278 523 160 aa, chain + ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 3 153 2 150 153 98 33.0 5e-21 MTIALMRVDNRLLHGQVAISWSNHLGINTILIANDEVKNDKTKAMIYDLAKPANTRLYVR GLEESCDIVEKFKDSQKSHVLVIVSNIKDAYYLANESKGSIQHINVGGLNKVDNKEKLSE NVYLDQYEIEMIKELKSKNIKVEFRMLPHDNEKSLEDFSK >gi|229269865|gb|GG666046.1| GENE 93 119287 - 120069 872 260 aa, chain + ## HITS:1 COG:STM0575 KEGG:ns NR:ns ## COG: STM0575 COG3715 # Protein_GI_number: 16763952 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 1 244 1 245 247 211 51.0 1e-54 MFIQALLIGIVSGIGILDGRILGQLMLDRPLVLGALVGLILGDLKSGIIIGAQLELIWMG VAGIGAATPPDIVTGGVLGTAFAIISGKGAEIALAVAVPISVLAQSLGVLVRIINAYYSH KADRYAIERNYKGLALCMWIPAFLFFLSTFLPTFLAMLLGAEHVSAFINSIPKVVLDGLS VAGKLLPAIGFALLMDMLWSKKVAPFFFVGFLLASYFNVNITGIALIIAAIAMIIEFYIK DDKQAVVVSDNLVEGDIDFE >gi|229269865|gb|GG666046.1| GENE 94 120062 - 120865 529 267 aa, chain + ## HITS:1 COG:STM0574 KEGG:ns NR:ns ## COG: STM0574 COG3716 # Protein_GI_number: 16763951 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Salmonella typhimurium LT2 # 3 244 20 260 284 287 57.0 1e-77 MNNKVNKKDLNKVFWRSFALQGAFNYERMQNIGYMYSMLPVIKRVYKDNDVEETRAIQRH LEIFNTTPAVSPFIMGVSAAMEQENSINSDFNEESINAVKASLMGPLAGIGDSIFWGTLR VIAAGIGISFASQGNIVGPLIFLLLYNIPHILVRVFGLKFGFDLGVNSLEKIHKNGVMDK LMSVASIIGLTVVGAMVATMLDINTPLSWNISGADVVVQDILDQILPNLLALVVTFLTFK SIKKHSVAKITVFMLIGGMILHFIGII >gi|229269865|gb|GG666046.1| GENE 95 120876 - 121913 832 345 aa, chain + ## HITS:1 COG:STM0573 KEGG:ns NR:ns ## COG: STM0573 COG0449 # Protein_GI_number: 16763950 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Salmonella typhimurium LT2 # 7 343 1 345 347 229 37.0 4e-60 MKIIEYIKETPKYLNHIIDQSESTFESVAELDFDELYITGSGTSFNAALDVKYYIQKILN KKVVVLNTFDIDDLKFGDEKKILIGISQSGSSYSTLQALKIANKMGITTASMTGEETSII DDEASYNYQIKCGEEKAGAKTKGYFCTKLNLILFALIYGKTHDIIGEDVFDGEVNNLRED FEKIEINIENSLNWVELNKDKFKEIKEIKVVSAYNQYGDVEESALKLLEAMRIPVSGYEM EQFIHGIYNSTNSETNVFILDDGSEERFDNLKKVLQQWTEQVYIISEKENADFKIINSKN SSSKHFSYIIPIWVICAEIPELKGINPEIPLDPKFHIKMNSKKLS >gi|229269865|gb|GG666046.1| GENE 96 122103 - 122642 658 179 aa, chain - ## HITS:1 COG:SA0826 KEGG:ns NR:ns ## COG: SA0826 COG0681 # Protein_GI_number: 15926554 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Staphylococcus aureus N315 # 11 177 3 182 191 108 36.0 4e-24 MTESKIKKILKEILDWVKTIAIALLITFFIKFFIIDLTRISGHSMENTLFTDDLVVVEKI SRNITHKYKRGDVIIFHSPTENKLYVKRIIGMPGDQVDLKDGMFYINGDELDEPYYTTGD FTESKGENQWFLGYDEYFMVGDNRPKSNDSRKFGPVHETNFLGRAIYRVYPFDEMKNLN >gi|229269865|gb|GG666046.1| GENE 97 122839 - 124020 1784 393 aa, chain - ## HITS:1 COG:aq_206_1 KEGG:ns NR:ns ## COG: aq_206_1 COG1251 # Protein_GI_number: 15605766 # Func_class: C Energy production and conversion # Function: NAD(P)H-nitrite reductase # Organism: Aquifex aeolicus # 5 385 4 390 470 215 35.0 1e-55 MYDYLIIGNGICGLSAAEEIRKNDDKGSILILTDENGHTYWRTRLSELIAKDYTDEEILV KKETWYGERKIEVKLNTHAEKIDKENKKVISKDGEEFEYGKLLIATGSRAFVPPIKNADA KGVFAIRSSEDLKNFKAYLANKKKLIIIGGGILGLEAANSISQLGIEITIVEAFDYLLAR QLDKDLSQKLEKALNDMGMKTLTGKFSEEILVKDGAVCGLKLTDGTELEADAIMIQAGIR ANIDIAKNSGLATDRGILVGENLQVENEDIYAAGDVAQIGNFSIGLWTASMEMGKIAGAN MTGDNKLYEKPKPFSTLMLGDIKLFSAGQNAGDGIEEVKKEDGEKIYKLFKNSDKFVGGI LWGDIKYQMDVKKIVFEGIDPKETKLGGEIFGL >gi|229269865|gb|GG666046.1| GENE 98 124120 - 124620 428 166 aa, chain + ## HITS:1 COG:SP1464 KEGG:ns NR:ns ## COG: SP1464 COG0454 # Protein_GI_number: 15901314 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 165 3 162 164 80 32.0 1e-15 MRKAGIKDIKKIEKIIDKAKKSLKKDGIDQWQIESMNEKFLLGQIETGKAYVFGNEEEIL AYCFLSDEKEEAYKVWEGDFEGKNPLTIHTFAVDTAATQRGIATKFFIAIIRHAEKNSFD ALRIDTHEDNFKMRGLINKLGFRKIGQIFIDEEGVKKPRICYERLL >gi|229269865|gb|GG666046.1| GENE 99 124617 - 127178 2059 853 aa, chain + ## HITS:1 COG:FN0524 KEGG:ns NR:ns ## COG: FN0524 COG0210 # Protein_GI_number: 19703859 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Fusobacterium nucleatum # 2 850 4 915 919 261 28.0 3e-69 MINESQRIIIEKARTPAAVIAGPGTGKTYTIVKKVISLIKNEGISPNRILLTTFTKKAAS ELQTRIISEFKAEGIKTELKDMMIGNFHSLALDFLEKYPSLNRPFLDSKVIDQVLEGYLI EKNLARYKNIEDYEKYITYNHSWSIKGIYEEITNKLMDVDKLLKSENPREVFAGKIFKTH ERLLKENNLINFQMILRDFYLLLKDPVRGEEIRKGIDFVIVDEYQDTNYIQQEIAFNLVR DKEIMVFGDDDQSLYSFRGADPRNLTEFSDNFFKKKGHKAYTYKLDINYRSNQAIIEKSL KWLDNKDYAGENKKTLRSVDKEKNPNTIVRARANELKNLATIIRILKQDINLGQIAFLFP SLNHAYVSKLQAYFEKAGIRVLNKKSSEFFRRDEIRGFIYLIMNLAEIKTFYEDPSTIYG AFAKNKAKYKNYLYYLTRDEIFKEDKEIQNFIASEKENNLPLTSLFYKAMGLEYFRKFLI MDEEDLDGARVLGNISTMINLAKDFDEIFKNENPKDHYKEFINSYLEYLFVSRAIEEYAN IDSHKDAVNFMTIHQAKGLEFEVVFISGLFDSPKPAKPGFLEKPDPNDFSYVKDFYRKYY TGFTRAKNLLVLLDNSEDYKLSKFSESFPRTSLLKSLAFERSEEKKEKKVLAYTTDIEVF KTCSLKYRFVRKLNFRSLNTRALSFGTNTHKLAEYYALLPKDKAKLLDFLENNPEYQEPI ENFIKRDFKITGVETNYKLDRNFYILQGKVDISLEDGSILDIKTGSYNEDFISAYKGQLM TYRHLILGNHHPLNKMYLYFIEEDRLIEIEVTDFDINEIDKIARMIDRNIGYRRTDDVEA CKFCQMKYFCKRN >gi|229269865|gb|GG666046.1| GENE 100 127219 - 127545 187 108 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|42783874|ref|NP_981121.1| 30S ribosomal protein S14 homolog-related [Bacillus cereus ATCC 10987] # 5 106 10 110 114 76 40 1e-12 MIDTQMLKGLIDGIILHIIKNKETYGYEIIEELKLNGFYNMTEGTVYPILTRLIKKGLIL GIFKESTKGPKRKYYYITDKGRDYLKGFYKSYESLKAAMDNVLEKGNK >gi|229269865|gb|GG666046.1| GENE 101 127542 - 128240 981 232 aa, chain + ## HITS:1 COG:BH3273 KEGG:ns NR:ns ## COG: BH3273 COG1187 # Protein_GI_number: 15615835 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Bacillus halodurans # 1 230 1 233 238 179 43.0 5e-45 MRVDKMIGNTGLDTRKNIKRNAKKGALVINGEIVKDSSVKVDPLVDEVFYMGHFVEYIEN LYLILNKPSGVLSATQDAEETVIDLLDDFYKNYDLSIAGRLDKDTTGLIILSTDGKFIHK ITSPNSHITKTYEVKTRDPIAENLKEEFKKGVYIKEDDYTARPAELTITGEKEAIVKVTE GKYHLVKRLFSNLGNEVVGLKRTAIGKLVLDPYLKEGDYRELTEAELELFDF >gi|229269865|gb|GG666046.1| GENE 102 128346 - 128936 560 196 aa, chain + ## HITS:1 COG:ygcP KEGG:ns NR:ns ## COG: ygcP COG1954 # Protein_GI_number: 16130675 # Func_class: K Transcription # Function: Glycerol-3-phosphate responsive antiterminator (mRNA-binding) # Organism: Escherichia coli K12 # 13 196 6 186 191 152 41.0 5e-37 MRFGRDMLNIREILYENPVIMAIKDGKDLRECLKEEYIDNKVVFVLFGNIETIPTIVKKL KNKDKIVFVHENLVEGLSSSHYSPNFIKKYTDADGIITTRAQNIYEARRLGLSTVFRFFI LDSLSYESIKETIKSTSADLFEVLPGIMPQIIGEIASWSQVPLIAGGLIRDKADAMGAIG AGAIGVSSSNTKIWKM >gi|229269865|gb|GG666046.1| GENE 103 128946 - 130451 1722 501 aa, chain + ## HITS:1 COG:HI0691 KEGG:ns NR:ns ## COG: HI0691 COG0554 # Protein_GI_number: 16272633 # Func_class: C Energy production and conversion # Function: Glycerol kinase # Organism: Haemophilus influenzae # 3 501 5 503 503 654 62.0 0 MTKYIMALDAGTTSNRAIIFNKKGEIMSVAQKEFTQFFPHPGWVEHDATEIWSTQLGVCT EAMAKLGLTACDIEAIGITNQRETTIVWEKATGKPVYNAIVWQCRRTADMADKLVADGHR GLIQDKTGLVVDPYFSATKIRWILDNIENGQERAENGELLFGTVDTWLVYNLTRGKVHVT DYSNASRTMIFNIHTLEWDDELLAMLNIPKCMLPDVKPSSYVYGTTFPGYFDGEIKIAGI AGDQQAALFGQTCFEKGDAKNTYGTGAFLLMNTGKEAVKSENGLVTTIAWGLEEGKVDYA LEGSIFVAGSAIQWLRDQLRIVDAADDTEYMATKVNDTNGCYVVPAFTGLGAPYWDPYAR GSIVGLTRGTNKYHIVRATLESLAYLTNDVLASMERDAGHPLHELKVDGGASANNFLMQF QADMIQSKVERPKTLETTALGASYLAGLATGFYKDKDEIKAYRLVDKTFEPSISRDERDK KDRNWQRAIARSFDWAKHYEE >gi|229269865|gb|GG666046.1| GENE 104 130569 - 131990 1733 473 aa, chain + ## HITS:1 COG:FN0183 KEGG:ns NR:ns ## COG: FN0183 COG0579 # Protein_GI_number: 19703528 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Fusobacterium nucleatum # 1 473 23 498 498 397 45.0 1e-110 MFDVIIIGGGVIGASVAAHLSKKKGRFLLLEKNEDVCTETSKANSGICHGGYDAEPGSLK AKFNVEGNHMMDEESKLFAFPYKKIGTLVLCHDEKDMPNLQKLYDYGIANGVTGMKILNR EETLALEKNITDDVVASLYCAEAGILDPFLMTIAYAEVSNINGVDYKFNTKVEKIEKKDD HWILHTNDGDFETKAVINCAGVYSDELHNQISDKKYEIKARRGEYLLLDKETAGFVNHVM FNLPSDKGKGILVSPTIDNNTLVGPTSDFVDDKNDRRSTRERLEEVVEKSNHTVKNVPVR MVITSFSGNRAHEVGGDFILEESKDGFFDCVGIESPGLTSSPAIGKYMAELVADKYDFAD NKEFTYDRHPIPKTSEMSLEEHSALIKKNKLYGKIICRCESVTEGEIVDAINRPLGARTV DGIKRRVRASAGRCQGGFCLPHLMEILARELGEDMSEVVKNSKDSYYVDGRVK >gi|229269865|gb|GG666046.1| GENE 105 132000 - 133022 1397 340 aa, chain + ## HITS:1 COG:CAC1323 KEGG:ns NR:ns ## COG: CAC1323 COG0446 # Protein_GI_number: 15894603 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Clostridium acetobutylicum # 3 309 2 308 417 392 64.0 1e-109 MKNYDLVVVGGGPAGLAAAAKAYDCGIKNVLIVERDKKLGGILNQCIHNGFGLHRFKEEL TGPEYAGRFEDEVAKRDIDVMLNTIVVDFSSDKTLTLMNEENGMFQIRPKAVILAMGCRE RPRGALNIPGSRPAGVYSAGTAQKLVNIDGFMPGKKIVILGSGDIGLIMARRMTLEGAEV KCVAEIMPYSGGLKRNIVQCLNDFDIPLYFSTTISDIEGTDRVKGVYLSKVDENMKVIPG TEKYVECDAILLSVGLIPENELSRDAQIKMDPRTKGAEVSDRMMTSIDGVFAAGNVLHVH DLVDYVTEKVNLLEKMPQPISKMNLIRKMKRKSTSHQAMA >gi|229269865|gb|GG666046.1| GENE 106 133058 - 133258 212 66 aa, chain + ## HITS:1 COG:no KEGG:Apre_1489 NR:ns ## KEGG: Apre_1489 # Name: not_defined # Def: FAD-dependent pyridine nucleotide-disulfide oxidoreductase # Organism: A.prevotii # Pathway: not_defined # 1 66 354 419 419 85 60.0 5e-16 MRDEVVIRFRVNNIYQKSRLVLEVDGKEVAQKRKIVFAPGEMEDLVLKKSDLNENSEKIE VRLESL >gi|229269865|gb|GG666046.1| GENE 107 133255 - 133611 511 118 aa, chain + ## HITS:1 COG:CAC1324 KEGG:ns NR:ns ## COG: CAC1324 COG3862 # Protein_GI_number: 15894604 # Func_class: S Function unknown # Function: Uncharacterized protein with conserved CXXC pairs # Organism: Clostridium acetobutylicum # 4 118 4 115 117 98 52.0 2e-21 MIKELTCINCPLGCTVSVTVEDGQITNITGNTCKRGEIYAKNELTNPVRTVTSTARVDGA KEYLVSVKTEQAIPKGKIMEVMKEINKAHISAPVKIGDCLIENVAGTGVRVIATSKAS >gi|229269865|gb|GG666046.1| GENE 108 133697 - 135169 1493 490 aa, chain - ## HITS:1 COG:CAC1322 KEGG:ns NR:ns ## COG: CAC1322 COG0579 # Protein_GI_number: 15894602 # Func_class: R General function prediction only # Function: Predicted dehydrogenase # Organism: Clostridium acetobutylicum # 1 473 1 469 475 360 43.0 3e-99 MYDLIIIGAGVTGASIARNLSRYKLNILVLEKENDVSMGASKANSAIIHGGYAEPHSELR GRICYEGRREFKKLNEELNFGFLENGSLVLAFDKEDEKELQKLLAMGLENGLDDLEIINQ ARLREIEPKVSDKATSALYCKGAGVCSPYEYVIALMENAVSNGVELKLESKVTNIEKNGT IFTLTTEDGNTFEGKYIINASGLEGAKISEMITETNFSIHPRSGEYLLMQKGSGARINHV LFQTPSPKSKGILVTRTYHNNLLLGPDAIDEEVIDKGTHIERLAEIYRLAQKSVKDDVIN LKEFIRSFAGLRPASSTGDFIIENTKTNGFINVVGIQSPGITSSPAIAKMVEDILRNLGL NLIDDPSYNPHRKPIIEYKDLEDFNKVIKKVDLPLGNPERLVCRCEQVSEKTIRDAMNRG LACNSFDSIKRRTRAGMGFCQGTFCRKRVIEVMEDEVGSKIKSDLFDSEHSGISRINKAD INKFIKEISD >gi|229269865|gb|GG666046.1| GENE 109 135461 - 137746 2470 761 aa, chain + ## HITS:1 COG:no KEGG:Cthe_2357 NR:ns ## KEGG: Cthe_2357 # Name: not_defined # Def: hypothetical protein # Organism: C.thermocellum # Pathway: not_defined # 286 653 9 370 390 73 22.0 3e-11 MRCEHCGASIDQASNFCPVCGSKIENKGPAEEAIEKNTSPKKSLSDLLNFKLIKNKIDPK DHANSNESVGGEAKENKASKDGGLDNSDLNQNLKPSNNSDENQTKEENPEEDLFSLDPQD RMDKESRRFKNLGEKSSPYNQRSVIEEVQAKVSLNQARKNGDEDYYIDDYKETILNKNLE EKLDRLIGDGEDDLANMTISAGIRKIQARNKKISRENFIKDNGDQILRNANPKQRTPAVR EADKKADDTESSQEKVQANPLNDFQKKYLTSRNLLLGLIGVLIAVILGTLYVKMNKTTDI TIPLSDYITISYEGENGSAVPKASIDTDKLIQAYGKDIKYNSRNNNKDSYESPAQEFAAD LKDNVVFQYSKDSGLSNGDEITVMANLDNIKISDKYNVLITNASKAVIIDGISSDDFTDP FKYINVKFEGESPNMTLTASLTDDAPEFMHAVDIIPAKTNGIKEGEDIAVSLNFNEEEFK NNYNVSLSPTSKNFTAKTGDGDSTSEGDSEYIKTTAHLNSDLLGQLKYNAGKLIKQTILY KNIINVDNIEYLGSFTGFKDDGSGDVKNKVYLIYEVTTSEKLPETNFQSSFKYYTFVEYQ NVKKAMDADGKFYSQGPVTTDNQIFHKFFVESDYKYYQIEYQGFGFIDKALANVGSGLEG LTMTEDNKTNIKDHFATSDGVVGEYEADGRRLSLRADGSLTYQTDKAVHLGSYSANGNEV SATIKGVNVDTPIILKFEGGSLKAESQGEFDSISFNKIENF >gi|229269865|gb|GG666046.1| GENE 110 137853 - 139178 1554 441 aa, chain + ## HITS:1 COG:lin0223 KEGG:ns NR:ns ## COG: lin0223 COG0366 # Protein_GI_number: 16799300 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Listeria innocua # 217 441 325 552 553 91 29.0 3e-18 MLENKEKKSTYYEAYPESFIDSNSDGIGDLEGLRSKLTIISQLGANYVLINQVFKENSGK VDYYKIKEELGDIEDIKAICEKGKYIRIKILLDFDSKDLLASYGDNLKERLIDLIKYWKE TGIKGIRIKNLDCLFEKNENDAKELIAAIKELTDELELIFIGGFDNPDLVKDDMVDMAYF SKANSLVKEPNSYKEFYNFIDRVQKLSEKIPAGMDLDNFASPRLLEKILDHDEEVRPLSE ALATMLFSLKTIPFIYQGTEIEAKSEYEVDMDGINDEKIKAIYNLYLKDGLDSEEAFNKI KRETNFSAKIPLRWDNSILGRFSEVKNYYGTMIHYDNNYKDYLKHGDSFFFYMYNIIMLR KKESTFGLGDYELLSIDETVYAYKRTYKDKAFVVLINLSDDFYELDEKITELIKDGKVIQ NNNPDYDPEILDAYQAVIVEL >gi|229269865|gb|GG666046.1| GENE 111 140068 - 140799 780 243 aa, chain + ## HITS:1 COG:CAC0284 KEGG:ns NR:ns ## COG: CAC0284 COG0846 # Protein_GI_number: 15893576 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Clostridium acetobutylicum # 1 241 4 245 245 279 56.0 3e-75 MDTLNEVKKIINDSNNIVFFGGAGVSTASGVPDFRSATGLYNRKNDSKYSPEYMLSHEFF IDHPDEFMTYCKENLMIDGIKPNKAHYVLAKLEKMGKLKAVITQNVDSLHQEAGSKNVIE LHGNLRDYYCVNCHKNFDLAYVKKFPAEAHCDECGGIVRPDIVLYGEGLDQNNISYAVNL IAQADVLIVGGTSLVVYPAAGLIDFYRGNKLVLINKETTPRDGIADYVIKGDIADIMDRL VGD >gi|229269865|gb|GG666046.1| GENE 112 140800 - 141180 252 126 aa, chain + ## HITS:1 COG:no KEGG:Apre_1477 NR:ns ## KEGG: Apre_1477 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 126 1 123 123 127 52.0 2e-28 MQKKYGIDEYGIFLVWIAIVAVVVAYFMKSTVLNGISSFIVIYAIYRTMSTNILKRSQEN QIFVENVIDPVKNIFNKDKTKQGNSRDDGFEYISCPSCGQKLRIPKNKGKIKVRCPKCKE KFDAKS >gi|229269865|gb|GG666046.1| GENE 113 141296 - 142471 1708 391 aa, chain + ## HITS:1 COG:no KEGG:Apre_1476 NR:ns ## KEGG: Apre_1476 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 391 1 393 393 570 72.0 1e-161 MPRLIGTVAMGLRAPIVKKGDDLVQIVGDIVEEVAREEVKLRDKDVVAITESLLARSQGN YASIEQIAKDFANKFDNDEVAILFPILSRNRFSILLKAFALSGKKLHICLSYPSDEVGNL VMDEMDLFNSDINAYTDVLSLEEFRKVAGDYKHLFTEMDYPEFYREIAKNSEIHFLNNPV DALKFTDNILVASIHTRNIVKRQLVEAGAKKVLKLDEILTESVDGSGFNPDYGLLGSNLS TGNVVKLFPRNAQDFVNKVQKRLIDETGKHVEVMVYGDGAFKDPVGHIWELADPVVSPGF TDGLTGTPYELKLKYVADNDLSELSSEEAAEEFKKLVRNKDKNTDSNKRLGTTPRQITDL LGSLSDLISGSGDKGTPVVLIQGYFDNYSND >gi|229269865|gb|GG666046.1| GENE 114 142592 - 143530 757 312 aa, chain + ## HITS:1 COG:CAC0496 KEGG:ns NR:ns ## COG: CAC0496 COG1284 # Protein_GI_number: 15893787 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 26 301 3 276 279 146 32.0 5e-35 MKTDESFDQGQKSNQPIRNIDERNVKTREYKLFWMSFAAILMACGTHFFKYPNSFVIGGV EGMSIITSMFVPFNRPQLTLFYNVVLLVIGFFVIGKKFTIRTGYVAILNSLTALALERVF PINGSLTDNKMLELIFTLLMSSVGSAILFNLAASSGGTDIIAMIMKKYTSLEVGKSLLVV DSLFTIASIKIFGIEIGLFSILGLMMKGIFVDMIIGQMNTAKLFIIITSKTEEIGNFIKK ELNRSATIVDARGLYRGTNISVFFCVTSTFESAKFRSFIKKIDPYSFITILNTSSIIGKG WYSSDDSLDSDE >gi|229269865|gb|GG666046.1| GENE 115 143582 - 144460 883 292 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486222|ref|ZP_03916538.1| ## NR: gi|227486222|ref|ZP_03916538.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 283 1 283 292 338 100.0 2e-91 MQKKIKILLISFFTFILPLTSFASNDQQGKDGPNQKAGEKIIITESVAPVSKPEENPKDS AKKEENKADAKPDPNKKDDVKPADNKKEDSAYKDRREAPVDPKAQAPDKAQNPDMERIEK VVDDLVSKLDKNSNLSKALAEMQTSISTDNKASVKVKDVSKKTEQVLKDYNKKIQAATTE QQRKKLENEAADKIKSISENRPSSIDQEKLDEDIPEKKKKILLEVKPDREEDDADDRSQI LALNPIDGEDEEVFFLENPIIIIALIFIISLIVVIGIVIRNNEKRDKRRKKK >gi|229269865|gb|GG666046.1| GENE 116 144509 - 144664 212 51 aa, chain - ## HITS:1 COG:CAC2778 KEGG:ns NR:ns ## COG: CAC2778 COG1773 # Protein_GI_number: 15896033 # Func_class: C Energy production and conversion # Function: Rubredoxin # Organism: Clostridium acetobutylicum # 2 49 3 50 54 74 75.0 5e-14 MKYVCTACGYIYDPAEGDVDNGIEAGTEFADLPEDWVCPVCGVGKDMFEAE >gi|229269865|gb|GG666046.1| GENE 117 144819 - 145196 467 125 aa, chain + ## HITS:1 COG:no KEGG:Apre_1471 NR:ns ## KEGG: Apre_1471 # Name: not_defined # Def: putative signal transduction histidine kinase # Organism: A.prevotii # Pathway: not_defined # 1 122 1 122 127 97 45.0 1e-19 MEIIRTVIHSDLKELKKFRDGFIDCLRKHYYEEGKIFRLRLILDELTANSYKHGNKKDKD RLIEISIVFDEAYILIKVKDEGSGIKFMKEAEKFSESGRGIDLVKKLSDRVIINKSTIAC LIRNS >gi|229269865|gb|GG666046.1| GENE 118 145298 - 147115 2465 605 aa, chain + ## HITS:1 COG:CAC1684 KEGG:ns NR:ns ## COG: CAC1684 COG1217 # Protein_GI_number: 15894961 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Clostridium acetobutylicum # 1 605 4 605 605 639 56.0 0 MIREDVRNVAIIAHVDHGKTTLVDGLLKTSGLFRENEAVKERVMDSDTIEKERGITILAK NTAVSYKDMKINIIDTPGHADFGGEVERVLNMAESVVLVVDSHEGPMPQTKFVLKKAIEL GLPAIICINKVDRPDQRIDEVEDEIIDLFISLNADESYLESPFVYASAKQGWASLEKGVV KEDMTDLLDIIIEYTPAFEAPDTDEFKVLVSTTDYNDYLGTIAIGKVECGTIRKNAPAVI TNYNEKDRLVKSKVVTIYEFDGLNRVEVEESKFGSIVAISGMEDIGIGDTIGTEADHEPI EFTKISEPTLSMTFSVNDSPFAGRDGKYVTSRHIRDRLFKEAETDVSLRVEPTETTEAFK VSGRGELHLSVLIENLRREGYEFQVSKPEVMFKTDENGKKLEPIEIATVDVDQIYTGSVI EKLGRRKGEMIDMHPSASGYTRLIFRIPARGLIGYRTEFMTDTKGTGILNTEFEGYDRYK GDLERRPLGSLIATEKGLATAYGLNAAQSRGQLFIEPGEEIYEGLVVGSNAKGLDIDVNI CKKKKMTNTRASGSDDAIILTPAKKMSVEEMMEFVEEDELIEITPHNLRIRKKILDAQKR YKSKK >gi|229269865|gb|GG666046.1| GENE 119 147124 - 147726 477 200 aa, chain + ## HITS:1 COG:no KEGG:Apre_1469 NR:ns ## KEGG: Apre_1469 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 200 6 207 214 108 37.0 1e-22 MENKFERRISKILVFLIMILFLLTISQRFANGWVLSLCWYILFLGSWIGMLVFSFDVLLN KNARGLSILLAVITSIAFAFLSIHGLSALAIFIRVLPRKIVINNDFFLANNQLIFYSSLV VVYFIQLFNVISLRDKKEIEETEEKVELSEEELRKIRDEKLDSIIAEIDNNNNNDSLSDE DRQILNSHILNDGEEEESEI >gi|229269865|gb|GG666046.1| GENE 120 147730 - 148365 631 211 aa, chain + ## HITS:1 COG:CAC2713 KEGG:ns NR:ns ## COG: CAC2713 COG2344 # Protein_GI_number: 15895970 # Func_class: R General function prediction only # Function: AT-rich DNA-binding protein # Organism: Clostridium acetobutylicum # 3 200 4 203 214 214 54.0 1e-55 MTKQNISLSVIKRLPKYYRYLESINEKGIIRVSSKELSDITGLTASQIRQDLNHFGCFGQ QGYGYNVKELIDELSKIIGVDKDYKIILVGYGNIGHALYQYKSFGDLGYEFEAVFDIEAK TLSDSNLKVRDVNDLPEFLANNKIDIGIIATPKQAAQEVADILCKGGVKGIWNFSPVDLK VSNGAVIESVHLDESLFTLTYFMNSPEDFIF >gi|229269865|gb|GG666046.1| GENE 121 148366 - 150288 2270 640 aa, chain + ## HITS:1 COG:CAC2714 KEGG:ns NR:ns ## COG: CAC2714 COG0488 # Protein_GI_number: 15895971 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Clostridium acetobutylicum # 1 640 1 643 643 506 46.0 1e-143 MNVLNVSNLAKSYPNKVIFDGLSFNLEKGDKAGLVGLNGAGKSTLFNILTGRLRADDGKV FIPQDIKVGYLEQILSLDSNMTIYDYCLSVFEGLIKLESEIRDLEKKMSTETDPDKLAAI MDEYTRKSESYHSENGYAIESELEGTLSAMGFDKADFNKKISDLSGGQKARVELAGLLLE KPDLLLLDEPTNHLDIKAINFLENFIKNYKGTAIIISHDRYFLDATVNRMMVLEHGKLST YSGNYTVFMDKRKKDREVRIHQYKSQQKEIERQEEIIDRLKNLGGSKRKRGISQSRSRQK LLDKMERIEKPIELADTMNLKFTPRIQSGMDVLKVEDLRMSFEGREIFKNISFDIYRNER AAIIGDNGVGKTTLFKIVLGELFQDGGKAKMGESVNVGYFDQEQKSLNLENTIFDEIRDA FPMLTNFEIRSYLAKFMFYDTDVFREISELSGGERARISLLKLMISDCNFILMDEPTNHL DIDSKEILEDAVLDFEGTLLIISHDRYFLNKVASKILDMKSDRMDLYLGNYNYYQEKLRE MNMTEEEKATVTKTQIKKERKKEKLKRDEIRAIKNKIKSIEKDMEEIDKKIKDLTKESLA EGFYDDQARVAEVFREMKDLEDMRDDLDEEWLNLNMELEE >gi|229269865|gb|GG666046.1| GENE 122 150332 - 150895 608 187 aa, chain + ## HITS:1 COG:no KEGG:Apre_1466 NR:ns ## KEGG: Apre_1466 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 186 1 179 179 87 34.0 2e-16 MGKIMRFLYSFMLIVVVLLGALFLAFGIDGQAVFEAFVYNEYLYRLVSNEAFVQIFFMAV GILLIGFAIVLLIVLKQNSNMGFDVLIEDEKGSILLTRRSLEAVIERSVNKFFDVKMLKA KAVIIENERIEAKALVDYYGGEDLKALAEKMREEISKNLKDFTGLDDIRLDLKLDKKEIE VRRNGRY >gi|229269865|gb|GG666046.1| GENE 123 150882 - 151166 180 94 aa, chain + ## HITS:1 COG:no KEGG:Apre_1465 NR:ns ## KEGG: Apre_1465 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 11 93 13 95 96 84 48.0 9e-16 MEDIKKSKDPSMVDVEMRKLDIREKNKATLFKFYRTNKGKVNSLIISFLTLVCLFNFGFF KTLGIWVVMIIGYLVGAYFDKDVRVLQVIRKILN >gi|229269865|gb|GG666046.1| GENE 124 151177 - 151635 565 152 aa, chain + ## HITS:1 COG:SA1984 KEGG:ns NR:ns ## COG: SA1984 COG1302 # Protein_GI_number: 15927762 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 24 139 39 154 169 89 49.0 2e-18 MTENLNKEEITKDLNDGRELGYEESKLIIQDKVVAKIARIAINNVDGILDMKGNIADSIG SFFGSTDRSTAGVNVEVGQKEAKINLDVIIEYGKNARQIFNDIQKAVSQNVKEMTGLDVV TVNVDVVDVLTRKEYQEKQQSVKENEKKQNEY >gi|229269865|gb|GG666046.1| GENE 125 151676 - 152902 800 408 aa, chain + ## HITS:1 COG:SPy1117 KEGG:ns NR:ns ## COG: SPy1117 COG0628 # Protein_GI_number: 15675097 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Streptococcus pyogenes M1 GAS # 5 384 10 382 382 157 31.0 3e-38 MKEIFEEKTRKYFIIGILLIGIFYGFFYLDRIGEILDTTYKVFRPIVYGLVIAFIINLPM NFFHDEIFTKIFKDDKHEKLRRSFSLILSWIIFFAMVTIVLTVLIPELSRAVGVISENIP AFMNSLIDFINGSKLLTNVSKFIVTRLEEINIERISDSFTKILQDFFRPDSDFINKTGSI INSVSQGILSLSIGFVFSLYVSMNKTKLKNGAARLVFANLSEKTARQIVYVAKLSYDSFA RFLETRILSCLALGVACFIGMWVLRLPSAGMISILMGAFDMIPYIGAFLATSIGIILIFT YSPGKALVFLIFILILQNVQQQLFYPLVIGKHQGLPPIWIFVSVIIGGGLFGIFGMIAFI PLATVLYTLLEDNTTKKLKEKSISDEEIEKLTNKSFIELREERIENYQ >gi|229269865|gb|GG666046.1| GENE 126 152954 - 153568 799 204 aa, chain - ## HITS:1 COG:CAC1731 KEGG:ns NR:ns ## COG: CAC1731 COG1564 # Protein_GI_number: 15895008 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Clostridium acetobutylicum # 18 198 20 207 211 71 31.0 9e-13 MKRCFIIGGGDFDGFYDEIRSEDLLITADKGYDYAKKSNLIPDYAIGDFDSTERPNFKNI IVLNPIKDFTDTVAAINFAIEKGYKDITIYAGLGGRESHTISNIKSMFSYKKKGIDIRLK AKGKEIFLLDKDFSYKYKGEDFYVSIFSLTEKSKLDIEGLFYELDDYTMANDDALGVSNQ TKGLDFEIRVKEGILLVIFENFNI >gi|229269865|gb|GG666046.1| GENE 127 153675 - 154892 1221 405 aa, chain + ## HITS:1 COG:CAC0730 KEGG:ns NR:ns ## COG: CAC0730 COG0628 # Protein_GI_number: 15894017 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Clostridium acetobutylicum # 3 381 4 383 383 155 29.0 1e-37 MRELDVKSKNLLKVVVCGILLYFGLYYIGHVADAVGKLYLVIQPFILGGALAFIISIPMN FFESEFAHFDKTGKHKKIISTCSLLLSWILVIASLVILINILVPSIVKVVYTFSIRWPDF VDEIYRLLKKYPITEPFANKFQNTFYGVGWYNVRNAVYTFLQGRKGDIFSTAASLMGSIS SGVIGVFTMFVFSIFILIYKRMLKINGIRILYALMSEERADYINKVFSLSYNTFKDYLFS RVIAVICLSILTFVGMFVMRLPNAAMISIVVGLSDLIPIFGPIFGTAFSTILIFIESPVK SLIFLAYSLIIQQIQENVIYPAIAGNKIGLPAVWVMASVTIGGSLFGVWGMLVSIPVVSV IYTLSHEKIHHMLEEKGFDEEKLLAKGDKIYKIEDIETNDEAYEE >gi|229269865|gb|GG666046.1| GENE 128 154873 - 155475 195 200 aa, chain + ## HITS:1 COG:no KEGG:Apre_0412 NR:ns ## KEGG: Apre_0412 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 199 1 202 202 206 51.0 4e-52 MKLTRSRDFVPVIRSGEKYYGGHQEWLKYEGLSKFFRDRSCVVTAFTNCFFYLFKEGVVD FDTYNEVQYAFYKRIRPKANGVPTAKSLLKRIDIINHKLELNLSYRLLEGNLIKRLSLDQ MISFINEGLKKDTPVILINWLSKKVDIMSHHGLCITEMNEKDGRHEVVVSSWGRRHSFYL EDFYKELRTYTGLIYFTKQK >gi|229269865|gb|GG666046.1| GENE 129 155784 - 156659 1177 291 aa, chain + ## HITS:1 COG:FN0857 KEGG:ns NR:ns ## COG: FN0857 COG0058 # Protein_GI_number: 19704192 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Fusobacterium nucleatum # 25 279 24 278 789 276 53.0 3e-74 MDKLAKDKFAEHYMENLQRITLKRFEDTSNKDRYDALCATIMGLINKDWRETKAKARKER KAYYLSAEFLIGRSLGNNLINLGIYEEVKDLLSELGIDFESIEDYEDDAALGNGGLGRLA ACFMDSAASQNLSLVGYGVRYREGIFKQEIEKGFQVEHGDSWIKDGDGWSIRVDSDAKIV KFRDQQVKAVPYDMPVVGFENGVVNTLRLWQAEPFEEFDFAKFNNFEYDDAVAEKNRAED ITRVLYPNDMQRAGKLLRLKQQYFFCSASIQDMVEVYKRDFPTDLKFELAS >gi|229269865|gb|GG666046.1| GENE 130 156749 - 158197 1765 482 aa, chain + ## HITS:1 COG:FN0857 KEGG:ns NR:ns ## COG: FN0857 COG0058 # Protein_GI_number: 19704192 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Fusobacterium nucleatum # 1 481 307 783 789 519 54.0 1e-147 MIRVLVDENGIFFEDAVKIASKVFAFTNHTVLQEALERWSEDLMQEVSPRCFEIIEEIDK KLVEELKERGFSDAQIDPYRIMTNGTVHMANLAIYVGFSVNGVAEIHSQILKDDTFKEWY RISPEKFNNKTNGITPRRWLVYSNRELTNFITEKLGTDTWKNNLDQLKGLEKYLDDEKVL EELWNIKQKKKKQLAKYILENEGIKVDPTSIFDIQIKRIHEYKRQHLNILHIIHLYHQLK KNPDMDFTPTTFIFGGKAAPGYFRAKGMIKLANEVARVVNNDPDVNKKLKVIFVQNYRVT YAEKLFPAADVSEQISTAGKEASGTGNMKFMLNGALTLGTLDGANVEIFAEAGEENNYRF GATVEELAEIANSYNPFEYYSKDENIKDVVDSLVSGEFNDNGSYYFLDIYNELIKPQDGN RGDQYYLLKDFESYRQTHERLNKEYRNKLEWSRKCLKNIANAGFFSSDRTIVNYADDIWK ID >gi|229269865|gb|GG666046.1| GENE 131 158205 - 158999 1057 264 aa, chain + ## HITS:1 COG:lin0435 KEGG:ns NR:ns ## COG: lin0435 COG0428 # Protein_GI_number: 16799512 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted divalent heavy-metal cations transporter # Organism: Listeria innocua # 6 264 15 269 269 190 48.0 3e-48 MNSEILLGVMIPFIGTTLGAACVYIMKNELKDKVQKGLSGFAAGVMVAASIWSLLMPAMD MVDLRLGRMAWLPAAVGFMAGIAFLLFLDSVIPHQHIDSEKPEGIKAESLRKTTMMVLAV IIHNIPEGMAVGVSFAGVIYGKGNLTMAAAMVLSIGIAIQNFPEGAIISMPLKAVGVSKH KAFGMGVFSGIVEPIAAIITILLSSIMVPILPYLLSFAAGAMMYVVVEELVPEATGEGQS HTNIGTIGFSLGFVVMMILDVMLG >gi|229269865|gb|GG666046.1| GENE 132 159300 - 160487 733 395 aa, chain + ## HITS:1 COG:XF1728 KEGG:ns NR:ns ## COG: XF1728 COG2814 # Protein_GI_number: 15838329 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Xylella fastidiosa 9a5c # 23 330 70 377 447 161 30.0 2e-39 MNKYYRKKVMYLVENKNFHWPTFILMASVTFMAILSELVPSGILPELMTGLGISEAQAGT LVGFYAIASAIFAIPLISATVEFSRKKLLLGLLIGFALSNILVGFAPSYSIAIVGRVIGG ICAGVLWPMIAAYGMKLVDDEHKGLAVAVIMSGTTFGMSLGLPLVTFIGTNIGWRVEFLV IAILIIFIALGSNFMLPEVSGEKRVAANSPLTLIKNKGVLIIILLTFISVVTNYGVYTYI TNLVDSMNYSGGIGFAQVLFGIGSILSVFIAGKIIDKHIKILCLLMLASSCLAFIFFSVF SSISLMVHLGFILWGIGFGALVTLYQTAVARQVPPNASAVATSLQSASFNFSIMVASSLG GAILANGNINNLLILMATILGAGLVVTILSKKTMA >gi|229269865|gb|GG666046.1| GENE 133 160517 - 161776 1487 419 aa, chain + ## HITS:1 COG:STM3334 KEGG:ns NR:ns ## COG: STM3334 COG0402 # Protein_GI_number: 16766629 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Salmonella typhimurium LT2 # 9 404 12 404 426 347 42.0 3e-95 MKKKFINAKVYGHKDASEILVEDGKFSKFGNNLGNADEVIDLDGKLVIPPYVDAHLHLDY YMIGKTDEVKNESGTLFEAIDLWNDFKKGTTKEEMKKRIYQAVEDCLSYGTQYIRAQTDC TDPNLTGIKAALEVRDELKDKCTIQVVAFPQNGMYSYKEAGKTGRDLVEEALKLGCEVVG GIPHNEWSRELGEKSLKEIVALAVKYNKLIDVHCDETDDVMARFVEVLNAEAMMNGIAEK TTASHTCSFGSADNSYAFRMMGLFRKSKLNFVSLPTENAFLQGRQDSYPKRRGITRVREF VDNGVNVCFAQDSIVDLWYPAGNGNLMNILDNGIHLAQLMGEKDFEKDFDLVTYNGAKAM YLQDEYGFDEGKPANFIVLDAPNEFEAIRNRAECLSSVRNGEFLFKKAKREFEVALKLK >gi|229269865|gb|GG666046.1| GENE 134 162185 - 162976 726 263 aa, chain + ## HITS:1 COG:BH0265 KEGG:ns NR:ns ## COG: BH0265 COG1624 # Protein_GI_number: 15612828 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 16 255 13 254 274 239 50.0 3e-63 MNFLNNFITSLMLIRVTDIIDIAMIAFVVYKLFSILKNTRAEQVLKGLIFVLIFASIADI LNLNTVSWVMNQFLTVSLVFIIVVFQPELRTGLERIGRGRSIFSTDKNKKDEDSINELVL AMSSLSRQKIGALVVLERQVGLSDIIESGTMLNADISSELLINIFIPNTPLHDGAVIIRE NTITAAACYLPLSTSNTISKELGTRHRAAIGISERSDAVVIIVSEETGNISIAENGVINR YFDEDSLRIRLRNEMSEKRGEDE >gi|229269865|gb|GG666046.1| GENE 135 162969 - 163964 1119 331 aa, chain + ## HITS:1 COG:CAC3078 KEGG:ns NR:ns ## COG: CAC3078 COG4856 # Protein_GI_number: 15896329 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 21 315 13 311 403 85 24.0 1e-16 MNKILDRLKKYNATSDKQLLILSIIVAIFMWTYVTTSTNPSTNRTFRNIPIIIQNQDKLE EKGYTIVSKDDISSVNVRLTGSRDNIVSLKPDDIQASINVMASRPGITSVDVKVDTPTGI YLDYVDPAKINLNIQRIIEKTLPVNIVIADKLKDGKIVEVNEQNPEQIKIKGPESLVNQV DRIEAHIDDAEYLDGKIHNVAVKALDKKGELVEGVDLDNKDVNLSFFVYETKKVKVRLSV RGSIANGYVETLRAVSPDTVVIKGPGQVIRDIDEISTRTLITGYIRSSKSGEVKLDLPEG VEVYDGDDTVTYKIEIQRLPSATKDAAEEDE >gi|229269865|gb|GG666046.1| GENE 136 163957 - 165291 1078 444 aa, chain + ## HITS:1 COG:FN0243 KEGG:ns NR:ns ## COG: FN0243 COG0617 # Protein_GI_number: 19703588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Fusobacterium nucleatum # 6 425 16 435 451 262 39.0 9e-70 MNKEEVLFRLEDKGYKSYLVGGFVRDKLMGKPPSDVDIATKAFPDEIKEVFKDYKTLDVG KAFGTIKLVADDRDYEITTFRKDFSYKDKRRPGSVIFADTIEEDLKRRDFTINAMALSKD ELIDPYGGQADLEAKIIRAVGNPYERINEDYLRALRAVRFAANLGFDIENDLKEAIRSKV KNLAYISVERQTAEIDKILLGPDPARGLRLLDETGLLGGIFPEVKAMVGFDQHSPHHNLD CFDHTLKVLEGTPLDLTIRLAALFHDTGKPSTFFLDENGNGRFFGHQKISKDLAEERLRY LKYSKKLIEDVGVLIGRHMDSSNPYTEKSVARLLRRIGEENLKRLFDLQEADILATVHDD ISNIDKGRNLLKEILEKKPVLSRKDLAINGRDLTKIGFDEGPDIGFILRKIEKEVFDGTL SNDRQILLNEARIIGLKLDSKAYE >gi|229269865|gb|GG666046.1| GENE 137 165332 - 166096 1224 254 aa, chain + ## HITS:1 COG:SPy1896 KEGG:ns NR:ns ## COG: SPy1896 COG0544 # Protein_GI_number: 15675709 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Streptococcus pyogenes M1 GAS # 2 251 3 252 427 200 46.0 2e-51 MTELKSHENNIAKFEFNVSYDDFKKATDTVYKKNKKRYRIDGFRPGHVPRRVLEKMYGPE IFYDDAIQIVFPEPYEKAVEELGLEVIDQPSVDLDDIEEGKDITFKVEVETKPHPVLGDY NDLVIEEVSEEVTDEDVKAELDRQLEENARLVEITDRPVKKDDKVNIDFDGYLDGERFEG GKAEKYDLVIGSNTFINGFEDQIIGHNVGDKFDVNVTFPEDYQAKEFQGKDAKFVVEINS ITEKQLPELDDLAS >gi|229269865|gb|GG666046.1| GENE 138 166285 - 166740 637 151 aa, chain + ## HITS:1 COG:BH3053 KEGG:ns NR:ns ## COG: BH3053 COG0544 # Protein_GI_number: 15615615 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Bacillus halodurans # 1 124 308 430 431 64 36.0 6e-11 MVNKEIDYEMQNLDQRLQGMGLSLSQYIELTKMDMAQIRGQYKEQASARVKANLVIDEVV LKENIEVTDEEKEKELQETAKNYGVEDLEKFKEIFAKNVSDDTLVENIKRRKAVELLASK AKALPHEEYHKGVEKEAKKETKAKKEEKKED >gi|229269865|gb|GG666046.1| GENE 139 166768 - 167385 650 205 aa, chain + ## HITS:1 COG:NMA1525 KEGG:ns NR:ns ## COG: NMA1525 COG0740 # Protein_GI_number: 15794419 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Neisseria meningitidis Z2491 # 12 203 5 198 204 281 70.0 5e-76 MPQKGDTVLAKNYLVPTVIEQTNRGERAYDIYSRLLKDRIIFLSGEVRDEVSDIIIAQLL FLESEDPNKDIHFYINSPGGVVTSGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAK GKRFSLPNSNIMIHQPSGGAQGQASDIVIQAEQILKIKANLNRILSENTGKDLATIEKDT DRDFAMTAEEALKYGLIDKVIESNK >gi|229269865|gb|GG666046.1| GENE 140 167387 - 168601 301 404 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 160 393 255 448 466 120 36 8e-26 MANKEKSTVRCSFCGKDASQVKRIIAGADGYICNECVELCSDIIKEEKGGDNGFDFDFKL SKPKDIKAYLDSYVIGQEDAKKTLSVAVYNHYKRITSNEDDSEVELQKSNILMLGPTGSG KTLLAQTLARKLNVPFAIADATSLTEAGYVGEDVENIILKLVQAADYDIEAAELGIIYVD EIDKITRKSENPSITRDVSGEGVQQALLKLIEGTEANVPPQGGRKHPSQEYIRVDTTNIL FILGGAFEGIGNIINQRQMDKTIGFGADITKREKTDLSMVNTDDLLKFGLIPEFIGRVPI IVSLDALDEEALVRILKEPKNSLIKQYQKLFDLDDVKLSFNDDAISEIAKKAYDQKTGAR GLRTIIENLLLDVMYEIPSRDEIKEVIVTKESIDDHSKLEYKKK >gi|229269865|gb|GG666046.1| GENE 141 168657 - 170987 2831 776 aa, chain + ## HITS:1 COG:RSc1713 KEGG:ns NR:ns ## COG: RSc1713 COG0466 # Protein_GI_number: 17546432 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATP-dependent Lon protease, bacterial type # Organism: Ralstonia solanacearum # 9 776 11 775 806 669 47.0 0 MKEVYKISEVNLPLIPLRGYWVMPTTMLNFDSSRSISKNAVENAKLNNEELFLVNQLDIF DDNPKMDGLHEIGIVAEIKETFPLPNGDVRVFVQATGLGKIKNLHVAEGFLRAEVEKYEY IEENEEKTDILEALRKLLVSEFRDFAMINDDIPDEIAYGMTEIENYHRLVDLITYHLDLA PKEYYQILSTFNAKERMELAHRIINKEIELKNLGTEIELAVTENINQSQKEYYLREKMDV LKKELASTTGQAENEVDELRAKIKKIKFDKQARKSLEKDLDRLDLIPEMSPDYGVLSSYL DFVVGLPWSKKSKESLDIKKASEILDEDHYGLKDVKERILESIAVKIKNKSVRGSIICLV GPPGVGKTSIAKSVARALNREFVSMRLGGVTDESEIRGHRRTYVGAMAGRVIANINRIGV KNPVFLLDEIDKLGSDFRGDPSSALLEVLDPEQNDKFIDRYLDIPFDLSDVFFLTTANDI NAIPDALFDRLEVIELSGYTLSEKLNIAKKYLIKKQMANTGLKEDEFSISDKVIERVIKA YTREAGVRELERLIGKICRRSVKEILEGKKTIRVTMQNYTKFLGRERFIDDHILKEEKVG VVNGLAWTSVGGTMLTVEANVMEGKGNVEFTGSLGDVMKESGQAALVYIRSNAGKLGIKG KFYEDKDIHVHVPEGATPKDGPSAGITMTTAIASALTGRKVKNNLAMTGEVTITGDVLAI GGLKEKALAAYAYGIKNVIIPKDNERDTEDIDKEIRDKINFIPVSNVSEVIERALI >gi|229269865|gb|GG666046.1| GENE 142 170984 - 171571 633 195 aa, chain + ## HITS:1 COG:BS_ysxC KEGG:ns NR:ns ## COG: BS_ysxC COG0218 # Protein_GI_number: 16079871 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Bacillus subtilis # 1 194 1 194 195 177 50.0 7e-45 MKIKNIELEQVAGFKAQWPKDALPEIAFVGRSNVGKSSFINSFSNRKAIAKISSKPGKTR TINFYRANDTFRLVDLPGYGFAKVSKAEKAKWDKLINEYLHDRENLKEVFLIVDIRHEPT AQDKQMYEWIIDSGYMGFVIATKFDKISKGQIQKHINQIKKKLEIEDEGLIFAYSSETKH NKDVLEEQVEVIINA >gi|229269865|gb|GG666046.1| GENE 143 171617 - 172606 1294 329 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486251|ref|ZP_03916567.1| ## NR: gi|227486251|ref|ZP_03916567.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 329 1 329 329 521 100.0 1e-146 MKNVYDKINDLDFETNEFELNDIEREKLYMTAKTYKKKSNKKYMAVAAALLLALGLTVPP VRAEVSKAFTDLKVSMMETIGASPESYKYVTELHKPIQIGDESIVLENLVIEDDKVYSTI LQDPKGRSLEEDISNNTNIYKIVMNGETYKALGSSGSKGMSDDGKAFVSESMTTFNKTFP ELNQADIDLYIGSGTSNEVVSIKASSNIVNKDNKVLAENYKLENGAKIKLMKINPITMTA VLEGLDKDYTYELNGVDKDGKKIEIDLRTVDNGVSTFIYNKDFSDLSLDEIKDGREITFT LSASKINKNSGRLTDGNYEKIAVFTLSAK >gi|229269865|gb|GG666046.1| GENE 144 172590 - 173114 568 174 aa, chain - ## HITS:1 COG:CAC1766 KEGG:ns NR:ns ## COG: CAC1766 COG1595 # Protein_GI_number: 15895043 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Clostridium acetobutylicum # 3 166 5 177 185 73 30.0 1e-13 MNEEKIIQGIKNRDEKSLRAFIDSYGPVMKASIYKVLTFNENVRMEVLNDSVLAVWDNID SFDPARSSFKNWCAGVARYKAIDALRKEIRHKSVDLDEVSPYLSTDDDISIDETEEILKV LDEKDREIFRKLFIEGYSYDDLAKVYDISKAGLYNRVARGKKKIKEEIQNEKCL >gi|229269865|gb|GG666046.1| GENE 145 173381 - 174118 1284 245 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 88 222 1 137 484 71 40.0 1e-12 MLSSACGGTKTDNKAGDGKDSTVGETTGEGTAKGHNGDLKAVVTFDGDKIAKIDLTHEET KGLGDEAADKLVDEIIANNSVNVETVSGATVTSTAVIEAVKAAIQASGRDVKNFEAKSEA KKGETVEKETDVVVIGGGAGFAAAVSAKEVGANVILVEKLATVGGNTLISGGEYAAPDND LQKEEGTKDSKELFAIDVEEAGENPELIKVLADKATEDAYWLRDDIGVKWLDSLMFFGGH SVKDL >gi|229269865|gb|GG666046.1| GENE 146 174067 - 175113 1360 348 aa, chain + ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 24 347 168 481 484 223 42.0 3e-58 MVRFTNVLWWSLCKRSLIPADHTGNELIKNYLKKAEELGIEVIKEADVKEILSKDGKVCG IKAETKEGDLVVNAKSVVVASGGFGANAKMCYEYDKEIDEHVKSTNSPGATGDGILMAEK LGADTVDMDKIQLYPVCDVETGKLLYCGDTRLVGGALLVNKEGKRFVEELGTRREISMAI KKQIDYVGYLLWDETSNEKTGTMKSNPEEAESLVDRGLMVKANTLEELADHFGIDKDALL ETVKTFNENSAKKEDPEFNLRMLGWQVKDAPFYMMKAAPAVHHTMGGLKINTDAQVLNKD GKWIEGLYAAGEVTGGIHGSNRLGSVAMADITVFGKIAGENAAANAKK >gi|229269865|gb|GG666046.1| GENE 147 175257 - 176288 1215 343 aa, chain + ## HITS:1 COG:Cgl0895 KEGG:ns NR:ns ## COG: Cgl0895 COG1024 # Protein_GI_number: 19552145 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Corynebacterium glutamicum # 1 332 4 327 339 168 31.0 2e-41 MIQTEIKNKIGIIYLDRPQALNALNRQMIGKIEETLKSWEKDSEIKAILFDSKSERGFCA GGDLKEIYVDYLKNDEAKDKDIFFKEEFALDKYIMTYPKPIISHWFEVTMGGGIGLSIHS DLIIADETVNWAMPETSLGFVPDVGVGYFISKLPQAMGQYVGLLGARLYPDDLLSYGFCH MLIDSKDYGELVNRLMDMDADSENLIEDFKEKVLDLNQLPKETKNTKNLEEIEKHFSKDG VEEIKNSLEASDSDFAKESLAILNNRDPFMLEVQFKKYFLGKKLTKQETIDLDLEIIKYG RKTGALEEGIRSVLIDKDKNPTWPTKSLEDVDHEEVDRLLGIK >gi|229269865|gb|GG666046.1| GENE 148 176439 - 177110 813 223 aa, chain + ## HITS:1 COG:CAC2117 KEGG:ns NR:ns ## COG: CAC2117 COG0775 # Protein_GI_number: 15895386 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Clostridium acetobutylicum # 37 205 38 211 230 75 29.0 1e-13 MNIGILVAVEFDAFYNIYKEPIERYKHGSFEVLKYHIHGKDVFVCPSSAGQIRAAIAMTL LLDVYKCTTIINYGVVGALNDRKVEELTVVESVSHYEWDTSDVDDVAKGQYEIFDDVAMK TTGKLVDLAMKIDPHLEKVKLASGDKFIAGLDAKSKLAKEWSCDIVDMEGAAIALACHLY GADFLMIKAVSDALTEGGAEFYANFERASKVAVGIIDDIIKAL >gi|229269865|gb|GG666046.1| GENE 149 177267 - 177620 534 117 aa, chain - ## HITS:1 COG:PH1083 KEGG:ns NR:ns ## COG: PH1083 COG2033 # Protein_GI_number: 14590918 # Func_class: C Energy production and conversion # Function: Desulfoferrodoxin # Organism: Pyrococcus horikoshii # 3 117 24 136 137 125 54.0 2e-29 MKLTETIQTADWKAEKHVPVIHIAKEDGLVHIKANVGEEVAHPNTFEHHIAWIKVFFKPE GAKFPIEVGSYEFKAHGEEEIFTQPCVEARVKTDKGGEVYALSYCNIHGLWENSAEI >gi|229269865|gb|GG666046.1| GENE 150 177767 - 178201 492 144 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_1907 NR:ns ## KEGG: HMPREF9243_1907 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 137 1 137 141 118 45.0 6e-26 MDRLKELKEAREAVDQVIVRIDAGIKQLESASSWGILDILGGGLISSLVKRNKIGEANRS LEEISSSLKSLNKELSDVDISLPDTIPDSFSDELFDMVFDNIFTDIRVRGEIKENLVALK ELRYAIVGLGEKLEKEIRELEAKN >gi|229269865|gb|GG666046.1| GENE 151 178215 - 178748 670 177 aa, chain + ## HITS:1 COG:L67226 KEGG:ns NR:ns ## COG: L67226 COG1335 # Protein_GI_number: 15672251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Lactococcus lactis # 4 167 6 168 171 129 43.0 4e-30 MDVLLVVDLQNDFVDGALGNEGNEKIVSPIEKLVDDFKGEVIFTRDTHEESYLESLEGKH LPVTHCIRGSKGWEIKIPTKDKKIIDKPSFGSYELVDYLKDLDKKEKIKNIYMVGICTDI CVLSNAIMIKNALLNTEVTVIEDLCKATSEAAHQASLVAMASCQVNIIKFADFRQEL >gi|229269865|gb|GG666046.1| GENE 152 178845 - 179567 812 240 aa, chain + ## HITS:1 COG:VC0730 KEGG:ns NR:ns ## COG: VC0730 COG3142 # Protein_GI_number: 15640749 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Vibrio cholerae # 2 210 4 214 254 160 40.0 2e-39 MKLEICIDSFDGMVGAFYGGADRVEICSALSLDGLTPDVGLVDICCEYEDIEKFVMVRPR PGHFTYDDFELGQMKATIIAFKDKPIDGFVLGVLDEEGRLDIETMKELVYLAFPKKVVLH RAFDYSIDGEEKIEELIKMGFERILTSGKKPKAVDGLDLIRDLQIEYGDRIEIMAGSGVN HENIKEIYEKTGIENFHLSASYTGQSEIAYDNFGKAFDDYRWTSSGLVEAARLAIDDLKK >gi|229269865|gb|GG666046.1| GENE 153 179660 - 180616 1342 318 aa, chain + ## HITS:1 COG:lin0242 KEGG:ns NR:ns ## COG: lin0242 COG0039 # Protein_GI_number: 16799319 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Listeria innocua # 1 311 1 308 313 380 59.0 1e-105 MIKDSKIILVGDGAVGSSFAYASTILGIGRQLGIIDLNEDKAEGDAMDLSDALSFTKPKE IFKADYSDCKDAEVVVITAGAPQKPGETRLDLVGKNLKIFKDMIGKIKDSGFEGIYVVAS NPVDILTYATWKYSGAPAEKVIGSGTSLDTSRFKKEIASLIGIDPRSVDAFILGEHGDTE FPVWSHTNVGGLPIYEWVANHSEVDEMALLDTFEKVRNAAYEIINKKGATFYGIGMALAR LVESIINDENSVYSTSSYLDGEYGEKDIFIGVPSVIGKEGVKWVIDVPLTDTEKERMKKS ADTLRKVMVDSGLVEDKN >gi|229269865|gb|GG666046.1| GENE 154 180726 - 181271 382 181 aa, chain - ## HITS:1 COG:no KEGG:Apre_1455 NR:ns ## KEGG: Apre_1455 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 178 1 181 183 124 37.0 2e-27 MNEFLLVNYASQTLANKKIANLFTFKNIKNINIQKMVSEWNEILNKKNMYVEILKTDQKT AQIFAYRPAKLSYVINQTKIKNLLSTLGYKTNDLDQCIRHLKYRFKKESFPHEIGIFLGY PYEDVVGFIENKGAKFLVNGYWKVYADKDQKIKLFDHYNKIKKSYKTIYKSHGDINRLCV G >gi|229269865|gb|GG666046.1| GENE 155 181273 - 181707 574 144 aa, chain - ## HITS:1 COG:CAC0587 KEGG:ns NR:ns ## COG: CAC0587 COG0716 # Protein_GI_number: 15893876 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Clostridium acetobutylicum # 1 133 1 133 142 100 44.0 1e-21 MKKVAIVYWSGTGNTLAMANEIADELKNSDLEAEVINCSSFSEGDVANYDGFAFGCPAMG SEELEEGEFEPMFESVEKSLSDKPVLIFGSYEWAEGEWMHTWQERCEGDGINLVCDGLIA YDYPDDDALKECRRAASDLAKALQ >gi|229269865|gb|GG666046.1| GENE 156 182293 - 184365 1818 690 aa, chain + ## HITS:1 COG:BH0720 KEGG:ns NR:ns ## COG: BH0720 COG1033 # Protein_GI_number: 15613283 # Func_class: R General function prediction only # Function: Predicted exporters of the RND superfamily # Organism: Bacillus halodurans # 1 680 1 676 687 281 28.0 3e-75 MKKISKFISYHPRLVLLVMTLLLIPSWIGYKSTGVNYDILSYLPENLESTQGQEILDKDF KNAATGMLILRGTDHDADKLKKEILEIDGVEDVISKSSIVGDTVPNEFLPDEIRKAFYAK DSTLLMVKFSESSSSFKTMEAIDHIRNLESKEKYLSGISSLVKDTKDLIDRETPIYVGLA VALALVVLSLANESTIIPFLFMLNIGYAILYNFGTNFFLGEISYITKAIAAVLQLAVTTD YSIFLYHRYVEKKKKNESNNEAMAKAIDSTLASIFASSLTTFAGFLVLLLMQLGLGKDIG LVMSKGVLLGLISTVVVLPPMILLAEKLVNRFNHKVLLPDFSRIANFTIKHRKKLFIVFL ILFIPAVYGARNTNLYYNLDRSLPQDLDSIVALNKMKKDYNMASSHFIVVKEDLSKTSVN SMIEEIKDVEGVNNVLSVNSMTGLTVPSEILPQKLKQNFVQDGYQMIMVNSEYQTASNEV NNQIAEIDKIVKSHDADGKVTGEAVLTKDLTILSDRDFKMVNIVSLIVVFLIIALVFKSF AIPIILISAIELAIFINMGIPFYFGHTIPFITSIIIGVVQLGSTIDYSILMMDRFIFEYK KHRNLEKALDLSVRETSKSIVTSALSFFAATIGVGIYSKMEIVSTICIFLARGAIISMLV IIIFLPAIIGLTIPFIEKTTKGFKEGKENE >gi|229269865|gb|GG666046.1| GENE 157 184358 - 186655 3012 765 aa, chain + ## HITS:1 COG:DR0075 KEGG:ns NR:ns ## COG: DR0075 COG1511 # Protein_GI_number: 15805116 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Deinococcus radiodurans # 238 711 171 654 1467 124 26.0 9e-28 MNKKFVKALAVLSVSSILGGNIAYASATKTYKNETVYVTKEADKVKDKTVSVWINKDGRT DVKDKSDLKDIKNLETDEKIETKDGFIDINSKDKDFYYQGKTDKDLPVDVEIKYELEGKA IDFKDLEGKSGKVKITITAHNKVKEKQKSGKMIYSPYLVMTEMTFADDQVKNIEADSAKI VKDGKNQIVAGVLTPGLRENFAGLLDAEKLAKFKDQIEIEIDVENFKPSEAYVVITNEIF QDGKSLGSFDDLESGLDELTTNAGKLVDGSGKLKEGSQSLNKGISDLADGSEKLSAGSEK LIAGFDQMSGAFASLPEKIGPMENAISALDKGGANLNQGLNQYTGGLSEINSKMGDLMDG ADRLNQGATKLNAGIERLSQGSKELREKLSRDAKGGNLLEFATSLKALRTGIDDFSGNIN PMAESLEKLNQGLKSASESSEQISKSLADLSAAGENAPNIEGVISNINQNAASLESQIAS LESKNADGALTSEIESLRAIKNELYGQSQKLGASAKVNAEIYASLKNLSGASNELTSGLN KLSLGLGEMSEKLDGSKNDLEEASVKLGAGIEKIESGLSDSDLMKLGEALSQLDEGLDKL KEGSENMVAGTQANKEGVDKLVNGLNLLDSKSADLREGSEKLSDGLSEFKERSKALSELG SIDDKALNPMAKGLSDLNKGILDLRTGALKLKEGSDTYNEKYEEFDSGLRRYKEEGIDKL AEKTGDIKEIGEILDQMSKLAKKNNSISGSTDDIETRSRIIEKIR >gi|229269865|gb|GG666046.1| GENE 158 187048 - 187623 785 191 aa, chain - ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 191 1 191 192 195 56.0 4e-50 MKELEERILKDGIVIGPNILKVDSFLNQQIDSKLIHKMGVEFANYFRDKKIDKVLTVESS GIAPALATALELEVDCVFARKKQSLTTGDNFYHSSVYSFTKQVTNELIVSKDFIKEGENV LMIDDFLANGQAAKGMIAIVRQAGANPAGLGIVIEKSFSEGRELIEDMDIDIYSLARIAK LEEGKITFVEE >gi|229269865|gb|GG666046.1| GENE 159 187777 - 188472 507 231 aa, chain + ## HITS:1 COG:FN1439 KEGG:ns NR:ns ## COG: FN1439 COG1349 # Protein_GI_number: 19704771 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Fusobacterium nucleatum # 1 231 1 229 245 173 43.0 2e-43 MILEKRLEIIIDTLKKEEAVSNKFLTDKLGVSESTLRRDLSYLQDMGKITRVHGGAVLNS IAAREINFTDNQKTMLQEKSLIGQKAARLIKDAKFIYLDAGSTCNELIDYLSSDQDITVV TNGLMHLDKLINKNIPTILLEGEVKPATKVTTGSKTLEAIARYNFDLAFIGANGFDKRGF YTADVNEAVVKSKAIENSTRAYVLADSSKENVKYFATIAKRDEIKLITEEK >gi|229269865|gb|GG666046.1| GENE 160 188469 - 189374 1055 301 aa, chain + ## HITS:1 COG:SPy0854 KEGG:ns NR:ns ## COG: SPy0854 COG1105 # Protein_GI_number: 15674887 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Streptococcus pyogenes M1 GAS # 1 298 1 302 303 243 43.0 3e-64 MIYTITTNPAIDYILRFDKFEDGATIRAREDEKYPGGKGIMASKIIHNLGEKSINLGFVG GFIGEYIANAIKQLGLGENFVRIKENSRINVKLKYDKETEINAKGPHISSKEVESFFESL RDAKKGDIIVISGSLPYSLDSNFYKKVIEKTEADFTIDIADKKLLDYLSYKPLLVKPNEE ELGKIFQTEITDDNLVAYARKLNELGAQNVIVSLGARGSIFVSGDEAYRARPIDGKLVNS VGAGDSMVGGFVYSCVNNYKKIDAYKLAVACGSATAFSPDIASKDMIDEILKKVEVEKIG N >gi|229269865|gb|GG666046.1| GENE 161 189364 - 191244 2396 626 aa, chain + ## HITS:1 COG:FN1441_3 KEGG:ns NR:ns ## COG: FN1441_3 COG1299 # Protein_GI_number: 19704773 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, fructose-specific IIC component # Organism: Fusobacterium nucleatum # 295 621 1 326 328 366 59.0 1e-101 MEIKDLLKKDLMVLDLKAETKEEAIKEIADKFFEKGYVKSAEDFAEGLREREAQGSTALG ESVAIPHSKNKTVIEPAVLFARKKSGLDYDALDGMPTEIFFAIAAPDGENNLHVATLAEL SKMIMKDGFIGDLKKVENEDQVYSVIEKYSAKEKPVQKEAENKEVAKATINLLAVTACPN GIAHTYMAQEALEKAAKARGVNIKVETNGSDGIKNRLTAEEIEKADAIIIAADKKVETAR FNGKKVIQRPVSDGIRKADELVDKAIKGEANIYHEEAGASAVYKEESQSITQKIYGDLMN GISHMLPFVIGGGILLAISFLFERFTGDKSTIFTFLNGLGGDAFSFLIPILAGYISYSIA DRPGLMPGMVAGLMASRGAGFIGGLIGGFIAGYVVNFLKKATRNLPKSVEGLKPMLIYPV LGLLIVGAIMFFAIDPVFTSVNNFINNWLTSLSGTNMVLLGALLAAMMAIDMGGPVNKAA YAFAIGAFTDTGIGTFMAAVMVGGMVPPIAIAIATTFFKDKFNEEQKKTTVTNYILGASF ITEGAIPFAAAEPQTVLPSCVIGSSLAGAIVGYFGVSAPAPHGGIFILPAMGSLNQALLF VGAVLIGAIIGGLILGAIKKKPENLR >gi|229269865|gb|GG666046.1| GENE 162 191365 - 193056 1744 563 aa, chain + ## HITS:1 COG:SPy1304 KEGG:ns NR:ns ## COG: SPy1304 COG0366 # Protein_GI_number: 15675255 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Streptococcus pyogenes M1 GAS # 1 561 1 565 567 556 50.0 1e-158 MNKAAILHLSESFMAYAISLDQINIRLRADRKDKLDVRLVYTYKCDYPHVWKEEKMEKTF EDESFSYYEINLKLLDKRLAYVFKVSDENETYYLSENGLEEVYDFENFYFTSFHMPYIHE ADFFEPVEWMKNAVFYQIFPERFRRGDFSKDDSYINQAWEDLPTPSSFAGGDLKGIIEKL DHIKDLGVTCLYLTPIFISPTNHKYDNIDYFEIDPQFGSKEDFKKLVEKAHSFGIRIVLD AVFNHMCHENPVFKDVREKGKESIYYDWFYIDGDKADIEKINYETFAHVYNMPKLKTSNK EVQDYLIKIGKYWIEEFDVDGWRLDVSDEVSHDLWKRFRKEIKSAKADAVIIGENWHNAE AFLRGDELDSIMNYAFTNTCLDYFKGKISAQKASDKLNMILMRNRDAANRMMLNFLDTHD TPRFITEIGGSLDKTLAAIALSVVYMGANSLYYGTEVGLEGKGDPDCRRTFPWEKIEEKQ DVLGKIKEILAVKKHEAIKNGGIKIYSEGDLLILERFVNEKTLSLAINLGKEKNFDLGCK EILAAGNFKNQKLGENSFVIWEK >gi|229269865|gb|GG666046.1| GENE 163 193179 - 194018 822 279 aa, chain + ## HITS:1 COG:YPO1384 KEGG:ns NR:ns ## COG: YPO1384 COG2116 # Protein_GI_number: 16121664 # Func_class: P Inorganic ion transport and metabolism # Function: Formate/nitrite family of transporters # Organism: Yersinia pestis # 1 273 1 278 285 171 37.0 2e-42 MQTDLSPDKILPRAIDVYTNKTKIKMGKLMILAFFAGVFVALACEASTLAASSLLGDRSK FPIGKLVQGLVFTPGLIFVILAGGELFTGNTLMTIPLLDKKISLGVMLRSWILVYFGNFI GALFVAFLLSRSGQWFFADGLVGVRTILIAKGKIDFSFGQALVLGLLGNFLVCLGVWMSL GAKSYGSKVISAFFPISVFVLSGFEHSIANMYYLPAGILAKNFPDFASKTGLGLETLKSL NISNMVFKNLFPVTLGNIIGGTIFIGTLYFLAYRNDNKD >gi|229269865|gb|GG666046.1| GENE 164 194020 - 195291 1190 423 aa, chain + ## HITS:1 COG:HI0584 KEGG:ns NR:ns ## COG: HI0584 COG1473 # Protein_GI_number: 16272528 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Haemophilus influenzae # 5 414 8 418 423 308 40.0 9e-84 MEKDLIETRRFYHKIAEPAWMEFKTTINIIKDLRSLGIENISYGRKIHREDLIFGRPSNE KIKAYKESFDLEADFDTKEILEGYTGVIAEIDTQKPGKTFGFRFDIDAMPIRESQSVTHK PFKEGFISENPFAMHACGHDGHLSIGIFLAKWIMENKEKLTGKYILIFQPGEEGLHGGKS ISESKYIQDIDYFFGAHIGMGLPSGKVGVGTTGFLASTKLDVIFRGHASHASALPEEGKN ANLAAASALLNLETLAKHSKGMARINVGVIRGGTARNAISDEAMLKMETRGASHEVNDFL VKRSGEVIKGSAIQYDLDYEIKIAGQAPSIDQANYKFYDEIDSLLKTKGFDTIKSPDFKA SEDVCYFINKVNEKGGSAIHFIFGSDLKAGHHNTAFDFDEKTLTTGLNVFKECILYLNKN GKS >gi|229269865|gb|GG666046.1| GENE 165 195310 - 196494 1219 394 aa, chain - ## HITS:1 COG:Cj0987c KEGG:ns NR:ns ## COG: Cj0987c COG0477 # Protein_GI_number: 15792314 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Campylobacter jejuni # 9 189 10 188 321 61 28.0 4e-09 MTNKKLPIKSIAIEAIMFLAYAFFAVNWIAGSTLTPNILKAFSVEGAHSVSLINNVVTIA KIIGNLVAATIFAKLFPKKSIGLGALLIPAGALLAALSPSFPIFLIGRFIMGFGGALFVV YFSPVVVNYFDPAHRPVVNALNNVSYNVGSILALLLVGPVIKFLGLGRYALVAFSLVSFV VFLAWILIGEDFRITSSKETGSKTFNLKDALGEKIAILMPTMYFGHLTLYMVMLNIFPNT NFSPIPASKISTLFTTGALIGTLLSIMVAKRSTKRVPTLRVSGILTTIIGFFLIHTTSPL LASILALALGTIMYVPLTNFVLIPQEMPGMFSERLTQIMSVYWALVYILETIAYQIIVHI QFNFGDKTALTATIVLSVSFIIGSFIMKEPSEIK >gi|229269865|gb|GG666046.1| GENE 166 196653 - 197588 1085 311 aa, chain + ## HITS:1 COG:L123536 KEGG:ns NR:ns ## COG: L123536 COG1073 # Protein_GI_number: 15672103 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 2 309 6 309 311 104 28.0 2e-22 MKKKIIKIIGLIIVLLCLGFLGFIGKASFDGLTNIASREETQKNINSYRDKYESFAKGKS IEEIKIKSSQKDHDIPAIFIKNPDAKGLAVMVHGMGGTKYSLYGPGQAFYDLGYSLLIYD QRNSGDNEATYNTFGILESFDALDAISYGKNTLDAQEIILYGESYGGATALIAASRDSSL IDYLILDSPVSDSNEFADKVYKQVEEEQGLPIGLMKFMTNIFLKAKLGFTLKDIDASKWA KEADINTPVLIINSDNDKVTPVHMGEDIYKSIRGDKKEIYTAKGFGHTKFAEENPQGFKD VISNFLKNYRN >gi|229269865|gb|GG666046.1| GENE 167 197685 - 198956 1762 423 aa, chain + ## HITS:1 COG:CAC0607 KEGG:ns NR:ns ## COG: CAC0607 COG1362 # Protein_GI_number: 15893896 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 2 420 3 431 433 374 47.0 1e-103 MNSIDFSKDLINFIDASPLNYFAVKNAGEILEANGFKKLREDEVWDLEKGKYYTTRDDSA LIAFEIGEDLKKGFEIIGSHTDSPTFKVKSNPEMADAGFLKLNIEAYGGMIHSTWLDRTL SLAGKVAYEEDGKVKYALVNIDRDLLTIPNAAIHMNREINKGYAYNPQDNLYPLVKTIKD RLEGESYLLNILAEELAIDPENILDFDLGLYDRQKGALINDMVQVGRLDNLGSVHASLMA LVDSKPGRNKMILLSDNEEIGSRTRGGAASNFLGNILERIAQKFGLDREGYQIMIENSMI ISADQAHATHPNYQAFADPTNKVRMNEGLVIKIAANGAYASTIETKARLMKIAKKYGYKL QTFHNRNDKQGGSTIGPITSTSLGIKALDVGIPLLAMHSIRELAGVDDIYEAYEIYKKFF EED >gi|229269865|gb|GG666046.1| GENE 168 198957 - 199253 546 98 aa, chain + ## HITS:1 COG:CAC2786 KEGG:ns NR:ns ## COG: CAC2786 COG0011 # Protein_GI_number: 15896041 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 98 1 99 100 92 53.0 2e-19 MAVVEVCIIPIGTKETSVSKYVAEAEKILMAEGLKYKLNPMGTVIEADADSALAAIRKMQ ESVFDKGCDRVYTVIKMDDRRDKKATMEQKIKSVEDRL >gi|229269865|gb|GG666046.1| GENE 169 199476 - 201536 2018 686 aa, chain + ## HITS:1 COG:CAC2658 KEGG:ns NR:ns ## COG: CAC2658 COG3968 # Protein_GI_number: 15895916 # Func_class: R General function prediction only # Function: Uncharacterized protein related to glutamine synthetase # Organism: Clostridium acetobutylicum # 2 683 6 693 696 520 42.0 1e-147 MKEFGNLAFDKKTMKENVPYPVYLKWKEAARNNATLDRETADSIAHAMKIWAISKGATSY THWFQPLNGKTATKKTAFLNRDDKHNPINRFSGKELIIGEPDASSFPSGGMRSTFEARGY TYWDLTANSFILDKVLYIPSVFVSFYGEKLDKKLPLIESMNMVSKVSSKLCNLFLKDEHT YRVKAKVGLEQEFYLIDKKYFDQRIDLEYSGMTLVGSDPMVEKELISHYLGAIPERVNDF YEDVNKALYDLGIYMEAEHNEVGPNQFEIAIMFENANISVDNNQLLMYILEKTALKHDLV CLLKEKPFKNMAGSGKHNNYSLATNYGKNLFSPGKDPKNNMIFLLFLSAMVEFCNKYQKL IRIASSTVSNDYRLGGNEAPPAIISMFIGCDLEEVLKAIANDDFEEKIIANKVKIPHLGE IKTDTSDRNRTSPIAFTGNKFEFRMLGSSQSAADLNTVINIGMAEALEKIYARLEGCSEE NLKEEAYKIIKEIYLANKNILFQGDGYSEDWKKEAEKRGLENYPTYLDALKAAKDARAYA IFEKVGIFSQKEIESLIYVGFEDVIKFFSAQLEILNNLIHQEILPSAMREIKGIKDYLSF MENEKLSQRARRINEEVGELLAYSEKISHLIERSEEIPDIEAKADFLQKETRQVAGEVRK ISDSLEKLISRENYSMPNYVDMLKTL >gi|229269865|gb|GG666046.1| GENE 170 201677 - 202186 746 169 aa, chain - ## HITS:1 COG:no KEGG:Apre_0392 NR:ns ## KEGG: Apre_0392 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 6 165 1 160 164 165 66.0 8e-40 MQTNKVQTRNLTVSAIFMALGLVLHLMVPGVFFGVKPDFLLSMMFISLMIVGDAKEAILI GVAGGIMSALTTGFPGGQIPNFIEKIITSLVVFYIIKAMDKNFTIPKIILIFALGTMVSG TLFLSIALTMTKQLNLFIPSYPAVLVAMAINAILGIFLYQATRRMNLLR >gi|229269865|gb|GG666046.1| GENE 171 202515 - 203819 1677 434 aa, chain - ## HITS:1 COG:MJ0326 KEGG:ns NR:ns ## COG: MJ0326 COG2252 # Protein_GI_number: 15668500 # Func_class: R General function prediction only # Function: Permeases # Organism: Methanococcus jannaschii # 4 433 3 432 436 360 49.0 4e-99 MAEVSFLEKTFKLNKHGTNVKTEIMAGVTTFMTMSYILAVNPGILSEAGMDYGAVFSATV IASVVAMVLMAFYANLPFGLSAGMGLNAFFTYTVVGQMGHSWQFALTAVFLEGIIFMLLS LVGVREAIFNSIPTTLKKAVSVGIGLFIAEIGLLNAKIVVKAEPALALGNLKSLEAFIFF FALVIMIVLTAKKVKGALLWGILVSTVLSLILGVTHLPDTNIVSLPPSIAPVAFKLDFSN IFSLEMFSVLFSFLFVDIFDTLGTLTGVATKAKMLDENGNLPEASKALMSDAVGTTVGAL LGTSTITTFVESSSGVAEGGRTGLTALATAGCFVIAAFFFPVFSIIPPAATSAALVTVGL FMLSTVVEINFEDITEAFPAFMTILMMPLSYSIAEGIAFGMMSFAAIKLLTGKGKEVSWV IYVLAIIFFVRYLI >gi|229269865|gb|GG666046.1| GENE 172 203955 - 205202 1453 415 aa, chain + ## HITS:1 COG:FN1486 KEGG:ns NR:ns ## COG: FN1486 COG1253 # Protein_GI_number: 19704818 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Fusobacterium nucleatum # 19 407 17 411 426 222 35.0 8e-58 MSHTNWIELIVIIFGVVGSAFFSSSETALTSLNVFKIRQMEENGVENSSLVRKLTDNIGK VLTTILIGNNIVNIATTTVATIFFTDLFGAKGAIISTIVLTLTILIFGEVTPKNIASSAS EKVALRVAKPIKFFDFILKPMSFFLQAITNFLTRLIIGENAQKGDIVTEEDLKTIVDVSE EQGVINDQESEIINNVFEFGDSDVEDIMTARTNMEAIAVDMEDKELKDFLKNCKHSRIPV YGKSIDNIIGILHMKDIVAFIAEDKELNIEEMVRPAFYVYDNMHIFDLFKQMRGENVSLA IVIDEYGGTSGIVTIEDIVEELVGEIEDEYDTHLETVLKINDKEYLVNPSIHINDFNDYF DTDLEQIKNDSIGGFLIDKLGRIPKLGDSVEEDGIKISVVQINRYKLEMLKVEFS >gi|229269865|gb|GG666046.1| GENE 173 205212 - 206858 1900 548 aa, chain + ## HITS:1 COG:FN1824 KEGG:ns NR:ns ## COG: FN1824 COG1227 # Protein_GI_number: 19705129 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase/exopolyphosphatase # Organism: Fusobacterium nucleatum # 3 544 2 534 538 258 30.0 2e-68 MRETVYITGHKKPDTDSVMSAIAYADLKNRLGEYDAIPIRLGKLSQESRFVLDYFGVKPP EIKESMKLTVGDLAIDKGTMIDPSIPIRKAWDTFQKGATNSLTVVDNKGEIVGIASLSNI TKSYMDVWDDEILGRSNTSIDNIVDVLAAKIICLDDDKATFPGKMTVFAMGGDEKNLDNV FAEGDIVIAGNRTEYYDYLLRQKISLLILTNGASLGEDMVDLAKENKVTVISTEFNSFMT SRLLPLTIPVSQVMTTENLIYFKTDDPLDLVKDMMAKSRFRSYPVVDAKKRVVGSISRYH LISSTKKKLILVDHNERNQSIDDIDEAEIVEIIDHHRVANILTTAPVFFRAEPVGSTATI ISEMYLESGIRPSREIAGILCAAIISDTLLFRSPTTTDIDRRILDRMSKIAGINPEEFAD KMFRAGTSLKGKSAKDLIEGDIKTFTIGDANVRVGQVFTMNPEELVPIMDDLKKLMADKI KERGEDTFVLVLTDIFNQRSELLVVGEYYDEIKEEFGDLTPNGTINADGVLSRKKQVIPK LTAAIVKA >gi|229269865|gb|GG666046.1| GENE 174 206905 - 207420 522 171 aa, chain + ## HITS:1 COG:lin0387 KEGG:ns NR:ns ## COG: lin0387 COG0494 # Protein_GI_number: 16799464 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Listeria innocua # 1 164 1 163 169 121 38.0 8e-28 MEILDIYDKDRRRTGKTYPRNEEIPHGGLRLIIHILIFSDKGELLIQQRADHKKMGGLWD ISCGGACQMGEDSCEGARRELNEELGIDFDFSSIRPILTANFAQGFDDFYILRKNIGINE LKLQKEEVKAARFASRAEVLDLLAKGEFVKYKKSFLDLLFDLNDDERFMVV >gi|229269865|gb|GG666046.1| GENE 175 207461 - 207676 435 71 aa, chain - ## HITS:1 COG:no KEGG:Apre_0399 NR:ns ## KEGG: Apre_0399 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 70 9 74 75 96 76.0 3e-19 MTENTQDKNKVTITRDMIIGDIIQAKPEAINILMMSGMGCIACPTALYESLEEACMVHGM DPDYLLEQLND >gi|229269865|gb|GG666046.1| GENE 176 207759 - 208091 349 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486284|ref|ZP_03916600.1| ## NR: gi|227486284|ref|ZP_03916600.1| hypothetical protein HMPREF0072_1687 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1687 [Anaerococcus lactolyticus ATCC 51172] # 16 110 16 110 110 161 100.0 1e-38 MEKEKLLEEKKNELKILEEKILAGYKVSFLKLFAVPLILAIAGMIIGSFCGFDDTQKVGS LVIIFILALFICGVIVKYRLHKQEESDIENRLRLQREIVKLIKELRNENN >gi|229269865|gb|GG666046.1| GENE 177 208078 - 208728 673 216 aa, chain + ## HITS:1 COG:STM3049 KEGG:ns NR:ns ## COG: STM3049 COG1272 # Protein_GI_number: 16766350 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Salmonella typhimurium LT2 # 6 216 11 217 219 113 34.0 3e-25 MKIIKYSKSEEFLNIATHLLGFVLSLIFFLPLVISTYKDGKIVDFLAWLMYFIAIALMFL ASSLYHSMTNPLARTIFRAIDHGVIYLTIAGSYTPVILIGLKSTFSIIIFVIIWILAITG ISMNIIAFATGKEDKIGKASMIIYMAMGWISVLLLYQIYKHIGISYILFLVLGGLFYTIG AVFYAIKKIPYNHAIWHIFILVAAFVMLYGNIKYLG >gi|229269865|gb|GG666046.1| GENE 178 208820 - 210667 2513 615 aa, chain + ## HITS:1 COG:BH1007 KEGG:ns NR:ns ## COG: BH1007 COG0326 # Protein_GI_number: 15613570 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone, HSP90 family # Organism: Bacillus halodurans # 2 615 3 624 625 543 49.0 1e-154 MKQEFKAEAKKVMDLMIHSIYTNKEIFLRELISNASDALDKLYYEDLKSDKTTNKEDYFI EIIPNKEARTLTIRDTGIGMDEEDLQNNLGTIAKSGTEAFRKSVDSSDIKDLIGQFGVGF YSAFMVAEKIVVLSKKSGSKKAHIWESEDADGFTIKEASKASTGTDVILYLRENTEDENY DIYLDQNTIRGLIRKYSNYIRYPIQMEITKTRIKEGSPEDKPEYEDYRDMTVLNSDKPIW KEEKKNLADEDYINFYQESHFGFDKPLSWVHFKAEGLVEFRALLYIPEKAPFDYYSKDRQ IGLELYSHGVKIMDSCDEILDDAYSFVKGVVESDDLTLNISRETLQQNRQLRVISKQINK KINAHLKEMMEKNREDYEKFYKEFADSIKVSIYESYGANKEDLQDLLLFYSRKEDKLISL KEYKEAAPSTAEFIYYGTGESLEKIKSSPALKMVDEDKDVLLLDKALDEFLIKMLGEYEG LKFKSITAEEESKDEDKEDSEIISFIKEAMPEDVVDVTFTDKLEDVPSLIKERGEVSIEM EKTLKNQPNAFGIKAEKVLEISTKTKAYDLLEKAFKDDKDKAKMIAGLLLDQARLIEGLE IEDPVAYAKNIWKLM >gi|229269865|gb|GG666046.1| GENE 179 210907 - 211323 506 138 aa, chain + ## HITS:1 COG:no KEGG:Sgly_0826 NR:ns ## KEGG: Sgly_0826 # Name: not_defined # Def: hypothetical protein # Organism: S.glycolicus # Pathway: not_defined # 26 138 27 143 143 89 44.0 3e-17 MNRGFRILLAIMILFSLTGCKGKTDGDITIDKGDSSKFSEAEIDSAIKVVKDNFSFPGSK LKAVSYDEDKSEDAIKDFMEYGKGEGSDIDPNNIIALFSEFDVTGKNPVLSKGEYKNYSW ILVREDKDKEWKIEDQGY >gi|229269865|gb|GG666046.1| GENE 180 211739 - 212155 486 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486288|ref|ZP_03916604.1| ## NR: gi|227486288|ref|ZP_03916604.1| penicillin-binding protein repressor [Anaerococcus lactolyticus ATCC 51172] penicillin-binding protein repressor [Anaerococcus lactolyticus ATCC 51172] # 1 138 1 138 138 216 100.0 4e-55 MEFSDGELLVMEELWKGDVLDENGEIQALALSKILMERHNISKTSCYTFFGRLVEKGAIA RRYPKYTIRVLVSREDALLNKQKEAFHKLFKGSLLNMCKTFLQNEEVTKEEIEEMKKLIA SFDEEECQEEEKNDTKSN >gi|229269865|gb|GG666046.1| GENE 181 212136 - 213494 1031 452 aa, chain + ## HITS:1 COG:SA0039_1 KEGG:ns NR:ns ## COG: SA0039_1 COG4219 # Protein_GI_number: 15925746 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component # Organism: Staphylococcus aureus N315 # 5 279 2 304 333 73 25.0 6e-13 MTLSLTSVLILEKSIKSFFLLAIIFLVRPILNKKSFRSASLILWIVLLIYLISPYELEIG IESVKGSRILLAITNFFNYSLGWSVNKIGSIFFKLNRLIGSILIFTYLGIKIYKFHTVMK RSILTHNTLCEEKISEFGLKRKVEIYVNNNLKTPLTFGILRPKIILQDHILADEKLLDHV LIHELTHIKKFHILLNHMINIVACLYWFNPLLWLSLKYLDQDIEINCDKLVVENLGDTRK NRKAYCSSMLKLVEREFYENNLYLKLNPNIERMEIIKIWKKTLLGLISFILAFTLSLPAF ANVTDLSQDRVDAQGEEVKSIEVNIDDRVQKISDEEYQKLELGKLSVRESGLANVDEQIK LGSFEKTSYEFEINDDKNEAFIINLKDMSCSGGIKYQVFIEEDGEIIYNGNFASDSILKV KGQKGSAYIITVSNEYNKKLLGEVSINTYASK >gi|229269865|gb|GG666046.1| GENE 182 213621 - 214721 893 366 aa, chain + ## HITS:1 COG:no KEGG:Dtox_1762 NR:ns ## KEGG: Dtox_1762 # Name: not_defined # Def: hypothetical protein # Organism: D.acetoxidans # Pathway: not_defined # 2 358 7 390 397 73 26.0 1e-11 MFIRKNKLIRLISLAILLVLLSSCKKSNFKFSENKDKIEYVLSLSRMLENRAELIFIDKD GSIIEQAKYKGASINSLNYFDNKIYMHSYRTNEHFIYDDKGFEKFSLESEYADSPNITTW FVKKGKDGLIEGINVGLIDTDYYITSLAYSNEKVRNEILLKWEYLDDAIEVDGKIFLEAY NEISSKYRIIVIDKEKKTSNIINFDKPYIDPGKQMIQFNESVVDYGHIGSSSLLYLIDSN TNESKEITFKNENILYVFVNDNLKVITNKNIYDLNSELEIVNKKEIEDTDLIKDIEDNKL GLRKIIDKENILSVLYTSEDFDNVEVGCIREYDKKDMKLIRNIDIKLDGSREWMGEQVDF ISIDNK >gi|229269865|gb|GG666046.1| GENE 183 214929 - 215096 58 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486291|ref|ZP_03916607.1| ## NR: gi|227486291|ref|ZP_03916607.1| hypothetical protein HMPREF0072_1694 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1694 [Anaerococcus lactolyticus ATCC 51172] # 1 55 1 55 55 83 100.0 6e-15 MRKIKIIVYSLCVIISFLILGELYVYNLDSFSNDYINCTFAVNQVEDLSVAKMIS >gi|229269865|gb|GG666046.1| GENE 184 215315 - 216874 486 519 aa, chain + ## HITS:1 COG:no KEGG:Sgly_1037 NR:ns ## KEGG: Sgly_1037 # Name: not_defined # Def: hypothetical protein # Organism: S.glycolicus # Pathway: not_defined # 2 456 135 592 656 160 27.0 2e-37 MFFTNDAEDLTQTREFKKELIDQYGGGFPKYYGKSNTLRNTTLLVLSIVYLVLILITTFE LQISKKENYIKLIQGVDIVKSNLKLFFKDQLILGMITAILYLFIKRFYYLEYIRYYLAVA YSLQLLLALILYIRTANKIEKTGIRAENNNTVVKISYGVRVIVLLILIQLMYSNGLIIKN GLDYAKQKPFFENHKEYSYYQLNYRIDNSLGKDIDNTDDTALIHKYLNDKYYERSMLMFN FSRNLGGLESILVNKKALEEQEIHLPLHDLKEGTDLAVFYQSELSDDTKEEIERVLELYY PSNSKIDYVQYKDKIEIIAINDTNSLLRSVLLESPLVILETRNMGISISNADAMLYYAYS TPYDISGQEYEELIEKFQLENQIAKRTNIYDVFTFELNNIRRNTTMLLFMNLLFLGLNFL ILAFIIRMKYFLRRKEFVLKTILGYSIFEKNKIFLLTQALTVLISLLISCLIYIHLSVFN FKVFMILAIVLITLEIIYTMIQVKSKEEILLAHIIKGGQ >gi|229269865|gb|GG666046.1| GENE 185 216871 - 217494 277 207 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 202 1 209 245 111 32 5e-23 MKVIQIKNLCKNFDEHVLFKNFNLIINDGDFLCISGDSGTGKTTLLNMIGQLEPYQEGEI LFEGKPIETKKDKLDLFRKKLGFIFQNFVLVESKTVEENLKLIRKEDRTDVSIDSALKMV GLDDKKNSKVYTLSGGEQQRVAMARLYLKECKYILADEPTGSLDRKNAEKIFEILKQLND IGKTIIIVTHDEYLKSKVEKRVNLNEM >gi|229269865|gb|GG666046.1| GENE 186 217484 - 217960 285 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486294|ref|ZP_03916610.1| ## NR: gi|227486294|ref|ZP_03916610.1| hypothetical protein HMPREF0072_1697 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1697 [Anaerococcus lactolyticus ATCC 51172] # 1 158 1 158 158 275 100.0 7e-73 MKCKDRKVLSKFISAILIIVLVFHLLWYINYSKFPKASGYELGVKNYYKEFEEYIISYHP PQYPSFTGNYAISDYEEDVQIIFWPKTLMKKESEIGVTLYNKENNTSYSFYVDDQFRYLA DKSTLDEPEEEIALKLLEKKEGKLKEYMTVLLDEIESK >gi|229269865|gb|GG666046.1| GENE 187 218141 - 218473 217 110 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMLRKLLVKPSVSIICLILTLILGIVGNYVWVTFRTGSGEIIIRKYNFLSATIFGYGLHF PLIVIIITMSLLLLSILKLVRSSAKIRFKFLVILVVIDIVCIILPILIGM >gi|229269865|gb|GG666046.1| GENE 188 218924 - 219397 490 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486296|ref|ZP_03916612.1| ## NR: gi|227486296|ref|ZP_03916612.1| hypothetical protein HMPREF0072_1699 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1699 [Anaerococcus lactolyticus ATCC 51172] # 1 157 6 162 162 284 100.0 2e-75 MKKRFTLLVAIVMLLSTITTNVFASSANNNLELSPKELQEWFNGLSKEEQKSVNYDLLQS LRLSDKDIKWLSWYNSLPKEAQRAVNYFPSQLLKVFSANEVSKVDIVDLKAQEDNQEEAK KPARKAGNNAKTGITGVAGVGGILTASLVTYGVSKRD >gi|229269865|gb|GG666046.1| GENE 189 219590 - 220165 591 191 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486297|ref|ZP_03916613.1| ## NR: gi|227486297|ref|ZP_03916613.1| hypothetical protein HMPREF0072_1700 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1700 [Anaerococcus lactolyticus ATCC 51172] # 1 191 8 198 198 303 100.0 3e-81 MKKKVVFLIIMLIIAATMRNLFPSTSKIDSEIHKDRYKEFEYFDKEYNIESFQKDLLELK PGLSSDEVKLYTQDYIDAYNMFKDMYPELSSKEIAKKASSSILNKLDYLVDDYEYYKSKN GKVSYEPDGYELVVNYINENLNPGYEATLDTTEKNIEILKKNLDKMNKSDQELAMLYIED MELEEKLNGYK >gi|229269865|gb|GG666046.1| GENE 190 220152 - 220586 413 144 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486298|ref|ZP_03916614.1| ## NR: gi|227486298|ref|ZP_03916614.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 144 1 144 144 199 100.0 6e-50 MVTNKKNVLLISIISFIAVIIIFLYFNNDKSHKKTREILPENYYEIEFCEGDAYKKVKFT KEIKKDLSDFLIANDIKELKKDNWLKIEPMKFIKFVSDGKTKLLIYTENDNTYIESYENG KIVKTYIIESDVTEKIKNIIKNGN >gi|229269865|gb|GG666046.1| GENE 191 220800 - 221795 929 331 aa, chain + ## HITS:1 COG:no KEGG:BLD_1821 NR:ns ## KEGG: BLD_1821 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 8 173 28 197 202 113 42.0 1e-23 MTKKEKFSNKETAYYIVNSDMLKKSGGLTGLDIDGEITSEERLKIQDLAEFAYKDKDLIA GGHRANNNLIIDEDGNVKEFFLLDNPNYSGVTALTSDGENVIAIMNGNLADNTYKNLLVI QDIEGNVKEKKILDIYASDAIFLGNKIFIVGSFLQADKNLWSSKIIAYDCRSGEINENIL SKDSDYRKVLIIGDKVYCLSANMDNEARKIDVLDKNTLKKINELEFDDLIDGIFAFKEDL YGIIDNKICKIEGDNEFNVLKPLSNDTFVDSYLINDENLYVYSRTENPTKEKGKINLGTI TKFNLNSGESLETPVLIRNKNYDNIIFYPVK >gi|229269865|gb|GG666046.1| GENE 192 221828 - 222367 479 179 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486300|ref|ZP_03916616.1| ## NR: gi|227486300|ref|ZP_03916616.1| hypothetical protein HMPREF0072_1703 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1703 [Anaerococcus lactolyticus ATCC 51172] # 1 179 1 179 179 325 100.0 9e-88 MNYTKSLSFKKVLTILIGSFLLSVMFLLTSCSKEPVSENKEVEFPLDDKGYPQNNVVMIN NKAYPIDLVGESHMGSEIEVKMDGDSDIVEIVLPQRLPINYWSLDEKENLNLISYIMTDF PIKNENMVEGPSAAVQKFVLNVAREESSEILLKWANVDEVDKLFKDKKADYLLKIKVSY >gi|229269865|gb|GG666046.1| GENE 193 222423 - 222620 232 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486301|ref|ZP_03916617.1| ## NR: gi|227486301|ref|ZP_03916617.1| hypothetical protein HMPREF0072_1704 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1704 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 65 103 100.0 3e-21 MKNIYNICKTCLGILFALISIYVIKECVFGHYIEGVLMAKTLPLSITLIAIAILFFAIEN KNKGE >gi|229269865|gb|GG666046.1| GENE 194 222777 - 224165 1841 462 aa, chain + ## HITS:1 COG:CAC1091 KEGG:ns NR:ns ## COG: CAC1091 COG1362 # Protein_GI_number: 15894376 # Func_class: E Amino acid transport and metabolism # Function: Aspartyl aminopeptidase # Organism: Clostridium acetobutylicum # 6 459 10 463 465 477 51.0 1e-134 MEDIRKSAWLELTEAELKDLDVFSKDYLGFMDKSKTERMAVKEIIKRAEEAGFRPLEDLI KAGEVKAGAKAYAINRNKAVALFVLGSKDLEEGMTIVGSHLDSPRLDLKPVPLFEESHAA YLKTHYYGGIKKYQWTNIPLSLVGVAFKKDGTKVEISIGEKDDDPVFFISELLVHLSADL NQKKAGEVIEGEKLNIMVGSIPLKDEKENPIKKNVLKYLKETYGLEEDDFMVAELNVVPA TKARDVGFDRSMIMAYGHDDKVCSFASLKAILEAGENIPEKTLVGLYVDKEEIGSVGATG MTSQFFEDMVLEILEAEGNGNIVSLKRALRNSKVLSADVTLAEDAGYLDATEPMNTAKLG HGVALTKYTGSRGKGGSNDADGEYLSEVRLAFAKENAIWQTGELGKIDQGGGGTIAYILA EYGMSVVDCGTPVVSMHAPLEVISKADLYQTYKAYLAFFKYI >gi|229269865|gb|GG666046.1| GENE 195 224314 - 224553 318 79 aa, chain + ## HITS:1 COG:CAC2904 KEGG:ns NR:ns ## COG: CAC2904 COG4466 # Protein_GI_number: 15896157 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 3 75 4 74 78 57 41.0 7e-09 MAQRSVHDIRKEVENSVGKEVILKADMGRKRVKTKTGVIVDAFPSVFTVKVNNEFDVERT ISYTYSDILTSQVKLTTDK >gi|229269865|gb|GG666046.1| GENE 196 224622 - 225452 1185 276 aa, chain + ## HITS:1 COG:VC1177 KEGG:ns NR:ns ## COG: VC1177 COG0613 # Protein_GI_number: 15641190 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Vibrio cholerae # 5 248 4 250 290 89 28.0 6e-18 MKYADLHMHTSFSDGDYDIKEVIEMAVGAGIKTMAITDHDRADHFEKIKEIGKDFDIILI KGLEISAYDFDSHKKVHIVGLFLPESTPEIDKLNAITNTKREAYHLSLLPKLAKDGFELD YDYLKTFAKNSIIYKSDIFWAMKKKYPERMEGLGFKDIFHEKTTDDLARTMGYIPVKDAI EAVNADGGLSILAHPQEYNNWDEIEKYKEMGLRAMEINHSRMKDGDFERAKDFANKLDLL MSGGSDFHRLGRFELGDYGLSEDEFRALEDGFSRNN >gi|229269865|gb|GG666046.1| GENE 197 225526 - 225909 335 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148984704|ref|ZP_01817972.1| 50S ribosomal protein L20 [Streptococcus pneumoniae SP3-BS71] # 2 126 4 126 126 133 52 9e-30 MKFLHTMVRVKDLEKSFKFYTEELGFVESRRREFPEKKFDLVYLMLPGSPDYELELTYNY DQEEGYEIGTGYGHIAISHPDIYTLREALMKKGYEVTEIRGLTPNSNKYFFVTDPDGYRI EIIQKED >gi|229269865|gb|GG666046.1| GENE 198 226037 - 226354 504 105 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_499 NR:ns ## KEGG: BBMN68_499 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 16 101 9 95 100 102 62.0 4e-21 MVITKEDAMGNDKREWIENLDDSEIDFIKRFILESGSLKEMAAIYGVSYPTVRLRLDRLI EKIKLSDKEDKSYVSLIKSMAIDGKITLDAAKILIEEYKKEGEEK >gi|229269865|gb|GG666046.1| GENE 199 226351 - 226659 419 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486307|ref|ZP_03916623.1| ## NR: gi|227486307|ref|ZP_03916623.1| hypothetical protein HMPREF0072_1710 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1710 [Anaerococcus lactolyticus ATCC 51172] # 1 102 1 102 102 133 100.0 5e-30 MKLAAVNSVITILILFVPLILQILICKYIKGRAGLILPGLSFIISIIYILNIPEGVGDWW MAVLITMVIANIPTIIYYLIYRYYDNKEKQKDELDKMKIMDM >gi|229269865|gb|GG666046.1| GENE 200 226677 - 227201 599 174 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002873|ref|ZP_04049866.1| acetyltransferase, ribosomal protein N-acetylase [Anaerococcus prevotii DSM 20548] # 1 169 1 169 172 235 65 2e-60 MKNLKLYLPKINELNFAKNLLNDPATMAYNRGYNLPFPGYDKETGTITHDQAYWKKWYEL YFSNPSEYFYAYIYDKDLKSFVGDVNFHPSRLNDFTRDIGIVIKDEFRGQGYGKLGLKLL VNKAFSYDSIRALANNFEKERVFALKIHKELGFKPIENNNKIIDLLLKKSEYKS >gi|229269865|gb|GG666046.1| GENE 201 227434 - 227715 482 93 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKLFSLLALALVLSACGNSADKKAEEPTETTTKTEAPAEEKAEEKVEDAKDAKEDADKA EEKAEDAKDEAKDAAKDAAEQKVEEKTEDKGNN >gi|229269865|gb|GG666046.1| GENE 202 227725 - 229071 1080 448 aa, chain - ## HITS:1 COG:FN1151 KEGG:ns NR:ns ## COG: FN1151 COG0534 # Protein_GI_number: 19704486 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 6 448 11 448 448 139 26.0 1e-32 MKLNRKEYFKKSLTIAWPAVLEFFFVSIAGIIDTFMVSSLGPAAIAAIGLTIQPKFIALS TFFALNAAVSALIARRQGEGKRDKANVTLTTALYIMVFFVILVDLVMVPFAGKILELAGS NSETHKLAYDYYIIIMLGLVFNALSMLINAGHRGCGNTRIAFISNLVSSVVNICLNYLLI NGRFGFPKMGVRGAALATVLGTVVATVMCIISLFSKTSYMNFLTMAKNKFKFSLEIAGEI RNLAVNLFVENISARIGFMITAMTAARLGTEAFAAHNVGMNLLSLSFSFGDGMQTAAIAL TGNALGANHKDEALKLGKSCQELGFIFSVIISLILIFFGRDIFSIFFDKNNILDMGVLIS RFLTIIVLLQISQVIYGGCLRAAGDVKYTLGVALVSVTFIRSIVTLICVNVLNLGLAGIW VGILSDQASRFISLRHRFNLGEWVHKKI >gi|229269865|gb|GG666046.1| GENE 203 229074 - 229832 933 252 aa, chain - ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 1 219 5 246 290 100 28.0 4e-21 MKNVLILNDFVSKGKIAARLMAPVLSYMDCEVFLLPTAMIANNFSLGGNAFFNIDPFIKE SLINWTNLGIKFDLIFMGYIEDESQKEMIKDFIKSLDYKTTIVFDPIMGDDGSLYQGLDE SKIENYKDLIEVADILIPNETEAKFLDLDIKKLTENGKKIIITSANTNDKSSIIYNDGRQ TIIPYEKLDLKVGGTGDLFDGLFIGYLLKDFKMIEAINQTSKDIIKILLANERENPGARE INIERYLTLIEC >gi|229269865|gb|GG666046.1| GENE 204 229919 - 231517 1403 532 aa, chain + ## HITS:1 COG:SPy1212 KEGG:ns NR:ns ## COG: SPy1212 COG1502 # Protein_GI_number: 15675176 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Streptococcus pyogenes M1 GAS # 8 532 2 525 525 390 40.0 1e-108 MKDYKKNVVNKIKENKYVKKTKKGLGSLIFSRAGLFAFLILAQIFILVGLYRYFGINQYY LFGGSSILSIIMLMVILNINDMNPYMKLSWALFIIVAPTFAIIAFWMSYFKIGYRSEHKR VLDLERESRIYHQRSLSKKELMATEDKRFINLATYLKYIGGFSAYKSSKSQYYKLGDTMF DAMLEDIKNAKDFIFMEFFILDYGYMWGSILELLVEKVNQGVEVRLLIDGSNLITRLHSN FEEEMEEFGIKFRVFSKMYPIVSTYLNNRDHRKVMVIDGKVGYTGGINIADEYINRYERF GHWKDCGLRVEGEAVESLTVLFLTMWNASKKNEVDEDFSPYLEYVTAKEEDGYYIPFADN PTDDERLCKNIYLDMVNNARDYVYAMTPYFIVDDEVISALQSAAKKGVDVRLGIPHIPDK KVAFTLAKNHYPELLKYGVKIYEYTPGFVHSKTWLADGNIGVVGTINLDYRALYQNFECG VLVYKSKSLVTIKEDFDEFFKASKLVTDEDLENMKTSTKIAGKLLKPFAPLM >gi|229269865|gb|GG666046.1| GENE 205 231774 - 232148 481 124 aa, chain + ## HITS:1 COG:BS_ytrA KEGG:ns NR:ns ## COG: BS_ytrA COG1725 # Protein_GI_number: 16080098 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 1 121 1 123 130 68 34.0 3e-12 MFKLDANSETPLYMQIVEQTKVAIAAGYLQNGDKFPSVRELSKELLINQTTVSKAFKELS SQGIIKTQPGIGTVIELNSEKIDIKRDEFIDKLEEDLSQAIFLKISKEEIIELYEKVEGE IDVI >gi|229269865|gb|GG666046.1| GENE 206 232138 - 233001 955 287 aa, chain + ## HITS:1 COG:lin2912 KEGG:ns NR:ns ## COG: lin2912 COG1131 # Protein_GI_number: 16801971 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Listeria innocua # 4 279 2 281 295 136 32.0 4e-32 MLFEVNNISKAFGKNQVLKDVSFVLRPGTITGIVGRNGSGKTTLLKILCGIYLAEAGVFT LDKKKLSENPKLIKHIGFLPDRFDYFSFYKAKDLPEFYKISYEDFDSDYFFTEINKNEID PNQNIRNLSKGQKNLLGLITILASKADILLVDEVLDGMDVLNKKLILSYILDAKEEGRTV LASSHDLDHLTGVCEEILYLSKDGRLKNTSVDTKNIRKVQVVVKDKLPQALADNSVLVSS LGRVKVILIKASDKLLSEYLSDDEIVQYDMLDLKIEDYFYMEQGGEI >gi|229269865|gb|GG666046.1| GENE 207 232998 - 234230 1095 410 aa, chain + ## HITS:1 COG:no KEGG:Apre_0432 NR:ns ## KEGG: Apre_0432 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 410 1 413 413 204 32.0 5e-51 MKDFRKLLKLTWKRYAIWLVLVGFFFTLSNTLGVKSNLKWDAFRVTDNVRQMEKNLGEEK THPDDQKIDEKYLKEAEKTAEAFAKKYKLRYRKERSYDEGYMEKLNKDDLWEKQSTYEEF MRSMENLDSYKLDMTERLTSSMALSLVFIMIISMGLTSIEESLNYYDFTRMLPWSKKREF LMKIGVALVFGIALFIINILMVSITIKGSVFSEIANFAKMGTFLMKSMISMVSASLVGVS LGLLAGNFLGHIGLGIIAIGFIEWFKLIIFSFLGIFGGSYPGTFNDAYYNFKNTLSPAQQ VFLSLINANFDKTSSLWAGLVVALIIAVGTYFLIGRSSAERSGYMVKNRVLSEICKWSGI LSLTSILFVIISSFISFDGASIILRIFAYALSLLISYKLFDILFKIRLKF >gi|229269865|gb|GG666046.1| GENE 208 234241 - 234684 616 147 aa, chain + ## HITS:1 COG:SPy1823 KEGG:ns NR:ns ## COG: SPy1823 COG2131 # Protein_GI_number: 15675651 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidylate deaminase # Organism: Streptococcus pyogenes M1 GAS # 4 141 3 139 153 174 57.0 6e-44 MAKDRLTWDEYFMRLAETVAMRGTCDRAYVGCVLVNSENRIVSTGYNGSIKGNAHCDEIG HTMRDGHCIATIHAEMNALLYCAKEGIAVNNCICYVTHFPCLNCTKSLIQAGIKKIYYRN AYRVDDYAVELLEKNGIEYIKIEEKDQ >gi|229269865|gb|GG666046.1| GENE 209 234681 - 235367 753 228 aa, chain + ## HITS:1 COG:no KEGG:Apre_0434 NR:ns ## KEGG: Apre_0434 # Name: not_defined # Def: HAD-superfamily hydrolase, subfamily IIB # Organism: A.prevotii # Pathway: not_defined # 2 224 3 226 230 210 52.0 3e-53 MILTADFDGTIFIDEKISAKDIGAIRDFQASGNLFAIVTGRSFASLTPLIEERINPDALI CNNGGHIFVKDKNELREVFKAEIHPDKAREFLNFYGKEIPNQMAIFTESVKENDLKNINE SIMALAIYSDDEIVNHFPEDFDFHYSIGVIDVVKKGINKQRGIDFIKDYYSFDEEIIAIG DDYNDIDFLKNTPLSYTLNYVTNEDVREVCNFSVKSVADLIENLMEGI >gi|229269865|gb|GG666046.1| GENE 210 235364 - 236131 1036 255 aa, chain + ## HITS:1 COG:SPy1869 KEGG:ns NR:ns ## COG: SPy1869 COG2820 # Protein_GI_number: 15675688 # Func_class: F Nucleotide transport and metabolism # Function: Uridine phosphorylase # Organism: Streptococcus pyogenes M1 GAS # 7 255 9 257 259 347 69.0 1e-95 MKYSDDGRQYHIGLKAEDIGKYVILPGDPKRCEKIAAYFENPKKVGDRREFVTYTGFLNG EKVSVTSTGIGGPSAAIALTELSKLGAHTFVRVGTCGGIDTDVKSGEIVIAQAAIRAEGT SKEYAPIEFPAVADFEVTTALKKASESLGAKSHIGVVQCKDSFYGQHEPDLMPTSYDLNN KWEAWKRLGTLASEMESAALFTVARFLKVRVGSCFLVVANQEREKEGLANPVVHDTDLAI RVGITALKNLIEAGK >gi|229269865|gb|GG666046.1| GENE 211 236148 - 236642 231 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486319|ref|ZP_03916635.1| ## NR: gi|227486319|ref|ZP_03916635.1| hypothetical protein HMPREF0072_1722 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1722 [Anaerococcus lactolyticus ATCC 51172] # 1 164 1 164 164 263 100.0 3e-69 MIRNLQNINYWKETIKENEDFSVKLLSKDLIRGNKFLASLVNTNENTELLCVEILINNKN EVVSYFKGVFKKDILNVNLIKNDNIIKIFDFISSVSVKANVILSMVYLDDTEEKFFNMRS GDKMLMLNSKYYTNEGIFGNLQEITRVDSFEFFEGGRLEELLTS >gi|229269865|gb|GG666046.1| GENE 212 236620 - 237336 480 238 aa, chain + ## HITS:1 COG:BS_yvoA KEGG:ns NR:ns ## COG: BS_yvoA COG2188 # Protein_GI_number: 16080556 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 5 175 11 177 243 79 29.0 4e-15 MKSCLHHKVEEYILSEIKNRHLKPGMKILSERKLAEKFNLSRMTVKYAIDKLVESRILIR VQGKGTYISNNLNYNGRIMLSKDNPISMKHENIVLGKTCTDYVQSFKLLYDRDDLNSIFK KYKDFYQLVRIRFADESTYGIEYCYFPFEIFKDAIRYDFSKISIYDYMSYKKNIPNNFVT KIEVVRDPNINAILNLDTDSYTYKVRFYGINKDKNLVEYTISYMKMDKVEFKIRYDFN >gi|229269865|gb|GG666046.1| GENE 213 237488 - 238543 813 351 aa, chain + ## HITS:1 COG:lin0034 KEGG:ns NR:ns ## COG: lin0034 COG0449 # Protein_GI_number: 16799113 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Listeria innocua # 1 351 1 356 361 117 25.0 2e-26 MEKTMLDYINSIPDLVKKNLFDPALTDKFIDLYKENGKGLVLVASGSSFNACMSVKYALR DLLGKNVEVFTAHTFKYYELDRFKDDFIVVVSQGGKSTNCISLVDSLVEKNIKMAVLTSN VESEIGKHSDKVFDYGIGNETVGYVTRGYVGLIVFFLNFAINYSRKTLSDGFIESLQKDC EQAQIIFDSIVSQAKEIYDKNIKEMLSSKIVHVVSSGDCLGLAREASLKISETTKIPAMY FEAEEYLHGPNLQLTPDYSVAIIDNLDETSDRIKELYKALGLVTDRCYFITGKKDDYKNC IHYDYENKLSRLIYSIVPFQLFSYYVTNTMKSWDSHSLMEKFDDLIVSKAK >gi|229269865|gb|GG666046.1| GENE 214 238564 - 239583 1138 339 aa, chain + ## HITS:1 COG:STM4540 KEGG:ns NR:ns ## COG: STM4540 COG2222 # Protein_GI_number: 16767784 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Salmonella typhimurium LT2 # 7 339 11 343 343 239 37.0 6e-63 MGKIYNFDTEKYLEDGVTSYQKREDVEKLAVEIAKEGFDNIYLMGIGGTEFEFYHLYYML DKYFDVDISLISAADYFLKKDKKLTEKSLVVTASSSGNTVELIKAVKEFKKRGVRVVSFT KLDSELAKYSTHVVEEAAVTGKVEFSYLLQTIFLYKILNEIGQFDDYNEFADQLKGIFKD LVGIRETFDKRADFIASKIYDAEHTIFTASGALWGECLLYSMCILEEMQWIRTRPVTSSL FFHGTLELVEENVPVFIIKGEDEFREQDNRVENFCKKINAEHYVFDTQEFALNSIDDKFR KFLTPWIATALLTERMGRNYAKYTNHNLEYRRYYRQFEY >gi|229269865|gb|GG666046.1| GENE 215 239595 - 240008 611 137 aa, chain + ## HITS:1 COG:STM4535 KEGG:ns NR:ns ## COG: STM4535 COG2893 # Protein_GI_number: 16767779 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Salmonella typhimurium LT2 # 4 134 6 140 140 68 32.0 4e-12 MKVLLVSHAYMAKGVKSSVELILGPQENLYAMSAYVDQDIPFEKEIKDFLSENTNEKIVI LTDLLGGSVNNEILQLVANMENVILVTGMNLIMVMSVLLTTDDTIDEQIDDIIDGSKNGI LRCSQVDIESDADLDDF >gi|229269865|gb|GG666046.1| GENE 216 240018 - 240485 519 155 aa, chain + ## HITS:1 COG:STM4536 KEGG:ns NR:ns ## COG: STM4536 COG3444 # Protein_GI_number: 16767780 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Salmonella typhimurium LT2 # 1 148 1 149 153 141 49.0 4e-34 MIKLLRIDHRLLHGQVAFSWSQALNANAILLANDALVHDKLRQNVIKFSKPAGVKVIAKS LEDSVAAIKSGVTDKYNLFIIVESIEDCEKLVNALDIKEVNLGGTYPHEGYEKLEVAVYA NEEDKNILRRMIANGVDVYIQGVPSSNRVNVKDII >gi|229269865|gb|GG666046.1| GENE 217 240496 - 241287 986 263 aa, chain + ## HITS:1 COG:STM4537 KEGG:ns NR:ns ## COG: STM4537 COG3715 # Protein_GI_number: 16767781 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Salmonella typhimurium LT2 # 4 237 3 233 259 187 49.0 2e-47 MLREAILLALIMLLGRSEFFLGTALIQRPIVIGPLVGLVFGDLHTGLVMGATLELAFIGA VSIGSYIPPDMLSGTVLGVAFAIKAGSGPETALTLGMPIASLMLALRTIVGSPLLVALGH LADKHVADGKYKMFTFDVLVVPFLVEIMTSSLVPIAYYFGSDAVTSALGGIPEFITTGIE IATGMLPALGFAMLAQMIMNKKVAPYFFLGYFLLAYFSKSGLTTTGIAIFSIIMAAIGFF KQDEVKEVNLTDSEQEGYVLDEF >gi|229269865|gb|GG666046.1| GENE 218 241277 - 242113 632 278 aa, chain + ## HITS:1 COG:lin2108 KEGG:ns NR:ns ## COG: lin2108 COG3716 # Protein_GI_number: 16801174 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Listeria innocua # 5 276 2 272 273 268 51.0 8e-72 MNFNKIKNQNSIITKKDLANLGLRTLPMEHSWNYERMMHMGYAWALMPILKKLYPEDEKF REALTRHLEFYNTTPFIISFPLGISAAMEEERANNIDTFDTKSISDVKTALMGPLAGIGD SIFWGTLRIIATGIGTSLSLQGNLLGPILFLLAWNIPSWICRYVLSFVGFNLGTEVITQA NEQGIMEKLTKAASIVGLAVAGAMTSEMVNVNIGISIGSGDAATTIQEILDGIIPGIPTL LVFWLSWVLLKKKINPLIIMLIMLVVGLIGSYTGILAA >gi|229269865|gb|GG666046.1| GENE 219 242190 - 242852 786 220 aa, chain + ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 188 5 189 215 89 31.0 7e-18 MKSLIFDVDGTILDSMPMWLELENNILKKYGHTMDSLDKDTKDTIESLSIEGMSKFIAET IATDMTFEEVFNYFQSLIDYKYANEVDAKAGSVDKIKYLKAKGFKLAVASSSSSDCIIKA FKRLGIYECFDIIATADNTGLRKSEDEFWKSLIEKLGKDKNQVILYDDAIYAITQAKKLG IEVVGIKDFPWNEKDWEKIQQTADYTLDGICDISLDQIMQ >gi|229269865|gb|GG666046.1| GENE 220 243091 - 245004 1812 637 aa, chain + ## HITS:1 COG:no KEGG:Apre_0739 NR:ns ## KEGG: Apre_0739 # Name: not_defined # Def: YSIRK gram-positive signal peptide # Organism: A.prevotii # Pathway: not_defined # 335 516 739 924 2035 103 37.0 3e-20 MKRKSHKIIKACALGLSLLLIGGLGANILPKTYAEEQRQESNQEKRIINVHFNVGNQGYK IHYWHDGDANGQTHDFDGTDEYGPYININVKNDKTKLNFIIAKIEGNNWGEREYKGNVDG HRTIDLTKKDISQIWVEAGKEKYKLEGPSKPKVDDKIDWAEKINELINKIDDLKLSPGEK ANLAIKLYEIKDSQGKRTEEDYKKAEEIFNQKAKEVENNNPGSGKVEISKEPTVEKITKD STKIKGIGVPGAKIEIYYGFSENDMTHVNTKAITVDKDGNWSIDKPAYMGIQLGEIIWVS QIEEGKKPNKVLAKIENIPTSDFIKDKIRDIRAKDIRIWKGDTINWHEAYEIQGQADDDK YKFINDELRLAIKKDIDKRSSESKGEFKGKLEFTFRDGSKLKLDNTLYVFDNVEGPNENT PADAITIEMKLGIGARAKDNPKKIGNEENPVVYETYKVKPGTDIKKYKVEILKDTILNKI PLEPIEGYENPVWTSQNGTDFKVDKNNRVFTAKAVKKSENKKPNQPEQPNPEKKPEDKPK QKESKSRSYYNRLLAGAFQMPKQKTSKVTQDQYDRLRKAYMENKIMVKSAKFLLENAPNT IKPVKAKLERQVKNAEAIIARTEKILKKLDETGLYTK >gi|229269865|gb|GG666046.1| GENE 221 245171 - 245554 387 127 aa, chain + ## HITS:1 COG:SA1748 KEGG:ns NR:ns ## COG: SA1748 COG1725 # Protein_GI_number: 15927508 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 122 1 122 126 94 42.0 5e-20 MKIIIKNGSAVPIYEQIKNAIRDEVLKGNLKAGEKLPSVRNLARELSISILTVKKAYDEL ESEGFIESRQGLGTFVGKEDPNLRLEEKQKKLEEALIEAVRISKDIEMKKNDLFELLEYL YEGDFND >gi|229269865|gb|GG666046.1| GENE 222 245547 - 246383 937 278 aa, chain + ## HITS:1 COG:CAP0090 KEGG:ns NR:ns ## COG: CAP0090 COG1131 # Protein_GI_number: 15004794 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 3 274 4 278 282 187 41.0 2e-47 MTDKILAKNLVKTYEKFKLGPNDFAIKKGFVTGFIGKNGMGKTTTIKALLSLINYDGEIF IDGKKIEDLTYLQDVGLVMDDSFLGKDWTLDLVDQAMAIGYDKWDAKTYYEYLDKFELER EKKVCELSRGMKIKLMLAVALSHDAKILILDEPTSGLDPAMRDELVDMILDFMEDPAHTV LFSTHITQDLDRIADYIVFIDQGKIVFEGSKDEFYDKFLLIKGGLDDFDKIKSYKIYGQK KTKVNFEALVLREDYKEDADVVAEVPTIDQIMIYYGRI >gi|229269865|gb|GG666046.1| GENE 223 246383 - 247033 336 216 aa, chain + ## HITS:1 COG:no KEGG:Celf_0281 NR:ns ## KEGG: Celf_0281 # Name: not_defined # Def: hypothetical protein # Organism: C.fimi # Pathway: not_defined # 7 209 8 214 220 68 20.0 2e-10 MDIRKQIKLDIISMKPYYTLKNLIIILGIFLYNSFINKSPIGLVPMILFFAVMYSSNPFL LGENSGIDAIYKIFSINSTKVVIGRYILACLIFMVASLVGFSIYAIVYQIKNMPMGIDML MFIGSNFVLYAIVISVQYPIYFKYGYAKARIFCFLPIFIIAVIGMALGYFIKDFGPIINF VLEKQRMLIIGLCILIVLFLTISITLSIKFYKKRDF >gi|229269865|gb|GG666046.1| GENE 224 247263 - 248195 1333 310 aa, chain - ## HITS:1 COG:lin2430 KEGG:ns NR:ns ## COG: lin2430 COG1105 # Protein_GI_number: 16801492 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Listeria innocua # 1 309 1 303 307 231 44.0 1e-60 MIYTVTLNPSIDLYVEVDKLNPGFNSNIKTERTLPGGKAINVSRILSQLKIPTTATGFLG SYQGLFIKDWLEKEEILADFVDIKQSNRINIKIFENKKETVINFQGPTISSEEVEELLYY LSRVREGDTIIFGGSVPPMENGEDSDIYDRMVEIAKANGAYFIADVPSQYLMNMVEKSPL LVKPNGEDIESIYKVKIKDKMEYIPYGKDLIKKGAKYVIISYGKDGSMFFTRDGVYAANP VNDDKEIVNTVACRDAMIAGFVGTLVRDNDPIESYMVAVAAASATAKVLDLPTREEILEI LPLVDIEIIE >gi|229269865|gb|GG666046.1| GENE 225 248207 - 249607 1624 466 aa, chain - ## HITS:1 COG:BS_murF KEGG:ns NR:ns ## COG: BS_murF COG0770 # Protein_GI_number: 16077524 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Bacillus subtilis # 8 461 1 451 457 308 36.0 1e-83 MALGDLKMIEKTLSEIAHMINGEISDEKFSAIKIKGVSTDSRTIDPGELYIPLVGEVFDG RIFIKECEDKGAEAFIIDDPTKINKTVSIPYVRVADTKKALQDLATAYRKELSCKVIGIT GSNGKTTTKDLLYKILSEKYKTQKTCGNLNNEIGVPKTVLSLDPDTEVAIIELGTDNFGD ISLTSRMVKPHIAMITNIGDAHLHNLKTRSGILKAKLEILEGMEDDGIFIYNIDDPTMKE EIPTYDIKQKVLSFGRSDKADFKIVFEKSPTSIIRFSHENDHFEVPLMGEHNIYNAAAVV MISEMLGLNKEMIDAGFMEVKSSQNRTELLECDGFDILDDSYKSNPQSLLAGLETTYMLE GYKRKIVCLADMLELGENEVDLHREVGKKLDSKKIDYALFYGPLAKQMYEASLENFPADR TFYFNHKDELIEKLKSLVIGASLIFVKGSHGMHMEEIIESIKNFNI >gi|229269865|gb|GG666046.1| GENE 226 249579 - 250622 1190 347 aa, chain - ## HITS:1 COG:BS_ddlA KEGG:ns NR:ns ## COG: BS_ddlA COG1181 # Protein_GI_number: 16077523 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Bacillus subtilis # 9 338 3 338 354 194 34.0 2e-49 MKTVYILCGGPSSEHDIALRSALNIVKNLNKDKYEKKIVYIDKEGKFSPTFKDFDPADEF SLVKKIDKSTQASIADFLLEVSKEDLENTIILPVVHGTYGEDGTIQGFLDAVGLKYIGNG LLSSAICMDKVTSNDIFEKSKLRQAKYKYCYKEDFDDDFMDSCIAYVGLPLIVKPSANGS SVGVSRVENKKDFKKAGLEALKYDRKLLVEELIIGQEIELAVLGDSDNIDVSDPAAYITD HVFLDWDAKYFSKSTREELPYKMDENDKQKAKDFARACYKAAGCEGFARVDIFYGNDRQF YINEINTFPGFTPSSFFARMAMNLYDVDFSSILDKLIDDGFRRSKND >gi|229269865|gb|GG666046.1| GENE 227 251083 - 251892 1184 269 aa, chain + ## HITS:1 COG:no KEGG:Apre_0438 NR:ns ## KEGG: Apre_0438 # Name: not_defined # Def: SH3 type 3 domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 269 1 289 289 270 55.0 6e-71 MKFITKYALAAALVIPSVFAFGSHKAEAASAVINKDLANGVNVRSEAKLGDNIIGLIDDE DSQYEIKDKKDGWLLIDFEGKDAYVSADLFHLLEETELVSATNFRKEASLDSEIIEVLDK GTAAKALEIADNGFVKVEIDGKVGYVYNNLLKTFREKNEKVKAQKVQEQKAQAKKAQAAK KQAPAKNTNQSYKGSTNWAKEWIAQRESGGSYTAYNPRGGYYGRYQLNPSLVRYGASPAE QEAAADNYVAQRYGSWENAQAFWQRNGWY >gi|229269865|gb|GG666046.1| GENE 228 251840 - 252010 94 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486336|ref|ZP_03916652.1| ## NR: gi|227486336|ref|ZP_03916652.1| hypothetical protein HMPREF0072_1739 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1739 [Anaerococcus lactolyticus ATCC 51172] # 6 56 1 51 51 82 100.0 1e-14 MAHGKMLKHSGKETVGTRILKLSLTGLFLVGKLSFYLYENGESIQEAKNLSFILII >gi|229269865|gb|GG666046.1| GENE 229 252044 - 252313 341 89 aa, chain + ## HITS:1 COG:MK1213 KEGG:ns NR:ns ## COG: MK1213 COG3830 # Protein_GI_number: 20094649 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanopyrus kandleri AV19 # 2 89 3 90 90 70 34.0 8e-13 MKAILTIIGKDRPGIIYQVTEILYNYNINILDMSQTIMEDKFVAMINIDLTKANADFGKI TASFDDLSKQTKLEIRIQNEEVFDVMHRI >gi|229269865|gb|GG666046.1| GENE 230 252315 - 253664 1530 449 aa, chain + ## HITS:1 COG:NMB1652 KEGG:ns NR:ns ## COG: NMB1652 COG2848 # Protein_GI_number: 15677501 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis MC58 # 1 449 3 451 451 538 64.0 1e-153 MDKANILETIKMLDEENLDIRTLTMGVSLLDCIDPDYIKACDKIYDKLIRESKDFLKVSK EISQIYGVPIVNNRIAVTPISLIAAATDLDDYTPFAKTLDKAAKDIGIDFIGGFSALVEK GMTPADEILIKSIPRALAETDLVCASINIGSTKAGINMDATDLCGKTIKELAANTENAFG CAKLVVFANAVEDNPFMAGAFHGVGEADTVISVGISGPGVVKAAISGKENLKINEIYEII KKTAFKITRMGELICQEVCKKLDKNFGIVDLSLAPTPAIGDSVGRILQEIGIDKVGGHGT IAALAMLNDAVKKGGIMASSRVGGLSGAFIPVSEDEAMIEAAGKGWISFDKLEAMTCVCS VGLDMIAIPGKTTAASISAMIADEAALGVINNKTTAVRLIPVPGKDVGDQVEFGGLLGYA PIIDVGESDSSIMISRGGYIPAPVHSFKN >gi|229269865|gb|GG666046.1| GENE 231 253674 - 254198 819 174 aa, chain + ## HITS:1 COG:CAC2769 KEGG:ns NR:ns ## COG: CAC2769 COG0652 # Protein_GI_number: 15896024 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Clostridium acetobutylicum # 4 171 2 169 174 239 70.0 3e-63 MTDKNPIVTFMMENGDVIKAELYPDLAPNTVNNFISLIKKGFYDGLIFHRVIKNFMIQGG DPEGTGMGGPGYAIKGEFNQNGFKNDLKHERGVLSMARSFMLDSAGSQFFIMHKDSPHLD GEYAGFGKVIEGIDVVDKIAETKTDRQDRPKEDVRIKKASVETFGKEYPEVVKM >gi|229269865|gb|GG666046.1| GENE 232 254238 - 254669 675 143 aa, chain - ## HITS:1 COG:SP0321 KEGG:ns NR:ns ## COG: SP0321 COG2893 # Protein_GI_number: 15900253 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 5 103 3 99 144 58 33.0 5e-09 MANAVIAVSHASLASGVYSAIKMIAGEFDNVRVEEFKDNDSLEAFDQKLLVDYEELTKNY KNIFILADLAGGTPFNRSVMTLGDRENVRVIGGLNFASLYTAINSDSDDIDAGVEDIIQT AKESLIVFETKKEEVDDFEEDGI >gi|229269865|gb|GG666046.1| GENE 233 254669 - 255661 1075 330 aa, chain - ## HITS:1 COG:ECs4013 KEGG:ns NR:ns ## COG: ECs4013 COG3716 # Protein_GI_number: 15833267 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Escherichia coli O157:H7 # 4 241 23 258 292 235 45.0 7e-62 MEYNDMQYKDLNPSPHLDQKTLNKMVWRSLFLQASFNYERMQAAGWLYSILPGLEKIHTD KEDLAKSMEHNLEFFNTHPFLINFVMGIILSLEQNKVDIPTIRAVRVAAMGPLGGIGDAL FWFTLVPIVAGISSNMALQGNFAGPILFLVVFNIFQFAIRYWLMNWSYKMGESAIDMLTA NAREFTRAASILGVIVVGALVSVYGSTEIALKVDNGTTQAPVPIQTIVDNAELPDYASYL YVDGNKDKMADGAAVKDLGNGKSQISFTTYEEQPVQIDIQKVLDGIIPDLVPLAITLLLY WLLAKKKWTPIYCIMLLLAMGVVGSYIGLF >gi|229269865|gb|GG666046.1| GENE 234 255651 - 256448 1165 265 aa, chain - ## HITS:1 COG:ECs4012 KEGG:ns NR:ns ## COG: ECs4012 COG3715 # Protein_GI_number: 15833266 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Escherichia coli O157:H7 # 1 216 1 216 259 172 41.0 7e-43 MNINILQVILIFIVTFVAAIDQFSFLESLYQPIVTGPIVGWILGDAHTGLIVGASYQLMT IGNMPVGGAQPPNAVVGGIVAVIFAITSGLEPNAAVAAAIPFALLGQYGVTLIFTLMAPV MSKADQYAKEANPKGIEKINYLSMIALGTIFGLIVVFFFIAGSTFGTELTSKIPETFMHG LSVAGGMMKYVGFAVLLRLMISRDLWGFFFVGFALAVIVMANASLSGAALLLIAAIGFAI AFWDYQINTKMKSTVVVETGEEDGI >gi|229269865|gb|GG666046.1| GENE 235 256465 - 256941 644 158 aa, chain - ## HITS:1 COG:agaV KEGG:ns NR:ns ## COG: agaV COG3444 # Protein_GI_number: 16131025 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Escherichia coli K12 # 1 157 13 169 169 188 56.0 3e-48 MPNILLTRIDNRLLHGQVATQWTKHIGANLILVANDDVAEKKMRQNLMDMAAPTGVATRY WSLQKTIDTIHKAADRQKIFIICESPEDVLTLVEGGVPIKDVNIGNMHMAEGKRQVAGVV AVDDKDVEAFKKLRDLGVNLEIRKVPTESAEDINKLFS >gi|229269865|gb|GG666046.1| GENE 236 256951 - 257226 441 91 aa, chain - ## HITS:1 COG:no KEGG:Corgl_0404 NR:ns ## KEGG: Corgl_0404 # Name: not_defined # Def: YajC family protein # Organism: C.glomerans # Pathway: not_defined # 5 89 8 92 95 65 34.0 5e-10 MPAEIARTSLVLLVFIAIFGVISQILSHISLKKKKKYFEKLHKDLKPGKEVMLTGGIYGK IVSLNEETAIINVAKDVNMKVSRYSISEIIS >gi|229269865|gb|GG666046.1| GENE 237 257700 - 258830 1359 376 aa, chain + ## HITS:1 COG:SPy0716 KEGG:ns NR:ns ## COG: SPy0716 COG2222 # Protein_GI_number: 15674774 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted phosphosugar isomerases # Organism: Streptococcus pyogenes M1 GAS # 16 375 17 389 399 336 48.0 5e-92 MLLDVNKLEERDFKNTYTEIFAQADTWEEVYGLYEERKAEIEKFLGNFDKDTKVIFTGAG TSEYVGNIAQDYLKTHGDFDFESIATTDLVSAPYLHFKKDQKTLLVSFARSGNSPESVAA VKLGEQIVDDFYNLPITCAHDGKLAVNLKDDPKSYVFLNPAITNDKGFAMTNSFSSMLLA ALLIFDTSLDNKKEIVENLSAIARETYKRADEIENLINFDFDRVAYLGSGPLGKLTKEAR LKILELTAGEVVTIFDSSMGFRHGPKSFVNDKCLVVSFISSNDYTRQYDLDILDEIKADG IAPKIIGVTNEDVDRDYQFVLKSQGLRDAYLAVAYVVIAQLISLITSLRVGNTPDNPSKS HTVNRVVKGVTIHDYK >gi|229269865|gb|GG666046.1| GENE 238 258830 - 259531 742 233 aa, chain + ## HITS:1 COG:SPy0715 KEGG:ns NR:ns ## COG: SPy0715 COG2188 # Protein_GI_number: 15674773 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 4 233 7 239 240 132 37.0 7e-31 MVSLYSDLIDKLLEQISTMDKGAKLPSERQLCQDYEVSRTTVRNALGSLVSSGVLYQIQG KGTFVRERNRENLSNYYSFTEQTKRNGKTPKSIVVSFNIRELNDKERHVFDDETLEKVIV FDRLRLADDTPMMYERTAIPYEGFEKITKDLLEEVALYDIFDNCFSTKIANVRERFQVSS LTKKVAEALNLKDGSAALKITRFSYDREDRLIEYTVSYARGDMFYYETSYSPN >gi|229269865|gb|GG666046.1| GENE 239 259698 - 261605 1877 635 aa, chain - ## HITS:1 COG:CAC1572 KEGG:ns NR:ns ## COG: CAC1572 COG3855 # Protein_GI_number: 15894850 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 5 618 18 643 665 504 43.0 1e-142 MDKTYQSLIKGLYPDKNSIIDELILLNAQQKLPKGTEYFFSDIHGESDAFLHLLRSASGN IRDKIQKLFGDTLEKKDQDALAQLIYDPDLVYKSLKTEEKISKDYLTITIHRLISLLKFV STKYPKDYVKRKFPQKYNLILDELLYTNDSEYNKRAYYESLVTNIVKYEVAFDFIKVICT LIQRISVDKLHIVGDIYDRGPSPHIIMDELLTFPSVDFQWGNHDIAWMGACSGNTALIAA CVADAIKYNNFDMLEDGYGINLRVLFEFAMETYGDDPCTCFTPRIYDYNIYDNITTEAAA KMYKAISMIRFKLDYALIERNPDMKMEERNVLKFIDFNNYTYKNAKLKDKNFPTIDPKNP AKLTKEEENVIQVLKQDFIKNDKLNKHMDFLYKNGAMYRVENGSLLFHGCIPLTADGDFQ EVELNGKIYKGKSLMDYFEKIARDAYYTKDKKAKDMMWYLISGRYSPIFGKSQYSYFENI FVDDKKLKKEEPNPYYDLCEKEEIVDKILDEFKVEGNRRRIVNGHVPVITEAGESPIKAN GKLYVIDGGISKPYQAKTGIAGYTLVFNSHHVALAEHKSYESITNKVSSYTPNIKEVEVM NPRMLRKDTDKGKAKEKKIKILEELLDLYDEREDW >gi|229269865|gb|GG666046.1| GENE 240 261679 - 262545 958 288 aa, chain - ## HITS:1 COG:no KEGG:Apre_0444 NR:ns ## KEGG: Apre_0444 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 142 1 142 247 99 42.0 2e-19 MKDFIKFFSIITGLFRSIISILLLFAIGFVVFVDNHLFLATVDLLGINNISSAIIKPLAL GVLILAFVINTAIARSIFKAGDKGDGHLANVFFGLLFLGCDALLYIYFREKLLYILLGLN GLIVLNSLIGLISRFKGVYNTGLSEKKTEYIEVKTGPSDVESSDNPIKLDFKEDEDVKII KKDDTSVDGKTVIMTSQLIKEDTELDTMSAKDFENDDLKTQAEKEAEEKLANESPRTLGD VEEEKKMNKAVDDLGDENLTYDPNIAEDFKKKEEAKIYNKSDFVKDED >gi|229269865|gb|GG666046.1| GENE 241 263009 - 266689 4603 1226 aa, chain + ## HITS:1 COG:CAC3143 KEGG:ns NR:ns ## COG: CAC3143 COG0085 # Protein_GI_number: 15896392 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta subunit/140 kD subunit # Organism: Clostridium acetobutylicum # 5 1187 3 1174 1241 1496 64.0 0 MAQYHKKLYGKTERMSFSKFPEVLDLPNLLKVQKDSYEWFIKEGLGEILEDISPIEDYNG KLSLEFTGFEFEEEPKYSLKEAKYKDLTYARDLKVMAILFNKETGEIKRQEVFMGDFPMM TDSATFVINGAERVIVSQLVRSPGVYYAEETDKSGDKQYSSTVIPNRGAWIEFDTDASHT VNVRLDRTRKLPATTLVRALLFDTDEEIIKALGDTPHLRNTLEKENSENSEEALIEIYRK LKPGDPASLESATTLINNLLFDDRRYDLARVGRYKYNLKLALAPRIAGEIAAEDIVDTET GEIFVKAGEVISEDIAKAIENSGIVSVDIRKLNSEEEEIVLRIVGNNFVDIHAFERLEGL DIDFDEFSEKVYYPVMTEIIDEAETDEELIKMMQKRKKELSPKHITKSDILAVVNYQFNL FEGVGDTDDIDHLGNRRVRGVGELLQNQFRVGLARMERVVRERMTTQDPDIATPQGLINI KPVTAVIKEFFGSSQLSQFMDQTNPMSELTHKRRLSALGPGGLSRDRAGVEVRDVHDSHY GRICPIETPEGPNIGLITSLTTYARINKYGFIETPYRVVKEGGVVTDEIDYLTADIEDDY IIAQANEPLDENNRFVNERVSGRGYRGENDIYPRDSIQYMDVSPQQIVSVGASLIPFLEN DDSTRALMGANMQRQAVPLIKSQAPIVATGIEHRAAKDSGVCVVSKTDGKVVYVAADKIK VKTPKGEVITYELLKFERANQGTTINQRPIVKLDEDVKEGQVLADGPSTDNGELALGKNI LIAFTTWEGYNFEDAMLLNEELVINDVLTSVHIEEHECEARETKLGAEEITKDIPNVGDD MKKDLDENGVIRIGAEVASGDILVGKVSPKGETELSPEERLLRAIFGEKAREVRDTSLKV PHGEKGIVVDVKEYNKKDGDELSPGVNKVIRVYVATKRKIMVGDKMCGRHGNKGVVSRIL PREDMPFLPDGTPIQICLNPLGIPSRMNLGQVLEVHMGLAARTLGWKIATPVFDGAMDTE IEDVLEEAKKVAPFVNKTGKIRLRDGRTGLEFQNPVTVGVMYMLKLHHMVEEKIHARSIG PYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASHTLQEILTVKSDDVTGRVKTYESIV KGENIPEPGTPESFKVLVKELQSLALDVELLDEDGQVVELKENIDDQDRFSQVEKIDASK IRNQSKLLAKANAPKEDGEAEEVSEA >gi|229269865|gb|GG666046.1| GENE 242 266704 - 270261 4306 1185 aa, chain + ## HITS:1 COG:CAC3142 KEGG:ns NR:ns ## COG: CAC3142 COG0086 # Protein_GI_number: 15896391 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Clostridium acetobutylicum # 3 1158 2 1161 1182 1467 63.0 0 MSELNQFYGMRMKVASPERIRSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTKDYEC SCGKYKRMRYKGVVCEKCGVEVTKSKVRRERMGHIELAAPVSHIWFFKGIPSKMGLLLDM SPRVLEKILYFASYVVINPGSTDLVAKQEISETEYQDILEEYPDDTEFKAAMGAEAIKEL LSNIDLEKEYQLLLKELDESSNQKKVRVSRRLEVVDAFLTSGNKPEWMILDVLPVMPPEL RPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDIGAPEIIVRNEKRMLQEAVDALIDN GRRGRAVTGASNRNMKSLSDLLKGKSGRFRQNLLGKRVDYSGRSVIVVGPDLKFNQCGLP QEMALELFKPFIMNKVVEKEMAHNLKTAKKMVEKKDPRVYEVLEEVIKDHPVLLNRAPTL HRLGIQAFEPILVEGKAIKLHPLACNAFNADFDGDQMAIHLPLSNEAQIEARLLMMSTNN ILGLKDGKPITTPSQDMVLGAYYLTTIKEGAKGEGMVFESTNEMKKALVAGIVEYQSKVG VRVKKDAMDPGKIVESSVGRFIYNEGLPQDLGYVNRKEDPYSLEVDTLIDSGMLKEIIDK CFRKHGNIKTAEVLDYIKQTGYKYSTLSGLTVSMDDVKIPAEKWSLIDEADAAVDKYDKL YRRGLITDHERYEKVIEIWQDTTNKVTDALLADLKDDNNIKIFADSGARGSTNQIRQLGA MRGLMSQADGKIIEIPIKANFREGLSVQEYFISTHGSRKGLTDTALRTADSGYLTRRMVD ISQDVIVTEDDCHSDGFVVAHEFKDGNELIEDLRTRIVGRTSFEDIKDEAGEIIVHKGEV IDEDLADKIVAAGIKEVKLRSVLECKAKQGVCAKCYGRNLATGKHVNMGEAVGIIAAQSI GEPGTQLTMRTFHSGGIAGVGITQGLPRVEELFEARKPKGLAFIAANSGTVSLIQNDKKT DVEITGADGTSRKYNIPFGSRILVKDGEEVEIGAQLTEGSLDPHDVLDVLGKIGVQDYIT KEVQKVYRQQGVEIDDRHIEVIARQMLKKVKIIESGDTEFLPESLQDRREVDIVNDQMKE AGKKPAIYEQELLGITKASLATDSWLSAASFQETTRVLTDASIKGKVDDLRGLKENIIIG KLIPAGTGLKYYNNVEIDYETKELEDEQIKANLELIEAEEETEEL >gi|229269865|gb|GG666046.1| GENE 243 270404 - 271195 646 263 aa, chain + ## HITS:1 COG:YPO1959 KEGG:ns NR:ns ## COG: YPO1959 COG3850 # Protein_GI_number: 16122205 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase, nitrate/nitrite-specific # Organism: Yersinia pestis # 71 260 389 583 593 59 26.0 6e-09 MKTREKGIITYILLTSILGALTILTIPYAMAQESYLYYGYVLIFLICTILSGTVLKRYQK TIKYFDLGEYLTSQQEEFARIIHDEIIQDLYGIINNLNLKTPDVKKSKIIAENLENKART IMTSYRESLISDMSLEENVKSIFYDVGSLYPGKNFDLTLDISENTKEINPQSLRTILIIT KELINNIYKHSKGSKITYKMDLEGGDLILEVTSDGASENDFRNIGESRGGVLFMKFLLNS LGGSIKYFYKDGILKTQVRLGND >gi|229269865|gb|GG666046.1| GENE 244 271195 - 271785 584 196 aa, chain + ## HITS:1 COG:SA1666 KEGG:ns NR:ns ## COG: SA1666 COG2197 # Protein_GI_number: 15927422 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Staphylococcus aureus N315 # 2 189 3 203 207 96 32.0 2e-20 MKIIILDDHKNFGESLRALLMENVEISRCDFVSAIEEFYKKIETDSYNICLLDINLDKNS GFDVLKNLRAKKFGFKILILSSYTNPIYKKKSLDLGAAGYISKSIDSKSLIEKICQINNG FSFTNEKHFENPLTKREEEVLKALITGKTNTQIAKDLYISERTLYHHIENIYEKLKVENK VELYGKALELGYVDQF >gi|229269865|gb|GG666046.1| GENE 245 271856 - 272977 1141 373 aa, chain - ## HITS:1 COG:TM1183 KEGG:ns NR:ns ## COG: TM1183 COG1453 # Protein_GI_number: 15643939 # Func_class: R General function prediction only # Function: Predicted oxidoreductases of the aldo/keto reductase family # Organism: Thermotoga maritima # 2 373 4 377 379 304 40.0 2e-82 MRYFDFKGEKISRLGFGCMRFKTIDGDNSKIDKVESAKILKEAIGKGLTYIDTAYPYHEK MSEKFVGEFLEENNLRDKIYLASKLPCWLIKEKEDFYRIFSEQLEKLRTDYLDFYLLHSL DIKRFRQMVDLGVFDFVDELKEKGLVKNIGFSFHDEYEAFEEIIKAYDWDFCQIQLNYLD INLQAGMKGYDLAKKMGIPLVIMEPVKGGRLANPPIEVREIMAKFTYLSPAQLALKFPLS LDNVMTVLSGMNTSDQVAENMAIASADPSLSEKEREFYDKAREIYKKREKIACTACEYCL PCTVEINIPKVFSMWNKAFLYDEADISKKSYEEYLKDGVNPETCIECGKCENICPQSLEI IEGLKEANEFLSK >gi|229269865|gb|GG666046.1| GENE 246 273078 - 274346 1575 422 aa, chain + ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 51 416 61 423 512 180 35.0 4e-45 MKEKISFKCLPAFIILGVVTGLLIGIFKKLIGFLAGFMDGFLATGKTDDKLLFLGLLILI GLLTYFILSKDKNTKGSGIPVMTGMMEGTIAVSSEKTIIGKFVASVLTIGSGLTVGREGP SVQLGGLAGDIVGKFFPNVDRNLFIGSAAASGFAVAFNAPVASLIFAVEEIFRTHNFSTF LSSALTIISATVTSGLVFGDHPSLENIPAFGNIDQKSLALIVILGILAGLSGALFNKVVI GSKSLYKKIALPELVKYLAPFVITGLVLLIDPRLFASGEELIYLPSEGNEELITLIYMYG AKILLLALAFGIGLSGGSLVPLLAIGAILGNIYGSILADLGLIPVEMIYAISLIAMAGHF SAIVRTPITAIILILEMTGGAFSNILALAVVSFVAYLVAEIMKSKPFYEDLYERLLLTEK SS >gi|229269865|gb|GG666046.1| GENE 247 274445 - 275338 853 297 aa, chain + ## HITS:1 COG:lin2285 KEGG:ns NR:ns ## COG: lin2285 COG4509 # Protein_GI_number: 16801349 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 92 258 64 231 246 97 32.0 2e-20 MKKNYSYVLWISILIIFFCILKKNSEFNQAWVDSYMERMRLEEFLKSRISKDREEEIKKL TRKADEIRIQAFLDRKIKEKTQAESQAAAKHVKDLAKKYPQVKGRIIIKGTKIDFPVVQG KDNEFYLDHNFDNKYYINGAVFIDYVHKGDFSDQNTVIYGHNVRIGYIFHDLDKFRDKNF IKNHSEIIIDTPEKRRIFEVICAMDIKVDADYRFYEYDDDEFKDYLKLIKDNNILKNKPL PKKEDKLLTLSTCSDISDRYAIVAVETTGKFVRPKDFDHQKDLLLHDRRKTRDIFIY >gi|229269865|gb|GG666046.1| GENE 248 275396 - 276370 772 324 aa, chain - ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 1 321 1 317 320 184 37.0 1e-46 MEKFKKYYKKILLIIAIICITSTYIIGSYFVNFALVAKSGGENRPKIALNIEEDKIISKN KKALETRKDKWLAEVKDYTKKISVSTPDGLRLIGHTYEQNSPTDKWVIIVHGYQSSENRS KIYGAGFYKLGYNVLTYSLRGHKPSEGKYITMGDKDSEDLLSFINLIIKENPKAQIALHG TSMGGATVLNASGKILPENVKAIIDDCGYADLWKIFKKELRLRFNLPSFPVLYMANIMGY IKSNIKISSIKPIEEVEKSAIPIMFIHTTGDDFVPVSDTYSMYDAKEHGYKEKYIINGFG HADAVFADSDYLKKIDAFIKKSSD >gi|229269865|gb|GG666046.1| GENE 249 276732 - 277232 867 166 aa, chain - ## HITS:1 COG:BS_ytgI KEGG:ns NR:ns ## COG: BS_ytgI COG2077 # Protein_GI_number: 16080001 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus subtilis # 3 166 4 166 167 143 45.0 1e-34 MNITFAGNKMTLLGSQVEVGQKAKAFKATKNDLSDFNSEDLRGKVVVYSVAPSLDTSVCA IQAKKFNHDALKLSDDVVIVTITEDLPFAQKRFCANEDIANLEMVSDYKEREFGEKYGFL IDELKLLARGVVVVDKEGVIQYVEYVPEVTNEVNFDAALEKVKELI >gi|229269865|gb|GG666046.1| GENE 250 277628 - 278035 695 135 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486359|ref|ZP_03916675.1| ribosomal protein S12 [Anaerococcus lactolyticus ATCC 51172] # 1 135 1 135 135 272 100 2e-71 MPTINQLVRKGRKSEKSKSDTPALGYNYNTLKSRITPNQSPQKRGVCTSVRTVTPKKPNS ALRKIARVRLTNGAEVLSYIPGIGHNLQEHSVVLIRGGRVKDLPGVRYHIIRGTLDTAGV DGRKQGRSKYGAKRG >gi|229269865|gb|GG666046.1| GENE 251 278134 - 278625 823 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486360|ref|ZP_03916676.1| ribosomal protein S7 [Anaerococcus lactolyticus ATCC 51172] # 1 163 1 163 163 321 99 2e-86 MVKEGRKVSRKGHIPKREVMPDAKYNDRVVTKLINNVMLDGKKGLATKIVYEAFDIVQET KGEDAIEVFHQAMENIMPTLEVKARRIGGANYQVPMEVRPERRQTLALRWLVNFARLRGE KTMVERLSKEIIDASNNAGAAVRRKEEMHRAAEANKAFAHFRY >gi|229269865|gb|GG666046.1| GENE 252 278638 - 280710 2843 690 aa, chain + ## HITS:1 COG:BH0131 KEGG:ns NR:ns ## COG: BH0131 COG0480 # Protein_GI_number: 15612694 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Bacillus halodurans # 1 690 1 688 692 900 63.0 0 MPRQVALKDTRNIGIMAHIDAGKTTCTERILYYTGKIYKIGDTHDGTAVMDSMEQEKERG ITIGSAATTAFWKNHRINIIDTPGHVDFTVEVERSLRVLDSAVALFDAKSGVEPQSETVW RQADKYNIPRICFINKMDATGADFFMAVDTIKDKLKANAVPLEIPIGAEQTFEGAVDLVT MQAVTYSSEDLGAHPKYSEIPADLKDLAEEYRNNLLEELSEVDDTIMMKYLEGEAVTEDE IKTAIRKATIEQKIFPCLLGSAYKNKGVQPLLDAIVDYMPSPVDVPAIEGVDPKDPDVVI ERHPGDDEPTAALAFKVVTDPYVGKLIYVRIYSGTIESGSYIYNATKGKRERVGRIMQMH SNKQEEIPKGYAGDIVALLGLKDTTTGDSLCEQDNQIILEQMEFPDPVISVAIEPKTRAS QDKMIIGLQKLAEEDPTFQTRSDEETGQTIISGMGELHLEIIVDRLLREFKVEANIGNPQ VAYRESITKEAEAQGKFVRQSGGSGQYGDVMLRVEPGEEGSGITFESKIVGGAVPKEYIR PVEEGVKEAAAAGVLGGYPMVDVHVTLFDGSYHEVDSSEVAFHVAGSIGFKNAVQKAGPV LLEPIEKVEITTPDEYLGDVMGDVSSRRGKIDGMNPKDGIHVLDAFIPLSEMFGYATDLR SKTQGRATYSMSFDHYAEVPASIRDEVINK >gi|229269865|gb|GG666046.1| GENE 253 282274 - 282915 674 213 aa, chain - ## HITS:1 COG:CAC0884 KEGG:ns NR:ns ## COG: CAC0884 COG0664 # Protein_GI_number: 15894171 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Clostridium acetobutylicum # 3 212 9 222 229 78 28.0 8e-15 MDLREIKIFKNLTDQDLDLIRSKTEFIEKTYGKGEYIFMAGDKSGDLFYLMEGVLNVYQI DSNGKRFIFQNFTKPTLFGEVYSYLGEPFDFDCECASSCKILIIKDFKKIFEPPCPESFL RSYINFLSYKCLALSKKNQITSQASLRQKIGKYLLETENQGKVKLSMKREDLADYLSTTR PSLSRELSKMAEEGIIKVGGDFIEILDRNGIEF >gi|229269865|gb|GG666046.1| GENE 254 283193 - 284809 2159 538 aa, chain - ## HITS:1 COG:CAC3428 KEGG:ns NR:ns ## COG: CAC3428 COG1151 # Protein_GI_number: 15896669 # Func_class: C Energy production and conversion # Function: 6Fe-6S prismane cluster-containing protein # Organism: Clostridium acetobutylicum # 1 533 3 561 567 671 62.0 0 MFCYQCQETAGNKGCSKVGVCGKNESVANLQDLLIYTTKGLAGLVVKKGKACAKVYDRIS NNLFITITNANFNESAILDAIKKTMAFKEKIMGKIGTEGLTDIEKYISYDDEELIRKAVE VGVLNIINEDERSLVELITYGLKGMAAYNHHANVLGYRDEEVDFFIASALAKTTHNDKEI TDLINLVMETGSHGVKAMALLDKANTETYGNPEITEVDFSAGKNPGILISGHDLHDMKML LEQTQGTGVDVYTHSEMLPANYYPAFKKYENFHGNYGNAWWKQNEEFEKFNGPILMTTNC IVPPKKDNTYLDRMFTTSNAGYPGAFHIEADENGFKDFSQIIEMAKKCQAPENLEDITVV GGFAHNQVLALADKVVEEVKAGNIRKFVVMAGCDGRNPKRSYYTDFAKSLPEDTVILTAG CAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLVQIALALKDVFGLDDVNDLPIAYNIAWY EQKAVIVLLALLSLGVKNIHLGPTLPAFLSPTVVDFLVENFNIAPNSTVEEDLAKMIG >gi|229269865|gb|GG666046.1| GENE 255 285059 - 285256 210 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486364|ref|ZP_03916680.1| ## NR: gi|227486364|ref|ZP_03916680.1| hypothetical protein HMPREF0072_1767 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1767 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 65 103 100.0 4e-21 MRISIKRAIGLNIVVIFILAITFFEDLQMNSPHQKEDLLIIFLGEFAYWLTIIIGLYVIK RKNNL >gi|229269865|gb|GG666046.1| GENE 256 285491 - 287746 3294 751 aa, chain + ## HITS:1 COG:CAC0980 KEGG:ns NR:ns ## COG: CAC0980 COG1882 # Protein_GI_number: 15894267 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Clostridium acetobutylicum # 3 748 2 740 743 1008 67.0 0 MEVKAYDGFKGELWKDEINVRNFIQENYTPYEGGDDFLAGKSEKTTKLFAVVEDLINKEI RESYRNADTSRFSSIDGFDAGYIDKENEVIVGLQTDEVLKRIVNPYGGYRMVEQSLEAYG QEMDPVQAKYFKEFRKTHNEGVFDAYTKDMRTARHVGLLTGLPDAYGRGRIIGDYRRVAL YGIDRLVEEKKKDLDKIEIDENNLEATIRLREEVSEQIRALGKIKNMAAKYGIDISKPAT NAREAAQFLYLGYLAAVKENNGAAMSIGRNAGFLDIYIKRDMDRGILDEVGAQEIIDQLV IKLRLVRHLRTPDYDEVFGGDPTWVTESIGGMGLDGRTLVTKTAFRYLNTLINLGSAPEP NMTILWAEKLPEGWKKFCSKVSIMTDSIQYENDDLMRNMYGDDYAIACCVSAMEVGKEMQ FFGARANLAKSLLYAINGGVDEKKKNKDGSIIRLFNDVEPITTEYLDYDKVLANYKKVLS ELAGLYVKTLDVIHFMHDKYAYEAGQMALHDTYVKRNLATGVAGLSIAADSLSAIKYAKV KPVRDENGIAIDFETEGDFPKYGNDDDRVDQIAVDILTYFSNELKKHATYKNAKLTLSAL TITSNVMYGKKTGTTPDGRKAGEPFAPGANPMHGRDESGALASLNSVAKLPYECVCEDGI SNTFSIVPDALGKEDEVRIDNLVNIMDGYFGQDAFHLNVNVLQREKLLDAYHNPDKYPNL TIRVSGYAVHFNRLTDEQKREVLERTFHNHQ >gi|229269865|gb|GG666046.1| GENE 257 287761 - 288480 718 239 aa, chain + ## HITS:1 COG:CAC0981 KEGG:ns NR:ns ## COG: CAC0981 COG1180 # Protein_GI_number: 15894268 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Clostridium acetobutylicum # 1 237 1 236 237 213 46.0 2e-55 MAKLHSIETMGLVDGPGIRTVFFLSGCPLRCVFCHNPDTQSLDYGRDVTVEEIVKRALRM KPYFKNGGGVTLSGGEPLASGAFVLETIRALHKEAIHVAVDTSGVGDEKYYDDIAREADL ILLDIKHYDPYFFYEITKNYQDKLIKFMESIKKTDTRVWIRHVMMPFVTDTKEDMDGLVD FIRPIKANIDKIEILPYHKLGVCKYADLGKPYRIKNMEAMDKDKAKNFEIYANNMLKSL >gi|229269865|gb|GG666046.1| GENE 258 288490 - 289170 648 226 aa, chain + ## HITS:1 COG:DR2362 KEGG:ns NR:ns ## COG: DR2362 COG0664 # Protein_GI_number: 15807353 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Deinococcus radiodurans # 19 215 23 218 231 84 27.0 2e-16 MNDYKKDEKSFLAFLSDQELQRFKYRPQVLAYRKGDMIFSFGDSADFMYIILEGFIKIST YLSDGREQILYIYSEGDFVGAHNLLTEEEYIYEARALTKAKLLIISRIDFNNILKKNNKV LIKILDQSFRRIRRSEELIDRLSTINADMKVAKVLLDLADDVGIVKKDGVLITSHLSREE