Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:20:43 2011 Seq name: gi|148337441|gb|DS264420.1| Bifidobacterium adolescentis L2-32 Scfld020 genomic scaffold, whole genome shotgun sequence Length of sequence - 2676 bp Number of predicted genes - 5, with homology - 5 Number of transcription units - 3, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 204 - 836 1049 ## COG3047 Outer membrane protein W + Term 1022 - 1057 7.2 2 2 Tu 1 . - CDS 1062 - 1295 263 ## gi|154485924|ref|ZP_02027611.1| hypothetical protein BIFADO_00007 - Prom 1365 - 1424 80.3 3 3 Op 1 . - CDS 1426 - 1908 559 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 4 3 Op 2 . - CDS 1905 - 2132 149 ## gi|154485925|ref|ZP_02027612.1| hypothetical protein BIFADO_00008 5 3 Op 3 . - CDS 2143 - 2676 771 ## PXO_03096 hypothetical protein Predicted protein(s) >gi|148337441|gb|DS264420.1| GENE 1 204 - 836 1049 210 aa, chain + ## HITS:1 COG:XF0872 KEGG:ns NR:ns ## COG: XF0872 COG3047 # Protein_GI_number: 15837474 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Outer membrane protein W # Organism: Xylella fastidiosa 9a5c # 62 210 27 181 181 115 43.0 7e-26 MIRFRHLTLAMLGALAFAPAAFAQDASTDSASGKRFAIVGGYALTQPTKNPQIAGTRTNL DGDGAPTLSASYFFNDNFAVELWGSADKFGHRINSSAGKLGSVDSQPVALSGQYHFRGAD SIVRPFVGLGYYQANYTGEKLENGQRLGVDNAKGGIATAGVDLNINPTWFARADVRYMQG SKSDVKLNGLKVGEAELNPVTVGVGIGARF >gi|148337441|gb|DS264420.1| GENE 2 1062 - 1295 263 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154485924|ref|ZP_02027611.1| ## NR: gi|154485924|ref|ZP_02027611.1| hypothetical protein BIFADO_00007 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00007 [Bifidobacterium adolescentis L2-32] # 1 77 15 91 91 150 100.0 4e-35 MLGGLLQMRPEWRDLAPHWSIYLQVPDVEACVQRALELGGRLESAPFEANSDVRIARLAD PRGAAFYVIQFFGDPPA >gi|148337441|gb|DS264420.1| GENE 3 1426 - 1908 559 160 aa, chain - ## HITS:1 COG:mlr3516 KEGG:ns NR:ns ## COG: mlr3516 COG0697 # Protein_GI_number: 13473035 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Mesorhizobium loti # 10 160 7 156 315 81 37.0 5e-16 MTAAHPHARRAIFTMLAAVLMFSLMDALLKLLSEHYPPFQVATLRGASSLPFVLTWALLS GGGRSLLRVRWPLHLLRGALGVGMMASFVYGVNRLPLSTAYSVFFIAPLLITALSGPLLG ERVGPRRWVAIGIGLIGVLVLLRPTGEGMLSLVALAGLAS >gi|148337441|gb|DS264420.1| GENE 4 1905 - 2132 149 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154485925|ref|ZP_02027612.1| ## NR: gi|154485925|ref|ZP_02027612.1| hypothetical protein BIFADO_00008 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00008 [Bifidobacterium adolescentis L2-32] # 1 75 1 75 75 84 100.0 3e-15 MTRRGRRVMMPDRHVLAAMIPSLHSIAVARIEAARIEVADSIAGRTEAERTSADRIAAIL CAARRSESTQRATSP >gi|148337441|gb|DS264420.1| GENE 5 2143 - 2676 771 177 aa, chain - ## HITS:1 COG:no KEGG:PXO_03096 NR:ns ## KEGG: PXO_03096 # Name: not_defined # Def: hypothetical protein # Organism: X.oryzae_PXO99A # Pathway: not_defined # 6 152 17 165 185 74 38.0 2e-12 VALALLWALLIPIGLIQRYRYGKARRRALGWAVSLGATLSLLSLLLFFAGAWVSGHWIAD APLYAGAGLLAGLALGAFGLGLTRFEDEAKGLYYTPNRWIALGLTALIAARLCYGLWQGL HAWGADAPDSWLPRQGGLFAVGGLLLGYYLIYTLGVRRRLRRHHRLRERAPLTGDMR Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:21:00 2011 Seq name: gi|148337440|gb|DS264421.1| Bifidobacterium adolescentis L2-32 Scfld021 genomic scaffold, whole genome shotgun sequence Length of sequence - 3084 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 4, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 25 - 594 775 ## COG0113 Delta-aminolevulinic acid dehydratase 2 2 Tu 1 . + CDS 793 - 1176 165 ## Hbal_2279 hypothetical protein + Prom 1470 - 1529 80.3 3 3 Op 1 . + CDS 1568 - 2224 946 ## COG0169 Shikimate 5-dehydrogenase 4 3 Op 2 . + CDS 2289 - 2636 490 ## gi|154485930|ref|ZP_02027617.1| hypothetical protein BIFADO_00013 5 3 Op 3 . + CDS 2647 - 2901 160 ## COG0727 Predicted Fe-S-cluster oxidoreductase 6 4 Tu 1 . - CDS 2918 - 3082 172 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family Predicted protein(s) >gi|148337440|gb|DS264421.1| GENE 1 25 - 594 775 189 aa, chain + ## HITS:1 COG:NMB0801 KEGG:ns NR:ns ## COG: NMB0801 COG0113 # Protein_GI_number: 15676699 # Func_class: H Coenzyme transport and metabolism # Function: Delta-aminolevulinic acid dehydratase # Organism: Neisseria meningitidis MC58 # 1 187 146 332 333 285 74.0 3e-77 MNDETVQALVKQALSHAAAGADVVAPSDMMDGRIGQIRAELESEGHIHTRILAYSAKYAS SFYGPFRDAVGSAGALGKGNKYTYQMDPANSDEAMREIALDLDEGADMIMVKPGMPYLDI VRRAKDEFGAPTFVYQVSGEYAMLRAAIQNGWLDERGCVLESLTSIKRAGADGVLTYFAL DAAQWMREA >gi|148337440|gb|DS264421.1| GENE 2 793 - 1176 165 127 aa, chain + ## HITS:1 COG:no KEGG:Hbal_2279 NR:ns ## KEGG: Hbal_2279 # Name: not_defined # Def: hypothetical protein # Organism: H.baltica # Pathway: not_defined # 1 126 70 199 205 99 38.0 4e-20 MSLDLERNVRFCPTDRSDHDFIATWQADDTHHFVPVQLKELVPEELNKTLTLERLVDSLS KYKASPDLTVAIFLNREGRFDPSAFQIPSTVDVAGVWLVSNIGTDKWRIIGDFINQVRVI DFDYPQA >gi|148337440|gb|DS264421.1| GENE 3 1568 - 2224 946 218 aa, chain + ## HITS:1 COG:XF0624 KEGG:ns NR:ns ## COG: XF0624 COG0169 # Protein_GI_number: 15837226 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Xylella fastidiosa 9a5c # 1 212 64 277 282 221 64.0 6e-58 VPLKTRAASICTHLSERARRAGAVNTLIRSATGWEGDNTDGVGLIRDLTERHGLDLRERR TLLIGAGGAARGVAPALLDAGIGDLYIVNRTGERADALADTLGQPGRVHPRYLADVGNLG NFDLIVNATSAAREHEFPSLPMSLATPRTAAVDLSYGEAAIPFLAWAKVAGAHDRHDGLG MLVEQAAESFERWHRRRADTDPVYDLLRQGAGTLVTAD >gi|148337440|gb|DS264421.1| GENE 4 2289 - 2636 490 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154485930|ref|ZP_02027617.1| ## NR: gi|154485930|ref|ZP_02027617.1| hypothetical protein BIFADO_00013 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00013 [Bifidobacterium adolescentis L2-32] # 1 115 1 115 115 172 100.0 9e-42 MTFEDWLPALGAQAAMMTPNLIACAIGLVLCLSWKRRIGVGAVYAVAAFSLQIVGMLLGL AGQAWMYKSMASGMPASSAGLFQSVIGGVHVVLSLTATGLLIAAVLAKRPAPPQA >gi|148337440|gb|DS264421.1| GENE 5 2647 - 2901 160 84 aa, chain + ## HITS:1 COG:YPO1286 KEGG:ns NR:ns ## COG: YPO1286 COG0727 # Protein_GI_number: 16121569 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster oxidoreductase # Organism: Yersinia pestis # 1 84 1 84 84 92 64.0 2e-19 MRCRDRCGACCIAPSIASPIPGMPHGKPAGIPCVQLDDELRCRLFGKPERPRFCASLQPQ AEMCGDSREDALATLMALERATAP >gi|148337440|gb|DS264421.1| GENE 6 2918 - 3082 172 54 aa, chain - ## HITS:1 COG:VCA0993 KEGG:ns NR:ns ## COG: VCA0993 COG1902 # Protein_GI_number: 15601746 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Vibrio cholerae # 2 50 312 360 367 71 67.0 5e-13 SQGLADLVAFGRPFIANPDLPQRYAHDWPLAAFDPATLFGGDERGYTTYPAYAV Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:21:36 2011 Seq name: gi|148337439|gb|DS264422.1| Bifidobacterium adolescentis L2-32 Scfld022 genomic scaffold, whole genome shotgun sequence Length of sequence - 87243 bp Number of predicted genes - 69, with homology - 62 Number of transcription units - 49, operones - 13 average op.length - 2.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 19 - 683 99.0 # AP009256 [R:1909939..1911469] # 16S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 608 - 667 80.4 1 1 Op 1 . + CDS 693 - 851 150 ## + Prom 1049 - 1108 1.8 2 1 Op 2 . + CDS 1205 - 1978 773 ## COG0846 NAD-dependent protein deacetylases, SIR2 family + Term 1997 - 2039 10.2 - Term 1985 - 2027 7.5 3 2 Tu 1 . - CDS 2079 - 3344 1579 ## COG1171 Threonine dehydratase - Term 3421 - 3474 15.3 4 3 Tu 1 . - CDS 3500 - 5320 2206 ## COG0366 Glycosidases - Term 5613 - 5639 0.3 5 4 Op 1 38/0.000 - CDS 5641 - 6531 1387 ## COG0395 ABC-type sugar transport system, permease component 6 4 Op 2 35/0.000 - CDS 6550 - 7482 1611 ## COG1175 ABC-type sugar transport systems, permease components 7 4 Op 3 . - CDS 7497 - 8789 1538 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 8922 - 8981 5.0 + Prom 8817 - 8876 5.0 8 5 Tu 1 . + CDS 8975 - 10201 828 ## COG1940 Transcriptional regulator/sugar kinase 9 6 Tu 1 . - CDS 10321 - 12615 2536 ## COG3345 Alpha-galactosidase - Prom 12635 - 12694 1.5 - Term 12629 - 12670 -0.9 10 7 Tu 1 . - CDS 12742 - 13191 433 ## COG0590 Cytosine/adenosine deaminases 11 8 Op 1 . + CDS 13051 - 13317 150 ## 12 8 Op 2 . + CDS 13350 - 15434 2331 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters + Term 15494 - 15537 4.7 13 9 Tu 1 . + CDS 15795 - 16577 789 ## BAD_1579 phospholipase/carboxylesterase 14 10 Tu 1 . - CDS 16582 - 17163 724 ## COG0717 Deoxycytidine deaminase - Term 17182 - 17234 3.7 15 11 Tu 1 . - CDS 17273 - 20344 3390 ## COG0474 Cation transport ATPase - Prom 20590 - 20649 4.9 + Prom 20534 - 20593 2.9 16 12 Tu 1 . + CDS 20699 - 23848 2732 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 23899 - 23941 8.0 + Prom 23915 - 23974 2.8 17 13 Tu 1 . + CDS 24027 - 24884 1018 ## COG3247 Uncharacterized conserved protein + Prom 24923 - 24982 4.0 18 14 Op 1 6/0.000 + CDS 25045 - 26076 1286 ## COG1609 Transcriptional regulators + Prom 26110 - 26169 2.5 19 14 Op 2 35/0.000 + CDS 26331 - 27638 1761 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 27677 - 27722 11.1 20 15 Op 1 38/0.000 + CDS 27819 - 28754 1313 ## COG1175 ABC-type sugar transport systems, permease components 21 15 Op 2 . + CDS 28816 - 29694 1291 ## COG0395 ABC-type sugar transport system, permease component 22 15 Op 3 . + CDS 29881 - 31011 1087 ## BAD_1588 hypothetical protein + Term 31046 - 31119 25.8 + Prom 31068 - 31127 1.5 23 16 Tu 1 . + CDS 31189 - 31470 331 ## gi|212716509|ref|ZP_03324637.1| hypothetical protein BIFCAT_01435 + Term 31601 - 31651 20.5 - Term 31703 - 31752 2.3 24 17 Tu 1 . - CDS 31856 - 33118 1214 ## COG0477 Permeases of the major facilitator superfamily 25 18 Tu 1 . + CDS 33233 - 34225 461 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 34252 - 34285 5.4 - Term 34240 - 34273 5.4 26 19 Tu 1 . - CDS 34295 - 35704 2036 ## BAD_1592 hypothetical protein - Prom 35777 - 35836 2.1 - Term 35773 - 35814 11.1 27 20 Tu 1 . - CDS 35951 - 37078 1439 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 37236 - 37295 3.3 + Prom 37146 - 37205 3.5 28 21 Op 1 9/0.000 + CDS 37398 - 38114 711 ## COG3279 Response regulator of the LytR/AlgR family + Term 38360 - 38395 1.5 + Prom 38120 - 38179 1.8 29 21 Op 2 . + CDS 38399 - 39562 880 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 30 22 Tu 1 . - CDS 39667 - 40992 1244 ## COG0038 Chloride channel protein EriC 31 23 Tu 1 . + CDS 41040 - 41495 -331 ## gi|225351609|ref|ZP_03742632.1| hypothetical protein BIFPSEUDO_03206 32 24 Tu 1 . - CDS 41500 - 41613 138 ## - Prom 41686 - 41745 2.7 33 25 Op 1 . + CDS 41891 - 42820 621 ## COG0657 Esterase/lipase 34 25 Op 2 . + CDS 42832 - 44073 686 ## BLD_1941 putative permease 35 26 Tu 1 . - CDS 44070 - 45041 126 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 45265 - 45324 2.2 + Prom 45130 - 45189 1.6 36 27 Tu 1 . + CDS 45280 - 47205 2248 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 47231 - 47275 12.2 - Term 47312 - 47346 9.0 37 28 Op 1 . - CDS 47373 - 47963 994 ## BAD_1597 PTS system cellobiose-specific IIC component 38 28 Op 2 . - CDS 47956 - 50391 3034 ## COG1472 Beta-glucosidase-related glycosidases + Prom 51038 - 51097 2.1 39 29 Tu 1 . + CDS 51145 - 53670 3458 ## COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases + Term 53697 - 53750 14.1 40 30 Tu 1 . + CDS 54257 - 56098 1745 ## COG0366 Glycosidases + Term 56099 - 56130 -0.6 41 31 Tu 1 . - CDS 56530 - 56727 86 ## gi|154487618|ref|ZP_02029025.1| hypothetical protein BIFADO_01475 42 32 Tu 1 . + CDS 57010 - 57375 175 ## + Term 57445 - 57488 -0.7 + Prom 57623 - 57682 5.0 43 33 Op 1 35/0.000 + CDS 57748 - 59079 1798 ## COG1653 ABC-type sugar transport system, periplasmic component 44 33 Op 2 38/0.000 + CDS 59092 - 59946 830 ## COG1175 ABC-type sugar transport systems, permease components 45 33 Op 3 . + CDS 59943 - 60779 781 ## COG0395 ABC-type sugar transport system, permease component + Term 61000 - 61052 -0.9 46 34 Tu 1 . + CDS 61101 - 61400 174 ## BAD_1562 hypothetical protein + Term 61453 - 61487 8.3 + Prom 61453 - 61512 1.9 47 35 Op 1 . + CDS 61584 - 61709 165 ## BAD_1600 transposase 48 35 Op 2 . + CDS 61725 - 62018 199 ## COG2963 Transposase and inactivated derivatives 49 36 Op 1 . + CDS 62253 - 63872 1005 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase 50 36 Op 2 . + CDS 63914 - 65986 1714 ## COG1874 Beta-galactosidase + Term 65999 - 66051 19.0 51 37 Tu 1 . - CDS 66368 - 66562 151 ## + Prom 66476 - 66535 2.7 52 38 Tu 1 . + CDS 66662 - 66889 240 ## gi|154487629|ref|ZP_02029036.1| hypothetical protein BIFADO_01486 + Term 66970 - 67008 4.5 53 39 Tu 1 . + CDS 67340 - 67519 70 ## gi|154487632|ref|ZP_02029039.1| hypothetical protein BIFADO_01489 - Term 67766 - 67827 11.9 54 40 Tu 1 . - CDS 67860 - 67982 222 ## gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 - Prom 68135 - 68194 2.6 - Term 68159 - 68205 18.2 55 41 Tu 1 . - CDS 68238 - 69764 2410 ## COG2211 Na+/melibiose symporter and related transporters - Prom 69814 - 69873 5.0 + Prom 69972 - 70031 6.8 56 42 Tu 1 . + CDS 70090 - 73161 3745 ## COG3250 Beta-galactosidase/beta-glucuronidase + Term 73177 - 73210 1.6 - Term 73380 - 73440 20.6 57 43 Tu 1 . - CDS 73456 - 74475 1049 ## COG1609 Transcriptional regulators - Prom 74517 - 74576 3.3 + Prom 74481 - 74540 3.1 58 44 Op 1 . + CDS 74578 - 75051 345 ## COG2207 AraC-type DNA-binding domain-containing proteins 59 44 Op 2 . + CDS 75076 - 75510 417 ## COG0456 Acetyltransferases 60 44 Op 3 . + CDS 75476 - 75691 102 ## gi|154487640|ref|ZP_02029047.1| hypothetical protein BIFADO_01497 + Term 75697 - 75749 -0.8 + Prom 75708 - 75767 3.3 61 45 Tu 1 . + CDS 75929 - 76174 63 ## - Term 76069 - 76093 -1.0 62 46 Tu 1 . - CDS 76123 - 76257 145 ## gi|154487641|ref|ZP_02029048.1| hypothetical protein BIFADO_01498 - Prom 76348 - 76407 2.6 + Prom 76748 - 76807 1.7 63 47 Tu 1 . + CDS 76861 - 77835 869 ## BAD_1285 hypothetical protein + Term 77905 - 77942 2.3 - Term 78586 - 78632 15.5 64 48 Op 1 . - CDS 78660 - 79835 1229 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 65 48 Op 2 38/0.000 - CDS 79847 - 80725 1007 ## COG0395 ABC-type sugar transport system, permease component 66 48 Op 3 35/0.000 - CDS 80727 - 81644 937 ## COG1175 ABC-type sugar transport systems, permease components 67 48 Op 4 6/0.000 - CDS 81649 - 82947 1586 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 82990 - 83049 6.9 - Term 82961 - 83012 5.3 68 48 Op 5 . - CDS 83054 - 84190 749 ## COG1609 Transcriptional regulators - Prom 84417 - 84476 3.1 69 49 Tu 1 . + CDS 84503 - 84889 225 ## - 5S_RRNA 84550 - 84666 100.0 # AP009256 [R:1549800..1549916] # 5S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 85008 - 85513 99.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 85614 - 86026 97.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 86041 - 87243 98.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Predicted protein(s) >gi|148337439|gb|DS264422.1| GENE 1 693 - 851 150 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRHRHDDSRNKKIDDRLIRKGASHKNLTVLQGLPATRKERTMNWQSLTIKK >gi|148337439|gb|DS264422.1| GENE 2 1205 - 1978 773 257 aa, chain + ## HITS:1 COG:TM0490 KEGG:ns NR:ns ## COG: TM0490 COG0846 # Protein_GI_number: 15643256 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Thermotoga maritima # 6 232 13 225 246 174 38.0 2e-43 MYGGMSKKIAVLTGAGISTSAGIPDFRGPDGVWTKHPEQMNVYDIDAFLANKEDREYSWR WQKESPVWNAQPGTAHKALVKLEQAGLLTLLATQNFDALHEKAGNSSNVIVNLHGTIGTS HCMKCHAKYNTADIMANLDNEPDPHCHRKLPYSGNMPCNGLIKTDVVYFGEALPDGAIEK SYRLAAQADELWVIGSTLEVMPAASIVPVAAQAGVPITIMNMGRTQYDRLATRLIRDDIA IALPQLVDETIAAEQGK >gi|148337439|gb|DS264422.1| GENE 3 2079 - 3344 1579 421 aa, chain - ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 21 420 10 399 404 336 46.0 5e-92 MEQNEVLKALRRDHAAELKLAAERLKGTARHTEIIPSPVLSEMTGHEILLKPENLQVTGS FKIRGAYNKIASLSDEQLAHGIVTASAGNHAQGVAYAARERGAKATICMPQITPPLKVDA TKAYGADVVLCGEVFDESAAHAQELSDTEGMIYVPPFDDYEVLCGQGTIGLEILEDVPNV TDVVVPLGGGGLGAGVALAIKTFKPEVRVIGAIPEGSPAWKNSLAAGRVVAADQVRTSAE GVAVKRPGDLTFALLNEFLDDLVTVTERDINEMILLMLEKHKLVVEAAGAVSLAALEHLN LRSRKFAEAKGPHVVVPILSGGNEDTVSISAVIQKGMIARGRIMNFEVELPDTPGQLVKV ATILAEQRANVIALDHDQFKASSHYTDSVSLGVTVETNGPEHIDRILDAMRAAGFQPKRI Y >gi|148337439|gb|DS264422.1| GENE 4 3500 - 5320 2206 606 aa, chain - ## HITS:1 COG:BH2903 KEGG:ns NR:ns ## COG: BH2903 COG0366 # Protein_GI_number: 15615466 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 23 583 5 536 561 527 49.0 1e-149 MTNFNRSTLPDTVRSNGATPNPWWANAVVYQIYPRSFQDSNGDGIGDLKGITSRLDYLAD LGVDVLWLSPVFKSPQDDNGYDISDYQDIDPLFGTMADMDELLAEAHKRGLKVIMDLVVN HTSDEHAWFQASRDKNDPHADWYWWRPAKPGHEPGTPGAEPNQWGSYFGGSAWEYDPKRG EYFFHQYSKKQPDLNWENPEVRKAVYKMMNWWMDRGIDGFRMDVITQISKTVDKNGRLPG EDGSEIADLPVGEEGYSSPFPFCSDGPRIDEFLAEMRREVFEGREGYMNVGEAPGITPAR NEHVTDPANKELDMLFLFDHVGIDQEGSKWNTVPFEVKNLRDRMTEQQEAVRKAGWASLF FCNHDQPRVVSRWGNDSDRDSRELSAKAFGMVLHMHRGTPYIYEGEELGMTNAHFTKLEQ YRDLEALNGYRQRVEEAKCQSSESMMAALALIGRDNARTPMQWDASKYAGFTAPDAPVEP WISVNPNHVEINAAEEFDDPDSVYTFYKKLIAMRHNSATISTGEWHLLAADSDQVYAFTR TNGDDTILVVVNLTDRSAALPSDVAELLSDGVSDPQVLLSTYDAMHSVKSIARGELARWE GVVIQL >gi|148337439|gb|DS264422.1| GENE 5 5641 - 6531 1387 296 aa, chain - ## HITS:1 COG:SP1895 KEGG:ns NR:ns ## COG: SP1895 COG0395 # Protein_GI_number: 15901722 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 43 296 21 278 278 167 39.0 3e-41 MTSATVATKPAAAQSGQSQAKPEKIRKDHSINWWLTAAVAVLSLTVLVPLYFAVVTALKT PGEAGTFSLPTTWEWHNFADAWNKVNYPKAALNSAIITVCAVVLTLLTNTFVAYAVARNM DKRFFRFLYYFFLAMMFVPFTVVMLPIAKEMGTLHLDNQLGLIILYTILGIGTNLFIAIG FIRSIPISLEEAARIDGASTWRIFWTIIFPLMGPINATIAILTALWAWNDFLLPLITLTD QSNQTIPLAQYVFQSQFTSNYPMAFASYLMAMAPVLIVYIFAQKWVVGGVMRGAVK >gi|148337439|gb|DS264422.1| GENE 6 6550 - 7482 1611 310 aa, chain - ## HITS:1 COG:SP1896 KEGG:ns NR:ns ## COG: SP1896 COG1175 # Protein_GI_number: 15901723 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pneumoniae TIGR4 # 31 302 18 289 296 192 42.0 7e-49 MTGNISAKADKAAAKKPKKVSKYSKRKVDPAFYWMTIPAMILVCIFLYLPFLQGAMYSFT NSQGYGDYKFIGFKNYIAMFQDARVGHAYLFTIFIAILITLGTNILGMFLAVLLNSKIAF KNGFRAIFFIPYTLSVLVIGYVFKYIFMTPLPALGQALHIDWLSTSMISNPDLAWFPIVF LSIWQGVAYSTLLYLAGLQTIDNEIYEAASIDGVNAWQNFWQITFPLIGPFFTINMVLSL KNSLGAFDQVMALTKGGPDSKTETVSYLIFQNGLGNGEYSYQMANAVTFFIVLAILAFVQ LKFFSGKEKV >gi|148337439|gb|DS264422.1| GENE 7 7497 - 8789 1538 430 aa, chain - ## HITS:1 COG:SP1897 KEGG:ns NR:ns ## COG: SP1897 COG1653 # Protein_GI_number: 15901724 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Streptococcus pneumoniae TIGR4 # 31 426 19 416 419 117 27.0 3e-26 MKPDSNANTGTFRRIAGRAITAACAIVLTVGLAGCGNSTAGTVTLDFFQFKSEAADWFTA KAREFEKTHSNIKVNVNNSSDATTDLRTRLVKNREPDVITINGDINYGMLAEAGVFHDFT DDEIVDELNPGMVNIAKSLVQTTDKSKKRLYGIPYAGNASGYIINADVWKQAGEDPDNPP QTWSEFIALLKRLKAKGVTPVEASTADPWTLQAPLASLNSTLVPESEYAYLKDGSKTFSD LWTPVSGKLIEIYQNYTQKNPAVTYQQATQDIASGKAAILPLGTYAIPQIRLINKDANLR FAQMPATDNVKEQQLTAGDDVMLTIGAHTKHYTEAREFVDFLMSEENVQDYSKQQSAFTP YKDTYVGDEALNGVLDFYKAGKLADFCDHYVPASINLAGFLQTLVQSGNTKRFLNSMQSE YDKIEARNFR >gi|148337439|gb|DS264422.1| GENE 8 8975 - 10201 828 408 aa, chain + ## HITS:1 COG:VC2007 KEGG:ns NR:ns ## COG: VC2007 COG1940 # Protein_GI_number: 15642009 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Vibrio cholerae # 18 354 19 341 405 98 25.0 2e-20 MAISPIPHWFEGSEYTHKVAACIMKYGPISRITLAQILGLSQGAVSRITSDLIYAGVIEE TPMAAGHGGKLPKDFLRKSAQKSIQKENTERRGRPQTGLRIIANARTFVGMKINTTHITA VTVNALGQIVTGCHDLPLDDDSPESVVDVIRQLTMDCADEAIMAGLPSPCAVGVSLGGHI TDDSVTTFAPFLHWSKPVEFSAMIRKATGLPTGIYNDIDSLVVDACMFGSGVGLNSFAVV TIGIGVGYSLTVNGEPIDNPDKSYGLVGHILVDPDGPRCISGHKGCATCLTDNSIATEYS EMIGHPATFDEFAAAARASKTQATNLVNRTCFRLGTLIATIANLAMPDKIMIAGESSFIA KLGIDNLRNGINMYRHSQAAPVDFEIAEHDWSLWGKAAAAQAIRQYVG >gi|148337439|gb|DS264422.1| GENE 9 10321 - 12615 2536 764 aa, chain - ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 128 764 81 707 708 389 34.0 1e-107 MTLIQTFRGTSSNGTDLTAVYAEQPAAGTAIALVLPGNDLPRLVHWGRPLSAPETVLDAF DAIAPQRVSGALDYTAWPSVLPTQSESWIGATRFDVRRNGVELFCKFVVTDIKAETVAAG NTYDMTEKDGYPNWNVASEPKQTPTVTVVAEDVEQCVKLTWTCELDETGLVRQRAQVTNT GDGQLEVGKVELAFTVPADANEILTTTGHHLHERSPQRQDFTIGRFAKSSMIGRPDFDAT LLLSVGEHGFGFTHGNVYSAHVAWSGNSVLSAERLPYTTGVIGGGEVLFGGEVGLEHGES YTTPWLVGSYGEGLNEVASRFHGYIRRVHRDWLVDHGIAPKPRPVILNTWEAVYFNHDYD TLTALADKAVESGVERFVVDDGWFGARRDDTAGLGDWQISQDVWPDGDKSLKALADYVHG KGMEFGLWFEPEMVNPDSDMFRNHPDWVLKPTAGRLPMQGRTQQVVDLTNPDAYDYIYGA MDKLVSELGIDYIKWDHNKLVTEEVSPLTGRPAAHAQTLAVYRIFTDLKAAHPGLEIESC SSGGGRIDLGILEVADRVWASDCVDPVERADIQRYTSLLVPPEMIGEHVGASPAHSTHRA TSQEMRMATAFFGHMGIEWNLLKEPQEDIDKLAEWTAEFKKHREWFAVDTVVHSDAADPA VRVDGCVMPNKAAAIYRFTQLTTSQTYPAAPVKLPGLDPDAVYEVSPLDVSLDLAKQDIG NGQSPLGWWTADGVKMTGRALATYGIRPPAIHPAQAVLFKVVRV >gi|148337439|gb|DS264422.1| GENE 10 12742 - 13191 433 149 aa, chain - ## HITS:1 COG:all4872 KEGG:ns NR:ns ## COG: all4872 COG0590 # Protein_GI_number: 17232364 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Nostoc sp. PCC 7120 # 7 149 1 143 147 131 45.0 4e-31 MLWDDDMELAIALAREAAADGEVPVGAVVLDADGRAIGRGRNLRETHADPLAHAEVQAMR EAAASLGTWNLADCTLVVTLEPCPMCAGACLQTHVGRIVFGAWDAKLGACGSVWDIPRDP HVGPVPEVVGGVCEAECGRLMTDFFADRR >gi|148337439|gb|DS264422.1| GENE 11 13051 - 13317 150 88 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLAQVASTSDRTAVRIKYDGADRHFAVRGGFAGERDRQLHIVIPQHGFQCSDDGSPSPR PSSPANRMTRLQPLMPIAKHVHNYLLVG >gi|148337439|gb|DS264422.1| GENE 12 13350 - 15434 2331 694 aa, chain + ## HITS:1 COG:lin0795 KEGG:ns NR:ns ## COG: lin0795 COG0025 # Protein_GI_number: 16799869 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Listeria innocua # 1 683 1 669 682 370 34.0 1e-102 MAVFELILCIIAAVVLSSFLSRFIPKVSTPLVQIALGALASQLPFFPDVTLSPELFMVLF IAPLLYLEAHEIDKSELLKSVKLSLSLAIGLAIATMAAVGFALHAVWPAIPLAAALALGA ALGPTDAVAVSSLGKEAALTQRQTSVLKGESLFNDASGIVGFQFAIAAAVSGVFEVGEST MQFVVSFFGGAFFGIVVGMVADVVFETMRSLGWETMTTRILMELFLPFILYLGAEAVHVS GILSVVAAGLLIRFDRTGIGPNVARTNIVSSSVWGVLSFSLNGTVFILLGMLLPSAMTTS WDDPHVSNWLLLTAILVVSAVVIVMRFLWISLMLRLARDTTTGKRRKMTAKRWRSAAVMT FGGPKGTITLSLMFTIPYTLAAGANFPMRNELIFIAGGVIVVTLLLANFLLPLLAPNRNK DTSTEMTEITIEVLRRTVEELSGRVTPENRRAVLMIIDSYTKRITRLKQRTGEIDPQGYM RLQIDALNWEKEYVKNRLAGVRAAIKANPTGNRAANDLEAEACERLLDQIMSSLRHIETE HNSGRTIWRLKGRLRALQRRTGTLVRRVNSRIRRTTPLFSDDELFAHTRVVQVDAIEHVI DRLYEEMGGDTYNTEHCSGLLLDYRRSESALRARPNMGISAEAQEQAEEVKRESYGIELG VIQDMYEAGDITRAQSKQLRRNVYVMSVDADAQI >gi|148337439|gb|DS264422.1| GENE 13 15795 - 16577 789 260 aa, chain + ## HITS:1 COG:no KEGG:BAD_1579 NR:ns ## KEGG: BAD_1579 # Name: not_defined # Def: phospholipase/carboxylesterase # Organism: B.adolescentis # Pathway: not_defined # 1 260 1 259 259 437 81.0 1e-121 MSDAIEHEIPQTADNSNKTELIGRESDVVPGRFGEPLQVTHVQYSRGGGNATPKRPLFLC LHGWGSNEADLADMMRYIAPYNDYASLRAPLTLQAAGTFTPGAYSWFHDCVPSGEDLDRD AFAASMAIDDWVSQNVPEDRAVVPIGFSQGGLLAIHLLRMHPERYRASISLSGFLAPGLV RGTAPADDRIAPLNIPTFFGYGNSDTVIAKPELFAMSAWLDEHTFLTAKSYRGLDHSVSL DEFSDLRGWLAVHDIAPGIL >gi|148337439|gb|DS264422.1| GENE 14 16582 - 17163 724 193 aa, chain - ## HITS:1 COG:ML2507 KEGG:ns NR:ns ## COG: ML2507 COG0717 # Protein_GI_number: 15828356 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Mycobacterium leprae # 1 188 1 188 190 264 68.0 9e-71 MLLSDRDILAAQTDGHISLDPWTPEMVQPASIDVRLDRFFRLFNNHAYTYVDPAENQGEL TEQFEVRSDEPWILHPGEFALGSTWEYVKLDSTVAARLEGKSSLGRLGILTHSTAGFIDP GFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEHPYGSAGTGSHYQGQRGPTPS RSYVNFYKADITD >gi|148337439|gb|DS264422.1| GENE 15 17273 - 20344 3390 1023 aa, chain - ## HITS:1 COG:BH2515 KEGG:ns NR:ns ## COG: BH2515 COG0474 # Protein_GI_number: 15615078 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Bacillus halodurans # 48 1008 9 891 902 639 42.0 0 MDDRKKDQSIQSHANFDGDSATGDRTQIRQDQQNQQPPQIDPSLADAQAVAASLGVDPNT GLSQAEAERRLAQYGPNELASAPPVPKWKKFLAQFKDPLVYLLLAATGISLIAWFIEKAN AAPGAEGGEILPFDAIVIVLILIVNAVLGYIQESKAEEAVEALSQMTAPQTNVLRDGKIA RINTVDVVPGDMVVLGEGDSIPADGRLLAAASLRVAEASLTGESVPVGKNVDTLAEAKAL GDRANMVFNGTSVTQGTGRAIVTSTGMRTQVGKIADLLQATDDDDSPLQKEMNYVSKILG IAVCIIAAVVLVALALTEGFNDIHDVIDSLLLSVSLAVAAVPEGLAAILTVVLALGVRRM AEHHAIVKKLHSVETLGSASVICSDKTGTLTRNEMTVERVVTPSGEVQLTGTGYAPEGRM IAIPDAALSGSAASAAQVEAVATLAVGALANDGELRENTGAGDGSAASDITWEAVGDPTE VSLIVAARKVKADRKYANYTRIGEIPFTSDRKRMAVVAQDNADAGRLTVFAKGAPDVLLG YCSRIAVNGAVRPMTQGDRQQILAAVERLSAEAYRTLGQAYRPLGTASLAAVPGVRINAA GHVADIADQSDVLESDLIWVGMVGIIDPPRTEVRDSVAEAHRAGIRTVMITGDHPLTAAR IASDLGIIETDRNGSAAGADDLSGKVLTGVQLDELPDERAFDNATREISVYARVAPEHKL KIVESLQRQGNIVAMTGDGVNDAPAVKTADIGVAMGITGTEVTKQSAKMILADDNFSTIV EAVREGRGIFDNIRKFLRYLLSSNVGEVFTVFGGVMLAGFLGITQPGSQGVTVPLLATQL LWINLLTDAAPALAMGVDPSTDDVMARKPRKLTDRVIDGQMWGDIIFIGIIMAAVTLIGM DMHLAGGLFTDRSVDAVGHDAQMTEARTMGFTILVFAQMLNALCSRSHDQSVFVGLFANK WLWAAIALSTLLQLAVVYVPFLNTAFGTVPLSAGAWVECLGLAMIVLVASELRKCVLRAM HRR >gi|148337439|gb|DS264422.1| GENE 16 20699 - 23848 2732 1049 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 13 1042 3 1007 1014 786 41.0 0 MADTAELAIVHATTASASWLTDPTVFAANRKPAHSSHRYVIGETSEPKQSLDGEWKVRIE QARNVDVESAPFAAVDFEDGDFGAIEVPGHLQMAGYLKNKYVNIQYPWDGHEDPQAPNIP ENNHVAIYRRRFALDAQLARTLENDGTVSLTFHGAATAIYVWLDGTFVGYGEDGFTPSEF DVTEALRNGNGNAADSPEAEHTLTVACYEYSSASWLEDQDFWRLHGLFRTVELAAQPHTH VETVQLEADYTAADTAGTADTAELNAALTLRNPADAMTIESTLRDGDGNVVWESTQACNG EIALNSGKMTNIAPWSAESPTLYTLTVRVVGHDGAIIETVTQKIGFRTFRIENGIMTLNG KRIVFKGADRHEFDAKRGRAITREDMLSDVVFCKRHNINAIRTSHYPNQEYWYDLCDEYG LYLIDETNMETHGTWVANNVERPEDGIPGSRPEWEGACVDRINSMMRRDYNHPSVLIWSL GNESSAGEVFRAMYRHAHTIDPNRPVHYEGSVHMREFEDVTDIESRMYAHADEIERYLND GSPAHTDGPKKPYISCEYMHAMGNSCGNMDEYTALERYPMYQGGFIWDFIDQAIETKLPD GTTRMCYGGDFGDRPSDYEFSGDGLLFADRTPSPKAQEVKQLYANVKIAVSVDEARITND NLFVSTGDYRFVLRILADGKPVWSTTRRFDVAAGESASFEVDWPVDDYRSNAEELVLEVS QQLGNACDWAPAGYELAFGQCVVAGAKTTADAVDAAGAPADGTVTLGRWNAGVRGQGREA LFSRTQGGMVSYTFGEREFVLRRPSITTFRPLTDNDRGAGHAFERAAWAVAGKYARCVDC AIANRGENAVEATYTYELAIPQRTKVTVRYVADTAGLVSLDVEYPGEKNGDLPTIPAFGI EWALPVEYANLRFYGAGPEETYADRRHAKLGVWSTTAGDDCAPYLLPQETGNHEDVRWAE ITDDSGHGVRVKRGAGAKPFAMSLLPYSSTMLEEALHQDELPKPRHMFLRLLAAQMGVGG DDSWMSPVHEQYQLPADQPLSLNVQLKLF >gi|148337439|gb|DS264422.1| GENE 17 24027 - 24884 1018 285 aa, chain + ## HITS:1 COG:MT1660 KEGG:ns NR:ns ## COG: MT1660 COG3247 # Protein_GI_number: 15841079 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 117 281 31 193 195 72 27.0 1e-12 MSYPNMNPGNPNDPSQPPQPGYGAYAPSQQAQQSQQQDGPQSGGPDAEQTPRYSGNPYGN PYGNPYGYPYGNPYGYDPNSHSNDSGEWEPVSPFKLVESWLPQRAKNAIRGVYGVLGVMA IVLGIALLIWPGVTLKIAAVALGAYFVISGVIRIVTAIVELGLPGGWRVLDILVGLLLTV GGVVMLKNATLSGAMLAVLVTMVVGLGWMMEGVMALVESWHMPSSAWAVIYALISIVAGC IMLFSPLASTGWLILFGGCALVALGIVAIVRAFTFGKVGKSGKKR >gi|148337439|gb|DS264422.1| GENE 18 25045 - 26076 1286 343 aa, chain + ## HITS:1 COG:CAC0856 KEGG:ns NR:ns ## COG: CAC0856 COG1609 # Protein_GI_number: 15894143 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 2 334 14 342 346 95 27.0 2e-19 MAGIKDVAREAGVSASTVSYVLSGKRSISAKTTGKVMTAVEKLGYTPDASARKMRGMRNQ IIALSAPIRGDINQARYNAYFLRTAWAARNAGYDVMLLTGPDAVKDIRRVTQSNLADGIV LLDVEQDDERAAQSGTFSKPCVAIGYPSSHAGCACVDIDFALMGRKAVDFLYEKGHRTVV FLRNNESDYNRHSGYVVIFRESLLAHAKELGMTVIESEHYEADSFDAQHFVSTVFAHPDR PTAIINQANASVLSQVLMALHDAGMSIPQDVSVLSCGTYFEGEPTRFPITEMPVMPEELC AEAMNMLVSAIEEHTDIKGSVELIEPALKRRGSVAEAGSGGTI >gi|148337439|gb|DS264422.1| GENE 19 26331 - 27638 1761 435 aa, chain + ## HITS:1 COG:mlr7000 KEGG:ns NR:ns ## COG: mlr7000 COG1653 # Protein_GI_number: 13475830 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 12 355 10 343 414 69 24.0 1e-11 MNIKRGLATLAIAALSLTSLAACGSDTAQDEEKPDSLSFWYYEEDDAGQTQAWRRAAKAF EKETGVKINFERKSFTQIAQNGSQFLNSDEAPDLMESNRGNGSAGVLSTMGLLTDLGDYV KQYGWDKKVTGANAAVAKYDENGIMDGDTWYGMTSYAEFQRVYYNKDLFAKYNIKIPTTY DEFVDACQKFVDAGVTPIAADAQEYGVMWLWWQLVSKNADSKFIDNWQLYRGDVDWNSKV LTNSVKTINEWLDKGFISRNATGMKAEDTTQAFIKGEYPIYQTGTWNQGRFVKQIKSFDW DAAVMPESNYAVGCAGNLLVIPEKSHHKDLSAKFIDYVLSDDVQNFLGNAGGIPVAADTS KITDAKSKAMIEEYDSYAKDGKLSYYPDYAASNLTDAVPAEFQELVNGTKKPADVLKNIH EKYDTGVEDMGVKNN >gi|148337439|gb|DS264422.1| GENE 20 27819 - 28754 1313 311 aa, chain + ## HITS:1 COG:AGc4553 KEGG:ns NR:ns ## COG: AGc4553 COG1175 # Protein_GI_number: 15889771 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 304 10 302 312 159 32.0 4e-39 MSQKTKHEASMSRLPGNRSAKFVPYLIPGLIGLFAVVVVPFIWNIYLSFTRWRGVGPVKW VGLKNWKRLFSDSTFWISFANSFWIIVAIVVIPTILGLFISSLLTDVIQKKFGGKTASFL RALFYLPQLLPVAVAAIIMGWIFRPEDGAVNALLAKIGLGALQHNWLGSPDSALPILMFI LVWIQLGYPIVIFMSGLQRVDPELYEAAGLDGANWWQKFRVVTLPSIIPELLVVILTATI GALKTFAPVYLLTKGGPGTSTTVPSYYSYNQFFQVQQVGYGAAISTALTVVIIVFSIVFT LVQKHVEKELV >gi|148337439|gb|DS264422.1| GENE 21 28816 - 29694 1291 292 aa, chain + ## HITS:1 COG:mlr7002 KEGG:ns NR:ns ## COG: mlr7002 COG0395 # Protein_GI_number: 13475832 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Mesorhizobium loti # 26 292 24 287 288 134 29.0 2e-31 MTYSMSTAAARKASKKTQHVRSAGDWITLILLVAGALLVLFPLLVLTVNAFKTSADYNAT GPLSLPKHFTMEGIISFWTTTNFPLKFWNSFIISLVVAVAAVVLSVLNSFALGIGKVKGN TWIVLGIMLANMMPQEALLYPLYTMFKQVGLYNTKLAIIIIFTIIQSAYGTYLLSSVYGT FPQAILEAAAIDGASRWQILRKVVLPISWPTISVLFVFFFVWTWNEYMIPMAFLMSDDVQ TIPLALATLQGQRTMEATTLASASLLSIIPTIIFFIIFQRKLSQGITAGAVK >gi|148337439|gb|DS264422.1| GENE 22 29881 - 31011 1087 376 aa, chain + ## HITS:1 COG:no KEGG:BAD_1588 NR:ns ## KEGG: BAD_1588 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 376 1 376 376 788 99.0 0 MNTMATSGFGNGALDSLAIATDHGHTRCVNAENPTGGKGTAATAASALGPSRKGSPCIQT IKAGDSVTLMDVDGPGVIRHIWMTVTDRTSPTGPNVLRNLILEFYWDGEDTPSVQCPIGD FFCCGHAQACRINSIPIMVVPNRGFNCYFAMPFEHARIVLRNDHNEDVPAFFYQIDYTEY DALPADAMRFHAQWRRERVTEIARDYTILDNVHGHGAYIGTYLALTALESRWWGEGEVKM YIDGDEQYPTWCSTGAEDYFGGAWSFADFDEHGRMRENTFTGPYLGFPFYSQRLAAHRES DYWDVATPVMRGLYRWHIPDPIYFDSDLRVTWQQIGTEEAGNFERQDDVASVAYWYQLEP HTPFDPIGDRHFRQPR >gi|148337439|gb|DS264422.1| GENE 23 31189 - 31470 331 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|212716509|ref|ZP_03324637.1| ## NR: gi|212716509|ref|ZP_03324637.1| hypothetical protein BIFCAT_01435 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_01435 [Bifidobacterium catenulatum DSM 16992] # 39 93 3 56 56 68 76.0 2e-10 MPDAYRRAYSKGTTEKQQKNEEQEKQHNSDAPHDVEKKKRSKKPGGRPKGNIMKNNDTFN QILNSNLASIDPGFGQFALAKASANLMKKVLNK >gi|148337439|gb|DS264422.1| GENE 24 31856 - 33118 1214 420 aa, chain - ## HITS:1 COG:CAC2753 KEGG:ns NR:ns ## COG: CAC2753 COG0477 # Protein_GI_number: 15896010 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 5 399 17 387 410 107 24.0 6e-23 MFWGLWVTLLILWMGRFVTSFLSMYLVSDMHVSAGVAGTIVSMYGFGGIFGCLYGGALSD RFGRPAMIVIGNLGSAVMLVLLACIGNPWIMAITLLIYGAISSMPTPAVAAYVSDVVPFR KQKRAYSLQTWAANFGFAIGPIIANQLVKISYSLMFYAEAAVLVFATLLMMAFFKEAGLG VHGVGRSVKRSVERSVEQHVERSGTAQTAQSQQSKFSIWRSYRRACTDKALMSMVVLMFL YTLAYYQIVSGLPISMTQIGLGTDEYSSLLTINGGILCLLQIPAIALFQRMSNTRVLVLG MSITAVGYAFQIGADSWVTFAIATVLWTLGELGTFPIAATTVANIAPKDVRGTYQGLYNL VWSLSNAFSPLVGGWILNAFGSHVLWTCCTVMFVIVAIGFYVTRGPRERAAARNLAMEEL >gi|148337439|gb|DS264422.1| GENE 25 33233 - 34225 461 330 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 63 325 2 248 255 182 39 7e-45 MAMKKGPTKGSGGKHRNALKGKGPTPKAEDRVYHKAYKAKKAADRRKMADPRLAARRRVA KFTSESDDLVIGRNAVLEALRCGVPATTLYVAARIEHDDRTREIVRLAGIHGLHLLEADR LEMDRIARSSNHQGVVLKAQPFQYSSLAELVDRADKKARAMEAADSESARIAARPLFIAL DGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHMPVARVVNLTKA IESLKERGYYSVGLDGGGDALVGETGFETDPLVVVLGSEGNGLSRLVREACDSIAGIPMS NMVESLNASVAAGITLYAVARARREAAAAK >gi|148337439|gb|DS264422.1| GENE 26 34295 - 35704 2036 469 aa, chain - ## HITS:1 COG:no KEGG:BAD_1592 NR:ns ## KEGG: BAD_1592 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 469 1 470 470 862 98.0 0 MESHELPQMDPRVLKATSVKAEDPAAQSPEPQALKITAASSNPKMFTLPWEKPLATWPED LLVNLPRGISRHVVRFVHVGDEVYAMKEITRNVAEREYELLRRLQKLELPTVQPIAVVTG RHNAQGEPLEAILVTKHLKFSLPYRALFARNLRPDTAERLIDALAVLMVRLHLAGFYWGD VSLSNVLFLRDADAFSAFLVDAETGDLQVNLTEGQREYDVDLARTNIIGELMDLSSGALL PSNVDEIEIGNRLVDRYHSLWSALTDTDKFSPDEMWKIEKRVNKLNELGFDVDELEMKTA EDGKRVLVRPRVVDAGYANRKLLRLTGLDVQENQARRLLNDLDAYRTSTWRDGEDLEIVA TDWMREVFEPTVRMIPREYRSQIEPAQFFHEVLDHRWFLAEKAGHDVSMTEAVKSYVENV LPQYKLDSKDVDALNAEADSGVIDDEYTYGTDEDGYNPDDDPDAAVWSH >gi|148337439|gb|DS264422.1| GENE 27 35951 - 37078 1439 375 aa, chain - ## HITS:1 COG:Cgl2410 KEGG:ns NR:ns ## COG: Cgl2410 COG3839 # Protein_GI_number: 19553660 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 374 1 375 376 437 62.0 1e-122 MAEVVFDHVTRIYPGNDKPSVDDLNLDIKDGEFLVLVGPSGCGKSTTLRMLAGLEEVNKG RILIGGKDVTTMQPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGTPKEEIRKRVEKAA EILDLTEYLDRKPKALSGGQRQRVAMGRAIVREPKVFLMDEPLSNLDAKLRVQTRTQIAA LQRQLGVTTLYVTHDQTEALTMGDRIAVIKLGILQQVGAPTELYDRPANVFVAGFIGSPS MNINTHPVVNGKAKIGEDTVDLPTEAVNKLTAEDNGQIVVGFRPEDASLAAPDEANAFSL KVMNVEDLGSDGYIYGNIITDGSAAEASTMMSDQNKLTTIRVNPRALPKVGDTVKIKIDP SKMHLFAPSTELRLN >gi|148337439|gb|DS264422.1| GENE 28 37398 - 38114 711 238 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 4 236 2 232 234 100 24.0 2e-21 MRNIRIGVVEDDPASCQLVLDYLNRYQQENGEQFTVSVFDDGARIVEKYTPVYDILLLDI EMSEMDGMAAARRIRERDDKVVIVFITAAPQYAISGYEVRALSYLLKPLPWFAFSQELKK SIDMVRRNGDDSMLIETGNGQMRLNLADILYLESIRHTIVIHTLDGKYSINGTLKDMEAK LADRHFFRSNSCYLVNLKHVTGVADQDCIMSNGEQLRVSRPRKKAFMAALTDYMGGGR >gi|148337439|gb|DS264422.1| GENE 29 38399 - 39562 880 387 aa, chain + ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 155 372 209 425 433 73 23.0 4e-13 MPIWFWIIGMLLAFACMYATILLGAGTGKREGLYITARAFVLAELVASLHWQIVTFIGMR DGFADYDWPAIVLLVVTYALCFSLAWLVERGNFSQTAPTLPTASAAIATMAIMIVTFAMS NLSFVSTNTPFSGSVGQEIFYIRTLVDFCGFAILYAQQEQARRIEANTELASINAQLESQ HQEYLQSKENIESLGRLAHDLKHQITALRAEVDPKHAAAGFEQLEQSVQRYSAQQHTGNP VLDVILTTKERACADRGITFTAVADGSLLSGMSSMDIASLFGNALDNAIEATSKLPKCEQ RLIKLALYEQNHFIVIRVENYYDSRLKKDAEGNLRTTKRDDQHRHGFGVKSIRHIAQQYG GEVTIRTEDHWFVLTALIPKKTGLMAI >gi|148337439|gb|DS264422.1| GENE 30 39667 - 40992 1244 441 aa, chain - ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 48 424 1 378 380 164 33.0 3e-40 MRELRESQESQNSQGTQPKIGRIPALIAAVVIVGVAIGAAAGLLTLMLYGVEHLALGYVE NSQESGPFNVPVIRRLISVTAGAAIAAVIWWLLRTRSTKVPSVKKAVNGDIMPIWQTVVH VLLQIFIVGTGMSIGREVAPRELGAMFGQRFARWAHLDAKDTRMLVAITAAAGLAGVYNA PLAGTFFAVEILLSDITLETVTLAFSCSVLASWVASLVKGTHTFYLIGETDGLFTPDYMA FALVAGMILGAAGALFRRGSQWAEKAKPSGVGILWMLPLAGLLTGVVAIWVPQVMGNGRA TAQLSFSSNADLAVIPILLLSFGAKAIVTLLTIRSGASGGVLQPGIALGASGGAMLGILW MQIFHTNSIGMYALLGACALLAASQQAPLMAICLVMELADAPINLFVPIGFAVAVSAFVA SRLGGPLAAIHLSKSVKKEAN >gi|148337439|gb|DS264422.1| GENE 31 41040 - 41495 -331 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351609|ref|ZP_03742632.1| ## NR: gi|225351609|ref|ZP_03742632.1| hypothetical protein BIFPSEUDO_03206 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03206 [Bifidobacterium pseudocatenulatum DSM 20438] # 77 120 4 47 49 89 97.0 1e-16 MSHLPQRSFVTPRAWRSAVKYPRNSVSASCKLEILHEEKALILLNRQSGGDLQSQRHQKR ATVFPVTGLQCEDDIPPSSILRCFDFRFYANLVFDFTPATLLTIAFRYSEIIRNYRKAAK GHKKARPEKEGRPGGLRKGRKLRKERKGSQL >gi|148337439|gb|DS264422.1| GENE 32 41500 - 41613 138 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFTIIQVVNTLLAVIVSYPLLKFWVMPKSKDSKEATK >gi|148337439|gb|DS264422.1| GENE 33 41891 - 42820 621 309 aa, chain + ## HITS:1 COG:DR0133 KEGG:ns NR:ns ## COG: DR0133 COG0657 # Protein_GI_number: 15805172 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 26 155 19 148 296 70 35.0 3e-12 MLSEPVKALFESNTNARHAGDADRLAKEHKPNGVHVLTDLPYGIPDQLRKLDLYRPETQH EPLPVIIDFHGGGLYHGDKQNTMCRDMYLAKYGFAVVNANYRLVPQIGFQGQLHDALDAI IWTNEHAHDYGMDTNALFLIGDSAATLLILYLTAVLHSPVVASQLGMKEACGTARILAIA GCSGMYRFEGGVHGTAMGYYAEGYFPTLKERIRISPYLDVDRLVVDGNLPPFYLQTSTED YLADNTLEFARILQYRHHDYELRLLPKGLDHALVHDFAVKEVGLEHNEESQQIVKEAATF FKRYRPTTS >gi|148337439|gb|DS264422.1| GENE 34 42832 - 44073 686 413 aa, chain + ## HITS:1 COG:no KEGG:BLD_1941 NR:ns ## KEGG: BLD_1941 # Name: not_defined # Def: putative permease # Organism: B.longum_DJO10A # Pathway: not_defined # 1 397 1 405 421 254 39.0 5e-66 MEERIRSTRSSLAVFVGCCAMSFIGFALITNTSGLYFDAISRDLHVGRAKVSLTVSIRLI CSAISMAAFSRFSHRIRLRPTLIGCIGICAVGFLLCSRAYALWQFYLAFAVMGLAYVIPI TLMPPILLAAWFPTHFGTVLGITGCLSGLGGAIFNPLISHVIASYGWRSAYLLTGAMLMV LLLPCSYLLKPYPHGKLDTASAPNAKPAHDTRTKSGHLIGMLRSPAFLLLSAAMILLQIV SGINQHIPAYGISIGLTLTQAAWVVTARMIGASVGKLAIGSTLDRVRPQFAITLFAAIGT TGWFSLLFGANMEVAITASFLAGIGQCLLMIALPWSIRRVFPGDDYARALSVINATGQLT VAIATTVHGLIFDMTGGYGASLTLNVLLYVLAAIAIITVAHGHTQSFQHPNGD >gi|148337439|gb|DS264422.1| GENE 35 44070 - 45041 126 323 aa, chain - ## HITS:1 COG:lin2104 KEGG:ns NR:ns ## COG: lin2104 COG2390 # Protein_GI_number: 16801170 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Listeria innocua # 13 323 3 312 315 135 31.0 1e-31 MFKDSALSSMQTRQHIEKLIRVSQMYYDEGLNQSQIAGEVGYSRSSVSRMLTEARETGIV QITIGHPLQRLQSLEENLRNKYGLKTVRVAYSYDDSIASTLVPQCAAQLLVENLKPDSLI VTSTGTPMAATIRALPPLDYPRAHVTQMLGSLSSANSLTDSPEICRMMAERLGCAYSLLP APLIMGSAEVAQAVRSEKLIAMTLALGNRADIAIVGVGAIRQGHSGRIFHSFEDAAVARE LQEKGVVGHICGHHIDMHGNHVRTSLCERTISIDFERFRDIPLVIGVAWETWRARALHAC LVGGLMSALATNQGMAELLLDMD >gi|148337439|gb|DS264422.1| GENE 36 45280 - 47205 2248 641 aa, chain + ## HITS:1 COG:DR1931 KEGG:ns NR:ns ## COG: DR1931 COG1073 # Protein_GI_number: 15806930 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Deinococcus radiodurans # 91 346 21 231 261 70 25.0 1e-11 MSKVWQYLKQHAYGALTIVTVLLCILGSCIANLAQTDFGNVTKENLTIETSSGHRLGINM LKPKTATNDKPAPTIVFAHGGNGLKEKWDLYQIEWARRGFVVFSFDLYGHGDSEILNNTE WLVNGRGLYDTVKYATTLPFVDKDQIAVSGQSRGGNTIHETILLDNKAKKQLIKAVLYVS RDAVYKDNETQSFGYVPGKTTSAQAASKNNGEYFNYYGNRNVGIIAGKFDQYSFKETDKT TGKMLPNPDYLKHNNAKSFLNFGITPDSSTADGVSGKYYTKKVDGKEAFRVIYLENGFHT SQLFQSSSTAAAMEFMVKAFNMNTSLQSGDQIYQWRMIGSTIGFIGMFMFAVFFALWLSQ MPLFRGTSRGNAVMRIAESHPGTKAWAWGCLIVNTLFATVSTLFLYYNGVDTHIGTFFRQ GQALFAGSMLAISSVFTAIVTYIWYRCFAKKNGMNIDEIDLKTSAFSVFKTIMLALTVTG GTLLLVWGAQYFFKTNFSFLYWGIMPFGSFKIVDMLKVLPIFLIGYVISSIFINCMNYNT SYGKNKIVNILVLALVTAAVPALVSGAGWAKFMLTGVNDLFGAAYTRIPDSMFLTVFLLF ITPLTARGIYSKTRNPYLGGIINAILAMVITCVNCQVVFPA >gi|148337439|gb|DS264422.1| GENE 37 47373 - 47963 994 196 aa, chain - ## HITS:1 COG:no KEGG:BAD_1597 NR:ns ## KEGG: BAD_1597 # Name: not_defined # Def: PTS system cellobiose-specific IIC component # Organism: B.adolescentis # Pathway: not_defined # 1 189 1 189 191 322 96.0 4e-87 MTDNNAAKPAETGAGEKKVGPIRQWIKDHPNIWEFILFNVLSNISTITRFVVTWIGTAIF ITGLGLTQPFHFLIFNYDTKGNGLGGFLTFLLAEVLAQVVNFFVQMKWVFKSDSSFKDAA WKYVILAVIIVVVNLVLPGYVTGLCQGWGMNAGIAGTIASVVNTLLAVIVSYPLLKFWVM PKSGSKETAKSEEAAK >gi|148337439|gb|DS264422.1| GENE 38 47956 - 50391 3034 811 aa, chain - ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 6 658 38 713 793 384 36.0 1e-106 MELEDLSIVEKAAMLSGGSEWDSRGNDRADIPGFVMSDGPHGVRRQLGEGDHLGIGASKP ATCFPTACTVANTWDPALAEEMGEALGKEAHDLDVNVLLGPGMNIKRNPLCGRNFEYYSE DPIVAGRMAAGLIRGIQSNGVSACPKHFAVNSQELRRQASNSVVDERTMRELYLTGFEIA VREAKPMSIMTSYNEVNGVYAHENKHLLQEILRDEWGFDGMVVSDWGGSNSAVAAVKAGG SLEMPSPGFTSVRELEGAVKAGTLAEADINKRAAEVAKIAAATKLVGVGRDDLLSDDIAK AHHDIARTVAEHSSVLLKNDAATLPLKPGTRVAVIGDMAATARYQGSGSSKVNATKEENI LDEVKNAEGLVLAGYEQGYDRQGKPDEVLLNDAVALAKKDAVDVVLAVVGLDERSESEGL DRSTMAIPQAQNDLVTALAKTGKPVVIVLVAGSPVELPWFNDVAAMLYVGLSGQAGASAT VRALTGEVNPSGHLAETWPMQYEDCPSSGWYPAIGRDAIYREGPFVGYRYYETVGVPVRF PFGYGLSYSTFTYSAITATATGVDFVVTNDSDVAGSTVAQLYVRAPQGGVLHPDRELKGF IKVELAAHESKSVHIDFDRYTFRHFDVAANAWKTESGEWTLLVGDNAEHLPLAIPHTVAG DCTTADCAADPALGHYLTGRVKDVTDAEMAVLFGHEVLAPGKPTTFGVNDPIMSWVDSKG FAARTVARTLTKREAKIRQKTGSPDLNTLFILNMPPRAMSKMTQGMVDSAMVDAIVKIAN GHTFRGLGGVIAGFFRNQSANKHTAKELNHD >gi|148337439|gb|DS264422.1| GENE 39 51145 - 53670 3458 841 aa, chain + ## HITS:1 COG:SP0312 KEGG:ns NR:ns ## COG: SP0312 COG1501 # Protein_GI_number: 15900245 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-glucosidases, family 31 of glycosyl hydrolases # Organism: Streptococcus pneumoniae TIGR4 # 81 712 2 594 679 588 46.0 1e-167 MVDSTLFSLATLNAHPAMNPDSVIQGDHWRIGLITDALVRFEWSDSGRFVDDATQMAMVR DFGEKPEFTVTERNGWLEIDTPSLHISYNQRKFSPEGLYATVKHVNAIENTWHYGDVQRR NLGGTYRTLDEANGRIPVDPGVNSTDGWAIIDDSKSNVIRETAEVNGNHNDFGTWVTPKE EPTTDLYLFGYGHRYREAVHALYRLTGPTPLLPRFVLGNWWSRYHRYTETEYRQLVERFE KEGIPFTTAVIDMDWHLVDDVDPKYGSGWTGYTWNKDFFPDPKRFLNWLHEHGMKATLNV HPRDGVRAFEELYPQVAKAMNIDPESGEAVQFDLTDPKFMEVYFDQLHHPMEEDGVDFWW IDWQQGGLTRQPGLDPLWGLNHLHYLDSARNDGSDYSERNPRPLTFSRYAGPGSHRYPIG FSGDTVVTWESLKFQPEFTACASNIGYGWWSHDIGGHMFGYRDEELEVRWYQLGAFSPIN RLHSTDSPFNGKEPWNFHGDAERAMTSALRLRHAMIPYLYTMNRRAAFDNEPLVQPLYWD YPEIEAAYKLTDEFRFGTELLVAPIVDPAERSVQRAKADVWLPQGEWFDFFDGRHYTSRP AEGRRLEAWRDLDRMPVFAKPGAIVPLQMPAEGEALNSVANPRALQVVVFPGAENSFTLW EDDGAAQSKDRWASTEMALRFEGDSAQFSIAPAEGATDVIPASRDWTVTFRGIAPEAMHA VRATVDGSAAAPEVAYDAETLSLTVTLRDVPTSAAIAIDFADGLAVADDPVEADAFAVLK DAQMLYMTKEHAYRAIRELGKDALPALSTLEDLHGVGAQTKHQSHMPQPVIQALAEVLTR N >gi|148337439|gb|DS264422.1| GENE 40 54257 - 56098 1745 613 aa, chain + ## HITS:1 COG:BH2903 KEGG:ns NR:ns ## COG: BH2903 COG0366 # Protein_GI_number: 15615466 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus halodurans # 23 608 5 553 561 514 48.0 1e-145 MTDFNRSKLPDSVRSNGATPNPWWANAVVYQIYPRSFQDSNGDGIGDLKGITSRLDYLAD LGVDVLWLSPVFKSPQDDNGYDISDYQDIDPLFGTMADMDELLAEAHKRGLKVIMDLVVN HTSDEHAWFQASRDKDDPHADWYWWRPARPGHEPGTPGAEPNQWGSYFGGSAWEYDPKRG EYYFHQFSKKQPDLNWENPEVRKAVYKMMNWWMDRGIDGFRMDVITLISKKVDKNGRLPG EEGSEIADLPVGEEGYSNPNPFCADGPRQDEFLAEMRHEVFDGREGFLTVGEAPGITPAR NEHITDPENGELDMLFLFEHLDADCEDNTKWKPTKLELPKLKEILNGQQNAVSKAGWASL FFDNHDQPRIVSRWGDDSTKETREASAKALALLLHMHRGTPYIYEGEEVGMTNAHFTELD QYRDLESLNAYRQRVIETGVQDSESMMHGIAERSRDNARTPMQWDGSKYAGFTAPDAATE PWISVNPNHVEINAAAQCDDPESVHAFYKQLIDLRHRNPVVAAGDFRLLDASDRQVCSFV RALSSKDGQVAKRLLVMVNVSGEIARIPSETAALLPLDVDESHIVITTHDSAHTKLSLTK RELAPWEGVAIEL >gi|148337439|gb|DS264422.1| GENE 41 56530 - 56727 86 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487618|ref|ZP_02029025.1| ## NR: gi|154487618|ref|ZP_02029025.1| hypothetical protein BIFADO_01475 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01475 [Bifidobacterium adolescentis L2-32] # 1 65 273 337 337 131 100.0 1e-29 MSLVGFDDSTYAKQFNLTTVHQEVDFLGAEAGRLVLDLIRGQQPEVQNRVLDTYLALRAS TAPLS >gi|148337439|gb|DS264422.1| GENE 42 57010 - 57375 175 121 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSKIMQMLNNQAHTGIFINADGGAKTLCNRHIDTNQRYIKTSKILDFHHVYTERRDDHGI NVVPQWNLLKQLPTIGYIGNVIRTNVIALRLQHIIQRPTNVRVKPSGHRLANQHGNTERL L >gi|148337439|gb|DS264422.1| GENE 43 57748 - 59079 1798 443 aa, chain + ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 1 442 4 443 443 278 36.0 2e-74 MLRAVGVISALALGLGGLAACGNSSSAESKNGRVYYLNKKAEEQSTWVKLGKAFEKETGI PVQIQTGGTDYDATLRSELSKKTAPTMFQADGPSFMSSFKKYAKDLSNSDIYKQLDKNYK NRVLTNDEGKPIAIPYATESYGIIYNKALLKKYFDASWSTVKSAEDINNFKALKTVADEI QAHKDEIGVKGAFSSAGLDSSSAFRYNFHLPSVPLYYEYADDGVDMTKVPSSVKGTYVKK MKNIFDLYIKDSTVEPSSLSGKTMDDSIAEFATGQAVFFQDGVWAYNQIKGQSVSDNDLG VFPIYIGAKGEENQGLNQVISNYWCVNSKVSEKDQQATEKFLSWLVTSDTALKAISQDMG LVSPFKGFDNEKYQVTNPLVGVNREYQKAGKTDVISVPTVSHQWEQNLGSAELNYAQGNG SWDDVVKVFTNDWASEYKLAYGE >gi|148337439|gb|DS264422.1| GENE 44 59092 - 59946 830 284 aa, chain + ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 9 284 5 281 281 277 53.0 2e-74 MITMTGRAIRRWWPLFVLPTCFAFALGFVVPLVMGIYLSFTEFTTITDAEFVGLKNYVRA FQDPDFLHALLFTLAFTIVTTILINVAAFFVAYMFTKAMRGAKLFRSVFFMPNLIGGIVL GYIWQLLLNGVLAHWNISLTYHAKYGFIGMVILVCWQQIGYMMVIYIAGLQNVPGDVIEA ASVDGATPKQILWNITIPLMMPSITVCSFLTVTGGFKLFDQNLALTNGAPSNTSEMLALN IYRTFYGRAGFEGVGQAKAVMFFILVALIAIIQNKLTTSKEVQA >gi|148337439|gb|DS264422.1| GENE 45 59943 - 60779 781 278 aa, chain + ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 13 278 38 304 304 254 50.0 1e-67 MNQRIKHGPFWTGLFSVISLAWLFPLALVLINSFKKKVYISADTFSLPTGKEFAGLFNYK DGIEKTNFIASFGWSLVITVGTVLLILLCTSMCAWWIVRVNNVASKIIYVLFLLDMIVPF QMVMFPLSKMADMLSLNTPWGVCLVYLGFGAGLPVFIFTGTIKSIPQEIEESAMIDGAGA VRTFFTIVVPMMRSSIITVAILQTMWIWNDYLLPYLTLDLQRFKTIPIVIQYLRGGYGSI DMGALMACLVLAIIPIVIFFALCQKYIIQGITAGAVKG >gi|148337439|gb|DS264422.1| GENE 46 61101 - 61400 174 99 aa, chain + ## HITS:1 COG:no KEGG:BAD_1562 NR:ns ## KEGG: BAD_1562 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 96 106 200 200 79 47.0 3e-14 MLTLLWLIIMVWAWPLTARFENSVMATLRNALLFGGTSPFTTLAALIIPAIAIGLTVASL QWLPKGLYLLLILGFGIVVQLQIPLFEHALKPYVNKVAA >gi|148337439|gb|DS264422.1| GENE 47 61584 - 61709 165 41 aa, chain + ## HITS:1 COG:no KEGG:BAD_1600 NR:ns ## KEGG: BAD_1600 # Name: not_defined # Def: transposase # Organism: B.adolescentis # Pathway: not_defined # 1 41 1 41 144 72 92.0 6e-12 MAKCSKEQRDRAVDLYIKYERCAADVDWLQCIRPSDEGRMT >gi|148337439|gb|DS264422.1| GENE 48 61725 - 62018 199 97 aa, chain + ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 8 95 7 94 94 62 44.0 1e-10 MAGPKHPRHHDEAFKRQIVQLYESGKPSREIRAEYDIARSTPRRWVQGIRDSGSARAADN RTPGRNELIEPGRRNRQLEMEADVSEQAAPVFARRQA >gi|148337439|gb|DS264422.1| GENE 49 62253 - 63872 1005 539 aa, chain + ## HITS:1 COG:lin2213 KEGG:ns NR:ns ## COG: lin2213 COG1820 # Protein_GI_number: 16801278 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Listeria innocua # 195 535 44 377 380 203 34.0 7e-52 MREQGMTSAYARGRSEPHRTRADEARLANLLDRGFDGYAPHTHLASDLTYVRVGGDWAYV CLLVDLANRGIVGHSAGRTRDASLVLGAFAALDFPLTDVQETGVCRPEGSAGPSSRILTL GDNSMQADRVREMERINDAFLEEVVPFAVHGATIVDARGMTKNGWLVSDGRSIVETGCAE TDFETACRLVHVEQDHIVNANGMVMTPGYVDIHSHGAWGSSFDDGEKGITTARAGHMAHG TTRQVLSLITNPIDVICGNLKTVHDMMPDRPDILGAHLEGPFLAMPRKGAHDPNCLVDPT PDLVSRMLDAADGCLRQITIAPELPHGIDAIRRFFLAGVVPAVGHCDADYQTARKGFDAG AGIMTHMFNAMNGLHHRDPGPIPAAVEDPRVTIELINDGFHVQDPMVKLGFGLAPHRIAF VTDAMAATDCPDGHYLLGALDVDVRDGHARLASNGAIAGSTLLLEKAVSRAVLELGISPV DAVEAATLTPARAFGFDRRNDVTGFPIGLLAPGFAADVLLLDQETWTVRRVWCNGHPVR >gi|148337439|gb|DS264422.1| GENE 50 63914 - 65986 1714 690 aa, chain + ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 19 690 8 672 672 418 35.0 1e-116 MNQRREHRWPRPLEGRRARIWYGGDYNPDQWPEEVWDEDVRLMVKAGVNLVSVGIFSWAK IEPREDVYDFGWLDRIIDKLGKAGIAVDLASATASPPMWLTQAHPEVLWKDYRGDVCQPG ARQHWRPTSPVFCEYALKLCRAMAEHYKDNPYVVAWHVGNEYGCHNRFDYSEDAERAFQD WCEERYGTIEAVNDAWGTAFWAQHLNDFSEIVPPRFIGDGNFMNPGKLLDFKRFSSDALK SFYVAERDALAEITPEKPLTTNFMVSAGGSVLDYDDWGGEVDFVSNDHYFIPGEAHLDEL AFSASLVDGISRKDPWFLMEHSTSAVNWRPINYRKEPGQLVRDSLAHVAMGADAVCYFQW RQSRSGAEKFHSAMLPHAGEDSQTFRDVCELGRDLGTLADEGLLGTKLAKSSVAIVFDYE SEWASEHTATPTQNVHHIDEPLAWFRALADVGVTADVVPIRSNWDEYDVAILPSVYILSE ENTRRVRDYVANGGKLIATYYTGISDERDHVWLGGYPGSIRDVVGVRIEEFAPMGSDWPG VPDHLDLDNGAVAHDIVDVIGSIGKDAKVLASFKDDPWTGMDGRPAIVSNPYGEGRSVYV GARLGRDGIARSLPMILETLGVEVKDSSDPDLLRIERVDESTGARFTFLFNRTKEPVSML VEGRPVVMSLADCAGATVTINPNGVLVVKQ >gi|148337439|gb|DS264422.1| GENE 51 66368 - 66562 151 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRLIKSKSEMHNTWWIVPVGNIGQIKAKATAKKGLALSLSMESHLNSMQSHTNTLTRSE RAGE >gi|148337439|gb|DS264422.1| GENE 52 66662 - 66889 240 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487629|ref|ZP_02029036.1| ## NR: gi|154487629|ref|ZP_02029036.1| hypothetical protein BIFADO_01486 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01486 [Bifidobacterium adolescentis L2-32] # 1 75 1 75 75 127 100.0 4e-28 MLCEQLIPTFIGLVMAYSALFILIGTMNPTPSDSLAIFLLELHDGLPLPCATAMGTAIAV ILIREKDLFRLFKTR >gi|148337439|gb|DS264422.1| GENE 53 67340 - 67519 70 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487632|ref|ZP_02029039.1| ## NR: gi|154487632|ref|ZP_02029039.1| hypothetical protein BIFADO_01489 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01489 [Bifidobacterium adolescentis L2-32] # 26 59 1 34 34 64 97.0 3e-09 MRFGSNQERIEICPTDNFRGLTPPNVTTHAFDFEPMGNVRCGHRALSRSRPEPEGAQLS >gi|148337439|gb|DS264422.1| GENE 54 67860 - 67982 222 40 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352369|ref|ZP_03743392.1| ## NR: gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 40 74 113 113 70 85.0 3e-11 MQNDTFNQILNSNLASMDPGFGQFALAKASSDLFKKVINK >gi|148337439|gb|DS264422.1| GENE 55 68238 - 69764 2410 508 aa, chain - ## HITS:1 COG:CAC3451 KEGG:ns NR:ns ## COG: CAC3451 COG2211 # Protein_GI_number: 15896692 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 15 484 6 454 458 122 25.0 1e-27 MSNETTTADGGVRKKGKLGQRIAYACGNLGQSAFYNAMSTYFIVYVTGCLFSGVDKALAA KLIGVITSLVVIIRIAEIFIDPLLGNLIDNTNTKWGRFRPWQFFGGLISAVLLAVIFSGM FGLVNVNTTLFIVLFVITFVVLDVFYSLRDISYWGMIPALSSDSHERSTYTALGSFTGSI GYNGITVVVIPIVSYFTWTLTGAKGEGQAGWTSFGIIVGLLGILTAWTVAFGTKESTNAL RAKAQKNGNPLEAFKALFQNDQLLWVALSYLLYAIANVATTGVLLFLFKFVLDNQAAYSM TGVIALVAGLIMAPLYPILNKRIPRRVLYIVGMTSMIVAYILLGLFSTNMTVVFIALVLF YIPGTLIQMTAILSLTDSIEYGQLKNGKRNEAVTLSVRPMLDKIGGALSNGITGFIAVAA GMTGNATAADMTPSNIHTFEICAFYVPLILIVLSLLVFMFKVKIDEKMHAKIVKELEAKL ASGEIVDDEAQTAETVEAIDEEAKTLTE >gi|148337439|gb|DS264422.1| GENE 56 70090 - 73161 3745 1023 aa, chain + ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 9 1023 4 1014 1014 804 41.0 0 MANETRIEHASETWLADSTVFEVNRVPAHSDHKCYAHDPQTNEWSDLRQSLDGEWRVEVV QASDIEFNEEPFVRENFDDSAFERIQVPGHLQMAGLMNNKYVNIQYPWDGHENPAEPNIP ENNHVALYRKTFTMANRLADTKNAGGTVSIVFHGMATAIYVWVNGMFVGYGEDGFTPNEF DITEMLHDGENVVAVACYEYSSASWLEDQDFWRLHGLFRSVELAAQPHVHIENMQIESDW DPESGSASLDAALTVRNAADAATISATLKNSDGNVVWETANCADPDTSISTGSLNGIHPW SAEDPVLYEFEVTVIDHAGNIAEVAVQKVGFRRFRIEDGIMTINGKRIVFKGADRHEFDP KRGRAITEQDMIDDVVFCKRHNLNAIRTSHYPNQERWYELCDEYGIYLIDETNLETHGSW CLPGDVLTEETAVPGSKAHWEGACVDRVNSMVRRDYNHPSVLIWSLGNESYTGDVFRAMY KRVHDIDPNRPVHYEGVTHNRDYDDVTDIETRMYAHADAIEEYLKNDPQKPYISCEYMHA MGNSCGNMDEYTALERYSKYQGGFIWDFIDQAIYATQPDGTTSLRYGGDFGDRPSDYEFS GNGLVFADRKPTPKAQEVKQLYSNVHIDVAEDSVTIKNDNLFTSTGEYTFVLRVLADGEP VWQSERRFDVPAGSTEKLDVDWPLDLYRDGASELVLEVSQRLAKATNWAVAGYELAFGQT VVAGSKKASAPVKPVDGIVTVGRWNVGVQGSGREVLLSRTQGGLVSYTFNNREFVLRRPA VTTFRALTDNDRGAGHGFERAQWLGAGRYARCIGNEIEQIDENTVKASYTYELATPQRTK VTVSYTADTTGRVNLHVEYPGEPGDLPTIPAFGIEWTLPVQYSNLRFFGAGPEETYQDRK HAKLGVWSTDAFKDHAPYLMPQETGNHEDVRWAEITDEKGHGLRISRAEGAEPFAMSLQP YSSFMLEEAQHQDELPAPKHMFLRVLAEQMGVGGDDSWMSPVHPQYHIPADQPISLDVDL DLI >gi|148337439|gb|DS264422.1| GENE 57 73456 - 74475 1049 339 aa, chain - ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 1 333 1 328 330 187 35.0 2e-47 MATIREIAEKVGFSQATVSRILNDDPSFSVKEATRQKILSTSIEMGYENVPRYQRVTIPQ DIALLNNSIHDKGLQDAYFDELEVSLRRHAKDERMRVTEYNDVKSLMKDASKYAGFISIG PAPFKRNMLKRLHAVLPHGVFIDINPAPSLFDSVQPDLEQTILDALDELMDAGNKRIGFI GGFGNIMGDHEYPEDPRAFAFRNWTVRLGLDVDGLVFDEGPFTVENGRALGERFVAECGD RLPDALIVAADPIAVGVLQAFAASGILVPRDMRLVSINNQEIANYTSPTLSSYDINKDEL AKAAVFMLSEAISMGRSVNQHMRISTKLVARDSFTPKAR >gi|148337439|gb|DS264422.1| GENE 58 74578 - 75051 345 157 aa, chain + ## HITS:1 COG:mlr4907 KEGG:ns NR:ns ## COG: mlr4907 COG2207 # Protein_GI_number: 13474103 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 16 156 155 300 305 60 28.0 1e-09 MKMDWLQCIGQSDEAIRGFKLNMLLYELLSLLYSRFVSGVRRPELVRSGRNITMQIIGYM TSHRKQHLEATDVAREFGYGREHFCRLFRKATGKTFKEFLTDLRLDDACRKLSGSSASIA SIARECGFPDTRALQTAVQRKYGIRAQEYRERYENRN >gi|148337439|gb|DS264422.1| GENE 59 75076 - 75510 417 144 aa, chain + ## HITS:1 COG:Cj0225 KEGG:ns NR:ns ## COG: Cj0225 COG0456 # Protein_GI_number: 15791597 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Campylobacter jejuni # 8 144 3 138 148 119 44.0 1e-27 MTGPAPTIRRMKIEDYPLVYGLWTRCTGFTMRDIDDSEDAIRTFLKRNPDTCFVAEDDGG RIIGAILAGHDGRRSRIYHTAVDPDARGMGIGSLLVGRVVEALRAIGLPKVAVGVPADND AGNDFWEHQGFAVRDDLVYRELPL >gi|148337439|gb|DS264422.1| GENE 60 75476 - 75691 102 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487640|ref|ZP_02029047.1| ## NR: gi|154487640|ref|ZP_02029047.1| hypothetical protein BIFADO_01497 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01497 [Bifidobacterium adolescentis L2-32] # 41 71 1 31 31 72 100.0 1e-11 MTIWSIGNYLSNTTRPTTNRPIRSHFVSISPVPHLQSATNMFCISNVFKDHAVEYQKEED PFGALKRDELL >gi|148337439|gb|DS264422.1| GENE 61 75929 - 76174 63 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAVIPGFPISALFEKQFYPISALFRIPSGTVLTARLHQTPIPTILQINGKTSRGDPAGLR NGGQAYSAAPFSSIAPMPSPW >gi|148337439|gb|DS264422.1| GENE 62 76123 - 76257 145 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487641|ref|ZP_02029048.1| ## NR: gi|154487641|ref|ZP_02029048.1| hypothetical protein BIFADO_01498 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01498 [Bifidobacterium adolescentis L2-32] # 1 44 1 44 44 68 100.0 1e-10 MSPAFGEGSAVRTIVTMDGDGRLAIDLRHQGEGIGAMLLKGAAE >gi|148337439|gb|DS264422.1| GENE 63 76861 - 77835 869 324 aa, chain + ## HITS:1 COG:no KEGG:BAD_1285 NR:ns ## KEGG: BAD_1285 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 324 3 326 326 644 99.0 0 MTRIEDGIQDTEPIRFLELLGLDEEDLAGYSIRLNGSNPEWGKWSDLPDAYYFSYDDLMK WIFTKKWPDKDKATAQIHTRKVLQFIQLKPENPHPTQWLFVGAYDVLDEYTENDGKILYR YNEIPEYASLKARAVVYYKRDPGYTGVVFNLSNNEERRRDFLKTMTLEKIAQSPVSALPF SGYENVRLTHRQLVAAVNNEEWRAALGSVQAVYLQTDRRTGWHYVGSAYSRKGASHGLLS RWKEYASGDHSGGNKQLRNLGAGYIEKNFQYSILEIFDMNKSPKEIIDREHWWMDTLGSV RRNNDEVPHGYNSVAERENSDQHE >gi|148337439|gb|DS264422.1| GENE 64 78660 - 79835 1229 391 aa, chain - ## HITS:1 COG:PH0366 KEGG:ns NR:ns ## COG: PH0366 COG2723 # Protein_GI_number: 14590274 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Pyrococcus horikoshii # 6 386 4 405 423 219 33.0 7e-57 MKEQYEFPPEFIWGASTAAHQIEGNNVASDWWAREHAERTDLSEPSGDAADSYHRYGEDI RMLADAGLGMYRFSIEWARIEPAEGCFSKAQLLHYRQMIDACHENGVEPMVTLNHMTLPL WLATKGGWLNADAVDYFARYVRYVMPILHDVTWVCTINEPNMVALTRGGTEGSDFVAASL PAPDPDISATLVKAHRKAREILSGNPRIKSGWTIACQAFHAMPGCEREMEEYQYPREDYF TEAAAGDDFIGVQAYLRTFIGKDGPVPIPEDAERTLTGWEYFPPALGIAIRHTWNVAKRT PIIVTENGIATADDRRRIDYTFGAIAGMHDAMDDGIDVRGYLHWSLLDNYEWGSFTPTFG LASWDRDTFERHPKPSLDWLGSIARTGVMAR >gi|148337439|gb|DS264422.1| GENE 65 79847 - 80725 1007 292 aa, chain - ## HITS:1 COG:lin1843 KEGG:ns NR:ns ## COG: lin1843 COG0395 # Protein_GI_number: 16800910 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 24 292 7 276 276 214 43.0 2e-55 MTATTVAASRPQSNKQSLWRRFVKGRGLSYCVLAVIGVFWIFPFLWMALGSLKTQREILA KPPKLLPEHASLANFAKWFGELNFGTYFTNSMVVAVITVLGNMVFCSMVGYALAKMDFAG KNILFGAVMVTLMVPSVATFVPLFVIISNMGLANSYAALILPFLCQPIGVFLMRQFISGI PDALMEAARVDGAGELRIFFQIVLPQCGPPLATLSILTFLSSWNNFLWPLVAAQTEEKYT LPVALSLYSTGQNATNYSVLLAGAVLVVTPILLLFVFLQRYFIQGVAGTGIK >gi|148337439|gb|DS264422.1| GENE 66 80727 - 81644 937 305 aa, chain - ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 19 297 2 282 293 209 41.0 4e-54 MSLGTRKTKTEGSGNVLRRRRTILAWGFALPFAVVFCVFMLIPLLSSMAMSFTDITSKDL RTPFNVNFVGLDQYITLFHDHRFLHALGVTGIFVLVGLPITMAIALAFAVALNKGSKHLN AFFRAVFYAPVVASVVAVSVVWRYILQKDGLLNSLLAVFGIAGPDWLHDTRYALPALMAM TIWRNMGTLMIIFLAGLQAIPEELKEAAAIDGAGKWRTFRSITLPLLKPTLLLGAVLLSV AYLQFFEESFVMTQGGPLDSTLSAAYYVYQKFGFGQYGIASAASWVLFIIIALVSVLQFR ILKED >gi|148337439|gb|DS264422.1| GENE 67 81649 - 82947 1586 432 aa, chain - ## HITS:1 COG:lin1841 KEGG:ns NR:ns ## COG: lin1841 COG1653 # Protein_GI_number: 16800908 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Listeria innocua # 24 428 21 411 414 208 33.0 2e-53 MRKPFFKAVVAGMASVAMIAGMSACGRSANNADSDSDAVKTIDSSKATGDLTIWAMGNEG DLLGDFVKGFEKENPDVKVKVTAIPWSSAHDKLQTAIAAGNGPDLAQMGTTWMADFSNSF STVPDNLDMSDFSDGSRAASQVDGKQLGVPWYIDTRVLYYRTDIAGMAGWNKAPKTWNEL KRMAKDMQKVDGVKYGMNLNPSGTDAFLGTLPFSYSAGASLTNKEQTKWTFEDTGIKKGL NFTTSLYKDGVANVNADVSSGADIANFVSGDTPMMLQGPTAVSQINELGGDGFESKYATV ILPSMNESSGPATSFVGGSNLVTFKDSKNKQSAWKFIQWASKPEVQVEWYKKSSDLPASQ KAWDEDALSGNDKLAAFGDQLKHTMAPPALSTWAQVSSAADRILEQINKGQVSVDEGLKN LQSEADSIGTGN >gi|148337439|gb|DS264422.1| GENE 68 83054 - 84190 749 378 aa, chain - ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 4 371 6 332 333 136 29.0 6e-32 MARVTVYDVAEKAGVSTATVSFAFRHPDKVKDDTKAKVLRVAEELGYVPSGNARSLAKGR TGTLGMYAFDMLLERPQGSNLEDDWPDVSPRSIDEPLDGDEPNVLVYPLYVDEVLRGFEL ECWKSGKGMLMGAASKKNDHRSVTDIAGRVDGLALMPSGYNDTLPLSMLAKTIPLVMVGV GDEKLPAAYLQCDNASGMRQIVDHLVEVHHINDMAFVGGVNGGACARGTDADDVVSRYDA FKKYLEERGLDSKGALLDDSFATSDEYMVGLCEAIGSGRLPQALVCGTDQTAFGVIRLLE EAGVRVPDDVIVTGFDGILAGRLMEPQLTTVRQPMEDMGREAARMLLSRNGEPWEKAERR VLPVRLIVRGSCGCNQKI >gi|148337439|gb|DS264422.1| GENE 69 84503 - 84889 225 128 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGFPERKLDGNPQRVKRRRATLPHPLECSTIAAPGLSYRVRNGTGRLTRAMTTANLTATA RKPKESKPACHRWRFGNRLADARQSLPLYRSVTIPTHIAVQDDPAQERRGTNPPQEDRNC CVAVALAS Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:23:43 2011 Seq name: gi|148337438|gb|DS264423.1| Bifidobacterium adolescentis L2-32 Scfld023 genomic scaffold, whole genome shotgun sequence Length of sequence - 2238 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 679 1006 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 2 1 Op 2 . + CDS 721 - 1113 629 ## Psesu_2304 glutaredoxin 3 1 Op 3 . + CDS 1187 - 1351 204 ## COG0039 Malate/lactate dehydrogenases + Term 1549 - 1607 1.7 4 2 Tu 1 . - CDS 1867 - 2238 359 ## COG0784 FOG: CheY-like receiver Predicted protein(s) >gi|148337438|gb|DS264423.1| GENE 1 2 - 679 1006 225 aa, chain + ## HITS:1 COG:CC1534 KEGG:ns NR:ns ## COG: CC1534 COG0436 # Protein_GI_number: 16125781 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Caulobacter vibrioides # 1 224 177 399 400 171 40.0 1e-42 TGMVYSKDEIDALAAVVAKYPDTWIITDDIYNRMVFDGLGYHNFVHARPELRDRVIFIDS LSKTYGMPGWRVGFMAGPEVIAQAVTTMNSNHITNVPEIVTAAAVAALSGPQDVPTAKCA EFQAKRDRVMAVMNAIPGVICPRPQGAFYVFPDISVAFGKTHQPSGIKIGNDMDFCSALL ETKGVACVPGSAFGEPNALRISYTCPTPQLAPGLQRFQEFFAELV >gi|148337438|gb|DS264423.1| GENE 2 721 - 1113 629 130 aa, chain + ## HITS:1 COG:no KEGG:Psesu_2304 NR:ns ## KEGG: Psesu_2304 # Name: not_defined # Def: glutaredoxin # Organism: P.suwonensis # Pathway: not_defined # 32 128 19 115 118 127 59.0 1e-28 MRVTSVLCIVTALAVGAVGAKFVLNGGLPQQWFGSQPAQLAPDDPRHSTGDKRIVMLAAE WCGYCEKLRKDFELADVRYTLIDVDTEQGQRAMAAVGARGVPVTIVGQDIVYGYNPDQIK DKLAPLGYRL >gi|148337438|gb|DS264423.1| GENE 3 1187 - 1351 204 54 aa, chain + ## HITS:1 COG:RSc1998 KEGG:ns NR:ns ## COG: RSc1998 COG0039 # Protein_GI_number: 17546717 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Ralstonia solanacearum # 2 49 3 50 329 81 83.0 4e-16 MKTPVRVAVTGAAGQIGYSLLFRIASGEMLGKDQPVILQLLELPLEKPRPRSRP >gi|148337438|gb|DS264423.1| GENE 4 1867 - 2238 359 123 aa, chain - ## HITS:1 COG:XF0973_2 KEGG:ns NR:ns ## COG: XF0973_2 COG0784 # Protein_GI_number: 15837575 # Func_class: T Signal transduction mechanisms # Function: FOG: CheY-like receiver # Organism: Xylella fastidiosa 9a5c # 4 119 32 147 150 87 43.0 8e-18 GRKVWVIDDDLHSRQAALHLLGDWGCLADGAASAAEALTRADAQPPPDLLLLDYRLGEST GFELGTQLEAKWKRLPPVVLMSADADPTLRPRAAERDWHFLPKPLKPAALRALASRLLLA RGE Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:23:47 2011 Seq name: gi|148337437|gb|DS264424.1| Bifidobacterium adolescentis L2-32 Scfld024 genomic scaffold, whole genome shotgun sequence Length of sequence - 2841 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 359 - 808 702 ## COG2234 Predicted aminopeptidases + Term 910 - 962 14.0 + Prom 810 - 869 80.3 2 2 Op 1 . + CDS 1019 - 2332 693 ## gi|154485941|ref|ZP_02027628.1| hypothetical protein BIFADO_00024 3 2 Op 2 . + CDS 2374 - 2616 271 ## COG1396 Predicted transcriptional regulators Predicted protein(s) >gi|148337437|gb|DS264424.1| GENE 1 359 - 808 702 149 aa, chain + ## HITS:1 COG:XF0820 KEGG:ns NR:ns ## COG: XF0820 COG2234 # Protein_GI_number: 15837422 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Xylella fastidiosa 9a5c # 36 147 1 113 529 122 56.0 2e-28 MKLIATPLAVLCAAVLSMPAYAAKPAKAPKAPKTPLFDTKRLSEEVKVLSSDEFEGRGPA TEGEKKTIDYLIAQFKAAGVQPGGDLKDGKRLWTQAVPLLRSQISGTPNLSVAVKKKARP LVQGNDIAVRAALDGFKAVNIKNAPLVSS >gi|148337437|gb|DS264424.1| GENE 2 1019 - 2332 693 437 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154485941|ref|ZP_02027628.1| ## NR: gi|154485941|ref|ZP_02027628.1| hypothetical protein BIFADO_00024 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00024 [Bifidobacterium adolescentis L2-32] # 1 437 1 437 437 842 100.0 0 MDVPGRLTKKEMRTVDRIVSELFTTKAYLRAGDLKGAGKYLERELICNRKPVAYLSDLGL DQLSRLIALLDSADLFMGRANYGDVYSSCRRLLGQCIFDGSMPESGGEFIELLARSVSSR IDDYFFAFPIHGVEVKDLDRFWLGEAYVVPNVRKYIEEMKVEWAGDRLDQVMSALDGYCW LVGKAHGTEAVAQQKFKKLAEIIAGFLAVIAGSRYEWGAESFRIGVITSVESAYGRSAGL RWRAADKSLVTSWQMPKAQLLELNEELLHELAHLRVLPHFAGLCAKQIVNDLESAVLAAL YWYSDAHRDTNPVMKFVKYWSCIEAFFSIDGEVTKSVSIGLASVLGFGGHELDYSKTKKR ALKLYELRSSAIHSGRHDHISSSDVGLLSQWSAWAILEVLLFLRMGGESLSELRGVVTEV DQSQSKPVRVVRSAAVS >gi|148337437|gb|DS264424.1| GENE 3 2374 - 2616 271 80 aa, chain + ## HITS:1 COG:msr0960 KEGG:ns NR:ns ## COG: msr0960 COG1396 # Protein_GI_number: 13471079 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mesorhizobium loti # 13 76 16 79 83 60 45.0 9e-10 MPTVLNKPEYLRLRQLLVEARERAGLTQTQVAEKLHRAQSFVSKYELGERRLDVIDFMHV CVCLGVDPGDVLRQIAKSRK Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:24:05 2011 Seq name: gi|148337436|gb|DS264425.1| Bifidobacterium adolescentis L2-32 Scfld025 genomic scaffold, whole genome shotgun sequence Length of sequence - 1913 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 3, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 76 63 ## 2 2 Op 1 . - CDS 183 - 497 213 ## gi|154485943|ref|ZP_02027630.1| hypothetical protein BIFADO_00026 3 2 Op 2 . - CDS 494 - 829 542 ## COG0504 CTP synthase (UTP-ammonia lyase) - Prom 868 - 927 80.3 4 3 Op 1 . - CDS 1004 - 1603 508 ## Vapar_6275 hypothetical protein 5 3 Op 2 . - CDS 1660 - 1911 315 ## COG3189 Uncharacterized conserved protein Predicted protein(s) >gi|148337436|gb|DS264425.1| GENE 1 1 - 76 63 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKLCGFDVGLDQPFFLIAGPCVIES >gi|148337436|gb|DS264425.1| GENE 2 183 - 497 213 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154485943|ref|ZP_02027630.1| ## NR: gi|154485943|ref|ZP_02027630.1| hypothetical protein BIFADO_00026 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00026 [Bifidobacterium adolescentis L2-32] # 37 104 1 68 68 104 100.0 2e-21 MKPPPPGPSGRAETSQAAAVPGRPARNDVRGAGKWLMLLVLGVLMAGLVAYKLILGDGVD GYGMVFFPLALVVSCIAVPLALIAAAMWLIGIARARRAGGKQGP >gi|148337436|gb|DS264425.1| GENE 3 494 - 829 542 111 aa, chain - ## HITS:1 COG:XF1288 KEGG:ns NR:ns ## COG: XF1288 COG0504 # Protein_GI_number: 15837889 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Xylella fastidiosa 9a5c # 1 109 444 552 554 206 87.0 8e-54 VQDQRIKPGTLARELYGKDVVGERHRHRYEFNNRYRTQLEDAGLVISAKSMDDLLVEMVE LPRAQHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAREAKAGGKLLREVKG >gi|148337436|gb|DS264425.1| GENE 4 1004 - 1603 508 199 aa, chain - ## HITS:1 COG:no KEGG:Vapar_6275 NR:ns ## KEGG: Vapar_6275 # Name: not_defined # Def: hypothetical protein # Organism: V.paradoxus # Pathway: not_defined # 2 194 13 205 218 96 35.0 7e-19 MRLLQLHEYLDLLAAGGSSVPVPEELRAGWLEQARRIWPDTGLEPWQAQPREVIACHRDP HGRLLVHINADHDDCFVILVCAPTQTAPEACLLFDIGAEYNEIVFVCPYADYEGPAGDEV IDASIAHLNRHHDPFAVLLMGEGTYMQVYQDESGQYELEHQLVTTACRYLAEGPLDAAAV AAVFKSYARGDKGWTTAVR >gi|148337436|gb|DS264425.1| GENE 5 1660 - 1911 315 83 aa, chain - ## HITS:1 COG:RSp1510 KEGG:ns NR:ns ## COG: RSp1510 COG3189 # Protein_GI_number: 17549729 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Ralstonia solanacearum # 2 82 48 131 132 97 58.0 7e-21 TLAPSLETMKQAQAAQTPAQWNAFVRKYKAEMKSLDAQHALDLLAAMSRDSDFSVGCYCE DESHCHRSILRELLTERGARIAG Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:24:22 2011 Seq name: gi|148337435|gb|DS264426.1| Bifidobacterium adolescentis L2-32 Scfld026 genomic scaffold, whole genome shotgun sequence Length of sequence - 2714 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 512 -96 ## PB2503_05922 hypothetical protein - Term 1142 - 1182 11.9 2 2 Op 1 . - CDS 1193 - 2092 313 ## gi|154486226|ref|ZP_02027633.1| hypothetical protein BIFADO_00029 3 2 Op 2 . - CDS 2154 - 2714 198 ## gi|325918053|ref|ZP_08180214.1| hypothetical protein XVE_4236 Predicted protein(s) >gi|148337435|gb|DS264426.1| GENE 1 2 - 512 -96 170 aa, chain - ## HITS:1 COG:no KEGG:PB2503_05922 NR:ns ## KEGG: PB2503_05922 # Name: not_defined # Def: hypothetical protein # Organism: P.bermudensis # Pathway: not_defined # 5 170 274 436 1414 127 47.0 2e-28 MVIEPLDHIKQRRVASALRGADGETLLEEARATSGLRELVSVPLFLNAILRLSPGSRLPT TKEGVLAAFVEQHSQIANRNEALRNATLGHEKEILADLALAATRAANTSLPDHNARASVQ ATQRRLADEGQISAYSAPQPLMVLDTLIAEHLLVRSSGESVGYSFQHQQF >gi|148337435|gb|DS264426.1| GENE 2 1193 - 2092 313 299 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486226|ref|ZP_02027633.1| ## NR: gi|154486226|ref|ZP_02027633.1| hypothetical protein BIFADO_00029 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00029 [Bifidobacterium adolescentis L2-32] # 1 299 1 299 299 551 100.0 1e-155 MGKLVRKNKLEPSALPATGVCRRIRARLPYVTAVEGDQASSSQKVEAVDKFSLCAASSRR VTCLVAPEPWDSHAWDALHALFPRPAEAWLTGQHSCLSRRALILETIRLERSLRHKSPPI SANSGLDAFTPGIAMLPIGWQPAIKAIGSELLSMLPSGSLKGASPGNELWQALTRLPVYP CGRFTFLHTETLDRGVLRTLGTLSAALSASSNRGTRRPELAQRIAEHPLGSALLKKTIQR VLMRGYADGARVVLGRHAPELYRTIRSRPVVRLPWVLLWLPFGRMPSAQVAWTRQRGTH >gi|148337435|gb|DS264426.1| GENE 3 2154 - 2714 198 186 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|325918053|ref|ZP_08180214.1| ## NR: gi|325918053|ref|ZP_08180214.1| hypothetical protein XVE_4236 [Xanthomonas vesicatoria ATCC 35937] hypothetical protein XVE_4236 [Xanthomonas vesicatoria ATCC 35937] # 1 165 74 238 246 120 41.0 6e-26 EQLQWRYAWPEYHRSGLMPVLCEYLESVTRDDFGLALRYRYWQELAVAEAEHFFELQLAK HRFDTAWAQDFIFVHRDFQPALSIAQWRYCCWAATRQGASVALQQRLPAPAQVREAIYVE LQQRAARLATGVWAECSFPPPNPRPGSALSRIFVTHLARLGPEFWLLAPHVEHVLFRAGA PALVLQ Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:24:49 2011 Seq name: gi|148337434|gb|DS264427.1| Bifidobacterium adolescentis L2-32 Scfld027 genomic scaffold, whole genome shotgun sequence Length of sequence - 2950 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 1502 1484 ## BDP_2191 cell surface protein + Term 1548 - 1616 13.5 + Prom 1522 - 1581 80.4 2 2 Op 1 . + CDS 1729 - 2202 221 ## gi|154489159|ref|ZP_02030008.1| hypothetical protein BIFADO_02474 3 2 Op 2 . + CDS 2324 - 2948 529 ## BDP_0277 putative sortase-anchored surface protein Predicted protein(s) >gi|148337434|gb|DS264427.1| GENE 1 3 - 1502 1484 499 aa, chain + ## HITS:1 COG:no KEGG:BDP_2191 NR:ns ## KEGG: BDP_2191 # Name: cna # Def: cell surface protein # Organism: B.dentium # Pathway: not_defined # 3 333 492 822 1325 181 40.0 9e-44 TDDDPAAAMLGSIKVPNGNFEDHVTTNGRVYVGGDFSMYNPTVAADVAGVNSNGWEGKTA SVINMDQERHNLPWNGTFNSSCAVIQINKVDSSKNKLAGTTWGVFKNYADAKAGANALRV VKDGGAFDLDNVDNGTIQIGSLNPEATYYVKEITSANGYQVSDKVYRITAGAGGSTVQNV QESADGTTWTDVEGNQIINVKKGASLEWSKVDGSGPSKVLSGSEWQLTTSDGQTAYQITD STKSVESVKIYYNGADSPESIMMKDGIPFDLTASVFGTDNKTDGVPQGVAWTATGSVVVD DNGKVTAVNDGDGTVTACSLAAMNICATVNVTVPTGTIIKPTPKNSTTFYFKADGYTFGN TKLHYSFTPDDTSSWKDAVMTSAEGCTGYLTVTIENPDLKAVTYLFYQGSNWYHKDNSPD GNFATDANQTVATVENYKAVSTAPSGCSTGGGSGSGGSTTTGTVTISGSTEVGLNKSIKL KATTDPANDTITSWSSGDT >gi|148337434|gb|DS264427.1| GENE 2 1729 - 2202 221 157 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489159|ref|ZP_02030008.1| ## NR: gi|154489159|ref|ZP_02030008.1| hypothetical protein BIFADO_02474 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02474 [Bifidobacterium adolescentis L2-32] # 1 157 635 791 791 274 99.0 2e-72 MPAENKAAAETTCSAPAGAAEGRPYDVDPAAGQFKLKGLEWGTYTLVESKAPDGYDVDST VRKFTFGPASGSDGTGQWNSNGVASAAGDATGNFTTSPANYDSSVFNFSVGDIKNQPGVV LPATGGTGNSWIYATAMAVALIGVVAAGMALKVRRRQ >gi|148337434|gb|DS264427.1| GENE 3 2324 - 2948 529 208 aa, chain + ## HITS:1 COG:no KEGG:BDP_0277 NR:ns ## KEGG: BDP_0277 # Name: not_defined # Def: putative sortase-anchored surface protein # Organism: B.dentium # Pathway: not_defined # 1 208 1 200 495 118 45.0 1e-25 MNKVLKGLVAVAATAAMAVAGFAGASTAMADDPTGGIAVEANDTHTYSVYQIFTGTYGSD GSLGNVAAGQNFKTANGAGDGGTNLSVADAAKKVAGLESSASDSMKLETINKFVDLTGDA YGTVSAAAQLSKVPAGYYLAKDKDTVTGNDAATLYIVKVVGNEVVTIARKADKPTFEKKV QDANDSEGTTTGWQDSADYDVNDTVPFK Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:25:12 2011 Seq name: gi|148337433|gb|DS264428.1| Bifidobacterium adolescentis L2-32 Scfld028 genomic scaffold, whole genome shotgun sequence Length of sequence - 2064 bp Number of predicted genes - 5, with homology - 4 Number of transcription units - 4, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 570 - 605 -0.7 2 2 Op 1 . - CDS 673 - 903 191 ## gi|154486229|ref|ZP_02027636.1| hypothetical protein BIFADO_00032 3 2 Op 2 . - CDS 985 - 1134 57 ## - Prom 1200 - 1259 80.4 4 3 Tu 1 . - CDS 1279 - 1452 83 ## gi|154486231|ref|ZP_02027638.1| hypothetical protein BIFADO_00034 - Term 1561 - 1602 9.3 5 4 Tu 1 . - CDS 1635 - 2063 555 ## COG2128 Uncharacterized conserved protein Predicted protein(s) >gi|148337433|gb|DS264428.1| GENE 1 3 - 623 434 206 aa, chain + ## HITS:1 COG:BH0785_2 KEGG:ns NR:ns ## COG: BH0785_2 COG3291 # Protein_GI_number: 15613348 # Func_class: R General function prediction only # Function: FOG: PKD repeat # Organism: Bacillus halodurans # 16 175 135 298 322 97 39.0 1e-20 ASFSDSSSDADGSIASRSWNFGDGSSSTATNPPHTYASAGNYSVSLTVTDNGGASNTKTS TVSVGAGNVNLALNKPTTSSAACNSNESGAKAVNGSVSGGTTDKFCSLASPAWLQVDLGS AQTVSSFTVKHAGAGGEQASWNSKAFTIQTSTNGSTWSTPVSATANTGNTSTHAITATSA RYIKLNVTTPTQNGDPATRIYEFEVR >gi|148337433|gb|DS264428.1| GENE 2 673 - 903 191 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486229|ref|ZP_02027636.1| ## NR: gi|154486229|ref|ZP_02027636.1| hypothetical protein BIFADO_00032 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00032 [Bifidobacterium adolescentis L2-32] # 1 76 1 76 76 142 100.0 8e-33 MFRDTGLYASRVGSDLWTKLGVQVNFNENVWALPKAGLLAVTRGADGFEVIQHSSDEGAS WTVEMSSFDLRRGASR >gi|148337433|gb|DS264428.1| GENE 3 985 - 1134 57 49 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRTRKSRPEQEVSDIARKGRSARREDHARQRKVGKNASRFYSLDSGAT >gi|148337433|gb|DS264428.1| GENE 4 1279 - 1452 83 57 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486231|ref|ZP_02027638.1| ## NR: gi|154486231|ref|ZP_02027638.1| hypothetical protein BIFADO_00034 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00034 [Bifidobacterium adolescentis L2-32] # 1 56 1 56 56 92 100.0 1e-17 MPVVLPRSGLRRGSCFCVIAACFLALAGCVSATFVRDPLRVAAKPDEGSVVVSLTNN >gi|148337433|gb|DS264428.1| GENE 5 1635 - 2063 555 142 aa, chain - ## HITS:1 COG:BMEII0578 KEGG:ns NR:ns ## COG: BMEII0578 COG2128 # Protein_GI_number: 17988923 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 3 142 33 172 175 131 50.0 4e-31 DAKQIRAIALSCAIASRYKPLTQAVEAFAAEKLSAEEIAGAKAAAAVMGMNNIYYRATHL IQNEEYGQLRAGLRMNIMANPGIDKMTFELASLAVSAINGCGACMDSHEKVLRKHEISAQ GVQSALKIAAVVHAVAVVLEQA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:25:28 2011 Seq name: gi|148337432|gb|DS264429.1| Bifidobacterium adolescentis L2-32 Scfld029 genomic scaffold, whole genome shotgun sequence Length of sequence - 2337 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 12/0.000 - CDS 3 - 270 327 ## COG1024 Enoyl-CoA hydratase/carnithine racemase 2 1 Op 2 1/0.000 - CDS 270 - 1043 1001 ## COG1024 Enoyl-CoA hydratase/carnithine racemase - Prom 1238 - 1297 80.3 3 2 Tu 1 . - CDS 1365 - 2159 628 ## COG0491 Zn-dependent hydrolases, including glyoxylases Predicted protein(s) >gi|148337432|gb|DS264429.1| GENE 1 3 - 270 327 89 aa, chain - ## HITS:1 COG:BS_pksI KEGG:ns NR:ns ## COG: BS_pksI COG1024 # Protein_GI_number: 16078778 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Bacillus subtilis # 17 88 6 77 249 63 47.0 7e-11 MSAIVANSESIDDGAPVTLSEAGEGVLLVRMQDRASKNTFSDALIAGLTDAFARIGQRQD CKAVVLTGYDTYFPFCGAQEGLRDLYEGR >gi|148337432|gb|DS264429.1| GENE 2 270 - 1043 1001 257 aa, chain - ## HITS:1 COG:BS_pksH KEGG:ns NR:ns ## COG: BS_pksH COG1024 # Protein_GI_number: 16078777 # Func_class: I Lipid transport and metabolism # Function: Enoyl-CoA hydratase/carnithine racemase # Organism: Bacillus subtilis # 5 255 6 257 259 273 55.0 2e-73 MSRHYESIKVRAEDGVVFVQMHRPPANNAIDDRLIAELGDALSACEAQATVVVLEGLPEV FCSGADFDEIRGRFERGTIQGQDPEPLYELWRRLACGPFVSVAHVRGRANAGGIGFVAAC DLVLAEDAASFSLSELLFGLMPACVLPFLIRRTGIARANYLTLTTQPVSARQALDWGLVD ACEADSANLLRKHLLRLRRLGKDGVARYKRYAVELDDSLAAAKPKALAANREVFGDADNV AKIARFVRSGKFPWEAD >gi|148337432|gb|DS264429.1| GENE 3 1365 - 2159 628 264 aa, chain - ## HITS:1 COG:BS_pksB KEGG:ns NR:ns ## COG: BS_pksB COG0491 # Protein_GI_number: 16078771 # Func_class: R General function prediction only # Function: Zn-dependent hydrolases, including glyoxylases # Organism: Bacillus subtilis # 32 227 19 216 225 165 37.0 8e-41 MSAAVARTHAQADAVVAPEVTLIEVAAGAMKNNNYLVVDPVTRQALLVDPAWQRDKLEAA LQRAGATLSAIAITHAHFDHVHLAGELSAAHDCPVWMSQCEIETSGFDLPRLLAIDETPR TLGALRIEPILAPGHTPGCLCYRIGGHLFAGDVLFIEGCGLCRDEAAAHAMFGSLERLKR ELAPDTRIHPGHTYLRGPGVPFAELLRWNMYLQFPDKRSFAAYRLRRGLHPLQVGRLPLS AAAPQPQNPAPTSSRPINRQSYRT Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:25:29 2011 Seq name: gi|148337431|gb|DS264430.1| Bifidobacterium adolescentis L2-32 Scfld0210 genomic scaffold, whole genome shotgun sequence Length of sequence - 2910 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 2 - 584 151 ## COG0732 Restriction endonuclease S subunits 2 1 Op 2 . - CDS 618 - 1670 1082 ## Swol_2258 type I restriction-modification system, M subunit - Prom 1786 - 1845 80.3 3 2 Tu 1 . - CDS 1847 - 2572 908 ## COG0286 Type I restriction-modification system methyltransferase subunit Predicted protein(s) >gi|148337431|gb|DS264430.1| GENE 1 2 - 584 151 194 aa, chain - ## HITS:1 COG:MJ1218 KEGG:ns NR:ns ## COG: MJ1218 COG0732 # Protein_GI_number: 15669403 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanococcus jannaschii # 1 193 34 220 425 130 37.0 1e-30 MRLVKGKPPAQQRYYGADSAWYLTPEYLRGAAACERAKPSANAVHIRDGDTVLLWDGSNA GEVLLGRSGVLASTMTRVSSDSRFTPSYFFFALKQWESYLKSQTSGSGIPHVDKEVLGKL EITEFAESEQSKIAEVLSTVDRAIAQTKELIAKQQRIKIGLMRDLLTLGIDEAGQLRSEA THAFEDSPLGRIPM >gi|148337431|gb|DS264430.1| GENE 2 618 - 1670 1082 350 aa, chain - ## HITS:1 COG:no KEGG:Swol_2258 NR:ns ## KEGG: Swol_2258 # Name: not_defined # Def: type I restriction-modification system, M subunit # Organism: S.wolfei # Pathway: not_defined # 1 349 546 890 891 363 55.0 6e-99 MEADAALTQTLARHQSALADWWQLASNDFAELENAGNGGRKTPEIRRELIASLKEKLTPL AVLDEFKSAGLFVNWWQQIRYDIKTIVASGWHHSLIPDAYLIAAFFQKDADAIDALEAKI AEAQAELDEAVEAAVEVAAWEPETDEKATAAVLKKALKALIDDLDNATGASADKERTALK AQDKAIKAIETRIKDAKAKHKTQRAELAEKLELKRSGGEAFKAEQHTQIAQIAQRMSKLD ANKLADLKQAAALAGDKEVLQARIARTDALLAAIGGQITDEQARRLILQKIDDLARAELT RYLNAEKRTLVASVDNLWDKYAVSSRLLEAARGETLKVLDGMLAGLGYVK >gi|148337431|gb|DS264430.1| GENE 3 1847 - 2572 908 241 aa, chain - ## HITS:1 COG:BMEII0451 KEGG:ns NR:ns ## COG: BMEII0451 COG0286 # Protein_GI_number: 17988796 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Brucella melitensis # 5 237 13 223 518 169 42.0 6e-42 MTSDKVTLAQLESFLMGAADILRGKMDASEFKEFIFGMLFLKRLSDEFDAKRQRLRTHDF VHLVDQPELLAELLEDQTSYGETFYVPVRARWNETWRDEDGATVPALKDLKHDIGAMLNK AIAALEDNNDSLAGVLKSNINFNEVKGKTKIADQKWKDLLDHFNQFGPLVNDRFEFPDLL GAAYEYLIKYFADSAGKKGGEFYTPAEVVRLLVQITKPAAGQAIYDPTVGSGGFLIQAHP S Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:25:36 2011 Seq name: gi|148337429|gb|DS264431.1| Bifidobacterium adolescentis L2-32 Scfld0211 genomic scaffold, whole genome shotgun sequence Length of sequence - 2419 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 8 - 868 1223 ## COG3451 Type IV secretory pathway, VirB4 components + Prom 870 - 929 80.3 2 2 Op 1 . + CDS 971 - 1678 925 ## gi|154487260|ref|ZP_02028667.1| hypothetical protein BIFADO_01104 3 2 Op 2 . + CDS 1734 - 2418 951 ## gi|154487261|ref|ZP_02028668.1| hypothetical protein BIFADO_01105 Predicted protein(s) >gi|148337429|gb|DS264431.1| GENE 1 8 - 868 1223 286 aa, chain + ## HITS:1 COG:BMEII0028 KEGG:ns NR:ns ## COG: BMEII0028 COG3451 # Protein_GI_number: 17988372 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirB4 components # Organism: Brucella melitensis # 14 285 252 527 831 268 47.0 7e-72 MTTPTGVNHFGAILNVKEYAEGTYPGILNGLKYLNFEYVITHSFSPMGRQDALKVLDRTK GMMVSSGDKAVSQIVELDYAMDQLASGNFVLGEYHFTFAIYADSQEKLAAQVAAARAELS NAGFVSAKEDMAIAASFYAQFPGNWKYRTRLANVSSLNFLGLSPLHNFATGKQHNNPWGD SVTTLQTTNGQPYYFNFHATHPAENSLGEKAIANTMVIGKSGTGKTALINFLLSQVQKLK PTPTIFFFDKDRGAEIFVRACGGNYLALDNGQPTGFNPFQCENNAS >gi|148337429|gb|DS264431.1| GENE 2 971 - 1678 925 235 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487260|ref|ZP_02028667.1| ## NR: gi|154487260|ref|ZP_02028667.1| hypothetical protein BIFADO_01104 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01104 [Bifidobacterium adolescentis L2-32] # 13 235 1 223 223 385 99.0 1e-105 MLPRPAQAQFCYLVYGYPVGICATEGTQWANQATLLKNVTSEINKIRQMEQQLTQEKNRL EALKTGNFGLNVSTTERVKIAELKQRDLSYGMDGMCVKGKSSVAEEQLKYCRKGVEIRNR RYNALVQMFKDMDARDAEIRALEKDSKSVPASNIGRIEKNTAKIAQVRAQIQIDMQNNVA LLKSYEKMIEAIDGEMALLASKALVNKKTGKDAIGQIAQGAMLSAGLKVARSRDM >gi|148337429|gb|DS264431.1| GENE 3 1734 - 2418 951 228 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487261|ref|ZP_02028668.1| ## NR: gi|154487261|ref|ZP_02028668.1| hypothetical protein BIFADO_01105 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01105 [Bifidobacterium adolescentis L2-32] # 1 228 1 228 228 379 100.0 1e-104 MNHESSSRFSASVLSLALSVAVGIAAMTPVPAHAFLASEITQVLNKVQLELQKAKLIQQL TELKKQVSTLTDTYNSMNVGNFNLNTVAGFREGKMEELQKRGVNQDMDTLCQMGKSGVAT EQYKICQRIVQIRNLRFNVMVDMLKKVEERDKEVQKLVGNTNGISAASGSGQVTKNTNQT SQLSVQMDADFQNGKYLLDAYTAVLETLNDDMIAQAEKALKNKKDKND Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:25:59 2011 Seq name: gi|148337428|gb|DS264432.1| Bifidobacterium adolescentis L2-32 Scfld0212 genomic scaffold, whole genome shotgun sequence Length of sequence - 2158 bp Number of predicted genes - 4, with homology - 1 Number of transcription units - 2, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 2 - 895 773 ## Cyan8802_3142 type I site-specific deoxyribonuclease, HsdR family - Term 1101 - 1170 31.4 2 2 Op 1 . - CDS 1340 - 1456 97 ## 3 2 Op 2 . - CDS 1570 - 1740 108 ## 4 2 Op 3 . - CDS 1777 - 2076 490 ## Predicted protein(s) >gi|148337428|gb|DS264432.1| GENE 1 2 - 895 773 297 aa, chain + ## HITS:1 COG:no KEGG:Cyan8802_3142 NR:ns ## KEGG: Cyan8802_3142 # Name: not_defined # Def: type I site-specific deoxyribonuclease, HsdR family # Organism: Cyanothece_PCC8802 # Pathway: not_defined # 1 296 753 1041 1042 392 65.0 1e-107 GLTDLTDHDACFDVFYDEDVRFSFMLAFKKFARALNTLFPAKEALAYIHDFQSLNEVNIL AGKHFRDARLSMQGIPPKLRAIADAHLASNGIDIKIAPISILDEDFEKDVREHKRNKTKA AEVEHAIRHHLDVELDDDPDLQASFAEAMAAIFAEFKDNWQKIYEELEKLRQRIKDAGKE PTYGLHRKKQMPFFRLFQTELGGVMNQHPDYAGKPDERIAVLVDLTQQVYNAVERELKLT GFWESIPARNKLKAEVQLVLLAPQFANVSGLVRKRDAIISRVMELAEAKNDTILYAA >gi|148337428|gb|DS264432.1| GENE 2 1340 - 1456 97 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAFKIDNKIKGYRVVPPEDLAKDAVRLCCRRERARRAG >gi|148337428|gb|DS264432.1| GENE 3 1570 - 1740 108 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKAVKAVKKAAAKKAPVNKAAAKKAPAKKAAKKAVKKAAAKKAPAKKAAKKAAKR >gi|148337428|gb|DS264432.1| GENE 4 1777 - 2076 490 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSNGNGVTATLTQAAENVKETASNLGSAIATRAEEAVASVKQTAKRARKAAKKAVGDAKK KLAKASATAKKEASSLKAKATGKKAAAKKTAKKAAKKVA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:26:20 2011 Seq name: gi|148337427|gb|DS264433.1| Bifidobacterium adolescentis L2-32 Scfld0213 genomic scaffold, whole genome shotgun sequence Length of sequence - 1523 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 215 248 ## gi|154487266|ref|ZP_02028673.1| hypothetical protein BIFADO_01110 2 2 Tu 1 . + CDS 263 - 583 95 ## 3 3 Tu 1 . - CDS 908 - 1522 748 ## COG0205 6-phosphofructokinase Predicted protein(s) >gi|148337427|gb|DS264433.1| GENE 1 2 - 215 248 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487266|ref|ZP_02028673.1| ## NR: gi|154487266|ref|ZP_02028673.1| hypothetical protein BIFADO_01110 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01110 [Bifidobacterium adolescentis L2-32] # 1 71 1 71 71 131 100.0 2e-29 MKGRFLVPLMLLVPSVSAVAGQCEDNFTKKGNPLSGQEYFTQVQVPGMSAAAGIGQVRNA GIGRNMAVLDE >gi|148337427|gb|DS264433.1| GENE 2 263 - 583 95 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNACGGRLPQSVGRFNVFRLATGPGAGIGDVAHRCAAAGPGRVQSYLSRRFVKGFVNRVH HCSRALILICDLIWLIFPFQRYLSCTCLMTEQKPHNMSGLTLFLAS >gi|148337427|gb|DS264433.1| GENE 3 908 - 1522 748 204 aa, chain - ## HITS:1 COG:XF0274 KEGG:ns NR:ns ## COG: XF0274 COG0205 # Protein_GI_number: 15836879 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphofructokinase # Organism: Xylella fastidiosa 9a5c # 2 203 68 269 427 261 73.0 5e-70 GSAAAIRALGHTPERGVRLVPAQLKALDADRARYERLLAVFQAHDVRWFLYNGGNDSADT ALKVSQLAAEYGYPLTCVGVPKTVDNDLAVTDCCPGFGSAAKYTAVSVREAALDVAAMAE TSTKVFVYEAMGRHAGWLAAAAGLAGDGADAAPHLILFPERPYEEADFFAKVKATVERVG YCVVVASEGIQTADGRFVADAGGG Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:26:33 2011 Seq name: gi|148337426|gb|DS264434.1| Bifidobacterium adolescentis L2-32 Scfld0214 genomic scaffold, whole genome shotgun sequence Length of sequence - 1967 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 181 - 215 2.2 1 1 Tu 1 . - CDS 378 - 869 584 ## COG0583 Transcriptional regulator - Prom 1065 - 1124 80.3 2 2 Tu 1 . - CDS 1200 - 1907 885 ## COG0172 Seryl-tRNA synthetase Predicted protein(s) >gi|148337426|gb|DS264434.1| GENE 1 378 - 869 584 163 aa, chain - ## HITS:1 COG:STM0952 KEGG:ns NR:ns ## COG: STM0952 COG0583 # Protein_GI_number: 16764313 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Salmonella typhimurium LT2 # 1 124 179 302 303 94 41.0 7e-20 MGRPTNPDELAEHVTLSISEDDARQRWELHGPDGEVRKVELKPRVMGFDFPMLMALAEQG VGITLLPETVCAEAVRRGELEVVLPNWRLPQGIFHAVFASRRGLLPAVRVFIDFLAEKAP SLVESARLQCSDIKGGPCPDSISGRDGKGAKKADKGAGVPAQA >gi|148337426|gb|DS264434.1| GENE 2 1200 - 1907 885 235 aa, chain - ## HITS:1 COG:XF2286 KEGG:ns NR:ns ## COG: XF2286 COG0172 # Protein_GI_number: 15838877 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Xylella fastidiosa 9a5c # 1 231 202 428 432 367 76.0 1e-101 MPLTVNADSMRGTGQLPKFEDDLFATVVGEGEAASKRYLIPTSEVPLTNVVRDEIVEADA LPLRMTAHSMCFRAEAGSAGRDTRGMIRQHQFEKVELVTIARPEESYAEHERMTRCAEVV LEALGLPYRRMLLCSGDMGFAAAKTYDLEVWLPSENRYREISSCSNCEAFQARRMQARWR NPATGKPEPVHTLNGSGVAIGRAMIAVMENYQNADGSIAVPEALRRYMGGIEVLA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:26:34 2011 Seq name: gi|148337425|gb|DS264435.1| Bifidobacterium adolescentis L2-32 Scfld0215 genomic scaffold, whole genome shotgun sequence Length of sequence - 2066 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 10/0.000 + CDS 15 - 401 455 ## COG0841 Cation/multidrug efflux pump 2 1 Op 2 10/0.000 + CDS 403 - 864 595 ## COG0841 Cation/multidrug efflux pump + Term 912 - 980 14.2 + Prom 884 - 943 80.4 3 2 Tu 1 . + CDS 1030 - 2065 1135 ## COG0841 Cation/multidrug efflux pump Predicted protein(s) >gi|148337425|gb|DS264435.1| GENE 1 15 - 401 455 128 aa, chain + ## HITS:1 COG:alr4267 KEGG:ns NR:ns ## COG: alr4267 COG0841 # Protein_GI_number: 17231759 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Nostoc sp. PCC 7120 # 3 92 743 832 844 112 56.0 2e-25 MVKNAIILIDKVNQLREHGVAKREALIEGARSRLRPIIMTTLCTLFGFLPLAIATGEGAE VRSPMAITVIGGLLVSTLLTLVVIPVVYDLLDRRGDAYYRERVRKARRRDAAVAETLGHD NDPLTGAH >gi|148337425|gb|DS264435.1| GENE 2 403 - 864 595 153 aa, chain + ## HITS:1 COG:DR0740 KEGG:ns NR:ns ## COG: DR0740 COG0841 # Protein_GI_number: 15805766 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Deinococcus radiodurans # 4 147 28 170 1136 79 31.0 4e-15 MSGVAEISIKRPITTIMLFVSMFVIGLIAAVRLPLESLPDITAPFLLVQLPYDGSTPEEV ERTILRPAEEALATMTGIKRLHGTASSDAATIQMEFKDWDRDIAIAASEARERIDAIVDD LPDGFQRYFVFKWSSADQAILQVRLAGDMEPEP >gi|148337425|gb|DS264435.1| GENE 3 1030 - 2065 1135 345 aa, chain + ## HITS:1 COG:aq_786 KEGG:ns NR:ns ## COG: aq_786 COG0841 # Protein_GI_number: 15606161 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Aquifex aeolicus # 7 345 617 954 1000 144 26.0 2e-34 MENTKPLVEAISKALPKSAKAEISMGQDEGGGQNGGKSVQVQLVGDSTETLSELAGDIVP ILARRKELRDVRVDIGDRNTELNVRVDRERAASFGFSVEEVSRFVGLALRGAQLRDFQRG ETEVPVWARFAGAENYGIENLSEFTVRAADGRSVPLLAMVDVAVRPTASQINRNNRQTTL TIQASLNGKATTPEARKAMEETLKTVAFPAGYNYSFDGSSFERDDDAGKQMMFNLIIALV MIYVVMAAVFESLLFPAAIMSCVVFSIFGVFWLFWITGSSFTVMAFIGILVLMGVVVNNG IVMVEHINNLRRRGLSRNEALVEGSRERLRPIMMTMGTAILAMIP Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:27:12 2011 Seq name: gi|148337424|gb|DS264436.1| Bifidobacterium adolescentis L2-32 Scfld0216 genomic scaffold, whole genome shotgun sequence Length of sequence - 128727 bp Number of predicted genes - 88, with homology - 80 Number of transcription units - 55, operones - 21 average op.length - 2.6 N Tu/Op Conserved S Start End Score pairs(N/Pv) - SSU_RRNA 1 - 727 99.0 # DQ806379 [D:1..1179] # 16S ribosomal RNA # uncultured bacterium # Bacteria; environmental samples. + Prom 752 - 811 80.4 1 1 Tu 1 . + CDS 912 - 1070 123 ## - Term 1422 - 1452 -0.9 2 2 Tu 1 . - CDS 1456 - 2898 1085 ## BAD_1292 DNA polymerase III - Prom 3090 - 3149 1.7 + Prom 3070 - 3129 4.5 3 3 Op 1 . + CDS 3184 - 4632 1587 ## COG0076 Glutamate decarboxylase and related PLP-dependent proteins 4 3 Op 2 . + CDS 4684 - 4911 120 ## gi|154488204|ref|ZP_02029321.1| hypothetical protein BIFADO_01778 5 3 Op 3 . + CDS 4982 - 6397 1420 ## COG0531 Amino acid transporters + Term 6452 - 6506 14.2 - Term 6447 - 6486 7.4 6 4 Op 1 . - CDS 6518 - 7174 967 ## COG0242 N-formylmethionyl-tRNA deformylase 7 4 Op 2 . - CDS 7198 - 8577 1778 ## COG1109 Phosphomannomutase - Prom 8811 - 8870 2.7 - Term 8904 - 8962 17.3 8 5 Op 1 . - CDS 9182 - 11791 3753 ## COG0308 Aminopeptidase N - Term 11806 - 11850 7.3 9 5 Op 2 9/0.000 - CDS 11879 - 13858 2711 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily - Term 13900 - 13947 -0.7 10 5 Op 3 . - CDS 13968 - 14885 1204 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 11 5 Op 4 . - CDS 14941 - 16227 1355 ## COG2807 Cyanate permease 12 5 Op 5 . - CDS 16319 - 17242 772 ## COG1737 Transcriptional regulators - Prom 17285 - 17344 1.7 13 6 Tu 1 . + CDS 17136 - 17354 191 ## 14 7 Tu 1 . + CDS 17621 - 18286 405 ## COG0044 Dihydroorotase and related cyclic amidohydrolases - Term 18290 - 18340 0.4 15 8 Tu 1 . - CDS 18387 - 21419 3132 ## COG2217 Cation transport ATPase - Prom 21473 - 21532 2.4 + Prom 21391 - 21450 1.8 16 9 Tu 1 . + CDS 21506 - 21796 343 ## COG1937 Uncharacterized protein conserved in bacteria - Term 21810 - 21854 8.1 17 10 Op 1 . - CDS 21874 - 22626 1144 ## COG0289 Dihydrodipicolinate reductase 18 10 Op 2 . - CDS 22797 - 24164 1714 ## COG0477 Permeases of the major facilitator superfamily 19 10 Op 3 . - CDS 24161 - 24895 758 ## BDP_1765 hypothetical protein 20 11 Op 1 5/0.000 - CDS 25069 - 29166 4266 ## COG0210 Superfamily I DNA and RNA helicases 21 11 Op 2 . - CDS 29181 - 33257 3667 ## COG0210 Superfamily I DNA and RNA helicases - Prom 33343 - 33402 1.8 22 12 Tu 1 . + CDS 33531 - 34952 1619 ## COG0515 Serine/threonine protein kinase 23 13 Op 1 . + CDS 35089 - 41157 6436 ## BAD_1311 fibronectin type III domain-containing protein 24 13 Op 2 . + CDS 41230 - 42597 1601 ## COG0714 MoxR-like ATPases 25 13 Op 3 . + CDS 42647 - 43867 1228 ## BAD_1313 hypothetical protein 26 13 Op 4 . + CDS 43864 - 46335 2287 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 27 13 Op 5 . + CDS 46332 - 47192 926 ## COG0631 Serine/threonine protein phosphatase 28 13 Op 6 . + CDS 47226 - 47960 822 ## BAD_1316 hypothetical protein + Term 47995 - 48038 12.2 - Term 47980 - 48029 11.5 29 14 Tu 1 . - CDS 48122 - 48790 630 ## BAD_1317 hypothetical protein - Prom 48942 - 49001 4.5 + Prom 48754 - 48813 2.2 30 15 Op 1 . + CDS 48836 - 48955 60 ## 31 15 Op 2 . + CDS 48903 - 49859 968 ## BDP_1780 hypothetical protein + Term 49939 - 49982 8.4 - Term 49917 - 49978 15.1 32 16 Op 1 58/0.000 - CDS 50018 - 54031 5499 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit 33 16 Op 2 . - CDS 54126 - 57686 850 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 34 17 Op 1 . - CDS 57849 - 58493 627 ## BAD_1320 hypothetical protein 35 17 Op 2 . - CDS 58562 - 59566 886 ## COG1194 A/G-specific DNA glycosylase 36 18 Tu 1 . + CDS 59587 - 60270 876 ## COG0219 Predicted rRNA methylase (SpoU class) + Term 60293 - 60337 7.3 - Term 60276 - 60330 9.8 37 19 Op 1 9/0.000 - CDS 60339 - 61703 1992 ## COG2848 Uncharacterized conserved protein 38 19 Op 2 . - CDS 61770 - 62042 449 ## COG3830 ACT domain-containing protein - Prom 62215 - 62274 7.8 - Term 62200 - 62238 1.7 39 20 Op 1 8/0.000 - CDS 62283 - 63533 1709 ## COG0153 Galactokinase 40 20 Op 2 . - CDS 63565 - 64815 1703 ## COG1085 Galactose-1-phosphate uridylyltransferase 41 20 Op 3 . - CDS 64820 - 65641 900 ## COG1349 Transcriptional regulators of sugar metabolism 42 21 Tu 1 . + CDS 65826 - 66974 1326 ## COG0167 Dihydroorotate dehydrogenase + Term 66978 - 67026 7.2 43 22 Tu 1 . - CDS 67227 - 68348 1220 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family - Term 68436 - 68469 5.1 44 23 Tu 1 . - CDS 68574 - 70874 2593 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Term 70965 - 70994 -0.9 45 24 Tu 1 . - CDS 70999 - 71739 745 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 46 25 Tu 1 . - CDS 71831 - 72916 847 ## COG0095 Lipoate-protein ligase A 47 26 Tu 1 . - CDS 73168 - 74037 1045 ## COG2314 Predicted membrane protein - Prom 74102 - 74161 1.7 - Term 74091 - 74138 3.1 48 27 Tu 1 . - CDS 74245 - 75285 1538 ## COG0473 Isocitrate/isopropylmalate dehydrogenase - Term 75442 - 75480 7.0 49 28 Op 1 . - CDS 75497 - 79876 3725 ## COG4886 Leucine-rich repeat (LRR) protein 50 28 Op 2 . - CDS 79906 - 86682 7932 ## COG4932 Predicted outer membrane protein - Term 86973 - 87020 14.3 51 29 Op 1 . - CDS 87048 - 89540 2375 ## COG1770 Protease II - Prom 89560 - 89619 2.2 52 29 Op 2 . - CDS 89667 - 90971 1368 ## COG4850 Uncharacterized conserved protein 53 30 Op 1 . - CDS 91179 - 91592 508 ## COG0509 Glycine cleavage system H protein (lipoate-binding) 54 30 Op 2 . - CDS 91639 - 93471 2279 ## COG1376 Uncharacterized protein conserved in bacteria - Prom 93512 - 93571 1.7 - Term 93547 - 93582 -0.7 55 31 Tu 1 . - CDS 93621 - 94718 1072 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding - Prom 94756 - 94815 4.6 56 32 Op 1 . - CDS 94866 - 95726 972 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 57 32 Op 2 . - CDS 95801 - 96412 784 ## BAD_1348 hypothetical protein - Prom 96578 - 96637 1.9 + Prom 96515 - 96574 4.6 58 33 Op 1 . + CDS 96618 - 97022 605 ## COG0526 Thiol-disulfide isomerase and thioredoxins + Prom 97031 - 97090 3.3 59 33 Op 2 . + CDS 97181 - 98176 1334 ## COG3583 Uncharacterized protein conserved in bacteria + Term 98193 - 98243 21.5 - Term 98565 - 98621 12.0 60 34 Tu 1 . - CDS 98653 - 99141 435 ## BAD_1353 hypothetical protein - Prom 99175 - 99234 3.8 - Term 99327 - 99368 0.2 61 35 Tu 1 . - CDS 99375 - 101162 1739 ## BDP_2037 hypothetical protein - Prom 101206 - 101265 2.6 - Term 101244 - 101287 9.3 62 36 Op 1 . - CDS 101313 - 102977 1081 ## COG2148 Sugar transferases involved in lipopolysaccharide synthesis - Prom 103005 - 103064 1.8 63 36 Op 2 . - CDS 103100 - 104359 1018 ## BDP_1858 hypothetical protein - Prom 104555 - 104614 3.2 - Term 104415 - 104471 4.4 64 37 Tu 1 . - CDS 104636 - 106123 1362 ## COG0489 ATPases involved in chromosome partitioning + Prom 105884 - 105943 2.9 65 38 Tu 1 . + CDS 106047 - 106535 272 ## BDP_1394 excinuclease ABC subunit C + Prom 106572 - 106631 4.3 66 39 Op 1 . + CDS 106836 - 107978 919 ## COG1106 Predicted ATPases 67 39 Op 2 . + CDS 108059 - 108634 138 ## BL1235 hypothetical protein - Term 108585 - 108618 -0.4 68 40 Tu 1 . - CDS 108744 - 109385 383 ## Snas_0319 hypothetical protein - Prom 109516 - 109575 2.8 69 41 Tu 1 . - CDS 109808 - 110227 206 ## gi|154488276|ref|ZP_02029393.1| hypothetical protein BIFADO_01850 - Term 110283 - 110316 -1.0 70 42 Op 1 . - CDS 110340 - 110558 255 ## BL0227 glucose-1-phosphate thymidylyltransferase 71 42 Op 2 . - CDS 110583 - 111317 284 ## HMPREF0421_20085 hypothetical protein 72 42 Op 3 . - CDS 111391 - 112743 595 ## COG1106 Predicted ATPases - Prom 112781 - 112840 5.3 + Prom 112929 - 112988 3.2 73 43 Tu 1 . + CDS 113198 - 114271 1399 ## Blon_2087 proline symporter 74 44 Op 1 . - CDS 114543 - 115034 255 ## Balac_0578 hypothetical protein 75 44 Op 2 . - CDS 115027 - 115533 267 ## COG3600 Uncharacterized phage-associated protein 76 44 Op 3 . - CDS 115612 - 115827 233 ## gi|154488284|ref|ZP_02029401.1| hypothetical protein BIFADO_01858 - Prom 115894 - 115953 1.8 + Prom 115851 - 115910 3.1 77 45 Tu 1 . + CDS 115935 - 116198 133 ## + Term 116359 - 116396 0.3 - Term 116347 - 116402 0.2 78 46 Tu 1 . - CDS 116558 - 116722 93 ## + Prom 116771 - 116830 2.8 79 47 Tu 1 . + CDS 116921 - 118012 538 ## BLLJ_0808 hypothetical protein + Term 118110 - 118151 7.9 - Term 118148 - 118186 2.5 80 48 Op 1 11/0.000 - CDS 118189 - 119094 1102 ## COG1209 dTDP-glucose pyrophosphorylase 81 48 Op 2 . - CDS 119170 - 120612 1558 ## COG1091 dTDP-4-dehydrorhamnose reductase - Prom 120654 - 120713 4.2 82 49 Tu 1 . + CDS 120538 - 120747 139 ## + Term 120827 - 120861 8.3 - Term 120813 - 120849 8.7 83 50 Tu 1 . - CDS 120872 - 121894 1000 ## COG1088 dTDP-D-glucose 4,6-dehydratase - Prom 121987 - 122046 6.8 + Prom 122164 - 122223 4.2 84 51 Tu 1 . + CDS 122330 - 126139 4719 ## COG0366 Glycosidases + Term 126176 - 126218 5.5 + Prom 126654 - 126713 3.4 85 52 Tu 1 . + CDS 126738 - 126926 73 ## 86 53 Tu 1 . - CDS 126861 - 127508 606 ## gi|154487980|ref|ZP_02029097.1| hypothetical protein BIFADO_01548 - Prom 127530 - 127589 80.4 + Prom 127515 - 127574 80.3 87 54 Tu 1 . + CDS 127758 - 128000 64 ## 88 55 Tu 1 . - CDS 128217 - 128726 -232 ## gi|154487969|ref|ZP_02029086.1| hypothetical protein BIFADO_01537 Predicted protein(s) >gi|148337424|gb|DS264436.1| GENE 1 912 - 1070 123 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRHRHDDSRNKKIDDRLIRKGASHKNLTVLQGLPATRKERTMNWQSLTIKK >gi|148337424|gb|DS264436.1| GENE 2 1456 - 2898 1085 480 aa, chain - ## HITS:1 COG:no KEGG:BAD_1292 NR:ns ## KEGG: BAD_1292 # Name: not_defined # Def: DNA polymerase III # Organism: B.adolescentis # Pathway: not_defined # 2 479 7 513 514 789 80.0 0 MNLSWLDDAKQDIEQWSASMPNDADNQPIDWRWVSSLDLRNGIGAATRQHVDLLAMLRSS SPQLSAPQLHALLKDDLAIRDRLEPTIAQCNSTFMMDYDRLIASYRLPRALAYANRRLCD EIAVLRQIGVAMGLWTVTEERRERVTVPVLLPGSALASGGVALDDIQDRTADIVNGRAAR RAAEKSQKRASDYAMSRANLSGVTSPGGSTLFDYGSETKSAEAAQLRRMAEYRKSDWRDA YLPGRDVDNVMGIDIETTGTDPARVYIIDVGFEYMNMISPRPAAAPTGYQYEQSYYETGD AYGQSRLSFGVPAANATLGNPLILDLTGIDVRDRASGFRLFDEWPEAQIGLLQRLEQQPY VAHNARFEHSFFMLNVAGYAESYRAGKITIIDTLPMSRRWDEGSIPDGEHPYGNNTLDAY AKRQGALDESKSERHLGLEDTHIMLVAMKHHLGVLHGEGRGPWGANGKSGIGGKHCGRRW >gi|148337424|gb|DS264436.1| GENE 3 3184 - 4632 1587 482 aa, chain + ## HITS:1 COG:sll1641 KEGG:ns NR:ns ## COG: sll1641 COG0076 # Protein_GI_number: 16329656 # Func_class: E Amino acid transport and metabolism # Function: Glutamate decarboxylase and related PLP-dependent proteins # Organism: Synechocystis # 34 482 18 467 467 520 53.0 1e-147 MPETHSTTENNNSHCCDNTCGNADDRVVPDSVEINPLFARPKEAQAFSKFTIPQKGSLPE TAYQVVHDEAMLDGNARLNLATFVSTWMDDHANRLYMEAADKNMIDKDEYPKTAEVESRC WHMLADLWHAPDPMNAIGTSTIGSSEACMLGGLALKRRWKEAREKADLPTDHPNLVMSSA VQVCWEKFCNYFDVEPRYVPISEDHKVLDGHDLDKYVDENTIGVVAIMGVTYTGMYEPVE QISEALDRIEERTGLDVRIHVDGASGGMIAPFIQPDLAWDFRVKRVYSISTSGHKYGLVY PGLGWVVWRETADLPESLIFKVSYLGGEMPTFALNFSRPGAQVLLQYYMFLRLGFDGYRR VQQTSHDVAKYLSGEIEQMDDFTLWNDGSDIPVFAWMLNDKPDRKWNLYDLQDRLRMKGW LVPAYPMPVDLTQVTVQRIVVRNGFSHDMAEAFIKDLKSCVKYLDGLRSPMPSEARASGF HH >gi|148337424|gb|DS264436.1| GENE 4 4684 - 4911 120 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488204|ref|ZP_02029321.1| ## NR: gi|154488204|ref|ZP_02029321.1| hypothetical protein BIFADO_01778 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01778 [Bifidobacterium adolescentis L2-32] # 1 75 1 75 75 110 100.0 4e-23 MFIPTTIMFTKAGCNDSSYEKAACCGSARCKRSCTSRVRTFHDERCDGTDNNATQSVCRR RKPQSYGHTCACRGE >gi|148337424|gb|DS264436.1| GENE 5 4982 - 6397 1420 471 aa, chain + ## HITS:1 COG:BMEII0909 KEGG:ns NR:ns ## COG: BMEII0909 COG0531 # Protein_GI_number: 17989254 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Brucella melitensis # 2 450 24 482 510 312 41.0 7e-85 MMTVSQLAMLTVVAVASLRSLPAMADYGLASILLYLIPAVVFLVPTALVAAELATGWKGG VYVWVREAFGNRIGFLAIWLQWIQNVVWYPIQIAFIAVSLSYVFGMGGLGNNGVYVAAVI IVLYWASTMVALRGGNLFAKVGSISGLIGTLFPALLLIVFGIIWLAIGKPVQTSLHASAL LPPWTGIASIVLIVSNVLAYAGMEVNAVHANDLEHPGRQFPRAIALATALILLVLVLPTL AIAFAVPHRELGLIDGINLAFREFFDHFGMGWGTPVISLLIALGAFASVVAWIAGPSRGL LAAARTGLMPPALQKRNAHDVQEGILIPQGIIVTVLALLFVLIPNGNTAFATLVDMATAL YLVMYMLMFAAAIRLRNTHPEVRRTYRVPAIRLVAGVGFVASAAAFVLTFVRPAGFTGLD SVSYAILVAVVVLVLGLPPLVLYGMRKPGWDLRSDAERNTDTYDVLVNPEY >gi|148337424|gb|DS264436.1| GENE 6 6518 - 7174 967 218 aa, chain - ## HITS:1 COG:all2007 KEGG:ns NR:ns ## COG: all2007 COG0242 # Protein_GI_number: 17229499 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Nostoc sp. PCC 7120 # 27 198 4 172 179 91 35.0 9e-19 MFGHNSKVDLELNREVEKLIKTGGKEKIMPIVQAGEPVLRQQTIAYDGQLSRKTLDKLID TMRTTMLEAPGVGLAATQIGLGLALAVVEDHVCEGDDGDPREAAEFPFHAIINPSYEPIG TETRSFYEGCLSFDGYQAVRKRWLDITARWQDEDGNKHEEHLHGWPARIFQHETDHLSGE LYIDQAEIRSLTTNENLEDFWCEDPVPTEAAAELGFEL >gi|148337424|gb|DS264436.1| GENE 7 7198 - 8577 1778 459 aa, chain - ## HITS:1 COG:CAC0484 KEGG:ns NR:ns ## COG: CAC0484 COG1109 # Protein_GI_number: 15893775 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Clostridium acetobutylicum # 1 453 1 443 448 397 50.0 1e-110 MPRMFGTDGVRGLANRDLTAQLALDLGDAAVRVLGDDERSEFESRRRALVGRDTRVSGDF LAAALSAGMSAGGFDVIDAGIIPTPGVAYLTSVLNVEMGAVISASHNPMPDNGIKFFARG GFKLPDTKEDEIEAVLGQDWDRPTGAGVGRVSHDTATATNLYIDHLVSAIAPVGPDKSQP TPLKGLKIVADCANGATSVVAPEALRRAGADVTVINASPDGYNINKNAGSTHPEQLQAMV KASGAVMGVAFDGDADRCLAVDEDGNMVNGDQIMGILARAKKNAGKLNHDTLVVTVMSNL GLKLALRSMGIKTVQTNVGDRYVLEEMLRGDYSLGGEQSGHVINREFATTGDGTLTALTL CNEVVKSGKSLKELAADFPQLPQTLINVPNVDKMAAKTNAKVQAAVEREEKLLGDTGRVL LRPSGTEPLVRVMAEAETQQQADEVCDRLAKVVADELTL >gi|148337424|gb|DS264436.1| GENE 8 9182 - 11791 3753 869 aa, chain - ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 1 867 1 859 861 644 43.0 0 MPGANLTRIEAEERKSIIAAPIHYTVKLDLTRGAKDFGSETTITFDAKPGESSFLDLIAN EVSEITLNGETLDPAEAYADSRIELKGLKEHNEVTVKAMCQYSNTGEGLHRSVDPSDGNV YLYTQFEVPDARRVYAVFDQPDLKAVFDFSVLAAKSWIVTSNMPTSSVTDNETVTEEGTL GDHAAETTKLWVFEPTPTMSSYLTAICAGPYAEWHTEYANEDGRTVPMAMYCRQALAKAF SKDVDYLFDITKKGFAFYAKTWGVPYPYAKFDQIYVPEYNAGAMENIGMVTIRDQYVFES KVTDAYAERRVVTVLHELAHMWFGDYVTMKWWNDLWLNESFAEFTSTLATAEATEWKDAW ATFSSGEKSWALRQDQLSTTHPIVAPINDLNDTYVNFDGITYAKGASVLKQLVYYVGREK FFKGINNYLNKHAYSNATLADLLAELELTSGRDLKAWSAQWLEESGINTIATEVEENEDG TIKRLALRQTAPAEHPVLRAHRLAVGFYNEDPETGKIVRTDRFELDVDGELTVVDAAAGK ARPSLILVNDDDLTYTKLRFDDKSLAFATSNLYRFDDALARSVIWLALWDMTRDGELPAR QFIDTSLAALATEHESTTFRYALAQVSTTAWHYTAPAERAEIVKHVAAELFKLAGQAKAG SDEQFQLVTAYLGYGEPGDEAFVANAKGLLDGSVAFDGLEIDNNFRWTIINALSTVNAID QAGIDAELAKRETTENREFAYGARAVAGTAEAKAWAWNEALHNDELTNMQLEAVAGGFAA TPRADLAEPYAEKYFEVADWIWEHKTFHMAEALLEGLYPGYADPAKLVELGDAWLASHKD ADNALQRIVRGNVEASHRTLKVRDFNAAL >gi|148337424|gb|DS264436.1| GENE 9 11879 - 13858 2711 659 aa, chain - ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 89 645 2 558 558 546 50.0 1e-155 MATEETTKTTTHKRGSKAAKRTETAVKASKTTKAAKSEKTAIKKAKSSTRSRGNGGSRNG GSRGSRGGNGSNRRPSHSAPQSTAPQQDEVLIAPPKYRKGSMRIVPLGGLGEIGRNMNVV EYNGHILLIDCGVLFPEEEQPGVDLILPDFHYIKDRLDKVEALVLTHGHEDHIGGVPYLL KLRPDIPLIGSKLTLAFVEAKCKEHRINPTLVEVKGRDKLKVGPFNLEFVNVTHSIPDAL AVFVQTPAGSLIDTGDIKLDQLPLDHRITDLVEFGKLGEKGVDLLMMDSTNAEVPGFVKP ETSIGPALDQAFAQATRKIIVASFSSHVHRVQQVVDAAHKYGRKVVFVGRSMVRNMSIAA DLGYLRLPEDTVIDLKQAHDVQDDKLVYMCTGSQGEPMAALGRIADGNHRDITINEFDTV ILASSLIPGNEHGVYKVINKLVQLGARVVNRDNAAVHVSGHCNEGELLYMYNIVKPKCAM PIHGENRHLVANGMIAVKTGVDPQNVVLAEDGDVVDLYHGQAAVVGSVPCGYVYVDGDSV GELTDEELEKRRILGTEGFVSSFVVVDTETADVITGPKIYLNAVAEDESEFDKVRHQIVE QLQDAMMQGTRDTYKLQQIMRRTLGGWVARQLHRKPMIVPVVADIAQDVDDAMGLNAAK >gi|148337424|gb|DS264436.1| GENE 10 13968 - 14885 1204 305 aa, chain - ## HITS:1 COG:ML1513 KEGG:ns NR:ns ## COG: ML1513 COG0329 # Protein_GI_number: 15827797 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mycobacterium leprae # 15 305 9 299 300 238 47.0 9e-63 MTSPKTDGTMHLLDPAPFGRILPAMVTPMKADGAVDFEAAQRLAKQLVADGADGLVVNGT TGESPTTHMEEKVELVQAVKEVVDVPVISGAGSNDTAHTVRMVEQTQEAGADAVLVVAPY YSRPSQEGVFRHYKAVNDSADKPIIVYDVPGRTGLHIQLETYRRMAELDHVKAVKDATGD IAGAVRKRMETGLTWYSGDDGLFLPFLSVGAVGIISVIAHAAAGPMRDLANAFDRGDIHE AQRISVQLAPLVEAMNGNGFQAVMAKASLKVRGILDSTEMRLPNVGPGEAELVRAEKGMR AAGLL >gi|148337424|gb|DS264436.1| GENE 11 14941 - 16227 1355 428 aa, chain - ## HITS:1 COG:CAC0161 KEGG:ns NR:ns ## COG: CAC0161 COG2807 # Protein_GI_number: 15893456 # Func_class: P Inorganic ion transport and metabolism # Function: Cyanate permease # Organism: Clostridium acetobutylicum # 6 408 16 407 432 174 28.0 4e-43 MLAYDRSSTGLWVALIFLVSLNLRPAIAAVGPVLAQMGTDLAWGEGVQGVLTAIPLIAFA AVSPLVTFLARRIGIDMSILLALLCIAAGDAIRSFGGGVGIWLGTVVFASAIAVGNVLVP VIAKRDYAGHVAMATGVYSGCITAGSATAGLLSAPLAQMWGGWRASLAFWSVPPLVVAVL WALRILHNRKVVIASAGGTIETSDTGDIDDIGDRSTTANAQNPHSAQRPACSTQSSHGVF TRVLRRPMTWYVTAFMGLQSSAFYTMSNWMPSISASIGYDASTAGVHLFIFQGIGIFSGL LIPKFMNVRGNQVCAALTASAPMLIAGLGMLLLPHLMPVWAFVGGCAQGASLVVALALIA LRGRDSAETVVLSGVAQSFGYLIASLGPLMFGVLVQATGGHHVPLMVFTFVAFLQCVVAV VVGRPSKM >gi|148337424|gb|DS264436.1| GENE 12 16319 - 17242 772 307 aa, chain - ## HITS:1 COG:YPO3259 KEGG:ns NR:ns ## COG: YPO3259 COG1737 # Protein_GI_number: 16123416 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Yersinia pestis # 35 306 11 281 281 135 31.0 1e-31 MSVTSGIMLSDNMGASKDAMDEEGNAAADLGLVARIRESFDSLTATEREAAQFILGHLTD VLVCNSVELSQLSGISQPTLSRLYRKLGYANAGEFRRDVRRVHRPGSPELSRHTQCDDLV ADHLRRDEESLKRTFEGIDRAQLSSACQAMATAPHVAVVGYRSSYPVALHMREQLMRLRG NVDILPNPGQSIGEDLVDYAAGDVIVIIGVGRRLPFFSRLIDVMLERGLTVVVIGDISAR NAVIGRNVAFFKVVLNSHVLTSFTAAFALIALMVDEVGKCLVDTEDEVHARIEGINDCFD ALDELED >gi|148337424|gb|DS264436.1| GENE 13 17136 - 17354 191 72 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRATKPRSAAALPSSSMASFEAPILSESIIPEVTLIALPCSTFSRGASALLTMLPLAFRV SPGLATDNCYDE >gi|148337424|gb|DS264436.1| GENE 14 17621 - 18286 405 221 aa, chain + ## HITS:1 COG:ybbX KEGG:ns NR:ns ## COG: ybbX COG0044 # Protein_GI_number: 16128496 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Escherichia coli K12 # 1 215 224 438 453 160 37.0 1e-39 MRKIVRLVARTGCRTHILHVSSGLSVDVLRRAKAEGLPVSAETCPHYLTLDCDHIPDNAT AVKCCPPIRDLHEQDALWAGLADGTLDGVVTDHSPASADMKAGTLATAWGGVSSLQVGFR AVLTGAMRRGLSLADVVRWMSCNTARLVGLDDRGDITPVLRADLAIIRPYERFVVDATAL ESRNPICACDGMTLNGVVTRTFVAGRDALSGVREGNLIVRP >gi|148337424|gb|DS264436.1| GENE 15 18387 - 21419 3132 1010 aa, chain - ## HITS:1 COG:alr1627 KEGG:ns NR:ns ## COG: alr1627 COG2217 # Protein_GI_number: 17229119 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 162 889 47 749 753 568 45.0 1e-161 MVFAEIESQLRTEGGWNMHIAIALIMALLVTAGVLWFFFAPRKAYRAPLRDGVQEAVVEV KGGYSPAVIEAEAGVPLRLIFDRKEDGECSSHVVFSDFGVDLALPAFRTTTLTLHLDQPG EYPFACGMNMLHGTLRILPGKHASVGAAAGSAVGSVGASMSDSGNSDIRATADGAHASGS AETGVQCAQKGAVQTSGSGDSGKSRGLESEIRALITRLIVAAVCTIPVFGSTMLMLYPMP NWLQFLLMLPIVGYAALPIFRSGFAAIAHRSPEMNALVSLGALAAFAYSCVVTFAPNVLP ENAREPYFEAVGVVVTLMLVGQLLEARARKGTGEAMRALAGLQPKTARVVRDGKETSIAI DDVRVGDIIAIRPGEQLPVDGIVISGTSTVDESMITGEAMPVAKTEGSEVTGATINGGGS LRYRATKVGKDTVLAQIIGMVAAAQSSKAPVQRLADRISGVFVPAVVLIAVWSCALWFAF GPDPRVTHALVAAVSVLLIACPCALGLATPLSVTVSTGRAARMGVLVRSAEALETCGKVN AVVLDKTGTITTGKPTFTDVLPFGKWRRQADDFLTIVAAAERDSEHPLAAAIVAAAAEKA DIADVAELAQTTDFQAIAGRGVTARVTFRGLPHTVAVGNTDLIDDLDVDMPDVTSDTSEI ASETIHDTNLDAIIADMERLSQQGKTPILAAIDGHLAGIVAVADVPKADSRQAIELLRKR GVEAVMLTGDNPTTARAIASQVGIDERHVIAGVRPERKADEIAKLQSQGYTVAMVGDGIN DAPALARANVGFAIGTGTDVAIQSADVTLMGGSLMGLVHALDLTHAAMRNIAQNLGFALG YNSIGIVIAAGVLYPFTGTLLNPMIAGAAMAFSSLCVVTNASRLRLFDPDAEAAKNKTYR VRKPDPSKNNGNQHSRKGTIMGLFSDHKAKKEAENMGAMGAGHCCGGHDGHGMASNMGDS AANVAKDPVCGMSVDPATAAATREYGGVTYYFCNPGCADKFAQNPAAYLG >gi|148337424|gb|DS264436.1| GENE 16 21506 - 21796 343 96 aa, chain + ## HITS:1 COG:Cgl0381 KEGG:ns NR:ns ## COG: Cgl0381 COG1937 # Protein_GI_number: 19551631 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 6 96 9 99 100 102 62.0 2e-22 MNATQHGYASDQKRIIARLNRIEGQVRGIRQMTENGEYCIDILTQISAADSALKSVALLL LDDHLHHCVAKAAAEGGTVADEKLAEVSAAIARLAK >gi|148337424|gb|DS264436.1| GENE 17 21874 - 22626 1144 250 aa, chain - ## HITS:1 COG:MT2843 KEGG:ns NR:ns ## COG: MT2843 COG0289 # Protein_GI_number: 15842311 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 2 250 1 244 245 243 60.0 2e-64 MIKVSVVGAKGRMGSHVVDAVDSAADTELALALDAGDDLTAITPENTDVVVEFTVPSVSL GNVLALVKQGVDVVVGTTGWTEEKLDQVRAALAAAPREGQSVFIAPNFAISAVLADHFAK VAAPYFESAEVIELHHPTKVDAPSGTAFHTAQGIAEARKAAGLGPVPDATETDGGSRGQV VDGIHVHAVRLRGLNAHEEVLFGNSGEQLTIRADSFDRISFMPGVLLAVRKVSTGTYPGL TVGLDHFLDL >gi|148337424|gb|DS264436.1| GENE 18 22797 - 24164 1714 455 aa, chain - ## HITS:1 COG:mll7465 KEGG:ns NR:ns ## COG: mll7465 COG0477 # Protein_GI_number: 13476206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 20 424 2 362 407 158 30.0 2e-38 MTGAKPQSQSHEPHESQKTQSPYAQLFRIPGTKAFCVSGAIARLPMSMMGLGIVLALNHM YDNWTIAGVMSAAYVLATAAVTPLYARLFDRFGQRKVGPVILTVQIIVMLGFAFAALMRV PIPLLFVLAVVMGMTQFSFGALVRTRWAYVLDRADKEDLLNTAYALESAIDEIVFIFGPI LAAFLAASVHPVSQLFVPTLACAFGGAVFFALRDTQPPVLREITVVAADTDDADVRLAAG GAAGAAVSADRFDLDRLKTGDRDRNKRNVLTYAGVLPLLAVFIVFNMAFTAFDTSMTAVM KSLHLDSVLGVQLAMLAVGSCMGALVFGSRELKGSRWRHMIMFLALMTVGFVVIHLCQGN LIVMGLVEILTGLTISPVFASGNLLVKETVPEESLTEGLSWVSTAGTMGASFGSMITGIV LDHFDPGVGLSLPAVFVGCSIPFALIGWLLVRRRG >gi|148337424|gb|DS264436.1| GENE 19 24161 - 24895 758 244 aa, chain - ## HITS:1 COG:no KEGG:BDP_1765 NR:ns ## KEGG: BDP_1765 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 244 1 234 235 318 68.0 1e-85 MAANSATAIPNAGMGAGTNNASAIVFRPIGWGDLDAVVDLFDRTWPQDVDKVGADMSRLI SRYFVLHYLLPTTFANGAFAADGTLAGVTFIRVAGEAPQLDEIEVGEEMKALERRIDADP EAAKHMAALKSGFSVELDLEREGRANETTMGELELFIVNPDVRGHGVGGRLWRRMQEHFA AWDVPAFYLHTDSDCDVSFYDHKGLDCIAHRTASETVARLGGSADGEVPPLFDDMFIYRG KVTA >gi|148337424|gb|DS264436.1| GENE 20 25069 - 29166 4266 1365 aa, chain - ## HITS:1 COG:Cgl0752_1 KEGG:ns NR:ns ## COG: Cgl0752_1 COG0210 # Protein_GI_number: 19552002 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 32 933 21 791 812 174 25.0 8e-43 MNGSMSTNGATAKGDAMGTVPAATPKFTDSPEQAAVIQAPSYEDVVVVAGAGSGKTYTMT RRIITLIDQGISPEKILGLTFTRKAASELLSRVSAAVTRNQAGRGTRVAFLKPEVSTYDA FFQTIVRQYGLLVGFDQNTQPLSEAGALQLIHTVLDKHMDQLMAFDQGGDELGKFSTIAG NVFTLSNAIAGAMIGSDCTSFDEAVERVRAWDKAFVAQVAKALEDEDVPDDEPKVGKAPK QKKKESDTAFETRMREYRAQCHQLCVYKTAQLAGTARKRDLLLDLVADYHAEKRALNMAE FSDFTIAAFQLVTRFPSIGATYRKRYTHVLLDEYQDTSTTQAALLAALFHADSTHRSAVN AVGDPFQSIYAWRGASPGAFRMLQHDFGHDATDKPYTLTVTRRNSRMVLEAANNLTKPLR LPARRRGSSLMREVDVPPLANIDNAPEGTLGVLGYATFGQEIDAIVRFAKQAIALHTPTE NELADGAKDNRPHVALLFRSKTQMPAYEDALEQAGLTTLVVGQAALLERPEIKDILALLH VVCDHTDSAALMRLLATPRFGLSADDLQALAGIAERLNTAQRYRALVSAGIVEADANPSD ADIRATVRAYRDQVPNAVFLIDVLLRGDLRHLVDGVLSRTGAASVIHAGRVIQQVQRTAG HPLPEVVRTAITALGLDIDLLLAERMRHPDAGNRVTSHAASSLDAMLSLVDTYLQEIAAQ GTPSLRAFISWVDSLRDASDDNATAPDTPVDVVLMTVHQSKGLEWDAVAVVGMRDGTFPS SQGDRLSVKTDEDHPGGRRDGVWEPPEYFEKAHTWLEDPSAVPVPVRADADILPRFPHDA PIGGNPVESLDGLDDAEVIDDEVFGTLRTMAVDDMEGMDPASLYLTQQEEYGRRLHADER RLAYVALTRARYEALLVYSGCNETSRDSRLAEGKKSAAPSNFWLETRDSMNGIVTAVREP DNLSDDVDGSPHTLGLDLPDGYFVGEHARDFENAVVGDAWNTPLEPVSDDHTLPWPCDLS ADVADKLRAAAEQVRAVESDEPNIAESTGTQGDVADESATPSPETGNSLLRLAKLLVADE HLMPEPDAADAGESQDAFDEAVRAKGERILAAGRQNVTSLQARAGSMGERDSRAYWRGLV RPIPHVASPAAQLGTRFHAWAERFIMADADVDGIGGTEGAAGMAAQSRAELIALIGDTQV DADNGGVQSQDAPSQDAQLRDERKLAAWQRRLVASPWAKRRPAWAERQLVVDMPQLGTIV NGKLDAVFFGGLDETDETKRYTVVDWKTGVKPRKPDEIKEKLAQLDLYRLLLAAMEGVPL DAIDACLYYVSEPHEADRELDALDKTEEEILAELSYGIPQQSDND >gi|148337424|gb|DS264436.1| GENE 21 29181 - 33257 3667 1358 aa, chain - ## HITS:1 COG:Rv3202c_1 KEGG:ns NR:ns ## COG: Rv3202c_1 COG0210 # Protein_GI_number: 15610338 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis H37Rv # 589 920 477 801 805 82 27.0 5e-15 MDVDDLDDVTLVAGAPRSGKTRFALDMLVAAMKRHGDAYAVMTVSGRQVADRLGDTVIRE LSAISQARPVTTLPAVAFRIMTAVRSHAGQPLPKLLNGAEQDVVIRRVLARHAEHAEHGD ECSTCALLRTYFVVADWSGMVVDDATDAFANQLRDMLARMNEIGAKPELEDALISRAADE HGTLDERRERLRVQWRLAFALRAEYNQAINEAYPDQYRLDASQLMIDAAAAVNEAETSDL PKLVIVDDFQDATLAGFDFLTALRNRGVRLLLVGNPDEAVQTFRGSYPEYLFNMAQSRLG ARLVRLEPSHMAEGTDLAAVASRVSLTIASTESTDDALANRPGKMPAIAIPETRDGSLEA AMYRSTVEELDDVVWKIKTEHLEHGRDWNDMAVIAHDNATVRTFGERLRADGVPVRYSSV TRPLKDEPFVQGLFSMIELAELKRQGIATSSMNLDTAGAYVRSRVASIMNSPLITTPGER PARLCVVESAMNALGSLATVLHDDTADPTTSDTSGRALLPQLIDDWNDYVETFHTARVAA SASDAENAADMGLPAIDTDDRLMTGERAAEDADEPSFGMNALYILLLEGDTDRVLDAIAS VLGRKDPQAQAFARLWKTLDDTLRSEARLTSHEPQYMLDCAWQAFGKAEIWQKTALRNNA EGRAANDRLDTAMRLFSYASGGESNGVTAAHTIDAFIEQVRALAIEADSLAHTAPIDQAV TLTTPAGAAGKHWKLVFMPAFQQGQWPNLAPRNTLFGGEELADIMLHGRLSDDIVTSAGR ENAQLAAVLASEQKSLLVALTRADERVTVSAVLNEDHVPSDFLYGYLPEWFDRDRDADAE TRVYTAVGEAGEYAGLEADPRGLVAASRSVLAHTPTDSPQARDAAQALALLASHGIAAAN PDNWAFLTEHAGADDMTEIDGKMESDGKTEHADKAKLIEQPESIEKTDGQSDVVTLSPSA VDSLWACPVCWMLENRFAGPRMGSAATSFGSLIHAVAQQATEAGLDLPQNHTAVSDEDNI DEITQWMISRYKTLRGDLNAIDDPEERYKALGKDAKASVALRNIATYFVKSNRTGYPSNN TETITVGTLDHAEAERQFAAQFDFDDILDAYNAIDGNAPISRDELIAIMGALVGGWPETG MSDRLTVRLSGRIDRLEHRRTADGREQVRLIDYKTGKVPNGRSLFSDLQLVCYQLGLAFP EHGGKRGAQAIAAMPDITQSALFHVMEYAAPAPRKGQGDEAYHQQALFAGGSINAGDFIP RKYVPKMASVFTSGLDDVERPAQVSEEHWKQLLESRSKMTVWSLTMISRVFYAAAASRAT RITARPTVEHVGYCRTYGSGVCPACQGEQNTVFERTVA >gi|148337424|gb|DS264436.1| GENE 22 33531 - 34952 1619 473 aa, chain + ## HITS:1 COG:Rv3080c_1 KEGG:ns NR:ns ## COG: Rv3080c_1 COG0515 # Protein_GI_number: 15610217 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 5 280 11 287 340 153 35.0 6e-37 MEASRSIPPQIPGYTLIKRLGSGSEADVYLYQQLSPARQVAIKISKNTLDPRAAVRFRSE ANFMGQISTHPYILSVYENGVTVNGRGYTVFEYAPGGNYKTSLEHGRLTADQMLTVGIDL ASALFTAHRKGIIHRDIKPSNILINAHNMPMLADFGIAGSVYGRPGVGFTIAWAAPEVLA QGGGGNESSDIYSLGATLFAMLIGQSPYEYFYADVLGDSQRQVRAERLKSVILNNPLPKL NRPDVPAEVERVLRKALSRTPEDRYYSALEFARDMQRVQQALYGRAVQTTVEGVPDYPQN MYAQTSAFDQSAPVAKQHARWAKPLAVTVAAAAAVVVMALAFVTVVMPNMDASSDNSKVQ VQNHGAQNHAEDDPDSAITSGSVPSVQDLTGEYTADGKVRFTWVNPSPKDGDSYAWSLVG DSGTDPNAQGTTTESTSIEIDPADGAQTCVQVSLVRADRQMSENPMIACAAKP >gi|148337424|gb|DS264436.1| GENE 23 35089 - 41157 6436 2022 aa, chain + ## HITS:1 COG:no KEGG:BAD_1311 NR:ns ## KEGG: BAD_1311 # Name: not_defined # Def: fibronectin type III domain-containing protein # Organism: B.adolescentis # Pathway: not_defined # 1 2022 20 2041 2041 3424 99.0 0 MSKHRNAENQSAQSYERQLRFGSMLRKLLPSGSRRWITPIVMLLLLLGIVAGAVIVSSVT QRHVQLDDGTVWVTSLKDRKAARFNVRNRDADAGVASTAARFDVAQHDGSTVISEGTKAS NIEASTVSESGNTTIKSDMRTVVGGNTAAFINVKTGNVWVGSADDVKSMNPTTDSPKMKL GSGGRIAVTHDGVVYGYRTSDGAVLSVDGPQGTPGKDATIKGATNVESFTVVGKTPVVAG AGKVFWPKGSADIGLQGQATLQAPSTDGRQTGWVAVSTPRGIAMVDLGSKKVTQLPNAGK GDAAQPVSTNGCVFAAWAQKANNYIRVCAANDKDAQFSSLEDVNPTSQLVFRTNHRLVVL NDVVNGNVWNPQESTKVIKIQWNKVETKQSKQQQQNNDSANNQHNFSKNCSAQSGQIKAV DDSFGVRVGSQQILDVLRNDEQTDCSVLRITSVSAPDGANITVSPVYDGRYLQLDASGAA AGNVSFSYEISDGRGQTSSATVSLTLAGGDDHAPLQSDTPPEIDVEQGASYTANALGSFS DPDGDPLTLVSASPQNTDQVTVSTRADGQLVFNAGSMSSGRAGIEVTVSDGQQTGIGMIY FSVKPANTLGAVIDPVVKQTTPDTRTTIALKPYVHGTSVEPAELTAVETPSGAATTMNAT DMSITFTASNPGTYYVPYTITQGSIPSTGLARVEVQAVAGDAAKPIAANDVALLGADNTA IVEPLANDVDPMGGVLSVTSVTADAQSGIKTGVVSNKRVYITARQVPTEPVRISYTVANA AGSSTGVIVLQPPALTTSNSVPKAENITTQVRTEGIVSVDVLDHVTYSDGTTVSLQNDLQ YDKNTFKGLVFVSGDTVRYQATRQTGSFPVTYTVKDNLGNAASATITINVHQKDASNKAA PTPSDVEAQVAAGQKVQIPITLTGIDADGDDVQLLGLGNKAPKLGRISEVGATYLVYEAY ADSSGTDTFSYAVEDWTGQRATAQVRVGVFKSGADSGVYARDDEITLRPNTAATVPVAQN DISGDNTDLTVAKDVESQGIDGIQVVDNMLSFTTPKQAGTYYVVYTVKDKAGLSDSATLT VNVDENAAIDPPTAYDYRVPAAATIDKKSVDVDVSQWIANPSGTADELQVGVDPSATDHA HVKGGKDSTIITVDLTDEARAVPYTVTNTTYGITSTAFIQVPAYGVFPPVLRPKAPALKV NARETITINIADYVRVGAGKTAYVDGADSVSATKAADGDLYVNDQTLRFTAPKDYAGPAS ITFTAVDGKRDKNDKVKIVNSAVLTLPITVIGREVPPPTFSSSTVDVVAGEKATTIDLTA LTHSASGLYEDEKQYSYSGGVNSGSVDARVSPSGTLTVSADKTATPDTTVSVPVSIKYAK GTVSAGMTVRVTASNRPLARVTEKTVKIKAGSSEQVNLLSDAYNPFPDTPLTVTGCTSDG ASKLTVDCPSNGVVSIRAASDIGANTNKVVVTVRDATKTKEREVTGTISVSVMDKPDAPL LSAVSGDPQDGAVNLSWTAGSANGSPITEYKVMWGGDASGERSCGQKTSCLIDGLKNGKT YSFKVQARNEVGWSKDSNAVEGTPDKLPDAPTDVTASVKGNTVSVTWKAPDGNFSSVNNY EVTLSGRNAPSKQTTNSTGIDFVFDNNAISDGDSYTATVRAHNKVNWSQPSKASDAVKPW GKPDAPKISVTNDDTTGTVTVESVGNTRNAGCKAVEISGDVSASIDGCSGSYDFKIPDHD LNTREYTIKAAVVGKEKTTSDDSTVRFTPKYAVKAPESVSVKGHDDVCVVSWKENGHADG FTVSADGLGSYHAGASERSHDFPLKEWQSCSSGSVTQHFNGAASTSKSGRADPAYVRKVK AAVKAPMLTWDANDPNIIKVSGGSVNMYGQPGKTVITFTADGKSYDVAWVLGSDKLNVKD VLPTGADYAWKAKVVGTDTALNNEDNGGTLLDHDRYKAPTPKPEPSEPSEPSKPSEPSDS DASTEGEAATRNDRPVASSIALSTVDGASKPWIRGLAYYARW >gi|148337424|gb|DS264436.1| GENE 24 41230 - 42597 1601 455 aa, chain + ## HITS:1 COG:PAB0848 KEGG:ns NR:ns ## COG: PAB0848 COG0714 # Protein_GI_number: 14521486 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pyrococcus abyssi # 146 449 6 311 314 296 50.0 5e-80 MSNDFDDATQLGSIGHNPSVPSQPGQQQPAFHTPNLPEQPQADEDPEGTLLSAHGTTQPA LPQQSAPATPNQPRFRQPMPQNLRQPAANPAVAMPAQQPVQPTQPVQPSQPVQPSQPVQP VKQSQPVVDTSMMTAPSKDITEFHEKFAKLVDNVSQVVVGKEAPIRQCATAMVVGGHILL EDNPGTGKTQLARGLANSIDMSFKRIQFTPDLLPSDVVGVTYYDQKRGEFEYREGPIFAS IVLADEINRASPKTQSALLEVMEEQKVTVDGVTHPVPQPFMVIATQNPIEQLGTYKLPEA QMDRFLIKTTIGYPSHDVSVNILKQVNVTDRAATVHPVLTGEDVLRMRNISETVHLDDAI LEYIVRLVEATRHNERIQVGSSMRGALALTRCARVWAASDNRGYVVPDDVKNLAVPVLAH RITLTAEATFAGNTPEQMIGQILEDVPAPTLGANA >gi|148337424|gb|DS264436.1| GENE 25 42647 - 43867 1228 406 aa, chain + ## HITS:1 COG:no KEGG:BAD_1313 NR:ns ## KEGG: BAD_1313 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 406 1 406 406 796 99.0 0 MRHSHTVQRRRTIQRSLRRLKHRIKRLATSYVSPLGWAVAALAVASLVAFVLLGWHELLA MAVVFAVMLAAAVMLSLGNTSFQATIDVSSRRVTVSDTVKVDVCVDNPGRTPTTSARGDL PIGDNHERFAIPMLAAGQSRQTTVEFTAVSRAVLPIGPLSIRKGDPFGLIRHEKKLVDQI NVFIHPQTVLLNALNAGIPRDLEGQPSGEIVDDDLDFYGLREYEPGDDVRNVHWLSSAKT GSLMIRQYEATRRTDTALTISVNPDDYIDSQEFELAVSVHASIGVQCLQQNRPVTAHAGS THAIPRNATEFLDGCSGIDPDIDDNPNLAQTTLEHAPDASFYFFTVGRLKTIDDIKHMVL ALPRSATCVVLQAATGQPRAIKRYSDFTLATVGDLNDLPMIMGVLA >gi|148337424|gb|DS264436.1| GENE 26 43864 - 46335 2287 823 aa, chain + ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 343 659 271 591 721 84 23.0 7e-16 MSTTFTNTGNFTGNLTGTGTNSANTNTGMATGTGTGSWADSTHSVIWMSRSGKSPAMPNT NQPHAAQYASLTVAALLTIAAASNLIDVYGSALSWTSAAIPATIIGSLVALAGLVPALRL WWQMLFMACAQLVVGPVIFLNGTTIAHVIPTLRTLTQGWMRMLGSFKYLLAIDPPTGTGD GSLLAVWTICLWAALLAGIFAVAEDGRLTMVAVVPVVANLAICALLGTSSGFYRMAIGTI MAVVLVVWVSARWKLLELGRWLSSVVIVLLASAVAIGGCLVVGQNRTILRDHYDPPLSPY DYTSPLSGMRSYIKNHKDDVLLTVNDLPAGSTVRLAVMDRFDGNVWNLSDSTMASDSSNY HRVGDSITNNATGKRFTAKFTVDDGLSDYWLPMAGAASSVKFATSSDADSFYYNTDTMSA IYPSRTSPGLSYTETGVIPRTPTDKEIAKANASSISQPKAEDVPDCVDKLATAIAGGQSK GGEAAQSLADKLRESGWFSHGLNGDYPSRAGHGNYRIDQLLAGSAMVGDSEQYASAMALM ARSLGLPSRVVLGFLPKNDEGEISDSRTEKHGKTTTTKFTGNDVTAWVEIKLDGYGWVAF YPTPKETKVPDENQNLTPPNPQTLVRQPPVPLTDPLRDDNQAKGKTSLGGSMADETPTSL FWQRFGRIVRKVAIYGSPLWTVLIVCGLLLAIKAIALARARRHGSASQRVAAGWQAVAAL ARQSGLDVQGTRNEQAQAIAEQMGFDANTLLELGREADYAAFSGGDVTQEHAERYWHDIA EERKFMLGSLPTFRRWRAKLSLADVFHFRKIRLRKIGVKGRDS >gi|148337424|gb|DS264436.1| GENE 27 46332 - 47192 926 286 aa, chain + ## HITS:1 COG:PA0075 KEGG:ns NR:ns ## COG: PA0075 COG0631 # Protein_GI_number: 15595273 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Pseudomonas aeruginosa # 12 248 15 239 242 82 31.0 1e-15 MNVKHIEVGLNSNIGLRRKDNQDSACAGNGVYVVCDGMGGGKGGKQASSDVAERFARLAE LPTRDLDAIDETLILAQQEVLRLGEQLGGVAGTTISGVLLPTRVGDDAICSDERCYIVNV GDSRTYHMRADGNGAWLADSLTCITRDHSERQNAIDSGQMLPDEASRCIPRNIITQCVGA PAGIQPDWYAARADGRFIICSDGLHAQIGREQLAEIAAAYADPQMAADMLVHAALNAGGR DNITVIVVDMRSDMPCDEDWNVSKIGDDEDIDDALDGTLQTLRVIQ >gi|148337424|gb|DS264436.1| GENE 28 47226 - 47960 822 244 aa, chain + ## HITS:1 COG:no KEGG:BAD_1316 NR:ns ## KEGG: BAD_1316 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 244 2 246 246 330 94.0 3e-89 MVDFDAAVAAVQDPNADPVFLAKIAYENPEFGANVVANPRAYPGLKRWVAEFGDERARQQ LVAMGWPVPQNGVQPQPIAEPTAQPMAEPVAEQVQPEQQYQPAVAEQFQQQQYQPEQPVN QQYGQDAAYAASNEASTEYVDPYINPADLSEVADYSSSQPQNEPEQQYAEQQYAAAQESP ADAGFTAELAMTTTDQMLMARIASEAPELRPCLARNPYIYPELLAWLGQLNDSAINAAIR LRQQ >gi|148337424|gb|DS264436.1| GENE 29 48122 - 48790 630 222 aa, chain - ## HITS:1 COG:no KEGG:BAD_1317 NR:ns ## KEGG: BAD_1317 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 222 1 222 222 396 98.0 1e-109 MEYASIVLQNEYRQTAWTPPSYNGNMSFLPYPPPPEPGWYDDDVTVMAQPTAEPVGNAAD SLETRERLAAQNESDDHDMQDVSVAKGDAAVSDEDDIDWDGTVLSEAFTMKQPKHTYVLD NEQTGQQVIVDMGVLLGRKPSAEVPAGAKSVKLEDPTRTISRNHAAISFDQDGTLWIEDY GSLNGTYIIQDDVETKVEHKPMQLEAPCTVRIGDQFFQFRKQ >gi|148337424|gb|DS264436.1| GENE 30 48836 - 48955 60 39 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFPSVFTDSTFKKREKAKKDFSHGEHSSVWSTAEWATAV >gi|148337424|gb|DS264436.1| GENE 31 48903 - 49859 968 318 aa, chain + ## HITS:1 COG:no KEGG:BDP_1780 NR:ns ## KEGG: BDP_1780 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 25 315 62 364 370 103 28.0 8e-21 MANTPPYGQPQNGQPQYNQPPQPQAPNYSQPQPGGPQYGQPQPPMPGNFPSQQAGAAAKN KPPVAIIIGAVAAVVVIALAAVFFLTNRVSRSDYEEALVQTQALESSYTAINEEFSSAAS ATDNDSSSAYDEGKKKLKTFKQDSDKLAAMKAVKKDKDVKEKYETFERDRVKYERYMNDL AQTMPALMKMTHTCTKLPKFDSADMSSYYRDLSKALESCAADAGDLAKVPVKSYAEYGAD MQESVSKKKDIVDQMADLNLNDIEYGSADYEKLQDLHSKMSDIDSPTLDQSDLQKAAKEV DLSGSLKDLETTLSEKIK >gi|148337424|gb|DS264436.1| GENE 32 50018 - 54031 5499 1337 aa, chain - ## HITS:1 COG:Rv0668 KEGG:ns NR:ns ## COG: Rv0668 COG0086 # Protein_GI_number: 15607808 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium tuberculosis H37Rv # 1 1280 1 1283 1316 1583 62.0 0 MLDVNEFDKLRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC ACGKYKRVRFKGIVCERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI APKDLEKVIYFAAYMVTKVDEEQRHQDLPDLQQEFDNEIANLEKRRNAEIEERAKKVEAD LAELEAEGEAKGSARAKLRNSAEREMAAIRTRYDEQIQRLSAVFDRFKTLKPGDMEGDVD LWREMEDRYGDYFEGCMGAEAIKKRLQDFDLEAASKQLREEIDTGTGQRKARALKRLKVV NAFLTTGNKPEAMVLDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE LGAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDQGFAQNMKSAKRLVDRA DSEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD QMAVHLPLSAEAQAEARSLMMASDNILKPADGHTVTMPSQDMILGLYYLTTVIDGAKGQG RVFSSLEEAEMALDKHEIDMQAKVLIRLPQDFVLPKDWEPGEVKVVDPEPGSPDVVKEER FHDGSVLFATSYGRILFNGTLPVDYPFVNEQAPKKRLSKIVDDIATRYSTAQVAVTLDAL KDLGFTRAPWSGVSFAFSDVIQPPELDEYIEKYEGEADKVNENYEIGMLTEEERRQELVD LWTKCTSEVSEAVEEHFDSKNNLAIIVQSGARGNMMQINQIAGMRGLVANPKGEIIPRPV KSNYRKGLSVLEYFISQHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKRG LTMKVGERDAEGNLHLVKAADGGPYSRLLAADVIDPADGETVLYKAGDALSMDVLNDLVA HGVEEVKARSVLTCESKRGVCAKCYGWSLATNKLVDVGEAVGIVAAQSIGEPGTQLTLRS FHSGGVASASDITQGLPRVTELFEARTPKGEAPIAEFAGVVKVEDTERGRQVTLKPDDDS VEPIVYPVTRRAPMLVKDGDHVEAGTQLIEGSVDPKKILRILGPRAAQVNIVEEVHTVYR SQGVDIHDKHIEVIVHQMLRRITVIDSGDTDLLPGELVDKARFKAANMEAVKNGGKPAAG RPELMGITKASLATDSWLSAASFQETTRVLTEAALNQKVDDLKGLKENVIIGKLIPAGTG LARYRNATVEPDKAIRDTIYPNFGLGGEGTDSSFGDTDLSDVDFSNIDFGDLKLGDDFNP DDFLDDNGGQTDLGDTL >gi|148337424|gb|DS264436.1| GENE 33 54126 - 57686 850 1186 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 681 1142 902 1390 1392 332 41 7e-90 MAEATTNTTTIIARADQHDIDLHKASDRVNFGSIREPIDVPYLLGVQTDSFDWLIGNERW QKRVQEDLENGTNTVPHTSGLDEVFQEISPIENFAQTMSLTFSDPYFEEPRHTVQECKEK DYTYSAPLYVNAEFENGDTGEIKSQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPGV YFDRSQDRTSDKEVFGAKIIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGMTK DEIADAFKDYPLVMDALAKETVQTQDEALTDLYRKIRPADTPTPEAGKNLLDSFYFNTKR YDLARVGRYKINRKLGLEKDVNDRSLSREDIIATIKYLVTLHAGETKFPGKRDGQDVDLR VDVDDIDHFGNRRIRQVGELIQNQLRTGLSRMERVVRERMTTQDPEAITPQSLINIRPVN ATIKEFFGTSQLSQFMDQNNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHPSHFGRMC PIESPEGPNIGLIGSLATFGRINPFGFIETPYRKVVNGHVTDEVEYMTADRDAEHVIAQA NQELDENGNFVKKQALARVGEEEAVDVPVSSVDYMDVSPRQMVSVGASLIPFLEHDEGHR ALMGTNMQRQAVPLIESERPLVGTGAEWRAAVDSGDVILAEKPGVVTYVSADIIRTMNDD GTTSSYKLAKFQRSNQTTCYNQVPLIHDGERVEAGTVLADGPATQKGEMALGKNLLIAFM PWNGYNYEDAVIISQRLVQDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVANL DERGIIRIGAEVEAGDILVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGET GTVIAVKEITREDAEEDGDELPNGVNQMIRVYIAQHRKITQGDKLSGRHGNKGVISRILP EEDMPFLADGTPVDIMLNPLGVPSRMNLGQVLELHLGWIAHAGWDISLDPDAEAAWKKYV PQGAEKGAPGTPVATPVFDGVRPETIKGLLSCTLPDRDGNKLVGPDGKATLFDGRTGEPF PKPISVGYMYMLKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAY GAAYTLHEMMTTKSDDVDGRVRVYGAIVKGENLPPAGIPESFKVLLKEMQSLSLNVEVLN AEGVAIDMKDEDDDPSTSSDDLGFNIGARPDAAAKEDQVAEEPEFQ >gi|148337424|gb|DS264436.1| GENE 34 57849 - 58493 627 214 aa, chain - ## HITS:1 COG:no KEGG:BAD_1320 NR:ns ## KEGG: BAD_1320 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 214 1 214 214 408 99.0 1e-113 MAYKTSPRTGKKRTKQQQAMYRRRRIVFGIATVLVLSFIVFCLYSLTQGVVAVNREIHHA DVYAISRKEVPSPTQQQKSSVPDCDASNVALSLTPAASSFGVGGTMDFTASVKYNGSGKA GCLIDVSQAGMVLTIKSGKDVVWKSNVCPVDTDYRLIAKGDEVKQTIAWPGVRSGSECAD AADLPNVDRGVYSAQLSVEGHAKTKSEPVGITVE >gi|148337424|gb|DS264436.1| GENE 35 58562 - 59566 886 334 aa, chain - ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 39 333 8 292 293 238 43.0 2e-62 MNDTNTAYDTAVRDADFDDFADSATAVTSDASDADEIATTLAQWWQTNARALPWRFGRTT PWGVLVSEVMSQQTQMGRVVPYWTAWMDRWPDAAALADAPKSDVITAWGRLGYPRRALRL QECAHVIAYDYADELPHTYDELLALPGIGDYTASAVLSFAFGERIAVVDTNIRRVLSRAF VGVESLGGSASPAERALAKRLLPDDDSAKCRRFDRPSVVWNQAVMELGATVCTAKSPLCE ACPIAGKCAFLRNGRPGLGQRRTRPRQRFQGTDRQVRGLVLNALRGLPDGETVLDRKSVE RLWKDHVQLDKCIASLDEDGLIEILPGGGVRLPV >gi|148337424|gb|DS264436.1| GENE 36 59587 - 60270 876 227 aa, chain + ## HITS:1 COG:MT3475 KEGG:ns NR:ns ## COG: MT3475 COG0219 # Protein_GI_number: 15842962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Mycobacterium tuberculosis CDC1551 # 75 226 4 153 154 168 53.0 9e-42 MTNEEHTDNAQGATRDAETQAAEAKVEKMFEYGYRKSNYGPDELVTDAHGNPISVVDAML SAKDAAKAETSTPHLCYYSPRIPGNTGSAIRLCAVTGTILHLVEPLGFNLRDTKLRRAGL DYHDMAHVVLHPNFEDLVESMPDSRIIAFTAHATKLYTDIEYKPTDILLFGPEPGNIPDP MDIMAGPHVAEQVRLPMRPSLRSLNLTNCASIAIYEAWRQLNFAGGK >gi|148337424|gb|DS264436.1| GENE 37 60339 - 61703 1992 454 aa, chain - ## HITS:1 COG:CAC0479 KEGG:ns NR:ns ## COG: CAC0479 COG2848 # Protein_GI_number: 15893770 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 454 1 451 451 566 65.0 1e-161 MLNIMEVHETNKMIEQEKLDVRTITMGISLLDCAADSVDEVCENIYNKITTYAKDLVSTG QAIERDFGIPIVNKRITVTPISLVGASSCKSSEDFVKIAHALDRAAKKVGVDLIGGYSAL VSKSMTPAEEMLIRSLPQALSETDIVCSSVNVGSTKTGIDMNSVELLGHIVKDIAHATAD NDSYGCVKFVAFCNAPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDEAKGKDFEF LCETIKRTAFKITRVGQLVAQEASRRLGVPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAANNGCLKIEKLEAM TCVCSVGLDMIAIPGDTTAATISGIIADEAAIGMVNQKTTAVRVIPVEGKGVGEMANFGG LMGYAPIIPVNQTSCEAFVTRGGRIPAPIHSFKN >gi|148337424|gb|DS264436.1| GENE 38 61770 - 62042 449 90 aa, chain - ## HITS:1 COG:MJ1558 KEGG:ns NR:ns ## COG: MJ1558 COG3830 # Protein_GI_number: 15669753 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanococcus jannaschii # 1 90 1 90 90 84 46.0 6e-17 MNKAIITVVGQDTVGIIARVCTYLSAHQVNVLDISQTIIDGFFNMMMIVDYSNADEEFGT VVDDLDKLGEEIGVRIRCQREEIFTKMHRV >gi|148337424|gb|DS264436.1| GENE 39 62283 - 63533 1709 416 aa, chain - ## HITS:1 COG:BS_galK KEGG:ns NR:ns ## COG: BS_galK COG0153 # Protein_GI_number: 16080871 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Bacillus subtilis # 22 396 8 368 390 185 33.0 1e-46 MTAVEFIEPLSHDEGVKNATDLFRATYGEEPAGVWAAPGRVNLIGEHTDYNAGLCLPIAL PHRTFIALKPREDTKVHVVSDVDSGNVTEADLDGLQAGGVEGWAAYPVGVAWALREAGFD AVQGFDAAFSSCVPLGSGLSSSAAMTCSTALALDDVYGLGYGASDAGRVTLINAAIKSEN DMAGASTGGLDQNASMRCTFGHALRLDCRPELSPLENVSQQEFDLDKYGLELLVLDTQAP HQLNDGQYAQRRATCEKAAEILGVANLRVVADSIAKSDDPFQALKETLDKLEDDTMKKRV RHVITEIARVNSFVRAFANGKIDEAGRLFNASHDSLAADYEVTVPELDIAVDVARVNGAY GARMTGGGFGGSIIALVNKGQGHEIAQKIADRFEQEGFNAPRALPAYAAAAASREI >gi|148337424|gb|DS264436.1| GENE 40 63565 - 64815 1703 416 aa, chain - ## HITS:1 COG:TM1191 KEGG:ns NR:ns ## COG: TM1191 COG1085 # Protein_GI_number: 15643947 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Thermotoga maritima # 75 408 3 313 318 160 29.0 6e-39 MGDFVNYTPGEYAKEHIRITPTTLADGRDFFYLDDDPEYVSGVKTRELKDPRQLPYRFSN QLNAAGEEVPYAAPEMRRDPLTGDWIPMATARMNRPITAGPGATAKGNPLAARKPGDPYQ DGEVPDTDYNVVVFENRFPSMVRVPGRSGDVEYVNGNPLWEKKLAAGRCEVICFDPDEDG LPADLPVSRLRTVVEAWAFRTAEISKMEGIEQIFPFENHGQEIGVSLAHPHGQVYCYPFI APKMEAELKQTEAYHEKIGGNLLKDLMNAEIEAGERIVMRNHSWVAYVPAAARWPLEVHV APVRDVLTLDELNDQERWDLAVMYSTLLKRGNAFFDKGDGKGMDLPYIAAWHQAPIHDKR RENYRLNLQFFSFRRAANKIKYLAGSESGMAAWVSDTTPELIAKRFHELGPIDIEG >gi|148337424|gb|DS264436.1| GENE 41 64820 - 65641 900 273 aa, chain - ## HITS:1 COG:BS_yulB KEGG:ns NR:ns ## COG: BS_yulB COG1349 # Protein_GI_number: 16080173 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Bacillus subtilis # 7 255 1 244 258 131 34.0 2e-30 MCDNVHMISSQRQHLILSRLRTRGAVRITALSKELGVSAMTIRRDIADLADKGLLKRVHG GAVSTSTLLSEPLFSVKSQMDIGLKDAIAQEAVKYVAPGDVIAIGGGTTAYVFAQHLLES QQSSGITILTNSIPVAELVQALESKDVEVIVTGGVTTRSNSLVGPIADKVVASLRVNTVF LGTHSVSIPRGFLMPNSLEAATDMAMMDIADRTIILTDHTKWSCTSLSLFARFDQVDTVI TDDGLDPDSVSKTRDLVKELVLARQAEPVQEGE >gi|148337424|gb|DS264436.1| GENE 42 65826 - 66974 1326 382 aa, chain + ## HITS:1 COG:slr1418 KEGG:ns NR:ns ## COG: slr1418 COG0167 # Protein_GI_number: 16332087 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Synechocystis # 39 381 20 374 381 189 31.0 1e-47 MTYVSENFWHDAVNKATTDLFTFGYKHIIKPHFIFNQTPDVAHSQMIDFCKVTRNIPPLM WLCREMLDYTDPILETNVMGVDFANPFGLSAGLDKDCEMPVLLDNVGFGFETVGSTTSRP CPGNPRPWFHRLPEYDSMMVHVGLANEGSAVVIPRAENAWTKAKSMQVSVSIARTNDSKT GDLDEGIEDYCISMRRAAGRTAMVEVNISCPNTMAGEPFNQSPEALDKLFTELDKIDRPQ PTLVKMPLNKTWPEFKDLLDVLAEHNVQGLSIANLQKDRTGMSIPRDWEGGLSGSPCYAT SNERIKQVYREYGDRFAIAGIGGVFTPQQAYEKIRCGSSLVMFISALMYRGPQQITVLKR GLAELLRRDGFEHVSEAVGIDA >gi|148337424|gb|DS264436.1| GENE 43 67227 - 68348 1220 373 aa, chain - ## HITS:1 COG:all0827 KEGG:ns NR:ns ## COG: all0827 COG1902 # Protein_GI_number: 17228322 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Nostoc sp. PCC 7120 # 17 354 5 340 355 325 50.0 1e-88 MSEDKKNGKQNKTVKPFDPMTLRGVTVRNRIWLPPMDTYSALAQDGKPTPFHYQHYVSRA MGGFGMIIMEATAVAPEGRISPCDLGLWDDGQMDAWRWIVADAKAAGATMAVQLNHAGRK GSTGCHAIGFDGQSVPEEQGGWRTVCPSANAYGSLARPRALSVDEIHTIVDQFRDAAWRA MNIGFDAVEVHAAHGYLLSQFLDPLINERDDEYGGSFDNRVRMLVEVVDAIRSVVPDTMP VLVRVSATDWAAGGWDLDQTVELAKILKAHGVDLIDVSTGGLIPDVTIPVKPDYQVPFAE QVRSRAGIPTTAVGLITKPKQAKKILKSGAADAVEIGRAALRDPYWPLRAAHKLDVPVEE APYQPPYLRGAFR >gi|148337424|gb|DS264436.1| GENE 44 68574 - 70874 2593 766 aa, chain - ## HITS:1 COG:Cgl0279 KEGG:ns NR:ns ## COG: Cgl0279 COG0744 # Protein_GI_number: 19551529 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Corynebacterium glutamicum # 83 651 70 625 795 201 32.0 5e-51 MGVMPKKKTLTVQRVLALVIAYITLCVGGGVVTSIFFMPAVFAANNAAKAVIPSLAVEGI DFDVTSLPQRSTMYFNDGKTAFAEFYTQNREVVPLKKISKAMQQAVVAREDKRFFEHTGV DVQGVFRAFFQTYVRGGDQQGGSTLTQQYVKNVLSTQAREDDDPIAEYHATEDTVARKLR EMLISVQIEKKYSKAEILQGYLNIAQFGRNNLCGVEMAAKRYFNVSASELNVTQAATIAA ITKNPQNFDPSVEANQKEAEHQRNIVLQLMHDQGYITSEKEFKDAINTPLKDTLNLQDVS SGCQSAIENTGFFCSYVVNQILKNKAFGKDDEAREKLLKEGGLKIVTTLDRNANNAAMQA ANSTVPATDPSGFEVMIAAVKPGTGEILSFGINRTYDATDDARTDETKTSMNYMVDQEDG GGMGFNVGSTWKPINMVAWMQKGHSINESLVTSTVYDTSKFNCNGYGFVGPWRVQNSGGG TTSPESPLQGLIKSHNTTQASMASNIGLCAIADAAKEMGYHNAISNASDIYSANSFQPPM TIGTVQASPLTMANVYATMGANGVECTPIAITKVTDRSGSKVKVPSANCHQAIDPDIAQT VSYALNQGVVQPGGEASTTQLDNNRKTFAKTGTNENTVMTTAGFVPNQVAAFVAVADAQD PINNTFDNKTINGVYRPSWYGMYIATPAWKQFMNTYLAAINAPIDNDYGKGADKYTVSKG ATRTYNQYQYQRQQNSQQQSQQQTNQGQQQQSQQQPAEQQNGQQHQ >gi|148337424|gb|DS264436.1| GENE 45 70999 - 71739 745 246 aa, chain - ## HITS:1 COG:Cgl0291 KEGG:ns NR:ns ## COG: Cgl0291 COG0664 # Protein_GI_number: 19551541 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Corynebacterium glutamicum # 20 245 5 227 227 181 45.0 8e-46 MVTPNGTNGINGFGGFDDERETLLHTALFKQVSSEEARELLPYLQHAEYDKGDFIFREGD TDHRMYLLEEGRVKLTRQSSDKRVQLLSIHAYGEVLGEIPVFDPHGGPRTASAVAMTNGT RVVWLEHDALFDWLDEHPRVAVDMLQVLAHRMRSNNERICDLVFMDVPGRLAKTLLNLAS RFGEPVEAGLKVPHDLTQEEMAQLVGSSRETVNKALMDFANRGWIAREGRSIIIYQPGML IRRSRR >gi|148337424|gb|DS264436.1| GENE 46 71831 - 72916 847 361 aa, chain - ## HITS:1 COG:Cgl1050 KEGG:ns NR:ns ## COG: Cgl1050 COG0095 # Protein_GI_number: 19552300 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Corynebacterium glutamicum # 135 352 105 311 352 193 44.0 4e-49 MECALEQCAARCLSGSMVSERDVTAAVERTMLHHPDVRIVGMGARGIAIAFQRAIDGIDG ADGIAGIGGNDVTKVEPRDDLRIRRHTSPMETAETAEIAKNIENAGTAESDENAGTVGTG EIAETGNWAEYARRWHALKPNIVHDDPRKPQEQMDLDVEWAREVAAGTREPTLRFWEWAE PAVVIGRFQSLEDEVNVHTAQDEGFHIVRRCTGGGAMFIEPGNTITYSLYAPLDFAHGMS VEESYELCDYWLVEALRALGLNVRFAGLNDIATQYGKLGGAAQRRFAPTHGGPGAILHHV TLAYDIDAEKMTRVLNISREKMSDKAVKSAAKHVDPMRSQTGMGRDEVVARLVDAAVRVT M >gi|148337424|gb|DS264436.1| GENE 47 73168 - 74037 1045 289 aa, chain - ## HITS:1 COG:PA0825 KEGG:ns NR:ns ## COG: PA0825 COG2314 # Protein_GI_number: 15596022 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pseudomonas aeruginosa # 208 283 16 93 111 65 46.0 1e-10 MSDNNADFNGTGQVNNPTSDNAAQADYNQPYIPQQNDAQMNHPESQPETPAYDQNSAAYT QPAQPAEPAVPAYDPNASAYSQYGQAAQPSYGQPATPAPAYGTAPVYTQPAQPATPAAPV YDPNAASYNQYGQYGQPSQPAQSAQPSYGQPAAPAYDPNNAYAQPDYNQANYGQQGYAAP SYNQSAYTQPAYAQQPAYGQPVAPAGYAQKSKLAAGLLGIFLGCFGVHNFYLGNTGKAVA QLLLTVIGWILIIGPAVAGIWGLVEGILILCSHYGSQWHRDAQGVELQD >gi|148337424|gb|DS264436.1| GENE 48 74245 - 75285 1538 346 aa, chain - ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 10 343 3 335 340 396 63.0 1e-110 MSDSAKKYTIAVIPGDGIGKEVTPWAQKALEKAAEGVAEFDYEHFDLGAERYLRDGAILP EEEEERIKKTDAILLGAVGDPRIKAGILERGLLLKLRFDLDQYVNLRPSKLYKGVTSPLA NPGDIDFVVVREGTEGLYCGAGGAVRRGTPNEVATEVSINTAYGVERVVRYAFQLAMKRR KHVTLVHKKNVLVNAGDMWQRIVNKVAEEYPEVTHDYLHIDATTIFMVSNPSRFDVILTD NLFGDIITDEAGAVVGGVGYSASGCINASNEYPSMFEPIHGSAPDIAGQNKANPTAAILS AAMLLEHLGFDDAAKKIHVAVEADIEELGSTTRSTDEVGRDILARM >gi|148337424|gb|DS264436.1| GENE 49 75497 - 79876 3725 1459 aa, chain - ## HITS:1 COG:lin0372 KEGG:ns NR:ns ## COG: lin0372 COG4886 # Protein_GI_number: 16799449 # Func_class: S Function unknown # Function: Leucine-rich repeat (LRR) protein # Organism: Listeria innocua # 947 1155 387 595 656 113 36.0 3e-24 MDYRMARHAAARHTGMRSVRRIAAAALGLALSLAGLSAQSVAFGNDDPTNPAATDVTMIA FQQSWKTIGDECTKTYGPEGVKYVQVSPPQESIQGTQWWTVYQPVSYKLDSRFGTEDEFK TMISQCDAAGVQIVADMVLNHTTGHDVSWVDDQYGVAGTEYNGSYGRYPGIGIYQYEESG NNHQYGLPSGDFHTCKSNVSDNISDYTNADEVWNCRLSTMWDINTGSDRVQNIQAEYLAH LWEDGVRGFRIDSAKHMDPNDIASIKRKFMTKAGITDEQSFPWSQEVIYHNGESEKFAPE RYEKNGQVTEFSYAYSLLKDFNGSITNLKNITSDLLDDADNATVFVSNWDTARGSETLKP VSGARYELANAFMLGYDYGHPKILSDYAFNESTQYDDGVKDSTDTTVPKISMDDVCSTQK DPTQMEYGDWNCQQRWTSIRGMIKFHNAVNGTSVSNWQESGSNDIAFERVDANGKSKGLL ALNNTLQEHDVDYTTSLPDGEYCNVYASRTCSQTVTVSGGHAKATIGKRSAIAIYAGAVK GAWTETTEPSGTYAPQYKDSPNSSLIGDKTLTIYYKPDESWDGQVYVRYTSDNGSGSIAM SAVDVADSTNAAGWYKADLPEGANLSAVKYHFASTQSGESDSTDWNGGKRGTEYTAQVGA TMINVSGHRQQTGVPYTRNHAAKTKVTVNFRSVSGVGENASGVKVWNGDDMESATYIPFE STPTQYGRKASGELDGDLATVHFRIVDGADATGASAGTVEQYEASVWKLAKFGDAHVSGA IEAWVDGAQPDTASDRSSEKASPSATPQPNDIKNPKNLTIKLHYYRPDGNYQEYSMESDA WKGWDLWSWYAESTSGESQEFTSHDEFGEVAEYTLSQTAKGVRNPWFIIRNGGSSWTGKD CDDNDREIPESVISMTAGNVENGVAEFWIVSGDPTVYTHPVNVAGITFDTQGGSSVPAQA VAIGGTASVPETPTRDGYVFSKWTTDVAGEHEYDFATTVSAPITLYAQWTEAKTVTFDVQ GGSEIAAQQVQTGKSAVRPENPERVGYAFAGWYTSADTSGSEYDFTAAVNDDVTLYAKWT PNMYAVTFDSQGGSAVDAQQVAYGGYATQPATPTRDGYTFVGWTTDAAGTTPYGFGMPVT GGITLYAKWDDAGATYHTVTIHLNDGDDYSSDLPQDMTLFVKEGEKLTIPDSAPSRGGYR FAGLTSDEQRKTDYDAGTAVTADMTLYAKWVKTWTVTFDTAGGSAVNSQTVDDGGVAVAP DPSPTRDDCRFTGWQYDGKSYDFGSKVTGDITLTAQWVRTAHQWTITFDLNGGHAPAGKD AKTLYAERKVYDGDSLVSPTADIANEPQLDGYTFEGWSTVKDDALAVSVVSFDSSGKSLM PIDRDGTLYALWSRENRVVKPESSGSTGSSTSYSGAYSDSYTGLNGLAAFDAIVRQSGKF SGTNFGSVAEDYVKPKSVR >gi|148337424|gb|DS264436.1| GENE 50 79906 - 86682 7932 2258 aa, chain - ## HITS:1 COG:lin2282 KEGG:ns NR:ns ## COG: lin2282 COG4932 # Protein_GI_number: 16801346 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted outer membrane protein # Organism: Listeria innocua # 1068 1668 1016 1555 1806 75 26.0 1e-12 MLVTLATMLACVLIGPVHAYAEEYNISDLGWVDKDDTSFEISSDGGKTWKPYISGMQVNY GDQIRTELHWKVPNDVKINEGDTFVYDLPSNLEYKSNEKYPIYNGGDVVGYYTIDGDKMV ATYTRGESAGSNIEAFVTTDGTITSNKTGGSAGGDTSFTFPGYGTITVNVEGKHSVNVVK RPAISTSDASTYDFVLEVTSTGTNTGVTMDDTMGGLLTFVDGSVHIYTDADCKNEYTGAW QSSKTDDHNFNVTIGSMGDGEKLYVRYSVNADKDSVIKACREAGNCSNVTENKNKVTYSS NEDVNKKETSNSIWFNYSDWYVNKSATAAKDENGTQGFTWNITIGAGEGQSVDGATVKDL LDSNNLREPTGDLVLSCYNSGDWKSACPTGVDGAYQGGDQYNPQHYIKLRWDDLANGRVT LPSGGYDRFQIQYWTEAKNVPVEGSGEHQKYKNEVTVKPQDGTGKTATAEPQLGTDAVEL KKTCTSPASEAKNLTWVTSMKALEDLTNAELTDKLDVDDSGKDLGSKQTLVKDSIKVYTD AGLTQLYTGNYKVNATDRGFTIVFASMAKGGEVYVQYQSKVNDGVTDETVWNRASALNKT STAKHQHRGDVLGKDSANQYWDEYGYGYTANSKGVIRWRIKVHDVVSNAESIIVTDALPA HTRYVAKSLKIFDASITTKMLSGVSAKDNGDGTVTFTIAKGTPAFSQAKTSAGVLIVYET SIDPITAPDWGNYENKAHIDIDGSAGGDASATVGASKPKLLDKNGKYDATTAPNVNYTVK VNPNADTLNKGNNLTLTDTMGQALDLNANSVSIMDSDNGTAINGATWSYNPQTRELVFSI PDARACTITYTAAVQLKPGESFGSLGGNKIVLAGYENNGGTSQNTITGTVQQSKGGMKYD QSTLQIYKYADGDLGKPAGSATFKVESVTGCNFVSSTADADGTCNGTLGKEITKQLTTGA SNGLSDRLQLDYDTVYKVTELTGPDGKVPGSTDSQYEKSAPLYVIFPGHDAQTAAGAYDG RYDNKTVTVDGQSGKLIVAVAKDSDGKTTTLGNYRWNCSNDHKTKFKVQFTKVDAANAGV PVDGATMQLTRVGSSQVESDWTWTTSGSETKTLELLPGRYKLTEANAPDGYQVMDPIIIL VGEDGTITVDGKNVTGSDGIGHVQAEDAPKTTSLTVTKTWNDNNNQDGKRASVTFDLYRK TDGDADYTKVDGQSRILNPDKNDNVQWTGLPVKVDGKTAAYMAVETTTLGGYDSQCADVQ YNTDGSAATEQCTNTHTPETTSIGVEKAWDDADNQDQKRPDSVTVHLLKNGEETDQSVTL DAVGNWRNDSAFTNLPVYEDGKKIVYTIREDTVSGYTTHITGSQTQGFAITNTHHPENEE VWFSKQDLKGTEIAGATMRLTGTLNDGTEFKTQTWVSERDKSKSIKLKPGTYTLTETKAP DGYLVADPVEFKVVSDAVTGKLSVQIKQTDGTYADVQDNTIVMTDQYRTHQVTVNKNSLT SGITNIDGAQMSITGTTLDGKAIDEITWTSKGGEPGELTLLPGTYTLREKVAPDGYETAD DIVFSVGLDGSVTIDGKKQDSNTVVMKDKPGKSGILFSKTKVGGGAELAGAEFSITGKTF EGKTIDEITWTSGGGLPKQFQLQDGVYKLTETKAPVGYEKANAVNFTISRGEAYVDGKLV DGNTIRVEDRVDTTMVRVRKIWSDHNYSERPTSVTFHLLRNSKQLQDAKYTRTLDNKNTS DWTYTWTDLPRYDADGNRYNYTVDEELTQELTGKEYRVSVIKRPYIDGAEFTVLNIREPE TASITVNKTWNDQDDNDGKRPKTLTFHIWGTSKQPKSGSTDETEDVTEQLVVQTVRTNGS NTQSWTFEGLPKQNLYNNPYTYTVTEESVDGYTASDVTLAGGTETRCAVTSTVKSCAFDV TNTHTPETTTLSVDKTWDDTDAPSNVKRPGDKATIWVLSSVWTDAKNQTLPGWPSPQHNS ECKNTGATDGTNPWGVSCMVLTSENAKATQATTANVNGADGTSEATTSQEVSANTWTYTF TNLPKYYKGKEIQYSVTEEAVKNYTPTLTGGKVAAADGAEGKANESGESDKADETSESGQ NAESWAYTLTNTYTPGHTSHSVHKVWKDYGDSSKRPKAVYATLYANGQSTGKTVALSDGN NWQYTFTDLDENKVYTVKETNEKGEAISGVDGYCQPVISDDRKTGISTITNTISIVLPST GGQRWCYGTLLAVVALGMIGMGYGIAKRNKTNKEGDAR >gi|148337424|gb|DS264436.1| GENE 51 87048 - 89540 2375 830 aa, chain - ## HITS:1 COG:Rv0782 KEGG:ns NR:ns ## COG: Rv0782 COG1770 # Protein_GI_number: 15607922 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Mycobacterium tuberculosis H37Rv # 504 824 216 531 552 354 54.0 5e-97 MNDPSASEQDGFGAIPRAKRVPKERVFHGDTFIDQYEWLRDKQSQDVQDYVAAQNRYCEQ RMAPLASLRKTLFEEFKSHVQETDMSVPTRMDGYWYFTRTMQGRQYATQCRVPIRGADDW DPPTVEAGVPLDGEQVVFDTNAEAQGHDFFRIGGMDISKDGRWMLYGTDTTGDERYDFRI RDLETGDELEERFEGIGGACFTPDAQWVFYVLLDDAWRPYAVMRHRVGTPVTDDVEVYRE ADERFWVGIGLSFDERNIVIGTGSKTTTEVLMLPVDTPEGSFRAFIPRETDVEYDVSFAC FEGAGEHGEDIPLAVVYHNALNPNFEIDVIDMRTHEPPYRLGEGVRVAVGSPYGCEHGDD VDPGASSMPIGTPYSNPCNPAILQGAHGLGIEGISIHRHFVALQYRAESLPHIAVMTKRA AAEDFLAGRPWRFTELVPHALEDDWDVDESVDEINEERAEIWGKLDAAAAAQGKGSAVHG VSRRAMTSSDGATADRMPGETRRLYSIGVGGNPSYDAPRMRYSFASYTRPGELHDYDPDT GEDRLLKRATVLGGFDPRDYMERRVWVTARDGERIPVSLVWRRDVPTCDSAMFITGYGAY EISSDPGFAVSRISMLDRGVLYAVPHIRGGGEMGRAWYEQGHLLNKKHSFEDFIDATRAL QRAGLASPLRTVANGGSAGGLLMGAIANMAPECYAGVEADVPFVDALTSILDPSLPLTVT EWDEWGDPLHDADVYAYMKSYTPYENAPDSENDERTAVFPKIFITTSMNDTRVLYVEPMK WLARLQHAGVDAVAKIEVEAGHGGTSGRYKQWEEVSYENAWCLSVMGVTS >gi|148337424|gb|DS264436.1| GENE 52 89667 - 90971 1368 434 aa, chain - ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 95 417 27 336 344 187 32.0 4e-47 MSEIQPLPQFPPQRAPQHDQQREQQRMGERMDDSCDDMPTVPIPARKVVTTFDAASRHER LEVKPPLTRLFRRTITKAFSVWLKFSTALVRSLDWYPRVEPYVGYGTEHYSRLICRTVYG PFKRQAGRLIRGIRGMLMVPSPHTKVRIAIDDVPIETVQVGASEVYDAIDSNPDISSEFA ASDDAGYLDLVAEHSLEPGIHNVSYKVRSRKPVNANLFTIPSGTKVGVISDVDDTIMVTQ APRLMKAAYNLLLLNPRKKVPVASMNLLFNRIADMFTDAPFFYLSTSPWNVESSIRHFIT NHGFPEGPLLLRDLDPRPKTFVPSGVQHKLEYAEQLMADFPDMKFILIGDDGQKDPTTYA TIARRYPGRVLAICIRQLTPREVAGNIGSVAGRANTQPMPVTDVPVFTGATGSNIMKTML PYLRATQAADGETD >gi|148337424|gb|DS264436.1| GENE 53 91179 - 91592 508 137 aa, chain - ## HITS:1 COG:aq_1108 KEGG:ns NR:ns ## COG: aq_1108 COG0509 # Protein_GI_number: 15606376 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Aquifex aeolicus # 22 133 17 130 171 92 46.0 2e-19 MGGMSEANDSKVNLDVPEHLEYSDEHVWVDSSVEPAMVGVTEYATEQFGELVYIDLPEVG TQVEAGDEVAEFESSKAVTALVSPVAGTIRYVNNEAADDPSIVTDDPYGEGWIFKIELED DEPDLLSADEYAKIVAD >gi|148337424|gb|DS264436.1| GENE 54 91639 - 93471 2279 610 aa, chain - ## HITS:1 COG:CAC0747 KEGG:ns NR:ns ## COG: CAC0747 COG1376 # Protein_GI_number: 15894034 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Clostridium acetobutylicum # 127 598 9 462 466 61 22.0 4e-09 MSDRSGQNDTDNSFAGISFEGVNAVPPQSGENGDTINLADVADVSEQDDVSNAATETMPP LNFASDQTQPFQSFPTAGAAETTPAGTVPNGAVPTGAIPTGDMPSSTPAPAIPVLTMPVE GEAVVAKKRKLPLIITGIVLAVLVVAAIAGFFTARWYFQDKAAPGVTFGGTSVAGQTADQ LKNTVTAAVKNTTVNIKDGNGNNASGSLSDLGVSYNVDKTVTELLAAKHQTNGALEYINE VNPFVKKNVPLNAKSNKLALRTFVTDKFVQDTDRAVPSTASYDANAHAFVAVEGRGGRSP KVDNVIDTVAKAIANPGHSGNVTITYETIDVPVALPEAQNVADQANARLNAPIVLDNGQG KTFQIPAEVVASWLKTDADLEHGTLSLSYDDNAITNYVQQQVPAQLNQDAVDQEDAVDNS GKVLATIVKGVNGVKVKNMEALAPKIGEALKNGQGATIPVDGDVQNFKTVQKKSEYRIVV DRTAQTATVYHNDEAVKTFPVCTGTTGKHETDLGTFYIYLKYQIQDMTGLNDDGSRYLSK GVKWVSYFYGGEGFHTASWNNYGIAHGDPAHYGSHGCVNMYEADSKWIYDNCPEGTIVQV VGAMPSGPVR >gi|148337424|gb|DS264436.1| GENE 55 93621 - 94718 1072 365 aa, chain - ## HITS:1 COG:CAC3396 KEGG:ns NR:ns ## COG: CAC3396 COG2816 # Protein_GI_number: 15896637 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Clostridium acetobutylicum # 177 360 100 267 271 131 39.0 2e-30 MSVFSPLALTQTLPFLPLAQGDIDYEVARRGEPDLFAKVLAEPATKVILVKDGKVAVPHG QGAIADYANVKMRLAQLPGAYVAAELESHPSALAIFLGSYGGRLGEHVVAVDVTHVQPND TTITAATARSGGADDAFAEVPAHESQENAKSLLESAATRFDWVDLRGFAPHASAREAGQA TSAISLSMWHARQRHCPTCGAPVKPALGGWAQHCTNDEDGNRLLFPRIEPAVITAIVDHD DRLLLQHNSAWRNNGLYSVSAGFVEAGENLEHACRREAKEEVGIEIGELKYLGSQPWPFP SSLMMAFKGVAVTTDVHVDGEETLQARWVTRDEYMSELVSGRMEAPGKATIARYMIEEWL GHDLP >gi|148337424|gb|DS264436.1| GENE 56 94866 - 95726 972 286 aa, chain - ## HITS:1 COG:aq_327 KEGG:ns NR:ns ## COG: aq_327 COG0596 # Protein_GI_number: 15605847 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Aquifex aeolicus # 22 283 10 250 256 91 24.0 1e-18 MTIELNNNVYADGGNDTETTPVVLVHGFPVDHRMWDECAAALRDQAVKQGVKPFAIWAPD MPGAGEGPIPSDEDSGGKDADGAFPYGLDRMADAYVGLLHAAGYGKAIWVGLSMGGYLIL DIQRLHPEAVAALALCDTKADADSADMRLKRVAIATDCETTGTHEPVMGFAVPSEADSTV KQSDAYCRQFETWINEQPADGIAWRERMAAGRPDLNDVLPNINVPVAVICGDKDPSSPPA VMKPVADAMTKTDVTMTVIDDCGHFSAYEHPDQVAAALLELVKRVG >gi|148337424|gb|DS264436.1| GENE 57 95801 - 96412 784 203 aa, chain - ## HITS:1 COG:no KEGG:BAD_1348 NR:ns ## KEGG: BAD_1348 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 203 4 206 206 379 100.0 1e-104 MNDEVPDEGDFDANRHRGEFDDITPEDFIRGMGNPPGWLPSDEINRMRHEIPIPYVVVVP VRTDDLGRVAQIGSLLRVTDDGGIERTLIAGRVLYHESLREAVARNVAKDLGDIALPQLP ISLQPFTVAEFFPTPGLSDYYDPRQHAIALCYVVPIAGDCKPQDETLDVEWVDPSGDMLD TFVGQMANGYGTIVRQALAWTGK >gi|148337424|gb|DS264436.1| GENE 58 96618 - 97022 605 134 aa, chain + ## HITS:1 COG:Cgl2917 KEGG:ns NR:ns ## COG: Cgl2917 COG0526 # Protein_GI_number: 19554167 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 109 1 109 124 109 50.0 1e-24 MATHAVTSQDFNQVVESNDLVFVDFWATWCGPCRAFGPTFEKASEANPDVYFAKVDIDQN PDLAAAAKVQAVPTLMVVKKQQIIFQQAGALRASDLDDLISQAKALDMDAAASDGDTASS GDAKVKTPSSQSER >gi|148337424|gb|DS264436.1| GENE 59 97181 - 98176 1334 331 aa, chain + ## HITS:1 COG:lin0225_1 KEGG:ns NR:ns ## COG: lin0225_1 COG3583 # Protein_GI_number: 16799302 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Listeria innocua # 102 233 175 314 314 63 32.0 7e-10 MASHKKHAQPTTFALPGKSQMVKIVATVAAVGLLATGGIVSHNLYATAEKSPAKQVTAYS VTDSIEASRGNAREALSGDTSYVTVKINGKTRVVPGMHFTDVKSVLDAGDITLDTEDTVS PSLDTKVNENTVIKIERAGASVEVSDTDIAFNTVKKETSSLPKGQEKVETEGANGVMETT NLVTKSGGKVMSSNMISSFVKKAPTDKVILVGTGSSSTPSAAAASIGTTVPAGEMQQWAH DYLLSSGYSEADFTATVYIISHESGWNVAATNPSSGAYGLPQALPGSKMVSAGADWATNY QTQLKWFWGYCAQRYGSIQGAYTYWQAHHCY >gi|148337424|gb|DS264436.1| GENE 60 98653 - 99141 435 162 aa, chain - ## HITS:1 COG:no KEGG:BAD_1353 NR:ns ## KEGG: BAD_1353 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 155 1 144 151 142 51.0 3e-33 MSVLDGFEAVGEKITTNKMTMTVMESSVRFSKGVTEALGCPAYVKLLVNDKQKKIAVQAC DAKDENAIKFCKTKRSKADGVDSDAAGKASSVTVRTTDVLVAVQKYFTFPPVADDQIAYF AMNGESYPDEKVVIFAVADAAKGVSGKRGPRKGSHHTAKDGE >gi|148337424|gb|DS264436.1| GENE 61 99375 - 101162 1739 595 aa, chain - ## HITS:1 COG:no KEGG:BDP_2037 NR:ns ## KEGG: BDP_2037 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 20 594 21 594 602 437 42.0 1e-121 MGQHAQAIREKHTARNVTLIVLAVLIVLLAIAAVFGMQLYKQAKSVKAHESQAISSLSAI NDPAKLKDAAASQAYIAQAQQQTAQAKQIAHGSLWNVAAKMPFVGSDIATVQGMTEVVDN LAQQTLPSLTTAVQQLAGANLSGAEGQLNLQPIADAQGNFDKLNQQVQQQNKQYNSLAEP KIGMVKKAYQQGKDQLDNIVDLVGQVSNATHMLPSFLGQNGARTYLLAAQTTSETRSGGG LVGSLGTMTADHGKIAVGDFHPNGEFVNGNNGTAEEHAVFNRPLGFSFDVRDTFAVPDVS RNAEMLNASWQRSQYACNIDGLISVDPVFIQKMVEINGPVTLSNGTVLTGENTAEYMLNT IYKDVPVAQQDEYFEYIAKTVMDGAFGNMTVDKMMKVAQSIGDLAENRHFYAYTFHDDEA KYFQGAGLAKNAPESETNPETGIYISEQNPSKMGWYIDRTSEVTKTGDKTYHVKYTLTNR MTSTEMATCTSYILGGEQKGVGGVPVAPSGTSAQRVLIYAPAGGSIGSIAVTGDVRDRSN ATMDGKPLNSSMAYIAPGKSVTYEFDVTVSDKATADMKLDQTPCGKMTNDVKYNY >gi|148337424|gb|DS264436.1| GENE 62 101313 - 102977 1081 554 aa, chain - ## HITS:1 COG:CAC3073 KEGG:ns NR:ns ## COG: CAC3073 COG2148 # Protein_GI_number: 15896324 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sugar transferases involved in lipopolysaccharide synthesis # Organism: Clostridium acetobutylicum # 358 548 27 216 222 206 52.0 1e-52 MQGVNTGESGAPNGEQGMRTQEIHIVSSNAHRQAYASMQNQRLQKQFEPMTFSNTPFPAE KEGHRRGKAESTPRWRFAFVASLIAIDLAVMLLSLTVSLVINGAAFDAIGDVMPFWLFLI LFSLIWLLCLAFAGTYHRHVMADGYELYAKIINASLLTIISYCSLAFIFKLALPRTALII APVIAFFLDIIARWQMRQALHRHRSKGSCKYRTVVIGSSDGINKALQTMRNCMNWGCEPV AVCPIEADPASKDAYVVTSYTPDANIEGSSKLKVIPFNSAFPRICESLGVQEVYVADVLS RDSEMLHGLSLAVESLGMELALAVSLADVSGHRLYLRNTTEQPVLLASLPQYTGAANVIK RLLDIIGSLCALIISSPILLGVAIAIKLDDGGPVFFSQTRIGLHGKPFKMYKFRSMVTNA EELKKKLAEETGQEDRFIFKMKDDPRITKVGHFIRKTSLDEFPQFYNVLKGDMSLVGPRP ALPEEVARYGSLYSARLLVKPGITGPWQVSGRSDLSQEQSEYLDVSYIENWSIAGDLAIL AKTVMVIFTGRGSY >gi|148337424|gb|DS264436.1| GENE 63 103100 - 104359 1018 419 aa, chain - ## HITS:1 COG:no KEGG:BDP_1858 NR:ns ## KEGG: BDP_1858 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 55 298 128 375 450 169 53.0 3e-40 MPLDTIDFDDAVAPADAEETATLPPLVSSTDEQDAEATQAFDTSDGITDLEELAAEDPEH DPLKTIPVAPKEPSADKRKIIAIVAAIAAVAVAIAGVIVVRNRINSKEQRAAVAVCEKAK SKYSKANEKLQNAIEQATSLQGTAANQVADAATIDQLTQAVTKAQNLKTVGGCSVLLSET TLRAHARSMSKQISNIKEQTKAVTAAATAVDASKRALEVNKTTAALQKAIADAKTLLDGS AGEVADESTRDALAKAIDAAQKLLDGKSTDVMAMQNASKVISSTSDGVNKSVAEQTAANA QSNTNSNTNNGTTNRRYTYTWQFGPGSGNGVNGGGSTGGNNNGGSTGGNGDSTGNGNGGS TGGNGGSNDGNGGSTGGNGDSNGNGGSTGGNGGNGDSNDNGNGGSDGGNDNSDTGTAGE >gi|148337424|gb|DS264436.1| GENE 64 104636 - 106123 1362 495 aa, chain - ## HITS:1 COG:Cgl0343_2 KEGG:ns NR:ns ## COG: Cgl0343_2 COG0489 # Protein_GI_number: 19551593 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 258 467 2 208 246 143 39.0 9e-34 MTSVENANVQQPTAPQGVVEEADDGITLMDLFKIIRKHLVTAIIAFVVVVAGVSAYTFLA PAKYTATAQTMATYNASQNGVDINQQSAGGSYISNQITSYPTLATTSKVLKPVIDDLGLD ETVTDLAGQVTVTNPTNTAFVNIAVVDGDPKQAADIANSVAESLKNVIESDLYSGDKSPV KLSIVQKAQVPMSKSSPKTALYLAVGVVLGIIIGVFAALIKDLLNTKVEETSDVRSIVRA SSLGSVPMDASLDDKRPVLVSQPNGAIAEEFRRIHTNIDFLQTDRTEGVGQLLVITSAQP SEGKTTMAINTAVALAEDGAKVLLIDADLRHPSVAHHLGIEGAAGLAHVLSGQMGPKDVV QSYWKPNLHILPGGKRPANAGVLLSSETMKLMVEQALTQYDYVIIDTAPLTVSNDGAVFG RWAKGLLLVVSRNVCEKKSLQEAVDTLATAQVPVLGFIFNRADPKKVNSHSNYYYYHEDG ASRSSHRANGKKKRI >gi|148337424|gb|DS264436.1| GENE 65 106047 - 106535 272 162 aa, chain + ## HITS:1 COG:no KEGG:BDP_1394 NR:ns ## KEGG: BDP_1394 # Name: not_defined # Def: excinuclease ABC subunit C # Organism: B.dentium # Pathway: not_defined # 58 162 174 279 279 126 54.0 3e-28 MPSSASSTTPCGAVGCCTLAFSTEVTELPHLTLTISFPRIIFPLELFGHYRENDKASWKN TLSRQQGVYVITHTDNGKLYVGSATGRNGIYQRWQDYISNGHGNDTGLIAIVKQHGLEYV QAHFRYTLLEHYDFTVPKDVVLARESYWKEALDTRKHGYNGN >gi|148337424|gb|DS264436.1| GENE 66 106836 - 107978 919 380 aa, chain + ## HITS:1 COG:alr3406 KEGG:ns NR:ns ## COG: alr3406 COG1106 # Protein_GI_number: 17230898 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Nostoc sp. PCC 7120 # 14 363 79 443 463 103 26.0 4e-22 MRNMVVNSYSQGDASSPIPREPFLLRKDPFSHSSMFFLAFIANDGLKYQYWFRYDNERIL EEDLIFFKKLQGRFSTHSSLLFSRSSTDGVKFGPSFKGPRSQVRKTIELRPNALLLSAAA AAGIESIRPAFSFFQSGIAYYEASAFEQEQPTLLDEFKKETPLSKHLATLIRYADFGISD VKSVPVDVPPDLWAQFKEEMHKQLGMDENKVDETFNVKNASQLMFTHTGESSSAGFGPDD ESRGTVAALSFFSLALRQLSKQSVTLIDEIDTSLHPALVKELVALYADAETNPHGSQLIF TTHDVSLINQSGSAKRLLAPDQIWLVEKNKEGVSELFPVTNLGIRNMENIGKNYLNGVYG AIPRPDFHTAFAQIVNVVDA >gi|148337424|gb|DS264436.1| GENE 67 108059 - 108634 138 191 aa, chain + ## HITS:1 COG:no KEGG:BL1235 NR:ns ## KEGG: BL1235 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 1 184 28 211 216 275 78.0 1e-72 MAGGAVTEKQYFKQLESLYDVIIDYQQKNNSPKQLAKLAVKLKREDKRDTSTDCYERIWV VVDVDDFHDHGEAARICNDNGIELIISNPCFEVWLLDYVKACPSSYTLTPDVESAAAEAK VVGGTRNKYINTELIDKEHLEAAIRNAARHNTTENRQGRNRLAPNHEQEYAPWTDMPKVI EALQQASDNSK >gi|148337424|gb|DS264436.1| GENE 68 108744 - 109385 383 213 aa, chain - ## HITS:1 COG:no KEGG:Snas_0319 NR:ns ## KEGG: Snas_0319 # Name: not_defined # Def: hypothetical protein # Organism: S.nassauensis # Pathway: not_defined # 8 212 106 297 297 107 35.0 4e-22 MNADLIGLQYTDYLLMKLDEDMRDEQCIFPSSEEFHSHIQNLDTILEESGSKWKVGERNS ICGLEERVDPAMQQMVDNAMDSSSGYGQQLSEAWHYMFGREPNYSAAYEAAIKAVESIAL PMVEPNNKDSTLSKAARVMRDQRWEFQIEAREENNVPGGVIQLLMSGLMNSQPDRHGGPD PVAVSREKAQAAVYSAVFLVQCFKAGLVRRPAS >gi|148337424|gb|DS264436.1| GENE 69 109808 - 110227 206 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488276|ref|ZP_02029393.1| ## NR: gi|154488276|ref|ZP_02029393.1| hypothetical protein BIFADO_01850 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01850 [Bifidobacterium adolescentis L2-32] # 1 139 25 163 163 260 99.0 2e-68 MSTEHPGLNNVANFLTVIISAASIIIAFASYNYTKDHDQPIYDVVLTSGAYQGAGSDYLS GTDFTTCIGTVPPGKFTAYVPYPGEGMHARVESAIAFRDNKGNDWIRDAKGILSEIKTNP YEYLKLDLPPENWQSLESE >gi|148337424|gb|DS264436.1| GENE 70 110340 - 110558 255 72 aa, chain - ## HITS:1 COG:no KEGG:BL0227 NR:ns ## KEGG: BL0227 # Name: rmlA # Def: glucose-1-phosphate thymidylyltransferase # Organism: B.longum # Pathway: Streptomycin biosynthesis [PATH:blo00521]; Polyketide sugar unit biosynthesis [PATH:blo00523]; Metabolic pathways [PATH:blo01100]; Biosynthesis of secondary metabolites [PATH:blo01110] # 6 60 247 301 301 107 90.0 1e-22 MRLLLQGLPIAIVEEIAFENGWITRDQLMESAERYGKSLYSQHLKGIADGEIMLVPNQKS LFSGDIHLKGAS >gi|148337424|gb|DS264436.1| GENE 71 110583 - 111317 284 244 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0421_20085 NR:ns ## KEGG: HMPREF0421_20085 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis_ATCC14019 # Pathway: not_defined # 1 233 1 229 240 201 45.0 2e-50 MVHKPNAGHWGKSKPRNKRFLIYSGGIVTEVEYFQYVRRHLFGDYVKNLRIKSGEVDDPV RVEADGVDPKTLVEGAARLLHEDKKDAKKESYDPFAVVWAVTDVDDFGKNGDKLRAAVDK GRQSGVEVIISNPCFDVWLIDHKQPCPLSYTQTSECEKLAKRLGLIDMSRNRNNPKHIRQ EAIAGKYATAAKNAQKHMGEQHRRIRDNRPSSGDYAPWTDIPKIVDTLIEEYKTLINKGE EETL >gi|148337424|gb|DS264436.1| GENE 72 111391 - 112743 595 450 aa, chain - ## HITS:1 COG:FN1198 KEGG:ns NR:ns ## COG: FN1198 COG1106 # Protein_GI_number: 19704533 # Func_class: R General function prediction only # Function: Predicted ATPases # Organism: Fusobacterium nucleatum # 1 430 1 413 420 116 28.0 8e-26 MLLNFTVENCLSFKSEQEFTMLRKGQHSAQDEQGAWNRISPVAVIYGDNAAGKSNLLKCM NFFSNFVRNSFAPREGINTQPFLLDNESAKQPSTFYIEFIAKDENRYQYWFSIDAHKVRE EVLWMFRSETNRRTVIFEREDGKKTKIGAQFHNIGKIAHLVRENALLLSAAAALNITSVM PAYDTIANGIQCYPAVDFDNSFGVFVHRIRKNPRRALLLSKLIRVADLGITDVDFEEKDV PEELLEELRKLAESGISGSSAPAGDEPLGDSSSSSPSSEYFMPRVLFSHQGRGVIRQLSE QWESQGTKNVMLLFDWVLDSLERPSITLLDEPDVSISTSLFSEIIKLYRDPATNPNNSQL IFTTHNETLISASGTDDRVLDRDQIWIVKKDPNTGESTLNWLMDWSPNSKENFGKNYRHG VYGGLAQPNLYATVKEHFDNAKNAGKESQR >gi|148337424|gb|DS264436.1| GENE 73 113198 - 114271 1399 357 aa, chain + ## HITS:1 COG:no KEGG:Blon_2087 NR:ns ## KEGG: Blon_2087 # Name: not_defined # Def: proline symporter # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 5 334 8 337 358 517 83.0 1e-145 MFMILMHHFIVHNGYDVLKLPLGPERIFFQLVMQGGGKVGVVIFFSISAWFFLDKEQTIK SNLKRVWIMERELLFWSLILVAFYLVFDRTDLGMKLMVKSIAPLSMGLWWYATAYAIFLA LLPFLSRGLKALGREYHLALAATVLTIWGLLSFIPGAQSLSDNVFGFIYVFILISAYKWY MKPFTTKQIWLLTGIGFGFFLLYTVASATLSLMGHDMGIFITGSWRLPVVMVGFGMFLLF DRVTFHSRIINRIAQSAFSVYLITDYAASEKLLWVRLFNLQNLYQQPWAILLTLGILLAI YAICTLLDFIRQALFAVTVDRRRGHWFELLWDRIFQIEAQSAESPAGRFNQYPMSSH >gi|148337424|gb|DS264436.1| GENE 74 114543 - 115034 255 163 aa, chain - ## HITS:1 COG:no KEGG:Balac_0578 NR:ns ## KEGG: Balac_0578 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 26 162 21 164 164 90 38.0 2e-17 MPERYTNEWWHIQAPPLVFPSDDFAEAMTQAIVRVHREQLDDTGGFTVERANDAGSVSNV VDSTFLPVFGQAPKERFEDLFRQVAHLTFHLAKNHYFADGNKRTAMAISLAILKMERIDL DIDDDPEPEQNTLYKLISRLVTEEITEEQFAASLRRSGRLTDE >gi|148337424|gb|DS264436.1| GENE 75 115027 - 115533 267 168 aa, chain - ## HITS:1 COG:Cgl0313 KEGG:ns NR:ns ## COG: Cgl0313 COG3600 # Protein_GI_number: 19551563 # Func_class: S Function unknown # Function: Uncharacterized phage-associated protein # Organism: Corynebacterium glutamicum # 17 130 21 138 148 69 37.0 3e-12 MNSIQVANAFILRHGSDIDITNLVLNKLVYFAQVESLRETGKPLFEDKIEAWSYGPVERD VYFTFQKYGRNRIPKPEGETAKDERTLSVVDRTAKKYGFLTAFDLVGFSHRKNSAWKNVY RKGENVEITNDDILASDDGLTFPKNTLASSLDEVNAKWQNTFRILRNA >gi|148337424|gb|DS264436.1| GENE 76 115612 - 115827 233 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488284|ref|ZP_02029401.1| ## NR: gi|154488284|ref|ZP_02029401.1| hypothetical protein BIFADO_01858 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01858 [Bifidobacterium adolescentis L2-32] # 17 71 1 55 55 96 100.0 5e-19 MSVPNHLHVVGVTYARMANGSFGYTVFGAGAYVSLGYGTLEAVRIKYCRRCNTSRLTIKT EQKQATSSCAL >gi|148337424|gb|DS264436.1| GENE 77 115935 - 116198 133 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEAMNLEILRLHPMQNYGTPYDYDVDGFNENGWHSSFIIETTKQQEENDYWSFYQPRKGG TNQRSSTNWSHDPLLVYDNRQKSPLII >gi|148337424|gb|DS264436.1| GENE 78 116558 - 116722 93 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDGFSAIGHVIIIDFWHGRCPSFYIGKAQPMTFKRGATLYRLFKPQNILWRRV >gi|148337424|gb|DS264436.1| GENE 79 116921 - 118012 538 363 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0808 NR:ns ## KEGG: BLLJ_0808 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 5 356 223 578 591 93 25.0 1e-17 MTNSEGYSVVIEAIAKYKAAPDFSPLKTSCTLYAETPEDKKKLHDFVKYGTPFNELPVKN IKENLKLPALEMQQDEMFSRIGLLGQIDPHPLTLVLISDDTHIALEQKSRTSGRIGGEWT GEDKSGAIHIRLRTEANSLETTLEITPHLTSLSGSEVLPAFKAIDFLYTNSQSKNLELQT LHGKSIYSNPTSTNMQILDQETILPWYELLLSLKEIHDEALVDFQCPDFASLNEKQVQRW KEIEHLLKGECVIRHWDTIKICRESDKPVALPAGIAVLSELIATIGTQRIPLGYTQRLLN AAFMDIPKNNENEYILHSEASICDLLIEQKIAIKPEDRDKISHVFIGPLLDLSEYTKNMA PIQ >gi|148337424|gb|DS264436.1| GENE 80 118189 - 119094 1102 301 aa, chain - ## HITS:1 COG:YPO3861 KEGG:ns NR:ns ## COG: YPO3861 COG1209 # Protein_GI_number: 16123996 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Yersinia pestis # 1 285 1 282 293 385 64.0 1e-107 MKGIILAGGSGTRLYPLTTVTSKQLLPVYDKPMIYYPLSVLMMAGIRDILIISTPKDLPN FQRLLGDGSHYGVRFSYKVQPSPDGLAQAFLLGEEFIAGEPCALVLGDNIFYGNGLGATL RGAVAKAESGGGASVFGYYVDDPERYGVVEFDEDRKAVSIEEKPAHPKSHYAVTGLYFYD EHVVEYAKRVKPSPRGELEITDLNRMYLDAGMLNVRTLGRGYAWLDTGTMDSLFEAGEFV RTVQRAQGLPIAIVEEIAFENGWITRGQLMESADRYGKSPYGQHLKGIADGEIMLVPNQK N >gi|148337424|gb|DS264436.1| GENE 81 119170 - 120612 1558 480 aa, chain - ## HITS:1 COG:Cgl0332_2 KEGG:ns NR:ns ## COG: Cgl0332_2 COG1091 # Protein_GI_number: 19551582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Corynebacterium glutamicum # 191 480 2 271 271 246 53.0 8e-65 MDFEKDLRAVGTNIPGLVVFDLPVHGDNRGWFKENWQRAKQTALGLPDFGPVQNNISFNA KKGVTRGIHAEPWDKYISIAAGSVFGAWVDLRPGDSFGQVYTTILDPSKAIYVPRGVGNS FQALEDGTVYTYLVNAHWSLEQKKTYTFVNLADPELDIQWPIPLEDSERSEADLHHPMLK DAKPMAPRRTMVTGCNGQLGHAIRDYVESHGLEGFEFNDIDTFDFSDPAQYDQFDWSLYG TIINAGAYTAVDKAETPEGRALAWKANAQGPALLARVAREHNITLVHVSSDYVFDGTREM HDESEGFAPLGVYGQSKAAGDIAVSNAPRHYILRSSWVIGEGHNFVKTMMGLSGRVAKGE LGKVTVVDDQYGRLTFTRDMAEAIFHLLDSDAAYGTYDLTGSGSVRSWADIARMVFDLAN GNGGKVEPISTAEYFANAKNPVSPRPTYSALNLAKIEATGLKVPDWEESLKAYVTKELNK >gi|148337424|gb|DS264436.1| GENE 82 120538 - 120747 139 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHRQIKHHQARDVRPHGPQILLKIHEIHLSYAFSILHKTAHRIEEPLFFNTFILQNDCSY SAKPIYFAE >gi|148337424|gb|DS264436.1| GENE 83 120872 - 121894 1000 340 aa, chain - ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 9 337 3 340 346 493 70.0 1e-139 MVEETFIPKNIIVTGGCGFIGSNFVHYVVDHHPDVHVTVLDKLTYAGNPENIAGLPEDRV ELVVGDICDADLLDRIVPGHDAIVHYAAESHNDNSIADPEPFLRTNVEGTFRLLEAVRKY DIRYHHVSTDEVYGDLALDDPARFTEHTPYHPSSPYSSTKAASDMLVRAWTRTYGIRATI SNCSNNYGPFQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILTKGR IGETYLIGADGEQNNITVLRMILRMMGQSEDAFDWVKDRPGHDRRYAIDSTKLRTELGWT PKHTDFESGLAQTIEWYTENRAWWEPAKAATEARYKRQGQ >gi|148337424|gb|DS264436.1| GENE 84 122330 - 126139 4719 1269 aa, chain + ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 70 676 44 631 660 393 38.0 1e-108 MKHRKPAPTWHRLGLKISKKVVVGITAAATAFGGLAIASTAAQASTDRDSYADTVENTTF EQARKHYGLAQQMSEGATLHAWEWSFKTIEENIPAIAEAGYTSVQTEPISAIHNGGKGMI FTENWYYVYQPTDTTIGNWVMGTEDDLKSLCNTAHKYGVRIIVDVVANHMTATWGAIADR WKKSEYYHHDCNDGDVQDWNNRYQVTHCKLLGLYDINTENTETANMMHDFLVQAVNDGVD GFRFDAAKHIELPDEYNGSQYWNIILNNGAQFQYGEVLQDSISRDSDYAKLFSSHSKNGG GVTASSYGSKLRGALNSKNLNAGTLSDWSNSASPSNLVSWVESHDNYSNSDRESTGMSEW QMTMGWGVIGSRSQTMPLYFDRPVGSGGSQPQFSEESKLGDAGADSWKDAQVVAVNHFRN TMNNNKASEYLRNCGANSCLMVERYIKDGNFKNDGVTITNMGDTQELSGTATNLDDGTYK DQVSGGTITVSGGKITSGSAPGGKISVFFTDNSGSVSATPGDSSFKTDTTTVTLNANNVT DAIYTTSEGKSGSYQDGDTITIGASTAIGDTITVKLQGKDADGQTVSATYKYTKKDPAAT STAYAKKPSAWSNLYAYVYVDDSSATTLKENAKWPGEPMTQVASGDTCGKDGEYKYEIPD DLEGSNTRIIFNDGNATNTQKYPADATEGVDAAGLKIDGNYAWDGNTSSGTWEARNCVVT PTKSVRIDQSDYSVDLSDGVATKQLTATTDPKGASVSWSSSDKDVATVSPKGVVTPRKAG KATITAKSGTKTASITVTVTGELPPDPVAKNTVYASKPSGWGKIYAYVYTGDGATAANNA AWPGVEMTAPSATDGCQQTDLYKYEVPDSLAKGAKVIFNDGGSQQYPGSRQPGLDYNGGI VKWDGSSAALAAVECETTIPVTSVSVSGDGVSGGKLSLKSGASVQLTATVKPDNATDRKV TWTSSDSSVANVMGTGVVTAGSKAGKATVTATAGGVSASVEVTVEAQDPYAELDALAKAH ASDLEDGTYAVSTALKDGMVLDVADGSRKDGANVRLWSSNGTKAQQWTVSHDSKGYVTLR NVNSGKALDVKDGKAANGSNVHQYAPNSYRSQKWVAVRSGSVYKLVSALSPSMALDVKDG KAANGSNVQIYTANGYRSQQWTFKTVAQPLKSATVWYRPSSAQSRVRVQWRVYGSPDTTG GMEMTQACGGWWKATVPSAGSTRVGLSFSYGSTTDDNGGKLYDVKGESAAVSGGQAVTDV TPNCAVTNK >gi|148337424|gb|DS264436.1| GENE 85 126738 - 126926 73 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MILPLGFQSRFALLNEKAHKAQTTSSYIKGKIRKYAGFWALSTHIIFFPERATKSQSKHQ HT >gi|148337424|gb|DS264436.1| GENE 86 126861 - 127508 606 215 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487980|ref|ZP_02029097.1| ## NR: gi|154487980|ref|ZP_02029097.1| hypothetical protein BIFADO_01548 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01865 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01865 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01548 [Bifidobacterium adolescentis L2-32] # 92 215 1 124 124 199 100.0 2e-49 MQTRSVYVVMMCTLLILLAIKKHKKVSEIRIRIFPVLLFIFLAVIFFSISVSPNSYLYSM TFGRFSTLLDSGSFLQRSGSISFLLQYLSKKMTLATFLGNGFGSLAHYLNVNNIYFVSKD FFTVDNQYVTAFFEIGILGYMLFLILLSLILIPGFKTMHMSDISIVRMIGTPQAMCIALL FSVFFFECYDKPVVLCMLMLALAFCSSFREKYDMR >gi|148337424|gb|DS264436.1| GENE 87 127758 - 128000 64 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSGASRRCHPSEAIRERKTDPRVARARNLGLHLPPRACVISMPPGVSGLPYTRHCTRTRD CADEGRYQTVAGLQRLGDRF >gi|148337424|gb|DS264436.1| GENE 88 128217 - 128726 -232 169 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487969|ref|ZP_02029086.1| ## NR: gi|154487969|ref|ZP_02029086.1| hypothetical protein BIFADO_01537 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01537 [Bifidobacterium adolescentis L2-32] # 1 169 1 169 169 266 99.0 4e-70 VEGPSGLARSIGDTFWYVRSVSSEVERGSFVMSKRCQLTGHQLTSDGRMSVERWISARSD EPTGPATDGGRPGPRHGAERSSGQVRPGSYASWSVAKPTRRIGGRHVRGSTALKAAWSLD VADGSRKDGANVRLGVVERGRRRSSGTVSHDSKGLRDAEEREFPARRWM Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:30:37 2011 Seq name: gi|148337423|gb|DS264437.1| Bifidobacterium adolescentis L2-32 Scfld0217 genomic scaffold, whole genome shotgun sequence Length of sequence - 1686 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 68 - 127 3.8 1 1 Tu 1 . + CDS 150 - 575 410 ## COG0451 Nucleoside-diphosphate-sugar epimerases - Term 757 - 787 0.6 2 2 Tu 1 . - CDS 998 - 1459 51 ## 3 3 Tu 1 . + CDS 1481 - 1685 272 ## MXAN_0133 hypothetical protein Predicted protein(s) >gi|148337423|gb|DS264437.1| GENE 1 150 - 575 410 141 aa, chain + ## HITS:1 COG:XF1825 KEGG:ns NR:ns ## COG: XF1825 COG0451 # Protein_GI_number: 15838423 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Xylella fastidiosa 9a5c # 8 132 2 124 332 75 36.0 2e-14 MSPHSMKRVFLTGGSGFLGGVLIQCLRADGVEVVALARSAGSAAAVEALGAQACRAGLGD TAAVATAMRGCDTVFHVAAHFTEWDTYAAFHQANVAGTESMLQAAREAAVAVFVAAGAVG VVMGRPKPMLGIRENWPLLAS >gi|148337423|gb|DS264437.1| GENE 2 998 - 1459 51 153 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAADTRGRPMRKRRTAVHGKPGTQARFTTSPACDNHGRDGFGREKCDRNGTIAADPRPV STTDRLQRAASLLPPPDASVRFRGDAMCAATAAPGCITFSHTPPTTAAAGHGPGDVRSNA PAPRTSVERAPPRSSIMRGAASTPMPRNRFQVK >gi|148337423|gb|DS264437.1| GENE 3 1481 - 1685 272 68 aa, chain + ## HITS:1 COG:no KEGG:MXAN_0133 NR:ns ## KEGG: MXAN_0133 # Name: not_defined # Def: hypothetical protein # Organism: M.xanthus # Pathway: not_defined # 4 64 2 62 350 67 57.0 2e-10 MKSSFRTNAGRLIPAAALLALSVPAMASTLNQNVSWTVDRSGTTAKYRVVAYGDSIFAGY NGSISNAA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:30:48 2011 Seq name: gi|148337422|gb|DS264438.1| Bifidobacterium adolescentis L2-32 Scfld0218 genomic scaffold, whole genome shotgun sequence Length of sequence - 1617 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 27/0.000 - CDS 3 - 642 750 ## COG0845 Membrane-fusion protein - Prom 820 - 879 80.4 2 1 Op 2 . - CDS 895 - 1617 811 ## COG0841 Cation/multidrug efflux pump Predicted protein(s) >gi|148337422|gb|DS264438.1| GENE 1 3 - 642 750 213 aa, chain - ## HITS:1 COG:XF2384 KEGG:ns NR:ns ## COG: XF2384 COG0845 # Protein_GI_number: 15838975 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane-fusion protein # Organism: Xylella fastidiosa 9a5c # 26 213 20 206 411 164 54.0 9e-41 MSRFRKIALVAVAAVVLGGAGLAALSQAPADPSQDKGQDKGEGAGAAGADAPVPVALAPV ARQDVPVYLIAQGTVQARNSVTVNPQIGGVRLVELHFKEGQEVKRGDLLAQLDPRNAQAG FDEATAKLRQDQAALATARSNYLRSSDAHYRQYVSKLDLDTQRNAVAQAEALVAADEAAI HNARVQLDYTRVLAPIDGIAGIRGVDPGNVVTT >gi|148337422|gb|DS264438.1| GENE 2 895 - 1617 811 240 aa, chain - ## HITS:1 COG:PA2526 KEGG:ns NR:ns ## COG: PA2526 COG0841 # Protein_GI_number: 15597722 # Func_class: V Defense mechanisms # Function: Cation/multidrug efflux pump # Organism: Pseudomonas aeruginosa # 1 237 351 585 1036 176 45.0 3e-44 VLAFLRRLRPTLIAMLSVPLSLAGAFVAMWALGYSLNTLSLVALVLCIGFVVDDAIVVIE NIVRHMELGLSPARAAAAAVGEIGFTIVSITLSLIAVFAPLLLGDNELVILLREFSATLA AAVVISAVVSLTLTPALCARFLAPEPVPPPQPSRLEATLQRLDQALHARYERALVWAMRH RRLMRWQPALLLLATLAVAWATLLSAGGGFMPEEDTGMLQATFRADTQVSPARLGEHAPS Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:30:49 2011 Seq name: gi|148337421|gb|DS264439.1| Bifidobacterium adolescentis L2-32 Scfld0219 genomic scaffold, whole genome shotgun sequence Length of sequence - 1771 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 64 - 237 88 ## gi|154487955|ref|ZP_02029072.1| hypothetical protein BIFADO_01523 2 1 Op 2 . + CDS 221 - 769 403 ## PXO_02803 PASs1 domain protein + Term 853 - 885 0.1 + Prom 771 - 830 80.3 3 2 Tu 1 . + CDS 1067 - 1769 905 ## CJA_2760 cellulase (EC:3.2.1.4) Predicted protein(s) >gi|148337421|gb|DS264439.1| GENE 1 64 - 237 88 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487955|ref|ZP_02029072.1| ## NR: gi|154487955|ref|ZP_02029072.1| hypothetical protein BIFADO_01523 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01523 [Bifidobacterium adolescentis L2-32] # 1 57 1 57 57 74 100.0 2e-12 MSGFHTIDERALRALGAADLHALAQAGYLEAIYMALASLSRLRDLIERLTRRRAAGR >gi|148337421|gb|DS264439.1| GENE 2 221 - 769 403 182 aa, chain + ## HITS:1 COG:no KEGG:PXO_02803 NR:ns ## KEGG: PXO_02803 # Name: not_defined # Def: PASs1 domain protein # Organism: X.oryzae_PXO99A # Pathway: not_defined # 5 178 3 177 337 125 47.0 9e-28 MLPAAEPIEELHGVDAAALPEHLLASTRPYVLRGLVAHWPLARAGAASMHEAAAHLAGFT SDVPATVSIAPPEAGGHIGYRPDLLGFGFAQQKASLPVVLDALLRYADDPAAPTLYLGST TIDTWLPGLREHNNLGFSALQPLASIWIGIPHSPSLRTKNCLEKFACVVARRCLLTLFFL AS >gi|148337421|gb|DS264439.1| GENE 3 1067 - 1769 905 234 aa, chain + ## HITS:1 COG:no KEGG:CJA_2760 NR:ns ## KEGG: CJA_2760 # Name: cel5G # Def: cellulase (EC:3.2.1.4) # Organism: C.japonicus # Pathway: not_defined # 1 221 261 482 583 243 53.0 5e-63 MLIVEGNCWGNNFRGVLDAGLWDDNLVLSFHKYWNGTGRDSIAEHLALRERWNLPLWLGE TGENSNDWFARTVATVEGEGIGWANWPVKKLRYNNPLQVIANPGYEQVLAYWEGKGPRPQ RAQAREALLTLAGRDVRFAHNRQHPDVADAWLRAPHDDRSLPFKPHRIGRDGGELAAADF DMGRNGVAYFDHSAANESGKPNADWNPSQLYRNDGVDLLRDGEGERMRVAMQPG Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:03 2011 Seq name: gi|148337420|gb|DS264440.1| Bifidobacterium adolescentis L2-32 Scfld0220 genomic scaffold, whole genome shotgun sequence Length of sequence - 1486 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 7/0.000 - CDS 3 - 480 337 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins - Prom 668 - 727 80.3 - Term 619 - 687 31.2 2 1 Op 2 . - CDS 729 - 1484 821 ## COG1020 Non-ribosomal peptide synthetase modules and related proteins Predicted protein(s) >gi|148337420|gb|DS264440.1| GENE 1 3 - 480 337 159 aa, chain - ## HITS:1 COG:BS_ppsC_2 KEGG:ns NR:ns ## COG: BS_ppsC_2 COG1020 # Protein_GI_number: 16078893 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Bacillus subtilis # 11 155 239 383 1505 104 39.0 7e-23 MTANLLPGRETTLYTLLQTAFGWLLARYGNTDDLCMATSIANRRRAELEPLIGCLVNTLA IRHRVEASLRFDQAAAAVADTVTAAFEHAEMPFEHVLERLEIARDGVRPPLCQVLFVLQN VPDAGALALPGLSIAPLAQEQRLARFDLSLRIAERRDDE >gi|148337420|gb|DS264440.1| GENE 2 729 - 1484 821 251 aa, chain - ## HITS:1 COG:PA2401 KEGG:ns NR:ns ## COG: PA2401 COG1020 # Protein_GI_number: 15597597 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Non-ribosomal peptide synthetase modules and related proteins # Organism: Pseudomonas aeruginosa # 6 244 534 779 819 114 34.0 1e-25 AVLAPRGWQSFVAELAAWRASRPFLPLDPAHPAAHLQAIAVDAGAGALLRQTGFELDLAL PAWDIEASSVDDADDGDEALPDAADVAYLIYTSGSTGAPKGVVIGHDNLAAYVDAAGAVY ALGADDRVLQLASPGFDIAIEESLVSLAHGATVVVAGPQFLAEASGFCAALAAQAISVTS LPTALWNVLAETAQGAQPPACWRLCVLGGESLQPGLLAQWRRHIAHGPQLINTYGPTETT VVASHYRLGDD Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:04 2011 Seq name: gi|148337419|gb|DS264441.1| Bifidobacterium adolescentis L2-32 Scfld0221 genomic scaffold, whole genome shotgun sequence Length of sequence - 1725 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 328 371 ## Psesu_0395 Interferon-induced transmembrane protein 2 1 Op 2 . + CDS 351 - 740 517 ## Psesu_0394 hypothetical protein 3 2 Tu 1 . - CDS 1082 - 1723 605 ## COG1629 Outer membrane receptor proteins, mostly Fe transport Predicted protein(s) >gi|148337419|gb|DS264441.1| GENE 1 2 - 328 371 108 aa, chain + ## HITS:1 COG:no KEGG:Psesu_0395 NR:ns ## KEGG: Psesu_0395 # Name: not_defined # Def: Interferon-induced transmembrane protein # Organism: P.suwonensis # Pathway: not_defined # 3 85 13 92 112 77 53.0 2e-13 MNQPVAAPSPYQTYLPWSITVTVLGACFCCLLGAAPGVVAIVFGSQVNSKFAAGDDAGAR RASENAKLWCWIGTALAALGIVWTIVSFFINGMSFVPNGGLEKLLQGH >gi|148337419|gb|DS264441.1| GENE 2 351 - 740 517 129 aa, chain + ## HITS:1 COG:no KEGG:Psesu_0394 NR:ns ## KEGG: Psesu_0394 # Name: not_defined # Def: hypothetical protein # Organism: P.suwonensis # Pathway: not_defined # 26 129 24 127 137 90 50.0 2e-17 MQAPARHYALAATVAACGAVAAAGAWVLQRVDPNVAGSPLPGCVFYQFTGLYCPGCGMTR ALHALVHGDLAQAVAMNPLLPVLMVALPLLVLHSFGYRLPLPRYALATLLSAKFWLPLLG GFRVLRNLP >gi|148337419|gb|DS264441.1| GENE 3 1082 - 1723 605 213 aa, chain - ## HITS:1 COG:PA2057 KEGG:ns NR:ns ## COG: PA2057 COG1629 # Protein_GI_number: 15597253 # Func_class: P Inorganic ion transport and metabolism # Function: Outer membrane receptor proteins, mostly Fe transport # Organism: Pseudomonas aeruginosa # 24 200 2 167 846 116 42.0 3e-26 VATAAAPAPAPRGPTTTELDTVHVTGSRIGRAAFESSLPLTLITNEQIRASGHQTLFDVL RLMPGMSGHHPRNVATENGASQVPSAAAASASLYSLGPRATLFLVDGRRMANYGLVSTDY GALTDLNGIPLSMVDHIEIAHGGASAIYGADAMAGVVNIILKKDYRGAEVGASYGVSQRG DAEQQRQYASFGEQTPGGGSVFRQRRPLHPAIR Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:10 2011 Seq name: gi|148337418|gb|DS264442.1| Bifidobacterium adolescentis L2-32 Scfld0222 genomic scaffold, whole genome shotgun sequence Length of sequence - 2138 bp Number of predicted genes - 2, with homology - 1 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 13 - 183 185 ## 2 2 Tu 1 . - CDS 1570 - 2085 -222 ## mma_1031 hypothetical protein Predicted protein(s) >gi|148337418|gb|DS264442.1| GENE 1 13 - 183 185 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVIERAVALELGRNEHQYNSSWLEGVRTVKTGQALGRVNAVGVATGGTKAVRLGV >gi|148337418|gb|DS264442.1| GENE 2 1570 - 2085 -222 171 aa, chain - ## HITS:1 COG:no KEGG:mma_1031 NR:ns ## KEGG: mma_1031 # Name: not_defined # Def: hypothetical protein # Organism: M.massiliensis # Pathway: not_defined # 2 168 213 379 383 135 38.0 5e-31 MVNIEMPNAATKVAGSIDNIRRVIFEGRQFTDAYLKIESSFYEIVASLAAIGVSIRHPRV VATIGHIVDKKMAFTRESGAWVQYEHLARWLTYLTSILDIPGTPIQDQVLTATLHSMQTM SRKLLLGYSWKAFEIWQNRWAGITSNNRQAIKAFIEQRTADPDALSVVQTL Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:20 2011 Seq name: gi|148337417|gb|DS264443.1| Bifidobacterium adolescentis L2-32 Scfld0223 genomic scaffold, whole genome shotgun sequence Length of sequence - 2960 bp Number of predicted genes - 4, with homology - 4 Number of transcription units - 2, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 394 355 ## COG4615 ABC-type siderophore export system, fused ATPase and permease components 2 1 Op 2 . + CDS 407 - 1288 745 ## COG2234 Predicted aminopeptidases + Term 1367 - 1408 9.9 - Term 1571 - 1607 3.1 3 2 Op 1 1/0.000 - CDS 1649 - 2167 393 ## COG1835 Predicted acyltransferases 4 2 Op 2 . - CDS 2294 - 2566 254 ## COG1835 Predicted acyltransferases Predicted protein(s) >gi|148337417|gb|DS264443.1| GENE 1 2 - 394 355 130 aa, chain + ## HITS:1 COG:PA2397 KEGG:ns NR:ns ## COG: PA2397 COG4615 # Protein_GI_number: 15597593 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; P Inorganic ion transport and metabolism # Function: ABC-type siderophore export system, fused ATPase and permease components # Organism: Pseudomonas aeruginosa # 4 110 438 544 549 136 57.0 9e-33 IGDERALALLERMELAHKVSVGAGVLSDTRLSQGQRKRLALLLAWAEQRPILLLDEWAAD QDPGFRHFFYEHLLPELRAAGKTIVAVSHDDRYFHLADRVLKLDGGQLAEYDGDTGLAWR TAHARAQALG >gi|148337417|gb|DS264443.1| GENE 2 407 - 1288 745 293 aa, chain + ## HITS:1 COG:CC3337_1 KEGG:ns NR:ns ## COG: CC3337_1 COG2234 # Protein_GI_number: 16127567 # Func_class: R General function prediction only # Function: Predicted aminopeptidases # Organism: Caulobacter vibrioides # 35 272 25 266 400 157 40.0 3e-38 MTTSPSLPSQAGGLARGLALLVLLAFAAASWLDMRPPPARGENAPANEFSAERALRHLPS IASRPHPVGSAENARVRAYLLAQLRGLGLQAQEHSAFVAKPDDWGVIAGRVHNIVARLPG REPGPALALVAHYDSVTTGPGAADNGASVAAILETLRALRAGAPLRNELIVVFADAEEAD LLGAKAFVAQHPWARRIGVALNFYFRVNRGPSMLFEYVAGDGRLVAQFAEYAPHRVGASL GYNLYRHLPNYTDFLVVNRTFIDGLNFTEIDDFTDLPPGYTGSSSCTRTAMFT >gi|148337417|gb|DS264443.1| GENE 3 1649 - 2167 393 172 aa, chain - ## HITS:1 COG:SMa1016 KEGG:ns NR:ns ## COG: SMa1016 COG1835 # Protein_GI_number: 16263003 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Sinorhizobium meliloti # 13 166 198 364 424 83 35.0 2e-16 MRRSSKTALFVAICTAVVLGGVALRAGVWLHDFKTEGPVGESARSWFAEDIYFPTWNRLD GLLAGVVLASLKTFRAQWWRRAQGYANAALLVGLGLLAVAMWLFRARTGLLANAIGWPVL AAGFALLVFAGASRTSWIGRWSIPGMAWLAATSYSLYLVHKGVFHMVDDSVG >gi|148337417|gb|DS264443.1| GENE 4 2294 - 2566 254 90 aa, chain - ## HITS:1 COG:SMa1016 KEGG:ns NR:ns ## COG: SMa1016 COG1835 # Protein_GI_number: 16263003 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Sinorhizobium meliloti # 18 79 71 132 424 70 54.0 7e-13 MLFHSFLNEGPDEGFAWLCHYGWMGVDLFFVLSGYLIGSQVLGPLARGQRLSFGGFYLRR AFRILPAFLAVLAVYLLVPGFRESPGLEPA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:21 2011 Seq name: gi|148337416|gb|DS264444.1| Bifidobacterium adolescentis L2-32 Scfld0224 genomic scaffold, whole genome shotgun sequence Length of sequence - 2487 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 3, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 563 - 832 256 ## gi|154488297|ref|ZP_02029414.1| hypothetical protein BIFADO_01871 + Term 1060 - 1092 0.6 2 2 Tu 1 . - CDS 1275 - 1670 210 ## + Prom 1576 - 1635 1.7 3 3 Tu 1 . + CDS 1693 - 2370 543 ## Sama_0384 hypothetical protein Predicted protein(s) >gi|148337416|gb|DS264444.1| GENE 1 563 - 832 256 89 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488297|ref|ZP_02029414.1| ## NR: gi|154488297|ref|ZP_02029414.1| hypothetical protein BIFADO_01871 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01871 [Bifidobacterium adolescentis L2-32] # 1 89 165 253 253 184 100.0 3e-45 MGSVFRWWKFRFRFNSEPGHTYYLWFERTGQENPRVYGRDLGLNVPVASLPVAPAFGLRS TAELAAEKQARLALREKGTPIEIELLPLE >gi|148337416|gb|DS264444.1| GENE 2 1275 - 1670 210 131 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAPCDVGCAAAGLSIDSATITHSKIVLSLVPRKSCASLSYGEEAPRAAQPHQISIPPEA STLCALTQPVESDSSVATKGPMSSGLPARPSAVCAATIALICGLSRTMPPLKSVSIAPGA RGVGDDAALAS >gi|148337416|gb|DS264444.1| GENE 3 1693 - 2370 543 225 aa, chain + ## HITS:1 COG:no KEGG:Sama_0384 NR:ns ## KEGG: Sama_0384 # Name: not_defined # Def: hypothetical protein # Organism: S.amazonensis # Pathway: not_defined # 1 218 1 219 220 256 61.0 4e-67 MLVRLCVALFFLIGTAHAGAVFTAPPEQAERDRVYVFYLHGRIVEDRGVRPVDTRFGLYD YPAVLDALSSRGAVVISAQRPHETDVDEYAGKTVAQIEALLRAGVPEKNIVVVGFSKGGR IAARVSSFLRRPAVRYVLLAACWDLQKEPQLRLTGRVLAIRETSDELVGESCRSLAERSE RLVSFDELSISTGKSHGAFYLPRPEWVLPVLDWIDGSARFDKDSP Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:40 2011 Seq name: gi|148337415|gb|DS264445.1| Bifidobacterium adolescentis L2-32 Scfld0225 genomic scaffold, whole genome shotgun sequence Length of sequence - 2019 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 1, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 1/0.000 - CDS 2 - 668 592 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 796 - 855 80.3 2 1 Op 2 . - CDS 1018 - 2019 1132 ## COG1479 Uncharacterized conserved protein Predicted protein(s) >gi|148337415|gb|DS264445.1| GENE 1 2 - 668 592 222 aa, chain - ## HITS:1 COG:BMEII0449 KEGG:ns NR:ns ## COG: BMEII0449 COG0610 # Protein_GI_number: 17988794 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Brucella melitensis # 11 219 241 448 783 153 42.0 2e-37 MEDLDHGAGAPNDQQRLVAGMLDRQNLLDLIRTFTLFSTNDSGQAIKIVGRYQQFRAVKL AVKRLLEGNTPRQRSGIIWHTQGSGKSLTMMFMVRELYRHSRLAHWKVVFVTDRTQLETQ LTETSQAIGFTVKVADSIRKLKEMLASTSSDLVMAMIHKFRDADLEASFPELNTSPHILV LTDEAHRSQYRLLGANLDRAIPNAARIGYTGTPIDKTERVFG >gi|148337415|gb|DS264445.1| GENE 2 1018 - 2019 1132 333 aa, chain - ## HITS:1 COG:Z5943m_1 KEGG:ns NR:ns ## COG: Z5943m_1 COG1479 # Protein_GI_number: 15804980 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Escherichia coli O157:H7 EDL933 # 2 332 15 352 592 339 52.0 3e-93 GAKQFIIPIFQSTYSWEIGHCEQLWNDILRAGSHAELDSHFIGSAVYIPEQETSAAISRW LVIDGQQRITTLTLLLLALKRRLEKDARDTPVSAAEIEDYFLLNRYGKGEQRYKMLLTKT DKDTLIALLDGKPVPDKASHRIKENFEFFAGKIAEADLEVVYAGIGKLMIVDVRLQQGID NPQMIFESMNSTGKALTQADLIRNYVLMGLPHEQQTRLYEDYWRPMELLFGVEHYNKHFD EFMRFFLVIHTGNHRIRKDDVYNEFKIYSRGHDDEPLLAALLEFARHYCCMALGSEKDSE LAIAFQDIRELRADVCYPMLMEIYHDYTQGRLG Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:41 2011 Seq name: gi|148337413|gb|DS264446.1| Bifidobacterium adolescentis L2-32 Scfld0226 genomic scaffold, whole genome shotgun sequence Length of sequence - 2113 bp Number of predicted genes - 3, with homology - 2 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 1 - 799 190 ## Reut_C6151 hypothetical protein 2 1 Op 2 . - CDS 891 - 1202 216 ## cpfrc_01466 hypothetical protein - Prom 1251 - 1310 80.3 + Prom 1685 - 1744 2.2 3 2 Tu 1 . + CDS 1870 - 2025 59 ## Predicted protein(s) >gi|148337413|gb|DS264446.1| GENE 1 1 - 799 190 266 aa, chain - ## HITS:1 COG:no KEGG:Reut_C6151 NR:ns ## KEGG: Reut_C6151 # Name: not_defined # Def: hypothetical protein # Organism: R.eutropha # Pathway: not_defined # 41 266 2 227 284 308 64.0 2e-82 MTYTGLNQHELRQRLSNYAGGHLNIEVLGWFSFLLRDFARPFLRYKFVDKRVNGFIFEGG PNRMAVGAARFLSKSDAVYRAELGRLAFELIGETGGALIRRLEGVYDEILIDEVQDLSGY DWEILDALLESDIEIRMVGDIRQSVLSTYPRGTKNRKYAYAEAIKWFRKHETAGRLTIAE SVETWRCHQTIATFSDSIFDRSWGFPATKSLNERATGHDGVFLVRSEHVQTYVAQFQPQC LRYNANCGKAFTLDYMNFRVAKGATL >gi|148337413|gb|DS264446.1| GENE 2 891 - 1202 216 103 aa, chain - ## HITS:1 COG:no KEGG:cpfrc_01466 NR:ns ## KEGG: cpfrc_01466 # Name: not_defined # Def: hypothetical protein # Organism: C.pseudotuberculosis # Pathway: not_defined # 4 94 438 528 543 65 39.0 8e-10 MAVLRDNDGHAQEDLRAPVAQWLADGRRELFIGGLEEGATLEPQLIAHNGEVVLRKVLGI TPAADLSTWMTREKTEGALRIASSKTKLIAPAYMSAAATFIHG >gi|148337413|gb|DS264446.1| GENE 3 1870 - 2025 59 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFSPSRKHPRAQYDLHMYHNADELFDSAAFFLSIFLEQDLLRQDLKPLYRF Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:53 2011 Seq name: gi|148337412|gb|DS264447.1| Bifidobacterium adolescentis L2-32 Scfld0227 genomic scaffold, whole genome shotgun sequence Length of sequence - 1929 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 2 - 761 993 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases - Prom 953 - 1012 80.3 2 2 Tu 1 . - CDS 1129 - 1929 997 ## COG1297 Predicted membrane protein Predicted protein(s) >gi|148337412|gb|DS264447.1| GENE 1 2 - 761 993 253 aa, chain - ## HITS:1 COG:XF2260 KEGG:ns NR:ns ## COG: XF2260 COG1506 # Protein_GI_number: 15838851 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Xylella fastidiosa 9a5c # 2 253 361 613 709 399 74.0 1e-111 MLSADGKTIYTTTEDLGQQPLFGVDIASGKATRLIADGTVNSPTLAGKTFAFTRNTLKSG DQIFVGGLDGAPERAITPSASEILPGVKFGDFEQFEFKGWNGDSVYGYVVKPWNYQEGKK YPVAFLIHGGPQGSFGNGWSYRWNPQTYAGQGYAVVMIDFHGSTGYGQAFTDAISQHWGD RPLEDLQKGWAAAQKKYSFLDGDKACALGASYGGFMVNWIAGNWNQPWKCLVSHDGVFDQ RMMGYATEELWFT >gi|148337412|gb|DS264447.1| GENE 2 1129 - 1929 997 266 aa, chain - ## HITS:1 COG:XF2261 KEGG:ns NR:ns ## COG: XF2261 COG1297 # Protein_GI_number: 15838852 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Xylella fastidiosa 9a5c # 1 264 222 493 653 349 73.0 4e-96 GSILSWQFAIPIYHMFFLDSDPVLAAKIAGASAADVGGAIWSAKVRYLGVGTMLIGGVWT LFSLRKSLLSGVKSGLAAARKSAAVGEVAETDRDLPMKWMLVALVGFVLPLLLLYQAIVG NWFVSVPMTIIMIVAGFLFVSVSAYLAGLIGSSNNPVSGITISTILFASAVLVLMLGRDS PIGAVAAIMIGAVVCCAAAVGGDNLQDLKAGYIVGATPWKQQLMLGIGAFSCALIMAPVL NLLAAAYGIGAPTPEHPNSLAAPHPH Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:54 2011 Seq name: gi|148337411|gb|DS264448.1| Bifidobacterium adolescentis L2-32 Scfld0228 genomic scaffold, whole genome shotgun sequence Length of sequence - 1851 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 357 - 839 322 ## COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) - Term 1070 - 1105 5.0 2 2 Tu 1 . - CDS 1127 - 1795 566 ## Pfl01_4299 hypothetical protein Predicted protein(s) >gi|148337411|gb|DS264448.1| GENE 1 357 - 839 322 160 aa, chain + ## HITS:1 COG:XF1956 KEGG:ns NR:ns ## COG: XF1956 COG0189 # Protein_GI_number: 15838550 # Func_class: H Coenzyme transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) # Organism: Xylella fastidiosa 9a5c # 21 151 1 136 314 167 57.0 7e-42 MTDTGDLPATIPSIFEDSVAMPLDIVVVMDPIGSIKIAKDSTFAMLLEAQRRGHRLWYVA PGGLSLDGGSARAKVAPVRVRDDKNGWFELGDWSQIELGSAHVILMRKDPPVDAEYLHDT QILSVAQRAGAFVVNDPQACATTTRSSPRCCSRSAASTPW >gi|148337411|gb|DS264448.1| GENE 2 1127 - 1795 566 222 aa, chain - ## HITS:1 COG:no KEGG:Pfl01_4299 NR:ns ## KEGG: Pfl01_4299 # Name: not_defined # Def: hypothetical protein # Organism: P.fluorescens_PfO1 # Pathway: not_defined # 1 201 167 376 398 197 49.0 3e-49 MQWWREPRTGMELFTVESGVDQPARGRVNAILKQRLWRSAVDALQCTSAPESDFDQTVTP RLLDRRFLSLSLMTSYYCGGAHPDFGDSPLTIDVRSGRELALEDVLWLGKGAPPRSAGRG DYDSPGYKRLSEYRQSTLVPWTIKTLTRLHPAEMAKPKDEEGCDYSDPDVWGTSIWYLTA EGLYLGPYFARVARACEYPEWFAGAGKPGLGASRSGVEVSPR Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:31:59 2011 Seq name: gi|148337410|gb|DS264449.1| Bifidobacterium adolescentis L2-32 Scfld0229 genomic scaffold, whole genome shotgun sequence Length of sequence - 1831 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 2, operones - 1 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 184 - 753 780 ## COG1082 Sugar phosphate isomerases/epimerases - Term 821 - 859 1.7 2 2 Op 1 . - CDS 981 - 1460 575 ## Smlt1190 putative transmembrane protein 3 2 Op 2 . - CDS 1460 - 1831 480 ## COG2303 Choline dehydrogenase and related flavoproteins Predicted protein(s) >gi|148337410|gb|DS264449.1| GENE 1 184 - 753 780 189 aa, chain + ## HITS:1 COG:AGl982 KEGG:ns NR:ns ## COG: AGl982 COG1082 # Protein_GI_number: 15890607 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar phosphate isomerases/epimerases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 6 189 9 190 284 183 53.0 2e-46 MTIAIARSLAAAALLFLTATPAFAQQAKSQLRPIAVQMYTLRNVASLEQQLKIVHDAGIR AVETVGTQDVSAKTLKQLLDKYSIKAISTHAQLANLRSDLDGVVAFNKAIGNTTLVVPYL TQEERPTDAAGWTALGKELGKISKKVRAKGMTLAYHNHDFEIVDFGGKTGLELMFEGAGP QLQAELDLA >gi|148337410|gb|DS264449.1| GENE 2 981 - 1460 575 159 aa, chain - ## HITS:1 COG:no KEGG:Smlt1190 NR:ns ## KEGG: Smlt1190 # Name: not_defined # Def: putative transmembrane protein # Organism: S.maltophilia # Pathway: not_defined # 1 159 1 158 191 189 66.0 3e-47 MERRELLKMIAAATGAAMIGVPAFVFGQAPVPSGSSTFSEVDVAKLDEIADTILPRTKTP GAKDAGTGLFMATFVSDCYTPEYQAIFRAGLADLDQRAGGRFVSLSAQARTELLRALDAE AGRRINSMAIATGGDNPKALKPHYFTMIKQLVLFGFFTS >gi|148337410|gb|DS264449.1| GENE 3 1460 - 1831 480 123 aa, chain - ## HITS:1 COG:AGl980 KEGG:ns NR:ns ## COG: AGl980 COG2303 # Protein_GI_number: 15890606 # Func_class: E Amino acid transport and metabolism # Function: Choline dehydrogenase and related flavoproteins # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 123 439 561 561 192 73.0 1e-49 DKWGLPVLAMDVSLRKNELAMRKDMGADAAEMLEAAGVKNVKVHENDYAPGMAIHEMGTA RMGRDRKHSVLNLHNQVWDAPNVYVTDGACMTSSACVNPSLTYMALTARAADHAVRELKA GNL Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:32:03 2011 Seq name: gi|148337409|gb|DS264450.1| Bifidobacterium adolescentis L2-32 Scfld0230 genomic scaffold, whole genome shotgun sequence Length of sequence - 2009 bp Number of predicted genes - 4, with homology - 3 Number of transcription units - 4, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 1 - 385 379 ## COG0500 SAM-dependent methyltransferases 2 2 Tu 1 . + CDS 559 - 951 415 ## Tmz1t_1567 ABC transporter related + Prom 953 - 1012 80.3 3 3 Tu 1 . + CDS 1083 - 1190 116 ## 4 4 Tu 1 . - CDS 1306 - 2001 689 ## Caul_0237 sulfatase Predicted protein(s) >gi|148337409|gb|DS264450.1| GENE 1 1 - 385 379 128 aa, chain - ## HITS:1 COG:all2121 KEGG:ns NR:ns ## COG: all2121 COG0500 # Protein_GI_number: 17229613 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Nostoc sp. PCC 7120 # 2 126 31 159 330 63 32.0 7e-11 MSQRAMIDGYDAAMQGAVIEAYYGSSDFYNFGFWSDATQNQSQASEDLVARLLEFIPPAD RGGRILDVACGLGASSRHLLRHFAASQIVGINVSELQLERARHNAPGCEFRVMDATRLDF PDASFDNI >gi|148337409|gb|DS264450.1| GENE 2 559 - 951 415 130 aa, chain + ## HITS:1 COG:no KEGG:Tmz1t_1567 NR:ns ## KEGG: Tmz1t_1567 # Name: not_defined # Def: ABC transporter related # Organism: Thauera # Pathway: not_defined # 18 127 33 142 653 104 53.0 1e-21 MDSDDAKPGIHRAPVLQLYRELWFQAKGHRTALLGSMLLLVGAQVVLLAVPYLVGKSLNV LQARGNDGAGEAAFWLAAVLGATIVSWLIHGPGRILERNVALAVRQRVATALTQRLLAFP LSWHDRNIPS >gi|148337409|gb|DS264450.1| GENE 3 1083 - 1190 116 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLAQTSVDYANLRAASLRQNDAEETAVEMAAEDAG >gi|148337409|gb|DS264450.1| GENE 4 1306 - 2001 689 231 aa, chain - ## HITS:1 COG:no KEGG:Caul_0237 NR:ns ## KEGG: Caul_0237 # Name: not_defined # Def: sulfatase # Organism: Caulobacter_K31 # Pathway: not_defined # 14 224 468 670 674 180 47.0 5e-44 MIQSARLNPNADMRQIDALTSHVDIVPTLLGLAGVDADELARIGADLRTTRPVPPFPGVD LSPVIRGEAAEPREPDGRVREGVLFVTDDEITERLSGPPDPHELHADREYRIYLDMVDAV RDGSSVLPHNGPVPQLTPGPVRQPNHVRCVRSGAWKLVRYWDPHGVETDQWELYDLDRDG CEIDNLLVTGARFPTPVADLPEGYTQAGIVETAERLHRLLQRYELEMLSNP Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:32:16 2011 Seq name: gi|148337408|gb|DS264451.1| Bifidobacterium adolescentis L2-32 Scfld0231 genomic scaffold, whole genome shotgun sequence Length of sequence - 2016 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - TRNA 211 - 286 82.0 # Met CAT 0 0 1 1 Tu 1 . + CDS 831 - 1043 214 ## gi|154488585|ref|ZP_02029434.1| hypothetical protein BIFADO_01892 2 2 Tu 1 . - CDS 1230 - 2015 843 ## COG3537 Putative alpha-1,2-mannosidase Predicted protein(s) >gi|148337408|gb|DS264451.1| GENE 1 831 - 1043 214 70 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488585|ref|ZP_02029434.1| ## NR: gi|154488585|ref|ZP_02029434.1| hypothetical protein BIFADO_01892 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01892 [Bifidobacterium adolescentis L2-32] # 1 70 1 70 70 108 100.0 2e-22 MTLNRLDSISAAMQSNTSSAMKTGYNRVLPDNRGSHNLRASGAGDSCKGLRAASRTAGRA LEQPWGLGRI >gi|148337408|gb|DS264451.1| GENE 2 1230 - 2015 843 261 aa, chain - ## HITS:1 COG:XF0842 KEGG:ns NR:ns ## COG: XF0842 COG3537 # Protein_GI_number: 15837444 # Func_class: G Carbohydrate transport and metabolism # Function: Putative alpha-1,2-mannosidase # Organism: Xylella fastidiosa 9a5c # 1 242 445 688 790 187 42.0 2e-47 DAYKKGIRGYDANEALEAMVASADYGPYDGIAQYKELGYVPIDEEGEAASKTLEYAFDDW TIARMAGAMGRKDVAARFEKRASNWKHAFDEKTGFMRARKRDGSFREPFDPSASGYGTDY TEGNAWQYSWYVPQDVAGLAAAHGGADKLIARLDQVFEAKVDPKIFAHMEDITGLIGWYA HGNEPSHHVAYLYGYAGQPWRTQERLKQIMASQYAPRPDGLAATTTSGQMSAWYVFTALG SYPGGAGPLTIHHQAPGSCLN Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:32:22 2011 Seq name: gi|148337407|gb|DS264452.1| Bifidobacterium adolescentis L2-32 Scfld0232 genomic scaffold, whole genome shotgun sequence Length of sequence - 2088 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 3 - 722 163 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 - Prom 790 - 849 80.3 2 2 Tu 1 . - CDS 864 - 2084 1426 ## Acid345_1285 ABC efflux pump, inner membrane subunit Predicted protein(s) >gi|148337407|gb|DS264452.1| GENE 1 3 - 722 163 240 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 57 240 61 231 242 67 27 9e-12 MLLFVKAADLVLIDVSGDIDGVPYPLANASQLACSEALCREEGASVLAEFADVRRMDQIG RVVDKALARYGRIDILLNNAGIAAPSGKVVHEISEDEWNLMVDVDLNGAWRMIKAVGKIM TSQRAGSIVNIASTAGTVGYRNFSGYVAAKHGVVGLTKAAALDYGPVKVRVNAICPGSVR DAEHVEGRMLSEIARSLEVDVAEHESVFVQSQPMNELIEPADIADAAVWLGSDAARRVTG >gi|148337407|gb|DS264452.1| GENE 2 864 - 2084 1426 406 aa, chain - ## HITS:1 COG:no KEGG:Acid345_1285 NR:ns ## KEGG: Acid345_1285 # Name: not_defined # Def: ABC efflux pump, inner membrane subunit # Organism: A.bacterium # Pathway: not_defined # 13 355 513 862 913 111 25.0 5e-23 MLDYRRLAGPHKASGKGSGLQVSSPIRNFLVISQIALAAFLLVAIASVLKLSYATVTRDP GFRVDDLVFANLSIGSMNPNRDERLRYIDEITEKLKQLPQVKQVSSALFVPMMSNRWTSS LKLDAAGSQTVSVATNLIDDTYLGVMSEEIMRGNNFSREDVNYSAKKVLVNEELAKKISP DGDVIGKQVYWQSDGQQEFKPHQIIGVVRDVAIPRTPPTPRMYATRFSGLRFIVELTPGS TLSRQEFLGVLSSVHKQFNLYEYERVRDIYDGLVLKDLFIVWVAIGLGVLTVLLASIGIY GVLNYGILLRRYELGVRMSIGAGPARIAGMIYQENLILFAYGALASLVILIVSDRLLAKY AGYELPLSLSAGVAGYAVIVVSVATACFLTLRAIVTRWPIFALRTD Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:32:29 2011 Seq name: gi|148337406|gb|DS264453.1| Bifidobacterium adolescentis L2-32 Scfld0233 genomic scaffold, whole genome shotgun sequence Length of sequence - 2250 bp Number of predicted genes - 2, with homology - 2 Number of transcription units - 2, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + Prom 298 - 357 3.8 1 1 Tu 1 . + CDS 395 - 685 71 ## gi|154498846|ref|ZP_02037224.1| hypothetical protein BACCAP_02838 + Prom 1061 - 1120 3.4 2 2 Tu 1 . + CDS 1146 - 1805 368 ## COG4845 Chloramphenicol O-acetyltransferase + Term 1809 - 1848 2.1 Predicted protein(s) >gi|148337406|gb|DS264453.1| GENE 1 395 - 685 71 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154498846|ref|ZP_02037224.1| ## NR: gi|154498846|ref|ZP_02037224.1| hypothetical protein BACCAP_02838 [Bacteroides capillosus ATCC 29799] hypothetical protein CRE_01315 [Caenorhabditis remanei] hypothetical protein BACCAP_02838 [Bacteroides capillosus ATCC 29799] hypothetical protein CRE_01315 [Caenorhabditis remanei] # 1 96 1 96 96 174 100.0 2e-42 MSGLFFVIQRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKY CSSSVAVVRPPLQELCSTAYIPRSANPVTSGCCQWR >gi|148337406|gb|DS264453.1| GENE 2 1146 - 1805 368 219 aa, chain + ## HITS:1 COG:DR2303 KEGG:ns NR:ns ## COG: DR2303 COG4845 # Protein_GI_number: 15807294 # Func_class: V Defense mechanisms # Function: Chloramphenicol O-acetyltransferase # Organism: Deinococcus radiodurans # 14 208 34 222 228 142 37.0 4e-34 MEKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFI HILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIY SQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQG DKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGGA Prediction of potential genes in microbial genomes Time: Tue Jun 28 02:44:34 2011 Seq name: gi|148337405|gb|DS264454.1| Bifidobacterium adolescentis L2-32 Scfld0234 genomic scaffold, whole genome shotgun sequence Length of sequence - 994221 bp Number of predicted genes - 928, with homology - 876 Number of transcription units - 489, operones - 201 average op.length - 3.2 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 126 - 365 224 ## 2 1 Op 2 . - CDS 442 - 693 400 ## gi|154486233|ref|ZP_02027640.1| hypothetical protein BIFADO_00036 3 1 Op 3 . - CDS 690 - 899 112 ## gi|154486234|ref|ZP_02027641.1| hypothetical protein BIFADO_00037 4 1 Op 4 . - CDS 896 - 1099 243 ## gi|154486235|ref|ZP_02027642.1| hypothetical protein BIFADO_00038 5 1 Op 5 . - CDS 1099 - 1479 397 ## HMPREF0424_0972 hypothetical protein - Prom 1714 - 1773 1.7 - Term 1618 - 1657 -1.0 6 2 Op 1 . - CDS 1824 - 2180 184 ## COG0270 Site-specific DNA methylase 7 2 Op 2 . - CDS 2180 - 2299 68 ## 8 2 Op 3 . - CDS 2256 - 2678 209 ## Blon_1526 DNA-cytosine methyltransferase (EC:2.1.1.37) 9 2 Op 4 . - CDS 2705 - 3346 199 ## COG0270 Site-specific DNA methylase 10 2 Op 5 . - CDS 3346 - 4143 395 ## BLIF_0859 hypothetical protein 11 3 Tu 1 . + CDS 4162 - 4455 140 ## 12 4 Op 1 . - CDS 4306 - 4662 142 ## gi|154486244|ref|ZP_02027651.1| hypothetical protein BIFADO_00047 13 4 Op 2 . - CDS 4659 - 5114 395 ## gi|154486245|ref|ZP_02027652.1| hypothetical protein BIFADO_00048 14 4 Op 3 . - CDS 5086 - 5607 366 ## BLIF_1041 hypothetical protein 15 4 Op 4 . - CDS 5595 - 5738 89 ## 16 4 Op 5 . - CDS 5738 - 6616 962 ## COG0863 DNA modification methylase 17 4 Op 6 . - CDS 6616 - 7935 1073 ## Dred_1192 helicase domain-containing protein 18 4 Op 7 . - CDS 7957 - 8502 606 ## COG0629 Single-stranded DNA-binding protein 19 4 Op 8 . - CDS 8502 - 9068 544 ## Blon_1503 hypothetical protein 20 4 Op 9 . - CDS 9056 - 9883 995 ## Blon_1502 hypothetical protein 21 4 Op 10 . - CDS 9904 - 10293 422 ## gi|154486252|ref|ZP_02027659.1| hypothetical protein BIFADO_00055 22 5 Tu 1 . - CDS 10464 - 10727 147 ## - Prom 10757 - 10816 2.1 23 6 Op 1 . - CDS 10997 - 11227 306 ## BBPR_0888 hypothetical protein 24 6 Op 2 . - CDS 11220 - 11579 315 ## gi|154486254|ref|ZP_02027661.1| hypothetical protein BIFADO_00057 25 6 Op 3 . - CDS 11572 - 11934 268 ## gi|154486255|ref|ZP_02027662.1| hypothetical protein BIFADO_00058 26 6 Op 4 . - CDS 11931 - 12137 202 ## gi|154486256|ref|ZP_02027663.1| hypothetical protein BIFADO_00059 27 6 Op 5 . - CDS 12147 - 12350 137 ## gi|154486257|ref|ZP_02027664.1| hypothetical protein BIFADO_00060 28 6 Op 6 . - CDS 12347 - 13138 607 ## COG3617 Prophage antirepressor 29 6 Op 7 . - CDS 13149 - 13706 552 ## BLIF_0855 phage protein 30 6 Op 8 . - CDS 13744 - 13968 309 ## gi|154486260|ref|ZP_02027667.1| hypothetical protein BIFADO_00063 - Prom 14012 - 14071 4.7 + Prom 13971 - 14030 3.9 31 7 Op 1 . + CDS 14107 - 14511 532 ## gi|154486261|ref|ZP_02027668.1| hypothetical protein BIFADO_00064 32 7 Op 2 . + CDS 14578 - 14988 302 ## BBPR_0878 hypothetical protein 33 7 Op 3 . + CDS 15055 - 15417 380 ## gi|154486263|ref|ZP_02027670.1| hypothetical protein BIFADO_00066 + Term 15435 - 15470 3.2 34 8 Tu 1 . + CDS 15773 - 16249 445 ## gi|154486264|ref|ZP_02027671.1| hypothetical protein BIFADO_00067 + Term 16439 - 16485 12.3 35 9 Tu 1 . - CDS 16377 - 16499 98 ## - Prom 16553 - 16612 1.9 - TRNA 16796 - 16871 89.3 # Asn GTT 0 0 - Term 16898 - 16929 -0.7 36 10 Op 1 9/0.000 - CDS 16960 - 18009 674 ## PROTEIN SUPPORTED gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 37 10 Op 2 20/0.000 - CDS 18000 - 18542 346 ## COG0456 Acetyltransferases 38 10 Op 3 12/0.000 - CDS 18553 - 19323 717 ## COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone 39 10 Op 4 . - CDS 19428 - 20000 686 ## COG0802 Predicted ATPase or kinase 40 10 Op 5 10/0.000 - CDS 19997 - 21016 1074 ## COG1466 DNA polymerase III, delta subunit 41 10 Op 6 7/0.000 - CDS 21020 - 22597 942 ## COG0658 Predicted membrane metal-binding protein 42 10 Op 7 . - CDS 22729 - 23385 379 ## COG1555 DNA uptake protein and related DNA-binding proteins - Term 23470 - 23520 13.6 43 11 Op 1 . - CDS 23636 - 26608 4556 ## COG0495 Leucyl-tRNA synthetase 44 11 Op 2 . - CDS 26681 - 27562 1023 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 45 11 Op 3 . - CDS 27571 - 28512 1266 ## COG0598 Mg2+ and Co2+ transporters - Prom 28652 - 28711 2.0 46 12 Tu 1 . - CDS 28735 - 29571 889 ## COG0406 Fructose-2,6-bisphosphatase - Prom 29769 - 29828 4.6 - TRNA 29675 - 29750 81.2 # Ala GGC 0 0 - Term 29629 - 29672 9.2 47 13 Tu 1 . - CDS 29860 - 30963 848 ## BAD_0868 hypothetical protein - Term 31019 - 31055 -0.3 48 14 Tu 1 . - CDS 31071 - 31802 831 ## COG0406 Fructose-2,6-bisphosphatase 49 15 Tu 1 . + CDS 31678 - 31935 64 ## gi|154486279|ref|ZP_02027686.1| hypothetical protein BIFADO_00084 - Term 31876 - 31919 6.4 50 16 Op 1 . - CDS 31940 - 32362 652 ## COG0799 Uncharacterized homolog of plant Iojap protein 51 16 Op 2 . - CDS 32350 - 33732 1878 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 33797 - 33856 2.2 52 17 Tu 1 . - CDS 33867 - 34406 360 ## COG3663 G:T/U mismatch-specific DNA glycosylase - Prom 34443 - 34502 2.1 + Prom 34442 - 34501 1.6 53 18 Tu 1 . + CDS 34537 - 35544 1294 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 35605 - 35666 19.7 - Term 35598 - 35649 21.1 54 19 Op 1 . - CDS 35678 - 36379 1097 ## COG0819 Putative transcription activator 55 19 Op 2 . - CDS 36459 - 37073 856 ## COG4721 Predicted membrane protein - Term 37268 - 37336 28.7 56 20 Op 1 . - CDS 37361 - 37921 783 ## HMPREF0424_0292 isochorismatase family protein (EC:3.