LGSYSGVVRETLSRKLSNFEKMGLIKIIGRNEILITNIRALEKMTS >gi|229269865|gb|GG666046.1| GENE 259 289348 - 290613 1686 421 aa, chain + ## HITS:1 COG:Cgl1071 KEGG:ns NR:ns ## COG: Cgl1071 COG3949 # Protein_GI_number: 19552321 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Corynebacterium glutamicum # 4 397 4 395 400 265 40.0 2e-70 MNKQTFKIMLAYVGVLTGAGLASGQELLQYFVSLGINGLVGISLVGILHMVIGGILLILG SHYLATDHSDVFDEITNKFISKFMDISLIFTCFVVGFVMLAGAGSNLNQAFGLNVNVGRV LCALLIIVVGMMDFSKVSKILGSFTPFIVGFVLIGSVYTFIKFKPDWQALNAFAVKLPSN FDNVGFAVLNYFGMCLMTAVSMGLVLGGDELSTENAGKGGLMGGAIVGIMGVLITLTLLI RVEEVYNLDIPMLYIIEDISPILGFVMALVVFGMIFNTGISLFYALARRFSNDDEKRFKI MLVAITGVGFVLSFLGFKKLVSIFYPIIGYIGIFMMALLVFAYFKERSVIRRESMKRLGI RHYMRKKLDDDLDFTKQDEERLNKLIDRSHIDNDQIEEKTEETVKEAIDNDEEPITDHGE G >gi|229269865|gb|GG666046.1| GENE 260 290750 - 291481 540 243 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 2 226 21 246 270 119 28.0 7e-27 MEVSYQAIKTGRFINRGFLNGPLCPIYGFGALGVIYFLTDIAKTNKLYLFFGSIFIATAL ELVGGFLLEKIFHKKWWDYSDMRFNLGGYICLEFSILWGLACFVLYEAIHPLVVRFFAFL NPKFIFYANIILLAIFAVDMAQTILTLVGLNKKFKKLQAASEDIREVSDDIGKRVYDRTM SIKEKREEIKPRVKELEAKRNKIRMDIANKFDKMSEKRLIKAFPNLIEDLVEKIDKDIEN IEK >gi|229269865|gb|GG666046.1| GENE 261 291571 - 292188 647 205 aa, chain + ## HITS:1 COG:CAC2451_2 KEGG:ns NR:ns ## COG: CAC2451_2 COG0500 # Protein_GI_number: 15895716 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Clostridium acetobutylicum # 2 188 7 195 216 79 30.0 4e-15 MLDNKGFDLWADGYDESVGLCDEENTYPFEAYKDILNAIYKDVLGAEAKNVLDIGFGTAT LASGLYDKGLTIYGQDFSEEMMKIAKEKMPNADLYAGDFGRGLVSSLLNHKYDAIIATYS LHHLSDEDKVSFIKTLLSLLNVGGKIYIGDVAFKTRRDLEATREKCKNEWDEDEFYFVYD ELKNHFSNIDFIPYSYCSGILTITN >gi|229269865|gb|GG666046.1| GENE 262 292331 - 293491 1289 386 aa, chain + ## HITS:1 COG:BH3708 KEGG:ns NR:ns ## COG: BH3708 COG1004 # Protein_GI_number: 15616270 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Bacillus halodurans # 1 386 1 388 388 430 56.0 1e-120 MKIIVMGMGYVGLSNAVLLAQTNEVIGLEIDQKKVDLINNKKSPLKDDYLIDYLANKELN LIAKTSGEEDFKDANLAILALPTNYDEVEKFFDTSFLDDAIKMIKSIRKDLPILIKSTIP IGYTDGKNKEFNCDNIIFSPEFLREGRALYDSLHPSRIIVSDKTEIGEKIAGLYKNEALN NPDVILMGRSEAEAVKLFANTYLAMRVSFFNELDNYAIAKGLDSKSIIEGVSADPRIGDH YNNPSFGYGGYCLPKDSKQLYANYENIPSALFKSIIDSNEVRKDFVSEDILAKNPQTIGV YRLVMKKGSDNFRKSAIFDVINNLKSKGANLVIYEPNLDGDDFEGMKLVRNLDDFKKVDL IIANRVEDDLKDVKNKLYTRDLFERD >gi|229269865|gb|GG666046.1| GENE 263 293492 - 294169 732 225 aa, chain + ## HITS:1 COG:no KEGG:Apre_0481 NR:ns ## KEGG: Apre_0481 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 225 1 227 228 335 77.0 8e-91 MTEKKNVPQVHSKLRKSFISVPEEIYKASGIKIFDKRIKSLLFTTDLAIIRNSNADSIMA VYPYTPLNSITEAIISIASVPCFIGVGGGTTQGPRSRFVAYYAELAGAYGVVVNGPIPHE DIREISKFVDIPVIATVSSLKDDYKAKIEAGAEILNVSGGKYTADLVSHIRADIGDEFPI IATGGKDGASILQTIKAGANAISYTPPSSSDVFGSMMDTYRNEDI >gi|229269865|gb|GG666046.1| GENE 264 294169 - 295101 1153 310 aa, chain + ## HITS:1 COG:BMEII0898 KEGG:ns NR:ns ## COG: BMEII0898 COG3191 # Protein_GI_number: 17989243 # Func_class: E Amino acid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: L-aminopeptidase/D-esterase # Organism: Brucella melitensis # 1 302 4 311 335 237 49.0 2e-62 MYSGYFTDVGNIKVGHAQDLEGGTGLTIILPDPGNTAGVDVRGGAPGTRETDLLNPINQV SEVSSIILSGGSAYGLEAASHLMKILEKEGRGFNVGVGVVPIISQAVLFDLSYKNSKRRP DAKMTEKAYCNARYQDKSQGIVGAGTGATVAKALGPDHLVKSGLGQASIKKGDLVVSAIV AVNAFGDIFDYHRAVQLAGPIVDGKMLKTVDMIDKILGSFADIKPANTTIGAVATNATFT KTELTKIAGMAHDGYARSINPVHTLFDGDTIFSLATNKVQANINLVGTLAAEAMSMAIAN AIYSSREKNK >gi|229269865|gb|GG666046.1| GENE 265 295757 - 296104 410 115 aa, chain + ## HITS:1 COG:MA3263 KEGG:ns NR:ns ## COG: MA3263 COG1380 # Protein_GI_number: 20092079 # Func_class: R General function prediction only # Function: Putative effector of murein hydrolase LrgA # Organism: Methanosarcina acetivorans str.C2A # 4 112 2 110 165 68 40.0 2e-12 MKYLKEFCYILFFLLLGFIAKKLTGLPIPEPVFGMIFLFIALCSKFLKVDDIGETSDFLT SILAFTFTPLGVALMVQFDVIKDNAVKILIVMTVSCLITMAVTAKVVELVQKVRK >gi|229269865|gb|GG666046.1| GENE 266 296106 - 296846 876 246 aa, chain + ## HITS:1 COG:MA3262 KEGG:ns NR:ns ## COG: MA3262 COG1346 # Protein_GI_number: 20092078 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative effector of murein hydrolase # Organism: Methanosarcina acetivorans str.C2A # 1 245 6 234 238 174 44.0 1e-43 MSEFLNTYVADNDFFGIILSIVMFRIGMVINKKTKIAFLNPLLLAIVFCIIFLKLTGISY ENFNKGGKYISFMIAPITVALVVSLYRNIEKLKANLIPILIGVIVGSFVAILSAYLLSKL FGFDRDLTLSMMPQSVTTPIAKSLTEEYVAKFGADEVTIKTFAAITAITVILRGTVGAIA APTVMKVMRVKDPVAQGIGIGTSSHAMGTSKAIEMGEVEGAMSGLSIAVAGICTVVLMPL FIILLF >gi|229269865|gb|GG666046.1| GENE 267 296870 - 298054 856 394 aa, chain + ## HITS:1 COG:FN1538 KEGG:ns NR:ns ## COG: FN1538 COG0003 # Protein_GI_number: 19704870 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Fusobacterium nucleatum # 4 391 3 395 396 257 38.0 3e-68 MTKKIFMYTGKGGVGKSTLASSTALISAKKNIETILISIDSAHSLSDIFSIKIGNTLTKV RDGLTAIEFDSSKILEEEFPSIKASLANEFRKVDFSKISYNSSYDMPFVVNILSLLKILD IYENYDFENIVVDCPASASTFAYLKIPEMLSWYLEKFFGVGKGIIRTLRPISKYKYQIDL PDKEALDKLEVTYQRLKKLEDILKNKTISTIRLVGLAEKMVIEESKRDFAYLSLFDYNVD GFFANRLLADEDIDFIKKRIQIQNKRLEEIKACFYNLPIYKIGLMNKDLNSLVDLEDFAD SLDFKDNLLDIRPFKEGHYFEKIPDGYILKINIPAVEDVEVYKKGSDINIKLKDIKRIIS LPNVCINSELSKYFCQGDELFIYLESKDQEELSI >gi|229269865|gb|GG666046.1| GENE 268 298051 - 299214 927 387 aa, chain + ## HITS:1 COG:FN1537 KEGG:ns NR:ns ## COG: FN1537 COG0003 # Protein_GI_number: 19704869 # Func_class: P Inorganic ion transport and metabolism # Function: Oxyanion-translocating ATPase # Organism: Fusobacterium nucleatum # 1 387 1 388 388 284 39.0 2e-76 MRIIINTGKGGVGKTTISALTAINISKRYKTLVISSDLAHSLSDLLDIKLDDTPRKVAHN LYALEINAIKESKKAWGNLNLYIRQLVEENALDDIQLDELLLLPGLDDVFSLLKILEIYK SGEFEVLVVDCGPSGETISLLSTGEKFKNLADSLVPLVKRFNRLFGSFIEKQTEVKKPKD IVFDEFISLSKKLYELEKILQDPAQTTIRFVTKANKVVANETFRSFSLTNMYDFLTDCIF VNMIYPEAMRNSSYDNLLDEEARIIRSIDDFFKEEKVIKLSLKDYEVIGLEALNRLHDEY FVDQYLEDIFIDKKSFELIEEKASKVILINLDYAKGDEVKVEKIGEDLEISYLNFKRRFK LPDTVSSRKISSFSLEDKKLRIVLDYD >gi|229269865|gb|GG666046.1| GENE 269 299242 - 299790 613 182 aa, chain + ## HITS:1 COG:FN1539 KEGG:ns NR:ns ## COG: FN1539 COG1556 # Protein_GI_number: 19704871 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 6 181 7 182 183 216 56.0 1e-56 MEGKMELFDTFAQNLESVNGTCYKVSKNDLAETVAKIYKDNAIASTCMLETDLAKEIGLS DCLKANGITVHTDHIRLNSETDKGGITEVAYGIAELGSVIQASDNVDTRLMAIMPDYYIG IVKGSTIVKTYDDMFDVLAELKPFPKYVGFITGPSRTADIECVGTVGVHGPLQMSIIIVT DL >gi|229269865|gb|GG666046.1| GENE 270 299814 - 301973 2357 719 aa, chain + ## HITS:1 COG:FN1540_1 KEGG:ns NR:ns ## COG: FN1540_1 COG1139 # Protein_GI_number: 19704872 # Func_class: C Energy production and conversion # Function: Uncharacterized conserved protein containing a ferredoxin-like domain # Organism: Fusobacterium nucleatum # 7 464 6 463 463 742 76.0 0 MVDTISLKDEIKDALDNATLGRTLGNFCKTYPQRRLNSYKGVDFEQTQQAIKKVKSYAAD HVDEMIAEFKKNCEARGGHVVVVKSKEEAAEWVKNFIKEKDIKTAVKSKSMCSEEIHFNK ILKDNGVECQETDLGEFIISLEENTPVHMVMPALHLNKEQVADLFSDYTKTDHAPVISEE VRTARKVMRDKFTHADLGVSGANVAVAETGTVFTMTNEGNGRMVGTLPKDHLYIFGIEKF VKSITDARWIFKALPRNGTAQRITSYLSLYTGACEVVTDKENDTKEDKGFYCLILDDPGR REILAEEEYRQIFNCIRCGACLDVCPAFALVGGHVYGSNVYTGGIGTLLTHFLIDENRAN QIESVCLQCGRCNEVCGGGLPIAQMIMGIREENVKKNPNPVKKFALDAVTDRKLFHSLLR IASIAQEPFTKGGTMIRHLPDFAAGMTGGKVLPSIAKVPLRDIFDEIDQKVENQKGTVAL FAGCLLDFVYVDTAKSLIKNMNSIGYKVEFPMGQACCGCPASNMGDIENATKEAEINIKA MDAEKYDYILLACPSCTHQLQSYKDFFEEGTEMHKRAVELGSKCVDFCKLFHEKDTHENH GDGKNVKVTYHDSCHLKRTLGVFEEPRDLLKATEGVEFVEMEDSDNCCGFAGSYNVLYPD ISSKILKNKIENIKKSGADVVAVDCPGCMMQIRGGLEAEGLDIKVKHTSEIISEKRGLI >gi|229269865|gb|GG666046.1| GENE 271 301976 - 302968 1004 330 aa, chain + ## HITS:1 COG:FN1541 KEGG:ns NR:ns ## COG: FN1541 COG0142 # Protein_GI_number: 19704873 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Fusobacterium nucleatum # 12 328 3 323 326 228 42.0 1e-59 MNVIVSEALTREKLIDDCVSKVHEEIKNILSDYKSSQNLCDIIKDALTSSGKMLRTKLLI SISLMGDGEISKKVISQAAAVEITHLASLIHDDIIDDSTLRRSHKSTQAKYGKDVAVFAG DYMIAKVFSYLANENLYDEIKVIANTIKHMCNGEVGQNLIKYRLDMGEDEYFENISGKTA SFFKTVCYFGARNAGFGQMDTERMVAFGENLGLMFQLKDDLLDLFSNKLITGKEEFSDIR EGIYTYPVLLGLKDEDYGEEIHRILLENKERKLGEDELISLRKLLIKSKADTLTALKIRD LADENRFILASIDGKDVMYLEKILEKVENS >gi|229269865|gb|GG666046.1| GENE 272 302968 - 303888 584 306 aa, chain + ## HITS:1 COG:FN1542 KEGG:ns NR:ns ## COG: FN1542 COG1575 # Protein_GI_number: 19704874 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Fusobacterium nucleatum # 6 304 5 302 306 219 45.0 6e-57 MQTYQRMTVKNIINFANPKSFVASVIPAIFGILLSLKFGYSISLIRALALIFACVFFQAS VNTINDYSDFVNGVDSIDDNLKEDDNVMFYNHIRPKSVDNLGWIFLGLGIGLGLLALDGI NYASIVIGIIATLTVLFYSKGPFPISYLPIGELTSGLVMGGLIPLGVNATISGRLNPEIL AYSLPFILGIALIMMSNNASDIEKDKRAKRYTLAVVMGREKIRILYKITVGLWIVSQLVL TYYLLGYLFLGINLILFMIKGKFLKNLIFASLLPEARIGQMMGIGMANVLINGTYLLCLA LSFIGS >gi|229269865|gb|GG666046.1| GENE 273 303890 - 304579 288 229 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163754278|ref|ZP_02161401.1| 30S ribosomal protein S15 [Kordia algicida OT-1] # 10 228 1 221 221 115 32 3e-24 MNKSKKVYDIFQNISPYYDRANDRISLGLQKKRKNKFVSEVLNTINEDSDLLDLCCGTGD IGLSLKEKSPARVVGVDFSENMLKIAKAKAKSFKNISFIKADVKNLPFKDETFDNITISF GLRNTDDYKKVLEEMVRVGKDKAFVYVMDSFTIENIFIKPFYILFFKYLMPLLGGGIKRY KDYAWLYESTKLFISPEELVKLFESFGLKNIRVKKMLFGACVIVSGQKI >gi|229269865|gb|GG666046.1| GENE 274 304607 - 305902 1700 431 aa, chain + ## HITS:1 COG:FN1544 KEGG:ns NR:ns ## COG: FN1544 COG0644 # Protein_GI_number: 19704876 # Func_class: C Energy production and conversion # Function: Dehydrogenases (flavoproteins) # Organism: Fusobacterium nucleatum # 1 431 1 431 431 553 64.0 1e-157 MSEDKFDVIIVGGGVAGLAASIVLAENDLEVLLVERGDYCGAKNVTGGRLYGHSLEKIIP NFADEAPIERKVVKERISMMSEKSSLDIGYSSKELGENKDSSSYVVLHSKFDQYLAEKAE EAGVAIITGVLVEKLLLEEGKVVGIDATGEEMYADAVIIADGVNSLLSQQIGIKKELEPN QVAVGAKEVIELSEEIINERFNLESGEGMSWLSCGAPTMGGFGGGFIYTNKDSVSIGVVA TLSDIGYSNTKLTDLLERFKEHDSVAPFIKGGKTIEYSAHLVPEEGIHMVPQIYGDGFLV VGDAAGFCINLGYTVRGMDFAIESGRLAALAILRAKEKEDFSKESLAVYQDLVNDSFIMK DLMTFKAFPTILSRREIFSDLPEIINDVAGRAFTVNGGDSKGFIMGTVNDLATRISATQL SDFISTVMEAL >gi|229269865|gb|GG666046.1| GENE 275 305902 - 306186 197 94 aa, chain + ## HITS:1 COG:FN1545 KEGG:ns NR:ns ## COG: FN1545 COG2440 # Protein_GI_number: 19704877 # Func_class: C Energy production and conversion # Function: Ferredoxin-like protein # Organism: Fusobacterium nucleatum # 1 94 1 94 94 157 77.0 5e-39 MKRMSVEDKLGLNIYHTDEFNSHIDVDLEFKDEDEINKLILACPAACYTYVDGVFGFSHL GCLECGTCRVLSHGKIVKDWKHPQGEVGVTFRQG >gi|229269865|gb|GG666046.1| GENE 276 306343 - 307092 278 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 246 4 239 242 111 31 4e-23 MKLLEGKVAVVTGSSRGIGFAVAEKFLDNGAKVAILGSREESANKAIDKLKEKYDSSLFK GYWPRLTDEVSVKEFVGEVIKDFGKVDILVNCAGISDNIPSVDADLAHFAKVMDINVNGT YNMIHNFLPHFLERKSGSIINFSSMVSKNGQPTGVAYPTSKFAINGLTVSLARELGPSGI RVNAVGPGVTNTDMVKVLPKEQIEPVKQMIPLKRIGEPEDVAKAVLFLASDLASYVSGEI LYCDGATFM >gi|229269865|gb|GG666046.1| GENE 277 307257 - 307541 489 94 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486386|ref|ZP_03916702.1| ribosomal protein S6 [Anaerococcus lactolyticus ATCC 51172] # 1 94 1 94 94 192 100 1e-47 MNNYEAVLIFKTELADADRNALLDRFKGHIEENGEVVSVDDWGKRRLAYEIADLKEGYYY IVDFKSDPDHIKEFERRLRLSDFVLRYMVIRKED >gi|229269865|gb|GG666046.1| GENE 278 307543 - 308055 511 170 aa, chain + ## HITS:1 COG:lin0097 KEGG:ns NR:ns ## COG: lin0097 COG0629 # Protein_GI_number: 16799175 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Listeria innocua # 1 141 2 133 159 101 43.0 6e-22 MNKVILIGRLVRDPELRYTQGNQAVCTFTLAIDKRLSREKREEAEAANRPTADFPRITVW GKQAENASRYLFKGSQCAVEGRIQTGSYQDRETGKTVYTTDVVADNVEFLGARSERQAHS SNTGDNQDVYQNSYSQTNQYQNNQPSAPSTNDDFFDDDFTEIQDDGRIPF >gi|229269865|gb|GG666046.1| GENE 279 308081 - 308305 377 74 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486388|ref|ZP_03916704.1| possible ribosomal protein S18 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 149 100 1e-34 MARRFKPRKKVDPFVKDPSKVIDYKDIETLKRFVTDRGKILPRRVTGLNAKHQREITRAI KRARQVALLPYEEN >gi|229269865|gb|GG666046.1| GENE 280 308436 - 310400 3292 654 aa, chain + ## HITS:1 COG:FN2030 KEGG:ns NR:ns ## COG: FN2030 COG3808 # Protein_GI_number: 19705321 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Fusobacterium nucleatum # 3 654 7 668 671 536 53.0 1e-152 MLIVIISLIVAILALVLMAYTIKERILPVSQGSKRMHEISGYIKNGAMTFIASEYKFIVA FVVIVSILISIFLDFRIMICYILGSAFSMLTGFIGMRTATEANSRCANEAMEGGTNSALK LAFAGGSVMGYAVTGLGFSGLLICYLIFRDPAIVMGYSLGASSVALFARVGGGIYTKAAD LGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYAGAIISAITLGLVS YGDAGLNFTLLLVTVGILASLVASFLFTSKNHRDPQKALMMTIYVSGAIVLIAAVILSFA YFGNIRAALAIITGIIVGIAIGLLTEVYTSDKFRFVQNIAEESKTGVATNIIAGLSTGML SSVFPIILISLGIIAAYWADGVFGIALSAVGMLSTTATTVSVDAYGPITDNAGGIAEMAA LPSEVRDITDELDSIGNTTAAIGKGFAIGSAALTALSLFVTYSETLNLESISILDSHVVA GMFVGGMLPFLFTALTMNSVGKAATQMIEEVRRQFRNDPGLLEGTSNPDYQRCIEISTSA SLKEMILPGVLAIIVPIFVGLVFGPQSLGGLLAGALVTGVLMAIFMSNAGGAWDNAKKYI ETLDGENGKGSDAHKAAVVGDTVGDPFKDTSGPSLNILIKLMTVVSVICAGLFI >gi|229269865|gb|GG666046.1| GENE 281 310628 - 311110 557 160 aa, chain + ## HITS:1 COG:no KEGG:BP951000_0625 NR:ns ## KEGG: BP951000_0625 # Name: not_defined # Def: phage protein # Organism: B.pilosicoli # Pathway: not_defined # 5 91 15 99 375 92 54.0 7e-18 MTATYYTILPAEVRLDKRLLPFERILFSDILSLANKKGYCFATNAYFAKTYGVSTVSIST WISSLVKYGYLRRVYDYKDNTKMIERRKLYIKPDFMAYKTSLSDPHQADFKQGIQGDFKD NNININNIKDNTDYTRKIDGGKSYRGPRVSDQLQAMLDKI >gi|229269865|gb|GG666046.1| GENE 282 311122 - 311346 258 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486391|ref|ZP_03916707.1| ## NR: gi|227486391|ref|ZP_03916707.1| hypothetical protein HMPREF0072_1794 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1794 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 124 100.0 3e-27 MVDVIYKKGKKNIIIDGREYGAISLYFHIKRNILILKRLKERGEWDEERQMEHKAYIERY LKAFKDNFDDEAIW >gi|229269865|gb|GG666046.1| GENE 283 311983 - 312822 942 279 aa, chain + ## HITS:1 COG:BH0061 KEGG:ns NR:ns ## COG: BH0061 COG1947 # Protein_GI_number: 15612624 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Bacillus halodurans # 4 265 6 270 287 168 36.0 1e-41 MIKKCFAKINLSLDIISKRPDGYHNIDTLMARISLYDKLEIEKTTDGKFSYESNVDLGDV KDNLIFKAYDLMKSLAGDKASGIRVRLTKNIPVAAGLAGGSTNCAETMKALNEMWGLSLT TKQLMDLGAKLGADIPFFFLDRAARATGIGEILEPFRIKTPLKVLLVNDGTNISSAHVYK KTKLFGHIKTGKIAEGLKAGDWSVVNDFENVMEDVVLKDFANLNPIKENLIKNGAIKALV SGSGASIFGVFRDEDSLNRAFENLKDSYKFARKVDLIDD >gi|229269865|gb|GG666046.1| GENE 284 312815 - 313564 627 249 aa, chain + ## HITS:1 COG:aq_325 KEGG:ns NR:ns ## COG: aq_325 COG0796 # Protein_GI_number: 15605845 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Aquifex aeolicus # 4 244 3 248 254 120 32.0 3e-27 MTNIGIFDSGLGGIAVLNELAKKNKANYFYLGDNLRVPYGNRSKAEITSFATDIVNFLEG YDIDYYIIACNTISVTCKDYLREKFKKKFITIADMAIEAAMEYDGDYLALGTKATMESHF YKTTLEAKKPCKVYESKAIDLVNLIEGGVLEGATLNGALDEYLSIANEKKLANIILACTH YPIIKGEISKRLDYKANIIDPAVFLADNIKTDDGANGVNIFMTKESQETSALIKKIMEVD YKLTFIGGL >gi|229269865|gb|GG666046.1| GENE 285 313566 - 314471 1050 301 aa, chain + ## HITS:1 COG:jhp0263 KEGG:ns NR:ns ## COG: jhp0263 COG0248 # Protein_GI_number: 15611333 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Helicobacter pylori J99 # 2 298 4 296 484 113 30.0 4e-25 MIYAIMDIGSNTVRLSVYKEKNGEAVNLFSEKDQVSLKSYVKGGRLSEKGIKRLHSTLAK FKAVVDNFDDIDEVHPFATATVRDVANRSEILSLIKEDLGLEIEILSGEKEAQLAFVGAA VSTDVKEGVLCDIGGGSTEVVLIDQGKVIKSTSLSIGSLSAFNDYVDGLFVDKLSRKEIE KRVVQLFDDASMYREEFKVLSAVGGSARAALMVYREYYDLGDDVRTMNAADFNKMVKDII KKSDKKKMHLILDIKPDRIHTLLPGMVIMDKICKFFSVETINVSQTGVREGYVYSKLLGR K >gi|229269865|gb|GG666046.1| GENE 286 314474 - 316651 2029 725 aa, chain + ## HITS:1 COG:BH1392 KEGG:ns NR:ns ## COG: BH1392 COG0855 # Protein_GI_number: 15613955 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Bacillus halodurans # 4 673 19 686 705 436 37.0 1e-122 MKNYTQNRELSWLEFNKRVIEEAMDNTVPVLERLKFLSIYDTNLEEFFMVRIGSLTDLSK LKKQPIDKKSGMSASEQIDACLTKLGPMYEKKDQIYFDLVNDLADVGINIQKFSDLDEKS KDFCQAYFDTKIEPILSFQIIDRVHPLPRLANLSMSVVFDLVKKKSKSSKQKEIIGIIYL PERLNRWVMVADRTYVLLEDIIKEFGAELFEGYKVQNAFVMSLTRNADISYDDDDYDVEE DFRTYMKGKLKKRKRLKPVRLEVDSPLDIEDKEFLCKNFELNDKSIFVTKTPLQLGFIFD FISKLPSKVKSDLSYENFSPQPSAMVNPNRSMIDQVLEKDIILSYPYESMDPLIRLLDEA ATDPNVASIKITLYRIAKDSEIAKSLIKASENGKEVVVLMELRARFDEDNNILWSSRLED AGCNIIYGFDHYKCHSKVCLITRFIDDEVSYITQIATGNYNEKTAKLYTDFSFMTGDMVI GQDAKDLFDNIMIGNLDGEYEKLMVSPKSMPEGLEKLIKKEIKKAKKGEDAYIRLKMNSI SDRGLIDLLVAASKAGVEIKMMVRGITCILPGVEGETENIEIYQIVGRFLEHHRVYQFGR DNPKVYISSADFMTRNIRNRVEVAVPIEDSEVKKYILNFMDIMFADDVKIRKLYPNGEYL PVENKKNFNAQEVLMKNAIEKYERAKLTIEENEIKNNYKTIRVQSNKKDPRKASFIDFFK NLFKI >gi|229269865|gb|GG666046.1| GENE 287 316883 - 317881 1203 332 aa, chain + ## HITS:1 COG:BS_yodJ KEGG:ns NR:ns ## COG: BS_yodJ COG1876 # Protein_GI_number: 16079020 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 177 330 85 268 273 99 37.0 9e-21 MSNKGIRELKRRKRREARKKTRKAVLLGIGVVLTLTTAKFALQKEDNYQIRRPSEYRIAS GELMSNENRQEKTSTSDVHVATEIGFNNIKIKDELKIEDSAYQDELIQYVKCLQTQYAYQ FPNDYSKTDKFVKEGQYLGFYGCENGFAKVKIDDSYYYVNKYGLSKPEAGEDIKVVNGLV YVSEAYPLPANFDPGVDKTARRAFETMRQDMARAGLDLRIASDYRGYELEGKMHDAGEVD AEVAGTSEHQTGTAFDFFTEGTKYNDKFEATAEYKWLAENAYKYGFIERYPKGKENKTHH KAQAWHYRFVGVENAKEMYDNNLTLEEFLKIS >gi|229269865|gb|GG666046.1| GENE 288 317890 - 318261 544 123 aa, chain + ## HITS:1 COG:PAB0825 KEGG:ns NR:ns ## COG: PAB0825 COG0251 # Protein_GI_number: 14521450 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus abyssi # 2 121 4 124 127 130 56.0 4e-31 MKVIQTKKAPAAVGAYAQGIVTDNLIFTSGQLPLDPETGELEMDIRKATKRALENIKAIV EEGGSSIDKIVKCNVFLDDVNDFAAFNEVYEEFFGDHKPARSALEVANIPKGAVIEIEAI ALS >gi|229269865|gb|GG666046.1| GENE 289 318712 - 319197 523 161 aa, chain + ## HITS:1 COG:L24277 KEGG:ns NR:ns ## COG: L24277 COG0494 # Protein_GI_number: 15672204 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Lactococcus lactis # 46 159 1 119 119 98 45.0 4e-21 MDQDCGFSKGDKWFRYRAAAIIVEDDCVLFARNEADDYYYSIGGGVHLGESSEEAVKREV FEETGIKYDVDYMAIIHENFFVGTSDLEGSLCHEISFYYMMKPKGNKNLNSHSLTKGGLK ESMHWLPIDELEKYKAYPTFMKKYLKSDHKGIEHIITDERD >gi|229269865|gb|GG666046.1| GENE 290 319433 - 319840 275 135 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486400|ref|ZP_03916716.1| ## NR: gi|227486400|ref|ZP_03916716.1| hypothetical protein HMPREF0072_1803 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1803 [Anaerococcus lactolyticus ATCC 51172] # 1 135 1 135 135 257 100.0 2e-67 MDNKIYLIFLGVHILIIIVNYHLLKNPKPYPPEEVREEFKRGRESLSSYKYGGVSHYLLP RLVKSQANWINGNAYWYRSSVKFGIFGIGITLIKAILGEVFKLFDPLMGLFIILFPLVLG MIGLCIRMEKDVLKD >gi|229269865|gb|GG666046.1| GENE 291 319894 - 321261 1056 455 aa, chain + ## HITS:1 COG:alr3672 KEGG:ns NR:ns ## COG: alr3672 COG1012 # Protein_GI_number: 17231164 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Nostoc sp. PCC 7120 # 3 454 9 459 460 407 45.0 1e-113 MNLENVIKNQREFFLENNTKSYDFRLKMLKKLRKAIVNHEEEILTALEVDLGKSNFESYI TEYSFVIEEIDYAIKNLKSWMKKVKVGKSLTTFPAKSFYVYEPLGVTLIISPWNYPFNLS LGPVVGAIAAGNTIILKTSSKSTATSKVIANIIGDNFREEYLIHLDNAKLDYDELISQSY DHVFYTGGPGVAKKIMAAQATHLSKVTFELGGKSPCLVEKTADIKMAAKKIAWAKTVNAG QTCIAPDFLIVDKAIKDDLISELKVKIRGFYGENPLSNVDLPRIINTHHFDRLLGLIDED KVVFGGDFDKEILKITPTIMDGVDFDDPVMGEEIFGPIIPIIAYDKLDEILRKIKKMPKP LAFYTFTSDRKIEEKIIREMEYGNGAINDCLMQVTNPRLEFGGVGNSGQGGYHGYFGFMN FSNRKSMVKARFFDNFLRYPPYSEQKLRLIKKILG >gi|229269865|gb|GG666046.1| GENE 292 321526 - 322743 1662 405 aa, chain - ## HITS:1 COG:FN1423 KEGG:ns NR:ns ## COG: FN1423 COG0426 # Protein_GI_number: 19704755 # Func_class: C Energy production and conversion # Function: Uncharacterized flavoproteins # Organism: Fusobacterium nucleatum # 1 400 1 403 405 332 40.0 8e-91 MHNIIEVLDNIYWVGVNDRRIDRFENMFEVPNGVSYNAYVIKDEKNALMDSVEGAFTRQY LENVKAALNGDNLDYIVVSHMEPDHCRNIDFILNEYPNCKFVGNAKTHKFFEQFYDDKYA DRYIEIKEGDEINLGKRNLKFVFAPMVHWPEVFMTYETTEGLFFSADAFGSFNAIAGNIE ASKVIHKGDWLEQARRYYINIVGKQGKMVQNLFKKVADLKINAILPLHGPVYKDPESISF ILEKYGRWAGFKPEQKGVVIVYASMYGDTEQASDILANYLAQEGVEDIALYDISDWDYSY PIADCHRFTHQVFAPINYNAGLYYKMDAFLRELVGTGYQNRTVSFLNNWSWGGKSLEISQ EILEPAKCNYIGDVVKINSGVKEPQVEELKALAKIIAEDLKNTEI >gi|229269865|gb|GG666046.1| GENE 293 322901 - 324571 2093 556 aa, chain + ## HITS:1 COG:FN1424_1 KEGG:ns NR:ns ## COG: FN1424_1 COG1960 # Protein_GI_number: 19704756 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA dehydrogenases # Organism: Fusobacterium nucleatum # 1 370 1 377 377 229 34.0 8e-60 MTYKLAKDTKDFRKFVRDFSEEKLRPLASYMQEAFPKEVLKEIGEAGLLSIPFEEKFGGA GLSFENYAIAIEELARINSGLASLVIAHTSLATWPINAFGNDKQKEKYLKLFLDGKNLAG LGHYEEDEEIKTTATDEGDYFLLNGKKILVTNARLANYYLITALTNPRDKENGLSLFILD KDCPGLSFSKTYDNLGSRSAITGDLILKDARVPKENLLGELNKGVTYMEEIFEASNLATA ALALGLGDASYEASQAYLQSGLKSFKARKAAKVNRPILASMATDLKAAQMMVRDAALKMD AKAEFYGKDTSMAKLFASRLAEDLTSKALDMCGGISSQATDLETLYRDAKVCQIYDGSSD LMKEMIATYILDKKEVKKATKAEDAVKKEPVKVEERKKEVFVGDVRESVKKVVAALLADG IKLKKDPVDLEGPVDSAERAVAVGMGLGDKQNLEMVKELAKLTGSVLGASRPAAQVRHYV SDDHYIGVSGKKFAGELYFGIGISGALQHLKGIEAARKVVVINNDEGAQFFKNCDYGIVG DFTEVLPILIEEIKNL >gi|229269865|gb|GG666046.1| GENE 294 324658 - 326448 1937 596 aa, chain + ## HITS:1 COG:CAC1050_2 KEGG:ns NR:ns ## COG: CAC1050_2 COG0171 # Protein_GI_number: 15894337 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Clostridium acetobutylicum # 282 585 1 305 310 270 44.0 6e-72 MKRNIKIKSASFPVSLGNVPENLKKIKELIKKSEEEKVNILSLPELCLTGASLYDAYLEE DLLKSAEDGLKDLIAFSEKFDLAFTIGLPIRTEFGLYNAMALIKSGELMGLVSKENLKPY EKTIFESEPRGEFKVLDYRLDEEPFVSIISGLKIGITIGEDEEMTIPKSLKLKEMGPDII LNPSAVARNIFTGGKIRKNIEFLSKDVIYVHTGAGLGESSTDMVYTGESYLAKNGQILDG DTQVFYIEIYNEDWTENFNIFTDEPYRVEKFPYLPKAEYSKEYMEDALEIQALGLLQRMK AVGTEKVFLGVSGGIDSTAVLLAIDKAYEIAGFDKEKIGAYTMPAFGTSDRTKSNAYLLC EALGIDLKEINISKSVTAHLHDIGHDGKTADLAYENAQARMRTQVLFDLSNMGGGLVIGT GDLSENMQGFATFNGDHMASYGLNATLMKTELRYLIKSYAHFTGNDKLKKVLTDILATPI SPELVSEKAGEITQKTEDIIGPYELLDFFIYHHLTYHKSARQILTEATYAFGDSYDEGTI KKWLKSYFKRFAQSQFKRSTAVDGPDVTGRSFSPRLGFKIASDMASDLYLGDLDEK >gi|229269865|gb|GG666046.1| GENE 295 326438 - 327235 725 265 aa, chain + ## HITS:1 COG:lin0757 KEGG:ns NR:ns ## COG: lin0757 COG1408 # Protein_GI_number: 16799831 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Listeria innocua # 49 262 49 285 293 95 33.0 8e-20 MKNKKLVAGLVLATMVLTGKYLHDQAFVGVEKKVTIKNSKVKTDLKITHISDLHSNVLSN LDEVLDNIKAFNPDLIFLTGDMIDYPTPSKIERTMYFLKRLSKLGIKTYFVSGNHEEASE ESTIFYELIKDLAISKLDNEGEFLQIRDNKVYVYGVPYWGVDLSNFKPEASLNLILAHFS KRIRENYDPRMDIIFSGHTHGGQVRAPFIGGLIAPGEGYFPDYDMGLYEYKQSQIYVSAG LGNTFLPLRFLDPISYTNITIKLAS >gi|229269865|gb|GG666046.1| GENE 296 327366 - 327593 363 75 aa, chain + ## HITS:1 COG:no KEGG:MGAS10270_Spy1928 NR:ns ## KEGG: MGAS10270_Spy1928 # Name: not_defined # Def: RelB protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 1 75 16 90 90 98 73.0 7e-20 MSVVSLRLNEEENNLFRTYSRHTGKSLSELFKSALANQIEDEFDYDTGIKALKDFEKKPI TYSIDDLILELENDL >gi|229269865|gb|GG666046.1| GENE 297 327583 - 327849 344 88 aa, chain + ## HITS:1 COG:SP1223 KEGG:ns NR:ns ## COG: SP1223 COG2026 # Protein_GI_number: 15901085 # Func_class: J Translation, ribosomal structure and biogenesis; D Cell cycle control, cell division, chromosome partitioning # Function: Cytotoxic translational repressor of toxin-antitoxin stability system # Organism: Streptococcus pneumoniae TIGR4 # 3 87 2 84 84 73 47.0 1e-13 MTYRLVVSENVRKKIKKMDKYLGLMLAKDMKAKLDGLENPRRFGKALVGEYKRLWRYRIG AYRVICDIRDDELIVLAIDIGHRKNIYE >gi|229269865|gb|GG666046.1| GENE 298 328126 - 328548 647 140 aa, chain - ## HITS:1 COG:sll1937 KEGG:ns NR:ns ## COG: sll1937 COG0735 # Protein_GI_number: 16329701 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Synechocystis # 14 135 15 135 138 80 32.0 6e-16 MQLNDLLKDKNLRITKQRRLILDYIDKKNEPVSSQEIYDDLKKEMAIDLSTVYRNLNILE ENDLLLKTSDLDGISYYQLKKDDHKHFITCSHCHKKYIIKSCPVHDLEKEVAAETGFIIN GHNFEFYGICPACQRKMNQA >gi|229269865|gb|GG666046.1| GENE 299 328639 - 329715 1768 358 aa, chain + ## HITS:1 COG:BS_ycdH KEGG:ns NR:ns ## COG: BS_ycdH COG0803 # Protein_GI_number: 16077354 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus subtilis # 2 357 4 315 319 159 30.0 1e-38 MKKKNIFMALALALAVTGCGNQAKESPKTETKQEEKTEKQAESKVIYASFYPIYNLTKQI AGDKFDVKAFNSLTTESHDFEPSAKEIAELSDSKLIFMNGAGMEEWKDAVEGSVGIEMVD TSAGLDLIKADHEDADHDHDHEDKDHEDADHDHDHEDKDHDHEDKDHDDHDHEDGEEEHH HHHHGEFDPHTWLSPINAKAQAKVIADKLAEIDPANKDYYEKNYEKIAKEFDEIIKDYKE KFEKVTNKKFIVPHEAFGYVARDFGLEQIPLASLTSTADPDAKVMKEVTDLAKADKIKTV FFEKGGSDKAAKTIADEIGAEVAPLSTMEFATQEEIDKEVTIQEIIKENLENIYKSLA >gi|229269865|gb|GG666046.1| GENE 300 329723 - 330382 253 219 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 201 12 204 318 102 33 3e-20 MKQIEIKNLKFGYNENLILKGINLDLDEGDFAVISGENGSGKSTLIKLILGELKKDSGSI KLFGIDMEEFKNFDKVGYVPQVNEAIKVAFPVSAREYVGLNLYKEFSIFNTITKKSKLKI EDTFSTLKIKDLIDRTVNNLSGGQAQRVMIARAMVNNPDILILDEPTVGIDQKSKEDFLN LLVHLNRHHKISILMITHEMDILGDYVDKVFKLKDGLIC >gi|229269865|gb|GG666046.1| GENE 301 330376 - 331191 930 271 aa, chain + ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 252 4 255 268 148 35.0 8e-36 MLSYDFMQRALAVGVMLAVIIPMIGLVMINRKTSMIGDALSHSSLAGIAMGLIFAINPMW TSLVFCVLGAFAIDIIRKRFKDFGDMATAIIMSFGIGLAAILSDFSPGGKSFESYLFGSI TTVSKEDVILVGIIFALVVTMSLYFYNALLFISINPIMARLAGVRVGIVNGVFTFLTAIT IAISAKIVGALMITSLMVIPVATALLMSDSYKKTYLISLIFSVIFMLIGITLSFYYGLKP GGSIVMIAIGTLLIVAISKKIRGKIKKMTSK >gi|229269865|gb|GG666046.1| GENE 302 331516 - 332373 523 285 aa, chain + ## HITS:1 COG:FN0640 KEGG:ns NR:ns ## COG: FN0640 COG1266 # Protein_GI_number: 19703975 # Func_class: R General function prediction only # Function: Predicted metal-dependent membrane protease # Organism: Fusobacterium nucleatum # 19 281 20 288 293 79 30.0 5e-15 MVNKNKIKNFLKIILRIFVLLLAIAVFTGGIMLALSLIFYGKTHFNSDYKNANLVMLMGT TGQLLAGIFFVKFILKKKIDYIFFKKEDLAKNICIGLFLGLLQISIYVLLDMGRGVLGYS GSSFGNFNLIFLAYFIGFFIQSTSEEVLVRGILTRVLSDKFGRNVAILLPSIFFGLLHLG NEGVTILSTLNTILVGIFFAKLLFYKGNIMLTSGVHAGWNFSMAMIYGLNVSGFSGFDSL LNFKILNYNLYDEIYGPEGSIVVTFIEIISIFIIFYLERRKEVNK >gi|229269865|gb|GG666046.1| GENE 303 332728 - 333774 863 348 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486413|ref|ZP_03916729.1| ## NR: gi|227486413|ref|ZP_03916729.1| hypothetical protein HMPREF0072_1816 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1816 [Anaerococcus lactolyticus ATCC 51172] # 1 348 1 348 348 630 100.0 1e-179 MTFVIIIIRGDGMNLEEKILRISRVKYGENPFIEDRIKKEMEVIRGKSSEDEIDFLLFLK ENLDQNILIENLPFFSFYLLGLSLINPLPAHYYNEKTKELIFVNEVEYGVDLEKKDGFSR DGFNIDLSYIFENKIYFEVQIDKKYEDRVRFWVLEYYDYGPGYLWCIYKGMEKCGLYFTH FIYLDKLNPLYYEKNIYQDIDIEDFKDYLFGYYLNEKIELKNVYPRKATESLENFDYEEN IRSFGDFIYLLGLTKTFTRAYSLFIDFANRNYPSNREEIFAYYLDHGLDRERAAKLACDI SFSEASNLPEINPEIDDYLKKITHTWDKTSLVKVTLYSYLDYKINALI >gi|229269865|gb|GG666046.1| GENE 304 333797 - 334762 867 321 aa, chain + ## HITS:1 COG:no KEGG:Selsp_0969 NR:ns ## KEGG: Selsp_0969 # Name: not_defined # Def: hypothetical protein # Organism: S.sputigena # Pathway: not_defined # 2 314 4 318 328 165 32.0 3e-39 MASSRLNILYILEILREESDSDHILSMAEIRKKLFLYYGVNLDRRTVTSAINDLIDFGID ISTFTDNGLGYYLIDRDFEKSETYLLMDAIFSLAYIDRDQCTELLRKIGKSQSKYQRSVD KYISQTDFYRTKRTSNKEVFLNIEIINEAIEENRQIEFTYLTYGPDKKLVPKRKRPYKLN AYRILADNKKYYLLGTTPGFTNILSFRIDFIKDIKILDENRDSFREDELNRLIEKASHAF FGKPSFIKIRFDKDILTYVIDQFGTDIKLREDGDYYLGEFMAPEKGIEYWALQFLPYVEV LEPVSLRESVIESVKENLYGI >gi|229269865|gb|GG666046.1| GENE 305 334772 - 335749 856 325 aa, chain + ## HITS:1 COG:no KEGG:Vpar_1397 NR:ns ## KEGG: Vpar_1397 # Name: not_defined # Def: hypothetical protein # Organism: V.parvula # Pathway: not_defined # 1 318 1 327 332 196 38.0 9e-49 MTTVWRLHANTDSDDEKKISGYMLNEHIMAIGWSLKDSHLRGTIKEEDMARVCKERNDIK TIDDYDKFCYEYKIYKNGVNANITRFTREIEEGDLIWMRHEGIYYLGRFSSESIVGYYPS EETLKKDACIQIRNIDWIPIGDESVVPGAVTTALISRLTFCRINEEGVKEFSKYIYDKIA GTNYYMNTELTFNQENFYKSISTSDCEDLLCMYLNKEYGYVVIPSTNKKSTELYECVFLD PKTGKNIFIQVKNGNINAEEYLHLTGDVYLLSTFGSIDNYDEKYENIKKVDPKELFNYLS NEDFQNYLPQSIKYWIELFGGYKKN >gi|229269865|gb|GG666046.1| GENE 306 335806 - 336534 845 242 aa, chain + ## HITS:1 COG:PM0066 KEGG:ns NR:ns ## COG: PM0066 COG3022 # Protein_GI_number: 15601931 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pasteurella multocida # 1 237 1 254 258 117 33.0 3e-26 MKIIISPAKGFKHFDNIKTEELLFPEKTRILLDKVRKLSMNEMGNLNRTNDKLTEKAYYD FQDFDFNDLTNPALFSFDGLVFKQFSMEDFDDIDYLNDHVYILDAFYGLLKPMTGIRDYR LYFDNTMYDLYEFWGDDLYKKLFEDGDLVLNLASKEYTKTLMPFLKETDKFLTVDFKENR DGKLKSVVSYTKQARGAMLREIISGKIEDVEEIKGLDVNGYVYDPYNSTKDTLTFVRKGD EK >gi|229269865|gb|GG666046.1| GENE 307 336531 - 337652 1148 373 aa, chain + ## HITS:1 COG:VCA0520 KEGG:ns NR:ns ## COG: VCA0520 COG0420 # Protein_GI_number: 15601280 # Func_class: L Replication, recombination and repair # Function: DNA repair exonuclease # Organism: Vibrio cholerae # 1 368 1 372 379 182 29.0 6e-46 MKLLHLSDLHIGKSLGNFSFLEDQKYVLDQILDIIEERKIDAVMIAGDIFDTAVASADAL DLYNYFIEKIIFDIKIPVLAISGNHDSAKRLDVNKRFYKTNKYYLAGEYTKEVVTLEDEN GPIHFFLLPFMSLAKARVIFGEDLADFTDLYREALKDYKYEDRNILITHCYATEFNQSLE KDYNEGQKPLTIGGSDCMDAGLFMGFDYVALGHLHSAHYVLDPKIRYSGTFMPYSFDKKD NNKSVTIVDLGSESIEIEKIPIKLLRDFEVRTGFFDDLIGEPASDSYIKFILEDGATIEN AMAKFKKKFPNAVLINYASRSVFAMNDEDINIDIENKSTLELFEDFVAYKDKRQMTADEK TVLEDVIGVINEG >gi|229269865|gb|GG666046.1| GENE 308 337642 - 340680 3185 1012 aa, chain + ## HITS:1 COG:lin1686 KEGG:ns NR:ns ## COG: lin1686 COG0419 # Protein_GI_number: 16800754 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Listeria innocua # 1 998 1 1008 1023 218 25.0 7e-56 MKVRKVKLRGFLTYKDEVTIDFTRLFDKKIFLISGPTGSGKTTIFDAISFALYGEVPREI AMEDLRSDYLSEDDDFTYVDLEFSLADRVYKIVRIPSQRAVELKNPKNIGHRVELYDITG EKTLIADKIKEVDERIKDLVGLDKNQFSKVMLLAQGQFQKFLISKSDEKAALLSDIFKTD ALRAIQDELKKRANENKKMLAQVDKDLANVLSDNELLQGKISEDLILRRDFENIFQIIAQ TEADQEGFLKEILKSLDKLKKNEKNLISDLEKAKTLNENIVKYKKSEETYQALLVDFDKN TDLKRDLDLLFYALSIKIYEDRLEKTKADLGDFEENKLGIEKNLAKKNQALVEVEKEVEK LPSLKNKLDQAKISHSKKVKEIADLEEFLRVKKSYEAIKDLDKDLERLQTEIKNDERNLD ELRNLYDIISKDLARAKEEDFANKEKISEIKTRLENLAKDYQKIKENKTYEEKLASLAKD LEKTENLKNKADEDRENLEINKLIDRLNAEGLCPVCGKAHQGEREKLAVSDLDLEKISQE LADIRIDLEKTKAIYERNLKDLGTAYKLGEIEKIIADNKDLLKSYQDLGGKTKEKIKTLT EKANEIGKKGVDLKKAREKKEKACEEISAKLKNLADLKIKYLSGEKTMAGLDMAKLLGEK KSLEEEISSTTTFIKDKEKAHQDLVLAISKQKASLAALIENIAKANEDLKTYQKDFEDKL KEKFENLEAYMAYLSREGELKAQKDLVETYFTDLAREKTTKENFSFFKDKAPEDLFKFED DLKEVTREIKVLDDDKIKLSTILNSIKKDEGKIKKIHASYLSLSKTAQIVSNLSDLANGQ TGGVKGLERLDFETFILSVYFDRVLNFANLRFNQMTDGQFSMVRKTEAVDARSKMGLDID ILDSNTGKKRPASTLSGGENFLASLSLALGLSDEIGAENGGIRIDTLFIDEGFGTLSKEF LANAIETIEKLSKENRFVGLISHVDELKDAIEAKILITYDPSQGSSLEIVDD >gi|229269865|gb|GG666046.1| GENE 309 340673 - 344020 3636 1115 aa, chain + ## HITS:1 COG:CAC2263 KEGG:ns NR:ns ## COG: CAC2263 COG3857 # Protein_GI_number: 15895531 # Func_class: L Replication, recombination and repair # Function: ATP-dependent nuclease, subunit B # Organism: Clostridium acetobutylicum # 2 1099 3 1125 1153 356 25.0 2e-97 MIRLIISEVAENASSYLYKKIEERLDKGKKSILIVPEQYTLETDINFLEAVKYKAVMDAK VLSFSSFASFFMDNFTEGKLEFLNKEGKVLLLTNILQDLKDDLKLFENSYQNIDFINSIV GLISNFKDNNFDEGFFASIFNSDISEISKIKFEEIKLILDTYQKELEGKYFDKEDILSFV AANLDKTDLLDGYEIFIDKFDFFEERKLDLISALYNKGLNLNISLNIDPKFISNPLVRPE IFDGSARTFDLFRQDFESEVINLPSNPKTVDLDHLRINFETYRPAPFEKNPENIKIYESI STKSEVTNMALLINKIIKTNPDIRYKDMAVYLTDPDQYENELIKTFSRYEIPIFLDKRRK MADNHIIKTFLALLRLKVNNFRQEDLFYILNSKLIGISDKDANALINFLTYRKIKGSMFE NDKYFAMDEDFYEKNLVNDPKKDEKIAKKREEYDHVNLVRAKILHLTKGLDKKNMTVKDL ATKIFKMIADSDIKKSINAFQAKLLENADLDDYKENEQIWDEFVAILDQLVLLMGDRSLP LSRVVTIVEAVTRDIQIGLIPPSKDHLIVTDFARDRVSNKKINILLGMDDAYFPSQKAKD YLISPDEMEELEKAKIDLKLYAKDRDRAELLSLYKIISRSDKLIFSYALSDKEGKDLNES LVIRDIRKIFPKLKKNILLDPRAEDAIFARESLKKYTLAVLNKLANKEKITDKDKQIATA FMEYLRENQEKDENKLTYDKVKKGLFYTNDKLALADELRKVLYKKHAYSVSEIETYSACP YKHFIAYGLRPDVEKEFDVDALDIGNIVHKSFEDLSRLIKDMDLDEVDFSEIDKLLDEKF NEGIDENLDSTRKDSPKNKYILKNINQAAKRNTRQIVDQLKRGDFKLEYFEQAFDKGGFF DPVYVDEENYLRGRIDRIDMAGNLVRVIDYKTGSKAFNLAAILNGKDLQLIIYMIAVSDD KKNLEPIGAFYISLKDEIENFGDSIADEEKISASLDKKFALDGILLDTDGKALTLMDRQS NGKTSSIVRNRKSYKISKEDFAKLSDFIKNMVKDLIKDIKAGKINLAPLREDKNYSSCTY CDYKGICKFDKTIDSFRFRDMDKNLTIEDLEAEND >gi|229269865|gb|GG666046.1| GENE 310 344013 - 347378 3611 1121 aa, chain + ## HITS:1 COG:SA0828 KEGG:ns NR:ns ## COG: SA0828 COG1074 # Protein_GI_number: 15926556 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) # Organism: Staphylococcus aureus N315 # 7 1119 13 1216 1217 390 28.0 1e-107 MTELRLTDGQRTAIYERDKNIIVSAAAGSGKTMVLVNRVISMMVEEGIDIDKMIIVTFTN KSAQDMKDKIREALEKRATDFDPAFIKRQFKLLKLAQIKTLHSFCSDMLRENFYYLDKLS PNFKVMPDSTGKIYMADAIDEVFDRQYEKMDPDFVYFLQNFSGERSDYNAKQIILLTYQK IVGMIDGLKWLEEAKDRGENLGYFKDFIRHRFDLTLQRIENLGARLNPILPATAVNLLAE DYEMLAGIRDQIDDWDNFSKALANKKYATFAKKIKTEIGDDDLVNEINSARDAYKAEIKE LEGLIVNTDAKALDFIRTKEDVLFRELYKLTKDFKETFDKKKSAKDYLDFNDLEHEFISL LDNQTAREKLRAKYKYIFFDEYQDSNEIQNYIVDKLKSDRNLFFVGDVKQSIYGFRRARP DLFIEKLDSYEKEKESMRINLNENFRTDRLILDFNNYIFDRLMTKEMADIDYKKGGHRLN YGKEEKDLLDSARVGVKVLAKSVREETYLASLIKDLLAEGYEYRDIAILLRNGTESYKYE EAFKKADIPYFNDISKVSTQASEVGFFINLLKYLTNPNDDIILLSVLRSVIFDIDEDDLA RIKLAFASYKFYEAFDAYNKEDELYEKIKKFKALIEDLKDKLAILNLYDFANYLFEKSGL YDFLLARDLAEDRINNIDSVIDMMADYDSVNDNGLYGFVNFFANLESTRSDSITPTRDLS EGEDLVRIMTVHKSKGLEFKIVILAGADKGFNKQVDPIIFDEKIGIGINVADYENKIKIP SINRKLIIEKSREDDKKEEMRILYVALTRAEERLYITGNFDKNSSAFEKVYKNESYLTLN SHLEWIMASLSFDNITSEFFTGVKKQSTFDKRISFDFIEDVPDLSVSHNESLYDILNEKA NTKILKQIQTKLDFTYPGKDDIRKSLKKSVTELAKDFNAESDGYETFDAEGFSRNISFKK PSFMEEKKAYSPTEKGSLIHKIFQKLPMKVYTAGTLENEIDRLIEKKIFDKTIKEIVEID KLLGFYTNSLIAELIGENIPKRSEESFLMTYDGYYVNGQIDLIFEGQDEIILIDFKTDMI KREDTYQTQLAIYKQAIEEALGKKVTKSLIYWYNFKDFQEI >gi|229269865|gb|GG666046.1| GENE 311 347557 - 348285 236 242 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 2 239 4 238 242 95 30 3e-18 MKTVLITGSSRGIGAATARRLAKSYKIVINYNKSKDRALALLAELRQINPLVIAVKADVS KEDEVCAMFDIIEKNFGSVDILINNAGISYFSLIQDMPFEKWKELMETNLNSVFLNSKRA IAKMVEKKYGVIINISSIWGDFGASMEAGYSASKGAINVFTKALAKELAPSNIRVNAIAP GIVDTDMMRKDFDDAELRDLKNEVGLNRFASPDEIASLIEYLISDDASYITGDIIHINGG FN >gi|229269865|gb|GG666046.1| GENE 312 348553 - 352101 4617 1182 aa, chain + ## HITS:1 COG:no KEGG:Apre_0739 NR:ns ## KEGG: Apre_0739 # Name: not_defined # Def: YSIRK gram-positive signal peptide # Organism: A.prevotii # Pathway: not_defined # 1 1005 1 1037 2035 493 38.0 1e-137 MKKYQTAKELLATKAENKEKKPIYATRKLSIGLVSCMLGLLLAAPNARAEEVPPAPGVEA AGQQEAPAKVEEDLLTDEEIQAIRDKANNQENDYYFNGNMVDELKAELRKAKADPSVNYE GAKARLIKEAIIKNTPAKKAPGQDRVIKKFQIKAADKLEAEMTEITVQGLGMEEGQKIEV LVNGVVKGTFTQPKNVKRSVPITLPAALQAGDKVKAVLKGSDDVQIAETEVATVKKKEPK KAEKYKDTLKMPTGEIWIEDTAASLPHSIEKNKALEMFWEKNADLKGDIKSVDFSINGDT NAYYKVTFDDKSTLKVEATKLKIKNPTEITPQPEIQQTFVADGNIVIKLKQKVAKGTAYG IVRQFTNDEPNKGYCNGTCKLDKTTTTWSTLDQETDTITYPVDKDFLQYGQKFGVVVKEY GKKSSCQSKSPEIKIPDLTGVRDPKKLTPEEKKTIDEAIRKANTRKDGASKLPDGFGGTV PAIIDISDDGNVKIINPSDVDGDWVDGNFVPKRNPDGSIIPAIGKQNPGIPIENTKIIEN KAPEKPKVEVIGENVVVTPDNKDTDAKKVSVTYETPDGTKKTIIATKDSATNKWSVPKES DGTVDPDSGKITLPVNKVKGGSEVSASVTDDGFKANNQNPATSENGATTLPKVKTKAEQI TELGGLDPVVMKKWVGDVIGEGFWKDGVKVKEGVSAENKKKIDDLLAGAKFDDFQEDASK EKRNTDKANNTTGFVGKIKVTLSDGSELVVENQTLYVSDHVTWFSKEKTPGGRVVFNENA PNDAIVAEFKLGKGTKIDNADGKTAIEGKESPVSYQKYKVKPGTDLKTYVHPTLQSTIYE SINKKVKEQDDFIDPVWNTDNFKVTDSNKVFTATATEAFKVTVKPDGGTKAGGGKAEDIV TKVKKNGTYTLPAANTFNPPNENQEFAGWKVGDKEGVKKPNTPIDVKGNITITATWKPKS PGSGSGSGTGTGSGSGTGTGTGTGTGETATPGTTPEPSQPGNTPDPTPGSENPKDKPTDP AKNNPDPKDKPEDKKTGEDNKNNPKTPNVEKGDKVINVGDKEVVVPKVVVDKKKGKLDKE ERTKIAEKIKQKNPDIVDVKIDENANAYVTFNDGRRERIPAKDLVSKEGFVIPRRDRHSQ DESPNRRRAGKNVKTGVESIAGIACTLVASTGALYIGRKKED >gi|229269865|gb|GG666046.1| GENE 313 352494 - 352784 234 96 aa, chain + ## HITS:1 COG:NMB0047 KEGG:ns NR:ns ## COG: NMB0047 COG2827 # Protein_GI_number: 15675987 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Neisseria meningitidis MC58 # 1 95 1 94 94 79 43.0 2e-15 MAAYFYMLANATNEVLYKGSTTNLIRRIYEHKEHLLKDSFTDKYNVTRLVYYECYDDIQS ARAREHQVGKWSRKKKDKIISKMNPKWIDLYWGLLG >gi|229269865|gb|GG666046.1| GENE 314 353137 - 353379 64 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSFHSLSRNKGGVVENSHHLVSTERSERRDLLLSLSCRYGKGVKLSFKAKIFLQTKPQV PTGANPCLVQRFLRAFVSLT >gi|229269865|gb|GG666046.1| GENE 315 353645 - 354799 1429 384 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 1 382 9 373 374 218 34.0 1e-56 MTERFLTVGSLLRNEELLKYKREIEKRDDITYPFYDDFAGYKECEDKAVADVVERQIEAG LPEITDGEYSKSLWHLDFVWGLKGVERYIKENGYFFEDLDSCGKYETRRDIGLRLVDRLQ GKNHPFIDHFKRLKKLVNGRAIVKQCIPSPSHIYGDVLNFNFLQDSYYQTTEDFEKDLIR SYKEFLEDFKNAGGKIIQFDDCLWEQFADESENAQFDGNARADKNIALAEKYIAINNEVI DYGHDLGLTIYTHNCRGNYASRHFGAGTYDSIADLFLEKQHYDRFYLEWDDERAGSLNSL KAFEKNKNAEIVLGFLSSKTAGLDDEKRALELLDEAAKIIDKDRLYLSHQCGFASCDNGN ELSQEEQWAKITQGQQIAEKFWNK >gi|229269865|gb|GG666046.1| GENE 316 355225 - 355758 740 177 aa, chain - ## HITS:1 COG:BS_yqgN KEGG:ns NR:ns ## COG: BS_yqgN COG0212 # Protein_GI_number: 16079545 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Bacillus subtilis # 1 176 1 182 187 87 31.0 1e-17 MKSEFRRFFLNLRREMGEASIKEKSKKIIARLLASDPYKNAETIFVYVSKNNEVDTYDFI KKALADGKKVYVPKIIDHQMIAAKISDLDELKAGAFDIPTTDSLEAITNPDLTICPGLSF DDDKNRLGYGGGFYDKFLSQNKTSKIGLMLKEFRSIKIPADPWDIKMDLIITEDKIF >gi|229269865|gb|GG666046.1| GENE 317 355748 - 356725 972 325 aa, chain - ## HITS:1 COG:SMb21363 KEGG:ns NR:ns ## COG: SMb21363 COG1295 # Protein_GI_number: 16264688 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Sinorhizobium meliloti # 2 286 64 330 364 100 26.0 5e-21 MKIKKHKFKDFIKNFINRLKTQDIMTYASALSFYFLQASIPLMMVLVSVASTFLKGNEKI IYEFLNLFPKTTARLIIKALDIMFASSQSTAVTTVTILFALWSATSGVDKLIMAINHAYG LGHQAKAIKQRLMSIIYTIIFIAFIMFLLIFQIYGPTIINILDSKILTITGKFFGDNLES IIDFISSPIFTILTIAIPLLIMSAALGILYKYAPGNSANRIPFKQALTGGILATGTIYVA SFAYSYFINNFSNKSLIYGALAGILALFIWLLIVSSLLIIGAELIAAFREGYRDEYFDKE INPTINAENPMNKFVSKIKGKINEK >gi|229269865|gb|GG666046.1| GENE 318 356706 - 358625 2375 639 aa, chain - ## HITS:1 COG:FN1128 KEGG:ns NR:ns ## COG: FN1128 COG1506 # Protein_GI_number: 19704463 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Fusobacterium nucleatum # 3 633 5 660 660 428 39.0 1e-119 MTQINDLFDYEFLSGIYVSNDDNKIAYKKTQANLKDNKYDTDLYLYEKDLGKSYRLTDKK SASLCSFDGNSNLIYKYDSDDCYDYFYKNDGYGLGELAFKIDKDVKSLKWLKDDTYLLSA SPKKSEEEKKAEKENEAYEEVTTLPFWLNGAGYLKKETVYYYLYDLKANKLTEIIKSDKD NEVSGLDISEDLGKIAYVRSHSDANDVMEFRESIILKDLKTEEEKILVDKGYATYTLHFI EDRLIFVGTDMKKGGINEDAFIYEVDFDGNLKMVNDENFDKSFGNSIGTDARAEGNRTFQ VHKNRLYFIATEFEEAKLYSIDLKGDLRKELDGCVEGFFVTDEDIYYLEMGPDHLAELKI KSKDQSLISNKIENVLPIEEFTFDSNGDNLRGYVLLPKDFDPKKKYPTILSVHGGPKTEL SDIFHHEHQMLASNGYIIIYTNPHGSSGRGVKFSDIRGHYGDIDFDDLMNFVDLAIKKYP QIDKDKMGVYGGSYGGFMTNWTIGHTDRFKAAVSQRSISNWTSFYGVSDIGYYFATDQTG ANPWDSLEKMWDQSPIKYANKAKTPTLFIHADCDYRCPLEQGIQMYAKLKLNGVDTRMVV FHGENHELSRSGKPKARVKRLTEIKTWFDKHLKDENKKA >gi|229269865|gb|GG666046.1| GENE 319 359103 - 359642 585 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228003432|ref|ZP_04050421.1| SSU ribosomal protein S30P [Anaerococcus prevotii DSM 20548] # 1 177 1 176 179 229 65 9e-59 MKLNIKAKNFTLTEDIRIESEKKFDRLDKYFHDEEDMDLKFAKEGVGYELEATMFLKGGT ILRAEAYEETFENAIDRVIDALVRQIRKHKTRLQRGRQTGDSIKFEAFDAEEKANEKEEE IKIAREKTIPVKPMSAEEAILQMELLNHNFFVYEDAEDMEVRVVYKRKKGDYGLIVPTK >gi|229269865|gb|GG666046.1| GENE 320 359773 - 361302 1500 509 aa, chain + ## HITS:1 COG:CAC1765 KEGG:ns NR:ns ## COG: CAC1765 COG0606 # Protein_GI_number: 15895042 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Clostridium acetobutylicum # 7 505 8 503 506 464 47.0 1e-130 MYSKTNTTSLIGLEGKLVEVESDITSGIPAFNIVGLPDSSIKESKDRVRVALVNSSYKFP AGRITINLSPADLKKEGTQLDLPIAISLLSSMGAIERAYDDYIFLGELSLDGRILPIRGA LAMVISMREQGFTKFIISDENKEECAIISDIEVYPFNKLNDVVAFLNGDLKKDSYKINPA LLKEEISYDLDFKDLKGQENLKRALQIAAAGGHNLLMVGPPGSGKTFSAKHLPTILPDMS FEERVEVTKIYSIMGLLDSGHLVSARPFRAPHHSSSQVALIGGGHSVPKPGEITLAHRGV LFLDEFPEYQKNVIEALREPLENKEINVARAQASVKYPSDFILIAAMNPCPCGNYGNPLK ECTCSINEIRRYLSKISSPILDRIDIHIEIKPVKYDDLNDDIKSKSSSELKSEVVRARKI QAERYKDEKIKTNALLSTRQMKKYIKLSPEVEKIGQMAFNKYNFSVRSYNKILKMARTIA DLEASEEITSKHLLEAVRYRALDDKYWSV >gi|229269865|gb|GG666046.1| GENE 321 361302 - 362486 1145 394 aa, chain + ## HITS:1 COG:CC0174 KEGG:ns NR:ns ## COG: CC0174 COG2804 # Protein_GI_number: 16124429 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Caulobacter vibrioides # 14 390 112 483 491 291 42.0 1e-78 MLDQRQIATDIDGFIENLIATAVNLSASDIHLQPEEDFGKIRLRIDGALVDKMQIRREYF DMLSSKIKLSCGMDISQKRMPQDKSVKYEAFPGIDFRVSSVPTILGEKIVIRILAVDIFM EKARLLGFSRESKEKLERAIRKKSGIILMTGPTGSGKTTSLYALLEKLNKEDVNIITIED PVEYKIANINQISINEKIGLTYPVILRSILRQDPDIIMIGEIRDRQTAEIAIRAAITGHL ILSTAHTRDAFSGLIRLKDLGVDDYLIRSAVNLLAGQRLVRKLCDCKKLDRMTDFEYELM SSYIKVDRERKIYRPVGCPHCNGGYKGRQAVEEVMPIDNEFKDILRKYGLESEKIKEKLK KDKYRPMIVNGLIQVLEGETSFEEVLDVLGYFPK >gi|229269865|gb|GG666046.1| GENE 322 362600 - 362854 445 84 aa, chain + ## HITS:1 COG:no KEGG:Lebu_1178 NR:ns ## KEGG: Lebu_1178 # Name: not_defined # Def: prevent-host-death family protein # Organism: L.buccalis # Pathway: not_defined # 1 83 1 83 85 74 56.0 1e-12 MLAVNYSEIRNNLKEYCDRTIDNLETVLITRKNDRNVVMISLEEYNNLVENAYVMSNANY YKDLVQRAKDVEDNKTIQRDLIEE >gi|229269865|gb|GG666046.1| GENE 323 362851 - 363108 152 85 aa, chain + ## HITS:1 COG:SP1740 KEGG:ns NR:ns ## COG: SP1740 COG4115 # Protein_GI_number: 15901572 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 1 84 1 84 84 80 45.0 9e-16 MKILFHEKAFDEYLYLQKNDNKTLERLNNIIKNIKRNLYEGLGKPEPLRYALQSYCSRRI TLEDRIIYKVENDNLIIISCAKHYE >gi|229269865|gb|GG666046.1| GENE 324 363126 - 364424 1314 432 aa, chain + ## HITS:1 COG:no KEGG:Apre_0745 NR:ns ## KEGG: Apre_0745 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 34 404 42 408 435 150 30.0 9e-35 MRKLVKILAVLFAIIVGISLSFLLRSKKIHFDYEINPKYYSEDQSPFENDFDYAFDTLEK YYALFDRNGTYEFLENRDEYKKELKNLRTDKEFFDKMNKILGDLDDDHTNLLDIEEVYDM KDTFVLSNKEEKGEVNVDLINYLFGAKISSLIDKIFRQARAATKNLITQDINKDIAYLKI RAMIDPGTPDFEEDLELLKTYLKKSKNKKALIIDLRGNGGGNAAYTCDYLYPMILGTKDF KETHEYILFRTDEVFKYDPQYPELKSLISKIRESDFKYMEENIPFLKKDKKMMDNIRKNY THIIYDAGYENAGDFGDEYKFNGNLYLLVDRGVYSSAQNAAHFFRDNNLGTIIGEKTGGD GIGTSPAMVKLPNTKYILRFSHELGLRETESMEESTYTIPDIEIPQKDQSEIPSNDGCVK KVIELEGKNAAK >gi|229269865|gb|GG666046.1| GENE 325 364568 - 364993 614 141 aa, chain + ## HITS:1 COG:CAC3714 KEGG:ns NR:ns ## COG: CAC3714 COG0071 # Protein_GI_number: 15896945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Clostridium acetobutylicum # 1 137 4 146 151 70 32.0 9e-13 MANLIRKNNSLSRYNDFYDMVDSFFNSPVEKDVFESSFKLDVAEDDDKFLVEAEMPGIDK DSIDIDFDRGQLTLTVNSHTENTDEKKNYIHKERKSTRMTRTMYFGDIDEENIQAKLENG ILEIEIPKRKEEKTNKKIEIK >gi|229269865|gb|GG666046.1| GENE 326 365099 - 365794 565 231 aa, chain + ## HITS:1 COG:BH2423 KEGG:ns NR:ns ## COG: BH2423 COG0020 # Protein_GI_number: 15614986 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Bacillus halodurans # 1 231 22 256 256 250 52.0 1e-66 MTELKIPNHIAIVLDGNGRWAKKQNRPRTSGHKEGAENVVRIAKACKKFGVKTITLYAFS TENWKRPATEVGFLMDLLIKFVNSKLKELIDEDCKLNFLGDLSKLPEKTRESCTYAKEIT KDNKSLTVNIALNYGGRDEIVHSFKQIIEKGYGKDDITEELISDNLYTAGLSDPDLLIRP GGEIRLSNFLIYQLAYTELYFTDVLWPDFTEDDLREAIIAYTKRDRRYGGI >gi|229269865|gb|GG666046.1| GENE 327 365791 - 366570 783 259 aa, chain + ## HITS:1 COG:SP0262 KEGG:ns NR:ns ## COG: SP0262 COG0575 # Protein_GI_number: 15900196 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Streptococcus pneumoniae TIGR4 # 7 256 8 264 267 106 30.0 6e-23 MIKFLNRAFGGAVILTLLILITYLGRIPLALGVAAFSYIALHEMDKALHKIDLHLPMKCL YLTNGIIMAAAFINNSDLYIASIVVSVLFLFMYIILRSHYTLYDAFAAAFVMLYVSFLIS HILRIKNVSYVWMLYITAWGSDTFAYLVGSLFGKHKMAWMSHISPHKTVEGSVGGIVGAT ILNIVYCHEFGLENYIREIVIFTIVAAIMSQIGDLIASYIKRQTGIKDFGNLIPGHGGIL DRFDSIMFIAPVLYLFSRV >gi|229269865|gb|GG666046.1| GENE 328 366580 - 367599 973 339 aa, chain + ## HITS:1 COG:CAC1796 KEGG:ns NR:ns ## COG: CAC1796 COG0750 # Protein_GI_number: 15895072 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted membrane-associated Zn-dependent proteases 1 # Organism: Clostridium acetobutylicum # 3 335 6 334 339 222 39.0 6e-58 MRIVLAVVLFLLLIVFHEFGHFIVAKKSGIKVNEFAVGMGPLIYSRKKGETKYSFRLIPI GGYCAMEGEDDESSDPRSFDNAPAFKRFLTILAGPMANLIIAIVVFTIVGLISGIITTKI GSFTENSPAQEAGMEVGDEIRKVGDRDIKDFADISAGISDFYKDKDYKKPLTVEYFRESS DTVTAVDLKVEVKDDHAYIGIMPARRSPNILEAVGLGFGETWKNVKMIFVILGRLFTGKL AFGALSGPVGVLKEIGNQAQNGLANLLYFLAYISVNLAVFNLLPIPALDGSKLLTSAIEI ITGKKIDKKIEEKVTMVGFFILLGLILVVSIKDIVNLFR >gi|229269865|gb|GG666046.1| GENE 329 367610 - 368668 1142 352 aa, chain + ## HITS:1 COG:CAC1797 KEGG:ns NR:ns ## COG: CAC1797 COG0821 # Protein_GI_number: 15895073 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Clostridium acetobutylicum # 2 342 3 343 349 353 53.0 3e-97 MRKETRKIFVGDVAVGGGSPISIQSMTTAKTSDVEAVVKQIKALEAEGCDISRSAINTIE DAKAIPKIKSLTNIPFVADIQFDYRLALAAVENGCDCLRYNPGNIGGRDKVALLVEECKK RKIPIRIGVNSGSVSREIVDRFGGVNKDSLVASAIEEVKILEDMDFHDIKISVKSSDVNT MIDAYRLLSSKVDYPLHLGVTEAGPLYQALVKSSIGIGSLLKDGIGDTLRVSITGDIVEE VRAGKAILKALGLRRDGVDIVSCPTCSRTSVDLPNIVAEVEEKARGLDINTKVAIMGCPV NGPGESKEADYGISAANGMGFLFKNGKTVKKVKEEEIVDTLIEVLKEEKNEN >gi|229269865|gb|GG666046.1| GENE 330 368658 - 373049 5290 1463 aa, chain + ## HITS:1 COG:BH2418 KEGG:ns NR:ns ## COG: BH2418 COG2176 # Protein_GI_number: 15614981 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Bacillus halodurans # 189 1459 164 1433 1433 1022 42.0 0 MKIDLAKLIKVEGNLYTIISATYFQKENLLEIKIKAANPLDSRLEKELRSYFSYVDLKII YEKIMPPSYDDYIPEYEGEVEYEDVRDNLNDVIFKEENPALKSVQPIENEPIVELVEENN QPIPVTDDKALEVFKSSQDGPLSEDEFAEDKQNPSESDQARQNLTPDDLKGAALEAEDLK ADEEEENDLGVEAKEETSSFEDLKKAKEAQLQRKIAQALNYQNKQKEKEEAKKNTDGLNF GRKIKAEPIQIEDIYDKKGMTNSLIGTIYGLSCLETKSGYFIYTFDLEDKTDAISCKLFA NKKNNFKLEDLKDGMAVQVEGVLNFDDYAKEDVFTVNSITIAIISKKVDLAADKRFELEL HSKYTNLDGFVDDGDLLPVLKEWGWDTIGITDTENLQVLPYVYDTYKKNGIRVLNGAELL LVEDDLRILTNLSGKDLPTFKNLEDGSFVVFDIETTGLLKYRDAITEIGAVRVENGEITE TYNQLINPERILPEKIVEITGITDAMLADKPKIDEVLPGFLDFCGDSLIVGQNTDFDVGF IRENAKRLGLKFDPIYLDTLPMARALFDDMGKFSLDKIARKLDIPAFNHHRASDDARATA QIFIKMYKMIMEEEGLNLSKINRLKTNYPKAKHETFSALAFAKDKTGLKNLYKLISESRM NYMANGEARTPMSVLEKYREGLVLGTGGAEGMLFEYILGDRSEMQIKKVLDLFDFYQVEP VSMFLDKVESGKIDSLAQVKEINQKIIDFGEERGKLVAATGGVRYLDPGDYKLRNVLKKG SFFFYKENRPLYYLRTTDEMLGEFSYLGDTKAYELVIRNPKKIVAGLEDIRPIPHGTFPP KIAGSEEMLRDTCFKKAHEIYGDPLPKIVQDRLDRELHSIISNGYAVLYIIAQKLVKKSN EDGYLVGSRGSVGSSFAATMADITEVNPLSPHYICPSCKHSEFFEEDLLGSGIDYPDKDC PVCGTPMHKDGHNIPFEVFLGFEGDKEPDIDLNFAGEYQPTIHKYTEVLFGEGKVFRAGT IGKIQDNTAFGYIKKYMEENNLNLTNAQVRKLQRGLKDVKRSTGQHPGGLIVVPDDIEVF DICPIQYPADDPASGNKTTHFPYRVMEETLLKLDLLGHDVPSVIRHLQDLTGTDPLKIKM DDKDVMKIFSCTEPLKIKHDFSNNDIGTLGIPEFGTNFVRGMLKDTYPKKFSEMARISGL SHGTNVWLNNAQDIIKSNTAGFNEIISTRDDIMNALIQEGLDKKKSFMIMEKVRKGKGLS EEEIDYMRENGVKDWYIDSCLKIAYLFPKAHAVAYCLMSYRIAYYKVYYPEAFYASYFSS KLGDFTYSTIISGLESVQMALNAYKEMFNISKRDQDLRTVLEVAEEMHAREIKISKADIY ESDATKFLIKDGAILPPLAAVDDVSEAMAKDIVEERAKGDFISIEDLTSRTSVNKNALKS LKDLGIIEGIQEENQMSLFDGLF >gi|229269865|gb|GG666046.1| GENE 331 373097 - 375334 1963 745 aa, chain - ## HITS:1 COG:CAC1534 KEGG:ns NR:ns ## COG: CAC1534 COG0577 # Protein_GI_number: 15894812 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 57 740 54 741 746 211 25.0 3e-54 MKNPIYKRAYRQVYFHPSRVLPIFIALCFIIIFSSSFFTAQDSTKKLYYELINQGKVEDG NFTCIDRLDEKVKKDLENKKISLYENFYVEANSGKNKTLRVFENRENINLPSILEGKLAQ TTGEIALSANYARANNLKTGDSLSLEGKDYKIVGLIALPDYSTLLKNNSDLVMDPGFFGV GLVAKDGLKNISEQITYQYSYKDKENLPKSKARDKQKDLLKIINKTNRVTDSLLIYDNQC IRYFIEDMGGDVPMMTALMVVLVLAIAFISAIQVKSMIEEEAPIIGTLLASGYKKSELVK SYMLMPIFITLLACLIGNLIAYTHAYQTYTNLYYKSYDLPKFVVSFNLRSFILTSLIPLL IYLIINFFVISKALNHKAIDFLRNTLKSPKARLRVKLEKFSFINKFRLRVILANRANIIS LIFGIGLANILLIYSLGVKPIFTDYAVKVKNSMKYDHTYLVKAPDPKIKADKISMLSFDL VDFNMKKIQCLGVDADSKYKDLAIGNLDKKDVIISNGLAKVYKLKVGDEIDAIENFNYDK VKLKIKSIDKDNNQFQILGKRENINKILGLDKDYFNAYGSSQRLSIDKNILINEINKEDM NKFMAHFLDSFGGVFDSLLVVTLVFYLIISYLVTSLIIDKSKTNISYLKVFGIRARESTA IYTNPIFLILLVFEIIMIPMMDFLIRTMTRYAITKLDAYVEINIPLISFIEAIGLSLLIF ILVQVLEKRKISKIDMVKELKIING >gi|229269865|gb|GG666046.1| GENE 332 375334 - 376029 325 231 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 214 1 217 245 129 36 1e-28 MIKIKNLCKSYGQGQAKIEVLKNIDLEIESGKIICILGPSGSGKSTLLNIIGGIESIDSG EVNILGENLASMSKKDLETYRRNKLGFVFQFYNLISDLNIFENIELGKYLAKNPLDINKL VDDLGIKDQIYKYPNEVSGGQAQRTSIARALIKRPEILICDEPTGALDYESAKDVLYLLE KMNHDYKATILIASHNIQISKMCDYILNIHDGKVKSYVKNNEKIQAKEVTW >gi|229269865|gb|GG666046.1| GENE 333 376191 - 377882 1487 563 aa, chain - ## HITS:1 COG:no KEGG:Apre_0602 NR:ns ## KEGG: Apre_0602 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 5 558 5 555 558 383 42.0 1e-104 MDRPKEKLYENRIANIQWAGAGNYDFENFIIGENIDGNPDFYINLIIGLAIKYLGEREIQ KLFDAWAYNFRRDRYDLALVYILEDFAYKKEVSERPVLKSLRIAYAQKFLDDKYDLQRRN LALRQNALYRLELIRMREILDAPTNNFSKKDLDLYKKLSLPADTDKTNVESRVISLFKTY LGYRESDLLKKIPSLNLSLFESAGMVSLERSNMPANFAGNMQKSHGIGSLILDFKIKKRK ESLAYIEKTFGKSLFDEKIRLGIERDLCTDSHKKSRLFYTRGITENDKDLDQDLNKKAIA RHLLKFKANKSAYTRAIAVLSKQIKLKLNLTSSLDEDLSNRGKLIPRLAYKAEISDKAKI FKKKNLQPDPTMKVDLLVDGSASLLEKESEVAIEAYILAKSLENNSILNRVVSFQTVGDF TILTILKDYDEKAEIKKIFRFKAMGWNRDGLVFRAYRAILDKDIKDSLSLILTDANPQDL KPLITKNFRLNKPYQDEIGLFDARKNLDDLRKKGLQIAAIISGDNLDNAKSLYRNKFIKI DQPTEIAKACGKFIKKQIQSLEK >gi|229269865|gb|GG666046.1| GENE 334 377875 - 378759 922 294 aa, chain - ## HITS:1 COG:BS_yojN KEGG:ns NR:ns ## COG: BS_yojN COG0714 # Protein_GI_number: 16078999 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Bacillus subtilis # 2 282 20 303 304 135 33.0 9e-32 MENFNKKIDEFKNKYPIDSDLVERIPKPKFLYMGDDVLEEAIAAILSGKNILLVGEKATG KNVLAENLAYLFARPMWNISFHVSVDASSLIGDDTLKSGSVTFREGPISLASRYGGFAVL DEINMAKNEAMAVLHSVLDYRRRIDIPGYKLINVHPATRFIATMNYGYEGTRDLNEALLS RFAIIKMPRISDSDLVNLIKTHYPDLKDRYLTDIANFFKDLKDKANAHEISDTAPDLRGI FDGLDLVKEGLEFKEAMRLCLVNKIFDDYEADLIEDLLKARFPDNIYQKDLING >gi|229269865|gb|GG666046.1| GENE 335 378761 - 379075 416 104 aa, chain - ## HITS:1 COG:no KEGG:Apre_0601 NR:ns ## KEGG: Apre_0601 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 104 1 103 103 96 54.0 4e-19 MKFIITKTAKDFADKKNIREIYINPDLDSKETCCTIGTVDFDVSTKLIGNKEAYKKFSDQ DIDIFVNPNFFSFVKDDMEIEISAFGIGLFKKLYIKTEINTIER >gi|229269865|gb|GG666046.1| GENE 336 379136 - 380590 1889 484 aa, chain - ## HITS:1 COG:VC0687 KEGG:ns NR:ns ## COG: VC0687 COG1966 # Protein_GI_number: 15640706 # Func_class: T Signal transduction mechanisms # Function: Carbon starvation protein, predicted membrane protein # Organism: Vibrio cholerae # 1 469 1 474 494 317 41.0 4e-86 MTLFIIGLIILLGGGYFYSKYVESQLEPDDRETPAVRKADGVDFVVMSKTKNWLINLLNI AGTGPILGPIQGILFGPIAFIAIPIGCVIAGAVHDFMTGFISMRNGGSQVPKLVGKYLGS GIRAFYNVVIAILLLLTGVVFVYTPGDLIAKFVLGKDPEGAVIWIIYAVIFAYYILSTVM PIDKVIGRIYPIFGAFLIISAFGVLIGILTQGGGHLAFEGQGLLAQHPKGQKFIPAFFIT VACGILSGFHGSQVTLVSRTVKSEREARMTFYSTMIAEGFIAMIWAAGAMVLFSSGESAL DTPGTIMVGNISKYFMGNIGGLLAIIGVIALPITSGDTAFRSLRLIISEEMNIDQRNPAK RAILAAVLFIPAAGILYFAKTNPGGFNLLWRYFGFTNQFVAIFALAVATVYLMYTNKNYL ITLIPGAFYCFVVFSFIINADPIGLRQPYTIAYPVAAVITVLYVICVLKLGKKNRERIES IILD >gi|229269865|gb|GG666046.1| GENE 337 380846 - 381289 544 147 aa, chain + ## HITS:1 COG:ECs4051 KEGG:ns NR:ns ## COG: ECs4051 COG0779 # Protein_GI_number: 15833305 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 3 140 6 145 152 65 36.0 4e-11 MDLIEKLKNALESDIENLGYDLVDLEFIGGKDGNRLIFYIYKEDGITIDDCERVSGFLDE KLDELDLIKSSYYLEVSSQDLSRPLKTDKDLLRNKDELLKIKLKNGDLILAKMKDIKDES IVFAKEDGKDIEINKSDIKEIKIEIVF >gi|229269865|gb|GG666046.1| GENE 338 381301 - 382524 776 407 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 10 407 15 426 537 303 40 7e-81 MNKDFMLALDELCKDKNVEKEVILDALEKALVKSYQKNYDNQENVDVTIDHETGEIGVYA LKEVVDKVEDPINQINLKDAKDLDASLAVGDTARIKLVPKNFGRVAAQTARNIVIQKIRD AQRESLFGDYLDRENELITGLIQRVDKYNVYVNLDRIEGIVPLKEQVPTESYIPNERMKF LIKEVRNSGKDPQIVLSRSSENLVTRLFELEVPEITDGVIEIYSIAREAGSRTKMAVFSN DETIDAVGACIGYKGARVNSIVDSLQGEKIDIINYSKDIESFISNALSPADIIEVYVNER NKQSLVVVEDDQLSLAIGKEGQNARLAARLTGWKIDIKSKLEFDSLSQEEIDEILSINEE EVSDEKSTDDKDLEAYDLAEENASDDKDEEISDEDKEEISKEPTDED >gi|229269865|gb|GG666046.1| GENE 339 382553 - 382819 302 88 aa, chain + ## HITS:1 COG:BS_ylxR KEGG:ns NR:ns ## COG: BS_ylxR COG2740 # Protein_GI_number: 16078724 # Func_class: K Transcription # Function: Predicted nucleic-acid-binding protein implicated in transcription termination # Organism: Bacillus subtilis # 1 82 1 82 91 72 50.0 2e-13 MIKTRKIPQRKCIVCGSLKDKGDLLRIVNNKEEGILIDESGKVNGRGAYVCKDETCIKGL KKSNKLNQAFKMKIDDEIYEELEAYELK >gi|229269865|gb|GG666046.1| GENE 340 382829 - 384979 2703 716 aa, chain + ## HITS:1 COG:CAC1802 KEGG:ns NR:ns ## COG: CAC1802 COG0532 # Protein_GI_number: 15895078 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Clostridium acetobutylicum # 4 714 3 691 693 639 52.0 0 MADKIRVYELAKENGLESKEMIRILNDEFNLGIKSHMSMISGEDHKLINDFLSELNDDSS EDVSVEEEIIEKPKAKAKQEKKREKKIDLKNLDDDDDQEQVVSKKNRKKKNKKKKSKKSN RQEKSMKANKDSRIEIPETVNVKAFADKLGESPNSVIGKLIGLGTMAGLNDQIDFDTANL VAMEFGKEIFKEEEYDALEEQSYDLDYEDKEENLIERPPVVSVMGHVDHGKTSILDAIRN TSVTRGEAGGITQHIGAYTVDINGKAISFLDTPGHEAFTEMRMRGAQSTDIAILVVAADD GVMPQTVEAINHAKAADIPIIVAINKMDKETADQNRVMQGLMEYGLVPEEWGGDTIMVPV SAHTGKGIKDLLEMVLLVAEVRELRANPNRDAVGIIIEAQLDKSRGPVATVLVQKGTLRQ GDYVVTGSASGRIRAMFDSKGKPIKEAGPSIPAQILGLSDVAEAGDKIYAVKDEKIARDY ADRAKEFKREERLIAKANTNLEDMYSDIQEGELKELNIIVKTDVKGTVDAVSSSLTKLSN EEVKVTVIAGAVGGITESDVLLAQASNAIIIGFNVRPTQGALERAKDNNIEIRTYSVIYE AIEDVSKAIVGMLDPEFKENVLGRAEVRDTFRIPGAGTIAGVMVTSGVITRKAMIRLLRD NVVIFDGEISSMKRFKDDASKLQSGYEGGIGLERYNDIKVGDVMEAYEMVETERSL >gi|229269865|gb|GG666046.1| GENE 341 384980 - 385363 640 127 aa, chain + ## HITS:1 COG:BH2411 KEGG:ns NR:ns ## COG: BH2411 COG0858 # Protein_GI_number: 15614974 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Bacillus halodurans # 1 113 1 110 116 93 44.0 7e-20 MNKKRTARISSEVKREISKIIMDDLNDPRLSAEAMVSVTDVEVTNDLSYADIYISVLGDN KTKDGVMEALNQAKGYIKILIGERMRLRSMPEFRFKFDNSIEHGAYMDKLIAETIAKDKK ANEARED >gi|229269865|gb|GG666046.1| GENE 342 385344 - 386315 272 323 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149007035|ref|ZP_01830704.1| 50S ribosomal protein L31 type B [Streptococcus pneumoniae SP18-BS74] # 9 319 2 310 311 109 25 2e-22 MKLEKISKEHLDKFLEMVDKAETIAIASHVNPDGDNIGSSLGLRRSLEKYGKKVEVIAID TIDDYLQFLPELDHYKEASLDKYDLFIIVDCSEFDRIGKATEIARRSDKTIVIDHHVGGK INCDLNMIYETSPATCELVYEIIDRLNLPMDKTIGTLLFTGLCTDTGRFMYSNVSEYTFR AAGRLITDGIDYEYIYENLYQSQPVAVMQFHNEIISKAEFFDKKAFAIATKAQVEKYGVQ MGDAETIVNKLRDLREVNVSMIVKEYDDGEYKVSMRSKTADVAAVARAHGGGGHIKASGY SIFDESLEAACEKALAVLKEIDA >gi|229269865|gb|GG666046.1| GENE 343 386308 - 387204 1031 298 aa, chain + ## HITS:1 COG:CAC1805 KEGG:ns NR:ns ## COG: CAC1805 COG0130 # Protein_GI_number: 15895081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Clostridium acetobutylicum # 2 281 1 283 289 208 46.0 1e-53 MLKGILNVNKEKGISSARVVSLVRRALGMKKVGHTGTLDLEASGVLPIVIGKATRVSDYM MTKDKVYETELILGAKTDTLDAAGKIIAKSDKVVSRYEFIEAMNTFKGEIEQIPPMYSAL KVNGKKLYDLARDGIEIERKRRKVKVYDIDLLDFAFPQATIRVTCSKGTYIRTLVDDIGE KLGTLAYVNELKRVRVGDLDVKDAINSEDILKIAKKDLLKKLYPVDFALKDFEKIVLDKK YLENLVNGQLVEVADRFDKTVRVYAGEDFIGLGENYKENDKSFLKMEKVFYEREDKNI >gi|229269865|gb|GG666046.1| GENE 344 387179 - 388123 479 314 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762565|ref|ZP_02169630.1| ribosomal protein S2 [Bacillus selenitireducens MLS10] # 16 301 14 304 317 189 35 2e-46 MKEKIRIYDLNSDLPDLEKKVVSLGYFDGVHLGHQKLMKRNVDLSKKYGYTPSILLFKEN TKTTVKDDKRYLSSLEDKVEILSQLGIKTFCLVNFDENFMKLSPTDFIKTIIAEKLNAKI IIVGDDYRFGYKASGTVDTLREYENIFAYITDVVDFEMEDDHAKISSGHLRNFIRNGEIK KANKYLGRPYKIRGKVVHGKRRGRLLNFPTANLDLSFPYVIPTDGVYLTITNIRGKDYYG LTNIGSNPTFEEGDDKKIETFIFDFNDSIYDEDISVEFIEFLRPDFKFNSAEELIAQMDK DKENGLNYIEKHLK >gi|229269865|gb|GG666046.1| GENE 345 388196 - 388495 494 99 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486454|ref|ZP_03916770.1| ribosomal protein S15 [Anaerococcus lactolyticus ATCC 51172] # 1 99 1 99 99 194 100 3e-48 MAKALLNNTEEIMNAVEKQAIIKEYQLDEKDTGSPEVQIAILSKRIADLTEHLKLNTKDH SSRRGLYKMIRRRRGMLTYLKDNDIDRYRSIIDRLGLRG >gi|229269865|gb|GG666046.1| GENE 346 388544 - 390700 1555 718 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 12 702 13 706 714 603 45 1e-171 MIKNYKYTSKNGYDFEVTIGKYAEQANGACLIQSGDTTLLVTAVASEKPREGIDFFPLIC DFQEKLYAVGKIPGGFLRREGKASDEATLIARQMDRPLRPLFPEDYYNDVQIIATVLSMD HDHLPDPLTTIGASIALGISDIPFNGPVGACMVGKVDGKLVVNPNEEDRKKSQLELTVAG RKGAINMVEAGANELDESEMLEAMLLALDEIGDISDFIQTIIDDIGLPKKEVEVHEETEL DRLISEAFEEDIKSSIRTTDKTEREDNIFRIEEEAKEKFLEAYPESEDEIHRRIDNIMKK EVRRMISIDKIRPDGRELTEIRPLSAEAGVLPRVHGSGLFQRGQTQVLSIVTLGSPADSQ LIDGLNIEDVEKRYMHQYNFPPFCVGDVRPLRGPGRREIGHGHLAERALVPVLPDEKDFP YTMRVVSEVLSSNGSSSQASICGSTLSLMDAGVPIKKPVAGIAMGLIKEDDSISILTDIQ GLEDHLGDMDFKVAGTRDGITALQMDMKISGITEEVLRQSLADAKDARFRILDVIEAAID APRAELSEYAPRLYTIDIDPEKVRDVIGSGGKNINKIIDATGVKIETEDDGHITVASNDG ASGKKAIEMIKAIVTDPKPGDIYEGTVVRLMNFGAFVEIAIGKEGLLHISQIANHRVAKV EDELKVGDKVTVKVTEIDRQGRINLSRKALLEKPEKAERPEKAEAWPVDESPYRKDKE >gi|229269865|gb|GG666046.1| GENE 347 391143 - 392510 1396 455 aa, chain + ## HITS:1 COG:BH3947 KEGG:ns NR:ns ## COG: BH3947 COG3314 # Protein_GI_number: 15616509 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 14 455 23 460 460 369 48.0 1e-102 MTIKKEKITFARVLKFVIPSAIGVLLLMTPFKTANGGSTVAVSVISKFLNQTINSIVPIH YVALACITISTILGLAYKFAKPSFIEKSPILKEISDITPIWLFARVAGCIIGYMTAFKLG PELIWSENTGGLILFELIGGLLTIFLVAGFILPFLTEFGILEFVGIFLSKIMRPVFKLPG RSAVDCVASWIGDGTIGVALTAKQYEEGNYTEKEAAIISTTFSAVSITFCMVVLENVNMV DRFGLFYLIVGVSGIVAALIVPRIPPLSGKRDVRAKEQENPNEETVPENFTRLEWATQLA VLKAEKNLNLKQFLLNGRDTVLSLWLGVTPVIMAAGTLALVLSESTPIFTWLGMPFLPIL KLLQVPEAVEASKTMVVGFADMVVPSILASKGITSQFTQFVVAAVSVTQLIYMSETGAVI LGSNIPVDLKDIFILFLERTLITLPVIVILAHLLF >gi|229269865|gb|GG666046.1| GENE 348 392676 - 393122 500 148 aa, chain + ## HITS:1 COG:no KEGG:Apre_1828 NR:ns ## KEGG: Apre_1828 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 148 1 156 156 169 60.0 3e-41 MRRRFVFMTIVIAFLIVFTSCRSKKKEDKIEIFDSNNVKIAETEKQEELDYFSNFIGMSV ENVNDKKFDNYFKEIPEDAIKSYYVIFTSKGKDNEATKIDFYMYENYPYITMEGVPMITT PFTWQLSEEDIKEFNDKVQDLKDIDDKR >gi|229269865|gb|GG666046.1| GENE 349 393329 - 393601 308 90 aa, chain + ## HITS:1 COG:SP0275 KEGG:ns NR:ns ## COG: SP0275 COG3077 # Protein_GI_number: 15900209 # Func_class: L Replication, recombination and repair # Function: DNA-damage-inducible protein J # Organism: Streptococcus pneumoniae TIGR4 # 1 85 1 86 87 60 37.0 6e-10 MATTNLNIRTDKEIKEAAEKIYSSLGLNMTTAINMFLRASIRESGIPFDLKLDIPSDETI KAIEEGRMIAKDKNVTAYYSMDDLRKALEV >gi|229269865|gb|GG666046.1| GENE 350 393591 - 393869 93 92 aa, chain + ## HITS:1 COG:VCA0323 KEGG:ns NR:ns ## COG: VCA0323 COG3041 # Protein_GI_number: 15601088 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 3 91 11 98 98 74 45.0 4e-14 MKYKIKFTSRFKKDLKQVKKQGKDIEKLLDIVEKLANDESLDEKYRDHSLAGNYKGTREC HIESDFLLIYEKFNETLVLTLIRTGSHSDLFK >gi|229269865|gb|GG666046.1| GENE 351 393992 - 396277 2009 761 aa, chain + ## HITS:1 COG:CAC1812 KEGG:ns NR:ns ## COG: CAC1812 COG1674 # Protein_GI_number: 15895088 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 15 758 22 765 765 530 44.0 1e-150 MTNRNSGRIRKKTTSKSPNKSKQKKFRERSFDIKKFSMVVMAISVLIFIFILSSSTGLIG DALARFFEGLFGKFSLAFPILLFASFYLIYREKFRDNLSRMLLIYSIYFLTLAISSKDYI RNELAWSVEYSAFKGNLGGGWFGGLVGFYTLSFIGHLGLYILYATLIGSLIINVSPFTYK EFFLKLRDGFIILGIGIKHLSQKAYLKIREKIDESKTKKSLKEERIPSIRINNNLSDNPP RKAIKKRPSRKEEDRPREEIQKDLKNDDLIRDYKSKQVEFADLNEDLKREFADYSYPPVN LLKDVNAEGGIDNSEIRAKAGIIEETLESFGIDGKIVQIDVGPTVTCYELKPARGVKVSK IVNLADDLSLSLATSGIRIEAPIPGKSHVGIEVANDKKEIVGFKEIISSTQFIKSRHAIP FAMGKSISGEPIISAIEKMPHLLVSGATGSGKSVCINTIIMSILYKHSPDEVKLLLIDPK VVELSIYNGIPHLIMPVITDPKKASSSLFWAISEMERRYKLFEENQVRDIKGYKRAAETD DSMENLPYIVVIVDELSDLMMTAASEVEDYITRLAQKSRACGIHLIIATQRPTVDVITGT IKANIPSRISFAVTSQIDSRTILDMQGAEKLLGKGDMLYASSDSMKPLRIQGAFISDEEV LRVVDYIKGSSETNYNEEAIEKIEENVTADLEDEDELLDEAIKVIVADQTASVSMLQRKL KIGYARAGRIIDQLEQKGIVGGYEGSKPRKVLVDRTQIENL >gi|229269865|gb|GG666046.1| GENE 352 396287 - 396817 667 176 aa, chain + ## HITS:1 COG:L29672 KEGG:ns NR:ns ## COG: L29672 COG0558 # Protein_GI_number: 15673952 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Lactococcus lactis # 3 171 5 186 190 138 47.0 6e-33 MNIANKVTMVRLVMIPIFVVAFYYFGTSYNIAAILFMLASLTDALDGYLARSRNLITNFG KFVDPLVDKVLTMAAFIVLVEAGVIPAWSVIIIISRELIITGFRTLAADMGITIAASMWG KAKTTSQMISLVLLLLHNEVLNKFGIYVFYLAVILTIISGLDYLIKNKKVLDLENI >gi|229269865|gb|GG666046.1| GENE 353 396839 - 397252 241 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486462|ref|ZP_03916778.1| ## NR: gi|227486462|ref|ZP_03916778.1| hypothetical protein HMPREF0072_1865 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1865 [Anaerococcus lactolyticus ATCC 51172] # 1 137 1 137 137 220 100.0 3e-56 MDNEKGKKLIRVELILLVVQALASFFGNFIHQRFMSDGATITIKKFNFISPMTWGYGNFF PILFLASLLVAGIIMANAMRKNSHLEDKLSSNIVIFGGILFLMVPLIINVQQINIGLILM VTIQFIIFSINMVRTRN >gi|229269865|gb|GG666046.1| GENE 354 397311 - 398360 1483 349 aa, chain + ## HITS:1 COG:BH2383 KEGG:ns NR:ns ## COG: BH2383 COG0468 # Protein_GI_number: 15614946 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Bacillus halodurans # 3 339 2 343 349 428 65.0 1e-120 MDADKKKALDQAFKQIEKKYGKGSIMKMGEAPRVAIDSIPTGAVNLDIALGIGGLPRGRV IEIYGPESSGKTTLALHVIAEAQKLGDTCAFVDAEHALDAEYAGNLGVNIDELILSQPDT GEAGLDIAESLVRSGAVGLIVIDSVAALVPKAEIEGEMGDSHMGLQARLMSQALRRLTGI ISKSNTTVIFINQLREKIGVMFGNPETTTGGRALKFYASVRLDIRRIKTITEGDNSIGSR TRVKIVKNKVAPPFKIVEFDIMYGKGISKSGVLLDTAVDLGIVEKAGSWYSYGDEKLGQG RENVKIMLEENADLAKLIDDKVREAFKKDLAPVEEETEEAKQESILDQE >gi|229269865|gb|GG666046.1| GENE 355 398402 - 399436 935 344 aa, chain - ## HITS:1 COG:SMa2355 KEGG:ns NR:ns ## COG: SMa2355 COG0389 # Protein_GI_number: 16263727 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Sinorhizobium meliloti # 1 337 26 368 379 239 39.0 6e-63 MKYILHIDCDAFYASCEEIRNPKLKKRPMAVGGLSNKSIITTANYEARKFGIHSAMPVFI AKDLCPNLILVRVDHAYYKEKSIEVFDLVKAYAKVYEQVSIDEAYIEVDLNDPLDFAKNL QNKILAKTQIPISIGISYNKFLAKLASDWNKPYGIKYIGKEDVSKILPDLPVGKVHGIGR RATYKLNRIGIYKVADLLKLDKEFLESLFGKGGDYIYGVIRGIDERPVNPTRDRKSIGKE RTFSQNTNNIQVLKDYLRKISDLIEIEMVKKDIQAKTISIKLKDENFKNQTRSLTLQEPI YLADDIYLEAIKLLDEAFNGEYIRLIGISLSNLSTMDMNQLSFL >gi|229269865|gb|GG666046.1| GENE 356 399507 - 399752 331 81 aa, chain + ## HITS:1 COG:CAC3210 KEGG:ns NR:ns ## COG: CAC3210 COG1188 # Protein_GI_number: 15896457 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) # Organism: Clostridium acetobutylicum # 1 81 1 81 84 73 56.0 1e-13 MRVDKFLKNSRIIKRRQVAKEACENERVKINDKIAKAGSEVCKGDIIEITFGKSVLKVRV LDLIEGAKKNTADEMYEVIDG >gi|229269865|gb|GG666046.1| GENE 357 399745 - 400278 513 177 aa, chain + ## HITS:1 COG:no KEGG:Apre_0621 NR:ns ## KEGG: Apre_0621 # Name: not_defined # Def: septum formation initiator # Organism: A.prevotii # Pathway: not_defined # 8 102 2 96 105 66 51.0 4e-10 MARNRRRARKDSYLSKRREKNKRFLRMVLALLVAVSLGFLYLNHSMNKENAKMTKDITSS EKKLEDVKAEINSLKEDYEMRNTDKFKEKVAEEKLGMVKKSKDNDEEKEESSVIKPPKKS DGENQANPANNQNANPSGEENPSQNENNKASQTSLPNPNDRETQNQQVETKTNENGR >gi|229269865|gb|GG666046.1| GENE 358 400262 - 401626 1150 454 aa, chain + ## HITS:1 COG:CAC3204 KEGG:ns NR:ns ## COG: CAC3204 COG0037 # Protein_GI_number: 15896451 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Clostridium acetobutylicum # 3 453 1 460 461 280 38.0 3e-75 MKMEDRVYKTVVENNLLSEGDTVIVGASGGPDSQFLIHILDKLKNKLGIDIVLAHLNHLH RKEASKDEDLVRQTAEKLGLKFYSRSRSMDELAKELKISSEDAGRRLRYEFFNDLSKKFP ISKIAVAHNKDDQAETALMRIIRGTGLDGLRAMDYKNGNIIRPILNIKKKEILAYLDSNE IAYAIDHTNFENDYTRNKIRLDIIPILEEINPNVVDAVFKLSDLARDDLAILEKSVDSKF DEMSKVKHGKIYFDKDHFEKTDPALLRRILRKAVGVLKGEIKDLSKENLDDFLKIKNLAT GKSLIKDDISLRKSYEAYVLEILTPAEKSKTDLYLYDKDQVHFDGIYLKTSIINSGKYEK NKNVGYFDYDLLHFPLKVRTRRAGDRFVPLGHKSEKKLKDFFIDQKIDRKKRDELPIILS DDKIIWLASLRISDEFKVTGGTKKILKIEVYDEN >gi|229269865|gb|GG666046.1| GENE 359 401616 - 402185 716 189 aa, chain + ## HITS:1 COG:VC0585 KEGG:ns NR:ns ## COG: VC0585 COG0634 # Protein_GI_number: 15640606 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Vibrio cholerae # 11 177 6 172 177 169 50.0 3e-42 MKIDKDDLIEKVLIDEESLNLKIKQLAKTLNEHYADRDELILICILKGSVMFMTELAKNL NIETKMEFMSVSSYENNTYSSGNVKILMDLDIDIKDKEVLIVEDIIDTGYTLKKIKETLL KREPKDLKIITLLDKPERREVDIKPDYTGFKIPNDYVVGFGLDYNQLYRNLAYIGVVKRS VYEDIEEIK >gi|229269865|gb|GG666046.1| GENE 360 402229 - 402720 434 163 aa, chain + ## HITS:1 COG:no KEGG:Apre_0624 NR:ns ## KEGG: Apre_0624 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 163 1 163 163 183 58.0 2e-45 MQGFDKIILILYGAITVFFIYRIFKQNKDKNLLGANVTSFKRPITSMEMILFSILVVVGG VNLVNGYKTNDKNSMMTACVMVVLAIVFMIFTLCKLYISEKGMLINSGFVNFKDLKKWGF DTNRGELVMAIKKDKNTTRESVKVKKEDIEEINELIRKYKLGK >gi|229269865|gb|GG666046.1| GENE 361 402783 - 403574 938 263 aa, chain + ## HITS:1 COG:CAC3200 KEGG:ns NR:ns ## COG: CAC3200 COG1521 # Protein_GI_number: 15896447 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Clostridium acetobutylicum # 1 260 12 268 273 197 42.0 2e-50 MLLVIDIGNTNTVIGIYEKENLKSRFRVATDLTSTSDQLVATLFNMFMIHDIKVEDIDDT IISCVVPDVLYNWQSANRKLLDKEAKVVEYDTYTGITIDYENPSEVGADRIVDAVAAYEK YGGPSVVVDMGTAITVDVVTSDARYLGGVIAPGIKIAQDGLFGKTAKLPKIELKQPTTAI TESTSEAINAGIVIGYIGMIDKLIETIEDEIVQRLGIDRDEINVIATGGFSELISQSSKY IETIEPDLMLEGLRIIYERNLGR >gi|229269865|gb|GG666046.1| GENE 362 403552 - 404550 462 332 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148828154|ref|YP_001292907.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae PittGG] # 9 321 11 322 326 182 34 2e-44 MRETLVDKKIMLAPLAGVTDTAFRIVCEKNGCDKTFTEMVSVNALSFDNKATADIMFISD MEKNANIQIFGSDVDKIKRVVEEKINPLTNIKEISFNMGCPAPKIFNNGEGSALLKNPHQ VYKITKALREATDKVINIKFRLGVDDDAINYLENGKAMEEAGADYLILHARTRKAMYSGH ADWQAIKNLKEAVNIPVIANGDIFTPEDFIRAMEITGADGAMIARGAMGNPFIFRYIKEY LEKGSYTKVTFDEIISQIKEHYELALKFKDERLVINQMRKHVGWYIKGLYMSSDYRDRVN KIHTSKEIFDLLDEYRKILGDYNDREERSNIN >gi|229269865|gb|GG666046.1| GENE 363 404519 - 404992 708 157 aa, chain + ## HITS:1 COG:CAC3198 KEGG:ns NR:ns ## COG: CAC3198 COG0782 # Protein_GI_number: 15896445 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Clostridium acetobutylicum # 1 157 1 158 158 130 52.0 1e-30 MTEKKEVILTKEKLEKLEDELEYLKTKKRPEMAEKIKIARSFGDLSENADYDEAKNEQGE VESRIMKIEDMIRNAKTIEVDENSDTVGVGNTVCLYDEEFEEDVEYKIVGTAESNPLEGY ISNESPVGEAIIGHKINDRVEVETPNGKMYFVIKNIK >gi|229269865|gb|GG666046.1| GENE 364 405002 - 406915 2459 637 aa, chain + ## HITS:1 COG:CAC3197 KEGG:ns NR:ns ## COG: CAC3197 COG1190 # Protein_GI_number: 15896444 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Clostridium acetobutylicum # 8 486 26 510 515 545 57.0 1e-155 MADNIQDLNEMLKIRREKLHELKEEGKDPHRIVNFKNRISSKEIKDNFEKYEDQTVRVAG RILAKRGHGNMSFMDVQDDLGQIQVVNRKNVIGDDFKYIKKYDIGDIIGVEGKVFKTNQG EISIEVAKSDLLTKALQMLPEKWHGLKDPDLRYRQRYIDLIVNPEVKEVFVQRSRIISAI REFLDGRGFLEVETPILNTIAGGATARPFITHHNTLDIDMYLRIANELYLKRLIVGGFDR VYEIGRMFRNEGMDATHNPEYTAMELYQAYGDYEDMMEITENMVEHVAKKVKGTTLVEFD GHEIELKAPWKRIPMIEAVKEYSGVDFNEIKTDEEAKAIAKEKGVEVKETRGEIIAEFFD EFVEDKLIQPTFITDYPVEISPLAKRKNDDRSLTYRFEAFVSGAEIGNAFSELNDAEDQR ARFEDQVRKREAGDDEAQMMDYDFVNALEVGLPPTGGLGIGIDRLIMILTGQHSIRDVLL FPTMKPIGLEKAENGGLSKETYETYDKLTTEEIDLSKVKVEPLFEDMVDFETFSKSDFRV VKVKNCEEVPKSKKLLKFTLDDGSEKERVILSGIKEYYSAESLIGKTLLAICNLPPRKMM GIDSEGMIISAICEYDGEEKLNLIMLDDNIPAGSKLY >gi|229269865|gb|GG666046.1| GENE 365 406979 - 407260 138 93 aa, chain + ## HITS:1 COG:no KEGG:FMG_0930 NR:ns ## KEGG: FMG_0930 # Name: not_defined # Def: putative lipoprotein # Organism: F.magna # Pathway: not_defined # 15 65 1 51 179 77 78.0 1e-13 MRWIIRIILLPIRLVLSLLIAFLTFILSLSTALLSVVSTLIFIIGIASIFQGDKQIVIEA LILAFLFSPFGLPKLGIYVIGLLELLIYTIKSI >gi|229269865|gb|GG666046.1| GENE 366 407344 - 407589 296 81 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0865 NR:ns ## KEGG: SPAP_0865 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 78 1 78 257 147 98.0 2e-34 MNFDYFYNRQSEMYNFIRLPMVLMEDEIFESISIEAKVLYSYMLNRMGLSYKNGWIDEDG KVFIYYTIESIKDQFNCALAS >gi|229269865|gb|GG666046.1| GENE 367 409641 - 410150 377 169 aa, chain + ## HITS:1 COG:SPy0980_2 KEGG:ns NR:ns ## COG: SPy0980_2 COG3645 # Protein_GI_number: 15674990 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pyogenes M1 GAS # 67 161 30 124 125 108 57.0 6e-24 MYSLILSSKLPQAKIFKAWVTREVLPSIRKNGGYIAGQEKKTNEELLADAILVANRIIAK REEEIEVLRPKADYYDKLVDYNLLTNFRNTAKELGIPQNQFISFLMDKGLIYRDKKKKLL PYADKNKGYFEVKEWVDPLGTLVGIQTFITPKGRHYLLILLDSEGFYDE >gi|229269865|gb|GG666046.1| GENE 368 410143 - 411195 965 350 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 153 331 157 326 591 106 34.0 8e-23 MNKVLEAILSDIKNLIKIDNPKKFILANIPYLSFFYIGNIFSKHINSYVGGDIIDRLMVG ISDIGTLSYIPSINPRDLLVGISVAGLVKLIVYSKGKNKKKYRQGKEYGSARWGESKDIA PYIDPKFENNVLITNTERLTMNSRPKNPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHS SYVVTDPKGTLVLECGKMLYENGYDIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTII ANTKGDGEKAGEDFWVKAEKLYYTALIGYIYYEAPEEEKNFKTLLDMIDASEVREDDETY MNPIDRLFEALEKKDPSHFAVKQYKKYKLAAGVIELRRTLNHCFSETCTS >gi|229269865|gb|GG666046.1| GENE 369 411235 - 413049 1478 604 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 299 6 301 301 311 55.0 2e-84 MRNFEKTTALYERLSRDDELEGESNSIVNQKKILEEYASKNNLTNIIHFTDDGISGTQFD RPGFMEMMNGVNTGNIGCIIVKDMSRLGRDYLKVGQCMEILRQKGVRLIAINDNVDSFYR EDDFTPFRNIMNEWYARDTSRKIQSTFRSKGESGKHTASTPPYGYIKDEKDKDKWIVDEK AAEIVRRIFNLTMDGAGPYKIAKILEADKIDIPAYHQQKMGYGLHQSKNFEYPYRWCSST IASILKKKEYLGHTVNFKTRKHFKDKKSKYVSEDKWLIFENTHEAIIDQETFDNVQRIRG NVKRYPDGWGEYHPLTGLMYCADCGSKMYVHRRNNYKNIPYYVCSNYKKVPCGTLCPSAH RIKAEVVLNLIQETLKDIKNYLDEDNEAFTRSIQNEMEEKEKAEIEKQRVSLINNKSRIQ ELERLMCRIYEDMILEKIPSSRYEILNSQYETEQRALSREIEDLELVISRYENETDRVRK FISLISRYENFDDLTNTMINEFVEKIIIHERDRKGSQTSKQKIEIYFNFIGNYEVPKEEL SEEERLKLEEEERKINERRDRLHQNYLKRKANGKQQEYEERYKARREQKKLKNLKNRNTN KIVN >gi|229269865|gb|GG666046.1| GENE 370 413296 - 413823 259 175 aa, chain + ## HITS:1 COG:BH0263 KEGG:ns NR:ns ## COG: BH0263 COG1595 # Protein_GI_number: 15612826 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus halodurans # 2 169 3 182 187 70 27.0 1e-12 MSTDFFLVCRIRNGDDKAAEIIIRKYYMKVFDYCKYHSENIHAAEDLTQEVFLIFLKKID QYKHRGKLLNYLYTIARNKCIDERKKESNKDISIECIDYEVSSSFNESERTIESLYVREA VEKLPSDIREIIIMYYFLDMKQREIADICNISLELVKYRLKKGKEMIKKYIGGEI >gi|229269865|gb|GG666046.1| GENE 371 413820 - 414608 498 262 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3106 NR:ns ## KEGG: EUBREC_3106 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 30 255 24 248 254 94 26.0 5e-18 MKQMNFSEDRLEKILKNMNKQNEQKPSKEAIDSLVLKARELINSIDNESRIGFIEFIILQ VKIMKKECWLAQAFLLFIAAKWLSISNGEAYVQRGLSIIASLFVILVIPELWRNIENKSI EIEETSIFNLRKIYAAKLIAFGFIDTTILTLFCIYAVQMQEIMFADILKQFIFPIMIASM ICMKAFSGRKYFNQLITMIICIAANMVWMMIVLNEYIYLKITPFVWVVMFSTSILLTIYY IKKALHNNIRHLEVKINEFGFE >gi|229269865|gb|GG666046.1| GENE 372 414589 - 415476 671 295 aa, chain + ## HITS:1 COG:CC3566 KEGG:ns NR:ns ## COG: CC3566 COG1131 # Protein_GI_number: 16127796 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Caulobacter vibrioides # 3 283 2 282 294 204 38.0 2e-52 MNLVLNKVKKSFGNMKAVDNVSIEMEEGLYGLLGSNGAGKTTLMRMLCTVLKPTEGSICY DGMDIFKMDAQYRDIIGYLPQEFGFYPNLSVKKYLSYIASLKGLKNKVAERRIDILLETT GMKEHSFKKMKELSGGMKRRVGIAQALLNDPKILILDEPTAGLDPIERIKCRNLLGELAK GKIVLLSTHIVSDIEAIAKKVFVMKEGKIIKEGTVEELCSNIPCKVWLYYLNTDEAEGFI SRFKSSISAINNNGKYTEVRILSENKPNDNARCVDATLEDLFYYYFGIEGGDKYD >gi|229269865|gb|GG666046.1| GENE 373 415469 - 416662 606 397 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_3104 NR:ns ## KEGG: EUBREC_3104 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 393 2 395 401 295 38.0 4e-78 MIKHEINIVFSNRINRLVLLFLLVVAVVLSIFAVWSVSYVDKDGITHNGLFAARQLTEAK AEYAGKLNSDIFEDIVNTDKRIKSEYGNKIPENIYADNMQKYMDIKDFMVSTISYGGDID YTRFDALDSDMARNMYAIRDDNIVHLINEYGTTEEKTEFLKKQYSKLVTPFDYAPADSWI TMGLYATTYAIILIISISFITSGIFSEDFKLKAESVFFSTKLGRSRGTKTKILTGLFMAT IIYWGAMLILSIISFAFMGVSGANSPIQIEYSYCMYNYTFLERYFVIMLAGYVGSLLSSV LTMLVSAKTHSPLISLCVPMILFVVSPFIGRVLPFDGFFNITPDQLINVYNCIKIPLLYQ VLGKVVMQIPMIIVMYSIIVIITIPFIYLSFSKCCQN >gi|229269865|gb|GG666046.1| GENE 374 416816 - 416995 104 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695592|ref|ZP_03303720.1| ## NR: gi|212695592|ref|ZP_03303720.1| hypothetical protein ANHYDRO_00109 [Anaerococcus hydrogenalis DSM 7454] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] hypothetical protein ANHYDRO_00109 [Anaerococcus hydrogenalis DSM 7454] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 59 1 59 59 100 100.0 4e-20 MKIINDSTGTPVLRRAGCVCDSGWKSTRGPWQPFWNCNCSCIKGNTENNNANFKKAKDA >gi|229269865|gb|GG666046.1| GENE 375 417086 - 417523 400 145 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212695585|ref|ZP_03303713.1| ## NR: gi|212695585|ref|ZP_03303713.1| hypothetical protein ANHYDRO_00102 [Anaerococcus hydrogenalis DSM 7454] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] hypothetical protein ANHYDRO_00102 [Anaerococcus hydrogenalis DSM 7454] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 145 1 145 145 204 100.0 1e-51 MVINKKNVLLISIISFIAVIIIFLYFNNDKSYEKIREILPENYYEIDFSDGDAYKNVKFT KEIKKELSDLLIANDIKELDKDDWLKIEPMKFIEIVSDGKTKLLIYAESDNTYIECYENG KVFRTYITENDLTEKIKNIINISVN >gi|229269865|gb|GG666046.1| GENE 376 417703 - 418008 340 101 aa, chain + ## HITS:1 COG:no KEGG:Apre_1787 NR:ns ## KEGG: Apre_1787 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 96 1 96 96 93 92.0 3e-18 MKKLEQIREESKEIKDKIDYTEERLRQLKNQEKKILKQDMVKRRKERTHRLITRGAILES LIENSEELTDEEIKILLEEATKTKEFKETLKIIRQNGKILT >gi|229269865|gb|GG666046.1| GENE 377 418115 - 418348 141 77 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0168 NR:ns ## KEGG: Vpar_0168 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 60 1 60 64 73 61.0 4e-12 MDNRIEKYRKPLGLSQHRLGKKVGISRTSINKIETGKTIPSLKTANDIANALGVCIYQIF DLDGTGRYRCSKCQTKQ >gi|229269865|gb|GG666046.1| GENE 378 418513 - 418761 222 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486487|ref|ZP_03916803.1| ## NR: gi|227486487|ref|ZP_03916803.1| hypothetical protein HMPREF0072_1890 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1890 [Anaerococcus lactolyticus ATCC 51172] # 1 82 1 82 82 140 100.0 3e-32 MDTWTGKVHDGFTVRLKNLFSSGVISYSVNIEEDGKMIYDERFASESILRVKANRRSSYI VTIVNQTNKTLSGKVKINSYVR >gi|229269865|gb|GG666046.1| GENE 379 418933 - 419421 530 162 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486488|ref|ZP_03916804.1| ## NR: gi|227486488|ref|ZP_03916804.1| hypothetical protein HMPREF0072_1891 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1891 [Anaerococcus lactolyticus ATCC 51172] # 1 162 1 162 162 252 100.0 6e-66 MKKRFTLLIAIVMLLTAMAINVFASSANNNSEVISKELQEWFNGLSKEEQLSVNYDLLQS IRLSDKDIEWLKWYNTLSKEEQLAVNSYPSQLLNVLSSNGVSKVNFGDLKVNEDMINEDK NKKANKPAKKAGKNAQTGIAGMAGVAGILAAASIAYIPSKRD >gi|229269865|gb|GG666046.1| GENE 380 420312 - 421421 701 369 aa, chain + ## HITS:1 COG:no KEGG:LLKF_0684 NR:ns ## KEGG: LLKF_0684 # Name: not_defined # Def: ChW repeat-/cell adhesion domain-containing transglutaminase-like protease # Organism: L.lactis_KF147 # Pathway: not_defined # 164 369 592 812 999 67 26.0 1e-09 MKRLLTLVIALVMMLPVLSSRSIAADAGEQRDVKELYLISDKVNDDHIAYANSEKENVLM ALKDVVSLDGFVLEDMISFGKPFNLNESTYIPIIIGNKIVALMAVSDFEGELGWTLSKDF SDGLNQISKLTSLESPASLYTVNGNVFATISGKEVQLTFYPELEVSRDSKLYNDAEIPSK NVVNIMEIENLEGSYRLYNMVFASRSSSSKYIDLDLAETQEDQSWCSAFAGAQILRQRGK GKIYANNIMRYFYPNVSYDDLKKKSISHNQLIKYANNKKSYPSKSTGTLSLDSVKKQIDS NKSIYLSCDGTGTYKKANHALVLRGYNTRNNTYSVWNPWDDSYVSMSISSKSISVNGGKF IWSSTIYGW >gi|229269865|gb|GG666046.1| GENE 381 421378 - 421773 275 131 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486492|ref|ZP_03916808.1| ## NR: gi|227486492|ref|ZP_03916808.1| hypothetical protein HMPREF0072_1895 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1895 [Anaerococcus lactolyticus ATCC 51172] # 12 131 1 120 120 215 100.0 9e-55 MVASLYGVRQFMDGRYKKIFIPILLLITVIGVIYIAKNTSKDDIDANYKPMVKVENKIYY WSKDLEDISLKDFTLIGEVKKSYNSGLKSIDERSENYSSNVFPTGSKLYLYDKTSIIVVT NSGFSLCVEGE >gi|229269865|gb|GG666046.1| GENE 382 422722 - 422916 144 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486493|ref|ZP_03916809.1| ## NR: gi|227486493|ref|ZP_03916809.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 64 1 64 64 76 100.0 8e-13 MKKRKERTHRLITRGAILESLIENAEELTDEEIKILLEEATKTKEFKETLRIMKKCKNVG IDIM >gi|229269865|gb|GG666046.1| GENE 383 423012 - 423242 94 76 aa, chain + ## HITS:1 COG:no KEGG:Vpar_0168 NR:ns ## KEGG: Vpar_0168 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: V.parvula # Pathway: not_defined # 1 60 1 60 64 72 60.0 4e-12 MNNRIEKYRKPLGLSQHRLGKKVGISRTSINKIETGKTIPSLKTANDIANALGVCMYQIF DLDGEETYKCHSHNCC >gi|229269865|gb|GG666046.1| GENE 384 423589 - 424134 51 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486495|ref|ZP_03916811.1| ## NR: gi|227486495|ref|ZP_03916811.1| hypothetical protein HMPREF0072_1898 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1898 [Anaerococcus lactolyticus ATCC 51172] # 1 181 29 209 209 346 99.0 5e-94 MNVEELQSLELNIQEGFEKLKNDTPEVKSYYDSLGNGINESIQEVKISDNLLLGVRTRTE EIGNEIRRFSGNDILYNSSSTYKVKSTSYIKHITGLYNLVTCNAVGRFKSNGTPLYGSPT YSSKFWEVNTSSSVKDPYVVCNFDCRAFIGIDPVGMEVFSRSKTCSLWFSSSNKKGYASW D >gi|229269865|gb|GG666046.1| GENE 385 424311 - 424499 144 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486497|ref|ZP_03916813.1| ## NR: gi|227486497|ref|ZP_03916813.1| hypothetical protein HMPREF0072_1900 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1900 [Anaerococcus lactolyticus ATCC 51172] # 1 62 1 62 62 63 100.0 5e-09 MAVPAAVAASPAVKPPSKYVKTDHKTVPLPEAKTANSAAFNVSTASIYLSIASLSLDKYL IA >gi|229269865|gb|GG666046.1| GENE 386 425028 - 425342 338 104 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11443 NR:ns ## KEGG: HMPREF0837_11443 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 104 2 105 105 90 94.0 2e-17 MTSKRLSIEEQIEKKEESIKQLQNQKRQLKKKLNEQERKARNKRLIEKGTVFESIFEESK DLTKYEFYKLIKMLNDEEIRLNIMEILEERINDNVEKSSKDEIT Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:38:42 2011 Seq name: gi|229269864|gb|GG666047.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD4, whole genome shotgun sequence Length of sequence - 251827 bp Number of predicted genes - 246, with homology - 244 Number of transcription units - 92, operones - 53 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 21 - 80 6.8 1 1 Tu 1 . + CDS 195 - 614 468 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 620 - 671 3.3 + Prom 635 - 694 7.0 2 2 Op 1 8/0.000 + CDS 723 - 1565 936 ## COG1161 Predicted GTPases 3 2 Op 2 1/0.000 + CDS 1562 - 2185 555 ## COG0164 Ribonuclease HII 4 2 Op 3 . + CDS 2182 - 2529 379 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 5 2 Op 4 13/0.000 + CDS 2519 - 3610 956 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 6 2 Op 5 . + CDS 3615 - 5672 2326 ## COG0550 Topoisomerase IA + Term 5678 - 5714 5.2 - Term 5664 - 5702 7.2 7 3 Tu 1 . - CDS 5712 - 6125 484 ## COG1970 Large-conductance mechanosensitive channel - Prom 6163 - 6222 9.4 + Prom 6145 - 6204 3.2 8 4 Op 1 . + CDS 6230 - 6820 428 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 9 4 Op 2 . + CDS 6810 - 7640 904 ## Apre_1286 hypothetical protein 10 4 Op 3 . + CDS 7649 - 8857 1326 ## COG1686 D-alanyl-D-alanine carboxypeptidase + TRNA 8880 - 8956 83.6 # Arg CCT 0 0 + Prom 8881 - 8940 79.3 11 5 Op 1 . + CDS 8969 - 9445 405 ## COG0590 Cytosine/adenosine deaminases + Term 9449 - 9482 -0.5 + Prom 9475 - 9534 6.5 12 5 Op 2 . + CDS 9582 - 10529 1136 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 13 5 Op 3 . + CDS 10526 - 11155 632 ## COG0572 Uridine kinase 14 5 Op 4 . + CDS 11145 - 12950 1637 ## COG0296 1,4-alpha-glucan branching enzyme 15 5 Op 5 . + CDS 12947 - 13414 504 ## Apre_1279 hypothetical protein 16 5 Op 6 . + CDS 13411 - 14544 1358 ## COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis 17 5 Op 7 . + CDS 14610 - 15263 576 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis 18 5 Op 8 . + CDS 15336 - 16808 1649 ## COG4868 Uncharacterized protein conserved in bacteria + Term 16816 - 16858 4.5 - Term 16804 - 16846 4.5 19 6 Tu 1 . - CDS 16852 - 18984 1889 ## COG1409 Predicted phosphohydrolases - Prom 19004 - 19063 7.7 + Prom 19042 - 19101 8.9 20 7 Op 1 . + CDS 19167 - 20375 1640 ## COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit + Term 20389 - 20417 2.3 21 7 Op 2 8/0.000 + CDS 20467 - 21699 1143 ## COG1333 ResB protein required for cytochrome c biosynthesis 22 7 Op 3 . + CDS 21699 - 22520 698 ## COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component 23 7 Op 4 . + CDS 22530 - 23081 361 ## Apre_0198 hypothetical protein + Prom 23085 - 23144 4.5 24 8 Op 1 . + CDS 23174 - 24076 536 ## Apre_0532 hypothetical protein 25 8 Op 2 . + CDS 24063 - 25796 614 ## PROTEIN SUPPORTED gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein 26 8 Op 3 9/0.000 + CDS 25793 - 26071 147 ## PROTEIN SUPPORTED gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 27 8 Op 4 16/0.000 + CDS 26049 - 26498 732 ## PROTEIN SUPPORTED gi|227486605|ref|ZP_03916921.1| ribosomal protein L9 28 8 Op 5 . + CDS 26498 - 27829 1527 ## COG0305 Replicative DNA helicase 29 8 Op 6 . + CDS 27822 - 28376 569 ## PROTEIN SUPPORTED gi|228003785|ref|ZP_04050771.1| acetyltransferase, ribosomal protein N-acetylase 30 8 Op 7 . + CDS 28366 - 29097 785 ## Apre_0537 primosome, DnaD subunit 31 8 Op 8 . + CDS 29099 - 30079 840 ## COG1484 DNA replication protein 32 8 Op 9 . + CDS 30066 - 30737 206 ## PROTEIN SUPPORTED gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 + Term 30738 - 30772 0.6 + Prom 30739 - 30798 6.8 33 9 Tu 1 . + CDS 30818 - 31699 872 ## Mahau_1176 hypothetical protein + TRNA 32752 - 32827 83.1 # Val GAC 0 0 - Term 32885 - 32946 9.5 34 10 Tu 1 . - CDS 32953 - 34869 1514 ## COG1835 Predicted acyltransferases - Prom 34915 - 34974 9.0 35 11 Op 1 . + CDS 35231 - 36520 1575 ## COG0172 Seryl-tRNA synthetase + Term 36530 - 36574 4.9 36 11 Op 2 . + CDS 36600 - 37364 624 ## Apre_1115 purine or other phosphorylase family 1 + Term 37393 - 37433 7.2 - Term 37383 - 37418 5.3 37 12 Tu 1 . - CDS 37428 - 37967 729 ## COG0431 Predicted flavoprotein - Prom 37987 - 38046 5.1 38 13 Op 1 5/0.000 - CDS 38101 - 39495 1812 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 39 13 Op 2 . - CDS 39482 - 40324 1031 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases - Prom 40421 - 40480 8.5 + Prom 40313 - 40372 8.2 40 14 Tu 1 . + CDS 40466 - 42241 258 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 42245 - 42279 4.5 + Prom 42244 - 42303 5.7 41 15 Op 1 . + CDS 42323 - 43114 808 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 42 15 Op 2 12/0.000 + CDS 43123 - 43905 928 ## COG2966 Uncharacterized conserved protein 43 15 Op 3 . + CDS 43907 - 44383 385 ## COG3610 Uncharacterized conserved protein + Term 44522 - 44557 -0.6 44 16 Op 1 . + CDS 44746 - 44973 290 ## COG0225 Peptide methionine sulfoxide reductase 45 16 Op 2 . + CDS 44970 - 46028 997 ## COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 46 16 Op 3 . + CDS 46045 - 46266 398 ## COG4443 Uncharacterized protein conserved in bacteria + Term 46270 - 46304 2.7 47 16 Op 4 . + CDS 46308 - 46721 425 ## COG2510 Predicted membrane protein 48 16 Op 5 . + CDS 46779 - 47474 540 ## Apre_1390 aldose 1-epimerase + Term 47482 - 47511 0.5 + Prom 47482 - 47541 3.4 49 17 Op 1 40/0.000 + CDS 47563 - 48222 727 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 50 17 Op 2 . + CDS 48207 - 49223 906 ## COG0642 Signal transduction histidine kinase 51 17 Op 3 . + CDS 49213 - 49458 265 ## gi|227486629|ref|ZP_03916945.1| hypothetical protein HMPREF0072_2032 52 17 Op 4 . + CDS 49442 - 49729 294 ## gi|227486630|ref|ZP_03916946.1| hypothetical protein HMPREF0072_2033 53 17 Op 5 7/0.000 + CDS 49805 - 50872 989 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes 54 17 Op 6 . + CDS 50869 - 51972 1233 ## COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain + Term 52018 - 52063 6.3 - Term 52004 - 52051 5.1 55 18 Tu 1 . - CDS 52059 - 52886 1175 ## COG0708 Exonuclease III - Prom 53112 - 53171 9.0 + Prom 52863 - 52922 9.5 56 19 Op 1 . + CDS 53095 - 54036 801 ## HMPREF0421_21021 hypothetical protein 57 19 Op 2 . + CDS 54056 - 54616 548 ## COG1704 Uncharacterized conserved protein + Term 54636 - 54695 12.9 + Prom 54680 - 54739 12.1 58 20 Op 1 . + CDS 54794 - 56224 1953 ## Apre_0571 hypothetical protein + Term 56233 - 56260 -0.8 59 20 Op 2 . + CDS 56303 - 57766 1918 ## gi|227486637|ref|ZP_03916953.1| hypothetical protein HMPREF0072_2040 60 20 Op 3 . + CDS 57775 - 59082 1184 ## Apre_0567 hypothetical protein 61 20 Op 4 . + CDS 59103 - 59996 843 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 60026 - 60084 5.2 + Prom 60021 - 60080 8.0 62 21 Op 1 6/0.000 + CDS 60280 - 63009 3884 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) 63 21 Op 2 . + CDS 63135 - 64124 1066 ## COG1186 Protein chain release factor B + Term 64125 - 64152 0.1 64 21 Op 3 . + CDS 64167 - 65252 1244 ## COG0180 Tryptophanyl-tRNA synthetase 65 21 Op 4 5/0.000 + CDS 65255 - 66553 1069 ## COG0733 Na+-dependent transporters of the SNF family + Term 66601 - 66643 2.3 + Prom 66611 - 66670 10.9 66 21 Op 5 . + CDS 66732 - 68036 1092 ## COG0733 Na+-dependent transporters of the SNF family + Term 68042 - 68070 1.0 - Term 68072 - 68109 5.1 67 22 Tu 1 . - CDS 68117 - 68797 993 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase - Prom 68849 - 68908 10.6 + Prom 68894 - 68953 9.0 68 23 Op 1 29/0.000 + CDS 68978 - 69457 610 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 69 23 Op 2 . + CDS 69454 - 70494 1121 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 70 23 Op 3 10/0.000 + CDS 70481 - 74149 4103 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 71 23 Op 4 13/0.000 + CDS 74170 - 75585 1581 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 72 23 Op 5 21/0.000 + CDS 75582 - 76586 761 ## PROTEIN SUPPORTED gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 73 23 Op 6 10/0.000 + CDS 76583 - 77146 672 ## COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN 74 23 Op 7 17/0.000 + CDS 77143 - 78660 1935 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 75 23 Op 8 . + CDS 78662 - 79900 1513 ## COG0151 Phosphoribosylamine-glycine ligase 76 23 Op 9 . + CDS 79907 - 81550 2103 ## COG2759 Formyltetrahydrofolate synthetase + Term 81705 - 81733 -0.9 + Prom 81793 - 81852 11.8 77 24 Op 1 . + CDS 81873 - 82457 774 ## gi|227486655|ref|ZP_03916971.1| hypothetical protein HMPREF0072_2058 78 24 Op 2 . + CDS 82480 - 83070 682 ## gi|227486656|ref|ZP_03916972.1| hypothetical protein HMPREF0072_2059 + Term 83102 - 83131 1.2 + Prom 83114 - 83173 8.3 79 25 Op 1 . + CDS 83332 - 83625 341 ## gi|227486657|ref|ZP_03916973.1| hypothetical protein HMPREF0072_2060 80 25 Op 2 . + CDS 83625 - 83894 270 ## gi|227486658|ref|ZP_03916974.1| conserved hypothetical protein + Term 83906 - 83953 7.9 - Term 83901 - 83936 1.0 81 26 Tu 1 . - CDS 83939 - 84646 643 ## Apre_1445 hypothetical protein - Prom 84678 - 84737 9.7 - Term 84705 - 84742 7.3 82 27 Op 1 1/0.000 - CDS 84750 - 87374 3797 ## COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase 83 27 Op 2 . - CDS 87388 - 88185 867 ## COG1806 Uncharacterized protein conserved in bacteria - Prom 88220 - 88279 8.4 + Prom 88366 - 88425 6.1 84 28 Op 1 . + CDS 88643 - 91279 3022 ## COG0525 Valyl-tRNA synthetase 85 28 Op 2 3/0.000 + CDS 91279 - 92013 984 ## COG0500 SAM-dependent methyltransferases 86 28 Op 3 . + CDS 92010 - 92210 268 ## COG1278 Cold shock proteins + Term 92211 - 92248 5.7 - Term 92203 - 92232 1.4 87 29 Tu 1 . - CDS 92236 - 92532 487 ## COG0607 Rhodanese-related sulfurtransferase - Prom 92599 - 92658 6.8 + Prom 92533 - 92592 10.7 88 30 Op 1 . + CDS 92622 - 93266 797 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 89 30 Op 2 . + CDS 93266 - 94273 864 ## COG2267 Lysophospholipase + Prom 94280 - 94339 9.1 90 31 Op 1 . + CDS 94362 - 95381 1138 ## CE0621 hypothetical protein + Term 95387 - 95424 7.1 + Prom 95394 - 95453 2.8 91 31 Op 2 . + CDS 95475 - 96326 823 ## COG3001 Fructosamine-3-kinase + Prom 96341 - 96400 6.8 92 32 Op 1 . + CDS 96421 - 98091 1275 ## Apre_1222 hypothetical protein 93 32 Op 2 . + CDS 98084 - 99406 1446 ## Apre_1221 hypothetical protein 94 32 Op 3 . + CDS 99436 - 101493 1475 ## COG1201 Lhr-like helicases 95 32 Op 4 . + CDS 101549 - 102274 776 ## gi|227486673|ref|ZP_03916989.1| hypothetical protein HMPREF0072_2076 96 32 Op 5 . + CDS 102271 - 103017 262 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 97 32 Op 6 . + CDS 103014 - 104912 1127 ## Clos_0981 hypothetical protein 98 32 Op 7 40/0.000 + CDS 104890 - 105558 596 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Prom 105635 - 105694 6.9 99 32 Op 8 . + CDS 105779 - 106519 729 ## COG0642 Signal transduction histidine kinase 100 32 Op 9 . + CDS 106529 - 106942 455 ## gi|227486678|ref|ZP_03916994.1| hypothetical protein HMPREF0072_2081 101 32 Op 10 . + CDS 106952 - 107884 779 ## Apre_1219 hypothetical protein + Prom 107889 - 107948 3.5 102 32 Op 11 . + CDS 107972 - 109084 1795 ## Apre_1218 hypothetical protein + Term 109087 - 109124 6.2 - Term 109071 - 109116 7.5 103 33 Op 1 . - CDS 109122 - 110516 1386 ## Apre_1217 peptidase S41 104 33 Op 2 40/0.000 - CDS 110485 - 111852 1419 ## COG0642 Signal transduction histidine kinase 105 33 Op 3 . - CDS 111833 - 112546 900 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 112647 - 112706 6.5 + Prom 112448 - 112507 5.8 106 34 Tu 1 . + CDS 112680 - 112931 268 ## gi|227486684|ref|ZP_03917000.1| membrane protein 107 35 Tu 1 . - CDS 113857 - 116709 3536 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 116850 - 116909 8.3 + Prom 116757 - 116816 11.3 108 36 Op 1 . + CDS 116895 - 118130 516 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 109 36 Op 2 1/0.000 + CDS 118099 - 118752 809 ## COG1739 Uncharacterized conserved protein 110 36 Op 3 . + CDS 118755 - 119486 1119 ## COG0217 Uncharacterized conserved protein 111 36 Op 4 . + CDS 119488 - 120288 899 ## COG0682 Prolipoprotein diacylglyceryltransferase + Term 120301 - 120333 4.2 + Prom 120305 - 120364 9.3 112 37 Op 1 29/0.000 + CDS 120397 - 120810 470 ## COG2001 Uncharacterized protein conserved in bacteria 113 37 Op 2 . + CDS 120812 - 121732 824 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 114 37 Op 3 . + CDS 121734 - 122108 340 ## Apre_1206 hypothetical protein 115 37 Op 4 28/0.000 + CDS 122127 - 123077 781 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 116 37 Op 5 4/0.000 + CDS 123047 - 124396 1435 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 117 37 Op 6 . + CDS 124387 - 125466 1144 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 118 37 Op 7 . + CDS 125467 - 126258 438 ## Apre_1202 polypeptide-transport-associated domain-containing protein FtsQ-type 119 37 Op 8 . + CDS 126297 - 127403 1375 ## COG0206 Cell division GTPase 120 37 Op 9 . + CDS 127405 - 127872 421 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 121 37 Op 10 . + CDS 127898 - 129217 1468 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 122 37 Op 11 . + CDS 129207 - 130595 1790 ## COG0017 Aspartyl/asparaginyl-tRNA synthetases 123 37 Op 12 . + CDS 130604 - 133006 2671 ## COG0495 Leucyl-tRNA synthetase + Term 133061 - 133098 0.2 + Prom 133031 - 133090 7.5 124 38 Op 1 . + CDS 133118 - 133747 448 ## COG0398 Uncharacterized conserved protein 125 38 Op 2 . + CDS 133756 - 134094 349 ## Apre_1195 hypothetical protein + Term 134136 - 134173 3.3 - Term 134268 - 134312 8.5 126 39 Op 1 . - CDS 134347 - 134757 395 ## Elen_0185 hypothetical protein 127 39 Op 2 . - CDS 134738 - 135418 349 ## Clos_0666 hypothetical protein - Term 135451 - 135478 -0.8 128 39 Op 3 . - CDS 135481 - 136029 570 ## Apre_1074 transcriptional regulator, TetR family 129 39 Op 4 . - CDS 136079 - 136399 302 ## Apre_1192 hypothetical protein - Prom 136420 - 136479 10.0 + Prom 136461 - 136520 5.5 130 40 Op 1 . + CDS 136569 - 136973 428 ## COG1396 Predicted transcriptional regulators 131 40 Op 2 . + CDS 136983 - 137330 312 ## Apre_1190 hypothetical protein + Term 137546 - 137588 -0.4 - Term 137330 - 137365 2.1 132 41 Op 1 35/0.000 - CDS 137372 - 139132 213 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 133 41 Op 2 . - CDS 139129 - 140838 234 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Prom 140953 - 141012 4.1 134 42 Tu 1 . - CDS 141027 - 141641 732 ## Apre_1187 hypothetical protein - Prom 141662 - 141721 7.7 + Prom 141611 - 141670 7.0 135 43 Op 1 4/0.000 + CDS 141694 - 143883 1492 ## COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) 136 43 Op 2 . + CDS 143880 - 144896 730 ## COG1466 DNA polymerase III, delta subunit + Term 144979 - 145021 1.3 137 44 Tu 1 . - CDS 145175 - 145363 132 ## gi|227486715|ref|ZP_03917031.1| hypothetical protein HMPREF0072_2118 - Prom 145406 - 145465 5.0 - Term 145392 - 145437 6.2 138 45 Tu 1 . - CDS 145504 - 145761 408 ## PROTEIN SUPPORTED gi|227486716|ref|ZP_03917032.1| 30S ribosomal protein S20 - Prom 145892 - 145951 12.6 + Prom 145829 - 145888 10.4 139 46 Op 1 14/0.000 + CDS 145908 - 146480 700 ## COG0681 Signal peptidase I 140 46 Op 2 . + CDS 146496 - 148307 2124 ## COG0481 Membrane GTPase LepA + Term 148313 - 148342 -0.2 141 47 Op 1 . - CDS 148323 - 149168 715 ## Cphy_3232 hypothetical protein 142 47 Op 2 . - CDS 149161 - 149643 448 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog - Prom 149675 - 149734 8.9 + Prom 149670 - 149729 3.3 143 48 Op 1 . + CDS 149749 - 150609 541 ## PROTEIN SUPPORTED gi|228004009|ref|ZP_04050993.1| acetyltransferase, ribosomal protein N-acetylase 144 48 Op 2 . + CDS 150602 - 151723 979 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 145 49 Tu 1 . + CDS 151784 - 152737 1249 ## COG1250 3-hydroxyacyl-CoA dehydrogenase + Term 152744 - 152775 -0.8 + Prom 152740 - 152799 6.5 146 50 Op 1 21/0.000 + CDS 152908 - 153906 889 ## COG1420 Transcriptional regulator of heat shock gene 147 50 Op 2 29/0.000 + CDS 153923 - 154474 644 ## COG0576 Molecular chaperone GrpE (heat shock protein) 148 50 Op 3 31/0.000 + CDS 154486 - 156300 2667 ## COG0443 Molecular chaperone + Term 156352 - 156386 3.1 + Prom 156318 - 156377 4.9 149 50 Op 4 . + CDS 156397 - 157518 1313 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 150 50 Op 5 1/0.000 + CDS 157515 - 158813 486 ## PROTEIN SUPPORTED gi|227413264|ref|ZP_03896450.1| SSU ribosomal protein S12P methylthiotransferase 151 50 Op 6 . + CDS 158871 - 159212 361 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 152 50 Op 7 . + CDS 159254 - 159436 304 ## PROTEIN SUPPORTED gi|227486730|ref|ZP_03917046.1| ribosomal protein S21 + Term 159445 - 159477 3.1 - Term 159472 - 159514 2.9 153 51 Op 1 . - CDS 159527 - 159706 143 ## gi|227486731|ref|ZP_03917047.1| hypothetical protein HMPREF0072_2134 154 51 Op 2 1/0.000 - CDS 159715 - 160533 1044 ## COG0313 Predicted methyltransferases 155 51 Op 3 . - CDS 160533 - 161243 783 ## COG4123 Predicted O-methyltransferase - Prom 161314 - 161373 7.1 + Prom 161277 - 161336 5.0 156 52 Op 1 . + CDS 161362 - 162711 1626 ## COG1109 Phosphomannomutase 157 52 Op 2 . + CDS 162761 - 163021 165 ## Apre_1151 hypothetical protein + Prom 163029 - 163088 2.3 158 53 Op 1 . + CDS 163108 - 163257 277 ## PROTEIN SUPPORTED gi|227486736|ref|ZP_03917052.1| ribosomal protein L33 159 53 Op 2 . + CDS 163266 - 163448 114 ## Apre_1149 preprotein translocase, SecE subunit 160 53 Op 3 45/0.000 + CDS 163456 - 164034 801 ## COG0250 Transcription antiterminator 161 53 Op 4 55/0.000 + CDS 164093 - 164521 701 ## PROTEIN SUPPORTED gi|227486739|ref|ZP_03917055.1| ribosomal protein L11 162 53 Op 5 43/0.000 + CDS 164558 - 165271 1189 ## PROTEIN SUPPORTED gi|227486740|ref|ZP_03917056.1| ribosomal protein L1 + Prom 165299 - 165358 2.8 163 53 Op 6 47/0.000 + CDS 165469 - 166017 894 ## PROTEIN SUPPORTED gi|227486741|ref|ZP_03917057.1| ribosomal protein L10 164 53 Op 7 . + CDS 166051 - 166434 590 ## PROTEIN SUPPORTED gi|227486742|ref|ZP_03917058.1| ribosomal protein L7/L12 + Term 166463 - 166508 6.4 + Prom 166502 - 166561 9.0 165 54 Tu 1 . + CDS 166675 - 167118 446 ## COG0735 Fe2+/Zn2+ uptake regulation proteins + Prom 167126 - 167185 4.0 166 55 Op 1 . + CDS 167268 - 167534 295 ## CLOST_1866 hypothetical protein 167 55 Op 2 . + CDS 167573 - 167797 283 ## Apre_1141 hypothetical protein + Term 167803 - 167847 1.0 - TRNA 167870 - 167945 85.0 # Thr GGT 0 0 + Prom 169341 - 169400 5.2 168 56 Tu 1 . + CDS 169469 - 170755 1226 ## COG1306 Uncharacterized conserved protein + Term 170880 - 170913 -0.9 - Term 170830 - 170859 1.4 169 57 Tu 1 . - CDS 170867 - 171715 689 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 171791 - 171850 11.7 + Prom 171841 - 171900 10.3 170 58 Op 1 31/0.000 + CDS 171960 - 173627 1734 ## COG0358 DNA primase (bacterial type) 171 58 Op 2 5/0.000 + CDS 173614 - 175416 1848 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 172 58 Op 3 9/0.000 + CDS 175417 - 176109 684 ## COG2384 Predicted SAM-dependent methyltransferase 173 58 Op 4 . + CDS 176091 - 176864 698 ## COG0327 Uncharacterized conserved protein + Prom 177370 - 177429 14.3 174 59 Op 1 . + CDS 177495 - 178802 1800 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 178815 - 178854 -0.1 175 59 Op 2 . + CDS 178859 - 179644 820 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 176 59 Op 3 . + CDS 179644 - 180636 739 ## COG2348 Uncharacterized protein involved in methicillin resistance - Term 180641 - 180683 8.4 177 60 Tu 1 . - CDS 180693 - 181205 630 ## COG2077 Peroxiredoxin - Prom 181299 - 181358 6.0 + Prom 181283 - 181342 9.7 178 61 Tu 1 . + CDS 181365 - 182015 1076 ## PROTEIN SUPPORTED gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein + Term 182025 - 182062 1.4 + Prom 182038 - 182097 7.2 179 62 Op 1 4/0.000 + CDS 182121 - 182744 597 ## COG0125 Thymidylate kinase 180 62 Op 2 1/0.000 + CDS 182746 - 183075 301 ## COG3870 Uncharacterized protein conserved in bacteria 181 62 Op 3 1/0.000 + CDS 183072 - 183860 515 ## COG2812 DNA polymerase III, gamma/tau subunits 182 62 Op 4 . + CDS 183860 - 184669 608 ## COG1774 Uncharacterized homolog of PSP1 + Prom 184712 - 184771 9.5 183 63 Tu 1 . + CDS 184793 - 184966 318 ## Apre_1124 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein + Term 184981 - 185020 4.2 + Prom 185237 - 185296 11.5 184 64 Op 1 . + CDS 185405 - 186562 862 ## Apre_0746 hypothetical protein 185 64 Op 2 . + CDS 186563 - 187312 462 ## FMG_0111 hypothetical protein 186 64 Op 3 . + CDS 187320 - 189413 175 ## PROTEIN SUPPORTED gi|169827482|ref|YP_001697640.1| 30S ribosomal protein S1-like protein 187 64 Op 4 . + CDS 189413 - 191125 2118 ## COG0442 Prolyl-tRNA synthetase 188 64 Op 5 . + CDS 191187 - 192050 1256 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 192065 - 192092 -0.1 189 64 Op 6 9/0.000 + CDS 192097 - 193404 1438 ## COG1158 Transcription termination factor 190 64 Op 7 . + CDS 193471 - 193674 372 ## PROTEIN SUPPORTED gi|227486769|ref|ZP_03917085.1| ribosomal protein L31 191 64 Op 8 32/0.000 + CDS 193727 - 194521 241 ## PROTEIN SUPPORTED gi|225303543|ref|ZP_03740066.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 192 64 Op 9 . + CDS 194525 - 195601 1345 ## COG0216 Protein chain release factor A + Term 195602 - 195656 2.5 + Prom 195603 - 195662 6.2 193 65 Op 1 . + CDS 195695 - 196531 604 ## COG0053 Predicted Co/Zn/Cd cation transporters 194 65 Op 2 . + CDS 196541 - 197575 904 ## COG0009 Putative translation factor (SUA5) 195 65 Op 3 . + CDS 197587 - 198216 831 ## COG0035 Uracil phosphoribosyltransferase 196 65 Op 4 . + CDS 198226 - 199503 1575 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase 197 65 Op 5 . + CDS 199506 - 201662 2025 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 198 65 Op 6 . + CDS 201652 - 202281 483 ## COG1040 Predicted amidophosphoribosyltransferases + Term 202284 - 202323 3.0 - Term 202272 - 202309 6.4 199 66 Tu 1 . - CDS 202316 - 203698 1352 ## COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) - Prom 203741 - 203800 6.0 - Term 203760 - 203799 5.4 200 67 Op 1 . - CDS 203817 - 203969 96 ## 201 67 Op 2 . - CDS 204015 - 205367 1337 ## COG1982 Arginine/lysine/ornithine decarboxylases - Prom 205426 - 205485 5.0 + Prom 205206 - 205265 6.5 202 68 Op 1 . + CDS 205454 - 206326 759 ## COG1316 Transcriptional regulator 203 68 Op 2 . + CDS 206365 - 206883 692 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins + Term 206896 - 206929 -0.9 + Prom 206936 - 206995 9.1 204 69 Op 1 . + CDS 207067 - 207996 1152 ## COG2214 DnaJ-class molecular chaperone 205 69 Op 2 . + CDS 207998 - 210574 1732 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 210592 - 210650 8.8 + Prom 210682 - 210741 6.9 206 70 Op 1 12/0.000 + CDS 210762 - 212882 2111 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 207 70 Op 2 . + CDS 212879 - 213379 376 ## COG0602 Organic radical activating enzymes 208 70 Op 3 8/0.000 + CDS 213404 - 213991 898 ## COG1704 Uncharacterized conserved protein 209 70 Op 4 . + CDS 214023 - 214853 770 ## COG1512 Beta-propeller domains of methanol dehydrogenase type 210 70 Op 5 . + CDS 214863 - 215366 731 ## FMG_0135 hypothetical protein 211 71 Tu 1 . - CDS 215425 - 216093 499 ## COG0819 Putative transcription activator - Prom 216266 - 216325 8.0 + Prom 216104 - 216163 8.4 212 72 Tu 1 . + CDS 216335 - 217036 988 ## COG0500 SAM-dependent methyltransferases + Term 217104 - 217154 9.1 - Term 217091 - 217140 5.1 213 73 Tu 1 . - CDS 217146 - 217661 461 ## Apre_0997 hypothetical protein - Prom 217726 - 217785 3.1 214 74 Tu 1 . + CDS 217570 - 217767 71 ## + Term 218003 - 218041 1.8 215 75 Tu 1 . - CDS 217807 - 218559 938 ## COG0778 Nitroreductase - Prom 218739 - 218798 8.8 + Prom 218432 - 218491 5.4 216 76 Op 1 . + CDS 218616 - 220955 1830 ## COG1199 Rad3-related DNA helicases 217 76 Op 2 . + CDS 220936 - 222306 1302 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Term 222476 - 222508 1.5 + Prom 222437 - 222496 9.0 218 77 Tu 1 . + CDS 222621 - 223208 505 ## FMG_1423 hypothetical protein + Prom 223284 - 223343 11.1 219 78 Tu 1 . + CDS 223593 - 223946 394 ## Apre_0680 hypothetical protein + Term 223995 - 224029 3.0 + Prom 224032 - 224091 10.2 220 79 Tu 1 . + CDS 224304 - 225614 728 ## Smon_0660 hypothetical protein + Prom 225616 - 225675 4.9 221 80 Op 1 . + CDS 225885 - 226451 320 ## Smon_0661 hypothetical protein 222 80 Op 2 . + CDS 226445 - 229543 1446 ## COG1204 Superfamily II helicase 223 81 Tu 1 . - CDS 229949 - 230230 362 ## MGAS10750_Spy1711 hypothetical protein + Prom 232032 - 232091 80.4 224 82 Op 1 . + CDS 232225 - 232836 533 ## FMG_0941 hypothetical protein 225 82 Op 2 . + CDS 232854 - 233435 517 ## FMG_0940 hypothetical protein 226 82 Op 3 34/0.000 + CDS 233460 - 234161 387 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 227 82 Op 4 . + CDS 234154 - 235545 825 ## COG1122 ABC-type cobalt transport system, ATPase component 228 82 Op 5 35/0.000 + CDS 235581 - 237323 1046 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 229 82 Op 6 1/0.000 + CDS 237320 - 239053 216 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 230 82 Op 7 . + CDS 239090 - 240439 1044 ## COG0534 Na+-driven multidrug efflux pump + Term 240553 - 240607 -0.3 + Prom 240544 - 240603 8.6 231 83 Tu 1 . + CDS 240759 - 241169 474 ## FMG_0934 hypothetical protein + Term 241185 - 241241 10.2 + Prom 241521 - 241580 6.7 232 84 Op 1 . + CDS 241605 - 241814 238 ## FMG_0933 putative transposon excisionase + Term 241834 - 241877 -0.7 233 84 Op 2 . + CDS 241892 - 243127 833 ## COG0582 Integrase + Term 243161 - 243212 -0.9 + Prom 243177 - 243236 4.6 234 85 Tu 1 . + CDS 243284 - 243730 736 ## COG0073 EMAP domain + Term 243747 - 243790 9.1 + Prom 243771 - 243830 10.9 235 86 Tu 1 . + CDS 244023 - 244241 333 ## COG3655 Predicted transcriptional regulator + Term 244431 - 244477 0.6 236 87 Tu 1 . + CDS 244669 - 245163 178 ## gi|227486817|ref|ZP_03917133.1| conserved hypothetical protein - Term 245431 - 245491 4.3 237 88 Tu 1 . - CDS 245504 - 245932 538 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 245964 - 246023 9.2 + Prom 245920 - 245979 8.8 238 89 Tu 1 . + CDS 246220 - 246546 345 ## M28_Spy1086 hypothetical protein + Prom 246842 - 246901 6.2 239 90 Op 1 . + CDS 246949 - 247365 202 ## gi|227500047|ref|ZP_03930118.1| conserved hypothetical protein 240 90 Op 2 . + CDS 247368 - 247571 165 ## COG1476 Predicted transcriptional regulators 241 90 Op 3 . + CDS 247601 - 248026 481 ## gi|227486823|ref|ZP_03917139.1| conserved hypothetical protein + Term 248102 - 248139 1.2 + Prom 248776 - 248835 1.9 242 91 Op 1 . + CDS 248946 - 249596 541 ## HMPREF0868_0528 hypothetical protein 243 91 Op 2 . + CDS 249597 - 249794 172 ## SDEG_1341 hypothetical protein 244 91 Op 3 . + CDS 249778 - 250344 70 ## SDEG_1341 hypothetical protein + Prom 250415 - 250474 8.1 245 92 Op 1 . + CDS 250592 - 250981 328 ## gi|227486828|ref|ZP_03917144.1| hypothetical protein HMPREF0072_2231 246 92 Op 2 . + CDS 250996 - 251439 524 ## TDE1585 hypothetical protein + Term 251534 - 251569 3.1 Predicted protein(s) >gi|229269864|gb|GG666047.1| GENE 1 195 - 614 468 139 aa, chain + ## HITS:1 COG:RSc2200 KEGG:ns NR:ns ## COG: RSc2200 COG1132 # Protein_GI_number: 17546919 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Ralstonia solanacearum # 1 111 434 547 592 94 42.0 8e-20 MIFRDSILANIVLFEDESEIDFEKLNDAIKRSGLSSLIDNLKEGYNTIIKDAGSNLSGGE MQRIEIARALYKDCQIILIDEATSALDLKMARDIEEIFASLDKTLISISHRRDIDYSKYY GKIIEIKDKKTEEISVNKM >gi|229269864|gb|GG666047.1| GENE 2 723 - 1565 936 280 aa, chain + ## HITS:1 COG:BS_ylqF KEGG:ns NR:ns ## COG: BS_ylqF COG1161 # Protein_GI_number: 16078668 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Bacillus subtilis # 3 279 1 279 282 268 45.0 7e-72 MALNINWYPGHMKKTKEDIEKNLRLVDIVLEIIDARIPESSRNPMLDDILKDKPRMIIMN KSDLADNKENQKWIKKFKSDGIVALPMNSKERINVGKIYDIAREILADKFKKHEEKEIDN PIIRMMIVGVPNSGKSTFINNVAQRKGARVGNRPGVTQTKQWIKTNSNLQLLDTPGVLWP KFDDRTGLHLSFTNAIKDEILNIEDLTLYFLKEIAKEYPENLKERYGVDPSAEAIDIYEA IAKKRGAIIAGGDFDYTRTASIILNDFRTGKLGRITLEKL >gi|229269864|gb|GG666047.1| GENE 3 1562 - 2185 555 207 aa, chain + ## HITS:1 COG:SP1156 KEGG:ns NR:ns ## COG: SP1156 COG0164 # Protein_GI_number: 15901021 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Streptococcus pneumoniae TIGR4 # 11 195 61 246 259 177 48.0 2e-44 MKYSLYNDEIKKEIYETYDLIAGIDEVGRGPLAGPVVTCAVIMKKNSHIEGVTDSKKLSR KKMLVLKEKILADALAVSYGFANSRKIDQINIRQATLQAMKDALDHLEIRPDIVLIDAER IDTDLPQLNIVKGDLNEYAISCASILAKVRRDDIMINFSKIYPGYGFETNFGYGTKAHYQ GLEQHGETPIHRQSFLRKFHERQLSFI >gi|229269864|gb|GG666047.1| GENE 4 2182 - 2529 379 115 aa, chain + ## HITS:1 COG:CAC1763 KEGG:ns NR:ns ## COG: CAC1763 COG0792 # Protein_GI_number: 15895040 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Clostridium acetobutylicum # 5 115 6 120 122 81 39.0 5e-16 MTRKREIGDFGEEFTASYLEKKGYRILDRNYSKPFGEIDVIAIKDDLIAFVEVKTRNSDD FAYAAESVDFYKQQRIRRASQAYLVENDMTDFLMSFDVSEIYLDTRKINYIENAF >gi|229269864|gb|GG666047.1| GENE 5 2519 - 3610 956 363 aa, chain + ## HITS:1 COG:lin1313 KEGG:ns NR:ns ## COG: lin1313 COG0758 # Protein_GI_number: 16800381 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Listeria innocua # 79 287 74 281 286 206 50.0 4e-53 MLFDMDKREILLYLNYININNRIILEIFEHTGLDNFFELTRVDYSFLNDANYERIFSPKS LKDFKAYREKVARLGVDFVTILDEAYPENLKYIDDRPAVLYYKGRLDHSRDSQSIAFVGA RKCTDYGKWACKNLAGSIAGAGLATVSGLAYGIDAMCHKATLDVGGRTIGVIGCGIDQVY PTANKFLYEKIEEDGLILSEFPLETPPIGYNFPRRNRIISGISLATVVIEAKEKSGTMIT TRCALEQGKEVFAVPGNINSIYSKGTNKLIQDGSKLILCAEDILEELDYLLDKKVQKKTI DYTALDKDEASVVRYIENNPNASADDLALNLDFEIDVINFILTSLELKNIIENIGNNEFT IKE >gi|229269864|gb|GG666047.1| GENE 6 3615 - 5672 2326 685 aa, chain + ## HITS:1 COG:BH2467_1 KEGG:ns NR:ns ## COG: BH2467_1 COG0550 # Protein_GI_number: 15615030 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Bacillus halodurans # 1 544 1 550 550 579 54.0 1e-165 MAKNLVIVESPTKARSISKMLGRNYKVKATVGHLRDLPKSKFGVDIENNFEPEYIKVRGR AKTINELKKEAKTADKVYLATDPDREGEAISWHLEYLLDLDPNENNRVEFHEITKNNVLA AMKKPRKIDKNLVDAQQARRVMDRIVGYEISPILWKRVKSGLSAGRVQSVALKLIVDRQK EIDEFIPEEYWTITAKHKYGDISFESEFYGTKTKKMKVANEAGAKKVLEKIDKDNFKVES ISKTKRKRRPYAPYTTSTLQQDASNRLGFSTKFTMQLAQQLYEGIDIGKDGTVGLISYMR TDATRISKEIVGESLKYIKEKYGAEYAGKGNTYSGKKKGSQDAHEAIRPTSIFRDPISIK TYLTDQQYKLYKLIWSRVVASQMADYEYLSTQINYDNNGIIFRSNGKITIFDGFNKLSGS LDNENILPDLKEGEVISAEKIEKDQHFTNPPARYTEASLVKTLEEFGIGRPSTYSATINQ IISRNYVELDGRSIYPTKLGKTVNEFLQENFDDVINVEFTADMENQLDKIAEDGVNWKDV LNAFYKDFRKDMDAVKKDTTDYKVKDKVLDEKCPKCGKALAVKHGRNGKFIGCTGFPECD FTKSIIKTTGVKCPKCKDGEIIEKVSKRGKRFYGCDNYPKCDYALWDPPTGETCPECGNL LIHKKNRNTDEIRCSACDYVKVKKR >gi|229269864|gb|GG666047.1| GENE 7 5712 - 6125 484 137 aa, chain - ## HITS:1 COG:mlr5692 KEGG:ns NR:ns ## COG: mlr5692 COG1970 # Protein_GI_number: 13474738 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Mesorhizobium loti # 1 101 18 132 157 101 41.0 3e-22 MLKEFKEFITRGNVLDMAIGIIMGSAFTAIVTSVVEDLLMPIIAGLTSGINYEDLVINIA GAQLKLGSFINSVITFLIIAFVLFLMIKSINLFHKKKEEPKVENEKDCPYCKSKIDIDAT RCPNCTSKLENYSNSNE >gi|229269864|gb|GG666047.1| GENE 8 6230 - 6820 428 196 aa, chain + ## HITS:1 COG:SPy2170 KEGG:ns NR:ns ## COG: SPy2170 COG0494 # Protein_GI_number: 15675908 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pyogenes M1 GAS # 5 185 7 188 213 126 42.0 3e-29 MKYLQVDQEFLDKLKSYAVFIPLIEVDGKDHILFEVRSESVSQPGEVSFPGGRLEGGEDF SEAAIRETIEELGLKESDIDYLGYSSMILTSSYRHIKSFYGRINKNLQEIKYNNEVESIF TVDIDFFKNNPPISYMAPYRMDFPKDFPFDKIPNGKDYKFQTGYNEMFFYDTKPVIWGLT AKMLKNFIESWSNNEK >gi|229269864|gb|GG666047.1| GENE 9 6810 - 7640 904 276 aa, chain + ## HITS:1 COG:no KEGG:Apre_1286 NR:ns ## KEGG: Apre_1286 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 275 1 275 276 279 56.0 1e-73 MRNDISQKIKEYAKTNPAIESIFYVKRLNNDEFYSVYTVANEIIIAKLEEEFKGLFDDVI FVNRVKEKAELDKNKFSFTTIDLYKMDNIKVSESIISSDIAKDFIKTLPTDIEFLYNKAG SEALLPNKEFTYNPVKEYEFSQTVKNFFAYAIEISLYLNQNNTLAAAIRMENLRDELIKM LRIHVVNKYKGGMDVGRDGRNFAHTLSKEYKDDLEDTFHDINPLNIYNSLFKATILFRKV GMAEAEELGFDYDKQTDVNTLKLLRNNYKKLESFLN >gi|229269864|gb|GG666047.1| GENE 10 7649 - 8857 1326 402 aa, chain + ## HITS:1 COG:BS_dacF KEGG:ns NR:ns ## COG: BS_dacF COG1686 # Protein_GI_number: 16079405 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Bacillus subtilis # 4 394 2 388 389 146 31.0 8e-35 MKYKYKLASLIMAAFIFLMPISLAAGQNKIVGLDENVKAYIIANEENGEVYYEKNADEPR AMASLSKLMTFLVTMDAIHSGALKLDTKVKADKEAEKLTSWEYSSLGVKEGETYTVDELL KGLIAVSGNDCAYLLANTVSVSEPAFAREMNEKAKELDLKSQVYYNSSGVQTEDGYQNTS SARDLFKLSQYILKTYPEILDYAAIREIKDPGRDIDKKSTIPLMDEIKGVDGLKTGTTDE AGYCLVTTVDMSKLDSNDDFRSIGVVMGADQKDTRNKVMSDLIYYVSKYFSTRVVLDTNV PIKSLKDITVKQGYIDLYPKEDIKMIIKEGENPTIKYNIKDDIKAPIKENEDLGEVEVSY KDESHTVGLFSKKALDRASLFSRVVRTVKDTCDFLLKTIIAR >gi|229269864|gb|GG666047.1| GENE 11 8969 - 9445 405 158 aa, chain + ## HITS:1 COG:lin2867 KEGG:ns NR:ns ## COG: lin2867 COG0590 # Protein_GI_number: 16801927 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Listeria innocua # 11 157 5 152 154 124 45.0 1e-28 MQDLFTKADKFFMTEAINEAKLAKSIDEVPIGAVVVCGDRIVGRGHNFTYKGKSALNHAE IYALKEAGKNIGDFRLEECTMYVTLEPCLMCAGAIMHSRVKRLVIACKDPKRGGFSTSFI DKDSPHLNVPEISYGLMEEESLKELQSFFRALREKKKS >gi|229269864|gb|GG666047.1| GENE 12 9582 - 10529 1136 315 aa, chain + ## HITS:1 COG:CAC0089 KEGG:ns NR:ns ## COG: CAC0089 COG0111 # Protein_GI_number: 15893385 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Clostridium acetobutylicum # 1 311 1 314 318 241 42.0 1e-63 MKISLIDPLEVKESYILEQKEKLEKLGHEFTYYKESAKDCEEKIARLKDADIAMITNKPI SRKVIENTNLKLIDVAFTGVDHVDLEASKEKGIKVLNASGYSDDSVAELVIGLTIGVLRK FNQNRENIFERQNNYLLGSLIKGKTFGVIGTGHIGKKLIELLQVFGCKIIAFSRTEKDDI KALGVEYVDLNTLLKESDIVSLHIPNNKETKHFLGKDQLDLMKEGAVLINCARGAVVDND YLAKLLNEDKLRAGIDVFDMEPPLPEDYPLRNAKNVILTNHVAFYTEEAMQIRADIVFDN LYSYLKGEIKNEISL >gi|229269864|gb|GG666047.1| GENE 13 10526 - 11155 632 209 aa, chain + ## HITS:1 COG:DR0159 KEGG:ns NR:ns ## COG: DR0159 COG0572 # Protein_GI_number: 15805196 # Func_class: F Nucleotide transport and metabolism # Function: Uridine kinase # Organism: Deinococcus radiodurans # 4 199 7 203 210 198 47.0 5e-51 MIEPKIVAIAGGSASGKSTIVKIIAEKFKDDLVVVGHDNYYRAHDDIDFEERKLLNYDHP QAFDTDLFCEDLKKLLAGLEIDMPLYDYKIHTRSKDTVKVRAKKIILIEGILVLYDKKIR ELTDTKVFVDADSDIRLKRRILRDTVERGRSLESCLTQYIEQVKPMHEKYVEPSKKYADI IIPRGAKNIKGIEILSKHIENIIGNTNES >gi|229269864|gb|GG666047.1| GENE 14 11145 - 12950 1637 601 aa, chain + ## HITS:1 COG:FN0856 KEGG:ns NR:ns ## COG: FN0856 COG0296 # Protein_GI_number: 19704191 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Fusobacterium nucleatum # 24 600 21 611 611 373 39.0 1e-103 MKVNIIPTNYKEIKDYIEGNSTIGHKIWGAIPYEDGYIFRVYAPNADEVYIKGDFTNWQN ERLIKNDEFGYFYGFYKAKVNDYYKYIVVKNGNWMEKTDPFAHAMDGEGDFAAKITAEDD YVFNDDEFIKTRGKNYDKPLNIYELHIGSFMRFSGNVNFLDIVDNLINHIKEMGYTHVEI MPVTEYPFYPSWGYQSTGFFAISHRYGTVRDFKKFVDLLHQNGIGVILDVVAVHYASDYY GLDHFDGTAMYESQYMDLKYSEWGSNNFDYSKGHVRSFMKSSMAYLIEEFHLDGIRIDAV SYMVFYNGNKNRGVHEDNIFFIKNLNETLEKLHPDVMRIAEDSSDYPKVTHPVCEGGLGF DYKWDMGWMNDTLRYFKVDSFNRRDYQSKINFSMFYFYNERFILPLSHDEVVHLKKSMLD KMNGSYEDKFKQLKVLMTYQMTHPGKILNFMGNEIATFEEWNENVGIRWDYLAYPIHDSY NCFIKDLNKLYKDEKAFYKYDYDMAGFQWRVVDDNTNSVFAYERKADEDRYLVILNMANV YQPYYEIYYDEDLVFEEVFNSLDEKYGEYRNNKRRIEVKKGNNLGLELWQYEAVIFKIKK L >gi|229269864|gb|GG666047.1| GENE 15 12947 - 13414 504 155 aa, chain + ## HITS:1 COG:no KEGG:Apre_1279 NR:ns ## KEGG: Apre_1279 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 155 1 155 155 204 71.0 1e-51 MKERKPINLSWLVEKWTLIDEDTYLKNMWLNTESLDFIRINKEIQTNEDIEASYIDIDQD VEKYILMPGTSEIDNSDIRDAFISSLDRRERDYFIENAEFISPSAEFLDTVYELGLEGRW NDFRDKVAAGMLLSWAEDEGLPVNKDMETININKI >gi|229269864|gb|GG666047.1| GENE 16 13411 - 14544 1358 377 aa, chain + ## HITS:1 COG:CAC2761 KEGG:ns NR:ns ## COG: CAC2761 COG1477 # Protein_GI_number: 15896017 # Func_class: H Coenzyme transport and metabolism # Function: Membrane-associated lipoprotein involved in thiamine biosynthesis # Organism: Clostridium acetobutylicum # 69 370 21 307 327 141 31.0 2e-33 MKKLLMILALATSLTACANTKESVEKPKVEAVKEDSSQEEGKNTDSGEEVNNSGELEKHT ENIYEYFDTITNFIAYTKDQEEFDHYVKVLKDELKIYHELYNSYDAFDGVNNFRTINENA GKEPVKVDPKVIELVEYSKKMYKLTNGKINIAMGSLLGLWHEYREMSLDNPDKAAIPEES MLVKASKHKDIDSIVVDEKAGTVFIKDPDVQIDIGAIGKGYATKIIANILQKEGLKHGIL SVGGDDVLIGDNPASENSYYKIGIQNPNLDDKENPYSSIVSLKNTSVVTSGDYQRYFMVN GKRYHHIIDPATMYPSTRWRSVSVILDDIAKADTISTYLFIIDLEEGREFAKKVGAEVLW IDENYKSYKTEGWPEVE >gi|229269864|gb|GG666047.1| GENE 17 14610 - 15263 576 217 aa, chain + ## HITS:1 COG:FN1695 KEGG:ns NR:ns ## COG: FN1695 COG2148 # Protein_GI_number: 19705016 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Fusobacterium nucleatum # 20 217 5 203 230 157 44.0 1e-38 MNKVNEDLIYEKLNNKKVSLFFKRFFDILVSLIVLIIIAIPMIIVAIAIKLDSKGPVFYK QERLAKGKRPFYIIKFRTMRVGADKNLDNLTVKNDPRITKTGAFLRKWKIDELPQFINVL KGDMSLVGPRPETPKMVNLYPNYYDVIFAVRPGITDYASIEFRNESEYYNSIEDSEKIYL EKILPIKIDLKLKYIENLSIKTDISILLKTAMTIITK >gi|229269864|gb|GG666047.1| GENE 18 15336 - 16808 1649 490 aa, chain + ## HITS:1 COG:SPy1343 KEGG:ns NR:ns ## COG: SPy1343 COG4868 # Protein_GI_number: 15675279 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pyogenes M1 GAS # 3 486 28 512 518 537 53.0 1e-152 MKIAFDNDKYIKEQSAKIVERISHFDKLYLEFGGKLFDDAHASRVLPGFLPDSKLRMLLN IKDKTEIIITINAKDIEKTKIRGDNGISYDTEAIRLKSALEDFGFLVSAIVITQFNYQEK VLKYCQYLDNLGIKNYKTYDIVGYPNNLATIISDEGFGKNDHVKTTRPLVVVTGPGPGSG KMATCLSQMYLDHENGVNAGYAKFETFPIWSIPLKHPVNIAYEAATADLDDVNMIDPYHL EAYGKSAVSYNRDVEAFPILKKMFEKIMGKSPYMSPTDMGVNMSGFCIVDDKAAADASKA EIIRRYYNTLVDYRMAKENLHTLEKIEILMSQLEISADDRLVALAARDREKSSGTEAFAI ELDSGEIITGKKSDLLSAPSACILNVLKKLGKLDDEILLISPHIIEPVSDLKTKGLGGNE TSLSVNEMLIALSISATTNPLTHMAIKQLGKLKGLDAHSTVILNDSQKSMLRKLGLNFTQ DPEFSQDNYR >gi|229269864|gb|GG666047.1| GENE 19 16852 - 18984 1889 710 aa, chain - ## HITS:1 COG:lin2791 KEGG:ns NR:ns ## COG: lin2791 COG1409 # Protein_GI_number: 16801852 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Listeria innocua # 5 346 34 324 443 91 26.0 5e-18 MDTNVKKTFDMSIISDPHVLCESLIANTESLRKELKVERKLVVESENLFKKALSLVDEVQ SKFLIISGDISKEGELISHKKAASLLKAWQDKAPDRKIFLIPGNHDINSKKAYDYKNDKK TQPTSPEDFYAIYDFIYQDSSILEFYKDSEIFKAYIDEVNKKYKREQKYSSYANGYFSYV ARIKKEDHYDNGLSIIMIDSSIYAADMEQGHRDGMNNVIGSVSTEQLRWIADKIDEAKAR NDMVIAVSHHAFIPNFRNQELVFSPFIIKEYKDKIKDSDPRLNNKTPIEVLADNGVRFIF TGHLHENGTAKFISEDGNEIYDIQTGSTITYPLPIRHLNIKNKSRTINGFEIEIKTELIK EFTYIDENKNSIHIENASMHTLENQLSLREVISNYIRIQANNPRLENINIKKEIIDQVNA NLKINAPYQGYMDRIVFPLVKDKFPINRTIIGSINLIEEMESYHIQIKTIGNRLSIYSND IEEALDVIFKQIEKDILYPPLMIYFFEKILNKIFKMPIDKEGHNFYDFANFIYQYRSNDI EKPAYITSMIDRLNDKSYNIINDLIDYAGDEINEAFDYVTTNIIFIKYGSKNRFYDDLIK THGLTANLTYKYMRSKVNNLRDLLNLLSKFIIKKSQISGVDLAKEIAHSKLVRKFKMDMS DKMFGQKSLRKFITDMIGEMNKDMAETYQNDTDNDVDYYFNYIEFDDSDN >gi|229269864|gb|GG666047.1| GENE 20 19167 - 20375 1640 402 aa, chain + ## HITS:1 COG:ECs5052 KEGG:ns NR:ns ## COG: ECs5052 COG3303 # Protein_GI_number: 15834306 # Func_class: P Inorganic ion transport and metabolism # Function: Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit # Organism: Escherichia coli O157:H7 # 31 387 43 405 478 173 30.0 6e-43 MNKKIVATLSAFVLAVSLSSCSNDSEIKTAEDYKDTYPDVYATYKANEDMSETKFGGSVQ VDYLEAHPNLRTYYDGYCFAKQYDRARGHVYALEDAINTKRPKPGASCLACKTIDFVKAL EKDGIDVNSMDFDQFVKDHPKMQTISCADCHLDTPGKIQVTRDHFKKQIDQGNVNGNNTK ADSLTCAQCHVEYYLDPETKEVGLPYKYGFETDDMLKYYDEIDFADWEHPQTGAKLLKAQ HPEYETMMGSVHDSAGLSCIDCHMPVFENEKGEKFRSHHWTSPLKSKENIKNSCLSCHAG KSEDEMIAWVEEVQKGVYDRTNEVSDELKKFVDLLAKHVKAGDLSDKDKAELQKIHRHAQ FKWDFVWVENGEGFHNSKKAHQNLDEAEELVKQGLEILKKYE >gi|229269864|gb|GG666047.1| GENE 21 20467 - 21699 1143 410 aa, chain + ## HITS:1 COG:slr2087 KEGG:ns NR:ns ## COG: slr2087 COG1333 # Protein_GI_number: 16330568 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ResB protein required for cytochrome c biosynthesis # Organism: Synechocystis # 13 382 38 416 458 93 23.0 6e-19 MKTGIILLVVIALLSVIGTVIPQGNQEEFYLQSYSNTWAKLILLCDFDKVFSAWWYILIT ILLLINLFLCSVNRFKVIFEKSFKDPEISPKLKEYQTWTRVKDDELSIFKKLNIRAYKKT EVDGKEVFYKFDGKIGYMGSWLTHLSLIIIILAFAYGRYRGFEEFVHGVPGTVMELENSS YKIKVDQYDVMFRKDYTVDQYITSLSILDKNDKEVDKGLAMVNKPFRFKDFNVYQNSTGW AYHALLFKDKKLLEDKLMYKGDVFVADNKKIALQFVDFYPDFDEKSMMKPRTKSPFLKHP VTLYAIFYDGFRVDMGLNHPGEPIEWEGYTFVIRDPQMFTLLQVANDPATPIALLGAILL MIGLFLAFYINPREVIVVRDDGFDYLHIRQAKHDKLHSKKYEKIIGEIKL >gi|229269864|gb|GG666047.1| GENE 22 21699 - 22520 698 273 aa, chain + ## HITS:1 COG:aq_2043 KEGG:ns NR:ns ## COG: aq_2043 COG0755 # Protein_GI_number: 15607018 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in cytochrome c biogenesis, permease component # Organism: Aquifex aeolicus # 7 273 37 310 312 162 36.0 7e-40 MNLVKVENILFYISLFGYLISMLLFIALFVNKTEKWGIRGRNVLTAAFLAHTLALGVRWV NAGRIPLSNQYEFATAFAWGIALCYLIFERKYKLLAMGTFVTPILFLIIGYAAMRDRTVR PLMPALDSKWLAVHVSLAILSYGAFAVAAGISAMFLMRDKFSSDSFLSKSMADKEQLDLI AYRIIAFGYIFLSLVMITGAIWAESAWGRYWAWDPKETWSFITWIIYSIYLHLRRSRGWE GKRAAIFAILGFICVVFTYIGVNTLLPSLHSYA >gi|229269864|gb|GG666047.1| GENE 23 22530 - 23081 361 183 aa, chain + ## HITS:1 COG:no KEGG:Apre_0198 NR:ns ## KEGG: Apre_0198 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 174 1 174 191 115 40.0 1e-24 MKKFKIKDLTFMAISIALMYVFGKVLYLMSRFFPIPGSRVIFTTPLFTFILTAAVLKTKK IGTISIVMGLLALILLRLTLFGAIAVGLTGILTDLTSLILIKSYTDYKSINKTLAFHSFY SIWTSYFLVSLFIENSTFVMGNIFFVFITSLILYFVAYYIGKLTIRLFESRKLLDNKTHS FKD >gi|229269864|gb|GG666047.1| GENE 24 23174 - 24076 536 300 aa, chain + ## HITS:1 COG:no KEGG:Apre_0532 NR:ns ## KEGG: Apre_0532 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 299 1 299 299 144 34.0 6e-33 MILTKNINKIMEPIFVIALSLLCLYFAQTSLIFIGIIPILFTIFYFNEGILSFLISAGGT YILGMIFTDREDIFTSFVPLLVISLGLIVLISLRFTARVQILTAFIITSLTFIFLYKYKM LVNNISMDKLAINLKTSFESSYPYRLDFDVYRLTTSLYPAILAWISMFYAILSVKIIRNY LSVVDETYTDITQLDELRLRPRDLLILLIIGLAFYFVGRFFSIGKIYILGNLILLSLMFF AINGLSLFDFMLKNSNLPLTRAFQWFFMLILIQILIIPLIIFGIADIFLDFRARRKNEEQ >gi|229269864|gb|GG666047.1| GENE 25 24063 - 25796 614 577 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|85057286|ref|YP_456202.1| exopolyphosphatase-related protein [Aster yellows witches'-broom phytoplasma AYWB] # 37 566 77 601 849 241 30 5e-74 MKNNEKFISTPNIVLIMAFPLLASIVVFYYNPTLGALGLFVSLLLFLFLKSINTTKAKEL QRYVDEVSYSFDSITKNVVFEMPFPIAIVEDDRKIKWHNSFFRDLFPDRTLIGEEIDTLI PDLGALEFDNEEIRTSKNVNISDKVIQFYYSTIFEDDNSKGLTFLYGIDNTYDESIKKLF KDKRLVFYSVFIDNYEDIRNSASSENRPKILGEIDRVINEYFKKYSCLVRKYENDRFMIL SEYQDYVEIHDDKFSILDKVRDINEGNALPPTLSIGVGIAGAKPSEIYSDSRDAINIALS RGGDQTVVKLEDNYEYFGGKTKAIEKTSKVRSRVISQALKRMMQTSSDIYIMGHNNPDMD SFGSSLGVYEGARTLDKEAYIILNEVTKPIENMYARATEELEELKNHILTEEEALKKISQ ASLVIVTDNHRKNSTEGPGLLDKTDNIFIIDHHRRGKDYIKKATISYIEPYASSASELVT EILSYLEEDFKARTAVAESLLAGITVDTKNFVYQTGVRTFEAASVLKRWGADSVYIKRMF KDDFEIVKYKSEVIADSFIVNDFIAVAHFNREKMGQP >gi|229269864|gb|GG666047.1| GENE 26 25793 - 26071 147 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|162447066|ref|YP_001620198.1| bipartite protein: signaling protein and ribosomal protein L9 [Acholeplasma laidlawii PG-8A] # 4 79 585 663 818 61 44 7e-86 MIASQAADDLLNIKGVLASFVLTRANNKIHISGRSLGDISVQLILERIGGGGHLTAAATQ LDMSMENAEKMLRKAIIEYIREEEENESNTNR >gi|229269864|gb|GG666047.1| GENE 27 26049 - 26498 732 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486605|ref|ZP_03916921.1| ribosomal protein L9 [Anaerococcus lactolyticus ATCC 51172] # 1 149 1 149 149 286 100 6e-76 MKVILTDNIVRVGVKGDLVDVKSGYFRNYLDPQGLAVKATKENMEELEKMRDQLKKEEAE NRKAAEALKEKIEGLTVEQKVRVGEDGKLFGSVTNKDIAEALANQGIELDRKRIEEVEKI DGLGEFVINARLYEGVNAELKVNVVAEVE >gi|229269864|gb|GG666047.1| GENE 28 26498 - 27829 1527 443 aa, chain + ## HITS:1 COG:CAC3715 KEGG:ns NR:ns ## COG: CAC3715 COG0305 # Protein_GI_number: 15896946 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Clostridium acetobutylicum # 1 438 1 438 442 346 42.0 4e-95 MTDGLRPLPYDFLSEQAIIGCILSKNSTFDSANQIIKPVDFYDSRTQRIYKSIVTMFEKD IKVDYVSLVSQLSSENILQEVGGEEFITEITLSSFYTPNIETYCKTVKEKSLLRSLIGAS EDIIDSSYKQTDDVSDILAIAENRIFEISQDSHSQGLVRVSETMDETLKQINELTLADGK ITGVATGLDVVDNKLSGLQNSQLILLAARPAMGKTALGLTMAWNAAKVGKSVAFFSLEMS TYQLNQRLLSMVSLVSLESIINGSIRDDDWTLLIDATKKIVKTDLYVDETPGIRLSEMKS KLKRLKAERGLDLVVIDYLQLMQADGRQENRQNEIASISRGLKSLSKELNCPILSLAQLS READKRADHRPILSDLRESGAIEQDADVVMLLYREDYYDEEVEPNQAKVIFAKHRNGATG TVDLFFNKQCTTFTDLSLREENV >gi|229269864|gb|GG666047.1| GENE 29 27822 - 28376 569 184 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228003785|ref|ZP_04050771.1| acetyltransferase, ribosomal protein N-acetylase [Anaerococcus prevotii DSM 20548] # 1 181 1 181 184 223 58 5e-57 MSRIYLAKIDTEAAFELQKWANFSDPRLIGYNYGNLTDFEIKLWQGTISMPNKKYFAVRR VLDDRFIGFVGLKNINPLFKRAKLGIVFDPNFVSEGYGYEAVLAILRVFFKEMNYRTLNL DVNTFNERALNLYKKCGFKIASYSREVFENQDIEADDKDFEISHGMIYSKIINMKLTKDD YNEL >gi|229269864|gb|GG666047.1| GENE 30 28366 - 29097 785 243 aa, chain + ## HITS:1 COG:no KEGG:Apre_0537 NR:ns ## KEGG: Apre_0537 # Name: not_defined # Def: primosome, DnaD subunit # Organism: A.prevotii # Pathway: not_defined # 1 243 1 245 253 283 64.0 5e-75 MNFEMQELKLDMGTTPFENMFLNTYLQMADGDAIKVYLLIYKEIYNNNTVDEGKIKRQLN FDDQRFLDAVNFWINMGIFREKKNADGKTYIEIVSLRQMYFGESDQTPSNEINFDKAQRK SMMFENIERIIARNLTPADITRIHETLGEYDQDPELVTEAFRQAREAGNVDVKYVMGYLK SWRDTGITSLNDLRMKEERDKLKKVTGVRTYRRKSDPQMPSDGMSITEKARRKRLQRLNK TEN >gi|229269864|gb|GG666047.1| GENE 31 29099 - 30079 840 326 aa, chain + ## HITS:1 COG:CAC3588 KEGG:ns NR:ns ## COG: CAC3588 COG1484 # Protein_GI_number: 15896822 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 4 318 8 320 329 143 31.0 5e-34 MKANEKASLILAERRRMNKVLQEERKEEIYKKIPQVKAIDELIKQTGFDSLKLAASKINT EPYEEKIKKLREEKNKLLILNGYKTDYMDLKYHHDLCKDTGFVGTKPCSCRLKLIIEDNY EKSGLRAAINRENFSTFNYDLFSKNPYMNYQVSPYRNIVDIVNDIKHFIDNFDKQTGNIY IWGDVGRGKTFLINSIAKDLLDRNYSVVYMTSTKLFKFLNDYYWAFEDRRENLENQYEII FDCDLLIIDDLGAETHRSTDQSNLFDVVNERMNKGLPIILSSNLEEAMIGEIYGSRVFSR ILGNNSKTYEIFGEDLRLKGTDYDFS >gi|229269864|gb|GG666047.1| GENE 32 30066 - 30737 206 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126666946|ref|ZP_01737922.1| Ribosomal protein S15 [Marinobacter sp. ELB17] # 9 212 7 213 503 84 30 6e-15 MILVDRDQMRAIDRYAINTLKIPSICLVERASLAVLKHINLNKFGYFAVVAGVGNNGADG LALARNLLARYKDVEIYIVGDVAMASEEFKINLASCETLCEEIFYVESIEDLENMEKRLA NVNLIVDALFGTGLNRTVTGIYATVISILNNVMKYKVSIDLPSGLDASTGMDLGEVVDAD LIVTLQLMKAGIYEREAYKKKCVIEDIGIPQKAIDSVLYGLVN >gi|229269864|gb|GG666047.1| GENE 33 30818 - 31699 872 293 aa, chain + ## HITS:1 COG:no KEGG:Mahau_1176 NR:ns ## KEGG: Mahau_1176 # Name: not_defined # Def: hypothetical protein # Organism: M.australiensis # Pathway: not_defined # 19 274 158 407 424 78 23.0 4e-13 MKKKILLIVLSLFVLTSCGVGSYSIKEEANKALDYASEHDQAREEMTKDEAGPSEASENL SENPDDYIEKFVYIDLETMKYDEDLKTIKNSVNTLKGLIENEATFFSSSDRSNDLKTTEF TIKIPRDRSEKFDQVLAGIGKTMDINKNSNNLQTAFRDVDKDLEIKQKQLKKFNELLDKT TNIDDTLVINAKIIETQGEIDAIKKAKADLKTRVTYDTYNITLKEVFSFDQRANNPDLGT RIKLAMGESLAIFKGFFSQLIVGFFLYLPFIIIILLVVFIIYGQKKKIKKPRD >gi|229269864|gb|GG666047.1| GENE 34 32953 - 34869 1514 638 aa, chain - ## HITS:1 COG:FN2029 KEGG:ns NR:ns ## COG: FN2029 COG1835 # Protein_GI_number: 19705320 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Fusobacterium nucleatum # 5 630 1 600 604 184 27.0 3e-46 MERNVKKLTKRKVSFRYLNILRGLCLLAVSTYHLFGHALPGGFLAVIGFLVMSGFLMEKA NFNRDLTPIDIFESLKRKVKKILPPIVFIMFVSLVIALIFAREIFDDSAKSSLAVVFGFE NIRQIIAGASYFDRNGNFNIFVHLWYIALYLQFIGIFYIVKYLGGMVKSISLKIWMIFIL AIASVAISFYLALTDSPIIRIYYGTDTRIYAFFFGMAFYLLYLKYRDRIELNQNHLRIAI GILGLCIFLPMFFINGENIWIYRSFFLVYTLSFALLVAVLYKYEIEYGAGFSRTIFGGIL EYLGRRSFYLYILQYVVQVFFAYFLINLLENKFLFYGLQVIWIIFMGEVCHILFDRKRIN KYLIIVPLVGLAILNAISLAIGNQKEKDMAELKARFAQSEEEIKKNNESFKTHNKDEEEK EKLDKDKKDSPSDDDEEKDKEEKDKDEDKKDEVKKSSKNFKEKAYDDFDFTENELFYVRD LHITAVGDSVLINIDKYLRAYVPNLYLDGKVGRDMPAGPEILQNIKNNVGLGDIILISLG SNGSANHKDMQAIMDIADGRDVYFVNTSHLQSYMDKVNKDMKDFVDDNPKAHLINWREYV KDRPELLAVDRTHPNVEGSQAYADLVIRKILNVNKVGE >gi|229269864|gb|GG666047.1| GENE 35 35231 - 36520 1575 429 aa, chain + ## HITS:1 COG:PH0710 KEGG:ns NR:ns ## COG: PH0710 COG0172 # Protein_GI_number: 14590588 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Pyrococcus horikoshii # 1 429 6 453 460 306 39.0 6e-83 MIDIKLLRENPDFVKENIKKKFQDEKLVLVDEVLELDEKLRSYKTEGDRLRSERNKTSKE IGALMGQGKKEEAEKVKAHVVEINDELVHIEEETARLNEEVKKRMQVIPQIIDETVPLGK DDTENVEIERFGEPVVPDFEVPYHIDIMESFDGIDLDSSRNTSGAGFYYLKGDIARLHSA ILSYARDFMIDRGYTYFVPPFMIRSEVVTGVMSFAEMQDMMYKIEGEDLYLIGTSEHSMI GKFINTINEEEKMPLKMTSYSPCFRKEVGAHGIEERGVYRIHQFEKQEMVIICKPEDSKK LYNELWQNTVEFFRSLEIPVRTLECCSGDLADLKVKSCDVEAWSPRQEKYFEVGSCSNLG DAQARRLGIRLRGEDGNYFAHTLNNTVVAPPRMLIAFLENLLQADGSVKIPAPLQMYMGG KDKIVPTAK >gi|229269864|gb|GG666047.1| GENE 36 36600 - 37364 624 254 aa, chain + ## HITS:1 COG:no KEGG:Apre_1115 NR:ns ## KEGG: Apre_1115 # Name: not_defined # Def: purine or other phosphorylase family 1 # Organism: A.prevotii # Pathway: not_defined # 2 254 3 255 258 353 64.0 5e-96 MIHKNDLAILEFDDSYESVIMPTHEWLDIKLPKKCVFGFLEDHIDQYARENKAKKIAEFE SATKTYPVYLTKHRGQEICLVQAPVGSAPAAQLMDWLIGYGVREIISTGTCGCLIDMPES TFLLPTRAVRQEGTSFHYVKPSRYIGINPIAISAIEDLFKERRLKYREVMTWTTDGFYRE TKDLVKYRVEEGCSVVEMECSALAAVAEMRKVIWGEILFTADTLADIENYDQRNWARDTF AYALELAMDAVCKI >gi|229269864|gb|GG666047.1| GENE 37 37428 - 37967 729 179 aa, chain - ## HITS:1 COG:NMB1796 KEGG:ns NR:ns ## COG: NMB1796 COG0431 # Protein_GI_number: 15677635 # Func_class: R General function prediction only # Function: Predicted flavoprotein # Organism: Neisseria meningitidis MC58 # 2 171 6 182 190 128 38.0 7e-30 MKIGILVGSLRKNSWNKKLAKEVASLIKEETYFIDLADMPFYNQDLDLGEVHPAYTRLRE DVKACDAFIFVTPEYNRSLAPVLKNAIDIASRGPEGNLWKGKPAAVFSSTIGSMGGVSSN LALKQSFTCVGLIAMAQPEVYLSKINELIDKDGRLVTDTRDFVQTACDSFVDFAGKIIG >gi|229269864|gb|GG666047.1| GENE 38 38101 - 39495 1812 464 aa, chain - ## HITS:1 COG:TM1640 KEGG:ns NR:ns ## COG: TM1640 COG0493 # Protein_GI_number: 15644388 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Thermotoga maritima # 6 458 1 459 468 498 57.0 1e-141 MAKFNMSQEKVKMPEQDPKVRNKNFEEVATGYTLEMAMEEAKRCVHCKNQPCVSGCPVSV KIPEFIQFIVDGDLDAAYEKIAETNNLPAICGRVCPQENQCEGVCTRGRKGEPVGIGRLE RFVADYHNNKKYKKPVEVYANREKVAVVGAGPSGLTCAADLAKLGYKVTLFDAFHTAGGV LMYGIPEFRLPKKLVNTELKNVIGLGVKLKTNTIVGRTLSIEDLYDQGYEAIYIASGAGL PKFLGIAGENLNGVYSANEFLTRMNLMKAYKFPEYDTPVHVGKKVCVVGGGNVAMDAARS AKRLGADVTVVYRRSFEEMPARAEESHHAIEEGVNFMNLHNPVEIIGENGWVKAVKVEKM ELGEPDASGRRRPVATGTYEEVEFDSVIVSIGQSPNPLIKHTNPDIKTESWGGIIIDDTT MTSKDGVFAGGDAVSGAATVILAMGAGKKAAANIDKYIRNKNDK >gi|229269864|gb|GG666047.1| GENE 39 39482 - 40324 1031 280 aa, chain - ## HITS:1 COG:MA3786 KEGG:ns NR:ns ## COG: MA3786 COG0543 # Protein_GI_number: 20092582 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Methanosarcina acetivorans str.C2A # 3 278 22 297 299 248 49.0 1e-65 MARIIEKTNLNDSTIKFVVEAKDIAKKALPGQFIILRLDEKGERVPFTISGTDGENVTII VQIVGGTTMRMNGLKAGDGFLDFVGPLGKPTELDDLKGKNVCVIGGGLGTAIAYPQAKYL HQIGANVDVIMGFKNKDIIILEDELKACSDNLYITTDDGSYGRQGFVTQVLEDLINEGKS YDHVLTIGPAIMMKNVVNITKPKNIPTTVSMNSIMVDGTGMCGCCRLTVGGEMKFACVDG PDFDGFLIDFDEAMNRSRNYATEEREHICNLTGEVRNGKI >gi|229269864|gb|GG666047.1| GENE 40 40466 - 42241 258 591 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 330 575 114 355 398 103 28 5e-21 MEKNKRKYTNNYLFRRFLPYYGPYKKVLTIDLLAAAFTTISELILPLLLSYLTDWAQIGI LDAPRILKVAVIYVITKAVSVVARYFMQSMGHIMGAMIERDMRKDVFNHLMEMDTEFFNE SKVGQLMTRLTSDLFEITEFAHHVPEEFLVGVIKLFVSFVVLLTINWKLSLVIYILIPLM YVVSRQSRAKFRRATKNSKKQIGEINAGVEDTLLGISVVKSFANEAIEKSKFAKENDKFA DIKADQYYNMAKYFMVKDTFSGIMYLALIVIGGFLVIQKEITPGDLIAFTMYLNMLVATI ERLINFTDTYERGTTGIERFIEIMSLDRDIFDKENPETLTNVKGKIEFDKVSFKYPNTPV GEAYVLKDMSFKINVGENIALVGPSGAGKTTISKLIPRFYDVNEGEIRIDNTNIKDLSIE SLRNNIGIVQQDVYLFSGTVRANIAYGKEDATEEEIKEAARLAGADEFIKDLPDGLDTYI GERGVKLSGGQKQRISIARVFLKNPPILILDEATSALDNKSEAIVQASLEKLSIGRTTLT IAHRLSTIINADEIIVLTYDGIVERGNHKDLLAKKGVYYNLYNSNNTDLFG >gi|229269864|gb|GG666047.1| GENE 41 42323 - 43114 808 263 aa, chain + ## HITS:1 COG:sll0897 KEGG:ns NR:ns ## COG: sll0897 COG0484 # Protein_GI_number: 16332061 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Synechocystis # 204 257 9 62 377 79 64.0 9e-15 MKKLLGKALHGLASLIGTIFTVLINFMNILVMTFEGIRSLLALVFMVGCSTFIFLPTLLL FLPSKVWYAIFIILVIPVLGPKFISILRYGNYVLTEWMYDRANYLITGQRVGFENISDYS EKYKVDQERERQRQAEEEARARQEQMYNYFEDLFGNFTYYDARDFNQGNFGGFDGTYNNG NFGGFSGVNDLGFKERYERATGKLGVPVNTDIYEVKLAYRKLAKKYHPDLNKEPGAKEKF QEINDAYEFLSEENIKKYKNTYL >gi|229269864|gb|GG666047.1| GENE 42 43123 - 43905 928 260 aa, chain + ## HITS:1 COG:CAC2265 KEGG:ns NR:ns ## COG: CAC2265 COG2966 # Protein_GI_number: 15895533 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 17 259 9 248 257 113 31.0 5e-25 MHDVILDEKSAVLLSEVASNAGALMLENGAEIYRVEDTIERIIRSKTNAKDVDVYSTFNV IILSFTYENEVHSNVRRVKSRSNKLFYVDKVNQFSRDFCAGKLSLEEALIELEEIKQSKG RPLFERFFGGAIAAGAFSLLLSGGQNEMAISIIVGMLSYYASYVMEQNGLGYFVVNYLYG VIVSILTMIFARFYPDIKSGVIIVSSMMALLPGITITNAMRDLMSGDATSGLTGAVIGIL ISTALAMGVGTPITIMKIWG >gi|229269864|gb|GG666047.1| GENE 43 43907 - 44383 385 158 aa, chain + ## HITS:1 COG:lin0586 KEGG:ns NR:ns ## COG: lin0586 COG3610 # Protein_GI_number: 16799661 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 4 147 8 151 152 81 31.0 7e-16 MFYIKEFIISTIAAVGFGLIFDLPKKALYISSLAAGFGWVIYKVVFANTNSVYLGSLISA LVMTATAEILARIYHHPASVFILPGIINLCPGEAIYKSMTNFIANNTYIAIGFLYKALGI AAAIAFGVLLASSFSSSLKTFKERNHRRTDFTKFGRKK >gi|229269864|gb|GG666047.1| GENE 44 44746 - 44973 290 75 aa, chain + ## HITS:1 COG:SP1359_1 KEGG:ns NR:ns ## COG: SP1359_1 COG0225 # Protein_GI_number: 15901213 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Streptococcus pneumoniae TIGR4 # 2 70 88 156 163 86 59.0 1e-17 MGRQYRTGIYSENENDLEVAKNFLRKKQEASDRKILVEVEQLKSYVVAEAYHQDYLKKNP AGYCHIDLTDVLEIK >gi|229269864|gb|GG666047.1| GENE 45 44970 - 46028 997 352 aa, chain + ## HITS:1 COG:SP0987 KEGG:ns NR:ns ## COG: SP0987 COG3757 # Protein_GI_number: 15900862 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lyzozyme M1 (1,4-beta-N-acetylmuramidase) # Organism: Streptococcus pneumoniae TIGR4 # 92 292 54 249 266 70 28.0 4e-12 MKKISKIIVLGVALMIGTPCLAHADEIVKYDPTNLDQILVKNGIKVDESKVKARRDELVK KNPDLKPDLKVVEEVKENKPVVYPKTAVYSNVVDISEHQKPSSINYDKFAADIDGAILRS SITTFKEDEETKEKSYYLRRDFTVDTHYNNLNNRNVPIGFYHYSRATNEEEATKEANFVL DYIRGKNVSLPIYIDIEDNLRQSKVSRESLSKAAETFINIMERNGYVSGVYSYPYFAKKH LTKEIRNRGNFWIADYAGIGFTGYTDTDFDIWQYAHKGRVNGYAGNIDKNALYKDYPLII KGKSRKDYNKLIQEIIDGHWSTGKEREKRLKYAGYDYNKIQKDVTRRMNLKK >gi|229269864|gb|GG666047.1| GENE 46 46045 - 46266 398 73 aa, chain + ## HITS:1 COG:CAC0545 KEGG:ns NR:ns ## COG: CAC0545 COG4443 # Protein_GI_number: 15893835 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 2 67 4 69 74 77 59.0 5e-15 MAIKYDIVENLGILSTNAKGWTKELNLVSWNDREAKYDIRDWNEDHTRMSKGITLTTEEA EVLKNILADEFDK >gi|229269864|gb|GG666047.1| GENE 47 46308 - 46721 425 137 aa, chain + ## HITS:1 COG:BMEI0697 KEGG:ns NR:ns ## COG: BMEI0697 COG2510 # Protein_GI_number: 17986980 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Brucella melitensis # 5 137 9 141 143 94 47.0 4e-20 MAYIYALISAIFAALTSILAKIGISDINSNLATAIRTTVVLVFSWLMVFVVGGQHDLGAI SKKSLVFIILSGLSTGISWLAFYKALQMTDASKIVAIDKLSVVFTIIFAFLILGEAASKK AILGTILIGLGTLIMVI >gi|229269864|gb|GG666047.1| GENE 48 46779 - 47474 540 231 aa, chain + ## HITS:1 COG:no KEGG:Apre_1390 NR:ns ## KEGG: Apre_1390 # Name: not_defined # Def: aldose 1-epimerase # Organism: A.prevotii # Pathway: not_defined # 1 230 1 233 235 150 38.0 5e-35 MKIELSKNKAKLIANTNGAYIEEYAYDGKDIIFPKFETEIAGKKKIRGGSHPCLPSFGPS EINDLKDHGYGRDCDWEVVEKSANKVVLKLEGLCGYEGMDSFITYELGDEWLLAEIKMIN NANKDLPVAPGFHPYFRAGQSFKVDGVDFGSFKLEDTYFLDASEVSFKAENFNIEIKNEN FHKFAIWTDFLDDYRCVEPCYNGKSFVKDGKPYILKAGETFLAKMKIKIEA >gi|229269864|gb|GG666047.1| GENE 49 47563 - 48222 727 219 aa, chain + ## HITS:1 COG:AGc4416 KEGG:ns NR:ns ## COG: AGc4416 COG0745 # Protein_GI_number: 15889704 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 214 1 219 234 115 35.0 5e-26 MNICIIEDNLTLVESLKDLLESEGYEVDYFLDLREIDDYLTLNKYDLIILDLMLGDFDGL DFLKTIRNEIKRPIVILTAKNGKEDELRGLRLGADDYIKKPFDPDILLARIKSKLRLNEN IEISYKDTTFDFETGFVKKNESKAYFTNQEKKILNILYINKGKVLSKESLLSMVSEKFDS ISEKTIVTHIYNIRKKILEIGAADPIENIWKEGYKWKNE >gi|229269864|gb|GG666047.1| GENE 50 48207 - 49223 906 338 aa, chain + ## HITS:1 COG:CAC0863 KEGG:ns NR:ns ## COG: CAC0863 COG0642 # Protein_GI_number: 15894150 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 80 315 34 280 300 70 24.0 3e-12 MEKRVKNLVFGILLDNFLRILVYGILTIIALKLGQAYLYPLRLKRDFAMGVFMIYTLYFL RKSYIGIDRNILRDLRNLEDYIRKDNYDKDLELAEFDLIAKTLKDKNQKLREKDSFIKTS LAAISHDMKTPLTVINTNLSLIKVTEPKNQERISKIKGESETISSYIDDLMEVAGGFIDE IQLEKISFSVFMENLKAHLSLFEDMKEEKINILNKINSKDDFYINIDKNRFDKALNQLLT NAFEHKKRSVWLEVMAKNEKIIITVADDGAGFDEKSLRDGKKLFYTDNYGRTSGKGTGMG LFIADSYISAMGGDLILANENGGRAKICLDIGEDKHGK >gi|229269864|gb|GG666047.1| GENE 51 49213 - 49458 265 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486629|ref|ZP_03916945.1| ## NR: gi|227486629|ref|ZP_03916945.1| hypothetical protein HMPREF0072_2032 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2032 [Anaerococcus lactolyticus ATCC 51172] # 1 81 1 81 81 112 100.0 1e-23 MENKLFLITLIIFASFDFYKLIKKDLGFYSFFRPLSLAISYKFILDGIDQRLYVIVLVYF IFLGTIFTKNMRKEELYEKEI >gi|229269864|gb|GG666047.1| GENE 52 49442 - 49729 294 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486630|ref|ZP_03916946.1| ## NR: gi|227486630|ref|ZP_03916946.1| hypothetical protein HMPREF0072_2033 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2033 [Anaerococcus lactolyticus ATCC 51172] # 1 95 1 95 95 123 100.0 5e-27 MKKKFDFYDFLVFIFGLVGFGAYYLVMTQFFKIDPFKGLAIIPTIYFGISVFTMFFVYDI VNEKIGNNIILTYKTVHLVSYVFGPIIFIYKMINK >gi|229269864|gb|GG666047.1| GENE 53 49805 - 50872 989 355 aa, chain + ## HITS:1 COG:BS_yrvO KEGG:ns NR:ns ## COG: BS_yrvO COG1104 # Protein_GI_number: 16079805 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Bacillus subtilis # 1 325 1 343 346 241 40.0 1e-63 MKKIYFDYAATSIKRKKILEDILSKADLFDGNPDSSHSFGRDAKKILEESRKAIAKSIGA KPSQIIFTSGASESNNTVLSAFKNEKIITTNIEHDSIENTYNPENTILIEASQEGISLDQ IKEKITDEVKLVSVMMVNNEMGLIMPIKEIGDYLKEKDIYFHVDCVQAYGHLDIDVDAMN IDFLSLSGHKIGGINGFGVLFARETLPSFIKGGEQEKYRRAGTSFVMGAYSMAKSFPYMI EEREKIQDLKKYLLDSLAKSKLSYQINANPEETVDHIVNIYFKDYRSDFLLTYLDMHEIA VSAGSACRAGAVIPSKVVERIYGQERASHSLRISLGFENTREDIDKLLEVLGELR >gi|229269864|gb|GG666047.1| GENE 54 50869 - 51972 1233 367 aa, chain + ## HITS:1 COG:lin1547 KEGG:ns NR:ns ## COG: lin1547 COG0482 # Protein_GI_number: 16800615 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain # Organism: Listeria innocua # 2 365 3 367 371 501 65.0 1e-142 MTDKKDIKVIVGISGGVDSSVAALLLKEEGYDVTGIFMKNWDDTDENGFCTAEEDFEDAV AVCNQIGIPYYSINFEKEYYDRVFSYFLDEYKKGRTPNPDIMCNKEIKFKAFLDFAKNLG ADYLATGHYARVDRTDGETKMLRGLDNNKDQTYFLSQLSQEQIKDVLFPVGDLQKSEVRE IAKKAGLATANKKDSTGICFIGERDFNEFLSHYLPAQPGNIVDTEGHIMGKHDGLMYHTI GQRRGLGIGGEGEAWFVYGKDLEKNELLVCQGKNNPLLFSNKLYGSEFSTISDKECPKEF DCTAKFRYRQADIKAHVKVLGDGKVEVTYDKTKAVTPGQAAVFYDGEVCLGSAIIDEVYM DDRKLRV >gi|229269864|gb|GG666047.1| GENE 55 52059 - 52886 1175 275 aa, chain - ## HITS:1 COG:SP1845 KEGG:ns NR:ns ## COG: SP1845 COG0708 # Protein_GI_number: 15901674 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Streptococcus pneumoniae TIGR4 # 1 275 1 275 275 397 70.0 1e-110 MKFISWNIDSLNAALTSDSARAIMSRLVLDTVIKENADVIAIQETKLPYTGLSKKHIAKL AEYFPDYDYVYRSSEDPARKSYAGTMTLYKKGLKVEPTYPQIGAPCTMDFEGRIITLEFD NFYFTHVYTPNAGNGLTRLADRQVWDKLYADYLKSLDQNKPVIAAGDFNVAHEEIDLAHP ENNHESPGFTDEEREGFTNLLAKGFTDTFRHIHGRVEGKYTWWAQRVKTSKINNSGWRID YFLVSERIKDLITNSDMIDSGERQDHTPIVLEINI >gi|229269864|gb|GG666047.1| GENE 56 53095 - 54036 801 313 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0421_21021 NR:ns ## KEGG: HMPREF0421_21021 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 4 313 11 328 330 195 37.0 2e-48 MNKFTDPDTIKRIEEKENSPEFKEKLLAIKTKMKGKKTQVFDFSFLIALVIGILLMHTRY YSLFIICFVLYLKFFKSDNKVDNDISDDYANAFMAPILEEVFPETTVNYNESLEVEDFDK IFIDSHRYESSCHISFADPYKTQLYNLKAFYKYRNSKGNLVDSIGFLGQVLLENFDTKGE GHVRIVPLKYRNEYGPHIEAYYGKIQEGEREILTESIEFNDSYAVFATDELLAKRILDPN IIEILNAWYGRTELCLYVDVKGLMMSFNTGSYMFELPSRKVAIDKLSLSGEYEKVRVNLA YFYGLMALIKGKL >gi|229269864|gb|GG666047.1| GENE 57 54056 - 54616 548 186 aa, chain + ## HITS:1 COG:SP1284 KEGG:ns NR:ns ## COG: SP1284 COG1704 # Protein_GI_number: 15901144 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 13 184 8 181 186 87 30.0 1e-17 MNHLSSFILPVIILWLVFRFYIRTLNKLKRYEVVIEESKKNVDVALAKRYDTISQMINVA KSYARYEKNTLTELAKSRASHSIEDFNTTIKNQDQTIDKIFALAEAYPELRSSDEFLKLQ NEIDDENEQLAAAKRIVNNNISMLNQEVVSFPNSIVASMNGIKELDFLSEDNLENKKSID SFDYEI >gi|229269864|gb|GG666047.1| GENE 58 54794 - 56224 1953 476 aa, chain + ## HITS:1 COG:no KEGG:Apre_0571 NR:ns ## KEGG: Apre_0571 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 94 260 19 186 240 95 42.0 3e-18 MKKSKLLLALAVSAMLINSAYASEMKDQKVNEIEAEDPISNPKVAEYKVKKIYEEGVDIV DVNNEADVYNVPKSYFKGMELKEGKIFTLYTNWDILKSDPAKFGKVYRVIEGKESHVFSD IYVIKKINAEGVDVYKKSNPDDLYNIPKKEFKDIDLVEGKEVEIVADDTVLASYPAQFTK IHKINEVKPKEEKVVRDFVVKEINEEGVTLYEVGNESNLYNVPKSEFKGMKLEKGKVFTI TSDNISLKSYPAQFGKIFSIVEKAIPAKTMVKSYVVEKVTKDIVTVHEKGMKDSKYNIAK KHFGKITPQVGKAYKIETSEEILTSDPAQFAAIYKVELVKETPKKNEKPADKKKPAKKSK ENKKEAEKTIFDIFVVEKIDEEGVTVARKSNKEDKYLVPKKDFGKLEIKEGKEYKIFTDD IVLTSYPAQFGKIYKIEEVMAGKNKNPATNPKTGLIGTSLALVGLIGAGLGYKKIK >gi|229269864|gb|GG666047.1| GENE 59 56303 - 57766 1918 487 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486637|ref|ZP_03916953.1| ## NR: gi|227486637|ref|ZP_03916953.1| hypothetical protein HMPREF0072_2040 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2040 [Anaerococcus lactolyticus ATCC 51172] # 1 487 1 487 487 761 100.0 0 MTGNNFESDLGHIFDLAEKYDFVKEKIDYIFQFFALAYDLSLREFEFLIESLYFERDEIS KNQKLSALFKLGEVKDELLSLSDKGYIKIERADESDDDYYYVYDYTVEASFLYVDFRQRL SAILEKYRSAQDVVPESYLDSKNSLANLLDDLKILADDKHFLELDSNSDISSYSYRFDLL IDLKKSLNKKYSDLKILSFEMAKEYYDDEDFDHALVGLIEEGRHKLEIEYTENGKKIKKA LLVKEDDYEDIIEVEDLDEKIEDGEAFTHFVMLMDDFNRDHKKIKEKLRNLYEFIAPAYD LTLAEFEFCLYYTTIYSTAYDEIYDIDGYFIEDSKKIVTSLIEKGYIYSSEDGFILTEKS DAVFKHMGALFANTMEKNEADYDKLLTCVNNYYDASETLEEFTDNFAYRFSFEDFDVEEQ ISDEIDEYSLGVPFEKAVANLLAKKFTNPKVLSLTDEGDYIEAIFITDDYKGKTLAGYLN KEGINEM >gi|229269864|gb|GG666047.1| GENE 60 57775 - 59082 1184 435 aa, chain + ## HITS:1 COG:no KEGG:Apre_0567 NR:ns ## KEGG: Apre_0567 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 28 267 64 308 309 117 36.0 8e-25 MKKILKIIFALILINLGLVGKALANTDDDMLRNDIHTAIKDTIDGKLIYQVNVRTVYGPS DVNIYMANSDEDKLPAASTIKTMIGLAVLNRVENGKMTYSEEIKRDLDLSLRLSDNDATN RLIEALGGFDPINAFIKSFTKNNRTSLNRLMLGAGNENYTNAKDLAWALYGIYRSNSEIA RDMVRSLSNSSSKRVKLLKNINPSYKSMNKTGELDRIQNDVALVETKSQAYIISVMTEND GYMDTYNQILLINQLGEKIALAFDKYELAYKNRKRLSDEKVIARLNTQEKKLAYAVYSNQ ILINAGKILLNSDLRAVDEMRPALLAKINDSEKTLVKSKKVLAKLSKEPIKNENDMVVNL VRLIYTNKDLDSKVDKDLAIAFYKNQSAVKAGEMLLNEAPKTSLSIRRPLLKNIKKSEKT FEKMNKFFDKLNEKS >gi|229269864|gb|GG666047.1| GENE 61 59103 - 59996 843 297 aa, chain + ## HITS:1 COG:FN1372 KEGG:ns NR:ns ## COG: FN1372 COG0564 # Protein_GI_number: 19704707 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Fusobacterium nucleatum # 9 288 24 304 319 217 45.0 3e-56 MILIADDLIRVDKYISDELDSIPREKIKDFIKASLIKVNDKKIKPSFKLQMGDEIFIDDS LFEVQEIKAEDIPLDIVYENNDYAIINKQKNLIVHPAGAIVTGTLVNALLYKYGYDGLSH IGGDDRPGIVHRLDKDTTGLMVIAKNNESYRYLKTLFETRQVRKEYLAIVFGNFDEKCGR IENFMDRDPHNRRKMAVRPSGRRAISEYEVLSETDGFSLVKVHIITGRTHQIRVHMTSIN HPLLGDPVYGNFKHKFNLDHPLLHCAHLSFEDKDGNEMVFDKEVPEEFEKYKNILGL >gi|229269864|gb|GG666047.1| GENE 62 60280 - 63009 3884 909 aa, chain + ## HITS:1 COG:FN1718 KEGG:ns NR:ns ## COG: FN1718 COG0653 # Protein_GI_number: 19705039 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Fusobacterium nucleatum # 3 857 6 837 869 780 52.0 0 MALFNIFKSFSQKEIEQNQKTVDKILALDEEMQKLTDEQLQHKTIEFKERLANGETLDDL LVEAFAVVREASYRVLGIKHYPVQLLGGIVLHNGQIAEMKTGEGKTLVATLPSYLNALSG KGVHVVTVNDYLAKRDQEWMGKVHTWLGLSVGCIIYGLTNSERRENYNADITYGTNNQFG FDYLRDNMVIYKEDMVQRGLNYAIVDEVDSILIDEARTPLIISGQGDESTDTYQKANEFI QTLEGRILDPNEDADIDPFDREFKVEDVDFLVDEKRKSSNLTEKGTKKAEEFFGIENLSD TENLELSHYINNALKANTTMTRDIDYVVNHGEVEIVDEFTGRIMQGRRFSDGLHQAIEAK EGVEVKAESKTLATITFQNYFRMYAKLSGMTGTAKTEEDEFDEIYKLDVVEIPTNRPVQR IDDNDHVYINERGKFNAIINEINEVHATGQPILVGTISIEASERLSAALKQAGISHTVLN AKNHEREAEIVAQAGRLGAVTIATNMAGRGTDITLGGNVDFMAKQKLRREGTSEELIEEV DSFSATDNQEIIDIRKKFRHYKDQFRPAIKEEEAKVIAAGGLYIIGSERHESRRIDNQLR GRSGRQGDPGKSRFFISLEDDLIRLNGGEAVAKFVQKADFDENEPIVSRMVTRSIEKAQT RVEANNFATRKRVLQYDDVMNKQRTIIYNERREVLMGQDMKETIIDMIKQVIKDAVYTFT NPEVKPENWEMTALLNYLNGLGVPVTQLHFENINSYTQDDLIEYVTGATLAKYEDKEASF GPDNMREVERVILLRVIDQKWMDHIDAMDQMRKEIGVRAMGQEDPVRAYTNEGFDMYEEM TRAILEDTVRYMMNVEIRQNIQRKQVLIPEDASHEDVTGPSTDEEDYEGLNRAERRRMDR EAKKSTVKK >gi|229269864|gb|GG666047.1| GENE 63 63135 - 64124 1066 329 aa, chain + ## HITS:1 COG:aq_1840 KEGG:ns NR:ns ## COG: aq_1840 COG1186 # Protein_GI_number: 15606882 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Aquifex aeolicus # 3 329 43 366 373 350 55.0 3e-96 MSPNFWDNSDKAQTVMADLSDKKEDLKAYTDIEDAIKDNKDLIDLVELSDEDESKTLEEV DSNLKQIKKSLASLKLKTQLNGEYDKNNAYLSINAGAGGLEATDWADMLFRMYTRYCEKR GFKVEVKDLNNEEAGGIKSVTLHVKGPYAYGYLKGEKGVHRLVRISPFDSQSRRHTSFSS VDVFPELDEDTSIEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGVVATSQAERS QMQNRETAMNLLISKLIQIKEEEKKEKIEDIQGSYSQIAWGSQIRSYVFQPYTMVKDHRT NYEMGNVEAVMDGDIQGFIDAYLAQNQNK >gi|229269864|gb|GG666047.1| GENE 64 64167 - 65252 1244 361 aa, chain + ## HITS:1 COG:SPy2207 KEGG:ns NR:ns ## COG: SPy2207 COG0180 # Protein_GI_number: 15675940 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Streptococcus pyogenes M1 GAS # 4 346 5 340 340 416 60.0 1e-116 MGDIILTGDRPTGRLHLGHYVGSLRNRVKMQNEGKYDKMYVMIADSQALTDNFDNPQKIR ENLIEVALDYLSVGIDPSKVSIFIQSQVAELTELTFYFLNLVTLSRLERNPTVKSEIKLR NFETSLSAGFLIYPVSQAADILLFDANVVPVGEDQEPMLEQARELARSFNNIYGEVFVEP KAVLPESKMARRMPGIDGAAKMSKSLGNAIYLADDKNTVKKKVMSMYTDPDHINIDDPGK VEGNIVFTYLDVFSNDSHFEKYLPEYKNLDELKAHYQRGGLGDVKCKKFLIKVLEEELEP IRARRAEYEKDIEGVFDILRKGTADARSQGAKKLEKVKAAMGINYFEDSDLIKDLQNKYK D >gi|229269864|gb|GG666047.1| GENE 65 65255 - 66553 1069 432 aa, chain + ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 5 432 7 435 438 286 37.0 7e-77 MKLPKTKSKTIFILSATGSAVGMANVWGFPYKFHKGGIFFLIFYLIFISLFSYVGLSSEF AIGRMIKGSVVKSYKKAIETRHPESKIAKIYGYFPLLISLIMAVGYTIIVSYVAKALVDT INGKLIITPSFTWFEEFSSRSFAVMEVHLLIIVLVILISLGGFKSVQWLNSVLMPSMIVI YLIVLFKMLTLPNIEEGYKLLFRFDFKDCNIGTAISAMGDALFALSITGFGMVFVGRMLT DDHDIVTNSKLTGLFDTIVALLSAFIIVPSIVVFSMHEAGGPALIFQILPSIFNSMRIGR GFAVLFYMAIIMAGLTSLQTIFESIAHTLNQEFKMNDKTALLLVGTTVLILGVDLHPLAK WTSLMDITIYYLIPLGAVLGAVVWFFVMDSEVLLDEINKGAKHKKTQTFIKIGRYIYTPL VILVSLAAILFH >gi|229269864|gb|GG666047.1| GENE 66 66732 - 68036 1092 434 aa, chain + ## HITS:1 COG:FN1989 KEGG:ns NR:ns ## COG: FN1989 COG0733 # Protein_GI_number: 19705285 # Func_class: R General function prediction only # Function: Na+-dependent transporters of the SNF family # Organism: Fusobacterium nucleatum # 3 414 7 418 438 370 49.0 1e-102 MNKFSSKLGFILTAVGSAVGMANVWGFPYKFQKGGIVFLIAYIFFVSVFAYCGLASEFAV GRYAHTGTLGAYQKAFKSRKEDTIIGKFIGYIPLIGSLLIAIGYAVIVAYVLKALVDSLT GSLLTVDTTSYFDSFSLKPFSVVPYHFFIIAITLLSCIGGASTIEKSNKIMMPAFFVLFV VLAIRILTLPNAFEGYKYMFRFDKEMINWGTILQAMGQAFFSLSVTGSGMLVVGAYLSDD EDIVSSSKMTGFLDTVAAMLASFVMIPAIIVYNMDQAGGPGLLFQVLPTILQDMGFGRVF AIILYVAVVFGGISSLQNMFEVVAESLMQRHPKLKRNLVLFLIGLVVFAIGVNMEMISQW GPFMDFISIYVIPIGAMIGAVTWFWILTKDQLLGAINLGAKKQYGNTWYNIGKFLYVPLA VILCLIAVIFRISF >gi|229269864|gb|GG666047.1| GENE 67 68117 - 68797 993 226 aa, chain - ## HITS:1 COG:alr2268 KEGG:ns NR:ns ## COG: alr2268 COG0152 # Protein_GI_number: 17229760 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Nostoc sp. PCC 7120 # 4 213 7 206 245 99 32.0 4e-21 MDLIYKGKTKNIYSLDNGNILMKFKDDVTGKDGVFDPGENQVGLSIDGAGKAGLRMTEFF FNKLNEKNVPTHYVAANIDENTMEVRKAKVFGKGLEFICRYRAVGSFYKRYGKYIEEGAP LDGFFEVTIKDDAAGDPTISKDCLAALNIATADQYEELKRLTKEICGLIRDILKEKGLDL YDIKLEFGVDENDKIILIDEISGGNMRVYKDNEYIEPLRLSELVLK >gi|229269864|gb|GG666047.1| GENE 68 68978 - 69457 610 159 aa, chain + ## HITS:1 COG:SSO1064 KEGG:ns NR:ns ## COG: SSO1064 COG0041 # Protein_GI_number: 15897932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Sulfolobus solfataricus # 1 153 1 151 158 181 63.0 4e-46 MSKIAVIMGSKSDYKTMKECCSVLDKFGIDYDKRVISAHRTPELMVDFAKNARKNGYSLI IAAAGGAAHLPGMVAASTTLPVIGVPIKSSTLNGVDSLLSIVQMPYGVPVATMAIGEAGA KNAAITALAILAINDEKLAEKYRDFKIELENIVKEDMKI >gi|229269864|gb|GG666047.1| GENE 69 69454 - 70494 1121 346 aa, chain + ## HITS:1 COG:BH0624 KEGG:ns NR:ns ## COG: BH0624 COG0026 # Protein_GI_number: 15613187 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Bacillus halodurans # 21 338 20 357 379 211 37.0 1e-54 MIKTILPKSTIGIIGGGQLGRMLAMSAKEMGYKIAILDPSEDACARKFADYFIHSAFNVY ENIEKLCQMSDVITFEFENIDIDSYKKLESKYNFVQSSSILEISQHRLKEKEYARSLGIP TVKYFDANKGDYEIDGKFVMKTTRFGYDGKGQKIISSNEEVEKDTILEELIDLDKEISVV AVKDIDGIEIVAVVENEHRHNILYRSNIPAHITKYQESKAIEYTKKILADNDYYGVLTVE YFISNGDVIFNEIAPRVHNSGHITQESATKSQFRAHIEGICGLKVGKIENREATLYNILG QNEEYFINLITKKQGYLHLYEKEARHNRKIGHMNFLGNVYLEDDFE >gi|229269864|gb|GG666047.1| GENE 70 70481 - 74149 4103 1222 aa, chain + ## HITS:1 COG:SP0045_1 KEGG:ns NR:ns ## COG: SP0045_1 COG0046 # Protein_GI_number: 15899990 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Streptococcus pneumoniae TIGR4 # 3 934 1 948 948 791 45.0 0 MTLNKRIFVQKRPAYDRESENLKKLFNRDFNLALEKVDTYVIYDIYNISEDLYAKAKTRV FAEMMTDQVFEDLDLDGKTYIAYETLPAQYDQRSDSAMQALKLIDDKVDVLVRAGKLVVL DGEVSEQELGKIKKYLINPIESREKDLGKMDFAIDSQMKPLRDLTGFRNYGKEELEGLIK DLSLALDLEDLEFIQDHYKKENRDPSETEIYVLDVFWSDHCRHTTFETSLDEVKINSKLF QKEIQDAFDYYLKLREELGITKPIRLMDMASIFGKYHTKVLGDTNIEVSEEINACSFFTE IENKGKKERWLIQFKNETHNHPSEIEPFGGASTCIGGAIRDPLSGRSYVYQAMRVSGAGN ILEKREDTMANKLPQVEISKGKALGNSSYGNQIGLATTFVREIYDPSYVAKTMEVGAVVG AVKDGDYKREELLPGDIVIMIGGRTGRDGIQGASGSSVIHNDSSLTTASSQVQKGNPVEE RKIQRLFRKPEVTRLIKKSNDFGAGGVSVAIGELSEGIEIFLDRVKTKYKGLNPTEIAIS ESQERMAVGIDKKDYEAFVKECEKENLEYVHVANITDKKRLEMYYNDEKIVDFSAEFLAT AGVRKHAKADLVDKVRENPFVKKEVSKQAILDELKDLNVTNQKGMVSMFDSTVGAQTVMM PFAGKERITPVQASVAAIPTLYSTPDTATIMAYGFIPKISKYSPFLSSIYAVLESVAKVY AAGGNKESLYFSFQEYFEKLLDDPEKWGKVTQAMLGSIIAQREIGRPSIGGKDSMSGSFN DLNVVETLISFACTPVKIEDVITPDLKKVGNKLYIIEIEKDEKAYPNIKKAMADFEKLNS YIKDKKVVAAYVQDFGSVTSSLIKMALGNKLGFTIDYDATLDFNPCSIVIEANTDLDFKE IGKVSEEISVNGIKINIDEAEKAYMSTLEEIYPTYYNKNQGKVENLVSEKTENIYYKEKV DEVKVVIPVFPGTNSEYDTQKAFEEAGARVTQVVFTNTKSDDIEKSIDAFVEEIKTSHII AFPGGFSAGDEPDGSAKFIVNILKNDKIKEAIHAHLADKKLILGICNGFQALIKSGLLPY GKICNLDEDDLSLFRNVGYRHISDTAITRVASTKSPWTQGFEIGDLHELVFSHGEGRLVG NKIEKFKHLAAFQYVDADGDASLNGKYNPNGSALAIEGMVSEDGLILGKMGHSERSYKTL YKTNTLKDRQDIFKNGVEYFTR >gi|229269864|gb|GG666047.1| GENE 71 74170 - 75585 1581 471 aa, chain + ## HITS:1 COG:SA0922 KEGG:ns NR:ns ## COG: SA0922 COG0034 # Protein_GI_number: 15926656 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Staphylococcus aureus N315 # 1 468 13 481 494 539 55.0 1e-153 MFGIWNIEKAPSVAFYALHALQHRGQQGAGIVSTERTRLRGYRNIGLLADVFKDNGKLEK IDGSAALGALWYSSGNSTNVQNIEPLLYKFNDGHLGIAMNGNLNNAKWLRAELEDEGAVF HSASHAEIIMHLIRRSRKETIEERFKEALNKLRGSFSVMLLTQDALYGAVDRHATRPLVL GKLNDSYAIASESCALNVIGADFLKDISAGEFIKIDDKGYEIGSFTPGSNIAIESMEFIY FARPDSTILGKNVHIVRKNTGRVLAREYPVEADIVVGVPNSSLSLASGYAEEIGLPYEMG LIKNQYIGRTFIEPSQHLRDIAVKMKLSALSDVVRNKRVILLDDSIVRGTTSKRIISMLK RAGASEVHLRIGSPEIIFPSYSGIDMKTSEELIAANLTKDEVRDLIGADSLEFITVEGLK EAIGFDFDSPNNGISLDIFTGEYYEGLGDYEEEFKKELTDIQKQYLAKGNK >gi|229269864|gb|GG666047.1| GENE 72 75582 - 76586 761 334 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|126667548|ref|ZP_01738518.1| Ribosomal protein S7 [Marinobacter sp. ELB17] # 5 317 10 321 354 297 46 3e-79 MSEKYKAAGVSLNAGYESVERIKKHVESTKNKGMMDMIGSFGGAFDLSAYGFKNPVLVSG TDGVGTKLKLAFDMDKHDTIGIDAVAMCVNDILAQGALPLFFLDYIACGKNDPAQIEAIV KGVADGCREAQAALVGGETAEMPGFYKEGEYDIAGFAVGAAEKEDLINPENTKPGQAVIG IPSTGFHSNGFSLIRKVLKDENISLDDDFNGETIGEALLRPTKIYAKEVKTLLENVKVAG ISHITGGGFIENLPRALKKGLGMKIYRDSYEVPAIFKFIEEKGKIDHDEMYQVFNMGVGL AVIVDDADKQKVLDLIDDAFVLGEVTDKEGIVLL >gi|229269864|gb|GG666047.1| GENE 73 76583 - 77146 672 187 aa, chain + ## HITS:1 COG:BS_purN KEGG:ns NR:ns ## COG: BS_purN COG0299 # Protein_GI_number: 16077719 # Func_class: F Nucleotide transport and metabolism # Function: Folate-dependent phosphoribosylglycinamide formyltransferase PurN # Organism: Bacillus subtilis # 1 187 1 194 195 166 42.0 3e-41 MKKIGIFASGTGTNFEALASSDQIKSLANIKIMVCDKTGAKVIKRAEDKNIKTFVFNPKD YANKLAYEKEILEKVKDLDYIFLAGYMRILSKDFLEKYKGKVVNIHPSLLPKYKGIESIK RAYEAGEEYIGVTIHYVNEEIDGGEILAQDKFKVDYNKSLDEVEGQVHDLEHRLYIKTAA EILKGEK >gi|229269864|gb|GG666047.1| GENE 74 77143 - 78660 1935 505 aa, chain + ## HITS:1 COG:BS_purH KEGG:ns NR:ns ## COG: BS_purH COG0138 # Protein_GI_number: 16077720 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Bacillus subtilis # 1 505 3 512 512 540 55.0 1e-153 MKRALISVSDKAGVADFAKGLVANGFEIISTGGTLNHLREAGVDCISIEDYTGFPEILEG RVKTLHPKVHGGLLSKRDNESHVSELKANEIGYIDLICVNLYPFAETLAKEGVSHEEIIE NIDIGGPSMLRSAAKNYKFVTVVTDKNDYEIIFKELEEKGETCLETRQRLAGKVFNKTAQ YDCLIASYFNKINGTEETLNLTFRLEDELRYGENPHQKAAFYVSDEEVSYALQDCVQLHG KKMSYNNIQDASAALDILQEFDETVCVGLKHMNPCGVATGKTVFEAWERAFEADPVSIFG GIVAINGTIDKETAEKMHEIFLEIILAYDYEDEALEILEKKKNVRIYKIPKKTDKNPKLI KSVRGGILVQDYDDKVYEKLETVTDTKVSEEDLKDLEFANKIVKHVKSNAILLAKDGQTV GVGAGQMNRVGAAEIAFKQAGDKAKGAVLASDAFFPFRDSVDEAAKHDIKAIIQPGGSIR DQESIDACNENGIAMVFTGMRHFKH >gi|229269864|gb|GG666047.1| GENE 75 78662 - 79900 1513 412 aa, chain + ## HITS:1 COG:BH0634 KEGG:ns NR:ns ## COG: BH0634 COG0151 # Protein_GI_number: 15613197 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Bacillus halodurans # 4 407 3 413 428 398 49.0 1e-110 MARVLVVGNGGREHAISDKLYREGHEIFMLGENPGVAQFGTCITCEVGELPAFCKEKEID LVFVGPEAFLVDGIVDLLEKENIRVFGPNKATAILEGSKAFAKDLMKKYDIPTASYETFT DYKKAMDYVEKSDFPLVIKADGIAAGKGVIIAQNLEEGREALKEIMVDQIFAQAGASVVI EEFLEGEEFSLLSFVSGDKVMPMKVVQDHKRAFDNDEGLNTGGMGVYMPIKHITDLDIEE ALEKVVRPTAVAMIKEGRPFKGILFAGLMKTKDGVKTIEYNVRFGDPETEIILLSMETSL YDLAEAVLDDREMEIKWKDRAYIGVVLASKGYPESYQKGFEIAGLDGLDSKVFHMGTKES DGKILTNGGRVLIVCAEGETLAQAREAAYKDVEKIKCDNLFCRKDIGHLSLK >gi|229269864|gb|GG666047.1| GENE 76 79907 - 81550 2103 547 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 1 547 1 556 556 575 54.0 1e-163 MKTDYEISLQAKKEKIEDVAAKIGISADKLIKYGDYKAKIKRENFDNLSENLVLVTSINP TSSGEGKSTVTVGLSDGLNKIGKKSTVALREPSFGPVLGRKGGATGGGYAQVVPMDEINL HFNGDFHAITSAHNAIMALINNHIFQGNELGFKKVMFNYVMDMNERALRRIKINANGKDE RDSSFDITVASEIMAILCLAEDLEDLRSRIGDIMVGYNQDDKPIFAKDLGVEGVVVAILK DAMNPNLVQSLENNPAIIHGGPFANIAHGCNSVIATKTALKYSDYVITEAGFGADLGAEK FLDIKCRVSGLRPKAAVVVATIKALKLHGGVDESNLTEENLDALKEGVKNLEKHVENMKK YNLPVIVALNEFVTDTEAEIKFMEDWAKNFGVEFSLTQVWAKGGDGAIDLANKLVKLVEN NKEDMKLLYEDNLSTEEKINTIAKEIYGAAKVNFTDEARAVLDKIDELGYRNFPVCMAKT PASLTDDGKIKGRPEGFEITVSDIKIKTGSRFIVAYLNKVLTMPGLPKHPNALDIDVDEN DNIINLF >gi|229269864|gb|GG666047.1| GENE 77 81873 - 82457 774 194 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486655|ref|ZP_03916971.1| ## NR: gi|227486655|ref|ZP_03916971.1| hypothetical protein HMPREF0072_2058 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2058 [Anaerococcus lactolyticus ATCC 51172] # 1 194 27 220 220 331 100.0 2e-89 MKKFLIICALALAITGCNKKANLEEGVKISQAKTDVDAVEYFGEEKKLDLAYNIYSLKGL DTEKLEMKLFSIKDGEVFDVAGGPVNATKPSALIGLGFNENSYTLFRVDGEEVKDASSFR ADYSIDKDVFKKTYWLDQGDIKDKEFLILFVGMSKDDKDIDIKSITKEYLRKMSEEDKDL KILAFELILDKKEK >gi|229269864|gb|GG666047.1| GENE 78 82480 - 83070 682 196 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486656|ref|ZP_03916972.1| ## NR: gi|227486656|ref|ZP_03916972.1| hypothetical protein HMPREF0072_2059 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2059 [Anaerococcus lactolyticus ATCC 51172] # 1 196 1 196 196 340 100.0 2e-92 MKKRNVLLSLFLILSLASCKVEVKNAEDVMLTKEDYELNVLDTFDGGDNLDYGAGVYSFK GIRPDDLRLTLSTYENGEISEAFDIELPKIEDKEKLGIAVNSSKVYIYSISDKKTSVLTK YEFKDKKLTHKMSNGWQWDNGGVIKNGEVYPIFASFSNEANSLVTPIFHEDDIRDWIKNN KEYSGMLLELRLEDSE >gi|229269864|gb|GG666047.1| GENE 79 83332 - 83625 341 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486657|ref|ZP_03916973.1| ## NR: gi|227486657|ref|ZP_03916973.1| hypothetical protein HMPREF0072_2060 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2060 [Anaerococcus lactolyticus ATCC 51172] # 1 97 1 97 97 115 100.0 1e-24 MEILGKALYLLLIIVFMRFFYFILRKSFEDKNATTVKMVTRGIVLSIYTIAILSLFAIAI FIPAVGMTKRALAGVVAILMSIYFAIIVKKYIRKEAF >gi|229269864|gb|GG666047.1| GENE 80 83625 - 83894 270 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486658|ref|ZP_03916974.1| ## NR: gi|227486658|ref|ZP_03916974.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 89 1 89 89 142 100.0 8e-33 MWLIFGGAAIITALLNIMNYKNRADIFRFLSLAFTSLTVCAFYADGAGRVIREDWASLMD TMPTISKALCICVALSIIINSISLIKFHR >gi|229269864|gb|GG666047.1| GENE 81 83939 - 84646 643 235 aa, chain - ## HITS:1 COG:no KEGG:Apre_1445 NR:ns ## KEGG: Apre_1445 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 235 1 238 238 243 65.0 4e-63 MEKIKNLKGINGAQLKYIAFASMFIDHFNKAIITPFLTGTGPMVIITTIFDILGRIAFPI FAFMVVEGFFKTKSQWKYLRNLLIFAVISEIPYDMFQSAEFVNTWSQNILWGLALGLFTI MAIDKLKAYIKKRPLWIFVSLLLVALSSLGSMLISSDYEYYAIIIIYLYYIFYDKRLLAS GLGYLVIIKEIYAILGFATVLLYNGEKGKQNKIFNYLFYPVHLLIFGIIRMAFKI >gi|229269864|gb|GG666047.1| GENE 82 84750 - 87374 3797 874 aa, chain - ## HITS:1 COG:TM0272 KEGG:ns NR:ns ## COG: TM0272 COG0574 # Protein_GI_number: 15643042 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase # Organism: Thermotoga maritima # 1 860 1 867 881 984 57.0 0 MSTKYVYNFDEGNKTMRDILGGKGANLAEMTNMGINVPYGFSVTTEACIRYYKEDKKLWD TLNEEITSHIKDLEKHNGKTFGNNEDPLLVSVRSGAPISMPGMMDTILNLGLNDVAVKGL ENKTENKRFAYDSYRRFIQMFADVAMGLDKNKFEEVLTAKKEEKGVKTDHDLDAEDFVDV VEKYKKVYKELAGVEFPQDPRKQLDLAISAVFSSWNNPRAILYRKLNEIDDKMGTAVNVQ TMVFGNMGETSGTGVAFSRNPATGENVLYGEYLMNAQGEDVVAGVRTPEPISHLHELMPE VYDEFYNTAQTLEKHYKDMQDMEFTIQEGKLFLLQTRNGKRTAQAAVQVAVDMVEEGLVD EKEALLRVNPQDLDGLLHPTFTAEAVKNAQSLTKGLAASPGAAVGKIAFSAPEAAKRAKD GEVVVLVREETSPEDLEGMVSAVGILTARGGMTSHAAVVARGMGKCCVSGASDIHVNEFE HTLRVGDVVLTSEDTISIDGSTGEIYAGALATQPPQMHGAFGKFMQWVDKYRDMKVRTNA DTPRDAKQALEFGAEGIGLCRTEHMFFADDRIFQVRKMILASDLETRQAALDKILPMQEE DFYQIYKLMEERPVTVRLLDPPLHEFLPKGEKEISDLALDLKMLPARVKERIAELQEVNP MLGFRGLRLGVIYPEISKMQARAIMQAAIRLNKEGVNVVPEIMIPLSSDVHELDYVKNIV REEIEKVFEEQGMEIKYLLGTMIEIPRAAITADEIAQVTDFFSFGTNDLTQMTFGLSRDD AGKFLPAYIEKDIFEKDPFQVLDQKGVGFLVETAVEKGRKTNPALHLGICGEHGGEPNTV KYLYNVGLDYVSCSPFRIPIAKLAAAQAAIEKNK >gi|229269864|gb|GG666047.1| GENE 83 87388 - 88185 867 265 aa, chain - ## HITS:1 COG:SA1392 KEGG:ns NR:ns ## COG: SA1392 COG1806 # Protein_GI_number: 15927143 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 2 264 3 268 272 150 34.0 3e-36 MKLQIYIISDSSAIALLEMVKLTMGHFDKAYEIKTFDRINSEKKLSQILTSIKDCDSSII YHSFRDSKMKAYVKKYLASKKLKAIGLMDYSVSQMANLLDKTSEKKVQIDSPAKNHQKRI DALDFAINFDDGQDFKGLAFCDVAIIGVSRSSKTPLSMYLASKGLKVSNIPILVDSKVPK ELFEIDPSKIFGLTIDKGVLKKIREERLKSLGLSIDSLYSSKGRIDREIDYALELMNDLG CTIIDVTYKSIEETSEIIINSLNKI >gi|229269864|gb|GG666047.1| GENE 84 88643 - 91279 3022 878 aa, chain + ## HITS:1 COG:CAC2399 KEGG:ns NR:ns ## COG: CAC2399 COG0525 # Protein_GI_number: 15895665 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 876 7 881 881 976 55.0 0 MDTKYNPQDFEKKIYKEWEDGGYFKAGVNPDKKPFTIVMPPPNVTGQLHLGHALNNTLQD IVIRYKRMAGFEALWIPGTDHASISTEAKVVGKIAGEGKTKADLGRDGFLKEAWDWTHKY GGTIKKQLRTIGVSCDWDHDSFTMDENLTRAVKRVFKKMYDDGLIYRGDRIVNWDPMAET AISDAEVYHKDQKGKLWYIKYYYEDSDDFITIATTRPETMLGDLAVAVNPEDERFKDKIG KNLILPLVGRKIPIIADSYVDMEYGTGCVKITPSHDPNDFEVGARHDLGQCVILDSKAHI VEGYGKYSGMERYEARKAMLADLKEQGLLVKIEEIDHAVGYSERTDVVIEPLISKQWFVK MDEFAKMCIDAYNSGELKLIPENLSKTYMNWLENIRDWTISRQLWWGHRLPVFYTEDGEI IVSEDEPDEEGKLEGKKVTQEEDTLDTWFSSALWPFATLGWPEENEEFDYFFPTDILITG YDIIFFWVIRMVFASLYTTGKVPFSHVLFTGLIRDSQGRKMSKSLGNGVDPIDVVNKYGA DALRFTLITGNSPGNDMRYDEDRLLASRNFANKLWNASRFVLMNIDESDDLDFDGKNLTL EDKWILKRLNQVIEDVSKNLDKYEIGMAADRIEDFIWNEYCDWYIEFAKIRLYGDDEDAK ANVKKVLLYVLKSMLILLHPFMPFITEEIYSSLPNKKDMLIVEEWPEIKEEFNFTEEEKN VNSVIKAITAIRNQRASLNVPAKTKQNLTIVAENDKNKDLLEQIKAQFINLASASGVEVL NKDEAEISDEGLVKLVFNEFSVYMSLDELMDYDKERERLQGEIKKIEAEIKRAEGKLSNK GFTDKAPEVVVNKEKEKLADYKDLLEKTKVSLEEIKDK >gi|229269864|gb|GG666047.1| GENE 85 91279 - 92013 984 244 aa, chain + ## HITS:1 COG:SA1419 KEGG:ns NR:ns ## COG: SA1419 COG0500 # Protein_GI_number: 15927171 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Staphylococcus aureus N315 # 2 241 4 238 238 110 29.0 4e-24 MYGEFSYIYDKLSFDIDYEGYAKNIKDLAKKYEIGNENMLELACGSGMLTQYFFDDFERI DALDISTDMLNCFAEKYDIDKVNLIYYDMVAFEQKNFYDLIVILLDSVNYVTNPADLEKL FRNSYDNLKDDSLLVFDINSEMKMREIFGSECYVYEYEDIFYTWDNYLEDDLIDMNLNFF VENPDGTYKRIEEYQQERIYSIEYVKSLLEKIGFTDIRIFDEDTMGVVDEESLRVLFSAR KAAK >gi|229269864|gb|GG666047.1| GENE 86 92010 - 92210 268 66 aa, chain + ## HITS:1 COG:lin2124 KEGG:ns NR:ns ## COG: lin2124 COG1278 # Protein_GI_number: 16801190 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Listeria innocua # 1 66 1 66 66 58 56.0 2e-09 MSIGVVKFFDNKKGFGFIKWGGEDLFVHFSDIVSEEEFKKLETGDNVEFEKIEAPRGPQA KKVKKI >gi|229269864|gb|GG666047.1| GENE 87 92236 - 92532 487 98 aa, chain - ## HITS:1 COG:SA0042 KEGG:ns NR:ns ## COG: SA0042 COG0607 # Protein_GI_number: 15925749 # Func_class: P Inorganic ion transport and metabolism # Function: Rhodanese-related sulfurtransferase # Organism: Staphylococcus aureus N315 # 5 83 44 115 130 63 34.0 7e-11 MTMREITGDDLLKLDSSYKIIDVRTEEEYKNGHIKNAVNVPLDKIMANDFDLDKNDKLVI HCRTNGRSKMALAILTDLGYKNLTLAPGVDLYNYDLVK >gi|229269864|gb|GG666047.1| GENE 88 92622 - 93266 797 214 aa, chain + ## HITS:1 COG:SPy0506 KEGG:ns NR:ns ## COG: SPy0506 COG2039 # Protein_GI_number: 15674611 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Streptococcus pyogenes M1 GAS # 1 211 1 212 215 228 52.0 5e-60 MKILITGFDAFGGEKINPASLILDRLPDKINGNKIEKLTIPTAFFRVADLIERKIVDLRP DIVISLGQAGGRSDITVERVAINIADASIADNDGKKPIDEKIRWDGENAYFSTLPIKALV ENLRKNNIPASVSNSAGTFVCNFVMYNDLYFASKYKNISAGFIHVPYLPAQVIDKKGMAS MSLDEMVRAVEIIIKTSADYKDKEDLKRAEGRIC >gi|229269864|gb|GG666047.1| GENE 89 93266 - 94273 864 335 aa, chain + ## HITS:1 COG:lin1226 KEGG:ns NR:ns ## COG: lin1226 COG2267 # Protein_GI_number: 16800295 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Listeria innocua # 47 335 2 302 306 108 27.0 2e-23 MLVKMIVVLLILLIPQIYFWIKDIRYKSLDMTSKFFKKLTVKKEDFYEEVYLTNTDGFDT FVRILTCDKPKAIVQLVHGVAEHSGNYLDFANFLNKNGYIVVIGDHRGHGQSISTAYPNG YMKRAEELIDDDIMIAKYMKNEYPGLKYYMLGHSMGSMVARLFLRENDDLLDKLIVTGTV PVNKAAALGVFYYNLGCFYLGDKAESRLIDAIVGAKGLDFISYSPQNIEIKANDPLRIFK FKIGYSKTLIEVNKLLGQKHKYKCKNPKLEIYNMVGEDDIITKGEKGVRDSLNFLKEIGY KNIKSKTYKGMRHEILNETNNEIVYQDILEFFDAE >gi|229269864|gb|GG666047.1| GENE 90 94362 - 95381 1138 339 aa, chain + ## HITS:1 COG:no KEGG:CE0621 NR:ns ## KEGG: CE0621 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 51 224 97 250 417 80 29.0 9e-14 MKTTKKVIALALLASLSINALSFTSPRSSSVAYASTKLDFGIKTDKFENKILTFNLKQDE ANKAAALSAIKEIRSEMWDKNVPYTYDLNSNAKNTKLRDYLKAKGINTKEEYINMTKWST DLEKIAIQRMYEVSLTGLSHTRPDGSDCSTTVLPSGVKMYGEILANNSDPYTPSKAFNQW VHGKRKNFGGKSEYELLLESNGVYTDGNAHLHIILDPEYDHMGLCILNTSGMNYVGVEFG YPDKSGNKATGLVGEYTMYFGKAKAQKETSPKVNDKERLEAAKAKLREAIDNNKSEVASA KFLLENAPKTVAKVKDKLENLIKNAEAIIEKSEKALKSI >gi|229269864|gb|GG666047.1| GENE 91 95475 - 96326 823 283 aa, chain + ## HITS:1 COG:SA2374 KEGG:ns NR:ns ## COG: SA2374 COG3001 # Protein_GI_number: 15928167 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Staphylococcus aureus N315 # 2 281 3 282 288 293 50.0 3e-79 MEKIIELLPINNVTNISAVTGGDVNESYKLEADGGSYFLKVHKNKDASFFACERAGLKLF EENGIFAPRALASGDVDGSAYLLMTYHKEERAGSQEDLAKVIADIHKIKSPDGKFGFPYP FIGTACDFDNEFKDTWKEVFLNERMDKLKKMLKKVKLWDEKDLYRYEEVRLVIEKELDKH QTEPVLLHGDLWAGNFMFDEDERPLVFDPSPLYGDREFDIGVSTVFGGFRKAFYEEYKEI MPLKDGYQKRLNFYRLYILMKYLLRFGPVYDSSVNDLMKIITN >gi|229269864|gb|GG666047.1| GENE 92 96421 - 98091 1275 556 aa, chain + ## HITS:1 COG:no KEGG:Apre_1222 NR:ns ## KEGG: Apre_1222 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 168 556 64 456 458 207 32.0 1e-51 MDNIKALIENLLEDIKDVDKKKIKRKINKDHIKANINLDLGEKNDGYFVSKLRLTGNLMD VPSQVKSQSLKLYINFARLSEKNLKMPKTTYLYNQLYVLARDYVEDFIDPYHEKKAMRIY RNLTSLTHENLEPILNVEADKFFETFPALNREVIDFYNLTACGKVVVFWDPDGSLREKYK FAKDEERALLQLGQRRNVLWESPSLSALTINLFLQSLKLVFRKDEINSDILKIYSRPYTL SKNLLDSLLIITEANVRNYFSFLADIKTQKAIDLLIENHCDDILIVFMEYQLAYLDNLKD SKIEEIYLGYLKENPHKSSDIASFIASLSLDRQVAILKSFEDGDNYREILDNLLKDDFTP IKVLALYHIFRNKMENTKDKKALFEIIRQENFEEFLKLVMGRDFDIDLISEILELRKVKP KRIKLNKKLVKKSRQDLSKTVETINDFVGGEENQIDDETGKETNISKGADLKSPVDNMKL SRPSMKLLEKIIKDGYISKDEVNDLAMEDGLFLNVFVNNINDVLYEYTNDQTLVIEGNSV FIDEFYEQMIKELIDG >gi|229269864|gb|GG666047.1| GENE 93 98084 - 99406 1446 440 aa, chain + ## HITS:1 COG:no KEGG:Apre_1221 NR:ns ## KEGG: Apre_1221 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 440 1 441 441 566 67.0 1e-160 MDRINPKEASTIIKSLEAGVVPDIGLGHLLVGRKAEVDELVNILENIEKGDSDLRFWVGD FGSGKSFMLKTIENLALSKNFVASTIDLNPSRRFYATDRKAVNLYSTILENLKTKNARNG NVIEIIIEEWITNIFYSLSSNKGYELKDLMAGGHKDEVIGVILETLAKFKAVGLSYELGQ AISKYYEGFISNDRILKLKAIRWIRGDITTKTEAKKDLGINEIINDDNYFEAIKNLAELF LEIGYKGFVINFDEAVNLYKLPHATTRERNYEKILNIYNECKSNLAKGLFINFGATRKTV FDESRGLVSYGALKGRLGSEASMDSEFVNTNKTVLGLRVLTDEEIYTLLENLVNIYNAHY KTEITFTSSEIISYMEGQLNRPGADEFLTPRAVIKDFIEILDIKRQNAETEISELLLDKF GKLLPVSKDPDNLDDEIEVI >gi|229269864|gb|GG666047.1| GENE 94 99436 - 101493 1475 685 aa, chain + ## HITS:1 COG:alr3331 KEGG:ns NR:ns ## COG: alr3331 COG1201 # Protein_GI_number: 17230823 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Nostoc sp. PCC 7120 # 1 541 12 571 722 283 32.0 1e-75 MRKYIFEKGWPSLTKIQDATIKHIFATDNNLILAAPTASGKTEAAFLPTISKSQDIKTKL KILYISPLIALINDQFKRISEMCEDFDIGVTSWHSEASVSQKEKLLENPTGILLITPESL EAMLVSDKERACVLFKNLDFIIVDEIHGFLDTNRGLQLKSLLVRLYAYTERPPRMLGLSA TIGDKNYDLAKSFFLNGRETNILLDRSKNDLKTSLDYIECEDVNEEIARKILEYALGKST LVFPNSRAKVEKLSYLLKKLVAEKSYEIRVFSHHSSISKLKRTEIENFAKTSRSDFIIVA TSTLELGIDIGAVDQVIQVGSPASVLSLSQRLGRSGRRTRKSVIHQIATDKWDLVQALAA LRLFEEGKLDKIDRPQQSYDIFAHQVLSTLLEKNGLLIEDFYKLNHDLKCFSDISDEEFR ILTDFLLEKDFIEEIDGEYIVGNKAEKLMIMGSFYNQFVVKKTYRVQTDKQTLGEIELGE NLRLADRIYLAGQVWKIEAINHKSRKIKVSLSDKANARSFAGAGGFEISGEIRAKMEEIL LNPLTIDLDAPSKKIINDFGKELKNESYHFVDLDGKTGLRTFRSTKINKTLALILNIKSK SLDYYVEDKSSTLIGPSIKRKVEELRENPLEDEEIKSFLIDNSRLIDGYISLNKFMILVP NELKVSYIIENVLDIEGAKEYLQKL >gi|229269864|gb|GG666047.1| GENE 95 101549 - 102274 776 241 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486673|ref|ZP_03916989.1| ## NR: gi|227486673|ref|ZP_03916989.1| hypothetical protein HMPREF0072_2076 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2076 [Anaerococcus lactolyticus ATCC 51172] # 1 241 1 241 241 411 100.0 1e-113 MKHIKAMLLIGLIVFGGVYLSAAGSIGQKDYEDELRDRKAKVEEYLGKVDGVEKEFVETY LNHEDKDPSVIVSETTNIDTGESFKYIQTRDSEKNIDIDGRLDGVIFFRKGNERCWIDTN KKIYYTDIFDYSKNSKKDSIISGNEDIIYEKFLSGYDKKVEKIGDTYKMTYLDDLNKGSY DIYDLEGNWLESFTDNSQGRWKDVLVSKTTDVNEIYEKLLNLKDTYTKVDDLGQIKNKGK Q >gi|229269864|gb|GG666047.1| GENE 96 102271 - 103017 262 248 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 6 223 1 220 245 105 32 2e-21 MKFERILKVENLEKYYGKEDKRVLSQLNFDLLEGEFLGLMGKSGSGKTTILNCIASIGSF NKGSISYFDKDISLFKRRAISSYRKNVISYIYQDFKLIDILTAYENIILPLTISSKPIDK DRVLEIAKILEIENILDSYPENLSGGEKQRVAIARALLKDAKIILADEPTSSLDSLLSQK VLRLLKTFNKVHKRSIIMASHDLKAISFTDRVLFLDDGKIYNELRRKEDESREEFLVRIE NADRQFLR >gi|229269864|gb|GG666047.1| GENE 97 103014 - 104912 1127 632 aa, chain + ## HITS:1 COG:no KEGG:Clos_0981 NR:ns ## KEGG: Clos_0981 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 3 616 12 658 679 113 22.0 3e-23 MRKNESSKKLYLLILIITSITSYIILSIDKSEVFSYIYEENRYYLLDTVRLIYLVSLIFV FILIYYASFYMVSERKNEIGLLIAEGLSKKKLFRILFKDSLKDLLKANLLGLSLSIFINE FINLLTAKVLSLGLNFHNFSISFKALILTLGISLFLNILSIYTLVRDFYKKNPDEIFRGE IRSRSDFFLFMSLVLFLLGIILNDDNFREEVLILLGLITLFLLAVFFVFSKIFQKFSGKD LIVRKSLSLTFKKDKASLLFTSFMLIVGTFILAYTILTSVASRNALERPADFTLYDSAEK IENLEKDQDMGQMIGEIYPVFGYEYRDIDSDELINLVETNMDLDRATRNNFYFEPGFLLT ESSFDDIYKMKAKLRDDEAIILAKTEKEKYALENTLADKDASIKLRGKVFSLRPLIRSNK IFSNDVIGLPSMVVVNDKVYKSLLGTKAPFAYNVNLKKDFVNSFGFSKGSDMLREAFIKG GYKYESYIWQAKNAISNITENLYTYFYLGLIFILAGLSFFTIRIFMLFEKSKEKLRILSL MGQDMDEIRAIIKKKYTTLFLTVGLVSIIVSIFLFTQIPYTMNIFLKLKLSKIIGSLALI SLAFLILMGLFLRFILRMSYERIADYEEDFNN >gi|229269864|gb|GG666047.1| GENE 98 104890 - 105558 596 222 aa, chain + ## HITS:1 COG:BH0288 KEGG:ns NR:ns ## COG: BH0288 COG0745 # Protein_GI_number: 15612851 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 1 217 1 219 225 156 43.0 3e-38 MKKILIIEDDRNLLNELREFLGNRGYEVSSIDNFLKASEEALDLKPDLVILDINLPGISG FDICRSLKEKSNIPILMLTSRIGIEDEIKGLEIGADEYLAKPVDTRRLILRMEKLLNLFD HFQDIISVGELRLELSTCKLSYKDAYLILPQTEADIVKKLMESYPEIVTKDDLLEAVWST IYIDENILQVNITRLRKKLKNLSPYNIYNKRGSGYGLGVYDE >gi|229269864|gb|GG666047.1| GENE 99 105779 - 106519 729 246 aa, chain + ## HITS:1 COG:BH0289 KEGG:ns NR:ns ## COG: BH0289 COG0642 # Protein_GI_number: 15612852 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus halodurans # 20 244 102 338 346 119 30.0 6e-27 MAKDALVNEFGEDYEKIFDDFQRAIKIKDKRLEESRAKLISYREFIEMWAHEIKTPLAFA NLFLENHKNDFDKEILDKLGLANTNIENYINQILYYARVDASKKDYKMDEVFIKDCIDEA IKAYYPLIAEEGIIIKEDVGDVKVFTDKNTLVFIISQIISNAIKYCEGVINITNKGKNLY IGNNGPKVADQDLAFIFEKAFSGEVDKIHKSTGMGLYLSKLYAKDLAIDIEVVENMDGNF VICLRL >gi|229269864|gb|GG666047.1| GENE 100 106529 - 106942 455 137 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486678|ref|ZP_03916994.1| ## NR: gi|227486678|ref|ZP_03916994.1| hypothetical protein HMPREF0072_2081 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2081 [Anaerococcus lactolyticus ATCC 51172] # 1 137 1 137 137 261 100.0 2e-68 MILKPYRDVFSFHDSKNFAINRRGCDLEISLSSMVIFENGKTFVIDNPKIICHDLIDIKA NMDYPVRIIVFEKEDKNLTIDEFKDYTFDIIEEAYGPNLIHFYGIGNICKDGIPTAFDMT IDIFYRGEIEATWDMKD >gi|229269864|gb|GG666047.1| GENE 101 106952 - 107884 779 310 aa, chain + ## HITS:1 COG:no KEGG:Apre_1219 NR:ns ## KEGG: Apre_1219 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 307 1 304 307 330 59.0 5e-89 MYNMELTKKFELQNCKNKIKYKIIHNEIPISLDKNLDEAIKYLLWYVPNINSEQAKKEEL LTNLEYDDYVFEELMTVMRLRDIDVLFTDSIKTYIIDDFKEGICPCDQKIVMTLADGETK TMSLLRHVRNAIAHGNFNVVSGILIGFDIKRLAEDKIQYRGIFKIKPEGLLVALRKVLFD LSSQEFIAEAFRRAGYKVEPYQEEYQRSHRFDLYAKKNNNRFALEIRNYNYDHKISEKEI SKMINDFRGVVEGLIPVLIINSTYLTEKAKEKLLEADVIILDIKNIKKMHKGRDMVGEIL RDNSIFKIIS >gi|229269864|gb|GG666047.1| GENE 102 107972 - 109084 1795 370 aa, chain + ## HITS:1 COG:no KEGG:Apre_1218 NR:ns ## KEGG: Apre_1218 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 15 370 4 359 360 309 57.0 2e-82 MTEINNQNQGEKVRRNRQERRKEVAIEREGKLEAGRNLSWSSIIAGAVSGAAVFTVLSLL TAALGFGIFSATSANPFAGIGFFTGLWTAITLIISFCAGGFVAGYAARSTGLLHGAITWA VTVLLLFTLVFNAVATTLGIAGQAVGAVAGTAANVAGSALSGVGDAASSAIGAAVDKVGE GIEDVDTEDLQAKLEKYLADTDVAELKPDYLENQVKESKEEIAAAVKAIALNPENAGAEI DKVTKSLSKKAETIANAADEDAIANAVAENTQLSPAEAKEIGKNIYDELDKAAVKTSKSI NESSEKIKDLAKEAKLTADETVDKAKDKANKASDAASIGSVLTFLGLIAALAISAIAGRK GEEFAIRNLR >gi|229269864|gb|GG666047.1| GENE 103 109122 - 110516 1386 464 aa, chain - ## HITS:1 COG:no KEGG:Apre_1217 NR:ns ## KEGG: Apre_1217 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 74 464 64 453 453 287 46.0 6e-76 MTRRKRNYSSRKTEQTGRIRPLRESQIKIVKDELTPREIARKKRAKRERERVYKRRRMTL TILGLLLVIIPSFLIIKRLNTYAKTGYPNFRDKVLKDLSTTAFVSSTEGRSLTSAEKNSD FDILYKTIIRNFAIDKSNTESFDEFTKKSEEYRKKITGSKTDQDFFLLLGEYLSLLNDSY TKILDKDSYTDLFNYYKNKSGSPMKEILENPQVVNRYKRIINEKNVNESSVGIENGYILR ISLPNFRVNDIKKTIDEVIKSVTAAPGISTMVIDLSDNNSLNNLFVNEFAKYFIHQDYSK DDLIFYRGNLLENTLKDIKADENSAYKTAFVKNLTSKYKDKIDYFDLNPYMYYDQISLNI KKDSTFASRNIYILTNANTANEAIKLASILKESSNAFVVKNALDPNPTAQDRIYEFPPSL FVLDHSGLIISLNTARAERPNRYLEYNQRINSKYPISSMLSIIR >gi|229269864|gb|GG666047.1| GENE 104 110485 - 111852 1419 455 aa, chain - ## HITS:1 COG:CAC1553 KEGG:ns NR:ns ## COG: CAC1553 COG0642 # Protein_GI_number: 15894831 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 141 443 152 455 457 160 35.0 6e-39 MTTLKNKIIKNFIAGILSCILVFSILITLLVTLNYNDLFKAIDDKRPKEVVEQFTRLNND SNISGTSMWAYLSNMAIDQKVDIKYYDEKGNLLKHLKGRDESDHSKILTKEYRFIDENNN SKAGKIEIYYNRDYTGVNEMKGNFTQAVLYAITISLAIGLVIAIILSTNISKPITSIGES TLAIKEGNYNLIVEDTDIREIEILKDNINYLSSNLKRQESIRKQYAQDISHELRTPLTNL KLYIEAMKDGVAEADPATLDILSNEIVRLEGLVVGLKNTFDENVSYAILSKSEVNITELI EYIAGSFLAKAKLNNINIETHLDTNVIFTTDRDKLSQIIQNLVSNAIKAIGKDGKIDIRL RETEKEILINVIDTGIGIKEDDIPRIFERFYRVEDSRNTKENGVGLGLAITKNFAEALSG KIKVKSKLGEGSDFAIIFEKNNRITNDKKKEKLLQ >gi|229269864|gb|GG666047.1| GENE 105 111833 - 112546 900 237 aa, chain - ## HITS:1 COG:L0125 KEGG:ns NR:ns ## COG: L0125 COG0745 # Protein_GI_number: 15672379 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Lactococcus lactis # 5 226 3 226 233 186 46.0 5e-47 MEKIKILIIEDEESINNIVKSYLVKEGYEVYQAFDGEEGLRKFLAEDIDLVILDLMLPKM LGEDVMKEIRNRSEVPVIMLSAKVEENDKVTGLRLGADDYITKPFSARELIERIKAVLRR IEKYNIPRADIIKTLDGRLEMDLEYNRFFKDGVEIYLTKNEFSILKTLFSNPNKIYTRDE IIEITFGYDYDAYDRAIDTHIKNIRQKIEDNPKKPMYIKTIYGMGYKSGGIDDYPQE >gi|229269864|gb|GG666047.1| GENE 106 112680 - 112931 268 83 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486684|ref|ZP_03917000.1| ## NR: gi|227486684|ref|ZP_03917000.1| membrane protein [Anaerococcus lactolyticus ATCC 51172] membrane protein [Anaerococcus lactolyticus ATCC 51172] # 1 83 1 83 83 122 100.0 1e-26 MGNLGFIWTLIIGALAGWIASRIMKRDAEMGGIANIFTGVLGGYLGNWLLGNYMGGKFSQ IISAVVGAVILLFILGLIQNRKK >gi|229269864|gb|GG666047.1| GENE 107 113857 - 116709 3536 950 aa, chain - ## HITS:1 COG:CAC2301 KEGG:ns NR:ns ## COG: CAC2301 COG0744 # Protein_GI_number: 15895568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Clostridium acetobutylicum # 2 335 41 364 809 178 33.0 5e-44 MIVFAGITGGAILEVMKTAPKIDADAIKYEMSQNSTVVDEDGNEVDAIATSQFREIVPYD QIPDNLKNAFVAVEDERFYDHKGIDVISIIGSMFENLRAGGIVRGGSTITQQLARNTYLT NDQTYQRKIKEIYLALEIEDHLSKEEILGAYLNRVFMGQNSYGVQAAANTYFNKDVKDLN LAQCAALAGIVQSPSEYSLYKSIKTSEITDEKVLGEFSIDGTKYSAVFNEAPLKRESYVL DKMYELGYIGEAEMEEAKSFNIAKSIEPAERANTEITSYFNSLLEKQVVAKLMETQDMSE NQAWDRLYYGGLKITTTLDQQMQKNLEDIYANFSSYLMGNTSGWNTPPLLNMKYDKWGNI VNSSGKLLYYAKSNFLNENNDIRLSADDAHKDDQGNIVLTSKKAFLDQTKLVFRNYYSLD DENRNLRTHRSGFVDLGSNKNIYLDKEDNIVIAKQYLDENEKFIKSYDDGTFSISKDYYD MDLEGVIQPQSSSVIIDQKTGHIKAIMGGRDQKGQRILDRASSVPRQPGSSMKPLATYTP ALDNGFNLATGIDDVPFMMDENNKPWPNNVYGYYMGVKPLREALKLSINTIAVRTLDKVG IDTSLKYLKNFGIIKEDGKDNFVTSEENKNTNDENLAAMGLGAMTNGMTALDMTGAYAAL ANGGKYIEPLTFSKIVDSTGKVLFEDKDKITHDVTSPETAYQITSALQDAGKFYGNIFLN GTDFATKTGTTDDYNDFWCLGYTPYYTVGIWMGCDDQNISLTGSSAERAALMWNVINNKI LEGREALKFEQPKGIVSMKVDTMSGMLPTEISYADPRGTVRTEIFGPKNKPTEQDDVHEW ATVDSRNNLLVSDKTPEEFVTTRSFINPKSNYNPANFGNIIPRDWQHRVPKTYSDLGEEE DGEDDEEKDKEKDKDKDKDKDKKDKDKSDKPDAQSQEPKAEGEKPENPEP >gi|229269864|gb|GG666047.1| GENE 108 116895 - 118130 516 411 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 11 369 22 386 425 203 36 7e-51 MQEVIQVNVLAKDDDEEIKIYELESLINTAGGKSVAFVSQVVNKVNPRFYIGKGKLEEIR DLADKLEVKTIIFDVELSASQLYNLEEELKLKVVDWTSLILDIFAQRAHTKEARLKIKLA QLKYQLPRINKWFAYLSRQAGGIGTRGPGETMLETDRRAIERDIRSLEKALKDIEKTKRI NRKSRDNIFNISLVGYTNAGKSTILNGMMRLFGSEKYVYSDDLLFATLDTSTRRLDFSNT KVTLTDTVGFIDNLSKELNDSFLTTLEEIKFADMLLIVIDASHNIDGQLATIDKSLDEIE LDGKQIIYVFNKMDKVEDVTATSLYKREYERIFISAKNDEDLHNLKNEIVKVIKEEYREV TMHIPFDKGAVLDYFMTNYDILKTDYDNTGTIIKLEINKGDYGKYESYIDK >gi|229269864|gb|GG666047.1| GENE 109 118099 - 118752 809 217 aa, chain + ## HITS:1 COG:lin2660 KEGG:ns NR:ns ## COG: lin2660 COG1739 # Protein_GI_number: 16801721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 10 202 3 196 211 147 38.0 1e-35 MASMNPISTNDYKTIKGTVVSEFEVEKSVFITTAKHVESEDDALKFIDEVRGKYKDATHN CTAYIINQTPVIKRYNDDGEPQGSAGLPMLSVLEKEEVTNVAVVVTRYFGGKLLGKGGLI RAYTKGVADTVGPNALYKRDYLRVELILSYNILGQIENYLNEEKYQVIDKFFTDEVKIEL YVRTDRYNKFSSDLINMTSANIKINKKEELMLYEVRS >gi|229269864|gb|GG666047.1| GENE 110 118755 - 119486 1119 243 aa, chain + ## HITS:1 COG:FN1661 KEGG:ns NR:ns ## COG: FN1661 COG0217 # Protein_GI_number: 19704982 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 242 1 243 249 228 52.0 1e-59 MSGHNKWSKIKNKKGSEDAKKGKIFTKHARNITVAAREGGLDPEYNASLKTAIEMAKADN MPNDNIDRAIKKASGEAGGDNFERIIYEGYGPGGVAFIVDCLTDNKNRTAPDVRHIFDKF GGNLGTDGSVMFLFEKKGEIVVNGEGKDFDEFMMDALEAGASDVDDIEEGYFQVLTEVND FNDTVEKLREMGYKIEKANVSYLANDIEVDPSHHEKLFKLIDALEDNDDIQEVYYNWASP SEE >gi|229269864|gb|GG666047.1| GENE 111 119488 - 120288 899 266 aa, chain + ## HITS:1 COG:CAC0330 KEGG:ns NR:ns ## COG: CAC0330 COG0682 # Protein_GI_number: 15893622 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Clostridium acetobutylicum # 5 244 17 266 272 193 43.0 3e-49 MEFNIDRVAFSIFGLDVYWYGIIIVSGILISSIFAKKEFERRGFKADIVDDILFTILPIG VIGARLWYVIFEWDYYGAHPKEIIDIRGGGLAIQGGIIFGLIALYIFSKVRDIPMIDLTD ILAPSLVFAQAVGRWGNFTNAEAHGYPTDLPWGIIIDGVKVHPTFFYESLGDFLIFLFLY FYRKKNPAKGFQAGMYFLAYGIVRFFVEGLRTDSLYVFGLRTAQLVSIVFIIVGIALLIF AKQKNLPPYFYKENKKQKEDRIIRFK >gi|229269864|gb|GG666047.1| GENE 112 120397 - 120810 470 137 aa, chain + ## HITS:1 COG:CAC2133 KEGG:ns NR:ns ## COG: CAC2133 COG2001 # Protein_GI_number: 15895402 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 137 1 136 142 115 48.0 2e-26 MFLGEYVHKLDNKNRIMIPSDFREDLEGYFYLTKGPEKSLVVYTEDEFQKRSEALDQLVY ENKKNRAIKRLFFSSTVKVALDKQGRILINKSLKDYAGISDEAILIGNNTTIEIWDKKIW DDYINEVEVNLSDIMDE >gi|229269864|gb|GG666047.1| GENE 113 120812 - 121732 824 306 aa, chain + ## HITS:1 COG:CAC2132 KEGG:ns NR:ns ## COG: CAC2132 COG0275 # Protein_GI_number: 15895401 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Clostridium acetobutylicum # 1 306 1 310 312 333 56.0 2e-91 MKFEHTPVLYRECIENLNIKPDGIYADLTLGKGGHSKLILEKLSAKGLLIGIDQDKAAIE AASENLKDYDNKVFFNTNFENIGKVLTEAGFNKIDGALMDIGVSSYQIDNPERGFSYIHD GPLDMRMNRQNELTAEKIVNECSQDELTRIFFDYGEERFSKAIAKNIVKARANERINTTF KLRNIVMKSARFTEVHPEKRVFQALRIEVNRELDVLTKAIDTIIDFIDKDGRLAIITFHS LEDRIVKNKFKDLATGCICPPEIPVCVCNHVAKVKIITKKPITAKADELRENSRSKPAKL RVCQRI >gi|229269864|gb|GG666047.1| GENE 114 121734 - 122108 340 124 aa, chain + ## HITS:1 COG:no KEGG:Apre_1206 NR:ns ## KEGG: Apre_1206 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 20 124 18 122 131 88 52.0 1e-16 MAERFEKRLVKNKNRNRVRLKVKERPKLTRANQIEKTRKRDRNVKYAISFIAFAFIATMA TFLIIKRINLSNDRFEYNRLQAEIVSYELQRDRLQNNLDEAIDLNSIQRYAIEDLGMVYK KNNN >gi|229269864|gb|GG666047.1| GENE 115 122127 - 123077 781 316 aa, chain + ## HITS:1 COG:BS_mraY KEGG:ns NR:ns ## COG: BS_mraY COG0472 # Protein_GI_number: 16078583 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Bacillus subtilis # 1 312 2 318 324 211 42.0 2e-54 MDNIYLITIIGIFLSMGLGEVIIPILKRKKIGQNIRKVGPQSHMAKEGTPTMGGVIFIIV ALVMSVLMLPRNLETLILIVSMVGFGAIGFIDDFRKLVLHQSEGLNPRQKLVLQFILAGV ITILAYFNDKDSITRLLIPFTDYYLPVSVLGLPIMIFIIVGTTNATNLTDGLDGLLVSVS IPVFVSLAIIAKTGTNLLFSVIMLGAILGFLIYNSNPASVFMGDTGSMAIGGAVVALAIN LKIPIYLVIFGGVYVMETLSVIIQVISYRYRNKKRVFLMTPIHHHFELKGYKEQKIVVGF MVLSTILCLISLVAIL >gi|229269864|gb|GG666047.1| GENE 116 123047 - 124396 1435 449 aa, chain + ## HITS:1 COG:SPy1525 KEGG:ns NR:ns ## COG: SPy1525 COG0771 # Protein_GI_number: 15675424 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Streptococcus pyogenes M1 GAS # 11 437 10 441 452 260 36.0 4e-69 MSNKFGGNTMKKVLVYGLGVTGISSVKALDKLGYEVYTYDKNKKNIDELEGYKYSPISDG KFGKYDFVLKSPGIKPTDDIVQILEKDNEIISDIEVSQRLFPDREKIAITGTNGKTSTTS MVAHILNECGKPAYAVGNIGEGVLWQMYEKKGVFVEELSSFQLHDTQAYKPHIGAILNIK EDHIDWHGSFDDYINSKLKLAANQDQGDYLVINHEDEISQKHIKDFKAQIYEFSSQNIVD RGLFLEGNKICLRNGGCVIEEILDVRDLSVIGRHNYENVMAAILLTYLYGLNLSEIIKAI KTFKSIAHRLEYVRTLSGIDFYNDSKGTNVDSSVKAIESFDRPILIIAGGYDKHIDYTDF VKAFRKNGKLMVIMGATKEKLKALCEKYDIKYILVKDMNEAINTAYSKGENGDVVLLSPA SASWDMYKSFEVRGDEFKDLVNRLEEKCE >gi|229269864|gb|GG666047.1| GENE 117 124387 - 125466 1144 359 aa, chain + ## HITS:1 COG:BS_murG KEGG:ns NR:ns ## COG: BS_murG COG0707 # Protein_GI_number: 16078586 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Bacillus subtilis # 1 358 1 361 363 257 37.0 2e-68 MRVILSGGGTGGHIYPAIAIGQKIREENPDAEIIYVGIKGGPEEKIATKNGYEFKAIDAM GLPRKINKKLFKAIVKNIKGFREAKSIIKEFKPDLVIGTGGYVCAPILYQASKAKIPSIV HESNSYPGMASKFLSGKVDKVLISYKEAAKHFKNQANIVVTGNPVRNNFSLSYTDDDLNK LGIDKNIPVVFSFGGSNGSFALNKAVIEMSKDLNGEFFLLHQTGSRYFDDFLDKCHASKY IKAFKYIDNIDLFYAVSDLVIASSGAMSLAEISSVGKPSILIPKAYTTENHQEYNARTYV DHGASQMILEKDLTGAYLKTQIMSIIKDEEKIKSMGEKACELADNNALDKIYQQIEELI >gi|229269864|gb|GG666047.1| GENE 118 125467 - 126258 438 263 aa, chain + ## HITS:1 COG:no KEGG:Apre_1202 NR:ns ## KEGG: Apre_1202 # Name: not_defined # Def: polypeptide-transport-associated domain-containing protein FtsQ-type # Organism: A.prevotii # Pathway: not_defined # 28 262 29 265 269 166 40.0 1e-39 MNNKNDDRLIKKGSRVFSKKYIAKRHNKEEETGSKLFVFLLVLAFFLGIFYNVFTHPFMK IQDIYINGNRVTEDTEIIKKLKSPLGKNILLYNPTKYEKDIESLEYVKGAKVRKVFPKIL SVKIEEDFPMFAVKKYGKEILITNNGIITDKKPFSKDAKFINIKVTGLETTIGKSFTSSK AILEFINELQASSLIGNISQLNLENKLDIGIMIQDIEVKFGDLNNISYKIKLLEKVLQDV RNKGLEAVSINLNNGDNPLVVVK >gi|229269864|gb|GG666047.1| GENE 119 126297 - 127403 1375 368 aa, chain + ## HITS:1 COG:CAC1693 KEGG:ns NR:ns ## COG: CAC1693 COG0206 # Protein_GI_number: 15894970 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Clostridium acetobutylicum # 8 368 2 366 373 360 60.0 2e-99 MGDFMANINIDMDSNSLAKIKVIGVGGGGNNAISRMRDNGLSGVEFLALNTDLQTLQESN ADIRLQIGEKLTRGLGAGANPLVGEKAAEESKGEIEEAIKGADMVFITAGMGGGTGTGAA PIVAQVAKEMGILTVGVVTKPFTFEGRKRATQAEAGIEKLKENVDTLITIPNDRLLQIVE KRTSMVEAFQMADQVLMDAVSGISELIAVPNVINLDFADVESIMSDQGMAHMGIGRASGE NRAVDAAKAAVNSPLLETSIDGANAVLLNVTAAEVGLMEANEAAELIRESIDSDANIIFG VGQDESLGDEIKITVIATGFDNNGKVRRSDRPSNRADELRAPQRNNQASQQRRSSNPFDD IDLPDFLK >gi|229269864|gb|GG666047.1| GENE 120 127405 - 127872 421 155 aa, chain + ## HITS:1 COG:CAC1698 KEGG:ns NR:ns ## COG: CAC1698 COG1327 # Protein_GI_number: 15894975 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Clostridium acetobutylicum # 1 151 1 151 151 157 54.0 8e-39 MRCPYCNSTNTRVVDSRSTDDDRAIRRRRLCEDCDKRFSTYERYEDSTVMIIKKDDTREA FDPRKVISGIVKSCQKRPVSMDQIEEVAKNIETKVNHTGKKEVTSTYIGELVMDELKDLD SVAYVRFASVYREFKDLESFYEEIINLKDDKDANS >gi|229269864|gb|GG666047.1| GENE 121 127898 - 129217 1468 439 aa, chain + ## HITS:1 COG:SP1790 KEGG:ns NR:ns ## COG: SP1790 COG2256 # Protein_GI_number: 15901619 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Streptococcus pneumoniae TIGR4 # 18 432 5 423 423 337 44.0 4e-92 MDLFELNRKIEMEKSAPLADRLRPKTIDAYIGQDHLVGEGKIIRRMIKADRIYSMIFYGP PGVGKTTLAKIISNSTHMAFEEVSAVASGIGDLKEKIQIAKDNLAYENKKTILFIDEIHR FNKSQQDYLLPFVEDATIILIGATTENPYFEVNKALISRMYVFELKELTDKNLSDLIDLA LSTDEVLKNKKIFLDEKARDKLIKYSNGDSRALLNALEIAIFSENEKDGRIEIDSETIEN STTQKIAVYDKNGDRHYDTISAFIKSMRGSDIDASLYYLAKMLTSGEDIKFIARRMIIFA AEDISNADPFALVLANATFEAVDKIGMPEARIILAQTVTYLAAAIKCNTTYLAIDKALNF VRVNKDRTVPNKLKDSHYEGSKNLINEEYLYPHDHGGYVKTNYLPDAFKDEKFYQAKYLG YEKEMIERLEKIKEGKNED >gi|229269864|gb|GG666047.1| GENE 122 129207 - 130595 1790 462 aa, chain + ## HITS:1 COG:CAC3260 KEGG:ns NR:ns ## COG: CAC3260 COG0017 # Protein_GI_number: 15896505 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl/asparaginyl-tRNA synthetases # Organism: Clostridium acetobutylicum # 3 453 6 456 463 578 61.0 1e-164 MKIRQLMREADSFVDKEVTIEGWIRNSRFSKNVGFIELNDGSTFKNLQVVVGKEIENYDE LDKQNLSASLCVEGKFVATGNNKNPYEIQATKVIVLGESSEKFPIQKQRQTFEFMRTIPH LRPRTNTYRAVFRLRSILAFGLHKFFQERDFVYVNPPIITASDAEGAGEMFNVTTIDPND PPRREDGKVDYNKDFFSKKAYMTVSGQLEAEDYALAFGNVYTFGPTFRAEVSNTPRHAAE FWMLEPEMAFADYNVCMDTAEAMIKYAIDYILENAKDEMEFFNQWIDKGLIERLTKLRNS EFARITYTKAIELLKESGEKFEFPVEWGMDLQTEHERYLSEKIVDGPVFVTDYPKDIKAF YMKRNDDGKTVAAFDMLVPGVGELIGGSQREERYDELVKSMIDNGLKPEEYQNYLDLRRF GTVVHSGFGLGFERAMMYVTGMKNIRDVIAYPRYVNAFANQK >gi|229269864|gb|GG666047.1| GENE 123 130604 - 133006 2671 800 aa, chain + ## HITS:1 COG:BS_leuS KEGG:ns NR:ns ## COG: BS_leuS COG0495 # Protein_GI_number: 16080084 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Bacillus subtilis # 9 799 8 802 804 864 52.0 0 MKEYNPNAIEKKWQKIWRDEKTFKSELDPNKKKFYPLVEFPYPSGQGLHVGHPRPYTAID VVARKRRLEGENVMYTMGWDAFGLPAENYAIANKIHPAIITEKNIDHFRGQMESIGFSFD WDREINTTDPEYYKWTQWIFLQMYKMGLAYKSETSVNWCPSCLVGLANEEVVDGKCERCG ADVEHKLKNQWMLKITAYADRLIDDLDGVDFEDRIKTSQINWIGRSHGADVNFQIKGKDE KLTVYTTRPDTIFGVSYMVVSPEHPILKKFKNEIKNYEAIVDYQHKASLKSDFERSELNK DKTGVMIYGLSAINPLNDKEIPIWVSDYVLMGYGTGAIMAVPAHDERDFEFAKKFDMPIV RVYDSEEDLPVTDIEKGISINSDFLNGLSASEAKKKAIAYIEEKGLGKAKTNFKLRDWVF SRQRYWGEPIPMVYCEDCGWVPVDEKDLPVKLPEIESYTPTATGESPLAKIDEFVNTTCP HCGKPAKRETDTMPQWAGSSWYYLRYADPHNKDALASKEALDYYTPVDWYNGGMEHTTLH LLYSRFWHKVLYDIGVVPTKEPYMKRTSHGMILGPDGQKMSKSRGNVINPDDIIRDFGAD TLRTYEMFMGDFSSVAKWSDEGVKGCRKYLERVYNLLDLVVDGDEYSKELEILTNQTIKK VGEDYENLKFNTAIAQLMTLSNEMRALGKITKKDFKTYITLLNPVAPHLTEELWEMAGFD GRLSQTSWPSFDKNKLSLDEIDLPVQVNGKMRGKIKISKTASQEEALALANLDNNVNTYI KDKELRKVIYVPGKILNIVV >gi|229269864|gb|GG666047.1| GENE 124 133118 - 133747 448 209 aa, chain + ## HITS:1 COG:SP1720 KEGG:ns NR:ns ## COG: SP1720 COG0398 # Protein_GI_number: 15901553 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 20 204 16 201 205 127 37.0 1e-29 MITLHTSYNGDFMEKFIKNQIFNIIGAILLIVGVILAFIGYHKGYFDSLDTFRRLILEKG AWGPLVFMVLQVVQIVVPVIPGGLTCVAGVVIFGAFWGFIYNYISICLGSILVFFISRTF GRSIVLRIFGEDLYDKYKGKLNEDKYDKFFALAIFLPVAPDDFLCYLTGLTEMSVKKFVA IILICKPLSIFAYSMAWALGFDFLIKRYL >gi|229269864|gb|GG666047.1| GENE 125 133756 - 134094 349 112 aa, chain + ## HITS:1 COG:no KEGG:Apre_1195 NR:ns ## KEGG: Apre_1195 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 112 1 112 112 89 45.0 6e-17 MKFEDLVIFLFPAYFVFVGFTSNMIKDKPIDKKYGYRTPLSTKNKHNWYFANSYMAKGSF ALAFAFIIIGLLINHYVDMTRLRRIIFVVIEFMSFIVLGISLEMRLKTAHKK >gi|229269864|gb|GG666047.1| GENE 126 134347 - 134757 395 136 aa, chain - ## HITS:1 COG:no KEGG:Elen_0185 NR:ns ## KEGG: Elen_0185 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 3 132 2 131 142 87 43.0 2e-16 MTKKYFKTAFIYALFGLFIGAFYREYTRIIGFKGITTLGLAHTHSLVLGFFLFIILALTA KSLDLKEDKKEKRFYTTYNFALVLVIGTLIARGFYQIYGLNNSAISAAISGIAGLGHIAI SFAFYFLYSYLKDYIG >gi|229269864|gb|GG666047.1| GENE 127 134738 - 135418 349 226 aa, chain - ## HITS:1 COG:no KEGG:Clos_0666 NR:ns ## KEGG: Clos_0666 # Name: not_defined # Def: hypothetical protein # Organism: A.oremlandii # Pathway: not_defined # 1 220 1 220 225 266 63.0 6e-70 MQAIFETLFDIFYLGTVIFLGTKMLKEGNNEKQYYLFGIMALVLGFGDAFHLVPRAIALN TTGLESFTMSLGFGKLITSITMTIFYVILYYVWRVRYEVRDKKGLTRSIWALAVLRILLV LCPENKFLASSSPFAWAIYRNIPFTILGLIIIIIFYQKSKVTDDIAFKNLWLTIVLSFGF YLPVVLLENTLPAIGALMVPKTCAYIWTILIGYWAMKGEKNDKKIL >gi|229269864|gb|GG666047.1| GENE 128 135481 - 136029 570 182 aa, chain - ## HITS:1 COG:no KEGG:Apre_1074 NR:ns ## KEGG: Apre_1074 # Name: not_defined # Def: transcriptional regulator, TetR family # Organism: A.prevotii # Pathway: not_defined # 4 182 7 184 184 142 42.0 6e-33 MIISKAYILKESRDIVAKEGLNALSIRKLAQNCNVAVGSIYNYFSSKDELMISTIESVWE DIFRIDDSSVSCDDFLKYLSEIFTHLGSGIRKYPNFFTIHSLSFKSQNLGRAKDSMDTYI EGLRENLLQILDKDPNIKKDAFDDDFTKDDLVDFILSTSLCFIVEKNYDKDLLLKIVKKT LY >gi|229269864|gb|GG666047.1| GENE 129 136079 - 136399 302 106 aa, chain - ## HITS:1 COG:no KEGG:Apre_1192 NR:ns ## KEGG: Apre_1192 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 106 1 106 106 176 83.0 4e-43 MEGIIIGVVTFFLIGIFHPLVIKGEYYFGRKVNKFFILCGIIFVALSIYIKSLIPSVFAG VIACCCFWSIGEVIEQEQRVLKGWFKENPKRKAYYDELREKKNLDK >gi|229269864|gb|GG666047.1| GENE 130 136569 - 136973 428 134 aa, chain + ## HITS:1 COG:SPy1834 KEGG:ns NR:ns ## COG: SPy1834 COG1396 # Protein_GI_number: 15675661 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 1 134 1 131 195 85 38.0 3e-17 MKIGDKLKNARLHKKLTQEEVAEKLFVSRQSISNWENNKTYPDIGNVIALSDLYQISLDE LLKGSDNFMKHLEESTDIVKSNKKLIFFIGLALIAMIVMALFTEFLPEKVFLISIFSLAV IVTGLVYSEIIKRF >gi|229269864|gb|GG666047.1| GENE 131 136983 - 137330 312 115 aa, chain + ## HITS:1 COG:no KEGG:Apre_1190 NR:ns ## KEGG: Apre_1190 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 115 1 115 115 144 72.0 1e-33 MDIKLIIMIISGAVFLVGAIILQYNIYQMTQIDAKARGLKHPRLLGVLNISGNNGNAFLL AYLIGRKKYPIQNISSKDLAELESYKKKSLLALSINLIASLVFVIALIYYKGITF >gi|229269864|gb|GG666047.1| GENE 132 137372 - 139132 213 586 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 354 578 28 239 318 86 28 9e-16 MKNIRKLFKLIDTYRPGFTLRVIVTNLILGFLPLINIFAPKLIIDELMGQKRISYCLGLG LLVIVLGFIKEVTYRGLNNYLTLVFEDMSDKLTFKIAKKSLRLPIEKSDSKDIQDMMEQA HYAVWEMYTLYDIIVLVVSAVITGILSLGILVRLNPAIIILLILLVLINKKIVKLIKENE LKYHGESVTEIRSYRFFADFAADLRYFKDVEIYDGQDLVLEQADIYHQNVIRSSTEYFNK NGIYTGIMNVSANGSIIFTLIYLTYKLIDKTISLANFTMYFNSLIQVINATNLIQQNYAK VISVNAQLEVFFNFLEMEEGLLDKGEITDIDTSKINIRFDNVSFKYPASESYVLKDATFE IKNGETLALVGKNGAGKSTIVKLLCKFYEPSEGTIYLNDIDIAKISTKKYYEILSPTFQD FRLFPFRISENITSKLKEEITDYEYKNMAKAFDLLNLSTWIDKQVEKENTFLTYLFSDKS VEPSGGIGQKLALARSIFHEGKFFIMDEPTSALDPRSEQEIFENMLQISKGQTSLFISHR LSSTKYADRIIVCDKGKITENGTHDQLIKQDGLYREMFTTQAELYI >gi|229269864|gb|GG666047.1| GENE 133 139129 - 140838 234 569 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 320 553 120 357 398 94 30 3e-18 MANLEPIMFLLIALYGLFVGIKPFLWIISPAYILENYQTNPKVFPIFFIGLFFISSLISF FDAFVMGNYRMRMNHVRYKLMNMITEYSLYLPYAKKKEKKESEKISDAMKAVESPWHGVG GIMMDLPNVFALLISIGGFLWIFASMDLWILATTIILTIISWSLLNQVPKSYDKYWEEMS PNWDKFSKLNNEMKSPLSKQDILIFDTIRIFKSYYGKTNRDRIKRLGDVNTKTLRIFTLA NVFNLIRDGLIIFWLMTGLISGRISIANFYVYFTAIFAFIAFNHQTMWVFSDIRKNFTAF KPFFRIKDVYKEDKQEIYPDQMEIVLDNVSFKYPGTDTYVLENINLKIKDSETIALVGEN GAGKSTLALILAGLYKPTKGNILINGEDIKESKIDYKKLVSAVFQDSNLLPFSFKENILM STEDRKIDDIYKMTHLDEIINKYEKKDDQTLLRILDNDGVDLSGGQKQRLFLARAIAKSK AKLLILDEPTAQLDALNERELYMLYDDLTHDKSSIFISHRLASTKFCDRIIYLKDGKIIA NGAHEELMESCEDYKDLYNLQAKNYKEVL >gi|229269864|gb|GG666047.1| GENE 134 141027 - 141641 732 204 aa, chain - ## HITS:1 COG:no KEGG:Apre_1187 NR:ns ## KEGG: Apre_1187 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 2 202 3 203 204 135 37.0 9e-31 MKIYENYPEILKFNTKIEDKRFKNNISQLLVEKTIFMPTDDFLINDYESAGGLEVVEVKE NKGKDLVSVKGKYTEDTIELVVDKKLRYRNLSYNTAYILFQIFLEGFYGNVKTNLFLSED KAYITLLNYTSDIDPELFDEMINYSIESNLPITNKAGITEVTGLGTVINSYINFDNTYKI RRFKVLDTRKDGKNTIISFAAGNN >gi|229269864|gb|GG666047.1| GENE 135 141694 - 143883 1492 729 aa, chain + ## HITS:1 COG:BS_comEC_2 KEGG:ns NR:ns ## COG: BS_comEC_2 COG2333 # Protein_GI_number: 16079611 # Func_class: R General function prediction only # Function: Predicted hydrolase (metallo-beta-lactamase superfamily) # Organism: Bacillus subtilis # 472 717 16 289 307 128 29.0 4e-29 MKKRIAFILLGLILGILGFVNFENIHILYLAGTLGALCFFTYAKSKDYAIFFLAVLLGFS LASFKFSRINPREKSNVNIGFTIIDKKKSKNSFRYTIKIDKSKQKAFMFNEADFDIGDKL ECQGDLKLVNTNTNPNLFSYRLYAISKGVGLEFKPSKLNPEISRLKSSDIFLGLRRRFTA YINRIFRKNLSKDSADFVISITLADNLFDREDINRLGLAHILAISGFHFDLLMTLMVSIL SIFDFSYKKSMVISLSLALIYAYIIGFAYSILRVLIVSTIIFLGFLLRRGVDRVKALMVA AILILFINPFAILNTGYILSFMTMLAIYKIYPRLKVYFKEGFLRKNIAFTTSIQFAVLPF SVYYFRYFNFLSIVANFIVVPVFEIAMYLIFGLIFLYPILRSLLKPGFIILDIIIRSIIN MTAVLSKIKIFSLEFMTESIIVSIFLFVLIFVLTNIKTKKNLGKFLQTAIAIVFISLVVR NLDRPIEYQMIDIGQGDAFLLNDKGKYYMVDVGGPKYKDYNSGERILVPYLKSIGIKEIE AAFISHEDSDHAGNLDILRKNFTVKNIITDDKVSKEFKHKYKPVFMKKGDDFKLSEGNIH CVYDGTDGVIEKNDQSLGLVIDIRGNKILTMGDLSSTYEDKLRVKADILKLSHHGSAHSS SKKFIKEVDPKMVLISAGRDNSYGHPSKEALNNVGKIKKYNTQTDGLVKINFYKGRVKVE KYLKGGFFR >gi|229269864|gb|GG666047.1| GENE 136 143880 - 144896 730 338 aa, chain + ## HITS:1 COG:lin1516 KEGG:ns NR:ns ## COG: lin1516 COG1466 # Protein_GI_number: 16800584 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Listeria innocua # 19 319 25 319 343 59 23.0 9e-09 MKYIEFFKNFVNFKTAGIYLFDSKEEYLNTTIIEEAERLINIKDFNLIKIKGETDFETMK NSYETYPVMEDKKIIIWQNIDLSKDGVKNYNIILEKLAEDAKKFPSYATLLIFSDTTPFK GKFYKEISKNGTIVEIDRLNNNELRSFIGRRFIKNKKKISNTYIDEIINRFSYLAYNSEI DLFEIVNSVDKIISNSTDEIIKKEDIEDQLDQVLNLNIFNLTDAIASKNIKGAFKTLLLM EKSGEDLFMIYHMLIRQFRILTTVKSLSNQNFNDSFIMKASKIGSFELRKAKANIKNYSM DSLIDINDRLMDMELRSKSESFEMKDELMKLIAFVGTK >gi|229269864|gb|GG666047.1| GENE 137 145175 - 145363 132 62 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486715|ref|ZP_03917031.1| ## NR: gi|227486715|ref|ZP_03917031.1| hypothetical protein HMPREF0072_2118 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2118 [Anaerococcus lactolyticus ATCC 51172] # 1 62 1 62 62 99 100.0 8e-20 MKNIMQRGKFNTTNRSVEFSESLMVAQILQAIFERFSLFYKHEVRREIIEKLYAAKRARC DE >gi|229269864|gb|GG666047.1| GENE 138 145504 - 145761 408 85 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227486716|ref|ZP_03917032.1| 30S ribosomal protein S20 [Anaerococcus lactolyticus ATCC 51172] # 1 85 1 85 85 161 100 2e-38 MANIKSSQKRIEVAKRNNLRNKARKSEIKTYIKKFEALVEAGNLDEAREIFKVVDKKLKQ AESKNVIHKNRVAATASKLAKKLNA >gi|229269864|gb|GG666047.1| GENE 139 145908 - 146480 700 190 aa, chain + ## HITS:1 COG:BS_sipS KEGG:ns NR:ns ## COG: BS_sipS COG0681 # Protein_GI_number: 16079388 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Bacillus subtilis # 1 177 1 177 184 116 37.0 2e-26 MKEENIKNKKEDSLLDIVWDWVKTILIALAITIFVKQFIIDATIVSGKSMLNTLHSGDWL MVNKIGKHFRDFHRGEIVILHAPDFPNRLYVKRVIGTPGDLVELRDGAVYVNDQKLEEKY VPVDETPAKTDQTSWILGDREYLVFGDNRVNSNDSRDFGKIYKEEIVGHAFFRIYPFADA GLIDNHPYDN >gi|229269864|gb|GG666047.1| GENE 140 146496 - 148307 2124 603 aa, chain + ## HITS:1 COG:CAC1278 KEGG:ns NR:ns ## COG: CAC1278 COG0481 # Protein_GI_number: 15894560 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Clostridium acetobutylicum # 2 601 3 602 602 751 62.0 0 MTKRKDNIRNFSIIAHIDHGKSTLADRLIEKSENISQRDIKEQMLDDMELEQERGITIKL KSIKIHYKADDGKVYDLNLIDTPGHVDFNYEVSRSLKACEGAILVVDASQGVEAQTLANT YLALEQNLEILPVLNKIDLPSARVDEVKLEIENEIGLDTDKAPLVSAKTGLNIDDVLEDI VNNIPAPEDHDDKPLKALIFDSYYDSYVGVICYIRVFEGVVRPGDEIKMMNTGKVFEVNQ VGYTSKGRVATKELRSGDVGFIEASIKQVKDARVGDTITTVDNPTDKPLTGYKEVLPMVY SGIYPAEGESFDKLRDSLEKLQVNDAALVFEQENSQALGVGLRAGFLGLLHMDIITQRLE REYDLDIIATAPSVIYKIKLKGVDDEKELQNPNDFPDPTEIQYIREPVTISEIITPKDYI GQVMDLAQSRRGVLINMTYIDENRVSIKYKIPLSEVIYNFFDSLKSRTKGYASLDYEVKD YQVSDLVKLDILINEQNVDALSLIVHRDNAYARGRGIVEKLKDEIPRQQFAVPIQAAIGG KIIARETVKALRKDVIAKCYGGDISRKKKLLEKQKEGKKRMRQLGSVEVPQDAFLSVLKL DDE >gi|229269864|gb|GG666047.1| GENE 141 148323 - 149168 715 281 aa, chain - ## HITS:1 COG:no KEGG:Cphy_3232 NR:ns ## KEGG: Cphy_3232 # Name: not_defined # Def: hypothetical protein # Organism: C.phytofermentans # Pathway: not_defined # 4 266 5 280 295 82 27.0 2e-14 MNNCQLIKDLLPLYKENLLSEESVKFVADHLKSCPKCKKILTDEIEIKNENTKPLDFVEK RIKKETRFFTLAVVSLIGSILIFIISYLNMPRHIEYEKDLYKVYRGDDIYTVEFSDKVSG IDYTDTEDTIYLDAYTTKYDEFFNKERPKKSLTFHKDEIKTVLYQNHESMPTMVIGSGEV RQTLLPRLIYGFYARISIIGFVFLSLLIALIEKFKKKSISLPIKTIFLGFPLALFLGILA VKGINTASFYPTSDFKYILLLSLGIYLFFIFLSIFKEQKRM >gi|229269864|gb|GG666047.1| GENE 142 149161 - 149643 448 160 aa, chain - ## HITS:1 COG:BS_yhdM KEGG:ns NR:ns ## COG: BS_yhdM COG1595 # Protein_GI_number: 16078017 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 1 154 1 155 163 71 29.0 6e-13 MDIEKIYRIYFDDLYRFLLYLCKNKEVAQDICSGSFIKAMKNIERIDDDKVKSYLFQIGK NTYYNYYKKNKRILLTENIEDFDLALGSFEKDILEKESLSILEKAIDKLENPYKDVVRLR LNDLSFKEIGEIYKKNQNWACVIYHRAKEQLKKLMEENNE >gi|229269864|gb|GG666047.1| GENE 143 149749 - 150609 541 286 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|228004009|ref|ZP_04050993.1| acetyltransferase, ribosomal protein N-acetylase [Anaerococcus prevotii DSM 20548] # 3 280 1 276 280 213 38 8e-54 MDIKVDFTDLVIKTDRLLLRTFRDSDLEDFYQYAKTPGLGEMAGWPHHESLDDTRKVLER FKKNKDVLAIEKDGKVIGSIGLHPVDAEFYQEFKDKKGKEIGFVLSEDFHRQGLMTEAAK ALMKYAFEDLDLDYLSAGYFRNNFKSRDFQKKLGFTYYGSHVVKVPMGILAPVHQTIFTK EDYINNKTGQVEEKKPLKAREELVLKSSSEIIKRLYFEKENEFVPQNSEHSHYIVVIEGR VRVISDKKEYTYFPADALRIKKGKGFKIIARSAARVLLIEVTGKDE >gi|229269864|gb|GG666047.1| GENE 144 150602 - 151723 979 373 aa, chain + ## HITS:1 COG:lin1513 KEGG:ns NR:ns ## COG: lin1513 COG0635 # Protein_GI_number: 16800581 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Listeria innocua # 7 373 15 385 385 262 38.0 8e-70 MNRVGAYIHIPFCEKKCYYCDFAAFPNLEKWIEPYVENLIKEIRLYRERMDVIIDSIYIG GGTPSYIDSKFIEKIIGEVYKFKHDIKEFTIEANPKSLDMEKLKIYRDLGINRVSLGVQS FDNEVLKNIGRNHTSQIAIRDIEMIREAGFTNLSFDLMLNLPGQDFSSVKRDLDMVKKLK PNHISWYSLILDKGSKFYALDKQGKLSLMDDDLEVDIFSYLIDELEKVGLHRYEVSNFAK KGFESFHNKKYWNQEGYLGLGIAAAGYLSNLRYNNTPNLAIYDKMLKANKLPIINKDFID KNENEKEYIIFKLRESEGIDLSEFKNRYGVDFLKKYARQISKFRDDGFFEIDSAIRFTKK GMSLSNEFFVEII >gi|229269864|gb|GG666047.1| GENE 145 151784 - 152737 1249 317 aa, chain + ## HITS:1 COG:DRA0143 KEGG:ns NR:ns ## COG: DRA0143 COG1250 # Protein_GI_number: 15807812 # Func_class: I Lipid transport and metabolism # Function: 3-hydroxyacyl-CoA dehydrogenase # Organism: Deinococcus radiodurans # 1 316 52 335 347 248 42.0 8e-66 MNIQKVTIAGGGVLGAQIAYAVAFHGYNVTIWGRKDDSIERIKPRIDRLHEIYKQELDLA STYIGEKNPNFPRSFFASKEEITEEKIKELKEANEEAYKGLTYTTDLKEAFGDADLVIEA IAEVVDQKKAFYEKIAPYLKEDAILVTNSSTLLPSMFREYTGREERFLSLHFANNIHRQN LAEVMKHDRTDDEVFKEVIEFAKTIGMYPAAIKKEQPGYILNSILVPVINAGLVLYGKGV ADPVDIDMDWKIGTGSPKGPFEIMDIVGITTVVNVLSANPAANDPSSPIGKAYIKLKEML DKGLKGVETGEGFYKYK >gi|229269864|gb|GG666047.1| GENE 146 152908 - 153906 889 332 aa, chain + ## HITS:1 COG:CAC1280 KEGG:ns NR:ns ## COG: CAC1280 COG1420 # Protein_GI_number: 15894562 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Clostridium acetobutylicum # 1 331 8 334 343 173 34.0 3e-43 MQILFTIINSYILGGEPVGSKSLADEYSFDVSAATIRNDMSDLEKKGLLKKAHTSSGRLP SDKGYRFFVNYLLENGLIEKKSRPDLTKLKKTLDKRYNNASDIVNSATKILAGITNLTAV SVTYKNQIKSISNIEMLRVNDYSLLLIVVYDNGLIVNDIIHLNYGIEACDLEFLNNLLQR ELIGSNILHLPDKIRKIEEKLNLNYKYLLDVIQTKMENESNKDSSKEIKIEGLGNIFNFK EFDDIVKAKEFINLFESPDIITDFLADNNDKNLVITIGEENEIDQLKENTIITSYFKVDE NTIGTIGVVGLTRINYKEVIESIKLVSDLLNQ >gi|229269864|gb|GG666047.1| GENE 147 153923 - 154474 644 183 aa, chain + ## HITS:1 COG:SP0516 KEGG:ns NR:ns ## COG: SP0516 COG0576 # Protein_GI_number: 15900430 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Streptococcus pneumoniae TIGR4 # 24 181 20 172 174 89 39.0 4e-18 MADDIKKDENIDEEVEDIKDIEDEIAEEVDEEVVDAEIVDDEKDSSANNEYIEKYQRLMA DFANYKQREEKAKADFKKFASSSLVEKLLPVLDNFDRALKDKDPEDPFVKGVIMTRDELL KTLKNEGLEEIASDGEKFDHNLHHAVMTEANDTVEEDYIIETFQKGYTLNGRVLRPAMVK VSK >gi|229269864|gb|GG666047.1| GENE 148 154486 - 156300 2667 604 aa, chain + ## HITS:1 COG:CAC1282 KEGG:ns NR:ns ## COG: CAC1282 COG0443 # Protein_GI_number: 15894564 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Clostridium acetobutylicum # 1 598 1 611 615 692 66.0 0 MAKIIGIDLGTTNSAVAVMEGGTPTIIPNSEGNRTTPSVVAFSKDGERLVGETAKRQAIT NPHRTISSVKREMGHDWKSPEIDGKQYTPEEISAMILQKLKADAEAYLNDKVTNAVITVP AYFTDAQRQATKDAGQIAGLKVDRIINEPTAAALAYGMDKETDQSKIMVYDLGGGTFDVS ILEVGDGVFEVLATRGNNKLGGDDFDNAVVDYLASEFKKESGVDLTKDLTAMQRLKDAAE KAKKELSSTLTTNVNLPFITAVDGQPVHLDINLSRAKFDELTHDLVEKTRKPVEDALHDA GLSASDIDKVLLVGGSTRVPAVQELVKKIIGKEPQKDINPDESVAIGAAIQGGVLTGEVK DLLLLDVTPLSLGIETLGGVATKLIERNTTIPTKKSQIFTTAADGQTEVDIHVVQGEREM AADNTTLGRFQLTGIPAARRGVPQIEVTFDIDANGIVNVTAKDQGSGKEQKITITSSSNL SEEEIDKKIKEAEKFAEEDKKKKEDIDAKNNAENLVYQARKTVEDAKLEGADKENIEAKA KKLEEAIGANDIDKIKSLSEELTNEIYKVSEKMYKANEANAGTNGASNEDVVDADYEVID EDEE >gi|229269864|gb|GG666047.1| GENE 149 156397 - 157518 1313 373 aa, chain + ## HITS:1 COG:PM0740 KEGG:ns NR:ns ## COG: PM0740 COG0484 # Protein_GI_number: 15602605 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Pasteurella multocida # 2 373 4 368 372 308 48.0 9e-84 MRDPYEVLGVERTATSVEIKREYRKLAKKYHPDLNPDNEEAEQKFKEANLAYEILSDPDK KQKYDTYGAAAFENGGAGFNGGFGGGFGGFGDIFGDLFGDVFSQGYGANRKRPSKGADIQ QVVNLTFQEAAFGTSKEIQIRREEECHVCHGSKAEEGSETHTCSTCHGQGVVNEVSRTPF GTMSRTVTCSKCHGTGEIIDKPCKNCKGTGKEYKSEKIKIDIPSGVEDNNVIRLSGKGHV GENGGPNGDLYVILRVANHEIFKRDGLDIYYEMPISFPTAALGGKIDVATLRKSVEFEIP AGTQTGERFTLKNEGIEDKRTGRTGNLYFYVKVVTPTKLSKEQKEALKAYAEASGSEVRE EKSFFDKVKDLFE >gi|229269864|gb|GG666047.1| GENE 150 157515 - 158813 486 432 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227413264|ref|ZP_03896450.1| SSU ribosomal protein S12P methylthiotransferase [Dyadobacter fermentans DSM 18053] # 1 431 7 434 436 191 30 2e-47 MKNTYNIITLGCKVNQYESEAVEEIFKARGFERKENNASVYVINTCTVTNMSDRKSRQMI SRARKDNPDAIIAVMGCYSQVKPEDVAKIEGVDIILGSRNKEEVVDLCEDMLQNKEAIDQ VISVSEEKSFEDLEISNQTEMTRAYMKIQDGCNMYCSYCLIPYARGNVVSRPMDSIVKEA ERLAENGFKEIVLTGIHVASYGKDFKDGISLIDVIENVAKVDGIKRIRLSSMEPRHITRD FLERMKATKKACDHFHLSLQSGSDDVLRAMNRKYDTKVFKEKTDLIREIFPNAGLTTDII VGFPGETEANHQETMAFVKEIKFAKTHLFKYSKRDGTRAATMKGQVDGNVKKERLKDLEA IEKTNREKFLENQVGKTLSVLFEEKSDMAGFKSGYSTNYLRVNVENPSLPTNEIYDVKIT GLINDELIGEIS >gi|229269864|gb|GG666047.1| GENE 151 158871 - 159212 361 113 aa, chain + ## HITS:1 COG:PA0656 KEGG:ns NR:ns ## COG: PA0656 COG0537 # Protein_GI_number: 15595853 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Pseudomonas aeruginosa # 1 113 1 112 112 144 55.0 6e-35 MDCVFCKIVDGEIPSKIIYEDDELIAFDDLDPQAPIHFLVIPKKHIQSLETLDESDSDLI GKIFLAIRKIAREKGIADNGYRIVNNIGEDGGQTVPHMHFHVLGDRSLQWPPG >gi|229269864|gb|GG666047.1| GENE 152 159254 - 159436 304 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486730|ref|ZP_03917046.1| ribosomal protein S21 [Anaerococcus lactolyticus ATCC 51172] # 1 60 1 60 60 121 100 2e-26 MTEIRVGENESIDSAIKRFKRQCARSGVLSEYRRREHYEKPSVIKKKKNDAAKRKNRKRK >gi|229269864|gb|GG666047.1| GENE 153 159527 - 159706 143 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486731|ref|ZP_03917047.1| ## NR: gi|227486731|ref|ZP_03917047.1| hypothetical protein HMPREF0072_2134 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2134 [Anaerococcus lactolyticus ATCC 51172] # 1 59 1 59 59 83 100.0 5e-15 MLKSKKYLKIGLAMILIAVLFVYYALHHPEASFPWPNSITYTIYMTYLALTIYFIIKKD >gi|229269864|gb|GG666047.1| GENE 154 159715 - 160533 1044 272 aa, chain - ## HITS:1 COG:CAC0307 KEGG:ns NR:ns ## COG: CAC0307 COG0313 # Protein_GI_number: 15893599 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Clostridium acetobutylicum # 4 269 5 279 282 202 42.0 7e-52 MDYQIYFVPTPIGNLEDMTLRAINTLKKVDLIACEDTRESKKLLDFYEINKPLTSYHKFN EQAKSEELIKKANEGVTIGVISDQGMPGMSDPGEILIKKCIDNDISYTILPGPSSILTAL IGSGQDMTTFTFYGFIGKKSKEKNELYEKLKNEDKTSIIFDSVHNLPKTIEDFKKIFPER KLTIARELTKKFEEYKTYTIKDINPEEITLKGEFVLILEGKKADESADISYFDGKIKEMI RDGKSTKEIVKEIKKESSFSKNEIYEYVINFE >gi|229269864|gb|GG666047.1| GENE 155 160533 - 161243 783 236 aa, chain - ## HITS:1 COG:L193121 KEGG:ns NR:ns ## COG: L193121 COG4123 # Protein_GI_number: 15674123 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Lactococcus lactis # 3 229 11 245 250 137 35.0 2e-32 MIKLDYIPRTNLKMIHIDGAYSFGIDSILLADFAKMKKNKILLDIGSGNGILAMMANSLY DLEKVYAVEIQGAKTKILKENLDLNGINNIEIINEDLNKVDFKENSLDYIITNPPYYKID QNIKNKDEEYLISRQELYLNLDDIFAFANKSLKDKGKLFMIHKPERMVEIFNKSGNLKPK RIRFVSSTYDTRPQFILIEFVKNAKDGLKIENPIIIYKDGTYTDQVKKINGTYKEN >gi|229269864|gb|GG666047.1| GENE 156 161362 - 162711 1626 449 aa, chain + ## HITS:1 COG:BH0267 KEGG:ns NR:ns ## COG: BH0267 COG1109 # Protein_GI_number: 15612830 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Bacillus halodurans # 2 442 3 441 447 379 46.0 1e-105 MKYFGTDGFRGEANKNLNVYHAFKIGRFIGDYFSKKNNGSGKILIGKDTRRSSYMFEDAL SAGITSSGSNAHLLHVTPTPSVSYITRTEDFDCGIMITASHNPYYDNGIKIINKYGEKMQ DDFLYKLEEYIDSDIKDIDLAVGEEIGRTVDYIGGRNRYIAYLIQTVTKSFEGIRVGLDC ANGAAFTIAKPVYDALGADTFLINAEPNGFNINKDAGSTHIDGLRKYVAENKLDLGFAFD GDCDRCIAVDNEGNVIDGDSILYILANYMKKDGALDSNTVVTTVMSNIGLYKAFDKLGIN YEKTDVGDKNVHDRMYEKDIELGGEQSGHIIIKKFANTGDGILTSLKIMEAMIESKNDLK SLVRDLKIYPQVLINVRVKDKNTVLDNEKVSASVEKIEKELENSGRVLVRKSGTEPLIRV MVEAETEKIANDSAMEIVNTIKENGLSLD >gi|229269864|gb|GG666047.1| GENE 157 162761 - 163021 165 86 aa, chain + ## HITS:1 COG:no KEGG:Apre_1151 NR:ns ## KEGG: Apre_1151 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 4 84 22 102 106 84 53.0 1e-15 MRGRVYAKESYVVFDTSKIKAYPPLVYYDREDEYLGRFEEEGLYEFDDIEDILLSYSDCC FSNHDLDDLRQLLVKKREEFVRKLLN >gi|229269864|gb|GG666047.1| GENE 158 163108 - 163257 277 49 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486736|ref|ZP_03917052.1| ribosomal protein L33 [Anaerococcus lactolyticus ATCC 51172] # 1 49 1 49 49 111 100 3e-23 MRVKVKLECTECKNRNYDTTKNKTHHSERIELKKYCPFCKKHTVHKETR >gi|229269864|gb|GG666047.1| GENE 159 163266 - 163448 114 60 aa, chain + ## HITS:1 COG:no KEGG:Apre_1149 NR:ns ## KEGG: Apre_1149 # Name: not_defined # Def: preprotein translocase, SecE subunit # Organism: A.prevotii # Pathway: Protein export [PATH:apr03060]; Bacterial secretion system [PATH:apr03070] # 1 60 1 60 60 75 70.0 5e-13 MAKKQDSFFAGVSKEYKKIQWPVKKTTLEYTLIVIAISATTGVAIWVLDKIFHFLLSTIL >gi|229269864|gb|GG666047.1| GENE 160 163456 - 164034 801 192 aa, chain + ## HITS:1 COG:CAC3149 KEGG:ns NR:ns ## COG: CAC3149 COG0250 # Protein_GI_number: 15896397 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Clostridium acetobutylicum # 22 192 1 170 173 159 49.0 3e-39 MTDSLNFETNKEEEKEALLTEIEKKARWYVVHTYTGYENRVADKIQMMIDNEQNPDIVDV TVPTEEYVEVKNNDKKVKTRKLFPGYVMVKMNVTSKSWYIIRNTQGVTGFVGPDGDPVPL TKAEVRKFGVKEKEPVLNIKVKPGDDVNIIAGPFKDFVAKIDEIDNEKGIIKAYVDMFGR DTLIDLEYSDIE >gi|229269864|gb|GG666047.1| GENE 161 164093 - 164521 701 142 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486739|ref|ZP_03917055.1| ribosomal protein L11 [Anaerococcus lactolyticus ATCC 51172] # 1 142 1 142 142 274 100 2e-72 MAEKDIQAIVKLQVPAGAASPAPPVGTALGPHGINIMEFVQAFNAKTADQAGMIIPVEMT IFTDRTFKFITKTPPAPVLIKKAINLAKGSGEPNKNKVGSIKRSQLEEIAKTKMEDLNAA SLEAAVSMIAGTARSMGVTVED >gi|229269864|gb|GG666047.1| GENE 162 164558 - 165271 1189 237 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486740|ref|ZP_03917056.1| ribosomal protein L1 [Anaerococcus lactolyticus ATCC 51172] # 1 237 1 237 237 462 100 1e-129 MAKRGKKYIESKALYDSTKEYELNEALEIVEKTAKAKFDETVELHFSLGVDSRHADQQVR GTVILPHGTGKVQKVLAFVKDDRIDEALAAGADYAGNEEYAEKIQKDGWLDFDVVIATPD MMATVGRLGRVLGPQGLMPNPKTGTVTNDVKQAVEDIKAGKVEYRTDKANLIHVPAGKVS FGANKLAENIKALITEVVKARPAAAKGKYIKSITVASTMGPGVKLQASRASELVETK >gi|229269864|gb|GG666047.1| GENE 163 165469 - 166017 894 182 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486741|ref|ZP_03917057.1| ribosomal protein L10 [Anaerococcus lactolyticus ATCC 51172] # 1 182 1 182 182 348 99 1e-94 MSEKAIAAKQLVVDEIKAKIEGSQSVTLVGFNGMDVKEITELRNKFREKDAEYKVYKNTM MRFAFQELGYDELIEDLKGANALVFSKHDLVDGPKIAVDYRKEKEANEEKLVLKSGIVEG NYQNGQQMMAIATLPATEVLHSMLANVLQAPIRTLAGDLNNTISKLAIALNEVANKKQNE AA >gi|229269864|gb|GG666047.1| GENE 164 166051 - 166434 590 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486742|ref|ZP_03917058.1| ribosomal protein L7/L12 [Anaerococcus lactolyticus ATCC 51172] # 1 127 1 127 127 231 100 2e-59 MASEKVTNLLEEIKNLTVLELSELVKAIEEEFEVSAQAAVAVAAPAAGGAEAAGAAEKTE FTVVLKSAGQSKINVIKVVKDLAGLGLKEAKALVDGAPANVLEGVAKDKAEEVKAALEEA GAEVELA >gi|229269864|gb|GG666047.1| GENE 165 166675 - 167118 446 147 aa, chain + ## HITS:1 COG:lin1791 KEGG:ns NR:ns ## COG: lin1791 COG0735 # Protein_GI_number: 16800859 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Listeria innocua # 17 147 8 142 148 95 37.0 3e-20 MHELIESLRDENYEKRLNKLKKILQDKKIRISHQRLLILDYLITHPIHPTAEKIFKDLKS KDPVISQATVYNSLNLFVKHKLVKELDFNMTSKRYEFKKPSHGHFICEVCGKIEDLEITD IAKPARLKDYTIDTTEVIYRGICPDCK >gi|229269864|gb|GG666047.1| GENE 166 167268 - 167534 295 88 aa, chain + ## HITS:1 COG:no KEGG:CLOST_1866 NR:ns ## KEGG: CLOST_1866 # Name: not_defined # Def: hypothetical protein # Organism: C.sticklandii # Pathway: not_defined # 1 74 163 236 342 109 72.0 4e-23 MIIAFPIMGRAMGQSDMAYGLWTGTAVNDTSSVVAAGFSYSDAAGDFATMVKLTRSLSII SVVLIFRLIHHRLEVKKWDMNMLKRNLC >gi|229269864|gb|GG666047.1| GENE 167 167573 - 167797 283 74 aa, chain + ## HITS:1 COG:no KEGG:Apre_1141 NR:ns ## KEGG: Apre_1141 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 74 264 337 337 84 71.0 1e-15 MVMLNSLGFKSEELSSNLKDISKFLMVAALAAIGLNTKYRDMKKAGINPMLHGFIISLLV VMVAILVIYFMGMV >gi|229269864|gb|GG666047.1| GENE 168 169469 - 170755 1226 428 aa, chain + ## HITS:1 COG:FN0456 KEGG:ns NR:ns ## COG: FN0456 COG1306 # Protein_GI_number: 19703791 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 81 422 37 376 380 162 31.0 1e-39 MLKKKTFLSIFLILMLVFTACAKKDKLAEKEKLQQALESSENIEKKISKKKKSSKKKIGV PYEIGITPDDYNMDYDTSRLLSFEDKKSKYYPKDGVRGLYLNSGLVNNPEVYNKIISLIE NSNLNTVVIDVKDDWGNVTVNFNTDNEEVKYANSKLLNAKTLITDLHARGIYVIARITTF KDSVITKLHPEWGFKRENGSLWANANGEVFVNPFLKEVQDYNIEIGELAAEAGFDEIQYD YVRFAEGFETFGDTLSYPRGEYENKPMAEGDKRVAAITGFVRKARESISAYGLPVSVDVF GYALQAGRASGIGQDFSEISNEADIMSSMIYPSHWGAYSFDIEKPDLEPYELVKRYLKEE QAIFKSLDHSPQSRPWIQDFTASWLGDGNWMVYDADAVQAQIDAIYESGQREYLIWNSNS TYTEGVDY >gi|229269864|gb|GG666047.1| GENE 169 170867 - 171715 689 282 aa, chain - ## HITS:1 COG:STM4423 KEGG:ns NR:ns ## COG: STM4423 COG2207 # Protein_GI_number: 16767669 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Salmonella typhimurium LT2 # 38 281 18 265 274 93 30.0 6e-19 MEKNNEQIIEEENSLNNLEIKILDAQKNINDSKISSRIQFHPFTYFYYLDEGFGRLTIEN DNIEVNAGDLIIINSNVGHTLHLDKSISNVKYLGFGIESVSIAGLDDDESKSINYFHIDN RNKALRFEDYFEDIHREYKSNDIFARSLANATATTLVINLLRKYRKDITIKRDKKVNRQI DYIKSYIDSNYSEDIKLEDLSAMAYMNKFHLISEFKQSYRITPIEYLILKRIEIAKSLLI STNHSMEEISAMVGFNSQSYFNQVFKKKAGQTPSQFRRKHRL >gi|229269864|gb|GG666047.1| GENE 170 171960 - 173627 1734 555 aa, chain + ## HITS:1 COG:CAC1299 KEGG:ns NR:ns ## COG: CAC1299 COG0358 # Protein_GI_number: 15894581 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Clostridium acetobutylicum # 3 465 5 468 596 327 42.0 3e-89 MSLISDDMINQIKENSDIVDIIGEYVDLKKAGSSYKGLCPFHNEKTPSFTVDKKKQLFHC FGCGAGGDVVSFIMQKEGLSYPESLKYLAHKAGINIVFTENPEVNQKKVRLYEINKEIMM YFYKNLLTTKAPQDYLLKRGLRSNIVNTFMLGYAKDSWDDLLSFAKSKNINEDDLFELGL IAKSKNGKFYDKYRNRIIFPIIDTYGRIIGFGGRSIDNTMPKYLNSPESDVFKKRFNLYG LNIFKKQSKRDLILVEGYMDVIALNNNGIDLAVASLGTALTVEQAKLAKRYADNIYICYD SDSAGIKATKRAIEIFKEAEIGVSIIQLGEGLDPDEYVKKYGKEAFENKINEAVDEYNYT YEQILDGYSQASENEKLEKLNQFIGFLASINQDLTREIFINKVSNLFDIDKQTLKGAISK YNNKHHKEKIYKDNFPEPNIVVEEKKTDINAHELEILRLIFNQQEDYKENSDYFDKYLTS PKAKNFRDFLINKEVDKFNKADSDYRYMLDYVMDDNNPILVSELKDKINLYERIQKRNNL RRSPINSKGRDDEQR >gi|229269864|gb|GG666047.1| GENE 171 173614 - 175416 1848 600 aa, chain + ## HITS:1 COG:lin1491 KEGG:ns NR:ns ## COG: lin1491 COG0568 # Protein_GI_number: 16800559 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Listeria innocua # 364 600 137 373 374 329 77.0 9e-90 MNSDDNKLLEDDVLNEIIEEFESLSESQDGMITYSQIFDFDDFKDMDKESQKLILARIAS SGIEIVERSETELDQEEEIEDDIEEEEQEEEIDEKELEKEIDKTVDNLVGIKLDDPVKMY LKEIGKVDLLTATEEIILARRMETGEIAHKSLHGYKFSKQNKNKLANDVFFGDLARVLEE ANSSLLDDRKLSEDTIKDLEGLINMGALFKQIMEDDLDKDQLDQLNAKIIICNIAQNSID DDDLSRKDANILCDLFDSFDHMLNIIENDEVVSMVYSSFNDLLKKAANKDAIKTNDQMII DNLLKTSEFAESIRNRKILSDDEASYLSYIIDQRNMSLKMLNREEFNEDELKKLKVDVLK SQRAKEKLAETNLRLVVSIAKKYVGRGMSFLDLIQEGNMGLMKAVDKYDYNRGFKFSTYA TWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLVQDLGRDPSNEEIADIMGIEV EKVSEIRKIAQEPVSLETPIGEEDDSHLGDFIEDDTAIDPGEAANYTMLREQLNDVLSCL GAREKRVLQLRFGLIDGTPRTLEEVGKEFDVTRERIRQIEAKALRKLKSPNKSELLKDFL >gi|229269864|gb|GG666047.1| GENE 172 175417 - 176109 684 230 aa, chain + ## HITS:1 COG:CAC1302 KEGG:ns NR:ns ## COG: CAC1302 COG2384 # Protein_GI_number: 15894584 # Func_class: R General function prediction only # Function: Predicted SAM-dependent methyltransferase # Organism: Clostridium acetobutylicum # 1 224 1 224 229 94 33.0 1e-19 MEDKKRLLDIINILDSDKKIIDVGTDHGLVPLYLAKNKISSDITATDISKPSLQKLVDRL DDELKMIIKTKVTDGFKGLKSEPNQVAIIAGMGANTIIEIIEGSLDFAKNLDYMVLASNV NTYELRHFLNEKGFFIEKDFLSYENRKYYDILKVFYGKKQTLTFEEHYYGLTDIENRSDL LKEKLAIDKKKNQGFLEEIKKKSQDEMAIKKISDRLLAIRKVEERCEFVN >gi|229269864|gb|GG666047.1| GENE 173 176091 - 176864 698 257 aa, chain + ## HITS:1 COG:FN1316 KEGG:ns NR:ns ## COG: FN1316 COG0327 # Protein_GI_number: 19704651 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 1 256 1 258 258 132 35.0 9e-31 MRIRELIKKLEEKYPFDLQEEWDNSGLQVGNPDEELKGVVLSLDLEEESIDYAIGEANAN LIITHHPYLFNPTNSIDFRDGFYNRLKRCIKNDLTVYAFHTNLDIAKGGVNDNLANILGL RDVKSLESGKELGLGRYGYIDRKPCHKFLEDVKEKLEASGIVVYGNCDKMIEKVGLCGGA GSFLIQDALNQSCDLIITGDVKYHEAMDMANKGIIIADVGHFASENHIIYKLAKEIEQII GQEVYTFSKTDRFRHFI >gi|229269864|gb|GG666047.1| GENE 174 177495 - 178802 1800 435 aa, chain + ## HITS:1 COG:CAC0309_2 KEGG:ns NR:ns ## COG: CAC0309_2 COG0791 # Protein_GI_number: 15893601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 256 434 2 169 171 99 36.0 1e-20 MSKKNIGAALTVIAASAAVATAYATTVTDLENDKHTNSLITEENKEVDSSYSFVKSNYTK EVKNTKIAGSKRNSKKASQEIKKDIIIEKTAKTLVKPQIEKAQEVVAYNKQDLDGVVKYD SKNLDDLIEEKAQAEVKDVVSYDNKKIDDATTYQETTEQAQAAPKAVAKEAPVISNKFVN TPSLYIRASKDATSTSNIVRTIKAGDKLVGHAEGNWFVTNEGYVSVDYLTNYYPQDLVNK INAEQEAKRAEAEAIKAKEAKAAEEARLAEEARKAEEARAKEAQKQQVKQTVKQVEKVVQ QQAVSTNAQAGQGGQGAVNVASQFVGSAYVWGASDPNVGFDCSGLTSYAYKQVGVNLPHS SQAQFNNGYAVDTNNLKPGDLVFFSFGGGGIDHVGMITGSDGSFIHASTPQTGVRYDNIF NGSFQTAFRGARRIY >gi|229269864|gb|GG666047.1| GENE 175 178859 - 179644 820 261 aa, chain + ## HITS:1 COG:CAC2083 KEGG:ns NR:ns ## COG: CAC2083 COG0190 # Protein_GI_number: 15895353 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Clostridium acetobutylicum # 37 256 50 270 278 116 32.0 4e-26 MELLNTTNLRREIIERLENYEFKNKILLLSKNPNEEVNHYKQVIIKRCMDFGIDFIDKVF TKESQEEILDFINSFDINDGFIMLAPFGDGEDLCLLKEKIILKDLDSFTYKSLGRIFEGN KEALPATVRAVVNFMDSEQVDYRGKNIVIANNTNIIGRPLAMYLASKRASVTIINSVTKN PKDYIRNADIFISAIGKAEYYDKSFFSKGTLIIDVGTSYKNGKIIGDINIDSITDLDVKY LGSKNGIGLITTLTLVEGLMH >gi|229269864|gb|GG666047.1| GENE 176 179644 - 180636 739 330 aa, chain + ## HITS:1 COG:SPy0616 KEGG:ns NR:ns ## COG: SPy0616 COG2348 # Protein_GI_number: 15674694 # Func_class: V Defense mechanisms # Function: Uncharacterized protein involved in methicillin resistance # Organism: Streptococcus pyogenes M1 GAS # 11 238 11 248 408 89 26.0 7e-18 MPIVNNDQELKRYNDFVRKSEYSRPMQDTNWSKIKNNWTHDNVYIEENKQIIAAMSVIGI KNTNGKHFLYAPRGPVCDFRDTKLVESLIKEAEPLKDKYNAFLLRMDPELNFDEKLVYDY RKLGYDFRSVGIDTHSFTQPRYNMIIDITSHDEEAIFESFSSKGRYNVRKSIKSGIKTIC KTDDESLDIFYDLTKIMAERQGIGHRPKDYYQRLIEFLGGQIFVSYFEDKPLSASLLIPY GNKVYYLYAASSNEMRNKMPNYNMIWEEIKWAVKNGFDYLDLGGTFSLDTNDGLYRFKQS FCYPDKYSNFIGELDVVYDREKYEEFLITK >gi|229269864|gb|GG666047.1| GENE 177 180693 - 181205 630 170 aa, chain - ## HITS:1 COG:BH3194 KEGG:ns NR:ns ## COG: BH3194 COG2077 # Protein_GI_number: 15615756 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Bacillus halodurans # 12 158 11 155 166 125 42.0 4e-29 MARKGKFGTVDITVLGNELRIGDKAPDFYADKMDLTPYNFYDEEENKIKILSVVPSLDTD VCELQTKMFQKATDSFSDNIVVVTVSNDLPFAQLRFKANKKTDKIKFVSDYNQRDFSSKY GTLIEELKLLNRSVFVVDKDNTIKYVQYLEQNTDLPEYEEAIKIARDLDR >gi|229269864|gb|GG666047.1| GENE 178 181365 - 182015 1076 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486757|ref|ZP_03917073.1| stress induced RNA binding ribosomal protein L25p family protein [Anaerococcus lactolyticus ATCC 51172] # 1 216 1 216 216 419 100 1e-116 MAKIVLQAEKREATGKNQVKKIRKNELIPGVIYAKNQENVNVQFTARDFEKVLRQAGTST IITLDINGEGKEVLIKEFASHPYKNQFLHVDFQAIDQNQPIRVTVPVVLLNRDDMNEVNG VLVQNLENVEVECLPKYIPQTAEIDVKELQIGDNKTVADLDIASNENITILVEEDEVVCS LQEVSEEVVVDEDAEAASAADVPTVNETEADEEDAE >gi|229269864|gb|GG666047.1| GENE 179 182121 - 182744 597 207 aa, chain + ## HITS:1 COG:BS_tmk KEGG:ns NR:ns ## COG: BS_tmk COG0125 # Protein_GI_number: 16077096 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Bacillus subtilis # 1 206 1 208 212 177 41.0 8e-45 MNGKFIVFEGPDGSGKTTIIKKVKELLENKDYSISYYREPGGTSISEKIRSIIIDNDNYM MDAKTEALLFASSRAQLVAEKITPDLKEGKIVICDRFVMSSLLYQGLGRALGVDNIKTIN DFATGGLKPDLTLFFNIDYKTALERKRANFSPDRLENEDFSFHKTIFDGYMKMADLYKDE IKKVDARKSIEDLTEDVINIIYQLLED >gi|229269864|gb|GG666047.1| GENE 180 182746 - 183075 301 109 aa, chain + ## HITS:1 COG:BS_yaaQ KEGG:ns NR:ns ## COG: BS_yaaQ COG3870 # Protein_GI_number: 16077097 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 1 109 1 109 109 106 45.0 1e-23 MKLLVAIVQDADVNFLIDALTEEGYRITKLSTSGGFLKKGNTTLLIGVEEAKLDDALALI EKNCKKRNTTTTIINPTGESSLISSTVPIEISVGGATIFIIDVERYIQL >gi|229269864|gb|GG666047.1| GENE 181 183072 - 183860 515 262 aa, chain + ## HITS:1 COG:aq_1855 KEGG:ns NR:ns ## COG: aq_1855 COG2812 # Protein_GI_number: 15606894 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Aquifex aeolicus # 3 141 27 178 473 63 32.0 4e-10 MSILDNQLKNNSLSNAYIIEGEDLAYNLEYAKDFAKKVFASYGFTGNIDINPDLEIIDKD IIDIGTIRSLIKDMVIRPINNKIKIYIIQNAQNLRQEASNAMLKSLEELKSYSLIIFTVD NRGKIIPTIRSRCQLISLNTVNTNLNVDMDRLSEIFAKVYDGDLSTFYKERDFLLNFKED KASFMEALIKILSDIVDNKYLDKLGNSTYAYNIENLSKLDLTKIEKLLAKFEQIYGSFKN NVNFELSVDNIFLNIYREGRHS >gi|229269864|gb|GG666047.1| GENE 182 183860 - 184669 608 269 aa, chain + ## HITS:1 COG:BS_yaaT KEGG:ns NR:ns ## COG: BS_yaaT COG1774 # Protein_GI_number: 16077100 # Func_class: S Function unknown # Function: Uncharacterized homolog of PSP1 # Organism: Bacillus subtilis # 2 254 3 255 275 246 50.0 2e-65 MNVVGIRFKGAGKIYYFSANNLILNFKDRVIVESSNGLELAEVALANIEIDEKKFDKTLS PVIRKATEIDLETYRLNLEDANEAIKIAQEKAYSYKLQMKIVDSEYSFDRSKITFYFTAD NRVDFRSLVKDLASIFKNRIELRQIGVRDHAKLKGFHGTCGQKSCCSRFMTDFSPLSIKM AKDQGITLDPAKISGVCGRLMCCLSFEEDNYLRAKKYMPKPGTRVETVDGVGIVLTNDFV KEACKVRVKTEDDVEIEEYYKASDLVKCN >gi|229269864|gb|GG666047.1| GENE 183 184793 - 184966 318 57 aa, chain + ## HITS:1 COG:no KEGG:Apre_1124 NR:ns ## KEGG: Apre_1124 # Name: not_defined # Def: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 57 1 57 57 71 94.0 1e-11 MAYKIDENTCISCGSCEGECPVGAISQGDAAYEIDANACIDCGSCSAVCPVEAIDQE >gi|229269864|gb|GG666047.1| GENE 184 185405 - 186562 862 385 aa, chain + ## HITS:1 COG:no KEGG:Apre_0746 NR:ns ## KEGG: Apre_0746 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 384 1 394 394 246 44.0 2e-63 MDIEILINQIYNLILNDPIIGYAMVVFVVLFLFFIISKTFRKSGLFLLATTFLVDYTIRS LPFGIYSQFPLAYKVVTGLYIVGFINFLIRVTIMLVKASKKYEDEDQSSLKNFMTFTGIR PFFIMLIINVINFNSFIPKNIISLFTSLSFLYMAFRTLYSTYLYLSEKESLKINDNMDFE DIKAYLYDPDDKSSVNHGRILRKKLKNHGKSNNISKTQKATNKKTISPISISDINKDVKN IKMLKNIEKDLTDKDVIKLVEESNPNITKIALINLKTGDEHSYTSKKANFHVDEDHEYKI TLSFDDYNDYDYGRFMDLLIAYGVEKEVYKFELTIISRLNEDFKLVFFDPSQIVDMEKEG AKSQTGREISMNFPRYKINFIKGNY >gi|229269864|gb|GG666047.1| GENE 185 186563 - 187312 462 249 aa, chain + ## HITS:1 COG:no KEGG:FMG_0111 NR:ns ## KEGG: FMG_0111 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 4 245 9 254 258 156 42.0 6e-37 MIDKRNFKDVWHTSREHFTSGDLKIIACGAMFLSHLAQSGFLYGFDCVKLADLFTLIGRI AMPLFCFMVVQGIILSENKEKYLKRLFIFALISEIPFDLAFSDSFFNIYSQNVFFSLFLG ALMVYFWERIQISDINNTLKLCGGIILFLAISFIARLFMTDYDAYVIFAIALLYFAKDNR LLTALAIFVGFAFEANFTGMEFTIPYIVYLSIPLILLYNGKRGSYNRWYFYGFYPAHLFV IYLLKVILF >gi|229269864|gb|GG666047.1| GENE 186 187320 - 189413 175 697 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|169827482|ref|YP_001697640.1| 30S ribosomal protein S1-like protein [Lysinibacillus sphaericus C3-41] # 568 694 204 341 378 72 28 2e-11 MKIIEILSKELNINEERIENVIKLLDEGSTVAFIARYRKEVTGNLTDVEIREIEKNLGRL RNIEKRQEEIIKLIDEKGQLTDELREEILASNSLTILEDIYAPYKSRRKTRADIARELGL EEFLTKLLTEISSEDEALQAAVSYIKEGLEDEKDVISRSLDILAEDIANTIDARNIIRRD GFLRASLITSLKAEEDSSYESYHDFSKKLKDLKSFQILAINRAEKEDILNVKIEFSDAYN KSLIYKLVSDGKNFNPYQKELVNLTIDDAYKRLMVPSITTELRNKLTEEASDESIRVFGN NLKPYLLQRPLKGQVVMGLDPGFRTGCKVAVVDKNGKYLDQAVIYPVEPHKKEKEAIATL KALIKKYGVTLIALGNATASRETELVVDKLIKEVDGVSYAIVNEAGASVYSASSLGEEEF PDLDVTIRGAISMARRLQDPMAELVKIEPKHIGVGQYQHDLDSKKLDEELSKVVEDAVNE VGVAINNASYKLLSYVSGLNQNLAKRIEEDFKEGKLVYRKDLLDVKGLGKKTYELAAGFL RFPSSPEILDNTAVHPESYKIAKKIQDLDLDKIDIEKVAEELEVGIPTLKDIIAELKKPG RDPREDNPEVLTKKEIMGIDDLKVGMVLKGKVRNITDFGAFVDIGVGIDGLVHVSEISDK FVKNPHDELTNSQVVSVRIIEIDKKKERIGLSMRSEN >gi|229269864|gb|GG666047.1| GENE 187 189413 - 191125 2118 570 aa, chain + ## HITS:1 COG:CAC3178 KEGG:ns NR:ns ## COG: CAC3178 COG0442 # Protein_GI_number: 15896426 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Clostridium acetobutylicum # 1 567 1 565 570 516 48.0 1e-146 MRLSNYYMPTLREDPVDAETASHKLLVRGAFIRQQASGIYSFLPLGKKVLNKIEAIVRDA MDSYGAIEVATSILQPRQIWDKSTRWETFGPEMFKLKDRHEREYALGPTAEEAFVDLIKD ELNSYKQLPVNLYQIVDKFRDEKRPRFGINRSRDFLMKDAYTFDEDQAGLEKAYMNMWES YEYAFDKMKLDYKIVEGDTGAMGGHKSHEFIALSESGEGVILYTENSNSAYTDEKARSFI SPLEEELKNIELVETTDKKTIEDVSTFLNTEAKRCAKAIDLIVQGEPVFVFIPGDRELNM AKLISYLQVPEHEIEMADDETIEKHTKAPAGYTGPIGIEDARVIVDESLTKINNLVVGAN KPGYHYINANYGRDFEGEIAEDLILAKEGDQAFDGSGTYKSARGIEVGNIFQLGTKYSKA LDATFLDQNGVSKYFEMGSYGIGISRSISAIVEQYHDDKGIIWPTSVAPFEVIITLIKPN DEDQAKLAEDIYKKLKARRIDVVLDDRKERPGVKFNDRDLIGIPYRITVGKDAKDSIVEY STRAEMENKNIDANEAINLVCENIQKDLED >gi|229269864|gb|GG666047.1| GENE 188 191187 - 192050 1256 287 aa, chain + ## HITS:1 COG:CAC0827 KEGG:ns NR:ns ## COG: CAC0827 COG0191 # Protein_GI_number: 15894114 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 286 1 287 287 372 67.0 1e-103 MLVNAKEMLDLAYENGYAIGHFNTNNLEWTKAILLAAEAKKTAVIISSSEGAAKYMGGFK TVANLVKNLHDALGITVPVAIHLDHGTYEGAKACIEAGYTSVMFDGSHFPIEENLEKTKE IVRLAHEKGISVEGEVGGIGGEEDGVASAGELADVEECKNLAACGIDFLAAGIGNIHGVY PADWQGLNFDRLKEISEAVKMPLVLHGGTGIPDDQIKKAISLGVSKINVNTECQIAFAKA TREYIEEGKDQQGKGFDPRKLLLPGTNAVQALVEEKMDMFGCENSAK >gi|229269864|gb|GG666047.1| GENE 189 192097 - 193404 1438 435 aa, chain + ## HITS:1 COG:NMB0617 KEGG:ns NR:ns ## COG: NMB0617 COG1158 # Protein_GI_number: 15676520 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Neisseria meningitidis MC58 # 1 430 3 416 419 399 50.0 1e-111 MDNLKDKKLVDLREIAKNLGIDSISKYRKDELIKLIEEEEKNKDEESKEARENDLGAKFD CDGILEILPDGFGFLRTQLYESGDDDIYVPPKQIKMFRLKTGDFIEGIAREKHDKDKFSP LIFVSTVNGIKPADAFNRDLFEDLTPIYPNERISVETDPKNISGRIIDVISPIGRGQRGL IVSQPKAGKTTLIKDIERSLEKNYDDLKIIVLLIDERPEEVTDFIRFVNEYRDPENVLMR TEVAASTFDMPPQNHIDIAEMVLERAKRFVEEKKDVVILLDSLTRLARAYNIMTPQSGRT LSGGLDPLALVGPKQFFGAARNIENGGSLTILATALVDTGSRMDDMIFEEFKGTGNMEVH LDRRLSNRRIFPAINIEKSSTRRDDLLLSSEEMEAVYKLRKSDLNNTESIVELIDWMKRT KSNKQFVELVNSSLK >gi|229269864|gb|GG666047.1| GENE 190 193471 - 193674 372 67 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486769|ref|ZP_03917085.1| ribosomal protein L31 [Anaerococcus lactolyticus ATCC 51172] # 1 67 1 67 67 147 100 3e-34 MNKELHPEYHQAKVTCMSCGNEFTVGSTEEEIKVEVCNNCHPFYSGKQRTAERGGKVERF NKKYGRK >gi|229269864|gb|GG666047.1| GENE 191 193727 - 194521 241 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225303543|ref|ZP_03740066.1| protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific [Halothiobacillus neapolitanus c2] # 31 231 78 290 326 97 32 5e-19 MKISDFLKIDYDTSLIALTYILGKSKSYILMNQNLELNSEQNQRLNDIINKRKVSYPLQY AIGQWEFYDLRLKVDERALIPRFETEIIVDYLIKSPMKKEKILDIGTGTGAIALALAKNI ENSFVIGSDIEDRALSLARENKVFTGTKNVDFIKSDLFKDISGAYDLIISNPPYIDKKDY ESLEKELYFEPKSALYGGEDGLDFYREIIKNAGAYLCEGGHLVFEIGYNQKDILNKLLVN QGFVNIENIKDFNDFDRFIIAQKG >gi|229269864|gb|GG666047.1| GENE 192 194525 - 195601 1345 358 aa, chain + ## HITS:1 COG:CAC2884 KEGG:ns NR:ns ## COG: CAC2884 COG0216 # Protein_GI_number: 15896138 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Clostridium acetobutylicum # 1 355 1 355 359 384 56.0 1e-106 MFENLEHVRENYKQLEAKLADPAVLADMDQFRKVSKEYNSLKPVVEKYEEIKNAEDTIAE NQELINEADDQDMIQMLKDEIEENKDKLEVLKDEMQILLIPKDPNDEKDVIVEIRPGAGG DEAGLFAGDLYRMYNMYADKAGFKTEEIEVNTQGVGGIKDATFVVRGEGAYSKLKYESGV HRVQRVPETESGGRIHTSTATVAVLPEVDEVELHIDPNDIRTDVYRSSGNGGQSVNTTDS AVRLTHIPTGLVVAIQDEKSQIKNKEKAMRVLRARLYELEEQKRNKEIADNRKSQVGTGD RSERIRTYNFPQGRITDHRINKTIYQLDDFLNGDIEDMINSLIAEDQTRKLEKVGKEE >gi|229269864|gb|GG666047.1| GENE 193 195695 - 196531 604 278 aa, chain + ## HITS:1 COG:CAC0606 KEGG:ns NR:ns ## COG: CAC0606 COG0053 # Protein_GI_number: 15893895 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Clostridium acetobutylicum # 1 272 42 313 403 186 36.0 4e-47 MGIGMNILLFLSKIFLGIYTRSTAILNDAFNNLSDSVVSIMSLFGASFSKKPADEEHPFG HGRVEYIMALLVSIVIIYVGINLFINSAKSFNDPNPNGLSLLSFVILFAGILLKVYIYLL NSKLYNDLESDLNLGVLLDARNDIISTTAIILGVFLQRYVNFNLDAAMGVVVAFFVTKPG IDLFNETVRYLLGERIDEEVEKKISDILLSGDYIIGFHHLDIHQYGKGHIAGSCHVEVPG NLTVAELHKEIDRIEKKIRKETRVILTLHADPTYNIVD >gi|229269864|gb|GG666047.1| GENE 194 196541 - 197575 904 344 aa, chain + ## HITS:1 COG:BH3771 KEGG:ns NR:ns ## COG: BH3771 COG0009 # Protein_GI_number: 15616333 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Bacillus halodurans # 12 341 18 345 348 291 46.0 1e-78 MKTEILKIDRENIDTDAIKKAANFIKSGQLVAFPTETVYGLGADGINDEACRKIFKAKGR PSDNPLILHISHISMLDNLVEEITDKHRKLFELWPGPMTLIFKKSKSIPDAVTAGGDTVA IRFPSDQIARALITEADTPIAAPSANISGRPSPTNASDVYQDMDGIIPVIIDGGESNIGI ESTVIDLSGDEPIILRPGFYTYEFLKDILSDMRLDDSLVDSSKIPKSPGQKYKHYAPKAK LRVFIGEDVPTHLLSEAEKYKSDGKKVGILAFEEDKEKFNSYPYISLGSRKDLSTMSHVL FSSLREMDRLGVDLILAEGVKEKHLGKSIMNRMKKAAANDVNFI >gi|229269864|gb|GG666047.1| GENE 195 197587 - 198216 831 209 aa, chain + ## HITS:1 COG:lin2682 KEGG:ns NR:ns ## COG: lin2682 COG0035 # Protein_GI_number: 16801743 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Listeria innocua # 1 209 1 209 209 282 63.0 3e-76 MKNVTVLDHPVIKHKISILRDKNTGSNEFRSLVTEIAMMLAYEATKDLELEEYDVETPVA KTTGYRLTGKKIGIVPILRAGLGMVDGVLEVLPAAKIGHIGMYRNEETLQPVEYYCKLPS DVENRDILVVDPMLATGGSACDAIDRLKEYGCKSIKLLSIIAAPEAFKLLEEKHPDVKIY ISQLDERLNENGYIVPGLGDAGDRLFGTK >gi|229269864|gb|GG666047.1| GENE 196 198226 - 199503 1575 425 aa, chain + ## HITS:1 COG:BH3749 KEGG:ns NR:ns ## COG: BH3749 COG0766 # Protein_GI_number: 15616311 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Bacillus halodurans # 5 422 2 417 440 413 54.0 1e-115 MAKKEILIIKSNGPLKGEVSISGAKNSALPILAACVLGTEEIILDGVPELKDVEIMVEVL KHLGSEVKYLDQNTLSINSASINTCETPYELMDKMRASFVVMGPLLSRFHAAHTKAPGGC NIGSRPIDLHLKGFEALGAVNTVNDDEIAIVAKNGLVGTEIYLDFPSVGATQNIMMAACL AKGKTTLENAAKEPEIVDLASFLSKMGANIKGAGTSTIVIEGVEKLTGTRHTIIPDRIEA ATYMTAAAMTRGDVLINNVIGSHIRPVIAKLVEMGVDVEEIEDEDKIIVKAPKRLKSTNI QTLPYPGFPTDAQAQFMALMTVCEGESRIQETVFENRFMHVEELMKMGAVIATSGNRATI AGVKQLHGADVRATDLRAGAALVMAGLVAKGTTRVFDIYHIDRGYSNLVDKLTKLGADIK RVTVD >gi|229269864|gb|GG666047.1| GENE 197 199506 - 201662 2025 718 aa, chain + ## HITS:1 COG:CAC2854 KEGG:ns NR:ns ## COG: CAC2854 COG0507 # Protein_GI_number: 15896108 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Clostridium acetobutylicum # 1 714 2 734 739 478 41.0 1e-134 MKLEGIVTNIRYRNDESGYSVMTLETLDSDITIVGTMPFFNEGDRIEVEGEFTYHDKYGE QINVKNVILKKPSDKESIIKYLSSGNIRGVGKKTAEAIYAVFGNESLDVLYKNPDKLLKV EGIGRKKLGDIKLSAEETRDSRRSLEFLQGLRISYNLAMKIYNKYGENTVDIVKSNPYKL IEDIKGIGFTMADSLARNMQMEINSAFRISAGLTYVIENEADFNGHTSLEMSYLIDEASK LLKADKNLIEDQIQEDLLSGKLELVEIEGKSYVYSRSLYKAEKSVAMSLAKKISEAYIFD VEINEDLRAYSDEQKEAIEGAFANMLLVITGGPGTGKTTIINAITTILEKNGLSFALAAP TGRAAKRMQEATDSEANTIHRLVGIRPDMPIAEYNEENPIEKDYIIVDEMSMVDIFLMKN LLDAVGESTALILVGDSDQLPSVGPGNVLSDILDSPAKSIRLKKIFRQAGESNIIINAHR INEGKYPVLNQPNKDFFFIDTSGEDFKKDLLSLIKDRLPNFYKFDPVKDIEVLALSRKTS WGVDSINKSIQEVINKEKLFLKINDRLFKLHDKVMQIRNNYDLKAINNVTNYDGVYNGDI GIIIDIDTNEESIKVEFDDGKIVNYKKEDVKDLDLSYAITVHKSQGSEFKCVIIPMMQVA PMLLTRNQLYTAVTRAKKLVILLGDKLYIKKMVDNNRSNDRNSNLSYWISEMEKILAD >gi|229269864|gb|GG666047.1| GENE 198 201652 - 202281 483 209 aa, chain + ## HITS:1 COG:TM1584 KEGG:ns NR:ns ## COG: TM1584 COG1040 # Protein_GI_number: 15644332 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Thermotoga maritima # 2 207 1 202 202 72 28.0 7e-13 MLIDYLFLDKNTCTFCQSEYIYKYGLCRDCFDKLDFVDNKFLIGDYDCYSIYFYNEFFKR LIGLYKFERKTEFSKIFSKMIYDYGIEKNIFDVDYILPAPSSRKTLLHRGFDHIRMITDD FIEKIGPVYLDGFSKVKDTKAQHDLGKEERSKNLIGAFKFDKDLTGKSVLIIDDLVTTGN TSLEIIKVLGKANVKDIKILALASERRVL >gi|229269864|gb|GG666047.1| GENE 199 202316 - 203698 1352 460 aa, chain - ## HITS:1 COG:CAC2279 KEGG:ns NR:ns ## COG: CAC2279 COG0641 # Protein_GI_number: 15895547 # Func_class: R General function prediction only # Function: Arylsulfatase regulator (Fe-S oxidoreductase) # Organism: Clostridium acetobutylicum # 1 447 3 449 454 430 47.0 1e-120 MIHQYKAKGFNIVLDIYSGSVHLVDDVTYDIIENYKNIEIEELKTKIKNKYNLGDEEIEA AFDEVCDLISTGQLFTDDAFKDLAIDVTKKPTNIKALCLNVAHTCNFTCDYCFAKGGKYH GPDAIMTKEVAKMAIDFLLENSGRHHNLDIDFFGGEPLMNLNVVKYTVDYARSKEEEFNK HFNFTLTTNGLLLNDDTIDYLNENMKNVVLSLDGRKDKHDHFRKTLAGTGSFDLIVPKFQ RLVEKRGDKGYYMRGTYTANNLDFTEDIKTYLDLGFKRTSLEPVVGSPDNEYALKEEHLP ILFDQYEKLADMMMEAIDKDDKFIFYHYMIDLENGPCIHKRLSGCGSGTEYMAVTPTGDL YPCHQFVGNDEFKIGNIFEGVKNKDLVNQFKTCNCYSKSECRQCWASMYCSGGCAANNYN ATGDLNHTHDYSCKLFKKRIEMALAIKIYEFMKQTETEQA >gi|229269864|gb|GG666047.1| GENE 200 203817 - 203969 96 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRILTLNTRNLHKSQKDGGCGECQTSCQSACKTSCGVANQECVSKKENK >gi|229269864|gb|GG666047.1| GENE 201 204015 - 205367 1337 450 aa, chain - ## HITS:1 COG:CAC0297 KEGG:ns NR:ns ## COG: CAC0297 COG1982 # Protein_GI_number: 15893589 # Func_class: E Amino acid transport and metabolism # Function: Arginine/lysine/ornithine decarboxylases # Organism: Clostridium acetobutylicum # 6 449 10 481 481 166 28.0 7e-41 MLNKIIDDYLKENYYPFHMPGHKRSKLLNPKLGYGRDFTEIDGLDNLNDPKEVFVEMEKK IAEIYDVKDAIISTNGSTSGILASIRSLSQNNKNILIQRSSHKAVYNACLINKLKVDYLG VKTNDIGAIVDISFEDLEDKLKNKTYSAVVVTSPSYEGYILDIEKIYKICKKYKAKLILD MAHGSHLFLTGAYKNAFDIAITSFHKNLPALTPGAAVLINDDTMIKDLRFAMAIFQTSSP SYLILQSIAYILENISELENLNQELKPRLRDLYNLKLKNLSLYDSTNKDRSKILISTKNT NINGKTLGDLLKKEKIEIEMAYPSYALLIASIYDTDEGFIRLKNALIKIDKAIEKSENSF KFTYHNPKKVYDLYEAIDMQAKLIDIKNSKVRVASNFIYAYPPGIPILAPGELIDSKVLE NMENLQKNNIKLNLDGTSIAVLIDKMDENC >gi|229269864|gb|GG666047.1| GENE 202 205454 - 206326 759 290 aa, chain + ## HITS:1 COG:BH3647 KEGG:ns NR:ns ## COG: BH3647 COG1316 # Protein_GI_number: 15616209 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 14 281 37 311 359 140 31.0 4e-33 MENKFIRIIKSIIIFLLFVVVFAAGFLLLGFFKGQNIDNPLADIVGQKDESLILLAGVDS TGEDTGTRTDTLMLIKANSKDNSVDMISIPRDSYVSINGKMDKINAAHSYGGIDLTMDVV RNFLGINLDKYMVISFEAVIKGIDALGGMDVDVSDKVGAAMGISPGVHKMTGDQVLSYVR FRKGYQNADLGRINTQQDFLKQFIKESSKIENLPKLPKVYQAMKPYIKTNMSLKELSSLA MKFKSVDSSKLNSVRLEGEGFNMGGISYYKIYPESIENIRTTYLNSFLRN >gi|229269864|gb|GG666047.1| GENE 203 206365 - 206883 692 172 aa, chain + ## HITS:1 COG:sll1430 KEGG:ns NR:ns ## COG: sll1430 COG0503 # Protein_GI_number: 16330593 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Synechocystis # 1 170 1 172 172 191 53.0 5e-49 MDIKSLIRVIEDYPEKGISFKDITTLLKNKDGFRETIDLLEQKLQGYDFDYIAGVESRGL IFGAPLADRLNKGFIPIRKPGKLPGEIEKVSYDLEYGTNELEIHRDALKKGDKVVIIDDL IATGGSAKAAAKLVEAIGGDVVCFEFLIELTSLKGREVLKDYDVISIVEYDH >gi|229269864|gb|GG666047.1| GENE 204 207067 - 207996 1152 309 aa, chain + ## HITS:1 COG:slr0093 KEGG:ns NR:ns ## COG: slr0093 COG2214 # Protein_GI_number: 16331768 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Synechocystis # 3 305 6 313 332 163 33.0 5e-40 MQYRDYYEVLGVDKKASANEIKKAYRKLAKKYHPDLHPDDESANKKFTEINEAYEVLSDP EKRNKYDTFGANANFSGGQNFDPRDFGFDFSNFGNGSYTYTSSNGSGFSDFFDTLFGGFG NTSSRKAQGFGGFNQGFGSGFSKKAKTKLDTEVSISIDEAIKGTTRKISVKTEAGIKDIE VNIPEGIKNRNKIKIDGSKYGLNADIYVCVKIKETEDLKLDGIDFIKKVKISPWDAYFGT KKKISTIKGNILVTIPEKITSNKKIRLKNLGYTDRKNQTGDLILEVLIENPDLNEEQVEL YKKLKEIEG >gi|229269864|gb|GG666047.1| GENE 205 207998 - 210574 1732 858 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 5 858 5 812 815 671 42 0.0 MDNNKLTQKSIEAINNANSMAIKDANPEVNEFHLALSLVDSPSSYVSMVLSKMGVDVNAY KKKIEDKIENLPKQSGNANTYPSQVFQRIFLKAEDEADAMGDSFVSVEHIFLSLLKENTE MSPINKEFNISYKVFKDYVLKVRNGQKVTTDNPEETSNPLEKFGRDLTQEARDGKIDPVI GRDAEIRNALRILSRRKKNNPVLIGQPGVGKTAIVEGLAQRIVNNDVPEPLQGRRIFSLD MGALVAGAKYRGQFEERLKAVIEEVKKSDGQIIMFIDEIHTIVGAGKSEGAMDASNIMKP MLARGEIKVIGATTLNEYREYIEKDGALERRFQKVMVEEPSVEDTISILRGIKEKYEIFH GIRIQDSAVIAAAELSDRYISDRFLPDKAIDLMDEACATVRTEIDTMPAYLDEQKRKLLQ LQIEITALKKEEDDYSKKRLADLEKELADLSDTFNEDFLKWKEQKSAIDDVKSIKEEIDK VKVEIDQAERNYDFEKLSELKYGKLAELENKLKEASSTNNDESSIKEEVTDEDVADVVSS WTNIPVSKLVETERTKILHLGETLHERVIGQDEAIKAVSDAIIRARSGLKEQNRPIGSFI FLGPTGVGKTELAKTLTEAMFDDEHNMIRIDMSEYMEKYSVSRLIGAAPGYVGYEEGGQL TEAVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFKNTIIIMTSNIGS EFLIDGLNKDGTIKEENQKKVDEVLRRSFKPEFLNRIDDIVMFTPLTSDQVYKIIDLQID NIRKRLADRDIKLEITPEAKEYILANSYDVEYGARPVKRYLQRNVETKLGKLIIEGKVAD RDTAILDLVDNQLEFKTK >gi|229269864|gb|GG666047.1| GENE 206 210762 - 212882 2111 706 aa, chain + ## HITS:1 COG:VCA0511 KEGG:ns NR:ns ## COG: VCA0511 COG1328 # Protein_GI_number: 15601271 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Vibrio cholerae # 4 706 5 706 706 499 39.0 1e-140 MLQVIKRDGTKVDFNKDKITIAIEKAMHSPSGIYVEGQAAEIASEIEERSKNKREISIYE IEDLVYYKLIDRKNPATAKSYESYKSVQAYKREQNTSDDEIIGLLNQTNIDVMDENSNKN PIIASTQRDLIAGEVAKDIAKRKLIPLDLVEAHDSGAIHIHDLDYLIQPIFNCCLVDMKD MLDNGTVVNEKMIESPKSFQVACNVMTQIIAQIASNQYGGQSINIACLSPYLEKSFEKNL KLASEILKDDDQAKKMADALTQRDLESGIQTIQYQINTLMTSNGQSPFVTLFMHTDENDP YLDQTVEIIKEILKQRIQGIKNDQGVYVTPAFPKLIYVLDENNINPDSKYFDLTRLAAKC TAKRMYPDYISAKKMRENYEGNVFAPMGCRAFLPPYKDKYGEYKFDGRFNMGVCTINLPQ IGILAHGDEKLFFEILEKRLDLVKRVGILRYDHLAKVTSDSSPIHFQHGAIARLKKHESI KPLLENGYATVTIGYIGIYEATKLTIGESHTTKRGHDFAMKIMEMLNDKKKEWSEEYGIA FAVYGTPAESLTHRFASIDRERFGDIKDVTDKGYYTNSFHVDVRENISVFDKFDFESEFQ KLSTGGCISYAEIPNMTNNIEAVLTMIEYIYDHIQYAEFNTKSDYCGNCGYDGEILLDDN NQWYCPNCGNHDRATLTVVRRTCGYLGENFWNEGRTKEIKARVLHI >gi|229269864|gb|GG666047.1| GENE 207 212879 - 213379 376 166 aa, chain + ## HITS:1 COG:FN0312 KEGG:ns NR:ns ## COG: FN0312 COG0602 # Protein_GI_number: 19703657 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Fusobacterium nucleatum # 1 160 1 165 168 139 43.0 3e-33 MNYAQIRKYDVANGPGIRTTFFLTGCDRNCPNCFNTDYMDFNHGKKWDEEAEKEVISYLK LNQVEGLTVLGGEPFENPVGLLQALRNIKKEVSKSIWVYSGFVYDDLVNISLAREILEEI DVLVDGEFIEELKDLSLKFRGSSNQRVIDVKKSLENNEVVILNGYK >gi|229269864|gb|GG666047.1| GENE 208 213404 - 213991 898 195 aa, chain + ## HITS:1 COG:TM0961 KEGG:ns NR:ns ## COG: TM0961 COG1704 # Protein_GI_number: 15643721 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 29 193 29 193 193 159 49.0 2e-39 MINQNKRSGAAGILIAIIAVIVIGLLMIVPTYNRLAGSNENVNQAYAQVQNVVQRRADLI PNLVNTVKGYTDHEADTLTKVTNARAGVQNATNPKELAEANDQLTRAIGDINVVVEAYPD LKADSQFVQLMDELAGSENRISTERKKYNEAVQVYNTDIRRFPTNLIAKFTGYKPAEYFK ADASAQEAPKVNFGN >gi|229269864|gb|GG666047.1| GENE 209 214023 - 214853 770 276 aa, chain + ## HITS:1 COG:TM0962 KEGG:ns NR:ns ## COG: TM0962 COG1512 # Protein_GI_number: 15643722 # Func_class: R General function prediction only # Function: Beta-propeller domains of methanol dehydrogenase type # Organism: Thermotoga maritima # 7 173 2 163 238 102 37.0 1e-21 MGKARFKKLWLLLIIFFCLFQSKTYASIPSPTDNYYLDKLNLLDEPTKENINKTNKQLED KTGSQVVVMTLPNPDDLEGNYYGTEIFNAWKIGDQEKDNGVLILLLMSKQKGHNQINIIT GYGIEGRLNDGKIGRIIDNFMLDRLRDGAYSQALNEGFNAVVGEIAAEYDVKLEKDYTSY QNNLSNENSEDGLSLKTIFILLIIFIIVSSIINRNNYFGGGGGGGFRRRRYTYPRFGPGW SSWGGSSFGGGSSGGFGGGFSGGGGSSGGGGAGRSF >gi|229269864|gb|GG666047.1| GENE 210 214863 - 215366 731 167 aa, chain + ## HITS:1 COG:no KEGG:FMG_0135 NR:ns ## KEGG: FMG_0135 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 162 1 163 165 202 64.0 3e-51 MKGYVASHFFNDAMFRWTEDLAQYIENNTSLELYVPQRNADINDKKNNDAIITDIKISQA DTAHLKEANILIANLDGLTIDDGVAAEIMAHGVMRELELDHGIDFPRMIIGIITDMRYLG TGENKLYRNLMVVGKVKEHGHLVVGYAGDDSFKKEVVDCINKFMAEN >gi|229269864|gb|GG666047.1| GENE 211 215425 - 216093 499 222 aa, chain - ## HITS:1 COG:HP1287 KEGG:ns NR:ns ## COG: HP1287 COG0819 # Protein_GI_number: 15645900 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Helicobacter pylori 26695 # 1 216 1 215 217 150 32.0 2e-36 MKFIDYLYEQTKDIWQDLYNHPFIEGLIRGDLEISRFKYYLEEDYIYLWEHVKIFAIGLA KTNNKEIIRKFAYLINNCMENEMAIHRGLMKDFDIDIKEIENRQANLTNLSYSNYRISQS ILGGYEEILMVLMACDLGYVNIFRHIDRVNPQAKNHEVYGKFITGYLDPVYLSYVDGTVN EINELSKEMTKEKMDALIEIFKNCLTYELKFWDMVYNKGDLF >gi|229269864|gb|GG666047.1| GENE 212 216335 - 217036 988 233 aa, chain + ## HITS:1 COG:TM1293 KEGG:ns NR:ns ## COG: TM1293 COG0500 # Protein_GI_number: 15644048 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Thermotoga maritima # 5 233 5 206 207 112 32.0 6e-25 MKAKFDGLANKYDQWFMENENMYLTELNVVEMALKSVKTEKSLSVGCGSGLFEVSLKDRG LTITDGLEPSKDMAEIAEKRGLNVKIGIIEDAKLEDEYYDCIYLNGSSTYIEDLESAYKT VYKALKPGGHIVVIDVPKESSFGILYQFAAHAKTFDLANFEGILPKSPYPIELVTNTVMT TTPYKRDVLKKVGFKDFKFYQTLTTDPAYSDDYVEEAQEGYDKGSYVAIVGQK >gi|229269864|gb|GG666047.1| GENE 213 217146 - 217661 461 171 aa, chain - ## HITS:1 COG:no KEGG:Apre_0997 NR:ns ## KEGG: Apre_0997 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 171 1 171 171 162 64.0 6e-39 MNKKISVDSLVKAAMLTALSIIFSRFFGIFITPSIKFSFGHLPLMLAGIILGPLSGALAG LAADLIGVAINAGGTPHFGFTLVSVLTGLIPGLITVYGKRKNISLKVQIGLMVFFVFYIC HMFLNTLWLSQLFNNPYKVMLATRFIKVLIDGIINYILLYFIVTKLVPKIK >gi|229269864|gb|GG666047.1| GENE 214 217570 - 217767 71 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIPKNLEKIIDKAVSIAAFTSESTLIFLFIFSPFYQRSAVAIKNRKFRLETTTHFPALI ALYLL >gi|229269864|gb|GG666047.1| GENE 215 217807 - 218559 938 250 aa, chain - ## HITS:1 COG:lin0935 KEGG:ns NR:ns ## COG: lin0935 COG0778 # Protein_GI_number: 16800005 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Listeria innocua # 1 227 1 227 246 147 35.0 3e-35 MNQTIKNQLNHRTIREFTGEKINEETIKTLLEVVNMSASSNGMQNMSIIRVTNPKIKEKL AENGNQAYMARATELWIFIVDLKRNYEIAREMGLENDTMISFDKFIQGFTDAIIAAQNLT IAVESLGLGANYFGNIHNDTKKVIEILKMPKLTYPAVGVGFGVPNQNPQIKPRLDINLKT FENSYKIYDSYLNLIKEYDEEMTTYYDLRDSGRKSESFSSQIPKKQGSIVKNRNKMFKTL MDQGFVINPD >gi|229269864|gb|GG666047.1| GENE 216 218616 - 220955 1830 779 aa, chain + ## HITS:1 COG:CAC1672 KEGG:ns NR:ns ## COG: CAC1672 COG1199 # Protein_GI_number: 15894949 # Func_class: K Transcription; L Replication, recombination and repair # Function: Rad3-related DNA helicases # Organism: Clostridium acetobutylicum # 2 772 7 789 791 599 44.0 1e-171 MKIRTSVRNLIEFVMRSGDIDNRFRDNTRMIEGIRAHQKIQSKYDMTYKKEYKLKNTTIY KDVVFEVEGRADGLGKKDGIYLIDEIKSTSRKLDELDDNNKLHWAQAMCYAYFYALDKSQ AQMLISLTYVSVDDYKSRIFEKSFTFEELNEFYFKLLDEYIIFSKILATNKEKRDRSIKD LDFPYESYRKGQRKMAVAVYTAILDEKNLFVDAPTGIGKTISAIFPTIKSMSEGLTDKVF YLTSKNTIANEALKTLNLLKNKGLFVKALHITSKEKICLNEEVSCNPVDCPYAKGHFDRV NDALKDILENENIIDYDIIVEYAKKYMVCPLEFELDISLYSDFIICDYNYVFDPNVFLKR FFEEVIDSYVFLIDEAHNLLDRTRDMYSYSFKDTTFTSLIELLDEKKDKKLRKKLGQIVD DFYKLGEISKREYYFTSDYIDALDKDLLSLSKIMERFLVEKIDHDAYDLVLDLYFEINKY LKISDYFTEGFYNVISYDSESMERSFEIKCVDPREVLKNKYKLARSAIFFSATLSPMTYF VKALAGEESLKLRLEMPFNQDHLLILKKNLSTRYRDRNRNLALVAEAINEFVTCKKGNYF IFFPSYSYMEDVAEYYRDNFTNDILNQERIMTGESRSEFLNEFTYESNKVGFLVLGGIFS EGVDLIGDRLIGSMIISVGMPGVSKERDLIKYHFDKEGYNGFDYSYTYPGLNKVFQAAGR VIRGEEDRGIIYLLDDRYSWQKYMNLFPKHWTNQVMVNNKQEFEQIINKFWSIDEEKTN >gi|229269864|gb|GG666047.1| GENE 217 220936 - 222306 1302 456 aa, chain + ## HITS:1 COG:CAC1435 KEGG:ns NR:ns ## COG: CAC1435 COG2265 # Protein_GI_number: 15894714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Clostridium acetobutylicum # 1 455 4 453 456 353 41.0 4e-97 MKKRPTKDIKITQMKYPNISIGFDDNDRKVEFKGGLLGQTVRVKAGKKNKDRIKAKYIEL LEESKLENAREFCPQAAICGGCAYQKLAYETELMLKHGMIKDLFKDNGIEYNNDISINRS PITSGFRNKMEYTFGDSIKGGPLVLGLHRKRRFYEIVDCKNCNIVDSDFNTIRSKVQEYF REKETDFYHKMAKEGLLRHLVIRKAMHTDQIMVILVTTSDSTFDDTRLRLFLNMLLDIDF DGRIFSVYHVINDSVADAVIPEKIKLIYGKEYITEEMMGLQFRISPFSFFQPNVFTAEKL YQKAFDLAEIDKTMDILDLYSGTGTITQLMASVAKSATGIEIVEEAVEKAKENARINGLD NVNFLCGDVLEEIEKVGNKYDVVVLDPPRAGISPASLEKILNIDCKKFVYISCNPKTQME NLKTFIEKGYEIKDYEIYDQFPNSRHLEAIALIQKM >gi|229269864|gb|GG666047.1| GENE 218 222621 - 223208 505 195 aa, chain + ## HITS:1 COG:no KEGG:FMG_1423 NR:ns ## KEGG: FMG_1423 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 195 1 195 195 345 97.0 5e-94 MNTLKNYIKENLVITNKEAEELGYTRHNLSELTKIGQLERLRPGLYQLKGKVIDDFVLIS SNSNRIIFSHQTALYLHDLSDRTPNVFHISVPQGYNASHIKKRYEDLQVHYVKKDLYELG KTEIKSPQGNLIPVYDIDRTICDIIIDREKIDKQIFIEAIKRYFKSQNKNLRRLIKYSRL FKIENEIRKYMEVLS >gi|229269864|gb|GG666047.1| GENE 219 223593 - 223946 394 117 aa, chain + ## HITS:1 COG:no KEGG:Apre_0680 NR:ns ## KEGG: Apre_0680 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 111 164 274 278 165 88.0 4e-40 MAYPLETILAEKYETIIRRNIATTRMRDFYDLYTVYKLKKDQIDYKILKEAIERTSKKRG SQEIMKDYEEIIEDIKEDSYLRSLWDVYLSENKYIGDLNFDKVVSVVTILSNRINEM >gi|229269864|gb|GG666047.1| GENE 220 224304 - 225614 728 436 aa, chain + ## HITS:1 COG:no KEGG:Smon_0660 NR:ns ## KEGG: Smon_0660 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 12 436 1 424 424 575 72.0 1e-162 MCENIKLGDYILNKITGVTRRDIFDLFRKGITEDNWLSIENIFYPYYGRFDIVEFLKRLY NLADLKSIDSRVDNAEEEIIMHTHNGDYPDDWIFEDERFQLFDGEDNILLDFICEVFHPE VRDENGVWERYLERINVLLKEDGYEIVATSKLSGRDVYSWKIYRIIPDMYIPFSERNKSL ILNKKISVKLPNGVRYQLFKVMNEYDEIFYLTDKTNWNYTKYSSECVLEDINKFYLPKHY VNKELVEIKGFKDFQEGTSPSTVFDVIESFSRHTTEYEKFEKEINTIFKLNDINIELKSG EIHSINNIAIELDSSIRISEAGIEELIATADDLYRKGKYSYAVEKIWDAFERIKTYYYPA LNKKKSAEKIIKDISFENENIEMMFDVEFKTLTDIGNNYRIRHHEINKIDISKELHYKYF YKRCLALISVLLENLQ >gi|229269864|gb|GG666047.1| GENE 221 225885 - 226451 320 188 aa, chain + ## HITS:1 COG:no KEGG:Smon_0661 NR:ns ## KEGG: Smon_0661 # Name: not_defined # Def: hypothetical protein # Organism: S.moniliformis # Pathway: not_defined # 1 188 87 274 274 248 73.0 1e-64 MSGEFGEILVYDYINFVLKHYITRTRYLEKVNPDMPVSGSDVIGYKVKNINKPSKSDHLI VAEVKTRSSKVGNKNRLCEKTVKDAIEHSIKDRVRIGESLNAEKRRLLNRSRNDEAKIVE RFQNKTDNPFTLDFFAVAVLDNELYSDQVVLDVVNSQHENIKSTNILIIHSKELKLFLRD LYRRACLC >gi|229269864|gb|GG666047.1| GENE 222 226445 - 229543 1446 1032 aa, chain + ## HITS:1 COG:MA3203 KEGG:ns NR:ns ## COG: MA3203 COG1204 # Protein_GI_number: 20092019 # Func_class: R General function prediction only # Function: Superfamily II helicase # Organism: Methanosarcina acetivorans str.C2A # 225 666 6 398 730 105 24.0 7e-22 MLIESTSKYYLKKVRAKAKMYEYGVPENLHIEVEDQANDLILLCIGIVGDIANEIWNMEQ APIILPKEKEEELYFVSRFFDSYFQSKMSIEMNPYYILMGAVTYYFCNMNGSSKVMISIM PDLSDFEFFASGLENVIMWMLDNNHKFDVGKIDGKYRNYIVQLVDYYNMFFDCKNPNNSN FDDFRSYVYKLGNDREILFTDIILAILKKKIYNSCINLMPLYSGIDKNDWISTFKNNALM KEMWSSQILLGKEGIFEGKSGFIQMPTSSGKTTSVALAVQAAFLSHRTSIVVVVAPFRAL CKEIMLDMEKFFAFDENISVTEFSDIPEPSEIELVKSESIGKKIFVMTPEKLEYILKHDT EIIESINMIVFDEAHLFDDESRGTDYELLLTTINSYLRPDAQKILVSAVISNAEQLNAWI NDDGIVIKNNTIKTSEKTVAFNTFTSTNVNNAYSNLYFVDPNKYLEEEFYVPRVVQTREI NKKGNEKKLRYFPDFKNNTQDVGIYYAIKLIRNGCIAIFCSKKDSVNKILLRFIELKERG VSLEDFSRLSDYAECSKIAYLIREHFGENDLYTAALNGIVGHHSGIPNGVRIAEEYALKK SLVRCVVCTSTLAQGVNLPIKYLIVSSVYQSKQVIKVRDFHNLIGRTARAGKETEGTIIL TENIYKNSKEDYKLNKYKRLLNADNSEECSSNLLKLVREVDLGNNRTISFDFLKKYINSR YSNKAEYTELKKGIIEYKEQGKECGEEIFYKMNEIDHILVSLENFILGFVDVEDESFEII KSTYGYYLANEEEKEELKNIYNLIKSSIDSLEVTNKLIYRKSMLGILKMKELSIFIDNNL YEIVNANFDELIRIIANRLKESEVCKIIPKFVDDSYVYDLLKIWINGKSYIEIWSYAKSV NLLVKRGKRSRDISLEDIITLCDSDFGYASLTIIQAIIEVLNTKDCSENTQENLSDIIYR IRYGLPNKESVFIYELGFADRIISQKIANEISDFDCSTKTKTKSTIKSNREKLRVLLSNY PSYFLDRLQKLR >gi|229269864|gb|GG666047.1| GENE 223 229949 - 230230 362 93 aa, chain - ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 92 35 126 152 142 90.0 3e-33 MANRFRNERIEIKLTKEEKEVFEKKMKLANCKTMSHFLRKCVLEKEIYVVDLEPFRNLQW LLSNATNNINQIAKATNTTGVIYKNEIESMNKS >gi|229269864|gb|GG666047.1| GENE 224 232225 - 232836 533 203 aa, chain + ## HITS:1 COG:no KEGG:FMG_0941 NR:ns ## KEGG: FMG_0941 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 7 203 1 197 197 341 98.0 1e-92 MIGGILLKDKETKVGQIRKKEIRDAAMRCFLNKGFQNTTMEDVIKEVGMSTGGVYHHYKS TAEMLKDLMLDGNQYRNNLIDNYLEAHIGQDKYEQMSEILVDKCLPDTDITKVYSLLLQS KKYNEDLEKMFQDLKTETVNQLDSISNKLGIDSKIFEDGFLVNYINGMILSSQVLNARDS YDENRKYLKDTILNYILDLEKNR >gi|229269864|gb|GG666047.1| GENE 225 232854 - 233435 517 193 aa, chain + ## HITS:1 COG:no KEGG:FMG_0940 NR:ns ## KEGG: FMG_0940 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 193 1 193 193 338 100.0 1e-91 MNKKLEVRDLINVGLFAVLGFIFMLIGSFTAMVPVLMPIVPLVQGILVGPSNMLFSTKIK KPGMLFIQTMLISLAYVIMGHGPWALLTGAIAGFIGEIILKSGSYDSKGKSRLAFSFSSL CTLGNYVPIIISRNEYAQGLLNQGYKQEFIDTMMKVMPDWILIVMAILGFIGAFVGCSLG IVFLKKHFSKIGK >gi|229269864|gb|GG666047.1| GENE 226 233460 - 234161 387 233 aa, chain + ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 58 213 56 210 226 69 35.0 4e-12 MIRIDFRAKLFLMMVISFIMTIGNIQSLNPIYYVLICMLPTFLLFLSGHIKSGIKSIILF IILNIIEINIRELNDSIILSLIHIVIIIIKRVFAPMVMGNYIILTTSVGEAICSLKKVKC PDQIAIPVAVMVRYFYATRIEYRQIKQAIYLRGISFRKFLKNPILLIEYRIIPLLMTLSN SADELTVASLTKGLAVNQNRSNIREAKLTFADYLIFFVSILVLFFYIRGRKYA >gi|229269864|gb|GG666047.1| GENE 227 234154 - 235545 825 463 aa, chain + ## HITS:1 COG:SPy1787 KEGG:ns NR:ns ## COG: SPy1787 COG1122 # Protein_GI_number: 15675626 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 26 462 28 463 464 232 34.0 1e-60 MLKIRKLDLSFDDENILKNLNFECKAGEITVITGHSGCGKSTLLKAINGVIPEYLDANIN GEIKYNSLDLLSKNIFERSCIISNVFQNPKSQFYCMNSTEELAFQLENRNTDKSEIINRI KKYSKLLNIEYLLDKNIFDLSGGEKQMIALAACAISENDIILLDEPSSSLDNESIERLKE ALVKLKELNKIIIVVEHRLFYLKNIMDKLCIIDNGSLNLYEKEDLNDYNLKAIAEGYELR TFNKIEKSDLEINKYYKVNLLDDKNNFSNGDLSCHNFKKKYEKNKIFDFSISFNKGVNFI IGKNGIGKSTFIKLLTGITKGHGDVFVNQKKVTKQNKEIFMVMQDPSSQLFTESVLSEVS TVSEDKSLNEKMLEKMGLLSKLEKHPQSLSGGEKQRLLIAIARLSNKPIIILDEPTSGLC KPQMNTLINFLHDMEREGKLIIIITHDFEFIKHCDGTIYEFLK >gi|229269864|gb|GG666047.1| GENE 228 235581 - 237323 1046 580 aa, chain + ## HITS:1 COG:SA2217 KEGG:ns NR:ns ## COG: SA2217 COG1132 # Protein_GI_number: 15928007 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 9 576 10 579 587 441 41.0 1e-123 MKEKSPAVILWELAYKEHSKLKTSVFIASIGVIAGIVPYIAASRILVYLLNGIADFKVYF LWMGIGLLSYILKSVLYSTALSVSHKATFSVLKDIRLRMIDKLPKMQLGEIISVPSGNFK QIIVDQVESMEKPLAHLLPEMTSNLLGSLSIFIYLLFLDWRMALLSLVSIPVGMLFMGLV MKNYAVQYEGSVKVNREMNSAIIEYVNGIEVIKTFNQDKRSYAKYKDKVIANARYFYEWM KSCQLPVSLSKNISPTTMITVLPFGWYFYISGSLSAEVFISVIILSLGIAGPLLETINFV DGLAKIGTIANSINLILEGKEQKHSDREVTIQQYNIDLQNVKFGYEEEKEILHGISLNIK EGTTVAFVGPSGSGKSTLAKLIAGYWDSMEGNINIGGHNLKEIPLKQLYSLTAFVSQDNF LFNESIRENIRMGNPSASDKEVEDIAKKSGCHDFIMKMEHGYDTVVGSSGSHVSGGERQR ISIARAMLKNAPIVILDEATSYIDPENEVIIKQALSKLIKDKTVIIIAHRLSTITDAEQI FLIENGELVSHGKHEELMEDSELYQKMWNAHIGVKDGEIK >gi|229269864|gb|GG666047.1| GENE 229 237320 - 239053 216 577 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 334 565 2 239 245 87 27 4e-16 MISALKKILDFSGDEKKNVYHSIWVSFLFAIFHMLQISAIYIIVKAIVEKDMSMTPAWIA LILLVISIVGRSVANYYSQLQQCHASYFMVANKRVAIGEMLKKIPMGFFNENNIGEIVGI STTVLEDVENTAAMVMVNTLSGFINTIIFTIMILAFEWRIGLIVTIGCLLYLLILSKMEN KSRNVLPKRQVASAKLVDTILEQIGGMAVIKSFNLTGKGDEKVRDAIENSRKINLDCEKL FTPYTILQNILLDLFSILIIGAGIFFYINGELSFLNTVMTIIISFLAFSQIKLAGSATTS LRVVSGSIEQTKKLEEFPQMDIDGKDIKPTTFDISFDNVEFSYSGKKILDDISVKIPQKQ MTAIVGASGAGKTTFCNLIARFWDVEKGEISIGKHNIKEYSLESLMRQISMVFQNVYLFQ DTIENNIKFAKPDATHEEVIEAAKKACCHEFIMKLPEQYETVIGEGGASLSGGERQRISI ARAMIKNAPIIIFDEATANVDPENEDKLQIAMEELTRDKTVIMIAHRLKTIKNANQILVL ANGKITQQGTHEELIQVDGIYKKFVEARQVAAKWQLS >gi|229269864|gb|GG666047.1| GENE 230 239090 - 240439 1044 449 aa, chain + ## HITS:1 COG:MA1121 KEGG:ns NR:ns ## COG: MA1121 COG0534 # Protein_GI_number: 20089987 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 7 448 11 457 475 203 31.0 5e-52 MGKQDMKTQLLTKSPKELLFKLAIPGIIGMIVIGLYPFMDGVFAGWLIGDYAMSAISVSM SLTIINGGISALIGVGSASILSRAIGKGDKETTDKIFGNFCYWVIFFSVIITILGLVFAP HFLDLVGAKGNIKELGVRYLRIVFFGSIFVNFAQAGNMTMRGEGALKQSMMIMGAGAILN IILDPIFMKLMGEYAIEGAAIATVISQIVQAILTFHYFSKKSAFVGIHKIQKYKAIYSEM FSIGSSAMMMQILFAVQQTFLFKQAFAYGGDDWGILMSATMRLYMFSFIPLWGMSQGLQP VIGANFGAKQYGRVKDTMKIFMYGATILAAASWIPSMFCSEKLLSLFSVRREIIEVGVVN FKMFYSTFILYGIMIMTLTFFQSIGDGKKAGMIVMLRQLVLFIPAILLFPKAFGASAVWW TEPIVDFSMIMLGLFLMLNGLRKMGKDKA >gi|229269864|gb|GG666047.1| GENE 231 240759 - 241169 474 136 aa, chain + ## HITS:1 COG:no KEGG:FMG_0934 NR:ns ## KEGG: FMG_0934 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 136 1 136 136 190 93.0 2e-47 MAKEYYLYVRGQKVKVSEDIYKVYWREKEHEKYLEQVDKKNHLLFFSSLNHDGNFEDNLE DKNVDVEKVVATQMMIEALRNAMSKLNKDEREIIERLYFNDETLRAVSKTQNISHTALIK RRDKILEKLKKFIEEI >gi|229269864|gb|GG666047.1| GENE 232 241605 - 241814 238 69 aa, chain + ## HITS:1 COG:no KEGG:FMG_0933 NR:ns ## KEGG: FMG_0933 # Name: not_defined # Def: putative transposon excisionase # Organism: F.magna # Pathway: not_defined # 1 69 21 89 89 117 98.0 1e-25 MINENIKGVRVCEKAFLTLKEASEYFNIGQDKVRQLTDENDCDFVLFNGSKRLIKKKLME EYLNRQFSI >gi|229269864|gb|GG666047.1| GENE 233 241892 - 243127 833 411 aa, chain + ## HITS:1 COG:SPy2122 KEGG:ns NR:ns ## COG: SPy2122 COG0582 # Protein_GI_number: 15675872 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 13 407 1 378 381 94 26.0 3e-19 MVKRRKDSKGVVLKDGEYQRSNGTYEFKWQDKIGRRKSIYAKTLKELREKELDILRNTID GINNEGSSLSVNDTFKLWTKVKRGLKDNTFKNYIYMYQQFVEPTFGRIKLSDIKRSDVRS FYNRLKEDQGLMVSTIDCVHTVLHQVLELAVDDEYIRFNPSDNALKELKVAYRNESLKKK AMTIEEQVLFEEYLSNSDEYKKWYPIFIVMLWTGMRVGEVTGLQWDDLDFDNGLINVNRT LVYYSKGKGLNNRYAINTPKTVSGKRSIPMVQKVKDAFLMERELQKTFGIECCDSIDGFK DFVFLNRFGKVHNNGTLNKALRRIVRDCNLSIMDKNKSSSNDILLVPHLSNHIFRHTFTT RLNEQNINTKAMQSILGHSDISTTMDIYVDATEDFKIEQMGEFEKAMKFIF >gi|229269864|gb|GG666047.1| GENE 234 243284 - 243730 736 148 aa, chain + ## HITS:1 COG:VC1036_2 KEGG:ns NR:ns ## COG: VC1036_2 COG0073 # Protein_GI_number: 15641049 # Func_class: R General function prediction only # Function: EMAP domain # Organism: Vibrio cholerae # 38 122 3 86 109 82 51.0 3e-16 MKPLGLEKKDHDKQKVASLDEDEAVDFSKVVVEPIYEDIDFETFSKSDFRAVKVLACEEV PKSKKLLKFTLNDGSGKERTILSGIKEYYNAEDLVGKTLLAIVNLPPRKMMGIDSEGMII SAIHEEEGEEKLNLVILSNRIPAGAKMY >gi|229269864|gb|GG666047.1| GENE 235 244023 - 244241 333 72 aa, chain + ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 71 1 71 72 131 95.0 4e-31 MALNYKPLWIQLAKKGLKKTDVIAMAGLTTNVMAQMGKDKPITFKNLERICKALSCTPND IISFEDEFEKEI >gi|229269864|gb|GG666047.1| GENE 236 244669 - 245163 178 164 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486817|ref|ZP_03917133.1| ## NR: gi|227486817|ref|ZP_03917133.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 164 1 164 164 260 100.0 2e-68 MKTLGMLTIICLTASIMMVNFILIIPKFGSKHFGAPDDIKVMMSKLPDKPIWINIIGGLI MILGLLAIAAVLGWAIVDTVKFSLTFQQAFVRFLILFEGYKLFDIIFFDYLMLTKLKLPT KVYPETVGAKGYDNFGFNGKSQIAKIIIFFFVSLILAYLLTVLV >gi|229269864|gb|GG666047.1| GENE 237 245504 - 245932 538 142 aa, chain - ## HITS:1 COG:FN1079 KEGG:ns NR:ns ## COG: FN1079 COG0783 # Protein_GI_number: 19704414 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Fusobacterium nucleatum # 4 142 7 144 144 122 48.0 3e-28 MTKLNTYLANLAVLNIKIHNLHWNIVGSQFVSVHEYLESEYDKAGERLDEVAELIRMSGE FPVANLKEYLEISTIKEIETSKEVSIKEALEIVLSDIKLQKELALEIRKEANEADNFPVA NVMEDHIEDYNKQIWFVESSLK >gi|229269864|gb|GG666047.1| GENE 238 246220 - 246546 345 108 aa, chain + ## HITS:1 COG:no KEGG:M28_Spy1086 NR:ns ## KEGG: M28_Spy1086 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS6180 # Pathway: not_defined # 13 108 1 96 96 85 85.0 6e-16 MLSPFITRKEISIKKLDQIRQESKEIKEKIDDTEERLMQLKNQEKKILKQDIVRRRKERT HRLITRRPILESLIENAEELTEEEIKILLEEAKKTKQFKETLKIMSEN >gi|229269864|gb|GG666047.1| GENE 239 246949 - 247365 202 138 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227500047|ref|ZP_03930118.1| ## NR: gi|227500047|ref|ZP_03930118.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] # 1 138 1 138 138 235 97.0 1e-60 MKNKVSIREVVATKIIIAILIAGYYWLWSRSDYQPEYQQFSSYWGFILFLILIVHYFRVK KYKKEYFDEFAEKNLHRCDSICLKIFGVLMVIIAYLGGILGHVNGISTALMGWLIIGTVI TITILRTIMFIIMDSKGV >gi|229269864|gb|GG666047.1| GENE 240 247368 - 247571 165 67 aa, chain + ## HITS:1 COG:AF1793 KEGG:ns NR:ns ## COG: AF1793 COG1476 # Protein_GI_number: 11499382 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Archaeoglobus fulgidus # 5 67 3 65 70 68 58.0 2e-12 MALITKVKEYREKKKYKQSELAEMVNVRRETIVHLENGKYNPSLKLAMDIAKVFDVSVED LFEFTDD >gi|229269864|gb|GG666047.1| GENE 241 247601 - 248026 481 141 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486823|ref|ZP_03917139.1| ## NR: gi|227486823|ref|ZP_03917139.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 141 1 141 141 250 100.0 2e-65 MQFTGLQWDDIDFDTVEDLDKYDRKKYLAPISVINLKKTPGKTTSNDSEIDKFAKDDREF IKNQVEIYRPDFIICGGTGDIFIKNNLNLDISSWTYVSDYLSYLIYNDTIIVKTYHPAYR KSKKDLFENIVSPIRDILNNK >gi|229269864|gb|GG666047.1| GENE 242 248946 - 249596 541 216 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0528 NR:ns ## KEGG: HMPREF0868_0528 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 17 169 2 157 163 216 78.0 4e-55 MLYDDLIFKTKRRTLKGMIANYQSTTDIELEKFTCLDDVEEAQEDVNVEICDIDKIWDAL HFLLTGKSASEPIEDDVISEAIVGQFNIYEEDYIVGTKSDRVKEIAKALQEIDFEAYLNE FEMSAFRQKEIYPNIWEYEEEADEIKDELRDSFESLKKFYEKIAEQEKAEEWRKAWADIT NKYLEENNIQEKVDHRSFQRQGIKQIPTIHLGVSAS >gi|229269864|gb|GG666047.1| GENE 243 249597 - 249794 172 65 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1341 NR:ns ## KEGG: SDEG_1341 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 49 238 286 494 67 73.0 2e-10 MEKKGITTDRGNINREIKHQNAILREIKRRIKALLNWIRGIGKEEKQKTRIQSPPPIQRK FAVRF >gi|229269864|gb|GG666047.1| GENE 244 249778 - 250344 70 188 aa, chain + ## HITS:1 COG:no KEGG:SDEG_1341 NR:ns ## KEGG: SDEG_1341 # Name: not_defined # Def: hypothetical protein # Organism: S.dysgalactiae # Pathway: not_defined # 1 188 307 494 494 211 71.0 1e-53 MLSVFENLIRKNAYNHNTDLEKYIESYQFLKKKNITSISELKESIVTLRDKNYKTTRAIK GTEKKIDDRVQLIDQAQKYLKHRDTYKACVKLRKNKQDTFYNEHTAEIILFESAKKYLKE HLGEKKTLNISKWKSEIGTLRKEKGILYSQMTDIRKEVEQAESVRGCIDKLLQEKRGLTQ EKKKELEV >gi|229269864|gb|GG666047.1| GENE 245 250592 - 250981 328 129 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486828|ref|ZP_03917144.1| ## NR: gi|227486828|ref|ZP_03917144.1| hypothetical protein HMPREF0072_2231 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_2231 [Anaerococcus lactolyticus ATCC 51172] # 1 129 1 129 129 184 100.0 2e-45 MIFGAFVAFLISGVIGGYKVAIIISSIIIILVVISIFRQLRTKIIINGNGLLINDGKKEF NYNLNEVYISSEQRNNDSFFLYLYTEDGNKEMFDLSSLGKRKYNELIEDLGVVGVKSKTI KLNDVNKNN >gi|229269864|gb|GG666047.1| GENE 246 250996 - 251439 524 147 aa, chain + ## HITS:1 COG:no KEGG:TDE1585 NR:ns ## KEGG: TDE1585 # Name: not_defined # Def: hypothetical protein # Organism: T.denticola # Pathway: not_defined # 13 142 13 149 155 78 34.0 7e-14 MEKYLEEFFSMGVYAYVVIAIFILAAVFSFVSIKMNKNALTKWLAVHPNAVKIELSSGNN VITQKQLYARVISGEAAIFNEKAKYIVCADPGDIVLEVTYTYTRPGVLHKNVTTTWGPAK VEFNVERGKDYLLSFDKKEEQFKLSSK Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:45:06 2011 Seq name: gi|229269863|gb|GG666048.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD5, whole genome shotgun sequence Length of sequence - 17505 bp Number of predicted genes - 19, with homology - 19 Number of transcription units - 9, operones - 6 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 3 - 300 68 ## gi|313888375|ref|ZP_07822043.1| helicase C-terminal domain protein 2 1 Op 2 . - CDS 246 - 1553 1117 ## SEQ_1253 conjugative transposon DNA recombination protein - Prom 1793 - 1852 6.3 3 2 Tu 1 . - CDS 2193 - 2357 245 ## gi|303233580|ref|ZP_07320238.1| helicase C-terminal domain protein - Prom 2405 - 2464 9.7 4 3 Tu 1 . - CDS 2585 - 3112 426 ## gi|227484703|ref|ZP_03915019.1| conserved hypothetical protein - Prom 3243 - 3302 8.3 - Term 3118 - 3152 3.2 5 4 Op 1 1/0.000 - CDS 3392 - 4702 1039 ## COG0550 Topoisomerase IA 6 4 Op 2 . - CDS 4671 - 5099 299 ## COG0550 Topoisomerase IA - Prom 5292 - 5351 59.4 - Term 5274 - 5341 17.6 7 5 Op 1 . - CDS 5353 - 6081 524 ## SEQ_1257 abortive infection protein 8 5 Op 2 . - CDS 6074 - 6667 334 ## SEQ_1258 conjugative transposon hypothetical protein - Prom 6693 - 6752 7.4 9 6 Tu 1 . - CDS 6980 - 7378 485 ## SPAP_0884 hypothetical protein 10 7 Op 1 . - CDS 8349 - 9107 553 ## FMG_0958 putative chimeric erythrocyte-binding protein 11 7 Op 2 . - CDS 9104 - 9361 279 ## gi|227484711|ref|ZP_03915027.1| conserved hypothetical protein 12 7 Op 3 . - CDS 9379 - 12000 1355 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 12231 - 12290 80.4 13 8 Op 1 . - CDS 12541 - 13506 758 ## COG0863 DNA modification methylase 14 8 Op 2 . - CDS 13478 - 15076 904 ## COG3451 Type IV secretory pathway, VirB4 components 15 8 Op 3 . - CDS 15146 - 15865 430 ## SEQ_1263 conjugal transfer protein - Prom 15885 - 15944 2.8 16 9 Op 1 . - CDS 15966 - 16304 322 ## SEQ_1264 conjugative transposon membrane protein 17 9 Op 2 . - CDS 16304 - 16561 229 ## gi|303233581|ref|ZP_07320239.1| conserved domain protein 18 9 Op 3 . - CDS 16579 - 16866 142 ## CD1853 putative conjugative transposon membrane protein 19 9 Op 4 . - CDS 16808 - 17443 466 ## CD1853 putative conjugative transposon membrane protein Predicted protein(s) >gi|229269863|gb|GG666048.1| GENE 1 3 - 300 68 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313888375|ref|ZP_07822043.1| ## NR: gi|313888375|ref|ZP_07822043.1| helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] helicase C-terminal domain protein [Peptoniphilus harei ACS-146-V-Sch2b] # 3 99 763 859 3466 167 100.0 3e-40 MVNVARKINDLIKKNRYIDEESFEENREKKTDQEINKTEKESQEYINYQDDLPPTDNDVY IERTNNSSIYYYQGQSVASIGDDGKLIIYDEFIPNFLKE >gi|229269863|gb|GG666048.1| GENE 2 246 - 1553 1117 435 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 5 431 681 1125 3975 317 42.0 6e-85 MGKDEIELSQGEQRRGLSDNVFARDIDGSSSIKGKRDRGLYHEGRSQNDGNLGSDRRTER RGLSEISEVEEEHGYDPTRNRGKGDNLNLKKEEVESTSFFSAKNQGEQISFSNPISQREI DTFLIHGGNHEDGRLAVIAEFSKGKSLEEQANFLKEIYKGANGFEIEGRKISAWFGKEGA IFKDGDEARYREGQIVSWKDLANNINDLLNRGEFASNVEVIESATYEREKIAEKLLYLKR DLTDETKDRYLSSLNDIKGRGFPDEKENLGKKLEDKNFINKLRKEYEVFLEEYKINPDIL RFHHYKLSTIYNDINDLEIERKLYRSNLKDIAPIQSFITQDEIDESLKRGSGFSDGKKRI YEFFTEKHDLKEQADFLKNEYGVGGSSHALSAARESGEWHDAKGIKYNKGNAKEILLSWS MLQEKLMTLLKRIDI >gi|229269863|gb|GG666048.1| GENE 3 2193 - 2357 245 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|303233580|ref|ZP_07320238.1| ## NR: gi|303233580|ref|ZP_07320238.1| helicase C-terminal domain protein [Finegoldia magna BVS033A4] helicase C-terminal domain protein [Finegoldia magna BVS033A4] # 1 52 1 52 3641 99 98.0 1e-19 MPRYDIVDLSRTIYLAKEEFKKDIKKYEEYLKVSGNNYKYPYIHQISIYNMEAS >gi|229269863|gb|GG666048.1| GENE 4 2585 - 3112 426 175 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484703|ref|ZP_03915019.1| ## NR: gi|227484703|ref|ZP_03915019.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 175 1 175 175 301 100.0 2e-80 MVEVIKYGFYTVNSDYLEYLNKVDSEVYYNPSYRNSIKPFVGIIVGIENYNYFIPISSAK EKHKKCKNVSDEHFLIYEVIDNSITIDGDIYKYYSDKEKMHILSILDIKKMIPVPTDGYE RIDFNELEDIRYKDLFQKEYAFCLKIKTKILIKVEKIYKNQKNTGIIRRANCNFF >gi|229269863|gb|GG666048.1| GENE 5 3392 - 4702 1039 436 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 436 135 596 709 286 43.0 8e-77 MEDSSIKEGFSNLKDGSNYDNLFDSAKARAIADWLVGMNISRLYSCLYNENYSVGRVQTP TLSMIVNRDYEINSFKKEKYYTVEISMNGLTLSTDRIDDKIVAEQLKNLIEERIEITDVI KKENITKPNLPLDLTTLQRECNKYFGYSAKQTLDYAQSLYEKKYITYPRTDSRYLTVDMI ESTVNNIIGKNDFDTERIKVVFNSEKVTDHHAIIPTISSLNKDISNLPESEAKVYRLITN KLYASFGYPLVENTTKIVAEFDGFEFINTYKIIAEEGFTKYLEEYKSKKKEDIQLPDVKI GDFLYIENKDIKEKYTKPPKHFTEDTLLKAMEIAGNDELVKDVEVERKGLGTPATRAVII ENLIYKGYIKREKKNLISTRKGLNLVTIVIDEFKSPKTTAKWEMRLSDIAKGKEDKENFL KEIEEEIKNTIGKYYK >gi|229269863|gb|GG666048.1| GENE 6 4671 - 5099 299 142 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 123 5 125 709 133 56.0 8e-32 MKLVIAEKPSVAASIAKVIGAKNRNNGYYEGNGYIVSWCVGHLVQMANPDVYDERYKKWR IEDLPIIPKEYKYEVTKTTKKQFNILKRLMNSNEVDTIINACDAGREGEAIFRLVYIMAN CKKENETSLDFLNGRFFHKRRI >gi|229269863|gb|GG666048.1| GENE 7 5353 - 6081 524 242 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1257 NR:ns ## KEGG: SEQ_1257 # Name: not_defined # Def: abortive infection protein # Organism: S.equi_equi # Pathway: not_defined # 1 238 1 238 280 355 76.0 7e-97 MNKAKLTVICHNISKESGLPFNSVMLYYFLESILKKLAQSKYHEKFIFKGGFLLSNVVGI DSRSTVDIDFLLRNMHLSEENVLKTIQESLEASYSDDISYKVHGISKIKEDDQYGGFRVS ILCRMENIRQIVPLDIATGDVITPHPIDYKYISAFGQEDILIKAYPIETIVAEKIQTIYS RGFLNSRSKDYYDLYVIYKLKDKEVDTKILKEACIRTFDYRKTEFDIDKIISLMRVLKTL AS >gi|229269863|gb|GG666048.1| GENE 8 6074 - 6667 334 197 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1258 NR:ns ## KEGG: SEQ_1258 # Name: not_defined # Def: conjugative transposon hypothetical protein # Organism: S.equi_equi # Pathway: not_defined # 1 197 1 197 197 266 74.0 5e-70 MNYRKQIEIHLKKSGGIITSAYCRENNIPTVYLSRLAKEGKLFRVQKGIYIIEESDYDDY YFFQYQYRKAIFSYETALFLLGVTDKIPWRIDVTVYNGYKFNEKQDTLNINYVKKSIYNL GIIQKKTMFGNIVNVYSYERILCDFIYNKEKMDTEVYVKLIRSYSKYKDKDIHSLYEIAR KMGIEDKVKEVMEVVYE >gi|229269863|gb|GG666048.1| GENE 9 6980 - 7378 485 132 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0884 NR:ns ## KEGG: SPAP_0884 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 92 156 248 288 88 67.0 8e-17 MHLIVDHSSNQDNVRLLTEVGEQDLLNMIEGESEAKPKEEVVKKEEPVEEKPKKEEKEEK KSGIGLYLFMGLIIVGVMGAGYYFKIYKKNEEASFEDEQDYNELEDDYESEGEDYNLEDK EDTEVIPDEDEF >gi|229269863|gb|GG666048.1| GENE 10 8349 - 9107 553 252 aa, chain - ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 249 1 248 783 424 88.0 1e-117 MKKITSGILAVMMLLVSLVNIVAVSPVYAKTDDKVEWTEDDFMYSSEGNIIAFSDKGLEK KEKTNILVFPEGTKSINGNYSLSHSNDELRYKREFGRGKHWDKVIIPDSVKHLGYAAFYD ASIDEVKLSNSLTYLGGLAFFNCGLREVTLPDTLVNIEHNAFERNNLQEITIPKSVKTIE QYAFSRNKLHTIKVLGNPNINSKGVFHNQEVEYRPKQNPFYENHFGFNGNQGFKSIPNGL RFENGEFVLIRM >gi|229269863|gb|GG666048.1| GENE 11 9104 - 9361 279 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484711|ref|ZP_03915027.1| ## NR: gi|227484711|ref|ZP_03915027.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 85 1 85 85 79 100.0 9e-14 MNKKLIRNIEKQKNLRKKKEEIEIELQLLAEEQEEIENLEVIKEFRSRKISLDEFLFIVR KNKEEENRERQELKRKYTNESEENL >gi|229269863|gb|GG666048.1| GENE 12 9379 - 12000 1355 873 aa, chain - ## HITS:1 COG:BS_yddH_2 KEGG:ns NR:ns ## COG: BS_yddH_2 COG0791 # Protein_GI_number: 16077564 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Bacillus subtilis # 752 873 5 124 124 102 45.0 4e-21 MEENEESRYGEYHGQETEYRLSNFKEDFNNGVISTNSNIKSSISPQKNCKGNSNLKLKKN VESESFNDVPDKKIRRFRKEDKNFNIEVSSTYDPLSQDSDNDGVIDRYDMNFSDSNVSYR DTRDDYKYLPSSDVQRKNWDGYSILGKKGKESFQKNTLKKLYQSQSQFKDKGEKAELKSL NGKFRRKDLSYKANEEDKKIIQDLNTNKKQNSKYFKGKVRNLEEKDMLMGRVSSEKFRQG SLSEGFKSESEKNKDKYNINKKNQEKIGTKKEIFKQEKNVIKNENLEVDELDLNISGISN KNKGKKRQIKDAFDNTIKKSNFDPKKEYTRTKKEVQDSKNVSEENKVDTKNKTKFHSKKD NKSEKDKFYKKEDKISKLYEKKNKKEKELIKDKKKSKKAGIEKPIIFASAMTANYLYSGK DDNAGVNAAYKLSRTTEAIGREISHFRRKKPLKTQRKIKSLEGKIYKKESKLLFQRNFEE LKKTKNYQNSNKLNRFFMKKKFQRDFRKKHGEGLVNRIKKSFANIGKKTLEVLKNKGYKQ ILIALCILGLFFMLFQGISNVGSLTSGLTSNVIATSYLSKEEVLMDINNEFTSYEYALQD EIDSIKENYPNYDEYHIKGDSVGHDLHELFSYLTARYGEIKSAEEIQKELKKLFNQMYEK KYTSKSITKYDSEGNPYTYRILTLTIKKKSIDEIAREEFANYETNMAHYLALLDSQGNMS GYFGSSYGNLGEIIDNPNFGNPGIEFDDITVKQLFSEAEKHIGKRYVFGASGPSNFDCSG FVCWSYTKSGVKRMPRTTAWQIYKNYCNPISPSEAKPGDIIFFKGTYNSGTPISHVGIYA GNGMMLHAGDPIQYTSINSRYWKNHFYSFGRPK >gi|229269863|gb|GG666048.1| GENE 13 12541 - 13506 758 321 aa, chain - ## HITS:1 COG:XF0641 KEGG:ns NR:ns ## COG: XF0641 COG0863 # Protein_GI_number: 15837243 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Xylella fastidiosa 9a5c # 4 317 43 377 380 146 27.0 6e-35 MIDREKLKTNYIINLDAISALKEFPDKTFDCCITSPPYYGLRDYKAEGQIGREESPEEYL NKLIEVFREVKRVLKKEGTLWIVIGDSYAGTRSKKEYKDPKNIEGRSGQKESITEKLSGY KAKDLMGIPWQLALKLREDGWYLRSDIIWHKENAMPESCRDRPSRSYEHIFLLSKARKYF YNFDAMKEPIKEISKKRYMRARGNNNKYLQEGTGAKRQSINEAREYGEYIGDNVPKFRNN RDIWTINTSAFKGKHYAVFPPKLVELCIKAGCPKKGLILDPFMGSGTVGMVAIRMDREYI GIDINKDYCQIAKERIEKNMK >gi|229269863|gb|GG666048.1| GENE 14 13478 - 15076 904 532 aa, chain - ## HITS:1 COG:CAC2047 KEGG:ns NR:ns ## COG: CAC2047 COG3451 # Protein_GI_number: 15895317 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Clostridium acetobutylicum # 5 495 70 600 617 100 22.0 6e-21 MIVTFHINSIDQTEAIKMIKRKITDLDKMKIEENKKAIRSGYDIDILPSDLITYGNDAKK LLVELQNHNERMFVITILFTNMEKSRKKLSNIIFQLNSIAGRHNCVLKNLNYRQEQGLIS SLPLGKNEIEIKRGLTTSSTAVFIPFTTEELCLEGESLYYGLNALSRNIIMTDRKLLKNP NGLILGTPGSGKSFSAKREITNAFLITQDDIIICDPEGEYGNLTKALGGEVIKISPTSKD YINPLDINVDYADEDNPLSLKSDFILSLFELVVGKEGLSAEETSVIDRCLPILYKNYFDN PIPENMPILEDLYNLLLKQEEKVGKKLAVEMEIYVKGSLNVFNHRTNVDTGNRILCYDIK ELGKQLRKIGMLIVQDQVWNRVTINRNKKETRYYCDEFHLLLREEQTASYSIEIWKRFRK WGGIPTGLTQNVKDLLASPEIENIFDNTDFILMLNQASGDREILANKLNISLYQLSYVTN SNEGEGLLFYGNTIVPFVDRFPKDTKLYKLMTTKPEELKEGIEIDRQREVKN >gi|229269863|gb|GG666048.1| GENE 15 15146 - 15865 430 239 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1263 NR:ns ## KEGG: SEQ_1263 # Name: not_defined # Def: conjugal transfer protein # Organism: S.equi_equi # Pathway: not_defined # 19 232 39 252 808 285 69.0 1e-75 MKKANISKEKGKPKKKLSFFGGKKKKSVQETIPYLRMLRNGICQVEKNKFNKMIRFLDIN YQLSTEEDKESIFNEFSSFLNYFDPSVDIELSYINRIGKNEEVEKNINVPDRNDSYNEIR KEYREMLKNQSQKGNNGLTKYMYITFSLQAQDLKEATTRLERMEMDILNNFKQMGVKAYV LSGYERLKVIHDILNPNKNFVFSFEDLKYSGLSTKDYIVPASFNFSSTINLKLENTLEK >gi|229269863|gb|GG666048.1| GENE 16 15966 - 16304 322 112 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1264 NR:ns ## KEGG: SEQ_1264 # Name: not_defined # Def: conjugative transposon membrane protein # Organism: S.equi_equi # Pathway: not_defined # 1 109 1 109 136 120 59.0 2e-26 MAYVNVPKDLTKVKTKVALNLTKRQLIGFTIAGLIGFPVYLMVKKVLPNDLSMLIMIGVS FPIIFATLYEKDGIYFEKYLKYIIDKKRQTSIRIYKTECIYDIKKQRKERSK >gi|229269863|gb|GG666048.1| GENE 17 16304 - 16561 229 85 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|303233581|ref|ZP_07320239.1| ## NR: gi|303233581|ref|ZP_07320239.1| conserved domain protein [Finegoldia magna BVS033A4] conserved domain protein [Finegoldia magna BVS033A4] # 1 85 1 85 85 128 96.0 1e-28 MKIRRKKDKKINLKTLGTIGLPILLIGGYITREIQNRMIIRKRLEVLDNREETNEKVLEI AVNMGKSLEDLNREDIYGFYLEGLE >gi|229269863|gb|GG666048.1| GENE 18 16579 - 16866 142 95 aa, chain - ## HITS:1 COG:no KEGG:CD1853 NR:ns ## KEGG: CD1853 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 95 193 287 287 138 73.0 7e-32 MIEIYIYTSVCAIPFATMGNKEWGSIGTNYIRGLFALGLQGLFLLICVGIYAVLVKTLNI SDIHKSIFELLGYTLILGITMMKSGSIAKSILNAH >gi|229269863|gb|GG666048.1| GENE 19 16808 - 17443 466 211 aa, chain - ## HITS:1 COG:no KEGG:CD1853 NR:ns ## KEGG: CD1853 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 184 1 184 287 237 68.0 2e-61 MFNIVDKIKEFFSEILIDMIKENLSGMLLDINDKVSTIANEVGKTPSGWNSEVFHFIKSI SENVILPIAGLIITAVLCIELIQMVMNKNNMHDTDTFDFFKYMIKMWIAVWLVSHAFDFS MAVFDVAQNLIGKAAGVANASAKVSPGDIANMVDSLKGESIGKLMTIVLETAIVKMIIQG ISILNYSYSIRQDDRNIYLYFSLCHTFCHNG Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:47:05 2011 Seq name: gi|229269862|gb|GG666049.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD6, whole genome shotgun sequence Length of sequence - 179912 bp Number of predicted genes - 185, with homology - 180 Number of transcription units - 70, operones - 39 average op.length - 3.9 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 21 - 80 2.9 1 1 Tu 1 . + CDS 105 - 2966 3236 ## COG1026 Predicted Zn-dependent peptidases, insulinase-like + Prom 2973 - 3032 9.1 2 2 Op 1 . + CDS 3064 - 4155 922 ## Apre_0196 hypothetical protein 3 2 Op 2 . + CDS 4148 - 5263 1592 ## COG3853 Uncharacterized protein involved in tellurite resistance 4 3 Tu 1 . + CDS 5605 - 5886 412 ## Apre_0194 hypothetical protein + Term 5896 - 5927 1.0 5 4 Op 1 . - CDS 6940 - 7338 475 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 6 4 Op 2 . - CDS 7351 - 8253 772 ## SZO_15210 lipoprotein - Prom 8418 - 8477 8.1 + Prom 8384 - 8443 9.8 7 5 Op 1 . + CDS 8475 - 9773 1611 ## gi|227485863|ref|ZP_03916179.1| hypothetical protein HMPREF0072_1266 + Term 9782 - 9810 1.0 + Prom 9794 - 9853 4.3 8 5 Op 2 . + CDS 9884 - 10732 1071 ## gi|227485864|ref|ZP_03916180.1| conserved hypothetical protein + Term 10739 - 10767 1.0 - Term 10903 - 10959 8.0 9 6 Tu 1 . - CDS 11199 - 11402 206 ## gi|227485866|ref|ZP_03916182.1| hypothetical protein HMPREF0072_1269 - Prom 11424 - 11483 6.6 - Term 11519 - 11553 4.3 10 7 Op 1 . - CDS 11564 - 12094 907 ## FMG_P0070 hypothetical protein 11 7 Op 2 . - CDS 12162 - 12455 429 ## gi|227485868|ref|ZP_03916184.1| hypothetical protein HMPREF0072_1271 - Prom 12502 - 12561 8.7 - Term 12553 - 12621 17.6 12 8 Op 1 . - CDS 12632 - 13033 453 ## gi|227485869|ref|ZP_03916185.1| hypothetical protein HMPREF0072_1272 13 8 Op 2 . - CDS 13046 - 14548 1242 ## COG1705 Muramidase (flagellum-specific) 14 8 Op 3 . - CDS 14557 - 14946 253 ## gi|227485871|ref|ZP_03916187.1| conserved hypothetical protein 15 8 Op 4 . - CDS 14921 - 15232 276 ## gi|227485872|ref|ZP_03916188.1| hypothetical protein HMPREF0072_1275 16 8 Op 5 . - CDS 15243 - 15386 91 ## gi|227485873|ref|ZP_03916189.1| hypothetical protein HMPREF0072_1276 17 8 Op 6 . - CDS 15386 - 15607 284 ## gi|227485874|ref|ZP_03916190.1| hypothetical protein HMPREF0072_1277 18 8 Op 7 . - CDS 15622 - 17343 1589 ## Sgly_0562 hypothetical protein 19 8 Op 8 . - CDS 17324 - 18442 815 ## COG3344 Retron-type reverse transcriptase - Prom 18469 - 18528 2.9 20 9 Op 1 . - CDS 18720 - 19112 183 ## gi|227485877|ref|ZP_03916193.1| hypothetical protein HMPREF0072_1280 21 9 Op 2 . - CDS 19096 - 19350 375 ## gi|227485878|ref|ZP_03916194.1| hypothetical protein HMPREF0072_1281 22 9 Op 3 3/0.000 - CDS 19353 - 20213 1094 ## COG5301 Phage-related tail fibre protein 23 9 Op 4 4/0.000 - CDS 20230 - 20964 600 ## COG4385 Bacteriophage P2-related tail formation protein 24 9 Op 5 . - CDS 20957 - 22084 985 ## COG3948 Phage-related baseplate assembly protein 25 9 Op 6 . - CDS 22077 - 22394 170 ## Amico_1105 gpW/GP25 family protein 26 9 Op 7 . - CDS 22405 - 22797 194 ## Dred_1218 hypothetical protein 27 9 Op 8 . - CDS 22813 - 23217 470 ## gi|227485884|ref|ZP_03916200.1| hypothetical protein HMPREF0072_1287 28 9 Op 9 . - CDS 23220 - 24260 1187 ## COG3500 Phage protein D 29 9 Op 10 . - CDS 24257 - 24472 143 ## gi|227485886|ref|ZP_03916202.1| conserved hypothetical protein 30 9 Op 11 . - CDS 24476 - 27130 2542 ## COG5412 Phage-related protein - Prom 27207 - 27266 3.8 31 10 Tu 1 . - CDS 27282 - 27659 312 ## DaAHT2_2058 hypothetical protein - Term 27671 - 27719 10.3 32 11 Op 1 . - CDS 27726 - 28241 635 ## Dred_1213 phage major tail tube protein 33 11 Op 2 . - CDS 28253 - 29677 1333 ## COG3497 Phage tail sheath protein FI 34 11 Op 3 . - CDS 29677 - 30006 400 ## gi|227485891|ref|ZP_03916207.1| hypothetical protein HMPREF0072_1294 35 11 Op 4 . - CDS 29996 - 30481 529 ## gi|227485892|ref|ZP_03916208.1| conserved hypothetical protein 36 11 Op 5 . - CDS 30481 - 31038 611 ## Dred_1209 hypothetical protein 37 11 Op 6 . - CDS 31042 - 31377 329 ## gi|227485894|ref|ZP_03916210.1| conserved hypothetical protein 38 11 Op 7 . - CDS 31377 - 32423 1176 ## CLH_1724 hypothetical protein 39 11 Op 8 . - CDS 32435 - 32752 510 ## gi|227485896|ref|ZP_03916212.1| conserved hypothetical protein 40 11 Op 9 4/0.000 - CDS 32768 - 33910 1263 ## COG0740 Protease subunit of ATP-dependent Clp proteases 41 11 Op 10 . - CDS 33891 - 35444 1249 ## COG5511 Bacteriophage capsid protein 42 11 Op 11 . - CDS 35459 - 35707 301 ## CLH_1728 hypothetical protein 43 11 Op 12 . - CDS 35754 - 36698 710 ## MGAS10270_Spy0567 phage protein 44 11 Op 13 . - CDS 36711 - 38348 1155 ## COG5525 Bacteriophage tail assembly protein - Prom 38439 - 38498 2.2 45 12 Op 1 . - CDS 38512 - 39033 504 ## Dred_1202 hypothetical protein - Prom 39058 - 39117 5.0 46 12 Op 2 . - CDS 39218 - 39964 574 ## COG5484 Uncharacterized conserved protein - Prom 40036 - 40095 10.9 - Term 40043 - 40080 3.1 47 13 Op 1 . - CDS 40173 - 40628 146 ## gi|227485905|ref|ZP_03916221.1| hypothetical protein HMPREF0072_1308 48 13 Op 2 . - CDS 40659 - 40868 269 ## gi|227485906|ref|ZP_03916222.1| hypothetical protein HMPREF0072_1309 49 13 Op 3 . - CDS 40861 - 41385 655 ## ELI_3127 prophage LambdaCh01 - Prom 41454 - 41513 5.5 50 14 Tu 1 . - CDS 41519 - 42337 455 ## CLL_A2281 hypothetical protein - Prom 42365 - 42424 4.6 51 15 Op 1 . - CDS 42561 - 43016 489 ## gi|227485909|ref|ZP_03916225.1| hypothetical protein HMPREF0072_1312 52 15 Op 2 . - CDS 43001 - 43534 680 ## gi|227485910|ref|ZP_03916226.1| hypothetical protein HMPREF0072_1313 53 15 Op 3 . - CDS 43551 - 44366 833 ## MCCL_0956 hypothetical protein 54 15 Op 4 . - CDS 44354 - 44650 319 ## gi|227485912|ref|ZP_03916228.1| hypothetical protein HMPREF0072_1315 55 16 Op 1 . - CDS 44816 - 45172 432 ## gi|227485914|ref|ZP_03916230.1| conserved hypothetical protein 56 16 Op 2 . - CDS 45159 - 45377 160 ## gi|227485915|ref|ZP_03916231.1| hypothetical protein HMPREF0072_1318 57 16 Op 3 . - CDS 45367 - 45609 289 ## gi|227485916|ref|ZP_03916232.1| hypothetical protein HMPREF0072_1319 58 16 Op 4 . - CDS 45599 - 46003 456 ## CBO2362 hypothetical protein 59 16 Op 5 . - CDS 45996 - 46400 647 ## gi|227485918|ref|ZP_03916234.1| hypothetical protein HMPREF0072_1321 60 16 Op 6 . - CDS 46255 - 46533 70 ## 61 16 Op 7 . - CDS 46530 - 46688 142 ## gi|227485919|ref|ZP_03916235.1| hypothetical protein HMPREF0072_1322 62 16 Op 8 . - CDS 46726 - 46992 431 ## gi|227485920|ref|ZP_03916236.1| hypothetical protein HMPREF0072_1323 63 16 Op 9 . - CDS 47004 - 47297 389 ## gi|227485921|ref|ZP_03916237.1| hypothetical protein HMPREF0072_1324 - Prom 47355 - 47414 5.2 + Prom 47271 - 47330 5.4 64 17 Tu 1 . + CDS 47358 - 47630 321 ## gi|227485922|ref|ZP_03916238.1| hypothetical protein HMPREF0072_1325 + Term 47638 - 47695 9.1 - Term 47500 - 47545 -0.8 65 18 Tu 1 . - CDS 47603 - 47884 272 ## gi|227485923|ref|ZP_03916239.1| hypothetical protein HMPREF0072_1326 - Prom 47994 - 48053 11.6 + Prom 47875 - 47934 9.1 66 19 Op 1 . + CDS 48028 - 48651 636 ## Smon_0909 transcriptional regulator, XRE family 67 19 Op 2 . + CDS 48729 - 49748 466 ## gi|227485925|ref|ZP_03916241.1| hypothetical protein HMPREF0072_1328 + Term 49824 - 49873 1.9 + Prom 49791 - 49850 3.8 68 20 Tu 1 . + CDS 49884 - 51251 920 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs + Term 51253 - 51284 -0.6 - Term 51112 - 51145 -0.7 69 21 Tu 1 . - CDS 51286 - 52173 1056 ## gi|227485927|ref|ZP_03916243.1| hypothetical protein HMPREF0072_1330 - Prom 52243 - 52302 7.7 70 22 Tu 1 . - CDS 52357 - 52542 124 ## - Prom 52698 - 52757 3.8 + Prom 52479 - 52538 5.6 71 23 Tu 1 . + CDS 52710 - 53033 402 ## gi|227485929|ref|ZP_03916245.1| hypothetical protein HMPREF0072_1332 + Term 53189 - 53259 12.4 + Prom 53849 - 53908 10.3 72 24 Tu 1 . + CDS 54008 - 55642 961 ## mru_0024 hypothetical protein + Term 55649 - 55686 3.0 - Term 55637 - 55671 1.1 73 25 Op 1 2/0.000 - CDS 55672 - 56628 828 ## COG0270 Site-specific DNA methylase 74 25 Op 2 . - CDS 56630 - 57706 782 ## COG0270 Site-specific DNA methylase 75 25 Op 3 . - CDS 57721 - 57906 120 ## gi|227485933|ref|ZP_03916249.1| hypothetical protein HMPREF0072_1336 - Prom 58003 - 58062 8.7 + Prom 58075 - 58134 4.9 76 26 Op 1 . + CDS 58284 - 58478 56 ## 77 26 Op 2 . + CDS 58560 - 59729 926 ## COG3547 Transposase and inactivated derivatives + Term 59756 - 59791 3.7 - Term 59971 - 60000 -0.4 78 27 Op 1 . - CDS 60006 - 61403 1247 ## Apre_0187 peptidase S41 79 27 Op 2 . - CDS 61390 - 61737 212 ## Apre_0186 hypothetical protein 80 27 Op 3 9/0.000 - CDS 61739 - 62749 855 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 81 27 Op 4 20/0.000 - CDS 62746 - 63183 515 ## PROTEIN SUPPORTED gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 82 27 Op 5 12/0.000 - CDS 63180 - 63842 207 ## PROTEIN SUPPORTED gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase 83 27 Op 6 . - CDS 63823 - 64269 396 ## COG0802 Predicted ATPase or kinase - Prom 64314 - 64373 2.4 - Term 64332 - 64373 8.1 84 28 Op 1 . - CDS 64413 - 65006 777 ## COG3601 Predicted membrane protein - Prom 65126 - 65185 2.6 - Term 65033 - 65080 1.3 85 28 Op 2 . - CDS 65253 - 65912 670 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 65940 - 65999 9.1 - Term 66197 - 66244 5.1 86 29 Op 1 . - CDS 66253 - 66942 962 ## COG0588 Phosphoglycerate mutase 1 87 29 Op 2 . - CDS 66942 - 67991 1233 ## COG1077 Actin-like ATPase involved in cell morphogenesis - Prom 68067 - 68126 8.4 - Term 68731 - 68766 1.5 88 30 Op 1 . - CDS 68960 - 70132 1818 ## COG0192 S-adenosylmethionine synthetase 89 30 Op 2 19/0.000 - CDS 70125 - 70604 648 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 90 30 Op 3 4/0.000 - CDS 70601 - 71302 305 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 91 30 Op 4 . - CDS 71295 - 72392 798 ## PROTEIN SUPPORTED gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 92 30 Op 5 . - CDS 72415 - 72894 660 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD - Prom 72914 - 72973 5.2 93 31 Op 1 . - CDS 72987 - 73883 1014 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 94 31 Op 2 . - CDS 73958 - 74590 699 ## gi|227485951|ref|ZP_03916267.1| hypothetical protein HMPREF0072_1354 95 31 Op 3 . - CDS 74587 - 75126 509 ## Mrub_0214 hypothetical protein 96 31 Op 4 . - CDS 75126 - 75383 255 ## Apre_0209 hypothetical protein 97 31 Op 5 . - CDS 75419 - 75709 547 ## gi|227485954|ref|ZP_03916270.1| hypothetical protein HMPREF0072_1357 - Prom 75731 - 75790 9.7 - Term 75779 - 75808 1.2 98 32 Tu 1 . - CDS 75812 - 78631 2534 ## COG0178 Excinuclease ATPase subunit - Prom 78701 - 78760 12.9 - Term 79465 - 79495 2.0 99 33 Tu 1 . - CDS 79688 - 81643 2590 ## COG0556 Helicase subunit of the DNA excision repair complex - Prom 81861 - 81920 5.6 + Prom 81736 - 81795 3.9 100 34 Tu 1 . + CDS 81912 - 82460 702 ## COG3859 Predicted membrane protein + Term 82469 - 82514 4.9 101 35 Op 1 . - CDS 83381 - 85021 1284 ## Apre_0167 hypothetical protein 102 35 Op 2 . - CDS 85014 - 85739 188 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 - Prom 85774 - 85833 9.6 + Prom 85710 - 85769 12.3 103 36 Op 1 8/0.000 + CDS 85880 - 86239 489 ## COG1725 Predicted transcriptional regulators 104 36 Op 2 . + CDS 86236 - 86919 209 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 105 36 Op 3 . + CDS 86919 - 87713 905 ## Apre_0171 hypothetical protein 106 36 Op 4 . + CDS 87724 - 88347 846 ## gi|227485965|ref|ZP_03916281.1| hypothetical protein HMPREF0072_1368 + Term 88353 - 88398 7.3 - Term 88347 - 88378 2.5 107 37 Op 1 . - CDS 88382 - 88711 236 ## gi|227485966|ref|ZP_03916282.1| hypothetical protein HMPREF0072_1369 108 37 Op 2 . - CDS 88689 - 89834 1565 ## Apre_0165 lipopolysaccharide biosynthesis protein 109 37 Op 3 . - CDS 89847 - 90851 783 ## Apre_0164 hypothetical protein - Prom 91068 - 91127 11.4 110 38 Tu 1 . - CDS 91246 - 91470 251 ## gi|227485969|ref|ZP_03916285.1| hypothetical protein HMPREF0072_1372 - Term 91851 - 91879 -0.0 111 39 Tu 1 . - CDS 92120 - 92347 250 ## gi|227485970|ref|ZP_03916286.1| hypothetical protein HMPREF0072_1373 - Prom 92368 - 92427 8.1 - Term 92392 - 92421 1.2 112 40 Op 1 . - CDS 92429 - 93481 1456 ## COG3595 Uncharacterized conserved protein 113 40 Op 2 . - CDS 93474 - 93830 496 ## COG3877 Uncharacterized protein conserved in bacteria - Prom 93886 - 93945 8.6 114 41 Op 1 . - CDS 93975 - 94667 548 ## Apre_0161 hypothetical protein 115 41 Op 2 25/0.000 - CDS 94651 - 95664 910 ## COG0438 Glycosyltransferase 116 41 Op 3 . - CDS 95633 - 96796 1046 ## COG0438 Glycosyltransferase - Prom 96828 - 96887 5.5 + Prom 96871 - 96930 9.1 117 42 Tu 1 . + CDS 96966 - 97136 142 ## + Term 97297 - 97325 1.6 + Prom 97771 - 97830 7.1 118 43 Op 1 . + CDS 97879 - 98232 291 ## Apre_0158 hypothetical protein 119 43 Op 2 . + CDS 98243 - 99508 803 ## Amet_4219 MerR family transcriptional regulator - Term 99501 - 99540 -0.1 120 44 Op 1 3/0.000 - CDS 99549 - 100391 1112 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 121 44 Op 2 . - CDS 100420 - 102339 2143 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family 122 44 Op 3 . - CDS 102340 - 103572 829 ## COG0477 Permeases of the major facilitator superfamily + Prom 104110 - 104169 7.0 123 45 Tu 1 . + CDS 104191 - 106863 3143 ## COG0474 Cation transport ATPase + Term 106931 - 106989 11.2 - Term 106926 - 106971 6.0 124 46 Tu 1 . - CDS 106978 - 107304 444 ## COG1447 Phosphotransferase system cellobiose-specific component IIA - Prom 107513 - 107572 8.7 + Prom 107291 - 107350 6.9 125 47 Op 1 2/0.000 + CDS 107376 - 109472 1767 ## COG3711 Transcriptional antiterminator 126 47 Op 2 13/0.000 + CDS 109489 - 109821 377 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 127 47 Op 3 1/0.000 + CDS 109826 - 111154 1306 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 128 47 Op 4 1/0.000 + CDS 111154 - 112239 968 ## COG3589 Uncharacterized conserved protein 129 47 Op 5 . + CDS 112250 - 112573 596 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 130 48 Op 1 7/0.000 - CDS 112665 - 113225 813 ## COG2059 Chromate transport protein ChrA 131 48 Op 2 . - CDS 113218 - 113754 558 ## COG2059 Chromate transport protein ChrA - Prom 113935 - 113994 9.9 + Prom 113933 - 113992 10.7 132 49 Op 1 . + CDS 114015 - 114857 1180 ## gi|227485990|ref|ZP_03916306.1| hypothetical protein HMPREF0072_1393 + Term 114863 - 114898 4.4 + Prom 114878 - 114937 6.8 133 49 Op 2 . + CDS 114981 - 115640 697 ## COG0637 Predicted phosphatase/phosphohexomutase + Term 115643 - 115698 11.1 - Term 115753 - 115800 -0.9 134 50 Tu 1 . - CDS 115810 - 117087 1702 ## COG3875 Uncharacterized conserved protein - Prom 117110 - 117169 5.3 - Term 117158 - 117187 -0.2 135 51 Tu 1 . - CDS 117188 - 118531 1198 ## COG0534 Na+-driven multidrug efflux pump - Prom 118566 - 118625 9.6 + Prom 118503 - 118562 4.0 136 52 Tu 1 . + CDS 118617 - 119219 666 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Term 119303 - 119350 2.5 + Prom 119224 - 119283 8.8 137 53 Op 1 2/0.000 + CDS 119381 - 121270 2105 ## COG3711 Transcriptional antiterminator 138 53 Op 2 8/0.000 + CDS 121263 - 121595 486 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 139 53 Op 3 2/0.000 + CDS 121595 - 121912 501 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 140 53 Op 4 8/0.000 + CDS 121921 - 123276 1424 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 141 53 Op 5 . + CDS 123273 - 124583 1237 ## COG1455 Phosphotransferase system cellobiose-specific component IIC + Term 124595 - 124639 9.2 + Prom 124760 - 124819 8.4 142 54 Op 1 1/0.000 + CDS 124839 - 125984 587 ## COG0477 Permeases of the major facilitator superfamily + Prom 125998 - 126057 3.6 143 54 Op 2 . + CDS 126120 - 127025 774 ## COG0657 Esterase/lipase + Term 127026 - 127052 -1.0 - Term 127162 - 127205 6.8 144 55 Op 1 9/0.000 - CDS 127208 - 128098 1023 ## COG1760 L-serine deaminase 145 55 Op 2 . - CDS 128107 - 128766 846 ## COG1760 L-serine deaminase - Prom 128797 - 128856 4.0 146 55 Op 3 . - CDS 128861 - 130072 1402 ## COG1301 Na+/H+-dicarboxylate symporters - Prom 130227 - 130286 9.4 - Term 130564 - 130620 5.1 147 56 Op 1 . - CDS 130627 - 131760 1042 ## Apre_0094 hypothetical protein 148 56 Op 2 . - CDS 131761 - 133125 1620 ## COG0114 Fumarase 149 56 Op 3 . - CDS 133125 - 134543 1854 ## COG1027 Aspartate ammonia-lyase - Prom 134570 - 134629 9.5 - Term 134635 - 134666 2.5 150 57 Tu 1 . - CDS 134671 - 135801 1737 ## Apre_0477 sortase B cell surface sorting signal - Prom 135880 - 135939 9.3 - Term 135933 - 135963 1.0 151 58 Tu 1 . - CDS 135977 - 137107 1487 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase - Prom 137322 - 137381 7.6 152 59 Op 1 2/0.000 - CDS 137515 - 139452 782 ## COG3711 Transcriptional antiterminator 153 59 Op 2 . - CDS 139466 - 139762 376 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 154 59 Op 3 . - CDS 139771 - 140307 471 ## COG0794 Predicted sugar phosphate isomerase involved in capsule formation 155 59 Op 4 2/0.000 - CDS 140300 - 140887 503 ## COG0036 Pentose-5-phosphate-3-epimerase 156 59 Op 5 . - CDS 140958 - 141401 360 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 157 59 Op 6 . - CDS 141410 - 142669 730 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 158 59 Op 7 . - CDS 142682 - 143431 221 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 143538 - 143597 8.5 - Term 143610 - 143653 6.1 159 60 Tu 1 . - CDS 143654 - 143776 57 ## - Prom 143821 - 143880 3.8 - Term 144010 - 144040 1.0 160 61 Op 1 3/0.000 - CDS 144051 - 145034 1514 ## COG3684 Tagatose-1,6-bisphosphate aldolase 161 61 Op 2 10/0.000 - CDS 145031 - 145960 1302 ## COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) 162 61 Op 3 1/0.000 - CDS 146018 - 146767 614 ## COG1349 Transcriptional regulators of sugar metabolism 163 61 Op 4 . - CDS 146804 - 148207 1824 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 148232 - 148291 4.3 164 62 Op 1 8/0.000 - CDS 148383 - 149783 1614 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 165 62 Op 2 13/0.000 - CDS 149807 - 151498 2055 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 166 62 Op 3 . - CDS 151519 - 151845 498 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 167 62 Op 4 4/0.000 - CDS 151861 - 152391 679 ## COG0698 Ribose 5-phosphate isomerase RpiB 168 62 Op 5 . - CDS 152403 - 152855 615 ## COG0698 Ribose 5-phosphate isomerase RpiB 169 62 Op 6 . - CDS 152865 - 154307 1522 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase - Prom 154338 - 154397 3.4 170 63 Tu 1 . - CDS 154415 - 155329 1203 ## COG2971 Predicted N-acetylglucosamine kinase - Prom 155367 - 155426 4.1 171 64 Op 1 16/0.000 + CDS 155787 - 156869 1440 ## COG1879 ABC-type sugar transport system, periplasmic component + Term 156880 - 156923 2.4 172 64 Op 2 10/0.000 + CDS 156931 - 158427 200 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 173 64 Op 3 . + CDS 158437 - 159471 1373 ## COG4211 ABC-type glucose/galactose transport system, permease component + Term 159690 - 159724 2.2 - Term 159839 - 159884 11.1 174 65 Op 1 . - CDS 159923 - 161032 600 ## COG3274 Uncharacterized protein conserved in bacteria 175 65 Op 2 . - CDS 161096 - 162457 1578 ## COG0372 Citrate synthase 176 65 Op 3 1/0.000 - CDS 162459 - 163457 1285 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 177 65 Op 4 . - CDS 163454 - 165391 2431 ## COG1048 Aconitase A - Prom 165521 - 165580 9.9 + Prom 165474 - 165533 12.9 178 66 Tu 1 . + CDS 165655 - 166809 1650 ## COG1454 Alcohol dehydrogenase, class IV + Term 166849 - 166881 2.0 - TRNA 166965 - 167040 78.9 # Gln CTG 0 0 - Term 166892 - 166947 0.0 179 67 Tu 1 . - CDS 167101 - 167826 464 ## Apre_0068 hypothetical protein - Prom 167850 - 167909 10.6 - Term 167887 - 167924 1.6 180 68 Op 1 . - CDS 168104 - 170491 2414 ## FMG_0026 hypothetical protein 181 68 Op 2 42/0.000 - CDS 170503 - 171297 721 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 182 68 Op 3 25/0.000 - CDS 171304 - 171978 263 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 183 68 Op 4 . - CDS 171959 - 172897 1013 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 173093 - 173152 9.8 + Prom 173587 - 173646 10.0 184 69 Tu 1 . + CDS 173757 - 174653 770 ## Teth514_1217 hypothetical protein + Term 174665 - 174701 2.5 - 5S_RRNA 175255 - 175790 90.0 # AF142677 [R:48033..48709] # 5S ribosomal RNA # Bacillus megaterium # Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. + Prom 176147 - 176206 4.2 185 70 Tu 1 . + CDS 176275 - 176538 141 ## CE1543 hypothetical protein + Term 176698 - 176728 -0.5 - SSU_RRNA 178548 - 179912 100.0 # AF542233 [D:1..1411] # 16S ribosomal RNA # Anaerococcus lactolyticus # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis; Anaerococcus. Predicted protein(s) >gi|229269862|gb|GG666049.1| GENE 1 105 - 2966 3236 953 aa, chain + ## HITS:1 COG:CAC3006 KEGG:ns NR:ns ## COG: CAC3006 COG1026 # Protein_GI_number: 15896258 # Func_class: R General function prediction only # Function: Predicted Zn-dependent peptidases, insulinase-like # Organism: Clostridium acetobutylicum # 5 947 13 971 976 434 32.0 1e-121 MNKNYELIKSENFPAIGIEAFHYRHIKTRANIVFAKKDDANKTFGIGFKTPPTNSKGMAH IMEHSVLNGSEKFPSKDPFMAMDSSSLQTFLNAMTYPDKTVFPVSSENDKDFKNLVDVYT DAVFAPLVIEKKEILDQEGWHYDLDGDKVVGVSGVVYNEMKGALSDPESLIDNDINSYLY KNSPYQYESGGDPRVIKDLTYDEFKEFYKNHYHPSNAYIYFYGNIDDIDTYLAKLDEDYL SKYDYKDLNLAIEVKENIYENPIESTYPASEEKSGEDYLTYAMLSHSALDIKETLTAAIL VNALFNMDSSKIRTEIQEKLAPEYFYARNAYGNRSALIIQAQKTDASKKNDFVGIIERGL RNASEGINKEALKSAFSLFDFGQRENLNSVNAGLNYYLSMSFDADPFEVFRLVDYLKELK SLIDTTYYEDFIKKFYLDNPTKLVHISRPSVDYNKNQEEDFQKYLDIINKEMTPEKLAQI KEDLARLKAYQDSEDSEEIKAMIPKLDIEDVPTQTRPVPREVETDNFEYVFNDLATAGLT YTDMYFNVGHLSLDDFKYAQLLGELLGSIDTKTMKYTEIDDLIWQRLGSLNFSIMTFKKG PEEIDRTFKVSFKTLPAYTKEATKIVKDFISNSLFANQARILELLRIRKAVFESKMYDTG HMIAINRANSHIDKHAFIQENLSGIAYYDFIKENIALAESNFKELRVRLENVYKRIFTKD LSINITSKKANYDLMKAAINSEFNSLDERENDVEFAFESRPRKEAIMTDANVNYVSKSAN FYDFEGGYKGKFLLSGSIMSNPYLYSLIRAQGGAYGAGMFISRSMLLATYSYRDPNISST IDAFNSLGDIAKDLKMTDRDFENQKISSMGSILRPRSPKQMGDADYSYFRIPSAKKEDDI LAEIKSASLDDIKSLSESFKKAMELDNLVVFGARADIEKNKDLFDEIKDLKNS >gi|229269862|gb|GG666049.1| GENE 2 3064 - 4155 922 363 aa, chain + ## HITS:1 COG:no KEGG:Apre_0196 NR:ns ## KEGG: Apre_0196 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 359 1 377 378 338 51.0 2e-91 MKKKDKFSQKDAFNINFDFDDIDFESIGETIKNSVNKAVSSFSKGYKKNLPAAKNPDICE QKPKEKSKSSLLKIGAFIVGSTLFAIGMDTIENWGLGAKMIGLLCLGGAVAAPVLMWKLS SHYKRLAINYSRYRRELGNSTIISIRDLASAVSQTEEETIKDLLYFMKQNYFKQARIVEN DSIFILDIPTFKLYKENLGRVPSYEKDQIGPTDDFDTQKASDILTNCGKILMDMEEKAKK ISSPSFRSNLAPLFENIKDILSILEKYPDKALALNKFNDFYMPTSYKLVESYQEFEALET TDAKILKSMAEIEGSIKTITEAFDKIKVDLISDRAMDIKTDIDTINLVLKQEGLVEGDFK DNE >gi|229269862|gb|GG666049.1| GENE 3 4148 - 5263 1592 371 aa, chain + ## HITS:1 COG:BS_yaaN KEGG:ns NR:ns ## COG: BS_yaaN COG3853 # Protein_GI_number: 16077094 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in tellurite resistance # Organism: Bacillus subtilis # 20 368 28 381 386 213 39.0 4e-55 MSDIELKLDGIEENDEKLDQILKAEPEKIENKIVFTEAEEKMIDEFSKKIDLDNTNIILQ YGSGAQKKISTFSEKTLDAVKDKDLGQIGKLLDTVVMDIKTMDDEEESKGPLGFFKKAGR KIENLKVKYQSTEKNINEVARALENHQITLMKDISMLDQMYDLNEEYYKEISMYIEAGKR KLDDLYKNDLPALERAAAESNLPLDAQKVNDLKAQANRFEKKLHDLDLTRMVSIQMAPQI RMVQSSNSIMAEKIQTTIVTTIPLWKNQMVLALGMHHTDQAIRTQQMVTDLTNDLLKKNA DTLKQNTIETAKATERGIVDVETIKHTNDALISTIEEVRNIQIEGAKNRQKAQAEIRNLE EELKKNLIRRN >gi|229269862|gb|GG666049.1| GENE 4 5605 - 5886 412 93 aa, chain + ## HITS:1 COG:no KEGG:Apre_0194 NR:ns ## KEGG: Apre_0194 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 8 93 3 86 86 135 87.0 4e-31 MHDFKPGEKIEFKFDCQMLIARTDTDLDEDEIFDYISDNLEGDSLLAVGDEDLIKIHFHS NKPWEVLEYAASLGDIHDIVVENMQRQADGLQG >gi|229269862|gb|GG666049.1| GENE 5 6940 - 7338 475 132 aa, chain - ## HITS:1 COG:SP0256 KEGG:ns NR:ns ## COG: SP0256 COG0454 # Protein_GI_number: 15900191 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 1 132 2 133 138 102 37.0 2e-22 MEIKVGIIPERDQVLALYEDAGWTSYTDEPDLLMKAIENSLKVWTLWDGEKLIGLARTIG DGATICYLQDLLILKAYQGQCFGSYLLKEIMQENKQIRQFILLTEDSEKTKEFYKKLGLS EVADYDCKAFMW >gi|229269862|gb|GG666049.1| GENE 6 7351 - 8253 772 300 aa, chain - ## HITS:1 COG:no KEGG:SZO_15210 NR:ns ## KEGG: SZO_15210 # Name: not_defined # Def: lipoprotein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 14 299 1 283 290 211 40.0 2e-53 MPIAKNFIPQGGIMKKILLSLMILGAVFTGCGKKDMPDKADNKAKTEIKTASLSNMANED SFKFVEGVLKENLGADNDMAAANVDKFLAMVKDYNQSVGEKNLIGDFKEDLKPSYDSGVL IENRQKAEKKFPDTNCRINAFLLAIDNMKERKSGAADDEILFMDEEKIKEGKIFDRDNEE AFKKFFSRVPTDASKEPIKQGKVMEDYLANWSFPAKADLISVVIHDNLDGNYLFIGHIGV LVKIEGGYLFVEKISFEEPYQAIKFPDKKACYDYLKEKFKDYTDPSTCPPFVMDNGKYVG >gi|229269862|gb|GG666049.1| GENE 7 8475 - 9773 1611 432 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485863|ref|ZP_03916179.1| ## NR: gi|227485863|ref|ZP_03916179.1| hypothetical protein HMPREF0072_1266 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1266 [Anaerococcus lactolyticus ATCC 51172] # 1 432 1 432 432 690 100.0 0 MNKFKKTLATALACALTFGIGTKAFADEGVRGPSLFEILTGDTGGSKIEETKKTSKESRE EVNDYEKDPSYQEEFKARYDLYMKILEAKEIEKVDEKGYIDILNKKAASKEDLEKVTEDL TKKINDSGEKVTLDVDIDTVKEEVKDYILYGKLLFLNTLDKSDIKNLYLFYEANVNSYSL TKADENGKKPFKPVLEEIYKYILEIDEKVKEKIDISEEDKKKTSDLFEKLEKTIKDNHEK VLSHQATKLVKTSFLTSGNEIDGKINENSAFYKSTRPGIKEAYKNLKANQRDFLDQINTN NDDYISDEEIKANGQYTLPLDDTNFIKPFYGNAEEIKKSVELSTTQVQGQTPQTTPPTTT PQNPATSLPETVTLSKGDNQLGAGDEKSKDVPTTVTKPASQVKTGIRGVGYLGIVLVLAI IAFVVLGKKKEK >gi|229269862|gb|GG666049.1| GENE 8 9884 - 10732 1071 282 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485864|ref|ZP_03916180.1| ## NR: gi|227485864|ref|ZP_03916180.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 282 1 282 282 451 100.0 1e-125 MKKKILVILALCLVFTACKADKDQNKETENKPVQEVQSQEKEEGKDKKEDKDKKEGKDKK EAEIDKEKEKTDEEKLSKDEKNSDSKIFSMLEDKEFVAYITDRSDFIYFYKDGTFDGCTY SGGPEKVACLYTGRFGKPRKLDDKSYSLTLEEIKYQTPTKGNIEGSKTNDVYYPSIYFDE SMKGQEYIVYLPGTNLHDLEQVGVSHELGYDENVKNGVINMYTIAKNPVKSLDYPGEVIF MEEETNRKYWCAKPELKKEDPENNCFQKLLFGDKPNPYKGKL >gi|229269862|gb|GG666049.1| GENE 9 11199 - 11402 206 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485866|ref|ZP_03916182.1| ## NR: gi|227485866|ref|ZP_03916182.1| hypothetical protein HMPREF0072_1269 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1269 [Anaerococcus lactolyticus ATCC 51172] # 1 67 1 67 67 76 100.0 8e-13 MEKQLKTSEAQARARDKWDSKNKHNKTKRSYRSGCKNYILKYADIEELEEVKSWIEKAEE NMENSEG >gi|229269862|gb|GG666049.1| GENE 10 11564 - 12094 907 176 aa, chain - ## HITS:1 COG:no KEGG:FMG_P0070 NR:ns ## KEGG: FMG_P0070 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 176 1 173 183 132 53.0 5e-30 MTNELKAYEDRYDYTVRGQEFQKGFEDLIIELSLTAETSYTIYVDTENNDIDAMPSCDYG SVSDTYYGINKAILDWEIESGHSRISDAFESSELEDFATEDEVKELRRKFEEEKDYSEDW YEDKRDFYRDYATDYVEFLLNAENENIDKGVEAYARDTVDFYKEQFDEKYYELLED >gi|229269862|gb|GG666049.1| GENE 11 12162 - 12455 429 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485868|ref|ZP_03916184.1| ## NR: gi|227485868|ref|ZP_03916184.1| hypothetical protein HMPREF0072_1271 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1271 [Anaerococcus lactolyticus ATCC 51172] # 1 97 1 97 97 127 100.0 3e-28 MLQVKDLINDITYAQGENEEEIVKSWNENLKEKFDWIEDEELLEEIAEEIHDLEGIKDML NTINEAFDSQFIDAIDNNKALKWSHMTNTLVDKKYYQ >gi|229269862|gb|GG666049.1| GENE 12 12632 - 13033 453 133 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485869|ref|ZP_03916185.1| ## NR: gi|227485869|ref|ZP_03916185.1| hypothetical protein HMPREF0072_1272 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1272 [Anaerococcus lactolyticus ATCC 51172] # 1 133 1 133 133 187 100.0 2e-46 MENTLNTALTALIIAVVPILATFLANVLNYQAQKLKEENKGTKQEQLNKYIDLATKTIID VVKAGAQKTVDALKKNGEFTKERQEEVFNEAKKEIIKILSEDTKKALEEAYGDVNAWLEN TIEAEVKNLKLSK >gi|229269862|gb|GG666049.1| GENE 13 13046 - 14548 1242 500 aa, chain - ## HITS:1 COG:SPy1438_1 KEGG:ns NR:ns ## COG: SPy1438_1 COG1705 # Protein_GI_number: 15675348 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Muramidase (flagellum-specific) # Organism: Streptococcus pyogenes M1 GAS # 23 151 20 145 174 139 55.0 2e-32 MNNKEFIAKIGPLAKVEEERSGVLASLTIAQAILESGWGKSGLTVKGNALFGIKAGSNWH GKVYNTKTQECFDGRNFETITAGFRAYNSWAESIKDHSELLTGLSRYKKVVGEKDYKKAC REIQAAGYATDPNYANKLIQIIEENNLNQWNAATSAAGIGVSGKMNVNDFIKKLYNVKNN YRTIYAWGCFGGIMTNSMVENKAKQYPYMYDAATKAAMKRAGNQGAFGFDCVNLIKGILW GWNGNRNATWGGAIYASNGVPDISADGMINKCIGVSSNFNNIQPGEAVWLPGHIGVYVGN GRVIECTPKWTNGVQETALLNHGPIAGLNGRRWSRHGKIPYINYNVGYQPQRPSQGSKKT NTEVAKEVLAGAWGNGNERKSNLEAAGYNYQQVQTEVNRLLSGAKQPEPRKPVSEIAKEV LEGKWGNGSTRKSKLEAAGYNYNQVQAEVNRQLRKPIKSVTEVAKEVIAGKWGNGSERKR KLQAAGYNYNQVQAEVNKLV >gi|229269862|gb|GG666049.1| GENE 14 14557 - 14946 253 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485871|ref|ZP_03916187.1| ## NR: gi|227485871|ref|ZP_03916187.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 129 1 129 129 197 100.0 2e-49 MKGAIKLYKLAITFLLGAASFFLVTFCLKKILESKKKKGNKGGRKPEFKKIVVASVLTTY FLGVGFGAYIVFKYDYSQLAPWLTFIGAPTTGAILSYCYVIRTENAIKLKQLYPEETEGY TVDVNNTSV >gi|229269862|gb|GG666049.1| GENE 15 14921 - 15232 276 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485872|ref|ZP_03916188.1| ## NR: gi|227485872|ref|ZP_03916188.1| hypothetical protein HMPREF0072_1275 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1275 [Anaerococcus lactolyticus ATCC 51172] # 1 103 1 103 103 136 100.0 6e-31 MNEANLIIGLVATVIGIISTVIAYQKGLKTESKKDGEESATISQQISHLSEAINEIKSTT KETNQSISKYAERIIKLEAQQLSTEKRIDSIMNLINERGNQVV >gi|229269862|gb|GG666049.1| GENE 16 15243 - 15386 91 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485873|ref|ZP_03916189.1| ## NR: gi|227485873|ref|ZP_03916189.1| hypothetical protein HMPREF0072_1276 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1276 [Anaerococcus lactolyticus ATCC 51172] # 1 47 1 47 47 73 100.0 3e-12 MDFLKLAWEYQWITLEELKTLVITKATPWGDITPEEFKIITGKEFEQ >gi|229269862|gb|GG666049.1| GENE 17 15386 - 15607 284 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485874|ref|ZP_03916190.1| ## NR: gi|227485874|ref|ZP_03916190.1| hypothetical protein HMPREF0072_1277 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1277 [Anaerococcus lactolyticus ATCC 51172] # 1 73 1 73 73 83 100.0 5e-15 MAVTHRKDSIIEIKKEKAEKQKGFMAVGKQIAKITVDANEKEKIIETLGKQFAMQMLEIS RLKKEIAELKGGK >gi|229269862|gb|GG666049.1| GENE 18 15622 - 17343 1589 573 aa, chain - ## HITS:1 COG:no KEGG:Sgly_0562 NR:ns ## KEGG: Sgly_0562 # Name: not_defined # Def: hypothetical protein # Organism: S.glycolicus # Pathway: not_defined # 374 573 375 572 572 132 41.0 5e-29 MAQKLSNLPVGAKVKDNLSKYNGKPIIWKIADKNHSGYPSNSVTLITDRIISFKAFDAQE SKNSNSDRRDYGNNYYKYSNLLQWLNSDKNSWYTAQHGADAPPSSGNVWDRQNPYDTEPG FLYNFSANFKEAMLETSLKTVRHSLDGGGSESVVSKMFLASSTEVGLANEGGTAEGSKFP IFDSDASRKAYPTQEAVSKSTYKTSGLNSSSSWYWWLRTPYMSHSYSVRYVSSDGSLNWS RARDGNGGVRPLCNLQSGILVSNNTDSDGAYTIEWNQPPTTPTGITVPTKVQAGKTVEIT WGSSTDPEGNSVGYTLERKVDERSYDRIYKGINRSYQDTITKGWQKVSYRVKAYDNYGLE SGYATSNERMVNNNEDPVINSNSSSSLGTKAGAFSLAYSVTDPDAGQSLNVKEYLNGVEK RSFTATSGTNYNFNISSAEWLEILNGEQTIKIIATDSEGGQSEKEFKFSKNETEILFELK NPLDSDAMVTKALLTLIGKLPSGAVSKIEICNNGYDKNPTWEDVTLKVEKGSKIFLSNKT KTASKWGVNIRVSVKRNGAEGECYISSTGGNFE >gi|229269862|gb|GG666049.1| GENE 19 17324 - 18442 815 372 aa, chain - ## HITS:1 COG:alr3497 KEGG:ns NR:ns ## COG: alr3497 COG3344 # Protein_GI_number: 17230989 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Nostoc sp. PCC 7120 # 4 353 8 343 352 156 29.0 8e-38 MKYYRDLTEFESLRKAFNKAKLGNREKESVARFENNQIEAILYLQYLLRTGKYKTSEYYE FYVYEPKKRLVKTNSFKDKVAQQALCEEVVRPILKNVLIKDNYASQPKKGTHFGLERLQG FLRNYYFSRKAKMEKERRSEGKRPSEEDIKSYSTGYVLKCDIKKYFYNIQHKELKRMVRR YFHEQNVRWLINHIIDSDVDPGIPIGNQLSQWLALLFLNDMDHLIKERLGIKYYGRYMDD FYLIHEDKDYLKYCLGEIEEYLKGIGLELNQKTQIFPLRHGIDFLGFHTYLTESGKVVRK LRRGSKNRMKKKIRKYASMLEKGEITPDEVEKSYKSWKAHASHGDCYYLIKKMDQYYNQK IVKEKLNGAKIK >gi|229269862|gb|GG666049.1| GENE 20 18720 - 19112 183 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485877|ref|ZP_03916193.1| ## NR: gi|227485877|ref|ZP_03916193.1| hypothetical protein HMPREF0072_1280 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1280 [Anaerococcus lactolyticus ATCC 51172] # 1 130 1 130 130 228 100.0 1e-58 MIEIDKDFQLLTKAKDLANHTIKITDNPRRFPKKYRFTFVNRMQNISLDIYELINTANEL NTNDEEALKERLKLQNLAITKCKTLLFLITLCLENENIGIDDRQAEYWARYILNVKNMAV SWHMKDKQRK >gi|229269862|gb|GG666049.1| GENE 21 19096 - 19350 375 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485878|ref|ZP_03916194.1| ## NR: gi|227485878|ref|ZP_03916194.1| hypothetical protein HMPREF0072_1281 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1281 [Anaerococcus lactolyticus ATCC 51172] # 1 84 4 87 87 146 100.0 4e-34 MEKHAATKKEISCIVAHLFQSLELPCKECSEDTEAIVIKGETYNGKKATMYIKEEGVFYL EGDKEIEEELQAIRGGRCIYDRNR >gi|229269862|gb|GG666049.1| GENE 22 19353 - 20213 1094 286 aa, chain - ## HITS:1 COG:STM4200 KEGG:ns NR:ns ## COG: STM4200 COG5301 # Protein_GI_number: 16767450 # Func_class: R General function prediction only # Function: Phage-related tail fibre protein # Organism: Salmonella typhimurium LT2 # 3 148 4 149 581 111 36.0 2e-24 MAKYGSIVTTKGKEKITKAILEGKKVNITEFAAGDGGGEYYQPTEIQTALNGEKWRGAVQ ECKVNTDSPNLIEIIAVIPPDEGGFTIREIGAFDDDGNLIVIANCPDTEKVVITTGAAGE VKLVIYMEIANAEVIELKVDPFTVSATKADLENHDRDPGAHIGQFADNGQFISHVGNQDI HVTPGMVANYDKALIGLTEHIENLDIHVTKDQKDGWENAKNKAEKNEQGLLSLGIDLSDI QGKLKRLEDGVFNDITGNPFTVNFKDLEGIKLIKGNYNKSKNRIEC >gi|229269862|gb|GG666049.1| GENE 23 20230 - 20964 600 244 aa, chain - ## HITS:1 COG:STM4201 KEGG:ns NR:ns ## COG: STM4201 COG4385 # Protein_GI_number: 16767451 # Func_class: R General function prediction only # Function: Bacteriophage P2-related tail formation protein # Organism: Salmonella typhimurium LT2 # 13 215 6 209 210 87 29.0 3e-17 MNRIDNFDLTKTIPPAIAENEDIKALGKLISLELQKINTEIPKNIIFSRIDELDEETLDI LAYDLNVLWYDYDYKLEIKREIIKDCIKIYRKLGTPYAVKRALGNIFPKTTIKEWFETGD KPYTFSIEINASENGAPANLQAMALDRIRYYKNLRSHLNKITYIMESKANLYAGSAALIG NTLGIYPFTPEDIIQSGRLYIGASEGIGQEVKVYPYVKREIPNTRFIGFANCLIYRIEVS VKPK >gi|229269862|gb|GG666049.1| GENE 24 20957 - 22084 985 375 aa, chain - ## HITS:1 COG:STM4202 KEGG:ns NR:ns ## COG: STM4202 COG3948 # Protein_GI_number: 16767452 # Func_class: R General function prediction only # Function: Phage-related baseplate assembly protein # Organism: Salmonella typhimurium LT2 # 7 374 5 370 371 185 32.0 2e-46 MSSERKKPDIQYVNTDTKELVNLLIQGYESIANKRLYPADPLRLFILWVADIMVQQRVLI DYSAKQNIPRFAEGKYLDNLVEFLNNTIKRLPPQAATTRIRYTLSTKRETATVIPKGSRS TVDGKIFFETTKDLVIPIGETAGDIEAVCTVVGEIGNGFLPGQISKIVDFVPYLEKIENL TATAGGADTESDDSLYSRYREALSTYSTAGPEGAYRFYAKTANASIADVKTVSPTPGVAE IRVLMKDGRLPEEETIKAIEKLLSAEDIRPLTDKVVVKAADKVGYKIDISYYGFKHGQLS AEGIEKAAKFAVEKYKAWQSEKMGRDINPSKLNQMLMEEGIKRVEIRQPQFKEVSDTAVA IAESANLINGGVEDE >gi|229269862|gb|GG666049.1| GENE 25 22077 - 22394 170 105 aa, chain - ## HITS:1 COG:no KEGG:Amico_1105 NR:ns ## KEGG: Amico_1105 # Name: not_defined # Def: gpW/GP25 family protein # Organism: A.colombiense # Pathway: not_defined # 1 104 1 104 106 83 46.0 3e-15 MEITIEKQDSQINLFPKNLIEEVTQNVQMILISPKYSVPLDRDFGTSHKQLDTPVNVAQP KLIMEIVDAIEKYEPRAEITKINFKVDEAKAGKLIPVVGVKIKDE >gi|229269862|gb|GG666049.1| GENE 26 22405 - 22797 194 130 aa, chain - ## HITS:1 COG:no KEGG:Dred_1218 NR:ns ## KEGG: Dred_1218 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 3 129 1 128 129 82 31.0 5e-15 MALIGALGDITFHVSRNAIKTFDNMKWESGAKYASHDVHLQAPKLEYTGIESDNISFDMS FSVFYGIDPVREINNIARARITGEVMRLVIGNKIYGRRWVITKTSKDLEKFDNRGNLLSA KINISLQAYN >gi|229269862|gb|GG666049.1| GENE 27 22813 - 23217 470 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485884|ref|ZP_03916200.1| ## NR: gi|227485884|ref|ZP_03916200.1| hypothetical protein HMPREF0072_1287 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1287 [Anaerococcus lactolyticus ATCC 51172] # 1 134 1 134 134 272 100.0 6e-72 MNDLHEQIKIGKVSSVDVKKRTARVIFEDKEDMVSAELKVLINQPLIKISKKDNGGNWDG VGAYNSEPRNLGGDSYKKELPDTVKLKKVITYQGEPHTHELNVEIHPWLPYVGQFVLCAF PSIGAGDGFILGGF >gi|229269862|gb|GG666049.1| GENE 28 23220 - 24260 1187 346 aa, chain - ## HITS:1 COG:STM4208 KEGG:ns NR:ns ## COG: STM4208 COG3500 # Protein_GI_number: 16767458 # Func_class: R General function prediction only # Function: Phage protein D # Organism: Salmonella typhimurium LT2 # 15 341 22 341 347 126 27.0 5e-29 MSVKYARRTKLEVKYDGADISKDLEYFLNSLTYTDNEEDESDDLQIAVEDKEGRWARDWL KQTGFGKGGEIEASIIQIDEDLNERELKCGKFKVDTVNESGPPTKVTLKASAIPTDSKII AEEKNKAWENIKLSAIAKDIAGKNKLKSEFESEEDPLYDRREQSKKSDIEFLKELCKDAG ISLKVTDKKIVLFDASKFEKLTPIDTIKRGESNVLRWTFGTNFIEAGYSKCEVTYTDPKT KETIKGEFKNPKADQSTGRILKINTKVKDKAEADKLAKKQLREKNKKETQASLELVGNIN YVAGVNLKIDGWGIYDGKYMIQSADHNISNGGYKVSLSLRKVLEGY >gi|229269862|gb|GG666049.1| GENE 29 24257 - 24472 143 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485886|ref|ZP_03916202.1| ## NR: gi|227485886|ref|ZP_03916202.