-.-.-) 57 20 Op 2 . - CDS 37955 - 39427 2303 ## COG1457 Purine-cytosine permease and related proteins - Term 39460 - 39516 1.5 58 21 Op 1 5/0.018 - CDS 39554 - 40507 599 ## COG0524 Sugar kinases, ribokinase family 59 21 Op 2 2/0.079 - CDS 40511 - 41539 1213 ## COG1397 ADP-ribosylglycohydrolase 60 21 Op 3 . - CDS 41526 - 42164 637 ## COG2188 Transcriptional regulators - Prom 42292 - 42351 1.7 61 22 Tu 1 . + CDS 42543 - 43328 269 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 + Term 43471 - 43524 16.7 - Term 43463 - 43507 7.8 62 23 Op 1 . - CDS 43638 - 44243 752 ## COG1335 Amidases related to nicotinamidase 63 23 Op 2 . - CDS 44322 - 44540 310 ## gi|154486295|ref|ZP_02027702.1| hypothetical protein BIFADO_00100 - Prom 44625 - 44684 2.4 64 24 Tu 1 . - CDS 44804 - 45859 699 ## BAD_0884 putative integral membrane protein + Prom 45818 - 45877 2.0 65 25 Tu 1 . + CDS 46018 - 46449 343 ## BAD_0885 hypothetical protein + Term 46532 - 46570 5.1 + TRNA 46560 - 46633 49.5 # Gln TTG 0 0 + Prom 46561 - 46620 78.9 66 26 Tu 1 . + CDS 46642 - 46782 193 ## + Term 46995 - 47048 1.0 - Term 46742 - 46769 -0.8 67 27 Op 1 . - CDS 46906 - 47457 298 ## Lbys_2559 hypothetical protein 68 27 Op 2 . - CDS 47467 - 47913 431 ## ML5_3693 DNA binding domain protein, excisionase family - Prom 47933 - 47992 2.0 + Prom 48305 - 48364 6.2 69 28 Op 1 . + CDS 48416 - 48754 246 ## gi|154486302|ref|ZP_02027709.1| hypothetical protein BIFADO_00108 70 28 Op 2 . + CDS 48768 - 48950 98 ## + Prom 49136 - 49195 4.9 71 29 Tu 1 . + CDS 49356 - 49478 221 ## gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 + Term 49506 - 49556 18.0 72 30 Tu 1 . - CDS 49468 - 49662 82 ## 73 31 Tu 1 . + CDS 50082 - 50252 86 ## Blon_0040 transposase, mutator type 74 32 Op 1 10/0.000 + CDS 50359 - 51726 989 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 75 32 Op 2 36/0.000 + CDS 51723 - 52946 831 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 76 32 Op 3 . + CDS 52959 - 53594 199 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 77 33 Tu 1 . + CDS 53827 - 54123 160 ## gi|154486312|ref|ZP_02027719.1| hypothetical protein BIFADO_00118 78 34 Tu 1 . + CDS 54639 - 54866 167 ## - 5S_RRNA 54668 - 54784 100.0 # AP009256 [R:1549800..1549916] # 5S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 55134 - 58054 98.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - Term 58142 - 58197 6.4 79 35 Tu 1 . - CDS 58306 - 58500 86 ## gi|154486318|ref|ZP_02027725.1| hypothetical protein BIFADO_00125 - Prom 58535 - 58594 80.4 - SSU_RRNA 58518 - 60047 99.0 # AP009256 [R:1909939..1911469] # 16S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - Term 60247 - 60280 -0.5 80 36 Tu 1 . - CDS 60312 - 60506 126 ## gi|154486320|ref|ZP_02027727.1| hypothetical protein BIFADO_00128 - Term 60546 - 60592 4.1 81 37 Tu 1 . - CDS 60709 - 63684 4520 ## COG1472 Beta-glucosidase-related glycosidases + Prom 63677 - 63736 2.3 82 38 Op 1 . + CDS 63936 - 65963 1744 ## COG0515 Serine/threonine protein kinase 83 38 Op 2 . + CDS 66020 - 67003 1429 ## COG1651 Protein-disulfide isomerase + Term 67053 - 67094 1.2 + TRNA 67116 - 67192 77.6 # Thr TGT 0 0 + Prom 67118 - 67177 79.0 84 39 Op 1 . + CDS 67199 - 67438 225 ## 85 39 Op 2 4/0.018 + CDS 67471 - 69006 2048 ## COG3583 Uncharacterized protein conserved in bacteria 86 39 Op 3 6/0.000 + CDS 69058 - 69984 1362 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 87 39 Op 4 . + CDS 69981 - 70907 976 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 88 39 Op 5 . + CDS 70969 - 71601 927 ## BAD_1617 hypothetical protein + Term 71637 - 71676 5.0 - Term 71619 - 71669 13.2 89 40 Tu 1 . - CDS 71732 - 73108 1649 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 73180 - 73239 2.4 90 41 Tu 1 . + CDS 73235 - 73912 618 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 73943 - 73971 0.5 91 42 Tu 1 . - CDS 73920 - 74189 149 ## gi|154486332|ref|ZP_02027739.1| hypothetical protein BIFADO_00141 + Prom 73914 - 73973 1.9 92 43 Op 1 . + CDS 74071 - 76035 2072 ## BAD_1620 hypothetical protein 93 43 Op 2 . + CDS 76032 - 77771 2054 ## COG0728 Uncharacterized membrane protein, putative virulence factor 94 43 Op 3 . + CDS 77812 - 79839 1909 ## BAD_1622 hypothetical protein + Term 79850 - 79902 16.2 + Prom 79873 - 79932 1.9 95 44 Tu 1 . + CDS 80000 - 80941 752 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 + Term 80972 - 81002 1.0 96 45 Op 1 25/0.000 - CDS 80996 - 82282 1311 ## COG1475 Predicted transcriptional regulators 97 45 Op 2 15/0.000 - CDS 82285 - 83265 1174 ## COG1192 ATPases involved in chromosome partitioning - Prom 83392 - 83451 1.9 - Term 83349 - 83392 0.4 98 45 Op 3 3/0.026 - CDS 83508 - 84242 602 ## COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division - Term 84260 - 84300 10.4 99 45 Op 4 16/0.000 - CDS 84321 - 84848 671 ## COG1847 Predicted RNA-binding protein - Prom 84910 - 84969 2.9 - Term 84934 - 84986 19.0 100 46 Op 1 18/0.000 - CDS 84993 - 86027 1453 ## COG0706 Preprotein translocase subunit YidC 101 46 Op 2 . - CDS 86027 - 86359 82 ## COG0759 Uncharacterized conserved protein 102 46 Op 3 . - CDS 86356 - 86721 231 ## BAD_1630 ribonuclease P protein component 103 46 Op 4 . - CDS 86742 - 86924 308 ## PROTEIN SUPPORTED gi|119026649|ref|YP_910494.1| 50S ribosomal protein L34 - Prom 87062 - 87121 3.6 104 47 Tu 1 . + CDS 87155 - 88693 2052 ## COG0593 ATPase involved in DNA replication initiation + Term 88739 - 88773 6.2 + Prom 89015 - 89074 3.2 105 48 Op 1 18/0.000 + CDS 89189 - 90313 1599 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 106 48 Op 2 5/0.018 + CDS 90392 - 91603 1092 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 107 48 Op 3 5/0.018 + CDS 91603 - 92088 461 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives + Prom 92238 - 92297 3.3 108 49 Op 1 24/0.000 + CDS 92399 - 94507 3138 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 109 49 Op 2 . + CDS 94549 - 97263 3526 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 110 49 Op 3 . + CDS 97338 - 97874 828 ## BAD_0007 hypothetical protein + Term 97936 - 97985 15.1 - Term 98044 - 98084 11.2 111 50 Tu 1 . - CDS 98108 - 99454 2046 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase 112 51 Op 1 . + CDS 99329 - 99619 104 ## gi|171741726|ref|ZP_02917533.1| hypothetical protein BIFDEN_00817 113 51 Op 2 . + CDS 99659 - 100102 662 ## COG1970 Large-conductance mechanosensitive channel 114 51 Op 3 . + CDS 100137 - 100349 130 ## + Term 100427 - 100451 -0.3 - TRNA 100267 - 100339 80.6 # Ala GGC 0 0 - TRNA 100341 - 100413 89.3 # Ala TGC 0 0 - TRNA 100456 - 100529 89.9 # Ile GAT 0 0 115 52 Tu 1 . + CDS 100630 - 101349 699 ## COG1451 Predicted metal-dependent hydrolase 116 53 Op 1 . - CDS 101363 - 102703 1846 ## COG1253 Hemolysins and related proteins containing CBS domains 117 53 Op 2 . - CDS 102781 - 103476 699 ## COG0288 Carbonic anhydrase - Prom 103705 - 103764 3.1 118 54 Tu 1 . + CDS 103562 - 103738 88 ## gi|154486360|ref|ZP_02027767.1| hypothetical protein BIFADO_00172 - Term 103737 - 103780 8.3 119 55 Tu 1 . - CDS 103861 - 104061 115 ## - Prom 104105 - 104164 7.0 120 56 Tu 1 . - CDS 104313 - 104780 260 ## BAD_0021 hypothetical protein 121 57 Tu 1 . - CDS 104951 - 107707 4085 ## COG2352 Phosphoenolpyruvate carboxylase - Prom 107823 - 107882 1.7 122 58 Op 1 . + CDS 107969 - 109741 2118 ## COG2966 Uncharacterized conserved protein 123 58 Op 2 . + CDS 109766 - 111394 2186 ## COG0591 Na+/proline symporter + Term 111429 - 111453 -1.0 - Term 111625 - 111676 20.4 124 59 Tu 1 . - CDS 111704 - 112804 1911 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 112826 - 112885 4.2 + Prom 112836 - 112895 1.6 125 60 Tu 1 . + CDS 112931 - 113302 407 ## BAD_0028 hypothetical protein + Term 113320 - 113393 24.2 126 61 Tu 1 . - CDS 113519 - 114529 796 ## COG1609 Transcriptional regulators - Prom 114685 - 114744 3.7 + Prom 114749 - 114808 5.1 127 62 Op 1 35/0.000 + CDS 114891 - 116147 1472 ## COG1653 ABC-type sugar transport system, periplasmic component 128 62 Op 2 38/0.000 + CDS 116250 - 117164 1043 ## COG1175 ABC-type sugar transport systems, permease components 129 62 Op 3 1/0.132 + CDS 117166 - 118029 909 ## COG0395 ABC-type sugar transport system, permease component 130 62 Op 4 . + CDS 118054 - 120171 1651 ## COG3345 Alpha-galactosidase + Term 120185 - 120224 7.5 + Prom 120173 - 120232 1.6 131 62 Op 5 . + CDS 120262 - 123642 2766 ## MTES_1349 hypothetical protein + Term 123687 - 123734 7.4 132 63 Tu 1 . - CDS 123832 - 124269 474 ## BAD_0029 hypothetical protein - Prom 124462 - 124521 5.6 + Prom 124421 - 124480 3.7 133 64 Tu 1 . + CDS 124599 - 127055 3640 ## COG0058 Glucan phosphorylase + Term 127147 - 127195 13.5 - Term 127335 - 127370 -0.5 134 65 Tu 1 . - CDS 127382 - 127612 406 ## BBIF_0127 hypothetical protein 135 66 Tu 1 . + CDS 127753 - 128541 791 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 136 67 Tu 1 . - CDS 128550 - 129143 144 ## + Prom 128788 - 128847 2.5 137 68 Tu 1 . + CDS 128937 - 130211 1456 ## BAD_0033 N6-adenine-specific methylase + Term 130225 - 130265 2.2 - Term 130304 - 130347 12.5 138 69 Tu 1 . - CDS 130391 - 130858 739 ## BAD_0034 putative septation inhibitor protein + Prom 130848 - 130907 2.8 139 70 Op 1 . + CDS 130994 - 131773 1029 ## COG3879 Uncharacterized protein conserved in bacteria 140 70 Op 2 . + CDS 131780 - 132874 1253 ## COG3764 Sortase (surface protein transpeptidase) + Prom 132934 - 132993 2.1 141 71 Tu 1 . + CDS 133013 - 133657 874 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Term 133721 - 133760 4.1 - Term 133901 - 133947 18.0 142 72 Op 1 7/0.000 - CDS 133956 - 136016 2579 ## COG0515 Serine/threonine protein kinase 143 72 Op 2 4/0.018 - CDS 136013 - 136957 979 ## COG0515 Serine/threonine protein kinase 144 72 Op 3 19/0.000 - CDS 136954 - 138420 1680 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 145 72 Op 4 4/0.018 - CDS 138413 - 139966 1661 ## COG0772 Bacterial cell division membrane protein 146 72 Op 5 7/0.000 - CDS 139993 - 141576 1783 ## COG0631 Serine/threonine protein phosphatase 147 72 Op 6 5/0.018 - CDS 141582 - 142097 355 ## COG1716 FOG: FHA domain 148 72 Op 7 . - CDS 142126 - 142833 881 ## COG1716 FOG: FHA domain + Prom 142784 - 142843 1.8 149 73 Tu 1 . + CDS 142983 - 145499 2689 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases - Term 145645 - 145681 -0.2 150 74 Op 1 . - CDS 145723 - 146952 1103 ## BAD_0046 hypothetical protein 151 74 Op 2 . - CDS 147002 - 147667 753 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 152 74 Op 3 . - CDS 147676 - 147837 106 ## gi|154486398|ref|ZP_02027805.1| hypothetical protein BIFADO_00210 + Prom 147788 - 147847 2.2 153 75 Op 1 2/0.079 + CDS 147933 - 149021 1107 ## COG2267 Lysophospholipase 154 75 Op 2 . + CDS 149095 - 149997 1207 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 150199 - 150237 -0.6 - Term 150031 - 150087 16.1 155 76 Tu 1 . - CDS 150142 - 150603 724 ## COG0071 Molecular chaperone (small heat shock protein) - TRNA 151177 - 151259 50.3 # Leu CAG 0 0 - Term 151201 - 151235 -0.6 156 77 Op 1 . - CDS 151275 - 151454 64 ## 157 77 Op 2 . - CDS 151469 - 152875 1553 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase - Prom 153101 - 153160 3.1 158 78 Tu 1 . + CDS 153098 - 155017 2774 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 155176 - 155213 8.5 159 79 Tu 1 . + CDS 155373 - 157682 2784 ## COG2217 Cation transport ATPase - Term 157454 - 157497 2.2 160 80 Tu 1 . - CDS 157737 - 158747 991 ## COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D - Prom 158907 - 158966 2.3 + Prom 158714 - 158773 2.2 161 81 Tu 1 . + CDS 158931 - 160382 2260 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 160394 - 160451 1.6 162 82 Tu 1 . + CDS 160726 - 161781 960 ## BDP_0063 hypothetical protein + Prom 161846 - 161905 2.8 163 83 Tu 1 . + CDS 162000 - 163034 967 ## COG0501 Zn-dependent protease with chaperone function + Term 163215 - 163261 8.1 + TRNA 163138 - 163211 67.1 # Gly CCC 0 0 + Prom 163138 - 163197 76.8 164 84 Op 1 . + CDS 163332 - 163664 186 ## gi|154486413|ref|ZP_02027820.1| hypothetical protein BIFADO_00227 165 84 Op 2 . + CDS 163643 - 164629 900 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Term 164681 - 164718 1.7 166 85 Tu 1 . + CDS 164764 - 164934 76 ## gi|154486415|ref|ZP_02027822.1| hypothetical protein BIFADO_00229 - Term 164915 - 164961 4.5 167 86 Op 1 1/0.132 - CDS 164969 - 167290 2998 ## COG1511 Predicted membrane protein 168 86 Op 2 . - CDS 167287 - 169998 3256 ## COG1511 Predicted membrane protein - Prom 170089 - 170148 1.6 169 87 Op 1 . + CDS 170220 - 171374 1227 ## COG0191 Fructose/tagatose bisphosphate aldolase 170 87 Op 2 . + CDS 171560 - 172846 1791 ## COG0104 Adenylosuccinate synthase + Term 172901 - 172940 9.6 171 88 Tu 1 . + CDS 173023 - 174621 1833 ## COG0038 Chloride channel protein EriC + Prom 174684 - 174743 2.1 172 89 Op 1 . + CDS 174837 - 175895 1207 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 173 89 Op 2 . + CDS 175895 - 176281 542 ## BL0547 hypothetical protein + Prom 176288 - 176347 2.0 174 90 Op 1 24/0.000 + CDS 176415 - 177857 1657 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 175 90 Op 2 19/0.000 + CDS 177861 - 178844 1172 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 176 90 Op 3 18/0.000 + CDS 178837 - 179868 241 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 177 90 Op 4 1/0.132 + CDS 179870 - 180679 185 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Prom 180941 - 181000 1.7 178 91 Tu 1 . + CDS 181047 - 182342 1595 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component + Term 182417 - 182475 16.8 + Prom 182610 - 182669 7.2 179 92 Tu 1 . + CDS 182725 - 183810 1272 ## COG1609 Transcriptional regulators - Term 183778 - 183827 8.7 180 93 Tu 1 . - CDS 183871 - 184824 1221 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 181 94 Tu 1 . + CDS 185129 - 185941 879 ## COG4336 Uncharacterized conserved protein 182 95 Op 1 . + CDS 186069 - 186275 177 ## COG1540 Uncharacterized proteins, homologs of lactam utilization protein B 183 95 Op 2 . + CDS 186275 - 186493 248 ## BDP_0105 LamB/YcsF family protein + Term 186599 - 186655 7.1 + Prom 186607 - 186666 2.2 184 96 Tu 1 . + CDS 186747 - 188261 2165 ## COG0366 Glycosidases + Term 188416 - 188464 6.0 185 97 Tu 1 . + CDS 188553 - 190145 1351 ## COG0477 Permeases of the major facilitator superfamily 186 98 Tu 1 . - CDS 190163 - 190543 81 ## - Prom 190724 - 190783 2.2 187 99 Tu 1 . + CDS 190624 - 191973 1990 ## COG0477 Permeases of the major facilitator superfamily - Term 191942 - 191980 3.0 188 100 Tu 1 . - CDS 192152 - 192358 68 ## - Prom 192419 - 192478 2.3 189 101 Tu 1 . + CDS 192260 - 193312 1510 ## COG0059 Ketol-acid reductoisomerase + Term 193349 - 193400 10.5 - Term 193423 - 193461 11.4 190 102 Tu 1 . - CDS 193509 - 194549 1377 ## COG0059 Ketol-acid reductoisomerase + Prom 194560 - 194619 3.0 191 103 Tu 1 . + CDS 194823 - 196670 1962 ## BAD_0083 sialic acid-specific 9-O-acetylesterase 192 104 Tu 1 . - CDS 196808 - 198337 2125 ## COG1113 Gamma-aminobutyrate permease and related permeases - Prom 198460 - 198519 2.1 193 105 Op 1 . + CDS 198336 - 198551 58 ## 194 105 Op 2 . + CDS 198611 - 201679 3708 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 195 106 Tu 1 . - CDS 201698 - 203164 1677 ## COG0475 Kef-type K+ transport systems, membrane components - Prom 203244 - 203303 4.3 + Prom 203235 - 203294 4.2 196 107 Tu 1 . + CDS 203401 - 204492 767 ## COG3764 Sortase (surface protein transpeptidase) + Term 204647 - 204699 -0.4 197 108 Op 1 . + CDS 205042 - 207468 1756 ## BDP_0143 fimbriae protein with LPXTG motif and von Willebrand factor typeA domain 198 108 Op 2 . + CDS 207565 - 209142 1368 ## BAD_1467 cell surface protein fimafimbrial subunit 199 109 Tu 1 . - CDS 209031 - 209375 124 ## + Prom 209212 - 209271 1.6 200 110 Tu 1 . + CDS 209350 - 209787 497 ## BDP_0145 hypothetical protein + Prom 209831 - 209890 3.2 201 111 Tu 1 . + CDS 210081 - 211619 1949 ## COG1113 Gamma-aminobutyrate permease and related permeases + Term 211818 - 211858 -0.9 - Term 211677 - 211735 11.2 202 112 Op 1 5/0.018 - CDS 211800 - 212714 1233 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 203 112 Op 2 5/0.018 - CDS 212871 - 213584 899 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 204 112 Op 3 . - CDS 213637 - 213831 382 ## COG2104 Sulfur transfer protein involved in thiamine biosynthesis 205 113 Tu 1 . + CDS 214336 - 215304 1166 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Prom 215384 - 215443 4.6 206 114 Tu 1 . + CDS 215488 - 215979 542 ## COG1846 Transcriptional regulators 207 115 Op 1 35/0.000 + CDS 216106 - 217857 221 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 208 115 Op 2 . + CDS 217869 - 219710 217 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P + Term 219727 - 219779 12.8 209 116 Tu 1 . - CDS 219694 - 220032 118 ## + Prom 219743 - 219802 1.9 210 117 Tu 1 . + CDS 219881 - 220861 1362 ## COG4989 Predicted oxidoreductase - Term 220658 - 220699 -0.5 211 118 Tu 1 . - CDS 220946 - 221998 728 ## BAD_0096 hypothetical protein + Prom 222555 - 222614 4.7 212 119 Op 1 5/0.018 + CDS 222738 - 224525 2380 ## COG0672 High-affinity Fe2+/Pb2+ permease 213 119 Op 2 3/0.026 + CDS 224587 - 225246 962 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport 214 120 Op 1 4/0.018 + CDS 225510 - 226781 1667 ## COG4393 Predicted membrane protein 215 120 Op 2 10/0.000 + CDS 226807 - 228306 1576 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 216 120 Op 3 36/0.000 + CDS 228337 - 229653 176 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 217 120 Op 4 . + CDS 229656 - 230546 1144 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 218 120 Op 5 . + CDS 230543 - 231097 735 ## BAD_0103 hypothetical protein + Term 231128 - 231162 3.4 - Term 230934 - 230974 2.7 219 121 Op 1 . - CDS 231162 - 231842 562 ## BAD_0104 TetR-type transcriptional regulator 220 121 Op 2 1/0.132 - CDS 231839 - 234034 2568 ## COG1511 Predicted membrane protein 221 121 Op 3 . - CDS 234031 - 236868 2904 ## COG1511 Predicted membrane protein 222 122 Tu 1 . + CDS 237331 - 238635 1111 ## COG4905 Predicted membrane protein + Term 238667 - 238711 9.1 223 123 Tu 1 . - CDS 238851 - 239087 361 ## COG0695 Glutaredoxin and related proteins - Prom 239174 - 239233 4.4 - TRNA 239627 - 239699 73.8 # Lys TTT 0 0 + Prom 239666 - 239725 2.0 224 124 Tu 1 . + CDS 239803 - 241407 1634 ## COG4690 Dipeptidase - Term 241516 - 241577 -0.8 225 125 Tu 1 . - CDS 241592 - 242623 1314 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 226 126 Op 1 . - CDS 242807 - 243742 1085 ## COG1309 Transcriptional regulator 227 126 Op 2 . - CDS 243679 - 243831 67 ## - Prom 243924 - 243983 6.3 + Prom 243873 - 243932 8.6 228 127 Op 1 . + CDS 243958 - 244251 290 ## Blon_0221 hypothetical protein 229 127 Op 2 . + CDS 244248 - 244421 163 ## gi|154486488|ref|ZP_02027895.1| hypothetical protein BIFADO_00303 230 127 Op 3 . + CDS 244471 - 245181 378 ## Arch_0524 hypothetical protein + Term 245222 - 245276 10.3 231 128 Tu 1 . + CDS 245592 - 246866 660 ## PROTEIN SUPPORTED gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 + Term 246897 - 246964 21.3 - Term 246896 - 246938 7.8 232 129 Tu 1 . - CDS 246953 - 248143 1475 ## COG0475 Kef-type K+ transport systems, membrane components - Prom 248341 - 248400 2.6 + Prom 248387 - 248446 2.6 233 130 Op 1 24/0.000 + CDS 248558 - 249853 1654 ## COG0004 Ammonia permease 234 130 Op 2 3/0.026 + CDS 249855 - 250193 517 ## COG0347 Nitrogen regulatory protein PII + Term 250244 - 250274 1.8 235 131 Tu 1 . + CDS 250350 - 252176 2142 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase + Term 252288 - 252329 -0.3 236 132 Op 1 . + CDS 252563 - 254020 1822 ## COG0305 Replicative DNA helicase 237 132 Op 2 10/0.000 + CDS 254022 - 255605 2041 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 238 132 Op 3 . + CDS 255671 - 256429 991 ## COG3442 Predicted glutamine amidotransferase 239 133 Tu 1 . + CDS 256578 - 256817 414 ## BAD_0119 hypothetical protein + Term 256833 - 256881 3.3 240 134 Tu 1 . + CDS 256957 - 258837 2319 ## COG0661 Predicted unusual protein kinase + Term 258839 - 258895 4.9 241 135 Tu 1 . - CDS 258809 - 259042 145 ## + Prom 258993 - 259052 6.3 242 136 Tu 1 . + CDS 259096 - 261309 2469 ## COG3764 Sortase (surface protein transpeptidase) 243 137 Tu 1 . + CDS 261818 - 262882 1209 ## COG0584 Glycerophosphoryl diester phosphodiesterase + Term 262969 - 263021 18.6 244 138 Tu 1 . - CDS 263043 - 263684 937 ## COG0035 Uracil phosphoribosyltransferase - Prom 263918 - 263977 2.0 - Term 263836 - 263861 -0.5 245 139 Op 1 . - CDS 264039 - 264815 880 ## BAD_0125 hypothetical protein 246 139 Op 2 3/0.026 - CDS 264817 - 265905 1012 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 265953 - 266001 12.3 247 140 Op 1 . - CDS 266013 - 268247 2857 ## COG0855 Polyphosphate kinase 248 140 Op 2 . - CDS 268312 - 268878 -26 ## gi|154486510|ref|ZP_02027917.1| hypothetical protein BIFADO_00325 249 141 Op 1 . + CDS 269139 - 269930 646 ## BAD_0128 hypothetical protein 250 141 Op 2 . + CDS 269911 - 270903 630 ## COG4962 Flp pilus assembly protein, ATPase CpaF + Term 271021 - 271086 -0.9 251 142 Tu 1 . + CDS 271149 - 271673 328 ## BAD_0130 hypothetical protein 252 143 Tu 1 . + CDS 271928 - 272185 173 ## BAD_0131 hypothetical protein 253 144 Op 1 . + CDS 272452 - 272739 374 ## BAD_0132 hypothetical protein 254 144 Op 2 . + CDS 272742 - 273107 292 ## BAD_0133 hypothetical protein 255 144 Op 3 . + CDS 273160 - 273579 301 ## BAD_0134 hypothetical protein 256 144 Op 4 . + CDS 273632 - 274792 1109 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase + Term 274818 - 274862 2.3 257 145 Tu 1 . - CDS 274896 - 275492 645 ## BAD_0136 TetR-type transcriptional regulator + Prom 275678 - 275737 1.5 258 146 Tu 1 1/0.132 + CDS 275758 - 278202 2278 ## COG2812 DNA polymerase III, gamma/tau subunits 259 147 Tu 1 . + CDS 278319 - 278921 838 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Prom 278934 - 278993 4.3 260 148 Op 1 1/0.132 + CDS 279041 - 279802 871 ## COG0527 Aspartokinases + Prom 279816 - 279875 3.5 261 148 Op 2 . + CDS 279895 - 280461 1000 ## COG0527 Aspartokinases + Term 280495 - 280531 5.1 - Term 280571 - 280616 10.6 262 149 Tu 1 . - CDS 280677 - 281771 1502 ## COG0136 Aspartate-semialdehyde dehydrogenase + Prom 281739 - 281798 2.0 263 150 Op 1 . + CDS 281969 - 282601 505 ## BAD_0142 hypothetical protein 264 150 Op 2 . + CDS 282670 - 285213 1960 ## BAD_0143 serine_threonine protein kinase 265 151 Tu 1 . - CDS 285290 - 286813 1225 ## BAD_0144 hypothetical protein - Prom 286920 - 286979 2.6 266 152 Tu 1 . + CDS 287015 - 288925 2691 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Term 288973 - 289020 14.6 + Prom 289088 - 289147 4.1 267 153 Op 1 . + CDS 289183 - 291297 2081 ## COG3940 Predicted beta-xylosidase 268 153 Op 2 . + CDS 291325 - 292398 1122 ## COG1609 Transcriptional regulators + Term 292423 - 292451 -0.6 + Prom 292642 - 292701 5.4 269 154 Tu 1 . + CDS 292738 - 293757 770 ## PROTEIN SUPPORTED gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase + Term 293808 - 293865 -0.1 270 155 Tu 1 . - CDS 293867 - 294097 59 ## + Prom 293809 - 293868 5.3 271 156 Op 1 35/0.000 + CDS 293976 - 295247 1896 ## COG1653 ABC-type sugar transport system, periplasmic component 272 156 Op 2 38/0.000 + CDS 295247 - 296161 1288 ## COG1175 ABC-type sugar transport systems, permease components 273 156 Op 3 . + CDS 296164 - 297060 1497 ## COG0395 ABC-type sugar transport system, permease component + Term 297082 - 297125 11.4 - Term 296928 - 296969 -0.3 274 157 Tu 1 . - CDS 297050 - 297250 105 ## 275 158 Op 1 . + CDS 297177 - 297650 619 ## MPTP_0104 hypothetical protein + Term 297665 - 297707 8.4 + Prom 297701 - 297760 1.6 276 158 Op 2 . + CDS 297783 - 298847 1144 ## BDP_0243 endo-1,4-beta-xylanase + Term 298893 - 298945 15.5 - Term 298882 - 298931 15.7 277 159 Tu 1 . - CDS 298972 - 301170 2965 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 301416 - 301475 2.0 + Prom 301414 - 301473 3.5 278 160 Tu 1 . + CDS 301499 - 302641 1057 ## PROTEIN SUPPORTED gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 + Term 302742 - 302783 5.5 - Term 302730 - 302771 5.5 279 161 Tu 1 . - CDS 302868 - 304046 1503 ## COG0562 UDP-galactopyranose mutase - Prom 304119 - 304178 1.9 280 162 Tu 1 . + CDS 303921 - 304304 159 ## gi|154486546|ref|ZP_02027953.1| hypothetical protein BIFADO_00361 281 163 Tu 1 . + CDS 304444 - 305421 1112 ## BAD_0160 pre-pilin peptidase + Prom 305448 - 305507 3.6 282 164 Tu 1 . + CDS 305533 - 308610 3738 ## COG0550 Topoisomerase IA 283 165 Op 1 22/0.000 + CDS 308732 - 309385 586 ## COG0125 Thymidylate kinase 284 165 Op 2 . + CDS 309382 - 310530 1297 ## COG0470 ATPase involved in DNA replication 285 166 Tu 1 . - CDS 310573 - 311628 1111 ## COG1609 Transcriptional regulators 286 167 Tu 1 . + CDS 311564 - 311776 123 ## + Term 311883 - 311921 2.1 - Term 311771 - 311814 8.0 287 168 Tu 1 . - CDS 311858 - 312118 516 ## BDP_0253 HPr family phosphocarrier (EC:2.7.3.9) - Prom 312248 - 312307 3.5 + Prom 312273 - 312332 4.9 288 169 Tu 1 . + CDS 312462 - 314111 2520 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 314197 - 314240 3.0 289 170 Tu 1 . + CDS 314385 - 314942 676 ## COG1881 Phospholipid-binding protein 290 171 Tu 1 . + CDS 315051 - 316643 2236 ## COG4690 Dipeptidase + Term 316744 - 316802 4.0 + Prom 316747 - 316806 2.5 291 172 Tu 1 . + CDS 316908 - 318425 1807 ## COG2759 Formyltetrahydrofolate synthetase + Term 318508 - 318546 8.1 - Term 318640 - 318693 2.2 292 173 Tu 1 . - CDS 318866 - 319213 521 ## BAD_0170 hypothetical protein + Prom 319188 - 319247 2.6 293 174 Tu 1 . + CDS 319321 - 319857 769 ## BAD_0171 hypothetical protein + Term 319889 - 319942 17.1 - Term 319877 - 319929 14.0 294 175 Tu 1 . - CDS 319980 - 321404 1526 ## COG0477 Permeases of the major facilitator superfamily 295 176 Op 1 . + CDS 321783 - 322442 713 ## COG0406 Fructose-2,6-bisphosphatase 296 176 Op 2 . + CDS 322526 - 323587 1167 ## BAD_0174 hypothetical protein + Term 323738 - 323808 22.0 - Term 323730 - 323789 23.6 297 177 Tu 1 . - CDS 323847 - 325118 1349 ## COG3152 Predicted membrane protein - Prom 325292 - 325351 2.6 + Prom 325072 - 325131 3.4 298 178 Tu 1 . + CDS 325286 - 326806 2453 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 326839 - 326882 11.5 + TRNA 327005 - 327080 49.2 # Glu CTC 0 0 + TRNA 327116 - 327190 63.3 # Gln CTG 0 0 + Prom 327115 - 327174 79.9 299 179 Tu 1 . + CDS 327358 - 328836 1087 ## BAD_0177 hypothetical protein + Term 328881 - 328921 10.6 - Term 328862 - 328916 12.3 300 180 Tu 1 . - CDS 328944 - 329738 812 ## COG1414 Transcriptional regulator - Prom 329769 - 329828 5.4 + Prom 329826 - 329885 2.3 301 181 Op 1 30/0.000 + CDS 330085 - 331488 1875 ## COG0065 3-isopropylmalate dehydratase large subunit 302 181 Op 2 . + CDS 331578 - 332267 931 ## COG0066 3-isopropylmalate dehydratase small subunit + Term 332382 - 332413 -1.0 + Prom 332496 - 332555 3.4 303 182 Tu 1 . + CDS 332668 - 334281 807 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 304 183 Op 1 . + CDS 334474 - 335616 1262 ## COG0167 Dihydroorotate dehydrogenase 305 183 Op 2 1/0.132 + CDS 335712 - 337037 1967 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 337043 - 337110 6.5 + Prom 337246 - 337305 1.6 306 184 Tu 1 . + CDS 337368 - 338288 1046 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 307 185 Op 1 4/0.018 + CDS 338460 - 339458 1406 ## COG0240 Glycerol-3-phosphate dehydrogenase 308 185 Op 2 . + CDS 339533 - 340669 1614 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 309 186 Op 1 3/0.026 + CDS 340911 - 342077 2012 ## COG1840 ABC-type Fe3+ transport system, periplasmic component 310 186 Op 2 5/0.018 + CDS 342079 - 342993 1094 ## COG4132 ABC-type uncharacterized transport system, permease component 311 186 Op 3 8/0.000 + CDS 342984 - 343898 1141 ## COG1177 ABC-type spermidine/putrescine transport system, permease component II 312 186 Op 4 . + CDS 343895 - 345082 1596 ## COG3842 ABC-type spermidine/putrescine transport systems, ATPase components + Term 345094 - 345152 7.0 + Prom 345176 - 345235 4.1 313 187 Tu 1 . + CDS 345278 - 346417 1422 ## BAD_0191 hypothetical protein + Term 346437 - 346484 14.6 - Term 346428 - 346469 5.3 314 188 Tu 1 . - CDS 346526 - 347311 1200 ## COG0668 Small-conductance mechanosensitive channel - Prom 347386 - 347445 1.6 315 189 Tu 1 . + CDS 347443 - 348648 1160 ## BAD_0193 hypothetical protein + Term 348715 - 348761 2.0 316 190 Tu 1 . - CDS 348468 - 348800 116 ## - Prom 348932 - 348991 1.6 + Prom 348880 - 348939 3.6 317 191 Tu 1 . + CDS 348985 - 350193 1239 ## BAD_0194 hypothetical protein + Prom 350250 - 350309 2.7 318 192 Tu 1 . + CDS 350349 - 351026 689 ## BAD_0195 hypothetical protein 319 193 Tu 1 . + CDS 351131 - 352321 1902 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 352423 - 352467 4.2 - Term 352409 - 352457 2.8 320 194 Tu 1 . - CDS 352681 - 353574 1230 ## COG1023 Predicted 6-phosphogluconate dehydrogenase - Prom 353670 - 353729 1.5 321 195 Op 1 4/0.018 - CDS 353761 - 355089 2140 ## COG2610 H+/gluconate symporter and related permeases 322 195 Op 2 . - CDS 355172 - 355708 760 ## COG3265 Gluconate kinase - Prom 355760 - 355819 4.4 + Prom 355789 - 355848 5.0 323 196 Tu 1 . + CDS 355979 - 356698 808 ## COG2186 Transcriptional regulators 324 197 Tu 1 . - CDS 356742 - 357533 1034 ## BAD_0201 hypothetical protein - Prom 357593 - 357652 5.1 325 198 Tu 1 . - CDS 357750 - 359114 1903 ## COG2270 Permeases of the major facilitator superfamily + Prom 359299 - 359358 3.7 326 199 Tu 1 . + CDS 359440 - 359634 339 ## PROTEIN SUPPORTED gi|119025221|ref|YP_909066.1| 50S ribosomal protein L28 + Term 359652 - 359701 2.2 + Prom 359691 - 359750 1.8 327 200 Op 1 1/0.132 + CDS 359795 - 362458 2492 ## COG1200 RecG-like helicase 328 200 Op 2 . + CDS 362446 - 363093 194 ## PROTEIN SUPPORTED gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 - Term 363103 - 363150 9.1 329 201 Tu 1 . - CDS 363168 - 364070 1048 ## COG0336 tRNA-(guanine-N1)-methyltransferase 330 202 Tu 1 . + CDS 364072 - 364179 60 ## - Term 364108 - 364143 6.3 331 203 Op 1 12/0.000 - CDS 364163 - 364750 777 ## COG0806 RimM protein, required for 16S rRNA processing 332 203 Op 2 19/0.000 - CDS 364772 - 365005 237 ## COG1837 Predicted RNA-binding protein (contains KH domain) 333 203 Op 3 . - CDS 365008 - 365457 744 ## PROTEIN SUPPORTED gi|119025227|ref|YP_909072.1| 30S ribosomal protein S16 - Prom 365575 - 365634 3.6 334 204 Tu 1 . + CDS 365824 - 366858 1126 ## BAD_0210 hypothetical protein + Term 366880 - 366935 18.5 - Term 366859 - 366928 20.2 335 205 Op 1 . - CDS 366986 - 368635 2255 ## COG0541 Signal recognition particle GTPase 336 205 Op 2 . - CDS 368691 - 370430 1911 ## COG0215 Cysteinyl-tRNA synthetase - Prom 370508 - 370567 1.6 + Prom 370293 - 370352 2.2 337 206 Tu 1 . + CDS 370458 - 371186 895 ## COG0518 GMP synthase - Glutamine amidotransferase domain - Term 370928 - 370958 0.3 338 207 Tu 1 . - CDS 371202 - 371339 57 ## 339 208 Op 1 . + CDS 371317 - 371511 72 ## 340 208 Op 2 . + CDS 371498 - 373663 2617 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 373834 - 373873 0.1 - Term 373719 - 373758 10.8 341 209 Op 1 . - CDS 373760 - 374059 212 ## Balac_0042 hypothetical protein 342 209 Op 2 . - CDS 374059 - 374343 350 ## Arch_1197 addiction module antitoxin, RelB/DinJ family - Prom 374373 - 374432 5.0 343 210 Tu 1 . + CDS 374370 - 374522 80 ## 344 211 Tu 1 . - CDS 374445 - 375332 442 ## gi|154486619|ref|ZP_02028026.1| hypothetical protein BIFADO_00436 345 212 Tu 1 . + CDS 375630 - 376004 415 ## BAD_0215 hypothetical protein 346 213 Tu 1 . + CDS 376165 - 376515 63 ## + Term 376633 - 376690 3.5 - Term 376470 - 376508 0.4 347 214 Op 1 . - CDS 376574 - 377728 412 ## BAD_0216 hypothetical protein 348 214 Op 2 . - CDS 377731 - 378360 161 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 378487 - 378546 3.2 + Prom 378424 - 378483 4.3 349 215 Op 1 . + CDS 378527 - 379138 364 ## BAD_0218 transcription regulator ArsR 350 215 Op 2 . + CDS 379219 - 380478 1082 ## COG0477 Permeases of the major facilitator superfamily + Term 380492 - 380537 15.7 - Term 380476 - 380530 17.2 351 216 Op 1 32/0.000 - CDS 380555 - 381109 948 ## COG0440 Acetolactate synthase, small (regulatory) subunit 352 216 Op 2 . - CDS 381142 - 383001 2650 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] - Prom 383141 - 383200 2.6 353 217 Tu 1 . - CDS 383306 - 384202 1284 ## COG0571 dsRNA-specific ribonuclease - Prom 384371 - 384430 3.9 - Term 384375 - 384418 12.4 354 218 Op 1 . - CDS 384448 - 384642 352 ## PROTEIN SUPPORTED gi|119025242|ref|YP_909087.1| 50S ribosomal protein L32 355 218 Op 2 . - CDS 384738 - 385352 899 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein 356 218 Op 3 . - CDS 385421 - 386248 983 ## BAD_0226 hypothetical protein 357 218 Op 4 . - CDS 386248 - 386742 336 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 358 219 Tu 1 . + CDS 386898 - 387215 384 ## BAD_0227 hypothetical protein + Term 387312 - 387374 24.9 - Term 387310 - 387350 14.3 359 220 Tu 1 . - CDS 387402 - 388724 1940 ## COG1488 Nicotinic acid phosphoribosyltransferase - Prom 388750 - 388809 1.7 + Prom 388704 - 388763 1.5 360 221 Op 1 8/0.000 + CDS 388948 - 389694 1126 ## COG0689 RNase PH 361 221 Op 2 . + CDS 389816 - 390496 394 ## PROTEIN SUPPORTED gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase + Term 390532 - 390570 2.3 + TRNA 390632 - 390707 88.3 # Thr CGT 0 0 + TRNA 390800 - 390880 66.5 # Leu TAG 0 0 + Prom 390802 - 390861 80.3 362 222 Op 1 . + CDS 390882 - 391544 266 ## COG0679 Predicted permeases 363 222 Op 2 . + CDS 391306 - 391890 798 ## COG0679 Predicted permeases + Term 392051 - 392100 -0.9 + Prom 391957 - 392016 2.4 364 223 Op 1 . + CDS 392235 - 393932 2814 ## COG0166 Glucose-6-phosphate isomerase + Term 393975 - 394026 11.4 + Prom 393998 - 394057 2.5 365 223 Op 2 . + CDS 394211 - 394612 661 ## PROTEIN SUPPORTED gi|119025250|ref|YP_909095.1| 50S ribosomal protein L19 + Term 394633 - 394686 13.5 366 224 Op 1 4/0.018 + CDS 394731 - 395378 875 ## COG0681 Signal peptidase I 367 224 Op 2 . + CDS 395378 - 396094 697 ## COG0164 Ribonuclease HII 368 225 Op 1 . + CDS 396223 - 396948 289 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 369 225 Op 2 . + CDS 396945 - 398450 1306 ## BAD_0236 hypothetical protein 370 226 Tu 1 . - CDS 398498 - 399442 1359 ## COG0679 Predicted permeases 371 227 Tu 1 . + CDS 399580 - 400776 1524 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 400896 - 400962 13.8 + Prom 400911 - 400970 3.6 372 228 Tu 1 4/0.018 + CDS 401193 - 403991 2987 ## COG1530 Ribonucleases G and E + Term 404066 - 404122 -0.8 + Prom 404010 - 404069 1.8 373 229 Op 1 32/0.000 + CDS 404136 - 404444 467 ## PROTEIN SUPPORTED gi|227507812|ref|ZP_03937861.1| ribosomal protein L21 374 229 Op 2 14/0.000 + CDS 404484 - 404735 424 ## PROTEIN SUPPORTED gi|119025259|ref|YP_909104.1| 50S ribosomal protein L27 + Term 404766 - 404802 4.0 375 229 Op 3 7/0.000 + CDS 404814 - 406505 2418 ## COG0536 Predicted GTPase + Term 406520 - 406564 13.5 376 230 Tu 1 . + CDS 406588 - 407721 1416 ## COG0263 Glutamate 5-kinase 377 231 Tu 1 . + CDS 407845 - 409053 1691 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 409068 - 409113 -1.0 + TRNA 409309 - 409384 87.9 # Trp CCA 0 0 + Prom 409310 - 409369 78.8 378 232 Op 1 . + CDS 409418 - 409645 417 ## BAD_0245 preprotein translocase subunit SecE 379 232 Op 2 45/0.000 + CDS 409670 - 410494 1297 ## COG0250 Transcription antiterminator + Term 410618 - 410651 4.5 380 232 Op 3 55/0.000 + CDS 410839 - 411270 714 ## PROTEIN SUPPORTED gi|119025265|ref|YP_909110.1| 50S ribosomal protein L11 381 232 Op 4 . + CDS 411285 - 411977 1157 ## PROTEIN SUPPORTED gi|119025266|ref|YP_909111.1| 50S ribosomal protein L1 + Term 412005 - 412047 8.3 - Term 412071 - 412112 1.4 382 233 Tu 1 . - CDS 412125 - 412904 782 ## COG2508 Regulator of polyketide synthase expression 383 234 Op 1 . + CDS 412997 - 415168 2302 ## BAD_0250 hypothetical protein 384 234 Op 2 . + CDS 415165 - 416115 842 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase - Term 416436 - 416475 1.4 385 235 Tu 1 . - CDS 416530 - 417123 893 ## COG1268 Uncharacterized conserved protein - Prom 417144 - 417203 4.6 386 236 Op 1 7/0.000 + CDS 417319 - 419223 2443 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 387 236 Op 2 . + CDS 419220 - 420866 2145 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 388 236 Op 3 3/0.026 + CDS 420941 - 430276 12728 ## COG4982 3-oxoacyl-[acyl-carrier protein] reductase + Term 430336 - 430377 6.6 + Prom 430293 - 430352 2.2 389 237 Tu 1 . + CDS 430435 - 430893 455 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) + Term 430902 - 430939 -1.0 + TRNA 430979 - 431052 79.8 # Gly TCC 0 0 + Prom 430980 - 431039 77.7 390 238 Op 1 . + CDS 431199 - 431876 917 ## BAD_0258 hypothetical protein 391 238 Op 2 26/0.000 + CDS 432033 - 432302 449 ## PROTEIN SUPPORTED gi|119025277|ref|YP_909122.1| 30S ribosomal protein S15 + Term 432311 - 432350 8.1 392 238 Op 3 . + CDS 432533 - 435211 1441 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 435359 - 435390 3.2 393 239 Tu 1 . - CDS 435289 - 435708 137 ## gi|154486676|ref|ZP_02028083.1| hypothetical protein BIFADO_00497 394 240 Tu 1 2/0.079 + CDS 435520 - 436080 860 ## COG1704 Uncharacterized conserved protein + Term 436100 - 436150 6.4 395 241 Op 1 . + CDS 436219 - 438441 2361 ## COG4907 Predicted membrane protein 396 241 Op 2 . + CDS 438509 - 440317 1577 ## BAD_0263 hypothetical protein + Term 440412 - 440454 4.8 397 242 Tu 1 . + CDS 440546 - 441409 1189 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 398 243 Tu 1 . - CDS 441511 - 442188 863 ## COG1279 Lysine efflux permease - Prom 442310 - 442369 4.6 + Prom 442238 - 442297 4.8 399 244 Op 1 . + CDS 442463 - 443974 1814 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 443980 - 444039 2.4 400 244 Op 2 . + CDS 444065 - 445654 1780 ## COG0826 Collagenase and related proteases 401 244 Op 3 . + CDS 445709 - 446740 1373 ## COG1496 Uncharacterized conserved protein 402 245 Op 1 . + CDS 446880 - 447689 304 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 403 245 Op 2 . + CDS 447766 - 448452 725 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 404 246 Op 1 . + CDS 448687 - 450120 2072 ## BAD_0271 hypothetical protein 405 246 Op 2 . + CDS 450143 - 451483 1826 ## COG3579 Aminopeptidase C + Term 451639 - 451683 9.1 406 247 Op 1 1/0.132 + CDS 451823 - 452956 1281 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 407 247 Op 2 . + CDS 453014 - 454198 1515 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 408 248 Tu 1 . + CDS 454302 - 455009 1059 ## COG0775 Nucleoside phosphorylase 409 249 Op 1 40/0.000 + CDS 455253 - 456662 1480 ## COG0642 Signal transduction histidine kinase 410 249 Op 2 . + CDS 456662 - 457366 996 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 457477 - 457529 2.0 + Prom 457498 - 457557 1.6 411 250 Op 1 39/0.000 + CDS 457602 - 458729 1802 ## COG0226 ABC-type phosphate transport system, periplasmic component 412 250 Op 2 38/0.000 + CDS 458891 - 459844 1381 ## COG0573 ABC-type phosphate transport system, permease component 413 250 Op 3 41/0.000 + CDS 459844 - 460839 1412 ## COG0581 ABC-type phosphate transport system, permease component 414 250 Op 4 . + CDS 460885 - 461664 190 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 461805 - 461852 14.1 + Prom 461848 - 461907 4.0 415 251 Tu 1 . + CDS 461944 - 462837 1067 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 462880 - 462919 3.6 - Term 462864 - 462912 8.9 416 252 Tu 1 . - CDS 462929 - 464317 2290 ## COG2252 Permeases - Prom 464416 - 464475 2.8 + Prom 464632 - 464691 3.8 417 253 Op 1 47/0.000 + CDS 464740 - 465261 850 ## PROTEIN SUPPORTED gi|119025302|ref|YP_909147.1| 50S ribosomal protein L10 418 253 Op 2 . + CDS 465376 - 465756 599 ## PROTEIN SUPPORTED gi|119025303|ref|YP_909148.1| 50S ribosomal protein L7/L12 + Term 465799 - 465835 4.4 + Prom 465811 - 465870 2.2 419 254 Op 1 . + CDS 465989 - 467476 1486 ## BAD_0286 hypothetical protein 420 254 Op 2 . + CDS 467485 - 471105 4077 ## BAD_0287 hypothetical protein 421 254 Op 3 . + CDS 471129 - 471374 148 ## BDP_0399 hypothetical protein + Term 471587 - 471630 8.2 422 255 Tu 1 . - CDS 471418 - 471960 516 ## BAD_0288 hypothetical protein - Term 472198 - 472233 6.0 423 256 Op 1 3/0.026 - CDS 472334 - 472516 283 ## COG2331 Uncharacterized protein conserved in bacteria 424 256 Op 2 . - CDS 472599 - 473219 264 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 425 257 Tu 1 . + CDS 473321 - 473956 376 ## PROTEIN SUPPORTED gi|227385132|ref|ZP_03868523.1| acetyltransferase, ribosomal protein N-acetylase 426 258 Tu 1 . + CDS 474016 - 475212 952 ## BAD_0291 hypothetical protein + Term 475219 - 475277 -0.8 + Prom 475223 - 475282 2.9 427 259 Tu 1 . + CDS 475435 - 475728 539 ## COG0234 Co-chaperonin GroES (HSP10) + Term 475751 - 475807 8.6 + TRNA 475951 - 476032 64.3 # Tyr GTA 0 0 + TRNA 476034 - 476105 74.1 # Thr GGT 0 0 + TRNA 476111 - 476187 80.9 # Met CAT 0 0 + Prom 475953 - 476012 80.3 428 260 Op 1 . + CDS 476236 - 476406 300 ## PROTEIN SUPPORTED gi|119025311|ref|YP_909156.1| 50S ribosomal protein L33 + Term 476423 - 476461 8.6 429 260 Op 2 . + CDS 476468 - 477667 1293 ## COG0812 UDP-N-acetylmuramate dehydrogenase 430 261 Op 1 . + CDS 477773 - 479272 2167 ## COG0531 Amino acid transporters 431 261 Op 2 4/0.018 + CDS 479309 - 479629 530 ## COG1146 Ferredoxin + Term 479697 - 479751 21.1 + Prom 479734 - 479793 1.9 432 262 Tu 1 . + CDS 479828 - 480976 1175 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 481027 - 481063 7.2 433 263 Tu 1 . - CDS 480892 - 481317 187 ## BAD_0298 hypothetical protein - Prom 481337 - 481396 3.9 + Prom 481260 - 481319 5.5 434 264 Op 1 . + CDS 481515 - 483557 1767 ## BAD_0299 putative outer membrane protein 435 264 Op 2 . + CDS 483559 - 484698 961 ## COG3405 Endoglucanase Y 436 264 Op 3 . + CDS 484698 - 486284 875 ## COG3507 Beta-xylosidase 437 264 Op 4 . + CDS 486281 - 487732 853 ## COG2272 Carboxylesterase type B + Term 487740 - 487789 0.1 - TRNA 488295 - 488385 53.0 # Ser GCT 0 0 438 265 Op 1 . + CDS 488612 - 489943 806 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 439 265 Op 2 . + CDS 489982 - 491349 1058 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 440 265 Op 3 . + CDS 491429 - 492418 1129 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 441 265 Op 4 . + CDS 492478 - 493116 558 ## COG1739 Uncharacterized conserved protein 442 265 Op 5 . + CDS 493162 - 493824 812 ## BAD_0307 AbrB family trancriptional regulator + Term 493855 - 493881 -0.6 443 265 Op 6 . + CDS 493894 - 496056 2386 ## COG1640 4-alpha-glucanotransferase + Term 496078 - 496124 9.0 + Prom 496100 - 496159 4.3 444 266 Op 1 59/0.000 + CDS 496328 - 496777 766 ## PROTEIN SUPPORTED gi|119025327|ref|YP_909172.1| 50S ribosomal protein L13 445 266 Op 2 . + CDS 496798 - 497289 816 ## PROTEIN SUPPORTED gi|119025328|ref|YP_909173.1| 30S ribosomal protein S9 + Term 497315 - 497355 8.2 + Prom 497306 - 497365 2.2 446 267 Tu 1 . + CDS 497386 - 497571 63 ## + Term 497802 - 497857 -0.2 - Term 497303 - 497343 12.0 447 268 Tu 1 . - CDS 497540 - 499987 2646 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Prom 500216 - 500275 2.6 448 269 Tu 1 . + CDS 500302 - 500703 587 ## BAD_0314 hypothetical protein + Term 500778 - 500832 7.4 - Term 500766 - 500820 6.6 449 270 Tu 1 . - CDS 500875 - 502005 1076 ## COG1940 Transcriptional regulator/sugar kinase - Prom 502078 - 502137 2.0 + Prom 501989 - 502048 2.4 450 271 Op 1 7/0.000 + CDS 502222 - 503490 1143 ## COG0477 Permeases of the major facilitator superfamily 451 271 Op 2 . + CDS 503563 - 504603 1134 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases 452 271 Op 3 . + CDS 504643 - 505614 165 ## COG2207 AraC-type DNA-binding domain-containing proteins 453 272 Op 1 . - CDS 505574 - 505654 67 ## 454 272 Op 2 . - CDS 505668 - 505850 112 ## gi|154486743|ref|ZP_02028150.1| hypothetical protein BIFADO_00568 + Prom 505665 - 505724 4.8 455 273 Tu 1 . + CDS 505968 - 508697 3739 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 508768 - 508809 11.1 456 274 Op 1 40/0.000 + CDS 509157 - 509465 520 ## PROTEIN SUPPORTED gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 457 274 Op 2 58/0.000 + CDS 509483 - 510124 1095 ## PROTEIN SUPPORTED gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 458 274 Op 3 61/0.000 + CDS 510131 - 510796 1131 ## PROTEIN SUPPORTED gi|119025340|ref|YP_909185.1| 50S ribosomal protein L4 459 274 Op 4 61/0.000 + CDS 510802 - 511098 471 ## PROTEIN SUPPORTED gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 460 274 Op 5 60/0.000 + CDS 511135 - 511965 1448 ## PROTEIN SUPPORTED gi|119025342|ref|YP_909187.1| 50S ribosomal protein L2 461 274 Op 6 59/0.000 + CDS 511981 - 512259 493 ## PROTEIN SUPPORTED gi|119025343|ref|YP_909188.1| 30S ribosomal protein S19 462 274 Op 7 61/0.000 + CDS 512276 - 512635 582 ## PROTEIN SUPPORTED gi|119025344|ref|YP_909189.1| 50S ribosomal protein L22 463 274 Op 8 50/0.000 + CDS 512638 - 513441 1331 ## PROTEIN SUPPORTED gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 464 274 Op 9 50/0.000 + CDS 513449 - 513868 728 ## PROTEIN SUPPORTED gi|119025346|ref|YP_909191.1| 50S ribosomal protein L16 465 274 Op 10 50/0.000 + CDS 513868 - 514125 422 ## PROTEIN SUPPORTED gi|119025347|ref|YP_909192.1| 50S ribosomal protein L29 466 274 Op 11 50/0.000 + CDS 514125 - 514385 438 ## PROTEIN SUPPORTED gi|119025348|ref|YP_909193.1| 30S ribosomal protein S17 467 274 Op 12 57/0.000 + CDS 514477 - 514845 604 ## PROTEIN SUPPORTED gi|119025349|ref|YP_909194.1| 50S ribosomal protein L14 468 274 Op 13 48/0.000 + CDS 514847 - 515182 541 ## PROTEIN SUPPORTED gi|119025350|ref|YP_909195.1| 50S ribosomal protein L24 469 274 Op 14 50/0.000 + CDS 515179 - 515751 978 ## PROTEIN SUPPORTED gi|119025351|ref|YP_909196.1| 50S ribosomal protein L5 470 274 Op 15 50/0.000 + CDS 515753 - 515938 331 ## PROTEIN SUPPORTED gi|119025352|ref|YP_909197.1| 30S ribosomal protein S14 471 274 Op 16 55/0.000 + CDS 516023 - 516421 669 ## PROTEIN SUPPORTED gi|119025353|ref|YP_909198.1| 30S ribosomal protein S8 472 274 Op 17 46/0.000 + CDS 516439 - 516978 920 ## PROTEIN SUPPORTED gi|119025354|ref|YP_909199.1| 50S ribosomal protein L6 473 274 Op 18 56/0.000 + CDS 516978 - 517349 608 ## PROTEIN SUPPORTED gi|119025355|ref|YP_909200.1| 50S ribosomal protein L18 474 274 Op 19 . + CDS 517346 - 518071 1195 ## PROTEIN SUPPORTED gi|119025356|ref|YP_909201.1| 30S ribosomal protein S5 475 274 Op 20 . + CDS 518068 - 518253 302 ## PROTEIN SUPPORTED gi|119025357|ref|YP_909202.1| 50S ribosomal protein L30 476 274 Op 21 53/0.000 + CDS 518256 - 518702 752 ## PROTEIN SUPPORTED gi|119025358|ref|YP_909203.1| 50S ribosomal protein L15 + Term 518733 - 518788 21.9 + Prom 518828 - 518887 1.6 477 275 Op 1 28/0.000 + CDS 518931 - 520268 828 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 + Term 520275 - 520331 15.3 + Prom 520274 - 520333 1.8 478 275 Op 2 6/0.000 + CDS 520386 - 520946 866 ## COG0563 Adenylate kinase and related kinases + Term 520980 - 521040 19.1 + Prom 520983 - 521042 2.7 479 276 Op 1 . + CDS 521094 - 521312 285 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 480 276 Op 2 . + CDS 521336 - 521449 200 ## PROTEIN SUPPORTED gi|23466153|ref|NP_696756.1| 50S ribosomal protein L36 481 277 Op 1 48/0.000 + CDS 521553 - 521963 687 ## PROTEIN SUPPORTED gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 482 277 Op 2 32/0.000 + CDS 522048 - 522446 667 ## PROTEIN SUPPORTED gi|119025364|ref|YP_909209.1| 30S ribosomal protein S11 483 277 Op 3 50/0.000 + CDS 522527 - 523525 1442 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 484 277 Op 4 4/0.018 + CDS 523614 - 524081 761 ## PROTEIN SUPPORTED gi|119025366|ref|YP_909211.1| 50S ribosomal protein L17 + Term 524094 - 524146 13.7 485 278 Tu 1 . + CDS 524188 - 525108 845 ## COG0101 Pseudouridylate synthase + Prom 525163 - 525222 1.6 486 279 Op 1 7/0.000 + CDS 525285 - 527465 2840 ## COG2308 Uncharacterized conserved protein 487 279 Op 2 . + CDS 527570 - 528370 994 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases + Term 528519 - 528561 -0.2 - TRNA 528471 - 528556 58.1 # Ser CGA 0 0 - Term 528416 - 528466 6.2 488 280 Tu 1 . - CDS 528677 - 529561 697 ## BAD_0352 hypothetical protein 489 281 Op 1 20/0.000 + CDS 529639 - 530691 551 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 490 281 Op 2 32/0.000 + CDS 530904 - 533699 2989 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) 491 281 Op 3 26/0.000 + CDS 533809 - 534312 713 ## COG0858 Ribosome-binding factor A 492 281 Op 4 12/0.000 + CDS 534296 - 535366 1128 ## COG0130 Pseudouridine synthase 493 281 Op 5 . + CDS 535436 - 536665 1572 ## COG0196 FAD synthase - Term 536638 - 536669 0.5 494 282 Tu 1 . - CDS 536796 - 538214 1283 ## COG1066 Predicted ATP-dependent serine protease - Prom 538345 - 538404 1.5 495 283 Op 1 . + CDS 538364 - 539008 711 ## BAD_0359 hypothetical protein + Prom 539097 - 539156 1.7 496 283 Op 2 . + CDS 539183 - 539272 145 ## + Term 539309 - 539350 10.2 - Term 539296 - 539336 6.2 497 284 Tu 1 . - CDS 539407 - 540105 1158 ## COG0120 Ribose 5-phosphate isomerase - Prom 540133 - 540192 2.2 - Term 540267 - 540321 17.0 498 285 Op 1 . - CDS 540326 - 541663 1373 ## COG0328 Ribonuclease HI 499 285 Op 2 9/0.000 - CDS 541768 - 543156 1480 ## COG2972 Predicted signal transduction protein with a C-terminal ATPase domain 500 285 Op 3 . - CDS 543158 - 543973 824 ## COG3279 Response regulator of the LytR/AlgR family - Term 544107 - 544157 15.2 501 286 Tu 1 . - CDS 544189 - 545844 2408 ## COG0033 Phosphoglucomutase - Prom 546021 - 546080 3.0 + Prom 545912 - 545971 2.2 502 287 Op 1 7/0.000 + CDS 546186 - 548279 2877 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 503 287 Op 2 . + CDS 548311 - 549159 761 ## COG3711 Transcriptional antiterminator + Term 549231 - 549278 0.3 504 288 Tu 1 . - CDS 549214 - 550401 1315 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Prom 550467 - 550526 3.2 505 289 Tu 1 . + CDS 550496 - 551821 1872 ## COG0172 Seryl-tRNA synthetase + Term 551853 - 551905 15.1 + TRNA 552051 - 552135 59.4 # Ser TGA 0 0 - Term 552134 - 552175 9.6 506 290 Op 1 19/0.000 - CDS 552221 - 552901 866 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 507 290 Op 2 . - CDS 552955 - 554454 1329 ## COG4585 Signal transduction histidine kinase 508 291 Op 1 . + CDS 554568 - 556481 1427 ## BAD_0372 hypothetical protein 509 291 Op 2 . + CDS 556478 - 557092 700 ## BAD_0373 hypothetical protein + Term 557183 - 557212 0.3 - Term 556794 - 556835 3.4 510 292 Tu 1 . - CDS 557051 - 558868 1448 ## BAD_0374 hypothetical protein - Prom 558976 - 559035 2.5 - Term 559036 - 559084 3.7 511 293 Tu 1 . - CDS 559182 - 560336 1366 ## COG2814 Arabinose efflux permease - Prom 560530 - 560589 3.9 - TRNA 560443 - 560519 80.2 # Pro CGG 0 0 512 294 Tu 1 . + CDS 560615 - 562294 2568 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 562443 - 562487 8.2 + Prom 562583 - 562642 2.3 513 295 Op 1 . + CDS 562859 - 563743 201 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 514 295 Op 2 . + CDS 563896 - 564636 976 ## COG0588 Phosphoglycerate mutase 1 + Term 564690 - 564743 16.0 - Term 564678 - 564731 11.2 515 296 Tu 1 . - CDS 564863 - 566743 2351 ## COG4716 Myosin-crossreactive antigen - Prom 566789 - 566848 2.9 516 297 Tu 1 . + CDS 566759 - 566992 73 ## + Term 567230 - 567265 2.2 - Term 566980 - 567031 18.1 517 298 Tu 1 . - CDS 567064 - 567744 839 ## COG0704 Phosphate uptake regulator + Prom 567728 - 567787 4.6 518 299 Tu 1 . + CDS 567944 - 569116 1131 ## COG0642 Signal transduction histidine kinase + Term 569157 - 569203 15.2 - Term 569145 - 569190 15.0 519 300 Op 1 . - CDS 569237 - 569491 419 ## BAD_0382 hypothetical protein 520 300 Op 2 . - CDS 569518 - 570660 1630 ## COG1932 Phosphoserine aminotransferase + Prom 570737 - 570796 4.1 521 301 Op 1 . + CDS 570867 - 571799 818 ## COG3942 Surface antigen 522 301 Op 2 . + CDS 571862 - 572611 701 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 572631 - 572670 7.1 + Prom 572662 - 572721 2.8 523 302 Tu 1 . + CDS 572773 - 573807 1341 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Term 573840 - 573889 19.3 524 303 Tu 1 . - CDS 573912 - 574325 594 ## COG1765 Predicted redox protein, regulator of disulfide bond formation 525 304 Op 1 16/0.000 + CDS 574582 - 575454 1038 ## COG0207 Thymidylate synthase 526 304 Op 2 . + CDS 575533 - 576198 791 ## COG0262 Dihydrofolate reductase 527 304 Op 3 . + CDS 576205 - 576708 632 ## COG0394 Protein-tyrosine-phosphatase 528 304 Op 4 . + CDS 576729 - 577193 -86 ## - TRNA 577164 - 577240 86.2 # Asp GTC 0 0 - Term 577295 - 577343 3.0 529 305 Tu 1 . - CDS 577369 - 578379 1460 ## COG1087 UDP-glucose 4-epimerase - Prom 578474 - 578533 3.7 + Prom 578425 - 578484 3.3 530 306 Tu 1 . + CDS 578547 - 579431 931 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase + TRNA 579577 - 579648 53.7 # Glu TTC 0 0 + TRNA 579674 - 579747 77.9 # Asp GTC 0 0 + TRNA 579771 - 579846 80.0 # Phe GAA 0 0 + Prom 580144 - 580203 2.3 531 307 Tu 1 . + CDS 580265 - 581416 1753 ## COG1454 Alcohol dehydrogenase, class IV - Term 581451 - 581502 8.0 532 308 Tu 1 . - CDS 581548 - 582474 912 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 533 309 Op 1 . + CDS 582529 - 584052 1615 ## COG0628 Predicted permease 534 309 Op 2 . + CDS 584052 - 585275 1709 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 535 309 Op 3 . + CDS 585374 - 586819 1523 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 536 309 Op 4 11/0.000 + CDS 586900 - 587463 569 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 537 309 Op 5 4/0.018 + CDS 587460 - 589559 1181 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 538 309 Op 6 4/0.018 + CDS 589559 - 590194 705 ## COG0302 GTP cyclohydrolase I 539 309 Op 7 5/0.018 + CDS 590263 - 591141 1283 ## COG0294 Dihydropteroate synthase and related enzymes 540 309 Op 8 . + CDS 591226 - 592776 1280 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 541 309 Op 9 . + CDS 592773 - 593348 614 ## BDP_0553 hypothetical protein + Term 593476 - 593501 -0.5 - Term 593325 - 593361 5.0 542 310 Tu 1 . - CDS 593374 - 594339 1010 ## COG1946 Acyl-CoA thioesterase - Term 594415 - 594455 5.3 543 311 Tu 1 . - CDS 594503 - 596179 2541 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Prom 596314 - 596373 1.6 544 312 Tu 1 . + CDS 596511 - 596738 164 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase + Term 596777 - 596810 1.0 545 313 Op 1 . - CDS 596894 - 597319 553 ## COG0242 N-formylmethionyl-tRNA deformylase 546 313 Op 2 . - CDS 597309 - 597623 65 ## 547 314 Tu 1 . + CDS 597471 - 598280 708 ## COG0117 Pyrimidine deaminase + Term 598303 - 598341 -1.0 - Term 598201 - 598249 2.1 548 315 Tu 1 . - CDS 598488 - 599996 1181 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 549 316 Tu 1 . + CDS 600783 - 601139 117 ## BAD_0420 hypothetical protein + Term 601328 - 601366 4.4 - Term 601316 - 601354 5.2 550 317 Tu 1 . - CDS 601365 - 602645 1625 ## COG2873 O-acetylhomoserine sulfhydrylase - Term 602697 - 602746 3.1 551 318 Tu 1 . - CDS 602771 - 602956 132 ## + Prom 602756 - 602815 5.6 552 319 Tu 1 . + CDS 602882 - 604228 2062 ## COG2115 Xylose isomerase + Term 604421 - 604470 10.5 553 320 Tu 1 . - CDS 604375 - 604638 90 ## + Prom 604511 - 604570 2.2 554 321 Tu 1 . + CDS 604619 - 606316 1014 ## COG3507 Beta-xylosidase 555 322 Tu 1 . - CDS 606449 - 607468 703 ## COG1609 Transcriptional regulators - Prom 607595 - 607654 8.9 556 323 Tu 1 . + CDS 607425 - 607574 81 ## + Prom 607578 - 607637 6.1 557 324 Op 1 35/0.000 + CDS 607826 - 609100 1635 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 609129 - 609174 6.1 558 324 Op 2 38/0.000 + CDS 609201 - 610244 1315 ## COG1175 ABC-type sugar transport systems, permease components 559 324 Op 3 1/0.132 + CDS 610244 - 611137 829 ## COG0395 ABC-type sugar transport system, permease component + Term 611156 - 611199 9.0 560 325 Op 1 . + CDS 611214 - 612845 1833 ## COG3507 Beta-xylosidase + Term 612851 - 612904 8.1 561 325 Op 2 . + CDS 612936 - 614882 1313 ## BAD_0429 putative secreted protein + Prom 615679 - 615738 2.6 562 326 Tu 1 . + CDS 615936 - 616172 60 ## BAD_0430 putative esterase + Term 616269 - 616311 -0.6 563 327 Tu 1 . + CDS 616372 - 617016 822 ## COG0110 Acetyltransferase (isoleucine patch superfamily) 564 328 Tu 1 . - CDS 617219 - 618739 1947 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 618798 - 618857 2.6 + Prom 618760 - 618819 3.0 565 329 Tu 1 . + CDS 618909 - 620141 195 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase 566 330 Tu 1 . - CDS 620163 - 620810 741 ## BDP_2157 hypothetical protein - Prom 620879 - 620938 3.3 + Prom 620812 - 620871 2.0 567 331 Tu 1 . + CDS 620994 - 621365 576 ## COG0395 ABC-type sugar transport system, permease component + Prom 621369 - 621428 1.9 568 332 Tu 1 . + CDS 621556 - 623184 2491 ## BDP_2154 extracellular solute-binding protein + Term 623192 - 623219 -0.8 569 333 Tu 1 . + CDS 623454 - 624881 1832 ## COG1472 Beta-glucosidase-related glycosidases 570 334 Tu 1 . + CDS 625030 - 626400 1700 ## COG1874 Beta-galactosidase + Term 626468 - 626507 5.1 - Term 626449 - 626500 17.7 571 335 Tu 1 . - CDS 626569 - 629337 3916 ## Dtox_0422 cell wall/surface repeat-containing protein 572 336 Op 1 . + CDS 629501 - 629605 65 ## 573 336 Op 2 . + CDS 629670 - 630581 187 ## PROTEIN SUPPORTED gi|116517028|ref|YP_816079.1| glucokinase + Term 630722 - 630769 2.8 - Term 630594 - 630640 8.5 574 337 Op 1 . - CDS 630719 - 631522 1089 ## BAD_0437 TetR-type transcriptional regulator 575 337 Op 2 . - CDS 631594 - 632412 720 ## COG0657 Esterase/lipase - Term 632509 - 632572 5.2 576 338 Op 1 . - CDS 632630 - 633574 1314 ## COG3459 Cellobiose phosphorylase 577 338 Op 2 . - CDS 633627 - 634901 1723 ## COG3459 Cellobiose phosphorylase - Prom 635117 - 635176 78.1 + TRNA 635100 - 635173 82.8 # Ile TAT 0 0 + Prom 635101 - 635160 77.9 578 339 Op 1 10/0.000 + CDS 635355 - 635567 392 ## PROTEIN SUPPORTED gi|119025458|ref|YP_909303.1| 50S ribosomal protein L31 + Term 635592 - 635627 6.5 579 339 Op 2 32/0.000 + CDS 635749 - 636837 1490 ## COG0216 Protein chain release factor A 580 339 Op 3 . + CDS 636847 - 637767 293 ## PROTEIN SUPPORTED gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase + Term 637963 - 637997 -0.0 581 340 Op 1 20/0.000 + CDS 638013 - 639209 1920 ## COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component + Term 639244 - 639284 9.1 582 340 Op 2 24/0.000 + CDS 639384 - 640310 1447 ## COG0559 Branched-chain amino acid ABC-type transport system, permease components 583 340 Op 3 19/0.000 + CDS 640315 - 641436 1680 ## COG4177 ABC-type branched-chain amino acid transport system, permease component 584 340 Op 4 18/0.000 + CDS 641433 - 642245 247 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 585 340 Op 5 . + CDS 642245 - 642949 293 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Term 642964 - 643012 11.2 586 341 Op 1 4/0.018 + CDS 643107 - 643769 672 ## COG0009 Putative translation factor (SUA5) 587 341 Op 2 . + CDS 643766 - 644944 1448 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase + Prom 644967 - 645026 3.5 588 341 Op 3 . + CDS 645082 - 646626 2065 ## COG0516 IMP dehydrogenase/GMP reductase + Term 646678 - 646733 19.5 - Term 646666 - 646719 13.2 589 342 Tu 1 . - CDS 646790 - 647824 1156 ## COG1609 Transcriptional regulators - Prom 648008 - 648067 4.7 + Prom 647960 - 648019 3.0 590 343 Tu 1 . + CDS 648156 - 649913 2298 ## COG0366 Glycosidases + Term 649999 - 650044 12.4 591 344 Op 1 . + CDS 650152 - 650805 932 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) 592 344 Op 2 . + CDS 650833 - 651732 1080 ## COG0561 Predicted hydrolases of the HAD superfamily 593 344 Op 3 . + CDS 651777 - 653192 1597 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 594 345 Tu 1 . - CDS 653207 - 653593 437 ## BDP_0629 hypothetical protein - Prom 653630 - 653689 3.4 + Prom 653606 - 653665 4.2 595 346 Tu 1 . + CDS 653756 - 655591 2524 ## COG0442 Prolyl-tRNA synthetase + Term 655632 - 655693 10.2 596 347 Tu 1 . + CDS 655985 - 656563 492 ## BAD_0457 hypothetical protein - Term 656506 - 656552 14.0 597 348 Tu 1 . - CDS 656602 - 658692 2834 ## COG3590 Predicted metalloendopeptidase - Prom 658816 - 658875 1.6 + Prom 658672 - 658731 1.8 598 349 Tu 1 . + CDS 658859 - 659596 1128 ## COG0024 Methionine aminopeptidase + Term 659607 - 659665 8.3 599 350 Tu 1 . + CDS 659737 - 661032 1774 ## COG0372 Citrate synthase 600 351 Op 1 . + CDS 661174 - 662166 1516 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase 601 351 Op 2 . + CDS 662216 - 662695 656 ## COG1576 Uncharacterized conserved protein 602 351 Op 3 . + CDS 662753 - 662884 118 ## + Term 662892 - 662931 4.0 603 352 Op 1 4/0.018 + CDS 663069 - 664199 1576 ## COG1186 Protein chain release factor B 604 352 Op 2 28/0.000 + CDS 664223 - 665461 1249 ## COG2884 Predicted ATPase involved in cell division 605 352 Op 3 . + CDS 665461 - 666384 1263 ## COG2177 Cell division protein + Term 666390 - 666434 5.2 606 352 Op 4 . + CDS 666472 - 667902 1620 ## COG3942 Surface antigen + Term 667934 - 667975 6.1 607 353 Tu 1 . + CDS 668031 - 668510 871 ## COG0691 tmRNA-binding protein + Prom 668539 - 668598 3.6 608 354 Op 1 9/0.000 + CDS 668637 - 669584 1511 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 669638 - 669676 -0.8 609 354 Op 2 9/0.000 + CDS 669698 - 670630 1327 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 670651 - 670703 13.1 + Prom 670697 - 670756 1.8 610 355 Op 1 31/0.000 + CDS 670818 - 671747 1568 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 611 355 Op 2 34/0.000 + CDS 671782 - 672765 1382 ## COG0765 ABC-type amino acid transport system, permease component 612 355 Op 3 . + CDS 672777 - 673571 260 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 613 356 Op 1 . - CDS 673890 - 675167 813 ## BLJ_0739 signal transduction histidine kinase-like protein 614 356 Op 2 . - CDS 675179 - 675880 631 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - Prom 676084 - 676143 2.1 + Prom 676138 - 676197 2.5 615 357 Op 1 . + CDS 676225 - 677379 589 ## BAD_0485 hypothetical protein 616 357 Op 2 . + CDS 677424 - 678074 193 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 617 357 Op 3 . + CDS 678134 - 679249 109 ## BAD_0487 hypothetical protein + Prom 679266 - 679325 2.3 618 358 Op 1 . + CDS 679371 - 679667 193 ## gi|154486930|ref|ZP_02028337.1| hypothetical protein BIFADO_00763 619 358 Op 2 . + CDS 679678 - 680178 410 ## gi|154486931|ref|ZP_02028338.1| hypothetical protein BIFADO_00764 620 359 Tu 1 . + CDS 680284 - 680967 417 ## gi|154486932|ref|ZP_02028339.1| hypothetical protein BIFADO_00765 621 360 Op 1 . + CDS 681195 - 682952 2356 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 622 360 Op 2 1/0.132 + CDS 682945 - 683733 512 ## COG0564 Pseudouridylate synthases, 23S RNA-specific 623 361 Tu 1 . + CDS 683842 - 685134 2022 ## COG3633 Na+/serine symporter + Term 685175 - 685214 8.2 + Prom 685230 - 685289 3.5 624 362 Tu 1 . + CDS 685324 - 686757 1691 ## COG1653 ABC-type sugar transport system, periplasmic component + Term 686782 - 686832 13.1 625 363 Op 1 . - CDS 686871 - 687641 1099 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor 626 363 Op 2 . - CDS 687733 - 689013 1376 ## COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase 627 364 Op 1 38/0.000 + CDS 689215 - 690870 2453 ## COG0747 ABC-type dipeptide transport system, periplasmic component 628 364 Op 2 49/0.000 + CDS 690886 - 691866 1215 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 629 364 Op 3 4/0.018 + CDS 691944 - 692801 820 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 630 364 Op 4 1/0.132 + CDS 692798 - 693628 385 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 631 364 Op 5 . + CDS 693621 - 694397 264 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 694421 - 694453 2.0 632 365 Op 1 8/0.000 + CDS 694833 - 695843 563 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 633 365 Op 2 . + CDS 695946 - 697127 1814 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 634 365 Op 3 . + CDS 697164 - 699188 2082 ## COG0514 Superfamily II DNA helicase 635 365 Op 4 . + CDS 699283 - 699768 708 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 636 365 Op 5 . + CDS 699855 - 700382 648 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Term 700411 - 700454 7.7 - Term 700394 - 700447 14.6 637 366 Tu 1 . - CDS 700463 - 701890 2201 ## COG0531 Amino acid transporters - Prom 702012 - 702071 4.2 + Prom 701993 - 702052 1.8 638 367 Op 1 . + CDS 702116 - 703483 1922 ## COG0787 Alanine racemase 639 367 Op 2 3/0.026 + CDS 703534 - 704793 1387 ## COG0232 dGTP triphosphohydrolase 640 368 Tu 1 . + CDS 705019 - 707106 2289 ## COG0358 DNA primase (bacterial type) + Term 707325 - 707363 0.3 + Prom 707269 - 707328 2.1 641 369 Op 1 . + CDS 707402 - 708595 1488 ## COG0471 Di- and tricarboxylate transporters + Term 708670 - 708717 7.3 + Prom 708635 - 708694 2.0 642 369 Op 2 . + CDS 708784 - 709773 1159 ## COG3238 Uncharacterized protein conserved in bacteria + Term 709908 - 709951 9.1 + TRNA 709827 - 709903 83.5 # Arg TCT 0 0 + Prom 709829 - 709888 79.6 643 370 Tu 1 . + CDS 709990 - 711978 2479 ## COG0480 Translation elongation factors (GTPases) + Term 711993 - 712039 6.4 - TRNA 712091 - 712166 76.4 # Gly GCC 0 0 - TRNA 712200 - 712272 79.4 # Val CAC 0 0 - TRNA 712318 - 712389 74.3 # Val GAC 0 0 644 371 Tu 1 . - CDS 712477 - 713142 705 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 713099 - 713158 1.8 645 372 Op 1 17/0.000 + CDS 713392 - 714048 1110 ## COG0765 ABC-type amino acid transport system, permease component 646 372 Op 2 34/0.000 + CDS 714035 - 714709 809 ## COG0765 ABC-type amino acid transport system, permease component 647 372 Op 3 16/0.000 + CDS 714702 - 715580 463 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 648 372 Op 4 . + CDS 715625 - 716530 1559 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain + Term 716583 - 716627 8.2 + Prom 716753 - 716812 3.0 649 373 Tu 1 . + CDS 716865 - 718988 1590 ## COG3345 Alpha-galactosidase + Term 719016 - 719069 17.1 650 374 Tu 1 . - CDS 719073 - 720074 704 ## COG1609 Transcriptional regulators 651 375 Op 1 35/0.000 + CDS 720223 - 721473 1605 ## COG1653 ABC-type sugar transport system, periplasmic component + Prom 721485 - 721544 1.9 652 375 Op 2 38/0.000 + CDS 721624 - 722529 1009 ## COG1175 ABC-type sugar transport systems, permease components 653 375 Op 3 4/0.018 + CDS 722544 - 723392 729 ## COG0395 ABC-type sugar transport system, permease component 654 375 Op 4 . + CDS 723438 - 725420 2414 ## COG3533 Uncharacterized protein conserved in bacteria + Term 725428 - 725481 16.1 655 376 Op 1 . + CDS 725672 - 728902 3764 ## Cthe_2137 cellulosome enzyme, dockerin type I + Term 729086 - 729126 7.5 + Prom 729080 - 729139 2.4 656 376 Op 2 . + CDS 729216 - 730541 1683 ## COG0477 Permeases of the major facilitator superfamily + Term 730588 - 730639 17.6 + Prom 730579 - 730638 1.9 657 377 Op 1 . + CDS 730819 - 731841 1252 ## COG1893 Ketopantoate reductase 658 377 Op 2 10/0.000 + CDS 731881 - 732756 1341 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 732781 - 732824 7.5 659 377 Op 3 32/0.000 + CDS 732892 - 733953 1369 ## COG1135 ABC-type metal ion transport system, ATPase component 660 377 Op 4 . + CDS 733959 - 734618 596 ## COG2011 ABC-type metal ion transport system, permease component 661 377 Op 5 . + CDS 734682 - 735860 924 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 735899 - 735935 1.1 662 378 Tu 1 . + CDS 736088 - 737323 1495 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Prom 737419 - 737478 3.4 663 379 Tu 1 . + CDS 737559 - 738515 1266 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 738661 - 738696 3.3 664 380 Op 1 . - CDS 738398 - 738694 129 ## 665 380 Op 2 . - CDS 738712 - 739143 628 ## BAD_0509 transposase - Prom 739370 - 739429 4.6 + Prom 739338 - 739397 3.0 666 381 Op 1 . + CDS 739435 - 740160 330 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 667 381 Op 2 . + CDS 740212 - 741384 1078 ## BAD_0511 hypothetical protein 668 381 Op 3 . + CDS 741459 - 742898 972 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 742926 - 742969 8.0 669 382 Tu 1 . - CDS 743015 - 744919 1972 ## COG1154 Deoxyxylulose-5-phosphate synthase - Prom 745115 - 745174 2.9 670 383 Op 1 . + CDS 744797 - 745057 90 ## gi|154486984|ref|ZP_02028391.1| hypothetical protein BIFADO_00821 671 383 Op 2 . + CDS 745094 - 746095 1217 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases 672 383 Op 3 29/0.000 + CDS 746149 - 746646 758 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 673 383 Op 4 . + CDS 746630 - 747805 1484 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 674 383 Op 5 . + CDS 747817 - 748215 447 ## COG0735 Fe2+/Zn2+ uptake regulation proteins 675 384 Tu 1 . + CDS 748361 - 750433 2871 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily + Term 750624 - 750669 0.2 - Term 750517 - 750566 16.3 676 385 Op 1 2/0.079 - CDS 750598 - 751860 1804 ## COG0151 Phosphoribosylamine-glycine ligase - Term 751903 - 751941 6.0 677 385 Op 2 13/0.000 - CDS 751951 - 752985 871 ## PROTEIN SUPPORTED gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase 678 385 Op 3 . - CDS 753005 - 754519 1955 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 679 385 Op 4 . - CDS 754575 - 754820 119 ## + Prom 754620 - 754679 2.1 680 386 Op 1 . + CDS 754752 - 756383 1158 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair 681 386 Op 2 . + CDS 756380 - 756607 289 ## BDP_0722 hypothetical protein + Term 756650 - 756697 15.7 - Term 756637 - 756685 12.1 682 387 Op 1 2/0.079 - CDS 756719 - 760453 5572 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain - Prom 760474 - 760533 2.5 - Term 760515 - 760565 9.1 683 387 Op 2 . - CDS 760573 - 761325 1171 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 684 388 Tu 1 . - CDS 761461 - 762714 1377 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Prom 762649 - 762708 1.5 685 389 Tu 1 . + CDS 762750 - 763916 1271 ## COG0438 Glycosyltransferase + Term 763954 - 764003 8.5 - Term 763945 - 763988 9.1 686 390 Tu 1 . - CDS 764008 - 765033 1482 ## COG2008 Threonine aldolase 687 391 Op 1 . + CDS 765032 - 765313 77 ## gi|154487001|ref|ZP_02028408.1| hypothetical protein BIFADO_00838 + Term 765393 - 765433 6.2 - TRNA 765139 - 765214 74.6 # His GTG 0 0 688 391 Op 2 . + CDS 765479 - 766540 1750 ## COG0385 Predicted Na+-dependent transporter + Term 766561 - 766616 18.0 689 392 Tu 1 . - CDS 766435 - 766806 239 ## - Prom 767041 - 767100 2.2 + Prom 767003 - 767062 2.1 690 393 Op 1 56/0.000 + CDS 767276 - 767647 622 ## PROTEIN SUPPORTED gi|119025548|ref|YP_909393.1| 30S ribosomal protein S12 691 393 Op 2 51/0.000 + CDS 767653 - 768123 787 ## PROTEIN SUPPORTED gi|119025549|ref|YP_909394.1| 30S ribosomal protein S7 692 393 Op 3 30/0.000 + CDS 768154 - 770283 2962 ## COG0480 Translation elongation factors (GTPases) + Term 770287 - 770338 -0.7 + Prom 770339 - 770398 1.6 693 393 Op 4 . + CDS 770452 - 771651 1274 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 + Term 771694 - 771741 6.5 + Prom 771726 - 771785 3.8 694 394 Op 1 6/0.000 + CDS 771832 - 772395 833 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 695 394 Op 2 . + CDS 772417 - 772860 544 ## COG0781 Transcription termination factor + Prom 772862 - 772921 1.6 696 395 Op 1 24/0.000 + CDS 772948 - 774165 1648 ## COG0505 Carbamoylphosphate synthase small subunit 697 395 Op 2 3/0.026 + CDS 774158 - 777538 4656 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 698 395 Op 3 . + CDS 777541 - 778479 1099 ## COG0284 Orotidine-5'-phosphate decarboxylase 699 395 Op 4 . + CDS 778540 - 779127 506 ## COG0194 Guanylate kinase + Term 779163 - 779220 20.5 - Term 779148 - 779208 17.4 700 396 Tu 1 . - CDS 779215 - 781068 2427 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 701 397 Tu 1 . + CDS 781073 - 781573 508 ## COG1758 DNA-directed RNA polymerase, subunit K/omega 702 398 Op 1 2/0.079 + CDS 781747 - 782961 1677 ## COG0192 S-adenosylmethionine synthetase 703 398 Op 2 . + CDS 783020 - 785251 1479 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase 704 398 Op 3 . + CDS 785318 - 786028 974 ## COG1011 Predicted hydrolase (HAD superfamily) + Term 786055 - 786112 6.6 705 399 Tu 1 . + CDS 786133 - 787095 1069 ## COG0223 Methionyl-tRNA formyltransferase + Term 787295 - 787327 -0.3 - Term 787009 - 787046 -0.8 706 400 Tu 1 . - CDS 787247 - 787897 684 ## COG0560 Phosphoserine phosphatase 707 401 Op 1 . + CDS 787986 - 789551 1856 ## COG0464 ATPases of the AAA+ class 708 401 Op 2 . + CDS 789623 - 791206 1448 ## BAD_0547 proteasome-associated protein 709 402 Op 1 . + CDS 791341 - 792171 842 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 710 402 Op 2 . + CDS 792266 - 792457 281 ## BDP_0754 hypothetical protein 711 402 Op 3 . + CDS 792457 - 793923 1240 ## BAD_0549 proteasome-associated protein + Term 793925 - 793979 12.2 - Term 793918 - 793962 10.9 712 403 Op 1 . - CDS 793997 - 794797 862 ## BAD_0550 hypothetical protein 713 403 Op 2 . - CDS 794794 - 795153 418 ## BAD_0551 MarR-type transcriptional regulator - Prom 795180 - 795239 5.6 - Term 795229 - 795275 13.2 714 404 Op 1 . - CDS 795297 - 795578 410 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 795662 - 795721 1.9 715 404 Op 2 . - CDS 795733 - 798168 2419 ## COG0392 Predicted integral membrane protein - Prom 798228 - 798287 3.0 716 405 Op 1 . - CDS 798316 - 799770 1947 ## COG0015 Adenylosuccinate lyase 717 405 Op 2 . - CDS 799798 - 800970 876 ## BAD_0555 hypothetical protein + Prom 800808 - 800867 1.9 718 406 Tu 1 . + CDS 800969 - 801214 100 ## + Term 801232 - 801283 -0.8 719 407 Tu 1 . - CDS 801354 - 801557 120 ## BAD_0556 hypothetical protein - Prom 801761 - 801820 3.3 720 408 Tu 1 . + CDS 801726 - 801929 109 ## + Term 801946 - 801983 1.2 721 409 Op 1 . - CDS 801830 - 802402 591 ## BAD_0557 cell surface elastin binding protein EbpS 722 409 Op 2 . - CDS 802399 - 803418 815 ## BAD_0558 hypothetical protein 723 409 Op 3 . - CDS 803415 - 804482 723 ## BAD_0559 hypothetical protein 724 409 Op 4 . - CDS 804483 - 805007 385 ## BAD_0560 hypothetical protein 725 409 Op 5 . - CDS 805004 - 805957 552 ## BAD_0561 hypothetical protein 726 409 Op 6 . - CDS 805954 - 807021 1013 ## COG0714 MoxR-like ATPases 727 409 Op 7 . - CDS 807040 - 807744 471 ## COG0692 Uracil DNA glycosylase - Prom 807878 - 807937 1.8 + Prom 807810 - 807869 3.6 728 410 Op 1 . + CDS 807897 - 808595 739 ## BAD_0564 hypothetical protein + Term 808620 - 808661 7.0 + Prom 808710 - 808769 2.6 729 410 Op 2 . + CDS 808870 - 810486 1490 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 810525 - 810572 12.4 - Term 810423 - 810468 6.7 730 411 Op 1 . - CDS 810591 - 810881 317 ## BAD_0566 hypothetical protein 731 411 Op 2 . - CDS 810894 - 811190 170 ## 732 412 Op 1 . + CDS 811120 - 811854 621 ## BAD_0567 hypothetical protein 733 412 Op 2 40/0.000 + CDS 811858 - 812589 901 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 734 412 Op 3 1/0.132 + CDS 812598 - 814445 1429 ## COG0642 Signal transduction histidine kinase 735 413 Op 1 . + CDS 814597 - 814989 327 ## COG1278 Cold shock proteins 736 413 Op 2 . + CDS 814996 - 816408 1389 ## BAD_0571 hypothetical protein + Term 816417 - 816479 20.0 - Term 816301 - 816338 2.2 737 414 Tu 1 . - CDS 816486 - 817493 993 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 817519 - 817578 1.6 738 415 Tu 1 . + CDS 817633 - 820227 2390 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 + Term 820275 - 820329 19.3 - Term 820263 - 820317 19.3 739 416 Tu 1 . - CDS 820421 - 821848 1801 ## BAD_0574 hypothetical protein - Prom 821943 - 822002 3.3 740 417 Op 1 13/0.000 + CDS 821963 - 823354 1712 ## COG0124 Histidyl-tRNA synthetase 741 417 Op 2 . + CDS 823402 - 825201 2572 ## COG0173 Aspartyl-tRNA synthetase + Term 825224 - 825277 13.2 + Prom 825216 - 825275 5.2 742 418 Op 1 16/0.000 + CDS 825350 - 826900 1838 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 743 418 Op 2 1/0.132 + CDS 826897 - 827637 549 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 + Prom 827687 - 827746 1.7 744 419 Op 1 16/0.000 + CDS 827772 - 828569 254 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 745 419 Op 2 31/0.000 + CDS 828606 - 829448 1073 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 746 419 Op 3 17/0.000 + CDS 829448 - 830125 972 ## COG0765 ABC-type amino acid transport system, permease component 747 419 Op 4 . + CDS 830132 - 831259 1422 ## COG0765 ABC-type amino acid transport system, permease component + Term 831284 - 831332 12.7 748 420 Tu 1 . + CDS 831378 - 832379 1046 ## COG2326 Uncharacterized conserved protein - Term 832307 - 832348 -0.8 749 421 Op 1 . - CDS 832361 - 834919 3257 ## COG4581 Superfamily II RNA helicase 750 421 Op 2 . - CDS 834930 - 835190 85 ## 751 422 Tu 1 . + CDS 835132 - 836403 1554 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 752 423 Tu 1 . + CDS 836542 - 838053 1934 ## COG0477 Permeases of the major facilitator superfamily 753 424 Op 1 5/0.018 + CDS 838159 - 838779 845 ## COG0740 Protease subunit of ATP-dependent Clp proteases 754 424 Op 2 24/0.000 + CDS 838782 - 839483 1067 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Term 839514 - 839559 14.0 755 425 Tu 1 . + CDS 839588 - 840901 266 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 + TRNA 840989 - 841065 81.8 # Arg ACG 0 0 + TRNA 841107 - 841180 73.5 # Arg ACG 0 0 756 426 Tu 1 . + CDS 841370 - 842731 1391 ## COG3004 Na+/H+ antiporter + Term 842754 - 842791 9.4 - Term 842778 - 842807 1.6 757 427 Op 1 . - CDS 842827 - 843498 653 ## COG4122 Predicted O-methyltransferase 758 427 Op 2 36/0.000 - CDS 843500 - 844417 919 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 759 427 Op 3 . - CDS 844476 - 846332 1820 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 760 427 Op 4 2/0.079 - CDS 846401 - 847702 1031 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 761 427 Op 5 2/0.079 - CDS 847702 - 849231 1018 ## COG0606 Predicted ATPase with chaperone activity 762 427 Op 6 . - CDS 849231 - 849683 292 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 763 428 Tu 1 . - CDS 849853 - 850728 837 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase - Prom 850880 - 850939 2.8 764 429 Tu 1 . + CDS 851059 - 852369 2074 ## COG2873 O-acetylhomoserine sulfhydrylase + Term 852390 - 852447 13.4 + Prom 852419 - 852478 3.1 765 430 Tu 1 . + CDS 852603 - 853154 909 ## COG4720 Predicted membrane protein + Term 853176 - 853232 12.7 + Prom 853170 - 853229 4.1 766 431 Op 1 34/0.000 + CDS 853312 - 854937 441 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 767 431 Op 2 . + CDS 854937 - 855749 1130 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 768 431 Op 3 . + CDS 855759 - 856778 860 ## BAD_0602 regulatory proteins + Term 856788 - 856828 -0.8 + Prom 856796 - 856855 1.7 769 432 Op 1 36/0.000 + CDS 856952 - 857743 252 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 770 432 Op 2 . + CDS 857785 - 860427 2384 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 860472 - 860506 7.6 771 433 Op 1 . - CDS 860469 - 860570 67 ## 772 433 Op 2 19/0.000 - CDS 860601 - 861350 766 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 773 433 Op 3 . - CDS 861427 - 864036 1211 ## COG4585 Signal transduction histidine kinase 774 433 Op 4 . - CDS 864047 - 864157 63 ## gi|212716973|ref|ZP_03325101.1| hypothetical protein BIFCAT_01919 775 434 Op 1 . + CDS 864214 - 865557 1275 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 776 434 Op 2 . + CDS 865618 - 866418 942 ## COG0345 Pyrroline-5-carboxylate reductase 777 434 Op 3 . + CDS 866436 - 867530 1545 ## COG0012 Predicted GTPase, probable translation factor + Term 867551 - 867611 10.3 + Prom 867623 - 867682 2.3 778 435 Tu 1 . + CDS 867770 - 869047 1078 ## COG0582 Integrase + Term 869063 - 869106 15.2 - Term 869045 - 869099 20.1 779 436 Op 1 . - CDS 869111 - 869524 645 ## BBPR_0901 phage protein 780 436 Op 2 . - CDS 869521 - 869718 175 ## COG1724 Predicted periplasmic or secreted lipoprotein - Prom 869911 - 869970 3.3 + Prom 869687 - 869746 5.0 781 437 Op 1 . + CDS 869853 - 870773 542 ## BAD_1370 ImpB/MucB/SamB family protein 782 437 Op 2 . + CDS 870775 - 871302 412 ## BAD_1371 Na+/H+-dicarboxylate symporter + Term 871326 - 871366 10.0 - Term 871312 - 871354 9.4 783 438 Op 1 . - CDS 871363 - 871569 264 ## BBIF_0115 hypothetical protein 784 438 Op 2 . - CDS 871566 - 871730 68 ## gi|154487099|ref|ZP_02028506.1| hypothetical protein BIFADO_00939 - Prom 871830 - 871889 1.7 + Prom 871765 - 871824 3.9 785 439 Op 1 . + CDS 871854 - 873002 1032 ## EUBREC_2367 hypothetical protein 786 439 Op 2 . + CDS 872999 - 873769 766 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) + Term 873784 - 873839 13.3 - Term 873778 - 873819 4.1 787 440 Tu 1 . - CDS 873857 - 874324 671 ## Blon_1147 hypothetical protein - Prom 874383 - 874442 2.1 - Term 874401 - 874460 4.6 788 441 Tu 1 . - CDS 874474 - 874800 297 ## BLIF_0724 hypothetical protein - Prom 874936 - 874995 2.3 789 442 Tu 1 . - CDS 875067 - 876509 663 ## COG5324 Uncharacterized conserved protein 790 443 Tu 1 . - CDS 876645 - 877415 658 ## BLIF_0729 hypothetical protein 791 444 Tu 1 . - CDS 877594 - 877764 167 ## BBMN68_669 protein - Prom 877960 - 878019 2.6 + Prom 877712 - 877771 2.1 792 445 Op 1 . + CDS 878002 - 879171 544 ## BBMN68_668 protein 793 445 Op 2 . + CDS 879164 - 880672 567 ## BBMN68_667 protein + Term 880691 - 880738 11.7 - Term 880492 - 880525 -0.9 794 446 Tu 1 . - CDS 880762 - 881127 558 ## COG3304 Predicted membrane protein - Prom 881333 - 881392 1.6 795 447 Tu 1 . + CDS 881315 - 881500 59 ## BLIF_0731 hypothetical protein + Term 881599 - 881644 0.2 796 448 Op 1 . + CDS 881731 - 883782 1930 ## COG0477 Permeases of the major facilitator superfamily 797 448 Op 2 . + CDS 883810 - 884046 234 ## BLLJ_0698 transport protein + Term 884130 - 884180 2.2 - Term 883968 - 884001 2.8 798 449 Tu 1 . - CDS 884063 - 884488 248 ## BLIF_0734 hypothetical protein - Prom 884606 - 884665 1.8 + Prom 884926 - 884985 1.7 799 450 Tu 1 . + CDS 885039 - 885290 122 ## BAD_0610 hypothetical protein 800 451 Op 1 . + CDS 885419 - 887422 1860 ## COG0370 Fe2+ transport system protein B 801 451 Op 2 . + CDS 887428 - 887760 56 ## BAD_0612 peptidase 802 451 Op 3 . + CDS 887808 - 888632 1033 ## BAD_0613 hypothetical protein 803 452 Tu 1 . + CDS 888735 - 889682 1114 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 804 453 Tu 1 . - CDS 889679 - 890743 1345 ## COG2855 Predicted membrane protein - Prom 890874 - 890933 1.6 + Prom 890824 - 890883 1.9 805 454 Op 1 . + CDS 890921 - 891835 1210 ## COG2768 Uncharacterized Fe-S center protein 806 454 Op 2 . + CDS 891847 - 892467 420 ## BDP_0831 phosphoribulokinase (uridine kinase family protein) 807 454 Op 3 . + CDS 892513 - 893103 1014 ## BDP_0832 hypothetical protein + Term 893147 - 893188 10.1 + Prom 893115 - 893174 2.8 808 455 Tu 1 . + CDS 893224 - 894063 1022 ## COG0730 Predicted permeases + Term 894070 - 894132 14.2 - Term 894227 - 894272 2.5 809 456 Tu 1 . - CDS 894436 - 895362 884 ## COG0582 Integrase 810 457 Op 1 27/0.000 + CDS 896004 - 898565 2529 ## COG0286 Type I restriction-modification system methyltransferase subunit 811 457 Op 2 . + CDS 898567 - 899784 257 ## COG0732 Restriction endonuclease S subunits 812 457 Op 3 . + CDS 899793 - 900440 300 ## PROTEIN SUPPORTED gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 813 457 Op 4 . + CDS 900452 - 900868 609 ## EUBREC_0883 hypothetical protein 814 457 Op 5 . + CDS 900865 - 901359 292 ## COG3236 Uncharacterized protein conserved in bacteria 815 457 Op 6 . + CDS 901421 - 901726 157 ## gi|154487138|ref|ZP_02028545.1| hypothetical protein BIFADO_00978 816 457 Op 7 . + CDS 901627 - 901941 58 ## Acfer_1175 restriction modification system DNA specificity domain protein 817 457 Op 8 . + CDS 901965 - 905147 3525 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 818 457 Op 9 . + CDS 905159 - 905905 949 ## COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 819 458 Tu 1 . + CDS 906129 - 906941 835 ## BAD_0620 hypothetical protein + Term 907012 - 907059 4.0 + Prom 906974 - 907033 4.5 820 459 Tu 1 . + CDS 907089 - 908390 659 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 908420 - 908460 10.1 + Prom 908454 - 908513 4.3 821 460 Op 1 . + CDS 908548 - 909258 1033 ## COG0300 Short-chain dehydrogenases of various substrate specificities + Term 909318 - 909348 2.0 822 460 Op 2 . + CDS 909356 - 911542 2490 ## COG0513 Superfamily II DNA and RNA helicases - Term 911555 - 911601 4.0 823 461 Op 1 4/0.018 - CDS 911627 - 912415 1053 ## COG0390 ABC-type uncharacterized transport system, permease component 824 461 Op 2 . - CDS 912412 - 913143 189 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 913278 - 913337 2.5 825 462 Op 1 3/0.026 + CDS 913325 - 914725 1388 ## COG0627 Predicted esterase 826 462 Op 2 . + CDS 914776 - 917364 2859 ## COG2898 Uncharacterized conserved protein + Term 917381 - 917422 9.2 + Prom 917384 - 917443 3.9 827 463 Tu 1 . + CDS 917485 - 918933 2084 ## COG0362 6-phosphogluconate dehydrogenase + Term 918961 - 919024 23.2 - Term 919388 - 919433 6.3 828 464 Op 1 4/0.018 - CDS 919456 - 920247 912 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 829 464 Op 2 5/0.018 - CDS 920283 - 921230 1069 ## COG3429 Glucose-6-P dehydrogenase subunit 830 464 Op 3 . - CDS 921227 - 922798 1882 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 831 465 Tu 1 . + CDS 922879 - 924327 1933 ## COG0534 Na+-driven multidrug efflux pump 832 466 Tu 1 . - CDS 924317 - 925111 600 ## COG0300 Short-chain dehydrogenases of various substrate specificities 833 467 Tu 1 . + CDS 925289 - 925912 554 ## COG0350 Methylated DNA-protein cysteine methyltransferase - Term 925806 - 925857 13.4 834 468 Op 1 . - CDS 925881 - 926396 439 ## COG0716 Flavodoxins 835 468 Op 2 . - CDS 926464 - 927669 1178 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 836 468 Op 3 . - CDS 927690 - 928580 832 ## BAD_0636 hypothetical protein - Prom 928602 - 928661 2.6 - Term 928628 - 928678 17.4 837 469 Tu 1 . - CDS 928718 - 929233 797 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) + Prom 929238 - 929297 2.9 838 470 Op 1 8/0.000 + CDS 929502 - 930248 937 ## COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) 839 470 Op 2 . + CDS 930245 - 930583 369 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) 840 471 Tu 1 . - CDS 930614 - 931867 1051 ## COG1472 Beta-glucosidase-related glycosidases 841 472 Op 1 . + CDS 931997 - 935233 4580 ## COG1615 Uncharacterized conserved protein 842 472 Op 2 . + CDS 935298 - 935852 652 ## COG1247 Sortase and related acyltransferases 843 472 Op 3 7/0.000 + CDS 935926 - 936525 857 ## COG0193 Peptidyl-tRNA hydrolase 844 472 Op 4 1/0.132 + CDS 936515 - 940081 3887 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) + Prom 940112 - 940171 2.4 845 473 Op 1 . + CDS 940205 - 941503 1945 ## COG0148 Enolase + Term 941543 - 941584 9.4 846 473 Op 2 . + CDS 941586 - 942134 470 ## BAD_0646 hypothetical protein 847 473 Op 3 4/0.018 + CDS 942136 - 942708 603 ## COG1507 Uncharacterized conserved protein 848 473 Op 4 . + CDS 942721 - 943716 1126 ## COG0248 Exopolyphosphatase + Term 943786 - 943854 30.4 + TRNA 943764 - 943843 55.8 # Leu TAA 0 0 849 474 Tu 1 . - CDS 943974 - 944474 441 ## Blon_1573 hypothetical protein - Prom 944666 - 944725 9.0 + Prom 944640 - 944699 7.9 850 475 Tu 1 . + CDS 944788 - 945573 743 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) - Term 945559 - 945599 2.7 851 476 Op 1 . - CDS 945616 - 946203 424 ## gi|154487176|ref|ZP_02028583.1| hypothetical protein BIFADO_01017 852 476 Op 2 . - CDS 946196 - 946666 299 ## BBIF_1146 hypothetical protein 853 476 Op 3 . - CDS 946629 - 946991 531 ## BBIF_0070 hypothetical protein - Prom 947069 - 947128 2.5 854 477 Op 1 . + CDS 947110 - 947238 202 ## gi|154487179|ref|ZP_02028586.1| hypothetical protein BIFADO_01020 855 477 Op 2 . + CDS 947226 - 947474 246 ## BBPR_0881 hypothetical protein 856 477 Op 3 . + CDS 947499 - 947585 99 ## 857 477 Op 4 . + CDS 947582 - 947812 248 ## gi|154487181|ref|ZP_02028588.1| hypothetical protein BIFADO_01022 858 477 Op 5 . + CDS 947809 - 948003 246 ## gi|154487182|ref|ZP_02028589.1| hypothetical protein BIFADO_01023 859 477 Op 6 . + CDS 948000 - 948356 349 ## gi|154487183|ref|ZP_02028590.1| hypothetical protein BIFADO_01024 860 477 Op 7 . + CDS 948349 - 948579 312 ## BBPR_0888 hypothetical protein + Term 948730 - 948790 -0.9 861 478 Op 1 . + CDS 949020 - 949325 420 ## gi|154487186|ref|ZP_02028593.1| hypothetical protein BIFADO_01027 862 478 Op 2 . + CDS 949322 - 949540 102 ## gi|154487187|ref|ZP_02028594.1| hypothetical protein BIFADO_01028 863 478 Op 3 . + CDS 949537 - 949716 100 ## gi|154487188|ref|ZP_02028595.1| hypothetical protein BIFADO_01029 864 478 Op 4 . + CDS 949713 - 950357 687 ## gi|154487189|ref|ZP_02028596.1| hypothetical protein BIFADO_01030 865 478 Op 5 . + CDS 950354 - 950530 207 ## gi|154487190|ref|ZP_02028597.1| hypothetical protein BIFADO_01031 866 478 Op 6 3/0.026 + CDS 950532 - 951494 1053 ## COG5377 Phage-related protein, predicted endonuclease 867 478 Op 7 . + CDS 951498 - 952361 1061 ## COG3723 Recombinational DNA repair protein (RecE pathway) 868 478 Op 8 . + CDS 952361 - 952846 606 ## COG0629 Single-stranded DNA-binding protein 869 478 Op 9 . + CDS 952846 - 953013 71 ## gi|154487194|ref|ZP_02028601.1| hypothetical protein BIFADO_01035 870 478 Op 10 . + CDS 953010 - 953402 359 ## gi|154487195|ref|ZP_02028602.1| hypothetical protein BIFADO_01036 871 478 Op 11 . + CDS 953405 - 953905 509 ## gi|154487196|ref|ZP_02028603.1| hypothetical protein BIFADO_01037 872 478 Op 12 . + CDS 953908 - 954129 248 ## gi|154487197|ref|ZP_02028604.1| hypothetical protein BIFADO_01038 873 478 Op 13 . + CDS 954126 - 954611 468 ## ECL_01668 putative DNA N-4 cytosine methyltransferase 874 478 Op 14 . + CDS 954608 - 954793 105 ## gi|154487199|ref|ZP_02028606.1| hypothetical protein BIFADO_01040 875 478 Op 15 . + CDS 954808 - 955056 273 ## gi|154487200|ref|ZP_02028607.1| hypothetical protein BIFADO_01041 876 478 Op 16 . + CDS 955053 - 955532 459 ## Elen_0814 hypothetical protein 877 478 Op 17 . + CDS 955529 - 955849 304 ## BLIF_0865 hypothetical protein + Prom 955926 - 955985 2.5 878 479 Op 1 . + CDS 956121 - 956402 190 ## gi|154487203|ref|ZP_02028610.1| hypothetical protein BIFADO_01044 879 479 Op 2 . + CDS 956402 - 956611 295 ## gi|154487205|ref|ZP_02028612.1| hypothetical protein BIFADO_01046 880 479 Op 3 . + CDS 956608 - 956955 147 ## gi|154487206|ref|ZP_02028613.1| hypothetical protein BIFADO_01047 881 480 Op 1 . + CDS 957060 - 957914 645 ## BLIF_0857 hypothetical protein 882 480 Op 2 . + CDS 957911 - 958198 167 ## gi|154487208|ref|ZP_02028615.1| hypothetical protein BIFADO_01049 883 480 Op 3 . + CDS 958195 - 958356 279 ## gi|154487209|ref|ZP_02028616.1| hypothetical protein BIFADO_01050 884 480 Op 4 . + CDS 958358 - 958573 85 ## gi|154487210|ref|ZP_02028617.1| hypothetical protein BIFADO_01051 885 480 Op 5 . + CDS 958574 - 958990 336 ## COG0756 dUTPase 886 480 Op 6 . + CDS 959010 - 959384 369 ## gi|154487212|ref|ZP_02028619.1| hypothetical protein BIFADO_01053 887 480 Op 7 . + CDS 959381 - 959623 376 ## gi|154487213|ref|ZP_02028620.1| hypothetical protein BIFADO_01054 888 480 Op 8 . + CDS 959620 - 959937 322 ## gi|154487214|ref|ZP_02028621.1| hypothetical protein BIFADO_01055 889 480 Op 9 . + CDS 959944 - 960252 369 ## gi|154487215|ref|ZP_02028622.1| hypothetical protein BIFADO_01056 890 480 Op 10 . + CDS 960245 - 960559 213 ## gi|154487216|ref|ZP_02028623.1| hypothetical protein BIFADO_01057 891 480 Op 11 . + CDS 960556 - 961272 693 ## BL0923 hypothetical protein + Term 961291 - 961329 6.2 - Term 961279 - 961317 7.2 892 481 Op 1 . - CDS 961353 - 962216 739 ## COG4974 Site-specific recombinase XerD 893 481 Op 2 . - CDS 962204 - 963079 431 ## Achl_4261 hypothetical protein 894 481 Op 3 . - CDS 963081 - 963611 499 ## gi|154487220|ref|ZP_02028627.1| hypothetical protein BIFADO_01061 895 481 Op 4 . - CDS 963611 - 963874 177 ## gi|154487221|ref|ZP_02028628.1| hypothetical protein BIFADO_01062 896 481 Op 5 . - CDS 963880 - 964236 224 ## gi|154487222|ref|ZP_02028629.1| hypothetical protein BIFADO_01063 897 481 Op 6 . - CDS 964325 - 964525 249 ## gi|154487223|ref|ZP_02028630.1| hypothetical protein BIFADO_01064 898 481 Op 7 . - CDS 964527 - 965660 934 ## BLIF_0838 hypothetical protein 899 481 Op 8 . - CDS 965728 - 966066 327 ## gi|154487225|ref|ZP_02028632.1| hypothetical protein BIFADO_01066 900 481 Op 9 . - CDS 966059 - 966523 464 ## gi|154487226|ref|ZP_02028633.1| hypothetical protein BIFADO_01067 901 481 Op 10 . - CDS 966614 - 966913 142 ## gi|154487227|ref|ZP_02028634.1| hypothetical protein BIFADO_01068 902 481 Op 11 . - CDS 966924 - 967310 382 ## gi|154487228|ref|ZP_02028635.1| hypothetical protein BIFADO_01069 - Prom 967333 - 967392 2.6 - Term 967387 - 967430 12.4 903 482 Tu 1 . - CDS 967482 - 967697 312 ## BBIF_0015 hypothetical protein with the helix-turn-helix motif - Term 968104 - 968154 2.5 904 483 Tu 1 . - CDS 968166 - 968453 144 ## + TRNA 968998 - 969069 50.3 # Trp CCA 0 0 + TRNA 969193 - 969277 61.2 # Ser GCT 0 0 + TRNA 969400 - 969481 58.9 # Leu CAA 0 0 905 484 Tu 1 . - CDS 969473 - 969763 56 ## gi|154487230|ref|ZP_02028637.1| hypothetical protein BIFADO_01074 906 485 Tu 1 . + CDS 969916 - 970404 264 ## gi|154487231|ref|ZP_02028638.1| hypothetical protein BIFADO_01075 907 486 Op 1 . + CDS 970512 - 970904 308 ## BLIF_0829 hypothetical protein 908 486 Op 2 . + CDS 970904 - 972778 1420 ## BLIF_0828 phage protein 909 486 Op 3 . + CDS 972807 - 974402 1256 ## Blon_1549 hypothetical protein 910 486 Op 4 . + CDS 974402 - 975487 755 ## Blon_1550 hypothetical protein 911 486 Op 5 . + CDS 975512 - 976093 532 ## gi|154487236|ref|ZP_02028643.1| hypothetical protein BIFADO_01080 912 486 Op 6 . + CDS 976112 - 976639 917 ## Blon_1552 hypothetical protein + Term 976663 - 976692 1.1 913 487 Op 1 . + CDS 976707 - 977777 1062 ## Blon_1553 hypothetical protein 914 487 Op 2 . + CDS 977792 - 978229 322 ## Blon_1554 hypothetical protein 915 487 Op 3 . + CDS 978232 - 978759 414 ## Blon_1555 hypothetical protein 916 487 Op 4 . + CDS 978734 - 979087 208 ## gi|154487241|ref|ZP_02028648.1| hypothetical protein BIFADO_01085 917 487 Op 5 . + CDS 979084 - 979548 340 ## Blon_1557 hypothetical protein 918 487 Op 6 . + CDS 979602 - 980213 716 ## Blon_1558 hypothetical protein 919 488 Op 1 . + CDS 980378 - 980800 348 ## Blon_1559 hypothetical protein 920 488 Op 2 . + CDS 980851 - 981189 390 ## Blon_1560 hypothetical protein 921 488 Op 3 . + CDS 981209 - 985924 4405 ## Blon_1561 hypothetical protein 922 488 Op 4 . + CDS 985937 - 986830 571 ## Blon_1562 hypothetical protein 923 488 Op 5 . + CDS 986870 - 992110 5195 ## Blon_1825 fibronectin, type III domain protein 924 488 Op 6 . + CDS 992123 - 992692 413 ## gi|154487249|ref|ZP_02028656.1| hypothetical protein BIFADO_01093 925 488 Op 7 . + CDS 992704 - 993018 419 ## gi|154487251|ref|ZP_02028658.1| hypothetical protein BIFADO_01095 + Term 993041 - 993080 9.8 926 489 Op 1 . + CDS 993090 - 993263 241 ## gi|154487252|ref|ZP_02028659.1| hypothetical protein BIFADO_01096 927 489 Op 2 . + CDS 993247 - 993744 535 ## gi|154487253|ref|ZP_02028660.1| hypothetical protein BIFADO_01097 928 489 Op 3 . + CDS 993772 - 994140 298 ## gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 Predicted protein(s) >gi|148337405|gb|DS264454.1| GENE 1 126 - 365 224 79 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MWFKRRRNEYGCPMCGRLPVIKASQTEKYHESRKVRTTLTVYRLQCSRGHISTSWFSHAA LASRQWKELVDEYKGKDTK >gi|148337405|gb|DS264454.1| GENE 2 442 - 693 400 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486233|ref|ZP_02027640.1| ## NR: gi|154486233|ref|ZP_02027640.1| hypothetical protein BIFADO_00036 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00036 [Bifidobacterium adolescentis L2-32] # 1 83 1 83 83 146 100.0 6e-34 MSDRVKVGTSKVTFRVRAFDYPQIELASVEVDVPMYTKTDNKLDNMQQGYVTADVPDGFN EKVKDALQVFADTLQASFNEEGE >gi|148337405|gb|DS264454.1| GENE 3 690 - 899 112 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486234|ref|ZP_02027641.1| ## NR: gi|154486234|ref|ZP_02027641.1| hypothetical protein BIFADO_00037 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00037 [Bifidobacterium adolescentis L2-32] # 1 69 1 69 69 135 100.0 1e-30 MNVFTGKTGYIVWPQGEMGRHTCRVYESLDEAVGAAHSKADFHHRPYDVRTAYESPVRTI KTINPRRHQ >gi|148337405|gb|DS264454.1| GENE 4 896 - 1099 243 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486235|ref|ZP_02027642.1| ## NR: gi|154486235|ref|ZP_02027642.1| hypothetical protein BIFADO_00038 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00038 [Bifidobacterium adolescentis L2-32] # 1 67 1 67 67 117 100.0 4e-25 MNRDRVIIVAIICMTIIFIASTVSPAGSSGKTGTGFQMETVKTGDVTWACLKHNGEYVGC NTVETVK >gi|148337405|gb|DS264454.1| GENE 5 1099 - 1479 397 126 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0972 NR:ns ## KEGG: HMPREF0424_0972 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 7 126 4 122 125 63 33.0 2e-09 MTDNINPSHYKDGPFECIELSRLLSSDWGQAVQYCFRWQHKNGVEDLKKALWFINDAITH NVPFFAACCKRNADILEAQAIRLLGILQAENWADLEQFWRNLKWGDRVDVLEALTDKINE IEKDGE >gi|148337405|gb|DS264454.1| GENE 6 1824 - 2180 184 118 aa, chain - ## HITS:1 COG:XF1774 KEGG:ns NR:ns ## COG: XF1774 COG0270 # Protein_GI_number: 15838375 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Xylella fastidiosa 9a5c # 47 99 471 522 537 79 67.0 2e-15 MALTFKIRGGGTGGGKGFLGQEELSATLSTRNDQFLHTEDSMNGLTVRRLTPLECERLQG FPDGWTDIPWKGKKHAPDSPRYKALGNSMAVPVMRWIGEGIQLVEDNKGLFQENPSEQ >gi|148337405|gb|DS264454.1| GENE 7 2180 - 2299 68 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCSADSQANAARCFNLAPTLMAHAGKDAPFIYPTADGRD >gi|148337405|gb|DS264454.1| GENE 8 2256 - 2678 209 140 aa, chain - ## HITS:1 COG:no KEGG:Blon_1526 NR:ns ## KEGG: Blon_1526 # Name: not_defined # Def: DNA-cytosine methyltransferase (EC:2.1.1.37) # Organism: B.longum_infantis_ATCC15697 # Pathway: Cysteine and methionine metabolism [PATH:bln00270]; Metabolic pathways [PATH:bln01100] # 1 129 227 374 401 225 77.0 5e-58 MYAADGVMPTLQAREHGGQNQQAVMLDFHQQDGRFKVSNHPEVSNTLTSHMGTGGNNVPL VKAFNPTLSTDHNPAVYEVAGNIIGRGAMNGGNQLGVADPDENGAFTLTSTDRHAVVEIE RERERSDVQCGQSGERGTVL >gi|148337405|gb|DS264454.1| GENE 9 2705 - 3346 199 213 aa, chain - ## HITS:1 COG:XF1774 KEGG:ns NR:ns ## COG: XF1774 COG0270 # Protein_GI_number: 15838375 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Xylella fastidiosa 9a5c # 3 132 19 158 537 127 51.0 1e-29 MKYISLFSGIEAATVAWQTLGWEPVAYAEIEPFPKAVLKHHYPNVPDLGDMTKVNWKEYH HAADVVVGGSPCQAFSIAGLRKALDDPRGQLMLEYLRACAEIDPEWIVWENVPGVLSAER GRAFQSLLEAVAELWPDGGVHGECWTLSSSVWPNDASVCSLSSTLETGGVPPRFFLSAKA CAGILRRAERRGKPLPVELRTSLETQIHTLENA >gi|148337405|gb|DS264454.1| GENE 10 3346 - 4143 395 265 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0859 NR:ns ## KEGG: BLIF_0859 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 146 1 146 291 95 37.0 3e-18 MARRGYVQLVNGFYDNDKVRDLVRIGRADSVGVFCMALSLCGDRLTDGFVPRRAMLSNIG ATQEQVQALVDEGMLEEVDDGWIIHDYTAHNRTKEQVMHARADAKARKSKSRGHSTVTAV SQRDMRVTSGQTPEHQNTRTQKKEEEYYSSSKEMTLAMFQDSRELAAANSMMRATYPNLD LQDAWNAFSVRHYARISTVGDWIRLWRGWCENRAQMGGIPPSKPHVHTWACEHTLKALHL QSQDDVTDMASAVKKANELNQKEEP >gi|148337405|gb|DS264454.1| GENE 11 4162 - 4455 140 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLYSIQIASCLGVVTGRPSQLKTMPLPQCGFAIASRASAISTKSGGGSSFITVPFANDF QRRLVRVCGLVGVVGVPVSSVVWIVGGALRPECFPVL >gi|148337405|gb|DS264454.1| GENE 12 4306 - 4662 142 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486244|ref|ZP_02027651.1| ## NR: gi|154486244|ref|ZP_02027651.1| hypothetical protein BIFADO_00047 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00047 [Bifidobacterium adolescentis L2-32] # 1 118 1 118 118 243 100.0 3e-63 MIFPAVNVNGIHLSSQQHEALVSIWRTGRMPEPHAGQKPWLWIQALRRRGLVSGNALRLT DKGRHIVQLLQDRKAFRSQSTADNPHYGAYWDAYYADQSTYPYKPTLEIICERNCDET >gi|148337405|gb|DS264454.1| GENE 13 4659 - 5114 395 151 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486245|ref|ZP_02027652.1| ## NR: gi|154486245|ref|ZP_02027652.1| hypothetical protein BIFADO_00048 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00048 [Bifidobacterium adolescentis L2-32] # 11 151 1 141 141 292 100.0 6e-78 MSETSLNTGEMLFQLRVWDYLAWALDDKRLDHVENLYYKGRPISVSTFANPNVPMVKCFD KAELSAGDIDSEYPFVIQADGMFDADVMDEREWIASQPAYTSLSVWDKFETLLPAKPSVE CVDSGTRMFIRFTLGELAGMLNSGLPLGGGR >gi|148337405|gb|DS264454.1| GENE 14 5086 - 5607 366 173 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1041 NR:ns ## KEGG: BLIF_1041 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 10 145 13 147 158 111 46.0 1e-23 MGFMTYDFDIPGEPVAKGRPRFYGYRAVTPQHTRDAEELVRNQFHMFYPHAEPLDGDVMM ILMFYKGRHGKPDLDNLEKLVKDALNGLAYVDDQQVKLTLCAMLEPDRMAWGQRAKRLVK RRQGMPLTYGGNPYEPHTEIHIEPLHDIHGGLESLVRNTKEMISDVGNQPEYR >gi|148337405|gb|DS264454.1| GENE 15 5595 - 5738 89 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVPLSGITEPAWCDKHGVEYYGPTCPECESEAEDYWDDIGDASIWDL >gi|148337405|gb|DS264454.1| GENE 16 5738 - 6616 962 292 aa, chain - ## HITS:1 COG:TM0328 KEGG:ns NR:ns ## COG: TM0328 COG0863 # Protein_GI_number: 15643096 # Func_class: L Replication, recombination and repair # Function: DNA modification methylase # Organism: Thermotoga maritima # 21 292 81 325 329 84 25.0 2e-16 MVDEMYMTDEAKGKDWTLWLGDSCERMTEMADNSVDLSVSSPPFASLYVYSDSTRDLGNN SSREEFIENYGYIIRELLRVTKPGRIACVHVQQVVTTKTADGVVGLTDFRGDVIRAYVEN GWIFHGEVTVNKNPQAQAIRTKAQALMFVTKNKDSSMSRPALADYLLMFRKPGENQVPIK NDVSNEEWIDWAQPVWWNIRETNTLNERLGRENTDERHICPLQLDFIERCIRLWSNKGEL VFDPFGGIGSTVYEAIKLGRKGMSIELKPSYWDASVNLMRDLEEKLGEATLF >gi|148337405|gb|DS264454.1| GENE 17 6616 - 7935 1073 439 aa, chain - ## HITS:1 COG:no KEGG:Dred_1192 NR:ns ## KEGG: Dred_1192 # Name: not_defined # Def: helicase domain-containing protein # Organism: D.reducens # Pathway: not_defined # 7 427 3 417 456 378 47.0 1e-103 MANIIPYREFLKRKELREQETGITVSPQQLHPSLFDWQKRIVAWACKVGRAAIWADTGLG KTRMQLEWLRQVCAGHGTGLILAPLAVCQQTIREGAAIGMEVRYVHDQSEVSDGFSITNY ERVPKLDVSKFNAVVLDEASILKQSDGKTRKMLIDTFRDTKYRLACTATPAPNDPEELCN QAEFLGYATRVKMLATYFVHDGNIWRLKGHAVKPMMRWMSQWAIALRKPSDIGGDDAGYE LPGLNQTVDVVAYHGSIPEGQLFAADLGGVGGRARVRKETLVDRVSRCVDLVNNEPEEQW IIWAGLNDEADMLNRLIPGSVNVKGSMSPEDKAKAFLDFADGNIPVLITKGSMASFGLNW QNCARMAFCGLNDSWESYYQSIRRCYRFGQKRVVDVHVVVSDLEREIAENITRKEQQATH LSDELVKTMNESNSFGKAA >gi|148337405|gb|DS264454.1| GENE 18 7957 - 8502 606 181 aa, chain - ## HITS:1 COG:ML2684 KEGG:ns NR:ns ## COG: ML2684 COG0629 # Protein_GI_number: 15828449 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium leprae # 1 119 1 119 168 137 57.0 1e-32 MAGETVITIIGNLTREPELRSTSNGENVANFTIASSDRRFNRQTNQWEDGDTLFMNCSVW GGMAQHVAQSLHKGMGVIAQGRLKQRSYQANDGTQRTVVELRVDEIGPSLRNATAQVQRI QRGGAQAAPQGGFNPSPNNVPSNGFQQPQQPTQQPQQGADSWGANNNQPSTFGNFGNDTD F >gi|148337405|gb|DS264454.1| GENE 19 8502 - 9068 544 188 aa, chain - ## HITS:1 COG:no KEGG:Blon_1503 NR:ns ## KEGG: Blon_1503 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 4 187 3 190 194 153 45.0 4e-36 MGNVIPKNRKAYGYDYADLGSVVNYVTEVLGFRVEQDIHYNNLPQYPNGYGFVVTHYWQD FSKSWSEYAAPVPIIVGDSAGKREQPFMQRYGSAETYARRYSLLTLFCLATSDDDGQLAG YQRGNPMNEELRKQVAALLAQGNIPAGRESEAIGNRIKMPVNYARLTDWQAQLFINSFKK NEEVKEAA >gi|148337405|gb|DS264454.1| GENE 20 9056 - 9883 995 275 aa, chain - ## HITS:1 COG:no KEGG:Blon_1502 NR:ns ## KEGG: Blon_1502 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 4 263 6 272 283 224 48.0 3e-57 MVDMPDKEYFAHPAIDQTGLKKFMESPRAYAWHKLNPLDNSTLAFGKAAHSLILGSGPKV ERKLDGRTKAGKAQAEQAKSDDLVILSGSDYEKLQNMVDYAPDMNSLVEGKPEIALFAID PATGLELKGKADWLPDHPGMDGVMWLYDYKTTGHDVQDFTGSAYKFGYHIQAAFYMMLYR LVTGYQGAMGFRFVVQEKQEPYDWMIWELSENDPEISLVAVKQIREALDRLSFYWKNHIP LEDMLNQGLPKNPLPIRFTDWQMNHLIGDDDQWEM >gi|148337405|gb|DS264454.1| GENE 21 9904 - 10293 422 129 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486252|ref|ZP_02027659.1| ## NR: gi|154486252|ref|ZP_02027659.1| hypothetical protein BIFADO_00055 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00055 [Bifidobacterium adolescentis L2-32] # 1 129 1 129 129 258 100.0 8e-68 MDTINVNGETYTKVPDEISLFGRTYLLADDTIPEPLDVSDWHPIEPDYRITLREYMTQQH PEDAKRNLTGLGQVVKNVVLNAGKGDLLEENSNGAIIYTRSLFPLVEQGYRKWRYRNNAH IMERSVAEV >gi|148337405|gb|DS264454.1| GENE 22 10464 - 10727 147 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLAVNPFRSGSNGFASFIGVNPNRFDSCCGHCPHRLVRLPDWGFDVDWMTRGLWFFFPYG SRVRLPPTSEAVERRPIIIENPVDGGA >gi|148337405|gb|DS264454.1| GENE 23 10997 - 11227 306 76 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0888 NR:ns ## KEGG: BBPR_0888 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 76 1 73 79 96 61.0 3e-19 MTDHDYWLEDMQAMKKRKKPNYTRRRILFAIASIGLISSLTIMLTWHGGSTTAALMVEGV YIATALWLIVRFTPRD >gi|148337405|gb|DS264454.1| GENE 24 11220 - 11579 315 119 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486254|ref|ZP_02027661.1| ## NR: gi|154486254|ref|ZP_02027661.1| hypothetical protein BIFADO_00057 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00057 [Bifidobacterium adolescentis L2-32] # 1 119 1 119 119 216 100.0 5e-55 MNDSVLVKLDRLFDKLKTASDEDDWNTVRSLVAQIASLVKVDEKQLPEEPKEQGFYVTAN DGRLLLKDIDDDWSVRTYDNSAKRIWNGGRQYAKWPEVCAQLPPEAFPLKRVNTGSDDD >gi|148337405|gb|DS264454.1| GENE 25 11572 - 11934 268 120 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486255|ref|ZP_02027662.1| ## NR: gi|154486255|ref|ZP_02027662.1| hypothetical protein BIFADO_00058 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00058 [Bifidobacterium adolescentis L2-32] # 1 120 1 120 120 233 100.0 3e-60 MTGAQPDVAWSVQTGIDLDAMLAAQRDWIERVRRKTKRDYQQQDKPVLKRVYESLRMKYE TGFSTSSYKIADDLQLAQSVVYRKLRKLVSYGLAETFLTHGRHCFRPTGLEPTKGFDWNE >gi|148337405|gb|DS264454.1| GENE 26 11931 - 12137 202 68 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486256|ref|ZP_02027663.1| ## NR: gi|154486256|ref|ZP_02027663.1| hypothetical protein BIFADO_00059 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00059 [Bifidobacterium adolescentis L2-32] # 1 68 1 68 68 114 100.0 3e-24 MTDRKVVVEEEIFDRQEAARYLKLGADKFDKLYRVCADYQGGKTVTYKKSKLLDRYDQVC ESPREVSA >gi|148337405|gb|DS264454.1| GENE 27 12147 - 12350 137 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486257|ref|ZP_02027664.1| ## NR: gi|154486257|ref|ZP_02027664.1| hypothetical protein BIFADO_00060 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00060 [Bifidobacterium adolescentis L2-32] # 1 67 1 67 67 140 100.0 3e-32 MTLLNPPAPPHEFVLDEGGHCVFRINERKGGSIVEKDGLKTSTLYEIPESKLGAFIQWAA DVHGQSR >gi|148337405|gb|DS264454.1| GENE 28 12347 - 13138 607 263 aa, chain - ## HITS:1 COG:lin0080_1 KEGG:ns NR:ns ## COG: lin0080_1 COG3617 # Protein_GI_number: 16799158 # Func_class: K Transcription # Function: Prophage antirepressor # Organism: Listeria innocua # 3 130 2 128 129 100 44.0 4e-21 MNTEIQRFDFKGESLRALTNMAGEPWFVAKDACDILGIDTNHLREALDDDEITNLRNSEV WNQPGRAPLIISEPGLYKLIMRSRKPEAKEFQRWVTHEVLPSIRKHGAYMTQQTLDKALT SPDFLIQLATKLKEEQEKVKELEPKAKALDDFTNVPDALLVRDAAKLLSNDSNIQIGEHE LRQWLVDNGWIYRQSNQSWCAASSRVRQGHMVMVSSRSHGIHKDGTPFAYPPTPKLTRKG LALIHQRLSEQSFERVLDAEVAA >gi|148337405|gb|DS264454.1| GENE 29 13149 - 13706 552 185 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0855 NR:ns ## KEGG: BLIF_0855 # Name: not_defined # Def: phage protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 185 1 227 227 244 59.0 1e-63 MKITTPHGTLEGDNIEAILKEHGYDCLHGADLRYANLHGADLSDADLSYADLSDVDLSDA NHVKLSIAKISILPDEGDIIGWKKAYVDGTMLPKSVIVKLLIPSDAQRSNATGRKCRASK ARVLDLQDKQGNSLPPDTTAYSGHDTDFTYKKGETIHVEDFDTNRWKECAPGIHFFITRI EAVEY >gi|148337405|gb|DS264454.1| GENE 30 13744 - 13968 309 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486260|ref|ZP_02027667.1| ## NR: gi|154486260|ref|ZP_02027667.1| hypothetical protein BIFADO_00063 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00063 [Bifidobacterium adolescentis L2-32] # 1 74 7 80 80 136 100.0 7e-31 MAEYKMQFRDGFLDRTKQMSGLKTDEAFAGAIGVSESVLARAKKTNECTPLMLIGLYKAF GFQPGEIAQIKQTA >gi|148337405|gb|DS264454.1| GENE 31 14107 - 14511 532 134 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486261|ref|ZP_02027668.1| ## NR: gi|154486261|ref|ZP_02027668.1| hypothetical protein BIFADO_00064 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00064 [Bifidobacterium adolescentis L2-32] # 1 134 4 137 137 247 100.0 2e-64 MDKKTYFAQLTHDAAINEISNKTGLSVSTLWRQYNKGCEFSAESVIIIARAYGENPVEAL VEFGYIRADEMAKGKTVARLHDASDDELLQELARRLKENADADWVNSPIIYREEFDMAAN DDPNARLEAETPED >gi|148337405|gb|DS264454.1| GENE 32 14578 - 14988 302 136 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0878 NR:ns ## KEGG: BBPR_0878 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 129 1 129 135 134 57.0 1e-30 MSRITIDVLERQAEAMHVRILETDMPGTTCGLYCDRLNTIWLADWLNDRQRLCTLCHELV HAKYRDLGCGTRFGVKCERRARRETALMLISPSEFAMAERTWDGDTWHMAAELDVTMRVL ADYRQILKDGLFAKRP >gi|148337405|gb|DS264454.1| GENE 33 15055 - 15417 380 120 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486263|ref|ZP_02027670.1| ## NR: gi|154486263|ref|ZP_02027670.1| hypothetical protein BIFADO_00066 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00066 [Bifidobacterium adolescentis L2-32] # 1 120 9 128 128 231 100.0 2e-59 MVPIFVIAGIAIGMAAFVLLIQMAVRNGIRMSGLIDWRTQYELERIDDADGGKPTLHELY EIAAKTDSAPDAIERNVRAKALDYIESRNSIHVRNCWIVIGVAVGVCFLAMIITLASSPM >gi|148337405|gb|DS264454.1| GENE 34 15773 - 16249 445 158 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486264|ref|ZP_02027671.1| ## NR: gi|154486264|ref|ZP_02027671.1| hypothetical protein BIFADO_00067 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00067 [Bifidobacterium adolescentis L2-32] # 1 158 1 158 158 314 100.0 1e-84 MGYKNMQAVYDVNRAGRMAIRRGDNMTLNKNAELVLMFMASQTYDWDSENNCPPKKLMDK KVPCRYYTLGWRAISDSLGMVMLTPEQAMGGNAEAKMKTRENSIQKSISDAWVFLRDRGI IKTIEPASLGKNAGFLLLLGDDAENAAVERWARECLGV >gi|148337405|gb|DS264454.1| GENE 35 16377 - 16499 98 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHEPSGTTKAATRHREPCGGLHRHNRNQQSQENPIKQVQP >gi|148337405|gb|DS264454.1| GENE 36 16960 - 18009 674 349 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229232313|ref|ZP_04356740.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Cryptobacterium curtum DSM 15641] # 1 328 512 841 860 264 43 4e-81 AAMSEPIVLGIESTCDETAAAVVQGRTLISNVVASSMDEHARYGGVIPEIASRAHAEAFV PCVSKALADANMTLSDVDAIAVSAGPGLAGCLAVGVSGAKSLAWAANKPIYGINHVIGHI AVTQLQFGPFPKDTLALIVSGGHTSLLHVEDVARHIDVVGTTLDDAAGECFDKVARLLGF PYPGGPHIDRHAQLGNPHAIKVPQGLTQGKAGQQHPYDFSFSGVKTAVARWIEQQQAEGN EIPIDDVCASLADSVATVLAKKAMRGCEQYGSKTLIVGGGFSANSQLRAKLLEVGAKHGV EVRIPQIKLCTDNGAMVAMLGVNLVESGVKPSEPDFAIDSAMPLTKISM >gi|148337405|gb|DS264454.1| GENE 37 18000 - 18542 346 180 aa, chain - ## HITS:1 COG:Cgl0577 KEGG:ns NR:ns ## COG: Cgl0577 COG0456 # Protein_GI_number: 19551827 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Corynebacterium glutamicum # 15 151 16 149 169 80 38.0 1e-15 MIVDHSQIPEDTAVGQIAALEKDLFGRGAWSEQSVRQEFHAPARTYLLDIEGDAVQTADP VVRGYTGYWYDGDDAEIMTIGVGRPYQRQGIAAALLETLIVSARRQGAKRMLLEVRVDNV PALALYERFGFTRMGLRKRYYQPEGIDAYTMSLDLEPRVVGFSATADTEHTSATHTTEQQ >gi|148337405|gb|DS264454.1| GENE 38 18553 - 19323 717 256 aa, chain - ## HITS:1 COG:Cgl0576 KEGG:ns NR:ns ## COG: Cgl0576 COG1214 # Protein_GI_number: 19551826 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Inactive homolog of metal-dependent proteases, putative molecular chaperone # Organism: Corynebacterium glutamicum # 5 242 17 212 225 76 30.0 4e-14 MQTLVIDTSYGSTVGVVGHEPIVETDSLTHVEKLQVNIAQAVEQAGLQASDITRIVVGVG PAPFTGLRAGIVAAKALAFATGAQLVGQDVLAPQCLAHTQATDDRRHLTLAVNDARRRQL YFALYDGGTVADGVGQSPITLIDMDIDYPDSITMRVNDVLMKLADTGKPYVVDVIGHGAV KYAQSWNAIASLGEVDDHALLDEGAEGLARFAAFTTSEQALAEPTPVEPLYLRRPDVSVP NPLKHVLNHAGAERTE >gi|148337405|gb|DS264454.1| GENE 39 19428 - 20000 686 190 aa, chain - ## HITS:1 COG:SP1944 KEGG:ns NR:ns ## COG: SP1944 COG0802 # Protein_GI_number: 15901768 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Streptococcus pneumoniae TIGR4 # 13 154 7 124 147 87 40.0 2e-17 MSNTITITAATGEDMQALGERLAKLARGGDVLLLSGPLGAGKTTFAQGFGAGLGIGEPIV SPTFTIARELEGRFADGSPAHLVHVDAYRLGGNSYAPGQDTVGRLLDELESLGLDEELED PGEHTVILMEWGEQMAAALAPERLEIHIDRPLDAPAVTADGELTSAGARTVTLVPVGAAW DSFDFTAGKR >gi|148337405|gb|DS264454.1| GENE 40 19997 - 21016 1074 339 aa, chain - ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 17 337 11 330 331 122 27.0 7e-28 MPVLSTDTARLNGMPKPSAATTPFHLVYGGDSYLNDQTVRDLKHEAQRRYPDAETIELDA ANADHYAFDEAVSPSLLADRAIVIVTNLQNADEKLGDAMVSYCRQACKEPADACIVICQH EGGVKGKRLVEQLTKAGAYKDAVADLKKPEAKLNFVMQCFERRKRRVEPMAAQQLVAVLG DRTGELAAMVGQLCFDFDDNPMTLDRVNQYLTSNPQVDGFRVADLALSGRTADAIIAMRS SVEQGTAPIALIGALAMKLRTMAKASAVRAGTISTAEAKTNPWVLKNATRQLSGWTSSGM SACIQMLAWADEQSKTNGSDPVYALERSIELISRKGRAA >gi|148337405|gb|DS264454.1| GENE 41 21020 - 22597 942 525 aa, chain - ## HITS:1 COG:Cgl2296 KEGG:ns NR:ns ## COG: Cgl2296 COG0658 # Protein_GI_number: 19553546 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Corynebacterium glutamicum # 189 423 175 398 554 71 27.0 4e-12 MLGALPAVLTCMIPLAVLAGLPFPRLPASVRRRITLWHASVTVCAIAAMVCAASALTYDL LQWRDPASRAAAEGDASVVVTARATSPTVISDRRSNDCRADARITSVTIDGVRQTSSARA RIYADRPECGKLKQDGTYKIVGRISEARYGAMPLWLTDVTTVEHVRPPNLPMRAIGMMQE AFFVQTARLSDQGKVLVPGLTLGVLGQDYVPAEGDGTDIDSTYAAQVEDAFQRSGIVHLM AVSGGHLAVTAALVRSVCSFFLLPRRFTALLVAMSYIMLSACVFPSDSVSRALLMGLSGA ACLFIGRRGQAMASLSWTTLAMLMACPHMSQSFEFALSCAAVLGIVLFADTLNAWMEPVL PRFVAEALSMTIAAQVFTLPIQVLIEPELPVFSIPANLMVAPFVGFATLAGLASLAVSWL IPWLGLQLARAASWGTAVMELTALELGSGSQATIPWAGGVGGAVLVCVVEAACAAAAIMT HRLFGQMMVQEPDLPGKRLIANPVERLRMWMERTRKALRELQWEE >gi|148337405|gb|DS264454.1| GENE 42 22729 - 23385 379 218 aa, chain - ## HITS:1 COG:L0316 KEGG:ns NR:ns ## COG: L0316 COG1555 # Protein_GI_number: 15673755 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Lactococcus lactis # 128 216 125 213 215 66 37.0 3e-11 MPEKPSRPNSLTAMEAQSDEPSASHEPARPMPQRKTHDAKPTLAELAGVRPTDKPDEGER PKRDRPRLAFRPFHALMAILTLSCALCASLTMLVQQTIHYSELQHSRSQIRSQAQQQPQQ APQTEQTPAPQENGPTQDASTPDSHDGQDGAQQSNQLDLNTADLGELQTLKGVGPVTAQR ILDYRTQIGRFDNVDQLLEVKGIGSKTLAKFRDQVCVR >gi|148337405|gb|DS264454.1| GENE 43 23636 - 26608 4556 990 aa, chain - ## HITS:1 COG:MT0047 KEGG:ns NR:ns ## COG: MT0047 COG0495 # Protein_GI_number: 15839418 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 9 987 14 968 969 991 54.0 0 MSDTEKSAQAQPNESVEPSFRYNAKLAQGIEEKWQKIWDDEGTFWAANVNGDLKDGKGHN AEGRPSYFAMDMFPYPSGKGLHVGHPLGYLATDVVSRYHRMKGENVLHAMGYDAFGLPAE QYAVQTGQHPRITTEQNIANMRRQLHRMGLSFDNRRSFATIDPGYVRWTQWIFSRIYDAW YDKDATNPSGSKGCARPISTLVEQFESGKRAIPGFEGKAWADLSEAEQADVLNDFRLAYI SKSPVNWCPGLGTVLANEEVTAEGKSERGNFPVFQRELRQWSMRITAYGHRLIEDLDTID WPEKVKLMQRNWIGESHGASVHFDVETPNGVKDMEIYTTRPDTLFGTTFAVVSPEHHLLE NVPAEWPAETPEDWKGGYATPVEAVKAYRLAAEAKTAKDRVDEAGEKTGLFTGLYAINPI TGAKLPLFTADYVLMDYGTGAIMAVPGGDQRDYDFAVKFGLPVIYTVKPLPESGDDLANY EGKAPFVSHDGIVINSSIDATKAKGDSLSLDGLRVDEAIDKVNAWLESAGVGKGTVSYRL RDWLFSRQRYWGEPFPIVYGEDGAPHLLPDEQLPINLPDVPDYSPKTFYPEDAESNPEAP LSRNEDWVKVELDLGDGKKTYYRDTNTMPNWAGSCWYYMRYLDPTDTKHMVEKDEFDYWM GPDHNKTAGKSGGVDLYIGGVEHAVLHLLYSRFWHKVLFDLGYVDSMEPFHKLFNQGMIQ AYAYTDDRGQYVPAAEVVEGPADANGEPTFTWNGQHANREFGKMGKSLKNIITPDDMYEN YGADTFRLYEMGMGPLAESRPWNTRNVVGSMRFLQRLWRNVIDETTGEVRVTDGELDTKT LKLLNNTIADVTVEMEAMRPNTAIAKLIVLNNHLTSLDAVPRAAVEPLILMLSPIAPHIC EELWSKLGHTESLAHADWPKADERYVGQDSVTAVVQIKGKVRAKLEVSPDIDPKELEKMA LEAVADRLGGKEPRKVIVKAPKIVSIVPAE >gi|148337405|gb|DS264454.1| GENE 44 26681 - 27562 1023 293 aa, chain - ## HITS:1 COG:BS_glnH KEGG:ns NR:ns ## COG: BS_glnH COG0834 # Protein_GI_number: 16079797 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 40 256 48 261 273 103 33.0 5e-22 MGKARYVAAAACAALLAAGAGACGTSVSVVTEGAAQGPTIAIGVAADQPGLGYLHGGEYS GFDIDVAKYVAKTLGYAEKQIVFKQLSPAMRASALTDGTVDMVVDSFSMDGTHDGEADVA GPYLTVREALLIRSDSASEITGTDSLSDKTVCAVAGSAADDNIRNRTKNIRTTVAERDTY PQCMTALMIGEADAVAADDAIAAGLASNNTGDHLKIVDVPDTTWSYGIAVKSGQDELVGQ IDAALRAMVKDGSWQKAAADMGKSIGYTPDASMNPPKATAKAPSSGTSAASEK >gi|148337405|gb|DS264454.1| GENE 45 27571 - 28512 1266 313 aa, chain - ## HITS:1 COG:CAC0294 KEGG:ns NR:ns ## COG: CAC0294 COG0598 # Protein_GI_number: 15893586 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Clostridium acetobutylicum # 8 312 15 315 315 263 46.0 3e-70 MFRTINGQVEQIQKPENGSWLCLSAPTDVELANVSMETGIDLADLRAPLDDEERSRVDVE DDYTMIIVDIPTVEERGGRDWYETIPLSIIITQSAIITVCMQDTPVLHPFMEGTIRGFNT YMKTRFILQILYRNATMYLRYLRIIDRESDKLELKLRHSMQNREILMLLELSKTLVYFTT SLKSNEIVMEKLTTLPRLKQYPEDEDLLDDVITENKQAIEMANIYSGVLANMTDAFASIV SNNLNNVMRIFTIISITLSIPTLIFSMYGMNFQEGMLGMPLTDKPWGFAVIIGISLVLSA IVTWFLTRSRMFK >gi|148337405|gb|DS264454.1| GENE 46 28735 - 29571 889 278 aa, chain - ## HITS:1 COG:ML1452 KEGG:ns NR:ns ## COG: ML1452 COG0406 # Protein_GI_number: 15827761 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium leprae # 5 254 6 221 224 87 28.0 3e-17 MIDEVLFLRHGRTAYNLARRLQGQIDIPLDIVGRWQADQSAYELAKTYYWAKVAHLAEHN DQLAQPAYGNAHLADVDEINNAPAAARRMLVVSSDLFRAQQTAHAFADLMGLDVELDPRL RERSFGEWEGMTREEICEHYADDYHSWRAHTGGETKHGVESRIHTGRRGAEAVRDIVAKH HDETMPTTLLLVGHGSWIVATVAVLLDMDPDDLNNVGAMRNAFWTRMTPHTDPRNADRPT WKLEEFNQGPAIASFADWENGPESLRAPGMPLWKPIIQ >gi|148337405|gb|DS264454.1| GENE 47 29860 - 30963 848 367 aa, chain - ## HITS:1 COG:no KEGG:BAD_0868 NR:ns ## KEGG: BAD_0868 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 367 1 358 358 365 95.0 2e-99 MKNFFKGISFSSIFAGALAAVTSFLLSAKIGIAGSVIGVAAGSIVSAVATQVYKNVLKAS GEKLQNAVPFVANDKDGTDGAGKSGDDATTVIAPAESKGEQTKTLSAEESDETTVMTSVD GDTTAAMPATSGRVISSAQAGGRESNILPDNAGSNILPDNAGGSIQHAGRRASFDAWLHG KRAPIVIAIVSALIGVAVSAGLILAFTGGHGTDTVVRDMVNSKQTPSDDNAGDSTYGSGN NGTQDNMQNQSGTTDTDKDSTTNSDRNNGKDTGKKTDSTTGGTGTSTDGSDSSTNTGDDS NKTDSSTDSTTPSDGSTSGTNNSGQSGAGTTTTPNGSTSTNQNPTPNGSNPNGTSSGTSG NGTDTSK >gi|148337405|gb|DS264454.1| GENE 48 31071 - 31802 831 243 aa, chain - ## HITS:1 COG:DR1097 KEGG:ns NR:ns ## COG: DR1097 COG0406 # Protein_GI_number: 15806117 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 20 189 23 184 232 91 41.0 1e-18 MPRNVELDHDETMTPHVRSITLVRHGRTAYNAQHRLQGQIDIPLDEVGMWQVRQTASALR ELYVDRHPEAACQLVVCSDLKRAAATAHAFADPLGLDVHPDVRVRERSFGDWEGIAVEEL AKRFPEDYLSWAQFRGGELKYGAEPKQNVGRRGVEALNDWASKAGSDTDLYVFSHGAWIS QTLQTLLGLSEVHGDFADILSMRNAHWVRLAPLELQGALRWRLVDYNHGPAIADTEQWEH PQL >gi|148337405|gb|DS264454.1| GENE 49 31678 - 31935 64 85 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486279|ref|ZP_02027686.1| ## NR: gi|154486279|ref|ZP_02027686.1| hypothetical protein BIFADO_00084 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00084 [Bifidobacterium adolescentis L2-32] # 42 85 1 44 44 84 100.0 2e-15 MSICPCSLCCALYAVRPWRTSVMERTCGVMVSSWSSSTFLGMPLPYLPVVFPIYCLSAVV FGLLGRRIPKRAFRMIFGKARFDDG >gi|148337405|gb|DS264454.1| GENE 50 31940 - 32362 652 140 aa, chain - ## HITS:1 COG:MT2493 KEGG:ns NR:ns ## COG: MT2493 COG0799 # Protein_GI_number: 15841939 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium tuberculosis CDC1551 # 6 125 1 118 126 100 49.0 1e-21 MGALNMPALQDSIDAIRIAAAAADRMKATDIVAFDVTEPLAITDAMLIASASNERQVLAV AEEIEKDLYLKAGKRQPRSREGLTEGQWVLLDYGDFVIHVMHQESREYYRLERLWKDCPS IDLQLEHAEDEQKPTASSEA >gi|148337405|gb|DS264454.1| GENE 51 32350 - 33732 1878 460 aa, chain - ## HITS:1 COG:MT1046 KEGG:ns NR:ns ## COG: MT1046 COG1207 # Protein_GI_number: 15840446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Mycobacterium tuberculosis CDC1551 # 4 454 25 478 513 389 49.0 1e-108 MALSAAIILAAGEGTRMRSNKPKVLHTLAGKTFLNRVMDSVAALDPDTLAVVVHYQAERV AEAARSYNEHVTIVDQDDIPGTGRAVQCAMAQLTQKDDLDGAVLIAASDMPLLDTDTLDQ LLAFHEKSGNGATVLTTILDDPTGYGRIIRDSEGNVLRIVEQKDANSSELAVREVNTSVY VFDAKLLAEAIANLKSNNAQGEFYLTDALEAAKANGAVGAFAAPDPLSVEGVNDRVQLAA LAKAHNKRVCEHWMREGVTILDPDTTWIEDDVQIARDAVILPGCFLQGHTVIGEAAEVGP YTTLIGATIDAEAHVERSRVQETHIGRAANIGPWTYLRPGNELGEGSKAGAFVEMKKAHI GNGTKVPHLSYVGDADLGEHTNIGGGTITANYDGVHKHHTTIGSNVHVGAGNLFVAPVTV GDGVTTGAGSVVRHDVPSDSMVYSENTQHVVEGWKPEWER >gi|148337405|gb|DS264454.1| GENE 52 33867 - 34406 360 179 aa, chain - ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 5 173 7 157 160 119 37.0 3e-27 MRVEHGFGPVWDAGSRVLVLGSVPSPKSREMRFYYGHPRNRFWPVMAAVFHDDGCLRECR DPDQIVGLRRDFALRHHMALWDVIESCDIDGASDASIRNAVPNDLSPIIMRSKIAHVFTT GAKAAQLYRKLCVPLLRAHGLDGMPMTQLPSTSPANAKADLPGLVEAYGCVARSVSQAS >gi|148337405|gb|DS264454.1| GENE 53 34537 - 35544 1294 335 aa, chain + ## HITS:1 COG:YPO2980 KEGG:ns NR:ns ## COG: YPO2980 COG0667 # Protein_GI_number: 16123161 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Yersinia pestis # 7 333 2 327 329 387 58.0 1e-107 MLEPTTVYTPSPNRYDSMTYNHAGESGLKLPAISLGFWHNFGDTTPYDTMRRIVFTAFDN GITHFDLANNYGPEPGSAEKNCGRLLHEYFHHHRDELIISTKAGYEMWTGPYGDLGSRKY LLASLDQSLKRLNLDYVDIFYHHHMDPSTPLEETMGALATAVNSGKALYVGLSNYDGPTL EKATAILDEMHVPFIINQNRYNIFDRTVERNGLKETAHRLGKGLITFSPLAQGLLTNRYL NGVPADSRIAHDGRFLQQSALTPERLQQIRDLNDLAAERGQTLAEMSLAWLLHDGMVASV LVGASRPQQLIDNIGALRNTSFSDEELRRIDGISL >gi|148337405|gb|DS264454.1| GENE 54 35678 - 36379 1097 233 aa, chain - ## HITS:1 COG:SP0716 KEGG:ns NR:ns ## COG: SP0716 COG0819 # Protein_GI_number: 15900613 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Streptococcus pneumoniae TIGR4 # 15 230 5 220 222 84 27.0 2e-16 MTNHVPEATKPASGDYAWLGAEAGSVADLMYMLNTEDWYDAINSRFVSELLDDTLPESIL KAYLIQDFKFYNNGMMARLIKLAPRQETKDMLAAQSQWFADNEATYFEHFLEAYHVSQEE YDATEPTPANKEYGAYLDSLSDKSWPELITAICCMEWLYLAWAKRTVDADVIQQVPAHKG WVDLHEGAHFRKWVGDLISLVNEYCSIDGPETEVFRTIVHLERRFFDDSYPQE >gi|148337405|gb|DS264454.1| GENE 55 36459 - 37073 856 204 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 12 199 11 199 201 120 41.0 2e-27 MTEENQSSAVRKPNVKWRVVDIVVAAIVAVASGVIFWAWDFIYAVPTALFDSLTPGLGGL FHFMWLFAGPLVAIIIRKPGAAFFGETIAAVIETLLGNPFGVAHALLIGMAQGLGAEIGF AVFAYRKWNLLTVTLAGALTGLSNGLYEWVVTAGWSTLQGVVFTVCCVISGAVFGGALMW FVQKALAKTGVLDRFESGKADVVA >gi|148337405|gb|DS264454.1| GENE 56 37361 - 37921 783 186 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0292 NR:ns ## KEGG: HMPREF0424_0292 # Name: not_defined # Def: isochorismatase family protein (EC:3.-.-.-) # Organism: G.vaginalis # Pathway: not_defined # 1 185 1 185 185 277 74.0 2e-73 MIAEDEWLVVIDRQKVFAESEWSAWACADGTYYDTNEAFEKLAKAFGDRVVYTRYVAPIP PKDAWVDYFKDWPQFLVPPDDPMYDLTDETAALAEGHQVVDRTTFGKWGQQLIDAIGGAK KITVCGVATDCCVLTTVLAAADSGVAVRVPADACAGSTPENQELALNTMRLFEPLITVTD TATILA >gi|148337405|gb|DS264454.1| GENE 57 37955 - 39427 2303 490 aa, chain - ## HITS:1 COG:BS_yxlA KEGG:ns NR:ns ## COG: BS_yxlA COG1457 # Protein_GI_number: 16080922 # Func_class: F Nucleotide transport and metabolism # Function: Purine-cytosine permease and related proteins # Organism: Bacillus subtilis # 8 445 1 425 457 100 25.0 6e-21 MSKDKGALTVEEQGIDTISEEERKGTPASLFWPWFAANISVFAMSYGAWALGFGISFWQA TIMTTIGVVVSFLLVGVISIAGKRGNAPTMVLTRATFGVEGAKVPAALSWIATLGWEISL TTTAVLAMSSTISKLGWGSGAAPKLISTIVVVGLVVVAGIFGYDLIMRCQQVITIVTGVI TVGFFILGWGHIDFDAIGRIPSGGLPAMLGCCFFVMTGFGLGWVNIAADYSRYLPRKSSN SGIVFWTTFGASIANVLLIFYGLLLAGSNAKLAENVGNDPIGAMASILPIWYLIPYTIVA VLGLMSGSIMDNYSNGLALLSFGVKLPRTAAAGLTAALTVAGVVYVTFFSDTFIGPFQGF LTTLGVPMAVWAGMFVTDVIVRKKDYSTPDLYDPNGRYGKWNVKSFVILAVGTILGWGLV VNTAANWLTWQGYLLFLIGGKDGSWASANLGVIVALLVGLFGALAFQRGDIAKQEADLPA SETADAIEAK >gi|148337405|gb|DS264454.1| GENE 58 39554 - 40507 599 317 aa, chain - ## HITS:1 COG:STM2144 KEGG:ns NR:ns ## COG: STM2144 COG0524 # Protein_GI_number: 16765473 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 9 305 22 311 321 148 33.0 1e-35 MGNGTVISLGQVIVDLTMSVEKIPQPGRDVFADEAGIHVGASYNTLHAVRQMGVDARHAG ILGTGPWADTIRRVFESEGIRHVGPTDESVDSGFCVALTDGTAERTFISMRGAEARGDES TFQNVEPADGDVVHISGYTFAHHTGEGLRAFMRRTAPNRRFLALFDPSPVVADIDDETFG EMVEYRPVWSCNEREAVLIAGRLGLPMHQGTFRTLIERMARRLDSALIVRVGKGGAWLAR PGAEAELVAGFPVHAIDTNGAGDCHAGVLCAELSRGTGLREAVGIANAAAAIAVTRRGPA TCPSRIEVEKLLAMQTL >gi|148337405|gb|DS264454.1| GENE 59 40511 - 41539 1213 342 aa, chain - ## HITS:1 COG:mll1744 KEGG:ns NR:ns ## COG: mll1744 COG1397 # Protein_GI_number: 13471694 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ADP-ribosylglycohydrolase # Organism: Mesorhizobium loti # 4 289 3 287 344 152 40.0 9e-37 MAIDEHLTEHARGAMIGLAIGDALGMPTQSMSAERIIECYGGPVRRLMDAVPQQPIAPNM KAGSVTDDTEQAFVLAARLIEDHGRIDNDAYAQDLLRWEAKMKEKGSLDLLGPSTKAALQ ALVEGVDPELTGRFGTTNGGAMRATPVGIAFIPGNALAEEAWRSCVVTHNTMQGIESTTL VAAAVSLAIAGERGFLSKALAFVEAQPPRGNWSAKASVVARVKMFMEWAVREDGSMSDGE FATILRRDCGTSVEANESVAAAFAIATRFFDKPTEALCFAASLGGDTDTIAAITGAMLGA WHGPDGFDPDMRGQVLRQLKDDDRLDLDRTVAGLCALREREA >gi|148337405|gb|DS264454.1| GENE 60 41526 - 42164 637 212 aa, chain - ## HITS:1 COG:mll1745 KEGG:ns NR:ns ## COG: mll1745 COG2188 # Protein_GI_number: 13471695 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 2 200 41 241 243 92 35.0 7e-19 MSETRLAEEYQVSRGTVRRALEQLKKAELIETRMGSGSYVAFNGGDMSGPDGWTSASLRS GAPTTTELLSIALVGRPLALEGESECERFYEIARRRLFRSTPVSYEVSYMPAIPALREVI ERMEGLVDGSILKTMKQAGLQAASGYMDVSADRLGPIAEALEKTPETVFLLSERHNFSDD GTLVEYVRSFLDPSHFALHVTAGENGGNHGDR >gi|148337405|gb|DS264454.1| GENE 61 42543 - 43328 269 261 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 21 256 7 238 242 108 33 7e-22 MKITGLDEERHDRRWNGQRALVTGAGQGIGRAVAQLLASKGVKVAVNDIVPERAENTVKL IADAGGEAFAAIGDIADPTVVEDLFRQLDERFGGIDILVNVAGIIIKDSLDDTDLERWNR ILAVNLTADFLTIKQAVKRMRKQHYGRIVNVSSIAAKHGGGYLGGVAYASTKAGVAALTR GAAREYAPDGINVNAVMPGLTYTPMTAGMPDWKREAIEDSTLVKHGGQPYDIARAIAFLA DPESGYIDGETLDVDGGTSLD >gi|148337405|gb|DS264454.1| GENE 62 43638 - 44243 752 201 aa, chain - ## HITS:1 COG:Cgl2436 KEGG:ns NR:ns ## COG: Cgl2436 COG1335 # Protein_GI_number: 19553686 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Corynebacterium glutamicum # 1 200 1 185 186 152 41.0 4e-37 MGKALIIVDVQPTFCEGGELGVEGGNAVAERIAEYVESHRGEYAYIATTQDWHIEPGTHW SDNPDYVDTWPVHGKAGTANAELHPAIAALKITHHFKKGQYSPSYSGFEGSEDNTDRIPT RTEVDADLAAGKTLANALRAAGVTRVDVVGLAESHCVKETALDAKKLGYETHVIENLTEP VSEELGVEARRQMREAGVVLD >gi|148337405|gb|DS264454.1| GENE 63 44322 - 44540 310 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486295|ref|ZP_02027702.1| ## NR: gi|154486295|ref|ZP_02027702.1| hypothetical protein BIFADO_00100 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00100 [Bifidobacterium adolescentis L2-32] # 1 72 44 115 115 133 100.0 4e-30 MEELARQFIGKECIIYTVTSTDSSIQGTVKDVTDGGIVLEKDGNVEAVNLEYVTRIREYP RNAKGKRKTIVF >gi|148337405|gb|DS264454.1| GENE 64 44804 - 45859 699 351 aa, chain - ## HITS:1 COG:no KEGG:BAD_0884 NR:ns ## KEGG: BAD_0884 # Name: not_defined # Def: putative integral membrane protein # Organism: B.adolescentis # Pathway: not_defined # 24 351 1 328 328 594 96.0 1e-168 MNEKEKDSDTRIYALDGLRGLAALAVVAYHYTGGTLHQLLSGAQFVTLFFILSGLVLSIV PLRVGIDTYNWPRYQLRRIARLAIPTCTAIGICCIVSTIAMHMGWKAEEYANAFSTSSPS AWLHNLLTQLDMLSMTTAGTRVDGSTLAMADLPSWSMCWELLFSLALPVYVIIATDMRFV APIALACVLLSEWTQWPPLRHMAMFALGVALAKRLTDNGRETMRDVVAVPLALCGIVLVC QSGFGLLPGIVVQPLAVCGCLILVVVALTCNVVSDLLSTPPVRWLGRISFSLYLTHLPVR DWIVPYIPVQGMLRPVVLFALCLLAAEAFYLAVERPATRLSRKLGKVKREA >gi|148337405|gb|DS264454.1| GENE 65 46018 - 46449 343 143 aa, chain + ## HITS:1 COG:no KEGG:BAD_0885 NR:ns ## KEGG: BAD_0885 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 143 5 147 147 283 99.0 2e-75 MEIREYDMMTDEARGIRTAAFVVEKDYRPEFDEWDEPGRATHLLAFGNGRAVATCRLYPD LDHADQPGRWVIGRLAVVADERGHGIGKTVLAEAERLIRKAGGHVAAVHSEDKNFAMYEH LGYRITSELFDNGTHGWLVKALN >gi|148337405|gb|DS264454.1| GENE 66 46642 - 46782 193 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSRGLFRPPRHDRSESTYSYWHPLGYGSSESIAYDRNLAVRTAFSS >gi|148337405|gb|DS264454.1| GENE 67 46906 - 47457 298 183 aa, chain - ## HITS:1 COG:no KEGG:Lbys_2559 NR:ns ## KEGG: Lbys_2559 # Name: not_defined # Def: hypothetical protein # Organism: L.byssophila # Pathway: not_defined # 3 167 9 172 187 115 40.0 9e-25 MIALLDANLFVPTWIIDPLLSLAEAGLCEPAWSARVMDEARLAIMEVRHVPDVRARGFLD AICRAFPMAMAEDWERFEPDVNLSDPNDGHVVAAARRAGAETIVTFNLKDFPADELSRYG LHAQSPDVFLTSVFDAHPEEAMDAMRRLVSSKRHPPRTMSEEIEHLRVLRLPLFARRLSE TVG >gi|148337405|gb|DS264454.1| GENE 68 47467 - 47913 431 148 aa, chain - ## HITS:1 COG:no KEGG:ML5_3693 NR:ns ## KEGG: ML5_3693 # Name: not_defined # Def: DNA binding domain protein, excisionase family # Organism: Micromonospora_L5 # Pathway: not_defined # 18 136 27 147 156 61 39.0 1e-08 MTMMMGGKVHRTRSKARRSAGGVPGAFLQGVDGTRIPLTPDDYRRVREFLLAEPERAVAD DERITTGEAARILGVSQRTLTRMLDAGMIPYTRMGERSYRFLRLSDVTDYKRRRDEATSK ALDEMRSIADEDGAYDIDYSDYLSRFDK >gi|148337405|gb|DS264454.1| GENE 69 48416 - 48754 246 112 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486302|ref|ZP_02027709.1| ## NR: gi|154486302|ref|ZP_02027709.1| hypothetical protein BIFADO_00108 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00108 [Bifidobacterium adolescentis L2-32] # 1 112 1 112 112 209 100.0 8e-53 MYDEIPSLLYVAGALITVLSWTLFAFSKTIRPEGRRAFILCLSVIWILFFASSTLALVPY PLFEAYSGFMDPDVLDFYDQPVIRLLPAVTCGVNLCVSAGCSMVLVGKRSKR >gi|148337405|gb|DS264454.1| GENE 70 48768 - 48950 98 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPTEGQSPLVQKKAESVHVETDRNPLVFPFKTTQSLPFALRPADEPHFFCLKRRKPGCQR >gi|148337405|gb|DS264454.1| GENE 71 49356 - 49478 221 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352369|ref|ZP_03743392.1| ## NR: gi|225352369|ref|ZP_03743392.1| hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03986 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 40 74 113 113 72 87.0 1e-11 MKNDTFNQIINANLASIDPGFGQFALAKASSDLMKKVLNK >gi|148337405|gb|DS264454.1| GENE 72 49468 - 49662 82 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPHRPEAEGAVRPENSMAVGFPDAGVGPGGNPDWNPHTKNGLPWSVGNHGSPPCDSLESE SLTC >gi|148337405|gb|DS264454.1| GENE 73 50082 - 50252 86 56 aa, chain + ## HITS:1 COG:no KEGG:Blon_0040 NR:ns ## KEGG: Blon_0040 # Name: not_defined # Def: transposase, mutator type # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 2 49 75 122 414 77 87.0 1e-13 MYRAGHYDRSLTAKAGRLGLKVPKLKGEVFESAVIERHRRREESVDPPLSRQVPAR >gi|148337405|gb|DS264454.1| GENE 74 50359 - 51726 989 455 aa, chain + ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 4 451 2 454 459 214 30.0 2e-55 MTFISRAARYVLRKRVRTAVLFIVLTIITASMLSATAVSQAAQHEARQIEKQAVSGFVLA SNLQGSMLTPRGGGMVRPADVQRISKLSGVGSCMVRQNATADLVGASVVKVPGGDDYDAE KEQQFGNTANVIGTNDSSKLNVFTSHTLGMVEGRHLKASDKHMSMVHEDLAKTNGLKVGD TLTLKANPYDADNESHSTATVKTTIVGIFKGDSDRKVSSRAELTSNTVYTDLDTTSTLYQ YKVGKEIYQDATFVLDRGVDVEKTMEAAKKLPVDWNNYQITRNDQYTSSMLNAARSVRSM MRGALIGVTISAVIVLSLMLLLWMNDRRQEMGVLVSLGIGKPSLIAQYLTEMILIGLPSL VLGWLCARGAAQWLGTSALRSVNASAAKELSSMGQVGGDLESNMSVRTLDSLTVSIDTTA VLYVSLGLLAVMLVCVAISCIPMLRKSPRSLSELR >gi|148337405|gb|DS264454.1| GENE 75 51723 - 52946 831 407 aa, chain + ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 55 406 14 386 387 129 29.0 7e-30 MTGMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGASTALQKMSDDIGGSLGIGF TVDTGENPVSPKEASRFSRIPGVGKTVYERKTLAQVDGAHPVVPEHGPRLDSGLSTQVSV LGTTDSSLSEEFQSGLYRLEQGHHISGNGRNVLIHRDFARENGLSVGSTFRLSQEGRDST VRVAGIFSGNVQAQSPMPSDASENLIYSGAQVVSALTGEERVGTIRCLSDNPRDLSAAMA QAKKIAGSEYGVTDDSAQLSGVLQSVETVRDLVRMVLLSVCLADVLVLGMALVFWIRSRI HEIGTLLALGIGKMQIIAQFAIETGLMAVVAALCSLGTGSLLSGYVSSLLLHDSGVAPLE SLQVEALPPEQTLLILLLGCAVIAIALAVSCAAVLAKSPKSILSSMR >gi|148337405|gb|DS264454.1| GENE 76 52959 - 53594 199 211 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 196 1 201 305 81 29 1e-13 MTICLQLDHVNYSYGAAKIRVLSDVNADFESGKMYAITGPSGAGKSTLLSLLAGLDAPSD GVVRFEGEDIATTGYSKHRREHVSLVFQDHNLIDYLTPEENLRLVNPKADMKILEDLGLS REESKRNIMHLSGGQRQRVAVGRALVAPGRAILADEPTGSLDPEMTDEVIDLLRHAAHQL GKCVIVVTHSKRVADSADAVYTLRHKKLAKA >gi|148337405|gb|DS264454.1| GENE 77 53827 - 54123 160 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486312|ref|ZP_02027719.1| ## NR: gi|154486312|ref|ZP_02027719.1| hypothetical protein BIFADO_00118 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00118 [Bifidobacterium adolescentis L2-32] # 1 98 29 126 126 178 100.0 1e-43 MPRKETNPPHRKGTKNDRTTHRRHGQDGRFHDSDVASDEVTGAIIAIEGPKSLQLSDATA IVGGVQKRLTDKVEIIWGLNFTDEDVLHATILLATPRK >gi|148337405|gb|DS264454.1| GENE 78 54639 - 54866 167 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDGNPQHVKRRRATLPHPLECSTIAAPGLSYRVRNGTGRLTRAMTTAKPRSRNDSQNMA AIPAIQLSCGGLGTG >gi|148337405|gb|DS264454.1| GENE 79 58306 - 58500 86 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486318|ref|ZP_02027725.1| ## NR: gi|154486318|ref|ZP_02027725.1| hypothetical protein BIFADO_00125 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01772 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01772 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00125 [Bifidobacterium adolescentis L2-32] # 1 64 27 90 90 119 100.0 6e-26 MFFGQCVPHDGVTVMPYSVDAGVEEIMGLDVPSGCPGVVWVCFWAPGPPPHRFVSVARFD AHME >gi|148337405|gb|DS264454.1| GENE 80 60312 - 60506 126 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486320|ref|ZP_02027727.1| ## NR: gi|154486320|ref|ZP_02027727.1| hypothetical protein BIFADO_00128 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00128 [Bifidobacterium adolescentis L2-32] # 1 64 42 105 105 116 100.0 6e-25 MLMVDMPTAIGFAFTWLWFSGSILMVSALSGRIFPVFDTPMERWISNGSVLHCALRVARL RVLV >gi|148337405|gb|DS264454.1| GENE 81 60709 - 63684 4520 991 aa, chain - ## HITS:1 COG:TM0025 KEGG:ns NR:ns ## COG: TM0025 COG1472 # Protein_GI_number: 15642800 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 653 891 5 261 721 175 39.0 3e-43 MLQINMADVMNVIGSLTPYLIAIGVLFALALIITFAVNKKTVKEVATRKIVHSESWLVAL VGIVVAVSMMLTGPLSTLLNNATTTKYMLSDTTVSKANELAKEVQSEAITMLKNDDSNLP LSNKKVNVFGWGSTNPVYGGTGSGSMSDQYETVSMLDGMKQAGIETNSELTKLYTDYRKD RPVVAMWSQDWTLPEVPAKQYSDKLISDAKDFSDEAVITITRVGGEGADLPTNMKAKGIT YNNNSKDYEDFKDGEHFLQLSQTERDMIDLVTKNFKKVTLVYNGANAFQFDFLSQYPQIK SVLWCPPAGQTGFSALGEVLAGDVNPSGKTSDTFVKDLTKTAVFNNTDGTAAGNASSVGT NGKFTYDNADDLAASYMGFSGDKVTVTPTFVNYVEGIYVGYKFYETAADEGLINYDDTVM FPFGYGLSYTTFKQEMGKVSYKNGKISFDVTVTNTGDKAGKDVVEVYYNPPYTDGGIEKA SKNLVAFEKTKKLEPGASQTVKIEFDDDDMASYDQKDAKAYVLEQGDYDISIQSDSHHVI DHQKVTVKDTVTYNSDSNTHNGDAVAATNEFDYAAGDVTYLSRAGHFANYAKATAAPTNF SMSDEAKAEFTNNSNYDPKKYDNDSDEMPTTGAKNGLKLYQMYGKDYDDADWDKLLDQLT FDDMDNLIANGGYGTPAVKSVGKIQLTDADGPASLNNNFTGVGSIGFPASTAFACTWNRD LAKQFGEMIGDMAHDMHVAGWYAPAMNIHRSAFSGRTFEYFSEDSLLSGAMASNEIAGAK SKGVYSFMKHFALNDQETNRTNMVCTWANEQSIRETYLKPFEMSVKEGGAQAVMSSFNYI GYTYAGASSNLLQTVLRDEWGFKGFVLTDYFGGYGYQNADQEVRAGNDSMLATTKITNHI TDKSATSVKAMRQAAHNILYTAANSWQYANGEPKVATPIWKTAMYVAWGVTAVLVIGLEI VAIKRYLNRKKAVATVESAAEPVAAGPANAE >gi|148337405|gb|DS264454.1| GENE 82 63936 - 65963 1744 675 aa, chain + ## HITS:1 COG:L138452_1 KEGG:ns NR:ns ## COG: L138452_1 COG0515 # Protein_GI_number: 15673869 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Lactococcus lactis # 18 224 12 212 431 116 31.0 2e-25 MSDLSALNLEAGSLVGGYTLISRLGSGAMGSVWRVRDDGGHQYAMKILRDSLSDDDSPQQ QRDELTARERLRREAMALQKVRHPGVCGIVDMELDDALAFIVTELIEGKNLREDVRVNGR YVGDDLERLARKLIEAVRAVHAAGIVHRDIKPTNVMVSSTGPVLVDFGIAMGEGESHVTR TGLVMGTPGFIAPEIIDGAESDEMTDWWSVASVLAFAATGEPVFGTKPMMTVLERAAAGS ANLAGLPAGTMAAFRSALNPDRTKRCTPDDLLQAIAVDALNPQAWVAADNGGAADGDTEA MPPFVESPDNPRTLWQSQDDITGENAIGTRTMPRLSEATQAIGQPDVSATQVIGKQVTSQ SDASATQVIAPVDDAETSVLSDALPNVGSTRAMPTGTQVMPQSMPSTQMLPAQNAWNPAE APTQVDPTIKPALQRIAMRQPPSVIPQATVAAAQQSPAMSFPPVPGMDGPNVAEAPNPAD VKRGAMLGRGMLPCALMAIPVAVCGLFSLWTAMAAALLFACALATIGFNTEAQLEREGKR GGEKKSSDWLLRLAGLPWHIVKGFGVAIVRTLIMLAVAALGLSLTTVVLQLPYAVMDTWI FGLTIPMPTLLGGPLSESGLAQAAFCAIGWLVAVAAPGAIVLRLGGGALRKQPYLRHLSE LPTQSQGNTEFPANR >gi|148337405|gb|DS264454.1| GENE 83 66020 - 67003 1429 327 aa, chain + ## HITS:1 COG:ML1667 KEGG:ns NR:ns ## COG: ML1667 COG1651 # Protein_GI_number: 15827883 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Mycobacterium leprae # 118 279 90 234 264 62 29.0 1e-09 MAQNSKDAQKRTSRAERRAAEAAAMKARAEQMEKERKQQTIIGGIVVAVLVILVAIGAFT VYHNMHKKAETKASTETVQEAYTALQKVKNTPKLVDKKGGLLISKNGYGKAVEGAPTVEL YMDFLCPGCGNLHRQLDADLQKMVDAGQINLDLHFMAFMDRWSTDEYSSRAANAAIYLAE HDSDPNHLISFLEKVYAEDFQPEEGSAYKSVSDAKIKEQMIAAGVSKDVADKAFGRDYQE WLDAIDTYTPKRSELWHQSGSYKGSMTTPTVIINGKYWDMDQLTTAQTTVKDGLLESIGL KDSEVGVAGKMPSIGAKKGPISVTTGE >gi|148337405|gb|DS264454.1| GENE 84 67199 - 67438 225 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTGLGLLPWVSAPEVFPQLETSGKADETSPNLSRPTGGRTSPSLLPPFYFSLFAPAFKNV AVWIKPSESTATVPAEPLQ >gi|148337405|gb|DS264454.1| GENE 85 67471 - 69006 2048 511 aa, chain + ## HITS:1 COG:BH0055_1 KEGG:ns NR:ns ## COG: BH0055_1 COG3583 # Protein_GI_number: 15612618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 18 289 5 279 320 104 30.0 4e-22 MTRRWTPRRFVTLRRVRVMACVASLTLTSALAFGVGARKSVALTVNGETTTVTTYAMSVD RLLQEQGVKVKTHDLVESTSPTSMLKNHDVVNVQSAYQTTITIDGQEVPFWTVASSAEQL LDFFNQNETEAAKITVNISNVYNKLTGGLIINQKGPVTVIADGKSSVAPNGKLPAASILD AKGITLGKEDRVSVEKDGKTTILRVRRVTHGEETRTKEVPFGTQTIIDPNLQPGEVTVRQ EGENGEIQQTYAVTYVDGVKESETLTEEKTTKIAIDKVIAVGPEKTTDDTDKSDKSDNSG NGNGNGDNGDSGKTDDGKNDSGKNDSNKNDNKSDSNKSDSDKTDSNKSDSSDKNNSNNNS NNNSNNTKKDDPAPTPTPTPAPQPTPAPQPKPQPTPQPSNPSAGCRLYHPSAAQAQAYAS GAAAQRGWTGQNWTDLVKLWNRESGWSWSAENVYSGAYGIPQALPGSKMATFGANWKDDA AVQIDWGLSYIAQRYGSPSAAWQHSEQTGWY >gi|148337405|gb|DS264454.1| GENE 86 69058 - 69984 1362 308 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 10 304 1 289 293 248 49.0 1e-65 MTEEGMTENVNEHTQGHLLGAADIRRIAADAGISPTKKFGQNFVIDPGTVRRIVREAGVT ADDHVLEVGPGLGSLTLAILETGATMTAVEIDPPVAERLPKTIAEFMPDAVDRFRVVNRD ALTVNPENLPDFKDDDSFTLVANLPYNVATPILLTLLERFDNLGTFLVMVQKEVADRLSE KPGSKIYGTPSVKLAWYGTTERVGVIGRNVFWPAPNVDSALVLFKRYPGGHTPAADNADG SVVDRETVFRLIDAAFGQRRKTLHAALKKIVPSEAFEKAGIDPTRRGETLTIDEFVALAR ALDEVFAS >gi|148337405|gb|DS264454.1| GENE 87 69981 - 70907 976 308 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 16 266 5 260 306 127 38.0 4e-29 MSTIDSPAIGTATINAVSVDCPAKTNLTLHVGPSHAEWGGRHELDTIYCAVGVYDTVTTT RKAPGSGFSLNLEGAYLGDLASSGSDMRRNHAVLALFAMAEASGHEPDVALNIDKRIPVG AGMAGGSADAAATILALNTLWDLDWPIERLQEVAATLGADMPFCLTGGYARGTGFGERIE QLDDDGDIVRDLTERGFTGHLLVGAYRAELRTPEVYATFDQIGAGDGDENHLQKAAVSLH PRSGQAIEEALRAGASQAFVSGSGPSVIAFVPTEDAADAVQRAWQDSRCVDRIIATNAPA RPIVHITA >gi|148337405|gb|DS264454.1| GENE 88 70969 - 71601 927 210 aa, chain + ## HITS:1 COG:no KEGG:BAD_1617 NR:ns ## KEGG: BAD_1617 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 210 1 210 210 376 99.0 1e-103 MTQANDERAARKEYIRRRQKTVFSIVGAVMVVAMVVSLLFFFHVGGLGNVKSAAIQPNYG QQAPCPIKEADGNKAKYVENRNITLRVLNGTKFSGFAKAVSDALQNREFNPQTPDNYTKK VDRTMIVFGKNGVNQAYTVASNFTDAMLVMDDRQDQLIDVIVGATFDNLQDTKKVPAAGK AITGIQGCVAVDKMTDLPKAPEHDAVNPQS >gi|148337405|gb|DS264454.1| GENE 89 71732 - 73108 1649 458 aa, chain - ## HITS:1 COG:MT4026 KEGG:ns NR:ns ## COG: MT4026 COG0617 # Protein_GI_number: 15843539 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 457 31 478 480 456 53.0 1e-128 MFAAEGYELALVGGPVRDLLLHRKSHDLDFCTSARPEQFEHILRRFGHDGFWDMGRKFGT LGAMRRREDGTEVKVEVTTYRSDTYDPDSRKPEVNYGDTLEGDLSRRDFTVNAMALRVPE LEFVDPFGGANDLAKGVLRTPVDPRQSFDDDPLRMMRAVRFVAQLGFRIEPETAEALSDM VDRIEIVSAERVRDELVKLLLSDRPRAGIEALVDSGLADIVLPEIPALQLEIDEHHRHKD VFEHTMIVIERAVALETGPDGPVPAPDLTLRLAALLHDIGKPKTRRFEAGGKVSFHRHDA VGAKMTRKRLKALHFDHHMVEDVSELVNLHLRFHGYVEEPWTDSAVRRYVKDAGPLYERL NRLTRADTTTQNKRKAMMFSAAMDEMEQRVRDLKEKEDFDAIRPDLNGDEIMQLLSIEPG PMVGKAYKHMLEYRLDNGPVERDVAVAELERWYKEQGE >gi|148337405|gb|DS264454.1| GENE 90 73235 - 73912 618 225 aa, chain + ## HITS:1 COG:MT4027 KEGG:ns NR:ns ## COG: MT4027 COG0494 # Protein_GI_number: 15843541 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 85 214 62 194 248 119 50.0 6e-27 MITPADLARMLAHAADDHAQNPLEPDELLYTSQSVSLQQLQQLQQLQQRTIITPSAPTPA MMPRRRTADGPTTFASLDAQELPVVREYSAGGLVFDDKGRVAIIARHSRSGHLEWCLPKG HIEKGETPQQTAVREVHEETGILGEVVDSIATIDYWFTGTSQRVHKLVHHFALRQIGGEL TVEGDPDHEAEDAIWVDFADLDDVLSYPNERKIAWLYARKLNRQA >gi|148337405|gb|DS264454.1| GENE 91 73920 - 74189 149 89 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486332|ref|ZP_02027739.1| ## NR: gi|154486332|ref|ZP_02027739.1| hypothetical protein BIFADO_00141 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00141 [Bifidobacterium adolescentis L2-32] # 37 89 1 53 53 88 100.0 2e-16 MASVSVPAGISCPVVLVTVAFRWYPEVSVNTAVEELMDNIPSVDSADVVDSMALADGVGA YNNINAMVNTMARMDDNARRPRETCRCAD >gi|148337405|gb|DS264454.1| GENE 92 74071 - 76035 2072 654 aa, chain + ## HITS:1 COG:no KEGG:BAD_1620 NR:ns ## KEGG: BAD_1620 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 654 66 719 719 1145 99.0 0 MLSINSSTAVLTDTSGYHLNATVTNTTGQEIPAGTLTLAMNAFYTFVSRNDIQDWSEGNG RIPTPQSVGQADVPALQPGASANVSIDADAHQESLAAINSWGPKPVLLSYSANGTPLAQS HTFVTRTGAGLHTPSTPALHITVAQPLAANGWTTDSKLLGQLVDEGGISSSKLAKIAMPS KDDDARLKSLQQTFAKHDMLQVVGDPTYLQAMAMPTRVDGITQPALFDITAYSAMNNAPA YSAAGINDRQWSAAKARKTYQSALGDSNADITAYAWQGNGNWTLQALTKARQQGYGTVIA THDFEEDDAATVRTGKTVVSTDVGDITVLSAQNVLSGLAQGKATSDDANADSEGTTAGRL ARFVAQSAFYQMEQPYAERNLLVCLNEDSDPSVVDALMSDIEQSPWLNLTDLATLKDADI SEDAASMSTDLPQTDGLTDGMRSDVQQTLSALANSSSNIKRFNTSILVKPNGKDESDVNT WSRQLTNAHTIMALHALGGESPSRSTMAEGANQLAALLINGVAITPTESVNVVSETAKMP VTISNSHPYPVKVKVSSLTDSMQIVTSRFDTVQVPPHGEAQVAFTIRVSTSGTANATISL FDRNGAAFGATQVTHITSALQISDKSGFVIIGFAVLLGAVGLWRQFNRKKDPDE >gi|148337405|gb|DS264454.1| GENE 93 76032 - 77771 2054 579 aa, chain + ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 3 457 78 522 640 146 28.0 1e-34 MSSSVGRNSLIMASGTAASRVTGQIRTILLAWALGTTGYAANAYQAGSMIPQVIYTLVSG GIFNAVLVPQIVRTLKSKDAETKLNKLITLAITLLLGVTLLMAVATPLLTKLYVNGSAET MALATSFTLWCMPQIFFYGLYTVIGQILAAKDHFVTYAWSSVGANIISCIGFGAFIAMFG RATERPLDFWTPTKIALTAGTWTLGVAFQALVLFIPLTRIGLKYRPKFGVHGIGLRSMGP VAAWSLGIVGVDQIVNIIVTRVATSAPFKASEQLHMSQLDVAGNASYQNAYTIYMLPYSL IAVSIATAIFPKISKAIADRNIDEARKDLSSALRNLNLIMCFFAAAFIVLPLPIILALLP SISVREALLISAPLAALGIGLPLSSSYLVIQRTFYAFEDGKHPFIFMAITMAIQGGVIIA STFILPPTQWITVIGLAISVSFILPYPLLTHMLRSRFDGDVDDKRIITAYAKALVATIAA CVIGLLCRNGVYRLVGAHIGPDDGTMNWGQAVLSAILLTIVIAIVYLACLWALRAEELTS VVGMLAARIPGLGNKPKSGGTASPNGKLEQSTAENGDQE >gi|148337405|gb|DS264454.1| GENE 94 77812 - 79839 1909 675 aa, chain + ## HITS:1 COG:no KEGG:BAD_1622 NR:ns ## KEGG: BAD_1622 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 675 1 675 675 1204 99.0 0 MKPQLGDTISNRYVLVSPLREETGLQVWKASDHVLARDCQLFIVNNRKALQDVNATASML AISHDAHFTQVLQLQHVGEVALVITQLDAGMSLSEYLTQSSKPLSFTAIRSILGEVVEAL HVLQKDNLTHFSISTDTVRLTRNGIEIADAPVSIMLADTSRVQSVENQEQLAIRQVASLL YSLLTRTPSTLSTNYHLDAISPNVPMEFRVICKRGLDLKEKDGFPTVPMATIAELEALLG DYEPLAKLNGPDIALPSADSECSIVNVPLLQILEQDAIALPDTLAETGSIPEMTFEAPEP HTDFSDSKEALAKGMAATGGAVKSLWNNSRELLSEEDLDGSSEDVDSPFSFPIRVSTPSP QGDYHTDDSQLEKTGRIPVIGPDGRVIEPGEESARALKAEQEAIDAAYQNENGAPVAVPP SFAPKASSSSPAEVANAKLFGKLTTKVVAIVVAFIVVAVALGFAIHGLTKKPDDGITNTN SNNPWPEMNLDDVPFGNNGDSGNGSSSASDANSDSNDADSSDNGSSDSSKPKKTTKKNHS AKKDVDKVVTSDKKVRKVPEPKMPENTTPYEIDNRQFLSNPDGQQGYGYYLHLSQPQKAY RMVIKIRSSGGQGYIRVNAKSSPNQGEQVAQFEFDASGTTEIKFNKAVETQDILLWVPFD SLPGNQLYIDSVQIF >gi|148337405|gb|DS264454.1| GENE 95 80000 - 80941 752 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 4 312 1 306 306 294 49 7e-78 MSDMRDVVIIGSGPAGYTAAIYLGRAGFEPLVVAGALTPGGQLVNTTEVENFPGFPDGIM GPDLMDNMRKQAERFGTHIVWDDVVSVASNADSGITTVTLDGGDVYDARALVIATGSNYR KLGVPGETEYAGKGVSYCATCDGFFFRNKPIVVVGGGDSAFEEADFLSRFGSSVTLIHRR STFRASRIMVERAQRNPKIDFMLDAVVQEIRGDENGVQEVEVRNTATEKTSAIPANGVFM AIGHTPATAFLNGLVDVDSAGYITVDGASTRTSEPGVFAAGDCVDSVYRQAISAAGMGCR AALDAQAYLDSLK >gi|148337405|gb|DS264454.1| GENE 96 80996 - 82282 1311 428 aa, chain - ## HITS:1 COG:ML2706 KEGG:ns NR:ns ## COG: ML2706 COG1475 # Protein_GI_number: 15828464 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium leprae # 138 423 59 330 335 226 46.0 5e-59 MATKSRLGKGLGALFPSLPGEPQHQEHAAPAAAAKEVKASKTDEHVESKSASATAQASVN AVQGMKHAVSRETTKKNQHRRASMPSISLNESAHPADMFFGSTAQPASEQGEQQGSVSRE TTPTEHKKDEPELLPVQGGYLVELRLSDVGPNLHQPRTIFDEDDLRELAESIKEVGVLQP IVVRKRPQSQIEAARREAAAKPAEPHNMFDGRMDSMYELIMGERRWRASQIAGLKTIPAI VKTTADDDMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLTQAQLSKSVSKSRPQIANT LRLLNLPAAVQKKVASGLLSAGHARALLGLPTEADMEQLATRIIAEGLSVRSTEEIVSMK AAESDQPKKPKASKLNPWAGTPVQVGLEQRFGTKVSIKGSKKHGRIEIVFKSEDDMKRIV DLLMQQQS >gi|148337405|gb|DS264454.1| GENE 97 82285 - 83265 1174 326 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 51 313 30 291 307 269 53.0 4e-72 MTGPEEPDNLTSMESATETIKRIFEGSTSPVGAQIADESTRYKALEHAVCPKPAQTRLIA VANQKGGVGKTTSAVNLSAALARFGCKVLLIDMDPQGNASTALGAPHASGQPSVYDVIEG RKRIAEVKCTCPDFDNLDVVPASIDLSGAELEVADMADRNSLLKNAVDEFLATSEEHYDY VIIDCPPSLGLLVINAMCAVHEMLIPIQAEYYALEGLGQLINTIGLVQEHYNPSLLVSTM LITMYDKRTLLSREVHGEVKKHYPTIVLDTTIPRTVKISEAPSFNQSVIAYDPKGMGAIA YCEAALELSRRSDTVLQAIDARRNEN >gi|148337405|gb|DS264454.1| GENE 98 83508 - 84242 602 244 aa, chain - ## HITS:1 COG:Cgl3036 KEGG:ns NR:ns ## COG: Cgl3036 COG0357 # Protein_GI_number: 19554286 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division # Organism: Corynebacterium glutamicum # 12 243 5 207 209 140 40.0 2e-33 MSDVNDELDGSPILEEVLGDALGKLKVFHVKLAAEGEPRGLIGPRDVGIIWERHILNSAA IVPFIREATAKRQFKTVADIGSGGGFPGIVAAACLPDHQFTLVEPMERRIEWLHECVDEM GLDNVSIVRSRANAVIEAVRGSNGGRKGRGEDAVDLDGNPIPVRHPFAVVTCRAVAPMTK LSGWTLPLLDKGGRLVALKGRSAQEEIVKATKEISKNGGIHPRVVEAEVGPGLEPTHVLM VDKR >gi|148337405|gb|DS264454.1| GENE 99 84321 - 84848 671 175 aa, chain - ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 2 159 28 184 187 98 47.0 5e-21 MAQDAEKTIDQLNDEADIAADYLEGLLDIVDYEGDIEMGVRNNRPTVQIVADDDTDIKHL IGRNGEVVDALQQLTRLAVQQKTGERSHLIVDVDGYLKRKRQRLHDLALDAIDEARETGE PVDLKPMNSFERKIIHDVVREEGMKSRSHGEEPHRYVTVYVKASAVDDADEIDEA >gi|148337405|gb|DS264454.1| GENE 100 84993 - 86027 1453 344 aa, chain - ## HITS:1 COG:MT4040 KEGG:ns NR:ns ## COG: MT4040 COG0706 # Protein_GI_number: 15843555 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Mycobacterium tuberculosis CDC1551 # 19 268 13 264 366 115 29.0 1e-25 MNQDQFLLDSGFWGWLYKLLYPVEWLMTQIMAGFHRFMVMLGMNEIGFSWVMSIVFLVIV VQACVFPLFYKSMKGMRKMQAQMAVLQPKMQRIQNKYKGKNDPASKEALQREMMKLYQDN DANPMGGCTSMLPMFVQGPVFMCMFYTLSAIPYIARGKFRNGSGLGAFDIATAKQFTSTN VFGVNVAENFTTADIHGKIIIGIFVALMCFCLWLMQYNSMKRNMAQSAANKQTEMMQKMM LWMFPIMYIFSGVAMPFAVLVYWLTNNICNLLRSVWQIHVFPTPGSPAAEAKEKRDHAHE NARRAKAGLPSLEEEELQKAKKAAEAKEKNGFQRQQPSRKKKKK >gi|148337405|gb|DS264454.1| GENE 101 86027 - 86359 82 110 aa, chain - ## HITS:1 COG:TM1462 KEGG:ns NR:ns ## COG: TM1462 COG0759 # Protein_GI_number: 15644211 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 7 86 2 81 81 84 48.0 6e-17 MSKGHHRNWMVRLIRWYQKHISAHTAPRCRYYPSCSNYAIQAIERFGCLKGGLLALLRLL RCNQWNRGGIDDVPQLYSLFYRCSWSKAHEEPRLTPLDVDEPIGDKENGL >gi|148337405|gb|DS264454.1| GENE 102 86356 - 86721 231 121 aa, chain - ## HITS:1 COG:no KEGG:BAD_1630 NR:ns ## KEGG: BAD_1630 # Name: rnpA # Def: ribonuclease P protein component # Organism: B.adolescentis # Pathway: not_defined # 1 121 1 121 121 189 100.0 2e-47 MERLKSHRDFVAVLKRRRRVSREDIVVHYLMHDDVVTGDTATVQGRRVGLAVSKAVGNAV TRNAVKRRFRVLARKYESLLPESCDIVLRAKPSAARADFLSLEQQMASCFEAVKRKTASR Q >gi|148337405|gb|DS264454.1| GENE 103 86742 - 86924 308 60 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026649|ref|YP_910494.1| 50S ribosomal protein L34 [Bifidobacterium adolescentis ATCC 15703] # 1 60 1 60 60 123 100 2e-26 MRSRALAWLKTPGALIMKRTFQPNNRRRHMKHGFRQRMRTRAGRALINRRRAKGRKSLAA >gi|148337405|gb|DS264454.1| GENE 104 87155 - 88693 2052 512 aa, chain + ## HITS:1 COG:MT0001 KEGG:ns NR:ns ## COG: MT0001 COG0593 # Protein_GI_number: 15839373 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium tuberculosis CDC1551 # 19 509 2 505 507 352 43.0 1e-96 MHISGTSVEKGLSVADNTTTDPLEQARGVWSDALALLHQNPSLSVRDKSWLENVYPEGMW GPTIMLCVPSEAAQQALQTELNKPLMEALRESAEQDIFPAFKIVEMKPKTEEQPEETYPR FSPAKSPAKSPANETMQGQLPIPATMPPEQDHFQSGQNRPLLDPETHLNKNATFDTFVPG DSNRFARTVALAVAEGSGHDFNPLCIYGGSGLGKTHLLNAIGNYALVKDPNLKVRYVTSE EFTNEFIEALADTNQSSGQIKEFNRRYREVDVLLIDDIQFLSGKDATLEQFFHTFNTLHQ ANKRIVIASDVPPKDLQGFNERLISRFESGLTVDVKPPDLETRIAILRMIATMNGSNIPN DVFNLIAERFTENIRELEGALNRVTAMASLSNQPVTKALAEQTLQDFFTTDVEIKPADII TQVAKYFYLTFDDIVGRSRTKKIALARQIAMYLVRELTSMSLNDIGLVFGGKDHTTVMHA YTRINDEMQEKQEIYNYVTELTLQLKQRSNDK >gi|148337405|gb|DS264454.1| GENE 105 89189 - 90313 1599 374 aa, chain + ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 8 372 20 400 402 239 36.0 8e-63 MKVEVNSQALADAVAWTTRVIDARPATPILAGIRLEAIDGTLQLSAFNYAISARHHIEAG VDEAGSVLVLGKLLADITKSLPAAKTYLSTDGSTMTITSGKSTFTMQLMPESEYPDLPVV PTKLGQVDSPTFAQAVNQASVAVSREENRPVLTGIRVQFQGDKVIMSSTDRFRLARSSFT WTPEDATISTTALIRGSLLRDMARSLDEHQNVTIDFDADNPSLLGFENAGRVSTSQLIDG EFPAVDRLYADEYPIHAVINKQALIDAIKRVSLVAERNAPIRMVFSGQELTLSAGTADEA QAKEILDIDMDGEDITVAFNPSYLVDGLSAISEPFVRMKMTTAVKPVEFNGQQEADSDES MDYRYLLVPMRFNN >gi|148337405|gb|DS264454.1| GENE 106 90392 - 91603 1092 403 aa, chain + ## HITS:1 COG:Cgl0003 KEGG:ns NR:ns ## COG: Cgl0003 COG1195 # Protein_GI_number: 19551253 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Corynebacterium glutamicum # 1 365 1 371 394 219 38.0 7e-57 MHISRLALDHYRSWDHCVLDFEPGINILQGSNGLGKTNIVEAVEVLSTGSSHRTSSSLPL VEKGHPSATVRANIEDAGEQRTYEITIAARGANRARVDGGKSQYMRDIVGLVPSVSFTPE DQRLVSGDPATRRNFLNQAASLLLPRYAQSLQQFTHVAKQRAALLKQLSDGSGIDPEYGR QAVLSGLEVWTGQFIALGVQLTKDRNDVIGLLREPFTRIYASLAGEEEQADLVYEPSFDE VLLFDEPAAEISRHFQRIYPGEVARGQNLIGPQRDDLTLRLNDMPAREFASNGEMWTMAL ALKMALYEVVSAQRDVKPIVILDDVFAQLDESRRGQILDFARRQDQVLITVAAASDIPQG EAHVIDVAALRAQSQETDGDIAAMAAMLAAGRGAQSQGIEAES >gi|148337405|gb|DS264454.1| GENE 107 91603 - 92088 461 161 aa, chain + ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 40 153 62 175 189 63 28.0 1e-10 MPKPPICELLNLDQRKLPAEVFDRISDRAGRLKEREERARKAWESFGKPGRDPETVGSLF NLLASNGAWIPHLKMAQMRDHWDQVVGVENAKHSYPASLRDGVLTIRCDSPAWTTTLSYM TPLLTDTIRRKLEGLTINEVRVTGPQSQGFSRGRISRKIRY >gi|148337405|gb|DS264454.1| GENE 108 92399 - 94507 3138 702 aa, chain + ## HITS:1 COG:Cgl0005 KEGG:ns NR:ns ## COG: Cgl0005 COG0187 # Protein_GI_number: 19551255 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Corynebacterium glutamicum # 40 701 4 683 684 743 56.0 0 MADLDADSLNESAENTQEDQIQDQIQNDQLEDAQLDDSLSPEHYDASDLRVLEGLEAVRI RPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYASHIEVTILPDGGVRVVDDGRGIPVDE VPGEGISGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVNALSTRVDIEVRRQGFHWT QTYIDQKPTARLLKGKPMEEGESTGTSVTFWADGKIFETTTYDFEILRNRFQQMAFLNKG LKISLTDLREPDQAGDEVSGEESETEDKFQTVTYQYNDGIKDYVDYLVKSRKATPVEPDV IDFEAEDLKIGISAEIAMQWTTAYSEAVHTFANTISTTEGGTHEEGFRAALTSLVNRYAR EKNILKDKDENLSGDDVREGLTAVVSVKLTNPQFEGQTKTKLGNSEAKTFVQRVMTDKLG DWFDAHPNEAKNIIQKAIEASRARLAAKKARENTRRKSIFESAGMPDKLKDCQSNNPEEC ELFIVEGDSAGGSAIQGRNPITQAILPLRGKILNTERASLDRMMKSDTIESLITAVGGGY GEDFDLNKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPMITAGYVYVAMPPLYRLKW TKGPHDFVYTDAERDRVLAEGKAAGRQLPKGEGIQRYKGLGEMSYQELWETTMDPDHRIL KQVQIEDAAAADETFSMLMGDEVEPRRLFIQRNARNVSWIDA >gi|148337405|gb|DS264454.1| GENE 109 94549 - 97263 3526 904 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 38 891 10 856 856 991 59.0 0 MADENNSNEDGQFVPDGSMEPLSPQEADNTDYGLMVGERVQKKDLQQEMRESYLAYAMSV IVDRALPDVRDGMKPVHRRVIYAMYDGGYRPDRGYSKCARVVGEVMGKYHPHGDSAIYDT LVRMAQSWSMRYTLVDGQGNFGSPGDDPAAAMRYTECRMAPLAMEMVRDIDKDTVDFLPN YDGKTQEPTVLPARFPNLLCNGSSGIAVGMATNIPPHNMREVAEGVHWALDHPDASREEL LDNLIRIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVITELPY QVNPDRLVVSIREAVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHSQ LQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLEVIARRTAYLKREAEERDHILQGYLK ALDMIDEVIALIRASESAETARTGLMDLLDVDEVQADAILAMQLRRLAALERQKILDEHN ELMRKIADYNDILAKPERQRKIVGDELDEIVAKYGDERRTKILPYSGEMNVEDLIAEENV VVTVTHSGFIKRTKADEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGRV YRLKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYDVAKYLVLATRSGKVKKTA LAEYDSPRQGGLIAVRLMTDENGENADELIGAALCNADDDIILVSKQGMSLKFEANDEQL RPMGRQTAGVQGMKFRDGDELLAMDVVQGDSDRDLLVVTNEGFAKRTAISEYRLQGRNGY GVKAVQLAEGRGSLVGAVIVEESDQIMAIMKSGKVIRSNVAEVKRTGRTTQGVTLAKPDK NDEIISIARNEETDEDDAEQAAAENGAVQNDAAVQSQAETTTENSAETGTEATSDAGDGE NVEA >gi|148337405|gb|DS264454.1| GENE 110 97338 - 97874 828 178 aa, chain + ## HITS:1 COG:no KEGG:BAD_0007 NR:ns ## KEGG: BAD_0007 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 178 1 178 178 263 100.0 3e-69 MSENNESHQAQAGAQAPRVARSASSQPLSGTEQSQAHENMAAASGGVKVREKARRGAPRA RRMSLSLTRIDAWSAAKVAFMLSIAGGIIQIVAVTLLWLLLNVVGVFDQVTQIVSSTGLD AGGFDLANVLSLSTVLSAVTIFSIIEVVLFTVLVVILTLLYNVVSTLVGGIHVTLGDD >gi|148337405|gb|DS264454.1| GENE 111 98108 - 99454 2046 448 aa, chain - ## HITS:1 COG:CAC0737 KEGG:ns NR:ns ## COG: CAC0737 COG0334 # Protein_GI_number: 15894024 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Clostridium acetobutylicum # 5 446 2 442 443 574 64.0 1e-163 MLTDEYVKRVYAQVEKRDGDQPEFLQAVREVFESLEPVVEKHPEYEKAGVLERLVEPERV VKFRVAWTDDEGKVQVNRGYRIQFNSAIGPYKGGLRFHPSVNEGVIKFLGFEQILKNSLT SLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELCRHIGQFTDVPAGDINVGAREIGYLF GQYKRIRDEYSGVLTGKGLEFGGSLARTEATGYGLCYYTQEALRVLKNDSFEGKTVVISG SGNVAIFATEKAQALGAKVVTASDSNGYVYDPDGIKLDIVKDIKLGHRGRIKEYAERVPG AEYHEGCKGVWTVPCDIALPCATQNEIDEESAKALVANGCKVVCEGANMPSTPEAIAVYQ DNGLLYGPAKAANAGGVAVSGLEMSQNSYRLSWTFEEVDNKLKSIMENIVANSLAAAKEY GHEGDLMLGANAAGFVKVANAMVAQGVL >gi|148337405|gb|DS264454.1| GENE 112 99329 - 99619 104 96 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|171741726|ref|ZP_02917533.1| ## NR: gi|171741726|ref|ZP_02917533.1| hypothetical protein BIFDEN_00817 [Bifidobacterium dentium ATCC 27678] hypothetical protein BIFDEN_00817 [Bifidobacterium dentium ATCC 27678] # 1 58 57 114 114 79 72.0 8e-14 MLLNNRLEAFEDLANGLQELRLVAIALLDLRVHALDVLISEHIFPLRDSWVINTAVSFYV LDCETHKILLKIWLERADIGWIRACKRDTSKERLVH >gi|148337405|gb|DS264454.1| GENE 113 99659 - 100102 662 147 aa, chain + ## HITS:1 COG:Cgl0854 KEGG:ns NR:ns ## COG: Cgl0854 COG1970 # Protein_GI_number: 19552104 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Corynebacterium glutamicum # 1 142 1 131 135 82 43.0 3e-16 MFEGFKKFIARGNMIDMAVGVVMGGAVTTVVNSIVNSVINPFIAMIFGKPNMDGLLAITF NGATVSFGAVLGAILNFLIIAAAVYFCILVPINKFRDMTEALLAKTKLAEQKEAEEKAAE EPSAEEQTVQLLQQIRDELAKQNAARN >gi|148337405|gb|DS264454.1| GENE 114 100137 - 100349 130 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIPAACGYAGGRFIWFAGDRVRWMVDKRLNTKKASDYSEAFNSVELRGFEPLTLSMPWRC ATSCAIAPWS >gi|148337405|gb|DS264454.1| GENE 115 100630 - 101349 699 239 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 48 232 22 212 215 68 23.0 1e-11 MTYGQRNGGNGRNGGNGRNGRGVGHRNRNRVISETTASIAGMRVAIVRKPIKNMYLRIKP PNADIVISAPQRMSQSAIERFVTERKPWIERAQRSMRQARDAQLNAQRAQNGNIGDTGAS ANPPAFVWTDEAKARAQRNIESQLPVLLAKWGPIVGRTPTHITLRLMSSRWGSCTPKTGR IRLNLQLGLMAPRFLEYVLVHEMTHLWENGHGEGFQRRMSAYLPQWRQLRRDINRQVVL >gi|148337405|gb|DS264454.1| GENE 116 101363 - 102703 1846 446 aa, chain - ## HITS:1 COG:sll0260 KEGG:ns NR:ns ## COG: sll0260 COG1253 # Protein_GI_number: 16331101 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Synechocystis # 2 428 5 432 448 237 32.0 3e-62 MSLGLNILLIFIFLLLGSVFAGTELALVSLRGSQIDQMEQEDARGKRVAQIARDPNTFLS TVQIGVTLCGFLSASFGESSIAPYIVPVIEDWGVPHNVAAPLTTIALTLIISYCSIVISE LVPKRIAMQRNEQIARAVVPAIHVFAKVCKPIIWLIGKNTNGIVRLLGFDPNETDSEVSD DELRVLVNTNTNLSKDERTILDDVFDASETIVAEVMRPRADVAFLDGSMPIAEAAAYVRE MPYSRYPVTGKDFDDVLGFVHVRDLLDIRDSKARTVADVTREGISLPGTSKLLPSLELLR KRGIHLAVVIDEYGGTDGIVTLEDMTEELVGDIRDEYDLPEEKGGERTERAAFVNGVATI EGGMTIEDFADLTGIELEDGPYETVAGYFLAHTGKMGEVGDVLSSDDGYDMVVTEVDGRR IETLEVRRHTADEDGSAAGDSAADAK >gi|148337405|gb|DS264454.1| GENE 117 102781 - 103476 699 231 aa, chain - ## HITS:1 COG:MT3694 KEGG:ns NR:ns ## COG: MT3694 COG0288 # Protein_GI_number: 15843201 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Mycobacterium tuberculosis CDC1551 # 20 225 10 193 207 139 38.0 3e-33 MADELFVDQDEVEGTASGVWSRMLAGNRRFAEGKPEHPNRGAEAREALVDTHAPEAAILS CSDARVSPDIIFDAGIGDLFTVRTAGQVIDDAVIASLEYAVDVLGVRLLVVLGHQNCGAI KQACKEYEALLHELTADAEDSLMAADSIADIDERIMNAESLMLRTVGFSIWQAHESELES AEDFERVHIARTIEQLVERSEVIQRALAEDRLMITGARYQLDSGKVEVLSF >gi|148337405|gb|DS264454.1| GENE 118 103562 - 103738 88 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486360|ref|ZP_02027767.1| ## NR: gi|154486360|ref|ZP_02027767.1| hypothetical protein BIFADO_00172 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00172 [Bifidobacterium adolescentis L2-32] # 1 58 1 58 58 111 100.0 1e-23 MYGRFRVLSGDISLMYGSPKGEKPEKCTPEVGFSHDGLPYISEKAHDKAPILPYIRQI >gi|148337405|gb|DS264454.1| GENE 119 103861 - 104061 115 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQYIYLTALALLGLCMLIFPRQLWKISNFLWTQKGDPSNLYTSLMRISGAAFLVLALILF IFCRLQ >gi|148337405|gb|DS264454.1| GENE 120 104313 - 104780 260 155 aa, chain - ## HITS:1 COG:no KEGG:BAD_0021 NR:ns ## KEGG: BAD_0021 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 9 152 62 209 211 184 62.0 7e-46 MDKSADERGNTGPTDGIKTKGDAGTLDAKLIITRRILWWIGLVLLLPFTLNLVHFDGPYL MLERILCAIPPKLASDPSSIVGLPLLEAEWFREFLTLALGIACWSVVGITKLAATNPSSH GRKILAVRIFAGIITITVLIATGITGFFLALALLM >gi|148337405|gb|DS264454.1| GENE 121 104951 - 107707 4085 918 aa, chain - ## HITS:1 COG:all4861 KEGG:ns NR:ns ## COG: all4861 COG2352 # Protein_GI_number: 17232353 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Nostoc sp. PCC 7120 # 86 918 20 982 982 358 31.0 3e-98 MTTENEQITPADAAIVSSGTGTKGPEERDLPASLKEEMDLCLQILREVLGEFDENLLAKF DEVREHALKASDERFSGILTDTNPDQDDLQKVVDIVDKVDVHDAQLLARAFTTYFHLANL CEENYRVSVLHQREAAVNEDQAVDPVNEMTCAYHQLINEMGPARAKELLDQLEFHPVFTA HPTEARRKAVEGKIRRISQLLEAHKLLGGSDKKENSRRLFNEIDALFRTSPIALKKPTPV EEADTILDIFDNTLFYTIPQVYRRFDDWVLGDKAGLVPPVCPAFFHPGSWIGSDRDGNPN VTAKVSRQVARKFSDHVLGALEIETRRVGKNLTMEAETTPPSAELKSLWNHQKEMSERLT DKAALISTKELHRAVMLVMADRLKATIDRDADLMYHSCEDYIADLKTVQRSLAEANAKRS AYGPLQDLIWQAETFGFHMVEMEFRQHSVVHSRALEDIREHGLHGERGELQPMTHEVLDT FRALGSIQKRNGIKAARRYIISFTKSAQNIKDVYELNRLAFSHPEDVPTIDVIPLFEQLE DLQNSVDVLEEMIKIPEVQARLKATGGKMEVMLGYSDSSKDAGPTSATLALHSAQERIAK WAESHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVKCRFKLTEQGEVIFARYGNPVL AIRHVESVAAATLLQSAPSVEKRNTDMTKKYADMASKLDEAAHNRFLDLLNTDGFAPWFS TVTPLTEIGLLPIGSRPAKRGLGAKSLDDLRTIPWIFSWAQARINLAAWYGLGTACEQFG DLNTLRQAYEEWPLFSTFIDNIEMSLAKTDERIAKMYLALGDREDLNKKVLDEMELTRKW VLKIVGDEWPLQHRHVLGQAIRIRSPYVDALSVTQVLALGSLRKRVDKEELTHGQKENYT YLILCTVSGVAAGLQNTG >gi|148337405|gb|DS264454.1| GENE 122 107969 - 109741 2118 590 aa, chain + ## HITS:1 COG:YPO0484 KEGG:ns NR:ns ## COG: YPO0484 COG2966 # Protein_GI_number: 16120814 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 260 417 94 260 266 64 30.0 6e-10 MSALHEHDENTERVDSSAKAVSKFHTHSIPLDMEDIERDWDKPVTEAGIAAKASVIVRVG MLDLGAGTGSFRVREMMHRIAYPLGVHVRADVNLTDIEASCTDGKDRITEVVDLPTTGVN TERIWLLEHFADWFNVNLGKGSMYHSQSDVSEGLMQHLDKRDASQVSAELSKQLKERQKA EQNQEGSDDPVLDALEMVTERAQEGDSTARPLHMRDIEAAAAAGRSNGDSVAEKPRKNRN CKPPKEYAEHFDHIGKAAGESQGVTVRQVHERLDMIERRKPLYSPAFAGLASACACASFV FLLGGGPYDMIGAFVGAGLGHWLRRRLFAHHLNQFFVTFVCVAVAALACTGMLRLIGLFD PIALQHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPSGVQRLTYVLCIILMATLAGWMVA SIVHLNPQGFEPLGLNPVINCLLRMLFAFIGVWGFSVMFNSPQRMCLVAATIGAITDTLR LEIVDLGVPAEAGAFIGAFLAGLLASAWRSAVRHGLLAPHLGYPRICLTVPSIVIMVPGL YMYQAMFHLGQFDTLNALDWAFRAFMVIICLPIGLAMARVVTDKSWRYDI >gi|148337405|gb|DS264454.1| GENE 123 109766 - 111394 2186 542 aa, chain + ## HITS:1 COG:MA0003 KEGG:ns NR:ns ## COG: MA0003 COG0591 # Protein_GI_number: 20088902 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Na+/proline symporter # Organism: Methanosarcina acetivorans str.C2A # 1 513 1 487 514 378 42.0 1e-104 MVTKDFWVLLAMVLYFAAMLTIGFVYSKRSNSSTKQYFAGGRGVGPWLTALSAEASDMSG WLLMGLPGVAYFTGAADPMWTAIGLALGTYLNWKLVARRLRRYSVVAGDAITIPDFFSKR FHDDRNIVSTIAALIILVFFCVYVGSCFVTVGKLFSTLFGWDYHLTMVIGAAIVFAYTII GGYLSVVVTDFIQGLLMFFALAVVFIGSVASAGGIDNTVAFLKGIPGFLDGTHVATPILN DAGEQIVKAGQAMFGAPADYGIITIISMLAWGLGYFGMPQVLVRFLSIRSSEEIKKSRII ATTWCVISLACGVCIGLVGRAMMPTQFATQAAAENIFIVVSQALLPSFMCGIVVSGIFAA SMSSSSSYMIIGASAVGENIFRGLLHRKATERQVMMVARITLLVMFIFGIVVAFDQNSSI FQVVSYAWAGLGASFGPLMLTSLYWRRTNKYGAIAGMLSGTATVLIWHNLVKPLGGIFAI YELLPAFIVSLLFIVVISLLTPAPSAEVLHEFDHYLDDPDDRHVDDDLVAAEIAAGEKRS QI >gi|148337405|gb|DS264454.1| GENE 124 111704 - 112804 1911 366 aa, chain - ## HITS:1 COG:DR1093 KEGG:ns NR:ns ## COG: DR1093 COG0180 # Protein_GI_number: 15806113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Deinococcus radiodurans # 44 362 25 346 351 224 42.0 3e-58 MTDETQEQQITAVGNEMSASFLAAKKRSNATLAKLEEHPEKFTMLTGDRPTGRLHLGHYF GSIRERVAMQNRGVNSNIIIADYQVITDRDTTEHIEDNVLNLVLDYMAAGIDPNKTMIFT HSAVPAENQLMLPFLSLVTEAELHRNPTVKSEMEASGHALTGLLLTYPVHQACDILFCKA NVVPIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPSAILSEAPEIPGLDGRKMSKSYG NSIMLGATAEETAKLIKKSPTDSERRITFDPIARPQVSALLTTAGLVTGRDPKDIAEEIG DSGAGALKKYVIESVNEFLAPHRERRAELAKDMDSIRDILHDGNKRANEIANETLQQVRD AMGMRY >gi|148337405|gb|DS264454.1| GENE 125 112931 - 113302 407 123 aa, chain + ## HITS:1 COG:no KEGG:BAD_0028 NR:ns ## KEGG: BAD_0028 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 123 1 123 123 160 99.0 1e-38 MGRGRQKAKQQKIARKLKYLTTDTDYDELAKELGAQEPGSGSFDPFADIEAKYSHDVDAE DETVGDGQTSSDSADDLDEYAKWAAEAAAKATSGEFPAAKAASKPHKPIPMPVPSALKPK KQD >gi|148337405|gb|DS264454.1| GENE 126 113519 - 114529 796 336 aa, chain - ## HITS:1 COG:RSc1014 KEGG:ns NR:ns ## COG: RSc1014 COG1609 # Protein_GI_number: 17545733 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Ralstonia solanacearum # 12 304 2 296 347 164 34.0 3e-40 MEMRHGKETHRATRADVAQLAHVSTAVVSYVFNNGPRNVAPETAAKVRAAAKKLNYRPNS MARALRTGSSKTLGIIVPDLSNPFFSDVYNALETNAAQEGYSTLFMASHQDPNKELDRVS RLIARDVDAIIIASAQPTSNLAAVPRKECRFVFMDQTQAIPGAKCVSTDFQAAVQLAVHH LMGHGRRNIAMLTGKAEEGLNDKRIQGWYQAHKANRLPVGPIMQAHYTRQGGYQATIDLL NSDQHTDAIFADSDLEAIGALRAMHEQGIRVPEDIALISFDGTVDSQFTWPSLSVIQQNA QAIANCVFKAATDPQNTPDLQLIDSTLVPRESCGCM >gi|148337405|gb|DS264454.1| GENE 127 114891 - 116147 1472 418 aa, chain + ## HITS:1 COG:BS_msmE KEGG:ns NR:ns ## COG: BS_msmE COG1653 # Protein_GI_number: 16080079 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus subtilis # 26 384 25 385 426 159 29.0 1e-38 MKKINKLIAGVASAAMIVTAFSACGSASSSGKKLDFITGMATGSVHLKTLQSITDEFEKA NPGVEINLIPASQDFTNDIKVRLAAKNAPDLWNTHGWSRDRYAKFLEPLQNRSWASKMKP ITKEAFMEDDGTFYALPLDIQVTGVLYNKDVLDKVGVDPNELNTWDEFNDACQKVKDAGL TCVVAGGKDTAIAGDLADLTASSWYNDGELKKLQKGKFDSSVYQKESGLIEGWAKKGYFN PDYTSATQDDIEKLMANGQAAFYFRSNLHASQIQTFNSNVNLGFMATPTESGDRYVTLGE DWAVGASKTGKNKDIALKYIDFLAKPANMTKLTKMTNNDSALKGVNVNLGKINDTYNYWV NEKSSKTVPFFDRMYLPDGMWDTLCKSTDGLITGQLNAKSAADQMSTNFTTMWAKKNA >gi|148337405|gb|DS264454.1| GENE 128 116250 - 117164 1043 304 aa, chain + ## HITS:1 COG:BH2225 KEGG:ns NR:ns ## COG: BH2225 COG1175 # Protein_GI_number: 15614788 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 21 304 21 304 304 258 49.0 9e-69 MSLQPSSPAVPTQRKGRFHGASINLFYLPVIILLVVFIVYPLVNGFFLSLTNWDGYSPDK SFVGALNYKQLFKDANFKLVLVNTLVYGVGSTIIQQILGLGLALLLNARIKGRNLLRAII YLPALVAPVIMGTMYYFIFQYQQGALNTVMTALGFQKQAWFNNPTASVIIITVINSIQFV GVSMIIYLAGLQTLDQSVMEAASLDGATGWNKFWNITLPLLQPSFTTSVVLNLIGGLKLF DMIKILTGGGPGYATNSLSTYISSVYFDAQNAGYASALGVVLFVIIAVLTYLLNVGLAKL NWEA >gi|148337405|gb|DS264454.1| GENE 129 117166 - 118029 909 287 aa, chain + ## HITS:1 COG:BS_amyC KEGG:ns NR:ns ## COG: BS_amyC COG0395 # Protein_GI_number: 16080081 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus subtilis # 24 287 12 275 276 187 41.0 2e-47 MTRKQQTQAQNPDFIGYQKGRWAIYLFLGIVAVCQLLPFYLAINVSMKPQDDTSSTLMPR LHDIAWSNWIAAVTDGNIFQSVFNSIVVTVITTLLVCVLGAMAAYPLARRKTKFNGVISA LILAMMMVPPLSILVPLYSLLVDMGGVNTYWGISLVLAATNLPLSVFLYTNFIKAIPNSI DEAGMIDGANRFTIFMKLILPTLKPVTATVVIMTGTTVWNEYALSGYILTDTSAQTIAPR VASFFAANSSNLGTAAAASLIAAAPMVIAYLFLQKYFIAGMVAGAEK >gi|148337405|gb|DS264454.1| GENE 130 118054 - 120171 1651 705 aa, chain + ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 51 703 57 705 708 447 38.0 1e-125 MLFPSISDTDEITRITLTRPTIGDDLPDVLGVFALSSADGMDDLPKQSPRPTPLLVEHSE DVFLRPGIRGQRVSVDSLGSLLAGTAWSPRFVVSNTFGDEDHLTIDAKDDDAQLALRTEL ETLKGGTLRVRHTLTNTGDSEYLLDALNVHVPLSDDLTEIMDFTGRHEHERDPQRRAIAD GTWLRECRYGRPGFEGQIMVAGTPGFDFGHGRVMLVQLAWSGNSTLEVDRNSSDEAGINA GELLSPSEVTLGKDESYSTPWVMITASNAGLDGISASLHTWQRSLPEHPAKQPVILNVWE GVMFDHNLDRLLEIARRAARIGVERYVLDDGWFHLRRDDHAGLGDWWVDPDVWPEGLTPL VDAVHKLGMEFGLWFEPEMVNPDSDFYREHPDWVLQASNRVPILQRNQLVADLSNPAVFD HIHDAMFKVLSAYDIDYVKWDHNRNLLEAGSQVRGGAPAVHQQTLAYYRLLDTLRAEFPH IAWESCASGGGRIDMGVVERVRRFWNSDDTDALARQLIQRWTVQTVAPELLGAHISQPSS QQTGRTYSIAFRAATAVFHSFGIEWDITKASESDLDELASWVAWYKANRDFLHSGRFVRL DVADSAVLAHGVIADDKSHAIIAHVQMGESQSNRGMWLRIPGLDPLARYKLSWTGPEPVS AALESLNEVGPIGNATMTGAALATVGVRIPRCKPETIRLIEITQC >gi|148337405|gb|DS264454.1| GENE 131 120262 - 123642 2766 1126 aa, chain + ## HITS:1 COG:no KEGG:MTES_1349 NR:ns ## KEGG: MTES_1349 # Name: not_defined # Def: hypothetical protein # Organism: M.testaceum # Pathway: not_defined # 14 972 7 892 900 662 43.0 0 MPFKPRLRRTSIGIVAVASMLLPLGAATTAAVADESKAVQTLNVDYGTETGDFYGGASGM LYGVGDDGSPTDAIVDGARVYVTSQKPPSGLQHPSADVLAVENQFFSNGGEELVVNLQDW YPDWPYTSGKRPGDTRTYKLDGDVNASDYGTYTETGNGTWDFDEVLEVVMNKILANAEHP DKIVFMPFNEPDHANWYGYGNNTGAKNYAQFLKDWNEAYGVIQKVWNQYKNGEKTNANGV KPTADHALIAGPGDSSWRPNTTKKLLETGKANNTLPDVVVWHELGSGSIGSYPGHYKQYR SFEKELGISPRAINISEFGQMRDMSVPGQIIQWLSLFEETKVQAQTAYWNYAGNLNDNMS RANGANGAWWMYKWYGDLRGTTTVKVTSEHPNTTDNLQGVAAIDKQDKKATVLYGGANDQ IDDATSWGTGANTPVKVHVTGLDSQIFGTKVDVQVRESAYVGTEGVAAAPRVVNVMSNVD VVNGTLDVTTNSVDRYAGYQLVITPHQDTQTAVDDANDGRSLQVVETEDTKLEGKACKVT KDANTGSNTKLMFSGNGDVGCFNSGAKMTWDVDVPADGDYRLQLITAPAGVPGTNGVFVD GKEVGSLEIGAELALRDQVKWKYRGSAEIVLKGLTKGKHSITISSTDLDNETDKILLYQV SDGKTGPVDQVTYPASDMRLENGTTLTWDGNGNNGFANLNGGTVDVFAHAWEAGYQDVTV AYNASMGAQIALSINGQAARTITAPRNGLQTSTVRVAMSEGINRLELSGAAGILLKNVTT ARAGDGDANAVKVEAEDSSRVTLNGGAAVETPSTYTNASGKSFVKGLGSQFETEESGKAG FGDRTRVVADANHVPTVHEDNKGTMTIKGVPAGTYNMVVHFSNEAFIGKHDYNPQVVDLG LQVRQNNVEIARGSFRYTYTETNFLNRSINVTTDGGDLTLGNWDKVGDLKAAVSWGVAPN VDSVTFYPVTIGDQIDDGGVDTSALEEAVSKANQLVQNDYTAESWNVLQTALAEANSALD STDQSAVDAAAQKLNEAIKALVKAGSSENNGQNGGSQNGNSQNGNNQNGGNTGAKDDSKS DDAGDNQNAGSNPLGRTGVAVIGVFAVAAVLIASGVLLTRMRKRNA >gi|148337405|gb|DS264454.1| GENE 132 123832 - 124269 474 145 aa, chain - ## HITS:1 