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 71 1 71 71 135 100.0 1e-30 MQETYITIAGDKWDTIAYKTVGDCEKMDLFIKENIKYKDIFIFPAGIEIKIPYIPKEDNL TLPPWKRGGKR >gi|229269862|gb|GG666049.1| GENE 30 24476 - 27130 2542 884 aa, chain - ## HITS:1 COG:BH3518 KEGG:ns NR:ns ## COG: BH3518 COG5412 # Protein_GI_number: 15616080 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Bacillus halodurans # 127 690 7 659 940 66 20.0 2e-10 MAKEFELMFKLHANLGSKFKESFNQAKKATQDLKESISKANSTAGDIAGYKKTQLSLETN IAKQKQYKEELAALETEQIKAGGSSARLAAKIASKREQLERVNVKINETSNSLSQYETRL KEAGVDTSNLSKESARLAQEVEKARAAQEKTAKLGALQAENQKAIGETKSQLTSTIGVIT AVGTATMVAMQKASDATDRVDKLSQKIGMSRQGFQEWDFILSQSGTNIEKMQVGMKTLVN RMEESAKGSGVGADALKRLGVSATDSSGNLKKQEQVMEEVVRKMQDMPEGAEKSKLAFDL FGKSGLELMPLLNSVGGSVDELKDKAHELGLVLSDEAIDAGVNFQDAMDQLKRSLGGVGT QILATLMPTVTEWAGQIAVLTGKVQKFAQEHPHLIQLLTKVAGGLLLAKAGALGLKLGFL QAKKGVFDILGTIERLKSANLIGGISKVKGLIMGMSGGILPVIAAITAIAVAIKLVMGNV DAIREKIRGVFGEGGVAIFDKFVATIRQIGGAIKGILGGGAAEGVSSFFDKFSQGSPIIE SVKGVIESLTGTVSTIISVIAEAAQAILPTLISVITTVAEVVGGVLQAVLPVLLDMISQI LPIIAGAAQTIIPLLAEAINRVAEDIAPIVNFLIPLFMELLNVLMPVIQALATVFTTVLG AAVQQISAIIQGLTGIFVGLIDFITGVFTGNWGQAWQGVKNIFKSAFDALVGIAKAPINA VISLVNKAIGGLNKIKIPDWVPGVGGKGINIPLVPQLWKGSAHAPDTFIAGEQGPELVMG GGGSKVFTAHTTKGIFTGLKESFISAKEMLTNFPTPNFAPAPGMAVVGAGGGMNIQIDSH PTFYMMSGDPHEMQKVLDENNEKIKREIKEEIEDDEENRRRRRY >gi|229269862|gb|GG666049.1| GENE 31 27282 - 27659 312 125 aa, chain - ## HITS:1 COG:no KEGG:DaAHT2_2058 NR:ns ## KEGG: DaAHT2_2058 # Name: not_defined # Def: hypothetical protein # Organism: D.alkaliphilus # Pathway: not_defined # 31 122 20 111 111 62 39.0 5e-09 MEDIKKAIDVIPAEEDQTEINIEVDPERFTVLKYKLTKPLDYEDKKYDELTLDFGKLTGH DALSIEEEMEKQNIYIVSPETSRAYQIRVAARAGGFPHQLSNKMSLRDFNRLANAARNFL IGQEL >gi|229269862|gb|GG666049.1| GENE 32 27726 - 28241 635 171 aa, chain - ## HITS:1 COG:no KEGG:Dred_1213 NR:ns ## KEGG: Dred_1213 # Name: not_defined # Def: phage major tail tube protein # Organism: D.reducens # Pathway: not_defined # 9 170 12 174 175 130 41.0 3e-29 MKIDNGTINFSVYEGANEFLGMAEATLPEISSMTEEIKGAGIAGSFSGPYTGHLEPMSLT LNFRSTTRAAVQLLKPIAHQIELRAAQQKWDNNAGKNIVESVKHVVVANPIKMAPGKLAS ASPTDGSGEYSVSYYAIFIDGQKVVEIDIINFIYYVDGVDYLEDVRKALGK >gi|229269862|gb|GG666049.1| GENE 33 28253 - 29677 1333 474 aa, chain - ## HITS:1 COG:STM4213 KEGG:ns NR:ns ## COG: STM4213 COG3497 # Protein_GI_number: 16767463 # Func_class: R General function prediction only # Function: Phage tail sheath protein FI # Organism: Salmonella typhimurium LT2 # 3 470 5 470 475 162 27.0 9e-40 MAFQHGIRTKQIETSIKTPVTAGSGIAFVVGTAPIQAVNGKVNEPIMCNSYAEAVKYLGY NDNFDYYTICEVMYCHFVLYGVSPVVFVNVLDPKKHKKQVEEKQYPVSDKQVLLPIEAIA ETVVVKGHEKGQDYDLMYTNDNLVLEILDGGNIGQETGELAISFEAVDPTKVTEKDIIGG YEVSTNQYKGLELIDKVFAKYGIITDLILCPKFSKKSTVAAVMATKCENINGIFEAHAVV DLDSSEVKAYGDTTERKKKDNIFSKYQILCWPMVKLGDKKFHLSTQAAARMAKTDVDNDF CPAESPSNKSIKVDGAILEDGTELLLDLKEANYLNSQGIVTAINFIGGYVLWGNQTACFP ANTDVKDYFISIGRMFGWVGNSLILTYWSNVDKKMTPRFVQSIVDSINIWLNGLVSEGKL LGGRVEFKPEDNNLVELMAGKATFHVYLTPPSPAQEIVFALEYDPDYVVAAFQS >gi|229269862|gb|GG666049.1| GENE 34 29677 - 30006 400 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485891|ref|ZP_03916207.1| ## NR: gi|227485891|ref|ZP_03916207.1| hypothetical protein HMPREF0072_1294 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1294 [Anaerococcus lactolyticus ATCC 51172] # 1 109 1 109 109 161 100.0 1e-38 MATKDEKAKKVIEEPITAKAVEEERTYCYIGPNLPDGVLKKNSLIIGTKKAIKEKYKNEI EKYKQLEQLIIPVENLAEAKAKVESDGNILNKYYRDIASTVAANKEGGK >gi|229269862|gb|GG666049.1| GENE 35 29996 - 30481 529 161 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485892|ref|ZP_03916208.1| ## NR: gi|227485892|ref|ZP_03916208.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 161 1 161 161 294 100.0 1e-78 MTPTVLMEAIKAYIQEKTKDIMLPVKVNRGEDSKERPPGVYLMNLPKKTDETQQIPYILI KYLTGKDDEVPGEPDEAQASIRIIVATYAEDAEEGSMALLNIISKLRYNFLKDEEIDQQF RLVPPLEHIIYPDDTRPYYLGEMMTIWTLPPVKREVNFNGY >gi|229269862|gb|GG666049.1| GENE 36 30481 - 31038 611 185 aa, chain - ## HITS:1 COG:no KEGG:Dred_1209 NR:ns ## KEGG: Dred_1209 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 1 181 1 183 185 85 31.0 9e-16 MITITQDTIDRISNLLVEVPNGTERAMASAANRAIAKAKTESFKGVTKEYKIKRNVIAEY TKDSIKNATTSDLCATLIFAGQQIPLYKYSLTKPKYPGKGKVFAGQKTAVALEHAFRNQI TTAKEGIFERTGKSRLPIEQLMGSSMRSMVSNSVVMDQVYKEAQETFDTRLEHEVERLLA GYGGK >gi|229269862|gb|GG666049.1| GENE 37 31042 - 31377 329 111 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485894|ref|ZP_03916210.1| ## NR: gi|227485894|ref|ZP_03916210.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 111 1 111 111 195 100.0 8e-49 MDFKYQADQDIKKVFHNSGEFAEITEFYLDNEPIVAKVVLDYSEYNDRKKAGSDNAEGLY NVDLIMHISLESLKKTPRKGQEIEINNEFYTIGKVKSEMGEIILYLERLME >gi|229269862|gb|GG666049.1| GENE 38 31377 - 32423 1176 348 aa, chain - ## HITS:1 COG:no KEGG:CLH_1724 NR:ns ## KEGG: CLH_1724 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 3 347 4 347 348 379 54.0 1e-104 MPDLFETKTLGTLVERLPRTSTFIRDTFFRNIETFPTKRIDIDFVKGNRRLAPFVHPMIG GKTVPNAGYQTASYEPPLMAPNKITTAEELLNRLAGENPYSGKTAAERAVEKLGKDMAEL EDMITRREEWMATQAIFTGKIPVIGAGVEAEIDFAFENKEVISKAAEKWNAETADPIADI RKWRLKVQRTGHVNCNVMIMSSDVVNYFLNNKKVQALLDTKAYDLAAITPKELPNGATYV GTINEFGLDIYEYNEFYLDDWTNPDKPEDKALVPEKTIALLSTNSNYSRCYGANTIIDEE TKGFVTVEGEMVPETWVERNPARRFVQLNSRFIPVPTEVDSWLVAEVY >gi|229269862|gb|GG666049.1| GENE 39 32435 - 32752 510 105 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485896|ref|ZP_03916212.1| ## NR: gi|227485896|ref|ZP_03916212.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 105 1 105 105 175 100.0 8e-43 MYEIKKENYEGDNIYAGDFPVEIEVVEAKENIGKNTVVALTAGKLAKITAENLGDIYGIT VDEAKANEKVAVYLTGDFRADALDYGTATVDKVKAPLRKISIFIK >gi|229269862|gb|GG666049.1| GENE 40 32768 - 33910 1263 380 aa, chain - ## HITS:1 COG:L34899 KEGG:ns NR:ns ## COG: L34899 COG0740 # Protein_GI_number: 15673378 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Lactococcus lactis # 51 219 37 209 235 114 42.0 4e-25 MKKNKIKKAWNFAIQEEGIAEVTIYGNISDKIDWELGEINPEFFSSDLAYLEQEDINTLI IRINSAGGDVFAATAIYSRLKEFKAKKIVKIDGWAASAATIIAMAGDEIEIAPNGSLMIH DPLFGLEGYFNAKDLIKYIEQLETIKKSIINAYKTKTGKTEEELAQLMEAETWYTGQEAV DAGFCDRLMFEEADVAATADGQIKVNGVLMVSDFKNLPNTVLDHSQNHHANGNDFNIKSN ERKEVKAMDENKETATTTETETKEIKTVEELKEAYPELVKEIEEAAKKEELDRLQAIEEI AAPGAEEIVNDAKYKTKITAGEVAIKILNAQKLKGQNYIKDREKDVKNSGMDRVEGSQGQ KTEEKNEFLEAIDKAYPKTK >gi|229269862|gb|GG666049.1| GENE 41 33891 - 35444 1249 517 aa, chain - ## HITS:1 COG:STM2606 KEGG:ns NR:ns ## COG: STM2606 COG5511 # Protein_GI_number: 16765927 # Func_class: R General function prediction only # Function: Bacteriophage capsid protein # Organism: Salmonella typhimurium LT2 # 73 500 56 492 526 139 25.0 1e-32 MGLFDILKPNKRKNEATRREIEALALGRVKEILNSGYSNYGASRSKKSLIGWRADGGSHK EDIEDNLTILRQRSRDLFMGVPLATGAVKTCRTNVVGGGLLLKSQIDYEAIGISAKEARS LEQKIEREFKLWADSTSCDIERFDNFYELQQLAFLNWLISGDVIVLLPTTERVAMPYDLR IQLIEADRISTPKDKSQDKNIIDGVESNKNGETIAYYICNRHPNSKDLTEKEEWVRVEAY GKNTGRKNVLHLMNRERIGQRRGVPLLAPVIESLKQLGRYTEAELVAAVVSGLLTVFIEK ESYSSEPPFGQIVQEEEQVDRYTENSIELGPGAIIDLNEGEKANIVNPGRPNAAFDGFVT AICRQIGAALEIPYELLLKNFNASYSASRAALLEAWKSFRMYREWLAADFCQPIYEEWLT EAVAKGRIEAPGFFGDPLTKKAYCGAEWNGPAQGLLNPTQEVAAAQKRVENGFSTRSKEA KEMNGTDYYKNISQLKQEEELIQEIRKEIPKVEEEQN >gi|229269862|gb|GG666049.1| GENE 42 35459 - 35707 301 82 aa, chain - ## HITS:1 COG:no KEGG:CLH_1728 NR:ns ## KEGG: CLH_1728 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_E3 # Pathway: not_defined # 11 82 6 77 77 73 54.0 3e-12 MDKSEIKLRREQALKHYNIWLEAEMAVATSQSYTIGSRSLTRANLSEIREQQKYWRKEID RLDTIDNYKGRNRTYIAVPRDI >gi|229269862|gb|GG666049.1| GENE 43 35754 - 36698 710 314 aa, chain - ## HITS:1 COG:no KEGG:MGAS10270_Spy0567 NR:ns ## KEGG: MGAS10270_Spy0567 # Name: not_defined # Def: phage protein # Organism: S.pyogenes_MGAS10270 # Pathway: not_defined # 3 309 11 326 330 251 54.0 4e-65 MKLILDKKKIRKGRPIGLPYIGSKKKISKKIIEIIKQNFGTDKTIYDLFGGGGAITLECK LQGLNVVYNDIDPIPGQMIQKILSEDREYLKTLICSREEFFKIRDKENKTIDDHLKLLIN SFGNNSKHYLYSKDLSDFKYKLARKIIENHDCFEGYKQTETFKKAAYKNKEITQLQQLQQ IQQVEKISGGGTPAKSLRIQQLERLVHLENMKVIPNLEIYNKDYKEFSDIKNSIIYLDPP YKDTNKVYRNNNIDYENFYKRCKEMSKENVVLISGYSMPDDFEIVYEFTKARSTMQGGSH ESKYEKLFMVKDNF >gi|229269862|gb|GG666049.1| GENE 44 36711 - 38348 1155 545 aa, chain - ## HITS:1 COG:XF0711 KEGG:ns NR:ns ## COG: XF0711 COG5525 # Protein_GI_number: 15837313 # Func_class: R General function prediction only # Function: Bacteriophage tail assembly protein # Organism: Xylella fastidiosa 9a5c # 11 526 7 530 580 279 33.0 1e-74 MDAIGEVGVEKVVVMSAAQIGKSDACILNPLGYYMHYDPSPIMILQPTIQMAEAFSKDRI SPMLRDTPILQDKVDDKSRTSGNTILQKIFPGGHVTMVGANSPSSLASRPIRILLADEID RYPVTAGTEGDPLLLATKRLTTFWNKKIVCVSTPTIKDVSRIEVEYEHSTQGEWNVPCPH CGEYNPLEWAYIKFDKEDLSEIEYTCRHCGAIASEYAWKSNFDKGKFIFKYPRRAVKGFH LNALASLFVSWADIVEKFLVANEEKKKGNIELLKAWTNTEMGQTWEEEGEEIEMEELFNR LEEYGCEVPEEVIVLTAGVDVQDDRFEVEVVGWGEEKESWGIYYKKIYGDLKTETVWQDL DNFLGRTFETKDGRKLKILSTCIDSGGHFTQEVYKFAKKRISRRIWAIKGRGGAQTPYYS KPSISNAYKTPLFTLGVDTGKAILYQRLAVEEPGPNYCHFPEDEGRGYTEEYFKGLTSEK MVISYKKGRAQYVWKLKKGIKRNEPLDIRNYATAALEITNPILKKEIPENPSKPQRNVRS RGLRQ >gi|229269862|gb|GG666049.1| GENE 45 38512 - 39033 504 173 aa, chain - ## HITS:1 COG:no KEGG:Dred_1202 NR:ns ## KEGG: Dred_1202 # Name: not_defined # Def: hypothetical protein # Organism: D.reducens # Pathway: not_defined # 2 172 4 171 183 86 33.0 5e-16 MAKVKLYSTQAIAKLLNISERRVRQLRDEGIIEETMPGLYKLLETNHAYIDYLKGNSKIE ENLNYYEERAKLVKAKRQNEELDLKIRQRDLHETSEIEEVMADMLTNFKVRLMAIPAKLS PVLAGLKDKTKIYKILQEAVEEGLNELSDFPTAFSIESEEGAEIEENTKEEKN >gi|229269862|gb|GG666049.1| GENE 46 39218 - 39964 574 248 aa, chain - ## HITS:1 COG:lin2395 KEGG:ns NR:ns ## COG: lin2395 COG5484 # Protein_GI_number: 16801458 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 111 1 116 246 65 37.0 1e-10 MAKKRRPERDLAFELYRKSKGRLEVKEIAEKIKVKPATISQWKYRDKWDDKLKERRRGGQ FGNKNAEGAGAPKGNKNAETHGGYSSIDLDNLPPEDQAYISSLTLDTETNLKNELKILLA KEKDIRRKLDELDKEPEDRLYLSRESEMQALPTKDLLEKLDPAEREEKMKKLQPTLKTVT RDSKFERQQKLLVAFDRIHGRIIKLLDSIKTYQLDCRRIELDQQRYDLSKEKIKGAFEFD LDGELDEI >gi|229269862|gb|GG666049.1| GENE 47 40173 - 40628 146 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485905|ref|ZP_03916221.1| ## NR: gi|227485905|ref|ZP_03916221.1| hypothetical protein HMPREF0072_1308 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1308 [Anaerococcus lactolyticus ATCC 51172] # 1 151 1 151 151 253 100.0 2e-66 MKDVVEIIDYCREIPQAIKLNRRVINNLEDVFYLPRSNSQLDGMPKAKNHISKITEDLAL SVPDGISETIRSLEEKNKRLDNLYKEILKEIQSLDYREHKVIYDFYIMNYRWEKIARGFY SVRQCKNIRSEALKKLEKKFEKNIYIHNYFS >gi|229269862|gb|GG666049.1| GENE 48 40659 - 40868 269 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485906|ref|ZP_03916222.1| ## NR: gi|227485906|ref|ZP_03916222.1| hypothetical protein HMPREF0072_1309 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1309 [Anaerococcus lactolyticus ATCC 51172] # 1 69 1 69 69 117 100.0 3e-25 MDKKYKTCKFCDNRILVDRKIGVCDECLKMAGAEDEIIGNLQAAEKINFAVEDYIGQAKE EFIKDLIKG >gi|229269862|gb|GG666049.1| GENE 49 40861 - 41385 655 174 aa, chain - ## HITS:1 COG:no KEGG:ELI_3127 NR:ns ## KEGG: ELI_3127 # Name: not_defined # Def: prophage LambdaCh01 # Organism: E.limosum # Pathway: not_defined # 2 165 32 197 198 115 35.0 6e-25 MDNKKALEAYRNLKNNAYGHSLEQGIEYACKHYIDYGLAAVSKTPEPFRVIKKFKGGKFH GQFTARAQPDFQGTLKGGRSIIFEAKYTSTEVIKKKVITDKQAEVLDEHLKLGAIAGVCV GIKNRYFFVPWEVWRDMKKIIGKQSARADDLKRWEIPWRKGVMFLENIKDKLDG >gi|229269862|gb|GG666049.1| GENE 50 41519 - 42337 455 272 aa, chain - ## HITS:1 COG:no KEGG:CLL_A2281 NR:ns ## KEGG: CLL_A2281 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum_B_Eklund # Pathway: not_defined # 9 244 41 259 281 114 35.0 5e-24 MAKTFIREKKIQCGKDYLEVDIYPISENQLEQRKGKRSKKKKVSIPAQKNLNDRNARRKF NQVVETNFGGGGYSVTLTYNEYFLPATVEKAEKEATNYIRRIKRRRKKEGLEDLKYIIVT SSREGKDGKPVRIHHHILMNDGLDRDVVEDLWSRSRGKDKGKRLGFANCDRIKPDTNTGI AGLANYLKGNPTQKRRWTCSQNLERPTERNNDHKYSRKKVIKLALFPESLSYWEKMYPGY EIRDKLYGFEAIYNDFTGWSIYLKLRKKKPRT >gi|229269862|gb|GG666049.1| GENE 51 42561 - 43016 489 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485909|ref|ZP_03916225.1| ## NR: gi|227485909|ref|ZP_03916225.1| hypothetical protein HMPREF0072_1312 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1312 [Anaerococcus lactolyticus ATCC 51172] # 1 151 1 151 151 253 100.0 3e-66 MDREIIKINYKDKRNDRDLLEESKKAARLAALYTEKTLEMEDLNFKQKRYNREINERRRE LKELYIEEAKEIVDGKYRRRRPSIMARVFSPQVIIFCFLSLIVYICLAKLAYIERGYRAI GGEGFFLIFPLLILAFRFGNLVDKDARRRNK >gi|229269862|gb|GG666049.1| GENE 52 43001 - 43534 680 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485910|ref|ZP_03916226.1| ## NR: gi|227485910|ref|ZP_03916226.1| hypothetical protein HMPREF0072_1313 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1313 [Anaerococcus lactolyticus ATCC 51172] # 1 177 1 177 177 283 100.0 4e-75 MAITNKEAKQLLYEERPVFFRNIKYRKISALIYRKSEGTFKASAELLDMNQSCVVICPLE WIEKSEDERIEIFGQEEVERILGECQEEMARLTTLTGQGKPTDSQDSLHKLLQKLVKLDN ELIKQVNAAGEIKEETVAETHEEKEDMENLSSLGGLDEEEGKEDIPQVREEKQWIAR >gi|229269862|gb|GG666049.1| GENE 53 43551 - 44366 833 271 aa, chain - ## HITS:1 COG:no KEGG:MCCL_0956 NR:ns ## KEGG: MCCL_0956 # Name: not_defined # Def: hypothetical protein # Organism: M.caseolyticus # Pathway: not_defined # 180 271 9 100 100 124 64.0 6e-27 MRRLEELKAGEVFKFGKFEWIKLADLDEGVLAITKKHLPVRRRVSEDGNNWKNAELRKWL NINFYNALIDNGASEEDFLFFERDLKALDGQENYGTCIDKISLLSAEEFERYKGLIPFTK DWWRILTPDNKGKNKAYYNCVIGEKKTISCHIPQFIGQVHPICRIRSDKEVEEITITGKI KNWIRDRNLDTADPKGQMLKLVEETGELAEGLAKNRPDQVKDSIGDIYVVLTALSMQLGY SIEDCIEEAYEEIKDRKGRMVNGIFVKESDL >gi|229269862|gb|GG666049.1| GENE 54 44354 - 44650 319 98 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485912|ref|ZP_03916228.1| ## NR: gi|227485912|ref|ZP_03916228.1| hypothetical protein HMPREF0072_1315 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1315 [Anaerococcus lactolyticus ATCC 51172] # 1 98 1 98 98 155 100.0 8e-37 MEDTQKNIEVKRIGFEITEYSANLIHGLLVDEEIRLKEKIPILLAEFDYDFDKTKAYVEE VKTLRKFFTHIDRSEDYLGVFSRIEDYRLDKEEKQCED >gi|229269862|gb|GG666049.1| GENE 55 44816 - 45172 432 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485914|ref|ZP_03916230.1| ## NR: gi|227485914|ref|ZP_03916230.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 118 1 118 118 197 100.0 2e-49 MLMLSIEDKNIFGDLVFQVDSKLYEVMTEIAAGNFEAGQITLKINVSGANKELEIPRSAD DFEIKLFKRPIIDYKVESTLKKTDSTSDYAITEDLAMDIENDKLRISKVDDGQISLFS >gi|229269862|gb|GG666049.1| GENE 56 45159 - 45377 160 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485915|ref|ZP_03916231.1| ## NR: gi|227485915|ref|ZP_03916231.1| hypothetical protein HMPREF0072_1318 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1318 [Anaerococcus lactolyticus ATCC 51172] # 1 72 1 72 72 114 100.0 2e-24 MDTNFKKITFLTKEGTMEISVKKEFHQAACKHDFKKGKIIRPKGKRIFSSRLPKDTTICI KCGKKGGKNANA >gi|229269862|gb|GG666049.1| GENE 57 45367 - 45609 289 80 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485916|ref|ZP_03916232.1| ## NR: gi|227485916|ref|ZP_03916232.1| hypothetical protein HMPREF0072_1319 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1319 [Anaerococcus lactolyticus ATCC 51172] # 1 80 1 80 80 122 100.0 1e-26 MKHDCKGCKNCKCKDRSLKDIKVICQMALGHTYGFTAEESEIKILESNKFNYHIIDINGK IYRIKNLKAEKVKVVASYGY >gi|229269862|gb|GG666049.1| GENE 58 45599 - 46003 456 134 aa, chain - ## HITS:1 COG:no KEGG:CBO2362 NR:ns ## KEGG: CBO2362 # Name: not_defined # Def: hypothetical protein # Organism: C.botulinum # Pathway: not_defined # 3 74 5 77 141 63 45.0 4e-09 MDKYRAWDKLNDKMKGVCCVDWYIKQTVCTEDGEPVYYMDFEDIKLMRFTGITDKNGKEI YEGDILHWKDKSKAGDGSLEENVIVYWSNEFLAWTVQGDDWSVDEPPHYLFEYKDPGEIE VIGNIYEGVLKNEA >gi|229269862|gb|GG666049.1| GENE 59 45996 - 46400 647 134 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485918|ref|ZP_03916234.1| ## NR: gi|227485918|ref|ZP_03916234.1| hypothetical protein HMPREF0072_1321 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1321 [Anaerococcus lactolyticus ATCC 51172] # 1 134 1 134 134 195 100.0 9e-49 MLINVPLLKIADEYEEEGFQIIGDFHDLFILGEDGGLHYLNIQGMVGTRYKELKFKTQYS DIWGEELFEKANFLGLMDLDAKRFRADKDPRYLEIRKAIENYFKEIEEAAKKEEAEMLEE LIGEIEERKGKENG >gi|229269862|gb|GG666049.1| GENE 60 46255 - 46533 70 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSEEERRLLEIIKSFDKAVDALIEKAREIVDKFLEAFRKNKKVRNANKCTTFKNCRRVRR RRLPNHRRFSRPFYSRRRWRPTLPKYPRNGRH >gi|229269862|gb|GG666049.1| GENE 61 46530 - 46688 142 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485919|ref|ZP_03916235.1| ## NR: gi|227485919|ref|ZP_03916235.1| hypothetical protein HMPREF0072_1322 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1322 [Anaerococcus lactolyticus ATCC 51172] # 1 52 1 52 52 80 100.0 5e-14 MRPVTIIYIPYRDFKEKVRLVKEWKKKGYYVEDLGDGIYCMKTKGYKKRGEK >gi|229269862|gb|GG666049.1| GENE 62 46726 - 46992 431 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485920|ref|ZP_03916236.1| ## NR: gi|227485920|ref|ZP_03916236.1| hypothetical protein HMPREF0072_1323 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1323 [Anaerococcus lactolyticus ATCC 51172] # 1 88 1 88 88 106 100.0 6e-22 MKRIEANMNNNEEKKKGKEIMEVKIQKNNKVEEIDKDELKTVAETLSEVEKLPTEKRIAM QYYIKGTLAGLQMMGDNTSLASKEAQAL >gi|229269862|gb|GG666049.1| GENE 63 47004 - 47297 389 97 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485921|ref|ZP_03916237.1| ## NR: gi|227485921|ref|ZP_03916237.1| hypothetical protein HMPREF0072_1324 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1324 [Anaerococcus lactolyticus ATCC 51172] # 1 97 1 97 97 171 100.0 2e-41 MQVLEKTKTPRGIDIQIEDWEENFPEVYGYGDTLAAFPKTITNPDNQVRLEIQFKSYEEA KEALKALEAGEKELRDYRENFNSYSNQGGNVFMNFKE >gi|229269862|gb|GG666049.1| GENE 64 47358 - 47630 321 90 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485922|ref|ZP_03916238.1| ## NR: gi|227485922|ref|ZP_03916238.1| hypothetical protein HMPREF0072_1325 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1325 [Anaerococcus lactolyticus ATCC 51172] # 1 90 1 90 90 146 100.0 4e-34 MKFNRPDNISDNAYLVLEQVCDNYLLNDSVEFEDFSNIDLSLEDMRKAFQELHDKRFVFY HNDLGGEYLYALDRVVYLVRDYQNKYLNKQ >gi|229269862|gb|GG666049.1| GENE 65 47603 - 47884 272 93 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485923|ref|ZP_03916239.1| ## NR: gi|227485923|ref|ZP_03916239.1| hypothetical protein HMPREF0072_1326 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1326 [Anaerococcus lactolyticus ATCC 51172] # 1 93 1 93 93 136 100.0 6e-31 MITSITIASTRDKEKEVESFFYKLFKEKDKDKKKFTYIKLIQRRGDTAHIHYVVNDDLGL DEEEMKKNSFINFIVINKEDKAIPDYCLFKYLF >gi|229269862|gb|GG666049.1| GENE 66 48028 - 48651 636 207 aa, chain + ## HITS:1 COG:no KEGG:Smon_0909 NR:ns ## KEGG: Smon_0909 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: S.moniliformis # Pathway: not_defined # 1 104 1 102 115 84 49.0 2e-15 MNENIKKLRQELGLTMEEFGKNLGVTRSAISNIENGYRNLTEQMILAICNVYNVNEQWLR NGTGDMFVEDTDSLIEKIISDYPLDKLSQTILKTYIELDPKKREIFNYVMKQIADSIMAS SKEQAINGINDVILNSSAPDNIKKDLYGKAAMVFNDSFSYIGNENIEEVEQEELSEKEQY LKMAEEQYDKEKEQELKASSAKESDVG >gi|229269862|gb|GG666049.1| GENE 67 48729 - 49748 466 339 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485925|ref|ZP_03916241.1| ## NR: gi|227485925|ref|ZP_03916241.1| hypothetical protein HMPREF0072_1328 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1328 [Anaerococcus lactolyticus ATCC 51172] # 1 339 5 343 343 638 99.0 0 MIKGRCKFLKDWPDWDINIHEQEAQIERQGRSIHYPFTFTIDKAKKVGRFSSTSVLPYYD TSLSSCTCFDFQERKLPCKHIYRLAVELGYIEIINRPSFDKKAVEEIRSSDDIDAAPDQV KRQKSALKCKPIEIDFENKCGTFKGSGKNPYHTTLNDCTCRDFTVRNLPCKHIYRLRMEL ENPTSKKELQENLNSEFEKDYGKDLLRKLSQEAATAYIYSISFDWSSSSKIKEDILNELV KSELVEISKDLPITLKFLQKKDLFLICDEFDVQYKRSFSKSSLISAIINGLDSNNTNNLM EKLPFSIRRNIKAENIFGSIKYLYHKLYPTDYSEYTVDF >gi|229269862|gb|GG666049.1| GENE 68 49884 - 51251 920 455 aa, chain + ## HITS:1 COG:SA0057 KEGG:ns NR:ns ## COG: SA0057 COG1961 # Protein_GI_number: 15925764 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Staphylococcus aureus N315 # 5 445 8 493 542 120 26.0 8e-27 MEMVRAALYIRVSTEEQVREGYSVDAQKENLIRYAKFKGYTVVDIYADEGITARKKYTNR KEFMRLLDDVEADKIDIILFIKLDRWFRNVGDYYKVQEILERNGVGWTATTENYDTTTAN GRLYVNIRLAVAQDESDRTSERIKFVFDKKIKDGEAIWGKPPFGYKIKNKILVKDEEVEG FINECFESYKVLRSINAVAKTMNQKHNKKISYTTYSRFLRKNLDFYKGKYKDNENYFPPY LSEEDYEEILAINKARSGRFGGKTYNYIFVGLLACACCGYNMGSAGYTTNRRTNQKYRYY KCGRSTVKVCENNLRIQEKKIENYLLENIEDEIRKYKVVYKIEKSEPISRPVAAKNNIKN KINRLRKLYLEEVIELEDYKKEYEVLQKQLDQVEEEIKTHKRFQKKDFSALDKLLQSDFE EMYNNLDNLQKRALWQSVISKIYVKGSEIVKIEFK >gi|229269862|gb|GG666049.1| GENE 69 51286 - 52173 1056 295 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485927|ref|ZP_03916243.1| ## NR: gi|227485927|ref|ZP_03916243.1| hypothetical protein HMPREF0072_1330 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1330 [Anaerococcus lactolyticus ATCC 51172] # 1 295 1 295 295 536 100.0 1e-150 MKKFLWILALALCLSACGNEVDKANDGAKGVSQVNEDKAKDDEKVSDDKKAKEAEDSSVQ ASLKEDDFFFSNHDLVTVKDGEIVNVIKYVKKLGDDTYTYPVPLSDDVFLFGINGDNSST LMKINGKDFEEIYKIEGQEFLPSAMVGDKVYGHFMGDTDLNKFGYLYAYGEIDLKTGKTN IFEALKIKKENEFLQSIGFTDKEILYNKLDLPGDFLVTMYRLDLTKGYDQEPEKVKDVEG FTWLSSVKYDKDGKEIYDILDLDFDDEGKCYINGINCPTEEGTEFVSAGPNGVYK >gi|229269862|gb|GG666049.1| GENE 70 52357 - 52542 124 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQVGLYFRDELTKTSGNLSINRCFICVIHAIFFCFLKSIRFSIFLKGGLVQAFASGEFVV Y >gi|229269862|gb|GG666049.1| GENE 71 52710 - 53033 402 107 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485929|ref|ZP_03916245.1| ## NR: gi|227485929|ref|ZP_03916245.1| hypothetical protein HMPREF0072_1332 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1332 [Anaerococcus lactolyticus ATCC 51172] # 1 106 13 118 118 202 100.0 5e-51 MENRTVKISFLVADDDLKNGDAKLVDFLEKEGFSQHNPSGYSPICPWIFVDLNQKLYGRA RIGVKFGTIIGDHAIKEEEFYTIYKIYKQYEGKELFTFKKERFDYND >gi|229269862|gb|GG666049.1| GENE 72 54008 - 55642 961 544 aa, chain + ## HITS:1 COG:no KEGG:mru_0024 NR:ns ## KEGG: mru_0024 # Name: not_defined # Def: hypothetical protein # Organism: M.ruminantium # Pathway: not_defined # 13 269 5 241 252 110 30.0 1e-22 MKKEHITGDNSHGFSNEKELVNALNEKTLKNLNTHLKRFIQQICEDYSISNNNMTIKAYI ATRQVDPYTNKKINVKPDFYIEIGNQQFGISTKMGSGNSVHQESVDSFISWIRNNKNIII ADESIYNCLKLLIWGDGTLNGSAPVIKDSYGFVIGRYSTREFKNLYPKEHKIIQNFLNIN AKEIIKRALFLGKTNNEVNYIYHGTSINGIWISQKDILDYNLNYCLNSNTFNVGRMSLQI YNADKKGTESGASKRGNIQFKYGTLEEDIQTLMLSKTSNIGTYEGNLEEFNFSKMMNKNK NHKFWSFINTKLNLKKYGNYYIIKVEGHKYSRNAKKKVMCKSDNYIIETKNPLNKDFMLK NEYQLTESDLANISNYKIIPNSGISVKQVNSKKYTLTKLTVPNFISAFKDYLENTSYLCA TMIFYCTENKVNENSSIAKNLNIDEIKFIEFAKSKFNITVRSLLDYESLKILKKSTKELL EKTIENNKKLKQALFTGKGWFDDPYFINFIYRNGSLTDEYYPPYKIDNGSGRSKGKYTII IKPI >gi|229269862|gb|GG666049.1| GENE 73 55672 - 56628 828 318 aa, chain - ## HITS:1 COG:NMA1500 KEGG:ns NR:ns ## COG: NMA1500 COG0270 # Protein_GI_number: 15794400 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Neisseria meningitidis Z2491 # 2 314 20 331 337 220 42.0 2e-57 MYKFIDLFCGIGGFRIAFENLGCKCVFSSDIDVYARETYNDNFGEYPAGDIIKVDAETIP NHDILCAGFPCQPFSIAGKRMGFEDARGTLFFEVARILKAKRPKAFILENVAGLVSHDNG NTLGTIINILNELDYKVVWKLLNAKNYGIPQNRNRWYCVGVDKNHKELNLDDVFPGICEL RYTLKDVIDCEYKEDYQISQIARNNIEKHIGLYLEKNQLTFIDEEPIIANNIRSSKVSFS SSGISPCLTAKMGTGGNNVPVIVDLNRKLTTEECLKLMGFPDTFKIKPNYSQSYKQIGNS VVVPIVESIGGRLLKLIN >gi|229269862|gb|GG666049.1| GENE 74 56630 - 57706 782 358 aa, chain - ## HITS:1 COG:BS_mtbP KEGG:ns NR:ns ## COG: BS_mtbP COG0270 # Protein_GI_number: 16079084 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Bacillus subtilis # 4 358 3 438 443 186 30.0 4e-47 MNKEIKIASLFSGVGGFEEGLRLAKIDFDLVFASEIDRFAQKSYSSNFDTDNLYGDITKI NEKNIPDHDLLLAGFPCQSFSIAGKRKGFEDTRGTLFYDVARILNEKKPKLFLLENVKNL ISHDSSRTIKQMLKILNDLNYTVDFTIINSVESGVPQNRERTYICGIYNFENDKYLPDSR NFKVNKLKEKLNKSNFNGFNFFNSLIFDSKQIYIEDIIDKSVDTKYYLDNPKLNEYINNY NIDYGIENEKRIIKILDIPREIHNDLERQRRVYSIKGISPTILARSDSAKIMVMKDGEYK IRKMTPDENFSIQGFDKKFIKNIRKSGISDTQMYKQSGNAVSPPVIAGIVEKLIEEYM >gi|229269862|gb|GG666049.1| GENE 75 57721 - 57906 120 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485933|ref|ZP_03916249.1| ## NR: gi|227485933|ref|ZP_03916249.1| hypothetical protein HMPREF0072_1336 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1336 [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 97 100.0 3e-19 MKCDSNLIYLDTYVLQKDMRIRLPKNIVENLQVKEGITEFKIYCDVKNLQLILKKVDCNK N >gi|229269862|gb|GG666049.1| GENE 76 58284 - 58478 56 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSFVHSGPEFMRSLVSYNHSHSMEKTMEYYTLNIVLWNVYEVPIALTIATRLQPHNYVF LLIS >gi|229269862|gb|GG666049.1| GENE 77 58560 - 59729 926 389 aa, chain + ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 388 1 389 391 246 38.0 6e-65 MIYLGIDVSKFKHNCYLADENNFDKGGHFEIKNSKDGFEYLLRKLSDFDKDKIRIGLEST GHYHLNLSRFLLDLNFNIHFFNPYQTSLYRKADSFRNTKTDKVDAFFIAKLLRATDSNPT HNELYHNYELKSLTRYKSSLKNDRIKLKNAIVGYIDLIFPELAKVCKDVFCKYTLEVLKE HPSADKIAKANLTRITNLIKKASNGNNSKERAIEIREAARKSIGINSPAVSFRLVQDIKA LEFLIEQIDEVNEQIKLLLNEMDNPIMTMPGVGIEIGPSLIAEIENIDNFVSPSKLLAYA GLDPSINQSGTMNSSYSSMSKRGSSYLRDALFLAAFLICQNDETFRLYYEKKKSEGKHHY VALTHVARKLTRVIFHLLKTNQKFISQKN >gi|229269862|gb|GG666049.1| GENE 78 60006 - 61403 1247 465 aa, chain - ## HITS:1 COG:no KEGG:Apre_0187 NR:ns ## KEGG: Apre_0187 # Name: not_defined # Def: peptidase S41 # Organism: A.prevotii # Pathway: not_defined # 5 463 3 462 466 505 55.0 1e-141 MRRLRKYLLATFFVALMLISTSCVKRRMAYLERKKLAKENTGKTMDTHTGVFYPENITDF SVDEYLKWYKDLKEPPHLQLASFENPKKLTNAEMVGDFEYLFKELKESYPFFGVLKRKYE VDFLKNHDAYLKKVRACKNDGEFIKVLNEVMADLHNYHAKIADSAYVDQTLKYYSQNWNQ PSIYYEFLNLNRQVVRNRYGLEGVQSQSASASVKRKQEKKSKGDSKANISLEDHGDLAIL KISQMGDMNNEKDQKVLDEFLRNKHMYKALVIDIRNNVGGNMEYWQSFLLPKLTKNPKQV INHMFFKDSAKTRLLLQDNTLNMENLSNVDITGIRLDHAEDLKDFAYYIKDTITINPDET KRDNGYEGPIFLLVDENVFSAAEGFASFIKHTEFATIVGTQTGGDGITLGVINSVLPNSG LVFTYTNTLGYDPSGEINEEDPTKPDIESASYRQSIETIENMIEN >gi|229269862|gb|GG666049.1| GENE 79 61390 - 61737 212 115 aa, chain - ## HITS:1 COG:no KEGG:Apre_0186 NR:ns ## KEGG: Apre_0186 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 111 1 114 117 77 37.0 2e-13 MRKRKKITDLKKYNKINLASSIIWILVGIGIIGFGFYYKEILEKIFGFLAIIIGISSISV RKKPTVIKRYEDRRLFVLAGLLVIYSLVNPLGNIAIIFDIFKRDFAMRRDFNEKA >gi|229269862|gb|GG666049.1| GENE 80 61739 - 62749 855 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 7 321 520 841 860 333 51 7e-99 MKDFYTLAIETSCDDSSVAILKNEREVLTNLISSQIDIHALFGGVVPEIASRKHLEAINP LIDKALEEANITYADLDLITVTKGPGLIGSLLVGISAAKALALATGLPLVGANHMKGHIC ANYLSNKDLKPPFVCLVVSGGHTYLCKVKDYNDIEVVGSTRDDAAGESFDKVARKIGLGY PGGPKIDKLAKKGNPKAIDFPRVMLEKGSYDFSFSGLKTAVLNYAHNEEQKGEEINKADL AASFQDAVVDVLVEKSLMLLEETGYKQFAISGGVAANSRLRARMEEELAKRDIKFYYPDL ILCTDNAAMIAMAGYLDYKDGVRDTTFMKVYPNLDL >gi|229269862|gb|GG666049.1| GENE 81 62746 - 63183 515 145 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|228002792|ref|ZP_04049785.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Anaerococcus prevotii DSM 20548] # 1 144 1 144 146 202 64 6e-51 MIRKMNLEDADRVYQIENESFFEPWSKKRLLKEFEENSFLKHFVYEKDGKVIGFYIISCI SDLVEIFTIAIDKDYRGQGIGSELLEHLIQVAKDNGAKEIWLEASTRNEAAVNLYQKYGF NIQSTRKNYYQKTGEDAYNMIRTLL >gi|229269862|gb|GG666049.1| GENE 82 63180 - 63842 207 220 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|238855674|ref|ZP_04645973.1| ribosomal protein ala-acetyltransferase [Lactobacillus jensenii 269-3] # 42 220 1 186 380 84 32 3e-15 MIYLAIDTSTMISTVTVADDKEIIGDFNVNQSKTHSESLVPMIENLLDLLGMKVADVDKF VIADGPGSFTGLRIGMTIAKTLAQVEKKDLLTISTLKAMAAGSISQRAKLALIDARATRV YAGLYDQNLEQIIPENLYEIDDLAKIVNEKGLEIEMIGLLNDKYFDKFERAFKAPINLNN CIGKNLIRLAQEEGLEARPLYEISPNYLRKSQAEREFKKK >gi|229269862|gb|GG666049.1| GENE 83 63823 - 64269 396 148 aa, chain - ## HITS:1 COG:CAC2838 KEGG:ns NR:ns ## COG: CAC2838 COG0802 # Protein_GI_number: 15896093 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Clostridium acetobutylicum # 2 145 4 150 152 90 33.0 1e-18 MVIENLNDLEKFAYSLAPLLKEGDVINLIGDMGAGKTTLVNSLARFFNIYDSSSPTFAIV NIYDGDIRIYHLDLYRFESPDDLLDIDFETYFYPESAITFLEWAENGEGYLPDDMINIRI DKLGPSTREITILNDTERAKEINDLLGN >gi|229269862|gb|GG666049.1| GENE 84 64413 - 65006 777 197 aa, chain - ## HITS:1 COG:CAC2841 KEGG:ns NR:ns ## COG: CAC2841 COG3601 # Protein_GI_number: 15896096 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 5 194 2 192 209 155 44.0 4e-38 MNKTKSISLNNVVKIGILSALAFILMFFQVPIPIAPPFMRVDLADVPALVGGFAMGPWAG VAIQLVKNILNLTKTQTVGVGELSNFIVGASFVFVAASIYKNKKTKKTAIFALFCGVIAM TAIATLSNAFVVFPAYGKAMGVDLNAFAGQVPGNPLVRSYVSLMLFSIVPFNIVKGTAAA FVTDLIYKRVSPILKLK >gi|229269862|gb|GG666049.1| GENE 85 65253 - 65912 670 219 aa, chain - ## HITS:1 COG:STM0397 KEGG:ns NR:ns ## COG: STM0397 COG0745 # Protein_GI_number: 16763777 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Salmonella typhimurium LT2 # 2 212 4 226 229 62 22.0 6e-10 MRIASIENENGVSSLINSHFDKNEVVVEKIESMDELLFKDCSIYDLILVDMTHNRCLQFI QYIKQKMNIPVIYLTERYQKNPYEQELDDKDFVIHSYTREEFIDDIFNKVEELSKSEVID LGACTLDEANGIFKVGNKILDLTRSELEICSILIHNMAKILSKEDIVEEMGKRNLATTPR SVREHIRKIRVEFKKADLEPIDTITAKGYRWALESLTRK >gi|229269862|gb|GG666049.1| GENE 86 66253 - 66942 962 229 aa, chain - ## HITS:1 COG:PM1506 KEGG:ns NR:ns ## COG: PM1506 COG0588 # Protein_GI_number: 15603371 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Pasteurella multocida # 4 229 2 227 227 314 67.0 7e-86 MTKKLVLVRHGQSEWNLANKFTGWVDVDLSDKGVEEAKEAGRKIKEAGIRFDHAHTSVLK RAIKTCNFVLEYSDQMYVPQSKTYRLNERHYGALQGLNKAETAEKYGDEQVHIWRRSYDT LPPEISEEEKEKQAHLPMFAHLPKDVIPGAENLKVTLERVLPYYFDSIAPELLEGETVLV AAHGNSLRALAKHLEKISDDDIMDLEIPTGQPLVYELDDELNVIKKYYL >gi|229269862|gb|GG666049.1| GENE 87 66942 - 67991 1233 349 aa, chain - ## HITS:1 COG:CAC2858 KEGG:ns NR:ns ## COG: CAC2858 COG1077 # Protein_GI_number: 15896112 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Clostridium acetobutylicum # 8 328 9 333 340 287 47.0 2e-77 MSRFRRSVAIDLGTASVLVFINNKGIVLNEPSVIAIDVLSDEILAVGSEAKKLIGRAGGN VSCIMPMREGVIADFKATERMLDYFLNKSVKKSLFKPDLLICVPARSTQVEKRAVIQAAE NAGAHRTYLIEEPLAAALGAGVDITDPKGTMVVDVGGGTSDIAVISMGQIIASRSVESAG RSFDRIIKDMIRSRYGLLIGDTSAEAIKEAADSLGPEDSFEVKGRNVTNALPAKVYIPVS ELKDALRGEIDKVVEGIKKVLEVTPPELASDIFDREIILTGGASNTIGLKDRIEEKFQIR VKIAENPQECVIKGTAKALNWIDSLDENRNEAMKAKQEEKEAFEKLRRR >gi|229269862|gb|GG666049.1| GENE 88 68960 - 70132 1818 390 aa, chain - ## HITS:1 COG:TM1658 KEGG:ns NR:ns ## COG: TM1658 COG0192 # Protein_GI_number: 15644406 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Thermotoga maritima # 1 389 1 391 395 478 61.0 1e-134 MRKFITSESVTEGHPDKVCDQISDAILDECLKQDPKARVAAECITTTGLVLVVGEMTTEA YVPIEEIVRQTIREIGYCDPSLGFDYENVAVLTSINSQSPDIAQGVDKASEYDASHDDYD KIGAGDQGMVFGYADDETEVYLPMSVKLAQDLAKRLATVRKEGIIDYIRPDGKSLVTVEY DDDTLVRLDSIVISTQHKDGIPMDQIRKDVIEKVIKKVVPAKLLDDKTKIFVNPTGKFVI GGPKGDSGLTGRKIIVDSYGGYSKAGGGAFSGKDPTKVDRSAAYMARYAAKNMVAAGLAK KLEIGVSYAIGVARPLAIFVDSFGTGKYDDEKLKQIIEENFDFRPQAIIDKLDLRRPIYK KTAAYGHFGREEKDGFSWERLDKVQDLKRY >gi|229269862|gb|GG666049.1| GENE 89 70125 - 70604 648 159 aa, chain - ## HITS:1 COG:CAC0434 KEGG:ns NR:ns ## COG: CAC0434 COG0245 # Protein_GI_number: 15893725 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Clostridium acetobutylicum # 1 154 1 154 155 169 58.0 1e-42 MRVGIGYDVHKLVKDRDLILGGVKFDYDLGLLGHSDADVLTHAIMDAILGALALPDIGNL FPDTDPAYKDIYSIDLLDRVVEKMFEKGYKIGNLDSVVICEMPKVAPKREEIVNLLASHL KTDQANVSVKASTSEKLGFTGRGEGIEARAIVYLEEINA >gi|229269862|gb|GG666049.1| GENE 90 70601 - 71302 305 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 9 230 6 224 234 122 35 1e-26 MYKGKFLSAVITAAGSGTRMGLEINKPYLEIGSKKILELSLTTVTSIEEFDEIILVIREE DFSLATEILSLFRDPRIKMVAGGASREESTYNGLIALNPDSDLVLSHDGVRPFASRGLFL RVLKEMETYKAAISATKSKDTVKVANENGEVDFTPNREFVYNIQTPQGFDTRLIKSLYKK YFESEAKITDDSQLFEFFDRDEPVKIVEGEYSNIKMTTTEDIIFAKAFIKGER >gi|229269862|gb|GG666049.1| GENE 91 71295 - 72392 798 365 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764768|ref|ZP_02171822.1| ribosomal protein S5 [Bacillus selenitireducens MLS10] # 1 365 30 393 397 311 44 1e-83 MKRVIRLVFILIGAVLGIVVFGIVNAAFGFVPNSGKLILWAKVISSALFALIFYFATDPI AKRATASLSIFEKRVSKLPAANLVIGVIGIILGFLIATLVSTPLTKLSLPFMGNSFFVLL SILLYIGFGYLGWKLAYKNSEDLLALVTRSKEIKKDGGEFFDRSNLTASPKVLDTSVIID GRILDIINTDFLEGELIVTEFVLEELQHIADSPDDLKRERGRRGLDIMNKIKESKKIKLT VLNKDYKDIKEVDAKLLKLALDLGAKVFTNDYNLNKVADVQGIPILNINDLANSLKPVVI PGEKMEIEVIKKGKGKNQGVGYLEDGTMVVVEDGQDLIDQTIKAKVTSVLQTSAGRMIFV RAEDV >gi|229269862|gb|GG666049.1| GENE 92 72415 - 72894 660 159 aa, chain - ## HITS:1 COG:ML0320 KEGG:ns NR:ns ## COG: ML0320 COG1329 # Protein_GI_number: 15827084 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium leprae # 1 158 5 162 165 125 38.0 3e-29 MFKVGDKIVYPMHGAGVIDAVEKIEFMGEEREYYILKMPIGEMDISIPADNMKDANIRFI ISKEEGLEVLAILDDKPTEMNSNWTKRYRDNQEILKTGDIFEIAKMVRNLAILDSDKGLS TTEKKLLNRARRILASELVMAGSLEKEEAEKMIDESIGL >gi|229269862|gb|GG666049.1| GENE 93 72987 - 73883 1014 298 aa, chain - ## HITS:1 COG:BH0676 KEGG:ns NR:ns ## COG: BH0676 COG1597 # Protein_GI_number: 15613239 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 1 276 1 275 295 171 34.0 1e-42 MKKILFIYNPNSGQRAINDKLSWIIEYLSSKSIFPTVYATQKSGDCREIVEKYGKDFEEI LISGGDGTLDEAVSGALKADIDPIISYIPTGSTNDFSKTINISSDIEKATKTAVRGKVKR IDVGKIDDKYFVYVAAFGALSDISFSTDQDVKNILGRSAYIVEGIKQLLPIQSMQSYKAE IEFDDELIKGEFIHFMVSNSVSVGGFNLFDDKVGLTDGVFEVTLVKKPESIVDLNTIIQS LTTGESSDLVIQRQVKKIRIKTEKEVSWSLDGEFGGKTTDCTIEVIGKRINMKTGIID >gi|229269862|gb|GG666049.1| GENE 94 73958 - 74590 699 210 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485951|ref|ZP_03916267.1| ## NR: gi|227485951|ref|ZP_03916267.1| hypothetical protein HMPREF0072_1354 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1354 [Anaerococcus lactolyticus ATCC 51172] # 1 210 1 210 210 387 100.0 1e-106 MIKSLLILALLALTGCVGANPHQDISQNQESTKQASDLKQIKDLFYEKLKGQTLTRTYGE NTGQTKVIFENDGTFRGDYFGKIASDGKDYGLTDKAWLYYHGEEIHSSEFEGAFEITGAI DEYTYELSLKDFKITSKLGAYDDIYYHVDFALGLNPEASYLLYRPGCPIKDLEKNDRLIE IAKNGSPDGKKTRGFIIFNKTDGEIFSQKP >gi|229269862|gb|GG666049.1| GENE 95 74587 - 75126 509 179 aa, chain - ## HITS:1 COG:no KEGG:Mrub_0214 NR:ns ## KEGG: Mrub_0214 # Name: not_defined # Def: hypothetical protein # Organism: M.ruber # Pathway: not_defined # 12 174 13 176 181 174 50.0 1e-42 MENHDKEFIDKLEKRFKENMDRHPSIKWDFVKSSILNDPDLYDAIYAMEETGGEPDLVDL EIFKGLVYVDLADKSPTGRRSLCYDKKARQARKENPPASSVEEEIGEFGIKLLSEDKYIA LAEIATFDTKTTSWIKTPEDIRAKGGALFAGRRFDRVFVYYNSPESYYKDRGFRVYIQI >gi|229269862|gb|GG666049.1| GENE 96 75126 - 75383 255 85 aa, chain - ## HITS:1 COG:no KEGG:Apre_0209 NR:ns ## KEGG: Apre_0209 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 79 15 94 111 85 51.0 6e-16 MIDLYYDKHKDEDHERAGLKAYAAKRLALCPHGDDKPFCSSCKIHCYDKNHRTMIKKVMK YAGPRMIFYAPGVALRHLLENIRRN >gi|229269862|gb|GG666049.1| GENE 97 75419 - 75709 547 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485954|ref|ZP_03916270.1| ## NR: gi|227485954|ref|ZP_03916270.1| hypothetical protein HMPREF0072_1357 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1357 [Anaerococcus lactolyticus ATCC 51172] # 1 96 1 96 96 132 100.0 9e-30 MLEAKNDNKDRNDIDIKDNTAGTVGFDPKTGRVFYVDEPQKAPTPKPSLDDEMGDLAKEL NESTDAIMDLLKEAGIENPTDMEALKKLAEAEADDE >gi|229269862|gb|GG666049.1| GENE 98 75812 - 78631 2534 939 aa, chain - ## HITS:1 COG:BH3594 KEGG:ns NR:ns ## COG: BH3594 COG0178 # Protein_GI_number: 15616156 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 5 939 4 939 957 1190 61.0 0 MKENNNIIIKGARTNNLKNIDLTLPRDKMIVFTGLSGSGKSTLAFDTIYAEGQRRYVESL SSYARQFLGGIDKPDVDSIEGLSPSISIDQKTTNRNPRSTVATVTEIYDYYRLLYARIGE AFCPVCGKPIVAQSVDQMVDKIMELPEGTKIQLLAPVIRGKKGQHKNALANIRKDGFVRV IIDGERYEIEDDIDLDKNKKHDISVIVDRIKMKEGIESRIADSLETVIGLADGLVVVDVI GGDQMLLSSKLACPEGHVSLPEITPNMFSFNAPIGMCPECNGLGFHLQVDPDLILPDRSL SINAGAVDPYNGSAKGTYYYEVVRAIADHYNYSYDEPLEDAPEGLVNDILYGTDYDLSFV FDSHFSGKKRYKGIFEGAIQNIWDRYQRTNSDSQKKKFEEYMGEEECRVCHGDRLKPEVL SIKVGDKNISELTRLSVAKSIEFFEKLKLSEMKAQIAELIIKEIKGRLRFLNDVGLSYLT LNRTASTLSGGESQRIRLATQIGSGLVGVSYVLDEPSIGLHQRDNDKLIKSLRNLTDIGN TLIIVEHDEDTMRAADFIVDIGPRAGIHGGEIVAKGSLEDIMASKDSLTGDYLAGRKKIE VPKKRRKSDKFIEVIGAAENNLKDIDVKFPLGILTTVTGVSGSGKSSLVNEILYKMATRK INKSKIHAGAHKKIKGLDQVDKVIAIDQSPIGRTPRSNPATYTKVFDAIRDVFAMTNQAK MKGFQKGRFSFNVKGGRCEACKGDGTIKVDMMFLPDVYVPCEVCHGKRYNRETLDVKFKG KDISEVLDMTVEEGIEFFENHPAIVRKLQTLYDVGLGYIKIGQPSTELSGGEAQRVKLAT ELAKVSTGQTLYILDEPTTGLHTADVHKLIEVLNRLVDQNNTVVVIEHNLDVIKVSDYII DLGPEGGDGGGNLVATGTPEEIAKVKASYTGKYLKKLLK >gi|229269862|gb|GG666049.1| GENE 99 79688 - 81643 2590 651 aa, chain - ## HITS:1 COG:BS_uvrB KEGG:ns NR:ns ## COG: BS_uvrB COG0556 # Protein_GI_number: 16080570 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Bacillus subtilis # 3 648 5 658 661 830 66.0 0 MEFKLKSDYAPKGDQPEAIKKLSEGILAGKKHQILRGVTGSGKTFTMANIIQNVQRPTLV LAHNKTLAYQLFTEFKEFFPDNAVEYFVSYYDYYQPEAYVAATDTYIAKDSSINDEIDKM RHSATMALFERRDVIIVASVSCIYGLGDPIEYKKLVVSLRPGQEISPEEVMKKLIDVQYV RNDVEFERGSFRARGDVLDIYPAGFDQKAIRIEFFGDEIDQISEFDPLTGKVISKITHAY IYPASHYATTSEKTEKAIISIEKELEERIKEFESENKLLEAQRIEQRTKYDIEMLKEIGF CSGIENYSAHLSQRPRGSRPYTLIDYFPKDFVLMVDESHVSIPQVGGMYEGDRSRKQNLV DFGFRLPSALDNRPLKFDEFEKLINQTVYVSATPGPYEMKKTHGELVEQIIRPTGLLDPL VEVRPTANQIDDLIEEVHKTIEKGERVLVTTLTKKMAEDLTDYLMEQSIKVRYLHSDIKT IERSEIIRDLRLGKFDVLVGINLLREGLDIPEVSLITILDADKEGFLRSETSLIQTIGRA ARNSEGHVIMYGDTITGSMQRAIDETERRRKIQEDFNKKHGITPTTIKKNIGEIIQITKK AEEEEIEEFKREDIATILINMESEMYKAAEELDFERAARLRDQIKKMRENF >gi|229269862|gb|GG666049.1| GENE 100 81912 - 82460 702 182 aa, chain + ## HITS:1 COG:CAC2928 KEGG:ns NR:ns ## COG: CAC2928 COG3859 # Protein_GI_number: 15896181 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 5 160 40 186 210 129 42.0 2e-30 MNNSKWSTKMIAEAGVMLALAFILGRIKLFELPQGGSVTAGQMIPLIIFAIRHGAGPGII VGAVYGVLDMMFGGSIYHPVQAILDYPLAYASLGLVGFFAKNFASNHEIAPVIKGTFLGV FARFVCHVLTGVIFFGSYAPEGQNVWLYSIIYNGTFLGVEFIITIIIIFLLKNLITKDLA RL >gi|229269862|gb|GG666049.1| GENE 101 83381 - 85021 1284 546 aa, chain - ## HITS:1 COG:no KEGG:Apre_0167 NR:ns ## KEGG: Apre_0167 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 546 1 543 543 304 36.0 6e-81 MNKDFRTYILAEKIALTESFNMMVYGIRKFPLIGKKLGDKYRFFEFKEIMYSFYPIFVLI KQILGCALSFLIAYLYTTITYGWIYKIFGGEIFAADLASKAELTSYLMGLMIPVILYFAT GIFRNFIYDNGAGIGKYYYQYHIDPSSSAKMFLYYKPAMRLIGRTLIFAIFFSLINKIPL IYPILMSFAVYFLEIGASVFWMKYKLKHKKGILDNGLLQVAFIILIPVLAMGLVITGSFD LRIATGIIFIFSLALFIYGVTSLKSFKSFDQVIEDSIEEYEVGGEELDLSEAKNYELKDK DIEVKNKKGLYQKKGLAFLNSLFFIRHKRLITKPVIIKSLAVPAIALGVFFFTVFKETLG AEDIFELTIRAMPFLMYTLSRQDKVITAMYLNCDQGLLPYGFYRKGTMLLAMYRLRFRSM LAINLIPATAVFATYMAAVAYKGGIFWVNNLVVLAYILLMTTFFTSLALAKYYLLQPYNQ EGMSVSKIAGVINMVVYYICIYGAFIVKDMDYKMILLTSGSFILAFIIVVNILIVRFGSK TFKIRD >gi|229269862|gb|GG666049.1| GENE 102 85014 - 85739 188 241 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 3 208 5 214 305 77 29 5e-13 MKLVIENLSKSFDDKEVLKDASYDFEKGTVYALLGRNGAGKTTLFRLITEAIKKDAGEIY IEENGEKTPVSFDDVFMMVAEPDLPKFLTGYEFIRFFIDANRENIKDLKDIDYYLDLVDF DEEDSHRLIQSYSTGMKNKIQMIMFLILKPRIILMDEPLTSLDVVVSLQMKKIIREIHKD HIMVFSTHILQLAKDICDKIVLLSEKKLSGLDDSYLADPDFEDKLISILAGNKENLGEIH E >gi|229269862|gb|GG666049.1| GENE 103 85880 - 86239 489 119 aa, chain + ## HITS:1 COG:lin0743 KEGG:ns NR:ns ## COG: lin0743 COG1725 # Protein_GI_number: 16799818 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Listeria innocua # 1 106 1 106 125 93 45.0 8e-20 MDFDNNRPIYIQLVEDFKIKISTGDWQAGDKIDSVRNLATTYKVNPNTIQRALAELEREG LCESQRTIGRFVTKDEKKIKSLSNKAFTSFADDFISGMESLNIKKDVALSDLRDYWEEL >gi|229269862|gb|GG666049.1| GENE 104 86236 - 86919 209 227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 2 211 12 230 318 85 28 2e-15 MIEIKNLSLKYGGRKVLDDFNLNLDKGKIIGLVGENGTGKSSLMRVIAGLEKNYSGEVLI DGNKPGGKTNALISYQPDHLPFDDFMTVIDIGNIYERFYDDFDSESYYKMIDSFSIKRSL KIKECSKGMKDKVQIAATLARKSEIYLLDEPMTGIDPKARFEMLNTIIENFNLESTLIIS THLISEIEKILDEVIIISDGKVLAHKAVDEIRAEKGLSLEEYFREVL >gi|229269862|gb|GG666049.1| GENE 105 86919 - 87713 905 264 aa, chain + ## HITS:1 COG:no KEGG:Apre_0171 NR:ns ## KEGG: Apre_0171 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 264 1 254 254 99 28.0 1e-19 MGKLFRQIFKEDIKKVIVWMLSPLLIAILGNFVYKLTDFRPISLIIVLSGSVMTFAPLIS LASINDSDNNRFYGKKAAFYTTLPFTAREITGARLINYLIMGLVIGVFSIFNFLLIGLTS DGGLKPLDILKYIGESINLNIFISLVKYIIIIALFYAIFALIIMAANTLGASRPFNKMGR SAKLVLFVALILFQGYVYVKLISGLENTSLIKFKEYSTSAGKFSINMLDLNWSSFAIIVL ILAIFALAYFALTNYFHKEKISVE >gi|229269862|gb|GG666049.1| GENE 106 87724 - 88347 846 207 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485965|ref|ZP_03916281.1| ## NR: gi|227485965|ref|ZP_03916281.1| hypothetical protein HMPREF0072_1368 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1368 [Anaerococcus lactolyticus ATCC 51172] # 1 207 1 207 207 344 100.0 2e-93 MFKKLVIGLVFLVVAFFVFIRFAFLPTPEFLRNQEVDGVKVEIRISDDERKPIIRTYTKE EFDAFDQAKIENINDDVDGRVEGDIPCIHLLEDNKIYITFYKDGEKIEPDDAHIKITTYA SDYRDPTKTRHIEGKLTDEGDKTYTYATKRYSVQYEKYFFEYLRMEITYTINGKDYVSIF GTFQDNAPVDTDFFENEDLKKPLDPEE >gi|229269862|gb|GG666049.1| GENE 107 88382 - 88711 236 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485966|ref|ZP_03916282.1| ## NR: gi|227485966|ref|ZP_03916282.1| hypothetical protein HMPREF0072_1369 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1369 [Anaerococcus lactolyticus ATCC 51172] # 1 109 1 109 109 209 100.0 5e-53 MGWFTINKFIVFCLLIVLAGCGKEEKYTKQDIPTRPGTGIKLKDEIGIGLSYKVIKDAKI YTDPDEKTAFDTLEKGSVVQASQEEENGFAYVTYQGQSFYIEVKNLQGI >gi|229269862|gb|GG666049.1| GENE 108 88689 - 89834 1565 381 aa, chain - ## HITS:1 COG:no KEGG:Apre_0165 NR:ns ## KEGG: Apre_0165 # Name: not_defined # Def: lipopolysaccharide biosynthesis protein # Organism: A.prevotii # Pathway: not_defined # 1 381 1 386 386 222 39.0 2e-56 MRKVTTYQLIDGIKKNLALIIVPAIVFFGIVFGLGIKKVGGSFEASAVLIATAGEGEEIS YNKLILNEKLGNIYSEIIKSPDLYKRVANELKKGGSNLDFKEIMAKSDFDVNPQAGLISL SFNDDNKDRAADALKSICENFRKMTKDYLNADNLEYLHEVLVDKASKKKLLIFSVAAGIA GAILGLAIVIIKTLLSDNIADEDDLRELDLDVLGSSDELLKVKAKIDHRLQNGVVGITSL GKVDSFDFAKNLAESLAPANGVLFVDSKNAGETDGKFLSDENSFKVLRKGDIDYLALAEK VSEKILDTNEFFAEIANRENAYNYILIDQKSLKTPDPYLGARLCDMEIILVDSKTKKSAL DKAISDFRELGIDYCGVVYHK >gi|229269862|gb|GG666049.1| GENE 109 89847 - 90851 783 334 aa, chain - ## HITS:1 COG:no KEGG:Apre_0164 NR:ns ## KEGG: Apre_0164 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 333 39 372 373 307 56.0 5e-82 MFIFAAMRGSGDADYYNYLWFAKDIGTDFDKVLNFSYPVEFSFRLASYLINLFGISRQWV IVLMNFLSIGPVTYVVIKKSANPFLSAIIFLPIFLQFDMQTSRTATAMGLGLLAIYLATE KKRFRSFLTLILAISFHKSAVILIPFLLYLEIDLNNFIKSLIVFLSLAVSVFSKLVFSIA ATVFSKIGLGILSRKIVTYTFEGKFAYGMQLFDPRIIFFFLLFIVSIMYLDEKTFGGDRM EKASVKAMVFGLCVMLVFRSSTAIAFRFSSFFAILEMFYLPMMIKKLKYEDSLAAFLLIL SIVVFIVPYAIYISVDAPEYDFFFTNTMAIESLN >gi|229269862|gb|GG666049.1| GENE 110 91246 - 91470 251 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485969|ref|ZP_03916285.1| ## NR: gi|227485969|ref|ZP_03916285.1| hypothetical protein HMPREF0072_1372 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1372 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 137 100.0 3e-31 MIRNQWGYTNTNTSKSSLPKKACDKQASLPALRQGAARGCSRKGAWGNPVRDPAEGPLGF PQIRSGHVNDLENL >gi|229269862|gb|GG666049.1| GENE 111 92120 - 92347 250 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485970|ref|ZP_03916286.1| ## NR: gi|227485970|ref|ZP_03916286.1| hypothetical protein HMPREF0072_1373 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1373 [Anaerococcus lactolyticus ATCC 51172] # 1 75 1 75 75 121 100.0 2e-26 MKEENQKQKSFKKRVIFYILQVILASIFIYQSLEKNVGGFVKEFNPLLFGIGILMIIMNV VFLYMEWKTHKRTSL >gi|229269862|gb|GG666049.1| GENE 112 92429 - 93481 1456 350 aa, chain - ## HITS:1 COG:BH3593 KEGG:ns NR:ns ## COG: BH3593 COG3595 # Protein_GI_number: 15616155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 3 324 2 313 364 62 26.0 1e-09 MTEEKQLILNMLKEGKITVEEASDLLAAIGDKKSKETDFAGKITSTVDSIIKKATEAISA IDLDQAFDINNFNLKGEINTHKDIRVDDEIDEINIDLINGEILLEKSTDKGIVISADIFA KKGNLEDYIDVEIRDNVLDIEENETYKNLGANVKLRVQVGKDFYEKLNVNTVNARVEIAD TDFGSLNIDSVNGKIMVINSKSAIDVNNVNGKIDIRNIEGPLNIDNVSGSIYLAGIKGDR VDVDNISGNIRVDGLASDKITADSRSGSIRIYNIKDTKDIDLETVSGIIVVDTTDYEGEI KAFVDSAAVNVTEKFQNKIKTDEGYDLSTSTDEAKLTIKAKTGNGKVSLR >gi|229269862|gb|GG666049.1| GENE 113 93474 - 93830 496 118 aa, chain - ## HITS:1 COG:CAC3001 KEGG:ns NR:ns ## COG: CAC3001 COG3877 # Protein_GI_number: 15896253 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 117 5 125 131 88 38.0 2e-18 MINKCPNCGDQMIITSYRCNSCYTEVHGEFEVDSFSRLDKEDKEFIELFLQKRGSIKDVG EEIGISYPTVRNRIDKIVSKLGGKIDKKSHRLDILNMLDNGEITTEKAKELLEELNND >gi|229269862|gb|GG666049.1| GENE 114 93975 - 94667 548 230 aa, chain - ## HITS:1 COG:no KEGG:Apre_0161 NR:ns ## KEGG: Apre_0161 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 230 1 230 230 161 42.0 2e-38 MRSIIKMVGILILFIFPPLFVNYFLISFDFYGESGMFISQIGIIGISLAAILLYLRGKRV YEAKTLMLIDGTKSVADLETLRDKRISYDSKAAVTKAILLRSFSEEEAAKLKRYTNKAAD MDHYYSGLIKNADSSLREEYKIRRDNFNKKYKHKSFVYIDFKENLRMSLKWLGGFFIILI GAGLVQKFTTIKDLYVLAYIFQMVFGLGFMINTVIWLSRTLRSYWDKDYI >gi|229269862|gb|GG666049.1| GENE 115 94651 - 95664 910 337 aa, chain - ## HITS:1 COG:SPy0515 KEGG:ns NR:ns ## COG: SPy0515 COG0438 # Protein_GI_number: 15674619 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 1 332 1 331 332 254 39.0 2e-67 MKVLIYSKDYETVKESGVGKAIDHQIKALKLVGCDFTLDEKDDFDLVHINTILPGSVHFA IKAKKMGKKVVYHGHSTMEDFKNSFIFSNQIAPLFKKWLVYAYRKGDLVLTPTEYSKKIL EGYHIGRPIEVVSNGIDLDFWQKKPNDRENFYKKYGLNPEKKSIISVGLPIKRKGIDDFL RLAKRMPQYEFLWFGKLDRALMSPGIKKEMEDVPANFHAPGYVSSEGVREAYAGSDLYAF LTHEETEGIVLLEALATKAKILIRDIEIFEEGFVDGENIYKGKSLDDFERKIKGILEGSL PDLSEIAYEKAKEKSIEKTGARLLDLYERTMKNEINN >gi|229269862|gb|GG666049.1| GENE 116 95633 - 96796 1046 387 aa, chain - ## HITS:1 COG:CAC2536 KEGG:ns NR:ns ## COG: CAC2536 COG0438 # Protein_GI_number: 15895799 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Clostridium acetobutylicum # 1 375 1 382 393 267 41.0 3e-71 MKILITSDWYWPVVNGVVRSVMNLIEYLEGEGHDVRVLTLSNTTKSYRDGKVYYVGSLSA EKIYPQARISNLLAKSHLKEIKAWGPDVVHSQCEFSTFMMAKRIASDQEIPLIHTYHTVY EDYTHYFIPSKQAGKKIVSVASKTLASLCNRIIVPTAKTENLLINYGIDPAKIDIIPTGI HIPELYDKTLLRKALGIEEDAKVLLYLGRLGEEKNIQEIMEYYDRLKDSEIKLYIVGGGP YLDTLKEDAAKITKEVIFTGMVEANSVNRYYQAADIFVTASTSETQGLTYYEALANGTIA LCRNDSVLDGVIKNGFNGFKYENFEEFEKFIDRVFSDSEYKELLEINTRAYARENFSVDG FGTKCLACYDKAIKEYKRESINIFKRL >gi|229269862|gb|GG666049.1| GENE 117 96966 - 97136 142 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSPYLGEPQGTFRRVPHWVPPGPLSATPPSGSLSGVRNQKFAFRQTSFLEGMTLY >gi|229269862|gb|GG666049.1| GENE 118 97879 - 98232 291 117 aa, chain + ## HITS:1 COG:no KEGG:Apre_0158 NR:ns ## KEGG: Apre_0158 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 115 1 115 116 107 54.0 2e-22 MGPVIVGDLMLLIFSIYIGIFFIFFHTNHPDMSVGFHVWEACYSKDTWRFANLFAGALAI GLGVLFYGIIVPILIYLELSREILSIIIIISLLIFFLLLFGLAKLVLRKKFNLKDNS >gi|229269862|gb|GG666049.1| GENE 119 98243 - 99508 803 421 aa, chain + ## HITS:1 COG:no KEGG:Amet_4219 NR:ns ## KEGG: Amet_4219 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: A.metalliredigens # Pathway: not_defined # 1 344 1 322 409 124 27.0 1e-26 MKFGEFAKINNITKDTLRYYMKIGLILPSKSGGNYIFTESDQKDIEFILDCKDFGFSVDD INKLISLKRNLHPLDHRFNNFMASELDNKKELIKNEIKNLQNKLDFLNNKSDEYLKNRQI YQKLGVAVDFLKNLSCPSCGSSFNFTNADIEDSYIIHADLHCKNCSYHLKIEDGIIIEDN LQDSPIKIEDLPIKENHEYWLDTHLAMEWKELKNLKPAEFQKVFKAYNWMYERIIDSKPV KNNEVSCIMTSETNSGRFLFYHLLNKIGDDNPIKKSTLIVAMGNIRAAKKLKNLLESLGV KLDIAIICASMDKLPISDGSVNIFLDDYSSFYYLLREKKVLLDDDNFNKYLSSDAEVLGI LPKDFFILHKHLDMSINNSPFLNKLYNNPKFIRTYDPDNNIKQDVCSLDFTAYHYDFEGR L >gi|229269862|gb|GG666049.1| GENE 120 99549 - 100391 1112 280 aa, chain - ## HITS:1 COG:BS_yxnA KEGG:ns NR:ns ## COG: BS_yxnA COG1028 # Protein_GI_number: 16081052 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Bacillus subtilis # 6 212 31 237 307 101 29.0 2e-21 MTDYKDKVVVITGAGTGIGYGMAKEFAKRGAKLAISDINDETLRKLEEELKNDGVDVIAY RFDVSNRGQMEKFARMTFDHFKRVDYCMHNAGVTSMGHALKIPETDYFRDFEVNTMGVVY AARSFIPKMEEQEGEAYFIPTISSSAFLYTGAIPAYIVSKHGAQGFCEALAIQLENDKSN VKVRVHSPGTVATEICHPKYYMLDRRDAYFQTEEFKNLEKAISHFIATGGLTVEEYIPEL FKQLDEDLFIIRPCVSEEPRCTYRSESLISREGPFKEGQR >gi|229269862|gb|GG666049.1| GENE 121 100420 - 102339 2143 639 aa, chain - ## HITS:1 COG:lin2337_1 KEGG:ns NR:ns ## COG: lin2337_1 COG1902 # Protein_GI_number: 16801400 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Listeria innocua # 5 359 3 361 361 228 35.0 2e-59 MSKLYPNFLSPAKIGKVELKNRCIMPPMGTHRVGSDLKVNQVIIDYHKRRAEGGCALNVV EVACVHPSGVTGADLGIFDDSFIPSLRELVDGIHQAGGKAAIQLWHGGRQIFTKGQPWSS TDIPCPKLQIPPHKMTTEEVYEMIEAFGDAAVRAEKAGFDVIGVHAAHGYLIDQFVNEYS NNRDDEFGGSFENRVRFGVEVIKNIKKKLKKDTPILVRMNAEEGVEEGGLKLDEGIKVAI AYEKAGADALDISQGCNSAMAISTPPYFLKTAFNEDNCREIKKHVSIPVICPGRIISPEI AEEVISSGAADFVDVGRAQLADPDFVKKAEEGRADEITLCVGCTQACFSRIMKGDVSCIF NPQTGHEIDRKIEATTNPKKILVIGGGPAGLEASRVAALRGHKVILFEKTRRLGGQYILA GAAPHKSILADAVSQMGVKAASAGVDIRLATEANPENIKEINPDEIIVCAGSSPFIPPVA GMDKLKTYVAHDILDFKDFVKEEKIAVIGGGLVGQEIAEVLAENGKDVFIVEMLDDVIGV IDILIRKHTVDTFNRLNIDLLTSTALKEIVEDGIIVSQKGEERKLDADAVVFAVGSRANK DVVDMVDKLNIPYHVAGDAVKASKILDAIWPANEIARTI >gi|229269862|gb|GG666049.1| GENE 122 102340 - 103572 829 410 aa, chain - ## HITS:1 COG:yhjX KEGG:ns NR:ns ## COG: yhjX COG0477 # Protein_GI_number: 16131418 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli K12 # 31 383 31 372 402 89 24.0 9e-18 MTKNRFYGWINVGLSALIMLLTLGLGNASLSQFLPLIAKDLSVNMSQVTLLVSFSSISIA IFGALIGHAIRKFGHKNLVYIGVFLYSLSILILSFSNSLPLIYLAGVAMGAGISYGTSLT LSTIISAWFIEKRGLALGLVFAASGVGGFIFNPIVARFILSIGYRKTLFIEAITIFIVCI VGAFFIVANPKDKGQKPLGEIGVINENECAEESLNKTDIYRSLPFILLVFSCISFAMAIQ PTMYNFFPHYLSLGYDQIFIANLISIVSLVNIAAKLIMGYVNDKFGLIKAISIGFIGYFV CDFIMIVSNSKTSAYLAVIAYGFALTMLVVALPLIVPKVFGMKHYASILGILTAFLTIGS SIGTPLSSLIFDKTGEFKISFIIQAILIVVSYLLFLRAVTYKSNLNKKGK >gi|229269862|gb|GG666049.1| GENE 123 104191 - 106863 3143 890 aa, chain + ## HITS:1 COG:SPy0623 KEGG:ns NR:ns ## COG: SPy0623 COG0474 # Protein_GI_number: 15674699 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pyogenes M1 GAS # 18 872 25 867 893 685 44.0 0 MDYKGSLNEVIKKHGADAKRGLTSSEAAARLEKYGPNAIESSNKKSLLSKIIEQLADPMV ILLIIAAIVSAFTGDVIECVIIIAIVVINAIMSIIQEGKAEDSVAALQKMSSPEATVIRD GQRGHVKAEELVPGDIVVIETGDIIPADMRLIESSNLKIDESSLTGESVAVDKDSNFETN EDVGIGDRENYVHSSSIVTYGHGLGLVAATGEETEIGKIAVSLDEVEDKETPLQKQLKKL SKLLAVLVVVVCMGVFALGYFRGSHNLLENFMVAVSLAVAAIPEGLTAVVTIVLSIGMNR MADRKAIVKNLLSVETLGSTTVICSDKTGTLTQNEMTITKIFTNDEEYEVEGTGYKPEGD IRRQNKEVINSDGQIELLMTIASLCNDANLIREGEEYKITGDPTEGAMLTFAEKWNINQE TLNDKHPRLQEIPFDSTRKMMTTFHELDGKYYAMTKGAPDVVMSHSSKILINGEMQDFTD EYRKKLADKNNDLASQALRVMAYAFRPLETLDQDLTTENIEKDMIFVGLTGMIDPARPEA KAAVAECHASGINVIMITGDYFETALAIAKDLGIATSRDQAMQGSELNDKTHEEIREIVK TKRIFARVSPENKVQLVKALEANDNVVAMTGDGVNDAPAIKNADIGVAMGITGTDVAKDA SDMILVDDNFATIVNAVEEGRVIFSNIKKFVSFLLSCNIAEVLIVFLSILMGLPSPLTPI QLLWLNLVTDAFPALALGVEPAEPGLMEEPPRDPKESIVSGDIRTNLISQSIFITLAVLG AYIIGLKWIFPGSIEGAHTMVFATLITSELLRAFSVRSTKYTLKELGFASNPHLIKAVIL SFALLLVVMYVPILTKLFEVVSLTWEWIPVLILASIPLVFGEISKTMRRK >gi|229269862|gb|GG666049.1| GENE 124 106978 - 107304 444 108 aa, chain - ## HITS:1 COG:SP1186 KEGG:ns NR:ns ## COG: SP1186 COG1447 # Protein_GI_number: 15901051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 9 108 3 102 105 84 47.0 6e-17 MTDTNNNPREELTNAGLKVVAFSGDARSNFLEALDLAKKGKFEEADQYVAMANENLELAS LAQKDFLENEAEGSRQGLDFLAIHAQDHYMTTLLLRDLIHNLIDIYKK >gi|229269862|gb|GG666049.1| GENE 125 107376 - 109472 1767 698 aa, chain + ## HITS:1 COG:SPy1325_1 KEGG:ns NR:ns ## COG: SPy1325_1 COG3711 # Protein_GI_number: 15675268 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Streptococcus pyogenes M1 GAS # 41 525 1 487 514 259 30.0 1e-68 MLFQAQNLKQKTPPTFTDAITEKIELFMIRFSGIMIVRRNMLSDREIRIIKFLYKNKDKY CTSTEIGYNVGFSEKTIRTNINLISENVPKNIFEIVAKKGSGFKLVIGDHDKYIDYIYKS KASMSNLDQIYDKKGREKYILENLLLENKALTFDDLLEILFVSESTLQRDIYSLRNKLKD YGLDIVKDDNSYLSISGKELEKRHFILDFFFSSIYSNSFINELEDLNLFHKATISQLLII LLDEIREYGISVNDYAIQNLVIHFALVIERVKINCLIDNYDKDIAKGEGDEFLDFAKSVI RRISKSFAIDLPIEEKKYIYLQLLSKTKLSSENSIKSFKDYNQVIDLLRYLSKKLNINLL DDNVFMNNFIEHLKALENRVASGLYISNPLTDKIKTQYTSYFDLVVDSFKKFSIFENMDI TDDERSYLVIYILSALERNKFNKKINVLVVCASGFSTGLMLKNRIQNEYTNTINIKNVIG YYEITPKNLDDVDLIISSVDLEGLVIAVPSVKVSVFLDEDDCALIDKEVEKLIKSYQDLR SDEQIVPNTNLTLFEKYFSEKNFLINKNPCTKDEVLNLIYKSLALTPEMEEIFRDQTLLR ENFGSIVFKTLVAIPHPISPIKDKAEIFTVISKADISWGKDSDKLKIVFYISPPGKNDPD FEKIIKVFTKILKDDSLIQALINIENFIDFKELILNLL >gi|229269862|gb|GG666049.1| GENE 126 109489 - 109821 377 110 aa, chain + ## HITS:1 COG:SP2024 KEGG:ns NR:ns ## COG: SP2024 COG1447 # Protein_GI_number: 15901845 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 5 100 10 105 108 62 38.0 2e-10 MGLGDLEETCMQLITFAGATKSAYVEAMSERRAGNEEKALELIKEGKETYAQCHKIHQQM FTTEHKMENSMQTLLLMHAEDQMMSCETIYVLANEIMQCYARIENLENKR >gi|229269862|gb|GG666049.1| GENE 127 109826 - 111154 1306 442 aa, chain + ## HITS:1 COG:BS_ywbA KEGG:ns NR:ns ## COG: BS_ywbA COG1455 # Protein_GI_number: 16080890 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Bacillus subtilis # 5 439 3 438 444 314 39.0 2e-85 MKKQTFMEKLEEKLMPLAAKISGNAHLQSIRDGFALAMPLLIIGSMFMLISNFPIQSWMD LLRSTEINGNTIASYFSAATNASFTIMSIFVVIGIGHAYGTRLKVDPLFSGVVSLVSWFI LMPFSFEFTPEGSEEALTINGLSFDWLGSKGVFIGIISAFLAVRIYKMIVDKGLVIKMPS GVPPTVGQSFAALLPAAFVMTSFVLIKFVFTLTPWENAFNFVYSVLQLPLQHIGGSLTAM VLVYLFAHALWFLGIHGTNITDSMFMPVLYALSAENLAKVSAGQLPENIINVQFQNLFAT YGGAGSTLSLLIVAVMISKSKRLKQLSRLSILPAVFGINEPVIYGLPIVLNPLLLVPFIL VPTVNIIISYITMNIGLVPIPNGIIMPWTTPPVVSGFLSSNWQGALLQVVLIIIGCIIYY PFVAAVDRNNLIQEESEESVEA >gi|229269862|gb|GG666049.1| GENE 128 111154 - 112239 968 361 aa, chain + ## HITS:1 COG:L176316 KEGG:ns NR:ns ## COG: L176316 COG3589 # Protein_GI_number: 15672155 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 1 361 1 360 364 245 38.0 1e-64 MRRLGISIYPEHSTFEKDLAYMKLASKYGFSRIFTCLLSVKESRDEIIKNFTNFIDKAHE LGFKVSVDTNADVFNLLGARADDISVFDKMGVDIIRLDWPLSDRENILITNNPYNITVEF NASSDMALDLLIKKGADRNKMTTCHNFYPQEYTGLSKERFDYFTQKYYDMALKVHAFISS NNDNTFGPWPVYKGLATLECHRYKNISYQLRYLIADRRINDIIIGNAYASCEELEELSKV DLSIPSLKIEAINDIIDIERKILYDFVHFDRIDSSDFFIRSSVSRAFAADKNIPPRKCDK EFFDEGDVVIINDNLAHYRGELEIVKKKIKNTGERNLVGHFDEDEQAIVNMLAEQNPFKI I >gi|229269862|gb|GG666049.1| GENE 129 112250 - 112573 596 107 aa, chain + ## HITS:1 COG:CAC0384 KEGG:ns NR:ns ## COG: CAC0384 COG1440 # Protein_GI_number: 15893675 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Clostridium acetobutylicum # 5 107 2 102 102 90 49.0 6e-19 MSDTINIVLCCSAGMSTSLVVEKMQEAAKNKGLDIDIKAVPVSSVEELDSSHKIDILLLG PQVKFKLNELKGVYKDQNTLVDVINMMDYGMINGEKILSDALKAYNK >gi|229269862|gb|GG666049.1| GENE 130 112665 - 113225 813 186 aa, chain - ## HITS:1 COG:FN0713 KEGG:ns NR:ns ## COG: FN0713 COG2059 # Protein_GI_number: 19704048 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 4 122 6 125 176 64 37.0 9e-11 MLRMMWEFFKAGLFAVGGGMATIPFLQAMGEKYGYFTSEELLDMIAVSESTPGAIGINMA TYAGIKAHGPLGGILATIALVTGPIIIILIIARMILAFKNSKIVKDAFSTLRPATAGLIL GAMSTVLVLTLVDTKAFAQTGNFMSLLRPIPLGLFAAFTLILFKFKNLSPLWIIVAGAGI GIVLGL >gi|229269862|gb|GG666049.1| GENE 131 113218 - 113754 558 178 aa, chain - ## HITS:1 COG:FN0712 KEGG:ns NR:ns ## COG: FN0712 COG2059 # Protein_GI_number: 19704047 # Func_class: P Inorganic ion transport and metabolism # Function: Chromate transport protein ChrA # Organism: Fusobacterium nucleatum # 2 172 4 174 186 107 36.0 1e-23 MNILLDLYISFVKIGFMTFGGGYAMLPILEREVVEKKKWATNEEILDYYAIGQSTPGIIA INTATFCGYKMAKNIGGVVASLGFITPSIIIITLIASFLKNFSHISAIQHAFGGIRIAVC ALVLYSVIKMLRKNANSVGKFMVFLLTFLAIAVFDISPVVLVIVVALIGIILGRFRHA >gi|229269862|gb|GG666049.1| GENE 132 114015 - 114857 1180 280 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485990|ref|ZP_03916306.1| ## NR: gi|227485990|ref|ZP_03916306.1| hypothetical protein HMPREF0072_1393 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1393 [Anaerococcus lactolyticus ATCC 51172] # 1 280 1 280 280 558 100.0 1e-157 MNNFKYILTGLFVASTLTLASPVLAAEDSTDETTIPEETKVIEYKDFDLDKMVGLKEDTD LVHEKTQLTQTSYKAENELEVKKEKGHPDRVEIKGSNRNATGTTSEPGSLSWRNYRRGDL SNFDIRTKNPDHITGAYIDKFLEKRGHYTPLKGYGDTILKYSNKYGINVGIFMGQIAKET NFGKHAGVGKYNFGCIRYYRNGVGGQWAPAYSRRGSAWVNPPTVEDGIEVVFKLMRDAYA NKGCTTYKAFINRYSPSFENNHRSFEQLAAGTMNALNISY >gi|229269862|gb|GG666049.1| GENE 133 114981 - 115640 697 219 aa, chain + ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 1 188 5 189 215 82 30.0 4e-16 MKKLIFDVDGTILDSMHIWVEPQSKLFAKYGFNLANLSKEEKAKIEALSVDDMCQYIADE IATDMTFDEVMQYFDDIVYTGYKDLLLPKPGNLEILKKLKDLGFSMSIASSTPYKYLEMA LKRLGIYDYFDFFATPELLHMKKSDPAYWQYSIMKHGARPEDCVLFDDALYALEAAKKEE IMTVGLKDFPWNKKEWAHIEEVADMTLEKISDMDVNKFI >gi|229269862|gb|GG666049.1| GENE 134 115810 - 117087 1702 425 aa, chain - ## HITS:1 COG:CAC0769 KEGG:ns NR:ns ## COG: CAC0769 COG3875 # Protein_GI_number: 15894056 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 421 6 425 426 466 56.0 1e-131 MKQVRLPYGKEFIEMEVGDDVAILESKAHSFKATKSQEDLVRDALAHPIGTEKLSDLVKG KKTITIISSDHTRPVPSAITMPILLEEIRSTNPDAEITILIATGFHRPTTHEELVAKYGQ EIVDNENIVVHKSGVDEDMVELDRLPSGGRLLLNKHAVNADLLIAEGFIEPHFFAGFSGG RKSVLPGIASEKTVLANHCSKFIASDYSRTGILVENPIHKDMEFAAEQAKLAFILNVVID ADKKIINAFAGHRVKAHYEGTEFVRGLSTVEGVNADIAVTSNGGYPLDQNVYQSVKSMTA AEAAVADDGVIIEVSRCNDGHGGESFYRTFKDAETPKDVEDRVLQIPMEETIPDQWEIQI LARILVRHKVIFVTDPENRQLIEDMHMTYAESLEDALRMAKEIKGEDAKVAFVPDGVSVI VNKKK >gi|229269862|gb|GG666049.1| GENE 135 117188 - 118531 1198 447 aa, chain - ## HITS:1 COG:TM0815 KEGG:ns NR:ns ## COG: TM0815 COG0534 # Protein_GI_number: 15643578 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Thermotoga maritima # 12 434 18 441 464 156 27.0 7e-38 MNRKIDLLHGNIRHTLLKLSFPLALTAFIQIAYGFVDTIWIARLGTKAMAGVGIAGFIFW IGNSLVLIPKVGMGVYASQAFGSRNEKETVMIINNGFIQAIVIGLFFTTFCLIVKNVFIE FYNLGHEAEMAAKDYFFVVSLGMIFFFVGPMFTQAFTSLGDSFTPFVINAVGLAINMVLD PVLIFGLGPFPHMGAKGAALATIISQFVVVLLYFLLVISKDGIIRSAITYIDYRENWQLE IFRLGLPAALLSGFHASISMVLNRFMSAFGPTPVAVCAIGSQLESISWNTTEGIQVGIQA LVAQNYGAENKKRVKESIKEAFRLVAIIGIIATLVLIIFRHKLFELFTPESKEAIELGAN YLFILGLSQAFMSIEIGLAGCFNGMSDTKTPAALGVINNLLRIPISLVLMPFVGVYGVWI AMSSTSIMKGLFAMGLIYRKVKRYMLA >gi|229269862|gb|GG666049.1| GENE 136 118617 - 119219 666 200 aa, chain + ## HITS:1 COG:all1011 KEGG:ns NR:ns ## COG: all1011 COG0110 # Protein_GI_number: 17228506 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Nostoc sp. PCC 7120 # 5 179 13 191 192 156 43.0 3e-38 MKNYENLKAGRLFKTDDYLVEKLTACWEKLVKLNTETNREERNKICQELFASFGKSTVLS PFRCDYGDNIYIGNNSFINFNVSMVDLGKIQIGNRVLIGPGTGLFTAIHPIDPEVRATGV EKGADIILEDDVWIGGNVTILPGVTIGKGSIIGAGSVVSKDIPQMSIAVGNPAKVVRKIN EDDKKYWQAEYDIYLHGMGE >gi|229269862|gb|GG666049.1| GENE 137 119381 - 121270 2105 629 aa, chain + ## HITS:1 COG:BS_licR_1 KEGG:ns NR:ns ## COG: BS_licR_1 COG3711 # Protein_GI_number: 16080911 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Bacillus subtilis # 1 481 1 494 499 209 27.0 1e-53 MIETRLKQIFDYLTLDYDYHTSKEIGEVMELSSKTIRKEINLLNSVIKDKGAIIESKPSK GFIFTIKDKDKFKIFLKNDWYKYAYYQEEDGDKNLRYVNILRTFLFSNSYIKQFELAETF HVSESQINKDLPNIRQILEGYDLELVSKPYYGMKVEGNEKDIRLAIKNEIGEDPLLFEGD KDRDLFDKIQEVIEKIDFGDDYYMPYVNFKNLVIHIYISVLRIKQGKYINLADEFKNKIK SYKEYQLAKNIVDKLELKLGIKIPNQELGYITMHLVAKNTIRDQKNISSEILKLSQAIID EIYKVSKYDFRANIDFFFALAIHLGPLVNRIRYGFNMKNPILDDIKENKISYLLATIGAS VVNEKYKTKLSEDEIGYIALHIMAAINSNTINTKNILIICGAGNSSAQIMKTQLNRQFGN NIKEIRTTDLRSLDQINMNDYDLIISSVKLGNDFDLPIVYVDIIFSKVDLDNIKIALDDT RLGKIYDIFANSVLVRTSKFTNKLEILKFIAETIEDKSNFEKETALNQLKKREEMGQTSF DTIAIPHILDQVKGDSYSIIIILDKPIKWNDNKVDLVYSLIVGDRLGDMSLYYEKLGEFL SNKPIQKEALKTKDPMEFMNVFMKGGING >gi|229269862|gb|GG666049.1| GENE 138 121263 - 121595 486 110 aa, chain + ## HITS:1 COG:SP0476 KEGG:ns NR:ns ## COG: SP0476 COG1447 # Protein_GI_number: 15900391 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 1 109 1 109 114 67 34.0 8e-12 MDSIEKVYELAFNIIAHAGESRSLSSEAMDAAESYDFDKAEELLKQANDQFLACHEVQTS MLTKEANGEKNEINIILIHAQDHLTMATMAMENAKRWIRINKKLKELEEK >gi|229269862|gb|GG666049.1| GENE 139 121595 - 121912 501 105 aa, chain + ## HITS:1 COG:SP0305 KEGG:ns NR:ns ## COG: SP0305 COG1440 # Protein_GI_number: 15900238 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Streptococcus pneumoniae TIGR4 # 1 104 1 104 104 101 47.0 4e-22 MKKVMLICNAGMSSSLMAKKVTEQLEKDGKDIIVDATTSSDSERVLSGSDYDMVLVSPQI RMYFDAYKEKADANGKAIAQVPFNAYAPTPSGIKNMENIILESLE >gi|229269862|gb|GG666049.1| GENE 140 121921 - 123276 1424 451 aa, chain + ## HITS:1 COG:L32812 KEGG:ns NR:ns ## COG: L32812 COG2723 # Protein_GI_number: 15672801 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Lactococcus lactis # 1 445 5 449 453 378 46.0 1e-104 MDKQLFWGNSTSSMQTEGAYDLDGKGKSVYDIREASENLSDWKVAIDEYHRYEEDIKLMK EMGANSYRFQISWSRVLPKGYGEVNEKGLEFYDKLIACLEKYQIEPIICLYHFDMPLYLS EKYNGFSSKKVIDYFFEFSKIIIDRYHERVKYWLTFNEHNLYSSDFALTIAGSNLEINPT NIHQVQYNTLVGHGRVARYVHEHYKDLKIGGMLAYTTYYPYSSKPEDNYIRNAYDNFDYN LYLNVFTQKGYMNTFKAYLEKNNIKIEKTDQEEEILNNIKSDFIAFSYYRSATLKYQGKD YCPLNTDVFVKNDYLDRNEWNWEIDPMGLEIAMLEIYNRTNLPIFIVENGIGLREELPEN EFIEDDLRIKYLKSHFDAMARAIDKGVECMGYLGWGFIDILSSSGSMDKRYGVVYVNRDN HDLKDLRRIKKKSFAYVKQVFESNGKERKIK >gi|229269862|gb|GG666049.1| GENE 141 123273 - 124583 1237 436 aa, chain + ## HITS:1 COG:SP2022 KEGG:ns NR:ns ## COG: SP2022 COG1455 # Protein_GI_number: 15901843 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Streptococcus pneumoniae TIGR4 # 9 433 6 430 431 398 51.0 1e-110 MTEKNKRSFVDKLSEASMKFGSQIHLKSLRDAFAIMLPLFIIAGIAVLINAVILPKILNE AQMAVASHWAISVANATLSISGLLICGIVAYTLSMNKGFEHAITAVMIAIASLIVMMPQT IDVTGANGEVVQAGGILSYGNLGTNSMFGGIIMGLLATELFIRLSNIKAIKINIGGNVPP AVNNSFNNLIPVILTLLIFSILSFVLFYFFQVDLITLIATMIQEPLRKVNTSLLGTILIY SLGNLIFTFGIHQAVIYSTILEPLLLVNINENMDAARAGLEIPHIMNLSLVQCYGLIGGS GSTICLLIAVFLFFRKNKQYRQIGELSFLPGLFNINEPIIFGLPIVFNLPMMIPFVVVPA MGILVSYLATLVGFMNKASVLVPWTTPPLLNAYLATGADFRAVLVQLVVIALGVLIYLPF LKISAKTLEKQAELEK >gi|229269862|gb|GG666049.1| GENE 142 124839 - 125984 587 381 aa, chain + ## HITS:1 COG:SP1600 KEGG:ns NR:ns ## COG: SP1600 COG0477 # Protein_GI_number: 15901440 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Streptococcus pneumoniae TIGR4 # 12 369 11 377 383 80 23.0 5e-15 MQKTTKKDWAALFIALFHTTPIAINQFAPNIIDGLGIPISITELILSLNAITGTIFLLLS GNINEKFGMRKTTIFGLSLVIISGLIPLCFRSELGIILNRLILGTGIGIYGANSSTYISI FNSGNKKAKLLGFRNAFEMIGLILAIFLAGSLGKNDFYNSFAVYVIALLPLIFFVATIPE VKFDSSESDEKFKANRFVKYYAAISFIVIMSTSAMNLRFPTVLAKNGIIGESISLYTMII MFVGMVGGFAFGKVYEIFKNHTLKVAILMVIIGSILISITDESVSLLVIGVGLATFFQSI VISYLVGDLENQMISKHIAKATGIIFASNNIGTLISPLVLLALKNITGFTNLTGVFIGIA AILTLFLLYEIFFLKSDINKI >gi|229269862|gb|GG666049.1| GENE 143 126120 - 127025 774 301 aa, chain + ## HITS:1 COG:SSO2521 KEGG:ns NR:ns ## COG: SSO2521 COG0657 # Protein_GI_number: 15899257 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Sulfolobus solfataricus # 59 295 66 300 311 68 29.0 1e-11 MNENKRDLYPDLGLEDIIEILRKKDESRLACANYSTGEVRVVSDLAYKDDGDFYHNFDIY YGNSTGKILPTVVNVHGGGLVYGTKEICKQACVCLAKLGFNVANVNYRLLPNVTFKDQIR DVVDGLTYLAENASKLGLYTEDFFLMSDSAGSFLTLAAYALMKDENFRKIFGIPAKNINI SAMGFISPMTGLMKTGSLALINEPTRRGLSDEEIPFTDDILRALKHTTLPKTIIATSEED FIRSQALALKKFLDAKNIKNKFLDFKKNDSYPLGHSFAFSHPNLDESEQVFEEMSRFFKN F >gi|229269862|gb|GG666049.1| GENE 144 127208 - 128098 1023 296 aa, chain - ## HITS:1 COG:CAC0674 KEGG:ns NR:ns ## COG: CAC0674 COG1760 # Protein_GI_number: 15893962 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 8 286 9 287 290 222 45.0 8e-58 MLTTMKLLKERCKEENLNLWQLAIKDEIENTGKSEEEIFQRLQKTLDVMKASSERALAED VRSVTGMTGGNARKMHDYYLKGEAVLGQVASTAMAMAFSTSEVNAAMGRIVAAPTAGSAG IIPATLMTMKHKYNCDDRSLCEALLISTQIGQVIFDNATFAGAEGGCQAETGSAAAMAAA AVCYLRGYDVEIQENAATAALLNIMGLICDPIGGMVEFPCNLRNANGIMNALASADMAMA GVEMFVTFDEAVEAMKRVGDSLPERLRETGEGGIAVCPSSLKLKRKYIDKLPEEEE >gi|229269862|gb|GG666049.1| GENE 145 128107 - 128766 846 219 aa, chain - ## HITS:1 COG:CAC0673 KEGG:ns NR:ns ## COG: CAC0673 COG1760 # Protein_GI_number: 15893961 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Clostridium acetobutylicum # 6 208 5 210 227 178 43.0 7e-45 MAVNSSIFDIMGPIMVGPSSSHTAGACKIGNIARRMVDRNFNEVDFYLHGSFAKTYKGHG TNRALVGGVLGFEPDDDRIINSFDYADKAGIKYEFFETDLGDVHPNTVKIVFKYADRTPL EVQGSSIGGGAIVITKVNGNAIEYYANKPTLFMAYGEQKGVIAHVSGVLFEYGYNIHMMK TIKDGDNVMLVCELDEPLKEGVLEKIREGKEFTFLKYIG >gi|229269862|gb|GG666049.1| GENE 146 128861 - 130072 1402 403 aa, chain - ## HITS:1 COG:FN2053 KEGG:ns NR:ns ## COG: FN2053 COG1301 # Protein_GI_number: 19705343 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Fusobacterium nucleatum # 2 391 4 391 395 357 53.0 3e-98 MKKIGLIPKMICGIILGILIGTYLPGSIVRIFVTFSSIFGNFLGFIIPLMILAFVTKGIA DLGEGAGKLLGITVAIAYCSTLVAGSASYFMARAIFPSFINDSQVAAIQAADKIELKPYF NVEIAPFFTVTSGIIFAFMLGICISWLRKKGSGAYLYGVVDEFNKIITQVLAVAIVPVLP FFIMGNFAKMAFTGSVFAVLSIFWKIFICIIALHLIYITIMFVISGAYSGKNPFAMIKNE LRGYFTAVGTQSSAATIPVNLQCAEANGVSQPIRDFVIPLGATVHMPGSMITITACVFTI LTMYNMNHSYGLMIQLIAILGIAMVAAPGAPGGAIMSALPFLPIVGISPESAMASLAISL YLTQDSFGTAANISGDTALAVAVDKFYHRNILGDKNWTADPVK >gi|229269862|gb|GG666049.1| GENE 147 130627 - 131760 1042 377 aa, chain - ## HITS:1 COG:no KEGG:Apre_0094 NR:ns ## KEGG: Apre_0094 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 375 1 377 382 416 55.0 1e-115 MKEYIQRGSWNDRAFDSINKLIANHGKDNPSYTPEKKPFAVFDWDNTSIIGDVEEATLYY LITNLAFKINPEELYEIIRVHVDRSDFRDPYRNLEGERVNIDKISADIYDVYKKLYGTSD RLGGDVPFEMIKETNAYKEFVAKMIFRYKAADHDKEAEDSYCWMAFLFTHYEPEEIEKFC EEAFAFMKNEEVRREKFISPNIETQAGRVAVSYFVGLGNIPEMVDLYHTLEQEGIDVYVV SASFIDIVRTFATGNSYNFPKEKVLGLRLTKDKRGKVIPELDKAYPMTQKEGKSETIRKL IQNEANYGPILVGGDSDGDLSMMTEFPTTDLGLIIDRRVKGEINNLKQEALAGSERYILQ ARNPYEKTFIRDETSIN >gi|229269862|gb|GG666049.1| GENE 148 131761 - 133125 1620 454 aa, chain - ## HITS:1 COG:Cj1364c KEGG:ns NR:ns ## COG: Cj1364c COG0114 # Protein_GI_number: 15792687 # Func_class: C Energy production and conversion # Function: Fumarase # Organism: Campylobacter jejuni # 1 454 1 459 463 491 54.0 1e-138 MDYRIEKDSMGEIRVGNDKLWGAQTQRSYENFPQGVARMPFDQIKSLILVKKAAALVNNS QGKLKDSYKDAIVAACDKVLNESFEDQFPLTVYQTGSGTQTNMNVNEVIAHLANETLGEN LIHPNDHVNMSQSTNDVFPTAMHITSLRLIKEELLPEVDGLAEEFYKRAEDFKGIIKTGR THLQDATPLSLSDEIKTYADLIKRDGAYIRESAKALEFLAIGGTAVGTGLNTKKGYDTKM AETLSDLTGLNLRADLNKFLQLSSKHGMAKAHGAIKILASDLLKIAEDIRFLSSGPRTGI GELIIPSNEPGSSIMPGKVNPTQVEMLTMICLEVMANDVAISLANSLGQLELNAYMPFIT YKMVDSVKILSKGLHSFNIHLVRGLVANEEKIKENLEKSLMLVTALSPHIGYDKASELAK YAHSKGISLREANAELGFVTDETFLKIVDPEKMV >gi|229269862|gb|GG666049.1| GENE 149 133125 - 134543 1854 472 aa, chain - ## HITS:1 COG:CAC0274 KEGG:ns NR:ns ## COG: CAC0274 COG1027 # Protein_GI_number: 15893566 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Clostridium acetobutylicum # 3 464 2 463 465 504 55.0 1e-142 MTEYRIERDSLGELKIPKDAYYGANAYRAYENFKITSKAMDPYFIRAIVEIKKACAIQNN KVGILSDRKSAAIVAACDEILAGKYLADFIVDPIQGGAGTSFNMNANEVIANIANVALGG SLGHYEHIHPNDHVNLGQSTNDVIPTAGKIAIIRYIEDLARDTEKLIKALDDKANAFDDY VKMGRTQLQDAVPITLGQEFKAYSRVVERGLMRFKKAIEELSSINLGGTAVGTGLNADDN FVENIDKILREITGLDLRQAEDLIDSTQNLDGFLFASSVLKTFAASLSKVANDLRLLSSG PTTGISDFKLPAKQAGSSIMPGKVNPVIPEVVNQVAFLVVGNDLTVTMAVEAGQLELNAF EPIIFYALIQSITTLRGAIQTLTVNCIEGITANKEKLRAKVENSVGIITAFAPHIGYDMA SSIAKQSMREARPIRELILERGLMTSEEVDKILDYRKMTQPGILDEEHMEKD >gi|229269862|gb|GG666049.1| GENE 150 134671 - 135801 1737 376 aa, chain - ## HITS:1 COG:no KEGG:Apre_0477 NR:ns ## KEGG: Apre_0477 # Name: not_defined # Def: sortase B cell surface sorting signal # Organism: A.prevotii # Pathway: not_defined # 1 376 1 409 409 238 45.0 5e-61 MKVKSKASLALALLLAINFMPGQINRSQADEAVAKEEAASDKMEVDDAIAIIEEAMADKE DVSKKDFEEKVAKAKADLKKYLDSMDEKSVDNPAIDYEGQTKAEIKKSIARAKELLADES IDQAKLEEMEKIPFKKIDGKKKGLFRDYTHKALVNFKVVGKRENTNPHNNKAYTGLKKNK IMIKSTFKGLKKAGESDSKFIKLNYVTEADYKAMKVDGVSSSTPKYNKQELPKEDYTVKE VAGGYEIEIKKLPADVKFIKPIVLVKLADGTYFENGDIVYAKSEKTPAKAEKVDQKSEAR EKASEKKEEKTSSKKAKEAKKTDSTSEAKKKDNKEEAKAGAKAPAKNAKTGVASSIAAIL TLGASSTALFASKKRK >gi|229269862|gb|GG666049.1| GENE 151 135977 - 137107 1487 376 aa, chain - ## HITS:1 COG:SP2056 KEGG:ns NR:ns ## COG: SP2056 COG1820 # Protein_GI_number: 15901876 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Streptococcus pneumoniae TIGR4 # 4 370 6 377 383 406 56.0 1e-113 MIYKADYFILEDSMLEDYFMEVEDGVIVGFSKNEPDEYEYLGEIVAPGLVDTHIHGYAGK DIMNAEEGALNVISKGLLECGVTSFLPTTLTDSKEKTDAALKQVALEYKDVEGAKVRGIF LEGPFFTEKYKGAQNPAYMSDPKVDYLKEWIEISDGLVNKIAIAPEREGASDFIKKANAM GVRVALGHSDASFEQAVAAVDAGANIFVHTYNGMSGLHHREPGMVGAAMSTDAISELICD GHHVNPNAANILMNAKGRDKIALITDCMSAGGMADGDYMLGEFPVRVEGGTARLKEGGSL AGSILKLKEAVKNVVDWEIADIFEAIQMASLIPAKSVGIDNVCGKLHEGYSADFIVLDYD KNLKKTFLNGKLVYSK >gi|229269862|gb|GG666049.1| GENE 152 137515 - 139452 782 645 aa, chain - ## HITS:1 COG:lin0425_1 KEGG:ns NR:ns ## COG: lin0425_1 COG3711 # Protein_GI_number: 16799502 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Listeria innocua # 3 473 7 488 519 79 23.0 2e-14 MKRRSEEILRLILQNTEDIKLSKIAKKFSLSEKTIKNDLDEINSYLSSIGQNYLFFDSDG SIYAYKKINKKIISDNLTTFNIKYYKFSQKERLDMIFILLLWNNDYYNSMKTFAEILNVS RVTIINDIEKLRKKINPSIKISTVPGKGVFIDVDRYTKTNELLEKFIDVSLMREKYIYND YLQSKLNIKSNFNEVLKYVNSYFSKNNIVVDENSLFILILYIFIVVNTKCYNGKTTEIIN EENQELLISYVSKELGVRINNDDAEDYRRFIKAKKIDSIKKEFDELNLYSVINHFLISID QKTGYDLSSDSVLIESLIMHITNMRDWGNLEIKLEDIEKSVVNFEYLHKIISEKICIIEN YLMYKLSSNMTKSIIIHICISLMRNNYQQYDIEVLIVCPGSVATGRLLEFQIQKYFNFKI KDVIPIEKIIIDTKILREVDFVISTVDLYSITSNFVKVSPILEMADLNNIQSIALKNQSY KHKLVQKYQYNNDRNSIYNPNVLSEILIKEVQIIENKLEWKRAIFEAAEPLLEKKYISKS YVLKSIENVEKYGDYIILGYGLAIAHAGKKKDVYKDSLSLLISRKGIEFFERNKKVYLLF FFATKGEEDYKKLYELLIRMGQDRKFIDTIAVKSSEEAYEMLINY >gi|229269862|gb|GG666049.1| GENE 153 139466 - 139762 376 98 aa, chain - ## HITS:1 COG:lin2815 KEGG:ns NR:ns ## COG: lin2815 COG3414 # Protein_GI_number: 16801876 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Listeria innocua # 4 94 3 93 93 59 35.0 2e-09 MSKKIKVLVACGSGIVTSTIVQEEIKRIAIENNIDIDIKKSTISEVESKQNEFDVIFTTS NYRNKLETPHLSVFGLVSGINKDKNIEDIIKILKQLSN >gi|229269862|gb|GG666049.1| GENE 154 139771 - 140307 471 178 aa, chain - ## HITS:1 COG:AF1796 KEGG:ns NR:ns ## COG: AF1796 COG0794 # Protein_GI_number: 11499385 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted sugar phosphate isomerase involved in capsule formation # Organism: Archaeoglobus fulgidus # 5 178 7 183 183 111 38.0 8e-25 MNDNIILEEIKKSFESIDEGKVSELIKIINKSNKIFVYGAGRTGLMLKAFAMRLMQLGYD SYVVGETITPAIEKGDLLLLASASGSTESVVSMARKCSENGIDIYIISSNTESALSVIRK PDILIRSSDKFNQNTNSKQPMSSLFEQMILLVLDYLVYEIFKREKSIGDLQSKHANLE >gi|229269862|gb|GG666049.1| GENE 155 140300 - 140887 503 195 aa, chain - ## HITS:1 COG:lin0505 KEGG:ns NR:ns ## COG: lin0505 COG0036 # Protein_GI_number: 16799580 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Listeria innocua # 1 189 23 211 216 184 48.0 7e-47 MEENGIKLIHLDIMDGHFVEKMAFGPDHIKAIKSMTDIPIDVHLMVDKPERIIGSVIEAG ADIITLHVESSVRLNSCLEKIKRSGSKAGLVLSPQTSEETLKYMLDNIDLVLIMTINPGE ANLGFNRNMIQKIKNTKKMIGDRDILIEVDGSIDDNNIKYCKKAGANIFVVGSYLFNGDF IYNLNNLKRKLEENE >gi|229269862|gb|GG666049.1| GENE 156 140958 - 141401 360 147 aa, chain - ## HITS:1 COG:STM3784 KEGG:ns NR:ns ## COG: STM3784 COG1762 # Protein_GI_number: 16767068 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Salmonella typhimurium LT2 # 14 146 18 151 157 85 31.0 3e-17 MEKISFLVFNGSALDNNEAIDKCVEKLVENGITDNLFSKLCIEREKEYPTGLPTEIPVAL PHAYYENINKNCICVMRLNSPVKFKRMDDNSESVDAKIVFNLAIKDSNKHIKTLQYLMGL FSDGDSLKKILAMNEDNLIKYLEEKVG >gi|229269862|gb|GG666049.1| GENE 157 141410 - 142669 730 419 aa, chain - ## HITS:1 COG:Z4877 KEGG:ns NR:ns ## COG: Z4877 COG3775 # Protein_GI_number: 15804015 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Escherichia coli O157:H7 EDL933 # 4 379 18 388 462 234 34.0 3e-61 MQILLNFFQEFMSLGATVLLPFIVAILGIIFKMDTKKAIKSGLLVGFGFQGLVLAVGLLI NSINPVMEYYKSIGSGYSVLEIGFAPLGAASWTVPFAVFVIPAIFFINIILVRFRITKVL NIDIWNFMHFLVPGALAYALFGSAFVGFVVSLICGIGVLFFAEWLAPAWQEFFGLEGTTC TTLSFAAWVYPITFILNKIMDKIPGIKNLDVNVSKLGDKLGIFGDTTIIGVLVGVFLSLI SKQSFSNTLTVAMGVGASMVLIPRMISVMMEGLTPLSNSASMYMRNKLGEGSELYIGMDI ALGLGDPACITVTAIMIPVTILLSFLIPGMRFFPLGILGEVCYLAPMCVLTSKGNLFRSL VTMTIMMAITLVFMNMFIGEATQMLSVTGVAVTGEVTASHFGWNPGNLIVNIIYHLFAK >gi|229269862|gb|GG666049.1| GENE 158 142682 - 143431 221 249 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 7 248 4 242 242 89 27 8e-17 MSRFEGKNVLITGSAHGIGKQIAIDFAKEGANIVILDFNYEEGVKTANEINEYGNAIFIK ADVSNYSDILNAKEIVEKKIGKINILVLCAGIAQKAKVNEITIEDWEKVININLTGLFTL SKAFYEDLINSKGSIVYISSGSALSGTGGGVSYPASKAGGEGLMRGLAKEMGPLGVNVNS ISPRLIDSGDMMRVNYPTQDSLDNVLKKIPVGRFGLCKDVSNLTLFLADKDNSYIHGQNI LLDGGRTIA >gi|229269862|gb|GG666049.1| GENE 159 143654 - 143776 57 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRGEILYAFLSLALGIILVVGIVRVKRLLKSINDKIDKL >gi|229269862|gb|GG666049.1| GENE 160 144051 - 145034 1514 327 aa, chain - ## HITS:1 COG:SA1994 KEGG:ns NR:ns ## COG: SA1994 COG3684 # Protein_GI_number: 15927772 # Func_class: G Carbohydrate transport and metabolism # Function: Tagatose-1,6-bisphosphate aldolase # Organism: Staphylococcus aureus N315 # 1 320 1 321 326 324 53.0 2e-88 MKISQEKLANLKKLVNEDGAIAALAIDQRGSMEKMMEKANSSLNNVEGIGSYKELVSKEL TPYASSILLDPIYGEKGIKAKDANAGLILSYEQTGYDEYDEGRLPRLIDFMSVLRAKEMG ANAIKTLLYYDCDDEEKTNNIKKAWVERVGYECEGLGLPHFLEIITYDRNMDSEKNAEYA KVRPHKVNSAMKEFSNPRYKVDVLKVETPTNMNFVEGLGKEEAVYSREEAIKHFKAQSES TNLPYIFLSGGITASLFQETLKLAKEAEANFNGVLCGRATWKDSVDIFGKDQKEAKEWLE TTGKENIQTLNEVLKQTAHSVFEKIEE >gi|229269862|gb|GG666049.1| GENE 161 145031 - 145960 1302 309 aa, chain - ## HITS:1 COG:SA1995 KEGG:ns NR:ns ## COG: SA1995 COG1105 # Protein_GI_number: 15927773 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) # Organism: Staphylococcus aureus N315 # 1 308 1 310 310 250 42.0 3e-66 MILTITANPSVDMSYQLDKLNIDGVTRTDKVIKHAGGKGIHVGYVLHDLGADVVHSGFVG GKLGEFIEEGLEQRGQKSKFIKIKEPTRNCLAILHEGKQTEILEAGPTISQAEREEFIRK LDDISAGCSVISMSGSLPKGLDSSFYEEIIAYAKNHGIFVAVDTSGQTLKDVVNAKIKPD LIKPNETEVADLLGEEISKDNIKDALTKAPLKDIKYVIVSLGSQGAVVKAGDRVFKASVP KVVAINPVGSGDSSLAGAIFAIDKDKSPEEVIKTSMTCGLLNVLTEEIAHIEIEKFDEYF EKIQVEEIK >gi|229269862|gb|GG666049.1| GENE 162 146018 - 146767 614 249 aa, chain - ## HITS:1 COG:CAC2950 KEGG:ns NR:ns ## COG: CAC2950 COG1349 # Protein_GI_number: 15896203 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 1 248 1 252 254 168 41.0 1e-41 MLKEERQKIILDKLKENNIIQVSQMTDLLDVTDMTIRRDLKELEDRNLLVRIHGGASKIE KARPREFSNEEKRLKNRELKLEIAKKIGELLLPEQNIYLGAGTTIEYVSEFLGDKNLNIF TNSLYLFRKLVFLDNVNIKLIGGEFRKVTGAFVGALSLDLVSKMRFNQAFIGVNGINKGK AYTYSPEEGILQKMILDNSFDRYLVADSSKLGYEDLYHFYNIEDARFITDSKISPEQSSE IEKYTEIIR >gi|229269862|gb|GG666049.1| GENE 163 146804 - 148207 1824 467 aa, chain - ## HITS:1 COG:SP1184 KEGG:ns NR:ns ## COG: SP1184 COG2723 # Protein_GI_number: 15901049 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 2 464 3 465 468 785 81.0 0 MRKLPEDFIFGGATAAYQCEGATKIDGKGEVAWDKYLEDNYWYTAEPASDFYHKYPVDLK LCEDFGINGIRISIAWSRIFPKGFGEVNKKGVDFYHRVFAECHKRGVEPFVTLHHFDTPE VLHSNGDFLNRENIEHFVAYAKFCFEEFKEVNFWTTFNEIGPIGDGQYLVGKFPPGIKYD LAKVFQSHHNMMLAHAKAVLAYKEKGYDGEIGIVHALPTKYPYDPTDERDVRACELEDII HNKFILDATYLGKYSEKTMEGVNHILEVNGGSLDIRDEDIKTLTKAKDLNDFLGINYYMS DWMAHFDGETEITHNGKGDKGGSSYQIKGVGKRRFDVDVPRTDWDWMIYPKGLYDQIMRV KRDYPNYKKIYITENGLGYKDKFEDNTVYDDARIDYIKKHFEAICDAIDDGAVVKGYFLW SLMDVFSWSNGYEKRYGLFYVDFDSQERFPKKSAYWYKDLAETKELK >gi|229269862|gb|GG666049.1| GENE 164 148383 - 149783 1614 466 aa, chain - ## HITS:1 COG:SA1991 KEGG:ns NR:ns ## COG: SA1991 COG2723 # Protein_GI_number: 15927769 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Staphylococcus aureus N315 # 5 465 7 469 470 515 56.0 1e-146 MKFKDDFIFGGATAAYQCEGATKEDGKGLVCWDVFYEENNLYNPDPASGFYHEYKQDIDN CVKFGINGIRVSIAWTRIFPEGSGKVNQKGVDHYHELFKYCLDNNVEPFVTLHHFDTPFE LNKNGDFTDEKVREDYLNYAKFCLDEFSEVKKWASFNEIWPWSVNQFITGTFPPGNKYRF DLAVENIHGMLTCHAKALNYFKDNNKEGEFGVIHSLETYYSIDENPENIEAAKRYDAIAN GLCIEAVLAGGYSKETLDRVNYILEVNGFDKFVPNQADLAEIKKASPRIDFLGINYYQAH WMKEYNGENLHIHNGTGDKGSFKSQLKGMGEEVKRDDIPKTDWDWSIYPQGLYDMIMRVS AYDNCKKIYITENGLGLKEELNSEKTVNDDARIDYVRDHLKAVLKANENGANVAGYFLWS LMDMFSWSNGYNKRYGFFFVDFDTLERYPKKSAYWWKELTESKELN >gi|229269862|gb|GG666049.1| GENE 165 149807 - 151498 2055 563 aa, chain - ## HITS:1 COG:SA1992 KEGG:ns NR:ns ## COG: SA1992 COG1455 # Protein_GI_number: 15927770 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Staphylococcus aureus N315 # 1 562 2 570 570 625 55.0 1e-179 MDSIIKGIEKITPFFERLSRNKYMVAIKDGFMETMPIVIFSSIFLLVAYIPNIFGFYWSK EMEAILTKPYALSMGLLGLVMSITTAKHFTSGLNREMPIDNQINATSVMFASLVSFMFLS VDQIEGGLSNGFLGSTGLIAAFISTFVVGNIYKVCIKNNLTIKMPKEVPPNISQAFKDII PFGICLVIFWLFDMLVRNLTGSNLAQAIIILIQPLFSAADSWLGLAIIYGAMAFFWFIGI HGPSIVNPAINAIAFINLANNTALFQAGQHATNIVTPNTGEFIATLGGTGATFVVPFMFM WLSKSKQNKAVGRAAVVPTSFGVNEPILFGGPLVLNPMFMIPFIFAPIVNVWIFKFFVEV LGMNSMIAQMPWTTPGPIGAFISTGFAPLSIVMMAIILVVDTIIYFPFFKAYDAQILKQE QEEEALLREAGVESEAELDAANRAEEERLIEEGKQADKETTVLVLCAGGGTSGLLANALN EGAAESGVKLRAAAGSYGSHHDILPKYDVVVLAPQVGSFYEDIKQDTDRIGNQLIKTAGK EYIALTRDPQGAVKFILEKTKNK >gi|229269862|gb|GG666049.1| GENE 166 151519 - 151845 498 108 aa, chain - ## HITS:1 COG:SP1186 KEGG:ns NR:ns ## COG: SP1186 COG1447 # Protein_GI_number: 15901051 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Streptococcus pneumoniae TIGR4 # 7 108 1 102 105 100 50.0 5e-22 MSSEKNLTRQDIGMIGFEIVAYAGDARSSLLEAIKCAKRGEFEKIDGLVRDAQENLNIAH AKQTEMLALDAQGKELEIGFIMIHAQDHLMTTMLLKDIVYDICEIYKK >gi|229269862|gb|GG666049.1| GENE 167 151861 - 152391 679 176 aa, chain - ## HITS:1 COG:SA1996 KEGG:ns NR:ns ## COG: SA1996 COG0698 # Protein_GI_number: 15927774 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Staphylococcus aureus N315 # 1 176 1 171 171 214 61.0 5e-56 MKIALGCDHIVTSLKMQVSDHLKSLGHEVYDVGCYDNTRTHYPIYGKKVGELVASGECDL GVVLCGTGVGITTSVNKAFGTRCALVRDVETARAAKRELNANVIGFGGMIVGKDLALEIV DGFLETEYEPSPDREKIIEKIMAIEESYKDDKAKQVNNPEFFTEFIEKWDRGEYHD >gi|229269862|gb|GG666049.1| GENE 168 152403 - 152855 615 150 aa, chain - ## HITS:1 COG:SPy1708 KEGG:ns NR:ns ## COG: SPy1708 COG0698 # Protein_GI_number: 15675561 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase RpiB # Organism: Streptococcus pyogenes M1 GAS # 1 149 1 140 141 130 46.0 9e-31 MKVFLASDMDGKGLKDALVEEVKRLGYDYEDLTQEGFDLVDSSNAVCKKLLEVDGMLTSG SDDQSVGVVIDKYGAGSYMACSKHKGMIAAEVSEERSALMTKRHNGARILVMGSAIVGEE LAKSCLRSFLSHGYDGGRHQIRIDMLNKML >gi|229269862|gb|GG666049.1| GENE 169 152865 - 154307 1522 480 aa, chain - ## HITS:1 COG:lin0344 KEGG:ns NR:ns ## COG: lin0344 COG2723 # Protein_GI_number: 16799421 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Listeria innocua # 5 467 7 467 471 441 48.0 1e-123 MKNHFPKDFLLGSAAAAYHNEGAFDQDGKGMMVADVLPHSPLDGRDDNPDTFNLKHLGVD FYNRYKEDIKLFAEMGLRAYRTSISWARIFPNGIEEEPNEKALAHYDDMLDELIKNGIEP IITITHTGETPLYLADEYGGFLNKKVIDFYIKYVKTIVKRYHTKVKYWLTFNEINISSNQ PFFHLGVSDELIKKDPQAKEQLIFNTFLASSRAIKAIKEIDENALVSQSTYIGPVYPYSM DPNDNLSAYFDNRRMLFYPEVHAKGEYPSWKLKDLKDRGIKLDASPDEWEIIKNNTVDFL AFSYYMSGLSKADVNDGEKSYSNEMTKLKNPYLSYTEWDWPVDPVGLRILANMLWDNYQK PLMVVENGFAKIESLTKGKDGELTVEDDYRIEALRDHLLELNKAMGDGVEFLAYTNWAVE DFVSGTTGTMKKRWGFIYVDRNDDGSGSLNRYKKKSFYWYKKVIETDMDFLFEKDYLEKI >gi|229269862|gb|GG666049.1| GENE 170 154415 - 155329 1203 304 aa, chain - ## HITS:1 COG:CAC0183 KEGG:ns NR:ns ## COG: CAC0183 COG2971 # Protein_GI_number: 15893476 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted N-acetylglucosamine kinase # Organism: Clostridium acetobutylicum # 7 297 5 302 306 107 29.0 2e-23 MSKDIYLGVDGGGTKTAFILEKDGEVFLHKEGTIHLSQISREEFKKRIGNAVENLTKQAG ISSDEIAYTFVSVPGYGQYPEDEAFIDESLREILGTDNFKVGNDCLNAWAGSLNAKPGIN LILGTGSIGFGLDDKGNSLRCGGWGPLISDESSGYYLGLRLINYFTKQSDGRIPKTMLYD LMKEELKITDDFEIIPMAEGMTRDELASVSKILGKLIENKDECALELIDKAGYEAALTIN TLAKNLNFEGKVLASYSGGVFNLGEALIGKIKQYLDSNIDLVKPYADPTQGALILAKKFF QENK >gi|229269862|gb|GG666049.1| GENE 171 155787 - 156869 1440 360 aa, chain + ## HITS:1 COG:VC1325 KEGG:ns NR:ns ## COG: VC1325 COG1879 # Protein_GI_number: 15641337 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Vibrio cholerae # 57 354 26 315 324 185 39.0 1e-46 MNIRKFASLALVMALSLGVTSCGSKKPAEEGKEEAKVEEKAEKGKEEAKSDGKAKKIAVL LYNGSDTYIASVRQQLEKLDEEDDSIELVYQDGQNNQGTQTDQLNNVIAQGVDGIFMNIV DISAAPTAMETIKASGIPTAFFNRDMTASMKEEDLKDFLFIGTDAPEAGKMQGQILTDLW KKGDMDRNKNGVLDYVMLNGGLDNPEAQARTEFSVKTLEENGIKVKEVAFQDCKWDTDKA KTAMDTWLQTNQDNIDAVIANNDGMAIGAISALQAVGMNTGSSKDNMVVVGVDATDLAVA EIDKGTMAGTVKQDAEGMAKALITTMKNRLGNGDFIEGTEYKLGADKKSIRIDYQIYTGK >gi|229269862|gb|GG666049.1| GENE 172 156931 - 158427 200 498 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 257 475 1 217 245 81 25 2e-14 MSNLLEMRKITKTFPGVKALDEVDFSLERGTVHALMGENGAGKSTLMKCLFGIYTPDSGE IYIDGKKVSYKDPKDALDSGVAMVHQELNQVSMRSVAENIMLGRFPNKYGIVDAKKMNQE TQDLFDKLGLNFDPKKIIGKYSVAERQLIEIAKAVSYDAKILVLDEPTSSLTESEVDKLF EIINKLRKQGVGIIYISHKMEEILSISDFVTVMRDGKFIDCKPASELSKDEIIKLMVGRK IDASNLKTDEYIKDEVMLEVKNLTGKYKPTVTDISFDLKKGEILGIAGLVGSRRTELVET IFGLRQKASGQIFIHGKEVENKDPIEAIKNGFALVTEERRATGIFPYAAIRLNATIANIK KYAKHSIVSDKALKEDTNRVIESMEVKTPSQSTKIMNLSGGNQQKVIIGRWLLTDPDVLL LDEPTRGIDVGAKYEIYKLIGQLAKEGKSVLFISSEMAELQMVCNRIMVMSNGRLAGIEK NDENLTQEKIMALQAKYV >gi|229269862|gb|GG666049.1| GENE 173 158437 - 159471 1373 344 aa, chain + ## HITS:1 COG:FN1167 KEGG:ns NR:ns ## COG: FN1167 COG4211 # Protein_GI_number: 19704502 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type glucose/galactose transport system, permease component # Organism: Fusobacterium nucleatum # 6 344 6 339 339 263 46.0 3e-70 MEKTENKKPFNFKEFMLNNALIIIIAALITGIIIVDPTFITNPKNILNILSQTSTRLFIA LGTGGLLILAGTDLSAGRIVGFTAAIAGALLQSPGFAQKFFPNIQNPSIIVGLLAAIAIG SICGAINGFGVAYLKLHAFISSLGVQLAIFGILQLFIAANPFGPQPIGGFDERYANLVRG GFHIPGTELQFPYLIIYAAIASVAMWFIWNKTVLGKNMFAVGGNPEAAEVSGINVTRTIM IVFIISGVMYGLSGFLEGPRLGSVTSTTGDAYDLDAIEACLIGGVSFSGGIGTIPGIVLG SIILQVINYGLLYIGLNSYVQIIIKGILIILTVALDTRKRIKKK >gi|229269862|gb|GG666049.1| GENE 174 159923 - 161032 600 369 aa, chain - ## HITS:1 COG:L79351 KEGG:ns NR:ns ## COG: L79351 COG3274 # Protein_GI_number: 15672661 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Lactococcus lactis # 12 368 2 331 343 130 29.0 3e-30 MKGNLETKTNSQRNIGLDMTRILAFLSVIGVHFFLNTDFYKIPVRGKRMLILATIRTGFM VCVPLFLLLTGYLVSGKNIPLEAKSLKKYYKKIIPILLSYALAMALIFAIFRLRGDGSYT FQKLVFGILGYKEYSWYVNLYIGLFLLSPFLINIWTSIGDKKTHLVILAVFCFLTVGPTV FNVNDLTSLKAIFSAYDDNRINHLLPGWWYNLYPLTYFFLGAYLRTYVDFKKVRPVKVFL CLILIIFASAAYNVWRSHGGVFQIRAWNSWGSLQNTASSICLFILINSIAPEGVNEKCGR FLAYISKLTFAAYIVSAASDRFVYGFVNTNLGGVKASMVYMPVIILSSATLALVMAAGVE FIKGKILSK >gi|229269862|gb|GG666049.1| GENE 175 161096 - 162457 1578 453 aa, chain - ## HITS:1 COG:L67186 KEGG:ns NR:ns ## COG: L67186 COG0372 # Protein_GI_number: 15672652 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Lactococcus lactis # 14 449 8 441 441 438 51.0 1e-122 MDKLLEEKLKFYAEEIEEATRIDKEIYEKYSIKRGLRNKNGTGVLVGVTKVGDVCGYEIK DGEKLLAEGELYYRGYPLTSLVHDIESTERLGFEEVIYLLLFDRLATKNKLERFKKILAE NRKLPPYFIEDTIMKVPGADIMNKMMRSMLALYTYDENPDGTDSLNVLSQALSLIAKMPL IAIYSYQVKIHNFDKKSLIIHNPDPEKSIAENILAMLRIDQKYTSEEAAILDLLLIIHAE HGGGNNSAFATHVVSSSGTDSYSAMAAGLASLKGPRHGGANIKVAKMIDNIKANVKDKED KQEIKEYLEKILDKKAFDGEGLIYGLGHAVYTLSDPRAVLLKEKARELAKIKGKEADFAF VENIEKIGQKLIQEKFNRAYPPCANVDLYSGLVYDMLGIPRELFLPIFAIARTVGWSAHR LEQIADKKIIRPAYKSLSEMKDYISLDERGGEV >gi|229269862|gb|GG666049.1| GENE 176 162459 - 163457 1285 332 aa, chain - ## HITS:1 COG:CAC0972 KEGG:ns NR:ns ## COG: CAC0972 COG0473 # Protein_GI_number: 15894259 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Clostridium acetobutylicum # 3 330 7 334 334 342 54.0 8e-94 MKITLIKGDGIGPEITAAMKKVVDALKIDLDFEEINAGLSVFEEEGVYIPQRLFDSINKN KIAIKGPITTPIGHGFRSINVELRKKFDLFANIRPIKAPGPLESKFEGVDMVIFRENTED LYAGVEEQISPDEAHSIKIITREKSERIIQKAFEFARENARKKVSIITKANIMKLSDGLF LEVGREVAKKFPDIDFEELLVDNTAMQMVMNPGRFDVLVTENLYGDILSDLGAGLVGGLG LMPGVNKGKDIAIYESIHGSAPDIAGENLANPIAMILTLCLLLDDINEKENAEKIRKAIY KTLVDKKNYTRDLGGENTTTGMADAIILNLGI >gi|229269862|gb|GG666049.1| GENE 177 163454 - 165391 2431 645 aa, chain - ## HITS:1 COG:CAC0971 KEGG:ns NR:ns ## COG: CAC0971 COG1048 # Protein_GI_number: 15894258 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Clostridium acetobutylicum # 1 638 1 638 642 736 57.0 0 MGTSLAMKILKKHLLRGELKTGEEVAIKIDQTLTQDSTGTMAYLQLEAMDIKDVATENSV AYIDHNILQAGFENADDHEFIKSAANKFGIRFSKAGGGICHQVNLEQFAKPGDTLLGSDS HTPTGGGMGELAIGAGGLEVAVAMAKGFYFVKVPKIYRVKLINSLNPAANAKDVILYILG KLTVKGGTGYIMEYTGEGVKSLSVTDRATICNMGAELGATTSIFPSDENTRAYLKSQGRE EDYLELSADPDAFYDESIEIDLAEIKPAVAKPHFPDQYSKVKDLGKIKLDQVAIGSCTNS SYMDLMKVAAILDGRKVHPDVSLVISPGSATILEKISENGALATMIKAGARVLESGCGPC IGMGQAPRSGGVSLRSFNRNFKGRSGTMDAQIYLASPETCAASAVLGYIADPSDLDYKAD FEKNVNFNHTDAYFIEPEKDLSKRIKETVKGKNIKPFPRAEKACDIDKKVVYKAGDGITT DDICPSNAHLLPFRSNIAYLSEFAFTTKIDDFKKRCEENAGGIIVAGENYGQGSSREHAA LLPLYLGIKAVVAKSFARIHRSNLINNSILPLVFEDESDYEKISEYDHIKISNMKKSIET GEFILEDLTKNIKIKLRGDFSDREKEILLEGGYLNYAKNLDLEAK >gi|229269862|gb|GG666049.1| GENE 178 165655 - 166809 1650 384 aa, chain + ## HITS:1 COG:lin1675_2 KEGG:ns NR:ns ## COG: lin1675_2 COG1454 # Protein_GI_number: 16800743 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Listeria innocua # 6 379 6 410 411 305 43.0 1e-82 MTYTTFSVPNTIVHGENALEYLSTLKGKKAVLVTGGSSMKRFGFLDEAKEQLEKAGMEVL IIDGVEPDPSVKTCLAGGAKMAEFEPEWIIAIGGGSAMDAAKAMWVFYEHPEWDFERLAN FDNPPLKNKARMICIPSTSGTASEITAFSVITDTEKEIKYPLVHPDFVPEVALLDMRIPA TMPPKITAATGMDVMTHAVEAFVSTASDDFTDPYAIRAIQLVFGYLKAAYDKGDDMVARE KMHIASCIAGMAFTNASLGIVHSMAHKIGGIFHLTHGEANAIMLPYIIDYNRKACDKYDE IERILGVDDIAEEIRKLNAAVGITATIKDGKNTIIEEKDFLEVLDKMSENAFKDACTLTN PRQTSPADIKKIYHAAYYGEKVDF >gi|229269862|gb|GG666049.1| GENE 179 167101 - 167826 464 241 aa, chain - ## HITS:1 COG:no KEGG:Apre_0068 NR:ns ## KEGG: Apre_0068 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 237 1 237 238 254 53.0 2e-66 MDINFKRQIMNDFSIGEEEFFSKNNIFTCNNPSCDFLFFNRADFSAICTSGKVFMRAANP DLIKKLREKFIAYQGAWFAEAANIRELEKILGEFEMGIDNFFPLMTLSDREVGMRDFDFK RIGRNEIQNFKDLARMSFCFDEDDRLGLAYYDGDSLIALAGASYSGKYLWDIGLEKFSSD DKYQGLAASLLRKLSLLIREENPDISPITTTQFSHTKSINTSIRAGYEMNLCITGSKKIQ G >gi|229269862|gb|GG666049.1| GENE 180 168104 - 170491 2414 795 aa, chain - ## HITS:1 COG:no KEGG:FMG_0026 NR:ns ## KEGG: FMG_0026 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 5 752 2 770 773 729 57.0 0 MKNNKNIGKAVLFACIFLTSLSSCSMFKNKKEEKNLQQNQVKTSQKVTYEAKKTSLKKDT TTEVLVDAEIKKEDIVKVVKHGDHWHVFTKDGREKITYSDPNQIKDTGHFEMVSVVGKNQ LKNKNVVAIKKHGDHYHVYLADGTEYLTYEDPSALFPNIKIGTYTGSHGQQNAGKSKAQK VAENKKVKEKLEKDDERVIKILKHGDHYHIYTSKGNEFVTYEDPRSLYPNASYGIYVGNH GDRKKMIAKILKEDKEMQAKKKAAGLEDEIENSDKLKEDDKLVKVEENKKTHNVVSILRH GDHWHVYTADGREYITYSDPSSSYPDVAVGTYHGSHGDKKENQGKGKPEDNNKDKKENQQ EEGSSEDKPTNPTEDRKTRIEKLKILSVLGQKGEVDRYDIVEILRHEDHYHIYDSKGREG VTYENPKDLYPKASYGQYQGSHSAEGKNKDKINWPEGITKIVDHRDHWHLYRGDDEVAVV YVNPRDRYPEAEYIKDYVDVGNVEVEDKDLFTYDSVDSEKVDGIESVLSDNLRSMTGYGK LNDGIPIMGTDDKEGEVFYWLHGNHYHALSIKDLVKMEKAGAFKGYTARQVVATLKYKIA YPKTDLSYKSDLNIDEIKAYLKSYYKISDDSRIFSLGGENIDIYTGEETNHFHISKFEKK NGKISYKENLPKILSDKELEKKEEEKEKEEKQDKEEKQDKENNNKTEEKPSKENSNEKND GKKDSENNEKNLEEDGQKEKEKEEQEKENQNNDLSGYASREEAEKAAKKALENNPAKDSY NFFQGANGRWYYTLK >gi|229269862|gb|GG666049.1| GENE 181 170503 - 171297 721 264 aa, chain - ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 255 1 255 268 150 38.0 4e-36 MLDIFEYEFMQRAFIVGGLLALILPCMGQLVLLKRLSMIGDTLSHSSLAGLTIGLAFGFS PILAAIIACLFAGLSIELIRNKLKSYQEVSTVIILAASIGLAGIFSSMVKNTNAISSYLF GSIVTISDEEFYLVIGVAALVLAVYSILYKKLYLTIFDQQAARIMGINTRMINLFITFLT AITVSISAKTIGSLIVSSILVIPSICAMQYTKTYKQTLLLSIGFSIIFVFLGLVISYYLD LKPGSVIVLISVLWLILSLVVKRK >gi|229269862|gb|GG666049.1| GENE 182 171304 - 171978 263 224 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 4 214 6 221 318 105 31 1e-21 MNLSMNKEVLKVAGLSFAYEKDLILDNINFEIQEGDLVALVGANGVGKSTLLKLILGDLK AKNGQIQILNDDIRKDNHYRDLAYISQNAVASYRNFPTSVEEAIKIHLSYLKKKSNPKEL MEKLGLYEHRKKALSELSGGQIQRFAISLALIKDASLILLDEPTTGIDEDFSRDFFENLK ELKKAGKTIVIITHQLDMAGDFVDYALRIRKGKIERISKDKLSL >gi|229269862|gb|GG666049.1| GENE 183 171959 - 172897 1013 312 aa, chain - ## HITS:1 COG:BS_ycdH KEGG:ns NR:ns ## COG: BS_ycdH COG0803 # Protein_GI_number: 16077354 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Bacillus subtilis # 8 310 8 315 319 171 35.0 2e-42 MKHFRNLFFIFLLAGLCLTSCGKEDKNIENKAVEDQKVAGKKTIYASFFPVAEFVKMIGG DKYEVKTIIKTSEEPHSFELTSQAMKDLEGTDLIAYNGAGMESFIDDLKDNVKDDDKFLD LSDGLTLLDSSKEGSDMASINPHTWLSIKNAKVMVDNIYRKLANMDPTNEKYYKDNLDKA LAKFDDLDKKFTDELAKVKDKEKYFVVSHAAFNYLADDYGLKQVAVTGISPEEEPSAKDL KTIADFVKEKNIKTIFFEGKATPKVAETLAKNTGTKTSTLYTMENLDDDMVAKGYIGLME ENLKALVESFNE >gi|229269862|gb|GG666049.1| GENE 184 173757 - 174653 770 298 aa, chain + ## HITS:1 COG:no KEGG:Teth514_1217 NR:ns ## KEGG: Teth514_1217 # Name: not_defined # Def: hypothetical protein # Organism: Thermoanaerobacter_X514 # Pathway: not_defined # 2 296 3 297 299 321 57.0 2e-86 MKNSKNFNLFFMDGEVTGRIKCTLSNWTGLAYKVPRTYLEKCKDRQDLKQSGVYFLFGKN DDGDDEVYIGQAGIRKNGEGVLFRVSEHLKDEIYFSDAVMLTTQNNSFGPTEISYLENKF TNMAIDVDRYKVRNGNDPNPGNVTEEKESELEDFVEYSKMVLGVLGYKIFVPIVDKDTKE KYENNNDKESILYLSRKSGKSNRQIEAKCKRTDEGFVVLKDSMIEIIDSIAIPKSIKELR EQCLDKNEIVDGKLNKNYLFNSPSYAAAFVLGTNANGRTSWKNEKGITLKDLEENEMK >gi|229269862|gb|GG666049.1| GENE 185 176275 - 176538 141 87 aa, chain + ## HITS:1 COG:no KEGG:CE1543 NR:ns ## KEGG: CE1543 # Name: not_defined # Def: hypothetical protein # Organism: C.efficiens # Pathway: not_defined # 2 81 100 179 261 72 53.0 5e-12 MAPLLPKLRGHFAEFLNKGSSARLGILYLPTCVGFGYGRFGLDSDFSWQFEISYFSTYVF DTYQALALIVCGFAYTLALTLRLASIS Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:56:04 2011 Seq name: gi|229269861|gb|GG666050.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD7, whole genome shotgun sequence Length of sequence - 15317 bp Number of predicted genes - 17, with homology - 17 Number of transcription units - 11, operones - 5 average op.length - 2.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 814 663 ## HMPREF0424_1167 hypothetical protein - Prom 906 - 965 2.7 2 2 Tu 1 . - CDS 1641 - 1835 349 ## SPCG_1017 hypothetical protein - Prom 1863 - 1922 6.8 - Term 1852 - 1899 5.2 3 3 Op 1 . - CDS 2016 - 2189 170 ## Apre_1789 hypothetical protein 4 3 Op 2 . - CDS 2263 - 3690 1240 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 5 4 Tu 1 . - CDS 4891 - 5181 434 ## Apre_1787 hypothetical protein - Prom 5295 - 5354 5.3 6 5 Op 1 . - CDS 5403 - 6053 279 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 7 5 Op 2 . - CDS 6056 - 6700 448 ## Blon_0996 hypothetical protein 8 6 Tu 1 . - CDS 7069 - 8256 343 ## Blon_0996 hypothetical protein - Prom 8399 - 8458 7.0 - Term 8389 - 8427 -0.3 9 7 Tu 1 . - CDS 8469 - 8786 342 ## Apre_1805 TraG family protein - Prom 8807 - 8866 4.9 10 8 Tu 1 . - CDS 8940 - 9185 242 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase - Prom 9332 - 9391 6.0 - Term 9355 - 9385 0.3 11 9 Op 1 . - CDS 9421 - 9678 100 ## FMG_0944 hypothetical protein 12 9 Op 2 36/0.000 - CDS 9701 - 12025 1466 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 12062 - 12121 10.4 13 10 Op 1 4/0.000 - CDS 12129 - 12809 328 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 14 10 Op 2 40/0.000 - CDS 12862 - 13722 528 ## COG0642 Signal transduction histidine kinase 15 10 Op 3 . - CDS 13724 - 14374 786 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 14498 - 14557 4.8 16 11 Op 1 . - CDS 14759 - 14929 181 ## SPH_1133 hypothetical protein 17 11 Op 2 . - CDS 14933 - 15151 294 ## COG3655 Predicted transcriptional regulator - Prom 15180 - 15239 9.8 Predicted protein(s) >gi|229269861|gb|GG666050.1| GENE 1 1 - 814 663 271 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_1167 NR:ns ## KEGG: HMPREF0424_1167 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 271 15 295 358 388 80.0 1e-106 MAEQNKEIVVIDETTIKSKIYYIRNQKVMLDFELAEIYGYETRAFNQQVKRNNEKFDDDF MFQLTDEEVYELSRSQNVTLKRGTGRGSNIKYNPYAFTEQGIYMLMTVLRGELAVKQSKA LIRMFKQMKDFIIENQDFISSKELVQIAIQTNQNTKDIAEIKSQMATKEDLKKVMDNFID PETYKHFLLMNGDKIEADVAYTKIYKSAKKSIYVIDNYIGLKTLELLRAARDKTQIIVFS DNVKNKDMLTKNILDDFRKDYPNIDLKLKIA >gi|229269861|gb|GG666050.1| GENE 2 1641 - 1835 349 64 aa, chain - ## HITS:1 COG:no KEGG:SPCG_1017 NR:ns ## KEGG: SPCG_1017 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 64 1 64 134 84 92.0 1e-15 MINEEISKEAGQAAQTIISYTIKAAKESINLDKEIRKKINDTLEKANGNLKSLMGDEMKL KDLY >gi|229269861|gb|GG666050.1| GENE 3 2016 - 2189 170 57 aa, chain - ## HITS:1 COG:no KEGG:Apre_1789 NR:ns ## KEGG: Apre_1789 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 57 1 57 57 72 91.0 8e-12 MNKRQELIDELIKADQDGTYKTYKSTEEIKAMNNAEVQILYSNMKNYLSDIRTHTNY >gi|229269861|gb|GG666050.1| GENE 4 2263 - 3690 1240 475 aa, chain - ## HITS:1 COG:mll5729 KEGG:ns NR:ns ## COG: mll5729 COG0507 # Protein_GI_number: 13474766 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Mesorhizobium loti # 1 193 69 239 1015 116 33.0 1e-25 MWNSVELFEKNSNAQLARNFIISLPKELSVEENKKMIEEYVQTNFVKEGMIVDLAIHDES REGNQNIHAHIMTIVRPINENGTWGQKSKKEYILDEKGEKILNKNGKPKTRKVELTSWND KGNVEKWRENFSDLCNEYLSKNKIEKRVDHRSFKRQGIKQIPTIHLGASASAMERKGIRT EKGDINREIKKQNELLRNIGNEIKKITSWLAGFKDKLKESYKEYKDQSKKQIENESGLFN LYEYLSFYQEMQENNRAELSFYGKRNKAIYDLKRYASGINYLRENKIKTISDLQGHINTL RSKNSEIYKTIKENSQKIEDLNKCLAYAKTVRKTKATYQEYENKKIFKESFYKNNQKEID QHIRARTLIEKISGKKNLREKEWLGEIKSLEDEISKLNTESEKIRERYKEINHIKYAVEV VNKEYGIDLSIEIDKAIKRGEKESIIEKIKEYKQDSDSFNKKRQSTKDYYKNQER >gi|229269861|gb|GG666050.1| GENE 5 4891 - 5181 434 96 aa, chain - ## HITS:1 COG:no KEGG:Apre_1787 NR:ns ## KEGG: Apre_1787 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 96 1 96 96 92 90.0 4e-18 MKKLDQIRQESKEIKDKINDTEERLRQLKNQEQKILKQDIIKRRKERTHRLITRGAILES LIENSEELTDEEIKILIEEATKTKEFKETLKIIREN >gi|229269861|gb|GG666050.1| GENE 6 5403 - 6053 279 216 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 200 1 199 245 112 35 2e-24 MSLITLKNIKKEYGKNQVLFENLSLEIEKGEFVGLVGKSGAGKTTLLNIIGLITDISEGT ITIDGHQNLSVNSKNAMILRRYTIGYLFQNYGLIEDESVLWNLKLALEYKKMKKKEKLKI INKYLKQFELSDMLNKKVYQLSGGEQQRIAIIKLILQGSQIILADEPTSGLDKENEMIVM ELLKELNEKGITIIMVTHNMNLCNYFSRVINVENFR >gi|229269861|gb|GG666050.1| GENE 7 6056 - 6700 448 214 aa, chain - ## HITS:1 COG:no KEGG:Blon_0996 NR:ns ## KEGG: Blon_0996 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 214 438 651 651 308 83.0 9e-83 MNYDQFYKIPGEEKSIDKFNVVYIDDDSTVKVNTENGFSDMTDPIIIVDTGDFGGLYYLD SLNRRCLFFQMESREEFSSLLAEYNFEKLVTAGTLLTPYLMQLENVKFVLKTLTMFTIVF MVSLLFILYISNYVDIVVNRKRYAAKEILGFSHFRTLKNRYIFWGIELIISGVLTVINYY FACLFAIILIDYIFCELLYRVYILNSLYEIEKGA >gi|229269861|gb|GG666050.1| GENE 8 7069 - 8256 343 395 aa, chain - ## HITS:1 COG:no KEGG:Blon_0996 NR:ns ## KEGG: Blon_0996 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 395 1 395 651 539 80.0 1e-152 MKKFLKIFIFLEIILFAYIFNTSIYNIYEKNNISSENLKGYVLEETSPEILDKFYTIFTE EYSQNKLELINNTLTSTDKSVYDLYCYPLNKFVQKQPISQSILLQYHELKKEDFLDSVGV FYTDLRADEIKEIASQLSVAISDFENEAIPYSMVLKLNLFNFIILYIVLQIIYCIYTSYS LKKIGIKKSMGFSTVHILKEQITSIIKYFVVICSVLICLLNLYYALTNRFEFSYLATSLL FFTIILAINIICVLITSILIKFVSLEAMIKNKTLNSGINIIVQAVKIVFSVIIAVTIISL LNQGNSFKQSQQDVLDYKYLDGYYTANGFNSSEYDYALANKDILESYSEQTLEMYNHNHS LLCDFSKGSALQTSRPYYEQQLVIANRNYLSELAS >gi|229269861|gb|GG666050.1| GENE 9 8469 - 8786 342 105 aa, chain - ## HITS:1 COG:no KEGG:Apre_1805 NR:ns ## KEGG: Apre_1805 # Name: not_defined # Def: TraG family protein # Organism: A.prevotii # Pathway: Bacterial secretion system [PATH:apr03070] # 51 105 544 598 598 101 94.0 1e-20 MIDKSNKKFWDKFAKLYAPFMKKDKEVYDKVCEYLSPHLNKDMEVLELACGVRPFLSDKF DITKYKNYKLLEDYDQKNLFDVEEYLANRDKVKLKSSYKINRLNI >gi|229269861|gb|GG666050.1| GENE 10 8940 - 9185 242 81 aa, chain - ## HITS:1 COG:SP1029 KEGG:ns NR:ns ## COG: SP1029 COG2265 # Protein_GI_number: 15900900 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 81 463 543 543 154 95.0 5e-38 MDELDLTSAESKATYAQIKEYVWNKFELKVSTLYIAQIKKKCGIELREHYNKSKKEKQII PKCTPEKEEAIMDALRHFKMI >gi|229269861|gb|GG666050.1| GENE 11 9421 - 9678 100 85 aa, chain - ## HITS:1 COG:no KEGG:FMG_0944 NR:ns ## KEGG: FMG_0944 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 18 85 1 68 71 74 82.0 1e-12 MKYKLSKKIFLLGLVIFVISYLLPVDIFEGFTSLRPTGLTSMFVCPIVGLIGLIFGAKEK SRLFILLNILLILLNPISMFVGHLI >gi|229269861|gb|GG666050.1| GENE 12 9701 - 12025 1466 774 aa, chain - ## HITS:1 COG:CAC2731 KEGG:ns NR:ns ## COG: CAC2731 COG0577 # Protein_GI_number: 15895988 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 3 724 55 824 875 112 22.0 4e-24 MASSFYHGEIKEELSNEDVEKLKSIKDIDLAGKMSLDPDNGKLGDDLVVINYQDKAINKM REYSRLIEGRFATKEDEIVLSESLVKENELKIGDKIELDLGKRFLDGEEIGPTSANTGRE KFESQDSKSFTLVGVYGDVYNKYSKLNFALGLQDKMTTFRTFVKFHSFEEAYKNRDKIQS EINKILGKDVHLEFSKSLINYYGVEHEPLQNIKSKAVTVLSVLGCIAIFVFFIKNIFWVW GLRKIRELSIYKSIGSSNGQIYLLLLKEGLVTTAIPILLGHIVGFLSIYYLYKYIQIDKQ LSEFNLVKFNPLLSLAILLVSFTIVALAIKSPAKKISKINIIDGIRGNIDFSKSKKKRAK DFWKELKLNNLASIKSQRYISAIGIIIISVFIITIGISTYYRDYSSYDNGYNFSVDYFSE KNQVPKILNEIVDKIPNDKSYISKDKYVQVENTNEFSKEAKAAGLDAEARKNIEKYKAKG MDGFIIALEEKDLKELGGKKGEFVLYNTIQEDSSIPIAKAKRIPYFENPQTLDINFENDY NKTIKISKTITDLGKYKSRTMPFDVKVYTDFDTYFKLMEESGDEKYTGYAYTLNMKVKDS DTKDVKEYVEAMIREQISPEDRFNITIGEEIAKNEYKDVKSFIKFAIGIASIIFVLNITN GYSSINLSLMSRKKEIGSLYSCGMDVDELKNIYQKEFIGEQVKSFIISIMVSLGVMFIMS IIASDLRMNTLIKYYDYKSFLGFSLVVYGINLIIYHFSLKRILDRPTIDLIRTI >gi|229269861|gb|GG666050.1| GENE 13 12129 - 12809 328 226 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 2 200 3 199 223 130 38 4e-30 MEILKVENLRKEYGEGNSKVIALDGVNLEIERGEFVAIVGPSGSGKSTLLHIIGGVDNPD DGKVYIDGNDISKYSSKELAYFRRRKVGLIYQFYNLIQNLTVRHNIELPLKLDKRKINQD EFSDIVKKLGIESKLDSFPSELSGGQQQRVAIARSLIYSPSIILADEPTGNLDRKNSKEI IEIFKYFNKTLKQTIILITHDEDIALQANRIVTIVDGKIVGDEKHE >gi|229269861|gb|GG666050.1| GENE 14 12862 - 13722 528 286 aa, chain - ## HITS:1 COG:CAC0525 KEGG:ns NR:ns ## COG: CAC0525 COG0642 # Protein_GI_number: 15893815 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 12 282 46 327 329 129 34.0 9e-30 MIYVFWIISLLLLYYFLESRKKNRINELINLIENMKNQEYKIPMKQDDFSILEDKIYKLF IEIVEAKETSRKNSEKQIEYLEDIAHQIKTPITSMLFSIENLEIDFPDNDDIEVLKRQTL RLNSLSDILLKLSSLDANKDLMKKEQIRLDELVDYALDSLNLKRSINVEKRTDLKENRII GDFYWLAEALINIIKNADNRPTCEKIVVSSYKNPLYTSLIIEDNGGGIEKENMKKIFKRF YKTPDSNGFGIGLAMAKTIIEKNNGEISVSNAKNGARFEIKFYNVT >gi|229269861|gb|GG666050.1| GENE 15 13724 - 14374 786 216 aa, chain - ## HITS:1 COG:CAC0524 KEGG:ns NR:ns ## COG: CAC0524 COG0745 # Protein_GI_number: 15893814 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Clostridium acetobutylicum # 1 215 1 221 228 143 39.0 2e-34 MKSVLIIEDNKEIASQMEKYLVNNGYEVELASSFYEATYMMNVNMDVALLDINLPDKDGQ HLIKKLKDKDIRVIITTVKNDEDFIIAALDQGADDYLTKPFSLAILRARIDAVLRTIPLT QDKKITYKDIKIDLNDSKVYFKGKQIELTPLEYEILVLFIKNPHRVYTRGQLLEMFWEDR DKFVNDNTLTSTIKRIREKLDKEVISTVRGIGYRMD >gi|229269861|gb|GG666050.1| GENE 16 14759 - 14929 181 56 aa, chain - ## HITS:1 COG:no KEGG:SPH_1133 NR:ns ## KEGG: SPH_1133 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 1 55 1 55 89 107 94.0 1e-22 MSLRTEDQVRDYAREVLGFNEIEENINQGTGQITTFNQLGFKGYSDKPDGWFLPKI >gi|229269861|gb|GG666050.1| GENE 17 14933 - 15151 294 72 aa, chain - ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 72 1 72 72 139 100.0 2e-33 MALNYKPLWIQLAKKGLKKTDVIAMAGLTTNVMAQMGKDKPITFKNLERICKALSCTPND IISFEDNFSDEE Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:56:31 2011 Seq name: gi|229269860|gb|GG666051.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD8, whole genome shotgun sequence Length of sequence - 6687 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 27 - 1385 770 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs - Prom 1439 - 1498 80.4 2 2 Op 1 . - CDS 2108 - 2851 889 ## HMPREF0837_11437 phage-associated protein - Term 2862 - 2899 -1.0 3 2 Op 2 . - CDS 2914 - 3945 682 ## PROTEIN SUPPORTED gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 - Prom 4091 - 4150 80.4 4 3 Op 1 . - CDS 4974 - 5147 139 ## HMPREF0837_11441 hypothetical protein 5 3 Op 2 . - CDS 5221 - 6630 1323 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member Predicted protein(s) >gi|229269860|gb|GG666051.1| GENE 1 27 - 1385 770 452 aa, chain - ## HITS:1 COG:CAC1228 KEGG:ns NR:ns ## COG: CAC1228 COG1961 # Protein_GI_number: 15894511 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Clostridium acetobutylicum # 16 421 110 510 544 143 29.0 9e-34 MQTGYYTENFFPKNNVRYIALNDGVDTFQENNEIVPFKNVLNEFYSRDVSKKMKSAYMTR ARQGKFIGCLAPIGYRKDNDDPHKLVIDDETSWIVEKIFDLAFSGYGVQAIRRRLFEEKI PTPTWWNRKKGLRNKKTKLEMTVDGGEYWWDCTTLKEIIENPVYIGHIASQKVNYKFKVG WLSDKPKEEWIIVENTHEPIISEDIYNIANEKLKSRRRPFKNGEESIFAGIVKCPDCGKS LNLGRNKSKKREKLLTCNTYRRYGKSLCSQHRIYYDTLYEIVLKDIRKNAEIALKDEKEI IKALEKSREIDNEEEQKFIMDKIYEDQIRVEDLTKKIERLYDDWLDNKISESNFQKILEK SQKEQDYLNQRIEDNQKLIVKEDLEDINVKKWIELIKKHKDIKKLDKETLNELISKIYVH EKEVVNGEITQTIDIYYNFIGNTDTLQVFYNL >gi|229269860|gb|GG666051.1| GENE 2 2108 - 2851 889 247 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_11437 NR:ns ## KEGG: HMPREF0837_11437 # Name: not_defined # Def: phage-associated protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 247 1 240 240 322 84.0 7e-87 MATNKRYYWIKLKEEFFTDKRIKRLRRISGGDTYTIIYLKLLLLSLKDEGKLYYDGVESD FIKELALTIDEIDDDVMVTVNYLINQGLLEVVTENDEYYLTEIPSLIGSETASTRRSRKS RELKMLQCNTNATHKQQKCNGEIEIEKDIEIDKEREGEIEKDKKSTPIFYGEFKNVRLSK EEYKNLKEKLNSHTEIMINKLSRYMESSGKTYQNHYATILNWYDKDKDKLRKKGLNKKMN YDVGESL >gi|229269860|gb|GG666051.1| GENE 3 2914 - 3945 682 343 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855185|ref|ZP_02477956.1| 50S ribosomal protein L31 [Haemophilus parasuis 29755] # 7 334 1 328 339 267 41 2e-71 MNKKNNIDRVHDDVFNSIKTLMDKARNEVAREVNNILVQTYWEIGRIIVEDEQGHSERAE YGKELLKDLSKRLTKEYGRGFSVSNLQFMRRFFQEYEIQQTVSVKLTWSHYCELLSISDE KKRSFYEKESINANWSVRELKRQIKTSLFERLLLSSGEENKEKVLDLALKGNEINKAADL VKDPYVFEFLGLPEEKPMMESDLEKALIDHIEKFLLELGKGFMYVGSQQRVTLGNTHYYV DMVFYNKILRSYVLIELKTSKLMPEAVGQINMYLNYYKAEVNDEMDNEPIGIILCTDKDG VQAEYALGNLSNKIFASKYTLYIPDREELEEQVEKVIKKYKEK >gi|229269860|gb|GG666051.1| GENE 4 4974 - 5147 139 57 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0837_11441 NR:ns ## KEGG: HMPREF0837_11441 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 57 1 57 57 73 96.0 3e-12 MNKRQELIDELIKANEDGTYKTYKSTEEIKAMNNEEVQILYSNMKNYLSDKRTHINY >gi|229269860|gb|GG666051.1| GENE 5 5221 - 6630 1323 469 aa, chain - ## HITS:1 COG:SMb21087 KEGG:ns NR:ns ## COG: SMb21087 COG0507 # Protein_GI_number: 16264414 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Sinorhizobium meliloti # 3 196 88 284 1539 117 35.0 4e-26 MAEKNSNAQLARQFIIGLPKELSLSENKNLVERYIKENLTSQGMIVDYAIHDESQDKNGN IHCHIMTIMRPINEKGEFLAKSKKEYILDEKGEKILNKNGKPKTRKVELTTWNDKGNVEK WRENFSDLCNEYLSKNKIEKRVDHRSFKRQGIKQIPTIHLGASASAMERKGIRTEKGDIN REIKKQNELLRNIGNEIKKITSWLKGFKDKLKESYKEYKDQSKKQIENESGLFNLYEYLS FYQEMQENNIAELSFYGKRNKAIYDLKRYASGINYLRENKIKTISDLQGHINTLRSKNSE IYKTIKENSQKIEDLNKCLAYAKTVRKTKATYQEYESKKILKESFYKNNQKEIDQHIRAR TLIEKISGKKNLREKEWLGEIKNLEDEISKLNTESEKIRERYKEINHIKYAVEVVNEEYG IDLSIEIDKAIKRGEKGSIVEKIKEYKQDSDSFNKKRQMAKDYYKNQER Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:56:46 2011 Seq name: gi|229269859|gb|GG666052.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD9, whole genome shotgun sequence Length of sequence - 28824 bp Number of predicted genes - 31, with homology - 30 Number of transcription units - 15, operones - 9 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 117 - 176 93.0 # AP008971 [D:616618..616735] # 5S ribosomal RNA # Finegoldia magna ATCC 29328 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis; Finegoldia. + TRNA 453 - 527 80.7 # Asn GTT 0 0 + TRNA 542 - 618 86.4 # Met CAT 0 0 + TRNA 637 - 713 82.6 # Met CAT 0 0 + TRNA 756 - 830 77.6 # Glu CTC 0 0 + TRNA 1052 - 1126 78.0 # Glu TTC 0 0 + TRNA 1165 - 1240 92.3 # Val TAC 0 0 + TRNA 1286 - 1362 85.4 # Asp GTC 0 0 + TRNA 1594 - 1669 90.4 # Thr TGT 0 0 + TRNA 1712 - 1786 92.3 # Gly GCC 0 0 + TRNA 1886 - 1962 74.4 # Arg ACG 0 0 + Prom 2092 - 2151 7.8 1 1 Op 1 . + CDS 2172 - 3242 1090 ## COG0225 Peptide methionine sulfoxide reductase + Term 3312 - 3358 -0.1 + Prom 3258 - 3317 6.3 2 1 Op 2 . + CDS 3371 - 4117 893 ## gi|227486500|ref|ZP_03916816.1| hypothetical protein HMPREF0072_1903 + Term 4123 - 4178 10.2 + Prom 4125 - 4184 5.2 3 2 Tu 1 . + CDS 4249 - 5475 1466 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 5483 - 5516 2.2 + Prom 5549 - 5608 7.0 4 3 Op 1 . + CDS 5637 - 5960 404 ## Apre_1305 putative helix-turn-helix protein YlxM/p13 family protein 5 3 Op 2 23/0.000 + CDS 5969 - 7309 1678 ## COG0541 Signal recognition particle GTPase 6 3 Op 3 . + CDS 7327 - 7572 415 ## PROTEIN SUPPORTED gi|227486504|ref|ZP_03916820.1| ribosomal protein S16 7 3 Op 4 . + CDS 7575 - 7799 308 ## Apre_1302 RNA-binding protein 8 3 Op 5 30/0.000 + CDS 7796 - 8281 712 ## COG0806 RimM protein, required for 16S rRNA processing 9 3 Op 6 33/0.000 + CDS 8274 - 8996 789 ## COG0336 tRNA-(guanine-N1)-methyltransferase 10 3 Op 7 . + CDS 8968 - 9315 584 ## PROTEIN SUPPORTED gi|227486508|ref|ZP_03916824.1| ribosomal protein L19 + Term 9325 - 9363 2.0 + Prom 9382 - 9441 9.2 11 4 Tu 1 . + CDS 9474 - 10349 798 ## Apre_1298 transcriptional regulator, XRE family + Term 10354 - 10389 1.1 + Prom 10404 - 10463 4.7 12 5 Op 1 . + CDS 10601 - 11737 571 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 13 5 Op 2 . + CDS 11781 - 12071 140 ## gi|227486511|ref|ZP_03916827.1| membrane protein + Term 12105 - 12142 1.0 + Prom 12073 - 12132 4.8 14 6 Op 1 . + CDS 12158 - 13135 875 ## Amet_3992 replication initiator A domain-containing protein 15 6 Op 2 . + CDS 13150 - 14007 629 ## COG1484 DNA replication protein 16 6 Op 3 . + CDS 14022 - 14513 458 ## SPAP_0867 hypothetical protein + Prom 14870 - 14929 7.6 17 7 Tu 1 . + CDS 14964 - 15968 669 ## COG3505 Type IV secretory pathway, VirD4 components 18 8 Tu 1 . + CDS 16921 - 17268 169 ## COG4823 Abortive infection bacteriophage resistance protein + Term 17288 - 17321 2.3 + Prom 17292 - 17351 5.3 19 9 Op 1 . + CDS 17458 - 17781 385 ## HMPREF9243_0143 hypothetical protein 20 9 Op 2 . + CDS 17782 - 17895 67 ## gi|320535241|ref|ZP_08035366.1| hypothetical protein HMPREF9554_00080 + Prom 17897 - 17956 59.8 21 10 Op 1 . + CDS 18196 - 18435 114 ## + Prom 18725 - 18784 6.4 22 10 Op 2 . + CDS 18818 - 20554 1134 ## COG3344 Retron-type reverse transcriptase + Prom 20778 - 20837 8.6 23 11 Op 1 . + CDS 20866 - 21084 316 ## COG3655 Predicted transcriptional regulator 24 11 Op 2 . + CDS 21122 - 21286 145 ## SPH_1133 hypothetical protein + Term 21315 - 21360 0.1 + Prom 21324 - 21383 7.7 25 12 Tu 1 . + CDS 21488 - 21778 142 ## COG1321 Mn-dependent transcriptional regulator + Term 21783 - 21831 7.1 + Prom 21839 - 21898 6.2 26 13 Op 1 35/0.000 + CDS 22084 - 23823 228 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 27 13 Op 2 . + CDS 23823 - 25544 216 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 28 13 Op 3 . + CDS 25568 - 26155 366 ## HMPREF0837_11107 major facilitator superfamily permease + Term 26238 - 26279 -0.9 + Prom 26292 - 26351 8.3 29 14 Op 1 . + CDS 26532 - 26828 79 ## BLD_0420 cobalt ABC transporter permease 30 14 Op 2 . + CDS 26833 - 28236 223 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 28445 - 28486 3.3 + Prom 28412 - 28471 9.6 31 15 Tu 1 . + CDS 28499 - 28813 394 ## HMPREF0837_11443 hypothetical protein Predicted protein(s) >gi|229269859|gb|GG666052.1| GENE 1 2172 - 3242 1090 356 aa, chain + ## HITS:1 COG:HI1455_1 KEGG:ns NR:ns ## COG: HI1455_1 COG0225 # Protein_GI_number: 16273361 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptide methionine sulfoxide reductase # Organism: Haemophilus influenzae # 22 209 20 202 205 217 55.0 2e-56 MKTKKLLISILFLILFIIGFKLIINNYSKPSIIQKTETGVSNLSSVKNKGEIYLAGGCFW GVEGYFKKIPGVLDTIVGYANGKTDETSYEKISKTDHSETVKISYDQDKVSLQDIIEYYF RIIDPTSVNKQGNDAGRQYRTGIYYTNENDKLVIDEIIRQVQEKHKDKIAVEVEPLKNFV LAEEYNQDYLDKNPGGYCHINISLAEKPLETRKIDKNKKELKKKLTKEEYKVTQENETER AFSSKYDDFYEPGIYVDVVSGEPLFSSSDKYDAGCGWPSFTKPIDAGINYKTDNTRGMER VEVRSKKGDSHLGHVFNDGPKEKGGARYCINGAALRFIPLDKMEEEGYGAYIDKVK >gi|229269859|gb|GG666052.1| GENE 2 3371 - 4117 893 248 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486500|ref|ZP_03916816.1| ## NR: gi|227486500|ref|ZP_03916816.1| hypothetical protein HMPREF0072_1903 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1903 [Anaerococcus lactolyticus ATCC 51172] # 1 248 1 248 248 354 100.0 3e-96 MIIKKKFATVLIFATVFTGLIAGTRNEAYAYYSIEDGKIYGDIVGPFRSMEAVKDAAKKA KEKNPKMDTYEITYFLDYFYYQLEGDASNFGDPLQFDNEEDNKLYATRNKYLPKIDSFSN LTSEEAKKYIDRINGTDDESYMKEIVSEAQKLNNSRNKGKKVVKNVEKKVVKNIEKKETN HKPLTKEEQIEELKKSIEANKTAKKSAENLIAIAPKTVAPVRDKLDNLIKKADDIIKRSE AVLEKIKL >gi|229269859|gb|GG666052.1| GENE 3 4249 - 5475 1466 408 aa, chain + ## HITS:1 COG:CAC0463 KEGG:ns NR:ns ## COG: CAC0463 COG0265 # Protein_GI_number: 15893754 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Clostridium acetobutylicum # 39 374 27 343 348 194 38.0 2e-49 MNNRSYKKDSGRFSSFAAALIGAIVGGFIVYFLLAGVNSNNKEVSKNTSQIETRQENTKP IEVKENESMESVVVKKSIDSVVGINTVSKVTRQSFFGPQSGYVEGIGSGSIVSEDGYIVT NSHVVSDGEAKEINVLFNNGETAPAKLVWNDASLDLAIIKVDKNNKNLKAIDLGDSDKMG VGDRVVAIGNPLGFQLQSTVTSGIISGLNRSVSFNTGVQMDGLMQTDAAINSGNSGGALL NSKGELIGINTAKAGNSDGIGFAIPINTVKPVIEKIRENGKFDSVYLGITGQSLDYLRQL QYLKDNIKAKSGIYVVSVFTDEKAIKEGDVITAIDGKPVKDMGALKKLLLAYNLGDTVKL TIERDGKEKEVDFKFTVDSSNVDEYKSATPNKSLENKEEKSNPFFNLP >gi|229269859|gb|GG666052.1| GENE 4 5637 - 5960 404 107 aa, chain + ## HITS:1 COG:no KEGG:Apre_1305 NR:ns ## KEGG: Apre_1305 # Name: not_defined # Def: putative helix-turn-helix protein YlxM/p13 family protein # Organism: A.prevotii # Pathway: not_defined # 1 107 1 107 107 122 72.0 7e-27 MEKIVKIAQLYDMYGPLLNDKQRDVINCYYNEDLSLQEIADSDGKSKQAISDMINRSVDK LFEFENELSLLKSKTELKASLFEIRELIESSNNKEAIERLTEIIEQI >gi|229269859|gb|GG666052.1| GENE 5 5969 - 7309 1678 446 aa, chain + ## HITS:1 COG:BH2484 KEGG:ns NR:ns ## COG: BH2484 COG0541 # Protein_GI_number: 15615047 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Bacillus halodurans # 1 427 1 430 451 473 59.0 1e-133 MVFESLSDRLQEALGKLTGKGKLNEKDIDNAMREIRLSLLEADVNYKVVKDFVKTIKERS LGTEVMNSLSPGQMVVKIVNEELTSLMGKENSKLALRGGTPHMVMMVGLQGSGKTTHSGK LVKMLQKENRNPMLAALDIYRPAAIEQLKVVGKQANTFVFEKGKEDPVKIAKEAKDYARI NNYDTVILDTAGRLQIDTDLMDELKAIKEVVKPDEILLVVDAMTGQEAVNVAKSFDDYLD ITGVILTKLDGDARGGAALSIRQVVGKPIKFIGVGEKLDDLEPFYPDRMASRILGMGDVL SLIEKAEEQFSLENAKKLEAKMREQTYSLDDFMEQIQQIRNMGPLEDLLAMIPGVNSKML KGVNVDDAGFDKIEALINSMTKEERDKPEIIGNSRKTRISNGSGVDVRELNKLLKQFKEL KKMMKKMGGLQKKGKRGRGFPKMPFF >gi|229269859|gb|GG666052.1| GENE 6 7327 - 7572 415 81 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486504|ref|ZP_03916820.1| ribosomal protein S16 [Anaerococcus lactolyticus ATCC 51172] # 1 81 1 81 81 164 100 6e-40 MAVKIRLKRLGQKKKPFYRVVVADSRRARDGRFIEEIGYYNPVSEPKVFRVDNEKAKQWI KNGAQPTSIVEKLFKDNDVLA >gi|229269859|gb|GG666052.1| GENE 7 7575 - 7799 308 74 aa, chain + ## HITS:1 COG:no KEGG:Apre_1302 NR:ns ## KEGG: Apre_1302 # Name: not_defined # Def: RNA-binding protein # Organism: A.prevotii # Pathway: not_defined # 1 74 1 74 74 78 79.0 1e-13 MKELVELIVKELVTDKEAVEILENREGSEVNILIKVAEEDKGRVIGVRGNIINSIRTIAR SAAIKENVKVNIKI >gi|229269859|gb|GG666052.1| GENE 8 7796 - 8281 712 161 aa, chain + ## HITS:1 COG:BH2480 KEGG:ns NR:ns ## COG: BH2480 COG0806 # Protein_GI_number: 15615043 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Bacillus halodurans # 3 155 5 166 173 82 33.0 4e-16 MRISVGEIVKTQGIRGEVKVKSLSDNEDRFKIGAKLFIDDEIVTIKRAYKQKAMLVLGFE EYDNINDILKFVGKDLTIDEKDLGKLAEDEVYIKDLMGLKVISNGQKVGEIVDVITGVYP NDVYVIKTDRSEVLLPAIKNTIKKIDTEEKIIEVENFSDYE >gi|229269859|gb|GG666052.1| GENE 9 8274 - 8996 789 240 aa, chain + ## HITS:1 COG:lin1906 KEGG:ns NR:ns ## COG: lin1906 COG0336 # Protein_GI_number: 16800972 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Listeria innocua # 3 225 2 228 245 210 45.0 2e-54 MNKVTLLTLFPESFEFLGTYGVIGRAIENKKLELEIVDMRDFANNKHNHVDDTVYGGAAG MLIRPQVIYDALLSVKTAKSKVAFMSATGKVLDQKLAIDFASIEHLIIICGHYEGIDARI TNHYVDYEISIGDYVLTGGEIPAMVLIDSMARFIDGVVGKEESLTTDSHYNILLQQDEYT KPRVFNGYHVPQELVSGDHKKIAAWNKKNAIEKTKRVRPDLYEKYLREESKDGINQKNRK >gi|229269859|gb|GG666052.1| GENE 10 8968 - 9315 584 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227486508|ref|ZP_03916824.1| ribosomal protein L19 [Anaerococcus lactolyticus ATCC 51172] # 1 115 1 115 115 229 100 2e-59 MELIKKIESENLRKDNFDFNVGDTVRVSYRIKEGDKTRLQDFEGTVIYISEGGVGKTFTL RRISYGVGVERTFLYHNPRIEKLVVTRRGKVRRAKLSYLRDRQGKAAKVKEKTNY >gi|229269859|gb|GG666052.1| GENE 11 9474 - 10349 798 291 aa, chain + ## HITS:1 COG:no KEGG:Apre_1298 NR:ns ## KEGG: Apre_1298 # Name: not_defined # Def: transcriptional regulator, XRE family # Organism: A.prevotii # Pathway: not_defined # 1 290 1 291 292 284 61.0 3e-75 MINSRKEFGKKLIEIREIKGLRQADVADLSSLSQRTVGRLERGEIESASVDSLVELSKVY DIDILSLYKKYLYGNLCILEDIKSMLDINAIFLPREIRINLLEKIKLIKSVKDLEAKRYE LDLLELFIKYLNSEINDETLRDNFEDLSGNKIKRENFSKLDFSPVELRILLNIASDFKSF KNIDRLEIFERCKNQDDEMIKLLAYNNLSNLYVINKNYRDALKISNEGIEYSRNNSSIDG LLYLHFINFLAAYRANKNYEEALLVTKVLLKNNLNTELNMMVNKNINNILG >gi|229269859|gb|GG666052.1| GENE 12 10601 - 11737 571 378 aa, chain + ## HITS:1 COG:SP1342 KEGG:ns NR:ns ## COG: SP1342 COG1132 # Protein_GI_number: 15901196 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Streptococcus pneumoniae TIGR4 # 45 344 73 369 535 82 26.0 9e-16 MTRLIERFSRIVSYKEGALIKSTVIFFILWSVVFFTLRLSRSRLKARISYLWNVRVKKEL MENILTRDPVYFESKDKASYISLFNNDLKFIEENYLFSVDWIISNLVLLLVCLGYGFTIN IEITMIIFVFGIIVMLISKFISSISSNENEKYMKSLNSYNEILNDGFYGYKTLLSFNKTG HFLRKFGQRTKDNEKIHEKSLFLNSSRISVINISSMILQTFLMLLSALFVYWGKIEAFYF PVLLSLMNIIIWPMQEIADSYGNIISTRKIRERILKDFAFEEDELSDEGKSDKEISVENS DIFFDDVNFSYGNKEILHGASFVIHNKDHVIISGASGTGDSDIMMTDTINPLKSKFKGFH KTFKQDDLGLSLSSFLLN >gi|229269859|gb|GG666052.1| GENE 13 11781 - 12071 140 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486511|ref|ZP_03916827.1| ## NR: gi|227486511|ref|ZP_03916827.1| membrane protein [Anaerococcus lactolyticus ATCC 51172] membrane protein [Anaerococcus lactolyticus ATCC 51172] # 1 96 1 96 96 114 100.0 2e-24 MIIFRVFFKIILFPISIALSIITLFLTFVLGLSTIFFKLISFIAIMGFLGSVYHGEKALA IEAIILAYLFSPYGLPVLGYFIIEGIEEVNERIKTI >gi|229269859|gb|GG666052.1| GENE 14 12158 - 13135 875 325 aa, chain + ## HITS:1 COG:no KEGG:Amet_3992 NR:ns ## KEGG: Amet_3992 # Name: not_defined # Def: replication initiator A domain-containing protein # Organism: A.metalliredigens # Pathway: not_defined # 5 290 4 312 319 209 44.0 1e-52 MKEIVKFEYYYGNEAEQYSFFRIPKTLFTDLNFKKLSVEAKILYGILLDRMSLSIKNKWL DEENKVYIIYTIEEIMEVLNWGRNKSVKVMKEIEEIGLLEKKRLGLGKPNLLYVKNFIYT ENNKTTEVSKANLKKFKKQTSGSLENKPQEVSKEDSNNTNINNTETNNTDFNNTTPISPL EKLGEKSKKTLEEEELKETIKKNISYETFEKVRIEEKKQVDVMINVLVKALTSFTKIKIR GRHISNENFKEKFLSLNYKHIDYVLKYLRENAPKDIRNINAYLLTLLYNADENIRNIEVI KRENQKRENYDYSNDEDIWREILNT >gi|229269859|gb|GG666052.1| GENE 15 13150 - 14007 629 285 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 39 282 27 281 282 122 34.0 5e-28 MELIKEILEQKIKNAETNSPSNDEENRSYIDQETGLKYCAKCKTPIEKEIDFFGEIKKVG ILCQCKKERQKLEEEKRKENKRLLKIEHLKKECFSDPILLNWNFKNMDKDSEHEKVAKNY VEKFDEIYENNIGLILTGNVGCGKTYLASAIANALLEKEISVKMTNFSVILNDMTNFEID KSKYIDNLNHKKLLIIDDFGMERDTDFAAEHIFNIIDSRYRSGKPLIITTNLNISALTNP ETIKDKRIYSRILEICSPIIFTGENRRIEKMKEKSKLAYEILKKE >gi|229269859|gb|GG666052.1| GENE 16 14022 - 14513 458 163 aa, chain + ## HITS:1 COG:no KEGG:SPAP_0867 NR:ns ## KEGG: SPAP_0867 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 163 1 161 161 79 42.0 4e-14 MQNDDINSRTIAIVKKASIVTAKQVINLMKKILEINKHKAQTEQSRPLEKFKKVKVKDLV KKGKVETLELNDIDLKALKKELKRYGVKFSIKKDLENGNNIIFFQAKDIKVMEQAFKKTV QKFTKDKSRKRKSLIERLNNFKDKVKDTIDRDKVKHKHQEQSL >gi|229269859|gb|GG666052.1| GENE 17 14964 - 15968 669 334 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 155 303 157 307 591 106 37.0 5e-23 MINSKILNEIIKDIKNVFKIRDKKKFVLENLPYLLFFYIGNIFASHVNSYIGGDIIDRIL VAFSQIDTLNYIPSLKIKNLIPGLILSVVIKLILMQKKKKAKKFREGREYGSARWGNEKD IEPYIDRKFENNVLLTQTERLTMNNRPKNPKYARNKNVLVIGGSGSGKTRFFVKPNLMQM HSSYVVTDPKGTLVLECGKMLERNGYEIKILNTINFKKSMRYNPFAYLKSEKDILKLVQT IIANTKGEGEKSTEDFWVKAEKLYYTALIGYIWYEAPKEEQNFTTLLAMIDASEVREEDE NFKNAVDYMFEALEKEKPNHFAVKQYKKYKLLAS >gi|229269859|gb|GG666052.1| GENE 18 16921 - 17268 169 115 aa, chain + ## HITS:1 COG:lin2373 KEGG:ns NR:ns ## COG: lin2373 COG4823 # Protein_GI_number: 16801436 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Listeria innocua # 16 113 191 288 298 60 42.0 1e-09 MKNEDKSKIAKVFHTDYHYFESWIENFAYIRNICAHYGRLYGAKLTKSPKLYKEYLKKNI SNNTIFATLVNLKIVSEEENYKKFYHDLTELIARYENIELRHVGFIENWKELLKP >gi|229269859|gb|GG666052.1| GENE 19 17458 - 17781 385 107 aa, chain + ## HITS:1 COG:no KEGG:HMPREF9243_0143 NR:ns ## KEGG: HMPREF9243_0143 # Name: not_defined # Def: hypothetical protein # Organism: A.urinae # Pathway: not_defined # 1 106 1 102 103 72 50.0 6e-12 MEREMLNINGNLVGEIKTTAIDTKEGEKEVANFTIVRKNKEEGKVKKEYIYCNLYGEKAK SVKEFKSGEYIHIFGYFKETKKEDKTFKNFIVKHINKIEKEEKEEEI >gi|229269859|gb|GG666052.1| GENE 20 17782 - 17895 67 37 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|320535241|ref|ZP_08035366.1| ## NR: gi|320535241|ref|ZP_08035366.1| hypothetical protein HMPREF9554_00080 [Treponema phagedenis F0421] hypothetical protein HMPREF9554_00080 [Treponema phagedenis F0421] # 1 37 1 37 52 64 91.0 3e-09 MEFFTQAVNVLKILVTAIGAGLGAWGVINLMEGYGND >gi|229269859|gb|GG666052.1| GENE 21 18196 - 18435 114 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLLICRVSNTHGENVYTKTLTHFRMYKSRRLNLSNGNYHQRWCVCGLVRMVVMKVHISL QAIRRELNTGLEEEPKRIQ >gi|229269859|gb|GG666052.1| GENE 22 18818 - 20554 1134 578 aa, chain + ## HITS:1 COG:BH0224 KEGG:ns NR:ns ## COG: BH0224 COG3344 # Protein_GI_number: 15612787 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Bacillus halodurans # 4 458 5 406 418 183 31.0 9e-46 MGLITSRENIKLAYRSIKGNKGSHTAGVDGRTINHLSKLNEEEYISLIQKQFHWYKSRPV KRVEIPKPNGKTRPLGIPTIVDRIVQQCILQILEPICEAKFHDSSYGFRPNRNTEHAIAE CARLMQIQHLHYVVDIDIQGFFDNVCHSKLIKQIWHLGIRDKKLICIIKEMLKANIVMPN GETIIPTKGTPQGGILSPLLSNIVLNELDWWVSSQWATMPTHYPYKQKTNSKGTEIKSHT YRALRSSKLKEIYIVRYADDFKIFCSNYYDAKRTYQAVKQWLEDRLKLTINEEKSTITNL KQRYSEFLGFKLKVKPKGKKFVVQSHISDKALKNAKENISKCVADIKRPANEKEQYKAIA RYNATVSGLHNYYQIATNVSLDFAKIAFHIKKQMNNRLDIKTSGTLNKGFIKEKYGKSKQ LRFLNGHPLIPAGYVRTKDAKHKKKVVNKYTVKGRAFIHKNLQIDVDTLVWLMKHPVLDK SIEFADNRISLFAAQYGRCGVTGVKLTPNDIHCHHKIPLEQGGTDSYSNLILVTEAVHIL IHATKEDTIQKYIKELGLTLKQIEKCNKLRKMAGLPLI >gi|229269859|gb|GG666052.1| GENE 23 20866 - 21084 316 72 aa, chain + ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 72 1 72 72 137 98.0 3e-33 MALNYKPLWIQLAKKGLKKTDVIAMAGLTTNVMAQMGKDKPITFKNLERICKALSCTPND IISFEDNFSEEE >gi|229269859|gb|GG666052.1| GENE 24 21122 - 21286 145 54 aa, chain + ## HITS:1 COG:no KEGG:SPH_1133 NR:ns ## KEGG: SPH_1133 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_Hungary19A_6 # Pathway: not_defined # 4 49 16 61 89 85 89.0 5e-16 MQVVLGFDESEDNVNQGTGQITTFNQLGFKGYSDKSDGWYLPKNMNDVAKFTFK >gi|229269859|gb|GG666052.1| GENE 25 21488 - 21778 142 96 aa, chain + ## HITS:1 COG:MK0175 KEGG:ns NR:ns ## COG: MK0175 COG1321 # Protein_GI_number: 20093615 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Methanopyrus kandleri AV19 # 2 92 36 125 158 68 37.0 3e-12 MDLANYLEYKRPTVTRMLKKLENKGLIIYGEDKIIHLTEESKTFCKNMYTRHKYLTDVFI RLGIDTKKAENEACLIEHVISDETFEKLKKHFDYNL >gi|229269859|gb|GG666052.1| GENE 26 22084 - 23823 228 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 337 557 2 226 245 92 25 3e-18 MKELYARLFNYVPERKKYAYIAMVLSALSVFIYMFAYWYLWKTIKLILVDFQLDVALNYS LKIVFLMILRGVVAIIGLLSSHFMGFRLETNLRKKGLYNLLDASFSFYDKNNSGKIRKII DDNAGNTHSTVAHLIPNNVIAVLTPIAMLTLTFMVDIRLGILLILVCLVGVVQYRLMYNA PELMDKFSKALENMSAATVEYIRGMQVIKIFGVGVKYYKTLIESIIDYKDNVYAYSQACK KPYVAFQVLFNSFYAFMVPLLAYFILRGGDANLLLAKLVFFTMFSGVILSSFMSIMFTGT DNYSAKLTLDKLEGLIENMEREKIEFGTDEKIDRFDIEFSNVSFKYDDNFILKDFNLKLY ENKTYALVGSSGSGKSTIAKLISGFYPIDKGKITIGGKNISSYSEKTIQENIAYIFQHAK LFKKSIFENVLVGNPKASREMVLNALHLASCDSILDKFEKRENTIIGSKGVYLSGGEIQR IAIARAILKDANIIIMDEASAATDPENEYELQRAFSSLIKNKTVIMIAHRLSSITNVDEI LFIDDGSVIERGSHEDLIAAKGRYKKLYDMYNTANEWRI >gi|229269859|gb|GG666052.1| GENE 27 23823 - 25544 216 573 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 341 556 33 254 329 87 31 7e-17 MKRLIMDKLKLTENGAIGVIKSTISFFFYYTSFILPLMVVMFFTDGVLEEKIQKPSVYTI VIFIVIIIMYVIISINYQITYNETYKESANLRIEIADYFRKMPMSYFSKHDLSDLAQTIM QDVGQVEHALAHAIGNYLGFIIYFILMAILMLFGNWKMALAIIIPVLLATIVLFLTKKNQ IYYRTKHFKKLRDISEDLQASIEMSQEIKSYGLKNPTKFSIENSLKESEKLQWKSELSQA IPLSLAQYIGILPLGLCLAVGSRLLITGEITLLYFVGFIIGAAKISDGVLGLASYLGEIF YLDARIKRIGEIKDYPTSSGQKVEMDSYDIELTNVEFSYDGKNKVIDGLSFTAKQGEVTA LVGPSGCGKSTLLKLISGLYDYDKGYIKIGGHIIKNMNAEDLYKKITVVFQDVTLFNTSV LENIRIGKLDASDEEVKKAAKLAGCEDFISKLPNSYDSFIGENGSMLSGGERQRLSIARA ILKDAPIIILDEISSSLDVENELKIQDALNSLLKDKTVIIISHRLKSIQNVDKIVVLNDG ILDAYGDHEYLLKNSKVYKDMINKTELTETHKY >gi|229269859|gb|GG666052.1| GENE 28 25568 - 26155 366 195 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11107 NR:ns ## KEGG: HMPREF0837_11107 # Name: not_defined # Def: major facilitator superfamily permease # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 189 1 188 194 90 35.0 5e-17 MNNKNKITIKDLIMTGIFSAIYFIFSWIVGIPLGLMVITYLAYPFVYAIAGAIISMFFMS KVPKAWLTFVFTFIPGLPFFFMGFPPIFIAYFVLCSIFAELSRRFTGYKSIKGMKLAHVF ISLTSLGQFLMIFVAKDLYYKLTVASMGEAYANQLLKLPIWILFALFVSVVIGAYLGGNI GEKILRKHLNGNDFE >gi|229269859|gb|GG666052.1| GENE 29 26532 - 26828 79 98 aa, chain + ## HITS:1 COG:no KEGG:BLD_0420 NR:ns ## KEGG: BLD_0420 # Name: cbiQ1 # Def: cobalt ABC transporter permease # Organism: B.longum_DJO10A # Pathway: ABC transporters [PATH:blj02010] # 1 93 131 225 233 65 37.0 8e-10 MFRYTPIIKNEFKHISEAMKLRGIGKNMVFSNPLLYMEYLIIPLLFSATNIGEDLSQAAF SKGLSIDGKKYRCSLILFSYLDILAILYIFLLLYIVRG >gi|229269859|gb|GG666052.1| GENE 30 26833 - 28236 223 467 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 283 463 43 242 329 90 32 1e-17 MIDFIDTEISYSNGTKIGPINLNIKAGEVHLFAGKSGSGKTSICKLVGGIVDNIDDIQRK GQVLIRGIDISKLSIKDLVSNIGFVYQNPKNQFFTDNSTTELVLATENLGYSKDESLNRL EKLTKYFDISNLLDRNVLELSGGEKQIICIVASLMSNPDIVILDEPTSNLDINTIKKVRN ILFKLKEMGKTILISEHRIYYLKGLVDRISLVNKGKIIKTYDASDFFKMDERKRVSLGLR TFKEVSICKKSNTSVENPTINLAIKNLKYSYKRGGNLLNIEKLNLYGGVVYFLLGENGQG KTTLGRILSGLIKQNEGKIEVDGKVVTCSDRLKLSYLVFQDVNTQLFTASVKEEIKLNND YESIDNLLNILNLYEKKDSHPQYLSGGEKQRTSIGAAIALNKRILIADEPTSGMDYENMI NISKLLRKYAELGNIVLIISHDIEFINYLSDKIICLDCGMIKEYDQT >gi|229269859|gb|GG666052.1| GENE 31 28499 - 28813 394 104 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11443 NR:ns ## KEGG: HMPREF0837_11443 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 104 2 105 105 95 97.0 9e-19 MTSKRLSIEEQIEKKEESIKQLQNQKRQLKKKLNEQERKARNKRLIEKGAVFESIFEESI DLTKDEFYKLIKMLNDEEIRLNIMEILEERIDDNVEKSSEDEIT Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:57:48 2011 Seq name: gi|229269858|gb|GG666053.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD10, whole genome shotgun sequence Length of sequence - 7804 bp Number of predicted genes - 8, with homology - 8 Number of transcription units - 4, operones - 2 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 612 473 ## COG0827 Adenine-specific DNA methylase 2 2 Op 1 . + CDS 1557 - 2681 915 ## COG4646 DNA methylase 3 2 Op 2 . + CDS 2678 - 3565 489 ## COG4646 DNA methylase 4 2 Op 3 . + CDS 3532 - 4290 575 ## COG4646 DNA methylase 5 2 Op 4 . + CDS 4310 - 4525 242 ## SEQ_1253 conjugative transposon DNA recombination protein + Prom 4961 - 5020 80.4 6 3 Op 1 . + CDS 5242 - 5769 757 ## SEQ_1252 conjugative transposon single-strand binding protein + Prom 5792 - 5851 3.5 7 3 Op 2 . + CDS 5940 - 6116 150 ## gi|304439304|ref|ZP_07399220.1| conjugative transposon single-strand binding protein + Term 6122 - 6166 7.0 8 4 Tu 1 . - CDS 6309 - 7679 823 ## SEQ_1250 conjugative transposon mobilization protein - Prom 7713 - 7772 3.4 Predicted protein(s) >gi|229269858|gb|GG666053.1| GENE 1 1 - 612 473 203 aa, chain + ## HITS:1 COG:pli0004 KEGG:ns NR:ns ## COG: pli0004 COG0827 # Protein_GI_number: 18450290 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Listeria innocua # 2 201 419 617 756 189 51.0 4e-48 QRLKNNIEAINVLKALEKENRSARKDEQEILAKYIGWGGLSDVFDEEKEGQWLDARNFLK ENLTGEEYNRARESTLTAFYTPKVVIDSIYESLSNLGFEKGNILEPSAGTGRFIGNLPEE MKESNFYGVELDSISGQIAKELYPNANIQIKGFEETNFSNNLFDVAIGNIPFGEFKVADR EYERNNFLIHDYFFAKTLDKVTS >gi|229269858|gb|GG666053.1| GENE 2 1557 - 2681 915 374 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 364 325 674 1315 231 38.0 1e-60 MEVMPKALDASEITVRMGATWIPEQDYKKFMFDLLKTPVSSRWNIDIKYSDFTGEYRVEG KSSDRDNDLAYFTYGTNRVNAYKLIEDTLNLRDTKVFDQVEDSDGKKKSVLNQKETMLAR SKQEMIKEEFKSWIFDDVERRNRLVEDYNERFNSIRQREYDGSNLTFEGMNPEIELRAHQ KDAIARGLFGGNTLLAHEVGAGKTFEMIGIAMESKRLGMSNKSMFVVPNHIVEQFGREFN ELYPGANVLCATEKDFTPDRRKRFCSRIATGSFDAVIIGHSQFEKIPISKERQEYELQGQ IDEIIDYIDEYKRERDQRFTVKQLEKTKKKLETKLEKLNADYKKDDVVTFEELGVDKLFV DEAQPTKTSIYFLK >gi|229269858|gb|GG666053.1| GENE 3 2678 - 3565 489 295 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 281 685 987 1315 163 31.0 5e-40 MRNVAGITSTDSQKSSDMLMKCRYMDEITNNKGLVFATGTPVSNSMAELYTMQRYLQYDE LKKMKLQHFDSWASTFGETITAIELNPEGNGYRSKTRFAKFYNLPELMNTVKGFMDIKTA DVLNLPTPIAHYETIKTKPTEEQKEILETFSERADKVRDKQVDSSVDNMLLITNDGKKMA LDQRLINPLLPDDPNSKVNTCIKNVFSIWDKYKDKKSAQLIFCDMSTPSSDFNIYDDIKT KLIDMGVPENEIEFIHKAKNNMEKDAIFDKVRKGEIRVFLVQHRKWEQVLMLKTN >gi|229269858|gb|GG666053.1| GENE 4 3532 - 4290 575 252 aa, chain + ## HITS:1 COG:AGpT188_2 KEGG:ns NR:ns ## COG: AGpT188_2 COG4646 # Protein_GI_number: 16119916 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 232 993 1213 1315 124 32.0 2e-28 MGAGTNAQDKLIAIHDLDIPWRPADLSQRAGRIVRQGNENKEVHIFRYVTENTFDAYLFQ TLENKQKYISQIMTSKTPVRVAEDVDEATLNYAEIKALATGNPLIKEKMDLDVEVSKLKM LESNFKSNLYKLEDKVVKFYPKEIERLKERIENLKEDIKNVEPYREVDKNLKEDNKFTSL IIDGKKYIDKKIAGEFLLNKIKGVKIYREMDKDGEKIGEYRNFDLSIKYDSFFNKYNFIL KGKGEYRGEFDR >gi|229269858|gb|GG666053.1| GENE 5 4310 - 4525 242 71 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 1 68 3708 3775 3975 93 73.0 4e-18 MDNVLDKLPERLENTISKLKDTEEQFQTAKIEIQKTFPQAELLKDKTLRLAEVNNLLDMG KSEDISQETHY >gi|229269858|gb|GG666053.1| GENE 6 5242 - 5769 757 175 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1252 NR:ns ## KEGG: SEQ_1252 # Name: not_defined # Def: conjugative transposon single-strand binding protein # Organism: S.equi_equi # Pathway: not_defined # 1 174 161 352 479 156 52.0 3e-37 MNIKKGNVIETEFGDTMVLDVKDNQATLFDGNQFILATGVEFNKESGKYEWDSVRYASDI KTIANMENTNFESMKNTIDFLAEYNHKEFVKGIISLETGVENENVLNNAYDNYMNDSVMG LIDEKFIEYIDEEELKENLEANQEQGDKEMKDIDNKEKDTLNIDGNIATDIELKI >gi|229269858|gb|GG666053.1| GENE 7 5940 - 6116 150 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|304439304|ref|ZP_07399220.1| ## NR: gi|304439304|ref|ZP_07399220.1| conjugative transposon single-strand binding protein [Peptoniphilus duerdenii ATCC BAA-1640] conjugative transposon single-strand binding protein [Peptoniphilus duerdenii ATCC BAA-1640] # 1 58 323 380 380 77 94.0 2e-13 MGKDNKEYTSLKVYSAKLLKAKEHTKAKASTIEKLKEFKAKGDMKVDEKKKKDNSIER >gi|229269858|gb|GG666053.1| GENE 8 6309 - 7679 823 456 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1250 NR:ns ## KEGG: SEQ_1250 # Name: not_defined # Def: conjugative transposon mobilization protein # Organism: S.equi_equi # Pathway: not_defined # 1 456 1 457 457 479 62.0 1e-133 MAITKIHPIKSTLKIALDYIMNSDKTDGKILISSLNCNPITAHLEFEQTKIECNSKAKVL ARHLIQSFFPGETTAEEAHQIGIELCDKILKGKYEYVLTTHIDKGHIHNHILFNNVSFET GKAYQSNKKTYHQIRNHSDDLCRKYKLSVIDEDYVKFKEKYKTNGKSYKEYIEFNKGKSW KHKLQISIDHAINKANSYENFLKLMEEYGYEIKLGKYLSFRHKKQGEKGRFIRAKETTLG KDYTKDKIKERIENKVNENYKNSEVYYVKKSYKKFDNIIGIESNEKVKSSKGYEIWARKH NMNTMAKTLNQLRKYGLSSSMDLENKLQEEAVNRQEILNKIKDVEKVMSEIYTVIEDINT IKINKVIYKTYKENTNDKDFYSEYKPQIIAYEKAINTLEKCQYKNLSIKELSKLYDEYKN KKDILMDDYANENILINELTQLRKNTDKYIYNELYK Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:58:06 2011 Seq name: gi|229269857|gb|GG666054.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD11, whole genome shotgun sequence Length of sequence - 2914 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 971 746 ## SEQ_1253 conjugative transposon DNA recombination protein + Prom 1573 - 1632 80.3 2 2 Tu 1 . + CDS 1875 - 2913 874 ## COG4646 DNA methylase Predicted protein(s) >gi|229269857|gb|GG666054.1| GENE 1 3 - 971 746 322 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 1 290 1538 1829 3975 271 54.0 2e-71 YDIDVQSFNQQFPDYYNDIYVFNKNLEINGAYQNLAHINEENKITFNINLSQEEKSKIEE IRDKKEVLFKLIDKDIKEKGEYYFDPQNEEYLLLSKKIEEGLLKIPDSIKETIDGKEGFD VELILDIKEKTLRQNLRYNGYILNSNRAIKYKSYKDILNNLPYLLDDKHREVLLNGYLNQ QIENDRTRQEENPFKEGMSVRYKGKEYTITAINDATSPKTIELEDSTGLMNGFITGSETI LFNDYKNLDLEVYKSSEKEQQSIDKGELVEQISFEDIDNNNEEEVKKDKKTDRENIEGVS EVSLENYKIINEEENLPPSLAS >gi|229269857|gb|GG666054.1| GENE 2 1875 - 2913 874 346 aa, chain + ## HITS:1 COG:mll9333_2 KEGG:ns NR:ns ## COG: mll9333_2 COG4646 # Protein_GI_number: 13488153 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA methylase # Organism: Mesorhizobium loti # 70 313 2 278 636 66 22.0 6e-11 MDKKSEDVRRYISERAEFLGAIRLPNRTFKGVAGTEVTSDIIFLKKRDRLLKLDEDWVKL DEDEKGLIYNKYFVDNPQMVIGTMEEIPSRFGTSLACIENKDISLEEGLKKAIKNIQGRY EEAQINDDLGEETIPADDSVKNYSFALVDNEIYFRENSIMQKISLNEKDKDKVKEYLRLN ESLRKVITYQREDYSDEEIKKEQENLNKFYDDFNSKHGRLNSKTNKKLFREDANFSLIST LEKLDKEGNFIGKSDIFNKRTIKKAAIIDHTDRAIDALVLSISQKGKINFDYMEELTGKS RDKLIEELKGEIFLNLDSFEPNDINPFKSAKELGDFSRPYVSADEY Prediction of potential genes in microbial genomes Time: Wed Jun 22 21:58:31 2011 Seq name: gi|229269856|gb|GG666055.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD12, whole genome shotgun sequence Length of sequence - 70547 bp Number of predicted genes - 62, with homology - 61 Number of transcription units - 30, operones - 13 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 449 - 508 10.9 1 1 Op 1 . + CDS 601 - 1092 416 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 2 1 Op 2 . + CDS 1082 - 1657 607 ## Shel_11370 hypothetical protein + Term 1667 - 1721 6.3 - Term 1660 - 1701 4.1 3 2 Op 1 . - CDS 1716 - 3494 2776 ## COG1164 Oligoendopeptidase F 4 2 Op 2 . - CDS 3508 - 4332 940 ## Apre_0057 hypothetical protein 5 2 Op 3 . - CDS 4333 - 5016 489 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 6 2 Op 4 . - CDS 5032 - 6129 1474 ## COG1929 Glycerate kinase + Prom 6795 - 6854 8.6 7 3 Tu 1 . + CDS 6948 - 7805 651 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 7871 - 7913 8.1 - Term 7864 - 7896 2.5 8 4 Op 1 . - CDS 7904 - 8248 435 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 9 4 Op 2 . - CDS 8330 - 8596 372 ## Spirs_3327 flavocytochrome c 10 4 Op 3 . - CDS 8660 - 9022 369 ## Clos_2690 flavocytochrome c - Prom 9130 - 9189 4.5 11 5 Tu 1 . - CDS 9199 - 9771 860 ## COG3976 Uncharacterized protein conserved in bacteria - Prom 9794 - 9853 8.6 + Prom 9971 - 10030 6.1 12 6 Op 1 11/0.000 + CDS 10080 - 10649 991 ## COG0450 Peroxiredoxin 13 6 Op 2 . + CDS 10651 - 12180 414 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 12186 - 12213 -0.8 + Prom 12196 - 12255 9.2 14 7 Op 1 4/0.000 + CDS 12275 - 13624 1709 ## COG0402 Cytosine deaminase and related metal-dependent hydrolases 15 7 Op 2 . + CDS 13625 - 14956 310 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 14985 - 15023 1.2 + Prom 14975 - 15034 4.2 16 8 Tu 1 . + CDS 15065 - 15829 600 ## COG0789 Predicted transcriptional regulators + Term 15916 - 15943 -0.8 + Prom 15868 - 15927 10.9 17 9 Tu 1 . + CDS 16132 - 17583 1862 ## COG0516 IMP dehydrogenase/GMP reductase + Term 17595 - 17636 7.1 + Prom 17805 - 17864 9.2 18 10 Tu 1 . + CDS 18098 - 18778 945 ## Apre_0499 YodA domain-containing protein + Prom 18801 - 18860 3.4 19 11 Op 1 . + CDS 18990 - 19706 750 ## Apre_0500 periplasmic solute binding protein 20 11 Op 2 25/0.000 + CDS 19735 - 20139 289 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 21 11 Op 3 42/0.000 + CDS 20136 - 20807 320 ## PROTEIN SUPPORTED gi|90020817|ref|YP_526644.1| ribosomal protein S16 22 11 Op 4 . + CDS 20801 - 21595 996 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components + Term 21685 - 21740 12.5 - Term 21673 - 21728 12.5 23 12 Op 1 13/0.000 - CDS 21733 - 22497 207 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 24 12 Op 2 9/0.000 - CDS 22484 - 23359 1159 ## COG4120 ABC-type uncharacterized transport system, permease component 25 12 Op 3 . - CDS 23360 - 24346 1215 ## COG2984 ABC-type uncharacterized transport system, periplasmic component 26 13 Op 1 . - CDS 24767 - 26842 2765 ## COG2217 Cation transport ATPase 27 13 Op 2 . - CDS 26842 - 27174 704 ## gi|227485817|ref|ZP_03916133.1| conserved hypothetical protein - Prom 27218 - 27277 7.3 + Prom 27528 - 27587 4.8 28 14 Tu 1 . + CDS 27649 - 27975 217 ## Apar_0213 putative protein-S-isoprenylcysteine methyltransferase-like protein + Term 27998 - 28048 7.4 29 15 Op 1 . - CDS 28056 - 29075 1074 ## COG0078 Ornithine carbamoyltransferase 30 15 Op 2 . - CDS 29077 - 30066 1095 ## Apre_0032 hypothetical protein - Prom 30100 - 30159 3.8 + Prom 30036 - 30095 6.4 31 16 Tu 1 . + CDS 30191 - 30478 371 ## Apre_0024 hypothetical protein - Term 30549 - 30604 4.2 32 17 Op 1 . - CDS 30666 - 32711 1518 ## GYMC10_4315 ADP-ribosylation/crystallin J1 33 17 Op 2 1/0.250 - CDS 32698 - 33639 730 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase 34 17 Op 3 26/0.000 - CDS 33636 - 34562 731 ## COG1079 Uncharacterized ABC-type transport system, permease component 35 17 Op 4 24/0.000 - CDS 34537 - 35607 817 ## COG4603 ABC-type uncharacterized transport system, permease component 36 17 Op 5 15/0.000 - CDS 35618 - 37138 1181 ## COG3845 ABC-type uncharacterized transport systems, ATPase components 37 17 Op 6 . - CDS 37196 - 38308 1325 ## COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 38 17 Op 7 13/0.000 - CDS 38349 - 39185 508 ## COG0524 Sugar kinases, ribokinase family - Prom 39211 - 39270 4.4 39 17 Op 8 . - CDS 39296 - 40282 923 ## COG1609 Transcriptional regulators - Prom 40310 - 40369 8.9 + Prom 40323 - 40382 7.1 40 18 Tu 1 . + CDS 40519 - 40659 140 ## gi|227485831|ref|ZP_03916147.1| hypothetical protein HMPREF0072_1234 + Term 40676 - 40722 10.1 - Term 40669 - 40703 4.1 41 19 Tu 1 . - CDS 40721 - 42544 2380 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains - Prom 42720 - 42779 4.2 42 20 Tu 1 . + CDS 43421 - 43681 194 ## - Term 43736 - 43770 3.0 43 21 Op 1 . - CDS 43774 - 43962 194 ## Apre_0020 hypothetical protein 44 21 Op 2 44/0.000 - CDS 43959 - 45575 1850 ## COG4608 ABC-type oligopeptide transport system, ATPase component 45 21 Op 3 44/0.000 - CDS 45565 - 46563 576 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 46 21 Op 4 49/0.000 - CDS 46572 - 48524 2210 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 47 21 Op 5 38/0.000 - CDS 48526 - 49488 881 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 49712 - 49771 6.8 - Term 50007 - 50041 4.0 48 21 Op 6 . - CDS 50054 - 52249 3494 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 52285 - 52344 9.1 - Term 52522 - 52574 6.2 49 22 Tu 1 . - CDS 52598 - 54799 3030 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 54879 - 54938 9.1 50 23 Tu 1 . - CDS 55268 - 56200 236 ## PROTEIN SUPPORTED gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily - Prom 56276 - 56335 9.4 - Term 56330 - 56361 3.1 51 24 Tu 1 . - CDS 56373 - 58253 2147 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) - Prom 58436 - 58495 9.9 + Prom 58228 - 58287 10.2 52 25 Tu 1 . + CDS 58491 - 59432 1445 ## Apre_0012 hypothetical protein + Term 59447 - 59475 2.3 - Term 59424 - 59471 12.1 53 26 Tu 1 . - CDS 59550 - 61100 1216 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 61298 - 61357 8.1 54 27 Tu 1 . + CDS 61475 - 61732 317 ## Apre_0588 transcriptional regulator, AbrB family 55 28 Op 1 2/0.000 - CDS 62178 - 63089 778 ## COG1082 Sugar phosphate isomerases/epimerases 56 28 Op 2 21/0.000 - CDS 63091 - 64053 911 ## COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 57 28 Op 3 . - CDS 64046 - 65404 1264 ## COG1129 ABC-type sugar transport system, ATPase component - Prom 65493 - 65552 80.4 - Term 65435 - 65472 4.1 58 29 Tu 1 . - CDS 65650 - 66477 689 ## CD0422 hypothetical protein - Prom 66585 - 66644 7.0 59 30 Op 1 . - CDS 66651 - 68171 756 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 60 30 Op 2 . - CDS 68164 - 68796 130 ## gi|256544824|ref|ZP_05472196.1| site-specific recombinase 61 30 Op 3 . - CDS 68849 - 69919 653 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 62 30 Op 4 . - CDS 69900 - 70478 308 ## SPAP_0910 site-specific recombinase Predicted protein(s) >gi|229269856|gb|GG666055.1| GENE 1 601 - 1092 416 163 aa, chain + ## HITS:1 COG:BS_yhdM KEGG:ns NR:ns ## COG: BS_yhdM COG1595 # Protein_GI_number: 16078017 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Bacillus subtilis # 1 153 1 152 163 72 31.0 4e-13 MDFAKIYEDYNKDIYRFVLSLCKNHNLAVDICHETFAKAMDKIDTFDGSQDIRAWLFTIA RNTLYDFYRKHNKTNTGFDLNLVEDKKISFVENIADKDLALKVHTFLHSMNEPYKEVFNL RVFGELDFKSIGQIFGKTDNWARVTFYRAKNMIIDYLEEENEI >gi|229269856|gb|GG666055.1| GENE 2 1082 - 1657 607 191 aa, chain + ## HITS:1 COG:no KEGG:Shel_11370 NR:ns ## KEGG: Shel_11370 # Name: not_defined # Def: hypothetical protein # Organism: S.heliotrinireducens # Pathway: not_defined # 5 159 128 283 371 78 28.0 2e-13 MKYECDIVKDLMPLYIDDVLSENSKIFVKDHIDSCEACRKYYKKLSSEVKIPSSKDARKA DLKPLEYLKASLSRKIIKRVLAVVLVIGFFVGSFIFATRYEIPVDSSKVNFYEKDDYLMI KYDGQGDLLYSAGASWENRKVWTIRFWQTPWEKYVTSLYKKEKYDNDLMPLYKAKKVYDE SGILLWEKKDK >gi|229269856|gb|GG666055.1| GENE 3 1716 - 3494 2776 592 aa, chain - ## HITS:1 COG:BH2856 KEGG:ns NR:ns ## COG: BH2856 COG1164 # Protein_GI_number: 15615419 # Func_class: E Amino acid transport and metabolism # Function: Oligoendopeptidase F # Organism: Bacillus halodurans # 2 592 7 598 598 495 43.0 1e-140 MKRSEVEERLKWDTSSIYTDDEGFYKDIEEVKALVEELKKFKGRLTSDLETFKKYLKLEE EFSRKMEKAYVYSSLRSDEDTTVAKYQEMSQVAQNTYVYAASELAFISPEILSTDEKIID KYLEDPEISYLKHHFEDKFRAKDHVLDAKSEAILAAFGKLKNNPQNTYMIFNNADLSFPS VEKDGEEVKISNANFVTLQEDPDRDFRRKVYEKYYETYRQYSNTLASTLDGEFTAHNVEA KLRGYKSAREMSLFANNIPEEIYDNLLEVIHDNADIHRDYTTLRKEYLGVDDLGFHDIYV PLVEDYDRQIDFDEAKEIVLEAIKPLGEEYVKVAREGFEKRWFDVMPNEGKRSGAYSSGS YDTQPFILLNHTNTINDVFTIVHELGHSMHSYYTRSTQPYAYGSYSIFLAEIASTTNELL LLNYMLEHSQSEAETKYLLNYFVNQFKSTVFRQTMFAEFEHKVNKLVENAEPIPAERLHG IYKELNEELFGKDIKVDDYIAAEWARIPHFYMFYYVFQYATGFMSAVALSQKILHGTDAD RQAYLGFLKAGESEYPIEVLKKAGVDMTNKKAMESAMEVARKAMKDLREAIL >gi|229269856|gb|GG666055.1| GENE 4 3508 - 4332 940 274 aa, chain - ## HITS:1 COG:no KEGG:Apre_0057 NR:ns ## KEGG: Apre_0057 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 7 257 6 256 274 130 35.0 7e-29 MKIILALILTLILSSCGFESKSEFKKDMGETASEEKMKFPEIKYVSNTESEDDVDFEKVY GKGHMSSKIYLKDALGFLKKFDFAGKKIGVEVLESSYSPSSYTAVLAFKDKDNIVEKEYG PLVTSDNVFSQVNFDLVEAESGPCLIASQVVIDGKETKSAYYIYNKYMSLIDSFHFENST DDVNVNVYRMSKPVEASENPKPGDLEMAISKRIDKEEEYLKEIFSVYKIESQDVKAEING RKVLVGLMPATSSNRIIELKLLDKDKNDAILSIK >gi|229269856|gb|GG666055.1| GENE 5 4333 - 5016 489 227 aa, chain - ## HITS:1 COG:SP2094 KEGG:ns NR:ns ## COG: SP2094 COG0705 # Protein_GI_number: 15901909 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Streptococcus pneumoniae TIGR4 # 13 221 11 223 225 114 37.0 2e-25 MSINLERLSQARVTSVLMVINIIVFVLMSLSGGSENIENLIRFGANSKILVAHGEWWRLI TASFIHIGFFHILFNMYFFYSLGPIFERLFGSFNFLIIYLISGIFGNLLSFALGSPYTVS AGASTSLYGMLGLAIGLMATYRNDEIIRSFGASFISIVVINVVYSLLAPGVGVYGHLGGF IAGFLLAGIFPILAREISSPRRLISLIILLAGSFALYKIGVKSMIGV >gi|229269856|gb|GG666055.1| GENE 6 5032 - 6129 1474 365 aa, chain - ## HITS:1 COG:SA2220 KEGG:ns NR:ns ## COG: SA2220 COG1929 # Protein_GI_number: 15928010 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Staphylococcus aureus N315 # 2 339 5 351 380 157 34.0 4e-38 MKTLVGIDSIKTFENSVEIGNIFKVNLLSDVEVMPFLDGGEGTVEAMQAIIKGKYKYVNV HNPLNDVITARYILKDDLAVMEMAESSGIRLLYKEELRVMESSSLGFGEMVLDGLNNGAK SFYIGIGDTATNDLGMGMLYALGVRFFDENDNGLNPIAENMGRVARVDIGGLDERLRGVE IRIATSTNQTLFGKNSFLEDRVYRKGASDYDTARLFNGCKHFKKIIEDTLGTGSVDMPAM GSGGGVAWALYMFFRAKISKSMDFILETIDFKDLIRDKDVLILGENVDQFNGAASINVAS LAKRYKKDIKIIFLQDKDGRKIENRGDFDLIFTYKLKDSYDRKDIHKAIAGLAISLDKSI LAREN >gi|229269856|gb|GG666055.1| GENE 7 6948 - 7805 651 285 aa, chain + ## HITS:1 COG:CC3033 KEGG:ns NR:ns ## COG: CC3033 COG0697 # Protein_GI_number: 16127263 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Caulobacter vibrioides # 2 276 23 297 310 153 35.0 4e-37 MLLWGSAIPTIKTTYHVLDVSTTDTGAKILIAGMRFFLAGLITFLYLRLFNKEKIVKSEI NWKFIIIIGILQTFIQYILYYIGLSHIAGVKSSIIQASNSFIVVILSLLLLPGDKINKNM IIALILGTAGIIVTNLGKGASSEGFKFTGDGFILISTSINALCTVLIRKYGQKENSYFLM ANQFIIGSILMIITGLLLKDGSLVFNIRAVILLIYAAFISATAFTIWTVVLKYHSAGEFG IYKLFVPLFGSILSVLILGEAFTLNLAIGMVLVLGGSLVLNSNKN >gi|229269856|gb|GG666055.1| GENE 8 7904 - 8248 435 114 aa, chain - ## HITS:1 COG:FN0050_2 KEGG:ns NR:ns ## COG: FN0050_2 COG1053 # Protein_GI_number: 19703402 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Fusobacterium nucleatum # 6 111 371 477 484 112 54.0 1e-25 MNVPYENLKESIDKYNKAVDDKKDEFGRENLTIKFEKGPFVAVPRVPSLHHTMGGLRIDK NCHVLNKDGNAIKGLYAAGEVTGGIHGANRVGGNAIVDTVVFGRIAGQNAADKK >gi|229269856|gb|GG666055.1| GENE 9 8330 - 8596 372 88 aa, chain - ## HITS:1 COG:no KEGG:Spirs_3327 NR:ns ## KEGG: Spirs_3327 # Name: not_defined # Def: flavocytochrome c # Organism: S.smaragdinae # Pathway: Citrate cycle (TCA cycle) [PATH:ssm00020]; Oxidative phosphorylation [PATH:ssm00190]; Butanoate metabolism [PATH:ssm00650]; Metabolic pathways [PATH:ssm01100]; Biosynthesis of secondary metabolites [PATH:ssm01110]; Microbial metabolism in diverse environments [PATH:ssm01120]; Two-component system [PATH:ssm02020] # 1 74 364 437 593 83 51.0 3e-15 MGKEAGADLVDMGLMQFLYLGIPKKGQITGLVDLGAEKTLFVNKEGKRFVREDGRRDVIC KAIFDQKDGEMWLIHSSDALDFDNEKTI >gi|229269856|gb|GG666055.1| GENE 10 8660 - 9022 369 120 aa, chain - ## HITS:1 COG:no KEGG:Clos_2690 NR:ns ## KEGG: Clos_2690 # Name: not_defined # Def: flavocytochrome c # Organism: A.oremlandii # Pathway: Citrate cycle (TCA cycle) [PATH:aoe00020]; Oxidative phosphorylation [PATH:aoe00190]; Butanoate metabolism [PATH:aoe00650]; Metabolic pathways [PATH:aoe01100]; Biosynthesis of secondary metabolites [PATH:aoe01110]; Microbial metabolism in diverse environments [PATH:aoe01120]; Two-component system [PATH:aoe02020] # 1 115 234 347 599 87 40.0 2e-16 MTDNAYNGLEWLKKLGTEFEDKIIQGAGSLYPRTHQAVKPNGTGLIEAYEENLKYKEDYK LLTETTAKKILMDGDKVSGVVCENHDGSELKIKANKAVIISTGGFAKNADMVVEYKDAEK >gi|229269856|gb|GG666055.1| GENE 11 9199 - 9771 860 190 aa, chain - ## HITS:1 COG:CAC2762_2 KEGG:ns NR:ns ## COG: CAC2762_2 COG3976 # Protein_GI_number: 15896018 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 61 144 48 131 132 70 45.0 2e-12 MNNKKRISLALALLLGLSSLTACQKSEEKPAEEKKQEEKSDEADKKEDSKEEEKKEGEKT EGKFEATGPGYGGDIKVAVDLKDGKIENIEILENLESAGVGKVAMPIVAERIKKGQSVNV DTVTGATASSKGLMLAVTNALKEANIADKFKEEYKEDREYPSELDADVVILGGGGAGLAA AVEAVEKDLL >gi|229269856|gb|GG666055.1| GENE 12 10080 - 10649 991 189 aa, chain + ## HITS:1 COG:SA0366 KEGG:ns NR:ns ## COG: SA0366 COG0450 # Protein_GI_number: 15926082 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Staphylococcus aureus N315 # 1 189 1 189 189 243 62.0 1e-64 MALIGKTLPEFKLDAYNPAKEEFVTVTNEDLKGSYTVLIFYPADFTFVCPTELEDMQESY DELKALGAEVYSVSVDTHFVHKAWHDNSEAISKIKYTMIGDSNKELTRELDLLDESGKAH RATLVIDPENVIQTIEINADGIGRKANVNINKVKAAKYVASHPGEACPAKWESEADATLT PGLDLVGKI >gi|229269856|gb|GG666055.1| GENE 13 10651 - 12180 414 509 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 205 505 1 303 306 164 33 2e-39 MLDTNLKNQLAQYFGLLKTEVTIGLSAHDEKSKKVREFVEEVVALSDKVKLVEKDLPYTP SFEIKGAFDHGRIIFAGLPLGHEFASFALAMLQAGGIAPKIDDSDKKRIESLGPADFETI VSLSCHNCPDVVQALNIMAILNPKINHTMIDGGTFQDLAESRDVLAVPAIFKDGEFFEGG KQSLASLLDKLGTKVDKGEFANKGLFDTLIIGGGPAAATAAIYAARKGIKTGLVASEFGG QVNETLSIENIPGFKYTEGPDFMVQMKEQVTSLDVDLMTGVLADGIKAVSDKVEISLDNG AKLFAKTAIIATGARWRLIGIPGETEFRNKGVAYCTHCDGPLFKGKNVAVIGGGNSGIEA AIDLAGIVKHVTVLEFLPELKADEILQKKLKSLDNVKVITNAQTTGLYGEGKVERLEYTD RVSGEENKLDIAGCFIQVGLIPNTDWMGDSGIEKNKMGEIITGNDGATNIERIYAAGDAT NSKFKQIVIAAGSGATAALGAYNYLMVNE >gi|229269856|gb|GG666055.1| GENE 14 12275 - 13624 1709 449 aa, chain + ## HITS:1 COG:SPCC1672.03c KEGG:ns NR:ns ## COG: SPCC1672.03c COG0402 # Protein_GI_number: 19075374 # Func_class: F Nucleotide transport and metabolism; R General function prediction only # Function: Cytosine deaminase and related metal-dependent hydrolases # Organism: Schizosaccharomyces pombe # 54 448 56 444 527 260 37.0 3e-69 MNKSFAIEAKAFYSKSFDQVKFINKGIFLINEDGFIEEIYEKSHAAYDEIRQKLLEDGKL RVLADDEYILPGFIDLHNHAPQWPQAGTALDSPLEVWLGKYTFPLESKYRDLEFANMVYR DLVKETLKFGTTTAMYFSSVDRAPSTLLAQICGTLGQRGLVGKVVMDDPTANPDYCRDKS AKDAIEESRLFIDEVLAIKDTYKQKVYPVITPRFIPSCSDEALEGLGELAKTYKDIHIQS HVSESDWEHGYAIERYGIHDATALDKFGLINERTILAHACHLSEEDMKLLAERGASIAHS PISNAYFANAVLPVKTCQENGLNVGLATDISGGYSPSMYTAIRQAVISSRMLNDGVDPAL ASDKRGRKDSSITLNRAFYLATAGGGKALKLPIGKLEKGYAFDIQILKIDEAIPHFYEEL SDIDVLHKLLLLSESSNIKEVYIQGERVK >gi|229269856|gb|GG666055.1| GENE 15 13625 - 14956 310 443 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 13 438 7 419 447 124 27 2e-27 MENNIQNPNEKKIEERIPTGKALVLALQHTLVMNAYVVPLIIASILLFDDAQKVSIIQST FLVSGITTLIQALVFMKYPLVYGASFVPVGGIIGIYMINGGNIGSWAYVVGACLIGAFVQ VMIGLSKQFNKILQSLISPVVGASIVLNIGLSLIPLALNSQIFVENEASLGENIIIALIT MLAMMVFSILGEKNNKVGSISRIGSGIFALLCGFLVYLSYGYGNFEPVKNASFFARPALP FIDFSIKFDLASVFTMIILYFVIMTETVGSWLATSSTTQTELTEERVNKGVTGLGIANMI SSLFGVSPMTAYSSNVGVLALSKVFSRHIMTFVGAILILIGFSGKLSAIITVIPSAAIGG VFLVTSGIIALAGINMVKNIKLDSKGQYILIISMSFALGLNLIPEDFIKSLPVIIQYILG SSIASSALVAIILNKIIPDGKIS >gi|229269856|gb|GG666055.1| GENE 16 15065 - 15829 600 254 aa, chain + ## HITS:1 COG:BS_mta KEGG:ns NR:ns ## COG: BS_mta COG0789 # Protein_GI_number: 16080713 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 1 112 1 109 257 70 37.0 2e-12 MKYLSVSEFANMFNVSRQTLIYYDKIDLFKPCEVDPKTGYRKYTYNQFSQFSFIKFLRSL GFSIEKIKDLLSHDNLNTLKEELNFQADMILKEQERLSEIIQTIDRKLDFVDEKLKISKN IDYDFISSPPRIYYSLGYEENIYNSSLFFNYPTLVFYNYKKEIRSYDKVFGALVGFNYVK EEYEDFIKYLDKYQALRFFYEGPYADIPRVVEEAKKKFPDKNFSKDFICINILDPFLENM VDRYLTEIHIPICS >gi|229269856|gb|GG666055.1| GENE 17 16132 - 17583 1862 483 aa, chain + ## HITS:1 COG:CAC2701_3 KEGG:ns NR:ns ## COG: CAC2701_3 COG0516 # Protein_GI_number: 15895958 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Clostridium acetobutylicum # 205 481 1 277 280 388 67.0 1e-107 MKIIGDGLTFDDLLLVPGPSEVLPNQVEIKTNLTKKIKLNIPLMSASMDTVTEYEMAIAM ARQGGIGIIHKNMSIEEQAAQVDRVKRSEHGVITDPFYLHPYNNLGDALDIMAHYRISGV PIVDDDMCLKGILTNRDVRFQDDESVLIDDIMTKDNLILGKEGISMEDAIKKMESGKVEK LPIVNDEGKLKGLITIKDIEKTRQYPNSARDDQDRLLVGAGVGITTDMMERVDALVGAKV DVIALDTAHGHSKGVIEAVKKIKAKYPDLQVIAGNIATGEAARDLIEAGVNCVKVGIGPG SICTTRVVTGVGVPQISAIVDCVEVAKEYGIPVIADGGIKYSGDITKALACGANVVMAGS LFAGTEESPGETIMFEGKQFKEYRGMGSLASMKSGSSDRYFQNDTKKYVPEGVEGRVAFK GYVGDVIYQLLGGLRSGMGYVGAANLKELYEKSKFVRISPASLVENHPHDIQITRESPNY TKK >gi|229269856|gb|GG666055.1| GENE 18 18098 - 18778 945 226 aa, chain + ## HITS:1 COG:no KEGG:Apre_0499 NR:ns ## KEGG: Apre_0499 # Name: not_defined # Def: YodA domain-containing protein # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 1 226 1 234 234 226 58.0 4e-58 MKFNKKYTITALLSLGLILAACQKDAADTKTKEDTKAETKVEEQAKDEKPAEDEKPAEEA DKASIADWEGEWNNMGGYLEKPEIQGAFKTLAEKENTDEKSAKEGYLKKRKCDFGGLEIS GDHVKFLKEFPDAKGEVIGEADYTYKDKIEVEHGGHKLEWDVFEATSKDAPYKVLLMMPI HGEESLTHFHMRYGDDKDSLLKEEGWYPTFVKPSSTDQQIIDEITE >gi|229269856|gb|GG666055.1| GENE 19 18990 - 19706 750 238 aa, chain + ## HITS:1 COG:no KEGG:Apre_0500 NR:ns ## KEGG: Apre_0500 # Name: not_defined # Def: periplasmic solute binding protein # Organism: A.prevotii # Pathway: ABC transporters [PATH:apr02010] # 1 238 57 294 442 362 76.0 5e-99 MPLDKDPHIWEPSPKDMKKLASCDLLVVNGANMEPWLDTVKENLPNLDILKLSDSVDLIT YKGAAAIGDFQYLARIDIEAGKNKIDFGHTHEDMMRVAFIKDEGLEQKDLVKKAKDIMSQ KGELVHQKSTNKVEEGKVYGVEMGHESGEVYFDFPDKGKWIFISDRISEDLLPYSFVDGK GNFLKDEGKEVSLMEGSSSGFDKITYDPHSWISIVNAKKYLNAIQEKLIEKYPKNERI >gi|229269856|gb|GG666055.1| GENE 20 19735 - 20139 289 134 aa, chain + ## HITS:1 COG:TP0034 KEGG:ns NR:ns ## COG: TP0034 COG0803 # Protein_GI_number: 15639028 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Treponema pallidum # 7 128 193 307 316 86 35.0 2e-17 MTDIDAEYKEKFAKLDKTRKNFLTIHYAYAYLARDFDLTQYPLQGLTSLESPSLKTIKKA IDFSEFNHISTVFYEYGQNPKQAKALAEEIGGKISPLASMEYLSKEQKDKNQSYIDLMRM NLENLYKSMVEEEK >gi|229269856|gb|GG666055.1| GENE 21 20136 - 20807 320 223 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020817|ref|YP_526644.1| ribosomal protein S16 [Saccharophagus degradans 2-40] # 3 222 11 228 318 127 36 1e-28 MKAIEIKDVTFAYNKIPVIKSCDFELEMGDLALILGGNGSGKSTLIKLMLGELKKDTGSI KILGKNIEDYKSYKDIGYVPQINIVNKISFPITCLELVSLNLYEDFGFIKIPKKAHYQKA RDILTKMGMEEYINTPVNELSGGLAQRAMIAKAMINNPQILILDEPTAGVDKQSKANFFE TIDILSEKFSITIVMVTHELKEMESLDLNMQKYEMVEGRLIRC >gi|229269856|gb|GG666055.1| GENE 22 20801 - 21595 996 264 aa, chain + ## HITS:1 COG:CAC2878 KEGG:ns NR:ns ## COG: CAC2878 COG1108 # Protein_GI_number: 15896132 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Clostridium acetobutylicum # 1 252 4 255 268 137 32.0 3e-32 MLEFAFMRKALFLGFLLSIMIPIIGIVMVNRKTSMIGDALSHTALAGVGMGLILGFDPLV GSAIICVLAAFLIELIRKKFPQYGDMATAVIMSTGLGIAAILSDFAPGGNSFESYLFGSI SSVTTTDIINTSVVFILVIVLSVTRYSALLAIAIDPNTARLSGVKVEALDAIFTLLAAIT IALSVKIIGALMVTSLIVLPVATSLIVAKSYKQTFFITTILGVIYMMVGIIISYHFDIKP GGSIVVNAIIGMAAFALYKKFIKK >gi|229269856|gb|GG666055.1| GENE 23 21733 - 22497 207 254 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 250 1 243 245 84 27 2e-15 MLEIKNISKTFNLGTDEEVTIFDKFSLKIEEGVATTIIGPNGCGKSTLMNIISGALRVDG GSILIDGEDVTKLSEEKRAAYIGKVNQDPKDGVATNLDIYENMALALKKGKRFTLKNLKK NADEKEIIERLKSLNLGLENKLHTKTGLLSGGQRQSLSLLMATAKRPKLLLLDEHTAALD PKTSRNIMDKTRSLIDTEKITTLLISHNLRDVVRYSDRIIMLNKGKIAIDVMAKDITEPE LIRKYKEELGEYEG >gi|229269856|gb|GG666055.1| GENE 24 22484 - 23359 1159 291 aa, chain - ## HITS:1 COG:FN2080 KEGG:ns NR:ns ## COG: FN2080 COG4120 # Protein_GI_number: 19705370 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Fusobacterium nucleatum # 7 271 1 266 278 197 40.0 2e-50 MTVLLNIMASSVEIGLVFGVLAMGYMLTYKILEYYDLTLEGSYPLGAFLTAAAITSGLNP YLGLILSVIGGVAAGSITYFLYKKVRVEPLLTGILTLTMLYSVNLKIKGVSNIPVAQYPS IFGSVPKWIILIAFVLIIKVLIDYFLRSEQGYLLKVTGNNRKLVKALGKDPDTYVFWGLI ISNALIGLAGGLMTNYQGFADIGMGTAMIVTGLASIIIGDTIAKNSNKLRDTTRAILGAI VYRIISGIAIYFGLNPNDLKLITALIVIAFIAYNNYLGKKQYRKLVRDVRN >gi|229269856|gb|GG666055.1| GENE 25 23360 - 24346 1215 328 aa, chain - ## HITS:1 COG:PA3836 KEGG:ns NR:ns ## COG: PA3836 COG2984 # Protein_GI_number: 15599031 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, periplasmic component # Organism: Pseudomonas aeruginosa # 25 319 25 320 325 156 36.0 5e-38 MKKIFTKMVGTIFVLVGLIILGSCGNKEGKKEYIIGVIQIADHPSLDAAREGFLEKLDKE GISYKLIDHRAGGDISLIPQLASDLKIKGADLIYTIGTPAAQGVYNIVNDRPILFTAVTD PIGAGLVDEKTRTGKNITGVSDYVDPAKVIDDFLKVYPETKTFATMYNTNEQNSLVQIEA LERAIKERGLSLKKQGVSSINDIPQALASLKSGTDAMVTVTDNVVVNAMPVIAKTLKDEK IPSLAFDEGSVENGALIAEGVNYKKIGQRAGEMAGEILEANKDIKELPFEDAKDLEMLVN KDTAKDLGLDLKNEGLKDAKIMEKKEGK >gi|229269856|gb|GG666055.1| GENE 26 24767 - 26842 2765 691 aa, chain - ## HITS:1 COG:SP2101 KEGG:ns NR:ns ## COG: SP2101 COG2217 # Protein_GI_number: 15901916 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 1 687 1 683 687 452 36.0 1e-127 MRASLAHRLDTRARFVYEEDLSFDLANNLKYLVQGQDGVKFCKVNPLANSFTVTFEKGSL PNLARFILDLDLKTIKDLVIDDSDFYPQEEEDVFRILRNAFYRRIFFRYFIPAPLSPYFI MLRAYPFIRDGLKAIRQRKLNVDLLDATAISVSLATGEFGDAANIMFLLDLGEKLEEYTL KKSQDDLAHSLALNVDKVFVVEDGKKILKPLKEVEVGDLVSVEMGSTIPVDGEVVEGLAM VNEASFTGESEAVKKNKGSVVFAGTALEEGGILVKVNKKYDDSRLSHIINLISESERNKS LSQKKAENMADSLVKYSFIGAGLTYLLTRNFIKAKSFLMVDFSCALKLTIPIATMKAISQ ASDMDVIVKGGRFLENLSQADTIVFDKTGTLTKSEPRLAKVIALTDISEDECLRIAACLE EHFPHSIANAVVKAAKDKDLHHEEMHSKPEYIVAHGIRSYIVDKPALIGSEHFILEDEGI EISDETREMIDQLKEHYSLLYLAFADRLIAVLCIEDPIREEAESVITDLRKLGFKEIAML TGDAENAAASVANRLGLDHYQSQVLPEDKEAYIRKKKAEGRKVIMIGDGINDSVALSAAD VGIAMHQGADIAKEISDISIGTDSLEGLIEVIKLAKSMDRRIKADYRKIVGINSGLIILG VLGILSNTNSSLIHNMSTVAIAGQNMNNYRL >gi|229269856|gb|GG666055.1| GENE 27 26842 - 27174 704 110 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485817|ref|ZP_03916133.1| ## NR: gi|227485817|ref|ZP_03916133.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 110 1 110 110 113 100.0 5e-24 MLNKKILRIGAGVLVGALGGKILSSELAKKAAVGAVAGGLRVKESIDKTVEQVRVSADDI VAEAKEANAKEDLERAKKAAELNLDEVAKEDLINQIKEEVKAELKEDEDK >gi|229269856|gb|GG666055.1| GENE 28 27649 - 27975 217 108 aa, chain + ## HITS:1 COG:no KEGG:Apar_0213 NR:ns ## KEGG: Apar_0213 # Name: not_defined # Def: putative protein-S-isoprenylcysteine methyltransferase-like protein # Organism: A.parvulum # Pathway: not_defined # 6 108 64 166 166 115 54.0 8e-25 MIFFSLYIWVRAVLIQKIHANVKADILITDGVYGTVRNPVYTAFIFIFTGILLFAKNYFL LTLPIISWVFLTILMKASEEKYLKAKFGKEYDLYCRRVNRVIPWFLKK >gi|229269856|gb|GG666055.1| GENE 29 28056 - 29075 1074 339 aa, chain - ## HITS:1 COG:SP2150 KEGG:ns NR:ns ## COG: SP2150 COG0078 # Protein_GI_number: 15901962 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 8 336 9 330 338 268 41.0 1e-71 MDIDLRKRNFIALKDFSEREILYLIDLAAEFKELKVQRKLHKYLEGQNIILLFEEASART RTSFEIAAADLGMTTSFINYTQAKMGENESIEDTFSVFDRYYDGIVYRGHEQNLLEKLVK ITEVPIYNAMTDMFHPSQMISDMLTIREKFGYLRGLKLAYLGYPGDIMPNSLVITCSKLG IDFVGCGPRKFFPRRDLVRLSRKFSDKHDSDVIYTDDLEEAVADADIIYTDMWISLTEKE NPPMDRIRRLYPYRVTDEVMAMCDKDAIFMHCLPAFHDKKSNLSQKVLAKLPEDMKDWDF NGMEVADSVFRSERSMVFDQTENRIPAVKAILYSTLRYD >gi|229269856|gb|GG666055.1| GENE 30 29077 - 30066 1095 329 aa, chain - ## HITS:1 COG:no KEGG:Apre_0032 NR:ns ## KEGG: Apre_0032 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 329 1 323 323 335 56.0 2e-90 MGIRFRKSINLGKGFRINMSKSGPGFSWGGKGFRITKKASGGFRTTAFLPGTGLSYQKDF SNPFGGGVKKKSSPKNEIFSNDDSKIESRDFGLDFKNLESTGLKDVIDEAGYKYPLRSMG LLVFILGIVLTFIRPFLVIVAIIGALMYFYKKKSSVEIEYDFEGDSGKEYDLTNKLLRGI LESDKVWLVDKIEADDDKNLITARKELRLREGLAGDLSTNVKVYSLEAGDLTLSFLPDAL LINKNGANKAIDYKDMEVDLRSEVFLEEELISDATLINKTYLHVNKDGTADKRYKDNPLI NHVEYGVLEMKNKDMTLVIVFSDTVIDGE >gi|229269856|gb|GG666055.1| GENE 31 30191 - 30478 371 95 aa, chain + ## HITS:1 COG:no KEGG:Apre_0024 NR:ns ## KEGG: Apre_0024 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 16 90 3 76 87 69 49.0 5e-11 MILEVKKIKVLYKGCKLMNKLRRLILRYFRALTNKDTPMLAKLLAALSLIYIALPADVIP DIFPFLGYVDDTVLTAGLIYFSNKLIPEEVKKLEV >gi|229269856|gb|GG666055.1| GENE 32 30666 - 32711 1518 681 aa, chain - ## HITS:1 COG:no KEGG:GYMC10_4315 NR:ns ## KEGG: GYMC10_4315 # Name: not_defined # Def: ADP-ribosylation/crystallin J1 # Organism: Geobacillus_Y412MC10 # Pathway: not_defined # 2 665 4 684 706 401 35.0 1e-110 MENYKERIYAGLLGKAIGVRLGAPLETENWTKERIKESFGELNNYIKDSKRFAADDDTNG PIFFARALYDYGKPLTYEKISQTWLNYTRDGQGMFWWGGVGISSEDTAYKNLKKGILAPL SGSSNQNGKAISEQVGGQIFIDSWGLINLGDIDKAMKDAKIAASISHDGDGLIGAQFISA CIAGAVYYDSTVKLVYDILKKLDQTSQYVKDMWKVYEFYLNNTSDYRLGIEYVYENFPNE NYEGICHIIPNACIVLLGLLYSENDFSKAIEITVMSGLDTDSNAGVVGTIMGVMNGLDGI DWKYREDINDLIICSSFSPDLNITNIVDFTNFLWAIRTNCKYNPNILTFDFKGSSNGLII GNDFRILRDLVSKNSENCYDVLVDNLVANDEASIYLKTNYLPKDFPDSRYDPIVMPHAYP GDRYSFEVSVEYLHSKSLLVNSFIELINGEIIKCSCEYELEDGEINIIDFTIPNTNSIDI NKVGLMLTTRVSSKDGAGILARFKINKIRKKLNTNTVIKFKNQNSYFLNNVTPFSNNNIS TKLLGDSLLIKAKDSYGIAISGSYYSENQVVKTRISNVEGDIFRIAFKVIGLADFYSFDI YKDKIKTYKNKFNTSILLDELEFDRRECFDIELRVTKDEAFLRIDNYNILSVNGIENEYG HFGFGGKNISAVIGDIHVEYS >gi|229269856|gb|GG666055.1| GENE 33 32698 - 33639 730 313 aa, chain - ## HITS:1 COG:STM0661 KEGG:ns NR:ns ## COG: STM0661 COG1957 # Protein_GI_number: 16764038 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Salmonella typhimurium LT2 # 7 294 5 299 311 181 36.0 2e-45 MTRDRELIIDCDPGQDDAIAISVCKNIDRLKINGIVTVAGNNDIDNITNNARLLMQTLKS DIKIFKGSKGSLLNKVYSQDVHGTTGMDGMSQIPEINYQVEKGNFIDFYKETLKSKKITI VAIGPLTNIALLIKTYPEYIKNIEEIVIMGGGLQKGNVTDYAEFNFYADPEAAKIVFDSG IKITLFSLDVTEDAYLLEREYEQLKKGNYLAKAMFELINYYHSNGKKFGYTKCSLHDVCT ILYLADLNIFEMEDRYIDISLHGLTRGMTLSNKSKEEKAIYNARVGKTIDRVKFKNAIIN NILELDSKLYGKL >gi|229269856|gb|GG666055.1| GENE 34 33636 - 34562 731 308 aa, chain - ## HITS:1 COG:BMEII0087 KEGG:ns NR:ns ## COG: BMEII0087 COG1079 # Protein_GI_number: 17988431 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, permease component # Organism: Brucella melitensis # 3 293 4 284 303 174 37.0 2e-43 MNLLNQILNTAFLYSAIRVTIPILLPAIAAYVTNKAGVPNIGLEGIMLTASFFAVIGSAF TSSIIMGVIIAVISGVVMASILAFFTLKLKTDVILGGIALNLFSSNLTVFLLYLITGDKG TSASLASKVVPNVQIPIIKDIPFLGEVISNQNALVYFSILLVIIVYIILNKTKLGRHIMA VGENEEAARSVGIKVNKIRFIAFIISGILCGIAGAFLSMGYVSWFSRDMTAGRGWIALAA EAMGMGSMVGTTLSSILFGVSSALSNIAQFFGIPTELVSIIPNVITVVALLLYSIKLYNN KKVKVSNT >gi|229269856|gb|GG666055.1| GENE 35 34537 - 35607 817 356 aa, chain - ## HITS:1 COG:BMEII0086 KEGG:ns NR:ns ## COG: BMEII0086 COG4603 # Protein_GI_number: 17988430 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Brucella melitensis # 13 326 14 327 359 185 34.0 1e-46 MKKVLKKYEMVRTMMAISIALLVGFSIILLLSQNPVSAINNFIIGPITKKRYIGNVVTTA IPLIFSGLAMSLLFASSQFNMGAEGVFYFSGLIAAIIGIVIKLPVVVHAGLAITVAGIIG ALVIGLIGLMKAKYGTSELVVSLMFNSILYGIGLYILNYYFRESNTVVLKSFAINKSALL HKILPGTSIHSGLILALLAIFVCHFIMEKSKLGYEINLIGTNPEFAKYSGINIKKVIVSV SLIAGLLSGIGGGVEILGIYDSFKWTALPGLGFDGALIAMLAKNKPKNVLPAALFLSYIR IGADLMSRLTDIPAEMVGIMQGIIILLISGRRFLQNYKNKLILEEVNKNELTKSNS >gi|229269856|gb|GG666055.1| GENE 36 35618 - 37138 1181 506 aa, chain - ## HITS:1 COG:TM0103 KEGG:ns NR:ns ## COG: TM0103 COG3845 # Protein_GI_number: 15642878 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport systems, ATPase components # Organism: Thermotoga maritima # 18 505 16 503 507 370 40.0 1e-102 MEKEILKLSNISKIYENGIIANKDINLSVNKGEIHALVGENGAGKSTLMKIIFGMEKPTG GEFLLKNEPVNFSNVEEAIQKGIGMVHQHFMLINSLDIIDNVMLGVEKTKGLFLDKHACT KIVKEIADKYNFRLDYNKKVSDISIGMKQKVEIIKALVRGAEIIILDEPTAVLTPQETEE LFIQIKTLAKSGHTIIFISHKLNEVKEISDKITIIRKGESKGTYLTKDIDVSQIADLMVG KKLNNEMPVRNESSENKIVEVNKVNLSHENKKSLNNINFSINAREILGVIGVEGNGQAEL VNLLTLKDRSYSGDIKVLGKDLKSYVYDNYRKDALAYIPEDRMNVGISESLSVADNLLST RYREKIYSNRFFLKKDAINSYSKEIIDDYEIIVNGPDQVVGYLSGGNIQKVVVGRECYEK PKFLLCEQPTRGVDLGAAKIIHNKLIELRNQGTAILLVSADINEVLKISDRALVMYNGEI VARIDDMENIDISEIGEYMLGLKVQA >gi|229269856|gb|GG666055.1| GENE 37 37196 - 38308 1325 370 aa, chain - ## HITS:1 COG:CAC0702 KEGG:ns NR:ns ## COG: CAC0702 COG1744 # Protein_GI_number: 15893990 # Func_class: R General function prediction only # Function: Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein # Organism: Clostridium acetobutylicum # 5 349 4 341 357 154 33.0 4e-37 MKNFKKILTLVMTLVMAVAFSSCGNKIESETSSKKEGESYKVILLIPGNLGDKSFFDAAN KGMEEVAQLEGVTTKVVEMSPDEKKWEPAFLDAIDEGYDLIISGNAASDIMNKLAEENPD SRFLNFDNSGTEAPSNVYSVTYATNEGSFLAGAFAAMVTSNKEMKNTNDEKLIGFLGGMD IPGINDFLVGYIQGAQYIDKDIKVATSYAGTFTDPAKGKELGIGMYNMGVDIAFNVAGQT GLGLIDAAYESNKYAIGVDSDQSKLYGETEPEKAKLVLTSVVKQIDTTILEGVKKAREGK LEFGKHELLGLSANAVALADNDIYQTVPAEIREKMSALAKDIIDGKIKVKSGFEMSTDEI SKYRDSVSNN >gi|229269856|gb|GG666055.1| GENE 38 38349 - 39185 508 278 aa, chain - ## HITS:1 COG:SA0258 KEGG:ns NR:ns ## COG: SA0258 COG0524 # Protein_GI_number: 15925971 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Staphylococcus aureus N315 # 3 273 21 301 304 116 32.0 4e-26 MYKIVKEGETIASNKFEKFIGGKGLNQAIALKKAGADVIFAGQVGNEDGDLLIDYIEENN LTHRIKKISGSSGHAIIQIDSCGQNSIIVYGGANKKIEKSYVNEVLKGFNKGDYILLQNE INDVDYIVNVASDKGLKVFLNPSPINEKIYDIDFNKVACLILNETEGESLSGMDNKSDII SYFKETYPAMEVILTLGEEGGYYCNGETLVKYKANQVDVVDTTAAGDTFCGYFLGLQAQD YSLEDSLEIASLAAAITCKSKGASSSIPTISEIIKNKQ >gi|229269856|gb|GG666055.1| GENE 39 39296 - 40282 923 328 aa, chain - ## HITS:1 COG:CAC0360 KEGG:ns NR:ns ## COG: CAC0360 COG1609 # Protein_GI_number: 15893651 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 1 326 1 325 328 172 34.0 9e-43 MSTIKDVANLANVSTTTVSMVLNNTNDKISTETRKRVIEAATKLNYRANYIARSLVSGKT NVIMLIIPDISNPFYGLLAKQLSRYMRLKGYFLYIFNSNNENLDEELFQNLIEDNFVEAT FVVDRRVKVFSKKILNNNKIVFLDEFDYENKDTYTVTGDNIKGGYLAVKYLIQRGLRKIA LALGPRDSVVSNRRLSGALACAKDYKIKIKEENIFCADFTFEGGVRAGEYFINKDIDSIF CFNDMCAYGIMDYFNTEKIKIPNNLSLIGYDNLYINNLLGTKLTSVDQNLSKIAEEAVFM IDKLIKNDNIANKNIFIEPKLVIRESII >gi|229269856|gb|GG666055.1| GENE 40 40519 - 40659 140 46 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485831|ref|ZP_03916147.1| ## NR: gi|227485831|ref|ZP_03916147.1| hypothetical protein HMPREF0072_1234 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1234 [Anaerococcus lactolyticus ATCC 51172] # 1 46 1 46 46 84 100.0 4e-15 MPANVIPDIFPFLGYVDDTVLTAALIYFSNKLIPEEIKKETRSIEG >gi|229269856|gb|GG666055.1| GENE 41 40721 - 42544 2380 607 aa, chain - ## HITS:1 COG:CAC0158 KEGG:ns NR:ns ## COG: CAC0158 COG0449 # Protein_GI_number: 15893453 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Clostridium acetobutylicum # 1 607 1 608 608 617 50.0 1e-176 MCGIVCYSGKLDAREVIVDGLEKLEYRGYDSAGLAVIDEGKISVVKKAGKLANLKKALEE NPIDGSIGIGHIRWATHGEASDINSHPHLSNNGKIAVVHNGIIENYRELKKELEEEGYTF SSTTDTEVIAVLLEKYYDGDLLEAVKKVKDRLEGSFACGIISADEPDRLIGMRVESPLVV GLMEEGIIMASDIPSLLKYTKDVIYLENGDIIDIKEGSYTIYDKNNKEIQREIKKISWSV DAATKAGYDHFMIKEINEQAAVVKELLNLNIKNDKVDFEGDSFSKVEIESFQRIYIVACG TAYHAGLVGKVAIEKLAKIPVICDLASEFRYNDPFLDERTLVIFISQSGETADSLKALRL AKEKGAKTLLITNTLASSMDREADKSIYCYAGPEIAVASTKAYTSQILNLYLLALDFARK LVRISKDDYDKIIENLKEIPEKIDQILAKDEIIKDFAREIKDQQSLFYIGRGLDYATSIE AALKLKEVSYIHTEAFAAGELKHGTISLIEEKTPVIAIMTQKNLTGKSLSNVEEVVARGA NVFIITSHKDARMEKITEKICEVPETLDILYPLLTVIPAQLMAYYTSTAKGIDVDKPRNL AKSVTVE >gi|229269856|gb|GG666055.1| GENE 42 43421 - 43681 194 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKIRNLIQSNSLYTKKLAERQASLSALRTRSRSGVLVSTSRRAIPGFKGRRVMDNLPSGR ERRKVPWASPLNGAATLMAKKYTRYS >gi|229269856|gb|GG666055.1| GENE 43 43774 - 43962 194 62 aa, chain - ## HITS:1 COG:no KEGG:Apre_0020 NR:ns ## KEGG: Apre_0020 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 48 1 48 62 66 75.0 3e-10 MKRPIDRFKGKTREEIEEKEALLDKDNLEKGDRLAMFLAAMRVFMPFVLLILAPIFLIAY FM >gi|229269856|gb|GG666055.1| GENE 44 43959 - 45575 1850 538 aa, chain - ## HITS:1 COG:CAC0180 KEGG:ns NR:ns ## COG: CAC0180 COG4608 # Protein_GI_number: 15893473 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, ATPase component # Organism: Clostridium acetobutylicum # 260 505 77 319 321 297 58.0 4e-80 MENKDKKVLFKIRNLKKYFPLKKKGLFHKGPGEYVHANESISIDIYEGETLGLVGESGCG KSTFGRTLLQIYEQTEGTTLYYGKTLEELAPEYMGNMISKIPSKFPNYHKELEELNKIYE DLEKSETDEARAMNNEKAMFKRREIEEEYLNMIRIAGGLLASDDLNKVSKILSDEYQILK ERAKVYIEIEEFEQKAQMMVRTWDEYYKILDEDPKYKELKEKADAITKRVEEKRAEIEAY RDTLRDKEKFNELEKELDPGIDLSELNKEEMRELRKDLQMIFQDPYGSLDTKMTVGNIIG EGVLGHNLFKSRNEKGYNEYIQETMGKCGLAPYFLHRYPHQFSGGQRQRIGIARALALKP SFIVCDEAVSALDVSIQSQIINLLQDLKEQNNLTYLFITHDLSVVKYISDRIGVMYLGVM VELTDSEKIFANPLHPYTKALLSAIPRTDVDQGQELAVIEGDIPSAVRPPKGCRFHTRCE YAMDICKNFEPELKDVGDGHYVACHLMDVSEEEKEKAHAANLARRAKEAEELEEISAI >gi|229269856|gb|GG666055.1| GENE 45 45565 - 46563 576 332 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 3 320 11 324 329 226 38 3e-58 MSLLEINNLHTYFSTRRGLIKAVNDVTLSVDEGKTLGLVGESGSGKSQTAMSILQLFESN QKIYGGEIIFEGEKISDYNTSQMEHIRGNKISMIFQEPMSSLNPVFTVEKQLSEVLMLHK KMNKKEAAERVKELLAAVKIPNPHVVTKQYPFELSGGMNQRVMIAMALACEPKLLIADEP TTALDVTIQAQILRLMNDLKHKAGTSILFITHDLGVINQMADEVAVMYCGQIVEQSPVEF IFKRDITDFNHPYTVALLNSIPSITSDRNERLDIIPGSVPHPLNLPEGCKFADRCKFATE RCIKEMPELKAVNENQLIRCHYPNRKEREDGK >gi|229269856|gb|GG666055.1| GENE 46 46572 - 48524 2210 650 aa, chain - ## HITS:1 COG:alr1556 KEGG:ns NR:ns ## COG: alr1556 COG1173 # Protein_GI_number: 17229048 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Nostoc sp. PCC 7120 # 422 650 144 372 372 220 43.0 9e-57 MNRKINKPFKSYLSFLKTYFLRGFTFATGMEDDIPTPNNEKEPNTDVHANSQGGPDKEPE NDKLKEEAIMSPGKVAIRNYFRNPLGVIGLAMFIAIVLVIFVGSKLLPFNQYYSQGNLTN VAPGAGYMNYPSAMEKEGVEKISIGNTFAVGLTKEGNIYYWGSDNEDKVLSMPEGVKNNL EGKKIIDVAAGDRHILVATDDNNVYGWGNKTFDQTKVPGMQAAQIKKEGIAKIGGGTQYS VVLTKANNIVIWGSTLASRLDMIPSKIQGQIVDFDCNTINVIVVKKDGSVDLLGVRGAEN DTAMPAELREGKVKAKKAVLTANSAAALTEDGKLYVWGPSRDKLSGDFVPKFDAKIVDIE AGDSVLSALDENGKLYQWGVDNYGETKTPEGEFSQIFENYFNNYAVDKEGKIKTWGLNGF RFGSDDQGRDIFTRLIHGGKMTMIISLISSIIQIGLGVLIGMVSGFVGGRVDNILMRISE IVASFPFYPMLISLSALLPPGASQEQRITMVMILLGVLGWTGLARLVRGQILAERERDYI TAAKALGVKDWSIMVKHILPNVLSIVIVNATIGYAGNLLTESGLSFLGFGVQEPTPSWGN MLTAAQSSDVLNTYWWRWVFPALAVFLTSFSVNLIGDALRDAIDPRANER >gi|229269856|gb|GG666055.1| GENE 47 48526 - 49488 881 320 aa, chain - ## HITS:1 COG:CAC0177 KEGG:ns NR:ns ## COG: CAC0177 COG0601 # Protein_GI_number: 15893470 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Clostridium acetobutylicum # 1 319 1 321 322 252 43.0 6e-67 MLRYIVKRILNLIPVALIISIMLFAFSKAMPGDPIQAMIPTTGRMTKAQKEEMYKNLQAR YGYDKPLPEQYVRWLGRTLKGDFGESTRVRRPVKEYLSEPLKNTIYLNIGSTVISFVLSV LIGIRSATHKGGIFDKTAQTLTLVGLSVPTFFIGLILIFFFAFRLKMFPANGMPRVNAFA EWLKYLTLPTLTLTVGSLASLSRYVRNSMLDALDQDYIRTARSKGLKEKTVVYSHAFRNA LIPVVTALTWAVLGMFSGSAITERIFSYRGIGNELITAVMAQDYNIILALSMFYAILTLL GNLLMDIAYALVDPRVKLEA >gi|229269856|gb|GG666055.1| GENE 48 50054 - 52249 3494 731 aa, chain - ## HITS:1 COG:SA0850 KEGG:ns NR:ns ## COG: SA0850 COG0747 # Protein_GI_number: 15926580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Staphylococcus aureus N315 # 385 724 247 567 571 68 23.0 6e-11 MKMKRVFSSLMALGLAATLVACGGDKAKDAEEKKDDKAAEAPADNKEAPADGEEAKDDKA ELDSFDKQTADDTLVIGAVQEFNGDFLQGWTNNSMDVKARRFLGIEGNNGYGTVVQDEGG QWVNNAAVLKEDPQVVKNADGSETTTYKIKEDLKWSDGKPVTADDYLFGSLLHTYPSYQL VTGSTSIGDDPLMGYEAYKSGKKDTFDGLKKIDDYTFSVTVDASFLPYYEEAALKAFGPY PMHAVSDNLAVSKEGNKIVAKEGYKPTEEDKKKYIENIDNQIAKSKEDFEENNPAPKADA KEDEKKAYEEAKKAHDEDIAKLEKRKEGDIDPTSMLIEDAMIKEYNEYRIKPTVTCGPYK FDSFGNNMIKMSINENYAGNFRGEKPSIPHVILQYVNKKIAIDLLENGDIDIWEAEGEGP LIDQMRAAADEGKIGGYNTFERNGYGNVTFLTDRGATKYKEVRQAIAHLMDRNNFVQSFA GGYGVVTNGMYGTSQWMYKERGADLEANPKFKKYQLNLDEANKLLDATPYTFEKDGKTPW DKKKADEEFAKNPDGFEYYRYDKDGKKLQVNQYGSDESPITTLISNQVPVNAKQVGMEYN VTAGPFATLLDYYTNPKEDAEYTAFNMGTGFGTPFDPWYQYNSKGSDNKTRTNDPKADEI TVKLRQTDPKDKEGYLNNWEEFEMWYNDYLPEIPLYSNQYHTGYTKRVKGFDINTPVWES EYQINAMSLEK >gi|229269856|gb|GG666055.1| GENE 49 52598 - 54799 3030 733 aa, chain - ## HITS:1 COG:SA0850 KEGG:ns NR:ns ## COG: SA0850 COG0747 # Protein_GI_number: 15926580 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Staphylococcus aureus N315 # 356 715 219 556 571 75 25.0 5e-13 MKMKRIFSSMMALGLAATLVACGGDEAKKDDAADKKEDQAADKADDKKEDSKEGQELSDD DKKALDSFEKQTADDTLVIGTSEMSGDFYPGWSNNSYDVKVRKLIGIYGNNSYDTLVQDE AGQWQYNSACLDKEPETVKNADGSETTTFTLKKDLKWSDGSPVTSDNYLFSALFHSYPSY QLVTGSTNIGSNSLKGYEAYKNGDKDVFEGLQKVDDQTFKVTVDASFLPYFEEEYLKVIS PFPTQAISENLAVAPEGNKIIAKDGYKPTDAEKQEYVKNIDAQIAKSKEDFDENNPAPKE DAKDEEKKAYEEAKKAQEAKVAELEGRKKGDVDATSMLIEEAMQKEFNEYRTAPKISAGP YKFDSFENNMAKLSLNEYYQGNFKGDKATIPHVIVQTVNSKIAINLLENGDIDIWDSEAE GALIDQMRAAADEGKIGGYNTFERNGYGNVTFITDRGATKYKEVRQAIAHLMDRNSFVQS FAGGYGVVTNGMYGTSQWMYKERGADLEASPEFNKYTLNLEEANKLLDATPYKFEKDGKT PWDKKKADEEYSKNPDGFDYYRYDEKGKKLQVNQYGSDESPITTLISNQVPANAKQVGME YNVTAGSFATLLDLYYYPKDDAEYTAFNMGLGFESPYDPWYQYSSKGPDNHTKTNDPKAD EITEKLRRTDPKNKEGYLDAWEEFQKWYNDYLPEIPLYSNQYHTGYSKRVKGFDVNTPVW ESHDQINAIRIEK >gi|229269856|gb|GG666055.1| GENE 50 55268 - 56200 236 310 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631297|ref|ZP_00156835.1| COG0697: Permeases of the drug/metabolite transporter (DMT) superfamily [Haemophilus influenzae R2866] # 17 293 5 279 290 95 25 7e-19 MEKKNINNGFLGKIMLLIVAILWGSSLTVVKLASDTFRPNMILAIRFTVSAIILSIIFWK KLKAMTKHDIKNGLLIGVFLFMAYSIQTIGVGYTDPGRSAFLSASYCVIVPFLAWFALSK KPDRFNIIAAVFTIAGIYFVSMAGGKGGSVFDQGREAIIGDGLALLAGLLFAAHIVAVTK LSEGKDPILMTILQFTMAAILSIIVTLVFEDNSAMVLSKKAIFGVGYLAIMCTTVALLLQ NIGQKYASASSAAIILATESIFGIIIPVFMGIESLTTNKLIGFALIFIAIIVSETKLSFL GFQSSKEGIA >gi|229269856|gb|GG666055.1| GENE 51 56373 - 58253 2147 626 aa, chain - ## HITS:1 COG:L82453 KEGG:ns NR:ns ## COG: L82453 COG0791 # Protein_GI_number: 15672466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 474 621 4 145 259 95 40.0 3e-19 MKKINKTVLLASTLFITSAINLADNAYANEDVFVKESVDKISEDNEGLVDKTQEIESKSY NNLDFNEVKPSADSTFSSLEKTDKDATKALDEAKDKSKDGQVDPKAIPTVETGTPAEKRI PGIIYYDNRDLDEALKEEKSLSSEVKDLHSEQSEIEEENYYTGSAGGYFVKKNNRINYYI NNKLVRNANVKVNGRIYRADKFGTITNPRNKWLNIGKDIYYNNKNGNILKGINQIGKFKF CFSQDGILERNKKVLTKDSYYEVDKTGRMKTVANKWVNVNNDIYRVLGNGKVARGVTRIG NNDFMFDNDGKLQTNKKMIVSNKYYEVNASGIVTNPKSKWFALDGQTYWVKEDGTVAKGA VEVNGNTYVFNYNTGAMIAGRPSITNGQYYITDEKGISQIIKDSWVTFEGKTFHTNESGY IQKGLWEINGNLYCFDNGGLLLNSTYTQNGIIYKTDEKGIARIAGYTVVGDKDIDCVMQW MFDAKNKRMTYNMGRGRVTEKSADCSSAVFRSLIYGGFLKSDAYVGNTETLFSMGDKGEV MYEIGPDEIDYGDIFVAGVPGKSLGEGGHTGFILNKNEDTIIHMNYSGNGVSITPRIGNM GDKSGRPVKYFRLVGGKSDRRFVDKK >gi|229269856|gb|GG666055.1| GENE 52 58491 - 59432 1445 313 aa, chain + ## HITS:1 COG:no KEGG:Apre_0012 NR:ns ## KEGG: Apre_0012 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 312 1 316 316 188 40.0 3e-46 MNRKTIILALALGFVITGCKGSDLPESKVSEETIAKALDGKVDLEKEKEQEEKEKEAPKD EKANESNFEITGKNLKKLMVNIGEFDPSLARKLDDDELIDLYKKCEEMSERTGYWDVKDF FFQELAGQYPDKSLKFPLKSIETKYYWKKSTDDSIGDKFKWERNLMVENGADYNQIWSFT DKEVEKAFHEAYDKDPLAYYDDYVKMAQEILTGSTDENENKDEETGAANPEDYKDLIKFG SNERDYEALKEAMVNHYEFKKEVVDKIPNKDIDLAYTRAQKRLEQTGFGDIGLLFDELGK LYPGSSTLYTGKN >gi|229269856|gb|GG666055.1| GENE 53 59550 - 61100 1216 516 aa, chain - ## HITS:1 COG:SP1282 KEGG:ns NR:ns ## COG: SP1282 COG0488 # Protein_GI_number: 15901142 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Streptococcus pneumoniae TIGR4 # 3 515 5 514 519 329 37.0 1e-89 MWHIVLGGYMLQIKNLDITLIKDDRKLLENFNLALNPGDKVGLIGEEGNGKSILLKTIVD RGEVETYAQIRGEIHKKGEIIAYLPQSLDEKFLAMTVHDYMDQVLDPSLIDYNKFYKYLD DFGLDEDLIFGDIKLSDLSGGERVKILLLFELLKDPTLFLFDEPTNDLDYESVKIITDLM KKMEISLIFVSHDPALLREVANRLVHLEQVHRRQVPRHTVFNGGYESYIKERENQIRIQN ARASKEREEFDKKEERYRRVYNSVKYAINTTKNDAEGKNLKDKMASVKSLEKRLQKEKEK LTPRPDFEDAIGIFFDDNIEIPRAKVVLDFKMNELRVGGKNLSKNIEIQVRGPQKICIVG KNGAGKTSLLKKIYKSLKNSDLKIGYMPQDYFEYLEDKETPISYLVKQDSKEEKIRVSNL LGSLNFSREEMERSLKSLSGGQKAKVFFAKMNVEGAEVLILDEPTRNLSPLSQPEIIESL KAYKGAIIAVSHDRDFIDQVFDQVYKLDYNGLRKIK >gi|229269856|gb|GG666055.1| GENE 54 61475 - 61732 317 85 aa, chain + ## HITS:1 COG:no KEGG:Apre_0588 NR:ns ## KEGG: Apre_0588 # Name: not_defined # Def: transcriptional regulator, AbrB family # Organism: A.prevotii # Pathway: not_defined # 1 84 1 84 85 125 88.0 6e-28 MFVELKAKSQVTIPKDIVNSMGLKQGDQFEAIEDNGKIILVPVAIYPEHVIKNLKAQVNE IKESIKNGKQPVFDSIDSLFEELDK >gi|229269856|gb|GG666055.1| GENE 55 62178 - 63089 778 303 aa, chain - ## HITS:1 COG:mlr1887 KEGG:ns NR:ns ## COG: mlr1887 COG1082 # Protein_GI_number: 13471795 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Mesorhizobium loti # 1 303 1 303 304 237 38.0 3e-62 MKLGFLSSIVPDLSFEEVIDFAAEVGYETVEVACWPSGKSERRYGGVTHIDVCNLTEDKI SYIKKYCEEKNVSISALGYYPNNMDQDLEKREFYNNHLLKVIDAADKLGIGLVNTFIGRM TDRNLEDNINELNSVWDPILAHAEKRNIAVGIENCPMLFTYDEWPGGQNLGSSPHNFRLI FEKLKYKKIGINFDPSHHIIQDMEYEEFFKKFKDKIYHLHIKDMKIDREKLNEYGRLVPP NFYTIPKIPGHGDVDWSKFIRSAREIGYNGPVVVEIEDRSFENSLEDRLNALKISYRYMR NYM >gi|229269856|gb|GG666055.1| GENE 56 63091 - 64053 911 320 aa, chain - ## HITS:1 COG:BMEI0392 KEGG:ns NR:ns ## COG: BMEI0392 COG1172 # Protein_GI_number: 17986675 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components # Organism: Brucella melitensis # 4 313 16 328 334 171 38.0 2e-42 MSEKKKKLRLTDYSSIIAFLVIFFIAVLVKGTTFLSLRNFTNILLNNAVIGIIALGMTMI IITGGIDLSVGSQLAMSGLIGITVLNTTDSILLSILASLVVGILSGLLSGVLISNFKIPA FIVTLGTTSIYRSLSQYFYHGGGILAKGTKVDQFLAISNTKILGIIPTLVLYWLILSLTI GFIMKKTNFGRYIYGSGSNEQAANLSGVNTKKTVMLTYVLAGFLVALASLMEASRLGSMN SASSGLSYDMDSIAAVVIGGTRMSGGYGTIIGTVFGTLTLGIINNMLNLLGVNSFLVGAI KGAIIICAVLLQKYLEKREE >gi|229269856|gb|GG666055.1| GENE 57 64046 - 65404 1264 452 aa, chain - ## HITS:1 COG:AGl2027 KEGG:ns NR:ns ## COG: AGl2027 COG1129 # Protein_GI_number: 15891132 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, ATPase component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 36 448 90 501 505 335 41.0 8e-92 MNILAGVIDYDSGQIFYKEKQVDKDNKGMEFLREKISFVHQELALIPDLTVAENLFFGQE IKKSFFLDNKKMNENAKDILKTLQVEIDPTLRVNNLNSSYQQVIEISKAIMKNSEVIILD EPTSSLSENEIKELFKVIRKLKDQGIAIIFISHKLNEVLEICDSYTVLRDGVLVKMGQIN SSLKESDLAKFMVGKDVDNKNIYTKRKLGPVILKTENLSRDKEFEDINISIKKGEIVGVT GLLGDGRSEVFETIYGNKPKYEGKVIFEDKEIKCNSTSKSIQRKISYVPRNRKTNSIIKH LSISDNLNISNFRNLSKNGIIENDKIEKQNKFFKDKLNIKLASFSDLITSLSGGNQQKVI ISRALSINPKIVILDNPTQGVDVGAKFEIYHHIIELAEEGISFFILSNEAHEIMEVCDRA YVMFHGQIRKELQREDFSEEHIMTIATGGDNE >gi|229269856|gb|GG666055.1| GENE 58 65650 - 66477 689 275 aa, chain - ## HITS:1 COG:no KEGG:CD0422 NR:ns ## KEGG: CD0422 # Name: not_defined # Def: hypothetical protein # Organism: C.difficile # Pathway: not_defined # 8 275 5 272 272 453 89.0 1e-126 MRYCEVIFVSKINVEGSEISIIAIDNRDYISLTDMVRNAENGVALIEKWLRNKNTIEFLG IWEEMYNANFNSTEFEGIKNEAGFNRFILSVKQWVNKTNSIGIIAKAGRYGGTYAHKDIA FEFASWVSPYFKLYLIKEFERLKEEEQKQLGWDIKRNLAKINYKIHTDAIKNKLVPEKLS KERINYIYASEADILNVALFGMTAKEWRENNPELKGNMRDYADISQLVCLSNLENLNAVF INEGMDATERIEKLNAIAIEQMRILTESERIKKLK >gi|229269856|gb|GG666055.1| GENE 59 66651 - 68171 756 506 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 309 10 301 301 138 31.0 3e-32 MNKIAIYLRLSEEDYHKVDESVSIVNQRDYIKSYIENETSLKSCEIEEYVDDGYSATNTN RPSFLRLIEDIKSGKVGTIIVKDMSRFSRDYILLGDYLSNIFPFLKIRFIAINDCYDSIN ENGNGLDMDTQFKTLYYDLFSKELSEKVRSSIRQIKSQGKNINWAAPFGYIKDPKDKHSI IIDEKTAFIVKEAFDLLLKGYSCIQVANIFNEKGYITRSERKEELKLSDYTGNLITGSEV KKRVWTNAAISQITRNELYTGDYVYNKFKETKIGGRKRILLPEEEWKILPNTHEAIISRE VFDKVKKIKEKRSFGGYTGNKNRSIFSDKIFCKECGRHMSFRSDIRQKKNSDKIYKYKSY YCNLCKAEKTPNNIKEKDIIELIKPKLKDFKIQNTLNEEKVIEHKNVKEEILKEISILNS NLQIIYENYKKKNISKEDYLKEKTFIQDKKILLESKLEKLKSEEIDSRKETDITVLDEES LLKAYVDNKIDKIIVSRSGEIEIVET >gi|229269856|gb|GG666055.1| GENE 60 68164 - 68796 130 210 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|256544824|ref|ZP_05472196.1| ## NR: gi|256544824|ref|ZP_05472196.1| site-specific recombinase [Anaerococcus vaginalis ATCC 51170] site-specific recombinase [Anaerococcus vaginalis ATCC 51170] # 1 210 371 580 580 347 96.0 3e-94 MKKQYGPRGLKYHDEICYCYYCKGGDRLKLEKSHVRIYETDLDKILVDTFKRLFSSFYKK DKRLQLKIYLESISAKKINQVSIKTDVNNKKIASLRINLQEQYENYVKGDILLSDFKIES KKINNQIKTLKNELKVFDERIRNIKKIKREIIEFIDVLFCCLDAKSIEVDKELVDTLISH IEISEYKQVTIYFKFNLDKDMGKQLEVEHE >gi|229269856|gb|GG666055.1| GENE 61 68849 - 69919 653 356 aa, chain - ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 29 325 8 301 301 142 32.0 7e-34 MRYAVARTKNRHISQSETEVGKVIENIYIAGIYARLSQERKEAYRDKSNSLEMQEELCIN AAKEKDIKILRVYKDYEYSGTNFKRPAFIEMMEDIRTGRINCIIVKDMSRFGREYLEIAN YIEKVFPFLGVRFISVNDNLDTKDGIKSEQSYEIAIKNIFNDLYAKDISMKIKASKEIKM KQGSFIGAMAPYGYKVDKIDGKRVLVMDEKASDVVRLIFYMAGQGKSNMQIARELTKTYT TPDEYKRTGKIFKDKEDTKQWDISYISKMLSDEVYIGNLIQRVYSNRHDPSRRSKFRDKE EWIITENTHEGLIDKTTFENIREIKEKKQNYLPYHSLKNIIKDGKEKCWSKNSKRS >gi|229269856|gb|GG666055.1| GENE 62 69900 - 70478 308 192 aa, chain - ## HITS:1 COG:no KEGG:SPAP_0910 NR:ns ## KEGG: SPAP_0910 # Name: not_defined # Def: site-specific recombinase # Organism: S.pneumoniae_AP200 # Pathway: not_defined # 1 166 372 539 556 76 31.0 7e-13 MKSYIEFNENLYSKVQRIDINKNLKDNQIPILKREKAMTEELLSSLYLDLKEDVISKEEY QLFRKNYIEKLTKLDESIEYRLRKQEYTKEKIDKNKSWIIDINKYKNLSEIDRLSVVMLI DKIFISEDKTIDVRFNHTEELSLLEEMTKTDKPDIKSNIIKKKSVYISRKSKTIPTAMNK SLVSAESEVCCG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:00:28 2011 Seq name: gi|229269855|gb|GG666056.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD13, whole genome shotgun sequence Length of sequence - 90612 bp Number of predicted genes - 99, with homology - 98 Number of transcription units - 33, operones - 20 average op.length - 4.3 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 117 - 176 5.8 1 1 Op 1 . + CDS 255 - 383 173 ## 2 1 Op 2 . + CDS 419 - 1678 1216 ## COG2312 Erythromycin esterase homolog 3 2 Tu 1 . + CDS 2406 - 2576 175 ## gi|227484600|ref|ZP_03914916.1| hypothetical protein HMPREF0072_0003 + Prom 2604 - 2663 5.4 4 3 Op 1 . + CDS 2690 - 3004 450 ## SPCG_1017 hypothetical protein 5 3 Op 2 . + CDS 2976 - 3203 275 ## SPG_0962 hypothetical protein + Prom 3281 - 3340 7.6 6 4 Tu 1 . + CDS 3412 - 4254 836 ## COG1307 Uncharacterized protein conserved in bacteria + Term 4259 - 4310 8.4 - Term 4249 - 4294 5.4 7 5 Op 1 . - CDS 4328 - 5233 895 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 8 5 Op 2 . - CDS 5282 - 5701 477 ## Btus_0111 thioesterase superfamily protein + Prom 5672 - 5731 6.6 9 6 Op 1 . + CDS 5815 - 7143 1221 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 10 6 Op 2 . + CDS 7143 - 7700 206 ## PROTEIN SUPPORTED gi|52081538|ref|YP_080329.1| ribosomal protein S2 + Term 7831 - 7860 2.1 + TRNA 7732 - 7818 66.6 # Leu CAA 0 0 11 7 Op 1 . + CDS 8086 - 8877 339 ## smi_1975 hypothetical protein 12 7 Op 2 . + CDS 8864 - 9661 377 ## smi_1974 hypothetical protein 13 7 Op 3 . + CDS 9673 - 10317 242 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 + Term 10463 - 10502 -0.2 14 8 Tu 1 . + CDS 11032 - 11253 334 ## gi|227484611|ref|ZP_03914927.1| hypothetical protein HMPREF0072_0014 + Term 11270 - 11303 2.4 + Prom 11276 - 11335 6.8 15 9 Op 1 4/0.000 + CDS 11377 - 14010 3449 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 16 9 Op 2 1/0.250 + CDS 13997 - 14599 572 ## COG0237 Dephospho-CoA kinase 17 9 Op 3 . + CDS 14586 - 15242 581 ## COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 18 9 Op 4 12/0.000 + CDS 15317 - 16645 1500 ## COG4656 Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 19 9 Op 5 . + CDS 16654 - 17637 1185 ## COG4658 Predicted NADH:ubiquinone oxidoreductase, subunit RnfD 20 9 Op 6 . + CDS 17627 - 18169 689 ## Apre_1325 FMN-binding domain-containing protein 21 9 Op 7 3/0.000 + CDS 18178 - 18801 682 ## COG4660 Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 22 9 Op 8 12/0.000 + CDS 18810 - 19385 716 ## COG4657 Predicted NADH:ubiquinone oxidoreductase, subunit RnfA 23 9 Op 9 . + CDS 19395 - 20195 1091 ## COG2878 Predicted NADH:ubiquinone oxidoreductase, subunit RnfB + Term 20204 - 20235 1.8 + Prom 20197 - 20256 8.0 24 10 Op 1 3/0.000 + CDS 20298 - 20696 371 ## COG5341 Uncharacterized protein conserved in bacteria 25 10 Op 2 . + CDS 20693 - 21214 522 ## COG4769 Predicted membrane protein 26 10 Op 3 4/0.000 + CDS 21214 - 21894 600 ## COG2003 DNA repair proteins 27 10 Op 4 22/0.000 + CDS 21904 - 22914 1226 ## COG1077 Actin-like ATPase involved in cell morphogenesis 28 10 Op 5 . + CDS 22921 - 23823 958 ## COG1792 Cell shape-determining protein 29 10 Op 6 . + CDS 23816 - 24307 478 ## Apre_1316 hypothetical protein 30 10 Op 7 . + CDS 24316 - 27687 4102 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 31 10 Op 8 . + CDS 27700 - 28323 687 ## Apre_1314 hypothetical protein 32 10 Op 9 . + CDS 28359 - 29246 711 ## COG1530 Ribonucleases G and E 33 11 Op 1 . - CDS 29235 - 29489 294 ## COG2827 Predicted endonuclease containing a URI domain 34 11 Op 2 . - CDS 29489 - 30094 757 ## COG2137 Uncharacterized protein conserved in bacteria - Prom 30203 - 30262 8.4 + TRNA 30413 - 30489 65.8 # His GTG 0 0 + TRNA 30491 - 30576 70.5 # Leu TAG 0 0 - Term 30395 - 30461 12.2 35 12 Tu 1 . - CDS 30659 - 31108 787 ## gi|227484633|ref|ZP_03914949.1| hypothetical protein HMPREF0072_0036 - Prom 31167 - 31226 9.3 + Prom 31519 - 31578 8.7 36 13 Tu 1 . + CDS 31614 - 32408 1284 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Term 32418 - 32466 3.0 + Prom 32461 - 32520 7.3 37 14 Tu 1 . + CDS 32565 - 33953 1258 ## COG0534 Na+-driven multidrug efflux pump + Prom 33955 - 34014 10.4 38 15 Op 1 33/0.000 + CDS 34040 - 34753 837 ## COG0528 Uridylate kinase 39 15 Op 2 . + CDS 34755 - 35315 736 ## COG0233 Ribosome recycling factor 40 15 Op 3 . + CDS 35394 - 36416 893 ## COG1459 Type II secretory pathway, component PulF 41 15 Op 4 . + CDS 36418 - 36804 494 ## Mahau_1123 hypothetical protein 42 15 Op 5 . + CDS 36839 - 37528 261 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 43 15 Op 6 . + CDS 37525 - 37947 516 ## Apre_0651 methylation site containing protein + Term 37979 - 38018 6.1 44 16 Op 1 . + CDS 38027 - 38266 152 ## gi|227484642|ref|ZP_03914958.1| hypothetical protein HMPREF0072_0045 45 16 Op 2 . + CDS 38263 - 38733 359 ## Apre_0653 hypothetical protein 46 16 Op 3 . + CDS 38730 - 39131 492 ## gi|227484644|ref|ZP_03914960.1| hypothetical protein HMPREF0072_0047 47 16 Op 4 . + CDS 39196 - 40389 1619 ## COG0282 Acetate kinase 48 16 Op 5 14/0.000 + CDS 40454 - 40633 322 ## PROTEIN SUPPORTED gi|227484646|ref|ZP_03914962.1| ribosomal protein L32 + Term 40635 - 40693 11.7 + Prom 40649 - 40708 6.5 49 17 Op 1 . + CDS 40728 - 41705 1184 ## COG0416 Fatty acid/phospholipid biosynthesis enzyme 50 17 Op 2 . + CDS 41698 - 41922 430 ## Apre_0658 phosphopantetheine-binding 51 17 Op 3 3/0.000 + CDS 41922 - 42635 881 ## COG0571 dsRNA-specific ribonuclease 52 17 Op 4 . + CDS 42628 - 43698 1043 ## COG1243 Histone acetyltransferase + Prom 43705 - 43764 5.9 53 18 Op 1 . + CDS 43874 - 47206 3401 ## COG1196 Chromosome segregation ATPases + Prom 47211 - 47270 2.7 54 18 Op 2 26/0.000 + CDS 47292 - 47777 636 ## COG0242 N-formylmethionyl-tRNA deformylase 55 18 Op 3 20/0.000 + CDS 47770 - 48705 1089 ## COG0223 Methionyl-tRNA formyltransferase 56 18 Op 4 4/0.000 + CDS 48698 - 49984 1055 ## COG0144 tRNA and rRNA cytosine-C5-methylases 57 18 Op 5 5/0.000 + CDS 49977 - 50999 1093 ## COG0820 Predicted Fe-S-cluster redox enzyme 58 18 Op 6 17/0.000 + CDS 51002 - 51727 748 ## COG0631 Serine/threonine protein phosphatase 59 18 Op 7 7/0.000 + CDS 51737 - 53668 2029 ## COG0515 Serine/threonine protein kinase 60 18 Op 8 10/0.000 + CDS 53668 - 54537 764 ## COG1162 Predicted GTPases 61 18 Op 9 . + CDS 54531 - 55190 795 ## COG0036 Pentose-5-phosphate-3-epimerase + Term 55199 - 55241 1.1 - Term 55240 - 55267 -0.8 62 19 Tu 1 . - CDS 55305 - 55493 326 ## PROTEIN SUPPORTED gi|227484660|ref|ZP_03914976.1| possible ribosomal protein L28 - Prom 55606 - 55665 8.8 + Prom 55549 - 55608 5.7 63 20 Op 1 1/0.250 + CDS 55631 - 56533 985 ## COG0812 UDP-N-acetylmuramate dehydrogenase 64 20 Op 2 . + CDS 56534 - 57382 702 ## COG1660 Predicted P-loop-containing kinase 65 20 Op 3 . + CDS 57384 - 58100 710 ## COG2365 Protein tyrosine/serine phosphatase 66 20 Op 4 . + CDS 58102 - 59004 933 ## COG1481 Uncharacterized protein conserved in bacteria 67 20 Op 5 3/0.000 + CDS 59033 - 62479 3514 ## COG0587 DNA polymerase III, alpha subunit 68 20 Op 6 12/0.000 + CDS 62489 - 63448 1213 ## COG0205 6-phosphofructokinase 69 20 Op 7 . + CDS 63457 - 65229 2344 ## COG0469 Pyruvate kinase 70 20 Op 8 . + CDS 65229 - 66482 1385 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase + Prom 66519 - 66578 1.9 71 21 Tu 1 . + CDS 66641 - 66925 147 ## SZO_12680 membrane protein + Term 66957 - 66999 2.3 + Prom 66930 - 66989 4.8 72 22 Op 1 . + CDS 67015 - 67785 533 ## SZO_12980 replication initiation protein 73 22 Op 2 . + CDS 67782 - 68633 643 ## COG1484 DNA replication protein 74 22 Op 3 . + CDS 68666 - 69115 342 ## SEQ_0732 hypothetical protein 75 22 Op 4 . + CDS 69112 - 70155 551 ## COG3505 Type IV secretory pathway, VirD4 components 76 22 Op 5 . + CDS 70195 - 72033 1506 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs 77 22 Op 6 . + CDS 72109 - 72681 553 ## COG1309 Transcriptional regulator 78 22 Op 7 . + CDS 72732 - 73250 316 ## COG4283 Uncharacterized conserved protein + Term 73304 - 73338 2.1 + Prom 73304 - 73363 4.8 79 23 Op 1 35/0.000 + CDS 73391 - 75130 185 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 80 23 Op 2 . + CDS 75123 - 76832 191 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 81 23 Op 3 34/0.000 + CDS 76835 - 78352 230 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 78378 - 78437 5.0 82 23 Op 4 . + CDS 78483 - 79046 330 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 83 23 Op 5 . + CDS 79057 - 79641 685 ## HMPREF0868_0145 hypothetical protein + Term 79823 - 79869 6.1 + Prom 79791 - 79850 6.0 84 24 Op 1 . + CDS 79907 - 80323 280 ## FMG_0975 hypothetical protein + Term 80335 - 80375 3.3 85 24 Op 2 . + CDS 80408 - 80737 344 ## gi|227484684|ref|ZP_03915000.1| conserved hypothetical protein + Term 80830 - 80860 1.2 + Prom 80877 - 80936 4.1 86 25 Op 1 . + CDS 81012 - 82634 1283 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 87 25 Op 2 . + CDS 82637 - 83389 510 ## HMPREF0837_11437 phage-associated protein + Prom 83459 - 83518 6.8 88 26 Op 1 . + CDS 83563 - 83886 390 ## FMG_0971 hypothetical protein 89 26 Op 2 . + CDS 83908 - 84915 824 ## FMG_0970 hypothetical protein + Term 84962 - 85007 5.7 + Prom 84938 - 84997 3.8 90 27 Tu 1 . + CDS 85025 - 85210 279 ## gi|227484689|ref|ZP_03915005.1| conserved hypothetical protein + Prom 85226 - 85285 2.5 91 28 Tu 1 . + CDS 85312 - 86034 595 ## COG3505 Type IV secretory pathway, VirD4 components + Term 86139 - 86180 3.0 + Prom 86120 - 86179 3.0 92 29 Op 1 . + CDS 86200 - 86511 409 ## CD1851 putative single-stranded DNA binding protein 93 29 Op 2 . + CDS 86515 - 86673 264 ## CD1852 putative conjugative transposon membrane protein + Prom 86703 - 86762 8.4 94 30 Tu 1 . + CDS 86791 - 87009 323 ## COG3655 Predicted transcriptional regulator + Prom 87183 - 87242 6.2 95 31 Tu 1 . + CDS 87265 - 87783 605 ## COG4283 Uncharacterized conserved protein + Prom 87859 - 87918 8.6 96 32 Op 1 8/0.000 + CDS 88035 - 88337 266 ## COG1725 Predicted transcriptional regulators 97 32 Op 2 . + CDS 88337 - 89212 688 ## COG1131 ABC-type multidrug transport system, ATPase component 98 32 Op 3 . + CDS 89216 - 89860 442 ## gi|227484697|ref|ZP_03915013.1| hypothetical protein HMPREF0072_0100 + Term 89873 - 89913 -0.7 + Prom 89863 - 89922 6.5 99 33 Tu 1 . + CDS 90077 - 90367 384 ## M28_Spy1086 hypothetical protein Predicted protein(s) >gi|229269855|gb|GG666056.1| GENE 1 255 - 383 173 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MINEEISKEAGQVAQTIITYTIKAAKAKMEAEKEAAKEEATV >gi|229269855|gb|GG666056.1| GENE 2 419 - 1678 1216 419 aa, chain + ## HITS:1 COG:SMb20088_2 KEGG:ns NR:ns ## COG: SMb20088_2 COG2312 # Protein_GI_number: 16263836 # Func_class: R General function prediction only # Function: Erythromycin esterase homolog # Organism: Sinorhizobium meliloti # 59 320 47 332 445 65 22.0 2e-10 MIKKIFKGILIFLVSLIILIGIGDFLWINLPKLNARKNISDIEDYGKAVSQINLDDNIQV VGLGEATHGNSDFQDLKLEVLKTLVEKNNLKSFAIEADFGEGMIINNYIHGNKRDENISR IFSFNIYHTKNMSDLINYMFDYNQKAKDEDKLSFYGFDMQNPEKSIDLILDFCKENNILQ EKDLKKELSFIKDEKIKISQIKDKEALLLEIKAYADALSSSDAKIASRALTNILNSIKYY ELDFNDYVKVNNVRDELMAENVKWISDFEKSKGNKMLLISGHNGHIAKSEKFYEPMGSHL KKIFGEKYFIIGTDFYKGIVNINVAGPDNKRSNHVVVSADPLAYSARKFKGKYYLDFTKV KDGETFDLINKEINMISLGEGYSPLMKFIPTTYRVKEVPKDLYDAMIFVYYAKPIAVND >gi|229269855|gb|GG666056.1| GENE 3 2406 - 2576 175 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484600|ref|ZP_03914916.1| ## NR: gi|227484600|ref|ZP_03914916.1| hypothetical protein HMPREF0072_0003 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0003 [Anaerococcus lactolyticus ATCC 51172] # 1 56 1 56 56 72 100.0 1e-11 MLKGIGYLLFGIGLGFMSPKFIKQYKKDKNIENTLEVIGVLLLAASSILLGVLEFM >gi|229269855|gb|GG666056.1| GENE 4 2690 - 3004 450 104 aa, chain + ## HITS:1 COG:no KEGG:SPCG_1017 NR:ns ## KEGG: SPCG_1017 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_CGSP14 # Pathway: not_defined # 1 84 1 84 134 105 92.0 7e-22 MINEEISKEAGQAAQTIITYTIKAAKESINLDKEIRKKMNETLEKANGNLKRLMGDEIKI KDLYKKGQLENISIDQSDLKDLKKRTKQTWSKLLGNEKQRKQKL >gi|229269855|gb|GG666056.1| GENE 5 2976 - 3203 275 75 aa, chain + ## HITS:1 COG:no KEGG:SPG_0962 NR:ns ## KEGG: SPG_0962 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 74 96 169 175 75 95.0 6e-13 MKNKESKNYEIFFQAKDIKVMEYAFKQVIAKENKKEKESILKQIKKYKDLTKNKDKTKEK VKRKVKEKVKPAKKI >gi|229269855|gb|GG666056.1| GENE 6 3412 - 4254 836 280 aa, chain + ## HITS:1 COG:CAC1624 KEGG:ns NR:ns ## COG: CAC1624 COG1307 # Protein_GI_number: 15894902 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 278 1 279 280 133 30.0 4e-31 MEKIAILTDSASNIKENISEGIFVVPLYVNFENESKRDLLEISPSELFARIDEEKPYTSA PSIEDFREKIKMIWEAGYSKILAIAVSHALSGSYNAMRLALESQDMEYVLIDSLNITMSE GLLVMYAKSIVGQVDSLDQLAKKIEEKINDTRLIATVSDLKYLIRGGRLSTVEGLIGGTL RINPVLGLDEKGTIKNCKSVMGKKRALNFIVDETKKALQKAEKYYLAIAYGKDKEDIAGI KEKLSDLIEGANLYLEGPVTAVLGTHSGPSVYAVSFLKIK >gi|229269855|gb|GG666056.1| GENE 7 4328 - 5233 895 301 aa, chain - ## HITS:1 COG:BH1953 KEGG:ns NR:ns ## COG: BH1953 COG1597 # Protein_GI_number: 15614516 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Bacillus halodurans # 63 297 57 295 295 102 29.0 1e-21 MRKILFIINSKAGKTEFDIRKEDIEETFRKAGRLDEIEVVDTRYKNHTKFLIDAFDSLAY DEKIVIICGGDGSLNELVNVAYGKNMTLGLIPTGTGNDFAKNFSYESFSLDSLLDFKTKK IDLIKINDFYSINVTSIGFDTQVLKRAYDYLEKNPKLGKSAYTKATIRSLTNLTYEKLNF DLKLIDGSSFQIKGEYLISALCNGAFYGSGFNPAPEAKIDDGVLNLILADKIPLIKLPSM IIKYKKGLHQSSKYLREIKVTSGTIKSKTEFLANADGEIFKTNEIKFEALPKALNWVIFS K >gi|229269855|gb|GG666056.1| GENE 8 5282 - 5701 477 139 aa, chain - ## HITS:1 COG:no KEGG:Btus_0111 NR:ns ## KEGG: Btus_0111 # Name: not_defined # Def: thioesterase superfamily protein # Organism: B.tusciae # Pathway: not_defined # 7 117 36 146 164 76 35.0 4e-13 MSFNDQFDIEIREIDENNLILRCKMEENFLNEINAVHGGVLMTMADNASGFIASAKKYTA PTLSMTTNFLRPLMATEYIYAKAKVIKRGSRIITVDCEVYGDDEKICAVTRAEFAILGKK INPSASAELAYTKGKYRKF >gi|229269855|gb|GG666056.1| GENE 9 5815 - 7143 1221 442 aa, chain + ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 82 429 68 418 430 229 39.0 6e-60 MKKKYLLIFLSLIMALGLGACSNNKDSKEITIKTVTDLITRLDNYQKVKEEEKRLAEEEK KQKTSKKSIQEIEKEEIEAKAKKELEERAKKKPVIKKAKLKAFGDIMAHIAQIQYAHNKG GGEYDFSDQFTYIKDFVKNADISIGNFETTSNPNLPYAGFPRFNVPESYLKNLKDIGFDI VTTANNHSMDTELEGVMTTMDAVKKAGLDYVGSFKNKSERILLKEVNGIKIAFLAYTYGC NGRENLIVPREEVDNLCYLSNEEEIKKDISMAKAQGADFVVVYPHWGIEYQSMPNEAQTS LGRKMIDWGADLVIGNHPHVVEPVELYQASDGREGLIAYALGNFISYQNYENNKDIRVEQ SLALEIDLEKDLKSGKKKIADVTFHPIWVGSYYNEYGIDVKNHLTEDFLEGGKYFDLVNE SQRARIKKANDMTLKIANTGVQ >gi|229269855|gb|GG666056.1| GENE 10 7143 - 7700 206 185 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|52081538|ref|YP_080329.1| ribosomal protein S2 [Bacillus licheniformis ATCC 14580] # 3 168 10 174 174 84 33 3e-15 MVNFELNILNAIQNLRSTPLDKFMVTISSVGNLSLIWIAYILIFLAAKELKNQGKIMIIA FILNILLVNLLVKNLVARPRPYEVAKFTGLLVHKLSDNSFPSGHTSYAFTFATILTILNK NKPLIIFTDLLAVLIAFSRLYLYVHFPIDVLAGIGFGILIGILSIKIYKSQKYRQIKEKY NLHLA >gi|229269855|gb|GG666056.1| GENE 11 8086 - 8877 339 263 aa, chain + ## HITS:1 COG:no KEGG:smi_1975 NR:ns ## KEGG: smi_1975 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 263 1 263 263 290 62.0 5e-77 MSYRLNVISKVMRSRKFFLSILIILLSMIFSLTAFVEEGMEYFFKHDYAMTFLQGYNGDR SLLVILAPLIATLPFSAQHVENSKSGTMKYLVARMGYKKYFNSNFIINFLTSFITFAFGM VIFFIGCFVFFSKNLNMDAYMGMTGVSTYKKLIDKSALLYILAIILHCAFVGACYSSVGL SLSYFIKNKFVAWIGPFIIATIGSLFAMFVGLTKLEPMAIFDVSRVQGMTPIFIISYLLI SLFLAYILSLLKFKKDIENDEEI >gi|229269855|gb|GG666056.1| GENE 12 8864 - 9661 377 265 aa, chain + ## HITS:1 COG:no KEGG:smi_1974 NR:ns ## KEGG: smi_1974 # Name: not_defined # Def: hypothetical protein # Organism: S.mitis_B6 # Pathway: not_defined # 1 265 1 268 268 293 66.0 5e-78 MKKYKDLKTFYIIFIYLLVAGSILASFSQLISFKYKYGNFNFGEMILLMFNDSYTGYFTF PFLLGFVLMIQSPVEGNIFFTLTRYTNRKEFYKNKHTKVIKSLLDYVGCICLFCLIVGIG SSNFGFNISQATKEFAKIYLLGNFETNNIILEIFKLVILQVLLLYFFSLVHALLIQFRIS QSLVFVIYTGILIIAAGMSLGFFGDVIKDFSLFSLASSINGCGIKFIYRLLVLAGIDLIL LILNFKIFENKDINLPKGSKEYQNE >gi|229269855|gb|GG666056.1| GENE 13 9673 - 10317 242 214 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 4 214 5 222 305 97 28 2e-19 MDLIRLENVSKAFGNKKVIDNISYNFEAGKIYGIVGTNGCGKSVLFKLISGLMKASSGKI IVNNVVVGKNGAMPADLGLLIEHPGFLPNLTGFENLDQLAAIKNKITKADIDEILKEVAL YQDKDVKVKKYSLGMLQRLGIAQALMEKPKLLLLDEPFNSMDHEGVVELREIIKSYIRSS GATMLITSHNKEDIDILSDQVLVLKNGKLKELKD >gi|229269855|gb|GG666056.1| GENE 14 11032 - 11253 334 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484611|ref|ZP_03914927.1| ## NR: gi|227484611|ref|ZP_03914927.1| hypothetical protein HMPREF0072_0014 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0014 [Anaerococcus lactolyticus ATCC 51172] # 1 73 1 73 73 136 100.0 5e-31 MKNTKKCPKCGSSEIIKIPGKAGAYGSGNNIPIGASILSAVPVDRYLCTECGYSEEWVDL DNIEKVEKKYRDK >gi|229269855|gb|GG666056.1| GENE 15 11377 - 14010 3449 877 aa, chain + ## HITS:1 COG:SA1513_2 KEGG:ns NR:ns ## COG: SA1513_2 COG0749 # Protein_GI_number: 15927268 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Staphylococcus aureus N315 # 326 877 1 552 552 453 45.0 1e-127 MKKTVMLIDGSSLIFRAFFALPNLSNNDGVMTNGVYGFLTMYRNAFDKYKPDYVLVAFDR SSKTFRNDEYKDYKANRDKTPNELSYQFGILKDVLDSMGVKYTDLDGFEADDIVGTYARM AKEAGDEAVLITGDRDYLQLVDDNVLVYLSKKGVSDTVEYTVDKIKEEYGITPKQLIDVK GLMGDKSDNIPGVDGIGEKRALEFIRKYGSIENLYDNLDEISGKKTKESLENNEAVAYMS KKIGTIVTHAPVEFDYDDLALGEVDKEGLREKFSKLNFNKFLEELDGDGSESESKEFTYK IGGNLKDLIDSSKKTKEIFFKSVYDGENYIHSEIYSLAIKTKDTDTYIIEPEKISELKNI FEDKTINKISFDIKEEMVLLDKLDIDLIGPYDDLMLMHYLIDPSRSSYDLKLLSQSYLTY ELDSDESLIGKGAKTKKYAEVDQDDLAKLLASQVNAIEDSRDKVFKNLAEYEMVDLYENI EKRLARVLASMEIIGFGTDRKILEGLKADLEKQIEAITSEIYDLAGSEFNINSTKQLGEV LFKDLDLPVVKKTKTGFSTDAKVLEKLRDKHPIIEKIERYREIYKLRSTYIEGLENAIDE DGRIRSTFRQNIASTGRLSSQEPNLQNLPIKTDEGRAIRKAFKAGEGKILIDADYSQIEL RILASLADDKNMQDAFNRGIDIHTQTASEVFHTPLDEVTKLQRSEAKAVNFGIIYGISDY GLSQNLNIPRPRAKEYIDKYKKSYPQIKEYMDDVVQLARSQGYIETLFKRRRYIPEISSR NFNVRSFGERIALNTPIQGTAADIIKIAMIDTYNKLKEEGLDAKIILQIHDEIIIESSEK DKEKARDILKKCMEGAAKLKVDLLVDIGFGESMYESK >gi|229269855|gb|GG666056.1| GENE 16 13997 - 14599 572 200 aa, chain + ## HITS:1 COG:BH3150 KEGG:ns NR:ns ## COG: BH3150 COG0237 # Protein_GI_number: 15615712 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Bacillus halodurans # 6 196 3 196 201 102 32.0 5e-22 MNPNKIVITGTIGSGKSAVSEIVKDLGFKVISADEVNKKLLEEGGQNYEAIKADPFFRKA FDGNILDKKHLAKMIFSAPDLMKRLNSLTHPIIVREIENEINRIGEKNIFIEIPLFYQMT VRFPADLVLFVEADKNIQAQRLAKRDDIGGFYAESKIRNQEALMGPRYANEIVIKNNTSL EDLRENVKKILRMEKIYESN >gi|229269855|gb|GG666056.1| GENE 17 14586 - 15242 581 218 aa, chain + ## HITS:1 COG:slr0534 KEGG:ns NR:ns ## COG: slr0534 COG0741 # Protein_GI_number: 16332023 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) # Organism: Synechocystis # 40 185 689 833 847 109 42.0 4e-24 MKVIKWFGKLIGFIFLAILILFVVCYATIAYQTSRTRISYQDEIYKCSEKYNVDPLLTAS IIKVESDFDKDAKSHQGAQGLMQLLNETASHAAELTGKEYFPDKLSDVEYNLDLGIAYYD YLYRYYNNRDLALAAYNGGVGNVDKWIKEGLLDPANPDVLKIPFEETRQYVTKIDANYDV YKKFYKKGLPSEKRMANLKQLAFDNFMVFIEDIIANIR >gi|229269855|gb|GG666056.1| GENE 18 15317 - 16645 1500 442 aa, chain + ## HITS:1 COG:TM0244 KEGG:ns NR:ns ## COG: TM0244 COG4656 # Protein_GI_number: 15643016 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfC # Organism: Thermotoga maritima # 6 438 18 444 451 312 42.0 9e-85 MAANTVTFAHGVKMEEYKELSENSSLHTANIPKLVTIPLTQHIGAPSKCNVKKNDEVAVG DLLGSAVGNFSANIHSSVAGVVKDVIDIQSASGKNCKAVVIDTEGFDQEVEYTEVKNVTL SPEEIVAKVKEAGIVGMGGAAFPAHVKYSPNKPIDTVIVNGAECEPYITCDDYIMKNYPL HIIKGLIQVLKAVNAKEGVIAIENNKPAAYKSMTEALAEFAKTNKFDGTIKVVSLETKYP QGDEKRLINAILKREVPSGGLPMDVGAVVSNVSTVNAIYEALYMGKPLYERILTVTGRTV KNPQNMRVRIGTSFNDLIEEAGGAEEIAKVINGGPMCGIAQPDLNKPVEKATNCILVFDS KDAFIEDPTPCIRCGRCVSVCPVFLLPNYIHKHALDGRFEKADEEGALDCIECGSCSFVC PARRPLVEAIKFAKRQIRQAGK >gi|229269855|gb|GG666056.1| GENE 19 16654 - 17637 1185 327 aa, chain + ## HITS:1 COG:TM0245 KEGG:ns NR:ns ## COG: TM0245 COG4658 # Protein_GI_number: 15643017 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfD # Organism: Thermotoga maritima # 6 318 2 317 318 241 46.0 1e-63 MENNKQLLVTASPHIRSKRTVANDMLDVIIALIPAGAVSVYYFGYRALVLILASVITCVL AETIFNKCTKRPNSVKDLSAVVTGILLAYNVPFTLPVWQLVIGSVFAIVICKMLYGGIGQ NIVNPALGARAFLMASWSSTMTNFVPTERVATLKTVSDVSMLTAATPLSDPKSYTIMDLF IGHIPGCLGEISALALLIGALYLLVRKVIHIRIPLVYILTTTVILAIFGDKVNLEYILKN ILSGGLILGAFYMATDYTTAPITPKGQIVFGFGCGLITAVIRLWGGYPEGVSYSILLMNL LVPVIEKHTRDRIFGKAKAKKGGKNEQ >gi|229269855|gb|GG666056.1| GENE 20 17627 - 18169 689 180 aa, chain + ## HITS:1 COG:no KEGG:Apre_1325 NR:ns ## KEGG: Apre_1325 # Name: not_defined # Def: FMN-binding domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 179 1 180 181 262 78.0 4e-69 MNNSLKLGFKLLLITSVTALALAFTNNMTKPIIEARQQEELEESLSVVYKADSYEQLDVE KPDTIEAVYKAKGADGDGYVFQILSPGGYGGAIEFLIGVDKDHNITGFAPLNHSESAGFG KQMEEDFFKQGMVGVNMDKEVKASKTGGENEIVGITGATISTTTILRGINAAREVLTKLE >gi|229269855|gb|GG666056.1| GENE 21 18178 - 18801 682 207 aa, chain + ## HITS:1 COG:TM0247 KEGG:ns NR:ns ## COG: TM0247 COG4660 # Protein_GI_number: 15643019 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfE # Organism: Thermotoga maritima # 17 205 7 193 200 165 49.0 7e-41 MEKQTDKKLRVNYGKIFTDGIIKNNPVLVQMVGMCSVLAISSSLTNAVGMGVSVTFVLVM SNLVISLLRNFISDEIRIPSFIVVIAGFVTIVQMLIKAYAPALDKSLGIFIPLIVVNCII LARAEGFASQNGPIPSIVDGISQGLGYTIAISILAFFRELLGSGTLFGMAILPEKYTIGF MVQPASSFIVLGLIFGAFHAIMNRKNN >gi|229269855|gb|GG666056.1| GENE 22 18810 - 19385 716 191 aa, chain + ## HITS:1 COG:FN1592 KEGG:ns NR:ns ## COG: FN1592 COG4657 # Protein_GI_number: 19704913 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfA # Organism: Fusobacterium nucleatum # 19 190 21 192 194 167 54.0 1e-41 MAELFKIIIATIFVSNYVLGQFLGICPTLGVTSKVETARGMGFAVIFVIVLATIITWFIQ HYILEAFNVQYLQTVVFILVIATLVQSVETVMKKSMPALYGALGVYLPLITTNCVVLGVA IKAIDLSYNLVESTVYAFAASIGFMLAIVLLAYLREKIEYNNVPESFKGAPMSLITLGLM AIAFMGFAGLA >gi|229269855|gb|GG666056.1| GENE 23 19395 - 20195 1091 266 aa, chain + ## HITS:1 COG:MA0664 KEGG:ns NR:ns ## COG: MA0664 COG2878 # Protein_GI_number: 20089551 # Func_class: C Energy production and conversion # Function: Predicted NADH:ubiquinone oxidoreductase, subunit RnfB # Organism: Methanosarcina acetivorans