COG:no KEGG:BAD_0029 NR:ns ## KEGG: BAD_0029 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 144 1 144 145 273 99.0 2e-72 MAVIREQDLGKGRAAFEQWQDAAHNIFSEQLPADDDAAFDFRLNFSPRLPRQLWAMAVRY SLYLLEKKAPGEGVEVRVAPWGAIKILDGPASDPHNLTPPDVIELDPDVWMRLATGITSW QEEKDAGRITAVGERDDLSGLLPLV >gi|148337405|gb|DS264454.1| GENE 133 124599 - 127055 3640 818 aa, chain + ## HITS:1 COG:slr1367 KEGG:ns NR:ns ## COG: slr1367 COG0058 # Protein_GI_number: 16330178 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Synechocystis # 22 818 47 842 855 722 48.0 0 MTEITAPKSAVTAEQFADEIREQLKYTQGVTVEQAKPADVYVAASAAVRRHLVDSWMKTQ ADMVNGNTKAVGYLSAEFLMGKQLENALLNAGLPDQFDKAVEALGFDAQEVIDAEYEPGL GNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIFKQEFDENGKQIETPDYWLANEEPWG HIDYNRDQKVSFGGEVVEENGKKVWKPAWSVRAVPVDYMVPGYASGRVNTLRLWTAKSYD EFDLLTFNKSEYLDAVKPQVEAENISKILYPEDSTPQGKALRLEQQYFFVSASIHDAIRV FYPGQDKPDLTTFADKITFQLNDTHPVIGIPELMRVLMDEYGYDWDTAWKITNKTFNYTC HTLLPEALEVWPSKLIGELLPRHLEIIEKINDQFEAELKAKGVDEATIKDMAIYTGDSVR MAFLASYGGSHVNGVAELHSQLLKDVTLKNFSDVYPDKFTNVTNGVTPRRFIKLANPRLS DVITEGLGTDKWLSDLELLKGLIPLADDDEFVKKFAAVKQANKVDFSNFAKRKYGFDIDP NTMINTMVKRLHEYKRQALKILSVIADYADIKSGKVSADDIMPRTIVFGAKAAPGYYLAK QTIQLINNVARVINNDPDVKGKLNVYFPWNYNIELAMNLIPATDLDEQISQAGKEASGTG NMKFALNGALTVGTLDGANVEIRERVGAENFFLFGMTEPEVSALYAKGYDTKGLSREYYE KDPQLKAAIDMVADGTFSDGDKDTYKDLVNDWLNKDYFMTLADFRAYMDIQAQIEETYRD PMKWSRMAVLNVANSGYFSSDRSIEDYLERIWHTGPLK >gi|148337405|gb|DS264454.1| GENE 134 127382 - 127612 406 76 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0127 NR:ns ## KEGG: BBIF_0127 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 59 1 59 73 107 94.0 2e-22 MENKSSNGWKFFALLFGALLAGVVGLYIYKQQNPDYDPWEEPWENSSSPVDLGLTKDAEP EADATAAAPAAEPEAA >gi|148337405|gb|DS264454.1| GENE 135 127753 - 128541 791 262 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 27 245 66 266 284 99 33.0 9e-21 MAYQRFSLFPDSPSFKDLFSARSLRYRWRNGDPVITTAIMAICIVVWAIEAVLFLVWPEG GNAFVNAGMLLPATAVRHPWTFITSMFLHQPTSLWHILFNMLTLWCVGPVLERMMGHWPY LALYVLSGLGGGAGLMVWAVCSPSGWMTAAYGASGALFGLFAAILVVYRRIGIDIRSMLI WMLINFLMPVITPGIAWQAHVGGFIVGGVLAWLLVTGLHAFRGKSLTWRTTVYGITVFVV VVAIIVGCNAGNPLMHMSLLYQ >gi|148337405|gb|DS264454.1| GENE 136 128550 - 129143 144 197 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRGIDDIRAGGPLRQFVAGDLPARDLVERGRQVEVRRPFGFERQVTHVFIAMRLGEGARH VVEQWSVTHGSSPLLREYLPCRTRILRPWRIGIASLSIAFVILSFLWITSGQMWMNVDNA HILCLSQRRTTKYRRRFSPFLWGVDIGYPQFSHRKFLMFRHFVNILVDNPPRYPRLTHRS DLTYPQSYPRMWKTTCV >gi|148337405|gb|DS264454.1| GENE 137 128937 - 130211 1456 424 aa, chain + ## HITS:1 COG:no KEGG:BAD_0033 NR:ns ## KEGG: BAD_0033 # Name: not_defined # Def: N6-adenine-specific methylase # Organism: B.adolescentis # Pathway: not_defined # 1 424 1 424 424 828 99.0 0 MSDGPLLNDVTRAFAEAHRNEDVRDLALKTKRTADLDLPAALDQIAGWQIARNKLPQWAA CADIVYPAHISMEQCSSQFTAQYKAEIARRLLRSLPQSAGQTANDATMTDLTGGFGVDFS YLARGFGHATYVERQSHLCELAAHNMAALGLTQAQVVCGDGVEYLRAMEPVQLIYIDPAR RDEHGARTYAIEDCTPDVLALRDLLLAKARYVMIKLSPMLDWRKAVDDFAGTVAEVHIVS TGNECKELLLVLDGKVAGITSDAAAADTRAPHVYCVNDDQRLDYDAAAYTRGLRIGDAPL PHELRYLYEPNASIMKAGCFDVVEARFGAVQIGPSSHLFVSDEPVDGFPGRGFAIETIGG MGKKELKRLLSGLDRANIAVRNFPLTAPQLRKKLKLADGGDAYLFGTTMQGGDHVLIRTA KISR >gi|148337405|gb|DS264454.1| GENE 138 130391 - 130858 739 155 aa, chain - ## HITS:1 COG:no KEGG:BAD_0034 NR:ns ## KEGG: BAD_0034 # Name: not_defined # Def: putative septation inhibitor protein # Organism: B.adolescentis # Pathway: not_defined # 1 155 1 155 155 265 100.0 5e-70 MLMADEELHETTADDQKDLQSADDTAAVEETTEDVVDKTSVDEDQSDDDDLDIPMDRVEA VLNATVDKDSLSPQMQRMMNRQAENTRRVEESIKGTKSNPRWFVPLFCALMIIGLVWAVV YYLTTDYPIPHIGAWNLAIAFAIIMVGFIMTMWWR >gi|148337405|gb|DS264454.1| GENE 139 130994 - 131773 1029 259 aa, chain + ## HITS:1 COG:Rv0012 KEGG:ns NR:ns ## COG: Rv0012 COG3879 # Protein_GI_number: 15607154 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis H37Rv # 49 221 61 232 262 136 47.0 4e-32 MAKHTGKHSAKRSKAAGVAAFLVLLFSGFLLSTNLRVNRSVVVSNDTAELVEQRVKKVNS LRSEIDALSTRVNDLSKTLDSQNADGSQDSESAGNGTMLPAVEGPGLVVTLDDSPLWENM VDANGSSANINDYVVHQQDIEAVVNALWAGGAESMQIMDQRVLFNSAVRCSGNVLLLQGK KYSPPFKISAIGPVEGMRKALDDSEEVSIYKQYVSAFGLGWQVDEKTKLHFDATDALQQP LQYAKALENDKNGESQEGK >gi|148337405|gb|DS264454.1| GENE 140 131780 - 132874 1253 364 aa, chain + ## HITS:1 COG:Cgl2874 KEGG:ns NR:ns ## COG: Cgl2874 COG3764 # Protein_GI_number: 19554124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Corynebacterium glutamicum # 21 187 6 154 255 97 34.0 5e-20 MKHVTSRGGRTKSALWTILGILAELMLTAAAICALYIAWQMWWTGVQSEHNQIETRQSVS WSDPGKSGNVTVAKAQQGDPPVQPQSATEGELIAQIYIPRFGSQWQRNLVEGTDLTQLNK HGLGHYTDSQMPGQIGNFAFAGHRNGYGQPLGDVDKLQEGDPIIVRTQDYWYVYHYTSYK IVLPTQTEVVAANPENPGAAPTKRMLTMTTCEPKYSTPTHRWISYAEFSYWAKVADGIPQ ELASQNANGTVKFVNNEQSSFLSSIDTLKPWIFGALAAYVIIFISAAVAWRWPYLADVRA GRRKKADFSIYGGLLRVQPGVLPIRIVLLLLLVFAACASCFEWLFPWAATNIPALQEMSN YTAI >gi|148337405|gb|DS264454.1| GENE 141 133013 - 133657 874 214 aa, chain + ## HITS:1 COG:ML0015 KEGG:ns NR:ns ## COG: ML0015 COG0512 # Protein_GI_number: 15826878 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Mycobacterium leprae # 6 197 2 193 232 204 49.0 9e-53 MTDSARILVVDNYDSFVYTIVGYVKTLGATVTVVRNDAIDPSAPGVIDDYDGVLISPGPG APSESGASEDMIRLCAAQNKPMFGVCLGMQALAEVFGATVSHAPTIMHGKTSLVEHIDDE IFEGVANPMVATRYHSLAVEPDSVPDELVVTAWTQDDHIVQGIKHRDKPMYAVQFHPESV MTQDGYRLLANWLKVCGQESAVEKSIGLQPKVSE >gi|148337405|gb|DS264454.1| GENE 142 133956 - 136016 2579 686 aa, chain - ## HITS:1 COG:Rv0014c_1 KEGG:ns NR:ns ## COG: Rv0014c_1 COG0515 # Protein_GI_number: 15607156 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 13 468 10 425 428 298 42.0 2e-80 MNINMPTSLAGGRYQLGQLVGRGGMAEVHVATDTRLGRTVAVKIMRADFATDSIFLERFR REAHSVAQMNNPNIVNIYDSGEETVTTETGEIEHLPYLVMEYVKGQTLRDILKVNGALSQ RDAEQVMMGVLNALEYSHRMGIIHRDIKPGNIMISEQGVVKVMDFGIARAIDDSAATMTQ SQGVVGTAQYLSPEQARGESVDMRSDLYSAGCVLYEMLTGRPPFTGDSAVAIAYQHVSEV ATPPSTIVPGLPKMWDSICAKAMAKDRQNRYATASEFKNDLLTFMNGGVPMAAAFNPLTD LTNMKARKQAEMDAATVPMAPATDAPTQAFNPVTGQFEAVPNPNGGVETKTRAEQRAKAA QERKKKQIIIASVVGSIVVLLAVIGIFFALNGHKNTADLVSVPDFTDTSNISQARVEEQL KALGLKLDARDDSTSSQPKGTITKQNPKGGKKVAKGSTVSVWFSTGPQAVSVPDVSGKTQ EEAKGILEAAGFKIGNVMTVDSASIEKDKVVNTNPAAHSKQTKGTIITLYISSGMTKIPD GLVGQAKDSVIAQLKQAGLTQITIESEYSDSVQSGAVTRIDPGSGSTVEAGTAVTIWVST GKQQVSVPFVANSTLAEAKSILEAAGFQVSVNGPQDDDATVVSMSPNGGSQADSGSTITL TTKKSSSDTPSTDTSNGNNSNNQQGN >gi|148337405|gb|DS264454.1| GENE 143 136013 - 136957 979 314 aa, chain - ## HITS:1 COG:ML0017 KEGG:ns NR:ns ## COG: ML0017 COG0515 # Protein_GI_number: 15826880 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium leprae # 6 254 6 257 437 196 45.0 7e-50 MKLVEGQLIHRRYRLDSRLAQGGMGEVWKGYDIQLGRPVAIKALRGDLGVTQEAKLLRLR AEAHNSANLAHPNIAALFEYYEHDGIGFLIMEYVPSKSLADLYHEQNGPMDPIKLLPILI QTARGLFVAHSHGVIHRDVKPANIMVSDSGEVKITDFGVSYSTNQEQITQDGMVVGTAQY ISPEQAQGKHATPQSDIYSLGVVAYEGLCGHRPFTGATPVDIAAAHVNNPVPPLPDTVDV QLREFVMSMLAKDPLDRPKDALVVSRTLSRIERRLLDQQTQLADTMVVSSGGRLPRRVVS KPHISVSNDWKEQG >gi|148337405|gb|DS264454.1| GENE 144 136954 - 138420 1680 488 aa, chain - ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 486 1 488 492 295 39.0 1e-79 MNKSLRQLFTIVVALFVILGMSTTIIMAIRANQLTNDARNVRALYHEYGAPRGSILAADG SVIAKSDPSNDSFSYQRSYSAGELYAPVTGFFSISQRGWSGVEASRSSLLSGQSEQLLWQ RFKSLFTGQENKGANIETSIDPKIQQAAYNSLGSTDGAAVAIEPKTGRILAMVSTPSYDP NQLASHDMSQANSNYGVLSQDATNPMLNRATSQLYPPGSTFKTVVAAAALETGQYQPDTQ IPAGASYTLPGTVTQLTNDVPQADGADGKISMEDALAYSSNTAFAQLGVSLGDNAVSSMA KKLGFDSPITVDGSDYTGTPWVSVTSKFPTDINDDKLALASIGQGDTVVTPLQNAMVAAA IANDGKLMQPTLVDRVRSADLSVISQTKPTVMSHAFSADTANKLTQMMEAVVTKENTNLA INGVQVAVKTGTAQIGNGNTSIDGWVIGFAPADDPKIAVAVVVHNVDLYGSFAAGPIMKA MMQEALAE >gi|148337405|gb|DS264454.1| GENE 145 138413 - 139966 1661 517 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 454 25 463 469 326 41.0 7e-89 MLLFSMLLCAVAFFQMFERTTNGFPQNYVWMLAFVSALFLTTWGLLLRFQPHADQSVMCC VLVLTGIGVTMIARLDQDTKTTVAFRQLLWLAIALVFANLLVVFMRDYRVLRRFSYVSMV IGIVLLLSPMLPVVGSEQYGARIWVKIPGLGSFQPSEFAKLFLAFFFASYLFDHRDQLAV GGKKILGIQLPRIKDMGPIIVVWIVSMGVLVLQHDLGTSLMFFAMFVSMLYVATGRKSWI VIGFIAFAAGAVAAASIFSHVGSRVDAWLHPFSAAQYNKEYGGSYQLVTGIFGLASGGLM GTGLGQGHPSITPIANSDYIYAALGEELGLTGLMAILMLYLLIIAAGMITAMKIKDGFGK LLASGLVFTMAFQVFTVVGGITLVIPLTGLTLPYMAAGGSSLIANYMLAALLIVISNSAN RPESEIDSDTFQQEAVRVLRERERNRRTEIAGNTRSGAAKASAIPAVRASHAGAAGQAGH TVPANQTSQAGQTDQSNPTIPITGVLPTIDQQGASHE >gi|148337405|gb|DS264454.1| GENE 146 139993 - 141576 1783 527 aa, chain - ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 18 247 11 234 237 194 46.0 5e-49 MPTSTASQQLFMYSTVVSDVGTVRSNNQDSAFAGEHLIAICDGMGGHAGGDTASTIAIRS LAHIEQDNVDGDVQVVSHMMATSVMAAHDAIVGKAKRERRLAGMGTTVTSVALVAGCWVL AHIGDSRAYLLHDGHLVRMTSDHSYVQHLIDTGRISEAEARNHPQRNVVMRVLGDFDIDS RPDIAIRKAHPGDRWLLCSDGLCGVLEDSTLEEVLSTCADQEECAQRLVSMALRAGSTDN VTAVIADATLALDADAFDLPHQTPLVGGAASASLETIADIVNEPVASAPPLREGKQSPAA RAAALRSGKDPNEEPKQPEQRVAQPSSVREDNGDRVNTDTGEIPIVQKRNGRISADPNDP EVAKAIRNEHIEERKTKRSRKFRNRIITILIIILVLLGVAGVGVGTYRWSQTKYYIGDNN GKVAIFQGVPTSIFGAKLSHAVTDTNMKTSDLPPSWREQLDQGISFDTYGEAKSHTRLIK KQLNDAKRKQEARQQEKAEAEQKAKDEAAKKATDQAAQTNKSGGDKS >gi|148337405|gb|DS264454.1| GENE 147 141582 - 142097 355 171 aa, chain - ## HITS:1 COG:Cgl0046 KEGG:ns NR:ns ## COG: Cgl0046 COG1716 # Protein_GI_number: 19551296 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Corynebacterium glutamicum # 10 170 9 152 154 77 32.0 9e-15 MLTELTFAILKYGFLVLLWIFVACTVRSLYRDIETLSPRKSRAHRRKERAARKAVESPAP VAAAAPSASAATNAKPTLLVIIDGPLAGSSVPLAGNTITLGRSASNTVVLDDEFVSSHHA RVYTDPATGRWAIEDLGSTNGTVVNHQRLNAPMILGARVPVRIGATTFELR >gi|148337405|gb|DS264454.1| GENE 148 142126 - 142833 881 235 aa, chain - ## HITS:1 COG:Rv0020c_2 KEGG:ns NR:ns ## COG: Rv0020c_2 COG1716 # Protein_GI_number: 15607162 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis H37Rv # 149 226 13 88 92 58 42.0 9e-09 MSVLDRFEKSVEGAVNGVFAKFGSKDLKPVDLSSALEREIDKEAMPVTRDRTVAPNEYRF KLSTPDFNNIVEWGAETLANELADNLTQYAKSQNYAFVGPVVVIFEEDLELSKGDYRLSS ESVQGNTVPVTTDAQTEDCPMLEIGEHQYLLTEEKTIIGRGSDCDIVIDDPGISRRHMEI DVTDNGNTVIARDLNSTNGMYVEGHHVEAATLLDGNTITIGRTRILYWASSQEQE >gi|148337405|gb|DS264454.1| GENE 149 142983 - 145499 2689 838 aa, chain + ## HITS:1 COG:CC2154 KEGG:ns NR:ns ## COG: CC2154 COG1506 # Protein_GI_number: 16126393 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Caulobacter vibrioides # 605 797 511 694 738 119 37.0 2e-26 MNDAIDEFPGLKARTLRFTCGAPRSARAIGDGSRALFLRSDGPEDTVTSLWMSVIGSDGD TDEILLADPRTLLADADAEDVPAEEKARRERAREGGSGIVGYSVDAAGNRVAFTINGQLF LTDIAAGVTRGIAIDEPEFKPVLNPRISPDGRHIMYTTGTYLVDVDLADVSDTTDAAEDA GDAVSIVASVPQDDADDVADTQDGTQDDAQSDAAESQAGEWKIGLAEFAAGEEMDRYDGF WWSPDSKYVLFETFDASHEQTWYIADPADPTKPAQARRYPQAMTANADVHLTLLELGYDT DGCYYGGIAHNVEWDRESYEYLAAVSWTEGHEPLLLVQDRLQQHDQVLAVHVGEPIVTMS APENGFTDEDGSEVETFSIAIPEYAPGEEPGTTRVLEEHSNDCWLDLIAGTPAYTPDGRL VCAMNDMDADTNRLTVDGTPFTPKGLQVREVLDVTDDDVLCVVQRTPELLPAADLPFLWQ SNADDHDARSFDVVSIRYDGDWEPLTCTPGQWTMSRSGDGCVVTGRGMDDARSQMQHCMN VRTTEGDVADGVADGAEMMSMVVSPIENHSEIPGFTPNVRFTRLGERGLYAAVILPSADS AYAHADQLPVLMKPYGGPGFQQVVESQSFYWDAQWWADQGYIVVTADGRGTTGRGPKWDR AIYENMKAVTLEDQVDAVHALPDAIASLAAETGVSMPKPDLDKVAMIGWSYGGFLSALAV LDAPDAFAAACAGAPPTDWTLYDTHYTERYLGLDPATYERNSIVADAPKLSRPLMLIHGF ADDNVTIANSLRLSQALMAAGRKHTFLPLNGITHMTNDETVARNLLLLQRDFLADALV >gi|148337405|gb|DS264454.1| GENE 150 145723 - 146952 1103 409 aa, chain - ## HITS:1 COG:no KEGG:BAD_0046 NR:ns ## KEGG: BAD_0046 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 409 21 429 429 750 97.0 0 MRADHPKLWHPIRITIVVITVWWILFCLLLAPTDNPAAIVWTIIEIAVLLLSPFFPKSMS LLFLIMSQSGPWLIPGADVNSLPGILYTFGMLAYETNNLVALLLLAYSIGDQLFRQLVLG TSNSNPVAIIAMVSLVLMLGCGLRWNATMTASRAEAEQAKTRLREMESRNHIAEAIHDAV TGDLSAAAFVAQRRIDALSGGDDGDGSASTDGDDGKNADERRDELDKWTQVNDYILSALT NVHRVIDELDMDVTVLEEDADGKAFSDLLKATMAGGDRRLRALGFDITSILHVAGGAPSA SPSLAGIANDLLRETYANIARHAQSGSKADLSVILKPNAVEITQINQARTTETDRTQPGG HGLAYFSKQLESHGGKLETTLRDGEWTLFAYLPIPVPETLPPLAGHPES >gi|148337405|gb|DS264454.1| GENE 151 147002 - 147667 753 221 aa, chain - ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 15 218 2 207 208 73 26.0 2e-13 MNPTKSAAPIPKIHRVALVDNDPRALESLSLLIEAKVPTAYVVWTATSGDEAIERCQRND DNLNLLVLDMSMEGLQGPAICHRIRLMDRHLPILGITSFSINSYRSRLMEAGAQGLIGKE DSDQLAKAIERLCGGNVMEGFEPPALANVRIRREEETSPRLTVREEQIISLCADGMLDRE IAERLDISENTVRKHMQGILKKLNCKTARQAVALWVRSHAR >gi|148337405|gb|DS264454.1| GENE 152 147676 - 147837 106 53 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486398|ref|ZP_02027805.1| ## NR: gi|154486398|ref|ZP_02027805.1| hypothetical protein BIFADO_00210 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00210 [Bifidobacterium adolescentis L2-32] # 1 53 1 53 53 73 100.0 5e-12 MSFCVSFVMLCTMQPAGTMAPSNGKAAIFADAARGTAAAIIDCPPPLYWLCGK >gi|148337405|gb|DS264454.1| GENE 153 147933 - 149021 1107 362 aa, chain + ## HITS:1 COG:CAC2246 KEGG:ns NR:ns ## COG: CAC2246 COG2267 # Protein_GI_number: 15895514 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Clostridium acetobutylicum # 84 356 91 360 363 155 32.0 1e-37 MWDSYDESMTLRLLDEANYDAEMESKVLPALDACMTEGWMDPATVDWNGDALPKLDEPGR LHYCCYDAHKFDVLREDGASGIFRGVVVISHGFTEFARKYSEMAWYFLLSGYSVCILEHR GHGHSAHDVSNPSLVWIDDWRRYVADFAAFADTVGREYACGGPLNLYCHSMGGGIGAAVM EHYPSLFDKAVLSAPMIAPVVGMPTWIARIATGALCGLGFGKARVFGHTDFSPELDLDEH KGASEARVRWFHKQRVDDVACQTNAATFEWAHQAMALSRAVLKPDMCGAIETPTLLFQAG RDVWVLNGPQDDFVERVREGGGSIEKIRYGKSLHEIFSMPNTVVGPYVNKILDFLSAPAD SL >gi|148337405|gb|DS264454.1| GENE 154 149095 - 149997 1207 300 aa, chain + ## HITS:1 COG:SP1447 KEGG:ns NR:ns ## COG: SP1447 COG0697 # Protein_GI_number: 15901297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Streptococcus pneumoniae TIGR4 # 16 299 7 289 298 132 35.0 1e-30 MAEKTFERTPKDLIIGIAMTLCGGVLWGVNATVSKILMGTYHASPLWIACVRELAAGVLF LTCSAIMTPKLLTGALRDRKSYPRLLATAIICVLLVQVAYLESINWTNSGTATVLQSLNL LFVLGVVCLRGRRLPGVREGIGVALAFAGTVLIATGGDFTTLKLPLVGLIWGAINAASTA AMVFLPVKLIERWGNFTVNGIAFLISGLVLLPFVRPWDTAPQLDWLGVGLMAFTVIGGTF GAFWLYMAGVVRVGSMRATMLGTSEPVMATISAVAWTDAVFEPTDLVGFVMILIMVFLVR >gi|148337405|gb|DS264454.1| GENE 155 150142 - 150603 724 153 aa, chain - ## HITS:1 COG:CAC3714 KEGG:ns NR:ns ## COG: CAC3714 COG0071 # Protein_GI_number: 15896945 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Clostridium acetobutylicum # 37 136 40 137 151 82 47.0 3e-16 MAMFPALMNDTMFSNLFDDPFFEGWRNMDRAAACDPNMSAGMMSTDVRETDKGYMVDIDM PGFKKDDISLDLQNGYLTVSAHRNSSHEDKDDNGRWLRRERYAGSCSRSFYVGEDVKDSD IHASYKDGTLCLEMPKPEAQQQVETKHQIAIEG >gi|148337405|gb|DS264454.1| GENE 156 151275 - 151454 64 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEVAGLEHLLRKRGFLNKGWLHRLEVHRASSLLASHRFVHSLCEYGGATRRFVPQIVKV >gi|148337405|gb|DS264454.1| GENE 157 151469 - 152875 1553 468 aa, chain - ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 59 462 6 413 418 471 54.0 1e-132 MNEPQTGAVAHETSAANAAARATHDAAGNTTSAASTENLIEHPRGAEPGKPGRRDAFYFE QKTRLPDAADGKGRGGARYGRTGIIHTPHGDIHTPAFVPVATQAAMKAVLPETMKDLGAQ CLLSNAFHLYERPGEQVLDEAGGLAKFMNWNGPTFTDSGGFQVLSLGAGFKKTLAMDVTG MKSDDVIAEGKERLAFVDEDGVTFKSPLNGSLHRFSAEISMGIQHKIGADIMFAFDELTT LMNTRGYQERSVERTYRWAQRCVAEHKRLTEERLGKPYQALYGVVQGANYEDLRRHAAEQ IASLDFDGVGIGGAIEKRIIGDTCAWICDAMPESRPRHVLGIAAVDDIFACVENGGDTFD CVAPARCGRNGAIFTRHGRYNIKRAQFKHDFSPLEEGCDCYTCTHYTRAYVDHALRAREF NGFTLATIHNEHFFVKLLDDIRESIDGGYFNEFRDETLAKFYENGSKG >gi|148337405|gb|DS264454.1| GENE 158 153098 - 155017 2774 639 aa, chain + ## HITS:1 COG:Cgl0852 KEGG:ns NR:ns ## COG: Cgl0852 COG0265 # Protein_GI_number: 19552102 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Corynebacterium glutamicum # 152 585 37 441 441 184 36.0 4e-46 MAEDNSDQNIAQPQDGTQQTAPQTPSENVADEAQTSVTEPIAVPNAGEQPTTALPTVDAA DGTAGNTADDTPDYASAAGERTVINNATQDAPTEQYRPAPEYGAYGPVPTPPAGDASGQT VQQPQYGAQQQGQPQDNRPSFFGAFGNPYTTGNQRNNGNPFGNPFGGSSAQNGAQQNNQQ QPQYGANMPPAGPGNRNPFGAPGQGFPNQPNQTPVVTKQKSGMTSHVVTAVVAALVSGAL CLGVGFTAITNGWVHAPTSSSLSDVKSNTSGSGSAKAKSGTAVDWTAVAKEVSDSVVAID VATSDGEAKGSGVVISDKGYIATNNHVISGAQQIQVTLASGAVYSAKVVGTDTTTDLAVI KLDNPPSDLKVAEFADSDNLAVGEAVMAIGNPLGYDDTATTGIVSALNRPVTVTDDDNNA IVTNAVQIDAAINPGNSGGPTFNAAGQVIGINSSIASTASSSGTAGSIGIGFAIPSNLVK RVTNEIIDNGSVKHVVLGITIKSSSVEADGVTRGCAQVQAVTDGGPASKAGVKAGDSIVA FNGKAVNNNYSLLGYVRASAMGDKVKLTVVRGGNTMDLEVTLDQEETKTNSSNKQEQRQQ NNGNDDNGNGQNGGSQNGQNGGNGNNGDGGGLFDPFGLW >gi|148337405|gb|DS264454.1| GENE 159 155373 - 157682 2784 769 aa, chain + ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 36 765 14 591 593 335 33.0 2e-91 MRRIISICKEVPLLPIAIIAAIPLALLGSWRPWEAAGVSLTFGPFNPGVGQWIVIALVVY TIVVTVIGMIDDLRHGHVGVDLLAVIAIASTVAVQEYWAAWAVVLMISSGEAIEEFAQSK AEGNLTALVDAAPRTAHVVTLPGVGARAAAAGADGTAGDAEGDMTADGFRKVASVDVPNA AETNKSTTQTKPYDAAGEHFETVPVDQVKLGDVILVLPGETVPVDGELLSGVATLDLSNI NGEPVPREVYAGARVLSGAVNGSTALTMRATQLAQDSQYQKILELVSSAQESRPTVVKTA DVLAVPFTILSLAIAGIAWAVAGTPLRFAQVLVLATPCPLLIAAPVAYVAGTGRLAKAGI LIKAQDVLENLGRVSHIFFDKTGTLTVKQPQVVRVERPFENSSPYNESHILMMAGVVEGY SVHILSKGIAAAGQKAMQELYARYENGQRLCAERDLPGHGRDYPVVKNIEEQSGKGVSGE VNGHAVRVGRFAYVTADEAGFTHVLGAGAAAGTAAGAVADSAVGDSATGTAAGASKKPEV NSLFAPLEPDEMAAYVAIDGKLAARIVLRDVPRENAKSSLEKLHRLGVKKLSMLTGDKEA SARIIAGEVGIDDVQSELFPEGKVAAVKNATEDAHQNQPAWDKVVQRVVGESMTRQVTMM VGDGVNDAPVLAVADIGMAMTDGTSTAASESAQVVIMNDDIASVPRAIAIARRTKKVMLQ AVLVGLGLAIIGMVAAAFNLIPVVVGAFMQEAIDVVSILWALTALLDRE >gi|148337405|gb|DS264454.1| GENE 160 157737 - 158747 991 336 aa, chain - ## HITS:1 COG:ECs2474 KEGG:ns NR:ns ## COG: ECs2474 COG0252 # Protein_GI_number: 15831728 # Func_class: E Amino acid transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D # Organism: Escherichia coli O157:H7 # 3 333 6 336 338 233 39.0 3e-61 MRIHITYTGGTIGMVESPNGLVPGADMRGWLRRLIEDAHLDSSLFSFTELDPLIDSSNAT PDNWQTMADDLRAHRDDADAFVVLHGTDTMSYSSAALSYALTGFGKPVIFTGSQHPLGKI ESDATANVTGALNAAMSGRFHGVGLFFGHHLFAGNRVSKSSSWAFEGFSAPSTGPLARTG TPWHWYAGDSAGSSCGWTSPLPYSRHDVAVIDMAPGISAARLAAMLDPRPEAVLLRAYGV GNVPSDEPGLTDVIADVLHDGVPVVIASQCQQAEVLLGHYETGDAIARAGAIGSGDMTLE AAYAKIMFLLSQGVDAADFGTWMRRNIAGEISPSSM >gi|148337405|gb|DS264454.1| GENE 161 158931 - 160382 2260 483 aa, chain + ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 4 477 2 446 457 356 44.0 6e-98 MSETNELRIAVIGAGPAGVYSSDIFLRQLGKLGEELGLGTKARIDLFEKLPVPFGLVRYG VAPDHPSIKFIASALEKTLDNPDIHLYCDVEFGKDVTLDELLERYDAVLFATGAVEDKPL GLPGADLDGVYGAAKFVEWYDGYPTGAREWPLEAEEVAVIGGGNVAMDVARELMRNADDL KERTDIPDNVYEGIKANKAKTLHLFIRRGVAQAKFSVQELREMEKLPGVQLIINEDDFDL DDDTIEEAGKDKLTRQMVEELFTIREMAEDMEDDGDTDFEGNPADRKYYIHFNSAPVEVL GEDGKVKAIRVEKTTTSADGKMTRTGEFEEYPVQAVYHAIGYKPATAPGIAYDERRAHLA NANGDGRITTEASGEGAQVRERLYATGWAKRGPVGLIGSTKSDALLIVTNMLEDLSKAAE GGRVAADRDPESIDRLLASRGVKPIDFAGWKKVDAYERAEGAKEGREHKKVIDPEQMRAL AHA >gi|148337405|gb|DS264454.1| GENE 162 160726 - 161781 960 351 aa, chain + ## HITS:1 COG:no KEGG:BDP_0063 NR:ns ## KEGG: BDP_0063 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 74 349 73 347 349 308 64.0 3e-82 MNFGKHVKRKALYCCSVSVVGLLIACLIGFAMGVGLVDVHLEEEAHAAASSGTSSETSST SGALKQNSASQSQTQAVSSPTQVALDGISAVEGSATITTQGFTLSADSQAAVQSQIATFE ADGYTASFVLADITTGRTIAYNADVQIYSASSAKAPYLISLFSTGTVDLNSVAQSADAQS ATVHQKVDAVLRNSDNASYDWLYKTYGLDCFNTWAEQAGAASRMGDRGGYLFTSARDMAK LWTAGYGFLFAGQTAGVQNITPESLQWLSGDMTNSLNSCIHAALGDADTVYTKAGWINGE GDLYALNDAGLVMSQSGTYVLAVLTNACGRNDLLTSLIGTLDAVHSGDMRG >gi|148337405|gb|DS264454.1| GENE 163 162000 - 163034 967 344 aa, chain + ## HITS:1 COG:ML2278 KEGG:ns NR:ns ## COG: ML2278 COG0501 # Protein_GI_number: 15828221 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Mycobacterium leprae # 16 273 32 283 287 248 52.0 8e-66 MWGVIMLIWWATGASQSTLGYYILIGLGSTFVSYWFSDKLAIASMHARQVSEQEAPVLYK IVRELSAKAGKPMPRIYIAPTMSPNAFATGRNERHAAVCCTQGILQTLNEREIRGVLGHE LMHVYNHDILTSAIASAMATVISYLGYSLMYFGGGRSRDDRDDSASGGLGLLGVLLSAIL APIAASLIQMAISRTREYDADEDGSKLTEDPEALASALSKISGGAAAMPMEKTAGTQSVA AMMIASPFSAEGFSKLFSTHPPTSDRIARLMQMGQEMRQQGVQSGYLAGGYATSGVAAAD IRQGGRSAMAGAGGPQFGTQYGSAHDSGGSAGRYSRDYSQRPRG >gi|148337405|gb|DS264454.1| GENE 164 163332 - 163664 186 110 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486413|ref|ZP_02027820.1| ## NR: gi|154486413|ref|ZP_02027820.1| hypothetical protein BIFADO_00227 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00227 [Bifidobacterium adolescentis L2-32] # 1 110 1 110 110 149 100.0 5e-35 MQPQDGGVERDVCDKLLMLCDMFGVTLDDLVMGDVCASAGRGGAGRVGCVDAGRMDLAAD TAGVAASDGVVDSAVGAVPGVIGFAASQVAGVSDSAESDTRGGRWVGWSP >gi|148337405|gb|DS264454.1| GENE 165 163643 - 164629 900 328 aa, chain + ## HITS:1 COG:ECs2077 KEGG:ns NR:ns ## COG: ECs2077 COG0697 # Protein_GI_number: 15831331 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Escherichia coli O157:H7 # 35 325 2 289 293 192 40.0 7e-49 MGRLEPVNTNQKSPSDSGANHPTGNSCNPLLGHATSHAATLIGLFAIVLWGFMAGLVRLV SESFGATLGSALIYTVGGVMLFIVRRPKPIREAPCKYLIAGGLMFIAYEASISLSIGLAT TNAQSVEVSLVNYLWPTLLVLMTAAVSHKRGAVAKAIPGAVIATIGVAMAVGGESLDMQE AVHNIASNPLPYVLAFVGAFIWAIYATFTPSLSGGYDGTTIFFCCVAVVLWTIHFVSGDG LPDTAPGIGGYAALIACAASISGGYACWGYGMLHGSMETLAIGSYATPLFSTASSTLLLG VALGMPFWIGVVLVVAGSLINVWFARCP >gi|148337405|gb|DS264454.1| GENE 166 164764 - 164934 76 56 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486415|ref|ZP_02027822.1| ## NR: gi|154486415|ref|ZP_02027822.1| hypothetical protein BIFADO_00229 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00229 [Bifidobacterium adolescentis L2-32] # 1 56 20 75 75 111 100.0 1e-23 MAQRYVREVTGQDNALRLHASLGFCRLVDGDEFVALGFQVVDDGGQRVHVYQPKPI >gi|148337405|gb|DS264454.1| GENE 167 164969 - 167290 2998 773 aa, chain - ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 772 1 709 709 258 27.0 4e-68 MKMIWGIFKRDMCHATRNVIAVIVSMGLVVVPALYAWFNIAASWDPYGNTKALKVAVANN DKGYKSDLIPVRVNVGETIISTLHANDQLDWQFVKSDKAIDGVKSGEYYAAIVIPKGFSA DMMTLFSPDIKHAQLKYYLNEKINPIAPHITDQGATTVVNTIDKTFAKTIAQVGLDLASS ILHYSQSPQMAEYMRNLNGNLTTMADTLSGASQQVTSYSQLLGSANDIVDSTGKLLASAT KAGKQAQNALKQGKSGATSLTSAGANVTSSVNTALDQVSGAFDQVAAKVNKAFDAIGKGS DTAASQLTALSEQVSSGESLYDTYITSLNHMRESVEQLPDSDSAKQALLEAIDREITLLE AAKGDSQKLAQQLKDASTQVTQDTAAAESSRKEILNRITSAKQSISNVRDDYATNVKPKI DALASTVSTLISQTDSMITQLSGTADGLDDVTGDVGTNVTSIRSTLGAIAKKLDSSAATV KELITKLETGGNAGDGNSDGGDGDNDADSGESDELRALATANASTLSTLISAPVALHRVS VYPIANYGSAMAPFYTILSIWVGAIILCAMLKVTISDREKAHVLGLGDTLPRIAGPSGPG NASRWGLRLDHEYFGRYAIFALLALLQGTLVCLGDTYFLGVQANHALQFLAVGWLAALVF SNIVYTLTVSFGDIGKAVAVVLLVMQVAGSGGTFPIETLPKFFQMLYPFLPFPHAIDAMY AAMAGSYGNEYLLDMVYLALFLIPSLLLGLVLRKPVIRLNNWVSRNLESTKVM >gi|148337405|gb|DS264454.1| GENE 168 167287 - 169998 3256 903 aa, chain - ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 692 1 676 709 296 30.0 2e-79 MHQVFAIFLRDVKRILKNPVALVVTLGVAIIPSLYAWCNILANWDPYANTGNIQVAVANE DKGTTSTLVGHLDAGQQTVNQLKKNHQLGWRFVPKQQAIEGVESGKYYAAIVLPEDFSSR LIGTVTGKGDRPSITYYINEKLNAIAPKITDTGATTIDEQINTTFVSSVADAVAKEVKEA AGETTGSVKSAQSDVVNDLTDTINQLETVQQQLRDTRSTLDKALTTIDSAKQSNIALASE ITNSLDTVGKASDLLSETRTQTERFSNTLVGALDNGSTQLSGLQVNVSNATGTVLSGLNT TQDALDQVSSTMHHVNTTTGNVLDDVEKALQASQLDPNSQTYKDLSAQLAEARKQLTFQQ QRIDAFDQDTTAAINAGKNTANGFNDDVTTLAKNGTASMASARTTITGTVMPNLNTGLDT LSLANGSLSGTLTTLQSTLEQGNGLLDQLSRTVTQTNTTIAGTQTQLANLAKQLNTTRTD VAALSSSAMFQQLSQALGLDASEVGSFVGEPVHLDEQVLYPVKNYGSAVTPFYTNLALWV GGFVLVAIYKLEVDRDEKIRMYTPRQGYMGRWLLFVTVGFLQAIIATIGDLALGIQCEHP FLFILAGIFASFVYVNIIYALAVAFRHIGKAVAVILVIIQIPGAAGLYPIEMMPEFFRRL KPFLPFTYGINAMRGPIGGMYANHYWIDMLSLFWYLPVALFIGLVVRKLALNLNRLFDNR LADTDLMITEHNEGTVEPLRLTETAQQIAEEFPELARRRAIHFFRLYPRLVRWGFLALAV LPFVFLLLLFITRMKLAMLLGWIISIIAIDTYLIVVEYLRERYANYLGEEAMSAEEFRSA ILHENLLFRPGMHYKPMHAVRTRLYEVAHGGLAGHATEHAAEYAAGNTDGNAGRSLREEG NEQ >gi|148337405|gb|DS264454.1| GENE 169 170220 - 171374 1227 384 aa, chain + ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 30 383 1 342 345 396 57.0 1e-110 MERTVGKTERKDGECCHMTSGIGLGDNGGMTIATPERYAQMLDAARRGGYAYPAINVTST QTLNAALQGFAEAESDGIIQVSVGGAAYFSGQRVNDRVTGSLAFAAFAHEVAAKYPNITI ALHTDHCAKQYLDEWVRLLLDHEVEQVKHGQEPTFQSHMWDGSTVPLDENLDIAEELLDK SQAAHTVLEIEIGAVGGEEDGHSAEINDKLYSTPAQGITVAQRLGLGERGRYMAAFTFGN VHGAYKPGVVKLRPELLDEIQTTVALAIKAGEMPDPAHSLDVAPGKPFALVFHGGSGSAP EEIAQAVSYGVVKMNIDTDTQYAFSRAVAGHMFSNYDSVLKIDGEVGNKKLYDPRSWGRE AESAMAARVVEACKQLGSAGRALN >gi|148337405|gb|DS264454.1| GENE 170 171560 - 172846 1791 428 aa, chain + ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 576 63.0 1e-164 MPGIVLIGAQWGDEGKGKATDLIGTKVDYVARFNGGNNAGHTVVVGDESYALHLLPSGII SPNTTPVIGNGVVVDPEVLFQEIDGLESRGVDCSRLLVSESAHIIAPYHRVLDKVTERFL GKHKIGTTGRGIGPAYADKINRVGIRVHDLFNAEHLHDKVEASLHQKNQMLVKLYNRRPI DVDETTDELLKLGERLKPYVANTSLALNKALDEGKTVLFEGGQATMLDVDHGTYPFVTSS NPTAGGACTGTGVGPTKITRVIGVSKAYVTRVGEGPFPTELFGEEGEWLRAQGHEYGVTT GRPRRCGWFDAVVNRYAAQVNGLTDIVLTKLDVLTGLKEIPLCVAYDVNGERRDDMPTDQ AEFAAAKPIYESMPGWDEDISQVHDFNDLPKTCQDYVKRLEELSGCRISVIGTGPQRDHI IQINSLID >gi|148337405|gb|DS264454.1| GENE 171 173023 - 174621 1833 532 aa, chain + ## HITS:1 COG:L113400 KEGG:ns NR:ns ## COG: L113400 COG0038 # Protein_GI_number: 15673646 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Lactococcus lactis # 35 527 21 508 512 309 38.0 1e-83 MTAMPPNDRFDRFDRFSKLVPRFDHLKWKMAAAGILVGLISGFLVVLYRLGIEYGTDTAR WIYARIRETPWLVAPWAVAAIAAALAIAWMVKKEPMAGGSGIPQTNGVVICGLKMRWQTI LPVRFIGGLLGSLFGLSLGREGPSIQIGASGAQFLSHRLRGKKREDVQEHYLVTAGAAAG LSAAFSAPLSGMMFALEGVHRSFSPAILMGATAASLTADFVSKYCFGLRPVLDFGTIGQL PLGEYGWLIPLGLVAGLVGSLMNRSLLGFQTLYGKLPAWSRPLIAIALALPIGIWLPDVL GGGSNLIAMAEHARVGLGMLCVLFVAKVLFTSTSFGSGAPGGIFMPILAVGSLAGGICGE TLHQFGNLPSDSVAIFSVCVMTGTLAASVKTPITSILLAVEMSGTLTHMLPVAAVAFIAL LVSDLLRTKPIYGELLERYMRAQGGTTAIANRIDNGIMELPVEMGATADGKLMRDVRWPY GCLVIGLRRGERQIVPHGDTRLRAGDYLVVLFSGEDESDARHAMRRLCDVSV >gi|148337405|gb|DS264454.1| GENE 172 174837 - 175895 1207 352 aa, chain + ## HITS:1 COG:lin2188 KEGG:ns NR:ns ## COG: lin2188 COG0239 # Protein_GI_number: 16801253 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Listeria innocua # 68 198 1 124 129 62 29.0 1e-09 MESQEQRAADSPNAGDEPNPATQSIDVAEVARADVRPSGAAASKHPPQIPLAPMKRMQAR FNPLADGLMYLVVFVGGFVGVGFRRATDLLLPSVNGSPFVVGTFVSNMLACFLFAMLTEY MATASWLRRRVRQVVSRGVGLGLLGGLSTMSGVMLETMEGMREQRFGSALGYLAGSFAGG LIAAAVGVALMQALLARGTRKRVRNAIADASTASVSSMSDSDAYGIVQDVQMTDTAVSAT QSVTQTVPMADSGESDVPAAQNVQNNVPDAQGVRHVKVADAAHSAAQAALEAAQAAQQAA QVAQQVAQTGQVPKIESQPQSSQPVAPLPSFEPKPVTAEIPLVADPTTGEVR >gi|148337405|gb|DS264454.1| GENE 173 175895 - 176281 542 128 aa, chain + ## HITS:1 COG:no KEGG:BL0547 NR:ns ## KEGG: BL0547 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 1 128 241 371 371 189 78.0 2e-47 MTWMICLFGGIGAMARYVLDVSIQRSWNRDGNHSFPLATLVINGVASLCAGIAMMSYYAQ SVDMGTVMTFVVGFLGGFSTFSSAINEVLSLIRKRRFAMALGYGVATVAVPLACVALGFG IAMLGGHA >gi|148337405|gb|DS264454.1| GENE 174 176415 - 177857 1657 480 aa, chain + ## HITS:1 COG:SP0750 KEGG:ns NR:ns ## COG: SP0750 COG0559 # Protein_GI_number: 15900645 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Streptococcus pneumoniae TIGR4 # 194 475 3 283 289 129 31.0 1e-29 MTAVTYLTRHRRPGIVILCSIVAVLSMLFVLPPAIASAADSGAQAVDECNPTASNGCVNG ILQDADKKPIADVTITLSGKATAETKTAADGKWAFSVADDGDYTVTIDASVAKEHGLKAS SATVTIRKASFDKQRGVVRFDQAGDSAGSGTSGTSGSSGSANGTKGATGTSGSTAATQSP VKKDGSNVGKRIWQQLYSGIIFGLMLGLMSVGMNLVYGTTGLQSFSHGEQVTLGGLMAYV GTQMLHMPLIASAIFAIVIGALTGFIQNEIVWGPLRRRHVGTMQQMIVTIGLSMALQYTF QFFFGGDIKGIVKSVPDSFQLGPITTDMPTLVSALIAICVIVGVTLFLYKTRLGRATRAV SDNAALAAASGINVDQVVRVVWILSCAMAALSGVLLGVYLNGISWNTGATLILLMFAAVT LGGLGTANGALIGSLVIGIVADMSSLVIPNDMRYASALAILIIVLLVRPQGIFGKQQRVG >gi|148337405|gb|DS264454.1| GENE 175 177861 - 178844 1172 327 aa, chain + ## HITS:1 COG:sll0146 KEGG:ns NR:ns ## COG: sll0146 COG4177 # Protein_GI_number: 16331150 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Synechocystis # 18 325 12 370 372 129 29.0 6e-30 MDIMTIISNAAGELIAPTTAAYVLAAIGLNIHFGMTGLMNMGQAGFMLLGAYGFAITQSM GCNLFASVCAALALAVIYALLLGIPTLKLGPDYLAMVTLAAAEIIRIIGRSTAMTNFTGG SAGISPQDFTEKFESLSPLPDGSTTFLLWTYSNNIANSWWLRIVAWVLVVIAALLCWRWF HSPWGRMLKGIREDENAIRSLGKPVTRYKMESLILGGLFGAIAGIIFVLPRSVQPDSLGR TVTFYVWTILLLGGAATILGPVLGSCVLWVLLTFVKEVMRNTVPETLISSNQIEALGWVI VGVALMCLVIFRPQGLLGDRKELAFHA >gi|148337405|gb|DS264454.1| GENE 176 178837 - 179868 241 343 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 82 316 5 230 245 97 25 1e-18 MPEPTNSPTTGVQPATQPATGVQPVSGVQPGVPFQDLTKWATKAPEGETLISTAYRDKVT DDLKFVENKPGVHKPDPILVADNVTRKFGGMTAVDVSHFEIERHGITALIGPNGAGKTTF FNLMTGFDTPNTGTWQFDGKDMAHVQPEKVARMGMVRTFQLTKVMSRLTVLDNMLLGAPV QPGEGMFRALFPGMWRKQEQANIEKAEALLERFLLIKKKDDYAGALSGGQRKLLEMARAL MSDPKLVMLDEPMAGVNPALKQSLLDHIMALREEGTTVLFVEHDINMVRHIADWVTVMAE GKIVAEGQPKSVMNDPAVIDAYLGAHANVDLGDDSVLEDLKEA >gi|148337405|gb|DS264454.1| GENE 177 179870 - 180679 185 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 27 251 8 251 563 75 25 4e-12 MSDIASVADEPLTRAQIHMGEPEGEPLLDAVDLVAGYIPGVNILNGASLTLHEGEIVGII GPNGAGKSTLLKSLFGLVHIHSGKLLLKGEDITNLRADKLVSRGVGFVPQTENVFPSLTI AENLHMGAFQAPKLFNERFDYVCSIFPKLGQRKNQLAGQLSGGERQMVAMARALMMKPSV LLLDEPSAGLSPMLQDETFIRVRQVNKAGVSVVIVEQNARRCLQICDRGYVLDQGRNAYS GKGRDLMNDPKVVSLYLGNLEEEVQEEGR >gi|148337405|gb|DS264454.1| GENE 178 181047 - 182342 1595 431 aa, chain + ## HITS:1 COG:slr0559 KEGG:ns NR:ns ## COG: slr0559 COG0683 # Protein_GI_number: 16331678 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Synechocystis # 14 391 22 416 454 84 25.0 6e-16 MKKINMKGMRKLSITATAMVAAAVMALAGCGSSSSSSSSSSGSDSTSGAKATKFVLGGLW PETGSLAYLAPPELAAEKLAVKDINDAGGVLGNKITTVDADTSDADHADQNTSAAQSVLS KNPSFIIGPASSSVVKNTYKSITSQNVPMLSMGATSASFSGLSDYFFRTVAPDTVQGAVM GNLIAQDGVQKLAIAVFNDEYGTGLRDTIAKTASEAGVNIVYGEKDTFDPTETNFSSIAT AIKASNPDATLVIAFDQTKPLLKALASAGVNTKKLYFVDGNTSDYSSELDAGLLEGSKGT IPGVNPSDDFVKRLESTGVDLKNTTTYGAETYDGIILAALAAQKGGSADGKTIQANMAAV SGSTKGKECDSYKACLALLKDGKEIQYKGQTSIGAFNDAHDPSSASIGVYKYDADNKPVF DHSQEGSVPKA >gi|148337405|gb|DS264454.1| GENE 179 182725 - 183810 1272 361 aa, chain + ## HITS:1 COG:SPy1817 KEGG:ns NR:ns ## COG: SPy1817 COG1609 # Protein_GI_number: 15675647 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 4 318 5 293 321 172 35.0 7e-43 MVGMRDVAKEAGVSLSTVSLVVNKTGYVSDDMRARVKAAMKELNYVPNELARNLYKNRTN LVGVIVPTIRHPFFATLTAHLQRELAAQGLRTMLCSTADAENGEVEYVDMLRRHMMDGII VCSHTTHPNDYWTSIHRPIVAFDRVLGGGIASIGSDHEQGGRLMAHMLVNTGAHHVVMIG GPRDQFFDLAARNGDSPDDFDLHKTTFPAVRYYLTLEQELKAAGVRYEYVEAGNVEDFQG YKNAVNAVLNSMPVDGVDAVVSSDIGAALCVREAMRRHISIPRDLQIIAYDGTYLTDLAG MKMTAVAQNFDKIAQVAVGNIVRAIAKEGDAKADTTSATGRKPYEPDVLIPVTRKLGDTT R >gi|148337405|gb|DS264454.1| GENE 180 183871 - 184824 1221 317 aa, chain - ## HITS:1 COG:MT0833 KEGG:ns NR:ns ## COG: MT0833 COG0115 # Protein_GI_number: 15840224 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Mycobacterium tuberculosis CDC1551 # 30 284 16 274 295 147 35.0 3e-35 MSSIVLAVGNGKTLFGGAGVAPDADLVRFVDPESPIINAFDLCALRGDGIFEATTVWKGF PVSLENHLKRLANSARLVDMPEPNIPALTRAVQLVIDQYDDPEPGPMLRIIVSRGLDPDT GVGKAADRTPTVYIFLDAKGTLHSLEPITMASMTRGYPSDITARAPWLLNGAKTLSYAFN CAVHRECARRGVGDAILFTEDGYTMECPNSSIVARYGDTFVTPDPRIGILNGTSQREMFA WALEEGKKAEYRKLPIAELREADSLYMTHGGWSIPISAIDGRALAVDAAEIQAINDAIHS GRTHEDALKIGPTGDYE >gi|148337405|gb|DS264454.1| GENE 181 185129 - 185941 879 270 aa, chain + ## HITS:1 COG:Cgl2492 KEGG:ns NR:ns ## COG: Cgl2492 COG4336 # Protein_GI_number: 19553742 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 18 270 7 263 264 322 61.0 7e-88 MVDGMSDMGTTELGAASTPEQARAAFRDGLVRPTCGIAQGYAQANLMILPKEQAFDFLLF AQRNPKPCPLLEVMEPGVTALVTAPGADIRTDVPLYRVWKRGELVAEVPDIREYWRSDLV TFVIGCSFTFEFPLMEAGVPVRHITAGRNVPMYDTSIECRSAGAFHSTMVVSMRGIPSTQ VADACRISGYYPSVHGAPVCVGDPSAIGIDDIMHPDYGDAPVLEPGDVPVFWACGVTPQA AVMASKPEFAITHAPGHMFITSKRDLEYMV >gi|148337405|gb|DS264454.1| GENE 182 186069 - 186275 177 68 aa, chain + ## HITS:1 COG:AGl1871 KEGG:ns NR:ns ## COG: AGl1871 COG1540 # Protein_GI_number: 15891052 # Func_class: R General function prediction only # Function: Uncharacterized proteins, homologs of lactam utilization protein B # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 15 68 4 57 255 77 64.0 5e-15 MAVQETDGRQTAMRIDMNSDMGESFGRWTLGDDEALLDVVSSANVACGFHAGDPSVMLRT LSYAASRG >gi|148337405|gb|DS264454.1| GENE 183 186275 - 186493 248 72 aa, chain + ## HITS:1 COG:no KEGG:BDP_0105 NR:ns ## KEGG: BDP_0105 # Name: not_defined # Def: LamB/YcsF family protein # Organism: B.dentium # Pathway: not_defined # 2 40 60 98 291 65 82.0 8e-10 MVGAHVAYRDLAGFGRRYVDESPDELKADVMYQIVEYGGLDGVHMTNVATVDGLEPDRYF KQVGQLTDCARS >gi|148337405|gb|DS264454.1| GENE 184 186747 - 188261 2165 504 aa, chain + ## HITS:1 COG:AGpT251 KEGG:ns NR:ns ## COG: AGpT251 COG0366 # Protein_GI_number: 16119953 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 22 455 1 433 464 494 55.0 1e-139 MKNKVQLITYADRLGDGTIKSMTDILRTRFDGVYDGVHILPFFTPFDGADAGFDPIDHTK VDERLGSWDDVAELSKTHDIMVDAIVNHMSWESKQFQDVLAKGEESEYYPMFLTMSSVFP NGAAEEDLAGIYRPRPGLPFTHYKFAGKTRLVWVSFTPQQVDIDTDSDKGWEYLMSIFDQ MAASHVSYIRLDAVGYGAKEAGTSCFMTPKTFKLISRLREEGVKRGLEILIEVHSYYKKQ VEIASKVDRVYDFALPPLLLHALSTGHVEPVAHWTDIRPNNAVTVLDTHDGIGVIDIGSD QLDRSLKGLVPDEDVDNLVNTIHANTHGESQAATGAAASNLDLYQVNSTYYSALGCNDQH YIAARAVQFFLPGVPQVYYVGALAGRNDMELLRKTNNGRDINRHYYSTAEIDENLKRPVV KALNALAKFRNELDAFDGTFSYTTDDDTSISFTWRGETSQATLTFEPKRGLGVDNTTPVA MLEWEDSAGDHRSDDLIANPPVVA >gi|148337405|gb|DS264454.1| GENE 185 188553 - 190145 1351 530 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 101 524 1 411 418 60 23.0 8e-09 MTEDNQNNEFKPQPLPGQVFIRPGIDDRPDYEKTLTPEAKAAMRRLSVQQHPRIPEASNE RPETQAARIASEGGAPLTAAAHLDVAVPNLESSFLDLRDPMTAPDGTRPTAMQANRLVAG FALGSMLLSAPMAAFNTVLIPQTVSRLSGINRVTDLAMLVIAGAIMTFLLNACIAVGSDH SYCRFGRRTPWIVSGSVLAAICMAILSACDFLPWAVFFWLATQAAYAMAAIPFAAAFGER VPDKFRDRADSWHGKGLALGQLVGVAVAVALTPHAGGEGWDGTTGFAMLVFAGWLVVAAV VTLLVLPFEGASSYLPRRDVEKGDFFSQYRPPQNAPKFSVAFAARMFAVAATAGIAVYQW YLAPNIVGNTDEAGLFGIAGAGSVVVVMAICTFVGALIAALLLGRIVSLFGDLRIPAVAS AVLFMVAALLPLLMDDGFLAVALYALLAGFAYVVFDGASQSLDLAMLPDVRSVGRSLAAY SLANTFGTILGVATCAAVIVATGATVLIFAVATVSMLLAGLLTLRLKSQQ >gi|148337405|gb|DS264454.1| GENE 186 190163 - 190543 81 126 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCAMPAGFKRFSLRLPCGLQQKWPRIMQGHQRVCYARLKPCLRWRGIEAAMLESVRQRKR NNNSCGQQYVCDHSVHRGEPPFAKSFPRAGFPLELSRKHRRVHLPYPLKVHYMDAPFRFI FQSLAI >gi|148337405|gb|DS264454.1| GENE 187 190624 - 191973 1990 449 aa, chain + ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 8 447 16 459 462 375 50.0 1e-104 MSTVEAAAGKAQAMVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPKVFFGDTTNPT VALLASLLTFAIAFIARPLGSLVFGHFGDRMGRKTTLVVSLLTMGIATFLIGCLPTYNQW GVAAVAVLCLCRFVQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIGFFLSNGT YFLLETFNDNDAMLAWGWRVPFLLSSILVIVGLVVRVQMEETPIFRMAQEQKKVVKSPLA EVFKKSWKEVIQATFLVAVTYTLFYTLATWSLAWGTKTVEQGGGNLGFTNQEYLLMLMIA VCVFAAFIVISCVNADKFGRKRVIIISSCCLIAFALLFPFLLDPAVVGQRNFATNLLFLC IGFALMGTAFGPIGAFLPELFDANVRYSGSGIGYNLAAIVGAAFVPTIATWLSHHWGVHS VGLYLGVMALCCLIAVLSCKETKNVDFTK >gi|148337405|gb|DS264454.1| GENE 188 192152 - 192358 68 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGVALGTVTEDGHLLAIEHGQIGVLFVPDSCCHNWRSFIVFLRFGTCFFRTNSLFSILFS VVITASDS >gi|148337405|gb|DS264454.1| GENE 189 192260 - 193312 1510 350 aa, chain + ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 328 337 355 55.0 9e-98 MAATIWYEKDADLSVFDGKKVAILGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVEYAKE QGLEVKPVAEAVAEADVVMILLPDQYQAAVYKKDVEPNLKPGAALAFAHGFNIHYGYIKP SEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPDGKTWPLCLAYAKALGALRAGA IKTTFTEETETDLFGEQDVLMGGINHLCDMGFDVLTEAGYQPEIAYFEVFHELKMLVDLA NEGGLNKARWSCSDTAQYGDYTSTVITEETKKRMQYQLKRIQDGSFAKEFMDDQAAGAPK FKKLQEEYSHPHLETVGPKLRAMFSWNNQVDADADMAESFNGKIARTQVQ >gi|148337405|gb|DS264454.1| GENE 190 193509 - 194549 1377 346 aa, chain - ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 328 337 369 55.0 1e-102 MAAQIWYENDGDLSVLEGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVEHAKE QGLEVKSVPEAAAEADIIMILAPDQYQRTIWANDIEPNIKPGAAVAFAHGFNIHYGYIKP TEDHPVFMVAPKGPGHIVRREYANGRGVPVVVAVEQDPRGDAWDITLAYAKALGALRAGA IKTTFTEETETDLFGEQNVLMGGVNKLVEMGFEVLTDAGYQPEIAYFEVCHELKMLVDLM NEGGLNKARWSCSDTAQYGDYTNTVINEDCRKRMQYHLSRIQDGSFAKEFIDDQDAGAPK FKQLQEEYGNVRIESVGPKLRAMFSWNNGKDDDADMATFTGKIARG >gi|148337405|gb|DS264454.1| GENE 191 194823 - 196670 1962 615 aa, chain + ## HITS:1 COG:no KEGG:BAD_0083 NR:ns ## KEGG: BAD_0083 # Name: not_defined # Def: sialic acid-specific 9-O-acetylesterase # Organism: B.adolescentis # Pathway: not_defined # 1 615 9 624 624 1113 87.0 0 MVAVTGPAPGSELTAEADEVEERSSAGVLHVAAIFASHMVLQRNKPNAVFGALDADCAGM EVVAQIRDFDGSMVAQAHAYASKDLKDGLSPWRVMLPAQPEGGPYTLRVTAGNDFLEFED VLIGEVWLAGGQSNMELELRNSENAEAALENCADPLLRFYNVPKTGVINRNAENAASWQE SSPENSGVMSAVAYYFAHKLRSELDPDLPIGIVDCYIGGTSITCWMSEDALNSSEAGRGY LTRYERAIAGKTQEQFKLETDEWQTRFDAWNANIAAAKEADPDVTWDTLNEQCGTCPWPP PLTPTSQWRPCGPFHAMLERIMPYSLAGFLWYQGEEDEQYCGFYRELLGMMIGEWRALWS ENLPFLIVQLPQWIDGKTAADGDDPMRWPVLREAQWDAAQSIDNVYAICTIDCGEYDNIH PLDKRTPGERLANCALRQIYGMDRVPVHGPTVLGFRCDPNGRVRLFFRYAHGLHFEGTTT GGGDDDFDGQLPTLVRVPERSGFELAGSDGMFHPATAAIFVDCDIDDLVNSRVNVVDCNA TEFGIPINSRSIGTITLATPDVPEPVAMRYAWRSWGPAPLFNDDGLPAQPFRLDLTDHTS PVESAEPVTPDGTAD >gi|148337405|gb|DS264454.1| GENE 192 196808 - 198337 2125 509 aa, chain - ## HITS:1 COG:STM0150 KEGG:ns NR:ns ## COG: STM0150 COG1113 # Protein_GI_number: 16763540 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Salmonella typhimurium LT2 # 22 478 11 440 457 392 48.0 1e-108 MSDVTAAKKPRGTDDVPVPPTLRKSLKNRHIQLIALGGAIGTGLFYGSSESIQLAGPSIL LAYLVGGLAIFMIVRALSEMAVEDPKAGAFSYYATRYWSRRAGFISGWNYWFNYVLVAMV ELAVVGSFVNYWFPNIPKWVSAAVFLVAIAALNLMGVNKFGEFEFWFAIIKIVAVLAMIL GGLYVVIANVPTASGIRASFANWFTVDGGFLPHGLMTRNADGTWTGLLMALVVVMFSFGG TELIGITAGETENPRTTIPKATNGIIWRILVFYICALGVIMAVIPWSKIDGDSSPFVQIF DSVGVHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLAKQGNAPAYLGKLSKKGVPVGG VITSAIIIAIAVVVVFVWPEFAFNYLMSIATIAAAINWIMIMITEIKFRRMVAAGDGPAE LKGLKGKEALDKIAFKLPFANVTPYVVIAFMLLVVVLMCFSASYRIAVIAGVIWLAVLFA AAQLALGKSGSERGEDAAVIVDAAAATAE >gi|148337405|gb|DS264454.1| GENE 193 198336 - 198551 58 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEISSSLFPCDCALRSLLALRAVARLHVLVLLAFLRFALCEGTFPIVAGSGGQSVGLFVP ECLVCLTGCLV >gi|148337405|gb|DS264454.1| GENE 194 198611 - 201679 3708 1022 aa, chain + ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 275 1022 421 1136 1136 333 31.0 1e-90 MCGLARLSKLHGVQWNEGLRTEVDMAFVKDMLRMWAHSWKRFISIAMITLLGVAVLTGIY AGCRDAFRSTDRFFDAQGLHDVQVLSTAGLSNGDIAALRKVNGVAKVQAERSQEVTFDLD GRKSATMQEIGTNGIDQPYLQEGRMPKKAGEIAVTRKFIRDSGKRIGSRLTVAPELASSD TSDTSDTNGADGTNETNGTDEAPSFPTKLTIVGVVLDPQNLSNPDGYSAMTSFRSTATTD YTFFAPSDGVTGTLCTSATLLVKGAAAESTFDESYENTVKQVTDRIDGTVKTDRQKARRQ ELLDAGNRKIADARAEADKKFADAQSQIDANRQQFNQQVDQIVSMQAGAAAAGAAANGAN AGAAAAAGATTPQLDETTRETMRETIIAASPELTQAKQQLDQAQSQLNEQKASTEQTLKT KENELKTSIPQVRWYVQDRQSLGGFSALKSDLDSIQSLGNAFPIVFLLVAVMMSLTAMAR MVEEDRSLIGTYVGLGYGRLAVASRYLLFALLACLIGGGLGLIAGFLGIPAFLLVVLQGM YVMPGLRLEYDWLYGSLGIALFVVGVLAATIYACVQEMRQTPASLLRPKAPRAGSRILLE RIRPVWNRIGFLGKVTARNIFRFKSRLIMTVGGVAGCTALIVCGLAINDTVADLGIKQYR DIYQYDLMVVSDDSDASAMRTKVASDGRVTSSLDVRIESGDLAISGGGDGDSGKAGSSGS ESIQLVAVPEKHLSDLGEMVTLQPVSSGILGTSGVGKTGSLKLDDDGVIVAQSAASALGV KAGSKVRLTNGDGVQATAKVGAVNRNLIGSDVYVSETYYAKLFDSKDAKNTKNSKSSEDS EALTWNAMLAKLSGSDTSQTDYAESLEEDSSVMKAVSCAHMADSFKFDLMGAVVALIVAL AGGLALVVLFTLANTNVSERVREMATLKVLGFFDREVHHYVNREMMILTVMGVILGLPLG RLVGGMLTMALNMPSLYFEVEVKPLSYVIAAVATMAFALLVQLFVNPVLDRIDPISSLKS VE >gi|148337405|gb|DS264454.1| GENE 195 201698 - 203164 1677 488 aa, chain - ## HITS:1 COG:SA0868_1 KEGG:ns NR:ns ## COG: SA0868_1 COG0475 # Protein_GI_number: 15926598 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Staphylococcus aureus N315 # 4 391 2 395 399 108 23.0 2e-23 MTQELVSLTIIMAVAAVSPIVAQLIPGKFIPQTVLLLAAGTALGPYGLGVIEVNDAVKLL NELGMAFLFLLAGYEIDPKRLAGHQGKVGLLTWGITLGLAWLVVTFLPFFTKQGINGVAT VIALTTTALGTLMPILKERNLEGTPIGDAIISYGTWGELGPILAMAILLSTRTGWQTMLV LGAFLAICLLCAMLPTKALKTGHRLYRFLTENANTSSQTLMRLTTFLLIFLVTISALFEL DAVLGAFAAGFILRYIIPDGSKSLEMKLEGVGYGFLIPVFFVVSGAAINVRAVAGRPALL VAFIVMLMLIRAVPVYVALSLDKRKNPLSSHHRVTVALYCTTALPIIVAVTSLAVKVGTM QSDTASTLVAAGAITVFLMPLLGSITYQVADIHPVTAVREIAHTPSDWRTIVREHAQVRA LLHHQDRLKRMAETLESLEKQEGLNGLDSRRAELVERARLEIDRQLKELGLDPQLTTQLP HNYRYPKN >gi|148337405|gb|DS264454.1| GENE 196 203401 - 204492 767 363 aa, chain + ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 167 347 70 249 279 166 45.0 8e-41 MAGILRGGTCGGSRSSESQDMRTYVPPTFAEATDVSEEIRERRADVGRSIALRVLAAVLI FSAIGIGLFPKVLQYQSAQKLASTSARSEQSVAGWPYPQADEAFAAAGAYNKRLAKSGQP VIGEAEDPLAELYNNNQSDSGDGSGSSSTGAGATGDGNKDSASSKDAEYQRLLDTGDGVM GSIRIPKISVDLPIYHGTSEQTLASGAGHLYGSSLPVGGKDTHAVITGHRGLVEASMFTR LDEMRVGDYFYIDVMGHTLGYKVDRITEINPDDTSKLKIVPGEDRVTLMTCTPYGVNTHR LLVSALRSAIPEEIPAEDDAAKDVRVIAGVVSAATLLVGLLLVWLLRCPWHVRRHAAWWP KRN >gi|148337405|gb|DS264454.1| GENE 197 205042 - 207468 1756 808 aa, chain + ## HITS:1 COG:no KEGG:BDP_0143 NR:ns ## KEGG: BDP_0143 # Name: not_defined # Def: fimbriae protein with LPXTG motif and von Willebrand factor typeA domain # Organism: B.dentium # Pathway: not_defined # 65 807 539 1255 1256 615 53.0 1e-174 MVGEEQPSEQEQPSDQEAYQQVEQETEQETKEETEQWVEQEVEQQSEQPDEQPVTLSAQP IARANRAQSVAQNETGSQLGAPEKHKRIKKNDNGSYTVNVDVKGAVNSTTVTTTQPIDFT LVLDVSGSMDDPMSKTDRTRRLDALKEAVKAFLDEAANTNTEAGSELVHVGLVKFAGDKT DKIGDDMYRSGGYTYNYSQIVSNLTADMNGLKNKVSKLKAAGATRADNGFNRAVKVMGSA SARTDAKKVVIFFADGSPTSSSGFEGKVANKAVEAAKELKDGGAAVYSIGIFASANPSSL SSNENQFMHAVSSNFPKATKYNQLGEGNIEAGYYKSATNASELNTIFDEIEKSETTTSAY TNVTMEDTLSDYVDLADNNYRVVAKDASGKVVSLTNVDYTLTYDASTKKFTVAFLKALAH NVTYTLEYNVKPTQKAYDEYAANLNAGKDGYDGVKGNANTDLPGNATSSNQPGFHTNDSA CLTYTADGKTHECRENPYPHPVIQVVHSTLHVDKQWSGNGQKPESITVDIKQGNDTYKTV TLKRDDSGKWSTDVIIPAGAQKTYTVTEVEPDSHLWKASYQHKVGDGNLVDGNAVTVPES TASQEATVIITNTLKQTMLTHAIGVQKELKGRDWKDSDEFTFKLKADDSNPDAPMPASCK NQSACTVTVKRDSSDDHVAYFGDITYDAGEAEYTYLVTENAGNASAMYYSQAEYRVVVSV MKDGTSGEWKAVVESVTQLKTDYGAAGSNWDETQPMLFTNQYISASSLPLTGRMGAERWW QIAAGGVGVLALLAVAAADQWRRKKRLS >gi|148337405|gb|DS264454.1| GENE 198 207565 - 209142 1368 525 aa, chain + ## HITS:1 COG:no KEGG:BAD_1467 NR:ns ## KEGG: BAD_1467 # Name: not_defined # Def: cell surface protein fimafimbrial subunit # Organism: B.adolescentis # Pathway: not_defined # 1 521 1 524 532 217 36.0 1e-54 MKMRKLFAGLAAAATLLSGMAIGVAAAQADDAPLLQVNHAQEGHTYTPYKFAMFENPGDG SVEVKTVDAWKGAVTTAADVADGSHNGIPTEYKDNPAAYVAMFTADQLRVFAKTLAGITP PAGPDGTGLTVTTEQANTSQAVNVNGEGWYLVKDTFTKAGETTVTSGTPAVVATTVNGLS NLRIAADTTTGQGNITTEGQFNAKNANPTDEPLKFARMNDVDVNGKSVKVGDTVDFTVAA DVPHAAAGWDAYPFTITDTASKGLRIAETSDFKVQFGDHTTVNPDLYTITQEGNAQSGTT TTIYFADATTLAGRTIVVSYQGTVTKDALDGLSGSVDNKATITTKDGTSGEGKTVLKTYG FQFTKIGKEGNEAKPLAGAKFVVKNAEGKFLKQAEDGAWSFVSDQNDAKTFITENDGLVK VAGLAAGTYTVVETQAPTGYAQNFRVTFNVKITDEGLITFEPDALRQVQPVNNTTANATA TVLNVKSVTQLPLTGAAGTVLFTVVALLVGGAGVAVAVKSRRRTY >gi|148337405|gb|DS264454.1| GENE 199 209031 - 209375 124 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLNDPPPRIVLPPLLYPVMKQVYIRLLTSSFSNIADRILLQPIGHTSMRAIMEYPQPPAL TFIVSESIHNSLTPNACAQYVRRRLLTATATPAPPTSSATTVNNTVPAAPVSGS >gi|148337405|gb|DS264454.1| GENE 200 209350 - 209787 497 145 aa, chain + ## HITS:1 COG:no KEGG:BDP_0145 NR:ns ## KEGG: BDP_0145 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 2 116 3 117 190 170 73.0 1e-41 MRGGGSFSMDELQMLRDLPAVANVSKDRITYSNAFKQVCVIRYLAGESPTKIFREAGLPP ELIGYKRIERSVARWKAAVLKSVSGSSDMSNGEIITELVNLYVHAVTRKEKLDGIAGIAN SDKANIGNAPHPLDRANVSGGVYIR >gi|148337405|gb|DS264454.1| GENE 201 210081 - 211619 1949 512 aa, chain + ## HITS:1 COG:SPy1654 KEGG:ns NR:ns ## COG: SPy1654 COG1113 # Protein_GI_number: 15675525 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Streptococcus pyogenes M1 GAS # 34 494 14 453 459 460 54.0 1e-129 MTFGNTKTGKTGTSTSEATETAQIKSVESLDKGNDMERGLKNRHVQFIAIGGTIGTGLFL GSGKSIALTGPSIILVYIGVGLIMFLLMRAIGEMMYSDPSQHTFINFITRYLGRAWGKFA GWTYWIVLILTGMTEITAVSTYFVTFFGTFGIDLKSWKWLIELCFLVALTCVNLIAVRVF GEAEFWFSMIKITLIVGLIVTAVVMLFLGFHYPATHIEGVDGTVSGATVSLKNITDGFQL APNGWMNFLLSFQMVFFAYQLIEFVGVTVSETQNPRKVLPKAVNELIMRILIFYVGALVA IMAIVPWRNFHQNADGSFGSPFIMVFKYAGLDWAAALVFFVVITAAASALNSLIYSAGRH LYQLAQDSESPAMQRLGEVSDHKVPAKAIIVSGCMILFSPLINAIPGISSAFVLFASAAS AVVVFIYVLTMLAHRRYRQSADFLPDGFVMPAWQVCDWIAIAFYVFVYVTLFLSADTRGS AIAGLLWLVVFGGYCLLHERFQNRDLKAALGK >gi|148337405|gb|DS264454.1| GENE 202 211800 - 212714 1233 304 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 52 296 3 248 257 292 62.0 4e-79 MSTENTITTAAADVAAAPNATLDELVGTTTNTAILPEPDAHAYDEIATGDADPLILGGHK FTSRFILGSGRYDLNLIKATIENAGTQIVTMALRRCRTTENNLLDYIPKGITMLPNTSGA RNADEAVRIARLAREVCQTDFVKVEIEHEAKYLLPDNEETIKATEKLAKEGFVVMPYMFP DPIAAKRLEDAGAACVMPLGAMIGSNKGLRARDFIEVIIKNSNVPVIIDAGIGRPSQAAE AMEMGADAVMAYTAIASAGNIPLMARAFKNAIEAGREAYLSGLGKVTENHAVPSSPTNEA DYIG >gi|148337405|gb|DS264454.1| GENE 203 212871 - 213584 899 237 aa, chain - ## HITS:1 COG:CAC2923 KEGG:ns NR:ns ## COG: CAC2923 COG0476 # Protein_GI_number: 15896176 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Clostridium acetobutylicum # 31 235 62 266 266 206 48.0 4e-53 MTFEPSASQAQIDARQHAFDNQPDPATLVSREEIRAALLDRHTAATQDKLDAAHVAICGC GGLGSTIAVALTRIGVGHLHLIDFDRVDMTNLNRQQYFLKDLGQYKTEALRSNLRQINPF TDITIDTVKVTDENVPTLFENEDIICEAFDVPENKTMLVNAVLENLPGKKLVSASGMAGF RSSNLVSTRRVSKNFYFCGDGETAPVPGAGLMAPRVGVVACHEANMITRLILGEEDA >gi|148337405|gb|DS264454.1| GENE 204 213637 - 213831 382 64 aa, chain - ## HITS:1 COG:CC1881 KEGG:ns NR:ns ## COG: CC1881 COG2104 # Protein_GI_number: 16126124 # Func_class: H Coenzyme transport and metabolism # Function: Sulfur transfer protein involved in thiamine biosynthesis # Organism: Caulobacter vibrioides # 1 64 3 66 66 57 51.0 6e-09 MIINGKEEDVATPITVAELVEQRGLRADRVAVELNGEIVPRAQRAQTQLKGTDTLEIVTF VQGG >gi|148337405|gb|DS264454.1| GENE 205 214336 - 215304 1166 322 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 12 310 10 281 284 134 28.0 3e-31 MTTARNMGELAGFAIPRLGMGTMALAIEGRPDRDTAIRTIHAGLDAGVRYLDTAWSYYLP SQPGTGTAEDLGYGEKMVRDALASWDGPRDEVLIATKTGYRRTMEAPNVAENEPERQHLQ AVGSQYGWMADSRPETMICDAKESAAHLGVEALDLLYSHGPDPEVAYEDQVGALKQLLDE GVIRYAGISRVDNAQIDIAREILGDKLIAVQNQFSPSHPDPEHTMEHCAELGLAFVCWSP LGGFLDAFDQRAYDPFREVAGNHGCSYQRVVLAWELSRYERLFTIPSARNPQEINDSFAA TELTLTQDELAMLNASVDARRG >gi|148337405|gb|DS264454.1| GENE 206 215488 - 215979 542 163 aa, chain + ## HITS:1 COG:L131803 KEGG:ns NR:ns ## COG: L131803 COG1846 # Protein_GI_number: 15672890 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 19 127 19 129 154 62 32.0 4e-10 MGFEEELFHELATNTWDKRSRMQQEMVKGAKGEPFAVQELYRKGPLTPSQLASSMKTTTG RVSTLLSALEKKGQITRESDPDDRRVVHVNLTEAGRERAERQRESMREAICWIFSQMGER RAREFVELTEEFTTYMSLCMPGKPRPTADEVKAAFSGNAQEDA >gi|148337405|gb|DS264454.1| GENE 207 216106 - 217857 221 583 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 355 563 16 228 245 89 30 3e-16 MLRIVRYLSKAEIGQMLVALVSIVGQIWLDLTLPDYMADITQLVETPGSEMHDIWVAGGK MLLVSLGSAACAVVTGFIAARVGASFSQRLRSLEFNKVESFGPAEMNRFSTASLITRSTN DITQIQMFITMGLMMIVKAPIMAVWAVCKIAGKGFDWTLATGIAVAILLVVIAVLMRFVM PKFKAMQRLTDNINLVARENLTGLRVVRAYNAEDYQEAKFTEANKELTETQLFTNRAMAI MMPLMNTIMNGLMLAVYWIGAYLIDAADAVDKLTTFSNMVVFSSYSIQVIMSFLLLSMVF VLWPRADVSAQRVLEVIDTEPMVTDGTQDAGKPGEEGEIEFRNVSFAYPDSRHAMLEGVN FKAKKGQTVAFIGSTGSGKSSLINLVPRFYDATQGEVLVDGVNVRDYKLKALRDKIGYVP QQSFLFKGTIASNVAYGDTDRDDDTVRRACDVAQATEFIDKKQKKYDSGISQGGSNVSGG QKQRLSIARAVYRHPEILIFDDSFSALDFKTDRAVRDALEKEAKDSTKLIVAQRIGTIMN ADRIIVLDDGKVVGQGTHEELLDTCEVYRQIAESQLSEDELKR >gi|148337405|gb|DS264454.1| GENE 208 217869 - 219710 217 613 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 313 596 73 353 398 88 26 8e-16 MPRGMGRGRGAVEKPKDFGGVMKKLVKFCSRYIPVMIFALVLGAAGTVCQIIGPDKLKDM TNEITKGLPAMVHGKPVMNSIDMDAVSRIAWLLVALYVGYALLSYLQSWLMANVTQRTAQ QLREAISQKINRLPLKYFDKVSYGDVLSRITNDVDAIGQTLGQSVGSLITSITLFFGALI MMFYNNVTMTLCAIGSALLGLIVMGLIMKVSQKYFAQQQIALGDVNGHVEEMYSGHTVVK AYCGEEDSIKRFEKYNNDLYVSGWKSQFLSGLMMPLMNFIGNFGYVVVCVVGAALAMDGK IEFGVIVAFMMYIRLFTQPLSQFAQAFQNLQRCAAASERVFGFLDEPELADESGKRALLG VDADGKPQPVRGDVEFSHVRFGYDSDKTIINDFSASVKSGQKIAIVGPTGAGKTTMVNLL MRFYEISGGSISIDGVDTKSVPRWNVHDQFSMVLQDTWVFRGTVRENIAYSKSGVTDEQI VAACKAVGLHHYIMSLPDGYDTVLDDKTSLSQGQKQLLTIARAMVEDAPILILDEATSSV DTRTEELIQKAMDALTVGRTSFVIAHRLSTIRDADMILVMNGGDIVERGTHEELLAKGGF YADIYNSQFTLAE >gi|148337405|gb|DS264454.1| GENE 209 219694 - 220032 118 112 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSAVSKKLTPCSAAVRTTSAAASASSASMRITPNAACDATTADLPISMLFMTAHFLCDFQ IRQSIDVSHLNGKSAVPSAQHNKNAEAKTQKSGGVVPPDFLASQHTNLTRPA >gi|148337405|gb|DS264454.1| GENE 210 219881 - 220861 1362 326 aa, chain + ## HITS:1 COG:lin0643 KEGG:ns NR:ns ## COG: lin0643 COG4989 # Protein_GI_number: 16799718 # Func_class: R General function prediction only # Function: Predicted oxidoreductase # Organism: Listeria innocua # 1 326 1 305 305 275 45.0 1e-73 MKSIEIGKSAVVASQAALGVMRMDALDADAAAEVVRTAAEHGVNFFDTADIYGFNVNHDH ASSRVLGRAWKDAGLKREDIFLQTKFGINIDFSDPNNMHATRYDFSAKHLITRLDEELEA LGTDYVDFALLHRPDTLMEGEEIVEAFTTLHKAGKVRHFGVSNVNPWQAELLQSWLGDDP AMRLEANQLQFGLMHAQMVSDELMTNSGAEGMVVANHSDGLLSYSRLRHMTIQAWSPFQS GTEYGPFVGNEHFPELNKALDEKGAKYGVSANAIATAWVLRHPAKIQIVLGSMNPTRLGE MLDGADIDLDKQDWWDLYVAAGNLIP >gi|148337405|gb|DS264454.1| GENE 211 220946 - 221998 728 350 aa, chain - ## HITS:1 COG:no KEGG:BAD_0096 NR:ns ## KEGG: BAD_0096 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 350 28 377 377 668 98.0 0 MDSIAPLAQRMPYTTAFPKALGTGLLISTPHPITAELRGEMERFIDEYEHALSRFRADSL VAHIGNAEHGGHFDFPDWAGPLFDLYDALHAATRGAIDPCVGEDLIRLGYDPALSFTVEA DAGERLGALHGRAVWGRDVVRSSGTTLVTRSPVHVDFGACGKGYLVDSLGGLLTDSELSR TSHVKSAETTNPTCQSSTSDSKRESAAPEFVIDAGGDLLARTNKPIRVALEDPDDPSCAV GVALIGDGAFCASAPSRRHWEVAVNEQTHLAIHHLLNAIDGLPVQQTEAAWVAVRSASFG DYPTAVADGLATALFVADPNELRSVFVFDCATLDADRHATISAGFPGRFF >gi|148337405|gb|DS264454.1| GENE 212 222738 - 224525 2380 595 aa, chain + ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 182 573 21 406 433 231 35.0 4e-60 MSSRVAQRHAAGSYDSCDSRVSASGRLITLVAALMIALATLFVGIAMPRQASAADGNQTN FDSWTAVAQNIAKQLATAEKDYNDGDYGQAGTGFQTAHWIGYDASNFSKAVNDTISADKQ QALLTQFTDLEGLAYQQGQGSAIANGINALNADLDTAAQTLDGNANLADPKTYAKQRAEQ TAAERKKLDAAKKNSSKGKGDRTWSEVASEMNVILDKAYKAAISGKGAEGSSLVNDAYYQ YYEKLGFEKNVMNAISGDRVSQVEYQFKMTRKTMRDGSSDKEIKKLVDDLKSWLVEDAAT LDGGAAGNVNAFTKAITSSAGQAFLILIREGLEALLVVAAVVAYLVKSGNRRFTKWIYLG VLAGLAGSGLVAVLFTFLFGGSGPVQEISEGVCALIAMLMLLWTSNWMLNKSSVEAWNRY IRTKTESAVADAQNKVAAGEGVGLGMVVSLAMLSFLAVFREGAETVIFYESIYSMSRDAQ GMWIGGIAAGVVLLVIFLVLRFTSVKIPIGPFFLVTSILMAVLVVIFAGGGIHALIEGDL IDGHYLSSVPTNDWIGLYPYVECLAAQAIAAIAVLALFAVGFARKRKLRTPDNRK >gi|148337405|gb|DS264454.1| GENE 213 224587 - 225246 962 219 aa, chain + ## HITS:1 COG:TP0971 KEGG:ns NR:ns ## COG: TP0971 COG3470 # Protein_GI_number: 15639955 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Treponema pallidum # 53 219 40 204 204 141 44.0 8e-34 MKNKKIAALLGILLAGSMAFSLSACGNSNDSAASDKSSASASASKADDSSKDDSSDSAGF EEIQVDEKHSDQECGPLTVNAVYFQPIDMEPSGMGLKAADASFHLEADIHANQKGTELGY GKGDFVPDLTVNYDIIDKTSNASVASGTFMQMNASDGPHYGANVKLDKAGAYKLVLKIES PEKKGWMLHVDPETGVKGRFWTEPIEVTFPDWNYTPQEW >gi|148337405|gb|DS264454.1| GENE 214 225510 - 226781 1667 423 aa, chain + ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 135 422 5 294 298 163 34.0 8e-40 MLLQFVTVLQGVLAPALLVMALSVMLTVGEGRDKPLSAYWRLAGFVVGFAGAVVFAALRA TAVITQRTFVNYPTLWCCVILDVAVFVIVLFARRITADWHNHRALLDIANLVAALAIAAT TFRALPDVILRLTIFVEPGDPIFTSDMLLRALGFALGAAVAIIAALIFRTMRSTAVRWSF TTAVLLLVALLFAQHFTDLAQILQSKRIVSFPTAAFLALVWGINHQRSLTIAMALVFAIP AIASIVMGFKVKPTGANEAIARTHIAFRRRAKAAGAFSLVAMICVTVALTYGVAQTQKVV TLSPPEDYSLADGVATIKFSQISDGHLHRFEYRAKDGTSMRFIIIKKNGGAYGVGLDACD NCGDAGYYEKDGKIICKKCDVAINLATIGFKGGCNPIPFDYQVKPGKIVIQTSTLDALSS HFQ >gi|148337405|gb|DS264454.1| GENE 215 226807 - 228306 1576 499 aa, chain + ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 499 2 428 428 318 38.0 1e-86 MFFLKMISRSFSRQFKRRLLIAVTVCLSATVSVAMLGVVFDVGDKLNAELSTYGSNIVVQ PKSDAVVSDLYNTGDSAGSASGSSSGSDGGSTSDGSAAADSADPTAFLKESDAQKIKTIF WAFNITNFAPELNIHADAGCVGSGAGSAGSAGTAGASGAAASAAKCKATNVPIVGTWFAK TLHMDSGESTVAGMNGMRSWWKINGTWPKDDSEQAMVGSALAAKLGVNVGDSVTLDKTIA VGADDNTNGGTGKTGKSSTERNRVKVKIVGIFDSGDSDDSAIYMPSIAAQTLANLPNSID KIEVKALTTPDNDLARKASKNPNALTQDEWETWYCTAYPSSIAYQIEEVLPGAVAKQVRQ VAALQGDVLNKTQAVMVLMTVLSLVAAAIAVANLMAASIGERGSELALLKAIGATDGAVS RLMLAETAVISLVGAIAGALLGSGVAQIVGHVVFGSGITMRPMVFVLVFVLLAVTVLVAS LSSIRAILGLRPAEVLHGR >gi|148337405|gb|DS264454.1| GENE 216 228337 - 229653 176 438 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 316 438 292 413 413 72 29 5e-11 MTNRKMFFTMLWGAVFRRRSRAMMAVIASLVGAATLFCLASVCVAVPQQMNEEMRAYGAN LIVTPASATGKSQGIDTATVRNVTALIGAGHSVKSAAYRYESVRINSAPYTIAGVDVKAV RALNRHWNVTGDWPGSGNVMVGRDVADALGVKVGSRVTIGYRAADASASASSSASAKSDS DESTETAESSAQGTQSTQTTQGEQTTQATENGRVSSDIMDNNGTEFRIAGIVDTGGNEDS IIYATTADMAKLAGSKRGADVVEYSVNAMGDELNDIVNNINRSADKNPNSAVKAQTVTRI TSSDTRIIAMLQTLFWIVSLVVLVLTLVGVGTTISSIVSQRRNEIGLRKALGADSRAIGV EFYVESGIYGLIGGLLGTAIGYVLARVLCSTVFGRALGLNWLLCVGSLLLSVAIAVIASI PPVRRATRIDPAIVLREE >gi|148337405|gb|DS264454.1| GENE 217 229656 - 230546 1144 296 aa, chain + ## HITS:1 COG:FN1352 KEGG:ns NR:ns ## COG: FN1352 COG1136 # Protein_GI_number: 19704687 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Fusobacterium nucleatum # 1 218 1 218 224 290 61.0 2e-78 MDNEHMLLELDHISKIYGDLHAVDDLSLTVPQGQWLAIVGSSGSGKTTLMNMIGCMDTPS KGSVMLEGRRLEDLNARQLADVRKNMIGLVFQKFYLVPHLTAVENVMVAQYYHSVVDEKQ AMEALERVGLKERAHHLPGQLSGGEQQRVCIARALINCPKLILADEPTGNLDEKNEKIVL DLFRQLHEQGTTIIVVTHDALVASCAQREIMLNHGVLVGEQWNDEEAKRAYEAAGGKPAF TGSAAEGAQNGGIAISFADPTKAAKTGDTDAANVAVAAGVADDTDVEPDVTKGEQA >gi|148337405|gb|DS264454.1| GENE 218 230543 - 231097 735 184 aa, chain + ## HITS:1 COG:no KEGG:BAD_0103 NR:ns ## KEGG: BAD_0103 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 184 1 185 185 251 91.0 8e-66 MSTAQSNAVKVIALSAASIALLSACGEPKATPMDDEYAGNSGESVQSQEEKSKTDGKASG DTADDGDATKNRADANSATSDKQDTGNYADGDYSINGQYGPVGEDTIDVHLTVKDQNVTA VKIVGHPFTSISKKHQNDFAKAVPDAVVGKPLKDLKVDKLAGASWTSEAFNKALEVARQE ASIQ >gi|148337405|gb|DS264454.1| GENE 219 231162 - 231842 562 226 aa, chain - ## HITS:1 COG:no KEGG:BAD_0104 NR:ns ## KEGG: BAD_0104 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 2 226 1 225 225 400 96.0 1e-110 MMRGTTQEVTRKTVQKTTQEDVSTARGRRERLREQTDRKIMKATLGIVISDGIGAVTIEE VARRSGVAKTTIYRRYRNADDLLQRIQPEVAGLPNFNDLKPSRNGLATMLQRIQDCFDSE LGLKAVGVVLSSDNATLKAIAAQVLAPAEERFVGFMERGIADGVFQNRLDYTFLFSTVLG SMLACKALAGQEAGGERQSGKERKPDSWAENMATLLWPNVCAESAR >gi|148337405|gb|DS264454.1| GENE 220 231839 - 234034 2568 731 aa, chain - ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 687 1 670 709 271 29.0 5e-72 MKTIWKLFVGDIRRITSNVVSIIIVIGLVVIPGIFTWFNVAASWDPFANTGNLKFAVANE DDGYRSDLIPVKINIGDQVVNTLRSNDQLDWTFTTKKEAINGTKSGEYYAAVVIPKNFST RMMTFFASDGDHAEIAYYNNEKKNALAPKITGQGADTVSAQVNETFSETLTSTALSVASQ LANQLDKPAAQEQLTQFNGNISDFAETLTDASGTLRTFSTLTQSARHLLESSDGLIANVS GNAKSAGTTLKQAGSGVEDLTGALKTGTTALGTALTDSANSFTAMEADVDSLFGNAGTQA GNTANALRNQATNISKQAQSYQQIYDSLDALSANEKLPEAVRNAIDHLKTNVGTTITQLN DLASALNGSADNIDAKVSDTTAERAEIKKLAQQAATSVSGIKTDYESQLKPQLDDIATSI TSTTTALNATAADLKGALGNLNGTTKTADKNLTAISSVLDSTADSLAGAGKKLGAFTGTL TDALNSGDMSAVKDVLSDNTDSLAAALAAPVKVKRNAVFPVKNFGSQMAPFYTILPLWVG SLLMAVTLKTTVSRKVRKELDDPKPHQLFLGHYGVFGVIGLLQSTFSLGGSLLFLHVQAV HPLLFMLSGWVSSLVFSFFTYTLVASFGNVGKAIGVLFLVMQISGANGAYPLAVLPKIIS GISPFLPATHSITAMRAAIGGIYSNDYWFAIGALLLFIPPLLLIGLLLRIPLVKFNHWYV SKLESTKVIAA >gi|148337405|gb|DS264454.1| GENE 221 234031 - 236868 2904 945 aa, chain - ## HITS:1 COG:MTH1858 KEGG:ns NR:ns ## COG: MTH1858 COG1511 # Protein_GI_number: 15679846 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Methanothermobacter thermautotrophicus # 1 716 1 630 631 245 24.0 3e-64 MHNVLQILRRDFKRLVTVPAAWVIMIGLILIPPLYAWFNIYGFWNPYGNTDSIKVAVANM DEGTDNALLGKVNLGDQIEGTLKSNDQLGWEFMGKANAMEAVESGDCYAAIVIPSDFSED LANVVTNSKHRPTLEYYVNEKASPISPKITDQGATVVDRTVNNTFVSTVSDVLVKAVNSA NGTISGNTNAIANETIGELDNTKRNVGTIRSAIADLDTQLANVPQQTKAARNALNDVQLA AASAGRGLAGASTAIGTAQTQLNTLSSNANSALETGSGLVSQATAQSTASINQISSAVSA ASGSAQQAVTGMQNITDSNAKLLEKLKSASDNAQYQQIISKLENTNNTAAGTLADLKTLS ENTQATAGSVSKLSTDFNIGTQNSLKSAGTARNAINSGALPRLNSALGSLAGTAGTLAGT VTSQDSVVRQTNIVLDQLDQVASDTRIGLEQTDQQLAKMETKLTTVSTDLKALGTADLLA SLTGSGSLDADKIASFMESPTVIDTKNVYPVNSYGSGMAPLMTNLALWVGAFAFVVICKV EVDDEGLEGLDPTATEKYLARYLLLGTMGVIQGAICTVGDLILGVQTACAPLFILTGMIT SLVYLSITYALSTTFMHIGKGLCVALVIVQIPGASGLYPIEMMPKFFRMVYPFVPFSYSI DAFRETIAGFYDGHWTKAIGTLLLFAAMAFVIGLAVRPLLVNLNRLFAREIKESDMIIGE EVELPERGYNMSQAIQVLADKGGYREVIEERASRFAELYPKLKRGALVIGFVVPVTLAAV FSFTNGEKVVVLATWVVWILLIMGFLMVIEYMRDNLNRQVELGHLSDESIQSMLVERQAA RIRRKKRAQQERRNRLLRKTRKRTSGKRTTSDNRNTSVIKETTENVTGVNHNEDDGIAIL VQKMQKMQTTGPSAAANDAATDTTETTETAETTETTENTEERSNA >gi|148337405|gb|DS264454.1| GENE 222 237331 - 238635 1111 434 aa, chain + ## HITS:1 COG:L191765 KEGG:ns NR:ns ## COG: L191765 COG4905 # Protein_GI_number: 15673533 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 227 379 3 151 235 72 28.0 1e-12 MSETAQSESRSEDSAAGKTDGEIKAIAAETEIAAIEEGGKQGTGEVGNPADRRLPLIVRI YGIVMLIEGVVTLPIIVLSCLYVVQAVLSGDMTFDALSLTTILSAIHAVVLMVTTACLTV FGVLLFRNKRRHIAQWTYLLIPLTLAEGLLSLALKGLGLNLVSPAVQLVVLIALHITADP SLREERRLQFALRRMDARSAYENAASQGMAGRDLTGKGYISLDFFNLFWLFTIGCVFGLV IETIYHFILFGEYQDRAGFLWGPFSPIYGFGVVIVTVLLNHLWQSNWLLIFCSSAVIGGA FEYFTSWFMQAAFGIRAWDYTGQWLSIDGRTSGKYMFFWGILGLIWVKLILPRLLRLIQR IPWKIRYSLTLVCFILIFVDGVMTLMALDAWYSRMAGVAQNSPVSQFFATYFNDDFMAHR FQTMKIDPSTAGRM >gi|148337405|gb|DS264454.1| GENE 223 238851 - 239087 361 78 aa, chain - ## HITS:1 COG:BMEII0932 KEGG:ns NR:ns ## COG: BMEII0932 COG0695 # Protein_GI_number: 17989277 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Brucella melitensis # 1 73 5 77 77 68 36.0 3e-12 MTVTVFTNPNNPQCEATEQELSKLGVRYVAVDLTQNPSTFEQIKDAGFKQIPVVISPNSS WSGHRPDLIRQLAQSIAA >gi|148337405|gb|DS264454.1| GENE 224 239803 - 241407 1634 534 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 531 9 472 472 464 45.0 1e-130 MSCTTILVGKKASYDGSTIIARDDDSGSGRYDPKKFVAIAPQEQPRHYRSVLSHVEIDLP DNPCRYSIVPNVLPNRGILAEAGVSERNVAMSATETIAVNERVLGADPLVVLQPADEANG KPETPGGIGEEDIITLVLPYVNTAREGVKRLAELLETYGTYESNGIIISDVDEIWYVETI GGHYWIARRVPDDKCAIIPNQLGIDYFDFDDAFSDAREFMCSDDLTEFIERHHLGRAAGT QGGMNNGHCNPRVVFGTATAKDHIYNTPRAWYMYRQLNPVEAADSTPESDDIPWCLEPEH AVTVEDVDFLLGSHFEGTPYDPYGTQGTEESRHRYRPIGINRTGHMVAMQIRPYAPAESR SIMWVSYGSGAFTTSAPFYANVDDTPAYLRDTTPEVSTDCLYWTNRLIATLADAHFYETS NAVEGFSEDVRSFGHRLVERTDDALAIGGSATGAGGAGSGAGSAVGGSGSMSGAAVDSGS DGLASPTSVPARLAAANDEMAEYLRSRNTKLLGDVLYTSSNLMHNSFAMSDRWN >gi|148337405|gb|DS264454.1| GENE 225 241592 - 242623 1314 343 aa, chain - ## HITS:1 COG:CAC1488 KEGG:ns NR:ns ## COG: CAC1488 COG0463 # Protein_GI_number: 15894767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 5 343 2 338 338 281 39.0 1e-75 MQEKKTLTFVVPAYNMTEYLERCVESLIASKRNDDIEVLIVDDGSSDGTLEMAKTFEARN PGIVRAIHQENKGHGGAVNTGIAAASGMYVKVVDADDWVGPESLEQVMAVLRGEVGKDEP LDMLVTNYVYDKVGKRNKHVVNFRHAMEPGKRLTWDDLGHFGLTEYILMHALIYRTAVVR ESKMQLPEHTFYVDFIYAYQPFPWVKSLQYVDTPFYHYFIGRDGQSVQTDVMIRRVDQLR LVNQCMVRATPERGTVPDGLYRYMIHFLAIQSSVASVFMILSRDPENYEKKKAMWADIEA YSPTIYKDVRKKAMSRALNLHGSLGRFVIRKGYFVAEHVVGFN >gi|148337405|gb|DS264454.1| GENE 226 242807 - 243742 1085 311 aa, chain - ## HITS:1 COG:MT1047 KEGG:ns NR:ns ## COG: MT1047 COG1309 # Protein_GI_number: 15840447 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 19 219 4 202 202 202 53.0 6e-52 MVKGLSTGREKLGSMANTSRMTSYQRREQLIEIGRSLFAAKGFEAVSVEEIASTAKVSKP IVYEHFGGKEGLYAVVVDREMRALTDVLINALSDPQAHPRQIVERTALALLTYVEENAEG FRVLTRDSPKTDPSNSFNSLLGDIAVRVEDILTDAFKRQHLPAKSVPYYAQMLIGMTVYT CQYWADQRKLSKEQLAAHIVNLAWYGLSRMEAKPELRYESEKAAREAEKQAAREAKAIAK QEKQGKKAAKSQEKAVAAGDDATDGTTVTDGSQAVGKSQAADESNESDETNESQKPQSPH ESQKQSTIDEN >gi|148337405|gb|DS264454.1| GENE 227 243679 - 243831 67 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSDSPETDIQRPDFTLHVSDSAESDDNGTGWSRGYPRGVKNWAVWLTHPE >gi|148337405|gb|DS264454.1| GENE 228 243958 - 244251 290 97 aa, chain + ## HITS:1 COG:no KEGG:Blon_0221 NR:ns ## KEGG: Blon_0221 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 97 1 97 97 160 96.0 1e-38 MDHLPEWLANLAEEDLAFIKNFVLSSGSLKQMSQLYQVSYPTMRLRLDRLIEKIRLNDNE TEDPFILLVKSLAIDDRYDVDTARILIDEYRKRRDES >gi|148337405|gb|DS264454.1| GENE 229 244248 - 244421 163 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486488|ref|ZP_02027895.1| ## NR: gi|154486488|ref|ZP_02027895.1| hypothetical protein BIFADO_00303 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00303 [Bifidobacterium adolescentis L2-32] # 1 57 1 57 57 91 100.0 2e-17 MSWTWIALLIEILGIIAVFVLVFLIARSLIRYANSLKKGDSSSKQAAEDKKITLHDL >gi|148337405|gb|DS264454.1| GENE 230 244471 - 245181 378 236 aa, chain + ## HITS:1 COG:no KEGG:Arch_0524 NR:ns ## KEGG: Arch_0524 # Name: not_defined # Def: hypothetical protein # Organism: A.haemolyticum # Pathway: not_defined # 36 236 55 265 265 201 50.0 3e-50 MHSYKYSLLGVVAAVAMSLTAIAPASAEPIESSNPSSNSITLSAEDKMEISDILTSYGVD EEKAQYLVSRYEHGYAWDSFTPGKQPIAATQRKTLYSVETVKTYEDGSIAVSTVPNFEAL ADAPQTRGITGCQYRQSGSTRYWKNCDGTVNLAVISMGFNFNYQNVNHSNPKITHYGPYH HHIIGGALSNFRFDRISNSQVRLSADCDVAFRGFPAGWTAWMQVNVTGDNAWTSNN >gi|148337405|gb|DS264454.1| GENE 231 245592 - 246866 660 424 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762490|ref|ZP_02169555.1| ribosomal protein L28 [Bacillus selenitireducens MLS10] # 130 424 26 321 336 258 48 3e-67 MDTNVIIAIVAVVVIAALLAIGGWWFGKSRKSAVDKSTEAAKAKADARLATEKSAAQSAA ASAENAEKTKETAESAATEAVESATSSATPESPVATEPTPVGSAVTESATPAVETPEAAG TRMQRLKARLSKSGNPFGKALFNILAKDQLSEADWEDVEDTLLLADVGAEASEQLVEELR NDARIAGQSDPAEVRAALKDKLLKLVGIDTDRRLNANKEGANKPSVIIMVGVNGTGKTTT AGKLSRLLVSEGKQVMLGAADTFRAAAADQLETWGAKVGVPVVRSDKDGADPASVAFEAS AKAKEENADVLIIDTAGRLQNKSNLMDELGKIRRVTEKNLPVDEVLLVLDATTGQNGMTQ AKVFAEAIGITGVVLSKLDGSAKGGIVISVQKELGVPVKLVGLGEGPDDLAPFDPEGFVD GILA >gi|148337405|gb|DS264454.1| GENE 232 246953 - 248143 1475 396 aa, chain - ## HITS:1 COG:L176399 KEGG:ns NR:ns ## COG: L176399 COG0475 # Protein_GI_number: 15673897 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, membrane components # Organism: Lactococcus lactis # 5 380 4 376 379 200 35.0 4e-51 MATFIISLCAILMLTTVSGLICRKAQLPEVIGQILVGILVGPSLLNVMHMSDSLSLFSDL GIIILMFLGGVGCDLQLLKKYSKAAVIIACMGVVFPVAVMGGVSLLFGFKPIPAAFIGVV FSATSVSISVAVLKEAGLLDSKEGVSILGAAVADDVIGVILLSVMCTLVNTGSVDVAGLG LILLKQVLFFVAAAVVVVWVAPALMTLAGVLKAPSGIAVMAVIICLAMAWASNLAGLSYA VGAFFAGIAVSNSDYAEDADRYIEPVGDTLFVPVFFVGIGLQTTGVDDTKMIVFIAIMTV LGVITKVVGCGLGGRMAGFGGASALMIGAGMVPRGEMALITAQIGFNEHVLGSEYYSTII FIISLVTLVAPLLLKLTIRKVPGVGAAAAGTAGAEQ >gi|148337405|gb|DS264454.1| GENE 233 248558 - 249853 1654 431 aa, chain + ## HITS:1 COG:Cgl2012 KEGG:ns NR:ns ## COG: Cgl2012 COG0004 # Protein_GI_number: 19553262 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Corynebacterium glutamicum # 6 421 26 450 454 383 55.0 1e-106 MGQLDSGNAAWILTSASLVFLMTPGVAFFYGGMVRAKAVLNMMIMEAAALSVTMIMWVLW GWSIAYAGTSVGGIFGDPATGFLLKDTMVSDKGVFTSAALNGNNYPVSVDVAFQSAFAMI TVALICGAIAERVKYSTWMIFVALWITFDYAPLAHMVWNGGLLSADGAISQAIGAAAHDF AGGTVVHINAAVAALVIVLIIGKRKGFGTQPFRPHNVPFVMLGAFLLWFGWFGFNAGSAF AANGTAGYAWVSTSAATAAAMLSWGFTEKIRTGHYTAMGAASGIVAGLVAITPAADVVSP LWAIVLGAIAGVLTCLACGLKFKLGYDDSLDVVGVHGVGGFTGTVLIGFFGEGTGLFAGG DWRQLVVQLIVALVAIVWSAVITGIIAFALEKTIGWRVTEAQEVGGIDLADQGERAYDFA GTASSVLKEVK >gi|148337405|gb|DS264454.1| GENE 234 249855 - 250193 517 112 aa, chain + ## HITS:1 COG:MT2987 KEGG:ns NR:ns ## COG: MT2987 COG0347 # Protein_GI_number: 15842462 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Mycobacterium tuberculosis CDC1551 # 1 112 1 112 112 135 63.0 1e-32 MKLITAIIQPHKLDDVKEALAAAGVHGLTVSEANGYGRQRGHTEVYRGAEYTVDLIPKIR IEVLSDDADAETLVGVIVKSAGSGTIGDGKVWVAPLDSVTRVRTGETGSAAI >gi|148337405|gb|DS264454.1| GENE 235 250350 - 252176 2142 608 aa, chain + ## HITS:1 COG:MT2986 KEGG:ns NR:ns ## COG: MT2986 COG2844 # Protein_GI_number: 15842461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 33 608 15 573 808 246 33.0 8e-65 MTSAVDGLKQRFMAMSQPDADGVYRNGAAKRKARTDLAMGNLTQLWNEACETVSFDVPAT GIGLGAVGSLARGQVGPSSDLDLVVIYEPHALTDQQLNELANKLWYPIWDSGLDLDQSVR TVAQCEAVTDRDLPAAMGWLDVAPIAGDTGLIESTAVSILERWRKAARKRLPELLGFAKS RLDEFGRMAYINQPDIKEARGGLRDSVLVSALAASWLADRPHGTYDDAVERLLDVRDCIH LVAGKDTNMLLSPYQAKVAAMLGLADPTLPDGEREAKSIDDLQTLLARVGRQIAFSLDST ASRAEHSLTHDKPRFAFFQVFQPRGGGKRQAPTFDVIAPGVAKHEEEIVLAPGAEPAADP NLVLRVAVAAAEYGLPIAPGTLRNLKKCPIGDRNWTDESRELFIRLLASGSALLNVWEDI DFIDVPGKLIPEWLGVRNRPSASAAHRYTIDRHMVEVVTRLGRETPSGGRYDDRHYEALL LAGILHDIGKRPGVANHAAEGARHATVVVERMGFDRDIVRWVTLLVREHLTLSEFATGRN PNDPNVGDDLAGRLDHNPVLLDMLFDLTRADGSSLGATSGETISKQYGWSKWRETLVRTM YNATRYHM >gi|148337405|gb|DS264454.1| GENE 236 252563 - 254020 1822 485 aa, chain + ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 12 476 43 509 510 448 50.0 1e-125 MAENDSWNNGSAQNRGFSNAGNGANGMNGRSSQAVRDALFDRVPPHDDAAEMAVLGGMLM SKDAIGEVSQMIDVSDFYQPRNQTVYEAVIKLFSASQPVDAVLVANELLAEGNLEKVGGS DYLHSLVASVPTAANATYYADIVHQRAILRNVIAAGTKIAQLGYTAEGSQAEDVVNLAQA EVYEMSTGKVRQDYAPIGTVIADTLDQLDRLQSGEVSRGVPTGFRDIDDVTQGLQPGQMI VVAGRPAMGKSTLGVDFARSAALHHGLTTIIFSLEMSKNELAQRIISAESNIPLAAMRRA DDITPERWAILNELQGKLQNAPLFIDDSPNMSLMEIRAKCRRLKQTNDLKLVVIDYLQLM TSGKAVESRQQEVSDFSRALKLLAKELEVPVVALSQLNRGPEMRQDKKPQLSDLRESGSI EQDADVVFLVHRPDAYDKEDRPGEADIIMAKHRNGPTDTFNLAFLGAYSKFKDMPQDYQS QQEAV >gi|148337405|gb|DS264454.1| GENE 237 254022 - 255605 2041 527 aa, chain + ## HITS:1 COG:SP1589 KEGG:ns NR:ns ## COG: SP1589 COG0769 # Protein_GI_number: 15901431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pneumoniae TIGR4 # 19 515 20 437 447 149 28.0 2e-35 MAWNSFATPLIGKAVRTASRLAHGGGSAFPGKIVERIDPQFLSRTLAQLPLGVVLVSGTN GKTTTTRMVASMLQSLGLKVFTNPTGSNFTRGVVSSLLAEVSLSGKLDADIAVLELDEAY AVHFVKQVPPDYCLLLNVMRDQLDRFGEIDNTARLLSKAAEATTGTVVLNREDPRIARLA DVAHTEDGVEVRYFGLDESLRGFFPSDDDMSTTVDAEAHDSAEHGGNIGDSGNAGDTADA VAAAAPATSQPQDGPDALPADVTLRAVGDHRATFAIDGETYETAVKLEGVYNLYNAAAAL AVVRAVAADAQAMFLPFEDALADSVDADGADTGTETDGNGSHDAIDQAAADEILRAAGVS PRMIAFAHATTQAMIDTAGEVTPAFGRGEVITVNGTPVELLLVKNPMGFRLSLASFKPEG CDTMICINDEYADGRDMSWLWDVDFTSLRGTGVKAVSGVRAWDMALRLEYDQVPVESVST DLEESVVNFVNANSGTPKHIYCTYTAMLKTRAALAKIADVADAGVGK >gi|148337405|gb|DS264454.1| GENE 238 255671 - 256429 991 252 aa, chain + ## HITS:1 COG:alr2718 KEGG:ns NR:ns ## COG: alr2718 COG3442 # Protein_GI_number: 17230210 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Nostoc sp. PCC 7120 # 10 215 13 235 273 145 40.0 5e-35 MSQVIDIVSLYPKDMNIYGDSGNVLTIQRRLALYGYEPRVHAYNQGCDWPEHVDMILGGG GQDTGQKKIIDDFFQRADLLRSLAADGVPMLMICGLYQLFGEYFETVDGSRLDGIGVIGA YTVGQETRMIGNLTETSADFGKIIGYENHSGQTFLRDGVQPLGTVEQDGTGNNGEDHTEG ARVHNVIGTYMHGSLLPKNSAIADFLIRTAVERRYGTFDPAAAGQTDAQRAALHRIDEIA DRARRVAMSRPR >gi|148337405|gb|DS264454.1| GENE 239 256578 - 256817 414 79 aa, chain + ## HITS:1 COG:no KEGG:BAD_0119 NR:ns ## KEGG: BAD_0119 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 79 28 106 106 120 97.0 2e-26 MADFNFGDGLRKVFLAGVGALATTVEKSQEIVDDLVKKGELTVEQGKALNAELKHKVEEA KEAPESKDAAPAETEDKAE >gi|148337405|gb|DS264454.1| GENE 240 256957 - 258837 2319 626 aa, chain + ## HITS:1 COG:CAC0033 KEGG:ns NR:ns ## COG: CAC0033 COG0661 # Protein_GI_number: 15893331 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Clostridium acetobutylicum # 122 616 34 526 532 286 30.0 9e-77 MSLKHPSDKPDAARPESVEPVTLSDRGNAVINPTADPSPDAASQANGLTDELAHESADDA GETDDTGKAAGANAQSSETIGIFGARKDTFSARYHLTRRGKLRRLAQIAQIANKFDVVHG LTPVKMRLMLEALGPTFVKVGQILSMRSEILPQSFCDELSKLRADADPMPYSTVLQVLED EYGRPVDEIFDHIDPTPLGSASLAQVHRAKLLTGEDVAIKVQRPGVRETMAQDVSIMRTI AGIATKTMRSAQVVDLSGVVEELWDTFESETDFLIETRNLAEFKRFCERYKYMDCPKPYP ELCTEHVVVMDYVEGISVSHPDELLAAGYDLKEIGTKLVDNYATQVLDEGFFHADPHPGN IMVRGGQIVLLDLGMTGRLNAKTRSVLKDMIFAVAEQDSPKLADGLLRFAGAEADPEDYP ALLADLDVIVKEFGTVDLAELDIAAMLTALTQMAQRHGIEVPSTVTTVGRALVTLEGLLD EFIPDVNMIQIISDHIASSTSKKDFAKDETKSLALESHQALHSLLAAANELKVASRMLTR GQLRVNMEMVGSQEPIHLLANMVNRLTMALIVVGLFIGSSIVYYAGIKPVIFGIPIVGFL GYVIAFILSVWIVFDIYFKGRDSKKR >gi|148337405|gb|DS264454.1| GENE 241 258809 - 259042 145 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPPKQYPVNGSILGGVKSLTTCLIIQQKAVSHRIIRERKCNRKRRYERNHQHECERAATQ ATRNARRPATASSNRVL >gi|148337405|gb|DS264454.1| GENE 242 259096 - 261309 2469 737 aa, chain + ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 529 688 56 213 251 196 58.0 2e-49 MQAGKSQRSVLALVITCALILGFGIPLIPLVGVDSAEGTEVSAASDVATVSAENSLQNGS FEQPDVYQYRETSDVPYWKSTTTSGNIEIGSVFKNGNGDNDSLHMRTGEKVAAAEGSQFG KPATSNGNDQYAELNSNQASSLYQVVNTVPESKYDWGLYHRGRQGKDAMALVVGPKQNVA PMKTSATSNDQLQQIVTWVSGQQDRDFGLDMVHFSQTGTSRKITVYTTKFASGGRFDTTG VSSPFSWSKDSRHTERWELWIIVSDCDEWYGHGEFNGDEDPDASYIVPEGQNETLLGFVA VSTSTGDITSGNLLDAVQFRQYYRMDFQTPPSGSGTYSTDGETPVAFDSAASKSDYALVG SDVTVTAKPVDASHHFLGAYVGDTFVDADQWTANADGSYSLTRTLTANLSVRLMFSANTV VYNVNGGDPYDSDNPETGHEIYIKRGSSYTNKTAATKRNDDGWRFTDWKYDDDHILGVNH KITYGSKTNDLSISQNDQTVVSGIPAEKGITLTAQWTYRQAFATTPEEDAEYTSFLNEDP NGVMAYINIPRLKSTLPIYHYTTPESLQKGVGHLRGSALPVGGKNTHAVLSAHRGLPTSR LFTDLDKVRKGDHFYITVLNRTLAYEVDRISVVKPDQTKELSVQPGKDLVTLVTCTPYGV NTQRLLVRGHRVPYNAAQAKHEAADSAVSSFTVYGFVATYGTLAIALAGIAVLRRNAAAR TPHHAADWPHSLTVSVR >gi|148337405|gb|DS264454.1| GENE 243 261818 - 262882 1209 354 aa, chain + ## HITS:1 COG:CC2157 KEGG:ns NR:ns ## COG: CC2157 COG0584 # Protein_GI_number: 16126396 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Caulobacter vibrioides # 91 349 35 255 257 102 31.0 1e-21 MSKSFLKKALLGGAVAAGAAVWAIAPRSFSDKRRHYVPAVPDVWYAHRGLHDAGSGLTAQ YANESGEYVALARRMAMKAGYGSPDTPGVIAPENSLAAFAAACEAGYGIELDLQMTRDGE VVVVHDGDLMRVAGDPRRIADLTYDELTRIPLFPTDAPGACKAAPLPLALENPPLVTTPD NAPEGYYQHVPLFADVLKVVAGRVPLIVEYKFDDNSKWDPRDVELMEKGDALLQAYSGKY VIESFNPAAVNWYKENRPEVCRGQLSWWPYGEDKPTDPVALGKEYAAGALVFDWISRPDF VAYDWKGGNSPQVKLARFMGAVPVSWTVRSRDEYAQCCDQFDRHIFEAFVPDEQ >gi|148337405|gb|DS264454.1| GENE 244 263043 - 263684 937 213 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 3 210 4 207 209 204 50.0 1e-52 MDIHVLNHPLVDHKLTVLRDKNTPSSTFRELVSELVMLEAYEATRDIEVVDKPIETPVAP MIGKHIAAPAPIIVPVLRAGLGMLDGMTKMIPSAEVGFLGMKRDEENPTQQITYANRLPE DLTGRQCFLIDPMLATGGTLVAATHYLAERGAKDITAVCILGAPEGLKFVEENLDPSIKF KLVLCAVDEKLNDKCYIVPGLGDAGDRLYGVID >gi|148337405|gb|DS264454.1| GENE 245 264039 - 264815 880 258 aa, chain - ## HITS:1 COG:no KEGG:BAD_0125 NR:ns ## KEGG: BAD_0125 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 258 1 258 258 438 98.0 1e-121 MHYGSGSVVPSRSAGFTNTGSPRPARPGQLDQMMADNIAGGADPAEINEMCHASAAALLD RVHHTQDAELVERVLTLVDREGVDVIAELWSHADPDSLPGILWRLYLLRTWMRKNRESIA RLWRVGEPVATTASAIAGVDQAPTEDDIARTADSILAGAFTGDFAVALERAAAFTDVVAL GLRIEARKLASLGGSSEAGSSDVSDGSAASAAAGSHPSAVEKRARAKAAKLMHTAGNLFA TAKDFRHGANLWRRGRLE >gi|148337405|gb|DS264454.1| GENE 246 264817 - 265905 1012 362 aa, chain - ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 2 182 56 193 194 86 33.0 7e-17 MSEKMRRIVEAAGGIVWRWKAGSDIANDPAIASSKSAQEQLDSIEVCIVHRPKYDDWSWP KGKLEQNETHRHAAVREIGEETGSPVKLGPYLCEVEYPLSEEGKKTRHSHDCTADTKHTL YWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILSHSTDKDTLAVFVDR VQEGGATAQNLLIVRHAKAESRKSWKGTDANRPITPKGAAMAFALNRELACFNPTRLATS PWLRCQETLQVLSWQTERPMEHINALTEDAFAEHPAVSWLAFREQITQTLNSRETTAICM HRPVIGGMYDHLRGLCARKQLAKQLIAKSPYMPTGTAMSLFIIDTPQGPSIIDIQKVSPI VY >gi|148337405|gb|DS264454.1| GENE 247 266013 - 268247 2857 744 aa, chain - ## HITS:1 COG:Rv2984 KEGG:ns NR:ns ## COG: Rv2984 COG0855 # Protein_GI_number: 15610121 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Mycobacterium tuberculosis H37Rv # 37 741 46 742 742 747 55.0 0 MAQIFDAPSKAILRSQIAEHIAETDKNDKRELQAGEEPLPNDRFFDRELSWLKFNKRVLE LAQDEDLPVIERASFAAIFANNLDEFFMVRVAGLKRRIDTGIAVTAASGLSPRQQLRAIS EQAHRLQDEHAHYIIDHILPDLAKEQIVLLSWDKLTAAEQERLSRYYRQQVFPVLTPLAV DPAHPFPYISGGSLNLAVLVENPASGKSHFARVKVPGNLNRLVPVDDLTEDESTNVRYGF ITMENLIIAHLESLFPGMIIKEARSFRVTRNEDIDVEEDDAENLLNAMEKELLRRRFGPP IRLEISDETSPFLSQLLADQLRVSADEVYRLPAPLDATVLFELGGIDRPDLKYRPFIPTT NRQIAEVESSRAQDIFAAIRERDILLHHPYDSFSTSVQAFLAQAAADPKVLAIKQTLYRT SSNSPIIDALIDAAHAGKQVLALVEIKARFDEDANIAWARKLERAGVHVVYGIVGLKTHC KLSLVVRQEADGLRRYCHVGTGNYNPKTARIYTDLGLLTCDPVVGQDMTRLFNQLSGYAP KSSFHRLLVAPRTVRSGLIQRIRREEDAARAGKEAWIKIKVNSIVDEKTIDALYRASQAG VKIDIVERGICALKPGVPGLSENIRVRSILGRFLEHSRIYAFANSDGPQIGEGPAAGPEV WIGSADLMHRNLDRRVEALVRIVAPEQIDELIKYVDLQMADSTASWHMQADGTYVRHCKD EEGRPLVDSQEYLIKKHTRRPVRH >gi|148337405|gb|DS264454.1| GENE 248 268312 - 268878 -26 188 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486510|ref|ZP_02027917.1| ## NR: gi|154486510|ref|ZP_02027917.1| hypothetical protein BIFADO_00325 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00325 [Bifidobacterium adolescentis L2-32] # 144 188 1 45 45 84 97.0 3e-15 MKKLHRSYRRLKNETAHGFKPKRHLWSENVGYPHPRRVIHTYPHRNAIRHIARHYATQHG AAQQKRKTRRSGPSCKNLRSRIAAQQHRRNGKSIQCPFNVTTYLGHTHLVGLCSSVVLVL RNYARHCGKCKPKRDDVPYLSQLLLSDRKNRKNAPCCANRNACLFIHVHLPRKNGVSEAY FTNSANEC >gi|148337405|gb|DS264454.1| GENE 249 269139 - 269930 646 263 aa, chain + ## HITS:1 COG:no KEGG:BAD_0128 NR:ns ## KEGG: BAD_0128 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 263 12 274 274 452 97.0 1e-126 MKPVEAQPEPAPLNVVVVGSAVAGVGASTLAALLARELTERGCKSVLVDADLNGGGLDVL LGVEDEDGSRFGDISAPLGKVDGKALLRELPVWDGVPLLACNPWRSENPQSWEIQACIRA LAQVKDAVIVDAGQWRGLDDVPELAQATHITVVEMTVLGLARAKVSMKSRGTAERQKHGH IVGVEPRGVARGRGVTTLEETENYLGRSLAAVVKPDAKLCGELLDGLGLRRPNRQTVKAL AALTDELQESLEGKRVKHGTRTP >gi|148337405|gb|DS264454.1| GENE 250 269911 - 270903 630 330 aa, chain + ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 3 297 57 351 377 205 43.0 8e-53 MELGPLSAIASQPGVTDIAVTCDGTVWADCGQGMQEVCLLRRCFPSAQSIREFAVRLCSQ LGRRLDDACPIADASTVDGLRVHAVIAPLVPQGAAISIRLPDAVSPDLESLARNGMFPAE WLPLLAGLVSRKASVLVTGGTGAGKTTMLKAMLMRCPPNERIVTVEEVRELGMIQHANHV SLVTREANTEGAGGIGLSELICATLRMRPDRVVVGECRGGEVVDLLRALNSGHRGGMTTL HANQVEAVPARLVSLGLLAGLEPRATAALAEDAFDVVLHVERIAGRRRIAQVGRLEAVEG RLHGRLLAAWDGRTVRAGQRWDGFMSRWSA >gi|148337405|gb|DS264454.1| GENE 251 271149 - 271673 328 174 aa, chain + ## HITS:1 COG:no KEGG:BAD_0130 NR:ns ## KEGG: BAD_0130 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 174 83 256 256 314 100.0 1e-84 MPTIGAAACVAALRASVRSGATLVQAFEELQGAPFAVPELTRFRIDMAVRSRCSLQEQHK HVDQLGAELHAACTLSLQLGCEMSRCLEAVAASLKRRRLLDDLRANAFAMPQATVKLLMA LPLLTVMLGECMGAHPLRFLVEDVKGWMCLGFAGCCYAVGWYWIRRLMRQEHVR >gi|148337405|gb|DS264454.1| GENE 252 271928 - 272185 173 85 aa, chain + ## HITS:1 COG:no KEGG:BAD_0131 NR:ns ## KEGG: BAD_0131 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 85 87 171 171 142 100.0 5e-33 MPWNEAWPDDDDCAVVRDAFSSSWSSGSSPVNRLATAIEQLDWDERSRIEQSAAKLSIRL LLPTGLCMLPAFVAIGVIPAVMSFL >gi|148337405|gb|DS264454.1| GENE 253 272452 - 272739 374 95 aa, chain + ## HITS:1 COG:no KEGG:BAD_0132 NR:ns ## KEGG: BAD_0132 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 95 1 95 95 142 100.0 4e-33 MNDAMSINVDGSPGLMGRVGQKLCAAKERANKAVCLLDARMRLLTAEPEKGAVTAEYAVV LVAATAFAAVLIAIVKSDVVKTLLTGLIKKALSVG >gi|148337405|gb|DS264454.1| GENE 254 272742 - 273107 292 121 aa, chain + ## HITS:1 COG:no KEGG:BAD_0133 NR:ns ## KEGG: BAD_0133 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 121 1 121 121 163 100.0 2e-39 MLARWWRRHARDADCGTVTAEFAVVLPCVAAVAILVLCLGRASIVSMNCQDAAAAGARAM AIDAGGEAKARAAAQTIAGGGSTVSFAANANSVTVVVRCPVAADPTGVLPASVVGKATRY F >gi|148337405|gb|DS264454.1| GENE 255 273160 - 273579 301 139 aa, chain + ## HITS:1 COG:no KEGG:BAD_0134 NR:ns ## KEGG: BAD_0134 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 139 1 139 139 221 100.0 1e-56 MRGKKGTTSVKHDVKQYVRRVLHVLKGADEGSGTISGVALIAIVAAMLGAVAMAGNLLLC VHRAQNTADLASVAAAQSLRDGAADPCAAASRTTSGNGTRLESCAIEGEDAVVAVQAATQ VPFAPWVVRQSRAGPIACD >gi|148337405|gb|DS264454.1| GENE 256 273632 - 274792 1109 386 aa, chain + ## HITS:1 COG:Rv2252 KEGG:ns NR:ns ## COG: Rv2252 COG1597 # Protein_GI_number: 15609389 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Mycobacterium tuberculosis H37Rv # 21 353 9 306 309 98 27.0 2e-20 MGNLALDVKHGYRTSMSKTSHANTTVAVVCNPTSNKGKGAQVGGHVIDLLRGAGRKHGFD VIDVTGTSFDDSLANARRRGDEYDYLVAVGGDGMVALGANAVGCSGKPLGIVAIGSGNDF ARGLDLPVNRVETAVEGIVGAIVRGTHIDVDMGLVTSLPDGHAIDSTDGTDVSQSRSPID RYYAGMLSCGLDASINDRANHSHLPNGSLRYFAAVIVELTHMKSYGYHIKATLADGSVEE RDIISPLLTVANSRHIGGGIEVSPYSRFADGLLDLVWLDHVPNFRECVDAVARAYHGRLL GSHAFGWKRVRDIEITRATEGDEPPVLMADGEYVGHLPVKVLAKDSALRVLVPPAVAEAQ AADSEERVLETIKRDGRDPLTGRFLA >gi|148337405|gb|DS264454.1| GENE 257 274896 - 275492 645 198 aa, chain - ## HITS:1 COG:no KEGG:BAD_0136 NR:ns ## KEGG: BAD_0136 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 198 15 212 212 377 100.0 1e-103 MTGKPEASTSTIGDARRLQIVQAAREICLEKGFSKITISDIAERVGMTRSLFYHYFQDKD QVADAVLDDVISEVIARLEEWNEHREAGNISKALDDVVRLTRSLIADEGPFSQRLIEDGN AALYLRFIDRAADRISEYLCGSTVREFEEKHGMPIRNEHETFYTLIVGLISLIRLHPDID DDIVRQVAAQTLHLDEYL >gi|148337405|gb|DS264454.1| GENE 258 275758 - 278202 2278 814 aa, chain + ## HITS:1 COG:MT3824 KEGG:ns NR:ns ## COG: MT3824 COG2812 # Protein_GI_number: 15843342 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium tuberculosis CDC1551 # 3 364 1 361 578 376 58.0 1e-104 MALALYRRYRPDTFDGVIGQDQVTVPLMRALDENKLTHAYLFSGPRGCGKTSSARILARC VNCAKGPTSHPCGECASCRDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR YKIFILDEAHMVTPQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP QEVMGPYLEQICADEHIEAEAGVLRLAMRAGGGSVRDTLSVLDQLMVGAVDGKIPYDSAV ALLGFTPDALIGEAIDAVADKNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLG GERAESVLSDDTATENMDDLHRQAASLGLAALTQMADTINATLANMTGAISPRMRLELLA ARLLAGRETGVVAQAAAPSSGMPEAGHAGGAAASESQRPSGSRRYAAQSARGRHAVEPSA APTNPADAVVSGAASVLAEVQQAMGGPLSEGSEPAASAESKPVETQSAPSKLSNAEASAP TQSVAQSAPQPAATDDRTPDQKWDAIVAGLPEDVRRYVDREKVPRVLLDGAKGRLWIKFD KSLSKYAFAKAVAKEAVDGTTNVVQIVRGEVHKVFGPDVTLAPAKKLADGSTAVPWSKLS PEEQSKINAQLVQEQLKAATLLTANLGKEVAKEPEDDDPWNTPIPQTPIAEGNANDVQPP EHHVKHVDVPDVSDDVDPWATPLPTPQTDDQEQGQPNGPEQPRQNQPEQHSERHSARQSA REMQSQQAQQPASSPAGFADDPWGAPMPVQAGPPEPEVAPEDDEYSMSDESIGASNALDM NDLNRVFEVKKVEEFSSDDPHNPRNMQVKKTLDD >gi|148337405|gb|DS264454.1| GENE 259 278319 - 278921 838 200 aa, chain + ## HITS:1 COG:SA0438 KEGG:ns NR:ns ## COG: SA0438 COG0353 # Protein_GI_number: 15926157 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Staphylococcus aureus N315 # 3 197 1 195 198 226 53.0 3e-59 MALAYDGAIQRLIDAFANLPGIGPKGAQRIAFYLLNAPDEESQALIDAITEVKEKVRFCD ICGNVCETSPCPVCVDPRRDHSVICVVEEPKDVMSIERTREYRGMYHVLGGVINPMANVQ PSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLSQLLSQTDIKVTRLASGLPVGG DLEYADEITLGRALAGRRAV >gi|148337405|gb|DS264454.1| GENE 260 279041 - 279802 871 253 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 241 1 242 421 281 64.0 1e-75 MALIVQKFGGSSVADPESIKRVARRIIETKNAGNDVAVVVSAMGDTTDDLIDQALSIDSN PPAREMDMLMTAGERISMSLLAMAIHAAGSHAYSFTGSQAGFMTDAQFGTAHIKAVKPDR VRRALDKGSVAIVAGFQGVNEGGDATTLGRGGSDTSAVALAVALDADICEIYTDVDGVFT ADPRIVPTARRIPVIDYESMLEMSSCGSKVLALRCVEYAQRFGMPLHVRSSFSHRRGTLI VPEGVDPRTLPNI >gi|148337405|gb|DS264454.1| GENE 261 279895 - 280461 1000 188 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 15 188 247 421 421 137 44.0 9e-33 MSENNNQSMGDLFPDLGPEVPIISGVAHDSTESLATVRRVPNEPGMAAKVFTMLAEAGVN VDMIVQASASTGTADISFTVPGTAAAKVQEVLQEKQGELGFQSFDVDPNVGKVAVVGVGM KTHSGLAAKFFNALSDKGVNVLMISTSEIRIAALVPLEQLNDAVKALHTAYGLDADQVEA VVYGGTGR >gi|148337405|gb|DS264454.1| GENE 262 280677 - 281771 1502 364 aa, chain - ## HITS:1 COG:CAC0022 KEGG:ns NR:ns ## COG: CAC0022 COG0136 # Protein_GI_number: 15893320 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 4 364 3 360 360 436 56.0 1e-122 MSEKIKVGILGATGMVGQRFVTLLENHPWFELVTLAASAHSAGKTYEEAIGSRWKMETPM PEFVKHMVVKNVADVEDVVKDVDFVFSAVNMPKDEIRAIEEEYAKTETPVVSNNSAHRWT PDVPMVVPEINPEHYEVIEHQKKRLGTTHGFIAVKPNCSIQAYTPALAAWKEFEPHEVIV STYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDEAKGEIVPFDGPLR ITSQCIRVPVLNGHTATVFINFGKNPTKDELIDRLVNYTSKAAELGLPHAPKHFIQYLTE DDRPQVLKDVDYEGGMGVSIGRLREDSIFDWKFVGLAHNTLRGAAGGALESAEMLKALGY ITKK >gi|148337405|gb|DS264454.1| GENE 263 281969 - 282601 505 210 aa, chain + ## HITS:1 COG:no KEGG:BAD_0142 NR:ns ## KEGG: BAD_0142 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 210 4 213 213 406 97.0 1e-112 MSKASEEAQKQLDRIVALGYPDVADMSAAAFRSLARPLIRALEDCGDEAGLGTQILLVPT RELVSPESLIARTSINRMAGFTTMPPRDIASFLPQDGFEPPEGPFYLVIEPHTGTCYINR EPDVARKLIDSDERLPLTLEEGLAIATQHPEWLLEKNGFNLLGSRSTDGRVPSIWMSQNA PRLGAVWPNSRHTWLGNAYCMARRGVSLFR >gi|148337405|gb|DS264454.1| GENE 264 282670 - 285213 1960 847 aa, chain + ## HITS:1 COG:no KEGG:BAD_0143 NR:ns ## KEGG: BAD_0143 # Name: pknB # Def: serine_threonine protein kinase # Organism: B.adolescentis # Pathway: not_defined # 1 847 1 847 847 1468 97.0 0 MFCTQCGSKNAPESKFCTNCGNPLVSVPVQPDAGQARISDDFSVDSTAVETPASQLAPQS AEQPEEQSAAQHEERPAEQLASQPADAIPPVPLPGGGTLPVAQPATSAASQSVPSAPETP EPKSDGTARAASPNRKLIIGIAVAAVLLVAAVVAGIVTYNMELWGGKSLPDVAVASPKDS SKTPDAKVVVRQLEGKGLKVKRVKEFSGVKSGKFLGYQGIQSGGRVRAGSVVTVRESAGP GVPEGTVGKKAESVVTTFSQMGVPVHYKQVIVSDTSKTTEGSVISTYPAQGQGVKDGKKG IYIGVATKSDDGLPSDIVGQEISDVKSSLESKGYDVKVEKRLSSKQYIGKVSGSEPGPGS QLNEGQTITLYQGVDAKGAKQTFIDHSGTGGDGLLMGTSDVASGQWCNKAGDCITLGQDD SYSSGDIVFLKVKDGAANTKYSMTGESLISCDAVQQSYCSSKKADYLLTGNSGAFELFPH KAFETYWCGDSALGGEGDMRSCVAGKVHDIDSDSSDASDYEPDGSGKFHMMDLFAVFPVG SDVESVEKTGYFDASALAAAQKQKPVDTDRPFLMYRDVNQYKNGEKESTYTRDWFDPFMP YNGYNGSKDDTVKMKPAPSDETAYYLVEDVQPDWDSLEDANIKGVSAKSQKANGKNASKN ADTKKSDSQSDAATRSLMKSIAGKYGFASGSGGWGATMTVASDGTFSGTYHDSDMGITGD DYPNGSVTISNFKGRFKDAKKNADGSYTMQCDKSALKIDGNIGDTYIKNGSKYTVADPYG IAPCGAFTVYPAGYDSSQLSEAIVGWSHAWYDSMPAKLETPIIVNAEDTNLGSESQQDAF FQSKYLE >gi|148337405|gb|DS264454.1| GENE 265 285290 - 286813 1225 507 aa, chain - ## HITS:1 COG:no KEGG:BAD_0144 NR:ns ## KEGG: BAD_0144 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 507 1 507 507 1033 99.0 0 MSLRFNSDGTFRVLQMADIQDGPDVREDTIRLIEAAIRKAHPDLIVLTGDQIRGYDPAYI DTFLRRRGEQPGTHVRAVTEIEAKIRGIKRHPIAKTLTKSQPSDERWMIDGIGTDSPKLV KSAGRNGSASKLESWAEAINRVTAASLLDETRQKVRDTFAAFLGPALESHIPFAATYGNH DFQCGILADEQDDLYREFAGCMNPVAGSSPLALEPGTFALPIEASDGSGRITMSVMMVNS GDYADTADAGDGNGRQSVTEYAKYAANSRGWDLADSDGYGTPSPEAVEWLKRVQRELGRR NGDGQAVPAIAFQHIPPQEFYDCLHEVPAYTPNAVEGAREFAGHCYVLDRDVCRPGSRLG EAIGCADVNVGEVDALREAGGYFALFCGHDHKNSFVGHVHDIDLGYAPTCGFECYGPKSR FRGIRLFEFREDNPMAYVTRMLTWGDLVGRYSSNELRVFFEDHCVTDLIGVRNELRRPQV SATLLGAGAVTCGAIGYAVRGLLRKSQ >gi|148337405|gb|DS264454.1| GENE 266 287015 - 288925 2691 636 aa, chain + ## HITS:1 COG:Cgl0250 KEGG:ns NR:ns ## COG: Cgl0250 COG0119 # Protein_GI_number: 19551500 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Corynebacterium glutamicum # 37 634 31 603 616 645 53.0 0 MGQDQSSVFDLAAVAAASNGGNNDPLLPPARYIGAPQKPSKMPYNKYVAYDKQVPFDFPE RTWPGKRLQRAPRWCSVDLRDGNQALVNPMDSERKLRFWNLLVSMGFKEIEVGFPSASET DYDFIRMLIERELIPDDVTIVVLTQAREHLIRKTYECLKGAKRAVVHFYNSVSVLQREVV FRKDKAGIKKLATDAATLCKELEGEAKGIDLYYEYSPESFTGTEPEYAVEVCNAVIDVIK PTPEHPMIINLPATVEMTTPNVFADEVEYVSNHLVPRDAVVLSLHPHNDEGMGVAATELA VLAGADRVEGCLLGNGERTGNVDLVTLGLNFLTQGIDPQIDYSNVPEIRKTVEYCNQIKI SERHPYAGNFVFTAFSGSHQDAIKKGLEARQVAADRAGADLDSFVWLVPYLPIDPKDIGR SYEAIIRVNSQSGKGGMAYLLKTNHNLDLPKRLQVEFEKVVQNYADETKKEVKDEDIWRL FKDEYLPVEESGATAAGVVVGDSKDETLKQWGRLKLLKVSVSSGEDGSDTVLKARILDRG VNVGVDEPVEREVSGIGNGPIAAFLNAVSNFGIEASVMDYVEHTMSVGTDAMAASYVECQ IGEEDNTSIVWGVGIDTSIVTSSLKAIISAINRSER >gi|148337405|gb|DS264454.1| GENE 267 289183 - 291297 2081 704 aa, chain + ## HITS:1 COG:CAC1529 KEGG:ns NR:ns ## COG: CAC1529 COG3940 # Protein_GI_number: 15894807 # Func_class: R General function prediction only # Function: Predicted beta-xylosidase # Organism: Clostridium acetobutylicum # 339 688 9 320 327 92 25.0 4e-18 MSANYSLLCYTREATGRKEANNEDIAYSMHLALRSGDDAEWQPLNENYGIFFAAGVPIAA ATAESRRACTAAAHFAADPFDAPRPATDAVAHGVVMPGMDITLKSLKNPFLFRLADGRFA IAATRTARGGEPDGSERSAFLLAISDDLTAFDQRGLVLLRTTGGVNRPSVSFDAADACYV VSWTGDDGKARTARTADIVAAAGSGRPLDVVESASSQPLRQTGDCGIPNAVVGNSIAISE PEAERLIERFGRIRNTGTSVPAQRIDAGLHGEDARNAVLALAATRAELSYSDGSQATRAV DWNMAQLEAIGQEASEGTFKAGQTRTVEGVIRQSVYPVPFAVERADPSVFAWDFNGKPMF MFIATDDTDGNCVDPNDGRTHMPLRIADSIEALSDAAGGRAKEIDLLACGDLNSEDRPMT GCFWAPELHVIGGKLSVLFMPCFDGPRVNPDGTPNDRAGKPDMWTGSCHIMQLKQHSDGT DFDPREPENWTVPEPILDPDGETLNPIQRISLDMTVLCDSGRWYYAWQQVGSIWIASFDP ARPARLTSKPKQIVVPEFAWDNMIAEGPNAIVHDGTIFLIYSGSLVGIDYTTGLVTAPAG QGADLTDASVWTKLDYPLQKSGMYNGRWQLGTGHGMWSHDEDGNLIYVFHNAEYEHGRYG GRDAQVRRVHWSKEGMPILDMQTAEELDPDYAGVTMEVGFFDAD >gi|148337405|gb|DS264454.1| GENE 268 291325 - 292398 1122 357 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 13 301 6 292 333 169 34.0 8e-42 MPKRTGGNGEHVVTMREVAKAAGVSIKTVSNVVNDYEFVSQATRDKVNKAIVELGYTVNV SARNLRRGQTGIIGLAIPDLQMPYFAQLSSLVIEEAKKVGLRVIVEPTQYSRDGELEALH GSQQTMIDGLIYSPLELGQDDVERLKVDYPLVLVGERIFTDQVDHIATENVEGAKRATQY LLTTGCRRVAVVGVHPGEKVGSAALRYQGYLEALEEAGVEFDDRLVVESGMWHRSDGVRA MNALLDSGVKVDGVVALNDMLASGVMHAIQMHGLHIPDDISVVGFDNSDDSQYLSPALTS IAPGLEAVARLSVKVLKERIDGRDPNADRPGEKVFRKVTSSLVVRQSTKLPADSLVL >gi|148337405|gb|DS264454.1| GENE 269 292738 - 293757 770 339 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|90020424|ref|YP_526251.1| ribosomal protein L11 methyltransferase [Saccharophagus degradans 2-40] # 6 310 5 310 314 301 49 6e-80 MVVYNNPIVLQRADPWVLKVDGEYYFTASDPEYNCIAIRHASSINDLQKAPETVVWRKHE SGPASIYIWAPELHRINGAWYIYFAGAATDFEASGLPTHRMFVLENTDDDPTSDNWVEKG QIITPIDSFALDATTEVIDGVQYLVWAQKDPAIEGNSNLYIAKMANPWTLGSEPVMLTKP EYDWECIDFLVNEGPAFLFHENKIYITYSASGTGVPYAVGLLTAERGSDLLDKASWTKSP VPVFKTCAENGQYGPGHNSFTKSEDGTEDLMIYHCRNYTEIKGDPLFDPNRHARVGVVKW TADGPDFGVPEPDNLWTPTTADVLPADGGPLAGTPAVGH >gi|148337405|gb|DS264454.1| GENE 270 293867 - 294097 59 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSPEEAPQPPAASTSPSDAHTATAALAKRRNPVRCLDVDIVSFLFLNGPSLDRSSLQSE WEESFSIEPPCSFATL >gi|148337405|gb|DS264454.1| GENE 271 293976 - 295247 1896 423 aa, chain + ## HITS:1 COG:mll3590 KEGG:ns NR:ns ## COG: mll3590 COG1653 # Protein_GI_number: 13473099 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Mesorhizobium loti # 27 367 5 365 418 82 26.0 2e-15 MSTSRHLTGLRRFAKAAVAVCASLGLVLAAGGCGASSGESKTIYFWNNLVGDDGPAMQRI VKEYNAQSDYKVVFQPMNGGDLTTKIYSVMQTGKNIPDIIIGDQFQTAVLQSQGLLDTMD DWQKVAPDLKESSFLPATWKGVTVNGKAYGIPLYLYQMAIYYNKDLVKKYNLQYILDDGF VTIDEIKDLKGKLPKGTYALTYGNLPWAFMSLLYGAGGTLENDMDDLTKDVWRKPMEKLK EAYDAGVIAPMDVDGEQAFGSGKAVFAQLGTWAQGNMSNTLGADKIAEANTLQYSADNPV NFFYQCNWMQLKDPHRSAAKSAAAADFVKYVYEHWMDWSEVGSISPAYRDLNNPEYQKLI QASFTNSKKERDYIKTSNYLYGGYATAGWGTYNDIVYGNVGLEEGLKTLDLMAQGQIEIQ EES >gi|148337405|gb|DS264454.1| GENE 272 295247 - 296161 1288 304 aa, chain + ## HITS:1 COG:BH1865 KEGG:ns NR:ns ## COG: BH1865 COG1175 # Protein_GI_number: 15614428 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus halodurans # 3 286 10 289 309 141 31.0 2e-33 MSKTSTIGSAKSSMKRKNSIWHALPYIAPHFIIFAVFGIIPIIFGIGLAFTRWNMVGAPK FVGLQNFAKIFDPSTYFYSIFWRDLGHTLLFVLVSVPLTIIVPLLLAVALSKKGLKGAGL FQAIFYIPGLISIAAGALVWRMVFNSQFGLLNTTFHTDINWLGKNPYAWITIFVLVLWAG IGGNLVIYRSALSGVDESLYEAAKVDGAGPVRIFFSITLPEIKLPLFYTTIMTTTGAFNV WGQPVMLTNGGPNYQTQVLLMDIRNLAFPAGPAAAGMASAMALLLGIILMAIAAIQLIFM NKED >gi|148337405|gb|DS264454.1| GENE 273 296164 - 297060 1497 298 aa, chain + ## HITS:1 COG:lin0761 KEGG:ns NR:ns ## COG: lin0761 COG0395 # Protein_GI_number: 16799835 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Listeria innocua # 18 295 5 290 291 173 35.0 4e-43 MSAATTVNVASAAIPENKTKKVSPSLIAVYVVLVVLAVVWLLPVIYTVTTSFKSVAEFTS NAFNFLPAKWVLDNYMTLIEASASYPVLNWLGNSLIISTVFAVLSVCIVALAGFGYSRLN FKYRDTLFFVLLLISMFPAVVNMIPQYRIIASLGWVNTYWACIIPGLGNVANIFLVRNFM KGIPKELDEAAEIDGATDFQIFTRIMLPAIRPILIVIFLFSFTGAWNDFLWPTLVFNDIN KMPVTAGLQLLSNQMGQYNQMGSLMAATCMAIIPTLLLFLFAQKYFLQSLNITSGLKG >gi|148337405|gb|DS264454.1| GENE 274 297050 - 297250 105 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVISTRSALRANGAGGCMVLPCGFISVLSVVWPHPMCDAQLGKDKITGPSVWGRTCALSH SAGISP >gi|148337405|gb|DS264454.1| GENE 275 297177 - 297650 619 157 aa, chain + ## HITS:1 COG:no KEGG:MPTP_0104 NR:ns ## KEGG: MPTP_0104 # Name: not_defined # Def: hypothetical protein # Organism: M.plutonius # Pathway: not_defined # 14 148 1 135 144 67 33.0 2e-10 MNPQGNTMQPPAPLARKAERVLMTIAAAYNVIMASITLFMFTSWFKGQAYDLLEHNGLLK TDYSAVDNASTVVGIYALLVLIIGIVSFIMSMRCLAPGTTSRWVIIWLAIVVVFSLGTMD LIGLALYSITLVIYLARNKAIAAQQDVIRTWARTHQG >gi|148337405|gb|DS264454.1| GENE 276 297783 - 298847 1144 354 aa, chain + ## HITS:1 COG:no KEGG:BDP_0243 NR:ns ## KEGG: BDP_0243 # Name: not_defined # Def: endo-1,4-beta-xylanase # Organism: B.dentium # Pathway: not_defined # 1 347 1 347 358 605 86.0 1e-172 MTDTTDDYGYLLVHFIEDPDGYAEKIYMDISDGDNPHRWVPLNDGKPVLASHLGTTGVRD PHIIRNPDTGTWYIIATDLRVFGGDGGGWYEWSHHASTNLIIWESDDLLHWSEPRMLDVS RKPDGSHLELGMAWACECLWVPDYYPQGHHGGRGAFVMYWSSTVFNDADKAHDDKNVYCT VLWGATTDFTQDTFEYGGVFIDNHGDAIDTTMIQRPLPDGGVRTYRITKDNAHGTGIWMD RTDAKRWWEPGTVWTKVQDRIGAGYVPDGNPGGVEGPAVFANHHNNGGPDDEWYLFVDVI PSIGYRPMVSRDLDQGWMPLQADDYFLTAHTKHGGVASLTRAEYDRLAQHVHAF >gi|148337405|gb|DS264454.1| GENE 277 298972 - 301170 2965 732 aa, chain - ## HITS:1 COG:ML2688 KEGG:ns NR:ns ## COG: ML2688 COG0744 # Protein_GI_number: 15828452 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Mycobacterium leprae # 46 642 42 656 708 273 35.0 1e-72 MLSKPPQGPKHTSHRAPKKTRKHKHLVLKWVLGIFAALIAADIGLFAYMYTTTEIPQPEK FALAEKTTVYYNDGTTPIGSYAEQNREIISCADLPDYVGNAIVASEDRSFYTNKGIDPIG IARAFYNNLTTGSRQGGSTITQQYAERYYLGETTSYVGKLREAFLAVKIAQAQDKSQVLC NYMNTIYLGRGAYGIQAAAKAYFGKDAKDLTLSEAAMLAGIIPAPSVWTPDVNPKQAEKR YKRVLNIMDEDGYITPDEKKAAKFPQTIEIQQNNQMSGPNGYLLTMVQNELVNTKAFSKQ DLETGGYKIVTTIDKSKQDLMFSTISPSQNGMQGIVPDGMQFGALSVNPKDGSIISLYAG DDYLTKQLNNVTQATYEVGSTMKPFALLAAVNEGVSLNTYFNGNSYRTFPGITETVSNYG GENLGYVNLYTATEQSSNTVYMDLQTKLGAQKIAETARQAGVDDSSLDGSNPFTVLGNNG LTLKDMTQGYATLANQGNKPTLHIVAQVQTANGTDLYNAPTSAEQTFEANNANLVTKALT GVVQRGTATEARATGHTIAGKSGTANDSNAASFIGYTPSMLTSVAMWYPDDNGNPQEIPA FGSWTGGSDYPVHLFTEYMKQALADTPNETFPDATDNGKVGGPDGTWGTGAQKTWTRKQQ TTVTPRTEENTQQTTPNQTEETQNTGQGGGDGGNSGGIPANGDGNDTNGGNGGGTSGDNS GNNGANGDTSQQ >gi|148337405|gb|DS264454.1| GENE 278 301499 - 302641 1057 380 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163782670|ref|ZP_02177667.1| 50S ribosomal protein L20 [Hydrogenivirga sp. 128-5-R1-1] # 3 357 5 367 368 411 56 1e-113 MSIRVAIAGVGNCASSLVQGVEYYKDTKDEDKIPGLMHNNFGGYRVRDIEFVTAFDVDAL KVGKDLSEAIGASQNNTIKFADVPNLGVEVLRGPTNDGLGEYYRQMITESDAEPVDVAQV LRDKKVDVLVSYLPVGSEKADKAYAQAAMDAGCAFVNCLPVFIASDPEWAQKFRDAGVPI VGDDIKSQVGATITHRVLARLFEDRGVRLDRTYQLNVGGNMDFMNMLQRSRLESKKISKT RAVTSVVPHEMDPHNVHIGPSDYVAWLDDRKFAFVRLEGTTFGDVPLNLEYKLEVWDSPN SAGIVIDAVRAAKIALDRHLAGPVLAPSSYFMKSPAVQHEDGEARRLVEEFIKGEVEGTE EQLDADVAAAKAAGKDVWRA >gi|148337405|gb|DS264454.1| GENE 279 302868 - 304046 1503 392 aa, chain - ## HITS:1 COG:ML0092 KEGG:ns NR:ns ## COG: ML0092 COG0562 # Protein_GI_number: 15826927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Mycobacterium leprae # 9 391 6 386 413 442 57.0 1e-124 MTDAVEYPDLVVVGAGLFGLTVAQQAVEHLGVRVEIIDVRDHIGGNAYSYMDEETGAEIH KYGAHLFHTSNKRVWDYVNRFTSFTDYVHRVYATHDGEVYPLPINLGTINQFFHAHYTPA EAKALVESQAGELAGTDPKNLNDKGISLIGRPLYEAFIKNYTGKQWQTDPKDLPAGIINR LPVRFNYDNRYFRDTWEGLPTDGYTAWMERMIDDPRIHVTLRTDFFDESQPYNRKALAAA GVPVVYTGPVDRYFDYSLGELKWRTVDFREVRYDEGDHFGCPVMNFSDPDVPYTRAIEFK NFNPERRASQNPDKTVVWEEYSRFAERGDEPYYPINTEADKALYARYEELAKAEPLTVFG GRLGTYKYYDMHNVIDTALTAYEQQVEPLLKK >gi|148337405|gb|DS264454.1| GENE 280 303921 - 304304 159 127 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486546|ref|ZP_02027953.1| ## NR: gi|154486546|ref|ZP_02027953.1| hypothetical protein BIFADO_00361 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00361 [Bifidobacterium adolescentis L2-32] # 52 127 1 76 76 145 100.0 8e-34 MVAHVDDLDPHAQVLDGLLGHGQAEQARAHDHQIGILHRISHKKTTFQTLSMLIAATQTH RGGVRFLLKCTRASSRCGEVRAWCNMARASAWRYVTQLPQGRNAARVSGLFRVRGGFSIS SPIRSPQ >gi|148337405|gb|DS264454.1| GENE 281 304444 - 305421 1112 325 aa, chain + ## HITS:1 COG:no KEGG:BAD_0160 NR:ns ## KEGG: BAD_0160 # Name: not_defined # Def: pre-pilin peptidase # Organism: B.adolescentis # Pathway: not_defined # 1 325 39 363 363 536 99.0 1e-151 MREVEAVLSPQDVNKGLAQVDPLTRHPRVSSIVLCVVFGLLMLAASAGVWWLGVRTMDGQ SYEDIVWSKFDAALPGWLAPVVHVFAISAVVITVSVIMGAIAFAVLIVRKRWLSIAQLAV FGGLCFAAAELLKPLLPRPYLINLESNPNNSAPSGHVILAAAASVMLLCAVPRVLRALVA VIGWAYTVLVGLSVIAAQWHRPTDVIMALLIVGGLALLALATTFASGMDEPGTRVSSASV QIVGSVMLTIGVLGILYGAYIIWQIQPGLAMSAEWTNAGAYVSTALLTAAVSALVLGITL AMRQLTASPLTKLGLVGAPPAPPKR >gi|148337405|gb|DS264454.1| GENE 282 305533 - 308610 3738 1025 aa, chain + ## HITS:1 COG:ML0200_1 KEGG:ns NR:ns ## COG: ML0200_1 COG0550 # Protein_GI_number: 15827005 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Mycobacterium leprae # 6 616 17 608 608 585 53.0 1e-166 MATGSKLVIVESPTKAKKIGGYLGSGYTVMASVGHIRDLAQPSQVPAAEKAKYGKFGVDI EDGFKPYYIVDGNKKKTVADLKSALKKADTLYLATDEDREGEAIAWHLVQTLKPKVPVKR MVFHEITPEAIKASLNNTRDVDAAMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRV QSVATRLIVERERERMAFVRAPYWDVAATLEAPDADGNNVAFDSRMVSLGGRRLAGSKDF GDDGQLTAAGVKDNVVQLDETHANAIARSLEYATFTVSSMETKPYRRRPVPPFTTSTLQQ TAGNRLGMSSRQTMRAAQGLYENGFITYMRTDSVTLSQEAIAAAREAVSRHFGEKYLSDA PKQYATKTAGAQEAHECIRPAGAHFRDPAEIATKVPADQLKLYTLIWQRTLACQMADATG STATVRLSAPTESDGEAMFQASGTVIEFPGFMKATGEGRRSVADAKKSAEAAGVKIGDKA EKSAKASKKIDDNVSLPPMQPGDELAAVDVAADGHETQPPARYTEASLVKTLEQKEIGRP STYASIISTIIDRGYVYERGRALIPSWLAFSVTKLLETKFPKYVDYEFTADMETGLDQIA GGHETGKAWLTRFYFGSGDGAAQSADEAHEGLQQQVAQLGEIDAREINTIDIGDGLHVRV GRYGPYLEDMKHLDAEGNPKRASLPDTLAPDELTVEVGHDLIENHSGGPRELGKDPASGG TVEVRNGRFGPYVALVMPSAEDAGDTAAESAAGKAGKTKRSGGKKAASDRPKMASLFKTM SPESLTLEDALKLLSLPREVGSYDEANAETGEMQTVTVMANNGRYGPYLTKTGADGKSDT RSLASEDEIFTVDLEKAKELFAQPKYGRGRGRGAAKPPLRDLGTDPETQKHVTIKDGFYG AYITDGETNRTLPKQYAPESIEPAEAFRLLAEKRAQGPSKRRGRKTAAKGAKKGAAKGAK SAKKVSATEQARADRRAKVRELADKGWANTRIAKEIGSTASTVKADVDWLTANEGYARPE VVPAR >gi|148337405|gb|DS264454.1| GENE 283 308732 - 309385 586 217 aa, chain + ## HITS:1 COG:DR0111 KEGG:ns NR:ns ## COG: DR0111 COG0125 # Protein_GI_number: 15805151 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Deinococcus radiodurans # 2 204 3 199 206 155 47.0 5e-38 MQGTFISFEGVDGVGKTTQVERLRAYVESQGRECVVTREPGGTALGVAIRKMLLHGVDTG DENDCADIAPRTEALLFAADRAQHVAEVILPALQRGAVVITDRYLDSSLAYQAGGRELTA AEIRNLSMWATNGLLPERTYLLDMDPAQSHARLQHAEDRMEAAGNDFQRRTRVAFLDLAE REPERFHVIDASQSIEDVWARIKADFDTVSTADGGIA >gi|148337405|gb|DS264454.1| GENE 284 309382 - 310530 1297 382 aa, chain + ## HITS:1 COG:MT3747 KEGG:ns NR:ns ## COG: MT3747 COG0470 # Protein_GI_number: 15843256 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis CDC1551 # 3 322 7 342 404 156 36.0 6e-38 MSVWNSIVGQAQVVEQLKAIASGDPKAIAQSWLICGPPGSGRSNVARAFAAALESPDHGL NDEPTKTTEQVLAGTHPDVSVLATNKVTIGIDEVRDIITTSEQMPGTAPWRIIIIEDVDR MMERTTNVLLKEIEEPSPHTIWLLCAPSAQDVLPTIRSRTRIVNLAVPSNQAVAKFLESQ GFEPNIAARAARLSEGHIGIASLYAKDERVMTDRDELIVGVLGLHRASDAVLLAGNLIDN AKAQAEAEVNVKASEAEADFRRINGLGPKDRIPPKLRGAYNAIAKKDELKRRATRLTRDV LDRALNSVASIYRDVAVLQNNAEDAVGLINLENRSAITELSVRLDRTGAVRRLEDIATAR RRLNGNGNPVLVFEALFCALIP >gi|148337405|gb|DS264454.1| GENE 285 310573 - 311628 1111 351 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 10 351 6 331 332 133 29.0 4e-31 MAGRTDSGSSITNVAATAGVSIATVSRVLSGKRGKDDDIARRVREAAKQLGYSVNYAASA LRSDVTKTIGLIIPSATEPFAAQLLDEIEPTIDTESQQLLLSIGATQEAQAERIESLANR HVDGLIVVPAAGADLAGTLNQYANTLPIVQICGRQTAPRVSVVGIDENAAMEAIVKHLAE QGIASAAYMAGNELSFESAELFATFHTHMRTYGLATSENWNQFGERTVQRGFDCAMRLFN GPLVQPEAVVCADDAIAFGVMVAFDALGIRVPEDVLVVGYHDSAIARTTMPRLTSVRAPF ERIVSECLRLLASGPAGGAAETAAAPGGSVRAPRVMLAPQLIVRDSSVFRR >gi|148337405|gb|DS264454.1| GENE 286 311564 - 311776 123 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDTPAVAATLVIELPLSVLPAMRCPFRRVRLAFAGSLSVFQNVLKGALNPCVLLGQRSGL MNRFEPRRAY >gi|148337405|gb|DS264454.1| GENE 287 311858 - 312118 516 86 aa, chain - ## HITS:1 COG:no KEGG:BDP_0253 NR:ns ## KEGG: BDP_0253 # Name: hpr # Def: HPr family phosphocarrier (EC:2.7.3.9) # Organism: B.dentium # Pathway: not_defined # 1 85 1 85 86 108 84.0 6e-23 MATRNLVINDPVGIHARPAAMFAQAVTASGQTVTIAKEGGNAVPAGSILSIMGLGIKQGD TVVINVEGDNAEAVADNLANILVNAE >gi|148337405|gb|DS264454.1| GENE 288 312462 - 314111 2520 549 aa, chain + ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 3 543 13 551 568 352 45.0 1e-96 MNIKGVGIGRGVAVGPVIRMAAPLPEPSDAPRAENISAETEIARVEKSIALVNADLNRRA EEAANGDEGAKQAAPILQAIAMFASDPSLAQSIKDLINQGKTAERAVLEGFGAVEDMFRA IGGYQAERAADLHDVGQRVIADLMGAPAPGLPVSETPFVLVAEDLSPADTAALDMSKTLA IVTSQGGPTSHTAILARARGIVAVVSAAEAAELENGTNVIVNAAKGEIVVNPSEDEIAAA EAAKSRAAAAKELRGKPGATKDGHLIPLLANVGKPSDAAKALEYGAEGVGLFRTEFLFIG NSEPPSVEEQTKAYTELLSQFPGKKVVIRMLDAGADKPLPFLTPEDEPNPALGLRGLRTL RAHMDVLEGQLKALAAADAATDANLWVMAPMVADQHEADYFVKLGKSFGLKFVGAMAEVP SIALMADKVADVADFVSIGTNDLTQYTLAADRTLGSVANYQTAWHPAVLRAIKMICDAGN AKGMPVGVCGEAAADPDLAVVLAGLGVNSLSMTPVALDDVRASLAEVTFEEAKAKAAAAL NGDFYKPAE >gi|148337405|gb|DS264454.1| GENE 289 314385 - 314942 676 185 aa, chain + ## HITS:1 COG:SA0840 KEGG:ns NR:ns ## COG: SA0840 COG1881 # Protein_GI_number: 15926569 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Staphylococcus aureus N315 # 1 184 1 169 171 114 40.0 7e-26 MKISADFTVIPDAFAKAAPPENCIDGTPIVSFPFYIDELDPSVQFLHWEFVDPDSIPVCG FQWNHWSLANLPVDALMYDFNDSHALAIPADFSRTVSAMIPETVQGRTSAASPLLKGRSS DPAVTMRYNGPYPPDQDHDYYLHVWGTTAPLNGLNQGFWLNEMERALRNSGAIADQGAIF LTGKA >gi|148337405|gb|DS264454.1| GENE 290 315051 - 316643 2236 530 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 529 9 472 472 524 52.0 1e-148 MACTTILVGKDASYDGSTIIARNEDSANGEFCPKRFIVVKPDEQPRHYKSVLSHVEVDLP GEPLQYTAVPNADLKEGIWGEAGVNEANVAMSATETLTTNERVLGADPFVELTPAKGKKG EDGYEPEVPGGIGEEDFLTLVLPYVKTAREGVTRLGALLEQYGTYEMNGVAFSDVDEIWW LETVGGHHWIAKRVPDEAYVTMPNQLGIDEFDLDDALGNQEEHMCSADLGEFIERNHLDL AVENVTPFNPRDAFGSHSDSDHVYNTPRAWYMQRFLNPYDEQWDGQDADHQPTADDIPWA RQPDRKITIEDVKYVLSSHYQGTPYDPYGKLGDQHSRHMFRPIGINRQSQLSVMQIRPYR PQVNRAVQWIAYGSNPFNTLVPFFPNVDSTPKYLEDTTTRVTSENFYWENRIIAALCDAS FADTANAVERYQEKTGGMGHRMVAATDEQIDRLVEGVVDEFDAEDEIGDVQPMEPDEIIE AVRNNEAREVLAAANETMAAQLKAETDKLLDSVLYTTSMNMKNGFHMSDF >gi|148337405|gb|DS264454.1| GENE 291 316908 - 318425 1807 505 aa, chain + ## HITS:1 COG:FN2082 KEGG:ns NR:ns ## COG: FN2082 COG2759 # Protein_GI_number: 19705372 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Fusobacterium nucleatum # 5 306 26 328 544 162 38.0 2e-39 MTSIEDFTSQYGLVQKIDAFGYLDYLKKNPDAPRKHGKVVLVTADTPLKASRGEGKTTTT IALIDALRERGIDAAAVLRQPSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMGAIE AAQNLLVSFAEKAVDDGKLDTILVPRVSEVPSRSLRQIAVDRGKGDVAERVVLTPTCELM QIVVLSRSMDEISERVAKMVAGTKDGKAVTFGEFVDLWRITGILGDAVKPAKTETVNGSP VYVHGGPFANVSIGIPTLVSVEMACALHDVVIVEAGYGTDAGAQKWLDIACREYDAQWPS AAIVVTRASTWRDDPDLAWRYPFHVQRLEGLDIPTFPLINLWDGEDDQIPALKDTAKELE FRDPIIGNLYRDGGDALAPQLDAFVDAVTNGSMPAEPHSHKGMALVENVRWVAEHAYGVP ADRVILKDGFAESLQAAEGLCASAGIDFGSLALVAVKSPATMTDNDRAPEAERTVTLKKV EVHSGAGLVHVNLTTSLTTPMPKIV >gi|148337405|gb|DS264454.1| GENE 292 318866 - 319213 521 115 aa, chain - ## HITS:1 COG:no KEGG:BAD_0170 NR:ns ## KEGG: BAD_0170 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 115 1 115 115 226 98.0 3e-58 MPVIHTHVSVSTTPGQREALKAAYGKAITAVPGKSEGWLMCPFEDNMPIYFGGDDSKPAA YVEVNVFGRSVPGSAWEKLTEQIMAALGKELGIPADRTYIRYTATTDWGWNGGNF >gi|148337405|gb|DS264454.1| GENE 293 319321 - 319857 769 178 aa, chain + ## HITS:1 COG:no KEGG:BAD_0171 NR:ns ## KEGG: BAD_0171 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 178 9 186 186 326 96.0 3e-88 MKFGIVGVIAFIIDWGILNLLVGLFHMHNVLAATISFIISLIFNYVASMKVVFKHRDDMA RWMEIVIFVVGAVIGLFMNDAIIWISTYGMNHDAYVSQSAEYLIRTNVGKLIATAVVMVW NFVTRKWLLDDTHTNATNRLKKKENRLTPEQLEAKWENSFSHKLGVWSLEHTPKGWPK >gi|148337405|gb|DS264454.1| GENE 294 319980 - 321404 1526 474 aa, chain - ## HITS:1 COG:AGl1094gl KEGG:ns NR:ns ## COG: AGl1094gl COG0477 # Protein_GI_number: 15890666 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 20 464 5 395 409 131 26.0 3e-30 MTNNVLVGVKDIGQRLFGGYAELLRIPHTARFSVGSVIACMPFPMVGMTITISVQHYYGN YSLAGALTAVQAIALAVASPVLGKLVDKFGQRQVSIPTIIVWIIAAISLVSCITARVPSW ILFCIVPFMAAIPPWGAMSRQRWTTLLKGDAEKTNRALSLSGVFDECMWVIGNPLASTLA VISGLLAFSFTGMCVVIGALMFLTELTTEPKSQTQLAREAGMTRKEYREREAARSKALQA EAAVEYARNKARAEGKTAAEVQAAMEKAEAEVKAGRKESIWGPGLIAVCVTWFGLGAFQS AAGISIVAFATEAHMKQFTGFVFACFSFSSLIGALVYGAKNWTIPLWKRFYFCLAVVNLG IGSFMFAKHLWVIMIIYLCIGVCQAPTWVNGNQLMLHLVPPTRFTEGMAWMGAMNSIGGS VGSAIAGQFIDRMGSRGGFIVVTALALTSLAIAMLGFKQIKESTEQPTLTNVSV >gi|148337405|gb|DS264454.1| GENE 295 321783 - 322442 713 219 aa, chain + ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 1 216 1 201 202 127 38.0 2e-29 MPATTIHFVRHGKVENPGHLLYERLPGFHLSDVGVRMAQATAHYIAVSPQLNTVSAVYSS PLERTRETAGEILESLNSVRGLRGEEPLELQTDERLIEARNEFRGKRIGFGEGALWKNGN WKLVRNLWKPSWGESYQSIAHRMQDFALEKVAEYPGKQIVVVSHESPIWSYRHMLETGHP EHNMLLRHTALASITSITYDCNTGKIMSITYADPAADVE >gi|148337405|gb|DS264454.1| GENE 296 322526 - 323587 1167 353 aa, chain + ## HITS:1 COG:no KEGG:BAD_0174 NR:ns ## KEGG: BAD_0174 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 353 1 353 353 656 99.0 0 MSFVYDQKVVDSMYGSHVVSMAVDYGVDLVKMWPLQTNQELENDVKYAENLQVMFSGMMT QVLLKRSEEVDQSVAEAVYEGMDVLPGVDPEIIRTLMDANRAYDVMASYHGVDGIELFME TARILGIDVETRIEKEIQDLMENLSRTMRSASGFEVDDDVAENVGICQSATVDRNEFARR YLASMTVLDALINLMCYGTDDSQEQAIRVLPVLLFVNAMRNQLSIPPTFINAEQLINLFG LRDTARQFGRPQSVFDSSFNPLTFSTTVKYLAFFAGQEWLRHMRFLEWDPKQAEQDAKDE DERKSREALAKKYNLTSDGDNAASDADLDSSADSNLSEDSDSSEEAGSEPTEE >gi|148337405|gb|DS264454.1| GENE 297 323847 - 325118 1349 423 aa, chain - ## HITS:1 COG:mlr5366 KEGG:ns NR:ns ## COG: mlr5366 COG3152 # Protein_GI_number: 13474473 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 110 198 2 79 117 70 42.0 9e-12 MTDPNQYNPQVPQPAPQYGTPDYGQAQAPQYAAPNYNQAPQYGQAPQYGQAPQPQYNQAP QYAQAPQYGQAPQYGQAPAANYGQPAPQPQSGNSFFALTAPLDMPAYGCNLGEAIVRFFK KYAVFKGRASRSEFWWWFLTYTVVTFVLRLVFRTLRDLTDSGVIATVGDSFSSIWGLVVL VPTIALGVRRLHDINMRGTVLAIIYAVQAAAGIFFAIGLILIIGSSLSFRSLEAGNSVSI GGVVLLILGVLAFIASGVFYFVLMARDSNPEGARFDAPTASNAWAPATGEAPADPYAAQA TSYGNVPLPTNPAAAAPAAPYTAPATPADSYTAPAPQYDAAQQHAAPQYAAPQQNPLAEA PSVPSMPPMPAVPTMPPTPSIPPMTEVPAQFQHPHEQPNTDAPADSDAPAVPNDPANGTD QQL >gi|148337405|gb|DS264454.1| GENE 298 325286 - 326806 2453 506 aa, chain + ## HITS:1 COG:ML1688 KEGG:ns NR:ns ## COG: ML1688 COG0008 # Protein_GI_number: 15827897 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Mycobacterium leprae # 1 503 1 496 502 564 57.0 1e-160 MTEVENTKPELPENVRVRFCPSPTGIPHVGMVRTALFNWAEARHTKGTFVFRIEDTDAQR DSEESYNQIIEALNWLGIDWDEGINVGGPDGPYRQSERGDIYKDVAAKLLEAGYAYESFS TPEEIEARNVAAGRPKAFGYDGYDRNLTEEHKAAFRAEGRKPALRIRMPDEDVAFDDLIR GRIEFKAGSVPDYVIVRPNGDPLYTLTNPVDDAMMRINVVLRGEDLLSSTPRQIVLYRYL IELGVAKEMPLFGHMPYVMGQGNKKLSKRDPESNLFLHRDNGFIREGLLNYLALLGWSIA PDRDVFSMDEMIEKFDVRDVKANPARFDIDKAISINAEHIRMLEPQDFLNRSVPYLKRDG VVSADSWDALTDREREVLTAAAPLVQPRVRLLGEVAGMVGSLLSTEGYIEPDADAKKQLK DSAPAVLDAAIAALDAVAEGDWKTDFLHETLNKALVEDGGYKPRLAFGPVRVAMSGRRVS PPLFESMEIVGKDVAMARLKGLREHL >gi|148337405|gb|DS264454.1| GENE 299 327358 - 328836 1087 492 aa, chain + ## HITS:1 COG:no KEGG:BAD_0177 NR:ns ## KEGG: BAD_0177 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 492 1 487 487 921 95.0 0 MTELQHAAKATRPRIQPAEEGDRRPLSVSARLGRLQFHQSGKFRVLQFADIQDGPKVSKD TISLIEASLDATRPDLVIFNGNQIAGYDSAYALTSRKRRWDARPASASSEASGERYAAAL EHTRELVRATIEQLVHPLADRGVPWAVTFGNHDFQCGLDNAEIESICREFPGCINPERAA DGTTGIAVKHGVKHDVGDMEQDFGLPEQPVIACAPGTFALSVTDVDRTYDVLGLVLLDSG DYARSGGYGSPSEAALRFLADAPGLMTAQSQYQQSPQSQQDRQDAQELPHEPHKTLPTLP CMVFQHFPIEQYYRLLKPVAATAARAIEGYRNFAGRHFVLNEDKTQPGSYLGEGVSCPDA DSGEFAILDKAGYFAISAGHDHRNAFVGSVPVGTDGDRQMMMVASPTSGFGSYGPVPAKR AARLFEFDIRHPYEPRTQLLEYDELVGKPSAGKAYAYGMTSESKPDSEGMDLLHRPTWWS KTWNKLVSLFRR >gi|148337405|gb|DS264454.1| GENE 300 328944 - 329738 812 264 aa, chain - ## HITS:1 COG:MT3067 KEGG:ns NR:ns ## COG: MT3067 COG1414 # Protein_GI_number: 15842545 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 27 242 38 252 267 186 52.0 4e-47 MPKTQAMNATNEANGNYAATPQSNEIHSGVGVLDKTVKILDALESGPATLGQLVSATGLA RPTAHRLAIALERHRFVLRDQHGRFVLGSRFAELAAAAGEDRLLTAAAPILQTLLDRTGE SAQIYRRQGDQRVCIAAVERASGLRDSIPVGAMLSMEAGSAAQILLAWEDSERLHQGLRH AKFTAAKLTAVRKRGWAESINERDEGVCSISAPIRNASGQVIAAISISGPNGRMGANPGR RYAPLVMAAGKYLTDALIKASSGR >gi|148337405|gb|DS264454.1| GENE 301 330085 - 331488 1875 467 aa, chain + ## HITS:1 COG:MT3066 KEGG:ns NR:ns ## COG: MT3066 COG0065 # Protein_GI_number: 15842544 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 467 10 472 473 659 68.0 0 MGTTLAEKVWADHLVRKGSDGAPDLLYIDLMLMHEVTSPQAFEGLRLAGRKPRHVDQLIA TEDHNTPTVDIDRPNPDETSALQLSTLEKNCKDFGVRLCPLGDADQGVVHAFAPVLGLTQ PGMTIVCGDSHTSTHGAFGAMAIGIGTSEVEHVMATQTLSLKPFKTMAVNIEGDLPKGVT AKDIILAIIAKIGTGGGQGHVIEYRGEAIKKLSMDARMTICNMSIEAGARAGMIAPDEVT FEYLKGRPHAPEGEMWDKAVEYWKTLKTDDDAVFDKEVTINAEDLEPYVTWGTNPGQGVK ISGVVPDPASFNDETERSAAERAIAYMGLKPGMRIKDIAVDTVFIGSCTNGRLEDLRVAA SIMKGHHKADNIHRVLVVPASSRVRLQAEKEGLDKIFKDFGAEWRNAGCSMCLGMNPDKM VARERSISTSNRNFEGRQGKGSRTHLASPAVAAATAIRGTICSPADL >gi|148337405|gb|DS264454.1| GENE 302 331578 - 332267 931 229 aa, chain + ## HITS:1 COG:Cgl1285 KEGG:ns NR:ns ## COG: Cgl1285 COG0066 # Protein_GI_number: 19552535 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Corynebacterium glutamicum # 1 197 1 195 197 256 64.0 3e-68 MEKLTTLTGVAVPLRRSNVDTDQIIPAVFLKRVKKSGFDDALFYAWRRDPEFVLNKPEYK QGKILVAGPDFGIGSSREHAVWALHDYGFRVVISSRFADIFYGNTAKNGVLAAIMPQESI ELLWKLLDEEPGREMTVSLEDRTVTCGDVTLPFEVNDYTRWRLMNGYDDIDLTLQHEDDI IAYEKMRAEKFPFKPKTLPVKREPEQPIASAREGEYPDWQGPLADRGII >gi|148337405|gb|DS264454.1| GENE 303 332668 - 334281 807 537 aa, chain + ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 7 406 18 398 477 79 23.0 2e-14 MREGNRLEAKRAKGGLPHSLWETYSSFANTEGGLILLGVSEHEDHSLYITGVDDARNMAQ DFWNMVHDPSKVSAVVLSDNDVVIRHTSQGDVISIDIPRAARDCIPVYVGQNPMTGSYRR NGDGDYLCDEETVRAMLRDSDLLPLDRTIVEGMGADALNADSVASYRRQFKNRRPGHPWV GLSDEDFLLRIEALRLDGSQVRPTRAGLLMFGEAWRITSEFPYYFLDYREVMDDQERWND RFTSDDGTWSGNLYDFWGKVVNRLRSAVAHPFQLDADLHRIDDNLMDKAVREAVTNTLVH ADYFIRRGTVIIQYYDRIVLSNPGSLRLSSEEVMQGGISDTRNPTLMKMFNLIGIGEKAG SGFDVMREGCLFAGTAAPELEVFDDPGRVQLTLYPRKIAGDSMIAGASAVPGVSADGGGP VGAESPTMRNSEHGTGTVHRIGARGADRLNDMVGTFGKNVALPADFGNAIRPQSQLEKIT YALTVGGPQPTSYLAVVLGLGLTRTREILASLVKDGVIEPIGVGRGRKYRLAEHTGS >gi|148337405|gb|DS264454.1| GENE 304 334474 - 335616 1262 380 aa, chain + ## HITS:1 COG:PH1516 KEGG:ns NR:ns ## COG: PH1516 COG0167 # Protein_GI_number: 14591298 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Pyrococcus horikoshii # 136 364 61 265 303 65 28.0 1e-10 MSQGFAPFYDVNRTYEDNYLQGPFGAFAEVMKGDSAAGASAQSAQTTQSQSSDQAEEFLG FRVNLPFGIPAGPLLNERFTTAAFRMGFDLAVYKTVRSRAWGCNAFPNVLAVHPKNADGS LVPGSAELDEGVLADTRYELPISISNSFGVPSRDPDEWQPDMKKAIAAAGDGQLLVPSFQ GSRVDGMDRKAYIADHVTTAHLVTETGAGLMEMNTSCPNEGHNRLLCHDPHLVGEITEAV KNEIGDRPLIVKLAYIPNDTDLETMVRETVGHGTVQGFSTINTISARLVDANGNQALPGA GRDRSGVCGNAIRGAGLDMVGRLAAIREKLGLDFAIVGVGGVIRPDDYKAYREAGANVVM SATGAMWDANLAREIKETLR >gi|148337405|gb|DS264454.1| GENE 305 335712 - 337037 1967 441 aa, chain + ## HITS:1 COG:CT455 KEGG:ns NR:ns ## COG: CT455 COG0766 # Protein_GI_number: 15605182 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Chlamydia trachomatis # 9 438 4 432 444 373 46.0 1e-103 MSDNKNDILHVEGGKPLNGAIKVRGAKNFVSKAMVAALLAPGTSVLKNVPEIRDVHVVSD LLRLHGVDVTVDGANGVVTIDATNVQLADVADVDTLSGSSRIPILFSGPLLHRLGEAFIP ALGGCNIGGRPIDFHLETLRKLGANVDKEHKDGIHITAPNGLHGAKIHLPYPSVGATEQT LLAAVLAEGKTELSGAAIEPEIMDLVSVLQKMGAIISVDVDRTFRIEGVKELKGYTHTSL TDRIEAASWASAALATHGDIFVKGATQPEMMTFLNVFRKIGGEFDITDKGIRFWHPGGDL KPVAIETDVHPGFMTDWQQPLVVALTQANGLSIVHETVYENRFGFTKPLVQMGATIQLYR ECLGSLPCRFQQRNYKHSAVIFGPTPLTGRDIDVPDLRGGFSHLIAALAAKGPSNVQGIS LIDRGYADFRGKLEALGADFD >gi|148337405|gb|DS264454.1| GENE 306 337368 - 338288 1046 306 aa, chain + ## HITS:1 COG:BH1635 KEGG:ns NR:ns ## COG: BH1635 COG0204 # Protein_GI_number: 15614198 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Bacillus halodurans # 77 207 11 135 195 61 32.0 2e-09 MTNVSAAGGTMGAMASKGKPSPRSAVKPLSDEQVAKLAQKHHLVDPTHDFPTGPRKANTA EIEAQNPKATHRLLTGCDVVLRNHSKVKAWGLEHVPETGPFITAATHVTMYDVFVPMVSM FHQGRRPRYMAKAEMAKWPLIGKWFQLVGMQPVQRRAGKAKAIEETSVEILTSGRPLTVW PEGTVTRDPQKWPMSMKNGVGVIALESSRRLGCQVPLYCAVTWGAASINHWWPWPRKNVV MCYDEALDYADLLDGCDSWGDEVPTDRADELTRRIRVRMTEIMAEIRGEQAPDGYWDYRT MSRVKD >gi|148337405|gb|DS264454.1| GENE 307 338460 - 339458 1406 332 aa, chain + ## HITS:1 COG:Cgl1288 KEGG:ns NR:ns ## COG: Cgl1288 COG0240 # Protein_GI_number: 19552538 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 1 332 1 332 332 263 45.0 2e-70 MANVTVLGAGAWGTAFGQVLADAGNNVTMWAIEPEIVEGIRDHHHNGVRLPSVETLPSNM TATGDRAEAVANADIVIVAIAAQFARVALTEFKGLIPETALVASLMKGIERTTGKRMDEV VMETLDLPAERFAAISGPNLSKQIADREPAATVVACADIDNARTIATACTTDYFRAFVTR DVIGLEMCGSLKNVVALAVGMARGAGYGENTAAMIETRGLAELTALGEAAGADPKTFAGL AGVGDLIATCGSPLSRNYTFGSNLGKGLSVEEATKVSNGVAEGVPTTDAVVALGKQYGVP TPLATAMSHVLDDGISCAQMLSELFGEGITEE >gi|148337405|gb|DS264454.1| GENE 308 339533 - 340669 1614 378 aa, chain + ## HITS:1 COG:STM0380 KEGG:ns NR:ns ## COG: STM0380 COG1181 # Protein_GI_number: 16763760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Salmonella typhimurium LT2 # 1 377 1 351 364 275 41.0 1e-73 MAKKRIVVMYGGKADEHSISCISAASALRALDTDKFEAIPVGITKDGKWIVNGENPLGWS LDEGLPTVEKTPGAKDVVLEVALGQDGFFAREDDGTLTPFGHVDAVFPVLHGPYGEDGTI QGLFEMMGVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITLDARSFDKASEFKANA DAIMAQVSEAGLQYPLFVKPSRAGSSFGVTKVEHEGDAAELAAAVYEASHHDWRILVEQG IDAREIECAVLCPKAGEAPQASWPGEIVLDKRAEGDDQFYDFDSKYMDAAASHVEVPANL PEETLNLVRETAKKAFVAVDGAGLSRVDTFVTKDGKVMVNEINTMPGFTSISMYPKAWEA TGVRYTDLITMLIEGVLR >gi|148337405|gb|DS264454.1| GENE 309 340911 - 342077 2012 388 aa, chain + ## HITS:1 COG:AGc3890 KEGG:ns NR:ns ## COG: AGc3890 COG1840 # Protein_GI_number: 15889428 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Fe3+ transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 62 350 31 325 368 199 41.0 1e-50 MNVLRKIAVGSLAAVLACSMAACGSGNANSTDSASNTGKTVKVDEKSAKATSISDFGGMD GLVAAAEKEGALNVIALPHDWSNYGDVISGFKKKYPKIKINEQNPNASSKEEVDAGKTNK GTDAAPDVYDLGLAVASTSTDNFASYKVQAWDKIPDSVKDKDGKYYADYTGIMSIGWNAD KYGDIKSINDLTDPKFAGTVALNGKPAEAGAAFNGYLMINQLAGGDIKNLQPGLDFFKKL KDCGNLTTVDVTDGTIDSGQTGVVMDWTYNQASYQKSLKAKGVNWKFKTFKNAQVVSYYN QAINVDAPHPAAARLWEEYLYSADAQNDWFKGGANPVLLDSMKKDGTVDQTTLKNAITID GDPVSYTNEDSTRITTWLQDNWDKTIGN >gi|148337405|gb|DS264454.1| GENE 310 342079 - 342993 1094 304 aa, chain + ## HITS:1 COG:BMEII1121 KEGG:ns NR:ns ## COG: BMEII1121 COG4132 # Protein_GI_number: 17989466 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Brucella melitensis # 36 304 28 296 297 172 40.0 9e-43 MTAVLTSGAHAKRAGSSAISFAAHRRELGTIAVSIPFFAYTACFLLAPTVIVIVGAFQSA DGSFTVANFNKLFEANTIAAFGTSILVSVASAVIGAIVGALASYALVIGSKPNGLLRRMI SAISSVLAQFGGVMLAFAFIATIGINGVGTMLIKQLTGYVVNPNWLSSLPGLITIYCYFQ IPLMIIIFLPAVDSIRPQWREATESLGGNTFQYWTRVAGPILAPRFISAFLLLFASAFSA YATAAALFSQRSILVPLMIQGAMRNEMDPNQQGFAQVLAFAMIVVVAVVMMISHAVEKRA GRWQ >gi|148337405|gb|DS264454.1| GENE 311 342984 - 343898 1141 304 aa, chain + ## HITS:1 COG:BMEII1122 KEGG:ns NR:ns ## COG: BMEII1122 COG1177 # Protein_GI_number: 17989467 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport system, permease component II # Organism: Brucella melitensis # 34 292 10 262 272 127 31.0 2e-29 MAVNASAQNVSAKSQEKQNMQESQTMPPQLRAARLGKQRIVKTIILTVTLLFLFVPLVSM FLFTIRHPLSGKWSFDPWIAIFTGDGSALGADLSTLWSGLGASLALCVVTVLIMLVLLVP TMVIVHIRSRRLERAIEWVATLPLTIPAIVLVVGLGPIYRWLSADVLSTNAIWLCFAYVV LVMPFAFRALAVGLNSIDVKTLCEASRSLGASWPRVFFRVLIPNLWQSILSASFISIAVV LGEYTVASLLGRMNLQVALYQLGQSNSQISTAMSLLALLFGVILLVALDLISGAMRRNKE GDNS >gi|148337405|gb|DS264454.1| GENE 312 343895 - 345082 1596 395 aa, chain + ## HITS:1 COG:mll3065 KEGG:ns NR:ns ## COG: mll3065 COG3842 # Protein_GI_number: 13472692 # Func_class: E Amino acid transport and metabolism # Function: ABC-type spermidine/putrescine transport systems, ATPase components # Organism: Mesorhizobium loti # 48 360 11 319 354 262 47.0 1e-69 MTLAEQKAVVAHTSEAFSDTEPNVVTEAAKAVLKDSEARGGGVQMLGVDKIYPGSTVKAL DDFNLEINPGEMVVLLGGSGCGKSTALRSLAGLEDIQAGRILVGGQDVTGVPINKRDMAM VFQAYSLFPHMTALQNVEFGLEIRGVDRAERRRQAMEKLELVGLADQAKKYTQQMSGGQQ QRVALARALAVNPRVLLLDEPLSALDAKVRVQLRDEIRRIQLEAGTTTVFVTHDQEEALA VADRIGVMNHGRIEQIADPQTLYRRPGTEYVATFIGLTNRLPGIANGEEAVVFGQRVPLL DGSATDASTVLVRPENMTIELTDDADAVHGAGELGRVEMVHFLGALARVDVRVACAGMGG TIRVTVQLPANELPAGLAIGAQVVVAPRPIPALAV >gi|148337405|gb|DS264454.1| GENE 313 345278 - 346417 1422 379 aa, chain + ## HITS:1 COG:no KEGG:BAD_0191 NR:ns ## KEGG: BAD_0191 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 18 379 18 372 372 610 96.0 1e-173 MTFPQQPQQPQYPQYPQGPAPQYPQSQFPQQPLQYSQQFPQPNRNPFFEWLQRAKRDFSR IGASLCLMVIIWYAGVFLLKGVVRAVAGGVGAGGDMPNWMTFLISDVPLYLIAMPVAVLL MGKSTVIETRKFNMKPGMFFKLLLMCLPMMWVGSMVGSMLSLALSDGEATNRVADLAMQT NIWNVVFLVILGPIFEEWMFRKQLIDHTRKYGEKTAILLSGLAFGLFHMNLFQFFYAFLL GVMFGYIYMRTSKLRYSTAMHMIINFNGGVLAPWILTRVDLDQLDKVSQAAENGNVAAME QWASQNATGLAIMLVYFLLYGAVILAGFVLLIRNFRKAEFYIAPEELPRGTGARTVYGNV GMITFIVLTVLLTAISLFL >gi|148337405|gb|DS264454.1| GENE 314 346526 - 347311 1200 261 aa, chain - ## HITS:1 COG:alr1196 KEGG:ns NR:ns ## COG: alr1196 COG0668 # Protein_GI_number: 17228691 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 11 226 97 311 357 102 31.0 6e-22 MDPVEILMHWLAKNYSKLILLAVVLIVAALIDKALTKVVRRMLDKSQVPNASIFVNILRV VVWVFAIGTLLQPVFGINPTTLFTALGIGGLAVSLGLKDTIANVIGGFGLMLGRVIQPGD YVKVAGITGTVKDINWRQTIVRERNGNEMVIPNSILNTASLEKLDPSNECLVSVPFTAKA GVDVERMKADIVSTVEHATVGLANPQYKPVVKLNGFTPYGIDGTIYAFAKNDLLLSTMAD AVAQSIAHADYLEHRAVGSGE >gi|148337405|gb|DS264454.1| GENE 315 347443 - 348648 1160 401 aa, chain + ## HITS:1 COG:no KEGG:BAD_0193 NR:ns ## KEGG: BAD_0193 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 401 1 401 401 784 100.0 0 MGNVVDYVRREFHGFAELPFGDVDSLVLAELSYMRLSGLVPAFGEARSVATVPIRELLRA ESYDDMFVSNSSDMNEYRLALLRAVCESPRFRALRVGEYAERLSEREQQQFAAMTFDVGC GPVDSLYVAFRGTDGTLVGWKEDFNMAVRCPVPSQESAYRYVNSILDRSEGFLSSGDSPA VMLGGHSKGGNMAVYAAMRIAHDDIEVAGERARRLGLLPSLGGPVRGRNRRISRIFSHDG PGLPKSTVRGQAYRAIESRIRKTVPESSVVGMLLQSNAPVRIVKADAIGIMQHMGNSWQV AENGDFEQVDELTAGAQLIKRTLDGWLDTVSQEQRERAIDQIYGIFAAAGYGNIADLVEH WTDSLPKIVEAARNTDRETRGLIRAVIKAIPVSAAKAVREG >gi|148337405|gb|DS264454.1| GENE 316 348468 - 348800 116 110 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCHNSIFHAFSRIVTHESAEMRLGNHPDQPLHPPIAPPRHALQPASALNPLQPSRTAFAA LTGIALITALMSPRVSRSVLRAASTIFGSESVQCSTKSAILPYPAAAKIP >gi|148337405|gb|DS264454.1| GENE 317 348985 - 350193 1239 402 aa, chain + ## HITS:1 COG:no KEGG:BAD_0194 NR:ns ## KEGG: BAD_0194 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 402 1 402 402 809 100.0 0 MGNIIDYARTETRDFGELPFREADALVLAQLSYDDVPECVPRLDDIESRYGTLHDRVKQF DPRHPIRSVRMLRKPPFDGVTIARADDELHHGSAVPDHNVENVGLVDPQVTHDFYHAIAA NPRFSDIEMGAFLEQFDGDEQTQFAAVTYRLPSGMLVVAFRGTDDSLVGWKEDFNMAFQY PVPAQVTAADYLARVAELWKDVPIVLTGHSKGGNLAVYAAMNAEDGVKDRIERIYSLDGP GFPEAVVNSFEYASVSDRIVKIVPDSSVVGMVLETPERCIVVKSDVEGIMQHFVFSWQMH GGEFDKVEDVASSSVTFNKALNKWLANLSKEQRERAVDALFAVLEASGAGSISAMMAAGP KVIPEMLGTYVGLSGEDRRNLNQALAIMLQAALARNPKVRRK >gi|148337405|gb|DS264454.1| GENE 318 350349 - 351026 689 225 aa, chain + ## HITS:1 COG:no KEGG:BAD_0195 NR:ns ## KEGG: BAD_0195 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 225 1 225 225 440 98.0 1e-122 MPRPRRDSEILPAKERLENAFWELLSEREYRKITVTDIVRTADVNRNSFYYHFTGLPELA DSAILHAVENTPLPSAPNANFNPDNEWRKHVTALLREPEQRQRLDRLALLAGPHSSPELV ESLRDFGRLTLISVLGLDADHLDLKTDLMLDFTVGGMLAVLRRWPKLHEQLPMDAVFNED LAVLATGMFMSMSKTDMLGYWKRIFSSGFVAGQGVQSEAEQKAEQ >gi|148337405|gb|DS264454.1| GENE 319 351131 - 352321 1902 396 aa, chain + ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 392 1 391 393 389 48.0 1e-108 MINEDYKAMLGGKSVIRELSEYATARGAEIGYENVFDYSLGNPSVPCPQDYTDAVIDMYK TAEPVALHGYSPSLGIPSVRKAIAESLNRRFDMDYTADYIFPTTGAAGALAHALRVVTKP GDEVITFAPYFPEYQPYVNGTGAHLTVVPADTENFQINFDAFEKALNPGTAAVLINTPNN PSGAVYSAETLTRLAEVLNAKQTEYGHDIFLIADEPYREIVFDGGEQPYPSKFYDNTLSC YSYSKSLSLPGERIGYVAVNPRATDAKLIVPMCGQISRGTGHNCPSSTAQLAVAKVVDET SDLSVYETNMNLLYDALTRLGFDVVRPGGTFYIFPKALEEDANAFCMKAKDYDLILVPSD SFGVPGYFRMAYCIDTEKVERSIAALEKFVHEVYGR >gi|148337405|gb|DS264454.1| GENE 320 352681 - 353574 1230 297 aa, chain - ## HITS:1 COG:MT1154 KEGG:ns NR:ns ## COG: MT1154 COG1023 # Protein_GI_number: 15840560 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted 6-phosphogluconate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 1 290 1 337 340 263 45.0 4e-70 MQLGMIGLGRMGGNMAKRIAAAGHEVVGYDRSPESDRTVASLKELVAALKAPRLVWVMVP AGEATDSTINELAELLQPGDMIIDGGNSRYTDDARHAAELEPKGIHFMDCGVSGGVWGID RGYALMVGGSQGDFESARPIFEALKPEGDSGLVLAGPVGGGHFAKMVHNGIEYGMMQAFG EGFATMVKSDLVEDPAAVMSSWRDGSVVQSWLLDLLAIAFKSDPTLKSMPPVANESGEAK WMIEAALELGVPTPATAAALYARQTSRGGADNILRVVSTMRAQFGGHVTKIDEIATH >gi|148337405|gb|DS264454.1| GENE 321 353761 - 355089 2140 442 aa, chain - ## HITS:1 COG:PA2322 KEGG:ns NR:ns ## COG: PA2322 COG2610 # Protein_GI_number: 15597518 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism # Function: H+/gluconate symporter and related permeases # Organism: Pseudomonas aeruginosa # 3 442 10 450 450 315 45.0 1e-85 MNLIAAAIIGIAVIVLLIAACKVHPFLSLLAGSFVMAVCAGVPFDKAFDSFTSGVGGTIS NVGLLIAFGSIIGTILFKSGGADTIVDTIMAKTPLQRLPWAMALIAFIVGIPMFFEVGVV ILIPVVLFAARRSKSPVVLLGIPALAGLSTLHAFVPPHPGPLTAIGALNANLGITLALGL IVAIPTVIISGPLFGRLAAKWVPIAAPENEAEAEAPKSAENRPSFGTALSVILLPVVLML AASIVDLTGQNTTAWGRAIAFLGTPLVALLITTVFAMVALGYMQKFSRDAVNGMVGQSFG SVAGIILIVAAGGGFKQTLVDSGIGDVIANSITESAMNPLIAGWLVAVLIRLATGSATVA TVTASGIMVPLAAGMSPTHLALLVLAIGAGSVFFSHLNDAGFWLVKEYFGMSVGQTLKTW SLMETILSVVGLGCVMLLSLVL >gi|148337405|gb|DS264454.1| GENE 322 355172 - 355708 760 178 aa, chain - ## HITS:1 COG:DR1910 KEGG:ns NR:ns ## COG: DR1910 COG3265 # Protein_GI_number: 15806909 # Func_class: G Carbohydrate transport and metabolism # Function: Gluconate kinase # Organism: Deinococcus radiodurans # 8 163 1 157 172 161 49.0 4e-40 MSIHVVVMGVAGCGKSTVAEAIHERLGYVYAEGDDFHPQANIDKMSAGIPLTDEDRWPWL KVINTWMVAREALDENTVVSSSALKRSYREVLAQNVPTFFVHLTGSQELIQQRLNERKGH FMPPALLPSQFAILEPLQPDENGVEVSIEGSVEEMVERAVAAVNEYAAKVASQSQQAE >gi|148337405|gb|DS264454.1| GENE 323 355979 - 356698 808 239 aa, chain + ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 11 236 23 246 250 164 44.0 1e-40 MAGNENGGELLQDAVCRTLAIEMLDGKWPAGESLTLEDVQNRFGISRTVAREVAKTLESM GAVTVRRRVGLVARPFSDWQALNHQVIEWRLHSTQRERQLSSLTELRLAVEPAAAASAAR LASIDVKAKFPVYAAQMRQIAESNEEGAAGLTKFHDLDVEFHTLILRESGNELFAALADT IATVLRGRVELGKYPMKPKPAALDAHDAVADAIAKGDPERARKAMFDIVDEVARALNFF >gi|148337405|gb|DS264454.1| GENE 324 356742 - 357533 1034 263 aa, chain - ## HITS:1 COG:no KEGG:BAD_0201 NR:ns ## KEGG: BAD_0201 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 263 1 263 263 509 100.0 1e-143 MSLANELVEAVSAWPEVEAITLGGSRATGDNDEKSDYDVYVYVTAPVSAERRRRLLRNYC SHMEIDNDFWETEDDCTLNDGTNIDVLYRDLDQFAANVADVVERFQASNGYTTCMWHNML TSKVLFDRDGQYAATRQRFDVPFPEELRRNIINRNMRLLTGNLPSYDAQIRKAASRGDKI AVNHRMAAFMESYFDVLFALNRRTHPGEKRLDKLAERDCAILPKDFRKNIDTLFDSMYAD QAVFSETLGEIVDDLRQTVDANL >gi|148337405|gb|DS264454.1| GENE 325 357750 - 359114 1903 454 aa, chain - ## HITS:1 COG:CAC1585 KEGG:ns NR:ns ## COG: CAC1585 COG2270 # Protein_GI_number: 15894863 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 36 449 4 417 425 340 45.0 4e-93 MTDTAEPQTQPSQQNAQAQQPQQSNQKSSQQSKHMMTPREKKWIVYDVGNSAFVLLSTAV VPIYANSLLKAAGETNIVSTWGYAQTIASLVIAVLMPLLGSIADVQGMKIRFFTGFFLTG VVMCCAMAMPLGWLAFIIVYVLATIGLNGSLTFYDSMLVDTTSNERMDRISSHGYAWGYI GSTVPFIVCIALIFGGPALFGWSTTACTRASFVITALWWVAFTIPLLTSYKQVHYRATAG QAGEAIRGTFAELGSTFRAIRKNKPLWMFMIAFFFYIDAVNTVISMSTSYGTQLGIDSTQ LVVALLVTQFVAFPCSIIYGKLAGRFGSKTMITAAVVAYMCIVFFAAFFLRAALEFWILA ILVGMFQGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASIIGTFLVATTTSLTGNAS IGVLSIAILLAVALVFLLLQKDPTKGSTEAATVD >gi|148337405|gb|DS264454.1| GENE 326 359440 - 359634 339 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025221|ref|YP_909066.1| 50S ribosomal protein L28 [Bifidobacterium adolescentis ATCC 15703] # 1 64 1 64 64 135 100 6e-30 MAARCAVCGKGPQTGFTVSHSHIRNKRTFRPNLQPVRTTIDGENVRVRVCVKCIKAGKVQ RVEA >gi|148337405|gb|DS264454.1| GENE 327 359795 - 362458 2492 887 aa, chain + ## HITS:1 COG:MT3051 KEGG:ns NR:ns ## COG: MT3051 COG1200 # Protein_GI_number: 15842526 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Mycobacterium tuberculosis CDC1551 # 23 850 22 703 737 338 33.0 3e-92 MSTTWQTPISSFETNRRRVGALKSLGVVSVGDALTYYPFRVTDPVPARALREAKIGENMA FAAHVRGVRVFPMARRGFRLIADVDDGDFARSRHMDASMASLVFFSYRKSYVDWIQRKLH EGALLVVAGEPSVYNDRLQFTHPDILTVDPAGEQLRSRSSEEAAEWDDGFGTEQPAVVPQ SPTMPNLKYDAASVPEAMRHVCRPRPVYHANSRISSEHIHESIEKCMDRLCGDEYAAAQA ARALHGADASDAQHGEFDAPQADRQARTEALAAAIPDIMPEAFRMEHGLMHRAEAFMAIH DPQNRDGFNKALRTLRYEEALICQTALVQSRDSSRKATATACADTRLKDDFVESLPFSLT DGQQQVIADISDDMARDYPMQRLLQGEVGSGKTVVAVAAMMQAVGSGKQAVLVAPTQVLA EQHYSSIRGMVDRMCGTGEEADENAKSGESQTKSTHHAVVDESGQVTSGNAPEPQNGGQS DGGQVEKLLDGQSNSLPDIPVLLLTGGMKLAARRRVLAQAASGKPCIVVATHAAFSKTFQ APNLALAVIDEQHRFGVEQRESLNAKGSTAPHLLVMTATPIPRTAAMTWFGDLDISWLTE LPGGRKPIRTFVVPEANGPLMAEMFGLIRKRIDAGERAYVVCPRIDADAKDADDAGGSGD AEVGYAFDATYDLGEDDEQREQRPPLHSVAEIAERLRSLPQFAGIRIATLTGRDDDKTKS QIMADFEAGVTPILVATTVIEVGVDVAQASCMVIFDADRYGLSQLHQLRGRVGRGGTESG AFLISRAPEGSDAAKRLDVIAGTLDGAEIAQADLEFRGAGDVLGDAQSGGKSGLKLLRVV KDVKIIEEARAEAAKLVAEDPTLQGYVQLAGAVLDFTRGNETFLTSN >gi|148337405|gb|DS264454.1| GENE 328 362446 - 363093 194 215 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764797|ref|ZP_02171850.1| ribosomal protein L29 [Bacillus selenitireducens MLS10] # 1 196 5 189 199 79 33 4e-13 DQQLGSMVMRVISGRFKGMALTTPKPGTRPTTDRTKEAIFSHLDSWGVLDDARVLDLFAG TGALGIEALSRGARELVAVESAAPAAALIAKTLTALKHNRSWEPGMSARVVKARAEKYAA SASAIAPFGVIFIDPPYAFETEACNQLLADLAGRESGELTGEGTVIVLERSTRSDEPTAP EGWDITDRRDYGETAVYYIEPAESAEPAEPVESAD >gi|148337405|gb|DS264454.1| GENE 329 363168 - 364070 1048 300 aa, chain - ## HITS:1 COG:Cgl2001 KEGG:ns NR:ns ## COG: Cgl2001 COG0336 # Protein_GI_number: 19553251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Corynebacterium glutamicum # 1 285 15 288 292 237 46.0 2e-62 MKIDIVSVFPEYFEVLNLSLLGKAQEKGLVEVTAHNLRDWTHDVHHSVDDTPVGGGAGMV MKPEVWSECLDELLHLEPTTVTCDSTADADDTASADAAEPAESATEIAANADTVPATDRP VLIFPNPSAPLFTQQDATELSHANHLLFGCGRYEGYDARIPQYYRAQGVDVREYSIGDYV LNGGEVAVSVMLEAITRLLPGFMGNAASIVEESYTGENALLEHRQYTKPADWRGIKVPDV LLSGDHAKVDRFRRDEALAKTNELRPDLIEALDCSKLDKADRKTLMALGWEVSGAHPRQR >gi|148337405|gb|DS264454.1| GENE 330 364072 - 364179 60 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFHNTGTPAKRGAYEKGAGIIASALLEKQRIRAPE >gi|148337405|gb|DS264454.1| GENE 331 364163 - 364750 777 195 aa, chain - ## HITS:1 COG:ML1616 KEGG:ns NR:ns ## COG: ML1616 COG0806 # Protein_GI_number: 15827851 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Mycobacterium leprae # 12 192 10 177 179 81 32.0 7e-16 MHSDDPQQLELLRVCRIGRAQGLKGEVTVQIFTDEPEYRFAPGAVLYTKDGEEEYVVESS RTFKNRWIIKFEGIDDRDASEAANGVVLYGEADDPEEMLEADEWYPKDLISLEARLAEGN TLGLAPGTVVGKVVDVIEVAQWLLKIRLANPVKDADGVVVENSALVPFVDELVPDIDLEG GYLTLDPPGGLIPGL >gi|148337405|gb|DS264454.1| GENE 332 364772 - 365005 237 77 aa, chain - ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 74 4 77 80 63 48.0 6e-11 MLAQAVEHLIKNIVDFPDDVSVKSHENPRGELIRVRVNPEDIGRVIGRSGRTANAIRTVV QALSDHKVRVDIMDVRR >gi|148337405|gb|DS264454.1| GENE 333 365008 - 365457 744 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025227|ref|YP_909072.1| 30S ribosomal protein S16 [Bifidobacterium adolescentis ATCC 15703] # 1 149 1 149 149 291 99 6e-77 MATKIRLKRMGKKFYAFYRVVIMDSRTKRDGRAIEEIGTYNPNTQPSTININSERAQYWL GVGAQPTEQVLNLLKITGDWQKFKGLDGAEGTLKTVEAGPDAAARVEAVEAQAQKLKAAK SEADAKAKAEAEAAATEEAPAEEPAAEAE >gi|148337405|gb|DS264454.1| GENE 334 365824 - 366858 1126 344 aa, chain + ## HITS:1 COG:no KEGG:BAD_0210 NR:ns ## KEGG: BAD_0210 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 344 1 344 344 644 99.0 0 MSVALWIVLLVCVLWIALSEMPAGWDGHLPLPYLIALTPLLWIPTLAIAIAGVVRHDTAL ASVAAIACIASLLRKIAYWNNNLTSINTAQMVADNIAKKRETSCGTHTSTAAEAAKHGRF RVMTLNCRYGRANAAAIVSAVKEHDVAVLALQELTDDLVAALDEAGLSDLLPYRQLGENK DTDNGGFNGIWIRIEPSDTSPITAVIPAADVPGVCFPIDAMRGITFVSAHPKSPMRGCRD WSAGIIGLGELATSQKQGDITVVLGDLNSGTDHPSFRKLLDAGFQDAALTEAKGRRATFP SWLPWPRLILDHILFTAGLTASDVRSFTVNGTDHLALAATLTLK >gi|148337405|gb|DS264454.1| GENE 335 366986 - 368635 2255 549 aa, chain - ## HITS:1 COG:Cgl2009 KEGG:ns NR:ns ## COG: Cgl2009 COG0541 # Protein_GI_number: 19553259 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Corynebacterium glutamicum # 4 482 2 475 547 519 61.0 1e-147 MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTGRIRER ALGTEVSEALNPAQQVVKIVNEELTAVLGAGVDRPLNFAKNPPTIIMLAGLQGAGKTTLA GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGEAVVSPG QTTGDPVKVARDAVEVAKQKLYDTVIIDTAGRLGVDEELMKQARDIRDAVQPNEILFVID AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF EVFHPDRMASRILDMGDILTLIEQAQKQFDEEEARKAAVKISDGSFGLDDFLDQLQQVRK LGPMKNLLGMIPGMAAHRKELEQFDEREIDRTEAIIRSMTPDERRDPSIIDGSRRARIAY GSGVTVSQVNALLQRFDQAAKMMRRMSNKVGAGVPGFGGPAMGGGKGKGKGKKNKKKSGK SGNPMKREAEEKALRDKLAGKASGGASSGGSAFAKKSQNPALPAGLQDMLGDSGELPPNL GGGLSGLLH >gi|148337405|gb|DS264454.1| GENE 336 368691 - 370430 1911 579 aa, chain - ## HITS:1 COG:Cgl2589 KEGG:ns NR:ns ## COG: Cgl2589 COG0215 # Protein_GI_number: 19553839 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 61 579 3 460 460 409 46.0 1e-114 MTLAIRLCVCIRSQYDAVHMPGKPSVMSDSGNILMTMTNTQEPQNTNTSGALAVAKAAAG LKLYDTASHAVSSFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGYKV TFVRNVTDIDDKILDKAAAAGQQWWERAYIYEREFTEAYSKLGVEPPTYEPRATGHMIDM IDLIKKIIDNGHGYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASEVTDAMG PSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRPGWHIEC SAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDSAARWMHSAWVTAKGEKMSKS LGNGLSVPAVLAEHSAWVVRYALGSVQYRSMLEWSDQTLAEAQSAYDRVANFIERAGAAV GEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSGNTLLSKLADRADSDV AKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSAEHDALDKLVSEQLAE RAEARKAKDFARADAIRDALGAAGIAIEDGPQGSTWSLK >gi|148337405|gb|DS264454.1| GENE 337 370458 - 371186 895 242 aa, chain + ## HITS:1 COG:slr0541 KEGG:ns NR:ns ## COG: slr0541 COG0518 # Protein_GI_number: 16332036 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Synechocystis # 3 190 2 193 236 124 39.0 2e-28 MTQSHVLILQHVPWEKPGRILDSLDDLGMSYEVMNIAKEKKPDLPDFSDVSGIVIMGGPM GALDTDKYPGLKAESKLVRAAVSVGKPLLGVCLGHQIIATALGAKLKKGSEPEIGFAPIK RIDKHDYFSMWNKTLDVLHWHNDVVTLPEGAQPLAKSAKTKNQAFRFGSALGLQFHLEVT PTLLDEWLDEPCMVKDLKAAGGSKSQLRDAFAEYNPQLQPMADQVFSGFAARCSTYAATL ER >gi|148337405|gb|DS264454.1| GENE 338 371202 - 371339 57 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVFGYRTKKSLKFSLSETLVHHLTTYGTQEPPTEGTQLAIQWGV >gi|148337405|gb|DS264454.1| GENE 339 371317 - 371511 72 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRYPKTTTYGSGKPPTESSRAFSLPTFQGLLSTFRIMQLVSKPQIRVREAVFRRRATLVS YADL >gi|148337405|gb|DS264454.1| GENE 340 371498 - 373663 2617 721 aa, chain + ## HITS:1 COG:Rv1668c KEGG:ns NR:ns ## COG: Rv1668c COG0488 # Protein_GI_number: 15608806 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis H37Rv # 6 302 5 301 372 338 56.0 3e-92 MPTYDLGLEHVSLAFATKNIFTDVTQGVFEGDRIGIVGKNGDGKSTLLHLFKGTQEPDSG RVTMRNGLTFGMLDQRDPLDDNATVREAALEGREDYEWAAETKSREIVEALLGGISLDAK IGSLSGGQRRRADLARLLLKDWDILALDEPTNHLDVVTIHWLAEHLKNRWPSGQGALLLV THDRWFLDEVCESMWEVHDGVIDPFEGGYSAYMLQRVERDRQADVRETKRRNLARKELAW LTRGARARSTKQKFHVKAARELIADVPPVRNTLELKQMATSRLGKQVVDLIDVTQIFEHA QGEADIDPDVAEMEASASRVDVVPAMYAEPQAHGSVEVAVDDLTDPRLVDAGVPEARQAA QAARQAEEESHESGGDADESTPEVTSAARKVTVTGRKILDDVTWLIGPGDRFGIVGANGA GKSTLLKILDGTITPTAGHVNIGKTVKFAVLSQRLDELEKLGKYKIKEVLSRYKPSYIVD GKETTPGQMMERLGFESAQLMTPIKDLSGGQKRRMQLLLILLDEPNVLIMDEPGNDLDTD MLAVMEDLLDTWPGTLIVVSHDRYLLERVTDQQFALIGGKIRHLPGGVQDYLDMTEAIKN GKDPFADEKTGKAGKASKGGNDAASASVVGDSSSVSADGDSAAAAPKLTGKAFHEASKRV AAIERKLAKLEEQKADLEAQMAAHDPSDYEGLGKLNEQLQSVTDESESLEMEWMELSEQL E >gi|148337405|gb|DS264454.1| GENE 341 373760 - 374059 212 99 aa, chain - ## HITS:1 COG:no KEGG:Balac_0042 NR:ns ## KEGG: Balac_0042 # Name: not_defined # Def: hypothetical protein # Organism: B.animalis_lactis_Bl-04 # Pathway: not_defined # 28 98 4 74 76 107 66.0 2e-22 MGRLTADFAKAFSRDLKKNAKRRNWNLTELEKVIDLVVENTPETLEELRRRHNMHTLSGN WRGRYECHVANAGDWLVIWSSNDSVAFFERTGSHDELFR >gi|148337405|gb|DS264454.1| GENE 342 374059 - 374343 350 94 aa, chain - ## HITS:1 COG:no KEGG:Arch_1197 NR:ns ## KEGG: Arch_1197 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family # Organism: A.haemolyticum # Pathway: not_defined # 8 91 2 84 87 68 45.0 1e-10 MRFLMSASTLTIRMDDELKRSAADVAEYYGLDLSSVVRAVFKQMVNTGRIPLTFAPEEPN GESLNAAAEADSFMASGKTGRFTNGHDLLEAAMR >gi|148337405|gb|DS264454.1| GENE 343 374370 - 374522 80 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYIHFSRRMIPSKADSWLAALRASFLAKAIVEQRLCYFQYAGNTESGRFM >gi|148337405|gb|DS264454.1| GENE 344 374445 - 375332 442 295 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486619|ref|ZP_02028026.1| ## NR: gi|154486619|ref|ZP_02028026.1| hypothetical protein BIFADO_00436 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00436 [Bifidobacterium adolescentis L2-32] # 93 295 1 203 203 392 100.0 1e-107 MHGLVEETLCGVGECDEMTIDSIHAIAALCVGIVLIALSWLLPRDSGEYVRCTQCLKYHQ ACSHICPACLTPDSTASSAPQYAYILTTRTRGMHIQLLLAVGEFLICVAQCALPCLIIKN IVVNAGLPTAYGINQHIKIAFVLLLVPTVACWYAFLGSGLRGEQSYSPARPMVFRRGTPS IFKELLSGLGFALTQSALLWLVIRPMLAVNGASAFMLEDGRPLLAYGIGTVCCVVAFAIS CCVAPCTFGTFRHVPRGGYAIDQATNAVKVSHEPSGFSIASVLEIAQTLFDDCLR >gi|148337405|gb|DS264454.1| GENE 345 375630 - 376004 415 124 aa, chain + ## HITS:1 COG:no KEGG:BAD_0215 NR:ns ## KEGG: BAD_0215 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 124 89 212 212 222 92.0 3e-57 MDALDRIAADDLNNSDKLVLVNKLGAKSVHGDDAIPFAKKVDENNMYYVVSMCKQKEQAP YSLVLYKDGQPHTVTTRESCTSNGVETVSLPAKNFPSATSLSIINIGNTDLVVSVYEVKE NHHE >gi|148337405|gb|DS264454.1| GENE 346 376165 - 376515 63 116 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAGSLPKNWLSPGGTYTVTKAKTTTVTGSVTGGVDAEFSSYVKAHVQSSLSTSQTVSESQ GWSWTNTSNTTKWVQLGAAGYEFDYTRYDVVSPCNVVNQKYKHAKMPTNQPWLYHN >gi|148337405|gb|DS264454.1| GENE 347 376574 - 377728 412 384 aa, chain - ## HITS:1 COG:no KEGG:BAD_0216 NR:ns ## KEGG: BAD_0216 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 373 1 373 375 721 97.0 0 MRLPQQIMSLAKAVRKPYLAGSIICICFFLLELTAWPNMSPWSWLYLAPYCIALLLLTWF PVPASMAILVTHIACAIIPAICDGPSTLYGTWLVCGIVAFEIKRFEFAIMGPLLCALALP LGYWTGGIDYNPSIPVLACSYIGAFFVGFAIRWKIQTEQRKTDLAIAQEQVRRQQKRLKE IHILHDSIAGAMTYAILLCRKKEPSESSDTLPQIEQVLMQALHELRTQIISPMTDELKTD KEEDADELFQQHIEAQCKRLRILGFTGTPIIRGNLNAMDKSLLPSLQTVCTEILNNIAKH GKPGAFAFILSVGPDAVRIFASNLYNAAINSAPENHYGTALIQDFAQQHNGTMTINSENE EWSLSLTIPLAHQVKLMFSPTEKL >gi|148337405|gb|DS264454.1| GENE 348 377731 - 378360 161 209 aa, chain - ## HITS:1 COG:SA1666 KEGG:ns NR:ns ## COG: SA1666 COG2197 # Protein_GI_number: 15927422 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Staphylococcus aureus N315 # 12 209 6 207 207 84 27.0 2e-16 MRTIVNDSTLGIVDNDPLVASAIQSLLVETCAPIQILWTVTSAEQALEAMRDSAQRPQAV LTDIAMPGMNGSELAHHIKEQHPDIAVIGISAFLDDENEKRYGAQWSDAFYAIIPKEIPT IQLVRIIGKATGNDEVASWAGKSINSMRLSGKELQIIANYARGFTTSTIAHQLNISEASV KTYARRAFEKLHAHSRAEAVAMCVRNGWI >gi|148337405|gb|DS264454.1| GENE 349 378527 - 379138 364 203 aa, chain + ## HITS:1 COG:no KEGG:BAD_0218 NR:ns ## KEGG: BAD_0218 # Name: not_defined # Def: transcription regulator ArsR # Organism: B.adolescentis # Pathway: not_defined # 1 203 1 203 203 350 88.0 2e-95 MTDMTPNEARMPEDAAVTVTNADTLRAMASPIRMRILGTLRVNGEQTVGSISEQLGEAPG AISYHLGQLARVGLVEKVRSPDGDRRKSWWKACQTAVRLGNSEEKNSADKAKAMDLFRRS AALSYEMAYERFLDRLPELPREWADSCTSDDHVLNLTAEEMCLMIEELNEVVRRWQIKAG MHGDDELGVEPVALILQAFRWFS >gi|148337405|gb|DS264454.1| GENE 350 379219 - 380478 1082 419 aa, chain + ## HITS:1 COG:TM1336 KEGG:ns NR:ns ## COG: TM1336 COG0477 # Protein_GI_number: 15644089 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermotoga maritima # 24 401 15 372 390 75 21.0 2e-13 MDGTAKSFWQSAGYVSWFTADTASAVGAALRALAISLLGYAVSGSTIAAGWLGTSSMIAQ QVASVFGGTFVDRHDRKRLIVANAVVGVLAWGAIAMLLLCGALSFPVLLLIAVLASGING FLGSATDAMLRSIIDIRYYPKARSLNEGRDATIAMAGSPIGGFLYSIAPWLPFLASACMY AVAGVAATGIREHGADGGRIGETDGDAVKGGFFRDFLEGWSWSLHRKTLVIVLIVAALVN FGVNGIQYAIQLHLVSCGTNATLIGFISGGISLTMLVGSLLAGKLSDKVSVGPTVCLAYL FICLCALPMALTDNYWVMLVANSFVGLPFPLINAMLLGFIFAKSPTSMQGRITVTLTVPA QVLSMFCSAVAGTLLPVFGFHGAVLVFLAVLVASAVLVICSRSIRSIPKAAQWEHTMLR >gi|148337405|gb|DS264454.1| GENE 351 380555 - 381109 948 184 aa, chain - ## HITS:1 COG:MT3082 KEGG:ns NR:ns ## COG: MT3082 COG0440 # Protein_GI_number: 15842560 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 12 172 4 164 168 174 59.0 8e-44 MANYPASQPGSKRHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVT ADVEEVPLEQIIKQLNKLLHVLKIVDLDPETTVERELVLIKVAADESNRSDVLEIVRLFR VRVVDVNPESLTIEATGAEGKIDALLGLLEHYGIIELVRSGAVAVTRGPKALSEKVLGSE ITGR >gi|148337405|gb|DS264454.1| GENE 352 381142 - 383001 2650 619 aa, chain - ## HITS:1 COG:Rv3003c KEGG:ns NR:ns ## COG: Rv3003c COG0028 # Protein_GI_number: 15610140 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium tuberculosis H37Rv # 3 612 14 609 618 678 56.0 0 MLPTPLQAFSGMPKASATTEKQTIVDGEKMTGAEALVRSLEDLGVKDVFGVPGGAILPVY DSIKDDTKFRFVLMRHEQAAGHAAEGYALTTGQVGVCIVTSGPGATNMITPIADANMDSI PMVVITGQVGVNAIGTDAFQEADIVGATYPVVKHSYLVTRAQDIPRVLTEAHYIARSGRP GPVVVDVTKTAQTGEMYYSWPQRMILPGYNPTTKAHGRVLSDAAKLFEQSYRPVLYVGGG AVRSDAGELVEELAEVTGAPIVTTLPARGIVPDSDPKVLGMLGMHGTIAATGAVQRCDLL VAIGARFDDRVTGKLDAFAPGARVIHIDIDPAEIGKNRQPDVPIVGDVATVLKDLIPEIK REQAVHGKPDTSHWWDVINKWREEYPITWDEPTDGSLAPQWVVKQLSDMADPNTVWVSGV GQHQMWATQIIEFNKPHSWLSSGGLGTMGFGLPAAIGARVGSAREFDDKKPVWLIDGDGS FQMTSEELAAAFLDHAPVKIALLNNSVYGMVRQWQTLFYNHHYSATNLLDGENTSDIVDV PDFVKLAEAYGCVGMRAFTKDEAIECIKKANEINDRPVLIDFRVWKDAMVWPMVAAGDSN DNVTYMPGVKPLQRAGENE >gi|148337405|gb|DS264454.1| GENE 353 383306 - 384202 1284 298 aa, chain - ## HITS:1 COG:MT2995 KEGG:ns NR:ns ## COG: MT2995 COG0571 # Protein_GI_number: 15842471 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium tuberculosis CDC1551 # 42 241 8 209 240 164 47.0 2e-40 MAKETNQDNAQNNTQTENGNNTNAGRIGTSITPEGEMTANVLLEALGTTIEPDLLVEALT HRSFSHEHEGAKNYERLEFLGDAVLELVSTETLYKVHPDMNEGQLAKMRAKAVSEESLSK IAREKLHVGPYILLGHGEAEQGGADKSSILCDIVESLIGATFIQHGIDEARRVVHHLVDD TLAEVATEGPALDWKTSLTVKAHEMGLPDPHYQTSVAGPEYALEFTARAILGDGGEVIGV GTGSSKRKAQLAAAEMGWKALDSRKGEMGGKQNGKTHKSHHRSHRKSNGGTQDAAQGK >gi|148337405|gb|DS264454.1| GENE 354 384448 - 384642 352 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025242|ref|YP_909087.1| 50S ribosomal protein L32 [Bifidobacterium adolescentis ATCC 15703] # 1 64 1 64 64 140 100 2e-31 MALPKYKTSRANTHSRRANWKAKAAQTVTCPNCGAPTLPHMACPSCGSFRGRVYREAVRS IHTK >gi|148337405|gb|DS264454.1| GENE 355 384738 - 385352 899 204 aa, chain - ## HITS:1 COG:Rv2926c KEGG:ns NR:ns ## COG: Rv2926c COG1399 # Protein_GI_number: 15610063 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Mycobacterium tuberculosis H37Rv # 7 193 27 192 207 107 32.0 1e-23 MARTEDSPWAVSVAQVASRPGQSKEIDATFPAPSGIGDEIVGVDEGTDVSVVGSFDSIVD GLILNARISAPVHAECTRCLKPIQRDWTVNVTSFFPYEDKSAAGKGGKAGKNGKEEEVDI IAGEDEAEDTYPLLDGGAWADLEALLRDTLVEELPLQPLCKPDCKGLCSQCGIDLNENPD HQHDMTDIRFAALEGLKAKLEGKE >gi|148337405|gb|DS264454.1| GENE 356 385421 - 386248 983 275 aa, chain - ## HITS:1 COG:no KEGG:BAD_0226 NR:ns ## KEGG: BAD_0226 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 275 2 276 276 400 98.0 1e-110 MSEETNDFKPLADADDATSQQPVTAAADYPVTGAVAGTAATNNSATGNAADRATDEPAKP AESSKPSISMSDLPDLRATFDPNAPLDDSSDRSRDEFTTVYDIIDSIEEELDEAKPILFA PSSVRVDRESFTGKLDKLKKMLPVQLERASALMRESERRLESAQTQANAIIASAQSRAAD TVREANEQAQFLAGQENVTELARQKARGILDQAQAKADKLTQNADKYCITMMESLQQQVD KIGTGVQAGLNVLYDRQREAGAHLDHLDADDYPEN >gi|148337405|gb|DS264454.1| GENE 357 386248 - 386742 336 164 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 5 150 7 151 164 134 48 1e-29 MTIAVCPGSYDPVTAGHLDVIERCARFFDEVHVVVAVNAAKTPMFSEETRVEIIRQALAK RGCTNVKVASTTGLITDYCTKIGATVIVKGLRQNGDYEAELGMALVNRKLAGVETLFLPA APDLEHISSSIVKDVARHGGDVTGMVPDCVIPLLGEALKNEKRA >gi|148337405|gb|DS264454.1| GENE 358 386898 - 387215 384 105 aa, chain + ## HITS:1 COG:no KEGG:BAD_0227 NR:ns ## KEGG: BAD_0227 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 105 1 105 105 205 98.0 4e-52 MAFAIFDGLFGSDDPVSPLSNPDAGTGTAVLERPEEETKLDDGGNGDADRFAHYVSRDRI AESKMTGRPVVALCGKVWVPKHDPTHYPVCPDCKRIYDEMMNSSF >gi|148337405|gb|DS264454.1| GENE 359 387402 - 388724 1940 440 aa, chain - ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 5 435 13 437 446 363 48.0 1e-100 MLDYSPALMTDMYEYTMLDACLKDGTANRKCVFEIFTRHLPLGRHYGVAAGQGRILDALE KFHLDDNDLKFLADRKVVSPETIKWLENFHFSGSIKGYREGEMFFPNSPILQVEGTFGEC TLLETLLLSILNYDSAVASAASRMATAAKDRPCMDMGGRRTNEWAAVAAARAAVVGGFKG TANLLAAQMYGLKAIGTAAHCFTLVHDDERSAFESQIAALGKNTTLLVDTYNIEEAVKTA VDVAGPELGGVRIDSGDLASLAQRVRNQLDALGATNTKITVTNDLDEYALASLQTAPVDS YGVGTMLVTGSGAPTCAMVYKLTERENSAGEMQPVAKKSKDKATVPGRKLAFRSYEYSLA DCEHVISGSEDKLAAYQPEDGWKNLLVDYVTNGENHSEYQGHDAIVNAHNYRAQALAELP IGAQSLMKGDPVIPTEVTVL >gi|148337405|gb|DS264454.1| GENE 360 388948 - 389694 1126 248 aa, chain + ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 1 247 14 258 258 281 61.0 8e-76 MLGDQTVVRADGRKVDELRPVRITRHFTDVPEGSVLIECGNTRVMCTATFTAGVPRWRKD SGLGWVTAEYAMLPRATADRTDRESVRGKIGGRTHEISRLIGRCLRGVVDMKALGENQVQ IDCDVLQADGGTRTASITGAYVALVDAMHWAEEHKHVKSADRVLKDWVSAVSVGVINGKP MLDLPYIEDSQAMTDMNVAMTGSGDFIEIQGTAEHRPFNRAELNTLLDLAEKGNRELQAA QRAALALD >gi|148337405|gb|DS264454.1| GENE 361 389816 - 390496 394 226 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15803493|ref|NP_289526.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Escherichia coli O157:H7 EDL933] # 2 221 3 194 197 156 41 2e-36 MKIIVATHNGGKLAEIRRILEERLGADAADIELVSAGSLGLPDPVEDGVTFQENALIKAR DVAERTGCPAVADDSGLIVDVMGNAPGILSARWAGEHGNDKANNALLLKQLADIPDSKRT ARFRCAAALVVPGERKADGADDDKPYTIASETVEVGEMPGVLLRAPRGANGFGYDPLFVP NDQPQRAVDAGEKLTSAEMEPAEKNAVSHRGKALRALVASIEALVK >gi|148337405|gb|DS264454.1| GENE 362 390882 - 391544 266 220 aa, chain + ## HITS:1 COG:TM0229 KEGG:ns NR:ns ## COG: TM0229 COG0679 # Protein_GI_number: 15643001 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Thermotoga maritima # 13 133 6 125 285 59 32.0 6e-09 MSTLIQPIALLAIILTGYLFKRAGKFKNRDYRIMQVALFNLVLPCAIIYSFATNPHDSSM LWISVFGFVVAFIPPVLIFLTTRHTPVQDRAFTMLNGSGFNIGCFCFPVVQAFLGTAAIV PAAMFDIGNCVMVAAGTNVMTHDPTAHPARQDAGRAVPGERSGAAVREAQGQGRPQARPP RAATQRGERLLRLHPVRHLPGHDRAHACQCEDPRRRGHVR >gi|148337405|gb|DS264454.1| GENE 363 391306 - 391890 798 194 aa, chain + ## HITS:1 COG:L181807 KEGG:ns NR:ns ## COG: L181807 COG0679 # Protein_GI_number: 15673902 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Lactococcus lactis # 41 184 89 232 238 62 25.0 7e-10 MTLLHIQPGKTLGEQYQGNAPVLPYVKPKDKDARRLARHALLRNVAKGFFGSIPFDTYLV MIVLMLANVKIPAVVATFVEPLANANSFVAMLMVGMLMDLPAGRDDVMKLLKIIELRLPF GLLFAVCAWFVLPFGANVREAVVMCCLAPIAVFSTLFTDEVLGNAKLAGFSLSVSAIIGL VMMTGAHFLLAAIA >gi|148337405|gb|DS264454.1| GENE 364 392235 - 393932 2814 565 aa, chain + ## HITS:1 COG:MT0972 KEGG:ns NR:ns ## COG: MT0972 COG0166 # Protein_GI_number: 15840369 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 563 1 549 553 652 57.0 0 MAINPPVDATKTPEWAALQKHYDELQSEGISLKQWFADDAERVEKLSFDAGDLHFDLSKN LIKPETLQLFADLAKAVKLDERTKAMYTGVHINNTEDRAVLHTALRRPVEDEGKYIVDGQ DTVKDVREVLDRIYAFADKVRSGEWTGVTGKKIETVVNIGIGGSDLGPVMVYEALKPYAD AGISARYISNIDPNDLAEKTKGLDPETTLFIIVSKTFTTLETLTNAREARTWLLEELKAK GAIDGSDAKNAEAIKKHFVAVSTNLEKVAEFGIDPNNAFGFWNWVGGRYSVDSAVGTSLA VVFGPARFEEFLHGFHEIDEYFANTPFEKNVVVLLGMLNVWYRNFFKVASHAVLPYDQYL HRFPAYLQQLTMESNGKSVRWDGTPVTSETGEIFWGEPGTNGQHAFYQLIHQGTQLIPAD FIAFVNTPNPTKDGDQDVHELFLGNYFAQTKALAFGKTADEVRAEGTPEEIVPARVFTGN RPTTSIFGVALTPFALGELIALYEHITFVEGTVWGLDSYDQWGVELGKQLAKQITPAISK DDDALAAQDPSTQSLIKFYRANREF >gi|148337405|gb|DS264454.1| GENE 365 394211 - 394612 661 133 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025250|ref|YP_909095.1| 50S ribosomal protein L19 [Bifidobacterium adolescentis ATCC 15703] # 1 133 1 133 133 259 98 3e-67 MRRYAAATRGNTMVNAIEAFDAKHMKPAEEIPAFRPGDTVEVNVKIKEGNNSRIQAFTGV VIARQGGGVRETFVVRKISFGTGVERRFPLHSPVIDSIKVVRKGRVRRAKLYYLRNLRGK AARIVERRDNSEK >gi|148337405|gb|DS264454.1| GENE 366 394731 - 395378 875 215 aa, chain + ## HITS:1 COG:alr2975 KEGG:ns NR:ns ## COG: alr2975 COG0681 # Protein_GI_number: 17230467 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Nostoc sp. PCC 7120 # 15 199 20 190 190 92 33.0 4e-19 MKHARRRVESEESFGLRDTLIWCGIPIVIVLLVRMFLFGFYVIPSGSMLNTIEPGDRVIT SKLTPKVFKLQRGDVVVFKDPDHWLQQENSGRFGGDYLIKRLIGLPGDTVACEGPGKPVT VNGVAIDETSYIRSGVDPSSFAFSEKVTAGHVFVMGDNRANSADSRYHQDDSSHGLVPVS DVVGVGLVKYWPLNHISTLDAHHDVFRDVPEGSAD >gi|148337405|gb|DS264454.1| GENE 367 395378 - 396094 697 238 aa, chain + ## HITS:1 COG:CAC1762 KEGG:ns NR:ns ## COG: CAC1762 COG0164 # Protein_GI_number: 15895039 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Clostridium acetobutylicum # 19 235 65 249 254 103 36.0 2e-22 MSVSIVPTLDMERAIAASGYDVIVGFDEVGRGSLAGPVMVGAAAIRTCDLAGSSPLQVPD GVADSKMLTEHRREAIFEELKSWCASWAVGSASNTEIDDWGISYALGIAALRALGQAEEK LGIDGDGMLDGKPVKVGAILDGPNDYITKALNTFDAPDVPVPAEVSTKVKGDRYCATVAT AAVIAKVTRDRLMVELGAQPQYEPYEWAHNKGYGSAAHRDAIAEFGPSDLHRLSWHLV >gi|148337405|gb|DS264454.1| GENE 368 396223 - 396948 289 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 208 1 199 223 115 33 4e-24 MEHILHATDLVMDYSTQQATPNATHMLALNHVDFGIQAGESIAVMGPSGSGKSTLLHALA GIITPTAGNVMFRGANLARLSDADRTKLRRSAFGFVFQSGQLLPELPAIENIALPMMLGG ASYQQATDTAMLWLERLGLRQLAQQRPGEMSGGQMQRIAIARALAAQPAVIFADEPTGAL DQTTGHEIMSILMRTARQTGAAVVVVTHDSNVAAFCDATVTMRDGRLSSPQQSQPTAGGA R >gi|148337405|gb|DS264454.1| GENE 369 396945 - 398450 1306 501 aa, chain + ## HITS:1 COG:no KEGG:BAD_0236 NR:ns ## KEGG: BAD_0236 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 501 1 501 501 840 99.0 0 MNMFRLWRLFHRSGTRGTSSRTSALAIVAFASATAVFLTVLGGLHGFIWRASADHTFGCM INSNRCAPGTYETWSKTLAHADKLVATVGDGHWTADQATAVMNTYSDGYVLLAAFASLLL IVPFVALAGSAARLAASRRDARLAALRLAGATTAQVTKLTALDAGGQALLGALVGMAGYF ALIPAIMLLDFQNQHFTFEQLWVGLPALAAVTVGVTLLALVSALVALRRVAITPLGVTQR TGQPMPSAWRALIFLAVLAVGYLLLNSVSAFAHLGQMVVYAIIFGVFFLGFAMVNVVGTW VVAMRARSRAKHPKDAATMIAMRRILDNPKRAWRNVSGVALAVFIAGMTSVCGLLATGIG GNHDPFDPSMLYMRDIAMGGFLTLAFAAVLAAVSSGVMQTGNVYDQADEYRMLALEGTDE ATLDKARMMEVITPLNTVMAVSLGCSVLLLFPILATSLLNPASLLTLAAGIGLCYALMVL GGCAANHAAHGLGYAGYRMDD >gi|148337405|gb|DS264454.1| GENE 370 398498 - 399442 1359 314 aa, chain - ## HITS:1 COG:Cgl2261 KEGG:ns NR:ns ## COG: Cgl2261 COG0679 # Protein_GI_number: 19553511 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 10 308 7 303 309 159 36.0 5e-39 MPGLLSAMEGFCVIGIVIATGYVAARMRIGGPTAQMVLNRFSFFVSSPCLMFAILSKEKI FEIFHSSIVVAFFSAVLVGVVFLILNRLFFHMKAADATIGALNSLYLNSNNIGLPIATYI LGNPALVAPILVMQQAVFTPIGLTVLDVTTKGKVSAKEILKQPLHQPLLIGSLLGIAVSA ISAEVGFFVIPSCIYDPINMIGNSAVPMILMAFGMSLHGTKPLQDKSNIPAVFTVAVLKN IVMPIIAFLLSYFVMGFRGATLYACVVLAALPTGQNVYNYAARYNVGLSFARDGILFSTL SSPIFIAIIAVLLG >gi|148337405|gb|DS264454.1| GENE 371 399580 - 400776 1524 398 aa, chain + ## HITS:1 COG:MT1240 KEGG:ns NR:ns ## COG: MT1240 COG0624 # Protein_GI_number: 15840646 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 20 397 10 352 354 274 43.0 2e-73 MNELTIGFSASATKQEQLSELMEQIMGAYSVSDDEGPLTDAVEVFLKKQPHLTVRRHGDT LVASTDFGRERRVILAGHLDTVPVIDNFPPKWLQPGDPLIREDVAAGHEHERVIWGRGAT DMKGSDAVMLYLAATLTDAKYDLTYVFYDHEEVAAEKNGLRKVVESHPDWITGDFAIIGE PTDCGIEGGCNGTMRFDVITHGVAAHSARAWMGKNAIHAAAEILNRLNAHENRAIEVDGL TYQEGLNATLISGGKGTNVIPDECRVHVNYRFAPDKSLAEAKALMIGADAGAKLGNGEHQ ATGGVFEGFGIEMKDESPSARPGLNSPLAQSLVSLVKERTGRDPLAKLGWTDVARFAILG IPAVNLGAGSPLLAHKQDEQLPETDLLLMADLLEDWLR >gi|148337405|gb|DS264454.1| GENE 372 401193 - 403991 2987 932 aa, chain + ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 235 932 146 810 924 473 46.0 1e-132 MPTTNEGLDQVEAVVSSDNSTNNAASSAGSVSADPAPRRRRGGRRVVRGVGAAGASLELK VEEHAKAPLFEEPKLEHAQPARDSADFNDADDTEPSRPRRRRVTRYDDDDEMRDERPRRR RRSSVDVQDEDDRPSRRRRRIIDESRDDRDDRDDYGNRGNRDESSEDRALDAVSALPEGH ETRHNPRPMTSLLFQEPILPAAPAGRGSSDDDDADDTGRRGSDDARDSRDGRDDDRPTRR RRRRSHDTADTDRTDASNDGRGRDDGNDRNNDAEDDEHGDSRRSRRSRRLNAQERRAAAE VEQIEEDLVLDGITYAPIDDESRNGNDDDDEQPTRTRRRRRGRGNHEEADEQQTSERESR RRHEDDDEEEGTVTRRRRRRRGGSKAEESDETMSRRSRKQQYIDEITDVEGSTRLEAKKQ RRRDNRRERSRQNQLMEQDFLARREHVERLMVVRERERHTQISVIEDNVLVEHYVSDIQE VATVGNIYLGRVQNVLPSMEAAFVDIGQARNGVLYAGEVNWDSARLEGQPRRIELAFKSG DPVLVQVTKDPIGHKGARLTSQVTLAGRFLVLVPSGGMTGVSRKLSERERARLKNIVSKI APKDMGVIIRTAAEGASEEAITKDLENLVRQWERITAKRDEFLHGKRPKLLQGEPDVAIR VVRDIFNDDFSKMIVEGDRVYERIEEYLDTMAPDLKDKLEKWDPAEHDGKDVFDKWQIDS QLRKGMERQVYLPSGGSIVIDRTEAMTTIDVNTGRFIGRGKSLEETVTRCNLEAAEEIAR QLRLRDIGGMVMIDFVDMVMPANRDLVLRRLVECLARDRTKHQVAEVTSLGLVQMTRKRI GQGLVEAFSEECPTCKGRGFILHDEPTVSADYDDPYALKGGDPFVKTNKHGHGTDVQVPK GSSPDVKAKLAQIAAAAVAANNADLGEEEQEE >gi|148337405|gb|DS264454.1| GENE 373 404136 - 404444 467 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227507812|ref|ZP_03937861.1| ribosomal protein L21 [Gardnerella vaginalis ATCC 14019] # 1 102 1 102 102 184 92 8e-45 MYAIVKAGGHQEKVEVGDVILVNRLDAKKGDTVEFPVALVVDGDKVTVNAKDLANISVKA EVVNDEAKGPKISIMKYKNKTGVARRKGHRQQLTLVKITAIA >gi|148337405|gb|DS264454.1| GENE 374 404484 - 404735 424 83 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025259|ref|YP_909104.1| 50S ribosomal protein L27 [Bifidobacterium adolescentis ATCC 15703] # 1 83 1 83 83 167 100 8e-40 MAHKKGASSSRNGRDSNAQYLGVKKFGGEAVVAGNIIVRQRGTKFHPGENVGMGKDHTLF ALKDGSVKFGVRRDRKVVDVIAA >gi|148337405|gb|DS264454.1| GENE 375 404814 - 406505 2418 563 aa, chain + ## HITS:1 COG:Rv2440c KEGG:ns NR:ns ## COG: Rv2440c COG0536 # Protein_GI_number: 15609577 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Mycobacterium tuberculosis H37Rv # 1 511 1 476 479 429 52.0 1e-120 MSDFVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGDGGSVIFMADSNANSLLDY RFMPHREAESGTMGLGDTKDGSKGADLILPVPVGTVVFEAKGPQGKPKHPGEQLADLRHA GDKFVVAAGGNGGLGNAALANRTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG KSSLIAAMSSAKPKIADYPFTTLVPNLGVVVAGDMRYTIADVPGLIPGASQGKGLGLEFL RHIERTEIIAHVIDCATLEPGRDPMSDYQALEHELAEYAGKLELPLGAIPIPERPRIIIL NKVDVPEAKELAEFVKPEFEKLGLKVYIISTASHEGLKELNWALADLVTNMRAEVAKREQ AEEEARVVIKPLEEPRNRRRRNDEGGNALDFTVERKENGNGEVWYEVLGTKPERWVMQTN FDNDEAVGYLADRLAKLGVEDELRHKGAKPGDEVRIGRGDRAVEFDWDPTIAAGAEMLDG TQLGARGVDLRLQESDGRAQRRSNTERRRQYHEMMDARQAVREAMMAERKAGHWADPSVD DDRHDETSLFGRGETADDEDVEQ >gi|148337405|gb|DS264454.1| GENE 376 406588 - 407721 1416 377 aa, chain + ## HITS:1 COG:MT2515 KEGG:ns NR:ns ## COG: MT2515 COG0263 # Protein_GI_number: 15841961 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Mycobacterium tuberculosis CDC1551 # 10 377 6 368 376 259 46.0 9e-69 MNTPSQAQVRRAIAEAQTIVVKVGSSSLTEPSGHLDPQRLNALVAAIARVRLMGGRVVLV SSGAIAAGFGTLGFDKRPTDVADQQACAAVGQGLLMAQYEAAFARYGLRVGQILITVSDT IAPQQYRNVRRTLDRLLDLGAVPIINENDSLASNEIRFGDNDRLSALIANIVVADALVLL TDVDALYTAPPSEPGSKRISYVPNVEDALAKVQVGGTGSNVGTGGMVTKMEAARVAAVSG IPAVLTCASNAGPAMMGDPVGTAFAPINDRGSSRRLWIGFASHPQGTLVADSGAAKAVRG GAASLLAAGVVEVKGDFAAGDAVWVDDEQGNHLAKGLVGFDSEEIPQMLGRNTAQLKRFL GEEYAHPLVHRDNLVLV >gi|148337405|gb|DS264454.1| GENE 377 407845 - 409053 1691 402 aa, chain + ## HITS:1 COG:aq_1969 KEGG:ns NR:ns ## COG: aq_1969 COG0436 # Protein_GI_number: 15606968 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Aquifex aeolicus # 7 402 5 393 394 347 44.0 2e-95 MADWQTLSDRINHVAPSATLAVDSKAKAMKAAGIDVIGFGAGEPNFPTPAPIVAAAAAAV QDPKNYRYTPTAGLPELRKAIADKTLRDSGYEIDPSQVIVTNGGKQAVYESFQILLNEGD EVIIPTPYWTSYPEAVKLAGGVPVTVFAGADRNFEPSIEDIEAARTEHTKAIIVNTPNNP TGAVWKPETVKAIAQWAIEHHVWVISDEIYEHLNYDGAKTTYIGAAVPEVRSQLLVLNGV AKTYAMPGWRVGWMIAPVDVAKAASKLQGHMTSNVNNISQRAAIEAVSGSLDAVYEMRAA FDKRRQTIVAALNDIEGVNCPTPTGAFYAFADVTALLNKPLGTNKTTFANTSELAAALLD EGHVAAVPGEAFGAPGYLRFSYALADDDLVEGMRRMKRWVED >gi|148337405|gb|DS264454.1| GENE 378 409418 - 409645 417 75 aa, chain + ## HITS:1 COG:no KEGG:BAD_0245 NR:ns ## KEGG: BAD_0245 # Name: secE # Def: preprotein translocase subunit SecE # Organism: B.adolescentis # Pathway: Protein export [PATH:bad03060]; Bacterial secretion system [PATH:bad03070] # 1 75 1 75 75 125 100.0 4e-28 MAKAKNSEKAIKPNIFMRIGLFIKQIIDELRKVVTPTSKELFFWSLAVFIFVLLLMALVT GMDYGLGKLTLWIFG >gi|148337405|gb|DS264454.1| GENE 379 409670 - 410494 1297 274 aa, chain + ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 83 273 32 228 228 153 46.0 4e-37 MTDEVFSDNLDEASKADTEAAAAVEALPAEGEAVQAVAADQATDGQAQSEQDAPEEQTAE TTEDEDTEQDAGAKAVEEFSKSLRTLEGKWYVLHTYSGYEKRVKTNVESRVASFGMEDKI FQVEVPMEEVEKHTEKGKKVITRVRVPGYVLIRMLPDENARRIVRETEGVTGFVGPTKDP APLTRKEVVSMMAPMIASEALKAAGDKPAAAKKRKLEVSYAPGDQVTVTDGPFTTMAAVV SEVDPSTQKLTVLVSIFGRDTPVELGFNQVEKLA >gi|148337405|gb|DS264454.1| GENE 380 410839 - 411270 714 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025265|ref|YP_909110.1| 50S ribosomal protein L11 [Bifidobacterium adolescentis ATCC 15703] # 1 143 1 143 143 279 100 2e-73 MAPKKKVSALLKLQIQAGKANPAPPLGPALGSHGVNIMDFCKQYNAATQDKMGQVIPVEI TVYEDRSFTFILKTPPAAALLKKAAGIQKGTENPLTHKVGSVTKAQVREIAEIKMADLSA RDVEAGMKIIAGTARSMGITVTD >gi|148337405|gb|DS264454.1| GENE 381 411285 - 411977 1157 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025266|ref|YP_909111.1| 50S ribosomal protein L1 [Bifidobacterium adolescentis ATCC 15703] # 1 230 1 230 230 450 100 1e-125 MVQRSKKYREAAEKIDRNNLYTANEAIALLKSMPEYKFDQTVEAVLRLNVDPRKADQLVR GSVNLPNGTGKTAKVLVFARGPKATEALEAGADIVGDDDLVQKVADGFLDFDSVVATPDM MGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKGGKVDFRVDKNGNLSFLIGKMSF TEQALDENFKAVADEVKRLKPSTVKGRYVTKATITSTMNPGVPVDPAVVA >gi|148337405|gb|DS264454.1| GENE 382 412125 - 412904 782 259 aa, chain - ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 16 256 164 408 414 103 31.0 4e-22 MNSEQADILDLLSGHTDDTTIERLAFECLLTNMTDDRVVSLMNILGWQGDFNCFAIGGVP SASLASTSLAIRKAVRDLGGEHVVIGTYGTFLLALACQMGAVTPEVTCTAVMPAFSEDEP LYLSPVRSGVAGASHALRETMFSLQAAPALSTPSRPLRADELLPERALLGDDYAREELYR NVYQVLRGENPDDPTYLTVSTFLKYGSSLENTAKELNVHPNTVRYRLKRAAETTGWDATD PRDAYVLTTALAIGRMRDR >gi|148337405|gb|DS264454.1| GENE 383 412997 - 415168 2302 723 aa, chain + ## HITS:1 COG:no KEGG:BAD_0250 NR:ns ## KEGG: BAD_0250 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 698 4 701 701 1331 99.0 0 MSENKKAGKADTFLSWTLGVLACLWVAWCCGIGPLYWFGTGLADFGWANVLYMAIAFVVS FAILRSLVRYGRGERVLPTYFSRRYVKLCQEVSGTPTTVLGIMLHHLSDAAHSRPGRAIH AVIVWIGRKLTRCTDCWWKLMLLFVIGWLWIPTTLLAAYGADIRSQIREFSWALNQWTGL KQPYIGFFSFVPMDIYPTAHYMWPANPTYLTDQHNIVLTVFYGAFAAVSRYFTDSNDAGI VALAALQWLFAAFCCAATANRFFNLPWRRLGVGTFDFSHPERHDCWNMRDFTHPEAGVVA RPSRLRAGAKTRFVILLFFMVCPLAVFATISLTKSPLFAFAFVWWFGVWYELHMTHIKAL PTINGKPMKLRKRSLAALFMSSCVMLISAKYAWYIILFAALLAIINDRKRWKTYVVALML PTVLIHGGLVYLVNSGAVIGGDPIESRGIQLQQIARVAKYNPQGIPEDAAKKLAPVFNLD QMAESYFQQDADPVKSSGIQSKKVSYKWRTVTKDDMKDFNDAWWQIVKANPQIALDALFA ECFGYFNVTDLPYVSMDYYVNNDYVQSDNEWIHLYNHQWRNQVAGFAKKWGQIPVLGWVT HGNLYVTLTLLIGAAEVVLRRWRSLSWHLPLLLLMGVMITAPANNFERHMLPIAFVFGFL CLEFWRESRAARLAAREASYVVTSTAGKRRIGGRRIDRQQSDKQDADERYLDGRQLDGQE KES >gi|148337405|gb|DS264454.1| GENE 384 415165 - 416115 842 316 aa, chain + ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 45 311 37 263 269 73 26.0 5e-13 MTTILDSALTMPRTCVAADQVIALDSVGSTNTYAAELVRKGALFGSTSRDGLDGCDGRDW TGREIVAICADEQTAGRGRLDHQWTSAVGESFIVSLVVSVPTAIVRDTSVNGWLQMIAGC EARNAIIAAIRDCGGPLGKDIVLKWPNDIFVDGKKLGGVLAEMVPLAATPIADGTTGTTD VAAATERVGIVFGIGLNLAVPEDHLPTDKATSLQLVAHGLPDSMTLRDMIAAHLVDGLRS RLADFEADPQREATRAMEEMRPVCWTLGKPCEAHFVDGTTLRGTALELNPDASLTIRDDN GNLHTVRTADVGVLPQ >gi|148337405|gb|DS264454.1| GENE 385 416530 - 417123 893 197 aa, chain - ## HITS:1 COG:FN2003 KEGG:ns NR:ns ## COG: FN2003 COG1268 # Protein_GI_number: 19705299 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 19 196 2 174 182 74 34.0 1e-13 MRNAILTISSAAKTATSGKFGAVLKSTLFAVLLAAASMAGAVPIPGTPVPITLQTFVVML AALMLPWKQAGAAVLMYLAAGAAGLPVFAGGASTMALVGPSAGFLIGFLPAAVVTSLLKG KARVDSPKHAALTAARYLFACVAGCIVLDYLLGFIVQSAITGVAMPVVAIASMGFIVGDC IKAVVASLVASGLAKLQ >gi|148337405|gb|DS264454.1| GENE 386 417319 - 419223 2443 634 aa, chain + ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 3 606 6 590 591 458 43.0 1e-128 MPKNVNKLLVANRGEIALRVVRTAREMGIPTVAVYAEQDRHAQYVQMADDAYLLSGDTYK DTYLNEDLLIDILQRSGADAVHPGYGFLSEVASFAQKVLDAGATWVGPNPKALVDLGDKI TARRVATFAKVPPVPGISQSISDMRLLLDFAHTHGYPLMLKRTDGGGGRGITLVHNDDEL RGFYMNHDALQGGDLDEYFVERFIDKGRHVETQCGRDSHGNFTVYSTRDCSVQRRNQKLV EEAPAPFLSDGVLEQLETYSRRLFEAVDYIGLGTCEFMVTEQGKVYFLEVNPRLQVEHTV SEEVCGLDLVREQLTIANGGELTVDHPLRGHSFELRLTCEDPAKNLAPSSGTLTSLKWPS GPGIRVDSGVVEGDTISPKFDSMMGKLVVTASDRAAAVARVRRALAELEVQGVPTPASLF EQIFNDDEFTAEHGVAYDVSTKWLERKYLNKEASSTKGGQPASMAGASGAKEAEQKESSE TFVIEVNNHRVSLTVPNDIVANLTGGAKARDAKRAIQPLRGQGLHHVEKKQQGNDGQSGV IASPMQAVVTRINVAEGQEVAKGDLLVVLESMKMENYVYAPVKGTVTKIFVGPAAGIEAG ETLMTIDVNGASKAADGKPATDGNTETKTEGGAK >gi|148337405|gb|DS264454.1| GENE 387 419220 - 420866 2145 548 aa, chain + ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 59 548 28 515 515 493 51.0 1e-139 MTDIIASPAVKEAVKVVMEQQERLGDEAAAEARESQPIRTSVLRAAQLAAEAEDHARGRQ HVKGKLTARERLDLLLDAGSFEEIGRFRGGDINGGRAGSAVITGFGEVFGRKVAVYAQDF SVKGGTLGVAEGRKICHLMDKALDLKVPIIALIDSGGARIQEGVAALTEYGHLFRKTCDA SGFVPQLSLILGPCAGGAVYCPALTDLIIMTRENSNMFVTGPDVVKAATGEVISMDDLGG GYVHNATSGVAHYLGEDEADAIDYARTVLAYLPSNSDQQPPVYAYAATRADRDVAKRLAT IVPDNDRQPYDVLDVIRCIVDYGEFVQVHELFAASAVVGFACIDGHPVGIVANQPNVNAG ILDVDSSEKVARFVRLCDAFNLPVVTLVDTPGYKPGAEQEHAGIIRRGAKVIYAYANAQV PLVTIILRKAFGGAYIVMGSKSIGADMNFAWPSSQIAVLGAAGAVNIIHRKDLQKAKDNG KDVEALRAKYIADYERTTVNANLSLEMGEIDAMIDPEQTRETIIESLRLLASKKRVRRTS KHHGNQPL >gi|148337405|gb|DS264454.1| GENE 388 420941 - 430276 12728 3111 aa, chain + ## HITS:1 COG:Cgl2444_5 KEGG:ns NR:ns ## COG: Cgl2444_5 COG4982 # Protein_GI_number: 19553694 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier protein] reductase # Organism: Corynebacterium glutamicum # 1796 2623 51 843 843 685 50.0 0 MNTFFLDRLNSEPHALAFAGQSTPWPVALADQSANPALDEALHTHAAAAQALLYPVSAEL LATTGRPVDLFGFEPNPARLGAAAAASASVPGIALTQLGALLDAAALGYNPAQAKPVAVL GHSQGVLAVHMVQAICEAGSIDAAAAKIDEILAIATLIGVAGTRQARQLGLAARHGEATP MLSVKDITRAQVDALIERVDGARGPIAVAVTNSATHYVLSGYPEDLAAFGVEVAKEHKRQ AKLREEKVRGGRVFDPTLEYLDVTLPFHSPLMADAVSQAVAWAEACGINADHARELAAEV LLNHVDWAARVRALMKSTDPSALWVLDFGPGNTVGKLFSTVAQGTGVGVVEASTVADRGA LSTLETLPERTQNWTRFAPSIIHTSAGDKVRTAFTELTGKAPVLLAGMTPTTVEPEIVAA AANAGYWAELAGGGQVTASVFDRHVAKLEEELEEGRTVEFNAMFMDRYLWNLQFGSQRIV PKKRASGTPIDGVVVSAGIPEFDEAVELIHNLNADGFPYVSFKPGTVDQIRQVVRIAKAV APTKVLIEVEGGSAGGHHSWESLDDLLLSTYAEVREQSNLVLVVGGGIGTPERGADYITG EWATEYGRPLMPVDGVLVGTAAMTAKEAHTSHEVKQMLVNTPGIPAKGDGNDPFAPLGEQ WVPSGQAKGGVTSGLSHLHADIYELENSSARCGRLLVRVMKHPEELESRRDEIIAALNAT AKPYFGDLKTMTYLQWAQRFADLSFPWVDETYADRFLHLLQRIEARVTTQESGEFASLFA SRADVEADPNAAIAKLAETYPQAGKLTVTPMDEAWFPVLVREYPKPMPFVPVIDNDLLRW WGQDQLWQSEDSRYSADSVRIIPGPISVAGITTVDEPVADILGRFEAAMVKRVSAESASA DKTAFAQLGAAVSAEEFIRKSPNISWVGHLMANPAYGTANGDANYEIRKVAVEGSVEKYD LDIHLDTFWDNDPDGGASKHAVRDIVIPLNVDGNESGLFPVVDRDRLPEHVYRMLADTAG IGNTAITGDKLTAMPQIEEVSDKTAFPFGQAHTGYTLSANLGFDHEAATGGALPSDLVPS RIAPDALVGPAWPAIYAALGSVYVNGFPVIEGLLNAVHLDHLIELEVSEDELLKHTGERI ELTSWADDYFESASGRVVTIHVTHTAQDGTLLANETERFAIRGRAYSDALPPEAPDYGGI EAEIESTPRRLLRRVKVVAPHEMTAFARTSGDFNPIHTSHRGAAVSGLAAPLVHGMWLSA TAQYAVQALDEKGAHYEIAGWTYNMYGMVQLDDEVEISIERVGRVAHAGMVLEVTSRIDG NIVSRGTAIVRAPKSAFVYPGQGIQKQGMVLDERAKSPAAREVWERADKVTREKLGFSIL AVVRDNPKELTANGVTYRHPEGLLNLTQFTQVALATVAFAQTARLREAGADIWPAYFAGH SLGEYNALSSFAGVIPLETVLELVFHRGSTMHHLIPRDEKGRSNYRMGALRPNQFGVGDD GVREYVESVSKASGEFLEIVNYNLAGQQYAVAGTIAGLKALKADSARRVAEYGGKPAFML VPGIDVPFHSTLLRKGVPEFRDKLDALLPKHIDYRGRLVGRYIPNLVAVPFEMTKEFAAK ILEVVPSERIKAALDDPKVWDSYAEDDQKLGRLLLTELLSWQFASPVRWIETQALLFGSA EQGGLGVEEYVEVGLGNAPTLANLGAKTLRLPQFAGRDVTVYNVGRDEGRVYMTDSDSLV ADDDADDSVAAPAAASAPAVAAAAPAAVAAAPVAAAPAAAAPAAPAGAPSGAAVADIPFN ASDAIAMLLAYSAKVRPDQIGESDTTDTLTNGVSSRRNQLLMDISSELGVASVDGAAEAT VKALSALVDKVAPNYKAFGPVLSDIVRDRVRGLFGAAGVKLGQITKRVTDTWQLGEGWAS HVVAALVLETREGASSRGGDLASLSTEAASNAAAANALIDAAVQKVASDKGVAVAMPSAG GAAGGAVVDSAALDAFAAKVTGADGVLASTAKFVLNQLGVTASVADDSADENAAVVAAVE AELGSDWPKQVEPRFDERKAILFDDRWASAREDLSRAYYDNDASALDGSFIGLGKAVADE AAWYAGKTADAELAAAFKRVAGEALEQTNDSAEASRFAGDIAVVTGVAPNSIAAQVVNGL LAGGATVVATSHSFRQSVKAWAKQTYREHAAGDAKLWLVPANLSSYRDVDALVAWVGNVQ KKTSGATTTILKPAYEPNLFFPFAAPPVHGTLADSGELFESQARLMLWGVERAITGFAKI GADTDVQHKLHVILPGSPNRGVFGGDGAYGEVKSAFDAIVNRARAEKVWSSRVTFAHPKI GWVRGTGLMGGNDPLVEVVERHGLKTYSTAEIAVKLLELSTKESREQAVKAPLDVDLTGG LGSEPIDIKALRAEAMEDAAKAAAAEAGDEDKQGDCAAAATLIKALPSPRAPRQAKVDLK DWQHVTARPEDEIVIVSIGELGPWGSGRTRFEAELGIHSDGEVDLSAGAVLELAWNMGLL TWNDSPKPGWYDTDGNLVPEEDIAERYHDEVVARSGVRPFEEGMGNDYKDGADEEEAEVF LDHDVTFSVPTREIAEEYVKLDEAHTSYAADAESGEWNVTRHAGSMIRVPRRAAMTRTVG GQFPKGFDPVKWGIPASMVGDVDKIALWNIVTTVDAYLSAGFTPAEILEAVHPSMVASTQ GTGFGGMASMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSYIGGYGNMIQPVSACAT AAVSLEEGADKIALGKADFVVTGAIDDIGVESVIGFGNMNATANSEEMYAKGIDARFFSR ANDRRRGGFVESQGGGTILLTRGDIALKLGLPVAGVVGFVHSYADGAHTSIPAPGLGALA AGMGGKDSKLVQDLAKLGVTPDDIAVVSKHDTSTNANDPNESELHNTLAHAIGRTDGNPL FVISQKSLTGHAKGGACIFQVNGLTQLFKSGVVPANAALDCVDPKLKRDDHMVWLREPLK VGSVKAGLATSLGFGHVSGFAAIVNPGAFEASVANIAGEDALNEWRDRANARLAAGQRRL EEGMMGRAALYEPIDNRRFHEDGRGYDAHEVEKAMLLDPNARLASTGYFEA >gi|148337405|gb|DS264454.1| GENE 389 430435 - 430893 455 152 aa, chain + ## HITS:1 COG:Cgl2440 KEGG:ns NR:ns ## COG: Cgl2440 COG0736 # Protein_GI_number: 19553690 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Corynebacterium glutamicum # 1 152 1 134 135 74 34.0 7e-14 MLGLGHDVVDVPAFTKQLNEPGTRMRNLFSMREIWQTAQRSQLKHDDEAVHLAARWAGKE AFLKAWCAAISRHAKDGAEVAYPYTLDNFPWVRIEILDDSHGVPRVILSSEVQRKVQQSL GLPLDPVRQSYDISISISHDGPIASAVVMLEI >gi|148337405|gb|DS264454.1| GENE 390 431199 - 431876 917 225 aa, chain + ## HITS:1 COG:no KEGG:BAD_0258 NR:ns ## KEGG: BAD_0258 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 225 1 225 225 363 98.0 2e-99 MGQKERNKATEVVDGVVETVDVSKHPTASIEPSDLSLADIERRKSHPVRWILFMALVLLA MIAPYWWGRDIAVRDASWMVANLNFLDSKGVALISWTVTIVALTGLGLMVADAKKWLWGA IFVIGLAAEQFVAGMCLLSFNFWNATYVMYGEAAGLANAANLGIIAAGFGVAVYAVLWVG LLVCIKKESKLNVLTRSWASFLLFFAIELVALAVVLFGGLLTSMA >gi|148337405|gb|DS264454.1| GENE 391 432033 - 432302 449 89 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025277|ref|YP_909122.1| 30S ribosomal protein S15 [Bifidobacterium adolescentis ATCC 15703] # 1 89 1 89 89 177 98 1e-42 MALTAEEKQEIIKTYATHEGDTGSPEVQVALLTKRIADLTEHLKEHKHDHHSRRGLLLMV GDRRRMLDYLKRVDINRYRSLIERLGLRR >gi|148337405|gb|DS264454.1| GENE 392 432533 - 435211 1441 892 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 18 737 11 698 714 559 46 1e-158 MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ VVETVLAVNPDDAYDVVALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER AVFEIVVAGRVVENGDVAIAMIEAGAGKNAWHLIYDEGQTKPDEEVVAGGLEAAKPFIKV ICEAQAELKKIAAKETKEFQLFPEYTEDLYNRIDEIAHADLDEALSIAEKLPRQDRIHEI KEGVKATLAGEFTDMEDAEKDKEIGNAFKELQRQIVRRRILTQDYRIDGRGLRDIRTLSA EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE TGRVGSPKRREIGHGALAEKALVPVLPSREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS LLAAGVPLKAPVAGIAMGLVSGDVDGQHIYKTLTDILGAEDAFGDMDFKVAGTSEFITAL QLDTKLDGIPADILASALQQAKEARTTILEVINECIDGPAEMSPYAPRIITTTVPVDKIG EVIGPKGKMINQIQEDTGAEIAIEDDGTVYISSEGGEAAEKAKEIIDQIANPHVPEAGET YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD DRGKISLAIPGFEDQESSAPRRDRGDRDDRRGGRGRRDDRRRSDDRDDRDYDDRPRRRRS DRDDDRDYDDRPRRRRSDRDDRDYDRDDRRSSRSDRDDRDYDDRPRRRRSDRDDRDYDRD DRRSDRRRGSRRDDRNPRYAADENYDEYRADREERSERPRRRVRRDFDPFED >gi|148337405|gb|DS264454.1| GENE 393 435289 - 435708 137 139 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486676|ref|ZP_02028083.1| ## NR: gi|154486676|ref|ZP_02028083.1| hypothetical protein BIFADO_00497 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00497 [Bifidobacterium adolescentis L2-32] # 64 139 1 76 76 155 98.0 1e-36 MGSVPLDGLHEIRNEVGTLLELHVNLRPAVFDAVAQCDQTVVGGHSPQHYQDDDNECNNA EYHVKILASLLVYLSNFRMRATHFVVLSVFPCTRKSIDANIRTACRTYEKPTPYGVGFSL DYLSASLRRIREKTSVFEC >gi|148337405|gb|DS264454.1| GENE 394 435520 - 436080 860 186 aa, chain + ## HITS:1 COG:lin0961 KEGG:ns NR:ns ## COG: lin0961 COG1704 # Protein_GI_number: 16800030 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 186 1 185 185 175 50.0 5e-44 MIFGIIALIVIVLIVLWGVSAYNGLVTLRNRVKNGWAQIDVQLKQRADLIPNLVETVKGY AAHESQVFTQVTQARASALQAAQSGDVAQRIQAENQLSRAIMNLQAVAEAYPQLQANQNF LDLQGQLKGLEEKIAYARQFYNDVVQKYNTKIEVVPTNIIAGLFHFEQAAYFQVDEADRQ APQVKF >gi|148337405|gb|DS264454.1| GENE 395 436219 - 438441 2361 740 aa, chain + ## HITS:1 COG:FN1127 KEGG:ns NR:ns ## COG: FN1127 COG4907 # Protein_GI_number: 19704462 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 173 652 119 547 606 67 22.0 7e-11 MNIRRTLVSLLSTIVVTLTMLGIVLINAQTSDEEPDLSYRTLDYDVAVQRNGDLKVTQHI DMRLKDRGRDWKQMYQRYTLKSKNLTDISDIGVKDVSNGETYRQGDFVFPDNADNWNDEH AGRWYIVDVTEDENDPQPFNPQTDGLSDDGQADKTLEIGWNIPQTVSEDSLKFDVSMTLH GVSTAYDDVVSFQWEPFGEENQIPIGTVTGKVTFPNGINGKNSWAWLHTKNTSTTNRGDN GSLMFSANDVRAGDYLDVVAMFDASQAQGVARTKSGAYKQRLIDDETKQEREWRSSQHTK AVKRVAGWIFAALIGIALAVAALYFAIVSFRKSQYKGDIEYWRDLPDLSPAAAAKMEDIM SASSSIFGSGKTKNADKLANRQMSATVMSLASKGAIAIYPGPVDLYNGIDLTTTSAASVA GMLGSNAASARKLKKTSTIAIMPVVCDDIGSLLLSSSERAVLDILLKASSRLHDAQVFDL KQMSKAFKHYSSGYKLLETFDNACSMEFDDLHAVKPMGLLSYLFSGLGIAFAFFLALKYV QDGELAVALVVCVPVVALCAFAAAYGKRYVLTDEGQRYGGQVAGLKRYLTDFSDFTDRGV LDMTLWGRYMVYATAFGISKKAMAQLARAYPEVADPQWLDEHAGTSYMYMPLRSSSLLGA SVGTSLGASTIDPAAFSANFGDLGAQLSSSFADVRSTISAAAPSSSSGGSGSFGGSGGSF SGGGFGGSSGGSGGGSFGGR >gi|148337405|gb|DS264454.1| GENE 396 438509 - 440317 1577 602 aa, chain + ## HITS:1 COG:no KEGG:BAD_0263 NR:ns ## KEGG: BAD_0263 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 120 572 248 700 730 876 98.0 0 MNGKRYGRGLIAAFSALVAVVAIILAVFVISGDEADLSYRSVDFDARLQSNGDIRFTEHL DYQLKRREDGNGDTKPWKQLYLTFKLRNQDLTNITDISVTNASTGEEYTQTDPQLPSGIS DGTLHFTISDLRTNQYVDLVAAFDNTGAAGVERTQSGDYLDELKSTEAAKERQWRDRQRL KAQLTVAGWLICLIIGVLCCVLAIRGVLSANREARYQGGIEYWRDPPQVSPAASAYLIDV VDESVGDRSSRAMTATILALVVKKALAVYPGPSSLYQGIDLSQANASDLARMIASDPNRA KATASTSTLVIMPAALSHRNTLGLSQSEEACLELLIGISMRVGSPVFDFNQMDTACSDWE EGYQSLNRFKSACDLEFGALGAVKSVNGRWLVPSLCLMVIGAIGIFANGASNIAMALCLG VPFICIGVFCMAAGRSEGITERGQQYAGECLGLKRYMEDFSNFSNRGALDLTLWNWYMVY AAAFGISEKVAREFARAYPEVNDPQWLDTYGYDSLGYWTYRSQAWNGPINTNGMMPGGMY GGTQFMGGIGDIGSQLSSGFDSVSSTISAAAPSSSGGSGGSFSGGGFGGGGGGGGGGGGG GR >gi|148337405|gb|DS264454.1| GENE 397 440546 - 441409 1189 287 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 13 283 14 281 284 174 38.0 2e-43 MTLFRNLGPFHTTAIGHGEMPLTIENNRGHDVGIETLHASLDAGCRHIDTAWAYYTPGEE EQTGEKLVREALDTWKGPREEVTVATKVGLRRAWDGDKPIWPRDGKPEHLIEYGKQSAQA LGVDSIDLLYLHRHDPEVPYNESCEGIKALLDQGVAQWAGVSNVSIEQLKIAQEILGDKL VAVQNQYSPIHLETQDTLEYCAKEGLAFVCWSPLGGYRHPYDEHLFDPFREVAAKHGVSY QRVVLAWELAKGDHMFVIPGAHRPETILDSLKADELELTDEELAFLG >gi|148337405|gb|DS264454.1| GENE 398 441511 - 442188 863 225 aa, chain - ## HITS:1 COG:FN1861 KEGG:ns NR:ns ## COG: FN1861 COG1279 # Protein_GI_number: 19705166 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Fusobacterium nucleatum # 1 220 1 198 207 192 50.0 3e-49 MGFFFQGLTLGLAYVAPIGMQNLFVIDSALTKPRRRALLTALIVLFFDVSLSLSCFFGIG RLMQDYAWLKLAILAIGGLVVIRIGAGLLFPGKGGDDGAAQTPQSQTSQSQGLAQRVTSK FGGDSELLHTIVTAGVVTWCNPQAIIDGTLMLGAFSATLTVGQSTPFITGVETASALWFF GITLLVSLFSHKFSPRIVTAMNRVCGAVVVLYGVKLLADFVMAVL >gi|148337405|gb|DS264454.1| GENE 399 442463 - 443974 1814 503 aa, chain + ## HITS:1 COG:BS_ydfD KEGG:ns NR:ns ## COG: BS_ydfD COG1167 # Protein_GI_number: 16077604 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 20 503 13 480 482 414 43.0 1e-115 MARIAPLNIDWKPDRTTGEPVTEQIVGYMCEQVHSGNWPIGSRLPSQRALAEWFGVNRST VIAAINELSDYGIVEGQHGAGTRIVSNTWSLMLPGAPDWADYVDSGFFKANNDTIQAINR YEFTPNMTRIGTGELDPRLFPKAMWRQVLGEAADEIETLGYPPPEGLPELREAIAAHMRA TGVDCTASQVLVTSGALQALQMISVSLLPAGTTVYAESPSYIKSLQVFQSAGMHLEGVPM DDDGLNVQALRGLLAEGELDTGRPAPLNARNRKGNAILYTIPTNHNPTGVTMSDKRRHEL VELSVDSRLPIIEDGAYRDLYFEDDAPLPSLKALDETGMVITLGSASKSLAPGLRIGWLV AAEPIVQRLADVKMQMDYGASVLSQWTFARFLTNGMYDEYVAGLKRELRHRRDRALVTLQ EKMDGLAHWNVPSGGFYIWMTFDRPIRMNRLFQLAAERGVLLNPGDIYDFAADNSLRLSY SYTTPEEFADAVGVLAAVARELA >gi|148337405|gb|DS264454.1| GENE 400 444065 - 445654 1780 529 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 5 277 2 274 406 327 50.0 4e-89 MQRRNKPEVLAPAGNLRGLKTAVDYGADAVYCGGKAFGMRSAPKNLSLEDFEEGARYAHE RGARVYVTFNVLPRNNEVEAMREYLGKLKDTGVDALIVSDIGVMLMAKQVAPNLELHVST QAGVTNYQAANAFYELGARRVVLAREMDLQAVRDIRARIPDDLDIECFVHGAMCMAFSGR CLFSNYLTGRDGNHGECAQPCRWKYSIVEEKRPGRYFPIEQTAEGAYLFNSQDMNMLAHI DDLLDSGATSLKIEGRSKSAYYIAAMTNAYKTAVNEYMVQRGFEDADGNVLKPFRDRVIR PGDPEYGKPDTEDAIMANADGAFAGKPDIDAIPVGGVPSGNVSAGNVSSGNIAIGEPDNL NYHARSTRRKSNTAAEILPEGWHHAGVRPAPHVTLPDWLLDEPDKVAHRDYSTGFYYPEH KVQQSTDRSAYFRAWLVVGEVLSWSPEDGGRVTIMSRNKIEAGQEVEFVLPGAAPFAYTV PAGGFRDADGHWVEAINNPAHVFSMPCPQEVPVNAAIRSRTKKPTLKAE >gi|148337405|gb|DS264454.1| GENE 401 445709 - 446740 1373 343 aa, chain + ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 38 286 11 224 246 134 34.0 3e-31 MSSTQYDDAILDSNAIDPTDKNGNPIPVTIPIMLAPGIKVVYTTRLGGISEGDFAHFNLG GKSGDKPEHVLANRKALADVLGAKISLISQVHSGDAVDVDESFVINQPFGFDVSGTKKPE DETDGENNATGNDGEPTVIEADGQVTSRKNVALGMFAADCLPVLMADPKAGVIGAAHCGR RGLQKGVIGATIEKMVAKGAQPERIVATLGPCICGDCYEVGGDIADEFDAQFPGTFTLSR FGQPGIDIAAAALQELAKAGVPADNIVSSRPRVNAATQYLSEDEELAGICAADGEGDPKL SERFNKIRRSLCTLENPLWFSHRRASLAKKQHEGRMLALIVRE >gi|148337405|gb|DS264454.1| GENE 402 446880 - 447689 304 269 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 7 250 3 234 234 121 33 6e-26 MQEQKMPVVAVVLAAGFGTRFDENNPKQLVSVGGKPIVCWSIEAFENNDRISDIIVVVNE RVEETVNELIDEAGYAKVRAIVPGGAERVDSTLAALDLLKQAGIPSGAKILIHDGVRPFV EERSIDGCIDSLDQFNAATVAYASTDTILLTEDLGDRKVVKSVPERPNTFRAQTPQAFRF GTIVKAYELAAADPDFHPTDDTRVVVDYLPDEPVAIVDGSETNLKITTPSDMPIAEGIAR SLDPEHAKEEAKARMHAVFAEAFSQMHSR >gi|148337405|gb|DS264454.1| GENE 403 447766 - 448452 725 228 aa, chain + ## HITS:1 COG:BS_pcp KEGG:ns NR:ns ## COG: BS_pcp COG2039 # Protein_GI_number: 16077334 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Bacillus subtilis # 6 188 5 172 215 112 36.0 6e-25 MQQINIVISGFTPYEGIDVNPAVLVPAAVAKQWADPAQSQAISEELLQDIAVTVTNVTLP VSFAKAWPTLLEAIEQAKPDIVIATGLKRTSRGILLERCATNLMDAAKPDADNVIPPRRP IDPEGPAAYWTRLPLRSILRDFAKHEIPAALSSDAGTFVCNSLFYHLLNWSAGQERRILS GFVSLPIVNGRPHERGLSIEQQTAAVDDVLRESVRYFLQPSSSDILLG >gi|148337405|gb|DS264454.1| GENE 404 448687 - 450120 2072 477 aa, chain + ## HITS:1 COG:no KEGG:BAD_0271 NR:ns ## KEGG: BAD_0271 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 477 1 477 477 480 99.0 1e-134 MVEQFPIVLRGYDKDRVDEAFASAQETVNRLREQVKADDQTILELQAQLQEEKNKKAAPK SFASLGANAQQMLASAEQTSAELLERAKKDASAARATVQLQAETLLNNAKIDARRIMDDA NAKAAKVLGDAKDESEAMRANAQHEVDQMRSEAQKAVVAQRQTVDLELTNSREEHGKRLA AERATQEREISDMRTEATSKIAEQRKNANEEISRLKSETNDQIESALAEANKKLADVREQ VSKMMTDAQRRAAEITDTAKAKAQEITDEAEVHRTKTISQVNAEVEQIRADISAQQEEAT KKVNELLTDLNERREAANKQASELISSAQKTRDEAEAYASSKRDEADANAASILKQATED ADEQINERREAAKKELDGVQQRIADLQSREAQITQRVSELRAMFSNAFSGFGMNDLSVVN AVDEGEPSDAQSDDDAQHDDETAAPADADTQDAVENDSAAETEPEGDAESADASQNN >gi|148337405|gb|DS264454.1| GENE 405 450143 - 451483 1826 446 aa, chain + ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 7 445 3 442 450 298 36.0 1e-80 MTDITPLSGDELNKLVDDFEASEHNRMAMNAVTAAGIDKVARNYDRARLMQRRFSTVVDN GTVTHQDRSGRCWLFSSLNVARFVAKQNMGLKEFEFSQNYAMYYDKLERVNYFLKDVAAL VEAGEPADSRLMQHLLSDVMGDGGQWTMAMNVYKKYGAVPKDLFPETESSKNTGEMNVQL RRMLHTAVAHMYADPSAIDAIIADAVAAGHRILTIHLGEPPKSFDWEWTDKDGEFHRDGE ITPVEFWKKYVGSADLESYVCLVDDPRQEHVKGKKIGIEHLGNVAGGDPTEYLNVPNQFM KDCVRQILQEQGIPVWFGADCHPMMDRENGAWATDLFEYGRVYGVDFDLDKEQRVRFGDS AMNHAMAFVGVDVDEDGHTTRRWRVENSWGDKIADKGYFTMSDDWFTEYVYEVAVPKALL PAEYLKALEEPATMLPAWDPMGALAK >gi|148337405|gb|DS264454.1| GENE 406 451823 - 452956 1281 377 aa, chain + ## HITS:1 COG:NMA2180 KEGG:ns NR:ns ## COG: NMA2180 COG0722 # Protein_GI_number: 15795051 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis Z2491 # 25 373 7 346 351 369 53.0 1e-102 MAGLRGPDSSKDAQLLDERAVFPETVDVNIRQLDPIPAPRYFLKELPLTNEMSDLVLKSR QEIRDVLHGRDDRLLAIVGPCSIHDPKAAHEYAERLAAVKKELDDRLVIVMRVYFEKPRT TIGWKGLINDPDLDGQFNIRKGMFMARKVLTDVLGLGLPAATEWLDPITPQYICDLISWG AIGARNTESQVHRELASGMSMPIGFKNATDGSIKPAADSCFAAAFEHHFLSINLDGRVIS AETKGNPDCHLVLRGSSHGPNYDAASVAQALADLKASKASGPSEHGLIIDAAHGNCGKNE VREAEVVEEIAARVAAGEQGILGIMMESFLKAGNQKPAPLDQLEYGKSITDACVPWDRTE QLLHTLADAVDARRKLG >gi|148337405|gb|DS264454.1| GENE 407 453014 - 454198 1515 394 aa, chain + ## HITS:1 COG:mll4988 KEGG:ns NR:ns ## COG: mll4988 COG0722 # Protein_GI_number: 13474165 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Mesorhizobium loti # 46 392 9 349 363 356 54.0 3e-98 MQQQLNTPEDLRAIRQAMDEGKNPLVETDVPRWEDQVGISRIVNRRVLEFEVLPTPAQVL GDLPLSEQAQEIVAYSRDEIRACLYGQDDRLLVVVGPCSVHDPKAALDYARRLSALKGEL DGELLIVMRVYFEKPRTTVGWKGLINDPDIDGSCNIRKGLLLARRTLLGVLDEGLAAATE FLEPTSPQYISDAISWGAIGARNTESQVHRQLASGLSMPIGFKNATDGSIKAPADSCFAS AQQHTFFGIDHLGRAAVVKTLGNPDCHVVLRGSSHGPNYDAASVAKAMDTIRAEMPADSA AAHGLIVDCSHGNSGKDEHRQAQVVRDIAGRIAKGEQGITGIMMESFIEGGNQKAAPLDQ LVYGKSITDKCLSWNTTEQLLRELAHAVAARRWK >gi|148337405|gb|DS264454.1| GENE 408 454302 - 455009 1059 235 aa, chain + ## HITS:1 COG:BH1279 KEGG:ns NR:ns ## COG: BH1279 COG0775 # Protein_GI_number: 15613842 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Bacillus halodurans # 1 212 1 211 231 108 35.0 1e-23 MTAIAIIGAMDEEVANIATALSNVTVTEEAGVKVTRGTLETNKGTAVNVAATVGGMGTVN IAATTQHLIDADQPDAVIFSGIAGNLNTNLHINDVVLGGTLRYLDTDMRLVGQFKPGTAD RPIEEYHSDDRLLELADQALNDLNIHHIVGIIATGNYFVDDPQKVEQVIRETGADAVEME GAAVAHVAARNDVPALVIRALSDNADTDYEDFKTFDISEYADTAAKLTVNIAKRM >gi|148337405|gb|DS264454.1| GENE 409 455253 - 456662 1480 469 aa, chain + ## HITS:1 COG:Cgl0398 KEGG:ns NR:ns ## COG: Cgl0398 COG0642 # Protein_GI_number: 19551648 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 78 432 30 349 386 206 37.0 9e-53 MTLEQMLATPSVVAALVVVAVVVFVVAFLLGRRQGFQDVQDGVDPNDPSLFGAAKNTSLF GPRVPVQSTERQLVAVMPEALVVVDSLATVQYASPAARRFGIIHDQAMALAEIRDIVKLV STDSVVRERELTIPLHGRTRTGVVNTNGKGVEAGKPLPEDTLYLHVRVGQIADNLFAIFI SDMSEQRRFEIMRRDFVTNVSHELKTPAGAISLLAETIGDAADDPDAVKYFSGRISKESE RLTELVHRLIDLQKAQSAAAMLNAERLSVLSVAREALAENQVKAESKHISLVLSVNGRQV LVHANAEELAKEAEQNLDVFVVADHETIKTAVKNLVENAINYSPEHTTVAVGIGIESGKV AIRVVDQGIGIPAASLSRIFERFYRVDPARSRETGGTGLGLAITKHCVEDCGGTISVWSR EGEGSTFTITMPQASGAAEPDHPADSANDNTREKKQSGHSTTTENEENH >gi|148337405|gb|DS264454.1| GENE 410 456662 - 457366 996 234 aa, chain + ## HITS:1 COG:Cgl0399 KEGG:ns NR:ns ## COG: Cgl0399 COG0745 # Protein_GI_number: 19551649 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 230 1 231 232 271 62.0 1e-72 MTRILIVEDEESYREPLVYQLTREGYDVSAAATGEEGLELFTKGGIDLVLLDLMLPGLDG TALCRRIREQSRVPIIMLTAKSAEIDKVVGLEIGADDYITKPYSFRELLARIRAVLRRNQ MVAESGEAADDDIPLVCGDISMRIGQHEVTVRGENVFFPLKEFELLEYLMQNKGRVMTRH QLIDRIWGSDYVGDTKTLDVHVKRVRAKIEEDPGHPKYLTTVRGLGYKIDTPSE >gi|148337405|gb|DS264454.1| GENE 411 457602 - 458729 1802 375 aa, chain + ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 46 373 55 375 375 186 37.0 9e-47 MRNSILVRSIAAVSGIVMLASVAACGDNTTASTDSSAKSDTKTETVSGNFSGAGASSQQA AVEAWIAGFQGTNPDAKVAYNPSGSGAGVSTFLTGATAWAGSDAALADNEVEQSKSVCAS GTAFDIPVYISPIAVVFNLQGVSGKGKTLNMDAETIAKIFDGKITKWNDDAIKKQNPKVD LPDLDITVVHRSDKSGTTKNFLSYVKDAAGDAWSYDLGENWPNEVGQGAKGTSGVISTVQ QADGTIGYADASQAGDLGTVAVKVGDDYVPFSAEAAAKVVDASPLDDSAKGDNRVVVKLD HNTTEKGAYPIVLVSYDVACPAYKDANTAKFVKSWLTYVTSDEGQQTAASAAGSAPMSNT LRQKVVKSIDAIKTK >gi|148337405|gb|DS264454.1| GENE 412 458891 - 459844 1381 317 aa, chain + ## HITS:1 COG:Cgl2520 KEGG:ns NR:ns ## COG: Cgl2520 COG0573 # Protein_GI_number: 19553770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 2 315 29 354 355 197 40.0 2e-50 MSSQSKTAQQPVSGKNADKVFKGVAYACGILILVVLAAVALFLLFRAWPLIGGDQKANSA TISNFTGGKASSFWGYVGPLLFGTVLISALALLISFFVSVGIALFISHYAPKKLATALSY VVDLLAAIPSVIYGLWGGLVLVPAIYPFWNWVAKYLGWIPIFAGPAANPSRTVATVSVVL AVMILPIITSMSRDIFLQTPRLQEEAALALGATKWEMVKLAVLPFGKSGVVSASMLGLGR ALGETMAVLMILSPGLNYSVKLLQASQNQTIAANIAAQYPEANDLGVSVLIGTGLVLFLI TFVVNFIARKLTEKASV >gi|148337405|gb|DS264454.1| GENE 413 459844 - 460839 1412 331 aa, chain + ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 5 328 3 306 307 196 40.0 5e-50 MTAANNDASPMDGAPVIDFDKFKPTRSFTAARKRKDFAMKALISCAFIVALIPLFSVLLT TIINGVKRLNLNFLSYNMTGVVGGNPTPSGGYGGILHAIIGTLEITFGAMLISIPIGLMC AVYLVEYSNRGKLARVITLLVDVMSGIPSIVAGLFAFSMFTILIGPGTINGFEGSVALSL LMLPTVVKSSEEMLKIVPHDLREASYALGVTKQRTITKIVLRTALPGIVSGAILAVARVI GETAPLLMTAGYIASTNVNLFSGQMTTLPVYVYQEYSKLNANCPANASAACVTTIPMERA WAAALVLILIVLILNLIGRLVAKVFAVKSER >gi|148337405|gb|DS264454.1| GENE 414 460885 - 461664 190 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 1 207 223 77 29 1e-12 MGQRIDVNHLNIFYGDFLAVEDVNINIEANKVTAFIGPSGCGKSTVLRTLDRMHEIIPGA HCEGEVLLEGKNLYDKDVDPVAVRRDVGMVFQRPNPFPTMSIRENVLAGVKLNNRKISKS DADDLVEWALRGANLWNEVKDRLDNPGIGLSGGQQQRLCIARAVAVHPQVLLMDEPCSAL DPISTLAVEDLINELKNEYTIVIVTHNMQQAARIADYTAFFNLKAVGQPGHLEYFTDTTT MFNNPQNEEAERYVSGRFG >gi|148337405|gb|DS264454.1| GENE 415 461944 - 462837 1067 297 aa, chain + ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 47 280 111 348 511 119 31.0 1e-26 MNRYARIAIAVLASVGLLTSASACGTSQNGAGSAHGAISVVSSINQWGTLAEQLGGSGVR VTSIINSTNVDAHDYEPTTSDIAKLQKARIVIVNGAGYDSWAVKAAQSAKSQVINAAEIG GVKDGGNPHVWFSAAVRKAVAQAITRAYEGTRPDGKADFDKLNQQWRSKEDEVARKITET KRKADGEAYAATESVAEYLAGDLGLKDATPTGYMRATANESEPTPTDIKQFTDMLEAGKV GLLVVNIQEETELTGKIVTAAKSSNIPIVELTEQMPEQYDSLTDWMAALVDAFSQAI >gi|148337405|gb|DS264454.1| GENE 416 462929 - 464317 2290 462 aa, chain - ## HITS:1 COG:SP0287 KEGG:ns NR:ns ## COG: SP0287 COG2252 # Protein_GI_number: 15900221 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pneumoniae TIGR4 # 1 461 19 490 490 431 52.0 1e-120 MEKFFHLKENGTTVSTEIMAGLTTFFAMSYIIIVNPQILSSTGMPWGGVFLATIIAAIIG TLVMGLFANVPYAQAAGMGLNAFFTYTVCFGLGFKWQETLCMVFLCGLINIIITVTKIRK MIIQAIPEVLQNAIGGGIGLFVAYVGFLNVGFFTFTTKSAAKSGDTVQATPGLAVMNNPT IWLFIIGLVLAIVLTVLKVRGGMLIAIAVTAVVGIPMGQTTMANSVSIADTFAQLPQTFG VIFTKDGFPALFSDVSKLPIILLTIFAFSMSDTFDTIGTFIGTGRRTGIFSAEDEKALEN GSGFSSKMDKALFADSIATSIGAICGTSNTTTYVESSAGIAAGGRTGLTSVVVAICFALS AFLSPVISAVPSAATAGVLVVVGCMMASSLKEIEWGDISEAIPAFFASVFMAFSYSISYG IAGGFITYCIVKTCKKQAKDVHPVIWVVAVLFILDFIITAVL >gi|148337405|gb|DS264454.1| GENE 417 464740 - 465261 850 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025302|ref|YP_909147.1| 50S ribosomal protein L10 [Bifidobacterium adolescentis ATCC 15703] # 1 173 1 173 173 332 100 3e-89 MKRPEKEAVVAQLTDKFRNADAIYLTEYRGLTVPQISELREKLGRDTSYTVAKNTLVRIA AKEAGIEGLDELLAGPTAVTFVKGDFIEAAKTLRDFAKTNKALIIKGGFADGTVYDAEGA KKLADLKSRPQLLAEFAGDIKATMSKAAYLFNALPTKAVRTIDALREKQEKAA >gi|148337405|gb|DS264454.1| GENE 418 465376 - 465756 599 126 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025303|ref|YP_909148.1| 50S ribosomal protein L7/L12 [Bifidobacterium adolescentis ATCC 15703] # 1 126 1 126 126 235 100 4e-60 MAKYTNDELLEAFGEMTLVELSEFVKAFEEKFDVEAAAPVAAVAAAPAAGAAAEEEKDEF DVILSAVGDKKIQVIKAVRAITNLGLAEAKALVDGAPKAVLEKAKKEDAEKAKSQLEEAG ATVELK >gi|148337405|gb|DS264454.1| GENE 419 465989 - 467476 1486 495 aa, chain + ## HITS:1 COG:no KEGG:BAD_0286 NR:ns ## KEGG: BAD_0286 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 495 7 501 501 774 99.0 0 MTRQWTVKVDGNNVKTLHDGESVEVGRKPLRPLSDDGFARLDIMDPGKSMSKRHAVLSVD KQGNCSVRDLHSTNGSFVVTNNGQLMRLPAGEDIKLPIDSMTLQFGDVRLTLESAFEHDD EDDDATSGVSDDTSQPVSNLFEYAVSDEAPQEPDAADMSVDDILNLRAGEPTTFFHARNV TDRADALHQAERQTFTPEHADKPELEDAFPSVSLVQETVVAADKPRDLFADAAAQAEAEA EIEADAADSADAAATDAEVAAVSTETAARPLEASHDGNKNNLIPVDKLFSARPNTPIAVA LPDRNDTGDNTGNVDKADNAADASAQEQTQSAEQSQMAEQPTSETAEQQPAEQQSKPMHA TQPQTEQPGTVAAEDDDERFRPQNSQSQPAPDETAAFKPIFEPGSVFDRVSKGGLAKQEQ TIEVDGLTSDDAKRTDDFTVQFQMARHPELLPFLAMNPSLYDDLYAWLGALGNQDIDAAL AHNPGYEEYRKAVGK >gi|148337405|gb|DS264454.1| GENE 420 467485 - 471105 4077 1206 aa, chain + ## HITS:1 COG:no KEGG:BAD_0287 NR:ns ## KEGG: BAD_0287 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1206 5 1210 1210 2356 99.0 0 MSENEETATALDRIRGWREEYRLGLAPSPLEDVTQLSAQLDLTHAHPSGIAQLFAKGHVT LDSLFRDNGMLRAAGRRVERVLDDRDAKSRVSGVGELSLVVGVAIWKGNQMPVLMYPVEV RKEGRNIENGTVIAFTGRVRLNAAFAAVMRENNVTLDETKLFDGSNYESGTPETSAVFAA ITARASSVFPDFEIERHIILGCFMDPSSQMLVESRQIINQLSQGPTGNTVLDALAGNKEA ADALKDAQIPEYSPFDADPHGEYEIGDVDNTVRYAAQLAASGHSIFVDSAISGNTAEQAA AIASRCVMGGHSVLYVPCVTDQKRRFMQTIAANEMSGQLLDIADDGANAAIDRQLIAAVG FQSGVATSRFDQISDELVGVRSRLARYLGDLHGVSQEWGVSAYQTIQNLAQIAVLPTHPT THVRLAKQSAHSIADKMEEWAQKLYRAGELGEYTIGAQDTAWYKASLYSEEEAVSAYQRV VELLRKVLPATRKQVSSTVQTCGFPIPTTAQEWGRQVMVLKNLRRVLDVFQPEIFERDID SMIEATKPKAQRKAEGSSMGFWERRRHIKEAKSMLRVGAQVENLHEALLVVAKQAEQWHM FVPHGGWPVLPAKLDDIINTQDQLTNDMTALNVALATTPQGGNLDTVDLNQVEERLKALY DDKQALDTLPERARLEREFHSAGLDELVADLSNRGVPNDAVAGELQLAWWTTAFEDIVKS SAIISNQDGSAMQSAADRFTQVDVEHVRSIGPMVAQESVRRLCDMLFSRTQEANLLHTTL AGSRNVPLNRLRREHPQILAAAKPILVATPATLAAITDPAPLADTVIIDTAAHIPSIELL SIIARAKQVVVIAHRKTVTSDGLQRLIALLPSVKITDRPVRRAPKLNAFLESEGYGSVPC DVAREGYQGEVAYHFVPDANGVPVINSGLVESSQQEIDEVVSIIRKRAAGFTIVPASYVL TVVALTHTFRIRLGAELKSLANKDKAMGMFLRHVRIVDIVDVAGAHATDAILAMCYAKTS HGRLLQQFGALESDGGRGMLLDALAVPDRHLDIVSSFASDDMDDERLHQDGPKALKTVLR WAEQLDDSMVRPAIKESGENVLFNDLAERIRERGLDVAVDYGFDDGLKLPLVVGLKGEPF ALAVLTDDAQFMGLQSTRERHRVLLQDIESLGWSVMTVWSVGAFVNPDKEVDRIVARLGS LYREER >gi|148337405|gb|DS264454.1| GENE 421 471129 - 471374 148 81 aa, chain + ## HITS:1 COG:no KEGG:BDP_0399 NR:ns ## KEGG: BDP_0399 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 18 80 27 89 90 98 88.0 1e-19 MEHDDSQTQSETHSTPSYSATRRTARKHKRVVRQGTELFDADGVKLEPSDVLTKRQREAD DDKRILNELPPHWAVFSERGR >gi|148337405|gb|DS264454.1| GENE 422 471418 - 471960 516 180 aa, chain - ## HITS:1 COG:no KEGG:BAD_0288 NR:ns ## KEGG: BAD_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 180 87 266 266 303 97.0 2e-81 MRNVAKGTAITREAVELREAPSDGSLSNAFHTLDDAVGLIAQVGIGAHDVLMSGMARASP VVPQGHTSIEVRLASVADGLIPGDKVTLSSATMTDAEMQSGTPNVADMPNGTETPSGMAN DMPDGGVDAQLRTICAEALLTGKPAKDAQGNTIAVFAMPPNEAAVVLRVQEYSAVIATIN >gi|148337405|gb|DS264454.1| GENE 423 472334 - 472516 283 60 aa, chain - ## HITS:1 COG:ML0180 KEGG:ns NR:ns ## COG: ML0180 COG2331 # Protein_GI_number: 15826992 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 1 57 1 56 99 58 50.0 3e-09 MPTYHYRCKNCNYDFTEQQSFTDDPITVCPECGEEQVRKVYSAVPIEFKGSGFYRTDKSK >gi|148337405|gb|DS264454.1| GENE 424 472599 - 473219 264 206 aa, chain - ## HITS:1 COG:MT1021 KEGG:ns NR:ns ## COG: MT1021 COG0212 # Protein_GI_number: 15840417 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Mycobacterium tuberculosis CDC1551 # 11 199 4 185 195 80 34.0 2e-15 MDMYEQQRELKRQWRAAAIERRKRTSADQRREAGRLLAEHALEASLIRPRSTVAAFASMG SEISMMPLLEAMFDADCRVLVPRLGAGMEVGWSELNGLDDLRDQRNADGSINTHRPQEPE NAAEGPEVLTSAELIIVPAFAVDEHGFRLGRGGGWYDRALEHRSSTARVVAVCWPWEPTD ETVPHEPHDIPVDGVLTPDGYADVRG >gi|148337405|gb|DS264454.1| GENE 425 473321 - 473956 376 211 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227385132|ref|ZP_03868523.1| acetyltransferase, ribosomal protein N-acetylase [Jonesia denitrificans DSM 20603] # 24 210 16 203 204 149 39 3e-34 MRRPGNNSFEMPEFIQSHSMRVPVSLRPLTGADYDEWNEVRWRNDAWLKPWESGDPLHGA PITYKEWMKQLRRNERAGTGAVFAIEQHGRIVGQISLGAICYGAMRSGVVGYWVDERCAG RGYAPMAVALLADWAMFDPTGPRLHRMEIDILPENKRSRAVARKVGATLEGVRRAYMYVN DQWRDHESYVLMAEDAPNGFTARLMTGNSPS >gi|148337405|gb|DS264454.1| GENE 426 474016 - 475212 952 398 aa, chain + ## HITS:1 COG:no KEGG:BAD_0291 NR:ns ## KEGG: BAD_0291 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 398 1 398 398 535 99.0 1e-150 MGYESLSTVVVLAIVVILMLIWLPRRTIKGMKRVIEHREDRFSPSLHLVDADSGTRFSDE TVAAAKGVLMQSTEAHKGATSEERIAEIRALRHAAVRRRRAIAVSLLTITVVVLVCAFAL HFSPLFALIPAALLAAVLALGVRASKQAVAWERKVARYHAKVKKRAAAERKRAQAEQAER ARLRAQELAEARKVADEQLKTDVVPEGEIRQAIARGKADRDAAVKRRKEEMSSKEETQTA EKAVDQTTERADAAPADVKEVGLSIHDERDNMAEEAKTVAVKSTQDLISFSLGAPRDGAD VEVDAPESMEIKSTKQVAKAVPVETPSDEAEPLIPPSDAMGSMDADEAAARVDEGVHLRE VDVPGFHDAEVRADVEAPDVTSDSLGTGLEAILARRSA >gi|148337405|gb|DS264454.1| GENE 427 475435 - 475728 539 97 aa, chain + ## HITS:1 COG:MT3527 KEGG:ns NR:ns ## COG: MT3527 COG0234 # Protein_GI_number: 15843014 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Mycobacterium tuberculosis CDC1551 # 3 96 4 98 100 120 66.0 8e-28 MSISLTPLEDKIIVKQAEAETQTASGLFIPDNAKEKPQQGEVLAVGPGRRNDAGERIPVD VKVGDKVLYSKYGGTEVHYQGEDYLIVSARDILAILG >gi|148337405|gb|DS264454.1| GENE 428 476236 - 476406 300 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025311|ref|YP_909156.1| 50S ribosomal protein L33 [Bifidobacterium adolescentis ATCC 15703] # 1 56 1 56 56 120 100 2e-25 MASKSADIRPGITLACTECKERNYITTKNRRNTPDRLELKKFCSRCGKQTVHRETR >gi|148337405|gb|DS264454.1| GENE 429 476468 - 477667 1293 399 aa, chain + ## HITS:1 COG:ML2447 KEGG:ns NR:ns ## COG: ML2447 COG0812 # Protein_GI_number: 15828323 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Mycobacterium leprae # 3 395 20 364 367 194 36.0 2e-49 MTSFADLTTIGVGGPIATFLEPTTRVGVIEAVEEADSQGLPLCVIGGGSNMLVSDTPFEG VVVRDARRSISVLDEAAPVEDDGRVVHVNAEAGCNWDDFVDYCVRLGLEGVEGLSGIPGT VGASVVQNIGAYGQEVATSVDSVEVWDRKERAVKALRNDQLAFGYRMSALKASMYSAPAT PAAEFFPTPRYVVLSVTFALRHSDTGVVGYGQLAKALDVAVGDRMNTADIRNAVLKVRAA KGMLEDAHRYASPAMQGTKKTNLVDVALESQSKQNGDDGPDFNRHSCGSFFMNPILTPQQ AETLPEDAPRFDAALPGGGQGVKTSAAWLIDHAGFHKGFKINENAPAGLSTLHTLALTNR GGASAEDIARLAKTVQDGVEAAFGIRLVPEPVVIGMNLK >gi|148337405|gb|DS264454.1| GENE 430 477773 - 479272 2167 499 aa, chain + ## HITS:1 COG:MT3351 KEGG:ns NR:ns ## COG: MT3351 COG0531 # Protein_GI_number: 15842842 