str.C2A # 4 264 5 263 264 143 35.0 3e-34 MQNLLLPVAILAIMGFIFAIALGFISEKFHVEKSVKEAAVRECLPGANCGACGFPGCDGL AAAIAKGEAPVNACAIGGASVTAAVAKAMGVEATGADERKVALVNCNGNCEAAKDQYKYQ GLDDCRVQIALFGGKKACDYGCIGCGTCEKTCPFDAIHIINGVAKVNRDKCVACKKCVDV CPKNIIQLVPFNQKQAVLCSSHDKGKDARAKCSNSCIGCSICARTYPEAFEMDNFLSKAV NVDGIDLELLKTAADKCPNKCINIFE >gi|229269855|gb|GG666056.1| GENE 24 20298 - 20696 371 132 aa, chain + ## HITS:1 COG:lin0431 KEGG:ns NR:ns ## COG: lin0431 COG5341 # Protein_GI_number: 16799508 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 3 124 8 133 140 63 30.0 1e-10 MKIKKGDIIVIVGLILLSFGINFAINKAMSGYEGDMLVVEQNGKVIKKLPMDKDTEFKVE YGGHYNTIVIKDKKAYMKKADCQDQICTHMHPIDKEGQSIICLPHRLFLEVESHGDKKDK KDKEDGIDKVVQ >gi|229269855|gb|GG666056.1| GENE 25 20693 - 21214 522 173 aa, chain + ## HITS:1 COG:lin2789 KEGG:ns NR:ns ## COG: lin2789 COG4769 # Protein_GI_number: 16801850 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 2 169 1 168 180 97 37.0 2e-20 MMGKNIKDLTNMALLVALALIISLIELQIPVPVPIPGAKLGLSNIIILVSLYFYGFRVSL TIALLKSFMLVLIIGAVTSFFYSAAGAILSSIAMAIGLKYHDRLFSFIGVSEIGAFAHNI GQIIVSAIIMENVKMFTYFPALVIVGTFSGFFVGLSSNFIIKHMKKINIGENV >gi|229269855|gb|GG666056.1| GENE 26 21214 - 21894 600 226 aa, chain + ## HITS:1 COG:BH3032 KEGG:ns NR:ns ## COG: BH3032 COG2003 # Protein_GI_number: 15615594 # Func_class: L Replication, recombination and repair # Function: DNA repair proteins # Organism: Bacillus halodurans # 1 226 4 229 232 185 42.0 5e-47 MKQTIKDMKLTDRPREKLIKLGHASLSEKELLAIIISTGTDKKNAIELAEEILATFSEEA LLEIEVEELTKINGIKEAKASKIVASLQFGKRIKEKILNKKKYQINSNEEAYEFIKDTIS LKDREYFYTILLNNKNEVISKELISIGDLSSSIVNPREVFKPAIKKSAKSMILAHNHPSG NPSPSKADLLITHRLIDAGEILDITVLDHLIIGHGTYVSLKKDNYI >gi|229269855|gb|GG666056.1| GENE 27 21904 - 22914 1226 336 aa, chain + ## HITS:1 COG:CPn0850 KEGG:ns NR:ns ## COG: CPn0850 COG1077 # Protein_GI_number: 15618759 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Actin-like ATPase involved in cell morphogenesis # Organism: Chlamydophila pneumoniae CWL029 # 3 331 29 358 366 261 41.0 2e-69 MKFKMIATDFAIDLGTSNILVYKKGEGLIINEPSSLVLDENHTKVIAVGQQAKDMLGKTH EDIQVVKPIKNGVITDFNLTEAMLNYFFDKVNVGFSLIQPRVVIVIPSGITDIQKRAVED AALHAGSRDIILVDESLACAYGMNLAPNEPKGILLINMGAGTSQVAVISLNGIVVSSTIN KGGDYLDEKIVDYFREEKSLEIGKNTAEEVKIKLASLKVKDGNNEMEVNGKDLNDSRPNT VKVLSSELVTCILPFADEVCEMVLATLEKTPPEISSDIKKNGFALSGSLSQLSGLAEYIE KKIGLKSYRSEDPSKDAILGAGQILEDPDKFLQYRK >gi|229269855|gb|GG666056.1| GENE 28 22921 - 23823 958 300 aa, chain + ## HITS:1 COG:SA1475 KEGG:ns NR:ns ## COG: SA1475 COG1792 # Protein_GI_number: 15927229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell shape-determining protein # Organism: Staphylococcus aureus N315 # 69 289 71 280 280 68 26.0 1e-11 MAYKRVKKDKKPFILTVVGLSLLILISSQTEGLSKTGSNLANSIFKPIEGVTYSISSAII EQIERTIGSKETREQVLKLEADNRSLVMENARLLATINREEFLKEEAQATKGSDNKYIKA KLINTDVNSMTTHFNIDKGASDGIEKNDIILQAVGDSKFYTGLVGKVTEVYQTTARVETI NSNENDVSFVNANSGDYGVIDIFNKNTIQGYMIDLESKINEKDILLTSGLGGIYPYGIYI GRVSTVTMSEDSLRKNITIKSPVDFSHLYRVLVLKHDSTYTIDDKPVTKEKKQKEGEIYE >gi|229269855|gb|GG666056.1| GENE 29 23816 - 24307 478 163 aa, chain + ## HITS:1 COG:no KEGG:Apre_1316 NR:ns ## KEGG: Apre_1316 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 163 1 161 161 132 52.0 4e-30 MNKFKSFLILFISFILQTSIFSKIDILGANINIIIPVTIAFSQILPNKTGRVGGLLVGLF EDFLFTSLIGVRALSYYLIGVVSSGQFIKVSKDKQAGIIVCILATFFNFVLVNGIYYVFG KSLNSITGYLGLEIIVEAIFNSVVYLGYYELIKKTMYVPTYRI >gi|229269855|gb|GG666056.1| GENE 30 24316 - 27687 4102 1123 aa, chain + ## HITS:1 COG:CAC1246 KEGG:ns NR:ns ## COG: CAC1246 COG0768 # Protein_GI_number: 15894529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Clostridium acetobutylicum # 481 1091 227 883 916 193 29.0 2e-48 MKNSKENRLIFIQVIVVAAILVIAFRLFNVMISKGDYYRDLSDNRKVKEVDELASRGNIY DRNGKILATSIPSFAIKLYKDELMALKDEKRIDLIADLVDILEEDGVNYTEDFNIKLNTF KYKNKEDYFKKKQMPIEEVVDKLIDNDLIEEFLLSCYSEDGIKYETLNTAILALKKRGIV VPVHISQQDGKLKVEYKKNYEKKLASIGHKKDDDPIDVILESVGEDRSVLLSILQNSHAR ILAYKILDSNKLLGDLAMDAYSIKSDQDLIEKKAKLHKVFKKITLDSKASDDFYEIVKNA TIKDVLTSAMVDDKGAYIIPANMLIEELENKGIYANFETEVITESKDDKNQYSVDVRFKN PQAGSAVDELARLAEEHGLIKPLILSEYVKYMAQNANTRNNIYPNIDITQDDPEDWKYTF TIDKKDFYTHYANKDRANSTKATVEILMNEKDGKKILEYLKKVSNLDSYNDVEAVGILTI DNTLNRQGSFGYRPINIVYNLDESTVLKIEEKIDTTSGIVVETIPIRSYPNRNLASHVLG YMGPIATPEEVDKYVKERAYLRDEIIGKTGIEESYQDNLKGKNGRSLVTVDSAGNRRETI SQTKSEPGDDVYLSIDAKLQKQAEDSLKGVLEALRETGYYESEYGTFRPFKMAPHAESGA VVVSDVKTGEVLALASYPNYDPNLFSTGISTSDWEALQVEESEGPLAPRPMLNIATQTAV MPGSTFKLVTALAALEKGLDPLAVNYCHGFMEIGNRRFSCLVYTESGMTHGEENLYGAIR DSCNYYFYTLALGENPEDGDTLSTKLELNDIRLACEMLGLDEETGIEINIPKEARGNVPS IGKKVEVTKLMLKEYLEKNLTLFIKEGVKKTRTEYEQDIADIVKFTDNPNEWSRKAIVDF FDERGYDSLMIPEGQRAGLADTIKYTYLNQAVWDITDMLNIVIGQGQNSYTPIQMNRAIA TITNGGYLNKFTLINKIKNHDSGEVLFENVPEKKRIDIKDKKYLEDIKYGTLLVAKNNAM LKQLPIDIGIKTGTAEVEGKNSDGTDYDTYAWMVGFAPYDNPEIAISIVLTQGDTSYNAS PIMRDIIARYFDLNVEMINAEATAKDIQNLGESTNGNTQNHGR >gi|229269855|gb|GG666056.1| GENE 31 27700 - 28323 687 207 aa, chain + ## HITS:1 COG:no KEGG:Apre_1314 NR:ns ## KEGG: Apre_1314 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 207 1 207 207 121 40.0 2e-26 MQIYLINGKNNIGKTDFAVNLAERLSEDKKVLLTSFFRSEKLNIEDYYKKDGMVSYDISD HFLGLCDLERVVVNENANLGFIIAPLLEGKYDFMIDDVYSLIDEADADVLIIDNLDLTIK DAIKIEIIDKADIDKDIHADYYFINRCDADFDPRFFKEKLLGKGATYLGFVKENEYFKKV IDNLLKGQAEPIGDLGLVEKIMRVFKK >gi|229269855|gb|GG666056.1| GENE 32 28359 - 29246 711 295 aa, chain + ## HITS:1 COG:TM1606 KEGG:ns NR:ns ## COG: TM1606 COG1530 # Protein_GI_number: 15644354 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Thermotoga maritima # 51 291 130 370 454 74 28.0 2e-13 MRVENERVMEVIFYDSLLHNIYRGKIENKIDSLKAYFVKISENESLFLKSTLAYNIGDNV IIQYVREPANGKLGLASENFSLENEAYTLTRYPLKKRPRLKKGKDKDETLYKEILAEKER LINEEKFFPSPKLLVENSSRDFYLASYRDYKIRDFDVRNSREFSNLKEELKKSELGYKDL SIIIDELKTLTVIDVNTAKRKSKLNKKDFLLNVNLELIDFIVYNLKLRNIGGMVVIDFLR TDGKEELREAFEDAARKYKLEAEVFGFSQMGLFEISIKRRGDSLKAKLEKRNLLF >gi|229269855|gb|GG666056.1| GENE 33 29235 - 29489 294 84 aa, chain - ## HITS:1 COG:VNG2274C KEGG:ns NR:ns ## COG: VNG2274C COG2827 # Protein_GI_number: 15791086 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease containing a URI domain # Organism: Halobacterium sp. NRC-1 # 1 76 1 76 77 85 56.0 2e-17 MHFVYIVRCEDGSLYTGYTTDVKERLITHNSGKGAKYTRSRLPVSLVYYKRVDSKSMGLR LEARIKKLTKKEKEALVKAFNLEK >gi|229269855|gb|GG666056.1| GENE 34 29489 - 30094 757 201 aa, chain - ## HITS:1 COG:BH0924 KEGG:ns NR:ns ## COG: BH0924 COG2137 # Protein_GI_number: 15613487 # Func_class: R General function prediction only # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 24 196 31 206 266 68 28.0 1e-11 MIIENIEYSDKYNLIRLTISKERFYVDYDLYYENGFELEKEIDFPIYKKILANDEFNRAK NFALNKISFSQKSTYEIRQKLKDQKFSADVIEKIISYLDSYGFLDDEAYVKAYIRDKDEI SSWSRGKIKYMLRQKHIDENLIEDNLCLISDEREAEKAGFFADKKVKNDYSYENRAKVFR HLAGKGFDIDIINQVLNERFS >gi|229269855|gb|GG666056.1| GENE 35 30659 - 31108 787 149 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227484633|ref|ZP_03914949.1| ## NR: gi|227484633|ref|ZP_03914949.1| hypothetical protein HMPREF0072_0036 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0036 [Anaerococcus lactolyticus ATCC 51172] # 1 149 1 149 149 190 100.0 3e-47 MKKVLIVLLTAGILTACGGKSTTTDNKVKTPAIEEKAEKTEEKAVKPEKKDKDKLKEEAK SKIELTDLVVNDSDITPYITGLIKNKTDKEIEFVELEFAVKDKAGNKIDSAINTTAYLKP GETREFEAISLSFEKEQFIDLEDYEVDIK >gi|229269855|gb|GG666056.1| GENE 36 31614 - 32408 1284 264 aa, chain + ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 1 262 1 262 265 334 62.0 9e-92 MNDMKTCLTIAGSDSSGGAGIQADLKTMTVNGVYAMSVITALTAQNTQGVTGIVDVTPEF IRDQMDAVFTDIYPDAIKIGMVSSPEIVEAIARSLEKYDAKNIVLDPVMVATSGAKLLKE EAMDSLINRLIPLADVITPNIPEGEILSGMEIKNEDEMLKAAEVIGEKYACAVLLKGGHS INDANDLLYKDGKFKWYRTERINNPNTHGTGCTLSSAIAANLAKGNDLDEAIANAKDYLT GALRAGLDLGKGSGPLMHNYKILK >gi|229269855|gb|GG666056.1| GENE 37 32565 - 33953 1258 462 aa, chain + ## HITS:1 COG:PH0575 KEGG:ns NR:ns ## COG: PH0575 COG0534 # Protein_GI_number: 14590472 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Pyrococcus horikoshii # 6 459 23 468 472 208 30.0 2e-53 MKTDRRELILNGNIYMAIAIISIPIILNTFIQQLYSLADAFWLGKLGTAEFAATSFTWPV IFLFNSIGIGLSIAGISLISQLIGMDNIDLAQKYNDTIINISLLFSLVFMVVGYFTAEFI VGMMGASGDLYIYSVDYLKYSYFGIPFIFLYFIYAAVFQAQGKNTIPTIISTTCVILNMV LNPFFIFDTVPIFGFTGLGLGVKGAAIATVLTQALMCFLGFTHLRVNKDLIKLNYESLFY IRWDKHIVKKIYTIATPAVIGQMGTATGFIILNSFIQSYGTDTVAAYGMVNRITGLLNIP PAGVGSAITSIIGQNIGSGNVERAKETFKKASFVVIVMSILIAIVSFIYRYEILQFFIDA PLDSKLMVEANSYMYYTLITLLMLDMFFIYQGLFQGSGNSKYSMFIDVLRLWVIRIPLLF FFKYFTNLGATGIWIAMAVSNVMISIIAHIIYLRGNWIRGSF >gi|229269855|gb|GG666056.1| GENE 38 34040 - 34753 837 237 aa, chain + ## HITS:1 COG:CAC1789 KEGG:ns NR:ns ## COG: CAC1789 COG0528 # Protein_GI_number: 15895065 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Clostridium acetobutylicum # 1 235 1 236 236 275 59.0 6e-74 MQDIKRIILKLSGEALSGKTGFGFDDEMIDKICQNIKILTEKGIEVAIVVGGGNFWRGRS GTNIDRASSDNIGMLGTVMNGLRVQGTLEEIGLDTRLMTAISMKEVAEPYIRRRAIRHLE KGRVVIFSAGTGLPYFSTDTTASLRALEIGADVILLGKTGTDGIYDKDPNLFDDAKKFDK LTYKEILQKELKIMDTTATSLCMDNDMPLIVFGIDDPANMVRVFENENLGTRVKESF >gi|229269855|gb|GG666056.1| GENE 39 34755 - 35315 736 186 aa, chain + ## HITS:1 COG:BS_frr KEGG:ns NR:ns ## COG: BS_frr COG0233 # Protein_GI_number: 16078715 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Bacillus subtilis # 2 186 1 185 185 167 48.0 7e-42 MLYEQIKKETEVGMQKTVDSFEKRIATIKAGRATEAILDGITFSYYGTETPINQAATVSI PEARLLVIKPWDKNNIGPIEKAILKSNIGITPGNDGEIIRLPFPALTEDRRKEYTKEVNT YAEDAKIVVRNVRRDSMDEVKKSEKSGDITEDDRYKLEDEIQKVTDKFIKTIEEMTEKKN KELMNV >gi|229269855|gb|GG666056.1| GENE 40 35394 - 36416 893 340 aa, chain + ## HITS:1 COG:DR1863 KEGG:ns NR:ns ## COG: DR1863 COG1459 # Protein_GI_number: 15806863 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Deinococcus radiodurans # 1 337 68 404 406 150 28.0 3e-36 MSLFLKQLSLLLNSGISLYDSLNIINQQGTDKKVIKAISLVIAGLKKGLDPYESFCLANE YFSPLVLAFIKTGTKTGYLGKILRDLSDFIFEESKNKSTVKQAMTYPILVLVVSILVIIA LIKFVMPSFIEIFDKSEITLPLPTRILLFVSSFFSENYILILLFIFLLALIYLFLRTDYK KRVEIDRYIFRLWPLRDLNRLRVEYQLTSIYYILRRGDIDTINSFDILAESFKNTYVKET LKGIKNRVNKGESLSLAFKNAGIFSPLLISMVDIGTETSSLDESMKKANEYFANEYIFKI KKLAGLAEPVLIIIMGLLVAFVVFSVSIPMFDSINGLRGG >gi|229269855|gb|GG666056.1| GENE 41 36418 - 36804 494 128 aa, chain + ## HITS:1 COG:no KEGG:Mahau_1123 NR:ns ## KEGG: Mahau_1123 # Name: not_defined # Def: hypothetical protein # Organism: M.australiensis # Pathway: not_defined # 3 123 18 140 141 81 44.0 1e-14 MKKKRKAFTLIELIIVIAILGILAAIAIPKYNKSRLQAAETAHKANVEMLKSAARMKILD KDEPFNWPDDKTKDDKKGYVNYLDKWPVVPNGLKIEGNEYKVAYDGKEITVTLVETKKGE EPAKKDGE >gi|229269855|gb|GG666056.1| GENE 42 36839 - 37528 261 229 aa, chain + ## HITS:1 COG:slr1120 KEGG:ns NR:ns ## COG: slr1120 COG1989 # Protein_GI_number: 16329234 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Synechocystis # 2 105 16 118 269 68 38.0 7e-12 MLGSCLGSFISALVYRREKGISIISPPSFCDYCGKKILKRDLVPVFSFLFLRGKTRCCGQ IISIDKVLVEIIGGLVFVFTFKTYGLIEGTYLSAVLLLCLLISVTDYKFLEIYDTDLKVL IGLGFIYRFLVYGIDLKFILSCLIFVIGFKLLMVISKGGLGDGDLFFYLGLIFFLGNSQI PLLVLFSTWIGAAFAIAKAIRLRSLKGSIALCPAISLAFFLILVFRDYL >gi|229269855|gb|GG666056.1| GENE 43 37525 - 37947 516 140 aa, chain + ## HITS:1 COG:no KEGG:Apre_0651 NR:ns ## KEGG: Apre_0651 # Name: not_defined # Def: methylation site containing protein # Organism: A.prevotii # Pathway: not_defined # 1 107 1 116 149 62 34.0 8e-09 MKRNGFTLIELIIVIAIISIGFGVSILKFSIVDKIGARNEIRTFVDDYSYLRALALSTGD IHYIRFTSDGYEIDFNKKKDRDLKYIESLNVNKIEFYPNGYVNPKKTKEDHNLVFISKKD PNIKWHFTIQAVGGYLSEKD >gi|229269855|gb|GG666056.1| GENE 44 38027 - 38266 152 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484642|ref|ZP_03914958.1| ## NR: gi|227484642|ref|ZP_03914958.1| hypothetical protein HMPREF0072_0045 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0045 [Anaerococcus lactolyticus ATCC 51172] # 1 79 32 110 110 142 100.0 7e-33 MTNLSQSHQIKDLADTTFILQEAIELSRDKSIGTYTEEINGKNVEISVESFQYPSLKSTY KKIRASYGGKFFELIEADK >gi|229269855|gb|GG666056.1| GENE 45 38263 - 38733 359 156 aa, chain + ## HITS:1 COG:no KEGG:Apre_0653 NR:ns ## KEGG: Apre_0653 # Name: not_defined # Def: hypothetical protein # Organism: A.prevotii # Pathway: not_defined # 1 156 1 164 164 76 38.0 4e-13 MKKGFSLIELIISLAIISFLVLVLSNFFSFNINILNKSYKDENEYKEAYTAMAYIDKTIR MSHKIVAKLHFNSNFTGYIIGDDNPVSSYYFYTSDGFLYIYRANALVSSTGAPNRISECG LIDLNYDPTSKIIKVKLTSRKGTYKFETAIYVGDKL >gi|229269855|gb|GG666056.1| GENE 46 38730 - 39131 492 133 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484644|ref|ZP_03914960.1| ## NR: gi|227484644|ref|ZP_03914960.1| hypothetical protein HMPREF0072_0047 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0047 [Anaerococcus lactolyticus ATCC 51172] # 1 133 1 133 133 200 100.0 3e-50 MKKAFISIYVLLILLVCGLTISFIYKENETNYDVAKSMYAKKQAMYEAESFLNIIIEEKT LDDKLNIDDLLESLKPKSEIRARIEKAENLVEEAKGANLLIVTSFYKNVTAKAIIAYKLD EANKIKIIYKKVY >gi|229269855|gb|GG666056.1| GENE 47 39196 - 40389 1619 397 aa, chain + ## HITS:1 COG:TM0274 KEGG:ns NR:ns ## COG: TM0274 COG0282 # Protein_GI_number: 15643044 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Thermotoga maritima # 1 396 1 399 403 467 57.0 1e-131 MKVLVINCGSSSLKYQLFDMDNEEVMVKGLVERIGIEGSKLIQEEGDDKYIIEENMKDHT EAVSHVFDALVDKDHGVIADLSEIDAVGHRVVHGGEKITKSDLIDKEVRAAIVEYQKFAP LHNPANLMGLEACEKLLPNVKNVAVFDTAFHQTMPKRTFLYGIDYKYYEEDAIRKYGFHG TSHNFITNKTAEVLGKSVEDLNMISAHLGNGSSICAVKNGKSYDTSMGLTPLEGLVMGTR SGDIDPSAVTYIMRKENLSPEEMENILNKKSGVFGVSGVSSDFRDLESAAKEGNDRAQAA LDMFVTRVKRYIAGYMAEIGSCDAIVFTGGIGENSIKIREDIMAGFEQFGIKIDPEKNNV RGGCHVVSTDDSKVKVMVIATNEELMIARDTKSLVEA >gi|229269855|gb|GG666056.1| GENE 48 40454 - 40633 322 59 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227484646|ref|ZP_03914962.1| ribosomal protein L32 [Anaerococcus lactolyticus ATCC 51172] # 1 59 1 59 59 128 100 9e-29 MAVPKRRTSKTRKNKRRASAYTLNRSNYVECPNCHEMKLPHRVCPSCGEYKGVAVIDEQ >gi|229269855|gb|GG666056.1| GENE 49 40728 - 41705 1184 325 aa, chain + ## HITS:1 COG:CAC1746 KEGG:ns NR:ns ## COG: CAC1746 COG0416 # Protein_GI_number: 15895023 # Func_class: I Lipid transport and metabolism # Function: Fatty acid/phospholipid biosynthesis enzyme # Organism: Clostridium acetobutylicum # 1 325 1 329 331 236 43.0 4e-62 MKILIDTFGADEGSKVLVDGAILALKQKDFIPVFVGNESELEKLIDGKIKDYEIIHTDEY ISNDEDPVRAIRRKKNSSLVLAYNKLNEEGYDGLLSAGSTGGLLAGGIFISKRIDGIDRP SLAAPLPSIGAYTMLMDTGANMDCKPAYLAEFAIMGKVFLENVIHIKNPSIGLLNVGVES HKGNKLTKEAYELLSNSKLNFVGNVEARDLFTGKVNVIVADGFAGNIAIKSAEGVISLFK AQMKEVFYKSLKNKLAALAIKDDLAKQMGKFSSQNIGGVPLLGVKSYVYKAHGNSNAIAI SNAILGLIEYINMDVINKIQGELND >gi|229269855|gb|GG666056.1| GENE 50 41698 - 41922 430 74 aa, chain + ## HITS:1 COG:no KEGG:Apre_0658 NR:ns ## KEGG: Apre_0658 # Name: not_defined # Def: phosphopantetheine-binding # Organism: A.prevotii # Pathway: not_defined # 1 74 1 74 74 63 75.0 3e-09 MIREQLLKLAEENLDIDTSNLDFESKISDMDIDSIDLVDFIMVIEEEFDIEFTDEELDEI ETLSDIVSLIESKN >gi|229269855|gb|GG666056.1| GENE 51 41922 - 42635 881 237 aa, chain + ## HITS:1 COG:BB0705 KEGG:ns NR:ns ## COG: BB0705 COG0571 # Protein_GI_number: 15595050 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Borrelia burgdorferi # 3 236 11 243 246 164 38.0 1e-40 MSLSKDRLEKIEEFEKSIGYTFNDKTLIDVAFTHSSFTNEARIKTKSNERLEFLGDTILD MVVSEYLFKNYKEKPEGWLTRTRSRIVCTDSFAKACEKFDLTKYLRFGMGEKKQGGKLKK HVKADTFEAFCAAIYLDSSYQRLFEFLKSNYSEEVLQIINDDSLFLDYKTRLQEYYNAHS KKNLSYELIKEVGPEHDKTFTMEVRLGNRALAQGEGKNKKTAEQMAAKAAYEIIKND >gi|229269855|gb|GG666056.1| GENE 52 42628 - 43698 1043 356 aa, chain + ## HITS:1 COG:CAC1749 KEGG:ns NR:ns ## COG: CAC1749 COG1243 # Protein_GI_number: 15895026 # Func_class: K Transcription; B Chromatin structure and dynamics # Function: Histone acetyltransferase # Organism: Clostridium acetobutylicum # 5 311 7 309 358 270 49.0 2e-72 MTRQIIPIFIPFLGCPHDCAFCNQVKITNYKDMADENSIIKQIEDYLTYFKDKKTAKEIA FYGGSFTGLPYETMVSYLKIAGIYKKKGIIDRIRLSTRPDYINNFILDTLKAYEVDTIEL GIQSFDDEVLAANERGHSALDSKRASKLIKDYGFKLGHQIMPGLYKDKMEKIIKTALESA KIKPDIARIYPTLVIKDTKLEKFYKDGLYQPLSLEEAVEISAEILMIFAYKDINVIRIGL QPTENINEGRDVVAGPFHAAMRQLVESYIYRLYLEEVIKKENVSGDALIHAKAKDISLIA GNKKSNKKYFYDKARIKIAFVGDEDFYLESDNRKITLDLKGFIKAYVKKKYGGDLN >gi|229269855|gb|GG666056.1| GENE 53 43874 - 47206 3401 1110 aa, chain + ## HITS:1 COG:SA1077 KEGG:ns NR:ns ## COG: SA1077 COG1196 # Protein_GI_number: 15926817 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Staphylococcus aureus N315 # 1 1105 62 1175 1188 370 28.0 1e-102 MKDVIFTGAKSAMNIAEVSLNFSNEDKKLDIPYDKVAITRRIYRSGENEYKINDKRVRLK DVRELFLDTGVGKEGYSIIGQGRIDEIILSSPKDRRAIFEEASGISKHKYRRDEAGKKLE SVNNDLDLIEKELEYKEKDYKLLKTYKENYLKHKDLTNEINRKAFFYLKNKSYDLIKKRD NLKIELGDLDEKITSLESQNTVIKEKLSPFRKDYDLDKQRLEKLLASLSSYEKNIEKAIS SLKLNDQKLDYDQKDRERISEILENLESNFIKAGNDLEEKQNNLLSLGQTISEIEKELAV KKEARIRLEEEIKILNEEISQQENAYEAIKTQILDYQVFEKSKAIIDEKRKKDLEEKRLK IARLDAEIKELNTEFEKSKASEEALSSEILEEEDNIRKLAGAINLDTEEINKLAASLNNL KLDLKSLLSDYKIEKNLLENNQGYFYPVQDFLKKTKINGLAGFYLDTLANLISVKTGYEE IIDNLIGAGLQNIVTRSKEDTRELINFVNREKLGRLTFLPIDSINSAVKEKPSEPEVIAM AYELVSYDEKLKGIVGHFLGSTVVVKDIDAAISLSKKIKGYRIISLNLDIINTWGSMVAG TNKNKRSTTNLLNRKKKLVDLENSIKNLNQKQGSLEVKISEVNLDLEKKKASLIALRDTY EKKSEVKKDLVNSLERLKLKIESLSQQRIDLNGGDVDYEDRESSVDIDKLKAEEEELIKI LGQKNKDLDEKTEAFNLLKEELITLTNKMEISLRDKSLEENSLANIKNSLEDIRSNKKIQ EKLLANLENDLDLSKQKAEELNKSIALYQEETQNLRLVIDELKESLKKREGENIKLIEEN QKFEDELKNLDIERVKLSYKLDNANETYKNLEDEVGPYITMSLDDLKEKFKEEEKISPTK SDLINIQKKINEVGFFTETAVEDFDTVDKEVNFIKEQVSDLKNSKADIEKMIVRLEKEMK DEFSRNFAVINKNFTKIFKILFMGGDARLILDSEDFLTAGVEIEAKPPSKSLKSISLLSG GEKALTAVALLFAIFEQNPAPFSILDEIDAALDEANIKRYIEYLKGLSDNTQFIMITHRQ TTMQLAEKIHGVTIDDEGMSKLYSIGFVEN >gi|229269855|gb|GG666056.1| GENE 54 47292 - 47777 636 161 aa, chain + ## HITS:1 COG:CAC1722 KEGG:ns NR:ns ## COG: CAC1722 COG0242 # Protein_GI_number: 15894999 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Clostridium acetobutylicum # 1 149 1 146 150 151 56.0 6e-37 MAIRNIRIDGDPILRKISRPVEDVTDRIRILLDDMAETMYAADGVGLAAPQVGNLRRVIV VDPRDGEDSLVKLVNPEILEMDGEQIGVEGCLSIPDFNATVKRPEHVKVKYLDENGEEKI WDAHGFPAVILCHEIDHLNGILFKDKYIEEYKPEEMVENND >gi|229269855|gb|GG666056.1| GENE 55 47770 - 48705 1089 311 aa, chain + ## HITS:1 COG:CAC1723 KEGG:ns NR:ns ## COG: CAC1723 COG0223 # Protein_GI_number: 15895000 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Clostridium acetobutylicum # 1 309 1 310 310 186 36.0 5e-47 MINICFMGNPKFALQTLDILYRDENINLKLVVSGKDKKRSRNKFSPTPVKKYAEDNGIRV ETPDSVNTEEFLDLLKDLEIDYIVVVAFGQLIKKIILDGFKDRIINLHPSLLPLYRGASP MQFTLLNGDKKTAATVMLIEKGMDSGDILIQREMDVDPSDDYFDLEDKLGKIGAEAIRDA ILNFDEVYENRLDQDDEKATYCTKIDKEMGKIDWNKSSREILDQIRALVGFPVAYFDYKG ENVKVHKASLADKKGQAGEILAANKKDKLIIGTSDGSIRIEKIQFPGKKAMDTTSFLLGN DVEVGFVLENE >gi|229269855|gb|GG666056.1| GENE 56 48698 - 49984 1055 428 aa, chain + ## HITS:1 COG:CAC1725 KEGG:ns NR:ns ## COG: CAC1725 COG0144 # Protein_GI_number: 15895002 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA and rRNA cytosine-C5-methylases # Organism: Clostridium acetobutylicum # 2 425 3 439 441 239 37.0 5e-63 MNDLAIIFNILRRVIYEDEKSSDMINSYAAKASNLSLITKTVYGVLENKIYIDYMIRKLS DVRLKKIHKHVLLILEIGIYNIHFLETKDYATVDKLVDLTKEKNKRSTGFVNAILRSFIR DEKEIAKIYETDDIKSLSIRYSFPEEITKYIYDFYGMDYTKAYLRDAGRIRDLAIRVNTL KISREDLKKLLIKAGFEIEDGKISPNSLLVKNPAGLASCEAFKDGLFTIQQEASMKVVEV LNPKENSKILDLCAAPGTKTTYLAEFTKNTGKIIANDISKAKNKLILENIQRLALENISL TNYDASTFVSAFENEFDFCLVDAPCSGLGVVGRKPEIRYNRNKETIVRLADLQKDILVNA IKYVKKGGYLVYSTCTLGPLENRNNFKFLMDNKDLELIQIDGQDFIEYKSFEANTDGFFI SKFRKIND >gi|229269855|gb|GG666056.1| GENE 57 49977 - 50999 1093 340 aa, chain + ## HITS:1 COG:CAC1726 KEGG:ns NR:ns ## COG: CAC1726 COG0820 # Protein_GI_number: 15895003 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Clostridium acetobutylicum # 1 338 1 338 345 281 44.0 2e-75 MININDKTIYEIENLFKERSYQKFRAKQVFRAIHVNRLNDFDEMTDLPLKMREDLKADFK FERIKVLKTFESKIDSTKKYLLELPDKNIVEAVYMDYKDRSTICISSQVGCRMGCSFCAS TKNGLVRNMTASELIEEVYLLERLNGPISNIVIMGIGEPLDNFDHIKKFIEIITDPSGRN LSHRSITLSTSGLSPRIKDLADTGLDVNLALSLHYADDKKRAVYMPVAKKYSIKDLIDAT DYYFDKTGRRVSFEYVVIDGVNNLTEDVENLRDLLFGKNVHINLIPLNPIEEFNHKKPGA RVLEDFKQRLIKRGLNATIRRSMGIDIDASCGQLRNNYAR >gi|229269855|gb|GG666056.1| GENE 58 51002 - 51727 748 241 aa, chain + ## HITS:1 COG:BH2505 KEGG:ns NR:ns ## COG: BH2505 COG0631 # Protein_GI_number: 15615068 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Bacillus halodurans # 1 239 1 239 249 150 35.0 3e-36 MKFSTITNIGKIRNENEDSFSNISLGDLDFFIVADGMGGHSKGELASKLAAKLFIKYIKE ADIASYNSYIKLLEEAIFYANEEIYKLSLEDGNIRMGTTVVCLCIDYKNKTYYLSHLGDS RAYIYRNETLSQLTRDHSLVNDLLDSGSLTEDEAANFINKSAITRAVGTEEKVVADSKSL PMEDGDIILMVTDGLTNELTDEKIRQIVKANKDPYQISSKLIEEAIDHGGRDNITVTTIL L >gi|229269855|gb|GG666056.1| GENE 59 51737 - 53668 2029 643 aa, chain + ## HITS:1 COG:BH2504_1 KEGG:ns NR:ns ## COG: BH2504_1 COG0515 # Protein_GI_number: 15615067 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Bacillus halodurans # 6 316 6 320 343 268 46.0 3e-71 MDKIILDGRYEIIKEIGVGGMAKVYKAKDKLLGRFVAIKILKEQYAEDEEFSKKFNNEAQ SAARLSHINIVNVYDIGKDMLNGKLIQYIVMEYVEGETLKDLINREKVLENHDIIDYSTQ IAQALKSAHDSGIVHRDIKPQNILIDKYGLCKVTDFGIARVSSNATITYTSSILGTVHYI SPEQAKGKIVDLKSDLYSLGAVMYEMATGRVPFDADNSVGIAVMHIQDDPIPPREINPNL SRHLNYIIMKLLKKDPTERFQNASELIEALDDESLVKGEDSYEDTARIPIVVPKKETYPD PIEEEREAVYVSTGEEKSKKKKKRNPIKIWPLALLAFILVVAVYFFSSRMNKEDLEVPTV VNLTEEQAVNQLEKRGFRANISRYAESDEYEKGKVMSQDPEASIRAKKGTIVNLVISSGR EIKVPELKNMNLSQAEETLKDLGLKVGTTSTDYSNTVDKDLVIRQEPVAGSTVQSGTEVN LVISVGKEDTTENIKVGNYIGMAEQDAIAAARKNHLRVRNVDYQHSSNIQKGLVMSQSIG AETEVAENSAIDFVISLGEEEKAKSPNREVEIRLNVASNKDNFNVKIYKVDSNGNRGDLL YNDYHTSSDLNSNGVLVLKFMAMSQTSVEVLVDDESYGVYQVN >gi|229269855|gb|GG666056.1| GENE 60 53668 - 54537 764 289 aa, chain + ## HITS:1 COG:SA1064 KEGG:ns NR:ns ## COG: SA1064 COG1162 # Protein_GI_number: 15926804 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Staphylococcus aureus N315 # 3 286 4 289 291 205 41.0 7e-53 MIGKIIKSQKELYYVDTNDMVYKAKARGNFRVKDKKPLVGDNVEIEILEDDKAYITKLLA RKNEIKRPNIANIDQLLVFITINDPPLNLYNLDKYLAMCEYLNISVTIMLTKIDLAPCEK VEEISGIYKNIGYEVILIDNYKDFPQEKIREILKGKTSAVSGASGVGKSTFLSNLIDAEI EIGDISQKSKRGKNTTRHTEIFKLAKDTFIFDTPGFDSFDLDFLEDENDLKNNFVELRDR DCKFKDCNHINEPSCRVKEDLEKGKISASRYKNYIQLFEELKQRRLNKW >gi|229269855|gb|GG666056.1| GENE 61 54531 - 55190 795 219 aa, chain + ## HITS:1 COG:lin1932 KEGG:ns NR:ns ## COG: lin1932 COG0036 # Protein_GI_number: 16800998 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Listeria innocua # 1 201 1 201 218 175 43.0 5e-44 MVRLSPSILSANFANLQGDLDQTKGCGLKMIHIDVMDGIFVPNISFAFKVISDIRDKNDY FFDTHLMIEEPIRYIDEFKKAGSDRITVHYEACKDLKATLKAIRDAGMEVGLTAKPETDP KLLLKYFDQIDLILVMSVRPGFGGQKFMEETKATMDLYRKYIDENNLKVKMQVDGGIKTT NVREVLDLGVDEVVSGSDIFAKDIKSQILTYHEIFKEYE >gi|229269855|gb|GG666056.1| GENE 62 55305 - 55493 326 62 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227484660|ref|ZP_03914976.1| possible ribosomal protein L28 [Anaerococcus lactolyticus ATCC 51172] # 1 62 1 62 62 130 100 3e-29 MSRACDICGKGTASGKTVTFSHRQINRTFKANVHKIKAIVDGTPKTINACTKCIKSGKVE KA >gi|229269855|gb|GG666056.1| GENE 63 55631 - 56533 985 300 aa, chain + ## HITS:1 COG:SP1390 KEGG:ns NR:ns ## COG: SP1390 COG0812 # Protein_GI_number: 15901244 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Streptococcus pneumoniae TIGR4 # 14 299 15 299 316 228 43.0 1e-59 MDYKSLYNNKKFTNIDFDKDLNTYTTFGIGGPADVLAKPTSVEELEELLKFNHENNIKTF VMGKGSNLLVSDKGIRGCVIVLADNFDDVKIEGNYLTALSGTSLNKASLAAIDEGLAGME EISGIPGSVGGAVSMNAGAYGGEIKDIAVEIKAFDFEGKLHTFKNEEMSFSYRHSRIFDD NLIVVSAKFKLEKGDKHIITEKYLDYTNRRQTKQPLDKKSAGSTFKRPEGSYASKLIDEC GLRGFREGDCQVSEKHCGFIINRDKATCKQMLDFINHVSSIVKEETGFVLEREVKLVGDL >gi|229269855|gb|GG666056.1| GENE 64 56534 - 57382 702 282 aa, chain + ## HITS:1 COG:CAC0511 KEGG:ns NR:ns ## COG: CAC0511 COG1660 # Protein_GI_number: 15893802 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Clostridium acetobutylicum # 1 278 1 282 294 234 41.0 2e-61 MKLKIITGLSGSGKTTALRAYEDLGYYAMDNAPAYLVEKFIELNKYQEKPIEKMAVVIDF RSFSLDNDIFKSIKSLKEANKDTEIIFIYCNDEIIQKRYNELRRPHPLGEYGNVSDGLEK EKNLLKPLRDISDKLIDTTNYKIAELRQVIESSGDKKNNIIINLISFGYKYGVSADFDFV FDVRFIPNPFYVEELKKLNGTNKKLANYLDQFDIIKDFEDRVYGLINSLLPSYEKEGKNI ITIAFGCTGGQHRSVYMVEKMYEKMKDDDYILIKRHREKDKW >gi|229269855|gb|GG666056.1| GENE 65 57384 - 58100 710 238 aa, chain + ## HITS:1 COG:lin2049 KEGG:ns NR:ns ## COG: lin2049 COG2365 # Protein_GI_number: 16801115 # Func_class: T Signal transduction mechanisms # Function: Protein tyrosine/serine phosphatase # Organism: Listeria innocua # 7 219 78 306 326 83 28.0 4e-16 MRYLKRLDIDNIKNARDLGGVPTLDHRSTKWHEFFRTASLDDINDADMEQLKKLNVSTII DLRRINEIDFESESHKKIKENFDYHHISLAPDREFRKEEIEKIISGKISVGQSYRNLIDH YVAVKEIVEVLARAEGSVLYHCQEGKDRTGIVSMIIMGLADVARGDIIADYEISSAHLGY IERYDEDEPFSVFRITDPYYMKEAYDYVIRKYGSFEAYLLYAKCEQKDIYMLRSRIRE >gi|229269855|gb|GG666056.1| GENE 66 58102 - 59004 933 300 aa, chain + ## HITS:1 COG:CAC0513 KEGG:ns NR:ns ## COG: CAC0513 COG1481 # Protein_GI_number: 15893804 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 300 1 312 317 151 33.0 2e-36 MSFSQRCKKELLRKDPLDLEGELISLVHFIGSIRISASGFNVIFKTDANQEARYIYKLIA DLYGYSPTFEIQDNPDKKTKRDYVVIIEDADVSDKLIALMNEGFIENYKNIEDVKLETIK GFLKIAFIFRGSVNDPQRGYNLEIVGKNKNEAGLIKDSMDTFNLNAKLSQRLDNNIIYLK DSDKISDFLAVIGAMQSLFELENVRAMKSIRNDINRINNFDNANIDRTVKASIVQVDAIN KVIEKNAFDEFDELSQKIAKLRLDNPYLSLDELGEKLNPPLTKAKVNYRLQKFIKLAKDL >gi|229269855|gb|GG666056.1| GENE 67 59033 - 62479 3514 1148 aa, chain + ## HITS:1 COG:CAC0516 KEGG:ns NR:ns ## COG: CAC0516 COG0587 # Protein_GI_number: 15893807 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Clostridium acetobutylicum # 5 1147 11 1166 1167 1056 49.0 0 MTTKFTHLHLHTEYSLLDGFTRIDELLDRCKELGMDSVAITDHGQMYGVIEFYKQAQKRG IKPIIGCEVYVSERDHKIKDPTNRRYYHLILLAENNTGYKNLVKIVSEAYVNGFYYKPRV SFDFIKNHTEGLIALSACLNGEVNQRILEGDMGGAEETALKYEKAFGKGSFFLEVQDHGM AEQKKVNQGIKYLHKKLGIEMVATNDVHYINKEDSYYQDVLLCIQTGALIKDENRMRMPT REFYLKDADTMATIFKDYERAIENTRKIADRCQVEIKFHQPHLPYYTKVPEGLTNLDYLK LLVNDGLAQKYDQVTDEIVKRAKMEIDVINSMGYVDYFLIVWDFVNYARKNDIAVGPGRG SAAGSLVSYALDITQIDPLKYNLIFERFLNPERVSMPDIDIDFDYVLRDKVVEYVNDLYG RDHVSQIVTFGRMQARNAIRDVGRVLDIAYGKVDTIAKQIPATIGMTIDKALVESDAFRA SYEKDAEGKRLIDTAKKLEALPRHTSIHAAGVVISKDPLTDIIPLALSNDQVVSQFDMTE IEELGLLKMDFLGLRNLTVIKDTIKDIKKNYGVDLDIRKIDVNDVNVIKQFNQAKTIGLF QFESAGMRAFLKNLKPTVFDDLIAANSLFRPGPMDEIPKYIHNKNNPDDVTFLDEKLKPI LGVTYGIIVYQEQVMQIVQQLAGYSLGEADNLRRAMSKKKMAVMEENRDVFINGKVGEDG KVIIPGAVRNGVDRQVANTIYDEMISFAKYAFNKSHSAAYSLVAVQTAYLKHYYPEEYMA NLISSVMDQSGKLYSYVSETKRLGIEVLAPDINKSYGSFKVADKKIIFGLSGIKNVGLNL IDSIVKARDEGGAFTNFKNFLERVEDYDPRALNKKGIESLIKAGAFDSLGYTRSSLMAIF EKAINTVHDNNKINVTGQINLLDMASAKEDTDIDMPNIDEYPKKVKLKLEKEVLGFYISE HPLSERSLALSNIVNFTTNYREELGENRLASLDGKFVTMAGIINNKKELTTKKRDLMAFA SLEDMYGNIEMVIFPKTYSEYRKLIDDDNVVIVKGRLQTDESDVKLLASEFIDLDNANLK TLYLKIKYREYNNIKCLLMENLGKNPVKIYFEDKKKLVGLDSRLWFNINDQTIKLLEDRL GKENVKVK >gi|229269855|gb|GG666056.1| GENE 68 62489 - 63448 1213 319 aa, chain + ## HITS:1 COG:CAC0517 KEGG:ns NR:ns ## COG: CAC0517 COG0205 # Protein_GI_number: 15893808 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Clostridium acetobutylicum # 1 319 1 319 319 355 58.0 5e-98 MKTIGILTSGGDAPGMNSAIRGAVRTALNKSMRIKGVRNGYDGLMKGDIYEMNISSVADI IHKGGTILGTARSLEFQTPEGQKRGAQILADYGIEGLIVIGGDGSFKGAKALSDLGIKTI GIPGTIDNDMGYTDYTIGFFTAIETVSDAIGKLRDTSSSHGRAVVIEVMGRNCGDLALYS GLAGGAESIIVPEHKFSINEIIAKMEHGRKRGKLHHLITLAEGVGDPYALANELEEKTGI ETKVTVLGHVQRGGSPSAVDRLLGSAMGSRAVDLLAEEKTGLAIGYVNGKIIEVSIEEAT SVKSVFDENLYDLANSLSR >gi|229269855|gb|GG666056.1| GENE 69 63457 - 65229 2344 590 aa, chain + ## HITS:1 COG:BH3163_1 KEGG:ns NR:ns ## COG: BH3163_1 COG0469 # Protein_GI_number: 15615725 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Bacillus halodurans # 6 479 1 473 473 482 54.0 1e-136 MQPEILKKTKIVCTIGPASEKPEVLEQLIHNGMNVARLNFSHGTHEEHLEKIKTIKRLRR KLNKPIAIMLDTKGPEIRTGNYNVKEIYLKPDDIFTLTTRDVMGTQDIVSVSHKGLPQDV KVGSEIYIDDGLVQLEVIEIKDGTDVVCRVQNNGVLSNHKGVNLPGSKTNLPAITPKDVD DIKFGIENGIDLIAASFVRKKEDVYDIRKVLEDHGGENIKIISKIESQEGVDNIEEIIEA SDGIMVARGDLGIEIKTELIPGVQKDIIRRCNAAAKPVITATQMLDSMIRNPRPTRAETT DVANAIIDGTDCVMLSGETAGGKYPVQAVKTMRDICITTELSDDFIEKVYNTKVVSRRNT TNSIARSTCQIARELDAKAIISCTSSGNTSRVISKFRPRTTIVAATTTESVARQLSIVWG VYPLVIKEAHETDELIERAIVGGLSEGYLEEGDLTIVTAGVPLGVSGSSNLIKVHVIGDI ITSGTGIGAKSVSGKVVIGSTKKELESKFEEGDIIVAKFTDSDITEFIEKASAIVTETGG LTSHTAVAAVHFGIPAVVGAVSAQSLVEDGQIITVDPIGGVIYNGETKVI >gi|229269855|gb|GG666056.1| GENE 70 65229 - 66482 1385 417 aa, chain + ## HITS:1 COG:BS_yefA KEGG:ns NR:ns ## COG: BS_yefA COG2265 # Protein_GI_number: 16077741 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Bacillus subtilis # 2 413 11 456 459 198 30.0 2e-50 MKYNDIYIRDILIDGRGVGETPDKVAFIEDAVYGEVCEIEIIEEKKNFYNAKKIKTIKES PVQTQAPCPYFYECGACTIMDIKYENQIQIKKNLILSALAKSTSYKLEDIEIIPSKELRY RNKIRLQVEKDGRLAYNKSYSNDLVYIKDCLLVRENIGENLGKIEEITKDISEKFKGAIK EITVRTNGTDIMLNLDLDNNNEPIAYIKEKYSSSKFFINIIGKENINISGKDFLEYKICD KTFRISGNDFYQVNDFQIENLYGQAKKLLGSGKKVLDLYCGSATSSIAINGDRLVGVEIN KNAIQDAKINAEINDLKDFKFIAKNAKYIDEKFIKKEKIDSLIVDPPRAGLDKDLIKSIG KSGLKEIIYISCNPQTLARDINRFEKEGYKLEKIKAVDMFPQTMHVECIALIQRVKS >gi|229269855|gb|GG666056.1| GENE 71 66641 - 66925 147 94 aa, chain + ## HITS:1 COG:no KEGG:SZO_12680 NR:ns ## KEGG: SZO_12680 # Name: not_defined # Def: membrane protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 2 93 1 92 93 107 93.0 2e-22 MMRWIIKIILFPISLALSILTAFLTFLLGIGTALLYLLMMFCIFGAIASFLQKEVTIGIE ALILGFLLSPYGIPMVGATVIAFLQGINEAIKST >gi|229269855|gb|GG666056.1| GENE 72 67015 - 67785 533 256 aa, chain + ## HITS:1 COG:no KEGG:SZO_12980 NR:ns ## KEGG: SZO_12980 # Name: not_defined # Def: replication initiation protein # Organism: S.equi_zooepidemicus # Pathway: not_defined # 1 256 26 284 284 425 89.0 1e-118 MNFDYFYNREAERFNFLKVPEILVDGEEFKGLSAEAIILYSMLLKRTGMSFKNNWVDKEG RVFIYFTVEEIMRRRNISKPTAIKTLDELDSKKGIGLIERVRLGLGKPNVIYVKDFMSII AVKENDFQKSKNLTSEVKDFNLRSKENELQEVQNVDSNYIENNKSKYSKREYSFGKSGLG TFQNVFLKDEDIGELQIKMAGELDNYIERLSTYLQSTGKTYKDHKATILSWFYKDQGSKK KTNIPTWEEYNKGVHL >gi|229269855|gb|GG666056.1| GENE 73 67782 - 68633 643 283 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 41 276 36 277 282 108 31.0 1e-23 MIKELEKVMIEDVEYSFDPEKEYIKDGHAYCKVCHERKDGKALEFFGKQMIFKTACKCDR DREAKEKERQKQLEIERLKSICFTSMIQWAYTFENYEGKENQSLIIAKNFVKDYELMRKE NIGLLFYGSVGSGKTYLACSIANALIEQYQISVKIRNFAQIINELQKGGFDLDKNAYIES LVNTSVLILDDLGIERDTSYAKEQVYNIVNNRYLKHKPTIFTTNLSYSQIENCTESVEYQ RIYSRIIEMCIPVMVLGEDYRKVIQEEKLKRNKERLLTGGERT >gi|229269855|gb|GG666056.1| GENE 74 68666 - 69115 342 149 aa, chain + ## HITS:1 COG:no KEGG:SEQ_0732 NR:ns ## KEGG: SEQ_0732 # Name: not_defined # Def: hypothetical protein # Organism: S.equi_equi # Pathway: not_defined # 1 149 13 161 161 149 96.0 4e-35 MEVKAAKVTGKLILNLLKKLMKEAEKLGGLEKLVNANGNEVKLKDMVKKGQLEEIPVEEA ELKELKKELNRYGVKFSVMKDKESGKYSVFFQAKDMKVMDKAFKHALAESEKKTERKESI HKNIEKFKEMAKNTVSKDKVKNKQKEQSL >gi|229269855|gb|GG666056.1| GENE 75 69112 - 70155 551 347 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 150 328 157 326 591 109 34.0 8e-24 MIDKILKDIKGLFKVQDKAKLLKQNIPYLAFFYVGNIFSHHVRAYTGGDVIDKIFQGILE LNTMSFIPSIHPSDILMGVGVAALIKFIVYTKGKNAKKFRQGKEYGSARWGTRKDIEPYV DEKFQNNILLTQTERLTMNGRPANPKYARNKNVLVIGGSGSGKTRFYVKPNLMQMHSSYC VTDPKGTIVIECGKMLEDNGYEIKILNTINFKKSMKYNPFAYLRSEKDILKLVQTIIANT KGEGEKAGEDFWVKAEKLYYTALIGYIFYEAPREEKNFATLLDMIDASEVREDDETYMNP IDRLFEALEKKEPTHFAVKQYKKYKLAAGVIELRRTLNHYFSEICTS >gi|229269855|gb|GG666056.1| GENE 76 70195 - 72033 1506 612 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 5 299 6 301 301 321 56.0 2e-87 MRNFEKITALYERLSRDDELQGESNSIINQKKILEEYASKNNLSNIIHFTDDGISGTQFD RPGFMAMMNGVNQGNIGCIIVKDMSRLGRDYLKVGQCMEILRQKGVRLIAINDNVDSFYR EDDFTPFRNIMNEWYARDTSRKIQSTFRSKGESGKHTASTPPYGYIKDEKDKNKWIVDEK AAEIVRRIFNLTMQGNGPYRIAKILESEKVDIPAYHQQKLGYGLYQSKNFEHPYRWCSST IASILKKQEYLGHTVNFKTRKHFKDKKSKYVSEDNWLIFENTHEPIIDQETFDNVQRIRG NVKRYPDGWGEYHPLTGLMYCADCGSKMYVHRTSNYKNIPYYTCSAYTKTPCGMLCPSAH RIKAEVVLNLIQDTLKDIKKYLDEDNEAFICSIQNEMEEKEKIEIEKKKVRLTESQNRLR ELERLMCRIYEDMILNKIPNSRYEILNNQYETEQITLSKEIKDLEQQVSRYEKETDRARK FISLISRYENFDELTTTMINEFVEKIIVHERDRKGSQTSKQKIEIYFNFIGNYELPQAEL SEEKKQKLEKEERKIEERKDKLHQNYLKRKASGKQKEYEDKYKPRREQKKQEKIKVLKRV GIPVSEYIKTNI >gi|229269855|gb|GG666056.1| GENE 77 72109 - 72681 553 190 aa, chain + ## HITS:1 COG:FN0473 KEGG:ns NR:ns ## COG: FN0473 COG1309 # Protein_GI_number: 19703808 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Fusobacterium nucleatum # 1 190 1 189 189 161 50.0 7e-40 MAQVLKEEVRNRILEAAEKVFYKKDYRGAKLTEIAKEADIPVALIYTYFKNKAVLFDAVV SSVYINFESAFNEEESLEKGSASERFDEVGENYIHELLKDRKKLIILMDKSSGTKHTEAK QKLISQMQVHIEVSLKRQSKQEYDPMLAHILASNFTEGLLEIARHYQSEKWAKDMLKLIA KCYYKGVESL >gi|229269855|gb|GG666056.1| GENE 78 72732 - 73250 316 172 aa, chain + ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 172 172 257 82.0 8e-69 MKIYKDKEELKSEINKSFEKYISEFDIIPESLKDKRVPEVDRTPAENLAYQLGWTTLVLK WEKDEKNGFEVKTPSDMFKWNQLGELYQWFTDTYAHLSIEELKKRLKENIISIYTMIDTL SEEELFQPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL >gi|229269855|gb|GG666056.1| GENE 79 73391 - 75130 185 579 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 346 549 40 249 329 75 26 7e-13 MPEKELRKKVIGKNSLSNSLLALKIVFDLIPQILLVYLISSLITNNINEGNLKYIFLGIF ISFVLKGVFYYFATKVAHEKAYEKLTELRLDIIGHLKKLSLGFFKEHNTGELTNIVQHDV EQVEVYLAHGLPEIMAVTLLPTIIFVAMIFVDWRLALGMIAGVPLMYLVKVLSQKTMDKN FAIYFNHENKMREELMEYVKNISVIKAFAKEEEISERTLKTAREYIYWVKKSMGAITIPM GLIDIFMEIGVVIVMILGSIFLYYGNITTPNFILAIILSSAFTASISKTATLQHFSIVFK EALKAIGKVLTVPLPKKKTEQGLEFGNIEFKDVNFAYGKDSFELKNINLNFKKNSLNAFV GASGCGKSTVSNLLMGFWDADEGQILINGKDIKEYSQENISMLIGSVQQEVILFDLSIFE NIAIGKLNATKEEVIEAAKKARCHDFISALPNGYETRVGEMGVKLSGGEKQRISIARMIL KNAPILILDEAMAAVDSENERLIGEAIDDLSKDKTIITIAHHLNTIRDSDQIIVMDKGVV LDAGSHEELMKRCEFYKDMVEAQNKVDRWNLKEVVTENV >gi|229269855|gb|GG666056.1| GENE 80 75123 - 76832 191 569 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 347 545 38 242 329 78 30 1e-13 MFREMLKLLTKTGKRDLIISSVFFALYGLSSIAMIVIVFSILFQIFDGTSLASLYKGFIA IGLLVVFKGICNMVADMKKHSAGFDIVQQIRERMIIKLKKFSLGFYTNERLGEINTILHK DVDNMSLVVGHMWSRMFGDFLIGAVVFIGLASIDFKLAILMAVSVPIALVFLYLTIKQSE RIENQNNSALLDMVSLFVEYVRGIPVLKSFSNNKSLDNELMNKTKKFGETSKVASRFKAK QLSIFGFLLDIGYLVLLIAGAILVIKGSLDVLNFIIFAVISKEFYKPFASMEQHYMNYVS AVDSYERLSRILYADVIPDKVNGIVPMDNDIAFENIDFSYEKDEFKMEKLSFSIAEKTMT ALVGESGSGKTTITNLLLRFYDVHKGKITLGGTDIRDIPYDELLDRISIVMQNVQLFDNT IEENIKVGKKGATKEEIIEAAKKARIHDFIMSLPKGYETDIGENGGILSGGQRQRISIAR AFLKDAPILILDEMTSNVDPVNESLIQDAITELAKNRTVLVVAHHLKTIQKADQILVFQK GNLLEKGKHGELLEKDGYYTKLWKAQYEV >gi|229269855|gb|GG666056.1| GENE 81 76835 - 78352 230 505 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 287 479 16 217 245 93 30 4e-18 MILLKNVSYEWEDGRTALKNINLEIKKGEFVLISGKSGSGKSTLGSVMNGLIPHYYKGKM KGEAFVSGKDISKLLLHEIGHIVGTVFQDPRSQFFTTTTDEEIAFGLQTICKSRYEIKQR VEEVYAELDIEELKGKSVFELSSGQKQKIAIASIYAMNPKVLILDEPSANLDMKATFDLF LILEKLKKKGTTVVLIEHRLYYVKSLFDRFLLVKDGEIAQDLSREEVIRLEGEFWDENGL RTLELEEYRISEKKDSYQLNDESINGKGLRFCYPNVAKDGKKQNKYILNHLDFNMECGKA IGLIGLNGTGKTTFARVISGLEKIKEGTIWAGKDKSLNHKDLMDMSYFVFQDSDYQLFSE SVLDEMLLGISSKDKKENTQKAKSILSVLGLDKYIDKHPFALSRGEKQRLTIACGMMKQA KVFIYDEPTSGCDKDSMLSVAKLIEEQLKNGTTVLVISHDFEFLANTVSDLWVMGDGKIE TVLDMSESNKFLILDKMRGGRELDR >gi|229269855|gb|GG666056.1| GENE 82 78483 - 79046 330 187 aa, chain + ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 37 166 79 209 226 73 32.0 1e-13 MWKRALRFILFFVLLYCIELGLGKFREASIVFAIYMFIYFASRMTLIAMFGGYITKTTSV SEMLEALNRMKVPRSIGIPFSVLLRFVPTIRIELKALKENMKIRGIVTSRFFPLLHPFKY IEYTLVPLLMRMIKISDELSASALIRGLDSDENRVTLTKLRFRWADLLIGLLGALMIALV IVIQKIY >gi|229269855|gb|GG666056.1| GENE 83 79057 - 79641 685 194 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0868_0145 NR:ns ## KEGG: HMPREF0868_0145 # Name: not_defined # Def: hypothetical protein # Organism: Clostridiales_BVAB3 # Pathway: not_defined # 1 194 1 194 194 298 96.0 6e-80 MKNKLNGRDFITIGIFNAIGIVIYMVVAFAMATTVIGGFIASGVSFMVAATVYILMALKV KKKGVFTISGTLLGLIALSGGHLPHAVFAVIGGIICDLIIGNYESKGRMIIGYGIFALAD FLGTVIPVILFGTASFVERASKWKMSEAQINEALSYFKVSWAVGFGLITFVLACIGAFVA TKILKKHFEKAGVI >gi|229269855|gb|GG666056.1| GENE 84 79907 - 80323 280 138 aa, chain + ## HITS:1 COG:no KEGG:FMG_0975 NR:ns ## KEGG: FMG_0975 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 138 1 138 138 194 86.0 1e-48 MAKKEYYLYVKGKAVPVSEEVYKAYWKITEHEKYLQRKDWKHNVIPFSALDHDGHFVDNI IDEKIDLEKIVEVKMRIEELHRALNTLSKEERELMEAIFYKEESLRSISRREKVTHQAIS GRRDRILEKLRKILEDKI >gi|229269855|gb|GG666056.1| GENE 85 80408 - 80737 344 109 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484684|ref|ZP_03915000.1| ## NR: gi|227484684|ref|ZP_03915000.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 109 1 109 109 117 100.0 3e-25 MKKENTLQEVQEQISELQQEREKCDVKLKQLQNQGKKLEKLANEKERKRRNHRLIQRGLI VERVIKNPIMFTNDEIEELLKVATHTKEYRQAYEEMINGKDMEDETEIE >gi|229269855|gb|GG666056.1| GENE 86 81012 - 82634 1283 540 aa, chain + ## HITS:1 COG:AGpT237 KEGG:ns NR:ns ## COG: AGpT237 COG0507 # Protein_GI_number: 16119945 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 260 27 290 1117 152 35.0 1e-36 MISRGKSKSAVASAAYISCEKIKNEWDGEVHDYHNKKGLLHSEIFLPENVPIALKDRTTL WNSVELNEKASNAQLARNFIIALPKELSFEENKKLITDFIQENFVSKGMIADLAIHDESD EENNNIHAHIMTTLRPINEKGEWQAKSKKEYVLDEKGEKIKLKSGNYKTRKVELTDWNNK GNAEKWRENFASLCNQYLEKNHQEKRVDHRSYKRQGIEEIPTIHMGASASALEKKGIETD KGNINREIKKHNSLVKVIKNKIKEITSWIDSLLGNLQAKYDEYKQTKKDELENKAELFNL YEYISIYNEIQGEKTKNLSYYGQIKKGNADLKRFVKAIYYLKDNKLQTIADLQGKVFELA KQSKNISGDIQSKTQRIKDLNQCVSCIDSIKENKEVYQEYKSKTIFKDSFYNSHKKEIDR YLRARKIIEKFTGTSAIKLNDWQKEISSLEKEIQDLSEDKAKVQDEFKQIDHIKYAVKIV NDEYGIDLSIEIDKAIKRGDKPSVIAQLKKFQEQEERKGQYKQKAKEKAKENYKNKGEER >gi|229269855|gb|GG666056.1| GENE 87 82637 - 83389 510 250 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11437 NR:ns ## KEGG: HMPREF0837_11437 # Name: not_defined # Def: phage-associated protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 250 1 240 240 243 61.0 4e-63 MADNRRYYWLKLKEDFFTDKRIKRLRKISGGDTYTIIYLKLLLLSLKDSGKLYYDGVETD FIKELALTIDETEDDVMVTVNYLVAQGLMEIITENDEYFLTEIPSLIGSETASTRRSRKS RGQKALQCNNGATPCNLLQQNCNGDIEIDKEIDIELEKEGEIEKISPSLYGEYKNVSLTD EEYGKLKDKMQGHREEMIEKLSTYLQSTGRNYKDHYATLVHWYEQDKGKLKESSKSKVYT FEDYDKGEHL >gi|229269855|gb|GG666056.1| GENE 88 83563 - 83886 390 107 aa, chain + ## HITS:1 COG:no KEGG:FMG_0971 NR:ns ## KEGG: FMG_0971 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 107 1 107 107 189 87.0 3e-47 MRIQFTVTDEELEILTKKAIEGGFPSVTEYCKCSSLQENTSYADLYTTLLNKISSLPKGK EFVLRELIATPPALIGRWFYENVNKGLVKNVEHIGKAEGGVEKYKRI >gi|229269855|gb|GG666056.1| GENE 89 83908 - 84915 824 335 aa, chain + ## HITS:1 COG:no KEGG:FMG_0970 NR:ns ## KEGG: FMG_0970 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 335 1 329 329 528 89.0 1e-148 MAEENKEIVIVDNKTIQEKIYLIRGQKVMLDSDLAEIYGYETKNFNRQVKNNAEKFEGED FMFQLTDEEMVELSRCKNFTLNRGTGRGSNIKYNPYAFTEQGIYMLMTVLRGELAVKQSR ALVRTFKQMKDFIIENQDFIGSKELVQIAVQTNQNTKDIAEIKLQMATKEDLKKVMDNFI DPDTYKHFLLMNGDKIEADVAYTKIYKSAKESIYVIDNYIGLKTLELLRAAKDNIEVIVF SDNVKNKDMLTKNILNDFRKDYPNINLKMKVAGKKYHDRYIAIDYGTENEAFYLCGASSK DAGNKISSITKIEESSKDMYHMMFGGMLNNKDLKL >gi|229269855|gb|GG666056.1| GENE 90 85025 - 85210 279 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484689|ref|ZP_03915005.1| ## NR: gi|227484689|ref|ZP_03915005.1| conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] conserved hypothetical protein [Anaerococcus lactolyticus ATCC 51172] # 1 61 1 61 61 70 100.0 4e-11 MNENRNEHNTGTKTIKKIGKVTYEVIVHFNENATETMQDKLKRIMLREMEREKDKKPHKN D >gi|229269855|gb|GG666056.1| GENE 91 85312 - 86034 595 240 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 3 207 355 562 591 109 36.0 5e-24 MKEDELELDTLGDRKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDEYGGRLPVHV RCLLDEFANIGLIPKFEKLIATIRSREISASIILQAQSQLKAIYKDNADTIVGNCDSTLF LGGKEKTTLKELSETLGKETIDLYNTSETRSNANSYGLNYQKTGKELMSQDEITVMDGSK CIFQLRGVRPFLSDKFDITKHKNYKLLEDFNKKNAFNIEEYIKRKGKAKLNRETVITRVQ >gi|229269855|gb|GG666056.1| GENE 92 86200 - 86511 409 103 aa, chain + ## HITS:1 COG:no KEGG:CD1851 NR:ns ## KEGG: CD1851 # Name: not_defined # Def: putative single-stranded DNA binding protein # Organism: C.difficile # Pathway: not_defined # 1 91 1 91 103 131 92.0 7e-30 MKQEMININANLLAEPTFSSFDKEGETVEVVNFTLVKKYGKGKEYINCAAYGEKSETAKA FEKGDLIHIFGYFKKREKDGKTYKNFVVKSYNKIEKKEENEEE >gi|229269855|gb|GG666056.1| GENE 93 86515 - 86673 264 52 aa, chain + ## HITS:1 COG:no KEGG:CD1852 NR:ns ## KEGG: CD1852 # Name: not_defined # Def: putative conjugative transposon membrane protein # Organism: C.difficile # Pathway: not_defined # 1 51 1 51 71 85 98.0 8e-16 MEFFTQAVNVLKILVMAVGAGLGAWGVINLMEGYGNDNPGAKSQGIKQFMAK >gi|229269855|gb|GG666056.1| GENE 94 86791 - 87009 323 72 aa, chain + ## HITS:1 COG:SP1030 KEGG:ns NR:ns ## COG: SP1030 COG3655 # Protein_GI_number: 15900901 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 71 1 71 72 132 95.0 2e-31 MALNYKPLWIQLAKKGLKKTDVIAMAGLTTNVMAQMGKDKPITFKNLERICKALSCTPND IISFEDEFEQEI >gi|229269855|gb|GG666056.1| GENE 95 87265 - 87783 605 172 aa, chain + ## HITS:1 COG:SP0939 KEGG:ns NR:ns ## COG: SP0939 COG4283 # Protein_GI_number: 15900819 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pneumoniae TIGR4 # 1 172 1 172 172 249 83.0 2e-66 MRSYESKEELKNEIKKTFAKYISEFDNIPEELKDKRVDEVDRTPAENLAYQVGWTALVLK WEEDEKKGLEVKTPSDKFKWNQLAELYQWFTEAYAHKSLKELKEQLTKNIEDIYLMIDEL TEEELFKPHMRKWADEATKTATWEVYKFIHVNTVAPFGTFRTKVRKWKKLVL >gi|229269855|gb|GG666056.1| GENE 96 88035 - 88337 266 100 aa, chain + ## HITS:1 COG:SA1748 KEGG:ns NR:ns ## COG: SA1748 COG1725 # Protein_GI_number: 15927508 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 4 98 29 123 126 76 41.0 1e-14 MNEHLKTGDSIPSMRVLARNLKVAVITVQKAYENLQKDGFIETIHGKGSFISARNIELQK IETYKEVEDLAKKIVKSIQSSSISIDDLIDLIKKIYEEGQ >gi|229269855|gb|GG666056.1| GENE 97 88337 - 89212 688 291 aa, chain + ## HITS:1 COG:SA0339 KEGG:ns NR:ns ## COG: SA0339 COG1131 # Protein_GI_number: 15926052 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Staphylococcus aureus N315 # 10 267 5 261 280 190 42.0 2e-48 MDSYENELALKVSGLNKNNKTNDFSLKNINIEVPYGSIVGNIGRNGAGKSTTISCILGMF QKDEGNVEIFGTEYCNQIDIKKHIGVVLDDPNYSLLLTPNEINEVMKFNYSNWEEDSFKN YLNRFNLPIDKKTKQFSFGMKKKLSLAIALSHETKLLILDEITSGLDPVSRDEILCILLE FIENPEHSVYISSHITTDLEKIADYIVFMDDGRVVLSEEKDELLYNYGILRCTDTELEKV EKTDIISYRKEFGRVDILVKDISKIKNKYKEFVVNKPNFDEILLILTWKED >gi|229269855|gb|GG666056.1| GENE 98 89216 - 89860 442 214 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227484697|ref|ZP_03915013.1| ## NR: gi|227484697|ref|ZP_03915013.1| hypothetical protein HMPREF0072_0100 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0100 [Anaerococcus lactolyticus ATCC 51172] # 1 214 1 214 214 272 100.0 1e-71 MKGLLLEIYYKNIKNIFIMNAFLILVWILINLFADIQMVVFAYFAVVIFANSLLLLLSQR KDYDLKLYKYEFMLPIKSKNIILSKYISQVVIILFSILMLIILNYISIYLGKHYFDYGSS DLIALLNVLLGLILQLVSIFYLAMYFIDLEKGDLWMVLGLIGSIMLVSIEIFTLNRLGFS KSGGNVALCVIYSIIFLISFALNSKKMENLKLDN >gi|229269855|gb|GG666056.1| GENE 99 90077 - 90367 384 96 aa, chain + ## HITS:1 COG:no KEGG:M28_Spy1086 NR:ns ## KEGG: M28_Spy1086 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS6180 # Pathway: not_defined # 1 96 1 96 96 94 94.0 1e-18 MKKLEQIRKESKEIKGKIDDTEERLRQLKNQEKKILKQDIVKRRKERTHRLITRGAILES LIENAEELTDEEIKILLEEATKTKEFKETLKIMRKN Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:02:46 2011 Seq name: gi|229269854|gb|GG666057.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD14, whole genome shotgun sequence Length of sequence - 12000 bp Number of predicted genes - 11, with homology - 11 Number of transcription units - 4, operones - 2 average op.length - 4.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 6 - 998 1036 ## COG0673 Predicted dehydrogenases and related proteins + Prom 1700 - 1759 8.3 2 2 Op 1 13/0.000 + CDS 1939 - 2928 1493 ## COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 3 2 Op 2 13/0.000 + CDS 2937 - 3752 1282 ## COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC 4 2 Op 3 4/0.000 + CDS 3762 - 4694 1012 ## COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 5 2 Op 4 . + CDS 4696 - 5052 366 ## COG4687 Uncharacterized protein conserved in bacteria + Term 5054 - 5090 -0.1 + Prom 5095 - 5154 7.2 6 3 Op 1 . + CDS 5213 - 7270 2608 ## COG0480 Translation elongation factors (GTPases) 7 3 Op 2 . + CDS 7288 - 9279 2261 ## COG0296 1,4-alpha-glucan branching enzyme 8 3 Op 3 . + CDS 9294 - 9785 447 ## COG2755 Lysophospholipase L1 and related esterases 9 3 Op 4 2/0.000 + CDS 9786 - 10661 841 ## COG0668 Small-conductance mechanosensitive channel 10 3 Op 5 . + CDS 10639 - 10863 348 ## COG4481 Uncharacterized protein conserved in bacteria + Term 10868 - 10905 6.3 - Term 10849 - 10899 13.6 11 4 Tu 1 . - CDS 10919 - 11806 1194 ## COG3588 Fructose-1,6-bisphosphate aldolase - Prom 11849 - 11908 12.8 Predicted protein(s) >gi|229269854|gb|GG666057.1| GENE 1 6 - 998 1036 330 aa, chain + ## HITS:1 COG:SPy0441 KEGG:ns NR:ns ## COG: SPy0441 COG0673 # Protein_GI_number: 15674565 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Streptococcus pyogenes M1 GAS # 1 316 1 316 319 275 43.0 1e-73 MKLGIIGAGMIAQEVLGFIKDVSNIEVIAIAATPRSEDKLKDLSEKYGIKSYYTNYEKLL ANPEVEVVYVALPNNLHYEVMDKALDADKDIICEKPFTANVNQALKIFKKAEAKGKIVLE AISNRFIPNAVRIKEEIKKLGKIKIVSFNYSQYSSRYDRFKQGDLAPVFSLENAGGALMD LNIYNIDYVINLFGKPKDVRYFPNIEKSIDTSGVCVLEYDDFKAVCIGAKDSAAGFLNTI QGEEGTIEIPDTVSTVGSYRIKRTHGDDQTYNENEDKSRLFYEFVEFEKIIRERDMERVE KLKEITLNTAETLNQARIEVGIFFPADTEN >gi|229269854|gb|GG666057.1| GENE 2 1939 - 2928 1493 329 aa, chain + ## HITS:1 COG:lin0143_2 KEGG:ns NR:ns ## COG: lin0143_2 COG3444 # Protein_GI_number: 16799220 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB # Organism: Listeria innocua # 168 327 3 162 165 201 68.0 1e-51 MVGIILASHGAFAEGIKESAQMIFGAQDKFEAVVLKPSMGPDEFRANLEAAIAKVDAEEI LFLCDLWGGTPFNQSSAVFDGHEDKWAIVAGLNLPMVIEALSERFTESSSHAIAKVIIKS AKEGIKGKPDDVNPVLEVPATSKDKGKNVGGSIPEGTVLGDGKIKIGLARVDTRLLHGQV ATTWTKTVGPDRIIVVSDKVAHDELRKSMIMEAAPPGVKVHVIPIKKMIEIDKDPRFGLT KALLLFETPQDVLEYVEGGGEISEVNLGSMAHSKGKVVVTNALAMGTDDVKTLEKLKAKG IKFDVRKVPADRAEDLDSLLQKAKSELNI >gi|229269854|gb|GG666057.1| GENE 3 2937 - 3752 1282 271 aa, chain + ## HITS:1 COG:lin0144 KEGG:ns NR:ns ## COG: lin0144 COG3715 # Protein_GI_number: 16799221 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC # Organism: Listeria innocua # 1 271 1 268 268 247 63.0 2e-65 MNFINIVLIGIVAFLAGCEGILDQFQFHQPVVACTLIGLVTGHLKEGIILGGSLQMIALG WANVGAAVAPDAALASVASAIIMVLALEGGSANATDAINTSITLAIPLSVAGLFLTMLAR TFAIPIVHGMDAAAEDANFGKIEALSWLAVAMQGVRILVPAIALCFIPPAVVTEQLNRMP EWLTGGMAVGGGMVAAVGYAMVINMMSTKETWPFFALGFVIAAIPNLTLIALGVIGVVLA MIYMTLKSLATSNPGGNAGSGDPLGDIINDY >gi|229269854|gb|GG666057.1| GENE 4 3762 - 4694 1012 310 aa, chain + ## HITS:1 COG:SP0282 KEGG:ns NR:ns ## COG: SP0282 COG3716 # Protein_GI_number: 15900216 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID # Organism: Streptococcus pneumoniae TIGR4 # 8 310 3 303 303 398 68.0 1e-111 MTDTLNNKKVVLSDATRKKVWWRHQFLQGSWNYERMQNGGWAFSMIPAIKELYTKKEDQV EALKRHLEFYNTHPYVSSPVMGVTLAMEEEKANGTAIDDAAIQGVKVGMMGPLAGVGDPV FWFTLRPILGALGASMALTGSLVGPLIFFIAWNAIRMIFEWKTQEMGYKAGNQITKDLSG GLLGRITLMASILGMFIIGALVQRWVSIKFALDVAKVTQQPGSYIDWAALPAGAEGIQQA LKQFSAIGPTALDQVKVTTLQQNLDSLIPGLVPLLLTLGICKLLKKNVSPITIILALFAI GIVAKYFHIM >gi|229269854|gb|GG666057.1| GENE 5 4696 - 5052 366 118 aa, chain + ## HITS:1 COG:CAP0069 KEGG:ns NR:ns ## COG: CAP0069 COG4687 # Protein_GI_number: 15004773 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 1 118 12 134 135 94 43.0 4e-20 MVESQNTKIDYQTKANYLGGLTSHGDLLVGNKALEYYNERNVRDFIQIPYTEIKMVTASV IFKKKITRFAIHTKKDGDFIFNSSDNKAILRALNKYLPDEKLRRSLTVWDYVKNKFKK >gi|229269854|gb|GG666057.1| GENE 6 5213 - 7270 2608 685 aa, chain + ## HITS:1 COG:FN1546 KEGG:ns NR:ns ## COG: FN1546 COG0480 # Protein_GI_number: 19704878 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Fusobacterium nucleatum # 1 685 3 688 690 662 49.0 0 MKNYKTSNIRNLALVGHSGAGKTSLTEALLFKTGVIDKKGRIENGNTVSDYEKQEKKRHI SLQTSIIPIEYNDFKLNFIDSPGFFDFEGEVLQSLRAAESALFVIDGEKGIEVGTEKYWK YTQKINLPSIIFVNKLDKENANFNKVVSDLHIEFGKKVTPLTLMLGEGDNFEGIIDVMDK KAYSYENNEKKELEIPEIRMAEVEEVYNKVIEAVAESDDALMEKFFEGEEFSEAEIREGL SKAILEGKVVPLIAGSTEKMIGLTSLLDVICKYMPSIDDESANIGFRVADGYKAFETKED APFSAVVFKTLADPFLGKISIFKVVSGSISKDDKLFNATKDAEEKISSLFFLRGNEQIKA DKVVAGDIAAFAKLDKTQTGDTLCTKENKIEYKKISYPKPVLFYAIKAVSRADEDKISEA LQKLNEEDPTFANEMNRETSQQVLSGLGNVQLEVLMDKLKDNYSVNTEIIEYKIPYRETI KGKSDVQGRHKKQSGGAGQYGDVFIRFEPSEEDFVFDEEVFGGAVPKNYFPAVEKGLEES LAEGPLAGYKVTGIKATLYDGSYHPVDSNEQAFKTAARIAFKKGIEEADPILLEPVMSLE INVPDENMGDVMGDMNKRRGRILGMEPQEDGSQVIKAEAPLAEVLTYAIDLRSQTSARGT FSMDFVRYEEVPREITQKVIESKKE >gi|229269854|gb|GG666057.1| GENE 7 7288 - 9279 2261 663 aa, chain + ## HITS:1 COG:YEL011w KEGG:ns NR:ns ## COG: YEL011w COG0296 # Protein_GI_number: 6320826 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Saccharomyces cerevisiae # 39 659 49 700 704 521 44.0 1e-147 MARWEILDIDPYLSDYENDINLRMDRLEEQKKNFLAGGKSLKEFANAHNYYGFHKVDGGW IYREWAPNANGLYLIGDFNNWDKHSHPLRKINGEDWEIFVKGVRTIPHKSRLKVLVDANG EIKERIPIFARRVERNEDLDFAAILENPRKDFEWTDKKFKINNKDLLIYEAHIGMAGEEG KVSSYKEFEKYILPRIKAGGYNTVQLMAIAEHPYYASFGYQVANFFAPSSWYGESKDLKS LINTAHEMGLNVIMDLVHSHSVKNTAEGINEFDGTDYQFFHAGDEGNHPDWDSKLFDYHK GGVVHFLLSNVKYWLEEFHFDGFRFDGVTSMIYKNHGRGEAFDSYAKYFSMNTDIDALNY LQMANELIREVKPNAITIAEDMSGMPGMCLPVSQGGIGFDYRLAMGMPDFWERTLKRDDH DWDLSNMWYELTTHRPNEKRIGYVESHDQALVGSKTTIFQLADAEMYDSMAIDIHNFEID RAIALHKMIRWITISEGADGYLNFMGNEFGHPEWIDFPREGNGYSYHYARRQWSLRDADY LKYKFLADFDQAMLAFAKENHQLGNDTYRLWLDNDRKIIAFRNKDIVYLFNFHPTNSYES FHLPIHDIGEFKVVMDTDEARFGGFDRISHGVSYYTERLPGTDYDGIKIYIPCRTALALK KVK >gi|229269854|gb|GG666057.1| GENE 8 9294 - 9785 447 163 aa, chain + ## HITS:1 COG:CAC3448 KEGG:ns NR:ns ## COG: CAC3448 COG2755 # Protein_GI_number: 15896689 # Func_class: E Amino acid transport and metabolism # Function: Lysophospholipase L1 and related esterases # Organism: Clostridium acetobutylicum # 1 161 6 189 190 60 31.0 1e-09 MGDSFTEGYLVENKSYTRFLSKAGFDVVNLGVNGSTTEEMLDRYEGYILTADPADLLIIF GGTNDFMVGYSVDLVFKNLKSIVDLAKAGQILLVIPPFLEEDEYYPIYGEINAKIASLKE KIKTMGLSYIDADTVAGHYLDGIHLASDFHEGLAKKIIGKIGE >gi|229269854|gb|GG666057.1| GENE 9 9786 - 10661 841 291 aa, chain + ## HITS:1 COG:BH2666 KEGG:ns NR:ns ## COG: BH2666 COG0668 # Protein_GI_number: 15615229 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Bacillus halodurans # 26 276 14 264 276 144 34.0 1e-34 MENLENQVLKDLNKNQMMRGIIKNVLISRLITIGLAILIGFILIRLAKKGLNKVLNKNQT SKVGNTAKVETISKLLYSIIKYSIIFIVTNIILDSVGINTSSLIATAGIGGIAIAFGSQT IIQDFIMGIFIVIDDRIRVGDWVIAAGCEGTVEKLSLRTTLIRDFNGSVHIIPNSQIKNV QNFNRGYNLAQVTFSLPYDVSLKEAKEIISTVASKLGHDHDFKGKIIEGFKFFEITSFEP VVYLVKMTATTKEGYQWAYQRAARSLVKEEMEKRNIRTNKVELKNEKIQAK >gi|229269854|gb|GG666057.1| GENE 10 10639 - 10863 348 74 aa, chain + ## HITS:1 COG:BH4052 KEGG:ns NR:ns ## COG: BH4052 COG4481 # Protein_GI_number: 15616614 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 2 60 3 61 65 61 44.0 4e-10 MKKYKLNDIITLKKGHPCGENLWQIERLGADIKLKCLGCEKVIWMKRLDFDKKIRKIKDK EGKMVAIVNYEPEE >gi|229269854|gb|GG666057.1| GENE 11 10919 - 11806 1194 295 aa, chain - ## HITS:1 COG:CAP0064 KEGG:ns NR:ns ## COG: CAP0064 COG3588 # Protein_GI_number: 15004768 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-1,6-bisphosphate aldolase # Organism: Clostridium acetobutylicum # 1 295 1 295 295 322 59.0 4e-88 MNSEQLKRMQNDKGFIAALDQSGGSTPKALELYGVMKDSYSNDEEMFNLVHEMRKRIICD KAFNKDRILAAILFKVTMNSKIDGKYTADYLWEDKGVVPILKVDEGLAERSNGVCLMKPM AHLDELLENAKDRHIFGTKMRSVIYEYNEEAIKEVVDQQFNYAMKIFGAGFVPIIEPEVD IHAKDKAKIEDILSIYMVEALKDIPDDYKFIFKLTLPEEAGHYDVLLDYPQTVRIVALSG GYSRDEANEKLKANKNVIASFSRALAQGLNVNDTDEEFTNKLDKSIEEIYEASIS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:02:48 2011 Seq name: gi|229269853|gb|GG666058.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD15, whole genome shotgun sequence Length of sequence - 2017 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 805 462 ## FMG_0970 hypothetical protein - Prom 917 - 976 7.2 2 2 Tu 1 . - CDS 1184 - 1711 801 ## M28_Spy1082 hypothetical protein - Prom 1739 - 1798 7.4 Predicted protein(s) >gi|229269853|gb|GG666058.1| GENE 1 1 - 805 462 268 aa, chain - ## HITS:1 COG:no KEGG:FMG_0970 NR:ns ## KEGG: FMG_0970 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 268 1 266 329 379 79.0 1e-104 MAEQNKEIVVIDETTIKSKIYYIRNQRIMLDFELAEIYGYTTTRFNEQVKNNSEKFDDDF MFQLTKSEFENLISKKSTSSWGGRRKLPYAFTEQGIYMLMTVLRGELAVKQSKALIRMFK QMKDFIIENQDFISSKELVQIAIQTNQNTNDIARIDSKINTLATKEDLKKVMDNFIDPET YKHFLLMNGDKIEADVAYTKIYKSAKKSIYVIDNYIGLKTLELLRAARDKTQIVVFSDNV KNKDMLTKNILDDFRKDYPKIDLKLKIA >gi|229269853|gb|GG666058.1| GENE 2 1184 - 1711 801 175 aa, chain - ## HITS:1 COG:no KEGG:M28_Spy1082 NR:ns ## KEGG: M28_Spy1082 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS6180 # Pathway: not_defined # 1 175 1 175 175 172 95.0 4e-42 MINEEISKEAGQAAQTIITYTIKAAKETINLEKEIRKKMNDTLEKANGNLKSLMGDEMKL KDLYKKGQLENISIDQSDLKDLKKELNKLGVSFSVMKNKETQNYEIFFQSKDIKVMEYAF KQVIAKENKKEKESILKQIKKYKDLSKNKNKTKEKVKRKVKEKVKPNKKDMTREI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:02:59 2011 Seq name: gi|229269852|gb|GG666059.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD16, whole genome shotgun sequence Length of sequence - 11224 bp Number of predicted genes - 11, with homology - 10 Number of transcription units - 6, operones - 2 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 243 147 ## SEQ_1249 conjugative transposon mobilization protein - Prom 270 - 329 8.1 + Prom 885 - 944 9.9 2 2 Op 1 . + CDS 976 - 1614 315 ## TDE1606 TetR family transcriptional regulator + Prom 1662 - 1721 5.5 3 2 Op 2 . + CDS 1756 - 2352 373 ## FMG_1416 hypothetical protein + Term 2391 - 2443 11.4 - Term 2362 - 2423 4.2 4 3 Tu 1 . - CDS 2585 - 2902 171 ## - Prom 2922 - 2981 2.3 5 4 Op 1 . + CDS 2790 - 3056 130 ## TDE1604 ABC transporter, permease protein, putative 6 4 Op 2 . + CDS 3113 - 4507 776 ## COG1122 ABC-type cobalt transport system, ATPase component 7 4 Op 3 35/0.000 + CDS 4497 - 6287 235 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 8 4 Op 4 1/0.000 + CDS 6280 - 8025 238 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 9 4 Op 5 . + CDS 8108 - 9400 1098 ## COG0534 Na+-driven multidrug efflux pump + Prom 10030 - 10089 8.3 10 5 Tu 1 . + CDS 10142 - 10615 626 ## SEQ_1231 DNA-binding protein + Prom 10793 - 10852 7.2 11 6 Tu 1 . + CDS 11068 - 11224 124 ## gi|256544822|ref|ZP_05472194.1| aminoacyl-tRNA hydrolase Predicted protein(s) >gi|229269852|gb|GG666059.1| GENE 1 3 - 243 147 80 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1249 NR:ns ## KEGG: SEQ_1249 # Name: not_defined # Def: conjugative transposon mobilization protein # Organism: S.equi_equi # Pathway: not_defined # 1 80 1 80 122 112 76.0 5e-24 MTSRFRNNGIYLMLSDEELELLNKKYKASKCKTLRQFIMKCILEKDIYVLDMDVFREMST NISRTSNNINQIAKRVNTTS >gi|229269852|gb|GG666059.1| GENE 2 976 - 1614 315 212 aa, chain + ## HITS:1 COG:no KEGG:TDE1606 NR:ns ## KEGG: TDE1606 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: T.denticola # Pathway: not_defined # 1 210 1 210 225 267 63.0 2e-70 MANGDYEVTHSKILDCGKKIFKEKGFEKANLRAICKAAGVTTGAFYGHFEDKEDLFCKLV EPLIDQINIYYTMYEDKSFDVYKKESPISREAIQNVLESKAQGAIEMVLYFFEHKDVFEL LIFSSYGTKHNNFLDSIIEREDKNHFKILSMIYGENNVNDVITNRGIHLLNHAYFYALSE VAVHSQNKEEVKLNASLISQFFNEGWRKIRGL >gi|229269852|gb|GG666059.1| GENE 3 1756 - 2352 373 198 aa, chain + ## HITS:1 COG:no KEGG:FMG_1416 NR:ns ## KEGG: FMG_1416 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 184 5 182 196 129 45.0 5e-29 MNLKSVVKIAVFSVIGFVLTMGLGFLTGSFGMLPSLYLSSALPTIIVAPVFVIMCKQVQQ RGTAFLYFLLMGVFYVLMGMWPVIVVCAIAGILAELVIGKKENYVNKNMRIGTAFGAGMF IYSLHAMYFMFVFGVEGLAKQFPKMFTKDYATFLYNFYTPRNILICLLISLVASVIGAYF GTYIYNKFFSNRKKKSVL >gi|229269852|gb|GG666059.1| GENE 4 2585 - 2902 171 105 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSMHLYIRGTKYNSNVLIGLKILALNPLIFMPLFISFILIEISGIKRKNTVIPIPIPPST PIFLNAAIRCEELYDDRTLPNMKSGANFNTTSSIVYIEPIKTFPK >gi|229269852|gb|GG666059.1| GENE 5 2790 - 3056 130 88 aa, chain + ## HITS:1 COG:no KEGG:TDE1604 NR:ns ## KEGG: TDE1604 # Name: not_defined # Def: ABC transporter, permease protein, putative # Organism: T.denticola # Pathway: not_defined # 1 85 143 227 228 97 51.0 2e-19 MKEINNGMKIRGFKASIFKPIRTFELYFVPLMYKCIDISDTLTCSIISKGIEYDGKKTSF HEVKITFIDIAMIVGGMILLGASLWKKF >gi|229269852|gb|GG666059.1| GENE 6 3113 - 4507 776 464 aa, chain + ## HITS:1 COG:MTH454 KEGG:ns NR:ns ## COG: MTH454 COG1122 # Protein_GI_number: 15678482 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanothermobacter thermautotrophicus # 1 430 26 457 480 244 35.0 3e-64 MSVNKGEIVVLTGLSGCGKTTLLRLLNGLIPSFYDGDLDGEIKILGKDITAYKKGELAKY IGNVFQNPKDQFFCDVVEDEIALVGENLGLDRDTLKEKVEEAMDLLGISHISKKSIFELS GGEKQKVAIAGTLIYDTDIIFFDEPSSSLDYDSIKHFSEILLRLKAMGKTIIIAEHRLYY LKEIFNRLIYIKDGTICGIFPNGSLSNDKCKELELRTLNERELVSEIEPIVAESYIKLNN ACIHQGKRTLIKNLTFELGKSEIMGVIGPNGIGKSTLAKALCGLSEKYLDVNYGHKQKER LRNSYCVLQDVDAQIFLDTVENELIFCKDKNSESDLEEIRNYLKDTDLWNKKTNHPQKLS GGQKQRLAIITSFLSGRKLIILDEPTSGLDYKSMKIMSELMKEKAKEIPIIIITHDLELL FKTCHSVLMLGDKDYKKISVKGNEELIMDFMDKKILWKEINYVK >gi|229269852|gb|GG666059.1| GENE 7 4497 - 6287 235 596 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 360 568 147 354 398 95 31 2e-19 MLNKVFEYAGTHKKSIHLASFIMLISVIMGVLPFLFVYKIINPLVLGKQLEFERIVFLLI SILVCLVLQAVLGGVGLNVSHKAAYNTLLGLRTSLQKKMEALPLGVVEEKGTGTIKKMFV DDIGSLEVLLAHSLPEGIANLIVPIMVYVSMFFIDWRLALMSLASIPISVLAMMIMYSVG MKQMGPYYMASGKMNNTIIEYVNGMEVVKVFNKQTESYERLSKDISNYRDYALAWYKTAW PWMALYSALLPCTIILTLPLGGYFVYMGYASLSNLILILCLSLSIGLPLLKALGFLPTMP QLNYKISALEQALNMAPLKQGENDFKGTGQTILFDNVTFGYQLRKMGENGQPETYIKNVI HNVSFTARAGEKTAIVGESGSGKSTLAKLLIHYYDVLDGSISIGGQDIQDIRLESLNKQI SYVAQDQYLFNTSLLENIRIGNLDASDDDVIEAAKKAQCMEFLNRLPNGIYSLAGEAGKM LSGGERQRISLARAILKNAPIVVLDEATAYADPENEEKMEAAIRELVKDKTLIVIAHKLP SIVDADQILVMDHGRLVANGKHKDLLESSVEYRKLWDATLFSKDWKISRKKGEMNV >gi|229269852|gb|GG666059.1| GENE 8 6280 - 8025 238 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 340 560 132 353 398 96 30 9e-20 MFRLISRILNLSGKYKNRIKSAFIFAFVESILSKMPIFIAFTVLIGFYEKTNTPKTFLYV GVGLVLVVLLQAVVHFLSDKLQSAAGFMIFADKRMELGNHLRKLPMGYFTAGNLGKINSV LSSDMAFIEEVSMSTIANMMSYVLSTLVLTIFMFVLDYRIGLIAMCVTLVATLLANSMNK MSLSESVIRQEQSEKLTDAVLSFAEGISVIKSYNLLGENSKSLTDNFISSKETSIKFENK ITPWTTGLNIIYGIGITFILAVALYLNSKGTLGLPYMLGLILFVFDLFSPLKTLYGEATR LTVMNAALDRIEEVLNETELQDVGKKQISNSDNSEPEICFNHVKFSYGEKEVLHDMSFKM NKNTMTALVGQSGGGKSTVANLLARFWDVDSGEILIRGVNIKDVSLSELMSEISMVFQRV YLFQDTIFNNIAMGKENATKEEVIEAAKKARCYDFIMALPDGFDTMIGEGGATLSGGEKQ RISIARCILKNAPIVILDEATASVDVDNESYIQEAISELVKNKTLLVIAHRLNTIRDADN IIVIKEGNIVEQGTHNELISLNGIYKNMVELQNKNNGVKIL >gi|229269852|gb|GG666059.1| GENE 9 8108 - 9400 1098 430 aa, chain + ## HITS:1 COG:lin2873 KEGG:ns NR:ns ## COG: lin2873 COG0534 # Protein_GI_number: 16801933 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Listeria innocua # 1 428 17 445 450 214 32.0 2e-55 MFQLSIPAVIGMIVIGLYPLMDGIFAGNIIGQSAMTACGVALPLTFLNSGTSTLLGVGSA SILSRSLGKGDRETVDKIMGNLIYFVILFSVIITVGGIILAPHFLDLVGASGEIKELGVR YLRVIFLGSIFVNFTQSANMVMRGEGLMKRAMGIMAMGAFINIILDPILMKAMGEYAIEG AAIATVVAQIIQAIVTLYYFKNKSENVKIGKIRKYKEVYKEMFGVGVSAMIMQVFFMIQQ TLLYKQAFLYGGETNGILMAATLRIYAFSFIPLWGMSQGLQPVVGTNFGAKKFDRVRETM KVFSIGGLVLAAIFWIPVQIFTREILSGFNVSEEIISQGLNNLRLFYSVFILYGVMVMTI TFFQAIGDGKKAGKIVMLRQLILFVPAMLILPKIFGSSAVWWAEPAVDLLMIIVGLIMQG KALSKMVKGN >gi|229269852|gb|GG666059.1| GENE 10 10142 - 10615 626 157 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1231 NR:ns ## KEGG: SEQ_1231 # Name: not_defined # Def: DNA-binding protein # Organism: S.equi_equi # Pathway: not_defined # 26 154 4 132 133 117 58.0 2e-25 MSKCRSPPFFIFKKEFEKEKEDKMSKEKYIYVDGKKIYVSDEIYREYKKLKNREEYLSRL DRKYRDLYFTSENDAIENIVDKSVNVEKIIETKLRIGDLYKALDNLNEEERKIIDALYFE EKTIRDLAKEKDVSSKKIFTSRNKILQKLKKLLDVEG >gi|229269852|gb|GG666059.1| GENE 11 11068 - 11224 124 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|256544822|ref|ZP_05472194.1| ## NR: gi|256544822|ref|ZP_05472194.1| aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170] aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640] aminoacyl-tRNA hydrolase [Anaerococcus vaginalis ATCC 51170] aminoacyl-tRNA hydrolase [Peptoniphilus duerdenii ATCC BAA-1640] # 1 52 1 52 55 75 100.0 1e-12 MCDEHNINTEMKTDKKDKQMINQIDGWNIEVKFNENGFSLENLVEEYIKEKI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:03:25 2011 Seq name: gi|229269851|gb|GG666060.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD17, whole genome shotgun sequence Length of sequence - 1791 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 664 644 ## MGAS10750_Spy1694 putative surface protein 2 1 Op 2 . + CDS 680 - 1558 965 ## MGAS10750_Spy1695 hypothetical protein Predicted protein(s) >gi|229269851|gb|GG666060.1| GENE 1 2 - 664 644 220 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1694 NR:ns ## KEGG: MGAS10750_Spy1694 # Name: not_defined # Def: putative surface protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 220 564 783 783 269 85.0 5e-71 KDKNLNQDLSKKLDELLKLQKENKEKKEDKKSQDKKWDELLKADDKNILNQFDLNKMKKQ EEQQDKKQVKDEKEFAVFQVNKNFYNIIKDGKKTTVYMDVKAYIKDNRIMLPVRYAAYTL GFNVEYDDSKREAIFSNKENTALPKKTLRLNIDTGVMKDSQGNIYHSDTKPVIINGRIHA SISNIAKAFNASCGDIRDEKDQSIEWDNSRKAVYVFKNIK >gi|229269851|gb|GG666060.1| GENE 2 680 - 1558 965 292 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1695 NR:ns ## KEGG: MGAS10750_Spy1695 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 2 252 3 248 289 211 55.0 4e-53 MKKKRLGVALVLLLLLLSMPSISIAKSNDNEIKNQSNDIYLPEKSKELESLFDEDVYEPS NESQKIPYQEVPKIQENNIKNEQVDKKEKPSKLVKGGNTKAINPLATKENKARGTVIENV DKNGQDITPKVEDQTSRDEKKENPIDVRQFLTFQTKSGKTMHLIVDHSENQENVQLLTEV GEQDLLNMIEGESEAKPKEEVVKKEEPVEEKPKKEEKEEKKSGVGLYLFMGLIIVGVMGA GYYFKIYKKNEEASFEDEQDYNELEDDYESEGEDYDLEDKEDTEIIPDEDEF Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:03:44 2011 Seq name: gi|229269850|gb|GG666061.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD18, whole genome shotgun sequence Length of sequence - 32212 bp Number of predicted genes - 25, with homology - 25 Number of transcription units - 12, operones - 5 average op.length - 3.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 243 162 ## SEQ_1249 conjugative transposon mobilization protein - Prom 378 - 437 9.1 + Prom 726 - 785 7.6 2 2 Tu 1 . + CDS 1012 - 1302 242 ## COG1321 Mn-dependent transcriptional regulator + Term 1307 - 1355 6.2 + Prom 1307 - 1366 6.4 3 3 Op 1 . + CDS 1465 - 2217 645 ## COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis 4 3 Op 2 . + CDS 2207 - 2899 484 ## COG2091 Phosphopantetheinyl transferase 5 3 Op 3 . + CDS 2899 - 4485 1161 ## COG1021 Peptide arylation enzymes 6 3 Op 4 3/0.000 + CDS 4498 - 10569 3998 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins 7 3 Op 5 3/0.000 + CDS 10566 - 12692 1125 ## COG4693 Oxidoreductase (NAD-binding), involved in siderophore biosynthesis 8 3 Op 6 . + CDS 12676 - 16629 1809 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins + Prom 17011 - 17070 7.3 9 4 Tu 1 . + CDS 17106 - 17714 216 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 17723 - 17782 6.0 10 5 Op 1 35/0.000 + CDS 17818 - 19596 1094 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 11 5 Op 2 . + CDS 19589 - 21334 219 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 21453 - 21507 0.8 + Prom 21382 - 21441 4.7 12 6 Tu 1 . + CDS 21563 - 22081 187 ## gi|227486059|ref|ZP_03916375.1| hypothetical protein HMPREF0072_1462 + Prom 22092 - 22151 4.0 13 7 Op 1 . + CDS 22182 - 22439 223 ## Spirs_1377 cyclase family protein 14 7 Op 2 . + CDS 22461 - 22829 180 ## SEQ_1240 equibactin nonribosomal peptide synthase protein 15 7 Op 3 . + CDS 22843 - 23430 422 ## SEQ_1239 ABC transporter permease protein 16 7 Op 4 . + CDS 23432 - 24103 283 ## SEQ_1238 ABC transporter permease protein 17 7 Op 5 . + CDS 24118 - 25491 278 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 25564 - 25623 8.7 18 8 Op 1 . + CDS 25696 - 26745 446 ## SEQ_1234 oxidoreductase 19 8 Op 2 . + CDS 26796 - 27713 451 ## SEQ_1233 hydrolase + Term 27929 - 27977 4.8 - Term 27910 - 27971 8.8 20 9 Tu 1 . - CDS 27978 - 28490 316 ## COG2207 AraC-type DNA-binding domain-containing proteins - Prom 28738 - 28797 7.9 + Prom 28624 - 28683 2.0 21 10 Op 1 23/0.000 + CDS 28704 - 29243 428 ## COG2963 Transposase and inactivated derivatives + Prom 29336 - 29395 2.2 22 10 Op 2 . + CDS 29438 - 30100 245 ## COG2801 Transposase and inactivated derivatives 23 10 Op 3 . + CDS 30142 - 30993 654 ## COG0534 Na+-driven multidrug efflux pump + Term 31147 - 31192 2.1 + Prom 31020 - 31079 7.0 24 11 Tu 1 . + CDS 31229 - 31639 402 ## FMG_0934 hypothetical protein + Term 31655 - 31711 11.2 + Prom 31781 - 31840 7.2 25 12 Tu 1 . + CDS 32056 - 32212 120 ## gi|313888380|ref|ZP_07822048.1| conserved hypothetical protein Predicted protein(s) >gi|229269850|gb|GG666061.1| GENE 1 3 - 243 162 80 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1249 NR:ns ## KEGG: SEQ_1249 # Name: not_defined # Def: conjugative transposon mobilization protein # Organism: S.equi_equi # Pathway: not_defined # 1 80 1 80 122 110 73.0 2e-23 MTSRFRNNGIYLMLSDEELELLNEKYKASKCKTLRQFIMKCILEKDIYVLDMDVFREMST NISHTSNNINQIAKRVNTTS >gi|229269850|gb|GG666061.1| GENE 2 1012 - 1302 242 96 aa, chain + ## HITS:1 COG:MK0175 KEGG:ns NR:ns ## COG: MK0175 COG1321 # Protein_GI_number: 20093615 # Func_class: K Transcription # Function: Mn-dependent transcriptional regulator # Organism: Methanopyrus kandleri AV19 # 2 92 36 125 158 70 38.0 8e-13 MDLANYLEYKRPTVTRMLKKLENKGLIIYGEDKIIRLTEKSKIFCKKMYTRHKYLTDVFI RLGIDAKNAENEACIIEHVISDETFEKLKKHFDYNL >gi|229269850|gb|GG666061.1| GENE 3 1465 - 2217 645 250 aa, chain + ## HITS:1 COG:CAC1022 KEGG:ns NR:ns ## COG: CAC1022 COG3208 # Protein_GI_number: 15894309 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Predicted thioesterase involved in non-ribosomal peptide biosynthesis # Organism: Clostridium acetobutylicum # 14 243 17 246 253 150 37.0 3e-36 MSKNFEMLNKELDENNIKASLVIFPFAGGGVSAFRKWKDEFEDIKLLVAQYPGRENRFSE KAISDINILVDNLFEDMKENFNFRKPYYLFGHSMGTKIVYELALRIKNSDYINPRGIIIS GGRAPLYKEPHPIYHLDDDGFIEGLRRYEGTPKEILDNKDLISIFLPTLRADFVIDEDYQ DTKFEKLESPILGLMGDKDQEMTLDELIKWQDYTTKEFTYRYIDGKHMFVNTSPESVIKE IKEFIKVNEN >gi|229269850|gb|GG666061.1| GENE 4 2207 - 2899 484 230 aa, chain + ## HITS:1 COG:RSp0163 KEGG:ns NR:ns ## COG: RSp0163 COG2091 # Protein_GI_number: 17548384 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantetheinyl transferase # Organism: Ralstonia solanacearum # 18 188 12 194 272 61 27.0 1e-09 MKIEEYEIRKINDFLTLEDLKDKLDSNNLILIKAYTDKLLEEKLLPYLTKEEIIKSEDYK SEIAKINYLASRAILNLTLKGLLEKGINDLRVKRDKNNKPYVENTLGLKFNISHTEDLVL LAFSKIEVGIDVEKINYQFEFKDILENCFTRDEIINIDNNIISFYRYWTAKEAYLKCDGI GLIRNLREIEIISYGNKVIEIIDNKNNIISRLQPLNYDGKYVGAICSEEN >gi|229269850|gb|GG666061.1| GENE 5 2899 - 4485 1161 528 aa, chain + ## HITS:1 COG:BS_dhbE KEGG:ns NR:ns ## COG: BS_dhbE COG1021 # Protein_GI_number: 16080251 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Peptide arylation enzymes # Organism: Bacillus subtilis # 7 525 11 526 539 432 41.0 1e-121 MNIELKEKLEKFYDEQVWPHITLGEFIEDCAKKYGDKIALVDGDVELSYQELNRKACHYA NGLLKAGFKKGDRIVLQLPNCHEFVIILFAMFKIGVIPVLSLPAHRKNEIKGILEKSGAI AYIAKDKYLGFSYVDMIREVREELNIDFEVYILGDNQGYKNFYNLDDKDYLSQQIEINYK EIGLLLLSGGTTGIPKLIPRRHCDYIYVAKETAKRCKMDQDSIYLASLPIAHNFPLCCPG ILGTFFIGGKVVLCPVTSPDEILPLIEEEEVTITGLVPAMANICIDFIKEDDYDISSLKV LQVGGSVLEEKLAEKIEKEFGCKLQQIFGIAEGLIMTTSLDDDSKTIFTTQGKPISEFDE LLIVDEDGEEVKDEEYGELIVRGSYTIYGYYKLPEVNKRCIDKDLYFKTGDKARKLKDEN YQVVGRISETINRAGEKITPSEIEDILLSNENIGDVQVVGVPDELLGEKIGVFILKDEKD ELSLEDIRTFLANKNVAEFKLPDSIKYIDSWPLTALGKIDRNKLKRIE >gi|229269850|gb|GG666061.1| GENE 6 4498 - 10569 3998 2023 aa, chain + ## HITS:1 COG:YPO1911_2 KEGG:ns NR:ns ## COG: YPO1911_2 COG1020 # Protein_GI_number: 16122159 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Yersinia pestis # 97 983 5 883 1381 625 38.0 1e-178 MEFDARKEIKLIIEKWLKDTLKKSDIKENDNLIEKGLSSMQVMQLSGILKKEGLRISFAK LIEKPTLNSWFDLVANSKIIKKHSKDNKKSNDGKDSFNLTDVQYSYFIGRSDDQTLGGVG CHAYIEIDGKDIDYKRLNDAWNILQYRHPMLRARFTEDGKQEILDKPFSEEIEVFDLSNL DDEETKIRLDEIRENLSHRKFRVEIGEVAGLKLTNLSHNRNKIFFDLDLLVADVMSMSIL LKELGELYLGKELDNLNNYTFKDYINNLEVDSEIYKKDQEFWKEKIDSFEIERPNLPLKK APEQIKETRFTRRKRVIEKDKWSKIKELAASYKSTPSMVLLTAYALILERWTNQDKFFIN LPLFNRDLSNENLKDMVADFTNILLVEHERKNDTSFLETLNRISETFIDNASHSSYSGVQ VQRDISKSQGTSLNVAPVVFACNIDYPLETETSSKALGRITYMVSQTPGVWLDFQSYIKD GDLVLCWDSVDELFPEKMLDDMLNSLEEQLLRLTEKGNWKEKFDVLPKNQKQAREKELQS ILPLNFPDERLYDGFIKNVKENPEKIAIIDSESKEEISYIDLYEKSLKIAGFLKENGIKK GDYVGITLPRSSKQIYAIFGILFSGAAYVAVGINQPSERRTKIYEQIGIKFVISENKTIE NCKLDTGEVSLIDLDKTIDKSLGLDKPIEVSPFDSAYIIMTSGTTGVPKGVEIMHTSAIN TINDLNEKYSINSNDTLLMVSAIDFDLSVYDIFGILGVGGTLITNNEDNYRNPDEWIRII EKYKVSVWDSVPILFDMLVTMAEGEKKNLPLRIVMLSGDWIAKDLPGRFYKISEKENSIV VAMGGATEASIWSNYLNVPREIPKDWISIPYGKPLKNQVYRVVDELGRICPNYVKGELLI GGVGVAKCYHGDEDLTNRKYFEEDGLRWYRTGDNGRFWNDGTIEFLGRKDTQVKIKGHRI ELGEIENALNLFDCVNKSVALVIKDGNINKLIGFVEGIADEEFNQKSVSIPDGNEEISQK YAYESFINELDSSVDRIILNIIKECKIFADGNCVTYEEIISKINPADSLKNVIKLWISNL CKKEIILKSSKDTYCLNKSNYDNFEKIKNIGIENNNSKLNEILLLINSNLLGIIQGKINP IEFFYHDYPLLSPVNLSKMLPWYNKVIEYILDYMQKDMDYNQKNIIFDYDSRDDLISERI SSISNNNMHFYFDKSLNKLKQISGDFSAKSLHENDIESFHRTVQYVLAFNSIHRDINVKE SLNELKNLLTYDGKIIMVEPKKRLGIQDITTSILNNFAGYDDSVISIDEWNNLFSDSGLR CIKQGSIGESMIYILELKKSSADPEFIKEELKRKVPIYMVPDDIVFIENMPQNKNGKIDR KQLEEKYIYREISSPNFSENLRQKELEEIRNLWIEVFEKHITTGTNFFSSGGDSLIATRL ATKIENNYGIKFSIKDVMENITIESQAKIVKDRLKGHNFVDKISVMEDTLNGEEFDLTEV QQAYYIGRNEDMILGGVSTHCYFEIESMNIDVDKLEQAWNHLIDIHPMLRAVITDNGKQK ILSDVPYYKIMTSVDSEVAIRNSMSQQVLNINQWPVFDIRISQHESKADIIHISFDNIIL DGWSMFYVLEQWSNIYKYGKEDYKASNSTFRKYVDYSNKLKNTQKYSEDKEYWLKRVDGF LKAPIINNYQNNPITKGTKFIRREAYIEPIKWEAIKDIASKNNLTITSLLIGVYAEAIRE VSENENFTINVTRFNRPQIDKEINEILGDFTTLLLLEIDNAKYKKLLDRFKEIQKRLIND LNHELFSGIEMQKELRKVETDKLVLMPIVFTSGIGINSWDDDKSLGKIVYGLSQTPQVFL DNQALVYNDGLKIYWDSIDEVLGKKNLDVMFEKYVNILNEIADNSFDEESTVMRTRKYND KYFSVNNTSKQAEEIEKIGNGDFDIEKEMKGIWEEILNTSVENNHCKFFEAGGDSLKAIQ LRNKIQEVFLVDIDLLDIFKNPSIKELSAIVTKGKGSIVEGSL >gi|229269850|gb|GG666061.1| GENE 7 10566 - 12692 1125 708 aa, chain + ## HITS:1 COG:YPO0774 KEGG:ns NR:ns ## COG: YPO0774 COG4693 # Protein_GI_number: 16121087 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Oxidoreductase (NAD-binding), involved in siderophore biosynthesis # Organism: Yersinia pestis # 3 350 5 357 375 137 26.0 9e-32 MIKKVIVCGSRFGQFYIEALKDMENIEVIGLLANGSNRSVKCADHYNLKIFTSVESLPKD IDVACVAIGSSVFGGNGVKIAKELLKKRINVLFEQPIHVREISELYNTAISYNVKIKIGN LYNNLPAVRNFLLNVERADMINHASYLMVDLNTQLSYPVSGIIKQILKDTTVVNENYKYI EQESCCNILSMNVNKVEVLVKAFNEMGQNNLDSNMRMLFSMVVGYPSGRLVLSSPLGPVF WEQPPNVPKIDLIPSFLDGDDRVGCNKPWISVLYQADEYNKNYIYRNIWVKAIKDDLKKF IFNKINEEQLIDIEIQHDLEIAVLWQKLMGNLGYPKIKLNDTTKYIDPYIFKRTDINCYS VKESINELNKISRDTMFYYLTKHISENSIPISILFNKIGISEKYKIIMERWILHLESFNY LEKKDDSIIIKSKRIDWNDLIGKWDLLESKWNTKAMPMNVFQYFRENARLLNDLLNNKVN ANEILFSKGSDEIAKGLYSKTAIAIYLNELIVSNIKELLNEKNITILELGGGTASTTEKI VSNIEYDKYIFTDISPYFIEKAKDAFREYTGIEYGIINIDDDESYNQVSSKVDLIIAVGV LNNARNIESSLMYIKKILKDDGILMIVEAVDESPEILISQVFMMTETDDIRNEENITFLK MNQWIEMFKKLGFKLLTFEPKNGNWLEDFNQKLFILKNNGDEDYGNRK >gi|229269850|gb|GG666061.1| GENE 8 12676 - 16629 1809 1317 aa, chain + ## HITS:1 COG:YPO0776 KEGG:ns NR:ns ## COG: YPO0776 COG1020 # Protein_GI_number: 16121089 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Yersinia pestis # 7 467 17 500 1939 252 29.0 4e-66 MGIESKLIELYRNGLEVFVNKEELNYRSTSGIPKKEDIDFLKKYKNEIVTILNKNSINST CVLEDNEIPLTEIQSAYLLGRENHFELGGVSSHVYMEARLPLLEKSRTEDVWNNIIKEHE ALRSIFTSNNTQKILKRDMYYPIEFNEGIGINEKVKSTRERLRGKKYKSNIWPLFDIVIS QMDDYSLLHLSFDFLILDWTSILILLKEFENNYFNNVTISNSIYNLKEIRMSQLALKKSS KYLSDKEFWESRIPTLPGSPLLPIQNTTIQDGFERMQIKVDIIKWTKIKSNLAKLGFTQT SFLITIMAIIINNWSSNSKFSLNLTTMNRPKKYDEIDIVNDFTATNLLEVEINNKQLFCD LLKKVQEQIIDDLKHETFTGVETIRAIRKDTAKRNSIFPFVFTSALGISSSDYKYIHLQE EGLSETPQVFMDCQVMEVNQELIVNFDLRSGVFSKELSKAIVESYLELLNCFSDSAFFNV PISYIYEKNGLESNKALFNDDLSKQKNYYGDIDDFNNVKLKTLSFSDKQKSEDTFSVMEV KNILKERDDFSNQVMLRTLIKIREGIDFSNQNLDYKSEVINNYHWIINKWEDHLEKCGYL EKKENNYIVLNEGMELLKQKIDMDLLKSRWTQRIGNPDVLDYIVKISENIIDILNGKIEP ISILFPQGNFRVVESIYGDNIFCKYYNEIIKTAIDEILNTKSYVDKCVKILELGAGTGNT TKTILQMFNEKRLHYRYDFTDIALSFLSNAKGKFDDYDNVEYKQIDIDKSFDDQNLKENE YDIVLAVGVLENAENLSFTISNIEKVLKNDGWLIILEPVIDEPWILMTQLFFMNKRSESE SKNPIYFNRKNWINVISNHNGKEISSKIFSLGEKNKFNYNNIEIFFAKKNILGMDKLTES KGKEENNIHCEGENNSLLRSICGLARNTLKNDEVNIYSDLYECGADSLLLAQMANEIKEL LYNEGNNKIDYDMIFRQLLSKPRISDLLEIIIDKPEIKEQSKDSKKTGNIGQITILNEGH ELLRVIFHAGFGTMNSMKYVIDNLLKDNSSSIACITVKDSNLYNSVSNEDLVPAISREYS ELIFATGYKKVQLIGYCSGGCLALETAHHLMKKHIAIDDLVLLDSYPSPKKRIDEKIIEL MFLPNYNITPHMVIKDIDDNELNSVVSEIYKTIKINKEISLLEYLGEKPKHIKLFNSLRE LFSLDLEERMKLYAKTIWDVTNEEIGYEFLKTTYQTYISTFNSSNYEPFPYIGRVRYLSA KENFDLVQMEKQNVINYWKKFCLGQFSIHEIPGDHVSCVENKDNAKYVSNLIINNQI >gi|229269850|gb|GG666061.1| GENE 9 17106 - 17714 216 202 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 179 24 217 245 87 32 8e-17 IPKNHTIAIIGNNDSGKTTFSRCLCGLERKFNGKTVIDGKTHTNKEMLKKSFLVMQDVNH QLFTESVNEEIRISTDKIDDNKINEILDKFNLKSKFDSHPMTLSGGEKQRLAIITALVSK REILIFDEPTSGLDRDNMLEFSDFVKELSDDITKIIVTNDYELILEICDYVIHLEDGKIK DSYFLNDKGNEKLKDYFCDNQI >gi|229269850|gb|GG666061.1| GENE 10 17818 - 19596 1094 592 aa, chain + ## HITS:1 COG:SA2217 KEGG:ns NR:ns ## COG: SA2217 COG1132 # Protein_GI_number: 15928007 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Staphylococcus aureus N315 # 5 578 1 578 587 624 53.0 1e-178 MVDLLNNKWIKTIFEFASNCKDKLILSVIMAIIGVFCSIIPYWAVYRLMITFMEQKASVE YVVCYGAIAIISYVVRYICHGISTSLSHISAYTILRNIREKLGEKLLNISMGNASKKTIG EYKSIIVDKVETIEMPLAHIIPECISALFLSVSIAIFMLFISWEMTLAMLLTVPFALIAY KKLMGNFNELYEAQMKSNKYMNSTIVEYIGGIEVIKTFNQDSQSYQKYMDAVNGYKEHTL NWFKSTWNVMNFASSVLPSTFLGTLPVGMILYLKGSLTPADFCICLMLSLGIVSPLTQFT NYVNLLKSIEYAIKDINEILQIPNLISTDREVAVDTMNIKFKDVSFSYDDENTVLENINL DIAENSFTAIVGPSGSGKSTIVKLISRYWDIDEGEITIGGKNIKNIPLKQLNDFIGYVSQ DNFLFNESIMENIRMGNSNASDEEVIEVSKICACHDFIMELEDGYNSNVGSLGSKLSGGQ RQRLSIARMMLKNSPIILLDEATAFIDPDNEEKIQEAIKLLTKNKTLIVVAHRLSTVKDA NKIVVLNNKKILDTGSHDELLERSSLYKEMWLSHIGAKTKSTVSNIGGESYV >gi|229269850|gb|GG666061.1| GENE 11 19589 - 21334 219 581 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 341 559 132 351 398 89 28 3e-17 MFKTTSRILKWAKKYKKRMRKGFVYSFLNSVFISMPIMLSVYVFNLILKNYFDEGNYGNK EIIIVTILMIIFVLGRYATSYLKAVNQESIGYEVTADQRIQIGDVLKRVALGFFQENNPG ELTSAVTTDLSFFENYAMKMIDIVINGYIMAAVMILSISFLSWKLGIIAVLGVLTSYIFL AMLGRFSEKNSIPYHKAQNDLVEATMELVMGLPIVRAFNKDDASLKNFNEAILNSKQTNI KIESQYTPFNCLHLFSLKLASILIVILAGIMTIKAQIEMPIMIAVFIFSFIMFSSVENVN SATHVLEVLDKTLDNLDKMKSADFLDENGKDLPLKNHNIIFDRVSFSYDKTPIIKDVSFK IPEKTITAIVGPSGSGKTTICNLISRFYDVKEGSIRIGDVDIRDLSLSSLLSNISTVFQK VYLFNDTIENNIKFGKPTASKEEVINAAKKAQCHDFIMKLPNGYKTIVGEGGGALSGGEK QRISIARAMLKDAPIIILDEATSSIDPENEYLIQRAISNLSKGKTVIIIAHRIVTIEEAD QILVLDDGEIVQRGKHRDLIEEEGLYRSFMRIRGKVENWKI >gi|229269850|gb|GG666061.1| GENE 12 21563 - 22081 187 172 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227486059|ref|ZP_03916375.1| ## NR: gi|227486059|ref|ZP_03916375.1| hypothetical protein HMPREF0072_1462 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1462 [Anaerococcus lactolyticus ATCC 51172] # 1 172 1 172 172 325 100.0 6e-88 MVDTQQKKWWYWYKAKNSWCDFALEDFDLKNTSIEHGKWKTLVNIEKTKQEVKNKGFKVS KKTMHWSRKNYKEQQAYFSFFVFQNIRLPFIVSRYEPNQKLLCVNHINGSYRLGYVRIDA SYKDYQEMNTITKNDNGIIIEKGDKTCIKEIGIIGLDKELRFCEMVFKPVVK >gi|229269850|gb|GG666061.1| GENE 13 22182 - 22439 223 85 aa, chain + ## HITS:1 COG:no KEGG:Spirs_1377 NR:ns ## KEGG: Spirs_1377 # Name: not_defined # Def: cyclase family protein # Organism: S.smaragdinae # Pathway: not_defined # 1 79 1 85 248 77 43.0 1e-13 MINKLIEELKKLEWVDLTHSFDENSHRWKGFKPLKKIILDFNEYPVKAHEYTFLGQYGTH IDVPAHVDPDGMTLDKIELKRIVKE >gi|229269850|gb|GG666061.1| GENE 14 22461 - 22829 180 122 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1240 NR:ns ## KEGG: SEQ_1240 # Name: eqbG # Def: equibactin nonribosomal peptide synthase protein # Organism: S.equi_equi # Pathway: not_defined # 1 122 1147 1264 1272 100 43.0 1e-20 MLKHVNNCISDYIGLQKEHEKRLKTYAKIIYQERRFDHDFIFKTFNVHEKTLKSFNVNLS PYIGEVEVILNEKYMIDHDIAYDQIIKKWKEICFGILKSNEIKVNLGYCEEEIDSILLKS MI >gi|229269850|gb|GG666061.1| GENE 15 22843 - 23430 422 195 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1239 NR:ns ## KEGG: SEQ_1239 # Name: eqbH # Def: ABC transporter permease protein # Organism: S.equi_equi # Pathway: not_defined # 1 195 1 195 195 272 81.0 7e-72 MDNKLKGKDLITIGIYTAIYFVINFAFMVAGMIPVMWILMSALIALFTGIPYMMICNKVK KPGAILIMGTITVLIYYATGQFTTVILTTFVIGCILAEIIRKVTNYKSFLGNTLSFAFFS IGMIGSPLPIWLFKESFFAHIAEVGMSQDYINTLETFTSPVVLIGVFVLTLICAVLGSLF ARRIMKKYFKKAGIM >gi|229269850|gb|GG666061.1| GENE 16 23432 - 24103 283 223 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1238 NR:ns ## KEGG: SEQ_1238 # Name: eqbI # Def: ABC transporter permease protein # Organism: S.equi_equi # Pathway: ABC transporters [PATH:seu02010] # 1 223 1 223 223 265 69.0 1e-69 MNKDKLNLDPRAGIFLLFILNFTIFNVSKTSALFLLLLWSCIYAVYNGFYKISIKFVIAY LLFYGIEFFVLPKLPSLIAVSFAILLMYVLKMLSVALFGYTFVKTTSLYELISALRKMHF PESIITGLSITLRYFPALKEDYAKTRDTMKLKKMSTIDKLNGLIITTIMRATLNIEELSQ AATVRGIDNPVKRNSIIELHFKRRDLLVCVISFAFYALVYFRY >gi|229269850|gb|GG666061.1| GENE 17 24118 - 25491 278 457 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 262 454 2 209 245 111 30 5e-24 MIELKDVSYSYSEEEQIVKNLNLKIQDGECILLCGRSGCGKTTIGRIINNLIPRFFENGR MKGEVYIDDKNTNQFEMYELSRLIGTVFQNPKAQFFHTNSDAEIVFGLENSGMESEEIIK SYKKAVDELNIQNLTNKNMFLMSGGEKQIIAFASIYAMNPKVYVLDEPTANIDKTTILKI REIIEKLKEAGHTIIICEHRLYFLKDLVDRVLYVDKGVIKQSFSGNDFFKLDDKKRISMG LRSLEEPTLKTETKQNTSNNSLKIENLSCNYGEKKVFENLNLGVNEGEILGIIGKNGVGK TTLIRCIAGLHKQSEGQISLNGKVLNNKERQKLSAMVMQDVNYQLFTNNLVEECHLGNNC SDSQIEEVLKELGLIEFKELHPMVLSGGQKQRLVIGNAVLSDKQIFIFDEPTSGLDYEGM KVVSKELKKLSKNSYYIFIVSHDREFINATCDRVYEF >gi|229269850|gb|GG666061.1| GENE 18 25696 - 26745 446 349 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1234 NR:ns ## KEGG: SEQ_1234 # Name: eqbM # Def: oxidoreductase # Organism: S.equi_equi # Pathway: not_defined # 1 346 1 348 354 383 57.0 1e-105 MYKVGILGCSGNIGSIVLEEISKTEDNYIYAATRNERNIIKKNNIHHKIFDIENKDKLND FISKCQVVINCTGIKNANIINVCMENNVNYVDPSFFDLSETVELPKTKQNNCIIYSAGCN PGLTEVFIKYIDTEYSPHKLEIIFSGSGSMSKSAIEELLDISNEYKSSFRSFVRGNSIEK METWEIKRKLNHLSGDVICIPVINQSFFKCINSTDIKTAYFYNTFKSEKIILKLIEAKSI IEKDEKIYRNYISELIGLFEEESVGYNSSFTNYYCIFSNGLNYKKRITLESKLDWNKLTA VVITEVINLLKHNKNLKHGIGEVWEMFDAYEIIKVFLRNGYIKISNIRL >gi|229269850|gb|GG666061.1| GENE 19 26796 - 27713 451 305 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1233 NR:ns ## KEGG: SEQ_1233 # Name: eqbN # Def: hydrolase # Organism: S.equi_equi # Pathway: not_defined # 1 305 3 301 301 367 70.0 1e-100 MGYLIYGFVIFITMYFAMFFLVISIMHRKIFNKRIDYVNSGGLFSEVNQKSVFFDNADKK NDSFFRFGIFFYPKSPKNINENNHLIILVCGYEESYLDFKSEIFFWIENGYTVFCYDIKG TGKSTGKLIGGFTQFLEDSLLAIEYIEKNEKFNKVSLIGHSMGGFAVATSLKFKKNFIDN SVVISGFDYPSEFVRKSIASNFHIFFTWPIEITIKIIEFLKFGKLSFNKSIKSINNFNKP VLIIQSIDDMVVKISNSIYEKKEKITNKNVEYILLKNSDHNPTKNITGGLNIDLMNKINE FISNN >gi|229269850|gb|GG666061.1| GENE 20 27978 - 28490 316 170 aa, chain - ## HITS:1 COG:SP1433 KEGG:ns NR:ns ## COG: SP1433 COG2207 # Protein_GI_number: 15901285 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Streptococcus pneumoniae TIGR4 # 9 165 162 317 330 145 49.0 2e-35 MFFQSKNSIVNPISRIAKDILTCKLENIEAKIFFEEKVKEWFYITVDASEYSKKYRPLST EDEKLIENVERYISDHYSINIPQSLLEKIACMSGTKLKESFKKKNNLSITEFTQRKRMNV AEQLLLNTDLEIRYIAKTVGYTSPSRFSKLYKRFKGVYPREVKSIVNMAK >gi|229269850|gb|GG666061.1| GENE 21 28704 - 29243 428 179 aa, chain + ## HITS:1 COG:RSc1437 KEGG:ns NR:ns ## COG: RSc1437 COG2963 # Protein_GI_number: 17546156 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 1 179 1 175 177 83 33.0 2e-16 MPKYTKEFKIKLVLEYLSGKSGGYKAIAKKYDIPKDNLREWINKYKSRGFDSLSKKPKNN NYTSEFKLSVIQYRQINNTSLRETAEHFNLVNGSMVYRWEKAYRERGLSGLEDNRGRPKK DMTKSNKKSKINTPINESEREELIRLREENRLLKMKIIYEKKLQALLLEEEAEARKKQR >gi|229269850|gb|GG666061.1| GENE 22 29438 - 30100 245 220 aa, chain + ## HITS:1 COG:RSc2408 KEGG:ns NR:ns ## COG: RSc2408 COG2801 # Protein_GI_number: 17547127 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Ralstonia solanacearum # 3 216 64 272 278 208 52.0 8e-54 MVLKNKGFNVNHKRVLRIMREESLLCTKFKNRSRKYSSYKGQIGKVADNIVKIQFKATKP NQLWLTDVTEFRIKGQEKKLYLSPVLDVYNSEIVSYTLSYHPTIELTNTMIDKALRNTKN KHNLTLHSDQGFHYQHSSWTNKLEKMNIRQSMSRKGNCLDNSPMENFFGILKQEMFYGEE FKSYDHLISRIEKYIKWYNEDRIKTKLNGMSPVMYRLHSA >gi|229269850|gb|GG666061.1| GENE 23 30142 - 30993 654 283 aa, chain + ## HITS:1 COG:FN1726 KEGG:ns NR:ns ## COG: FN1726 COG0534 # Protein_GI_number: 19705047 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 3 275 175 448 457 131 30.0 2e-30 MGLGAFLNIILDSILMKLMGKYAIEGAALATITAQLVQAIITLLYFKYKSKAVKINKIQS DQEIKKEMFGVGSSAMMMQILLMIHQTILYKMAFKYGGDPNGILMAATLRIYAFSFIPLW GMSQGLQPVVGTNFGAKKYDRVKEAMKIFSIGGLVLALIFWIPALAFSKNILSLFGVEES IITQGIGNFRLFYSIFILYGVMVMTITFFQSIGSAKKAGIIVMLRQLFLFVPAMIILPMI FGVKAVWFAEPLVDLIMIIAGVVMMFEELNRMDKIGLKNSSNE >gi|229269850|gb|GG666061.1| GENE 24 31229 - 31639 402 136 aa, chain + ## HITS:1 COG:no KEGG:FMG_0934 NR:ns ## KEGG: FMG_0934 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 136 1 136 136 192 93.0 3e-48 MTKEYYLYVGGQKIKVSKQIYKVYWQEREHEKYLEQVDKKNHLLFFSSLNHDGNFENNLE DKNVDVEKVVATQMMIEALRNAMSKLNEEEREIIERLYFNDETLRAVAKTQNISHPALIK RRDKILEKLKKFIEEL >gi|229269850|gb|GG666061.1| GENE 25 32056 - 32212 120 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313888380|ref|ZP_07822048.1| ## NR: gi|313888380|ref|ZP_07822048.1| conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] conserved hypothetical protein [Peptoniphilus harei ACS-146-V-Sch2b] # 1 52 1 52 55 76 100.0 5e-13 MCDEHNINTEMKTDKKDKQMINQIDGWNIEVKFNENGFSLENLVEEYIKEKF Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:28 2011 Seq name: gi|229269849|gb|GG666062.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD19, whole genome shotgun sequence Length of sequence - 1705 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 137 - 1414 428 ## COG3547 Transposase and inactivated derivatives - Prom 1612 - 1671 4.4 Predicted protein(s) >gi|229269849|gb|GG666062.1| GENE 1 137 - 1414 428 425 aa, chain - ## HITS:1 COG:FN1676 KEGG:ns NR:ns ## COG: FN1676 COG3547 # Protein_GI_number: 19704997 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 6 406 3 386 391 145 29.0 1e-34 MSEKIVVGIDVSKAFSDICILSPNNDIIKRLKISNDITGMKSLIYVLEKVEDEYEDRAVI IMEATAHYHQILANFFRKHNYEVIVINPIQSGALKNINIRKIKSDKTDAYNIALLYRIKN YNETITHSDTVNSIKKLCRQHKELTDEIVEHINRLIAFLDISFPDFKKVFTDLQGKTPLS LLEKYPTIQEVLSPENKQDIIQLIKENSHKSSSYAEAKYEKLFKAAEKSIEVCIVSLSSA VLIQTTVRVIFSLQEALKAIDDEIKRLSLLDEKFHKEIVLLQSIPGVGEYTACVVLSELG DISDFSKPKELVAFFGLDPGVSQSGTYNRKNNKISKRGSPHVRSILHMLAKSNVYPNRNR EYLNPVMRAYFEKKIAEKPYKVVMCAIMRKMVQIIFAVLRNQKSFELRTPEEHQKLIREK SKLVA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:29 2011 Seq name: gi|229269848|gb|GG666063.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD20, whole genome shotgun sequence Length of sequence - 1640 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 301 - 339 2.6 1 1 Op 1 . - CDS 360 - 647 425 ## FMG_0916 hypothetical protein 2 1 Op 2 . - CDS 716 - 1288 521 ## PROTEIN SUPPORTED gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 - Prom 1312 - 1371 7.0 3 2 Tu 1 . - CDS 1403 - 1582 200 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member Predicted protein(s) >gi|229269848|gb|GG666063.1| GENE 1 360 - 647 425 95 aa, chain - ## HITS:1 COG:no KEGG:FMG_0916 NR:ns ## KEGG: FMG_0916 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 95 1 95 95 152 95.0 5e-36 MKKISANILDGKFEHLVDEDNLQITHLQIKKGEEIPNHKSDKSVVVVIYKGKVDFKGENG NQIIIPGDIITMDPNEIHALKALEDSDLMVIKVRI >gi|229269848|gb|GG666063.1| GENE 2 716 - 1288 521 190 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988990|ref|ZP_01820390.1| hypothetical protein CGSSp6BS73_02415 [Streptococcus pneumoniae SP6-BS73] # 6 189 7 191 192 205 50 2e-53 MKEKLIIKKLREDCRNEIYTNRGINPIFQLNPKSKILIIGQAPGERVEETGILFNDKSGE NLVKWLGISEDVLHSEDFSIIPMDFYYPGKGKSGDKAPRSFIAKEYHPLLLNELKDIKLT ILIGAYAQKFYLKDKFKKNLTETVKSYKEFLPEYFPIAHPSPLNNRWIAKNPFFREEVLP ELKKIVKNLR >gi|229269848|gb|GG666063.1| GENE 3 1403 - 1582 200 59 aa, chain - ## HITS:1 COG:AGpA164 KEGG:ns NR:ns ## COG: AGpA164 COG0507 # Protein_GI_number: 16119340 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 52 155 204 1609 61 56.0 3e-10 MAEKNSNAQLARQFIIGLPKELSLSENKNLVERFIKENLTSQGMIVDYAIHDESQDKNG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:32 2011 Seq name: gi|229269847|gb|GG666064.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD21, whole genome shotgun sequence Length of sequence - 1481 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 1371 1110 ## COG3666 Transposase and inactivated derivatives - Prom 1405 - 1464 2.6 Predicted protein(s) >gi|229269847|gb|GG666064.1| GENE 1 3 - 1371 1110 456 aa, chain - ## HITS:1 COG:SPy2013 KEGG:ns NR:ns ## COG: SPy2013 COG3666 # Protein_GI_number: 15675797 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Streptococcus pyogenes M1 GAS # 1 381 1 376 401 383 49.0 1e-106 MLYKNEKNNTEQVQMVSVEQLVPKDHILRKIDKYIDFNFIYDLVEDKYSQTTGRPSIDPV VLIKLVILQYFFNINSMRQTIREVEVNIAYRWFLGLDFYDKVPHFSTFGKNYERRFKNTD IFNQIFENILDQAMSYGFVDTKIQFVDSTHVKAHANRHKNQKVKIKKKVKSYQRKLEKEV NEDRNINGKDDFDYPKGEILEEKEISQSITDPESGLFHKGNHKEVYAYSIQTSCDKNGWI LGYKAYPGNLHDSTTFPSFFKEKIEKYEPEKIVMDAGYKIPAIAKELIEKGIMPVLPYAK PKGRRNDKESFYPRQYKYDETNDCYICPENKILLYSTTNREGYRIYQSKKSLCENCPSLS KCTKSKSKVKVIIRHIWQEYIDYSEWYRLTEEGKALYKLRKETIERQFGSAKEYHSFRYT NMIGKAKMSMKAALTFACLNMKKLAKLLDRLEGDGG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:33 2011 Seq name: gi|229269846|gb|GG666065.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD22, whole genome shotgun sequence Length of sequence - 1373 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 19 - 1188 785 ## COG3547 Transposase and inactivated derivatives Predicted protein(s) >gi|229269846|gb|GG666065.1| GENE 1 19 - 1188 785 389 aa, chain + ## HITS:1 COG:FN1357 KEGG:ns NR:ns ## COG: FN1357 COG3547 # Protein_GI_number: 19704692 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Fusobacterium nucleatum # 1 389 1 389 391 213 36.0 6e-55 MFYLGIDIGKNTHVASLVDDKKKVIFKAFSFSNSIDGAESLILKLEAFKNELEVGMEATG HYWLSLYSYLVEKNFTVRVINPIQTDGWRQGIEIRKRKTDIIDSLLIADLLRYGDFVETS LSNEDYLSLRNLSRFRSYLISSIGDLKRKTIALLDQVFPEYASSFSNIFGKTSKEILSNF STPSDFEDINSDDLNTFLESVSKKNYASKKIDELSKKASSSFGINLCLDSFSLQIKMLIE QISFIQNQVSNVENEIEVLLEKLNSPITTIPGIGSVNAATILGEIGDIKRFSNPSKLVAY AGLDARISQSGEYESTYNHMSKRGSPYLRRALFQSALRAEFCDPVFSDYYQKKISEGKHH LVATNAVARKLCHTIFAVLIKDEPYQVQN Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:34 2011 Seq name: gi|229269845|gb|GG666066.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD23, whole genome shotgun sequence Length of sequence - 1144 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 1, operones - 1 average op.length - 4.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 1 - 462 509 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 2 1 Op 2 . + CDS 444 - 638 132 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 3 1 Op 3 . + CDS 664 - 978 285 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 4 1 Op 4 . + CDS 908 - 1141 116 ## COG0050 GTPases - translation elongation factors Predicted protein(s) >gi|229269845|gb|GG666066.1| GENE 1 1 - 462 509 153 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 147 18 173 407 200 64 5e-90 IGHVDHGKTTTTAAITQALNKKYGTGEYIDYEHIDKAPEERERGITINTSVVEYETQKRH YAHIDAPGHADYVKNMITGAAQMDGAIIVVSAADGPMPQTREHILLARQVGIPKIAVFLN KEDQVDDPELIELVEMEVRDLLNEYDFEATTAQ >gi|229269845|gb|GG666066.1| GENE 2 444 - 638 132 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 59 175 234 407 55 48 5e-90 GDNCPVIVGSALKSLQEGGEGPWSDKILALMDAVDEYFDIPERDNDQPFLMPVEDVMTIQ AVEQ >gi|229269845|gb|GG666066.1| GENE 3 664 - 978 285 104 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 86 250 334 407 114 61 5e-90 LKVGDTVEIVGLTEKTSQAVVTGVEMFHKSLDQAESGDNVGVLLRGVQRNEISRGQVLAK PGSVHPHTEFEGQVYVLTKEEGGRHTILLRLQTTILLQNNRCNR >gi|229269845|gb|GG666066.1| GENE 4 908 - 1141 116 77 aa, chain + ## HITS:1 COG:FN1555 KEGG:ns NR:ns ## COG: FN1555 COG0050 # Protein_GI_number: 19704887 # Func_class: J Translation, ribosomal structure and biogenesis # Function: GTPases - translation elongation factors # Organism: Fusobacterium nucleatum # 5 77 322 394 394 115 72.0 2e-26 MDVIPFFSGYRPQFFFRTTDVTGDIQLEDGVEMVMPGDNATFKITLQKPIALEEGLRFAV REGGRTVASGVVTKIVK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:35 2011 Seq name: gi|229269844|gb|GG666067.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD24, whole genome shotgun sequence Length of sequence - 1081 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 42 - 1080 864 ## COG0827 Adenine-specific DNA methylase Predicted protein(s) >gi|229269844|gb|GG666067.1| GENE 1 42 - 1080 864 346 aa, chain + ## HITS:1 COG:pli0004 KEGG:ns NR:ns ## COG: pli0004 COG0827 # Protein_GI_number: 18450290 # Func_class: L Replication, recombination and repair # Function: Adenine-specific DNA methylase # Organism: Listeria innocua # 1 85 632 720 756 63 40.0 5e-10 MDKKSEDVRRYISERAEFLGAIRLPNTTFKGAAGTEVTSDIIFLKKRDRLLKLDEDWVKL DKDEKGLIYNKYFVDNPKMVIGTMEEIPSRFGTSLACIENEDISLKERLKKAIKNIQGKY EEAQIDEQLGEETIPADDSVKNYSFALVDDEIYFRENSIMQKISLNEKDKDKVKEYLRLN ESLRKVITYQRENFSDEKIKKEQENLNNLYDNFSTKYGRINSKANKKLFREDANFSLIST LEKLDKEGNFIGKSDIFIKRTIKKAIVIDHVDKPIDALVLSISQKGKINFDYMEELTGKS RYKLIEELKGEIFLNLDSFEPNDIKPFKSAKDLGDFSRPYVSADEY Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:35 2011 Seq name: gi|229269843|gb|GG666068.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD25, whole genome shotgun sequence Length of sequence - 1000 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 81 - 999 752 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member Predicted protein(s) >gi|229269843|gb|GG666068.1| GENE 1 81 - 999 752 306 aa, chain + ## HITS:1 COG:SMb21087 KEGG:ns NR:ns ## COG: SMb21087 COG0507 # Protein_GI_number: 16264414 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Sinorhizobium meliloti # 3 172 88 251 1539 116 38.0 7e-26 MAEKNSNAQLARQFIIGLPKELSLSENKKLVERYIKENLTSQGMIVDYAIHDESQDKNGN IHCHIMTIMRPINEKGEFLAKSKKEYILDEKGEKILNKNGKPKTRKVELTTWNDKGNVEK WRENFSDLCNEYLAKNKIEKRVDHRSFKRQNSDYLPTIHLGSAASAMERKGIETDKGNYN REIRKYNELVKTIKEEIKTLKDWIGNLLDNLSTAYEKFKDIERDKVIDNPKLFNLTNYLL TYSEIQKEKSKYLKGYAKTNKEKYDFKKLTSAYSYLRKNNIETIGQLQTKIETLKSNSYK INKKAK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:36 2011 Seq name: gi|229269842|gb|GG666069.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD26, whole genome shotgun sequence Length of sequence - 951 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 951 567 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269842|gb|GG666069.1| GENE 1 3 - 951 567 316 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 1 267 1537 1809 3975 265 57.0 2e-69 GYDIDIQSFNQQFPDYYNDIYVFNKNLEINGAYQNLAHINEENKITFNINLSQEEKSKIE EIRDKKQVLSKLIDKDIKEKREYYFDPQNEEYLLLSKKIEDGLLKKPENIIDGKEGYKVE LILDVKGKSLKQNLRYNGYILNSNQAIKYKSYKDILSNLPYLLDDKHREVLLNGYLNQQI ENDRTRQEENPFKEGMSVRYKGKEYTITAINDNTSPKTIELEDSTGLMNGFITGSETILF NDYKNLDLEVYKSSEKEKQSIDKGELVEQISFEDIGNNNEEEVKKDKKTDRENIEGVSEV SLENYKIINEEENLSP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:42 2011 Seq name: gi|229269841|gb|GG666070.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD27, whole genome shotgun sequence Length of sequence - 948 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 205 177 ## Apre_1801 replication initiator A domain-containing protein + Prom 269 - 328 5.4 2 2 Tu 1 . + CDS 537 - 948 273 ## COG1484 DNA replication protein Predicted protein(s) >gi|229269841|gb|GG666070.1| GENE 1 2 - 205 177 67 aa, chain + ## HITS:1 COG:no KEGG:Apre_1801 NR:ns ## KEGG: Apre_1801 # Name: not_defined # Def: replication initiator A domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 1 66 79 152 257 95 81.0 5e-19 SEKANKLIAELDIKSGIGLIEKKRQGLGKPNRIYVKDFMSIFNNMELKNQEFEKQNSRSS IIEIQEI >gi|229269841|gb|GG666070.1| GENE 2 537 - 948 273 137 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 22 137 27 147 282 63 33.0 1e-10 MTSLKDFVLRENDIERNGHIYCKVCGKRVDGELLDLGFTKFIPRIKCECEIKRDKENAER EILTRISSLKRDCFSSPLQHQYTFEKFLNEKGQAYKVAYNYAKSFEQMKKDNVGLLFYGD VGSGKTYLACSIANELI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:44 2011 Seq name: gi|229269840|gb|GG666071.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD28, whole genome shotgun sequence Length of sequence - 910 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 682 765 ## HMPREF0837_11442 nickase (EC:3.1.21.-) 2 1 Op 2 . + CDS 695 - 908 216 ## SPG_0961 nickase Predicted protein(s) >gi|229269840|gb|GG666071.1| GENE 1 2 - 682 765 226 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11442 NR:ns ## KEGG: HMPREF0837_11442 # Name: nic # Def: nickase (EC:3.1.21.-) # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 7 226 237 456 546 304 93.0 2e-81 SGKGKSAAASAMERKGIETDKGNYNREIRKYNELVKTIKEEIKTLKGWIENLLGNLSTAY EKFKDIERDKVIDNPKLFNLTNYLLTYSEIQKEKSKYLKGYAKTNKEKYDFKKLTSAYSY LRKNDIETIGQLQTKIESLKSNSYKLNIKAKTIHKEMEDVEKKILYYEIYKAKKEVYEEY QKKNLFTKDTFYNKHKKDINQYKVVSEKLKKLLSDKEKLSLKKWNE >gi|229269840|gb|GG666071.1| GENE 2 695 - 908 216 71 aa, chain + ## HITS:1 COG:no KEGG:SPG_0961 NR:ns ## KEGG: SPG_0961 # Name: not_defined # Def: nickase # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 71 462 532 546 108 98.0 6e-23 MANLEEINKEKDKIKDEYQEINHIKYSVDFVNKELGIDLSIEIDKLIKQGEKPSVIAQIK KFQDQVNKDNE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:51 2011 Seq name: gi|229269839|gb|GG666072.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD29, whole genome shotgun sequence Length of sequence - 906 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 905 665 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269839|gb|GG666072.1| GENE 1 2 - 905 665 301 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 27 164 1216 1341 3975 144 56.0 3e-33 FEEFKEFYTNKNKENIDIDLDSHIKYDYWIIEFNEGSSLIEKDYTGQRLTKELLDEIREI DEKIRLHNKTLGEDEYGQMTDKWEGYSKFYFNHIVDGKIVDYYKIGIGDGNEINQRDFEF LYEQIGKSQIELNQIIEENKIDEKIISIDQIEDRLFDVLVKDKVLENEIIKARENLGNNT LASFNSVFQREYAKIMREVADKQGNLPDDMKSIDKVKELGIRIENRYREYLNNSLKNNIE DDKEILSIKVGDIVRTEDNKYLKIKNISSGYDNNHNQITYYSYDAYFDKDLKLFSHSFKG S Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:04:57 2011 Seq name: gi|229269838|gb|GG666073.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD30, whole genome shotgun sequence Length of sequence - 905 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 904 651 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269838|gb|GG666073.1| GENE 1 1 - 904 651 301 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 27 125 1216 1314 3975 150 74.0 7e-35 FEEFKEFYTNKNKENIGFDLDRHIKYDYWIIEFNEGSSLIEKDYAGQRLTKELLDEIREI DEKIRLHNKTLGEDEYGQMTDKWEGYSKFYFNHIVDGKIVDHYKIDIGDGNEINQRDFEF LYEQIGKSQIELNQTIEENKIDEKIISIYQIEDRLFDVLVKDKVLENEIIKARENLGNST LASFNSIFQREYAKIMREVADKQENLPDDMKAIDKVKELGIRIENRYREYLNNSLENNIE DDKEILSIKVGDIVRTEDNKYLKIKDISSGYDNNHNPITYYSYDAYFDKDLKLFSHSFKE S Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:03 2011 Seq name: gi|229269837|gb|GG666074.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD31, whole genome shotgun sequence Length of sequence - 774 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 86 - 343 323 ## SPG_0961 nickase 2 1 Op 2 . + CDS 417 - 590 147 ## HMPREF0837_11441 hypothetical protein Predicted protein(s) >gi|229269837|gb|GG666074.1| GENE 1 86 - 343 323 85 aa, chain + ## HITS:1 COG:no KEGG:SPG_0961 NR:ns ## KEGG: SPG_0961 # Name: not_defined # Def: nickase # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 85 462 546 546 120 96.0 1e-26 MVKLEEINKEKDKIKDEYQEINHIKYSVDFVNKELGIDLSIEIDKLIKQGEKPSVIAQIK KFQDQVNKDNEYRESMKNKKMDQER >gi|229269837|gb|GG666074.1| GENE 2 417 - 590 147 57 aa, chain + ## HITS:1 COG:no KEGG:HMPREF0837_11441 NR:ns ## KEGG: HMPREF0837_11441 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_TCH8431-19A # Pathway: not_defined # 1 57 1 57 57 73 94.0 3e-12 MNKRQELIDELIKADQDGTYKTYKSTEELKAMNNEEIQIIYSNMKNYLSDKRTHINY Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:07 2011 Seq name: gi|229269836|gb|GG666075.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD32, whole genome shotgun sequence Length of sequence - 722 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 68 - 343 216 ## Poras_0418 RNA-directed DNA polymerase (Reverse transcriptase) - Prom 530 - 589 3.2 Predicted protein(s) >gi|229269836|gb|GG666075.1| GENE 1 68 - 343 216 91 aa, chain - ## HITS:1 COG:no KEGG:Poras_0418 NR:ns ## KEGG: Poras_0418 # Name: not_defined # Def: RNA-directed DNA polymerase (Reverse transcriptase) # Organism: P.asaccharolytica # Pathway: not_defined # 1 87 334 420 426 99 52.0 6e-20 MKSKLKGFSEHLRTRLRIICWKMWKVPKKRQWALRKMGVVKDLARLTSYCGNRYYFVATK TCLVRAITKERLSKTSLIDPYDYYISRTCVN Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:10 2011 Seq name: gi|229269835|gb|GG666076.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD33, whole genome shotgun sequence Length of sequence - 674 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 79 - 673 465 ## COG3505 Type IV secretory pathway, VirD4 components Predicted protein(s) >gi|229269835|gb|GG666076.1| GENE 1 79 - 673 465 198 aa, chain + ## HITS:1 COG:CAC1969 KEGG:ns NR:ns ## COG: CAC1969 COG3505 # Protein_GI_number: 15895240 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD4 components # Organism: Clostridium acetobutylicum # 3 197 355 552 591 103 36.0 2e-22 MKEDELELDTLGEKKTALFVIISDTDDTFNFVVSIMYSQLFNLLCDKADDEYGGRLPIHV RCLLDEFANIGLIPKFEKLIATIRSREISACIILQAQSQLKSIYKDNADTIVGNCDSTLF LGGKERTTLKELSESLGKETIDLYNTSETRSNQKSFGLNYQKTGKELMSQDEITVMDGGK CIYQLRGVRPFLSDKFDI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:10 2011 Seq name: gi|229269834|gb|GG666077.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD34, whole genome shotgun sequence Length of sequence - 565 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 62 - 121 6.5 1 1 Tu 1 . + CDS 147 - 564 259 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs Predicted protein(s) >gi|229269834|gb|GG666077.1| GENE 1 147 - 564 259 139 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 1 139 11 145 301 111 39.0 3e-25 MYLRLSKEDGEKTESNSISNQREIINSYARKNQITMIKEYVDDGYSGANFDRPNFKEMIK AAYDRKFNTIIVKDLSRFGRDYIEAGKYIQRIFPENGIRFISVNDNYDSKSADINDTHLI LPIKNFINDSYCRDISNKV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:11 2011 Seq name: gi|229269833|gb|GG666078.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD35, whole genome shotgun sequence Length of sequence - 544 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 438 374 ## MGAS10750_Spy1681 hypothetical protein + Term 474 - 524 7.9 Predicted protein(s) >gi|229269833|gb|GG666078.1| GENE 1 1 - 438 374 145 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1681 NR:ns ## KEGG: MGAS10750_Spy1681 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 145 17 161 161 175 99.0 6e-43 LAKATSKAILDALKKVHKQIEEQGGLKNVIKNNGEEVKLKDMVKKGQLEEINLKDPELKG LKKILNKHGVKFSVMKDKETGNHSVFFQSKDIKVMEHAFKKAVKASERKADRKDSITKTI NKFKDMAKDTISKDKVKNKHKEQSL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:14 2011 Seq name: gi|229269832|gb|GG666079.