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Mycobacterium tuberculosis CDC1551 # 5 489 6 483 495 388 48.0 1e-107 MNVFRKKSVEQTLAETGESGHALKRDLTWWDLAIMGVAVAVGAGIFSIGAQAAAFHAGPA VVLSFLIAGVVCGAAVMCYAEFASMIPVAGSAYTFTYTTVGEIVAWVIGWDLILEMLMAG SVVSKYWGVYLNQFFELIGWNINTNIAIGSFNFDLAPVIIVAFFTALLVMGTKIGARVDG ALTILKIAIVVFIVVVGFFYIKAENFTPFIPPSEPAASTDGSGVSAVMEQPLWQWATGMA PSIYGVTGIISGAALVFFAFLGFDVVATASEETINPKKNVPLGIGVGLGLIIVLYTLVAI VTTGMVSYKDLAKQSDPSLAVAFKMVGADWAAKIISLGIVIGMATVVMVLLLGLTRVVFA MSRDGLLPRGLSHTGKHGTPVRLQIIVGVVMALIAACCNVGILSDMVNIGTLSAFTLVAI SIPIMRKKRPDLERSFKIPGNPWVPILIAIANLWLMVNLSVLTWIRFVVWLIVGFAIYFG YGYRHARLGAGELEVAAQE >gi|148337405|gb|DS264454.1| GENE 431 479309 - 479629 530 106 aa, chain + ## HITS:1 COG:Cgl2895 KEGG:ns NR:ns ## COG: Cgl2895 COG1146 # Protein_GI_number: 19554145 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 106 1 106 107 134 66.0 5e-32 MPYVVAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD LPDEWAWYKDAAVSFFAEVGDLGGASAAGPIGKDPEQVAALPPQNQ >gi|148337405|gb|DS264454.1| GENE 432 479828 - 480976 1175 382 aa, chain + ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 10 381 14 367 367 220 38.0 5e-57 MGFHEFSSPYDWSRIASYKRTAKAAFGGMVDLSVGSPVDPVPDSVRKALAVSSNDPNAYG YPVTAGTADLRDAIHEWFAAARNVDLRAIGADVVPTVGSKEGVALMASLLHFSEGDVVVQ PKVSYPTYEIGTQLAGAQTLKVDDVADADSWKDVPGVKAVWVNSPCNPTGEVLSAERMAG IVRAARAIGAVVLSDECYALMQWEDDVAEADADTLASTPCALRADVCGGSAEGVLVLYSL SKQSNMAGYRTALIAGDRSLIGPMAAYRKQIGQIIPGPVQAAMAAGLRDFDAVKTQHARY QERLGMLVSALRAYGYCTDMPQGALYVWVKAKSGDCWEDLRQLAEIGIVASPGEFYGAPE YLRFSATASDAAIASAAERLAR >gi|148337405|gb|DS264454.1| GENE 433 480892 - 481317 187 141 aa, chain - ## HITS:1 COG:no KEGG:BAD_0298 NR:ns ## KEGG: BAD_0298 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 70 1 72 199 119 88.0 5e-26 MQIFTKLSNKFKYSKSRKLQASAQTRLTAKTIYAVPGNSVIIDASLADKLTLYWGELSHC ATPGSATSTAAHSHKTHGRWTPSDSAIMKDLRVNRRSFLFSTLSFVKRPSSANRQRANRS AAEAIAASLAVAENRKYSGAP >gi|148337405|gb|DS264454.1| GENE 434 481515 - 483557 1767 680 aa, chain + ## HITS:1 COG:no KEGG:BAD_0299 NR:ns ## KEGG: BAD_0299 # Name: not_defined # Def: putative outer membrane protein # Organism: B.adolescentis # Pathway: not_defined # 1 680 1 680 680 1419 98.0 0 MKFEYHVKPTGSDAACGDAEHPFATISKAAQMASPGDTVIVHEGAYREQVDPKRGGLSEH ERITYCGAEGEARPVIKGSECVQGWTELADHPHVWTVMLDNTMFGDFNPFATPIFGDWLE MPKFGKDPDKHLGDVYLNGVSFFESTTLEGVYDPQPRDTDEDFALKIPCPVPDVDRTRYV WHAEVDENAGTTTIWANFQGADPNEELVEVSVRRTCFFPSRNHVNYITVRGFEMAQATGD WAPPTSQQWGMIGPNWSYGWIIEDNVLHDAKFSAVSLGKEISSGDNEWAKTERKTGYQYQ LEAVFKARRIGWEKGLIGGHIVRNNDIYECGQNAIVGHMGSAFCRIEHNHVHHIALKREF FGWEVAGIKFHAALDTVIANNNIHDCSLGMWMDWQTQGTRITRNVFHDNVRDLMIEVSHG PYLVDNNVFASPVMFQNWSQGGAFVNNLICGGIEPHTVPDRSTPYHYPHTTEVAGCAVVS GGDERWLNNMFAPQPVKPTVGEYGLSAYSDCPMSMHEYLERQRAMWTDPSQGGGERNPLQ SLYAGGNIYLSGAQGLNKQEGAGDDSERMQEDAPFFGGTASTSVACDEPMPVTLVEEPDG LYLQCTVPQAVADTRMQVVTSDMLGVPRIVEERYEQPDGSDYVLDTDLLGQALTATERKA GALNGLVSGENHIRIWEWNN >gi|148337405|gb|DS264454.1| GENE 435 483559 - 484698 961 379 aa, chain + ## HITS:1 COG:BH2105 KEGG:ns NR:ns ## COG: BH2105 COG3405 # Protein_GI_number: 15614668 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase Y # Organism: Bacillus halodurans # 14 377 16 377 388 384 56.0 1e-106 MTNATDTNKTLGESMFAQCGYAQDAIDKRVSQVWYEIFEGPNKFYWENDEGLAYVMDTGN NDVRTEGMSYAMMIALQYDRKDVFDKLWGWVMRHMYMKDGHHAHYFAWSVAPDGTPNSNG PAPDGEEYFAMDLFLASRRWGDGEDIYEYSAWGREILRYCVHKGERYDGEPMWNPDNKLI KFIPETEWSDPSYHLPHFYEVFAEEADEEDRPFWHEAAAASRRYLQAACDERTGMNAEYA DYDGKPHVDESNHWHFYSDAYRTAANIGLDAAWNGPQEVLCDRVAALQRFFLTHDRTSVY AIDGTAVDEVVLHPVGFLAATAQGSLAAVHSAQPDAEHNAREWVRMLWNTPMRTGTRRYY DNFLYAFAMLALSGKYRYE >gi|148337405|gb|DS264454.1| GENE 436 484698 - 486284 875 528 aa, chain + ## HITS:1 COG:CAP0114 KEGG:ns NR:ns ## COG: CAP0114 COG3507 # Protein_GI_number: 15004817 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Clostridium acetobutylicum # 3 520 41 530 531 238 32.0 3e-62 MITSTNPTVYTDFPDPDIIRVGDVYYMATTTMHFTPGCDILRSYDLVHWEFIAHALNIVA DTPEERLECEGANAYGRGMWAPSLRYHRGTWYVLFAANDTHASYLLTADDPCGPWRKREL DGFYHDSGLFFDDDDRAYVVYGQSTLRITELNPELSGPMPGGLDRVIVQDDPQADLGYEG SHLYKHDGRYYVFTCHFPQGKGKTEACLMAESLDGAFEAREIIDDDLSFHGYGVAQGGMV DTPDGDWYAFMMQDRGGVGRVPILMPMRFGEDGFPVVGENGKVPQSVSVPAASCAEPVTP INGSEFIARHNAEGGVDANCLQPYWQFNHIPHNEYWSLTERPGAFRLHSGRISSNLNHAW NTLTQRTMGPVTVAEVTVDASTLHDGDFAGLAAFQGCYSYIALTRRNGRTMLTVQYKPVN DDSIFSDDDWDSPAVTDAEIMADADCMRLRAVYDFTDCKDEVTFFYRDADTPESEWCPLG TAHRMVFKMDHFTGCRIGLFLYSTKETGGIADFYDFAYSTPDTKEREQ >gi|148337405|gb|DS264454.1| GENE 437 486281 - 487732 853 483 aa, chain + ## HITS:1 COG:STM1623 KEGG:ns NR:ns ## COG: STM1623 COG2272 # Protein_GI_number: 16764967 # Func_class: I Lipid transport and metabolism # Function: Carboxylesterase type B # Organism: Salmonella typhimurium LT2 # 9 297 13 278 502 212 44.0 2e-54 MKRQAIVAQGTVEGLAAEDQGITVFRGVPFAQPPVGGLRWRAPQPALPWDGVLQAFDFGP TAMQPTPGASDDFYDREWGTDPAVPMSEDCLYLNIWTPALRGYGADSMVTSEKLPVMVWI YGGAYQCGGTFEKEFDGTHLAANGVVVVSVAYRLNAFGFMTHPLLHEEAVERGDGEPYAN FGFLDQRAGIQWVKENIAKFGGDPENITVFGQSAGAASVLAQICSPMNHGLFQKAIMQSG AGLGYFNARQDTLEHAQANGIRLFEALGVSTLEQARAIPARTVLEAAESLPVPPDSGRED DWSMIVNWVPCVDGLFLPDQEERIVEGCKANNVDMLVGNTTNEFIASTEDGKPVHVGQLG NLTLIRKWTASGGTAPYYYHFDVAMPGDDAGAFHSSDLWFSFGSLAKCWRPFVGWHYDLA RRMGLYWTNFAANGDPNGTDRDGTPLPVWDPCIGEEYPAMHLCQEPGMRTDWLTETDRKA FGL >gi|148337405|gb|DS264454.1| GENE 438 488612 - 489943 806 443 aa, chain + ## HITS:1 COG:SMa2355 KEGG:ns NR:ns ## COG: SMa2355 COG0389 # Protein_GI_number: 16263727 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Sinorhizobium meliloti # 23 354 29 367 379 200 34.0 4e-51 MSTAPRIAAAKRDWGHDEVGCTVLHIDMDAFFASLEVARHPEYADKPVIIGIGNRSVVSA ANYEARKYGINSAMASSRARKLCPNGVFLPVDIHYYREMSRRIFTEVFSRVTDRIEQVSV DECYMDVSGALLRWKSPRAIGAWIRDQVARRYHITCSVGIAANKLVAKMASTNAKPDGML MIPVARHAEFVQMMPLRGIPGIGPSLEKRLNAWGVDSVADLAKMSMESLEQATGSAISAR GLYMAARGLDDRPVAPRAQEKSVGAERTFDKDTQDMRQVTSMLRWCCDDVAGTLRRRGLM ARKVMVKLRFPDLSYATKGHTLDCPTDAASMLYPQCVALLLAMMGMPESSIDAISLTRPV RLAGMSAGGLVEAADAAVQLSLDDMLEERNEVQRGRGTDAEPSTQSERLRGAEAALDAVR LKYGKGSVRLGIWRAGPSGNLEH >gi|148337405|gb|DS264454.1| GENE 439 489982 - 491349 1058 455 aa, chain + ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 87 350 79 330 430 101 27.0 3e-21 MRYRDKAVHARNPEVLVAGRRRLAIVAAVVLVVLLAVGGWFLARCLRSSQSQAGQGAATQ MDVAKQKKHVVKKAEPKEHHGNSPDCPDTDCIAMMVNGDLLFHPGLWDNFAGPNTAATDG TAYDFTSLFEPMRKYIDASDIAVCEFETPIAPRGGPYTGYPVFNIPSEVADAAAKVGYRA CTHASNHSWDQGADGITRLWDTLDQDGIAQTGSYKTEEDSTKPLVIDSPTGGGKLGLIAG TVSLNAQTPDYDWRVDRLRESGDPNHQADIDKAVAKAKEARKQGADVVAIAMHSVQEYLD YADSWQQSEAHELADTGAFDVIYGAGCHCAQPVENYNGTWIIYGLGNAVTVTSYIPGNEV NNQGVTARVQFAGKKGVAGSWRVNRIDWVPTANVRQGQYQWCPISDDHPDGACWNETEDA NQRQRIWNVIYSMGADQNVVREWNITAEQAGSSGK >gi|148337405|gb|DS264454.1| GENE 440 491429 - 492418 1129 329 aa, chain + ## HITS:1 COG:MA1334 KEGG:ns NR:ns ## COG: MA1334 COG0111 # Protein_GI_number: 20090195 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 37 328 19 312 319 162 34.0 8e-40 MDGVFETQPDRTDLPLVVMPVVIESMIGPFKRNFTMLENVARVRMYEDFTLDEDTIVERC KDADAVMVIGFHCADAILDRLDAKCYAFGGTGVASYINLEKTKERGIRVCNVLHYGDHAV AEHAMALLMELTRHAGALDMQVKQGDWDGADGFELFGKKLGIIGLGGIGQTVAGIANAFG MKVSAWNSHVPAQVFENLNVTPVEDMNELISNSDVVSVHMPLLDSTRGIITAKNLDALRP GTLFVNTARAEVIEPGALLARLQRGDIPAALDVFDHEPLAADDPLCKIPGIVLTPHIAWR TDGAYIGMTKQVVQSIAAFFKGEEFNVVV >gi|148337405|gb|DS264454.1| GENE 441 492478 - 493116 558 212 aa, chain + ## HITS:1 COG:SPy1617 KEGG:ns NR:ns ## COG: SPy1617 COG1739 # Protein_GI_number: 15675495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 19 205 18 202 210 127 37.0 2e-29 MQTILDSADRPAHDAFVEKKSEFIGDACHISSLDEALAFVQTIRDQHPKARHVAYAAVCG GSDGRLAERMSDDGEPSGTAGKPILDVLRANEMTDCVVAVTRYFGGILLGSGGLIRAYST GASIAVKAASKAKIVPCGEYQVTLDYPQLGSFQNLLSTVEGEQTDAQYTDRIALTVVVPQ EQANVFESRVVETFNATVVPQLVGTSNRPVKV >gi|148337405|gb|DS264454.1| GENE 442 493162 - 493824 812 220 aa, chain + ## HITS:1 COG:no KEGG:BAD_0307 NR:ns ## KEGG: BAD_0307 # Name: not_defined # Def: AbrB family trancriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 220 1 220 220 351 99.0 1e-95 MSDENEQHENDSQADASNADETVDFEPLTATYERLRHSTDSTALSEFARRPLPDRSDQAA FSRATALLEAVAGNAHTPVEDRVFLAETMPFPNILVKLSTDESPEVRKAVAGNADDKNWL VGRLTKDESPEVRATALRNKRTSWKMRLEGAEDSTMDSDTLDFLGSLGTQVEPDAPVVLA TMVRRAVALNPNVSDRMLQQLAQDASSDVQKAAQRQLAEK >gi|148337405|gb|DS264454.1| GENE 443 493894 - 496056 2386 720 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 9 720 2 715 724 510 40.0 1e-144 MTEQTENATRLARPLIRLAKLVGVATSYVGMSHDYHEIEDDVLVAVLGALGIDASNDEAI NQSITSIKSERETRVVAPTVLHVVGKESKVEVHGGMFDVPEASITLENGKQFTGKISHEG GEKIAHEINGSFFFMSYLVLPADLPEGYHTLKVTVGSETETATVISAPEKIELLDDMKNG SLWGWMSQLYSIRSKGSWGVGDFEDLKTMLVEAKKKTGSDFMLINPMHAAEPVPPLTPSP YLPISRRFINFSYIRPESMPEYLTLSHEDRAEVDALHEQVESLNDDARLIDRDAMWRVKK HALWVIYKAGRTKARQAEFDRYLAECGDEIESYATWCLCYDKWGAPSDDTDNWVRKYNRD SEEVAQLREKFPDTLEFYRWLEWVATDQLHAAQQAARKAGMKIGIVADMAVGVHPAGSDV WWNPERFAKGATVGAPPDMFNQQGQDWSQPPLNPIALEQTGFRVYRDMVHDMFANAGAVR IDHILGLFRLWWIPEGKPATDGTYVHYDSDVMLGILALEASRAGGVVVGEDLGVVPAYVS KSLSEHGILGCAVEWFEQMDGVFRTPKDWRPYALASVNTHDMPPAAGYLEYGHVKLREQL GLLSGPVEEFQKSATAEHNAMLNMLVEEGYLDKAALDDEAANENEIVDALYRGLKGSPCK LMAASIVDAVGEKRTQNQPGTNNEYPNWRIPLADGEGNVVPLEKLFDEPRLQEITAIMRG >gi|148337405|gb|DS264454.1| GENE 444 496328 - 496777 766 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025327|ref|YP_909172.1| 50S ribosomal protein L13 [Bifidobacterium adolescentis ATCC 15703] # 1 149 1 149 149 299 99 2e-79 MKTFTPKPADLTHDWYVIDATDVVLGRLATQAATLLRGKNKPTYAPHADSGNHVIILNAD KIALTGNKLGKELYMHSGRPGGLRRDSYAQLLKTNPERIIKSAIKGMLPKNRLAKVQLDR LHIVRGAEHPYAGMKPQVFEIAQVSQQAK >gi|148337405|gb|DS264454.1| GENE 445 496798 - 497289 816 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025328|ref|YP_909173.1| 30S ribosomal protein S9 [Bifidobacterium adolescentis ATCC 15703] # 1 163 1 163 163 318 100 3e-85 MAENTNDSAVLETEEELTSYTTETNAGAGTGTSTIAPGYGTGRRKEAVARVRLVPGTGKW TINGRTLEEYFPAKLLQREVNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALN AIDRDANRAALKKAGFLTRDARVVERKKAGLHKARRAPQFSKR >gi|148337405|gb|DS264454.1| GENE 446 497386 - 497571 63 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSLDVLDVFWQTLQMKHPHLPHSRPTRYRTFRMGRLRIDVCADSLRRPLRVNPSKSASS R >gi|148337405|gb|DS264454.1| GENE 447 497540 - 499987 2646 815 aa, chain - ## HITS:1 COG:PA2160 KEGG:ns NR:ns ## COG: PA2160 COG1523 # Protein_GI_number: 15597356 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Pseudomonas aeruginosa # 89 724 56 668 716 466 41.0 1e-130 MKNPPLHRYATRPGLYFTDDGGADAVVRSETADQVWFCVLEPLDQPSAFYADAARLFNEP GLTFIDQAKKQRICTRRIPSLNLRETLFRMDGPNYGLWYVHVPQAWDGMQYGYRVNGPWD PNHGVSFNPYKLLLDPYAKGIEGKMELDPGAFAYECEIKNGKVAGSPFGPMSTVDSLGHM PVSVAIDDRDINKHMGEPSHPHVPWSKTVIYELHVKGFTANAPWLPPELRGTYAGLAHPA TLSYLQDLGVTSIELLPIQAKQSELFLQERNRTNYWGYSTLGYFAPEASYATKQAQEAGA GAVRQEVIDMVRAMHEAGFEVIMDVVYNHTCESGPEGPTICWRGLDNLAYYRRTKDKVSR LYDTTGCGNSLDFTNTHVTTFAVDSLRYWAKRIGIDGFRFDLAATLARLDGEFTRYHPFL YALRSDLLLGNLKMIMEPWDCGPNGWRTGQFGIPFAEWNDRFRDCTRTFWLTDVERARGG ETGNMTMQSMATRLCGSADLFATDPGRGSTASVNYVACHDGFTTADLTQYRHKHNEANGE NNRDGSDNNHSVNFGHEGPCSDPIITQQRERAIMNMLGTLLLSLGTPMLLAGDEFGNSQN GNNNAYTQDNETTWLDWDWLYSTEQTAELKLFNLTSRLIALRKARDLYNHEDFFTRLSKI GLLKKSDRVHWFLPNGKTPHDADWTNPSVRSFAMQLLSPDEPSLLILVNGSDENVRFHLP NDIEWEMIWSSAEIAGEYPGQGTQIEKLAEFDEEAEDKPAGRFRNHLQRLNTMYWQMDEN ADSLNSADDGLSEDDPTLWTLPALSISAMKQISTD >gi|148337405|gb|DS264454.1| GENE 448 500302 - 500703 587 133 aa, chain + ## HITS:1 COG:no KEGG:BAD_0314 NR:ns ## KEGG: BAD_0314 # Name: ywbC # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 133 30 162 162 276 100.0 3e-73 MAKAMSEFTTDLQHSGMPAKDLDETIEFYTKKLGFELAGLFHNGENRCAFLRYGHLTIET WEGDPAPLTTGAINHWAFDTPDIEAAFENAKELGLNFKDNEIQHIDSFWEHGIRYFNVYG PNGETIEFCQIVK >gi|148337405|gb|DS264454.1| GENE 449 500875 - 502005 1076 376 aa, chain - ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 10 363 6 371 385 99 24.0 1e-20 MKAQSALSVKEANLKAMTAFIYTQGSATKQMFEHELGLSLPTITQNLRAMEADGLIVKGE MQQSTGGRKAQIYEFAAHSSVAIGVRIQTTRITAIAIDLNGKSVATRQRTLPYRNNDAYY QRMNGIINDFAQELAKQGSTVRGVAFCMQGIVSADGQSITFGKIMNNTGLKLNELSHGLN YPSLMIHDSDASAMAELWFDHNLKDAVCIYLERRPRGAVIVDGSLYQGPNQCNGSIEHMT LIPGGNTCYCGQQGCMDTYCSPETLMEDGESLPGFFSVLEQGEQEHRERFSQWLDYVALA VTNIRSVLAGDVIISGEAAQYLDDDDMAGLRERVVEHTPFGTTDFTLRKGMALDHQDIIG AALRFVEPYVRELCDM >gi|148337405|gb|DS264454.1| GENE 450 502222 - 503490 1143 422 aa, chain + ## HITS:1 COG:BS_csbX KEGG:ns NR:ns ## COG: BS_csbX COG0477 # Protein_GI_number: 16079828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 2 399 13 402 435 257 36.0 4e-68 MKIGLPRTLLAGLVAIAVFMTGDGFELTFLSKYIVDQGFSSSQSSLMFTMYGLVAALAGW ASGVLAEMFGAKRIMLIGASAWVVLHLLFVGVALPSGVYPLMLGVYALRGVGYPLFIYSF VVLMAQTIDPAKLASAMGWFWAAYSFGIGVFGAYLPSFTIPMVGEYYSLWLSLPFSIAGL LICLLMVPKSKGSGTSSMSNADKLRELSRGVTILVHNRQIALAAVVRVICNLTLYGFPVI MPLYLATTNNGGGAWFKVSQWSQIWGFQFMVTIFGNVFWGRMGDSHGWMRQMRWFGCWFC VIGTLGMYYIPQFFGANMVLMCADAVVLGLGISAFVPMGAVFPALALEHKGAAISAHNFA SGLATFFGPLIATVLVSTIGFGGVCWTYAICYAIGSLVTFGIHPHQPGFDDRGHRIAAIE RN >gi|148337405|gb|DS264454.1| GENE 451 503563 - 504603 1134 346 aa, chain + ## HITS:1 COG:mlr4915 KEGG:ns NR:ns ## COG: mlr4915 COG1063 # Protein_GI_number: 13474107 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Mesorhizobium loti # 1 346 1 346 348 394 57.0 1e-109 MKAVVLEEQGVINVREVPDVPAPGLGELKIAPHTVGVCGSDLHYYTHGRVGKYVVEQPMI LGHEASGTVVEVGPGVEGFKVGDRVAMEPGIPDMSSRASKLGMYNVDPAVRFFATPPIDG CLCETVNHPAAFTYKLPDNVSFGEGALLEPLAVGMWSATKARIKPGDVCVVTGSGTVGML TASCALAGGASKVLISDVSAIKLAIAAQIPGIIPVDLTKEDLVERVREETGGWGADVAFE CSGSPKSYETFWKLIAPGGAAVIVGIPVSPVAIDITELQATEVRIENIFRYANVYQKAID LVANGKLNLKPFITDTYAMEDAKAAFDRMAEGRPGDIKLQITVNND >gi|148337405|gb|DS264454.1| GENE 452 504643 - 505614 165 323 aa, chain + ## HITS:1 COG:mlr4907 KEGG:ns NR:ns ## COG: mlr4907 COG2207 # Protein_GI_number: 13474103 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Mesorhizobium loti # 38 316 19 295 305 164 31.0 1e-40 MGAVVQVNDNRHGKAALAQTSFGGFVPKGGSSNDSGVLEIIVPDAQASVRWVKHGYPSSL AKWHHHPHIEIHLIREGTGLMMAGNAVVPYEAGQVALIGSNLPHNWVSDIAPGERLRQRD VVCHVRPETIRLLMSGFPETSGFAMVLRRAGQALVLSGESARQAGSILESMEEHSLACRV SDLIRVLDVFAHASADESYTVVASGYDPAVCSGAESVVNDAIEYISSHLSGEISLDLAAR QAGMSVSAFSRLFKRAAGIRFSDFVRRLRIGHACRLLTTTNQSVASIRRACGYGNASNFN RRFFEETGETPTGWRKKYIGRTR >gi|148337405|gb|DS264454.1| GENE 453 505574 - 505654 67 26 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISIISNFYKVYLLILSVQCIFSASQ >gi|148337405|gb|DS264454.1| GENE 454 505668 - 505850 112 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486743|ref|ZP_02028150.1| ## NR: gi|154486743|ref|ZP_02028150.1| hypothetical protein BIFADO_00568 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00568 [Bifidobacterium adolescentis L2-32] # 1 60 3 62 62 91 100.0 2e-17 MQYDFPLRRVAREILYSVHLMFRLRSFVKRKSFKNIILSVFVAFYHKSHTLSQVSPPHLL >gi|148337405|gb|DS264454.1| GENE 455 505968 - 508697 3739 909 aa, chain + ## HITS:1 COG:SP2026_1 KEGG:ns NR:ns ## COG: SP2026_1 COG1012 # Protein_GI_number: 15901847 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 1 465 1 463 464 563 62.0 1e-160 MADAKKEEPTKPTPEEKLAAAEAEVDALVKKGLKALDDFEKLDQKQVDRIVAKASVAALN KHLVLAKMAVEETHRGLVEDKATKNIFACEHVTNYLAGQKTVGIIREDDVMGIDEIAEPV GVVAGVTPVTNPTSTAIFKSLIALKTRCPIIFGFHPGAQNCSVAAAKIVRDAAIAAGAPE NCIQWIEHPSIEATGALMKHDGVATILATGGPGMVKAAYSSGKPALGVGAGNAPAYVDKN VDVVRAANDLILSKHFDYGMICATEQAIIADKDIYDPLVKELKRRKAYFVNAEEKAKLEQ YMFGCTAYSGQTPKLNSVVPGKSPQYIAKAAGFEIPEDATILAAECKEVGENEPLTMEKL APVQAVLKSDNKEQAFEMCEAMLKHGAGHTAAIHTNDRDLVREYGQRMHACRIIWNSPSS LGGVGDIYNAIAPSLTLGCGSYGGNSVSGNVQAVNLINIKRIARRNNNMQWFKIPAKTYF EPNAIKYLRDMYGIEKAVIVCDKVMEQLGIVDKIIDQLRARSNRVTFRIIDYVEPEPSVE TVERGAAMMREEFEPDTIIAVGGGSPMDASKIMWLLYEHPEISFSDVREKFFDIRKRAFK IPPLGKKAKLVCIPTSSGTGSEVTPFAVITDHKTGYKYPITDYALTPSVAIVDPVLARTQ PRKLASDAGFDALTHAFEAYVSVYANDFTDGMALHAAKLVWDNLAESVNGEPGEEKTRAQ EKMHNAATMAGMAFGSAFLGMCHGMAHTIGALCHVAHGRTNSILLPYVIRYNGSVPEEPT SWPKYNKYIAPERYQEIAKNLGVNPGKTPEEGVENLAKAVEDYRDNKLGMNKSFKECGVD EDYYWSIIDQIGMRAYEDQCAPANPRIPQIEDMKDIAIAAYYGVSQEEGHKLRVQRQGEA ATEEASERA >gi|148337405|gb|DS264454.1| GENE 456 509157 - 509465 520 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 204 100 6e-51 MAGQKIRIRLKSYDHEVIDQSAKKIVETVTNAGATVVGPVPLPTEKNVFVVIRSPHKYKD SREHFEMRTHKRLIDIVDPTPKAVDSLMHIDLPADVNIEIKL >gi|148337405|gb|DS264454.1| GENE 457 509483 - 510124 1095 213 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703] # 1 213 1 213 213 426 100 1e-117 MSNRTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDP TKVTKPLAGHFAKAGVTPRRHLAEVRTDNAEEFEPGQELTAELFPEGTLVDVTGTTKGKG FAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTI VSSDVENGVLAIKGAIPGPKGSIVLVRSAVKGA >gi|148337405|gb|DS264454.1| GENE 458 510131 - 510796 1131 221 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025340|ref|YP_909185.1| 50S ribosomal protein L4 [Bifidobacterium adolescentis ATCC 15703] # 1 221 1 221 221 440 100 1e-122 MANVTLNVTDNQGKATGTVDAPAEIFGFSAEEVQSRIPLIHQVVIAQLAAARQGTHATKT RGMVSGGGRKPWKQKGTGRARQGSIRAPQWYHGGTVFGPQPRDYSQRTPKKMKAAALKYV LSDRANAGHVAVVDFGVSEAPSTKAAVAALTPVTENKFTTVVLSRENVNEWLSVRNIPTV HPIFADQLNTYDVVTAQYVVFSKEGFDAFLAAKAEPAAKEA >gi|148337405|gb|DS264454.1| GENE 459 510802 - 511098 471 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 [Bifidobacterium bifidum NCIMB 41171] # 1 98 1 98 98 186 95 3e-45 MVAIHKPAHDIILKPVVSEKSYALSDRGQYTFVVAPNANKVQIKQAIEEIFNVKVTNVNT LNRAGKRQRTRNGFGQRVNQKRAIVTVAEGQTIDIFGN >gi|148337405|gb|DS264454.1| GENE 460 511135 - 511965 1448 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025342|ref|YP_909187.1| 50S ribosomal protein L2 [Bifidobacterium adolescentis ATCC 15703] # 1 276 1 276 276 562 100 1e-158 MAIRVYKPTTAGRRNASVSDFSELTRSTPEKSLVRKLSKTGGRNSYGRMTSRHRGGGHKR QYRLIDFKRWDKDGVPAKVAHIEYDPNRSARIALLHYADGEKRYIIAPEGIKQGDVIETG AQADIKPGNNLPLRNIPTGTVVHAIELRPLGGAKIARSAGAAVQLVAKDGAYAQLRMPSG EIRNVDARCRATVGEVGNSDHANIQLGKAGRARWMGKRPITRGESMNPVDHPHGGRTRGG KPPVSPWGKGEVRTRRPKKASNKMIVRRRPNGKNRK >gi|148337405|gb|DS264454.1| GENE 461 511981 - 512259 493 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025343|ref|YP_909188.1| 30S ribosomal protein S19 [Bifidobacterium adolescentis ATCC 15703] # 1 92 1 92 92 194 100 8e-48 MTRSIKKGPFVDAHLQKKVDEQNEKGTHNVIKTWSRRSMITPDFIGHTFAVHDGRKHVPV FVTESMVGHKLGEFAPTKTFKGHVKDDKKARR >gi|148337405|gb|DS264454.1| GENE 462 512276 - 512635 582 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025344|ref|YP_909189.1| 50S ribosomal protein L22 [Bifidobacterium adolescentis ATCC 15703] # 1 119 1 119 119 228 100 4e-58 MEAKAIARHVRVTPRKARRMVDLIRGKKATEAITILKFAPQDASLPVRKVLESAIANARV KADKAGEPFRENDLVVKETYVDEGVTLKRFRARAQGRAARINKRTSHITVVVANKEGNR >gi|148337405|gb|DS264454.1| GENE 463 512638 - 513441 1331 267 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703] # 1 267 1 267 267 517 99 1e-145 MGQKINPFGYRLGITENHCSKWFSDSNKVGERYRDFVLEDDAIRKAMSKDLERAGVSRIV IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQSNNRQGRRGDRRPRRGQ RNAAPQQNAAAEAPAAAEAPAATETKE >gi|148337405|gb|DS264454.1| GENE 464 513449 - 513868 728 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025346|ref|YP_909191.1| 50S ribosomal protein L16 [Bifidobacterium adolescentis ATCC 15703] # 1 139 1 139 139 285 100 4e-75 MLIPKRTKYRKQHRPVRRGMSKGGNEIAFGDFGIQALAPAYVTNRQIEAARIAMTRYIKR GGRVWITIFPDRPLTKKPLGTRMGSGKGTPEFWIANVHPGRVMFEIGGVSEDVAREALRR AIDKLPMKCRVIAREGGDI >gi|148337405|gb|DS264454.1| GENE 465 513868 - 514125 422 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025347|ref|YP_909192.1| 50S ribosomal protein L29 [Bifidobacterium adolescentis ATCC 15703] # 1 85 1 85 85 167 100 1e-39 MAVGTADYTMKNLNEKTNEEIEGFLKKSKEELFNLRFQSATGQLENTARLKAVKHDIARM YTILRERELGISQAPEATETKAEEK >gi|148337405|gb|DS264454.1| GENE 466 514125 - 514385 438 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025348|ref|YP_909193.1| 30S ribosomal protein S17 [Bifidobacterium adolescentis ATCC 15703] # 1 86 1 86 86 173 100 2e-41 MAEERNFRKVRRGYVVSDKMDKTISVELEQRSTHPLYGKVVRSTRTVKVHDEHNEAHIGD LVSIMETRPLSKTKRWRLDSIIERAK >gi|148337405|gb|DS264454.1| GENE 467 514477 - 514845 604 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025349|ref|YP_909194.1| 50S ribosomal protein L14 [Bifidobacterium adolescentis ATCC 15703] # 1 122 1 122 122 237 100 1e-60 MIQQETRLHVADNTGAKELLAIRVLGGSKRRYAGIGDVIVASVKDAIPGGSVKKGDVVKA VVVRTVKEHRRVDGSYIKFDENAAVILGSGREPKGTRIFGPVGRELRDKRFMKIVSLAPE VI >gi|148337405|gb|DS264454.1| GENE 468 514847 - 515182 541 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025350|ref|YP_909195.1| 50S ribosomal protein L24 [Bifidobacterium adolescentis ATCC 15703] # 1 111 1 111 111 213 100 2e-53 MAAKIKSGDLVKVIRGKDRGKEGTVKQVLKDDRLIVEGVQIVKKHVRATQQGQQAGIVAV EAPIHRSNVMVIDPETKQPTRVRIVEKEEARDGKVKTVRVRVAKKSGKELA >gi|148337405|gb|DS264454.1| GENE 469 515179 - 515751 978 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025351|ref|YP_909196.1| 50S ribosomal protein L5 [Bifidobacterium adolescentis ATCC 15703] # 1 190 1 190 190 381 100 1e-104 MTDTTVEAPATPRLKQKYNEQIVPELEKEFHYSNPMQVARVQKVVVSMGVGAAARDSKLI EGAVKDLTLITGQKPKITKAKKSVAQFHLREGQAIGAYVTLRGERMWEFLDRLLTMALPR IRDFRGINGDQFDGQGNYNFGLTEQSMFHEIDPDSIDHQRGMDITVVTSTKDDKEARVLL KHLGFPFKEN >gi|148337405|gb|DS264454.1| GENE 470 515753 - 515938 331 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025352|ref|YP_909197.1| 30S ribosomal protein S14 [Bifidobacterium adolescentis ATCC 15703] # 1 61 1 61 61 132 100 5e-29 MAKTALKNKAAAKPKFKVRAYTRCQVCGRPHSVYRKFGLCRICLREKAHRGELPGVTKSS W >gi|148337405|gb|DS264454.1| GENE 471 516023 - 516421 669 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025353|ref|YP_909198.1| 30S ribosomal protein S8 [Bifidobacterium adolescentis ATCC 15703] # 1 132 1 132 132 262 100 3e-68 MTMTDPIADMLTRLRNASAAKHETVDMPYSKFKANIAEILKREGYIKDFTAKEAKVGQTL EVTLKYGPNGERSIQGIKRISKPGLRRYAKSDALPMPLGGLGIAIISTSSGLLTQKECLD RGIGGEIVAFVW >gi|148337405|gb|DS264454.1| GENE 472 516439 - 516978 920 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025354|ref|YP_909199.1| 50S ribosomal protein L6 [Bifidobacterium adolescentis ATCC 15703] # 1 179 1 179 179 358 100 2e-97 MASHIGKLPVTIPAGVEVKIDGQSFTAKGAKGTDSYEIPEGITAVVEGNEVVLTPADDLR PTRAKHGLARSIVAGMVKGVHEGYAKTLEIVGTGYRAQMKGKGIEFSLGYSHTITVEPPA GIEFELPNPNQVIVKGIDKQAVGQCAANIRKLRAPEPYKGKGIKYADEHILRKAGKAGK >gi|148337405|gb|DS264454.1| GENE 473 516978 - 517349 608 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025355|ref|YP_909200.1| 50S ribosomal protein L18 [Bifidobacterium adolescentis ATCC 15703] # 1 123 1 123 123 238 100 4e-61 MSVQILGKGKKVALKRRHARLRKHISGTPELPRLVVTRSNRHMVAQIIDDTKGVTLVSES TLTSDFAGFEGTKTEAAKKVGELIAKKAQDAGITAVVFDRGGNKYHGRVAAVAEGAREGG LAL >gi|148337405|gb|DS264454.1| GENE 474 517346 - 518071 1195 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025356|ref|YP_909201.1| 30S ribosomal protein S5 [Bifidobacterium adolescentis ATCC 15703] # 1 241 1 241 241 464 99 1e-129 MSDNEKETQVAEETQNTQAAAESNNEDRKSRRGQRGEGRRGERRNRREESHENEMLDRVV TINRVSKTHKGGRTFSFAALVVVGDGKGTVGVGYGKSREVPAAIAKGQLDAKKHMFTVPR IKGTVTHPVIGHDAAGTVLLRPAAPGTGVIAGGAVRAVMECAGITDVLTKSMGSATAVNV VRATVDALKKLEEPEEIAARRGMSLEEVAPDALLRARAEGIAEARKAREEAQAKAAQKDG E >gi|148337405|gb|DS264454.1| GENE 475 518068 - 518253 302 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025357|ref|YP_909202.1| 50S ribosomal protein L30 [Bifidobacterium adolescentis ATCC 15703] # 1 61 1 61 61 120 98 1e-25 MMTNLNIKLHHGLVNSTPKQRAAAQTLGLNKIGKTVTREDTPALRGQLQVLRHLITVEEA D >gi|148337405|gb|DS264454.1| GENE 476 518256 - 518702 752 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025358|ref|YP_909203.1| 50S ribosomal protein L15 [Bifidobacterium adolescentis ATCC 15703] # 1 148 1 148 148 294 100 7e-78 MADILQMHDLKPAPGANKDRIRVGRGEGSKGKTSGRGDKGTKKRYQVRPGFEGGQLPLYM RLPKLRGFKNPFKKEYQVVNVAVLAELFPQGGEITVADLVAKGAVRNGFPVKVLGDGEVS AAYTLKGVKASASAKSKIEAAGGSISED >gi|148337405|gb|DS264454.1| GENE 477 518931 - 520268 828 445 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 9 435 19 437 447 323 41 1e-86 MRTLIQALKTKELRNKILFTLGIIIIYRIGSFIPTPGVDYTVVQQCVGKMNNASENFIGL VNLFSGGAMLQLSIFALGVMPYITASIVIQLLRVVIPRFEALHKEGQSGEAKLTQYTRYL TIGLAVLQSTTILVTARSGALFNYQCSQVVPDGSVWNLVVMVLIMTGGTGLIMWMAELVT DKGLGQGMSILIFMSICSGFLPQLWEIGWGTNGTDGNWGKFAAVVGTLLVIMILVIYVEL AQRRIPVQYTRRMIGRKMYGGSSTYLPLKINMSGVIPPIFASSILAVPTLIAQFGNSDQS WVKWINSNLANTTSVWYIALYALMIVFFCFFYTEITFNPDETADNMKQYGGFIPGIRAGS ATSNYLSYVMNRLNTVGAVYLLFVALIPTVLIMALNLNTKLPFGGTTILIIAGVGLDTLR QAKAQTEQFQYAGFLFEDTDHKEGK >gi|148337405|gb|DS264454.1| GENE 478 520386 - 520946 866 186 aa, chain + ## HITS:1 COG:XF0275 KEGG:ns NR:ns ## COG: XF0275 COG0563 # Protein_GI_number: 15836880 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Xylella fastidiosa 9a5c # 1 186 12 197 198 176 49.0 2e-44 MRLLIMGPQGVGKGTQAALLSEHYGIPAISTGDIFRYNIKNKTELGVEALKYIDKGELVP DELTNKIVKDRLAMDDAKNGWILDGYPRNASQVEALDAILGELDTPLDAVVALDADHDVL MERMKKRAEIEGRSDDTPEAIAKRLDVYAKETAPLLDIYQKRGLLKTFNGVGAVDEIQAT IVAELG >gi|148337405|gb|DS264454.1| GENE 479 521094 - 521312 285 72 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 1 72 1 72 72 114 76 1e-23 MAKDGVIEVEGQVVEALPNAMFRVELENKHIVLATISGKMRKNYIRILPQDRVVLEMSPY DLNRGRITYRYK >gi|148337405|gb|DS264454.1| GENE 480 521336 - 521449 200 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|23466153|ref|NP_696756.1| 50S ribosomal protein L36 [Bifidobacterium longum NCC2705] # 1 37 1 37 37 81 100 7e-14 MKVSPSVKRICENCRVIRRHGRVMVICVNPRHKQRQG >gi|148337405|gb|DS264454.1| GENE 481 521553 - 521963 687 136 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|118764947|dbj|BAF39126.1| 30S ribosomal protein S13 [Bifidobacterium adolescentis ATCC 15703] # 1 136 1 136 136 269 99 3e-70 MQDLRKTEGIAMARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLT DEQLITLRDYLEGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNART RKGPKRTVAGKKKATK >gi|148337405|gb|DS264454.1| GENE 482 522048 - 522446 667 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025364|ref|YP_909209.1| 30S ribosomal protein S11 [Bifidobacterium adolescentis ATCC 15703] # 1 132 1 132 132 261 100 5e-68 MAAQKQAARKPRRRDRKSVPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRK STPYAAGMAAESAARKAMEHGLKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQA HNGVRPPKRRRV >gi|148337405|gb|DS264454.1| GENE 483 522527 - 523525 1442 332 aa, chain + ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 323 1 322 347 453 73.0 1e-127 MLIAQRPTLTEESLNPQRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGVP HEFTTLPGVEEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGKGEATAGDITPPAGVTIAN PDMHIATLAEDGELEIEFTVERGRGYVPAQMNKQDNAEIGRIPVDSIYSPVLKVSYRVEA TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNTQAEGVEVGPAPVA EETNPEMNIPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKEK LQSLGLALKASPLGNFDTNNLEGGTFFSPEDE >gi|148337405|gb|DS264454.1| GENE 484 523614 - 524081 761 155 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025366|ref|YP_909211.1| 50S ribosomal protein L17 [Bifidobacterium adolescentis ATCC 15703] # 1 155 1 155 155 297 100 7e-79 MPTPKKGPRLASSPAHERLMLANMATSLFQNGRITTTLPKAKRLRPLAERLITLAKRGDL HNRRRVMRVIRNKSVVHKLFTEIAEQMEQREGGYTRIVKIAPRRGDAAPAAIIELVTEPV SPKQAVVKEAEAATKVAAAEAPEAAAEEATAENAE >gi|148337405|gb|DS264454.1| GENE 485 524188 - 525108 845 306 aa, chain + ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 5 305 22 296 297 197 41.0 2e-50 MLDAVRLRIDLAYDGTGFYGWAKQPEIRTVQGEIERVLHTILRVPEGDPTEPLRLTVAGR TDTGVHASHQVCHLDVNEDVLKRCVGHMDVPPVIALTRRLQRMLPADIAIRGIAPAPNGF DARFSALERTYVYRIADRSSEVDPRTRNFVLHIDDELDLKAMNEAAAMTIGLHDFGSFAT PNPGGTTIREVKTAYWRRVPQRTLIDDGMTMGERYRTPTVESGLVCFVIVADAFARNMVR SLVNGCVQVGIGKRSLDWFAGKMAAPLREGSTGPIAPQGLTLEHIEYPADDQLAVRAEAI RAKRTL >gi|148337405|gb|DS264454.1| GENE 486 525285 - 527465 2840 726 aa, chain + ## HITS:1 COG:DR2042 KEGG:ns NR:ns ## COG: DR2042 COG2308 # Protein_GI_number: 15807036 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Deinococcus radiodurans # 11 459 39 482 655 375 45.0 1e-103 MIESAARRLASELVDRRESINRELSRNGVRFGIYKNGEYHDRLFPYDPIPRIIESDEFDR MEAGLKQRVNALNAYLRDIYSDKQAIKDGIVPEEYVYTSAGYFPQVNGVTPPGGVFAHVA GEDLVQGQDGQWWVLEDNLRIPSGASYPLFARDIERRITPSLFRNVRVRDNRDYPRLLRQ SMDFVSTDGIAVVLTPGRYNSAFFEHAYLAEKTGAALAFPEDLEVVDNKVYFLDYAGRKH RVGVVYRRLSDEYLDPFAFNPDSVIGVPGILSAYRSGNVAIVNAPGNGAADDKAIYYFVP NMIRYYLGEEPILHNAPTYMPMFDKDRKEVLDRLGELVIKDVAEAGGYGVVFGSSLDRSR REELAERIKAEPRRFIAQEVIQFKDIDVVDPETGQMSPRKCDLRAFVVTGKNTHAWYSGL TRYSSIPGQMIVNSSQGGGFKDTWVLAKETGVEHDYAPGSEVVRVLEQSRKHSLALVTAS KADNLFWLGRYTERVFTTLSQFFPFYDRVMDTDVDAFRPFARALDLPEDFEDFDAFIHSF LYDEKNPDSVRSAIVYAFNNAVILRPELGSRSLQQVELAMSSIVEASEYGGTDADIFKHR DIADNMLAFWGGVENSPVEPTLKSFIFVGKYLERLDLYTRFGYSVEELKAPLAKLGSYIL PLNGLPVPQCFAEGLRWLVGQLPQRGYAELAEKLGMLLKDFDGRISTKDLKDLGMLNTMD MDAARL >gi|148337405|gb|DS264454.1| GENE 487 527570 - 528370 994 266 aa, chain + ## HITS:1 COG:AGc4251 KEGG:ns NR:ns ## COG: AGc4251 COG1305 # Protein_GI_number: 15889617 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 3 239 2 241 273 108 30.0 1e-23 MKKLVFDYEMKLSFSSPVTDHRFQLRCIPATGPRQQVIDVAVKIEPDVELETTIDSFDSV VMTGFIPEPHTMFNYSVTGIAFVDNAHIKSEIYKPLYRFNSALTVPGPAIEALIGICRER IASLPADCTPIDQAREVMDEVFKTFVYTPASTTIRTTAEEAFAQRKGVCQDYAHVMLSVC RHVGLTARYIAGLLGGEGATHAWVEIYHDGRWVGLDPTHNRMVDDNYITIAHGRDYRDCM LDIGIFSGCDVKQDQWVNASVHEQGY >gi|148337405|gb|DS264454.1| GENE 488 528677 - 529561 697 294 aa, chain - ## HITS:1 COG:no KEGG:BAD_0352 NR:ns ## KEGG: BAD_0352 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 294 1 294 294 481 98.0 1e-134 MQTRTPSFRSVSFIAKRVCALLCTAILMPALTACSMPRIAGRAEAEQRQSPCEKAYFDAT ADNKIAHDQHQHIIRRYFSAQQAVSAWTNTAAQCPARFAEGALRSAQARHMARALGDQLS VAVAPITLSRFDDVESLDVDSKSLATAAQAEDRAGFAMEVLAARNSGHATLDISDRHKTT SQRFASFSGTIDDRRKTYEATALLAHPDTMLDSATGLTAPTDATIEMNCARSEITAIAGS SNAANDHSQSRVTNAKQSTDSRAQSLGVLAGLIADRVELALDWGYPSFDEALFA >gi|148337405|gb|DS264454.1| GENE 489 529639 - 530691 551 350 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 11 342 17 361 537 216 37 1e-54 MELDLAGMHQLAAGQGIDPETLDAALSEALRLAYLKTPHAAKHARVELDPRAGSFTVWAQ DEIPGEPTEDDPHPAPTLGEEYDDTPHDFGRLAAATARQVISQLFRKAEDDKVFGAFSGQ KGKLITGIVQQDVKDTSNVHVAVGDVEALLPRREQVPGERYRHGERIRVYVVNVARGLKG PEIVVSRSHPELVRRLFEREVPELVSGAVSIMAIAREAGARTKIAVRANTEGVNPKGALI GPGGARVRAVMENLGPEKIDIVDWSADPAKFVAAALSPAVATGVQVISEKNKTAIAFIHD DQLSLAIGKEGQNARLAAKLTGWKIGIESAEAHAKKMAESADHSDGETEE >gi|148337405|gb|DS264454.1| GENE 490 530904 - 533699 2989 931 aa, chain + ## HITS:1 COG:MT2905 KEGG:ns NR:ns ## COG: MT2905 COG0532 # Protein_GI_number: 15842380 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium tuberculosis CDC1551 # 290 930 263 899 900 730 63.0 0 MPKARVYELAKELGVDSKTVLSKLEAMGEFVKSASSTVEPPVARKLRNAFASSGQGNASD SKKPGHTAKKPVEPASHSMPKPAAPSAPKPAAPAAPKPHHAASKSDAPKPGHRAPRPGES RQHGNRPNGNAPRPQGGDRRQSGRPTAVPGARPQHGNAPQGGNNANGAKPHTPGPRPGNN PFSRKQGMHTPTPGDIPRPHPMNRPSVNNGEGRRGGRPGQGGGQRGGFRGRPGQGGAKPG QWGQHRPGQGGGQRPAGGGNRFGGNGGGFQGGNSAPSNGPARGGRGRGGAAGAFGRQGGK SSKARKNRLAKRQEFQEMKAPVIGGVRIPTGNGQEVRLRQGASLADLAEKINVNPAALVT VLFHLGEMATATQSLDEATFQILGEEIGWNIKIVSAEEEDKELLQQFDINLDEEELQEDE DLKPRPPVVTVMGHVDHGKTRLLDTIRRTNVIEGEAGGITQRIGAYQVTVNLEGEPRKIT FLDTPGHEAFTAMRARGAELTDVAILVVAADDGVMPQTVEAINHAQAAHVPIVVAVNKID KPGANPDKVRGQLTEYGLVPEEYGGNTMFVDISAKQGTNVDKLLEAVLLTADAELDLRAN PDMDARGATVEARLDKGRGAVATVLVQSGTLHIGDAIVAGTSYGRVRAMLDENGNHMQEA GPSTPVQVLGLTSVPTAGDLFLVASDDRTARQIAEKRQATERAAQLAKRRKVVSLESLKE QFAKSEVDMLNIVIKGDSSGSVEALEDSLMKIEVSDEVGIQVIHRGVGAITQNDVNLATV DKAVIIGFNVRPNRQVADLAEREGVEIKYYSIIYKAIEDIEASLKGMLKPEYEEVVTSHS EIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRNGIATVNDLEISSLRRFKDDVNSVKE GYEAGINLGTFNDIEIGDIIETFEMQEIERK >gi|148337405|gb|DS264454.1| GENE 491 533809 - 534312 713 167 aa, chain + ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 5 141 4 140 149 106 48.0 2e-23 MAGTNPRAARIAALIQRVIASSMEAQLHDKRLANVTITEVRVTNDLQIAKVYWTQLGHEG HEQGERRRAQQALNQAKGRLRSLVGTKAGLRLTPQLEFIFDEVPGEAHEIEDILALAHKR DEELAKSRANAQYAGDADPYKHDEPDDDDFDDDDDVEVEDWDDDDEA >gi|148337405|gb|DS264454.1| GENE 492 534296 - 535366 1128 356 aa, chain + ## HITS:1 COG:ML1546 KEGG:ns NR:ns ## COG: ML1546 COG0130 # Protein_GI_number: 15827813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Mycobacterium leprae # 9 250 13 221 320 197 48.0 2e-50 MTTKPDNSGLLVIDKPQGVTSHDVVAAVRGALQMKRVGHAGTLDPMATGVLVVGFGNATR LLNYIVDHDKTYLATIRLGQRTTTDDADGELLPEEGTIAEFPSRQTVEDVIAHHFTGRIE QVPNSYSAIKINGQRAYDLAREGKDVDLKARPVTISEFSVSAVRYGYASTTCAGSPLADA VEIAPEESWHAETDGQNEPNMQPVMELDVAVTCSAGTYIRALGRDLGSELGLGGHLTMLR RIRVGRFSVDMPNVMTAHTEAKTFTNREGIEVTRNRAVLDDAEHAVDHALDLVASAAASM DMLPVTEQEATDLRFGRRIAHDIHTTMAAYVPETNDLVAIVERAKRGETKPVAVFN >gi|148337405|gb|DS264454.1| GENE 493 535436 - 536665 1572 409 aa, chain + ## HITS:1 COG:Cgl1932 KEGG:ns NR:ns ## COG: Cgl1932 COG0196 # Protein_GI_number: 19553182 # Func_class: H Coenzyme transport and metabolism # Function: FAD synthase # Organism: Corynebacterium glutamicum # 25 409 17 327 341 149 32.0 1e-35 MKTITLTPDASGMVDWPTLSNDKKSVVTIGSFDGMHQGHQAVIRRVAELAEQEQAFSVVV LFDPRPALVHAYAAKHDGQEPPAGTPDTQALTSVDERLRAIDAIGVDYTLIVRYTMAFSA KSYRFFLGQMVGKLGMRTLVLGSDAAMGANRAGNVKAIENLALATGVFQLEVVDDFGPGL TRVPVNAKPVMPSEPGEPSDPLEGASKAERRAWSKKHQAKEVRTWSSTNVRYLLSQGRIK DADAILGHAHAVEGTVVHGEERGRTIGFPTANLSENVAGYLPVDGVYAGWLVDLGEKSAD GGEEAGEKPADGVSQQYDASSVNARVAMQSPHRWPAAISIGTKPTFNEDGDAERVVEAYA ITDDWLDLYGHQARVEFAGFLRPQIKFDSADDLVVELKRNVEETKRLTA >gi|148337405|gb|DS264454.1| GENE 494 536796 - 538214 1283 472 aa, chain - ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 444 1 427 458 374 44.0 1e-103 MAKTSSQFLCSECGWSGPKWLGRCPECGQWGTIEEFHEARPAAGSRTAAPGRTSRTQSHP VASSAARPITDIGTEDISRIATGFSEFDRVLGGGIVPGSVTLIAGEPGIGKSTLLLETAG NVARLTAFATERNTVLYISGEESQAQVRMRASRIGAMEPNLLLASTTDLSTVLGLIEQFK PALAIVDSAQTIVSQDVDGISGGSTQVREVASALIDTAKTLDIPVLLVGHVTKDGSIAGP RTLEHLVDVVCQFEGDAETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVTDPSGLFLST GNGSAATQVDGTCVTFTLDGHRSLPIEVQALVTKSVLPTPRRAANGVDSNRIAMLVAVLY RHGGINLLANDLYISTIAGGQAREPGCDLAIVAALASAAKSKPIPRTTCAIGEISLTGQV RPVPRLEYRLREAARLGFTTAVVPTLRKNVAVPGMGVVQADTLQDALAAILR >gi|148337405|gb|DS264454.1| GENE 495 538364 - 539008 711 214 aa, chain + ## HITS:1 COG:no KEGG:BAD_0359 NR:ns ## KEGG: BAD_0359 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 214 4 217 217 326 99.0 4e-88 MSDTQNSSSHGKLIAAVVAAALVVVLALISAFVWPGWALNKNGQAGQAGQTSQQASTSNG TDGDKTEPTKPSIDAVALPDGASELLKAMPDSVLNYARTKADASTTWSSTSPVEEYALTY STGKKGQDVTLEVGQWNDGDKAKSQYDTLAEAMTGKELGSGNVKVSGKTTGAYSAKADPD DDTKAVAVWRNDTVVFYATGAKNDVQRFYQQFPL >gi|148337405|gb|DS264454.1| GENE 496 539183 - 539272 145 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSVIKKRRKRMSKKKHRKLLRKTRHQRK >gi|148337405|gb|DS264454.1| GENE 497 539407 - 540105 1158 232 aa, chain - ## HITS:1 COG:L0045 KEGG:ns NR:ns ## COG: L0045 COG0120 # Protein_GI_number: 15674215 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Lactococcus lactis # 7 228 2 223 224 244 55.0 8e-65 MDKAQQDALKKAAGIEAAKLIQNGMIAGLGTGSTVRFLVDELGRRVKEEGLEFTGVTTSR RTQEQAEGYGIKIVNIDDVDHIDVTIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV WIVDESKVVDTIGKFPLPVEVIPFGAGQVVKKFEAKGYKPVLRLDANGEPVRTDENNYVV DLHLERIDHPQELAQDLITTVGVVEHGLFLNMVDQVIVGDPNGPRVMDNPNK >gi|148337405|gb|DS264454.1| GENE 498 540326 - 541663 1373 445 aa, chain - ## HITS:1 COG:STM0263 KEGG:ns NR:ns ## COG: STM0263 COG0328 # Protein_GI_number: 16763646 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Salmonella typhimurium LT2 # 3 151 5 141 155 99 41.0 9e-21 MTITVSTDGSALGNPNGPMGWAWADHEPAAGGKPGHEHAGDCDAGGATNGTNQIGELCAV LEALRAHPGSEDLVIETDSQYAINCSTKWVQGWKRNGWKNSQKKPVKNADLIRAIDNEIA HRAGSVRFVWVKGHAGNAGNEKVDELARTYAGDCRSHVREGYLPLEGWQSLLASEYSRGT DVPEDARMLMDGAISAAEYHMGRGQGDSATTGTGDSSADTANSSNSTKPRSIASMLAEPE GVSHDLADFGQTTDDDADDAVETTVLETEPAETTTMLETEATKVIPESSFPDAGGPAEPD ESGKTDESGEPHQSYAQMLVKPDYFPREGDENDKPVTGNADGTDTDSTAVPQNANESHSE SQDDEESAPEQAASSQSQDLPKLPHRPSPSGLSVSGTVRFTPPPESSPTFDGNPRLIRGY IAVEGYVMGDGTLVLDEAPFAVKHS >gi|148337405|gb|DS264454.1| GENE 499 541768 - 543156 1480 462 aa, chain - ## HITS:1 COG:lin0802 KEGG:ns NR:ns ## COG: lin0802 COG2972 # Protein_GI_number: 16799876 # Func_class: T Signal transduction mechanisms # Function: Predicted signal transduction protein with a C-terminal ATPase domain # Organism: Listeria innocua # 186 458 167 431 433 60 20.0 8e-09 MFAPLGEIIRNGIAQTTPSGLFFAIGEQLNALSGLALCLIMAWSHMDNPRRNGTLFMSIG LVWFLLCGVLCGTLGIPSLWTVIPTAPLVLLVLRWLTELPWRQLLLIVATASYMVAIVYY LSLVIDVAVLGADSTNLRVGWPGLVNLLLLDVVVLVSLWHPLHDSIPVTFDSPSISKGFW QLIWLFPFVSSAIVVWCMPADNSTLLDSHMLEIAFTVAVVYSCFMVLVYFLIWYMIQQSD RLLAARRRQHYEALQTLQLQHMNERIREARQIKHNVRHHIHSLQALAAAEDMDGIRSYLD EMSKHRLLQTAPMQYCEHASLNAVLVYYCDWVRHLGADVDVKAAVPQYININNAELCSMV GNLLENATEAITQQTQGERRLKVRIRYRSGPPADLFITVDNTYGDADTSIEQIDGDLVST KHGGTGLGTATVRETAERHHGTASFEHSDGMFRASVMLCLGD >gi|148337405|gb|DS264454.1| GENE 500 543158 - 543973 824 271 aa, chain - ## HITS:1 COG:BS_lytT KEGG:ns NR:ns ## COG: BS_lytT COG3279 # Protein_GI_number: 16079944 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Bacillus subtilis # 49 250 37 230 241 67 27.0 2e-11 MRIAIVEDHPAERELIATMCAEYFNGRNVGATAGRNAMQTVCDVFPDAKSFIESWKNSRY DLLLLDCYLSDENLPHATTGLDIARLLRNQNDDCAIVFITSSTDFAVLGYEVQASGYLLK PVNRKTFEATMERVEEQLKAKPPVTHLAKAQSPGTVDSSWHVAFGNPAVTMDRRLIAYAL SNAHYVEFTFADGTQTKIRTNFSDVDQRLTVFDNFYRTARGVLVNFDYVSGITNAQFVMK GGKRIPITKTAVTTTCRAYAEYTFTRMRTED >gi|148337405|gb|DS264454.1| GENE 501 544189 - 545844 2408 551 aa, chain - ## HITS:1 COG:sll0726 KEGG:ns NR:ns ## COG: sll0726 COG0033 # Protein_GI_number: 16332219 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Synechocystis # 5 550 30 567 567 611 57.0 1e-174 MPATPADLINVDEVIGKYYDVVPDPNVPEQRVSFGTSGHRGSSLKTSFNEAHIVAITQAI AEYRKKAGVTGPLYIGRDTHALSEPAWKTAIEVLVANGVTVRIDSRDDFTPTPVVSQAIL THNRAADGTQRFTGEGLADGIVVTPSHNPPTDGGFKYDPVTGGPAPADVTNAIADRANEL LGDFRNVKRVPFERAVKSDLVERFDFREHYVADLENVIDFDVIRSSGVRLGIDPLGGASV NYWPLMNEKYNLTIDVVRPQVDPTWSFMTIDHDGKIRMDPSSPYAMKGLVDSLNNGAWDK YDLVGGTDPDADRHGIVCPNWGVMNPNHYIAVCVEYLFGGNRPDWPENAGIGKTLVSSSL IDRVAASIDAKLVEVPVGFKWFVDPLFKGEVAFGGEESSGMSFLRKDGRVWTTDKDGLIP DLLAAEITAKTGKNPAQLHQEQVERFGESWYKRVDTPTTLEQKQKFAKLTGDDVEATQLA GEDITAKLTEAPGNHAKIGGLKVTTKDNWFAARPSGTENIYKVYAESFESPEALDKVLAE ATEVVDKALAE >gi|148337405|gb|DS264454.1| GENE 502 546186 - 548279 2877 697 aa, chain + ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 121 512 1 367 415 365 50.0 1e-100 MADSLASQIITAIGGPENVRSLTHCATRLRFELADASKVDQNALEHMKGVLGAVPQSGDR FQVVIGGGVATVYENIMHLPEMANAGAASASGEGQKSNADVKAEARSKARGKVAWLDSFF EYLADSFRPILGVLLGASIIIALVNLLISLNVIPNDEASAGWVFVKAIWKGVFYFLPIMV AYNAAKKLKVDPWLGGAIMAILMTPQFTSLIDAKTTTCVENAALGTKSCTANIFGIPMAL SDYSGNVFVPLLMAAVLALVYHGLKKIIPESVQLVFVPFFCMIIVGALTAFIIGPIGVWV GNGLGVGLAWMNTHAPFIFAIIIPLLYPFLVPLGLHWPLNALMLMNIQTLGYDFIQGPMG VWNFACFGATAGVLFIAVRDKDKDMRQTALGALAAGLLGGVSEPSLYGIHLRYKLVYKRM LVGCGLGGVVIAVLGWLFPSVTAAGQTVHGVTTTAFAFTSLLTIPVFDQMWVYAVSIAVS FLTSFFLIITFDYRTPEQKAEVLARAAADQKAAAPAVEAKEAAPAATTATATATATKTEA PAAAAAATTVVNAPVAGHVIALDETGDPVFASRALGEGVGIQPTDSEVVAPVSGVLQTVA ETGHAFGIKTDDGVEVLVHVGIDTVKMNGEGFAVKVKADERVNAGDPLVSVDFAKVKDAG YSTTTLMTVLNTAALTSVTPKTGIDVKAGDEVIDIQR >gi|148337405|gb|DS264454.1| GENE 503 548311 - 549159 761 282 aa, chain + ## HITS:1 COG:Cgl2781 KEGG:ns NR:ns ## COG: Cgl2781 COG3711 # Protein_GI_number: 19554031 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Corynebacterium glutamicum # 93 273 1 188 197 155 43.0 6e-38 MDVLRVFNNNVVLARDGDREVILTGRGIGFQAKPGQHVDDAKIVRRFIPVDGKDPDHMAQ QVAGIPPEIIRLVTDAMNRTGLKEQADKQPTLVMALADHICGAIQRAQRKQNIEYPLEAE VRSLYADEYAKGVAMVDAMNTYLGGALPRSEAVALALHLVNAGFSGGDLSATYTMTGIIQ QMIAVIEGAYGITLAQDSVNVARFITHLRYLFVRIHQHEQLDDEPQPIIESIKTSYPKAC QCARQLAVVVKMRLGSDLTEAEIAYLALHVARVTNGVNRQDD >gi|148337405|gb|DS264454.1| GENE 504 549214 - 550401 1315 395 aa, chain - ## HITS:1 COG:sll0036_2 KEGG:ns NR:ns ## COG: sll0036_2 COG1597 # Protein_GI_number: 16331996 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Synechocystis # 47 339 5 289 309 85 28.0 2e-16 MPVIVLLVIIAVVAVCAAAFFGYRAYKHRTLAEKLDKRDDDQVHYAFIVNPSKPQAEQRK QHIKEFCEAKHLTQIEFIETQLDKDGRACAFEALDHGADVVVAVGGDGTVRTVASALSGT GHALGIVPIGTGNLFARNMGIPVDDIDAALTVATSHGSRLVDVGRLTLLDDETTDHGHAF LIIAGIGFDALMIDDTDPELKKNISWLAYFVSGVKNLFAPKYKGNVTITSADGSTHSTRG LTFRTFMAGNCGQIPMFSLMPEASYDDGILDYEIIDTSGGLIGWANLFGDVLHQTITGKA QQSPLSTNSTVDQVQGVSAEITLERPVLAQVDGDMLPETKHIRFSVERQALCVRVPEATS EDTGILALNANMSATPTKPQPTEQASGQPAEQSND >gi|148337405|gb|DS264454.1| GENE 505 550496 - 551821 1872 441 aa, chain + ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 10 438 7 429 432 475 57.0 1e-134 MASVSAFGTRLGSMLDIQFIREHADVVKESQRKRGESVELVDEVLRSDEVRRSSLKEFEA ARAQQKEIGKKVAAAPADEKAKLIAATKELSQKVSEYKAAADAAAEEYTTAMWKLSNIVE PEAPEGGEDDYVVVKKVGQIRDFASEGFEPKDHLTLGRGVAGIDMERGVKVGGSRFYFLR GQVARMQIAMLTMAVDQAEEHGFTLAITPTLVRPEVMRGTGFLNSHADEIYRLREPDDQY LVGTSEVALAGMHENEILNLENGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMF VYAKQEDSYKEHEHLLAMEQEMLGKVEVPYRIIDTAAGDLGSSAARKFDCEAWVPTQGRY RELTSTSNCTEYQARRLNIRERMEDGNTRAVSTLNGTLATTRWLVAILENHQQKDGSIEI PKAMRPYMGGKEVIEPTKWEA >gi|148337405|gb|DS264454.1| GENE 506 552221 - 552901 866 226 aa, chain - ## HITS:1 COG:Cgl0595 KEGG:ns NR:ns ## COG: Cgl0595 COG2197 # Protein_GI_number: 19551845 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 8 223 2 227 230 206 52.0 3e-53 MNEREQGIRIAVVDDHEMFRAGVIATLQPYFDVVGQAADVEGSVAMIAQTKPDVVLLDVH VPGGENGGGTEILTKSRTYSPDTVFLALSVSDSPQDVGSVIRAGAQGYVTKTISGDDLVS SIKQVYEGYAVFSPKLAGFVLSAFQNGPSANGAFGGPIHDDELDRLSNREQEVMRLIARG YTYKEVASELFISIKTVETHMSSVLRKLQLSNRSELTRWAADRRIV >gi|148337405|gb|DS264454.1| GENE 507 552955 - 554454 1329 499 aa, chain - ## HITS:1 COG:Cgl0594 KEGG:ns NR:ns ## COG: Cgl0594 COG4585 # Protein_GI_number: 19551844 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 181 474 54 352 352 132 39.0 2e-30 MKSLAKPRYTQEQYDQASAVYMRWCYEQALREGRPVPSKPARLPLLRPTYGREVAGVAKA ISIHLGVSVHLIRFIFVVTTFFFGAGAIAYIFLWITVPVGDPVQQAYVIAGSQPVENAPL SHGNVRNVRNLRNVGNGGAQSQDSDGNADGMQSGSGAQSSESLEQMFANAPRPALLAMAG LLMLGLCVAMAAKGIEGTLIVPLLLGVVGVGVSWLRFNAKDGQLWTMLGGIAVIFVAYAI YIATHVRIMQSARHATFTMLVAGLALLVGVLLAIVPWIMTLVRDLGTERALKEREEERAD MTAHLHDGVLQTLALIQLHADDQQTVFSLARQQERELREWLYQERTTSDRSVNAGLKQIA AHVEDTHGKPIEVVTVGDARPSAQTDALLDATQQALVNAVTHGGEPVSVYCEAGDKLVEV FVRDHGDGFDVDAIPANRLGIRESIIGRIKRRGGTVEIVSRPGWGTEVRMHMPISGAAED ADSATTTTADGDTGVQSAQ >gi|148337405|gb|DS264454.1| GENE 508 554568 - 556481 1427 637 aa, chain + ## HITS:1 COG:no KEGG:BAD_0372 NR:ns ## KEGG: BAD_0372 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 637 31 667 667 1203 99.0 0 MSNANNNPQGGSAAGSAEPQSQPRPPMYQPQPNRGNRFFAWIRSSRITRGRNRWIAGVCD GVARRLGWNATLVRALVILTSLLFGAGAAFYALAWFLLPDETDGRILCEELVNGHWDWNC AGALVCAAVALCLPGAGWLAFGVAVLVFWLLVNRQSYAASWQPPQQGGSWPGQPAQPVQP GRPVRPAQSQYMPQPMSTNTATTANMPGTPGQPMPQPTCPAPSGYHQYARPVQSPYQTFQ QPVNPPAAFATANVPPTFTVPPTVAAPQSKRARRKPAGPLLVLVTLGLALLAIAGSGWYA ITMPVDWDYALRVLRLATLCCGGICLGIGVVIVVLGCMGRRTGGLHPLAWCAAFMAVVMT FCTSAVAWESRDWMMSNDYHRTTVSGIVTWSDTSDAQMKRYEQGLVVVGKNYANDVLDID LSGYPAVHGKHKVKLNDGTYGESSCPTGKLNLVVVNAQVVVTLPDGCQWSVSDPDDGYTN VTDYIGGPDGITFFNGTGFMGLSLDENDDSGLGHHGVNKGVPALNGTTDFDDSGDDDAGD AGSDTENDSQDSVYAGTDLDKAFKTIYENKWYWPSIDSDKAPEEPDLYVNVDGTVGGSVT MQYTSDSKLPVGTTGGQSHGSVDGKNVGKSASGKETK >gi|148337405|gb|DS264454.1| GENE 509 556478 - 557092 700 204 aa, chain + ## HITS:1 COG:no KEGG:BAD_0373 NR:ns ## KEGG: BAD_0373 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 204 1 204 204 353 100.0 2e-96 MSDEKTREVPLTDVMGIAEVSDEPTETLPAVDDPGEAKTESFQKPFDGGPEAQRKFESQD EAESLETSGQDMRGSFAGRSARPTGSVKSADPAKSAEPVDPSKQVRIGKTDGELVIRPSG PSTGTIVLGVFFCLIGLMSMLCLLPIGAWRWMPNPSTLFFYVVGGLGALLLIISVVWAVV AAVRLRRRERQSAEQSPESQQRQR >gi|148337405|gb|DS264454.1| GENE 510 557051 - 558868 1448 605 aa, chain - ## HITS:1 COG:no KEGG:BAD_0374 NR:ns ## KEGG: BAD_0374 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 605 19 623 623 1085 98.0 0 MRSIVKRILVTCAATTALALLLTMVLCALGNAMAPKWQVEPFTDHITLTTTNTAIQAVDP ATGAVLKTPQEGAYRTKETHITVALDGGKTVNAIVREPLDAPADRPACLFLHGSGTGKSS EAFGDVANAMASAGITTLVPDKRLDNYTMLHRDYVSSAHDYAKSLEILRKWPGVSRSETG IYAESEGTWIATVLTQQHPDLAFAILTSPPVVSGRQQMTLAATNYLTAAGAPDAVKQLIP RITSLGTQRMGLAYADFDAAKYRRSLTMPLLINYGVKDTAMPVEQGARLLIKAANQAGNT NVTLRYYDANHQLRTGSNQTVPGLPLEPHYTHDLEDWINAVTSGTGANGWATPMIAGTQP NQTVTAPLKTTPALVKSMGVIIGAIAVCLLCALLAMCGAPILLIAGWVRERRASRRVSHD SASTEPAEPTDSTSMFSTDATTPTGPSTQPNAARPIAITDHRFPVGMRVALALNTLLAVG TTGVFLAYLVTVIIDAISLTDNSAVLAKNWHAIVMLTWLSLVAFAWLLAEIIVDTCRRHA RNRAIASIDDDADMNNGHDAAAGSRCDIGKDGKACIGSGHVIVATCVVVSAALSLALLAF WGLFC >gi|148337405|gb|DS264454.1| GENE 511 559182 - 560336 1366 384 aa, chain - ## HITS:1 COG:araJ KEGG:ns NR:ns ## COG: araJ COG2814 # Protein_GI_number: 16128381 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 384 1 383 394 236 40.0 6e-62 MKRSILALASGAFILGAAEFVMMGILPQTATAMHVSIPAAGHYISAYAIGVCVGTLILVF GRKVPPKHLIILFMAIALVGNTLSAVSFCSPMLLVARFISGLPHGAFFGTATLIAKTLAD KGKEAQSVSMMVMGQTVANMLGVPAGTLLAEAMSWRLAFAILAAWALMTIVVVISWVPSI DPIKDAGIKGQFRFLTHPGPWLILLAVFFGNSGIFCWWSYVSPWLQKTGGWSATMVPMLM VLAGLGMVVGGIVGGRLTDLWKAGATAALSHGIALCGLLLVFLLPGNHTTTALLTFIIGF ALFFNSSPQQLLMVQAGEGGGELIAGAAVQIAFNFGNAIGSIVGGAALTATAMNYHFTGI AGAPISLLAVILLALYTRRYEARA >gi|148337405|gb|DS264454.1| GENE 512 560615 - 562294 2568 559 aa, chain + ## HITS:1 COG:Cgl2631 KEGG:ns NR:ns ## COG: Cgl2631 COG1190 # Protein_GI_number: 19553881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 64 557 16 523 526 546 56.0 1e-155 MTETNESQENQNEEEAAVPTMTTVERAEMLLQQDAAIRAKINGGAALDEAVDPSNKEFGP LAHPEQVQMRVAKRAMMLKEGIQPYPVTLDVTATIEEVRAKYDGKLEAGAETEDVVGIAG RVLFLRNAGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLFIKGRVIAS KTGELSVFATEWAIAAKALQPLPALHKDLNEDTRTRKPYIGMIADEKIRNMVRNRSKAVA SLRKTFADHDFLEVETPMLQTVHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVGGI DRVFEINRDFRNEGVDATHAPEFTMVEAYQAYGNYDTIGALVKQLVQDTAMDVFGSHKVT LLDGTEYDFGGEWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERDDV ENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRSKAGVVEKWDLYVRGFELAT GYSELNDPVVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLLIA LTGATIRETITFPLVKPLN >gi|148337405|gb|DS264454.1| GENE 513 562859 - 563743 201 294 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 1 177 51 223 298 141 44.0 1e-33 MLCAVVAVGLQIAVNYLNDYADGVRGTDARRGSDAAGPRRLVASGIDPSRVLLAAAVAAL AACSAGLVAVVITGRWWLIALGATCLLAGWGYTNGRHPYGYRGLGELAAFVFFGLVPALG TQYALSGSITVTGVAGSVICGLLSVSVMMVNNLRDLEDDAAHGKRTLMVRIGSGKGKCWC MRALGWAAGLTVVFAMPLSVYAGLLDLLIVLPAEVDRERSCTEYGICDDWSWGNADWMSL AAFVFIAGCVAIATRAVAAVRHDQWRRALPLCSVTSLVAAGAFVLNACQVGFMV >gi|148337405|gb|DS264454.1| GENE 514 563896 - 564636 976 246 aa, chain + ## HITS:1 COG:Cgl0397 KEGG:ns NR:ns ## COG: Cgl0397 COG0588 # Protein_GI_number: 19551647 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Corynebacterium glutamicum # 4 246 5 248 248 301 65.0 1e-81 MTYKLVLLRHGQSAWNKTNQFTGWVDVPLTEQGVEEAKNGGRLLKEKNVLPDIVFTSMLR RAINTANVALDEADRLWIPVKRSWRLNERHYGALQGKNKTEIRQEYGDEKFMLWRRSYAT PPPEIDPNDEYAQNNDPRYTGDPVPEAECLADVVKRVEPYFKSDIEPELKAGKTVLIAAH GNSLRAIVKMLDNLSEEEIAKVNIPTAMPLLYELDENFKPIKPRGEYLDPEAAAAGAAAV AAQGQK >gi|148337405|gb|DS264454.1| GENE 515 564863 - 566743 2351 626 aa, chain - ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 1 626 1 591 591 691 51.0 0 MYYSNGNYEAFARPKKPEGIDSKNAYIIGTGLAALSAACYLVRDAQMPGDHIHVFEKDPV PGGACDGANIPGVGYVMRGGREMDNHFEVMWDLFRSIPSIETDGVSVLDEYYWLNKEDPN YSLCRSTKARGVDGGTNGKFALSDKASMEIMKLFFTPNEELYGKKISDFFDDEVFDTNFW MYWRTMFAFENWHSALEMKLYIRRYIHHIGGLPDFSALRFTRYNQYESMILPMIKYLEGF GVQFHYNVKVENVDFAIGGGMGPVRQRTGTGQDTILRKQAEYGAYPRNPFSSPTKKLATR IDLTKADGTTRSIDLGENDLVFITNGGCVENSSMGSQTEPAAWAPEIKPGGGWDMWRRIA AQDPSFGHPDVFCSDPEHSKWMSATVTTLDDEIPPYIQKICKRDPFSGRVVTGGIVTVED SNWLMSWTLNRQQQFRDQPKDQLCVWVYGLFPDKPGNYVKKPMQDCTGEEICEEWLYHMG VPTDKIADLAKNHANTVPVMMPYIDAFFMPRSAGDRPDVVPDGAVNFAFLGQFAETPRDT IFTTEYSMRTGMEAVYTLCDVDRGVPEVWGSVYDVRNLLNATVMLRDGKPITDMKLNPIE RGVLKQIVKKLDSTDIPTLLKEYGVI >gi|148337405|gb|DS264454.1| GENE 516 566759 - 566992 73 77 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPLGTIVPRRGTQVYGHELDAMSSFYDYRRNFAYRWRIAPACESDFAYMWQISFGKGCSG AGFLPPYDVLAEVICHI >gi|148337405|gb|DS264454.1| GENE 517 567064 - 567744 839 226 aa, chain - ## HITS:1 COG:MT3400 KEGG:ns NR:ns ## COG: MT3400 COG0704 # Protein_GI_number: 15842892 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 216 1 216 221 124 34.0 2e-28 MRVIFNEELKAVADDLDRMAQDVRKAINGAGDALLNQNLEAAQAVIDGDIEIDALESSVI DQCVKLLAKQNPVATDLRVVVSTLRLAATFERMGDLARHIAEAARRTYPASPLPADAQSL FAEMQAFLDHVADQVVSMLNDRDTKTAEEIILNDDKLDALHKKTFELAQSENWSGTNQQL IDVVLIGRFMERLGDHAVSAARRVVFIVSGFDPSKEPTRDEGTDID >gi|148337405|gb|DS264454.1| GENE 518 567944 - 569116 1131 390 aa, chain + ## HITS:1 COG:ML2440 KEGG:ns NR:ns ## COG: ML2440 COG0642 # Protein_GI_number: 15828318 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 33 388 53 377 441 161 33.0 2e-39 MFESVGTWWRNLTHRHGDDRNNDDTLDDATNTLLSILPLASIVVDEHDEVIRAHPDAYAL GVVRDDAIADDTVASAVHEVRAHGGKKQFSLTTTTLHEPKKAPKAGKPTMREVAKQALIG QSPDKPVTTVSRPNWLKVIVGRLNERFVVVLVSDVSETVRFSQIRDSFITNVSEQLLKPT QSLEELADALEHDSDNKAAIEGNTVKLRQSCARMEHMVSDLLLLIKAQEPILPTASNRIN VMEQVKTVVDAHRDMAQWRGIDIEIDGDESLDINGEGEQIQAAVAKLLENAIAYSPDGKG ITVSVKPNEDGTKVLLSVLDRGCGIAQKEQSRIFERFYRGGNQNGHSEEGIGLGLAIVKH VALTHHGSASVWSAPGQGSTFTLELPVARN >gi|148337405|gb|DS264454.1| GENE 519 569237 - 569491 419 84 aa, chain - ## HITS:1 COG:no KEGG:BAD_0382 NR:ns ## KEGG: BAD_0382 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 84 1 84 84 164 100.0 1e-39 MKFAPIIDPSVRKPSPKPVRVDLRKVFTFGTALWAIALVICMILLAFGINVERLQTMCAA GTVIGVLMLVWEHFDRWDYRRLGE >gi|148337405|gb|DS264454.1| GENE 520 569518 - 570660 1630 380 aa, chain - ## HITS:1 COG:MT0907 KEGG:ns NR:ns ## COG: MT0907 COG1932 # Protein_GI_number: 15840298 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 380 5 376 376 411 55.0 1e-114 MTNTVNIPTNMLPEDGRFGSGPSKIRPEQVQALDAGARNLLGTSHRQTPVKQVVGSIREG LSNFFQIPDGYEVVLGNGGASAFWDIACASLITRKAAFGTYGSFSAKFAKSAQSAPFLED PEIFAGKPGTYRLPELTEYVDAYCWAHNETSTGVAAPVKRVEGSKEQGALTLIDATSGAG ALNVDISQTDAYYFSPQKAFGSDGGLWIAVLSPAAIDRAYGIAKSVSLPGARRWIPPFLS LTSAIENSRKDQTLNTPAVATLVMLENQVRWLNDNGGLAWATARCARSASLLYQWAERSD YAQPFVSDENARSNAVVTIDLDESINASQVVAALRENGIMDTNGYRKLGRNQLRIGVFPS VEPSDVEALTKCVDYVAEHL >gi|148337405|gb|DS264454.1| GENE 521 570867 - 571799 818 310 aa, chain + ## HITS:1 COG:SPy2025 KEGG:ns NR:ns ## COG: SPy2025 COG3942 # Protein_GI_number: 15675802 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Streptococcus pyogenes M1 GAS # 201 300 428 523 541 83 45.0 6e-16 MRHAAHKAAKVSHAQFSLSKALFTANRGSHTAKAVRMAQLAEGGAVVGLAPEVVDKLNEV APMSRRAMREAAKAASRKSALVTSASLAALVGTAATALAFSQQNASRLVLADDGTETSQI KRVSDGAASRSEGRTALKELASTSNNGGWQLGDTSASMDASLMSKSIADNPNVAVLMDQD SSALPANFNPNHATGDVGNAYEFSQCTWWVYVRRHQLGLPAGSHMGNGCQWADSARALGY WVDNTPRHVGDIIVFAAGQEGSDSYYGHVAIVEKINDDGSIVTSESGASLNGGTYSRTLT NVGDFQYIHY >gi|148337405|gb|DS264454.1| GENE 522 571862 - 572611 701 249 aa, chain + ## HITS:1 COG:CAC2663 KEGG:ns NR:ns ## COG: CAC2663 COG0791 # Protein_GI_number: 15895921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 120 249 128 255 255 90 40.0 3e-18 MKHIKHCSVIAALAAAALTFAGVAPAALAANDGATQDAVVATRSFPKTNAVKKNILAEAS STQVESDSDWGGVESLNVPQTKSQAEKDAEAAAAAAEQQRQQQAQAQAQAQAASRSAARS DLSSSGSFTVTPPDGASVSSLLTFANQFVGKVPYVSGGNTPSGWDCSGFVQYVYGQMGVS LPHYSGAQATVGRAVGSLADAQPGDIIANAQHAAIYVGNGMVINSQLNGTRYDPIAWVFP SSYSIRRIF >gi|148337405|gb|DS264454.1| GENE 523 572773 - 573807 1341 344 aa, chain + ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 1 286 1 293 301 127 34.0 4e-29 MINDKAILVGVDGSHASYKATWWAANYAKHAGLTLQIVCAYSLPSYAAVSFDATYTAMGD DNAAHNDAQEILSKAKAIADEQGVEASTLIVTGDPASVFVELSRNYNLIVIGNRGKGGLA ERLLGTTSSSLPAYAYCPIVVVPYTDDEGNLMHLNNTITKVAVGSDESKWGLKALEIAAA FADSWGAELDVISAVPNMKGSEDEGVMASFQEDLDVRIKPLEEAYPNLKINKQIVPGPAA GALTKASYDHDVVVVGSRGRGGFTGLLLGSTSQGLLQHAVGPVYVVPRKYVEAAETRLDT VPSSPADVTPKAIDDIKGVEEVPVDKAKPEVVEAIETKIDPDRQ >gi|148337405|gb|DS264454.1| GENE 524 573912 - 574325 594 137 aa, chain - ## HITS:1 COG:MT2992 KEGG:ns NR:ns ## COG: MT2992 COG1765 # Protein_GI_number: 15842468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Mycobacterium tuberculosis CDC1551 # 4 133 3 132 137 70 34.0 6e-13 MGKRLWVERNKDGSWDAFSEDGAHIKFGKGRGQFTPGDLMKVALAGCAALSSQFAVEHTL GDGKGAKIVVDGTYDADTDAYIGFDEQVVIDATDAGLSDEDAEKLADRVSRHIEKGCTVK HTYVEPTPVRMNVTVKH >gi|148337405|gb|DS264454.1| GENE 525 574582 - 575454 1038 290 aa, chain + ## HITS:1 COG:MT2834 KEGG:ns NR:ns ## COG: MT2834 COG0207 # Protein_GI_number: 15842302 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 23 290 3 266 266 393 67.0 1e-109 MALTSEQLADIRTRIPARPETDIPMPYEDLVRKILTEGTLKSDRTGTGTISLFGQQMRFN LKESFPLLTTKTVFFKGLAYELLWFLKGSTNVRWLQEHNVHIWDEWADENGDLGPVYGAQ WRSWPAPTPDDPNRTIDQISNVLDLIRNHPDSRRMVVSAWNPAEVENMALPPCHALFQFY VADGRLSCQLYQRSCDMFLGVPFNIASYSLLTLMMAQQTGLEPGEFVWTGGDCHVYDNHI DQVLEQLSRTPYPYPQIRIRKADSLFDYDYSDFEIVNYQHHPTIKAPVAV >gi|148337405|gb|DS264454.1| GENE 526 575533 - 576198 791 221 aa, chain + ## HITS:1 COG:MT2833 KEGG:ns NR:ns ## COG: MT2833 COG0262 # Protein_GI_number: 15842301 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 36 218 2 159 159 121 39.0 1e-27 MEHDSSRSGYHEPEPGLAGREDEEDWGDDFPKTFSVNLIWAQACDKEGHDGAIGFEGGMP WHLPEDMRHFTELTVSHPVIMGRKTWESLSPKFRPLPNRDNIVISHDPSYFAPGATVVDS LDDALDLARQEAIPDDGLDRSEIWVIGGAKVFEEAMPFADKAYVTQISMHVNADTYAPDI HALVESGAWRVAEEGTWQKARKGNDQVEGFRFVTYERNHEE >gi|148337405|gb|DS264454.1| GENE 527 576205 - 576708 632 167 aa, chain + ## HITS:1 COG:MT2293 KEGG:ns NR:ns ## COG: MT2293 COG0394 # Protein_GI_number: 15841726 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 4 165 7 157 163 101 38.0 8e-22 MYTVMTVCTGNICRSPMAEIILRAEFERRGLDDKVNVESSGVSDEEYGNPIDRRAVKVLK ERGYELPSHHFAHRITRDEIERTDLFLPMTASHMRALLRQLPQAKRSEVHMYRSFDPNLP KPAAGREDSIDLVDPWYGGPREFEVAIDQIEEVAPYIVDWVEQQLQN >gi|148337405|gb|DS264454.1| GENE 528 576729 - 577193 -86 154 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLDGFKRAAFVFCDVLRFFLGGGGWLCCEVAIFLMLRCLVGLNIRRFCDVAIAGCPVEAG ICVARHTQGRSAELTALQRICRPPPRFYWQVAMLLRSVGKLRFLIFVGRLVFVGKLCLDG WEAWIGVGGESEGKRKTPADWAGVWWRPRPDLNR >gi|148337405|gb|DS264454.1| GENE 529 577369 - 578379 1460 336 aa, chain - ## HITS:1 COG:all4713 KEGG:ns NR:ns ## COG: all4713 COG1087 # Protein_GI_number: 17232205 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Nostoc sp. PCC 7120 # 2 320 7 328 332 259 45.0 7e-69 MTVLVTGGCGYIGAHVVHALHQAGEKVVVVDDLSYGKPTRIEGSRLYGMDIAAPGAGERL AEIMKAEGVDSVIHFAARKQVGESVEKPLWYYQQNLNGMLNVLIGMRDSGAKKLVFSSSA ATYGVPPVDVVPEDVVPMLPINPYGQTKLFGEWMARACEEPYGIRFCGLRYFNVAGCGPV ELEDPAILNLIPMLFDRLKKGKAPAIFGDDYPTPDGTCVRDYIHVSDLADAHIAALKYLD RDERKYDAFNVGTGEGTSVRQIVDEVKKVTGLPFKETVMGRRAGDPPHLIGSPKRINEEM GWHAKYNVEDIVKSAWDAWQANPEHHIDVGTWKQTD >gi|148337405|gb|DS264454.1| GENE 530 578547 - 579431 931 294 aa, chain + ## HITS:1 COG:PM1317 KEGG:ns NR:ns ## COG: PM1317 COG0220 # Protein_GI_number: 15603182 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Pasteurella multocida # 2 291 6 252 255 138 34.0 1e-32 MQHDENTPTDGRKTEENAQNIQHVQSAAADGRPALYGRKVLSFVRRSARLDARLQRAWGT YADTYLLNINAGEGSLDVREGFVFDQAYIRETWGNTNPLIVEIGSGQGENVVAAAAARPD VNFLALEVYDPGVAHTLLLAGKQNLKNLRIAQINAPELFKAAVDGSIAEVWTFFPDPWPK MRHHKRRIVQPELAADIHRALTDEGVWRIATDIEDYALHVHEVMDELDGFHNDGALTVSL PVEHVGKGNADEAAALRHADFAESERFDGRVLTNFEKKGLAAGRVIHDFTYRRV >gi|148337405|gb|DS264454.1| GENE 531 580265 - 581416 1753 383 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 381 2 381 383 417 55.0 1e-116 MVYRMIFNQTAYFGRGAIKEIPGVARSHGFTKAFIVTDPVLLETGTVKKVTDVLDEAGMP YEVFDNVKPNPPVECIQDGVAKFAASGADFLIGLGGGSPQDTCKGIGIVTANPEFADVLS LEGVADTKNPSVPIFGVPTTAGTASETTINYVITDTANKRKFVAVDPHDIPIVAFVDPDL TDSMPRGLKVATGLDALTHAIEGYITPGAWSLSDCLSMQTIRMIAKNLAKSADGDIPAGE QMAYASYITGMAYSNVGLGLVHGMAHPLGGRLGVAHGVANGILLAPVMEYNKDYTGEKYR DIADAFGIADAYTGDIETVREEAVQAVHKLTVDLKNPTKISEVGATEADLEPLAHDAFHD VCTPGNPRQATQEDILAIYKSLM >gi|148337405|gb|DS264454.1| GENE 532 581548 - 582474 912 308 aa, chain - ## HITS:1 COG:Cgl0614 KEGG:ns NR:ns ## COG: Cgl0614 COG0463 # Protein_GI_number: 19551864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 4 239 9 243 251 90 30.0 3e-18 MLNVSIVIPAWNEQERINDCLLNATRQTVMPHEVIVVDNRSTDSTVAVVEQFMKDHPEAP VKLLHQDDEQGLIPTRDYGLNHATGDILGRFDADCMIRPDWVEVVSGIFTEDPDAMGATG PVMYYDLPSRHFGLRGDNSTRKRIYRADDGQPLLFGSNMALRATAWREIADEVCQDKADV MHEDIDISLHLLGKDLKTVYCPRMIAGISARRMDTSPASFLNYMRRFKNTFNAHPQHYRK HKPEILITALYPVMHLLYPVWQKVLNTADINPAEAAWINEQMELAEQEGHELYDDTPTDE EWSEKHEE >gi|148337405|gb|DS264454.1| GENE 533 582529 - 584052 1615 507 aa, chain + ## HITS:1 COG:Cgl2741 KEGG:ns NR:ns ## COG: Cgl2741 COG0628 # Protein_GI_number: 19553991 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 42 400 80 437 476 95 25.0 2e-19 MSEREQHMDTDKRTGTSGQCGNTDEMRWDLGTLFPAKGDPRRPPEWLGRALLYIAIAIVL LSFCWRSWGKIEYLIIDVVISLFLALAVEPVVIPLVKHGWKRSFASIFALLMLGVLLCVM FGLFGNLFVQQVIALCNGLPALYQQICDFVAQYTDFKLPEINSLGGEILKNIQTSWVTDF AGTAISTVSGFFSFLLNLMTVIMTTFYISAAGPKLRRAACQWMAPSAQRRFLFVWTVSQT QISSFLFSRAILAVLNAFFTSICLMALHVPYWMPLALFCGVVSQFIPMLGTYIGGALPVL FAWGSCGLWQAIAVVAFICVYQQIENLIFAPKISRRTMDVNDAVAFLAVLAFGSLFGAIG AFLALPIVASIQTIARTYTKRYDLVDSPLMDDPVPDKKSKLVEGAEVISEHLHAVPRAVQ GSSAHVPIPDDVRFLQEQAYNITRSDETGDADESQTVAIPKHVLDGVDRKPLRGTAEADG AQTEAGPQVADGSQSQGTDDNPRSRWR >gi|148337405|gb|DS264454.1| GENE 534 584052 - 585275 1709 407 aa, chain + ## HITS:1 COG:CAC1691 KEGG:ns NR:ns ## COG: CAC1691 COG1215 # Protein_GI_number: 15894968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 44 405 47 412 425 226 35.0 6e-59 MVLLSVLDVVLVVLGGAGMLYQAVCIVISLFAKPIKFPEAPMNKRYAVLISARNEANVIG NLIDCLHSQTYPSELIDIWLVADNCTDNTAEVARNMGCHVIERFNKEQVGKGYALTYLLD QMNESGASDPYDAFFVFDADNKLDKHYIEEMNKGFQAGFKILTSYRNSVNLSDNWVSSGS ALWFIRESRFVSASRMWLGNSCHVGGTGFMFSQEIMRRNNGWKFHLLTEDLEFTMDSVLH GDRIGYCGTAILYDEQPVTFAQSWRQRLRWSKGFLQVFRYYGPALIKRAVRERDFSAVDF TLLLCPFTVLGIARVLLGMLFAACGFVTWQSQLNSLTGWTSGIVISVIGMMGLAALTIVA ERDHVGATNKELLAYVLAFPIYMLSYVPISFQAVFAKSEWKPIEHKG >gi|148337405|gb|DS264454.1| GENE 535 585374 - 586819 1523 481 aa, chain + ## HITS:1 COG:ML0211 KEGG:ns NR:ns ## COG: ML0211 COG2027 # Protein_GI_number: 15827014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium leprae # 92 466 84 446 461 87 31.0 4e-17 MDDAGDYRYARRRRAITVAVSVVATVALCVGYAVADMCDVAPGVLTLRHVEHSTAAAAGR SIEAADVVADIDASKTIDPAAARALTDAFRASAAGFGGEFSIAIADASGNVVAENNIDVP RTPASTMKTLTAYAAAVELDMGKTLDTQTYLEQSQDGTARLVLKGNGDMLLGAGASDANH INGRAGLGTLAGRTAQALRQRGITSVTLAYDDTLFDNDRWPQGIAELDTDHLYYAPTASM AVDGGRNWNGTGPANPDVFSAYPALSMQPARDAALVFQQRLAEQGITVQGFVSQGTVAGA SHPLASVRSASLNEIMAFTMRHSDNSLAEEFGRLLALQVGTDNSPAGAVQAVKSVLERKG ITTTGLDMRNCSGLTEDSKLTARTLLEVQLRNLAAGSGAAAAEGMSVMGFVGTAESRLND ADEAGLIRVKTGSLGDVTSMTGNVSRLNGGALTFAVIVNNPTDFAAAKAAIDTFVAGLPK L >gi|148337405|gb|DS264454.1| GENE 536 586900 - 587463 569 187 aa, chain + ## HITS:1 COG:SP0012 KEGG:ns NR:ns ## COG: SP0012 COG0634 # Protein_GI_number: 15899961 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 6 182 2 178 180 171 49.0 5e-43 MRIADVQEDIDHELISKEEISDIINRAAAQASEDYRGKNPLLVCVLKGAVNTLAAFSQAM SIPVQMDFMSLSSYGSGTESSGKITVRQDLSTDVRGRHVLIVEDIIDSGITLAWLVDELK RRRAASVEIFALLEKPARRKVNVDVKYKGREIPDEFVVGFGLDYDEYYRNLDSIAVLKPS VYEGGQA >gi|148337405|gb|DS264454.1| GENE 537 587460 - 589559 1181 699 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 165 655 98 590 636 459 51 1e-127 MSFPGPNQPPSNGGGNKPNGGNNPFTNPFSRNNDGKNGGSGANGNKSNGPRPFWQSQWLW VVVVALLAVTMFQLFAGAGSQTIDTKDGMQILNGNTVEYATIVDNTQQVKLKLSSDYSAT DPDTGRTKNYGKNVQFYYTYAQSAAVVKAVQKADPAKGWTASMQQTSIWTYLLTSLLPFL IIFGLFWFLMSRMGGAAGGMFGMGGKKNSGKLLDGQTPTTKFSDVAGEDAAVQEVEEIKD FLKDPSRYKALGARIPRGVLLYGPPGTGKTLLARAIAGEAGVPFYSMAGSDFVEMFVGLG ASRVRDLFDEAKKNAPAIIFIDEIDAVGRKRGGSGMSGGHDEHEQTLNQLLVEMDGFDND TNLIIIAATNRPDVLDPALLRPGRFDRQVAVEAPDLEGREAILKVHAKGKPFVPDVDLHM IAVRTPGFTGADLANVLNEAALLCARAGAQLIDNRAIDEAIDRVQAGPKRRSKGMALDEL RNTAYHEGGHALVAAAMNDTDPVTKVTILPRGRALGYTAVMPTEDRYSMSRNQLLDQMAY AMGGRTAEEVVFHDPTTGASNDIEKATNIARQMVLDYGFSEKLGAIKWSDDEQSDLGALT HKYSARTAEIIDEEVLKLVETAHTEAWNVINENRDILDELVRQLLVKETLNEKELAAIFA NIKKAPKREVWLSDEKRPDSDIPPVPIPDKLKKSAGLTN >gi|148337405|gb|DS264454.1| GENE 538 589559 - 590194 705 211 aa, chain + ## HITS:1 COG:MT3713 KEGG:ns NR:ns ## COG: MT3713 COG0302 # Protein_GI_number: 15843221 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium tuberculosis CDC1551 # 25 207 16 200 202 219 60.0 4e-57 MSDTDFDTLFDDKARAAHAAGPVGYDEEGVRQAVRLFLKSIGEDPEREGLLDTPDRIGRA CKELFAGLGHGPEEVLKTRFKVDTDEMVLVRDIELFSVCEHHLLPFHGVAHVGYIPQNGQ VAGLSKLARLVELYARRPQVQERLTQQVADALMEGIDARGVIVVTECDHMCMAMRGVKKA QSRTVTSAVRGCMRDAATRTEAMSLILSNHS >gi|148337405|gb|DS264454.1| GENE 539 590263 - 591141 1283 292 aa, chain + ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 16 286 8 270 284 201 48.0 2e-51 MAIDMKAIHDSQRTLVMGVLNITEDSFSDGGLWLAPEAAKAHGEAMMKAGADIIDIGAES TRPGAKRVSEADEKARVLGAVDALIPEGAVLSIDTTRASVALAALEHGAQIINDVSGGQL DRELPHVVADHSDCLYIVQHWRGWLAGAAGNVPDADTSRYEHGVVNDVYDELMRQVDAVL EAGVQAEQVIIDPGLGFSKPGVEHNLPILAALDRFNAAGYPVLIGASRKRFVGSLLAGAG VTEPDMASKDNATAAISALCAEHGVWAVRVHDVAKSRDAVAVGNAWREYANA >gi|148337405|gb|DS264454.1| GENE 540 591226 - 592776 1280 516 aa, chain + ## HITS:1 COG:SPy1100 KEGG:ns NR:ns ## COG: SPy1100 COG0801 # Protein_GI_number: 15675083 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Streptococcus pyogenes M1 GAS # 140 276 6 141 166 108 44.0 3e-23 MDQIRLTGIRATGKHGVLDFEHERAQTFVVDATLFLDLAAAGRSDDLNDTVDYGAIAKGI VAIIEGEHVDLIEKLANRIVGMILGFPAVCRTQVTVHKPNAPITVPFDDVSVTVERSRET VDSPSRERSSEHGQVHHAIIAMGGNQGDVTATLRDAVRCIDGLPSTQVTGVSPLYRTDAW GMPEGTAEFRNAVVSVDTRLSAAELLAGLQRIEASHGRVRTDHWTSRTLDLDIIDFDGQE SADPDLTLPHPRAWQRAFVLGPWLALEPDAELGGAHAGSVAQLLHETSDRDHIDEIADDW MVAGAQDSIVRDSDIGTSADDVDAIDDADSVESIDSIEFPEGTAASKAAAAAAAKPGPAS RRAVISLDSVSTDAEHQFRQAIVAIDALPGNQVEGISPLYHVSQVDDYPDKMAAVMQIST RMDARELIGALESVSSSISDDLDLDLVDMEGVVRNEPDCMVPWPSAREHAAVLAPWFDMD PDAKLGRDPVAFLLAMAPDAAQVGMLTDNWIIGDTL >gi|148337405|gb|DS264454.1| GENE 541 592773 - 593348 614 191 aa, chain + ## HITS:1 COG:no KEGG:BDP_0553 NR:ns ## KEGG: BDP_0553 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 178 1 178 184 260 78.0 2e-68 MRARRTPWWSFVLAAALGVLAGMGLAKYGEISGLPLVGAPWIVPVVLAVLGGVVLYMALQ IHKYTTKDPVKRAQLKPLDPQKAFGTLVACKALGLAGAALAGWYGGQIIMSLPHGEAEFY SQAIIECVVACVVCVADMIVGIVGEWLCRIPPIDGPESPAVKKAAQRNRYAAAATKASTK SATNPATKSKV >gi|148337405|gb|DS264454.1| GENE 542 593374 - 594339 1010 321 aa, chain - ## HITS:1 COG:BMEI0166 KEGG:ns NR:ns ## COG: BMEI0166 COG1946 # Protein_GI_number: 17986450 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Brucella melitensis # 61 321 43 299 300 178 38.0 1e-44 MDRLDASIKSYPHAEGIEAIMTQTDMTPLQRLAKVLQLGTPSNYRNHTYINGESLYFPTG RVYGGQVIAQSLMAASRTVAPSRLPNSIHGYFISAGDIRQDLLFDVENLRDGRSFSARRV NVTQAQGSILTAIASFQEHDQEGIEFADPMPENIPDPDSLTSAKQLMEPYAEQSPFAKYY AEKSPFDIRHVTRTIMLGADKKSASEDSGKQMVWMKADGKVDVPQVMHRAMLAMGCDQIM LEPILRRAGLSIATPGISYASIDHSMWWYRDIDINQWHLYVQDTPTAAHGRGLGQAKVYT QDGELVACMAQEAMFRVPKKD >gi|148337405|gb|DS264454.1| GENE 543 594503 - 596179 2541 558 aa, chain - ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 558 1 557 558 802 72.0 0 MAEFIYQMIKARKAYGDRVILDDVTLSFLPGAKIGVVGPNGMGKSTLLKIMAGLDTVSNG EAYLTPGFTVGILQQEPPLDDTKTVGENIKMAFGPIAEKVARFNQIGEEMANPDADFDAL MEEMGKLQNDIDAANGWDLDSQLEQAMDALQCPDPDTPVSVCSGGERRRVALCKLLLEAP DLLLLDEPTNHLDAESILWLEQFLHQYKGAVIAVTHDRYFMDNVAEWICEVDRGHLYPYK GNYSTYLETKAKRMEIQGAKDAKLAKRLKSELDWVRSSPKARQAKNKARLERYDQMEQEA RNNKKLDFSEIQIPAGPRLGSTVLEAEHIHKAFGDRVLIDDLSFTLPRNGIVGVIGPNGV GKSTLFKTIVGLEPLTSGSLKIGDTVKISYVDQNRAGLDPNKNLWEAVSDGLDFIEVAGV EVPTRAYVASFGFKGSDQQKLVGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL ESLENALLAFPGCAVVISHDRWFLDRVATHILAWEGTDENPANWYWFEGNFQAYQENRIA RLGEDAARPHRLHRKLTR >gi|148337405|gb|DS264454.1| GENE 544 596511 - 596738 164 75 aa, chain + ## HITS:1 COG:TM1009 KEGG:ns NR:ns ## COG: TM1009 COG0656 # Protein_GI_number: 15643767 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Thermotoga maritima # 1 61 218 278 286 73 52.0 7e-14 MILRWLVQRNIVALPKSTHRERMEQNIDVFDFTLSDEEMAAVTALDTKTSLFFRHDTPEA VDMFVGFIKERAGRE >gi|148337405|gb|DS264454.1| GENE 545 596894 - 597319 553 141 aa, chain - ## HITS:1 COG:SP1549 KEGG:ns NR:ns ## COG: SP1549 COG0242 # Protein_GI_number: 15901392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 141 1 136 136 135 50.0 2e-32 MQREIMTSIPFLSQPSAAAENTEEDLAVAQDLKDTLDAHRNGCVGMAANMIGVPKRIIAF VDEDFGGRIFVMFNPHITAEDGAFDTAEGCLSLQGERRTVRYQRIEVDYMDRKFRERHAA FTGFTAQIIQHEIDHCDGVII >gi|148337405|gb|DS264454.1| GENE 546 597309 - 597623 65 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVSGGENLATGYHHRAYQRIRVHPSRTLAGQFKSLRHIFAVLQHVFHDPKHIAPVQAAHV VPHIPKPTRTVREWTGSPSRPSRSHATLQYWQTGNIQREESHAA >gi|148337405|gb|DS264454.1| GENE 547 597471 - 598280 708 269 aa, chain + ## HITS:1 COG:FN1506_1 KEGG:ns NR:ns ## COG: FN1506_1 COG0117 # Protein_GI_number: 19704838 # Func_class: H Coenzyme transport and metabolism # Function: Pyrimidine deaminase # Organism: Fusobacterium nucleatum # 13 153 8 145 146 149 51.0 6e-36 MLGVMEDMLQYREYMAQALELARKGAGWVDPNPLVGAVVVSGGEVLATGYHDRYRGPHAE RMAFDYADAHGIDLTGATVIDTLEPCCHVGSQPACTDLILAHGIARVVVGSVDPNPIVAG KGLRILEEAGVEVVRDVMREECDAINRHFFHYITTGKPYIVDGRRRAGESDSEYAVRRRE LYATYAAVLAGTESDVPDESFAHFNGPVQAVGADEVVIGGHRPLLLEAGALACTDPDEWL SELGKRKIDGLIVESDEAFERLSMACQKD >gi|148337405|gb|DS264454.1| GENE 548 598488 - 599996 1181 502 aa, chain - ## HITS:1 COG:DR2540 KEGG:ns NR:ns ## COG: DR2540 COG1574 # Protein_GI_number: 15807524 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Deinococcus radiodurans # 46 419 55 432 496 134 33.0 4e-31 MGEPYVIENVCFVGSDESVDITIEQGRIADVRSSEKSVDKASKTWVIPGLWDCHTHFTQW SYTLGRLDLIDARSADEAMSLLREHLEERRESGTLDPDQYVVGMRFRHSLWADDAQPTLA AIDAVSGDQPVALSSADMHCGWVNSAAARKLGVHVGESGLVGELEWFDAYCKLDKGPGAA DELMRLLRNAEQDAAGKGVVGVRDYEMAENIDTWIDRFKQGLDGLRIEAGVYPERLQQAI DDGWHTGDELPGSHGLGHVGAMKMISDGSLNTRSAYCSTPYSGITPETYGTLSYTPEQIE SYMRLATEHGFDIACHAIGDEANTIVLDCAERTHAHGSIEHAQMLKERDIPRLAQLGLAA SIQPQHAMDDRDVITRFWGNPAGIPYAFNSLHRAGIKLLMGSDAPVAPLDPWLAISAAVF GTESSDREPFQSEQCLDFETALASSTALGRTTLQAGDAADLVLLDCDPSALESPEAMRAM PDHVLATMLAGCWTYQSHVSRL >gi|148337405|gb|DS264454.1| GENE 549 600783 - 601139 117 118 aa, chain + ## HITS:1 COG:no KEGG:BAD_0420 NR:ns ## KEGG: BAD_0420 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 3 118 193 308 308 228 99.0 5e-59 MRYGLPCPEVNYAIRLKGYSHVFFADMAYPDLKIIIEYDGRHHASRWLADSKRREALEDE GWLYIQVTAENLRDEDSQRELAERVAQRVSLRLGEPVRLCGRMTIAQIADGRRKGNRL >gi|148337405|gb|DS264454.1| GENE 550 601365 - 602645 1625 426 aa, chain - ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 7 426 5 422 422 484 53.0 1e-136 MSENVDTICVQGGYQPGNGESRTPPIIQATTFKYQSSEQMSRLFDLSESGYFYTRLQNPT NDTVAAKICELEGGAAAMLTSSGQAANFFALFNICNNGDHIVASSAIYGGTFNLINVTMR KMGVECTFVSPDCTEEELEAAFQPNTKAVFGESISNPALIVLDFEKFANAAHRHGVPLIV DNTFPTPINCRPFQYGVDIVTHATTKYMDGHGSCVGGAIVDSGNFDWMAHAEKFPGLTTP DDSYHGVTYAKEFGKAAYITKATAQLMRDFGSTPAPINSWIMGMHLESLGVRMERHCANA LAVAKWLDADPRVSWVSFPGLETDKYHALAEKYMPNGTCGVISFGVPGGREKVSAFLDHL KMVSIATHVADARSCTLYPAGTTHRQLTEEQLEEAGVGIDLVRLSCGIENTADIIADLDQ ALAAVQ >gi|148337405|gb|DS264454.1| GENE 551 602771 - 602956 132 61 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MESKTLLRPLFATDVRNLIDIPQTHGMLLCLVYLRKALFRSGLFARLGLHNKLNYLSLSI R >gi|148337405|gb|DS264454.1| GENE 552 602882 - 604228 2062 448 aa, chain + ## HITS:1 COG:BH2757 KEGG:ns NR:ns ## COG: BH2757 COG2115 # Protein_GI_number: 15615320 # Func_class: G Carbohydrate transport and metabolism # Function: Xylose isomerase # Organism: Bacillus halodurans # 5 442 6 435 440 483 56.0 1e-136 MGLWDIDKIPYVGREKGPQEGLAFHYYDADKVVAGKKMKDWLRFGVAWWHTFDQQLVDPF GTGTAQRPWYGKYSDPEDEALAKVDYAFEFFQKLGVEYFCFHDRDIAPEGDTLRETDKNL DKVVDKIEENMKSTGIKLLWNTSSLFTNPRFVSGASTSPFADIYAYAGGQLKHSLEIAKR LGAENYVFWGGREGYENLWNTQMKREQAHMAKFFHMCHEYAQEIGLDAQFLIEPKAKEPT MHQYDFDASTAIAFLKTYDIDFMKLNLEGNHANLAGHTYQHEIRTAREAGVLGSLDANQG DKLIGWDMDEFPTDLYETSTVMWEVLAEGQIGPHGGLNFDAKPRRTSFTAEDLFRSHIAG MDSFAAGLLVAAKMHEDKVIENLQAERYSSFDSGIGATVENGTASLASLEEYALDIPQSK LIEATKSDHLESVKATINNYMIDALAEA >gi|148337405|gb|DS264454.1| GENE 553 604375 - 604638 90 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVIVVVISTPHSGTFGYITSLRIIEIFAWSSNANKPLTDDLAGKRLACEGNLRKEEGKKS EWCAGTPTLRHTTSGSVTVEPHCLIQR >gi|148337405|gb|DS264454.1| GENE 554 604619 - 606316 1014 565 aa, chain + ## HITS:1 COG:CC2802 KEGG:ns NR:ns ## COG: CC2802 COG3507 # Protein_GI_number: 16127034 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Caulobacter vibrioides # 9 565 37 543 548 123 26.0 1e-27 MTTTITIANPILHGMHPDPSWIWDDDLRQIVLVTSTFELVPGLPIYVSRDMAHWKHVSDA IDEELARRLLIPFVDDSGGVYAPTLRRIRGKYVIACTIARINGRKAIAEGCSQAELDAAQ AAEGNFVLESDSIDGPWRGPFWIEGAEGIDPDIFEDEDGNVYWTQTRPAVNPQWEGQTEV WTQRINPETWTFVDDGLPAGSGKTVIWRGYGMESVWAEAPHLYRVGDYVYLMTAEGGTSF EHSEMAMRIYAPHGLLRAFEAYEREVSELGECIPQVRDGERCYLGTAIRAFHADKKNPIL THRHLGLSEPLQCVGHADLLLHPELGWWLVCLGVRETRGKHDGELLSYLGRESFVAPVSW EHNPADWKLDGNGASYTHEGDPGWPVTCAGLGRLADEITVTTEDDGIAIEPRMKSSLAGD VEPALVDVADGSTNDVVVRDERDVSYRRIAKLPTLMPIPMSGSLVIRQNSTHYAVFSMHG TDVRYETVNGDDSQAGSVAALRADGTRPAVLFDDNRLSVIVTGMHGLVDSATFVRQGQVL LSVDARFLSTEWAGGFVGCMAGFMA >gi|148337405|gb|DS264454.1| GENE 555 606449 - 607468 703 339 aa, chain - ## HITS:1 COG:VCA0132 KEGG:ns NR:ns ## COG: VCA0132 COG1609 # Protein_GI_number: 15600903 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 12 337 4 333 334 187 37.0 2e-47 MRNTAKKATVRLSDIAKETGYSLSTVSKALNGRADVSEETRQTINAVLKRYGYSRKATST KSQRIIEIVFQDFDNVWALEVLRGAIREAKLHDLNVITTEGGNRQHPDSSWIDNMLRRQT DGAILVFSSLTRIERNKLHSRGIPFVLFDPFGNPDPDTLSVQADNWTGGVIATRHLLALG HTRIGIITGPEEMMCSKARLDGYTSALAEHGIETDPELITEGDFTTSGGYAQSISLLKQP NRPTAIFAGSDLQAMGVYEAARQLGLRIPEDLSVVGFDDVQTAAFLGPALTTVRQPLQDM ARAAVRMLVEALSTDDVIQPHIIMPTSLVVRNSTQQLEG >gi|148337405|gb|DS264454.1| GENE 556 607425 - 607574 81 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSESRTVAFFAVLRMSHSFFIFIISENANESFGLRFSKLSICWQYLKTL >gi|148337405|gb|DS264454.1| GENE 557 607826 - 609100 1635 424 aa, chain + ## HITS:1 COG:SMc02471 KEGG:ns NR:ns ## COG: SMc02471 COG1653 # Protein_GI_number: 15966817 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 12 420 17 430 434 173 30.0 5e-43 MKFKTIAAATLAVATMLGMGACGPSTGAKDDKTITFWHNATAGDGKQYWEDMAKAFEKKT GVKVQIQAIQNEDFEGKLTTAMQDPASGPDVYMTLGGAKTKDMIDAGQTMDLTDKISDTV KKQMSSALESMSYDGKVYGVPVTVQPGGIWYSKDLFKQAGIDAAPTTFSELKTDVQKLRS AGIDPIALGGKDAWPVGHWYYWLSMRECSPKAYAKGVNDKDFSDSCWTKAGDDLKDLLDA NAFNEGFLTTTAQQGASSSAGLLANHKAAMELMGTWEPGVLKDLTPDKKPMADLGFFAFP TVDGGKGEEGALMGAVTGFAVNPEAPDAAVDFVNFMAEKSNQEKYATAFSTIPASDEAYD AVTDENLKAIIEAMKKSDGMQLWMDTALGGNIGNALNSGVVNLLSGQGTSADIVKAMKDA AAKG >gi|148337405|gb|DS264454.1| GENE 558 609201 - 610244 1315 347 aa, chain + ## HITS:1 COG:SMc02472 KEGG:ns NR:ns ## COG: SMc02472 COG1175 # Protein_GI_number: 15966816 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Sinorhizobium meliloti # 44 312 48 312 312 179 37.0 8e-45 MSSTSKDAVTLRAKRSKKPSDGKMRRNVEIFVLSAPAILLFVCFVILPIVLGAYYGFYQW KGYGLPSKTGKFVGLQNYITALKDPAFQAAILHTFEVVIGSLVIQAPLAILFALLLNQKF KGRGLIRTLIFVPYVVSEVIVGTGWSLLLQKKGAINEILANFGINGPDWLADPKIAIWTL LLLISWKYVGFAVILMLAGMQSIPEELYEAAKVDGASFWQMQKSITLPLLAPTLRIWVFL SMIGSLQLFDLVYIVWGKYVSTTAGVSTMATYMVREGRGAGNYGYGSAVALIIFVISLII ALVYQKFVLNRDLDGAVTEQKEAEKRARKRAKEVQHREVAALASEVK >gi|148337405|gb|DS264454.1| GENE 559 610244 - 611137 829 297 aa, chain + ## HITS:1 COG:AGl3158 KEGG:ns NR:ns ## COG: AGl3158 COG0395 # Protein_GI_number: 15891695 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 296 7 281 282 197 39.0 2e-50 MTAATIAGHSNKSEYSKKNGYRKSSKTPWGNPIVYFFSLVLVAICITPVLYIIFGGFRTN SQITNHPSGMPNPWVPDNYKTVFESDIFWTELKNSTIVGIATMVGVVVLSIMVSFVIARY KFRYAPLMYALFSAGLMFPMTVGITPLYLLIRNLGLANSLWGLILPQIAFGLPQTIIILV PFLQSIPNELEEACLLDGCSRLGFFWRMVIPLSMPGVATTGILTFVGSWNAYMLPLFVLS DANKYTLPLGVQMFSSEHSVDTAQVLAFTSLAMIPALICFTIFQKKIVGGLTGAVKG >gi|148337405|gb|DS264454.1| GENE 560 611214 - 612845 1833 543 aa, chain + ## HITS:1 COG:L0234 KEGG:ns NR:ns ## COG: L0234 COG3507 # Protein_GI_number: 15673487 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-xylosidase # Organism: Lactococcus lactis # 3 541 4 541 559 791 71.0 0 MKISNPVLTGFHADPSMIRVGDTYYIANSTFEWFPGVRLHESKDLVHWNILPSPLSRSSQ LDMRGNPSSGGIWAPDLSYADNKFWLIYTDVKVVNGAFKDCTNYLVTAEDIHGPWSEPVR INGVGFDASLFHDDDGRKYLVQQTWDFREYHHQFDGITLTEFDVDTMKLKPETARTIWDG TSVKITEGPHLYKKDGWYYLFAAEGGTVYEHQESVARSRTLDEYSFEVMPNGPFIGNFDT PDTYLQKQGHGALVDTPSGEWYYASLCGRPWRHDTEPAHGTRGWCTLGRETSIQKVEWDE DGWPRVVGGHGGQRYVDAPKDAIETVAPATRDEHDEFDSGELGPNWNTLRVPFTDAMGTV GGGKLALRGQGSLCNLFDLSLVARRWQAFDFDAETKVCFSPKNYMQMAGLTNYYDDLCWS WAFVTWDEKRHARVIEVAQNDFNQYTSFLKDDAIVVPEEAEAVWLRTKVRTEYYSYEYSF DGEHFTEIPVRLDAKILSDDYVNQRYGGFFTGAFVGLACVDLSGYDAKAEFDYFDYRELP DNR >gi|148337405|gb|DS264454.1| GENE 561 612936 - 614882 1313 648 aa, chain + ## HITS:1 COG:no KEGG:BAD_0429 NR:ns ## KEGG: BAD_0429 # Name: not_defined # Def: putative secreted protein # Organism: B.adolescentis # Pathway: not_defined # 1 648 12 659 659 1205 92.0 0 MTLRLPKLLDDGCVLQAGVDMHIWGTGDPGRIVLTRLADERHMVQVKDDGTWNAPYGPIE AGGPYELTICYEDGAERISRQCYAGEVFLCSGQSNMELPMAWVRADYPQEWDRDPDPLLR QYKVIPDYDFKGPRDDHDRAFWQGCDADTLDDFSALAYFFGRRIRQWLGVPVGLLNISLG GSPIESWMDIDTLRAFPEALASLEPYLGDGVASKRSLDSVAERDRWYQALGYEAVADAHH EWLPLIAWDCPESKNIEPRDVAWHDIRLPGWYKDRGLAGFRGEITMRKTVFLPPSDAGKP ALLRLGTMNDADHTWVNGVLVGGRSNVYEPRDYPVAAGVLRAGANEIRMRLVVERPGGRV TPGKRMTLTIGDDIFDLSGIWQYAVTAEADRDCPFEDFVRWKPTGLYNAMLAPCFPYAVR AVLWYQGESNTGDYAMRYGDELKAMIELWRGKWHQPDMPFLIVQLPKFGIDAIEDGGWPL IREQEWRVADELEHVAAVVTLDAGESNDLHPHDKKTIADRAFNVAMDFVYGQQAQPQPVV ETAEADDGLLRMHCVWRNSMGEQMQSQNRHLMTLDGDVPREIDFLWHDCATSVRAEAWLD GCDIVARIPSRMPDEVRYAWSNSPESGLICDGDGVLLPPFHLPLPMVD >gi|148337405|gb|DS264454.1| GENE 562 615936 - 616172 60 78 aa, chain + ## HITS:1 COG:no KEGG:BAD_0430 NR:ns ## KEGG: BAD_0430 # Name: not_defined # Def: putative esterase # Organism: B.adolescentis # Pathway: not_defined # 1 43 338 380 466 95 100.0 4e-19 MVPGPDGTPYPEGECGNLDMIDAWVSGGGSEPYRYRFDVDMPGMMPVRFIRPIYGFRSER SLRAGGRFEAGITICPMR >gi|148337405|gb|DS264454.1| GENE 563 616372 - 617016 822 214 aa, chain + ## HITS:1 COG:L1734467 KEGG:ns NR:ns ## COG: L1734467 COG0110 # Protein_GI_number: 15673662 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 19 204 5 189 203 142 39.0 3e-34 MKETDMTQETESLIASDEDLTKLFAGKPTQYRKSKSLPKFTGEAMRACAKINRIFFDDPD EAYRLFHELVPDAGEGVQFTPPFNVDYGIGLTIGRGTFLNKDFMVCGGGYVTLGEDCLIG PRCTIATPNHAKDAATRLAGWEHASAVTIGDNVWFGANVTVTPGVTIGSNSIIGAGSVVT RDIPENVIAVGNPAHVIREIPEHDPAFADVEGLL >gi|148337405|gb|DS264454.1| GENE 564 617219 - 618739 1947 506 aa, chain - ## HITS:1 COG:Cgl0113 KEGG:ns NR:ns ## COG: Cgl0113 COG1070 # Protein_GI_number: 19551363 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Corynebacterium glutamicum # 5 481 3 429 460 350 45.0 3e-96 MARTLVAGVDTSTQSCKVRVTDAETGELVRFGQAKHPNGTSVDPSYWWSAFQEAAEQAGG LDDVSALAVGGQQHGMVILDKQGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQNGEPED PIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPENAKKIAAICLPHDWLSWRIAGYGPV AEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLEAAEGAEAAQSHAEAIVLPT VLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLGMAVGDVSISLGTSGVAAA ISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAALGVDYDELAKLAFASKPG ANGITLVPYFDGERTPNRPNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELIRSL GASITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVAIGAARQAAWVLSGETEPPA WQLTIDGVETGEPTEAVYEAYAKARG >gi|148337405|gb|DS264454.1| GENE 565 618909 - 620141 195 410 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 150 396 67 319 319 79 25 3e-13 MASLRRINQDDLRNHNLSVVIDTLLRASGPMSRADLAKETGLTKATMSLLVSLLIDAGVV KEGEPQNSASYGRPSTPLMLGGGKVCGIGMQVNTDGYGCMALDINHDILRHEWVDADMSG VEPDVVFGKLDAMAKAMAEDLESKRCIIAGVSCALPGLVTSDKRLLMARNLGWENVDLTT FDVMRGYDVTPCNEAKLAAIAQIPGYACARADVFDGVDCADSFLYLSCDIGIGGAIVRDG EIVSGSHGFAGEIGHVSVSLDGPLCGCGRRGCLETYAGRRALVEASGVAEKNAASSGEAL ERLLDAWHSHDVRTVEAVGRAIDALASAIGSALNLADVDTVLLGGWWTDFGPFFYETLEN RLESQVLGASDMQVSVSIPLVADHPALYGAAEVGLRKFIDNPLTFITDKA >gi|148337405|gb|DS264454.1| GENE 566 620163 - 620810 741 215 aa, chain - ## HITS:1 COG:no KEGG:BDP_2157 NR:ns ## KEGG: BDP_2157 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 210 1 212 220 182 48.0 6e-45 MRFNINAPFWRFMDTLLRFVGLNLVYLITLIPNVTIGPARAALYSTMFAYDEHDDIRLVK EYLTRFKREFKQGLAAWVLVAILAAAILFGLSFWKAWDTNTSYIPLILLVIAAVVVALFA EYVAPLQARFANTTGRLFSLSAMFPWRAFPCSLVLVVIDVLAAGLSYFVPFIRVLAILFG IAWVAYAKSLILLWGFKRYGGTGKVENPQYVNAHE >gi|148337405|gb|DS264454.1| GENE 567 620994 - 621365 576 123 aa, chain + ## HITS:1 COG:BH1912 KEGG:ns NR:ns ## COG: BH1912 COG0395 # Protein_GI_number: 15614475 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 1 122 173 296 297 105 46.0 2e-23 MDGAGTLTVFTRIILPMCTPILATVGIFSAVNQWNSFQDTLIYMTDSKLYSLQYLLYTYI NQASALANAAKANSANVAALASAATPTSIRMTVSVIVVLPIMFTYPFFQRFFVKGMMLGA VKG >gi|148337405|gb|DS264454.1| GENE 568 621556 - 623184 2491 542 aa, chain + ## HITS:1 COG:no KEGG:BDP_2154 NR:ns ## KEGG: BDP_2154 # Name: not_defined # Def: extracellular solute-binding protein # Organism: B.dentium # Pathway: not_defined # 1 540 41 580 595 519 52.0 1e-145 MTVEVFDSLASSQGLQKSGWFAKIVKDKFNIKLNIIAPNVSGGDTVFDTRSASGNLGDLV IVGTGNGRLNKLVKAKLIEDMTPYYSSMKNVKKYDSAVKSIAKQAGKDGVWGVPQGVSSQ SPTDPSEGNESAAAPYIRWDIYKEIGYPQIKDLDGLLNVLKQMQDRARQDTGKDDIYAMS LFKDRDGDVMQNAASICSWFGYTNQGSVFISADGKDVQPATKEGGIYQQALEFLNKAESM GLVDPDSTTQDWDTMRTKVTNGKTMLSIWSWLGKPRMNSDENKAKGVGFMLAPLENMKVY SDGFQPDGDGATIVAIGSKAKNKARLAKFIDWMYSPEGIYASSSNSGGAACPKDLGCFTT DKDGKNPTLTKFGQQAMTGDHANLKVSAKLGGSSYDDGYSKLNFKAVSQNDIDPNTGEAY NPLLWKSNQDETELFKDWSAHMENATNDIDYLQKAGKLSIAAGASYTTPQEDSTVSATRS SVKSETVNASWQAITAAGKFEKTLDEARTKIDNLGYKEVLKVDQQNAKDLIQARKDIVKQ AK >gi|148337405|gb|DS264454.1| GENE 569 623454 - 624881 1832 475 aa, chain + ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 15 373 34 399 793 243 37.0 7e-64 MTVITEANKTKARELTAQLTLDEKIAIVHAAGLFRNGNAERLGIPPLRMDDGPMGVRAEL HNDNWAPLYNTRDYVTYLPSGSAVASTWNPDPARMTGEVLGEEARGRGKDVILGPSINIK RSPLCGRNFEYMSEDPVLTAAQGVAYIQGVQESDVAACAKHYAVNSQETDRLDVDETVSE RALREIYLPAFEAAVQDGGVLSVMGAYNLVNGTKCCEHKQLLDDILRDEYGFDGFVVSDW SAVRDTKASAEVGMDIELSVTPNFDDYYFANPLKKAVEDGDVKESDVDGKVERVIAVMDA LHMLGDAHASRKPGRYATLDHAAKALDIARESIVLLKTDAHLLPLDERNMTRLLVIGANA DRIHSNGGGSAVIKALHEVSPLLGLNGELGGNVEIEYALGYDAKQINQDESWQEESLENS KGSDAKDVNRARELRDEAVAKARAYAAAGDPVVFIGGLDHEHDLEGRDRTDMRLP >gi|148337405|gb|DS264454.1| GENE 570 625030 - 626400 1700 456 aa, chain + ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 1 453 219 670 672 457 49.0 1e-128 MDYRRFQSQAQLACYTNERDAIREYDATTPITTNLMGTFKDLDYFEWAKEMDVVSWDNYP GMDTPPSFTAMCHDLMRGIGGNKPFMLMEQTPNQQNWFPFCKVKQPGEVRKLSWQAVAHG ADTVRFFQMKQSLGGCERFHGAVIAHDGTEESRVFKETAALGEELDRIGRRIMGSRIESR VAIMFDWQSYWSLEGCVGPTTGFNYPNEVHRFYRALWRRNVPVDMIASTTPLARLSQYDL AIAPALITVLPGVAETLEAYVADGGTFITGYMAGIHDEHDLVVPGGYPGKLRRLMGVWVE EIDALAPGETIEVHGGTVDAKGEIVASIIHREGAERLATYGGDEFYAGHSALTVNAYGKG KAYFVGTPLDETGMSAFMAPIIKELDLKSLDTPEDVSLSVRYGDGGTRYAFLINNSAADK RLCLSELNGGTELLTGTVINDLIELKPYGVDVIALR >gi|148337405|gb|DS264454.1| GENE 571 626569 - 629337 3916 922 aa, chain - ## HITS:1 COG:no KEGG:Dtox_0422 NR:ns ## KEGG: Dtox_0422 # Name: not_defined # Def: cell wall/surface repeat-containing protein # Organism: D.acetoxidans # Pathway: not_defined # 790 890 1259 1368 1729 78 38.0 2e-12 MRNKAIACLGAIVACATALAGIPATAMADDSAGLTPQYTYNSQNDNGMTFEKVSHADQGL SQADGVVDYTGDGTIAPYTAGLSTTGNGDRGQSYSYAAASSGDWVYIGTMYGGLGVQAIL NRDMTSLGLTSKQATALIQTMYAGNMYLGEPDGKSAGGMLFKFNVKTGKTKILMSKSTGI DGGKGVIPTFRSAFKMNGKLYFEGMVMDTNNKDLTQQEIQTAMAYQNGFPCIYEVDPANN DKLTKVYDSVDVDGFRSLVKGNVFTSTRAIGSFGNTLIAGDLKPTADGKGKALLVASKTP SDPNSYKVIADMASFDNLPAIHRQDVNGGGGIYQVQEFNGKLYVVVCTGDTSTLNEETGT MRSFAIYVGENKGDSTNKADWTWRPLVGDTAKGAKYYYGLDKSRVSAGACTLQVYGDHLY IGDYNDVSSALQGFVTKSNFVTQATNLEQSVNLYRMDKNENVEMLVGDKNDTFPKGGSTG LGSGYDNHMNQYTWQTTVHEGKMYLSTMNTTTLLEPIAQFTNGDILNMNEKDWNNTVHYL RVFLRLLWGMGPTDPASAIATQSNDQNAKVTTQTMPSTDNPEALVDWARIQAGKDASAAQ PQTTDAKSVSSAKPISLTAAQTKELVDGIKDGSIVPGSLAASGSSDEASQLFDINNELDN LGSQLSDKGSADFANNYGEVTDAFFSIADIIPDKFKGLYEMLVKLTSKANLKAYAKSLPY LAKSKRGFNLFEITDRSAANEGVTVGTVTDNGFGDPFNHGLRIFCDTDDYMVVGTANPFY GTQLWRVRNTQYAVNVSATEGGSASADVERAAKGSKVTLTATANKGYHFKEWNVLKGNVS IENNAFEMPDGSVSIQAVFEKDAVEPTTPTTPAKPATDTKPSTTPTGVTSTPSTGSSVLG MAVAAAVALIAGAAILLKKKQA >gi|148337405|gb|DS264454.1| GENE 572 629501 - 629605 65 34 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADEYAMTHFDSAIALVVRKGVLAERIGGWGGSA >gi|148337405|gb|DS264454.1| GENE 573 629670 - 630581 187 303 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|116517028|ref|YP_816079.1| glucokinase [Streptococcus pneumoniae D39] # 56 286 63 313 319 76 28 2e-12 MTAKKRILAFEIGTFFTRYVVFEDGRMGIPGTIATPVDGEEPFYQALAHIVSKQRAPLDG IAISVPGFIDTEKQVAVTAGALSILYGHEIGRKLQGYLDDPIPTWMENDANCAAMAEKLS GNAVKLDDFALITIDSGVGGALFLDGRIRRGKDWRAGELGMMIPNYETGGFHTMQDYLST IVLAEEYAKEFDVPTGSIVPATLFHRLDEPRVRKIVDRWIDYLAIGIFNIVAVADPECVL LGGGICREQQLLPLVNAALDKIPQWSDFHTVVKRCRHTNNAGLIGAYYAFETEVEGMEKV PIR >gi|148337405|gb|DS264454.1| GENE 574 630719 - 631522 1089 267 aa, chain - ## HITS:1 COG:no KEGG:BAD_0437 NR:ns ## KEGG: BAD_0437 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 267 1 268 268 458 82.0 1e-127 MSVAAWDGFLNDQSNWPAASRIGNATGATTARDTLGDKTFVKRKRMSQEERHLQILQAAV KIIATKGFWGMSLQNISDELGITEAALYHYISSKDDLLNMVLSECYDTIDADEYNAVTAA IVDADGHRVYYYPRYCLNIVLYNLQRPELVQLYSVLNGEALNPSHPAHDFFIGRHLRQWE MICSMNWLLPPDVDEERFYDLYTLAMSAMDGLQYRWLGDNSMNLLEQWMSISDIIFPDSE WQGFRDPSEHDPKNESCLLPLTLSARQ >gi|148337405|gb|DS264454.1| GENE 575 631594 - 632412 720 272 aa, chain - ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 33 272 35 271 272 244 48.0 2e-64 MQYCEDIITGIDGSEATFVRYVLDNSEEIDPKRQRPSVLVIPGGGYAMTSDREAEPIAMQ FLAAGCNAFVLRYSVAPSVFPTALLEAAEAVQRIRAHADDWHCDPSKIAVIGFSAGGHLA ANLATTAGDDTMRAHGYDPDAVRPNALMLGYPVITSGPLAHRGSFDCLLGDNSDNQVALD AVSIERHIDAKTPPVFVWHTITDDCVPVENTLMLVDACKKAGVPVEAHLFPQGGHGLALG TAETAWQGVNGIEPCVQQWPVLANAWLRRLFA >gi|148337405|gb|DS264454.1| GENE 576 632630 - 633574 1314 314 aa, chain - ## HITS:1 COG:TM1848 KEGG:ns NR:ns ## COG: TM1848 COG3459 # Protein_GI_number: 15644591 # Func_class: G Carbohydrate transport and metabolism # Function: Cellobiose phosphorylase # Organism: Thermotoga maritima # 5 312 507 810 813 334 51.0 1e-91 MENNDTGVAESVFIGGMFVLYGSQYADILEHYGRLAGMSDAEIASEAASVRAEIGQVSKA VKTAGWDGEWFVRAYDAYSRKVGTHEDTEGQIYIEPQGMCVMAGIGLDDGKAQQALKSVK ERLTCDWGTAILAPAYSTYRIELGEISSYPRGYKENGGIFCHNNPWISIANAIAGNDDEA FAVYQRNCPAYVEDKSDVRKVEPYVYCQMVAGPEAATPGEGKNSWLTGTAAWTFVDVSQY LLGVRPTLDGLAIEPHLPERFDQLTVTRVFRGVTYRIAMKRTGERTVSVDGAKIGGNVVP ALSDAKSVDVEVTF >gi|148337405|gb|DS264454.1| GENE 577 633627 - 634901 1723 424 aa, chain - ## HITS:1 COG:TM1848 KEGG:ns NR:ns ## COG: TM1848 COG3459 # Protein_GI_number: 15644591 # Func_class: G Carbohydrate transport and metabolism # Function: Cellobiose phosphorylase # Organism: Thermotoga maritima # 1 415 1 397 813 494 54.0 1e-139 MRYGHFDDAAKEYVIETPATPLPWINYLGNEDFFSLISNTGGGYSFYKDAKLRRITRYRY NNVPADNGSRCYYLSLMDSDSADAKPVETWSPTFLPCKTPLDSYKCRQGIGYTVFEASKR GIESKLTAFVPLHTNAEINRLDVTNTTDEPAVIDVTGSVEWCLWNAADDSSNFQRNLSTG EVEIERETDATPLYHKTEFKERRNHYAFYGVNAPVVGFDTSRDEFLGQFNGWDTPQVIAE GKAHDSVAHGWFPIAANRVRLELQPDETASLVFMLGYIEVAKDQKWEDPNDPAKVGIINK KPAHELFRRFATVEQVEAALKELNSYWSELLTTYSVDSGDEKLDRMVNIWHQYQCMVTFN MSRSASYYESGMGRGMGFRDSNQDLLGFVHLIPERARERIIDIASTQMEDGSAWHSAHRP RRLE >gi|148337405|gb|DS264454.1| GENE 578 635355 - 635567 392 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025458|ref|YP_909303.1| 50S ribosomal protein L31 [Bifidobacterium adolescentis ATCC 15703] # 1 70 1 70 70 155 100 4e-36 MKQGIHPDYHAVQVTCSCGNTFVTRSTYNGDHMTVDVCSNCHPFYTGKQKILDTGGRVAR FEKRYGKKAK >gi|148337405|gb|DS264454.1| GENE 579 635749 - 636837 1490 362 aa, chain + ## HITS:1 COG:MT1338 KEGG:ns NR:ns ## COG: MT1338 COG0216 # Protein_GI_number: 15840749 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium tuberculosis CDC1551 # 13 358 12 354 357 347 55.0 2e-95 MADEQFPAAVTALEEYHNIEQQMAEPEVASNPDKMRKLGRRHAELGAIVSAYTAYKQVKD DLEAAREMASEDPDFAEEAKRLEGELPAAEEKLRTALIPRDPDDARDTIMEIKAGTGGEE AALFAGDLLRMYMRYAEKRGWSVTVQSENTTELGGVKDVQLAIRAKGTPAPEDGVWASLK YEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQ SVNTTYSAVRMTHIPTGITVNMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRH SQVRSLDRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEADRLAN QK >gi|148337405|gb|DS264454.1| GENE 580 636847 - 637767 293 306 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225874212|ref|YP_002755671.1| ribosomal protein L11 methyltransferase [Acidobacterium capsulatum ATCC 51196] # 1 302 12 290 294 117 31 1e-24 MATVFETVRSAADELRAAGVDTPQHDAKLLLAEAFHTDLQHVDKAMLMGDGVERLAEKED AEPAMERFQTMLARRVKREPLQHITGHAPFRYLDLKVGPGVFIPRPETELVVQEGVDWAT RNGMYRAKVVDLCAGSGAIGLAFASEVPGSEVWAVEKSATTAEWTRRNLDETAKRYPAIA GNYHLDIADATQMPTLSQLDGTIDIVLTNPPYVPLADIPEQPEARDYDPDLALYGGSADG TLIPERIIARAAKLLRADGLMVMEHDITQGERLAAFARTCGFVDVTVHNDYTGRPRYLTA EKQPAQ >gi|148337405|gb|DS264454.1| GENE 581 638013 - 639209 1920 398 aa, chain + ## HITS:1 COG:FN1432 KEGG:ns NR:ns ## COG: FN1432 COG0683 # Protein_GI_number: 19704764 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport systems, periplasmic component # Organism: Fusobacterium nucleatum # 19 394 13 381 383 241 41.0 1e-63 MNAKFSAKCVALIAAGAMSMSLAACSGGSMDDSSSSNGSAANSDTITLGSVTTNSGTAAA YGEAEVAGFKLAVDEINAKGGINGKKVKLESMDDKGDATEASNAFNKLAGDNSVLGVVGP TISSTTAAVAPLADQPKLPAIAPAATSDSIETGGYMFRTCFKDSYQGEIAAKFAAETLKV KKVAVLYGTGDPYSSGVGKAFAAAAKKAGLDVVAEENSSSADDTEYSSQLQKIQAAGAEF LYAPYYYSVAGPYIIPQARSVGYKGYVMGPDGYDGLKMTDDKSLYNKVLYTTHYSPDDTS NAKVQDFIKSYKKANKNADPNTFTALGYDSVYMMKQAIEKAGKNATRESVRNAIAGMSFE GVTGNFTLDKKGSPKKSVVVLELKDGKPQYKTTIQPAK >gi|148337405|gb|DS264454.1| GENE 582 639384 - 640310 1447 308 aa, chain + ## HITS:1 COG:FN1431 KEGG:ns NR:ns ## COG: FN1431 COG0559 # Protein_GI_number: 19704763 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid ABC-type transport system, permease components # Organism: Fusobacterium nucleatum # 8 308 16 308 308 261 52.0 2e-69 MGDQIIMFISQIFNGLKIGSVYSLVALGYTMVYGIIRLINFAHGDFIMVGSYVLMLTIPA IVAFGLPAWVAVIPAILMCVAVGVIVERAAYKPVREKGNSMTALITAIAMSLLLENGSQA IFGADYQTVPTIIQIPTLAIGKLKIDGATIITIVLGVIIMVALQLFVTYTKQGKAMRAVS EDKEASILMGINVNSTITLTFAIGSGLAAVASLMYCVSYPQVSPMMGAMLGLKAFVAAVL GGIGSIPGAMVGGLVIGVVESLTKAYIGTITGGVITSAFSDAIVFGILIIVLLVKPSGLM GEPETEKV >gi|148337405|gb|DS264454.1| GENE 583 640315 - 641436 1680 373 aa, chain + ## HITS:1 COG:FN1430 KEGG:ns NR:ns ## COG: FN1430 COG4177 # Protein_GI_number: 19704762 # Func_class: E Amino acid transport and metabolism # Function: ABC-type branched-chain amino acid transport system, permease component # Organism: Fusobacterium nucleatum # 48 335 4 278 285 234 50.0 3e-61 MKKSMLSTKQSYLMCAVGIVVLFGILMGVCESGMASTYIKGIMMTSCIAIIMTTSLNLTI GVLGQLTLGCCGFEAIGAYSAALLSKLLVANGVAMDPTLRFLLTTLAGGVVACIFGILVG IPALRLHGDYLAIITLGFGEIIRVIIQNLKVAGGMGLDKGAAGQALIGIDRLANLYVVFW ITVVTVVLLFMFARSRYGRAVKAIRDDEIAASASGINITYMKVLVFAISAFFAGIAGGIF AQYIGSLNPAMAGWLQSINYVIMVVFGGMGSLTGSIVSAIALTILPELLRAFSTYRMLVY SVALVLIMIFRPQGIFGNWEFSLTKTINKLFYPMKVKAHGKSKQAESTAKAVKDTAKTDE TVETAADTKEAQA >gi|148337405|gb|DS264454.1| GENE 584 641433 - 642245 247 270 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 5 246 1 231 245 99 27 3e-19 MSEPILKAEHLGITFGGLKAVSDFNMTINSGELVGLIGPNGAGKTTVFNLLTGVYQPTEG EFFLDGERMNGKKTYQVVRAGIARTFQNIRLFGQMTVEENVLVAFNESFSYHMGGAIFRT PKFWKQEREMHAKAIDLLKIFGLEGLAETEAANLPYGAQRKLEIARALATGMKLLLLDEP AAGMNPTETEDLLNCINTIRDRFGIAILLIEHDMSLVMNVCQRIQVLDYGRTIAAGTPEE IANNPQVISAYLGSDDDTDSDDAKHESEEA >gi|148337405|gb|DS264454.1| GENE 585 642245 - 642949 293 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 1 226 1 231 245 117 29 1e-24 MLEVKNLSVSYGAIEAVKDISFTVNDGEIVSLIGANGAGKTTTLHTITGLVPAKSGSVMY NGVDLLKTHNNKIVTLGMAHIPEGRHVFTRMSVEENLEMGAFSLKDQSDLKKDLDMVYGL FPRLKERRNQKAGTLSGGEQQMLAMGRALMSHPKTILMDEPSMGLSPKLVKEIFSIIRKL HEQGITILLVEQNAKMALSIADRAYVLETGRITMEGDAKELLNNEQVRKAYLGA >gi|148337405|gb|DS264454.1| GENE 586 643107 - 643769 672 220 aa, chain + ## HITS:1 COG:aq_651 KEGG:ns NR:ns ## COG: aq_651 COG0009 # Protein_GI_number: 15606072 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Aquifex aeolicus # 4 211 2 194 198 94 32.0 2e-19 MSEICTVNDESLARAVEIIHDGGLVVIPTDTVYGVACDPRNIEAIRKVFAAKQRPKYKSL QVLLPSIESMEKLHLTLPVPLNRLAAMFMPGAFSPIAEAEDDCSLATLRHDPTTGKATQG VRIPNSAVALRILRATGPLAATSANRSGEESAQTVQEAADALGDAVDLYLDGGATPGHVS STVVAADPHERDGIAILREGVIRELVIRKALTLNGGALGA >gi|148337405|gb|DS264454.1| GENE 587 643766 - 644944 1448 392 aa, chain + ## HITS:1 COG:ML1137 KEGG:ns NR:ns ## COG: ML1137 COG0472 # Protein_GI_number: 15827568 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 1 360 31 396 399 218 37.0 2e-56 MRIYLFIAAVAGGVTYLLTPLIRHIAIEIGAVGEVRARDVHTVPTPRMGGLGMLIGFTVA MLFASRIPFIEGLFAQSHQAWVILAGAIMISLLGMADDLWDLDWMLKLAGQLLISVFVAW GGLQIISLPLGSLVTASPSLSMAITAFLIVASINAVNFVDGLDGLASGIVAIGGIAFAIY SYIIARSSPSYASMATLIDIAMVGTCVGFILHNWHPAKLFMGDSGSMLLGYLITCASIVM TGRLDPASIHASIYLPVFMPILLPMLVLFLPILDMCLAIVRRLSKGQSPMHPDRMHLHHR MLRIGHTVQGAVLILWGWASLIAFGSIMILFFKAQYVLIGFLIAAALLTVATMYPYLKHR IPEIREENAISGTDAQHASVGRARGDKTRGGR >gi|148337405|gb|DS264454.1| GENE 588 645082 - 646626 2065 514 aa, chain + ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 221 510 1 291 292 347 61.0 4e-95 MATIPDMNADSTFAPLPPIFAQLGLAYDDVLLLPNETDVIPSEVDTTTHLTRNITMKVPA ISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDDQAAQVDIVKRSESGMISDPLTVSPDV TLADLDKLCGRFHISGLPVVDKDSKLVGIITNRDMRFIASEDYDRLKVSEVMTRENLITG PSDISKEDAHDLLAKHKVEKLPLVDSEGRLTGLITVKDFVKTEQYPDATKDEQGRLRVAA GIGFLGDAYNRASALMEAGVDVLVVDTANGEAKLALDMIRRLKSDSAFNGVDIIGGNVAT RQGAQAMIDAGVDAVKVGVGPGSICTTRVVAGVGVPQLTAVYEAAQACRAAGVPCIADGG IHYSGDIAKALVAGASSVMLGGTLAGCEEAPGEKVLLHGKQYKLYRGMGSLGAMAPRGKK SYSKDRYFQADVTSNDKVVPEGVEGEVPYRGPLNAVLYQMIGGLHQSMFYIGAHNISEMP ERGRFIRITDAGLRESHPHDIVMTAEAPNYSGRQ >gi|148337405|gb|DS264454.1| GENE 589 646790 - 647824 1156 344 aa, chain - ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 5 337 3 326 335 123 30.0 4e-28 MPRTTIADVAQAAGVSVSTVSRALRGLDRVSPETRERIEQEAKRLHFSFSKSASSLASGK TMRVAVLLPNEISSWFNAHAFEGIYEVMSKAGYDIVPYIVWTQDDLDAFFQNLPGNRNVD AVIEASFDFDEAKKQVLGDLTIPVVGMNAPSTHGLDAGVAIDDEASMATIVRFLKSLGHK TLAYIEQPINTTPFVCSDRLRKKGFSEASQACGYADEDIIVMPSLSHIDARSEQDIYSSI VAQLLSAPKQPTAICVSVDAVAAPLLKELRRMGWRVPQDVSLVGFDDDDTATALDLTTMH QDPAEIGRIAARKTLALLNGETLDEPFTVMPTSLVLRGTTERVS >gi|148337405|gb|DS264454.1| GENE 590 648156 - 649913 2298 585 aa, chain + ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 10 581 31 545 546 366 41.0 1e-101 MTEVNDPSLWWKQAVVYQVYPRSFKDSRGEGLGQIAGVTEKIGYLKELGVDAIWLSPFYP SQLADGGYDVDDYRNVDPKLGTMDDFDALAKAAHADGIKIVVDIVPNHSSNLHEWFKAAL AAKPGSLERDRYIFRDGKGPNGDEPPTNWQNHFGGPAWTRVPDGQWYLHMFTKEQPDWNW KNEDVRADFIKTLRFWLDHGADGFRVDVAHGLAKDLDRDDLDDYVVWCTNDQPEDGSHPV IDRDEVHDIYHEWRKVFNEYDPPAFAVAEAWVRPSRQHLYASPDDLGQIFNFEFAKKDWI RDDMHLAIEEGLESAERSGSTATWVMSNHDVVRHATRYALPQVPTGEYHRLPLDWLLRDG TTYREDRALGTKRARAAIMMEMALPGSAYVYQGEELGLFEVADIPWDELEDPSAWRTSRS ASTKGRDGCRVPLPWVAADAPQLDDPNDEFGHGGSFGFSPADAKAEPHLPQPKWYKDFAV DVESADPDSMLNLYRRVLALRHELQTTDLSLEWLPEDQPGKAHDGANGFPGGTIAYRRAN GWASITNFGEEPITLPQGEVLLTSGPLTDDGKLPQDTSAWLKLAD >gi|148337405|gb|DS264454.1| GENE 591 650152 - 650805 932 217 aa, chain + ## HITS:1 COG:MT2586 KEGG:ns NR:ns ## COG: MT2586 COG1949 # Protein_GI_number: 15842039 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium tuberculosis CDC1551 # 17 210 5 198 215 185 48.0 7e-47 MVDAHDGETYTSEGSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKP SQKAVDHMNDFVRAMHTRSGLINEWEHGLSLDEAQAKVIEYVRKFTPAGVKPLLAGNTIG SDKKFLDHYMPELMENLHYRTIDVSTFKELARRWYPAVYLNRPPKNGGHRALADIIESLD ELRYYRKAFMAPVPGPSEAEAKAIASEIQETSLLNKD >gi|148337405|gb|DS264454.1| GENE 592 650833 - 651732 1080 299 aa, chain + ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 14 298 15 275 277 195 39.0 8e-50 MTAADWTTIGQPQDIRLVVADMDGTLLDERSRIPDGFWPMLARLKRRGVEFVPASGRQYA TLRNMFADKAAEILDGGELSYIAENGNVVALDDKVVEVHGVDLDVTRHVIDLVADAAASG EHNVGLVVCGLKSAYVQRSDKPFLDEVGKYYAALSIVDDLHEVLDFAQEPSAYTPDGDAE IVLKLAILDLDGSERFTNEKLTHLRADYQVVVSGKLWVDIMNIETDKKQGVEALQRVLGV TPAQTAVFGDYLNDLLMLEAGDWSFAMGNAHPDLKAAARYIAPSNVEHGVLKVVDRLVA >gi|148337405|gb|DS264454.1| GENE 593 651777 - 653192 1597 471 aa, chain + ## HITS:1 COG:SPBC887.14c KEGG:ns NR:ns ## COG: SPBC887.14c COG0507 # Protein_GI_number: 19113280 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Schizosaccharomyces pombe # 15 431 327 781 805 223 32.0 7e-58 MRQSEALAILGSGASVFLTGAPGAGKTYVLNEFIRQARADGASVAVTASTGIAATHINGT TIHSWSGIGLATALTDNLVKTVRTRRKRKLQEADILIIDEVSMLHAWLFDMVDRICRIIR RDERPFGGLQVVLSGDFFQLPPVSVSGRNNDLIAPSAEYLASRERYMRAGLNPEGFVTES LVWRELNPVVCYLTEQHRQDDGQLLNVLTDIREGAVDDGDRNVLLTRLGAIPEPGQQAVN LFPVNRQADALNDLRLFEIKEEPHEYLAESEGAANLVERLKKNMLAPERLYLKTGAAVMA VRNDTDHQYVNGSLGTVRGFTTQSQGGWPIVEFENGNIVTMKPNSWQMQDGDAVLATVKQ VPLRCAWAITIHKSQGMTLDRAVMDLRRTFAPGMGYVALSRVEGLDGLYLQGVNERMFLV SPDAVRLDGQLRLESAQAADTLASDGVGAFRARMPQPAAGEDDEFAQDVLF >gi|148337405|gb|DS264454.1| GENE 594 653207 - 653593 437 128 aa, chain - ## HITS:1 COG:no KEGG:BDP_0629 NR:ns ## KEGG: BDP_0629 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 128 1 128 128 204 81.0 8e-52 MRHVTAHISIWNKLGWIGIICYFVFAAAAPEVLTEGNQWIGLCLAVLCVTLISLPWKKPF NAIALAGMVIWIIVTRAIPGLEFLQRNPLWLLVGLACVIASCWDPDPESVEDEVELDPDL ARSLQAMG >gi|148337405|gb|DS264454.1| GENE 595 653756 - 655591 2524 611 aa, chain + ## HITS:1 COG:Cgl1948 KEGG:ns NR:ns ## COG: Cgl1948 COG0442 # Protein_GI_number: 19553198 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 6 606 4 580 588 595 53.0 1e-169 MTKALRMSTMFLRTLREDPADADVVSDKLLQRACYLRKAAPGIWTWLPLGLNVLNKIENI IREEMASIDAQEVHFSGLLPREPYEATHRWEEYGDNIFRLKDRHEADYLLAPTHEEMFTL LVKDLYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTLDKEGLVKAYMD ERGAYERIFNRLDLKYVPVHAMAGPMGGFESEEFLAPMEIGEDTFAQSPSGKAWNVEALT TPEPEAIDFTATPAAEKRPTPDAATIDKMVEFANANHPRSDGRDWQASDILKNVVIAVMH PQDEDHDEPWRELVVVGVPGDRTVDMKRLEAQFTPAEIEEATDEDLKKHPELVKGYIGPM ALGPQARDGKKAENASETGDALRYLIDAHVARGSAWFTGADEQDVDYYDLVYGRDFEADG TVEAVQVRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSNALGLKVLDQNGKTVPVWMGS YGIGVSRVMACIAETHHDEKGLAWPAVIAPAQVHVVATGKDAAAFEAAEQLIGELEAKGI EVIFDDRKKVSPGVKFKDAELIGVPIIAVAGRDTVNNGTIEVRDRNGENAEAVPVADAAQ AIADRVAALLK >gi|148337405|gb|DS264454.1| GENE 596 655985 - 656563 492 192 aa, chain + ## HITS:1 COG:no KEGG:BAD_0457 NR:ns ## KEGG: BAD_0457 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: DNA replication [PATH:bad03030]; Mismatch repair [PATH:bad03430]; Homologous recombination [PATH:bad03440] # 1 192 1 192 192 330 98.0 2e-89 MAQQQGLLTITGYVGGQPTQFNREGMPHASSFRLASTRHYFDGRTQQWKDLPTTWITVKA YRGLSESICQSFKKGEPVIVTGVLAAESWVDQNGKQQSKLVMEANAAGHDLSYGVSTFRK LAKKNDSGQQDAQPGQALGRDPYVQAAQQRGETSVNAMGGQSSGVDEQGGSQAGADSNAA EPLREEFGGDGF >gi|148337405|gb|DS264454.1| GENE 597 656602 - 658692 2834 696 aa, chain - ## HITS:1 COG:ML2613 KEGG:ns NR:ns ## COG: ML2613 COG3590 # Protein_GI_number: 15828409 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium leprae # 7 696 5 666 667 531 42.0 1e-150 MNNTSNSLVSGIDPASFSAVTGPSQDLFRFVNGPWVDMYRLPDDRSRYGSFDKLAEDAEN QIRDILEEDDCPAVKSRALYHSFLDVDAIDAAGLAAIEDQLASIDEAEDKAALTRALGAM NPTGGPDLIGIAVYGDPGAPETNVVHIEQDGLDLPDEAYYREDHYAPIREAYVEMVAKQL KNAHLAAGDEDAHAQAKRFLDVETRIAANHWDNVSTRDSVKTYNPTDYADLCAMLADVDL DAWIDAWQNAYDATTAAAVQPLDFRGCFSHTIVHEPSFLTGLNAFWKEASLDDLKLWARV HVVIGSTLELPHEFDETNFDFYGKTLSGQKEQRVRWKRGVSLVNGICGEDVGREYVKRHF PETSKQRMEQLVGNLIDAYRVSISNSTWLGDETKAKALEKLSKFVPKIGYTNHWRDYSAL DVREDAGFAQNMRAANLYETGYQLAKVGKAVDKDEWLMNPQTVNAYYEPSMNVIVFPAAI LQPPFFNPDAEDAANYGGIGAVIGHEIGHGFDDQGSQYDGDGKLNDWWTEEDKANFKALT QKLIDQYNEFVPTQLAEKYSDDPSKAPHVNGALTIGENIGDLSGVNIALKAYAFALDEAA GRGKDGSTEAIEAALADAPEIDGFTGLQRFFLSYASIWRTKNRDELAEQYLQIDPHSPAE CRTNGIARNVDLFHKAFGVQPGDGMWLAPEQRVRIW >gi|148337405|gb|DS264454.1| GENE 598 658859 - 659596 1128 245 aa, chain + ## HITS:1 COG:aq_076 KEGG:ns NR:ns ## COG: aq_076 COG0024 # Protein_GI_number: 15605674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Aquifex aeolicus # 1 242 14 256 258 183 39.0 2e-46 MKPAGRFVGGILRDLKEFTKVGTNLLEIDEFVHKRIVDRKGASSCYVDYAPDFGTGPFAH YICTSVNDAVLHGVPYDYNLKDGDLVSLDLAINVDGWVADSAISFCVGTQHPDDLRLIKC TEEALAAGIEAAQPGNRLGDVSCAVGDVAREYGYPINLEFGGHGVGHIMHGDPHVPNDGK AHHGYKLRPGLVIAIEPWFLKTTDEIYQDPKDGWTLKSEDGSRGAHSEHTIAITENGPVI LTVRD >gi|148337405|gb|DS264454.1| GENE 599 659737 - 661032 1774 431 aa, chain + ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 430 7 431 431 458 53.0 1e-129 MATANLSVESKDFTLPVVEATAGADGIVVSTLRNDGWVTLDPGFLTTAQCESKITYIDGK NSILRYRGYPIEQLCEQSDFLEVAWLLRHGELPNKDQYDRFISDINHRTMVGEDFRTFMG SFPRTAHPMSVMASAVNALATFYPDTTDINDSDQLDEAATIIMAKARTIVSYIFRRRRDE PMLYPDYSRGYVDDFLRMCFAVPYEPFESDPLYVHALGRLLIIHADHEQNCSTSVVRIAG SAHANLYSAVAAGINALSGPLHGGANEAVLRQLKAIRDSGKTVKEFVEDAKANGHRISGL GHRVYKSYDPRAAIAKTYLQKIMERADTLKLPADERALFDVATELEQIALNDDYFVSRHL YPNVDFYTGLIYRAIGFDPSMFTTLFALGRIPGWIAQYREMLADPNTKIGRPRQVYTGYT ERDYVPMDQRH >gi|148337405|gb|DS264454.1| GENE 600 661174 - 662166 1516 330 aa, chain + ## HITS:1 COG:Cgl1082 KEGG:ns NR:ns ## COG: Cgl1082 COG2171 # Protein_GI_number: 19552332 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Corynebacterium glutamicum # 6 330 3 297 297 297 52.0 2e-80 MTEQRTAWGWGLASIDAAGNTLDVWYPELTLGEAPAETSRPNHNFGAIAHDEADARGVRR MPVFTVSKLDEPIEDAADAYLRLHLLSMRLAKPNTLNLDGIFAKLNNVVWTNYGPFAVDD FALRKLDVMAATRQSGAVLAPHVDVNVLSIDKFPRMVDYVVPTGVRIGDADRVRLGAHLS EGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGNGSDIGGGASIMGTLSGGGKLKNSIG EHSLLGANAGIGISLGDNCVVEAGLYVTAGTKVTIYDKAKVAAGEPLETVKGAELSGKDN ILFIRNSVSGRIEARYRKTGIELNEKLHKN >gi|148337405|gb|DS264454.1| GENE 601 662216 - 662695 656 159 aa, chain + ## HITS:1 COG:CAC3536 KEGG:ns NR:ns ## COG: CAC3536 COG1576 # Protein_GI_number: 15896772 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 1 159 1 159 159 187 61.0 9e-48 MKITLITVGKVKEKYLRDAIAEYSKRLGRYCKLGIVEVADEKTPEHASDGLERQIKAKEG ERIAKHIRDDAFVIALAIEGKQLTSEQLAAKINDLGLHGTSHIQLIIGGSLGLDPAILKR ADYLLSFSKMTFPHQLMRVILLEQIYRAYKINAGEPYHK >gi|148337405|gb|DS264454.1| GENE 602 662753 - 662884 118 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDYRDEREQRERRRRTMVRTVCIVIAAAMLLSLVIPAIYAGL >gi|148337405|gb|DS264454.1| GENE 603 663069 - 664199 1576 376 aa, chain + ## HITS:1 COG:Cgl0778 KEGG:ns NR:ns ## COG: Cgl0778 COG1186 # Protein_GI_number: 19552028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Corynebacterium glutamicum # 5 370 4 367 368 399 59.0 1e-111 MAEFDYSEAISEARAKYESISKALDVDRLTAEAKDLEVKAAEPGLWDDPENAQKVTSKLS AVQSQLKRLASADQRIEDVETLVELGQEEEDADTLAEAKAEVESIQKDLDDMEIQTLLDG EYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRWAERNGYKAKVMDTSYAEEAGIKSATF QVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDVPDSEIRV DTYCSSGPGGQGVNTTYSAVRITHIPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE EEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKDLRTGYETSQTQAVFDGDIDEFIEAGI RWRHEQRRAAAEEQEA >gi|148337405|gb|DS264454.1| GENE 604 664223 - 665461 1249 412 aa, chain + ## HITS:1 COG:MT3186 KEGG:ns NR:ns ## COG: MT3186 COG2884 # Protein_GI_number: 15842673 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase involved in cell division # Organism: Mycobacterium tuberculosis CDC1551 # 3 227 1 225 229 275 60.0 1e-73 MALISLEHVSKVYPKGTRPALDDISLDIDRGDFVFLVGASGSGKTTLLSLLLREEEATDG EIRVAGNDLRRLSARQVPHYRRQIGFIFQDYKLLNNKTVWENVAFALEVIGTSRSTIKSL VPKVLQTVGLTGKENNYPHELSGGEAQRVAIARAYVNHPQILLADEPTGNLDPTTSLGIM EVLDAINRTGTTIVMATHNEEIVNSMRKRVVELHTGKIVRDEQQGSYDSALYFPDAEVES KSHQALGTSDPNAKYRRQNAIDSTNAPDDTVDVEGATRAETVVNAVDVVAAAVHDGQGND GIARLAKSVHSGRTGRYGEAFASVETTLTWGKGLSLEQMADQEQAEQTERNEQAKTSAEN DASETGADEASALSAPPAPPVPPTQTEPPTPPEPPVPPAPSDENPEDTKEHD >gi|148337405|gb|DS264454.1| GENE 605 665461 - 666384 1263 307 aa, chain + ## HITS:1 COG:MT3185 KEGG:ns NR:ns ## COG: MT3185 COG2177 # Protein_GI_number: 15842672 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 306 1 296 297 124 26.0 3e-28 MRFRFILSETWNSLKRNVSMIISVMLVTFISFLFIGVSGLMQAQITAAKGEWYDKVEVVV WLCPDGASQAASCSSGKAPSNQEIVDLENVINEEAGNIVSKITYVSREDFYKNTFLKQYP NGEYQGRVLTAADMQGSLRLKLKDPTKYQVVSEVLSGRTGVEEVQDQRKIFDPVFSVLNR ATAVTVALAGVMILVAIMLTGTTIRMSAASRKNETEIMRLVGASNWTIRLPFVLEGVFAS LIGSLLACGTLSAMVKLFITDWLSKSVQWMPLINQKTVWLLAPALVVGAVVLSIVASSIS LRKYLKA >gi|148337405|gb|DS264454.1| GENE 606 666472 - 667902 1620 476 aa, chain + ## HITS:1 COG:SA2437_2 KEGG:ns NR:ns ## COG: SA2437_2 COG3942 # Protein_GI_number: 15928230 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 363 470 6 108 117 70 39.0 6e-12 MSRKMTRQVRPIVGLMLASAMFCAGGVAVVAAPAPQAHAVSMSEYQAKVSNHAKLKSQLV GVSSDLADTILQLADLNDNQIPAAVEAAESAQQAAEQAQSLAEATTQRLQAAQQDKANLE EQIKQTGSDYDDAKAAVAQLARESFHGSSTSDVLDFVTDSTTADDFVNKMQSQAAVTRSE SNAATDAANELNTSMNRKDRLGAIEQKITQLKEQADQQAASAQQAASEASAKQTALQKLR DEGTAKREKLESQKSQLTTQSAKEAADIVAMKSQIDSWNNQYNNSNNAAVNPNNNQQQSR PNNNTNYNPAPAPAPAPAPAPTPNNNNSGGASGMNYAVPGNCPAGSGYCYGHNTGNTVGG AAYPSRQCTLWAYLRRSQLSLPVGSYMGNGADWANTARGLGYLVNNTPHVGAAMVFARGQ SVGGHWTADWQYGHVAVVERVNADGSVLISEGGTGFATFPAWETISNAGAYQYVHY >gi|148337405|gb|DS264454.1| GENE 607 668031 - 668510 871 159 aa, chain + ## HITS:1 COG:ML0671 KEGG:ns NR:ns ## COG: ML0671 COG0691 # Protein_GI_number: 15827281 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Mycobacterium leprae # 6 151 8 152 160 150 55.0 1e-36 MAKEQGTKPIAQNKKARHDYAIEDKYEAGLVLTGTEVKSLREGRASLAESFITIDRRGEM WLEGANIPEYLNGTWNNHAPKRKRKLLLHAAQIDKLARQTQAKGFTIIPLSLYFKDGRVK VEIALARGKKEFDKRQSLREEQDKREALRAMRYANKQVR >gi|148337405|gb|DS264454.1| GENE 608 668637 - 669584 1511 315 aa, chain + ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 60 314 80 334 334 149 34.0 5e-36 MQAGKALKTAAAFMLSVAMLATGAACGTSDDSDASASKSSSKSSELTGYDVSGVKKDDAI AKMLPDYVTKDGKLTIGMDTSYAPAEFLAADGKTPVGFDVDIAKALAGVFGLEADPETAN FDSIIPAVGAKYDIGISSFTVTKERLEAVDFVSHFNAGSAWAVKKGNPNKVDTSDLCGKK VAVQTATMQETAANKMAKQCKADGKAEMDVISSKLQTDVTTNVVTGKADVFYADSPVAGY AIAQTDGELETLGKTEGIAPEGIVVKKGDQQMDEALQKALQKLIDDGTYMKILKYWGVQD GAISKPEINTPGTNE >gi|148337405|gb|DS264454.1| GENE 609 669698 - 670630 1327 310 aa, chain + ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 55 309 79 333 334 157 35.0 3e-38 MRNLKGWAALALSAAMVVSMGACGTSDKTDSQASVDSNSSSTTGYDVSGVKKDEKIAKML PSSVTKDGKLTVGMDTSYAPAEFLAADGKTPVGFDVDIVKALAKTFGLEADPQTSNFDSI IPSIGSKYDIGVSSFTITPERMKAVDFVSMFKAGSTWVVKKGNPGKIDTSDLCGLKIAVQ TGTTQEEEVNKGAEQCKADNKLDIQILSNKLQTDVTTNVVTGKADVFYADSPVAGYAISQ TDGQLEALGEDVGVTKEAVAIKKGDSDTAKAVQAAMQKLMDDGTYMKILKHWGVESGAVD KAEINPTDLG >gi|148337405|gb|DS264454.1| GENE 610 670818 - 671747 1568 309 aa, chain + ## HITS:1 COG:Cgl1300 KEGG:ns NR:ns ## COG: Cgl1300 COG0834 # Protein_GI_number: 19552550 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 69 309 92 334 334 137 34.0 2e-32 MSLKFKSFAALALSAAMMFSVAACGTTDSGDAKSDSKAKNTTVGYDVSTIKKDDELAKLA ASAKTVKDGELSVGMELSYAPAEFYAEDGKTPVGYDVDMSKAIAQTLGLKPKIVSSMFDT IVPSIGSKYDLGITAMTITEERLQSVDFVSYYRAGSTWAVQKGNPKKLDTSDMCGAKIAV QTGTVQEDEANKIAKGCKADKKAEVMSYKRQAEAATAVATGKADVFYADSPVAGYAISQT DGQLEALGDVEGVAKQGIAIKKGDQQLDEAVQKAVQKLMDDGTYMKILKHWGVESGALDK AEINPTDLN >gi|148337405|gb|DS264454.1| GENE 611 671782 - 672765 1382 327 aa, chain + ## HITS:1 COG:Cgl1299 KEGG:ns NR:ns ## COG: Cgl1299 COG0765 # Protein_GI_number: 19552549 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 14 287 15 282 316 254 52.0 1e-67 MAKKQVDGDGLDIPNRIKALPVKRTGPIVAAIIVALFAAMLVQALVTNPRFEWNVVWKYL FNENVLEGIKYTLLLTVISMVIAIILAVILAVMRKSINPVLRGVSWFYIWFFRGTPVYTQ LVFWGLFAVLVPRIGVGIPFTSIEFWSIDSQSVITAFNAAWLGLALNEAAYLAEIVRAGL EAVDPGQTEAAKALGMKRTLIMRRIVLPQAMRIIIPPTGNEFIGMLKTTSLVNAVPFTLE LQFATTAIATRLYKPIPLLIVACIWYLVITSILMVIQSRLEKHFGKGFDARPAGARGKRT PLPGKTFGEPKDDVDKQNEATFAGMTA >gi|148337405|gb|DS264454.1| GENE 612 672777 - 673571 260 264 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 27 238 20 219 223 104 33 8e-21 MSEITTNEIVPAVKATQVHKAFGNLHVLKGIDMTVMPGTVTVILGPSGSGKSTFLRLINQ LETLTGGEIDVDGEMIGYKYVDKGGERVLQTLNDKEVAEQRSKLGMVFQRFNLFPHMTAL ENVMEAPVHVKHMDKKEARELAIQELNRVGMGERLDYYPAQLSGGQQQRVAIARALAMKP EIMLFDEPTSALDPELVGEVLNVMLDLAKEGMTMVVVTHEIGFAREVADQIVFMDGGVVV EQGGPEIIDHPSEPRFKDFLQHVL >gi|148337405|gb|DS264454.1| GENE 613 673890 - 675167 813 425 aa, chain - ## HITS:1 COG:no KEGG:BLJ_0739 NR:ns ## KEGG: BLJ_0739 # Name: not_defined # Def: signal transduction histidine kinase-like protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 85 421 80 380 388 83 25.0 2e-14 MANIKTMIAPRATQRLHHHKMHIALCLVATILMAAVLTFLPATTPTQWIICIIACCCPLG IAFAPVPMSVISFAVVLLLMFTPGISLSDAGSIIHMLTPLAIGTLAYSTPTQWSIWGLVT SIVTLLLAFDPREALSQGDALSFFVLLALYIVTYAMCASIRTIAIDDRQRHRDAELELLQ TQQAHQREVTRFAQMTHDAVTASLSSIFLLAQQHIDTLDTAGKTADASDEDWRTVRQLSE SALASIRSVIRTMNASDERPEDHLDGALHNLPLPQRIGIAIEQGQHLLVPHHMHVDVHTS GQISSPACTRSGDEAVTLIGEIFTNLLRHASPDSAPMLTISYDDDNMSLMQTNALTHKNT RRHGTGRQSPEASQGPAASGDALPRSQSGLLLHRGVIESLGGELRFNSEDETWTLYARIP LHPNV >gi|148337405|gb|DS264454.1| GENE 614 675179 - 675880 631 233 aa, chain - ## HITS:1 COG:CC1150 KEGG:ns NR:ns ## COG: CC1150 COG2197 # Protein_GI_number: 16125402 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Caulobacter vibrioides # 19 223 2 191 201 77 25.0 3e-14 MSQQQTPSATGSDQTTGTVQVVLVDNDILALKMLREIMSAWPRVAITWTEHNGSDAFDHY RQCESGIRDLPDLFITDISMRGLSGVDMSRAIRYTNGTMPILGITSYEPTQFYHDAADAG MQAVIGKNELSALKSIIMEVADTGALAVRPPFEVPGRAHLRIRQEGLPYILSLSQQEKQV LTMCSHGYSNADIAQVLDVSPSTINTYITRASRKMGVASKREAVALWTKTIGL >gi|148337405|gb|DS264454.1| GENE 615 676225 - 677379 589 384 aa, chain + ## HITS:1 COG:no KEGG:BAD_0485 NR:ns ## KEGG: BAD_0485 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 16 384 37 393 393 252 42.0 2e-65 MRMHHQKTGGNRNAVRNTVSVSVAVLLALVMLAAGVCGGFLLTREPEPAAFESTTRAGTL VVQSEPYDDERSVTVTVERSESSSVAAPVGGVVTELRQCASGSSIESGSAFIAVDGQPQL ALYLRTPPYRTMTSGMKGGDIAALNAELRRLGYTAPDSDVMTWDTVKAFNALAAHAGTQS ATQERQWSIDTSLFAWLPQQKVTVKECQARYGGHVEQGADVLTTTSQPVRATFRRNDSSM LRGDRVMEVNGATFTITDRTADSTDASLLSAIGASNEYRAAQQPSASGQASDTAGSQSDT GQDTASNTINVTYRWKLAKTLNVVSVPPAAMYDVSADSACVVSRGKPVAVHVVASQLGKS MVSVESGASLTSVNVPASTGKACR >gi|148337405|gb|DS264454.1| GENE 616 677424 - 678074 193 216 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 27 202 13 204 223 79 30 5e-13 MAGTSTVQDDSCDERSAHVQLDDVGHSFDGDDWLFRHITMTLYPRRVYALVGPSGSGKST LLSIVAGWQQPAQGKVIRVSCGRVCWVLQNPHGVARRKVIDHVALPYISRGDRRNEAEEH ALSLLRVFGLDHLAAKQFRDLSGGEAQRLMLARAVASHAGLLLVDEPTAQLDLATAASVN RTLHGLSISGAIVVVATHDPRTRDACTDIIDLRDYQ >gi|148337405|gb|DS264454.1| GENE 617 678134 - 679249 109 371 aa, chain + ## HITS:1 COG:no KEGG:BAD_0487 NR:ns ## KEGG: BAD_0487 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 371 4 381 382 211 35.0 4e-53 MRLRGVVDEAWRDIVSGTSHAFMLMLILAALVGGLSAADLFSIRSIAQQVDRYIASGAST YVIEFKGRISGEACERLSSVDGVLASGALRSRNDKVTSAVLPSAGIPSLDATTGALGVFA SSTRSSGATLTARDYDGIWLSSQAARSVHARAGNRLALRAGGRVRVAGVFQYPDDGRSTS YDYVALSQVPAAADDFDQCLVKAWPVPDAMQSLLQSTVSSWSSDASQQPTISQLNSTQGT QLDAVKTFRERQSALAPVVMFVSALFAGYAAVRARRLELASAMHCGEPKIALWLQMLLET LMWCCSAIIVTAPLIVWALTHMETGIIISSTTLVGILSRIPAAALVGVLAGASMAMLITR ERDLFRYFKNR >gi|148337405|gb|DS264454.1| GENE 618 679371 - 679667 193 98 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486930|ref|ZP_02028337.1| ## NR: gi|154486930|ref|ZP_02028337.1| hypothetical protein BIFADO_00763 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00763 [Bifidobacterium adolescentis L2-32] # 1 98 1 98 98 137 100.0 3e-31 MKKKAKTALAAVTASLLLATGLAGTANAKDVWNRGVMYWTYSMATAQGVYSQHVLTYSLN GGTLKKAYGKWAPTYQKSYANAHGQPLKFYTANWRVYK >gi|148337405|gb|DS264454.1| GENE 619 679678 - 680178 410 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486931|ref|ZP_02028338.1| ## NR: gi|154486931|ref|ZP_02028338.1| hypothetical protein BIFADO_00764 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00764 [Bifidobacterium adolescentis L2-32] # 1 166 1 166 166 326 100.0 4e-88 MLTDIVVRVRCIVSIFGIIVACLACVACGTERQDAVPSPSQTTAKAEDGTEFTGAYARRF ADTYDNLQTGFARNLIKDGKISEKDIAALESKVMDCICAQAQSEDDFPTFDLTDGALTPV PYTGANAQKDNRVAKECMERYDGYKLSDLSQYVYRHEHPDDTHLSN >gi|148337405|gb|DS264454.1| GENE 620 680284 - 680967 417 227 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486932|ref|ZP_02028339.1| ## NR: gi|154486932|ref|ZP_02028339.1| hypothetical protein BIFADO_00765 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00765 [Bifidobacterium adolescentis L2-32] # 26 227 1 202 202 365 100.0 1e-99 MGTSNIARHRHTGVTTFVCVAACCLMLLSGCGGATHIDSSAGTATGASSSATAQDGTVFT GPYAQQIKRTYDNAHQSLTKKILKDSKITDQEFLELSQHFSDCAQQQNVEVTVDSQGGMS TSYPSGMSEADGDAIVKQCDADNDFTDMNMLRGDMSSNPNNEDPVVPLLKCLKQYGLAEQ SMTVEDYKAIVSDESKDRDVFGKYFDESVPGYDAAKAKQYIACQTEA >gi|148337405|gb|DS264454.1| GENE 621 681195 - 682952 2356 585 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 4 585 50 625 625 713 60.0 0 MERVAVRKKAGRLANLVQDIERDPMPDATVGIGHTRWATNGVPNDTNAHPHTSRDGKVAI IHNGIIENASQLRLDLQTEGYRFVSETDTEVAAKLLGKISDKIIEETGKPDLFKAIRRLA RMLEGAFTILATDVRQPDIVVGARHDSPLVVGLGDGENFLGSDVAAFVAYTKRAMEIDQD QAVMVSADKVVVSDFMGNIVEHPKTYTVDWDASAAEKGGWDSFMDKEIHEDPAAVQRTLL GRLDENGNINLDEVRIDEHDFKAIDKIIVIACGTAAYAGMVAKYAIEHWVRIPVEVELAH EFRYRDPILTPRTLVVAISQSGETMDTLMALRHAREQGSKVLAICNTQGASIPRESDAVL YTHAGPEVAVASTKAFVAQITAAYVLGLYLAQVKGAMYRDEIAQTLDSLKDMPRKIQWVL DTQTKTVQEAAKQMVDAKSFLFLGRHVGYPVAMEGALKLKEIAYTFTEGFAAGELKHGPI ALVDEGEPVVFIVPPARGRNVLHAKVISGIEEVKARGAYIIAVAEENDPDVERYADVVFW RPACPTLMSPLVDVVPLQLFAMDMAKLKNYDVDKPRNLAKSVTVE >gi|148337405|gb|DS264454.1| GENE 622 682945 - 683733 512 262 aa, chain + ## HITS:1 COG:Rv3300c KEGG:ns NR:ns ## COG: Rv3300c COG0564 # Protein_GI_number: 15610436 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Mycobacterium tuberculosis H37Rv # 19 254 72 285 305 192 47.0 6e-49 MNSALGNGSKDGPNAGRGHRYVTEEPHIPFEYEVLYEDERIIVIDKPHFLATTPRGMWYR ETALIRLRERCGEPDIVPAHRLDRPTAGVVVFVRDPAVRGAYQMLFQNHMAVKTYECMAP LAPPQRPRYGTVEQVDRHRPFPTVRRSRINKDRGRLQAYESADMPNAETLIERGDDVWHI DGKPFVNYTLHPRTGKTHQLRVHMNSLGLPILGDDFYPDIVQRAYDDFSQPLELVARELR FDDPLNGEPRRFVSHVPLGAGL >gi|148337405|gb|DS264454.1| GENE 623 683842 - 685134 2022 430 aa, chain + ## HITS:1 COG:SPy0324 KEGG:ns NR:ns ## COG: SPy0324 COG3633 # Protein_GI_number: 15674487 # Func_class: E Amino acid transport and metabolism # Function: Na+/serine symporter # Organism: Streptococcus pyogenes M1 GAS # 8 409 1 402 404 369 55.0 1e-102 MGKISKAVRGVADIYNGASLIVRIIVGLIIGTVLALTMPHVTWIGEFGTLFVSALKAVAP ILVFVLVASALAQGTSKLDRRFGTVLFLYLFTTFLAAVVAVLTSRLFPQTLSLGKAAKAD VVPQGLSEVIQTLLTNIVANPIQAIIDGNYICILMWACLFGLAMKSIANESSKAFMSNVA DAVSQVIRWVINLAPFGIMGLVFTNVADNGLSAFTKYGSLLLLLVGTMLLMVLVFGPLVI FIFLRRNPYPLVYRCFKESGLTAFFTRSSAANIPVNMQLCEKLGLDKDMYSVSIPLGATI NMNGAAITITIMAMAAANTLGIQISLPAAILLSVVSALGACGASGVAGGSLLLIPMACSL FGISNDIAMQVVGVGFIIGVIQDSVETCLNSASDVEFAATAEYHAWLKQGRQLPAFMYSK KERAKLGIEA >gi|148337405|gb|DS264454.1| GENE 624 685324 - 686757 1691 477 aa, chain + ## HITS:1 COG:AGl3319 KEGG:ns NR:ns ## COG: AGl3319 COG1653 # Protein_GI_number: 15891778 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 40 373 26 358 423 125 29.0 2e-28 MGVVLKSAKLVKQLTAICCAGVMAASAAACGANTDTRTQITVWSWEPSMKQVIAGFEKDN PDIRVVWKNTSGYDKLNNAIQDGYGIPDVVQLEYYALRQYAVSSQLVPITGRTEGYADFY TPGTWASVQLNGRVYGLPMDSGPMAFFYNNSVFEQVGVDASKIRTWDDYYEAAKKLKKIG VYITADSGDASFYDTMIWLAGGRPFSTSNDGKNVTIRLTEDKGTREFTEFWQKMIDEGLV ATNLTSWSDRWKSAVGQGKVASLFSGAWLPSLLMSDIPGAAGLWRVAQMPTPDGKATTSE NGGSALAVLQRSRKPEASYRFIEYACHNAKGITTRVDGGAFPADKNTLSDSKFLSKTTVT DDRGIEVPYFGGQEYNRVLSQAAENVSTGYQYLPFEVYARSDFRSTVGKAYKWSSLLRKE QNRLNIIAAGGQVSDTSNIGDALKNTESSDRIKLKGGIALWQKDLKEYGANQGFTIQ >gi|148337405|gb|DS264454.1| GENE 625 686871 - 687641 1099 256 aa, chain - ## HITS:1 COG:lin0253 KEGG:ns NR:ns ## COG: lin0253 COG1521 # Protein_GI_number: 16799330 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Listeria innocua # 2 254 1 253 259 220 41.0 2e-57 MLLMAVDIGNTNVVIGFIDDGRIAGTYRITTKANHTSDEYGLMITQFLALSGYKPADVDD VIISSVVPKVMHSFRASIVKFLDIDPMIVGPGIKTGLNIRMDNPQNMGADCIADCAGAYY EYGGPILVADFGTATTFNYVTADASVISGLITTGIRTAAAALWEGTAQLPEVEITRPKSI LAKSTKPAMQAGLYYNFLGGIERTIAQFHKEIDEDFRVVATGGLSRVFADDTNMIDIYDP DLIFKGMRHIYDRNVR >gi|148337405|gb|DS264454.1| GENE 626 687733 - 689013 1376 426 aa, chain - ## HITS:1 COG:SA1054 KEGG:ns NR:ns ## COG: SA1054 COG0452 # Protein_GI_number: 15926794 # Func_class: H Coenzyme transport and metabolism # Function: Phosphopantothenoylcysteine synthetase/decarboxylase # Organism: Staphylococcus aureus N315 # 1 416 1 394 399 322 44.0 8e-88 MAHILLGVTGSIAAFKACHLASDWSKQGHEVRVVMTAAAQEFVTPLTFSSLTHTPTRTSM FAAGHRPGATADVTPGPDGPLQISHVADAKWADLLAVAPASADIIAKIACGIADDQLTST ILAYDKGPKILCPAMNVHMYENAVTQRNLNTCRELGWTIVEPESGMLACGDAGKGRMEEP ARIETAVKALLLANRPDGELPLKGLAVLVTAGPTQEPLDPVRFLTNHSTGKMGYALAEQA RDLGAQVTLVSGPVALDAPYGVDVVDVTTARDMFDAVTNRFADTDITVMAAAVGDFRPVE QARDKIKKNGRSSIELELTSNPDILAWAGEHKRPDQTLCGFAMETRDLEANAAKKLNGKH CDMLVANNLRTPGAGFAADTNVVTVLTPGETADRPNIERWSKMGKDALAKRILVKLAAMR ADGERR >gi|148337405|gb|DS264454.1| GENE 627 689215 - 690870 2453 551 aa, chain + ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 87 551 39 498 503 234 33.0 5e-61 MSSPTGAHGEADATKQENEQQPQSTASTDATLNARAKSSNGAKSQGPKKWLIALIAIIAA VAVIVAIAVTCGKNDDANTSGVTKADTVTIGLKLAPVSLDIRHQSGSAIEQVLIGNVYEA LLSRDSDNKVQPGLAKSWDISKDGKTYTFHLNQNMTFSNGDKLDADDVAWSINQLKEKQY YNANQVASLDKAEAVDANTVKLTLSTPDSNLLWYLTGRPGLVFDKNAKYNAKTEAVGSGP YTVESFDSASKMVLKANAKYWGTAHKPATQNVVIRFLTDDNAAVNALKSGDVDVLSPVNA TLAKSLDASTYTVSAADGSDKFVLAFNCTNAKLKDKRVRQAIRYAINHKEIIASRGNVDY ALGGPVPSVDPGYEDLTGLYPYNVDKAKELMKEAGYTTDKPLRLTLTYANTYGTELGDQL KSQLAKIGIDLKIDYVEFSTWLQNVHANGDYELSLVDHAESHDFYKWTTPDYYYHYDGKQ AQELYAKALEATDEADSAKYLKQAAKAVSEDAPADWLFGYRVTVAVDKHVQGFPSKLSQT VLPLWRISKNK >gi|148337405|gb|DS264454.1| GENE 628 690886 - 691866 1215 326 aa, chain + ## HITS:1 COG:mll7246 KEGG:ns NR:ns ## COG: mll7246 COG0601 # Protein_GI_number: 13476037 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mesorhizobium loti # 1 315 1 315 319 182 39.0 6e-46 MRFVGKRLALFVAALVGLSALVFVMLRVLPGDVAAVIAGTNATPERIASLRAEFGLDKPL VAQYGDWMAGLLHGDLGVSAVGGRPVARQVAMRAAVTFPLIVLSLLIALAIGLPLGCAAV LTRNPRLRGLFHGIAIVGGAVPALWGGLLLILLFSRGRGLLGLLPAQGFPDTGWATPGKA LSCLLLPALTTGITAGASIMRYTRAAVGDMASSQAVDMAMACGMTRKQAVLRVALRLATA QLVSVVGLTFAQMITGVMVVENLFALPGLGAMLVTDVGNRDLVAVQSELFLLAAFFLLLG LVVDMTHRALDPRLKASGVVSGKVNA >gi|148337405|gb|DS264454.1| GENE 629 691944 - 692801 820 285 aa, chain + ## HITS:1 COG:BMEII0286 KEGG:ns NR:ns ## COG: BMEII0286 COG1173 # Protein_GI_number: 17988631 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Brucella melitensis # 31 275 14 258 264 139 34.0 6e-33 MSTTGAVVSSIWAKASGRYATIVIGLWLLTAAVSLVWTPYSLLDTNGFNAWASPSAAHPL GTDGTGADVLSWLMAGSRTNLMIAVLTVVVAAAIGLLLVAAMVSRSGALASTSVVVADAL ISIPTVLIALILSVPFGASAAVVIAACGCAYGLNLARILRPSALLAARSAYVESALWSGA SSVSVFFTHIVPNTLPVLCVQLSMSAGTSLLAEAGLTYLGVGVGAGVPSWGHSLSTSVKF ISVYPMAVLWPGLVVTMVVVALNLFGDALRDAIDPLTNPALREAA >gi|148337405|gb|DS264454.1| GENE 630 692798 - 693628 385 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 18 241 38 260 329 152 39 3e-35 MSAVIRHLNIAINGKPIVDDVDLDIADGERVGLVGSSGSGKSMIARAMMGLLPATAQVTG SVELGGTQIVGASDAAVADLRGRYVGMVFQNPSAALNPVMTVAQQVGLPLYLHYDLSLTE RSERVTAMLAKVGLGEDVLAKYPHELSGGQRQRVGIATALVTSPRLIIADEPTTALDSIT QRQIVDLLTSLVDESGASMLFITHDFAVLNRATTRCYVLENGRIEESGDTTALLDHPHTD AGHRLVQSACALSLHAGQDVGQKPVRNPMHKEVDHD >gi|148337405|gb|DS264454.1| GENE 631 693621 - 694397 264 258 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 28 258 27 264 563 106 32 3e-21 MTDTDEDMVLCGRGLDKWYGAKHERRQVLFGVDVDVRAGECLAVIGGSGSGKTTLTRVLL GLESADGGSVEYCGEPVRGDVARKLRMQSGLVFQSPFDSLDPRWRIGRSIGEPLRMHHPD WPRERVAERVAEVLEMVSLDPETYLNRFPVDLSGGQAQRAAIARAIVDGPKVLLADEPMS AIDVAARVRILESFEAIRNAEPDMAIIMVSHDLGVVQHIADRILVLHDGRAVEVGPTDQV LGHPRDEYTKRLVEAASL >gi|148337405|gb|DS264454.1| GENE 632 694833 - 695843 563 336 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 305 1 299 308 221 40 6e-56 MTIHNSLSELIGNTPLVKLNHVTDGIKATIAVKVEYLNPGGSSKDRIAERIIDAAERSGE LKPGGVIVEPTSGNTGVGLALVALQRGYRTIFTLPDKVSEAKRAVLRAYGAEVVVTPTDA GPDDPRSYYQVAERLAKTIPGAYRPNQYDNPNGPESHYRSTGPEIWEATDHKVTHFVAGI GTGGTISGTGHYLKDVSNGAVQVIGADPEGSIYSDPNDVHQYQIEGVGEDFYPNAFDRSL PDEIVQVTDAEAFEMTRRLANEEGLLVGGSSGMAVFSALKYAREHDLDENQLVVVLMPDS GRSYMEKIFNDDWMRANGFADVVERTTKPSLAEQYL >gi|148337405|gb|DS264454.1| GENE 633 695946 - 697127 1814 393 aa, chain + ## HITS:1 COG:MT1110 KEGG:ns NR:ns ## COG: MT1110 COG0626 # Protein_GI_number: 15840515 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Mycobacterium tuberculosis CDC1551 # 16 390 15 387 388 432 60.0 1e-121 MTISTNTEALNATALATRAIHAGQEPDPTTGAVVTPIYMTSTFKQDGVGGLRNGYDYSRS INPTRNSFDEQLAAVEGAKYALSFSSGLAAIDVLLRSTLKPGDNILLGNDVYGGTYRLLS KVFVPWGIGLDVVDITDTAAVSAALAKKQYAYIWVETPSNPLLNITDIAATAAVAHAHGT KVVVDNTFASPVLQHPLADGADVVVYSTTKYIGGHSDVVGGAVALNDKETRDAVAFLQNA AGAVPSPFDSWLDIRGLKTLDLRVKQHSRNAMKVAQWLETRPEVERVWYPGLESHPGHDI AARQMHGGFGGMISIQIAAGFEAAKKFAGATEVFTLAESLGGVESLIEHPGAMTHASVAG TTLEVPANLIRLSVGLEDADDLIADLEQAFRQI >gi|148337405|gb|DS264454.1| GENE 634 697164 - 699188 2082 674 aa, chain + ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 34 668 1 587 714 494 40.0 1e-139 MGKTRAGRFALHGQRMALLHLETMTQAVDSADSVDPRALEALNRYFGYDSFRPGQSGIVS AILTGHDVLGVMPTGAGKSICYQIPAAILPGVAIVISPLISLMRDQVDALNDVGLPAAFI NTTQTPDEQDLVFAQALSGQIKLLYVAPERLETERFRNFAVRVPISLVAVDEAHCVSQWG QDFRSSYLGIGEFIAGLPTRPTVAAFTATATERVRRDIVSILGLHTPSITVTGFDRPNLY FDVISMPRKDKASWVASYIASHPDESGIVYCATRKETEALAESLNSAVAELRAAGGADVS DIGTIAVAYHGGMSADAREKAQRDFVTDHVPVVVATNAFGMGIDKSNVRFVIHHNMPESI EAYYQEAGRAGRDGEPSRCTLLWNESDIVTRRRLLDSDYENERLTPEEQEAVRASKRRLL DAMVGYCRTTDCLHAYMTRYFGETAGAAAKTDGKCVGGCANCEHTFETIDVTDIARAVSR CVHDVNQHVGSGKIVKVLRGSKAQNLSYLNPESLPSFGMLDEVPEARIRDVLSQMATDGF LTIAEGRLPIVGFGPRAAETVAPEFHYDIKKIKRADARARRTPDVSTPAVGSYVPDDGDE ALFQKLRALRLDIARELGKPPYIVFSDKTLRDMVRVKPITDDQFLAVNGVGESKLKQYGE RFMAAIREDSGDEA >gi|148337405|gb|DS264454.1| GENE 635 699283 - 699768 708 161 aa, chain + ## HITS:1 COG:SP0340 KEGG:ns NR:ns ## COG: SP0340 COG1854 # Protein_GI_number: 15900270 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pneumoniae TIGR4 # 7 161 6 160 160 234 67.0 7e-62 MAEDKPVVESFQLDHTKVKAPYVRYIDTETGPHGDVISNYDLRLVQPNENAIPTGGLHTI EHTIAVLLRERIPGYIDCSPFGCRTGFHLLTWGEHSTEDVARALKESLEFIAYEATWDDV PATTIESCGNYRDHSLFTAKEWCKDILAKGISSDPFERRLV >gi|148337405|gb|DS264454.1| GENE 636 699855 - 700382 648 175 aa, chain + ## HITS:1 COG:L36177 KEGG:ns NR:ns ## COG: L36177 COG0454 # Protein_GI_number: 15674159 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 11 171 5 164 169 94 37.0 8e-20 MSETTSERRFRRATMDDLPVMLKIYQHARELMAANGNPTQWGNTFPREEVILDDIRQQRT MLLVDEADGKERVLAQFALCTGEDPTYAHIDGAWLDDDSYVTIHRIASSGIVKGAAKDCI NWCIEHYGNVRADTHPNNKAMQHVLESNGFARCGLIQLLDRPTDTTRIAYQRHEW >gi|148337405|gb|DS264454.1| GENE 637 700463 - 701890 2201 475 aa, chain - ## HITS:1 COG:RSc1588 KEGG:ns NR:ns ## COG: RSc1588 COG0531 # Protein_GI_number: 17546307 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Ralstonia solanacearum # 1 472 1 464 476 467 53.0 1e-131 MDLFRKKSVDQLVSESTPLKRTLKTFDLTMLGIGAIIGTGIFVLTGKGALTAGPALCVSF LLAAVCCGFAGLCYAEFAAMAPVSGSAYSYAYLAFGELIAFVIGWDLILEYALQAATVSA GWSGYFNKLLEGFGLHLPVELTAAYGTTPGVTTYFNLPGFVIVLIITWVLSIGINQTKKT NDIMVMIKLAIIVLFIVCTVWYINPANWKPFSPYGIYTFQPGSTQPYGIVPAASIVFFSF IGFDAVSSSAEETINPNKTLPRGILISLAVSTVLYIIMTLIMTGVVPYKEFAKFIDAPVA GVILETGLNWLAFIVNLGALIGMTTVMLVQLYGQSRICYAMSRDGLFPKFFGEVHPKYRT PFKGTWFFGILTAIAGGFININVLFELVNIGTLSAFIIVSAGILWMRKTQPDAHRGFRAP GVPFTPICAIIFCLILIFGLNWETWVRFAVWFALGLVVYFTYSRKHSQLNEPGLF >gi|148337405|gb|DS264454.1| GENE 638 702116 - 703483 1922 455 aa, chain + ## HITS:1 COG:MT3532 KEGG:ns NR:ns ## COG: MT3532 COG0787 # Protein_GI_number: 15843019 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 32 439 36 407 408 246 40.0 8e-65 MGAMTLSATREWDFSSEQGKANYKAAQRRYPAQAIVDLAALRDNMRHLVSVVGGPHSGTA VMGIVKADAYGHGLVPAALAALAGGATWLGTAQSHEALLLRKAGIGPDRCHILTWVYSGA EVPFDELVDNDIDISVGSLAGIDGVAAAARRLGKTARVHVKVDSGFGRNGFTPAGFDAAL AKLVPLAKEGVLHIVGQWSHLAVADAPDVPEFVASTDMQVETFKDFTRRMEAAGIPPEIR HLANTAATLSRPEIHFELTRPGIGLYGYEADPAMGTPSTYSLKPAMTLQAQLGTVKDVEA GHGISYGRTYLTPSDTSTAIVPLGYADGIHRSASGFDMEGAKHVTKPGGPVRVMTSEGPR LYRVSGRVCMDQFILDLHGSAAELGIHEGDNVELFGPGRGEDYAEPTADDWGRAADTISY EIFTCLRNRIPRLYEHATDVLSAEDLAKLDPASIL >gi|148337405|gb|DS264454.1| GENE 639 703534 - 704793 1387 419 aa, chain + ## HITS:1 COG:Cgl2221 KEGG:ns NR:ns ## COG: Cgl2221 COG0232 # Protein_GI_number: 19553471 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Corynebacterium glutamicum # 6 409 4 407 424 292 44.0 9e-79 MTSEGYSAFDEERWAPEPPKSSSRTAFQRDRARLIHSSALRRLGAKTQILVAGTDDFART RLTHTLEVAQIGRQIGTSLGCDPDVVDCACLAHDLGHPPFGHNGERALAEIASNIGGFEG NAQTLRLLTRLEPKILFPDGRSAGVNLTRAALDAAVKYPWTLAEAAAHPKGERSAKFCVY PDDTDVFAWLKQHAPDTTRRPVECQVMDLSDDIAYSVHDVEDAIATGAFNPGELHENGVI DAVVEDARAWYGPQWDADKLVDAFARMHRRDTFPGYFDGSRRALAALKNMTSDLIGRFAG SVEHATRDTYGNEPLTRYNGDLVIPEETSYEIVVLKGIAVHFVMEPGEREPMHGEEQRIV KDLVDVFMADNPKPSSALENVFLDDWRETGGDDERLRVAIDQVASLTDTSALTLHSLLC >gi|148337405|gb|DS264454.1| GENE 640 705019 - 707106 2289 695 aa, chain + ## HITS:1 COG:Cgl2216 KEGG:ns NR:ns ## COG: Cgl2216 COG0358 # Protein_GI_number: 19553466 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Corynebacterium glutamicum # 3 690 6 631 633 413 36.0 1e-115 MPGMIKKEDIEKVRATADLYDIVSATVTLKPSGTGTYVGLCPFHDEKTPSFSVRPALGVW HCFGCGLGGDVFGYVEHQENIDFRDAVELLADKYHIELHYDKADNVPAHTGSKRARLLEA NEAAQEYFVSQLMTKEALAARKLLDGRNFSQADCQRFGCGYAPQGWDNLVRHLAGKGFTQ QEMLDAGLARQGQRGVYDYFRGRVTWPIRDSTGRTLGFGARKLYEDDTINAKYINTPDTQ LYRKTQVLYGIDLAKSAIVKKRQAVIVEGYTDVMAMHLAGIDTAVATCGTAFGAEHAKII RRLIADDSLGAVQLVGPLKVEGQALSSRVVFTFDGDAAGQKAAIHAFGLDAAFSTQAFVA VAEDNLDPCDLRIKRGNEAVRALIANARPLYDFVIDSAIDRFDTTYATGQMGAVKAVAPL IAQIRDRSLLDLYSRKAVRRIGVDLDIMQREVAYQRRKLNVRDEDAYAPKRRFQNNAGPS AEPAYAERGANPYANPAARKALEHRDAAEQSYYRIDDAVFICEQQFMATLIQVPLAVDPT MFASLTLSSFMTPVFRTLFQAVAAAGGLPGEDVPQGLWMHNLTKAGGPMLDSVINELAVM PLPLPPSEADTNRNAGESQEQSAQLRKPTQEERRYASELIVRLLDTGIMRKIGAAQRRMA QLPDGAEKIELLGQITKLETLRKDLQSRVFGNNVA >gi|148337405|gb|DS264454.1| GENE 641 707402 - 708595 1488 397 aa, chain + ## HITS:1 COG:RSp0802 KEGG:ns NR:ns ## COG: RSp0802 COG0471 # Protein_GI_number: 17549023 # Func_class: P Inorganic ion transport and metabolism # Function: Di- and tricarboxylate transporters # Organism: Ralstonia solanacearum # 34 361 72 373 408 110 27.0 5e-24 MRRLVVKVLKNETILVVASILALISCFIVPPDKEYAGYIHASTISQLICLMLVVCGFQRI GVFRIIGSRLLHHVKTARGLVLTLIALPFFSGMLITNDVALVTFVPFAIAVLTMAHMEEH AVLVGTLMTIGANVGSMLTPIGNAHNLYLKALTGMPTSEMIGIMAPYSATAAVLLIIITC VIFGSKSVSEFSAIDGSDIEQNVLAPHSDRPQPDEIRVTGYGAGYGGWRTIVYTALFVVC LLAVSDFIPLWLMCVIVFVAFLLCDRRVFRNVDWGLPLTFCMFFIFIGNMKRVPEFYELA ASLVGAHPLEVAVVSSQFISNVPTTLLLSGFCDQWRELIIGTNLGGLGTLIASMASLIGY KNVTRAYPDKKGRYLAVYTAVNVLFVIVLVGLSWIIE >gi|148337405|gb|DS264454.1| GENE 642 708784 - 709773 1159 329 aa, chain + ## HITS:1 COG:Cgl1047 KEGG:ns NR:ns ## COG: Cgl1047 COG3238 # Protein_GI_number: 19552297 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 326 1 304 307 197 39.0 2e-50 MLQGLLGIFSGLITPVQTAVNTRLGRSIGSPLRASLVSFSVGLIAMLTLTLLLGPYPLIP ATAANGPWWMWFAGVFGVTFLTGNVLLLPKLGSLKTVIMPVTGQIVMGLLIDAFGWFGTT AQPISPLRIAGAAITLVGFLLAVAGPNLRLRPAIDRPAGGSENSGDSEKSETDGKAVHVP GSATVLWSCAGIAFGMCSAVQTALLGKLGVALGSPVKASLASFVVGLISLAIVVAFVDRT YSLGDALKKGNPWWMWAGGLLGATLVMCNAYLSAHIGTGMTVMLVLLGQVGGGLLVDRFG LLGVPRKPVAGIQYVGVLVAIVGIVLKAM >gi|148337405|gb|DS264454.1| GENE 643 709990 - 711978 2479 662 aa, chain + ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 1 652 1 640 644 518 40.0 1e-146 MKRIVAGILAHVDAGKTTLSEALLYATGQVRKLGRVDHGDAFLDTDAMERQRGITIFTEP AVIATPDLTITLLDTPGHVDFSAETERTLAVLDYAILVISGADGIQGHTETLWRLLNRYQ VPTFVFVNKMDAPGADKTQLLAQLKKRFSDGCVDFTEPIDGERMEEIAMQNETAMDAYLD TETVPDETIRAMIARRELFPCYFGSALKMDGIEQFVAGFERFAQEPQYNGEFGARIYKVS HDAQGNRLTWLKVTGGELKAKMMLSGTAHAGDADAVAEDGQWHEKADQVRVYSGAKSTTV DTVPAGTICAVTGLTQTFPGEGLGMERDAGSPVLQPVLTYTLEPGECDIHKCLVALRELE DEDPLLHVVWQSRLEEVHLQLMGAVQLEIIQQIMHDRFGLDVTFGPGSILYKETIAAPVE GVGHFEPLRHYAETHVLLEPLPQGAGMAYATVCSEDVLDRNWQRLIMQHFQEREHLGVLT GSPITDMRITLLTGRAHLKHTEGGDFRQATYRAIRQGLMEAKKKGDCRLLEPWYGFRLEV PQDMVGHAMADIQRMSGTFDTPTGDGEYMVLNGTAPVSEMRDYAMDVNAYTHGRGHLSCV FAGYQPCHNADEVIENMAYDPESDLENTPDSVFCAHGAGYPVKWYKVPEFMHLDYTWDGM RE >gi|148337405|gb|DS264454.1| GENE 644 712477 - 713142 705 221 aa, chain - ## HITS:1 COG:CAP0111 KEGG:ns NR:ns ## COG: CAP0111 COG0454 # Protein_GI_number: 15004814 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 3 171 5 160 162 144 40.0 1e-34 MLIRHATMEDLDAIEAVEAACFPPAEAASNESLTARVAAYPDHFWLLVNTDDDDTPFPSR VEDGTLVGFVDGMATNEPNLADAMYDDADMHDEHGDWQMIFGVDVAPVYQHRGCASYLLR QVILDAAQAGRKGLVLTCKERLVDFYARLGFVDEGLSESTHGNVVWHQMRLALTHAVGTG NPTANGSAKTAERTNDADTTAMSGVDHDAETLEFPQVEPTA >gi|148337405|gb|DS264454.1| GENE 645 713392 - 714048 1110 218 aa, chain + ## HITS:1 COG:SP0711 KEGG:ns NR:ns ## COG: SP0711 COG0765 # Protein_GI_number: 15900609 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 22 215 1 194 206 194 56.0 1e-49 MFDWTFISHYAPFFVSGAEMTLFISVFGIILAIVVGLVCAGIEIARIPVLRQVVRVYIEL SRNTPLLVQLYFLYFGLPKLGLVWSAELCAIVGLGFLGGSYMAEAMRGGLETIPEVQRES AYVLGLSKWQTLSRVVIPQAISTSIPGVVANVIFLIKESSVVSAIALADVMYMAKDLIGM YYDTYESLFLLIVAYLVILLPISLFGTWLERRFDYERR >gi|148337405|gb|DS264454.1| GENE 646 714035 - 714709 809 224 aa, chain + ## HITS:1 COG:SP0710 KEGG:ns NR:ns ## COG: SP0710 COG0765 # Protein_GI_number: 15900608 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 2 223 4 225 225 230 52.0 2e-60 MSGAEILLEPGVIPRLLQGLWVTVWIAGVSVALSVPVGLIVGWLMTMKNPVVRVLTRIYL DFIRIMPQLALLFIAFYGFAQAWNWNLDATGACVFVFVLWGGAELGDLVRGALESIPKAQ YESSYVLGLSGWQTFTKVILPQALRRLLPASVNLATRIVKTTSLAVLLGVVEVIKVGQQI IDANRFQYPTGTLWIYGTIFFMYFIVCWPLSIVARRLEKRWKHD >gi|148337405|gb|DS264454.1| GENE 647 714702 - 715580 463 292 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 22 269 2 240 245 182 41 2e-44 MTEQAEQVTQTAQNSGKSQTSLEIRHLVKRYANADKPVLDDISFDVPHGKVFVIVGPSGS GKSTLLRTIAGLEPIQGGTIALNGEIIETGKPGTESAGRSKRGSELRTRVGMVFQSYDLF PNKTVLGNITLAPTLVQKRDKAEVEKEAIALLERVGLADRKDAWPHELSGGQRQRVAICR ALILHPEVLLFDEVTAALDPEMVREVLDVMLELADSGQTMLIVTHEMQFARAIADQVIML EDGGIVEQSDDAEAFFTNPKTERAKRFLHTFEFDRHRRPAETPTEPTGTSAE >gi|148337405|gb|DS264454.1| GENE 648 715625 - 716530 1559 301 aa, chain + ## HITS:1 COG:Cj0982c KEGG:ns NR:ns ## COG: Cj0982c COG0834 # Protein_GI_number: 15792309 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Campylobacter jejuni # 42 301 18 279 279 269 54.0 6e-72 MTASIINKTIKSIVAASAALIMAASVAACGPNAATPSEENNASNGGATTSKVTARSLDEI KKSGVLKVAVFSDKAPFGYIDKDGKNAGYDIVFAERLAKDLGVKVKYTSVDPAARVDVLT SNKVDITLANFTVTDERKEKVDFAKPYMKVALGVVSPENAEITDVSQLKGKTLIIAKGTT AESYFEKNEPDVKLQKYDQYADAYNALLDGRGDAFSTDNTEVLAWAKTNKGFKVGITKLG DEDTIAPAVQKGNKELLNWINDEIVKLGKENFFHKDYEETLKPVYGSDVDPNDIVVEGGE L >gi|148337405|gb|DS264454.1| GENE 649 716865 - 718988 1590 707 aa, chain + ## HITS:1 COG:SP1898 KEGG:ns NR:ns ## COG: SP1898 COG3345 # Protein_GI_number: 15901725 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 226 607 244 625 720 104 24.0 8e-22 MSQTLTWNAGPVSMAFEYADGQPVVMRALEINGVSVQFPESTPIAEVMTTDTGHMISCNK LTHTVIGRELRYSSHQTNTTGYRSELKIVLEDEDRDLEVTVRYSVDERSPMVQTDVTVTN MGLEPVLLDSVTSWSSTFGIPANADEGTESGLEHWDLLEGRFDWLAEGRWSRKSLRELLP AIGQELTNVDPRQSHQVVSTGTWSTGTNVPLAILESKAMKLAWLFQIEHNGAWRWDVQDN TADGCVALSGPTNENHAWFKELHLGESFTTVPASFTIAHDFDGVIANVTDYRREVRSPHV DNVEPSVVFNDYMNTIYGDPTTEKELPLIEAAGKAGIEIFVIDCGWYDDTGNWWPSVGEW MPSKTRFPGEKGIVEVIDAIKDAGMIPGIWIEPEVIGVKSPMAQKLPDSAFFQRHGKRVV EQERYLLDLRDPAARRHLDSVIDRLVGEYGIGYFKFDYNVSPGAGTDYDADAPGAGLLGH NRAYSDWIDGLRERYPDVILENCSSGGMREDFAQTSRFQVQSTSDQQDFRLYPVIAAASP MMVLPEQAASWAYPQSDMGAEETAFNINTTFLGRFFLSGYLNRMNERQLAWVQEGVNAYK KHVQPVIGESKPFWPMGLPGWNDKVLALGLDAGDRALATVWSRDSEGGDVRLHLDRWAGR AGEVSAVYPVDGYAQWPVHWDAASGELVVTVPSDGGYVSRTFEVNFN >gi|148337405|gb|DS264454.1| GENE 650 719073 - 720074 704 333 aa, chain - ## HITS:1 COG:mlr2242 KEGG:ns NR:ns ## COG: mlr2242 COG1609 # Protein_GI_number: 13472066 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 7 330 1 324 331 213 38.0 3e-55 MTKRITLDDIAAAAHVSKATVSKALNDTGQLSAHTRRLILKTADELGYVKTANVQTPRCK TGLIGLVTSDLEGRFSNPALIGAENTLGSTNHAVLLTNSRGDPKLERAHIDQLAARRVDG LLMLGGETDSRPPLKPNTALGIPIVYAYAPSNNPEDCSVTCDNVAAGAMAIDHLLLRGRR HIAIVSGPEHYTATKDRLAGARKALKQSGLQLAAPVCYGNWHESWGRTAVQLLLSKGVRI DGIYCLNDMLARGVIETLLAQGIRVPEDIAVIGHDNWQVTATECRVPITSFDNNLQEIGR RAARHLLDAINGNPHHGTTYIGCSLIVRKSTTA >gi|148337405|gb|DS264454.1| GENE 651 720223 - 721473 1605 416 aa, chain + ## HITS:1 COG:BH1864 KEGG:ns NR:ns ## COG: BH1864 COG1653 # Protein_GI_number: 15614427 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 12 388 13 409 461 132 26.0 1e-30 MNTNAKRTVMRLVAGVAAVATLMGTAACGSSNSSSSDDNTLTVSYWDDEMQPIKDFIKAN PDIKVKQIRVPGDDYNTKLNQMIVGGTAPDVMLTQEADYVRFAKNGVTMKLDDKLKDLGI DKSDFQPAVTDIANQVDGYYGFPQGFATEIMYYNKDMFDAAGVAYPTDDWTWDDYTAAAE KLTKADGSQYGSDSPTFNGVWYSLIGAAGDKVVDNGKLSFGNGLKKTLEFQKNLVDNKWQ PQPASGSKVSDMFAAGKAAMTLGGTWLVSTYKDVDFKWDIATIPTAPGAKKYNSLHTSFW AINAKTKHSAAAEKLVKFLMSKEGQKSMSQSLGNTPAFQSMMADGYYKVQGKNGPSNWSS LEASAKEAKLGYTLVASTPTFNLYDQFNAYVLGQTSLSEVTGTQVAKANKEITDAQ >gi|148337405|gb|DS264454.1| GENE 652 721624 - 722529 1009 301 aa, chain + ## HITS:1 COG:YPO1722 KEGG:ns NR:ns ## COG: YPO1722 COG1175 # Protein_GI_number: 16121982 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Yersinia pestis # 23 296 10 279 296 172 37.0 6e-43 MSISKKTAKSSGKMRSDAGAAWGFLSPWIIGFLIFSAFPLAFSFYLSLTKWNLMGDPQFV GLQNYKDMLSGNGELGQTLLATAIFTVINVSVSILFSLLLAILLNFKVRFKGLFQFFYYV PTIMPSVVMAGCLVLMFNPQLGIINYVLKSMGVQNPPNWSGSQTFVWVLVAVASVFTFQT GQQMLVFSAALKDVPQELYEAAALDGAGAWKRFVNVTIPGIAPMMLFNVVSCTVNSFNSA FSLLYPLTGGGPGNATKVIGLLIYDKAFKSFNMGQASALAVILFIIVGVISALQFKLMDR Q >gi|148337405|gb|DS264454.1| GENE 653 722544 - 723392 729 282 aa, chain + ## HITS:1 COG:BH1119 KEGG:ns NR:ns ## COG: BH1119 COG0395 # Protein_GI_number: 15613682 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 8 281 8 281 281 179 36.0 6e-45 MELHTPKYVKVLQYVVMIIMALFMFFPIYWIFVNSLKTITGISAWPPEFFPKDPQWGNYV KVLENPNTILYLRNTLILVVLNTVGTLLTSSIVAYPLARMNFKGRGVVFAIILATMMVPS AALVIPQYLLFRNFGMLDSFWPLILPSFFAQPYNVFLFRQFFVSIPDSIDEAAMLDGCSR WQAFWKVIVPLGKPIFITVGIMSASFWWNELFSPLVYINSEDLKPLTLGVLTSFVETSAG ASKTMWNLQMAFSMLMIIPPALLYICCSKYITEGIKTSGMKD >gi|148337405|gb|DS264454.1| GENE 654 723438 - 725420 2414 660 aa, chain + ## HITS:1 COG:ECs4459 KEGG:ns NR:ns ## COG: ECs4459 COG3533 # Protein_GI_number: 15833713 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 10 660 11 652 656 465 38.0 1e-130 MTNQAQALNVNITSRFWTRYLNMTVENALPYQWRALNDEVPVDVPEGAAWGENGSQFSHS LRNLRIAAGREEGVFSGQPFQDTDVSKWLEAASYALRRKNAGLNVDELEAHVNEAIELFE GAQDEDGYLDTKFELDLPAEKRFKGLRWSHELYTMGHFIEAAVAHYEVTGSKRALGIAER VANCIGHNFGDGEGQVHGPDGHPEIELALARLYEATGERRWLDLAAWFIRVRGTDPEFFD EQDAAGGPQFYTDLHMPLKYFVQDEPILDKQHAEGHAVRLLYLAAAVSKVGRLLNDQKML DTAERLWTNIVKHRMYITGAVGSCQVGESFSFDDDLPNDLVYGETCASVAMLFYGKSLME TKPRGSVADVMEKELFNGVLSGVQLDGTRYFYVNPLEADPAASKGNPTKAHILTRRAGWF DCACCPANLGRLIASLDQYLYTVSNDGKTVYAHQFVANKTEFEDGFTIEQTQAGDEYPWS GDITFHVSNPNGLDKKVAVRIPQWSKDYTLEVNGEAVELPVVDGFVTVDASAADTEIHLV LDMSVRRVRASLRVRADIGKLAVARGPIVFCMEQVDNEGPLWLDGMSADANVSESYEPDL LDGVEVLKVKGSRLESPTDDQYRAVDAPLTEREETLTMIPYYAWCNRAEGQMQVWVRETK >gi|148337405|gb|DS264454.1| GENE 655 725672 - 728902 3764 1076 aa, chain + ## HITS:1 COG:no KEGG:Cthe_2137 NR:ns ## KEGG: Cthe_2137 # Name: not_defined # Def: cellulosome enzyme, dockerin type I # Organism: C.thermocellum # Pathway: not_defined # 55 800 29 727 790 375 32.0 1e-102 MKIRKPLAALLATATMAALAATSGAATALAIENPTVTVHLDQTGCTENTNNTNCQITHGS TGFLYGLTDDGVSSDTTLNGLSLDSNSVLVGKSPDGVQHPNGDVLNTTDQWKRNGGGEIQ VYMKEAYKNFPYVAYGDGGMDGDYVPKLKEMVTKFNTKYPDLKDDIVWIPFNEPDISDAN YYNLTNYNSKYDSVRTKFFEDWNKAVEAIRSVYPQARIGGPNNSAYSDRFYRDFFQNAKE HGTVPDVVTWHELGSGFGSYLSNFQKWKTLEKDVLSDYAPPENTGLKQGQTIKVSINEYA WKDQNGKAIEQVKPGRLLQYVARFEKTGAQGALPYWYPAGDLDWLVTKNNQVTGSYWLYY WYGLMKGDLLKVDLPDENGKPQVLASYNKDSNQTQILLGGSNESSYSTTLNLSALPDKYP NGAHVTIYATDSTAPANLSNVSVNVPAASDGPYVVAEQDLSIANGQASLPLNNLKGDSAY YAVIAPATSQGKVSNSTVEAEYARRNGTAKVTYGNASGYSGTGYVEGADATASSDFFVDS KKNGYNEVMLRYSAPKADGQNAKRTVTLKINPNENSARNDAQELTLQLPETKDANTWQTA KVRIYMPLGLNQITVEGYGTQGMLIDSVSTASADDSSVTRYEAEDSSNTFNGSAKASTDN NASNGRIVGNVGNGANNWFQFNKVTVPEDGNYTLTIGYAQWEYTANNTWQIVNRWADMSV NGETSKHLVFANTRGWSNFWTTSVRVNLKKGENTIRFGNANTGTASESGKASGWAPNFDY IQVAPTVDSSSVKYTTADGSEIKSITSLTAKANGLKDGVLTLTEGDSVDVDVNIKPINAT DATLVWASSDSSVATAEEQEDADGIATQSAKLVDSRTIHALKAGETTFTVTPAVNAENGV SATFKVIVTAKEPEPVSADKSKLQAAVDEAGKLDEKDYTADSWKVFTGQLESAKKVLADE NATQDDVDSALKTLKDAQSGLVKADSGSTGGSTSGGSSAGNTGNTGNIGNTGNTGSGGSH DASAASTGAANGNDSANGGQLGLVSTGAGIALVAGVAALLAVAGAVIAVLRRRNAI >gi|148337405|gb|DS264454.1| GENE 656 729216 - 730541 1683 441 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 74 441 56 418 418 104 27.0 3e-22 MQTAQSNSEVLVDPDTLSPETGEPFSRAMTARYLVAFVIFAILNCAAFVLNGNTLMPQHL KDLGYNETEATTALGTITSLTAIVGLLSGYIWGAFSDHTRSRFGKRTPWIFAGSIVAGIG LYLLGSFGDVPSLTASYMLNNLGQGAIQTPMFAILADRVPKSVRGTLSAGLGATALGTPV GQFLSSLFLGQPYQNMGFVVGALMIAASGIIPLLILPRERSSKNDGDGKSGAEAAKEALE NLLPPKLKGAHDFYKACGGRLLMMASYAMISQYTLYIFENYVGLTVQEAAKAMGTLSAVT FVVSLIGLAVSGPLSDKIKARKMPIAIACVLFIIGTLCPVAFRSVNGVLLYAAFAGLGYG VYIAVDGALNVDVIPEEAQHNRTGGKYIGFGNLANTCGQVLAPATTAMLVAVTGTYYSAF IVSALCALGGVLLILWIKNVK >gi|148337405|gb|DS264454.1| GENE 657 730819 - 731841 1252 340 aa, chain + ## HITS:1 COG:STM2573 KEGG:ns NR:ns ## COG: STM2573 COG1893 # Protein_GI_number: 16765893 # Func_class: H Coenzyme transport and metabolism # Function: Ketopantoate reductase # Organism: Salmonella typhimurium LT2 # 1 314 1 303 305 152 32.0 7e-37 MKYAVIGAGGMGIQYGVLLQEFAHKDVDFIDTWKPNVEKIREQGGAYVSQDGEDRHLVPI NVYYPEEYAGQPDVWIVFLKQMQLDGVLKRCAHLFNEKQIVFSAMNGYGHFEKLNEYFSK DRIYGGTALIGAYVYGPGDFNFTGGAHAKAMNLCAYADDVTDEVRKHEQALYEDFATATL NPTIVDNFIGMCMAKIVFNSVLNTLCTMYQIRFGEFHAHPDARWLTEQLVDEAYSAAEAA GYQLLGTRETEVETILHTAGVAHPLHYPSMYQDLTKGRPTEVDYINGYIAKVGREHGYEC KLHEFLTREVHLAEQAFAIHNPGIVAQAKADVEASKPVTE >gi|148337405|gb|DS264454.1| GENE 658 731881 - 732756 1341 291 aa, chain + ## HITS:1 COG:STM0510 KEGG:ns NR:ns ## COG: STM0510 COG1464 # Protein_GI_number: 16763890 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Salmonella typhimurium LT2 # 20 288 9 269 276 201 44.0 1e-51 MTITIFKKPNGIKRIAAAVLAAATLISVAACGSSNSASASNSLNTTKGKTTTITVGVCAG PYGDMVDKVIAPLLKDDGFKLKTKLFNDYVQPNKALASGSIQANLFQHGNYLKKFTADNN LDLTSLGQTPTLGLGIYSNKYKSIDDIEDGATVAIANDGSNLARSLGVLQQQGLVTLKGE VDATKATVNDIASNPKNLKIKTIDAAQLARSLNTVDVALVPGNYSWAADLKPADALAMEK QDDGVIEVFVVRTQDVDSDFGKAVKKLLASQKFKDAIAKSEFKDFGKPTTW >gi|148337405|gb|DS264454.1| GENE 659 732892 - 733953 1369 353 aa, chain + ## HITS:1 COG:lin0312 KEGG:ns NR:ns ## COG: lin0312 COG1135 # Protein_GI_number: 16799389 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Listeria innocua # 3 327 1 326 338 305 51.0 1e-82 MSVIELNDVSVTFHEGGRTVEAVKHVNISVEKGEIFGIVGFSGAGKSTLVRTINLLERPT GGHVVIEGNDITALKGSQLSDLRKKIGFIFQGFNLITNVTVGKNIEFALKAGGYPKAQWP ERVRELLALVGLENKIDSYPSSLSGGQKQRVSIARALANKPEILLCDEATSALDLETTEG ILALLQRINRELGITIVFITHQLDVAKQIFDRVAVMENGVVVEQGNTFDVFSAPKHPTTK ALVERYLGIAVPPQLVPSLPAGTIVELRYKGDAALEPLISQVAQDYGVSIDVLHANVEYF GSQAIGILIVLVSGAGEPLLQALNTLRTHVFSYRELDRGQLVVAAEAADNQEA >gi|148337405|gb|DS264454.1| GENE 660 733959 - 734618 596 219 aa, chain + ## HITS:1 COG:RSc0921 KEGG:ns NR:ns ## COG: RSc0921 COG2011 # Protein_GI_number: 17545640 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Ralstonia solanacearum # 8 219 5 216 217 147 46.0 1e-35 MEETLEILQDNLGQALIDTAYMVVVSAIIGVVLGTLVALLLYLTENRLFTPNHALNVIVG FIVNAIRSLPFLILMVVLIPVAQLILGDPYTPTGGAISLSIAAVPFFARIAESAFSEVDP GLLEAAISTGATTRQIIVDAVFPQALPSFIRGVVLTIISLIGYSAMVGTIGAGGIGDMAI QYGYNRYETGVLVVIVIILIVIVQIIQWVGDWFARKVTH >gi|148337405|gb|DS264454.1| GENE 661 734682 - 735860 924 392 aa, chain + ## HITS:1 COG:BS_ykrV KEGG:ns NR:ns ## COG: BS_ykrV COG0436 # Protein_GI_number: 16078422 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus subtilis # 13 390 8 386 398 279 40.0 8e-75 MTSYVSPVAFTTVAQSIPPNVFADMDRKVAAAVAGGADVIDLAKGNPDAFPADFIREVAK KAVDDPANARYSPFDGKPSFLRAAEQWYRNTYGVEVDWKTQLFAVEGAVDGLAALFAVLV SPGDAVAYADPYYPSYHCMTVMSRAEEILLPSLPERGFLPDLDAVPAQVWDRVKVLVLNY PNNPTGAQAPREFLQHAVDLAHEYHFAIVQDFAYAGLGVDAQQISILSLPGAFDVAVEVC SLSKMYAMAGWRAGFIAGNDDIVSHVKQYHYQMGSMVTSSIQDAGTAALLSDQSCVAELA ERYAFRREIVAGGLREAGLDVFDSDGGIYAWVRAPEDQTGEQFADTLLERAAVAALPGTC FGKVGKDYVRFSLLKSEDQLREAVRRVAAVLA >gi|148337405|gb|DS264454.1| GENE 662 736088 - 737323 1495 411 aa, chain + ## HITS:1 COG:CAC0391 KEGG:ns NR:ns ## COG: CAC0391 COG0626 # Protein_GI_number: 15893682 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Clostridium acetobutylicum # 3 391 2 377 377 345 45.0 7e-95 MTRFNTQLVHGLPVNDNNTGAVNPPIYNSSTYAFESVGTMPRWDYARSGNPTREFLEKQI AQLEHGTRGFAFGSGLAAIHAVLSIFQPGDRIIVGKNIYGGTYSLFHEYFERWGVIVEEV DTTDYKALDAAVSGESAKGNAHGCPAKAVYFEVLTNPLLQVNNVTAIAGIVHRHGAIAIV DNTFVTPYLQQPLDQGADIVIHSATKYLAGHSEVNAGLVVVKDDELGKRVYFAQNRLGGV LAPNECDSVRRGIQTLALRMDRQQENARAISSYLLLHPLVKSVHYPGLPGHEYELASNGL KGGGAVLSFEVVPGVDPADVLDNLHIFRLAVSLGAVESLAELPCRMTHFELPREERLKVG ITDELVRLAVGVEDKQDLIEDLGQAFDIAYEHYLNRHAGESLFTFAQHVYA >gi|148337405|gb|DS264454.1| GENE 663 737559 - 738515 1266 318 aa, chain + ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 2 293 4 295 296 236 44.0 5e-62 MPFLVALLVIALIIAFLFLSTLFIVPQQQAYIIERFGKFNKVQFAGIHIRIPFVDRIAMK TNMRVNQLNVQLETKTLDNVFVTVVASTQFRVNPENVATAYYELRDPAGQLRSYMEDALR SAIPALSLDDAFARKDDVAFDVQKTVGNEMSRFGFTVVKTLITAIDPSPQVKNAMDSINA AQREKEATRQRAEAQRIQIETQATAEAEKTRLQGEGQANYRREIANGIVDQIKSLQAVGM NIGDVNNVVLFNQYLDVLRSLSESNNSKTVVLPASTPGGYQDMYSQITQAMVTANETAER SAYTPKPSHTAAPSVPRI >gi|148337405|gb|DS264454.1| GENE 664 738398 - 738694 129 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRCASWYGDAPIRDPSFHRFRILRHIHAAPRWKEGFVSSLAAYPAIGACGQRRHSINIR QIRGTDGAAVWDGFGVYALRSAVSLAVTIACVIWLYIS >gi|148337405|gb|DS264454.1| GENE 665 738712 - 739143 628 143 aa, chain - ## HITS:1 COG:no KEGG:BAD_0509 NR:ns ## KEGG: BAD_0509 # Name: not_defined # Def: transposase # Organism: B.adolescentis # Pathway: not_defined # 1 142 12 153 154 234 86.0 7e-61 MKRRFTQAEVYYLNTLPAVERASMDRITYSRDFQVRCMAQYLRGNGPTSIFASAGLNPKI VGSKRIERAIARWKADPQIMLEAQSFANEAAADQRDLLVISQSMTIAWLEKKVMDLQKQI QSVKQHEAERPSMPAHGALIGLE >gi|148337405|gb|DS264454.1| GENE 666 739435 - 740160 330 241 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 17 236 1 218 245 131 35 6e-29 MPVGSTSNAGKTGRGPIIEVKNLRKEYPVLDETVVALERVNLAIPQGQICCIYGESGSGK STLLNQLAGMEKPTKGGVRIAGVPISRLDERQLAEFRQKHLGFVFQSYNLLPNLNAIENV AMPLMFRGVPKRKREMIARAMLKRVGLGKRMNHYPAQMSGGQQQRVGIARAFAARPQVVF ADEPTGNLDSKTKTEVMDMICSFARDFNQTIVLVTHDDNMAQYADRIVTLLDGRIIGDRL T >gi|148337405|gb|DS264454.1| GENE 667 740212 - 741384 1078 390 aa, chain + ## HITS:1 COG:no KEGG:BAD_0511 NR:ns ## KEGG: BAD_0511 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 390 9 398 398 570 98.0 1e-161 MGNNTRIATLLNGAISLLAVVAITLVCIVPTAFAEDGANPSDAPGAGADNSVEQIAGPVP NIIITNFTYGDGSVAVGSTFNLGFTFQNMGKVAVSNMVVTVDGGENFAISGGTNTFYYDA LNAGAALTQTVPMQTLASAKNGAQGIDISFKYEYVDGAARSSNTSDIKISVPVSQPDRFE LNDPVVPNIVNAGEETTITMDYVNKGKGDVSNVEASVEGDGITATQAKQYVGNVASGASG SIGFAFTADKPGETEAKLTVTYENSDGQPQTKEFPVKINAVEAPVPDDSDTDVDVQDQSM PVWVWIVAAAVALVVVVLTVVLVVRHRRKKAKQVADDDDWDWEPADLGADKQGKSTAMAA DAPTQVIATAGGTSAASVSATSSSTPSVKE >gi|148337405|gb|DS264454.1| GENE 668 741459 - 742898 972 479 aa, chain + ## HITS:1 COG:CAC3584 KEGG:ns NR:ns ## COG: CAC3584 COG0577 # Protein_GI_number: 15896818 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Clostridium acetobutylicum # 209 477 188 440 440 108 29.0 3e-23 MLGVIVGCCSIVLMISIGQGISEQNEQMLKSMGNLNDITVTAAGGSGAYDSSGVGMSSLS SSDMTSSDQQAKLDDAAVQTFRGISGVAAVMPQRSAQSTVDLTAGAGSRYVAQYASVMGT DMTQLEASGYKLVQGRMPRRAGEVLLGKYAAYQFMDKYRSDDDSRRIAPGDYACDENGCK ESEGEKPFFDVLTTKLNLITGADYQSPDDYRKIGSTSMSSTDSGDGDGIASSQNPVVSMP LTVVGVLDAATNNYDAFSSGVVMSLEDMDTLQAKIDGKTNTTSRTKTNYDQVVVHAQNIK DVPGIEAQIKMSGYQTTSFEQTRKEIEKQSRGIQLALGGIGAVSFLVAAIGIANTMIMSV SERTREIGIMKALGCYVKDIRTMFLCEAGAIGLVGGLIACLISALGSLSINLLSFGGFSM ENVGKAIMGGDDVSRISVIPWWLFVVAVLFSILVGILAGLGPANKAVKIPALDAIKNEQ >gi|148337405|gb|DS264454.1| GENE 669 743015 - 744919 1972 634 aa, chain - ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 6 632 3 585 586 509 43.0 1e-144 MTAGILGSIHSPADVHALSSQQLRDLCLEIRSTLLNYGRKHGGHIGSNLGVVELTVALHR VFGSPRDRFVFDVSHQSYVHKMLTGRAEAYLDESRFGEVTGFTNPLESEHDSFVLGHTGT SISLACGLAKTRDMQHTAAGASEIGNVIAIIGDGSLSSAIAFEGLNNAAEQGGNLIIVVN DNEMSIAEDFGGMYGNLARLRASNGTAELNLFKAFGLDYRYVEQGNDVDTLVAALEDLKD IDHPVVLHIHTTKGLGFSDETEAQDGSDGCNQTNPQPHAGQCEANHWQDPDSALGKPLDA RKYYGQMAMASLESRFENEPGLVVISPATPGSNGITRDFRERAGSHYVDTGITEEHAAAF AAGIAKAGGRPVLATSATFFQRIYDQLQQELALNHVPATLLIFGAGISGADNTHSGTFDM TMFANTPDVTCLAPTSGEQMLDMLAWATGPSDHGVTAIRMPGEQILAMERSADMAFDPAE RADAHETTIDITGDCPFTRYQIVRPGREVAILGLGNTLPLAAEVAATLENDDDINATLID AQQYSAMDGELLDVLADGHRVVVTLEDGQLEGGWGEKVTAFYANSTNPKAATVHALNFGA SKEFTDRVPLAELDERYGLTVEAVADRIRRVLAR >gi|148337405|gb|DS264454.1| GENE 670 744797 - 745057 90 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154486984|ref|ZP_02028391.1| ## NR: gi|154486984|ref|ZP_02028391.1| hypothetical protein BIFADO_00821 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00821 [Bifidobacterium adolescentis L2-32] # 1 86 96 181 181 169 100.0 5e-41 MLPAVIQQRGTNLQTQITQLLRRKGMHIRRRMNRTQYASGHYAQLSFPEPVFFTAENPIP LYASAGVSVVKYLQSLLNCGTMETMK >gi|148337405|gb|DS264454.1| GENE 671 745094 - 746095 1217 333 aa, chain + ## HITS:1 COG:BS_yogA KEGG:ns NR:ns ## COG: BS_yogA COG0604 # Protein_GI_number: 16078904 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus subtilis # 24 330 19 329 329 189 36.0 9e-48 MKAVYAAGTDYDNPLSQLKVGELDTPETKPFWSTIHVAAASVNHHDIWSLQGVGLSAEQT PMILGTDASGVLDEDIPVRKGLKAGAEVVLYTFVGTDGAGVMPGERRTILSEKYAGTMAE TTQVPSANVFAKPANLTLDEAAALGTSWLTAYSLLFTSANVKPGDTVLVQGAGGGVSTAA IQLAHAAGLEVFVTSRSEEKRDRAITIGADAAFETGARLPHKVDAVIESVGAATWSHSVK SVRPGGTIAICGATTGDQPGAELTRIFFQDIRVQGNTMGSRDDFARLLKFVEHADLHPVI DSTYALADAPAAFRKVVDGDVFGKVVLHIEPSK >gi|148337405|gb|DS264454.1| GENE 672 746149 - 746646 758 165 aa, chain + ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 5 165 2 162 162 211 67.0 5e-55 MADNKPEVAVIMGSASDWETMKHACEMLDQFEVPYMKQVISAHRTPELMGEFAHNARANG LKVIIAGAGGAAHLPGMVAAQTTLPVIGVPVRSHALSGWDSLLSIVQMPGGIPVATTAVG NSGATNAGLLAVSILSTTDERLAKALQDYRDSLKEKVAESNAQLV >gi|148337405|gb|DS264454.1| GENE 673 746630 - 747805 1484 391 aa, chain + ## HITS:1 COG:lin1886 KEGG:ns NR:ns ## COG: lin1886 COG0026 # Protein_GI_number: 16800952 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Listeria innocua # 15 385 6 373 374 375 52.0 1e-104 MPSLSEETNGRIERLMPGATIGIIGGGQLGRMMALSARYMGFRIGVLDPTPDCPTAQVAD FQVTAEYDDIAAIRELAEKSDVLTYEFENVDADAIDQVRSLAAAPQGTDLLRVTQDRVNE KRFINDHGTPTAPWKAVNSVEELEAALDEIHYPAVLKTRSGGYDGHGQTVLKSEADLEQV RARADHDGSFPPSILEGFVDFAFEASILVAGNGKDYVTFPIVRNEHRNNILHMTIAPAEV DETVAKEAHELALRLAKGFELAGILAIELFITKDNKVIVNELAPRPHNSGHYTIEACSFD QFDAHIRGIAGWPLEQPQLLKPAVMVNVLGQHVAPTRALIADHPEWNVHDYCKAEVRHDR KMGHITVLTDDTAKTVADLEATGCWDDLKKA >gi|148337405|gb|DS264454.1| GENE 674 747817 - 748215 447 132 aa, chain + ## HITS:1 COG:Cgl2228 KEGG:ns NR:ns ## COG: Cgl2228 COG0735 # Protein_GI_number: 19553478 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Corynebacterium glutamicum # 6 129 16 141 144 126 49.0 1e-29 MSEHIVRQTRQKDAIRDALNGCDEFISAQELHRKLEDRGEHIGLATVYRQLNALVEAGRA DTVRLDGQQLFRLCGDDGHHHHLVCTNCGKTVEIESPSESWLKGISDKYGFTIERHTLEV FGLCEDCRKADK >gi|148337405|gb|DS264454.1| GENE 675 748361 - 750433 2871 690 aa, chain + ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 102 689 285 822 824 286 33.0 7e-77 MTKATSKNEPIEELDIATVDPMAKKAGKEFPGWLYGVLFVLFDAVGVAALQIGVSESATR VQLSNNMWLTGWGFVGKMFTSANFVAALNLILWGVLYVILLMLTNRFWVATPIFLAVTFI VAVIEHFKVSIRYEAILPSDLNFLKADAGNLMGFMPAGAQWTILIAVVAFAAFVALFVFL NRRDARHGKLFRGSDKQSRSVNAITRLLLILLPGLFFTLYSMQVSTVGSWAKTFATVMGD KPSMWDSVYDAQRNGPLVAFTRQLNPKVMVKPDDYSEETMKQVAARYEKAAKKINAKRSA NMTDSTVIYVLSESFSDPSRVPGLKVNKDSIPNIRKIKQNTTSGLMLSSGYGGGTANLEY MGLSGLSMANFDSSLTSPYQQLVPSEHWTPTINQMWGASKNSIGLHPYESSMYSRATNYK KFGFSHFYTLTGPDVISHQDKIDDSPYVSDEATYQSTLEEVRKTKSNQFLQVITMQNHMP YHDWYKYNDFKASSTTGKPLKDDEKESIETYQKGASLTDGATAGFLAELDKLDKPVTVVF YGDHLPGIYSSASADDGNSLALHQTDYFIWSNKASGTQGNKIDNAEYSSPNFFVAQAAEH MDAKVSPYLAFLTEMHSKISAMEPPVVNNIQGWDRIPEGQNIYLNSKGEPMAEDDFDAET RQLLADYRLIQYDITTGKNYLKNTSFMTLP >gi|148337405|gb|DS264454.1| GENE 676 750598 - 751860 1804 420 aa, chain - ## HITS:1 COG:SPy0032 KEGG:ns NR:ns ## COG: SPy0032 COG0151 # Protein_GI_number: 15674274 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Streptococcus pyogenes M1 GAS # 1 418 1 419 421 464 55.0 1e-130 MKVLVIGSGAREHAIAHALMRGDSVSEVTVAPGNPGMELDGIRTTQLNPSNHAALIDFVK NNGYDWVFVGPEVPLIEGIVDDFAAAGIKAFGPNKAAAQIEGSKDFAKQLMERHDIPTAK YQTFDDLERSTAYVREHGAPIVIKADGLAAGKGVTVAMDEETAIAALEDIFVDHRFGNAG AKVVIEDFLEGQEFSLMSFVNGTDFWPMPISQDHKRAYDGDKGPNTGGMGAYSPVPQIGQ DVIDTAIETIVKPTVQAMADEGTPFTGILYAGLIATADGPKVIEFNARFGDPETEVVLPK LTSDLGAGINAILNDETPEFTWDEDNATLGVVLASDGYPTNVVKGAAIPEIKVDDDSHVY YAGVTRGEHGLVANSGRVLFVETSAADIKTAQDKVYGIIDKLDTTGMFYRHDIGFKALNA >gi|148337405|gb|DS264454.1| GENE 677 751951 - 752985 871 344 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169632702|ref|YP_001706438.1| phosphoribosylaminoimidazole synthetase [Acinetobacter baumannii SDF] # 4 342 13 345 356 340 52 1e-91 MPKAYEEAGVSVEAGYEVVKRIKSHVARTNRPGVVGGIGGFGGLFDLASLGYKEPVLISG TDGVGTKLVVAKMANKHDTIGIDCVAMCVNDIAAQGAEPLFFLDYIACGKNDPALLEQVV SGVADGCVQAGSGLIGGETAEMPGMYDEDEYDLAGFAVGVAEKSAIVDGSTIAEGDVLIG LPSTGVHSNGFSLVRKALFEQVGYTVDTVLDELGGEKLGDVLLTPTKIYVKALSPLFKAG VVKGVAHITGGGFIENIPRMIPDGLAAHINLGSWPVLPIFDVLEKAGSIDHMEMFNIFNM GIGMVLAVSAEDADKTMELLKSNGEAGYVLGNIVKKTGEDVELQ >gi|148337405|gb|DS264454.1| GENE 678 753005 - 754519 1955 504 aa, chain - ## HITS:1 COG:SPy0026 KEGG:ns NR:ns ## COG: SPy0026 COG0034 # Protein_GI_number: 15674270 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 472 1 472 484 719 70.0 0 MSAELEDIHEECGIFGVWGHSDAARLTYFGLHALQHRGQEGAGIVSNDNGHLIGHRGTGL LTQVFSDEREIERLKGDKAIGHVRYATAGSGGTDNIQPFIFRFHDGDMALCHNGNLTNCP SLRRKLEDEGAIFHSNSDTEVLMHLIRRSSKPTFMDKLKEALNTVHGGFAYLIMTEHAMI GALDPNGFRPLSLGRMTNGAYVLASETCALDTVGAELVRDIRPGEIVVVDDDGYRIDRYT DQTQLAICSMEFIYFARPDSNIYGVNVHSARKRMGARLAQESPVDADMVIAVPNSSLSAA SGYSEEAGLPNEMGLIKNQYVARTFIQPTQELREQGVRMKLSAVRGVVKGKRVVVIDDSI VRGTTSKRIVQMLKEAGAAEVHMRISSPPLKYPCFYGIDISTTKELIAAKKSVDEIRDYI GADSLAFLSLDGLVESIGLGADAPYGGLCVAYFNGDYPTALDDYEADFLKSLTPEDRVRL PEFALYKSKYEGNEYTTTSSQEEH >gi|148337405|gb|DS264454.1| GENE 679 754575 - 754820 119 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFHAFRGRIEGFEVDCHVYPSGHDAPSMQWLIRGTSRTPTTVIRVFNVFHHNSFFERLFD CMSGSIYRLRTGQNPTLVAAH >gi|148337405|gb|DS264454.1| GENE 680 754752 - 756383 1158 543 aa, chain + ## HITS:1 COG:SA1196 KEGG:ns NR:ns ## COG: SA1196 COG0389 # Protein_GI_number: 15926944 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Staphylococcus aureus N315 # 4 364 10 328 420 166 32.0 1e-40 MAGRIYVAIDLKSFYASSECVEHGFPPLSTHLVVADQERTDKTICLAISPSLKAYGLPGR ARLFEVKAKLKEINAVRRAAAPGGVLTGKSYDAKALAANPNLAADVFIAKPRMSHYLAMS AKIYGIYLKYVSAEDIHVYSVDEVFMDVTGYLRAYGKGVEEMTRDIIRDIHTQTGITATA GIGTNMYLAKVAMDIVAKHIQAGEDGIRIARLDEMSYRRLLWNHRPLTDFWRVGRGYARK LEAHGLATMGDIARCSIGRADEYYNEDLLYKMFGVNAELLIDHAWGWEPCTIADIKVYKP AGHSLSSGQVLTGPAGFDAARLIVREMADTLSLDLVAKGVKAGRVGLMVGYDTASLDPKR LGKDGSADLKAIAEHAVATYDGPVSIDRYGRRVPKPATGSIALPEPTSATSRICDAVDKL FLSIVDRRLLVRRLNVVAADVLTDEQLEERRQAAASEYTQPDLFAAMEAPVDSASADAAE CEAMRSADGGSKDSPRGDAELHMQQTLLDIKRKFGRNSIIKAMDMFDDATGQQRNKQIGG HAA >gi|148337405|gb|DS264454.1| GENE 681 756380 - 756607 289 75 aa, chain + ## HITS:1 COG:no KEGG:BDP_0722 NR:ns ## KEGG: BDP_0722 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 75 1 75 75 108 82.0 6e-23 MSLTETHRYDDIIDLPHHQSQTHAHMSMHNRAAQFMPFAALTGYDDIIRQTAQSSDDAVE RANRPVDLAEGYLSA >gi|148337405|gb|DS264454.1| GENE 682 756719 - 760453 5572 1244 aa, chain - ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 2 955 5 966 985 994 53.0 0 MVFRVYVEKKPGFDVAAQQLANELRTILGIEALKNVRLVNRYDVEGISEELFAQATPTVF SEPQVDNVYADLPDFGSDTVFAVEYLPGQFDQRADSASECIQLISQGERPTVRSAKVYAL EGELSEADVEAIKHYVINPVEAREASLDVKTTLKTQVPVPGKVEVIDGFRSMSDAELEQF IEDRGLAMDLADLQFCREHFTEEQRDPTITEIKVIDTYWSDHCRHTTFGTQLDEVSIDDA TVKAAFDKYLEMRHELGRDAKPVCLMDMGTIGAKWLKKNGILKNLDESEEINACTVKVKV DVNGHDEDWLFLFKNETHNHPTEIEPFGGAATCIGGCIRDPLSGRSYVYQAMRVTGAADP TVPVSETLEGKLPQRKLVTTAAAGYSSYGNQIGLATGQVNEIYHPGYVAKRMEVGAVVAA TPADHVRRETPAPGDKVILLGGRTGRDGIGGATGASKAHNVESLELDGAEVQKGNAPVER KLQRLFRRGDACRLIKRCNDFGAGGVSVAVGELADGLYVDLNKVSKKYEGLDGTELAISE SQERMAVDVAAEDVDEFLGYAKEENLEAEVIATVTEDPRMTMVWNGDTIVDLSREFLASN GAPKHQVVHVEAQHGYTTPWTSGTLSERMHTMLTDLNVASNKGLSERFDSTIGAGTVLMP FGGRKQLTPNMAMVAKLPVFGETTTASAMAWGFNPYIMEQNQFTGAYLSVVESLSKLVAA GFEHEKAYLSFQEYFEKLRDEPERWGKPMAAVLGALMAQVDLGAGAIGGKDSMSGTFEQL DVPPTLISFAVAVGNMKRATSPEFKGAGHRVVRIAPRYKADGLTPDKDALLEVFSAVEEL TDFGDALAVSTPGYGATAEAIFKMTVGNQIGMKLDDGIAVDDLFAPAYGSFIIELADNAK VPAVSNLVEVSEVGETTEEYSFVAAGETLDLAELQDAWEGSIESVFPYRSKGEEKGKTVE TMSFDAPKKTVYTGTGVAKPHVIIPVFPGNNCEYDSAAAFERAGADVSTLIVNNLTPAAV AESTNALVEEIKKSQIIMIPGGFSGGDEPDGSAKFITAFFRAPAVTEAVRDLLNNRDGLM LGICNGFQALIKLGLVPYGDIVPMTAECPTLTFNTIGRHQSRLVRTRVASNLSPWLAKTE VGDMHTIAISHGEGRFVASDDVLAQLKANGQIATQYVDEAGVPGMDLDVNPNGSLLAIEG ITSPDGRVFGKMGHSERYSNGTFVNVPGEKDQPLFAAGVEYFAA >gi|148337405|gb|DS264454.1| GENE 683 760573 - 761325 1171 250 aa, chain - ## HITS:1 COG:BH0626 KEGG:ns NR:ns ## COG: BH0626 COG0152 # Protein_GI_number: 15613189 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Bacillus halodurans # 1 237 1 233 237 242 52.0 4e-64 MEKLEKLYEGKAKQLYATDDPEVLWVEYKNSATAGDGEKKEDFAGKGRLNNLITTLIFDL LKKRGIDSHLVARVGETSQLVKKVTMFPLEIVLRNTAAGHFCSRLGVKEGIELKEPVLEY FLKNDDLHDPFVNDDDLVALGVCTREDLAEIAPLARRINEALIEIFAKIDVKLVDFKIEM GRTSDGTLLLADEITPDSCRLWDQRDHSGKVEHLDKDLFRRDLGDIIPAYEEIESRLAGL AKSEGIEVAE >gi|148337405|gb|DS264454.1| GENE 684 761461 - 762714 1377 417 aa, chain - ## HITS:1 COG:PM1053 KEGG:ns NR:ns ## COG: PM1053 COG0027 # Protein_GI_number: 15602918 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Pasteurella multocida # 8 416 4 393 393 352 51.0 6e-97 MTEENRALGTPLGKHPTRVLFLGSGELGKEVTIELMRLGAWVCAADSYAGAPAQQVAHEY RVLDMANADQLRALFDEIQPDIIVPEVEAIATSELAAAAERGAQVVPSAEIAAICMDRER LRVLAHEELGLPTTPYRFAGSLEELREGAQIVGYPCVVKPIMSSSGHGQSVVRSAEAIDA AWTEAQEGRRAHDEGDVSRVIVEALAPLDYELTVLTVSSSAGIVTCAPIGQRQESGDYRE SWQPATFTPDVLEQAQHIARTAVEGLVARAKASGEKGWGVFGVELFVLTDGNVLFNEVSP RPHDTGMVTMASQRLSEFALHARAILGLPITQEHVALSIPQGTVAASHAIVVQGDGEAEF RNVAAALAEPGTDLRIFAKPEVHGHRRMAVALAIGGNEADARAKAGNVAESLDIAIV >gi|148337405|gb|DS264454.1| GENE 685 762750 - 763916 1271 388 aa, chain + ## HITS:1 COG:HP0421 KEGG:ns NR:ns ## COG: HP0421 COG0438 # Protein_GI_number: 15645049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Helicobacter pylori 26695 # 13 385 1 377 389 235 33.0 1e-61 MSENEKNETQPPLTIAMVVDTSGNRGNGTSNSALQWAQELERQGHHVRLVGIGAPEYPAR VNHVPLVSWVAKKQQMQFAEPSDTLFRKAFDGVDVVHIYTPFRFGQHACKVAKQMGIAVT AGYHVQPENVTYSAGPLKYVPGIDSFIYWLFDIWLYRKIDHVHVPTELGASLLRSHGYKS KLHVISNGYESRFTPKRQRKADEPSPVPFRIVASGRLTNEKNHVALIRAIARCRHAQDIE LVIAGTGPLKKRLQRMAGRLLSRPASIGFHRNADMPALLRSGDLLVHPSIADLESVSVIE GMAAGLVPVIASSSLSAAGQFALLDESLFPVDDVDALARRIDWWIDHPAQLAKWGGTYAE HTKTNYSVESSVRKFVAMEREAIADNRR >gi|148337405|gb|DS264454.1| GENE 686 764008 - 765033 1482 341 aa, chain - ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 341 1 341 341 379 53.0 1e-105 MLSFENDYSCAATPEIIARLAETATNQYPGYGTDDVCESAKAKIREACACPDAEIFFLVG GTQTNQVVIDAITPPYAGVVAATTGHVNVHEAGAIEFTGHKVLTLPHHDGKIDADELDEY CATFYADGNYTHMVFPGCVYISQATEYGTLYTLAELEAIRKICTKYDMPLFIDGARLGYA LTASGNDVTIEDIARLADVFYIGGTKVGAMFGEAVVFTHGNMPKHFVTIVKQHGALLAKG WLLGLQFDTLFTDGLYLRIARHANDAADRIRKVLVERGYTLTFDAPTNQIFVTLDNETSE RLQRDVRLGFTEKADDTHTVMRICTSWATTDEQVDELVALL >gi|148337405|gb|DS264454.1| GENE 687 765032 - 765313 77 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487001|ref|ZP_02028408.1| ## NR: gi|154487001|ref|ZP_02028408.1| hypothetical protein BIFADO_00838 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00838 [Bifidobacterium adolescentis L2-32] # 38 93 1 56 56 108 98.0 2e-22 MVVPFVVGCLRSGKSGSARSAAADSKKPRNFFRGFTGVANAARTRDLLNHNQMLYQLSYS HHVLTSMRKRNEWILYTIFWMCARRRVALPAVK >gi|148337405|gb|DS264454.1| GENE 688 765479 - 766540 1750 353 aa, chain + ## HITS:1 COG:BS_yocS KEGG:ns NR:ns ## COG: BS_yocS COG0385 # Protein_GI_number: 16078995 # Func_class: R General function prediction only # Function: Predicted Na+-dependent transporter # Organism: Bacillus subtilis # 1 327 1 318 321 252 45.0 6e-67 MQKIKAFGDWLTKWFTVIVIVWAVFNYFVPQTSLWGKSYTGYFLGIVLFGMGLTLTLDDF KRILTQPLMVVVGTVAHFVIMPLVAVLLCWIFRLDGPLAVGVILVGCCPSGTSSNVMSYL SRGDVALDVSIGILSTLCAPFMIPLLMQWLASQYVTVPVESLFLNAVKVVLFPIALGVIC HAIFKEKIEKVTVALPIVSQVAILLIIGVVVAANGSKLFVASSLLAIPVVILHNLCGYAL GFGFSKLMYKVYPKGFRYAQQKAITFEVGMQDSALGATLALSSFASNPLAAVPSTFFSVW HNISGSVLSSWWREHDDKHQIHPDSDNGEKGSAAKASEAGDAVKDESEETVNA >gi|148337405|gb|DS264454.1| GENE 689 766435 - 766806 239 123 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGLTAIGASLRPDEFSTDLQLRPSPLVYRKRTYDTGQNTPKSQYFQYLTELQRKATQSNI AMEKQVKTEQPLNRSVRFRGCLTDATNHIQALTVSSDSSLTASPASEALAAEPFSPLSES GWI >gi|148337405|gb|DS264454.1| GENE 690 767276 - 767647 622 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025548|ref|YP_909393.1| 30S ribosomal protein S12 [Bifidobacterium adolescentis ATCC 15703] # 1 123 1 123 123 244 99 9e-63 MPTIEQLVRKGRQAKPKKSKTLALKGSPLRRGVCTRVYTTTPKKPNSALRKVARVRLSSG VEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTQGVKDRKQGRSLYGAK KAK >gi|148337405|gb|DS264454.1| GENE 691 767653 - 768123 787 156 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025549|ref|YP_909394.1| 30S ribosomal protein S7 [Bifidobacterium adolescentis ATCC 15703] # 1 156 1 156 156 307 100 6e-82 MSRKGPSKKHQLLPDPIYGSTVVAQLINKILLDGKKSIAEDIVYSALDMVKEKTDQEPVA VLKRALDNIRPSLEVRSRRVGGATYQVPVEVKPGRANTLSLRWLTDFSRARREKTMAERL ANEILDASNGLGASVKRREDTHKMAEANKAFAHYRW >gi|148337405|gb|DS264454.1| GENE 692 768154 - 770283 2962 709 aa, chain + ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 709 5 701 701 975 68.0 0 MALDVLNDLNQIRNIGIMAHIDAGKTTTTERILFYTGKNYKIGETHDGASTMDFMAQEQE RGITIQSAATTCFWNRQTHDEKQKFQINIIDTPGHVDFTAEVERSLRVLDGAVAVFDGKE GVEPQSETVWRQADKYGVPRICFINKMDKLGADFYYSVDTIKTKLGATPLVVQLPIGAEN DFAGVVDLIRMKAYVWNDVSGDLGAHYDTTDIPADLQDKAEQYRSELLDQVAESDEELLE KYLESGELTEDEIRAGIRKLTINREAYPVLCGSAFKDKGVQPMLDAVVDYLPSPEDVPSI VGFDPQDESIEIDRKPTTDDPFSALVFKISTHPFYGKLVFVRVYSGSVKPGDTVLDSTKE KKERVGKIFQMHADKENPVDAAEAGNIYTFVGLKNVTTGDTLCDEKSPISLESMTFPDPV IEVAVEPKTKADQEKMSIALAKLSDEDPTFQVKTDEESGQTLISGMGELQLDIIVDRMRR EFKVECNVGNPQVAYRETIRKAVMNQEYTHKKQTGGSGQFAKVLMNFEPLDTENGETYEF VNEVTGGHITKEFIPSIDAGVQEAMESGILAGFPVVGVKATVTDGQVHDVDSSEMAFKIA GSMCFKEAAPKAKPVILEPIMAVEVRTPEEYMGDVMGDINARRGSIQSMTDSTGVKVIDA KVPLSEMFGYIGDLRSKTQGRAMFTMQMDSYAEVPKNVSEEIIKAQRGE >gi|148337405|gb|DS264454.1| GENE 693 770452 - 771651 1274 399 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 399 1 407 407 495 62 1e-138 MAKEKYERTKPHVNIGTIGHVDHGKTTLTAAISKVLHEEYPDVNPEYDFNQIDSAPEEAA RGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTRE HVLLARQVGVPKILVALNKCDMVDDDELIELVEEEVRDLLDENGFDRDCPVIHVSAYGAL HDDAPDHEKWVEQIKKLMDAVDDYIPTPVHDLDKPFLMPIEDVFTISGRGTVVTGRVERG KLPVNSNVEIVGIRPTQTTTVTSIETFHKQMDECEAGDNTGLLLRGINRDQVERGQVLAA PGSVTPHTKFEGEVYVLTKDEGGRHSPFFSNYRPQFYFRTTDVTGVITLPEGVEMVQPGD HATFGVELIQPIAMEEGLTFAVREGGHTVGSGRVTKIIE >gi|148337405|gb|DS264454.1| GENE 694 771832 - 772395 833 187 aa, chain + ## HITS:1 COG:ML0522 KEGG:ns NR:ns ## COG: ML0522 COG0231 # Protein_GI_number: 15827184 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium leprae # 4 187 3 186 187 251 67.0 6e-67 MAQTTNDIKNGSVLNLDGQLWTVIKFQHVKPGKGPAFVRTTIKNVLSGKIVDKTFNAGMK MEFETVDNRNLQYSYEDGDNFVFMDMTTYDQIFIPKTLVGDQAKFLLEGTDCVVSFHDGT PLSVELPASVVLTVTHTEPGLQGNRSNAGTKPATVETGAEIQVPLFIGEGEKVKVNTTDG SYLGREN >gi|148337405|gb|DS264454.1| GENE 695 772417 - 772860 544 147 aa, chain + ## HITS:1 COG:ML0523 KEGG:ns NR:ns ## COG: ML0523 COG0781 # Protein_GI_number: 15827185 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 2 128 7 136 190 103 43.0 7e-23 MARSTARKRALNTLYEADEKGQDILSLLAERIEQPGAQTPLPDYAIEIVRGVAEHIAAID AMLDEHSTGWKVKRMGVVDRNILRIAAWEIMFNDDVPNMVAIDEALSLAKTLCDDDSPAF IHGLLSAVSADAEATEVAEQPTEPSAE >gi|148337405|gb|DS264454.1| GENE 696 772948 - 774165 1648 405 aa, chain + ## HITS:1 COG:Rv1383 KEGG:ns NR:ns ## COG: Rv1383 COG0505 # Protein_GI_number: 15608523 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Mycobacterium tuberculosis H37Rv # 16 395 4 371 376 434 59.0 1e-121 MNQYDSEAVMFDPQDAVLVLEDGQVYVGEPYGAIGTTSGEIVFATGMTGYQETLTDPSYD RQIVVQTFPHIGDTGINGEDPESSRIWVAGYVVRDPSPNVSNWRATGSLDDDLESNHIVG ISHIDTRKLVRHLRSAGVMRAAIFSGDALLDGDGKLRTIDSMLDEVKATPQMKGMSLYDE VSTKEAYTIEPCGEFEGKEPLFTVAAVDLGIKSMTPHRMAERGCRVHVVPSTITFDELQS LNPDGVFFSNGPGDPEQADPEVNLLRQVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGH RGINQPVKDMTTGKIEITAHNHGFAVDAPIGETVDAPFENGKYGKVFVSHIDLNDNVVEG LQCVDIPAFSVQYHPEAAAGPHDAAYLFDRFVDLMRSVKEGTRNA >gi|148337405|gb|DS264454.1| GENE 697 774158 - 777538 4656 1126 aa, chain + ## HITS:1 COG:MT1428 KEGG:ns NR:ns ## COG: MT1428 COG0458 # Protein_GI_number: 15840842 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Mycobacterium tuberculosis CDC1551 # 1 1114 1 1105 1115 1279 61.0 0 MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM ADATYIEPISTPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL DAIDRGEDRELFKKVVEEAGAESARSDIAHSLEEVDKIAEKFGYPLVVRPSFTMGGLGSG IAHDEDELHRIAGAGIHYSPTDEVLIEEGIEGWKEYELELMRDKKDNVVVVCPIENVDPV GVHTGDSITVAPVFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVNPGTGRIIVIEM NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITQSTPASFEPTIDYVVTKVPR FAFEKFPGADPTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMGFNWDGDKPSEDEV SQLLDAIKVPTEHRYLQIQRALWGGATEEQIFAATKIDPWFIRQFALINETALEVKNAEK LTRKLLKKAKLAGLSDLQIAHLRRLGDEGENTIRELRWSYDLRPVFKTVDTCAAEFDAAT PYYYSCYADETELRPRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKNYDTIMVNCN PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPIKGVIVQLGGQTPLSLAARLKAAG VPILGTTPESIDLAENRELFGEVLKKADMNAPRYGTALSLDEAREAAHAIGYPVLVRPSY VLGGRGMEIVYDDAQLRKYVDRALKEAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFD GEELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIAKGCGVQGLINVQ YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMVGETIQQQRDNGLLLPHGDG GDIHRGQQVAVKESVLPFKRFRTPLGKTVDVLLGPEMRSTGEVMGFDRDFPHAFAKSQLA AYEGGLPTSGNVFISVNDTDKRQLPLFAARLVELGFNIWATEGTASVLRRYGIDSKIVDK ISVRMDSDPDDPITTYHAEGSVGKNVVQLIEEGAIDLILNTPNSRGSRSDGYAIRSAAIA ADLPQFTTMTEFSAVLMAIEAVRNNDYQIMSIQDHSTQLFELESRD >gi|148337405|gb|DS264454.1| GENE 698 777541 - 778479 1099 312 aa, chain + ## HITS:1 COG:Cgl1570 KEGG:ns NR:ns ## COG: Cgl1570 COG0284 # Protein_GI_number: 19552820 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Corynebacterium glutamicum # 16 290 3 271 278 147 34.0 2e-35 MSSPSSEEVNAQRSDFGLRLSNSMAKYGPLCVGIDPHRQLLTDWGYNVDALGAELYSMRM LQAANGRAAAVKFQSSMFERYGSKGIAALERVLYAARQMGVITIVDCLHGGLPTTISAFA DAYFKPGAPLLADAITLLPYYGARSLGGVINDALNNGRGVFIASLTSNQEGASLQTAIRQ AGEYKGKTVAYGIASTAQKFNKGNDGMGSVGLIIGATIGQWINDSGVDPAKFTGPILSPG YGWQGAETRDLKTVFKGTKGNVLVTVSRSIATHGPDIAKLTEATASVARDIRQALTEAQN ESADDAADGDVE >gi|148337405|gb|DS264454.1| GENE 699 778540 - 779127 506 195 aa, chain + ## HITS:1 COG:Rv1389 KEGG:ns NR:ns ## COG: Rv1389 COG0194 # Protein_GI_number: 15608528 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium tuberculosis H37Rv # 7 185 21 196 208 151 47.0 8e-37 MADSQHGRLIVLCGPAGVGKGTVLGRVREQHPEIWLSVSATTRQPRPGEVDGVNYFFMTE PEFLAKEKAGEFLETADVFGLAHYGTPVKPVVEHLERNIPVVLEIDLQGARTVKRRAKEL GLEVLTVFIEPPSFEELKRRLIGRGTETPQQQAKRLETAKVELAAAPEFDKRIVNNVVDE AADELWHIIAEEFGL >gi|148337405|gb|DS264454.1| GENE 700 779215 - 781068 2427 617 aa, chain - ## HITS:1 COG:HI0738 KEGG:ns NR:ns ## COG: HI0738 COG0129 # Protein_GI_number: 16272679 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Haemophilus influenzae # 1 610 4 611 612 755 59.0 0 MRSAKLMNGRVFAGARALYRAAGVDGKDFGKPIIAIANSFDEFLPGHVHLNKVGRLISDA IKEAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQVNAHCADALICIPNCD KVVPGMLMAALRLNIPTVFVSGGPMEAGTTVLPDGTVKKNTDLIDVMYASADDNLNEEDL LAYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAEQVVK IAKQYYDDDDDSVLPRSIATKKAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTLDDI ERISHTVPCICKASPSGEWEISDVHRAGGITGILGELDRAGKLHRDVHSIDYKSLEDKLN DWDIMRDTCTEEAKQMYLAAPGHIVSPEPWTHTTLFDSLDRDRVNGAIHDIDHPAVTEGG LAVLRGNLAPDGCVVKTAGVPKEIWTFRGPALVVESQEQAIEVILNDTLKPGMALVIRYE GPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHIAPEAANKGPIALI KNGDIINIDIPNRTVNVELSDEELAQRRAELEAGDGYVAHRDRKVSQALKAYAAFARSAD KGATRDPELIDKLSGLA >gi|148337405|gb|DS264454.1| GENE 701 781073 - 781573 508 166 aa, chain + ## HITS:1 COG:MT1435 KEGG:ns NR:ns ## COG: MT1435 COG1758 # Protein_GI_number: 15840849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Mycobacterium tuberculosis CDC1551 # 66 159 40 133 133 109 58.0 2e-24 MPPIVLAKRDTCFVKSHYVEIFGNPCDSLTGWITTLAEKACGRGKVEVQWIAYTNDFGKE AFGLSDDLEIITMAFGTEPTPTGLADPPIDDLMEHADSKYALAIFAAKRARQINSYFTQL NEGLLQNVGPLVEYQNQEKPLSIAFREINSGLLEETLGEDDLTEGN >gi|148337405|gb|DS264454.1| GENE 702 781747 - 782961 1677 404 aa, chain + ## HITS:1 COG:Cgl1565 KEGG:ns NR:ns ## COG: Cgl1565 COG0192 # Protein_GI_number: 19552815 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Corynebacterium glutamicum # 4 403 7 405 407 474 63.0 1e-133 MAELKLISAESVTEGHPDKVCDQISDAILDDMLAQDPHSHVAVETCATVGQFFVFGEVTS EGYSDIQNIVRSVVRNIGYTSSRVGLDADSCGVTVSLTEQSPEINQGVARLSGEEESKAS REQRYEAQGAGDQGVMFGYACDETDVLMPLPIHLAHRLAYRLAEVRKSGEVPHLRPDGKT QVTIEYDDDDHPVRLDTVLVSTQHDPEVDQAWLKEQLTEHVIRPVLDDVLADRVAHDEYR VLVNPTGSFILGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYAARWV AKNIVAAGLAHKVEVQVVYAIGVADPVSINVETYGTEIGVTREQIQQAVRKVFDLRPAAI IDELDLKRPIYSKTAAYGHFGREDADFTWEATNMVDELKEAIKA >gi|148337405|gb|DS264454.1| GENE 703 783020 - 785251 1479 743 aa, chain + ## HITS:1 COG:Cgl1564 KEGG:ns NR:ns ## COG: Cgl1564 COG1198 # Protein_GI_number: 19552814 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Corynebacterium glutamicum # 27 739 5 684 688 238 28.0 3e-62 MTNEDAEQLALDGLAPRKRRKRAPAVKTPAAEHPIAQVVLDIQATHLGQTFDYFVEEKYS AAAQPGVMVRVRFGGQRVNGIIWKRADTSATPESSIRYIERVVTDRVLVPESMRDDMTRI ADAFGGTRANILRLAVPTRVAKVESQLRVGNRDAAGTAAGKQRLAAVDQEIYGQLQRQYG NINLLHDALQGRRFQSFVFDLLPGADHWRRCAAWMVAAALAQNKPAVLVLPTMREIADMT ETLRSVGLKPFAPTGAANGVYDGDFAVLNAQMAPADRYRAYLAISCGQVRCVLGTRAAMY APVEGNALFLILDDVCYQDADGMMPYANARGVLRLRAKSHNGVFVAMANARSAQSQWETD AAHVGDTQVSGFSTPIHALPAVTKEASPWIRWLNRDELARLADPTIGARVPHTAVRILSK ALETGPVLLSIPQDGITEALSCSKCHRQVRCARCTGPLERLADGTIRCRWCGAATVQWSC PTCHNERMRVVRVGAAGTAMELARLFRGVPMVLSTPSQPRGVVSDIGFAPQLVIATPGAE PRVRGESPAQCEYRAVAILDAWTSLYASGIDADVDTLTGWMRAVSLCAPRTRGGQALLIG ETDPVLARSLMLWNSPMLAQVEVEDRAQTALPPVFAAACVWGRRDAVGTMLKRIGALAGG DMATIDTIAGTMPSVLGPVPIPQPRTIDSRELEGTADRVKAVVRVPQGRRAELALRLRSA SARHVASREPGELRFQMDPKERI >gi|148337405|gb|DS264454.1| GENE 704 785318 - 786028 974 236 aa, chain + ## HITS:1 COG:mll7522 KEGG:ns NR:ns ## COG: mll7522 COG1011 # Protein_GI_number: 13476249 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Mesorhizobium loti # 28 228 3 201 212 90 31.0 2e-18 MKGWPGEPQMEYDVLMADGNAAANAGRQITDVIFDFGNVLIYWDPAAVMTPRYSDGLVEQ FLDNDVSGFYDINNELDAGMSNDDGVALMRERHGDQWADMMRYYLDNFVDSLTGVVPGAR VLINDLKAAGVHVWGLSNWQKDLFPVALDHYDILCSLEDRVVSGYVGLRKPHRDIYDYAL KQFGIDASGALFVDDKAMNIVGANEAGIRGVRFKDARALRTLLIDAGVAIPAVHEK >gi|148337405|gb|DS264454.1| GENE 705 786133 - 787095 1069 320 aa, chain + ## HITS:1 COG:MT1450 KEGG:ns NR:ns ## COG: MT1450 COG0223 # Protein_GI_number: 15840864 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 2 317 1 308 312 223 46.0 4e-58 MLKVLFAGTPDVAVPSLKLLAQDTEHFEVVAVLTRPDAPTGRGRKLVANPVKQAALELGL PVIESDPSEETFVSELAATGAQAAAVVAYGKILKQDVLDALPMGWYNLHFSLLPQWRGAA PVQRSIWAGEKVTGATVFRIVRAMDAGPILAQSTVEIGAHETAGELLGRLAEDGSHLLAA SLQALADDQIAPVEQPAGAYEVAQKITVEDAHIRFDVPVFAADRQIRACTPNPGAWCELH AHADAEPATLHVLRAQPADISNPNAPASLEPGHIVAGKKNVWVGTSTEPLELLEVKAQGK KAMRAADWARGAHLDNAFCE >gi|148337405|gb|DS264454.1| GENE 706 787247 - 787897 684 216 aa, chain - ## HITS:1 COG:L0085 KEGG:ns NR:ns ## COG: L0085 COG0560 # Protein_GI_number: 15672587 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Lactococcus lactis # 7 215 1 209 216 240 55.0 1e-63 MASLPTLSAPGLLVMDVDSTLIDEEVIDELGVAAGVGEQIASVTARAMNGELDFREALRA RVALLKGLPTTIFDEVYHRVHFTHGALELIDTLHAHDWKVGVVSGGFHEVVDRLAADAHL DYWIANRLEAADGRLTGHVLGDIVTKDTKLESLRAWAARMGIDMAQTVAVGDGANDLPMI HAAGLGVAFCAKPKVQEDAPHRLNERDLAKILDYLK >gi|148337405|gb|DS264454.1| GENE 707 787986 - 789551 1856 521 aa, chain + ## HITS:1 COG:MT2175 KEGG:ns NR:ns ## COG: MT2175 COG0464 # Protein_GI_number: 15841607 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Mycobacterium tuberculosis CDC1551 # 18 518 59 585 609 395 43.0 1e-110 MESEVDMNDHDEETLASLQQANDQLMAKNHALVKALSRATQEMTKTKAQLNQLAGPPMTF ATMVRVHSAKTDEQGVQHASAEVAAGARRMIVPIAANLQASRLEPGRTVLLNENMVVVSQ LDTDTLGAVRSVRQVCDDGRLLVADGGGNVTLVRCSGTLAKQAISAGDRVNVDASLRFAL SLVPPENDDDLVLEEVPDVTFADIGGLDEQIERIRDAVQMPFQHRELFERYDLKPPKGVL LYGPPGNGKTLIAKAVANALAEGTDAGSGVFLSVKGPELLNKFVGESERLIRMIFKRARE RAADGKPVIVFIDEMDSLLRTRGTGVSSDVETTIVPQFLTELDGVESLDNVMVIGASNRI DMIDPAVLRPGRLDVKIRVDRPGIQQATQIVRHYLTDKLPLSPNVDAKALIGVLVNDIYA QDEHRHLCDICDDHGQWRPVYLADVVSGAVLKNIVDRAKTYAVKLSITTGQAAAIGINLL AKAVDEEYGETRDALLDADPEQWSRINGLEPGRVTGIRPVA >gi|148337405|gb|DS264454.1| GENE 708 789623 - 791206 1448 527 aa, chain + ## HITS:1 COG:no KEGG:BAD_0547 NR:ns ## KEGG: BAD_0547 # Name: not_defined # Def: proteasome-associated protein # Organism: B.adolescentis # Pathway: not_defined # 1 527 1 527 527 1008 99.0 0 MSVRRVMGTETEYAVSAPGQGRYNPVQLSFDVVGAASDASRSHIRWDYRQEDPVNDARGT RLERAAAHPDLLTDAPQLNITNVIAPNGGRIYVDHAHPEYSAPETTDPFEAVRYDRAGDL IMRAAAAKASETTGRKIVLHRNNVDGKGASWGTHENYMMLRSVPFDLVTRLMTTHFVSRQ IFIGSGRVGIGEHSENAGYQLSQRADYFHMKVGLQTTFDRPIINTRDESHSTDEYRRLHV IVGDANRMDVPQALKLGTTSMLLWLLEHADMAEIDLNEALEPLTLADPVEAMHTVSHDLT LAAPLPLETGGTTTAWQMQVTLRGLVYAAAATVYGTDTSGEPAWPDRSTRNIMAMWGQAL ADVATVRHADDDGRLTMREQASRLEWLLKWQLLEKLRRKTGSDWTDRRLAAVDLKWAALD PADSIFTRLAEQTERLVTDKQLAEAVGQAPADTRAWLRAEIIRRFPEQVVAASWSHLTVR GESSGDENVENSMVSLDMSNPLKFTESLCSEAFEHVHTASGIVESLR >gi|148337405|gb|DS264454.1| GENE 709 791341 - 792171 842 276 aa, chain + ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 79 264 77 246 261 83 29.0 6e-16 MELRQVALEVARILQDAGKHALNDQMNPRDLKSFEMTDNHLSFTSDIDKRLAQFISNRIT YVDVFDGFWQFRPEECHPGERYWCVGGIDGAINFVRSMPEWTITVSLFEFNDQCSAQPIL SVVHAPALGLTYLAVRGSGAIRIRKTPLGDKREKIMPSTTPSLDYAVVSFGMSHVPEESK RALEVVSRISGRPADIKRVGPSSLDLCKVADGTYDAYFEAHLHKWDVPAVSAGAVVVWEA QGHLSRWNGDLVHWRQENDVLATNGLITDDLRQYLA >gi|148337405|gb|DS264454.1| GENE 710 792266 - 792457 281 63 aa, chain + ## HITS:1 COG:no KEGG:BDP_0754 NR:ns ## KEGG: BDP_0754 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 63 1 63 63 67 74.0 1e-10 MPQKFEQMQSAEQKHDEDETIAQAGTQIDDTVDALDAVLDDIESVLESNAEEYVGSFVQK GGE >gi|148337405|gb|DS264454.1| GENE 711 792457 - 793923 1240 488 aa, chain + ## HITS:1 COG:no KEGG:BAD_0549 NR:ns ## KEGG: BAD_0549 # Name: not_defined # Def: proteasome-associated protein # Organism: B.adolescentis # Pathway: not_defined # 1 488 1 488 488 956 99.0 0 MPQLRDSGNHSTAPLDAHTKDEIQSFARIFGIETEYGVSVTGSDRPCDAGQTAMMMFQPI VAEARSTNTYIENGSRLYLDVGSHPEYATAEARDPMDALALDAAGELVMRDLALDAQRRL RSIQGAGSTVHVFKNNVDSAGHSFGCHENYLVRRFVPLKTIEQELLPFLITRQLFTGAGR MGEQGFQITQRADFLDEAVSSATTRSRPMVNTRDEPHADPDAFRRLHVIIGDSNRSQWAT MMKLATTHLVLCVIEQAGREGKDSGFARFSFADASAANHKVSRDLTGVEASFDMADGTVM EGGAVAIQERYLEIVERFVGQHPEVCSSLPRTDVHEVIRQWRRVIEAFRSGASETFADKV DWLAKRRLFDMLRNRAGSRLSVSKLEQLDMDYHDVANGALYASLCRRGAMRTLVNESQAH EAIDVPPHDTRAALRGRFIQSARSHNAQYSCDWTRLSLTSPNRMDVTLLDPFDAQPSDRF LTILEALQ >gi|148337405|gb|DS264454.1| GENE 712 793997 - 794797 862 266 aa, chain - ## HITS:1 COG:no KEGG:BAD_0550 NR:ns ## KEGG: BAD_0550 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 266 1 266 266 440 100.0 1e-122 MSVGQEHDSGADDPDLIRLNKRSLFTPSASVAVEQHSAVPHVSRSTYGTAKVEGRLTSPN ARVPEIITQRCGGITVKGHTLKSFAYTTDAVIIRNTNANAILAVYPFTGEPVITQALLTV AQMPLFVGVGGGTTTGPRVAELAMVAEMQGAAGVVINAPAPAETIETTMSMVDIPVIATV TEDDEITECKILAGAAIINVAAGARTAQVVASIRAHHPEIPILASGGGREDRILATIDAG ADAITWTPPSAQQLQSQMMAKYRGEV >gi|148337405|gb|DS264454.1| GENE 713 794794 - 795153 418 119 aa, chain - ## HITS:1 COG:no KEGG:BAD_0551 NR:ns ## KEGG: BAD_0551 # Name: not_defined # Def: MarR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 119 1 119 119 186 97.0 2e-46 MVDQRRQIIDEIHKLNILLIHTKLKTTRARTVARATTHVRNVDAARRGTVPRPKPSKPIE ADVHMLDCLNDEELSTLGELLQRIIDNTDTKLLDEEISERRKAIHEFLMLNHTDEEVRE >gi|148337405|gb|DS264454.1| GENE 714 795297 - 795578 410 93 aa, chain - ## HITS:1 COG:L102317 KEGG:ns NR:ns ## COG: L102317 COG0776 # Protein_GI_number: 15672484 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Lactococcus lactis # 4 91 3 90 91 66 48.0 2e-11 MAYNKSDLVSKIAQKSNLTKAQAEAAVNAFQDVFVEAMQSGEGLKLTGLFSAERVKRAAR TGRNPRTGETIEIPATYGVRISAGSLLKKAVTK >gi|148337405|gb|DS264454.1| GENE 715 795733 - 798168 2419 811 aa, chain - ## HITS:1 COG:Rv0585c KEGG:ns NR:ns ## COG: Rv0585c COG0392 # Protein_GI_number: 15607725 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis H37Rv # 23 811 20 795 795 163 25.0 1e-39 MSHDFPTSKHETRIEDVPPKRNRDFADLLHALFAVLVGAAVILFSIYLHGTTSGVESDVR SAGHVVSWLMDVPTSLLQQIAIVFITVSVLIQLLIAKEWLQSVVSAIALILGFAAIWGIS ALISGSGNDTLIMSMMSNGTSVGTGLLPDFYAAMASFLTVAGPRRTRSGTKWGWNILYTV AVLFVVLSWNSLSGVLVSFAAGRALGMLIRFMLGTQTNGAWGNQVAQALRSIGIDVASLS RRLATYTDSGMLKTTLDDDLTENSRIYDAIDVDGHQYTVSVLDNQVHMAGYLNQLWQWVR LTGVSMRRDRSSFDAIHHHYAMILGLQNAGLTVPGVYGVADSSESSILVFHRDHMPLECN PNTMSDHDMELFMTYLSEAHRHGFTHRRITPETLSRMENGQPVIAGWQNGDYGSAPPNYA LDKVQLLVLLGALNGIDRAIACARRTWGDEQLIDLAPFIQKAAVPAAIRALPACDKHMLN TLRSRIAALAPQEVADSMETVTLSRFSFRSFIAIALLVVAVYVVFTQIQPAEMIKAVKEA NIAMALVCVLFGLLAWFGSAMTLGCFMDVDKRNPIGLYCSQMASGFTAVSMPAGVGPAFV NLQFLRKSGYRNTAATAIMSAVWAVQGGTTIILLLLIGIFTGRNTLSGMIPTNTLILVIT IVALVISAAMAIPPVRHIVTEKYLPIVKSYARSLVNVLSHPKELAFGILGALVLNISTGL GFWIALMAFGCHTNPVETTFIFLLANTLGSAVPTPGGLGAVEAALSVAFTAVGIPSTIAV SATLVYRIAFYWLRIPMGAVAMKWLDRHNLI >gi|148337405|gb|DS264454.1| GENE 716 798316 - 799770 1947 484 aa, chain - ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 9 481 2 453 456 395 45.0 1e-110 MLLSMKLTDISPAIALTPLDGRYHKQTAPLVEYMSEPALNRERMRVEVEWMILLANGFEG NGNQTIVPGVKPLTDDEQAYLRSIPENFGAEGIAQHAAYEAKTHHDVKAVEYYIDDQLEK AADVLGHDTQLTGLKTLVHFACTSEDINNLSIARCVKNGVEQVWLPAAQAIVDHLAQKAD AYRDKAMLSLTHGQPATPTTLGKELAVYVYRLNRQLNKVKAQEYLGKINGATGTFGAHLA ACPDVDWVAVSREFVTNRMGLTWNPLTTQIESHDWQAELYGTISHTNRILHNLCVDVWMY ISRGVFAQVPVKGATGSSTMPHKVNPIRFENAEANLEISCSLLDTLSATLVESRWQRDLT DSTTQRNIGSALGYSLLALNNLMGGLNSIHPNDVAIQAELDSNWEVLGEPIQTAMRACEL AGLPGMDKPYEKVKELMRGHEISKDDVERFIDQQAFDEATAARLKALTPATYTGVASKLV DFDR >gi|148337405|gb|DS264454.1| GENE 717 799798 - 800970 876 390 aa, chain - ## HITS:1 COG:no KEGG:BAD_0555 NR:ns ## KEGG: BAD_0555 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 390 130 519 519 741 99.0 0 MLRGLFMSSRESAILALTASALMGVRRSYAKEGKFNKFYLVESTAWMQESFVSVLGEHAS RLNIQERPSKDTSILEYITKTLFMVTKPGAAIAEGLSGKGSVNRGLKKIDRLLIPYFDKD HGDNLSVTRVYPKTKVVRGGTSTKDAIADQRRLSEGPLNGERESGLEYGTIACCKYRKAD GTYAWRIIIPGTDGNHDSPMDWYTNFELMSADERQRGTAESLRFLDETMKQAGIQPDDPV EIVGHSQGGIIAAAAATDFQDKYDIQHIATLGSPIANFEIPEKTRVTAIEMDDEGIAALD GEANPHTENWLTIRCSVHEEDAPKRAFPGAEVSDSSGEKNSTHYPKYHEAGYRYAYDTGN KSVLDHDRHFQEVVEGELEEVQYYEGRISK >gi|148337405|gb|DS264454.1| GENE 718 800969 - 801214 100 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIFSPFLLASSAWAYKDWACAINEDSSLSWDAMDCRASACASQRPSSCRYGNSIWSCAVH RGLAPVKADRSGVARGWILSS >gi|148337405|gb|DS264454.1| GENE 719 801354 - 801557 120 67 aa, chain - ## HITS:1 COG:no KEGG:BAD_0556 NR:ns ## KEGG: BAD_0556 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 67 43 109 109 91 94.0 8e-18 MINAKLVTASRLLDGLDAAIASNRLADWTGTAAEEYRTRLDRIARQSALLRDDMIATSRL LWSAGAA >gi|148337405|gb|DS264454.1| GENE 720 801726 - 801929 109 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVKERVYEKPSACRYWKNNENHVDGMWITIFEKAPYQGLVCEDDVLGFFFAAEPESSLGS DCVDWAF >gi|148337405|gb|DS264454.1| GENE 721 801830 - 802402 591 190 aa, chain - ## HITS:1 COG:no KEGG:BAD_0557 NR:ns ## KEGG: BAD_0557 # Name: ebpS # Def: cell surface elastin binding protein EbpS # Organism: B.adolescentis # Pathway: not_defined # 1 190 1 190 190 235 99.0 9e-61 MTRTTMKPRASLTVRIVLAVMAALLVMAALWAIVNLAAVNSYNQATQSLQENISTSRKDD ADWDKLHTRQQQTDAQFNEASAMKPLLLPQVRESIEHNSHVSSQLTDHASKKIKAEQSDQ SASTDSNTADAQESGKSSHKNDENLSDEQRRKIEELLAQNAQSTQSDPNDDSGSAAKKNP STSSSQTKPW >gi|148337405|gb|DS264454.1| GENE 722 802399 - 803418 815 339 aa, chain - ## HITS:1 COG:no KEGG:BAD_0558 NR:ns ## KEGG: BAD_0558 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 339 1 339 339 579 100.0 1e-164 MNHLTLSPALGWPVGGAVAVVLLACAIAQIVLHVRRRADSDETVWACVRRVLLCLTVSVM ALTPSIVAPTNSRAVNATDVVVAVDVTGSMAVKDAQYGSAEQSSRLDVAKQAVKDVTALY PNSSFAALRFGASGTLDVPLTPDSNAIDNWADTLAPEATSVSAGSTLDAPIDQLLLTCKS IHDQHPDDAIVLYLFSDGEQTSSKARRTFSSLRRYLSDAFTVAIGSEQGGNIPVIADGVD GNADQWVTDPDTGKPGVSRMNKDEMASIADELSGTALVLNASNTMRDGVSKEASDKWRVT QTTKKRTRTMPVVWPLAIVTLLLLACELGAWIIQSRSLL >gi|148337405|gb|DS264454.1| GENE 723 803415 - 804482 723 355 aa, chain - ## HITS:1 COG:no KEGG:BAD_0559 NR:ns ## KEGG: BAD_0559 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 355 1 355 355 617 98.0 1e-175 MQLSWHWPWVFLAGVIVVLAVAGVTLLVAARHKTDDIESARTFSLDDDLNTESASRLFRQ WRVLSRLAVILLVVALALATALVARPSTVDEGEEKASSRDIVLCLDVSGSALPYDREVID TYRQLVDSFKGERIGLSIFNSTSRTVFPLTDDYELVSKQLDKASSILAGVESQDDIDKMK DSDYQAISDWLEGTQNRKESTSLIGDGVVSCAAMLPGFAYGNASADNAERQRAASIVLAT DNVVSGKPTYTLDEALNLTKQAQITVDGLFSGPKQSEADETTQEFKSAIEAHHGVFLTQS NGASVSSLVKEIESRRNHENESSNKAAMVDAPGWWTLALAIVLMVWLALAWRLRR >gi|148337405|gb|DS264454.1| GENE 724 804483 - 805007 385 174 aa, chain - ## HITS:1 COG:no KEGG:BAD_0560 NR:ns ## KEGG: BAD_0560 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 174 1 173 173 280 100.0 1e-74 MMLFLAEDDLVIKDQIHLENGLAVVIAVCLLLAVVLVALVVWLARPSRKPAKIVNRGRHD ALAGKTVWHQRIDDVVSRHARGELEREEAFAQLAAIARDFASTATGTDVRNQTLTDIEET PRTTGNQQGLTLLRQTIEALYPPEFADAERNHIARQATVEQAGEWVANLVERWR >gi|148337405|gb|DS264454.1| GENE 725 805004 - 805957 552 317 aa, chain - ## HITS:1 COG:no KEGG:BAD_0561 NR:ns ## KEGG: BAD_0561 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 317 1 317 317 585 99.0 1e-166 MIDQIRSDDPIRRKIETLGTTLSLPTVRKALGILEGAHASNKRFGADDVVDIHAYEPGDE AKRIDWKTSARAGRPMVVQRERPSTSKAWLLLDVGQEMTATCPSSEQAYQVAANALCMFA ALSLRRGDEVSMVFGDSASITRVPFNGGLAQFERTLDTALQREWTRPRNIDALLEYARRI RDKEALVVIATEEHALEERHLSAIRTIARTHPMVLIDVATINPFDVSHARVVLDGAGKRR VPAFLRRGNTAGQVRTHREYLAASIRHELNRCGSTVIRSDSSERMFHEFVRMVSTALAQS TRNQLRAPSVLSLGDKA >gi|148337405|gb|DS264454.1| GENE 726 805954 - 807021 1013 355 aa, chain - ## HITS:1 COG:BB0176 KEGG:ns NR:ns ## COG: BB0176 COG0714 # Protein_GI_number: 15594521 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Borrelia burgdorferi # 31 355 17 337 337 257 41.0 2e-68 MALFPPKNPAPAPAPIPMPAAARPTTLSAEDIARARNIGSQIRGRFAQTLVGQDNLRESL ITTLVAGGHILIESVPGLAKTTAAQTLATSVSGSFKRVQCTPDLMPSDLVGTQVFDFATQ KFSTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAEGATTIGGQRIALPKPFMVIATQNP IEEEGTFNLPEAQMDRFMMKAVLTYPTAQEEQRMLAMLTRRGSDTVDQHALTGDTVSISD VEFLRSAARRVHVSDAIMQYAVNIAATSRGAGTKPVQGLSSLVRLGASPRASIALVRIGQ ANALLQGRDYVIPEDVKAFAHEVLRHRILMTFEALADGVTSDQVVDSIVQAVPVP >gi|148337405|gb|DS264454.1| GENE 727 807040 - 807744 471 234 aa, chain - ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 5 232 4 227 227 280 62.0 1e-75 MTHIKPLKDLVEPGWAQALADVEPQIHLMGDFLRSEIAAGRKHLPASRNILRAFTIPFDD IKVLIVGQDPYPTPGHPVGLSFCVAPDVKPIPRSLANIYTELTDDLGVPMPANGDLTPWT KQGVMLLNRCLTVEPGKPGSHQGRGWEVVTDAAISALNNRRRPDGSVKPLVAILWGRKAQ TLEPLLTNAFIIKSPHPSPMSARYGFFGSKPFSRANQALIEAGEQPVDWTLPSA >gi|148337405|gb|DS264454.1| GENE 728 807897 - 808595 739 232 aa, chain + ## HITS:1 COG:no KEGG:BAD_0564 NR:ns ## KEGG: BAD_0564 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 232 6 237 237 366 100.0 1e-100 MAKQDKETYESYAKDMFDNPPAGPMGVHRGARSMASRALPYVIVVIVALLAGLLFWGVYS GEISNLRMPWSAKEDSSSSVSTADKADKKTDDTSKDAKTENKKSEDGKKTSTSDGQSKDA SDANQNAEQNNDQNNGQDAASEQSVNLATEIRVVNATSITGYAKSKADALTQAGYTSVTP SNPTGNVPSQTVVWYQNEADKATAENVAQTLGISNVQQSSGLVTPIVVVLLN >gi|148337405|gb|DS264454.1| GENE 729 808870 - 810486 1490 538 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 533 3 536 547 578 56 1e-163 MAKMIAYDDEARQGMLAGLDKLADTVKVTLGPKGRNVVLDKTYGAPTITNDGVSIAKEID LDDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVTAGSNPIALRRGIE KASEAIVKELVAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR FGLDLDFTEGMRFDKGYIAPYFVTNAEDQTAVLEDPYILLTSGKLSSQQDVVHIAELVMK TGKPLLIIAEDVDGEALPTLILNNIRGTFKSCAVKAPGFGDRRKAMLQDMAILTGAQVVS DELGLKLDSVDMSVLGTAKKVIVSKDETTIVSGGGSKEDVAARVAQIRGEIANTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALIQA AAKAKDDVKLEGDEATGAAIVFRAVEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAAT NEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPPAAAPAAGADMGY >gi|148337405|gb|DS264454.1| GENE 730 810591 - 810881 317 96 aa, chain - ## HITS:1 COG:no KEGG:BAD_0566 NR:ns ## KEGG: BAD_0566 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 96 1 96 96 102 100.0 4e-21 MPQYQVDSEQIQSSSAAVNASIQSIRQAVQGMYGNLNNLQSVWRGGAATQFTAVAEQWRA AQQQMEQSLESIQRALMQASTLYSETEMQASRLFAQ >gi|148337405|gb|DS264454.1| GENE 731 810894 - 811190 170 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSVAVMPNPALSSAWTGGVIHSIKHKPSTLASNMQIAIFQPFAVLPPFRDTPTEPKCIC SPTTAPFFSLHTLTDDIASTVPSGCANRDRMEKHTNHH >gi|148337405|gb|DS264454.1| GENE 732 811120 - 811854 621 244 aa, chain + ## HITS:1 COG:no KEGG:BAD_0567 NR:ns ## KEGG: BAD_0567 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 244 36 279 279 417 97.0 1e-115 MLWITPPVHADDSAGLGITATDDITDTQNLLGSNVSEITDAINQTKKETGVTVRLVYLDS FNAKGKPDKWVSALLESLNPKPNTVMLAVASNDGNLVVAVSSNSEEWLKKKSTVDALSDA AQNPLMESDPDWAKSATDMMNQISVQKKTSTSSRTIWIGVGGFAGALLLLVVLLVVLHIL RKKGVIGHRRKGRHSGRHGAVAERIQPVKEWGAESENEDYVNPDTASTQDSKSVQETSSE ASDA >gi|148337405|gb|DS264454.1| GENE 733 811858 - 812589 901 243 aa, chain + ## HITS:1 COG:MT0782 KEGG:ns NR:ns ## COG: MT0782 COG0745 # Protein_GI_number: 15840172 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 6 242 13 240 240 255 54.0 5e-68 MSKPIEASIVVVDDEPSIRELLVASLHFAGFEVNTAASGSEAIEVIERLQPDLIVLDVML PDIDGFTVTRRIRQEGITTPVLYLTARDDTQDKVMGLTVGGDDYVTKPFSLEEVVARIRA ILRRTQQQVEDDPIIRVGDLEINEDSHDVSRAGQPIDLSPTEYKLLRYLMDNEGRVLSKA QILDHVWQYDWGGDAAIVESYISYLRKKVDGIVIEDENGDKHKVTPLIETKRGIGYMIRA PKN >gi|148337405|gb|DS264454.1| GENE 734 812598 - 814445 1429 615 aa, chain + ## HITS:1 COG:MT0783 KEGG:ns NR:ns ## COG: MT0783 COG0642 # Protein_GI_number: 15840173 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 46 595 9 484 485 189 30.0 1e-47 MSKNPNSPSTGHASNPSAIPAPMQPPRSLPKQNKVWSRFTRRIQAIPLSTKLVTCIIVLL TIGTIGISFSIRTLVGNYLLQKTDTQLINQAQLIFNSMDSLSSDTGDDGRSLMNTYYVEV RDSEYKSTGAGSVPMLRDGVVSEPSLPADGSIDGVTLGQPFTTRAVVHITTSRTPDHSIM QAAQSPWRVVALPWNEKTRTGQVKDSGVVFIGLSLSDQIDTVNTLTRFCAMVGIAVVLIG AILGTILVQSTLAPLKRIEKTAAKIAAGDLSQRVPDLPESTEVGSLSMSLNTMLTRIEES FHAQEETTEKMKRFVSDASHELRTPLAAIHGYAELYKMQRDMPGALERADESIEHIEASS ARMTVLVEDLLSLARLDEGRGIDITQQVKLTFVVRDAADDLHALDPDRGISCGQVVLQPS TDMDHPAQFAFQNGQMPQIELKGDASRLRQVVTNIVGNIHRYTPADSPVEISMGVLPASI SPESLSRMPSNEQSLRHLVEAIEVGQSMQVGMNYAIVRFSDHGPGVPPEARSKIFERFYT ADPSRARQKGGTGLGMAIAQSVVKAHHGFICASGSEGTGLTLTVVLPIAPVEPKPQPITA SENRKNEKKNRKSKK >gi|148337405|gb|DS264454.1| GENE 735 814597 - 814989 327 130 aa, chain + ## HITS:1 COG:ML2147 KEGG:ns NR:ns ## COG: ML2147 COG1278 # Protein_GI_number: 15828153 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium leprae # 1 127 1 135 136 102 39.0 1e-22 MPSGRVRWFDANKGYGFIQTGESTDDVFLPAAALPEGVKTLRKGAKVEYSVIDGRRGPQA MGVTLVASAPSLVKATRPKPDDMAAIVEDLIKLLDSAGNQLRRHRYPSPAESKKLATLLR AVADNFDVQE >gi|148337405|gb|DS264454.1| GENE 736 814996 - 816408 1389 470 aa, chain + ## HITS:1 COG:no KEGG:BAD_0571 NR:ns ## KEGG: BAD_0571 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 470 1 465 465 634 96.0 1e-180 MSDTTMDPKAIAQAVAVTVSDEDGQVGDFVEAIDLGDNVTDFRFESRVRGYEGWQWSVTL YHDVELDHWTVNESSLVPTDKALRPPKWIPWKDRLEPGDLAVTDSIGTDPDDPRMEEGFR KTQDAETSDDTEDKPSVADETVQEPAMDGNASDESEKTDVSEDSEQPVTSEEDVEEAVEE FDLSRRHVLTPLGRSQTAKRWYEGPHGPKSLSTKTADGNPCSTCGFFIPLKGELNLLFGV CANKWSPDDGRVVSIDHGCGEHSEIDPPEPSHLWVQSKPAFDDMHIDIIAQAPRDERGSV ELIEQLSSDDDHNPNEDEEGSDADIEANTIDDDASQEDVLEHVASDDAPEVETTVTVVDE NKPETSDDTESADTAEPTESDEPVEQTEQVDSADSVNSAGSVEPVEQMDETVVEPTAETI EQTENKSMEDESVETESTEAESAETEPAAAETTESEMTEADSSAQAESDK >gi|148337405|gb|DS264454.1| GENE 737 816486 - 817493 993 335 aa, chain - ## HITS:1 COG:MT2061 KEGG:ns NR:ns ## COG: MT2061 COG0589 # Protein_GI_number: 15841487 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 19 333 10 291 295 80 29.0 6e-15 MSDTILQSNDVMDSRRGDIVVGVDGSDESFAALRWALGEASLTGQQVNAVYAWTHSWDMG SQPEDEEQWAQMRHDIARRLREWVAQASQGMTIDENRVKLTSVKATGTAALLEIGKDAQQ IVVGRRSLGRVARWFLGSLSASLAEEAKVPVTVVRILDDEEASVQDAIANALTPTEETVS YTMPGSPLPRNQRPVVVGVDGSETSKHALRFAIDFAALHHAPLQVMFCWQLKDLGVVKGY ENAVAPISVGQAQAERMLDELLDSVQVSSANIPDDFQIESHAFHIPASKGLIAASRYARH LVVGSRGLSGLDAHFLGSVSKQIINFADCTVTVVH >gi|148337405|gb|DS264454.1| GENE 738 817633 - 820227 2390 864 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens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gi|148337405|gb|DS264454.1| GENE 739 820421 - 821848 1801 475 aa, chain - ## HITS:1 COG:no KEGG:BAD_0574 NR:ns ## KEGG: BAD_0574 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 475 1 475 475 625 98.0 1e-177 MADENVTASENTTETNEQAATPATQASKPAVPSPAAMKPHAPSPAAFAKKAPQRPATSTG FSEADIKAAEAFGRVADDGTVFVKEGEGEREVGQFPDASKEEALALYARRYLDLTAKLDL FANRLKSSNVKNREIDESIKTLSAEIEQPAVVGDIEALKSQFEALKEAGAAKKAELSEAH KAAVAKALAERTAIVEKAEALANSLGDNTNWRSTADKFRSLFQQWQDHQHNSVRLDKADA DALWSRFSSARTTFNSARRKWAQGRDEERSNAKAAKEAIIAEAEEIKDSTAWMETSRKFN ELMDRWKKAGRAGRRDDDALWARFRAAADTFFNARQADREQISSSEKENLAKKEELLTKA EALVPVKDEKAAKQARQALAAIQEEWDQIGYVPRDDMHRIESRLDAVDKQIKAVEDAAWK QSDPEADARKSSFEEQLNAQLAELDAQIAAESDPKKKAKLEAEKATKEQWLNAIK >gi|148337405|gb|DS264454.1| GENE 740 821963 - 823354 1712 463 aa, chain + ## HITS:1 COG:XF2222 KEGG:ns NR:ns ## COG: XF2222 COG0124 # Protein_GI_number: 15838813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Xylella fastidiosa 9a5c # 1 440 1 444 466 246 38.0 1e-64 MAKGASISGFPEWLPSERVVEQRVIDTLRNVFELNGFIGIETRAVEQGSSLLKKGETSKE IYLLSRLQEVGHESDTPIEDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGER PQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALERLREFGLPKATVHANNRKLSE GFYRGLGLTDIEGVLREIDKLDKIGADEVAKLLVEGCGADEAQARACLELAELTAADGKE LSDKFDALCAKHDIASDSDAYVLARQGLDTLAMIVDEAARIRPGSVIADLKIARGLDYYT GSVYETFLDGAAALGSICSGGRYDNLASQGNKKYPGVGLSIGLSRLVSYMLHTAGAHANR VSPASVLVAVWNEADRSASNLIANQLRSRGIAADVAPTAAKLGKQIKYADKLGIPYVWFP ADASEEGAQDEVKNIITGDQRPADAQSWEPDTVYAQQTVTVEA >gi|148337405|gb|DS264454.1| GENE 741 823402 - 825201 2572 599 aa, chain + ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 7 594 3 590 608 729 60.0 0 MSQTAYRTHHATEVTEQLVGQKVTLAGWVDRRRDHGGVAFIDLRDNTGLVQVVIYDEEMA RPLRSEFVIQVVGEVRLRPDGNENEHLATGKIEVVAESIEVLAKSDALPFQVSTALENES ENKLPGEDVRLKYRYLDLRRPSMQRNLKLRAQMSKAARHALEEMGFEEIETPTMIKSTPE GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ LDMEMAFVDQEDVMAMAEKVIAAIWKSAGYDIKLPIQRITWQDAMDKYGSDKPDLRFGNP LIELTDYFKNTPFRVFQAPYVGAVLFKGGAATPRRQFDAWQDWAKQRGAKGLAYVVFAEN GELKGPVAKNLSEEERNGLKEAVGAEDGDAVFFAAGRRTSSQELLGAVRVELARRAGLLK PDDFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDKDPEHAMS DSYDIVCNGNEMGGGSVRIHRDDIQDRVLDVLGITPEEAADKFGFLLEAFKYGAPPHAGI ALGWDRTAAILAGADSIRDVIAFPKAGGGRDPLTGAPAPISAEQRAETGVDYDPDEDED >gi|148337405|gb|DS264454.1| GENE 742 825350 - 826900 1838 516 aa, chain + ## HITS:1 COG:lin0840_1 KEGG:ns NR:ns ## COG: lin0840_1 COG0834 # Protein_GI_number: 16799914 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Listeria innocua # 29 279 4 259 268 270 53.0 7e-72 MKSKTQDKKRLNAVGMRICALFAVLAVVFAAFMTTVPHALASETGNPASVKGKTYKIGTD TTFAPFEYRENGKMTGIDMELIRGIAKEEGFKVEIQSLGFNAALQALSSNQVDVVIAGMS ITDERKASYDFSNPYFQSGIQMAVAANNDDVTGYKDLKGRTVVAKTGSEGESYAKQHADK YGYKVTSVDQSSTMYEMVKSGNAVAVFDDYPVLAYGVSQNNGLKIVTPKVPHGEYGMAVN KGMNADLLAAINDGLNKMIASGEYERIVAQYLGKQGAKEQAKSISGMITDNGDNSAEQQK VGFLGLVKQSMPALLTGLRNTLLITLLSFAIALVLGVAFGLMKVSESKIAAGLANVYIAV FRGTPILVWAFFFYFGVPQLIGHSVNIWVAGALTLSLNSGAYLAEIVRGAVQSVDSGQME GARSLGLNHRQAMRRVILPQASKIAMPSIINQLVIMIKDSSLLLAIGFGELLYQAQQLYA ANFRVTETLLIVGVMYFVAITILTWLANIVDRKVNR >gi|148337405|gb|DS264454.1| GENE 743 826897 - 827637 549 246 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 7 245 1 242 245 216 45 3e-54 MNENDVIIDVKDLHKSYGQTEVIKGVDMTVRKGEVICIIGPSGAGKSTILRCLNGLEQAT GGKIVVNGHDLTDSHVNIDQVREQVGMVFQHFNLFNNMSVIDNITLAPKLVHHETDEQAR AHAMELLKTVGLAEKADAMPKSLSGGQKQRVAIARSLAMNPKVMLFDEATSALDPEMVGD VLEVIRDLAAKGMTMVLVTHEMGFAREVATRVIFTDAGVIEEEGTPDEIFNHPKSERLKT FLSKVL >gi|148337405|gb|DS264454.1| GENE 744 827772 - 828569 254 265 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 39 239 20 221 223 102 31 4e-20 MSEMKETEAKRPIMPDAGADNRPLVELTHVEKHYGDLHVLKDINLTVRKGEVLVIVGPSG SGKSTMCRTINRLETIDSGDIRIDGKPLPQEGKELASLRAEVGMVFQSFNLFANKTILEN VTLAPIKVRHMDKKAAEDLAMDLLGRVGVASQASKMPSQLSGGQQQRVAIARALAMQPKV MLFDEPTSALDPEMVNEVLDVMVELAHEGMTMLCVTHEMGFARKVADKVVFMADGQILEQ STPDDFFEHPKTDRAKDFLSKILTH >gi|148337405|gb|DS264454.1| GENE 745 828606 - 829448 1073 280 aa, chain + ## HITS:1 COG:Cgl1906 KEGG:ns NR:ns ## COG: Cgl1906 COG0834 # Protein_GI_number: 19553156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 6 257 1 273 295 187 42.0 2e-47 MKPLSITAKRMLRRAVAAFCACACVFAVSACGADETGKIRIGIKFDQPGLGFKKNGTYVG FDVDVAKYVAKKLGYSEDEIVWKESPSKQREAMLQNGDVDYIVASYSITDERKKVVDFAG PYFVAGQDLLVRKDETGIDGPKDLNGKRLCSMTGTTSAVNVKEKFAKQTQLMEQPGMAEC ATALLSGIVDAATTDDIILAGLASASRGRLRVVGKPFTQEYYGIGVKKGNTELKNKINNA ITDMIQDGSWQRAISDNTRGVAYTPNAKYNPPVPNGKGNK >gi|148337405|gb|DS264454.1| GENE 746 829448 - 830125 972 225 aa, chain + ## HITS:1 COG:Cgl1907 KEGG:ns NR:ns ## COG: Cgl1907 COG0765 # Protein_GI_number: 19553157 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 16 225 15 228 228 162 47.0 5e-40 MDGFLALFSQYNIPGAFLVNIELTLWSALFSTILGVILVMMRISPIASLRTVSGAYVELF KNLPLTIIMVFMVLGAYAQLKFSFSDTFATNFFWLAVTGLSLYTAAFVCESLRSGINTVP LGQAEAARALGLNFMQAATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSTM MSEMIEYHADQIVLIFLIFAFGYVVLIIPIGMLTTYLSNKLAVRR >gi|148337405|gb|DS264454.1| GENE 747 830132 - 831259 1422 375 aa, chain + ## HITS:1 COG:Cgl1908 KEGG:ns NR:ns ## COG: Cgl1908 COG0765 # Protein_GI_number: 19553158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 6 295 7 300 315 189 36.0 7e-48 MASNESAVLFDQPGPKGRKTIRIVNWIAGIIFAVVVVLILMRLHNPPDGENQLSWELWKP ALDAEAWTDFYLPGLWATIRASVLAVVGAVVFGLVFGVGRLLPSLLIRTISGAIVEFARA VPVLLLMIFFWRWFAFAGLPSPAYWAVVLALVIYNGSVVAELVRSGVGNLPNGQREASLA LGLTRTQSLLQIEVPQAIYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFN ILQTLVVAAVVYFIVCWLLSRLAEWLPSRMQQHTAAPAEPEPVAPIAIMDPSNVNQIAVA KEGVPLGGAQRVYHVHHRGTNASIHQWRQTRYAQGFDETHPESQVKFDKNGHPIKDNPFK TKGDGKDKNKSEADE >gi|148337405|gb|DS264454.1| GENE 748 831378 - 832379 1046 333 aa, chain + ## HITS:1 COG:all2088 KEGG:ns NR:ns ## COG: all2088 COG2326 # Protein_GI_number: 17229580 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 78 317 19 268 289 213 43.0 4e-55 MADKTKDAKKDDARMSSIAKTLNKVEDRLEKSENCDSVAEGLANAAKASELLSSVWTLPP TQLLRFHHDTKVSDIDGDSTPGFDGNKDDAERFISISSSEIARYQRLMYANGVKGSHRRL LIVLQGMDASGKGGIVRHVFSQGDPMGMHYHGFGAPKGEELDHDYLWRIKRELPNNGWIS IFDRSHYEDIVMPRIYKTQPEEVWQARYDEINRFESQLTADGCAIIKIFLVVSKDEQKRH FLSRLDDPTKYWKFDPSDLEARARWDDYMAAWQDVFLRTSTEQAPWYLVPADNRWYSRAV VSELLRNTLKNMNMIWPPLEVDADEMRRQLDTL >gi|148337405|gb|DS264454.1| GENE 749 832361 - 834919 3257 852 aa, chain - ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 9 852 6 849 850 771 47.0 0 MADDTNYGSLGALAPNWDEGERNIDTDEIYERFFTWVEDVKGVEPWPHQEEAIMDLLAGD HVILNTPTGSGKSLVALGMHFAALCTGRRSYYTAPIKALVSEKFFDLVEVFGRENVGMIT GDTHINADAPIICCTAEILANQALREGRHADVGCVAMDEFHYYGDPERGWAWQVPLLTLP DTQFLLMSATLGNVDAIADKLEDMTDTDVDIIADAPRPVPLTYEYTLDPLEKTVELAFGK GETPIYVVHFSQDAALETANALASTGVSSKEQRAAIAEAIKGTKFTTAFGKILQRLLRTG IGIHHAGMLPRYRRLVEQLAQQGLLPVICGTDTLGVGINVPIHSVVLTALTKFDGTKMRK LRAREFHQIAGRAGRMGFDTEGLVIAEAPEFEIENAKALAKAGNDPKKLKKIKRKKAPEG FVTWNENTFDKLIDAAPETLVPHMKITHSMVLNEVEQGGDARYRIDRLIDDSAQTPEQKE RLHARADEIFQTLFDTNVIETEDRDDGGKDYFMTVDMPDDFALDQPLSPFLLAALELLDP ESDTYALDVISMVEATLEDPKQVLRAQERQARDEAMIRMKEDGLDYDERMDRLQEITYPK PLEDMLQAAFDEYRHDVPWANDYWLSPKSVVRDMVETASDFTGYIARYNIARSEGTLLRY LSDAYRALARTVPQEKRDEQLGDIISWLRVVVRSIDSSLVDEWEHAGTDTDASEAAANLA APGAKQAVVEDRRGLTVLVRNAMFRRVQLMDLDKPDELGALDKDWGYGVHEWEDTLDDYY DEHEYVNIDAKARSGELFILDESKENSEHAWKVRQIIDDSDGDHDWAITGTVDLDATQSS GEVVFFDYSVSN >gi|148337405|gb|DS264454.1| GENE 750 834930 - 835190 85 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMELGAVSEPFEAGLASLRNGDPSPNTRDCPTTSSMLAGRMRTASGRVTSSGASIAANKS SVMLSTVPQHTQQFEHTFDACVRPNR >gi|148337405|gb|DS264454.1| GENE 751 835132 - 836403 1554 423 aa, chain + ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 18 407 89 468 473 385 54.0 1e-107 MRRLANPASKGSLTAPSSIILFGPPGVGKTTLAYIVAKQSGRVFEELSAVTSGVKDVRDV LKRAHERLVSEGKETVLFIDEVHRFSKSQQDALLPSVENRDVTFIAATTENPSFSVIKPL LSRSVVVKLESLEPDDLKTLINRAIASEHGLDNEIRITDEAVDEIIRMAGGDARKTLTIL EAAAGALTGDKERKKGAKRPIITPDVVSKVMDVATVRYDKDGDDHYDVISAFIKSMRGSD PDATMHYLARMLRAGEDPRFIARRIMIAASEEVGMAAPQVLQVTVAAAQAVAMIGMPEAR IILAEAALAVATAPKSNASYNAINAALADVDAGLIGQVPLHLRNAPTALMKSWGNHEGYR YAHDWPGAVAPQQYMPDELQGREYYHPNDRGYEHEVKPRLERIRKILHEEDDNGDGRSGQ RNA >gi|148337405|gb|DS264454.1| GENE 752 836542 - 838053 1934 503 aa, chain + ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 34 488 9 443 454 231 36.0 4e-60 MKERNTTLETTDHNNRNNSENIKETPDERIPGKLIGAIVAVGSLAFIGILTETVMTVLFP QLMREFNVNTATVQWITTIYLLTVAATMPLSSYLNRKFKHRVLFLAAVALAVLGSLTMIF GHAFPVILVARIIQGIGSGVATPLMMNIILEQSPRSKVGRLMGVGSLVITVAPAIGPTVG GAVSSILPWRAIFVIVIPVILLISLPVGLKCIEQHRPTEEAHLNPLQFAAIVLALCGLVM FLNQAGVAVAAAVSGGVATAPAIFAVISLIVGLGSLFFFGWSSRRSFSPLIRLGWLRDPM VLLHLIAYMLLPIVGIGFGYVITNLAQLSLGTNAFLAGALVLPGALIGAFFAPIGGTLYD RFGPVRPILGAFFLAICGPILLLVFSMRLTPATLAGFYFIFGLGYALGFSNIMTNALRSI APQFMPDGNAVFNTCLQFGGAAGTALFSTVLSVAQAGAGKEGTEAFSHATAVGGSWTFTV MIVIVAVAICCLITAFRIGAKRE >gi|148337405|gb|DS264454.1| GENE 753 838159 - 838779 845 206 aa, chain + ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 11 195 6 189 197 226 58.0 3e-59 MSNLSAPLPVMAGEDMPAGPTDPIFNRLLKDRIIWMGEEVKDEMANRICAQMLMLAAEDP KKDIWLYINSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTS HARVLMHQPSGGIGGTATDVRINAELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFT AQEALEYGFVDKLVSTHDTMSATKGE >gi|148337405|gb|DS264454.1| GENE 754 838782 - 839483 1067 233 aa, chain + ## HITS:1 COG:MT2535 KEGG:ns NR:ns ## COG: MT2535 COG0740 # Protein_GI_number: 15841984 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Mycobacterium tuberculosis CDC1551 # 29 232 3 207 214 240 62.0 1e-63 MASEEAQFVARAERLAGPTGVVGFQRAAAREAAFAPQNRYVLPQFEEKTPYGYKRQDPYT RLFEDRIIFMGVQVDDTSADDIMAQLLVLESQDPNRDVMMYINSPGGSMTAMTAIYDTMQ YIKPDVQTVCLGQAASAAAILLAAGAKGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAK EMLRMREWLENTLAKHTGRDIEKIRKDIEVDTFLTAQEAKEYGIVDEVLEHRS >gi|148337405|gb|DS264454.1| GENE 755 839588 - 840901 266 437 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 187 416 267 444 466 107 33 2e-21 MGRVVSYNDAVPRCTFCGKSENQVRKLVTGSGAAICDECIELCVDIISEERDKDAQLNIL QLPKPAQISAYLDNHVIGQESAKKTLSVAVYNHYKRVNMEMRESSRIGKERMHGHDDSFE GVQVAKSNILLLGPTGVGKTYLAQTLAHVMNVPFVIADATTLTEAGYVGDDVETVLQRLI QAADGDVARAQQGIVYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTVASVPVE GTRKHREMETVQIDTRDILFICGGAFVGLADIVAQRLGARESGFGAAWHDHEVPKRELLA QVSADDLADFGLLPEFIGRLPVVSVLEELTEDDLARILVEPENALVKQYQKLFAVDGVTL TFTEGAIRQIAATSIRRGTGARGLRSIIEKTLEDTMFRLPSMEGVEEVVVDEAAVTGSGT PKLFKVSTQKIPRLREA >gi|148337405|gb|DS264454.1| GENE 756 841370 - 842731 1391 453 aa, chain + ## HITS:1 COG:HI0225 KEGG:ns NR:ns ## COG: HI0225 COG3004 # Protein_GI_number: 16272188 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Haemophilus influenzae # 12 409 17 398 400 211 33.0 3e-54 MATSKRGTWATIRRIAASDRISGLIMLGFALAGLLLANLPFTAHAFEQLENFRIAIPHTN IDMGLGHWVQDGLLTVFFLTVGLELKQELTTGSLSNPKAAAVPMLCAVGGMLAPPVLFIG VISLFAAAGSGQLVIASGTSFSFAQMSNGWAVPTATDIAFSLAVLALFAKALPGSIRAFL MTLATVDDLLAIILIAVFFSSVNAWYWFLGIAVCAVVWYFLVRMRKVPWLAVAIVGVLAW VMMFEAGVHPTLAGVLVGLLTPAHERFGEKMPRAERYADKLQPFSALLALPIFALFATGV HFESLTLALFVSPVVVAVMVALVVGKPLGIMTTAWLSTHVGGLKMAKGLRVRDMFPAACA CGIGFTVSFLIASLAYQDAELSAEARFGVLVGSMVAAVISGILLSHQSKRFELEDGTKHK HHTGDEDAMNEVETVLEDGTVVVSQIIGTHQEQ >gi|148337405|gb|DS264454.1| GENE 757 842827 - 843498 653 223 aa, chain - ## HITS:1 COG:ML1075 KEGG:ns NR:ns ## COG: ML1075 COG4122 # Protein_GI_number: 15827525 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium leprae # 24 223 32 224 224 79 30.0 6e-15 MDRTSYTNLAKSWEYVEDHAFSRQSAELNAIRTAAEEAGIPQGSAAQAELLRMLVRMLDA SSVIAIGTGSVVETMQLINGLDNAGQLTAVDSSTQGIALIRKLFNRLSDDTETTLRAVNA SAGVFLPRLNAENYDLIVVAGDPENYAAAFAQAPRLLKPHAAIVFTDVLAFDSATSAGGV LNPANRDAKSIAMRELLETVESDERFVTALTPTGTGLLVAVKK >gi|148337405|gb|DS264454.1| GENE 758 843500 - 844417 919 305 aa, chain - ## HITS:1 COG:MT3420 KEGG:ns NR:ns ## COG: MT3420 COG0479 # Protein_GI_number: 15842911 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Mycobacterium tuberculosis CDC1551 # 57 298 46 255 263 156 34.0 5e-38 MSGMENGMETVTLRVNRFTPRPERGRERGGSPFARKSSPFGDSGSTRRRPRGKQWVQDYA VPARPEDTVLDCLLKVKRTIDPTLAFRYSCGHGMCGSDAVSINGTPTLLCTATVKAWAKQ PSDAQVDEDGFRHTGEDVQPAQTQDADDLGVIELAPLPGFPVQRDLIADIDQMLDQIRKL KPYLQASGELATTADGKINAFEYLQNPQQLAKYELLSNCIACGTCEGSCPVYAGGEAFIG PAALIAASRFINDSRDSQTDARMDAIDSADGIAACQSVRACTRECPRGIDVGEEIWQLIA QIKER >gi|148337405|gb|DS264454.1| GENE 759 844476 - 846332 1820 618 aa, chain - ## HITS:1 COG:ML0697 KEGG:ns NR:ns ## COG: ML0697 COG1053 # Protein_GI_number: 15827293 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Mycobacterium leprae # 48 618 33 584 584 448 43.0 1e-125 MSPKHVEDMYDAVIVGAGAAGLSAALGMLRSERMRQMRADGIEPNVLVISKLQPLRSHTG SAEGGIAASLGNVEKDDWHWHYYDTVKGGDWLVDQDAAKLLAEQAPATVIALEHAGVAFS RTDDGHIAQRRFGGHTKDFGKEPVRRAAYAADRIGHQILFSLWQQCVAEGVEFAEEWYVT DLVVSEDHGKVEGVVAFDTHKGETHAIHARNVLMATGGAGRLFHTTSNSWDLTGDGMALT LSAGLQLEDSEFVQFHPTGLAHTGILLSEAARAEGGVLRDSDGEAFMEHYAPGHADLAAR DVVSRSIMAEIDAGRGIADPKNPDGPKDCVWLDMTGIDADHMHEVLPQVVETIEQYADLD PTRDYVPVKPTAHYTMGGIPITTDGEVYRWVDGERAVVDGLFAAGECSCVSVHGANRLGG NSLLDACLFGTRSGKAMAERVVDNPVNDPMAEPADEASIDAVSQAADKRSAQVKELLTRP SDDDDASSDNPYQLMADLGSVMEQAVAVRCDRNSIEQALATLDDTLTPRAEALHAHSDSP TFNQEITAIWEVRHLLELGKAVLAASAARHESRGSLKRLDFPERDDEHFLAHSMTDVSCQ VSWQPVHIVDMPPKAREY >gi|148337405|gb|DS264454.1| GENE 760 846401 - 847702 1031 433 aa, chain - ## HITS:1 COG:VC0048 KEGG:ns NR:ns ## COG: VC0048 COG0758 # Protein_GI_number: 15640080 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Vibrio cholerae # 95 341 56 285 371 138 37.0 3e-32 MVTIDDETLARAVLTFCLDSADAMMYALVKGTGSAASALQLIADSGPGNHENVTAAACTS LDAAFINGVTRWGRTINARGMASFHGSLVSWQQRLASLPSKDPDALRDWFTADGTQWIIA PHHPCWPSQLNDLSLRTDWASPLCLWGKGDPKALVSCPEPVGIVGSRGVSDYGRQSAHEL ALRMARAGHLVVSGGALGTDAAAHWGAVKAMDEMSAALAGRTVAVFAGGLNHIGPKSNQN LFEQIESHSGALISELCPGTVPEARRFLLRNRLIAALSSTLIVAQARARSGALNTAGWAN ELNRNLFAVPGDITMPHNTGCNRLIQDGRATIICSLAEIDELCHSAHRPQHVDLPDDTEH PQESTDESDDAILAAIKTCAEANGHVSADDLLDLMDKTHPGEYPISRIMRELGSLELEGR ISMRSGWIIAEQR >gi|148337405|gb|DS264454.1| GENE 761 847702 - 849231 1018 509 aa, chain - ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 1 505 1 497 503 400 44.0 1e-111 MAIGSALSVGLIGLKAFIVQIQAFVSPGLPYFSIIGLPDTSLSEARERVKSACQASGFKW PETRVTVNLSPASMPKKGSSHDLAIAASVLSAAGAIAHDCLAGTIVLGEVNLDGTVLPIN GLLPIMLHAREQGIATIIVPYANLDEARLVPDVKAIGVRHVGELIELMGGDADYRIPEAT HAVNADVGATGMCPPPGDMSEVMGQQAAKWALEVAAAGGHHLMMTGPPGTGKTMLASRIP GIMSPLNETEQLEVASIRSLCGTLPGYGISDVPPFEAPHHTASTAALVGGGAGLAQPGAI TRAHRGILFMDEAPEFSARTLQTLREPLESGYVAISRAKGTTYYPARFQLIMAANPCPCG YAYGNGERCTCREKDRVKYFSRLSGPILDRIDIQIEVPPVERISPGNAPSGDSSHAIRLR VIVARQMAQERFREFGWCCNAQATGTWLRANTSPKAIELVNRALASERLSLRGADRAMRL AWTLSDLAGKTSPGPEEMMQGISMRTRLA >gi|148337405|gb|DS264454.1| GENE 762 849231 - 849683 292 150 aa, chain - ## HITS:1 COG:MT2966 KEGG:ns NR:ns ## COG: MT2966 COG0792 # Protein_GI_number: 15842441 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis CDC1551 # 31 148 19 139 141 84 43.0 8e-17 MNHSSSHDVPAPTQPPEQILDSLARRLHDGTLRSRQIGELGEQYAAAWLESQGWRTLDRN WHCRYGELDVVSRNPMGQIVFVEVKTRRTMRYGTPQEAVTASKQINLRHAAVQWLTAPEH RMPNSGVRFDVVTVVVQGDRPLLHHIEGAF >gi|148337405|gb|DS264454.1| GENE 763 849853 - 850728 837 291 aa, chain - ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 12 285 3 278 290 174 34.0 2e-43 MSDEILYDRDPRYIPRVAAVHDMCGYGKCSLTAAIPILSAAGCDVCPVPTALFSAHTRYE VFTFHDTTEILDGYLDAWRQENVDLDGVYSGFLGSADQVAIIKRLYAEYPHALRLVDPVM GDGGEIYATYTPELCRAMGTLVDGADALMPNLTEASILTGRDYPGQDIDDAQVDEILGAL LAAGAKNVVLKGIDRGDGMIRNYVASASTGVAGKQELAHAKLPFMTHGTGDAFASALCGA VMAGRPLAEAANIAGEFVRHAMESTQYQPNHEERGVSFELNLDELTALTRR >gi|148337405|gb|DS264454.1| GENE 764 851059 - 852369 2074 436 aa, chain + ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 1 429 1 426 426 495 58.0 1e-140 MANKNYRFETLQLHVGQEQADPATDSRAVPIYQTTSYVFHNFDHAEARFGLADPGNIYGR LTNSTQGVFEDRIAALEGGTAGLAVASGAAAVEYAVRNITQSGDHIVAAKNVYGGTFNLL RHTLPRDGITTTFVSAENPQEFEDAIQENTKLVYFETFGNPNADLPDFEAITAIAHKHHL PVIVDNTFASPYLFRPLEHGADVVVESATKFIGGHGTTLGGVIVEGGKFNWAEVPGKFPT LTEPDPSYHGLNFYEALGGAAFVTRVRAILLRDTGATLSPFAAFLLLQGTETLSLRVERH VQNALKVIDYLKTVPEVESISHPSIEGRKDNDLYKKYFPNGGGSIFTFDIKGGKDAARVF IDNLHLFSLLANVADAKSLVIHPASTTHSQETLEELEDQGIHQGTIRLSIGLENIDDIIE DLESGFKALRESGLAK >gi|148337405|gb|DS264454.1| GENE 765 852603 - 853154 909 183 aa, chain + ## HITS:1 COG:SP1597 KEGG:ns NR:ns ## COG: SP1597 COG4720 # Protein_GI_number: 15901437 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 11 166 2 151 153 100 39.0 2e-21 MAQDVKNDIKKAIQVNTIPLIAIMTAVTTVLTMFVKIPTPTRGYLNLSDTMIFFSSYAFG PWVGGIIGGLGPALSDLISGYPQWAIFTFIIDGLQAVLVGLLVREFKPANVVIGSLVAGV WKVFGYFIAGGILSGFGPALGEIIGNSFQMVVGLIVGFALFSAVRKAYPPLVRLGNLSVK AGE >gi|148337405|gb|DS264454.1| GENE 766 853312 - 854937 441 541 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 21 500 25 503 563 174 28 8e-42 MITVRDLSWQYEPLVDGGKPVDSLKHVSFDIKSGSFVGVIGPTGAGKSTLCMALAGIIPN LADGTMTGLVEVNGMNTSRHSVSALSERIGYVQQDPEAQLFCASVEDEIAFPLENRGIAP DIIDKQIDVMLDLVGMTGYRKRVPTSLSGGQMQRVAIAAALAAEPDVLILDEPTAALDPE GKQEVFDVLERIRQTRSMTVIMAEQDTEHIAYWADQVLFMVNGELVRNGDASLFVREKGL LESSGVQVADDPLPQVKAVQQGKKHKKDKKNQPERSKDVVISLDHVSYQYERGGNASKAL DDVTFDIERGSFIGLIGRNGSGKTTLAKHLNGLIRPTQGTVTVDGLDASKHSVGEMAAHV GFVFQNPDHQIFCSTTKEEIAFGPTALGLDGATVFKRVDEMLTLFDLHRYEDVSPATLGY GERRAVALSSVLAMRTPILVLDEPTAGLDHRLAARFLGTIEKLNQRGVTIVMISHDMRAV YRYCTHVLELEDGKVVQYGPIDRSEAAQKQSRTIRKPRKSNGPVSATHVLLKVTKHEEGR H >gi|148337405|gb|DS264454.1| GENE 767 854937 - 855749 1130 270 aa, chain + ## HITS:1 COG:PH0131 KEGG:ns NR:ns ## COG: PH0131 COG0619 # Protein_GI_number: 14590075 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Pyrococcus horikoshii # 1 256 1 231 249 99 32.0 6e-21 MDADLYVPGDGWLHRADPRVKFLITVVMLVLCLVWRNWAFILDVLIIEHLMLITDGVPLK RIGWVWKILAVIIVFIVVLWPIFDPSGTHVLWQWGWLKLTRENLVMAAVMGLRIPALGFA CFLTLFTTSQTKLIRGLTSLGMPYKAGLTLATALRYIPVFFSIFQSVSAAQRARGLDLSG KKDATGKKRNVFVRLVDRFKSYLPIIIAVLIRAYKMSQSVGWAMESRGLNLQGVRRTYRI QLKMRLSDWIILAVTVAATAGSIWLMLWQF >gi|148337405|gb|DS264454.1| GENE 768 855759 - 856778 860 339 aa, chain + ## HITS:1 COG:no KEGG:BAD_0602 NR:ns ## KEGG: BAD_0602 # Name: not_defined # Def: regulatory proteins # Organism: B.adolescentis # Pathway: not_defined # 1 339 1 339 339 638 92.0 0 MFQNEQRITITARDLKVVSALQCDGRMTMQALADKIGISVYAATESYRRLIESGIMNIVP VCNPLSLGNYSQVLVGLRLDGSRDEALAMLQSMPQVTYVVCALGDADIIAEAVVYSAEGM DHFLKHGLRALPGLSRLQVFSCGRLVLDDHNVSVVNRLLAAHGETGFLTKREASVGTDIP SHRLDPRFVHTFNELQKDGRASYASLGERLGVTHTAIRGRIKKLEDSGVMRIMATVSPMR LGGFRQAFLGLGVKPPYRLDSEQLLAIDEVTYAMSGVGLNGADYLIEIIADNDEDLWRVV DESIRPLPGVEQTWWASTVSVEKESYWLEPPHEGVLLGD >gi|148337405|gb|DS264454.1| GENE 769 856952 - 857743 252 263 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 30 230 35 241 329 101 32 7e-20 MDIRDAIKANNTAIEAIDLVKDYGSGSNAVHALRDVNIAFEQGKFTVIMGPSGSGKSTLM HTLAGLDSATSGHVMFDGKDLTRMNDDQLTLLRRHQIGFIFQSFNLLPMFTAEQNILMPL TLAGAKPDRQWLRLLVETLGLKERLNHRPNELSGGQQQRVAIARALITKPKLVFADEPTG NLDSVSSAEVLSFLKRSVNELDQTIIMVTHDAVAASYADRALVFADGQIVADVSKPTADQ MSELLMKEREAATMNAASARDSR >gi|148337405|gb|DS264454.1| GENE 770 857785 - 860427 2384 880 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 1 879 7 853 853 216 25.0 1e-55 MWSITLKLMRKTKRMLIPAGIAIMIGTAFIASTFLFGNAMNDSLTRQMTAMFGNANYAVT VNSSDLSDEELNEAYSSTVGDFHLDQIAGIEGVDGVRASVETGVSVSRGDSAISGEIIST AAQKNMLPVSITEGDQPKDSNEVALPEDMAKQLNVGIGDTVRLTSQYAVGTDGKAKADNV RVVGLTSDPNGAYSYYGGAIVGSNNLLAAMQGTDDFDTTGTTTVYLDLALDGNSVSAKTI NSVKALLPKHFDLMSRQQVSDESIKSLAGNQTSIVTTFLMCFGVLAMFVAALVIANTFQV LVAQRRRTLALLRTIGAKKGQLYGSVLFEAAVLGFVASVLGVVLGSLLMWGMCVSDIMQE GMRFNFSWQAAVIPILFGIVVTVLASLGSARSATAVTPLEALRPIELTDNRRSSLTRAII GILMVVVGIAMVVFSIWQVQATNGGENASSDQFTMILLVAIAGAALVFLGMVVTAVFWMP ALMKGVGALASLTGPSATVAHANIQKNPRRIAATGAALLIGVTLVSTIATGAASAKETMN GALATRYSVDIVAMGDDISQQMVKDVADINGVSDTLYAPAVSVTLEKADGTQPTSALLVG VKNIDQVKQVMRANLGNASIDSDGVLMPTYNAQTGKELQFANGTADFSTEWNQDGDATRS LTLQANQADYRRVSAQYGAVGFVDESHFTNGDLDAATHVLLVKADTDKSGVSVDGIYNDM QAALEKSTDATVTGPIAERIVWAKMIDSMMMLLVGLIAVAVLIALVGVANTLSLSVIERT RESATLRAIGMTRGQLRRSLAVEALLISLVSGIAGVLLGTLFGWLGAYVVFSLYGTVAFP FEWGINGIVLAVAAVAALLASIAPARRAVRVPPVEALAEA >gi|148337405|gb|DS264454.1| GENE 771 860469 - 860570 67 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLLSKEHSVYRLSFCERLNRPNRKAGSLVGFP >gi|148337405|gb|DS264454.1| GENE 772 860601 - 861350 766 249 aa, chain - ## HITS:1 COG:BS_yxjL KEGG:ns NR:ns ## COG: BS_yxjL COG2197 # Protein_GI_number: 16080942 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 4 249 3 217 218 172 45.0 4e-43 MSEEQKIRVVIADDQELVRAGFAMVIGSQPDMAVVGQARDGAEAVALAETLHPDVVLMDV RMPGVDGIEATRRISALQHRFAPDGSALDDAHTRVIILTTFDLDEYVMAAINAGASGFLL KDTEPETLLNSIRTVYQGNAIIAPSATKRLIEKMMDGDFAGTAAAAPVSAMSASASTATM YTDPELDELTDREREVLIEIAHGLSNQEIADKLFISLPTVKTHVAHILSKINARDRVQAV VFAYENHLV >gi|148337405|gb|DS264454.1| GENE 773 861427 - 864036 1211 869 aa, chain - ## HITS:1 COG:all4636 KEGG:ns NR:ns ## COG: all4636 COG4585 # Protein_GI_number: 17232128 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Nostoc sp. PCC 7120 # 188 439 149 396 401 91 27.0 6e-18 MSNLKQRLLSWMHGHVFAGDLIITLAIGVLLFGVTGSITYNPGLLFDLKPSTQMAWEAAM LIPLLIRRWWPQTGALLCVAWTLAHLIFGPCLLGADILALFMLYSVIVYGNPKNTKAFII LALIIGLLASALVAWTMTNGPLLTGGKVHTWSSWNDPNPNGVMVTKDTLGSIYTGTSMSE VADMMAQYMLVLTPIFEVCIISTVIVAFWQRARLATVCMMRERNEAIAARDQNERDIAAL AERARIARDMHDVVAHTLSIIIVQSDGGRYAGTHDPAVARNTMETIRHESERALHDMQRL LGVFGGSPHADYNDIGNLVEQAQNVSPDIRIRRNITGTASPEQLGEQASIASYHVVQEAL TNIRKYAGPHVDVHIKESWNNGLLTLTITDNGHGAAANIDGHTPGYGLLGMKERIESAGG SLQAGPQLGGGFEVMATLPYGGKEQVTEETGEQYASEQSEFCNTTAISSKAKLSDEAIAP HTVVNISARIPDQPSERTQETNQPTGRDHRSNALQHLRITAPNLHDLLKSLKLKSVELAN TSNSRGLNWVERVSAWTQHHYALMDSVGAVALVMLLNRMSVTFFFDSSPHAQLSNAIAAC CLLALALRRRFPETCALIVFVLSVVQLVFLGSIEVGHIVASLCALYSAVLYGREHAWRWT GLAAATCSVLMGLKIAADQHGYITLFGAITASVGLTKPVSAASSSTAAFFTGVMYTVAVL ILCAGIMAWARWTRSSDSNALVLQAREEALVAEQEKQRILAANMERDRISTSIQAEVTAT LNSVINQAVDGIRMLDAAETQGKEPTADEISTAFKAIGEQGRAALKRMRELLGVLRETGF SDDAHAGSASELQLRPAAPLEEQLQRVSR >gi|148337405|gb|DS264454.1| GENE 774 864047 - 864157 63 36 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|212716973|ref|ZP_03325101.1| ## NR: gi|212716973|ref|ZP_03325101.1| hypothetical protein BIFCAT_01919 [Bifidobacterium catenulatum DSM 16992] hypothetical protein BIFCAT_01919 [Bifidobacterium catenulatum DSM 16992] # 1 36 10 45 45 64 88.0 3e-09 MASIPPTCGDNLTSQKRLYPAAISFPRMMASQHIWR >gi|148337405|gb|DS264454.1| GENE 775 864214 - 865557 1275 447 aa, chain + ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 35 440 39 424 427 183 33.0 6e-46 MTLLSEYYVPGLHIEDRSIKVPLDWTGHEPGHGFDGESISLFYRVVTAPEYVHDDLPLLV FLQGGPGGSGPRPLGPSSDGWIEEAIKHFRVVLPDQRGTGRSSRVDTHVIEGMDGGGKAG AAFLKRFLADSIVRDFEHLRRTEFGGARWATLGQSYGGFLTLTYLSLFPQGVIASFTTGG IPHVPADATDVYRHTFPRMAAKTKQFYERYPIDVERAAAVADILQSRKVALPNGDPLTVE RFQCLGSDFGMKPSFERVHWILDQAFLDGDGSASTSAELSDEFLSSVMDATSARPLYWPL QEFIYANGELETPICWAAQRVRGEHPEFAGDIRPLNFTGEAMFPWMFEQERALRPFKPAM DVLMEDTHFGTIYDADQLARNEVPLQAVVYFDDMYVDSGLQLDTLSRVGRSHYWTTNEFE HDGVHGSVVFKRLFNEALNRGDLEELF >gi|148337405|gb|DS264454.1| GENE 776 865618 - 866418 942 266 aa, chain + ## HITS:1 COG:TP0797 KEGG:ns NR:ns ## COG: TP0797 COG0345 # Protein_GI_number: 15639784 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Treponema pallidum # 6 263 3 258 263 183 41.0 3e-46 MSNPTIGFIGYGNMAQAIAEGLVAAGAIDGTDIVACAAHYDKLEKTTAKVGATPLRTAAE VADAADVVIIAIKPYQIESVIKPIAGALANESTFVVSIAAGWDLARYRELFGADFGAMHI QCTIPNTPMAVGKGVLVTETDNTLTDAQNETFEKLFSSISLIERVDSAHMGIGMCIAGCA PAFTDMYIEALGDAGVKYGLQRATAYRLAAKMVEGVGALYLANETHPGAMKDAVCSPGGT TIKGVASLEESAFRGAVIKAVDAIEA >gi|148337405|gb|DS264454.1| GENE 777 866436 - 867530 1545 364 aa, chain + ## HITS:1 COG:Cgl1003 KEGG:ns NR:ns ## COG: Cgl1003 COG0012 # Protein_GI_number: 19552253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Corynebacterium glutamicum # 1 362 1 361 361 418 64.0 1e-117 MSLTIGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDNRLPVLAKLVHT EKIVPATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDDDIVHVNGKVD PADDIDTINTELILADLQTIENALPKLEKDLRGKKIEPAYMDAVKQAKEILEAGETIDKA AREGRFDKDSVYDLHLMSAKPFIYVFNVDDSELQNQDLKTKLAASVAPAPAIFLNAQFEA DLTELDEDDAREMLADAGLEESGLDQLARVGYDTLGLSTFLTAGEKEVRAWQIHKGYTAP QAAGVIHTDFEKGFIKADIVSYDDFVAAEGSMTKIKEEGKLRQEGRDYVMQDGDIVEFKF NVSK >gi|148337405|gb|DS264454.1| GENE 778 867770 - 869047 1078 425 aa, chain + ## HITS:1 COG:SPy2122 KEGG:ns NR:ns ## COG: SPy2122 COG0582 # Protein_GI_number: 15675872 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pyogenes M1 GAS # 13 392 4 361 381 80 23.0 7e-15 MTAKTTRKTGGRSRRTKGAGGIIHRADGRWEFRREIGRDPATGKRRFIAASGRTKADARE RFGAKVAEMERTGLLPGAKSPYLKDYAERWLEEYRLNVKPTTYRTRAGRIHACMEVIGCI RLTDLTPDHIRKCMRVLSKRLAPSTLKDHFVSLKMMLDQAELEELIPVDPCRRVKPPRVE PTETRILSPDQPKQLIEAVPNRGAKRRGPALTVDVDESWMLLFELAFAAGMREGERYALM PYELEQRDGVPGINVQQQIQQYGKPEDAVIPAWLKAEHLYGILWLTTPKTHAAHRFVPIS TSLWQRLWARIKRLGIGPRDLIFTNSRGNPVRSSTERYNWNKALKAASLPPVTIHSARHW TASMTARANMPDDARTAIMGHTSITMTNHYTHRDTASLAALLDQAIPDLHDDTDIIEVEI IEETA >gi|148337405|gb|DS264454.1| GENE 779 869111 - 869524 645 137 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0901 NR:ns ## KEGG: BBPR_0901 # Name: not_defined # Def: phage protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 137 1 136 136 200 73.0 1e-50 MKLVYPIILYPMEEHEGGYTVEVPDLPGCVTEGHDLADALDMARDAASGWILDEMEDGRA VPHASNIADVKPDEPDGIVSLISLDMDAYAEKYGSKAVRKNVTIPAWLDTFGERNNINYS QVLREGLESRYRALQDA >gi|148337405|gb|DS264454.1| GENE 780 869521 - 869718 175 65 aa, chain - ## HITS:1 COG:MA2135 KEGG:ns NR:ns ## COG: MA2135 COG1724 # Protein_GI_number: 20090978 # Func_class: N Cell motility # Function: Predicted periplasmic or secreted lipoprotein # Organism: Methanosarcina acetivorans str.C2A # 1 57 1 58 64 64 56.0 4e-11 MRFKEIEKRLLADGWVLKSQRGSHRQYVHPVKPGKVTLPNHTGDLDPRTVKSIWKQAGIN ERRTK >gi|148337405|gb|DS264454.1| GENE 781 869853 - 870773 542 306 aa, chain + ## HITS:1 COG:no KEGG:BAD_1370 NR:ns ## KEGG: BAD_1370 # Name: not_defined # Def: ImpB/MucB/SamB family protein # Organism: B.adolescentis # Pathway: not_defined # 3 304 51 353 357 322 52.0 1e-86 MPKTIQRTVAFYWLRLRSREAVSYRPVEDVDWESRLADLDSMKWQEKAIDGIRYDAILGK EYPILSVSEQFDPTFMQYIDRENERVTDYMDNYLAGERGDLAKSSAFAFFPEYALIGRIS GSAGKSSEPLKKALDHYWSPGGEFEWDVQPVVTVDSIERFERELKELSSFTAGFTTRRYL DSTAQEGGKTGEFYREMADAIGTDLDVEIKVSIPKDGFFPSAGRKLKGTVSDLVAFAVKQ NKQMQVSGTDLAGKLLELNLVSHPVVEQEDIIIGENEPRQFTNLIDHLVKVCTEKQTYLY EISRGA >gi|148337405|gb|DS264454.1| GENE 782 870775 - 871302 412 175 aa, chain + ## HITS:1 COG:no KEGG:BAD_1371 NR:ns ## KEGG: BAD_1371 # Name: not_defined # Def: Na+/H+-dicarboxylate symporter # Organism: B.adolescentis # Pathway: not_defined # 42 170 7 135 137 126 51.0 4e-28 MSRKSTLGDALAAHPSVDMLAPAIPIIIWAISGRPVPDDNVSQNLFVALSTLSGLVMAAV TFICSMSYQSESRYMQIARDRYHDELSRNWVSIIAWTAITAVLPLASLCLWPSRPGLSTA ISIYALVMMIAKLGRSIHWMKYTLFMQKASMTIGEPFTDKDMQKAFQRHEANGIR >gi|148337405|gb|DS264454.1| GENE 783 871363 - 871569 264 68 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0115 NR:ns ## KEGG: BBIF_0115 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 51 1 49 65 75 80.0 8e-13 MTERFLSLKEVGERLGVKNPAAKGYNLPEPDALIGATRGWLPETIDRWNAARPGRGVGGG RPRKHPEE >gi|148337405|gb|DS264454.1| GENE 784 871566 - 871730 68 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487099|ref|ZP_02028506.1| ## NR: gi|154487099|ref|ZP_02028506.1| hypothetical protein BIFADO_00939 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00939 [Bifidobacterium adolescentis L2-32] # 1 54 1 54 54 65 100.0 2e-09 MIISRAPKSFRWFYGVSLACGAMCLILAIGGRTIAAGVFGAAAGVFGYLAGGER >gi|148337405|gb|DS264454.1| GENE 785 871854 - 873002 1032 382 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_2367 NR:ns ## KEGG: EUBREC_2367 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 219 1 220 325 125 35.0 3e-27 MKQRATLDEQINTLVSHGVTFDLMDEEKARRFLSNNSYFFKIKSYENNYRKTIDESGGYV YDNLDFGHLVELSLVDFALSRLVWSMCSSIEHSIKVRFNQLIMKDQNPDIADICVRRCFS GNLPTMHDNPYTDDMKTGLQGDFALWNLWELLGFNDQLTLFNTYWRYRHNENHPYQHLLF IVRKMRNAVSHGNCLLTDMSRPSPHKKDTGRSDIEITKAAMRLCDKPRKTGSKTRSFQQS LDRLVAHNYACVLLCHLEFVDSPRALIHSCHEVQSFLDRMNQRRALYFGVAGGAREPRNI LIDSTLSAIETLSRSYIKKARIKADELDAKDPYGSRKQVSVEKIRERIDRRKRKITDLQT EIDNLEQRARRLAANEAEGEQS >gi|148337405|gb|DS264454.1| GENE 786 872999 - 873769 766 256 aa, chain + ## HITS:1 COG:FN0281 KEGG:ns NR:ns ## COG: FN0281 COG2176 # Protein_GI_number: 19703626 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Fusobacterium nucleatum # 68 256 414 596 1454 126 35.0 4e-29 MRKRTLYWILAALFAASAIYAPFDDNRDSGLPLTIVTIIALVALAVGFAMAARKVDPEAR FKKKPKSVTKMKSKPVKAKDLMVDNYTSIDLETTGFSPSDDRIVEIGAIRVRNGRPVKRY SQLINPQRPLPEEITRLNGLTDADLRNQPTVDQVLPDFIRFIGNDTLIGHNINEFDAAFL LANTTRLGMRHIGNKTIDTLPLDRALYPEEPKHRLVDIIRRFGIAQTESHRAADDALQTA QCYETMKAYMKANGIK >gi|148337405|gb|DS264454.1| GENE 787 873857 - 874324 671 155 aa, chain - ## HITS:1 COG:no KEGG:Blon_1147 NR:ns ## KEGG: Blon_1147 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 155 75 229 229 197 89.0 1e-49 MKKAIALLVAAMLLTGLSACGGSTTADAPAKSDGTSKTETNKEEPKPQPADLTGTWKQTN SNDPSSYMEATISGDTIEVNWIGTDTKSLYWKGTYQAPAAAGDWKWTSQGDTETMASALL ASQDATKDFTYSEADGVSWETTALGTTITVKTVKQ >gi|148337405|gb|DS264454.1| GENE 788 874474 - 874800 297 108 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0724 NR:ns ## KEGG: BLIF_0724 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 108 150 257 257 222 99.0 4e-57 MFYTPNVGIRGVSSYEHSFDFLFQRSANHPTRFCQAPNRFDKDAVKDIMFGWDDTKKDPK RRDSRLIVIGDDRQTPLQRGALTAFRNYGVTVIPYSKLEERAPVELAA >gi|148337405|gb|DS264454.1| GENE 789 875067 - 876509 663 480 aa, chain - ## HITS:1 COG:FN1603_3 KEGG:ns NR:ns ## COG: FN1603_3 COG5324 # Protein_GI_number: 19704924 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 164 425 6 270 273 84 29.0 5e-16 MAKLIILRGLPASGKSTWARSWCEDPANTWPHCVISLDDIRLMIAGSAQVRNRLQSEHGK RFNDMVVAMGRHMIADALDAGWDVVADAQHANPRYAAELALLAQRHGALWETRDFDVPLD ELLRRNAARDTADRVPEDYIRSSWKHFHTAMFRPLEPGDPNGNLLERMRADPYVRVIPVR GETDVYACNFTAEAFREHRWTDRTINARGLFVGGNGQVVQRGFEKFFAVDETEETSFAQV VNHAQEHPESLPVRVERKENGFLGLVGAAGTPGLFRFWSKSGQTDYSALIERLFPSDSAV RAELWRMLHEWNVTAAFEVIDRESDRHIVGYESSGLRLLHLIRNAESFSIDAAHEETFTL AGGFVRPETVAIRHSPEEVAQAIGEAKASPREGVVLYFADGWMVKVKSDRYKLVKAMRPL MQRVLLRGRSFNKSGDIADLARRIIDYAHEHHIDLAYERQAFGERDIDMTKVNDIVDHVR >gi|148337405|gb|DS264454.1| GENE 790 876645 - 877415 658 256 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0729 NR:ns ## KEGG: BLIF_0729 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 255 20 274 292 509 99.0 1e-143 MKYFTTDTHFGHPLVSVLRGFTTFDPGHTQYDALLSSQGRKAAEDWVKGVVLDDSRLNFR KAADTDAHDEAIVANINRIVGEDDELWILGDIGYRTSVRHLKSCLRQLRCRHLHAVIGNH DDWWLDDAPARDLFESIEPNSTAELTGLGIGRPQATETVNLSHFPYREDLAYGWPDDAVR FRDQALPFDGHRLLYGHTHQLSPEGARHEALNVGLDAWNLQPVSETQIADWFHAHATDST HVSPLDMPDSPGPAPH >gi|148337405|gb|DS264454.1| GENE 791 877594 - 877764 167 56 aa, chain - ## HITS:1 COG:no KEGG:BBMN68_669 NR:ns ## KEGG: BBMN68_669 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 56 1 56 56 92 98.0 4e-18 MIQRIAFSSNGVNEHAKRQQTNLPAMLECAFKQGLRTAQFQPITGNKRSLLAAIQI >gi|148337405|gb|DS264454.1| GENE 792 878002 - 879171 544 389 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_668 NR:ns ## KEGG: BBMN68_668 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 389 1 389 389 509 99.0 1e-143 MGNMFDNLGKGLNDFTKQAGKIAGNIGDTAGKITKDVAKGAGKIANDAGKLAGDAGKMTA AVAGSVAQSAAVASGEVSKAADSMAKGTVSIAKNVKDSADKVDLFNSKLRAKAVEDYNNA VERYENVADDLAKSTQALYDLRKIAIVHVKYVEQHINQLANTPKEFAVELHKINTEVTTF ENKEDEIKEAEKQAKAAEGGSGAGATLSALGIAVATMGPTAAMGVATTFGVASTGTAISA LSGAAANSAALAWLGGGALAAGGGGMSAGTAFLGLAGPVGWTIAGVAGAAAIGSGIYANH KNKETADKLLLERQNVEVLIRKFNVKNAEVAALTEATQTQIDGVQRANAAVTGADYSQFS HEEKMQAGLLVNMTLTLAQMINKELELDD >gi|148337405|gb|DS264454.1| GENE 793 879164 - 880672 567 502 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_667 NR:ns ## KEGG: BBMN68_667 # Name: not_defined # Def: protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 502 1 502 502 952 99.0 0 MTDKNTADKHAIDNNVAQGIAAYIDYLNQLRVSTLMDTLRQILNNETGQLKDLAERQANA LRNLDLANQNVMNIVNSGRGGENGMHGFIAEFAQTGIANARRAFEGLEKSTITLNNNGPA DLLINGKPVQVKFYANLMNELKTSAEYRSMDMMFSKDHMDVFRAVMHGDKEVFLNGQPLT SNQVQKIKQIIEEESNIRGLSWDKWMQSSVLKYDQVQREAIDRTFTEETDNIKRQTSEQK SEISNKANTDKAAAYHKAQPNLGEANKAAGVGAAIQGGLNFGIFVYQKHEEGKEIWQFTA EDWKEGGVKTAEGAFKGGFSGYAIYGLTNVCHLSAPSAGAIASGTFGLIDAVMKFRSGEI DDDGFLSLVTINALDATGAAVGAAIGQTLIPVPVVGALIGSIVASNVLGLGKNILSARER AIIAEYQRKADLFVANLDVQYAQILETLLDKYRKLGELQTYAFNLDLNIQLRFAASVDLA RFIGVSETEILHNEAEIDDFFL >gi|148337405|gb|DS264454.1| GENE 794 880762 - 881127 558 121 aa, chain - ## HITS:1 COG:Cgl0825 KEGG:ns NR:ns ## COG: Cgl0825 COG3304 # Protein_GI_number: 19552075 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 1 119 1 121 136 85 42.0 2e-17 MRVLGNILWIILGGLAIAIGWALVGLILCISIIGIPFGIQAFKMAGLTLTPFGKTVQYGG GVGSALANILWVVMVGWWMALGYLGAGVLNCITIIGISFGIQSFKMAKLALWPFGAQIYS L >gi|148337405|gb|DS264454.1| GENE 795 881315 - 881500 59 61 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0731 NR:ns ## KEGG: BLIF_0731 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 19 61 6 48 48 78 93.0 1e-13 MGFTVDLNDDRLLDACRTKTHQGDAMNLYRYAMFIARACRGSFVGNVLFANPQMALFSML V >gi|148337405|gb|DS264454.1| GENE 796 881731 - 883782 1930 683 aa, chain + ## HITS:1 COG:BS_ycnB KEGG:ns NR:ns ## COG: BS_ycnB COG0477 # Protein_GI_number: 16077452 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 24 467 12 455 472 327 39.0 4e-89 MTSQKTAEFGSAASSVKPIDSHARFIVVGVIVVGSFIALLNQTVMSPALPALMRDFNITT GTVQWVTSVYMLVSGIMVPISGYLIDKFSTRKLFAGALATFMVGTLLCAVAPNFVLLLVG RILQSAGSGVLLPLVAVVPMLVYPPDKRGTAMGMAGIVMAAGPAIGPVVGGLVIDGFGWR PMFIGIAVVALVILVGGTMMLKNVSELKNPKLNVLSVILSTIAFGGLLYGFSSASTMGWA SPVVITSIVVGLVAFVAFVYKQVKLDEPLLRVDTLATRNFRNSAILVTLINAAVAATNVT LPIFIQNVLGQSATVTGMVMLPAAAVGIILSPVAGAAFDKFGPRGVGIGGLALMTISLGL LGTINTRTSVLFVAVFCALQASGQAIANMPINTWGVNALPNDMIAHGNAIANTGRQIAAA IATSLLVTAETSVTASHMSQGVKSATASGIAFSYLLCAAISLVALIICIFTVTSRAKEKA ARNAKAYEAQASAEVAVETTEGQPAEHHYAGAYVAPASSLFKQTQEQSIGGIMDDHPYSC LDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMKSIATYESRTVSTGTGSTMV VFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKLPVVDGDGRL VGVIRRKSVMEHAFDALFPKDDR >gi|148337405|gb|DS264454.1| GENE 797 883810 - 884046 234 78 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0698 NR:ns ## KEGG: BLLJ_0698 # Name: not_defined # Def: transport protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 63 373 435 496 89 95.0 4e-17 MRVVAFGITLVGVSVVGLGVVHKLLAYLLIDVVNGLASAICMGPMRTIIQTETDEKMAGR VFGQARRNTSVDAARNAA >gi|148337405|gb|DS264454.1| GENE 798 884063 - 884488 248 141 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0734 NR:ns ## KEGG: BLIF_0734 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 141 426 566 566 229 78.0 3e-59 MFSQTQTLNMAFPNQTIYNAGQAGQGTAPATVDFVALSPNEYNVTEAQGTATFPISGISK VRNNDGGTTFNGEVRAVTDGFKPSDGQQIKVSLVLRDKQGTIIYGEMAFVDWPDNGQSMP FSILVYDLPDYTSYESYAQIW >gi|148337405|gb|DS264454.1| GENE 799 885039 - 885290 122 83 aa, chain + ## HITS:1 COG:no KEGG:BAD_0610 NR:ns ## KEGG: BAD_0610 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 83 44 126 142 125 83.0 5e-28 MTLRDCPRAMRVVVDGIDLDDRHRFRLCEIGLAPGAGLRVMQRSAFGGRVVAFGNERVAV DGGTARAVRVRFARDEHAQDDVA >gi|148337405|gb|DS264454.1| GENE 800 885419 - 887422 1860 667 aa, chain + ## HITS:1 COG:AF2394 KEGG:ns NR:ns ## COG: AF2394 COG0370 # Protein_GI_number: 11499970 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+ transport system protein B # Organism: Archaeoglobus fulgidus # 20 659 2 556 563 330 34.0 5e-90 MGGDSGNMGNVENVKRVVFVGNPNVGKSSMFNALLGARTRTMNAPGTTVSITCGQYRYKS SKTTKNPQNWQFVDTPGTYSLSPMSPDEQVAVDALTGASGMPVPDLAVVVLDATALSRSL YLLSMVVELGLPTVVALTMNDLAVRNGCGVDAERLSHLLDGMPVVAIDGRTGNGGKALAD AIAASFEGTPVPHGLTALPTATADADMKTADGLSVWAESRADARLDWTAGILRGLDMHAV DHATLSDRIDRVLLHPVIGVLVFLAVLFVVFQATTTLASPMQDWIDVTFRGWCADGLDLL LGLFGPSVSGGWLRSLLVDGLLDGVVTVLTFIPVMGIMFLLLSILEDSGYMARAAFVMDR AMRALGLDGRAFLPIIVGFGCNLPALAATRTLSDSRQRVLTGMLVPFAACSARLSVFLVL AHAFFPKYAGLVVFLMYVASVMVILLVGVLLRHTMFRGLEPEPLMLALPAYQCPRALQLA RSVLLRLWGFIRGASVIIISMITALWLLQGIPVTANAGGFAHVDDVHDSAYGVLADAVAP VFAPAGFDDWHASAALITGFVAKEVVVGSMSQSYHADEPDDAASQQAGEGTLGQKLRASF DQSSHGHGKAAAIAFLLFTLAYTPCLATVAEMRRQFGTKVAARSVLLSLAVAYVIAIIAF QTLRLIW >gi|148337405|gb|DS264454.1| GENE 801 887428 - 887760 56 110 aa, chain + ## HITS:1 COG:no KEGG:BAD_0612 NR:ns ## KEGG: BAD_0612 # Name: not_defined # Def: peptidase # Organism: B.adolescentis # Pathway: not_defined # 1 110 1 110 110 211 99.0 1e-53 MERSGASAHGWRRTPRTADTYGDGRNDIVARIAGDIAAGLTVRQIADKRHLPVDFVDMAV ERADKRGLLAVMDMRHACGETICQPDPASLVCAGCPFRIFPSSSPYNRQG >gi|148337405|gb|DS264454.1| GENE 802 887808 - 888632 1033 274 aa, chain + ## HITS:1 COG:no KEGG:BAD_0613 NR:ns ## KEGG: BAD_0613 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 274 12 285 297 363 98.0 6e-99 MDYQYQTTEQPSSPRKAWPIVLAVVVALIVACGAGVCVYRNKQQEALATCRQSLAEFSSA RKAVLDTSENGSELQKLIRGALGVNDIIDAFADAATSAENTVDTEGCKAEATITQLNLVA KTLDSATDSLNASLKSIQEKNAETALQDPKADSDGAAAGQSSNNPSGQSNGASSNSTSSN GTSDTKSLDESKKELQQSIDEADKLVDKLSKDDSLTLTGRKLLSALSKAADSGQKLVESS NIKDSKYYKAAKVTLDEAIDMADNWVNSQAAKAQ >gi|148337405|gb|DS264454.1| GENE 803 888735 - 889682 1114 315 aa, chain + ## HITS:1 COG:PAB2381 KEGG:ns NR:ns ## COG: PAB2381 COG0697 # Protein_GI_number: 14521649 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Pyrococcus abyssi # 19 297 7 270 280 94 29.0 4e-19 MADAGQESSEGISVSKPVARVMMLVNAAVWGSGYTMLKHVQENMPTQWMMFFRMASAVLL MAIVFFPRLRRIRLRRYIVPGLILALTYWLGFIFQLKGLETTSPGRNSFFTDTYCVMVPF VVWAFTRKRPSWQHLVAAFVCAFGIGLVSLSGGGGAELMHMSFGDAMTIIGAFFFALNLV LVGFIGKDFDAIALMLAEFVWCALLFGAGAVLTEGGPSMAWARWDIVLCIAYLVIGSTVI AQVFQTIAIQNLPTSEASVILSTECIFAMLVSVIFTGETLTVPSLCGFALIFGAILLSEI QLPSAKRQRGTTEGD >gi|148337405|gb|DS264454.1| GENE 804 889679 - 890743 1345 354 aa, chain - ## HITS:1 COG:lin2251 KEGG:ns NR:ns ## COG: lin2251 COG2855 # Protein_GI_number: 16801315 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 23 353 17 331 335 160 36.0 3e-39 MIDFCKKWWTRIATKEMAFIGIVTLAASLVASWLKQFPGFSLFGALIIALLIGMVAQFPI RKWYSNRSAEHKAGVKDAAGLISNKLLRLGIILLGFKLNLTVLFTQGIKCLPIAAVVVTL TIVVCYNIARKLGVDPQLAILVAGGTGICGAAAVMGLSGSIKVPPEKEDEKANNEVMAVA IIAIMGTIFALLEIALGPLTGLSKTQLGITAGASLHEIAHAVAAGDAFGAVGIATIMKLS RVLMLVFAAIIIAVWWDKNHSEMPADGKRKVSFPWFMLGFIGASIIGTFVPFIGAIAPNL VDFAYIVLGMAMAALGINVNFSAIAKKGQKAFLASFLTSVLLMCFAAGIAALFF >gi|148337405|gb|DS264454.1| GENE 805 890921 - 891835 1210 304 aa, chain + ## HITS:1 COG:MA0367 KEGG:ns NR:ns ## COG: MA0367 COG2768 # Protein_GI_number: 20089264 # Func_class: R General function prediction only # Function: Uncharacterized Fe-S center protein # Organism: Methanosarcina acetivorans str.C2A # 17 304 61 354 355 306 53.0 3e-83 MQFEASRLEGLEHRTDAQSAPEVFFTPIITPESLVAAYHALGRKPEGKTAIKVHSGESEK SNNLNPSLVKDLVQEIGGTLVECATAYDGNRETPEKSLATFKKHGYADLAPIQIMDMSGE IEIPVAKHRHIAYDIVGKHIDDYDSIFVLSHFKGHPMGGFGGALKNVSIGIASSNGKRWI HSAGVTKDKWVETPQDAFLESMAEADEAVISHMHGKMMYLNVMNRLSVDCDCLASPTEPD MHDIGVLSSLDPVALDQACVDLIHTAPDGASVTERIASLHGEHILEYAEELGIGSRAYRL TVLD >gi|148337405|gb|DS264454.1| GENE 806 891847 - 892467 420 206 aa, chain + ## HITS:1 COG:no KEGG:BDP_0831 NR:ns ## KEGG: BDP_0831 # Name: not_defined # Def: phosphoribulokinase (uridine kinase family protein) # Organism: B.dentium # Pathway: not_defined # 14 196 10 192 192 309 80.0 4e-83 MVTKPAKPTEASIAIARIETLLAERDCVFVAIDGPCTSGKTTFAAMLNRRFGGNVLHMDD FFLRPEQRTPERFAEPGGNVDRERFETEVLAPLAAGQAAQYRPWDCHTGDFAVAYAVEPA QLTIVEGSYSMHPALRRYYDCMICLAVDPAEQLRRLERRNPRMLQRFVDEWIPLENRYFE ATNIQAVADLLVDTALPDGGSVVEPV >gi|148337405|gb|DS264454.1| GENE 807 892513 - 893103 1014 196 aa, chain + ## HITS:1 COG:no KEGG:BDP_0832 NR:ns ## KEGG: BDP_0832 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 4 193 2 191 191 213 86.0 5e-54 MSDSATMPAAALRRTDLPKLSLGTKTAATLLAIVAAVVLPQLFHVIGAVSGQGTMLGVAF LPMHLPIIFVGLIAGPAVGAIAGAAAPLVSFLLSGMPMLAMLPLMMVELCAYGLVAGLLR GIKLPSLAKVVIAQLAGRVVLTAATAIAVFAFGSSKAIAATWTSDLAAGLPGLALQWALI PLAAYWTESLIAKRNH >gi|148337405|gb|DS264454.1| GENE 808 893224 - 894063 1022 279 aa, chain + ## HITS:1 COG:Cgl2018 KEGG:ns NR:ns ## COG: Cgl2018 COG0730 # Protein_GI_number: 19553268 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 2 271 3 264 269 93 28.0 4e-19 MIAGVSITTLLLVLVAGIGAGFVGYAVGASSLISYPALLAFGIPPVLSNTTNTVGVCGTG IGGLLSARKELKGQGRRVAVYACIGLVGGIIGGLLLLELPAKVFEFAVPPLILFSALIIA LNPRKKAAARDAVAQALPQSHQGERAARIASKTADGTLRNDPWWLWAGVSFVGVYSGYFG AAAGTLALAILDLGKIGPFHQINALKTVVGFGANISAAIMFICRGSVYWPFAIAMCLGCI IGSSIAPPVTRHIPENIMRAAAVLTGIVLAVKLGCSTYF >gi|148337405|gb|DS264454.1| GENE 809 894436 - 895362 884 308 aa, chain - ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 1 308 1 309 309 388 61.0 1e-108 MQETITSESLFCDYYAQWVRTYKEGAIRDVTMGKYRLTQSWLGKLIPELRLTDMDRTAYQ QLINGYAQHHERQTTMDFHHQIKGAILDAVDEGLIPRDPTRKVIIKGKQPRIKKMKYLNQ FELHAMLADLDLGAEASWDWLILLIAKTGLRFSEALGLTPDDFDFAHQTLSVNKTWDYKN GGGFVPTKNESSVRKVQLDWQLIMQMSGLLKDLPHDKPIFVHGKVYNSTANDVLAKHCRN VDVPVISVHGLRHTHASLLLFAGVSIASVSRRLGHASMTTTQETYLHVIRELENKDVDIV MRALSTLI >gi|148337405|gb|DS264454.1| GENE 810 896004 - 898565 2529 853 aa, chain + ## HITS:1 COG:lin0522 KEGG:ns NR:ns ## COG: lin0522 COG0286 # Protein_GI_number: 16799597 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Listeria innocua # 8 501 9 506 529 367 40.0 1e-101 MNKQQLASKIWESANKMRSKIEANEYKDYILGFIFYKFLSENELMRLKDTDFTEDDLLLL TEDNPDIVEGVQDECGYFISYDNLFSTWVKKGNDFEISNVRDALSAFSRNINPARKRVFD GIFDTLQTGLSKLGTDARSQSKAARDLIYLIKDIPMDSRQDYDVLGFIYEYLISNFAANA GKKAGEFYTPSEVSQLMSEIVAWHLQGREQIKIYDPTSGSGSLLIHIGQSVARRNGNPNS IMYYAQELKENTYNLTRMNLVMRGILPDNIVARNGDTLEDDWPWFDTLENKEETYNPLFV DAVVSNPPYSQNWDPTDKEIDPRFSYGIAPKSKADYAFLLHDLYHLRADGIMTIVLPHGV LFRGGEEGQIRKNLIENRHIQAIIGLPANIFFGTGIPTIVMVLRKKRDDDKVLIVDASKH FIKDGKNNKLQASDIKRIVDVVSNNRTVPKFSRLVSIDEIRANDYNLNIPRYVDSSENAE TWDVYASMFGGVPKSEVEQLGEYWNAWPSLKAELFRDNGACYACDHDDVATVVRNNADVQ TFVASYAQAISGLPSDLRFRLVEHPEQVDALGQETAIGEELDAMVADTALIDPYDAYQKL DDAWGGISIDLEVLGSEGFDAVRAVDPNMVIKKKGGKDVEVQDGWIGRVLPFDLVQRELL HDDLAAIEADERRVQDIDSEIETILEGFDEDDKQNSDAINQDGDAFVAAELKKAVKAIGK NPVSDFERGLVQAQKLFDESKKLKSGIKTKRNALEEKTCDAIKALSDDEARRLLEAKWIT PLQKQLEALPNAVIDEFIGKVNALKNKYATTYADVCGQIDEAEKELAGMLGDLTGNARDM AGLEELKALLGGE >gi|148337405|gb|DS264454.1| GENE 811 898567 - 899784 257 405 aa, chain + ## HITS:1 COG:SA0392 KEGG:ns NR:ns ## COG: SA0392 COG0732 # Protein_GI_number: 15926110 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Staphylococcus aureus N315 # 6 405 5 403 403 170 32.0 5e-42 MAEQHEKALVPQIRFTGFTDPWEQRKLGELASKRIEKNTNGIKETFTNSAEHGVVSQLDY FDHDITNDANIGNYSVVHPDDFIYNPRISAVAPCGPINRNKLDRNGVMSPLYTVFSVDDT IDKLYLEHYFKTSRWHQFMFLEGNSGARSDRFSISDSIFFEMPIQCPVLEEQELIASFFG RLDSLITLHQRKYDKLCVLKKSMLDKMFPKGGSLYPEIRFAGFTDPWEQRKLGELFEEHS EKDRDDLPALTIIQGGGTVHRDESNRNLQFDRNSLSNYKVVDTGDFIVHLRSFEGGLEKA TCCGLVSPAYHIFRGKNVDSDFYYLYFRSKRFIDADLKPHVYGIRDGRSIDIEGMKTIFI PWTNLAEQRRIGAFFDRLDSLITLHQRKLELLRNIKKSMLDKMFV >gi|148337405|gb|DS264454.1| GENE 812 899793 - 900440 300 215 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|23335919|ref|ZP_00121150.1| COG0081: Ribosomal protein L1 [Bifidobacterium longum DJO10A] # 2 197 4 198 226 120 37 2e-25 MAIITLFHGSPYESVTPEYGLGNDKHDYGRGFYLTANVELAKEWAVCRPDESNGWVHQYE LDTNGLRILDFQEHSVLTWLAELMKHRDAADSKRYRVLATKFIAEYGIDTSGYDIIKGWR ANASYFYIAKEFVRDNVDVDILEELLSLGGLGIQYCVKTAKAYRQLREVPDGLLSVSYSE FNDKYNQRDVEARQNMRDLIDSDANTVTNVFSTLL >gi|148337405|gb|DS264454.1| GENE 813 900452 - 900868 609 138 aa, chain + ## HITS:1 COG:no KEGG:EUBREC_0883 NR:ns ## KEGG: EUBREC_0883 # Name: not_defined # Def: hypothetical protein # Organism: E.rectale # Pathway: not_defined # 1 137 12 148 149 204 75.0 8e-52 MRAYPEVYRDDVVETQGKLFDYVAQSFPNKSTEDFITVYMASKTRKSIDEAKAYVNTMDA KELWKYFTETEHYQLKDGRALEGFMPDWIGEFYAYYQWFYGIPSAEVIAKVPLDFLKKAY FGLHDLDLELAVRKVGEE >gi|148337405|gb|DS264454.1| GENE 814 900865 - 901359 292 164 aa, chain + ## HITS:1 COG:PA4580 KEGG:ns NR:ns ## COG: PA4580 COG3236 # Protein_GI_number: 15599776 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Pseudomonas aeruginosa # 17 158 41 182 184 122 45.0 4e-28 MTDIICFHNPDEENGYLSNWYPSRFVVVDVEFSSMEQYMMYRKACCFNDAETAARILRTS DVAEIKRLGRLVAGYDDHVWNGVRQIEVYEGLLAKFSQNAELGAQLVATGNAILAECAVK DRIWGIGLSMHDPARLDPAQWRGQNLLGYALMLTRKKLNRVDER >gi|148337405|gb|DS264454.1| GENE 815 901421 - 901726 157 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487138|ref|ZP_02028545.1| ## NR: gi|154487138|ref|ZP_02028545.1| hypothetical protein BIFADO_00978 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00978 [Bifidobacterium adolescentis L2-32] # 1 101 25 125 125 131 99.0 1e-29 MRSIPKKIEMTCLLLQSFRAEAQFIVTSLIGISSLIETVFQTTKLLIREILLSIFVRLKE DSKRLHAAVWLVPLIISSVAKTSILISIISISDQSVLSMRI >gi|148337405|gb|DS264454.1| GENE 816 901627 - 901941 58 104 aa, chain + ## HITS:1 COG:no KEGG:Acfer_1175 NR:ns ## KEGG: Acfer_1175 # Name: not_defined # Def: restriction modification system DNA specificity domain protein # Organism: A.fermentans # Pathway: not_defined # 1 84 284 367 384 135 72.0 6e-31 MVSPAYHIFRGKNVDSDFYYLYFRSKRFIDADLKPHVYGIRDGRSIDIEGMKTIFIPWTN LAEQRRIGAFFDRLDSLITLHQRKYCGVVSWMLGVALVRLSSEK >gi|148337405|gb|DS264454.1| GENE 817 901965 - 905147 3525 1060 aa, chain + ## HITS:1 COG:L0308 KEGG:ns NR:ns ## COG: L0308 COG0610 # Protein_GI_number: 15672632 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Lactococcus lactis # 6 832 3 792 995 355 31.0 2e-97 MFYDKESDFEDDLVAVLKRHGWTDGVLEYPTEQDLIDNWANILFDNNKGIDRLNGQRLTK GEMAQILEQIETLRTPLALNSFINGKTVSIKRDNPADTAHFGKEISLKIYDRQEIAAGQS RYQIARQPIYPAKNKMLNDRRGDVCLLINGMPVIHIELKKSGIPISQATNQIAKYAHEGV FTGLFRLVQVFVAMNPDDAVYFANPGEGDFNSNYFFHWADFNNEPIAANKHVGQDEWKRF TSDLLSIPMAHQLIGFYTVADSADGCLKVLRSYQYQAVNAISDRVRTCKWDEPVPSGTPG RPGGYVWHTTGSGKTMTSFKAAQLIAGSKDADKVVFLMDRVELGTQSLLEYRSFADDADD VQGTENTDVLKSKLASIDPKDTLIVTSIQKMSNIKAGEGHITEEEVKKLAGKRIVFIIDE CHRSTFGEMLQDIRHSFPNALYFGFTGTPIHEENRKKGATTSMVFGDCLHRYSIADGIRD GNVLGFDPYMVLTYRDKDVRQAVALEKAKAATVEEAQADPAKAEVFYHYMDPKQMPMGPM ETQAGEHVKGIEDYLTAAQYAQGTPHEDKVVEDILDQFPLLSRGNKFHAMLATSSIPEAI SYYHLFKERAPQMHVTALFDPNVDNSDGAILKEDALKEIIGDYNELFDKDFIIPTWPKMK KDITARLSHKRPYLTVDQHREERLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYENIIQAF SRTNRLFGPDKPFGTIRYYRKPHTMKGYIEAAVKLYSGDKPLDLFVQKLPENVRLMDARF EEIASVFSAGGVEDFMRLPESVEACRKFAKLFVELNDFLESAKVQGFTWGRQEYSVTHDD GSVEVVRPKFDERTYLILVQRYKEMFSSGEGSGSGPEAPYELDGHITEIDTGLIDTDYMN ANFTKWLKALGGGDPALLTSAEEELHKSFASLSQEEQRYAELFMHDVERGEIELEEGKTL RDYITYYANSAKNSQVEQITKAFDVDGALLNEMMRLDLTETTLNEFGRFDRLKASVNRSL AKAFFDKPDSPVSQFTANLLATKLLKSFILEGGFDLDDRK >gi|148337405|gb|DS264454.1| GENE 818 905159 - 905905 949 248 aa, chain + ## HITS:1 COG:BH3679 KEGG:ns NR:ns ## COG: BH3679 COG4753 # Protein_GI_number: 15616241 # Func_class: T Signal transduction mechanisms # Function: Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain # Organism: Bacillus halodurans # 135 237 151 253 257 90 41.0 2e-18 MAVVDEAKLRYLDFLSREDRVRHHRYVEEMKQYDMMRSGDINAIAESTRLWDSGLYGYLS DDPLKNAKYRFVTTITLATRFAIEGGMDEEDAYNASDLYIQNLENCKTPDDVRRLHTDMM TFFTWAMADMQKAETHSKAVNECLDYIHYHLHEKITVPILAEHVHLNPTYLSELFKRETG TAISQYITDKRMEAAENMLKYSEYSFDEIAQILAYRSQSHFSKVFKKHSGMTPGEYRTKY AQNGIWPE >gi|148337405|gb|DS264454.1| GENE 819 906129 - 906941 835 270 aa, chain + ## HITS:1 COG:no KEGG:BAD_0620 NR:ns ## KEGG: BAD_0620 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 270 1 270 270 522 96.0 1e-147 MGMPLDLYVIRHGESEANVIISAGEQGDNSLYTQDNVTVPDRSWRLTATGRKQADCIGRW LVAQQPLFDRYLVSPYVRTRETAATMALPKAKWEETRVLRERSWGEINTITKDDFKTNYA RNWMFKNTDPLYWRPPAGESIADVAENRVHNLLTSLNRKSDAESVVMVSHGDLMLALMLT LEDLSDEEFMHRAAADEWKITNCTCFHYSRRDPSTGRTHKRFRWEQTARPVLDETDGRWV VKVDDWREFKRPVLSNGDLVDVVHAVDRHL >gi|148337405|gb|DS264454.1| GENE 820 907089 - 908390 659 433 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 26 410 5 413 447 258 36 4e-67 MSNPIAGLFTWKLHGDGKTLKPGEVVEPDERLTWPRTAEIGAQHVIAMFGATFLVPILTG FDPSTTLFFTAMSTALFLLINKNMLPSYLGSSFGFIAPIAAVASAHKGLAVASFGIMVTG ILLALIGVLVHYAGAKWIDIIMPPVVNGAIVAIIGFNLAPSVWNNFKVAPDTAIVTLVAV LLVAVLFKGLLGRLNILIGVIIGYAYACFRGQVDFSAIGKAAWVGLPEFRLPQVDFTILP MFIPVVLVLVAENVGHVKSVSQMTGRDYDDQIGTALFADGLGTTIAGFGGGSGTTTYGEN IGVMAATKVYSTAAYWCAAAFALILSLCPKFGAIINTIPAGVLGGVTTLLYGMIGMVGIR IWVENKVNFDKPVNVMVAAITMIIAVGQFEFAFNGISFNGIAIGTVVILVAYHGLKAIGK ATGTIAKDDPDIL >gi|148337405|gb|DS264454.1| GENE 821 908548 - 909258 1033 236 aa, chain + ## HITS:1 COG:BH1506 KEGG:ns NR:ns ## COG: BH1506 COG0300 # Protein_GI_number: 15614069 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Bacillus halodurans # 7 209 3 204 259 71 28.0 2e-12 MSTAAGKKIAIVTGSALGLGYELARQLIGKGWFVAGIDFNTARQEELSRTFGADEYRAFV GDISDEAFVKDSVAAIKEIGHIDLLINNAGQPSFKKPVDYEAADVDKCLKGLKGMILWSV ETLKADGEQDLKIANVMSTAATRGNANESVYCATKWGEKGYTTSLKAAYKGTSVKVVGVY PGGIDTDFYHDSHDYVSLDKQHSFMSAAELAEVVLFNLVNDANLTVSDILIERNYR >gi|148337405|gb|DS264454.1| GENE 822 909356 - 911542 2490 728 aa, chain + ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 29 485 3 437 448 289 41.0 1e-77 MPDTAVIENEDALAADFDEAGEEEERPQTFAELGVPGPLVRVLAADGKKTAFPIQADTLP DSLAGRDILGRGRTGSGKTLAFSIPLVARLGEVDADEYENMSQFRHEVEQVRKGHAEERR ADDFLPHPRGLVLAPTRELANQINDVLMPLAQMYGMTTTTVYGGVRYARQIRDLRAGADI VVACPGRLEDLLEQHALTLEKVEVAVIDEADEMADMGFLPPVKRLLGQVSFDAQIMLFSA TLDHGVDEVVNTFLTDPKIHSVDSATAAVDEMTHHVFETTQGDRHELVRTLASGKGRRIL FTRTKFQTQKLAKDLTKNGIPAAELHGNLSQNQRDRNLAAFESGDVNVMVATDVAARGID VSGVELVVQVEPPEDPKSFLHRSGRTARAGHSGDVVTIVLPNQRRRTRRMLHEAGLKVKP IEVTHDSPEVLELVGESAEPRFGWTLEQSQPAGNPRRRHGKGGDGSAENGGRSGRNRSGG RNKDRGKDKGGKPFKSERKDRANRKGREERAEVAEREQRFEPKQNRAERRAAKFEGRDNR EYEAREHRWEHPEIQEEKREKHEEKRNNKRREKYARLHEQQRAEAGEQRGTDNRKRRSDE RSDQRGQSDRKPGKKQYAKKQGAPTKKQRKAEARAERRYEDDRQYRRNRDERDDRRQGGK RIHRKEIRVIHDERGEDAKRYDRRMEAKYGDSGRRGGHGERHDKHAGERQGKPFRKHAKI RKAPFRSR >gi|148337405|gb|DS264454.1| GENE 823 911627 - 912415 1053 262 aa, chain - ## HITS:1 COG:slr1647 KEGG:ns NR:ns ## COG: slr1647 COG0390 # Protein_GI_number: 16331056 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Synechocystis # 38 256 38 256 259 131 35.0 2e-30 MNGNYYAIDIWGLIAALVMVAIAAGISETMRMGVGRTLLWSACRALLQLCAMGFIMEYVI RSNNPWLVLLLVAFMLIAAVQITLSRAKGVPKGLAGPVFLSLVVTMLIMISLVTELIIRP QPWYAPQLVVPLTGMLLGNTVSALAVGLSRFFESMKERRDEVDTLLALGATTWEAARPSI VSSIRLGLLPTTASLASAGIVTVPGMMAGQIIAGGNPIDAAKYQFMILATIAALTLLADS IIMLMVYKRCFTALDQYQPVNS >gi|148337405|gb|DS264454.1| GENE 824 912412 - 913143 189 243 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 223 16 224 245 77 27 1e-12 MVDGERRTIFSGLSFAIEPGEIVDLVGPSGAGKSSLLTAFARLNPRASGDLRLDGRSADD FTPQQWRAQVAYLPQKPVLLGETVAQAIRLPFTLAIRQSARTKQGPRRISPTDALPDGRI RETLDNMGCADIDLNRPPHDLSGGQAARVSLARTLLTRPKVLLADEVDAGLDDDNAEKVA RILAKAAADGMAIVRIRHRPPDGRATRVMRLADGTLTQSGNAEADGTATGSTSTGNTVEG SVA >gi|148337405|gb|DS264454.1| GENE 825 913325 - 914725 1388 466 aa, chain + ## HITS:1 COG:Cgl0942 KEGG:ns NR:ns ## COG: Cgl0942 COG0627 # Protein_GI_number: 19552192 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 91 414 76 391 426 154 32.0 3e-37 MLGMGNMRQWLMNISLVGGWFPAAAFAVIAVLSVTLLVSAAVSKRDGRILATVLPIGVAA VSGMVGYVVAWLLSDVFVVFGVGLGSRVMSWVAAGFAIAGFAIVHIVLSRGMMRVAAAIL TVFAILAAAIGIDQSYGEYATIGSLFGEDSYSQADLTGLAKRKDLITVAQWRKQAANGTI RNIPANGTVNKIDIPATKSQFEARKALVYLPPAALADSKRKPALPVVLMLSGQPGSPGRV FQAGGIQTMMDGYAKTHDGLAPIVIAADQLGADSHNTLCVDSKVYGNALTYLTQDVVDWV KTNLPAAQDAKDWAIAGFSQGATCSLQIGVNHPDLFGTMIPTDSEIKPTNGSRQEMIDRF FDGDTTAYENQVPVNAIRNHAPTHQMLIIGAGEKDTTSIRNVKTIAPVAAKAGMRVAAVE SSGNAHDWHAVQDVLRYGLAVFGHDTGLDGANPNLSDYPNLKRITI >gi|148337405|gb|DS264454.1| GENE 826 914776 - 917364 2859 862 aa, chain + ## HITS:1 COG:Cgl0941 KEGG:ns NR:ns ## COG: Cgl0941 COG2898 # Protein_GI_number: 19552191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 104 861 57 804 804 279 28.0 2e-74 MTQTQTAPAKPAEASPAKPLFGFRALLADLAGWIRRHLLTVCLVLFVILINVGTQIVCAL IRQPFPPSLAKVSFEALARGRWYTAPISMLYVPNLGRLLIDVPLMLVAFGLAESVIGKIK TAWVSVITTLGGVALGMGLCSLSDGRSPQWHAISHDGAILGPLILVAGTLMCASAFTTML WRRRIRVIGYAVVLIMFLYRGEVSDYCLLATSVIGHVLGYLMASRTHGDEYRHGAIYEMR RLIGIVAGVQAIGSLVAVSSRQSFGLLSMFGLLTGSTGFDTGRVVDCLSGASHTDCFTQY RMMRFTMPGNWLVSITPTLMLLLIAWGLYRGRHLAATLSIVFNACTIALSTVFYVAIPLS YVDGSDAGAYMDAISALQRHGAFHAMLATMALPLLCIVIIILFRSCFTIRTKSETVLRGV AITFAAFVLLGLLYVGYGLSMPSGFNETPLLVDLIADYVQRLLPIGLLSGVEPAFVPVGL LSEIVYQCVGPMFWLVALCCTWDGLRDRSMINDAYRHRVDEIIGLGGESMSFMATWKGND YWFSATGRSAIAYRVSYGIALTVTGPFGDPDEYEDDLHAFAGFCTQRSLTPVFYSVHAEQ RDALVSAGWNALDVGTEMVIDPAAWQTRGKKWQDVRTAINKAKRDGITDVLATFKESPFS VQTQIREISTQWAGEKALPEMGFTLGGVDELVDPRVKLLYAVDTDGKVLGVTSWLPTYEN GKVVGWTLDFMRHRTDSVNGIMEFLIARMAERLRDEGEVRFMSLSAAPLAGMSGEGHEQG ESAVLDHVLQMVADIMEPAYGFHSLFRFKLKFHPDEAKVYICYPDPAKLPQISLAVAQAY VPSLTPAEAMRFVRTIVPTKTN >gi|148337405|gb|DS264454.1| GENE 827 917485 - 918933 2084 482 aa, chain + ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 5 482 8 484 484 593 62.0 1e-169 MSAEANVGVVGLAAMGGSLARNLAHHGNKVAVFNRTYARTEKLMNEHGGEGEFYPAKTLE EFVDSLVKPRTAIIMVKAGEPTDAMINALADLMEPGDIIVDAGNAYFPDTIRREKEISAR GLHFVGCGVSGGEEGALLGPSMMPGGSEESWKTLKPIFESIAAKAEGEPCVTHIGLNGAG HFVKMVHNGIEYSDMQLIAESYDLMRRGLGMTPAEIGDVFEEWNKTELDSYLIEITAEVL HQVDKKTGKPLVDLIVDHAGMKGTGTWTVQTALSLAVPVTGIAEAVFARGLSSEADLREE AQKQGFAGPDGKLNLNDDEKKAFIEDIRQALYASKIVAYAQGFNEITTAAKEYGWDIDLA AVARIWRGGCIIRAKFLNRISEAFESGEANVSLLFAPYFKNAIENAEKSWRNVVAQAAIN GLPTPAFASSLSYFDGLRSKRLPAALIQGQRDYFGAHTYQRVDQPGAFHTLWAEPGREEI EA >gi|148337405|gb|DS264454.1| GENE 828 919456 - 920247 912 263 aa, chain - ## HITS:1 COG:MT1492 KEGG:ns NR:ns ## COG: MT1492 COG0363 # Protein_GI_number: 15840904 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Mycobacterium tuberculosis CDC1551 # 8 263 7 245 247 129 38.0 5e-30 MTERKTVVYPNPQVLAEAVAARTLLTIIDLLAEPNRKRVDIAVTGGTDGNRVFAAMNASP LNDAVDWSRVHVWWGDERFVAADDDDRNAKQAREAWYGALVESGRMPAANIHAMPADTRG AEEIAAASPEQTDAVLAEAAAEYQRELIEQLGENPALDIAMFGMGPDAHFASLFPDHGEA EIDDPHVLVAGVRDSPKPPPLRLTLTVPMIARSKHTWVFTSEERKAGAVKAAFAQRNNPH APSSYADGEELLWLIDEGAASKL >gi|148337405|gb|DS264454.1| GENE 829 920283 - 921230 1069 315 aa, chain - ## HITS:1 COG:MT1493 KEGG:ns NR:ns ## COG: MT1493 COG3429 # Protein_GI_number: 15840905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 300 1 290 303 215 43.0 7e-56 MIITLQDTETREISAKIDELHEERGEAALGRVLTLLISTNEAELEHDLEVANNASREHPC RVIAVAPSSRKISPEEEHPTFLDAEIRFGSDAGAGEIIVLRPRGGLVRHADTLVIPLLVP DAPVVAWWPNEAPANLSKDLLGSMASSRITDAMHSSNPRRTMDDLRRNRSAKDVDMSWTR LTVWRAMIASMLDQPPHLPVSNVRVTGQKDYLPLDLLAAWLRLRLNVPVMIEEDPNATAV TGVYLTRGDGVLSLERPSTDDGFAVISVPGQSPQTISVPARTLEECLSEELGRLYPDEIY SEVVSQGLDLVKPRQ >gi|148337405|gb|DS264454.1| GENE 830 921227 - 922798 1882 523 aa, chain - ## HITS:1 COG:MT1494 KEGG:ns NR:ns ## COG: MT1494 COG0364 # Protein_GI_number: 15840906 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 12 523 4 514 514 738 68.0 0 MKGMSETVSTASNAAGAWTNPLRDPRDLRLPRIAGPCSIVIFGVTGDLSRKKLLPAIYDL ANRGLLPPSFGLTGFARRDWTEDHFKDFVKENVQAHCRTPFKESTWKQLAAGIRFVQGTF DDPKAFERLSDTVAELDRDRGTRGNHAFYMSVPPRAFPQVSRQLADCGLAKSDKGAWRRV IIEKPFGHDLASAKELDRVVSEVFDPSSVFRIDHYLGKETVQNMLALRFANAMYEPIWNN NYVDHVQITMAEDIGVAGRAGYYDGIGAARDIIQNHLLQLMALTAMEEPVSFSAADLTAE KTKVLSAVRLPKDLAAHTARGQYAAGWQGSHEVVGYLDEKGIDPESTTETYAAIRLDVDT RRWAGVPFYLRTGKRLGKRVTEIAVVFKRAPHLPFESTATKELGKNAVVIRVQPDEGVTM RFGAKVPGGTSMEVRDVSMDFGYGRSFTESSPEAYERLILDVLLGDPPLFPTTEEVNLSW KILDPIEEFWSTLGQPQPYRSGTWGPEEAVEMLARDGHRWRMP >gi|148337405|gb|DS264454.1| GENE 831 922879 - 924327 1933 482 aa, chain + ## HITS:1 COG:FN0667 KEGG:ns NR:ns ## COG: FN0667 COG0534 # Protein_GI_number: 19704002 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 27 450 4 421 426 214 33.0 4e-55 MAVPSFGAATTMPSQANDEPAAAGGGKNMVHNKQGIDMLHGRIWTKVLRFALPVAATGIL EQLFNASGIMIVGNFSQSDGTAAVAAVGSNAPVTGLILNLFIGIALGANVVIANAIGRGS REAVRNAVHTSIVTALIGGVIVAIIGELLAGPLLGMLNVTADVFPLALAYLRIYLIGMPV ILLYNFETAIFRSIGDTQAPLAVLAISGVLNVTMGLIFVVLFHWGVSGVATATVIANVVS SMILLYRLVHTDAAIHVDLREFGIDWFTLRQILRIGLPAGVQSAVFAVANIIIQAAINSL GTVVMAASSAAFNIEIIAYYVLNSFSQACATFTGQNYGAKRIGRCKRVLGICILEDFIAT AATIAVVLFFGHSLLALFDATPEVISVGYTRLVMVFSAYTFSMLYEVMSGYLRGFGISLV PALLTVIGVVGVRITWIAFVFPAHRTFEAIMIVYPISLAATAVLIGIALLCYRPSKRFAV KP >gi|148337405|gb|DS264454.1| GENE 832 924317 - 925111 600 264 aa, chain - ## HITS:1 COG:all3753 KEGG:ns NR:ns ## COG: all3753 COG0300 # Protein_GI_number: 17231245 # Func_class: R General function prediction only # Function: Short-chain dehydrogenases of various substrate specificities # Organism: Nostoc sp. PCC 7120 # 4 258 9 263 263 186 38.0 3e-47 MGYALITGASGGIGRELAALFAADGHDLAITARSQERLDMVKTKLEQRFGVHVVTFAIDL SEANAPKKLHDFTTSQGIAVDHLVNNAGFADWTDFLDADWNRQNEMMQLNMHALAELTYR YGRDMRANGHGRILNISSVASMMAGPYMAMYFASKAFVRSLSEAVAHELRGTGVTVTCVC PGPTTTGFQKAANMSGRNFFTMTKPATARQLATYAYRRMMRGSTLAYHGPLTKAGALAER VLPRALTRRIAAFMNGGKPHTLKV >gi|148337405|gb|DS264454.1| GENE 833 925289 - 925912 554 207 aa, chain + ## HITS:1 COG:L118481 KEGG:ns NR:ns ## COG: L118481 COG0350 # Protein_GI_number: 15672513 # Func_class: L Replication, recombination and repair # Function: Methylated DNA-protein cysteine methyltransferase # Organism: Lactococcus lactis # 27 183 4 163 169 141 47.0 7e-34 MCRKTKSAIHRRDRCFVERWITAVKKKSHYDSPLGGITLIADETALLGLWFDWQPGYADD DSAVLGDSPTIGAAKRWLEEYFAGCIPRTEVPLRLEGTPFRKEAWALLRKVPYGETVSYG GLARRLELKRADGRRVSARAIGGAVHHNPIALIVPCHRVVGADGSLTGYAGGIETKIRLL QLEGVLKQTERTDVDCESIDRIWRSTR >gi|148337405|gb|DS264454.1| GENE 834 925881 - 926396 439 171 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 2 171 10 177 179 129 40.0 3e-30 MVVVFFSRAGENYEVGEVTVGNTAKLAQEVARRTDSPMIEITRTEPYPERYAATSEMVQE EQRVNARPLLTLSGDVDALDSSDTVFLGYPIWCGDMPMPMYAFLESRDWSGKTIYPFCTH GGSGLGRTPERITAITKTTVKPGLAVMGTDAQNNASKAAEAVSGWIAKSGL >gi|148337405|gb|DS264454.1| GENE 835 926464 - 927669 1178 401 aa, chain - ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 3 384 2 376 384 326 40.0 6e-89 MTYDFDTPIDRSGTYSLKWEEAGDALPMWVADMDFQTAPVIREALRRRVEHGVFGYSIVP PEWNQAYVDWWGRRHGLAIDPDSLVFCTGVVPAISSMVRKLTTPNENVVIMTPVYNIFFN SILNNGCRVLESPLAYDGEGHYEIDWADFETKLADPQTTLMILCNPHNPIDRIWDCETLE RIGELCWKHHVTVVSDEIHCDLTDPGFDYVPFASVGEHCAMNSVTCMAPTKTFNIAGLNS AAVMIPNPVLRHKVWRALNTDEVAEPNAFAMDATLAAFNEGEPWLNELRAYLAGNKATAR AMFDKYNASVPADRRIIMVEGHATYLLWVDCSAITHDTDALCDYLKREHKVMFSEGSEYG GNGHDFVRINVACPRARMIEGLARFIDGLLAYRAQSFPKMD >gi|148337405|gb|DS264454.1| GENE 836 927690 - 928580 832 296 aa, chain - ## HITS:1 COG:no KEGG:BAD_0636 NR:ns ## KEGG: BAD_0636 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 296 6 301 301 583 99.0 1e-165 MNNTPDTFTSAAEQDMSETRQAFLTGERAEFFAHDRRYVDTIFDDGESPLKHAHDIELRS SSFKWKYPLWYCSDIDAKDCTWFEMARAGVWYTDHITVEDSTIEAPKNFRRCHDVTLRNV DFVNAEETLWACSGVTLDNVSAHGDYLAMNCADVKADNLRLVGNYPFDGARNVEISNSRL ISKDCFWNCENVTVRDSFISGEYLAWNSRNVTFEHCTIESLQGLCYVDHLVLRDCRLVNT TLAFEYSSVDADVRGTIDSVFNPSSGTIRADHINEMTLDPAKIDPTATTIVTADAA >gi|148337405|gb|DS264454.1| GENE 837 928718 - 929233 797 171 aa, chain - ## HITS:1 COG:BS_yrkL KEGG:ns NR:ns ## COG: BS_yrkL COG2249 # Protein_GI_number: 16079700 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus subtilis # 1 158 1 159 174 155 49.0 3e-38 MKTLVLVFHPHLEKSQVNRKLMDAANETGDVTVVDEYAAYPDFKINVEHEQELIETHDRI VLQFPFYWYSSPALLKQWEDDVIKAGWAYGGGRALEGKEFMLAVSTGSPADSYTREGSHV RTMEELLSPFETTFRHTHATYLKPFLIQGVATSTDEQIDAAVAKYPAALIG >gi|148337405|gb|DS264454.1| GENE 838 929502 - 930248 937 248 aa, chain + ## HITS:1 COG:BS_azlC KEGG:ns NR:ns ## COG: BS_azlC COG1296 # Protein_GI_number: 16079724 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permease (azaleucine resistance) # Organism: Bacillus subtilis # 4 230 28 252 254 219 48.0 4e-57 MGKAFRTALPRTSPVCISFFLLALSYGVLMGTRGFSFLWPMCMSAFIFTGSMEFVTVNLL VSAFNPFVTFMLAVMLGTRHLFYGISMLGRFKNMGAKKPYLIFSLCDETFAIDNGTIIAA DVDRGWFYFFVGLLNQSSWVAGATLGGLLGERITFNTSGLDFIMTAMFAVIFVDQWLTTK RKSHMAALTGIAVPAICLGVFGADNFMIPSLVAMLVMFILLRPYLDDLKIDKTDGENETN NADKETNA >gi|148337405|gb|DS264454.1| GENE 839 930245 - 930583 369 112 aa, chain + ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 2 111 1 110 110 114 66.0 4e-26 MMIMTTWQGVITIIMAMLGTMLTRFLPFLLFPESKEPPRFITYLGTVLPYAMTGLLVVYS LKGVRLTSGSHGIPELLAIIAIALLHIWKRNMLLSIAGGTAVYMLLVQLVFS >gi|148337405|gb|DS264454.1| GENE 840 930614 - 931867 1051 417 aa, chain - ## HITS:1 COG:L100350 KEGG:ns NR:ns ## COG: L100350 COG1472 # Protein_GI_number: 15672482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Lactococcus lactis # 63 415 46 401 403 218 36.0 1e-56 MPACHNGGMKKAHGFFTRLVAACCVAMLPVTLAACSGDASPSDAATAAFSTRRPTVTHDS LDKAQVPSVRDDSPHAKAVRAVESMSVEERVGQLVMAPLFAGSDPSSLYDLIANRHVGSV LIIGNWTSGIAGVAAATSTLQSYAPGDNQLLMSTDQEGGLVQHLKGAGFDTMPSATQQGA MDVSQLRQSASAWGTQLKAAGINVDLAPVVGTVTVDRSSNAPIGALYRDFGLDPAGNADH AKAFIQGMSDSGVGSAIKHYPGLGSVTGNTDFTANGILDTTTTLDGPEISAFNSTLEASP SMVMMSLATYQAIDPNNPAVFSSTLVTGYLRGKIGFQGVVTSDSLSATALSGVQPSDLGV RLVEAGGDLACIGASSYVQPVLDGLNAKAAGDATFARKVQQSAIRVMTLKYEMGLAR >gi|148337405|gb|DS264454.1| GENE 841 931997 - 935233 4580 1078 aa, chain + ## HITS:1 COG:Cgl0762 KEGG:ns NR:ns ## COG: Cgl0762 COG1615 # Protein_GI_number: 19552012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 74 985 3 897 967 589 38.0 1e-168 MFGPMFDPEGGSNRAGRQNPRKPSNDDPIILNVETDGGDGPQPSSNVPPKRPSGPRITSK PNRPRKPSNGSKIFIGVVLALAIVIGLFFALAQFVTDVMWYSQLGFQSVIWTQLGTRVGL WLAYAVLIAAVGFISATLAIWARPDAADGSTIRVNGDTIEIGKSVSSKSARRIAVVISLI VGLVFGSQFNANWSEILLMFNSQSFGTKDPQFGIDNGFYVFVLPGLKLIMSAVSLLLLAG IIFSIVTHVLMGGIRITMPVNGHGLFRITKRARRQIGIWLMLNMFAWAANQVLGVFSHLT EEGSRITGATYTTVNATIPVTFIMAAITAILGVILGLWIMKSHTLEGSAPIAARASEALK AWKVPTVAIASAIVVSLVLTVAWPVLLQRFRVNPNAQEMESTYIQRNIDATRAAYGLDKV KAEQYKATTEGEEGALADSAESTAQIRLLDPQIISPTFKQLQQSKQYYTFADTVAVDKYD VDGVSQDTVIAARELDLDGLDNRNWVNDHTVYTHGYGVVAAYGNKVTADGQPKFFEAGIP TQGKLTDSEKYEPRIYFSPNATEYSIVGAPEGTKSWEFDYPTGSEGATNTFKGDGGPKIG NIFSRLLYAIRFGSDQILFSNRVNSNSQILYDRSPKERVAKVAPYLTLDGRVYPAVVDGR VKWIVDGYTTSDAYPYSQMTDLGEATKDSTTESSDTVSSLNSKNANYIRNSVKATVDAYD GSVDLYVWDQSDPVIKAWEKIFPGQYHQLSEISGDLMSHMRYPESLFKVQRELLAKYHVS SANQFFSGEDFWQTPVDPTESQQAQQRDILQPPYYLTLQTGGSSEPVFSLTSSYIPAGSS TREILTGFLSVDSDAGHEKGKIGSSYGTIRLQELPKDSNVPGPGQAQNNFNASADVSKEL NLLESGSTNVQRGNLLTLPLGGGLVYVQPVYVKSSGSTSFPLLKKVLVAFGDQVGFADTL DEALDQVFGGDSGASAGDAENVGDTTDDKQDAKNDDSADGKTNTDGKQDTPSNTDGKTGG NNGDSSGTMSADLKKALDDAAQAMKDSDAAMKKGDWSAYGDAQKQLQEALNKAIELEQ >gi|148337405|gb|DS264454.1| GENE 842 935298 - 935852 652 184 aa, chain + ## HITS:1 COG:sll1647 KEGG:ns NR:ns ## COG: sll1647 COG1247 # Protein_GI_number: 16329646 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Synechocystis # 12 177 4 161 172 82 30.0 4e-16 MSFAAGYAGRMADYSFRIATQDDIQAITDIYNAAVIRGGSSADTTPRTYAQRKAWVESHH DPYAVFVTTVPATDAATEGGERIIGFSALSVFYDRAGYDGVTDLAYYIAPEWQGRGAGTF TLAKLLDECRNRHMRKACGIIFADNRGSIALMKHFGFTQFGLMPQAATDSTGTMRDMSYW HLDL >gi|148337405|gb|DS264454.1| GENE 843 935926 - 936525 857 199 aa, chain + ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 6 198 2 184 187 158 44.0 7e-39 MASDFWLIAGLGNPGSKYEGTRHNMGFMTADVLAERWSVNFSDHKGLAMLGKGVMNLSGR NVKFFLAKPLTYMNESGNAVASISAYYQIEPDHIVVIHDDMDLDFGRIKVKAGGSAGGHN GIKSIDRSLGTSKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADA AETIIFDGLAKAQERFNGR >gi|148337405|gb|DS264454.1| GENE 844 936515 - 940081 3887 1188 aa, chain + ## HITS:1 COG:MT1048 KEGG:ns NR:ns ## COG: MT1048 COG1197 # Protein_GI_number: 15840448 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 20 1184 13 1206 1234 1057 49.0 0 MAAEPTSPAQPPQLPTAGSLAGILDVLETDDDFRALIAGEIEEPESDIDPSITVGVPDGL RPALAAGAAGKQPVVLVVASSREAEEAVESIRSWYDGDPNDVAQLEAWETLPHERLSPRA DTVASRMAVFRRLKHPEEGSTLFGPIRILVMPVRSLIQPVVAGLGDVEPLVFSQGEELPL DEASRKLVENAYTRVDLVMDRGEFAVRGGIIDVFPPTLPHPVRIEFFGDEIDTIREFHAS DQRTYGKDISTVWATPCRELQLTDQIRQRAKSLIGSIPNAEDMLESIANAIPVEGMESLL PALVDDMEPVQGMLPKHALVMLSDPEKLRRAADDLAKTANEFLAASWHVAASGHGAGAPI TFDQANFYDFEETISALVFSKHDVWKLTSFGVDATREGHIQLDATKPGEYRGDENKAASG IEGLLDAGYAVTITAAAQGTLTRLKRAINETGIANFDCVRSRAIDGFVDDAAKIALLTER DLTGRTSAAGQAKTPKRRRKAIDLMELKTGNYVVHEQHGIGRFVEMRQRTIGKGENQTTR EYLVIEYAPSKRGAPADKLFIPTDQLDQVSKYIGAETPKLNKLGGSDWAATKAKARKHVH EIAEDLVKLYSARQRTKGYAFSKDTPWQKELEDAFPYQETADQLTTIDEVKSDMEKPIPM DRLICGDVGFGKTEIAVRAAFKAVQDSKQVAVLVPTTLLVQQHFETFTERFEGFPVNVAA MSRFQTTKEINETIKGLEDGSVDVVIGTHKLLNPKIKFKDLGLVIIDEEQRFGVEHKETL KALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGAYEDAQVTAAI RRELLRGGQVFYVHNRVQDISSVAAKIHELVPESHVGIAHGKMGEKQLDGVIRDFWHRDI DVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYAYFLYDPTKPM TQQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGFDLYVRMVSEA VEQYKEPERKESVAVTIDLPIEASIPVDYIDSDKLRLEAYQKLASARTEDDLDELRDELT DRYGKPPVDFEALFDVARLRFKARKLGISEIIAQGRNVRVSKFEPRESVQMRMARIYKGI QYRPLTKTYLVPAPFAGSLGSKPMSSDEVVGWTSQLLDDLDWKPTPRQ >gi|148337405|gb|DS264454.1| GENE 845 940205 - 941503 1945 432 aa, chain + ## HITS:1 COG:Cgl0949 KEGG:ns NR:ns ## COG: Cgl0949 COG0148 # Protein_GI_number: 19552199 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Corynebacterium glutamicum # 1 423 1 420 425 488 61.0 1e-137 MAVIESVYARQILDSRGNPTVEVVLDTDDGAQGLGLVPSGASTGEAEAWERRDGDKSVYQ GKGVLNAVKAVNEEIAPKVIGMDASDQRALDETMIELDGTPNKGRLGANAILGVSLAALY ASAESADQPLYRYIGGTNGHILPVPNMNIMNGGAHADFATDIQEYMISPYGFNTYSEALQ AGVEVYHTLKNVLKKQGLNTGLGDEGGFAPKMKSNKDSLNYIMDAISAAGYEPGKQIGIS LDVASSEFYNKETGKYHFEGDDREAGYMLDFYENLINEYPIVSIEDPFQEEGWDDWAAIT AKLGDRLQFVGDDLLVTNPARLAKGIKLGAANSLLVKLNQIGTVTETLDAIELATKNGFT SMVSHRSGETPDTTISDLAVAKNTGQIKTGAPARGERIAKYNRLLEIEEELGSTAQYAGY SAFKACKKYIAE >gi|148337405|gb|DS264454.1| GENE 846 941586 - 942134 470 182 aa, chain + ## HITS:1 COG:no KEGG:BAD_0646 NR:ns ## KEGG: BAD_0646 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 182 1 182 182 284 100.0 1e-75 MSSKARKKPSQRGGAGPVAFFVALFIVALGTIQLASTFHTYALNLAELNGLKKQEAALVA QKRELENDIARWDDKAYVTAQARDRLGFVFPGEQAIRVEHPEAVTGKSEPKKGTTYDESP KTALPWYKELAYSFKQADRSDPVKADSTKQSQHAGEEDKQDSQQQTGQSQQDGQQPSEDG QE >gi|148337405|gb|DS264454.1| GENE 847 942136 - 942708 603 190 aa, chain + ## HITS:1 COG:MT1053 KEGG:ns NR:ns ## COG: MT1053 COG1507 # Protein_GI_number: 15840453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 25 176 6 150 163 126 49.0 2e-29 MDMTIIEQAKGLADKVLAQPATEHDIAVVERQLGRYPRGMVAVGARCVCGRPLAVVTRPL LPGGVPFPTTCYLTGPEAVKAISHIEAEGKMKEYNDMLAENEDLRAGYERAHELYLAFRH EIALALEDSEEHIEGTSAGGMPVRVKCLHALLAQTLVMGEGANPIGDMALSAIKHEFDPA VCRCAVENEE >gi|148337405|gb|DS264454.1| GENE 848 942721 - 943716 1126 331 aa, chain + ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 1 321 1 315 319 204 42.0 2e-52 MKSVTVAGIDCGTNSIRLKVSRVSEDGVEDIVPRILRVIRLGQDVDKTHRFADEALARAY EAAREFAGVLAEHPVDGIRFVATSATRDAENREEFEDNIEKILGVRPEVIPGTEEADLSF LGATSIVHREVEAPYLVVDLGGGSTELVLGGDGVTHPSTQVQAAFSMNIGSVRMTERHLK NDPPTEGQIAEAVADIDAHIDEAFKTVPAGKTHTIIGVSGTVTTMTALAMGLTEYDHTAV DGARCTLEDAYAVDDRFLHMPREERLTYKTIHPGRVDVVGGGALVWNRVLAKVSEAAYED HGQRIDSFMASEHGLLDGIVLDYGKRLLAAR >gi|148337405|gb|DS264454.1| GENE 849 943974 - 944474 441 166 aa, chain - ## HITS:1 COG:no KEGG:Blon_1573 NR:ns ## KEGG: Blon_1573 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 2 163 3 160 164 66 32.0 4e-10 MEEMGYRNFNAIRQLGQMGKFSKMRADGTLSTSNSALLLLTYMASVTYDWDTERNCPTPD AKAKGYPCRYYKRGAETFAYDYGKLGISPEQAMSEDAQEYIEKRKGAANQEFKRSITTLK DWGVIKQLEHAKNGKPAGYLLLLGDDEENRAVEQWARQCLGLPMVW >gi|148337405|gb|DS264454.1| GENE 850 944788 - 945573 743 261 aa, chain + ## HITS:1 COG:FN0281 KEGG:ns NR:ns ## COG: FN0281 COG2176 # Protein_GI_number: 19703626 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Fusobacterium nucleatum # 82 255 409 583 1454 122 38.0 9e-28 MKKLIYLVLSVLCGISGIYGIYDTITTPKYDLATSIMTVLLLAFLAWFFWHLSLKPEPRH KHQATNAPESSPEATSDAPTVETAPITHVNANSGVEDDYVAVDIETTGLGRDARIIELGA VRIRHGRKVASYSQLVNPQIPIPAKVTQITGITDRNVKGKPTIDKALPKFYAFCGRDTWI GHNIRRFDIPVIAREAQRVGAGMPDVSFYDTMELSQALLPQLDHHRVVDLIRYFGIAKTE RHRAADDAAQTAQIFEHLKQI >gi|148337405|gb|DS264454.1| GENE 851 945616 - 946203 424 195 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487176|ref|ZP_02028583.1| ## NR: gi|154487176|ref|ZP_02028583.1| hypothetical protein BIFADO_01017 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01017 [Bifidobacterium adolescentis L2-32] # 1 195 1 195 195 336 100.0 6e-91 MRKKIIAITAATLLLATACGCGSQQEPDSTPAKTPDVSAQQEKPQQQAAEKTAQSFVDEF NANSSTPITDVEKFTPSDSNGPYYRAEYRTGAFSTADALHGRLGQSSVDVLVYGAVLGYG KNDMLRVYVDGPHDEISSVFPIMAKILDPSISDQDIQSQMAKEYPSNDLIYAATHKLIER AYVDGDHAFLDAKIS >gi|148337405|gb|DS264454.1| GENE 852 946196 - 946666 299 156 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1146 NR:ns ## KEGG: BBIF_1146 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 31 142 7 119 134 87 42.0 2e-16 MERLGRITTSLPDLPIDRRMTYGAMRRAIVGLPVTVSSAILPDGLWGCYDAATEVILIDR RLTYTAKRCTLAHELLHWRHGDTGCANNSSKVEIRTRRQTARLLIDPAELALAERMYDDD LWSIAEELNVTTQVLTDYRAMLNTSPNRIKERFFNA >gi|148337405|gb|DS264454.1| GENE 853 946629 - 946991 531 120 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0070 NR:ns ## KEGG: BBIF_0070 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 77 1 78 110 72 46.0 4e-12 MGRKAQEVTHFAKQVMDECVRLQKQSGMTIKEFAKACGFGEVYWYTRANYSLPLNLSDLE RISEVTGVSIGDIVMDSKRHAVEAAERKAQAGGYGLAAYDAAGKQEAINGEAGPDYDEPA >gi|148337405|gb|DS264454.1| GENE 854 947110 - 947238 202 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487179|ref|ZP_02028586.1| ## NR: gi|154487179|ref|ZP_02028586.1| hypothetical protein BIFADO_01020 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01020 [Bifidobacterium adolescentis L2-32] # 1 42 1 42 42 78 100.0 2e-13 MLSTKKTKTPDHYPCGHMRGPGWHDWRACLTKQGIEEDEWPV >gi|148337405|gb|DS264454.1| GENE 855 947226 - 947474 246 82 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0881 NR:ns ## KEGG: BBPR_0881 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 5 81 4 80 81 68 50.0 6e-11 MAGLTETASRNLAGELARHRKTREDLAKAWGCAPKTVDTRLRGQTPLTTDEIEKAAHLLG LEASTLTMVLIQPIDAASQFKA >gi|148337405|gb|DS264454.1| GENE 856 947499 - 947585 99 28 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNSKTYTRELRKACVEAVFDTIVKEAQK >gi|148337405|gb|DS264454.1| GENE 857 947582 - 947812 248 76 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487181|ref|ZP_02028588.1| ## NR: gi|154487181|ref|ZP_02028588.1| hypothetical protein BIFADO_01022 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01022 [Bifidobacterium adolescentis L2-32] # 1 76 1 76 76 141 100.0 1e-32 MTSQLLNPPKPPESRKTMKPRIELIGTTGYAIRIQEDKSGQLIELHADGGEVLADIPEST LDNFAYTLNDDLGNMR >gi|148337405|gb|DS264454.1| GENE 858 947809 - 948003 246 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487182|ref|ZP_02028589.1| ## NR: gi|154487182|ref|ZP_02028589.1| hypothetical protein BIFADO_01023 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01023 [Bifidobacterium adolescentis L2-32] # 1 64 1 64 64 108 100.0 2e-22 MSQSFELRIIEDGTHSSDHSCLIGLRFDMADGYQEHMLNKTDLMNLRREIGRTLKELNQK KDKK >gi|148337405|gb|DS264454.1| GENE 859 948000 - 948356 349 118 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487183|ref|ZP_02028590.1| ## NR: gi|154487183|ref|ZP_02028590.1| hypothetical protein BIFADO_01024 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01024 [Bifidobacterium adolescentis L2-32] # 1 118 1 118 118 220 100.0 3e-56 MNIFQQREQILANLIEACKDHDEEKTNHLLNQLTELDKTAEQKPLPEEPKEQGFYVTAND GRLLLKDIDDDWSARTYDNSAKRIWNGNRQYVKWPTVCETLPPEAFPLKRVNTGSDDD >gi|148337405|gb|DS264454.1| GENE 860 948349 - 948579 312 76 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0888 NR:ns ## KEGG: BBPR_0888 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 76 1 73 79 96 61.0 3e-19 MTDHDYWLEDMQAMKKRKKPNYTRRRILFAIVSIGLISSLTIMLTWHGGSTTAALMVEGV YIATALWLIVRFAPRD >gi|148337405|gb|DS264454.1| GENE 861 949020 - 949325 420 101 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487186|ref|ZP_02028593.1| ## NR: gi|154487186|ref|ZP_02028593.1| hypothetical protein BIFADO_01027 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01027 [Bifidobacterium adolescentis L2-32] # 1 101 1 101 101 189 100.0 5e-47 MDGNKPQVATWVLCVDVDPDNPESDPMFIATLDMPLDGSLISVALPGNRLGECTALAART ACQAIDKVLKRHLERGGGSDTVEMLDGLHIDPMGDIRDGRP >gi|148337405|gb|DS264454.1| GENE 862 949322 - 949540 102 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487187|ref|ZP_02028594.1| ## NR: gi|154487187|ref|ZP_02028594.1| hypothetical protein BIFADO_01028 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01028 [Bifidobacterium adolescentis L2-32] # 1 72 1 72 72 128 100.0 1e-28 MTDLLTPAELAAMLGMSPRTLANWRSIGKGPPYVKIGVEPPEGHQDRRKVRYQRQIAERW ALAHEYRRTVAR >gi|148337405|gb|DS264454.1| GENE 863 949537 - 949716 100 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487188|ref|ZP_02028595.1| ## NR: gi|154487188|ref|ZP_02028595.1| hypothetical protein BIFADO_01029 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01029 [Bifidobacterium adolescentis L2-32] # 1 59 1 59 59 103 100.0 3e-21 MKNGTFIPVTRVQSRPDVKSDGKARFGDNNPTITQQGIDVDKFISDNHALIENLRKGTR >gi|148337405|gb|DS264454.1| GENE 864 949713 - 950357 687 214 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487189|ref|ZP_02028596.1| ## NR: gi|154487189|ref|ZP_02028596.1| hypothetical protein BIFADO_01030 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01030 [Bifidobacterium adolescentis L2-32] # 1 214 1 214 214 375 100.0 1e-102 MKHEYTGDELAELKKIYDESGEAGLQIGEMRALRKAGLLTPDLPPEQEAHEDILADYQAI SKPTTEPAEPSKRDLILAHCRNRIDQGQPFDGKETAEALNLSQKTAGNIIGQLRKEGLLP AFDQHSPRKTTRKNATTGKKKETMTTTVQEQKQEAEPEEPRTIIANALVGIFDAVSALQR TAFQANDKVVYGFATKLLTGELMDIKANYSKDAK >gi|148337405|gb|DS264454.1| GENE 865 950354 - 950530 207 58 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487190|ref|ZP_02028597.1| ## NR: gi|154487190|ref|ZP_02028597.1| hypothetical protein BIFADO_01031 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01031 [Bifidobacterium adolescentis L2-32] # 1 58 1 58 58 101 100.0 2e-20 MRLKFDSESGVFTIKPESEAEITKLRTSALDIANLVVDYFDADVIKADINKPSNQQGA >gi|148337405|gb|DS264454.1| GENE 866 950532 - 951494 1053 320 aa, chain + ## HITS:1 COG:BS_yqaJ KEGG:ns NR:ns ## COG: BS_yqaJ COG5377 # Protein_GI_number: 16079682 # Func_class: L Replication, recombination and repair # Function: Phage-related protein, predicted endonuclease # Organism: Bacillus subtilis # 29 315 20 318 319 102 31.0 1e-21 MKRIPLKDTERYTVERFKQGKKTERHLAWLKSRKAGVGGSDMSTILGLNSFKTPYELWLE KTGRVEPEDISDKWAVVRGNALENELRKRFRAQHSELLVTDGTDKQFISREKPYLRASLD GILQKENGDFGILEIKTASGRRAGDWHDEDGNLRIPPYYLAQVEFYALVTGWTWGYVYAA IGDDEPVEIPFEADVEDMAAIDKAATDFWHFVTTGTPPQLTGGDVQKAFPEPTPDIVDES DDDDLYDLLARYESATGMLNDTKSAQKELQEQIILRIGSHTGIKCGNLQATYKPMTRKEY TVKATTYRKFTLKTIEEKEQ >gi|148337405|gb|DS264454.1| GENE 867 951498 - 952361 1061 287 aa, chain + ## HITS:1 COG:ECs1933 KEGG:ns NR:ns ## COG: ECs1933 COG3723 # Protein_GI_number: 15831187 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecE pathway) # Organism: Escherichia coli O157:H7 # 32 249 41 246 269 135 38.0 1e-31 MGAIAQQAQGQQLQPLNPKGKLKQLVEHSWPQIARVIGGNLDSEALLQMCISSINRTPAL ADCTPVSVLSCFMQCAALGLRPSDVDGLGQAYILPYGNKNYATGEKQATFVIGYKGMLKL LENSGIYAQPRAVYEDDNIKLKLDENGVPTIECPDEVNVDADHSEDKLKFVYLSVQLPNG GRYADYMSKRDLLEYREKYAPRNRSRQITGPWVKNFVEMAKKTIIRRSFKYLPVNIEAKK AASVDETTPDYSDVFQPVITDSTDDVTAEVMDTEADSEQQADAKDGE >gi|148337405|gb|DS264454.1| GENE 868 952361 - 952846 606 161 aa, chain + ## HITS:1 COG:ML2684 KEGG:ns NR:ns ## COG: ML2684 COG0629 # Protein_GI_number: 15828449 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium leprae # 1 161 1 159 168 166 52.0 2e-41 MAGETVITIVGNLTADPEIRTLSNGGTVANFTIASTPRVYNSQANQWEDGQALFLRCSAW RDLASHCAQTLRKGMRVIAQGRLQQRSYQAQDGSNRTVIELQVDEIGPSLKYATAQVQKM QSGSYQGCNANGGYQQPQQPQQQSQAPADDPWGAPAGETDF >gi|148337405|gb|DS264454.1| GENE 869 952846 - 953013 71 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487194|ref|ZP_02028601.1| ## NR: gi|154487194|ref|ZP_02028601.1| hypothetical protein BIFADO_01035 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01035 [Bifidobacterium adolescentis L2-32] # 1 55 1 55 55 90 100.0 3e-17 MMREWIEPPDVLPVCPKHGCALYPARPIPCPECEAESEDHYADIGDADIWILEDE >gi|148337405|gb|DS264454.1| GENE 870 953010 - 953402 359 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487195|ref|ZP_02028602.1| ## NR: gi|154487195|ref|ZP_02028602.1| hypothetical protein BIFADO_01036 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01036 [Bifidobacterium adolescentis L2-32] # 1 130 1 130 130 256 100.0 4e-67 MTQETTIDVQKAYWWTQNKRGDWRAKYRRTSVVKRCAYLTYRSLINSGKLKPPAKWPVHV TAIIHPLTHGRFDPENAAPMVKAILDAITQADFWPDDNARYVVGPDYRLGEPSTEKGVYH ITIRIEEEEH >gi|148337405|gb|DS264454.1| GENE 871 953405 - 953905 509 166 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487196|ref|ZP_02028603.1| ## NR: gi|154487196|ref|ZP_02028603.1| hypothetical protein BIFADO_01037 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01037 [Bifidobacterium adolescentis L2-32] # 1 166 1 166 166 324 100.0 1e-87 MATNVTEKDKTLQEIIDWCEQLEIDGLRLANALLMQRDTTAYGVVKGQIDAYGKTADHCR SMLGYSGSMLSCLTYEDTDNSDPSDQPQVGDYGVAVRETADGQEEIPFHIEREERTGLPV ALLNERLYAKPEDDIKDGLYVSLFQLYLDGFMLSRTGRKRNKDAEA >gi|148337405|gb|DS264454.1| GENE 872 953908 - 954129 248 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487197|ref|ZP_02028604.1| ## NR: gi|154487197|ref|ZP_02028604.1| hypothetical protein BIFADO_01038 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01038 [Bifidobacterium adolescentis L2-32] # 14 73 1 60 60 115 100.0 1e-24 MWFKRRRNEFGCPMCGRLPKIVKSHTQDGDYIKSIYRLQCPRKHLSTNWYSDPMDASIQW KHVVDEYKRKDTK >gi|148337405|gb|DS264454.1| GENE 873 954126 - 954611 468 161 aa, chain + ## HITS:1 COG:no KEGG:ECL_01668 NR:ns ## KEGG: ECL_01668 # Name: not_defined # Def: putative DNA N-4 cytosine methyltransferase # Organism: E.cloacae # Pathway: not_defined # 5 158 4 157 157 201 57.0 1e-50 MSAYQPVLDPACGGRMFWFDKSDDRVLFGDVRDESWELCDGRRFDVKPDMLMDYRDLPFP DGTFRMVVLDPPHLRNAGETSYMAQKYGCLDQETWKADLKTMFSECFRVLKEHGVLIFKW NETQIPVSQILKLTAHKPLFGNKQPNRTGTHWIVFMKEDAK >gi|148337405|gb|DS264454.1| GENE 874 954608 - 954793 105 61 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487199|ref|ZP_02028606.1| ## NR: gi|154487199|ref|ZP_02028606.1| hypothetical protein BIFADO_01040 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01040 [Bifidobacterium adolescentis L2-32] # 1 61 1 61 61 122 100.0 6e-27 MNKRYKVCPLFWSDYGDERTLMNMGVFEKLLNEGWQILRVDTMPTTELRDNAVTATNVYI P >gi|148337405|gb|DS264454.1| GENE 875 954808 - 955056 273 82 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487200|ref|ZP_02028607.1| ## NR: gi|154487200|ref|ZP_02028607.1| hypothetical protein BIFADO_01041 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01041 [Bifidobacterium adolescentis L2-32] # 1 82 2 83 83 151 100.0 2e-35 MISQYDKDMCCLYIAEGMNYIWQQRGNQELSRILEQLADRKLMKRVHGGYAITLKGLLAV KVWRLHLFLFHHGEYKYFRRKK >gi|148337405|gb|DS264454.1| GENE 876 955053 - 955532 459 159 aa, chain + ## HITS:1 COG:no KEGG:Elen_0814 NR:ns ## KEGG: Elen_0814 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 2 152 6 153 166 98 39.0 1e-19 MSRAETTAMLSKLVEKRLRNQTAFWVSEVNFDRNTPDERRVDYVGFKPWNINGEPVPASV EKGCFEFYEVKSCMADFTSGNGLTFYGDQNYLVCTKELCDEIVWQKMVPPRVNAILTPDS TGSKLILDYVQSYNDLSYRRRPASEILWAMVKANGKRTN >gi|148337405|gb|DS264454.1| GENE 877 955529 - 955849 304 106 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0865 NR:ns ## KEGG: BLIF_0865 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 31 106 36 108 108 68 53.0 1e-10 MSILLDEADAYERGMDDDLTFQTVRELAGAAYMAGRSAPPTDAEVEAVAKRLLWRSWWSW DGIESDYVAKGEDDAWDYAGEICGYREDFIDRAKEVLEVERHAVTE >gi|148337405|gb|DS264454.1| GENE 878 956121 - 956402 190 93 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487203|ref|ZP_02028610.1| ## NR: gi|154487203|ref|ZP_02028610.1| hypothetical protein BIFADO_01044 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01044 [Bifidobacterium adolescentis L2-32] # 1 93 1 93 93 176 100.0 7e-43 MIGNKNIQRGLMAVLMAVTMVFPLAGCGNEAYADDAENGSNCIDMRGDFATDECRIKLHD GRTVTCIRFNVYKGGGGLSCDWDNASGKDGETK >gi|148337405|gb|DS264454.1| GENE 879 956402 - 956611 295 69 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487205|ref|ZP_02028612.1| ## NR: gi|154487205|ref|ZP_02028612.1| hypothetical protein BIFADO_01046 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01046 [Bifidobacterium adolescentis L2-32] # 1 69 1 69 69 126 100.0 7e-28 MEHELIPVYTKFNGNGVRVQNDSKLIDYLDDGWKIINVTAANPLALDNNEAVVLYVIEKT TAKSLEQTE >gi|148337405|gb|DS264454.1| GENE 880 956608 - 956955 147 115 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487206|ref|ZP_02028613.1| ## NR: gi|154487206|ref|ZP_02028613.1| hypothetical protein BIFADO_01047 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01047 [Bifidobacterium adolescentis L2-32] # 1 115 1 115 115 149 100.0 5e-35 MNEPTADEIMKMFAVDIAVLRRGRRKPSEKPPVGKKKAKASKKPVKLTAEQLARKREHTR QWRMAHREQVLECNRRYKLAHRPTFHHFSREEQAAYKRNYYLLHPEKRKRKRETV >gi|148337405|gb|DS264454.1| GENE 881 957060 - 957914 645 284 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0857 NR:ns ## KEGG: BLIF_0857 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 26 279 40 290 303 101 30.0 3e-20 MILEGVRLADCKLLRCGRERDDTRQLCPECEQRLLADLEWFTKNIGFLETDKMNRINKNH DANGGGGGYSDNPPLREQVFDLLYEGDERDDSVWGTLSAFAKCLGVEYLNHDPLNVLAQR IAVKKTKQGDPACLCSTATPVYALEIRIARDKCQRLLNQGHTVSLGNCPNTDCNMPLSAD ETAKQVKCRGCRNVWNINFLRTLMQDKIKHSTYTGTASDIRSKLQQAGYLVSANTLKSWA HRGKLTPVRKEGRHPIYRIADVYMLMQQTTPVDDIWGLVGKDAK >gi|148337405|gb|DS264454.1| GENE 882 957911 - 958198 167 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487208|ref|ZP_02028615.1| ## NR: gi|154487208|ref|ZP_02028615.1| hypothetical protein BIFADO_01049 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01049 [Bifidobacterium adolescentis L2-32] # 1 95 1 95 95 198 100.0 1e-49 MKIDLSNPPYAVKLNDLGFAYSHTDHKKGVIVYTRADPRLAGSKWVDHWDDMECIIDFED ANCMKPSSFTFKNLRNGVSKTIQASNLALVEEVIR >gi|148337405|gb|DS264454.1| GENE 883 958195 - 958356 279 53 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487209|ref|ZP_02028616.1| ## NR: gi|154487209|ref|ZP_02028616.1| hypothetical protein BIFADO_01050 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01050 [Bifidobacterium adolescentis L2-32] # 1 53 1 53 53 85 100.0 2e-15 MTATISITDKGKTVTYHAHHMRDVIEPVKKSGMFGEQFDVKKKLHTITFYTED >gi|148337405|gb|DS264454.1| GENE 884 958358 - 958573 85 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487210|ref|ZP_02028617.1| ## NR: gi|154487210|ref|ZP_02028617.1| hypothetical protein BIFADO_01051 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01051 [Bifidobacterium adolescentis L2-32] # 1 71 1 71 71 70 100.0 6e-11 MKINIDCSLILLLLSGMLALLKIGGQFPYSWIWVLAPIWIPLLALAGITIILIIAWIIGV IGVLILEKFGD >gi|148337405|gb|DS264454.1| GENE 885 958574 - 958990 336 138 aa, chain + ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 13 136 22 146 149 124 50.0 4e-29 MHISGKTNNISYAHTNDGGADLRSNEDTIICAGSQTLVHTGVRLAIPAGYVGLVCPRSGL ALKHNITVMNAPGVIDANYRGEVCVILRNMDEQAFEIHEGDRIAQIVFLPYAHMQFEPVN ELDSTERGDKGFGSSGIN >gi|148337405|gb|DS264454.1| GENE 886 959010 - 959384 369 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487212|ref|ZP_02028619.1| ## NR: gi|154487212|ref|ZP_02028619.1| hypothetical protein BIFADO_01053 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01053 [Bifidobacterium adolescentis L2-32] # 1 124 1 124 124 213 100.0 5e-54 MTVLDFTKKTTPVINKLIKLGFHYESTDKAEAEGIRNPPQLITTWENVMNGVILKIINTD AVSYDENGVLHQTPTEYVTITDDCTNISVTISVEEFMELERITNSKGTTFPPETSTVSYE RIPA >gi|148337405|gb|DS264454.1| GENE 887 959381 - 959623 376 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487213|ref|ZP_02028620.1| ## NR: gi|154487213|ref|ZP_02028620.1| hypothetical protein BIFADO_01054 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01054 [Bifidobacterium adolescentis L2-32] # 1 80 1 80 80 155 100.0 8e-37 MRIYIVTADIDNHGDIPFYGSFVSVMGVYATREHAVKRVRNLKRRKFALKHKELHGDKGV YVEEFELDSNCQKFIGGYSE >gi|148337405|gb|DS264454.1| GENE 888 959620 - 959937 322 105 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487214|ref|ZP_02028621.1| ## NR: gi|154487214|ref|ZP_02028621.1| hypothetical protein BIFADO_01055 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01055 [Bifidobacterium adolescentis L2-32] # 1 105 1 105 105 184 100.0 2e-45 MSKQVIIKAEQLNATHLGKKVTILDDGEAVMSGKLKELRATQYSMPVYSNDIEAVPNGYG SISVVPKLNYETVTDIIMHLSNQLNDDIKATVRGDTELVIEVNEK >gi|148337405|gb|DS264454.1| GENE 889 959944 - 960252 369 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487215|ref|ZP_02028622.1| ## NR: gi|154487215|ref|ZP_02028622.1| hypothetical protein BIFADO_01056 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01056 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 193 100.0 3e-48 MTENTTNKSTNELLMRVIAVESPELFDGSEDEPVRVTSYNYSEYCPAACETCGDEPEMLT IGYVTRNGREGSETYDYFGLPRVLEALDEWDKQHGKAVENRG >gi|148337405|gb|DS264454.1| GENE 890 960245 - 960559 213 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487216|ref|ZP_02028623.1| ## NR: gi|154487216|ref|ZP_02028623.1| hypothetical protein BIFADO_01057 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01057 [Bifidobacterium adolescentis L2-32] # 1 104 1 104 104 205 100.0 9e-52 MDDTSVTKSFVFTGDGNPSPDLSNFEPFGHIDEDTPKYSAIMIIEDEGVYIPVIYKECRV DLDVDNPTIHPLSGPCMECCCYSTPELAMKAGMRIYGNMLKENR >gi|148337405|gb|DS264454.1| GENE 891 960556 - 961272 693 238 aa, chain + ## HITS:1 COG:no KEGG:BL0923 NR:ns ## KEGG: BL0923 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 1 227 1 230 273 97 31.0 6e-19 MKWFTSDLHFAHPFVAALRGYALPGYAKDASIKQQAEHEHKPLKNCVDWRRHDADIIRSI NTYVGEEDELYILGDISSGGTWSVEQAIMRIQNLQVPRKRRHLILGNHELHSSSRTLEKL ASVFGEVGRVGITEIRDGWGNNPHTVFLSHYQWREDFTQSKPLGAVSTNWNAPELAEYAI PRMNNTLLLHGHTHAHDPLEFGGHHNEINVGLDAWHFEPVNEAELVDNWLQTALSVTE >gi|148337405|gb|DS264454.1| GENE 892 961353 - 962216 739 287 aa, chain - ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 14 264 19 285 304 67 27.0 3e-11 METVSDMIAGFLAGLTPGTRAGYRSVVSRWLRWCADNGIDMLRAKRTHIEVFAAYDGGMR PAAKNTVCRNLSVVCCLYRYLCEEGYIDCNPGEHVRRPKLYGHSDGTYLTREQARLFLTE ARGMGARTDALCSLLLLTGARVGEALGLDVEDCHLNDGRPWVRFDRKGDWSQRVAIPSDA AEALARLIGERRRGAVFREDSGARLRQQTAVGIVSSVALRVGVPDISPHSLRRTFCTLSR DAGVPDRDIMAAGGWNSPQMLDYYDMSRRGLNGKAGDGLQDYLGEED >gi|148337405|gb|DS264454.1| GENE 893 962204 - 963079 431 291 aa, chain - ## HITS:1 COG:no KEGG:Achl_4261 NR:ns ## KEGG: Achl_4261 # Name: not_defined # Def: hypothetical protein # Organism: A.chlorophenolicus # Pathway: not_defined # 31 289 39 292 296 83 29.0 1e-14 MTRGKNRRLRLIPSHLPLIRDKLVEYERVALKEEMAAHSQYERSMEAAWNFADNLAVAQL WWISRDMTMLAEDTVRAGDFPKSEAPAQSGLIFFDGDVQMVRFPVTDDATGRKVGDAHVS ALFWQCDGNGDIELMGFTDHPCALKECDAKSFSLPVIRFANGIFNEHVGGFRWFGDLLRA VWALSAEPHICEAKPAKPDMAHPLPQRFDPEIRKVKMLVLRENLHRPGGSADDDERVRRE YSHRFIVRGFWRDQAYGPNHSLRRRQWIPPFVKGPADKPLICKETVRIWKR >gi|148337405|gb|DS264454.1| GENE 894 963081 - 963611 499 176 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487220|ref|ZP_02028627.1| ## NR: gi|154487220|ref|ZP_02028627.1| hypothetical protein BIFADO_01061 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01061 [Bifidobacterium adolescentis L2-32] # 1 176 1 176 176 358 100.0 1e-97 MIDVNMLPRELTGYVGHVCGLWFGSYFIDFEPVFVHSTAGIIGELYEYLVDTVQDNSMNG GLDYEDAEEYAKLAATVPWSMEEIDRVAEQSFRYVSDRTLQVAYALCVLTFDAMFPQKIE VVKPDVRETLLSVAFPHDWQRRMAESDHDRVSVYRMGLECVTKAYDKVFDRLGEAD >gi|148337405|gb|DS264454.1| GENE 895 963611 - 963874 177 87 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487221|ref|ZP_02028628.1| ## NR: gi|154487221|ref|ZP_02028628.1| hypothetical protein BIFADO_01062 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01062 [Bifidobacterium adolescentis L2-32] # 1 87 1 87 87 169 100.0 8e-41 METLKLWADFHVGQQMYAYDHFDVVERKRYWRPVSKTYLVYAWLRDLIRGMRDARLGGFQ GWLYCVVKDGGFTTQEFMGFNDEIEVL >gi|148337405|gb|DS264454.1| GENE 896 963880 - 964236 224 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487222|ref|ZP_02028629.1| ## NR: gi|154487222|ref|ZP_02028629.1| hypothetical protein BIFADO_01063 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01063 [Bifidobacterium adolescentis L2-32] # 1 118 1 118 118 218 100.0 8e-56 MSRHYYAVYWPYGVNTFNFDHEPIGTVVPFDTTKARDAYVAADRFDGNFHRSAPDYRLTR KMMLEALREFRSLDSKGYEGWRVDGVFYESLGDAYKVMFDADAQLRYDLFGDVDSREA >gi|148337405|gb|DS264454.1| GENE 897 964325 - 964525 249 66 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487223|ref|ZP_02028630.1| ## NR: gi|154487223|ref|ZP_02028630.1| hypothetical protein BIFADO_01064 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01064 [Bifidobacterium adolescentis L2-32] # 1 66 1 66 66 118 100.0 1e-25 MSRVVITAQQVKAALEATGYSSIESNVQAVLREIGKRPALITAYLSTVINAAADNLPDPR HMDCLF >gi|148337405|gb|DS264454.1| GENE 898 964527 - 965660 934 377 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0838 NR:ns ## KEGG: BLIF_0838 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 268 369 149 238 248 68 47.0 6e-10 MSNKVNGLWAVNSSSVFMFFDSVNSPSAWRFEMKDGVESWRMIPGVKNAQAVRGVAAAYR ADGGTWLDPNGPDYAQAVSEIGDVPLIVERGDCMVSPDCGDYTAHGVSLSDADREHGWEL SYEDGGMVVSRDISFLTPAERDHPEMCETYDDLPVVTPQTVEPEPEPAETVSQPQQPMSE LGGHTIAEFAHEFDRIYGVLYDADGNGHSIDYGSDIDAFDNQEYPRGVLEAFNAYRKDFV SSDRESAAFIRALRSFAPAGSAAVEVVEPEPDTVEIPEVPPIPSNDTPKVIAQHGVKARV VTIPGGKSVKELADVFGGYAHKPRGFRDSKGRRVAYVAFDGKSGVVAYRDYYQRGSDQTL EESVAAYLAQHEIVEVA >gi|148337405|gb|DS264454.1| GENE 899 965728 - 966066 327 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487225|ref|ZP_02028632.1| ## NR: gi|154487225|ref|ZP_02028632.1| hypothetical protein BIFADO_01066 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01066 [Bifidobacterium adolescentis L2-32] # 1 112 1 112 112 193 100.0 4e-48 MREKVTLLVAVLVGLLAFGVACSPALSDQPVADPHGTPEQQWTWWRETYATKDYNQTDLA SYRELSDIPQCGMEDGSTSDGYERICEWRGMVDGNQSGTSYVLVSGIKVLEW >gi|148337405|gb|DS264454.1| GENE 900 966059 - 966523 464 154 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487226|ref|ZP_02028633.1| ## NR: gi|154487226|ref|ZP_02028633.1| hypothetical protein BIFADO_01067 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01067 [Bifidobacterium adolescentis L2-32] # 1 154 1 154 154 315 100.0 8e-85 MCSSNQFFVSDYMDVDKIPDNRHFQPLTFVTEVKWNDGKTYYVFAPHADAPGRNGLFFIR EPYIEDVFKRINATVDVYVLDNKLTFSPDCLTINDGRRVPFRWDVEYTYRLRKTYFAGRS PYAFIRLLVQPWWNARTHAALTGIGYIKAGVANA >gi|148337405|gb|DS264454.1| GENE 901 966614 - 966913 142 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487227|ref|ZP_02028634.1| ## NR: gi|154487227|ref|ZP_02028634.1| hypothetical protein BIFADO_01068 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01068 [Bifidobacterium adolescentis L2-32] # 1 99 1 99 99 169 100.0 9e-41 MCEKCPIDQRYPYYGFPVTPDSHKLRDEAERYREIAIRCFVAESDCADVKRADALWREMC RAGDEARFLCSNARRLEMEEALQCRAIEYPNCPNRKRMR >gi|148337405|gb|DS264454.1| GENE 902 966924 - 967310 382 128 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487228|ref|ZP_02028635.1| ## NR: gi|154487228|ref|ZP_02028635.1| hypothetical protein BIFADO_01069 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01069 [Bifidobacterium adolescentis L2-32] # 1 128 1 128 128 252 100.0 8e-66 MYTVDETYKNIEAEFKPRSKWDQGVKDTALALLDSLDMPETALPDHFGSRRALLLNGADN WREYSYGGCALVCNVDIAARFFTPSEMRRYMADGHDASMAFRGEPLLDLQARALSQAERV ISRYARER >gi|148337405|gb|DS264454.1| GENE 903 967482 - 967697 312 71 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0015 NR:ns ## KEGG: BBIF_0015 # Name: not_defined # Def: hypothetical protein with the helix-turn-helix motif # Organism: B.bifidum # Pathway: not_defined # 1 71 1 71 71 105 87.0 6e-22 MSLKELRMKRGLTQRELAQRSGVHHVEIAQIETGKRNVRAVSLDTALRLCDALKIANPRK LLDSDSKSSAE >gi|148337405|gb|DS264454.1| GENE 904 968166 - 968453 144 95 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFQRAFSVSTREQAALLFAPGGHSPTGVFAAWCNVGTFVRLCFGVSCGIARARSSYAIMS VPVVAVVAMAWLWPCRGRRALGVVASLDMAVVTWP >gi|148337405|gb|DS264454.1| GENE 905 969473 - 969763 56 96 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487230|ref|ZP_02028637.1| ## NR: gi|154487230|ref|ZP_02028637.1| hypothetical protein BIFADO_01074 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01074 [Bifidobacterium adolescentis L2-32] # 1 96 17 112 199 153 98.0 5e-36 MDGITNLMVNLIPIPSAQANIPVIILDRPLAPMPIPFKNHRTDTRPIRIEPFITMGTRPR HNASTKTGLAGAEQENTPKGKHPSRKSSQINQPKAS >gi|148337405|gb|DS264454.1| GENE 906 969916 - 970404 264 162 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487231|ref|ZP_02028638.1| ## NR: gi|154487231|ref|ZP_02028638.1| hypothetical protein BIFADO_01075 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01075 [Bifidobacterium adolescentis L2-32] # 82 162 1 81 81 159 100.0 8e-38 MCAVAGCANPVCAKGLCRSHYDRDRYSGSPLKPLRQRMCPQCHTWFDPKRSDQLFCSGRC RVAYKRARDDDKSLPVKPETTMYVRPVDVSELESELVVESFTDSQVVEKCGGLCAKCHEL VDVGSSGADGAAFVWKVPLEKSHSATLANRLLVHKRCEGGTS >gi|148337405|gb|DS264454.1| GENE 907 970512 - 970904 308 130 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0829 NR:ns ## KEGG: BLIF_0829 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 117 11 127 131 117 59.0 1e-25 MGLEFPAVRPDGQEWLERTKKWYESLRVSPLAQRMGVEADWYAVQDLALLKDDFWRPKTK GRWMLASEIRQREATLGITPEARVRLKFDAPQPDDMKASAYEGDTEGARNVQRNRQRASA LGLRVIDGGA >gi|148337405|gb|DS264454.1| GENE 908 970904 - 972778 1420 624 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0828 NR:ns ## KEGG: BLIF_0828 # Name: not_defined # Def: phage protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 615 1 625 638 642 52.0 0 MHTRIPELHGEDLTRSMGMFAVWWIETFFRVGRGGGVGLPEAFDMDEYVFMLHAYALTEW GTRRFNRVFYSRAKGKNKSGKAAGICAFEGLAPCRFDHWAEEGETYEFLGEVYPYAKGEP VGRMVQMPQILCLATAEGQTGNIFDSIYYNCDQGPLSQLKGVGLDVGRTRIGLPEGGEIV PTTSGAASKDGGLETFAACDETHLYNTNKLRNMYKTVQRNLGKRKGDADPWILETSTMYK PGEESIAETSYKYAWDTASGKIKHRSGIYFDHVYANIDLDDFADEKKVLRALQVAYGASA KSSDGKDHLILPDGRMTVLNADGVDPEGHTYWDGELGPSKDGWIDLNGQMDQIYQPDSDP ADSMRYYFNTLSSVHDAWLTESDIQSHMLYRDEMHTAFNSIRLDGAWQRFVTKREPITLG FDGSVSDDSTALVGCRVSDGMLFLIKLESAPDGPEKATWRVNRDAFDGMARWMMDNYNVV GFFADVAYFEQMIGGWEKDYGKKLKVGPRKSGDKIKFWTNNWYKDMQVALDNAHTAFRYP YTEPDKKSKPVKDDIALLADPRLVNHFRNARRRETRTGYAIYKESPNSPDKIDACMAGLL AYTARGKYLELAEVKRRSAPMRIY >gi|148337405|gb|DS264454.1| GENE 909 972807 - 974402 1256 531 aa, chain + ## HITS:1 COG:no KEGG:Blon_1549 NR:ns ## KEGG: Blon_1549 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 511 7 516 540 320 37.0 1e-85 MIKNASDDDDDAYVITNLAREWGARLPYLAELKLFKDGREMVDANSVPQGTDPNAAPVYK LMRQLGVVNLARRISESVTDRQQPNGFRKVEDSSLKDTDADRMAKQCGLNFILRRNMLPD KGDYGCSFGLVSNAGRGRFITPLSPWECWMDVGETAAIQYTYLDRENKEVIRLYRLVVDD SKTTTKVYSKTAQREHDRSVVDPNDVSSVAKFASDAKAWEPGSDWEWAEDSQASDFSYAE GCDSLPIVRLSTVDGQGLFEPYLPMLKRIDRETFDRLCITMMQAFRQRAIKGTVPTTYTE EDQEVIDGDKQAGDPIDLASTFAVGPAALWKLPDGVDIWESQTTDTGSLQNNIMADVKQL ASAAGIPLDILSPDVQGSANGAELKRETLKFKVQTMNELDSEPIVRMVRMALAASKTANA SASEFEMVWKPMDTTSSLEQAQACQLLYQSGLLARRTILTHKMGFTAQDVSEDDMNRLAD QFNISGQANKSNAKPVAAVEPATGWDDETQSAVDGLPNVEGELVDEGESES >gi|148337405|gb|DS264454.1| GENE 910 974402 - 975487 755 361 aa, chain + ## HITS:1 COG:no KEGG:Blon_1550 NR:ns ## KEGG: Blon_1550 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 5 361 2 358 358 483 68.0 1e-135 MAGKSLESLSNTLEQARATLVNQYVSQAHRMWDMLTPADWWNDGMTFAVASRMALLEMAL IQQVRRLGVSYANETLKLVGVTPKGDVPSLVFPRDNTDPWLVAQRPADTYRSLAVKNPTI RPETWPSKTDEIFSEVDKWIEQAFNRLQTTVDEDVSRAQTSATLERYKDSKVLEYRRVLH PELSKTGSCGLCVVAADRWYSTADLLPLHANCHCGVAPAGSDYDPGFQLNQKDLKRLYAE AGGTTASALKQVKVKTITHGELGPVLLAEDAKDTPSPVPSKASDAWHTPDRKSTLAQCRR MENRAIEFNRRYKEVQKAGKPVTFRYEGRTFTFKPSKNLKQAMAWQKTMLNQMRSMLGEA A >gi|148337405|gb|DS264454.1| GENE 911 975512 - 976093 532 193 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487236|ref|ZP_02028643.1| ## NR: gi|154487236|ref|ZP_02028643.1| hypothetical protein BIFADO_01080 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01080 [Bifidobacterium adolescentis L2-32] # 1 193 1 193 193 292 100.0 1e-77 MADENTNTAETAASTNAPETGVTAQPKDTATSPVAADTATQKNGADDLSEKLGMWKHQAR ENEQKMYENRDRANAAEAKLADTEGALAKANVQIARLQAQKLHPEITDEAFDTLCGETEP EKISEWADAFVKFMPSKTETVEAGQKKNDGNAPCEPSPELAKELQSRNMHVCKPQSSVSD AYNYGVKHSEIKK >gi|148337405|gb|DS264454.1| GENE 912 976112 - 976639 917 175 aa, chain + ## HITS:1 COG:no KEGG:Blon_1552 NR:ns ## KEGG: Blon_1552 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 154 1 156 264 93 39.0 3e-18 MANQMVHTVAKTAPKDDQSWLINRITDGVREAQLDLSTFTNDKSHENDYFASITDDDYEA WTKSGIPLAQITGTNNYGPYDPNASDGRNGTIIGFLESQVHVQFTRTGFEDQYPTVGVRY MGVIDKKNLPYTVDFSKAKLEGLFLDYDKGAAAPHVTVLNPATAAASASDTSHTA >gi|148337405|gb|DS264454.1| GENE 913 976707 - 977777 1062 356 aa, chain + ## HITS:1 COG:no KEGG:Blon_1553 NR:ns ## KEGG: Blon_1553 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 4 355 5 356 356 196 35.0 2e-48 MSLLNKDIITPDEASAIVLGAYQTTTAALPFASILPDQFTGLSVEWTPNQDDPEVDEMKF STWDAEAPYGRTVGGEKLSYTSMLPLRKRMRVSEKDIANGNISMTNGDLKTTLSDYFVQL GKELAYRLEKARVAVAVDAKLGITESNEDAAWDYARDSALSTSLASTKTWDKTGDPVKDL RAWSDLIDDKKGARPTIMVTTRKVVNALTSNAAIINYLFRGQGSTLPALVSENDVKSVLS LYTGIQDIYVVDERYRDFARQSKITLPGGVKSFFPENTILLIPAFGDVNMGYTALGPTAE AQTPAYGISREKNAGPIGAVLNTPSSTPGYEAYVNGTALPVLVQSNSTLKATVLAA >gi|148337405|gb|DS264454.1| GENE 914 977792 - 978229 322 145 aa, chain + ## HITS:1 COG:no KEGG:Blon_1554 NR:ns ## KEGG: Blon_1554 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 4 144 2 142 143 128 45.0 7e-29 MSTAIIDNIDWLKYMRVYGSADADSFKEHFDTDWISAQCRKAALICLSECPIVRTRLKKG RLSESDFASVVCEMVLRVVRFNRFKTEANGSYSYTEHDPQQNQPGHDPSPRLFLSKAEKS ILNGFAESAGTMSHISLGFDPGYGG >gi|148337405|gb|DS264454.1| GENE 915 978232 - 978759 414 175 aa, chain + ## HITS:1 COG:no KEGG:Blon_1555 NR:ns ## KEGG: Blon_1555 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 14 169 22 177 187 221 73.0 1e-56 MAFLFDDDTNERHYLYEDDQTDYGGQKQLFDTDYVVVIPRKHVQDAHGGQYVQTGDPVKV ICCVEGRAQQAGMFSISGAEDKTPSSDNPGGLEEVTPLQILAREWPGDIYSRIWYKGDYY DADGAPTWRGHGSRFSRHWEVRARRVVIGDYLDGGISEPEWVKEVGGVGKGHGST >gi|148337405|gb|DS264454.1| GENE 916 978734 - 979087 208 117 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487241|ref|ZP_02028648.1| ## NR: gi|154487241|ref|ZP_02028648.1| hypothetical protein BIFADO_01085 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01085 [Bifidobacterium adolescentis L2-32] # 17 117 1 101 101 189 100.0 4e-47 MGRVTVRRSVATDIAKMYGPELTRRAAVHSVSAVRAKANEAATHSSVADRIEVSVRKVGW HHQIVMSVMGRDGTQIAPHLEFGYFNRWLEHKYGPRDPRARIPGKHIMFDSLSRVRL >gi|148337405|gb|DS264454.1| GENE 917 979084 - 979548 340 154 aa, chain + ## HITS:1 COG:no KEGG:Blon_1557 NR:ns ## KEGG: Blon_1557 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 150 2 150 152 203 66.0 2e-51 MTDNIFQRLAIDVRESIDAEQLVYELLNRAYPCEEWPDVKVCSELDLPLNAYGERGQVLL YYVSAPEQFDRGLWRFGVTFTVLAADCNNPHGFARHLYKTVQGWPFEESTTAGTVGTVSV TAQKRQSDSKENQGKNVKEYGLSAVVTARDSFKA >gi|148337405|gb|DS264454.1| GENE 918 979602 - 980213 716 203 aa, chain + ## HITS:1 COG:no KEGG:Blon_1558 NR:ns ## KEGG: Blon_1558 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 200 1 200 201 260 70.0 2e-68 MAINADGLIQASRGTLFTAPAKTALPTKVSSFLLNSGTVAAAGSGSVVNWENIGHTSNNN KISFSKDGGDTTTKDTWLVAGAKSSTEAPTITVSGASVQGDSATITKVTGGWAGEQGGIV VPLQPVVQHLALFVLAYDDSDKLSFGLYLPETDFTFDNVSLADEDFAEFSFNAVVKSTSV LKAGANGEVGAYQIFAPETFVSK >gi|148337405|gb|DS264454.1| GENE 919 980378 - 980800 348 140 aa, chain + ## HITS:1 COG:no KEGG:Blon_1559 NR:ns ## KEGG: Blon_1559 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 2 140 3 138 140 102 42.0 4e-21 MASKTDKNTVKTVPEIPDTLAEFVEQHEELAGCPEFVPAHEFSVAQTCDFMVVDAVASDS YGVFRKKTSDDVDSSLAIARMVAASDSFFEKIAKDVDAYHKWVTGRTPTVLVQVFTLLNA FYGASLGKSEASRTPTGNAK >gi|148337405|gb|DS264454.1| GENE 920 980851 - 981189 390 112 aa, chain + ## HITS:1 COG:no KEGG:Blon_1560 NR:ns ## KEGG: Blon_1560 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 110 5 114 116 124 56.0 2e-27 MHEYDGGFLLTLIGGLAGYDESLYREWLLNHPDERARAESDSDSGLSFHGFTQDTSLLLG IYNQVGLLVSGTLQFKDGKHPEFKPIMPPHAADGVDRRVSANFESMKAFLGM >gi|148337405|gb|DS264454.1| GENE 921 981209 - 985924 4405 1571 aa, chain + ## HITS:1 COG:no KEGG:Blon_1561 NR:ns ## KEGG: Blon_1561 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 1571 1 1610 1612 1471 52.0 0 MVEYLAGSVGIDIYPNTKGFGEELRRKLARYADDDFDVRVTPDVDMSRWRAAKRRIEDDG IVQNVEIRGDDSDLKRVLRDIDKRKVSPKVELTDALRDLRTMRKQVQSSDKAVSAMNKRI ANGGDAWRKVTLKSKSYQDAVKRNTRLTTAYANKQIDVLDNVKKHIRSMQDAIEKVKPLG SSNNVSMARANRLVEQLDNAMQQLKHDSKANIRVDVNDVSEVVNVLENVSKRLKQVDGMD AHAKVYLDGAKSMERELEALKRKFRSLPNDIETDYRSAIDKLNLAAFHAGKDKNYHYEVN LDLDVTRAREKAKKLQEDYKKLEMDIDLKTAGARTHLAMLTRPRSVEIYAKLHATDFGKM LDGMTYGATGLRAVNNQFQKFVNFMDSLDEKVPFFSALGTVFAGVSAGAINMSRSVLGVG SSIVSMSKAALAAPAALVGLGAAYASVKMIWGEKGATWSEQIDIASTKLGKLSDSVVNAF YGQARPAIRGLADSIADTLIPQMSTLADHEGRIVVGMTKMVKEADKTSVVSSIFNDVNKS LTYLEPGVESLVKAFLNLGDSTSQYLPRATRYVSELADQFARWVDNARASGEIEKSMQRV IEQAGYLKNSVKALMGIASGLYSALAEDQNGIQSFSKELQKADKAVNSAKFQDTLKSWAV GAKVAQSAMRDSFSEIGDAGYSLRHTVGNVFGDAGRTIASFTKNVSRLLKNSSGGISDFS SGVSNGFQKVFNAVGDVSPMFSQLLSTVGQLSKTFGGTLAASLRASAPLIQAIATAAEAV AKAFSALPEPIQAALGVFATFGKAGKTALDTVKLAVVENTMKSLQWQKVLMELGVTSTDT GVTLKNVAQGWVASNPAVSEFVSKVSSAEGAMGKVKAVASGLGGMLASTLASPATWGIAA VTAAVAAYSDYNAKAQATERASENIATALGKIPDSAAEASGALSNVASAIQDAFKDDNYA ETGFNWLDDWTTGFKNTADAADKLGISTTGLSKAASGSTKAYNSMMNQLKATYDAHSTYS ATATQNYGNEAGAAKKLITVMEKARQQYIDNAEATSIANGHAEGYAKKLIEMGEDSDSVS IAIATQSQRQQMLNSATQKYNDIVNNQRTAQQNALSVATEYGQIYNGLGDSIQRIKELGV QNVWDNAANSFNNMTEAGQLAQTSLQNLATTGHDWLEQLVASGASTDEVNAKQQELSTQF YETAKAMGVPESEIQKLQQLYGLTPEEVKTLFKTETEQSKQNLTSYLSDLRALFPGEGNT AIFTTVLDGINSGALSSADEVQSTVNNLMNNASTDGSGKYTIVLDADGNQAVVATDEVRK HADLFKKGTDGNGYTTNLKASDLASMTIDYLKGDANAYGSLRPTASLGARDNTQPAKRSA ENTANQWNGSTYNAQFGGNISGSFWGMLGTLWNEGRSWASRTFNAIFGTKRGRATGGEVE GDNVPRTGRIVGRGTNTSDSIALNDSTDVSTGEYVVRAAAVHSMEALYGKGVMSAINASG DIPSQYLKNARRMTRVSMPSIVSDYSAGSSDDVKFESGPTYNITQNFQYPTITPISVQTN QKLDKAAMIGM >gi|148337405|gb|DS264454.1| GENE 922 985937 - 986830 571 297 aa, chain + ## HITS:1 COG:no KEGG:Blon_1562 NR:ns ## KEGG: Blon_1562 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 297 2 316 316 240 45.0 6e-62 MAFSTCFYKLNNVPLDSENCIVTVGSTLLSAISVDRTVSTVPQRHGSIPSGMTPRFSERQ LSLQVCAWEPDVLGESSRLMRLCTMPNLVMSRIIDGVEQRTRVELTSLSPDDSKSHPNRF VPFTAVFAMPDVWWRSVTHETVSLPLNGGKVMSGGSVMPSAGYYTFWQGVPNASPSVLST QLPYSCGDAPITDMVFRFPKGVTGITVKDTVSGTGITWSGTRVDARPYLYLDAGSLTAWS SDSDSAWSGGSQNETVGLDYLPSGRLQINPDVSGDYRIAVKATGSGNVACRFKRSWW >gi|148337405|gb|DS264454.1| GENE 923 986870 - 992110 5195 1746 aa, chain + ## HITS:1 COG:no KEGG:Blon_1825 NR:ns ## KEGG: Blon_1825 # Name: not_defined # Def: fibronectin, type III domain protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 1008 1 1024 1363 706 45.0 0 MGKTLKSRLVAYQANGSKLGLLPEPTSYTVSFTHDAVGALTVSYSRKALRGEILDRRLET GLEIAVEVSDGGRWIEPYNGRFVIASRSRNALDVSDTVSLTGVSYGWLLKKALNLDTSRL ETKGDEKGTRKFANANAGTIMRTFMDENWNRGGVKVDCSRFTSGADSAGKQWGYMLPSIY YDLGISIQDVLDSLVNNGLCDWRTDVRQLLLWNADSVAVCRDLSKSCVVTLAQDVSEAPD DESIDGLASSILVRGDNINFRQDNPDAPKPWGGWELYSSQQGVNKKETAEHLIKPTLANA ARVRGQYTRSVNVVEASCLPLIDYTIGDWITAPTVANREKVRVQQVTLQLDSTGFKASLI LNDKNYDSSVRLTKRMNGITGGAHLGGASGAIPAPEKDHRVPKAPQNLSANSDAYINVNG YARGMVTARWDDVTLATDGTAMDITSYVVEYRVNKNGYEWHSAGTTTEHTLSWSNLDCGV QILIRVRAVPSYSDQMGEWSSVFALTVAKDTTPPPVPSKPILSSEFGVVSVNWDGKTADG GSMPIDWDRNILGERLTNGSFKEIAAVSTGIGDYVITGLTAGTSHTYAFRAVDHAGNKSD WSAIATVTVASAVSPDEVKQIQKDLADNQTALKDNSAKLTQAQKDIAANQQAQAATSKEL ESAKADIKANQSAIGTANATLKDNTSKIAQAQKDIQANKSNLDAASKTLAQAKTDLTQAQ KDIAQTKSDLTTANGEISKAKKSAAQAYAEAHSKNHTFRGPDMPKDNLIVGDLWLKTQKY WTRWRGEKNNSPSLLADFYTYWLGTPNASPSVLVPLSDRVIDTLVWDGAAWNHMGYADVE RNADEIAQAKSDIADNAAKTTDAKKTAENAAAAAKNAQGTADTATGAAKTAQDTANAAQT AAKSATTTAGQAKSAADAAQTAAESAKKTAGNAETLANTANESAKAAKSDASTAKTDAAN AKTTAANASSVATQAKATADSAAQSATDAATAARKANTAAAAAAGVANGKADVLIQGTAP ATSMRKASTLWIDTTNGANTPKRWNGSAWVAVTDKAATDAANAAVKANDAAKTAQATADK ASTAAANAASQANQAQAAAKKAQTTADGKNLIYRGPDEPNHDGLKPGDMWWRTQKYWTRW KGEKNNSPSMLADFYTYWQGTPNASPSVLVPLADRVVEVLTWDGTRFEPFDLVANNILAA GTVAAKHLAADSVTAEKVKANAITVDKLAANSVTTEKLVADAVTATKLAANSVQARNIVA LAITSDKIAANSVTTGKLKVTEDMTVALLNVHKIQAGDIAANAITTDKLAAGAVNADKLA ANSVTAGKVQTNAIGTDKLAANAVTTAKLKVTEDMTVALLNVHKIQAGDIAANAVTTDKL AANAVNADKLAANSVNASKIVTGAITADKLAANSVTAVKIAAGTITSDKVAAGQFKGYVF TGAIFQSSEAENTGMKLNGTALQMWDSNHNRTVYLDGEGKSNLLTGTFQTRTSGHRVRIS PDYQTYIIGGSETFTGDGIEFPAYNGSTAYFSHPAIASVIQSNQVGAMGELDLWSGHVSK NDPAAFMSLRSKPRKKGGTGSGGVTSRVHAVANTDYDEADESKKSSAFLTLSGDSANGSE CWLEAQDANGEVGVGANIGTGYVYLGGYLGGITNRFTFHAQAAWKAWYPNPGSKIATGAS MQVDCTFSPTKYGHYYVVANADSQWAGIIAHPMNTGGQSGFTLKLYNADQPCPVDVYAEF LAYLVK >gi|148337405|gb|DS264454.1| GENE 924 992123 - 992692 413 189 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487249|ref|ZP_02028656.1| ## NR: gi|154487249|ref|ZP_02028656.1| hypothetical protein BIFADO_01093 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01093 [Bifidobacterium adolescentis L2-32] # 1 189 5 193 193 334 99.0 2e-90 MSATFETDENSGLCIIRCNPPINGSDSFVFTPDVIASWKALLGLASTREAIAAIMQGRED TSRYDPKTGRGVWTGAFEALESALTDSATSVSMLSADGEVLDDPLTAARNETRAGMRLPV MSNETDARLVATLAADDAGVEPSSGIDTACTRDVDGLDDFLSDESSQAMLDECEERFYAS LMPRQNQQN >gi|148337405|gb|DS264454.1| GENE 925 992704 - 993018 419 104 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487251|ref|ZP_02028658.1| ## NR: gi|154487251|ref|ZP_02028658.1| hypothetical protein BIFADO_01095 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01095 [Bifidobacterium adolescentis L2-32] # 1 104 1 104 104 147 100.0 2e-34 MADVTTETTTDTVPAVTPAEPSGVLDLRPPKESVRAELCRLGLEFSSTDGTSESWRDYQR GVLATFDDSGASVTLTDVKTNLGRTLTLDELKAVTRIDTMTAAD >gi|148337405|gb|DS264454.1| GENE 926 993090 - 993263 241 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487252|ref|ZP_02028659.1| ## NR: gi|154487252|ref|ZP_02028659.1| hypothetical protein BIFADO_01096 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01096 [Bifidobacterium adolescentis L2-32] # 1 57 1 57 57 73 100.0 5e-12 MTQIPADANDVIDTLSAQIGTLNKQNAILTSQLAAAMKLIPQDVLDATKGVDDDIED >gi|148337405|gb|DS264454.1| GENE 927 993247 - 993744 535 165 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487253|ref|ZP_02028660.1| ## NR: gi|154487253|ref|ZP_02028660.1| hypothetical protein BIFADO_01097 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01097 [Bifidobacterium adolescentis L2-32] # 1 165 2 166 166 329 100.0 4e-89 MTLRINWFPDPNITQTVKPYAPSTVKVDFPVVARRNWLRATVLTVGDGYAQYPLQGDRIP PAGTYHVHCCAFAKHANAFTRVYMKVGGKYTVPLQKEIADGTTVDVDGTITIPDGCEELI IRTTAGNVVGAIGMMSDILIERADTYDAAVGGLPGFFTGDTMPRD >gi|148337405|gb|DS264454.1| GENE 928 993772 - 994140 298 122 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487254|ref|ZP_02028661.1| ## NR: gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] # 1 122 1 122 122 213 100.0 4e-54 MMVTNLCTSPSSTITLKADKWVNITTLPSVNGATYQISVEVNVTGGTISIIGADGDINAR QRVSYKMIINNSHPISMSYHVKSGSPTVTVTNMLICTWDEYQANKTLLDSIKYFNGDTMP RA Prediction of potential genes in microbial genomes Time: Tue Jun 28 03:15:48 2011 Seq name: gi|148337404|gb|DS264455.1| Bifidobacterium adolescentis L2-32 Scfld0235 genomic scaffold, whole genome shotgun sequence Length of sequence - 289944 bp Number of predicted genes - 271, with homology - 262 Number of transcription units - 121, operones - 61 average op.length - 3.5 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . + CDS 2 - 169 206 ## gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 2 1 Op 2 . + CDS 189 - 581 343 ## gi|154487270|ref|ZP_02028677.1| hypothetical protein BIFADO_01114 3 1 Op 3 . + CDS 636 - 992 256 ## BBIF_0111 hypothetical protein + Term 1018 - 1052 5.1 4 2 Op 1 . + CDS 1064 - 2323 1364 ## BLD_1135 phage lysin-like lysozyme M1 5 2 Op 2 . + CDS 2335 - 2610 368 ## Blon_1099 hypothetical protein + Term 2643 - 2689 15.1 6 3 Op 1 . - CDS 2697 - 3035 230 ## gi|154487274|ref|ZP_02028681.1| hypothetical protein BIFADO_01118 7 3 Op 2 . - CDS 3025 - 4392 1103 ## Blon_1490 phage integrase family protein - Prom 4516 - 4575 2.7 + Prom 4476 - 4535 4.2 8 4 Tu 1 . + CDS 4753 - 5703 1404 ## COG3049 Penicillin V acylase and related amidases 9 5 Op 1 . + CDS 5915 - 6388 693 ## BAD_0855 regulatory protein 10 5 Op 2 . + CDS 6485 - 7243 817 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit + Term 7277 - 7318 6.2 - Term 7260 - 7310 10.0 11 6 Tu 1 . - CDS 7341 - 8462 1728 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 8566 - 8625 2.8 12 7 Tu 1 . + CDS 8607 - 9632 1180 ## COG0053 Predicted Co/Zn/Cd cation transporters + Term 9671 - 9708 7.2 - Term 9659 - 9694 5.2 13 8 Op 1 . - CDS 9733 - 11334 181 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 14 8 Op 2 . - CDS 11417 - 12133 681 ## COG3910 Predicted ATPase + Prom 12070 - 12129 3.6 15 9 Tu 1 . + CDS 12377 - 12982 698 ## COG1335 Amidases related to nicotinamidase + Term 13146 - 13198 8.1 16 10 Tu 1 . - CDS 13267 - 13755 223 ## gi|154487284|ref|ZP_02028691.1| hypothetical protein BIFADO_01128 - Prom 13777 - 13836 2.2 17 11 Tu 1 . + CDS 14658 - 15668 1222 ## COG4767 Glycopeptide antibiotics resistance protein + Term 15866 - 15901 5.1 + TRNA 15784 - 15859 76.4 # Gly GCC 0 0 - Term 15853 - 15890 4.1 18 12 Op 1 . - CDS 15957 - 16322 536 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 19 12 Op 2 . - CDS 16371 - 16652 115 ## BAD_0846 protein TrkB involved in potassium or sodium transport - Prom 16857 - 16916 1.6 + Prom 16411 - 16470 1.6 20 13 Tu 1 . + CDS 16531 - 16656 182 ## gi|154487291|ref|ZP_02028698.1| hypothetical protein BIFADO_01136 + Term 16675 - 16733 23.1 21 14 Tu 1 . + CDS 16823 - 17218 509 ## BBMN68_841 membrane protein + Term 17219 - 17245 -0.6 22 15 Op 1 . + CDS 17347 - 18843 1663 ## BAD_0844 hypothetical protein 23 15 Op 2 . + CDS 18846 - 19685 962 ## BAD_0843 hypothetical protein 24 15 Op 3 3/0.000 + CDS 19685 - 23143 3695 ## COG4913 Uncharacterized protein conserved in bacteria 25 15 Op 4 . + CDS 23145 - 24377 1199 ## COG4924 Uncharacterized protein conserved in bacteria 26 15 Op 5 1/0.059 + CDS 24453 - 27440 3508 ## COG0178 Excinuclease ATPase subunit 27 15 Op 6 . + CDS 27437 - 29779 2303 ## COG0322 Nuclease subunit of the excinuclease complex 28 15 Op 7 . + CDS 29845 - 30783 826 ## COG0169 Shikimate 5-dehydrogenase 29 15 Op 8 . + CDS 30783 - 31715 1042 ## COG1660 Predicted P-loop-containing kinase 30 15 Op 9 . + CDS 31870 - 32820 956 ## COG1481 Uncharacterized protein conserved in bacteria + Term 32830 - 32898 11.6 + Prom 32844 - 32903 3.4 31 16 Op 1 13/0.000 + CDS 32952 - 34157 1783 ## COG0126 3-phosphoglycerate kinase + Term 34169 - 34227 14.0 32 16 Op 2 9/0.000 + CDS 34283 - 35077 732 ## COG0149 Triosephosphate isomerase 33 16 Op 3 . + CDS 35122 - 35424 362 ## COG1314 Preprotein translocase subunit SecG + Term 35438 - 35487 16.9 34 17 Tu 1 . + CDS 35512 - 36360 897 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 36422 - 36481 4.5 35 18 Tu 1 . + CDS 36515 - 38047 1536 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 38075 - 38110 6.1 - Term 38135 - 38178 11.7 36 19 Op 1 13/0.000 - CDS 38218 - 39321 1612 ## COG0176 Transaldolase 37 19 Op 2 . - CDS 39411 - 41519 2904 ## COG0021 Transketolase + Prom 41628 - 41687 2.3 38 20 Op 1 3/0.000 + CDS 41894 - 43021 1085 ## COG1420 Transcriptional regulator of heat shock gene 39 20 Op 2 . + CDS 43074 - 44225 1320 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain + Term 44261 - 44313 14.9 - Term 44249 - 44301 14.9 40 21 Tu 1 . - CDS 44333 - 45154 865 ## COG3001 Fructosamine-3-kinase - Prom 45270 - 45329 2.1 + Prom 45188 - 45247 2.2 41 22 Tu 1 . + CDS 45293 - 46177 1324 ## COG1968 Uncharacterized bacitracin resistance protein + Term 46201 - 46245 11.3 42 23 Tu 1 . - CDS 46269 - 47078 884 ## BAD_0824 hypothetical protein - Prom 47266 - 47325 78.5 + TRNA 47249 - 47324 76.7 # Gly GCC 0 0 + TRNA 47352 - 47422 54.7 # Cys GCA 0 0 + TRNA 47463 - 47534 74.3 # Val GAC 0 0 + TRNA 47565 - 47640 80.0 # Val CAC 0 0 43 24 Op 1 . + CDS 47914 - 48045 263 ## 44 24 Op 2 . + CDS 48113 - 48337 214 ## BDP_1154 hypothetical protein 45 24 Op 3 4/0.000 + CDS 48410 - 48856 584 ## COG1716 FOG: FHA domain + Term 48901 - 48953 15.2 46 25 Op 1 . + CDS 48966 - 49586 407 ## COG0789 Predicted transcriptional regulators 47 25 Op 2 . + CDS 49652 - 50017 328 ## BDP_1157 hypothetical protein - Term 50120 - 50167 13.1 48 26 Tu 1 . - CDS 50199 - 50912 913 ## COG0546 Predicted phosphatases - Prom 50957 - 51016 4.2 - Term 50954 - 50990 6.3 49 27 Tu 1 . - CDS 51018 - 51365 304 ## BAD_0819 hypothetical protein 50 28 Op 1 . - CDS 51474 - 54077 2381 ## COG4581 Superfamily II RNA helicase 51 28 Op 2 . - CDS 54092 - 54409 239 ## BDP_1161 hypothetical protein 52 28 Op 3 . - CDS 54423 - 56336 1691 ## BAD_0817 hypothetical protein 53 29 Tu 1 . - CDS 56479 - 57858 1493 ## COG4284 UDP-glucose pyrophosphorylase + TRNA 58154 - 58230 87.1 # Pro GGG 0 0 + Prom 58156 - 58215 79.8 54 30 Tu 1 . + CDS 58455 - 58868 263 ## BDP_1164 hypothetical protein + Term 58937 - 58985 15.9 - Term 58920 - 58975 11.4 55 31 Op 1 . - CDS 58994 - 61123 2320 ## COG1160 Predicted GTPases 56 31 Op 2 . - CDS 61120 - 61893 947 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 61977 - 62036 2.7 + Prom 61913 - 61972 2.0 57 32 Tu 1 . + CDS 62006 - 62941 1184 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 63000 - 63040 9.4 - Term 62788 - 62830 6.4 58 33 Tu 1 . - CDS 62855 - 63139 240 ## BLD_0460 hypothetical protein - Term 63185 - 63251 20.6 59 34 Op 1 . - CDS 63296 - 64924 1898 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 60 34 Op 2 . - CDS 64872 - 66257 567 ## BAD_0810 hypothetical protein 61 34 Op 3 39/0.000 - CDS 66257 - 67180 920 ## COG0074 Succinyl-CoA synthetase, alpha subunit 62 34 Op 4 . - CDS 67182 - 68369 1373 ## COG0045 Succinyl-CoA synthetase, beta subunit 63 34 Op 5 . - CDS 68421 - 69002 400 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 69035 - 69094 5.2 - Term 69055 - 69102 13.4 64 35 Tu 1 . - CDS 69118 - 69486 531 ## BAD_0806 hypothetical protein - Prom 69523 - 69582 4.3 65 36 Op 1 29/0.000 - CDS 69588 - 70661 997 ## COG2255 Holliday junction resolvasome, helicase subunit 66 36 Op 2 14/0.000 - CDS 70673 - 71290 491 ## COG0632 Holliday junction resolvasome, DNA-binding subunit 67 36 Op 3 8/0.000 - CDS 71338 - 71919 381 ## COG0817 Holliday junction resolvasome, endonuclease subunit 68 36 Op 4 . - CDS 71926 - 72681 965 ## COG0217 Uncharacterized conserved protein 69 37 Tu 1 . - CDS 72812 - 73474 694 ## COG0558 Phosphatidylglycerophosphate synthase - Prom 73494 - 73553 1.5 - Term 73489 - 73548 18.0 70 38 Op 1 . - CDS 73588 - 75621 2977 ## COG0441 Threonyl-tRNA synthetase 71 38 Op 2 5/0.000 - CDS 75783 - 76610 866 ## COG3879 Uncharacterized protein conserved in bacteria 72 38 Op 3 5/0.000 - CDS 76617 - 76949 400 ## COG3856 Uncharacterized conserved protein (small basic protein) 73 38 Op 4 2/0.029 - CDS 76949 - 77920 707 ## COG3879 Uncharacterized protein conserved in bacteria 74 38 Op 5 . - CDS 77928 - 78539 612 ## COG0558 Phosphatidylglycerophosphate synthase 75 38 Op 6 3/0.000 - CDS 78553 - 79404 728 ## COG0040 ATP phosphoribosyltransferase - Term 79410 - 79446 3.0 76 38 Op 7 . - CDS 79456 - 79719 453 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 77 38 Op 8 . - CDS 79749 - 80414 820 ## COG0036 Pentose-5-phosphate-3-epimerase 78 38 Op 9 3/0.000 - CDS 80449 - 81459 1020 ## COG0682 Prolipoprotein diacylglyceryltransferase 79 38 Op 10 37/0.000 - CDS 81529 - 82404 352 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 80 38 Op 11 . - CDS 82422 - 84515 2238 ## COG0133 Tryptophan synthase beta chain 81 38 Op 12 . - CDS 84559 - 86115 1287 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 82 38 Op 13 24/0.000 - CDS 86112 - 86519 306 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 83 38 Op 14 . - CDS 86583 - 87353 704 ## COG0107 Imidazoleglycerol-phosphate synthase 84 39 Op 1 2/0.029 - CDS 87468 - 88637 838 ## COG0820 Predicted Fe-S-cluster redox enzyme 85 39 Op 2 7/0.000 - CDS 88654 - 89640 727 ## COG0575 CDP-diglyceride synthetase 86 39 Op 3 33/0.000 - CDS 89697 - 90251 834 ## COG0233 Ribosome recycling factor 87 39 Op 4 24/0.000 - CDS 90304 - 91053 906 ## COG0528 Uridylate kinase - Prom 91077 - 91136 3.4 - Term 91140 - 91179 10.0 88 40 Op 1 38/0.000 - CDS 91233 - 92108 393 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 92119 - 92163 1.6 89 40 Op 2 . - CDS 92184 - 93077 1509 ## PROTEIN SUPPORTED gi|119025799|ref|YP_909644.1| 30S ribosomal protein S2 - Term 93193 - 93239 16.5 90 41 Op 1 . - CDS 93264 - 93749 412 ## COG0242 N-formylmethionyl-tRNA deformylase 91 41 Op 2 . - CDS 93752 - 95791 1822 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Term 95822 - 95870 13.3 92 42 Tu 1 . - CDS 95909 - 96559 343 ## BAD_0778 hypothetical protein - Prom 96619 - 96678 4.0 - Term 96625 - 96669 12.1 93 43 Tu 1 . - CDS 96708 - 97826 1187 ## COG0516 IMP dehydrogenase/GMP reductase + Prom 97865 - 97924 2.4 94 44 Op 1 . + CDS 97962 - 99182 1670 ## COG0538 Isocitrate dehydrogenases + Term 99202 - 99245 7.3 + Prom 99211 - 99270 2.7 95 44 Op 2 . + CDS 99304 - 100812 1191 ## BAD_0775 hypothetical protein + Term 100836 - 100892 18.8 96 45 Tu 1 . - CDS 100892 - 102721 1564 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 102752 - 102811 2.2 97 46 Tu 1 . - CDS 102834 - 103415 19 ## COG0739 Membrane proteins related to metalloendopeptidases + Prom 103371 - 103430 1.7 98 47 Tu 1 . + CDS 103569 - 104009 336 ## BDP_1211 hypothetical protein - TRNA 104066 - 104138 79.7 # Asn GTT 0 0 - TRNA 104166 - 104238 81.0 # Asn GTT 0 0 - Term 104246 - 104301 -1.0 99 48 Tu 1 . - CDS 104339 - 105040 187 ## PROTEIN SUPPORTED gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein - Prom 105087 - 105146 2.6 + Prom 105046 - 105105 3.1 100 49 Tu 1 . + CDS 105147 - 106922 973 ## COG0063 Predicted sugar kinase 101 50 Tu 1 . - CDS 106938 - 109322 2795 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Prom 109727 - 109786 3.8 102 51 Op 1 . + CDS 109971 - 110606 716 ## COG1011 Predicted hydrolase (HAD superfamily) + Prom 110673 - 110732 2.0 103 51 Op 2 . + CDS 110768 - 111691 1400 ## COG0583 Transcriptional regulator + Term 111720 - 111764 7.1 - Term 111708 - 111751 11.5 104 52 Op 1 1/0.059 - CDS 111811 - 112506 1104 ## COG0461 Orotate phosphoribosyltransferase 105 52 Op 2 13/0.000 - CDS 112543 - 113490 1283 ## COG0167 Dihydroorotate dehydrogenase 106 52 Op 3 1/0.059 - CDS 113493 - 114311 920 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 107 52 Op 4 . - CDS 114351 - 115313 1276 ## COG0284 Orotidine-5'-phosphate decarboxylase 108 52 Op 5 . - CDS 115313 - 116731 1639 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 109 52 Op 6 19/0.000 - CDS 116736 - 117155 648 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 110 52 Op 7 . - CDS 117155 - 118117 1196 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 111 53 Tu 1 . - CDS 118277 - 121378 3396 ## COG1391 Glutamine synthetase adenylyltransferase - Prom 121401 - 121460 1.7 - Term 121408 - 121453 14.4 112 54 Op 1 9/0.000 - CDS 121480 - 122319 958 ## COG0685 5,10-methylenetetrahydrofolate reductase 113 54 Op 2 . - CDS 122362 - 124668 3403 ## COG0620 Methionine synthase II (cobalamin-independent) - Prom 124699 - 124758 2.9 114 55 Tu 1 . - CDS 124850 - 125254 392 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 125291 - 125350 2.6 115 56 Op 1 . - CDS 125385 - 126029 907 ## COG2062 Phosphohistidine phosphatase SixA 116 56 Op 2 . - CDS 126044 - 127099 1040 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 117 57 Tu 1 . - CDS 127260 - 128111 975 ## COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 118 58 Op 1 . - CDS 128248 - 129666 1450 ## COG0438 Glycosyltransferase - Term 129675 - 129721 9.0 119 58 Op 2 . - CDS 129740 - 130201 386 ## BAD_0750 hypothetical protein - Term 130249 - 130295 14.0 120 59 Op 1 21/0.000 - CDS 130323 - 131870 1767 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases 121 59 Op 2 . - CDS 131872 - 136443 6014 ## COG0069 Glutamate synthase domain 2 - Prom 136497 - 136556 4.6 122 60 Op 1 4/0.000 - CDS 136655 - 137818 850 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 123 60 Op 2 . - CDS 137826 - 139706 2343 ## COG0481 Membrane GTPase LepA - Prom 139733 - 139792 2.3 + Prom 139767 - 139826 3.2 124 61 Tu 1 . + CDS 139863 - 140123 403 ## PROTEIN SUPPORTED gi|119025763|ref|YP_909608.1| 30S ribosomal protein S20 + Term 140144 - 140192 15.2 - Term 140139 - 140174 8.8 125 62 Tu 1 . - CDS 140212 - 140952 972 ## COG2860 Predicted membrane protein - Prom 140991 - 141050 2.9 - Term 141025 - 141098 19.9 126 63 Op 1 . - CDS 141146 - 142273 1556 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase - Term 142422 - 142474 12.1 127 63 Op 2 . - CDS 142523 - 143137 991 ## PROTEIN SUPPORTED gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25 - Prom 143260 - 143319 4.2 128 64 Tu 1 . + CDS 143392 - 144393 861 ## COG1073 Hydrolases of the alpha/beta superfamily + Term 144558 - 144592 0.7 - Term 144420 - 144467 1.7 129 65 Tu 1 . - CDS 144497 - 144910 427 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases + Prom 144830 - 144889 1.6 130 66 Tu 1 . + CDS 144934 - 147486 1639 ## COG0178 Excinuclease ATPase subunit 131 67 Op 1 . - CDS 147514 - 148182 265 ## BAD_0739 hypothetical protein 132 67 Op 2 . - CDS 148167 - 149153 268 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Prom 149250 - 149309 2.3 + Prom 149110 - 149169 1.8 133 68 Tu 1 . + CDS 149274 - 149573 69 ## 134 69 Op 1 . - CDS 149708 - 150394 256 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 135 69 Op 2 . - CDS 150394 - 151011 614 ## BAD_0736 hypothetical protein - Prom 151042 - 151101 1.7 - Term 151064 - 151108 1.0 136 70 Op 1 11/0.000 - CDS 151192 - 151566 132 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 137 70 Op 2 . - CDS 151566 - 152099 313 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 138 71 Op 1 . - CDS 152253 - 153629 580 ## COG0477 Permeases of the major facilitator superfamily 139 71 Op 2 . - CDS 153626 - 154102 303 ## BAD_0732 MarR family regulatory protein - Term 154214 - 154259 11.0 140 72 Tu 1 . - CDS 154278 - 154685 552 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain - Prom 154719 - 154778 1.7 + Prom 154659 - 154718 2.4 141 73 Op 1 . + CDS 154880 - 154975 131 ## 142 73 Op 2 . + CDS 155051 - 155449 455 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 143 74 Op 1 1/0.059 - CDS 155473 - 156252 697 ## COG0789 Predicted transcriptional regulators - Term 156268 - 156296 -1.0 144 74 Op 2 . - CDS 156330 - 157679 1610 ## COG0534 Na+-driven multidrug efflux pump 145 75 Tu 1 . - CDS 157798 - 159165 1046 ## BAD_0727 putative riboflavin-specific deaminase - Term 159300 - 159341 10.2 146 76 Op 1 17/0.000 - CDS 159372 - 160817 2104 ## COG1282 NAD/NADP transhydrogenase beta subunit 147 76 Op 2 10/0.000 - CDS 160818 - 161123 572 ## COG3288 NAD/NADP transhydrogenase alpha subunit 148 76 Op 3 . - CDS 161128 - 162273 1507 ## COG3288 NAD/NADP transhydrogenase alpha subunit - Prom 162319 - 162378 3.3 + Prom 162417 - 162476 3.1 149 77 Tu 1 . + CDS 162509 - 164545 2686 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 164580 - 164616 6.2 - Term 164568 - 164604 6.2 150 78 Op 1 1/0.059 - CDS 164738 - 165736 1274 ## COG1159 GTPase 151 78 Op 2 13/0.000 - CDS 165729 - 167147 1412 ## COG1253 Hemolysins and related proteins containing CBS domains 152 78 Op 3 17/0.000 - CDS 167196 - 167741 718 ## COG0319 Predicted metal-dependent hydrolase 153 78 Op 4 . - CDS 167742 - 168875 1253 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 154 78 Op 5 . - CDS 168920 - 169255 521 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 155 78 Op 6 . - CDS 169350 - 170219 954 ## COG1385 Uncharacterized protein conserved in bacteria - Prom 170302 - 170361 80.3 + TRNA 170269 - 170359 58.2 # Leu GAG 0 0 + Prom 170284 - 170343 80.4 156 79 Op 1 . + CDS 170424 - 171302 645 ## COG0566 rRNA methylases 157 79 Op 2 . + CDS 171482 - 172726 1595 ## COG0448 ADP-glucose pyrophosphorylase + Term 172739 - 172795 21.5 - Term 172734 - 172774 7.2 158 80 Op 1 4/0.000 - CDS 172844 - 173431 678 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Prom 173470 - 173529 2.7 159 80 Op 2 19/0.000 - CDS 173536 - 174087 617 ## COG0822 NifU homolog involved in Fe-S cluster formation 160 80 Op 3 4/0.000 - CDS 174094 - 175368 1282 ## COG0520 Selenocysteine lyase 161 80 Op 4 41/0.000 - CDS 175365 - 176144 1191 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 162 80 Op 5 12/0.000 - CDS 176160 - 177383 1371 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 163 80 Op 6 . - CDS 177389 - 178909 2004 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component - Term 178990 - 179032 7.2 164 81 Op 1 . - CDS 179068 - 180729 2143 ## COG0504 CTP synthase (UTP-ammonia lyase) - Term 180773 - 180815 11.0 165 81 Op 2 . - CDS 180855 - 186161 6923 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases - Prom 186308 - 186367 2.5 - Term 186405 - 186442 -0.1 166 82 Tu 1 . - CDS 186480 - 187979 1207 ## COG0366 Glycosidases - Term 188081 - 188122 9.0 167 83 Op 1 5/0.000 - CDS 188147 - 188596 654 ## COG0757 3-dehydroquinate dehydratase II 168 83 Op 2 7/0.000 - CDS 188633 - 190261 1791 ## COG0337 3-dehydroquinate synthetase 169 83 Op 3 . - CDS 190270 - 191463 1237 ## COG0082 Chorismate synthase 170 84 Tu 1 . + CDS 191513 - 191983 489 ## BDP_1024 hypothetical protein 171 85 Op 1 4/0.000 - CDS 191996 - 193183 1259 ## COG1559 Predicted periplasmic solute-binding protein 172 85 Op 2 9/0.000 - CDS 193198 - 193653 227 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 173 85 Op 3 . - CDS 193664 - 196342 3252 ## COG0013 Alanyl-tRNA synthetase 174 85 Op 4 . - CDS 196431 - 196667 266 ## BDP_1020 hypothetical protein 175 85 Op 5 . - CDS 196667 - 197056 480 ## BAD_0699 secreted protein - Term 197108 - 197134 -1.0 176 85 Op 6 . - CDS 197143 - 197817 612 ## COG0406 Fructose-2,6-bisphosphatase - Prom 197885 - 197944 3.1 - Term 197866 - 197915 17.1 177 86 Op 1 . - CDS 197961 - 198587 1048 ## PROTEIN SUPPORTED gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 - Term 198703 - 198743 3.2 178 86 Op 2 36/0.000 - CDS 198857 - 199672 257 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 179 86 Op 3 . - CDS 199672 - 200883 1092 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 180 86 Op 4 . - CDS 200885 - 201283 392 ## BAD_0694 hypothetical protein - Prom 201308 - 201367 2.9 181 87 Tu 1 . - CDS 201419 - 204058 2559 ## COG0210 Superfamily I DNA and RNA helicases + Prom 204133 - 204192 2.2 182 88 Op 1 7/0.000 + CDS 204259 - 204840 850 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 183 88 Op 2 . + CDS 204884 - 206275 357 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 + Term 206308 - 206354 12.7 - Term 206296 - 206342 12.7 184 89 Op 1 . - CDS 206396 - 208216 992 ## COG1835 Predicted acyltransferases - Prom 208341 - 208400 1.9 185 89 Op 2 21/0.000 - CDS 208432 - 209661 1825 ## COG0282 Acetate kinase 186 89 Op 3 . - CDS 209751 - 211421 1707 ## COG0280 Phosphotransacetylase - Prom 211476 - 211535 1.8 - Term 211546 - 211597 15.3 187 90 Tu 1 . - CDS 211624 - 214101 3179 ## COG3957 Phosphoketolase - Prom 214228 - 214287 2.8 188 91 Op 1 . + CDS 214100 - 214378 129 ## + Prom 214466 - 214525 3.4 189 91 Op 2 . + CDS 214558 - 216120 2243 ## COG0519 GMP synthase, PP-ATPase domain/subunit + Term 216141 - 216199 22.4 - Term 216192 - 216224 -0.3 190 92 Tu 1 . - CDS 216258 - 217598 640 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase - Prom 217696 - 217755 2.6 191 93 Op 1 . + CDS 217722 - 218087 382 ## BDP_1017 hypothetical protein 192 93 Op 2 . + CDS 218109 - 218285 194 ## - TRNA 218152 - 218228 85.3 # Pro TGG 0 0 193 93 Op 3 . + CDS 218328 - 219497 1172 ## BAD_0684 hypothetical protein + Term 219537 - 219584 11.2 - Term 219525 - 219570 10.4 194 94 Op 1 . - CDS 219585 - 221729 2505 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 195 94 Op 2 . - CDS 221816 - 222439 447 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 196 94 Op 3 . - CDS 222446 - 223351 885 ## COG0327 Uncharacterized conserved protein 197 94 Op 4 . - CDS 223404 - 226091 2183 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains - Term 226174 - 226201 -0.8 198 95 Tu 1 . - CDS 226240 - 227004 957 ## COG3707 Response regulator with putative antiterminator output domain - Prom 227169 - 227228 3.0 - TRNA 227085 - 227158 48.2 # Leu CAA 0 0 - Term 227236 - 227280 13.2 199 96 Op 1 . - CDS 227313 - 228755 1827 ## COG0469 Pyruvate kinase - Prom 228811 - 228870 1.9 200 96 Op 2 . - CDS 228929 - 229912 1372 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance 201 96 Op 3 . - CDS 229952 - 232063 2372 ## COG0556 Helicase subunit of the DNA excision repair complex 202 96 Op 4 . - CDS 232047 - 232484 219 ## COG0237 Dephospho-CoA kinase 203 96 Op 5 3/0.000 - CDS 232514 - 232687 139 ## COG0237 Dephospho-CoA kinase - Term 232715 - 232764 16.8 204 96 Op 6 . - CDS 232807 - 234279 2489 ## PROTEIN SUPPORTED gi|119025692|ref|YP_909537.1| 30S ribosomal protein S1 - Prom 234352 - 234411 3.0 - Term 234373 - 234415 12.4 205 97 Tu 1 . - CDS 234433 - 235308 726 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Prom 235319 - 235378 2.3 206 98 Op 1 25/0.000 + CDS 235454 - 236521 1064 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin + Term 236548 - 236596 10.1 + Prom 236638 - 236697 2.2 207 98 Op 2 42/0.000 + CDS 236721 - 237584 781 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 208 98 Op 3 . + CDS 237587 - 238423 901 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 209 99 Op 1 1/0.059 - CDS 238432 - 238908 556 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 210 99 Op 2 . - CDS 238919 - 239515 676 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD - Prom 239545 - 239604 3.1 + Prom 239532 - 239591 2.2 211 100 Op 1 . + CDS 239653 - 241908 2450 ## COG0296 1,4-alpha-glucan branching enzyme 212 100 Op 2 40/0.000 + CDS 241924 - 242646 790 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 213 100 Op 3 . + CDS 242671 - 243747 958 ## COG0642 Signal transduction histidine kinase 214 101 Op 1 1/0.059 - CDS 243752 - 244438 393 ## COG1040 Predicted amidophosphoribosyltransferases 215 101 Op 2 . - CDS 244479 - 245285 643 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 245276 - 245335 2.3 216 102 Tu 1 . + CDS 245362 - 245790 361 ## BAD_0662 hypothetical protein + Term 245874 - 245910 1.1 217 103 Op 1 . - CDS 245794 - 247245 1277 ## BAD_0661 hypothetical protein 218 103 Op 2 . - CDS 247320 - 250424 1862 ## BAD_0660 hypothetical protein 219 103 Op 3 . - CDS 250458 - 250769 347 ## BAD_0659 WhiB-type transcription regulator - Prom 250808 - 250867 4.6 + Prom 250816 - 250875 3.8 220 104 Tu 1 . + CDS 251022 - 252425 1396 ## COG1316 Transcriptional regulator - Term 252174 - 252244 5.2 221 105 Tu 1 . - CDS 252388 - 252678 120 ## - Prom 252883 - 252942 1.7 222 106 Tu 1 . + CDS 252881 - 253843 908 ## COG1316 Transcriptional regulator 223 107 Tu 1 . + CDS 254003 - 255700 477 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins + Prom 255706 - 255765 4.4 224 108 Tu 1 . + CDS 255804 - 256082 313 ## BAD_0655 WhiB-type transcription regulator + Term 256243 - 256285 1.7 - Term 256002 - 256039 3.8 225 109 Tu 1 . - CDS 256165 - 257691 1765 ## COG3920 Signal transduction histidine kinase + Prom 257654 - 257713 4.9 226 110 Tu 1 . + CDS 257784 - 258671 948 ## COG1272 Predicted membrane protein, hemolysin III homolog + Term 258707 - 258760 9.1 - Term 258695 - 258746 10.0 227 111 Op 1 . - CDS 258769 - 259248 790 ## COG0782 Transcription elongation factor 228 111 Op 2 . - CDS 259287 - 259694 644 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 229 111 Op 3 . - CDS 259747 - 261207 1193 ## COG1760 L-serine deaminase 230 111 Op 4 . - CDS 261241 - 261816 702 ## BAD_0649 Cd efflux system component - Prom 261855 - 261914 4.1 - Term 262018 - 262058 0.7 231 112 Tu 1 . - CDS 262066 - 263235 869 ## COG0582 Integrase - Prom 263273 - 263332 2.7 232 113 Tu 1 . - CDS 263345 - 263644 218 ## gi|154487524|ref|ZP_02028931.1| hypothetical protein BIFADO_01379 - Prom 263882 - 263941 3.5 233 114 Tu 1 . + CDS 263689 - 263895 310 ## BBPR_0874 GP28 phagic protein - Term 263890 - 263937 13.2 234 115 Tu 1 . - CDS 263956 - 264657 561 ## BLJ_1803 hypothetical protein - Prom 264712 - 264771 4.8 - Term 264721 - 264778 8.1 235 116 Op 1 . - CDS 264826 - 265104 444 ## BBIF_0114 hypothetical protein 236 116 Op 2 . - CDS 265116 - 265916 803 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) 237 116 Op 3 . - CDS 265919 - 266038 187 ## - Term 266065 - 266098 4.5 238 117 Op 1 . - CDS 266112 - 266198 68 ## 239 117 Op 2 . - CDS 266195 - 266551 373 ## BBIF_0111 hypothetical protein 240 117 Op 3 . - CDS 266606 - 266998 326 ## gi|154487531|ref|ZP_02028938.1| hypothetical protein BIFADO_01386 241 117 Op 4 . - CDS 267018 - 267386 210 ## gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 242 117 Op 5 . - CDS 267414 - 267881 542 ## gi|154487534|ref|ZP_02028941.1| hypothetical protein BIFADO_01389 243 117 Op 6 . - CDS 267868 - 268038 195 ## gi|154487535|ref|ZP_02028942.1| hypothetical protein BIFADO_01390 - Term 268048 - 268087 9.8 244 118 Op 1 . - CDS 268110 - 268424 381 ## gi|154487536|ref|ZP_02028943.1| hypothetical protein BIFADO_01391 245 118 Op 2 . - CDS 268436 - 268990 328 ## gi|154487537|ref|ZP_02028944.1| hypothetical protein BIFADO_01392 246 118 Op 3 . - CDS 269003 - 273958 4781 ## Blon_1825 fibronectin, type III domain protein 247 118 Op 4 . - CDS 273962 - 274867 683 ## Blon_1562 hypothetical protein 248 118 Op 5 . - CDS 274884 - 277661 2608 ## COG5412 Phage-related protein 249 118 Op 6 . - CDS 277686 - 278012 239 ## gi|154487541|ref|ZP_02028948.1| hypothetical protein BIFADO_01396 250 118 Op 7 . - CDS 278009 - 278431 550 ## gi|154487542|ref|ZP_02028949.1| hypothetical protein BIFADO_01397 - Term 278466 - 278519 5.1 251 119 Op 1 . - CDS 278536 - 278802 231 ## gi|154487543|ref|ZP_02028950.1| hypothetical protein BIFADO_01398 252 119 Op 2 . - CDS 278808 - 279407 831 ## gi|154487544|ref|ZP_02028951.1| hypothetical protein BIFADO_01399 253 119 Op 3 . - CDS 279420 - 279851 452 ## gi|154487545|ref|ZP_02028952.1| hypothetical protein BIFADO_01400 254 119 Op 4 . - CDS 279851 - 280138 306 ## gi|154487546|ref|ZP_02028953.1| hypothetical protein BIFADO_01401 255 119 Op 5 . - CDS 280141 - 280539 340 ## gi|154487547|ref|ZP_02028954.1| hypothetical protein BIFADO_01402 256 119 Op 6 . - CDS 280536 - 281051 335 ## Srot_1162 hypothetical protein 257 119 Op 7 . - CDS 281066 - 281413 498 ## gi|154487549|ref|ZP_02028956.1| hypothetical protein BIFADO_01404 258 119 Op 8 . - CDS 281423 - 282625 1602 ## Srot_1164 phage capsid protein 259 119 Op 9 . - CDS 282622 - 283389 918 ## COG3740 Phage head maturation protease 260 119 Op 10 . - CDS 283386 - 284669 1262 ## SCAB_64881 phage portal protein 261 119 Op 11 . - CDS 284687 - 286300 1159 ## Srot_1167 terminase 262 119 Op 12 . - CDS 286311 - 286649 394 ## gi|154487554|ref|ZP_02028961.1| hypothetical protein BIFADO_01409 263 120 Op 1 . - CDS 286855 - 287307 -229 ## 264 120 Op 2 . - CDS 287335 - 287952 216 ## HMPREF0424_0975 hypothetical protein 265 121 Op 1 . - CDS 288084 - 288251 222 ## gi|154487557|ref|ZP_02028964.1| hypothetical protein BIFADO_01413 266 121 Op 2 . - CDS 288224 - 288436 276 ## gi|154487558|ref|ZP_02028965.1| hypothetical protein BIFADO_01414 267 121 Op 3 . - CDS 288433 - 288585 151 ## gi|154487559|ref|ZP_02028966.1| hypothetical protein BIFADO_01415 268 121 Op 4 . - CDS 288582 - 289373 496 ## BLIF_0859 hypothetical protein 269 121 Op 5 . - CDS 289373 - 289552 138 ## gi|154487561|ref|ZP_02028968.1| hypothetical protein BIFADO_01417 270 121 Op 6 . - CDS 289546 - 289680 131 ## gi|154487562|ref|ZP_02028969.1| hypothetical protein BIFADO_01418 271 121 Op 7 . - CDS 289677 - 289904 435 ## gi|154487563|ref|ZP_02028970.1| hypothetical protein BIFADO_01419 Predicted protein(s) >gi|148337404|gb|DS264455.1| GENE 1 2 - 169 206 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487254|ref|ZP_02028661.1| ## NR: gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] # 1 55 68 122 122 104 100.0 2e-21 IINNSHPISMSYHVKSGSPTVTVTNMLICTWDEYQANKTLLDSIKYFNGDTMPRA >gi|148337404|gb|DS264455.1| GENE 2 189 - 581 343 130 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487270|ref|ZP_02028677.1| ## NR: gi|154487270|ref|ZP_02028677.1| hypothetical protein BIFADO_01114 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01114 [Bifidobacterium adolescentis L2-32] # 1 130 1 130 130 238 100.0 1e-61 MTLIVNHCVMPKDGVSVKTTNTTPSDITFTGLTAGVKYHASVVCYMLSTSGDNPRLRLTT NGSDSGLVTSNGRVDYVFTAASTTHGILVGLNNCTVNLSKGLCVPQDQWQQLVSLGLPGN YFDGDTMPKD >gi|148337404|gb|DS264455.1| GENE 3 636 - 992 256 118 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0111 NR:ns ## KEGG: BBIF_0111 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 118 12 129 129 211 83.0 1e-53 MGGACAVITLGLKVWPGALESLATGLYAHVNPERLPYNSVLSQHFAKTRQLGERSERFDG RLDELCRDTIKNTLISLIYGDQSHDHSEAVRYELAKLEKLDAHCWIVAAAEKYLEERH >gi|148337404|gb|DS264455.1| GENE 4 1064 - 2323 1364 419 aa, chain + ## HITS:1 COG:no KEGG:BLD_1135 NR:ns ## KEGG: BLD_1135 # Name: acm # Def: phage lysin-like lysozyme M1 # Organism: B.longum_DJO10A # Pathway: not_defined # 16 419 5 411 411 330 48.0 1e-88 MKIFGKKSPKHKKIPRNMRLPFAGLVVALCMIIAPIASANMNVIDVSGWQSADVTRVVDA DAAVVKVTEGGGYVNPSWRSQIDWARQTGKACGGYHYADGGNVTAEVNHYLNQFNGYVGQ CVLALDWESYGNHAWGNGDWVRQWVNQVYSRTKVWPMVYVQDSAVYQIPSDVRSHCMLWK AQYASMNATGWQSTPWNAGSKGEGMVQYASTGYLNGVGPLDLNLFFGERDAWQKIANGDR GKTKTEVRHDPVKPQVTTTPDYNDMATKVIRGVYGNGNERRQALGGAYDRVMAIVNQRLG GGSTVSAPANTNCGSVCVTVKSGDTLSTIAARNGGSWNQYTGYRSGNPNIIYAGETVCRR GTGVARQPVSNTYSTHRYTVRSGDTLSGIAGYYKVNMYSIHGYRSGNPALIYPGETLYW >gi|148337404|gb|DS264455.1| GENE 5 2335 - 2610 368 91 aa, chain + ## HITS:1 COG:no KEGG:Blon_1099 NR:ns ## KEGG: Blon_1099 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 24 88 17 81 86 80 60.0 2e-14 MVDEVKETQNDGEKPQEETGEENNYILPDEAYKVLKWLALIALPALAVFVHVVGPAWNLP CVDQIVTTLNALAVLVGALIGASELKAKYSA >gi|148337404|gb|DS264455.1| GENE 6 2697 - 3035 230 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487274|ref|ZP_02028681.1| ## NR: gi|154487274|ref|ZP_02028681.1| hypothetical protein BIFADO_01118 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01118 [Bifidobacterium adolescentis L2-32] # 1 112 1 112 112 222 100.0 6e-57 MPHELDVVSYREGYGRGFDEALKLVERYGFVFNAPRMVINGAGYDTWHPEDEFPKKITIT ENQLDIEKHTAVQTVVDYIREKFCTMYQNRYYDQMGQQIDFGDGDRANRTTE >gi|148337404|gb|DS264455.1| GENE 7 3025 - 4392 1103 455 aa, chain - ## HITS:1 COG:no KEGG:Blon_1490 NR:ns ## KEGG: Blon_1490 # Name: not_defined # Def: phage integrase family protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 450 1 463 463 375 41.0 1e-102 MARKARNGIVYPYKVERKKKLADGTIKAYPSFEFKIDGKTYSCKKYADANRRLTELLQER AKFGSTSNTSVTLGAYAEQWLERRQRDADPKTFANYRTIVRKHLRPYHSQKMSNLNAAVC DRIVNGLTVAKTIDGKKMHVKASLSLRRQTHTTLNQICNAAVADRILPTNPMGGVPTPKD KDISLADERKNEAHERTAFTDDEAKRILQAANELGIRNGAREWFRLCTGMRPGEILGASL QDLELTTTANGIPYGEYTVNWKLEELKKEHGCGEPDRKGVYPCGYKRGAACPQWRWRIPD GFDMIELQGRWCLTPPKSKRGRKVPIIPALAQTLEAYLVDTAEIPNPHGLLFRHDDGSPI EPEEDIEQFRRLLEAAGVPNAKHRSRHETRHTVVTILMSMGVDVGLVEEIVGHSSRLMVE HYRHAGLKERLAAMETMNSALDLKQIEQKGVVNAA >gi|148337404|gb|DS264455.1| GENE 8 4753 - 5703 1404 316 aa, chain + ## HITS:1 COG:BS_yxeI KEGG:ns NR:ns ## COG: BS_yxeI COG3049 # Protein_GI_number: 16081005 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Penicillin V acylase and related amidases # Organism: Bacillus subtilis # 1 311 1 312 328 161 30.0 1e-39 MCTGVRFSDEEGNMYFGRNLDWSFSYGESILATPRGYHYDNVFGASGKATPNAVIGVGVV MADRPMYFDCANEHGLAIAGLNFPGYAEFVHEPVEGTDNVATFEFPLWVARNFDSVDEVE EALKNVTLVSQIVPGQQESLLHWIIGDSERSIVVEQMADGMHVHHDDVDVLTNQPTFGFH MENLRNYMCVGNEMAEPATWGKASLSAWGAGVSMHGIPGDVSSPSRFVRVAYANTHYPQQ EGEAANVSRLFHTLGSVQMVDGMAKMGNGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSY AMADFDMDSSELITAA >gi|148337404|gb|DS264455.1| GENE 9 5915 - 6388 693 157 aa, chain + ## HITS:1 COG:no KEGG:BAD_0855 NR:ns ## KEGG: BAD_0855 # Name: merR # Def: regulatory protein # Organism: B.adolescentis # Pathway: not_defined # 16 157 1 142 142 263 98.0 2e-69 MSNTTTTWHSIREASMISGLPESTLRYYEQIGIIDPIARDPSSGHRVYSDKDIESLTTIA CLAATSMPLESMREYLKNRFDGPEGARRQIELLDAQSLRLAAKAEALRIQQAYVSLKSLY WRAIAEGHEDEANRILEENKDVIENVKKQPGKGAIAR >gi|148337404|gb|DS264455.1| GENE 10 6485 - 7243 817 252 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 6 250 11 248 250 227 43.0 1e-59 MFEELHRKMNAFWNNDRTLSQTDPEFVKLFSDFAYDEVINEPGANHPDLDDKTRSLAILA ALVGCQGLDAFEMMLPVAYETGLTSVAIKEMIYQATAYCGFSRTLPFLKKLNVFLGAANV HLPLEPQGTTTSETRAQAGEDKQVEIFGENMRGFAQSGPEETRHINKWLADNCFGDYYTR GGLSTREREMVTLCFLAAQGGCEPQLTAHAKANMAVGNEKAFLIAVVSQCMPYIGYPRTL NAIRCIDEAVKG >gi|148337404|gb|DS264455.1| GENE 11 7341 - 8462 1728 373 aa, chain - ## HITS:1 COG:CPn0143 KEGG:ns NR:ns ## COG: CPn0143 COG0620 # Protein_GI_number: 15618067 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Chlamydophila pneumoniae CWL029 # 1 371 1 373 374 391 53.0 1e-109 MAYSHNAPFRADVVGSYLRPAELKAAREDFAAGKIDAAALKAVEDKAITELVAKQKAAGL HVITDGEFRRGWWHFDFMWGFNGVDHAAAAHRVAFHDEVTPADTATVTGRISGENHPFVE HFKFVKQFEDENTVARQTMPSPAQTRFVLTGNAAAYPYDEFYKNDDELTADIVAAYRQVI ADLYAAGCRNVQFDDCTWTRLCDASVRERLGWSDEDALRLQQENLDVINAVIADQPDDLV INTHVCRGNFHSTWLSSGGYAPVAAKLFGEENVDAYYLEFDDDRSGDFAPLAEVSGDKKV VLGLITSKKPDLEDPDTIKARIQEAAQYIPLDRLCLSTQCGFASTQEGNKLTEDQQWAKI ALVQSIAKDVWGE >gi|148337404|gb|DS264455.1| GENE 12 8607 - 9632 1180 341 aa, chain + ## HITS:1 COG:L67760 KEGG:ns NR:ns ## COG: L67760 COG0053 # Protein_GI_number: 15673428 # Func_class: P Inorganic ion transport and metabolism # Function: Predicted Co/Zn/Cd cation transporters # Organism: Lactococcus lactis # 29 341 11 311 314 165 37.0 1e-40 MSESRDPAGDSTTTNNMGEVREAEHQGAAVKAALGANIGVAIAKLLAAFFTGSSAMLSES VHSIADCSNEIVLMVGGRFSKRKTDGDHPFGLYRAKYLASFVVATLLFFVGGFFSTSEAV KKLVAISADPALRDVNRMELLVAFIVVVISACLEGFGLHQSIKEANERMERTNTKHMGVF RFWRRTKSAELASVIMEDTLALIGLAFAGLGIGLAILLDDEIFDALGGLMVGLVLIVGSL FLAFKSGSLLIGEAVDSDTRGKIVEAVTTTPGVERLLNMQTVHMSEDDILLCVKVQTSKL DRDYDVETVDKIEKAVRTALPWYNFEIYVEPDIYSAKHVHA >gi|148337404|gb|DS264455.1| GENE 13 9733 - 11334 181 533 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 327 518 2 216 245 74 27 5e-12 MAIEAQGLEIQIGARTLLHPTNFHVAKGDKIGLVGRNGAGKTTLTRVITGDMLPTAGKVR VSGKLGYLPQDTHAADPEQTALDRMMSARDIASIIKRIRKAEKEMTDPDPDVMTKAMNRY DKAMQDFEKAGGYAAQSEATAMAASLGLPQEVMGQQLGTLSGGQRRRIELARILFSDADT LILDEPTNHLDADSIEWLRGYLKKYEGGFLVISHSTELLDEVVNKVWHLDAQLGQIDMYS LGWKAYLHQRVVDEERRRREREVAEKKAERLMQQGIRLHAKATKAVAAQNMMRRAEKLLE NTSEAQKKEKVADIRFPEPAPCGRTPIMAKDISKAYGSNIVFAGVNLAIDKGSRVVILGY NGAGKTTTLRLLAHLEDPDTGSVEYGHGCKIGYFAQEHDTLDLDATVLQNLIHVAPELDD TQARSILGSFLFSGDDALKPARVLSGGEKTRLALATLVTSRANVLLLDEPTNNLDPASRD EILKAIAKYEGAIVLVTHDEGAVEALNPERVLLMPDGDEDLWNDSYLDLVAEE >gi|148337404|gb|DS264455.1| GENE 14 11417 - 12133 681 238 aa, chain - ## HITS:1 COG:MA0995 KEGG:ns NR:ns ## COG: MA0995 COG3910 # Protein_GI_number: 20089872 # Func_class: R General function prediction only # Function: Predicted ATPase # Organism: Methanosarcina acetivorans str.C2A # 20 234 27 250 251 185 44.0 5e-47 MDDLIVSGLRIDWNMLTDSYVSRIPSLRSIDELEFHKNVTFLVGENGSGKSTLLEGIAVA CGFNAEGGTRNYRFSTYDDTSDLAKAMTIYRQYAIGPSSFFLRAESFFTLATQAREYSRG YGDMSRLHEMSHGEGFLEILLSHTGKGLYLMDEPESALSTQRQLTLLEHMYRMANDGSQF IIATHSPILLGLPDAEILSFDENGVHPCDYEDTDSYQITRVFINHRESLLRHLLGNET >gi|148337404|gb|DS264455.1| GENE 15 12377 - 12982 698 201 aa, chain + ## HITS:1 COG:Cgl2436 KEGG:ns NR:ns ## COG: Cgl2436 COG1335 # Protein_GI_number: 19553686 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Corynebacterium glutamicum # 1 200 1 185 186 159 42.0 4e-39 MAKALIVVDVQPTFCEGGELGVQGGNAVAERIADYVNARRSEYAYIATTQDWHIEPGTHW SEHPDFVDTWPVHGKAGTANAELHPAIAALNIEHHFKKGQYSPSYSGFEGFEDNTDRIPT REEVSTAMAAGRTLANGLKTAGITRVDVVGLAESHCVKETALDAKKLGFEVHVIENLTEP VNEELGIAARRQMSEAGIILD >gi|148337404|gb|DS264455.1| GENE 16 13267 - 13755 223 162 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487284|ref|ZP_02028691.1| ## NR: gi|154487284|ref|ZP_02028691.1| hypothetical protein BIFADO_01128 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01128 [Bifidobacterium adolescentis L2-32] # 1 162 1 162 162 272 100.0 5e-72 MRTTKSKKPITVVSVCVAAVACAVGAYRFVYLPLRPADVSHARISINATGKFDESQIDGA VKADLAKLKSWNGCRVDAVRYDAKRSATLLAAERDVTASGGSSSISTAIDEYGMDNVIYL SNDISCRAGSQNSSQDGWGSWYAWNPGSARAEHGWIFIDEGY >gi|148337404|gb|DS264455.1| GENE 17 14658 - 15668 1222 336 aa, chain + ## HITS:1 COG:L188881 KEGG:ns NR:ns ## COG: L188881 COG4767 # Protein_GI_number: 15673730 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Lactococcus lactis # 1 214 1 224 354 86 30.0 7e-17 MSYVLYFSKPFALAIAIWPFLSLLLTLPVLALLYHRDNRLRFTSALTAYLVVLYLIALAC FTMYPMPENPATYCAAHHLRPQLNPFEFIHDIRTDGITGVMQLAMNVVFFLPLGYFMKRV FRWKFATALPAMFLTSLLIETTQLTGIWGIYPCAYRLFDVDDLITNTLGGILGYAMGSIV THFLPQQRIDEDAITTEPGFVRRCVALAIDLFLVETASLSVTALIYLVGVLFDVNRANNV NAAVSAVATIVMFVLFEGIIPWRRAGRTLGGGFTRMTVETRERSGMRRIVFYTLRALVLY CAVYGLWTDRGFYALLLGIALIVFWRVKKRMPYDYV >gi|148337404|gb|DS264455.1| GENE 18 15957 - 16322 536 121 aa, chain - ## HITS:1 COG:MTH1452 KEGG:ns NR:ns ## COG: MTH1452 COG1917 # Protein_GI_number: 15679449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanothermobacter thermautotrophicus # 19 112 4 97 99 74 41.0 4e-14 MSDERNEAEPIELGYIEDLGDMISVQEGSTVSRTVMQKAGGNVVLFSFDTGEELSEHTAA MPVFVQTLKGRLKVTGNGRTVELVPGGLAYFPTRIPHAIYAEEPSVMMLTMVTPARDNIG D >gi|148337404|gb|DS264455.1| GENE 19 16371 - 16652 115 93 aa, chain - ## HITS:1 COG:no KEGG:BAD_0846 NR:ns ## KEGG: BAD_0846 # Name: not_defined # Def: protein TrkB involved in potassium or sodium transport # Organism: B.adolescentis # Pathway: not_defined # 1 78 5 82 82 123 98.0 2e-27 MLIAMSWAAYSSTSSLSRSVQEWLAESSGTKVVSMSMFSFISLIPPFVPLTPGDIADFHG TGKSLDHKRVRCKSVFTSWSNVFPPRVHAVSPA >gi|148337404|gb|DS264455.1| GENE 20 16531 - 16656 182 41 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487291|ref|ZP_02028698.1| ## NR: gi|154487291|ref|ZP_02028698.1| hypothetical protein BIFADO_01136 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01136 [Bifidobacterium adolescentis L2-32] # 1 41 15 55 55 69 100.0 1e-10 MNENIDIDTTFVPDDSASHSWTERDSELVEEYAAQLMAMSI >gi|148337404|gb|DS264455.1| GENE 21 16823 - 17218 509 131 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_841 NR:ns ## KEGG: BBMN68_841 # Name: not_defined # Def: membrane protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 7 131 35 159 159 131 52.0 7e-30 MPTDGKPKNGIVRQLFSYGGVSAMQTFVEFGVFAVLQLAGLPFRLANAVAVFCSGSFNYV MNRNVTFKSSSNYTRSIAMFVAMYCWNLLFSNLMMAWIPGLLGWPTMVVKIVTMGMQAVW GFLLCRYVIFK >gi|148337404|gb|DS264455.1| GENE 22 17347 - 18843 1663 498 aa, chain + ## HITS:1 COG:no KEGG:BAD_0844 NR:ns ## KEGG: BAD_0844 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 498 1 498 498 903 99.0 0 MERLRPVYETGVLRLLLRGNSMLYVALLRSTFDPLTGELPREIVEERFSRSLTRLAETGD YTPKEGQTSAEAAHTILQQLTKEGEGDYAWLANSLDVAAHRYLYRLTARAHRAIEALDRL EDTTKALSGAQANSIIMEIEHARMQLTADPRERIRLLERDIEERQKQIDELKHSDTLDKL TSQQVGDIIGVIHNTLRGVPIDLRELALEERDNGDNLRRSMQSGSISVEQALGTYHDEYH RSFHESDSGRRFEDAFQVIVTDEGRREIDEAVRDIAQNPYLEGEPGILLAQVRAELKRIY EGIEDVRRQIRISDEAVSRLVRQQTDTHYRTMLDKLHRLFVRASDDAKTHPGSDERPYRT DTGTAQFQALPSRPAKSMARAATAGLDDAPSTNVDAPDLKAMVEMCGPRLTHMIGLIRRD PVKTADGRFVDFAASFNRLPREERRESELIGFLSALRTQDGPATVAWHCVSIDGGERVWR TRPILTTEAALDEIIEEG >gi|148337404|gb|DS264455.1| GENE 23 18846 - 19685 962 279 aa, chain + ## HITS:1 COG:no KEGG:BAD_0843 NR:ns ## KEGG: BAD_0843 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 279 1 279 279 459 99.0 1e-128 MTDNTDGFDTGIGIEEETGPESGMPSEGPDMTRDRPALFDGDTGDMPLEARMAAIALKRE RYIGGSLYDRACQYREAVERSLNNDMLRLVDNTKYRIMYASPVTDAETNIRSLKTRVSLT REEAATLAALRIKVLEYENQKTKPGDWLISFDDIRALLATGAGFLTASNDEEGTAKKITS VISRMRTYGYLAETGDENMYVLTPLVPMVLDQKLADRWLGSDDTDGDGMKDADGDGYDDS SIGADGGDTSDSTGTVSSGVEQDAFDFDSADDAFDGGEH >gi|148337404|gb|DS264455.1| GENE 24 19685 - 23143 3695 1152 aa, chain + ## HITS:1 COG:Cgl2744 KEGG:ns NR:ns ## COG: Cgl2744 COG4913 # Protein_GI_number: 19553994 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 11 1097 14 1071 1111 102 21.0 5e-21 MEDGMKIVSDRWMLQSRQIVNWGSYGGYHVFRPSMDDAMPVTLLAGASESGKSTLVDAQI SLLYPSGTPYNKASNSGRSERNDYTYLRGMIGISDGENGETPIFLRGRDADGTPQNIWGA IVDTYANRSDGGLLSCAKFLYLTAGDGPDGLRRQYVTWNQTIDPRLMDRHRDTSFTRGLM EQTYPGCTTHVNAQAFHASIWQDMGLSAEACRLLHKIQSADAPSKLDDIFKQGVLDVPES IRLARETVDDYNRFSENFHSMEDKMERVAILQDIQARYGEYAKQASERREYTPIDPDREQ GETTLAAWTWSRMASEVRAGLPSAQRKAKESQDAIDRSQQRIDELDTQIEAVKERMNGID GGSLQQLGKDFERARQDADEARRQRHAIAERFERVEGRLPADEQTWNAKRAALALSLDTY DKRLEDARSEYQRMVVERHARQGERDLLRQDYRRKIEHRTRISDDMDHARTLIARATGLD ETELSYVAELMDVDEGDEQWRLAMDVTYAPIAQTILVDKRHEQGFAAKVSAIDPTRMTRR AWRFVDTDAQYDSACNEGWMSSKLRYKEDSPFVGWLKEQTASQRFDARCVEAIDDMDRAE RQVQVDGQIKSGDRGFHGVKGLRQVIGFVNERYLAELERQLDGAERALEDADRRGRQMAN AMTLLQDEHELALTVADLPWGKIDVDGLETKAERIRLQIERIESDPELAQLQDELKQLLR QKDDEGKTRYRAEAELENAQHAVQTEQAWLDMHGDSDFDDAALPDMVSNLLADTYETCFD TSRPQERPQRIAGGFDREGTAPFDVRVLRRIGNTVRARLQQIDERAVQLRADTERAMGDY LKHHSTEGDTVMASVEDYPYFLDELKNLNMLVTRAATDEEYANSVEKLYMSFQQLNRAFN TDEENVREQLDRINGMLKGQQFGPRGGRLSLHVDFHPIDRQFKSSLGRIMSKLDDWTRNA RSNPMETRKAFAGCETFIGRLQAELGQIRDTNGIKEYGARNLDPRVRSSFYAIVHHNDLP DERISSTGGKSGGALQELTSFVYGAALIYLLGGDLTGKPTYTTLFLDEALIKADGRYTKR ALTVLPRLGFQIIVSAPESKTAEILSIADKAYVAYKDPATGNSYLQELDREPATQAETQD ATVEQTQPATEA >gi|148337404|gb|DS264455.1| GENE 25 23145 - 24377 1199 410 aa, chain + ## HITS:1 COG:XF2735 KEGG:ns NR:ns ## COG: XF2735 COG4924 # Protein_GI_number: 15839324 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 35 381 34 381 401 84 25.0 4e-16 MAAARNTTGETDIRRKLDEYVDAHLTRHMYDTDESWPLRKTIRLPKQAELEQHYNQIRAQ NETIRDWARQHHCETSEKTKIVSSGLIQQKSPLIDSVTIPDLDTALRIATKQTRERYLRE HDRMSALAKEFGLEPANAMNVAKTLKDHDDTDFHLVIQAAHYFANHDCHTMTPRMAPIPG FSAKWLGTPNSQRRKAIRQLTRQDNLTFQERPNELRLRLMDAEHHDQPDLIVTQPWVRNQ PTDIEHAIIIENKDTYQAMPTVEHAICILGNGYAATSHITTLLPWLTTIPNIIYWGDMDA NGLDILSKLRATGIPCTSILMDTTAYRTYEQYGTQLDAKNKPLTTQTPQPTPGLTTEERK LYETLCTGTDIQYLRIEQERIPIRDATTILHDQHHWPIDIPGNDIPNNTK >gi|148337404|gb|DS264455.1| GENE 26 24453 - 27440 3508 995 aa, chain + ## HITS:1 COG:MT1675 KEGG:ns NR:ns ## COG: MT1675 COG0178 # Protein_GI_number: 15841093 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 53 995 12 961 980 1318 68.0 0 MTTKRNNTTHNEVVVERVLTSDAFLTREIKKAPMKTTGDSLIADLTHLPNDLKITIQGAR EHNLKNVDLEFPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMDK PDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGIPHCPECGALVSAQ TPQQMVDTLLKYPERTRFQILAPVVRGRKGEFEDLLELLRGDGYARALIDGEMRQLSDDI KLAKQKKHTIEVVVDRLVVKDGIRQRLTDSIETALKLSKGVVVADFVDLDEKDPDRRKPF SEKRACPNGHQLELDEIEPRTFSFNAPYGACPECTGIGYKLEIDPELVIPDPDKTLNENA IEPWGMTKGTGEYYRHVLEGLGDEMGFDLDTPWKDLPKDARDAIMYGRDFKVQVSYRNRW GRMREYSTGFEGVVRTLMRRHDETDSDQMKQYYESYMREVPCQACHGRRLRPEVLAVTVG DESIADVCDMSAERSLAWINGLELEGSAAQIAGEVVKEIRARLGFLNDVGLNYLTLSRAA KTLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNERLIGTLHHLRDLGNTLIVV EHDEDTIRNADWVIDIGPGAGEHGGEVVYSGPARKITEAPRSITGDYIAGRRKIEVPAAR RKTHKTKQLRVVGARENNLKNLNVNFPLGVFTCVTGVSGSGKSTLVNQILYPVLADKLNG ARIVPGKHTRVEGVDQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVRG YGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVDCEECHGQRYNRETLEVKYNGKSV ADVLNMPIEEAAQFFKAYPSISRYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLATELQ RRSTGKTVYILDEPTTGLHFEDVRKLLLVLQGLVDKGNTVIVIEHNLDVVKSADWIIDLG PEGGDGGGTIVTEGTPEQVAQCEQSWTGKFLRDML >gi|148337404|gb|DS264455.1| GENE 27 27437 - 29779 2303 780 aa, chain + ## HITS:1 COG:Cgl1554 KEGG:ns NR:ns ## COG: Cgl1554 COG0322 # Protein_GI_number: 19552804 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Corynebacterium glutamicum # 51 754 7 695 696 583 45.0 1e-166 MTDFERHSPDVWRKTADALRETAVSDAGTQSDGRGVNKNGAPLLGDTRDLFRPKTSDIPA QPGVYKWRDGEGRVIYVGKAKNLRNRLTNYFQPLYQLHPRTQTMVLTARSLEWTVVGTEL ESLTLEYTWIKEFDPRFNVVFRDDKTYPYLAISSGERIPRVWVTRSRKRRDTRYFGPYAK VWDLRHSLDALLKTFPVRTCSKSVFHKAQLTGRPCLLASIGKCSAPCVNRIGADEHRRMC EQLVGVMTGRIGKSYIAQLTRDMKQASAELEFEKAARLRDQIQMLGTVVQQNAVVFDSDV DADVFGIASDELEASVHAFFVRSGSIRGERNWSVERVEDVSDAELIADLITQVYSETTGE SAAVSDSTVVTERRNAIGSTQTVTATDAIARAQATKERNERQEQTGRADLLAPIAPVPRE VIVPIEPSRSAGLEQWLSGLRGAAVTIRVASRGDKKQLMDRANDNAKQALARSKMSRISD MGARSDAMNDVAKALGLEQAPLRIECYDISNTVGGAFQVASMVVFEDAIAKKSEYRRFAI RGADGQGALDDLSALYETLTRRFRHGNIAGDSGESMDNERRMATQNDRSDGTNGPETDAV QQNTNRRHFAYKPNLVVVDGGKPQVMAAAKALADCGVDDVAVCGLAKRLEEVWVPDDDYP IILKRQSEGMYLLQRVRDESHRFAITYHRQTRRKGALRSALDDIPGIGEAYQKRLLNHFG SVRAMREASVEDFEQVKGIGHAKAENIYQALHSSVDIAPKAEDALRTVKSDGNSPKDEKK >gi|148337404|gb|DS264455.1| GENE 28 29845 - 30783 826 312 aa, chain + ## HITS:1 COG:Cgl1591 KEGG:ns NR:ns ## COG: Cgl1591 COG0169 # Protein_GI_number: 19552841 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Corynebacterium glutamicum # 2 312 3 270 276 120 33.0 3e-27 MTEVDHRCAVLGKPIAHSLSPVLHNAAYRALGLDSWSYGRHEIGETELEDFLESLDSSWA GLSLTMPLKKTIQPYGVPCNAWAKELKVANTAVFDWSGANDKNAAIPAIRLYNTDVKGIE LAFEHSYRARGMRMDSGQDGEAVIIGNGNTATSALAACTEMPHIGHVTVVARHPDKNEAL EPLAESHMGVGSISIVAMDHAANLLSHADVVINTIPGLAADPIAEAFASAGIVTNGTLLD VVYDPRPTKLMQAWRSCGGTAIGGEEMLLYQAMIQVWLMTGIWDNDPPTEPTSHQKVEAL EHAMRSALKEAL >gi|148337404|gb|DS264455.1| GENE 29 30783 - 31715 1042 310 aa, chain + ## HITS:1 COG:MT1464 KEGG:ns NR:ns ## COG: MT1464 COG1660 # Protein_GI_number: 15840878 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Mycobacterium tuberculosis CDC1551 # 19 306 12 300 301 283 48.0 4e-76 MNEKNNAVNQAGRHTSAPSPAAGFEVLLITGMSGAGRSHAANSIEDMGWYVVDNMPPKLL VPLVDMMTSSGSNIHKLAAVIDVRSRDYFDDLSAVLSHLDDLGVKTRILFLDASNEVLIK RYESVRRPHPLQQGNRLIDGILEERDLLKNLKEHADIVIDTSALSIHQLSTKLYEGLLGS GPTTVSVHIFSFGFKYGIPIDADFVADVRFLPNPFWVPELRSLTGKDKPVSDYVLSSEGA EEFLDAYEKAIAIAIEGYAQEDKHYVTIAFGCTGGQHRSVAMSEALAKRLRARGLTVSVS ARELDKRSAD >gi|148337404|gb|DS264455.1| GENE 30 31870 - 32820 956 316 aa, chain + ## HITS:1 COG:Cgl1551 KEGG:ns NR:ns ## COG: Cgl1551 COG1481 # Protein_GI_number: 19552801 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 307 1 305 327 235 47.0 7e-62 MALLDDVKSELAAIDNELPIAKKAQATAMIRFGNGLHSVDHHILVQAQLDSQDAAIWLQD TIRNLYGHEATLTPVSRQTPTGVVQRFIVRVPKGSAALVLQTGLYSRYTKNMVLGLPGDI INGKIAQIKAAWRGAFLAGGHLSDPGKASYLEIVCPNHEAALALVSTARRLGITAKPRKL RSSERVTLRDPDAIERMLILMGAPHSAREWTGKRSDGEARGKANRLANFDDANMRRSAKA AAEACDKVRQAFEILGDDVPDNLKSAGQLRLDHADASLEQLGRLADPPITKDAIAGRIRR LLQLAEKTEKARRQAA >gi|148337404|gb|DS264455.1| GENE 31 32952 - 34157 1783 401 aa, chain + ## HITS:1 COG:TM0689_1 KEGG:ns NR:ns ## COG: TM0689_1 COG0126 # Protein_GI_number: 15643452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Thermotoga maritima # 3 397 5 391 399 397 56.0 1e-110 MKTLKDLGDLKGKRVLVRADFNVPLDGTTITDDGRIKAALPTIKALREQGAKVILMAHLG RPKGKVVPELSLAPVAARLGELLGITVPLAADTYGEDAQAKVAAMSDGDVVLLQNVRFNP EETSKDPEERAAYAKKIAALGEVFVSDGFGVVHRAQGSNYDVAADLPAAAGLLVEKEVKA LSRATVNPERPLTVVLGGSKVSDKLGVIDNLLDKANRLVIGGGMAYTFLKAKGYEVGTSL LEEDQIETVKGYMERAEKNGVELVLPTDVVINPVFPKSDEDIAPEVVAADAIPADKMGLD IGPESQKLFHDKIVDSKTVVWNGPMGVFEVPTFAEGTKAVAQALVDATAAGAFTIVGGGD SASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVLD >gi|148337404|gb|DS264455.1| GENE 32 34283 - 35077 732 264 aa, chain + ## HITS:1 COG:MT1482 KEGG:ns NR:ns ## COG: MT1482 COG0149 # Protein_GI_number: 15840896 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 5 247 3 243 261 226 46.0 3e-59 MGPKRIPLVAGNWKMNFDHLEATYFVQQLAWNLRAVHFDYKRCEIALMPSFTSLRSVQVA VESDNLKIRYGAQAVSVTSQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDANIVD QVRAVLAAGMQPILCVGESYEERRKGIELDFAVGQVHDVTRDLSDEEAAKLIVAYEPVWA IGTGMVATPQSAQDAARAIRNDLSDTFGTRVGETVRILYGGSVSSKNAVELINEPDVDGF LIGGSALKVDELTRICKLTLETTA >gi|148337404|gb|DS264455.1| GENE 33 35122 - 35424 362 100 aa, chain + ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 17 97 36 116 117 59 43.0 2e-09 MRYYQKQCLRTGGSPVSAMATVKLVLQILLVILSLLLTLLILMHKGKGGGLSDMFGGGLT QNAGSSGVAEKNLNRWTVIIALLWVAIIIALGLMTKFNLI >gi|148337404|gb|DS264455.1| GENE 34 35512 - 36360 897 282 aa, chain + ## HITS:1 COG:Cgl2829 KEGG:ns NR:ns ## COG: Cgl2829 COG0561 # Protein_GI_number: 19554079 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 13 278 10 275 278 73 26.0 4e-13 MTSTNNTYDDVTMVVADLDGTLLHDGKTFEDRFLTQRSIDSINRMHDAGIKFVVETARPV STGYSFVQKLPVDAVAYLNGALLDFNPVSSDYDMLTSPTLPKDGHLQKIGFSSKRACEVC KYLLEELPGMEVGIVMDDVRYTNFDVTKYWKTQTWRYTDFDDVPDGTADKLILFPNEEQW KRVGRLIPDDFDVHISEGSLWMLMNPQANKEHALSILADRMSTPLSRTVSFGDDLVDIAM LRESGRGVAVANANPDVLKIADEICPSNNDDGVAQWVENNLL >gi|148337404|gb|DS264455.1| GENE 35 36515 - 38047 1536 510 aa, chain + ## HITS:1 COG:L162604 KEGG:ns NR:ns ## COG: L162604 COG0436 # Protein_GI_number: 15672142 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Lactococcus lactis # 106 507 1 402 404 583 68.0 1e-166 MTESFSTRLNDAMALRELKQIDFVHAAEKFNIKLGKSHMSQYVSGKTVPRADIAHFLAAY LRVNEDWLMGKDVPMEEHAAILPDFAGEQPDHVDDASEQPTEGRTMRTFTKSHKLDNVLY DVRGPVADEAARMEAAGTHILKLNIGNPAPFGFRTPDEVVYDMSQQLPDTEGYSPSKGLF SARKAIMQYAQLKNIPNVSIDDIYTGNGVSELINLSLSALLDNGDEVLVPSPDYPLWTAC VNLAGGTAVHYVCDEDSEWYPDIDDMRSKITDKTKAIVIINPNNPTGALYPKEVLQQIVD LAREHQLMIFSDEIYDRLVMDGLEHISIASLAPDLFCVTFSGLSKSHMIAGWRVGWMVLS GNKRLAKDYIEGLNMLANMRMCSNVPAQSVVQTALGGHQSVKDYLVPGGRIYDQRELVYN MLNDIPGITAVKPKAAFYIFPKIDVKKFNIHSDEQFALDLLHDKHILISHGGAFNWQEPD HFRVVYLPRISMLKETIGEIGDFFSTYWQA >gi|148337404|gb|DS264455.1| GENE 36 38218 - 39321 1612 367 aa, chain - ## HITS:1 COG:Rv1448c KEGG:ns NR:ns ## COG: Rv1448c COG0176 # Protein_GI_number: 15608586 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Mycobacterium tuberculosis H37Rv # 9 363 12 369 373 365 56.0 1e-101 MTEATQRTSDSGVSIWLDDLSRSRIESGSLQDLIANKNVVGVTTNPSIFQKALHEVGPYD PQLKELGKVDVETAVRELTTTDVRNATDIFREVAEKSDFVDGRVSIEVDPRLAHETEATE KQAEELWAKVNRPNAMIKIPATLEGLPAITATLAKGISVNVTLIFSLERYEQVIDAYIEG IAQADANGHDLKHIGSVASFFVSRVDTAVDKLLEANGSDEAKALEGKAAVANARLAYELF ENKFANDPRWAALEAKGAKKQRPLWASTGTKNAAYSDCKYVDELVAPFVVNTMPEKTLNA LADHGNGAPSIKGTYEKSHAIMNKLADLGINIKDVTDKLEADGVAAFIKSWDTVLADVQA GIDRVNG >gi|148337404|gb|DS264455.1| GENE 37 39411 - 41519 2904 702 aa, chain - ## HITS:1 COG:Cgl1536 KEGG:ns NR:ns ## COG: Cgl1536 COG0021 # Protein_GI_number: 19552786 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Corynebacterium glutamicum # 7 695 23 698 700 697 54.0 0 MTEFKETELDERAIKMAKVLSADAVERAGHGHPGSPVSLAPIAYTLYQHFIKHDPNDPNW EGRDRFILSGGHASLTQYVQLYFSGYGLTLDDLKNFRGGADTRTPGHPEYGLTPGIEMTT GPLGQGFASAIGFAYGQRFQRGLLDPEAPEGESPFDHNIWVICGEGDIEEGISGEAASLA ANQQLGNLTVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDVEG LADTIAKARAAAPNQPKLIKVDTLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPE ESFHVDEEALAHARKVAERGLEAHKEWDEKYNAWRKANPDKAALYDRIKAGELPEGFDKA IDDLEATFEVGKNVATRGASGSTLNAIAAVMPELWGGSADLGGSNKTDLKGAETFAPAEC ATKQWPNCSKYGRQLHFGVREFTMGTITNGILLGSHTRPYGGTFFMFSDYERSAVRLAAL MQIPNLYVWSHDSVAVGEDGPTHQPVEHLASFRAIPQLEVARPADAYETAEAYRYFFEKK NTLPTAMVLTRQGVPVLAETAEKAKDGVKKGAYVLVDTEGTPDVIIMATGSEVQWAVSAA KTLAGEGIKARVVSVPCVEWFEEQDAEYKEAVLPAAVKARVSVEAGVAMPWYKYLGSYGK PVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEVEAAK >gi|148337404|gb|DS264455.1| GENE 38 41894 - 43021 1085 375 aa, chain + ## HITS:1 COG:ML0624 KEGG:ns NR:ns ## COG: ML0624 COG1420 # Protein_GI_number: 15827254 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium leprae # 2 367 4 341 343 222 41.0 8e-58 MAQSRRMLVLRAVVEDYIRSQEPVGSTTLTRDHDLGVSSATVRNDMAALEDEGYLIQPHT SAGRVPTEKGYRYFVDRLATVVPLSEAQRRGINSFLSGSVNLQDTLQRAARLLAQITGQV AVVAAPSLSKSTLRHIEIVPVSINTLLAVVITDTGRVAQHILNVTKLPDVTTLTHLTNEI NTQCSGVSLTRTADCVRQMGARKEYHAISTLAETLAQAFDGMADDERASELYMAGTSRLA HQRTVADLAPLFDALEEQVVLMKLMSSLSETTQSDGVGVAIGSETHTPGLLHASVVTSGY GRTSAAATDGATHAAASSQTENQSGDDTQQAGEPVAFVGSIGPTHMDYAATMAAVRAVAR YLTAFLAHDEGQPAD >gi|148337404|gb|DS264455.1| GENE 39 43074 - 44225 1320 383 aa, chain + ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 3 382 4 375 378 277 43.0 3e-74 MTDYYEVLGVDRSASDDEIKKAYRKMSRKYHPDIAGPEFEDKFKEVNNAYDVLSDPKKRQ MYDAGVDPNDPNAGGMHGGGFGGGFGDMGDIFSMFTGGGFGGTGGGPTPRTQPGRDALVS ATIDLKTAVFGDTTHVKVNTFGLCQECGGTGCQNGTQPTQCPDCHGQGYAQRVVRTMLGQ MMTTAPCERCEGHGTVIEKPCPSCLGHGRVRVTRNVGVAVPAGVANNTRLRLANQGEVGE NGGIAGDLYVDIRIKPDDMFTRDDDDLHCWIKVPMSWAVLGHEVEIDTFDGRQTLDIPAG SQPDDTVTLKNLGVTHLDDKNERGDLVAHVVVEIPKKLSDDERELIERFGEMHDTDAQHV VVKSRPSSGAKKGFFSKLKDALR >gi|148337404|gb|DS264455.1| GENE 40 44333 - 45154 865 273 aa, chain - ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 29 273 17 246 249 143 37.0 3e-34 MSGMGERLIGMGKYRKSRAFSPEGFFECEGRGLKWLGEAQSQGGPRVVDVYDWGKDYLDI ERVNACGPTIQAARDFGVALAHMHDAGAEHFGSAPTGYDGTCYFGPLQDPVPMDTGAWDD VATYLADGRLRPMVRLGMKRRELTDYDMELTEAVIDALPDILGKAANDKPARVHGDLWSG NVMWTADSGDVEAVLIDPAAHGGHREEDLAMLDLFGMSYLTDILEGYQSAHPLKAGWQDR ITLWQLYPIAGHCVFFGGGYVSQYRAMCRSLLK >gi|148337404|gb|DS264455.1| GENE 41 45293 - 46177 1324 294 aa, chain + ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 285 3 274 278 243 49.0 4e-64 MNFFQAIFLGLVQALTEYLPVSSSAHIRIIGDLMLGSDPGAAFTAIIQIGTELAVILYFR HDIIRILGAWFGSLFGKEGKDFKSRMGAHNRDTQMGWFIIIGTLPILIAGLLFKDAIEST LRNLWITVTVLIIFGILLWVVDARAKQVKTMDEMTWKDALIFGIGQMLALIPGVSRSGGT ITFGRAMGYTREAAVRVSFLMAIPAVFGAGILEAVSAVKDVAAGNAGMFPGWGATIAATI VAFVVGYVVIIGFLKFVSTFSYKAFAIYRIALAVVVALLLICGVLHPTEVVAAA >gi|148337404|gb|DS264455.1| GENE 42 46269 - 47078 884 269 aa, chain - ## HITS:1 COG:no KEGG:BAD_0824 NR:ns ## KEGG: BAD_0824 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 269 7 275 275 557 99.0 1e-157 MPKTILIAAFEGWNDASQAATNVVRHLVSRYESQEVRHIDNEGFYDYQVARPMICSVQGR KRIIWPQTTFYDIAVSPMLHLLAQIAPEPNYRWEEYCRQTLRVAEDYDVSDVITLGSMFD ECPHTRPLPLDISKSGCECESDREYNGPVGIPNILDAFAAEAGFPTTSIWVSVPHYCANT ECMQGTLELLRALSLIIEYPLIEGDLTRKAMQWRSDADGLVSDMHAGDYLARLEHDYDLD ARAKRIASNGMPACEELLREAESLLRNGV >gi|148337404|gb|DS264455.1| GENE 43 47914 - 48045 263 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNKNKIFSAIMRGFEVSGINALSSAAGSSSVNGALQEIIDTRR >gi|148337404|gb|DS264455.1| GENE 44 48113 - 48337 214 74 aa, chain + ## HITS:1 COG:no KEGG:BDP_1154 NR:ns ## KEGG: BDP_1154 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 17 71 5 59 62 89 85.0 6e-17 MFPGKRLQLPIVNERQLNLNQPVKDMGPNELKAYAELGQKQHDEANRELERRWRSYDDML PKDEFVSIIDKNER >gi|148337404|gb|DS264455.1| GENE 45 48410 - 48856 584 148 aa, chain + ## HITS:1 COG:MT1875 KEGG:ns NR:ns ## COG: MT1875 COG1716 # Protein_GI_number: 15841297 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 35 142 41 148 162 110 54.0 1e-24 MTAMTDPIPSAGETTIIGLPAITVPVTSTGDRPLTKEDLNTIMRLADGTALLISTRGAVS GSRYLLDEDEITVGRDPSSDILLDDSTVSRTHAVFRRINGNYSVIDAGSLNGTYVNRQRV DSQELKNGDEIILGKFRLVYFTNKAVIA >gi|148337404|gb|DS264455.1| GENE 46 48966 - 49586 407 206 aa, chain + ## HITS:1 COG:MT1879 KEGG:ns NR:ns ## COG: MT1879 COG0789 # Protein_GI_number: 15841300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 16 203 45 220 225 145 44.0 7e-35 MDGEAEPTMRLHLHVSHAVQGELFPSADAQPVTRGYRGTVASKVAGITYRQLDYWARKQI VEPSITPSHGSGSRRLYSFKDVVILAVSKRLLDAGINLQNVTTAIGFLAQRTPEQLAGIT IMCDGQNVHECTDSEQMVALLQSGRAVFGVSVGSLWHQIKEALEHEEYVDLTKTPASTDT NRPIDDIAAIRMRKKLESRRKSRAAA >gi|148337404|gb|DS264455.1| GENE 47 49652 - 50017 328 121 aa, chain + ## HITS:1 COG:no KEGG:BDP_1157 NR:ns ## KEGG: BDP_1157 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 118 1 118 127 181 75.0 9e-45 MLDILPALLWIIAAVIAVNICSITAIRGNLFSKKHRDVHPVRWSIIALHFTSLVIGALPY PVYAMFRSDFSAKFRRFYEHVGWPSAAVMVMLIAAELVFMYLQARNGMHSEMERKLNQAV K >gi|148337404|gb|DS264455.1| GENE 48 50199 - 50912 913 237 aa, chain - ## HITS:1 COG:all2681 KEGG:ns NR:ns ## COG: all2681 COG0546 # Protein_GI_number: 17230173 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Nostoc sp. PCC 7120 # 8 230 5 212 215 129 35.0 5e-30 MSEHPKKVVLLDLDGTLTKSDPGIIGCVVKAFEEMGYPVPDDAELHRFIGPAISESMQRN GIPDDKLDEGVRIYRKYYADEAVFDDPNNPGQKVPGRLNNTIYQGIPEQLAKLRADGYYL AIASCKPQYQCIPICEHFHLDTMVDGIYGASEDNSRLDKDQVIRWAFQHIDFDENAGDKA LMVGDRWTDADGAKACGLDCLGCGWGYAEPGELKAHGAYRILDSVDELAQAVEEYFA >gi|148337404|gb|DS264455.1| GENE 49 51018 - 51365 304 115 aa, chain - ## HITS:1 COG:no KEGG:BAD_0819 NR:ns ## KEGG: BAD_0819 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 115 1 115 115 216 100.0 2e-55 MAERSLRGMSIGAKSLESDDNVDFAARTDVAYVCPKGHRTILPFAEGAEFPDEWECRCGA VAHREGDNDDEADEIAKPTRTHWDMLMERRTEDELKALLEKRLQMHRDGWFPDYE >gi|148337404|gb|DS264455.1| GENE 50 51474 - 54077 2381 867 aa, chain - ## HITS:1 COG:MT2153 KEGG:ns NR:ns ## COG: MT2153 COG4581 # Protein_GI_number: 15841583 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Mycobacterium tuberculosis CDC1551 # 45 609 9 553 906 495 49.0 1e-139 MTHHRRHGNNDTGTYDAEMTTALSPAQRYAAFKQTQAKRQSVSSRFARSMPFELDDFQVK ANDALEAGDNVLVAAPTGAGKTVVADFAIYLAQERNVKAFYTTPIKALSNQKYHDLVETY GPDRVGLLTGDTSINSEADIVVMTTEVLRNMLYEHSMTLDALRYVILDEVHYLADRFRGP VWEEVIIHLPQSVRIIGLSATVSNVEDFSKWIESVRGDTTLVVSEKRPVPLEQHVLVQAD DHTEPELIDLYRRDKDGNQTDKLNAQLVSRLDQLDRKAAKRRGEQRPDRRKGGKGGKWND HSRRPERHTPRRWAVIDELNFLGILPGIYFIFSRNGCDQAVEQCINAGLELTTDDEVRRI RRIVDEMVEGQLSQEDLKALHFSQFRFALEEGFAPHHAGMVALFRQIVERLFEEGLVKVV FATETLALGINMPARCVVVEKLEKFDGTGHVGLTPGEFTQLTGRAGRRGIDTIGHAVVVD HHGFIPATAAALSSKRVYPLHSSFKPTFNMAVNLLNSSDYETARITLDHSFAQWEANESA WQLEAQMDTLRKALDGYERAFDCEFGDFKEFMRLRMRLSDLEKNERRKLKHEVFRTQKAR SEAFKDLDRRIAELREKDRDHPCRKCPDIQKHLKWGHRWAREMRELERVQHRYDSRTGSV ARQFDRICNVLNELGYLDRLDEGAKEHIDYRLTERGQLLRHLYSELDLVLAQAIDDGAFD GLDATELASAVMSLIYEPRRGSGGEPRHYPGGMQGNVAVCAAQLKGVHASIAMLCEDYAL DEPRQLDFGITDVVYEWAQGESLSRVLYGTDLTGGDFVRGCKRLADVLQQIAVAGPYLGK RAETLAPIAKQAYENVNRGIVAYSGVD >gi|148337404|gb|DS264455.1| GENE 51 54092 - 54409 239 105 aa, chain - ## HITS:1 COG:no KEGG:BDP_1161 NR:ns ## KEGG: BDP_1161 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 105 1 105 105 139 61.0 5e-32 MPWWIWLVLVLFMLTMLVGGGAYACIRGYHAFKDAIKVGGRMSKRFEAMSEPLPQPKENT SPFFTRPLEDAANRYIDAHAEVISRREEKRVRHARQWAQWKHSND >gi|148337404|gb|DS264455.1| GENE 52 54423 - 56336 1691 637 aa, chain - ## HITS:1 COG:no KEGG:BAD_0817 NR:ns ## KEGG: BAD_0817 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 637 1 637 637 1210 99.0 0 MAEGSNGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKA AFAKQFQRDRAKLAAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRVRLLFGDEDLPI LAAANYLARSMSISSAPAHEPQHASRTAPRVPQTPIPGLGLDSIAPGLGTQSIPDELVKV VDQRRFAATVDVDGEHLNVAYADSDDLAMFVLSHPGASIVSPQEAVDAFNRRLHAATQFV PADESTGTDSSTVVSPEINRNSTDEDDTEEGKGRPKKNSAFQTGSEVDRRLRLMLFLSAH MGEEYSLEELAERFIGRPKSDDELKKFVNIIHKDINTLTTVSDDGEMAGSQFFDIDWSLL DAEGIVSATNSLGLERLAGISQQYLSMLTASVSYLAHSSLLPDKLREQAESLYSRLRQHV KPGDMPWLSLTGYEMEPRNFSIVKSAISKGMLLDMEYTDGAGRIQRKLVAPDKIFVDEGV YYVAVWTDVSNAAPADKMKFVKTDTTINKATGKPRIWQVLRISRIEHAELVEPTEKVDIP DVPASELRKWSFDNGTPAVFITNQDDLSFIDSLSGATVEKCGEGEKVHLIVSSDSWYVAF CIAHARHITAVAPETLRTMIIARAQHELSVGDRENED >gi|148337404|gb|DS264455.1| GENE 53 56479 - 57858 1493 459 aa, chain - ## HITS:1 COG:SPCC1322.04 KEGG:ns NR:ns ## COG: SPCC1322.04 COG4284 # Protein_GI_number: 19075632 # Func_class: G Carbohydrate transport and metabolism # Function: UDP-glucose pyrophosphorylase # Organism: Schizosaccharomyces pombe # 9 427 60 470 506 231 36.0 3e-60 MTDMAIAQFRRLYEVWRNEEASSWIREDEVEPLVSVPSFHDVYETINHDKAVDAFAKTAF LKLNGGLGTSMGLDCAKSLLPVRRHKARQMRFIDIIIGQVLTARTRLGVDLPLTLMNSFR TSKDTMKVLQTNKKFHQEDIPMEIIQHQEPKISAETGMPVSFPANPELEWCPPGHGDLFS TIWESGLLDALEAQGFKYLFISNSDNLGARPSRTLAQHFENTGAPFMIEVAKRTPADRKG GHIVRDKATGRLMLREMSQVHPDDKDDAQNIDKHPYFNTNSIWVRIDALKAKLASYDGVL PLPVIRNKKTVDPTDPTSEPVIQLETAMGAAVSLFDGATCVCVDRMRFLPVKTTDDLFIM RSDRFHLTDQYEMEDGNYIFPDVHLDARYYKNIHDFDARFPYGVPSLAAAKSVNIDGDWT FGRDVMLFSDARLEDQGEPSYVPNGEYVGPQGVEPDDWV >gi|148337404|gb|DS264455.1| GENE 54 58455 - 58868 263 137 aa, chain + ## HITS:1 COG:no KEGG:BDP_1164 NR:ns ## KEGG: BDP_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 5 137 8 141 141 157 67.0 1e-37 MQQNDTQPQFDDVDEFAHVFDSTLPEDEWKIRLPRELGLEARERARHDGITLTELTRRAL LSDDSDGCSDAVGIGRMPKNSDGRKQLGDEWKIKLPYAVGHKARAKAKQDGISLSSLARR AITGYLRTRNQDEHPLF >gi|148337404|gb|DS264455.1| GENE 55 58994 - 61123 2320 709 aa, chain - ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 243 709 4 461 463 470 56.0 1e-132 MIRVAIDGPAGVGKSSTSKALAKYYGFAYLDTGAMYRACAWWCMHKGIDLDAETIDEQLV TETVGEFFTDGHFDISVDPDDPKVYADDEDISEAIRSSEVSSHVSKVSNIIPVRHVLIAA QRAYIAREASVDSFSEGAGIVAEGRDITTVVAPDAEVRILLTAREEVRQARRSGQAVSGV GAENVAARDKADSKVTNFTSAAEGVLTVDNSDLNFGETLDVLVRIVDDAIEEQEYRQYVS NLEGYELDEGDEELIDGTAFSGGESKNGPKPVGVLAVVGRPNVGKSTLVNRILGRRAAVV EDTPGVTRDRVSYDAEWCGTDFKLVDTGGWEADVEGIESAIASQAQIAVQLADAVILVVD GLVGLTDTDERIVKMLRAAGKPVTLAVNKVDDRESEYLTAEFWKMGLGEPYGISAMHGRG IGELLDAALDSLKKAERTSGFLTPSHLRRVALVGRPNVGKSSLLNQLAHEERTVVNDLAG TTRDPVDEVVTVDGEDWLFIDTAGIKRRLHKLSGAEYFSSLRTQAAIERSELALVLFDAS QPISDQDLKVMSQAVDAGRCIVLVFNKWDLMDEFDRQRMERLWKTEFNRVTWAQRVNLSA KTGWHTNRLANAMRGALASWDKRIPTGKLNAFLGKIQAAHPHPLRGGKQPRILFATQAST RPPRFVIFATGFLEHGYRRYIERCLREEFGFEGSPIQISVNVREKKKRK >gi|148337404|gb|DS264455.1| GENE 56 61120 - 61893 947 257 aa, chain - ## HITS:1 COG:MT1751.1 KEGG:ns NR:ns ## COG: MT1751.1 COG1187 # Protein_GI_number: 15841171 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 8 257 3 254 254 227 49.0 2e-59 MPNAYSRAAKAHNHDNEGIRLQKLLAQAGFGSRRKCEEIITDGRVEIDGELITELGTRVD PKRQEVRVDGSRVRVNPNHVTLALNKPKRVLSAMEDPKGRYTLRDIVGDKYERIFHMGRL DYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATLEGRISGQVCRRLVTTGVKLDDGWIK LDRCAILDSSRESTLVKVVLHSGKNRIVRRIFGSIGFPVKRLVRTQIGPIKLGDLKSGTY RVLSQAEVRSLSKAVGL >gi|148337404|gb|DS264455.1| GENE 57 62006 - 62941 1184 311 aa, chain + ## HITS:1 COG:PA4034 KEGG:ns NR:ns ## COG: PA4034 COG0580 # Protein_GI_number: 15599229 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Pseudomonas aeruginosa # 23 265 5 229 229 84 30.0 3e-16 MTAVEATSVTEEEQSKPLALRVGAELVGSFIICFAIYSICTLGSAIYGVNMAFIALLTGL VYAAATLIFGTISGAQFNPAVSVAAMLSGKTHVLDGVLYIIAQVLGGIGAGAAIRFLLPT SEQVTLKIWLTPVINGFDKNSVSYATLGNYGVSFSITLAIAVELVAGIIIVATALNTTSE SGKTNTSHAIAMGLAYGVGAAISYPVTGAALNPARATGIAIFAQNQGLSQEPLQQLWVFW ICPILAAAIVSLVAIVASMIGTKKNVSEAEQDSETLETIADDASDDADGHEGEQDEQSDA QTDADESVEAN >gi|148337404|gb|DS264455.1| GENE 58 62855 - 63139 240 94 aa, chain - ## HITS:1 COG:no KEGG:BLD_0460 NR:ns ## KEGG: BLD_0460 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 2 84 3 85 100 107 63.0 2e-22 MSHPYVSEDHEGKPWFEWIVAAMVVIATVLAVLGHVKAATTVIAVTAIITGLIRLVMRER SPWKVRSVGFDAFIGIGLGVGLFILLALVPVGIV >gi|148337404|gb|DS264455.1| GENE 59 63296 - 64924 1898 542 aa, chain - ## HITS:1 COG:MT0984 KEGG:ns NR:ns ## COG: MT0984 COG0138 # Protein_GI_number: 15840381 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Mycobacterium tuberculosis CDC1551 # 6 542 8 523 523 572 57.0 1e-163 MTTTNRPIRRALVSVFHKEGIEVLAEAFIKAGTEVVSTGSTAKRLAELGVKVTEVSEVTG FPECLDGRVKTLDPHIHAGILADMTNPDHASQLEKFGIKPFDLVVVNLYPFADTVRSGAD EAATIEKIDIGGPSMVRGAAKNSATVAIITDPNDYALVASRIENGEGFSLDERRWLAGKA FAHTAAYDATINEWTAKHWPKPASIEQPVSEGETEVNEAKFPATFTRTWDRAHVLRYGEN PHQQASLYLDPLNQNGFAHAEQLGGKPMSYNNYVDADAAWRAVWDFAPQIAVAVVKHNNP CGLAIGATVAEAHKKAHACDPMSAYGGVIAANSKVTMEMAESVRPIFTEVIVAPDYDADA LELLQTKKKNLRILKVSEPPKTKTQFRQIDGGLLVQSTDLIDAPGDDPNAWKLVSGEPAD AETVRDLVFAWRAIRCVKSNAILIAHDQATVGIGMGQVNRVDSANLSVERANTLADGANR TKGAVAASDAFFPFADGAEILINAGVKAIVQPGGSIRDEEVFEAARKAGVTMYVTGTRHF FH >gi|148337404|gb|DS264455.1| GENE 60 64872 - 66257 567 461 aa, chain - ## HITS:1 COG:no KEGG:BAD_0810 NR:ns ## KEGG: BAD_0810 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 461 1 461 461 816 99.0 0 MTNLKYWLKGLAVAAVSMIIYAVALGCYMALMLLVISMEEGGDNLSAFSVPLTEALVLLS QGIGFKTDAITLTIVPLLLTVLLIALIAQLARRFGTSLRGFAAGLVFWEAVNIFFARSIN IEIVDSMTMIAIKTALVFILGYAVAAIPNASWTQACTEWIRSHVSSPVRKTMVIGSVLGL LLEAAYLLVGLIVVVFWAISNQSSIAKLYELSGMQNGSRILTTISMLAWLPNLMIWAVSW TFGAGFSIGDLAEFTLWTGQGDGLPALPLFGMMPQAVETDWVRIALMCIPLASAFATGMV VMLFNKGFHIRVGESGRNIDVKRVVLSFAYPIAAFSITSAVVSVASSLLFALGNGGLGSK HLAHVGVDVIASTRKVGQPTAMGLFSAWLLTLVAVSIFFAIRWMMKRIRERGKRETAPES TENSREETRALRTVASNNNNKEDQCDNNESTDTTGSGISLP >gi|148337404|gb|DS264455.1| GENE 61 66257 - 67180 920 307 aa, chain - ## HITS:1 COG:ML0156 KEGG:ns NR:ns ## COG: ML0156 COG0074 # Protein_GI_number: 15826979 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium leprae # 1 304 1 299 300 308 58.0 8e-84 MTLFIEDGAPVIVQGMTGHQGMTHTARMLKAGTNIVGGVNARKAGLDVTFPEAKNGEDAT IHVFANCSEAIEATGAKASVVFVPPRFAKDAVVEAIEAGIELIVVIAESIPVADSAYFVE LALRKGVRIVGPNCPGLLTLPSSKDAKGCNLGIIPDGIVSRGPLGLVSKSGTLTYQLMGE LSDIGFTACLGAGGDPIVGTTLQEALEAFENDEATKAVVMIGEIGGSAEQDAAKWASEHM TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKEALEAVGIRVGRTPGQTAEIMRE VLASQSL >gi|148337404|gb|DS264455.1| GENE 62 67182 - 68369 1373 395 aa, chain - ## HITS:1 COG:ML0155 KEGG:ns NR:ns ## COG: ML0155 COG0045 # Protein_GI_number: 15826978 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Mycobacterium leprae # 1 390 1 391 393 328 46.0 8e-90 MDLYEYQARELLEEQGIPTPKAIFAQNSHEVAEAADQIGYPNVIKAQVKIGHRGQAGGVK LAKTRDESILASEDILPMTIHKHKVSGVLVAEAKNILHEYYVSISVDRSSRDFDVLATAN GGTEVEEIAKEHPESVKRLHIDALDDFDLEAATKMAESIGFYHADVDQAAQILLKMWRCF KENDATLVEINPLAKIGDPDDESSKSLCALDAKISLDDNASFRHDGWKRFTDPIHVDPYE QKAREHGLHYVHLKGSVGVIGNGAGLVMSSLDAVSGAGEDQGTNVKPANFLDIGGGASAE VMSNSLEIVLSDPQVESVLINVYGGITSCEQVAKGILEALDELGSSKPIVVRFDGNAAAE GLNILAQAGRANLHVAQTMEEAAQQAARFAAKEVR >gi|148337404|gb|DS264455.1| GENE 63 68421 - 69002 400 193 aa, chain - ## HITS:1 COG:SPAC23A1.03 KEGG:ns NR:ns ## COG: SPAC23A1.03 COG0503 # Protein_GI_number: 19115345 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Schizosaccharomyces pombe # 21 189 8 175 188 149 47.0 3e-36 MAASDITVSGLNKVGAEDAAYLVSKIRTIPGFPKEGILFRDFMPVLADARAFGILMGALE AALPVDVDDFDMVAGLEARGFLFGPALAARLGKGFIAVRKAGKLPPETMSQSYDLEYGQA SMEIETNVVHEGVRVLIVDDLIATGGTANAARSLIEKCGGVVAGFSFVMELTGIDGMKSL GDYPTSSLVCMPA >gi|148337404|gb|DS264455.1| GENE 64 69118 - 69486 531 122 aa, chain - ## HITS:1 COG:no KEGG:BAD_0806 NR:ns ## KEGG: BAD_0806 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: Protein export [PATH:bad03060]; Bacterial secretion system [PATH:bad03070] # 1 122 16 137 137 211 98.0 9e-54 MMFWQSKKAKQQQAERQNFRSSLQPGTEVITIGGIIGKVVSVDTEYEEIVVDSEGSQLRF GFNAISREYVRPAYVHDDEVDENGNPLSKEDEPDQKPIVDATEEPAQDADVIQQPIDEQK NN >gi|148337404|gb|DS264455.1| GENE 65 69588 - 70661 997 357 aa, chain - ## HITS:1 COG:MT2669 KEGG:ns NR:ns ## COG: MT2669 COG2255 # Protein_GI_number: 15842132 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 346 3 333 344 372 61.0 1e-103 MTNTDTFEQPNTGANEESLRMVSAAPVGNEPVSDEELRPHILKGFIGQPRLKAQLQLFLD AARKRDVPPDHILLAGPPGLGKTTLAMIVANELEVPIRVTSGPAIQHAGDLASILSSLDA GEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVIGATTREGM LPSPLRARFGFTAHLDFYPHEELEKLIERSSAVLGIQLEDGAARQLAMRSRGTPRIANRL LRRVRDWAIVHDLESVRPDDVKEALALYQIDTEGLDRLDIAVLKAIVTNFNGGPVGLNNL AAMVGEESETVETVCEPYLVREGFLIRTPKGRVATRKAWEHLGITPDESAYDVNKMS >gi|148337404|gb|DS264455.1| GENE 66 70673 - 71290 491 205 aa, chain - ## HITS:1 COG:SA1468 KEGG:ns NR:ns ## COG: SA1468 COG0632 # Protein_GI_number: 15927222 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Staphylococcus aureus N315 # 1 175 1 179 200 114 34.0 2e-25 MIGMLRGHVESVDAVSAIIEVGGVGYEVRMPSADLASMHAGQEIKVYTSLNVSQDAITLF GFGTLASKRMFLQLQKVSGIGPKVALSLLSTLPPDRLARAVADGDATALAKAPGLGKKGA QKIILELKGSIDLSQIEGSSATASTPEDTGAEQVVEGLMSLGWHQQDAAHAVQTVCADNQ IETPLNAEDVPRVLKLALTSLDRGR >gi|148337404|gb|DS264455.1| GENE 67 71338 - 71919 381 193 aa, chain - ## HITS:1 COG:MT2671 KEGG:ns NR:ns ## COG: MT2671 COG0817 # Protein_GI_number: 15842134 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 185 1 188 188 135 49.0 6e-32 MIILGVDPGLTRCGVGVIEAGAYRRLSFIHVDVVRSDPKTSQDLRLLAIYNGLVEKIERF APDAVSIERVFAQENRNTVLGTAQAAGLAMLAAAQRGIPVALHTPTESKLAITGNGKAEK IQMERMVARILGLNTLPKPADAADALAIAICHALRPAGALQGGEREQHLTAAQRQWAQAS QKAARRQGVRRGM >gi|148337404|gb|DS264455.1| GENE 68 71926 - 72681 965 251 aa, chain - ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 251 1 251 251 285 59.0 5e-77 MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARMGGGDPDGNPSLYDAIYKAKKAS MPADNIKRAVKRGSGEEAGGANYEDIVYEGYAPAGVGLIIECLTDNRNRAAADVRSTLTK GNGSLATTGSVSFNFERKGQIVVPAEGVDFDNLFEKAAEAGAEDVTDDGEVFTVITDPSD MIDVRKALQDAGFDYDSADLVMMPKNEVELSLEDAQKVSKLIDNLDDLDDVQNIYSNWTA SDEVMAQLDEE >gi|148337404|gb|DS264455.1| GENE 69 72812 - 73474 694 220 aa, chain - ## HITS:1 COG:ML0454 KEGG:ns NR:ns ## COG: ML0454 COG0558 # Protein_GI_number: 15827145 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium leprae # 6 204 9 196 239 105 37.0 9e-23 MLEHLRAPFKKLIEPIAKALIAIGLTANAVTVIGAVGTIVVAIATGVTGWLFGGAVVLTL LVLADSLDGSIAALTTGGTEFGAFLDSTLDRIADWAMLVGVIIFFLMHRDWWHTAIDNTP DYTSMIGIAAAAVAVMTSFVTSYARARAESVGYEVKNGIATRADRLTIILVGMAITGLTR QGLWLAIAMILLAGLGLVTVFQRIFEAKRQMVIGEKTYRR >gi|148337404|gb|DS264455.1| GENE 70 73588 - 75621 2977 677 aa, chain - ## HITS:1 COG:Cgl1631 KEGG:ns NR:ns ## COG: Cgl1631 COG0441 # Protein_GI_number: 19552881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 40 674 47 684 686 819 63.0 0 MAEQTISITLNGEKKEVAADQTGVQLFSDDKNIIAVRLNGEPRDLYTELHDGDVVEPIAL DSEDGVAIMRHSATHVMAQAVQEIRPDAKLGVGPVIKDGFYYDFDVETPFTPEDLKEIEK RMQRIIKSSQSFRRRVVTEEEALAEEADQPYKLELIKDKEAHLDPEAATEISGKELSFYD NVDREGNVVWKDLCRGPHLPNTRYIKAFKIERSAAAYWRGSEANPMLQRIYGAAFATKED LKAYQTRLEEAAKRDHRKLGAEMDLFSFPDEIGPGLAVFHPKGAAVINAMEDYSREMHRK HHYSFVQTPHITKGGLYETSGHLQWYKDSMYPPMRLDEEKDENGNVIKQGFDYYLKPMNC PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK DELKSLLTFVLGLLKDFGLDDFYLELSTKDPHKYVGSDEIWEEATNTLAEVAKESGLDLV DDPCGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFKLEYIAADGTHQRPVMIHRA LFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLQKFIASLEEETVRCEIDL SDDRFGKKIRNASKSKAPFILIVGEEDMNNNAVSFRFRDGSQLNGVPVDEAKANILTVIK KRVQVNTADDFKAALAD >gi|148337404|gb|DS264455.1| GENE 71 75783 - 76610 866 275 aa, chain - ## HITS:1 COG:MT1873 KEGG:ns NR:ns ## COG: MT1873 COG3879 # Protein_GI_number: 15841295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 50 273 64 291 292 106 32.0 5e-23 MSGQDANSKDMLSRIHEQRVKDQNNDSTQTGAFPMVKAKKRISLDAKVTRTRLYSSILVT ILCALLGFGYVIQINNTTSTYETMSEDELTKLISETNAQVQKLEQRKNELSSQLNALKDT ADKNEKAAEIAKQNAQTNGILSGRLAATGEGVVIRISQGSKQKIDSAILFTLLEELRNSG AEVIEINNVRVVTSTYISGTAGSLVCDGTKLKSPFTIRAIGDSDNLQNAVNLAGGVGSRL KVKYGATVSVSPSDKVMIKSTRQAPQYTYAHVIGQ >gi|148337404|gb|DS264455.1| GENE 72 76617 - 76949 400 110 aa, chain - ## HITS:1 COG:MT1872 KEGG:ns NR:ns ## COG: MT1872 COG3856 # Protein_GI_number: 15841294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Mycobacterium tuberculosis CDC1551 # 1 108 12 119 121 92 54.0 2e-19 MAAVLGLIIGVVIGVFVRPDIPIELQPYLPIMVLAALDALLGAARAYFQRSFSDKVFVIS FFSNVITATLLVFLGNQLGVGSQLQTAVIVVLGIRIFTNVSSIRRFIFKG >gi|148337404|gb|DS264455.1| GENE 73 76949 - 77920 707 323 aa, chain - ## HITS:1 COG:MT1871 KEGG:ns NR:ns ## COG: MT1871 COG3879 # Protein_GI_number: 