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD36, whole genome shotgun sequence Length of sequence - 544 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 542 141 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269832|gb|GG666079.1| GENE 1 2 - 542 141 180 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 3 179 380 557 3975 182 56.0 4e-45 PKATACAEFDYWKSIGRSVKRGEKGIPLLDIDSGRIKYIFDIRQTVSINHNISEVKLWKY DSKKHLNLLDELIDKFKEKDSKLLLSQEDKIDALVESNVRGKFNKILESLSDESLKSIQK VDLFNLLKESVKISISERMEVSYQLKEENLSLLSKISSSDIDKVLSISANISKNILLDLG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:18 2011 Seq name: gi|229269831|gb|GG666080.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD37, whole genome shotgun sequence Length of sequence - 544 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 542 56 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269831|gb|GG666080.1| GENE 1 2 - 542 56 180 aa, chain + ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 3 179 380 557 3975 182 55.0 5e-45 PKATACAEFDYWKSIGRSVKRGEKGIPLLDIDSGRIKYIFDIRQTVSINHSISEVKLWKY DSKKHLNLLDDLIDKFKEKDSNLLLSQEDKIDALVESNVRGKFNKIIESLSDESLKSIQK VDLFNLLKESVKISISERMEISYQLKEENLSLLSKISSSDVDKVLSISSNISKNILLDLG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:21 2011 Seq name: gi|229269830|gb|GG666081.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD38, whole genome shotgun sequence Length of sequence - 532 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 531 642 ## FMG_0958 putative chimeric erythrocyte-binding protein Predicted protein(s) >gi|229269830|gb|GG666081.1| GENE 1 3 - 531 642 176 aa, chain - ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 176 376 551 783 165 92.0 9e-40 NDEQIAEITQLKDELKRLQDENAKLKEDYSSTKWELEAEKEKTDKNENKIKEMQEKLESL EGELAKKTKEIEDKDNKIKGLEKALDEKDTKIKDLESKRKETEKTKSECCKKIGELQKAI DSLKESYENTKKELEEKIKELEEKQKAYEEEIKKLKEELDKKIEEAKKLIEEANKK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:27 2011 Seq name: gi|229269829|gb|GG666082.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD39, whole genome shotgun sequence Length of sequence - 520 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 519 310 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs Predicted protein(s) >gi|229269829|gb|GG666082.1| GENE 1 3 - 519 310 172 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 6 148 152 294 301 83 34.0 2e-16 SSQKIKREKGDFISAFAPYGYKKSENNKNKLVVDEQVANNIKNIFDMKLLGYSSKAIADE LNHLGVLTPRKYKESQGFKCNGFQNTKGGNWSAKTVNRIIENEVYIGNTLQGKSVTLSYK NKKQIEKEKEEWIRAENTHEAIISKEVFTIANTMLKRDLNNSRGKDKIDIFT Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:28 2011 Seq name: gi|229269828|gb|GG666083.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD40, whole genome shotgun sequence Length of sequence - 519 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 518 395 ## COG1961 Site-specific recombinases, DNA invertase Pin homologs Predicted protein(s) >gi|229269828|gb|GG666083.1| GENE 1 2 - 518 395 172 aa, chain + ## HITS:1 COG:lin1623 KEGG:ns NR:ns ## COG: lin1623 COG1961 # Protein_GI_number: 16800691 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinases, DNA invertase Pin homologs # Organism: Listeria innocua # 6 148 152 294 301 83 34.0 2e-16 SSQKIKREKGDFISAFAPYGYKKSEKNKNKLVIDEQVANNIKNIFDMKLLGYSSKAIADE LNNLGVLTPRKYKESQGFKCNGFQNTKGGTWSAKTVNRIIENEVYIGNTLQGKSVTLSYK NKKQIEKEKEEWIRVENTHEAIISKEVFTIANTMLKRDLNNSRGKDKIDIFT Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:29 2011 Seq name: gi|229269827|gb|GG666084.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD41, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 96 - 497 462 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269827|gb|GG666084.1| GENE 1 96 - 497 462 133 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 1 116 3839 3954 3975 167 75.0 1e-40 MNTYVDKSLIDSFQYTYDPLDASDLKELVQIKTSIGFWDFSELVSVNEEKLREVMGLEID DDGNFYDPLSKDMDLDGIIDRNDADFRDSKVQEIGDFERKEKTSIMDKLKEYKENLVVNN NIKEINNSEPCGR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:32 2011 Seq name: gi|229269826|gb|GG666085.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD42, whole genome shotgun sequence Length of sequence - 509 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 96 - 497 494 ## SEQ_1253 conjugative transposon DNA recombination protein Predicted protein(s) >gi|229269826|gb|GG666085.1| GENE 1 96 - 497 494 133 aa, chain - ## HITS:1 COG:no KEGG:SEQ_1253 NR:ns ## KEGG: SEQ_1253 # Name: not_defined # Def: conjugative transposon DNA recombination protein # Organism: S.equi_equi # Pathway: not_defined # 1 116 3839 3954 3975 166 74.0 2e-40 MNTYVDKNLIDSFQYTYDPLDASDLKELVQIKTSIGFWDFSELVSVNEEKLREVMGLEID DDGNFYDPLSKDMDLDGIIDRNDADFRDSKVQEIGDFEMKEKTSIMDKLKGYRENLAVNN NIKEINNSEPCGR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:35 2011 Seq name: gi|229269825|gb|GG666086.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD43, whole genome shotgun sequence Length of sequence - 508 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 506 233 ## COG4823 Abortive infection bacteriophage resistance protein Predicted protein(s) >gi|229269825|gb|GG666086.1| GENE 1 2 - 506 233 168 aa, chain - ## HITS:1 COG:lin2373 KEGG:ns NR:ns ## COG: lin2373 COG4823 # Protein_GI_number: 16801436 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Listeria innocua # 6 167 10 173 298 68 28.0 5e-12 HQEPITIENQVKNLIDLGLLVKDKTYAKKILGRISYYRLIKAYSITLKKDGRYISGISFE DIVSLYKFDRELRQLIFEIIEHIEVSLRAVITNYFSLKYGNFGYKDLSNVGKYKNRYKEA LNDLERETKRNRRSPFIKNFKDNYEGGEIPLYAVIEVASFGTLSKMYK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:36 2011 Seq name: gi|229269824|gb|GG666087.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD44, whole genome shotgun sequence Length of sequence - 505 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 503 269 ## COG4823 Abortive infection bacteriophage resistance protein Predicted protein(s) >gi|229269824|gb|GG666087.1| GENE 1 2 - 503 269 167 aa, chain - ## HITS:1 COG:lin2373 KEGG:ns NR:ns ## COG: lin2373 COG4823 # Protein_GI_number: 16801436 # Func_class: V Defense mechanisms # Function: Abortive infection bacteriophage resistance protein # Organism: Listeria innocua # 10 166 14 173 298 75 29.0 5e-14 HQEPISIENQVKNLIDLGLLVEDKTYAKKILGRISYYRLIKAYSITLKKDGRYISGISFE DIVSLYKFDRELRQLIFETIEHIEVSLRAVITNYFSLRYGNFSYKDMNNFEKQKEQERVL EELAREVKRNRRSPFIKNFKDNYEGGEIPLYAVIEVASFGTLSKMYK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:36 2011 Seq name: gi|229269823|gb|GG666088.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD45, whole genome shotgun sequence Length of sequence - 456 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 416 357 ## COG1484 DNA replication protein Predicted protein(s) >gi|229269823|gb|GG666088.1| GENE 1 3 - 416 357 137 aa, chain + ## HITS:1 COG:CAC1933 KEGG:ns NR:ns ## COG: CAC1933 COG1484 # Protein_GI_number: 15895206 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Clostridium acetobutylicum # 1 129 148 277 282 67 33.0 7e-12 REQVKVKIMNLSQVINQIQKSAFKVDSNEIIDNLSNIPLLILDDLGIERDTSYAREQVYN IINSRYLKGRPTIFTTNLSLEIIQNPNIDLEYQRIYSRILEMTIPVKVTGEDFRRKIHQE KLRKYKELLLYGGGIDD Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:37 2011 Seq name: gi|229269822|gb|GG666089.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD46, whole genome shotgun sequence Length of sequence - 450 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 448 336 ## FMG_0958 putative chimeric erythrocyte-binding protein Predicted protein(s) >gi|229269822|gb|GG666089.1| GENE 1 1 - 448 336 149 aa, chain + ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 149 560 708 783 184 93.0 7e-46 GKDEKEKNLNQDLSKKLDELLKLQKENKEKKEDKKPQDKKWDEILKADDKNILNQFDLNK MKENDKQQGKKQVKDEKEFAVFQVDKNFYNIINKDGKTTVYMDVKTYVDQGRTMIPVRYI AYTLGFNVEYDNSTREAIFSNKENNILAK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:41 2011 Seq name: gi|229269821|gb|GG666090.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD47, whole genome shotgun sequence Length of sequence - 440 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 438 458 ## MGAS10750_Spy1694 putative surface protein Predicted protein(s) >gi|229269821|gb|GG666090.1| GENE 1 3 - 438 458 145 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1694 NR:ns ## KEGG: MGAS10750_Spy1694 # Name: not_defined # Def: putative surface protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 145 564 708 783 183 97.0 2e-45 KDKNLNQDLSKKLDELLKLQKENKEKKEDKKSQDKKWDKLLKADDKNILNQFDLNKMKKQ DEQQDKKQAKDEKEFAVFQVDKNFYNIINKDGKTTVYMDVKTYVDQGRTMIPVRYIAYTL GFNVEYDNSTREAIFSNKENNILAK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:44 2011 Seq name: gi|229269820|gb|GG666091.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD48, whole genome shotgun sequence Length of sequence - 435 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 175 - 210 0.1 1 1 Tu 1 . - CDS 245 - 433 165 ## FMG_0970 hypothetical protein Predicted protein(s) >gi|229269820|gb|GG666091.1| GENE 1 245 - 433 165 62 aa, chain - ## HITS:1 COG:no KEGG:FMG_0970 NR:ns ## KEGG: FMG_0970 # Name: not_defined # Def: hypothetical protein # Organism: F.magna # Pathway: not_defined # 1 62 268 329 329 106 91.0 3e-22 KKYHDRYIAIDYGTGNEAFYLCGASSKDAGNKISSITKIEESSKDMYHDMFSKMLNNKDL KI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:47 2011 Seq name: gi|229269819|gb|GG666092.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD49, whole genome shotgun sequence Length of sequence - 435 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 39 - 434 344 ## FMG_0972 putative replisome organizer Predicted protein(s) >gi|229269819|gb|GG666092.1| GENE 1 39 - 434 344 131 aa, chain - ## HITS:1 COG:no KEGG:FMG_0972 NR:ns ## KEGG: FMG_0972 # Name: not_defined # Def: putative replisome organizer # Organism: F.magna # Pathway: not_defined # 1 131 103 237 237 147 60.0 1e-34 LYQTENGVYISEEKVGCHLVDQRLSSGQPSIDKGRLDKVSIDKGRGEQFTPIFYGEFKNV RLSKEEYENLKEKLSSHTEIMINKLSRYMESSGKTYQNHYATILKWYEEDKEKLRHQGGN KKMNYDVGESL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:50 2011 Seq name: gi|229269818|gb|GG666093.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD50, whole genome shotgun sequence Length of sequence - 430 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 91 - 315 233 ## gi|227486096|ref|ZP_03916412.1| hypothetical protein HMPREF0072_1499 - Prom 345 - 404 8.2 Predicted protein(s) >gi|229269818|gb|GG666093.1| GENE 1 91 - 315 233 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486096|ref|ZP_03916412.1| ## NR: gi|227486096|ref|ZP_03916412.1| hypothetical protein HMPREF0072_1499 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1499 [Anaerococcus lactolyticus ATCC 51172] # 1 74 1 74 74 83 100.0 6e-15 MTKRQTKYIVKRNYDNRRTDTDAFLRLIKKSSKLNKTNEIEYNKYNIDSNEKECYNKNSF RESCVISENSNKEE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:56 2011 Seq name: gi|229269817|gb|GG666094.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD51, whole genome shotgun sequence Length of sequence - 419 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 34 - 418 479 ## SPG_0962 hypothetical protein Predicted protein(s) >gi|229269817|gb|GG666094.1| GENE 1 34 - 418 479 128 aa, chain + ## HITS:1 COG:no KEGG:SPG_0962 NR:ns ## KEGG: SPG_0962 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 128 39 166 175 129 96.0 3e-29 MNETLEKANGNLKSLMGDEMKIKDLYKKGQLENISVDQSDLKDLKKELNKLGVSFSVMKN KESKNYEVFFQAKDIKVMEYAFKQVIAKENKKEKESILKQIKKYKDLSKNKDKTKEKVKR KVKEKVKP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:05:59 2011 Seq name: gi|229269816|gb|GG666095.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD52, whole genome shotgun sequence Length of sequence - 419 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 23 - 418 326 ## FMG_0972 putative replisome organizer Predicted protein(s) >gi|229269816|gb|GG666095.1| GENE 1 23 - 418 326 131 aa, chain - ## HITS:1 COG:no KEGG:FMG_0972 NR:ns ## KEGG: FMG_0972 # Name: not_defined # Def: putative replisome organizer # Organism: F.magna # Pathway: not_defined # 1 131 103 237 237 146 61.0 2e-34 LYQTENGAYISEEKVGCHLVDQRLSSGQPSIGKGRLDKISIDKVRGEQSTPIFYGEFKNV RLSKEEYKNLKEKLNSHTEIMINKLSRYMKSSGKTYQNHYATILKWYEEDKEKLTQKGLN KKMNYDVGESL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:02 2011 Seq name: gi|229269815|gb|GG666096.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD53, whole genome shotgun sequence Length of sequence - 377 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 20 - 79 3.5 1 1 Tu 1 . + CDS 102 - 375 263 ## MGAS10750_Spy1711 hypothetical protein Predicted protein(s) >gi|229269815|gb|GG666096.1| GENE 1 102 - 375 263 91 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1711 NR:ns ## KEGG: MGAS10750_Spy1711 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 91 35 125 152 157 100.0 2e-37 MDNRKRNNQLKIYLTDEEKEIFEKKMKLANCKTMSHFLRKCVLEKEIYVVDLEPFRNLQW LLSNATNNINQIAKATNTTGVIYKNEIESMN Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:05 2011 Seq name: gi|229269814|gb|GG666097.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD54, whole genome shotgun sequence Length of sequence - 331 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 330 241 ## gi|227486562|ref|ZP_03916878.1| hypothetical protein HMPREF0072_1965 Predicted protein(s) >gi|229269814|gb|GG666097.1| GENE 1 3 - 330 241 109 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227486562|ref|ZP_03916878.1| ## NR: gi|227486562|ref|ZP_03916878.1| hypothetical protein HMPREF0072_1965 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_1965 [Anaerococcus lactolyticus ATCC 51172] # 26 109 1 84 85 122 98.0 8e-27 GTDLSQKGITTTANSGYEFEQWNPTLGVVNQATEFTAKFKKKTTPPAPSGDTTDDVIPYL PGETVPTKGSDNKDIPATYITVTFKAEVIEGAAAGTVTVKGKTGAVVYA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:12 2011 Seq name: gi|229269813|gb|GG666098.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD55, whole genome shotgun sequence Length of sequence - 321 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 83 - 320 80 ## Apre_1758 relaxase/mobilization nuclease family protein Predicted protein(s) >gi|229269813|gb|GG666098.1| GENE 1 83 - 320 80 79 aa, chain + ## HITS:1 COG:no KEGG:Apre_1758 NR:ns ## KEGG: Apre_1758 # Name: not_defined # Def: relaxase/mobilization nuclease family protein # Organism: A.prevotii # Pathway: not_defined # 1 79 1 79 443 153 98.0 3e-36 MAITKIHPIKSTLNLAIDYITKSEKTDEKILVSSFKCHPSTAHIQFMKTREDNDTKGTVL ARHLIQSFLPGEVDPIKAH Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:14 2011 Seq name: gi|229269812|gb|GG666099.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD56, whole genome shotgun sequence Length of sequence - 317 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 176 168 ## FMG_0958 putative chimeric erythrocyte-binding protein + Term 255 - 302 5.7 Predicted protein(s) >gi|229269812|gb|GG666099.1| GENE 1 3 - 176 168 57 aa, chain + ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 56 710 765 783 103 96.0 2e-21 TLRLNIDTGVMKDSDGKVYNSDVKPVIINGRIHASISNIAKAFGASHGDIKDGKTKQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:17 2011 Seq name: gi|229269811|gb|GG666100.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD57, whole genome shotgun sequence Length of sequence - 302 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 301 258 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters Predicted protein(s) >gi|229269811|gb|GG666100.1| GENE 1 1 - 301 258 100 aa, chain - ## HITS:1 COG:SA2475 KEGG:ns NR:ns ## COG: SA2475 COG0619 # Protein_GI_number: 15928269 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Staphylococcus aureus N315 # 1 100 107 206 277 117 58.0 4e-27 RYALTLEQVFYEFNVALKYFSTIPLAIVFIFATDPSEFSSSLNRIGLSYKISYAVALALR YIPDIQKSYFDIRQASQARGIEMSEKAGLVKRIKASSNIV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:17 2011 Seq name: gi|229269810|gb|GG666101.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD58, whole genome shotgun sequence Length of sequence - 301 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 86 - 299 219 ## SPG_0961 nickase Predicted protein(s) >gi|229269810|gb|GG666101.1| GENE 1 86 - 299 219 71 aa, chain + ## HITS:1 COG:no KEGG:SPG_0961 NR:ns ## KEGG: SPG_0961 # Name: not_defined # Def: nickase # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 71 462 532 546 106 97.0 3e-22 MGKLEEINKEKDKIKDEYQEINHIKYSVDFVNKELGIDLSIEIDKLIKQGEKPSVIAQIK KFQDQVNKDNE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:19 2011 Seq name: gi|229269809|gb|GG666102.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD59, whole genome shotgun sequence Length of sequence - 294 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:20 2011 Seq name: gi|229269808|gb|GG666103.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD60, whole genome shotgun sequence Length of sequence - 272 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:20 2011 Seq name: gi|229269807|gb|GG666104.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD61, whole genome shotgun sequence Length of sequence - 258 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:20 2011 Seq name: gi|229269806|gb|GG666105.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD62, whole genome shotgun sequence Length of sequence - 250 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:21 2011 Seq name: gi|229269805|gb|GG666106.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD63, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 358 ## Predicted protein(s) >gi|229269805|gb|GG666106.1| GENE 1 1 - 241 358 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RRQPRRRCQCHARRRQPAGQPWADHRRRRPRGQRREPEQLRHPGRRRQPAIERARPAQRA RVAVQWRRHDPARRRHHQPL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:28 2011 Seq name: gi|229269804|gb|GG666107.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD64, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 5 - 239 233 ## COG0716 Flavodoxins Predicted protein(s) >gi|229269804|gb|GG666107.1| GENE 1 5 - 239 233 78 aa, chain + ## HITS:1 COG:PA3435 KEGG:ns NR:ns ## COG: PA3435 COG0716 # Protein_GI_number: 15598631 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Pseudomonas aeruginosa # 1 78 1 78 150 144 100.0 4e-35 MKVAILSGSVYGTAEEVARHAQKLLSAAGLEASHLPRASLDELKAFAPEAFLVVTSTTGM GELPDNLQPLYYAIRDQL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:28 2011 Seq name: gi|229269803|gb|GG666108.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD65, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 203 ## Predicted protein(s) >gi|229269803|gb|GG666108.1| GENE 1 1 - 241 203 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no VPVTRQFALIRVDHQIPHHRIEVQVEMGEHFAVDQQQREPDGGQRGGNKSQQPLRHHHEG EREDHQQIAGEHDKAEMPQQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:35 2011 Seq name: gi|229269802|gb|GG666109.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD66, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 240 294 ## AXYL_03282 type I phosphodiesterase/nucleotide pyrophosphatase family protein 2 Predicted protein(s) >gi|229269802|gb|GG666109.1| GENE 1 3 - 240 294 79 aa, chain - ## HITS:1 COG:no KEGG:AXYL_03282 NR:ns ## KEGG: AXYL_03282 # Name: not_defined # Def: type I phosphodiesterase/nucleotide pyrophosphatase family protein 2 # Organism: A.xylosoxidans # Pathway: not_defined # 18 79 468 529 530 108 85.0 7e-23 RDPGLRQPHPLPHAAGRGLRATVYDGARWGELYDLARDPHETRNLWDDPAHAGVRARLME RLAYGMLEHIDTSPYPTAL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:38 2011 Seq name: gi|229269801|gb|GG666110.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD67, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 10 - 241 298 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) Predicted protein(s) >gi|229269801|gb|GG666110.1| GENE 1 10 - 241 298 77 aa, chain + ## HITS:1 COG:PA4744 KEGG:ns NR:ns ## COG: PA4744 COG0532 # Protein_GI_number: 15599938 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Pseudomonas aeruginosa # 1 77 535 611 840 144 98.0 5e-35 MLVQDGTLRQGDMVLVGINYGRVRAMLDENGKPIKEAGPSIPVEILGLDGTPDAGDEMTV VADEKKAREVALFRQGK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:38 2011 Seq name: gi|229269800|gb|GG666111.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD68, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 56 - 239 305 ## nfa27800 putative transporter Predicted protein(s) >gi|229269800|gb|GG666111.1| GENE 1 56 - 239 305 61 aa, chain + ## HITS:1 COG:no KEGG:nfa27800 NR:ns ## KEGG: nfa27800 # Name: not_defined # Def: putative transporter # Organism: N.farcinica # Pathway: not_defined # 1 60 261 319 451 79 70.0 4e-14 MTTGGYIQGYATDPAGPIGLERGPVLWAVAGSAVTWLLTTLLAGWLSDRIGRRTTYIIGW V Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:41 2011 Seq name: gi|229269799|gb|GG666112.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD69, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 198 210 ## gi|227485165|ref|ZP_03915481.1| hypothetical protein HMPREF0072_0568 Predicted protein(s) >gi|229269799|gb|GG666112.1| GENE 1 1 - 198 210 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485165|ref|ZP_03915481.1| ## NR: gi|227485165|ref|ZP_03915481.1| hypothetical protein HMPREF0072_0568 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0568 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 65 82 100.0 1e-14 RRPSPSVRCQPRSPSSARPSGGSRARPWPGRHDRASRAGCRRPSGGHRPSARPCALRARC DAPRP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:47 2011 Seq name: gi|229269798|gb|GG666113.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD70, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 241 324 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 Predicted protein(s) >gi|229269798|gb|GG666113.1| GENE 1 2 - 241 324 80 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 1 78 60 137 547 129 83 3e-31 IELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRG IDKAVVAAVTELKNISKPTA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:47 2011 Seq name: gi|229269797|gb|GG666114.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD71, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 311 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) Predicted protein(s) >gi|229269797|gb|GG666114.1| GENE 1 2 - 236 311 78 aa, chain - ## HITS:1 COG:ML0102 KEGG:ns NR:ns ## COG: ML0102 COG4799 # Protein_GI_number: 15826937 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Mycobacterium leprae # 1 78 284 361 517 113 65.0 8e-26 MHDIILRIFDDGTFHEIGAQVAHNVITGFSRVDGLPVGVVANQPTYLSGALDADSSDKAA HFVRLCDAFNIPLVFVVD Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:48 2011 Seq name: gi|229269796|gb|GG666115.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD72, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 169 ## Predicted protein(s) >gi|229269796|gb|GG666115.1| GENE 1 1 - 241 169 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no DRQIDIIGLQVRLAARKDFDQFGFGHYRLTSGASQPETARAEARAVQETTSSVRPITRTC CRSAVHAAARPAGWCRWKPK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:54 2011 Seq name: gi|229269795|gb|GG666116.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD73, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 228 ## COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II Predicted protein(s) >gi|229269795|gb|GG666116.1| GENE 1 2 - 239 228 79 aa, chain + ## HITS:1 COG:PA4198 KEGG:ns NR:ns ## COG: PA4198 COG0318 # Protein_GI_number: 15599393 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II # Organism: Pseudomonas aeruginosa # 1 79 252 330 540 159 100.0 2e-39 CLRRVDPQKVLTLIREHQVSHLCGAPIVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKV IGAVEEMGIRVTHVYGLTE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:06:55 2011 Seq name: gi|229269794|gb|GG666117.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD74, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 359 ## Predicted protein(s) >gi|229269794|gb|GG666117.1| GENE 1 1 - 241 359 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RRGGRPAGRQHRPGALLRVGHRALPSAGPRPLARTRPTRLRAVVRPRPAPARPGTVPVRH TAAYARTPAPAARGRADRRL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:02 2011 Seq name: gi|229269793|gb|GG666118.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD75, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:02 2011 Seq name: gi|229269792|gb|GG666119.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD76, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:03 2011 Seq name: gi|229269791|gb|GG666120.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD77, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 240 202 ## Predicted protein(s) >gi|229269791|gb|GG666120.1| GENE 1 3 - 240 202 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no DLGGIDLAAVHQLLPDRGVQHAGVDLAGLDPGYGGVVGAGVGDAGEELLGDDAVLLHEVA RHQAARGGGDRAEGEGLAL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:10 2011 Seq name: gi|229269790|gb|GG666121.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD78, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 210 ## c1656 dihydroxyacetone kinase subunit M Predicted protein(s) >gi|229269790|gb|GG666121.1| GENE 1 1 - 241 210 80 aa, chain + ## HITS:1 COG:no KEGG:c1656 NR:ns ## KEGG: c1656 # Name: ycgC # Def: dihydroxyacetone kinase subunit M # Organism: E.coli_CFT073 # Pathway: not_defined # 1 79 39 117 474 68 59.0 7e-11 GVDAEGAPILGTDAVAVAAAIDELAADCDGVLVLMDLGSAVLSAELAVELRSSEVPVRLA PAPFVEGLLAAVVSAAAGGS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:13 2011 Seq name: gi|229269789|gb|GG666122.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD79, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 226 ## Predicted protein(s) >gi|229269789|gb|GG666122.1| GENE 1 3 - 240 226 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VFRQRIDLALVLQGDALLAVVLAADAEAFLVVAGCRPHFQLLRAGLGAQRDADHGDPAAA FLAHHQHRLALVEGPRRRA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:19 2011 Seq name: gi|229269788|gb|GG666123.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD80, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 197 ## Predicted protein(s) >gi|229269788|gb|GG666123.1| GENE 1 2 - 239 197 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VQASGPVRRPAVHLQGDGGAHAVAGRHRRAGLAAGDRSDREGADEHRRVRVHPLVFAPGR IAGHLHGPRQPAFQADSGP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:26 2011 Seq name: gi|229269787|gb|GG666124.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD81, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 341 ## Predicted protein(s) >gi|229269787|gb|GG666124.1| GENE 1 1 - 241 341 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no LRPAPGAAAAGVGAGFRTCRGRHAGHGRRRRSGRRAAPPSAVVRPPGPVRRSGCAAPGRI RGARAGRGPASDAVPATAPG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:33 2011 Seq name: gi|229269786|gb|GG666125.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD82, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 25 - 241 250 ## COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase Predicted protein(s) >gi|229269786|gb|GG666125.1| GENE 1 25 - 241 250 72 aa, chain + ## HITS:1 COG:YPO2021 KEGG:ns NR:ns ## COG: YPO2021 COG2877 # Protein_GI_number: 16122264 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase # Organism: Yersinia pestis # 1 72 181 252 284 137 90.0 7e-33 MLGINVMKNVTGGHPVIFDVTHALQTRDPFGAASGGRRAQVAELARAGMAVGLAGLFLEA HPDPNNAKCDGP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:34 2011 Seq name: gi|229269785|gb|GG666126.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD83, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 168 ## Predicted protein(s) >gi|229269785|gb|GG666126.1| GENE 1 2 - 239 168 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VEDRLDVGQGGAGVDGQFAAAVTDVGGVAAGAIQPDPGFAGRLAGFPAQAGVGELAVVLL VEGEAARQAQFAALPVAQG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:41 2011 Seq name: gi|229269784|gb|GG666127.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD84, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:41 2011 Seq name: gi|229269783|gb|GG666128.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD85, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:41 2011 Seq name: gi|229269782|gb|GG666129.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD86, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 97 ## Predicted protein(s) >gi|229269782|gb|GG666129.1| GENE 1 1 - 241 97 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no GPGWRAIRAISAANSFNTPSTNTTAASLGRGRFPRSGGNSLRRLADVQAEPLFRELGEAA VGLDLLQRRVQRLAELRIVL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:48 2011 Seq name: gi|229269781|gb|GG666130.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD87, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 18 - 240 229 ## RSP_0696 cbb3-type cytochrome c oxidase subunit I Predicted protein(s) >gi|229269781|gb|GG666130.1| GENE 1 18 - 240 229 74 aa, chain + ## HITS:1 COG:no KEGG:RSP_0696 NR:ns ## KEGG: RSP_0696 # Name: ccoN # Def: cbb3-type cytochrome c oxidase subunit I # Organism: R.sphaeroides # Pathway: Oxidative phosphorylation [PATH:rsp00190]; Metabolic pathways [PATH:rsp01100] # 1 74 1 74 535 141 100.0 1e-32 MWDYVKLVALGVIALCAAIAANYARDLAYMVNAVSVMLVAGGLFLWQVRRVGDEVRPKPA LQTEYMDGVIRYGV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:51 2011 Seq name: gi|229269780|gb|GG666131.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD88, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:51 2011 Seq name: gi|229269779|gb|GG666132.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD89, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:52 2011 Seq name: gi|229269778|gb|GG666133.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD90, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 234 420 ## Predicted protein(s) >gi|229269778|gb|GG666133.1| GENE 1 1 - 234 420 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no PLLAWRDFAHFAGGPGAGGPRRTARGPPRRRRQRRAEHRRAGRAGLAGRRHRPRRGRRQP GQQPQGRWSGRALPAHR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:07:59 2011 Seq name: gi|229269777|gb|GG666134.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD91, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 131 ## gi|227485166|ref|ZP_03915482.1| hypothetical protein HMPREF0072_0569 Predicted protein(s) >gi|229269777|gb|GG666134.1| GENE 1 2 - 239 131 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485166|ref|ZP_03915482.1| ## NR: gi|227485166|ref|ZP_03915482.1| hypothetical protein HMPREF0072_0569 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0569 [Anaerococcus lactolyticus ATCC 51172] # 1 79 1 79 80 105 98.0 8e-22 LQAGVRPAVRQPLRLPPPGAGRGHLQGRVQALSGNAGRRQAVLHPGRCGALRTVRGQHLL GHPWWRAGAGVPGVRRLQA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:06 2011 Seq name: gi|229269776|gb|GG666135.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD92, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 132 ## COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing Predicted protein(s) >gi|229269776|gb|GG666135.1| GENE 1 1 - 241 132 80 aa, chain - ## HITS:1 COG:PA5181 KEGG:ns NR:ns ## COG: PA5181 COG0243 # Protein_GI_number: 15600374 # Func_class: C Energy production and conversion # Function: Anaerobic dehydrogenases, typically selenocysteine-containing # Organism: Pseudomonas aeruginosa # 1 80 589 668 773 168 98.0 2e-42 VADTIPGFADFNRRVRHPGGFYLGNSAGERRWNTASGKANFVANPLPRDLLPAQVRDSGL EPDLILQTLRSHDQYNTTIY Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:06 2011 Seq name: gi|229269775|gb|GG666136.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD93, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 245 ## Predicted protein(s) >gi|229269775|gb|GG666136.1| GENE 1 1 - 241 245 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no LRVEPGEGLVEVVEGLVGRIDEMRGDALDFRLGEGARSVLEVGPFGLDALGEDFRGQRLD QDLDPRLVLVVAPAIAVVDA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:13 2011 Seq name: gi|229269774|gb|GG666137.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD94, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 241 121 ## Predicted protein(s) >gi|229269774|gb|GG666137.1| GENE 1 1 - 241 121 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no DHRFVVAADVGRIDRQVRHFPDRVFLLLGEALANGILVRAGESGMNQVADIWMARVDRQL VALFDHLAHRVDVGEVQLRM Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:20 2011 Seq name: gi|229269773|gb|GG666138.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD95, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 247 ## Predicted protein(s) >gi|229269773|gb|GG666138.1| GENE 1 3 - 240 247 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VGRRFVIERERSEGDEPGTGKPQRVGDLGARGHGPPLGRERREARGPGVCGRTDLGERRA DGDDPVSAPQPGERMPGVG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:27 2011 Seq name: gi|229269772|gb|GG666139.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD96, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 233 207 ## COG0763 Lipid A disaccharide synthetase Predicted protein(s) >gi|229269772|gb|GG666139.1| GENE 1 2 - 233 207 77 aa, chain - ## HITS:1 COG:PA3643 KEGG:ns NR:ns ## COG: PA3643 COG0763 # Protein_GI_number: 15598839 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipid A disaccharide synthetase # Organism: Pseudomonas aeruginosa # 1 77 92 168 378 166 100.0 1e-41 MIGIDAPDFTLGVEHKLRQAGLRTVHYVSPSVWAWRQKRVLKIREACDLMLALFPFEARF YEEHGVPVRFVGHPLAN Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:27 2011 Seq name: gi|229269771|gb|GG666140.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD97, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 31 - 240 128 ## Predicted protein(s) >gi|229269771|gb|GG666140.1| GENE 1 31 - 240 128 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no RSFQASTTRCTSSSETKAPCTRIGRPVPGGRLEHVAVAEKLFGATLVEDGARVDLAGDLE GDTGSGCWP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:33 2011 Seq name: gi|229269770|gb|GG666141.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD98, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 229 141 ## gi|227485234|ref|ZP_03915550.1| hypothetical protein HMPREF0072_0637 Predicted protein(s) >gi|229269770|gb|GG666141.1| GENE 1 2 - 229 141 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485234|ref|ZP_03915550.1| ## NR: gi|227485234|ref|ZP_03915550.1| hypothetical protein HMPREF0072_0637 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0637 [Anaerococcus lactolyticus ATCC 51172] # 32 75 1 44 44 86 97.0 7e-16 QHLAGGRALKHVGAADQRAFAGAGRADNAIDLPGRDVKGHVRERGNGARTLLEHFSDVRK FNHYSSYLAWLPVAR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:40 2011 Seq name: gi|229269769|gb|GG666142.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD99, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:40 2011 Seq name: gi|229269768|gb|GG666143.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD100, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 211 172 ## Predicted protein(s) >gi|229269768|gb|GG666143.1| GENE 1 1 - 211 172 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQVAGVQHGDAAGEVDVLAAFHVPDGGVLGALGDDRVDLAHAAGYRGLATLQQGFVGLAH GFLSGRSSGR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:46 2011 Seq name: gi|229269767|gb|GG666144.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD101, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:47 2011 Seq name: gi|229269766|gb|GG666145.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD102, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 117 ## Smlt3742 putative glycoside hydrolase Predicted protein(s) >gi|229269766|gb|GG666145.1| GENE 1 2 - 239 117 79 aa, chain + ## HITS:1 COG:no KEGG:Smlt3742 NR:ns ## KEGG: Smlt3742 # Name: not_defined # Def: putative glycoside hydrolase # Organism: S.maltophilia # Pathway: not_defined # 1 79 40 118 593 161 97.0 1e-38 FCALLGPNQQTGGDFAIELEDFADSEQEYLTNTAILRTVLRDTHGGALEILDFAPRWRQN DRFYRPVSLIRQVRPLAGS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:50 2011 Seq name: gi|229269765|gb|GG666146.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD103, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 239 195 ## Predicted protein(s) >gi|229269765|gb|GG666146.1| GENE 1 2 - 239 195 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPLWKMTSGVALDILSSPLERAQPCFLSGAWWRPGNCPSTWLTVFSLSQAAAKAVPLSS CLPTGMTCSPTRMPSRPIS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:08:56 2011 Seq name: gi|229269764|gb|GG666147.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD104, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 180 ## Predicted protein(s) >gi|229269764|gb|GG666147.1| GENE 1 1 - 241 180 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no GYQVHRFHAERREHQGEAEAGERRAGQADPGIRRAPQQQQAEAFDAEADDRHAEAAEPVD AIGEQQPGADEATAEGAQAE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:03 2011 Seq name: gi|229269763|gb|GG666148.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD105, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 230 401 ## Predicted protein(s) >gi|229269763|gb|GG666148.1| GENE 1 2 - 230 401 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAKFVPSRIDQAGHHDLPGVDAGHGPIGNSTRADGHVQYRYDGSMRATVMDAALDRLQAV GRAFDVLEKPLPVDEQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:09 2011 Seq name: gi|229269762|gb|GG666149.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD106, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 220 ## Predicted protein(s) >gi|229269762|gb|GG666149.1| GENE 1 3 - 240 220 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no EEQFLRQVGELAVIGQVLHVALALAVEWMEDAVGDAVELQRSDVEGAAQGTVERRGGLHP AALEVQLGIAVHGEHLAAQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:15 2011 Seq name: gi|229269761|gb|GG666150.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD107, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 307 ## Predicted protein(s) >gi|229269761|gb|GG666150.1| GENE 1 2 - 239 307 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no SGRGLQRVGTDFAGADADDLFDGGDEDLAVTDLAGACRRLDRFDHRIGTFVGDHGFDLDL GQEIDDVLGAAIQLGVALL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:22 2011 Seq name: gi|229269760|gb|GG666151.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD108, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 241 236 ## Predicted protein(s) >gi|229269760|gb|GG666151.1| GENE 1 1 - 241 236 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no EARLQRGVHAHVEPGFDGARHELHRHGVDQGAGHHADQGERQGEARRQPRAELAPADLPG QPHGQRHHPDEERQRENPVQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:29 2011 Seq name: gi|229269759|gb|GG666152.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD109, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:30 2011 Seq name: gi|229269758|gb|GG666153.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD110, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 224 275 ## Predicted protein(s) >gi|229269758|gb|GG666153.1| GENE 1 3 - 224 275 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no TAVVEAIDWTAAPEQTHAPVADSDAPLATTASDTSPAVVTATDATADSDDAAAAVTHDGA RADDADESPSITR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:36 2011 Seq name: gi|229269757|gb|GG666154.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD111, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 200 ## Predicted protein(s) >gi|229269757|gb|GG666154.1| GENE 1 3 - 240 200 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no EAHLVAAFLVARHDLRRSDDALLEVGMAGEEGLLGGEGALARLRAAIVVQARRIDPLPGP CRCVARGRPASAGTGRGFR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:43 2011 Seq name: gi|229269756|gb|GG666155.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD112, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:43 2011 Seq name: gi|229269755|gb|GG666156.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD113, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 238 100 ## COG0735 Fe2+/Zn2+ uptake regulation proteins Predicted protein(s) >gi|229269755|gb|GG666156.1| GENE 1 2 - 238 100 78 aa, chain + ## HITS:1 COG:PA4764 KEGG:ns NR:ns ## COG: PA4764 COG0735 # Protein_GI_number: 15599958 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Pseudomonas aeruginosa # 1 78 57 134 134 144 100.0 5e-35 VLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRE RGFELVDHNLVLYVRKKK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:44 2011 Seq name: gi|229269754|gb|GG666157.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD114, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 240 148 ## Predicted protein(s) >gi|229269754|gb|GG666157.1| GENE 1 3 - 240 148 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no SAPGNPDRSCPARNPSRRRPCLPATRWRSRAGAEAGWEPLPPVPRGTTGRRACRGSRPGA GRRVRGLPGRSRAMARSLP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:51 2011 Seq name: gi|229269753|gb|GG666158.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD115, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 13 - 210 149 ## gi|227485231|ref|ZP_03915547.1| hypothetical protein HMPREF0072_0634 Predicted protein(s) >gi|229269753|gb|GG666158.1| GENE 1 13 - 210 149 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485231|ref|ZP_03915547.1| ## NR: gi|227485231|ref|ZP_03915547.1| hypothetical protein HMPREF0072_0634 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0634 [Anaerococcus lactolyticus ATCC 51172] # 1 65 5 69 69 112 100.0 1e-23 MASSKEQAINGINDVILNSSAPDNIKKDLYGKAAMVFNDSFSYIGNENIEEVEYYQLHQD LLPLQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:56 2011 Seq name: gi|229269752|gb|GG666159.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD116, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:09:57 2011 Seq name: gi|229269751|gb|GG666160.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD117, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 266 ## gi|313110617|ref|ZP_07796495.1| putative hemagglutinin Predicted protein(s) >gi|229269751|gb|GG666160.1| GENE 1 3 - 240 266 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313110617|ref|ZP_07796495.1| ## NR: gi|313110617|ref|ZP_07796495.1| putative hemagglutinin [Pseudomonas aeruginosa 39016] putative hemagglutinin [Pseudomonas aeruginosa 39016] # 1 79 826 904 1224 66 94.0 7e-10 GFADQNAASALVEAFQVGVEQALGADPALLAVVQPGGHQGDAGVAADAAVAAVVQHAGAD IHRTLGADHAGTAVVEAGA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:03 2011 Seq name: gi|229269750|gb|GG666161.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD118, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 225 370 ## Predicted protein(s) >gi|229269750|gb|GG666161.1| GENE 1 3 - 225 370 74 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLQVTLEQQVGRLEADAPGGRGRQVAHVHREEVASGGQHVESPATRRAARTGRYEAPFE GCQQPVDLGPATGV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:10 2011 Seq name: gi|229269749|gb|GG666162.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD119, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 239 231 ## Predicted protein(s) >gi|229269749|gb|GG666162.1| GENE 1 2 - 239 231 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no LRGRQGHQPLPGTREPGRTPAGARQGQGRRPDRRSRSAPDRQQPSGSAHPQPDLADPAGE GPPRGAAAQQLRPRALRRA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:17 2011 Seq name: gi|229269748|gb|GG666163.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD120, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 8 - 239 225 ## Predicted protein(s) >gi|229269748|gb|GG666163.1| GENE 1 8 - 239 225 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALYAADGQLGAEGAAAAVLHHVADQAGARRFADDAPVQALAACGEAFDHRLGAVVGRAF LVAGDEEGDGTLVLRVV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:23 2011 Seq name: gi|229269747|gb|GG666164.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD121, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:24 2011 Seq name: gi|229269746|gb|GG666165.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD122, whole genome shotgun sequence Length of sequence - 241 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 15 - 240 243 ## COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes Predicted protein(s) >gi|229269746|gb|GG666165.1| GENE 1 15 - 240 243 75 aa, chain + ## HITS:1 COG:PA5394 KEGG:ns NR:ns ## COG: PA5394 COG1502 # Protein_GI_number: 15600587 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes # Organism: Pseudomonas aeruginosa # 1 75 355 429 490 144 100.0 6e-35 MAALRLAVLRGVDVRLLIPSRPDHRTVYAASSLYALEAIRAGVKVFRYQPGFLHQKVVLV DRDTAAVGSANLDNR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:24 2011 Seq name: gi|229269745|gb|GG666166.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD123, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 5 - 238 326 ## Predicted protein(s) >gi|229269745|gb|GG666166.1| GENE 1 5 - 238 326 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no RLSRRPAAKRRRGCPAGRPRASAASIRVCSSAERARYSASSTSRSRRCASMSSKGRASMS ISRARPAPRCSAVTSKK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:30 2011 Seq name: gi|229269744|gb|GG666167.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD124, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 238 153 ## gi|227485222|ref|ZP_03915538.1| hypothetical protein HMPREF0072_0625 Predicted protein(s) >gi|229269744|gb|GG666167.1| GENE 1 1 - 238 153 79 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485222|ref|ZP_03915538.1| ## NR: gi|227485222|ref|ZP_03915538.1| hypothetical protein HMPREF0072_0625 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0625 [Anaerococcus lactolyticus ATCC 51172] # 1 65 1 65 79 82 100.0 7e-15 DCLAGRARRRFGRSALGSASREREEGDCDHCCEAGKVLRGVHDGVFHRSSAAEPPASGGA AAVEDGEGIGWRRRRGQRQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:36 2011 Seq name: gi|229269743|gb|GG666168.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD125, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 238 100 ## Predicted protein(s) >gi|229269743|gb|GG666168.1| GENE 1 1 - 238 100 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no CSLKIATRTLAPVTSRLPELCTWNTARCRTRWKPSVGWVSRSSSCCGISGVVESMNSCRS RRSLSRLAPHARNTVAAAS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:42 2011 Seq name: gi|229269742|gb|GG666169.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD126, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 240 67 ## Predicted protein(s) >gi|229269742|gb|GG666169.1| GENE 1 3 - 240 67 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no VDEVVEGVLLVQQLAVLVPVAAHFLATTDVGNGIHHATVEQAHRGLVEVRVHRHAVAAIG VLEQRALAVLLVALAVDQR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:48 2011 Seq name: gi|229269741|gb|GG666170.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD127, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 254 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) Predicted protein(s) >gi|229269741|gb|GG666170.1| GENE 1 2 - 239 254 79 aa, chain + ## HITS:1 COG:PA1739 KEGG:ns NR:ns ## COG: PA1739 COG0667 # Protein_GI_number: 15596936 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Pseudomonas aeruginosa # 16 59 1 43 323 76 84.0 1e-14 TGETALFRAFRRGRTMQHVRLGNSGLKVSRLCLGCMTYGDPAWRPWVLPRNGRVRSFARR WKPGSTSSTVPISIPPARV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:49 2011 Seq name: gi|229269740|gb|GG666171.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD128, whole genome shotgun sequence Length of sequence - 240 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 89 - 238 116 ## Predicted protein(s) >gi|229269740|gb|GG666171.1| GENE 1 89 - 238 116 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFGDVQAERRAEPRRGGQSRQGFRRTRGSPASAAACRANNAMGVIRRYS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:10:54 2011 Seq name: gi|229269739|gb|GG666172.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD129, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 239 234 ## Predicted protein(s) >gi|229269739|gb|GG666172.1| GENE 1 2 - 239 234 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no EQASVELAHLVDVRDLEVQARLDVGLDHPTEAQHDRALGLLDYVDAVPQDDGGDDTDDQS DQRLVAHQRLSLVRASCWR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:01 2011 Seq name: gi|229269738|gb|GG666173.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD130, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 300 ## Predicted protein(s) >gi|229269738|gb|GG666173.1| GENE 1 2 - 239 300 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RQPDRRRRGQQPFRAVGAQRIGEAGIGDAVAGLQPLDARAHRLHHARGLVAEPLGTARDK SRCENTCPRNSGRPPHAGP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:07 2011 Seq name: gi|229269737|gb|GG666174.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD131, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 221 222 ## Predicted protein(s) >gi|229269737|gb|GG666174.1| GENE 1 3 - 221 222 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ISARATACRRHAGCVCSAAPSQVARSSKTARSVAAYPGARDQPPERTDVHQHNPSDQLRR QLALFTTAGNPG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:13 2011 Seq name: gi|229269736|gb|GG666175.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD132, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 239 314 ## Predicted protein(s) >gi|229269736|gb|GG666175.1| GENE 1 2 - 239 314 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no SIRTPETHDKQLTEGAQSMNNIPPTPDTSNGSRTRFQARWARLPHWAQRTVQILVLGLCA RCGWRFGWLAGRNGPYGPC Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:20 2011 Seq name: gi|229269735|gb|GG666176.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD133, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 33 - 237 194 ## gi|227485204|ref|ZP_03915520.1| hypothetical protein HMPREF0072_0607 Predicted protein(s) >gi|229269735|gb|GG666176.1| GENE 1 33 - 237 194 68 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|227485204|ref|ZP_03915520.1| ## NR: gi|227485204|ref|ZP_03915520.1| hypothetical protein HMPREF0072_0607 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0607 [Anaerococcus lactolyticus ATCC 51172] # 1 68 1 68 69 105 100.0 1e-21 MPAAVFGYGCEDMRGAAAKSRALACHVLRAAIALKPVAVSGGRLLQVPAGSADHAQLAVL DDLHRDAC Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:25 2011 Seq name: gi|229269734|gb|GG666177.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD134, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 238 262 ## Predicted protein(s) >gi|229269734|gb|GG666177.1| GENE 1 1 - 238 262 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no GAGRRAGRLCGDPRQDHRGTDGHRLPRHPAYLSGGQQPRHDHRQRRRRDHRQRCRRGSRP ADAADAGHGPGAAEGTAVL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:32 2011 Seq name: gi|229269733|gb|GG666178.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD135, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:33 2011 Seq name: gi|229269732|gb|GG666179.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD136, whole genome shotgun sequence Length of sequence - 239 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 64 - 237 100 ## gi|227485200|ref|ZP_03915516.1| hypothetical protein HMPREF0072_0603 Predicted protein(s) >gi|229269732|gb|GG666179.1| GENE 1 64 - 237 100 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485200|ref|ZP_03915516.1| ## NR: gi|227485200|ref|ZP_03915516.1| hypothetical protein HMPREF0072_0603 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0603 [Anaerococcus lactolyticus ATCC 51172] # 1 57 1 57 57 87 98.0 3e-16 PRLVDAVFGNGLPDLLIPEPDQSGHPARLRNGLRGEKAPGRQASTPVPDTGQSAAHD Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:39 2011 Seq name: gi|229269731|gb|GG666180.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD137, whole genome shotgun sequence Length of sequence - 238 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 313 ## Predicted protein(s) >gi|229269731|gb|GG666180.1| GENE 1 2 - 236 313 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no VVAQEHRDDQQHHDPRPARIRQPARFRLGRRGRRREPGLARHMVDEGGEELLDDLVAAFE QHALAALGQLAAGHAGHG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:45 2011 Seq name: gi|229269730|gb|GG666181.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD138, whole genome shotgun sequence Length of sequence - 238 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:46 2011 Seq name: gi|229269729|gb|GG666182.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD139, whole genome shotgun sequence Length of sequence - 238 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 237 438 ## Predicted protein(s) >gi|229269729|gb|GG666182.1| GENE 1 3 - 237 438 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no RESFSTKGSTEVRQHAGDGRRHEGGNGTAQHRAQAELGQVVATFRGQATDAADLDGDRAE VGKAAQCVGGDQATFVGQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:52 2011 Seq name: gi|229269728|gb|GG666183.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD140, whole genome shotgun sequence Length of sequence - 238 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 64 - 238 253 ## COG0807 GTP cyclohydrolase II Predicted protein(s) >gi|229269728|gb|GG666183.1| GENE 1 64 - 238 253 58 aa, chain + ## HITS:1 COG:PA4054_2 KEGG:ns NR:ns ## COG: PA4054_2 COG0807 # Protein_GI_number: 15599249 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase II # Organism: Pseudomonas aeruginosa # 1 52 51 102 160 102 100.0 1e-22 MDPLRDLLQVNQPGRWSLRAAMTKVAEAGSGVVLLLGHQIGGDDLLAHVREIASAPAP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:53 2011 Seq name: gi|229269727|gb|GG666184.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD141, whole genome shotgun sequence Length of sequence - 238 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 237 241 ## Predicted protein(s) >gi|229269727|gb|GG666184.1| GENE 1 3 - 237 241 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no RDPAARADPGRHGADQYQLRPGSQAEPDQGCAGHRRQRLALREHPRRAAGQQGQRRHAEA GQGPAQRRDQAVHPGEVQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:11:59 2011 Seq name: gi|229269726|gb|GG666185.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD142, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 186 ## Predicted protein(s) >gi|229269726|gb|GG666185.1| GENE 1 2 - 236 186 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no GAVAGNRPRGAAPRLRGNPRIPRAQRSLSGRALPEGALWPDRRLGGGRASRQPVAAPATA GAGNGPARRRQAGGQRLS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:06 2011 Seq name: gi|229269725|gb|GG666186.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD143, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 174 ## RHA1_ro07085 major facilitator transporter Predicted protein(s) >gi|229269725|gb|GG666186.1| GENE 1 2 - 236 174 78 aa, chain - ## HITS:1 COG:no KEGG:RHA1_ro07085 NR:ns ## KEGG: RHA1_ro07085 # Name: not_defined # Def: major facilitator transporter # Organism: Rhodococcus_RHA1 # Pathway: not_defined # 2 77 125 200 438 73 56.0 2e-12 AAAASNLIVAIAPNLIIVLLARFLLGAAISAFWAMSITVAARLAGPENLGRGVMFTSAGV SLATVAGVPLGVMLSELV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:09 2011 Seq name: gi|229269724|gb|GG666187.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD144, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 235 116 ## COG0642 Signal transduction histidine kinase Predicted protein(s) >gi|229269724|gb|GG666187.1| GENE 1 1 - 235 116 78 aa, chain + ## HITS:1 COG:PA3078 KEGG:ns NR:ns ## COG: PA3078 COG0642 # Protein_GI_number: 15598274 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Pseudomonas aeruginosa # 26 78 1 53 431 102 100.0 1e-22 QHRRQGVRHPSDPYPAQRRLPAGAQMKRGLSLIPIVGGGVTLILAGVLLVYTRMLGDYGE TGALYLLSMMMEEEGLYF Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:09 2011 Seq name: gi|229269723|gb|GG666188.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD145, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 7 - 235 327 ## Predicted protein(s) >gi|229269723|gb|GG666188.1| GENE 1 7 - 235 327 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLGEHGIAMVAFGIHRVAPVGELRPHAVGQILVLRRRRPGWQARGVQAMGAEDLLEEHQV GTDAAHRFAQLRQDEA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:16 2011 Seq name: gi|229269722|gb|GG666189.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD146, whole genome shotgun sequence Length of sequence - 237 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 29 - 236 142 ## COG2133 Glucose/sorbosone dehydrogenases Predicted protein(s) >gi|229269722|gb|GG666189.1| GENE 1 29 - 236 142 69 aa, chain + ## HITS:1 COG:PA1112 KEGG:ns NR:ns ## COG: PA1112 COG2133 # Protein_GI_number: 15596309 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose/sorbosone dehydrogenases # Organism: Pseudomonas aeruginosa # 1 69 304 372 382 144 100.0 4e-35 MAFYDAQRFPAWQHNLFIGALATQELIRLQLDGDRIVHEERLLGDLGVRIRDVRQGPDGY LYLLTDQKD Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:16 2011 Seq name: gi|229269721|gb|GG666190.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD147, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 204 235 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) Predicted protein(s) >gi|229269721|gb|GG666190.1| GENE 1 1 - 204 235 67 aa, chain + ## HITS:1 COG:RSc2861_3 KEGG:ns NR:ns ## COG: RSc2861_3 COG1080 # Protein_GI_number: 17547580 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Ralstonia solanacearum # 1 64 492 555 569 72 65.0 2e-13 GGLAGDPFGAMLLAGLGVDELSMTPNDIPSVKARLRGTALADLQRLANAALDCETAEQVR ALDGAGA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:17 2011 Seq name: gi|229269720|gb|GG666191.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD148, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 234 100 ## 2 2 Tu 1 . + CDS 4 - 234 243 ## PROTEIN SUPPORTED gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 Predicted protein(s) >gi|229269720|gb|GG666191.1| GENE 1 3 - 234 100 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no VELQRVRRGVGGGIGQDLIGFALLPRQLLRLFRQHPIHEQLGVVEVARAFEDADAADFIA GAFARRDQLQRRALFLF >gi|229269720|gb|GG666191.1| GENE 2 4 - 234 243 77 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167854980|ref|ZP_02477755.1| 50S ribosomal protein L13 [Haemophilus parasuis 29755] # 1 77 237 313 346 98 57 6e-22 EKEQGAPLELISPCEGTGYEIGGVSILKGARNLDNAKLFVDWVLSKEAQELAWKQGKSYQ ILTNTTADTSPNSLKLD Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:23 2011 Seq name: gi|229269719|gb|GG666192.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD149, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 108 ## Predicted protein(s) >gi|229269719|gb|GG666192.1| GENE 1 2 - 236 108 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no AAYPGVARHPAVARRRRAGSACAGGQLAAPPSVPPRGAGQPDQPEKHRVPRRTVPAVHLA QSAAGRAVSGARRHHRGG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:30 2011 Seq name: gi|229269718|gb|GG666193.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD150, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 236 178 ## Predicted protein(s) >gi|229269718|gb|GG666193.1| GENE 1 2 - 236 178 78 aa, chain - ## HITS:0 COG:no KEGG:no NR:no VGERAAGAFEATGLVHRQQRLRAFADHALLQQHLGGGAGGTPATGGLVVGLVTRRFLLGH VREPGGRNAATIGTTRSG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:37 2011 Seq name: gi|229269717|gb|GG666194.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD151, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 177 115 ## gi|227485161|ref|ZP_03915477.1| hypothetical protein HMPREF0072_0564 Predicted protein(s) >gi|229269717|gb|GG666194.1| GENE 1 3 - 177 115 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|227485161|ref|ZP_03915477.1| ## NR: gi|227485161|ref|ZP_03915477.1| hypothetical protein HMPREF0072_0564 [Anaerococcus lactolyticus ATCC 51172] hypothetical protein HMPREF0072_0564 [Anaerococcus lactolyticus ATCC 51172] # 1 58 1 58 59 89 100.0 9e-17 MGGDQLPVDAVPEQCLDVLISPTRFGPKECQVLDVPAASAGCPACGPGRRPGSFGPAC Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:43 2011 Seq name: gi|229269716|gb|GG666195.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD152, whole genome shotgun sequence Length of sequence - 236 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 44 - 235 189 ## Predicted protein(s) >gi|229269716|gb|GG666195.1| GENE 1 44 - 235 189 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no VDRRAADAPAVHDLRQTDRQLDRIQRHQMTDHPATPGSAARSARILEHDNHTSSTITSSE RQT Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:48 2011 Seq name: gi|229269715|gb|GG666196.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD153, whole genome shotgun sequence Length of sequence - 235 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 191 87 ## Predicted protein(s) >gi|229269715|gb|GG666196.1| GENE 1 3 - 191 87 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ADVDPADVVGDEQHGTGQRPADLHQAEAEDPHQPTLPPVDHLGAEGRSPTRSSPQAEACR SG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:54 2011 Seq name: gi|229269714|gb|GG666197.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD154, whole genome shotgun sequence Length of sequence - 235 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:12:55 2011 Seq name: gi|229269713|gb|GG666198.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD155, whole genome shotgun sequence Length of sequence - 234 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 234 267 ## Predicted protein(s) >gi|229269713|gb|GG666198.1| GENE 1 3 - 234 267 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ASVVAGDERTHAAGEHLAEHHRDGDQGDRPGVLDEDLRVDQQADGDEEDRTEHVTDRLDQ SFDLHQLARLGHDRADQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:01 2011 Seq name: gi|229269712|gb|GG666199.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD156, whole genome shotgun sequence Length of sequence - 234 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 224 143 ## Predicted protein(s) >gi|229269712|gb|GG666199.1| GENE 1 3 - 224 143 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no GRREAVAVAIRISRDKARAVTDEVGGFVHHVPVVRASFTDDHKIRVDVGDGETGFVQLMD QRAFADHIGFFTS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:07 2011 Seq name: gi|229269711|gb|GG666200.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD157, whole genome shotgun sequence Length of sequence - 234 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 62 - 233 225 ## Predicted protein(s) >gi|229269711|gb|GG666200.1| GENE 1 62 - 233 225 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSGLFMANSPHAVPARSAWRPTALPDWPTLRAGVRRTDAAQQAARQFHRSSPHPAP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:13 2011 Seq name: gi|229269710|gb|GG666201.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD158, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 14 - 233 314 ## Predicted protein(s) >gi|229269710|gb|GG666201.1| GENE 1 14 - 233 314 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALEDQPPGCRHHPALRAHSGPDEPAVLHGPAHHSLRHRGGHRIHRAVDGGDAVITTSDR FPLGGVRGAGAAV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:20 2011 Seq name: gi|229269709|gb|GG666202.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD159, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 231 212 ## Predicted protein(s) >gi|229269709|gb|GG666202.1| GENE 1 3 - 231 212 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no LVVLDAEEVADPLAVVRRRLALAAEVLVELCAIDRQLPANLGNRAVMAAKQLEIGAQVLG HRWLQTDAMDAILASG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:26 2011 Seq name: gi|229269708|gb|GG666203.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD160, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 233 218 ## Predicted protein(s) >gi|229269708|gb|GG666203.1| GENE 1 2 - 233 218 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no RADQGAQPQAVAIQFGITADRHLAAAFQAGIHRPLGAYAGFGGRMVQRRQQRAGDAVVET AFNADRTLADRRQTLFG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:32 2011 Seq name: gi|229269707|gb|GG666204.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD161, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:32 2011 Seq name: gi|229269706|gb|GG666205.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD162, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 232 119 ## Spro_3966 short chain dehydrogenase Predicted protein(s) >gi|229269706|gb|GG666205.1| GENE 1 1 - 232 119 77 aa, chain - ## HITS:1 COG:no KEGG:Spro_3966 NR:ns ## KEGG: Spro_3966 # Name: not_defined # Def: short chain dehydrogenase # Organism: S.proteamaculans # Pathway: not_defined # 10 77 1 68 251 80 80.0 3e-14 DAARAGGGAVNGLLNGKRIVVTGAARGLGYSFATAIAAAGAQVVMCDILADELAASGAAL REQGAQVETQTIDLASP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:35 2011 Seq name: gi|229269705|gb|GG666206.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD163, whole genome shotgun sequence Length of sequence - 233 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 232 281 ## COG0527 Aspartokinases Predicted protein(s) >gi|229269705|gb|GG666206.1| GENE 1 1 - 232 281 77 aa, chain - ## HITS:1 COG:PA0904 KEGG:ns NR:ns ## COG: PA0904 COG0527 # Protein_GI_number: 15596101 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Pseudomonas aeruginosa # 12 77 1 66 412 121 100.0 3e-28 KGALHGIRRFEMALIVQKFGGTSVGTVERIEQVAEKVKKFREAGDDVVVVVSAMSGETNR LIGLANQIMEQPVPREL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:36 2011 Seq name: gi|229269704|gb|GG666207.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD164, whole genome shotgun sequence Length of sequence - 232 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 230 343 ## EpC_00930 glycosyl transferase, group 1 Predicted protein(s) >gi|229269704|gb|GG666207.1| GENE 1 2 - 230 343 76 aa, chain - ## HITS:1 COG:no KEGG:EpC_00930 NR:ns ## KEGG: EpC_00930 # Name: not_defined # Def: glycosyl transferase, group 1 # Organism: E.pyrifoliae # Pathway: not_defined # 1 76 190 265 388 124 72.0 1e-27 KGISVSLLMMQELLRRGHDVTLEVAGKGPDRAAFEALAARLQLGDRVTFSGYQDDVAGFF NRTHIYMSTPITEPFG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:38 2011 Seq name: gi|229269703|gb|GG666208.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD165, whole genome shotgun sequence Length of sequence - 232 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 20 - 230 359 ## COG0183 Acetyl-CoA acetyltransferase Predicted protein(s) >gi|229269703|gb|GG666208.1| GENE 1 20 - 230 359 70 aa, chain + ## HITS:1 COG:STM3982 KEGG:ns NR:ns ## COG: STM3982 COG0183 # Protein_GI_number: 16767252 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA acetyltransferase # Organism: Salmonella typhimurium LT2 # 1 70 270 339 387 126 85.0 1e-29 MAVVGCDPSIMGYGPVPASKLALKRAGLSVQDIDLFELNEAFAAQSLPCIKDLGLMDSLD DKINLNGGAI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:39 2011 Seq name: gi|229269702|gb|GG666209.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD166, whole genome shotgun sequence Length of sequence - 230 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 147 174 ## Predicted protein(s) >gi|229269702|gb|GG666209.1| GENE 1 1 - 147 174 48 aa, chain + ## HITS:0 COG:no KEGG:no NR:no TETVINNYYDGDSGNSNGNTASRDDSLGLVDDSDLGGGDYSDDDSTLI Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:44 2011 Seq name: gi|229269701|gb|GG666210.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD167, whole genome shotgun sequence Length of sequence - 229 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:45 2011 Seq name: gi|229269700|gb|GG666211.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD168, whole genome shotgun sequence Length of sequence - 229 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 228 200 ## Predicted protein(s) >gi|229269700|gb|GG666211.1| GENE 1 3 - 228 200 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no GRLRSGAGRRTSRGLAAKLAQRLAQLGRDVADHGQAKIVDIAEMPIEGVRIQARLAASSR ADGPQAAAAAAQAQG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:50 2011 Seq name: gi|229269699|gb|GG666212.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD169, whole genome shotgun sequence Length of sequence - 229 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:51 2011 Seq name: gi|229269698|gb|GG666213.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD170, whole genome shotgun sequence Length of sequence - 229 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 227 211 ## Predicted protein(s) >gi|229269698|gb|GG666213.1| GENE 1 2 - 227 211 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no APSCITAWRACPGHRTRRPAAASASANPGRGSKQTPSCHHATHRSAAWPPTAAPPGNPGC VPARPCSCAVAGFTY Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:13:58 2011 Seq name: gi|229269697|gb|GG666214.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD171, whole genome shotgun sequence Length of sequence - 228 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 226 440 ## Predicted protein(s) >gi|229269697|gb|GG666214.1| GENE 1 1 - 226 440 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no SSASSATPRPSNARTRRPRSSTRCSTSELSPKSCPLMAGAPCSALAAAYRLQRARPKPAR RHHRPASVQPHRARR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:03 2011 Seq name: gi|229269696|gb|GG666215.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD172, whole genome shotgun sequence Length of sequence - 228 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:04 2011 Seq name: gi|229269695|gb|GG666216.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD173, whole genome shotgun sequence Length of sequence - 227 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 225 300 ## BURPS1710b_2435 hypothetical protein Predicted protein(s) >gi|229269695|gb|GG666216.1| GENE 1 3 - 225 300 74 aa, chain - ## HITS:1 COG:no KEGG:BURPS1710b_2435 NR:ns ## KEGG: BURPS1710b_2435 # Name: not_defined # Def: hypothetical protein # Organism: B.pseudomallei_1710b # Pathway: not_defined # 2 74 740 812 1205 75 58.0 9e-13 GRAEQIGTAPRPVLERVLDEPGQRHHHPPLVPDAHHHVAAADLLDASPLTFNDHHIVQPD RLRHCDLQASDQIA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:06 2011 Seq name: gi|229269694|gb|GG666217.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD174, whole genome shotgun sequence Length of sequence - 227 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 226 207 ## Predicted protein(s) >gi|229269694|gb|GG666217.1| GENE 1 1 - 226 207 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no SGLRLRGRCHAIILRPYDLDTSGVQVAVLRIEEPLPELFAIVLRSMEVTQAGITVNCQHD RVVIISRHVHISPCC Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:12 2011 Seq name: gi|229269693|gb|GG666218.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD175, whole genome shotgun sequence Length of sequence - 226 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 225 265 ## FMG_0958 putative chimeric erythrocyte-binding protein Predicted protein(s) >gi|229269693|gb|GG666218.1| GENE 1 3 - 225 265 74 aa, chain - ## HITS:1 COG:no KEGG:FMG_0958 NR:ns ## KEGG: FMG_0958 # Name: not_defined # Def: putative chimeric erythrocyte-binding protein # Organism: F.magna # Pathway: not_defined # 1 74 376 449 783 86 95.0 3e-16 NDELIAEITQLKDELKRLQDENAKLKENYSSTKWELESEKEKTDKNENKIKEMQEKLESL EGELAKNTKEIEDK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:15 2011 Seq name: gi|229269692|gb|GG666219.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD176, whole genome shotgun sequence Length of sequence - 225 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 223 235 ## Predicted protein(s) >gi|229269692|gb|GG666219.1| GENE 1 1 - 223 235 74 aa, chain + ## HITS:0 COG:no KEGG:no NR:no QPAQEHEDHRHHQADGEDQGELHFMHRGADGLGAVVEDLQVHVGRQHALQLRQDRADALD GLHDVGARLPAHFQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:21 2011 Seq name: gi|229269691|gb|GG666220.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD177, whole genome shotgun sequence Length of sequence - 225 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 19 - 219 326 ## Predicted protein(s) >gi|229269691|gb|GG666220.1| GENE 1 19 - 219 326 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MASEMQCTLPTSALPKAMPAIRLATSICSRACRLPGSSTAGLRYWLIRRMACSASPSLIG FDTRQV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:27 2011 Seq name: gi|229269690|gb|GG666221.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD178, whole genome shotgun sequence Length of sequence - 223 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 221 301 ## Smal_1611 diguanylate cyclase/phosphodiesterase with GAF sensor Predicted protein(s) >gi|229269690|gb|GG666221.1| GENE 1 2 - 221 301 73 aa, chain - ## HITS:1 COG:no KEGG:Smal_1611 NR:ns ## KEGG: Smal_1611 # Name: not_defined # Def: diguanylate cyclase/phosphodiesterase with GAF sensor # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 1 73 401 473 946 139 97.0 3e-32 NRRPLLASRAQIDALLAAGEVREHGARSHCWLGVPLLRDDEVVGAIVVQSYSQNSTFSVH DQRLLTFVAQNIG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:29 2011 Seq name: gi|229269689|gb|GG666222.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD179, whole genome shotgun sequence Length of sequence - 223 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:29 2011 Seq name: gi|229269688|gb|GG666223.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD180, whole genome shotgun sequence Length of sequence - 222 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 13 - 220 309 ## Predicted protein(s) >gi|229269688|gb|GG666223.1| GENE 1 13 - 220 309 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERGRTGRGRARGAAREPGTVCALPQPAAGRQGLAHRRGARLMRAGLSALFVALCGISLL VGARQMAWS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:35 2011 Seq name: gi|229269687|gb|GG666224.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD181, whole genome shotgun sequence Length of sequence - 222 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 193 112 ## Predicted protein(s) >gi|229269687|gb|GG666224.1| GENE 1 2 - 193 112 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ESVQLGVVGTPAKAFERTEERPRVGVGPTAVALPAELGDGGTDVRQEDCDQHAPESDGHG SSL Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:42 2011 Seq name: gi|229269686|gb|GG666225.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD182, whole genome shotgun sequence Length of sequence - 220 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 200 116 ## Predicted protein(s) >gi|229269686|gb|GG666225.1| GENE 1 3 - 200 116 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no SQQPCSGQLSIRGSFHASSTAWFSGSFRQSGQARCIGWVGSQARQLVMDRVLRRSLGSST ESWNA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:47 2011 Seq name: gi|229269685|gb|GG666226.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD183, whole genome shotgun sequence Length of sequence - 220 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:47 2011 Seq name: gi|229269684|gb|GG666227.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD184, whole genome shotgun sequence Length of sequence - 219 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 7 - 217 221 ## SPG_0962 hypothetical protein Predicted protein(s) >gi|229269684|gb|GG666227.1| GENE 1 7 - 217 221 70 aa, chain + ## HITS:1 COG:no KEGG:SPG_0962 NR:ns ## KEGG: SPG_0962 # Name: not_defined # Def: hypothetical protein # Organism: S.pneumoniae_G54 # Pathway: not_defined # 1 70 96 165 175 71 95.0 1e-11 MKNKESQNYEIFFQAKDIKVMEYAFKQVIAKENKKEKESILKQIKKYKDLSNNKDKTKEK VKRKVKEKVK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:50 2011 Seq name: gi|229269683|gb|GG666228.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD185, whole genome shotgun sequence Length of sequence - 219 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 217 334 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) Predicted protein(s) >gi|229269683|gb|GG666228.1| GENE 1 1 - 217 334 72 aa, chain + ## HITS:1 COG:XF0654 KEGG:ns NR:ns ## COG: XF0654 COG0791 # Protein_GI_number: 15837256 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Xylella fastidiosa 9a5c # 10 66 124 179 288 57 54.0 7e-09 AALLPHLAANDTIPLMDRSAVVAGDLSRLLANYDTSSAANGSVVGTAADNGKVQSLLRRA MTLLGTRTLGAA Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:50 2011 Seq name: gi|229269682|gb|GG666229.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD186, whole genome shotgun sequence Length of sequence - 217 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 217 155 ## COG1629 Outer membrane receptor proteins, mostly Fe transport Predicted protein(s) >gi|229269682|gb|GG666229.1| GENE 1 1 - 217 155 72 aa, chain + ## HITS:1 COG:PA0151 KEGG:ns NR:ns ## COG: PA0151 COG1629 # Protein_GI_number: 15595349 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 1 72 243 314 795 144 100.0 3e-35 VNVVSKKPQLQQANALTLRGSAYAHGRNGSGGQLDSTGPLGDSGLAYRMILDHEDEDYWR DFGKSRETLVAP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:51 2011 Seq name: gi|229269681|gb|GG666230.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD187, whole genome shotgun sequence Length of sequence - 217 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 11 - 215 393 ## Predicted protein(s) >gi|229269681|gb|GG666230.1| GENE 1 11 - 215 393 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWVRRPAALPLRSVVAQQAAQQHRHAQPQHDARGLGHIRNVGEFAARRGPDFQPDFRHRR LLVGLDAG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:14:57 2011 Seq name: gi|229269680|gb|GG666231.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD188, whole genome shotgun sequence Length of sequence - 216 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 201 376 ## Predicted protein(s) >gi|229269680|gb|GG666231.1| GENE 1 1 - 201 376 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no AEHRRAARSQSAARPTADAGDPDPGLSQRPALPERQDHRHRRQQRRDRAARATRCIPARA AGSGGR Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:02 2011 Seq name: gi|229269679|gb|GG666232.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD189, whole genome shotgun sequence Length of sequence - 215 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:03 2011 Seq name: gi|229269678|gb|GG666233.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD190, whole genome shotgun sequence Length of sequence - 215 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 9 - 164 154 ## AXYL_04583 hypothetical protein Predicted protein(s) >gi|229269678|gb|GG666233.1| GENE 1 9 - 164 154 51 aa, chain + ## HITS:1 COG:no KEGG:AXYL_04583 NR:ns ## KEGG: AXYL_04583 # Name: not_defined # Def: hypothetical protein # Organism: A.xylosoxidans # Pathway: not_defined # 1 51 68 118 118 77 78.0 1e-13 MDAHQPGWREGKIPAAAVYARTENGWFEWLIAELEAEIKDPHARARRQAQG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:05 2011 Seq name: gi|229269677|gb|GG666234.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD191, whole genome shotgun sequence Length of sequence - 214 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:05 2011 Seq name: gi|229269676|gb|GG666235.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD192, whole genome shotgun sequence Length of sequence - 213 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 213 212 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) Predicted protein(s) >gi|229269676|gb|GG666235.1| GENE 1 3 - 213 212 70 aa, chain - ## HITS:1 COG:PA5552 KEGG:ns NR:ns ## COG: PA5552 COG1207 # Protein_GI_number: 15600745 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Pseudomonas aeruginosa # 2 70 161 229 454 132 100.0 1e-31 GQIGEINTGILAVPGKRLADWLGRLSNDNAQGEYYLTDVIAMAVGDGLVVASAQPLDAME VQGVNDRMQQ Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:06 2011 Seq name: gi|229269675|gb|GG666236.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD193, whole genome shotgun sequence Length of sequence - 213 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 201 179 ## Predicted protein(s) >gi|229269675|gb|GG666236.1| GENE 1 3 - 201 179 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQPLRCRAVVCPCGAVHRQGQCVDERPCLRKPMPPALAPQGHAKQQCGPRNAGQQHEGGR QHRSSV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:12 2011 Seq name: gi|229269674|gb|GG666237.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD194, whole genome shotgun sequence Length of sequence - 211 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 174 175 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases Predicted protein(s) >gi|229269674|gb|GG666237.1| GENE 1 3 - 174 175 57 aa, chain - ## HITS:1 COG:YPO3352 KEGG:ns NR:ns ## COG: YPO3352 COG1063 # Protein_GI_number: 16123502 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Yersinia pestis # 1 57 82 138 371 121 87.0 3e-28 MIPGHEFIGHVVGYGEGVEGFNLGDRVISEQIVPCWQCRFCNRGQYWMCEKHDLYGF Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:12 2011 Seq name: gi|229269673|gb|GG666238.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD195, whole genome shotgun sequence Length of sequence - 208 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + TRNA 106 - 181 94.0 # Ala TGC 0 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:13 2011 Seq name: gi|229269672|gb|GG666239.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD196, whole genome shotgun sequence Length of sequence - 207 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 205 233 ## Predicted protein(s) >gi|229269672|gb|GG666239.1| GENE 1 1 - 205 233 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no TPDRDGRPTADTRGSRPRHRAACTRRCRSAHPWSAGGPPTTPDRRRTSSSPSVPSRQGCP PDADGEGW Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:19 2011 Seq name: gi|229269671|gb|GG666240.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD197, whole genome shotgun sequence Length of sequence - 206 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 190 274 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family Predicted protein(s) >gi|229269671|gb|GG666240.1| GENE 1 1 - 190 274 63 aa, chain - ## HITS:1 COG:mll0149 KEGG:ns NR:ns ## COG: mll0149 COG1902 # Protein_GI_number: 13470442 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Mesorhizobium loti # 1 52 303 354 367 58 51.0 2e-09 MITEPEQAESILRHRHADAVALARGILYDPRWPWHAAAALRESVVPAPQYLRCEPRDARG VFK Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:20 2011 Seq name: gi|229269670|gb|GG666241.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD198, whole genome shotgun sequence Length of sequence - 203 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 203 298 ## Predicted protein(s) >gi|229269670|gb|GG666241.1| GENE 1 2 - 203 298 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no ADLADDLTPPQLEDARLGQQVLGPGLAEEVDVQVRGHGHLDRPETPENDRVHRRVGQRHD GRAGQRS Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:26 2011 Seq name: gi|229269669|gb|GG666242.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD199, whole genome shotgun sequence Length of sequence - 203 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:26 2011 Seq name: gi|229269668|gb|GG666243.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD200, whole genome shotgun sequence Length of sequence - 202 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 118 57 ## Predicted protein(s) >gi|229269668|gb|GG666243.1| GENE 1 2 - 118 57 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no SSGLSCLNPALRVGVHSHPPIGTFPRTTWAPMLRHLIG Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:31 2011 Seq name: gi|229269667|gb|GG666244.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD201, whole genome shotgun sequence Length of sequence - 199 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 197 110 ## Predicted protein(s) >gi|229269667|gb|GG666244.1| GENE 1 2 - 197 110 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no RGIRRRQGAQPDPVGAAHRLPVEHQRRQPDPHRRPARPTEAAGLAEPAVRRPGADQGRRG PRAVP Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:38 2011 Seq name: gi|229269666|gb|GG666245.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD202, whole genome shotgun sequence Length of sequence - 198 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 196 73 ## Predicted protein(s) >gi|229269666|gb|GG666245.1| GENE 1 1 - 196 73 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no ASPSRSSTQTRATPWRRSSMAAANPAGPLPTMATSTCSVMLMATPGGEGLGEAAGAQLGD PRVAV Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:43 2011 Seq name: gi|229269665|gb|GG666246.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD203, whole genome shotgun sequence Length of sequence - 195 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 27 - 195 67 ## COG1113 Gamma-aminobutyrate permease and related permeases Predicted protein(s) >gi|229269665|gb|GG666246.1| GENE 1 27 - 195 67 56 aa, chain + ## HITS:1 COG:PA3000 KEGG:ns NR:ns ## COG: PA3000 COG1113 # Protein_GI_number: 15598196 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Pseudomonas aeruginosa # 1 29 385 413 469 66 100.0 1e-11 MISLSHLKFRAAMKRQGVDTFFKALWSPFQLPVPGLRVVHPWHHADDSPGSTSRCT Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:44 2011 Seq name: gi|229269664|gb|GG666247.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD204, whole genome shotgun sequence Length of sequence - 192 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:44 2011 Seq name: gi|229269663|gb|GG666248.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD205, whole genome shotgun sequence Length of sequence - 192 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:45 2011 Seq name: gi|229269662|gb|GG666249.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD206, whole genome shotgun sequence Length of sequence - 188 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:45 2011 Seq name: gi|229269661|gb|GG666250.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD207, whole genome shotgun sequence Length of sequence - 185 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 1 - 184 251 ## AXYL_06441 alpha/beta hydrolase Predicted protein(s) >gi|229269661|gb|GG666250.1| GENE 1 1 - 184 251 61 aa, chain + ## HITS:1 COG:no KEGG:AXYL_06441 NR:ns ## KEGG: AXYL_06441 # Name: not_defined # Def: alpha/beta hydrolase # Organism: A.xylosoxidans # Pathway: not_defined # 1 61 210 270 298 113 91.0 2e-24 VGQFSHHPDDYDRWSGYDSLRMPLLLLRGAESDLLLPEVAEAMTRRGPRAQRIDFPDCGH A Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:47 2011 Seq name: gi|229269660|gb|GG666251.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD208, whole genome shotgun sequence Length of sequence - 185 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:48 2011 Seq name: gi|229269659|gb|GG666252.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD209, whole genome shotgun sequence Length of sequence - 170 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:48 2011 Seq name: gi|229269658|gb|GG666253.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD210, whole genome shotgun sequence Length of sequence - 162 bp Number of predicted genes - 1, with homology - 0 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 162 115 ## Predicted protein(s) >gi|229269658|gb|GG666253.1| GENE 1 3 - 162 115 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no EKELLDAKKQADKDEALKKAKEAAIKELAAAGITDDASTGKINAASTVEEVER Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:53 2011 Seq name: gi|229269657|gb|GG666254.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD211, whole genome shotgun sequence Length of sequence - 159 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 158 75 ## MGAS10750_Spy1695 hypothetical protein Predicted protein(s) >gi|229269657|gb|GG666254.1| GENE 1 2 - 158 75 52 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1695 NR:ns ## KEGG: MGAS10750_Spy1695 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 52 27 78 289 94 100.0 1e-18 MTNEGQIESQNESIYEPQKEEFEKMLKDDVFTPSKEEIPYQDVPRIPGNTSE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:55 2011 Seq name: gi|229269656|gb|GG666255.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD212, whole genome shotgun sequence Length of sequence - 159 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 158 93 ## MGAS10750_Spy1695 hypothetical protein Predicted protein(s) >gi|229269656|gb|GG666255.1| GENE 1 2 - 158 93 52 aa, chain + ## HITS:1 COG:no KEGG:MGAS10750_Spy1695 NR:ns ## KEGG: MGAS10750_Spy1695 # Name: not_defined # Def: hypothetical protein # Organism: S.pyogenes_MGAS10750 # Pathway: not_defined # 1 52 27 78 289 94 100.0 1e-18 MTNEGQIESQNESIYEPQKEEFEKMLKDDVFTPSKEEIPYQDVPRIPGNTSE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:57 2011 Seq name: gi|229269655|gb|GG666256.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD213, whole genome shotgun sequence Length of sequence - 155 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:58 2011 Seq name: gi|229269654|gb|GG666257.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD214, whole genome shotgun sequence Length of sequence - 152 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:58 2011 Seq name: gi|229269653|gb|GG666258.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD215, whole genome shotgun sequence Length of sequence - 150 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:58 2011 Seq name: gi|229269652|gb|GG666259.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD216, whole genome shotgun sequence Length of sequence - 147 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:59 2011 Seq name: gi|229269651|gb|GG666260.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD217, whole genome shotgun sequence Length of sequence - 146 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:59 2011 Seq name: gi|229269650|gb|GG666261.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD218, whole genome shotgun sequence Length of sequence - 143 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:15:59 2011 Seq name: gi|229269649|gb|GG666262.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD219, whole genome shotgun sequence Length of sequence - 142 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:00 2011 Seq name: gi|229269648|gb|GG666263.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD220, whole genome shotgun sequence Length of sequence - 139 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:00 2011 Seq name: gi|229269647|gb|GG666264.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD221, whole genome shotgun sequence Length of sequence - 130 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:00 2011 Seq name: gi|229269646|gb|GG666265.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD222, whole genome shotgun sequence Length of sequence - 130 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 50 - 109 93.0 # AP008971 [D:616618..616735] # 5S ribosomal RNA # Finegoldia magna ATCC 29328 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis; Finegoldia. Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:01 2011 Seq name: gi|229269645|gb|GG666266.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD223, whole genome shotgun sequence Length of sequence - 128 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 128 79 ## Smal_2847 hypothetical protein Predicted protein(s) >gi|229269645|gb|GG666266.1| GENE 1 2 - 128 79 42 aa, chain + ## HITS:1 COG:no KEGG:Smal_2847 NR:ns ## KEGG: Smal_2847 # Name: not_defined # Def: hypothetical protein # Organism: S.maltophilia_R551-3 # Pathway: not_defined # 1 42 1463 1504 1790 80 92.0 1e-14 TSNPVLAPLATRDMADLYVLVDRAMGKDVSTNGLSHAYSSAE Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:03 2011 Seq name: gi|229269644|gb|GG666267.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD224, whole genome shotgun sequence Length of sequence - 117 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:03 2011 Seq name: gi|229269643|gb|GG666268.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD225, whole genome shotgun sequence Length of sequence - 117 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:04 2011 Seq name: gi|229269642|gb|GG666269.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD226, whole genome shotgun sequence Length of sequence - 115 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 28 - 94 94.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:04 2011 Seq name: gi|229269641|gb|GG666270.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD227, whole genome shotgun sequence Length of sequence - 115 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:05 2011 Seq name: gi|229269640|gb|GG666271.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD228, whole genome shotgun sequence Length of sequence - 114 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + 5S_RRNA 27 - 93 94.0 # AE015927 [R:2797299..2798807] # 5S ribosomal RNA # Clostridium tetani E88 # Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium. Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:05 2011 Seq name: gi|229269639|gb|GG666272.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD229, whole genome shotgun sequence Length of sequence - 114 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:05 2011 Seq name: gi|229269638|gb|GG666273.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD230, whole genome shotgun sequence Length of sequence - 113 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:06 2011 Seq name: gi|229269637|gb|GG666274.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD231, whole genome shotgun sequence Length of sequence - 113 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:06 2011 Seq name: gi|229269636|gb|GG666275.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD232, whole genome shotgun sequence Length of sequence - 113 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:06 2011 Seq name: gi|229269635|gb|GG666276.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD233, whole genome shotgun sequence Length of sequence - 113 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:06 2011 Seq name: gi|229269634|gb|GG666277.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD234, whole genome shotgun sequence Length of sequence - 113 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:07 2011 Seq name: gi|229269633|gb|GG666278.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD235, whole genome shotgun sequence Length of sequence - 112 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:07 2011 Seq name: gi|229269632|gb|GG666279.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD236, whole genome shotgun sequence Length of sequence - 111 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:07 2011 Seq name: gi|229269631|gb|GG666280.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD237, whole genome shotgun sequence Length of sequence - 111 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:08 2011 Seq name: gi|229269630|gb|GG666281.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD238, whole genome shotgun sequence Length of sequence - 109 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:08 2011 Seq name: gi|229269629|gb|GG666282.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD239, whole genome shotgun sequence Length of sequence - 109 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:08 2011 Seq name: gi|229269628|gb|GG666283.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD240, whole genome shotgun sequence Length of sequence - 107 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:09 2011 Seq name: gi|229269627|gb|GG666284.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD241, whole genome shotgun sequence Length of sequence - 104 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:09 2011 Seq name: gi|229269626|gb|GG666285.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD242, whole genome shotgun sequence Length of sequence - 103 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:09 2011 Seq name: gi|229269625|gb|GG666286.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD243, whole genome shotgun sequence Length of sequence - 102 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:10 2011 Seq name: gi|229269624|gb|GG666287.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD244, whole genome shotgun sequence Length of sequence - 102 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:10 2011 Seq name: gi|229269623|gb|GG666288.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD245, whole genome shotgun sequence Length of sequence - 100 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:10 2011 Seq name: gi|229269622|gb|GG666289.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD246, whole genome shotgun sequence Length of sequence - 97 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:11 2011 Seq name: gi|229269621|gb|GG666290.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD247, whole genome shotgun sequence Length of sequence - 97 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:11 2011 Seq name: gi|229269620|gb|GG666291.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD248, whole genome shotgun sequence Length of sequence - 91 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:11 2011 Seq name: gi|229269619|gb|GG666292.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD249, whole genome shotgun sequence Length of sequence - 80 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:12 2011 Seq name: gi|229269618|gb|GG666293.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD250, whole genome shotgun sequence Length of sequence - 76 bp Number of predicted genes - 0 Prediction of potential genes in microbial genomes Time: Wed Jun 22 22:16:12 2011 Seq name: gi|229269617|gb|GG666294.1| Anaerococcus lactolyticus ATCC 51172 genomic scaffold SCAFFOLD251, whole genome shotgun sequence Length of sequence - 70 bp Number of predicted genes - 0