15841293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 171 270 157 254 309 76 45.0 6e-14 MKSDAPRFASFPVSPENVPTKHRAIFSSSFAGLSSHHVQPASMPAMPQRHRHVDDDSLRL IDDLTNRPMDVLYSDSRLATKKRSAVSIWATRILVFLICIAVGAAGSVFVRQLSTDPRKE VRKQLASQLTEQTKRVGDLTKGVNDLRSQIESESESLASWSLNQTMQDDEMVNGTLPVQG EGIVLTVANPLSVSGDNADSSLPRENGSQVRVVTDSDLQLLVSLLWQSGAEAIAINGNRL GVQTSIRTAGSTILIGVNSVQSPYRIEAIGNQATLAKSVSKTTQKQLYDDFKKAGIYPQI SKSKSITLDAAVAGDTTHVRKDK >gi|148337404|gb|DS264455.1| GENE 74 77928 - 78539 612 203 aa, chain - ## HITS:1 COG:MT1870 KEGG:ns NR:ns ## COG: MT1870 COG0558 # Protein_GI_number: 15841292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 19 190 11 182 209 95 34.0 6e-20 MSKLIIKKQYSPEPRDIYFTVPNFISLLRIISIPFIAMLVSHHRMVTALVVLALSAISDG LDGLIARSFNQVSKIGQILDPIADRLLIFCSILALGVANIIPWWMLIVVGLRDLIMAVLI LVLAQHDYGPLPVHFVGKAGTAMLLIAIVALIFADIWSNSAADTLHLCGLATGIWGVGLY WLAGYIYMRQGIQLLKNDTNSKD >gi|148337404|gb|DS264455.1| GENE 75 78553 - 79404 728 283 aa, chain - ## HITS:1 COG:MT2181 KEGG:ns NR:ns ## COG: MT2181 COG0040 # Protein_GI_number: 15841613 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 282 1 283 284 265 50.0 6e-71 MLRIAVPNKGMLSEPAWNMLAEAGYRLRSNPRQLVVEDPDNDVELFYLRPLDIAVYVGRG TIDVGITGHDLLVNSGTDAEEHMQLGFGASTFRFAAPNDSPITKLEDIEGKRVATTFDKL VHDYLVEHGINAETVHLDGAVESSVQLGVADLIADVVSTGTTLRNAGLRIFAEPLMHSEA VLIRSPRLEADDERLTILSRRLQGVLTAQRNVLMDYDIPVEKVSAAVDITPGFESPTISP LHDKQWAAVRVVVPKAKVNQLMDQLYEVGARGIIVTALQASRM >gi|148337404|gb|DS264455.1| GENE 76 79456 - 79719 453 87 aa, chain - ## HITS:1 COG:MT2182 KEGG:ns NR:ns ## COG: MT2182 COG0140 # Protein_GI_number: 15841614 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 1 87 7 93 93 93 56.0 7e-20 MKTFESLFAELSEKAATKQAGSLTVDELAKGTHFIGKKIVEEAGETWIAAEYEGADRTAE EMSQLIYHLQVMMIDRGITLEDIYKNL >gi|148337404|gb|DS264455.1| GENE 77 79749 - 80414 820 221 aa, chain - ## HITS:1 COG:Cgl1560 KEGG:ns NR:ns ## COG: Cgl1560 COG0036 # Protein_GI_number: 19552810 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Corynebacterium glutamicum # 5 216 8 219 219 218 51.0 8e-57 MTIQIAPSILSADFCNLERDLKAISNADLVHVDVMDHHFVPNLTLGEPIVARICQVTDLP VDVHLMIEDPDRWAPEYAKLGAASVSFHMGATHAPVRLARQLRDMGCKACFAVRPAEPVE PIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLKTKIQVDGGVSPKT AHIVAEAGADVLVAGSAVYGAENPAEAIDSIREKAEAAFKA >gi|148337404|gb|DS264455.1| GENE 78 80449 - 81459 1020 336 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 1 280 1 278 316 245 45.0 1e-64 MTLAYIPSPTISQFSIGPVTIHFYALCILLGIVLAVWMTTVHWKRYGGNFDQILDITLVA VPSGIIGARIYHIITTPERFFGPTGDWVEMFRIWNGGLGIWGGVLLGALAAWAWCRNKHY PMALLGDAVAPGLLVAQAVGRLGNWFNQELYGAPTTLPWGLKLNMEGSAIGHSEQCYDGA TCPTGTLFHPTFLYEMIWNLIGAALIVFLGSKIMKKLKAGSLFAIYIMWYTAGRTWIEAL RIDFAHEFLGVRINVWVSMAVFVLGVVAFIVIQQMGKSTELLAEKLRTVTEIELSLVEDG ETGLPTAKANLTKTKDEITANDGSSVSYADDQSDNK >gi|148337404|gb|DS264455.1| GENE 79 81529 - 82404 352 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 24 289 5 263 263 140 33 7e-32 MTNATSSTPSGQPLGISHKPSPTETMFDEFKAADKPAFIGYLPYGFPDPDYSLKAFRTMV EHGVNAVEIGLPYSDPVMDGPVIQAASQIAIDNGEKIANVFKAVETVANAGGVPLVMSYW NLIFHYGVERFARDFENAGGAGLITPDLIPDEAGEWIEASDRHGLDRIFLVSPDSTEDRL KVVADNARGFVYAAARMGVTGERSTIDASPKELVARTRKAGAKNVCVGIGVSTAEQGARV GSYADGVIVGSALVHTMLDESGKHAVDEATGLKALVAKTEELAEGIHNARN >gi|148337404|gb|DS264455.1| GENE 80 82422 - 84515 2238 697 aa, chain - ## HITS:1 COG:MT1647 KEGG:ns NR:ns ## COG: MT1647 COG0133 # Protein_GI_number: 15841065 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium tuberculosis CDC1551 # 266 679 18 422 422 477 60.0 1e-134 MSVLDELVAGAVEDQRSRENNVPLAEVKRMAFEASAPIDARQWLKKADGIPVIAEIKRAS PSKGHLSDIPDPAALAREYEQGGASAISVLTEGRRFLGSLEDFDKVRAAVRIPVLRKDFI VTEYQIWEARAHGADLVLLIVAALDDVKLKSLLDLAHSLNMTVLVETHTREEIQRAINAG AKVIGINARNLKDLKVDVNKYNELAADLPDDVIRVAESGVFGSVELEDYARAGADAVLVG EGVATAANHEQAVERLVKAGARVKASEQTPLASHEGPYFGQFGGRYVPEALITALDELER VYTEAKADPEFHKELARLNQQYVGRPSPLTEAPRFAQRLKEKTGLDARVFLKREDLNHTG AHKINNALGQALLVKRMGKTRVIAETGAGQHGVATATVCAMLGLKCRIYMGQIDARRQAL NVARMRMLGAEVVEVTLGDRILKDAINEALRDWVTNVKDTHYLLGTVAGPHPFPSMVRDF QKIIGEEAKQQLQDWYGIDHPNAICACVGGGSNAIGIMNAFLDDERVNLYGYEAGGNGPE SGRHAIRFAPGTGELGMFQGAKSYLLENPEGQTLDTYSISAGLDYASVGPEHAWLKDIGR VNYSWATDQEAMSAFKDLCETEGIIPAIESSHAVAGAYKAAADLKAKGYEHPVMIINISG RGDKDMDTAGKWFGYLTDEQAKALESNGAQGNNADGE >gi|148337404|gb|DS264455.1| GENE 81 84559 - 86115 1287 518 aa, chain - ## HITS:1 COG:ML1269 KEGG:ns NR:ns ## COG: ML1269 COG0147 # Protein_GI_number: 15827651 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Mycobacterium leprae # 13 518 6 506 529 429 48.0 1e-120 MSECSVQTLKWGATWPSREQFHELADQGYRVIPIVRRLLADSLTPVGFYERLAGGRSGTF ILESAEFGGAWSRYSFIGVNSMAQLRSNNGKADWLGQVPVGVPTDGDVVEVAHAALKTLK APHVEGLPNLTSGLVGTVGWDSIRHWEPTLRAEAPNETGQPETVLALATDIAVVDHVSGS VWLIANAVNVDDRPTRADAAYDEALARLDDMQRKAAAPVENEARVNVLDESVGQPQLRFR TEKSDYERSVEEAKRHIIDGDVFQVVISQRLDIDSPADPFDVYRVLRTLNPSPYMYFMAL TDAQGRDFNVIGSSPETLIKVDNGHAMSFPIAGSRPRGATPEEDERLAKELLADPKERSE HIMLVDLARNDLSRVCRPESVEVVSLMDIKRFSHIMHICSTVTGQVDPHMTAFDVFTSAF PAGTLSGAPKPRAIEIIDELEPADRGIYGGTVGYFDFSGNLDMAIAIRTAFIRDHEASVQ AGAGIVLDSVPASEWQETRNKAEASVEAVQIAAQLRQL >gi|148337404|gb|DS264455.1| GENE 82 86112 - 86519 306 135 aa, chain - ## HITS:1 COG:CAC0942 KEGG:ns NR:ns ## COG: CAC0942 COG0139 # Protein_GI_number: 15894229 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Clostridium acetobutylicum # 25 118 14 113 115 132 61.0 2e-31 MTNEAYDNTTTLDPRIAQRLKHDDKGLVAAVIQQFDTKEVLMVGYMNDEAIRRTLTTGRV TFWSRSRQEYWRKGDTSGHAQYVKSFALDCDGDAILVEVDQVGAACHTGKRSCFEEGGQL PVVVGHRTKEQEGQR >gi|148337404|gb|DS264455.1| GENE 83 86583 - 87353 704 256 aa, chain - ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 256 1 257 258 314 69.0 1e-85 MSLAVRVIPCLDVDAGRVVKGVHFENLRDAGDPVELAAEYYRQGADELTFLDVTASSSHR QTMVDVVSRTAEQIFIPLTVGGGVRTPEDVDSLLRCGADKVGVNTAAINDPTLISRVAER FGNQVLVLSVDARREQGERHTQSGFEVTTMGGRKSTGIDAIWWVKRAQELGAGEILLNSM DADGTQQGFDLEMIKAVRKEVKIPIIASGGAGKASDFPPAIEAGADAVLAASIFHYGKVT IGEVKDAIKAAGYTVR >gi|148337404|gb|DS264455.1| GENE 84 87468 - 88637 838 389 aa, chain - ## HITS:1 COG:Cgl1973 KEGG:ns NR:ns ## COG: Cgl1973 COG0820 # Protein_GI_number: 19553223 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Corynebacterium glutamicum # 31 387 13 364 366 394 56.0 1e-109 MNSMNDQPETGITPGGTSGAFRDVLSKDHARRGKPPLHFADMSEEERIGKAKELGLPKFR VKQLANHYYGHFDVNAEEFSDFPAARRSDAAEAFFPELIHEVTRQVADGGTTIKTLWRLF DGSLIESVLMRYPTRTTLCISSQVGCGMGCPFCATGQLGLTRNMSAGEIVEQVRVAAKAM RDGEVAGGSGRLSNIVFMGMGEPMGNYKSVLSAVRQISSMPPEGFGISARNITVSTVGVV PGIRKLAEEGIPVRLAVSLHAPSDELRDELVPMNKRFNTKQVLDAAHDYYLASKRRVSIE YALMRGINDQAEHAKLLAKRLNHYGDDWAHVNPIPLNPIEGSKWTASKPEDERRFLEILH NAGITATLRDTRGQDIDGACGQLAAKERD >gi|148337404|gb|DS264455.1| GENE 85 88654 - 89640 727 328 aa, chain - ## HITS:1 COG:Cgl1975 KEGG:ns NR:ns ## COG: Cgl1975 COG0575 # Protein_GI_number: 19553225 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Corynebacterium glutamicum # 23 323 9 276 285 119 30.0 1e-26 MEKQEQREKEAEEAINAINKKTGRNMPQAIATAVVLIAIILACLLISVDLFVYLVVLFMV LALWELRVDFATAGLHIPVVVLWACSAVTLLATYYSKHHIVAMTVCVLASLLLVAIAASA KVTFGSRLSLAVADKLSHTDAGARLESSFNHEQGEVRHSRLSHVAVSMFTVLYIPLLASC LIMPLTFNGHPVAHAIMLVFMPALSDTGGLFAGAWLGKHKLSPRISPKKSWEGLAGSILF AMAGSFVVMFCTYEPSVWTVRWWVPIVAGFMIGIAGTFGDLCASMLKRDIGIKDMGHLLK GHGGVMDRVDSILLCAPFVCVLLWTTGM >gi|148337404|gb|DS264455.1| GENE 86 89697 - 90251 834 184 aa, chain - ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 4 184 5 185 185 175 52.0 3e-44 MATIVDQAKAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPE PRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKIAKGKA EDGKVAVRNIRRKAKESLDKAIKDGDMGEDEGDRLLKELDKVTKQTTDELDALLETKQKE IMEV >gi|148337404|gb|DS264455.1| GENE 87 90304 - 91053 906 249 aa, chain - ## HITS:1 COG:MT2951 KEGG:ns NR:ns ## COG: MT2951 COG0528 # Protein_GI_number: 15842425 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 12 242 44 273 273 268 62.0 1e-71 MTGENTGDNPRRVLLKLSGEAFGGGKVGIDTTVVRRIAEEIVPAVKQGVQVAIVVGGGNF FRGAELQQAGIDRSRGDYMGMLGTVMNCLALQDFLEQEGQATRVQTAITMGQVAEPYIPL KAIRHLEKGRVVIFGAGAGMPYFSTDTVSIQRSLEIHCDEVLMGKNGVDGVYTADPRKDE NAKRFATLSYNRALVDNLAVMDAAALSMARDNKQRIRVFGLEGAGNVTQALLGEEIGTMV STAESTLAE >gi|148337404|gb|DS264455.1| GENE 88 91233 - 92108 393 291 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 288 1 263 283 155 35 1e-36 MAAITAALIKQVREETGAGMMDVKKALTEAEGDVARAKEIIRAKGIQAAGKREGRKAQEG TIASTVVESANGQTGYAVELNSETDFVAKTPKFVEFAGSVLDDAVKAEASSVDEVLAAAS GDTTVKEAVEEAAALFGEHVKVGQFAKVEGPHVEVYAHKKSAEMPPSIVAMIATDEAGAA VAHEAALQISAMGAQWLTREDVPADVLESERRVATEKTTEELKSKGKPEAVIEKIAPKIV EGRLGAFYKETVLLEQAYVKDPSKTVGDLFKEVGGTALSFARVEVGKGDAE >gi|148337404|gb|DS264455.1| GENE 89 92184 - 93077 1509 297 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025799|ref|YP_909644.1| 30S ribosomal protein S2 [Bifidobacterium adolescentis ATCC 15703] # 1 297 1 297 297 585 100 1e-166 MPARHWLHAGTHDQARTDKERGSNTMAQITMSDMLKAGLHFGHQTRRWNPKMKQFILTQR NGIHIINLFKSLDMIDKAYDFIKATVAHNGTVLFVGTKKQAQEAVSAQATRVNMPYVSER WLGGMLTNFQTVSKRVSRLKELEEMDFTDVHGSGLTKKELLLLEREKDKLAKQLGGIRNM NRTPSAMFVVDVNKEALAVEEAHKLGIPVVAIVDTNADPESVEYPIAANDDAIRGIELLT SLMADAVAEGLLERSGKAAKAEGEAEQPMAAWEKELLTEGAPAAEAPAEAEGETKAE >gi|148337404|gb|DS264455.1| GENE 90 93264 - 93749 412 161 aa, chain - ## HITS:1 COG:MT0444 KEGG:ns NR:ns ## COG: MT0444 COG0242 # Protein_GI_number: 15839816 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Mycobacterium tuberculosis CDC1551 # 1 159 1 177 197 132 44.0 3e-31 MAIREIRVVPDPVLRTPCDPIKEITPAVRHLVQDLLDTVDDPGRAGLSANQIGVSLRAFS YNIDGKIGYVLNPVLEETSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGKPVVLEG HGIMGRMLQHETDHLDGHVYLDRLEKEERREAMRYMRTHRK >gi|148337404|gb|DS264455.1| GENE 91 93752 - 95791 1822 679 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 599 1 596 600 450 41.0 1e-126 MLREFVPEPAYSTTDDDTVYALLSRRAQKNPDDLIAQWQDDETRQWHDVTAGQMLARVRA VAKGLIGLGVKAGSMVVIYSPTCYEWGVADFACAAIGAVSVPIYETDSAKQAASIVEEVE PVIAFAGDSVHTQTLEQIRDMHEGLRYVFNFKADGLDAVADFGEGVDDDTLDQVIARIKA DDMLTIVYTSGSTGRPKGAMLSHRNFTHIVLNGYIILDEMLYQPNRLMLFLPLAHCFARY IQYVAIGGQGVVGYLPGAKHLLADLRSFKPTYLLGVPRVFEKVYNAASQKAGAGIRGRVF AKAFDHFVQWSKDEQDGGHHSMVARAEHSFFMSVVGKSIRSALGPNLKYLACGGAPLNVD LAHFFNGMDGITFIQGYGMTETAAPMIVNWQNANRVGSVGKPGPGMGVRTDDDGELQVMG PNVFLGYYKNPEKTAEVKMPDGWLRTGDLGAIDDDGFVYITGRKKDIIITAGGKNVSPAP MEDIIDTCPIVSHAVVIGDGKPFISALIELDSDMTRSWLSQQGLDADMSMKQVAENDAVR AFVQQYVEKANANVSRAESVRKFEILDEEFNQQDGTLTASLKVVRPKVLQRYADVIENVI YAPKPSNRPLPKTVQILDRTTETVKQASESMRQASESVSPKVRQAFDTMQERIKKQSDEP DDETAPSVEPSATKNNEER >gi|148337404|gb|DS264455.1| GENE 92 95909 - 96559 343 216 aa, chain - ## HITS:1 COG:no KEGG:BAD_0778 NR:ns ## KEGG: BAD_0778 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 216 1 216 216 448 100.0 1e-125 MAMDDLSDDGVSPPEWQSGSEREPEDDKEIEGNEPDEIPPSDPDSYVGLKEAENNGQWLQ CIGKSVEKLPSYDGFLETQLSGMRVPFHVIRSDSTPWDAKQAYSLALLGARMSCDAIDIF RGRQKPAHVERILTEDCMRRLKIAASIIGHYMKEDANLYAKIGLLPINVSAINGWLTSTT KFECAALLNIGETRLRCNTAFRLKGSTWKCVLADFG >gi|148337404|gb|DS264455.1| GENE 93 96708 - 97826 1187 372 aa, chain - ## HITS:1 COG:slr1722 KEGG:ns NR:ns ## COG: slr1722 COG0516 # Protein_GI_number: 16330504 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Synechocystis # 5 371 3 369 387 329 48.0 6e-90 MSQEIEIGLGKKGRLAYSLDDVSIVPSRRTRDPQDVSTSWQVDAYEFDVPVIGAPMDSVT SPATAIAMGKMGALGVLDLEGLWTRYDDPQPLLDEIAQLPADKATERIQQIYAEPIKPEL IVERLHEIRDAGVTVAGALSPQRTQDYYSTVLEAGVDLFVIRGTVVSAEHVSKDHEPLNL KKFIYDLDVPVIVGGAANYTAALHLMRTGAAGVLVGFGGGAVSANRNTIGVHAPMATAIA DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKAFALGADAVMLGSPLARASEAPGKGM HWGAEARHQTLPRGFRTNVGTVGSLQEVMFGPSHNADGTTNFVGALRRAMATTGYVDLKS FQRCPVTVASSH >gi|148337404|gb|DS264455.1| GENE 94 97962 - 99182 1670 406 aa, chain + ## HITS:1 COG:BMEI0791 KEGG:ns NR:ns ## COG: BMEI0791 COG0538 # Protein_GI_number: 17987074 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Brucella melitensis # 1 405 1 403 404 639 75.0 0 MAKIKVEGKVVELDGDEMTRVIWKDIKNRLILPYLDVDLDYYDLGIENRDATDDQVTVDA AKAIQREHVGVKCATITPDEARVKEFGLKKMWKSPNGTIRNILGGTIFREPIVMSNVPRL VPGWTKPIVVARHAFGDQYKATDFKVPGAGTLTVTFTPEDGSEPIEHVVYNYGPDGGVAQ VQYNVNDSIRGFARACFNYGLMRGYPVYLSTKNTILKAYDGQFKDTFAEVFENEYKDKYE AAGLTYEHRLIDDMVASSLKWHGGYIWACKNYDGDVQSDSVAQGFGSLGLMTSVLMTPDG QTVEAEAAHGTVTRHYRRWQKGEKTSTNPIASIFAWTGGLKHRADLDNTPEVKHFAETLE KVIISTVEGGQMTKDLAMLIGPDQPWLDTEGFMNALDENLAKALAE >gi|148337404|gb|DS264455.1| GENE 95 99304 - 100812 1191 502 aa, chain + ## HITS:1 COG:no KEGG:BAD_0775 NR:ns ## KEGG: BAD_0775 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 502 1 502 502 865 99.0 0 MILHRTIPAKRLLALLASVCMATAMGACSPNGDSQSQQQPSSQSSATADAGNVAIFAPTD SITISQQTPLSKWEKLVPEIVSSLKRTGVKSGDITVKTASNLDKQSQSVQDYVVNHINGT EHSSTKAKTTLVVAPVAEMPESDRQYGDYARHDITWNSDASDEDEQDYAQSAQRLVSALQ LAQNEGMKVVLISNTLQGYAPDVYVPMTTAEQIGELQAKELVNKLELDKASSDAPKQIEV LLPYDAADGHDAKTDTSFAQNMFKGIWKVLEPYFKDGKAASPSETLTVSTTKDDWRSVAF DSSKAEQIKSVLAERLDADKDDSHPVHLDGVISCNDYVAKNIADELDKLGYTGSSADINP SISISGIVDSITGKKDLKRQAVPDPAKTSSSDDDSDSDNKENAKWPIITGYGAYISSMPN IVNGKQWMTAMENRKALADDIAQTCVRLNTSGKLSKLGFIRSATVEGKKITTIHEETLAI SADNLKKTLIEPGYISLADAGL >gi|148337404|gb|DS264455.1| GENE 96 100892 - 102721 1564 609 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 597 1 596 600 476 41.0 1e-134 MIKEYTRPLEQGIDSDKNIFSVLEERVERTPDDNLVEYKNAQGEWVAFTAAEFKNKVVAL AKGLIARGVMPGDSVSIIAHTCWQWTALDVAIMSIGALTVPVYETNSPAQVKMIFNDANV KMAFAEDDFQRDKIESVRDQCPDLGDVYVIGLGAIDTIIEYGRAVSDAEFLEREQAVKGS DLATIVYTSGSTGTPKGVELTHANFVFITYSGVNSMPDIAMKPNRRLLLFLPLAHVFARY MQFFCFAGNVSLGLSSNLKTILADFKAFKPTFILAVPRIFEKIYNAASQKAGAGFKGRVF ADATQTAYDWSHAQQSGGSIPLALNAKHALYNKLVYSSIMEVFGGHVEYAVSGGAPLDSS IAHFFNGVGLPLLEGYGMTETCAPSSVNPTEGYKIGTIGLPLQGVTMGVDEEGELCIKSP AVCAGYHNNPDVTKQQIVDGWLHTGDLGSIDDDGFVSIVGRKKDLIITAGGKNVSPCEME ASIMTSPVVSQCVMIGDRKPFIAAIISLDLAETNLWLESKGAEQVADLDEASKNPIVRAE VERAVNKANELASRAESIRKFEIVPDEFTEENGLVTPSMKARRQAVVEHYRTLIDKVIYV PRKPEAHAE >gi|148337404|gb|DS264455.1| GENE 97 102834 - 103415 19 193 aa, chain - ## HITS:1 COG:Rv2891 KEGG:ns NR:ns ## COG: Rv2891 COG0739 # Protein_GI_number: 15610028 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Mycobacterium tuberculosis H37Rv # 57 193 39 177 249 80 35.0 2e-15 MSDDIDKRNRHRCAAAMAVCVLANIAFTICCAQPTASAYAQSADDVAHEVAQAACRTSMQ WPLEHAQVIGEYDAPAKQWLPGHRGLDLRARPQDAIIAPADGVVAFSGKVAGKSVVTLRH GAETGSLTSTFEPAVTTRPVGAVIAKGERFARVEGGSEHCADGCLHWGLKSGGRDYADPS GRVRPMRVELKPL >gi|148337404|gb|DS264455.1| GENE 98 103569 - 104009 336 146 aa, chain + ## HITS:1 COG:no KEGG:BDP_1211 NR:ns ## KEGG: BDP_1211 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 18 146 5 133 133 186 80.0 3e-46 MPGVSRHDMPKRHRTWHTMGHMSDNTTQRKALQQLESEPSEERIAYYRKPFMVLWAAIQE ASSELQDDYTLSPELSQLWVGEQIRQVSDSLVDRLAEIAVAHGESKSNVARAANASPDNV IRRFPRLKADAAHDRTLIDDVLDSLE >gi|148337404|gb|DS264455.1| GENE 99 104339 - 105040 187 233 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|169795303|ref|YP_001713096.1| ABC transporter ATP-binding protein [Acinetobacter baumannii AYE] # 6 213 7 210 311 76 27 1e-12 MAYIEMKNSTKLYHMGSTTITANDNVSFTIEQGELAIILGASGAGKSTVLNILGGMDANT SGQVIIDGKDISNYTPKQLTAYRRTDIGFVFQFYNLVANLTARENVELASQIVPDAQDAR QALADVGLADRVDNFPAQLSGGEQQRVAIARAVAKNPKILLCDEPTGALDYNTGKQVLRI LQDMSRKKGATVVIVTHNSAIAPIADRVIRMHDGRVSSIEVNEHPMDIEELEW >gi|148337404|gb|DS264455.1| GENE 100 105147 - 106922 973 591 aa, chain + ## HITS:1 COG:Cgl0579_2 KEGG:ns NR:ns ## COG: Cgl0579_2 COG0063 # Protein_GI_number: 19551829 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 287 548 7 259 287 101 34.0 5e-21 MDVSDDADRLQTLLYSSYSADVVRQLERPLLDDGVPLMRMAASAVAHVTLSLLDDEDLDV EDARVTVLAGAGDNGGDGLYAGAELAREGAQVTAVAVGRSLHEDAFRAFVRAGGRVLVLD PAADISGCTSGFSAGEAGERLQAAVECARGAHVVLDAMTGIGVVGALRGVAGTLASSLGM DGVLPDKPALPNNDPSADLPLVVAVDAPSGVGVDDGSLPGPYIPADVTVTFGAMKPCAMV PPASYACGRITLVDFGFDVDDAVPFAEMTDGDFVADSVRLPSLADGKYSRGVVGLVTGSA RYPGAAVLSARAAACANVGMVRYLGPQRAQDMILSVLPEAVLGKGRVQSWVVGSGVPAEG DVASGDDMQRATIAALLDHYALEDGDGSRNERAEGMPPIVVDAGALDLLPCHVVPQVVIT PHAGELAALLNRLDADMADVVSRQWVEARPLRAALRAHELTGATVLLKGAVTIVVGADGD GNTRIILSGRAPAWMATAGSGDVLAGVLGALLAQQDDMLSDDPALVPEVAAAAAYMHGLA GAMASGSEQRGWHRPHLYGHAGKTPASAIGHPIVAGDVVAAVPRAFGELLR >gi|148337404|gb|DS264455.1| GENE 101 106938 - 109322 2795 794 aa, chain - ## HITS:1 COG:L111162 KEGG:ns NR:ns ## COG: L111162 COG0577 # Protein_GI_number: 15673086 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Lactococcus lactis # 151 794 247 896 896 509 40.0 1e-144 MWDLAAAAQLATAQAQLASANASVASGQTQLQAARTQLAQGQNQLSDSWNQLANGKTQLD AAREQLETSKTVLDKVGATLGKWEQTGITGKLYEQIRGKYDMAINQYNEACAEYNRQLNA YNAGLQQYQNAVARLDQGSQAYRSNADNLAQASKQIAEKQNELGKAVSQAGKQVADGVTQ LIQGQRDIDKAETEYQSKLAEFNAQKPEAERKISEAERQITLAEEKIDNLTVPAYSVSGR REGLTSQGYCVYMVIEGIVAKLAYIFPIFLYFVAALVTFSTMGRMVDEERTNSGTLKALG YGNADVMLKFTVYGFAASTLGTCIGVLAGHTLLPLIVAHAYSAGFTMPDIMLKFHPWITM AAFALAWISAVVPAWLAASKELREKPASLLLPKPPAKGSKILLEHFPPLWNRLNFTHKVT ARNIFRYKTRMFMTIFGVCGAVSLLTAGLAVQSSIGQIGNRQFEELIHYDLIVAEESDTN SAQREEIATTLKGKTVQSSTAVRYEELSKTAGKENDKQSITLLATDDAYNFNEYLTLRDR KTHQPQILVNNGAVISERLAEMLNVSVGDTFTVNDENGAQRTIKVAGISEMYIGHFIFMN AQCYEHVFGDQYSTNAYMVRLKDHSNANTERQGAKFMKLAAVRGVVQNTTQKNMVSTIVG SLNQIMEVLILVAVLLAVVILYDLTNLNVSERIRELSTIKVLGFHTSETTMYIYRETILL SLLGILAGYGFGEWLHRYIITEVPPDEVMFDPAISWIALAAPAIVVAGVLAVLGWIVYRQ LETVDMLEALKSVE >gi|148337404|gb|DS264455.1| GENE 102 109971 - 110606 716 211 aa, chain + ## HITS:1 COG:AGc1458 KEGG:ns NR:ns ## COG: AGc1458 COG1011 # Protein_GI_number: 15888140 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 53 211 50 203 203 86 34.0 4e-17 MTVAVPTITDVVFDFCGVLLDWRTRACLEGRFDDATVDRICADDDPCGFFGYEDRMDAGE DFDSIWPDVVAEQGERVAGIFRYYIAHYDDALPRMLPGMERLLRDLKAAGYGVWGLTNWS HETFHFAFEKFPQLAELLQGTVVSGVEKMHKPNADIYELAMSRFGLSPESSVFLDDTAKN VAGARSAGMHAFRFVDADQARRDLESLGVRV >gi|148337404|gb|DS264455.1| GENE 103 110768 - 111691 1400 307 aa, chain + ## HITS:1 COG:SPy0898 KEGG:ns NR:ns ## COG: SPy0898 COG0583 # Protein_GI_number: 15674920 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pyogenes M1 GAS # 1 294 1 294 301 309 50.0 3e-84 MTLLQLKYIVKIVECGSMNEASHELYVSQPALSSSVKELENELGIEIFTRSSQGIALTVD GAEFLTYARQVLDQASLLEERYKNAKPRKQLCSVSTQHYMFAVEAFVEMIDSTKSDEYEF TIRETRTKDIINQVANMLSEIGIIYLSDFNKDVIGKLLREKHLEFHPLFRAPLHVFISRD NPLAGKKKVTMDDLKPFPFIQYEQGEEGSFFFAEEAVWPEYSPKQINVTDRATILNFIIG LNGYTVCTGIDNGDLNNEKIVTVPLDTDETMLVGWITNERAKLSKAAETYLEKLKSVVAS HGYTLID >gi|148337404|gb|DS264455.1| GENE 104 111811 - 112506 1104 231 aa, chain - ## HITS:1 COG:CAC0027 KEGG:ns NR:ns ## COG: CAC0027 COG0461 # Protein_GI_number: 15893325 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 7 230 6 222 224 183 42.0 2e-46 MTASLDHRFTEFLLESQALKFGEFTLKSGRKSPYFINAGAFNDGRKIARLGAFYAEKIVE EIEAGNLPKDIDTVFGPAYKGIPLGVSTAIALTSAHGMEVGYTFDRKEKKDHGDGGMMVG TQLADGMKVLLVDDVMTAGTAVREVIPKLKAEANVEVIGLVLSVDRMEKTKDSDTSAVKA VEAEFGFPVFAIANVKEIFEAGQHIQNADGTPYVTPEIKAAADAYLEQYGA >gi|148337404|gb|DS264455.1| GENE 105 112543 - 113490 1283 315 aa, chain - ## HITS:1 COG:aq_046 KEGG:ns NR:ns ## COG: aq_046 COG0167 # Protein_GI_number: 15605646 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Aquifex aeolicus # 20 301 6 290 306 246 45.0 4e-65 MTAEQHANLYEQHEWKHPTQVAGIPWKNPVATASGTFQYAAVRWFYDVSQLGAVTTKGVS PVPWEGNPGIRTAEGPSSNINAVGLQNPGVDHYLEDDLPKLKAINATVIANVAGHCDDDY AEVVSKLDDSPADMLEINVSCPNVSAGGMSVGTDPVALSRLITRLRKLTDKKMIVKLTPN VTDITVPARAAVESGADALSLINTLLGMRINIRTGEPVITHVTGGVSGPAVLPVGLAAVW RVRAALPEIPIIGIGGIDSGETALEYLYAGANAVEVGAAALFEPTAPLRVARELDDLLDE RPELADKLAKGETWR >gi|148337404|gb|DS264455.1| GENE 106 113493 - 114311 920 272 aa, chain - ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 23 268 4 242 246 137 32.0 2e-32 MTAAATFMPTVGQAREAGFFPSRHTVEIVDNRMLADGVYRLTFRDEFIAGHAKPAQFVDV YSNNPSRLMPRPFGVAEVDGDEVSLIFAVVGKGTAEFSELRAGDTIRVMGPLGNSFNTKE NANYVLVAGGLGVPPLVRAAQAIAESEGSTSTAVFGYRNVRFGDGYVGRYADKTYSIDES EGNVVTLLDRIENELVNGELKPVVLSCGPLPMMKAVAAWAAKRGIEAQLSLEQRMGCGYG TCVLCTVDTAEGRLKVCSDGPVFTREQLGWGE >gi|148337404|gb|DS264455.1| GENE 107 114351 - 115313 1276 320 aa, chain - ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 1 319 3 286 286 206 38.0 3e-53 MDRLIEAIEDKQNPSVVGLDPTEALVPKQVVASFAEEIAEQVEDPTEAPAAQLSVAFFEF NRAIIDAVADIVPAVKPQIAMYEALGPAGIDAYSMTCEYAKQQGLYVLGDVKRGDIGSTA AAYAHHLSGVNAGERAFDPWHEDAVTVNPYLGTDGITPFVEAATGADKDIFVLVRTSNPS SSELQELELASGERVYEHIAGLVEGWGAETIGANGYSRVGAVVGATHPEEGKALRARMPH TFFLVPGYGAQGGTAQGVAGMFDKDGMGALVNSSRGIIGAWKKSGKYSESMSADDALDLV AESAREAAKDMRDNLRAVLP >gi|148337404|gb|DS264455.1| GENE 108 115313 - 116731 1639 472 aa, chain - ## HITS:1 COG:aq_806 KEGG:ns NR:ns ## COG: aq_806 COG0044 # Protein_GI_number: 15606174 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Aquifex aeolicus # 29 465 46 420 422 219 33.0 7e-57 MTLTLHDIKVWNTGEVIDLVVPSDTDASVDASAMTIAPGFEDPHVHFRDPGQTYKESMIS GCAAAASGGYTNVLIMPNTVPAMDGVKVEAGQPGASEVLDAEYDTVIDYLQHYEAAHGVK LPVRYDLCVCASKGRAGHEATEVADWIGYLPEHGDEHKDAYQLAHPVTAISDDGSAVTPS ILEQVFENVKESGLYLIEHCEHHDTGAVNDGPVSRKLGVPGIPEDTELKIVERDIDMSRK TGVHVHFQHVSTAISFDAIRKAKAEGLPITCETAPHYIALNDEALLKYGTLAKMNPPLRS EADRQATIAAVADGTVDLLATDHAPHTMEEKELGFLDAPNGIIGLECAYGVCHKVLVDGG FISDERLIELMSTGPAELMGHDKTDITAVLDDYADAVPGDDDTKRVLDLGRVPESDQVDL VVLNTGEEWTVDPEKFHSSARNTPFGGWQVTGRPLATIIGSKLAFSRIDKED >gi|148337404|gb|DS264455.1| GENE 109 116736 - 117155 648 139 aa, chain - ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 135 2 136 146 112 46.0 2e-25 MEVTSIQNGIIIDHVPAGTALKVLEYLKIDPSKTKLALIMNTDSHMYGTKDIIKIEDETE SIDLDVLGLVARTATVGIVRGGKIVEKKKPTLPEHVVNIIKCVNPRCVTTTEPAVQMFHL VHSDRQEYRCDYCDEEAKF >gi|148337404|gb|DS264455.1| GENE 110 117155 - 118117 1196 320 aa, chain - ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 3 304 4 305 307 372 59.0 1e-103 MVGKSVITLDDLSIRQIQEMLHKAQYIDSHRKEVAHTCEGRVLATLFYEPSTRTRLSFET AMLRLGGKVIGFAGAQLASVTKGETIADTLKTVSNYVDVVAIRHPKEGAALVASRAASVP VINAGDGGHMHPTQTLADLATLQSRFGRVTNLTVGLCGDLTFGRTVHSLIETLCRFGNVN FVLISPDELKTPQYVLDRINATESCSYTEVKDLVSVIGDLDVLYMTRVQKERFFNEDDYL RLRDTYILDEAKMAYAKKDMAVLHPLPRVNEIAVEVDDDPRAAYFEQVKNGMLMRMALES SVVGDELPGYEPLAAKEVEA >gi|148337404|gb|DS264455.1| GENE 111 118277 - 121378 3396 1033 aa, chain - ## HITS:1 COG:ML1630 KEGG:ns NR:ns ## COG: ML1630 COG1391 # Protein_GI_number: 15827859 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Mycobacterium leprae # 44 1029 52 1002 1004 589 38.0 1e-167 MASSTHQFGVLDLIRAGLQDLDTARTLLDELRADGIDDDRLCLLMKTLEQTCEPDIALRN LVDIIKALQSQGRDFHQVITDDAGLVRLVTVLGVSDEMGKLMRFRPELVMAAASDSCESH LYNHAQRRAHVLEAVGADPVDSRTPKASKPLAEAATALRQTYRKQLAAIMAQDTTAEDPI EIQPRISQELSDLADAALEGALAIARNEVDGSEHVRFAIIGMGKLGARELNYVSDVDLIY VVEPADADTNGMTLNRVGTKMATTLQRVCQSVIMGVAEPTLWQIDGGLRPEGKDGPLVRK LESHEAYYEQWAENWEFQALLKARPVAGDPDLGQAYMDMTRPFVWAASKRDNFVYDCQQM RKRVEDLIPAPLKDREIKLGRGGLRDVEFTVQMLQLVHGRADETLRTSSTLESLQRLAEG GYVSRRQAKKLSWDYRFERVMEHRQQMWALKRTHLFPDLGKASLGGIERKRDTNDDELNH NLELRRLARAFHMHPEELVDKYDETRREVRHLHMDIYYRPMLPINAGLDDEQVELSANAM QERFASIGFADPDAAMRHVTALTAGISRAAKINRILLPAALQWLGEGQNPDMGLLNWRKL EEHFGTDSEYLGFLRDSPSAAQRLCHILSNSRFLGDALNKSVESVTWLGSDNDLQPRSRE SLDVQTHASLERNAGSINDFANSIRAMRRHEIERIGLGWMSGVIDDKASLAGMTDVYDAA IDASLTWAIRHQTQEMGLDEAPAAIAVIGMGRYGGREVNFSSDADVIIIYRPSDNADDNQ ANLFARKVQEDLRAILQGPTTLEPKIELDMDLRPEGKNGPLVRSYASCEEYYRSWASTWE HQALLRARYAAGDAALAEDFLMNVADPLRYPKIDLTEAQVAEIRKLKARMEAERLPRGVR RDRHLKLGKGGLSDVEWTIQLLQLQHAGDNANLRVNGTMQALDELERRKLVSAGDAVVLR RAWWMCTAARNGSYLWSGRVNQADILPDDTYSLGGLAVYLGYDANRGQHFENDLLAVMRK ARDVTERLFYGLS >gi|148337404|gb|DS264455.1| GENE 112 121480 - 122319 958 279 aa, chain - ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 6 275 4 273 282 239 43.0 5e-63 MHSPIFSLEVFPPKRTSPVGTIYDTLDGLQGLDPDFISVTYGTGKSSDRTLTARIAHTVN EYGIPAVAHLTAQYLDKDDVNEALDLFDQAKVSGVLALRGDRVEGAEPAGVFDHASDLAA YIREKRPNLKIYGACYPEKHPQAATLEEDIDNLKKKVDAGVSHLISQLFYDNEDFLRFVD KARAAGIDVPIEAGIMPVMNAKSVLRMSKMCESRVPEKLAVLLDKWGSDTALLKEAGIAY ASEQICDLAARGVDGVHLYTMNHPCVSRRIWSNVKPFFV >gi|148337404|gb|DS264455.1| GENE 113 122362 - 124668 3403 768 aa, chain - ## HITS:1 COG:SP0585 KEGG:ns NR:ns ## COG: SP0585 COG0620 # Protein_GI_number: 15900494 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Streptococcus pneumoniae TIGR4 # 5 766 3 749 749 856 58.0 0 MSALTSVSGFPRIGQNRELKKIIEAYWKGNTTLDEVRATAKELRAKHWKLQQAAGIDLIP SNDFSYYDQMLDTAILLNVIPQRYQRLAFENPEETLFAMGRGYQGEKGDVTALPMKKWFT TNYHYLVPEIDSATDIKLNSTKPFDEFNEAKALGITTKPVLIGPYTFFKLARNPQAEELD YDKGLVNAVAAVYAEVVAKFAELGAQWIQIDEPYLVLDKEPGDVELFKSLYAKILPAREG KVKVLLNTYFGHIADVYETVNLLGFDGIGLDLNEGKDENLAAVEKYGVAENTTIFAGVIN GRNIWRNNYAVSLGLVDALKQVTANVAVSTASSLLHVPFSTEGEDGLADDVRKHFAFAVQ KLDELHEVAVLADASDDEKKASAELAANQALFDGTRVAADPAVAKRIASLTDADFVRQPA RAERQKEQREALNLPLLPTTTIGSFPQTKEVRAERAKLRKGEITKAEYDEFMKNQIDACI KHQEEIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRA NPITVEWSAYAQSRTDHVMKGMLTGPVTILNWSWPREDITHEQQTQQLALAIRDEVLDLE KAGIKVIQIDEAALREKLPLRKTDWHKKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFN DIIKDIDAMDADVISFEASRGDLVVLDAIHDANFETEAGPGVYDIHSPRIPSEQEIEDRI YEILKKMDVEKVWINPDCGLKTRGNAETWPSLENLVAAAKAVRAKLAK >gi|148337404|gb|DS264455.1| GENE 114 124850 - 125254 392 134 aa, chain - ## HITS:1 COG:MA0416 KEGG:ns NR:ns ## COG: MA0416 COG1917 # Protein_GI_number: 20089309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 7 133 13 140 141 108 48.0 3e-24 MNNPSAFPLGEPNDGFAQYFDGQSWLAPVLDAPEVSIHNVTFEPGCRNHWHIHHHAAQIL IAVGERGYYQLEGEEPKELEPGQAVRIPPDVKHWHGAAPHEAFSHLAFMIADGTGDVTNE WLEPVDPDAYETLR >gi|148337404|gb|DS264455.1| GENE 115 125385 - 126029 907 214 aa, chain - ## HITS:1 COG:SMc00468 KEGG:ns NR:ns ## COG: SMc00468 COG2062 # Protein_GI_number: 15965558 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Sinorhizobium meliloti # 45 187 9 147 178 67 30.0 2e-11 MPCPSGKSETMDIRHLKCGAGTGSERAIMGTSLKKVAKKAKEYKYVLLAMRHAKTEPFGG NGSDVGRELTDKGRKQAKAVAKGLAAFKMVPTRIACSSATRARQTCDRMLKVFGDDPKVD YRQSLYEGGVQSVFDELAQTKEKHRTLLVLGHEPTISIACQWLASTESDPTLLDLLNLGM SPASIAVFGSNEPFNQWQLHSGELIALLTAKDFE >gi|148337404|gb|DS264455.1| GENE 116 126044 - 127099 1040 351 aa, chain - ## HITS:1 COG:MT2178 KEGG:ns NR:ns ## COG: MT2178 COG2519 # Protein_GI_number: 15841610 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 4 292 5 264 280 234 44.0 2e-61 MRRGPLAAGEKVQFTDRRSNKITDQLVPGGVTQTSHGIILHDDVIGQTEGSVVVTVSAKR EAQVNQTHPERDANKPWKGTRAIGGWEFAVMRPRLADYVLSMPRGAQIMYPKDIAQVIQL GDIRSGMNVLESGAGSGAMSINLLDAVGEGGSLTTIEMRSEFARVAEANATVYFGKRPAW WDLRTGDFDSVAAGLPEHSFDRIMLDMLDPWNRLEQAYRVIAPGGVLVAYVTTTTQLSRL AEALREAGCWTEPDIQETLERNWKAQGLAIRPDHQMIGHTGFLMVSRAMAPGFQALRKRD RATKDTTTDIDSLTPEERAEQLEDLELRDISDRKLRKVLRDLDAQVEAIKE >gi|148337404|gb|DS264455.1| GENE 117 127260 - 128111 975 283 aa, chain - ## HITS:1 COG:MT3126 KEGG:ns NR:ns ## COG: MT3126 COG1119 # Protein_GI_number: 15842605 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA # Organism: Mycobacterium tuberculosis CDC1551 # 3 276 17 270 287 184 37.0 2e-46 MNEQNIALKLDDVEFRRRRRVILTKVNLEVKKGEKWVLFGPNGIGKSTLVQMMSTRGFPS EGTVDILGNRLGKVNVFSYRNRIGLSSAELGRAFPPQEDPLDAIVTALTATTGRWRDTYT DEDYAKARSLMREFGIEYLEGKMMFKLSEGERTRVLICRALMADPDLLILDEPTTGLDLG GREIALRALSRVGAEQSDRAVILVTHRLEEIPQGFDHVAIMGRITGNEADAYADNVAGND PAPGTIVYTGDLEHGFTSERLSQVFGLDLKVTHANGRWNAYAV >gi|148337404|gb|DS264455.1| GENE 118 128248 - 129666 1450 472 aa, chain - ## HITS:1 COG:Cgl1093 KEGG:ns NR:ns ## COG: Cgl1093 COG0438 # Protein_GI_number: 19552343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 64 468 1 385 385 373 48.0 1e-103 MRYLTSTNRKGYARMLFHRFSEKEWNFLKNDENNECFSCLMFYSRTGNAGRLEEEITDMK VDILSREYPPKVYGGAGVHAEELSKVLAERVDVTVRAFDGPRTAADIPAIPGTDPKGSLT VVGYDVPKELEDANGALKTFGVDLQIANDVDADIIHAHTWYACLAGYLAKMLHDTPLVIT AHSLEPFRPWKREQLGGGYNLSSWAEKDAYEHADRVIAVSAGMREDILTAYPNLDPDKVV VVHNGITMSQFETPADDDSGWKVFERYNIDRSKPTLLFVGRITRQKGLPYLLQALHFVDP NIQVVLCAGAPDTPEIMEEVKTAFAKLDEERGNIIWIEEMLPKPELNALEHGCDAFICPS IYEPLGIVNLEAMACGLPVVASATGGIPEVVVDGETGYLVPVDQLHDGTGTPTNPDKFVH DMADAINRIMADPEKAKRMGQAGYERARDHFSWESIADKTVKVYEDVLAERK >gi|148337404|gb|DS264455.1| GENE 119 129740 - 130201 386 153 aa, chain - ## HITS:1 COG:no KEGG:BAD_0750 NR:ns ## KEGG: BAD_0750 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 153 1 153 153 295 98.0 4e-79 MPNRAERRAQAKRNRRGVPQQYDQTQGRARSGMLDEYQLQEKSRRLQDGTDGPWKPSAST ITETENVLNTNPDYKNPKMFKAPHSVRQWFRVASWVLIALSAIAFLVVMWLPSHPMWLIS TVAIVFAVGVLSLFFTAGNPKHNPNLDQNGTAV >gi|148337404|gb|DS264455.1| GENE 120 130323 - 131870 1767 515 aa, chain - ## HITS:1 COG:VC2374 KEGG:ns NR:ns ## COG: VC2374 COG0493 # Protein_GI_number: 15642371 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Vibrio cholerae # 1 502 1 480 489 479 49.0 1e-135 MGDPRGFLKVRTRRELAERPVEERIKDWFDVHTESGLQSWTTEQAARCMDCGTPFCMSGC PLGNIIPEFNDLVRQEKWEDAYNRLSETNNFPEVTGRICPALCEAACVLGIHQPATMIQN DERTIIDQAWSLDYVKPLPPQRLTDQTVAVVGSGPSGLACAQQLTRAGHTVVVYERDDAI GGLMRYGIPNFKLDKRLIDRRVEQMEAEGTVFRTGAEIGKDISWDDLRSRYDAVVVAIGS TVPRDMKIPGRDLKGIHFAMEFLPDATRRVYGVKPVNDITAEGKHVVIIGGGDTGSDCLG TSLRQGAKDVTVLQIMPQEPKERPANQPWPTFARLYKETSSMEEGFETQRAEYVYNTDSV NFEGSDEDKAKVKVENSTATEGFVADENGHVTGLKVVNVAPGENGPFTRQPGTERVIPAD LVLISVGFLHPDTTTLVDQLPVDLDGRGNVARNDKFATSQDGVFACGDAGRGQSLVVWAI SEGRSCAAAVDEYLTGSTELPAPIVASKRPMMLPR >gi|148337404|gb|DS264455.1| GENE 121 131872 - 136443 6014 1523 aa, chain - ## HITS:1 COG:ML0061_2 KEGG:ns NR:ns ## COG: ML0061_2 COG0069 # Protein_GI_number: 15826907 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Mycobacterium leprae # 397 1192 8 812 812 967 60.0 0 MTFHAPLDLTIHDSQGMYDPGAEHDACGVGMVTTLNKRPERKIVDDAIEVLVNLNHRGAV GAEENTGDGAGILMSMPDEFMRATAGVELPEEGHYAAGIAFLDRDIATSGQQEQAISKIV REEGLEVLAWRVVPTNPDGLGLQALASMPAFKTLVVADPEGELGGIELDRKTFRIRKRVE HEVGIYFASLSARTITYKGMLTTMQLKPFFLDLSDERMKAKIAIVHSRFSTNTFPSWPLA QPFRQLAHNGEINTIQGNRNWLSAREGRLSSELLGEFKPLLPIATSGYSDSGTFDECLEL LHLAGRSMPHAISMMLPPAWENNDQLDPDVKAFYEYNNTLIEPWDGPAHIIFTDGTQVGA LLDRNGFRPGRWQVTDDGYVVLASETGVLPEVAEEHIVTKGRLEPGKMFLVDTDEGRIIP DEEIKKTLASQHPYRKWVEGNSVELSQLPKREHVNHSGQSVQRRQRAFGYTEEDLKLLLA PMANTGKEPLGSMGNDTPLAALSKHSRMLFDYFTQKFAQVTNPPLDWEREKIVTSLESAI GPEPNLLADSELHAKKILIPLPVLNSDEMAQLKRLDRAKILGGYYKPFIVKGLYQVAGGG QALKDRLDEIFQEIDEAIENGANFLVLSDRDSNYAWGPIPSLLLTSAVQHHLLRRHTRTQ ISMVVEAGDVREIHHVALLIAYGAAAVNPYLAFESVEDLSRKGYLKVDAETAVKNLTRAL STGVLKIMAKMGVSTIMSYRGAQLFEAVGLNKDVIDEYFTGTTSRVGGVGLDELAEEVAS RHRVAYPTQWTARPHRNLRTGGDYKWRRTGEDHLNDPEAIFLLQQSTQRGDYNLFKKYSN HINDTSNRLMTLRGLMKFKSTRKPIDISEVEPASEIVKRFSTGAMSYGSISQEAHETLAI AMNTIGARSNSGEGGESEDRINDPLRYSKIKQIASARFGVTSDYLVHATDLQIKLAQGAK PGEGGHLPGAKVPPWIAKVRHATPGVELISPPPHHDIYSIEDLKQLINDAKMANPKARIH VKLVSEFGVGTIAAGVAKCHADVVLISGYDGGTGAAPLNAIKHAGTPWEIGLSETQQTLV LNGLRSRITVQCDGELKTGRDVVIAALLGAEEFGFATAALIVEGCVMMRACQKNTCPQGI ATQDPELRARFKGKPEHVVNFFMFIAEEVRELLAQLGFRTLEEAVGHVECLDQDEAIKRW KSDGIDLSNVLMQPGPVPGTILHKTIDQNHELDKALDNKLIELAQPALDKKEPVRIEMPI RNVYRTLGTMLGYEITKRYGEEGLPDDTIGMTFHGAGGQSIGAFIPRGETIRVYGEVNDY AGKGLSGGRMVVRPEDGITFDPHENVIAGNVTGFGATSGQMFVAGRAGERFAVRNGGATF VVEGVGDHGCEYMTGGTVVILGSTGRNLGAGFSGGNVYVLDLDMKQVNPAAATNGALLFE PLDADADKLVHGLVKQHAEETGSAFAKALLDDWENSAKRFTHIVPKHFLAMQKAMKEAEE KNIDFNTPGVWEQVYEQVMEGAR >gi|148337404|gb|DS264455.1| GENE 122 136655 - 137818 850 387 aa, chain - ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 3 383 21 389 390 284 42.0 2e-76 MTFEIYIHVPFCLRRCGYCDFNTYTAVDMGAGASRGNYANMVIREMAIVRDWQTTHGINE PKVATVFFGGGTPTTLKASDLVAMLDAVRATWGIADDAEITTEANPDTVNADYVKELADG GFNRISFGMQSAVPHVLATLDRTHTPENVAAGIAAANAAGMRSSVDLIYGAPGESLDDWH TSVRTAIDLGVNHISAYALTIAPNTKMGRRIAAGTLSRPDDDDEANKYEIADTMFTEAGL EWYEISNWARPGYESQHNLGYWRNVDWAGLGPGAHSHYGDCEDGKGLRSWDIAHPRLWGT AINEGNVPWAGSERITADEDIEETIMLGLRIREGLDTRQFSHLIPEQKWIELEHDGLITM LDGRAIPTLRGRLLNDTIITELLETLD >gi|148337404|gb|DS264455.1| GENE 123 137826 - 139706 2343 626 aa, chain - ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 10 610 46 649 653 870 69.0 0 MGQQHNQPGYTDQSLIRNFCIIAHIDHGKSTVADRILQLSGIVPEREMRDRFLDRMDIEQ ERGITIKSQAVRVPWTVDGTEYTLGMIDTPGHVDFTYEVSRALAACEGAVLLVDATQGIE AQTLSNLYMAIDHDLAIIPVLNKIDLPSAEPDKHAEEIAGLIGCDPSDVLRVSGKTGEGV AELLDRIVAEVPAPAGNPDAPARALIFDSVYDSYRGIVTYIRMVDGELKSREKLHMMGIG MTHDPIEIGVISPDMMPTKALGAGEVGYVITGAKDVSQSKVGDTITSAINPATEPLEGYR DPQPMVYAGLFPIDNAQYPELREALDKLKLNDAALIYEPETSVALGFGFRCGFLGLLHME IVTERLSREFDLDLISTAPNVPYEVTAEDNSVHRVTNPSEFPEGKIKKIVEPMVAADIIT PKDFIGAVMDLCQDHRGQMGTMEYISADRVEMHYRIPLAEIVFDFFDQLKSRTKGYASLD YHEDGEQSADLVKVDILIQGEKVDAFSAIVHRDKAYSYGVMMTKKLRELIPRQQFEIPIQ AAIGSRIIARETIRALRKDVLAKCYGGDISRKRKLLEKQKAGKKRMKMLGHVEVPQEAFI AALSTGEAGNDRDTKDKIRAAQKSEG >gi|148337404|gb|DS264455.1| GENE 124 139863 - 140123 403 86 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119025763|ref|YP_909608.1| 30S ribosomal protein S20 [Bifidobacterium adolescentis ATCC 15703] # 1 86 1 86 86 159 98 9e-38 MANIKSQKKRVLTNEKAHKRNVAVKSSLKTAVRATREAIAAGDKAAAEAAYKVAAQKLDK AAGAGVIHKNQAANRKSGLAVAINAL >gi|148337404|gb|DS264455.1| GENE 125 140212 - 140952 972 246 aa, chain - ## HITS:1 COG:PAE2348 KEGG:ns NR:ns ## COG: PAE2348 COG2860 # Protein_GI_number: 18313279 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Pyrobaculum aerophilum # 14 165 10 166 211 86 36.0 5e-17 MEVALESNGFFIGIEYLATFCCGMVGGLAAVRKGYDIFAILVTTWLTALGGGIIRDVLLG ALPPAGVSDKGLVITALLAAVAVAIIYPEVDKLKWSMLSLDALALGLYAVNGTSKAMMYH MSGTTAVFLGMFTALGGGLIRDMLINEVPMVIRDKHWYAVPSAVGCVLTVLVCKGVNEGI VSFPAEVLLDVLIVVLMVAMRLISVFFDIQLPGALARHNTYLPSEAKYLKRPVIHPDRND DDIKRK >gi|148337404|gb|DS264455.1| GENE 126 141146 - 142273 1556 375 aa, chain - ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 19 371 5 357 362 377 51.0 1e-104 MTEQNHHDPAELDKLAEKFTVLPNDNPASDAKRAELIDKPAFGQVFSDNMAHMTWTKGEG WSDRRIEPYAPLKMDPGASVLHYAQECFEGLKAYRHADGSTWLFRPDANAERFQNSAKRL YLPELPIDDFIGSVAALVKRDVNWVPSRREYTLYMRPFMFASEPFLGVRAPQEVDYCVIA SPSGPYFPGGVKPVSIWVEDKWFRTGPGGTGFAKCGGNYAASLLGEYTGIDHGCQQVCFV DAATKTYLEELGGMNMMVVHKDGHVETPSLTGNILPGVTRRSLIQLIQDNGHDVVETMIA LDQLLEDIKSGEVTEVFACGTAAIITPIGRFKSEKFDVTVADGGSGEFTLALRNQLLGIQ LGEIEDPHNWMWKVC >gi|148337404|gb|DS264455.1| GENE 127 142523 - 143137 991 204 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025760|ref|YP_909605.1| 50S ribosomal protein L25 [Bifidobacterium adolescentis ATCC 15703] # 1 204 1 204 204 386 97 1e-106 MIMATTITLEGAARTEFGKGAARRMRVANLIPATVYAGGEDPVFVQLPMKETTLSLRHTN ALFTIKYGDETKMAVVKDVQRNPVKRIVEHVDFYEVKAGEKIDVEVPVFVEGTPKGAAVA FVDIQELKVRADVANLPEKIVVNVDGLTDGSKVFAKDVVLPEGVVLDIEDPEESVVTVEV PEDAAPEEVAPAADAAAAPAADAE >gi|148337404|gb|DS264455.1| GENE 128 143392 - 144393 861 333 aa, chain + ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 84 327 78 315 320 167 38.0 3e-41 MATTHDHSALIRNIQLATGVTTVAATGLLAASAHMLFRFAIDTQWKHSIFHQALIAPDRE GKMNQGEAKEAEQWFSETKQPVSITSRDGLKLHGWLFDPDCIDPTPHIYAICVHGYTGAP EEQAKWAHRYARMGFTVLAPSQRAQDLSEGRYVGMGWLERNDLLDWIRLIVDSDDQARIL LFGGSMGATTVMMTTGTPELPRNVIAAIAESGYTSARMEFIDSARGMFHMPKLLASACVD AAGLICKRRAGYDFTEASCIPSLRHTVIPMLFIHGGKDRMVSPRFLDMNYNACSSIDRER LLVPDADHMESSAVDPKRYWDTVYGFIRRSFKI >gi|148337404|gb|DS264455.1| GENE 129 144497 - 144910 427 137 aa, chain - ## HITS:1 COG:CAP0110 KEGG:ns NR:ns ## COG: CAP0110 COG0454 # Protein_GI_number: 15004813 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Clostridium acetobutylicum # 1 132 1 132 137 208 70.0 2e-54 MVITYTDEKKFTKEQTQRLFLSVGWVSGQYPERLHKALMGSSTVFSAWDGERLVGLVRVL DDTEMVAYMHYVLVDPEYQGRGIAGHLVGMVKQRYHDYLYIEVMPEESKNATFYEKHGFH IMEDGVAMQICNPGERH >gi|148337404|gb|DS264455.1| GENE 130 144934 - 147486 1639 850 aa, chain + ## HITS:1 COG:BH0714 KEGG:ns NR:ns ## COG: BH0714 COG0178 # Protein_GI_number: 15613277 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 22 845 5 818 820 443 32.0 1e-124 MKPSPSIFAYETQVSRPLPSCIEVRGAHVHNLKDVDIDIPLNSMVGIAGISGSGKSSLAL GVLYAEGSRRYLEALSTYTRRRMTQASRATVDEVRHIPAALALHQRPSVPGVRSTFGTMS ELLNSLRLLFSRIGSHVCEHCGARNQPTMNVAAELPMHCTFCGGLMHPPSAEDLAFNAAG ACPTCSGTGIMREVDRSALVPDESKSIDEGAVLPWGSLMWDLMKQVCGAMGVRTNVPFNQ LTEQERDIVFAGPAIKKHILYKPKKGDDFAELDFTYYNAVYTVENALTKAKDEKGLKRVA RFLKERPCSDCGGTRLSERARQPRIRDINLAQATAMSLDALVSWVGSVPESLEPHMHTMA SAICESFLNTSRRLLELGLGYLSLDRAGATLSTGERQRVQLARAVRNRTTGVLYVLDEPS IGLHPANVDGLLGVMRDLVADGNSVVVVDHDTRVLAETDYLIEMGPGAGAKGGQVIAQGT VPQVIDTRESRIAPFLAQGGNVHDRVRDNIDAHEIFSAGRIHMETDRLHTVGPLSVDIPR GRLTAVTGVSGSGKTTMVLEMLMPALQSRIDRSPQPTQVRLLEADGVSKAHLIDATPIGA NIRSTVATYCGVHDDLRRAFAKTDAARTIGLKAGAFSYNTGKLRCATCDGTGSISLDVQF LPDVDIECPACHGSRYSDAIAELKLPCTDGVAYSMPQLMTMTVDDAMPVLRDVKPIQTKL ATLHELGLGYLALGEPTPALSGGEAQRLKLASEMGRKQHDAVFVFDEPTIGLHPLDVRVL LHVFDELVANGATVVVIEHDLDVIANADYVVDMGPGGGEAGGRVVCEGAPSRIAACPESV TGRYLQSSQC >gi|148337404|gb|DS264455.1| GENE 131 147514 - 148182 265 222 aa, chain - ## HITS:1 COG:no KEGG:BAD_0739 NR:ns ## KEGG: BAD_0739 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 222 1 222 222 457 99.0 1e-127 MDFNVNDWLGDWISFEHLINNHDPNLDRAWKDSTKAMRSKPLFAIMMLGDARRFWAKACK TSGKEWRFRIGGWHIEQPSAVGDDDAVAGFNLTWLDEKRTPITTHEYRLDHVHDKGLEGK PCYVFHASDAGASDPFAVLIAMEPMPERSVLRHGGLLSHLHFQYASDEGELIKGTGKQAT LRHRMWYPTMCAAEGTLLDQCNIVRALHHLQAWRELPVPSSD >gi|148337404|gb|DS264455.1| GENE 132 148167 - 149153 268 328 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 128 321 21 225 245 107 36 4e-22 MVAIRRLHDMVSRLRADGMTIVIAEHRLAWCADLADRFIVFDHGTILGEYEASDFLAMSE QRVAALGLRALDDRPYRLAVHRKLQHGGIAPDEDKRQVVIGVRGLSVGHTKRGLLGRKTP VFARDIPDFDIHEGEILGLMGSNGVGKSTLARTLCGLAAPLNGMVLLNGTKASRGALTRA GFLVMQDVNYQLFSDSVREEALLGLDGMDDAVRDRCDAVLRDLDLLDSVQRHPMSLSGGQ KQRLAIACALMSDKRFIVLDEPTSGLDRLHMTQVVGLLRKLADRGKAVLVVTHDYELAAL WCDRIIALEDELHNEQGEEEDRLAWTSM >gi|148337404|gb|DS264455.1| GENE 133 149274 - 149573 69 99 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPDVKLLRDIMHALPNPRGRHARILAGECQLIGGISIEILRLRILEYAAHLSHIAFHRSQ SGADSARHMDALQIAGIETRYQTIEQTCVRGFATAALST >gi|148337404|gb|DS264455.1| GENE 134 149708 - 150394 256 228 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 1 201 1 202 226 103 35.0 3e-22 MALDPRTKLYLVALANLLLFFHVDVVVESLTVLLLLLPLLGAGRWAAAVRFGCIYVLLLV GTWASTLDDGGSWLHMLGLLCVGIRMMMPCLIAGIYAFTTTTASQFVCALRRMRIPETIV IPCVVCIRFFPTIHDDYHQIRDAMALRGIAQGTFALLRHPAQSLEYILMPLLMNATGVAQ DLSVAALTKGIGIRGPHTCHTEIRMHGIDWAWMVICTVPLALGIGGAW >gi|148337404|gb|DS264455.1| GENE 135 150394 - 151011 614 205 aa, chain - ## HITS:1 COG:no KEGG:BAD_0736 NR:ns ## KEGG: BAD_0736 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 205 3 207 207 335 99.0 9e-91 MTQQGMSTKSRHLTIPDLITIGVFTALYFVLVAVATLFSSVALMGFGMILLPAVAALICG CVYMLLVAKVGKFGAISVMGIVVGLFLFVSGHFILSLAASIVFPVIADAIARAGDYRSKT GILASYVVFCYGLTGPILPLWFMKDAYVASLQARGKDSSYIDGVFAHVNTGTFFIAMIVV LVCALLGGWFGQRMLKKHFAKTGII >gi|148337404|gb|DS264455.1| GENE 136 151192 - 151566 132 124 aa, chain - ## HITS:1 COG:PH1502 KEGG:ns NR:ns ## COG: PH1502 COG0239 # Protein_GI_number: 14591286 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Pyrococcus horikoshii # 1 122 1 120 123 69 39.0 2e-12 MNNAVIAVSVCLCGGLGAAARYVCDSVIKASWHKAFPLSTFVINSIAGFLAGVIAGLYSR RFLSDPAHVMLATGFLGGFSTFSTMMNESVTLLRGGRITVFVGYVLTSVVVPVMAAALGY CLVV >gi|148337404|gb|DS264455.1| GENE 137 151566 - 152099 313 177 aa, chain - ## HITS:1 COG:BS_yhdV KEGG:ns NR:ns ## COG: BS_yhdV COG0239 # Protein_GI_number: 16078026 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Bacillus subtilis # 41 167 7 127 131 60 30.0 2e-09 MAFSGCGIAILPCLSYWFGTSLERRYMARQHIIRVDLICVVFLGGCIGTALRYACSVIPD CGAFHIGTFAANMAACFVYAALSAWLGGTRRTVGRAKEYVNRGCGMGMCGGLSTMSTLAL EEFTMLHDGKAMDCAAYCCTTFIVGCLLAYVGAHVGLRFAGTEHNDGDRHAMGKEAD >gi|148337404|gb|DS264455.1| GENE 138 152253 - 153629 580 458 aa, chain - ## HITS:1 COG:BS_ywoD KEGG:ns NR:ns ## COG: BS_ywoD COG0477 # Protein_GI_number: 16080701 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 17 452 10 442 452 167 30.0 4e-41 MKTADKTRETPAFPKTFIMAMIFGVGLNPVNSTLISTALAPISHDLRIDAGRATLLISAL YLTCAIAQPTAGKLSEIIGPRSVFMAGAALVMIGGLLGGFAPNLGVLLTSRVLIGAGTSC GYPAAMLLVRRRADRMGLAEPPLLVLSILAMVGLVLIAVGPPLGGLLVTFLGWRSTFFVN VLVGIITIVLGLASIEPDAKHEHRMTVSFFIAHLDVMGLLLFSITISALLIVLMSLPTFD KVSGCVTVIALLAFVAWELHAATPFVDVRSLAADNAMTLNFLRAMLTMLGAYVVMYALPQ WLEDACHMNAGVSGMFIIPMGVVATVASLSIAKKPIVRLPLMVCCSAMVAVGMLLACTSS AGMVVLPLTASAVAGLVLGLSMSTSQTVLYRRAASEHIGTSSGLLRTSIYIGSIGASSLS GVFFGETVTDGGLHGIGITVAVLGVAALLATVMDRTLR >gi|148337404|gb|DS264455.1| GENE 139 153626 - 154102 303 158 aa, chain - ## HITS:1 COG:no KEGG:BAD_0732 NR:ns ## KEGG: BAD_0732 # Name: not_defined # Def: MarR family regulatory protein # Organism: B.adolescentis # Pathway: not_defined # 1 158 26 183 183 256 100.0 2e-67 MDTKDEYSTSDVAMELAIAVSRLQARMKHEAGIAERGITASQLAMLKRLDTEGELSVSTL AAYEHVSQQAITQRLELLRSTGYVTQHADSKDRRRRLVGLTDEGHAFLAHVTASQTTWLA HAIEYALDDGERGDLAAATTLIERIAATESLPTGGDTR >gi|148337404|gb|DS264455.1| GENE 140 154278 - 154685 552 135 aa, chain - ## HITS:1 COG:L178204 KEGG:ns NR:ns ## COG: L178204 COG1917 # Protein_GI_number: 15673516 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Lactococcus lactis # 1 134 6 133 133 102 44.0 2e-22 MENPSAFPMGEPNDGFAQYFVGQSYLAPVLETPQIAIHNVTFEPGCRNNWHIHHNAAQVL IAVGGCGYYQIEGQEPKELKAGQAVCIPADTKHWHGAAPGESCSHLAFMVPAGDPASMSN EWLEPVDAEAYGKLA >gi|148337404|gb|DS264455.1| GENE 141 154880 - 154975 131 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDMSYAPLGWSGIQVSKVCLGGMSFGKTSP >gi|148337404|gb|DS264455.1| GENE 142 155051 - 155449 455 132 aa, chain + ## HITS:1 COG:STM0421 KEGG:ns NR:ns ## COG: STM0421 COG0667 # Protein_GI_number: 16763801 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Salmonella typhimurium LT2 # 1 109 214 322 324 79 39.0 2e-15 MASGHLTHPSWDSDSKRGTTDGTMRNKYDQARAQDMPIIERVHGLAERLGVPMARIALAW HWAKDVTAPIVGCSKTERVDDVIEALGVKLSESDIAYLEEPYTAHELVGPLARPGERALA GTLAPTLKEKAK >gi|148337404|gb|DS264455.1| GENE 143 155473 - 156252 697 259 aa, chain - ## HITS:1 COG:BS_ydfL_1 KEGG:ns NR:ns ## COG: BS_ydfL_1 COG0789 # Protein_GI_number: 16077613 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 1 103 13 115 117 95 42.0 7e-20 MFNVSLGTLRHYERCGLLEPEYIDPRTGYRYYGAKQFEVLNTIRYLRVLDMPLTQIAEFL HNRDVHVIEDKLVAQKALIERKQHELEMVQRKIDHRLERLRDAEQSEFDVIRVVRQLACR IVWIRDSPKVDSYLGLEYSIRKLEQHQKDSLVFLGKVGVGIDKESLEQGGYADYGLVFLL LDDEDEYEGDTVALPETDCVRIRFRGSHGDAPDRYRELIWYTAEQGLDITGFSREIALID EGLTSDPAQFVTEICIPVR >gi|148337404|gb|DS264455.1| GENE 144 156330 - 157679 1610 449 aa, chain - ## HITS:1 COG:mlr1521 KEGG:ns NR:ns ## COG: mlr1521 COG0534 # Protein_GI_number: 13471523 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Mesorhizobium loti # 4 434 9 445 486 155 28.0 2e-37 MGKNLTTGSVFRTIVTFALPYLLSYFLQTLYGMADLFIAGQFIGIDGITAVANGSQVLYM LTVVIVGLAMGATVTIGRAVGANRLDRAAKAIGNVITLFAGIALALTVVLLLNVHNIISL IGVPVEAVEGTAQYLTICYIGIPFIVAYNIISSVFRGMGDSKSPMYFIAVACFCNIVFDY LFMGWLRLGPSGAALGTTLAQAISVTVTLVAIRRRRTGIRLKFGDLRPDRAMLRGILGIG VPTAVQDGCIQIAFIIITVIANYRGLNDAAAVGVVEKVISALFLVPSSMLATVSAVSAQN IGAGRMERATKTLRYATAITVVYGIVISIVVELTAGSIVGLFTTDATVILLGTQYIRSYI VDSIFAGIHFCFSGFFAACGRSYIGFIHNIVAITLVRVPGAYLASKLFPNTLFPMGVAAP AGSLLSVLICLGFYAWLKRHGVISEKARA >gi|148337404|gb|DS264455.1| GENE 145 157798 - 159165 1046 455 aa, chain - ## HITS:1 COG:no KEGG:BAD_0727 NR:ns ## KEGG: BAD_0727 # Name: not_defined # Def: putative riboflavin-specific deaminase # Organism: B.adolescentis # Pathway: not_defined # 1 455 3 457 457 868 100.0 0 MTVAVATPFNMDEQAFLQTMDRLIERFDRYSSGRCFADLDRIRLEHDMEGPLSLFDDVVH ELADDLFGGTSWPVNLDMDMIILDRFQIGYDAEFLTGCRNVVRKYGMSAWLYEMINDASV AVATHRPSNRMPFQLGLFDTREVFRRKKTKGKKSGGGRRKRLECMMEYLRQTYRLAAYTL LRWGGGEPRAADAALMVLAYGGLGMCMLRDDPKVVELGCDPDFRYRHVCAQLQDMRIKAD LEYACSVDLSVTSSLEYPACLDARYLYDAEHIVEAYRNLWDENTKPVAQLLAEIEDNGVY EVEDIWKDPLYLHDLAISLMGPSASGLLQEGFRLRDRTMFENGVKELDSQARNVRKAGLL LTLAGYIFFAEPEDRMDAMLASHKDRKRMLDNYEKLGEMAATIALYRLPRDRESLRAVRA LLMHETGVYADKMGELMGLADEPDGEDEATAPVMG >gi|148337404|gb|DS264455.1| GENE 146 159372 - 160817 2104 481 aa, chain - ## HITS:1 COG:mlr5184 KEGG:ns NR:ns ## COG: mlr5184 COG1282 # Protein_GI_number: 13474323 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Mesorhizobium loti # 18 476 8 463 465 347 46.0 3e-95 MGTLAEMLSTPLGVIEWFVYLLAAVMFVIGLHLMNSPKTARKGNMVSAIGMVFAVAMAFI VLFAGEASNGFKHGVAVIVLIVGIVIGAVAGVVSAKKVKMTDMPQLVSVFNTVGGGAAAL VALNDILTSAETPSIVVLITAGLGIMIGSVTFSGSLIAAGKLQGIKWVKKLSLPGKGFWN ILFVVLTIVSFVMLCVQPNQRLLWSILTTVFALCYGLVFVIPIGGADMPVVISVLNACTG TAVAMSGLAINNIALIVAGALVGAAGVTLSIAMSKAMNRPLLSVLAGGFGGSNSAAGAGE GLEGTMKETSADDLAVQLVYAEKVIFVPGFGLAQAQAQRELADLGTLLKDHGVEVSYAIH PVAGRMPGHMNVLLAEANVPYEELVDLDDINPQFPQANVALVVGANDVTNPAARKPGTPV SGMPILDVDKAQNVVVMKRGRGTGYAGIQNELYFEDNTQMLFGDAKASLQAVIAAVKELI N >gi|148337404|gb|DS264455.1| GENE 147 160818 - 161123 572 101 aa, chain - ## HITS:1 COG:Rv0156 KEGG:ns NR:ns ## COG: Rv0156 COG3288 # Protein_GI_number: 15607298 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Mycobacterium tuberculosis H37Rv # 7 92 9 96 110 82 52.0 2e-16 MDIVVAITLFVLALLIGVEVIGKVPATLHTPLMSGANSIHGIVIAGVVIVAAHATSPLAW VFIFLAAVLGTMNVVGGYVVTDRMLEMFKSDKGKKKEEEAK >gi|148337404|gb|DS264455.1| GENE 148 161128 - 162273 1507 381 aa, chain - ## HITS:1 COG:RC1334 KEGG:ns NR:ns ## COG: RC1334 COG3288 # Protein_GI_number: 15893257 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Rickettsia conorii # 14 358 6 352 374 247 41.0 3e-65 MAEKAEATVVFGVLNETSEHESRVALTPDIVTRLRKSGVTCLIESGAGVASHYVDEDYTK AGAQVVSADDVIARADALGFVDRPSNELLARVKQGTWIIGMLGSFTDADYVAAIEKAGLV GVAMEKLPRQLSSAQSMDEMTSQNSVMGYKAAIVAANAYGSFLPMMTTAAGTIRPAKVLI LGAGIAGLQAIGTAKRLGAVVTAYDVRPASKGEVESLGAKFLDLGLDFSKGQGEGGYARA LSAEEQAQQQAAVDQKAAGFDIVITTAKVPGRKPPVLLTKAGVAGLHRGAVIVDCAASDL GGNVEGSSVGTQVTDNGVTIIGAPYLASGVSTTASNLLSRNVADVLAHFVRDGKLAIDLN EELDNAMVVAGRGEEAKKEEE >gi|148337404|gb|DS264455.1| GENE 149 162509 - 164545 2686 678 aa, chain + ## HITS:1 COG:MT2242 KEGG:ns NR:ns ## COG: MT2242 COG1022 # Protein_GI_number: 15841677 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium tuberculosis CDC1551 # 106 667 31 594 603 412 41.0 1e-114 MSIITSLNKQATNLARKALRLGNDFVHPVSDDSGNTPDYNDPNSILSPDGHIELPHTAEW GPGYPSTTFLDPETGLLTTKTEGNPPLDEGTSIYDIYADRAARMGDEPLYTFKQDGDWHT KTANETLADIRAVAKGLLHYGLKKGDGVAFMCRTSYDWDVFDAAVMACGGVLATIYDTDS AEQIRNIVNNSDARLLVVETTDMKAKADGAETECPTLEHIVCFETGGLDEIKAYGSGVSD EALDARIDSVQKTDLCSIVYTSGSTAAPKGVEMTHEHYCATAFNLPDYMPELLHDKKNTV LLFLPQAHSFARAINYICVASNLHIYIAQGIKTLTADLQVAKPTIMIVVPRVLEKVYNAA SQKAGHGAKGVAFAAAVVAAQNYMKEVSTKGKTGTLTKARRAAFDPVVYASLREVLGGRA KWIVAGGAPLDPELLAFFRGAGVPVYEGYGLTETTAPCAFNVLGVPYHQGSVGIAFPGFE LRIAEDGEIQVKGASVFPKYHKNGEATEDSFTEDGWYKTGDLGRIDDDGFLYIIGRKKDL IITAGGKNVSPGPIEDVIKRCEFVSQALVLGDKRPFISALITLDEEALRPWLESKGLNRD MSMEEASSNAAVRAEVQKWVDQANEGVSRAESVRKFIILPEEFTQENGLMTASMKVIRPK VIKRYATLLNTQMYTKKK >gi|148337404|gb|DS264455.1| GENE 150 164738 - 165736 1274 332 aa, chain - ## HITS:1 COG:Cgl2233 KEGG:ns NR:ns ## COG: Cgl2233 COG1159 # Protein_GI_number: 19553483 # Func_class: R General function prediction only # Function: GTPase # Organism: Corynebacterium glutamicum # 14 332 2 305 305 261 46.0 9e-70 MTDADVTEPASQHSDAEAPVPYRSGFVAVVGRPNVGKSTLINALIGTQIAIASSRPETTR KAIRGILTTDNAQIVLVDTPGIHRPRTLLGQRLNDVVDESLSDVDAIAFLLPADQEIGPG DKRILSRLRSDFAVKRDDGTFKWKVPLIAIVTKIDELDRSALIDKLIEINEFADFTDIVP VSALEHDNLAEVRNVLVENMPEGPQMYPAEQITEERPEDTIAELIRGAFLEELDDELPHS LAVVVDSIEYPEDNDSGESYAGKAQVIVSIYVERDSQKPIIIGHNAEHLVRVKKKLRTAV NRIVGQKAKLDLHVKVAKGWQSDPKQLEKLGF >gi|148337404|gb|DS264455.1| GENE 151 165729 - 167147 1412 472 aa, chain - ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 16 448 10 430 435 211 34.0 2e-54 METTTITMIAILVVIALLLVWLSLSMAATEGAVGRVTRASLNNLILEIQTDTEASQFIRD KKIKRIHKVQRLIADRYATAGSCAFFRITCNVLDGVLVAAIASLCDAPLWAGLLVGFVFA LVVAVISLLVRPRSAGASKPVDLMLKHADAASVAVALTPFAKIGGQKDAKRHSNDLSDDE ELEKIQLEQGRATIDRLVEANDFDPEVSEMLRNVLTLSETLTREIMVPRTDMICIERGET LENMLKLCSRSGFSRIPVIGDDVDDLVGVAYLKDAVRATAFNPAAISRDVESIVRDPMLV PESKPVDDLFHQMQRTRQHVAIVVDEYGGIAGLVTIEDTIEQIVGELEDEHDRTQHADPE QIGENKWSMPARTPIADLEEIFEIDIDEDDVDTVYGLLTKLLGRVPIVGSTAVTRGLRLT AVDSAGRRKKVSTIVVEPAHVEGVDETEQHEDHTNGAEEASHDDKDSKDKHD >gi|148337404|gb|DS264455.1| GENE 152 167196 - 167741 718 181 aa, chain - ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 1 146 1 151 196 149 50.0 3e-36 MSVEVTNETAWQIDGKIFSDLGVWVMSQMRVSTQSDLTIMFVDPDPIAQLHMRWMNLEGP TDVMSFPMDELRPGDGGTEMEGVLGDIVLCPWVAAQQALAAGHSTMEEMMLLTIHGILHL LGYDHVTPEQERQMFGLQRQLLLTFFALRQGAGARATLPAGTPDALAEWDREHGAGGKTA K >gi|148337404|gb|DS264455.1| GENE 153 167742 - 168875 1253 377 aa, chain - ## HITS:1 COG:BS_phoH KEGG:ns NR:ns ## COG: BS_phoH COG1702 # Protein_GI_number: 16079588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Bacillus subtilis # 141 350 108 318 319 274 65.0 2e-73 MPTTTRTIAIPQQLDPVTVLGPVDEVLREVERAFPDLTIIVRGNRIAIMSHSSKSESQAA QAEQVVADIIQAAYTAPMDADTVRRMLDQNVLKNPVRATHPGHGRVVEELRMAGRQQSHA SHREETADRRRPHVPGVITFALGKPVRAKTAGQIAYVNAIESHTITFAIGPAGTGKTYLA VAKAVRAFQDRQVRRIILTRPAVEAGENLGFLPGTLNEKVDPYLRPLYDALSDMLGADQL KRYMDDGTIEVAPLAYMRGRTLNDAFVILDEAQNTTEQQMKMFLTRLGFNTKMVITGDVT QVDLTVPKSGLATIERILDGIDDIAFAHLKPEDVVRHALVGKIVAAYDRHTAIAGDHSRS ARAASSQPFDDKNKENA >gi|148337404|gb|DS264455.1| GENE 154 168920 - 169255 521 111 aa, chain - ## HITS:1 COG:aq_141 KEGG:ns NR:ns ## COG: aq_141 COG0537 # Protein_GI_number: 15605719 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Aquifex aeolicus # 1 109 1 116 121 123 49.0 1e-28 MSDKDCLFCKIIAGEIPSEKVYEDDATYAFKDINPKAKVHVLIVPRKHYANVAELAKEDP AQLAHMAEVAQKIADQEFHGAFRLIFNTGIDAGQTVFHVHAHVLTGEKLDE >gi|148337404|gb|DS264455.1| GENE 155 169350 - 170219 954 289 aa, chain - ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 60 282 26 235 241 114 32.0 2e-25 MMQILACRDRSDMGYVGFLIGSEAMTDALFLLDTDHDDVPVNSDELNAGWRLTLPSSVRR HAIQAMRLKDGDELQLSDGRGLRIHAVLRDAQQGIAEVLRFGKEPQPVTRLALVQALAKT GHDEQAIDMATQIGVDQVIPWQADRSIAKWKAGRTDKKWRQVLESATEQSRRSWTPQLDD CVTSKQVVAICKRACVHGDMVIVLHQDATKTWEQLETGIAKLSDTCLKDGRPRTIYVLVG PEGGISDAEVEAFTKAGAEVCVLGSNILRASTAGPVALSLLARALGRFV >gi|148337404|gb|DS264455.1| GENE 156 170424 - 171302 645 292 aa, chain + ## HITS:1 COG:Rv0881 KEGG:ns NR:ns ## COG: Rv0881 COG0566 # Protein_GI_number: 15608021 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Mycobacterium tuberculosis H37Rv # 10 291 22 283 288 173 38.0 4e-43 MRFIHLDSIDDERVAAYVNLTEIQLRNRLEPSKGLFIAESPKVIDRALAAGREPISLLVE ESWIDGMSGMFDVIEKRWGDGIPVYVASPEQLKRLTGYRLHRGALAAMKRWSLPSVEEVC RGARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCGDPLYRRAARVSMGTVFQVPW TRIGGDDKHYWPFTGMRELHDLGFTTVAMALEDDSISLAELVRRLNNAETESDHIDKLAL IFGTEGDGLSHHTISRADLTVKIPMSHGVDSLNVAASSAVAFYATRRVDHHA >gi|148337404|gb|DS264455.1| GENE 157 171482 - 172726 1595 414 aa, chain + ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 5 394 9 392 409 421 57.0 1e-118 MAKNPKILSIVLAGGEGTRLMPLTRDRAKPAVPFGGVFRLIDFPLSNLVNSGYMQTVVLT QYKSHSLDRHISTVWRFSPLLGNYVSPVPAQQRLGKHWYLGSADAIYQTINIIEDVQPDI VVIVGADHVYRMDFQQMVQQHIESGAEFTVAGIRQPISQSNQFGVIEVDPDHPNMIKSFQ EKPQTTTGLPDDPNSILASMGNYVANTDALFAALSLDEKAEDTKHDMGGDIAPYFAARNE AGVYDFNSNEIPGATPTDHAYWRDVGTLKQFYDAHMDLISYVPEFNLYNTEWPIYTLSGN LPPAKFVHAGRDRLGHATDSIVSPGVIVSGGEVHHSVLSPNVRIHSWSQVVDSILFDGVV VNRRARVYKAILDKNVVLTENSTVGIDTEHDLARGFTVTPEGITVVPKGTVVDD >gi|148337404|gb|DS264455.1| GENE 158 172844 - 173431 678 195 aa, chain - ## HITS:1 COG:MT1513 KEGG:ns NR:ns ## COG: MT1513 COG2151 # Protein_GI_number: 15840926 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 92 187 13 113 115 112 59.0 4e-25 MSDTLVPEPQASIFDSVTKALGNDEDAARRVMLNPNLAKGFKDGKPVNKESKKDGQDICG CGNHADACGCSQPQDDDIPLKAVDDIGRATAADVKEALHQVIDPELGIDVIDLGLVYGIE IDELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEFRIDWTWQPRWTMDKITPEGRD QLAALGFNFDNLPKY >gi|148337404|gb|DS264455.1| GENE 159 173536 - 174087 617 183 aa, chain - ## HITS:1 COG:Cgl1523 KEGG:ns NR:ns ## COG: Cgl1523 COG0822 # Protein_GI_number: 19552773 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Corynebacterium glutamicum # 10 172 2 138 149 108 39.0 6e-24 MSDFEMSGSDLEQMYQEVILEAAKNPHGKEHFAPDLASENASHAAETTVQTSHEYCTPGE SHQFNPTCGDEATIHAEVSDAEPYTIERLVWDGHGCSISQASLSVMVDLVEGKTVDEAMK LAETFHKLMESRGKGLNDEQAEESLEDGIVFQGVSQYPMRIKCALLGWEGMKDAVAKALA AKA >gi|148337404|gb|DS264455.1| GENE 160 174094 - 175368 1282 424 aa, chain - ## HITS:1 COG:MT1511 KEGG:ns NR:ns ## COG: MT1511 COG0520 # Protein_GI_number: 15840924 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Mycobacterium tuberculosis CDC1551 # 3 422 9 415 417 382 49.0 1e-106 MTDFAAIRSQFPIFDQEIHGHPLVYLDSAATSQKPQCVIDAESDFYRTINAGVHRGAHEL AARSTMAFEDARAKVAKLVGADSAEGEEEIVVTAGATAGLNLLATAFGNASLGRGGEAAK RFALKPGDEIVVTKAEHHSVLLPFQELALRTGATLKWFDLDEEGRVRSDTANEVITDRTK IVAVTHVGNTTGAITDIAPIIRRAHEVGAVFVLDACQSVPHLKVDFHALDVDFAAWSAHK MYGPTGVGFLYGKREMLEALPPANFGGSMVELAWMDQEAQYMEPPARFEAGTQPVAQVVA AGVAAEWLMNIGMENLEAHERTITDELLKMGDIDGIRILGPRSNKERIGTVAFEVEGVHP HDVGQFIDAQGIAIRVGHHCAQPVHRHFGVYASNRASSGIYNSVEDAQALIEALGKVRPF FGVE >gi|148337404|gb|DS264455.1| GENE 161 175365 - 176144 1191 259 aa, chain - ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 1 248 1 251 252 343 68.0 1e-94 MSTLEIKDLYAHVETKDGIKPILKGVNLTVNSGETHAIMGPNGSGKSTLAYTLAGHPKYI VDSGQVLLDGENILKMTPDERAKAGIFLAMQYPVEVPGVSMTNFLRTAKTEVDGKAPAIR TWTKELSEAMKRLKMDPKFATRSVNEGFSGGEKKRAEVLQLELLKPKFAILDETDSGLDV DALRIVSEGVNRAKEANQFGILMVTHYTRILRYIKPDIVHVFADGHFIKTGGPELADELE ETGYDAYLPEGSDSESALA >gi|148337404|gb|DS264455.1| GENE 162 176160 - 177383 1371 407 aa, chain - ## HITS:1 COG:ML0594 KEGG:ns NR:ns ## COG: ML0594 COG0719 # Protein_GI_number: 15827240 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium leprae # 34 401 20 391 392 281 42.0 1e-75 MAQTQEINIPVADPSDPYANPAAMPSSADRAPRSFDIEAFAKPDRKQEDWRYTPIERIEE FFDVFEPSNETQVTVSMIDGSPLAEGVTYAEGTVGDTGTGIVSKPNDRVSAVEWNSGKRA GILTIDGEIDQPVLVKMHGTGKDLDAFHLSIIAADRAHADVVVEHDGDARLAEGVEITTG KDSHISTTFIQEWNKDSKHVGNQRIHVGEEASLRHSVVTLGGDVVRIRMDQDFGGEQGDL NMLGIYFVDPDEHIEHRTMVVHNHPECKSRVVYKGALDGKGAHSTWVGNALIEPTAPGTD SYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLESRGISENEAR KLVVRGFFGELVEEIGIPAISEHLMNVIDKRLARGESDAIAQVLEEK >gi|148337404|gb|DS264455.1| GENE 163 177389 - 178909 2004 506 aa, chain - ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 41 506 16 481 481 689 69.0 0 MSEWRQRTVAENQASNAAADVEMSQYVADRTRVNEDKIKQDDEIIEQFGDYNYGWHDTDF AGEAAKKGIDENVVRAISADKHEPEWMLEKRLEGYRDFINRPMPQWGVDLKDFDADDFKY YVKPIDKQATTWEELPDEIRSTYDKLGIPEAEKSRLVSGVAAQYESEVIYNSIQKDLEEQ GVIFVDTDTAVQKYPELVKKYFGKCILSNDNKFSALNTAAWSGGSFVYVPKGVHVDIPLQ AYFRINTPNMGQFERTLIIADEGSYVHYVEGCTAPIYSTDSLHSGVVEIFVEPHARVRYT TVQNWSNNVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKASTMSLGFA GKGQYQDTGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVKGAEGSSNSTVCDALL VDEFSRSDTYPHVDVREDNVSMAHEATVSKVSEDQLFYLMSRGLSEDEAMGMIVRGFVEP ISRELPMEYALELNRLVELQMEGSVG >gi|148337404|gb|DS264455.1| GENE 164 179068 - 180729 2143 553 aa, chain - ## HITS:1 COG:ML1363 KEGG:ns NR:ns ## COG: ML1363 COG0504 # Protein_GI_number: 15827710 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Mycobacterium leprae # 4 552 2 551 590 748 67.0 0 MVRRQHGNSQEHVTKHIFVTGGVVSSLGKGLTASSLGRLLRSRGIKVLQQKLDPYINVDP GTMNPFQHGEVYVTEDGAETDLDIGHYERFLDVYLSQKANVTTGQIYQEVLRKERAGEYL GQCVQVIPHITNEIKSRMRAQASDDVDVIITEIGGTVGDIESQPFLEAAREVRRDLGAEN CMFVHVSLVPYIAAAHELKTKPTQHSVMMLRQLGISPDALVLRSDRPLNQSIKDKISLMC DVDSEGVVNCVDAPSIYDVPKTLFDEGLDAYVVRELGLPFHDVDWDEWEDLLERVHHPKH EVNVAIVGKYIDLPDAYLSVTEAIKAGGFANWAKVNVKWVAADKCATEEGAAAALDQVDG IVIPGGFGIRGIDGKIGALRYAREHKLPALGLCLGLQSMVIEYARDVLGITDANSSEFDP DCANPVIATMEEQKDIVAGKGDMGHTMRLGSYPAELEEGSIVAELYGTTHVTERHRHRYE VNVAYKDRLREGGLVISGQSPDGELTEFVELPREVHPFYVATQAHPEFKSRPTKPHPLFA GLVKAALDHQQAR >gi|148337404|gb|DS264455.1| GENE 165 180855 - 186161 6923 1768 aa, chain - ## HITS:1 COG:CAC2679 KEGG:ns NR:ns ## COG: CAC2679 COG1523 # Protein_GI_number: 15895937 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Clostridium acetobutylicum # 904 1565 22 653 720 456 39.0 1e-127 MVVQTNRPLGRVVAMGVTAAMACASLVAAPIVAQAQSKTQANQQKDVQVIAFQQTWNTIA KECTNTYGPEGVAYVEVSPPQESIQGTQWWTSYQPVNYKLDSKLGTEAEFKNMVQQCSAA GVGIIADVVLNQTTGADVAAGDQKGVAGSEYNGSTGSYPGFATKQYPDGITAADFHSCTK NISDYTNQKEVQECRLSSMWDFNSESEKVQDIQSDYLASLWNAGVRGFRMDAVKHIHTDS MKAIKEKFAKKIGKNANDIYWIQEVIGNASEAAGIQPSNYVQNGTVTEFGFKSEMNQTFK DKIANLKGLSDRLSKDLSSEDANVFVTNWDTARNEGALTYKDGAKYQLANAFMLAYDYGT PRLLSDYKWDVNDNGAPGATATSVPDVDMDKACSTNDSDWNCEQRWTSTRGMIAFRNYVN GTKVADWQDDGGDNIAFSRGAKGFIAINNGKKDKDASYTTSLADGEYCNVYATMDCSKTV TVKGGKVETTVPAHSAIALYAGATKASHPAASAATDPSDPDVSQEEDDALPDDRSVTIYY KPANSEWKTPKVHYGLGNDWEQPEADMTLDVQGYYTATINTKGKAIDFVFHDKDTDGWEN PKDGGNYHANVGITHVGVSEQAATVGNPESIGAKTRLVVHYKPSSASDNRGVYVWGTDVN GGNMDAKHHAFTGTDCWGKVAVLNFDGKYDKFGFLVTTSDWNKYGADRSATVSADGTAEV WIDGTKYPDQGEATTVETLDSAPADYACKANTVKVKVHYNRDDGLYYNAEDTSTTVPQWD IWTWASNWNGGAATFTTHDDWGEIAEYSFTNYTYYNNDGASDIGMLRRYGKDAWKAKDPD DADHRIPSNALVFDADGNASAEVWLLGGDATVYTSRPSLGATMKSAEISGTNQLSAKLSK KVSTDDLKGKVTVTDADGKAVDVKSLKADGTKVIITADKDLDVRGKYTVEIKGFGSQNAI AGSVVRTDAFDKKYAYSGEDLGATFTKKQTGFKVWAPTAAKVELITYKSADPNAEIDQTI DMTSESKGVWSATVKKLASGTAYSYRLTFADGTVNTSADPYATAAVANGERSVVLSKKAM GKAGKRMPAFGKTTDASIAEMNIRDFSINPASGISADKQGKYLGVVESGTKTAKGATSGL DYLKSLGVTHVQIMPMYDYGSVNETGDLSYNADGAQNWGYDPENYNVPEGSYSSDPSNPS SRVTEMKQMVKGLHKNNIRVIMDVVYNHVHNAANHSFNKTVPGYYFRYDDNGSLVNDSGC GNDTASERAMMRKYIVDSVTYWAKNYNIDGFRFDLMGLIDTKTMQEVRAALDKIDPSIIV LGEGWDMNSTMDKSEMTIQPNAYQVASDGTNNGIAFFNDSIRDGLKGSVFSDTDTGFVSG KADQESLIAHNVLGCQYDADAITTCWNGNAQDHYADAGQVVNYAEIHDNMTLYDKLRKSV PTDDEATTEARAKLADSVVYLSEGIPAIQLGQEFLRTKGGNDNSYNAGDEVNAIDWDRTT QYSGSVDYVRGLIKLRNRIAALRQTSYNDINASVTMLKSANGVVAYQAKDSSGTYVVIFN ANNDAAAIDGVEAGKYEVLAANGTVYGDDDVKSVTVRKGSAYTAGALSATVLKVASADDV VPVISGVNESTTITVGSKFDPMAGVSATDDIDGDLTDKIKVEGTVDANKVGDYKLVYSVT NSRGKTTTFTRTVHVQKQAVTPAADKNNGNANGKINGKADNTKEDAEKNAAQSPATGSNV AGIALAVMVLAVAAGVLIVLRRKEAGDR >gi|148337404|gb|DS264455.1| GENE 166 186480 - 187979 1207 499 aa, chain - ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 74 495 74 473 660 79 26.0 2e-14 MGAIARRITRVITAVVCVAVSVGVSVATLHVPTREGGGERFNPARYRSDVIVTMFQANWK SVARECGEVLGPEGVGYVQVSPPQESIQGTQWWTSYQLVSYKLDSKEGTEAEFKNMVRQC KAAGVGVIADTVINHTTGVDKTQGTGTAGSPYDNKGYFPEAGYTPSDFHAPCSIWTYRDA ESVWNCQVSGLQDLDTSSPHVRDVLSDYFVKLLDYGVAGFRVDAVKHMPPEDVLAIKKLV AKKSGRSMNDIWWTQEVIGDNAEAAEIQPRNYLKTGQVNEFQYAYRLKSLFSNSLAGGSL SIKDIPQNITDSGKASVFVTNWDTERNNMTLTYKDGDAYRLANAFMLAYPYGAPNVFSGY EFHDTDSGASGATATSVPDIDCSKDSGWSCTERWPDVHGMVGWHNVAGDAPLSDWQDDGD NMIAFGRGGRAFIAINNSVRTRTVTYHTALPAGEYCDVYASADCSGSVHVRFDGDATLTV PAGSAVAFHIAATPYTVRQ >gi|148337404|gb|DS264455.1| GENE 167 188147 - 188596 654 149 aa, chain - ## HITS:1 COG:DR0778 KEGG:ns NR:ns ## COG: DR0778 COG0757 # Protein_GI_number: 15805804 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Deinococcus radiodurans # 4 147 2 143 143 147 48.0 6e-36 MTKVVVVNGPNLGRLGVRQPDVYGKQDLETLRKLCTEWGHELGLDVEVRQSDDEAEMIHW MHQAADEKTPIVMNPAAFTHYSYGLADAAHMVIDEGLPLMEVHISNPSARDEFRKRSVIS PVATGTITGMGFYGYKLAIEAVAHLLEER >gi|148337404|gb|DS264455.1| GENE 168 188633 - 190261 1791 542 aa, chain - ## HITS:1 COG:Cgl1583 KEGG:ns NR:ns ## COG: Cgl1583 COG0337 # Protein_GI_number: 19552833 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Corynebacterium glutamicum # 179 540 10 363 365 319 48.0 8e-87 MAGMRRPVAVIIGMMGAGKTRVGKEAAQMMQLPFADADNEIEHDAGMKIPEYFERYGEPE FRKLESDVVLDMLEDFDGIFSLGGGAPMTPSIQQGLAEYIADGGKVVYLMADPKEAMERA NRGGGRPMLNGDANERWKKLYKERDPVFRRVANVQVRTHGQTPQVAARKLMEMIDQRIVH VTGSTIEPYDVCIGEGVMSQLAQVLGDKPAKVALIHTQAVQRHSDRARTLLRQSGYDVHD IVIPDAEAGKTIEVANGIWQRLGEEGFTRSDAIVGLGGGAATDLAGFVAATWMRGIRYVN CPTSLLAMVDASTGGKTGINTPQGKNLVGSFYTPAGVLADMGALASLPNDIFIEGLGEVA KSGFIMDPEILRMLEDHADELRSFDGSTFLDSDLKDVVAELIERTVTVKAYHVSADLKEA GLREFLNYGHTLGHAIEKLEHFRWRHGNAVAVGCVYAAELSHLLGYIDQDLVDYHRSLLG SLGLPTSWNNGSWDDVLALMHRDKKARGNKLRFVILGSLGHPIHLEDPPADAVEEAFRRI QR >gi|148337404|gb|DS264455.1| GENE 169 190270 - 191463 1237 397 aa, chain - ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 391 1 388 401 444 63.0 1e-124 MLRWQTAGESHGEALVAMIEGLPAGIHVTTEDIVGALARRRLGYGRGARMKFEQDKVRML TGVRFGETIGSPVAIEIANTEWPKWTEVMSADPLDHDIPREGRNAPLSRPRPGHADLTGM RKYGFDDARPVLERSSARETASRVALGEVAKQFLEQTLGIRTVSHVLSIGGAGITDPQNA VLPKPEDLEALDASPVRTLDKTAEQQMIARIDEAKENADTLGGVIEVVVYGVPAGIGTYV ESDRRLDAALASAVMGVQAIKGVEIGDGFLEAMRPGSQAHDEMVVGDDGRITRLSNRAGG IEGGMSNGQPIVVRAAMKPIPSIPKALRTVDVTTGEAAQAINQRSDNTAVPAAAVVAEAM VRLTIAQYVLEKFGGDSVAETKRNAESYVASWPEHMR >gi|148337404|gb|DS264455.1| GENE 170 191513 - 191983 489 156 aa, chain + ## HITS:1 COG:no KEGG:BDP_1024 NR:ns ## KEGG: BDP_1024 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 155 7 161 162 211 76.0 1e-53 MWYMICLPSLLCGMAVSVEDIRARRIPRMWIAVGCLAQVIVDITYALSVNSLFLALQALL FAALSAVLQCALALIKPGALGFGDVTTTLLIGLAVGMFGLFPVVFWWFAISVLGLLWLAI WTRFDPQKHTRFAGKTPFAPTIVVAGAISIAMHALC >gi|148337404|gb|DS264455.1| GENE 171 191996 - 193183 1259 395 aa, chain - ## HITS:1 COG:Cgl1592 KEGG:ns NR:ns ## COG: Cgl1592 COG1559 # Protein_GI_number: 19552842 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Corynebacterium glutamicum # 93 379 49 371 389 113 31.0 7e-25 MTDNLNDFFSDNAQWVDDTSAGSSFDAALPPQPPKSRRDMRKRREQQRRRRYVTIIAAAV VVILVVVGGFFGVRMVKHLRQMNANGSQIQIEDYTGSGDKDTTFTVETGQGAAEIARNLV KADIVKSESAFTSAVAAAGATLYPGSYALKTHMKAADVVKILSDQSKAGGFAEVKAGERV SDVIANAAKMSGKDVSEFQAVIDGGGAGILPDEAGGKFEGWLEPGSYSVQDKSAKDILKE MVTARVNKLDTLGVPDGSERERIMNIASIAESEACNPDDYGKVARVILNRIDQDMPLGMD STVAYGFNTTGSKLTDEQLEDGSNPYNTRVNKGLPPTPISNPGDSAIQAAMNPPEGKWLY FVTTNLKTGETKFVETEDEFWKIRDEYKSNNANAN >gi|148337404|gb|DS264455.1| GENE 172 193198 - 193653 227 151 aa, chain - ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 4 150 19 162 182 68 32.0 5e-12 MVWLGIDLGDARVGLALSDPELTLAHPIGNIQVYGDSFRALDEVIDVIGDESVDHVVIGL PLLLNGEEGKSAKKARRWSVNLEKRLHAAVEDESYSVTRVPTIELVDERLTTVTAHHQLF DARIGGRKHRPMVDQQSAVVILQTALDRSRE >gi|148337404|gb|DS264455.1| GENE 173 193664 - 196342 3252 892 aa, chain - ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 888 1 884 888 733 46.0 0 MRTSEIAKRFLDYFEQHDHLVVPSASLISPNPTTLFTIAGMVPFIPYLMGEQTPPKHRMA SNQKCVRTLDIDEVGKTTRHGTFFQMLGNFSFGDYFKEEAIHYAYELLTTPQDKGGYGFD PEKLWMTTFTDDEEARSMWKNEGVDPEHIQIMGMEDNFWTTGGPGPGGPCSEIYVDRGPK YGVEGGPIADENRYIEIWDLVFENYEVDNVKSKTDLHIVGELENKNIDTGAGLERLAYLM QGKQNIYETDEVFPVIEAAQKLSGRTYGDDEAMDVRFRIVADHVRSALMIMSDGVRPSNN GRGYVLRRLLRRTVKAMRELGVTEPVMPTLLPTSKAAMEPSYPELNDTFHDVSEAAYGEE DAFRRTLESGTEIFDMAVTKAKQGGSDLVSGEDAFKLHDTYGFPIEITLEMAADQGVKVD EAKFRELMAEQKSRARADALKKRHNVDLSVYDDFKKTLLQPIDFLGYTDMSARAKVLGIM QEGKGSVPAVTGPANIEVILDRTPFYAQAGGQLADQGEILSDDGAVLEVDDVQKPIKDLI VHQCRLTEGTLVVGAEVNANIDLERRGAIARSHTATHMVHKALREELGPQATQRGSEDAP NRLRFDFQWSSAPSKDAMNAVEARVNEKLRENLAVTTQEMKFDDAIALGAMHLFGEKYGD IVRVVSIGEDGWSRELCGGTHIDHVGKIGAINIMSEASIGSGVRRVDAVVGQGAYEFNAR EHALVSQLSDMVNARPDELAERVNMLLAKLKESDRRLAAMYESQLAASVPTLVAEAKASS APVKVAKKNVGHFGSFDALRKTVLDVRGQLGEDAPVVVALAGMNEDGKPMVAVATNEAAR KQGIKAGDLVRGASKVLGGGGGGKPDFAQGGGADATKIDEALEALAGQALKG >gi|148337404|gb|DS264455.1| GENE 174 196431 - 196667 266 78 aa, chain - ## HITS:1 COG:no KEGG:BDP_1020 NR:ns ## KEGG: BDP_1020 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 76 1 76 78 137 86.0 2e-31 MFKRLFWVSIGVGIGVVAVTKAQAYVKANTPDTARQFLLGPDQDHVTMRTLEGLVNEFNA TRRAREAELNSKYAARNE >gi|148337404|gb|DS264455.1| GENE 175 196667 - 197056 480 129 aa, chain - ## HITS:1 COG:no KEGG:BAD_0699 NR:ns ## KEGG: BAD_0699 # Name: not_defined # Def: secreted protein # Organism: B.adolescentis # Pathway: not_defined # 1 129 1 129 129 220 99.0 2e-56 MGVGEIAGLIAAIAFAVLAGFMIYPLIRLGKLFDQIAQTVKDTGDHAIPALDESVTTVQQ VNKSLEDVNKISAAASTTANNVGALTDLYGSFLGKPVIKVASATYALKSTVQSFLAKRDV NHAAGNKGE >gi|148337404|gb|DS264455.1| GENE 176 197143 - 197817 612 224 aa, chain - ## HITS:1 COG:lin0907 KEGG:ns NR:ns ## COG: lin0907 COG0406 # Protein_GI_number: 16799979 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 3 208 5 206 224 124 36.0 2e-28 MLLHLHLVRHGQTFFNRYNRLQGWSNSPLTDAGLADADKAAAKLRDIEFAAAYCSDTTRA QVTAQRILDANEAAGHVRPSLVSDMHFREQFYGYFEGQDMSVAWTAAGGPHGAKNYNDIV RKYGLAATRDFLKEADPFHDAESDNEYWHRVEDGFALIADNPRLKDGDHVLQISHGNTLL SLMHRFAPEGYDLSERPANGSVTCLDFDTNEPMDRAVSVVSYNQ >gi|148337404|gb|DS264455.1| GENE 177 197961 - 198587 1048 208 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025715|ref|YP_909560.1| 30S ribosomal protein S4 [Bifidobacterium adolescentis ATCC 15703] # 1 208 1 208 208 408 100 1e-112 MTNVQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRL RAQYGISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHR HILVDGNIVDRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSL KATLTRKPEAEEIPVQVNIQYVVEFYAR >gi|148337404|gb|DS264455.1| GENE 178 198857 - 199672 257 271 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 4 249 2 199 223 103 30 8e-21 MPEQPILEVRGLTREFVRRGKPFPAVDDVNLTLDPGEFMAIVGRSGNGKSTLLNLVTGLL KPTSGSILLAGNEVTTLNDKQMSILRNRTIGFVTQIQTLLPNLTAIDNVVLPAVLHRNPS RYETEIDERTNDAQSQEQTASSVVVDGLPDVVQPASTQTASSSQPDHLTQRAQHLLDQLL VGELATCYPKELSGGEMRRVSIARALMNKPKLLIADEPTGDLDAESTAIVMRLLRQVADD GTSVLMVTHDPDALAYVDHTYRMDRGVLTRA >gi|148337404|gb|DS264455.1| GENE 179 199672 - 200883 1092 403 aa, chain - ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 9 401 10 399 401 212 29.0 9e-55 MPHITLAKLPLANLRRKPFRTSALVIVVVMLTVAFYGGALLSMNLNNGLNSMRERMGADL MVTPQNTKNQAEALLTGNSSSTFYFTNDIGSQIAEADGVGESTVQTYISSLAAACCDEKV QIIGFNPDTDFVITPWVASQFDGTLRRGQIIAGASINVSDNNTVKLYGHEFPVAAQLADT GTSLDNSVFVNLDTVPDVVSYSAQVGHAAIPEEYAGKAVSAVLVKVKDGYSAQQVASNIA KATGIKSLGYVYPGGITATTKTNLKVIIRYVAVFITVFWTMGLVVMLAVFSSAMNERKRE FAAYRILGADRATLVGIIVKESATIGAIGGVIGVTCTSLVVFPFSGLIAKELQLPYLQIG VGKVAVLIVVALLFAVLTGLVASLATAVRLSAPQAYLTLREGE >gi|148337404|gb|DS264455.1| GENE 180 200885 - 201283 392 132 aa, chain - ## HITS:1 COG:no KEGG:BAD_0694 NR:ns ## KEGG: BAD_0694 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 132 1 132 132 160 97.0 2e-38 MPRKLFAAISQIVLGALIAIAPQTFAHVCAVKDMPMACRYTARVALGLGVVIALLAIIGF FAPSRVRAGLDIANAVLGVLVVLVPTMLVGVCRGSMMHCHMVTMPTLIVLGVLLAVLAAV AVYLDLKPAKRG >gi|148337404|gb|DS264455.1| GENE 181 201419 - 204058 2559 879 aa, chain - ## HITS:1 COG:MT0976 KEGG:ns NR:ns ## COG: MT0976 COG0210 # Protein_GI_number: 15840373 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 2 762 12 742 771 677 49.0 0 MGPVMCDPRSLIEGLNPQQEEAVKYYGQALLIGAGAGSGKTRVLTRRIAWLLAHGFWASS ILAITFTNKAAAEMRERLVTLVGPEAEHMWISTFHSACVRILRRDGKEIGLKSGFSIYDT ADSERLVKLIAADLNIDTKRYTPRMLLGKISDCKNALVSWKDQLKKANCDYIPGQRGYQV SAGDVDELVAVVYAEYQHRLALANAVDFDDLIMRTVELLQTCPQVSEYYRHRFRYIFVDE YQDTNHAQYVLVRELSGIDSDEQPDPQARGAGRVGPSWITVVGDSDQSIYAFRGADIRNI QDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIAKNENRKPKKLWTALGQGDKIVGYAAD NAQQEAGWIANEIARIHTEEDVAYRDIAIMYRANAQSRSLEEAMINANLPYQLVGGTKFY ERREVKDAIAYLQAIVNPADNVNVRRILNVPKRGLGARAEGLVAGYADAHGLTFFESIEH MDQIEGMTGRTTKPLGAFRDLMHELADFAKEHDSKPSEVVAEVLDKSGLLEELQRSEDPQ DASRVDNLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPGEGEDSGKVTMMTLHT AKGLEYPYVFLTGMEQGTFPHQRAMEDTSELSEERRLAYVGITRAKRRLYVTRAAVRAQW GQANDMMPSQFLDEIPDELIDWKRREAGVERMRASWGDDDEFGGWDDDDDFGSTSFGESM YGSSTYGSSSYGSGSRGSHSTYGSSHGSHSSYGSGRSSYGSGSRRFSGGSHSGSSSYGSY GSSRSSYGSGKPSGKSGKVTTRRAKPKDLTKSAPASSLDGNNGLSISDFQIGDRITHDHY GLGKVIETQDKGANSVITVDFGTDGVKRLLLRVAPIEKL >gi|148337404|gb|DS264455.1| GENE 182 204259 - 204840 850 193 aa, chain + ## HITS:1 COG:lin1998 KEGG:ns NR:ns ## COG: lin1998 COG0503 # Protein_GI_number: 16801064 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Listeria innocua # 1 185 1 184 192 176 54.0 2e-44 MKELEERIAQQGTVKPGNVLKVDAFLNHQCDVELFDHMGAAWAEHFKGKTIDKILTIEAS GIGIACVVARHFGNVPVVFAKKAQSINLDGDQYTTTVYSFTKQKEFPVIVSKRYLNEGDH VLLIDDFLANGKALKGLIELCHEAGATVEGIGIAVEKGFQGGGDQLREEGYDVDSLAIVE SMDPENGTIEFRS >gi|148337404|gb|DS264455.1| GENE 183 204884 - 206275 357 463 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 39 451 15 421 447 142 26 2e-32 MSEEKNTEKTEKKTKAKDMKKGVSFEALSSLDAPVSFWKGIPFGLQHVMAMFVANLAPIF LVATAAKMDAAQSAAIIQAGLLVAGLGTCLQLYGVWLIGSRLPMVTGISFTYVAAAMSIA QHQGYGAVAGAVVLGGLLEVVLGLTAKYWRRFVPPIVSAIVVTSIGFSLLSVGATSFGGG SGAKDFGSWQNLTLGLISLVACLAFQLLMKGTAKQLSVLFGLVVGYVVAIFMGKVDFSGF ANLQVVSVPHFMPFKLEFDPGAIISFALLYVVSSVEVLGDTAALTKVGLDRQPTDKETAG AIAGDGLISSVSGLFGCLPLTSFAQNIGLVAMTKVVNRKVILSGGLILVLASFVPAVAEV FNSLPQAVLGGCTIMMFGNIILSGFQMISEAGYTQRNITIAALSLTIGIGFTQVGDIFAN FPALFQSIFASNCIAVSFVVAVILNAVLPSEEHFLSAPQHQEA >gi|148337404|gb|DS264455.1| GENE 184 206396 - 208216 992 606 aa, chain - ## HITS:1 COG:BS_yrhL KEGG:ns NR:ns ## COG: BS_yrhL COG1835 # Protein_GI_number: 16079768 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Bacillus subtilis # 5 595 9 630 634 253 29.0 7e-67 MAAKRRFVGLDGLKGIALIAIVLYHCDELSLQGGFFGVDVFFTISGFLIFSSLLNRIDSG KGLELGEYFLKRFRRIYPALFALIPISATLAWLVNRDMLVGIRNQIMTVLLGCYNWYAIS SGASYFSQMNPDIFRHLWFMSLLMQFYLIAPFVVLLLRKIIIRWAPVCILTALAGASAAS MGLLYHSGADPTRVYFGTDTHAMGLWLGAALAWILPILRHEHGRANESRIMERFHKIWIQ FGPIVAFGSLLALLWMMRHITQGPAAFHGGIFVASVLAVVLIAGTIPFGSWMQDLLVFKP LAALGHYSYGIYLWHWPLWLLLRSLLPQWGAWHADRLLSFTFILTVLFAFASWRLFEKPV ARAGFIALIRPISGDEAEHCGRLISTVVVLACSWSFCGYAVATAPEQTSVAQSLGISSRL LQQRNHAALERRRTPMPRKPRHKMPDGSQMAAIGDSVMLASSKGLQDTFPNIIVDAEVSR SMAKGQGLVDQLKAQGNLRPWVLVGLATNSVVTNNQLDDLLNDVGPDHVLVLINAHAPVS WVPGTNAVLKQFAAAHSNNVVLVDWDGTISQHADELAGDGIHPGMSNTIYAQAVKDSIAA WIKQGH >gi|148337404|gb|DS264455.1| GENE 185 208432 - 209661 1825 409 aa, chain - ## HITS:1 COG:MT0422 KEGG:ns NR:ns ## COG: MT0422 COG0282 # Protein_GI_number: 15839795 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Mycobacterium tuberculosis CDC1551 # 1 390 1 374 385 380 48.0 1e-105 MAKTVLVINSGSSSIKYQLVDLETGEGIASGLVEKIGEPVDGHYKHEYNGEKHELEEPIH DHEQGLKRVLGFFDEFGPKLADAGIVAVGHRVVQGGSIFPKPALVNDKTIGQVKDLAVLA PLHNGPEAKGAEVMRSLLPDVPQIFVFDSSFFFQLPKASSTYALNKEVAQQYHIRRYGAH GTSHEFISSVVPSVIGKPAEGLKQIVLHIGNGASASAEISGKPVETSMGLTPLEGLVMGG RTGDIDPAVVFHLIRNAHMSVDELDTLFNKRSGMMGLTGFGDLREVHRLVEEGNEDAKLA LDIYVHRIVGYIGNYTAQMGGVDVITFTAGVGENDDVVRKMVCDKLAPFGVKLDEEKNAT RSKEPRIISTPDSAVTICVIPTNEELAIARKSAAIAEEGKDSYGNVFSK >gi|148337404|gb|DS264455.1| GENE 186 209751 - 211421 1707 556 aa, chain - ## HITS:1 COG:MT0421_2 KEGG:ns NR:ns ## COG: MT0421_2 COG0280 # Protein_GI_number: 15839794 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Mycobacterium tuberculosis CDC1551 # 230 556 5 330 334 330 55.0 5e-90 MSFTSVTIISPEAANGRNVVALGVTKALAAAGKTGVFRPAVCRKDTFTDVLIEASNAGLS REQSVGVCPKRARNDKEGSRADIVAAYTQAVETARPDAMVIVGTDRSAVNDPAMFSFNAD FAADLQSPVLLAVCTIERTPEQVKSTVEASTKVIEDAGSKVVGVFITGCDDTQPDPLKAC FVDYPVPVWTLPAVDFNDDDAISKADEAFATNVDAAELTAALESPFDAPTTPYAFQYGLL GKAKADKKTIVLPEGNEDRIIKAADYLLERDIVDLIIVGDENAILARGQELGLKSLGKAK FQAKDDETVLEPMVAKLCELRAKKGMTEEQARKQLADDSYFGTMLVVMGMADGLVSGSVN STANTVRPALQVIKTKPGTSLVSGAFLMCFKDHVAVFADCAINLNPNAEQLAEIAIQSAE TAKAFGLEPKVGMLSYSTLGSGKGPDVDLVEEATTIVKDKAPDLAVVGSIQFDAAWSPTV AATKAKGDPVAGHVNVFVFPDLCAGNIAYKAVQRSSGAAAVGPVLQGLNRPVNDLSRGAT VQDIINTIALTAIEAQ >gi|148337404|gb|DS264455.1| GENE 187 211624 - 214101 3179 825 aa, chain - ## HITS:1 COG:BMEII0881 KEGG:ns NR:ns ## COG: BMEII0881 COG3957 # Protein_GI_number: 17989226 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoketolase # Organism: Brucella melitensis # 15 804 8 789 792 849 52.0 0 MTSPVIGTPWKKLNAPVSEEAIEGVDKYWRAANYLSIGQIYLRSNPLMKEPFTREDVKHR LVGHWGTTPGLNFLIGHINRLIADHQQNTVIIMGPGHGGPAGTAQSYLDGTYTEYFPNIT KDEAGLQKFFRQFSYPGGIPSHYAPETPGSIHEGGELGYALSHAYGAVMNNPSLFVPAIV GDGEAETGPLATGWQSNKLINPRTDGIVLPILHLNGYKIANPTILSRISDEELHEFFHGM GYEPYEFVAGFDNEDHLSIHRRFAELFETVFDEICDIKAAAQTDDMTRPFYPMIIFRTPK GWTCPKFIDGKKTEGSWRSHQVPLASARDTEAHFEVLKNWLESYKPEELFDENGAVKPEV TAFMPTGELRIGENPNANGGRIREELKLPKLEDYEVKEVAEYGHGWGQLEATRRLGVYTR DIIKNNPDSFRIFGPDETASNRLQAAYDVTNKQWDAGYLSAQVDEHMAVTGQVTEQLSEH QMEGFLEGYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRKPISSMNLLVS SHVWRQDHNGFSHQDPGVTSVLLNKCFNNDHVIGIYFPVDSNMLLAVAEKCYKSTNKINA IIAGKQPAATWLTLDEARAELEKGAAEWKWASNVKSNDEAQIVLAATGDVPTQEIMAAAD KLDAMGIKFKVVNVVDLVKLQSAKENNEALSDEEFAELFTEDKPVLFAYHSYARDVRGLI YDRPNHDNFNVHGYEEQGSTTTPYDMVRVNNIDRYELQAEALRMIDADKYADKINELEAF RQEAFQFAVDNGYDHPDYTDWVYSGVNTNKQGAVSATAATAGDNE >gi|148337404|gb|DS264455.1| GENE 188 214100 - 214378 129 92 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCTPVLLHCDVRLFISLGHEPCLKPCGYAVCLISSHLHILRARFDFLLFFCDCVFNCYFS VRKCVLLSGFLCVLHTLSKRLKNGSKSTFLVG >gi|148337404|gb|DS264455.1| GENE 189 214558 - 216120 2243 520 aa, chain + ## HITS:1 COG:Rv3396c_2 KEGG:ns NR:ns ## COG: Rv3396c_2 COG0519 # Protein_GI_number: 15610532 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 196 520 2 321 321 475 72.0 1e-133 MAAGPVLVVDFGAQYAQLIARRVREANVYSELVPHSMPVDEMLAKDPQAIILSGGPASVF EPGAPRVDKKLFDAGVPVLGICYGFQAMAYALGADVDKAALGEYGKTETTIDKAEGLLDG SPAEQSTWMSHGVAVKTAPEGFEVLAHTEGAPVAAMQDESRKLYGVQWHPEVKHTPMGQK LIENFLHKCAGLGDNWNASNIIEDQVKKIREKVGDAQVICGLSGGVDSAVAAALVHKAIG EQLTCVFVDHGLLRKGEAEQVKHDFVEATGIKLIAVDASEDFLTALKGVSEPEKKRKIIG EKFIRTFEKAQRQVIEEAGASGKEVKFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPK DIKFQLIEPLRTLFKDEVRAIGTELGLPDEIVWRQPFPGPGLGIRIIGEITKERLDLLRE ADAIAREELSKAGLDRDIWQCPVVLLADVHSVGVQGDERTYGSPIVLRPVSSEDAMTADW SRIPYDVLATISTRITNECRQINRVVLDCTSKPPATIEWE >gi|148337404|gb|DS264455.1| GENE 190 216258 - 217598 640 446 aa, chain - ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 8 445 13 429 430 352 45.0 6e-97 MEALHENLWPAPYAGKPLNATVVVPGSKSLSNRYLILAALGHRPVRLVGLLRSRDTELMM DALRALGVRCEIDEQVDTTVTVVPPSDGRFHGGTKVFCGLAGTVMRFVPGLAMFADGPVA FDGDEQAYARPMKPVLDGLEQLGACIEYHGEEGRLPFTITPPQTVSQCAEPSMVSIDSSG SSQFISGLLLIGSRVPGGLELHHTGEKTPSLPHIRMTVADLHGSGVRVNADEHARVWTVQ PGAVQLPETVTVEPDLSNAAPFLGAALIAGGTVRVPHWPESTTQPGGMLPGYLERMGAEI SFPVIDDVRYCEVTGNGHVSGLGDFDLTAAGEIAPSLAAILVFADKPTRMIGIGHLRGHE TNRLEALANEITRVGGAAHELPDGLEITPVSANRLRPSVMETYADHRMATFAAMLGLRIK GIQVKNVATTAKTLPNFVDLWNDMLV >gi|148337404|gb|DS264455.1| GENE 191 217722 - 218087 382 121 aa, chain + ## HITS:1 COG:no KEGG:BDP_1017 NR:ns ## KEGG: BDP_1017 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 119 1 119 125 153 89.0 3e-36 MEHFISRWLVLTIAAGVMVTLLPGMHAVGEPPILGIGAFALFLALINASIKPIVHTIALP FSILSFGLIALIINWLFMELASWLAISLFDVGVTIDGFWWSVIGSLIMAIVSGIVGTVIQ D >gi|148337404|gb|DS264455.1| GENE 192 218109 - 218285 194 58 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSSAIYPIAEDITFVVGLTGFEPATFCSQSRRATKLRYSPFMHSRTWQVNTSFHCSVW >gi|148337404|gb|DS264455.1| GENE 193 218328 - 219497 1172 389 aa, chain + ## HITS:1 COG:no KEGG:BAD_0684 NR:ns ## KEGG: BAD_0684 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 389 1 389 389 717 99.0 0 MGRHQQAEASGIISFMACATLAWIAMDLYLQFAPAIWRVTQRLFTVCAGITAGCGVISFT LGYARNSRSMTLKHGWTIPIRRIFEILALSVVYASTIFVTAFMLLSIASNMMGLRTLKGY LTALCAAISGVVGYVTFVQAELMNAKTIASLLPFFVVSGVSIAGLTSDDPYWYNNNFSQL GDRTTFAARMFNSTLMLAGVCIVIISYFAISELITTHRLQMQYLSASDEKEAPKHFKARI LLLSTMLTLAGIAFIGIGMFRYTPHPILHNVFARGLPCLMSVLMIALPWLAPQLSKVVYV ISDLAIVIGALAGFQWLAGRNTLTNVEALAGMMFLGWFIIFSRQIAAIESDRVQTQLILA QTKRPESVEDLAEVSETVPGTVSRLSSEV >gi|148337404|gb|DS264455.1| GENE 194 219585 - 221729 2505 714 aa, chain - ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 2 707 10 717 836 924 60.0 0 MQIRPGSMYPLGASYDGAGVNFALFSQVAQKVELCLFDEEDRETRVEMTEQNSYVWHNYL PGIQPGQRYGYRVYGPYDPAKGLRCNPNKLLLDPYAKAIEGNIDGDESLYSYWFKSPEDV TSMNTLDSAPHTMKSAVVNPYFDWGNDQHPNISYHDSVIYEAHVRGMTNLNLDVPPDIRG TYAGLAYPSVIEYLRKLGVTAIELMPIHQFVNDSFLQEKGLSNYWGYNTIGFFAPHNAYS SSGQRGEQVNEFKSMVKAYHRAGMEVILDVVYNHTAEGNNLGPTLSFKGIDNGAYYRLVD NDRRHYFDTTGTGNSLLMRSPHALQLITDSLRYWVTEMHVDGFRFDLAATLARQFQEVDK LSAFFDIVEQDPVISRVKLIAEPWDLGSGGYQVGGFPSSWSEWNGRYRDCVRDFWRSQPS TLPEFASRLMGSSDLYQMNGRRPVASVNFITAHDGFTMNDLVSYNEKHNDANGEGNRDGE SNNRSWNCGVEGPTTIKDVNDLRQQQMRNMFATLLCSQGIPMICGGDEVARTQQGNNNAY CQDNAISWTNWDLDDSQKDLLEFVSKLIHLRLEHPVLHRRRFFTGREPGDPDDKIPQVEW MDHTGSIMDMEDWSNTHAFSVMIYLNGSDIPEADWYGNQMVDNNFILIFNAHYEPIMFTL PDERYGKKWRLVVDTHNPKGPELNYEAGFAITAQSRSFLLLMSDRKPTTKNYDF >gi|148337404|gb|DS264455.1| GENE 195 221816 - 222439 447 207 aa, chain - ## HITS:1 COG:DR1007 KEGG:ns NR:ns ## COG: DR1007 COG0494 # Protein_GI_number: 15806030 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Deinococcus radiodurans # 60 184 23 138 166 62 34.0 4e-10 MSDMTSMDMSLNESSDGVDMTRPATVLSREHVYQGAIFGVEDMRIALQTRDGGQTVIRRQ VMRHAPCVVMLVHDCAQDLYLVEREYRVGCDAFAYGLPAGLIDDGEDVDAAALRELREET GVEPIDENSCDIDHVGQFYSSEGMTDELANIMVVHLRHWQAVERHFDADEHVESAWIPWK QLRDTHITASNSEIAILHEQIRRMRQQ >gi|148337404|gb|DS264455.1| GENE 196 222446 - 223351 885 301 aa, chain - ## HITS:1 COG:CAC1303 KEGG:ns NR:ns ## COG: CAC1303 COG0327 # Protein_GI_number: 15894585 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 250 5 254 268 116 28.0 6e-26 MATLKQVVDVLETLYPLRYAEQWDEPGLIVGDLRHDVRNIAFAADPSMAVIDQAIAGGID LLICHHPLFFRSVHAVSGLGFRGEIVRKLNLAGCALWVGHTNADASYRGVSMAAADAFGL IEQRPLVPIEDPKAEHPVGLGRVGRLQEPIALRDFARRVADALPYTELGVQVCGDLDATI GTVAVLPGSGDSLFDEVRAAGVDVYVTSDLRHHPVTDAIEQARYEASMRAADIELGRGDA TVRPMFINTPHSAIESIWFQYAMGDVPRAVSEATGDIPTVRWISMNTDPWNLVLPSCGQE R >gi|148337404|gb|DS264455.1| GENE 197 223404 - 226091 2183 895 aa, chain - ## HITS:1 COG:MT1665_2 KEGG:ns NR:ns ## COG: MT1665_2 COG0749 # Protein_GI_number: 15841084 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium tuberculosis CDC1551 # 378 895 84 592 592 456 50.0 1e-127 MLSQVIDAEHPDHLAVAFDVKGGTFRNQMLPQYKGTRDAAPEELLSQLPLIQQMLTALGV TYIEKPGYEGDDVIGTLASMGDQAGYRTLVLSGDRDAFQLINDNITVLYPGHHFKDLKHM TPDAVQEKYHVSPAQYPDLAALRGETADNIPGVPGVGDGFAAKWINQYGGLEQIIEHADE ISGKKGEALRENIEQVKLNRSVNALVRDLDLGVSVSDLTFGQVDAGQLDDLFTKLEFGVR TKNRVLKTFNADKPSGDVHESSKLGLPHVEDVNDPHVVETWVQNHFPVVQEHLHERHERS SNDIPEFGFEIDSSTRCTDKVKQSWTLYAEGTSKPGEASLSALMIAVHGEAIRIDVFSPD MVQCLQRLFDRYHHSMVVHGYKEHAHLLGSIGVELPEPLFDTKLAGYLAHPDFHADTLEQ AAAHFLDLHIEAQAEAATQGTLDFDEPEENDSKNGELILTRTAIVGLLAEYLAGVLDKRE QFGLLKSIELPVSQVLHGMEQVGAQVDMTRLVQMRDQLAADAAQAQETAWQFAGEQVNLQ SPKQLQKILFEDMGLKPTKKTKSGSYTTNAAALQTLRDRSYDNDRACQFLDALLMHREKN KLKQIVQTLIDATNRHDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRDPAGREIRSAFVP GEGFESLLSSDYSQVELRIMADLSGDEALIEAFRSGKDFHKYVASLVYGIPVDDITSDQR SHVKAMSYGLAYGLSTYGLAQQLKIKPKEAESLKNQYFATFGKVHEYLESLVSSAREKGY TETIFGRRRYFPGLKSPNRAVRDAAERAALNAPIQGSAADIMKIAMIRAYDALQEANLGS RLILQIHDELVVEIAPGEEKQATALVKDAMEHAVTMAVPLDVSTGIGSDWQLAAH >gi|148337404|gb|DS264455.1| GENE 198 226240 - 227004 957 254 aa, chain - ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 28 247 8 206 208 164 46.0 1e-40 MAAEKTTEPDEVLTDEELQAAAAPEPDSANNNEAHKRTVVVAEDESVNRMDLVAMLEDNG YEVVGEAANGEEAVELTRKFRPSVVCMDVKMPRMDGIEAAGIICDENIAPVVMLTAFSQS DLVKKATGAGAMAYVTKPYEESKLLPALEVAMGRFAEINDLLDNVERSESKLQETEEQLK KAEEQLKKAEETLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKKRLAMAII AKYGEQKSEAEDER >gi|148337404|gb|DS264455.1| GENE 199 227313 - 228755 1827 480 aa, chain - ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 2 477 5 469 477 416 50.0 1e-116 MRKAKIVDTIGPATESLEGITSLVEAGMDVARLNRSHGTPEDHLKVYNNLRAAAKATGRN VAALVDLQGPKIRCGWFKKNADGEDKVQLTEGQEFVITTDDIEGDEHITSTTFKGLPGDC HAGDPILIDDGKVRLEVTKVEGNNVYTKVVVAGPVSSHKGINLPGVAVSLPALTEKDEED LRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPVVAKIEKPQALENLEEIVKAFD GIMVARGDMAVECPLEEVPLATKRCIELARQYAKPVIVATEVLGSMVSSPVPTRAEASDC ANAVLDGADATMTSNETAVGKYPAVTVNTMSRISTFATEHGFDRIPELKNLDMSSTGAVS SAAVDLADKLNAKAIVAYTQTGSTVHRVSRERPATPIYGITNNEHTFHWLALSWGTESFL VDEDYHDKSRKDLMVFTDKVLKDAGKVSDGDKIVVLSSAQGEHQPGRTDSIYVHTVGACD >gi|148337404|gb|DS264455.1| GENE 200 228929 - 229912 1372 327 aa, chain - ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 3 318 2 324 369 265 47.0 8e-71 MAETPLVFEIATFAVLAVFFVVDLFIIGRKPHVPSTKECVQHIAFFVVMALIFGGLMWFF AGSKPAIEFYSGWLTEYSLSIDNLFVFVIIMSNFAVPKELQKFVLSVGITVALVLRGMFI LVGAAIISRFTWVFFLFGAFLIVTAIKLVAGGDEDEEYHENALIHALRKVIKITDEYDGE KLRTIKNGVKHWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFIVFTSNVFALLGLQQ LYFLLGELLDKLVYLPLGLSVVLGFIGVKLIMEALHGNSLPFLNGGQPISWVPEVPTWLS LVVIVLAIGGAALASVIKMRTMKANEK >gi|148337404|gb|DS264455.1| GENE 201 229952 - 232063 2372 703 aa, chain - ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 5 701 41 736 739 904 69.0 0 MGFNIERVNKPFVVKSPYKPSGDQPKAIEELATRIENGENDVVLMGATGTGKTATTAWLI ERLQRPTLIIEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS NINDDVERLRHAATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLQEGQQIDRDDLL RKFVDMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAIRIEFFGDEIDRISTLHPLTGDV IAHESQVHIFPASHYVAGPERMERALKTIQQELDERTAELHKQGKELEAQRLTMRTTYDL EMLSQVGTCSGVENYSRHFDGRAPGTPPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD ASRERTLVEHGFRLPSAMDNRPLKWPEFQERVGQTVYLSATPGDYELGLSDGVVEQIIRP TGLVDPQIDVRPVEGQIDDLLAEIKDRVARNERALVTTLTKKMAEDLTDYLLERGIKVEY LHSDVDTLRRVELLRELREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL IQTIGRAARNVSGTVVMYADDITEAMRKAIDETNRRRDIQIAYNKEHGIDPKPLIKKISD VNDMLAKEDVDTQTLLGTGYRNADKAGNSHLGVPHTSKEESGRRHEEILKAGLPAQDLAD LIRQLSEQMHTAAEQLQFELAARLRDEIRDLKKELRQMTEASK >gi|148337404|gb|DS264455.1| GENE 202 232047 - 232484 219 145 aa, chain - ## HITS:1 COG:MT1667_1 KEGG:ns NR:ns ## COG: MT1667_1 COG0237 # Protein_GI_number: 15841086 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis CDC1551 # 12 133 77 190 208 62 37.0 3e-10 MSEHVFSDPNAESERRILDDIEHPLIYDLALSEERQAVEKNPDAVVVHDIPLLAEVIDDI PMRFDHIVTVEAPEQTRVERMMRTRGMSEAQAKARIAHQPTRAARESIADAVIDSSQDVE HMFDCVDRLMEQWRKEARRNHGIQH >gi|148337404|gb|DS264455.1| GENE 203 232514 - 232687 139 57 aa, chain - ## HITS:1 COG:Rv1631_1 KEGG:ns NR:ns ## COG: Rv1631_1 COG0237 # Protein_GI_number: 15608769 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis H37Rv # 1 55 1 55 230 58 56.0 3e-09 MIRIGLTGGIAAGKSTVATHLRELGATLVDYDVLARKVVEPGSVGLQRIVELSGRMR >gi|148337404|gb|DS264455.1| GENE 204 232807 - 234279 2489 490 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119025692|ref|YP_909537.1| 30S ribosomal protein S1 [Bifidobacterium adolescentis ATCC 15703] # 1 490 1 490 490 963 100 0.0 MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKVDHDEVLLDIGYKTE GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEEVFVKVIDVDLDRRRISL SLKQANDSVDPASEDFDPALYGMPAEYDEQGNYKYPEGFDPATNEWIAGYEKQREEWESQ YATAHDLWEQHKEFVAKELENAEASAAEDGQAPKEEKVEEVSNYSSDNTSNGTLADSDQL AALRDQLLGK >gi|148337404|gb|DS264455.1| GENE 205 234433 - 235308 726 291 aa, chain - ## HITS:1 COG:MT3464 KEGG:ns NR:ns ## COG: MT3464 COG0190 # Protein_GI_number: 15842952 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 5 290 2 277 277 293 54.0 2e-79 MGTRIDGKKVAARTKADLAKRVELLKARGIQPGLGTILVGSDPGSVKYVAGKHADCAEIG VNSIKRELPENATFDQVADAVRQLNADPACTGYIVQLPLPRGIDENAIIDLIDPKKDADG MHPYNLGELVLHARGDIATPLPCTPRGVIELLRAYDIDLDGKEVCVLGRGITIGRTIGLL LTRKAVNATVTLCHTGTKDVREHMRRADVIVAAMGVAGFVKPEDIKEGSILVDVGVSRVF DEESGRYKVKGDVDKACYEKALAYTPNPGGVGPMTRAMLLQNVVEMAERQL >gi|148337404|gb|DS264455.1| GENE 206 235454 - 236521 1064 355 aa, chain + ## HITS:1 COG:ML0337 KEGG:ns NR:ns ## COG: ML0337 COG0803 # Protein_GI_number: 15827093 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium leprae # 49 310 30 297 302 117 31.0 3e-26 MRSHQRPFFRILAAGITLCTVLGTASCFGASSEPDQPTAPDTPKEQTTPINVVASVNQWG ALAEQIGGVHVKVTSILSSTTEDAHTFEPKTTAVDTLQKAQVVVSNGAGYDSWATKNLER DTVSVSAAQMVGAVEGDNPHLWFSSDARNAMAKELADTYSRIMPKQKKYFTNKLKAWNRR ETVIERSMKEFSDTHRNVSYAATEPVAYYLLSDMGLSDKTPESYTQSISEGSQPSSKELQ DFQKILEGHQVDMLINNVQKADDATNILTGTAHKSDVPVIDVTEQMPADSKSLISWIAQL IKQMNEAVSSKDDATSSDSDVSPSESNGEQPSNDNPDSDSDAATPDNTGQTDPGK >gi|148337404|gb|DS264455.1| GENE 207 236721 - 237584 781 287 aa, chain + ## HITS:1 COG:ML0336 KEGG:ns NR:ns ## COG: ML0336 COG1121 # Protein_GI_number: 15827092 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Mycobacterium leprae # 3 245 17 263 275 140 34.0 2e-33 MHDKASFCIEFDDAGVSRGGHIIWQHGTFRIPQGSVTAIVGTNGAGKTTMMKAELGLIPI AHGGITVLGKPAGAMNHRIGYVPQSYASDIESNITAEQSVLLGLTGARFGIHPITRLQKD KVRNALEFVGMQDKARYRLSELSGGLRQRVAIAQALVSDPQLLMLDEPLANLDLASQRAT VHVLAKLNRELGMSIQVVAHDLNMLLPILTGAVYLLDGHPHYAKMNEVLDSKLLTHLYGT TVQVVTTPQGDMFVTPSEDEPDDIDVDAHAPEEIARFHQHNRISQEA >gi|148337404|gb|DS264455.1| GENE 208 237587 - 238423 901 278 aa, chain + ## HITS:1 COG:ML0335 KEGG:ns NR:ns ## COG: ML0335 COG1108 # Protein_GI_number: 15827091 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Mycobacterium leprae # 38 267 44 273 286 106 35.0 6e-23 MNETAFSFDPDWMGTLTAPFMTNAFLAGLCIALAAGVMGYFTIARHSTFAAHALAHIGLP GATGAVLLGLPVSAGLGVFALGGALVIGALGKKASQREIATGTVLAFATGMGLFFARLSS SASQQMQSILFGSILTITDGQIVGFAVFDVLLLAVLAVIYRPLLFSSLDEQVAQAKGVPV NLMNICFMAIMAGVITIAVPAVGTLLIFALVVTPAATANIISRSPFAAMVVSTVICLISI WGGLLVSAMFPAPPSFIIVTISTLFWIVAKIIESARRR >gi|148337404|gb|DS264455.1| GENE 209 238432 - 238908 556 158 aa, chain - ## HITS:1 COG:ML0322 KEGG:ns NR:ns ## COG: ML0322 COG0245 # Protein_GI_number: 15827086 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium leprae # 2 154 6 155 158 134 55.0 7e-32 MRIGQGFDAHRFASHDAGKPLWLACLRWDGDGIEGDSDGDVAAHALIDALLSAAGLGDIG MLFGVGSDSAGAGKHGDEMLRATVAYLRAHGMRPVSASVVVVANRPKIGKRRDEAQQALS HAIGCEVSLTATTTDGMGFTGSGEGIAAIASALVEPIG >gi|148337404|gb|DS264455.1| GENE 210 238919 - 239515 676 198 aa, chain - ## HITS:1 COG:MT3689 KEGG:ns NR:ns ## COG: MT3689 COG1329 # Protein_GI_number: 15843196 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 155 162 164 61.0 9e-41 MGYKVGDMVVYPRHGAAKVEAITERTVKGVTREYLQLSVLSSDGLVINVPVENAKKVGVR DIVGAKEVAKVFEILRTPIIEKEMNWSRRYKLNVEKIATGDVNKIAEVVRDLAQRDVDEH GLSAGEKRMLTKARSILTSEIALSEHLDENEAQRLLDVNLGYEAPRPGDEDHHTEAPEEA AMDTLARVEAENKKSKKK >gi|148337404|gb|DS264455.1| GENE 211 239653 - 241908 2450 751 aa, chain + ## HITS:1 COG:Rv1326c KEGG:ns NR:ns ## COG: Rv1326c COG0296 # Protein_GI_number: 15608466 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Mycobacterium tuberculosis H37Rv # 27 749 25 730 731 754 52.0 0 MATESKIKEDSVAVPVAQGDLDAVSNGTFYNPHEVLGGHLGPDEHEDVVTIRVLRPLAKS VTIITENARTQAVHEHNGVFMALIPAIKTDDGFDVPDYRISTEYEDGSTVVSDDPYRYLP TIGDLDMYLFGEGRHERLWEALGARVLRYDDPLGSNDGVKGEQLVGTAFTVWAPNAHAVR VVGDFNGWNGRTHAMRELGSSGVWELFIPGVEAGTIYKYEILNANNEWVMKADPMERSHE IPPRTGSIVVDSVHAWHDENWMDQRAKTDPHNGPVSIYEVHASSWRKDVKNYRELADKLV PYVQKEGFTHVEFMPLAEHPFSGSWGYQVTGYYAIDSRLGGPDDFKYLVEKMHEAGIGVI MDWVPAHFPKDAFALGRFDGTPLYEDPDPTRGEHPDWGTYVFNFGRREVRNFLVANACFW LDEYHIDALRVDAVSSMLYLDYSRKPGQWHPNIYGGRENLEAIDFLKEATATAYKNNPGI MMIAEESTAYPGITAPTDAGGLGFGLKWNMGWMHDTLQYLHEEPINRKWHHNEITFSMVY AYSEHYVLPISHDEVVYGKGSLFGKMPGDDWQRYAGVRALFAYQWAHPGKKLSFMGNEVA QYGEWDHDGSVDWDALNWPDHRGVQKLVADLNTLYKASPALWSQDFDPAGFQWLTSDDAD HNTLSFVRIGKDGEQMVVVVNFSGEAWEDYQVPLTKGGKWTEVLTTDDKKYGGSDIHNGT FKAVKGEYHSRDWSAKITVPALGAVFLKPEL >gi|148337404|gb|DS264455.1| GENE 212 241924 - 242646 790 240 aa, chain + ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 15 239 5 236 239 182 44.0 4e-46 MLNSSAQSTVIPRTVLVVEDEPTLATAIAQRITAEGWTARVASDGASAVQAASTLRPDLV IMDIMLPVMDGLEATKRIVAERPVPVLILTARDDEADKVIGLGAGADDYMTKPFSMRELI ARCKALLRRVDRAKVIAKNSENEKLLDFGSLVIDPAQRIVTVNGEQVHLTPTEFDLLATL ARKPKSVLTREKLLEEVWDWVDASGTRTVDSHVKALRHKLGSKTIRTVHGVGYAFEPPEE >gi|148337404|gb|DS264455.1| GENE 213 242671 - 243747 958 358 aa, chain + ## HITS:1 COG:RSp1162 KEGG:ns NR:ns ## COG: RSp1162 COG0642 # Protein_GI_number: 17549383 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 48 343 196 491 512 157 31.0 2e-38 MRTTDSKPGRSVNPLDTERPIGLFSSLKMELSVLITISTIIAFIMAWFLLKVGLSLWIAM PITLAVALGITYFFSRGLTSPLREMRDAAEAMADGDYTVRVHVDANSRDEVGQLALSFNE MAEELQHADQMRRDMVANVSHELRTPVSALQAMVENMADGVVEPTPSNLESILNQTHRLS DLIAFLLDLSRMEAGAASLQIDKFNFADFIDETVEPLEIADAGHAHNIEIHVPDNIEMEG DQDRLRQLFTNIIANALKHSADNTAVLIEAHENKDFGTIVTNVVNFGSQIPQEARSDIFR RFVKGKTGPGTESGGTGLGLSIARWAAQLHGGTVRVVDDPRGADFEITLPKYHISDDE >gi|148337404|gb|DS264455.1| GENE 214 243752 - 244438 393 228 aa, chain - ## HITS:1 COG:Rv3242c KEGG:ns NR:ns ## COG: Rv3242c COG1040 # Protein_GI_number: 15610378 # Func_class: R General function prediction only # Function: Predicted amidophosphoribosyltransferases # Organism: Mycobacterium tuberculosis H37Rv # 1 208 1 201 213 61 32.0 2e-09 MANLLFPRGCAGCDKPDDVLCDACLASFDCELSQPLETAEMGRWFACGWYRGAARQSILA WKDHGDEECDRPFSDALCRLAERAGVIDAMDGVREICDTILVVPAPSSIASMRQRGRRHM MPLAKRLSAFLRCRTGFRVQVCDALTNKGIKGKSVETKGTEQRAQRLKGHVMVRPGVTLQ NKAVILVDDIVTSGATMRRCVDALTSQGALVITVLALAHTPAGRPLTA >gi|148337404|gb|DS264455.1| GENE 215 244479 - 245285 643 268 aa, chain - ## HITS:1 COG:L165449 KEGG:ns NR:ns ## COG: L165449 COG0561 # Protein_GI_number: 15672552 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 22 264 3 248 252 152 33.0 6e-37 MADISVPYWNIVDVNMLCEGARLIGFDLDNTLARSKKPMKADMAECFSALTSLIDVAVIT GGKYSLLQSQVVDRLSDHADKSKLHLMPTSGTRYYRWDGQRWGKVFSHDLSDEDRAKAKE SLERNAREQGIWATHVWGERIEDRGGQITFSALGQLAPVEAKEAWDPTNEKKNRLACAVA AELPNLEVRPGGSSSVDISQRGVDKSFAVRELADILDIEVGQIVFIGDRMEPDGNDYPAA KAGTRAVKVNGPADTVKLCGEIIARLSR >gi|148337404|gb|DS264455.1| GENE 216 245362 - 245790 361 142 aa, chain + ## HITS:1 COG:no KEGG:BAD_0662 NR:ns ## KEGG: BAD_0662 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 142 12 153 153 261 100.0 6e-69 MQQMPWETPIYRNRHGRGTRTPMFGTRLPRYRTRSGMFDDMLVAQIRRLNGAWPELIAPV QFAVEDVPPSDPAPWEDVPHLGSQSFPAGHGIPPRIVLYRMPLQSHARNRMDLQFAIRDE VVSRLAEIYGRRPEEIDPDWGM >gi|148337404|gb|DS264455.1| GENE 217 245794 - 247245 1277 483 aa, chain - ## HITS:1 COG:no KEGG:BAD_0661 NR:ns ## KEGG: BAD_0661 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 483 27 509 509 757 98.0 0 MAVTLIYRPSWLHADTPTVERSSVGRTVSPRQRQTYCPSRMTIADTDAYGDSEYQASNGN IASSARYAAFGSVFHSSVASMGADMTASVSMLDKKDDSSDDIFVASGNVDDGSRLQDTRL LTASNGTGAVSSVMSWATDGDLKGVSAASCVVPALKQAFLLSGTKTGLTQQLVVANPSAK DTSVTIRIWGSDKSGALALSTGSTLTVASGKETVLNLSAAASGQDALYATVTGTDTPVAA IVRTVSMDGLTSKGSDYALPNNASAKSLALYGLNGGDHATLYLYTSRKTDVTVSWIDSKG AQQTNQQELKANRASAIDLGDVPKSATGIAIAASEPVSATAKISDDGPDGQSDFALVNAS APAKISAIAVPDQSTATVGFVNTADGDRTAIVTAYDTDGKQVDRREIAIRPSASTSVRIA DINDGDVAAIRLKDPAQAVVWNLRVGQKDVSGAKLAGLAIIGAVDLKEAREQVWANQDMT VVR >gi|148337404|gb|DS264455.1| GENE 218 247320 - 250424 1862 1034 aa, chain - ## HITS:1 COG:no KEGG:BAD_0660 NR:ns ## KEGG: BAD_0660 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1034 1 1034 1034 1905 99.0 0 MNSNASSDIQTIVTDVLNSRPYTHRQDVDMSVAAVITAQHDLRFLASTVGAVLAQRMLPG MIVIADCTGQIEQPMQMTFDVIHSSQDVLTEVPEAKTVRVILVGVKQAASFMDAVTRAMD QIGIDAGIRALWTLHDDSRPADDRCFETLLDAWRNTPTAALLGAKQLDWQAKNLHNVGLY AGRHDVVSLVVDGEPDQEQYDGRQDVLSVSLSGALVPLATLRAFEGADPWFGTFAESTDL CRRICLGGGRVVVVPQARIAHRRARFEGIRSKNGRPVEDEDGRIDPYLAVREANAKYAYT DMHRSWWPLLWLWSIIQSLGLAVLCLARKQPYHACCELAMPWRALLRLRGAWRARARLCR QSKVTLKSLSTLSANHRQVREWLDRRRALRDQRDVVLLSPLEKDHLRKRLLRRWGLAFGA ALIAGIWIVVLYWDVLRSVCSGASMYSAQLLPTGASFTQLLHTATTSWSYASGTGISAPN APWLLVLALASVLTGGHVAGAVGLMFFLAAPLTVFSFWALAGIFTRSDAVRCVVALAWFA LALSMGLYDDADVTMLTVMVFLPAAFAFSFRAVGMYRTEDLVNPHASVQAAAVAALCFIP VVAAQPQLLLPLMLTFLGFLLFVRSHKPALLLIPLPAAFVCAPTLVNAVRFASDGTWRQL FGSVMLPSSAHDGKPVVANLSDLLLRVFGIGADGGAWRYVAVSILALIVLLAAVSLVLPF VLRVSRMMWVAVFAGLATALLSAAIAVAVDVDGPVSGSMLPGTTYAMMGLLACICMMSGG AVRRFVMLRQHEKTGAVEIEGRGSKAVSIASHVGRAVLVCLLAVSVVACAGFNYVECDHS QVKTSDAGLPMVATDFLGQDDARRVLALRADSAESVSYSVMRTGRGDLIDSSPAQRVEVV SGRSDGSSRTIAQDCAQLLANADSDAINELGKLGFGGIYVIKQNGDKAQREASNQLNSNI GASDGTQNVVSLDNGTYYRLTVQDLSKQHIDRSGLDKAGSSVWRRSWLWCMGVVLVAYCL VALPRIRRQGLEEA >gi|148337404|gb|DS264455.1| GENE 219 250458 - 250769 347 103 aa, chain - ## HITS:1 COG:no KEGG:BAD_0659 NR:ns ## KEGG: BAD_0659 # Name: whiB2 # Def: WhiB-type transcription regulator # Organism: B.adolescentis # Pathway: not_defined # 5 103 1 99 99 179 98.0 3e-44 MGGLMWGVTDESSENPLAELWGLFKRDDDVSWQHKALCSQTDPEAFFPEKGGSTRDAKRV CAQCEVREQCLKWAIDHDERFGIWGGMSERERRRYKKEHKERA >gi|148337404|gb|DS264455.1| GENE 220 251022 - 252425 1396 467 aa, chain + ## HITS:1 COG:MT0844 KEGG:ns NR:ns ## COG: MT0844 COG1316 # Protein_GI_number: 15840235 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 81 422 206 567 684 97 26.0 5e-20 MATSSTGNKLPNINGLQDAKPRHSLGYRVQHHVRTAVAAAIAATLVFVGTAAAATWMDVN GIIKNNSVGVIGQGSLNTDASIIDPNSGKPIEFVLIGQDSRDGAENQAIGGSFDDVIGNH QADTAMIVQISADRKEINLVSIPRDSLVDVPQCETSKGTIPAQYNVMFNSIFAGAYKTGG DLSSAASCTLNAVNSLTGLNIQNFIVVDFAGLVKMIDSVGGVDLCIPQNVNDPYTGLNLD KGMHHLDGVAATQYARIRHGIGDGSDTSRTTRQQYLIKQLMSEALSKNLFTDTAQLYQLA KSALKSLNISQGMADTAALAGLAMSLKNFTMTNLQTQTVPVVPAPSDPNRSVWTDEADNL WEKMRAGKPIFDTADSNSGDSSDTSSDNSASSDDSGTTDSNQSDTTAETPDPVTGLITKS DGTLVDPSTGGTVDPDDGSIHDATTGQYIGLADRYLNATVCAVPAKN >gi|148337404|gb|DS264455.1| GENE 221 252388 - 252678 120 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLAGFTDDAWSERFAGAKLAGWLGALCEREESVDGMVFLRPDDGMKLGGTLVGSFAPLP SLMVPPKRFVPASYVERGRDCVVYVSSLPERHIRSH >gi|148337404|gb|DS264455.1| GENE 222 252881 - 253843 908 320 aa, chain + ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 20 302 1 287 288 157 36.0 3e-38 MPKRRPRVGRIVLSIFLVLILALGIGVFSAWNWVDDQLNKQTWLTSKADTAGESWLILGS DEREGTIGDAGDVEGFRTDTILVLTKPKTGSSSLISIPRDSLVEIDGSYMKINAVAQLYS RKQLVNEVEDITGQKINHVAMVRFGGLVKVVDALGGVDLCYDQNVNDPYSGMNWTAGCHT VDGNTALAFSRMRYADVQGDFGRAARQRQVINAIVKKGASKQTLTNFNKTKKVAAAALSS VTVDEKASTSSLLRMALAFKSASGKDGISGSVYWTDPDYYVDGVGSCVLLNDAKNIQLFS ELSHGTHSAGTVGTLAEQQN >gi|148337404|gb|DS264455.1| GENE 223 254003 - 255700 477 565 aa, chain + ## HITS:1 COG:CAC0408_2 KEGG:ns NR:ns ## COG: CAC0408_2 COG1674 # Protein_GI_number: 15893699 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 110 326 446 672 1312 167 40.0 4e-41 MLAQLIMLIVMCMQRHWLYAAMLAPSLLGSALMLITMIMRVRHEETNSNTITGSDSPVPT HHNGNEIDHAQLFADMPSISFEHLHGLDNDPLIWRTIVRNWLVRSPTNGIGMSEHGIFHI DLASSGPHAMVAGTTGSGKSELLISWCMALAIRHSPQTLHFVFLDFKGGSTFNALERLPH TVGNVCDLDLAHAVRALNAIEQELARREALVSAERVSRFDQLSHPPARLVVVIDEFHALR DRLPDYMQRLNRLASLGRSLGMHLIVCTQNPMGQVHADMKANISLSICLRVTDQMQSNEL IGTKDAALIPPAFPGAAYCHDGQRTVPFRCSAVHDIDSLVHAINTASAFSGTTNPSPLFS APLAPHAGKDDLTAPQREAWHHVPFALSDDGVLISTAFLDVGHGNIAVIGACGSGKTNLL LCCASRLYESGRCTIRFTRKTNSEWTTDDGRISPQHERTIWFVDDADELLSPFAAMPEAD KLKTALADPSVTVIAAVEKPQSTLLERCLTRVAFPCGERATDVMMGIPSAVLDGFGVDDY AIAGRGVFIQQARACPVQCAEFQGF >gi|148337404|gb|DS264455.1| GENE 224 255804 - 256082 313 92 aa, chain + ## HITS:1 COG:no KEGG:BAD_0655 NR:ns ## KEGG: BAD_0655 # Name: wblE # Def: WhiB-type transcription regulator # Organism: B.adolescentis # Pathway: not_defined # 1 92 1 92 92 164 100.0 9e-40 MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQD YGVWGGLSEDERRALKRRAMRARRSQAMQMQV >gi|148337404|gb|DS264455.1| GENE 225 256165 - 257691 1765 508 aa, chain - ## HITS:1 COG:MT3316 KEGG:ns NR:ns ## COG: MT3316 COG3920 # Protein_GI_number: 15842807 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 35 498 22 489 501 283 39.0 5e-76 MVCNLAIDAYYGCMADFSHILMTRPDFGDDDREWLHQLVADWQVIADLSFADLLLILQNG EGKYIIAEQCRPSTVMSLRAEDVVGNVVPESLCAELDAAMDSESVFRSSKLRTVGKAKVC NVYAPVRHNGKTLGLVVRETNMATRESNGRYESESISAGKQLYEMIPRGQFPYRNPVMNQ RHNARVADGFIVLTVDGIVRYASPNAISCFRRLGSVSTMQGEYLSEIGTKLLHENDPVLE TLPLVLSGKAAVDSELDANKAAVSMRSLPLMDANGRVGGIVLCRDVSELRRREKELQTKD ATISEIHHRVKNNLQAVSALLRLQARKTKSEEVKKELKEAQRRVQTIAMVHEGLSQTADE IVDYDKVISNLLKMAVDLATMRDQHIDVDFVGKFGMMPAQDATPLSLVLTELITNSVEHG FEGRKEGHITISVGRGGNNLNVVVEDDGTGLADEEHDGMARSSGSGLGTQIINTFVTNDF GGTVHWEPRRGGGTRVVLDMKLRAAQDN >gi|148337404|gb|DS264455.1| GENE 226 257784 - 258671 948 295 aa, chain + ## HITS:1 COG:ECU06g1500 KEGG:ns NR:ns ## COG: ECU06g1500 COG1272 # Protein_GI_number: 19074401 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Encephalitozoon_cuniculi # 82 286 2 207 218 126 35.0 4e-29 MAKPTNAEIEAKRAVIAEAREQALQAKAETIRVKAHNKAENIRRKADAKAKRAIAKGEAH AAKIEGIVPAEIERKIRLDVHGRPKPLLRGWIHAIATPLALAAGIVLICLAHGTGLKWAC AVFMTCSLVLFGNSACYHLGDWSPRVTDVLRRIDHMNIFLLIAGTYTPVSFALTPFWRDS IIAGMWICTTVALIIHVIWISAPRWLYVLVYIIFGVSGVAFMGLFWMSPYAGPTVVILLC AGGACYIAGAIVYALRKPDPWPKVFGFHEIFHTGTVAGYACHMVAIYMVIVQLWP >gi|148337404|gb|DS264455.1| GENE 227 258769 - 259248 790 159 aa, chain - ## HITS:1 COG:MT1111 KEGG:ns NR:ns ## COG: MT1111 COG0782 # Protein_GI_number: 15840516 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 161 164 90 38.0 9e-19 MAEEKTILLTQEAYDKMKEELAWREGEYRDEILSKVSAARAEGDLSENGGYQAAREAQRV NQGRIDELTVKLRNAKILTAPKAGEVGDGSLVTLEVNGREMVYVLGTRDLSIATDYSIIS PESPIGAAINGAHAGDTVTYTAPNGREISVTIKEAKPLA >gi|148337404|gb|DS264455.1| GENE 228 259287 - 259694 644 135 aa, chain - ## HITS:1 COG:alr0577 KEGG:ns NR:ns ## COG: alr0577 COG0545 # Protein_GI_number: 17228073 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Nostoc sp. PCC 7120 # 21 135 53 165 165 81 43.0 3e-16 MASEMPVVNAEFGDRPTIEFPTEIAPAGLKVVELFEGNGPMVRRGDTVTVNYHGVVWGKD TPFDSSFDRHQPATFGIGVGQVIKGWDQTVPGHNVGSRLVVSIPPEYGYGSRGVPQAGIG GEDTLVFVIDIISTR >gi|148337404|gb|DS264455.1| GENE 229 259747 - 261207 1193 486 aa, chain - ## HITS:1 COG:PA2443 KEGG:ns NR:ns ## COG: PA2443 COG1760 # Protein_GI_number: 15597639 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Pseudomonas aeruginosa # 2 486 3 458 458 474 51.0 1e-133 MFSILEMFTIGVGPSSSHTVGPMVAASRFAASLERDGILNRVGRVRTVLYGSLALTGLGH GTDRATVAGLEGNVPKTVDTDHMSNIRMECEAGGELMLNGTHRIDFDYGRDVVMDVWHRM AAHPNGMRFQAFDRQNNLIDEQVWYSIGGGFVRQGDADDLMIGIHEKPPAGTAFADQTDD SSTDIDMDMPYPFTTCDELISLCDERHMSVADVVWANETAMRSAVQVRSDLDTVWHVMRR CVQHGCNTNQTVLPGGLDVPRRAPKMYARLASNSDVLKRDGRRSDAVLESSDAAWVDLFA LAVSEENAAGGRIVTAPTNGAAGVIPAVLHYYWHFVDHADEDGVVTFLLTAGAIGYLFKR NASISGAEVGCQGEVGTACSMAAAGLCAVMGGTPHQVENAAEIGIEHNLGLTCDPVGGLV QIPCIERNAMAANTAINAVRMAMLGDGTHIVSLDQAIKTMKDTGEDMMAKYKETSKGGLA VNVVEC >gi|148337404|gb|DS264455.1| GENE 230 261241 - 261816 702 191 aa, chain - ## HITS:1 COG:no KEGG:BAD_0649 NR:ns ## KEGG: BAD_0649 # Name: not_defined # Def: Cd efflux system component # Organism: B.adolescentis # Pathway: not_defined # 1 191 1 191 191 298 99.0 1e-79 MTSKDIKPVIEQPATEIPLMLAQAIIVAGVLAIGEIACSPLYFTLMDHSLALVPWALEAA FLAVAFTFVVGFALLWCAESFTFKLKERFRPFGYAAVGLIGYGVWSLLVFTATINSILAK VGESVLTNGQVGAIALNGAALGFVAFLFAKLLDVKLGNRKTVAIILLIAEIVIAIIGLLI MIRMFSVLYAA >gi|148337404|gb|DS264455.1| GENE 231 262066 - 263235 869 389 aa, chain - ## HITS:1 COG:SA1835 KEGG:ns NR:ns ## COG: SA1835 COG0582 # Protein_GI_number: 15927603 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Staphylococcus aureus N315 # 11 371 6 387 390 91 23.0 3e-18 MAYTIRQYTTKSGKRYEVRYRKPDGSSTGRRGFKRKMDADAWGAANVTAAKSVGAYIDPQ AGRRLVEDFWEPWLAAKKTKAKPSYIKSLEDAWRVHVEPQWGMREMQSITRDEVQRWVTD LAGRRSASVTIRAENLLRSLMERAKADRCIHDNPCDGIELPRKQVRKHVYLSADELSRVA MQCGWREPIVLTLGLCGMRWGELVALRVEDVDLQRCRLHIYRSITRLSSRLVETDPKTHD GRSVMFPLVLRPLLARQCEGRRSSDFLFTAPGEPLDEPMGNGWNPTRSDGWFAVALRRAG VDRGHMTIHDLRHTAASLMVQSGANVKTVQRQLGHKSAAMTLDVYADLFDDDLDDLSERM GGLLFSQNVGKMWAKATQGVDGTVETVGV >gi|148337404|gb|DS264455.1| GENE 232 263345 - 263644 218 99 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487524|ref|ZP_02028931.1| ## NR: gi|154487524|ref|ZP_02028931.1| hypothetical protein BIFADO_01379 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01379 [Bifidobacterium adolescentis L2-32] # 1 99 9 107 107 152 100.0 5e-36 MAHPAVSANGQPNHALAAVPSANTALTIDSVLMMFHGIIGDMGFRPLGLAGTLAHFLFFG FRLISLMSPVTALMRAAMLATRSEMLVIISDGVMFTSFP >gi|148337404|gb|DS264455.1| GENE 233 263689 - 263895 310 68 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0874 NR:ns ## KEGG: BBPR_0874 # Name: not_defined # Def: GP28 phagic protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 68 1 68 68 87 86.0 2e-16 MTIEYLSVTDVSKRLGISTAAVSAYKLPQPDALIGRTRGWLPDTIDQWNAQRPGRGVGGG RPRKNKTE >gi|148337404|gb|DS264455.1| GENE 234 263956 - 264657 561 233 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1803 NR:ns ## KEGG: BLJ_1803 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 233 2 234 234 195 47.0 2e-48 MLRIDERELKAKLNEHKSLIGRGSVGDGIGNLVAGVFYILTVRTTSGLRQSTQWTLYGLG AIIIVIGVAALFSKRLSAAKLYKEIETMNRRPSSLIAVKDGGKLSNRYLTYYDEPWGCWF LPNHSSRDSYSEDKARMSEYLSTEFKIPEDDFTLGFLGTTTSTKWSTEHNEERTYDYRLY TATVSVLPADWRLDGEFIVGSKRCRWMTLDDMRNDPKIYEINSDVIQMLGDRI >gi|148337404|gb|DS264455.1| GENE 235 264826 - 265104 444 92 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0114 NR:ns ## KEGG: BBIF_0114 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 92 1 94 94 145 84.0 7e-34 MAQHAAPTTLETTVNNLTNEREDGQDNQQPDAYTPVFSKGVRTVVYVAGLIASCVGLGFM TFGDAAVGGYISTVAGFIASGLGVAYNPLRRN >gi|148337404|gb|DS264455.1| GENE 236 265116 - 265916 803 266 aa, chain - ## HITS:1 COG:L15795 KEGG:ns NR:ns ## COG: L15795 COG0791 # Protein_GI_number: 15673361 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 38 266 32 259 259 77 32.0 3e-14 MASVSTLINRMRYWCAVANLGYSQADRWNFNPSGGNCDCSSLVIHCLKEAGFDTGSATYT GNLSDNLTKRGWTRLPADGNPQAGDILLNDVHHVAVYLGGGRLAQASISERGTAYGRAGD QTGRETNIRAYYNYPWNAYLRYMGAQSSAQAAVSGAIAVDGNVGPATVRRWQQVMGTAVD GIISGQQVPDGRTYARPAIDSSVVRYGSGGSDLIRAVQRRLGCGVDGLLGPATIKAIQRH YGLAQDASFGPATARALQTALNQNRF >gi|148337404|gb|DS264455.1| GENE 237 265919 - 266038 187 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIDVTMTPEMTPQGDSLPPESIPIVSEEDAAKAVEGLED >gi|148337404|gb|DS264455.1| GENE 238 266112 - 266198 68 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTHLAIAGGAYLILLALILIFNHGAHMR >gi|148337404|gb|DS264455.1| GENE 239 266195 - 266551 373 118 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0111 NR:ns ## KEGG: BBIF_0111 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 118 12 129 129 217 86.0 9e-56 MGGACAVITLGLKVWPGALESLATGLYAHVNPERLPYNSVLSQHFAKTRQLGERSERFDG RLDELCRDTIKNTLISLIYGDQSHDHSEAVRYELAKLEKLDAQCWIVNAAEKYLEERQ >gi|148337404|gb|DS264455.1| GENE 240 266606 - 266998 326 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487531|ref|ZP_02028938.1| ## NR: gi|154487531|ref|ZP_02028938.1| hypothetical protein BIFADO_01386 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01386 [Bifidobacterium adolescentis L2-32] # 1 130 1 130 130 236 100.0 3e-61 MSFIVNSCVMPKDGVSVKTTNTTPSDITFTGLTAGVKYHVSVVCYMLSTSGDNPRLRLTT NGSDSGLVSSNGRVDYVFTAASTTHGILVGLNSCTVNLSKGLCVPQDQWQQLVSLGLPGN YFDGDTMPKD >gi|148337404|gb|DS264455.1| GENE 241 267018 - 267386 210 122 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487254|ref|ZP_02028661.1| ## NR: gi|154487254|ref|ZP_02028661.1| hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01098 [Bifidobacterium adolescentis L2-32] # 1 122 1 122 122 102 42.0 1e-20 MMVTNLISSPRAHVTLNPGEYTPISTIEKTPGTKYWVTVWLDVSGGSVTIDNCPDTFSKS QRIRWSLTSTNANPMSLRYKVVSGSPTVKVWNMVMCELGEYQANKALLDGLYFFDGDTMP LA >gi|148337404|gb|DS264455.1| GENE 242 267414 - 267881 542 155 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487534|ref|ZP_02028941.1| ## NR: gi|154487534|ref|ZP_02028941.1| hypothetical protein BIFADO_01389 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01389 [Bifidobacterium adolescentis L2-32] # 1 155 1 155 155 282 100.0 7e-75 MQRINYFTNPNFTGPFADINISGEAKASYNANTKQLNIYGNNGGYGFNLTVPKNAALVFA CFLWTEHDKNPNPLTVYSLESSDNKIIASATVSQNANDLLLRFNSTDSGRIRVEFYPNGS AANIANPILELADTYDKAVGGGLPSFFTGDTMPRD >gi|148337404|gb|DS264455.1| GENE 243 267868 - 268038 195 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487535|ref|ZP_02028942.1| ## NR: gi|154487535|ref|ZP_02028942.1| hypothetical protein BIFADO_01390 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01390 [Bifidobacterium adolescentis L2-32] # 1 56 1 56 56 71 100.0 2e-11 MTQIPADANDVIDQLSAQIGTLNKQIAILTSQLNAAMKLIPADVLDATKETDNAED >gi|148337404|gb|DS264455.1| GENE 244 268110 - 268424 381 104 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487536|ref|ZP_02028943.1| ## NR: gi|154487536|ref|ZP_02028943.1| hypothetical protein BIFADO_01391 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01391 [Bifidobacterium adolescentis L2-32] # 1 104 1 104 104 146 100.0 6e-34 MADVTTETTTDTAPTVTPAEPSGVLDLRPPKESVRAELCRLGLEFSSADGTSESWRDYQR GVLATFDDSGADVTLTDVKTNLGRTLTLDELKAVTRIDTMTAAD >gi|148337404|gb|DS264455.1| GENE 245 268436 - 268990 328 184 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487537|ref|ZP_02028944.1| ## NR: gi|154487537|ref|ZP_02028944.1| hypothetical protein BIFADO_01392 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01392 [Bifidobacterium adolescentis L2-32] # 1 184 1 184 184 298 100.0 1e-79 MQTVFEDGNLVIRAETEGERGLVCGMDAIAAWRALLGTTSVAETCAAMMQARESAGSYDP QTGRNAYTTAYEGLEAALSDTAAESVSMMSDSGEVQDDPMTAARNRTRTALGLPPITNKT DSAVQAAMLSGEAADATPTTGIDTDCVDAKAIGRLFATEAMRADLDECEERFYEALMPRQ NQQN >gi|148337404|gb|DS264455.1| GENE 246 269003 - 273958 4781 1651 aa, chain - ## HITS:1 COG:no KEGG:Blon_1825 NR:ns ## KEGG: Blon_1825 # Name: not_defined # Def: fibronectin, type III domain protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 959 1 1064 1363 757 48.0 0 MAKSLHARLVAYRPFGERIGVLAEPVSFSASMLHNDDGAISIEYSMLSGDAQAFDRELTD GLEVAVEVSDGSGYREPDNARFVITGRSGKTDDRTKTITYSGQSIGWLLSKAENNDASHL IADGDNKGKRPFYSSNPGTILKTLLDENRQRGGVATGLILGFDTAKDAGGAAWAKKYTLY YSLGTDLQTILSALVNGGGCDWRTSGRTLKLWNADSTALSRDLSKSVVLQLARDISEAPF EESIADLASTILVEGDNNLLFRMDNPAAPTPWGKWESYSSQGGVSDKDTAQAFMQSTLDD AARVRGQYTRDLVTANVDNLPLIDYHAGDWITAPTVAHGEKVRVQEIDLSMRQNEGLSCS IALNDIKYDASVRQAKKIKGITGGAALAGSEGGTTASSDRDHRVPKAPLGLVVQTDAYIG SDGFAHGLATAMWSAVTQATNNTAIEISNYAVEWRRHVDGAPWHSAGTTDKTQLGFGGLD CGTQIEVRVRAVPTYSDKLGEWSAVVVATVESDTTPCSVPSKPVLSSELGVVTVHWDGRT STGASMESDFDHVEVGEGVNAAGMTVISANQSGQGDYLVTGLAAGSQHSYALRSVDHAGN RSDWSAIASVTVASAVSPDEVKQIQKDLADNQTALKDNTAKLTQAQKDIQANKSNLDAAS KSLAQAQTDLSQARKDIAQTKSDLTTANGEISKAKESAAQAYAEAHSKNHTFRGPDEPKD NLIVGDLWLKTQKYWTRWKGEKNNSPSLLADFYTYWQGEANNSPSALVPLSDRVIETLVW DGSAWNHLGYADVEKNANEIAQAKSDIADNAAKTTDAKKAAENAAAAAKTAQGTADTANG AAKTAQDTANAAQTAAKSATATAGQAKDAANAAQTAAESAKKTAGNAETLANTANESAKS AKSDAASAKTDAANAKTTAANASSVATQAKATADSAAQSATDAANAAQKANTAAAAAAGV ANGKADVLIQGTAPDASMRKASTLWIDTTNGANTPKRWNGNLWVAVTDKAATDAANAAVK ANTAAKTAQDTADKAATAAANAASQANQANAAAKKAQTTADGKNLIYRGPDEPNHDGLKP GDMWWRTQKYWTRWKGKKNASPSMLADFYTYWQGAPNNSPSVLVPLSDRVVEVLTWDGTR FEPFDLVANNILAAGTVAAKHLAADSVTAEKVKANAITADKLAANSVTTEKLVSDAVTAG KLAADSVQARNIVALAITSDKIAANSVTTGKLKVTEDMTVALLTVHKIQAGEIAANAVTT AALAAGAVDADKLAANSVNASKIVTGAITADKLAANSVTAVKIAAGTITSDKVAAGQFKG YVFTGAVFQSSEAANTGMKLNSTALQMWDSNHKQTVYLDGEGKSNVLTGTFQTRTSGHRI QISPDYQSYAISGSETFVGDGIEFPAYNGSTGYYRYPAIASVIQSSEVGTMSELDLWSGH VAKNDPGTQLRLQSRPRSKGATGSGITSKAYLSASTNWEEADASKKSSAWLDMEGVGGSG ASAYLDVRSDSGSLCEIGVKAYGAKAKTWCTASDANGEVGVVSDISTGYVYLGGYLGGIN GRHTFQSTNWRIYQNVTLTADSTVPPTTWSWTPAKFGRYHGVCNSDLNWGSIFMHVYNTG GAGSMQVMGYNAGTAAFHGDMYVNAIAWLTK >gi|148337404|gb|DS264455.1| GENE 247 273962 - 274867 683 301 aa, chain - ## HITS:1 COG:no KEGG:Blon_1562 NR:ns ## KEGG: Blon_1562 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 3 300 5 315 316 117 32.0 9e-25 MKVSYSLNGQPLDSERMRVLVGTTHYTALSPIVDTVQVPGRHGFIVGSSIPVLGAPELTV KVAAWGADSDSLIARFRAMCLYASKLTLGRTETTEGGYSRSMVTRVVCTSCEPDDDERPF SDLRVMTAVFQLPDVFWRGVQWQEKTLAATGGLLLPGGVSKPSSKGYWTRWQGLPNASPS ELFDTLPDGWLSDAPITTLVLRFGASTGVTIADPVSGTNLMCGGKRDASRPYLFIDVANR KAWTAANADAWSGGTDASNGVDWTTEPLQVWPAIDSGDYRLAIKQTGSADKVTCRFLQSW E >gi|148337404|gb|DS264455.1| GENE 248 274884 - 277661 2608 925 aa, chain - ## HITS:1 COG:SPy1448 KEGG:ns NR:ns ## COG: SPy1448 COG5412 # Protein_GI_number: 15675357 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Streptococcus pyogenes M1 GAS # 267 733 5 445 785 182 34.0 3e-45 MAFGSELGSAHISVFPSMKGFRSVVNKEVGASGKAASKTFDSNMNGGKSGGLFGRAFKNG FKESANDFSADVLKSYERDVAKSTAAYRQAMLQQKAAANQVRAAEESVANAIAKHGEGST QAEAATIRLEQARLKLSTMTDRATQSENRLKDAQKALKDAQDNLASSSGSLGSAFKNLGS AIIQPVSGAFGRVKNAATSAFSGIATKARDGMSAAGAAMQSTASRLTAPLSAKFSAMSSA IAARIPAPFKNVSNAIGGYLGNVGGAVGGVLSQIPGAAGSVASAIGSKFKSGADTAWNAI SSMSGKAVGALKGVATVGLAGVGTAVAALAGVGKSALDAYATYEQAVGGVDTLFKDASGT VQEYAAEAYRTAGVSANEYMTQVTSFSASLISSLGGDTAKAAELGNTAMIDMSDNANKMG TDIESIQQTYQSLARGNYAMLDNLKLGYGGTKSEMERLIQDANKVKQANGEMGDLSIDKF SDVVQAIHIMQEQMGISGTTAKEAATTIEGSVGMMKAAWQNWLAELGKDNADIKGLTKHL VDSVGTVIQNVGPRIAQIITGITAALPQLFSSLGSTLPALVMQILPPVLGALGQLGTMLL TSATTWISTSLPQLLAQFQSWVTSSLPSFLQTGLTMITNLLQGIVQALPQIASTAVIVLT TLLDGLSAQLPQLIPIGINAVLNLVQGILNNLPQIIDSGLKLILGLAQGLINAMPDLVGK APILIGQLVGGIINRLPQILQAGVQLLVALANGFIASVPRLIGAIPGMVGQIMRGFTSVN WGSVGLNIITGIAYGIAGAAGRLVSAAVNAATNALDWVKRRLGIHSPSRVFRDQVGEMIG EGMAVGIDESASKVRKAAGRLTGILPSQDASYSVGVANGSRGVNAAAYGNGGSVTNITQT FNYPAIAPTSISTQQKLQTAAMPQW >gi|148337404|gb|DS264455.1| GENE 249 277686 - 278012 239 108 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487541|ref|ZP_02028948.1| ## NR: gi|154487541|ref|ZP_02028948.1| hypothetical protein BIFADO_01396 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01396 [Bifidobacterium adolescentis L2-32] # 1 108 1 108 108 209 100.0 5e-53 MIRADFTTHGWSLQADLGGRLRYGDAIALLEQIIGDPSSYTGAEFNGLDYPARWGEIPVV YAFGGDEYPKPFDSLAKRLRADREKAERERLREQTKGMSPVFRTLYED >gi|148337404|gb|DS264455.1| GENE 250 278009 - 278431 550 140 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487542|ref|ZP_02028949.1| ## NR: gi|154487542|ref|ZP_02028949.1| hypothetical protein BIFADO_01397 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01397 [Bifidobacterium adolescentis L2-32] # 1 140 1 140 140 260 100.0 2e-68 MTSTSTDFKPTVEDFDQWTEKNDEEAFASIAQNYKVRHIIKGDVYWALVPGGRTYKLPLS MSIDDFTRLSNTSDDTESVEQLKRILSDFAGDKQAKQLNGEPVQVVFNLLSDYGDAVVRA QGASLGKSNGSAASSPNTGV >gi|148337404|gb|DS264455.1| GENE 251 278536 - 278802 231 88 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487543|ref|ZP_02028950.1| ## NR: gi|154487543|ref|ZP_02028950.1| hypothetical protein BIFADO_01398 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01398 [Bifidobacterium adolescentis L2-32] # 1 88 4 91 91 89 98.0 6e-17 MAVTSADGNTRPSVVQGAKLALKAVATHVDKTTVDVTGQATFKSKDAGVATVDGGTLTAV KAGIARVNATYDGVTSPDLTVTVTARAA >gi|148337404|gb|DS264455.1| GENE 252 278808 - 279407 831 199 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487544|ref|ZP_02028951.1| ## NR: gi|154487544|ref|ZP_02028951.1| hypothetical protein BIFADO_01399 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01399 [Bifidobacterium adolescentis L2-32] # 1 199 1 199 199 387 100.0 1e-106 MAKDSQGMDLGQVEALVTAAIMIVPYSTENKITPEMIASSKATPELPAAYNRSTACIGLV KSDGGNQDSRDGDDPLEFLQDGYKKLPLATSLTQTFSPAENNALTRKITIGEPDAQGVYH VADIIQDAKWMVYEEETFDTGRVHRRAGVMQVTGNEPDQQERGSVTGRALTVEWMKDPLY VDEEHPNTRWIESWYDPKA >gi|148337404|gb|DS264455.1| GENE 253 279420 - 279851 452 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487545|ref|ZP_02028952.1| ## NR: gi|154487545|ref|ZP_02028952.1| hypothetical protein BIFADO_01400 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01400 [Bifidobacterium adolescentis L2-32] # 1 143 1 143 143 284 100.0 2e-75 MASVIPPDLELFLAGWLRSNLADVDGLQAGNRIPDGYDGSYPLVVVRDDGGTQSADRVTF DRSIGVNVLGWTRNDTKPCRDLAARVYGVLTGEPGILIGFAEGSRICAVVPDGCNGPYPV SEDAAWCRYYMTVEYSTAGIRQP >gi|148337404|gb|DS264455.1| GENE 254 279851 - 280138 306 95 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487546|ref|ZP_02028953.1| ## NR: gi|154487546|ref|ZP_02028953.1| hypothetical protein BIFADO_01401 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01401 [Bifidobacterium adolescentis L2-32] # 1 95 1 95 95 168 100.0 1e-40 MAKSRISVDFNPKFFDGILNSAGVKALTTLAANRALAYAKASAPVDTGAYRDGLGIEEVK REHRTTIMVVGHDPKTLLVESRTGNLAKALRKARV >gi|148337404|gb|DS264455.1| GENE 255 280141 - 280539 340 132 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487547|ref|ZP_02028954.1| ## NR: gi|154487547|ref|ZP_02028954.1| hypothetical protein BIFADO_01402 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01402 [Bifidobacterium adolescentis L2-32] # 1 132 1 132 132 231 100.0 1e-59 MSLIDDLNSAVGVSAMAGATRFIRLRAKRKANPYNSAQNEPDWSVPPDELAITGALASSS SMRTPDTLDTQTASTAYLTIPDSTADVKIGDRIRADPDDGRLWEVDGFPSKDANAFTGWR PTLECRLTERKG >gi|148337404|gb|DS264455.1| GENE 256 280536 - 281051 335 171 aa, chain - ## HITS:1 COG:no KEGG:Srot_1162 NR:ns ## KEGG: Srot_1162 # Name: not_defined # Def: hypothetical protein # Organism: S.rotundus # Pathway: not_defined # 6 135 7 132 169 68 36.0 8e-11 MSEVNVIPDMIADPSAFEDDAAFRLKAAQAAIRRECGWHVMPNTALSGVINSRGGSVVRL PARHVTSIESLTDRDGNKLAYAYDPETGLVESLSGGFPAGIAAIRYEIHAGYDDAPDVQS VLISAAKRAGMSPLGLITSQSTNGSSASFDVVSLMQAEKDKLKPYKLGGLP >gi|148337404|gb|DS264455.1| GENE 257 281066 - 281413 498 115 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487549|ref|ZP_02028956.1| ## NR: gi|154487549|ref|ZP_02028956.1| hypothetical protein BIFADO_01404 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01404 [Bifidobacterium adolescentis L2-32] # 1 115 2 116 116 121 100.0 1e-26 MARQFRVIPGASAKLDPNAAVADVIFVDAKGKPTDIGGSAAAPYVLPAAAENALGGVKLA NVASAGNANAAVGVAAGDAPTKAEHDALVAAYNDLAKRVNALVAGLVAAGVVKTS >gi|148337404|gb|DS264455.1| GENE 258 281423 - 282625 1602 400 aa, chain - ## HITS:1 COG:no KEGG:Srot_1164 NR:ns ## KEGG: Srot_1164 # Name: not_defined # Def: phage capsid protein # Organism: S.rotundus # Pathway: not_defined # 9 399 20 424 426 288 43.0 2e-76 MSFNDRLAKTKAAIEAVLAKGEDNLDASDIEKLKGLNAEAHELQDSIETLDTVHKRFEGL TDNLTDTQKSGVAHQSLGDFVVKSIGEQLVKMKGVSGASIATPEWLPTRKANTDTQVTGG PSGAYGSLLTYVDPNFVEGYRRPTITNLFGVGAISGQAITYFVEGAQEGDFKTVGEGEEF GQIHYANATEHTDALSTIAGFIKESGDMITDLAFLKSDIDGRLLYSLSIKEEQQLLNGDG TGKNIKGLLHRDGIQTYTATDAGNDVAILHAQTMISTETGMMPDALVINPADYEALREKK DNNGAYLGGGPFYGINGGAVNITPSLWGMNTVVSPAVAKGTAVVGAFKRAATFYRKGGVA VEATNSNDTDFIADLVTIRAKERVALAVRIPKAFVTLTLK >gi|148337404|gb|DS264455.1| GENE 259 282622 - 283389 918 255 aa, chain - ## HITS:1 COG:AGc1747 KEGG:ns NR:ns ## COG: AGc1747 COG3740 # Protein_GI_number: 15888296 # Func_class: R General function prediction only # Function: Phage head maturation protease # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 7 191 13 185 190 74 31.0 2e-13 MNLKQLRFNVKSLDDPAGEGVFSGYASTFGNKDLQGDVIAKGAFAETLEKDYNGGAGIPI HWNHQDGKPTDIIGRTLSAVEDEKGLLISAQLDIDDNPTAQQAYDLLKDGRVHQMSIGFV PTKTAWITEKGDGPWGGHSEFQQIKLFEISVVPVAANQQAEILAVKSGRAISSANEEKLR AALASLNEVLDGIDSDNSASDEDKADDSKTGERPDDKKLDPDEGKDAEAEKAERLNVIKS ARELVTGGKDNKETK >gi|148337404|gb|DS264455.1| GENE 260 283386 - 284669 1262 427 aa, chain - ## HITS:1 COG:no KEGG:SCAB_64881 NR:ns ## KEGG: SCAB_64881 # Name: not_defined # Def: phage portal protein # Organism: S.scabiei # Pathway: not_defined # 38 409 64 433 447 260 40.0 1e-67 MGFFSRWLKKSPVSVAQKFSESPVNISQVAQIPIDWFGAGVYEREAAVRTVIDHIARNIA SMPFKVYRRQSDGDRVEDTTSPLAQLMARPSVLPGMTRYRFFYSLLCDGLLNDRWLCLLD ADKQSGRLWLRRIPVQNFTLSGNTLDEITGVQISTGQPEGSRYFKLPDPQILLDVGYSTS GIGGSPVSGTLAPLLAEAREMAEYRRAIAKNGGQIPAYISRPKEMPWLSQEAQDEFVQGM RNYKAGGNLAGGWPLLNDGMEIKTVDAFKPIDMQDIDARDKIRIDVANAFHIAPENLGFR SGTNSNIASFKEQMWNVELMPYIVAFEQSLNLLLPDALGQPDAYIEANVDAKLRGTFSEQ YQALSTATGRSFMTTNEARRILNYPKVEGGDDLVTPLNVATGGQPSPQDGGRTQNAQQNN PVNGEDQ >gi|148337404|gb|DS264455.1| GENE 261 284687 - 286300 1159 537 aa, chain - ## HITS:1 COG:no KEGG:Srot_1167 NR:ns ## KEGG: Srot_1167 # Name: not_defined # Def: terminase # Organism: S.rotundus # Pathway: not_defined # 18 530 7 493 498 252 36.0 3e-65 MVSEDLSVFGAIDDEKHGVTLPRIFTPPLRELDKTTSNGFAVIAFAEIMLHVHLYPWQCW LLVHALELLEDGSYRFRKVIVLVARQNGKTTLMGVLAAWWLFVDSNKHPDRVPPVKFLVV GAAQTLDNAKGPYSQVKEWCNPRPETDEESELVVPELADMTQKFVNTNGEEAIVLKSKAK YIVRADKNIRAKSAARVIFDELREQHNDDGWNAVSQTTKAVWSSQLWGISNAGDYRSVAL RKQVDKGRKLVDAWKQYVADGVDAAEAFANGEQDGSFGYFEWSAPDKCPVDDADAIRQAN PSLGYGPMTVASVRSDIDGMTEAAFRTEVLCQWVTADIVPYINPKLWAYGTDNASCIPAD NRVVLAVDTSADRQTTYVAAAGLRADGLPHVELIARRDGMLWVPHFLDLLRESWPSICEI AVQSKGCPAVDFIDPLTEKGWNVHLIEGFRLGACCGRFFDRVREGKLRHLPQPAIEQQVS VAVTRRLGEVEVWDRAKSALQISGLIAESEALYALETMQVEAETPKYSPSVTHFAVV >gi|148337404|gb|DS264455.1| GENE 262 286311 - 286649 394 112 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487554|ref|ZP_02028961.1| ## NR: gi|154487554|ref|ZP_02028961.1| hypothetical protein BIFADO_01409 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01409 [Bifidobacterium adolescentis L2-32] # 1 112 1 112 112 177 100.0 3e-43 MSAKFPSRNVAEALERSLKNADLKAVNSAVVAAARVLAERIDYLTFSGFVDENGKLDNVS LPTFLKYCQSLGLTVDAPAKVGRPAKPKVESKPEARKSDKVVQMEDFMKRFG >gi|148337404|gb|DS264455.1| GENE 263 286855 - 287307 -229 150 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVQPERAGPLLISASVAQWQSTRDSTDTRGRIPNRPWLHDSLRMPVIRDSASHTMRWFDS SPKHHKAVTTCQEERARPAANSKKTRPHSSHNARHSMQSAGCAACQSTTTQSRTPQMTHS ISITCSRSASIPNSNSTQQASSRATPAATA >gi|148337404|gb|DS264455.1| GENE 264 287335 - 287952 216 205 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0975 NR:ns ## KEGG: HMPREF0424_0975 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 3 146 37 185 185 67 31.0 3e-10 MLRQARIGTPAHTPSRGNAPIPIDTHAQDLIADSEAWLAEQAGKIRAAYAGYDWRKAWFA IISNRRTILDMSTAADDYAALEHISRRNETALTPEEAMVIIGTCPQCGHQATSTPQADEW TCPHCKWQGGVQAIKATRDNKLWQLEYTGKPVEVARYLSKMDIHCTSDQIRQWLTRGKLH ATPTKHKGEYVFNLGEITAMLDCHN >gi|148337404|gb|DS264455.1| GENE 265 288084 - 288251 222 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487557|ref|ZP_02028964.1| ## NR: gi|154487557|ref|ZP_02028964.1| hypothetical protein BIFADO_01413 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01413 [Bifidobacterium adolescentis L2-32] # 9 55 1 47 47 80 97.0 3e-14 MQHSGGIQVKKILEDMIIKWHQAGYALDEIAPLVPQVPKAEIAALIRQHDKETRL >gi|148337404|gb|DS264455.1| GENE 266 288224 - 288436 276 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487558|ref|ZP_02028965.1| ## NR: gi|154487558|ref|ZP_02028965.1| hypothetical protein BIFADO_01414 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01414 [Bifidobacterium adolescentis L2-32] # 1 70 1 70 70 115 100.0 1e-24 MTNTEKTIICTVITCMLIIFLTIGTCISMQWYTSTHHDFQMETVKTGDVTWACLKDRGAY IGCNTVEEYK >gi|148337404|gb|DS264455.1| GENE 267 288433 - 288585 151 50 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487559|ref|ZP_02028966.1| ## NR: gi|154487559|ref|ZP_02028966.1| hypothetical protein BIFADO_01415 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01415 [Bifidobacterium adolescentis L2-32] # 1 50 1 50 50 84 100.0 3e-15 MKHEPVIMYSREWLEHERRKAWQEGYAAGWKDQECDFPPHTTENPYLETK >gi|148337404|gb|DS264455.1| GENE 268 288582 - 289373 496 263 aa, chain - ## HITS:1 COG:no KEGG:BLIF_0859 NR:ns ## KEGG: BLIF_0859 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 144 1 146 291 139 51.0 9e-32 MARRGYVQLANGFYLNRKVRRLRRTMPSAVSAFVVMLSYCGDNLTDGFVDSDTAEFVLDI TTQELDALQQVGLIEAVDGGYVIHDYLEHNRSRQQVMAKRKREHDRYSAGSLPAEIAQTA GRIETESGQTPEHQNTRTQKKEKEEYSSSFSKEIGLNDFELVREKTHANAAIIRDYPNLD LSDAWNAFLSRHYGENRTIADWTRLWKGWCQRRAKMSGIPPSKRHVHTWKCSHVLEALGR DEETAQADEKACELADRLNKEKS >gi|148337404|gb|DS264455.1| GENE 269 289373 - 289552 138 59 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487561|ref|ZP_02028968.1| ## NR: gi|154487561|ref|ZP_02028968.1| hypothetical protein BIFADO_01417 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01417 [Bifidobacterium adolescentis L2-32] # 1 59 1 59 59 112 100.0 7e-24 MVTLDPPPDLLEIAEALDAMAKPHVGSGWANTNYTDLPCTTPRQEAIWMEFNGITRGED >gi|148337404|gb|DS264455.1| GENE 270 289546 - 289680 131 44 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487562|ref|ZP_02028969.1| ## NR: gi|154487562|ref|ZP_02028969.1| hypothetical protein BIFADO_01418 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01418 [Bifidobacterium adolescentis L2-32] # 1 44 1 44 44 77 100.0 4e-13 MSKAIRYVECAHCGETVGSYYVTCPYCGYRLVDAKQAVMMGLSW >gi|148337404|gb|DS264455.1| GENE 271 289677 - 289904 435 75 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154487563|ref|ZP_02028970.1| ## NR: gi|154487563|ref|ZP_02028970.1| hypothetical protein BIFADO_01419 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01419 [Bifidobacterium adolescentis L2-32] # 1 75 1 75 75 112 100.0 9e-24 MLDEANAYERGMDDDLTLAKRLCWDSYEWDGVDSDCVAKDEDDAWDYAGEICGYQEDFID RARDLLEVARKAVNE Prediction of potential genes in microbial genomes Time: Tue Jun 28 03:23:37 2011 Seq name: gi|148337403|gb|DS264456.1| Bifidobacterium adolescentis L2-32 Scfld0236 genomic scaffold, whole genome shotgun sequence Length of sequence - 875 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) + LSU_RRNA 1 - 813 98.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 03:23:38 2011 Seq name: gi|148337402|gb|DS264457.1| Bifidobacterium adolescentis L2-32 Scfld0237 genomic scaffold, whole genome shotgun sequence Length of sequence - 632 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) Predicted protein(s) >gi|148337402|gb|DS264457.1| GENE 1 159 - 353 75 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487954|ref|ZP_02029071.1| ## NR: gi|154487954|ref|ZP_02029071.1| hypothetical protein BIFADO_01522 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01522 [Bifidobacterium adolescentis L2-32] # 1 64 27 90 90 119 100.0 8e-26 MFFGHGVPHDGVTVLPYIVDAGVEEIMGLDLPSGCPGVVWVCFWAPGPPPHRFVSVARFD AHME Prediction of potential genes in microbial genomes Time: Tue Jun 28 03:24:46 2011 Seq name: gi|148337401|gb|DS264458.1| Bifidobacterium adolescentis L2-32 Scfld0238 genomic scaffold, whole genome shotgun sequence Length of sequence - 213084 bp Number of predicted genes - 198, with homology - 181 Number of transcription units - 95, operones - 33 average op.length - 4.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 6 - 3668 4858 ## COG0366 Glycosidases + Term 3835 - 3870 1.4 - Term 3681 - 3745 19.0 2 2 Tu 1 . - CDS 3746 - 3949 191 ## + Prom 3755 - 3814 4.2 3 3 Tu 1 . + CDS 3909 - 4826 437 ## COG1216 Predicted glycosyltransferases + Prom 5148 - 5207 4.3 4 4 Op 1 1/0.000 + CDS 5399 - 6454 531 ## COG2244 Membrane protein involved in the export of O-antigen and teichoic acid + Term 6499 - 6543 0.0 + Prom 6527 - 6586 7.1 5 4 Op 2 1/0.000 + CDS 6702 - 7958 1593 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 6 4 Op 3 . + CDS 7980 - 9161 566 ## COG0438 Glycosyltransferase + Prom 9852 - 9911 1.7 7 5 Tu 1 . + CDS 9936 - 10223 244 ## gi|154487976|ref|ZP_02029093.1| hypothetical protein BIFADO_01544 + Term 10375 - 10425 2.1 + Prom 10452 - 10511 4.5 8 6 Op 1 . + CDS 10755 - 10820 104 ## 9 6 Op 2 . + CDS 10823 - 11359 197 ## COG0438 Glycosyltransferase + Prom 12348 - 12407 5.7 10 7 Tu 1 . + CDS 12447 - 12563 61 ## gi|154487979|ref|ZP_02029096.1| hypothetical protein BIFADO_01547 + Prom 12655 - 12714 5.3 11 8 Tu 1 . + CDS 12734 - 14002 1065 ## gi|154487980|ref|ZP_02029097.1| hypothetical protein BIFADO_01548 12 9 Tu 1 . - CDS 13937 - 14125 73 ## - Prom 14150 - 14209 3.4 - Term 14645 - 14687 5.5 13 10 Op 1 7/0.000 - CDS 14724 - 18587 5108 ## COG0366 Glycosidases 14 10 Op 2 . - CDS 18675 - 23249 5820 ## COG0366 Glycosidases - Prom 23307 - 23366 3.7 + Prom 23266 - 23325 3.8 15 11 Op 1 . + CDS 23361 - 23567 134 ## 16 11 Op 2 . + CDS 23467 - 23703 164 ## - Term 23489 - 23517 -0.9 17 12 Tu 1 . - CDS 23746 - 24333 613 ## COG0394 Protein-tyrosine-phosphatase - Prom 24411 - 24470 3.4 + Prom 24211 - 24270 1.8 18 13 Tu 1 . + CDS 24302 - 24514 65 ## + Term 24558 - 24593 0.2 19 14 Tu 1 . - CDS 24472 - 25707 1078 ## COG3177 Uncharacterized conserved protein - Prom 25752 - 25811 4.8 20 15 Tu 1 . - CDS 25912 - 27087 1150 ## BAD_1391 hypothetical protein 21 16 Tu 1 . - CDS 27312 - 28889 1890 ## COG0477 Permeases of the major facilitator superfamily - Prom 29024 - 29083 1.5 22 17 Tu 1 . + CDS 29201 - 30505 1506 ## COG2199 FOG: GGDEF domain - Term 30377 - 30421 -0.6 23 18 Tu 1 . - CDS 30620 - 31903 1472 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family + Prom 31870 - 31929 1.7 24 19 Op 1 . + CDS 32069 - 32923 953 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 25 19 Op 2 . + CDS 32916 - 33689 673 ## BAD_1397 hypothetical protein + Term 33757 - 33814 8.3 - Term 34069 - 34105 -0.9 26 20 Tu 1 . - CDS 34117 - 35259 474 ## BAD_1398 hypothetical protein - Term 35740 - 35799 5.1 27 21 Op 1 1/0.000 - CDS 35997 - 37070 1298 ## COG1609 Transcriptional regulators 28 21 Op 2 . - CDS 37115 - 39250 2679 ## COG1874 Beta-galactosidase 29 21 Op 3 . - CDS 39273 - 41528 1801 ## COG1874 Beta-galactosidase 30 21 Op 4 38/0.000 - CDS 41570 - 42403 1254 ## COG0395 ABC-type sugar transport system, permease component 31 21 Op 5 35/0.000 - CDS 42400 - 43362 1184 ## COG1175 ABC-type sugar transport systems, permease components 32 21 Op 6 . - CDS 43464 - 44714 2018 ## COG1653 ABC-type sugar transport system, periplasmic component 33 21 Op 7 . - CDS 44763 - 44930 103 ## - Prom 45105 - 45164 2.9 - Term 45145 - 45195 13.1 34 22 Op 1 16/0.000 - CDS 45292 - 45996 943 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis - Term 46049 - 46097 3.0 35 22 Op 2 . - CDS 46135 - 47010 1249 ## COG0214 Pyridoxine biosynthesis enzyme - Prom 47040 - 47099 2.9 36 23 Tu 1 . + CDS 47137 - 47277 181 ## 37 24 Tu 1 . - CDS 47434 - 51462 3378 ## COG1132 ABC-type multidrug transport system, ATPase and permease components - Prom 51562 - 51621 2.1 + Prom 51910 - 51969 2.0 38 25 Tu 1 . + CDS 52106 - 53929 2361 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) + Term 53954 - 54017 5.1 - Term 53940 - 54005 14.5 39 26 Op 1 5/0.000 - CDS 54121 - 55635 2370 ## COG2160 L-arabinose isomerase 40 26 Op 2 3/0.000 - CDS 55689 - 56381 880 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 41 26 Op 3 . - CDS 56425 - 58047 2090 ## COG1070 Sugar (pentulose and hexulose) kinases - Prom 58120 - 58179 3.3 - Term 58146 - 58172 -0.6 42 27 Tu 1 . - CDS 58212 - 59330 1056 ## COG1609 Transcriptional regulators - Prom 59365 - 59424 3.2 43 28 Op 1 . - CDS 59441 - 60868 1561 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation 44 28 Op 2 13/0.000 - CDS 60865 - 61869 1294 ## COG0083 Homoserine kinase - Prom 61905 - 61964 2.9 45 28 Op 3 3/0.000 - CDS 62041 - 63357 1853 ## COG0460 Homoserine dehydrogenase - Prom 63406 - 63465 2.8 - Term 63434 - 63493 17.2 46 29 Op 1 4/0.000 - CDS 63516 - 65090 2063 ## COG0019 Diaminopimelate decarboxylase 47 29 Op 2 . - CDS 65124 - 66962 2463 ## COG0018 Arginyl-tRNA synthetase 48 29 Op 3 . - CDS 66946 - 68430 1819 ## COG0833 Amino acid transporters - Term 68575 - 68619 7.3 49 30 Tu 1 . - CDS 68692 - 69081 651 ## COG0251 Putative translation initiation inhibitor, yjgF family - Prom 69177 - 69236 2.8 - TRNA 69357 - 69432 74.4 # Arg CCG 0 0 - Term 69310 - 69358 10.1 50 31 Tu 1 . - CDS 69578 - 70546 1371 ## COG3118 Thioredoxin domain-containing protein - Term 70551 - 70607 18.1 51 32 Op 1 . - CDS 70679 - 71677 1185 ## BAD_1422 hypothetical protein 52 32 Op 2 . - CDS 71677 - 72807 945 ## BAD_1423 hypothetical protein 53 33 Tu 1 . + CDS 72888 - 73844 1250 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 + Term 73868 - 73898 3.0 - Term 73855 - 73885 3.0 54 34 Tu 1 . - CDS 73893 - 74597 1057 ## COG1637 Predicted nuclease of the RecB family - Term 74660 - 74731 25.1 55 35 Op 1 . - CDS 74747 - 75025 287 ## BAD_1426 F0F1 ATP synthase subunit epsilon 56 35 Op 2 42/0.000 - CDS 75025 - 76509 1882 ## COG0055 F0F1-type ATP synthase, beta subunit 57 35 Op 3 42/0.000 - CDS 76518 - 77438 1123 ## COG0224 F0F1-type ATP synthase, gamma subunit 58 35 Op 4 41/0.000 - CDS 77442 - 79070 1968 ## COG0056 F0F1-type ATP synthase, alpha subunit 59 35 Op 5 38/0.000 - CDS 79142 - 79969 816 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 60 35 Op 6 37/0.000 - CDS 79999 - 80520 763 ## COG0711 F0F1-type ATP synthase, subunit b 61 35 Op 7 40/0.000 - CDS 80580 - 80807 444 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 62 35 Op 8 . - CDS 80864 - 81673 987 ## COG0356 F0F1-type ATP synthase, subunit a - Prom 81696 - 81755 2.2 + Prom 81722 - 81781 2.4 63 36 Tu 1 . + CDS 81811 - 82017 63 ## + Term 82234 - 82279 0.5 - Term 82077 - 82123 8.1 64 37 Tu 1 . - CDS 82166 - 83200 1629 ## COG1897 Homoserine trans-succinylase - Prom 83413 - 83472 76.3 + TRNA 83396 - 83469 79.0 # Met CAT 0 0 + Prom 83396 - 83455 76.8 65 38 Op 1 . + CDS 83567 - 84391 566 ## COG0582 Integrase 66 38 Op 2 . + CDS 84441 - 84713 434 ## COG2929 Uncharacterized protein conserved in bacteria 67 38 Op 3 . + CDS 84697 - 84981 373 ## BLD_1133 hypothetical protein + Term 84999 - 85049 16.0 68 39 Op 1 . - CDS 85047 - 85310 451 ## Blon_1572 hypothetical protein - Term 85333 - 85367 -0.9 69 39 Op 2 . - CDS 85398 - 86630 1476 ## BLD_1135 phage lysin-like lysozyme M1 - Term 86655 - 86693 8.1 70 40 Op 1 . - CDS 86694 - 87011 524 ## BLD_1136 hypothetical protein 71 40 Op 2 . - CDS 87008 - 87142 170 ## BLD_1137 hypothetical protein 72 40 Op 3 . - CDS 87139 - 87474 551 ## BLD_1138 hypothetical protein 73 40 Op 4 . - CDS 87300 - 88940 775 ## COG3344 Retron-type reverse transcriptase 74 40 Op 5 . - CDS 88951 - 90531 1776 ## BLD_1140 hypothetical protein 75 40 Op 6 . - CDS 90548 - 91270 918 ## BLD_1141 hypothetical protein 76 40 Op 7 . - CDS 91257 - 91424 276 ## BLD_1142 hypothetical protein 77 40 Op 8 . - CDS 91424 - 92026 546 ## BLD_1143 phage transcriptional regulator 78 40 Op 9 . - CDS 92035 - 95835 4803 ## BLD_1144 phage tail fiber protein 79 40 Op 10 . - CDS 95846 - 96628 1019 ## BLD_1145 hypothetical protein 80 40 Op 11 . - CDS 96648 - 99713 3543 ## COG5412 Phage-related protein 81 40 Op 12 . - CDS 99715 - 100107 433 ## gi|154488058|ref|ZP_02029175.1| hypothetical protein BIFADO_01628 82 40 Op 13 . - CDS 100119 - 100439 487 ## BLD_1147 hypothetical protein 83 40 Op 14 . - CDS 100493 - 101080 914 ## BLD_1148 phage major tail protein 84 40 Op 15 . - CDS 101112 - 101477 284 ## BLD_1150 hypothetical protein 85 40 Op 16 . - CDS 101479 - 101736 485 ## BLD_1151 hypothetical protein 86 40 Op 17 . - CDS 101748 - 102083 438 ## BLD_1152 hypothetical protein 87 40 Op 18 . - CDS 102080 - 102529 665 ## BLD_1153 hypothetical protein 88 40 Op 19 . - CDS 102541 - 102906 413 ## BLD_1154 hypothetical protein 89 40 Op 20 . - CDS 102906 - 103811 1351 ## BLD_1155 phage major head protein 90 40 Op 21 . - CDS 103842 - 104375 759 ## BLD_1156 phage helicase - Term 104460 - 104495 9.5 91 41 Op 1 . - CDS 104501 - 104731 400 ## gi|154488068|ref|ZP_02029185.1| hypothetical protein BIFADO_01638 92 41 Op 2 . - CDS 104728 - 106287 1800 ## BLD_1157 hypothetical protein 93 41 Op 3 . - CDS 106238 - 107710 1702 ## BLD_1158 phage portal protein 94 41 Op 4 . - CDS 107713 - 109146 1364 ## BLD_1159 phage terminase large subunit 95 41 Op 5 . - CDS 109130 - 109318 142 ## BLD_1160 hypothetical protein - Term 109441 - 109492 1.5 96 42 Tu 1 . - CDS 109508 - 109801 222 ## BLD_1161 hypothetical protein - TRNA 110008 - 110105 66.8 # Ser GCT 0 0 - Term 110108 - 110141 3.5 97 43 Tu 1 . - CDS 110195 - 111037 621 ## BLD_1162 hypothetical protein - Prom 111062 - 111121 1.7 98 44 Op 1 . - CDS 111184 - 111411 374 ## BLD_1163 hypothetical protein 99 44 Op 2 . - CDS 111408 - 111641 276 ## BLD_1164 hypothetical protein 100 44 Op 3 . - CDS 111638 - 111868 114 ## BLD_1165 WhiB family transcriptional regulator 101 44 Op 4 . - CDS 111865 - 112116 387 ## gi|154488080|ref|ZP_02029197.1| hypothetical protein BIFADO_01651 102 44 Op 5 . - CDS 112116 - 112331 321 ## gi|154488081|ref|ZP_02029198.1| hypothetical protein BIFADO_01652 103 44 Op 6 . - CDS 112328 - 112540 279 ## gi|154488082|ref|ZP_02029199.1| hypothetical protein BIFADO_01653 104 44 Op 7 . - CDS 112573 - 112902 519 ## BLD_1168 hypothetical protein 105 44 Op 8 . - CDS 112899 - 113117 334 ## gi|154488084|ref|ZP_02029201.1| hypothetical protein BIFADO_01655 106 44 Op 9 . - CDS 113114 - 113299 71 ## gi|154488085|ref|ZP_02029202.1| hypothetical protein BIFADO_01656 107 44 Op 10 . - CDS 113296 - 113499 192 ## gi|154488086|ref|ZP_02029203.1| hypothetical protein BIFADO_01657 108 44 Op 11 . - CDS 113496 - 113801 380 ## gi|154488087|ref|ZP_02029204.1| hypothetical protein BIFADO_01658 109 44 Op 12 . - CDS 113798 - 113962 244 ## gi|154488088|ref|ZP_02029205.1| hypothetical protein BIFADO_01659 110 44 Op 13 . - CDS 114012 - 114194 132 ## gi|154488089|ref|ZP_02029206.1| hypothetical protein BIFADO_01660 111 44 Op 14 . - CDS 114191 - 114424 279 ## gi|154488090|ref|ZP_02029207.1| hypothetical protein BIFADO_01661 112 44 Op 15 . - CDS 114421 - 115059 760 ## BLD_1173 oligoribonuclease 113 44 Op 16 . - CDS 115056 - 115454 205 ## BLD_1174 hypothetical protein 114 44 Op 17 . - CDS 115451 - 116506 991 ## BLD_1175 hypothetical protein 115 44 Op 18 . - CDS 116532 - 116948 606 ## BLD_1176 hypothetical protein 116 44 Op 19 . - CDS 116962 - 117498 637 ## COG0629 Single-stranded DNA-binding protein 117 44 Op 20 . - CDS 117498 - 117980 706 ## BLD_1178 hypothetical protein 118 44 Op 21 . - CDS 117977 - 118216 202 ## BLD_1179 hypothetical protein 119 45 Op 1 . - CDS 118561 - 118719 212 ## gi|154488098|ref|ZP_02029215.1| hypothetical protein BIFADO_01669 120 45 Op 2 . - CDS 118716 - 118907 357 ## BLD_1181 hypothetical protein 121 45 Op 3 . - CDS 118918 - 119817 1194 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs 122 45 Op 4 . - CDS 119912 - 120322 322 ## gi|154488102|ref|ZP_02029219.1| hypothetical protein BIFADO_01673 123 45 Op 5 . - CDS 120319 - 120519 194 ## BLD_1185 hypothetical protein 124 45 Op 6 . - CDS 120516 - 120800 217 ## BLD_1186 phage repressor - Prom 120918 - 120977 2.3 125 46 Tu 1 . + CDS 120928 - 121299 254 ## BLD_1187 Xre family transcriptional regulator + Term 121365 - 121406 9.7 + Prom 121535 - 121594 3.6 126 47 Tu 1 . + CDS 121634 - 123892 2527 ## COG0366 Glycosidases + Term 123956 - 124000 11.5 + Prom 124235 - 124294 2.4 127 48 Tu 1 . + CDS 124331 - 124825 815 ## COG0221 Inorganic pyrophosphatase + Term 124851 - 124885 8.3 + Prom 124911 - 124970 2.1 128 49 Tu 1 . + CDS 125140 - 125706 787 ## COG1971 Predicted membrane protein + Term 125729 - 125765 6.5 - Term 125717 - 125753 7.3 129 50 Tu 1 . - CDS 125774 - 126559 977 ## BAD_1446 hypothetical protein - Prom 126651 - 126710 3.8 + Prom 126550 - 126609 4.2 130 51 Tu 1 . + CDS 126717 - 127475 997 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 127494 - 127524 1.1 + Prom 127496 - 127555 2.0 131 52 Op 1 . + CDS 127664 - 128329 550 ## COG0177 Predicted EndoIII-related endonuclease 132 52 Op 2 . + CDS 128419 - 129966 1819 ## COG0747 ABC-type dipeptide transport system, periplasmic component + Prom 129978 - 130037 1.8 133 53 Tu 1 . + CDS 130081 - 132810 3887 ## COG0525 Valyl-tRNA synthetase 134 54 Tu 1 . - CDS 133290 - 135221 1871 ## BAD_1451 hypothetical protein - Prom 135259 - 135318 2.2 135 55 Op 1 . - CDS 135331 - 135744 562 ## COG1605 Chorismate mutase 136 55 Op 2 . - CDS 135793 - 136269 475 ## COG1522 Transcriptional regulators 137 55 Op 3 . - CDS 136256 - 136420 67 ## - Prom 136462 - 136521 3.1 - Term 136566 - 136608 11.1 138 56 Tu 1 . - CDS 136641 - 138653 2448 ## COG1158 Transcription termination factor - Prom 138848 - 138907 2.3 - Term 138830 - 138863 4.5 139 57 Tu 1 . - CDS 138987 - 140576 2224 ## COG1232 Protoporphyrinogen oxidase - Prom 140602 - 140661 2.5 - Term 140687 - 140721 -0.9 140 58 Op 1 . - CDS 140749 - 141060 538 ## HMPREF0424_0108 hypothetical protein 141 58 Op 2 . - CDS 141057 - 142127 1132 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 142 58 Op 3 . - CDS 142130 - 142336 140 ## 143 58 Op 4 21/0.000 - CDS 142397 - 143893 2275 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) 144 58 Op 5 31/0.000 - CDS 143919 - 145454 484 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 145 58 Op 6 . - CDS 145456 - 145752 448 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 146 59 Tu 1 . - CDS 145936 - 146799 809 ## COG0566 rRNA methylases 147 60 Op 1 . - CDS 146937 - 147608 874 ## BAD_1461 hypothetical protein 148 60 Op 2 . - CDS 147678 - 149012 1574 ## COG1322 Uncharacterized protein conserved in bacteria 149 61 Tu 1 . + CDS 149156 - 150091 680 ## COG2217 Cation transport ATPase + Term 150119 - 150146 -0.8 - Term 149852 - 149889 8.2 150 62 Tu 1 . - CDS 150095 - 152812 1741 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 - Prom 153044 - 153103 2.9 151 63 Op 1 . - CDS 153115 - 153936 841 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 152 63 Op 2 . - CDS 154031 - 154582 366 ## BAD_1466 hypothetical protein - Prom 154747 - 154806 3.5 - Term 154822 - 154870 15.0 153 64 Op 1 . - CDS 154905 - 156488 1812 ## BAD_1467 cell surface protein fimafimbrial subunit - Prom 156560 - 156619 1.6 154 64 Op 2 . - CDS 156651 - 159104 1893 ## BAD_1468 hypothetical protein 155 65 Op 1 . - CDS 159303 - 160592 614 ## COG3764 Sortase (surface protein transpeptidase) 156 65 Op 2 . - CDS 160561 - 160632 75 ## - Term 160685 - 160739 1.5 157 66 Tu 1 . - CDS 160867 - 161685 814 ## COG0325 Predicted enzyme with a TIM-barrel fold - Prom 161853 - 161912 3.0 - Term 161886 - 161937 3.3 158 67 Tu 1 . - CDS 161974 - 162393 443 ## BAD_1472 transposase 159 68 Tu 1 . + CDS 162765 - 163922 886 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 160 69 Tu 1 . - CDS 164018 - 164920 657 ## BAD_1474 membrane protein 161 70 Tu 1 . - CDS 165096 - 165827 1046 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - TRNA 166017 - 166090 86.5 # Lys CTT 0 0 + Prom 166225 - 166284 2.6 162 71 Tu 1 . + CDS 166489 - 169569 3432 ## BBPR_0266 hypothetical protein + Term 169598 - 169635 4.7 - Term 169586 - 169623 8.5 163 72 Op 1 27/0.000 - CDS 169710 - 170156 725 ## PROTEIN SUPPORTED gi|119026498|ref|YP_910343.1| 50S ribosomal protein L9 164 72 Op 2 21/0.000 - CDS 170176 - 170424 410 ## PROTEIN SUPPORTED gi|119026499|ref|YP_910344.1| 30S ribosomal protein S18 165 72 Op 3 24/0.000 - CDS 170511 - 171170 764 ## COG0629 Single-stranded DNA-binding protein 166 72 Op 4 . - CDS 171213 - 171503 482 ## PROTEIN SUPPORTED gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 - Prom 171581 - 171640 2.7 - Term 171738 - 171773 -0.5 167 73 Tu 1 . - CDS 171781 - 172794 1372 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 172833 - 172892 3.8 - Term 172916 - 172979 15.1 168 74 Op 1 4/0.000 - CDS 173021 - 174013 1433 ## COG0524 Sugar kinases, ribokinase family - Prom 174040 - 174099 6.1 169 74 Op 2 2/0.000 - CDS 174125 - 175594 2140 ## COG0477 Permeases of the major facilitator superfamily 170 74 Op 3 . - CDS 175721 - 176677 1401 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Prom 176849 - 176908 4.6 171 75 Tu 1 . + CDS 176676 - 176870 165 ## gi|154488168|ref|ZP_02029285.1| hypothetical protein BIFADO_01740 172 76 Tu 1 . - CDS 176953 - 178011 921 ## COG1609 Transcriptional regulators - Prom 178098 - 178157 4.0 + Prom 178111 - 178170 4.1 173 77 Tu 1 . + CDS 178213 - 178686 641 ## BDP_2028 hypothetical protein - Term 179161 - 179197 -0.6 174 78 Op 1 . - CDS 179303 - 180325 853 ## COG1088 dTDP-D-glucose 4,6-dehydratase 175 78 Op 2 . - CDS 180322 - 181197 158 ## BAD_1496 hypothetical protein + Prom 181677 - 181736 2.4 176 79 Op 1 . + CDS 181810 - 184443 874 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 177 79 Op 2 . + CDS 184495 - 185739 1050 ## COG1004 Predicted UDP-glucose 6-dehydrogenase 178 80 Tu 1 . - CDS 185809 - 187695 1530 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases - Prom 187734 - 187793 2.4 + Prom 187691 - 187750 2.1 179 81 Op 1 26/0.000 + CDS 187822 - 188655 1134 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 180 81 Op 2 . + CDS 188659 - 189903 1268 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component + Term 190141 - 190179 -0.8 181 82 Op 1 . - CDS 189928 - 190053 67 ## 182 82 Op 2 . - CDS 190046 - 190279 90 ## - Term 190398 - 190433 -0.8 183 83 Tu 1 . - CDS 190466 - 190666 59 ## - Prom 190781 - 190840 2.0 - Term 190917 - 190954 -0.9 184 84 Tu 1 . - CDS 190961 - 191194 102 ## - Prom 191334 - 191393 3.7 + Prom 192171 - 192230 2.2 185 85 Tu 1 . + CDS 192329 - 194278 2071 ## COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases + Term 194279 - 194329 16.2 + Prom 194364 - 194423 2.6 186 86 Tu 1 . + CDS 194466 - 195653 1115 ## COG3328 Transposase and inactivated derivatives 187 87 Op 1 . - CDS 195654 - 197390 1094 ## Blon_2383 hypothetical protein 188 87 Op 2 . - CDS 197430 - 198557 817 ## Blon_2382 hypothetical protein + Prom 198536 - 198595 4.5 189 88 Tu 1 . + CDS 198703 - 199647 769 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 190 89 Tu 1 . + CDS 200121 - 200999 829 ## COG3328 Transposase and inactivated derivatives 191 90 Tu 1 . - CDS 201104 - 203698 2437 ## COG2730 Endoglucanase - Prom 203866 - 203925 3.8 + Prom 204211 - 204270 2.3 192 91 Op 1 . + CDS 204319 - 204621 201 ## BAD_1512 putative cell wall-anchored protein 193 91 Op 2 . + CDS 204618 - 206279 1226 ## BAD_1513 putative sialic acid-specific acetylesterase + Term 206347 - 206399 2.2 + Prom 206450 - 206509 1.9 194 91 Op 3 . + CDS 206571 - 207464 761 ## BAD_1514 hypothetical protein + Term 207502 - 207557 15.2 - Term 207613 - 207644 0.6 195 92 Tu 1 . - CDS 207717 - 208313 193 ## gi|225352514|ref|ZP_03743537.1| hypothetical protein BIFPSEUDO_04137 196 93 Tu 1 . + CDS 208614 - 208805 68 ## gi|154488193|ref|ZP_02029310.1| hypothetical protein BIFADO_01765 - TRNA 208673 - 208760 59.3 # Ser GGA 0 0 + Prom 208908 - 208967 2.1 197 94 Tu 1 . + CDS 209001 - 209297 154 ## - 5S_RRNA 209123 - 209239 100.0 # AP009256 [R:1549800..1549916] # 5S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 209591 - 212511 98.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - Term 212599 - 212654 6.4 198 95 Tu 1 . - CDS 212763 - 212957 75 ## gi|154486318|ref|ZP_02027725.1| hypothetical protein BIFADO_00125 Predicted protein(s) >gi|148337401|gb|DS264458.1| GENE 1 6 - 3668 4858 1220 aa, chain + ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 1 552 47 571 660 303 37.0 1e-81 MKDGATLHAFEWSFKTIMENIPDIAKAGYTSIQTEPIVKIKDNRKLGTGNWYLNWYYVYQ PTDMSIGNYVVGSEDEFKEMCKLAHQYGLRIIVDSVSNHFTSDFDVIEGKWKNKAYYHED KQISDYNNREDCTQHKLSGLWDLNTQDDTVTEGMHDLLAQTVADGADGFRYDAAKHIELS DEVFGGKQSHYWDTILQNGAQYQYGEVLEDANVRESDYANLFNSSSPRGGGITDSSYGHE VRNAVQFKNLGASHFTSHSKVTEDKTVNWVESHDNFANGEANIPQELSDEWIKYGWAGVT AQKNGMSLFFDRPYKDGGTYGTGGVGTYGNGSGPFTENSKLGDAGSDLWKDPEVVAVNHF RNAMVGEASNVSNCGDDNCLMVERYAGSAAQDGMVVANANASDKNLAGTSTKLANGTYTD EVTGSTITVSGGKVTSGTVKGQSIAAFSNKTRSGKVSTAEAYPNKGTIPGESKTITLRSY QSTNTTYSTSDGQSGSFKDGDTIEIGSKAKSDEVVTVTVKGTGSDGEAIKHTYSYTKYGD PTYDPSDGTSSPCDKYCMEYMEKNGLDPDCYIDAKEPCHPRNVTVTAIKVSGDTSMDLAS TKSVQLKADVTTDPAGKRPSVTWTSSDTSVATVDSKGKVSGLKAGTVKITATAGTNKKSD SITITITGVKPEVSNVIYATKPSGWSKIYAYVYNDTTSKNNGNWPGVEMTQLTADDSCAK AGTYKYEVPDLGEGKYRVIFTNGSGAQTPGASQPGIEFSGKVSWDGSSSTVTAVNCNIQQ PIPVESVTISGNGVSDGKLSLKVGASAQLTATVKPDNATNKTVSWDSSDNSVAKVSDGKV TALKAGTATITATAGDISSLITVTVADVPVPVTSVSVSGDGVSDGKLSLKSGASVQLTAT VKPDNATDRKVTWTSSDSSVANVMGTGVVTAGSKAGKATVTATAGGVSASVEVTVEAQDP YAELDALAKAHASDLEDGTYAVSTALKDGMVLDVADGSRKDGANVRLWSSNGTKAQQWTV SHDSKGYVTLRNVNSGKALDVKDGKAANGSNVHQYAPNSYRSQKWVAVRSGSVYKLVSAL SPSMALDVKDGKAANGSNVQIYTANGYRSQQWTFKTVAQPLKSATVWYRPSSAQSRVRVQ WRVYGSPDTTGGMEMTQACGGWWKATVPSAGSTRVGLSFSYGSTTDDNGGKLYDVKGESA AVSGGQAVTDVTPNCAVTNK >gi|148337401|gb|DS264458.1| GENE 2 3746 - 3949 191 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTIPSVFSVISIFIPTLYLKLNQKNRIPAIRGRTYRPPLSRSNRAFWNITPIHRQTIMGK SAFYLPL >gi|148337401|gb|DS264458.1| GENE 3 3909 - 4826 437 305 aa, chain + ## HITS:1 COG:CAC2312 KEGG:ns NR:ns ## COG: CAC2312 COG1216 # Protein_GI_number: 15895579 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Clostridium acetobutylicum # 12 131 9 125 303 80 40.0 5e-15 MKMDITEKTLGIVILNYLNYKDTLECVKSLLGQSYKAFYIVIVDNHSANESYQVLRNKFS GVENISVVQTSANLGFAKGNNQGIKILKEMGIRKVLVSNNDVIFFDKYYLEHLVDLKYKS CVGMIGTAIINADGGNHNPVPVSNLTYGRFRMYEIAASFKCWSTRYVPGIKKLYDFKHSL VKKETSSQHIDGSRTHILNPEFEMLHGSVLYFTENFLNEYDGFYPGTFLYVEEDILNLLC QRTGMRQMYVSSIVVKHKEDGSSDMAWENRDKRKMKSHYQRQSLRCLDSLRRKPVDQLKS AFLQC >gi|148337401|gb|DS264458.1| GENE 4 5399 - 6454 531 351 aa, chain + ## HITS:1 COG:FN1682 KEGG:ns NR:ns ## COG: FN1682 COG2244 # Protein_GI_number: 19705003 # Func_class: R General function prediction only # Function: Membrane protein involved in the export of O-antigen and teichoic acid # Organism: Fusobacterium nucleatum # 1 246 133 381 486 89 26.0 1e-17 MDWVNNVYEDFFYITIRYIIFQCLALVGMFIFVHGPNDYLAYAFCMILSVVGGNLCNIAY IRKYVHVSLTKKIDMGRHLKPILVLFSNSVATILYITAGTTILGILMSNTEVGIYSVPVK IYTIIKNIINAVIMVTVPRVSFYIGQQHIKESKLLLDKTLNIIVVLVFPAMIGLAFLAEP IITIISGAEFSSGAVSLRLLCVALLFGNLACFFANAVLLPFKREKFFLQATCIAAICNVA LNFMLIPLCGIKGPAIATIVSEFIVMVYSAFKAREVYIPSTFLKNLGQTSIGCVTICLIC YVTRMLITKPFFDILISVTLSLIAYGLTMILMRNEIIRSLVRMIISVVRDK >gi|148337401|gb|DS264458.1| GENE 5 6702 - 7958 1593 418 aa, chain + ## HITS:1 COG:STM2080 KEGG:ns NR:ns ## COG: STM2080 COG1004 # Protein_GI_number: 16765410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Salmonella typhimurium LT2 # 7 418 1 388 388 494 60.0 1e-139 MHRFDSLKIAVAGTGYVGLSLATLLSQHHQVTAVDIIPEKVEKINKRISPIQDEYIEKYF AEKELDLTATLDGEKAYADADFVIIAAPTNYDSRKNFFDTSAVEAVIDLVMKVNPDAIMV IKSTIPVGYTKSIRERTGSRNIIFSPEFLRESKALYDNLYPSRIIVGTDLDDERLADAAH TFAALLQEGAIEKDIRTLFMGFTEAEAVKLFANTYLALRVSYFNELDTYAESKGLDTRQI IDGVCLDPRIGTHYNNPSFGYGGYCLPKDTKQLLANYQDVPENLIEAIVESNRTRKEFIA DRVLAKAGSYGYDENNEYDKGAEKPVTVGVYRLTMKSNSDNFRQSSIQGVMKRVKAKGAT VIVYEPTLENGATFFGSEVVNDLDEFKNRSNVIVANRYNSCLDDVQDKVYTRDLFKRD >gi|148337401|gb|DS264458.1| GENE 6 7980 - 9161 566 393 aa, chain + ## HITS:1 COG:SPy0786 KEGG:ns NR:ns ## COG: SPy0786 COG0438 # Protein_GI_number: 15674830 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pyogenes M1 GAS # 7 388 1 380 384 383 50.0 1e-106 MLNDSSVQHVFIVGSKGIPGNYGGYETFVDKLTEYHQNNPNLKYHVACKAKDTKTFEYHN ADCFDVKVPSIGPAQAIYYDVAALNQCVRYIKRHNIQHPIVYILACRIGPFAAHFQRVIH KLGGKLYINPDGHEWMRAKWSAPVRKYWKISEQLMTKHCDLLICDSKNIEDYIHDEYGKY NPKTTFISYGAETRKSKLADDDPKLIAWYKEKGLSPKSYYLVVGRFVPENNYETMIREFM KSHSKRDFALITNVSDKFLEELKEKTHFDQDSRIKFVGTVYDKELLMKIRENAYGYFHGH EVGGTNPSLLEALGSTDLNLLLDVGFNREVAEDSALYWTKQSGNLASLIDWADGMNADEI SELGKKASLRIVEAYSWQHIADEYESRFSLMSE >gi|148337401|gb|DS264458.1| GENE 7 9936 - 10223 244 95 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487976|ref|ZP_02029093.1| ## NR: gi|154487976|ref|ZP_02029093.1| hypothetical protein BIFADO_01544 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01544 [Bifidobacterium adolescentis L2-32] # 1 95 233 327 327 172 100.0 6e-42 MKTDSLESLSAYYSFAAIAYIVICQNGVVRNNDISYTEKLKQIRSISTEEWVIDLFHNIK KINIPFSRKLIIFSSKIGLYSMMVIAATIRKKLKK >gi|148337401|gb|DS264458.1| GENE 8 10755 - 10820 104 21 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLILIDFYLITQFVKKLEHN >gi|148337401|gb|DS264458.1| GENE 9 10823 - 11359 197 178 aa, chain + ## HITS:1 COG:SP0353 KEGG:ns NR:ns ## COG: SP0353 COG0438 # Protein_GI_number: 15900282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Streptococcus pneumoniae TIGR4 # 1 160 191 352 372 105 36.0 5e-23 MGNSFTIINTGRFTEQKNQSFILDIVDVLKKDRHDVKLLLLGDGPLKGLYKSKVRQLGLS DIVLFLGVKPNVQDYLSAADCYLMPSLYEGLPVAGIEAECSGLPCFFSDDITEEVRLSDQ AHFLPLSLGEKGWASEVMKYDFGESRLKMADSVKNAGYDIQDVAKSMGAFYLLKAQGR >gi|148337401|gb|DS264458.1| GENE 10 12447 - 12563 61 38 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487979|ref|ZP_02029096.1| ## NR: gi|154487979|ref|ZP_02029096.1| hypothetical protein BIFADO_01547 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01547 [Bifidobacterium adolescentis L2-32] # 1 38 271 308 308 77 97.0 3e-13 MGRRIRKSYLPSKVLLKTYLKERIKCSIILCMTFFNLY >gi|148337401|gb|DS264458.1| GENE 11 12734 - 14002 1065 422 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154487980|ref|ZP_02029097.1| ## NR: gi|154487980|ref|ZP_02029097.1| hypothetical protein BIFADO_01548 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01865 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01865 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01548 [Bifidobacterium adolescentis L2-32] # 299 422 1 124 124 200 100.0 2e-49 MFFLSTSDRRKLFMQLPLSYFFAEVYLITIIILNALVERKSSSSALLFILLVGVMAALSI TAEKKLLIASLTFISLMQVFYSLLNYSSTRIFLFLLLATVFFYIIKAFRFKYGDSLLKNI LYVGVLHVILCFFETFTHYNPFISLLGIEAFNGDSTSSYRATGITAHPITGSVFSISIAI IALGFYNQSRNKRYLLLSTLSLVTTVLMQTRSVYVVMMCTLLILLAIKKHKKVSEIRIRI FPVLLFIFLAVIFFSISVSPNSYLYSMTFGRFSTLLDSGSFLQRSGSISFLLQYLSKKMT LATFLGNGFGSLAHYLNVNNIYFVSKDFFTVDNQYVTAFFEIGILGYMLFLILLSLILIP GFKTMHMSDISIVRMIGTPQAMCIALLFSVFFFECYDKPVVLCMLMLALAFCSSFREKYD MR >gi|148337401|gb|DS264458.1| GENE 12 13937 - 14125 73 62 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILPLGFQSRFALLNEKAHKAQTTSSYIKGKIRKYAGFWALSTHIIFFPERATKSQSKHQ HT >gi|148337401|gb|DS264458.1| GENE 13 14724 - 18587 5108 1287 aa, chain - ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 68 619 47 571 660 304 37.0 1e-81 MKQSATLARLSKKTVAFLAAATTLLAGLSFATAAPQQANAATRDSYADTIGNPTFEAARQ KYGLPKDMKDGATLHAFEWSFKTIMENIPDIAKAGYTSIQTEPIVKIKDNRKLGTGNWYL NWYYVYQPTDMSIGNYVVGSEDEFKEMCKLAHQYGLRIIVDSVSNHFTSDFDVIEGKWKN KAYYHEDKQISDYNNREDCTQHKLSGLWDLNTQDDTVTEGMHDLLAQTVADGADGFRYDA AKHIELSDEVFGGKQSHYWDTILQNGAQYQYGEVLEDANVRESDYANLFNSSSPRGGGIT DSSYGHEVRNAVQFKNLGASHFTSHSKVTEDKTVNWVESHDNFANGEANIPQELSDEWIK YGWAGVTAQKNGMSLFFDRPYKDGGTYGTGGVGTYGNGSGPFTENSKLGDAGSDLWKDPE VVAVNHFRNAMVGEASNVSNCGDDNCLMVERYAGSAAQDGMVVANANASDKNLAGTSTKL ANGTYTDEVTGSTITVSGGKVTSGTVKGQSIAAFSNKTRSGKVSTAEAYPNKGTIPGESK TITLRSYQSTNTTYSTSDGQSGSFKDGDTIEIGSKAKSDEVVTVTVKGTGSDGEAIKHTY SYTKYGDPTYDPSDGTSSPCDKYCMEYMEKNGLDPDCYIDAKEPCHPRNVTVTAIKVSGD TSMDLASTKSVQLKADVTTDPAGKRPSVTWTSSDTSVATVDSKGKVSGLKAGTVKITATA GTNKKSDSITITITGVKPEVSNVIYATKPSGWSKIYAYVYNDTTSKNNGNWPGVEMTQLT ADDSCAKAGTYKYEVPDLGEGKYRVIFTNGSGAQTPGASQPGIEFSGKVSWDGSSSTVTA VNCNIQQPIPVESVTISGNGVSDGKLSLKVGASAQLTATVKPDNATNKTVSWDSSDNSVA KVSDGKVTALKAGTATITATAGDISSLITVTVADVPVPVTSVSVSGDGVSDGKLSLKSGA SVQLTATVKPDNATDRKVTWTSSDSSVANVMGTGVVTAGSKAGKATVTATAGGVSASVEV TVEAQDPYAELDALAKAHASDLEDGTYAVSTALKDGMVLDVADGSRKDGANVRLWSSNGT KAQQWTVSHDSKGYVTLRNVNSGKALDVKDGKAANGSNVHQYAPNSYRSQKWVAVRSGSV YKLVSALSPSMALDVKDGKAANGSNVQIYTANGYRSQQWTFKTVAQPLKSATVWYRPSSA QSRVRVQWRVYGSPDTTGGMEMTQACGGWWKATVPSAGSTRVGLSFSYGSTTDDNGGKLY DVKGESAAVSGGQAVTDVTPNCAVTNK >gi|148337401|gb|DS264458.1| GENE 14 18675 - 23249 5820 1524 aa, chain - ## HITS:1 COG:BS_amyE KEGG:ns NR:ns ## COG: BS_amyE COG0366 # Protein_GI_number: 16077373 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 85 625 31 552 660 318 38.0 6e-86 MRLSTHTFAGMANALTRKEPPHDDQPELMTRAERRRAARKARAAKTWKKVAAGTVAVATL FGGMGVASTALAADRDSYQDTIGNSSFEAARNQYGLTKHMKNGAILHAWMWSFKTITQHM PEIAAAGYTSVQTEPMSKIKEVAANGKKFTENWYYVYQPANTSIGNFVVGTEADLKEMTA TAHKYGVRVIVDVVANHFTSDWNAIDPDWQNKEYFHKRTGCDGPNGEINDYSNRYKVTQC HLLGLWDLNTQNQAVADRMQKFLKTAVADGVDGFRYDAAKHVELPTEVFDNKQSNYWNTI LKNGSQFQYGEVLQGDSGLDYKAYANMFRDNSSDGGGNTASNYGKTIRAAVGSNNLDVKM VKNIDTGGASEDQLVTWVESHDNYANGDKESTGLTDYQIMMGWAVVGSRRAGAPLYFNRP KGSGGTNPQFAEQSQLGDAGDDMWKNKSVAAVNHFRNAMDGKGENLQNCGDKSCLMIERS TSDGIQNDGVVIANMGGDKSLSGMETTLDDGTYPDEVNGGQLVVSNHKIVSGTAKGGAVS VFYVKGESDPNVSVEAASKEFSSDNVKVTLRAQDADNLKYTTTEGESGSFTDGKVISVGK TLSIGETATVKVTGTAAKDGKKVKKGQALSASVTVKKVEVPKQNLAAQYSTNKVGMGVKK TINFNAGKDASIADWDSSMLIAQGAANDDPRVYRPNSMYEVPIDLYALYGAYDDDNLYLM WEMTNVQDVVDTGDDYPLSQGHLWQTQNLPFHIAIDTKDDSTRIGNNGGLQTGGSLWASN ITWGGEQKLNNVVTISTNGSNGPWIYKGDETGLNSKAAYGPAANAATNTKKSNIKFGYGN GILSKDVIGIDGGWGENNGRFIGDMKAENQNKAKWVNFNEKGHNSAQMDDHYEIAIPLEE IGTTADRIASSGIGIELAATFGLSAMDSLPYDLAMNDNADLPDTGSQVNNSFEKSDDDMF SVKMANIGGEEPPVETKSVKIDQSDYSVDLSEGVATKQLTATTDPKGASVSWSSSDKDVA TVSPKGVVTPRKAGKATITAKSGTKTSSITVTVTGELPPDPVAKNTVYASKPSGWGKIYA YVYTGDGATAANNAAWPGVEMTAPSATDGCQQTDLYKYEVPDSLAKGAKVIFNDGGSQQY PGSRQPGLDYNGGIVKWDGSSAALAAVECETTIPVTSVSVSGDGVSGGKLSLKSGASVQL TATVKPDNATDRKVTWTSSDSSVANVMGTGVVTAGSKAGKATVTATAGGVSASVEVTVEA QDPYAELDALAKAHASDLEDGTYAVSTALKDGMVLDVADGSRKDGANVRLWSSNGTKAQQ WTVSHDSKGYVTLRNVNSGKALDVKDGKAANGSNVHQYAPNSYRSQKWVAVRSGSVYKLV SALSPSMALDVKDGKAANGSNVQIYTANGYRSQQWTFKTVAQPLKSATVWYRPSSAQSRV RVQWRVYGSPDTTGGMEMTQACGGWWKATVPSAGSTRVGLSFSYGSTTDDNGGKLYDVKG ESAAVSGGQAVTDVTPNCAVTTKQ >gi|148337401|gb|DS264458.1| GENE 15 23361 - 23567 134 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAVKTQLFSALLQTLSATDTLIPAPRSTHYRCKFTYANVSENFPTNTTLRRKAPSPHPTP PTAHPQQS >gi|148337401|gb|DS264458.1| GENE 16 23467 - 23703 164 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQTFQKIFQPIPPCDAKHPRPIPRHRQPTPNNPEINLSRDAQKGLLYLLWHATCQSNQNI NNKKWVNITNTLGLKKIE >gi|148337401|gb|DS264458.1| GENE 17 23746 - 24333 613 195 aa, chain - ## HITS:1 COG:Cgl0344 KEGG:ns NR:ns ## COG: Cgl0344 COG0394 # Protein_GI_number: 19551594 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Corynebacterium glutamicum # 3 180 7 196 201 90 30.0 1e-18 MHIMFVCTGNICRSPMGELLMTHYLNGTTVQVSSAGTRGLPMHPIDPSSGRLMQSVGIES SGFRSRRLTRQMADEADLILCFEKQQRKEIVTLAPAAVRYTFLLDDFANMCDYCARNNMI AGLTIQERLQSVIKKSSMIRPMIPQPKDIADPHGREFSMFCVAAEQTNGAIRKILKSMRK HRTVTPAPIRSQIVA >gi|148337401|gb|DS264458.1| GENE 18 24302 - 24514 65 70 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLPVQTNMMCMPKPLNRSSNVSCCGFAKSTMASATRQTEILARGVPSMRQIVQYAQNHCR NSARAVAVSE >gi|148337401|gb|DS264458.1| GENE 19 24472 - 25707 1078 411 aa, chain - ## HITS:1 COG:SA1431 KEGG:ns NR:ns ## COG: SA1431 COG3177 # Protein_GI_number: 15927183 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 24 402 19 397 406 169 32.0 1e-41 MEYKSIRQTLAMSSSTAKPKDAAEEEYQKRLNGYSTYRSGIEFEGHEMFAVAFRELLNVM DSVRGMEVQVESLWAALPPIARRAYLMELIGAEMQSTNSIEAVHTTRKEISDALDAAVAD GPHKRLSELAKLFLGLSGENSATLELPKTLHDIRNIYDQVMAGELREEDKPDGMVFRAKQ VSVCDGFDREIHQGAWPESEIQVQLTKWLALLSDEAIPPLLRAVMCHYAFECIHPFYDGN GRTGRFLLALQLSKHLSIPTAISLSPVIADAKGRYYKAFDDAQHPLNCSDVSLFSYRMIR FIATAQKNIISVLGEKKTLLDTARKRLEHYARTQGITELQRNMLYFLLQEELFDDAPKPI SRRLMREWLGVGERKTNTALAELVNRNLLEFHGSRPIRYSLTATARAEFLQ >gi|148337401|gb|DS264458.1| GENE 20 25912 - 27087 1150 391 aa, chain - ## HITS:1 COG:no KEGG:BAD_1391 NR:ns ## KEGG: BAD_1391 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 391 1 397 397 596 78.0 1e-169 MRQTCESERENGGNNDAERERTSESEIEDLGAQLDKACASRPLDRAQHGMTRRTAATHLL TAVLWLATAVILLAMLLRMLPNNLDGKRYVPLIVALMPWLGMLSLIIAITAIAVRAIGGR VLLATVSVVCVVVQIGWHWGYIRPQQTISDAASTAVTQVSSNGLPNTSDRYARIMTFNTK EGHADANRIVEIVKNEHVEVLALQEVSWDLLNRLNGAGIANYLPYSVAAQQTWHDNGGVN VLYSAAPMENAKQNLIPVESSSVSAATIDFGGSKVRFGSVHPFSPRPRNQGLWNRSLDSL AQLQHYDNLYVLMGDFNSTWDHASFRYLLGSRFLDSGQQAGEGLHMTYPAMMPIAEIDHI VHDKGVNVGDLETKYIAGSDHRALLATLEVA >gi|148337401|gb|DS264458.1| GENE 21 27312 - 28889 1890 525 aa, chain - ## HITS:1 COG:lin1658 KEGG:ns NR:ns ## COG: lin1658 COG0477 # Protein_GI_number: 16800726 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 48 499 22 469 489 253 35.0 7e-67 MKPEKKINAKQGRTHGLSQPLTGEESYKNDHLTHVAFVSIAILTFITFVGNFTQLQLSAA LPTIVSDFGISVTTGQWLTSIFQLVMGVMVPLTAYLTRRFSTRQIVIASMAVFTLGSVFA WLGSSFVLVLIGRLLEAVGTGVMWPVLQITVFSIYPLSRRGMAMGTVGMAMSVAPAIGPT LGGVQTDLNGWRSIFLTLTVIGVISLFLAIFGLRNFGTRDASAKADFFSVGLSIFGFGGL MFGFTNIESYPFTHPMVWLAMLIGLVGIVWFVLRQIHGARSQAADPSKQPPLLNLSVLKN KSFTVGTVTAALSFFAFSSIMVIMPLYIQDCRGYSATISGLVMLPGAFGQCIAQFFGGKA LDRFGARPVALIGSITLLFGTIMMSLISMTSWIWWVSIWQFVRQIGMGFVLMPITTWSLN CLEPEEVSAGSAVTNTVRQIAGAIGAPVLVILMETFTSLRWAAIGGAKKMYAAANVFGIQ WALRVSAAICFVMVLMVFFGVRGNGAGSTRDTVQRALNRVHPHAA >gi|148337401|gb|DS264458.1| GENE 22 29201 - 30505 1506 434 aa, chain + ## HITS:1 COG:SMc00038_3 KEGG:ns NR:ns ## COG: SMc00038_3 COG2199 # Protein_GI_number: 15964712 # Func_class: T Signal transduction mechanisms # Function: FOG: GGDEF domain # Organism: Sinorhizobium meliloti # 257 418 4 168 183 93 36.0 9e-19 MELWGVLICIVCAGGVYVGAIRRTRRTYTKVSMQLLCALMLLADVSAWYHNGGCDKLDFY MTRIGNLGEYLINFIFIALFANYIWQTVSGDDMLENVSPHEWRARMSGGAKRNRKNQRSA NAQSKPKKPRSKKFDVIYAASALGIVLTIATQFNHMVYYIDSQNYYRRGPLFAIPQILGL VELALIAMLIIENRKNLSRPLFVTSLSFFVLPIVATIVQILHYGLALQAIAITISIQFTF VVDTIEMNKKIRSQDDAYQKVSYEAQHDGLTDLWSKSAGREQIENYFAHMQEGDQAVLIF VDIDDFKQINDTYGHKVGDFWIREVAQTLKRLYRHDDIIVRFGGDEYVALIKNTANERVI ESTLDLFHRQLAQASAQYGQDVHCSIGACRVLSGKNVDLNLCLGFADHALYQSKREGKGM YTVVDYDSGKVQAA >gi|148337401|gb|DS264458.1| GENE 23 30620 - 31903 1472 427 aa, chain - ## HITS:1 COG:Rv0924c KEGG:ns NR:ns ## COG: Rv0924c COG1914 # Protein_GI_number: 15608064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis H37Rv # 32 425 35 428 428 360 50.0 2e-99 MKNDMDSKNMTITAQHDRSARPYHHGHALAGILGPAFVAAVAYVDPGNVAANITSGARYG YLLVWVLVLANCMSVLIQYQSAKLGIVTGKSLPEILGERLGDAGRFMFFMQAEVIAIATD LAEVIGGAISLKLLFGLPLFVGGCIIGAVSTVLLIFEKGATHRIFEKLIIGLLLVITFGF IAGLFIAPPNPKEVVAGLIPRFKGTDTVLMATSMLGATVMPHAIYLHSTLVNDHYAPGEA KPSVKKLLHGSKIDVAWALILAGSVNLALLILAANSLYGMTGTDTIEGAQRAIQHVLGPV IGTIFSIGLLASSLSSTSVGTYAGSEIMHGLLRIKAPMWACRVVTLVPALVVLWFANNPT EALIVGQVVLSVGIPFAIIPLMRYTHDRTLMGEYVDGPVKHVVNIAVAALIVALNVVLIV LTMLGKA >gi|148337401|gb|DS264458.1| GENE 24 32069 - 32923 953 284 aa, chain + ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 3 282 19 293 294 251 45.0 8e-67 MTVFHTPMITLPDGNLIPQIGLGVLRIDDEGVTPVVESALEAGYRHIDGAAGYNNEAGVG RALQNAGFTQGENRKNLWVTTKLRDSEQGYDSARKAFDRQLDLLQLDYVDMYMLHWPTPF NWRSGETWKAFDEFRAEGRVRTLGVCNFLPEHLERLHKETGEYPAVDQIELHPTWQQREV VAYCKEHGIAVEAYSPMARGADLNAGDGVIERIARAHGVTEAQVILRWHIENGTIIIPKS VHADRQRQNLDLFGFVLDPDEHAAIDALDGPTRAGHDPMTFTYA >gi|148337401|gb|DS264458.1| GENE 25 32916 - 33689 673 257 aa, chain + ## HITS:1 COG:no KEGG:BAD_1397 NR:ns ## KEGG: BAD_1397 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 4 257 10 250 250 389 77.0 1e-107 MRDSRFRRQRFNANGLAERIAILLVVAVVAGISIGLLMPKVNPTVGEMTGEYVATGSAAE TLQSLTIDDQPSRAGYDRDSFGFRQTDDDGNGCDVREDVLARDLTDVRYIAGSGSSSDSG SGSGAGCKVKSGVLSDPYTGTTIRFTRGVKTSSAVQIDHVVALENAWQSGANQWDHTKRY RFGNDMYNLLAVDGPANQEKGSASAAYWLPTNGAYRCDYVARQIGVKAKYGLTVTTKEKR AMLSVLRACPAQAVPER >gi|148337401|gb|DS264458.1| GENE 26 34117 - 35259 474 380 aa, chain - ## HITS:1 COG:no KEGG:BAD_1398 NR:ns ## KEGG: BAD_1398 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 380 1 380 380 738 98.0 0 MNADDAYKPIQRATLSEASWRILRIAQSVELRHPVSHETALAIWGVELPADSDCSVVSLR SSQGGYAGTDVDYGWSGESPAFGHSEHSIRLGQDFPDSDFQYFPASQAVSRNQIPGLRQS ASQPSQFPQSPAKLHTVAQSPARRGRVKKSTSVSADVTVHVWKGLSARHVREVAGVPVLM PVPAWSLAAGRWGIQDIVMVAESLIRHRFATRKGLIEFVKTENVPYRSKCLDALALVQSG SDSPKETEMRLTLVRYGLPIMQPNCVVPGVNFANGAAVTLDLVDAEHRFGLDYQGDHHRT DRAQYRRDQNKLSRLAAAGWTVFSVTQLDLSDELHRAAFAMNVAHALSSIVGRPIGVTTP LPWRKVVLRYQKARKLRLLD >gi|148337401|gb|DS264458.1| GENE 27 35997 - 37070 1298 357 aa, chain - ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 13 347 2 331 337 132 29.0 9e-31 MAEVKPDKSDRKRVTLREVAQEAGVSLKTASNVINHSGRMADATREKVQDVIDRLGYRVN VSARNLNRGKTGFITLAVPSLTAPYLAELANRVIDAARIYGYSVYITTYAEGSAQGARAL LRNFNATVSDGMILSISEVEDLDPEDLDVDYPLVCVGARSTHGKADHVTPDDVQEARLAA QYLFDHGATNLAVIGSRTDPEHILELRDAVEGNAQLRMRGIFEACADQGVELDTRLVPNV GQDWTIGSGARMTQRIVDSGIPFDGIVAFNDQLALGALFTLAANGIAVPDRVQVIGFDNN EEAAYFQPPLTTMDSCLDWIAPTAVSRIINRIDGSRTLEPELITTQSRIIARATTRA >gi|148337401|gb|DS264458.1| GENE 28 37115 - 39250 2679 711 aa, chain - ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 31 711 9 672 672 390 35.0 1e-108 MALCQLPKEIIVSARRNFEWPELLTADGRGIAFGGDYNPDQWSEDIWDDDIRLMKQAGVN TVALAIFSWDRIQPTEDRWDFGWLDRIIDKLGNAGIVVDLASATATAPLWLYESHPEVLP RDKYGHPVNAGSRQSWSPTSPVFKEYALTLCRKLAERYGTNPYVTAWHMGNEYGWNNRED YSDNALEAFRAWCRRKYGTIDALNQAWGTTFWGQEMNGFDEVLIPRFMGADSMVNPGQKL DFERFGNDMLLDFYKAERDAIAEICPDKPFTTNFMVSTDQCCMDYAAWAKEVNFVSNDHY FHEGESHLDELACSDALMDSLALGKPWYVMEHSTSAVQWKPLNTRKRKGEIVRDSLAHVA MGADAINFFQWRASAFGAEAFHSAMVPHAGEDTKLFRQVCELGASLHTLADAGVQGTELA HSDTAILFSAESEWATRSQTLPSMKLNHWHDVRDWYRAFLDAGSRADIVPLAYDWSSYKT VVLPTVLILSAADTQRLADFAAAGGRVVVGYATGLIDEHFHTWLGGYPGAGDGLLRSMLG VRGEEFNILGAEAEGEPGEIRLSSADDSAALDGTTTRLWQNDVNVTGEHAQVLATYAGEE ADEWELDGTAAVTRNPYGSGEAYFVGCDLDVADLTKLVRAYLAASSQENADVLHTVRASA DATFDFYLPRGKKTVELQGIEGEPVILFQTDREEKPGSYTVRRNGVLVVRR >gi|148337401|gb|DS264458.1| GENE 29 39273 - 41528 1801 751 aa, chain - ## HITS:1 COG:XF0840 KEGG:ns NR:ns ## COG: XF0840 COG1874 # Protein_GI_number: 15837442 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Xylella fastidiosa 9a5c # 46 242 37 217 612 130 39.0 9e-30 MRYEVDLSEASKFARTPAYGIPVIRAAAACGPDGGTLGATNRFLTRDGSPWIPIAGEMHY SRIAAERWDTELAKMAAAGIDVVSTYVFWNHHEEREGEWDFSGNRNVRRFVELCARHGLH VIVRLGPFCHGEVRNGGLPDWLYGKSYEVRSLDAGFLDAVRGLYAHIAQQLRGLYFKDGG PIIAAQVDNEYMASSAPWEMTTGISREWVPSGHDGAGYLERLRDIAIEEGIDPPMFTCTG WQSPVPDDMLPLWGGYAYRPWLFYDGVGAEGMTEHPATDEYRYRRLHGSSTSDGFDPPYD PDSRPYACCEMGGGMFNSYDYRFVLPKRSVDAMANIKLGSGCDFLGYYMFHGGTNPKGAA GFLNEGQTPKRSYDFQAPLGEFGQVRESYRRLRTLHEFVKAFGPELAGMPVSLQDGQDRI DPSDSETLRYAVRSDGERGFVSIDNFQDHARVPSRHGEQIDVTTGTGERIRFTGIGLAEG ENCILPFNMDLDGVRLVRANLQPVTVLRVPGRPFRTFVFLKPDGMDELTFHFEGDIQDVT VGKADFERFMVRDAAEIVCVTRALAGRMTVLDGGLAFVDDDNALLYEDGDGWTLESPRAE NGIAAYPEGLLGSPRPVEPVSVYARLRRLHADRYEIALPAGMGRLFRDQRQVADVMLNIA YQGDIGWLFCGDVLIADNFCNGETWQVGLRDYADAIDAAGGKLTLVVTPLRRGVRVKVTS SMAARLEQSDACVADVTDVYATPVYHMPVGE >gi|148337401|gb|DS264458.1| GENE 30 41570 - 42403 1254 277 aa, chain - ## HITS:1 COG:BH1119 KEGG:ns NR:ns ## COG: BH1119 COG0395 # Protein_GI_number: 15613682 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 5 276 4 281 281 142 33.0 5e-34 MTLQQRERIGSIIRSVVVIAIALICAVPLYVIVINTFKSSAEMSMDPIGLPKTWNFENYT YAFGHLPIVNAFKNTIIVTVVGVGLQVLFGALAAYGMILKKSKFTAVIGVLLMLSFIIPG QTLLIPQYRMEAQVGLVDSLLGLIVLYTGGATFCYFLIVQYMRGLPYEIIEAARIDGAGP FRIFWTIVLPLIRPILTTVIVFQTMGTWNDFMTPSVYISSTNKQTIVLQVFNAISTFTTN WPLFMTVTTIALIPVFVFFIFCQRWIVAGLVAGSVKG >gi|148337401|gb|DS264458.1| GENE 31 42400 - 43362 1184 320 aa, chain - ## HITS:1 COG:BS_yurN KEGG:ns NR:ns ## COG: BS_yurN COG1175 # Protein_GI_number: 16080312 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Bacillus subtilis # 39 308 12 282 292 150 34.0 4e-36 MSVSTASAARPHSADQVEALHLKQRRHRNFMENFASARFLLPIMVVFIVVILIPFLQSLV FSFTDYSGYNFADAKFVGFANYVQCFKDPTLLAGLGFTLLYTVATTVLITVIALPLAVVL NRKFFGRNFARSLFFFFSVPSMAVLGLVWQYIFSPLKSGVVNTLLAKIGIDAIPWLSNSE LAKFCVIFVAVWAQIGWHATLYLAYLQAIPADIYEQAAVDGANRRQQFFNITLPQMVPAM GVSIFMLLTGGLKVYDLPYGLTSGGPGYSTYTVTQSIILTGIGSSRYGLGSALGVIFFIC CALLVALQQVITNLVEKRLS >gi|148337401|gb|DS264458.1| GENE 32 43464 - 44714 2018 416 aa, chain - ## HITS:1 COG:SMc02873 KEGG:ns NR:ns ## COG: SMc02873 COG1653 # Protein_GI_number: 15963951 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 21 414 16 413 419 102 26.0 1e-21 MEKKSIRMIAAVAAAAMLVPLAACGGGNAADGKTTLSFFSNNSQDKYQPIIDAFEKANPD IKIDYSTTTGSQSGYQQTLQTRISGGNLADVYIVPPEALSDLVKGNYAKDLSNESFMDKI GDAAKKAYSVDGKVYAMGVSTWTNAWVYNKDLLKKVGYDSIPATWDEFLTMCGKLKAAGI TPYLEPKDGLGNAVEGWIGAESAKQGEALDAKIDAGKDTFKNVYGKYYGEWDKLIKQNLM SSDVSGLSGDQVKSEFTAGRLAVYPSGSWDIDSFNETGLNYGFGQIPMLKKGDTPYAPGS IDPAFGINNKISGDKLKAAEKFFTFLTSDEGLKLYQKQLGLIPSVKGFNATVDDHFKDAY DLYIKTGNVYLNSAHWSKGTTALRAETFTQLQQVALGSISPTQAAENLDSKLKTLS >gi|148337401|gb|DS264458.1| GENE 33 44763 - 44930 103 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQISLFELTWYTGKPILFQQVHSYTKKGRKYPESTEWSVEDILTCIYRSWSGFDE >gi|148337401|gb|DS264458.1| GENE 34 45292 - 45996 943 234 aa, chain - ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 29 234 4 188 193 166 42.0 3e-41 MVVAVEYISKEESADVAAGSASAKHGVTGILAVQGAFAEHAAMLDRLGAPWKLLRAAEDF DDSIDRVILPGGESTTQGKLLRSTGLFEPIAEHIAAGKPVFGTCAGMILLARKLDNDDNV YFGALDAVVRRNAYGRQLGSFAATADFGSSSGDSAVVVAPGEHVPQDAPADIVLKDFSLV FIRGPFVAEVGPAATVETSVDGNVVGLLQGKILATAFHPELTDDTRIHELFLSL >gi|148337401|gb|DS264458.1| GENE 35 46135 - 47010 1249 291 aa, chain - ## HITS:1 COG:SP1468 KEGG:ns NR:ns ## COG: SP1468 COG0214 # Protein_GI_number: 15901318 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 291 1 291 291 412 78.0 1e-115 MANNRNELNKNLAQMLKGGVIMDVTTPEQAKIAQDAGACAVMALERIPADIRAAGGVSRM SDPAMIKGIQEAVSIPVMAKVRIGHVAEARILQAIEIDYIDESEVLSPADDVYHIDKNQF DVPFVCGAKNLGEALRRVAEGASMIRTKGEPGTGDVIQAVRHMRTMNKQIRELVSLRDDE VYEAAKQLAVPYDLAKYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS GDPAKRAAAIVQATANWQDADLLARLSENLGEAMVGINEDEIQTIMAARGE >gi|148337401|gb|DS264458.1| GENE 36 47137 - 47277 181 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MIVSLAYDFDSVDISSVSSVFLALPATMAFDSSASVRRRARYRKHE >gi|148337401|gb|DS264458.1| GENE 37 47434 - 51462 3378 1342 aa, chain - ## HITS:1 COG:PM1473 KEGG:ns NR:ns ## COG: PM1473 COG1132 # Protein_GI_number: 15603338 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Pasteurella multocida # 722 1342 8 546 552 345 35.0 3e-94 MFDKRLFSLADGVGRLIAAKVACQWLGLVANIAFVVAVVRMLQPLFAPVSSATAPCIAII LIAAVVRFVTIRAAARFGSEAAERVKLALREKLFNKMLALGPSYAQRVRTAGVVQSAGEG IEQIQSFFELFLPQLCYAVLAPITLFAVLAPIDLPTAATLLACAPLIVLIVGMVAMRAAR VFKKYWGKYTDMGAAFLDNLQGLETLKTFDADERAARVMDEKAEQFRVMTMNVLQIQLRS LTAMDAVAYGGAAAGIGVAVWRFVSGSLSPSGVFALSGVLPLGLTPIAAVLLTILLAADF FIPLRQLGSYFHVAMNGMTSTKRIFALLDAPEPEHGSKELPEFGASGRGVGVEFRGVSYR YADADVDAGSAAGAGPDAAGSAGAGVASPRRISSTSHSDMRNADVDSVDEGGGAGDARET RYALRNVALRALPGEVTAIVGPSGSGKSTAVQLLAGTLVGYEGDVLLSEMPSGMQDEVLG AMLSSAAPDDSETLKSHQIRDLTAASLTREISIVSAHSHLFAGTLRDNLLMARADATDNE LWQTLEAAHIDDFVRAQSRGLDMPITQDGANLSGGQKQRIAIARVLLRRSAVYIFDEATS SVDADSETLILQTIRALADAGATVLMVTHRMANAADADHVVVFDGGVVVEQGAHDDLMAA DGTYAKLFRAQESVERVGLSGRVAPRVSRMTHASGAFAVSRMSGSAESNASGAKSDMPTT QVIARLLREVGPLRKPMAIACACGILGHLAATFLPVFGVAALFAAAGAKVWNLSLPAAIA AMIICALIRGGMRYAEQYMNHNVAFRLLALFRSKTFAALRRLAPAKLSGKGKGDLIALVT TDVELLEIFFAHTISPVVIAIATTVLYAVALLTLSPAIAVTLVIAHLTVGIVLPKLFATA VGGLGGNIRRESAQLDDEMLDDMRGLDEIIRFGQGHARLAGIASRTRSLWSRRARLSAKN GDFAGFGAVLVVLFTAIAALLAMVTSGTTMPIASAASAAAATIQTVISAPAARLTAAFVL LASSFGPTLALSALPANLTQTFAAARRLFALMDETPAVEERGDFLPRYHGMSMHDVTFGY GNSGEAPISGSDADAPESSAEPILSHVSFDIPQHGILGIQGPSGRGKSTLLKLLMRYWDP QSGLVALSEVPLPQIDAHHRRRVQTMMGQETYLFDGTIRENLLMACDRGDADRAGNAGDP DDSATSGRALLTPPAPPVSWNAADSALSTRSTPSVGDDVLRAALAKASALELVDSLPQGL DTPVGELGGRLSEGERQRIGLARVFLRNASLVLFDEPTSRLDAYNESVILQSIDALAQQG SAVLLVSHRDSTMRIADRIVRM >gi|148337401|gb|DS264458.1| GENE 38 52106 - 53929 2361 607 aa, chain + ## HITS:1 COG:Rv2187 KEGG:ns NR:ns ## COG: Rv2187 COG1022 # Protein_GI_number: 15609324 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium tuberculosis H37Rv # 2 599 1 594 600 447 42.0 1e-125 MLTEYTTPGASVEVRDDESIYSLLTERIKRTGEDTVIAERKTAPGQWTKVTTGEFHKNVL SAAKGLIAFGIGKGDAVTLFSTTRYEWGVLDFALAAIGAVNVPIYDTDSAAQAERILNDS NVKLAIADDRERFDRLDSVIGRCPSLKHILMLDANAMGALEGLGVTVSDEELDERITSVR ADDLATIVYTSGSTGAPKGAELSHRNFVSITRAGSLALHEMILEDHPRLLLFLPLAHCFA RFIQYASIASDDGVVGYLPDTKTLLPDVRSFEPTYLLGVPRVFEKVYNAASRKAGMGWKG RLFLKAAESARDWSRMQQAGEKPTMKQTAEHLSYEASVYHTVRGALGPRIRYVACGGAPL DASLAHFFNGIGLPMIQGYGMTETAAPFAATRVTDNVIGTVGQPAPGSSVRISDDGELQV KGPNVFMGYHNLPEKTAEVFTKDGWLRTGDLASIDDEGRITITGRKKDIIITAGGKNVSP IPMEQEIAKCPIVEHAVVVGDNRPFIGALVTLDPEGLAAWLPSVGLSADTPLDRVAATAA VHDEIQKYVDKANATVSRAESVRKFVVLDAQFTQENKCLTPSLKVVRPAVNRVFADVIDQ QLYAGKR >gi|148337401|gb|DS264458.1| GENE 39 54121 - 55635 2370 504 aa, chain - ## HITS:1 COG:YPO2253 KEGG:ns NR:ns ## COG: YPO2253 COG2160 # Protein_GI_number: 16122477 # Func_class: G Carbohydrate transport and metabolism # Function: L-arabinose isomerase # Organism: Yersinia pestis # 7 501 4 499 500 472 46.0 1e-133 MAMENPFEGKEIWFGVGSQDLYGEEALRQVAQQTGEMVDFLNATGKIPAKIVLKPTLKSS DGVKAFMTEASANPNVIGVITWCHTFSPAKMWIRGLEVLTKPLLQLATQHHKEIPWETID MDFMNLNQAAHGDREFGYIVSRLGIPRKIVVGHYTDPEVAEKVGTWARACAGWDASQNMK VMRWGDNMRNVAVTEGDKTEAERVFGASINTWAVNDLVAAYEKVKDSQVKDLIEDYKAKY DVAPELLDSRYDELFIAAKEEAAMVNMMRENGCTAGVDNFEDLGTLPQLPGVGPQRFPSE YGWGFSAEGDWKTSVLVRIGAVMGYGLEGGASLMEDYSYNFVPGNEFDMGSHMLEVSPSI GTIAKPKLAIYPLGIGGKSDPVRLVFSGKPADAVVVSMADERERFRLLMDEVTIVEPQGS LKNLPCARAVWKPKPDLKTAVQCWITAGGSHHTCMTTSVGREAWEDFARIAGVELAVIDE NTNARQFEKELELSEMYHRLNNRH >gi|148337401|gb|DS264458.1| GENE 40 55689 - 56381 880 230 aa, chain - ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 19 229 48 253 254 160 41.0 2e-39 MATLADYGPEVRAEVKQVREVVATLHEQLIKWNLVVWTAGNVSQRLHTADLMVIKPSGLR YEYLTPSSMVVCDLDGNVVDGAEAPSSDTASHAYIYRHMPDVYGVVHTHSTYATAWAATG QNIPCGLTMMGDEFGGPVPVGPFRLIGSEAIGEGVVETLKKYPKSPAVLMQNHGPFTIGK DAEAAVKAAAMTEEVAHTMWAAKQLGDIIPISQEDIDSLNDRYTNVYGQH >gi|148337401|gb|DS264458.1| GENE 41 56425 - 58047 2090 540 aa, chain - ## HITS:1 COG:CAC1344 KEGG:ns NR:ns ## COG: CAC1344 COG1070 # Protein_GI_number: 15894623 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Clostridium acetobutylicum # 11 535 9 533 534 619 56.0 1e-177 MTQEQVAVTAEKIRAGKTSLGIEFGSTRIKAVLIDDAYHTIAAGDYEWASHLEDGLWSYT QEEIWKGLQTAYARMAGDVETAYGERLTHVGHIGFSAMMHGYLAFDKSGELLVPFRTWQN TNTHEAHEKLSELFQYNIPERWSVAHLYQAVLNHEEHVSKVDYITTLAGYVHWKLTGEKV LGVGDASGMFPIDPATHTYETEFIKRFDAIEEVAAQPWKLENLLPRPLVAGTPAGTLTAE GAKLLDPTGTLQPGVILAPPEGDAGTGMVATNSVRVRTGNVSAGTSIFAMVVLEHKLARL HPEVDLVTTPAGDLAGMSHANNFTSDLNAWVGLFGQFAAAIGQPVDAGTLYGTLFRAAIA DDVDADCGGLLNYPFRSGEFLAGLPEGRPLFARSPEARMSLGNFMRTQLFSAFSPVKIGM DVMTKDEGVAVDSLVGHGGIFTTPKVAQKILAAAFDTPIKVMATAAEGGAWGMAVLADYL WHADQPLADYLDTRVFADAASTTEAPDANDVAGFEAFFDRFRKGLPIEHAAIESIPLETK >gi|148337401|gb|DS264458.1| GENE 42 58212 - 59330 1056 372 aa, chain - ## HITS:1 COG:CC1753 KEGG:ns NR:ns ## COG: CC1753 COG1609 # Protein_GI_number: 16125997 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Caulobacter vibrioides # 10 331 4 312 348 112 29.0 8e-25 MAGKRNAGNKRPSMFEVAKLAGVSHQTVSRVINHSPDVSDATREKVQKAIDQLGYRPSNS ARALASHRSRTIGLIAGGQHFYGPISTISAIETMARQHGLFVTVSMVHEALCSQEEFDDL CRTFDEMNVDAFIFLTPTDVMFSAACRTRIAQPRVIVTSTHGGIGVQDGLRLMKSADRRR VSVVGMDQWSAMADVMHLVVEYGHRSVLYFAGPKEWRDAATRLLAWNKLCAANAVNSVTV QCETWESSEAYGKMNHILDNIGRTGGNLPTCMVCANDSQAVGVARALHEHGVRVPQDVSL VGFDDMPAMDNMFPPLTTVRPGFEQLGVAAMRETLYLLGAGEENSFGSSQHGVGLVSAQM VNRSSLGPVRRR >gi|148337401|gb|DS264458.1| GENE 43 59441 - 60868 1561 475 aa, chain - ## HITS:1 COG:Cgl0685 KEGG:ns NR:ns ## COG: Cgl0685 COG0424 # Protein_GI_number: 19551935 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Corynebacterium glutamicum # 149 286 62 197 197 133 50.0 8e-31 MSIPLILASQSRPRRDVLFSAGICPTIRVSHVDEPAALEREAAALGVTVNDLSVEQRVMI LATAKAEAVHQAYRNIADTAAHARGERVVGFPLRAADDRDASSAGTAARTDSAQSADETK TRDFSGIAIPTVAEPIADFVDGRPSLTRSKAGPLILGCDSMFLLDGECYGKPHSEEVARE RLRAMRGATGELWTGHCLIDFASGRMVRGASKATLHFCEYSDLDIERYIATGEPLEVAGS FTLEGFGGAFIDSIEGDPHGIIGLSLPLARRLAAQLGVEWTDLWNVTRSDLAPDAEYDAK TGAAKPLPPKENVHQPGDGWVDCACGRKHWGTNGASGVLLARRSETTGEVTHVVMQHRAV WSAEGGTWGIPGGATADGESPIEGALRESYEEANITPEDIDVVGSYCEDHGPWSYTTVFA FEKPGHRVEPKANDDESMEIEWVPVDDVPNRKLLTAMRTDWPNFAARLRALAAVR >gi|148337401|gb|DS264458.1| GENE 44 60865 - 61869 1294 334 aa, chain - ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 4 295 7 273 309 171 40.0 2e-42 MTPVTRKVRVKVPATSANLGSGFDTVGLALDYHDELEFTLSADPVNTAAQVMIEGEGEDT LPRDETHLVVSTFRRACQTFGLGRVGFILQAHNNIPQARGMGSSAEAIVAGIAAAAAFAQ DDDLNRDAVFELAAAIEGHPDNVAPAVYGGLTMSWDMETAEGVGSVPIPGGEPMHNGFHT INYRVADDLTAAVFVPDYELSTEKARQALPTEIPFKDAVHNVSRVSLLPAAMNPAMLASG SRQNANALLFAATQDRLHQPYRASLMEPSWALIEKMRSHGFASTVSGAGPCVLVLHHGDA HEELERIAAEELASGHWRVLHLAVDTKGVQVERA >gi|148337401|gb|DS264458.1| GENE 45 62041 - 63357 1853 438 aa, chain - ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 7 419 17 425 445 318 47.0 1e-86 MAQEDVAPIRVGLLGAGTVGSQTARLLVEQKDELAARIGRPIELTGVACLDPAETNPFPW IDKAIVTTDTMSVATNSDIVIELIGGTGVARKFVLAAIESGASVVTANKALLAKYGPEIY AAAEAKGVDIYFEASVGGAIPFLKPLRESLVGDKVTSMLGIVNGTTNYILDEMTTKGLDF DDVLKDAQAKGYAEADPTGDIEGYDAANKAAIMATLGFHTSVTIDDVSVEGITKITADDI AAATAENKVIKLLAVVENTDAGVSARVYPALISNTHPLASVHGSFNAVFVKAEAADDLMF YGRGAGGAPTASAVVGDVVTEARHIAQGCTGPSIPLYKDLQKAPIEASKAEFAVRFVIHD NPGVLAAIAAKFADHGVSINGVNQDLKPTLKDPGYDGELQQLRLVTHMTDELTLRETVKD VCELDCVCGEPSILRVLN >gi|148337401|gb|DS264458.1| GENE 46 63516 - 65090 2063 524 aa, chain - ## HITS:1 COG:MT1332 KEGG:ns NR:ns ## COG: MT1332 COG0019 # Protein_GI_number: 15840743 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Mycobacterium tuberculosis CDC1551 # 6 522 11 446 447 270 35.0 7e-72 MPVSPIWPAGSAVNDEGEITFHGRTAASLLDEFGSPLYVIDTDDVRARATKFVHAASHAF NNTVTHVSFAGKALLSKEICRIVTESGMLIDTCSMGEMRIALAAGVPGRRLVLHGNNKSD AEIELAIEQGFNKIVIDEPDEPARIAAMAKRLGKRARVMLRVTSGIHAGGHEFVSTAHED QKFGVALLPAGADAGKLGVLDDLTDVTPAGSNARLGEHASEVHAQRELQYDIKYPYDLSH EKVSEGDRRLAEAMTMVADGPALAVLKDIYRRQDVLELVGVHSHIGSNIHDADAFIQAAK RMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDIDVELGRLADAVSTVNRALGMP APVISFEPGRWTVAPTGVTLYRVGTVKPVELSGEAKDKSGNPVTERVYVSVDGGMSDNIR PALYGSDYTARLANRKGSEQTKLCRVVGMHCESGDIVVNEVRLPADIKRGDILAVPVTGA YGRTMASNYNQALIPAVVGVGEAGAHVMIRRQTIDDLLSWDVSE >gi|148337401|gb|DS264458.1| GENE 47 65124 - 66962 2463 612 aa, chain - ## HITS:1 COG:MT1331 KEGG:ns NR:ns ## COG: MT1331 COG0018 # Protein_GI_number: 15840742 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 17 612 1 550 550 546 51.0 1e-155 MDRKTDSVSVPGILGRMSPEALSELIFNIANTLVSEGKAGTLTADLIPPQAKFAVMRPKD RAHGDWASNAAMQLAKKAGMKPRDFAELFAAELTNADGIKSVEVAGPGFINITLDSASAA AVVDAVLEAGSDYGKNDHLSGKTLNLEFVSANPTGPIHIGGTRWAAVGDSMARVLEANGA KVVREYYFNDHGEQINRFAKSLVAAAHGEETPIDGYKGAYIDEIAKRVIDEANADGVDVL SLPRVDGGADQDGNPLGEGDSEQREEFRKRAVPMMFDEIQRSMKNFRVNFDVWFHENSLY SDGEVDQAIADLRARGDIYEKDGATWFESTKHGDDKDRVIIKSDGNYAYFAADIAYYRNK RHRETNPADVAIYMLGADHHGYIGRMMAMCEAFGDKPGENMQILIGQLVNVMKDGKAVRM SKRAGNVVTIDDLTDAIGVDASRYSLARTDYNSPVDIDLNLLSSHSNENPVYYVQYAHAR SCNVDRNAAAAGITYEGADVSLLDTTADGEVLAALAQWPALLREAGDLRAPHRVAHYLED LAATYHKWYNVERVVPMELTDPEARGEQADAIRIAKAPEPARAAARLKLNDAVKTVIAEG LDLLGVTAPDKM >gi|148337401|gb|DS264458.1| GENE 48 66946 - 68430 1819 494 aa, chain - ## HITS:1 COG:BS_ybgF KEGG:ns NR:ns ## COG: BS_ybgF COG0833 # Protein_GI_number: 16077309 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Bacillus subtilis # 15 456 12 454 470 503 58.0 1e-142 MAQSQEKPDVEQGGLERKMETRHLTMISLGGVIGTGLFLSSGYTIHQAGPLGAIIAYAIG SLLVYFIMLSLGELSVAMPYAGSFHLYAKRFIGPGTAFTIAVLYWLNWAVALASEFTAAG LLMQRWFPHSPAWVWSAAFIVVVFLLNILSVRLYGESEFWFASIKVFAIIAFIIIGLLAM FGAIPIAGYDHAPMFENFYSDGWLPNGVLPIFSTLLTVVFAFSGTEVVGVAAGETKDPSK AIPKAVHTTVLRLAIFFIGSIAVMAALIPWHKSGVDASPFVLVFQSIGMPFAGDIMNFVV LTAVLSAANSGLYVCSRMVWSLAQEGMIPRKLAKTNFHGVPVFAVMFSMAGSLLALLSSV VAASTVYLALVAVSGLATLVVWMSVSVCHLRFRHQWLAQGHTVGELKYRAPGYPFVPIAA IVMCVGALVLVICDPSQRSTLLTMIPFVALCYTGYYASVAWRAKRHGGQDDAQNVLQSVP QDVSQPHREDGQED >gi|148337401|gb|DS264458.1| GENE 49 68692 - 69081 651 129 aa, chain - ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 6 127 14 134 137 110 45.0 6e-25 MSEKLEAVATSEAPAALGAYSQAVKANGFVFVSGQLGIDPATGELAGESAGEQAAQALKN IKHILDTAGSGIENVVRATIYMKNVEDFHEVDDVYAKVFIGSVKPARVAFGGNDIPKGAL VEIDAIAAL >gi|148337401|gb|DS264458.1| GENE 50 69578 - 70546 1371 322 aa, chain - ## HITS:1 COG:ML1159 KEGG:ns NR:ns ## COG: ML1159 COG3118 # Protein_GI_number: 15827586 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Mycobacterium leprae # 13 322 1 301 301 88 27.0 1e-17 MAEQQAFHPGVSLAGAVDLEALKHQVKAEPGQAGGAPAAGGYVIDTTENTFQAMVQTSAT FPILLFLWVPTDDRLFAMARALGDAVNKLNGQIQLSRIDIASNPSIAQAFQIQGAPALFA LIGGRPMPILQGLPSDEELQQITDVVVPKLIAAAQQAGVTGTAPYSGDPDSDAANSASAG SVQDQVPPEHQEAYMLAQQGDYAGAAAAYEKVLEADPNDTRAARERAKALLLARSANADV RVVRAAAADKPDDVDAQLAVADIDMIGGQIQDAFDRLLDFVAAGHKADIEPVRQRLLEYF TIPEPTDERLKRARRRLATLMY >gi|148337401|gb|DS264458.1| GENE 51 70679 - 71677 1185 332 aa, chain - ## HITS:1 COG:no KEGG:BAD_1422 NR:ns ## KEGG: BAD_1422 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 332 1 332 332 587 100.0 1e-166 MRKRSQAIIAAMLALGMAVGMCGCEGQLPTPKATTRQDAPNLSAKQEQKVRTRILKTLDQ CNQNRDTDTLPTILEGPELDIRTSELNVAKATGNLDRKTTIPTDLAQAVISTDAGWPRSV FSITSTTKDQQSKRLLVFRQDSARQNYKLWGVARLFSGVKMPSFEISKTGSAQGTPTDTG LVMTPKAAVDAYADLLQNGANSKYASKFADDDLRSKLADLTAQVQKAMELNEGTQQQTFE PVNGAISVMRSADGGDLVVAQINSEWTRSAGAGRESQPASDAEKALFGNGKATSTMKTSY VNVIALYVPPANSGQKITAVGSERQPVKVEAL >gi|148337401|gb|DS264458.1| GENE 52 71677 - 72807 945 376 aa, chain - ## HITS:1 COG:no KEGG:BAD_1423 NR:ns ## KEGG: BAD_1423 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 24 376 1 353 353 622 100.0 1e-177 MTVLQEEQEKPQIETGPTRHAKIMRGIVTPIFGLLAIACVVFGVLNSTVWKPDNEITAAA PVNGSEYVVTDPNVLQLVDSRVNISAKSRDKKSNVCIAIGSARDVAGWIAGSKYMRVSGL SDWTTLSTMKVSAQGTADNSQNQVAFKDSDMWRTIKCNDGAVDMQVKGSNSNNAEDVVAL IDFGNRKGDTVTLNWDRRNLPNFAMPLYLAGGLLAILAVLSASVFAMPPHKRRNKRAFAM VEGVGVNEGDENEVSAWVKNAETAASNRARSRSRHGRRRHAEHRTGGRTSSFEETQQPVI VDPVARNLVADQQNTIAESQPTVSESTVFESTAGESSVDDEATSVISQDELAAYFARLAQ EEVQTETQEDGQEEDQ >gi|148337401|gb|DS264458.1| GENE 53 72888 - 73844 1250 318 aa, chain + ## HITS:1 COG:VC0354 KEGG:ns NR:ns ## COG: VC0354 COG0545 # Protein_GI_number: 15640381 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Vibrio cholerae # 212 315 146 249 259 101 48.0 2e-21 MRKSLLSKAVTAVCATVMCLGVTACGGNSSAKSDKSNSDSSSSSEKIGMHQIAGVTAKGE LGKKPTVSFKTPMTVEDNSYVVLQKGDGAQIEDGDRVCSQGIAISVKDGSELASTWEKNT PDCSTVVTSDTSQMTENYYKIFKSLKLNSTVAFGVNDSNSSGTSYLMVLTLVSKSKDLKK ATGEKVADIPADLPKVTLAKDGKPSIDMNGYKGSDSLISQDLIKGKGAVVKDTQSVVAHY TGWLLDGTQFDSSWDRGQSSAFSLDSVIKGWKQGLAGHTVGSQVLLVVPPSLGYGNKDQE KIPANSTLVFVVDILAAY >gi|148337401|gb|DS264458.1| GENE 54 73893 - 74597 1057 234 aa, chain - ## HITS:1 COG:Cgl1188 KEGG:ns NR:ns ## COG: Cgl1188 COG1637 # Protein_GI_number: 19552438 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Corynebacterium glutamicum # 1 234 1 230 230 265 55.0 7e-71 MRIIVADCSAEYSGRLNASLPLAKRVLLIKADNSLLIFSELGSYKPLNWMSAPCSIRDIT PDHADDDVDTEVPQKVIRASADKSNDVLEVTLQHIYSDESYDLGEDPGLIKDGVEDHLQK YLAEQIERIGKGAKLVRREYPTAIGPVDIMAIDGNGEHVAIEIKRNGGIDGVEQLTRYCD LLNRDPLLAPVHGIFAAQTITPQARVLAQDRGFKCLILDYEEMKGTEDDSLRLF >gi|148337401|gb|DS264458.1| GENE 55 74747 - 75025 287 92 aa, chain - ## HITS:1 COG:no KEGG:BAD_1426 NR:ns ## KEGG: BAD_1426 # Name: atpC # Def: F0F1 ATP synthase subunit epsilon # Organism: B.adolescentis # Pathway: Oxidative phosphorylation [PATH:bad00190]; Metabolic pathways [PATH:bad01100] # 1 92 1 92 92 168 98.0 7e-41 MAGSTLQVNIVAADHPVWHGTAKSVTIPASEGGMGILPDHEPVLTVIKEGTIVVVDPEGN RLSFEVTDGFISFDSNKLTVAVERGTNVKRAE >gi|148337401|gb|DS264458.1| GENE 56 75025 - 76509 1882 494 aa, chain - ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 6 488 2 480 483 672 71.0 0 MAENQTTAAPETAAEPTAGRVTRIQGSVIDVEFPVGHLPDIYNALTVELANTGVHEEGET TKKITLEVEQHLGDSTVRTVALKPTDGLVRGATVYDTGGPISVPVGDVTKGHVFDVSGNI LNKKADETVTVTERWPIHRNPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAG VGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMDEAGVLEKTALVFGQMDEQ PGTRLRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNL ADEMGALQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIY PAVDPLSSTSRILDPRYVGQAHYECANRVKAILQRNKELQDIIALIGIDELGEEDKTTVN RARKIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDD LEKKWHDMQKEYGA >gi|148337401|gb|DS264458.1| GENE 57 76518 - 77438 1123 306 aa, chain - ## HITS:1 COG:MT1349 KEGG:ns NR:ns ## COG: MT1349 COG0224 # Protein_GI_number: 15840760 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 7 301 8 301 305 211 41.0 1e-54 MGSQLALKSRIASTASLEKIFNAQEMIASSHIAKARDVALNAKPYTDAIFDAVQALVAHT HIDHPIVKKNEDNPRVAVLALTSDRGMAGPYTSSIIRETESLLARLDEQGKQPELYVYGR RGVTYYKYRNRDVAGTWEGDTDQPGVEVAESISKALLDAYMKPADQGGVSELYIVFTEFV NMVVQKVRVLRMLPVELVLPEQPESGPVPESDADAATPLYAFEPSVDEVLDAILPKYIQS RIHECLLTAAASETASRQNAMHTATDNARSLIDELTRKLNASRQASITQELTEIIGSADA LNKKEE >gi|148337401|gb|DS264458.1| GENE 58 77442 - 79070 1968 542 aa, chain - ## HITS:1 COG:MT1348 KEGG:ns NR:ns ## COG: MT1348 COG0056 # Protein_GI_number: 15840759 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 537 1 533 549 708 65.0 0 MAELTIDPTTIRKALDEFVESYKPSDTPTQEVGYVATAGDGIAHVTGLPGCMANELLTFE DGTLGLAFNLDAREIGVVILGDFTGIEEGQEVRRTGEVLSVPVGDGYLGRVVDPLGNPID GLGEIKTEGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGKT AIAIDTIINQKRNWESGDPKKQVRCIYVAVGQKGSTIASVKQSLEEAGAMEYTTIVASPA SDSAGFKYIAPYTGSAIGQHWMYNGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYPG DVFYLHSRLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSDL FNANQRPAVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAMFASDLDAASKA QLNRGAHLTELLKQPQFSPYSMEQEVVSVWAGTHGKMDDLPISDVLPFEKGMLDYLDHNT DILKTIRETEDFTADTEAALDKAVEAFRETFVTSAGKPLVEKKPDEKHTTPVEQEKIVAG EK >gi|148337401|gb|DS264458.1| GENE 59 79142 - 79969 816 275 aa, chain - ## HITS:1 COG:Rv1307_2 KEGG:ns NR:ns ## COG: Rv1307_2 COG0712 # Protein_GI_number: 15608447 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Mycobacterium tuberculosis H37Rv # 80 264 1 187 196 80 31.0 4e-15 MRGEASRIADRVSRDSLAPKLRDSGEDAWRIGNELFTITNVLDHNIQLERALTDPSRPVE DKVAVVKTLIGDDAHPLTMEIMSDLVARRWSRVSDIANAAEDFGVDGMMYYADHTNATLQ VSIELAQLHSALLNLPVVRSKLYDATVPAEARIKLLYSLIGNADFNVVTKRLAEHATCNL RNRRYLQTIQWLINKFSRHMGESMVTVTTATPLSKEQVKKLVAIYSAKTGHPVHINSVVD PTVLGGMRIQVGDEVTDNTVVAQLQHLQRTVKATA >gi|148337401|gb|DS264458.1| GENE 60 79999 - 80520 763 173 aa, chain - ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 10 170 22 182 188 103 37.0 1e-22 MVTAASEMELFLPKSYDIFWSLVILIIVAVFFYKFFLPKFQAVFDERAAKIEGGIAKAEQ AQKDADEAKAKYDAQLSSARVEASKIRDDARAEASHIIADARTRAEADAAQITATAQRSI ESQQQQALVSLKGEVGVLATALAGKILGSKLESDDVQSTMIDQMIAELDSDKK >gi|148337401|gb|DS264458.1| GENE 61 80580 - 80807 444 75 aa, chain - ## HITS:1 COG:Cgl1180 KEGG:ns NR:ns ## COG: Cgl1180 COG0636 # Protein_GI_number: 19552430 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Corynebacterium glutamicum # 13 74 18 79 80 64 62.0 4e-11 MDIVTLAEVAGNLNVVGYGLAAIGPGIGLGILIGKTIEGTARQPELGSRLQTLMFLGLAF VEVLALLGFVLAFIK >gi|148337401|gb|DS264458.1| GENE 62 80864 - 81673 987 269 aa, chain - ## HITS:1 COG:Cgl1179 KEGG:ns NR:ns ## COG: Cgl1179 COG0356 # Protein_GI_number: 19552429 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Corynebacterium glutamicum # 36 264 38 264 270 138 34.0 9e-33 MISALGEGVMTIADGPEMPSINDFLPDPFVFQGTPFAINRIILVRILATVIMLLVLGITA SRAKLIPGRWQGAVEWLIEFVRDNIVYQVMGELRGKRYVPMITTVFCTLLVFNLCGIIPG FNIAASASITLPLVFAMWCFCQYWIAGIREKGLGHFLRDEIFPKGVPAPIYILLSPIQLL ELLIIRPFSLTIRLFANMVSGHLILALCLSATQFFLVDVVNKVMMPFGIITFAAGMFMFL FEALVACLQAYIFAILTTAYINMSYPEID >gi|148337401|gb|DS264458.1| GENE 63 81811 - 82017 63 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAAKDYQPVARQHSAPGAFPYYRIAKTDVSHVAGTIRHNHGRCRFGLFHPHSHQNRHRLQ HCLIKRFT >gi|148337401|gb|DS264458.1| GENE 64 82166 - 83200 1629 344 aa, chain - ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 302 1 302 303 318 51.0 8e-87 MPIKIPSGLPARDILDSERIFALEKPEAERQRVRPLKLVILNLMPKKIETETQLLRLISK SPLQVEVDFMKTSTHEATHVSADHLVKFYETLDAFKDNYYDGLVVTGAPVEHLDFEQVDY WDEFKQILDWASTHVFSTMYLCWGAMGALNYRYGVRKELLPEKLFGVFPQYLQDEYCFLT NGFDEICLQPHSRLAGINEGDIAHNPELQVLTWGPKSGPGLIATRDFSEVFALGHWEYGK YTLAEEYERDMKKGMTNVPFPENYFPHDDPKLEPLFAWRAHANLLWRNWLNWVYQTTPYD LSEVPQLREEKRLGTDRSIRHEPGSPRVDAFTPFSHDGYGVIRG >gi|148337401|gb|DS264458.1| GENE 65 83567 - 84391 566 274 aa, chain + ## HITS:1 COG:MT2724 KEGG:ns NR:ns ## COG: MT2724 COG0582 # Protein_GI_number: 15842187 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium tuberculosis CDC1551 # 5 264 67 325 332 167 41.0 2e-41 MKKQHPSPLWAESINLWLDSLKAAGYSPNTIGTRRCQMSALSRALEGDPRDVEGDDLLAH FAAKDWKPETRKGAKNACVSYFRWLKASGRSEADPSEFLPTVKRPEPHPRPCPDVVILAA LRKATDGERLMLRLGAECGLRRFEIAKVHSRDVMRDLVGWSLVVVGKGDKQRIVPIGDDL ALLIRSANGYLFPGRWSGHVESSYVGRHLSDLLGDGWTAHSLRHRYATTTYAATRDLLLV SKLLGHASVETTQRYIAMPDDRLRAAVEATRLAA >gi|148337401|gb|DS264458.1| GENE 66 84441 - 84713 434 90 aa, chain + ## HITS:1 COG:VCA0332 KEGG:ns NR:ns ## COG: VCA0332 COG2929 # Protein_GI_number: 15601097 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Vibrio cholerae # 1 88 2 87 88 91 50.0 3e-19 MEFEYDPAKSAKNLAKHGIDFEAAQRMWDNSKTVTLTAPNPGNDDVRYIVLGMIDGKHWT AITTKRGKRIRIISVRRSRKNEEAYYDSQD >gi|148337401|gb|DS264458.1| GENE 67 84697 - 84981 373 94 aa, chain + ## HITS:1 COG:no KEGG:BLD_1133 NR:ns ## KEGG: BLD_1133 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 94 1 94 94 149 100.0 5e-35 MTAKTKPDAKAITSDQLEEMFDNGDDILDYVDMSNPVVEHHPPLEKRITLTMPAWMVGEL DEEAADLAISRNAVVNTWIADRLRTTRRRETIHA >gi|148337401|gb|DS264458.1| GENE 68 85047 - 85310 451 87 aa, chain - ## HITS:1 COG:no KEGG:Blon_1572 NR:ns ## KEGG: Blon_1572 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 86 1 86 88 125 91.0 6e-28 MTDENTDPQTAGTEPTVPDWLLPNRAYDVLKWVALIVLPAIGVLVQTLGPVWGWTWADPA ATTINAVALTIGVVIGASTLKARASKA >gi|148337401|gb|DS264458.1| GENE 69 85398 - 86630 1476 410 aa, chain - ## HITS:1 COG:no KEGG:BLD_1135 NR:ns ## KEGG: BLD_1135 # Name: acm # Def: phage lysin-like lysozyme M1 # Organism: B.longum_DJO10A # Pathway: not_defined # 1 410 1 411 411 740 96.0 0 MGKIKNKSKPLQALIAALFAVLLACTPAIAMADMVGIDVSGWQASNVTCTASYDFAVVKV SQGVGFENSSWRTQAKCVTDRGKSLGLYHYAGGNNAEAEADYFVGRARDYIGRAVLVLDW ESYQNAQWGNSDWVRRFVQRVHTLTGVWPMVYVQASALGQIPGDVRANCGLWVAQYASNA PTGYQSRPWNYAIYGEAMRQYTSNGWISGYNGPLDLNYFRGDASQWQAYANPAGAAKPVT PPPTEKPPTQTIDLQALATATIRGDYGNGQQRRDALGANYDKVMAIVNQRLGSATVATQQ TTQANTTRVTVRSGDTMSGIASRTGLWPLSRWSVPSGNLNLIYPGQVVTYNGGGSVATGS NAPPATRTVTVRSGDTLSGIAARLGIGYTQLTGYRSGNPNVIYPGEVLHY >gi|148337401|gb|DS264458.1| GENE 70 86694 - 87011 524 105 aa, chain - ## HITS:1 COG:no KEGG:BLD_1136 NR:ns ## KEGG: BLD_1136 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 104 1 104 107 191 91.0 8e-48 MNPIAQQLTVWAATGIITALGGYMLGWWRGYRRKSDAMQTGVRVLLLCKLEQMQREMVAN DGIADNTAKRTAQLVYDSYHSLGGNGHGTQVNQDIQDAPIAPKKV >gi|148337401|gb|DS264458.1| GENE 71 87008 - 87142 170 44 aa, chain - ## HITS:1 COG:no KEGG:BLD_1137 NR:ns ## KEGG: BLD_1137 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 44 1 44 44 69 100.0 5e-11 MSKAMIRVYARLVIAGRKTIDDVPEAGREAVRAYIAGLDEGSGE >gi|148337401|gb|DS264458.1| GENE 72 87139 - 87474 551 111 aa, chain - ## HITS:1 COG:no KEGG:BLD_1138 NR:ns ## KEGG: BLD_1138 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 111 1 111 111 172 91.0 3e-42 MLQTVSSLEPLEEVSYYPRGDGLADIRIRRNITTVMHGDGETAWTEYTADEAYTIRDLTE QEAIEQADSIWLDCVQASKSDSQRLAGLEASSLDQDEALAEIYQLLSGGEA >gi|148337401|gb|DS264458.1| GENE 73 87300 - 88940 775 546 aa, chain - ## HITS:1 COG:alr3497 KEGG:ns NR:ns ## COG: alr3497 COG3344 # Protein_GI_number: 17230989 # Func_class: L Replication, recombination and repair # Function: Retron-type reverse transcriptase # Organism: Nostoc sp. PCC 7120 # 147 466 26 342 352 71 25.0 4e-12 MGGEAKRGGESPLSTFRNSLGFVAVRLRRPCVVQRFGNLRDGAACGAFAANLRNDLANRR WNIGGRISGTCQRIYAITPQLPSTPASERASHGPAENQTEHPAGRRTHPAPSNAGIVQIG NALKTHCKHTRCATPMFVRRAIDHYLKGKRSRRDVTRFLETHPDLDRLAERIADEIREGR YRDTRITYFNRVEPISGKHRVIGRESVRHQIYDHVAVMALQPLFDAKVGRWQTASIPNRG TIDARRAIKRWTRERSSKWFVKLDVRKYYPSIDRPTLKAMLTRDVGDPILLRLVFHLIDR YQGDNGLNIGSYLSQWLANYYLSHAYHWIESPAMTIERTSRRTGEITRRRLITHQLWYMD DLLLIGTSKRDLKIAARRIVRYLKDALKLDVHEEWNCKRLDLEPIDMVGYTFRPHGRVNI RSGLFLRARRTFNRARRRPMTEQLARRCCSYYGYLRNSDSIRYRRRHRIDHTMRRATRYL STQHRKENPCSRPYPASNPSKRSATTRAATASRTSASAATSPPSCTGTAKPHGRNTPPTK PTRSAT >gi|148337401|gb|DS264458.1| GENE 74 88951 - 90531 1776 526 aa, chain - ## HITS:1 COG:no KEGG:BLD_1140 NR:ns ## KEGG: BLD_1140 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 526 1 526 526 910 89.0 0 MANTQKVMTLADTAKLIAKVHANAAKGVRFEYDGTKGEYGNIAAYFAAHKDGKVYGVRFP KYTYSNTPTGVKTRDNANLTIEISTNAKAGRDDYAPLNAFRTWDVNATVDDDGVPHVTAI DGIDTRFKRDGSNGDVYVMTCPGYYKLESTSTHNEFLYSDTQYDGYAPLPGVLLPDGSKR PCLLFAKYAASLDSQQRPLSVSGKEIDREFGSQNRAIDYALKKGKGYAGRCAGDTFYVQL MLMLKYATKNSDVLGGCWQYTPQTAVTKAETGVKRVIIATSYANNFDVGSTVNVGTDKER NNTGNYSAARARTILSKTAIDASNTALNLDGDAITTTTACFVNSMPWKTGATDKLLGTDG RPSTASAANHQPIRLQGIELFNGIYESDADLIANAVKDNDNLGRIELYRVFDITKASKTS TANYTKIGEFTARDKTTNDSWRYAEDFTLSNGVIIPTGLNATSTTGMCDAIGANPLTSQG LRQVLRFGGLGGGAACGAFAAGLWNGLAIRRWDIGGRLSALGRTKA >gi|148337401|gb|DS264458.1| GENE 75 90548 - 91270 918 240 aa, chain - ## HITS:1 COG:no KEGG:BLD_1141 NR:ns ## KEGG: BLD_1141 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 240 1 240 240 380 97.0 1e-104 MATLDSFREATGEPIQLDLANGYIADIRLNAGDNNGRTITVELTDNGTPITSTDGITCAL AYNTAPGSGLGDRVSMPAVFGTTTATYRVAVPRKALQHAGAILMGIEVSVNGTKTCSRNF HGIVERAVFDATAPDAQDQMGVLDKLIDDATTAINKAVSAAGEAKDAADAARTSVIEYRQ LSDDCKAKIAASAAAGVVFATQSDIDTQYDSVIAPALSDAETIPPLTQSDIDWALDIINR >gi|148337401|gb|DS264458.1| GENE 76 91257 - 91424 276 55 aa, chain - ## HITS:1 COG:no KEGG:BLD_1142 NR:ns ## KEGG: BLD_1142 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 55 1 55 55 76 96.0 4e-13 MDDKNLYPAMIGKLREMIADSTIQIAALQAQIDILAKENQRLTDQLNKDDDNGNA >gi|148337401|gb|DS264458.1| GENE 77 91424 - 92026 546 200 aa, chain - ## HITS:1 COG:no KEGG:BLD_1143 NR:ns ## KEGG: BLD_1143 # Name: not_defined # Def: phage transcriptional regulator # Organism: B.longum_DJO10A # Pathway: not_defined # 1 200 1 198 198 192 84.0 6e-48 MQITTINGQPTLLIDRPLTTADTTPPAAVTDGMTTITTTPPTPGMRHDAIPLAAIASWRT LLGIENDTEAVAAILHVRSNGEPDTDPDTGENAWTSAYNAIETAINAHTTTALADNTPDD QLTAGRNKTRGLLGLPPLPSAATTIASADETDTPTTIALPDGVESTELGNLLADHADDIA TATDRFIESLTRTDNGKDHD >gi|148337401|gb|DS264458.1| GENE 78 92035 - 95835 4803 1266 aa, chain - ## HITS:1 COG:no KEGG:BLD_1144 NR:ns ## KEGG: BLD_1144 # Name: pblB # Def: phage tail fiber protein # Organism: B.longum_DJO10A # Pathway: not_defined # 4 1266 1 1239 1239 1829 80.0 0 MRYMIFDRWGNPLGDLPYAIKAIRTRATDGTDTLDITTIGEINKDERIAFKDSMGLWAEY LCQSTQTARAAGMPVTVAYCTGSIAELSRTYIEDKRNRNANAKACLAKALEGTRWAVGTV ETGTITGTANLSFYHCTALDAIQKTADTYGLEVQTEYQPDPTGNQIGRRIIHLVEHRGTA NTTKRFEYGKDLTQIKRDIDSGDVITRLYGWGKGIEQTNDQGEATGGYSRKISFADVNNG KPYVQDDQALANWGIVGADGTRHHSEAAVDFPDCEDPKELLTLTKNALKTRATPVVSYTA DVTALGQAGLSAEGADVGDSVQIIDTSFATPLRLEGRILQIEEDLAGSLADTKITLGNIR QSYTQRLAAQQQALDKLVSNSGAWNSAAGGTGPYMKDLIDRINQIMNATGGYTYLKPGQG IYVYDKPEDQNPTQCIHIGGGYWRIADHKKANGDWDFRSLANGKGLFADTIFTGRLSDAA GLNHWDMDTGEFSLSARSTVGGKTVQEYADGALSDANSYTDAAKQAAITEAKRQADAADT AKLAEAKKYAEAKAGEAETAAKAQSKADGEAAKAAAQAYVDALDESLGQRSIFDRLTNNG QTQGIYLSGGLLYLNATYMRTGVLDAALVKAGRLTDKKGLNFWDMDTGEFSLSASSTVGG NKASSLATQTQAQKLATNAQTAAKAYADSVGTSTLNSARNDATTKADTALSGAKTYAETI MAYGSNLVRNPNGNPDHDLDKLGASKLTKTMPAAHPEGITSAIRLGNVRDTYFGWSFDSF RGHTFRLSGWAYRKAGNVTSSFGIHWMDASGSNHWQTIAKAAATASGWTYVSGSYTVPSN AKTARLWMQVDRDTTTASDADWYWTGLQCTDETAARSYVDTFEGELTQTYIFNKLTDNGQ KQGLYLSNGLLYVNATYMRTGTITGKRSYWNLDTGQFAMTNSDGKETVHFDGDGANNLLT GTFQTASTGRRVKISPDFNSYEIGGTETYKGSGISFPLDGTYASSPSIFSYSNDNKNDTM SGIALLSGYRTKGTPGAFGRLWSRKYPSDTSAIESQAYFTTNTKYSDATDTDSGGSLNLY SRQAYGGEATLNAWSPSAACIAGVKATGSKAKAYATAADSNGEVGMIADISTGYLHLGGF LGGIDGRHTFLGAWWENVNGTAMKYHQFTFTAPAPAKYGSYKALATVDHRGDDWALIWST VSDCTASGWLIWVSTGPAQVVTNVNAHWNHNTSTGVVSNLSINVDNTNLFNGTKNYYLNT IGFLKK >gi|148337401|gb|DS264458.1| GENE 79 95846 - 96628 1019 260 aa, chain - ## HITS:1 COG:no KEGG:BLD_1145 NR:ns ## KEGG: BLD_1145 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 260 1 260 260 407 85.0 1e-112 MLYQRRMRLPHVEDPTLNGVPLERMMLSLSSDGVTIDAAKPTLSMQDMPGRDGRLDLTLT DPTGAAYMGDRAITLSLYAIGGEDDILAAKTRLAALAGTIVSLSWRSLPGEYQGRMSLGA WEDKWAGDHQIATLVQAEIDAHPYLIGRSRSIALKTDANTIHVKGNRPCWPTWTLTPAAD AKTVSIKDAHGHKLAVTSTTAITGRISIDTDPDHRELRVNGNLMTPTLESDYFPLLPGLN TLTLTGATAASLAYRPLTLI >gi|148337401|gb|DS264458.1| GENE 80 96648 - 99713 3543 1021 aa, chain - ## HITS:1 COG:BH0960 KEGG:ns NR:ns ## COG: BH0960 COG5412 # Protein_GI_number: 15613523 # Func_class: S Function unknown # Function: Phage-related protein # Organism: Bacillus halodurans # 469 935 95 497 584 134 24.0 1e-30 MAIEIATAFVQIVPSMKGVGKAIESAFGSASETAGNTAGIKAGNGFAGGFGAKLGVITGI AQSVAGKAIEAFMGLSGEITSASDSAQKFASTLNFAGVSEQQIKRLTASTQDYADKTVYD LNDIRNTTAQLAANGVPNYDKLAEAAGNLNAVAGGSADTFKSVAMVLTQTAGQGKLTTEN WNQLSDAIPGASGKIQQALKEAGAYTGNFRDAMADGQITAQEFNDAIMSLGFTDAAVEAA TSASTIEGATGNLEAAFVKLGASVLDSVKPAITGGMSWIADGVTNAVPVVQAGIEGLIGW FQRLYSKLEENGAITAFKSAWDTIRDAIMGVVNMVIDWAHLIPPEGLADGIKLVADTLNW FIQHGKELAPIIIGIGTAFAAVKGYQALNSGLQALTGTMNTVTTAAKGISNGIMLMMDLG GPIQMLKQMGSSLSLVKTAQTAWSAATKMATAVQGAFNAVIAANPIGAIAVAIAAVVAAL VWFFTQTEVGRKAWAAFTSWLTDTWNTIVATAQDLWNGLGEFLANLWATITGTVQSAWDG IAGFFTGLWQTISGGITGAWTSITTFLSGVWTGISTTATTIFTGIRDFIVNVFTVIGALI VAPLQAIQNGINTVFGWILSFITQQMNSTNTVWSTIWTAIYNVVSTIFTLISGYISTAVN AIRTVIAVFLSFLKGDWQGAWDAIKDFFTTTWDGIKAFLSNILDGIKAVWTTVWTAISTF FTDVWNKIVAFFMPIINGIRTTIGTVLNAIQSVWTSIWNAVRSVASTIWNAISGVVSTCI QNVSNTISTVLNAISGVWTSVWNSVSSYLSNIWHGITSAVSNGIQSVSNTVGRIRDTVLG AVSGAGRWLYDTGRQVIQGLINGIGGAFQWVRNTISNLGSSLVGWAKSVLGIHSPSRIFR DEVGKWIPAGMAQGIDKASGLVEDSIDGLTDMIPTVSLKTDTSMLETPYAYQTRITGGRM AYTIDSSQGEYATKQDIIDAIDQALSSGITLNLSDRGGEVMAGKLAKPMSYELNSLAMRG R >gi|148337401|gb|DS264458.1| GENE 81 99715 - 100107 433 130 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488058|ref|ZP_02029175.1| ## NR: gi|154488058|ref|ZP_02029175.1| hypothetical protein BIFADO_01628 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01628 [Bifidobacterium adolescentis L2-32] # 1 130 1 130 130 205 100.0 9e-52 MLATAPDALEADFQRFYGLNTDLIWTGELPANRAAALAANLPRQSIIWQKLNPRLAWDDQ TYLLADIRDSLAFLAWTKTKEASRKGARWRGQLQRPGTVRHEATGGEVMAMDDEQLAAYL AAPRTTIREA >gi|148337401|gb|DS264458.1| GENE 82 100119 - 100439 487 106 aa, chain - ## HITS:1 COG:no KEGG:BLD_1147 NR:ns ## KEGG: BLD_1147 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 106 1 106 106 181 89.0 8e-45 MAAKQPQDHKTPKNQPKTVEAMGVTLAVSPAIFDDLDMVEYLYDLQTAQSGNGAGAFAIV PFLKKLCGPQYTAMKDALRDPDTGRVSIDKVSEFIAQLLEQVAPNS >gi|148337401|gb|DS264458.1| GENE 83 100493 - 101080 914 195 aa, chain - ## HITS:1 COG:no KEGG:BLD_1148 NR:ns ## KEGG: BLD_1148 # Name: not_defined # Def: phage major tail protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 195 1 195 196 308 94.0 6e-83 MAETNHNNKKNVSLGKPKKTGCLYYAPAGTALPTDATTALPTTYTCVGYLSEDGVTNATD TDTTDINEMGGIKVLSEISGYGETWQFNMIETNEASLKLRFGTANVTSTADKLTVYHAIP SGESLVLVFEIAMTGNRVKRIVVADGTITEFDDTTYSAGDAIGYGVTMSANPSDLINGAT SVEYIANVATASLSK >gi|148337401|gb|DS264458.1| GENE 84 101112 - 101477 284 121 aa, chain - ## HITS:1 COG:no KEGG:BLD_1150 NR:ns ## KEGG: BLD_1150 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 121 1 121 121 155 86.0 4e-37 MALNLEKTVKDWIDADPNGDGLTAYLEVPADRPQRFVTIERVGGRELEYSSRPTIAVQVW AETRWQAAQLATGQVLPRLLDLDLLDSIAAVTVESVIDFPDPGPPPQPRYQITIQLDAAT Q >gi|148337401|gb|DS264458.1| GENE 85 101479 - 101736 485 85 aa, chain - ## HITS:1 COG:no KEGG:BLD_1151 NR:ns ## KEGG: BLD_1151 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 84 1 88 91 62 60.0 6e-09 MAKVKLNLAGFRQIRQSAGAMHAITEQAKRIADTANELAQTKNAHYDHAVARTTDHGSVA LATTKGSGAAAYDNAKHNTLLKAVG >gi|148337401|gb|DS264458.1| GENE 86 101748 - 102083 438 111 aa, chain - ## HITS:1 COG:no KEGG:BLD_1152 NR:ns ## KEGG: BLD_1152 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 111 1 111 111 187 87.0 1e-46 MRGETITLIHRTPAGHDPGGGIIWNTHEEQIDDVLIQDGSQSNLTDSTRPNGIQVAKTIH MPRAWPYQSLRGAKARIDGVEYTVIGDPRPYDGGLTPTRWNLTVELADTRG >gi|148337401|gb|DS264458.1| GENE 87 102080 - 102529 665 149 aa, chain - ## HITS:1 COG:no KEGG:BLD_1153 NR:ns ## KEGG: BLD_1153 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 148 1 149 150 219 87.0 3e-56 MDGYPLQPFNLSGNQTDGGTGGDSAVDDGEPFAQVGDLEARWHALTGEEYKRAEALLADA SDLIRTTCPRWPAAKPATLKRIACMVVKRAMQAGPDMSGVTQSTQTAGSYSESLSYANPA GDLYLTTSEKEALGGDGEAWAYDMAGGAT >gi|148337401|gb|DS264458.1| GENE 88 102541 - 102906 413 121 aa, chain - ## HITS:1 COG:no KEGG:BLD_1154 NR:ns ## KEGG: BLD_1154 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 121 1 104 104 91 76.0 8e-18 MAAPLTQTLVVQEHDEADETGLSIPVRLVKPDGTPFAEGVATIAWSAITGKPSTYPAAAP AWSAITGKPSTFAPPAPTTSARGGVLQQAAEPQLAADADSAAIIAKVNSTLTKLKAAGVL A >gi|148337401|gb|DS264458.1| GENE 89 102906 - 103811 1351 301 aa, chain - ## HITS:1 COG:no KEGG:BLD_1155 NR:ns ## KEGG: BLD_1155 # Name: not_defined # Def: phage major head protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 301 1 301 301 531 93.0 1e-149 MALDTSKVLLPKEVATVITKRAKDTSTIAALSPSEPQLFLDKEYMVFTGNSEAEVVAEGE QKSSYEETLAPVVGKRFKVQTTTRVSNELQWADEDAKLEIISKIQADQAAAMGRVLDYVI YHAFDPKNKTTLEGFNALAKSAVSVPATDDRVADIDSLAEAVSDEYDINGIALSKTMANE LRKIRVPSTGQRFYPEIPINLQVGNLDGIPAATSGTVNGRLVTPATGILAFLGDFRLIKW GMVRDIWSEIIEYGDPDNTGKDLKGVNQIAYRTEAMYSYAILDPKGIAVLKKSTSSVKAS K >gi|148337401|gb|DS264458.1| GENE 90 103842 - 104375 759 177 aa, chain - ## HITS:1 COG:no KEGG:BLD_1156 NR:ns ## KEGG: BLD_1156 # Name: not_defined # Def: phage helicase # Organism: B.longum_DJO10A # Pathway: not_defined # 1 172 1 175 177 141 61.0 9e-33 MFLNLQHPNIRYIAPPVEGGSDTPNATPPAEPNGNGEEIDWEAKYKEALGHSRDWEKKAK ANEAAADELEKLKESQMSEADKAAKRTQELEAQVAAYKAKEQQAEWKAQVSAKTGIPAEA LRGSTLEEIQAHADILKPLVHPAPKLPNVPNPAQHPEGKTADERAKAYVRSLFGNKD >gi|148337401|gb|DS264458.1| GENE 91 104501 - 104731 400 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488068|ref|ZP_02029185.1| ## NR: gi|154488068|ref|ZP_02029185.1| hypothetical protein BIFADO_01638 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01638 [Bifidobacterium adolescentis L2-32] # 1 76 1 76 76 135 100.0 1e-30 MSEEEYFTQHHNDNTDLLLLDYSERFETPYFNIEDTGVTLTDTELRADLLHCLYHNKPKD HIGQPSRNLIALALAD >gi|148337401|gb|DS264458.1| GENE 92 104728 - 106287 1800 519 aa, chain - ## HITS:1 COG:no KEGG:BLD_1157 NR:ns ## KEGG: BLD_1157 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 5 250 7 255 451 283 56.0 1e-74 MDSNSLPLSNLSPAQRKAFNGHLNDMWDDYQDELADLIIEAKTMVPNSLYFGDDPTTEAR RQLEDYARKANLIAQDYYRNVRAAWAEAAGISMPDYKEAQVSSDRAFWQIVGGYNNTMHV GAKFTDVINGRSKAGLTMDHLWAINTRGYTEDDWARLAKDVINETARLTGRFTAQNDPTR PKYARVPQGKTCAFCAMLASRGFVYASEDTAGKWHRYHHGCDCKIVPSWGETEIDGYDPD KLKAIYQQAKNAAKAAGDGSDPNTVLSWMRSESPDMFTDGSEFAPDLRIPRGSRLEQQLG EAYTRRVNRLLNKTEHKDAARLWAKYAAQYDIKETRLPKGAYFSPSDGGIHLNLDTVMAG DNAHRPVQNLFHESGHMLDWLLDKNSFSWAPHNGKLFNDVLKRDAQRIFDTTQATLMAED KPAGRQSVMKAIAREIATNSAKTDRNVEDMLQAALGDDYHGSVGHPKGYFRQSGQLQSTE AFAEMLDAQMANPEAWRLIANYFPESAKMFNTMIQEALS >gi|148337401|gb|DS264458.1| GENE 93 106238 - 107710 1702 490 aa, chain - ## HITS:1 COG:no KEGG:BLD_1158 NR:ns ## KEGG: BLD_1158 # Name: not_defined # Def: phage portal protein # Organism: B.longum_DJO10A # Pathway: not_defined # 12 490 17 500 507 598 67.0 1e-169 MNTDDVPILRGQAGWLAIESAYANTITGVDPDDQPTINELLKQWRRHYTRNTLRTSYYLA HYHYKGVAYSIPPAMKALAKPMIGWPNKAVRALADLSVFEGIDAPETLQTQVDDLVAANT FGVKIQQAIVSAYTHGCSFMTISGDGDDIRITPRAADWSSAIWDWGNDRIGAAMTIRDKD KDGYITRFDVWLPGKVYLCRRNGGTWQAERIETGFDRPTVVPIVSDQQLYRPLGSSRITR PLMALTDLGLRTLVRMEATAEFYAAPRIWFLGANKGQVSPDTWGSIVSVINGIPAGRNGE KPELRQLTQASMQPHSDMLKTVALMVSSETDIPVNDLGITMDNPASAEAMAEAERKLSRT ADRQNKRFGESIKSILAMALAAQGADEADIRQLRPIWAPTKEASDAARADWYQKVASTNP AFADSDVGLSRAGLTWDEIAAHRAYEKQQRTQNAIDELRAKIATAKTDTQEAAANGQQQP AAEQPQPGAA >gi|148337401|gb|DS264458.1| GENE 94 107713 - 109146 1364 477 aa, chain - ## HITS:1 COG:no KEGG:BLD_1159 NR:ns ## KEGG: BLD_1159 # Name: xtmB # Def: phage terminase large subunit # Organism: B.longum_DJO10A # Pathway: not_defined # 1 477 1 477 477 897 94.0 0 MSTRIDGAACQIIPDELYTSGEPSLNKLANAAGDRFDPWQRQINRIVLAKSADGFWSARN AVLSIPRQTGKTYDIGWVAIHRAARTPGMRIVWTAQHFSVIKDTFESLCAIVLRPEMSGL VDPDHGISLAAGKEEIRFRNGSRIFFRARERGALRGVKKIALLVIDEAQHLSDSAMASML PTQNRAYNPQTIYMGTPPGPRDNGEAFTRLRDKARAGRTHSTLYVEFAADRDADPLDREQ WRKANPSYPAHTSDESIANLWENLTGDDFRREALGIWDEHALSRAIDRRQWEEATIDARR PGGVMSFGIDMNPQRTRLTIGACMRYDDGTAHIELAEYRDTNHDGTMWAVNLIDKVWEQT AALVIDGQSPATALLPDLAEAGITVTVTAATDMGRACGRLQDMLRDGTLTHLPEDGQQPL WQAAAKATTRPIGKNGLFGWNRPDDDTDISPLNAVTLALHGAMTTRRDPTAQQEAWY >gi|148337401|gb|DS264458.1| GENE 95 109130 - 109318 142 62 aa, chain - ## HITS:1 COG:no KEGG:BLD_1160 NR:ns ## KEGG: BLD_1160 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 62 36 97 97 80 95.0 3e-14 MRNLIAEKLDEGSISSRDLASLTKRLADISAEIEAIDKASNEHDPAMQALDTEDERLNEH ED >gi|148337401|gb|DS264458.1| GENE 96 109508 - 109801 222 97 aa, chain - ## HITS:1 COG:no KEGG:BLD_1161 NR:ns ## KEGG: BLD_1161 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 97 22 118 118 191 96.0 7e-48 MRADCYICHRPIDYELKAPHPYSFVVDETIALARGGTLTHDNSGPAHRWCNAIKGTHSLA WARERVAQLITQGKAPQRAAQVSAGPIRCSDWFGGGE >gi|148337401|gb|DS264458.1| GENE 97 110195 - 111037 621 280 aa, chain - ## HITS:1 COG:no KEGG:BLD_1162 NR:ns ## KEGG: BLD_1162 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 8 280 2 273 273 434 79.0 1e-120 MNQQACAACGHQSDEDRNLCDECTKEWARRLAWLLKAGMPALQQIAYKQATTRERSPRHG NTAYAAPPVNETAQALFNTVEVHLQLMGGMLNITPLGYDRYDRPRTLRQWAELIRLLLHH MGALAGLDSAGDLYADTTRLAEKVDAATTRTAERRLIGVCPDCLNERDEHGEPVRTPIYA AQSSRYAVCPVCGAWLDLKRIRLEYLRSAGLMHITRTQADAARWIRENTGVNVTGKDLAN WRSRGKMPSTRRIDRHYWEWNIMELLACAQDRAERDHGDV >gi|148337401|gb|DS264458.1| GENE 98 111184 - 111411 374 75 aa, chain - ## HITS:1 COG:no KEGG:BLD_1163 NR:ns ## KEGG: BLD_1163 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 75 1 61 61 70 62.0 2e-11 MKVTTGIRQIIEDWHTKGVSPEETAQSLRIPIDEVKAIILQAHPAPPQPKRHEFLEPHLP ALEEPANIWDNRKES >gi|148337401|gb|DS264458.1| GENE 99 111408 - 111641 276 77 aa, chain - ## HITS:1 COG:no KEGG:BLD_1164 NR:ns ## KEGG: BLD_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 77 1 76 76 105 75.0 6e-22 MNNIDTNVTAYQLGPITIMRGTATPTHKVAHPECFGRFTVIALSPATAIRKCMRRVARMC ADCSAREQLDQQEGARA >gi|148337401|gb|DS264458.1| GENE 100 111638 - 111868 114 76 aa, chain - ## HITS:1 COG:no KEGG:BLD_1165 NR:ns ## KEGG: BLD_1165 # Name: not_defined # Def: WhiB family transcriptional regulator # Organism: B.longum_DJO10A # Pathway: not_defined # 1 68 1 68 68 117 83.0 1e-25 MNWRHQAACRDHDPELWFSGNPHEQAAALAVCRQCPVIDECRQFADHNNRINGYPLQGIW GGRQYGVKGRPRKAQQ >gi|148337401|gb|DS264458.1| GENE 101 111865 - 112116 387 83 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488080|ref|ZP_02029197.1| ## NR: gi|154488080|ref|ZP_02029197.1| hypothetical protein BIFADO_01651 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01651 [Bifidobacterium adolescentis L2-32] # 1 83 1 83 83 151 100.0 1e-35 MQVSFTAHAPNHSMLTIQQRLEAAGFTNVHVNAISDSTQPFTRTNPETIQAYEEGKQLME ARYGRFDAMKEARHINPYRDGDR >gi|148337401|gb|DS264458.1| GENE 102 112116 - 112331 321 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488081|ref|ZP_02029198.1| ## NR: gi|154488081|ref|ZP_02029198.1| hypothetical protein BIFADO_01652 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01652 [Bifidobacterium adolescentis L2-32] # 1 71 1 71 71 137 100.0 2e-31 MSDRIRLTPAMRDLLLEIWQNGSAYPLDRNHKRTFEALEARDYIEHVTWGRWQITPLGEI VAKQLAKKGNR >gi|148337401|gb|DS264458.1| GENE 103 112328 - 112540 279 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488082|ref|ZP_02029199.1| ## NR: gi|154488082|ref|ZP_02029199.1| hypothetical protein BIFADO_01653 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01653 [Bifidobacterium adolescentis L2-32] # 1 70 1 70 70 119 100.0 8e-26 MPIVVASFAALAVGYGLGEQAQLGEQEAQTVTQEVRHTGDVKRLCLTVKTGGRIDAITCQ VLDDMTGALS >gi|148337401|gb|DS264458.1| GENE 104 112573 - 112902 519 109 aa, chain - ## HITS:1 COG:no KEGG:BLD_1168 NR:ns ## KEGG: BLD_1168 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 109 1 109 109 129 64.0 4e-29 MSIDLTQQALNALADAGLGNDTPAEAYVIGYTQGHNDALALAIRIEQAITATPLTPDELD LLALALWEANGERPTVYESGKAVADDVLEWWKQVAASAWGFINGTEAMQ >gi|148337401|gb|DS264458.1| GENE 105 112899 - 113117 334 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488084|ref|ZP_02029201.1| ## NR: gi|154488084|ref|ZP_02029201.1| hypothetical protein BIFADO_01655 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01655 [Bifidobacterium adolescentis L2-32] # 1 72 13 84 84 123 100.0 5e-27 MTRIRIMCDQTDGTTIKLGTIQSDETGDTLYSAHPSLTQDMYRGTITLALLRWIGHLEQF SQITNQQDKDDA >gi|148337401|gb|DS264458.1| GENE 106 113114 - 113299 71 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488085|ref|ZP_02029202.1| ## NR: gi|154488085|ref|ZP_02029202.1| hypothetical protein BIFADO_01656 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01656 [Bifidobacterium adolescentis L2-32] # 1 61 1 61 61 110 100.0 3e-23 MSSQYCKPAGSDPVWRCPVCGQWWRLDLPNGDFWEPISTLKAFLLYHPKWRAERRHRKAS A >gi|148337401|gb|DS264458.1| GENE 107 113296 - 113499 192 67 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488086|ref|ZP_02029203.1| ## NR: gi|154488086|ref|ZP_02029203.1| hypothetical protein BIFADO_01657 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01657 [Bifidobacterium adolescentis L2-32] # 1 67 1 67 67 125 100.0 1e-27 MSEQVGKIFTRQDVADALQDAFLRFDTCTSADPDQYSFTIEGRHLMIDFIFEHYGIPTDI SELEAGQ >gi|148337401|gb|DS264458.1| GENE 108 113496 - 113801 380 101 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488087|ref|ZP_02029204.1| ## NR: gi|154488087|ref|ZP_02029204.1| hypothetical protein BIFADO_01658 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01658 [Bifidobacterium adolescentis L2-32] # 1 101 1 101 101 187 100.0 3e-46 MSIITNEIEERYPYPDNGERPTGITRLGQCLASRKAYRAGVCRKITDREIDAAALAVYTG TSGMGFEEVEPLWSKLNPDAKEQYRRLARLAITAARTEALK >gi|148337401|gb|DS264458.1| GENE 109 113798 - 113962 244 54 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488088|ref|ZP_02029205.1| ## NR: gi|154488088|ref|ZP_02029205.1| hypothetical protein BIFADO_01659 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01659 [Bifidobacterium adolescentis L2-32] # 1 54 1 54 54 90 100.0 3e-17 MSFHQWLETQLADIRQAQLDATLQGNNPLIQTTSIKERCLTEVLEAYESMEGTR >gi|148337401|gb|DS264458.1| GENE 110 114012 - 114194 132 60 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488089|ref|ZP_02029206.1| ## NR: gi|154488089|ref|ZP_02029206.1| hypothetical protein BIFADO_01660 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01660 [Bifidobacterium adolescentis L2-32] # 1 60 1 60 60 93 100.0 4e-18 MSTHTTTPAPQTIELIRRLLEAAHRPEPANDPTICAICGAPLTDTTSSICPDCQELEKDW >gi|148337401|gb|DS264458.1| GENE 111 114191 - 114424 279 77 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488090|ref|ZP_02029207.1| ## NR: gi|154488090|ref|ZP_02029207.1| hypothetical protein BIFADO_01661 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01661 [Bifidobacterium adolescentis L2-32] # 1 77 1 77 77 156 100.0 5e-37 MNPRKRIPATLTAILAILALTACGETPKGDGQGTVNNPDPGYVRWYELPDGSAAVRCFSN SGGASCDWEHIKLKDKQ >gi|148337401|gb|DS264458.1| GENE 112 114421 - 115059 760 212 aa, chain - ## HITS:1 COG:no KEGG:BLD_1173 NR:ns ## KEGG: BLD_1173 # Name: orn1 # Def: oligoribonuclease # Organism: B.longum_DJO10A # Pathway: not_defined # 1 211 1 213 214 217 55.0 3e-55 MNTQHDITVSGKPLNPPKPPAKPHMLLWIDTETTGISRTNAKLLEIGMIVTNLDGIEEHD RFICPVRPDKLSLYDLDPKVLRMHLDNGLLDTVMETEPEEFGYANVARNLGAFLDTEASQ YVLHPAGTNVDYDIDVLTNQLGPHLHPDWLRQLTNHRKLDLSTYRISDLALDHNPYQNHA GTHRVQDCIRRDRNDYANYLDIMRAGIQGARS >gi|148337401|gb|DS264458.1| GENE 113 115056 - 115454 205 132 aa, chain - ## HITS:1 COG:no KEGG:BLD_1174 NR:ns ## KEGG: BLD_1174 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 132 1 132 132 245 96.0 4e-64 MSTKPTDETRRIVQRRDRYRCAICDRETGSHWSGDSIHHREPRSHPFDRLHQPENLLQLC GSGATGCHGWVHAHPARAYRLGYLVHMGKDPATIPVYYRTGGWQQLNADGTRHPCPPPED LPAHIDIKKGNE >gi|148337401|gb|DS264458.1| GENE 114 115451 - 116506 991 351 aa, chain - ## HITS:1 COG:no KEGG:BLD_1175 NR:ns ## KEGG: BLD_1175 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 14 351 13 338 338 294 52.0 5e-78 MTWFMIDDGIYDAPQCEELPLSAIGLWAMAGSYVGRQLRHGDYDGAITMQRVRKLGGSPK LARQLVDAGLWRETEPGVFEIVAANPDGTMLCKYAATKELQEKRARAGRAGGKASGRSRR SKNEANASADSEANAKQMLQPDEANDEALAEAKGEANAKQTGKQKRSTLTYTYTHTDITS PNPSTPTPEPEPERTTMAELEARMLEDPFETAWNAYPRHTGSKTEAEKAWNLVVQGVAGR PPADPRQLIGSVIAYAKTVDEPKYAPNMSRWLRQGAYTDTMPSQPKPYRHALPDGTVIDD RWITSHIRDHVPVGTFTDSMRTDFWACVKTGIDPEQKAKEIINECQRKAQR >gi|148337401|gb|DS264458.1| GENE 115 116532 - 116948 606 138 aa, chain - ## HITS:1 COG:no KEGG:BLD_1176 NR:ns ## KEGG: BLD_1176 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 3 138 4 145 145 99 43.0 4e-20 MAKNKSKGVQDTLIPDEITPLQLLPLSAAAGSVKKAASAFRVKASKLLECADKEEYIERY KGISPYVEALYDADELAQRIIDEATVLDDLMTYPNSTRHRIMLDDLKRSLDPFGELPTTD DDGNDGGETVDPDTGEIE >gi|148337401|gb|DS264458.1| GENE 116 116962 - 117498 637 178 aa, chain - ## HITS:1 COG:ML2684 KEGG:ns NR:ns ## COG: ML2684 COG0629 # Protein_GI_number: 15828449 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium leprae # 1 178 1 168 168 151 48.0 7e-37 MAGETILTIVGNLTADPELRTTGTGTQVCGFTIASTPRVWNRQANQYEDGQSLFMRCSAW RDLAGHCAQSLSKGMRVVATGRLSQRSYQAQDGTNRTVVEMTVDEIGPSLRYATAQVTKQ GGHDGYQGGSTFGNPNGQSPQQQQPQQTTPPPASDPWANGGSGYTPDTFTTDTGDPEF >gi|148337401|gb|DS264458.1| GENE 117 117498 - 117980 706 160 aa, chain - ## HITS:1 COG:no KEGG:BLD_1178 NR:ns ## KEGG: BLD_1178 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 160 1 160 160 233 96.0 1e-60 MTSNKEMAEKLAEKFYGLIEGDVSVSDGELAKLFVTALDQAGLALSEKAKAYIAVEPVLP NGKTLADMFASSDRKPLGAVIDDEDDEEEGDGPDDAGELDGLEHMRDVADMAYAALSDLA LHCHNRREDVAWGIASSAAKDAHVLATFVGDWIEDMEDED >gi|148337401|gb|DS264458.1| GENE 118 117977 - 118216 202 79 aa, chain - ## HITS:1 COG:no KEGG:BLD_1179 NR:ns ## KEGG: BLD_1179 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 79 1 79 79 146 92.0 3e-34 MNTHRSLMIWPITERGLTMTPGELIAETLDAICECNSRLDYPRLILMPSPAAFVIDRSTA TIGAECEWAWKRDIRKGKS >gi|148337401|gb|DS264458.1| GENE 119 118561 - 118719 212 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488098|ref|ZP_02029215.1| ## NR: gi|154488098|ref|ZP_02029215.1| hypothetical protein BIFADO_01669 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01669 [Bifidobacterium adolescentis L2-32] # 1 52 1 52 52 68 100.0 1e-10 MSLCWQQITFCAVALVLVLANVGTAQKRREKPSTTVSSVCLWVALCLLVLSI >gi|148337401|gb|DS264458.1| GENE 120 118716 - 118907 357 63 aa, chain - ## HITS:1 COG:no KEGG:BLD_1181 NR:ns ## KEGG: BLD_1181 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 59 1 59 60 89 71.0 5e-17 MFKRYPYTIGLLLVVSIVCCLAWLLTHDACMHPLGNGLAAWWAFVNAPLFLIGLIEEAGG ESE >gi|148337401|gb|DS264458.1| GENE 121 118918 - 119817 1194 299 aa, chain - ## HITS:1 COG:VNG6208C KEGG:ns NR:ns ## COG: VNG6208C COG0330 # Protein_GI_number: 16120147 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Halobacterium sp. NRC-1 # 51 292 31 273 289 86 30.0 6e-17 MIWFVISIVLLLFSAAVTCVAMSRDVKGAGIGLIPGLVGLMLLIPACLYSVDVGEVAVIR NMGGSLAGHSEDAGFHLKTPWQSVIKYDTRNNLINFYKDTDYKYDGGSAVGKQVTVNDRS GASADIDVQVNYSLDPSAAEYLYSEYGKQQTFTQNYISNDLRSVAREQSGRFDTLTMLTN RGEYTKAVQDALAAKWRKIGLTVEQVSVQDVRYGDEIVKKYNEAQAAEIDKQKAMNEQEV AKTEAETKKIKAQGEADANAVLNESLTDNVLKQHYIDALSNADQLVVVPDGADTLVQTK >gi|148337401|gb|DS264458.1| GENE 122 119912 - 120322 322 136 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488102|ref|ZP_02029219.1| ## NR: gi|154488102|ref|ZP_02029219.1| hypothetical protein BIFADO_01673 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01673 [Bifidobacterium adolescentis L2-32] # 1 136 1 136 136 249 100.0 4e-65 MSKSNCEPALLSSLETLQHNLQDAGMLRMKASLYSEAAVREALGDSEYRRISEKLDRRAL LAQLDAVSLFLLQVLGLVSVGEGDGDLLSAEADVMNGAGEFPHLFAFCMIPEPSGATGSD TEIVERFVKRLSLCLH >gi|148337401|gb|DS264458.1| GENE 123 120319 - 120519 194 66 aa, chain - ## HITS:1 COG:no KEGG:BLD_1185 NR:ns ## KEGG: BLD_1185 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 65 1 65 144 75 65.0 7e-13 MKVKDLYWAARNSTFFINLESEGRPLLCEPRLSDEGGVRIRLWLRDPAGTGTGGAIALLS RDEAAK >gi|148337401|gb|DS264458.1| GENE 124 120516 - 120800 217 94 aa, chain - ## HITS:1 COG:no KEGG:BLD_1186 NR:ns ## KEGG: BLD_1186 # Name: not_defined # Def: phage repressor # Organism: B.longum_DJO10A # Pathway: not_defined # 40 94 1 55 55 74 60.0 2e-12 MNANQKRLVTLEGDNPASRISGLIEMRHCLQKDVALAIGMSEQVFSNKMNGLRSFSAKDY KALADFFNTSVDYLMGRTLDPWPVDAPQAEGVAS >gi|148337401|gb|DS264458.1| GENE 125 120928 - 121299 254 123 aa, chain + ## HITS:1 COG:no KEGG:BLD_1187 NR:ns ## KEGG: BLD_1187 # Name: not_defined # Def: Xre family transcriptional regulator # Organism: B.longum_DJO10A # Pathway: not_defined # 11 123 20 126 126 105 52.0 4e-22 MTAPKVAASPQDIAILNLNMLMQLEGRYRKDLAEYIGRRPQNLSRMMSGESNWALNDMWK AAEFVGVSLDVLTDPTLTPAKALSIIGERRNDNDGNGGLPVVNVDDFRLRGGAWKAQAMV LAA >gi|148337401|gb|DS264458.1| GENE 126 121634 - 123892 2527 752 aa, chain + ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 77 751 3 656 675 490 41.0 1e-138 MNEATSSSATPRTKATAKTTAKAAATKTTRTAAKSTAKTTTKKPTTKRTSKPKTATKRTV GETPAPIINRTSPEQFGRVNVLGITPSAENGLYPARVELGEAFKVTAQVFIEGRTKAGAT VSVRNTRGTEKARFPMTCTNPGLDRWEAMVKIGDHSDLKPWEDGYADVKKQLGEWHIVVE GWEDTYASWLHDAQIKVEVGDDVENALESGAQLLERWAGARDSKLTADDKKTLREAAKTV ADKSLDATARLVAATTDAIASLHETNPLRDGLSASNPQRFRVERPKSSFAAWYQFFPRSE GAYFDADGKIVQGTLKTALSGLDRAKAEGFDIVYLPPIFPIGVTNRKGRNNTLIAGPHDP GSPFGIGSELGGHDTVDPLLGTMDDFKAFCAHAHELGLEVALDFALQCSPDHPWVKQHPN WFRTKPDGTIAFAENPPKKYQDIYPIDFNADMEGIEAETERIMDLWIKAGVTIFRVDNPH TKPVRFWQDVIAAVTKKHPETLFLAEAFTRPGMMRALSYAGFTQSHCYFPWRNTKEELEE YLEETNGDGGFYQHNTFWPSTPDIMTAYLRDNGIAGHAVRAVLAAMGSPSWGIYNGYELI ENKQRPGFEEQIDNEKYEVKVRDWDEADKYGISELLTSLNKIRSEHPACRSYHNLHVLPS DDAGVVAFLRQTPAELTGTGKPDTVIVVVNLDGHNAHQSIVHIELPDFGFATDKPLKVRD ELTEREFDWGWDNYVSLAPWADVAHVLTVVED >gi|148337401|gb|DS264458.1| GENE 127 124331 - 124825 815 164 aa, chain + ## HITS:1 COG:MT3730 KEGG:ns NR:ns ## COG: MT3730 COG0221 # Protein_GI_number: 15843240 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 5 159 3 157 162 177 58.0 6e-45 MAETFNVVVEIPRGSKNKYEVDHETGRVFLDRTLFTSMGYPDDYGYIDGTLGEDGDPLDA LVMIPNSVFPGCVVECRAVGLYHMVDEAGGDDKVLCVPADVRFDDIKDVEDVSEYHKAEI KHFFEQYKALEPGKEVLPGDYWTGAAKAEEEIVAARKRLADSEK >gi|148337401|gb|DS264458.1| GENE 128 125140 - 125706 787 188 aa, chain + ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 5 186 6 186 187 130 46.0 1e-30 MLIQILLIGVSVSMDAFAVSIGKGLTVKKLRGVDAFKTALWFGGFQALFPLFGYFAASTF SKYVTAVDHWIIFGLLALIGGNMVREAFEEDEENAKETPEFDWKHMLPLAVACSIDAFAV GVSFAFMTLNIWLSVVIIGITTGLFSAAGLYIGRAFGSRWQKPAQIAGGIVLILIGVKVL FEHLGFLG >gi|148337401|gb|DS264458.1| GENE 129 125774 - 126559 977 261 aa, chain - ## HITS:1 COG:no KEGG:BAD_1446 NR:ns ## KEGG: BAD_1446 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 261 24 260 260 312 73.0 1e-83 MTAPQAVSQQNPSKVVFGKVLAIQIVAYVVLVALALVPGIAYGDSANPAVVPFTIIGSLA MIALLVVFSPFRDGTAGHVIAAIAGLLSAICATTVMLGNVIFPAGLDGGKSFSMEEAWIA GVGGLLIVLIIVSFGRQMARENRTHLIRSLSHSVVEGVAMIASAGWCFLPVLLPTTHSRA AAMSAASGATVDMFSNVTTTWVVAAIVTVLVAVALTVCSYFWHRDAAPEPDARSPWIGLA LLPVMLTGLAVGLAALAIVVL >gi|148337401|gb|DS264458.1| GENE 130 126717 - 127475 997 252 aa, chain + ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 13 228 26 231 268 228 52.0 6e-60 MTDLTLMTFASDPATVLPSLALLSHRVRVLPMDAASLVKMPENTILFLDARDDLATAKTL CRLIHASGLSTPIVLILTEGGFTVVNSQWGIADVVVASASPAEVEGRLRLVSERGNAPAS TAASTGEQGVQNEDGLIRSGDLVVDTNGYTASLHGHPIDLAYKEFELLKYLVQHPGRVFT RAQLLQEVWGYDYYGGTRTVDVHIRRLRAKLGGEYEHLIGTVRNVGYRFDPPEEDEHEAA AKDAAHGESGES >gi|148337401|gb|DS264458.1| GENE 131 127664 - 128329 550 221 aa, chain + ## HITS:1 COG:Rv3674c KEGG:ns NR:ns ## COG: Rv3674c COG0177 # Protein_GI_number: 15610810 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Mycobacterium tuberculosis H37Rv # 20 217 5 197 226 208 53.0 5e-54 MPRESKKARIARMHQEYEQLCVEIPDPKCALNFNSPFELLVATVLSAQTTDKRVNMVTPE LFGEYPGPAELAAANPEHVEDIIRTIGFFRTKARNIIGLSHELCVRFGGEVPADMASLVS LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRSDWASPSPDPVAIEREVTACFP PEEWTDLSHRLILHGRAICHARKPDCADCPLNDTCPSAFAA >gi|148337401|gb|DS264458.1| GENE 132 128419 - 129966 1819 515 aa, chain + ## HITS:1 COG:BMEII0284 KEGG:ns NR:ns ## COG: BMEII0284 COG0747 # Protein_GI_number: 17988629 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Brucella melitensis # 65 502 49 492 506 138 26.0 3e-32 MDENGRKRNLKAEATRWLIFFGVAIVLSVLLWLGLSLTGRKNPITSFGTLVSDSSVTVGI EGNAPKSLDIRTEQGTAVEQALLGNVYETLVSRSETNKLQPGIASSWQASDDGLTYTFTL NDGMTFANGHKLDSSDVVWSLQNAVNNHYVGADQLGDLKEITNPNANTVVITLAKPNPRL LRALAGRAGVVYDAESKTNYAKSAVGSGPFTVSTADQSQIVLQRNDSYWGKKAASSQVTL YYYTNEESMADAMKAGKISMALPLSASTASELGKTNGITADSGISFDKVMLAFNNDNNSP FSDEQIRKMTRYAIDAKTIAKNAPDAYAPLGGPISPLEDGYEDLSGLYLYNLEQGQRMRT YFGVNYIAPIDILVPKEYESIGNDVKTAIENLNINTNLEVLDSAADVTERMNAGTYNIAL TTMSDEGDASVFDNGQSVFHFENGDAQQAYANAMAATNDNDYQARMRDYARAVSENAASD WLYTRKNFLAVSDGLQGYPKNLTDRLLPLNRLTLH >gi|148337401|gb|DS264458.1| GENE 133 130081 - 132810 3887 909 aa, chain + ## HITS:1 COG:RC1053 KEGG:ns NR:ns ## COG: RC1053 COG0525 # Protein_GI_number: 15892976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia conorii # 26 843 14 770 812 572 38.0 1e-162 MTESQDNTINANLTPLPDKVGVDGLEDKWRGVWDESGVYKFQGTRDRKAVYSIDTPPPTV SGHLHVGHVFSYTHTDVIARFKRMNGYDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLKY DPNFVPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLSIDWSQT YHTIGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTAVAQAELESREYPGFYHKVA FRFEDGTPIYIETTRPELLAACGALIAHPDDERYKQYFGQYVYSPLFHVKVPILAHKAAE MDKGAGIAMCCTFGDVTDVEWWRDLNLPLRSIIQRNGRIVMDTPDWIESEEGKRIFQETA GKTTFSARKVIVDELRAAGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDEK LNAELIARGKELNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVKEDGTADY DHPITPSEDRLPIDPTDDVPEGYTEDQRDVPGGFTAEPDIMDTWATSSLTPQIVTRWEEP GEENQAIFNATFPMDLRPQGQDIIRTWLFSTMDRAHLENKCLPWANTTLSGWILDPDHKK MSKSKGNVVVPDKPIKQFGADAVRYWAAAARLGLDATYDEGQMKIGRRLAIKLLNATKFA LAIGREDENHHVGAPAVAAWNPADVTEPIDRSAMSKMAAVVREATDDLNKYEHSKALEVI ENYFWQFCDDYIELVKNRAYGTADSTGNVPSEAAVRSARTTLGLGLDAFARLLAPYLPYA TEEVWSWMHEGEGSVHRAAWPAADVYAAAAGDASADLLAHAGEALAALRGIKSKAKVSMK TPILSVTLAVADDVRGSIEAALGDIAEAGRVTGPIAFTAPAAAEGEDEAADVTVAESELG EPPAKKPKK >gi|148337401|gb|DS264458.1| GENE 134 133290 - 135221 1871 643 aa, chain - ## HITS:1 COG:no KEGG:BAD_1451 NR:ns ## KEGG: BAD_1451 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 643 15 657 657 961 99.0 0 MRHATANRPSGARRPLAAAIAVAVITAAPVAAVGVNDAISALQQNGQYAADASHDDVMSA YTSIDKPGRLFLTNSGSSTSKRVPKGVVALPWKISVSFTLNGPDVSVSDVSGASGMIGIR IALHATKPDVTANLTPIVAFTIPGRVGSDVTADDGVLVSSDNTSTLVAAVGKPGEDLTFN AYVTAKHFTMSSLSIAAVEGNVQQSLPDLTKRATTLVDGLTNVGSQRNRKLIAQLEQLRD NEKALAKQTIAVRSKAHDQAFDGYIDAYVGSYTTHLSGSIGNATQLPAILGTASELNGDT SVAKSVADLANAVNDVSAAYRHIGAADAVDEVIRTIEQRGTSGLVNELTKRAGEEQQRGS KDYSAGQSQLSAAMIPYSMDFTDAYTARLKELGATAGTAGSYETQAIADVRAGIKDNEKL KTASDKVSAAMTALADASEHTGQASAFHQIVLRFADQLDSDDDTSESGAADDASVLDTLR SASASQSLCAKAEKRRSRAQRKAERAQAKNNTADSTSLVDDKNAISMDDVMSYAGGLRPS FGAAADTTSKNVAKVGGVDGSSKNSGGDSSDGSADSSASSLPITGYGLAKTGFTPDNGDL IDETVELAAAAEVFDDALQAGLGGNGSGNSSAGPQYLLSVPVL >gi|148337401|gb|DS264458.1| GENE 135 135331 - 135744 562 137 aa, chain - ## HITS:1 COG:AGc4890A KEGG:ns NR:ns ## COG: AGc4890A COG1605 # Protein_GI_number: 15889952 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 28 128 2 100 105 89 53.0 1e-18 MSDSEHDWLRPEEETESETIIDARTAQNNPEVADVVAKIASLRQSIDNVDAAIVSLLAER FKYTSQVGVLKARAGFAPADYQREHAQIERLHRIADEAGLDPEIAEMYREFVVTEAKRRH KRIAENGGDPGVLDVFA >gi|148337401|gb|DS264458.1| GENE 136 135793 - 136269 475 158 aa, chain - ## HITS:1 COG:MT3390 KEGG:ns NR:ns ## COG: MT3390 COG1522 # Protein_GI_number: 15842882 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 18 157 5 144 150 117 47.0 8e-27 MTNSDNGPVDARTVASQLDATDGVILDMLEKDGRATLSHLSEATGLSVSAVQSRVQKLER RGVIRGYKAVIDDERRGLAVNAYIAVTPIDYSQEAEIPDKLKNIDGIMSCDSVAGSPSFM LTVRVESPSKLEELLNLIHRTVSVSTETTIVLQRYFAK >gi|148337401|gb|DS264458.1| GENE 137 136256 - 136420 67 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTALRRPDKLRRFRDGMCAVVGMVRKKKNMELQWGRSIAAGAVDCWKRGMNDQQ >gi|148337401|gb|DS264458.1| GENE 138 136641 - 138653 2448 670 aa, chain - ## HITS:1 COG:ML1132_2 KEGG:ns NR:ns ## COG: ML1132_2 COG1158 # Protein_GI_number: 15827563 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 288 659 58 430 441 483 69.0 1e-136 MPVEAKERQLPVATSPNLDDMKLPELKELAKQMGLRGVSTMRKTELIATLQAARSGGQAP AGVTVRAPKSAPAADAEVKSAKDKKADEAKQEERPVRAKQAKSAESSEVADAVAAVDALK PNDEAPKRRRHRDAEAGADLLAELGLDDAAPKQDDRRRRRDDDRRDDFEPRRRRRVADGP KSEDVVRDLDDILATLPSQEDADDDKRRDETEDNEYRHSRGRNDRRGRRMRGRDRDYDER DERRGRGDRNDRNDRNDRADRMDRNADRDQRNDRMDRADRDQHRDEPKEDLVPVAGIVDV LDSYAFVRTSGYLPGPNDVYVSMGQVKKYGLRKGDAVHGSIRAPREGERRNQRQKFVPLQ SIDSINGMSVEEAQHRPQFSKLTPLYPQERLKQETTPNKLTGRLIDIVAPIGKGQRGLIV SPPKAGKTITLQNIANAIATNNPEVHLMVVLVDERPEEVTDMERTVQGEVISSTFDRPAS DHTTVAELAIERAKRLVELGQDVVVLLDSMTRLARAYNIAAPASGRILSGGVDAQALYPP KKFFGAARNIENGGSLTIISSALVETGSKMDEVIFEEFKGTGNMELRLSRELADKRLFPA IDVNASGTRREELITDPQELPIIYRLRRLLGGLEPEQAYQTLVPRLKKTATNRDFMASLI QQSGNATNGN >gi|148337401|gb|DS264458.1| GENE 139 138987 - 140576 2224 529 aa, chain - ## HITS:1 COG:CC1101 KEGG:ns NR:ns ## COG: CC1101 COG1232 # Protein_GI_number: 16125353 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Caulobacter vibrioides # 1 527 6 482 504 305 37.0 1e-82 MTQKQSVVIIGGGPAGLTAAWELVKDGGSEQYDVTVLEATREFGGISRTVKHDGNRMDIG GHRFFSKDDRIMDWWKDVLPLQGAPSYDDKKLHREHDMEPGGPDPEIEDKVMLKRHRVSR IYWNRHFLDYPISLSANTLKAMGFKLTMVAGFSYLKSMVHKLPETNLENFYINRFGRKLY SMFFEGYTEKLWGRHPSEISADWGAQRVKGLSIMGVLKNAFQKLLPKKRDNSEVETSLIE EFWYPKLGPGQLWETVESNCEAAGVKVITDANVVEIRQKDGKIASVVYEDSEGNRTEMAA DDFISSMPVKDLVNAVDASDQPAPKDMTEIANGLPYRDFVTVGLLVKHLRLTNTTDIPTL GNPPIVPDCWIYVQDPGYKVGRLQIFNNWSPYLVKDVDNTVWIGLEYFCEEGDSFWNMTD EEATKFAIQELTRMQVINGPQDVLDSHRERVKKAYPAYFDTYDRMPELVDYLDSFGNLYC VGRNGQHRYNNMDHSMATAIEAVKDIKSGETSKDNVWSVNTDKSYHEEK >gi|148337401|gb|DS264458.1| GENE 140 140749 - 141060 538 103 aa, chain - ## HITS:1 COG:no KEGG:HMPREF0424_0108 NR:ns ## KEGG: HMPREF0424_0108 # Name: not_defined # Def: hypothetical protein # Organism: G.vaginalis # Pathway: not_defined # 1 103 1 103 104 164 94.0 1e-39 MSAEDLDNYETDAELSLYKEYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVR LTDAWVWDIYRSSRFVKNVRIVTFKDVNVEEVQKTDIDIPDSM >gi|148337401|gb|DS264458.1| GENE 141 141057 - 142127 1132 356 aa, chain - ## HITS:1 COG:VCA0947 KEGG:ns NR:ns ## COG: VCA0947 COG1670 # Protein_GI_number: 15601700 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Vibrio cholerae # 122 233 63 168 173 65 29.0 1e-10 MSEYAETTAKEQTTDQRARELPERIVIPPIKGEMVHLRRATIDDIARMEVIEAYVGASGI TGKDRVAERGAVNAWVRRSVAWSNGEKSNESGVGDPESRRTIAWSIVTEADHDGDGELDA ASSDNVIGMIFLIDIDGWARSARIQVVLGKDYRGRGYSRDIMPRVMTYGFAPEPAGLGMH RIWVAVPEQNTRSVSVYQSLGFVPSGRSRDALWNASENRYQDLIVMDTLVDEFDPIRSLD AFGMHVIEDNPGVKEALSAREHSIAIQLNSVHKGDADDAAAAGQSGDTAQTSADETSAAP SQESQPNEASGTAKTDQKAGDADNNWPYSSDERKTSKDAWWRTLGRGRKRDTEGRR >gi|148337401|gb|DS264458.1| GENE 142 142130 - 142336 140 68 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRGIVKTHAFLHFVAFYLLLHAFSYDSRVGWGGFTGILPNKTPSWRSVGYNTVGMGAARD RAEKHRKR >gi|148337401|gb|DS264458.1| GENE 143 142397 - 143893 2275 498 aa, chain - ## HITS:1 COG:Cgl1230 KEGG:ns NR:ns ## COG: Cgl1230 COG0064 # Protein_GI_number: 19552480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Corynebacterium glutamicum # 5 497 8 500 501 571 57.0 1e-162 MAEKLMKYADAVKKFDPVIGLETHVELSTTTKLFCPAEVHFGGEPNTQLTPVSLGLPGSL PVVNKTAVDYAIKLGLALHCEIAEWSQFARKNYFYPDMPRDYQISQYDKPTNGNGYLDVE LEDGTIFRVPIERAHIEDDAGKNTHVGGADGRIEGADHSLVDYNRAGVPLIEIVTKPIEG AGDRAPEIAGAYMRAIRDIVRALNISHARMEQGNMRADVNVSLRNSPSDPFGTRSETKNV NSFRGIEKTIQYEIRRQAAILSEGGEILQETRHWDEASQTTAGGRVKSDADDYRYFPDPD LVMLHITKEHIEEMKAQMPEMPRERRNRLKGEWGFNDLEMRDVLNADALDLLEDTVKAGA SASGAKKWWLGELSREANNKGVSLEELPITPADVAEVEKLIADGKLNDKLAKQTVAGVLA GEGTPDEVVKKHGFQVVSDDGALEKAVDEALAASPDIVEKLKSGNMKPMGAIIGAVMRAT RGQADAKAVTKIVMGKIK >gi|148337401|gb|DS264458.1| GENE 144 143919 - 145454 484 511 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 10 489 8 455 468 191 30 3e-47 MSTTELVKLSAAEMAAKIKAKEVSSRELVEAHLAVIESAEPSVKAFLKVSADQALEQADA FDAKSDEDKAQMPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAGM PLLGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSAAAVAAFEAPLALGTDTG GSIRQPGSLTGTVGVKPTYGGVSRFGAIAMASSLDQIGPCSRTVLDSALLQEVIGGHDKR DSTSIPEGPRPMVAAAREGMKRDLKGLKVGLIKELGGEGFQPGVMARFNEGVKKLEEMGA EVIEVSLPHLPYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPAGVPQTAANMMAYTRE AGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIDDFKKAFEKVDVLVGPTSPVTA FKFGEKTEDPMAMYAIDITTIPANLAGVPAMSIPAGLSDDGLPVGFQFLAPQQRDEVMYK PAAALEAALEESWNGPIWQSLKTPWLDGLDK >gi|148337401|gb|DS264458.1| GENE 145 145456 - 145752 448 98 aa, chain - ## HITS:1 COG:ML1703 KEGG:ns NR:ns ## COG: ML1703 COG0721 # Protein_GI_number: 15827909 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Mycobacterium leprae # 1 96 1 96 99 64 39.0 5e-11 MPTFTKEEIVHLGDLARIALTDEEITRLQGDLNVIAESINKVQEVATDDVEPTANPVPLE AYLRPDVPETPLTQAEATAGAPVSETGMFVAPRILGQE >gi|148337401|gb|DS264458.1| GENE 146 145936 - 146799 809 287 aa, chain - ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 22 283 1 200 206 192 43.0 7e-49 MHDPNPIDVAAQASGEPTFREVGVGPWSQTHPGEPRPDDASSPNYDIRFDSTLLDEGDRR NVLDRYRYWTVAAIKADLDSRGRHDFEVAVENWTHDFNIGSMVRTANAFQARRVHIVGPH KWNRKGALMTELYQHVENHPSITELVECWKLRIAGEIAAAQSQAAAIAFHMRGSAAATDG TSGTAPNTSETMAQLEALDAKIAELQAARVIALDIIPGAVPMETYHFPERCLMLFGAEGP GLSEKALELADDVVYISQFGSVRSINAGAAAAVSMHAWIAQHAAPQA >gi|148337401|gb|DS264458.1| GENE 147 146937 - 147608 874 223 aa, chain - ## HITS:1 COG:no KEGG:BAD_1461 NR:ns ## KEGG: BAD_1461 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 223 1 223 223 395 99.0 1e-109 MTEENTFRKTTPVPTHDSAAGQSVSASTESTVDFAMLEPRDQLKALLQAEMKDKPFSELS SVLFDHRGASIVGHILLDTLEEAGYSVDDFDAVGALTAAAVPLVSAMIQAAASRGEDLDG FVMDFVYPSIKGPSIKGKRVVLIDSWLSEKSYVQTSSLVTLRNGNELSLDFSVVENEGAK VLAVASLIGGVDMVDPTIKVINPVTSEESELPFVEVFKESELH >gi|148337401|gb|DS264458.1| GENE 148 147678 - 149012 1574 444 aa, chain - ## HITS:1 COG:CT825 KEGG:ns NR:ns ## COG: CT825 COG1322 # Protein_GI_number: 15605560 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydia trachomatis # 81 417 60 381 427 194 33.0 3e-49 MFDNPVFVVILLVIVAALGAAAGFFAGRAKGQDMARGAKESDLNEAKAQIEADKQDISDL NAAVVQYRTQAEGFSQQLTYLKSQLAQAQRAEEMRVERERQRAAEEANRRQAESERKLQE QSKVLSALAPVQKNLDALQTKVAQIEEGRRHEMGALGEQLKGLGEQQARLDRETSALSSA LRNNKVRGAWGEAQLRNIVESAGLLEHVDFDTQVVVTDADGHTQRPDMIIHMPGGKTIPI DAKAPYADYQRACEIPDTASPEELARKNELLHSHAKAVRDHVKTLGDKAYWNAFSDAPDF VIAFIPNESLLQAALETDPTLMDDAFAQKVALTSPITLWAVLKSVAYAWQQQSLTDDAKM LFDLSRELYERFAVLGERATKLGSAITKTVGAYNSFAASLESRVLVTARKLQRVDQSKVI GTVDMIAPEKGDIRELSAPETNAE >gi|148337401|gb|DS264458.1| GENE 149 149156 - 150091 680 311 aa, chain + ## HITS:1 COG:alr7635 KEGG:ns NR:ns ## COG: alr7635 COG2217 # Protein_GI_number: 17158771 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 105 235 124 254 753 61 30.0 2e-09 MGFDLFLAAVSIVAASIATWALLRLFPSSDARQAIPLRTDGGFADPSHTTDGGVTIDGKV TADGESASDIDGQPTDHLGKRLVIALILTIPTFVITLLALAKIAMPGWLTNPWLHAIVIT PVMFYCAAPIHHRGLPALQRRRPNGDSLVSLGMAIVYAYSLLLCVVSWIFPAGSRDPYFA FVGVVATLSLAGTLVRQHAMTAQQTAETEKAQSAQSTESTESARSQAKSPEPTQEKSAEE LLFRAVVGHAIRARVLQITTSVTIVVAVWTCALWLAFGVQPKLAIAILLGSTVLSVAGLV LQAYDRQVTNR >gi|148337401|gb|DS264458.1| GENE 150 150095 - 152812 1741 905 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 4 876 5 808 815 675 43 0.0 MEQKFTQMAQEALSDAVQNAAALGNPQVDTLHLLDAMLRQENSMARALIEAAGGNAQNVS AEVHQAMQSLPSASGSTTTQPDVSRQLSAVLSQAEKEMQRRGDEYVTVDLMLVAIAAAKP NQSADILEKNGLTADKLRNALTAARGSDRKVTSADAEGSYKALEKYSTDLTAAAKEGKLD PVIGRDQEIRRVIQILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTTLQNKKLI SLDLGSMVAGSKYRGEFEERLKSVLEEIKKADGQIITFIDEIHTIVGAGAAEGSMDAGNM LKPMLARGELRLIGATTLDEYRENIEKDPALERRFQQVFVGEPSVEDTVAILRGIAPKYE AHHKVTIGDDALVAAATLSNRYISGRQLPDKAIDLVDEAAAHLRMELDSSPEEIDELRRQ VDRLKMEKSYLLGNPKNDKAAEKAEAELDDSAKDRLADLNQEIADKSEKLNGLKARWDAE KNGHNRIGDLRKKLDELRTQAEKYEREGDLAKSSAINYGEIPAIQKEIAQAEKNEAESGG ADNANADVPMVPDRVDADSIAEIVSDWTGIPVGRLMQGENEKLLHMEEYLGKRVIGQKEA IQAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSE YMEKASVSRLIGAAPGYIGYEEGGQLTEAVRRRPYSVVLFDEVEKANPEVFDVLLQVLDD GRLTDGQGRTVDFKNTILIMTSNLGSQFLVNPDMDADAKKKAVMDAVHMQFKPEFINRLD ELVMFHPLTREELGGIVDIQVAQVSARLTDRRITLDVTDSAREWLANTGYDPAYGARPLR RLVQTEVGDQLARMLLAGEVHDGDTVLVDQTGGDHLELSAWAADQLEDMGEEKTDDSADV PNPAE >gi|148337401|gb|DS264458.1| GENE 151 153115 - 153936 841 273 aa, chain - ## HITS:1 COG:MA0585 KEGG:ns NR:ns ## COG: MA0585 COG0179 # Protein_GI_number: 20089474 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Methanosarcina acetivorans str.C2A # 55 271 37 244 244 174 45.0 2e-43 MRIARFTHNDVPQYAFVQTDKNDGKDYLVALNGYPLSGQAVEPTGERYPVDGDGIRLLAP VIPSKVYGLAKNYEAHAQFMHEAGHSDIKHAPEDMVIFTKPSTSVIGPDDPIVIPLCSND MNFEPELAVVMGRIAKNVPVEQAMDYVLGFTCVNDVTLRDLQGLDPTWTRAKGFDTACPL GPWIVTRDDVDWKDAKISFTLNGEDVPMASGTTANLIHGIPEQIAAITSFTTLLPGDVIM TGTPNASGHLDPGDEAIVHVEGIGDLRNVVVRG >gi|148337401|gb|DS264458.1| GENE 152 154031 - 154582 366 183 aa, chain - ## HITS:1 COG:no KEGG:BAD_1466 NR:ns ## KEGG: BAD_1466 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 183 24 206 206 330 98.0 2e-89 MCNGGGAFSPEEVEYLRSLPVVAEATSRRITYTESFKHNCMRRYHAGESPVELFREAGLD PSLIGYKRIERCFARWRKIACRMGTDRLVSVDGNGGVVPSASADVAPSAESAEVARSAVS QPVQPTQPAETQNNATLPAPRNAAEVPILSGGDVRDLLIAQQVRRIDELEREVAALRAEL HRK >gi|148337401|gb|DS264458.1| GENE 153 154905 - 156488 1812 527 aa, chain - ## HITS:1 COG:no KEGG:BAD_1467 NR:ns ## KEGG: BAD_1467 # Name: not_defined # Def: cell surface protein fimafimbrial subunit # Organism: B.adolescentis # Pathway: not_defined # 1 527 1 532 532 833 93.0 0 MKTRRLCAVIAAAATLLGGMALGTAGAYAAGSASIEVRHSQKGHTYSAYKFASLTVDGDA VQVDTDADWVTAVTDAVAAANNNMDPVVSMPSEYDSNPAAFAATKTGDNDAAWFRTFAAS LAVGDGVVADKTVAGNGGTAAIGSLEEGWYLITDVDKDGGRGTNAIVATTLNGVAATFKV KGDPATGQGKINAVGMFVAKNENEPDQPGKTADTITTTEGVSIGQTVAYTITLDIPNAAE GYDKYPYFVKDVASKGLTVNRDFKAVVRAADGTETNMPFAYVTVPTVGADGKTTTVLEFD LANKSGQLVITYTAVVNKDIIDMGNKVTNKAVVSRDTEVWNTPVEFDSYTGGFSFHKYGV GSDANGLAGAKFHVFEGTEVSQTPLKFIKIVDGEYRLAEANEKNTTENVVSTTGNVRIMG LKSGKYTLKETGFADGYAKNFVPTFTVELTVNQENGESTFKLVGANNFGLASEVDKVIWV KNVKNVTQLPLTGAMGTVLFTIAALVMAGAGLALVLRFRESDTPMAV >gi|148337401|gb|DS264458.1| GENE 154 156651 - 159104 1893 817 aa, chain - ## HITS:1 COG:no KEGG:BAD_1468 NR:ns ## KEGG: BAD_1468 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 417 817 1 401 401 736 97.0 0 MGKFTALLVTIAMLAGTTGAGATAFADETVTDGGNVAAESAASQPESTQQSDAENAVGSD VADIAGQDVAGQSATDDDDAQCLTDDGESQQPSNEQAQSQLQSQSQPEQPSETMPEQRQP CDKTEQPNEQKEQERQAVRQPTAENADVPANGAAPAQDGDRNDHAGENRTDAVANGDAGA TADDGKTGDADDADNDGNTAEDADDAEHIMRDRFTFNRKTVMRAARNVAVPQPDHTKSIT YNNGGKYTLNLNVVGKDTRESHETTEKIEVVLVLDTSGSMNYCMDGSQRGCNKSNPKRLT ALKEAATSFIDATETTNDTIQDENSKVRIAIAQFGQTSGVVSSLTSDTAALKSSVSRLSA NGATPADKGMAAAQTALLRARPGAKKVVIFFADGVPTTQNTFSTRVANDAVTTALAMKSA GTLIYSIGIFEGANPEQQSFGNRENDQANQFMHAVSSNYPNATAYNKTNWGTGSNLGYYK ATNSADDLTKIFDDIQKEITTGSAYSGVSIVDELSEYAQVDGVVWNMASMRNFGGATYYR VTGGVTLNVTNLSSGATPPVLERDYTLWYSDAGNGKIRVEFAGDYQLLHNATYTLSYGIV PTDSAYARVNMVDGGINYDATGDAGTGTTSAGKPGFRSNASAQVCYTFDKQSACAAYQHP VLQVPSANVVVTKHWEGGMPASGATLRIDFMQGGASKLGKDLSEDDELPTGEWQYTFRGV MAGDYTVTEGNIAGYHAKGNVTSVPISITRADMWSAFDKGQTATYEASFTNVKETVAVLP LSGASEGRTWLAVAGVTALVLLLAGIVGLALIGRGRP >gi|148337401|gb|DS264458.1| GENE 155 159303 - 160592 614 429 aa, chain - ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 164 369 22 200 251 168 45.0 2e-41 MFWSASRLMSKPVRLLARRTDSYVHAHAVLRSPMRLFGAVAGASADSYDAGDDNDGIGNG AGVGSDAGAAADSGHAGTVAFAGTSAGTFAGTPSFYEAIDIADVVRARRLRRIRFILVRC VSVLLIVGAVVVASLPFAMQAHSARRLAETSDSAARTVAGWPYPMAMEELERARAYNRRL AVEGQPVLGEAADPFTTRPAGTAGDADTADDSAPSGGSGLSAADTDANYQGLLDSGAGIM GTVLVPKIGVELPIRHGTSEPVLAVGAGHLYGTSLPVGGTDSHTVVTGHRGLVKSLMFTR LDELHDGDFMYIKVMDETLGYEVDRISVIEPDDVSRLKIVPGEDRLTLMTCTPYGINTHR LLVSGHRVAIPLPAPDPADVRDERATELGALAMTIVCTMGGMLLCCMVVRSMRPRHRIMR HASAWPRKG >gi|148337401|gb|DS264458.1| GENE 156 160561 - 160632 75 23 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGVNMGVFEGETHVLVCLSIDE >gi|148337401|gb|DS264458.1| GENE 157 160867 - 161685 814 272 aa, chain - ## HITS:1 COG:VC0461 KEGG:ns NR:ns ## COG: VC0461 COG0325 # Protein_GI_number: 15640488 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Vibrio cholerae # 21 271 2 232 236 135 37.0 9e-32 MTAYMDHKNLANEVIDDARAREITDGVHRVLDRIAAAEEQAGREAGSVRLLAATKTRDIG EIMVAIDAGVRMIGENRPQEVTAKAKGLARRCAERGFSLGVAGVAPDAAAEHIPFHLIGQ LQSNKIGKVLPVVDTIESVDSIDLAEKISRRAVARGITVGVLLEVNESGEESKSGCDPAH AIRIAQKIGTLDGIELQGLMTIGAHVHDETVIRRGFSHLRKTRDLILASGEPGTDRCREL SMGMTGDMELAIAEGSTIVRVGTAIFGERAFI >gi|148337401|gb|DS264458.1| GENE 158 161974 - 162393 443 139 aa, chain - ## HITS:1 COG:no KEGG:BAD_1472 NR:ns ## KEGG: BAD_1472 # Name: not_defined # Def: transposase # Organism: B.adolescentis # Pathway: not_defined # 1 139 1 139 139 259 99.0 2e-68 MTKRQFSRAEIEYLRTLPSIDAVTDSRITYAREFQIDCMRRYLQGEKPTAIFISAGLSPS VIGHKRIERNIARWKRDEDIMRKAAEEPEPHDTAVDNHNAMSEVPLGKIQSLVCQVMVLS DRVDKLERLVEGLRKGDKI >gi|148337401|gb|DS264458.1| GENE 159 162765 - 163922 886 385 aa, chain + ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 3 310 4 238 295 155 33.0 1e-37 MPGRFAPTPSGRMHIGNIYAMLGAWLSARSRGDGMLLRIEDIDEPRVVPGAAELMMDDLH WLGLDWDGDPVFQSARHDLYREALHCLENLTIDDAYDSPFDERNDHTPAVGSAPNGAIAG TTPLIYPCFCSRADIRAASAPQEGDRFMVYPGTCRRLIASDPDTVRRRLANGDRHSLRIA MPADTNPRATVQFDDAVFGHQEFNLARDVGDTIVRRADGLFSYQLVVVVDDLDMGVDDIV RGRDLLRSNALQIAIRRALIKAGFRKAKTQASAPSQHAPQSQYTPYNPENPRYAHLPLID NAAGRRLAKRERSLDMGALRAHGVTAEQVVGYCAWLLGLQGDSAHTSPQPMSAVEALQEF DWGKVRTDTADRSISQDDFDAYFDL >gi|148337401|gb|DS264458.1| GENE 160 164018 - 164920 657 300 aa, chain - ## HITS:1 COG:no KEGG:BAD_1474 NR:ns ## KEGG: BAD_1474 # Name: not_defined # Def: membrane protein # Organism: B.adolescentis # Pathway: not_defined # 19 300 1 282 282 504 99.0 1e-141 MKRIRRIIRALDPKADATMGQRERLEAFRIRRAAVLVLVLFLLIASMTSCSVHALLVRMT PNTQMTAQATHSTSAKKPAKKTAKTNQHKTAKKTKPETKQSQEEQAVAKAVSAQSAALSD DEKTAILNKAQETAQNSGKPVTQYHYCIATKGNVGSADEFGNAAFRILNDEHGWPRAGAI FDQSTDGNCDFNLVLSQASEMTSFSPSCSVEYSCRVDNNVIVNDDRWNGGTQQWLAAGGN LARYRTMVINHEVGHRLGHIDNETTCAGEGQLAPLMQEQSMHLDGCKVNEYPLDSELWIG >gi|148337401|gb|DS264458.1| GENE 161 165096 - 165827 1046 243 aa, chain - ## HITS:1 COG:CAC0770 KEGG:ns NR:ns ## COG: CAC0770 COG0580 # Protein_GI_number: 15894057 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Clostridium acetobutylicum # 1 242 1 242 242 275 57.0 7e-74 MEYTLFTKLAAEFVGTAVLMVFGNGAVANAELKNTKGYHAGWLNIAMGYGFGVMFPVLMF GGVSGAHINPAMTLAQAVNGMFPWNEVLPYIIAQLLGAVAGQLIVYVTYLPHYKDTDDAE AILGTFCTTDAHNDRVNYFLNEFFGTFMLVLGALCCLSLPWGKANPAAASIVVGFIVWGL VTSMGGPTGPGLNPARDLMPRLLHAILPIPNKGDSRWGEAWIPVVAPIAGAIVGAFLFKV LFA >gi|148337401|gb|DS264458.1| GENE 162 166489 - 169569 3432 1026 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0266 NR:ns ## KEGG: BBPR_0266 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 147 1025 5 880 880 609 44.0 1e-172 MACPNCGQPTIEGAKFCASCGSPLTQTTAAAPQAPAAPESDDGTMLSSAPHMAPAPQMPT AAVPLPNSAAPAAPQTTVPQPTTPQPAAQAQPTAQAQATQTVAPQAAPTQQFQYAPSPAP QPAAAPQPSQPTQQIARPAADPTITALTTPQSMKTMGASLGIGLGASVVFALLASIVFFM GNAAASNGLAGIPGFSDTASFLGNNGVSGSGPNFFQILFTVMTLGVGGSLNLKTSSQGFS LSNLGIDASHVSVTLPVGLPGVALAIGAAFGAYMLARRFALRFKWTGVISSLIVGVLSGL VLLVFAAIFPVTVGGSYSDYSASASLSGVSFRTFCMAFLLSAAGALAGYALAQYAGDSGN VFSAAWRWAHRARGFVRTLVESFAIYGVLFLVLGLVATIAMSAANHLGAGGLLLVPLLFP ALPIMLISLSSFGGIAFSTSSYSVHTITLFNVSSLSQYGWILWICFVLFLLATFYIALRE TARNMYDPYYAGWQHTWKAPVAAMVFWLAAEFLFTYFAAGYASSSMSMTTPMWYFLVAGI WAFLIEVAAMTFGPTLVASLPGMWRIIVGGTVQQTPQNVVDYVKSCDPSYGMKKTSATAS GTTATATMPTASAAAQPANPTTPAAPAASVPQPATPAAPMPAPTAPTATPVSQAVPQPVA PTSMPNTTTGNTATGAVPLPQSPAGAASMPVAAPGAGQPLDPKTKKTILISGIVIGALIV LGIVYGVLNSTVFSAKSVAQSYLTAIADGKYDKANDIADPQVDKDQLKLLSDTVAKADNA TIANPHIDSVKTVEGVAKVNVTYSLNGKNVNDSLTINKDGSKFLLFPNWKISSPLLKTIT VSVPNAVESLSVNGVDVTAKNAEKSDSGAWTLRVYPGSYKVSIGKSGYVTSGITMVRTNA DSDAADLKIMPTAKLKEDLSKAVNAKLDECAKSTDYAPEGCPFGFDLYDEDYYRNFAWSI SVYPKLSDIDLDYGTFSTRQGKAKCTYEEKNFDDSWESQDDSTHFTVNGSFSIRDGKLSV TIDDED >gi|148337401|gb|DS264458.1| GENE 163 169710 - 170156 725 148 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026498|ref|YP_910343.1| 50S ribosomal protein L9 [Bifidobacterium adolescentis ATCC 15703] # 1 148 1 148 148 283 100 3e-75 MAETKVILTKSVNHLGHPGDVVAVKSGYARNYLFPQGLAFAWSKGAAAQIEAMKRARLAK AVATREEAVAAKEIIEGSTVEIAAKVSESGKLFGGISAEKIAIALSSKVEVNPKNITVEP IKTTGDFPATVALHPEITANFFVKVVAE >gi|148337401|gb|DS264458.1| GENE 164 170176 - 170424 410 82 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026499|ref|YP_910344.1| 30S ribosomal protein S18 [Bifidobacterium adolescentis ATCC 15703] # 1 82 1 82 82 162 100 1e-38 MSRKRPQPPVKPFKKKPNPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQR EISKAIKNAREMALLPYATSGR >gi|148337401|gb|DS264458.1| GENE 165 170511 - 171170 764 219 aa, chain - ## HITS:1 COG:ML2684 KEGG:ns NR:ns ## COG: ML2684 COG0629 # Protein_GI_number: 15828449 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium leprae # 1 119 1 119 168 147 62.0 1e-35 MAGETVITVVGNLTADPEIRTIGSGAAVASFTIASTPRTWNRNSNQFEDGQALFLRCSAW RDMAEHCAQSLSKGMRVIAQGRLQQRSYQAQDGSQRTVIEMQVDEIGPSLRYATAQVTRQ SSSGNGGFSGNRGGYNNANNNGGFGGNNGGYQGGSSYAGGAGYQGGASAPVNAAPAQSAP ASDPWSSSDNSGSSFGSFGASQSFGGSSEFGGDSDEPEF >gi|148337401|gb|DS264458.1| GENE 166 171213 - 171503 482 96 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026501|ref|YP_910346.1| 30S ribosomal protein S6 [Bifidobacterium adolescentis ATCC 15703] # 1 96 1 96 96 190 98 5e-47 MMSAHKYELMFIADPELDERGLKKLTEQYLETVTKEGGAVENIDIWGRRKLAYEIAGKTE GNYVVVNYSAEPATSDELDRLLNLNESVIRTKILRK >gi|148337401|gb|DS264458.1| GENE 167 171781 - 172794 1372 337 aa, chain - ## HITS:1 COG:MT1045 KEGG:ns NR:ns ## COG: MT1045 COG0462 # Protein_GI_number: 15840445 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 11 325 10 324 326 387 57.0 1e-107 MSAILEGTPDKKLALVTGRAYPEQAQETAKYLGTDVLETTAYDFANGEMYVRYTEPVRGA DAFVMQAHTEPINKWIMEQLIMVDAMKRASARSITVVAPFLGYSRQDKKHQGREPITARL MFDLFRSAGADRIMTVDLHAAQEQGFFDGPVDHLTAMPILLDYVRNSMPLENTTIVSPDA GRIKVSEQWAAKLGGLPLAFIHKTRDTTRPNHAEAHGIIGDVKGRDCVVVDDMIDTAGTI CEAVRTLNNAGAKSVTLVATHGLLSGPAVERLRDCGAREIVLTDTVPVPEEKRLPNMTVL SVAPLLAAGIRSVFESGSVSTLLNGLPEDMRPRNIYA >gi|148337401|gb|DS264458.1| GENE 168 173021 - 174013 1433 330 aa, chain - ## HITS:1 COG:PA1950 KEGG:ns NR:ns ## COG: PA1950 COG0524 # Protein_GI_number: 15597146 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Pseudomonas aeruginosa # 13 326 1 304 308 154 36.0 2e-37 MSATEVLSALDRIHGTVSVIGSMNADYTVTAQRLPGPGETITGGPLQLLPGGKSGNQAAA AARIGATVQMFGAVGSDNNADFLLGALGEAGVNTTHVRRVLGPSGTTVITVDAHGENTIV YSPGSNAQVTVDYVESVRDALTHSTVLGLCLESPIETVTAAARMCHEAGVKVLLNDSPFT PSLPVELVEASDILLVNEHEMAQLLGIDEPENDDWDSFDWWHALDELRGFGFEQAIVTLG GDGSVVLDGTADDPEHRVQRIAPVRVKAVDTTGCGDSFMGTVLAGLASGLALSEAAELAS YVSAYAATGYGAQASYGNAAQIREAFASAE >gi|148337401|gb|DS264458.1| GENE 169 174125 - 175594 2140 489 aa, chain - ## HITS:1 COG:SA0132 KEGG:ns NR:ns ## COG: SA0132 COG0477 # Protein_GI_number: 15925841 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Staphylococcus aureus N315 # 35 473 10 444 450 134 27.0 5e-31 MSTSNAAATAVNTAPSQAPVDPFDDPVTSNKMAVRALIPLLITFVLGTLCLQGFNLVFQQ VGADVGAPAQASLITAFPSIVLGIVCFIYGSLGDFVSLKKLVTFGLVTLFIGSIFGFVAN YFFAANLWTVIIARVLQTAGEQVAGSAFLVVATKYLRNDLKVIFFGLFTAAYQLSASIGV FAAGMLSSIAWQFLFLIPSVTILFLPILLKTLPSKSGNGQKVDAFGFVIFGFATAFLTLF FSYMSWWMLVVSLLLFVAFAFYINKASNPFITPAFFKNTRWLRAICLILVFYFVNYALSP IFNAIGTNIYGMTTTQVSLHIVWAFVVAAVVGTCSGMIIRKIGIKAGIVTAGTLMFLGWT GAAFCVNSGFVVLTLCACVFYAGCGLMYSPVVSTVLGTIEKDESGRGVGMNDLAMNVSPS IGIAIIGSLLGSNALAGSSVTGATGDAANYSNLLLIAAGTALLGLIVFFVFKKKIYEGNH ALETEESAK >gi|148337401|gb|DS264458.1| GENE 170 175721 - 176677 1401 318 aa, chain - ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 2 316 3 315 316 409 68.0 1e-114 MKKMILDLDTGVDDALAISYALGSPEIELIGITGTYGNVLVEQGVRNALAVTDLLGHPEV KVYQGLPHSSTTDHFEVLPISAFIHGDNGIGDVEIPDSNRSVETESAVDFIIDAVKTYGK DLVYVPTGPMTNIEAALKKAPEIKDEIGQIVLMGGALTVPGNCNACMEANISQDPEAADY LFRSGAPTTMIGLDVTLQTLLTYKETQQWRDLGTKAGKFLADMTDFYIKAYETTSPHLGG CGLHDPLAVGVAVDPTLVTTLDINMKVDVDGPTRGRTIGDETRLNDPVKTMKVAVGVDVP RFLNEFMTRISGLAAKAQ >gi|148337401|gb|DS264458.1| GENE 171 176676 - 176870 165 64 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488168|ref|ZP_02029285.1| ## NR: gi|154488168|ref|ZP_02029285.1| hypothetical protein BIFADO_01740 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01740 [Bifidobacterium adolescentis L2-32] # 31 64 1 34 34 69 100.0 7e-11 MCVPFLFDGPDDGPPPYGCVVSYVSNTFSFMLCVDKIYDKAFYQERKFGTTIRRVAFISS NLTV >gi|148337401|gb|DS264458.1| GENE 172 176953 - 178011 921 352 aa, chain - ## HITS:1 COG:PM0547 KEGG:ns NR:ns ## COG: PM0547 COG1609 # Protein_GI_number: 15602412 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pasteurella multocida # 5 316 2 309 334 192 36.0 1e-48 MAYRATLKDVAAAAGVSVTTVSLVLNNRPARVSEEKRKAIADAAKKLNYVPNQSARSLVT KQSQLVALIVPDIENLFFAALAKCVEDECAAQGYSLIVANSDDSRVTEHELLQRLPARGV DGVMLIPARESCAGDAAERLREDVALVSCPVVLIDRLTQCGWCDAVGFDNYLGGRLAARY LLEGGHTRIGIVTGDTAESSAAERRRGFVDAVEQAGECFDSSLCVEGDYRFGSGYHAADQ IIDGGATAVFCCNDVMALGFRQRMAERGLRVTEDMQVIGYDNILKRFGLGWRMTTVEQSV ADLAAACWGMLRERIDVAVRAKSGTESGDARPWLSNPQVEVLTPKLVQAACA >gi|148337401|gb|DS264458.1| GENE 173 178213 - 178686 641 157 aa, chain + ## HITS:1 COG:no KEGG:BDP_2028 NR:ns ## KEGG: BDP_2028 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 5 157 3 155 155 135 66.0 4e-31 MQPTMQKNNVKQRKTIAIIAMIAVAAIALAAVAIIAVSNKREMTQAASDTCALNAKALAT HQESFEEAQQEAEEAAKLTVNDVADGTTLETLKDAITLAKAVESAPACPASGNASDFTKA TDDIRKYADNLRNITNELDAAAKSVVASQELRLESAE >gi|148337401|gb|DS264458.1| GENE 174 179303 - 180325 853 340 aa, chain - ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 9 335 3 338 346 464 64.0 1e-130 MSEQGFKPKHILVTGGCGFIGANFVRYVARNHPDVHITVLDKLTYAGNPANIDGLPQSQV ELVIGDICDASLLERIVPGCDAIVHFAAESHNDNSIFDPEPFIRTNVEGTMRLLEAARKY DVRFHHISTDEVYGDLALDDPARFGENSPYRPSSPYSASKAASDHLVRAWTRTYGLRATI SNCSNNYGPYQHVEKFIPRQITSIMEGVRPKLYGTGENVRDWIHTEDHSSAVWEILTRGR IGETYLIGADGEMSNIAVMRMILRLMGCAEDAFDWVRDRPGHDRRYAIDSSKLRTELGWK PVRTDFEAGLQATIAWYVANRAWWEPAKAATEARYRAQGQ >gi|148337401|gb|DS264458.1| GENE 175 180322 - 181197 158 291 aa, chain - ## HITS:1 COG:no KEGG:BAD_1496 NR:ns ## KEGG: BAD_1496 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 250 151 400 400 417 94.0 1e-115 MYCAVMTLPKWRIPVGLLLCVPQMLRLASFSISADSLTQAVMILFSCLLFRGIIGKRSQR GAVALAVTSVLLAMCKFVYMPLVLLVIPLMFDRVSGRWRVNRGRAVPLLIGVVASGIWTI FWLGVNAWYTNCPMLVSYKQMSERKHALLTDPVAMLDAVKNIAWAITHAQSNMNNRTDSI MIAACWLAIVVSVVVLAVASVVNACVKSRRKNPVRTANGSINACGVLSLPYAWLIAVVCI GDIVLIYLALWLQYDADGLIGVDGMQFRYFLPYAPLFAFVMLESGRRLLKQ >gi|148337401|gb|DS264458.1| GENE 176 181810 - 184443 874 877 aa, chain + ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 267 867 263 813 824 285 32.0 4e-76 MLINPRLHKGLFAVKEATMPYIQSAVHAFEPSYTKHPKQSFTGGIYQPLADESMTDTPSY FKARHRAELYTQKTLLHAEPAHRSIYIPATEVSPAPCDTDILAITDEQHTSSFAAEEQVN GNHALQAMPSTLQTVRTALTTAEHSLKRTGYAIASATRTTACAARTAATTVRNAWRTFTS FKAVQLIIKFFRGAHALWKKRHRFSFSFYAIILITLTTFETLFIQWGMYSEPEYKKGEDI SEAVKQASSIVGQLAHFISQIWFDKNYIFLLNLIILAVAYLTLIFIINRFWIATAIFSTV MTVYAVANHIKIESRNEPVLPADLNFITGGNTGQLASFIPQSSQGLVNTAVSGVIWLVVI CIIMQFIDGRNAVIYCSWRHPFTGIKNLAGTLTRIVAACCSFALCFSFVWGFGNEGYWST DFAKNLGDSPQIWNGLADSTNNGPVVNFLRLAHTKTMDKPNGYSQEAMEKISRKYTEQAK QLNQTRTENMTDNTVIMVLSETFSDPTRVPGVSFSEDPMPNIRHVKAQTTSGLMLSPGYG GGTANIEYQALSGLSMANYSSTLSIAYQQLVPSLKWAPTLNQAWDKANGKGSSIAFHAYN RNMYFRDLNYKKFGFSKFYATDGTPQLKGLRPLGSAWYASDESFYSEVLKKISSSDQKKF YQVVTMQNHMPYEDFYPDNQFKDEDTSSNLQDDEKQNIETYTKGLSYTDQATTEFLNQLN HIDRPITVVFYGDHLPGIYSTAYSSKDNILGLHETDYFIWSNDASKSAGTKLDDVSSAYT SSNYFSAQLASHLNAKVSPYLAFLTKMHETIPAISIPSSAGGNTDEPVYLDAAGNRINNK QLSKEAKTMLHDYQLIQYDMSVGKNYLKDTGFVDLPQ >gi|148337401|gb|DS264458.1| GENE 177 184495 - 185739 1050 414 aa, chain + ## HITS:1 COG:STM2080 KEGG:ns NR:ns ## COG: STM2080 COG1004 # Protein_GI_number: 16765410 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted UDP-glucose 6-dehydrogenase # Organism: Salmonella typhimurium LT2 # 1 414 1 388 388 458 58.0 1e-129 MKIAVAGTGYVGLSIALLLSQHNEVHALDIVPKKVELLNNGKSPIVDPVITDFLKKNASG ERPLNFHATVNAQEAYADVDFAIIATPTNYDEKKNYFDTSSVEDAITAVRQYSPHAWIII KSTIPVGYTQQLRENLDDNHILFSPEFLREGHALYDNLHPSRIVVGAPQNNAESVQTARQ FATLLAEGADPSENNRTNSDGSTGIPTLVVGTTEAEAIKLFANTYLALRVAYFNELDTYA ESRGLNTREIIDGVCLDPRIGDGYNNPSFGYGGYCLPKDTKQLLANYNQVPQNLIEAIVD ANRTRKEFVASEVMERIKGVQNPVIGIYRLTMKSGSDNFRQSAIQDVMRQFKANGLPVLI YEPTLDKPDFQGSEVTQNLSEFKERSSVIVANRWNNDLNSVAFKVYTRDLFRRD >gi|148337401|gb|DS264458.1| GENE 178 185809 - 187695 1530 628 aa, chain - ## HITS:1 COG:PM1139 KEGG:ns NR:ns ## COG: PM1139 COG1442 # Protein_GI_number: 15603004 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Pasteurella multocida # 291 549 3 251 302 91 30.0 5e-18 MVLTAEQHHPNIKIFVSAHKQATFPEGNSIVPVQVGAANAVTRFTDTLHDDEGENISTKN PRYCELTAQYWAWKNEDADYYGFCHYRRYFDFTDTPHKENDYGEIIDSYIDNHALAEYGI NDDAIARAVEGWDVITTPLNDVRRIGGFSNLKQHWDADEHLRLKDLRHMYDILCARHPDY KVDADAVLNGRTAAFCNMFIMKKDIFFEYNEWLFPLLDEFAAATDFSRMDVQTTRTVGHL SERLLNIFIAHKQRTGAHWKVKRLQCVHFLHPEPAAVLKPLDAGYKNVVPVVFAADNNYV PMLTTTIYSMLKNASKDRSYDVIVLERNISDENKQNIRQFFERFPNAVIRFFDVSRYLAG FNLTTSNAHISIETYYRFIIQEALPFYSKLLYLDCDLVVNGDVAELFDIELGDNAIAAVP DIDFIGNLNMKNGERAGYVRKQLHMRDAYGYFQAGVLVMNLDRMRKIHTVHEWLEIASEP GYIYNDQDILNVECEGLVTYLDYSWNVMHNCAGRVNGVFDFAPANVYKAYMASRKAPKIV HYAGFDKPWKNPWCDFASLYWNYAQETPFVAQMIAAMSGVERPVPPEHHERAIAEDSPIR KYVDVLAPTGSKQRELMKVVARKVQGKR >gi|148337401|gb|DS264458.1| GENE 179 187822 - 188655 1134 277 aa, chain + ## HITS:1 COG:SPy0789 KEGG:ns NR:ns ## COG: SPy0789 COG1682 # Protein_GI_number: 15674832 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 22 277 1 253 253 215 49.0 6e-56 MKDFFESLKKRYHYAMVVFKELVKTDFQLRYQGSFLGMVWSVLKPLMLFAVMYVVFVKFL KFSDGTPTFPISLLCGTCLWSFFSESTSMGMRAIVDRGDLLRKIHFPNYIIVASTTMGSM ISLGINLVVVILFGFFAHAHYTWRILLVPLSIIQLYCLGLGVALLLGSLYVYFRDVAHIW EVVLQAMFYATPIIYPISMVAQNKEFSWAADILMLNPTTQTIMDIRHNLLSPEYVPTVWT MVDNKLLCLLPYVLSAVILWLGIHVFRKYSAKFAEVL >gi|148337401|gb|DS264458.1| GENE 180 188659 - 189903 1268 414 aa, chain + ## HITS:1 COG:SPy0790 KEGG:ns NR:ns ## COG: SPy0790 COG1134 # Protein_GI_number: 15674833 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 15 363 4 352 401 375 55.0 1e-104 MTEVSMTENNTVDERPVVLKVEHVAKSFRLPTEQATGLKMAFLNWTKGIKGYTEQHVLRD INFEVHQGDFFGIVGRNGSGKSTLLKIISQIYVPEQGSVMVKGKLVPFIELGVGFNPELT GRENVYLNGALLGFTHEEIDAMYDDIVEFAELEDFMDQKLKNYSSGMQVRLAFSVAIKAQ GDILVLDEVLAVGDEAFQRKCDNFFAEIKKDPTKTVILVTHSMDAVKKYCNKAILIKDGE IIASGDKNDVADRYTLENLKQTDSQDTKEVVEESNKPWLKVLTASKPVCGKDDVFEFDIE YFFDQDVDFYFTMTLIDMKRGGLTFDPGPSSYKFHRPGHHKIRFALPVSIFNNGDFQIVA SLRVDDPDNPKKPKAIAFANGEDACVFAIRDSRNGDYALLNNDILSIKCKGLVD >gi|148337401|gb|DS264458.1| GENE 181 189928 - 190053 67 41 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIEKKGAEESFDNRSFIFFFSVLCLTGRKREYSTVVLSDQE >gi|148337401|gb|DS264458.1| GENE 182 190046 - 190279 90 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCAFYATFPREMGPFVLSFIDNLNSAIFVGQLFSNVKCVIGTCINDNDCFPSFKGLFLKR LNALLKIATIVVGRDDD >gi|148337401|gb|DS264458.1| GENE 183 190466 - 190666 59 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEDFCIRKTRDDKPFIAILASAKAGVGHTAKGILQKFGTIQTLQDTPVLTILFGISERGE SDFLTM >gi|148337401|gb|DS264458.1| GENE 184 190961 - 191194 102 77 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGEIPRRRVWRLLWLGKPCSQVREVSECLVSVFFVLGSQIVPCNCFCYFFPMDIASVLIK RIPRNPTGVRVVACKTH >gi|148337401|gb|DS264458.1| GENE 185 192329 - 194278 2071 649 aa, chain + ## HITS:1 COG:SP1765 KEGG:ns NR:ns ## COG: SP1765 COG1442 # Protein_GI_number: 15901596 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases # Organism: Streptococcus pneumoniae TIGR4 # 307 600 5 269 398 96 29.0 2e-19 MRDAALRHIQEFKGTQTLHKQQEEQRIKIFVSTHKRTSTFPSDILQPVHVGSAKSPTRFP YCWSDDEGENISNRNPRYCELTTQYWAWKNIDADYYGFCHYRRYFDFSETPHEENAFGEV IDDYIDADAAKKYRLDDESIANVVKQYDVITTPFGNLKKIIDKHGTPRALWEAAPLLHDD DLKRCYQILCSMYPDYKQDAQAFFNGNKACFCNMFIMKREIFFDYCEWMFPILEEFDKNT DYSTYSKEALRTPGHLSERLLNIYLLHHKRIGSNWKFKELQCVHFTNPEPAEQLKPLDIT DKPIVPVVFAADDNYVPQLTTTVYSAMKNADPHYFYDVTVLQRNIAWDKQERLRGFFKQF PNMNLRFTNVDRELAGYDLSTNNAHISVETYYRFLIQKVLPFYDKVLYLDSDIIINGDIA KLYNIDLQGKMLGAIRDIDFLANLNVKHGKRMGYAQTVLKMKNPYDYFQAGVLVLNTKAM REHYTIKQWLTYASNPDFIYNDQDVLNAHCEGNVLYLPWEWNVVHDCGGRVGNLFVQAPN DIYDAYMKSRNDPQIVHYAGFQKPWTDPDCDFASMYWKYARETPFYERLLKRVVKANESE IPAGVLRPKHERAVGEDNPIRKIVDPLMPIGSRRRDAVKAIGRAVRGRH >gi|148337401|gb|DS264458.1| GENE 186 194466 - 195653 1115 395 aa, chain + ## HITS:1 COG:SMc01530 KEGG:ns NR:ns ## COG: SMc01530 COG3328 # Protein_GI_number: 15966161 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 24 390 26 389 398 216 35.0 5e-56 MPDSNIIQIDQNLFETKLDRLVTEKMTQILNAMLDAEADEITGAARYERKEGRKAYRAGH YERTLTAKAGRLELRVPKLKGAVFESAVIERYRRRESSVEEALMEMCLAGVSTRQVDDIS KLLWGDRMPSQTLSDKLKRVYDDIDRWRTRPLESEYPYVFMDGVWHKRSWGGSVENVSVL VAIGVNAEGHREVIGVTEGMREDAASWEQFIRSMIERGLKGVRLVVGDRCAGLVSTVNSM LPRAKYQRCMVHFMRNVLSKVPPNHRDWASAALKAIFAMESRESALAKAGTVAAEMESRK LKAAAGCLREGIGETTAYLLPEFPTEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGNSA LMLICARTRYVTANEWSTRRYLDMSRLDDNLQEAN >gi|148337401|gb|DS264458.1| GENE 187 195654 - 197390 1094 578 aa, chain - ## HITS:1 COG:no KEGG:Blon_2383 NR:ns ## KEGG: Blon_2383 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 548 12 560 567 872 81.0 0 MNGLNMLKKIEPRIVVPLVLGMMFALGDEASNPEGHIMQIKSALCVKVLLFCVLFCVLFR FADWLIAEVQGAKREDQVEHYGFFEYGYAIKPWLKNAAVIAVCWLPYEFWLFPGVYWSDT SKQLLIHYGVERFTDHHPFALTYLFGWFADFGQWAFHNSIYGLYLLIVVQLIAAPLLFSW MLLYTRKMGVPQWLCHVELAFLALFPLFPVMFSSLAKDTISVLFFIPFCILFVDGIRTKG SSLSKPGIIITLLLCGLLTCLTKKAGVYVVVPSLLLMFLIVGLSKKAKATAFAIGAVIAI VMMVIIPKAVMPALGVAPSGKQESIPFAIQQVAHDVKYNSEDMTQQEKKLISDFLTIDYK KIPKAYDPQIADPVKGTSLKDPDLFSDFMKLWLKKTVEHPIGHLESWMGLVRGWFSFSNN DGSPSDMVVCTESAWYYDPILEYVPQWPLKASRSDTARSVYDMEQSVPVLNALFSRALWS SILPCFMLYLALRPGKGKWSRVASMLPVDMSFVYLLLVPVSGMGGEPTRYVLQLICIAPL FLAFMSESIGKTKEPLIKTMAGSARRFAHLGSCPSMGR >gi|148337401|gb|DS264458.1| GENE 188 197430 - 198557 817 375 aa, chain - ## HITS:1 COG:no KEGG:Blon_2382 NR:ns ## KEGG: Blon_2382 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 375 1 375 375 551 78.0 1e-155 MKKRVVGYDIIKSMAMFFVVMLHYSFYTRFYSSGLAGTAVTVLCVVCVPLFFAVNGALLL PRKMDEAKHYRKTLNIVIVVTIWRLLAAAFFVFVDGSHPVTLKDLVLFLLGGGFGDYPTG YFWFMNALIAVYLVLPVMKMAFDSERKLAFNALLAVLAGFTVGKDSLKLVLQILGTATNH DFASILNALDEFYIFGSYGYVLLYFLIGGMIGRYLKQKQTGELDADVHHPLFDISWGEAS AGIVVCYALTLLIQRYQHATHGTNLTVENGYWLLPSFVATILILLVLGRVNIQGIWAKVF QVIGMNTFGVYMLHLVGLVLLSRLQALPWLQFMGNLNSVAVTLLNVVLCGCVFAICLAVS VLFRKIPYINRLFAL >gi|148337401|gb|DS264458.1| GENE 189 198703 - 199647 769 314 aa, chain + ## HITS:1 COG:CAC2324 KEGG:ns NR:ns ## COG: CAC2324 COG0463 # Protein_GI_number: 15895591 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 7 307 1 303 315 334 54.0 1e-91 MPENSNVSVAVLLPCYNEEVTIGKVVRDFKAALPHADIYVYDNNSTDRTAEIAMAEGAIV RKEPRQGKGNVIRAMFEDIDADVYVMADGDDTYPADAAPAMVDKVLEGYDMVIGDRLSST YFQENKRPFHNFGNRLVRGSINGLFHADVTDIMTGYRAFSFTFVKTYPVLSRGFEVETEM TIHSLNNNLRLFEMPIQYRDRPEGSVSKLDTVGDGIKVMSTIFRMIREYKPLPFFGGLGA IIGIIGIILCGSVTVDFWHTGMVARFPTLIGAVMLVIAGILLFIAGIILDVMAKNDRKAF IIDANQFAMMRRKK >gi|148337401|gb|DS264458.1| GENE 190 200121 - 200999 829 292 aa, chain + ## HITS:1 COG:SMc01530 KEGG:ns NR:ns ## COG: SMc01530 COG3328 # Protein_GI_number: 15966161 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 2 287 107 389 398 156 33.0 5e-38 MEMCLAGVSTRQVDDISKLLWGDRMPSQTLSDKLKRVYDDIDRWRTRPLESEYPYVFMDG VWHKRSWGGSVENVSVLVAIGVNAEGHREVIGVTEGMREDAASWEQFIRSMIERGLKGVR LVVGDRCAGLVSTVNSMLPRAKYQRCMVHFMRNVLSKVPPNHRDWASAALKAIFAMESRE SALAKAGTVAAEMESRKLKAAAGCLREGIGETTAYLLPEFPTEHRRRIRTNNMIERLNRE IRRRTRVVGSFPDGNSALMLICARTRYVTANEWSTRRYLDMSRLDDNLQEAN >gi|148337401|gb|DS264458.1| GENE 191 201104 - 203698 2437 864 aa, chain - ## HITS:1 COG:CAC0706 KEGG:ns NR:ns ## COG: CAC0706 COG2730 # Protein_GI_number: 15893994 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Clostridium acetobutylicum # 616 862 420 671 722 84 24.0 7e-16 MISPKSLMKIATTASVVAMTVSVAVVPAYAMQDIAIEDTPSSFAATVDDVQNSSNSMPDN PNATLPETVSENISDDSTVVSENLAVTPEGDVQNIETGETVTDAQLVGTQSQQPDPLAKT NGESFIPVSASNVKDAVEQSVKQSVEQSSSKNGATVKLAKFDGNDYGAHWGTYNNTKAFF DYRNNLFAQQAKGVIDVSSWQGDIDWAKAKAGGVEGAIIRLGFGWGNDADAKAQRNINEC KRLGIPFGIYWYSYAEDASGSRQEGNDVVSKLRQFGVRPNDLKYPVYYDLESWTWTGHTP PNDPNVYNGIVNAWYGALQSGGYQNLGVYSYTSYLQGPLNNANIYAKTRWVAQYGPQMEF TAFGTNDRGWQYTESGHINGISGSVDMSAFGNKTSVQNGGNDDSQPSLDVRKMSAVSIPN GNYYINVRSKVASSVDIPGASGADSTAIQLYSGNGSKAQQFTFTKQSDGSYVIVNVNSGK ALDVRNGAAGNNAVVQQYSANGTNAQRWFIRDSGAGYYLQSALGNWVLDLSGGSTANGTA IHLYTPNGTVAQLFTLSSSEVNIPTDAPATIRSTKNTGLVFDVPGASTANSTQIQLYTSN GSNAQKYRFTSVGNATYRITNVNSGKALDVYGGSTANGAAFQQYDSNGTSAQQWTVRNYG SGKVTLISVNANKAVDIPGGNATQQTKLQMYTPNGTAAQQWTISKVSTPRERMDATADLH RKDLPDGTYAFGSKLKTSMKVDVAGASKSDSANVRLWGGNGTNAQKWKVTHDGNGYVTLI SVNSGKVLDVYGASTANGANVQQYVSNNTYAQKWIAIKNSDGSYTFQSALAENKVLDVSG ASTANGANVQLYSANGTNAQKWVK >gi|148337401|gb|DS264458.1| GENE 192 204319 - 204621 201 100 aa, chain + ## HITS:1 COG:no KEGG:BAD_1512 NR:ns ## KEGG: BAD_1512 # Name: not_defined # Def: putative cell wall-anchored protein # Organism: B.adolescentis # Pathway: not_defined # 1 100 121 220 220 160 99.0 2e-38 MRELNAINDCRDAVAAMNASYSKDFQLKGKIVDAFSSMDSSYDLEKLSTLYQEEVKSPKA LDCKADPSGTTSKANTERAAYDKQARTFERALTKNEANQN >gi|148337401|gb|DS264458.1| GENE 193 204618 - 206279 1226 553 aa, chain + ## HITS:1 COG:no KEGG:BAD_1513 NR:ns ## KEGG: BAD_1513 # Name: not_defined # Def: putative sialic acid-specific acetylesterase # Organism: B.adolescentis # Pathway: not_defined # 1 553 1 551 551 909 85.0 0 MNTKRLARTALAVIVTVGIVVAIIVGCGPKWGNGTATGKTGSQSTATAHTAATVDVQLPS YYMDNMVFQRDQPIVVKGNVSSTESNPIDVSKLSATLTQGKTSESVKAKVAKNGSFTCTL SAQKASLNPYSLQVQYAGKTVLKLAKVYVGDVFVAAGQSNMELNYVQYYENATYNFGNGL ITTGDLPKPLVDDNVKFVIANHDVEDTDFPLSAVNQSADAWLTADSTNSLHLSYLAQQFA MQLRAKHPNVPIGIIQTAWGGTPIRRHVQGGDIYANHIAPLKGFHVAGVLWYQGCDDANN YGTALQYESQMTALINQYRNVFGRKDLPFLYVQLARWTNYQYTQNVREAQRTTLDNANLQ DRSNVAMTVSLDTDKGTSALIHPLGKDILGARMAAQYLAMENGTKNAVSVPNGPLIERAR HTVDGKIALSFQIGTASGLKAMQPNYTKSASASAPDYTKNSKVTPLDGISNIVIPTTAAL QGFEVANSSGQWVPANAIIRGNQVVLSAANGTPLDNLSGITQVRYLFSGNPKCASMLYND FNLPASPFITIVE >gi|148337401|gb|DS264458.1| GENE 194 206571 - 207464 761 297 aa, chain + ## HITS:1 COG:no KEGG:BAD_1514 NR:ns ## KEGG: BAD_1514 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 297 51 347 347 401 99.0 1e-110 MRNRIAAAAAAGILTIGMAVLPSAASASEVAPSTDGLAGSTAISGQIDQDMAVCTDQACE AVQHLNKTNQQIKSDMETAKQHAEQLHQNAHEDADALRQYGEQAWKNYQEDREDIKNAID GAVKRGQERHDALHQDMQDTQAHLNQMHADMKETHDELKTRHDAFAASSHQWHQSFIAAL KDANSKTGQQGGSSVATGTHGITAGTNAGTTVTGVNGTTGTVCTAADTGANGAATGSVTA SGDQTAASTGALTKSEYGQLAQTGIGISLACAAILLLAGLAYAMKTFVQYKRETSED >gi|148337401|gb|DS264458.1| GENE 195 207717 - 208313 193 198 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|225352514|ref|ZP_03743537.1| ## NR: gi|225352514|ref|ZP_03743537.1| hypothetical protein BIFPSEUDO_04137 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_04137 [Bifidobacterium pseudocatenulatum DSM 20438] # 77 198 74 189 189 87 51.0 5e-16 MVDKTAAGSQQTDQRDADTRDSLAALARRRSNSSPIVLQSDVQAAPQEKQEKQEKQSEAG SALQTGEDANDDANRAEESQTVKEKDAADGPDNTQQPQMASISAITTQVLPPSFIPTATG RIRPVTGAFPAIQSASQTEQAQRRRSIRSLAAGSLRRTNIGNAEKAGDVGSAGSTGRTAG NGDTPSPRIASSAPHYAN >gi|148337401|gb|DS264458.1| GENE 196 208614 - 208805 68 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488193|ref|ZP_02029310.1| ## NR: gi|154488193|ref|ZP_02029310.1| hypothetical protein BIFADO_01765 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01765 [Bifidobacterium adolescentis L2-32] # 1 63 1 63 63 105 100.0 1e-21 MEKKEPQKPNDSNGFQGSNPGGEYEIRTREAVTPTRFPSVRHRPLGEFSNYATLSGVYPL SAT >gi|148337401|gb|DS264458.1| GENE 197 209001 - 209297 154 98 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGKDTKKGFLERRPPGSPEREHEKWASREPKARPGGPIRLKRRRATLPHPLECSTIAAPG LSYRVRNGTGRLTRAMTTAKPRSRNDSQNMAAIPAIML >gi|148337401|gb|DS264458.1| GENE 198 212763 - 212957 75 64 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154486318|ref|ZP_02027725.1| ## NR: gi|154486318|ref|ZP_02027725.1| hypothetical protein BIFADO_00125 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01772 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01772 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_00125 [Bifidobacterium adolescentis L2-32] # 1 64 27 90 90 119 100.0 6e-26 MFFGQCVPHDGVTVMPYSVDAGVEEIMGLDVPSGCPGVVWVCFWAPGPPPHRFVSVARFD AHME Prediction of potential genes in microbial genomes Time: Tue Jun 28 03:37:02 2011 Seq name: gi|148337400|gb|DS264459.1| Bifidobacterium adolescentis L2-32 Scfld0239 genomic scaffold, whole genome shotgun sequence Length of sequence - 604548 bp Number of predicted genes - 525, with homology - 492 Number of transcription units - 302, operones - 126 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 684 - 734 14.1 1 1 Tu 1 . - CDS 782 - 2113 1736 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 2191 - 2250 4.6 - Term 2557 - 2612 10.4 2 2 Op 1 . - CDS 2626 - 3645 1150 ## COG0462 Phosphoribosylpyrophosphate synthetase 3 2 Op 2 . - CDS 3759 - 4505 937 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 4 2 Op 3 . - CDS 4502 - 5110 585 ## BAD_0900 hypothetical protein 5 2 Op 4 . - CDS 5107 - 6420 1503 ## COG0014 Gamma-glutamyl phosphate reductase 6 3 Tu 1 . - CDS 6525 - 7832 1495 ## COG0112 Glycine/serine hydroxymethyltransferase - Prom 7879 - 7938 2.5 7 4 Tu 1 . + CDS 8134 - 9621 2152 ## COG0498 Threonine synthase + Term 9670 - 9710 11.1 8 5 Tu 1 . + CDS 9743 - 11047 1098 ## COG0477 Permeases of the major facilitator superfamily 9 6 Op 1 . - CDS 11014 - 11187 70 ## 10 6 Op 2 . - CDS 11247 - 11819 730 ## BLLJ_0705 hypothetical protein 11 7 Op 1 . - CDS 12018 - 12902 605 ## COG3177 Uncharacterized conserved protein 12 7 Op 2 . - CDS 12958 - 13656 646 ## BDP_1738 hypothetical protein - Prom 13872 - 13931 3.6 + Prom 13716 - 13775 3.1 13 8 Tu 1 . + CDS 13902 - 14786 191 ## PROTEIN SUPPORTED gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 14 9 Tu 1 . - CDS 15015 - 15227 86 ## gi|154488605|ref|ZP_02029454.1| hypothetical protein BIFADO_01912 - Prom 15419 - 15478 5.0 15 10 Tu 1 . + CDS 15257 - 15712 -163 ## 16 11 Tu 1 . - CDS 15781 - 16122 66 ## 17 12 Tu 1 . + CDS 16591 - 17109 328 ## COG1225 Peroxiredoxin + Prom 17136 - 17195 2.6 18 13 Tu 1 . + CDS 17238 - 18425 1092 ## COG3328 Transposase and inactivated derivatives 19 14 Tu 1 . - CDS 18592 - 18762 83 ## gi|154488611|ref|ZP_02029460.1| hypothetical protein BIFADO_01918 - Prom 18980 - 19039 4.2 + Prom 18945 - 19004 6.6 20 15 Op 1 . + CDS 19153 - 20595 1127 ## Acid345_4266 hypothetical protein 21 15 Op 2 . + CDS 20588 - 23320 1941 ## Rumal_0705 putative endonuclease, Z1 domain 22 16 Op 1 . + CDS 23459 - 24310 288 ## Acid345_4268 hypothetical protein 23 16 Op 2 . + CDS 24310 - 26730 1376 ## RPE_3249 hypothetical protein 24 17 Tu 1 . - CDS 26721 - 28238 680 ## COG0270 Site-specific DNA methylase - Prom 28274 - 28333 1.9 - Term 28425 - 28464 3.4 25 18 Op 1 . - CDS 28503 - 30527 757 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 26 18 Op 2 . - CDS 30518 - 30739 232 ## gi|154488618|ref|ZP_02029467.1| hypothetical protein BIFADO_01925 27 18 Op 3 . - CDS 30723 - 30977 215 ## gi|154488620|ref|ZP_02029469.1| hypothetical protein BIFADO_01927 - Prom 31016 - 31075 1.8 28 19 Op 1 . + CDS 31341 - 31430 80 ## 29 19 Op 2 . + CDS 31478 - 32035 687 ## COG3467 Predicted flavin-nucleotide-binding protein 30 19 Op 3 . + CDS 32085 - 32213 65 ## gi|154488623|ref|ZP_02029472.1| hypothetical protein BIFADO_01930 31 20 Op 1 . + CDS 32620 - 33123 238 ## COG2421 Predicted acetamidase/formamidase 32 20 Op 2 . + CDS 33311 - 33442 60 ## gi|154488626|ref|ZP_02029475.1| hypothetical protein BIFADO_01933 + Term 33610 - 33671 14.4 + Prom 33667 - 33726 3.7 33 21 Op 1 8/0.000 + CDS 33752 - 34129 444 ## COG1725 Predicted transcriptional regulators 34 21 Op 2 . + CDS 34126 - 35058 978 ## COG1131 ABC-type multidrug transport system, ATPase component 35 21 Op 3 . + CDS 35055 - 35771 666 ## gi|154488629|ref|ZP_02029478.1| hypothetical protein BIFADO_01936 36 22 Op 1 . - CDS 35867 - 36526 726 ## COG0637 Predicted phosphatase/phosphohexomutase 37 22 Op 2 17/0.000 - CDS 36559 - 38265 1421 ## COG0497 ATPase involved in DNA repair 38 22 Op 3 . - CDS 38274 - 39212 679 ## COG0061 Predicted sugar kinase - Prom 39447 - 39506 3.0 + Prom 39377 - 39436 2.2 39 23 Op 1 17/0.000 + CDS 39481 - 40944 1557 ## COG0168 Trk-type K+ transport systems, membrane components + Prom 40946 - 41005 3.5 40 23 Op 2 . + CDS 41032 - 41685 837 ## COG0569 K+ transport systems, NAD-binding component + Term 41701 - 41757 2.6 - Term 41598 - 41635 2.4 41 24 Op 1 . - CDS 41803 - 42564 756 ## COG1189 Predicted rRNA methylase 42 24 Op 2 . - CDS 42596 - 43630 993 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 43 24 Op 3 . - CDS 43637 - 45400 2020 ## BAD_0913 hypothetical protein 44 24 Op 4 . - CDS 45485 - 46792 656 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 - Prom 46913 - 46972 2.8 45 25 Tu 1 . + CDS 46963 - 48807 1589 ## COG4905 Predicted membrane protein + Term 48839 - 48904 19.2 - Term 48831 - 48884 10.2 46 26 Op 1 1/0.083 - CDS 48905 - 49708 585 ## COG4905 Predicted membrane protein 47 26 Op 2 . - CDS 49721 - 50158 167 ## COG1418 Predicted HD superfamily hydrolase 48 27 Op 1 16/0.000 - CDS 50263 - 51750 1667 ## COG0165 Argininosuccinate lyase - Prom 51781 - 51840 2.5 49 27 Op 2 4/0.033 - CDS 51860 - 53098 1804 ## COG0137 Argininosuccinate synthase - Prom 53125 - 53184 2.8 50 28 Op 1 4/0.033 - CDS 53194 - 53712 482 ## COG1438 Arginine repressor 51 28 Op 2 9/0.000 - CDS 53712 - 54680 1172 ## COG0078 Ornithine carbamoyltransferase 52 28 Op 3 13/0.000 - CDS 54723 - 56018 1556 ## COG4992 Ornithine/acetylornithine aminotransferase 53 28 Op 4 10/0.000 - CDS 56008 - 56964 1012 ## COG0548 Acetylglutamate kinase 54 28 Op 5 11/0.000 - CDS 56975 - 58147 1180 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 55 28 Op 6 . - CDS 58144 - 59280 1277 ## COG0002 Acetylglutamate semialdehyde dehydrogenase 56 29 Op 1 . - CDS 59382 - 60107 795 ## BAD_0926 hypothetical protein 57 29 Op 2 40/0.000 - CDS 60152 - 62761 3282 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 58 29 Op 3 4/0.033 - CDS 62769 - 63836 1545 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 59 29 Op 4 . - CDS 63903 - 64775 867 ## COG0566 rRNA methylases - Prom 64905 - 64964 1.6 + Prom 64858 - 64917 2.5 60 30 Op 1 . + CDS 64986 - 65444 358 ## BAD_0930 transporter 61 30 Op 2 . + CDS 65348 - 65716 453 ## BAD_0930 transporter 62 30 Op 3 . + CDS 65754 - 66506 960 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component + Prom 66514 - 66573 2.0 63 31 Tu 1 . + CDS 66624 - 67166 662 ## COG1611 Predicted Rossmann fold nucleotide-binding protein - Term 67123 - 67186 -0.0 64 32 Tu 1 . - CDS 67196 - 68125 988 ## COG0679 Predicted permeases - Term 68409 - 68463 14.1 65 33 Tu 1 . - CDS 68543 - 69979 1726 ## COG0174 Glutamine synthetase 66 34 Tu 1 . + CDS 70023 - 70238 85 ## - Term 70167 - 70214 13.4 67 35 Op 1 . - CDS 70242 - 71030 1082 ## BAD_0944 hypothetical protein - Prom 71065 - 71124 3.4 68 35 Op 2 . - CDS 71126 - 72607 601 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 72691 - 72725 3.5 69 36 Tu 1 . - CDS 72757 - 73359 620 ## BAD_0946 hypothetical protein - Prom 73532 - 73591 4.4 70 37 Tu 1 . + CDS 73542 - 74909 1726 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 74937 - 75002 23.1 - Term 74931 - 74985 18.4 71 38 Op 1 34/0.000 - CDS 75023 - 75901 856 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters 72 38 Op 2 4/0.033 - CDS 75903 - 77396 248 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P - Term 77455 - 77503 8.9 73 39 Tu 1 . - CDS 77517 - 78131 941 ## COG4721 Predicted membrane protein 74 40 Tu 1 . + CDS 78184 - 78267 77 ## 75 41 Op 1 . - CDS 78384 - 79505 1118 ## COG0489 ATPases involved in chromosome partitioning 76 41 Op 2 . - CDS 79571 - 82243 2802 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 77 41 Op 3 . - CDS 82328 - 85648 3092 ## BAD_0953 hypothetical protein - Prom 85735 - 85794 1.9 78 42 Tu 1 . + CDS 85753 - 87930 1198 ## BAD_0954 hypothetical protein 79 43 Tu 1 . - CDS 87894 - 88037 77 ## 80 44 Op 1 . + CDS 88027 - 88389 144 ## BDP_1333 arylsulfate sulfotransferase 81 44 Op 2 . + CDS 88358 - 89167 1009 ## COG1122 ABC-type cobalt transport system, ATPase component 82 45 Tu 1 . - CDS 89194 - 90360 1297 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Term 90410 - 90445 8.1 83 46 Tu 1 . - CDS 90472 - 91239 1098 ## COG1940 Transcriptional regulator/sugar kinase - Prom 91351 - 91410 2.2 84 47 Tu 1 . - CDS 91494 - 92576 1427 ## COG1216 Predicted glycosyltransferases + Prom 92527 - 92586 3.2 85 48 Tu 1 . + CDS 92735 - 93502 1170 ## COG0819 Putative transcription activator + Term 93545 - 93594 18.1 - Term 93533 - 93582 14.3 86 49 Op 1 . - CDS 93603 - 93908 184 ## PROTEIN SUPPORTED gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 87 49 Op 2 . - CDS 93990 - 96317 2194 ## COG1122 ABC-type cobalt transport system, ATPase component - Term 96354 - 96402 8.2 88 50 Op 1 . - CDS 96431 - 97057 910 ## COG3601 Predicted membrane protein 89 50 Op 2 . - CDS 97115 - 97237 59 ## 90 50 Op 3 . - CDS 97315 - 101133 4364 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family - Term 101174 - 101210 10.1 91 50 Op 4 . - CDS 101231 - 102646 1779 ## COG3579 Aminopeptidase C - Prom 102774 - 102833 1.9 + Prom 102700 - 102759 2.2 92 51 Tu 1 . + CDS 102789 - 103784 1108 ## BAD_0965 hypothetical protein + Term 103828 - 103895 30.5 - Term 103833 - 103866 5.4 93 52 Tu 1 . - CDS 103920 - 104645 654 ## COG1226 Kef-type K+ transport systems, predicted NAD-binding component - Prom 104667 - 104726 1.8 94 53 Op 1 . - CDS 104841 - 105833 1129 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 95 53 Op 2 . - CDS 105875 - 106354 591 ## COG1490 D-Tyr-tRNAtyr deacylase 96 53 Op 3 . - CDS 106391 - 106978 573 ## BAD_0969 hypothetical protein 97 54 Tu 1 . + CDS 107470 - 107712 66 ## gi|154488691|ref|ZP_02029540.1| hypothetical protein BIFADO_01998 - Term 107713 - 107762 -1.0 98 55 Tu 1 . - CDS 107921 - 108094 91 ## - Prom 108204 - 108263 2.3 + Prom 107920 - 107979 1.6 99 56 Tu 1 . + CDS 108072 - 108446 451 ## COG3189 Uncharacterized conserved protein + Term 108586 - 108628 1.1 100 57 Tu 1 . - CDS 108569 - 112114 3490 ## COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases - Prom 112286 - 112345 3.5 101 58 Op 1 . + CDS 112113 - 112286 86 ## 102 58 Op 2 . + CDS 112310 - 112468 71 ## + Prom 112495 - 112554 2.3 103 59 Tu 1 . + CDS 112599 - 112760 190 ## + Term 112862 - 112894 2.1 104 60 Op 1 2/0.067 - CDS 113255 - 114226 750 ## COG0582 Integrase 105 60 Op 2 27/0.000 - CDS 114313 - 115500 580 ## COG0732 Restriction endonuclease S subunits 106 60 Op 3 . - CDS 115493 - 116971 1489 ## COG0286 Type I restriction-modification system methyltransferase subunit - Prom 116999 - 117058 2.2 107 61 Op 1 . - CDS 117082 - 117381 90 ## Calkro_1118 NERD domain-containing protein 108 61 Op 2 . - CDS 117233 - 117709 139 ## Apre_1118 NERD domain-containing protein - Prom 117807 - 117866 3.8 + Prom 117792 - 117851 4.3 109 62 Tu 1 . + CDS 117998 - 120163 830 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 110 63 Op 1 . - CDS 120069 - 120290 166 ## gi|229817495|ref|ZP_04447777.1| hypothetical protein BIFANG_02758 111 63 Op 2 . - CDS 120354 - 120485 90 ## gi|154488702|ref|ZP_02029551.1| hypothetical protein BIFADO_02009 - Prom 120554 - 120613 4.7 + Prom 121028 - 121087 2.2 112 64 Tu 1 . + CDS 121324 - 122103 607 ## COG0388 Predicted amidohydrolase + Term 122104 - 122151 2.6 113 65 Tu 1 . - CDS 122144 - 122800 785 ## COG4721 Predicted membrane protein - Prom 122958 - 123017 3.1 114 66 Tu 1 . + CDS 123093 - 123845 841 ## COG1434 Uncharacterized conserved protein - Term 123791 - 123824 -0.4 115 67 Tu 1 . - CDS 123909 - 124541 519 ## COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases - Prom 124583 - 124642 2.7 - Term 124589 - 124626 8.2 116 68 Op 1 . - CDS 124677 - 126041 1933 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 117 68 Op 2 . - CDS 126094 - 127389 1337 ## COG0349 Ribonuclease D 118 68 Op 3 . - CDS 127382 - 128014 557 ## BAD_0990 hypothetical protein 119 69 Tu 1 . + CDS 128098 - 128205 70 ## gi|154488714|ref|ZP_02029563.1| hypothetical protein BIFADO_02021 - Term 128095 - 128145 12.1 120 70 Op 1 11/0.000 - CDS 128202 - 129080 1018 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 129123 - 129170 11.3 121 70 Op 2 . - CDS 129218 - 131593 3376 ## COG1882 Pyruvate-formate lyase - Prom 131645 - 131704 2.9 - Term 131668 - 131733 16.4 122 71 Op 1 . - CDS 131742 - 131951 267 ## BAD_0993 hypothetical protein 123 71 Op 2 . - CDS 131995 - 133692 2288 ## COG0171 NAD synthase - Prom 133717 - 133776 2.2 124 72 Tu 1 . - CDS 133778 - 134947 1368 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 125 73 Tu 1 . + CDS 135037 - 135858 931 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 135883 - 135942 4.9 126 74 Op 1 10/0.000 + CDS 136057 - 136902 1437 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen + Term 136929 - 136966 6.1 127 74 Op 2 32/0.000 + CDS 136990 - 137814 1078 ## COG1135 ABC-type metal ion transport system, ATPase component 128 74 Op 3 . + CDS 137816 - 138496 1150 ## COG2011 ABC-type metal ion transport system, permease component + Term 138525 - 138568 11.1 - Term 138513 - 138555 10.1 129 75 Tu 1 . - CDS 138592 - 139041 200 ## PROTEIN SUPPORTED gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 - Prom 139263 - 139322 1.6 130 76 Tu 1 . + CDS 139165 - 139320 97 ## gi|225352307|ref|ZP_03743330.1| hypothetical protein BIFPSEUDO_03923 + Prom 139328 - 139387 1.9 131 77 Tu 1 . + CDS 139425 - 140765 1128 ## COG0582 Integrase - Term 140784 - 140830 -0.8 132 78 Op 1 . - CDS 140850 - 141464 342 ## gi|154488727|ref|ZP_02029576.1| hypothetical protein BIFADO_02034 133 78 Op 2 . - CDS 141461 - 142183 604 ## gi|154488728|ref|ZP_02029577.1| hypothetical protein BIFADO_02035 134 78 Op 3 . - CDS 142198 - 143103 730 ## BAD_1255 sulfate adenylyltransferase, subunit 2 135 78 Op 4 . - CDS 143100 - 143531 445 ## gi|154488730|ref|ZP_02029579.1| hypothetical protein BIFADO_02037 136 78 Op 5 . - CDS 143543 - 144097 670 ## BAD_1255 sulfate adenylyltransferase, subunit 2 137 79 Op 1 . + CDS 144406 - 144714 312 ## gi|154488733|ref|ZP_02029582.1| hypothetical protein BIFADO_02040 138 79 Op 2 . + CDS 144711 - 145019 409 ## gi|154488734|ref|ZP_02029583.1| hypothetical protein BIFADO_02041 + Term 145030 - 145081 18.2 - Term 145020 - 145066 14.7 139 80 Op 1 . - CDS 145081 - 145821 913 ## BL1465 hypothetical protein 140 80 Op 2 23/0.000 - CDS 145932 - 146684 791 ## COG2801 Transposase and inactivated derivatives 141 80 Op 3 . - CDS 146768 - 147055 414 ## COG2963 Transposase and inactivated derivatives 142 80 Op 4 . - CDS 147071 - 147241 93 ## 143 81 Tu 1 . + CDS 147210 - 147890 587 ## COG0550 Topoisomerase IA 144 82 Tu 1 . + CDS 148101 - 148562 291 ## BAD_1269 hypothetical protein + Prom 148730 - 148789 2.1 145 83 Tu 1 . + CDS 148972 - 149370 328 ## BAD_1270 hypothetical protein + Term 149556 - 149588 1.7 - Term 149434 - 149482 7.2 146 84 Tu 1 . - CDS 149589 - 150065 -8 ## gi|154488743|ref|ZP_02029592.1| hypothetical protein BIFADO_02050 - Prom 150195 - 150254 2.0 + Prom 150614 - 150673 4.7 147 85 Tu 1 . + CDS 150803 - 152158 930 ## BAD_1272 hypothetical protein 148 86 Tu 1 . - CDS 152174 - 153202 1054 ## DSY5047 hypothetical protein 149 87 Tu 1 . - CDS 153310 - 153531 317 ## BAD_1242 hypothetical protein 150 88 Op 1 23/0.000 - CDS 153669 - 154421 782 ## COG2801 Transposase and inactivated derivatives 151 88 Op 2 . - CDS 154505 - 154792 414 ## COG2963 Transposase and inactivated derivatives 152 88 Op 3 . - CDS 154808 - 154984 257 ## gi|154488749|ref|ZP_02029598.1| hypothetical protein BIFADO_02056 153 88 Op 4 . - CDS 154981 - 156021 1157 ## BAD_1246 hypothetical protein 154 89 Op 1 . + CDS 156147 - 156692 95 ## gi|154488751|ref|ZP_02029600.1| hypothetical protein BIFADO_02058 155 89 Op 2 . + CDS 156590 - 156814 110 ## gi|154488752|ref|ZP_02029601.1| hypothetical protein BIFADO_02059 + Term 156884 - 156935 10.2 - Term 156875 - 156918 6.3 156 90 Op 1 . - CDS 156928 - 157422 588 ## BAD_1247 two-component sensor histidine kinase involved in chemotaxis 157 90 Op 2 . - CDS 157419 - 157826 313 ## gi|154488754|ref|ZP_02029603.1| hypothetical protein BIFADO_02061 158 90 Op 3 . - CDS 157826 - 159223 1637 ## BAD_1248 hypothetical protein 159 91 Op 1 . - CDS 159378 - 160865 1758 ## BAD_1249 hypothetical protein 160 91 Op 2 . - CDS 160866 - 162890 2373 ## BAD_1250 hypothetical protein 161 91 Op 3 . - CDS 162895 - 163212 418 ## BL1486 hypothetical protein 162 91 Op 4 . - CDS 163301 - 163819 374 ## BLD_0372 hypothetical protein 163 91 Op 5 . - CDS 163834 - 165081 759 ## BDP_0966 hypothetical protein 164 91 Op 6 . - CDS 165103 - 165753 675 ## BLD_0374 hypothetical protein - Term 165856 - 165886 2.3 165 92 Tu 1 . - CDS 165954 - 169085 4789 ## Blon_1259 allergen V5/TPX-1 family protein 166 93 Tu 1 . - CDS 169268 - 170227 929 ## COG3764 Sortase (surface protein transpeptidase) 167 94 Tu 1 . - CDS 170365 - 174807 4518 ## BLLJ_0963 hypothetical protein 168 95 Tu 1 . - CDS 174909 - 176498 2310 ## BLLJ_0962 hypothetical protein - Term 176633 - 176681 12.4 169 96 Tu 1 . - CDS 176720 - 180667 5402 ## BDP_0965 hypothetical protein 170 97 Tu 1 . + CDS 180717 - 180986 135 ## - Term 180870 - 180904 7.0 171 98 Tu 1 . - CDS 180932 - 181954 962 ## BDP_0966 hypothetical protein 172 99 Op 1 . - CDS 182130 - 182351 135 ## gi|154488770|ref|ZP_02029619.1| hypothetical protein BIFADO_02077 173 99 Op 2 . - CDS 182348 - 182563 211 ## gi|154488771|ref|ZP_02029620.1| hypothetical protein BIFADO_02078 174 99 Op 3 . - CDS 182578 - 183195 607 ## COG1192 ATPases involved in chromosome partitioning 175 99 Op 4 . - CDS 183250 - 183705 322 ## BLD_0387 hypothetical protein 176 99 Op 5 . - CDS 183702 - 184967 749 ## BLIF_1196 hypothetical protein 177 99 Op 6 . - CDS 184964 - 185110 177 ## 178 99 Op 7 . - CDS 185110 - 185250 119 ## gi|154488776|ref|ZP_02029625.1| hypothetical protein BIFADO_02083 179 99 Op 8 . - CDS 185256 - 185612 304 ## gi|154488777|ref|ZP_02029626.1| hypothetical protein BIFADO_02084 180 99 Op 9 . - CDS 185631 - 185840 239 ## gi|154488778|ref|ZP_02029627.1| hypothetical protein BIFADO_02085 181 100 Op 1 . - CDS 186271 - 186630 261 ## BLIF_1199 hypothetical protein 182 100 Op 2 . - CDS 186630 - 186851 175 ## gi|291457743|ref|ZP_06597133.1| toxin-antitoxin system, antitoxin component, Xre family - Prom 186885 - 186944 4.4 + Prom 186887 - 186946 1.6 183 101 Tu 1 . + CDS 186974 - 188047 856 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family + Term 188073 - 188118 10.1 - Term 188063 - 188101 4.2 184 102 Tu 1 . - CDS 188160 - 190481 2696 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases 185 103 Op 1 . - CDS 190601 - 191077 571 ## COG0756 dUTPase 186 103 Op 2 . - CDS 191077 - 191370 502 ## BAD_1004 hypothetical protein - Prom 191425 - 191484 2.9 + Prom 191385 - 191444 2.2 187 104 Tu 1 . + CDS 191519 - 192514 633 ## BAD_1005 hypothetical protein - Term 192441 - 192476 3.2 188 105 Tu 1 . - CDS 192570 - 193796 791 ## COG1524 Uncharacterized proteins of the AP superfamily + Prom 193785 - 193844 3.2 189 106 Tu 1 . + CDS 193882 - 196557 2330 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit + Term 196574 - 196628 10.5 190 107 Tu 1 . - CDS 196681 - 201525 2861 ## COG1201 Lhr-like helicases 191 108 Tu 1 . - CDS 201652 - 202839 1326 ## COG0477 Permeases of the major facilitator superfamily - Prom 202885 - 202944 2.7 - Term 203021 - 203069 3.2 192 109 Op 1 . - CDS 203082 - 205406 2744 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit - Term 205424 - 205479 11.0 193 109 Op 2 . - CDS 205501 - 206898 1707 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 206921 - 206980 3.1 194 110 Tu 1 . - CDS 207059 - 207703 371 ## BAD_1012 hypothetical protein - Prom 207933 - 207992 1.6 195 111 Tu 1 . + CDS 207913 - 209001 765 ## COG0142 Geranylgeranyl pyrophosphate synthase + Prom 209011 - 209070 2.2 196 112 Tu 1 . + CDS 209124 - 211295 2012 ## COG0515 Serine/threonine protein kinase + Term 211299 - 211337 0.1 - Term 211307 - 211365 23.6 197 113 Tu 1 . - CDS 211394 - 212122 893 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase - Prom 212157 - 212216 4.0 198 114 Tu 1 . + CDS 212173 - 212739 433 ## BAD_1016 hypothetical protein 199 115 Op 1 . - CDS 212841 - 213365 479 ## COG2801 Transposase and inactivated derivatives 200 115 Op 2 . - CDS 213434 - 213634 107 ## BAD_1018 IS150 putative transposase 201 115 Op 3 . - CDS 213646 - 214065 299 ## BDP_0120 transposase 202 116 Tu 1 . - CDS 214177 - 215232 1389 ## COG0547 Anthranilate phosphoribosyltransferase - Prom 215278 - 215337 1.8 - Term 215348 - 215397 9.3 203 117 Op 1 7/0.000 - CDS 215423 - 218299 3753 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 218405 - 218464 1.8 - Term 218408 - 218449 6.1 204 117 Op 2 . - CDS 218478 - 219140 998 ## PROTEIN SUPPORTED gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 - Prom 219210 - 219269 4.1 205 118 Tu 1 . - CDS 219762 - 220187 272 ## BAD_1023 RecX-like protein - Term 220302 - 220346 1.1 206 119 Tu 1 . - CDS 220461 - 221603 1541 ## COG0468 RecA/RadA recombinase - Prom 221798 - 221857 3.3 207 120 Tu 1 . - CDS 221866 - 222099 215 ## BDP_1422 hypothetical protein - Term 222126 - 222163 7.5 208 121 Op 1 . - CDS 222182 - 222691 491 ## BAD_1026 DNA binding protein 209 121 Op 2 6/0.000 - CDS 222754 - 223320 447 ## COG1546 Uncharacterized protein (competence- and mitomycin-induced) 210 121 Op 3 . - CDS 223327 - 224001 855 ## COG0558 Phosphatidylglycerophosphate synthase 211 121 Op 4 . - CDS 224061 - 226865 2601 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 226926 - 226985 2.5 212 122 Op 1 . + CDS 227709 - 228695 1201 ## COG4124 Beta-mannanase 213 122 Op 2 . + CDS 228701 - 230110 1564 ## BAD_1030 mannan endo-1,4-beta-mannosidase precursor + Term 230152 - 230202 10.4 - Term 230137 - 230189 19.3 214 123 Op 1 . - CDS 230239 - 231249 1318 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 215 123 Op 2 . - CDS 231233 - 232672 504 ## PROTEIN SUPPORTED gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase + Prom 232772 - 232831 1.8 216 124 Tu 1 . + CDS 232878 - 233561 918 ## COG2357 Uncharacterized protein conserved in bacteria + Term 233575 - 233624 11.6 - Term 233563 - 233612 11.6 217 125 Op 1 . - CDS 233633 - 234607 1283 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily - Term 234635 - 234669 5.2 218 125 Op 2 . - CDS 234710 - 235591 1254 ## COG0670 Integral membrane protein, interacts with FtsH 219 126 Op 1 . - CDS 235708 - 236478 972 ## BAD_1036 hypothetical protein 220 126 Op 2 . - CDS 236475 - 236831 95 ## 221 127 Op 1 . + CDS 236641 - 238014 1228 ## BAD_1037 atypical histidine kinase sensor of two-component system 222 127 Op 2 . + CDS 238011 - 238703 365 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 238722 - 238781 2.6 223 128 Tu 1 . + CDS 238833 - 240935 1944 ## COG1479 Uncharacterized conserved protein 224 129 Op 1 19/0.000 - CDS 240999 - 241703 721 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 225 129 Op 2 . - CDS 241703 - 242917 721 ## COG4585 Signal transduction histidine kinase 226 129 Op 3 . - CDS 242914 - 243135 107 ## gi|154488830|ref|ZP_02029679.1| hypothetical protein BIFADO_02138 227 130 Op 1 . + CDS 243023 - 244120 362 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 228 130 Op 2 . + CDS 244165 - 245415 1251 ## BAD_1043 hypothetical protein 229 130 Op 3 . + CDS 245402 - 246691 958 ## BAD_1044 hypothetical protein + Term 246700 - 246756 12.8 230 131 Tu 1 . + CDS 246807 - 247199 381 ## COG0346 Lactoylglutathione lyase and related lyases - Term 247073 - 247111 1.0 231 132 Tu 1 . - CDS 247224 - 248585 1491 ## COG0534 Na+-driven multidrug efflux pump - Term 248613 - 248661 8.2 232 133 Tu 1 . - CDS 248686 - 249351 775 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 249397 - 249456 4.6 233 134 Tu 1 . + CDS 249492 - 250505 978 ## COG2207 AraC-type DNA-binding domain-containing proteins - Term 250496 - 250559 20.1 234 135 Op 1 . - CDS 250587 - 250805 281 ## BAD_1049 non-ribosomal peptide synthetase 235 135 Op 2 . - CDS 250802 - 251029 370 ## Achl_4624 Glycosyl hydrolase family 32 domain protein - Prom 251127 - 251186 3.6 236 136 Op 1 . - CDS 251194 - 252222 854 ## COG1609 Transcriptional regulators 237 136 Op 2 . - CDS 252250 - 254949 3774 ## COG1048 Aconitase A 238 136 Op 3 . - CDS 255031 - 257487 2635 ## COG0474 Cation transport ATPase 239 137 Op 1 . - CDS 257643 - 258236 611 ## BAD_1054 hypothetical protein 240 137 Op 2 . - CDS 258233 - 259498 1206 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 241 137 Op 3 . - CDS 259498 - 260238 826 ## BAD_1056 hypothetical protein 242 137 Op 4 . - CDS 260268 - 261116 1135 ## BAD_1057 hypothetical protein - Prom 261146 - 261205 1.7 243 138 Tu 1 . - CDS 261239 - 262099 922 ## COG0708 Exonuclease III - Term 262114 - 262156 10.4 244 139 Op 1 13/0.000 - CDS 262173 - 264182 747 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 245 139 Op 2 49/0.000 - CDS 264204 - 265172 1282 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 246 139 Op 3 21/0.000 - CDS 265193 - 266119 1417 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components - Prom 266281 - 266340 2.2 - Term 266365 - 266408 10.9 247 139 Op 4 . - CDS 266447 - 268108 2712 ## COG4166 ABC-type oligopeptide transport system, periplasmic component - Prom 268268 - 268327 2.5 - Term 268319 - 268365 4.3 248 140 Tu 1 . - CDS 268402 - 269328 845 ## COG0582 Integrase + Prom 269407 - 269466 2.1 249 141 Op 1 36/0.000 + CDS 269495 - 270337 303 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 250 141 Op 2 . + CDS 270334 - 273180 3140 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 251 141 Op 3 . + CDS 273215 - 273472 255 ## BDP_1497 hypothetical protein + Term 273508 - 273556 13.7 - Term 273491 - 273549 16.2 252 142 Op 1 . - CDS 273570 - 274610 1212 ## COG0287 Prephenate dehydrogenase 253 142 Op 2 . - CDS 274604 - 275614 1112 ## COG0077 Prephenate dehydratase 254 142 Op 3 . - CDS 275654 - 276214 557 ## BAD_1068 hypothetical protein - Term 276238 - 276301 18.1 255 143 Tu 1 . - CDS 276365 - 278296 2802 ## COG1217 Predicted membrane GTPase involved in stress response - Prom 278387 - 278446 4.3 - Term 278411 - 278462 17.1 256 144 Op 1 1/0.083 - CDS 278488 - 279843 1644 ## COG0477 Permeases of the major facilitator superfamily 257 144 Op 2 . - CDS 279911 - 280720 622 ## COG1051 ADP-ribose pyrophosphatase - Prom 280756 - 280815 1.7 - Term 280805 - 280841 7.6 258 145 Op 1 1/0.083 - CDS 280848 - 281687 1061 ## COG1192 ATPases involved in chromosome partitioning 259 145 Op 2 . - CDS 281786 - 282739 667 ## COG4974 Site-specific recombinase XerD - Term 282913 - 282951 6.0 260 146 Op 1 . - CDS 282985 - 283368 635 ## PROTEIN SUPPORTED gi|119026092|ref|YP_909937.1| 50S ribosomal protein L20 261 146 Op 2 . - CDS 283421 - 283615 317 ## PROTEIN SUPPORTED gi|119026093|ref|YP_909938.1| 50S ribosomal protein L35 262 146 Op 3 . - CDS 283634 - 284332 894 ## COG0290 Translation initiation factor 3 (IF-3) - Prom 284538 - 284597 2.1 - Term 284540 - 284592 21.5 263 147 Tu 1 . - CDS 284621 - 286507 2679 ## COG0367 Asparagine synthase (glutamine-hydrolyzing) - Prom 286617 - 286676 4.2 + Prom 286458 - 286517 2.4 264 148 Op 1 . + CDS 286696 - 287442 678 ## COG1564 Thiamine pyrophosphokinase 265 148 Op 2 . + CDS 287614 - 288669 1602 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase + Term 288717 - 288754 8.5 266 149 Tu 1 . + CDS 288787 - 289302 639 ## COG2606 Uncharacterized conserved protein - Term 289318 - 289377 18.5 267 150 Tu 1 . - CDS 289395 - 290399 384 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Prom 290537 - 290596 3.1 + Prom 290494 - 290553 1.8 268 151 Tu 1 . + CDS 290586 - 291536 1212 ## COG2017 Galactose mutarotase and related enzymes + Prom 291561 - 291620 2.6 269 152 Tu 1 . + CDS 291652 - 291726 129 ## + Term 291765 - 291804 4.0 - Term 291753 - 291792 2.1 270 153 Op 1 . - CDS 291883 - 292134 230 ## BAD_1083 hypothetical protein 271 153 Op 2 . - CDS 292131 - 292676 678 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog + Prom 292740 - 292799 2.4 272 154 Op 1 . + CDS 292843 - 294396 1874 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 273 154 Op 2 1/0.083 + CDS 294416 - 295660 1704 ## COG3919 Predicted ATP-grasp enzyme 274 154 Op 3 . + CDS 295690 - 296382 858 ## COG1794 Aspartate racemase + Term 296433 - 296492 21.3 - Term 296424 - 296478 17.0 275 155 Tu 1 . - CDS 296541 - 298175 1762 ## COG0285 Folylpolyglutamate synthase - Prom 298219 - 298278 3.5 + Prom 298167 - 298226 2.5 276 156 Op 1 . + CDS 298322 - 299923 2023 ## COG0006 Xaa-Pro aminopeptidase 277 156 Op 2 . + CDS 299933 - 300454 623 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 300480 - 300529 18.1 - Term 300468 - 300516 16.0 278 157 Op 1 13/0.000 - CDS 300542 - 302254 2289 ## COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase 279 157 Op 2 49/0.000 - CDS 302259 - 303434 1733 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 280 157 Op 3 38/0.000 - CDS 303436 - 304509 262 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 - Term 304535 - 304591 13.1 281 157 Op 4 . - CDS 304601 - 306226 2642 ## COG0747 ABC-type dipeptide transport system, periplasmic component - Prom 306381 - 306440 3.0 + Prom 306518 - 306577 5.8 282 158 Op 1 . + CDS 306618 - 307820 313 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 283 158 Op 2 . + CDS 307851 - 308750 1381 ## COG0524 Sugar kinases, ribokinase family + Term 308777 - 308824 13.3 + Prom 309351 - 309410 3.5 284 159 Tu 1 . + CDS 309627 - 310031 476 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase + Term 310075 - 310136 14.1 - Term 310061 - 310122 21.6 285 160 Op 1 5/0.017 - CDS 310197 - 311186 204 ## PROTEIN SUPPORTED gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 286 160 Op 2 26/0.000 - CDS 311186 - 312751 1796 ## COG0773 UDP-N-acetylmuramate-alanine ligase 287 160 Op 3 31/0.000 - CDS 312841 - 314022 1189 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 288 160 Op 4 25/0.000 - CDS 314144 - 315391 1379 ## COG0772 Bacterial cell division membrane protein 289 160 Op 5 28/0.000 - CDS 315378 - 316811 1754 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 290 160 Op 6 28/0.000 - CDS 316894 - 317991 1258 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 291 160 Op 7 . - CDS 318041 - 319525 1535 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 292 160 Op 8 . - CDS 319586 - 320431 890 ## BAD_1106 hypothetical protein 293 160 Op 9 . - CDS 320499 - 322301 1960 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 294 160 Op 10 . - CDS 322298 - 322759 536 ## BAD_1108 hypothetical protein 295 160 Op 11 29/0.000 - CDS 322761 - 323792 825 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 296 160 Op 12 . - CDS 323792 - 324307 465 ## COG2001 Uncharacterized protein conserved in bacteria - Prom 324375 - 324434 1.6 + Prom 324482 - 324541 2.6 297 161 Op 1 . + CDS 324568 - 326847 2367 ## COG3973 Superfamily I DNA and RNA helicases 298 161 Op 2 . + CDS 326858 - 328057 1760 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases + Term 328081 - 328141 17.5 - Term 328072 - 328126 16.8 299 162 Op 1 . - CDS 328174 - 328713 416 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 300 162 Op 2 . - CDS 328676 - 328978 195 ## BAD_1114 hypothetical protein - Prom 329018 - 329077 3.1 + Prom 329049 - 329108 3.8 301 163 Tu 1 . + CDS 329129 - 329842 863 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) + Term 329868 - 329918 7.3 - Term 329955 - 330001 3.1 302 164 Tu 1 . - CDS 330022 - 330963 1187 ## COG1230 Co/Zn/Cd efflux system component - Term 331036 - 331079 13.1 303 165 Op 1 . - CDS 331139 - 332101 1381 ## COG0039 Malate/lactate dehydrogenases - Prom 332167 - 332226 2.2 304 165 Op 2 . - CDS 332363 - 333823 599 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 + Prom 333846 - 333905 1.7 305 166 Op 1 . + CDS 333986 - 334597 613 ## COG2813 16S RNA G1207 methylase RsmC 306 166 Op 2 . + CDS 334594 - 338703 4385 ## COG1643 HrpA-like helicases - Term 338533 - 338575 5.4 307 167 Op 1 . - CDS 338749 - 339825 926 ## BBIF_0726 hypothetical protein 308 167 Op 2 . - CDS 339907 - 340998 985 ## BBIF_0724 hypothetical protein 309 167 Op 3 . - CDS 341021 - 341680 204 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 310 167 Op 4 . - CDS 341685 - 342377 616 ## BBIF_0288 hypothetical protein - Prom 342450 - 342509 1.9 - Term 342407 - 342436 0.3 311 168 Tu 1 . - CDS 342581 - 342724 126 ## gi|154488919|ref|ZP_02029768.1| hypothetical protein BIFADO_02228 312 169 Tu 1 . + CDS 342653 - 342802 66 ## gi|154488918|ref|ZP_02029767.1| hypothetical protein BIFADO_02227 313 170 Op 1 . - CDS 342843 - 343067 234 ## gi|154488921|ref|ZP_02029770.1| hypothetical protein BIFADO_02230 314 170 Op 2 . - CDS 343069 - 343725 557 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Prom 344181 - 344240 2.3 315 171 Tu 1 . + CDS 344260 - 345000 759 ## BBIF_0288 hypothetical protein 316 172 Tu 1 . - CDS 345016 - 346221 1593 ## COG2814 Arabinose efflux permease - Prom 346293 - 346352 1.8 + Prom 346230 - 346289 2.6 317 173 Tu 1 . + CDS 346394 - 347239 959 ## BAD_1122 hypothetical protein + Term 347333 - 347397 4.3 - Term 347330 - 347375 13.1 318 174 Op 1 . - CDS 347411 - 348772 1724 ## COG0174 Glutamine synthetase 319 174 Op 2 25/0.000 - CDS 348811 - 349536 1039 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 320 174 Op 3 . - CDS 349648 - 350295 824 ## COG0118 Glutamine amidotransferase 321 174 Op 4 . - CDS 350347 - 351117 929 ## BAD_1126 hypothetical protein 322 174 Op 5 13/0.000 - CDS 351117 - 351716 822 ## COG0131 Imidazoleglycerol-phosphate dehydratase 323 174 Op 6 19/0.000 - CDS 351887 - 353062 1620 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 324 174 Op 7 . - CDS 353059 - 354441 1662 ## COG0141 Histidinol dehydrogenase - Prom 354461 - 354520 1.9 - Term 354567 - 354610 7.5 325 175 Op 1 2/0.067 - CDS 354652 - 358242 4544 ## COG0587 DNA polymerase III, alpha subunit 326 175 Op 2 15/0.000 - CDS 358306 - 359235 241 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 327 175 Op 3 . - CDS 359232 - 359795 566 ## COG0597 Lipoprotein signal peptidase 328 175 Op 4 . - CDS 359817 - 361382 2340 ## BAD_1133 hypothetical protein 329 176 Tu 1 . - CDS 361492 - 361773 167 ## BAD_1134 hypothetical protein - Term 361792 - 361827 2.0 330 177 Op 1 . - CDS 361865 - 362143 437 ## COG1799 Uncharacterized protein conserved in bacteria 331 177 Op 2 . - CDS 362140 - 362346 296 ## BAD_1135 hypothetical protein 332 177 Op 3 . - CDS 362377 - 363633 1709 ## COG0206 Cell division GTPase - Prom 363716 - 363775 1.8 333 178 Op 1 . - CDS 363786 - 365015 450 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase 334 178 Op 2 . - CDS 365057 - 366532 2048 ## COG0423 Glycyl-tRNA synthetase (class II) - Prom 366671 - 366730 2.7 - Term 366702 - 366738 2.0 335 179 Op 1 . - CDS 366783 - 367394 639 ## gi|154488948|ref|ZP_02029797.1| hypothetical protein BIFADO_02257 336 179 Op 2 . - CDS 367410 - 368384 1029 ## gi|154488949|ref|ZP_02029798.1| hypothetical protein BIFADO_02258 337 179 Op 3 . - CDS 368393 - 369442 1232 ## COG4972 Tfp pilus assembly protein, ATPase PilM 338 179 Op 4 . - CDS 369482 - 370306 706 ## COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 339 179 Op 5 . - CDS 370312 - 372729 2134 ## gi|154488952|ref|ZP_02029801.1| hypothetical protein BIFADO_02261 340 179 Op 6 . - CDS 372781 - 374058 1579 ## COG1459 Type II secretory pathway, component PulF - Term 374100 - 374142 10.0 341 180 Tu 1 . - CDS 374169 - 374597 560 ## gi|154488954|ref|ZP_02029803.1| hypothetical protein BIFADO_02263 - Term 375043 - 375078 7.2 342 181 Op 1 . - CDS 375095 - 375631 233 ## gi|154488956|ref|ZP_02029805.1| hypothetical protein BIFADO_02265 - Term 375632 - 375677 0.6 343 181 Op 2 . - CDS 375783 - 376562 483 ## gi|154488957|ref|ZP_02029806.1| hypothetical protein BIFADO_02266 - Prom 376640 - 376699 1.6 + Prom 376680 - 376739 2.5 344 182 Tu 1 2/0.067 + CDS 376875 - 378632 1760 ## COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB + Term 378696 - 378745 11.1 345 183 Tu 1 . + CDS 378772 - 380574 1703 ## COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT 346 184 Op 1 . + CDS 380736 - 382517 1198 ## BAD_0060 hypothetical protein 347 184 Op 2 . + CDS 382561 - 383712 1024 ## BAD_1139 hypothetical protein + Term 383735 - 383778 -0.6 348 185 Op 1 . - CDS 383737 - 384330 589 ## BAD_1140 hypothetical protein 349 185 Op 2 . - CDS 384317 - 384907 424 ## BAD_1141 phosphate ABC transporter - Prom 385072 - 385131 2.5 - Term 385147 - 385199 1.0 350 186 Op 1 . - CDS 385348 - 385602 225 ## COG0716 Flavodoxins 351 186 Op 2 . - CDS 385617 - 386477 992 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase - Prom 386613 - 386672 4.0 + Prom 386581 - 386640 2.9 352 187 Tu 1 . + CDS 386721 - 387164 456 ## COG0789 Predicted transcriptional regulators + Prom 387296 - 387355 2.1 353 188 Op 1 6/0.000 + CDS 387446 - 388330 1199 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family + Prom 388359 - 388418 3.0 354 188 Op 2 . + CDS 388463 - 389218 1043 ## COG0352 Thiamine monophosphate synthase - Term 389230 - 389260 -1.0 355 189 Tu 1 . - CDS 389280 - 389411 64 ## 356 190 Op 1 . + CDS 389347 - 390189 1172 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 357 190 Op 2 . + CDS 390278 - 390643 585 ## COG0011 Uncharacterized conserved protein + Term 390689 - 390722 1.1 358 191 Tu 1 . + CDS 390746 - 391789 993 ## COG1609 Transcriptional regulators + Term 391830 - 391875 -0.7 + Prom 391964 - 392023 3.5 359 192 Op 1 . + CDS 392136 - 393467 1705 ## COG0477 Permeases of the major facilitator superfamily + Prom 393560 - 393619 2.1 360 192 Op 2 . + CDS 393670 - 395226 1969 ## COG1621 Beta-fructosidases (levanase/invertase) + Term 395278 - 395339 20.1 + Prom 395388 - 395447 4.1 361 193 Op 1 21/0.000 + CDS 395553 - 396356 1007 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component + Term 396522 - 396561 0.4 + Prom 396358 - 396417 3.2 362 193 Op 2 . + CDS 396627 - 397694 1491 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 363 193 Op 3 . + CDS 397866 - 399194 744 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase + Term 399217 - 399259 11.1 - Term 399205 - 399245 9.1 364 194 Op 1 4/0.033 - CDS 399353 - 400144 1068 ## COG0020 Undecaprenyl pyrophosphate synthase 365 194 Op 2 . - CDS 400150 - 400890 533 ## COG1381 Recombinational DNA repair protein (RecF pathway) 366 194 Op 3 . - CDS 400974 - 402599 1601 ## BAD_1156 hypothetical protein - Prom 402717 - 402776 1.6 367 195 Op 1 . - CDS 402790 - 403989 1440 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 368 195 Op 2 . - CDS 404054 - 405232 1380 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase - Prom 405258 - 405317 2.2 - Term 405349 - 405384 6.5 369 195 Op 3 . - CDS 405400 - 406953 1616 ## BAD_1159 hypothetical protein - Prom 407177 - 407236 76.9 + TRNA 407162 - 407235 89.7 # Val TAC 0 0 - Term 407352 - 407401 16.2 370 196 Op 1 . - CDS 407434 - 407850 510 ## BAD_1160 hypothetical protein 371 196 Op 2 . - CDS 407969 - 408883 958 ## COG3480 Predicted secreted protein containing a PDZ domain 372 197 Tu 1 . + CDS 408937 - 410496 2053 ## COG5282 Uncharacterized conserved protein - Term 410275 - 410322 1.1 373 198 Tu 1 . - CDS 410479 - 411978 1090 ## COG0210 Superfamily I DNA and RNA helicases - Prom 412082 - 412141 2.7 374 199 Op 1 . + CDS 412092 - 413663 1502 ## BAD_1164 hypothetical protein 375 199 Op 2 . + CDS 413715 - 413939 444 ## BDP_1626 ATP-binding protein + Term 413974 - 414027 11.6 - Term 413822 - 413859 -0.7 376 200 Tu 1 . - CDS 414065 - 414967 893 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) - Prom 415008 - 415067 2.4 377 201 Tu 1 . + CDS 415053 - 415751 807 ## COG4243 Predicted membrane protein - Term 415770 - 415803 5.9 378 202 Tu 1 . - CDS 415840 - 416739 1253 ## COG0253 Diaminopimelate epimerase 379 203 Op 1 . + CDS 416825 - 417601 869 ## COG0796 Glutamate racemase 380 203 Op 2 . + CDS 417680 - 418528 975 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily + Prom 418558 - 418617 1.6 381 204 Op 1 . + CDS 418666 - 419892 1184 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities 382 204 Op 2 . + CDS 419912 - 420154 65 ## 383 204 Op 3 . + CDS 420093 - 420638 646 ## COG3152 Predicted membrane protein + Prom 420708 - 420767 2.8 384 204 Op 4 . + CDS 420820 - 422469 2316 ## COG4166 ABC-type oligopeptide transport system, periplasmic component + Term 422512 - 422568 23.0 - Term 422498 - 422554 23.0 385 205 Tu 1 . - CDS 422605 - 423549 1089 ## COG1446 Asparaginase + Prom 423906 - 423965 3.7 386 206 Tu 1 . + CDS 424048 - 424386 234 ## BAD_1174 hypothetical protein - Term 424181 - 424236 4.1 387 207 Tu 1 . - CDS 424468 - 425655 1097 ## COG3328 Transposase and inactivated derivatives - Prom 425799 - 425858 2.8 + Prom 425757 - 425816 3.4 388 208 Tu 1 . + CDS 425970 - 426299 177 ## 389 209 Op 1 . + CDS 426494 - 426703 85 ## 390 209 Op 2 . + CDS 426688 - 426915 103 ## gi|154489009|ref|ZP_02029858.1| hypothetical protein BIFADO_02319 + Term 427021 - 427055 1.1 391 210 Op 1 9/0.000 + CDS 427201 - 428001 766 ## COG4584 Transposase and inactivated derivatives 392 210 Op 2 . + CDS 428035 - 428469 277 ## COG1484 DNA replication protein 393 210 Op 3 . + CDS 428484 - 428726 76 ## - Term 428697 - 428731 -0.6 394 211 Tu 1 . - CDS 428813 - 429292 -259 ## 395 212 Tu 1 . + CDS 430610 - 431092 27 ## gi|154489018|ref|ZP_02029867.1| hypothetical protein BIFADO_02328 + Term 431100 - 431140 4.0 396 213 Tu 1 . + CDS 432490 - 432945 -329 ## gi|154489025|ref|ZP_02029874.1| hypothetical protein BIFADO_02335 + Term 433109 - 433142 4.5 397 214 Op 1 13/0.000 - CDS 436522 - 436812 231 ## COG1343 Uncharacterized protein predicted to be involved in DNA repair 398 214 Op 2 12/0.000 - CDS 436880 - 437650 187 ## COG1518 Uncharacterized protein predicted to be involved in DNA repair - Prom 437755 - 437814 2.9 399 214 Op 3 2/0.067 - CDS 437911 - 438588 206 ## COG1468 RecB family exonuclease 400 214 Op 4 . - CDS 438623 - 439468 535 ## COG3649 Uncharacterized protein predicted to be involved in DNA repair - Prom 439502 - 439561 3.1 401 215 Op 1 . - CDS 439706 - 439819 65 ## 402 215 Op 2 . - CDS 439890 - 442307 352 ## COG1203 Predicted helicases - Prom 442339 - 442398 2.8 - Term 442457 - 442521 24.2 403 216 Op 1 . - CDS 442556 - 445861 4438 ## COG0060 Isoleucyl-tRNA synthetase - Term 446151 - 446204 14.5 404 216 Op 2 . - CDS 446239 - 447711 2159 ## COG2211 Na+/melibiose symporter and related transporters - Prom 447773 - 447832 6.0 - Term 447906 - 447958 14.2 405 217 Tu 1 . - CDS 447981 - 449090 676 ## COG1609 Transcriptional regulators - Prom 449116 - 449175 3.9 + Prom 448782 - 448841 3.0 406 218 Tu 1 . + CDS 449082 - 449348 152 ## gi|154489048|ref|ZP_02029897.1| hypothetical protein BIFADO_02358 + Prom 449732 - 449791 2.8 407 219 Tu 1 . + CDS 449842 - 450447 462 ## BAD_1190 hypothetical protein 408 220 Tu 1 . + CDS 450632 - 450853 100 ## - Term 450629 - 450679 3.0 409 221 Op 1 35/0.000 - CDS 450817 - 452895 180 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 410 221 Op 2 4/0.033 - CDS 452910 - 454730 195 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 411 221 Op 3 . - CDS 454731 - 455408 627 ## COG1846 Transcriptional regulators - Prom 455492 - 455551 4.3 - Term 455527 - 455584 14.5 412 222 Tu 1 . - CDS 455636 - 457891 2975 ## COG1472 Beta-glucosidase-related glycosidases - Prom 458022 - 458081 3.2 + Prom 458027 - 458086 2.1 413 223 Op 1 . + CDS 458124 - 458702 870 ## BDP_1658 TetR family transcriptional regulator 414 223 Op 2 . + CDS 458705 - 459904 1164 ## COG1929 Glycerate kinase - Term 460126 - 460162 1.1 415 224 Op 1 . - CDS 460174 - 461628 1631 ## COG0477 Permeases of the major facilitator superfamily 416 224 Op 2 . - CDS 461699 - 462277 395 ## BDP_1666 MarR-type transcriptional regulator - Prom 462309 - 462368 2.4 - Term 462387 - 462433 11.7 417 225 Tu 1 . - CDS 462461 - 463048 801 ## COG2211 Na+/melibiose symporter and related transporters 418 226 Tu 1 . + CDS 463194 - 464534 1756 ## COG0477 Permeases of the major facilitator superfamily + Prom 464920 - 464979 6.0 419 227 Tu 1 . + CDS 465023 - 467353 2940 ## COG1472 Beta-glucosidase-related glycosidases + Term 467366 - 467415 4.4 - Term 467582 - 467634 8.0 420 228 Op 1 . - CDS 467807 - 468442 805 ## BAD_1201 TetR-type transcriptional regulator 421 228 Op 2 2/0.067 - CDS 468453 - 469691 700 ## COG2730 Endoglucanase 422 229 Op 1 2/0.067 - CDS 469912 - 470781 1184 ## COG2730 Endoglucanase 423 229 Op 2 . - CDS 470830 - 471156 614 ## COG2730 Endoglucanase 424 229 Op 3 . - CDS 471186 - 471464 68 ## gi|154489071|ref|ZP_02029920.1| hypothetical protein BIFADO_02381 - Prom 471580 - 471639 4.7 + Prom 471210 - 471269 3.1 425 230 Op 1 . + CDS 471430 - 471501 96 ## 426 230 Op 2 . + CDS 471571 - 472809 694 ## BAD_1199 hypothetical protein 427 230 Op 3 . + CDS 472847 - 474022 536 ## BAD_1200 hypothetical protein - Term 474069 - 474126 21.4 428 231 Tu 1 . - CDS 474213 - 475559 2142 ## COG5520 O-Glycosyl hydrolase + Prom 475535 - 475594 1.9 429 232 Tu 1 . + CDS 475615 - 475776 56 ## 430 233 Tu 1 . - CDS 475695 - 477020 1982 ## COG0477 Permeases of the major facilitator superfamily + Prom 477240 - 477299 3.0 431 234 Tu 1 . + CDS 477436 - 478026 766 ## BAD_1210 TetR-type transcriptional regulator 432 235 Tu 1 . - CDS 478062 - 480188 2684 ## COG1874 Beta-galactosidase - Prom 480236 - 480295 5.1 433 236 Op 1 . - CDS 480333 - 480962 459 ## BAD_1212 TetR-type transcriptional regulator 434 236 Op 2 . - CDS 480999 - 482270 1645 ## COG3572 Gamma-glutamylcysteine synthetase - Prom 482386 - 482445 2.1 435 237 Tu 1 . - CDS 482497 - 487242 6371 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) - Prom 487392 - 487451 1.9 - Term 487377 - 487418 -0.3 436 238 Op 1 12/0.000 - CDS 487454 - 488167 607 ## COG0602 Organic radical activating enzymes 437 238 Op 2 . - CDS 488213 - 490618 3388 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase - Prom 490767 - 490826 4.2 + Prom 490806 - 490865 2.7 438 239 Op 1 . + CDS 490931 - 492211 1134 ## COG1570 Exonuclease VII, large subunit 439 239 Op 2 . + CDS 492215 - 492499 532 ## BLJ_1546 exonuclease VII small subunit + Term 492604 - 492646 -0.9 + TRNA 492637 - 492709 77.2 # Arg CCT 0 0 440 240 Tu 1 . + CDS 492968 - 493159 201 ## BAD_1218 hypothetical protein - Term 493083 - 493116 1.4 441 241 Tu 1 . - CDS 493168 - 494316 1053 ## BAD_1219 hypothetical protein 442 242 Op 1 . - CDS 494425 - 494661 323 ## BAD_1220 membrane-fusion protein 443 242 Op 2 . - CDS 494661 - 495251 915 ## COG1192 ATPases involved in chromosome partitioning - Prom 495293 - 495352 7.1 - 5S_RRNA 495450 - 495565 92.0 # AP009256 [R:1549800..1549916] # 5S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 495649 - 495708 2.7 444 243 Tu 1 . + CDS 495742 - 496470 692 ## BAD_1222 hypothetical protein - Term 496478 - 496543 13.5 445 244 Tu 1 . - CDS 496613 - 497584 1105 ## COG0248 Exopolyphosphatase - Term 497640 - 497679 9.0 446 245 Op 1 . - CDS 497770 - 498975 1471 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 447 245 Op 2 . - CDS 499019 - 499534 446 ## COG3727 DNA G:T-mismatch repair endonuclease - Prom 499612 - 499671 1.8 448 246 Op 1 . + CDS 499656 - 500660 1121 ## COG0673 Predicted dehydrogenases and related proteins + Term 500676 - 500713 6.7 + Prom 500662 - 500721 2.7 449 246 Op 2 1/0.083 + CDS 500749 - 502749 1899 ## COG0210 Superfamily I DNA and RNA helicases 450 247 Op 1 3/0.067 + CDS 502852 - 503328 298 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 451 247 Op 2 . + CDS 503328 - 506495 2789 ## COG1061 DNA or RNA helicases of superfamily II 452 248 Tu 1 . - CDS 506498 - 508228 895 ## SAS0375 hypothetical protein - Prom 508272 - 508331 2.8 - Term 508293 - 508327 1.2 453 249 Op 1 . - CDS 508558 - 508803 106 ## - Term 508810 - 508854 4.0 454 249 Op 2 . - CDS 508893 - 509372 585 ## BDP_1664 argininosuccinate synthase - Prom 509427 - 509486 3.5 455 250 Tu 1 . - CDS 509533 - 511215 1979 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain - Prom 511319 - 511378 4.0 + Prom 511409 - 511468 3.3 456 251 Tu 1 . + CDS 511505 - 512947 1351 ## BDP_1720 hypothetical protein - Term 512935 - 512976 3.0 457 252 Op 1 1/0.083 - CDS 512987 - 514438 647 ## COG0383 Alpha-mannosidase 458 252 Op 2 . - CDS 514429 - 514812 483 ## COG0383 Alpha-mannosidase 459 252 Op 3 . - CDS 514870 - 515652 506 ## BAD_1238 alpha-mannosidase - Prom 515750 - 515809 2.1 + Prom 515587 - 515646 2.0 460 253 Op 1 . + CDS 515730 - 515948 81 ## gi|154489106|ref|ZP_02029955.1| hypothetical protein BIFADO_02418 461 253 Op 2 . + CDS 515890 - 516201 77 ## - 5S_RRNA 516003 - 516119 100.0 # AP009256 [R:1549800..1549916] # 5S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 516469 - 519389 98.0 # AP009256 [R:1550263..1553185] # 23S ribosomal RNA # Bifidobacterium adolescentis ATCC 15703 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. + Prom 519340 - 519399 49.9 462 254 Tu 1 . + CDS 519475 - 519864 118 ## - SSU_RRNA 519889 - 521360 99.0 # EU071509 [D:1..1509] # 16S ribosomal RNA # uncultured Bifidobacterium sp. # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples. 463 255 Tu 1 . + CDS 521391 - 521549 153 ## - Term 521679 - 521720 3.4 464 256 Tu 1 . - CDS 521806 - 523977 1939 ## BAD_1517 transmembrane protein alanine and leucine rich 465 257 Op 1 36/0.000 + CDS 524410 - 525810 1678 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 466 257 Op 2 . + CDS 525807 - 526859 1111 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component + Term 526880 - 526936 20.5 467 258 Tu 1 . - CDS 526829 - 527020 108 ## - Prom 527078 - 527137 2.6 468 259 Tu 1 . - CDS 527392 - 528222 1047 ## COG1418 Predicted HD superfamily hydrolase 469 260 Tu 1 . - CDS 528464 - 529333 1242 ## BAD_1521 hypothetical protein 470 261 Tu 1 . - CDS 529708 - 531888 2645 ## COG3158 K+ transporter - Prom 531942 - 532001 3.7 - Term 531967 - 532011 4.2 471 262 Op 1 . - CDS 532133 - 533089 1171 ## COG0084 Mg-dependent DNase 472 262 Op 2 . - CDS 533182 - 535593 2484 ## COG3534 Alpha-L-arabinofuranosidase - Prom 535764 - 535823 7.0 + Prom 535723 - 535782 3.9 473 263 Tu 1 . + CDS 535815 - 536885 1066 ## COG1609 Transcriptional regulators 474 264 Tu 1 . + CDS 537009 - 538046 1222 ## BAD_1527 endo-1,4-beta-xylanase - Term 538018 - 538050 -0.2 475 265 Tu 1 . - CDS 538077 - 540449 2014 ## COG3345 Alpha-galactosidase 476 266 Tu 1 . - CDS 540671 - 542836 2204 ## COG3533 Uncharacterized protein conserved in bacteria 477 267 Op 1 35/0.000 - CDS 543071 - 544858 2346 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 478 267 Op 2 . - CDS 544880 - 546790 231 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 - Prom 546953 - 547012 4.5 + Prom 546973 - 547032 5.3 479 268 Tu 1 . + CDS 547196 - 548284 892 ## COG0657 Esterase/lipase + Term 548333 - 548381 -0.3 - Term 548278 - 548331 9.7 480 269 Tu 1 . - CDS 548358 - 549839 2083 ## COG0477 Permeases of the major facilitator superfamily - Prom 550049 - 550108 2.0 - Term 550257 - 550294 2.1 481 270 Tu 1 . - CDS 550431 - 552578 2447 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 552611 - 552670 3.8 - Term 552716 - 552787 13.1 482 271 Tu 1 . - CDS 552805 - 554667 2661 ## COG0143 Methionyl-tRNA synthetase + Prom 554607 - 554666 1.8 483 272 Tu 1 . + CDS 554895 - 555449 290 ## BAD_1536 hypothetical protein 484 273 Tu 1 . + CDS 555725 - 555955 80 ## BAD_1537 hypothetical protein 485 274 Tu 1 . - CDS 555925 - 556986 1302 ## COG0313 Predicted methyltransferases - Prom 557105 - 557164 3.7 486 275 Tu 1 . + CDS 557271 - 558140 799 ## COG0657 Esterase/lipase + Term 558182 - 558238 12.3 - Term 558229 - 558288 11.2 487 276 Tu 1 . - CDS 558365 - 558514 63 ## gi|154489140|ref|ZP_02029989.1| hypothetical protein BIFADO_02454 488 277 Tu 1 . + CDS 558744 - 559445 178 ## PROTEIN SUPPORTED gi|154175107|ref|YP_001408238.1| ribosomal protein L22 + Term 559498 - 559547 6.0 489 278 Tu 1 . - CDS 559453 - 559575 84 ## - Prom 559595 - 559654 76.8 + TRNA 559576 - 559651 78.1 # Ala CGC 0 0 + Prom 559922 - 559981 3.5 490 279 Tu 1 . + CDS 560075 - 561316 1186 ## COG1373 Predicted ATPase (AAA+ superfamily) - Term 561316 - 561379 8.8 491 280 Tu 1 . - CDS 561387 - 562109 865 ## COG0637 Predicted phosphatase/phosphohexomutase - Term 562379 - 562417 -0.4 492 281 Tu 1 . - CDS 562473 - 562745 400 ## BDP_2176 hypothetical protein - Prom 562963 - 563022 1.9 - Term 562930 - 562970 4.1 493 282 Op 1 3/0.067 - CDS 563038 - 563574 476 ## COG0789 Predicted transcriptional regulators 494 282 Op 2 2/0.067 - CDS 563652 - 564677 1642 ## COG2214 DnaJ-class molecular chaperone - Prom 564701 - 564760 1.7 495 283 Op 1 29/0.000 - CDS 564852 - 565538 888 ## COG0576 Molecular chaperone GrpE (heat shock protein) 496 283 Op 2 . - CDS 565541 - 567424 2755 ## COG0443 Molecular chaperone - Prom 567524 - 567583 1.9 - Term 567607 - 567666 16.5 497 284 Tu 1 . - CDS 567691 - 569790 2939 ## COG1785 Alkaline phosphatase - Prom 570001 - 570060 1.6 - Term 570029 - 570098 -1.0 498 285 Tu 1 . - CDS 570263 - 571141 723 ## COG0730 Predicted permeases - Prom 571164 - 571223 2.0 499 286 Tu 1 . + CDS 571308 - 571808 337 ## BAD_1550 hypothetical protein 500 287 Op 1 . - CDS 572047 - 573030 1030 ## COG3764 Sortase (surface protein transpeptidase) 501 287 Op 2 . - CDS 573041 - 574078 880 ## BAD_1552 collagen adhesin precursor - Prom 574234 - 574293 2.5 502 288 Tu 1 . - CDS 574353 - 575918 1392 ## SGGBAA2069_c21750 backbone pilus subunit 503 289 Op 1 . - CDS 576041 - 578416 2068 ## BDP_2191 cell surface protein 504 289 Op 2 . - CDS 578471 - 580351 1571 ## BDP_2191 cell surface protein + Prom 580504 - 580563 2.9 505 290 Tu 1 . + CDS 580679 - 580816 110 ## gi|154489161|ref|ZP_02030010.1| hypothetical protein BIFADO_02476 + Term 581058 - 581089 0.0 - Term 580948 - 580983 5.7 506 291 Tu 1 . - CDS 581008 - 582036 1256 ## COG1609 Transcriptional regulators - Term 582058 - 582099 5.6 507 292 Op 1 . - CDS 582157 - 582963 600 ## BAD_1557 putative ABC transport system membrane protein 508 292 Op 2 . - CDS 583042 - 583824 644 ## COG1011 Predicted hydrolase (HAD superfamily) 509 292 Op 3 . - CDS 583923 - 585977 2023 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 510 292 Op 4 20/0.000 - CDS 585996 - 586895 1229 ## COG3833 ABC-type maltose transport systems, permease component 511 292 Op 5 19/0.000 - CDS 586892 - 588160 1611 ## COG1175 ABC-type sugar transport systems, permease components - Prom 588317 - 588376 4.9 - Term 588412 - 588455 -0.6 512 292 Op 6 . - CDS 588537 - 589781 1703 ## COG2182 Maltose-binding periplasmic proteins/domains - Prom 589919 - 589978 5.1 513 293 Tu 1 . + CDS 589965 - 591650 1345 ## COG0366 Glycosidases + Prom 591789 - 591848 4.5 514 294 Tu 1 . + CDS 591937 - 594105 2603 ## COG1640 4-alpha-glucanotransferase + Term 594145 - 594186 10.2 - Term 594133 - 594172 6.0 515 295 Tu 1 . - CDS 594222 - 595970 2026 ## COG0366 Glycosidases + Prom 596233 - 596292 2.2 516 296 Tu 1 . + CDS 596342 - 596944 828 ## BAD_1562 hypothetical protein - Term 596992 - 597046 -0.4 517 297 Op 1 38/0.000 - CDS 597144 - 597986 1152 ## COG0395 ABC-type sugar transport system, permease component 518 297 Op 2 . - CDS 597983 - 598738 975 ## COG1175 ABC-type sugar transport systems, permease components - Prom 598951 - 599010 6.4 519 298 Tu 1 . + CDS 598683 - 598943 85 ## gi|154489177|ref|ZP_02030026.1| hypothetical protein BIFADO_02492 + Prom 599092 - 599151 3.5 520 299 Tu 1 . + CDS 599180 - 600190 930 ## COG1609 Transcriptional regulators + Term 600233 - 600285 15.3 - Term 600219 - 600272 17.7 521 300 Op 1 . - CDS 600382 - 601779 1966 ## COG1653 ABC-type sugar transport system, periplasmic component - Prom 601812 - 601871 2.5 - Term 601965 - 602001 2.0 522 300 Op 2 . - CDS 602040 - 602744 592 ## COG0406 Fructose-2,6-bisphosphatase 523 301 Op 1 . + CDS 602851 - 603219 442 ## BDP_2209 hypothetical protein 524 301 Op 2 . + CDS 603328 - 604107 1061 ## COG0778 Nitroreductase + Term 604152 - 604201 17.1 - Term 604138 - 604189 12.6 525 302 Tu 1 . - CDS 604249 - 604500 237 ## BDP_2217 hypothetical protein Predicted protein(s) >gi|148337400|gb|DS264459.1| GENE 1 782 - 2113 1736 443 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 2 441 1 440 443 338 43.0 1e-92 MMNRIIKTAVCMTAVAAMSVGTLAACGSSDSGSDAKGKVYYLNYKPEINDAWKALAKKYT EKTGVEVKVETAASGTYQQTLKSEFAKSEAPTLFQLSGVAEYQTWKAYTSDMSDTEPYKQ LKDKSMVLKDGDSVGGVPYVVEAYGLIYNKDLLAKYIATDGAKIKSADDIDNFDTLKAVA DDIQAKKDQLGVKGAFTSAGFDSSSDWRFKSLLANNPLYFEFRDDNVTEQPESIKGTYLP QFKQIFDLYLEDSTCPKSQVSSKTGDDANSEFALGEAVFYENGTWAWPDLQKAGVKAESV GMMPIYMGVEGEENQGLDVNSEAYWCINSKASDADKKATKDFLKWVITDQAGIDAISSDM GLTTPFKSFEDVKSDNPLVQAEVAYQDSGKEAVSTRPNGMFPSDEWKNQLGSALLEYAQG TGDWNAVKKAFVDNWKTEYDATH >gi|148337400|gb|DS264459.1| GENE 2 2626 - 3645 1150 339 aa, chain - ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 11 326 10 322 325 418 65.0 1e-117 MSAILEGKPDKNLILVTGRAHPKLAAEVAEQLGIDVLETTAYDFANGEMYVRYTESVRGA DVFVLQSHSNPVNQAIMEQLIMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCRL VFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLIAMPVLVDYIRDRFSNQLDNVAVVSP DAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNQAVANRVVGDVAGKDCVLVDDLIDTAG TIAGACNVLKDAGAKSVTVVATHGVLSGPAVDRLKNCGAREVVLTDTVPIPEEKRWDGLT VLSIAPLLASAIRAVFEDGSVAELFDTYPEHHGQGFLFA >gi|148337400|gb|DS264459.1| GENE 3 3759 - 4505 937 248 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 56 248 8 202 218 258 68.0 9e-69 MTGPKRMRPESAEADPELTVSYVVEPERRMSELSVDRPQSAVTTGRRSARGNWHNRLRIG IMGGTFDPIHNGHLVAASEVSWVYDLDEVIFVPTGRPVFKLDKKVTNAEDRYLMTVIATA SNPKFTVSRVDIDRPGVTYTIDTLRDIRAQYPDAELFFITGADAVAEIMQWKDANKMWEL AHFVAVTRPGYSSPDGVKLPEGKVDTLEIPALAISSTDVRRRAEHGEPVWYLVPDGVVQY IGKHGLYR >gi|148337400|gb|DS264459.1| GENE 4 4502 - 5110 585 202 aa, chain - ## HITS:1 COG:no KEGG:BAD_0900 NR:ns ## KEGG: BAD_0900 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 10 202 1 197 197 297 96.0 2e-79 MSDEVMQDNMQHTMQDNKNPWNADLTDPMLRLRLASERLSIVRYVFLVQVEDGIASADER ASLEYADAVLIGWPETDASDVITPDAAQLDDIDEQMRVMEQHIAKFSAMERDHDIVGMTD TLIRVTERVAGIRSIYQPDFPLPTFAEIRRVVQDEWDEDMDKIDPDNASPTADSIEQETA DADKEQQAEQQADGAQKSGASA >gi|148337400|gb|DS264459.1| GENE 5 5107 - 6420 1503 437 aa, chain - ## HITS:1 COG:CAC3254 KEGG:ns NR:ns ## COG: CAC3254 COG0014 # Protein_GI_number: 15896499 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Clostridium acetobutylicum # 14 437 2 418 418 384 47.0 1e-106 MTNPQNQGTAMNADVFEAVCAMGDAARTAQSQLAQANTEAKNQLLNAIADALDQHADDIA AANTLDMNQAETDGMDAGKLDRLKFDQQRITAAAQGVRHVASLPDPIGEIVRGYHLENGL RLQQVRVPIGVLGMIYEARPNVTVDVASLCIKSGNAVLLRGGHAAEHTNAATLAVIADIL TKHGYDHNMIATVDQYGRDGATAMMEARGHIDVLIPRGGAGLIQAVVRNSKVPVIETGAG NVHIYVDRTGNPDKAIPILINAKTQRVGVCNATEKLLVHKDIAESFLPKAAAALAAAGVE MHADERAYGIIEHAGIANAQLVHAADEDWDTEYLALKIGIKVVDSLDEAIAHINRHSTGH TESIIAEDYSAIEEFTARIDSAVVMVNASTRFTDGGVFGFGAELGISTQKMHARGPMGLR EMTTTKWIGYGTGQVRE >gi|148337400|gb|DS264459.1| GENE 6 6525 - 7832 1495 435 aa, chain - ## HITS:1 COG:Cgl0969 KEGG:ns NR:ns ## COG: Cgl0969 COG0112 # Protein_GI_number: 19552219 # Func_class: E Amino acid transport and metabolism # Function: Glycine/serine hydroxymethyltransferase # Organism: Corynebacterium glutamicum # 7 432 4 429 434 603 70.0 1e-172 MTASPLAQTPNDMFNAPIAEADPEIAEILDAELSRQQNGLEMIASENFVPRAVLQAQGSV LTNKYAEGYPGRRYYGGCEQVDKIETIARERAKSLFGAEYANVQPHSGAQANAAVYQALV KPGDTVLGLALDHGGHLTHGMKINFSGRFYHAEAYGVNPETFRIDPEIIRQRALETHPAM IIGGWSAYPRIEDFKAMKEIADEVGAKFWVDMAHFAGLIAAGLHPSPVPYADVVSSTAHK TLGGPRSGFILAKQEYAKKLNSAVFPGQQGGPLMHVIAGKAVAFKVAATPEFKDRMQRTL DGAKILAERLMADDVKNNGISVLTGGTDVHLVMVDLRNSEMDGKQGEDLLAQCGITINRN TVPFDPRPASVASGLRIGTSALATRGFGPKEYEEVADIIGTALAAGQDADVDALKARVDK LAEDFPLYPGLDQIH >gi|148337400|gb|DS264459.1| GENE 7 8134 - 9621 2152 495 aa, chain + ## HITS:1 COG:CAC0999 KEGG:ns NR:ns ## COG: CAC0999 COG0498 # Protein_GI_number: 15894286 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Clostridium acetobutylicum # 4 488 6 490 496 442 46.0 1e-124 MTTFHSTRSTTDSLTSKQAIRKGIADDGGLFVTDSLGETHVDIASLAGKSYQQIAFDVLS VLLPDYTEAELKECIDEAYGPQWSDEKITPVKPLGDDYVMELFNGPTSAFKDVALQILPR FMARTTPADGDADEKIMIVTATSGDTGKAALAGFADAAGTGITVFYPEGKVSQVQELQMT TQSGSNVNVCAVKGNFDDAQSAVKRIFGDKELAERLADDSHVVLSSANSINVGRLVPQVV YYFSAYAQLLERQVINVGDEVEFVVPTGNFGDILAGYYAKLLGLPVKHLVVASDKNNVLF DFLTSGTYNRQRPFFQTISPSMDILISSNLERMLYYMSDKDTRLISMLMNDLNQWGAYEV PEPMMKKIRSIFGTGWADENQVREMIADCWNKNHYVIDPHTACGYYVMQQMPRDPLTPRV LLSTASPYKFPRVVNESLGLDASGTDFECMDVLAKATGTTAPAALRGLETADVRFDHVVD IDGMEGFVEQAAKAL >gi|148337400|gb|DS264459.1| GENE 8 9743 - 11047 1098 434 aa, chain + ## HITS:1 COG:L157472 KEGG:ns NR:ns ## COG: L157472 COG0477 # Protein_GI_number: 15672136 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 32 400 3 356 393 126 29.0 9e-29 MTAPTIPASESVRQKQPAQQSNQPEQPRRKHDRLITRDMALVMLATFCFMSSNMLANPIV AGYAESLGADGMLMGAVAGSMSFISLFCRPIAGNLSDKTSKRTLVAVGTVLYFAAGLLYY FANSPIMLIMARVINGVGFACCSVCLATWMSLLLPIRHMGAGMGLYGTMNALAMAVGPAL GIRAQKYIGYRLTFLSSLVLAVIMLIATLMVKNGGQPVRKKQTSITENPSTAVDIDGSAS ATKKHRFSIRSILEPRVVPLSLTFMMFAIAYFANQSFIVNYVQSRHLPVSSDLFFMFYAV ALLVLRLGLRDLFDSKGFRFWLTVCSLGMLAMLACMTFLFNDWMLLLAAIFTAVGYGLMS SVTQAQAVVIAGRERSGIANSTYYAGIDLGMSVGPFVGGLVYGRLSAVWFYPVFMLAMPV AWLIYLLCVKRVSR >gi|148337400|gb|DS264459.1| GENE 9 11014 - 11187 70 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDALHEPGWASVGHIAVYGKYDRPQKQLERHALGMVYGRNLAHDANNYRETRFTHNK >gi|148337400|gb|DS264459.1| GENE 10 11247 - 11819 730 190 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_0705 NR:ns ## KEGG: BLLJ_0705 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 190 1 193 193 290 73.0 2e-77 MRVFDFDGTIYDGESLFDLYLFSAKYNPKVLRYIAPVLRYAIKYKLGRATFDQMEYGVGK LCHGYLSELAESLEFEELVNAFWDQNMKRIKPWYEPREDDVILTASFDITVGEACRRLGV QHLVSSTIDGNTLNVNYLNFNTNKPKRFRELYGDNVRVDEFYTDSRFDQPMIDMARRAYM VKGNKIHQVK >gi|148337400|gb|DS264459.1| GENE 11 12018 - 12902 605 294 aa, chain - ## HITS:1 COG:mlr2757 KEGG:ns NR:ns ## COG: mlr2757 COG3177 # Protein_GI_number: 13472455 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 19 230 27 233 263 74 28.0 2e-13 MAERIVERLIRERDTRYGDGIYTTTQIQFAWNSNHMEGSTLTAKQTAQLFATGTYTTDGS EQVNPDDALETRNHFAAFRWILDHADEPVDRDMVCHLHAILKQGTRQVSDSLFNVGGYKT RPNFIGNPVTPTRTALPQDVPEFMDRLFDMCTKLEDEPYQIARVHWTFEKIHPFSDGNGR IGRLIMFKELLRIDALPVLGHDAYRAEYVNGISKFPDEPGWLVDTLLFERDLYRSHVLKT DAEALRYTYHDQWNMAEHRVERDEDLEFAKLIDTKAQPLFDEEYQQRERLLWGE >gi|148337400|gb|DS264459.1| GENE 12 12958 - 13656 646 232 aa, chain - ## HITS:1 COG:no KEGG:BDP_1738 NR:ns ## KEGG: BDP_1738 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 10 220 6 215 231 251 61.0 2e-65 MTELKMFSKPVVLTDFDGVLNAFPDDKLLRRGGVNKVMTWAKPDSPYAKMYNPEKAFHLD SNEKAHTPVGSWRIHWSSELSDAMYALAVDGIVELWWLSTWQPYCSQILDPMLGWDPMLV DVVTWYDPVTKWGRETGKWQTIQRRVRIECEENEPAPIVWIDDDECFEQRAQLLEELQPK APVLMVRPDYRIGISRRQWKLIDTFVHHPEQFDTVTFDMEPTCRIYDIHHGF >gi|148337400|gb|DS264459.1| GENE 13 13902 - 14786 191 294 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163739489|ref|ZP_02146899.1| 50S ribosomal protein L17 [Phaeobacter gallaeciensis BS107] # 101 293 58 242 242 78 29 6e-13 MAVESSQIPEKTVEQIFDERYPLDKWKDSNYSILDKFSMRGRKGFVTGAAGGLGRNAAAA LAQAGADVALVDLPSQEDKLTELAKDMSERFGTNVIALTCDVTDTVQVAELKTQLVEQLG TVDFAFLNAGVNVPGDDQDATEEVWTRTININLNGTYRTGRIAHEIMREHGHGGSLIFTA SLSGHNANYMMGSPTPVNAYGATKAAIMEHSRYLAAALAKDGIRSNTISPGYVWSGIFNG RIDMPGHDAMLEVVPMHRFGTNDEIASTVLFLASDASSYVTGTDIRVDGGYSVF >gi|148337400|gb|DS264459.1| GENE 14 15015 - 15227 86 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488605|ref|ZP_02029454.1| ## NR: gi|154488605|ref|ZP_02029454.1| hypothetical protein BIFADO_01912 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01912 [Bifidobacterium adolescentis L2-32] # 1 70 1 70 70 127 100.0 2e-28 MLGIPVENVAVNEFGGLGGAMCSAVGTGLYKDSQEAFVIAVARMDSGHTNHSITIDHESR TNHTLIDLAV >gi|148337400|gb|DS264459.1| GENE 15 15257 - 15712 -163 151 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCIVLISLMHGRFADLYGGISAMPQVIAQPLSNHDCGQENAHLAAITKPTHRENPKNDTS CHPQPEHHPVLILQQQSLLCCRSLRLQTKQTVSGITPILLIRRFSHAYPACGCSRKEHSH SQEMQECNHPSAHLSCSPVPTSPTPPLITSK >gi|148337400|gb|DS264459.1| GENE 16 15781 - 16122 66 113 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADHSKEKAEWLRKVRDEIRPAYARLLSSGRLILQCDDGSEVAIRFTKGVLPIYVGLNTT WTSIRDVVPGSRISMTTSYEGILRRSAWTTPIDIATGTRHTKSGGVIQNQNWI >gi|148337400|gb|DS264459.1| GENE 17 16591 - 17109 328 172 aa, chain + ## HITS:1 COG:Cgl2438 KEGG:ns NR:ns ## COG: Cgl2438 COG1225 # Protein_GI_number: 19553688 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Corynebacterium glutamicum # 20 169 6 155 158 179 55.0 2e-45 MSDINSPATPTAQDSPASARLEAGLTAPNFTLPSDNGDSITLSALRGQNIVLYFYPAAMT PGCTTEACDFRDNLARLRSRGFTVLGISKDPMDKLVRFRERDHLTFPLLSDADLTVHRLY GAYGEKKLYGKVYEGVIRSTFVIDGDGVIRIARYNVRAKGHVDSLLRALDKR >gi|148337400|gb|DS264459.1| GENE 18 17238 - 18425 1092 395 aa, chain + ## HITS:1 COG:SMc01530 KEGG:ns NR:ns ## COG: SMc01530 COG3328 # Protein_GI_number: 15966161 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 24 390 26 389 398 219 35.0 8e-57 MPDSNIIQIDQNLFETKLDRLVTEKMPQILNAMLDAEADEITGAARYERKEGRKAYRAGH YERTLTAKAGRLELRVPKLKGAVFESAVIERYRRRESSVEEALMEMYLAGVSTRQVDDIS KLLWGDRMPSQTLSDKLKRVYDDIDRWRTRPLESEYPYVFMDGVWHKRSWGGSVENVSVL VAIGVNAEGHREVIGVTEGMREDAASWEQFIRSMIERGLKGVRLVVGDRCAGLVSTVNSM LPRAKYQRCMVHFMRNVLSKVPPNHRDWASAALKAIFAMESRESALAKAGTVAAEMESRK LKAAAGCLREGIGETTAYLLPEFPTEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGNSA LMLICARIRYVTANEWSTRRYLDMSRLDDNLQEAN >gi|148337400|gb|DS264459.1| GENE 19 18592 - 18762 83 56 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488611|ref|ZP_02029460.1| ## NR: gi|154488611|ref|ZP_02029460.1| hypothetical protein BIFADO_01918 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01918 [Bifidobacterium adolescentis L2-32] # 1 56 1 56 56 110 100.0 4e-23 MCHDNHRDTGSRDLGNGVIDRKPLPEYATPFGEFMTASARGATRFSVLLRDRAFPI >gi|148337400|gb|DS264459.1| GENE 20 19153 - 20595 1127 480 aa, chain + ## HITS:1 COG:no KEGG:Acid345_4266 NR:ns ## KEGG: Acid345_4266 # Name: not_defined # Def: hypothetical protein # Organism: A.bacterium # Pathway: not_defined # 1 476 47 517 529 292 37.0 3e-77 MRSVGYSLNTAVADIIDNSIAAHTKTISIRYFDHGEDPYVAIIDDGDGMDYETAVNAMKL AGTNPNAKRNANDLGRFGLGLKTASLSQARSVMLSTVQHGRQNTLRWDLDHVARTREWDL ETLDEEQTNLELPRKVRDLMPSTHGTCVLWRNLDRLGNVAGDSLQDIDQAMLELSGYLGL VFHRFLHPYPEDEIERISITVNDEPVPERDPFLVNNLATQRQRMQRIPGTDATLCGYTLP YQNKLTMEDRGLLDLKQEKGHTLFDTQGFYIYRAYRLITWGSWFRLLTRKEATKLSRVQV DIPNNMDDEWTLDIKKSQATPPKTIRDAMKRYVEKLAAPSRRTQQFRGRKTSNDPEARIW DVISDRDGSFRYEINTDNPYVKGFIDNLSREQRRDFSGMIKVFAAAFPYNDVQSRLSVDE HGAENGLTDDEIRECAQDMWMLANQLKHMSASAFVEKYKSKEPFSLCQNAEEILMEVSHA >gi|148337400|gb|DS264459.1| GENE 21 20588 - 23320 1941 910 aa, chain + ## HITS:1 COG:no KEGG:Rumal_0705 NR:ns ## KEGG: Rumal_0705 # Name: not_defined # Def: putative endonuclease, Z1 domain # Organism: R.albus # Pathway: not_defined # 3 714 2 723 927 338 33.0 6e-91 MRNKWEKVKAKVKLVLMVDDDDDQAPSEQDIEDALKILVSRKPELLEDSEGYNRTFRELR NELVPKIDEGITLTDQNSAWKPWLSDMQSSDTWETPRSDSYYQYLVMDKNSSYSTLDYTA NEIVKLLADPRRDQPAVSRKGLILGDVQSGKTRTYIALMNKAADCGYRLIIVLTSDNENL RQQTQERIDTDFIGWQDGIRVGIGKYQQNIAHPSQLTNENDFVAAYDKAFHSFPRPTWNS AAPCVAVIKKNASILSKFNKWFDSPEFDKDLPVLIIDDESDYASVNSAKLDDSPTRINSL IRDLCQISSRTSYVAVTATPFANIFIDDADESDLFPQDFIHILKSPDAYIGAKKLFGDMD SVPEDSSCVREIDEGELESWLPVSHGKNYDIVDPELDDQVKHAVCTFINACALRPNAEDE QQSMLIHMSRFTDVQRQIADRVSGYLRQVENAVRFHADGDPRIDDLQEAFESEYYTSTDI SWGMMFLRIRRLVQSSRLRVRLVNSDSDDWSLRNDVPPDLTSNECTIFIGGNQLSRGMTL SGLICSVFYRRVTASDTLLQMGRWFGYRPNYANLQRIWLLPESVLDYRYSCSIVEELKES ASRMKHLGMTPKQFGLAIRKNPNKGVRITNASKMRNAVEGIGYQEFDMAGEIIESIKLDV DMKRRNQNDEAFMKLLGVCNAPQVISSVSPLVETQVFQNVPAKAVVDFLSQYRSGYRDTF FGPTLMTYRDQEIEMNTSMAEQYACTQLSENPDMTWNIGFINGNGNEVEGVNFHWTQVKR KCTFRDNRQFQINGDKMRLGSKNDALKIAACTYQLPIDQKNSSERQYYLTKYFGDHPSLL FYRICVKNFDGHQGLSPQEGPGMLGVKLIVPVDEVNVNKHLGKTVYMYNTVAQRREFAEL SRKAEEYGDD >gi|148337400|gb|DS264459.1| GENE 22 23459 - 24310 288 283 aa, chain + ## HITS:1 COG:no KEGG:Acid345_4268 NR:ns ## KEGG: Acid345_4268 # Name: not_defined # Def: hypothetical protein # Organism: A.bacterium # Pathway: not_defined # 1 261 45 297 318 85 26.0 3e-15 MLLTERQPKTLNRLEAIDVRVSMRGNARPREKWALTFTLQDWSLIHAFGEICLAFANRIA DAPSEDAALRQIYATVDQWQRLLKISRNSDMAKLLRGTFGELVAAMEITRQTGKTIEEVC VAWQGPYAAPQDFQFPDEKTAWEVKTIHKTAESITISSPEQLDTSDRSIKLMVLEIQETK DMEHGLTLPQLVDRLREKAADPSTVTEYVDDGLASLGLNLYSGLVSQTAFRIGTISTYRV EDGFPRIETGTIPAGVSNLTYHISRSNLTPYLQSESTSAMVEE >gi|148337400|gb|DS264459.1| GENE 23 24310 - 26730 1376 806 aa, chain + ## HITS:1 COG:no KEGG:RPE_3249 NR:ns ## KEGG: RPE_3249 # Name: not_defined # Def: hypothetical protein # Organism: R.palustris_BisA53 # Pathway: not_defined # 5 590 6 581 687 324 33.0 9e-87 MEEIEEYRHDLWNEVLELARDRDIYDQEAFFETACEILRDSEAITAYHPAYCRYLMGTNK ALAIDGYDQDAFELDESIVVIVCDDKLTMNDQNAPQTIQAAECKKYFNAMQRFFVAAWNG SYQAQAEESSETYEFAQFIKQNRAGIRRARFYFITDREYTGRSDPEAIQIDQYKKEKERQ HISWEYHTWDIRRLMEASHATGLAEHMSIELPGGIATVKAPDDMEDMDTYLLFVTGDVLS GWYKKYGSKLMEANVRSFLSMRGKVNKGIRTTICNQPDRFVAYNNGLTATATHVETDGQG RIIRLDDLQIVNGGQTTASIFYTGQKDKTDLSRVIVPVKLVVVHEDMARELVPYISRYTN SQNKVAEADFSSNSEYQIKLEQLSKQALTPPLPGTIQTHWYYERARGQYDSEKNRRDAAS RKAFEKANPSKQRIKMVDAPKYLVCWDGQPQVASLGAQKCFAKFVNQQSANKSAADELNV DFYKQLVCKRIIFDTVYKHIKKAEWFLGAYQANVAEYAVAKYSLDLRRAGLSCDFDAIWR RQSIDAHMLGCLLKAGEQASEVLNDPRRPVQNVSEWAKKDQCWNNLKGKMTCLDAADVEI VMEKPKHAATKRVVKEDEVSAAPEPRHKASNEAVEELPTDNVLVSDWHALTPKSLERLIA FATPKHYLSPKSKSSLETLISGDDLPINENALNNLLKRCLDAGFPLRELQAKPQVPLRPG IDITSEDASVDDRRDFLMSIPEQNWQTIIQWGQKRYMINQEMMAALARLSEGLQLTDRQT VLLWRLGNDMVKRGFPASLFKPRDQR >gi|148337400|gb|DS264459.1| GENE 24 26721 - 28238 680 505 aa, chain - ## HITS:1 COG:MTH495 KEGG:ns NR:ns ## COG: MTH495 COG0270 # Protein_GI_number: 15678523 # Func_class: L Replication, recombination and repair # Function: Site-specific DNA methylase # Organism: Methanothermobacter thermautotrophicus # 3 490 1 403 413 193 33.0 7e-49 MPMDPIPVIDLFAGPGGMSEGFSSLRDENDEPVFRSIMSIEMERTAHATLRLRAFARRLM DADGRLPQDYIDYLGTPSSENLERLKDSHPEEWAAAEAEAIQGTLKEGDDEFVEMAKKRL QGYDGPLVLIGGPPCQAYSLVGRARRTHDKDRLEKDVKQTLYKCYLRFIEVLRPTAFVME NVKGLLSARNYGEGVFGHIRADMEALGYELHSMVVKDPERPHDFIVRADEFGVPQARHRV ILFGTRSGCGQGAPGVMTPRPVITVDQVLGEMPRIRSGFSSRVHDKLDWKEYVRKAAEKL MLTPEGSALGPSLEPVMEGKHLPSAQHADGIGAEDRNPLSDWYRGHLAGSGVLPEHVARN HMDSDLDRYLFCAAYAQEHKTCAKLYDFPKYLLPNHKNAEGAVEGKEVVFADRFHVQLSD QPSTTVTSHISKDGHYFIHPDPSQCRSLTVREAARLQTFPDDYFFMGNRTDQYRQVGNAV PPLLAQQMAQVVADWIDEPSVGYYR >gi|148337400|gb|DS264459.1| GENE 25 28503 - 30527 757 674 aa, chain - ## HITS:1 COG:Cj0945c KEGG:ns NR:ns ## COG: Cj0945c COG0507 # Protein_GI_number: 15792274 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Campylobacter jejuni # 74 459 13 416 447 135 27.0 3e-31 MELKLADNPTIEIVSEKAFLDALEKTNADALETLSEKQEEYKRIWSTARSVGRDFHGLTD GQKKAFDLVKEGKNVYLTGLAGTGKSYIVERIIEWAQTSGLNVITCAPTGIAALNVGGST VHRVLCIRPGRTLEKDPHPFVPTDSPLPDCDLLILDEVSMCRMDLFDYLSAVLKIAGKIR KQKGKGLCQLLVVGDFCQLPPVITNEERRFLEEKYGYDVGEAFAFQSSEWAFWNFEEVEL CEAIRQRDAHFVAALNACRFGDKNGARWIEQHALVNPLPDSIILCSTNAQARDENMQRLN ALKDEEMTFVAHVTGEVLKSDMPTDEELSLKPGARVMALVNNSEDTFMNGALGTVINCDG PGALVRFDGIEATFVQSFEWKITKPVLINGRIEKEVVGTFEQIPLKLAWAITIHKSQGQT FDRAIIYPDCWDFGQLYTALSRLTGIHGLYLAHHINDNFLVTSKEVLDFLNGKRKTDDGR RAKTVQTRHATRRVSNKKDITPDKNIDGNMDDFDIRWGTVPDDVELEDIGDDMDLLLQSA ELIVTSQFGSTSMLQRKLCVGFAKAGRLMDLLESRGVVGPSEGCKAREVLVQPQDLPQVL AFIKGETAMPVSKPASDPWAAMDPWEAEDPWDVEEAPKPGVTQERFKSLNEEVEKKKTSK GGLFARIKRLFGAR >gi|148337400|gb|DS264459.1| GENE 26 30518 - 30739 232 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488618|ref|ZP_02029467.1| ## NR: gi|154488618|ref|ZP_02029467.1| hypothetical protein BIFADO_01925 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01925 [Bifidobacterium adolescentis L2-32] # 11 73 1 63 63 108 98.0 1e-22 MTPVFSGKRFVLSGDFEMYGGKSTAAEMIEEAGGSVTKTGPSKRINYVIVGDRGNAAWAF GSYGTKVKSMPWN >gi|148337400|gb|DS264459.1| GENE 27 30723 - 30977 215 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488620|ref|ZP_02029469.1| ## NR: gi|154488620|ref|ZP_02029469.1| hypothetical protein BIFADO_01927 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01927 [Bifidobacterium adolescentis L2-32] # 1 84 1 84 84 152 100.0 1e-35 MGEFIKLISDAGDNPRFAVADAKQLLKLYEEQYAYLGDTLVNQIAKLLGGISDDAVVGEE KGGKIPVGRQDAQKPGIELHDSGF >gi|148337400|gb|DS264459.1| GENE 28 31341 - 31430 80 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLKGPKRLVQPEPVDHAWWDDGSGVYSIG >gi|148337400|gb|DS264459.1| GENE 29 31478 - 32035 687 185 aa, chain + ## HITS:1 COG:FN0030 KEGG:ns NR:ns ## COG: FN0030 COG3467 # Protein_GI_number: 19703382 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Fusobacterium nucleatum # 18 175 1 155 158 100 31.0 2e-21 MVTRRNDERTVAGRHRMMRRADREVTEPQQVEAIIATCKIVSLAYTDAEGITIVPLNFGY VFDTESNHLTLYFHGSATGRKMDAVKAAGNALPVAFEMATDCEVVEGRTLCNWGEAFKSI VGNGTASIIDNLDEARQGLALLMKQQAGMEHVEFTDQQVHAVTVWKVEADYLTAKVREKP QPHMH >gi|148337400|gb|DS264459.1| GENE 30 32085 - 32213 65 42 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488623|ref|ZP_02029472.1| ## NR: gi|154488623|ref|ZP_02029472.1| hypothetical protein BIFADO_01930 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01930 [Bifidobacterium adolescentis L2-32] # 1 42 1 42 42 72 100.0 1e-11 MVNPNRQVVVDANALLGRNPISAFDGTKLDGVISRTIIGGRP >gi|148337400|gb|DS264459.1| GENE 31 32620 - 33123 238 167 aa, chain + ## HITS:1 COG:all0706 KEGG:ns NR:ns ## COG: all0706 COG2421 # Protein_GI_number: 17228201 # Func_class: C Energy production and conversion # Function: Predicted acetamidase/formamidase # Organism: Nostoc sp. PCC 7120 # 1 159 150 300 328 103 37.0 1e-22 MHPFLGIMDVTTASNQRPSSIPPADYGGNIDLRNLTVESTLFLPVQIEGAGLYIGNPHFT QGNGEVSLTALEASLRATLRVQVVPTAEAKRLFGRTDLPFAISHGTLIPMGFSSTLDDAL SQSVEHAINMIAAMFEMPRQQVYLLLSAAIDFNVTQVVDITPKAFTV >gi|148337400|gb|DS264459.1| GENE 32 33311 - 33442 60 43 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488626|ref|ZP_02029475.1| ## NR: gi|154488626|ref|ZP_02029475.1| hypothetical protein BIFADO_01933 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03796 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFADO_01933 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03796 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 43 1 43 43 73 100.0 5e-12 MQQDSNTTQATDRAETDALSFGAKKIAIMIGVGLIAGSLHCLC >gi|148337400|gb|DS264459.1| GENE 33 33752 - 34129 444 125 aa, chain + ## HITS:1 COG:SA1748 KEGG:ns NR:ns ## COG: SA1748 COG1725 # Protein_GI_number: 15927508 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 125 1 125 126 94 42.0 7e-20 MKLIISSVSGEPIYEQIKNQIRSAIMSGELTAGEALPSLRKLAKELRVSVLTVTRAYNEL ADEGLVENVQGKGTFVMERGNELMKERARERIMDKLREVSIEAKAADISLLDLLGMFEKA YREQS >gi|148337400|gb|DS264459.1| GENE 34 34126 - 35058 978 310 aa, chain + ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 29 298 17 286 288 204 38.0 1e-52 MNDSSLPQGTRPTLALSVTGLTKHYDSGFTLDDVTFDLPSGYIMGLVGPNGAGKSTLIKL ILNMTARDAGRIEVLGLDAMADEERAKEQLGVVLDSSYFIEYMTVDAVERTSSPMYPLWD HNLFDAYLRRFGLGRNKKIKDLSRGMQMKLMLAVALSHDAKLLILDEPTSGLDVLSRDEL MDILSDYVADGGHSVIFSTHITADLERCADFLAYITNGMLYYSGPKDEFEDAFRLVKGGP DELTDGLQRAMVGIRTYATGFDALVRTQDIPHIGGTDGLLTQHASIEDVIRLTNAAAHTA IGNTNKGDVR >gi|148337400|gb|DS264459.1| GENE 35 35055 - 35771 666 238 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488629|ref|ZP_02029478.1| ## NR: gi|154488629|ref|ZP_02029478.1| hypothetical protein BIFADO_01936 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03799 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFADO_01936 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFPSEUDO_03799 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 238 1 238 238 411 100.0 1e-113 MNTTANADAMTAILRQISLDWNRTISYGRSYIAIFFAYVPGFTCLMAATGSTLDSVAGAA IGGAASGFLMLNITLFSYEQMNNHHWMNGIVPINRNHQILGRFAFLIACDLVAGLEVAAS IACAGTIMHEPVKVTDAIDFAAMTVLTLVLLNAIVQPFLYRFSPYRAMAAIILSIGVIVG TVIGLRKALPEFEKTVEQLAEAISRHQAIALATFLIIDVLALVFSSKISLHIYGSKDI >gi|148337400|gb|DS264459.1| GENE 36 35867 - 36526 726 219 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 7 194 6 192 215 176 48.0 3e-44 MAGNQGKGAIFDLDGTLLDSMGVWDQVDIDFLSKRGIDVPDDYMTKVAAMQFRQIAEYTI ARFSLTDTPEELMDEWDHMARVMYATVVEAKPYAREYLAQLKESGAKLAVATSLPPMLRE PAMKHVGIFDYFDEVVSVDDAGDVGKDQPDVYLLAASRLGVEPGECTVFEDLLIGMRSAK SVGMKVWAMHDDSSDADWPAICGLADGVMFDFHDAPAVL >gi|148337400|gb|DS264459.1| GENE 37 36559 - 38265 1421 568 aa, chain - ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 565 1 573 593 288 37.0 2e-77 MLEELEIHNLGPIRSALIAPAGGMTAITGETGAGKSMLLSAIRLISGGPSDGGRVSVGAS EAWAQGVFEVASSPAAVAAAHEAGFEPEDGELFLSRKVPASGRSRSMLSGRSVPRSVLGS IAAELVTIHGQADQLRIASSARQREFLDRYAGDDVALVAYGKAWNALRAMDERLERLSSQ ESSMRQQADYLRESIERINRIDPQPGEMAELRARRDRIENAAEIAEGVNRALSALDASQV VDDVESSSATDLIDRASQALRAIHVDGVFSELADRLDSISTDLSDVVFTLSGEVDNDLGM EDLDAINGRIHELDELVRRWGPELSDVIAWRDQAVFDLEDLDASPEKVSQLQAEREKLFG EALKAARAVSKRRAAAAKELAAKVTAELESLAMSGSKLEIRVSEREHLDASGVDGIDFLF TPFPGSPQMPMGKSASGGELSRLMLALELVAAEKHVVAGGSVPPMTFIFDEVDAGVGGKT AVELGARLAKLAQSAQVIVVTHLPQVASWADEQYVVAKGEMDDGSIATTINQVRGEARVH EIARMLSGSESEASLEHAEELLKSSVLD >gi|148337400|gb|DS264459.1| GENE 38 38274 - 39212 679 312 aa, chain - ## HITS:1 COG:Cgl1379 KEGG:ns NR:ns ## COG: Cgl1379 COG0061 # Protein_GI_number: 19552629 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 55 289 72 305 320 232 49.0 6e-61 MFGTRHAVVVTHSRLRESGTVVEEAVGQLTQAGFEVSIIDNIEAPDFGKQLPVVSERTEI VVVLGGDGTILRAAELVHCTSVPILGVNLGHVGFLAEFESFQMSEAIRRVAEHDYSIDER MIAHVDVWLPGASEPIEDWALNDITLERADRGKMVELSIRVDDVEMSSFGCDGVIVSTPT GSTAYAFSAGGPIMWPNVKALQLVPLAAHALFARPLIIGSGSTFAIDILEDSTSDGWICC DGRRQCALPRGTRVEVRESKSTLRLARLSGVPFTNRLVTKFDLPVVGWREQARKTGGVHH GHVFPEDKETNE >gi|148337400|gb|DS264459.1| GENE 39 39481 - 40944 1557 487 aa, chain + ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 51 487 17 445 445 208 34.0 2e-53 MSNLVFDESSSNREASHGYAWWFSGDTFEKAMAEDRKPRKRGLTRRLVNHPGRLTIFYFL TLAALSTTLLMTPIATPKDETTTFTTAFFTAVSAISTCGISIVNSTTHWTTFGQGVLIFA VQMGGLGVMTFASLIALAVNHHLKATQRMLTANELGTTKLGEIKGVLTVVITTAFVIEGI TFVALFPGLYKVNHGNVRHTLWESLFFAVMAYNNAGFTPDGAGLHVNNWAVGLPILASAF CGTLGFPVLLNLMRSWRMRRPPKRWSLHTKLTLTTTFCIVIASFTWFLLMEWNNKLLFAG NGIEPRLWHAMVAAVMPRSSGFDLSWMPGVSDATKVFLSIVMFIGGGSTSTAGGIRVTTF AVTLLTCRAAFTGRHDINAFHRRIHTQAVMTAVAVSTACLMLVTVVSMALMIITGCSLCD ALFDTCSAFGLGGYSVGVASESSPTVLYILAATMFIGRLGPLTIAYAISRPHNLEAVRYP TEQIVVG >gi|148337400|gb|DS264459.1| GENE 40 41032 - 41685 837 217 aa, chain + ## HITS:1 COG:BH0597 KEGG:ns NR:ns ## COG: BH0597 COG0569 # Protein_GI_number: 15613160 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Bacillus halodurans # 10 216 7 215 218 129 37.0 5e-30 MANNTRSVLVVGLGRFGSSVATTLDMMGQDVLAVDKDGELVNRWSSQIPTVQADMTDVMA LEQINASDFDTAVVAIGDSVEASVITAGNLLDAGISDIWAKSVSKEHARILQRIGARHII NAETDAGKRVGHLVSGNYLDYIELEGAYNVVKIHTPAHVVGYTIEDARVHERFGITVVGI KSPGKEFEYGSKELIMHRNDELIIMGKQNQIDRFLRS >gi|148337400|gb|DS264459.1| GENE 41 41803 - 42564 756 253 aa, chain - ## HITS:1 COG:TM1576 KEGG:ns NR:ns ## COG: TM1576 COG1189 # Protein_GI_number: 15644324 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Thermotoga maritima # 11 249 6 239 267 172 45.0 5e-43 MRNSDSTQVVRLDVALLERGLTDSRSKAQRLIADGKVSVNGVTVTKASAKVGGDDVIAAD RGDGYVSRGAYKLVGAFERFADVGLRSAQGLRCLDIGASTGGFCDVLLRNDAAQVIALDV GHGQLDPKIAHDDRIIEMSGVNIRDVYAEDLPYRPEMIVSDVSFISLTYVIPVIARIAAP QAQIVLLVKPQFEVGKGNLGKNGIVESQELREQALSSVVACAERNGLDVRATTVSPIEGT HGNIEYLLYAVMQ >gi|148337400|gb|DS264459.1| GENE 42 42596 - 43630 993 344 aa, chain - ## HITS:1 COG:Cgl1376 KEGG:ns NR:ns ## COG: Cgl1376 COG0647 # Protein_GI_number: 19552626 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 16 333 7 313 328 192 40.0 9e-49 MARMLKSTNQPLSEAYSLALLDLDGVVYRGKNPVEHAAKNIRKAESLGMAVEYTTNNSSR LQAVVADQLKGFDLDVESWQVITSSVVAARMVARAVPEGSKVFVLGAQHLREEVAKQGLE VVDSAEAQPVAAIQGWYPDMSWNEMAQIAYAVEHGATYFVTNRDLTIPRELGIAPGCGSM IMAVINATGVEPVSSAGKPESAMYDEARILAAHDDGEPVDKQQCLAIGDRLDTDIEAGNR GGYDSLAVLTGVTDPRELMFAPAYLRPTYIAKDLRGLNEPAPEVVHDEGAWLCRDAKARV DGDRLYVTDITSVDGLRAACCAMWAAADSGRDVSGVIVPEFRIS >gi|148337400|gb|DS264459.1| GENE 43 43637 - 45400 2020 587 aa, chain - ## HITS:1 COG:no KEGG:BAD_0913 NR:ns ## KEGG: BAD_0913 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 581 1 579 579 583 79.0 1e-165 MAEEQRGSRGKSYGNHKSYGSGKPGDRGGKGFKPRGNGGKSYGHKSGGFHNDDHKGGYRK GNGGNFRRDRDFRRDGEGEGQERRFHNGPRKFNRDGERRDDHRDYRGGRGDNPRYQRDGE RSGFRRDDRRDGNRKDFHRDGDRRNFRREDGDRRNFHRDNDRRDFHRDGDRRNFRRDDHR GNDRRDGGRRNFRDGERKEFRRDDQRRDFHKDRDQQQREERREFTREEKMAYREEKRGEY MAKPRRNSDGTVSFPSQNPYTHRRPDEPKMPKGIEWRMLTTDDRERLRGLSKEHAENIGL HILAAYTLEESNPELALEHAKWVARQASRIDFARETLAFVAYRQGDYKLALREFRTAFRM NGFLDYLPFIADCERGVGEPKKAIEVAVSDDAKYLRGEAKAEMFLVYAGALGDLKMWDKA IEIVHTLGRSKGLAGEYRMRAVQAEQYFLEEAGRTDEAIALDRLLDKLELQYADVEDDET SDDLVVEYDMQELNDELMDVLGISEDDAQYAPEDPENEEDESEAIDENGETNDETQLEAE ETEAGAESDDEPAEADDAAEDDADDDGEAEEAEESSDASSESSEDNK >gi|148337400|gb|DS264459.1| GENE 44 45485 - 46792 656 435 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 22 404 16 388 418 257 39 7e-67 MAHVIDFKEAGFESVLDELEWRGLISQSTDRDRLAEALNGDPISYYCGFDPTAASLHIGN LVQLINMRHLQAAGHHPIALVGGATGLIGDPRQSGERTLNPKDVVAGWAERLKAQIGGIL EVEGSNPVRFVSNYDWTASMNVIDFLRDVGKNFRLGTMLAKDTVARRLNSEDGISFTEFS YQVLQGNDFLHLFDEYHCVLELGGSDQWGNLTSGLDLIHKVRGVDVNVFTSPIITDAQGK KFGKSEGNAVWLDGTMLSPYKFYQFWFNRPDSEMENLLKVFTFLPKAEIERLVEESKTNP GAREAQRTLAWEVTSLVHGEEATRQAIEAAGALFGRGGDLAGVDESTLEAALDGVKIDGE FAKAAVGDRVAEAGMKAGLFKSISEARKTIKAGGVYLNNARVEDEEQVLNENDFLHGRFA LIRRGKKALGVVENV >gi|148337400|gb|DS264459.1| GENE 45 46963 - 48807 1589 614 aa, chain + ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 422 578 6 161 270 94 31.0 6e-19 MDRKGMKVAAKKAQRQHYWMIVAICLFASVFGVAYTSSTLSVSTNISISTPQTEDSTQSN DMYDVLQDLAVGNENDAREKVKQNQEQIVNNDTDATFGRRRGVIASLLNSFASGSMVIAV ADAINSVTHNGGVSIAVPVILSLAVYIFVWLFIQETYRIVMARMLLEGRSYNKLPASRFF YPIHTRKWPRMAWTMFVENVFLFLWSLTIVGFFIKQYSYRMVPYIVAENPNIEALDAIRL SRRMMKGHKWECFVADCSFLGWYLLNLITFGLSGIFYSNGYNAAFFAEYYVYVRSMAKTT GIAGSEMLNDEYLYFKAEPQTLHTTYADVAQSVAQLEQNLVPAPKPHGFTGFLSEWLGIR ILHASAVNRYEEYRENLHQMQIGENILNGSIYPGRLAPAPMPFKFRESRTISADRSYSLV NLIMMFFIFCFVGWVWEVSLAFISEDMFVNRGTLHGPWLPIYGTGGVIILVLLKKLREKP ALEFVAAMVLCGCLEYFSSWYLEMTHDGQRWWDYTGYFLNINGRICAEGLLTFGLGGLAI VYLLAPALDNLLSRIDARKLGIVAAVLLVLYCADQVYSAQHPNVGAGITDYKGSDTSLEA PTPYEIRKRSDGLS >gi|148337400|gb|DS264459.1| GENE 46 48905 - 49708 585 267 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 4 267 3 268 270 128 29.0 1e-29 MLMLEYLFLWFLFYSFAGWVYESILVSVSERRLVNRGFLNGPICPIYGCGAVLAIVLLHD LHNPFAVFLISSIGACMLEYVTSWGMEKLFHARWWDYSHRRFNIQGRICLLGAIVFGLLG VLITDVIQPEVNRITQMIPLPVVHWMCVIFMAFIVADTIITVLGIIDLADNLAKFSETVQ AYAEKAGDSLQWGKDIFRDKFRDKVQDKVQDWSDSSQEILANMQATAASILNKQQRRMIN AFPRLRFTDSIKYSKIIETLHEMLRRK >gi|148337400|gb|DS264459.1| GENE 47 49721 - 50158 167 145 aa, chain - ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 9 130 43 159 173 94 45.0 9e-20 MQIERVCYQHGVVTTFAHSIRVACLAVWIADRLRLWHRVDLHSLIRAALLHDYFLYDWHA HDGGRHRMHGFTHGGTAMRNAVRDFHLNRVERDSIENHMFPLTPIPPRYLEGYLVTVADK ISATRETVSLERFYKPKVNMHTSGK >gi|148337400|gb|DS264459.1| GENE 48 50263 - 51750 1667 495 aa, chain - ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 12 463 10 456 477 477 57.0 1e-134 MTESTTNGEHLALWGGRFKSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLL TADELQRMEDALDELQRRVDSGAFAPIEDDEDEATALERGLLQIAGDELGGKLRAGRSRN DQIAALIRMWLRRHSRVIAKMLLGLAATLTEQAEKAGRTVMPGRTHMQHAQPVLLAHQLM AHVWPLLRDVERLADWDKRIDASPYGSGALAGNTLGLEPVAVARELGFSKVTANSIDGTA SRDLVAEFAFIAAMAGVDISRLSEEIIIWNTQEFAFVRLDDAYSTGSSIMPQKKNPDIAE LARGKSGRLIGDLAGLLTTLKGLPTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMVGTMV FNKERLEAEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKIAEDRGQELWDLADDDF IEVFKEFLPADKAPEVREVLSTEGSVSARNGKGGTSPLRVREQIVSAKTAIEQLRAFANS VSDGPAYKTPESLLK >gi|148337400|gb|DS264459.1| GENE 49 51860 - 53098 1804 412 aa, chain - ## HITS:1 COG:Cgl1367 KEGG:ns NR:ns ## COG: Cgl1367 COG0137 # Protein_GI_number: 19552617 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Corynebacterium glutamicum # 5 402 3 400 401 528 63.0 1e-150 MSDQNRLVLAYSGGLDTSVAISYLKERTGKDVVAVSLDVGQGGESLETIKQRALACGAVE AYVVDARDEFANEYCMKALKANALYEGVYPLVSAISRPLISKHLVRAAHQFGADTISHGC TGKGNDQVRFEVSISSIDPTLKAISPIRDLSLTRDVEIAFAKEHKLPIVQTEKSPFSIDQ NVWGRAIETGFLEDPWNGPTKDCYSYTDDPAFPPVEDEVVIEFKQGIPVKIDGHDVTPLQ AIEEMNRRAGAQGIGRIDLIEDRLVGIKSRELYEAPGAIALITAHQELENCCLEREQHRI KRDIDKRWAELVYDAQWFSPATQSLNAFIEDTQKYVSGEIRMILHGGRAVVTGRRSDTSL YDYNLATYDSGDSFDQKSSNGFIDIYGLPSRVAAARDVKFGNGIEVPENSVE >gi|148337400|gb|DS264459.1| GENE 50 53194 - 53712 482 172 aa, chain - ## HITS:1 COG:Cgl1366 KEGG:ns NR:ns ## COG: Cgl1366 COG1438 # Protein_GI_number: 19552616 # Func_class: K Transcription # Function: Arginine repressor # Organism: Corynebacterium glutamicum # 13 165 2 151 156 103 45.0 1e-22 MTDHTPALQRPATRTARLSAIEQALLTRIVTSQSQLSQILADQGIEVTQATLSRDLDEIH ATKTRLADGTVAYAVGKQNIDEHPASNPDAKTEQQISRVLSGLVTSVAAARNLVVVHTPS GAAQYVASVIDKQPIEGVLGTIAGDDTVMVICSEDDVAKRRAQWLLDVASKA >gi|148337400|gb|DS264459.1| GENE 51 53712 - 54680 1172 322 aa, chain - ## HITS:1 COG:MT1694 KEGG:ns NR:ns ## COG: MT1694 COG0078 # Protein_GI_number: 15841112 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 6 310 2 303 307 341 56.0 1e-93 MATPELRHMLRDDDLNHEEQKQVLELAIKFHKNRFYHQPFAGPQGIAVIFDKPSTRTRSS FSIGVAELGGYPLVIDKSGSQLGRGEPVADTARVLDRMAYGVVWRTFGQDRVEEMAKYST HPVVNALTDEFHPCQILADFQTIAEHRGGVDNLKNQTIAYLGDAANNMSNSYLLGGAVAG MNVRVAGPYGYLPDPQIVADAEAIASETGGSILVTTDPNEAVAGADCVFTDTWVSMGEEA EYAVRSKPFWDYQVNAELMAKAKDDAIFQHCLPAYRGKEVTAEVIDGPQSVVWDEAGNRL HAQKALLTWLAGKARGDESLLV >gi|148337400|gb|DS264459.1| GENE 52 54723 - 56018 1556 431 aa, chain - ## HITS:1 COG:ML1409 KEGG:ns NR:ns ## COG: ML1409 COG4992 # Protein_GI_number: 15827739 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Mycobacterium leprae # 11 424 6 392 404 305 45.0 1e-82 MATEQLETLGTEDAKWLGEYSQVHMNVFGTPLRVMDHGEGAHIWDVDGNEYLDFLAGIAV NALGYAHPKWVKAVSEQAAKAAHVSNYFATEPQIKLAAKLVKLAGAPEGSRVYFGNSGAE GNEAALKLAKLYGRTLPGALPEIGGKPARIISMTHGFHGRTMGALSATWKPAIREKFEPL VPNIEFVEAGNVEALHDAFAETGQGKYGKGPVAAVIMELIQGEAGVMPLGADYVKAARKL CDEHKALLIIDEVQTGIGRTGAWFAFQRDDLSGGVTPDIVTFAKGVGGGFPMGGMISFGA ELSALFTPGSHGSTFAGNPLGASAALATLGVIEEDNLVDNAEERGKQLRDGIASCGNPLF VSVRGRGLLDAIELAHPCSHAAMNWALEHGLIVNAVAPNALRLAPPLVITAQDVDQAVSI LAKIPSDLPND >gi|148337400|gb|DS264459.1| GENE 53 56008 - 56964 1012 318 aa, chain - ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 13 307 3 295 317 342 62.0 7e-94 MAKELKGPGFHFDVHTDLRADQKAEVLIEALPWLEEFAGQRIVIKYGGNAMIDDHLKACF AEDMVFLRQVGLHPVVVHGGGPQISQMLKALGIKSEFKGGLRVTTPEAMDVVRMVLTGKV SRELVGLINAHGPFAVGLSGEDGALFSAMQRKPVIDGKPTDIGLVGDVVSVDASAVEDLI NAGRIPVVSSVAPNEDDATEVLNVNADSAAAALAAALGASKLVVLTDVDGLYADWPDRDS LIGRIGVENLRDMLPDLESGMRPKMEACVRAIDGGVPRAHIIDGRKPHSILNEIFTTDGI GTMVVPEDGIEMRSSYGN >gi|148337400|gb|DS264459.1| GENE 54 56975 - 58147 1180 390 aa, chain - ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 390 19 407 407 312 47.0 6e-85 MSVTFAQGFSAAGVAAGISAVEGKKDLALVVNNGPLDAAAGVFTSNRFCAAPVQWSRNIV SDGHVKAVILNSGGANACTGKPGYEQSKATAEKVAGLIGAKAEDVAVCSTGLIGELLPLD NVLSGADKAFETLADTAEAGADASHAIMTTDTKPKTVELEGSNGFRIGGMVKGSGMIAPQ LATMLCVITTDAVVTAGQLQAALNAGVEMSFNRIDVDGCMSTNDTVLLLASGASGIEPDP DEFNELVAKATASLARQIIGDGEGASHDIRVKVTGATTEEAALACGRAVAASNLLKCAIS GNDPNWGRIVSSLGTVPPDVAPYDSEKVTVDVNGVRICENGGAGRDRSEVDMTPREVHID IDLNAGEAEATVWTDDLTHEYVHINADYES >gi|148337400|gb|DS264459.1| GENE 55 58144 - 59280 1277 378 aa, chain - ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 20 378 15 357 357 288 45.0 9e-78 MLNVFQRVKEKRRDMAKYTVAVAGATGYAGGEALRILAAHPNFEVTCVAGHSSVGDKLGK HMPHIPQLADLVVEDTTPEVLNGHDVIILALPHGASGALASQLDPNAVVVDLGADHRLEE KSAWDAFYGGDFYQHWTYGMPELITGVAADGSYSRQREALPGTKRIAGPGCNVTATTLAL QPGIAQGLVESKDIVADLVVGYSGAGKNLKRTNLLAAEAFGSALPYSVGGTHRHIPEILQ NFAHAAGKSAAEADDYTLAFTPILAPMARGILATVSAKLTDKALGMTDAEIRQVWLDAYE GQDFMVVLPEGVMPATANIIGSNAAHIQVVVDHHAGRLLAFAAIDNLNRGTAGQAVQSLN VALGLPEDAGLTKIGVAP >gi|148337400|gb|DS264459.1| GENE 56 59382 - 60107 795 241 aa, chain - ## HITS:1 COG:no KEGG:BAD_0926 NR:ns ## KEGG: BAD_0926 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 227 17 243 257 328 98.0 1e-88 MNEPEQNQPINPDEGQEAAGAAPVSSSSPSDQSAQPEFGQYNQPEYGAMSNQYPANYNPY MYGAPDQPKPADDAQQTAQRPQTNPYMQNGYPANPYDASGRQQSGQPNGYQYGPNQYGPS QYGPNPYQQPGIYPINPNDPSQNPLYGHWDSYAIISFVFALFLPVPVIPAVMGAIAMWRT KKLHMKGYALGVAALIINVLYTIAVIWMTVHGISTADLYNQMMQYMFGGSGQSGDSSSIS A >gi|148337400|gb|DS264459.1| GENE 57 60152 - 62761 3282 869 aa, chain - ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 174 869 1 673 673 434 38.0 1e-121 MPMVDIDWLKDHVEVPEGLTYEQLAKDLVKVGLEEEEIHTSQVTGPIVVGYVVDATPEPQ KNGKIINWCHVDVGDEYNETDENGNKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFKIE PRKTYGHISNGMCASERELGLGDNHDGIILLRKYGFTPEEYEKLQPGDDAMHLLHLDQPL LEINITPDRGYAFSYRGVAREYHHSTGAVYTDPATALGKKAPVTQGLPEGAKSDIEVIVD DKNPIHGVVGCDRYYARAVRGFDPASHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQ PMHAYDLDKIEGPIVVRRANEGEKLTTLDGKDHDLSVEDLLITDSPNGERGSRVLGIAGV MGGLYGEVTAETKNILLESAHFDQVSIARSARRHKIPSEASRRFERGVDDQLQPAAAQMA AELLVKYGNGEPSEHPTDYNTVCNRRPILFKASEVARVAGLDTDVNTISDILTDIGCTVA GGGNGEFSVTPPSWRPDLNEPCDLVEEVARLVGYDEIPVTVPPAPVEGKVGLTAEQLRKR QVADELAEYGMVETLSYPFVGDEDYKNFALDADATKKVSVEIANPLAGDRPFLRRDIIPT LAQTVQRNLRRGVENVSLYEIGHVYLWDPNAPAIPALPGAVKPTDEQLAALDAGLPDQPM HVAGILTGNAVDSGWMGDRRAVDWSDAVEAVQRISDRIGAKLTLDQPKAEDVPAQWHPGR AARVMAGDTFVGMVGELHPHVNEALGFPAHSAAFELNLTALFATLSGKPVQAKPISTFPP VKQDLAFTVSTDVTAAELEKTIVEAAGNSLESIDLFDVYTGDQLGEGLKSLAYAVTFRAE DKTLTSEDSEAIRKRIVDAAAKLGAQLRA >gi|148337400|gb|DS264459.1| GENE 58 62769 - 63836 1545 355 aa, chain - ## HITS:1 COG:Cgl1356 KEGG:ns NR:ns ## COG: Cgl1356 COG0016 # Protein_GI_number: 19552606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Corynebacterium glutamicum # 11 351 10 341 345 392 53.0 1e-109 MAEGAVFDAQAVTDAVAEGIAKIENASTMEELKAIKTQYAGAESAMTQASKAIGALPKDQ KKDAGKLMGKLRADFGRAFGTKEKQVKAEEEARELAAETVDMTLPVNRKPLGARHPLPKL MEDVEDFFISMGWQISDGPEVETEWYDFDALNFGPDHPARQMQDTFYVKGNQAKDAAGFV GSNMVLRTQTSSDQVRGLITRGVPLYIACPGRVFRTDELDATHTPVFHQVEALAVDKHLT MADLKGVLDKLAVAMFGPEAKTRLRPSYFPFTEPSAELDLWFPDKKGGAGWLEWGGCGMV NPNVLKSAGLDPEVYTGFAFGVGVERTLLLRHDINDMHDLVEGDVRFSEQFVMGE >gi|148337400|gb|DS264459.1| GENE 59 63903 - 64775 867 290 aa, chain - ## HITS:1 COG:AGc593 KEGG:ns NR:ns ## COG: AGc593 COG0566 # Protein_GI_number: 15887691 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 8 279 26 277 290 117 32.0 3e-26 MPMKSEVIANPRAERVRRVSELADRKGRKRSGRFMVEGPQSVRELLSWHPDIVEDLYVEV VSAEPDAAFITPTVAQMAGKAMQTGAYVHKVTHAVMQHMSSDAQGVLAVADMRAFLDSAV IDGDFDERTMVAAFWQVRDPGNAGTVIRSADAAGCAGVVLVDDCVDIFNPKVIRSTAGSL FHLPVVSMGTDEYFDWCAERGLAVYAADVYGTDARPPEPLTDVLAVPQSLAQAKTVLFGN EARGLTQDVLERVDRIVSIPIYGKAESLNLGTSAAVMLLSLAMSSHVERM >gi|148337400|gb|DS264459.1| GENE 60 64986 - 65444 358 152 aa, chain + ## HITS:1 COG:no KEGG:BAD_0930 NR:ns ## KEGG: BAD_0930 # Name: not_defined # Def: transporter # Organism: B.adolescentis # Pathway: not_defined # 1 119 1 119 243 153 99.0 3e-36 MFVVKNAWKSVTRNKGRNMLIIVIVTIIAAAATIGLSIRQAAATARSSGLDNTTATAQIS LDRGKLISESREQSKSDSDSSDASAKPDFDAMRSALADKQFSLADYQKYAKASSAVKSTI IWRPRGWRRPTISSRSPIRPVRIPPARPARPI >gi|148337400|gb|DS264459.1| GENE 61 65348 - 65716 453 122 aa, chain + ## HITS:1 COG:no KEGG:BAD_0930 NR:ns ## KEGG: BAD_0930 # Name: not_defined # Def: transporter # Organism: B.adolescentis # Pathway: not_defined # 1 122 122 243 243 142 96.0 3e-33 METTGLAATDDFQPVTDSSGSDSSSSSGSSNMKDSSDTAGTDNGTRQDEQSGGPDGQMGD VAGSKDGAGMVSGDFSLIGFSSDEAVANASNGSFTMVKGKVFGYDASSDGDAIISKSLAD RS >gi|148337400|gb|DS264459.1| GENE 62 65754 - 66506 960 250 aa, chain + ## HITS:1 COG:BS_yclH KEGG:ns NR:ns ## COG: BS_yclH COG1136 # Protein_GI_number: 16077441 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Bacillus subtilis # 33 237 4 207 226 173 42.0 3e-43 MTTNSANTANTAIAKEAVETNGAQSQQTDPPTLQLDNVSYAYTKGGKRVLKNISHDFQAG KVHAITGPSGAGKTTLLSLISGLANPTEGMVLVDGTDLSERDRYRFRSHDIGVIFQSFNL LPNLTVAENIILSMDASGKSFDKPKKAIVEELLKQVHLPKEYANERILHLSGGEQQRVAI ARALSYGPSIIVADEPTGNLDPATQDDIMGIFRMLAHDEHRCVIIVTHSPEVAKTSDEVF ELAPIKRRKR >gi|148337400|gb|DS264459.1| GENE 63 66624 - 67166 662 180 aa, chain + ## HITS:1 COG:FN0535 KEGG:ns NR:ns ## COG: FN0535 COG1611 # Protein_GI_number: 19703870 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Fusobacterium nucleatum # 2 179 5 182 192 160 42.0 1e-39 MNITVYLGAHEGNDPSYRKAVEELGAWIAGNGNRLVYGGSDEGLMAVIADAVLSHGGEVT GIEAQMFADQGVAHQGLTELVIVPDITERRTRMIELGDVFIAFPGGTGTLEEVSEVVSKI CLNQLSQPCIFYNLNGFYDDMKAFLQRMINVGFSTSERQHGIYFASNLTEIEHIIATHQA >gi|148337400|gb|DS264459.1| GENE 64 67196 - 68125 988 309 aa, chain - ## HITS:1 COG:L181807 KEGG:ns NR:ns ## COG: L181807 COG0679 # Protein_GI_number: 15673902 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Lactococcus lactis # 65 306 4 238 238 86 28.0 6e-17 MLFQAGSLLLVIISVYLLKRIHIFSDKSYKVVQGLVFNLTLPCAIIMSFATNKHPMNLLW LVVFGLFACLIPLFVVYFGSRGDEPRYRAYQMLNASGLNIGAFCLPVVQTFMGPSAGLPV IMLDIGNAIIATAASLTITRSLLHLGSPAKNLPLSLKIKNIAHDFYSSISFDCYMLMLVF MFAGWSVPHWIVTLITPFANANAFAAMAMIGLMMEIPDNHKDRSELGKVIAWRFLFSVLI ALAAWFLLPLDERVREIVVLAAFAPVTIFSTKFTDSLTGNAKLAGFSLTVTAVIGLTIMT ILHAVLPVA >gi|148337400|gb|DS264459.1| GENE 65 68543 - 69979 1726 478 aa, chain - ## HITS:1 COG:Cgl2165 KEGG:ns NR:ns ## COG: Cgl2165 COG0174 # Protein_GI_number: 19553415 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 3 476 2 475 477 617 63.0 1e-176 MTALETKADAEALINKEGIEYVSVRFTDLIGVQQHFTVPASEFLKDAFTDGMPFDGSSVE GFQAINESDMKLVPDVSTAFIDPFRKHKTLDVAFSIVDPLTDEPYSRDPRQVAGKAEAYL KSTGIADTASFAPEAEFFIFDKVRFENSMQRSFYEVDSIEAPWNSGIDTEDDGTPNIAFK NRVKKGYFPVPPIDHTQDLRDDMVANLQKVGLILERSHHEVAGAGQQEINYRFNSLQHAG DDLMKYKYVVHETAALAGKAATFMPKPIAGDNGTGMHCHQSLWKDGKPLFYDEKNYGGLS DLARWYIGGLIKHSSSVLAFTNPSLNSYHRLVPGFEAPVNLVYSARNRSAAIRIPLAGTS PAAKRIEFRAPDPSCNPFLAFSAQLMAGLDGILNHIEPPAPVDKDLYELPPEEHAGIKQV PSSLAEAMDALEEDHDFLTAGDVFTDDLIDTWISIKRGEIDQARLAPTPLEYELYFHI >gi|148337400|gb|DS264459.1| GENE 66 70023 - 70238 85 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVARFAHSPFGLRECFVMTYSRCDFAENHDSIVTNSHVRPFRSVHLMDRQHEKGPDRMNT IGTFRDIMRVL >gi|148337400|gb|DS264459.1| GENE 67 70242 - 71030 1082 262 aa, chain - ## HITS:1 COG:no KEGG:BAD_0944 NR:ns ## KEGG: BAD_0944 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 262 1 262 262 511 100.0 1e-143 MADKAEKKKQKKQGTISQIIQIFKYTQAEDKALPWLCGGVFVAPIVVFVVLGVIFKWHVF SWILFMILAVMLGVLFATMMLTKRADKVGYAKIEGRPGAAVSVLGNISKAGFNFPQEPVW IDPKTKDAIWRGTGYNGIYLLGEGDYNRVKRAMDRQEQRIKGVTAGSEIPVYRMYVGTGA NQTRLKDVRKTLLKFKSYQPTHHKNKLMAAIHPRTRFVLTKTELTVLNERLRTLQLKNGM SVPKGVDPMHPQRVSRRAMRGR >gi|148337400|gb|DS264459.1| GENE 68 71126 - 72607 601 493 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 6 491 4 457 458 236 31 2e-60 MVQQHFDIAIIGAGPGGYSTALRAAELGKSVALIERDGTLGGTCLNRGCIPSKALLTAVH SVETIHNAERMGINATLQSIDFGRLRDFRVSTVETMTKGLTGLLAHRGVTVFRGCAALQN AHTVRVTPAEGETQVSRSVEAGVFEPVETELAIDADDVVLATGSRPLALPGNPFAGALID STQALELNTLPSSAVIIGAGAVALEFASLWNAAGCEVTLLIRKDRVLSTWERRASMTLTR ELKRRGVNVIARTAVDRVDTGANLGATVHYRQGDSDEDRTAYGEVVLAAIGRVPNTDADW FRSSGLKLDERGYVTVDGYGRTNLDGVWALGDITPGHALAHRAFEQGITIAEKIAGADPK PVLDDTVPQVVFSFPEAASVGLTLDQAKAREDVVEPKETAYPMLSNARMLMSGEGGSMTV VSGAFANNPDMQVVLGAHIVSPIASDLIAEAEQLVGNRVPLADAARLIHPHPTFSETLGE ALLKADGRPLHTR >gi|148337400|gb|DS264459.1| GENE 69 72757 - 73359 620 200 aa, chain - ## HITS:1 COG:no KEGG:BAD_0946 NR:ns ## KEGG: BAD_0946 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 200 42 241 241 377 98.0 1e-103 MSLFTKKEEPAQENVESKAAQPTSGKGRPTPKRKDAQAQNLRPLVPKDRDASRKAAKARI RERENAEYDAMQSGDINHMPKSERLPWRIYIRDYVDARFNLGEFFIPVAFIILIGSMVVT YKWPALALPLMLIMYVYLFAVIIDVAVMWHKLKKKLIEKFGEQSVAKGMRSGSYAWSRAI QIRRWRLPKPRYPKRGHWPE >gi|148337400|gb|DS264459.1| GENE 70 73542 - 74909 1726 455 aa, chain + ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 24 440 39 447 470 292 41.0 1e-78 MTALGPEEIRTRVESDFNRIVDVLNQKIALQSISAKGITADHMKRSAQFVADLLREVGVD TKVVQSHNPDGTPGAWEVIGSKNVSEDAPTVLLYAHHDVQPVPDPSVWNTDPFVGTEIDT RLYGRGAADDGGGIAIHSGALKALEDDLKVNIKVFIEGEEEMGSPSFIPFIEEHRDEFAS DVIIVADSGNWSAEIPSLTTSLRGNTDIDVHVKALEHPVHSGQYGGPILDANTLAAMLIS SMYDANGDLAVPGVASEEPVGGLQRDMDEATVRADAGIVESYRLAGTGSLAARLWTKPSV TVIGFDAHPVEGSFNVISPETTFRLSLRTAPNQRPEEAQEALAKFMVEHAPFGAEVWVDK LDNGMGWAMDPNAEATKDAMNAMEEAFGVAPVNKGEGGSIPFIPELQRIFPKAQVLVTGP EDPKANAHSPNESISLPALKNNVITEALLLDKLAK >gi|148337400|gb|DS264459.1| GENE 71 75023 - 75901 856 292 aa, chain - ## HITS:1 COG:Cgl1056 KEGG:ns NR:ns ## COG: Cgl1056 COG0619 # Protein_GI_number: 19552306 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Corynebacterium glutamicum # 42 285 6 248 251 192 43.0 7e-49 MLETNKNSGRDGNEKLETITVVPHKERRNETKPASPSWFVAKINPVSRFIGALILCIPMF FTLDVVSASVAFGLEMLLLWIGGVAPWTVLRKTWPVWIAATGSFVSVALYGKTSGTVLAN LGGIIVISQGSLYLALATFLRVAAIAVPGVILALGLDPTDLADGLVQILRLPQRFVYGGL AGMRMFTLLQDDWRALGQSRRSRGLGDGSTIKRVFSQAFSLLVVSIRRGTKLATAMEARG FGSDAPRSQARESKLHAVDWLFYAICIAVPAIALATAYYTGYWHWAFSNVSN >gi|148337400|gb|DS264459.1| GENE 72 75903 - 77396 248 497 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 218 496 92 339 398 100 30 1e-19 MTTDVQNTTAAGVTAHDWGWRHASRKDFALRHVDFNIKPGERVLLLGASGAGKSTLMSGL AGVLGGDDEGEQEGELLIDGVDARHARGRCGLVLQDPDSQTILERAGDDTAFGCENLSLP KDEIWNRARAALDIVGLDYMAFDRSTRGLSGGQRQRLALAGVLAMHPGLLLLDEPTANLD PDGVKEVHDAVRHVLEQTHETLVVVEHHIDVWLDLVDRVIVLGKPEADSNVGGVIADGTP DEVFGHMGQVLADGGAWVPGRTIESHAPKPEQIRQPQDVVLYTRDLSFGYDFPLGEHIDL EFHSGEVTALTGRNGVGKSTLGLTLAGLLKPIAGRVCMADDLVPPHRENNVITWKSRDLL GRIGMVFQEPEHQFAASTVRDEVAIGPKSMGKTDEEAYSIADRLLERLNLSRFAKANPFT LSGGEKRRLSVASMLAAAPKVLVMDEPTFGQDFTTWTSMVQLIAGARDQGCAVIMITHDE PLIEALGARRILVREGE >gi|148337400|gb|DS264459.1| GENE 73 77517 - 78131 941 204 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 7 199 3 199 201 103 39.0 2e-22 MTEENQSSAVRKHNNKWRVVDIVVAAIIAVASGVIFWGWDIVCTAPLALFEAVTPGFEGL LNAFWLFAGPLAAIIVRKPGAALFAETLAAALELTMGNQWGVGGSLIVGIVQGLGAEIGL AIFAYKKWDLLSTTISGALAGVGCGLYYWLTNPAWSALRVSIYLIASAISGAVLAGAVMY LLQVAIAKTGVLDRFESGRTQELV >gi|148337400|gb|DS264459.1| GENE 74 78184 - 78267 77 27 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRHYPVYVHTVEAVASSQPFGPRVCA >gi|148337400|gb|DS264459.1| GENE 75 78384 - 79505 1118 373 aa, chain - ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 7 365 11 372 383 288 44.0 1e-77 MSDEHTIEARIYERLSKVIDPELGRSVTDLGMIAAIDATPVAGETNTYDVRVRVELTVEG CPLSQTITNQINGAVASYPDATLIPSIEVGSMSQDKLTQLVAGLKAERKQNPFNKPGIKT RIFAIASGKGGVGKSSVTANLAATFAALGYDTAAIDADIYGFSLPRLFGVQSQPTNLNGM LMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGEPDVLLLDLAPGTGD MAISVAQALPNAELVVVTTPQPSASDIAVRSGLVALQVPMKVRGVVENMSYYEHKGEKLR IFGEGGGARVSEQLTHSLGYEVPLLAQLPLEPELRETGEAGRPAVLTKEGALRSDGIGET FRNLAESLMRLPQ >gi|148337400|gb|DS264459.1| GENE 76 79571 - 82243 2802 890 aa, chain - ## HITS:1 COG:Rv3014c KEGG:ns NR:ns ## COG: Rv3014c COG0272 # Protein_GI_number: 15610151 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis H37Rv # 62 543 6 473 691 484 53.0 1e-136 MTNRDDSEQLAWDFDAPESDGSSAAVVADEGLASLTPGSERWIAALQPTDADAMRLDKVD VASMSAEAAARLWARVAAWVESDQIAYYIDDAPVSSDAAYDARLRCLQSLEAQFPSLDSP QSPTHRVGGTFSNDFASVRHPSRMMSLDDVFSIEELREWYDGVLRGLDWPESKPLPMTCE VKIDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTISTIPQNLAGPEEDIPEFVEIR GEVFMRWDDFNKLNAENEDAGRAPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIGSLR WGAGHAGNGHDVVNDQSEAYELYKKWGVPVSPHNREVTSFKEILDMIDYYGEHRGDIEHA LDGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPVAVL KPVYVAGSTVSRTTLHNPFEVERKGVLIGDTVVVRKAGDVIPELVGPVLERRKGREGQIR RFVMPTRCPSCGAELAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGDQSA IALTNPEEDRPDSIDTYAPNITEIVVKPGEEPEPYEPVAGLELPPMQTPVLSSEAGLFSL TSADLKDVRVWREAPIIEIHETVGSNGKIKKVRKRVGGSGLWHQVPAFWTAPTAARKRKE ADIDETAEYPQYVVPDDAVVIREEIKVSRGGTSSVQPVYIRPAENTRKMLDEMDKARHAD LWRVLVALSIRRLGPPTARTIASAFGTLDAIEHASVDELSQIDGIGPEIAESVVTWFTAA REPGNWRGAVLDAWKAAGVGVGQAQASGLPQTLAGKTVVVTGSLEGFSRDSAKEAIVLRG GKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLNEDQFKQLLDTGTVE >gi|148337400|gb|DS264459.1| GENE 77 82328 - 85648 3092 1106 aa, chain - ## HITS:1 COG:no KEGG:BAD_0953 NR:ns ## KEGG: BAD_0953 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 1106 1 1106 1106 2075 99.0 0 MLERVRQNVRRLVNQATPRHIHANPFGKALDKPDDIVDELTRNAIRLNPLIKRHVIDGFE GVPGGFRLGWAQLPQTHGHAFSIGLFTDSDHFAQIALADGKARVFAGTDPDMDTQELEPR FVFVKEETLTLADGPRLGHAASRNPKTVRATQGGVVGRMPGGRMMWLASWLKTGSRYTLE QMRANLPANMRFDLEYRDAITIAFFAAYMLPQMNGLLVGFGSGNIFRRLNREAPIGAIRR SIRDTMSARSHGMRASGLEDYFADLMREAHALDTDQGLEAVHGAEPLRLYTSSYSGCYFF AWDSSLPFSAVLCALNIEGNLNRFAAVSSWLERNARIGALPTENTVTRAEAAQIDFALLE NPALIALKPDDRFGAILDPNREDGIQAASRLADIAADFRREVAESTKDNVLEGDSGADGG SEWVYRQTMSRLLRSLRLPYRFDVDFRCDLSDGEVAIGFTSAGVSMMPFTRYDVSRRAWI DLTDVERTRMSVDYNLRVGLMMAALSFGADPNVKRVSMHIDSIGLEEAVAEQDSAISELM SEALSAFERIRTGDMRPSGSKAAPKDGDYHGDPARPVTPRTTDISSESIDSDDSAGSDSV GTGDDTVDGQFEDLMKNIDFDEMAFAVPDGRADDDDASMRDDASDKTEYDTYLDDDDDDP MAQLRKNPTVRNLVTVTFTRDEFLKRLDTDGLAHPTATYRMFDAEMDVDGKGALKPIDAA FDLRDSRFSPAGSQEEPELSDIRFDDGTAQLFGCENMMGLSIQRVDLLQRAVGEFHRLAQ SDGLESVAKAKQAMGIINSISDPELTELAPQVTSALIDGEDTPDFSFELAQSLDDERLKA RDMLFSGDVERAIESAQSTLERMDRIFAENPGVPRYFNSYAERVIYNRMFATEGERTVLI PDNLFYMHMELADLLAQVKGVDAALPHLNAMVRYAPAYPLSHLKLAVQLGRAEDWDPARA ACLNALNVALDREDASFAYYRLAYAEWMCDHFDLAAASYIMSEEIAPGRIAMLESELQEL IGRAQSQCIPVPTNVQEAIHVLADAGLPVWPNTPVAPLMHQAARVCVDKGMFVPARTLSV AAMRMDYEDHDGADVVQVQFLRSLNN >gi|148337400|gb|DS264459.1| GENE 78 85753 - 87930 1198 725 aa, chain + ## HITS:1 COG:no KEGG:BAD_0954 NR:ns ## KEGG: BAD_0954 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 14 725 1 712 712 1247 98.0 0 MTFSKQRFQARRRMCAAIVVAFAVMVAVECVLCNMPFWRSLAASGDSAAAYNMLGPGLER TDEGLLKVTDPTQAYMQVDADGSSEYVRMDPVSSKALDKAARQSEQMLRTVRVRPDVNRR AGTVSSVSVSSPRSLYVHAAAAGGSVCVRIVEPKGSLIPFDAVRANVRVPFALNPLRIGV MVAVLAMVLVWRPGSRLWRMPLDTTSVRQRAWLGALLAVPAVVTCAVVVWQLVEAAPLSF HTKGTYTYDFDQYDYVARALLDGHAWLDLDVPDALRDAADPYDVATRQRLLADGVSPVYW DYAFYQGHWYSYFGVVPALLLFLPYRAVTSLFVDGGLMMPCGAAVPLLMLGFLVFGCLLV IRVISRIRPNAPLAAVSMLCVFMLLASNGLYLWYRTNFYSVPIAASLFLSVLGLWLWLGA AKRVPVSGDRIREVDGTQSLSLPHLAAGSMCIAANLGCRPQFILVALLAFVIFWPQIQSI FRHASNDSSIPHMSVWRLMRTPLAALLPALIVIVPLLAYNVVRFGSPLDFGTSYQMTVTD MTSYRQPLSNLALTVSYYLFLPLRFTDAFPFLAVSPAPLPTWGFTEAMPGGLFTIAPLTL AALACPFLYRRMRKAGRTNTWLLLTSSLALGLLLVVLDSRMAGLGWRYIADFGWLFALAA LPSLLIVLDCGKPRLRWVCRAGFLALLLFTLVVALMSLFLPGRDDEMLRNNPALYLDVQS WFMLG >gi|148337400|gb|DS264459.1| GENE 79 87894 - 88037 77 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTITMIADETQSKPEKLLYESGKKPEFLLDVAYVGRQPNMNQDCTSR >gi|148337400|gb|DS264459.1| GENE 80 88027 - 88389 144 120 aa, chain + ## HITS:1 COG:no KEGG:BDP_1333 NR:ns ## KEGG: BDP_1333 # Name: not_defined # Def: arylsulfate sulfotransferase # Organism: B.dentium # Pathway: not_defined # 33 92 281 340 555 84 68.0 2e-15 MIVIIVALSYVPGVADHETAFAATQPSSGRTSDAKGDIVLLTTELGRDDNAVQDQVVKLD AETSSVARLLDFGSLLADYKASATHAGTDDSDELPVDLRAVAPAVRYNRRYGFLRFAVRR >gi|148337400|gb|DS264459.1| GENE 81 88358 - 89167 1009 269 aa, chain + ## HITS:1 COG:MJ1088 KEGG:ns NR:ns ## COG: MJ1088 COG1122 # Protein_GI_number: 15669276 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanococcus jannaschii # 30 248 13 225 279 94 29.0 2e-19 MGFFDSLFAGKHSTPASSVTFHLDQAAHMYEDGNIGLEATTLDITPDSKRVAIIGLNGAG KTTLLKLLDGALAATSGTVRIEADGTAYDPAVKRDLKHVEDLVGRVRREEIPNAYYKAAS IREAIDLPLKKHKVPESERQAIIGNLFAHFDLASVAREPASALDSEKRHLLAIAAALSFS PAAIVADEPTKGLDEVASARVAKALFSYDKQVVFATHDTDLIVRPEYAIGRVLVVDDHRV VFDGVPREAVDFYTDLVRSKYEAAKGDRA >gi|148337400|gb|DS264459.1| GENE 82 89194 - 90360 1297 388 aa, chain - ## HITS:1 COG:SPy1779 KEGG:ns NR:ns ## COG: SPy1779 COG0436 # Protein_GI_number: 15675619 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pyogenes M1 GAS # 25 372 31 388 404 108 27.0 2e-23 MRFSSRVDISEPNPIAKAEATAKTAGRPLGKLNDSNPTRHALAPDLVPDIYSADPRGQRY AREALAAFLDMQEIGHCSPDDLYILSSTSEAYSWLIKLLCDAGDAVLAPKPGYPLIESIA RLECVDMIEYQQRFDGSWYIDVAELKTALEGPDGNRIRALVLINPNNPTGSYVKPSEREA IVRLCRDHDVAIIADEVFYDYDLEPFEGNARLAGERGALTFALDGFSKMLAAPHAKVGWI QVSGPAEDVAEAKRRLDVIADDYLPMSEIVAKQIPALLEAAPSQTARVQERVRGNLKALH AMLDADEQGLVSVLRAEGGWNVLLRVPSVLDENELVLHMIERHGVSGQPGYFFDMTSNGY LAISLLPEPDDFRHNVYVVIDTVNELIG >gi|148337400|gb|DS264459.1| GENE 83 90472 - 91239 1098 255 aa, chain - ## HITS:1 COG:DR0823 KEGG:ns NR:ns ## COG: DR0823 COG1940 # Protein_GI_number: 15805849 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Deinococcus radiodurans # 8 252 5 245 279 222 49.0 5e-58 MIETAQAFGVDVGGSGIKAAPVNLEKGEFAEPRLKILTPEVSTPKAVGEIVRQQLEHFEV PESAPVGIAFPAPIHVGEKLGYMANLDQSWVGVDVTEVFSEACGRPVTVVNDADAAGLAE QQFGAAKGQDGLVIATTLGTGIGTALIFNGELIPNTELGHLELLKGKGDAEKYAASSIRE KLDMGYKKWAKRLTKYYSLMEFYFDPQLFVVGGGVSRVSEKFLPYIDIKTPIVAAKLHNE AGIIGAAYYASTKQK >gi|148337400|gb|DS264459.1| GENE 84 91494 - 92576 1427 360 aa, chain - ## HITS:1 COG:MTH348 KEGG:ns NR:ns ## COG: MTH348 COG1216 # Protein_GI_number: 15678376 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Methanothermobacter thermautotrophicus # 36 242 2 216 313 97 31.0 6e-20 MPVLGSISNMADVWLRAGARMERMTEKQVAKKTIEKLAIVVVTYKRQQLLATLFESIEKL TVAPWRIIVVDNEHSDKTHGMVEEFSAKLTAQWGTTVADLSGNENRVVYAPQTDNLGGAG GFSAGVKKAYELGAEWFWVMDDDVAVMPEGIERLAKWTDRHDVIQGSRYDYDGGPFYWQY DFIVPLGIPNPIAPAAFGPAGYRVMDTLCFEGGLFRRNIVEKIGLPDPRFFIYWDDTMYG YRASKVTNPIVVPDVVLRRTREIGNWDIAGVRQLNSTSDMNRYHIMRNRGYMARYFMTYG DYRPLLFGLGTVLTAVKEVIRLTMVDREHFKTGIVQIAKGWWDSRKLLHDPEWQPMPPLK >gi|148337400|gb|DS264459.1| GENE 85 92735 - 93502 1170 255 aa, chain + ## HITS:1 COG:BH2679 KEGG:ns NR:ns ## COG: BH2679 COG0819 # Protein_GI_number: 15615242 # Func_class: K Transcription # Function: Putative transcription activator # Organism: Bacillus halodurans # 28 242 3 216 224 150 37.0 2e-36 MADVISVTNSDSAFDASKGVTRTNLPPFAQRLRKAADLVWEEGYRQPFIRELGEGTLPRE KFAFYLLQDFRYLNDYARVHALGLAKTDDPEIMAFMLNVQNGALNVESTVHRTYLASYGI TDEQMNNVRQSAFARAYTSNILSIAYGKDILDILVAVLPCAWVYADYGYRLAHEFADTLD VNQYKSWVDMYKTDEFWQGSAWLIEHIEKLAAEVSEERKQELVDIFVTGVENEYMFWSSA YDMQYTWKPEWDQES >gi|148337400|gb|DS264459.1| GENE 86 93603 - 93908 184 101 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|212638657|ref|YP_002315177.1| Predicted RNA-binding protein containing KH domain, possibly ribosomal protein [Anoxybacillus flavithermus WK1] # 3 99 2 94 97 75 45 4e-12 MALTKKQVKQLRGLATKLNPLIQVGKNDLSENAVKQADETIEKRELIKCSVLDGSGLTAK EAGEGLAEQLGAELVQVIGNRFVLYRRSQRDDVEHIRLVRE >gi|148337400|gb|DS264459.1| GENE 87 93990 - 96317 2194 775 aa, chain - ## HITS:1 COG:MA1418 KEGG:ns NR:ns ## COG: MA1418 COG1122 # Protein_GI_number: 20090278 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Methanosarcina acetivorans str.C2A # 8 508 1 497 528 236 30.0 1e-61 MVTTNAPIITLRDVRFTYDGGATWALDGVSLDIRCGERICLTGPNGSGKSTLSRVIAGLV APDEGYVVLSGNVVFDESGAHADEYRTARCGIGAVFQHPEDQIVTTVTEDDVAFGPENLA IEHDEIGLRISGSLDAVDMSDYRASDPTRMSGGQQQRIAIAGMLAMDSDVLVLDEPTAML DPQGRADIMRVLDELQDRGTTIILVTHHADELEHADRVIQLEAGHIVGDGPADERLRMPV QSVGLPKRIDDEPAETLIEARDISYRYVDAERDVFNHLSFSIGKGETVALMGRNGAGKTT LARMLCALEKPTTGSIVIDGIAVATAKANGGTKPLNRKNRARLRRTVGYVMQHPERQLFA DTVAEDVAYGPSNLGLDTSEAMERAMQAMRLLHIEHLRDRSPFDLSGGQQRLVAIAGVIA CEPKALILDEPTAGLDEEAAARVHGLIHELKSRGVTILLISHSQDEVDELADRTIILGKP AKRADSKESTESTVKATCEAEPDAESSVDAAGSDTATVGERRTLLERLDPRVGMLSALAL MFSAFAIGSFWQLLLAVVFAGVIAAAGRINVGRLAASVRVFLALFVFCGLLNIFFVRTGT TVASLGPIPITDDGIRIAILYACRFAVVIVIGAMFLASTTPTAMTDAFESLLSPFARFGL HTQETALVMSLALRFLPTLGMETKAIIDAQSARGGSVETGSFVVRIKAMVAVVVPVFAAA IRHADNLSLALDARCYEEGATRTHWRVMRVTGVDVAVAIVVLVYLVALVVPGVLL >gi|148337400|gb|DS264459.1| GENE 88 96431 - 97057 910 208 aa, chain - ## HITS:1 COG:TM1455 KEGG:ns NR:ns ## COG: TM1455 COG3601 # Protein_GI_number: 15644204 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Thermotoga maritima # 40 206 3 171 183 94 36.0 2e-19 MSVSSPSNTSNTAADQAADKPMTRPDNAHSTGVADSGRWSTKRIAMYALFVALSMAVSFI EFPIIPGVQWLKYDPSGIVCLVAGFAFGPAAAVIVSVLGFVPHLFTNPWGTLMAVLVALA LSVPASLIYKKNKTRKGALIGIIVGAVVALAVAIVGNIIVTPFYAHMTTAQVVALIVPAL LPFNALKFTIHGVVTFLIYKPISNLLNR >gi|148337400|gb|DS264459.1| GENE 89 97115 - 97237 59 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGVYMDKQVSGKVKILTGGNGTTGIHNGPIPKPATRESG >gi|148337400|gb|DS264459.1| GENE 90 97315 - 101133 4364 1272 aa, chain - ## HITS:1 COG:FN1160 KEGG:ns NR:ns ## COG: FN1160 COG0553 # Protein_GI_number: 19704495 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Fusobacterium nucleatum # 640 1271 482 1086 1089 474 39.0 1e-133 MGVQVADTLAWISDELRSECSQPVLQRARGIANQWRSKMEDLHCLNDTASNRITLYATIR GTTSPSSRYEVQATLDFADELFLARYCSCPAFSGSQRGYGSYRTFDYHNSPKYRSFDDDD DYDYVDDYDDFGSGSTYGHVNDDDDSASSTSRRYTGMCKHVAAMLLLFLQQPERFRGFHA AAATPRALADYMRSLDAKSNNAGENAQLDVLKRIINAKSRLIEEQRGASGQGAAKPKRKS SAPVDVKPGSVYLEPTLINGHDALRLSLRIGCGDADYALKNISRFVADMRTGTYESYGKK LAFTHTPDMLDPFSLKLYRFLQQVIASRTAAQLQNGYYYGEAVRVDRELVLTDWEACDLL DLFHAVTQDEYKEHESKARGFLRTSDGDGLRRLLIEDFQRTKESGPSRIHMANEGGEPFG LDIVEGDPTFTFKASYVHEGTASGVRITSNQSISDVINGRNGFYVFSRERPDDSTATDRI GIDGLFRCTDKLRPALQVLPDLCSDDPDGVFIAENDWPMFARTIVPKLTEAGIGFDIPQE VTEAVGTECRIEFYLDRDLYGITCEAVAKYGDFTFQLVPTAKELRGVINPDSRSRASQVK RDLSRESFAVQVVRQLCPTWSSIDVARVKEEDEQAILLMLTDGVQILKSVGQVFSTAAFD GMMQPNPPSVKVGLSIDSNLVEISPIADEVPMNEVGALLDSYRRKRRYHRLKNGTFVDLK EADLHELDQVSTDLDLSEKQLDSGIIKIPGYQAFLLDSQVDDEGKSASFVDYVNDVKIVD PKRYEVPERLKTVLRPYQVEGFQWLSTLWDKGFGGILADEMGLGKSVQLLSLIEARKGNG PSLIVCPASLVYNWAAECEKFAGDLTVEVVAGTKAQRRKAIATVAAQSQENDGATTNGAT TYDGTDVVITSYDLLRRDVDDYAACHFALMALDEAQYIKNHATKVAKSVKQVTADHRFAL TGTPIENRLSELWSIFDFLMPGLLGTYTKFREKYEQPIMAPGPEHSVMADKLQALVGLFI KRRLKKDVLTDLPDKFENVLTVKLEGEQRKLYAAHEQRLRATLTKASDADFNTKKIRILA EFTLLREICCDPRLVYADAKNASAKLDAIAELVATCMGEGKKVLVFSQFTSFLELIGARL AEQGVEYYTITGETPKKRRVELVDEFNGNDVPVFLISLKAGNTGLNLVGASVVVHADPWW NAAAQNQATDRAHRIGQTQDVNVYQIVAKDTIEERILKLQEKKNELARQFTDGTASGGVG TLSKDDLLGLLS >gi|148337400|gb|DS264459.1| GENE 91 101231 - 102646 1779 471 aa, chain - ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 11 466 6 438 450 343 38.0 4e-94 MTNSITAIKPERLAQYAKDFNADRANLVAANAAVSSGVLEAATDYKGQRALPRDFSIELK QGSITNQRRSGRCWMFASLNTLRYELMHQWGLDDFEFSETYLFFWDAMEKSNTYLENVFA TLDEPTDSRLFQEINYGPADDGGWWQMFAALVDKYGLVPKSAYPESANSKDSDAFKQYLN SRLRQFAADLRERYAAGATVDELRAVKDDDMSTVYRMCAISLGEPPEKFDFLARVSDDDK KDDKKSGEDEADKPKTGKDERRQIRETGITPMEFYKKYVPVDVDDLVTLCNVPMASRPFN KRYRIRYTANVAEAGDMEFVNVPLDVFKKAAVDQISAGHPIWFACDCTQFSLRAAGYFDC DSVRVDQLFGTDFDFDKAHGLEYGDSPSNHAMTLTGVNLDEQGKPNRWKVENSWGKDNGE DGYYVASDKWFDRYVTEIIIRKEYLDDATRALLETEPVELDPWQPLTKRCR >gi|148337400|gb|DS264459.1| GENE 92 102789 - 103784 1108 331 aa, chain + ## HITS:1 COG:no KEGG:BAD_0965 NR:ns ## KEGG: BAD_0965 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 7 331 1 321 321 474 95.0 1e-132 MRRHGSMMVVLSGLLAASLAIGLPVGSAYADEPTDGTGAGTSATEVLDSLEVKGRAPKTG YKRTQFGKAWADVDHNGCDTRNDILNRDLTGVRHKWRTHNCVVKSGKLHDPYTGKDIKFK KGKKTSTAVQIDHVVALSDAWQKGAQKLSEERRTALANDPYNLLAVQGRANQKKSDGDAA TWLPSNKGFRCEYVARQIGVKHKYSLWITQAEKEAISKVLSSCPTQTVPDYTGVKDSTVE KTTESEQTEQTQTEQQTEQSAEQAQQNQQTTQAPAPEPAPAPAPAPQPAPQQDVYYQNCT AARAAGAAPIYQGQPGYRSQLDRDHDGVACE >gi|148337400|gb|DS264459.1| GENE 93 103920 - 104645 654 241 aa, chain - ## HITS:1 COG:VCA0194 KEGG:ns NR:ns ## COG: VCA0194 COG1226 # Protein_GI_number: 15600964 # Func_class: P Inorganic ion transport and metabolism # Function: Kef-type K+ transport systems, predicted NAD-binding component # Organism: Vibrio cholerae # 3 240 10 251 280 100 29.0 3e-21 MTLDKWQRMTEWFMTALALVFLFAYSWEVLARTHIVLCETVINIIWMAFIVDYVVSILLA KDKKAWFKENLLMLVSIALPIFRPLRLLRLVAVLNVLNRTGGMAVRGRITLYTCCSVTLL MYIGALAELDVERGVPGASITDFGEAIWWSFVTVTTVGYGDLSPVTWQGRCIAIGLMITG VALIGIVTATLASWIVDRVRDETDKRADEAESETEQLRHNVRELTDTVNQLRDDIAQLRR L >gi|148337400|gb|DS264459.1| GENE 94 104841 - 105833 1129 330 aa, chain - ## HITS:1 COG:L51032 KEGG:ns NR:ns ## COG: L51032 COG0111 # Protein_GI_number: 15673970 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Lactococcus lactis # 62 329 49 316 325 202 38.0 7e-52 MGIENDRKLIVNCLPLTEAERAQFIRAAKGMPQEFVGDSTQRGSMNWTAEIPDELKAYAT AVIGNITPETCAQCPRLEWLQTWSAGVDKYQRPGVLHPGSMLTNATGAYGQSVSEHMFAM MWSIMKNLHIYAVGNPNAAWQDAGRVISPDGKTALIIGTGDIGSHFARLCKSVGMSTIGI RRNPTVEAPGIDHMVGFESLDDVLQYADVIAMCVPSTPSTHHLLNAERIAKLKTDAIVIN AGRGDAIDTQALADALANGMIRGAGLDVTEPEPLPAASPLWSEPKCLITPHVAGGNHLES TERRIIAIALGNVRCYANGQSLDNRMPLKG >gi|148337400|gb|DS264459.1| GENE 95 105875 - 106354 591 159 aa, chain - ## HITS:1 COG:SA1459 KEGG:ns NR:ns ## COG: SA1459 COG1490 # Protein_GI_number: 15927213 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Staphylococcus aureus N315 # 1 156 1 146 150 147 48.0 7e-36 MRIVLQKVSEGLVDVVDEVSGEVDATFEPQRIGVGYVLLVGVEDEDGTKQVDWLARKIAN LRVFEDENGKMNRSIHDVDGSVLSISQFTLYADVRKGNRPSFVKAGAPDHAEQVWHAFND ALRAQGLDVKEGRFGAHMRVSLTNDGPVTIIFDTDELGI >gi|148337400|gb|DS264459.1| GENE 96 106391 - 106978 573 195 aa, chain - ## HITS:1 COG:no KEGG:BAD_0969 NR:ns ## KEGG: BAD_0969 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 195 29 223 223 367 92.0 1e-100 MKNTETGKHVLIMPGIGYTVDRPLLYWAAQALAADGWFVDRLDLKLTEDVEFPEMIACME RVVDQWRAEALEHAAESGEEARLLVVTKSLSTLSYPHSAKLGLRVVLLTPVLNPPPFDKH KSIIPAPLPGAVGSPMPLICAGDADPYFDDAKAHLLTDHVRTFAGANHSIEVPDDWRTSL DYLKQVTQAIVDYAG >gi|148337400|gb|DS264459.1| GENE 97 107470 - 107712 66 80 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488691|ref|ZP_02029540.1| ## NR: gi|154488691|ref|ZP_02029540.1| hypothetical protein BIFADO_01998 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_01998 [Bifidobacterium adolescentis L2-32] # 1 69 56 124 135 128 100.0 2e-28 MQETAASGIDCFLMKMPANLAIFGINRADVVRSDIAGYSYDHWYIADHSLGGTLAANSTS ANIPTTGTDSSSSPPIQPPT >gi|148337400|gb|DS264459.1| GENE 98 107921 - 108094 91 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSMCVAILSRYRANTCMQPFEVKLRSQSSGADPVLVAYRKVETDCDRKWGQFKDCW >gi|148337400|gb|DS264459.1| GENE 99 108072 - 108446 451 124 aa, chain + ## HITS:1 COG:BMEII0787 KEGG:ns NR:ns ## COG: BMEII0787 COG3189 # Protein_GI_number: 17989132 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Brucella melitensis # 6 119 4 113 116 110 47.0 6e-25 MATHMLNIKRIYDNPADDDGYRILVDRIWPRGVSKERAKLDRWAKTEVTPTTDLRKWFAH DPAKFDEFKARYIEQLNSRPEAAQFADDVRNLLHDANITLLYAARDPHINHVVILRDWLL ERLT >gi|148337400|gb|DS264459.1| GENE 100 108569 - 112114 3490 1181 aa, chain - ## HITS:1 COG:SP0892 KEGG:ns NR:ns ## COG: SP0892 COG4096 # Protein_GI_number: 15900775 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Streptococcus pneumoniae TIGR4 # 75 1170 3 1078 1091 726 37.0 0 MQASFLWLTQTRNDWKNTGITPYASRGSGTMNSYGVFRGVMGLEGHIMSNFSFLLGQDDY EQFAIPCVEAEKAFSISPTMCAMATRKAFELAVKWVYAADRSIQMPYRDNLQSLIHEPTF ERAIGNQKMLDSFQYIVKAGNITVHGKTRISPKDAMFDLKLLFVFIQWIDYSYGKWYEKR VFDPKQVPCVQQALSRKEVQAKEDAAKQELAKELSAKTERIQELERQLEESRAALSVQKA PRPPMPDSEMDISEYETRQRFIDLDLRLAGWDVDSEAEVVKERKVTGMEDHEGQVGYVDY YLKGRDGKPLAIIEAKRTSYDPKKGLEQSRQYAKCLEREFGYRPLIFLSNGYATEFVDDE NGPSRPVGGVFSQDDLQRIMNRRREAIDPRTVPVNEKVAGRYYQIEAIKAFCDNLWKGKR RGLLVMATGTGKTRVSAALTDVLMRARLVKNVLFLADRVELVKQAKSAYGEYYPDWSLCN LCDNKHDVDARVVFSTYQTMIGAIDTETASDGKPAFSPGHFDLIIVDEAHRSIFKKYKDI FDHFDALVVGLTATPRDEVDRNTYDFFQAEHGVPTYLYEYKTAVERDHYLVPFYNIEAKT KFTDEGITYDDLSEEDKERYEDDFGEDDGEGGVEVPDHIDADALNRFVMNAGTVDAVLQD LMEHGIKTMGGEQIGKTIIFAQSQKHARFIVERFGALYPKLARGGFIKVVVHSEDYSHAI IQDFKRKTIPVITVSVDMMDTGVDVPEVVNLVFFKKVRSRIKFWQMIGRGTRLCEGLDCV DGIDGEYVDKKRFYIFDYCGNFEFFREQKNDADEKPVTSLSERIFSRKTELVHALQSSEF TSDENLMAWRDELVNDIHGQVASLDESKVSVRLRREYVEKYRNIKTFEHLSDIDVHDLTG EVAPLTHYDGEDEYALRFDALMYGLMVASVRGRTAARHKTKIRAIATRLKERMTIPQVKE RETEIKLVADNPDYLDGASLEKLERIRMTLRDLIRFIADSTARKMVITDLKDPVIDRSEG REFDTAEHYEDYKQKLNRYINEHSNDEVLRKLHYNEPLSGKDFSNLENIMIHELGSREEY QKAFGDVPLGLSVRRIIKLDHQATMKAFGEFINNHSLSPAQNALMNRIIDYVEQNGYVQP EDLARPPFDRPKPLFLVFGKELMDLKVCIERLNANAMAPIA >gi|148337400|gb|DS264459.1| GENE 101 112113 - 112286 86 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHNSREAVEKVEHSAKSRFIDLRDESSKLLLQLNRRQRHTETAKCLLVDFRHLRTAR >gi|148337400|gb|DS264459.1| GENE 102 112310 - 112468 71 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPNASLQPNKHDCIPPLLEELDMHPMSIPQKNQEAPLYLMMDVFCYKLDVQG >gi|148337400|gb|DS264459.1| GENE 103 112599 - 112760 190 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSINNRERFEWFDRPTVRIRLKISEHFDKPGFDESIKTAKLFANKTNLILKLS >gi|148337400|gb|DS264459.1| GENE 104 113255 - 114226 750 323 aa, chain - ## HITS:1 COG:SP0890 KEGG:ns NR:ns ## COG: SP0890 COG0582 # Protein_GI_number: 15900773 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Streptococcus pneumoniae TIGR4 # 1 323 1 321 321 351 56.0 1e-96 MQQTIERIDRLMAPMLNDEQASELHTVLVACLTEKGGNPRGPETMTECIDLFLAAKKLEG CSERSLRYYATTLSRFATEISRPAHDITTDDIRDYLTRYSRDGRVGKTTIDNIRRVISSC FSWLEEEDYIYKSPVRRIKKIRTSRMLKPVYSDESLEQLRDACKETRDLAMIDLLTSTGI RVGELVQLNRRDIDFDARECVVHGKGDKERRVYFDARAKTHLLVYLEQRMDDEPALFVSL HRPFKRLEISGVEARLRKLGDDSGVKHVHPHKFRRTLATKAIDKGMPIEQVQVLLGHSKI DTTLCYAQVDQDNVKRSHRKFIS >gi|148337400|gb|DS264459.1| GENE 105 114313 - 115500 580 395 aa, chain - ## HITS:1 COG:MA2415 KEGG:ns NR:ns ## COG: MA2415 COG0732 # Protein_GI_number: 20091246 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Methanosarcina acetivorans str.C2A # 14 393 9 387 391 90 23.0 7e-18 MTDKPQFVGKKVTIGELGKTQSGGTPSSKHPEFFNGSIPWIGTTALNGKFLGKNDAVKLI TEEAVAKSATKIVPEKSIMVGIRVGVGKVAINAVPMCTSQDIVSIVGIDEASWNKEYISL ALQYKAPLLAAQAQGATIAGITSKTLKAIEIPAIPINEQNRVVDILRKLENQVGFVRKQL CGLDALVKSRFVEIFGDFACYETKPLIKCVDCIEAGKSPKCLAFSRKMAEPGVLKLSAIS SGVYCENENKALPRSVSLTIDKVVHANDILLSRKNTPELVGRSVLVKHTDGNIMFPDIIF RMHPLPPINAMYLSYLLAGPLLHSIQSLAHGSAKSMSNIPKSELAKLSIPIPALNLQNEF ANFVSQVDKSRFVAQQQIEKLQMLYDSLAQEYFGD >gi|148337400|gb|DS264459.1| GENE 106 115493 - 116971 1489 492 aa, chain - ## HITS:1 COG:SP0886 KEGG:ns NR:ns ## COG: SP0886 COG0286 # Protein_GI_number: 15900769 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Streptococcus pneumoniae TIGR4 # 1 486 1 496 497 481 51.0 1e-135 MITGATKNKVDDIWQRMWEGGVTNPIEVIMQLTYLMFMKSLDDKELEAENMEMLGMTAKH VFPQTEEGQAIRWSRFKDLPAEQMFDVVSQKAFPFIKTMHSDNAFAESMEDAAFGFNKPK TLEKAVSGIDELLSNYVQDADDLGDLYEYMLSKLNTAGTNGQFRTPQHIRNMMVALAGPK PGQLICDPACGTAGFLISAAESIRKNHGQEMTEEQWKTFSGEQFTGFDTDQTMVRISAMN LLLHSIDHPDIRNQDSLSRLNTIRDKFDLILANPPFTGSVDVEDIDDSLKAVVETKQTEL LFVALFLRMLKLGGRCVCIVPNGVLFRSNSKAYRQLRAELVDNQRLEAIIYMPSGVFKPY SGVSTAILVFTKTDAGGTDKVWLYNMEGDGYTLDDKRDPDEKHNDIPDILERWGNLDAEE QRARTDKSFLVPKSEIAENDYDFSFNKYAETKYERIEYPPTEEILADLDDLNRQMTESLA ELHKMLGGGQND >gi|148337400|gb|DS264459.1| GENE 107 117082 - 117381 90 99 aa, chain - ## HITS:1 COG:no KEGG:Calkro_1118 NR:ns ## KEGG: Calkro_1118 # Name: not_defined # Def: NERD domain-containing protein # Organism: C.kronotskyensis # Pathway: not_defined # 1 92 115 206 216 62 38.0 4e-09 MRQNYGHIQCLKELLGLEDSVFISIVCFANRTKFKVKTHSDREFVVHTNDLRSTVLDHPQ CMGPDMNAVADRLESLNIIDKAVRHEHIRDLQNTYSGKL >gi|148337400|gb|DS264459.1| GENE 108 117233 - 117709 139 158 aa, chain - ## HITS:1 COG:no KEGG:Apre_1118 NR:ns ## KEGG: Apre_1118 # Name: not_defined # Def: NERD domain-containing protein # Organism: A.prevotii # Pathway: not_defined # 2 116 7 120 255 77 37.0 2e-13 MTIWYVAIVLPILILATIVTIWGNQITGKAGEHWASEELRKLPQSEYRLLNDLVLKDSTG LHQIDHVVVSVYGIYVVEAKNYTGTIYGDSKYSEWFMYLGKNKRKNPFAFAAELRAHSMF EGIIGIGRFGFHFDCMLCESYQVQSEDSLRSRVRGAYE >gi|148337400|gb|DS264459.1| GENE 109 117998 - 120163 830 721 aa, chain + ## HITS:1 COG:Cgl1599 KEGG:ns NR:ns ## COG: Cgl1599 COG0553 # Protein_GI_number: 19552849 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Corynebacterium glutamicum # 37 703 238 883 892 326 33.0 1e-88 MPGIQKTLDGIATSDVIYRDSIQQEANCYVAAQVLKLMEKIPVEEVNRDKRGIRVKALRD SGYVMYADILTASIYQLAAVRGISEDGARIIKRIVGEAADNASATTKLQLSADNRTEDTT RLIIAVSQYQQAKPLADKSSRLSQQYSGTIQNALEGLKVSAGTFRWLFASRQEKQNAIEL YKLLDETLHGEYGQTAERLRVESDAIESLSEDDAWDSFKKHPISYANTLEEIVPGLLGNG DTVYGLPKDLAREVQEECFFPDGLLCDLRRYQEWGVKYILHQKKVLLGDEMGLCKTIQAI ATMVSLRNTGATHFIVICPASVIVNWCREIQKFSKLRVISVHGFSRESALEDWQRTGGVA VTTYETTAYFKFSDDFTYSLLVVDEAHYIKNPSTNRSKNTKAIAEHAERLLFMTGTALEN KVDEMINLIKLLQPSIAMQISGMKELSSAPQFRETVAPVYYRRRREDVLTELPELSEIKE WCQLGDSEERKYEETVFSKNYNAIRRVSWNVPDLKDSGKAKRLLEIIEEAKSEGRKVLVF SFYLDTIRKIADMLGSQCTEPINGSITPTRRQEIIDDFDKAPAGQVLVAQIVAGGTGLNI QSASVVIICEPQLKPSIENQAISRAYRMGQARNVLVYRLLAENTIDEKITDILARKQEVF NAFANESAAAENVEVDEKSLGNIVQEEIDRINQKRNGMETSTGTVEVIAVDSNRSQGNNR D >gi|148337400|gb|DS264459.1| GENE 110 120069 - 120290 166 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|229817495|ref|ZP_04447777.1| ## NR: gi|229817495|ref|ZP_04447777.1| hypothetical protein BIFANG_02758 [Bifidobacterium angulatum DSM 20098] hypothetical protein BIFANG_02758 [Bifidobacterium angulatum DSM 20098] # 1 42 76 117 130 74 73.0 3e-12 MRDWIAHDYDESDCDWLYYAVTHEIPQVFAILQPYVECQTQVPNRDCFLGSDCCPQRSLL RFPSTFPYHFVFG >gi|148337400|gb|DS264459.1| GENE 111 120354 - 120485 90 43 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488702|ref|ZP_02029551.1| ## NR: gi|154488702|ref|ZP_02029551.1| hypothetical protein BIFADO_02009 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02009 [Bifidobacterium adolescentis L2-32] # 1 43 14 56 56 84 97.0 2e-15 MLIVRAFKDAQWFFGPLGAEEFADNDEKAECRCHSDCTSGGAS >gi|148337400|gb|DS264459.1| GENE 112 121324 - 122103 607 259 aa, chain + ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 1 256 1 255 262 211 42.0 1e-54 MKVAVGQFTVTEKPEHNINIISGFASEAARNHTRILLLPEGLIARSDDDPHYTADHAQTI DGPFVTALRGISEANNIAVMGTVHLHEDTVDLPYNCFLVIDHGRILLEYRKIHLYDAFGE RESDSIAPGHEVPPLVDIDGWKFGVMTCYDIRFPELARRHAVAGADALVVSAAWARGEGK VDHWTTLCKARALENTCYLMACSEHSGHDIGHSMVVDPAARILAQSGERDELIYADLNRD RLEDVRRILPVLKNRRITL >gi|148337400|gb|DS264459.1| GENE 113 122144 - 122800 785 218 aa, chain - ## HITS:1 COG:Cgl1054 KEGG:ns NR:ns ## COG: Cgl1054 COG4721 # Protein_GI_number: 19552304 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 17 218 1 199 201 99 34.0 4e-21 MAEPSSETITQKPRIPMLKHAPQTTEETRRSLKWRVVDIAVGAAVGVMSGVMFWVFDGMS YGLFPLLTLILPGSAALLHALFYFPATLGLLIVRKPGASAYVLLVASFVEVVLGTKYSVS LVVIALVQALAAETVFAVFRYRRWTLGVTLLSSVAIGIVYNFYLLFFYYQAFSFFSPRGL IGTACELLSAAVFAGFGSWGLYRALAKSGVLARFSSGQ >gi|148337400|gb|DS264459.1| GENE 114 123093 - 123845 841 250 aa, chain + ## HITS:1 COG:lin2536 KEGG:ns NR:ns ## COG: lin2536 COG1434 # Protein_GI_number: 16801598 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 71 243 9 180 189 104 37.0 1e-22 MKTMARQIGTVLCMALALLSAFYAFAVMKTHSGTGFWKVWLVIAAVFALLAVGIAANWWV ALPRIIRGVIIAVVCIGIAIFGTVEGCIISNMHARGDQHLDYVVVLGAQVRKSGPSKALR YRLDTAADYLRNSPDTICIVSGGKGANEPFPEAQGMADYLKAHGIEEGRILQESKSKTTQ ENIVNSKKLIAGDNASVGIITNDFHMFRALQIAHDNGLDEAQGIAAGSPPDMLVNNMVRE FFAEIKFLLS >gi|148337400|gb|DS264459.1| GENE 115 123909 - 124541 519 210 aa, chain - ## HITS:1 COG:lin2013_1 KEGG:ns NR:ns ## COG: lin2013_1 COG0847 # Protein_GI_number: 16801079 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, epsilon subunit and related 3'-5' exonucleases # Organism: Listeria innocua # 5 157 6 160 260 80 36.0 2e-15 MNQGFAVVDFETTGLSPAKGDRAIEIGLVHVAPDGTLEDEHETLIHVDRSVGASWVHHIT ARDLLHAPDFEGIAHELRDLLAGRVFVAHNVSFDSRFLLAEYSRMGASIPVHQSTMLCTM KLSRSLIGRGKLSDCCDYFGIANEDAHSALSDAHATALLLGRLLEADPNWPGFQRRLESA ADAAEQWPTFAALPKGQWLPRGTHAAAHAS >gi|148337400|gb|DS264459.1| GENE 116 124677 - 126041 1933 454 aa, chain - ## HITS:1 COG:ML1481 KEGG:ns NR:ns ## COG: ML1481 COG0544 # Protein_GI_number: 15827779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Mycobacterium leprae # 1 448 1 462 469 240 36.0 4e-63 MKISVRNLEPTKVKLTVTVDPEEFNPYLDEARKEIAKQVNVPGFRKGHVPGKIIDQRIGF GAVAGEAVNNGVPELYSKALETKKIHPMAQPEIDVQDVPESAKDETKLKFVATVERRPDI ELPALDGMEIEVAKAEVTDEDINNRLEALRQRFGTLVSVDRPAAKGDYANIDLNAEIDGE TVDSQEGVSYELGSATMLDGLDEALEGLSAGEETSFEGTLEAGKHEGEKALIKVKVNSVK AEELPELDDDFASEASEFDTLDELKEDLKKVAAQDAEGRQATAARDAFIAKLEDGLEIPV PKGVKAEMVEQQLKNVTADPSKATKEQKAEAEETVEKELRDQMVLDVLAETMDVKVSQGE VFNFLASIAQQYGMDPNAFIQAIIRNGQIGSAVQEVGRSKGLLSGMRAVTFKSEGETLDL SAFLGSAAEDEESESVEAASAAAAVADELASDEK >gi|148337400|gb|DS264459.1| GENE 117 126094 - 127389 1337 431 aa, chain - ## HITS:1 COG:ML1040 KEGG:ns NR:ns ## COG: ML1040 COG0349 # Protein_GI_number: 15827504 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Mycobacterium leprae # 4 430 15 424 429 209 34.0 8e-54 MTDDPKLLAEPREGVPNVIDTLPAFRDYCSELASSHGSLAADAERASGFRYGHEDWLVQF KRDGAGIGLLDPQALAAAGADWNDFNRAVGDAVWILHDSLQDLPGFDELGMEPQRLFDTE IAARLLGLKRFGLAAVTEHFLGLTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELETK MRAELKRQGKMEWAQEEFDYALKEGLGPRKEHLIPWMHVSHITEVMRDRQALAIVRALWT RRDELAREYDIAPTLLLSDSSIIEVAKRKPHNAAQFRSIRSINERVRIHTDSEQDKMFER YAPIQRKIKPSMWKNIIQDALALPPSEWPDVDGGAARRHESQSASAPKSIRVWKERYPER LQVLNRVRKAVSQIAEDTRTPVEIVIKPQYLRNLCWTDEPRKRDVARFLSEQGARDWQVS LVAESVSRAIM >gi|148337400|gb|DS264459.1| GENE 118 127382 - 128014 557 210 aa, chain - ## HITS:1 COG:no KEGG:BAD_0990 NR:ns ## KEGG: BAD_0990 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 210 1 210 210 424 99.0 1e-118 MADIFDFPRDARNVARADGKGADMGGEAPQTMLMRPQGVPDQVWNAVLSVDCMRRLKGMT YREIPVPNSMANFGIGVALECDETYASGWIMILYSLKFREDWHSHWRCVAFASLPLPDKE DDCLTPGMYWDMMMERLNPNDSEHVSGTVTVTQNTAFGHDPDVPRVGCEIRVSWTPLDYA DGGLDAGSQVGQWASFLRSMTQSEEENPVD >gi|148337400|gb|DS264459.1| GENE 119 128098 - 128205 70 35 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488714|ref|ZP_02029563.1| ## NR: gi|154488714|ref|ZP_02029563.1| hypothetical protein BIFADO_02021 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02021 [Bifidobacterium adolescentis L2-32] # 1 35 1 35 35 63 100.0 6e-09 MNKLVHAIDSVGGMDQYEAFRISSEYGEAIERTGV >gi|148337400|gb|DS264459.1| GENE 120 128202 - 129080 1018 292 aa, chain - ## HITS:1 COG:VC1869 KEGG:ns NR:ns ## COG: VC1869 COG1180 # Protein_GI_number: 15641871 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Vibrio cholerae # 52 287 4 243 246 199 39.0 5e-51 MSEHIFRSTTRHMLRDSKDYVNQTLMGGLSGFESPIGLDRLDRIKALKSGDIGFVHSWDI NTSVDGPGTRMTVFMSGCPLRCQYCQNPDTWKMRDGKPVYYEAMVKKIERYADLFKATGG GITFSGGESMMQPAFVSRVFHAAKQMGVHTCLDTSGFLGASYTDDMVDDIDLCLLDVKSG DEETYHKVTGGILQPTIDFGQRLAKAGKKIWVRFVLVPGLTSSEENVENVAKICETFGDA LEHIDVLPFHQLGRPKWHMLNIPYPLEDQKGPSAAMKQRVVEQFQSHGFTVY >gi|148337400|gb|DS264459.1| GENE 121 129218 - 131593 3376 791 aa, chain - ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 14 786 9 770 772 833 55.0 0 MAAVDATAVSQEGLEAKAWEGFTEGNWQKDIDVRDFIQKNYTPYEGDESFLADATDKTKH LWKYLDDNYLSVERKQRVYDVDTHTPAGIDAFPAGYIDSPEVDNVIVGLQTDVPCKRAMM PNGGWRMVEQAIKEAGKEPDPEIKKIFTKYRKTHNDGVFGVYTKQIKVARHNKILTGLPD AYGRGRIIGDYRRVALYGVNTLIKFKQRDKDSIPYRNDFTEPEIEHWIRFREEHDEQIKA LKQLINLGNEYGLDLSRPAQTAQEAVQWTYMGYLASVKSQDGAAMSFGRVSTFFDVYFER DLKAGKITETDAQEIIDNLVMKLRIVRFLRTKDYDAIFSGDPYWATWSDAGFGDDGRTMV TKTSFRLLNTLTLEHLGPGPEPNITIFWDPKLPEAYKRFCARISIDTSAIQYESDKEIRS HWGDDAAIACCVSPMRVGKQMQFFAARVNSAKALLYAINGGRDEMTGMQVIDKGVIDPIK PEADGTLDYEKVKANYEKALEWLSETYVMALNIIHYMHDKYAYESIEMALHDKEVYRTLG CGMSGLSIAADSLSACKYAKVYPIYNKDAKTTPGHENEYVEGADDDLIVGYRTEGDFPLY GNDDDRADDIAKWVVSTVMGQVKRLPVYRDAVPTQSILTITSNVEYGKATGAFPSGHKKG TPYAPGANPENGMDSHGMLPSMFSVGKIDYNDALDGISLTNTITPDGLGRDEEERIGNLV GILDAGNGHGLYHANINVLRKEQLEDAVEHPEKYPHLTVRVSGYAVNFVKLTKEQQLDVI SRTFHQGAVVD >gi|148337400|gb|DS264459.1| GENE 122 131742 - 131951 267 69 aa, chain - ## HITS:1 COG:no KEGG:BAD_0993 NR:ns ## KEGG: BAD_0993 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 69 29 97 97 112 100.0 6e-24 MEKQWYFNTVTEQPELGMISPASHRMGPYRTREDALDAWKIVQERNLKWEEQDREWKRWS ADGSASSEK >gi|148337400|gb|DS264459.1| GENE 123 131995 - 133692 2288 565 aa, chain - ## HITS:1 COG:mll0818_2 KEGG:ns NR:ns ## COG: mll0818_2 COG0171 # Protein_GI_number: 13470971 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mesorhizobium loti # 259 565 2 297 299 272 48.0 2e-72 MTDIRFALAQIDTCVGDLDSNADKVMRYAHLAAQQGAQVVVFPEMTLTGYPIEDLALRAT FRKAAWDKANWLATELASDSLGELYVVVGTVGTDRETSKPRNRLVVLHDGVVWAGYDKHF LPNYGVFDEFRIFSPGNKSMVLDVNGARIGVAICEDIWQDGGPVAELAKENIDLLLTMNG SPYEEGKTDTRLDLAVRRAAEVNAPMIYLNQVGGQDDLVFDGGSFVVDTDGSLLERSPMF MEDLSFFDLDTSAEHQKVGTIAAKPDPDEEVYTACVLGLKDYMAKNHFKGVCLGLSGGID SALVAAMAADAVGGENVYGISMPSMYSSDGSKDDAADLARNIGAHYDIQPIEPLFVSFQN QLELEGVAAENLQARIRGVIVMAYSNSKGLLAVATGNKSELACGYSTIYGDAVGGYAPIK DLLKTRVWEISRWRNKAAAAGMGIGGLHVVGNEQGSAGTPLPDGVMIPVNSIEKAPSAEL RPGQKDSDSLPEYALLDQVLAMYIEHAHGRADLLADGFDEATVDTVMRLVDRAEWKRRQY PLGPKVTALAFGRDRRLPVTNAFRE >gi|148337400|gb|DS264459.1| GENE 124 133778 - 134947 1368 389 aa, chain - ## HITS:1 COG:L182020 KEGG:ns NR:ns ## COG: L182020 COG1473 # Protein_GI_number: 15672938 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Lactococcus lactis # 17 388 9 378 379 300 42.0 3e-81 MCLQSSTMSEHIEITPEIIEIRHYLHAHPERSFKEYETSAYIEKLLRAHDIEVLNNPLET GVVGLIRGDQPGPRIALRADIDGLPIQEDTGLPFSSVNDGVMHGCGHDLHMSYMLGAAFW LAKRRKRIRGSIKLLFQPAEELGLGAKAMVDAGLLADVSAAIGAHNNPNYSPGQIAVGPE PMMAGCVKFHVTLHATGTHAGYPHKGTGPIEALATMVLALQTIVSRNVSPFHPLVLSITE MHGGHVWNVVPDKASFQGTVRYFHKSDGELVGKRFKQQVQSIAAGYGITADIDWDDFQNP LVSDTELSKIVADNVRDYAQLEPIHPSMAGEDFCDFMPVTMPVFAFIGSNGEEGCPDWHS PHFVGLDESLQAGVEFYANAALTVLNELS >gi|148337400|gb|DS264459.1| GENE 125 135037 - 135858 931 273 aa, chain + ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 13 273 3 256 256 135 35.0 1e-31 MVFHGGSMAQDIKTAFFDIDGTLTSFVTHVVPQSTVDALHALQRNGVKVFICSGRAPSYM GVVLDTIPVTFDGIVGLNGQYCTTRDGLDYRHPIDQADVKLITDWLETHADVVANYAESD YGYFNRTNAALERTWNSLGKTAPKIDVHDPRERIANHSTFQISPYVDETMEAEIASMCSN VRGVRWHPAFTDLIPADGGKAVGMQVMLEHFGWTKDNAIAFGDGGNDVDMLRFAGIGVAM GNATDEPKAAADYVTDSVDDAGIANALKHFGVI >gi|148337400|gb|DS264459.1| GENE 126 136057 - 136902 1437 281 aa, chain + ## HITS:1 COG:PA5505 KEGG:ns NR:ns ## COG: PA5505 COG1464 # Protein_GI_number: 15600698 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Pseudomonas aeruginosa # 4 281 2 260 260 254 52.0 1e-67 MRNKKILGALLAVTTLATFGLAGCGNSGSNGAASKEDDKTITVAASPTPHAEILNKAVKP LVEKDGYKLVVKEFTDYVQPNTATEDGEVDANYFQHKPYLDNFNKEKGTHLVSVEGIHFE PFGLYPGKTKELKDLQDGATVAVPNDATNEARALLLLQDAGLIKLKDPKDINATPKDITS NPKNLKFKELEAAVVPTVIKDVDIAALNGNYAIQAGFDPTKDTLATEKADGLAAKTYQNI LVVKEGNENTAKTKELKKALKSDEVRDYINKNYKGAVVPVF >gi|148337400|gb|DS264459.1| GENE 127 136990 - 137814 1078 274 aa, chain + ## HITS:1 COG:HI0621 KEGG:ns NR:ns ## COG: HI0621 COG1135 # Protein_GI_number: 16272563 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Haemophilus influenzae # 3 242 2 241 345 251 50.0 1e-66 MTIQIDHLHKSYGSGAEAHEVLHDINLTIDSGEVFGILGSSGAGKSTLVRCINLLERPTS GKVLIDGRDITGVKGKELADVRAGIGMIFQNFSLFQQRTVLRNVTFPLELNHTPKAKREE RARYLLDLVGLADLADRYPSQLSGGQQQRVAIARALANNPSIMLCDEATSALDSTTTAQI LDLLRRINRELNVTLVVITHSLSVARNICDRVAMIDGGRIVEMGDTEALFADPHSDILKT LIADAKVTNHRHTHETADGAKNGAADDSAQKEVK >gi|148337400|gb|DS264459.1| GENE 128 137816 - 138496 1150 226 aa, chain + ## HITS:1 COG:VC0906 KEGG:ns NR:ns ## COG: VC0906 COG2011 # Protein_GI_number: 15640922 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Vibrio cholerae # 5 223 6 224 225 177 52.0 1e-44 MGQVVSQFIADYGELLVEGVRDTIIMTAVATLLAYVIGLPVGVLLITSAKKGIRPNAPLN TVLGWIVNIVRSVPFIILLVAIIPLTRLIVGTSLGVPGAIVPLVITAAPFVARVVEQSLA EVDGSLVEAAQSFGASNLQIVFKVLLFESLPSLVRGAALTFITLFGFSAMAGTVGAGGLG DIAIRYGYQRYQYDVMTVAVILCVILVQIVQTIGDVVSDHIDHHER >gi|148337400|gb|DS264459.1| GENE 129 138592 - 139041 200 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42519249|ref|NP_965179.1| 30S ribosomal protein S21 [Lactobacillus johnsonii NCC 533] # 1 148 1 147 147 81 31 5e-14 MSMKDTLKKAKIAAMKAKDKAKLNPINLTLADIQNLEIANGHEATDEEVLKVIQKGVKTR RETAKLYEDKGLADKAAPETAEADFLETFLPAAASDEDYAKAVADAVAEVNPAGPKDMGR VVKAARAALAGKTIDGGKLAGLVKAELNK >gi|148337400|gb|DS264459.1| GENE 130 139165 - 139320 97 51 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225352307|ref|ZP_03743330.1| ## NR: gi|225352307|ref|ZP_03743330.1| hypothetical protein BIFPSEUDO_03923 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_03923 [Bifidobacterium pseudocatenulatum DSM 20438] # 1 51 1 51 51 84 88.0 3e-15 MTTVIMRTSEGDMRVMFLLWDATSGNKSLKIVEIPIKTAPRALNNPDFPEK >gi|148337400|gb|DS264459.1| GENE 131 139425 - 140765 1128 446 aa, chain + ## HITS:1 COG:MT2735 KEGG:ns NR:ns ## COG: MT2735 COG0582 # Protein_GI_number: 15842199 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium tuberculosis CDC1551 # 4 396 16 378 386 102 26.0 2e-21 MANGDRKRRKWGCVVACKDADGSIVSWQARYQSPVNPRQRIYRRFGLEFQAEAYRWLDEE HALVIDHKKGIRKWTHPSARTMYGKVLFASYATTYVSNLRKKDGSELSGRSKRIQKAALD KLLPWFGETPMRDITEEFVNEWYARACDEVRPSALEHAVWLLKRVMRAATERQPDGGPPL LSSNPCNLVTRKRQSKRRDQAPMTKQEIDALVEGFPEYDRLSVHLALLVGGLRIGEVCGL QLRDIDLEHGLLYVRHSVTQGPDDLGAYRLDETKTPESRRVVPIPAPVCRLIREHIDRFC PNRNPDTMLFHAPRHPERVLNPTTIQRQFRTARKRIDREDVTFHSLRATHATMFMIQGGT LRETMDELGHVDVDVAVRCYQRVVPRHRRDVVERLALEYLPAEEPAGIKAQIAQKEEEID QLRQTVAKLRRRLDELEGEEEVGATG >gi|148337400|gb|DS264459.1| GENE 132 140850 - 141464 342 204 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488727|ref|ZP_02029576.1| ## NR: gi|154488727|ref|ZP_02029576.1| hypothetical protein BIFADO_02034 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02034 [Bifidobacterium adolescentis L2-32] # 30 204 1 175 175 338 100.0 1e-91 MRRFNPGNFYCGTTAEWTSCPRPVRHPDHMSGLGSDYWYGESGVVRYSDHWGSEVASCDW YLDGVARCSFDDHDGWRCGFAPWTEFELKTFEVTVYHPDLLPSESAAALGDPVRSGVAPA WRPGMADIPYASYRVRPDMIVDGCVVVAGTYGDCGTPFDGRCLMSVDVSDWTEEERVAWT EAFPADPVFPSLPDMFGDDYGRCR >gi|148337400|gb|DS264459.1| GENE 133 141461 - 142183 604 240 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488728|ref|ZP_02029577.1| ## NR: gi|154488728|ref|ZP_02029577.1| hypothetical protein BIFADO_02035 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02035 [Bifidobacterium adolescentis L2-32] # 1 240 1 240 240 451 100.0 1e-125 MVGFTIPRAFVSMDPWSGTLLVGMPRGVTLPDGRDVGGYSLRKYADEREKTDWRGEEGIR VTLDDGFPARLQRGRGDDVEAVFVDASVLADAVKTRLDSALRAVEDMDWTPDFGFDVEDS VRLDRCPECFDPDRIDRSAGLHAYYETEDGGWLRLTSRSWFDPNLGDFDQVCVDYVSAAG VMVSVKDTACLDAEPPARIRMKVSDLVERAGGSVRGGFDPTNMADPTNMAGASDEGSFTL >gi|148337400|gb|DS264459.1| GENE 134 142198 - 143103 730 301 aa, chain - ## HITS:1 COG:no KEGG:BAD_1255 NR:ns ## KEGG: BAD_1255 # Name: cysD-2 # Def: sulfate adenylyltransferase, subunit 2 # Organism: B.adolescentis # Pathway: not_defined # 1 301 117 433 435 310 55.0 5e-83 MSGKGEWVNLRFPNAFAHPFSFQGRDGGTRERMLVTIPKGVVLGDGRDVGGWNLSVRATP WALAQKRAGRPVSIGLRVGRTVELFKGRGPRRVTLRLDGPEGLRSALDEHRNVMSARVAV PADPGRGCRGSLDDAAPPMDGPAGDEGMLLFNDLAFDSGFVARMDTLASRFADDFAHGRY DAGTALRETRSLVAEAAMLMETVTGASYGAGAADCAASLALSAVTDAVNGYVDDLVDRND CDPRVAAANHAERSADPHARPGTLPCLRMFTTAYGKTDETDVFGDGAPVEGMESSSMQLT R >gi|148337400|gb|DS264459.1| GENE 135 143100 - 143531 445 143 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488730|ref|ZP_02029579.1| ## NR: gi|154488730|ref|ZP_02029579.1| hypothetical protein BIFADO_02037 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02037 [Bifidobacterium adolescentis L2-32] # 1 143 6 148 148 250 100.0 2e-65 MSDCIDDRIEGNFVFLAVRATDGSGRRAGVDLPMDPDELARFEGEQGLMAPSDYRIDGYS KDGIVGRMGFAPFRDDSPLEDVNLLCRAVDAASRSDPHAADKVAAWAECWEVDDPRVLAG VAVRSAADPTNMAVTAAESGRAL >gi|148337400|gb|DS264459.1| GENE 136 143543 - 144097 670 184 aa, chain - ## HITS:1 COG:no KEGG:BAD_1255 NR:ns ## KEGG: BAD_1255 # Name: cysD-2 # Def: sulfate adenylyltransferase, subunit 2 # Organism: B.adolescentis # Pathway: not_defined # 12 120 124 233 435 84 39.0 2e-15 MAQEDSRQEGRRAERWARVNFPNKFVHPHEYTARDGRVFDKMFVSIPPGVTLNGVDLGGY AFDHFAKPREIEQKANGRPVAINFRPGEPVRLFRGVGPERRTLEISNPWDLCRAVKAHND EYARSRQEAAAMSAEASQARGAAGGADEFDTFGEPADVQDGYLPGDPADPTTMLDPSSGM GATL >gi|148337400|gb|DS264459.1| GENE 137 144406 - 144714 312 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488733|ref|ZP_02029582.1| ## NR: gi|154488733|ref|ZP_02029582.1| hypothetical protein BIFADO_02040 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02040 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 209 100.0 5e-53 MFVANYNCIVRKANKDDEPLILPSAFKHGVSENDILHAWREARGPVDINYDRDPPTYMYV GPGVSGAVWYEIGTASRAGYDVELIVHAMKARKGYLRKEGLR >gi|148337400|gb|DS264459.1| GENE 138 144711 - 145019 409 102 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488734|ref|ZP_02029583.1| ## NR: gi|154488734|ref|ZP_02029583.1| hypothetical protein BIFADO_02041 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02041 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 157 100.0 2e-37 MRFEDLPKAERDALAEYGYEVAAEMEAMDEPAPGDPTLDPRYDPSRELRRLNYQRHALDR EIEAAVAASRGHGQSWNTIGRALGVTAEAARRRYGVRAAARV >gi|148337400|gb|DS264459.1| GENE 139 145081 - 145821 913 246 aa, chain - ## HITS:1 COG:no KEGG:BL1465 NR:ns ## KEGG: BL1465 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 8 217 7 215 361 95 36.0 2e-18 MAGEGNWYDLRVYVGNIGRYNEGSLVGGWATLPMGRDDLDAFLRDRVGIDGERYEEYRID DFDLPDWLPAGPGERVVDERTSLEDLNVMAGVLSTLDEDDAAKARIWIEEGMSPAGRLSP LVFANVALQADDIPFYAYEAGTRFDPGISSNEEAFALTAAENDPELAEALDGRFGPYLNL EAIGRDLAMDCTLHDDGYLDRSVDPGIDPELYSRDELVCLAGLDGGSNDACVMSGLDGPM DKAVVR >gi|148337400|gb|DS264459.1| GENE 140 145932 - 146684 791 250 aa, chain - ## HITS:1 COG:BH0335 KEGG:ns NR:ns ## COG: BH0335 COG2801 # Protein_GI_number: 15612898 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 20 243 33 256 261 218 48.0 8e-57 MIEHPEAERVDPIAGDVHAIWRDSHERYGARKIKAALERRGVTASRRRIVNIMKRRGMTS AYARRTFKPHKTRVNEARLANILDREFDGYEPRTHLASDLTYVRVGGKWAYVCLLIDLAN RSIAGHSADTGRTADLVMAAFATLDFPLTEVEVFHTDRGSEFDNAKIDELLDVFDIRRSL SRKGNPYDNAVVESTNRLLKKELIYRNHYTSLEQLRSDLNDYVWWFNNQRLHSTLGYRSP KEFTEQGLVL >gi|148337400|gb|DS264459.1| GENE 141 146768 - 147055 414 95 aa, chain - ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 8 95 7 94 94 81 56.0 5e-16 MADPKHPRHYEESFKRQIVQLYENGKPAREIKDEYDISHSTLHRWVQGIRNSGSTKAADN RTPEQNELIELRKRNRQLEMEVDVLKQAALIFARK >gi|148337400|gb|DS264459.1| GENE 142 147071 - 147241 93 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSSTYRLACSIAASSVASVNGFGGFVLPSETEDSLTGLNEMDWLQCIRQSDEGRMT >gi|148337400|gb|DS264459.1| GENE 143 147210 - 147890 587 226 aa, chain + ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 1 150 489 642 709 94 33.0 2e-19 MEHASRYVEDKDLKAALDDDESHSGGIGTPATRADVIEKLVHAGYMERKGKQLHSTEAGR TLVDVVSPRLRDVSLTADMERSLGDVEHGGAHADAVYEEFRGYARAIPADAAANVKAERV GQSGGKTESYGRCPRCGGNVVKRGKTWTCSTNRNEKQADGTWKRTDGCGYRIFPTIAGKT LTDAQVRKVLGGQAVLVKGFTSKSGKKFDARLVADKERGVAFDFGK >gi|148337400|gb|DS264459.1| GENE 144 148101 - 148562 291 153 aa, chain + ## HITS:1 COG:no KEGG:BAD_1269 NR:ns ## KEGG: BAD_1269 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 5 151 17 164 167 145 50.0 5e-34 MRNGKAFPHRVSAMIGNEQYEHLKKESEAHGYQIALIERWMLIPQNVDDLYAGSLDDADR MMRRPLPSGTRGGGKRRCRECDFWLTDAGYEAVTRCAVKRGLIRSAYVAEVIHEQVRIAN ESGWPLPDGITNESVEREILGLLRSLEESSSAL >gi|148337400|gb|DS264459.1| GENE 145 148972 - 149370 328 132 aa, chain + ## HITS:1 COG:no KEGG:BAD_1270 NR:ns ## KEGG: BAD_1270 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 2 123 15 136 145 141 60.0 7e-33 MGRNQQHRTGRTRGRRIFIRVSDQEFEEIRASADMNGVSVSRYLVEAHETCTDLEAAKKK CEMAPIVEKLEAIRTEIWHIGHNVNQIARNTNRDMSASMDDEHSAAKAVRDCARLFVQAS DTIKRLSDQIGR >gi|148337400|gb|DS264459.1| GENE 146 149589 - 150065 -8 158 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488743|ref|ZP_02029592.1| ## NR: gi|154488743|ref|ZP_02029592.1| hypothetical protein BIFADO_02050 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02050 [Bifidobacterium adolescentis L2-32] # 1 158 174 331 331 320 100.0 2e-86 MDASFTQAMEKSYKRLHEYEETRRVWKYRILVLSCLLTASLLVLVAAMAFNWWSGLIRCI GAVALWGPFLVLTVVLLRAPKLSEEGGTVNQTAPKMEAESHLDKTVADEPARAERHDVHH HAMRILRYLSVFLFAFSLTGLAHSGKRSDPNHRVRGRC >gi|148337400|gb|DS264459.1| GENE 147 150803 - 152158 930 451 aa, chain + ## HITS:1 COG:no KEGG:BAD_1272 NR:ns ## KEGG: BAD_1272 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 419 4 422 451 645 77.0 0 MIPKISRGSDPAGLVKYLFGKGRHNEHANQHLVACSDDLLDSFGFDGHPDESYAKIGERF DRRYRIRERKGDPFPRDRRGRLNPGGEHGKDRVWHCSLSIKAGQGILTDGQWEAIVRDYL ERMGILDGDAPAGVTWLAVHHGLSRNGNDHVHVMVQLATDDGWINTYNDMKAAQRSCRGM ERKRPELVEIGRSNTESQVRYKYAEWRRWAEWKAQEDYDGPLPWHALDGDERVRRIAAVA AETMPKQHVGRVVEACAKASRSEDEFIRRVRREGFSIDPHLRKGAARDSFDSPDQVVGYR ITWRSRDGWTERFNATDLGADMRLKELRNGWTHDARSESLAVQEWRASMENRPPFLADGL ERRPANLSTHDMERLIDEAFHVAVNVRRGEGDPEAYDEALREGLRVFDRLSERYGLGDGF SAEIMKDELSAETPDAIGDDGRDENGKAHKP >gi|148337400|gb|DS264459.1| GENE 148 152174 - 153202 1054 342 aa, chain - ## HITS:1 COG:no KEGG:DSY5047 NR:ns ## KEGG: DSY5047 # Name: not_defined # Def: hypothetical protein # Organism: D.hafniense # Pathway: not_defined # 3 309 11 310 324 153 32.0 1e-35 MALIDFEGCEKSRRFYAGNAGRKVGVVWNGGNWILKFPGPTGRLQGSVPSYTTAPLSEFL GSHVYGMLGIPVHETVLGIRGGKVVCACRDFTDDDWELVEFHDLKNSLSDDEPGFTESAS TGSGVVLADVRAAINRIPELAGIDGVRERFWDMFVTDAFIRNIDRNNTNWGVLSDRKGHY RLAPVYDNGNSFNNKRTEAAIERRLSKDELIRQDALDVRSCYITDKGKPIAPLKYIASGQ DPQCTLAFGRFMERYEPDRLYSLIDSIPEQAMGVTVLPEGFKEYHKAVMAWRYENVFVPA WEDLRGSDVSGARPGDRDLGPAEPFGTGIPGISAETRPGPVR >gi|148337400|gb|DS264459.1| GENE 149 153310 - 153531 317 73 aa, chain - ## HITS:1 COG:no KEGG:BAD_1242 NR:ns ## KEGG: BAD_1242 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 6 71 323 391 394 63 52.0 4e-09 MTVESETGGDLSSSETTGEDKTDLVDLYEPEEWDGPDLFGAYSPEQEARITPPAAPAMEP SLPDVPTVKRAGR >gi|148337400|gb|DS264459.1| GENE 150 153669 - 154421 782 250 aa, chain - ## HITS:1 COG:BH0335 KEGG:ns NR:ns ## COG: BH0335 COG2801 # Protein_GI_number: 15612898 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 20 243 33 256 261 218 48.0 8e-57 MIEHPEAERVDPIAGDVHAIWRDSHERYGARKIKAALERRGVTASRRRIVNIMKRRGMTS AYARRTFKPHKTRVNEARLANILDREFDGYEPRTHLASDLTYVRVGGKWAYVCLLIDLAN RSIAGHSADTGRTADLVMAAFATLDFPLTEVEVFHTDRGSEFDNAKIDELLDVFDIRRSL SRKGNPYDNAVVESTNRLLKKELIYRNHYTSLEQLRSDLNDYVWWFNNQRLHSTLGYRSP KEFTEQGLVL >gi|148337400|gb|DS264459.1| GENE 151 154505 - 154792 414 95 aa, chain - ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 8 95 7 94 94 81 56.0 5e-16 MADPKHPRHYEESFKRQIVQLYENGKPAREIKDEYDISHSTLHRWVQGIRNSGSTKAADN RTPEQNELIELRKRNRQLEMEVDVLKQAALIFARK >gi|148337400|gb|DS264459.1| GENE 152 154808 - 154984 257 58 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488749|ref|ZP_02029598.1| ## NR: gi|154488749|ref|ZP_02029598.1| hypothetical protein BIFADO_02056 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02056 [Bifidobacterium adolescentis L2-32] # 1 58 1 58 58 96 100.0 5e-19 MNDRFGSTARDFAVDIVTREGGTPEDVRESFADPDLDRIASDLDWLQCIRQSDEGRMT >gi|148337400|gb|DS264459.1| GENE 153 154981 - 156021 1157 346 aa, chain - ## HITS:1 COG:no KEGG:BAD_1246 NR:ns ## KEGG: BAD_1246 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 341 23 362 367 422 69.0 1e-117 MEQRTIDDGELRQWIDEWGEESHDDILPSGDEADIANRILEHHTRGEYAGDVDWNGAWES LRGIVGPALEHVHGFFPDGAETLARYVREIDMGIDPDTGEDLERAAIEEPAFRTSFRIRA MADADPEDEPALDKVIQAADADYRHDVISGGDVARADWRNAAAYEWRRLMLEPHAPTDPV SDVSALAVIAVSMRYAPDATRAMIATDVLGPDMPTMGGLRDIIGTPEQDVPVDTLITDLV GQWPDATPDRDTLTDRDHAAWRILSPIQQNAPAPVEGHIYGLLGMLDHVEYLGRTGETGR IHAERALRFDPSDRFASAVLDTAPTADGSTGLAELADIAQDRGTIR >gi|148337400|gb|DS264459.1| GENE 154 156147 - 156692 95 181 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488751|ref|ZP_02029600.1| ## NR: gi|154488751|ref|ZP_02029600.1| hypothetical protein BIFADO_02058 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02058 [Bifidobacterium adolescentis L2-32] # 1 181 1 181 181 365 100.0 1e-99 MFHFFGRMRGNGRKAAPDYRLLDYADHLRFIRPFVQARYGSEPAQEILSILKDSADDEWT YSRSRKALQPLTGRGDAEFLARVELMASEAIGGVNSAIGAANECGTRMERRLQVFAPDGM KPCASCRMLDGLRTGLDEPFTLPGGIGACSGDAWLPIDPMVPECLSEESACTVVELFEMP E >gi|148337400|gb|DS264459.1| GENE 155 156590 - 156814 110 74 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488752|ref|ZP_02029601.1| ## NR: gi|154488752|ref|ZP_02029601.1| hypothetical protein BIFADO_02059 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02059 [Bifidobacterium adolescentis L2-32] # 34 74 1 41 41 69 100.0 7e-11 MFRRRMASDRPDGAGMPVGGERVHGRRTVRDARMTRDAADGSARNPRIMSLETAKGLADA LGVTLDDFWEGLDG >gi|148337400|gb|DS264459.1| GENE 156 156928 - 157422 588 164 aa, chain - ## HITS:1 COG:no KEGG:BAD_1247 NR:ns ## KEGG: BAD_1247 # Name: cheA # Def: two-component sensor histidine kinase involved in chemotaxis # Organism: B.adolescentis # Pathway: not_defined # 6 148 10 152 169 219 81.0 3e-56 MRNDGIHMPELSEPTLDELERLAEAIGERADGFELDMPDGSVARGYRAPGIHGTLPEGWR VYDIMECDSERWTPYPGYEDVAEADREDGENGRYETSLVIDDNPGPHFVDQGDPFVTRHD LSGVDWEFDEGHCGYDGVQLSDDIARLAAAAMPVMESARTEPIR >gi|148337400|gb|DS264459.1| GENE 157 157419 - 157826 313 135 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488754|ref|ZP_02029603.1| ## NR: gi|154488754|ref|ZP_02029603.1| hypothetical protein BIFADO_02061 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02061 [Bifidobacterium adolescentis L2-32] # 1 135 5 139 139 228 100.0 1e-58 MNQATRHMTPDAWLGVPLQLAIRDLAVVNGYAGALSVRTARRGTDAGRNRLLAVASVAVP SHGFTLLFRPLAAMEPNSFTALVTDRTGNIVWQEDADHPSYYEAYDLARRAFARLRRFER EDAEPSSRREGKENP >gi|148337400|gb|DS264459.1| GENE 158 157826 - 159223 1637 465 aa, chain - ## HITS:1 COG:no KEGG:BAD_1248 NR:ns ## KEGG: BAD_1248 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 465 34 498 499 895 93.0 0 MDEFFGTSTQVCGGFWPFSTDMALPVEGVPIGRSMTTGAGVCCDPISWFRAGIIEQPSMF VMGLPAIGKSTFVRRQVWGMSALGMNAIIPGDLKPDYAELVRLLGGQVIRLGSGLGSINP LDPGGIHEALKRLTGDAREDLLADYHERRSALMEVLLTISRTGREEGRRTVSDVESNVLS TALKILYERTKDDPEPPVIPDLRDLVRQGTPEIRAAAVFDDPENDEAYARSTRDLLSSLH GLANPMGRFGRLFCEQTTERLDLSRPVDFDISALAQAGDDVVAAVLAATWSSAFAAKNAA DMMAEAGLQPRRNHVIIMDEMHRALRASPLMVDRLDLLTRLNRQWGVGQIMITHTFADLL CLDTQAQNNKARGFVERSKIKVLGALSRTEIKRYLRGESGLPISVREEDMLADWATPTNF DANASFKGVGKFLIKLGGLPGIPVNVQMCDIERSGFNDTNAKWSR >gi|148337400|gb|DS264459.1| GENE 159 159378 - 160865 1758 495 aa, chain - ## HITS:1 COG:no KEGG:BAD_1249 NR:ns ## KEGG: BAD_1249 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 495 1 495 495 867 90.0 0 MASSTTYGDWMRPIAGGIRNIGKPLTFAGLGVLVVTLMLSMVNVVAAIATAVIGIGTIAV LAVRDREHRNVLDRTVERRSWLSESRKGRALYRSGMLAPVESGECRLPGILSRVSLVEAN DGFGDRLTLVRHGHTGEYSLLFACQPQGAALADDDVEDAYVASWAGLLEALGGEAGVTQL AVTVDTSPDSGVRFRRNLAKRTVKDAPELAARAMAQIMDLYATGGASSSVILTLTFRYVD VRDGKFLEPEDAARRIGQLVPNLIRRIADAGGGTARTLTIDEISRMVRVSYDPATQDTLE QADGQPWIEWEDAGPVACEAGWDHYRHDSGVSRTWEMCDPPKSNVTSSTLARLLGPLSDC DRKRVTVVFHVLPPDKTAFMAEQNRQRAANQVSQEKRASISAMSQINKANRQAIETNRGA AIVFFGMLVTATVRAGNDERMRLEQATHAVEGAAGSAKIDLRPCYGAQDTAFAASLPLGL NLRNYTPPSAFAALS >gi|148337400|gb|DS264459.1| GENE 160 160866 - 162890 2373 674 aa, chain - ## HITS:1 COG:no KEGG:BAD_1250 NR:ns ## KEGG: BAD_1250 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 674 1 707 707 834 69.0 0 MARRRKGRLAAMLLALAAVLSLAACGGPNFDALKDDLKFGDEEISDVMTTYSMKIPQNKP GKLIRSPQYAWANKNQGNAIAAAGSAKVYFIANPSAQCDALNATNSQISDDDASEGSGTW TYVSSTRSCDKQRKLSWLEKTMWTMYEQQSGDTIDWLSTSRNTLVASSGTVSTLQNSVLP MYDAWDTNVNKYLNIAQGVLIVAAAISLMVLAARIVWQIGNGSAGMDGHLLGKIGWIFLG VFMGSSAASIALTFFKQAHMTKTVVNGVPTATAGRSTPALASWTPGSGASFFVSDWVRLQ VDPFLIIAAVCGVIAAGFKLITTQEGRELVPLGKAFMWAMLTSVCLAGFVNLFQDTVDTW TAGVLKSASNMMRDSWQHNTLAATEFFNLDWPIALVLTIVVWFCNLISKVFCYLRAGLLP IMVGVAPVWAAMSWMETGRQAFGKVMGWLFAFLLYKPVAALVMATGSAIMVTATDGDDSQ AITLMLTVSVIVLLPAMIKLIVPAVAGSVGGGGVIPSMLGGIAGMGVMAAGGALKAGAKG VAGAAGKKNAAPDGAKPSGAAQPSGLGAGGGPAGTQAGSSGGGGQSTSSESAVPDGAKDT ADNPMPSGMDQQSAGSGSGGTPDGAKPESSSTAARIEQSVGRSGSDPSAPAGARPSGDGP DGANRAATRKTKEF >gi|148337400|gb|DS264459.1| GENE 161 162895 - 163212 418 105 aa, chain - ## HITS:1 COG:no KEGG:BL1486 NR:ns ## KEGG: BL1486 # Name: not_defined # Def: hypothetical protein # Organism: B.longum # Pathway: not_defined # 11 105 6 100 100 135 70.0 4e-31 MLEHIASAAAYGMVLADLANPKACLPPGFSSPVSTALGWVKALGLVVAIVALIRIGVHVL RQQGDGVPDRDDTFDKLINWVVGIFIVAGALAFMSALGLSIAESC >gi|148337400|gb|DS264459.1| GENE 162 163301 - 163819 374 172 aa, chain - ## HITS:1 COG:no KEGG:BLD_0372 NR:ns ## KEGG: BLD_0372 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 17 172 2 155 160 169 62.0 5e-41 MNVQNQPPLPRAPHPRPALTQLVPPFAARPTADRVWLVAAHGGAGCTTIRMSARDRYADA GRGLPVSADPRVPSRVVLCAMCTGRGLEALRALLADWNAGLFGQTILMGVAVTMPLPKTP RELRKGALLVGSAAPALWRLPFIRGLDLDGFPETYPRAYARMLADLEAGGKA >gi|148337400|gb|DS264459.1| GENE 163 163834 - 165081 759 415 aa, chain - ## HITS:1 COG:no KEGG:BDP_0966 NR:ns ## KEGG: BDP_0966 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 158 322 45 211 321 115 51.0 5e-24 MDEIDEWTVGPIPIRPAPGPAAPRPSPDDVGARPVPSPEPRIPDSSENRPAASDKPPVQG PRLKGLSHARTPEIPDMPPLPSRAPSRDSMPSVALAPAPIRPEPSSFVAASPESVRDGLA AVADIPPETHGIPRAAVIVCCSVVGAMLVSAIAGGCVVAAGRVREAKAAEQSRDRCESSL GRLSSARRELDKAMEEAERTSKTDPKTVKDPKTIDRLNRAASVKTPGMVSCDASDVDGLD TAAVKADRSAKTAKTSVKAIRTAVKAVEASKLDKTVDDASRLLKDSEGKVQDARTRETLS KAIKARDAVAIVKAVKAVNDSKAAKEKADAEAKAKAEQEAAKRKAEEESAAEPQQSQNVQ RQTAGTGQGRAQRQESVQTPSTTQRQQQSSTPSAPSWSVPSENDDGGMPDTDPGL >gi|148337400|gb|DS264459.1| GENE 164 165103 - 165753 675 216 aa, chain - ## HITS:1 COG:no KEGG:BLD_0374 NR:ns ## KEGG: BLD_0374 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 6 216 4 205 212 79 31.0 1e-13 MAQTTRQQIQTMFDLIETLKERKYLPGESKISDDRITDALRTMVEPNGLMDATIAKVLRP DMSGEEFEAVAMLDEEASYGLFDTYRAIMMPSDYDVSHAIACAFKQDIPRLFSDFALQIH PTSDRAGAYRIAATVSYMEGDPAARCKHFADQLYRVKPEDEMLRNLSVALIHGIEPPRTA GADGIAAERERVQAQREQTDAGEGLAAEAMNRVAAR >gi|148337400|gb|DS264459.1| GENE 165 165954 - 169085 4789 1043 aa, chain - ## HITS:1 COG:no KEGG:Blon_1259 NR:ns ## KEGG: Blon_1259 # Name: not_defined # Def: allergen V5/TPX-1 family protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 51 980 36 935 973 112 31.0 7e-23 MNKKAFATAVASVAVAGTIAAPAMADETAVTPVEQAQQAVAQAQEAVDQAAAQQNAQQQD QVSAAQQQVADAKDSLDQANTGVQDAQQGVDQAQQQVDQAQQNVQQAQQNVENTINQNQN VQQATNGVQQAQDSLDQAHDNLQQAQAKANQTAQNADRLEKAMNDSQSIRDDAAKAKAKA DKEAQEAQAKVDATDKTKLDQDTAYKKAAADKAQAKADQAQQAADKAQSKADEAKAKLDE ATRLAGDANDPAKVKEAQDAARKAGETVDAARKSQAEATVAAATAKTAADKAQSKADKAQ KKLDQANDDAASAKAQADKTQAAFDKASNDKTTSDKALDKAQTANEKAQGELAKANQNAA DAQAAADKASQDADAAQSAYDAAVKAAADAKKAADEAVKKEAQGAAGWFQTDDAEQAYKY LTDSSVSKYLEYTHIGAKDDATSLDNLLRALDMIDECNRLREENGLEPLKVSETALAMAM VQANYAANGHYGHNYQYENTGENLAWGPSDWDPYDGWYTAEKANYDAAVKSGDYPDLAAL SAYDISLKYPDLYQKIGHYLNIISPDYTATGMAYSGYGANKYSHGFSQEYFNEWNSYNKN DTVYDAAVYRTMVENYVNQVRSAQSTYDEALKKVDEAKKALDKANQAKADTTAAQAAAEQ AQQAAKAEAAETAKVLIAATAKSQQTQVAYEQAKSANDKAQADYTAADTARQSAQADYDE AKSANDKAQADLKAAETAVGQAQTALDKAQADKTQADERVSILTDAENALAQAKTTYEQA KSEADQARQALEAAKADLDAKQDAYAQAKAKSDEAARQVKDLEAALADLDAKTQALTAAQ KDLDAKTQAYEQASTARDDAAKQVEAAKTAVKDAEQALSDAQAKLEQAKRDAKDTDAVKA AQAAVDKTQADLDAAKQALTAAQAKLKAAKAAQAQAKTAYDKAQAALAAAIKAAADKNGS KTDNNNTGNGSATVSGAQTGQTGLKASETAAQAAAAKADKVMASTGANTNGMLLAAVALT GIGWTMLDMKRRRMDVTARHSTR >gi|148337400|gb|DS264459.1| GENE 166 169268 - 170227 929 319 aa, chain - ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 87 265 30 200 251 146 43.0 5e-35 MDWDWVIKGDHVYDTRRERRSRLLQKRHMARVFRMLAAVTTVFCLVGVGTFAWIGVEQAG ASRRAAQSAALADEGDRSAGKYARMVEKAHAYNRKLAATPQVIGETSTEDGVIDGDFGFK DDKEYQNLLDFGDGIMASVEIPSIGVDLPVRHGADSYALDNGLGHLHGTSLPVGGESTHS VITGHTGVADKALFTRLTELRKGDVFYVKVAAQTLAYKVTRIRKVDPDDLRSVRIQPGRD LVTLVTCTPIFLNTYRLLVTGERVSMPDDAPYPEDAPRTSGRDTRPYLVSGVTLLAGLPA AIVAARPRTRPFGRHGRRG >gi|148337400|gb|DS264459.1| GENE 167 170365 - 174807 4518 1480 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_0963 NR:ns ## KEGG: BLLJ_0963 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 12 1437 14 1394 1700 407 30.0 1e-111 MGFLTRLLAGLTAAAALGAGLTGTANAVDVTGATGNTKSVVKLAADDTSNLPDHLVNGNF EYPVKSDMPVNDGNFWYISQNDGSYFANGTVLGKRYKLPEGFDKAKFAWHSTQTGDTYYP DLERADDVQVDYTADGTNHYSEISAAQSGTAIYQDIRTVPGTLYKVRLKHASLNSTYLDK MQVMIGTPGHEQPVEMTRTSVNGHGDKLNEKSTTIATKVTNGNNRHHANQWETYEGTYLI PDGQTTTRFTFKSIDAKQLDYGNVLDDIVFDKAYRLSYDKNASDASGQVPSNERGRENTV QPAKAKTTGTVKTVADENVRYGSLANGDFSYPSFSDIQKNEQEGYADLRTFLKSDDGTLW YNMSATDLSKYGKIGQIPGFDSSRFAWSSTENGSRVELQQDRNTKNTYAEIVAQQDNTSI YQNVSTGNGGVLYKIRLKHASRQSSHADRMQVLVGSDTDHATPVEMTRVTSNGHGDKVGG KSTTITTKVSNTDPRDHGAQWETYEGYYQVPEGQKNTVFMFKSLEGFKEYETLPGNNIGN LVDDIEFSRSYKLTYDANSSDASGQVPSDTAANTVKQAKSKTNGSVRLAADDDVAEYAAN GLPKQIMNGDFDHDWRNLVSQSRMSEKYNFANVDPAHGDVEISGGLNSKGEASKQWVHLN GFDAAKFGWKSNQTDTRVDGRGGIVEIQRSKANDNMYAEITASQADTYLYQDIDTAHDSP TVYTVKLRYAHRNGTVDSNEKIQILVGAPGHEQPVEMTRIASDRGNKVGEKSTTVNAPNT DGWLGSWDTFQGSVEIPAGQPVSRFTFKALGSIDGVTGNLIDDVQFKLAYPLSYDKNAQD ATGSVPSSQYGKENTVQPAKAKTTGSVRLAADKTASGLTVHDLEMNDVPADYRQFILNTT DTRLSQVEFEDGAWYKSTDPSSQGMWPLRIGASLTIPSVGDWTDPFGKTHQISMTMRLKD WNGGSVSELYRFDGHGNIVGDGRFWINTAYGSGYSSLPAKVKAAMGGVDTSKRAGCSWTV EFTYADTGEKVPDTFKGVTGFNDLDGWDAQSDLKFEGVQLLSGFDGAYKRSDAELGTYGT NGFAGIGHDAGDEAHLNAPQQSRHRLAATWTGSTFTFSYDLSNPAGRTDGSRMTFGAPVT RTAVLTYDKNAADASGQVPSNTTPDTTQTASSKSTGKVSDLVQRTTTHEDGSVTVKTIDT STDVVSGCQVYYPAGQRITLATLAKDDDCWDSSMLTRPGHTQLGWNQDRNATAAQPEVTM VEGGMTVYAVWVGNSVLTYDTNKPNTWNGQMPSTPASVSVSYNTAAADGSGWQSGDTSKI KGYRFLGWYAGPQDDAGLYDWNTLLTGNVTVYAHWERLKASVVYDRNAKDAKGSHANTTG WQYSDVTVPSDTSKSFKRDGYVFLGWDTQADGNGTAYKDGSQVPLQDKDITLYAQWQPVF EQFTPTGGVSLPLLVAGGVTLLVMGIGSTVMLTRRMRGEQ >gi|148337400|gb|DS264459.1| GENE 168 174909 - 176498 2310 529 aa, chain - ## HITS:1 COG:no KEGG:BLLJ_0962 NR:ns ## KEGG: BLLJ_0962 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 7 490 3 528 569 166 31.0 3e-39 MDKRKISAACATAAALAALCVPGSAAFAADGTLTLNAGDGSTLAGHSFTVYKVAGYNDVV KDGANVKSVSASSPDATTDAWVKAALNKNGVTYNTSEGRNAAEQLLRLKTNSDTLRKVAG TLQSTAASSKVAAVKTNQTSATGSLNLTLPEGYYLVVDAQGIPILVSTTIGGSVRMSNGQ TLGSTQIKTNVTKIDKKIKSVDGTWKDSAAATNGETRDFKATFTVPNKLAVDTITLEDHM TGIVYVDGSFHAATSSGMDVTNQFGTIGKDKVGNSAGTGFKTTSLQSFVDTYQGKQVTVT YQGRVVNASKANQGLNQILITSNWLPNVVPPDVPTPGPGTDETPVPTYDVNLKKISAADG NKVIQGAKFKLHNDSLNQWYVWNTSSNQWTFTTDESKATEFSTNASGVINFTRLGAGDYT VKETQVPTGYFSFVKPSFGIHITDDGHVTITGKDQPGLTGTVNNADGKTTTPTAVVKNID NITQLPQTGATTMGVMLVGAFAIILVATASGFAAYRVRHENLGDGPAIA >gi|148337400|gb|DS264459.1| GENE 169 176720 - 180667 5402 1315 aa, chain - ## HITS:1 COG:no KEGG:BDP_0965 NR:ns ## KEGG: BDP_0965 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 57 1315 30 1272 1272 1843 79.0 0 MGSTNKNKKWGKAALAAMVAAATLCTPVAGAFAADGGGGSGTGTGTGDGAAGGEGQISWV YKDSFGAPTRENVKAAMQAAGVKSMDGAESNGAIDEAVTNANNECVARAKASGNQNPECR LVSVGFVHTPGKSGDWYTGANGGFNAKKWADAYKAAGISGTTYYYQGVGYKTTDNFSDGQ TNIDSLAAREMAKAPRSVVAIVLDQDEPPVDTPPVPPTKHITEGVSADSMTNTTTIESKT GRKGTKLDFKDTFDPHGQKYTVSNLKVTDKTANKDMTGSYTFNTANGATPSGNVLTATWN GGNLPDDHDFEFTFDVTVSTPETSKVEDKGHVFWQGVTKKQDQDTDSHEFPTWKPNPNKS WVKWDGKGWKLVTDPTKSNKTGADDNYFLDGDKVASAVNATVEKDLVPDQLKTFSIEDDY ANADYLFDADGKSSIRVYEADADTAAQSSVDGIDAKGKDVTALYDITVEGTKVTAAAKAS HLKELTGMTKAKQVTLLVPGVINMANGKGAAQVRKDMGVGEGDETSFCTAGKDGHELTNS GAEVVNNQSVSTNEPKICGYVPPVKKDVVSEASQGGDQDSVQGKVVFPGQKVEYQLTTQP KLPGNLAYDVTDVAVTDTFDAYLEPDKQTLEVRDLLTGKTISKKRYKTTWDDTDHAFRLS FDNEYVKANWGKGKNPSVLVRFEGTVSKDAPTDHKVGNQWGLTLNNSLTPSNKVYNEPPK LTPKKKDVSSKDRTVSIDGKTLLLGDTGNYILTLDAKDLSKDSTAYKVQRLGLVDDYDEE YLDIDQTKIEVLDSTGKDVTAKFNIQLKNGVAYVFAKTVDTEIPATGETVKGDPQPADLE EYSTRKLDATKDPSIDQDLLGQEYQVVLPYKVAKVQDGKVVKNKAIQITNDLSRETNEVS NPLKPINPAKDVTVKVGGESIDGKSVYLNRTFLYQLDSSIIPANRAYPQVDQWKIVDPLN TEYDQYTGQWAVYATRDLYAGGQVVAAKGDRIAGNGFDSSKFGGDLFTATADGNGQVTVE ATDLYRQLVSTDIDHEAGWRAYIQCKRVKVGERIENQFTEIFNDKNLPSNIVWTRTPDMT PSIHIEKYDVASGEQAGDRDDVKDALKMAGDSQQIAFKITNTSKTDPTTGEGAWYLAKDL RMVDKTIAGEGEVVDLKYPDNWDTLVLKPGESTIITGTLKGVQAGGKHTNRVKVTGTPLV ECPVTDQLGDQQPADGDQTGDSQSDGDGQSDTGTGTKTDGDADDTTGLKQVKVGDTTLCE DTTVESNTDDWNGYRESLAKTGATIAGILLAIVAFGAIGVALMGARRRTGAHSGR >gi|148337400|gb|DS264459.1| GENE 170 180717 - 180986 135 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRAGDGTAWDASHVPVLPRGRTGARPSFKTTMVRTGKRCTMSTSFPRDEMSKRQESPVRV DGAMRKETEETNHPIGQKPPEAQEEFVVC >gi|148337400|gb|DS264459.1| GENE 171 180932 - 181954 962 340 aa, chain - ## HITS:1 COG:no KEGG:BDP_0966 NR:ns ## KEGG: BDP_0966 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 30 229 12 211 321 167 64.0 6e-40 MADMKENNMNDGVPSLDEAAAEAVRLSVGPRPGAGPEKPRKDRRRIIIGAAAVAVAVLVA GGVCAHRAYESHQASVARDACESAVADQAKAVKAYKTLLGSDATVAALKTDAKSVKDAKT VDTLKRAAAVRLPAMVKCDASKAADLDAAAAKANKAARTVKSDTKALETAVKAVETSKLD KTVADANALYKATDGKVADDKTRQDLDKAVKARDAEAIAKAVKAVNDSKTAKEKADAEAR AKAEQEAAAQAAAAQQAQQSQQRSYPSSGSGSNRSYSSGGWSAGSGGSGSTGGQSYSGSS SSGSSTPSNGSDDYDITQDPFFNQHTTNSSCASGGFCPIG >gi|148337400|gb|DS264459.1| GENE 172 182130 - 182351 135 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488770|ref|ZP_02029619.1| ## NR: gi|154488770|ref|ZP_02029619.1| hypothetical protein BIFADO_02077 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02077 [Bifidobacterium adolescentis L2-32] # 1 73 1 73 73 118 100.0 2e-25 MNISKPISTASRLRATFTSSAAPERAGKPIHATLSLDPGLHRRLKLAAATRGVTMSELVS SWIESNCPALDGR >gi|148337400|gb|DS264459.1| GENE 173 182348 - 182563 211 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488771|ref|ZP_02029620.1| ## NR: gi|154488771|ref|ZP_02029620.1| hypothetical protein BIFADO_02078 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02078 [Bifidobacterium adolescentis L2-32] # 1 71 1 71 71 128 100.0 1e-28 MDIMPDKKQLRAGSTALRKHKPVPVMSSRPGVSVDYSCASCGTRFADLETAREHTVLRIV EAVSNTEGKTR >gi|148337400|gb|DS264459.1| GENE 174 182578 - 183195 607 205 aa, chain - ## HITS:1 COG:slr0110 KEGG:ns NR:ns ## COG: slr0110 COG1192 # Protein_GI_number: 16331850 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Synechocystis # 7 182 2 181 211 68 30.0 7e-12 MENNETNVPRIIAMANMKGGVGKTTSTICTAIALNKLGRKVEVRDIDPQGSATLWAAKAR AAGGPLPFDVRVANRFTVAMPPTDPETWVLIDTPPSQSDLIAAAVDASSLVVLVTTPGPL DLDRMWETAKAIDRPSSVLLTQTRANTVALRDAERFLSDHGLARFDATIPFKEALRRSSE SGRMPSASGYGLVANELIEAFNGIE >gi|148337400|gb|DS264459.1| GENE 175 183250 - 183705 322 151 aa, chain - ## HITS:1 COG:no KEGG:BLD_0387 NR:ns ## KEGG: BLD_0387 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 8 141 3 130 158 79 36.0 4e-14 MSGDPNRVAGVCSGLPLGIQDLMWGTDNERVRNKSDRRILKSTARILCDMCPIQAECLAQ SIIGREQHSRIGGIDVKARRLLRHRAEADGVDLDPSNPARTRNLTSWIRDHPELVREVRE QSSTREGRRRRSEDQYAYRQRKTVESAQRPE >gi|148337400|gb|DS264459.1| GENE 176 183702 - 184967 749 421 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1196 NR:ns ## KEGG: BLIF_1196 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 328 1 322 376 355 60.0 2e-96 MSNIALSWAFKCHVGNASAKAVLVYLADRADDDGSAAYPKIETIVNVTELSERTVRSSLK LLQERGFIRRGDQRYARLGKGGRNRLPQYCQVVWDLAVETDPSNLTWIRETHAAEHDPAT MGADVDPEAGTVVENGDSKDVLPENVGTEPISSSANLAGLENEPEPALQMPQGQLCKSRT SGSANLAPPALQISQGCIYKDKTLQVNPPCKPLPSLPSGELPAGGKRPAGKDGRNETTGR DSEAVAVMGHLASVRSKLALTTAKPAKRDYSRIANLVDRIAEAHAGDHAAVLALILAVID WLPANPYWLRRVDSARRLVDNWDRIANDWTVGRIERQRERDTAARDRDRRPLSKPTPTPD RHSERHVHSLMCEHVLADMRPHESEYDHEGSLRHGRPSEWQAACMRHADELNKRDGIEVA A >gi|148337400|gb|DS264459.1| GENE 177 184964 - 185110 177 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MEAMCIVFVFAALVCLGLLSPFLYAAAAVLPMAANLLRRLIRLIGGSR >gi|148337400|gb|DS264459.1| GENE 178 185110 - 185250 119 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488776|ref|ZP_02029625.1| ## NR: gi|154488776|ref|ZP_02029625.1| hypothetical protein BIFADO_02083 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02083 [Bifidobacterium adolescentis L2-32] # 1 46 1 46 46 71 100.0 2e-11 MVVLIVAVILALVFLTWTLCRAAAVGDAISERLSKSRSPKEEGSGL >gi|148337400|gb|DS264459.1| GENE 179 185256 - 185612 304 118 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488777|ref|ZP_02029626.1| ## NR: gi|154488777|ref|ZP_02029626.1| hypothetical protein BIFADO_02084 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02084 [Bifidobacterium adolescentis L2-32] # 1 118 1 118 118 210 100.0 4e-53 MTDHDFNGNESVIPSDIEYTLSRIGTIADSVDSSMTVGEIVRRAYLCGVGDTLDEFRKLV DRRTFVDSAIDGAIAIDEIGAMVYRDGRIASMLTHPALDRPAVRRDLEFPSVAEAESR >gi|148337400|gb|DS264459.1| GENE 180 185631 - 185840 239 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488778|ref|ZP_02029627.1| ## NR: gi|154488778|ref|ZP_02029627.1| hypothetical protein BIFADO_02085 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02085 [Bifidobacterium adolescentis L2-32] # 1 69 44 112 112 92 100.0 1e-17 MLQHDAYSRRAGRCLVTAAILLCAALSCMVAMAAAPAIAMVLMGLALAGRGWWCRRNAKD AWDLSVWSM >gi|148337400|gb|DS264459.1| GENE 181 186271 - 186630 261 119 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1199 NR:ns ## KEGG: BLIF_1199 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 117 1 117 122 143 64.0 2e-33 MAGGIYEQSEWPDSRSDYVQVCDGCHTAIWSTRWNEETSDGFDAFLAMNGWHEYIDQLDS RTLNLCPECAVRALRRGEVRTLADWRIRPVRSYTHADQEVYAQLSARERMAANLLLTAA >gi|148337400|gb|DS264459.1| GENE 182 186630 - 186851 175 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|291457743|ref|ZP_06597133.1| ## NR: gi|291457743|ref|ZP_06597133.1| toxin-antitoxin system, antitoxin component, Xre family [Bifidobacterium breve DSM 20213] toxin-antitoxin system, antitoxin component, Xre family [Bifidobacterium breve DSM 20213] # 1 73 16 88 88 128 94.0 2e-28 MNGVTQRISALVKSEGLTCAQLGSLLGLSKTSANGKLLGRIGWTTSDIVVLSEHFRVSTD YLLGLDADHEEVA >gi|148337400|gb|DS264459.1| GENE 183 186974 - 188047 856 357 aa, chain + ## HITS:1 COG:Cgl0034 KEGG:ns NR:ns ## COG: Cgl0034 COG0652 # Protein_GI_number: 19551284 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 176 355 14 188 190 164 54.0 2e-40 MSTSEVSPETPLDKGQRAEAAIPTNVRVYLGLSGKTQKALGEALGITKSAMSMKMCGKVG WSVSDLVTTADFLGVTPSALMDDTILSKAEAGYAKSAEYGVFAEKPGALVGAGSPRFLVS PFNPDAPVEGGISGAAKGALAGFVPFGVPSGSGSPSSPSKHDGIGVSGRSQAHETLGAMT TIIMRTSEGDIKINLFDDETPETVANFLGLATGEKEWIDPMTGQPSHEPFYNGLTFHRII KDFMIQGGCPLGNGTGGPGYDFDDEIVPDLKFDHPYLLAMANAGLRRGMDGKIHGTNGSQ FFITTVPTPWLDGHHTIFGEVADDDSKAVVDKLEAVNTDRMDRPTEPVGIVSVEVLK >gi|148337400|gb|DS264459.1| GENE 184 188160 - 190481 2696 773 aa, chain - ## HITS:1 COG:MT2660 KEGG:ns NR:ns ## COG: MT2660 COG0317 # Protein_GI_number: 15842122 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis CDC1551 # 19 762 62 792 793 811 55.0 0 MSDMDHEVRSARMLGCEISTNPLDPLEPILKMCEYHHPDEDMSILARAYRRAVNQHSSQR RKSGEPYIIHPLAVAQILADLGMGPLVVAAGLLHDTVEDTDYTLDECRAEFGDTVTGLVD GVTKLSKMEYGDSAQAETIRKMVVAMSRDVRVLVVKLADRVHNARTWRYVKQSNAQKKAR ETLDVYAPLANRLGMNAIKTELEELSFKVLYPKIYNEIVVLVARRAGQRDVYLKQILAEI NEDLDEQHIKAYVTGRPKDYFSIYQKMIVRGHDFANIYDLVGVRIIVDTIQDCYAALGAV HARWNPVPGRFKDYIAMPKLNMYQSLHTTVVGPGGKPVEIQIRTWDMHRRAEFGIAAHWK YKENGQAGRALSSPDKSDRKRGENQELSEADNLKWIQQLADWTSETPDSDEFLGSLKEDL GAAEVYVFTPKGKIVSLPAEATPIDFAYAVHTEVGHRTMGARVNGRLVPLDTKLENGDTV EILTSKSESAGPSRDWLSFAKSPKARNKIRQWFSKERRTEAVEEGRDELTRAMRKRNLPI TTLLTPEALVGVADELNLANAEAVFVAIGDGQISTQNVISHLVRDAGSDEVDEEVEQEAL PLKQVERTKKTTSSLGISVKGVGDIWVKLARCCMPVPGDKIIGFITRNQGVSVHRVDCQN MLELEKRQPERVVDVQWTSTKGVFMVKIQVEALDRPHLLSDVTRVLSDHGVNIISGSIST GTDRVATSQFSFEMADPQHLNTLLAAVRKIEGVFDVYRITGAKDSAEPRLRKM >gi|148337400|gb|DS264459.1| GENE 185 190601 - 191077 571 158 aa, chain - ## HITS:1 COG:Cgl1859 KEGG:ns NR:ns ## COG: Cgl1859 COG0756 # Protein_GI_number: 19553109 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Corynebacterium glutamicum # 31 155 22 146 149 140 57.0 1e-33 MAFDEAYNEPENVEVLVKSLDPGQPAQLHYAHAGDAGADLRTTEEVTLKPFQRALVPTGV AIALPAGYVALVHPRSGLAVKQGVTVLNAPGTIDAGYRGEIKVPLINLDPERAVTFHPGD RIAQLVIQRYVEAKFIEAQTLPESDRAERGFGSTGVAS >gi|148337400|gb|DS264459.1| GENE 186 191077 - 191370 502 97 aa, chain - ## HITS:1 COG:no KEGG:BAD_1004 NR:ns ## KEGG: BAD_1004 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 97 7 103 103 154 100.0 1e-36 MAQDYDSPRNKDEDEESLQALSKGSQNNSNDMDDDENAIAEDYELPGADLSNEDASVTVI PMQGDEFICSECFLVKHRSQLAYTTDDGQPVCKECAA >gi|148337400|gb|DS264459.1| GENE 187 191519 - 192514 633 331 aa, chain + ## HITS:1 COG:no KEGG:BAD_1005 NR:ns ## KEGG: BAD_1005 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 331 1 331 331 532 99.0 1e-150 MPENALEDARFDHVSETGELVFVSGAGKFAVKVDEALERAILEAKQIRTETQEERQQQAP STLPISQIQSLIRAGANPTRVAERYSLSEALVRRFSAAVETEKQYAIEQFLAVPAPKESR VRTLSELIERTFAAAHVRLEDVRWKATRRGLEPWKITAEFDSAGHAARAEWSWNMHDNAV NCLNATARKLIGEQDTPTEGHAEKQVDQNFLASLNLPGDSARSARIEQTVSAWNAPEPVA PQATNIKTTVETQSSATVPLPNRPEIATTQYPAPSTTEPAQNSQNTQSAGEQQSDKSKMA SSDPHSQSTTKSKRRAGRSAVPSWDEILFGD >gi|148337400|gb|DS264459.1| GENE 188 192570 - 193796 791 408 aa, chain - ## HITS:1 COG:Ta1349 KEGG:ns NR:ns ## COG: Ta1349 COG1524 # Protein_GI_number: 16082335 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermoplasma acidophilum # 75 402 63 411 421 67 24.0 4e-11 MSVEVPEIDQLLAMTSPARYGDELPDEGSRGGALHLSSVLPAISSAIGHPIPTAIHADPK RLQEALGLPDARSAVVVLVDGLGYWNINMRLGHSPYLRSLMADSVNQRPIATCMPSTTVA AMSTFGTGTCPGLTGMTGYTQLNPDNGEICQLISFKNAPAPLKLQQQPTIFERLAEQDVR VTSSGLPKFAFSALTQAALRGSDYISNDDPHRRIMTAAKAANTPGLTYVYLRDADKIGHN YGWDSDKWIGTYERIDAQLSLLRRSVPKNTLIVIVADHGMITADPEACIDIVSEPQLMWG VANVGGEPRCVMLYGEDGENPEDIAARWRDVLGERAQVRTRRQAIEEGVYGPVDERVKSM IGDVVVSAAGSTTIVDSRTQAEKAMHLPSVHGSLTYMESDIPCLIDVA >gi|148337400|gb|DS264459.1| GENE 189 193882 - 196557 2330 891 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 21 765 7 692 830 499 39.0 1e-141 MVSHRKPAKPAFDPRTVKENIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRR IIYQMGQMSLNPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLPLVDGHG NFGSLDDGPAASRYTEARMAPAALGMNADIAENTVDFTPNYDNKLQEPTVLPAAIPNLLV NGGSGIAVGMATNMATHNLGEVVAAAKHLMRHPDATLEELMRYVPGPDWPGGGVIVGRKG IREAYETGRGALTTRSVTHIENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLDGI SGAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFKHTPLQDNFTINNVALVNGRPHTMGLK EMLQVWVDHRRVVIRRRSEFRRKKALERLHLVEGLLLAMVDIDEVIQVIRSSDDAEAAKT KLIAVFDLDEIQAQYILDLRLRRLTKMSRIELEAERDDLKRRIEELERILASDEALDGVV IDEMDDAVAKYGTPRRTVLLDEDEEGNLTPVVAHGDDGVSANAMAAARAAATVSSAAADV AAAAKAAKKAGDENATASALQIDDEPCAVMLSATGLIARTSEDAVERWENRSASDGRAKD DQIVSMFRTSTRSSYGLVTSAGRLVLAHVVELPKVSADGPLSVTGGVKAEELLGMTENTD PIRGERVIAAIDMPSTDDGGQLVPLALGTRNGVVKRWNRESPTTMDSWSVIDLKDDDEVL AAAEARDEDRLVFVSTDSSLLTFEAKNVRPQGRTAGGMAGIRLAEGCSVAAFAVVPDGKV TWNYEEGENGLFSASGAVVLTVAGDSEALPGTENGAAKVTPLEMYPTKGRGTGGVRSQRF LKGQDTLILAFVGAYPLHASTQSGAPVELPKPDMRRDGSGTDLSAPIAVVG >gi|148337400|gb|DS264459.1| GENE 190 196681 - 201525 2861 1614 aa, chain - ## HITS:1 COG:lhr KEGG:ns NR:ns ## COG: lhr COG1201 # Protein_GI_number: 16129611 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Escherichia coli K12 # 6 1610 13 1535 1538 1146 42.0 0 MYECMDLFSEATNAWFKHAFNAPTEAQRLAWPAIRSGENVLVVAPTGSGKTLCAFLSAID RLMTKEGDDLLRTSGGGDGTAESDCNAKKRKPVRGVKVLYISPLKALGVDVAKNLQAPLA GIAGQCEAMGLPSPKVSVGIRSGDTTPQERRRIVSHPPDILVTTPESLFLLLTSKARRIL SAVDTVIVDEVHAIAGSKRGAHLALSLERLESLAGRSVQRIGLSATVEPPAEAARFLGGT RPVRVIRPESHPDMDLKVVEPLSAMRDPVSDDAGRRAGAVKLPNRHTTHISGVSPAMEAL AERKGLTSGGGDEHTSRVSTGGSVWPAIERSVLDEVLKHHTTLVFVNSRGLAEKLTARLN DLYAQLRTSRKTGSETAVKADAGWDALSDRRLGRTALSVSDNASQPESTASDSTQPYPDL GSPEGREGFAKHYDSVVGSTTMLVSSHADADAIAMAHHGSVSKDRRKQIEEQLKRGQLRC VVATSSLELGIDMGSVDLVIQIAPPLSVSSGLQRVGRADHKVGGVSHALFYPITREQIIG TAASIECMRSGDIETLTIPCNPLDVLAQQTVAAAAMDDLKPDDWYVTVRKAAPFEDLDRT MFDAVMGMMTGAYNGEDFSAFRPPLQYNEEAGLISARPGAQRLAVTSGGTIPDRGTYTVV LPEEGSGPGPRKVGELDEEMVYESRVGDVITLGTSTWQIQEITRDRVVVVPAPGRTARLP FWHGEGDGRDAAFGRSQGRFIRDMAQGLRAEVSDGIAGDKTSRFDTTTIARLRRDGLDDN AIGNLADLLAEQRAATGTIPNDRELVVERCQDEEGDWRVIVHSPYGRRVHEPWAMAITTR IKQRYGFDGQVYAADDGIIIRLPDGDGNLPIRELLLFDTEELQRIIGTQVGESVLYAARF RECAARSLFLPRANPGRRVPLWQQRLRAAQLLNAARTRKNFPLLLETARECLQDVYDLPA LKHVMSGLRSGVISLSETVTETPSPFAENMLFGYVGAVMYQYDVPQAERSTQLLSMDPEV LERLLGATDMASLLDADVIAQVGKELAGRTFWNDLDETDIAGRVARYVKTHGPFTADQMI AELGLDAVQGVRMLDELHAKGELLKGHFVDDAAGADANGSDDSASERSPRQTPQQWLHKD VFRRIRALSLAKARKAIKPVEPAVYQAFLLDRQGVGPVGGARYEGVDGLMRVIEQLEGIY LNASVWESSVFPARVRDYQPSMLDELLASGDVVWVGSKINGSNAKEAGGIAFHPADSRLL TKPGEQSQNNAYSAGTMTVPETILAALSNGGAFHARQLSTAAKAIWQEHAEVNVNPETGE IILPSWGESQFEEALWSLVWQGKVTNSSFVPVRALAQGTVSVRAPRTAARRRVRIHASTP ATLGGLWSAVDSSRTSPMAIPDQADDTAGKPTAGIEEYDIALIESLLDRYGVIAAPLIDK EQVAGGFSGLYPVLKRMEEHGNLVRGMFVKGFGAVQFAGRDTVDALRGDDEARSQSCVAL DVTDPANLTGSAITWPEQHHMKPARRAESVIVLDHGMPVLFAVPKSHRIVSFTDDERILQ PACTELAYALQHQSKGSVSFAEMNGESLKERNEYRRLLHAAGFVDSPQGMKLYG >gi|148337400|gb|DS264459.1| GENE 191 201652 - 202839 1326 395 aa, chain - ## HITS:1 COG:Z1072 KEGG:ns NR:ns ## COG: Z1072 COG0477 # Protein_GI_number: 15800597 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 EDL933 # 9 379 17 379 402 60 24.0 6e-09 MANLLLAVIYVAFISLGLPDAVLGAAWPTMGTDLNAPVSWEGGISMTISAGTIVSALLSD RMTLRFGAGKVTVVSVALTAFALFGFSIAPNYWMLLLFAIPYGLGAGGVDAALNNYVAIH YESRHMSWLHAMWGLGTLLGPYIMAYALGAGQGWSWGYRYISILQIALTAVLVFSLPLWK TRTAQDTEETTEGDGPRKPLGIRGVLAIRGAREILVMFFCYCALESTAMLWASSYMVLGK GIDKTTAAMWGSLFCIGITVGRLASGFLTMRLSDPSMIRLGQALVLTGVIIMLLPLPHHI GTIAGLMVIGLGCAPIYPCVIHSTPTYFGKDKSQAIVGMQMACAYVGSMCMPPLFGLIAQ HVSVNLFPSYLVVFLALMVAMHETLRRKCGDRAAA >gi|148337400|gb|DS264459.1| GENE 192 203082 - 205406 2744 774 aa, chain - ## HITS:1 COG:Rv0005 KEGG:ns NR:ns ## COG: Rv0005 COG0187 # Protein_GI_number: 15607147 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis H37Rv # 2 766 47 708 714 488 40.0 1e-137 MAKDNYGAESLTVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNAVDEALAGACNHII VTLHDDGSVEVADNGRGIPVDVEPKTKLTGVEVVLTKLHAGAKFGNSSYGASGGLHGVGS SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYSDVDPEHPSPDSPFKKTRKNRPTELEI IGKVSPKTTGTRIRYWADPEIFNDTAEFSYDQLIDRVRQTSFLVPGLKITVIDENIPETG DESIDEMLEVDDNVIEQVTEENTSAETDDIGTSADILQEDSAEADESAESQENDAATQSQ ETVSQPVQPKYPHARVEEFCHTGGVKDFVDFLSKGEAVSDIWRIAGEDTYVEETQAVGDD GELHAQKVTRDCAVDIAMRWTNGYDTTMRSFVNVVETPGGGMHVDGFLQGITKQVRKAIE DNARKLKVNLKDSHMKVERDDILAGLVAVVTVRIAEPQFQGQTKDVLGTAQVKPIVSRMT DKQFGEMITGSKRGYKEQSGRVLEKIVGEMHARVQARKTKEVTRRKNALESASMPPKLSD CQPGNDDVAELFIVEGDSALGTAKAARNSGFQALLPIRGKILNVQKASLAQMLSNKECAA IIQVVGAGSGASFDIEQARYNKIIMMTDADVDGAHIRILLLTLFYRYMRPLIEYGHVYAA VPPLHRIALTGTHKGEYIYTYSDDELAGKLAELDKKHIGYNEDIQRYKGLGEMDADQLAD TTMDPRTRMLRRIRMEDAEQASHIFSLLMGDDVPPRKAFIVENADDFDRSKIDT >gi|148337400|gb|DS264459.1| GENE 193 205501 - 206898 1707 465 aa, chain - ## HITS:1 COG:ML1022 KEGG:ns NR:ns ## COG: ML1022 COG0568 # Protein_GI_number: 15827492 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium leprae # 10 464 99 574 574 421 55.0 1e-117 MATKETTVNTEQTDLTEKTTSGKKASTRKPAAKKSESSKTATKTSRKTAAKKTSAAKKSK KAEEEENLIEQDAPEDDPVEDADLDDFDDDLDDVDDEGEGDDLDEDNIDEDDDSELEDDD EDKRKKPEEPKEKGAFVVRDDDDDDNLTPSGNPKRRVIAAGATADPVKDYLKQIGRVNLL NAEQEVDLSERIEAGLYAQHLLDTESDKMDFKRRRELKWAANDGKRAKDHLLEANLRLVV SLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDWKKGFKFSTYATWWIRQAITRAMADQAR TIRVPVHMVEVINKLSRVQRQMLQDLGREPTPDELARELDMPVEKVQEVQKYGREPISLH TPLGEDGDSEFGDLIEDTDAIAPSDAVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDG QPKTLDDIGRVYGVTRERIRQIESKTMSKLRHPSRSQTLRDFLDQ >gi|148337400|gb|DS264459.1| GENE 194 207059 - 207703 371 214 aa, chain - ## HITS:1 COG:no KEGG:BAD_1012 NR:ns ## KEGG: BAD_1012 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 214 1 214 214 417 99.0 1e-115 MKTIDEPMPICEAEMERLEDQLVEDCKSLGMAESIRDFLQEPFSEWMDELADESSGDDDS SPECRLSRNGAGALAIAMQQTMAVRDALLVSIIVDERRSSRDFLMGFMANPTLPGNTRHL EESLNGSFRDASRKPDTKRCDNGVNMMFDIIGMVPERYHVQPLAIISYVLWWMGDERAML CAMRALALDENCSLAAIICSAAHRHIGPAWAEET >gi|148337400|gb|DS264459.1| GENE 195 207913 - 209001 765 362 aa, chain + ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 17 281 17 286 366 135 39.0 2e-31 MTSSSDLEQIETRTLSLVRDFSFLHADDPVANSCKAVADAVAQQAVTSSEGGKRLRALLT LDAFRAFAPQDVAERDMDAVLDLACAIEVFQTGALVHDDIIDDSDLRRGKPSAHRALATD THSDAIGHGLGIMLGDMLATASVDIANKAACRLGSGSSVVSAFLNMHREVEIGQVLDLAV ELNTLDDPEELASASLNVFRWKTASYTTIAPLEFGMLAAGLAPADARRLALAIGLPLGLA FQLADDLLDVIGSSRNTGKPVGGDIREGKRTVLLADAIEAAGDVERRELIDMWEAESRDE AHVRRAIALFESTGAIARSKERIAGLWLESKAAIETLELSQDRKDMLTEACARFVPIVRE QG >gi|148337400|gb|DS264459.1| GENE 196 209124 - 211295 2012 723 aa, chain + ## HITS:1 COG:MT2232 KEGG:ns NR:ns ## COG: MT2232 COG0515 # Protein_GI_number: 15841666 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis CDC1551 # 9 354 11 343 399 209 37.0 2e-53 MSEAQHAPEGQVIEGRYRVVSRIADGGMATVYQAVDERLGRTVAIKIMHTQLAQGPQRDQ FVERFHREARSAAAIANPHIVQVYDTGEFDGLDFLVMEYVHGVNLRYEMNQQVTFSVRET LRIVGETLDGLASAHRAGVVHRDIKPENILLNDRGHVQITDFGLAKAVSQATLSSTGMLL GTAAYLAPEMIQHNQATPQGDLYSVGIMAWEMLAGKVPFTADNPVTLVFKHVHEDVPDIT TACPGINAGVAAFLARLTARAVEDRPQDASVAFDELQQLQSNLTIDDWQYRLSAVSPAAN DAADTMPGDGTRQMPLPPAPPAPPVRQNDDRTRQFNPENPNKTTVMPAQQADPEATTRLA LEKNDVPANNVPASPSNGPVSGGQPKRSGKRAPVIIAVVAAIVLACAGGGGYAWWYFRGP GSYWTMPQPADLTCSDSEPCRISNIKWNAYEELLKFSNIEYEETEAFSDSVKAGNVISTD PENVGSHVSKRHHQKVKVVVSKGIKQGTVPTDILDATSANGKDPINALKRAGFDNIEQTP ANDDAYSMDVPQGALLDLSVDPGATLPHNAKITVTLSQGPKPVTMPDVVGKSKDEAQQTL DALKLTVNWTEQFDDKIPQGQVISASAKTGDELHWGDSVNAVVSKGPETVTLPNYVGQKA AAAKAALEKLGFSVKISSQLTLDSSQDKKVASQDPVGGTEVRLRQEDGTPNTVTLKMYSS LFD >gi|148337400|gb|DS264459.1| GENE 197 211394 - 212122 893 242 aa, chain - ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 1 221 1 222 244 189 44.0 6e-48 MLYWFFVKGLGPIAIHRLGPTAQGLENIPHEGGAIIAANHLAVIDDALLPLTCPRMIHFM GKAEYFEGKGIKGKFKKWWFTSVGVFPVDRSGGSKSLGALNHAREIIEDGHLFGIHIEGT RSPDGRLYKGHTGAARLAFETGCPIIPAAIIGSRELQKPGQVIPNKGKSKVIYGKPIEVE KKSADQITHDDLRSLTDRVTREIQKMSGQEYVDEYAQKVKAELKAQQEAEAQAQAESAAK KA >gi|148337400|gb|DS264459.1| GENE 198 212173 - 212739 433 188 aa, chain + ## HITS:1 COG:no KEGG:BAD_1016 NR:ns ## KEGG: BAD_1016 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 188 1 188 188 360 100.0 2e-98 MTDLNNSNDDEERPNDASHGGGSPMDDLDAAWAEFADSHADDLKAVERSRSAKRFEKHAQ RREKEALLSIDDLDQGTFTNDAPANGRGPRDFTGSSWLDTDRVMDRYGDDFVPPNPEIGH VKLSKLVFWILLVAGVIGIIASVFVPALASILGSIFGLCALVGAAGLIVQHKGHRETRTD EFDDGARV >gi|148337400|gb|DS264459.1| GENE 199 212841 - 213365 479 174 aa, chain - ## HITS:1 COG:HI1721 KEGG:ns NR:ns ## COG: HI1721 COG2801 # Protein_GI_number: 16273607 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Haemophilus influenzae # 3 172 47 215 216 155 45.0 3e-38 MHNLPERDFDAARPFSRLGTDVTEFKVAGSKAYLAPVYDMASKEIVAWDVSRSPDLGQQR RLPAMLAERLPAGTEPILHSDMGWQYQHQWWRKELERPGIRRSMSRKGNCLDNAAAEQVF GHLKDEFYRGRVFDSYEQFKRELDAYIIHWNTRRRQIRLEGHTPEEFRSMSLAV >gi|148337400|gb|DS264459.1| GENE 200 213434 - 213634 107 66 aa, chain - ## HITS:1 COG:no KEGG:BAD_1018 NR:ns ## KEGG: BAD_1018 # Name: t150 # Def: IS150 putative transposase # Organism: B.adolescentis # Pathway: not_defined # 1 66 189 254 254 129 96.0 6e-29 MPKSTYYHHLSRPAHVSRPDVEPMVREIWERTPNGCGHRQARMCLVHEFGTRISAKTVLR VMRRMG >gi|148337400|gb|DS264459.1| GENE 201 213646 - 214065 299 139 aa, chain - ## HITS:1 COG:no KEGG:BDP_0120 NR:ns ## KEGG: BDP_0120 # Name: not_defined # Def: transposase # Organism: B.dentium # Pathway: not_defined # 1 138 6 190 191 164 60.0 1e-39 MREDRRRRYDDGFRREALELIKSGAGKDTLARRLAIPVYTARNWIRLYRSNGEEAVMGGG GSRRYDWETKVAAARDHVENGLTKTEAMARHGIASIAYLKAKVAYLEKLRALRASKSRGA SEAPSSDCSQGGDTGSTTS >gi|148337400|gb|DS264459.1| GENE 202 214177 - 215232 1389 351 aa, chain - ## HITS:1 COG:ML0883 KEGG:ns NR:ns ## COG: ML0883 COG0547 # Protein_GI_number: 15827406 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Mycobacterium leprae # 4 346 18 364 366 218 42.0 1e-56 MAEITWKSILTKLVGGDHLSAEESEWFVDDLMNGNADPAAVGAVLATQQQLGLTPDEVRG AAKAMVAHAIPLYIDGETTDIVGTGGDGASTVNLSSMGAVVAAAAGVKVVKHGNRAASSK CGTADCFEALGLPMDLTPEQVSEVGNECGIAFAFARTFHPAMRFVGPIRAALGVPCVFNV LGPLTNPASPKHMAVGCANRKMSPIMAAVYAANGQIGMVYTSHEGLDEMAPTGPVSIWEF KDGKVTENKFDPTVELGLAKVTIADLKGGEPTLNAQLARDFFAGKDVSFRTTALLNAASA IVADGHLVPGDASLADRFKAAYAIAEQTVDSGKATALLDKWIAIAQAAKKA >gi|148337400|gb|DS264459.1| GENE 203 215423 - 218299 3753 958 aa, chain - ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 4 913 1 909 940 980 57.0 0 MVDIVDKALRMGEGRQIKKLENVAKATNALEDEIAALDDEELKGQTAKFKQRIENGESLD KLMPEAFATVREASKRTLGLRHFDVQLMGGAALHWGNIAEMKTGEGKTLVATLPAYLNAL DGQGVHVVTVNDYLASYQAELMGRVYRFLGMSTGCIITNQKPPERRKQYNADITYGTNNE FGFDYLRDNMAWEKSDLVQRGHHYAIVDEVDSILIDEARTPLIISGPAEGDVTRWYRQFA RLVLKLNRDEDYEVDEKKKVVGILDPGITKVEDYLGIDNLYEPNNTALIGYLNNAIKAKE LFLRDRDYVVTGGEVLIVDEHTGRILPGRRYNEGLHQAIEAKEGVEVKAENQTFATITLQ NYFRMYDKLAGMTGTAETEAAEFMGTYKLGVLPIPTNKPMIREDKDDLIFRTKKEKLAAI VRDVAKRHKKGQPVLLGTASVESSEVVSSLLDVAKIPHQVLNAKQHDKEAAVVAVAGRKG AVTVATNMAGRGTDIMLGGNVEFLADAKLKSEGYSPDDTPDEYEKRWPGTLAEIKDQVKD EHEEVVKLGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFNTQLV ARVMAKGMPEGEPIEAKSVSKGVRTAQKAVESRNFEIRKNVLKYDDVMNKQRTVIYAERQ AVLKGADIHEDILKFIDDTVLSYIKGANNGSDKPADWDWDGLFKAISSVYPIAVEQEAAK DAVDKLKGDKAVEALKELIVSDAKDQYSDFEDKLGSEGLRQLERRVVLAVLDRKWREHLY EMDYLKDGIGLRGMGQRDPLVEYQREGYQMYNSMIEAIKEETIQLLFHVDIERVAMTEDE ETESDEDEAVNAAEAVMGLDGEAAATGESAPAEPETDDEAEKTTIDELADEQKNEKGIVG MQPISHAEGKVPANKRPKSEELHSPWADGRTFPGTGKNAQCPCGSGRKYKMCHGQNEQ >gi|148337400|gb|DS264459.1| GENE 204 218478 - 219140 998 220 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 [Bifidobacterium longum NCC2705] # 1 219 1 219 220 389 88 1e-106 MEIVVTGRHTQIKQRFRDVVESKMNRVTAIAPDAQRVQIVLSHEGNPRQADTAKRVEITV IAGRTVVRAEASSADEFSALDLALDKLTLRLRRTRDRRKDHRRGYTDPVPVDLGPVEPVV VEEPEPEAPNNSPADAVSADLGPGESVEVQVGDTPIVIRRKLHIAEPMTIDEALYEMELI GHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENVAKK >gi|148337400|gb|DS264459.1| GENE 205 219762 - 220187 272 141 aa, chain - ## HITS:1 COG:no KEGG:BAD_1023 NR:ns ## KEGG: BAD_1023 # Name: not_defined # Def: RecX-like protein # Organism: B.adolescentis # Pathway: not_defined # 1 141 91 231 231 246 99.0 3e-64 MRLLDAAPRPSGALRERLIGKGYTSEVVDDVIERLTRVQLIDDEAYAQSAVRYCATRLMG CRGAVAELTRKGVDRRLAQQVCDEAESYGVFTEAAWELGRRTARKTAGLERDARRRRFWS AGGRKGHNPEILRQIAQELFD >gi|148337400|gb|DS264459.1| GENE 206 220461 - 221603 1541 380 aa, chain - ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 23 356 18 354 376 472 73.0 1e-133 MAQTSAAKNAAQNKSANGIDPRRQAALDTALAQVEKSFGKGSAMRLGDRPEQDVEVIPTG SLALDMALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKAGGVAAFIDAEHALDPVY ARKLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAALVPKAEIEGEMGDSH VGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETTTGGKALKFYASVRM DIRRIQTIKNGDEAVGNRTKVKVVKNKMAPPFKTAEFDVLYGEGISKEGSVLDMALQANV VKKSGSWFTYEGDQLGQGRENVRQFLKDNPELTEEIENKVKAAFGLIKPTDQFAEDDGAE DAAGAPDDGKTSKTSKAAKA >gi|148337400|gb|DS264459.1| GENE 207 221866 - 222099 215 77 aa, chain - ## HITS:1 COG:no KEGG:BDP_1422 NR:ns ## KEGG: BDP_1422 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 77 1 77 77 134 83.0 1e-30 MQEREFWQLLEEVLGRSYGRALAHDQVLDRLNGLTAVEALEMGEEPRVVWNVLCDQMNIP DSKRWGKDHNAPPMPVR >gi|148337400|gb|DS264459.1| GENE 208 222182 - 222691 491 169 aa, chain - ## HITS:1 COG:no KEGG:BAD_1026 NR:ns ## KEGG: BAD_1026 # Name: not_defined # Def: DNA binding protein # Organism: B.adolescentis # Pathway: not_defined # 4 169 1 166 166 226 98.0 2e-58 MDTMTLTKEQMELKAMVPTMQSGNARVRELTPAQRRAVMFAQQQVLRARAAKKAKDERQA ALTRIWREEDAERVSARSMSAATEATDEPREVSLREAIGHVLRDLRTHDHKTLREVSEKA GVSLGYLSEVERGQKEASSELLSSIAQSLGISTAQMLRMVADYLDSVAI >gi|148337400|gb|DS264459.1| GENE 209 222754 - 223320 447 188 aa, chain - ## HITS:1 COG:CAC3586_2 KEGG:ns NR:ns ## COG: CAC3586_2 COG1546 # Protein_GI_number: 15896820 # Func_class: R General function prediction only # Function: Uncharacterized protein (competence- and mitomycin-induced) # Organism: Clostridium acetobutylicum # 34 180 27 160 166 91 41.0 9e-19 MSESENSSTAASQSQCDKLAAAVLRYCEANHFKIAAAESLTGGLLADAFVRIPGASKVFL GSAVTYDIRAKAKILGVNADLLAREGAVHPEVARQMAAGTAQLYRQTEDGDCVIGLATTG VAGPGPDGDKPAGLVYIGCSLPCGFNGIRARQTAAYELRLKGDREAVRHETVQCILEKLR TLSALSQE >gi|148337400|gb|DS264459.1| GENE 210 223327 - 224001 855 224 aa, chain - ## HITS:1 COG:Cgl1919 KEGG:ns NR:ns ## COG: Cgl1919 COG0558 # Protein_GI_number: 19553169 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Corynebacterium glutamicum # 15 219 31 208 208 103 38.0 3e-22 MEKQEERKSSLLDGWNAPPNIVTFSRIVLVVIFLALYVMAGAWGTKNTTMRWVAAIIFII AACTDKLDGWMARKYNQVTELGKLMDPIADKLLTCGTLIVAAIFNEFGNAVLGWVVTALF LVREIGITIMRFFVIDTGGKVIAASQAGKYKTLCQCIGLAMLMLPMWSLADGMNTTPLWM TVYYTITYALIYLALILCLYSGGEYLVNTFGGRKKTAKSEKETK >gi|148337400|gb|DS264459.1| GENE 211 224061 - 226865 2601 934 aa, chain - ## HITS:1 COG:ML0977 KEGG:ns NR:ns ## COG: ML0977 COG1674 # Protein_GI_number: 15827463 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium leprae # 383 919 338 880 886 606 59.0 1e-173 MARTASSNPKSGGKGSAGKSRSGDTKVMDEVDSSPIAGILRKYRRDIACFIMAILAVLFC ASEWFRVQGAFGQVLHAMASGLFGLTSVILPVFLALVVFSLMRKTQNKDENLHMALGWFM ILWSVCSILDAAIASDSQKFDMSLLQRAGGLLGYVLGCPLAWGLSKGFSIAIFVVVILFS LLLITHTRVTQIPDKAKALAAKFVGTPKNRDDIDDEAEQFPNEVRVGDTTLAFAEGVPAH DGTDADGENDDRPGFLTRMKQRFASHKSKNVDDGDLDHYAGDEAFLNAAERHGQTAETIV DEPYQQVDSPRSISSDDYRADDYDSDDYSAAAPSGTTAMPQNGRGRSFSSAPIGTASGTM PSVAEPVPSSEIKPVGVAPSDPWAVIDEDGTSSGKEVMVDAATGEVLDDMPAAAVDGEAA DGIPEGPYHLPDLNILKKGAPHAAHTPENDRVIRALTGTFQQFNVDAKVIGFLRGPSVTM YEVELGPGVKVEKVTNLQKNIAYAVASSDVRILSVIEGKSAIGIEIPNSDRETVVLGDVL RSDKARNDPNPMLTGVGKDVEGHFVTADLTKMPHLLVAGATGSGKSSFINSMLTSVIMRA TPDQVRMIMVDPKRVELSAYAGIPHLLTPIITDPKKAAQALEWVVKEMDARYSDLEFFGF RHIKDFNAAVRAGKVHAPAGSKRKVAPYPYILVVVDEMADLMMVAKNDVESSIQRITQLA RAAGVHLVLATQRPSVDVVTGLIKANIPSRLAFATSSATDSRVILDATGAETLIGQGDAL FLPMGQAKPIRVQGAWVDESEIRRAVEFVRTQRKPHYREDIEEMAKETEKKAIEPDEDIG NDMDVLLQAAELVVSTQFGSTSMLQRKLRVGFAKAGRLMDLLESRGVVGPSEGSKAREVL VQPQDLPQVLAFIKGETSSLTAGSTQPADAADTR >gi|148337400|gb|DS264459.1| GENE 212 227709 - 228695 1201 328 aa, chain + ## HITS:1 COG:BS_ydhT KEGG:ns NR:ns ## COG: BS_ydhT COG4124 # Protein_GI_number: 16077655 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-mannanase # Organism: Bacillus subtilis # 2 164 184 324 362 82 32.0 1e-15 MIPIIFRPLHENNGSWFWWGATHASASEYKELYRYIVDYLRDVKDVHNLLYAYSPGGVFN GDSTDYLATYPGDQWVDVLGYDEYDSDDSADDSSAWINTVVKDMKMVSDQASQRGKIVAL TEFGRSGERKFKESGTGDKDTKFFSELAEALAENVPSTAYMMTWANFGGGGDNFQAYTPW KGSDGEADFKAFADSNKNLMASKDNVDYSNAPAAAMQNGSARIVTPVDGNRVTDTKVVVR VKTEGVKYSDLDLNSAIVTTDRGQNVKLKYSCNGYFTGILDLNAAGINLDQSKLTLTPQV KTKDGKTLAAADGNGSVTVKLVPNQSRR >gi|148337400|gb|DS264459.1| GENE 213 228701 - 230110 1564 469 aa, chain + ## HITS:1 COG:no KEGG:BAD_1030 NR:ns ## KEGG: BAD_1030 # Name: not_defined # Def: mannan endo-1,4-beta-mannosidase precursor # Organism: B.adolescentis # Pathway: not_defined # 1 469 526 1002 1002 834 97.0 0 MEDFDSYDNEAELQSVYSPSHSTKSNLTLVDIPEDNGTKAGNIHYDFVSYPEYNGFQRSH TPKQDWSGFSKLNMFLKADGSDHKFVVQVNAGGVTFEAYPKIDGTDGHVVSLNFGDADGN GGDFAPASWDTAHAGMKLSQKLLSKVGSFALYINDNGGNRPKSGDLTLDSIKLDGKRDAY APNTNPTPGNTAKAQSVDDFSGYSDDAAAQSAWGNRGHTEVLSLDEGPTDGSKALRFKYD FSNGGWYDVAKYLDGANWSGESVLAFQVKGDGSDNAIGLQIGTSDGKYFLASVKLDFTGW KQIEIPLVDNANLTQSWPEDANKDNPMTEDDLASIKELVFASQQWNSESDGLDFSIADIK VEPAENTSNEQTPKDESKTEVKADKEQEQSEDTSADVTAQDPATCPISDEDSKGSTGNTT VTVKPTPDAKEPADNTGKDGLSRTGSNIISAIAAVAVLIARKRKGGDIE >gi|148337400|gb|DS264459.1| GENE 214 230239 - 231249 1318 336 aa, chain - ## HITS:1 COG:Cgl1899 KEGG:ns NR:ns ## COG: Cgl1899 COG0324 # Protein_GI_number: 19553149 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Corynebacterium glutamicum # 15 296 5 286 301 221 46.0 2e-57 MPSATESKPETRKVVSIVGPTASGKTGLGIAIAKALEAKGEQAEIVNADAYQMYKGMDIG TAKASPEEQAEVRHHLIDIIEPDDAMSVARFQEIARAKIAELQAREVRPILVGGSGLYAR AAIDDISFPGTDPEVRKRLEEREKVEGAGALFDELKTKDPEAAARMDPHNPRRTIRALEV IEVTGRPYSASLPHYRYVIPTVQIGLDLPREELDRRIDIRTKQMLENGFVKEVERIRPRL GITAGKALGYQQVVDYLDGLCDLNDTFMSIAQKTKRLARKQMGWFGRDPRIHWLQALNPA LLGNAMAIIEHADAGDYDAIDAQADAYTQHHLGDIA >gi|148337400|gb|DS264459.1| GENE 215 231233 - 232672 504 479 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227395721|ref|ZP_03879044.1| SSU ribosomal protein S12P methylthiotransferase [Haliangium ochraceum DSM 14365] # 25 473 1 460 461 198 30 3e-49 MTEAERASKLAEPAANDTPTRGKGVFYVHTLGCQMNVHDSERIAGVLEADGYVPATEEQY LNHDIDLIVMNTCAVRENAAERMYGTIGLWAELKRERPNLQIAVGGCMAQLDREKIAKKA PWVDAVFGTKNIGSLPQLLDQACIEGHAQVKVQEELNYFPSQLPTDRASKVSSWVAISVG CNNTCTFCIVPTTRGKEHDRRPGDILAEIRQCVDEGAKEVTLLGQNVNSFGYGIGDRFAF SKLLRACGEIDGLERVRFTSPHPAAFTDDVIAAMAETPNVMHQLHFPLQSGSDRILRAMR RSYRSAKFLDILRKIREAMPDAQISTDIIVGFPGETEEDFQETLRVVEEARFASAFTFIY SPRPGTPAAEMEQVPHDVVQDRFERLVALQERITEENLKTFEGRDVEVMVTGASGKKDAA THRVTGREKTGVLVHVGVPEGESMPQVGDFVTATVTHAGRHNLIADPNPEAGQTYAVRH >gi|148337400|gb|DS264459.1| GENE 216 232878 - 233561 918 227 aa, chain + ## HITS:1 COG:SA2297 KEGG:ns NR:ns ## COG: SA2297 COG2357 # Protein_GI_number: 15928088 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 21 214 38 228 230 193 45.0 2e-49 MRLKNVDVGEGSLSPEQITEFIDQMQVYEGAMYEISTKLEILDSEFQVRFSHNPIHHMER RLKSLNSILGKLQRRNLPLTVDAIKDNLFDVAGVRVICNYRDDVYSVANYLSAQSDIQVL RVKDYIKNPKQNGYRSLHVIYAVPVFLSSGPHYTPVEVQLRTIAMDYWASLEHALRYKTD LPDAKLAEHSQTLLDCARSLQNIETQMQNIHRDINSAPRVGEAPQAD >gi|148337400|gb|DS264459.1| GENE 217 233633 - 234607 1283 324 aa, chain - ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 1 312 1 287 303 187 37.0 3e-47 MQRKEIGGMACLVLTAMIWGFAFVSQVQGMASMSPLFFGATRFTLGALSLIPLLWFRRRG IAEQERRRRESNECPTVMLGNGITVAMPKCLGNPVVVSVICGIVLFTASTVQQYGILYSG SAGRSGFITALYIVMTPLLAFLILRRRVTMNVIVSVAIAVVGFYLLCITDGFGSITLADV VLLSTAVLFAGHILVIDTFGQKMDPILLSFGQISTTALLSWIGSLCEGSIDWAGAMQSWF PIVYAGIGSAGVAYTLQVVGQQLVPPSRAAVIMSLESFFSAVGGALLLGEVMTTRAYIGC ALIFIGTVLAQVPVKIPRLLRKRE >gi|148337400|gb|DS264459.1| GENE 218 234710 - 235591 1254 293 aa, chain - ## HITS:1 COG:CAC2831 KEGG:ns NR:ns ## COG: CAC2831 COG0670 # Protein_GI_number: 15896086 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Clostridium acetobutylicum # 78 292 17 230 231 121 38.0 2e-27 MTFGQQPQGNNANGFNGQPYGQNQYNPNQNSYGQYSQNPYGQNQYQYAPQNMYAQGAPAA TIPAQATYSYERAEHASVTRAYGEMTIGLLVTAAVAILTQATGAYIALIQSLGVIGAWAP FVVEIVIAIYLGARIEKIKPSTARVMFYVYAAIMGFSLSTIFMAYDLGTIGISLALCAGF FFALTMLGMTTKVNMLKAGPILLVGLIVLIVAEVLLMIFAPGQTMLMVISAIGLVLFAGM TVYDAQATRALFAQYAGQGEDMVKKVSIICALNLYLDFINMFLYILQLFGDRD >gi|148337400|gb|DS264459.1| GENE 219 235708 - 236478 972 256 aa, chain - ## HITS:1 COG:no KEGG:BAD_1036 NR:ns ## KEGG: BAD_1036 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 256 1 256 256 390 98.0 1e-107 MSGYIAPQQPIQPQPPLQPVYQEEKGLTVFGIVGVVFGALGFVLSFIPIINNIAAIFGFI GVILAIVALVGTFRGKKRGKALAIVAAVLSVLAIVITLAMQSAASKAIDEATGVSSSQSS AKGSAKNQPKGDQDMEGDLKTMHVKIVSAVRSNNDYNNQPTVLVTFEWTNNTDKNNSFAV LASPQVFQNGQALDTAIYSENPAGYDSNSDFAEVQPGATGTVTIGYTLKDDSEVTVDVTD LFDLNDSAKVVHKFTV >gi|148337400|gb|DS264459.1| GENE 220 236475 - 236831 95 118 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MANATSMQNTIHTYTAESWPNRCAANAVCAKHMKPAQTTITMLCQPLVRTGTSMGVGEFV VSLIPTIIGPVPERRHCSSVRFARPKVQTGMTFRPIPVQRGIPYPRKCLNRFEKKERS >gi|148337400|gb|DS264459.1| GENE 221 236641 - 238014 1228 457 aa, chain + ## HITS:1 COG:no KEGG:BAD_1037 NR:ns ## KEGG: BAD_1037 # Name: not_defined # Def: atypical histidine kinase sensor of two-component system # Organism: B.adolescentis # Pathway: not_defined # 1 457 1 457 457 761 99.0 0 MSETTNSPTPIEVPVRTKGWQSMVMVVCAGFMCLAQTAFAAQRFGQDSAVYVWMVFCMLV AFAIGFLLLARSRYPRATFVAACVVVLVFPYDPILALMALTALLARRNDMKTTVRAIVAG GFVTLAAQVRDALRPPEASIWHMVFAKPDTGSQYGTDIIMLADDRTIVITAIVAALLELA IATLAGLHIRSRALASLATAKADAADAQVEQLKTTIDSQQLADAIAAEAHDTLAHSLSLL ALNASALQAESKKLAAEAGSLDAGQLAGQASRIADKTEEIRKQAAGALDEAHSVIDMLRH PEQAKAQLAPSDETSLTRESLDALLGDARAAGMRLNTWIDIQQLGQLNRETGKIAYRVLQ EGLTNASRHAPGAPVSVELTVNPTVGVHAHVSNPTNPSVPAASADATRPAMDSKNAFRTG AGLPGLAERVRQAGGTCRFGFDARHAFHVDVQLPWVE >gi|148337400|gb|DS264459.1| GENE 222 238011 - 238703 365 230 aa, chain + ## HITS:1 COG:DR0987 KEGG:ns NR:ns ## COG: DR0987 COG2197 # Protein_GI_number: 15806010 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Deinococcus radiodurans # 1 213 15 219 239 110 35.0 3e-24 MSSEENSDDRPITVGVIDDDPMICQAMRLILEDYSTGRLNVVFTCTDGGQAVDEAGRHHP DVVLMDVAMPGMDGIEATRRLRALPQPPHVLILTSLSPSGTVERAVEAGAEGFVSKTDAP EDIIRRITDVCDGLPQFNPSSQRQLINDLNMQQPQSRRDEARAMLDALPEREREAVVLAA DGYTNAEIAERMFISERTVKAHISSAGDRLCMGRVQMARLVERADLPDQL >gi|148337400|gb|DS264459.1| GENE 223 238833 - 240935 1944 700 aa, chain + ## HITS:1 COG:HP1397 KEGG:ns NR:ns ## COG: HP1397 COG1479 # Protein_GI_number: 15646007 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Helicobacter pylori 26695 # 3 261 4 261 271 100 28.0 7e-21 MAISATEKPLGKVFTSDYQLTIPSFQRAYTWQAENIEQLVNDLQDACADPDTPYFLGSLI LVKDGPTQYQVIDGQQRLISLSIIVSVLRELEDDPDLIDSLNDLILEPGDKLRGIKAEPR LTLRERDTDFFRMYVQEGDLEGLFDLRDNDIASHAQRNIAVNTRRTFDLLAAMDAKDRRR FASYLVNGVTLVIVTTDDLAGAHRIFDVMNMRGVPLTASDVFKAKTIAEISPAARNAYAT RWDDIMDPLGDDSHTLEEFFSDLHLIVSHKAVCTQLLEEFRKDVLKPYVKKQNVISFIDD LLAPYANAWLILNRPTDANLPDDIVAMLVSLADYQTTDWEPVAMWALVNSIRNLGSANAQ VFSTPGNIGNETTNAHDERLQLHDIDRLHDVLAALERVTGVDSLNRQSPLARRTRAASAI RDLNKGHTLQQIRGFLITDEDRRSALAHLRGELQTSPAMKKLLLIRANEQKAGYRITRPR SLKALPIMPEQVSAKSDFAAWPESVRDHWANRIGNLVLSQANETQVAPLATYAQRRDRML LSASSRRFPLTAELANIAECTPQTLQYRQDEMVRLIADHWNIRYDADDTDLSTLNEETLN VKATVSSPTSKRVSIAQVLEAGLLIAGETLVWERPRKGERWVATVTSEGKLRMDDGREYA TPTAAARAVGGSSAGLTVWKRTSNGQKLSDVWKAYRLRKH >gi|148337400|gb|DS264459.1| GENE 224 240999 - 241703 721 234 aa, chain - ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 231 1 205 208 132 34.0 8e-31 MRVAIADDDPIVCSSLSAILEATGTADVAWTANTGTDAVTQYEMDAPDVLLVDVQMPGMD GLQASEAILDAHPNARILILTTFADESYIAKALEIGTKGYLIKQDVSSVIPAVQAVMAGQ VVMGAEVLSKLRVSPQSTTSDESSSVDRVVSHDDAQAVQGSRNPDSSGPSERFAGLTERE LDVLELVAEGLDNREIASRLFLSEGTVRNRISDILAKTNISNRTKLAVEWLAWH >gi|148337400|gb|DS264459.1| GENE 225 241703 - 242917 721 404 aa, chain - ## HITS:1 COG:DRA0009 KEGG:ns NR:ns ## COG: DRA0009 COG4585 # Protein_GI_number: 15807681 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 182 400 131 330 336 91 31.0 2e-18 MKRLLFQAVFLAMGMIMGVYASGDVGLDLMCGALVAVCCAAVGEYASGSWLAMTLIVMLD CGACLVPAWYLMLPIAAFNAASSSAVVDGSRFLQALVPRWLWLLPMTIVIFRSIGSHVPS DLSIIILMVLQTVLGFAAGLLCTRCANLAREVRRLQDSRRDQIRRLRSQIAENDEDRALA VRTATLAERTRIAREIHDNVGHMLTRAIMQTEAAHVVAQVAGQEQSAQRFCEIHDTVSEA MTLVRKAVHDLKDEGTDFASQIETAAHSMDGAGPLRVRLVNGIDSAPAAVSRCFATAIRE ALNNTVKHSQARNVSITLRDFPALWQLCVQDDGTVRRSSAEAVAMQFIRPNDSTGIGISD IEERARALGGCAICGPYHEGWRVFVSIPKPASGSETTQPEKGAH >gi|148337400|gb|DS264459.1| GENE 226 242914 - 243135 107 73 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488830|ref|ZP_02029679.1| ## NR: gi|154488830|ref|ZP_02029679.1| hypothetical protein BIFADO_02138 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02138 [Bifidobacterium adolescentis L2-32] # 38 73 1 36 36 69 100.0 9e-11 MTSSFLVLHASDSIVVPPDAPDMVRVVTIAGMMSLSNMTNVTFVDAAGCAMRHVHYSGSK RTNQTRIGGREAA >gi|148337400|gb|DS264459.1| GENE 227 243023 - 244120 362 365 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 46 361 6 310 312 144 33 9e-33 MFESDIIPAIVTTRTMSGASGGTTMESEAWSTRKELVMGGRMNDAADAVSAVKVSKLVKR YGDMLALDYFDLDVHQGEIFGLLGPNGSGKTTAINCILALLTFDEGTVRVFGEPISPTSY ALKRRIGIVPQNVAVFNELTVEENIDYFCSLYVSDKAKRRMLVDEALDFVGLRDYRTYRP AKLSGGLLRRLNIACGIAHKPDLIFFDEPTVAVDPQSRNAILEGIQRLNREGATVIYTSH YMEEVEQICDRILIMDHGRHLALGTAEELKAMISTGERISIETDDLGGRSDSADTTLARL RALPFVTNADYDGHELTVNCRQGDHNLIDVLQLLEHEGTNIGHLSSRQPTLNDVFLELTG TALRD >gi|148337400|gb|DS264459.1| GENE 228 244165 - 245415 1251 416 aa, chain + ## HITS:1 COG:no KEGG:BAD_1043 NR:ns ## KEGG: BAD_1043 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 416 1 416 416 737 99.0 0 MWQTLLINLKLHLREKTQLFWLFAFPIILATMFNGMFGNIAESFELHTLDVAVVEDNAWK TSYGAQTLIEGISSESSALSDNHVKVSADGKNGTGLINTTKVESIAQAEQLLADGTAQGM LRIDDGRLRFSVSQSTQSSASDVMASSSGLDISLTVLGNIVDLYNRNTDMMVDIAKHNPE ALMNGKVTGSIGSANGYTKEIQLTNFKPSGTARYYYALLGLAALMAMSFAINVVTMTQAN LSALGVRRSVSPLPKSQQLLAGFLSSWLCSFLSLTVAMLYIRFVCHISLGGREWAGVGAC LMASFAASAFGTLLGALPKIPTGAKQGLCTAIACTLSLFSGLYGSFAMQLSDLIAQRTPV LSLLNPAQQITNLFYDILYYDNFKPFFTTAGILAAMSLVCLAAATVLLRRQRYEYL >gi|148337400|gb|DS264459.1| GENE 229 245402 - 246691 958 429 aa, chain + ## HITS:1 COG:no KEGG:BAD_1044 NR:ns ## KEGG: BAD_1044 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 429 1 429 429 790 98.0 0 MNTYKTALRILKSRKMYLVIYLGFIGIMMFAISWQIMHGSMTGGDEVFHPDTARVAVVDR DGDADGISSALRSYLALDGEMVDLADDSEALQQAVASNYVDLIAIVPHGFASDYQKYLDG SSNDQPTVETVVSYTSGAGSLSQLEVNEFLSLTRTAYLGQAGKQQSMETAMRTALDTAKA DAKTSKIAVVQSPSADTDNTKPAASAFAGTIKTGLYPLLLVMPICTFLVIGTFNDSEIRR RLYSSPTRLVSLQMQEMLTCATFGLVVCVGYTAATLVLMMAAGVPFDGITSTNVALTFVS LLAYTLMAIACGFLLGSVGFSEMAVNAFANVFGLLCMFTSGMAFPIDMMPEPMIMIGKLL PGWWLCVSIDNVFGLGTAAATGVDYGSWASSVGLVALFAVAFICLGLALGRIRRTRPSLA SPTTTQLAK >gi|148337400|gb|DS264459.1| GENE 230 246807 - 247199 381 130 aa, chain + ## HITS:1 COG:BMEI0164 KEGG:ns NR:ns ## COG: BMEI0164 COG0346 # Protein_GI_number: 17986448 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Brucella melitensis # 1 121 12 129 134 92 45.0 2e-19 MIDHITLHVSNAERSIAFYTKALSPLGYIPKAHHEPTIGFSVDDGTPRSDFYISPMDDPA QQPIPTHIAFRATNEQAVRDFYEAAITAGGMDNGRPGPRAYHSGYYAAFVLDPDGNNIEA VTDWSHTSQS >gi|148337400|gb|DS264459.1| GENE 231 247224 - 248585 1491 453 aa, chain - ## HITS:1 COG:FN1789 KEGG:ns NR:ns ## COG: FN1789 COG0534 # Protein_GI_number: 19705094 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Fusobacterium nucleatum # 6 453 8 456 459 231 32.0 3e-60 METIVRTIMPDREFLGHVFKLALPIAFQQLMLSLSSCADTLMLSGVGQNELAAVSLATQF QFLFSLFTAALTLGMSILVAQYWGAGNRDAVERVLGFVMLYAGMLSTAFFLAALLVPEQL MSIMTNDGTLIMLGARYLRISSLSYLFIGLSQMYLCLMKNTGSAVMGMTVSTVGVIVHVV LNAALIYGIGSLGIPALGIFGAAISTVISRAIELAWSVVATRRGPYLRLGHVLHPDGPLQ KDFWKYSLPVLGNELVWGCGFTMYTVIMGHLGADAVAANSIANIVKDLLVCLSLGLGNAG GILVGNLLGRGDFRQAKAMGDRMCVLVAVVGTATGLLIVAARPLALQWANLTPEATRYLS VMLFVCAYYAACGCMTNLTIAGIFPAGGDAKFGLMCDAIVMWLIVVPVGLLAAFVFKLPV LVVYALLNTDECIKMVPALLHYRKYRWLRNVTR >gi|148337400|gb|DS264459.1| GENE 232 248686 - 249351 775 221 aa, chain - ## HITS:1 COG:L1734467 KEGG:ns NR:ns ## COG: L1734467 COG0110 # Protein_GI_number: 15673662 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Lactococcus lactis # 19 207 4 193 203 199 52.0 3e-51 MAENEGAAVAVDNAAVPTNEWERMLSGELYICGDMQREANMRKRRLVHAINTSAYDAFEE RDRLFRELFGSLGKGAFLEPPFNCDYGCNTYIGDNFYANMDCIFLDVARITIGDRVFFGP RVGLYTPYHPIDAAVRASGPEGARPITIGNDVWFGGSVVVCPGVTIGDDVVIGAGSVVTK DIPSHSVAVGNPCHVIRKITDADREYWEGKAAEYRAWKDSL >gi|148337400|gb|DS264459.1| GENE 233 249492 - 250505 978 337 aa, chain + ## HITS:1 COG:BS_ydeC KEGG:ns NR:ns ## COG: BS_ydeC COG2207 # Protein_GI_number: 16077582 # Func_class: K Transcription # Function: AraC-type DNA-binding domain-containing proteins # Organism: Bacillus subtilis # 63 331 41 291 291 128 26.0 1e-29 MNTADEDAQMERDEWASREVMPITNWGRRPDGSEIVQYDAPMFFSFTEHSLLHQYPHMRA ECHWHVDLELTYIIHGHMWYFVNGETVRLDEGQAIFVNSRQLHYGFTKDGSDCEFSCTLL NPAKMCASFEVYDRFIAPLMAENTMPYAVITDDTAPGRRLLATIRQLHAAKFGPLERSAE PLPADDMTLTDNTEALTVLSCFYAVVRDILAIAGSHCATSTAPHPRIVTLRKMIDYVQRY YVRPITLKQIASAGSVGRTTCASIFRESLNQSPIEFVNDVRVRAAANLLVTSSLPIATVA KQTGFSSASFFSRTFHRFMGVTPITYRTTHTKRKSEE >gi|148337400|gb|DS264459.1| GENE 234 250587 - 250805 281 72 aa, chain - ## HITS:1 COG:no KEGG:BAD_1049 NR:ns ## KEGG: BAD_1049 # Name: pstX # Def: non-ribosomal peptide synthetase # Organism: B.adolescentis # Pathway: not_defined # 9 72 3 66 66 115 96.0 7e-25 MNIGLERPIGLEAGHTYHIRLVVDDTIGMLHVDGVALNVRMYERPGESLGVFATDGTVEV RNASIARGLKRK >gi|148337400|gb|DS264459.1| GENE 235 250802 - 251029 370 75 aa, chain - ## HITS:1 COG:no KEGG:Achl_4624 NR:ns ## KEGG: Achl_4624 # Name: not_defined # Def: Glycosyl hydrolase family 32 domain protein # Organism: A.chlorophenolicus # Pathway: Galactose metabolism [PATH:ach00052]; Starch and sucrose metabolism [PATH:ach00500]; Metabolic pathways [PATH:ach01100] # 3 73 4 74 477 99 61.0 3e-20 MKLYYQFPGTWFGDCMPFGKGDEFFLFHQRDNRNPEPFGEPFGWDLATTKDFVDYRDCGV AVPRGGDDEQDQFTS >gi|148337400|gb|DS264459.1| GENE 236 251194 - 252222 854 342 aa, chain - ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 6 340 1 336 341 215 38.0 1e-55 MAKVTLRDVAEAAGVSIATASWAVNDNRDVQITESTRRKVRRAADELGYHHNALARGLAR GRSDIIGFISDGVATSPFAGQVIQGAQDEAWRNGKILLVVVTDGRKDVERRTFSFMFEHQ VEGIIYSKWVHGSITPPDELGRMPSVLVNCYDERGRFPAVVPDEVQGGATATRLLLEAGH RRIAFVNDAAPSPASVGRLAGYKAALAQFDVDFDPSLVLSVTADQEGGYGAAAQVLATGA TGVFCHNDRTALGLYDALRESGKRVPDDISVVGFDNQEVISAHMHPALTTVGLPQYDLGV MGVRTLLRRCGADNDESEIVSERFELVHVQCPAVPRDSVRTL >gi|148337400|gb|DS264459.1| GENE 237 252250 - 254949 3774 899 aa, chain - ## HITS:1 COG:ML1814 KEGG:ns NR:ns ## COG: ML1814 COG1048 # Protein_GI_number: 15827972 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Mycobacterium leprae # 9 899 15 942 944 1172 62.0 0 MSVRDDQLDTLKVGGKDYDFYRIADLPGIDHLPYSLKVLVENLVRNIDGANITDDHVKAL LDWDPAAQPSHEIQFTPSRVVMQDFTGVPCIVDLATMRDAVKELGGDPEVINPQVQSDMV IDHSVQIDKYGVADAVEQNMDIEYQRNGERYQFLRWGQQAFRNFRVVPPGTGIIHQVNIE YLAKVVMTKAGERGRDLAYLDSCVGTDSHTTTVNGLGVLGWGVGGIEAEAAMLGQPISML VPRVVGFKLTGSIPEGVTATDVVLTITDMLRQHGVVGKFVEFYGEGIASVPLANRATIGN MGPEFGSTCGIFPIDNVTLDYLRLTGRSEEQIALVEAYAKANKLWGDATDPDYVEPQYSE YLELDLGTVVPSIAGPKRPQDRIRLSESKEKFEATLPAYETDKTVQDPIAVSTDFRGDFD IKNGDVAIASITSCTNTSNPSVMIAAGLIARNAHAKGLKPKPWVKTSLAPGSQVVADYLK AAGLQDDLDALGYQLVGFGCATCIGNSGPLLPEISEAINANDLTVTSVLSGNRNFEGRIS PDVKMNYLASPPLVIAYALAGTMDFDFETQPLGKDQDGNDVYLKDIWPTNEEVAAVVDGT VSREMFLKDYASVFEGDRRWKGLDVPEGELFAWDENSTYVRKQTFFDGMKATPDPVKDIH GARVLALLGDSVTTDHISPAGAFKASSPAGKYLTDRGVEPKNFNSYGSRRGNHEVMVRGT FGNIRLRNQLLASVGEEITPGGYTYDFLDKKPTTIFEASRDYIDHDVPLVVLAGKEYGTG SSRDWAAKGTVMLGVKAVITESFERIHRSNLIGMGVLPLQFPEGESYESLGLNGTETYDI SGVEELNKGVTPKTVHVTATHADGSTTEFDAVVRIDTPGEADYYRNGGILQYVLRNLMR >gi|148337400|gb|DS264459.1| GENE 238 255031 - 257487 2635 818 aa, chain - ## HITS:1 COG:Rv0908 KEGG:ns NR:ns ## COG: Rv0908 COG0474 # Protein_GI_number: 15608048 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mycobacterium tuberculosis H37Rv # 4 811 6 794 797 491 41.0 1e-138 MPETSEKGLTAAEVAALTESGQVNAVKSSTSRSFADIVRANVFTLFNGIIFAAMVMVLVT GSWRDAVFGLVILINTGIGIITELKAKRTLDKLSILVASDYLVRRDGKDVEVPHNEIVLG DLMWIRSGEQVPADAQIVRTWGLELDESMLTGESRTVRKNEGDDIYSGSTAVSGMALVKV NAVGAHSYAATLTAQAKVYKKTVSDLNKGINIILKFMTFLVVPLCVLLIWSQVHAVGGWD VAISTGQWRSAVVSAVAGVVGMIPEGLVLLTSLNFALAAIRLARKNTLVQELESVETLAR VDCLNLDKTGTVTDGGIMLNEIRMLDGIGANTVDEHAVKQALYDLSNEGQPNGTGLAILN GLGKQGFSAGPVAARVPFSSARKWSSIADDGAVWTMGAPEVVLSHLDGDYADVLRLVNDS AHDGNRVLLIARHDGKAPADYESDPAIDPASRPVALVLCSEHIRDDAEATLAWFREQGVR CRIISGDNPVTVGAIARKVRLTGDAEPRFMDARKLPADITELAKVLENVDVLGRVLPDQK KAIVQALHLGDHVVAMTGDGVNDALAIKEADLGIAMGNAAPATKAVAQVVLVDSKFSHLP DVVARGRQVMANMERVASLFLVKTVYSALISLGVVLTQIPFPYLPRHITYIGALTIGMPA FILALAPNTRRYIPGFLRRVVHFALPGGIATALSILADSWLLPKFMGWDAQHSAAQLGML RGVNAIILLMMGIFVLARVARPLNSWRGGLVLAFAVAGVAGMFIPPVARFFALVIPSGEM LAATGVALVVSAIVFVLCLWCVPKMVAIFSRFKKTRQC >gi|148337400|gb|DS264459.1| GENE 239 257643 - 258236 611 197 aa, chain - ## HITS:1 COG:no KEGG:BAD_1054 NR:ns ## KEGG: BAD_1054 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 197 1 197 197 310 98.0 3e-83 MTGFARRAAAGLLAAVFGISMLAGCTLNNAAVGDTQSAGDAVAHSMKDRNSLDVAMIGSQ DEQTDRLALDAMEAGGLRPVYLPVAGTVDMQDTARQAVEDMAQRMVSIIVISGIDVSGVN HDGWYDTLTTARQAGIPVALLNPIATPTDSTLFAATLTINDRMTDATPLADAVAGIANND PHDRAILVTTISHGGKQ >gi|148337400|gb|DS264459.1| GENE 240 258233 - 259498 1206 421 aa, chain - ## HITS:1 COG:Cgl1857 KEGG:ns NR:ns ## COG: Cgl1857 COG2265 # Protein_GI_number: 19553107 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Corynebacterium glutamicum # 4 420 14 412 412 144 29.0 4e-34 MESTIRIERYADQGRCVGHIDGRVVFVRFALPGELVRVVLDEPHDREDRFWTGEVTEVLE ASEDRVEPVWPLAGPLAMGGGVGGADLVHVSLPGQLKWKSMSIAEQMRRLGHVDVDVPIE RMPEDEAEQGLHWRTRIEMIADENGRPSMRRRGTHVRVPIDTMPLASCALLNVAEKEHVW DGGFTPGSQIRLSVPEPRGNAEIADNYAVLVDGEVTAGNRELTEKVTVCGREFEYGVDAG GFWQMHRHAPIALTGHVMSLVHGELDGAASACLWDLYSGSGLFTLPLATLSAGRTRMLSV EGGKTAVKHAQRNLRAIHLGNVDARVGDVAKTLANVRNDLAKPDIVVLDPPRAGARAKVC RQIAESGARSVVYIACDPASLARDTATLASLGYDLADIRAFDIYPTTHHVETVALFRKAT R >gi|148337400|gb|DS264459.1| GENE 241 259498 - 260238 826 246 aa, chain - ## HITS:1 COG:no KEGG:BAD_1056 NR:ns ## KEGG: BAD_1056 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 246 1 246 246 438 99.0 1e-122 MAETETKKRTGLGALADAGDADDFSVIDAIGGPRGVVESMLPGVVFVVMFVITSDLHLTI GVSAALAVLQVIVRLCQRQSVMGAVSGLLAVGICLIWAWNSHEARNYYMFGFLTNAFYIV LLAISLMVRVPGLGLVIEFIRTLPTEHLRAWLADWRGDKALNRAYTIITALWIGVFSLRL VVQVPLYLSNQVGWLGTARLLMGIPFWALAIWVSYLIVATPMHRHKTLAEPNADAMDDNN ETEEQH >gi|148337400|gb|DS264459.1| GENE 242 260268 - 261116 1135 282 aa, chain - ## HITS:1 COG:no KEGG:BAD_1057 NR:ns ## KEGG: BAD_1057 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 282 1 282 282 458 100.0 1e-127 MGLFGFGKKKRQSEEAAEAAAEENDKADEAISETAEAPAGGIQETILPEPSDEYDGRGDE HGPWDVDDENVPDYDEYLDMGAYYLPFLQGIELRVKANRATQQVLGTTITYGSSSVEIEA FAAPKTMGLWDDVRADLVEANKDAKETDGVFGTELTLPVVVKGGRKVVTRIVGVDGPRWM LRGIFSGKAATDPDHAETKALNQLFSNIVVERGEDPLAPRDLIPMHPPVAPAERKAAKEA AEAEQAGRTMDIPGQPKGPFDSDQQVEVKTTLSRGPMFSEVR >gi|148337400|gb|DS264459.1| GENE 243 261239 - 262099 922 286 aa, chain - ## HITS:1 COG:RSc0140 KEGG:ns NR:ns ## COG: RSc0140 COG0708 # Protein_GI_number: 17544859 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 3 285 2 256 261 182 37.0 7e-46 MTITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDPIFDEFGFEYATAG RIADQSGLDRMNEICRIKGRAGVGLLSALPVIDKRYGLPGLAEDVDSGRWIEADVKTPQG YTVTVVCVYVHAGNTDDPEKMKQKYRFLDTMLVRMGQLRDEAAHGGKQAVLCGDFNIAHT PLDIKNAKANEKHAGFLPEERAYVDKWLGELEFVDVMRSLCGDIQGPYTWWSQRGRAFDN NVGWRIDYQFATPELAETARGFVIDKAPTYDLRWSDHAPLSITYDV >gi|148337400|gb|DS264459.1| GENE 244 262173 - 264182 747 669 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 256 660 145 524 563 292 42 2e-77 MTEMNTENNLEAMQRAHGPLLEVKNLQVDFTTDEGKAVHAVRNSSFSVYPGQWVAIVGES GSGKSTSAMAVLGLLPGTGHVVGGSIKLDGQEISGFKQKDFDKLRGSKMGLVPQDPMSNL NPVWRIGTQVKEALVANNMDIDHEKRSEFAKALAGDEVELKGNDDETFLGSKELPDLIAA AKEALVKIGKSGDELDKIMARFAEEWVPGSETRWRVADGLIKAGVKDDDAWYIAKKYVVG STMGDRIAGLLSEAGLPDAATRARQFPHEFSGGMRQRALIAIGLACRPELLIADEPTSAL DVTVQKKILDHLHMLTDSLGTAVLFITHDLGLAAERAQHIVVMYKGQVVESGPSLEVLQH PQHPYTKRLVAAAPSLASQRIISVKEHGGDATAVMEHAVNEDSLKKGEAIITVDHLTKEF KLPRKKEMFKAVDDVSFSIKKGTTLAIVGESGSGKSTVANMVLKLLEPTAGTVTYDGKDI SGFKGKELLDFRRHVQPVFQNPYGSLDPMYSIYRSIEEPLRIHGIGDKKSRAKRVRELID MVELPESVMSRYPNELSGGQRQRIAIARAMALDPDVIVCDEAVSALDVLVQDQVLRLLND LQAEKGLSYLFITHDLAVVRQIADEVVVMQHGKLVEHATTDEVFDHPKKQYTRDLLDAIP GGKLQLGLD >gi|148337400|gb|DS264459.1| GENE 245 264204 - 265172 1282 322 aa, chain - ## HITS:1 COG:Cgl1946 KEGG:ns NR:ns ## COG: Cgl1946 COG1173 # Protein_GI_number: 19553196 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 12 320 34 342 344 357 59.0 2e-98 MTEMNETNPSTVLPGQERYVAPLDETPLKAVDSMDESAPASNMWADAWRTLRKNPLFIIS GLLIIFIVFVALFPSVLTKQNPNYCTLDNSLEPASSGHPFGFDLQGCDVYSRVVYGTRTS LSVGVFATLLVVLLGTLIGAIAGFFGGWVDAVLSRLTDIFLALPILLGAIVVLQMFKTSS SIWKIILVMTLFGWTSVARIARGAVMEAKNLEFNTASTALGSTPIRNLFRHILPNSLAPI IVVGTTSLATYIVLEATLSFLGVGLPTTTVSWGGDISNAQSILRTDPMVLFYPSAALAIT VLAFIMMGDAVKDALDPKSRTA >gi|148337400|gb|DS264459.1| GENE 246 265193 - 266119 1417 308 aa, chain - ## HITS:1 COG:Cgl1945 KEGG:ns NR:ns ## COG: Cgl1945 COG0601 # Protein_GI_number: 19553195 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Corynebacterium glutamicum # 1 308 1 308 308 357 62.0 1e-98 MGKYLLRRILQMIPVVLGTTLLVYALVFALPGDPVKAMFGDKPVNEAVAAQIRAEYNLDK PFIVQYLLFLKNALTLDFGKTFSGQLVIDVIGRAFPVTIKLALMAFVFEAVFGVIFGVIS GLKKGKWCDTVILIFSLLLISVPTFVTGFLCQYFLGVKWHLLPVTAGANPGFLDLLMPAM VLGSVSMAYIIRLSRTEISSNIALDYVRTARAKGMDNKSVMLRHVLRNSMIPVVTYLGQD LGALMGGAMISETIFNVHGIGYLTYQSILKGEGNLVVSIVTLLMLIFVVCNLLVDMLYAA LDPRIRYA >gi|148337400|gb|DS264459.1| GENE 247 266447 - 268108 2712 553 aa, chain - ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 39 551 42 534 534 461 48.0 1e-129 MNSMKKKALAFAAAACAFGMLLSGCGSSNGDSTADKGSNVITAYNSEPQNPLIPGDCNET GGGKPLDLLFARLISFDAKGNASNEVAESIKSNDDATQYTIKLKDGWKFTDGTPVTAESF TKAWSYTANAKNAQLGSSFFSTIKGYDKLQDGDKLKGDEQLEGLKVVNDHEFTVDLNRSD SVFAIKVGYTAFAPLPESFFKDPKAFGEKPVGNGPYKFQSWDHDNQIVLVKNPDYKGNRV AKNDGVTFKVYTKDEAAYADIQSGSLDVMESVPASATKTFQKDSTVQAYNKAGSVIQQFT IPAKLKHFETDTEEGTLRRQAVSMAINRENICKKVLNGTGTPAADFTSPLTPGYSDSLKG SGNLKYNEKKAKELWAKANAISPWTSDDKFTFAYNADGGHEVIYTAVVNSINNVLGAGVA ATNPYPTFNDFRTAVSDRKVNGAFRSGWQPDYPSAENYLVQNFASAAADGNGSNDGDYKN PEFDALCDKAAASKSVADANKLYQQAQEVLLNDLPAVPLYYANAYGVASTGVSGFEMNWQ NLPVYENMTKSGK >gi|148337400|gb|DS264459.1| GENE 248 268402 - 269328 845 308 aa, chain - ## HITS:1 COG:ML1600 KEGG:ns NR:ns ## COG: ML1600 COG0582 # Protein_GI_number: 15827839 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium leprae # 7 308 4 297 297 238 48.0 1e-62 MCFDDALDGFDAYLKANRGLSANTRRAYRSDVEECLVALRKQGCVDLNEVTIEDLRLWMA KSSKNHARSSMARKTVAVRGFFAWAYDHDMASANPAASLQTPKIPDTLPAVLNETQAQQL MDRVDEDGMEARSQEPNMKKQAIALRDAAMLELLYATGMRVAELVGLDVADVTFGNRTVK VTGKGDKQRVMPFGAPADKALRDWLEHGRPVLCGDMSDDAFFLGSQGGRIGQRMVRKVVH DRARKAGVPDISPHALRHSAATHMLDGGADLREVQEMLGHSSLKTTQRYTHVSIEQLKAR YGQAFPRA >gi|148337400|gb|DS264459.1| GENE 249 269495 - 270337 303 280 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 22 238 4 219 223 121 34 6e-26 MTRHSIHDVQHPTAENRDDGIVASAIDLTKVYGSKDNEVMALDHVNVEFKRGEMTAIMGP SGSGKSTLMHCMAGLDAPSSGKVMVEGLEVSSMNQKQLTDLRREQIGFIFQSFNLVPTLS AEENILLPLQIAKRPIDRDWFNQVVKVVGLEKRLTHRPSQLSGGQQQRVACARAIMARPS VIFADEPTGNLDSRSSREVLGFLRDSVRDYGQSIVMVTHDPRAASFADRVLVLADGNITR DMQHPTYNEILEVFAGDDDIDDVPAANMVAPSTATEGAQA >gi|148337400|gb|DS264459.1| GENE 250 270334 - 273180 3140 948 aa, chain + ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 1 655 7 630 853 215 29.0 4e-55 MIRIGLRDARSHFGRFIMSIVAIALGVSFVVGSFCFREMLNNQVSQMMSTNADHDVYVRG SQEKKKDSSAMSMGSTKSYNDVGVDLAGTIAKVDGVSSARVVHMLSGVVLLDKHGDAVTT MGSPTLAIGMGKSSPWRSAKFTTGTWPKNGDEIALHSFAAEQSGLKVGDKTKIVYPDGAH KVTVSGIFTTDASQAGAIIIAIDPATAKEQANKQSDDPDKTALISVYGNKTTPLDDNAQQ QLADRINKALPRSAKAHAITGDEYRDESTKSTQDALGFIQPLILIFAVIALFVGSFIIAN TFSMIVRESMRGYALLRSIGASPLQVFSTVIVQALLLGLVGSLAGIGLGWGMVKLIASGL ANMGMPLTGATNPTVSDMLVGLVVGIVVTLIGAALPARNAALAPPIQAMNETVNPEKPVL ARGILGTVMVLLGFLSWGFTYALAAADGDGGPTPWKALNSIAVGWPLGIGAALAVIGVIV AGPAYVSTAGAVLGWLPSKAFTVTGRLAQRNISRSKRRTSNTAAALFVGVAIVSCLGVVA TSAKASVNSLVDTGLKADFAVSSASAGQIPDQAIKDIKKVDGVNHVVSNRVVLGVKYDGK AINGFTFATQPELFTKIFAAETTEGDAAAALKDGKLLVGKTIADDRGWHVGQKVKATAEN IVVDKEATAKAQADYQAKVQAHVQELQSQAQQLAASGDLTGAQAKASEIEQYTNDAKNVD PKTLVKTKKVTTGKTLTIGAIVSNSVYRDFAIVNDDLAEQIGNKQTMFVIQAFVTDKRGA DTAQVKKALKKTIKKYYTIVVFDRDEYKSTMSSMIDQMLMVLYALLALSIIIAIFGIVNT LALSVSERTKEIGLLRAIGTSRGQVRGMLGIEAAIISVFGTVLGLVVGIAAGVVIRAVYA SEGLETLAIPWLQLLVFLLLSIVVGLVSSISPASRALKQPVLDAVASE >gi|148337400|gb|DS264459.1| GENE 251 273215 - 273472 255 85 aa, chain + ## HITS:1 COG:no KEGG:BDP_1497 NR:ns ## KEGG: BDP_1497 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 84 1 84 85 118 78.0 6e-26 MPIPNEIPVGARIVVRTLEGVDPTDHRMKFRDYVGHVRSWDSQKLEMTRDAAANGSRPEQ RVTIPADEIVTIKPVPERSMTRPRP >gi|148337400|gb|DS264459.1| GENE 252 273570 - 274610 1212 346 aa, chain - ## HITS:1 COG:MT3861 KEGG:ns NR:ns ## COG: MT3861 COG0287 # Protein_GI_number: 15843374 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 4 266 8 273 323 133 35.0 4e-31 MVKPRIAIVGLGLIGGSLARRLVNAGCEVTAWNHNDRPYATAEADGIICKPTLAALAETK PNVLVLCNPLKAMPEILGALKPLIDTETTTLTDVGSVKGMVRDQVKAIGLDGCYVGAHPM AGNELSGWEASDPTLYDDALWAITVDEHTEYRRFRAVADMIVNRCGNRLIVLDDATHDRC AALISHMPHVIATAMINELVANPNRNIAAALAAGSWRDMTRVALTDPNRTRAMVEEDAAN VETLLRNMANRLTLVANVLHDMADTGVRPTEGDVKQMDRFFTQGQPFRDYKAASRQPEYA EHCATVELSIPENDWQRTLLESARRGEHIVRFDGERTAIAQARSVV >gi|148337400|gb|DS264459.1| GENE 253 274604 - 275614 1112 336 aa, chain - ## HITS:1 COG:Cj0316_2 KEGG:ns NR:ns ## COG: Cj0316_2 COG0077 # Protein_GI_number: 15791684 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Campylobacter jejuni # 18 282 7 258 273 97 27.0 5e-20 MTRNKEAQAAMSARKLFYLGPQGTFTHQAAVNAAQELARLEPQGFDLMPMDDVPQILDAA QHGDGWGIVAWENNVEGYVVPNLDALIDAKDLVGFARVGVNVEFDAYVAQGADPAEARIA TAHPHGLAQCKRFIAEHRLSTQPATSNAAACRDLIPDEIAFGPAICGELYDITRIGTAIQ DYQGAATDFLVLAPRAEVARLLAKPRAEANVEYESVLTLIPLVTGPGVLANLLDVFRDAG LNMTSFISRPIKGRTGTYSFIVTLDAAPWEERFRDALVEIAEHGDWAKTLAVYPRRERPN PPVTSWMLPQGGVRLDDSHLPDDWQNDETVRRELMW >gi|148337400|gb|DS264459.1| GENE 254 275654 - 276214 557 186 aa, chain - ## HITS:1 COG:no KEGG:BAD_1068 NR:ns ## KEGG: BAD_1068 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 186 1 186 186 358 98.0 8e-98 MTQRTQETQPEPQSQSQDGIDRRLLPWSHRLPVWARFLVDLLAGAVVGVIGTMAHRMGAS ANIPYGLVIAYALAIISTWSARSRDGVSGLALHLISSSLVVWTVMAGYGPGGDAMIPVGF GETATLPYFSNNAGYFWLYGVVLIPLIMLALPKSWFTMPTRTEDDSTEYDQNESSEPDHD TAQPVD >gi|148337400|gb|DS264459.1| GENE 255 276365 - 278296 2802 643 aa, chain - ## HITS:1 COG:ML1498 KEGG:ns NR:ns ## COG: ML1498 COG1217 # Protein_GI_number: 15827789 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Mycobacterium leprae # 8 621 4 612 628 714 60.0 0 MAVRGDIRNVAIVAHVDHGKTTLVNAMLAQSHVFNEREEVPDRVMDSNDLEREKGITILA KNTAVQYTGPLAAKYGHPEGITLNIIDTPGHADFGGEVERGISMVDGVVLLVDASEGPLP QTRFVLRKALEAKLPVILCVNKTDRPDARISEVVGESSDLLLGLAQDVIEEGIDLDEDSL FDLPVIYCAAKAGYASENQPENGGLPDNDNLEPLFEAIIKNIPAPEYEEGAPLQAHVANI DSSDFLGRLGLVRIYNGTLEKGKTYGLSRVDGSIENFRVSELLRTQGLERTPVESAGPGD IVAVAGVNDIMIGETIVDPDDPRPLPLIHVDDPAISMTFGINDSPLAGTEGKDHKLTARM IKDRLDRELIGNVSIKVLPTDRPDAWEVQGRGELALAVLAEQMRREGFELTVGRPQVVTK TIDGVVNEPMENTTIDVPEEYMGAVTQLLADRKGRMDNMTNHGTGWVRLQFTVPSRGLIG FRTALLSATRGTGIASSISAGYAPWAGQIVTRQNGSMVCDRQGVATPYAMQRLQARGNFF VEPQSPVYEGQVVGINNKPDELDVNITLAKHMTNMRSATADVLETLTPPIKMSLEESLDF ANEDECVEVTPESIRVRKIILSREDWYKWRAKQRRQNNAQNNK >gi|148337400|gb|DS264459.1| GENE 256 278488 - 279843 1644 451 aa, chain - ## HITS:1 COG:Cgl2919 KEGG:ns NR:ns ## COG: Cgl2919 COG0477 # Protein_GI_number: 19554169 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 12 451 1 439 439 386 54.0 1e-107 MSASQQTVGGEVSLTRNERLDRLPFNKAHRKLLVASGIGWAFDAMDVGLVSFVVAAIAAD PHFNLTPTEKSWVLSIGFVGMAIGAALGGFVADRVGRKTVFSATLVIFGLANGGMALSWS LAALLIARLVIGLGLGAELPVASTLVSEFSPTKQRGRMTVLLESFWAIGWVIAACIGYFV IPNTGDWGWRWALLIGALPLLYAIVTRIHIPESVRFLESKGREDEAEQAVRYFEQAGGVE PVASPKGEPLPKIKTRELFGKKYLARTAAIWATWFFVNFSYYGAFTWMPSLLADQFGSLT KSFGYTLAIAIAQLPGYFLAAWLVEIWGRRKTLSVFLAVSAVAAFAFSQAGSVAAVLGFG MLLSASNLGAWGVLYAVTPEIYPTRLRGAASGAAAACGRVAAIIAPLLMPWFLTLSGGNK AVAFIVFAVAFILACVAALCLPERTGKELED >gi|148337400|gb|DS264459.1| GENE 257 279911 - 280720 622 269 aa, chain - ## HITS:1 COG:Cgl1046 KEGG:ns NR:ns ## COG: Cgl1046 COG1051 # Protein_GI_number: 19552296 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Corynebacterium glutamicum # 16 234 1 206 206 193 48.0 3e-49 MIMGNVSERRKQPPQVGVSVVILALGPVPQSDVGAGAASSGMGSTLWMPLVKRVRQPFLG QWALPGGGLRADHSLEQSAYAALESTTSLHPKYLEQLYTFGDPARSHGGLPMVSIVYWAL VGEADGRIDFAGGDNVKWFPVNHLPELAFDHRTIVEYAINRLRGKIESPDIATRLVGERF TLSQLHDVYEAIAGQRIDLANFRRKMLASGLLEDTGEKLRIGRNRPAAVYRYSRKPGTDL WTEAGTASESDDTRIAFQDDDALSALMTA >gi|148337400|gb|DS264459.1| GENE 258 280848 - 281687 1061 279 aa, chain - ## HITS:1 COG:Cgl1387 KEGG:ns NR:ns ## COG: Cgl1387 COG1192 # Protein_GI_number: 19552637 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 5 274 16 286 290 306 55.0 2e-83 MPTDLLGRDYETFPAPEPLQTHGPAKVIAMCNQKGGVGKTTSSINIGGALSQYGRRVLIV DFDPQGAATVGLGINANAVEDTVYTALFNPRMDVHSVIHHTDFENLDIMPANIDLSAAEV QLVTEVGREQVLAGVLRQVKDEYDVIIIDCQPSLGLLTVNALTAADGVIIPVAAEFFALR GVALLMQSIEKVQSRINPSLEVYGVLVTMYTRTLHCEEVLQRIYEAFQGKVFHSVISRSI KLPDSTVAAAPITIYAPNHKTAKEYREVARELIANDIVA >gi|148337400|gb|DS264459.1| GENE 259 281786 - 282739 667 317 aa, chain - ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 7 316 6 304 304 256 48.0 3e-68 MTDIERLIDQFLAYIDVERGLAKATVRAYDSDLRKYNGWLATQGIQDLNAVTTQDVERYI AFLDDSGESARSKARRLASIHAFHRFALNEHVVSNDVAAQVKAPKGATTLPDVLTVDEVA SLLDAIPVSQNRPQSEGMADMPDDPAMLRDKALLEFMYATGARVSEACGANLDDVDLESN VARLMGKGSKQRLVPVGSYACEAIARYLKNGRPQLESKAKGPTERRALFLNKRGKRLSRQ SVWEIIRAAGERAHIDKPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQIYTHV SPENLIETYLTSHPRAR >gi|148337400|gb|DS264459.1| GENE 260 282985 - 283368 635 127 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026092|ref|YP_909937.1| 50S ribosomal protein L20 [Bifidobacterium adolescentis ATCC 15703] # 1 127 1 127 127 249 100 2e-64 MARVKRAVNAHKKRRVVLERASGYRGQRSRLYRKAKEQLLHSFTYNFRDRKARKGDFRKL WIQRINAAVRAEGITYNRFIQGLHLAGIELDRRALAELAVSDPEAFKAIVEQAKAALPAD VNAPKEA >gi|148337400|gb|DS264459.1| GENE 261 283421 - 283615 317 64 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119026093|ref|YP_909938.1| 50S ribosomal protein L35 [Bifidobacterium adolescentis ATCC 15703] # 1 64 1 64 64 126 100 1e-27 MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRELKADGVLATSQSKNMKK LLGR >gi|148337400|gb|DS264459.1| GENE 262 283634 - 284332 894 232 aa, chain - ## HITS:1 COG:Rv1641 KEGG:ns NR:ns ## COG: Rv1641 COG0290 # Protein_GI_number: 15608779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Mycobacterium tuberculosis H37Rv # 7 184 1 179 201 187 59.0 1e-47 MRIGVIISDEPRINDEIRVSQVRLIGPNGEQVGVIATSVALNLAKEANLDLVEVAPNAKP PVAKLIDYGKYKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFDVKKGHVVRFLNGGD KVKVTIMLRGREQSRPIGGVELLQRLASEVEEYGTVEFAPKQEGRNIIMTLAPKGKKVHT QSEQRRRGDQSRAERQARQAARLAAKQEAQAAAAAAAKAAVASDKPKTSETK >gi|148337400|gb|DS264459.1| GENE 263 284621 - 286507 2679 628 aa, chain - ## HITS:1 COG:L0095 KEGG:ns NR:ns ## COG: L0095 COG0367 # Protein_GI_number: 15674210 # Func_class: E Amino acid transport and metabolism # Function: Asparagine synthase (glutamine-hydrolyzing) # Organism: Lactococcus lactis # 1 625 1 623 625 861 65.0 0 MCGIAGFVNDMPIDVKCPVLQRMTDMIAHRGPDSEGHYIDEHAALGHRRLSIIDLGGGQQ PIYNEDGSKVITFNGEIYNYQTLREELIAAGHTFTTKSDTEVLLHGYEQWGVDLLQRVRG MFTFVIWDKNKQELFGARDHFGIKPFYYAKMNGTFMYASEIKSLLRHPDFVKELNAEALK PYMTFQYPAIGETFFKGVYKLPEGHYFTYRDGKMDIHRYYDEDFREGKQKLGELVNSIDQ TVCDSVKAHQIADVEVGSFLSSGVDSSYVAAVARPQHTYSIGFGKGTYNESQQAGELAEL LKLNNTAESLTDEEAFAAFPRIQWHLDEPDSNPSCVPLYFLSALAAKDVKVVLSGEGADE LFAGYIDYGVHTKFRPIKVVTRWLTHLPAGARKAIARFCKGKTFPGAWHLYANLAPAEES FIGQARVFEESQSEQLLKPEYRKAPSVQSIVDKTYARVEGKGLSELKKKQYLDMHQWMPG DILLKADKMTMAHSLELRVPLLDKELMGVAEQVPTKYLITDENTKYAFRQAAGRHLPKEW YDREKLGFPVPIKKWLREEKFYKYVRSVFERDYVSQFFDQDALLKMIDDNYAGKTDDRRK IWTVYSFLTWYDVYFVHDGEKPDVIAIA >gi|148337400|gb|DS264459.1| GENE 264 286696 - 287442 678 248 aa, chain + ## HITS:1 COG:TP0518 KEGG:ns NR:ns ## COG: TP0518 COG1564 # Protein_GI_number: 15639509 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Treponema pallidum # 24 149 22 162 230 63 32.0 2e-10 MDSHDARTCVIFGAGDYYDETPAIPDDAFVVAADGGLDHVRAFGIDADFVVGDFDSITGG RPTQNDRTIALPSEKDDPDLLSALKIGWLRGARTFHIYGALGGRIDHTISNIQLMALLAD RGATGYLHGDGSIVTAICDGALDFPADDAVAGRMVSVFSHSDISTGVSETGLKYELHHAD MSSTRVNGLSNEFLAGRPSRITVEHGTLIVTFPIEAPLPHVARWHGFSGDLGALDTDVSS ALVEPSGR >gi|148337400|gb|DS264459.1| GENE 265 287614 - 288669 1602 351 aa, chain + ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 4 349 3 333 333 380 57.0 1e-105 MTVKIGINGFGRIGRLAFRRIFELQARGGQAGDIEVAAINDLTTPSMLAYLLKYDSTHGT FRHDDGTPVEVTSTDDSIVVDGKEYKVYAEKDANNIPWVKNDGVEFVLECTGFYTSAEKS QAHINAGAKKVLISAPAKDETTPTIVFGVNHETLKASDVIVSAGSCTTNSMAAMVKLLDE NWGIKAGFMTTIHAYTGTQMILDGPRFPKARNNRAAAINTIPHSTGAAKAIGKVVPSVNG KLQGHAQRIQVPDGSVTELTTVLNKEVTADEINAAFKAAFSDTDFYGYNEDGIVSSDIIG DTHGGVFDPTQTDVNTVDGLTMARTVSWYDNEYGFTCNMVRTLLYFAEISE >gi|148337400|gb|DS264459.1| GENE 266 288787 - 289302 639 171 aa, chain + ## HITS:1 COG:YPO3088 KEGG:ns NR:ns ## COG: YPO3088 COG2606 # Protein_GI_number: 16123265 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 16 169 2 156 159 124 45.0 8e-29 MGGMAKKKHEKGAGSTPATVQLEKAGVPFKTYEYAHSNDHMDDGYGVEAATKLGFDEHQV FKTLMADTGSERVVGVVPVSGHMDLKALAAAVGAKKAAMADPKVAMRESGYVVGGISPLG QRTHHKTVLDESALQYDEILLSGGKRGFSVGVNPNDLLKVLDAVAAPIGTW >gi|148337400|gb|DS264459.1| GENE 267 289395 - 290399 384 334 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 4 331 2 297 676 152 30 2e-35 MGKRIVLADPRGFCAGVDRAILTVRTILKSADTPRADGLPPVYVRRQIVHNKHVVEDLAA QGAVFVQELAEIPDAAAEAGIPIVFSAHGVSPAVKAEAAARGMHVVDATCPLVSKVHREV LRFVKEGYEIIYIGHKGHDEAVGVVEESPEHVHLIEHASDVDSLDFQPDTKLVLLTQTTL SVDETAGTITALKARFPWLEMPPNSDICYATSNRQAAVKLVAEQADCVVIVGSANSSNSV RLMEVAQEGLNARYASKTAVGAAGRAHRVDDASELDPAWFEGVESVGISSGASVPDELVS GVVAALQELGYQDVSTIETIKENMHFVLPAELRK >gi|148337400|gb|DS264459.1| GENE 268 290586 - 291536 1212 316 aa, chain + ## HITS:1 COG:ECs4802 KEGG:ns NR:ns ## COG: ECs4802 COG2017 # Protein_GI_number: 15834056 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 # 10 305 9 288 300 143 30.0 4e-34 MTCTNLPPRTGQQFSISHGDYHAVVTELGATLRKLTYQGEDIIVSPGPDDMVTCCHGQLL IPFPNRIENGEYTFEGKTYTLPIDEHERHNAIHGYGKRAFWKLVSLKEDAVTLSWRAPNM EGYPFDIVVTATYSLADDGLHLNISAYNNGDADAPWALAIHPWLANGFNGYGDEIDAHNA KCSLTVPGRTHVTVNENLIPTGTEPVDGTKYDLRKDTLLTEQPFDDAWTDLEHAEDGTVT AVFTRPDGKKVRVGGDETVTSFQVCTGTGFPAIKHPAGVAVEPQTAYANAFNTGKDLIVI KPGETSSTALFIGMLD >gi|148337400|gb|DS264459.1| GENE 269 291652 - 291726 129 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGMRGRKRKDRRKKAANHGKRPNA >gi|148337400|gb|DS264459.1| GENE 270 291883 - 292134 230 83 aa, chain - ## HITS:1 COG:no KEGG:BAD_1083 NR:ns ## KEGG: BAD_1083 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 83 1 83 83 119 100.0 3e-26 MSEPMERHISITSTTTNTNGVVTQVTHASVHVVASGDCFDPETCCDERERALIAAMRAYL RPKHAPQSLIDRLEATLDHCCDE >gi|148337400|gb|DS264459.1| GENE 271 292131 - 292676 678 181 aa, chain - ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 1 174 102 273 284 135 44.0 5e-32 MPVVDSLYRQAMKLTNNPDDAQDLVQDTFERGFKAFDSFKEGTNFAAWMTTIERNAYFNQ YAKAKRRPQRANDSTGEYDDWDLYSASEHSSEQLKSAEQEYLDAYAPEEIMAALNRLSPE RRQVFIDAAIDGKSYSQVAEEQGVKIGTVMSRLNRARTQLKRELANYAKERGYATAGKDR P >gi|148337400|gb|DS264459.1| GENE 272 292843 - 294396 1874 517 aa, chain + ## HITS:1 COG:L53929 KEGG:ns NR:ns ## COG: L53929 COG0769 # Protein_GI_number: 15673788 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Lactococcus lactis # 3 506 2 475 483 293 37.0 6e-79 MALTLESAARLLDRHGLLREIIRGDVWTLDPHDIKGFDEPFSAITYDTRKVEPGTFLCCK GRFKAEYLQGIDERGLAAYVSENDFSDATQAPGLIVDDVRKAMALLSAEFYGRPQDQLKV VGITGTKGKTTTAYLTQAMLNGCSGGKCALFSSVDNCLDGHTYVESDLTTPESMDAFRMM REAVDNGMEYLVMEVSSQAYKVDRVFGLTFDVAAFLNISPDHISPIEHPTFEDYLHCKRQ IVKNCRALVLGADCARADLIRQDARHASVPVTTFALGGDSTADVMAAPANDDHSRFSIVI DGASIGELSLTLDGDFNYANTAAAVAIARAAGFDFGSAQAKDALREMEPVRIAGRMEHFK DTRSNTIAIVDYAHNYASVTALLDYVDQRYGSEKPEITLITGSAGNKAYDRRAEIVHAAQ DRIDHLVLTFEDTDDEPVEQVCADMNDSVTNPQLDVKTILDRAEAVETTVSRDRKDPEHL HIILIIGKGNERWFKDHGKHIPYEGDDRIVERVFRLK >gi|148337400|gb|DS264459.1| GENE 273 294416 - 295660 1704 414 aa, chain + ## HITS:1 COG:L93420 KEGG:ns NR:ns ## COG: L93420 COG3919 # Protein_GI_number: 15674209 # Func_class: R General function prediction only # Function: Predicted ATP-grasp enzyme # Organism: Lactococcus lactis # 4 409 7 408 408 414 52.0 1e-115 MTRFQPILLGSDINVYGMARAFHEEYGIVSEAYAYFQLSPTKFSRIVNVHIVDDFNNFVT FRNFMLKLGKRMKAEDPERVLLLIPCGDVYANLLSQCGDDLREYFVYNTLDVNLSRRLAY KSTFYQICEQYDLPHPKTRTVTADEVKAGAYRDLPFSYPVAMKPANSVEWLNIDFEGRRK AYIFNDPAELETIIKRAYDAGYTSEMVIQDFIPGDDSRMRVLNAYVDQHHRVRMMFLGHP LLEDPSPVAAGNYAAILPDYNEGVFRRIKAFLEDIKYEGVANFDMKYDERDGEYKLFEIN LRQGRSSYFVTLNGFNLAKYFVDDLVEDTPFDGNTLFGRGSKLWLEIPKSIFLDYVAEGT DKETGKLMLKSGDWGTTLEYSKDMNPLRWLMIRHMFSIYKKSYAKYFTKKGELK >gi|148337400|gb|DS264459.1| GENE 274 295690 - 296382 858 230 aa, chain + ## HITS:1 COG:L92665 KEGG:ns NR:ns ## COG: L92665 COG1794 # Protein_GI_number: 15674208 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Lactococcus lactis # 1 223 11 229 240 202 48.0 3e-52 MGTLATESYIRLVNRATHAHCDQDYLDYIVFNDSSVPDRTAYILGESDENPFPVLADDIE KATTMGASFIVLTCNTAHYFYDDFQALTTVPILHMPRGAVARMAQRYPKNRFPRVGFLGT VGSRKSGVYKRAVEEAGYTFVEPTDELQARITSLIYDDVKGSGELNLERYESVLRDMLDP AGPCACDTLILGCTELSVLNEAFPLPQLPVIDAQAVLVEDTVARAEALRA >gi|148337400|gb|DS264459.1| GENE 275 296541 - 298175 1762 544 aa, chain - ## HITS:1 COG:Cgl2324 KEGG:ns NR:ns ## COG: Cgl2324 COG0285 # Protein_GI_number: 19553574 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Corynebacterium glutamicum # 34 456 73 502 507 293 42.0 6e-79 MSFEHPNRNNESMIDVERDIMSRPSERNTTNLDLQRMKMILDIMGHPEQSFRVIHITGTN GKGSTARMAEAICRAYGMRTGLYTSPHLEHVNERIAIDGQQLSDDDFVDTWDQVKDLVAI VDMKMDELGKPKMSFFEVLTAMAIWKFADAPVDVAIVEVGMGGRWDATNVLDADAAIIGP VDMDHMAWLGDTVEEIATEKVGIIKPNCTAIIGRQPHEDEVMPIIEAAAKENHASLVRDG VESEVVTRVPAVGGQVATLRTPNGTYTEVPIAKFGEHQAHNALAALCAAEVVIPVNGALD GDLVAEALSSVRIPGRIEQIRTSPTIILDGGHNVNAAESLRAAIEENYDFQQLVGVVAMM GDKQVEEYLGVLEPLLSHVIVTENSWRDRVMPAEDLKKIADRVFGPERVTCIPELPDAIQ EAVNMVDADDELGVGYGHGVLVCGSFTTAGDARLMLEEKINPDLKKPKAERVFQEAVDPE PRKKQDEADVDFESDANPDFNINDFGSVGPDDSVLADADADEMDEAADANEPADAETASE NETK >gi|148337400|gb|DS264459.1| GENE 276 298322 - 299923 2023 533 aa, chain + ## HITS:1 COG:PA5224 KEGG:ns NR:ns ## COG: PA5224 COG0006 # Protein_GI_number: 15600417 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Pseudomonas aeruginosa # 61 530 4 443 444 189 31.0 1e-47 MGEVITDKDKEYEKMEREAAPGPDQAMSDRVNNRSLRPRSEAFKEFMTTGWDDNEPQIEP LESSKYTPARLEALGKAFPGERIVIPAGQPKVRNNDCDYAFRPDTTFSYYTGLGEDFEAG AVLVLNPVDPDSPEAKAGKTHVPELFVAPRANHYTQDFFMNAHYGEYWVGPRAGVKEMTA MTGIETNDIAQLPDALSKDVGTEAGAVRVRVIREADPAITSMVEEIREANGFADPDNNTA ADDKLHEFAAEARMCKDEYEVREMRKAVAATKHGFDNILRKIPSSLGKPRSERMLEGAFN AISREEGNEVGYDTIIASGAHAPILHWMRNTGTVESGELLLIDAGVEVNSLYTADITRTF PTNGKFTDFQKKLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAERLHDWGILPVDVE ESLSLEGQQHRRWLACGVAHHLGLDVHDCAQARYESYQNAKIRPGMIFTIEPGLYFREDD LLIPPEYRGIGIRIEDDVLMTEDGPEWISAGIPKQIDDVEAWMADMAAEGVKA >gi|148337400|gb|DS264459.1| GENE 277 299933 - 300454 623 173 aa, chain + ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 136 1 143 178 103 44.0 1e-22 MPTPEFVLSLREKIGHDLLWLMGVSGYVEDEQGRVLLGRRSDTGEWAMVYGINEPGEEPA DTVAREVKEETGVDVVVTDLVSVKSSRKVLTYANGDNTMYMDHLFICRPDPNGNTEPFVG DEESLNVGWFSPDALPEPLAATTVERMAYVREYLKAKANGDSHAQFAFNGTIR >gi|148337400|gb|DS264459.1| GENE 278 300542 - 302254 2289 570 aa, chain - ## HITS:1 COG:AGl318 KEGG:ns NR:ns ## COG: AGl318 COG1123 # Protein_GI_number: 15890270 # Func_class: R General function prediction only # Function: ATPase components of various ABC-type transport systems, contain duplicated ATPase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 12 559 48 607 642 442 43.0 1e-123 MSEIKEGNLAEIKDLSVSFMTDAGSIKAIDKISFEIPRKKVIGVVGESGSGKSVTARSLI KLLPETATTSGAVYLSNRAGTEELEVLSLSGEQLREMRGAEAAMVFQEPNSVLNPVYTIG WQIEEGLRAHGMKDKKELRAKSIDILKKVGIPDAETRIDYYPHQFSGGQKQRIVIAMALV LNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADEVVVMYR GHVVEQGSVEQIFYSPKDDYTKRLLAAVPRIGQKLVVKDADGKVIEREKDWRDQPIAVEA KGLTITYPGHLMQPDFKAVDGIDFTIHRSEVLGLVGESGSGKSTTGRAIAGLQKVSGGSL NVLGIEMNGVKERDFKPKRADIGFVFQDPGSSFNPLMTIAENVAEPLIVHKKFSSVSDAR KYVGDLLEMVQLPRAYMNRFPHELSGGQRQRASLARALALKPSLLIADEPTSALDVSVQA KVLELFKKLQAEIGFACLFITHDLAVVDMLADRIMVMHKGQIVEHGDADQIMQNPQNPYT QKLLASLPVPDPREQRKHREHLHELLAAQQ >gi|148337400|gb|DS264459.1| GENE 279 302259 - 303434 1733 391 aa, chain - ## HITS:1 COG:AF1769 KEGG:ns NR:ns ## COG: AF1769 COG1173 # Protein_GI_number: 11499358 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Archaeoglobus fulgidus # 48 322 23 283 286 209 44.0 7e-54 MTAASANKVTVPGDNRLDELKLGNKTPFWHKIPIIKELRVAVGWQKGMLITGLVLTAFFL LVAIFAPLIAPYSYAQLKGADGVSFPAQAAPSSEHIWGTTAGGYDVFSRVVWGARTAVIA IVVAVLLSIFAGVLLGLVSGYFGGWVDRVLVMIADAVYSFPSLLLAILMAIMISHGQSGL WSGIFASGISITVVYIPQYFRTIRAEVIRIKESAYVESARVVGASTWRIMTKHLFKNSTR TLPVILTLNSSEAILTLAGLGFLGFGIEPTAAAEWGYDLNRAVSDVTAGIWWTAVFPGLA IVLIVLGITLVGESLNDLADPRLRARKSAGEVVGSIEDTSVDPSQEPGKRNEVVAELEAA KNPMGASDKPVTVTDRDPSFVASEWASEEGE >gi|148337400|gb|DS264459.1| GENE 280 303436 - 304509 262 357 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 84 353 43 310 320 105 28 3e-21 MTQSATEAQPKAKKNKLSSGFFRFVLTRFLLIIPTVFILVTIVFFVMRATGDPISAALGG RLTPEELQKRIHAAGYDRPLIVQYIDYLGGLLHGDLGTTLTDNQKVSTILTHYGAATFEL AFLALIVALIVGIGLGRIAARKRDHAADAGIRTFAILCYATPVFFLGLILKLIFAIWLNV LPASGRSSLGSEMQFSRLVSPTGFYIIDAIQLGDMSVLLDVLRHAVLPALALGLLTAGVF IRLVRTNVIATYNSGYVEAARSRGVSEKRLLNKHAWKPALIPIITVMGMQIALMLAGAVL TETTFEWKGLGFMLSQYLKARDFVAVQGIVILIAIIVAVVNFIVDVIAALVDPRVRY >gi|148337400|gb|DS264459.1| GENE 281 304601 - 306226 2642 541 aa, chain - ## HITS:1 COG:PAE2391 KEGG:ns NR:ns ## COG: PAE2391 COG0747 # Protein_GI_number: 18313310 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrobaculum aerophilum # 35 538 49 527 530 275 34.0 1e-73 MNRKKVIAALASVAALASLAACGGVKDGGAATGNTITVGTTDKITSLDPAGSYDNGSYAV QIQVFPFLYAQNYNTSELSPDIAADDGTWSADGTEFTVKLKKGLKFANGHDLTASDVKFS FDRIKKINDENGPSSLLANIESVEAKDDTTVVFHSAVKDDVTLKQVLSSPAGPIVDEESF SADKLTDANTIVKDNAFAGPYKLTSYKVNEALAYAKNDSYKGLTPAKNDVVQVKYFADSS NLKMAVQQGQVDVAYRSMTPTDVEDLSKDNKVKVVKGPGGEERFLAFNFKIMPYGEKSSE PNADKAKAVRQAVASLIDRNELATKVYKSTYTPLYSFIPDGLSGHDDTLKEAYGDGSGKP DAAKAKKTLEAAGVKTPVDLKLQYNPDHYGQSSADEYAAIKAQLEEGGLFKVDLQSTEWT QFNKDRVVTEDSDGSYPVYQLGWFPDYSDPDNYLSPFFRDGNFVNNGYSNKEVNDLIVKQ AGETDAKAREDLLKEIQKLETDDLSTIPLLQGAQVAVTGSNVKGVVLDASFRFRYSSVTK A >gi|148337400|gb|DS264459.1| GENE 282 306618 - 307820 313 400 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 86 385 7 313 323 125 28 4e-27 MSRYSAQQSSISENNRSRILQYLYHNGICSRAQIAKAIKLTPAAITKITAKLLAQGIIDE TGDMDGGKNRRSIGLNLNCAKYHIIGVKFARSLVQIAVFDLKCNRIFLSDLPTVSEEHIP KTVERIRDTVRQLIKDDPSIVAVGMAVPGPYLKDEGRTALVSSMQGWRQINFIDEFSNAF SVPVFVEQDARAGALAQFLFNPELSEGSLAYYLLGEGIGLGVIDNGTIYYGEHGTATEIG HVSIDVNGKPCDCGNVGCLERYCSANAIHEQLNANPSIVPGCETMTHAQACAALFAKANA GDETATLLMLDVARYVGYGAVTIINAFNPTHIVLGDIIAQAGQPLLDEVTQVVRERTIPE IGRNTRITLSALPTDATVTGAAAVAITNFLEHPSMFFDVA >gi|148337400|gb|DS264459.1| GENE 283 307851 - 308750 1381 299 aa, chain + ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 3 288 24 317 326 167 36.0 2e-41 MSKPIVIALGEILWDMLPTGKRAGGAPVNFAYHASQNGAESYAISAVGNDELGAELLNDA HKAGINTLVQTNEYPTGTVAVALTNGIPEYTIVQNVAWDHIGYTDELAEAVSKADAICFG TLGLRSQESHDTIIKLLQHAKEGALKFFDINLRANFYSKELIEELLGYANIFKINDDELI MMREMFSIPEGNDEEACKWFMDRFDLEYTILTGGATFSTIIAKDGETSTLLTPHVEVADT VGAGDSFSGSFTGKILSGASLKEAHRAAVNTAAYVCTKEGGWPAYPTEGVPDYLAAAAK >gi|148337400|gb|DS264459.1| GENE 284 309627 - 310031 476 134 aa, chain + ## HITS:1 COG:FN1138 KEGG:ns NR:ns ## COG: FN1138 COG3576 # Protein_GI_number: 19704473 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Fusobacterium nucleatum # 1 131 4 142 143 84 35.0 4e-17 MAKLTEEMKDFISSNLAWVATIGKDGHVDLGPKMSTFVIDDTHIGYHERTAGQMYRNLLD GSELVIAVANLEQKRGYRFRGNVTLHSDDAIYDEQVAVAEHNGTKKPMTIPVLEITEIQD LTPGATAGKTIVKD >gi|148337400|gb|DS264459.1| GENE 285 310197 - 311186 204 329 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 [marine actinobacterium PHSC20C1] # 91 329 36 264 266 83 28 2e-14 MARRVISSGKDVQETDQSGGRRSGRSISSEHAEGRSIEGYADRSKAEGFVDARRLQSEDL VSKTLQETTGTIGIMTRPKVVDFGERLKERRQAGARAIVLRVLIGLVVAVVLGAVVWLFL FSSVFRLEPGNISVVGANEWVSESQVLDIARQQSGKSLFLVSDGAVEKQIKAIPGVTSAK SKKQLPNSLEVTIKAQKPAAMLKTSEDHMTAVDSKGRVLNSVSGVSVEGIPVIEVQNVDA SLSRRPIKEALKILSSLPESMRNSITKVTAATQDSITTELNGGDRVIVWGDSSDLKLKKA VVDKIVNDPNVIGDKHNVDVSAPLRPIIK >gi|148337400|gb|DS264459.1| GENE 286 311186 - 312751 1796 521 aa, chain - ## HITS:1 COG:CAC3225 KEGG:ns NR:ns ## COG: CAC3225 COG0773 # Protein_GI_number: 15896472 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Clostridium acetobutylicum # 33 509 14 456 458 257 35.0 4e-68 MSDNQREAGTIILDPTHASFAPEETVHDLGATHFIGIGGAGMSVLAEMLHEQGVEVDGSD REPSAKTDRLQSLGITVEFGQQAKNVEGKNTVVFSSAIKPDNPEIVAAHEAGERIVHRSD ILALLMNAKRAVTVAGAHGKTTTSSMLAHILVNAGEGELADPSYAIGGSIQGKDGAILDG GHAGKGNVLVAEADESDGSFAKYHPQIAIITNSEADHLDHYGTQDNYRAAFVDHAGHATK AVIMCGDDEGNLAVLRALDATVAGRTIVYSTRNAAELGDLNGATLVRIESESETAESGAE HFTLHIPGGLIGEEERRIAVTLTVPGIHNARNASAAIIAAALLGMDVERASAAVTSFLGA ARRFQVRGTVSQVTVVDDYAHHPTEIAALLDAARRRYPQSKIRVIFQPHLFSRTRFFSSE FAQALAKADDVIVTGIFPAREKQEDFPDVTPATIVDEALKLEHEPAKDWVRGVEDMHTAA QMMVMRAHHGDVIFTVGAGDITQMDEVILHALEAHRWDCEG >gi|148337400|gb|DS264459.1| GENE 287 312841 - 314022 1189 393 aa, chain - ## HITS:1 COG:ML0914 KEGG:ns NR:ns ## COG: ML0914 COG0707 # Protein_GI_number: 15827434 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Mycobacterium leprae # 7 387 31 390 407 241 44.0 2e-63 MSNQKHIVLAGGGTAGHVNPLLAVAHVIRELEPEADIAVVGTAVGLERDLVPQAGFELET IEKVPFPRRPNKAALQFPAKWKAEKAKVRDILTRHQAQVVVGFGGYTSAPVYAAAHSMGI PIAIHEQNARAGMANKLGARWASMIGAAYAQPGLKPRRGVEVERVGLPLRPAIARLASDL EHDRTATRKAAAAQLGVDPDRPLVVVTGGSLGAVNVNRAVAASAKDLLAHAQVIHLTGKG KDDEVRSLVSVSAGEDVLGELGPDHVSDGDYRVAPYLERIDLAFACADLIICRSGAGTVS ELTALGLPAIYVPLPIGNGEQRFNAQPVVDAEGGLMVADGDFTPDWVRGHVPELLADPDK LSRYGANAWKYGIRDAAEVMAKRVLALIDQPAD >gi|148337400|gb|DS264459.1| GENE 288 314144 - 315391 1379 415 aa, chain - ## HITS:1 COG:Cgl2109 KEGG:ns NR:ns ## COG: Cgl2109 COG0772 # Protein_GI_number: 19553359 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Corynebacterium glutamicum # 11 407 6 406 550 189 33.0 1e-47 MGKPEASRSITSSASRPNMTDGAAAQTREPLKNGGTRNLANPLWCFHGFRLCVIILTIFG VIMVFSSSSVNMIANGQSPWAQALKQGMYCVFGLVIAFITMMLPASFYRKISFWFLLGAM VMQAATLTPLGVEVNGNKGWIGIPGVFTMQPAEIVKLALCIWMPNELINARKQVKKVGAP RAYSKLILGYLCAFCLVMSGKDLGTGLIILAIGGIALLLGGFPGKWLAGAALLGICGIVG FILTSPNRLGRIMAAYRTCSPSDLQGVCYQAVHGKYAIASGGLLGVGIGNSGEKWGYLPE AHNDFIFAIIGEETGFVGAAMVILLFIVMTWCMLMVAVQVRDRYITMALVCIAVWIVGQA FVNIGVVVSLLPVMGVPMPFVSAGGSSLIMCLGAAGVAISLMKEQPQVKAENRIL >gi|148337400|gb|DS264459.1| GENE 289 315378 - 316811 1754 477 aa, chain - ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 8 465 15 458 472 205 35.0 1e-52 MNMDGKTVIVAGLGVSGQSMMEVLGSRAGRVLGVDEKKPDADLHSFDQIDWDNTDMVMTS PVFNPRTPFILEAQKRNIPVMSEVELAWQLRVNSNTTGKPAQWIGITGTNGKTSTTEMTS EMLTACGLAAPAVGNIGKAVSHAAVDPANDVLCVELSSFQLHFTYSLELDCAAITNIADD HLDWHGGIENYAADKAKVFHNVKKALVYNADDERVTKLAFAAQTAPECRRIGFTLAEPKD GQIGVKDGWIVDMSGIGGGEAGKPFQVAKVTDFTHLTEPDGTVYPHLLADALTALALVLG LGADKDKALAALKQFTPGGHRIQTVAVAKTSDGGTIRFVDDSKATNAHAAKASLNSFADK SVVWIAGGLAKGSRFEQLVADQAHTIKAAIIIGKDQQPMLDAFKASAPDIPMSVIDPMDN DTVMARAIDAAGTYAQSGDVVLMAPACASMDQFKSYADRGNQFAQQAQRWVNEHGEA >gi|148337400|gb|DS264459.1| GENE 290 316894 - 317991 1258 365 aa, chain - ## HITS:1 COG:ML0911 KEGG:ns NR:ns ## COG: ML0911 COG0472 # Protein_GI_number: 15827431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 15 364 15 358 359 286 45.0 6e-77 MISLIIGIMVSLVVTIVGTPLLIKLVHKLNYGQYIRQDGPKSHLVKRGTPTLGGVVINLA VVLGWCSSALYRFLTRGEVPSWSAVLVLFAMLSMGFLGFIDDFAKVRKKQSEGLTVKGKF IGQFILATIYAVLALILPTKSGFPSAQAGMSFIEKPFFSFEFAGRVVAIVLFVIWVNFLM TAWTNAINLTDGLDGLAAGSSMIAFIGYAIIAFWEFYHLKGSDHPGFTYAVSDPLDLTII AACAAVACFGFLWYNSNPASIFMGDTGSLALGGLFAAMSIATHTEFLAIILGGLFVIETM SDIIQVGYFKMTHKRVFKMAPIHHHFELKGWPEVKVVVRFWMIEMLFVLIALVLFYGDWV ARSGL >gi|148337400|gb|DS264459.1| GENE 291 318041 - 319525 1535 494 aa, chain - ## HITS:1 COG:Cgl2112 KEGG:ns NR:ns ## COG: Cgl2112 COG0770 # Protein_GI_number: 19553362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Corynebacterium glutamicum # 6 425 1 434 514 241 41.0 3e-63 MSSPTMMPMSLTEIAQAVDGRLMPTTVPTDEPVAISAFTDSRQIVPGSVFVAIAGERVDG HDFVPKVGAQGAVAALVDHEIAGAQVPQIVVENTVKALGALAKHNIERRRALESPFTVIG ITGSVGKTTTKDLLKSLLSKMGDTVAPVGSFNNEIGLPLTSLKVNAGTRFLVVEMGANHV GEIANLTSLVPPDIAVVLKVGVAHLGEFGSAERIAQAKSEIVRGLVPGGLTILNANDEHV AAMSAIAPADVLWFGLPQKEDAQLDTTALDVRCDDLDHPSFVLEDKTGRHANVTLGICGQ HNVMNALAAATVAMTLGMPIDAVASGLSDVTSISPHRMAVSTVTKPETSFTLIDDSFNAN PDSMKAGLDGLSRWHAGAEQQPFRIAVLGAMLELGPDEHRLHEDVGRYAVEGGADALVTV GSTSDEALDALAEAMAQGGKAVAADPTMVQWAHDAEQADRMVTRLATDHEGTVVLLKGSH ASGLSALAERWTQN >gi|148337400|gb|DS264459.1| GENE 292 319586 - 320431 890 281 aa, chain - ## HITS:1 COG:no KEGG:BAD_1106 NR:ns ## KEGG: BAD_1106 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 281 5 285 285 492 100.0 1e-138 MTLGLLASRYGFDLDPTSAAEVTITSIADDVESVRPGALFVPSADVDVHQLSQAQEQGAY GAIVPHALRGQTDDIQIPLIYAEPTMGQLGKLVSDMAGNPSDALAVFAITGKNREIVESE VRNLADFLHMLGNPVGVISSSDSQSLERFLNLEYPLSAIDVQRTMAVCAEDGAAAVILAL DEETLREDALQSVSVDVLACDDNGLSDAEVAKLVAKFGCAVGKQTRIAGRTQESDLLAAQ AATAYGQTDSRSLSLSIAMVLAAGVRKANIKSALRVSRDLN >gi|148337400|gb|DS264459.1| GENE 293 320499 - 322301 1960 600 aa, chain - ## HITS:1 COG:ML0908 KEGG:ns NR:ns ## COG: ML0908 COG0768 # Protein_GI_number: 15827428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 24 589 90 663 675 265 33.0 2e-70 MNPIRRIYTFFHKNLLTKTMAIGVVLALMGTTCLIQLANIQLVNGKGMAQAAAQSRTTTV TLKARRGKIMDTNGAILAQSVERYTIIGNPEQAQAFIPTTCTKQTGSNCHQINGKPVGVT GAAAVARLLAPVLGMDATELGAKLSISGQYVVLKKDVTPAVKRKISKLNLGGIVYAELSN ERLYSNGTLMGSLLGGVDADGKGVAGIEQMENKTLTGRDGYQVYQQGNSGVEIPGTMTES KDAVNGSDVTLTIDRDVQWYTEKVLSDSENKYHSAWGIAMVQDVQSGDILALADSDTTEA GSDQAKMGASRAVSETFEPGSIGKVLAMSGMLQLGLHKVDDKFTVPNTVTVEGQTYKDAV DHGNEHWTLAGILEQSSNVGMVIAGDKMTNEQRYNFISKFGIGQATGLNLPGESEGVLHP SDSWDRRTRNTVLFGQGYTVNVMQLTNAVSVIANKGVKKPQRIIKSITDTAGHVEEQQSK GEATRVIDESVASQMLNAMESSAEHYNTFVKVDGYRMAAKSGTAEVAGANGQLTSIISDY STIIPADNPRFVITVVLKDPQGIFGGLTAGPVTAEIGEFLMQKYEVPASSPRTDAIPVNW >gi|148337400|gb|DS264459.1| GENE 294 322298 - 322759 536 153 aa, chain - ## HITS:1 COG:no KEGG:BAD_1108 NR:ns ## KEGG: BAD_1108 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 153 1 153 153 284 100.0 8e-76 MAAPRTIASNAAPAGRKSQTETIGTTRPELHVIKGTRVEGNGIRHGFEQLITWTRTRSTP LLHLVIAAVFLGVCLLGSLMLRTQMVQNSFEASQIETHITQLTQDVEDDQAKLDELDASL PSKAEEMGMVPQKGALTIDLNGYQANASGDKTR >gi|148337400|gb|DS264459.1| GENE 295 322761 - 323792 825 343 aa, chain - ## HITS:1 COG:ML0906 KEGG:ns NR:ns ## COG: ML0906 COG0275 # Protein_GI_number: 15827426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Mycobacterium leprae # 8 317 42 358 372 254 47.0 1e-67 MTDVTTIHQPVLLRDCVDLVAPALAKPGSIAVDCTLGLAGHSTAFLKASPNARLIGIDRD TEALALATKRMEMDGLADRFTPVHAAFDDFSQVLSDQGVDKVNAVFMDLGLSSLQIDETE RGFSYSHDAPLDMRMDVTQPLTAEQVLAEYSFADLVRIFRTYGEERFSKQIAREIVRRRE TEPLTTSGQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLAGTLPQIANHLAV GGRLVVESYHSLEDKTVKAFMNQGLKVDAPADMPVVPPDMMPFFKELTRGAIKADAEEIA NNPRSASVRLRAVELTRPIPARWRKRFDQGADYASMTRQGRRD >gi|148337400|gb|DS264459.1| GENE 296 323792 - 324307 465 171 aa, chain - ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 28 166 1 139 143 138 41.0 5e-33 MVHDIGTESVSDDDPAQSGGMMADLPPLLLGTYTPKIDAKGRMALPAKFRSQLGSGMVMA RGQERCVYLLPQSEFRRIAVQIQRTSMGNKAARDYLRVFLSGAVDQEPDKQGRVLVPQML RDYANLDSDIVVIGVGTRAEIWNRQAWEDYLADKEQGYSDIADDVLPAMEF >gi|148337400|gb|DS264459.1| GENE 297 324568 - 326847 2367 759 aa, chain + ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 2 748 15 753 755 337 33.0 5e-92 MSSYSAQLREEQQAVSRAYDRLDALRAQARSRLDTVRAAGSHGSPTQRTERDSFATMYED RLTQLRAVEDRLVFGRLDDVHGAHRYIGRIGLSDEDHEPILTDWRADAARPFYEATPSNH GDIVMRRHITLSFREVVGVEDEVLDVHSDQVGEASSNGTLTGEGALLASLNAKRTGKMTD IVATIQGEQDRIIRADLNQAVVVQGGPGTGKTAVALHRAAYLLYTHRRALQRSGVLVVGP SSTFLHYIDQVLPSLGETGVVSRTIADLIPGIIATAHDDPYAAKLKGERRMAKAIANAVA ARERVPSHLPVIRINGFNVPMVRADIEQAIADAKRTRQPHNKARETFVRDMLSAMRNRYV ERLDYEPEQAELNDVMQQLRMNDDLRKTLNLAWLPMTGEWLVDQLFAKPQQLRRFAPWLE ERDIKTLTRPKGSPFTVSDVPLLDEAMELLGPDPKAVARQKALDAKRAEEEQFAKDTLAQ AGIGSGIVTSQMLVDNINGMDAELTAQRAAADREWTYGHIVVDEAQELTAMDWRMLIRRC PSRSFTIVGDVAQTSALGGTRSWRRMMDPLFGERNWQLNELTINYRNPKEVSQLASDFAS SEGLYISTVNAVRGVPDSVKRLTLRDDSLIGDAVAQQTVELVRAYVSSDGTGRVAIIAPD DMLKPLRARVYAQLQDELDPKEFDRLDAQSSWDEQVTVCSTQTVKGLEYDAVMVVQPGRI EENAPSRIVAASDLYVAMTRPTQRLLILRTKDDEKLLKL >gi|148337400|gb|DS264459.1| GENE 298 326858 - 328057 1760 399 aa, chain + ## HITS:1 COG:VC2481 KEGG:ns NR:ns ## COG: VC2481 COG0111 # Protein_GI_number: 15642477 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Vibrio cholerae # 3 398 12 408 409 392 52.0 1e-109 MPKALLLENIHPDAAQSLRDHGFEVECLKGALSEDELIDALEGVDLLGIRSKTSVTRKVI DARPTLTAVGCFCIGTNQVDLEYAGKNGIAVFNAPYSNTRSVVELVIGDIICLMRRIPAH THHMKHGMWDKSASGSHEVRGKTLGIIGYGNIGSQLSVVAEALGMRVLFYDIEEKLAMGN AHRCDTLNELLEQSDVVTLHVDGRKSNTGFFGEDQFEHMKQDAIFINLSRGFVADLDALK KHLDSGHLSGAAVDVFPIEPKKTGDEFLTDLADEDNMILTPHIGGSTLEAQKSIGQFVSQ RLEDYWFKGSTMLSVNLPQITLSDIKSNFRIAHLHANLPGVLARVNRVLGEDGINIAAQA LGTEGEIGYVVTDVAQRPDQRALDQLASIEGTIRMRVIS >gi|148337400|gb|DS264459.1| GENE 299 328174 - 328713 416 179 aa, chain - ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 30 175 1 146 154 176 56.0 2e-44 MRGSASLFPMRRRGRQAWLISKAQSILDNMHCPFCQNPDTKVVDTRISDDGHSIRRRREC PKCSKRFTTLETTMLLVVKRSGNVEQFDRNKVISGVRKACQGRPINEDDLKMLGQKVEED LRSRGLAQVKSDEVGKAILKPLRDLDMVAYMRFASVYQNFENLEDFQRAIDELKGASSE >gi|148337400|gb|DS264459.1| GENE 300 328676 - 328978 195 100 aa, chain - ## HITS:1 COG:no KEGG:BAD_1114 NR:ns ## KEGG: BAD_1114 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 100 2 101 101 182 98.0 3e-45 MNGAANIGNVANRIAMAIMAAGLAWCLFGFIAPGSAQSAPDSTAVVVYTVQPGDTLWRYA ASITPEGGNVGDTVDELMRLNNLDTVSLHAGQRLIVPHEA >gi|148337400|gb|DS264459.1| GENE 301 329129 - 329842 863 237 aa, chain + ## HITS:1 COG:MT2793 KEGG:ns NR:ns ## COG: MT2793 COG1974 # Protein_GI_number: 15842258 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium tuberculosis CDC1551 # 17 237 5 217 217 221 51.0 8e-58 MSTIPFTPKKSDERPDESTLTDRQRKVLDAIKTHLAKQGFAPSFREIGEAAGLKSPSSVK HQLQVLDEKGFIRMNANKGRAIEVVNLNDEEPNGKVAQVIPFPSQDDACGSIMASHDVPL VGRIAAGVPITAEQHVDDVMRLPERLTGTGNLFMLEVHGDSMIDAAICDGDFVVVREQNS AENGDIVAALLDDEATVKTFRKDHGHVWLIPHNPAYSPIDGTHAEIMGKVVTVLRKI >gi|148337400|gb|DS264459.1| GENE 302 330022 - 330963 1187 313 aa, chain - ## HITS:1 COG:XF0866 KEGG:ns NR:ns ## COG: XF0866 COG1230 # Protein_GI_number: 15837468 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Xylella fastidiosa 9a5c # 1 307 17 315 321 171 40.0 1e-42 MAHSHAGVDATTAASGAEHQKRLMMSLGLTSTVFIAEVVSAIVTGSLALLVDAGHMLTDM SVLIASTVTAVLMQRKPSNKRTWGWARLEVLTAAVGALVLLIVGIYALVEAGMRLFGGAA DEVHDVRLLLFMGILGLAANVGSIFILAGQSEDNMNMKAAFLEVMNDALGSVAVIVSAIV LISTGWAGFDAVAGGIIALMMIPRAFVLLRNAVRVLLEETPQELDLDEVREHLEQVPHVV AVHDLHASTVSTGMPVVMAHVVVERGLTMDDAADILSQLQNCLREHFPVSVPHTTFQLEP EGYDSDSRKELHS >gi|148337400|gb|DS264459.1| GENE 303 331139 - 332101 1381 320 aa, chain - ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 314 3 308 313 268 43.0 8e-72 MVDSPIKPTKLAIIGAGAVGSTLAFAAAQRGVAREIVLEDIAKERVEAEVLDMQHGSSFY PTVTIDGSDDPEICRDADMIVITAGPRQKPGQSRLELVGATINILKAIIPGLVKVAPNAI YMLITNPVDIATHVAQKISGLPANQVFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGE HGDSEVPLWASATIGGVPMCDWTPLPGHDPLDAEVREQIHQEVKNAAYKIINGKGATNYA IGMSGVDIIEAVMRDSNRILPVSSMLHDFHGISDVCMSVPTLLNRSGVNTAINTPVSDRE LAALKRSAETLKETAAQFGF >gi|148337400|gb|DS264459.1| GENE 304 332363 - 333823 599 486 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 112 468 56 410 425 235 39 3e-60 MTAGDVGGVLADQSDVLLDTDGGEHLRETHDEQWQERESRNALKHVAGLGEIQDVTEVEY RKVRLERVVLVGVWSSRETTQAAAEESLRELAALAETAGAVVCDGLLQHRIKPDAATYVG SGKARELAGIVAQDEADTIVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSRE GKAQVELAQLEYMLPRLRGWGGSLSRQAGGRAAGDAGIGSRGPGETKIEMDRRVIRSRIA KLRRQIAQMAPARDVKRGARRRFGLPTVAVVGYTNAGKSSLTNRLTGSAELVENALFATL DTAVRRAKAKDGRLYAYVDTVGFVRRLPTQLIEAFKSTLEEVADADLIVHVVDGSHPDPF SQIDAVNDVLSDIDGVETIPTIVAFNKADRMDEAARERIEALMPEAHIVSAFSGEGVDAL REHVESMLPTPNVHVEALLPYTAGSLMSRVREYGKVINVEYRDDGMMLEAEVDDQLAAQI VEQAID >gi|148337400|gb|DS264459.1| GENE 305 333986 - 334597 613 203 aa, chain + ## HITS:1 COG:BS_ybxB KEGG:ns NR:ns ## COG: BS_ybxB COG2813 # Protein_GI_number: 16077174 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Bacillus subtilis # 4 199 2 197 201 124 35.0 1e-28 MAQAEQYFAAEPQSKDVRRKLHVTLRGNEADVEVSNGVFSGNRVDLGTSVLLRQAPEPPE EGTFLDLGCGWGPIALTLGFESPKADIWALDVNERALELTRRNAELNGMGNIHAVTAEQV PAVLTFDLIWSNPPIRVGKEALHELLMTWLPRLNAGGAAYLVVQRNLGSDSLIPWLATQL GDGFEVGKYASSKGFRVIEVVRA >gi|148337400|gb|DS264459.1| GENE 306 334594 - 338703 4385 1369 aa, chain + ## HITS:1 COG:STM1641 KEGG:ns NR:ns ## COG: STM1641 COG1643 # Protein_GI_number: 16764985 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Salmonella typhimurium LT2 # 5 1368 73 1295 1300 832 38.0 0 MRFEYPSELPVSAARDEIAEAVKSSQVVIVSGQTGSGKTTQLPKILLELGRGSHGRQIVH TQPRRLAARTVAERIASEMDVKLGEEVGYQVRFTDESSPKTRLRVVTDGILLAQIQRDPK LMQYDTIVIDEAHERSLNIDFLLGYLTALLPKRRDLKLVITSATIDSVKFQEHFEHALHT KVPVIEVSGRTYPVQIVYEPLGTAPALMRSVPGFETGAMPGDADYESLSAAPDGRDGRDS RDTNVDMPTAVARACAELVIHSSHDRGPRDILVFASGERDIHEFENALRRHYGPRAADMR RPDAIEIVPLFARLSSKEQHKVFEPHEHQRIVIATNVAETSLTVPGIRYVVDPGTARISR YSKTAKVQRLPIEPISQASANQRSGRCGRIADGIAIRLYSREDFETRPEFTEPEILRTSL GAVVLHMLSVGVARTARDVTDFGFIDPPDMKAVSDGFNELTELKAIARKHGEVVLTHTGR MLARIPIDVRLGRMVIEAAKSTTPNTLAAVLVVVAFLSLQDPRERPDENREEADRIHNRY ADPTSDFLTALNLWDRVFQADGEPSNSALRRICKTEYLSWLRMRQWKDLVAQLREMCQEF KFKLGEPIPVSRPPLEIRQLPLNQQAAHSLCCSWDAQGIHTSMLSGLLSMMGMQVTREPK ASDFAGLKGAARARAMKRAQKMAKNDYQGARGTHFALFPASAVAKSTPQWVMSTELVETS RLWARYSAQIDPAWAEPLAGALTRTTYADPHWSGSRGSAVASAKVLLYGLPIVQDRTVQW GRINPLEARDFLIRQGLVEGDIQQRFSYDDFVMRNRDILEDAADDASRTRQVAQTVGDED LFDFYNAIIPNTVTSVADLAKWWKTKHDEQPDLLDFDPDKVERLAGSDSVSLDDYPDHWH TLGTDGSPIDLRLSYIYDPHDPNDGVTVHVPLKALSRLTPEQFSWNVPGLLDELIVGMIK SLPKTLRVQFVPAPDTARKIRTWIDERYPDLPGSGSQQKPNIAPENEDGMAAWPDLPHVF TQAAISIVGAQIHPEVLTGELWNKLAPYLRMTFAVEQQLPPNRKNQHGRRHARGPVKTLG TGKSLVELQRRFAEQAKASARHMVEKQARNAGNQGKIVEQANLLNKAGATTEARATMLWQ GALDTLRLPGERISSRWLGTEALMLASAPYKSTKELTEDLQLAAVKRLLPNIDQLPDDEA LADAVLDVREVYEDTVYAVAHDVIAILKRYAEVDKAVSSKADLPLLSVLQSIREHIATLV YPGFIGKTPPDALPSIERYLHADLLRLTKAKNDKNRDVRWAWEADEAKQLADNTMAKAQR EPAGPRHETLMKQAETVRWMLEEFYVSLWAQELGTPKPISLQRIKKAIA >gi|148337400|gb|DS264459.1| GENE 307 338749 - 339825 926 358 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0726 NR:ns ## KEGG: BBIF_0726 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 358 1 360 360 413 62.0 1e-114 MRLGSVLSEALRNIGSGVSRAFAMFLAVLLSGTLLGGYEAMTVIDLESQAVQRINAYADV NAIVGGTVDGTACDRLSDAGDGMTGTLAGAMRAGKQVVPLATPGKDISSYDVTPGMIRLI AGNAKADVSGVWVPRDVAKDFGLAVGSALQTREGTTRVAGVFDWPNDGRDTRFAYAFIVP VSASASTFDECWVKQWPVDGQTENLLYATLVAGSGSSNAGVTQVNKGFDAHYDARASYVN RSTRWMPWVGLAIGVLVGVFGVRRRRLEYAGALHSGQSKGAQLLGIGVETGVWAGLATFA SCALLLAYAVRMSRSDWAAVLAAAVRTPLAVFAGVMVASLFAGLLIRESQLFRFFKKR >gi|148337400|gb|DS264459.1| GENE 308 339907 - 340998 985 363 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0724 NR:ns ## KEGG: BBIF_0724 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 4 363 12 366 366 330 55.0 9e-89 MGKKQRGTKVMNNGARRGRLAWAWSLLAVATAICVSVGACALLLPDRAPALLGSAGETTT APASVQEYSGSQQVTVVPTISTERNLLGNANGTVTADWSADGLASGKGAYKVNDRVVVAL NTATPLYRDLKTGDKGDDVLALNNELSRLGYNSVAGSDTYWWATSDGWRQLMNDNGNPSD GTLALADTMWIPENAVAVDEWTATTGSMVTGGTAIGKIPGALTKLTVKNGAAVGQDRTIG MYGVNGILPADNTEITDAEFLRNVSASETFQSMDMQTKKAGLDATVALKEPLQVLRVPAG AVFGIDGSSGCIVPKSRNTSNTPAKVTIVGSELGVSLVQVQDADASAIANVEIGSGLNGL VCK >gi|148337400|gb|DS264459.1| GENE 309 341021 - 341680 204 219 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 9 204 2 214 245 83 28 2e-14 MREGAHMRVVVEGLAHRFPGTDLLFEHLDFVAEPGSTIAVCGPSGCGKSTLLSILAGWEK PYAGTVTREGVNRVGWVFQNPYGVAERTALDHVVFPLLAKGMRRKEAELKALEAMGLFDL EYAADRRFSDLSGGEAQRLMLARAVCSKPDMLLVDEPTAQLDTRTAHSVSHVLNNLSGQG MIVLVATHDPDTRDACDRVLDLADYAPGGSKSQEPELEE >gi|148337400|gb|DS264459.1| GENE 310 341685 - 342377 616 230 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0288 NR:ns ## KEGG: BBIF_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 5 192 20 204 242 120 38.0 4e-26 MRGKAIAVICCLALLVGCTGCGALKEGLRRERQSQQGQSSQQGERIASSLKDYARSLLDS DGGKISDQQKSALEKAASGGKVSQADYERAWADYKQCIIDKGYAEPTFDKYDNGIYALPS YNTDGASKEAIRKLNDDLTSCSMLHVTDINTVYRLQLGNPKLLLNDKEVAADCLRKEGIK PKDYIADKLEKDLESGESAGLRDNRKALTCLVTAGVNVTASDETVWYPLK >gi|148337400|gb|DS264459.1| GENE 311 342581 - 342724 126 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488919|ref|ZP_02029768.1| ## NR: gi|154488919|ref|ZP_02029768.1| hypothetical protein BIFADO_02228 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02228 [Bifidobacterium adolescentis L2-32] # 1 47 4 50 50 89 100.0 1e-16 MGAWHSGSLPGGHGLRQFAAEIEHIGGSLSTDCENGIWMFHARIPFD >gi|148337400|gb|DS264459.1| GENE 312 342653 - 342802 66 49 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154488918|ref|ZP_02029767.1| ## NR: gi|154488918|ref|ZP_02029767.1| hypothetical protein BIFADO_02227 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02227 [Bifidobacterium adolescentis L2-32] # 1 49 1 49 49 90 100.0 3e-17 MLDFSRELSETMAAGQAAGMPGTHIIHFSDFQGIVFTRTDTSYLPPEGA >gi|148337400|gb|DS264459.1| GENE 313 342843 - 343067 234 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488921|ref|ZP_02029770.1| ## NR: gi|154488921|ref|ZP_02029770.1| hypothetical protein BIFADO_02230 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02230 [Bifidobacterium adolescentis L2-32] # 1 74 1 74 74 127 100.0 2e-28 MTEKNGAFRLSDMPRIKHPFRLAAIMTCELLMVYEAVCHPGSPMALMFTVMQIMLTGLAY FWSRARVRMPIIRM >gi|148337400|gb|DS264459.1| GENE 314 343069 - 343725 557 218 aa, chain - ## HITS:1 COG:sll1592 KEGG:ns NR:ns ## COG: sll1592 COG2197 # Protein_GI_number: 16330518 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Synechocystis # 10 214 9 221 226 64 28.0 1e-10 MTGKTVGGPKILLVDDDKIVIEALTDLFKRILPAVGIVDSATSGVEALELFASNADQYAL VLLDMSLEGMQGPEVCRRMRLMDCSTPILGMTSFSLNRYRVPLAAAGAQGLVGKGDETQL EQAVSRVLSGCFLPGFETPMAAYAKLKCDTQAESTLTNMQETIMNLCANEYLTDGEIAER LGISIATVRKHMQNIVKRLNCRTQRQAIITWLKRGNGR >gi|148337400|gb|DS264459.1| GENE 315 344260 - 345000 759 246 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0288 NR:ns ## KEGG: BBIF_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 10 235 15 241 242 111 33.0 2e-23 MRNGIVHVLRNITTCLVGITLIGCAGCGVAVDQQDTKQPTGSAGSDTSKSKIANSIPDYI DFLLDLDAKPDTKYPMSDAQKTILKRSKKSGSVSKPDYELAWSNYKQCVTGYGYTTPVLR QFSNGLYMIAMRDTTGMSDQQRKKFNEDENKCYNTEVIAVTGVYQMQIGNPGMLSDGDQA MVDCLHKAGIVPKNYDKEAYKKDLDAHAKNQPTTVDFSNAEMQSCWVANGASFGDVNDTD QWKPLG >gi|148337400|gb|DS264459.1| GENE 316 345016 - 346221 1593 401 aa, chain - ## HITS:1 COG:BS_ytbD KEGG:ns NR:ns ## COG: BS_ytbD COG2814 # Protein_GI_number: 16079956 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Bacillus subtilis # 8 395 8 393 396 167 29.0 4e-41 MAKERFFNLPVLILIASSFMLGMSEFIVVGILPDIAADLKISEVTVGNLVSLFAFVYAPV TPLGSALSARFPRFATHLTLIGIFLAGNILCAFAPNYAVLVVARIMIALVSGTLVAVAMT YAPDVTTDRFRTKFIAWVFSGFSIASVVGVPVGTWVANTFGWRWAFHMINVLTIVLIIGM VMVLPRNSHIVKIGFLPQFRLFFDRRIQLGVLDVVCGAAASYVFYTYLTPIMRDEVHVPE QYLSVGLVIFGAACLWSNLYGGKLADRGRGVEPLTHIRPIYCAHAVLMASLVVAHWVPVY GALLLVVLGMFMYLQNSASQVLYMDVASQSHPGSLNLAASLNSMSFNIGIAIGSAVGGLI NGHFGLMWLGPVGALFLVCAIAITTFLRPFVAQERDFYADI >gi|148337400|gb|DS264459.1| GENE 317 346394 - 347239 959 281 aa, chain + ## HITS:1 COG:no KEGG:BAD_1122 NR:ns ## KEGG: BAD_1122 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 281 28 308 308 491 99.0 1e-137 MWRKANPIARIGMVATATVAAIAAIAIIVGAVRFIGWRVQVNEALTAQSQSQSQYDFNPG NIISDGTFFNGNALSEQQVSTIIEQQGVACSGERCLKSMTFSTESQSADEYCQAYDGGPN ESAAAIVYKAGKACGISQKVLLTVLQKEQHLLTATNPNDFQFKAAMGLSCPDDANCDPTY AGFFKQVYGAAKRYQYYLRHEGRYGYHAGRLNYIQYNPNASCGGSNVYIENRATALLYIY TPYQPNAAALEAGAGEGDSCSSYGNRNFAIIYHSMFGSPRG >gi|148337400|gb|DS264459.1| GENE 318 347411 - 348772 1724 453 aa, chain - ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 9 450 1 444 446 558 59.0 1e-158 MRMERLDTMDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFD GSAVEGLTRVSEDDMIVKPDPSTFQILPWRGGPQGTARMFCDVLTPDGEPSLGDPRHVLK QALAKAKEKGFTFYVHPEIEFYLFEKQDDWAQTPKPIDEGGYFDHVPRSPGMDFRRATVN MLEQMGISVEYSHHEAGPGQNEIDLRYADALTTADNIMTFRTVVKEISLERGIHASFMPK PLADAPGSGMHTHLSLFEGDANAFYEAGQEFNMSVTARQFAAGILYHAAEICAVTDQYVN SYKRLWGGAEAPSYICWGHNNRSALLRIPQYKPGKGNSARMEFRALDPVANPYLAYSVLL AAGLDGIDKQMQLGEPTSDDVWELTDAERQAMGIQPLPESLDEALKIMEKSDFVADVLGE HAFEYFLRNKHQEWDEYRKQVTPFELKKYLPKL >gi|148337400|gb|DS264459.1| GENE 319 348811 - 349536 1039 241 aa, chain - ## HITS:1 COG:ML1261 KEGG:ns NR:ns ## COG: ML1261 COG0106 # Protein_GI_number: 15827647 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium leprae # 1 241 2 244 245 261 57.0 6e-70 MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPLEAARTWVESGAEWIHLVDLDAAFGTG NNRDQLRAIVKELGDKVNIEMSGGVRDDASLDAALEAGAARVNIGTAALENPDWTASVIK KYGDRVAVGLDVRGHTLAARGWVKEGGDLFETMKFLDSVGCSRYVVTDVARDGMMSGPNI ELLREVASRTDAKVTASGGISKLDDLRNIKELAELGVDAAILGKSLYARAFTLEEALEVA R >gi|148337400|gb|DS264459.1| GENE 320 349648 - 350295 824 215 aa, chain - ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 3 212 4 208 211 207 50.0 1e-53 MTSVVVFDYGFGNVRSMVRALANLDLDVTLTSDHRQALEADGLVVPGVGAFGACMEGLKS VGGDRVIKDRLRAGRPVLGVCVGEQIMFERGMEHGDGTPGLGLIKGDVELLDADVVPHMG WDTVEAPEGSVLLKGVENERFYFVHSFAAMSASPADTSADQLDFGDAEEHVTWCTYGRSR FVAAYERGPLFATQFHPEKSAEAGAQLLRNWVATF >gi|148337400|gb|DS264459.1| GENE 321 350347 - 351117 929 256 aa, chain - ## HITS:1 COG:no KEGG:BAD_1126 NR:ns ## KEGG: BAD_1126 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 256 1 256 256 432 100.0 1e-120 MSDDKDDLNGFDGLGKTNDDGMHFSEEELEAAMAGFEKEFQDEEAAQQNDAPAQVPFDQP DETVNSDASSDESQDGLQSKEADAVLSEAENSLSFDDELQGLLGNRAKVAVIITRLASAR LFAAFCQLSDISAQCLASPQGAVAVLRNLDGDGPEAAIKDLTTVVSGMPAVLAINRADKL EATMYLQGKVGQTFAPPVLLTSTAPFVEDLLLGITDVQGVRDSGVETVDSASLTRDDAMK ILAEHTRFGRGSSSIE >gi|148337400|gb|DS264459.1| GENE 322 351117 - 351716 822 199 aa, chain - ## HITS:1 COG:Cgl2047 KEGG:ns NR:ns ## COG: Cgl2047 COG0131 # Protein_GI_number: 19553297 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Corynebacterium glutamicum # 3 199 6 202 202 231 58.0 1e-60 MARTATIVRETSESKVELSLNLDGTGKTDIDTSVPFYNHMMTALGKHSLIDLKIKAAGDT DIDAHHTVEDIAIVFGEALKQALGDKRGIRRFADATVPLDEALAKAVVDISGRPYCVCTG EPEGFEYCMIGGHFTGSLVRHVMESIAMHAGICLHLHVISGRDPHHIAEAEFKALARALR FAIEPDPRVDGIPSTKGAL >gi|148337400|gb|DS264459.1| GENE 323 351887 - 353062 1620 391 aa, chain - ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 13 387 9 364 366 303 44.0 3e-82 MSETSSNAIPAYLPLRNDLIGEEPYGAPQLDVPVCLNVNENPYAPEPAVVETIAQRVKEI APTLNRYPDREHIELRKAFSTYLERESGVKLSVDQLWGANGSNEIMLQLFQAFGGPGRIA LGCDPTYSMYPEYARDTFTTWKLAHRNADFTLDVDATIKAIEDVKPAMIVLTSPNNPTGT PLKPENLKRVLEAARTAEVAGAAEGVHPVVVVDEAYIEFRDPGTPTALELIGEYENLAVS RTMSKAFAFAGARVGYLAANKGIIDCVRIVRMPYHLSAVTQAAALAAFEHTDEQLSRVAH LRETRNATSAWLKEQTYKGQPLEVAETQSNFILFGGHFDDRDRIFDELLKRGVLIRVVGP EGWMRVCMGTDEEMARFREALVEVLRIVEQG >gi|148337400|gb|DS264459.1| GENE 324 353059 - 354441 1662 460 aa, chain - ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 1 444 2 437 442 446 55.0 1e-125 MRIIDLRGKKLTRAEMLEAMPRAEMGTNEATELVQPILDDVKARGAAALRDFAEKFDHIR PEHLRVPVEAMKAAVDELDPEVRAAIEESVRRCRAVSASQVPAPFHTDLAEGARVAERWI PVQRVGLYVPGGKAVYPSSVIMNVVPAQAAGVESLAIATPPSRSNSDGLPDKTILATCAI LGVDEVYAVGGAQAIAMFAYGAKGSEPQDGEILCDPVDKITGPGNIFVATAKRMVSGIVG IDAVAGPTEIAIIADKGANPSWLAADLIGQAEHDELAGSVLITDSEDIADKVQESLKYRV PRTEHAERVNTSLRGRQSGIILTDGIEQSIDAANAYAAEHLEVQTADPDAVIAKIRNAGA IFRGPYSPVPLGDYMSGSNHVLPTSGTARFAAGLGVHTFMKPVEVIEYDEQGLKTLAARV NAFAVSEDLPAHGECVLSRFIDDPYNKATIKEQEEQAGLR >gi|148337400|gb|DS264459.1| GENE 325 354652 - 358242 4544 1196 aa, chain - ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 2 1193 5 1182 1184 1165 50.0 0 MATSANFVQLHNHTHYSLLDGASKIPDLVKRAKELGMPAVGITDHGNMHGAYEMWSAAVN AGIKPIIGIEAYVTPETARQDPTRVSWDTNWNPDLDPLHRRRNPDDVSGGGVITHLTMWA ENDEGLVNLMKASTDANLEGRVMRYPRMDKEILAKYSKGIIASSGCPSGIIQTRLRLGQF DDALRAAGEFQDIFGRDNFYIEFMDHGLKIEKQVTDGLLDIAKKLNAPLLATNDSHYTRA EDAGAQDAMLCINSGSTLDEPGRFKFDGTGYYIKSAEEMRELFKDLPEACDNTLEIAERC NVMFDDHEDGAFMPQFDCPEGWDETSLFLKKVEEGLERRYNGKPSLEVLRQADYECGVIC QMQFCGYFLVVADYINWAKAHGVMVGPGRGSAAGAMVAYAMGITELDPLEHGLIFERFLN PERVSLPDIDVDFDPDGRGRVLDYVGEKYGRDKVAQCVIYGTIKTKQALKDSARIMGYDF SVGDKITKALPPAQTGGKDIPLHDIFDPSAKRYAEAREFRELYDSDPDAKRITDEAMGIE GLIRQTGVHACATIMGSEPITNTSPLLERTDGTVTTTLEYHTCETLGLVKMDFLGLSNLT VIRDTLNNIEANGKERIDHTKIPLDDRPTYDLLSRGDTLGVFQLDSDGMRSLLKTLKPNN FNDISALIALYRPGPMDMDSHTNYAKRKNGLQKITPIHPEVAEPLKEVLDETYGLIVYQE QVQSAARILAGYSLGKADVLRRAMGKKKPEVLAKEKIPFFAGMKEHGYSEEAAQAVWDIL VPFSGYAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGASTNKDKTALYLGEARRMG IQVLSPDVNESVYEYSAVGDVVRFGLGAIRNVGKNAVDAIIAERENGHGKYVNFTDFIKR VPLEALNRRLVESLIKAGAFDSIDPNRRALFTIHETAINSVVGLKRKQAEGQFDLFADLD DSKENDSAMGDAMVQVPDVEEWDKKTKLNFEREMLGLYVSDHPLSGMQSILVSLREMSIA HLIDRAGSMPDGQQVTIAGLITNVDRRVSKKGNPWAIVTVEDLESSIQCMFFGKVYEAAA PELAVDTVVQIRGQVEKRDETVSMRATEFTVPTLEAQDERPLTIVLPPIALDQSHVRRLG QILTSHPGPCEVKLALMDDKGNAKVLTFGDRFRVKRDTSLFAEIKILFGPSSLPLA >gi|148337400|gb|DS264459.1| GENE 326 358306 - 359235 241 309 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 79 286 83 277 285 97 32 9e-19 MSRLVPAPDALVGKRFDVAVAKMLGISRAKAADLIESGQARVLGRDISKSSTLQAGETVE FDIVEERSEPEPIAHDMAVVYEDDDVVVVDKPVGVAAHASVGWTGPTVLGSLIDRGVHIT SYGAAGRQGIVSRLDVGTSGLMLVCKSDLAYVEMRRQFAEHEVVKTYHALVQGNLKEDKA TIEAPIGRAKVSDFRFCVTPAGKEAITHWDVMERFGEATLVSVNLETGRTHQIRVHFSSI GHPLAGDAMYGANPQLSEALGLERQWLHAMQLEFRHPRTHVWTTVKSHYPADLQHALDVM RARHADQSL >gi|148337400|gb|DS264459.1| GENE 327 359232 - 359795 566 187 aa, chain - ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 6 174 31 196 202 95 34.0 6e-20 MKNDQRRLRDRVAVFACIAIATIAIDQLTKMWALSALADGRTIRVIPGLLSLTLVRNPGA SLGMGSGMTWLISLLAMAACVALVVLAVRTISMKWTVLFAFAFAGAFGNLIDRVIYAEGF LNGKVVDFLNYGWSIGNVADIFLMLAGVAAVLLLFLGEPFSQKDLDEANGKTLGDDANAT DDGAKAA >gi|148337400|gb|DS264459.1| GENE 328 359817 - 361382 2340 521 aa, chain - ## HITS:1 COG:no KEGG:BAD_1133 NR:ns ## KEGG: BAD_1133 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 521 1 532 532 563 97.0 1e-159 MALLTPKDIREHTFQTVRFKEGYDVDEVDDFLDQVTETVEALGKQAVAGGQATQSLGPDV AGLNSKISELNAQIQSLQQENATLKSASEQAAGAGDQAAQAAQAAAAKLSEAEESNRALS SQNEQLKGQIDRLSAQVDQLTAQAAEAAGQADLGEQLTAVQHERDTFRAQTEDLSRQLAS AQEQVVVAQRQKEQIDQLTAKLQEAQDQVAQAQQLTQEHAAQSQQQDAQVKQQAMQIQQL AQQLKDSQIREAQLREQVAKSEPSTETGSLQKIAGAAASANTEPERATAMLTLAMQLHDQ YVDKGKAKAKEITEESQRKYEEIIGSANDYSNRTRSEADQYSTDTRANADNYLSGKTQDG DAYLNQKTEEGDAYLAQKTEEGNAYLAGKQQDGDAYLEQKQQEGDAYFAQKQEEGDGYLA QKTQDADTYFSDKHTEADNYEAEVQKRAFDYDSKTRTAADDYAQQVRDNLETQTKVIEGN IKGLKQFETEYRARLTDFLGQLVNQVSDTNNYDQDPQDNND >gi|148337400|gb|DS264459.1| GENE 329 361492 - 361773 167 93 aa, chain - ## HITS:1 COG:no KEGG:BAD_1134 NR:ns ## KEGG: BAD_1134 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 93 1 93 93 129 98.0 3e-29 MILSVIGSVVHFLVNAYILVLFVRMILDWVLALSPTWRPSGIVASLFDAIYQLTEPPLRW LRQYIRPVPLGPIYFDVAYLVLYFVLVVIDFLI >gi|148337400|gb|DS264459.1| GENE 330 361865 - 362143 437 92 aa, chain - ## HITS:1 COG:ML0920 KEGG:ns NR:ns ## COG: ML0920 COG1799 # Protein_GI_number: 15827440 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 1 79 119 197 210 83 48.0 8e-17 MSRITTIHPKTYDDAQMVGRAIRDGIPVVLNLTGVAEAVAYRIVDFSAGVVFGVRGSIER VTPRVFLLSPAQVNIKVEEPEDKGPAHDLFAD >gi|148337400|gb|DS264459.1| GENE 331 362140 - 362346 296 68 aa, chain - ## HITS:1 COG:no KEGG:BAD_1135 NR:ns ## KEGG: BAD_1135 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 66 1 66 160 97 100.0 2e-19 MAGFMKNAMSYLGMSDVAEGEDDFEDDVDTGETSFDSDHSVTPMPSSSASASTPSAPREQ SNPFQGVE >gi|148337400|gb|DS264459.1| GENE 332 362377 - 363633 1709 418 aa, chain - ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 36 333 44 343 401 318 64.0 1e-86 MYVSEQETMVSEIAQTDNFNDKTNIKVVGVGGAGGNAVNRMITEGLQSVEFIAINTDAKD LLRSDADVKISLNDASSRGLGAGADPEKGAKAAQDHQSDIEEALKGSDMVFVTCGEGGGT GTGASPIVARAAHQQGALTIAVVTRPFSFEGPQRSASAALGIENLRKEVDALIVIPNDRL LELSDRTIGIVDAFKTADTALLAGVQGITDLITSNSYIHVDFNDVNAILRGAGTALFGIG SARGEDRATQAAEIAISSPLLEESIEGAHGALINIAGPTDLKLQEAAAAVALVQKAIHPE AQIIWGLSLDDAYGDEVRVTVIAAGFDANSKKPDQPAEEKPAAAKENTVPLSALSAGVQA PAQQPQPVQTLAVPQVQPLSSYIPSTPDQNVASFDQTTEHEVVSANDPGDLDIPDFLR >gi|148337400|gb|DS264459.1| GENE 333 363786 - 365015 450 409 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 35 339 30 327 353 177 35 5e-43 MPDSIVNAYEESDVLDPRTDAERPSVPPVIKPVDLGPVHVETPVVLSPMAGVTNWPFRVI CESYGPDGLYVAEMITARALVARNPKALRLCRFAPSEKIRSLQLYGVNPSIVEQAAKIVI DENMADHVDLNFGCPVPKVTRRGGGSALPWKTDLFREIIQRVVKVCDAANVPVTAKIRVG IDHEHETFLEAGHIAQEEGCKAVTLHARTTAEYYGGHSDWSRIGELVSELDIPVFGNGDI WGANDALAMVAETGCAGVAIGRGCQGRPWLFADIKNAFAGSDERVDPTLGDVCRVIERHA ELLTEFYDGDERMAVHDLRKHVAWYLKGFPVGGSTRRAFMECENLEDVRREIGRLDPNIR FPERIADKPRGRVRFAKKVHLPYGWLESRETTHEEREALFGDDPMDASY >gi|148337400|gb|DS264459.1| GENE 334 365057 - 366532 2048 491 aa, chain - ## HITS:1 COG:Cgl2226 KEGG:ns NR:ns ## COG: Cgl2226 COG0423 # Protein_GI_number: 19553476 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 4 459 5 458 461 696 72.0 0 MAVSKLDEVVSLAKRRGFVFPAGEIYGGTRSAWDYGPLGVALKDNIKREWWRSMVVTRGD VVGVDTSIILPTPVWVASGHVAVFNDPLVECLNCHKRQRSDKLEESYAEKHGDKLPENGM ADIVCPDCGTRGKWTEPRDFNMMLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSR KKPPFGIANMGKSFRNEITPGNFIFRTREFEQMEMEFFVKPGEDEAWHQYWIDARTQWYL DLGVKPENLRHYEHPKEKLAHYSKRTVDIEYKFGFQGSDWGELEGIANRTDFDLSAHAEH SGEDLSYFNQATGEKYVPYVIEPAAGLTRSLMCFLVDAYDVDEAPNTKGGVDKRTVLHLD PRLAPVKAAVLPLSKKPDLQNVAQKLAADLRQNEWMIDYDEAGAIGRRYRREDEIGTPLC VTVDFDTLDDQAVTIRERDTMQQERVSLDKVADYIAERIGEKRVSVPQMPVEMGGEAWPE SVKIAEAGGLY >gi|148337400|gb|DS264459.1| GENE 335 366783 - 367394 639 203 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488948|ref|ZP_02029797.1| ## NR: gi|154488948|ref|ZP_02029797.1| hypothetical protein BIFADO_02257 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02257 [Bifidobacterium adolescentis L2-32] # 1 203 1 203 203 373 100.0 1e-102 MNKHKIAWIALAVGIVVVLMLTWLVGVSPRLTHIKEADAQTAQIEESNKKTRDQIETLRM ASETIGLQKDRLRQLQRQIPDGYNQNEFIDSLNAAADGAGVSIQSVTFDEATTAEVPSEM QGTIKAGRLVQVPVSITANGSYDAMRGFVQAVQGINRIAVPEDVTYTLDKGGDATKNNVT INCKIWSLLLNNDTVEDENVTKQ >gi|148337400|gb|DS264459.1| GENE 336 367410 - 368384 1029 324 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488949|ref|ZP_02029798.1| ## NR: gi|154488949|ref|ZP_02029798.1| hypothetical protein BIFADO_02258 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02258 [Bifidobacterium adolescentis L2-32] # 1 324 1 324 324 483 100.0 1e-134 MKLDMKSKKNKANSHRGRGKEIAYPDTSDGQKGTLLSMNVSDISNALKAGGIGKRSTAPE NPADWTMRANLIPRSIVGLNRDRAIKYLLTYVLIGVLIVSLVVSVFMFAQSTWADHRVEV AQQKTISLQKEKAQFKDVEDTLNSLDDAQKAKIAMLYDEMDWMKVADSLNSSLPEGGQYT NLELKSFQIASSNNSSSSSDNTSTVWSGNGVISADFTIESPNFYSAKDFINNFASIPTYK TGYVSSITKNDSEGGTTYTYTGTISLVMDGNTTSRSDNSAGATQANRDLLAKLRASLDKA ASGQSDASANQSTDTSSDASGSSN >gi|148337400|gb|DS264459.1| GENE 337 368393 - 369442 1232 349 aa, chain - ## HITS:1 COG:DR0770 KEGG:ns NR:ns ## COG: DR0770 COG4972 # Protein_GI_number: 15805796 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, ATPase PilM # Organism: Deinococcus radiodurans # 3 316 13 355 391 89 25.0 7e-18 MRAITALSIASDAIRAAVIADPYTDSPTIKHFQALPLPVGAVVDGEVVDAEVVTGLLKTL VQRFKFPRENTILVYSSRRMVFRETDFPYMSLADLRSTLPFQAKGMIPLPIEESELDFVP LSVVDDEQNGKQLHGILVATLRGGLEKTAYTAEEAGFVITSIDAGPFALARLFSDTNQAQ TEAVVNINGNCTDVIVLNNGKPAYMRVVPSGADDVSDAIANALSISFEDAERIKNQIGLQ NVTGDERLEKAEEVIRETTAQLIVGIRNTLNMYDVDHADSTISGIILTGTGARLIGLPPV LAGSINKMVRIGDPFIRFKLSKEVERQNIVAHAVDLGGVLGLVIGKKPR >gi|148337400|gb|DS264459.1| GENE 338 369482 - 370306 706 274 aa, chain - ## HITS:1 COG:VC2426 KEGG:ns NR:ns ## COG: VC2426 COG1989 # Protein_GI_number: 15642423 # Func_class: N Cell motility; O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, prepilin signal peptidase PulO and related peptidases # Organism: Vibrio cholerae # 15 268 13 283 291 115 34.0 1e-25 MDIVNDVPTVVILLVASLIIGCIFGSFLNVVIWRVPNHISITNPKRSFCPKCEAPIAWYD NIPIFSWLALGAKCRHCKEPIAARYPLVESLGGLSFLAVTAGGLFGAYPLWALPVLYVFA CVSIVIAFIDLDHHLILNVVLLPTLIATVLLLAVASFGIGEWTRLGRGALCALILFVFYF VLSLIWKGGMGDGDIKLAFILGLLLGWLGWPQFIIGSFAAFFIGGAISLVLLASKKVDLH GGIPFGPSMLLGAWLGIFAGVPIATLYLQLTGLA >gi|148337400|gb|DS264459.1| GENE 339 370312 - 372729 2134 805 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488952|ref|ZP_02029801.1| ## NR: gi|154488952|ref|ZP_02029801.1| hypothetical protein BIFADO_02261 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02261 [Bifidobacterium adolescentis L2-32] # 22 805 1 784 784 1425 100.0 0 MKQTGLWSRLNRRYRAALRERMGEHGAAMMLAILFVMVVLTTSALVMTTLLAQAIPYKNN KENSQANYAAESGLEVGLSYINETLAKLQGSTSLDDLQKVLPAVDADMNDSSKDGEFVKY DGASVLLNHVALNKTVKTSDTASYTPDDLSYRVRINFYDTNPDDASAEMIGSPSDLKNLQ YAEVVATGFINRYKDGRTAGNTKSPQAMKRAVCRIEAKTDSTTTNHSSALGVGGRMGMGF YAAAPYNRLDSQFVWVPVDYDGVSIGSDPTGEVKFSGTVDSGRTNTSQLSDGTATLNPVN RTCMLATTIPVTNEKKSIAENLDLSKSPQAGSGLVVLPAAYNAGGDTYQYTEECRADGAY SSLNTWVYYKDNSIRLASNMGLCVTGVSIDDTDGKTPATLQPCGTSYGVHFQGDYYMDPN KVAQQTEKNDPNSLLNKYQKWNFYNGFINAGYWNELTGDVSAQAASYDSALPESKGYAVA GVQSGKKTKFQRLEVTHYGGSPQDSGDPHFAGGNIKATPYSQAYMVSQWTYNFSDSYFSN GADMQDATASFSQAGEAGYGTNQMVNSASGFCMVMDGNDVYADTCDVHSADFDAKCYQKT IMGQGSDFISTSHCSTADKENFNFTSDRVSYTEDASADGTGIDTTIALHDTNGNAKYLHV SGSKVSLTDNPSDATKFRRYNEHNTSKAVSYGGKTQYPWAGTFQTSEGMCLTEIYPGDYV ESNGKKDRQYNRSDGHSMLKMVSCGTDRDVRGRLVKSQAWNASVNYGDAGSAGSITWTTT TTTVSIPTSTYFSAVVDSTVTSRKW >gi|148337400|gb|DS264459.1| GENE 340 372781 - 374058 1579 425 aa, chain - ## HITS:1 COG:DR1863 KEGG:ns NR:ns ## COG: DR1863 COG1459 # Protein_GI_number: 15806863 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, component PulF # Organism: Deinococcus radiodurans # 30 422 19 405 406 242 36.0 9e-64 MAKAQAQAPLQQNTTQKWKYKGVSLDGTKQMKGTIEANSRDQAVARITQMGAIPTELVNL SAGTGLNTEINIKAFEKYPSKKDFAVMARQLATMVAAGVSLIRALNIVTEQIENVKLRKA VQACVAQVEGGSSFSGAMSADPDSLFPPIMVNMVRAGETGGFLDKSLLTVADSFEADVRL QGQIKSAMAYPVVVLGIALILVMVMLLTIVPMFASMYDSMNAQLPFVTQILVDLGKVMPY VLPVLIVAVVALAMFWKRNRNKDIIRTWWDPFTLKAPVFGKLDTNVALARFCNNFSSMLA SGVPILQALDIVGSTSGNYVIDSSSKRVGRLVERGYRLADSMSTEKIFPNMLVQMVAIGE DSGAIDKMLSSAGRAYDEEAQSMAKQLTSLLEPLMILFLGVVVGFMVVALYMPMFSMFDA INGQA >gi|148337400|gb|DS264459.1| GENE 341 374169 - 374597 560 142 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488954|ref|ZP_02029803.1| ## NR: gi|154488954|ref|ZP_02029803.1| hypothetical protein BIFADO_02263 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02263 [Bifidobacterium adolescentis L2-32] # 1 142 1 142 142 249 100.0 6e-65 MKSVRNALNRRAKGEKGFTLVELLVVVIIIGILAAVAIPIYLNQRKAAWNSATESDVKNA SIVMETIMTNNGGKVPAAVKTSCGPGATHCDIFDGNEVTVSDGVTLTITPNGTTYQIEGS NNNDSNCKTYTYDSATGSITHN >gi|148337400|gb|DS264459.1| GENE 342 375095 - 375631 233 178 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488956|ref|ZP_02029805.1| ## NR: gi|154488956|ref|ZP_02029805.1| hypothetical protein BIFADO_02265 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02265 [Bifidobacterium adolescentis L2-32] # 1 178 46 223 223 299 100.0 6e-80 MFTVSIVQYLHSTTADAIRTRSATEIATSVQALDRYVRNAEGVEEAASGDRLTLVTTDAD GIRQCAVIEYTEATWSGGRVDDYGSVVVKTRPYATGAGGAWSEHAVLTAVMNNSTASTSD DSLFKNKLFSMDGGTRVVRYSPVTGSYVGGKPVTSNTLTSFTARNVGSSASVDFSQCR >gi|148337400|gb|DS264459.1| GENE 343 375783 - 376562 483 259 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154488957|ref|ZP_02029806.1| ## NR: gi|154488957|ref|ZP_02029806.1| hypothetical protein BIFADO_02266 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02266 [Bifidobacterium adolescentis L2-32] # 1 259 6 264 264 471 100.0 1e-131 MEHSWRRAVNDAATGLAIHNVKRLPKRGESGFTLVEVLVAIVVLSITGLAAAQFAITAIR TSYAQQQRSAAIALGSDGIERMRAQIADHTSAPSSYYTDLLPGMGVDDVKKAHANLTAVG AITSQFSDLEATATPDADTSKYIQPVRTTTGKDAKHTTYTVNTVIEKCYRESGTMDCRTA SELGIDGHASISGLDGTPDASLRSSILSQDNIPTKGFTFMAKTYMPMVRVVVGVTWSDNI GADKTAVYTTNELLNVIGA >gi|148337400|gb|DS264459.1| GENE 344 376875 - 378632 1760 585 aa, chain + ## HITS:1 COG:aq_1971 KEGG:ns NR:ns ## COG: aq_1971 COG2804 # Protein_GI_number: 15606969 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB # Organism: Aquifex aeolicus # 93 583 67 563 566 436 47.0 1e-122 MSDAGSGSRFPFLKRNRNDDTPSDFSQRMDLNSPVTGEINQIFTPSQPRHAAAPSDATSD FPAMPTSTEGMDENTEREYAMALAQGMSLPFVDLNEYQVDKEVISMVPDDLCRRNQLLPL SIVNGRITVAMANPKNFAAIDDVSASTGMPVIPMVAMPSQVKDAINRYLRANAELTELSH EIAATAKKEVDLESDSGEDASPVARFVSLLINQAIDDHCSDIHIEPQEDGLLVRYRIDGV LHVFQKAPKAMTQGVISRIKVMSDMDIGERRKPQDGRITVKHNGQKVDLRVAALPTVWGE KIVMRILSTPSGNLKVEDLNFSQRNFDVFSKAYNRPYGLVLVTGPTGSGKSTTLYATLGD VAKPEINIITVEDPVEFRMRGINQVQVNNKAGMTFAAALRSILRADPDVVLIGEIRDQET ANIAIEASLTGHLVLSTLHTNDAPSAVTRLTEMGVEPFLLSSSLAAVMAQRLARRLCKKC KRQDTATEAELRTLGVPHMPDTPLPTIWRPVGCRECANTGYSGRVAIQQVMGVDSTMEDL IARGATSIDIDKAAKEQGMTTLRKDGWQKALQGITSVEEVLRVTV >gi|148337400|gb|DS264459.1| GENE 345 378772 - 380574 1703 600 aa, chain + ## HITS:1 COG:DR1963 KEGG:ns NR:ns ## COG: DR1963 COG2805 # Protein_GI_number: 15806961 # Func_class: N Cell motility; U Intracellular trafficking, secretion, and vesicular transport # Function: Tfp pilus assembly protein, pilus retraction ATPase PilT # Organism: Deinococcus radiodurans # 259 593 21 354 420 313 49.0 8e-85 MTIEQTWNNGGYLSGLKGVTIPNNTPSFNEDPRKGRHWSSDNAIQADDESLKGIFASLNS MPTVSQQDVQIPDPQPVSQSQPSEQSVAQQQTTQAIQQSQEAHVFPTTSDRQPVGTGSLQ FDEDTDATQQNPAYEEHGPIQQIDSNPPSFVPGATPFAKRQTDIAETAAQQMPPTITHIP QDAAFQRPQPQQQQMCQPQPQTRPFADFVVPETNDADEDAVPEERKIKAEQVEQTLRTEH PDADDEFVSAIRQLVKLNASDLHLVINDPPMLRVDGKLRPAKGLSVWTKDHTYEAVKVMT NELEMERFKDDLELDISFAIGDLLRFRVNVYRDRMGVCAALRTIPTEIKTAQELGIDPRI ADLALLPRGLVLVCGPTGSGKSTTLAAIVDKANAERADHIITIEDPIEFVHQHKRCVMSQ REVGTDTKSFAEALKRALREDPDIIEVGELRDLETISTALTAVETGHLVFATLHTQDAGS TVDRLIDVYPENQQQQIRVQVASTLRAVIVQTLIPRASGHGRAPATEVMINNPAVAALIR SGKAHQIRTVLQSGEKEGMHTLDQDLARLVNKGVITFEDALVKVQVREEFEKLCGARKSF >gi|148337400|gb|DS264459.1| GENE 346 380736 - 382517 1198 593 aa, chain + ## HITS:1 COG:no KEGG:BAD_0060 NR:ns ## KEGG: BAD_0060 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 30 579 54 594 594 382 39.0 1e-104 MSSATVAATDNRTRCDAIRHWLTPHRLHCIVLAAYVIVVGTVMCFHEPWFDEAQAWLIAR DCSWREMILERPHYEGHPPLWWMMLAAPAKLGVPYEIGLKSINLTCATLMIWLLEFKTKL PEPFKVILPFSYFLCYQYGVTSRPYALMVAAMLLVAINWKTRDEKPWREALSMMLLCLTS SYGLVIAGMFAANWVVRFVWQEHSLIRNRRRFIALLALLAAAMAILIDVMPAKDVYSGNF DISGMTQPAPLWIQICNSWLLLPAEALFTSTVSDTNLVFIGLSPTLLYTGTVSCLMWAPL IHISRRRHNAMLLLSSYTVMCLVFAQHFSMHHLGILLGFFIAVLAIDCDERRIGVDDWPA WCATMADQFAGKLGVKKARNYLIMLKALALGAMLISVYWTINASICDIRYEYSSSRTVAS FIKTNHLEQYRWMAGWTRINSTNASPDVKERINQGGYCADGKDCIDYTSWVSGTLVTADP YFKRTLMSNAYKGRSYISWEWCIDPYAGKQDIETWRSWGEPEFYDTIYQPFFFSALGYDR NDYTKIRIAETVTPWKDQRSRGSVKIYVRNDIYKNVLHSPDTGIAWPDGAKRR >gi|148337400|gb|DS264459.1| GENE 347 382561 - 383712 1024 383 aa, chain + ## HITS:1 COG:no KEGG:BAD_1139 NR:ns ## KEGG: BAD_1139 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 383 1 383 383 655 90.0 0 MPYHNPNSRSRRNVLRIVGVLVVLAVIAGVANFLHATTSEAAGNVKPQIETMQGIRQTAQ DSITFAQGLDDPDRFAAHIETVQQCMDDYDRLADAKQIKYLLSDNLQERIIGLLYRNQQR TIIDSMRVAAHNLDGQTKELLSAVDAAMADDFSQHAAQWLLQVDDPTQANELIDRYGKQR AYASMREMLADLRSLHKLRSDVKQQVSTAVSNLHNAEAAAAAIAVPERNGDLDPAGWYTL ATNVASTMGVQIEQTMEFNCGGQSGENPSGFVAAYYCQMPDRSQRNVVHMLTTHPDWTQT ARSPWLVDMVKHELSHRSIMISCGTTQPTIAADRTEAVTNSYSVLFFGADRDRITNQQQG VAEYAMDASSDQLATAIHDGNCG >gi|148337400|gb|DS264459.1| GENE 348 383737 - 384330 589 197 aa, chain - ## HITS:1 COG:no KEGG:BAD_1140 NR:ns ## KEGG: BAD_1140 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 8 197 1 190 190 374 98.0 1e-102 MLTNNRSMKRAIAALCVATLACSAVGCGEEKKEAIPTFSNATYIAQMATLKCYYHNTAKL SHEGSWFFNNGYKRMWMEYSGIVKYGIDADKVTISPDANGHRVIITVPPAHVLDDPDVNE KSFSKPLVSTGFATSITAEEKTEMFDKAQQSMLKQAKTDSALLAQAEARARTILEQYVRN VLGDDAKNWTIEFKDVQ >gi|148337400|gb|DS264459.1| GENE 349 384317 - 384907 424 196 aa, chain - ## HITS:1 COG:no KEGG:BAD_1141 NR:ns ## KEGG: BAD_1141 # Name: pstC # Def: phosphate ABC transporter # Organism: B.adolescentis # Pathway: not_defined # 1 196 1 196 196 321 99.0 9e-87 MLFGAVAAIVTVAVVLFVWNGVVKPVFDNARTESTISVESQLQAAVNIDDLSTAKFHYGG VAVKKDNAGKDKWHVAYEATVTAGVKMSDITFEVDDTAKTVTPILPKPTIGDVVVDSGRL DFFENNPSVEIDEVIKLCKQDAQQETKTNGDIISIAASNLEQTVDALTKDLVEAKGYKLQ KAETVKLTKETAHADE >gi|148337400|gb|DS264459.1| GENE 350 385348 - 385602 225 84 aa, chain - ## HITS:1 COG:MA0407 KEGG:ns NR:ns ## COG: MA0407 COG0716 # Protein_GI_number: 20089301 # Func_class: C Energy production and conversion # Function: Flavodoxins # Organism: Methanosarcina acetivorans str.C2A # 6 83 92 172 179 57 37.0 6e-09 MVGAGSTVYLGFPIWWMAPVWLVNDSVKSNDFAGKTIIPFCTSASSDIGNSASTLQKMAG SGTWLTGHRFSESVSEKDVTDWLI >gi|148337400|gb|DS264459.1| GENE 351 385617 - 386477 992 286 aa, chain - ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 277 15 292 297 315 54.0 7e-86 MEYVKLANGVEIPKIGYGVFQISKDDAPRCVREAIETGYRHIDTAQSYFNEAEVGQGIKD SGIDRKDLFLTTKIWISNYGYENTLRSVDVSLKKLGTDYLDLVLLHQPFSDTYGAWRALE KLYKDGVIRAIGVSNFYPDRLADMVAFNEIAPMADQVETNPLNQQIEARKNMVKRGVAQE AWAPFGEGMQNMFSNPTLARIGEAHGKSVAQVILRWLTQRDIVALPKSTHKERMEENLNI FDFRLSDSEMATIAGLDTKTSMFFRHDTPEAVDRFVGYVKERAGRE >gi|148337400|gb|DS264459.1| GENE 352 386721 - 387164 456 147 aa, chain + ## HITS:1 COG:CAC3507 KEGG:ns NR:ns ## COG: CAC3507 COG0789 # Protein_GI_number: 15896744 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Clostridium acetobutylicum # 15 126 5 116 126 77 31.0 7e-15 MAITAVPLHKNMKTYTMKQACKLTGMNYEALKFYCNSGLVPGLKRDQNNRRVFDARCIAW INDLTCLKRCGLGIKEMRHYTQLCLEGESSIPERQEILAEKREHLETQLEELRKAIAYID EKQRFYADVTAGRTAYCSNVIDTTQSD >gi|148337400|gb|DS264459.1| GENE 353 387446 - 388330 1199 294 aa, chain + ## HITS:1 COG:PH1157 KEGG:ns NR:ns ## COG: PH1157 COG2145 # Protein_GI_number: 14590984 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Pyrococcus horikoshii # 18 285 4 254 265 126 32.0 6e-29 MSDDSSANDALGALRAAIKQAVMDVREQTPLAQSFTNFVTINLVANAQLAAGGTAAMSYL PDDVIATAEIAGSNYINVGTLLPFFKDALPEIARKLHENGKTWVLDPVAAGIGETRTFIL ESFRDAPPTIVRGNASEVIALDAMWGLADADSTDPTTRPAGVEAVDEVDAAIDAAKRVAR HLAKHSPVGKGAVAVSGAVDLVTDGERTFRLPGGSAMMTKITGAGCSLGGVTATYLAVAE PLVAALAASLLYDRASEIAEVKSDGPGSFQVALLDALWNVTADQVAASDIIETN >gi|148337400|gb|DS264459.1| GENE 354 388463 - 389218 1043 251 aa, chain + ## HITS:1 COG:BS_thiC KEGG:ns NR:ns ## COG: BS_thiC COG0352 # Protein_GI_number: 16080880 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine monophosphate synthase # Organism: Bacillus subtilis # 15 230 13 210 222 97 34.0 2e-20 MNNYPFASMRDCFDMSAYFVVGPQDCKGRPVTDVVDDALRGGATFIQLRAKNADAKDITE MARDIAQVIKNSGKSDSVAFVIDDRVDVVWQARDKGIKVDGVHIGQTDMEPQEARALLGE DAIVGLSAETESLVKLINELPSGCIDYIGAGPLHVSTTKPEASVGGNDGSGHTLDEEQIN AICAASEFPVVVGGGVHADDTEMLARSKAAGWFVVSAIAGADDPEAATREMVTRWKAVRG DAKHGYAPRVK >gi|148337400|gb|DS264459.1| GENE 355 389280 - 389411 64 43 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAPPDESDPAMLNTGGNVLVMVTLLIRLTDSLIIFTELTDTV >gi|148337400|gb|DS264459.1| GENE 356 389347 - 390189 1172 280 aa, chain + ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 8 280 7 263 265 266 50.0 2e-71 MTSTLPPVLSIAGSDSSGGAGIQADLKTMLANGVFGMTAIAALTAQNTTGVTMVTNTPPE MLAAQIDAVFEDIPPVAVKIGMVSSAELITVIADRLTAHNAKNVVLDPVMVATSGAKLIE DDAIAALTSKLFPLATVITPNMPETQVLCDLAVEQGAGAIDYENGESISTENDMVTAGHL LAGHFGCAVLVKGGHGTHDASDVLVEPDGKITWFRSRRINNPNTHGTGCTLSSAIASHLA LGEALPTAVDHAKLYLTGALEAQLDLGHGSGPMDHAWKWR >gi|148337400|gb|DS264459.1| GENE 357 390278 - 390643 585 121 aa, chain + ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 24 121 16 116 117 75 42.0 3e-14 MTLDRNAEKQEVPVNPETGKPYINTLAAVAISPAGASPEKSTYVAQAVDVIRESGLPNET NAMFTNIEGDIDDVLKVIRDATMKLAGQGYRTDVVIRLDIRPGFEGQIHAKQELVNEILS K >gi|148337400|gb|DS264459.1| GENE 358 390746 - 391789 993 347 aa, chain + ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 1 316 1 316 335 139 32.0 9e-33 MTTMKEIAEQTGVSISTVSLVLNGRDEGRVNPALAKLVRNKATELGYKINPLARSLRTNK TRILGFISEEVATTPYAGGIILGAQDAASAYGYMLFTVSTDGKASEENEIATLKRYGVDG FFYSKMSNRIAHVPESLNEYPVVMVDATDHENKVPSIEPDEFMIGYDATNRLIQAGCKRI AYVGCAENMIAQDGRLAGYRTALQEAGRAFNPSLVCNVMNNGPALRAVNKLFDDEHPDGF FCFNDARAWYVYECAARRGLTVGKDISVVGVDNHRVFAETLEPQLTTVELPHYEMGYWSA CKLISMIEGKDVDTSSCPSARASLPPLDAPIPAKIHCALLEKDSVIS >gi|148337400|gb|DS264459.1| GENE 359 392136 - 393467 1705 443 aa, chain + ## HITS:1 COG:ECs3241 KEGG:ns NR:ns ## COG: ECs3241 COG0477 # Protein_GI_number: 15832495 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Escherichia coli O157:H7 # 9 420 7 405 415 305 38.0 9e-83 MASKTRSVWKNPSYLQSSFGIFMFFCSWGIWWSFFSRWLTDPTHGLGMSSAEQGQIYSIN SLATLVIMFVYGTIQDQLGIKRKLVIFISAVAACVGPFVQFVYQPMLTAGGTTRFIGVLL GSIVLSAGFMAGCSLFEAITERYSRKFGFEYGQSRAWGSFGYAVVALCAGFLFNINPMLN FWVGSICGLGMLCVYAFWVPAEQKEELKKEADPNAAPTNPSFKEMVSVLKMPTLWVLIVF MLFTNTFYTVFDQQMFPNYYASLFPTTEIGNATYGTLNSFQVFLESAMMGVVPIIMKKIG VRNSLLLGATVMFARIGLCGVFHDPVSVSIVKLFHSIEVPLFCLPAFRYFTLHFDTKLSA TLYMVGFQIASQVGQVIFSTPMGALHDAMGDRPTFFTISAIVFAALVYGFFVIKKDDQEV GGDPFYTDKQLKAMKAAGAEVKA >gi|148337400|gb|DS264459.1| GENE 360 393670 - 395226 1969 518 aa, chain + ## HITS:1 COG:ECs3243 KEGG:ns NR:ns ## COG: ECs3243 COG1621 # Protein_GI_number: 15832497 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Escherichia coli O157:H7 # 21 505 6 469 477 324 38.0 2e-88 MTGFTPDAPVLHEIKNHGEELTKAEAGVAAFAAKRNNRWYPKFHIASNGGWINDPNGLCF YKGRWHVFYQLHPYGTQWGPMHWGHVSSTDMVNWKREPIMFAPSLEEEKDGVFSGSAVIG DDGKLRFYYTGHRWANGKDNTGGDWQVQMLAEPDNDELTSATKRGMVIDCPTDKVNHHYR DPKVWKTGDKWYMTFGVSSAEKRGQMWLFSSDDMVKWTYEQVLFEHPDPDVFMLECPDFF PIKDVEGNEKWVIGFSAMGAQPSGFMNRNVNNAGYMIGTWTPGEQFKPETEFRLWDCGHN YYAPQSFNDGKRQIVYGWMSPFVEPIPMQDDGWCGNLTLPREITLGADGDLHTAPVAEME GLREDTVDFGAIDLDVSGEKTIVDDAEAVEIEMTIDLANSTAERAGLRVHATEDGAYTSV AYDNQIGRVVVDRQANAQGDRGYRTAPLSEAELAAGELKLRVYVDRGCVEVYVNDGRQVL SSYSYASEGPRAIKLVAESGTLKVKSLVLHHMKSIGLE >gi|148337400|gb|DS264459.1| GENE 361 395553 - 396356 1007 267 aa, chain + ## HITS:1 COG:CAC1399 KEGG:ns NR:ns ## COG: CAC1399 COG0600 # Protein_GI_number: 15894678 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Clostridium acetobutylicum # 15 231 8 224 250 119 29.0 5e-27 MAESHVQHKLLGMAKRRIPTLIAVITLLVVWEAWVRLGHVPSTMIAAPSEIAQATVETWP TLWPATEVTLLEGTVGFLFAVTCGILIGILLYCSRIADAALFPLLSAAQTMPLISIAPLF LIWFGFEVSGKIVIVAVFGLFPIAVQTIRGLEAVPQFYSDVALTCGATRAWTLWHVKLRV AARQIYGGIRVSAAYIFATATTAEYLGARKGLGIWLQAAYNSFRTPLIFSATLVIIVITG MLMCLVNLSERLLLGPADADADPDADQ >gi|148337400|gb|DS264459.1| GENE 362 396627 - 397694 1491 355 aa, chain + ## HITS:1 COG:mll1755 KEGG:ns NR:ns ## COG: mll1755 COG0715 # Protein_GI_number: 13471703 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Mesorhizobium loti # 43 343 33 326 338 186 36.0 4e-47 MKKTIFSKAIAILGSIAMLVGVAACGQSNDSTKTAADGNGLTKVTFMLSWAPDTNHIGVY VAKNKGYFKQAGLDVDIVAVAQAGAEQAVNNGMADFALSNLTNVGIYTLKGAKIKQVMQV QQKPSAIWCSLASNKDIKSPKDFDGKTFATFGSNESDAVIRRMIQTDGGKGTFDKVTVGT STFQTLSSKKADFGGFYATWEGVQADMYGPKLNCFTEPDYGVPGNADTIGVITSDKTISS NPGLVKKFVQATKKGYEYAYSHPDDAAAILVKEAPDANLKLDFVKKSMKTIVDDQYWGDP AKIKDGSFTFGTNDTAGAQKYFDFLAEENAYTDSHDKVIHTAPVAKDISTDEFLK >gi|148337400|gb|DS264459.1| GENE 363 397866 - 399194 744 442 aa, chain + ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 210 441 98 314 316 164 46.0 3e-40 MAVPMKTTNGNRKLILDVDTGIDDALALAYLASFNNIEILGVIGTYGNVAADTAVYNTAY VLERLGFRNVPVLRGSTRPSWAASFIPDAGCAQFHGTDGLGGFGPAVGSPAVACVSDSGE TDIWKSDSAPYVSDSAESDIQSTTNTVYASDSGESDIPGTLSTTYVSDSGESDTRVRRGL ISVGGYDVHDPHANPAADSFSLSFTTCDGAAHSPALPEGVRFIVDMVRKYGSDVTVVATG PLTDVDAALTAAPEIASKLRLVMMGGTLTQEGNCWDTTAETNIIQDPEAADRVFHSGADV TMVGLDVTHQCLLGSDATMRWRQAASQSHDPRTDARTFLADIVDFSIAANIQADARLFST GMPLHDPLAAAVAVDPSLVECFDLPMKVETETGDFHGTRGRTIGDPAGLIDPSAPRVHVA LTVDHDRFITDFTWRIAQLAGD >gi|148337400|gb|DS264459.1| GENE 364 399353 - 400144 1068 263 aa, chain - ## HITS:1 COG:MT2430 KEGG:ns NR:ns ## COG: MT2430 COG0020 # Protein_GI_number: 15841873 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 12 259 38 294 296 285 55.0 9e-77 MAFENVDYKSLDIPAAPFSDPSIIPDFPKNKVPRHVGVIMDGNGRWAQQRGLIRTDGHQA AEPVVFDTIAGAIEAGVRYLSLYTFSTENWKRSPQEVRFLMGFSRDIIHRRVDQMNEWGV RVRWSGRRPKLWKSVIDELEVAQEKTKNNKTIDVVFCLNYGGRAEIADACAAIAREVRDG KISGDRVTEKMIAEHLYNPDIPDCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCG RDVLWRSIDHYIHRDRRFGGVKR >gi|148337400|gb|DS264459.1| GENE 365 400150 - 400890 533 246 aa, chain - ## HITS:1 COG:MT2431 KEGG:ns NR:ns ## COG: MT2431 COG1381 # Protein_GI_number: 15841874 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 1 246 1 241 265 183 43.0 2e-46 MPLYQDEGVVLRTAKLGEADRILTLLTRDHGKVRAVAKGVRRTKSRFGGRLEPFMRVALL IAEGRSLDVVSQAESIAAYAGPICADFQAYTAANVICETADKLVATEKEPAAAQYRLVLG ALNALAKHAHDSSAIGDSYVLRALAIAGWTPRLRVCVVCGEPISSTLSWYFSIPAGGLMC AADHTPESEAVSWDAICRFSALVDGDWGELDGVPAAASIQRETHQIVEEWGEYYLERPIR SMRLLD >gi|148337400|gb|DS264459.1| GENE 366 400974 - 402599 1601 541 aa, chain - ## HITS:1 COG:no KEGG:BAD_1156 NR:ns ## KEGG: BAD_1156 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 541 43 583 583 1062 100.0 0 MVNLPIFIMLLGILVSVANLTASTWNYEPTEQTIETLDANTAVTFANPSGEKLAKKGDYE VAKRYVTIKAKRPSTGEIQNIKVLIRKPKGAGNGRPGVVFMHGAGYGTCDNSFGDMASDL SSAGFVTAVLDKPVWSTNDANRDYPGSAAIYDQVINLLRKMDTVDASKVGIYATSESTWI SSYLLQRDPDVAFQVLLSPMVYEPRYSLGFLAAQDFALVGAHDGYQSIVRRVFNIDASLF GLTNLDIDTLTPKAYAIPTLVAYGTKDVMTAQVEGTEKIVDLAHQAGNWDVTIRTYPIAN HVLRLGDEANSGTPFADAYVDDVVDWAVGTTHGLKQTSERVAGTRMYQSIAVPLDLKANR GLTIYLVALHASMLVLLLAAGVLWLAVLMRKIWARAHGRRYRLGLAQGFKNSLVTLTIAT MATFVLFCAGLGDVIMGVVKLAWGSAPVENPGVMYWSWPVIQIVCVAVVWAWSRVFMRLI EEATHRGIAQWPPRKGAIGEIVSGRQPVLASTRFGRVMFWLTVAAMFCVLLVFAFWGLFI Y >gi|148337400|gb|DS264459.1| GENE 367 402790 - 403989 1440 399 aa, chain - ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 21 394 15 387 387 465 67.0 1e-131 MPEIEKPFRKTGDAAISESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNTLTADVPATL QQIAELTAAGCDIVRVAVPSQDDADALPEIVKKSPIPVIADIHFQSKYVFQAIDAGCAAV RVNPGNIRKFDEVGPSICKAATDAGISLRIGVNAGSLDKELYAKYGGPTPEALVASAMKE ARMFEDVGFHDFKISVKHHDVVTMVQTYRLLASKGDWPLHLGVTEAGPTWQGTIKSCLAF GALLAEGIGDTIRVSLSAPPVEEVKVGCKLLEYMGLRPRKFDIISCPSCGRSQVDVIQLA NAVTEGLKDVTAPIRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIQTVPEDQI VETLLAKAQEIAAQMEADGQLPATATGPVVVPVTQNGNC >gi|148337400|gb|DS264459.1| GENE 368 404054 - 405232 1380 392 aa, chain - ## HITS:1 COG:Cgl1969 KEGG:ns NR:ns ## COG: Cgl1969 COG0743 # Protein_GI_number: 19553219 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Corynebacterium glutamicum # 6 392 8 387 392 326 51.0 6e-89 MQPSTVVILGSTGSIGTQGLDVISRHLDRFTVTGLAAGGAHVELLAQQAAKFHVPTVAIF YKEAVPALREALEQVGAGNVNITAGPDAVIAMAGSGADVVLNGITGSIGLEPSIAALQAG SQLALANKESVVAGGHLLFSAQVRDKQINPVDSEHSAIWQSLRSGTHGEVSKLVVTASGG PFRGWKRDQMTDITPEQALNHPTWNMGPVVTINSSTLMNKGLEVIEASRLFDVPPSRIDV TVHPQSIVHSMVEFRDGATIAQASPPDMRLPIALGLSAPERLGNVAAACDWTKAATWTFE PLDNEAFPAVNLARHCLESSEKHTAVLNAANEQAVHAFLEHRLPYLGIVDTVREVLDEMD AELRGNPLFASVEEMSRLEQEARARADKLINK >gi|148337400|gb|DS264459.1| GENE 369 405400 - 406953 1616 517 aa, chain - ## HITS:1 COG:no KEGG:BAD_1159 NR:ns ## KEGG: BAD_1159 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 517 53 579 579 650 97.0 0 MAQEPETEKNASGIAHAAKRKWGYDAEQVDAFLERAHMLYEGEGAQLTQHDIQNVSFELV KGGYVIAQVDAALARLERAVVDKQTTWEISQHGRVAWKAQTEDLFKKLDAHAEREHGQRF KPGEGKNPSYDRKQVDSVIDKCLTKAAGELGVEEVSEADAKAIADTNSQTLSNVIFTQRK GKRGYDERQVDYYLAACAQLLTRLESYARVADFVGEPSEEAMAAAAPSVAPASGDSAAGE TQMIAPLFAAPSATVPAAPVPPTVPTVTPSEEDSFDALNKAEHEIFTSAVTSPVSVPATP MNTPPAVPVVPPVFQPQTDSASSAPSAVEETQAFDPLADDAMEDAAPKAPAPTATDSQAP AAPAFSPAPVEPEPQQDPSLAALAHLAHTINETNQTENTFTPQVPSLSASDLPQVTTGST SLSSLAASVPPSFTPEPAAPATPVPVVEQAPAEPAAPAEPAVEPAVVPATEPSAEPDADK QQEDKKPEPSPAFRSIFPASGNDDNLDIPDLSFPSFE >gi|148337400|gb|DS264459.1| GENE 370 407434 - 407850 510 138 aa, chain - ## HITS:1 COG:no KEGG:BAD_1160 NR:ns ## KEGG: BAD_1160 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 138 1 138 138 234 100.0 6e-61 MNQTASDNAEEFGFHAGDLVQEWLWDDDVDDSIRAKIEELTGEELVDEDYDSAVDGVIIW WRDGDDEDELADTIVDAYAVLGDDGPLWVLTPKPGRPGAASSSTVQSAAKTAGMNAATPL TVSSDWNGIHLRAFGKGK >gi|148337400|gb|DS264459.1| GENE 371 407969 - 408883 958 304 aa, chain - ## HITS:1 COG:Cgl0759 KEGG:ns NR:ns ## COG: Cgl0759 COG3480 # Protein_GI_number: 19552009 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Corynebacterium glutamicum # 181 292 232 343 350 99 43.0 6e-21 MGGMADMQETQRVHAKSTRNGSSQGLLPRIRRRWRQVGRWFDVRPWRYLAGPIVAVLCVL VLIAPSAYVVQEPGPTQDVLGKVEGKQVIDVSGVKTHKDSGKLLLVTVNASGVPGYPVTN AQALLAWANPKATVIPQEAVFSVGQSAKDYAKESNKEMSSSQNAAATAAKRFLKAHGYDV SGMKVSMHVDDIGGPSAGMMYTLGLIDKVTGEQLSGGKTIAGTGTMNAKGKVGAIGGIRL KMIGAKRDGATWFLAPESNCSDVVGHVPQGLHVVKVGTLDEAYDALVAIRDGKGGSLPQC TVKQ >gi|148337400|gb|DS264459.1| GENE 372 408937 - 410496 2053 519 aa, chain + ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 61 439 70 425 472 192 35.0 1e-48 MDENAIRQWLIDCFGPIQGEMAWNQLSNMPEAVRDQLMSQDPSTLPKPEEVKSMMQAFTA GGLNTMGDMQQAVEQGPINIKLAKSLALQQANGAGSDSSVNAETGEIARRAISEANLWLD TACEFNPAQGETQLLTRAGWVEDTIDAWAQFASPVAESMNDALASILSQRFGDGEIQTEI SGVFAGPIEIPIPDEMKNPAKLMRFVGNTSFAMQLGRAAGDLSHEVRGSFDQGIALLKNP AGGLIVQNVTEYAKSLDIDVNEVMGYLALQELAHARLFASVPWLMPRFEALLGKYARGIT IDMDAMEEQIREAESIDPDSMASAVNITKVAFPDTPEQKQAMKALENLLALVEGWVDAVV WRAGMAHIPHIEQLREMLRRERAIGGPAERTFESLMGMQLRPKRMREAAALWESIGAQEG PEARDAKWSHPDLLPQLPDEQSEDSSNEENGAASATTGTEQTTAQQDIPDSIDWDAELSK LLDEEEHKGDDADGTNDADGTDDAGDTNASGDPQSPEEA >gi|148337400|gb|DS264459.1| GENE 373 410479 - 411978 1090 499 aa, chain - ## HITS:1 COG:MT3291 KEGG:ns NR:ns ## COG: MT3291 COG0210 # Protein_GI_number: 15842783 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 1 394 1 402 700 252 42.0 1e-66 MDATAEAILDGLDDAQRMAATAVRGPVRIIAGAGAGKTRTVTRRIAYACATKAWDPRATL AVTFSVKAAAEMRNRLSQLDVASDVKAATFHSAALHQLRRIWPDVCEGPMPFISRNPREI VEHSLRRVTTQQVDDDTVRNLQAEINWCKISLIAPEDYERVCAAIHHQPPAGLEPSQFVD VYKAYETEKINRNEIDFDDILLITCHLIESDEDVAASIRSGITWLTVDEYQDVSPLQHRL LTRWLGDNRNICVVGDPAQTIYSFAGASSYNLLNFASEFGPLTADVRLNNDYRSTPQIVN YANRVLEASPQRADYLKLNSKRDPGRRVSQTVYNSDLEEARGVAARIRRLVDEGASPGDC AILTRVNAQQKILCRALGEQHLRYRVKRDSGWQNSALADDAQTRLAMLEALGAGGDVKGV TISTIHASKGLEFKHVFLIGCSEGLIPYGSPHEGDLLEEERRLMYVAVTRAEDTLDVSYA RAREDDGSDRGRRKSRFFR >gi|148337400|gb|DS264459.1| GENE 374 412092 - 413663 1502 523 aa, chain + ## HITS:1 COG:no KEGG:BAD_1164 NR:ns ## KEGG: BAD_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 523 1 523 523 931 99.0 0 MTERSRFMMAALASAAMPNATIAGTRDSEQVNATDKGYGIDHAVVQDAAGKLYDTFASNT PKGRKRLVGRVRAAQTLMGNRELGGLGFDVDRVLAFSNGEQERSVTGDVSVMIATHHDGQ ARPLTLLTLDDCASVGTALGAIHRLRPDFLQEAGYPVFSTGQIRAQLTAWIKRLRQAGHV PQEITTSWSDVLETDGLWSFATCPVHGGLSDGDVLFSGSSITAITNWQNMQVNDPARDLA WIFSKLDENHRNALLSAYGRMLGNRLDDLIMLRANLWLQMEQVGDFISALNQADSVKIMQ FKAQVERLAHQLGMLTAKNHRPSETRQDEQKAGNRPPSTITVGTLLDESERRRQAVAQQS NDADATGERHIDATDMDDDRTGDFDVTGSQPVRKTKQIVDDATEAFDVTAAEHIASAGMV SGNADSDDTSEREESPVSTFVPEQSARERHESLPSSSTIVISTLQTADGSDDTNEEEIPQ AHSEAATMLIPLLERDEATMQKAKAEVDRLQAEDATDEKPRVE >gi|148337400|gb|DS264459.1| GENE 375 413715 - 413939 444 74 aa, chain + ## HITS:1 COG:no KEGG:BDP_1626 NR:ns ## KEGG: BDP_1626 # Name: not_defined # Def: ATP-binding protein # Organism: B.dentium # Pathway: not_defined # 1 74 1 74 74 116 89.0 3e-25 MDIELGIQNVARTVTFSTEQSADEVNNVIAEAVENGKTINLTDDKGRRIVVPAGSLGYAI IGSETKHAVGFGNL >gi|148337400|gb|DS264459.1| GENE 376 414065 - 414967 893 300 aa, chain - ## HITS:1 COG:CAC1092 KEGG:ns NR:ns ## COG: CAC1092 COG0613 # Protein_GI_number: 15894377 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Clostridium acetobutylicum # 15 286 6 274 274 128 30.0 1e-29 MSHVSYAEPPAQGWDIHCHTVFSDGTETPRTLVAQARKLGLHGVAIADHDTTAGWDEATE ASEEIGLPLLLGTEITAVDEDVSVHMLAFQYDPSNEHMSSMFANTRAARLHRTKRMVERL SQDFPITWDDVLAQVKEGERTTIGRPHIADALVAAGVYETRSDAFADAVSAKSKYYIPTP SPSTHEVIAAVKGAGGVVVAAHAGDPQRNRRLLSDEQLDAMIADGLDGLEVWHRGNPPEQ RERLLTIAARHDLLVTGGSDWHGKGKPNGLGENLTDDDTVREILHRGVDLSDRVGSSHAA >gi|148337400|gb|DS264459.1| GENE 377 415053 - 415751 807 232 aa, chain + ## HITS:1 COG:ML1666 KEGG:ns NR:ns ## COG: ML1666 COG4243 # Protein_GI_number: 15827882 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium leprae # 46 170 30 149 214 73 28.0 3e-13 MSDFESQAAMDAADDETSVGTAVAMDDDYTKPRGWRHGATWTYLIMLLASAVALLVSFIL SADTLKMARNPGQKLNCDVNAVLSCSTVAESWQAEIVKFAGLSFPNAFFGIAAESVFVTI AVIGLSKVAVPRWFALCTWLGGLAALAYSYWLTTQSLFVINAMCPWCLVLMFSTTVQFMA LSHATVAVQDMPSGHAGLRKYYRLNFDLMVDVVWIVALIVVILVKDGPMLFA >gi|148337400|gb|DS264459.1| GENE 378 415840 - 416739 1253 299 aa, chain - ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 9 294 9 271 277 130 37.0 2e-30 MSIPSIVYKAHATGNDFVVYLDEDGTHEPTADEVRFLCDRHFGIGGDGLIRLAHPQAVSD VNERQIADCAAGDADWFMDYRNADGSLAEMCGNGTRAITLFAQRQGIADQPGGKPFHLGT RAGVKILTSLGDVPGLGKDVFQVEMGAWKRGDVDGYEVTIPGTSGSARGTFVDMGNPHVV AVLEDAFASLPNVEDLDLVTKPVVAPEIPSDQNVEFVRIDEQSEGDDAGEATMRVNERGC GETLSCGTGLCATAITLRAKTGIDHWTITVRGGTLRVDVTDEDVKLTGSATIVGKIELL >gi|148337400|gb|DS264459.1| GENE 379 416825 - 417601 869 258 aa, chain + ## HITS:1 COG:CAC3250 KEGG:ns NR:ns ## COG: CAC3250 COG0796 # Protein_GI_number: 15896495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Clostridium acetobutylicum # 6 257 7 255 256 202 43.0 5e-52 MASTAPIGVFDSGLGGISVAREIRRDMPNEHVLYFGDSANAPYGTKSPEQVRELSDVIVK RFVEQGVKAVVIACNTATSAAANELRDTYDIPIIGMEPALKVACDRGHGKRQHVIVAATP LTLRERKFAVLMDRFKADHTIFPEPCPGLVEIVEHGQLDDHDVVMRTLHQYFDQYDLSTI DSVVLGCTHFVFYRDYFRELLPDTAAIIDGNEGTVRHLGVVLESLGKLAPEDAEGSIDLA NSDTSARIAQLAQSLLDR >gi|148337400|gb|DS264459.1| GENE 380 417680 - 418528 975 282 aa, chain + ## HITS:1 COG:PM0638 KEGG:ns NR:ns ## COG: PM0638 COG4667 # Protein_GI_number: 15602503 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Pasteurella multocida # 4 280 2 278 280 140 32.0 4e-33 MANRTAMIDVGGGFRAIYGAGVMDRMLEDGIHVDHCYGVSAGSANMVSYISGQHGRNHTF YTQYAFRKEYASFDSYVKNHNYANLDYVYSTLSNHDGENPVDYEAFAANPTEFTVVACNA DDGSTKYFDKSDVGYDNYDIMKASSAVPVACEPYVIDGVPYYDGGIADPIPVQKAIDDGY DRIVVILTRPKDTVREQKKDIGPATILKRTHPEAAEKLMNRYQTYNDEVALAKEYEKDGR VLILAPESMYGLNTLSKSFEGLERMYRAGYAAAAAIPAFLES >gi|148337400|gb|DS264459.1| GENE 381 418666 - 419892 1184 408 aa, chain + ## HITS:1 COG:Cgl2256 KEGG:ns NR:ns ## COG: Cgl2256 COG1168 # Protein_GI_number: 19553506 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Corynebacterium glutamicum # 35 402 16 368 368 216 32.0 7e-56 MLERMEKQNRIFSGFDADAIDRTTAADLAEVGSDKWTRYPGCIGAFIAEMDYGLAPCIQQ AIDSACDHCKLGYIPEPWKRRVAEACAGWQKSHYGWDVDPDIIRVVPDVLEAYEIFLREL VGAGNAVVVPTPAYMPFLSVPKLYDVDVIEIEMLQGTDETTGEREWLFDFDAIEHAFAAG CHAFVLCNPHNPIGKVLTLAEEQRLCKLAERYDVRIFNDEIHAPFVFEGRHIPYPTISEA AARQSMTATSASKSFNIPGTKCAQVLLTNPADREMWAERAEWSEHQTATIGAIATTTAYN EGDPWFQDALSYVRRNLGLFDEQMRTRFSGVGYIRPRGTYIAWLDFGPLGIDDPAAYFLE KAKVALTDGRSCGRAGAGCARVNMAMPYPLLVDCLNRMHDALQADGLL >gi|148337400|gb|DS264459.1| GENE 382 419912 - 420154 65 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTDAMGGHTRHIAGKAAESLRLQRLRYGRIAACYDGRTPPSVDARRESSVCVSLRRRLYE YAIPLQRQRHMDTRLPLRFH >gi|148337400|gb|DS264459.1| GENE 383 420093 - 420638 646 181 aa, chain + ## HITS:1 COG:mlr5366 KEGG:ns NR:ns ## COG: mlr5366 COG3152 # Protein_GI_number: 13474473 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mesorhizobium loti # 19 111 3 97 117 62 37.0 6e-10 MRFPYSGNGTWTPDYHCGFIDAVKRFFIGYMEFRGRSSRREFWLAILFFIPVSVLIFLIP AAGTVSGILWMLATMVPIMAISFRRLHDANRTGWWFLLGHVGTILALAMLVIIAFGLVII EIGMIMVIPHEPPKLDFHNPNSFPGMLLTLFYVSLGMAGISLIIQAFLYSLPSKPEGVRF D >gi|148337400|gb|DS264459.1| GENE 384 420820 - 422469 2316 549 aa, chain + ## HITS:1 COG:Cgl1944 KEGG:ns NR:ns ## COG: Cgl1944 COG4166 # Protein_GI_number: 19553194 # Func_class: E Amino acid transport and metabolism # Function: ABC-type oligopeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 44 549 44 533 534 456 47.0 1e-128 MKRNMLHRLVAMAAAGTMLMSVAACGSSSDNNATTSNSSDTSLISVNNSEPQNGLIPSDT NEMGGGKVIRYLFEGLVSFDAKGKQHLEVAESITPNEDATKYTIKLKKGWKFTNGEAVTS HSFADTWSFAANVKNAQKTSSRFSTIKGYDELQDPNVDLKATLSGLSTPDDYTLVVELNK PDSVFPTKLAHQSMFPLPSVAFKDIKKFGQAPIGNGPYKFKSWSHDKNIIIVPNKDYKGS RKVSNNGIEYRVYTNEDSAYSDVLSGNLDVMDQIPQSAVKTFRQDSSVIAYSQAGSSFQS FVIPERLEHFGNDEEGQLRRQAISMAINRDQIVKKVYNNTKTPATDFTSPLVPEYVKKLE KNGDNLKYNASKAKELWKKANAIKPWSGNFRIAYNADGGHKEWVDAVCNQIKNTLDIDAA GEPYATFSDVRNQVTNRTIKTAFRAGWMLDYPSAEDYLNPLYASSSADGHGSNDGDYKSA EFDKLLNAALAQTDVKKRTEDFTKAQEVLAKDLPVIPLWNDNVAAASATNVKNVSFDYTN LPTYNTITK >gi|148337400|gb|DS264459.1| GENE 385 422605 - 423549 1089 314 aa, chain - ## HITS:1 COG:STM0847 KEGG:ns NR:ns ## COG: STM0847 COG1446 # Protein_GI_number: 16764209 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Salmonella typhimurium LT2 # 24 304 5 299 313 185 39.0 8e-47 MSTNEAALPQSTVRVAQADPDGILLVIHAGAGNRGKKDTPERRAQVEQDLNRALEAGYAL LEQGAPAEDAVCAAIRVMEDAPEFNAGRGAALTSEGIVSMDSCLMTGVDGEVGSACGLTT SKNPINVARAIKEKTKHVMFAKPGDNLLKEWGIELCDSEYFITPARQESLREAQSNGDEW EKHGTIGAVARDASGNIAAGTSTGGITNQMPGRVGDSPLPGCGTYANNDSVAISCTGIGE AFVKEVAAHQVSDRVLYAKEDPVEAAKAALDGVARHHGDGGMIVVPAHGDGAMVFNSEMM NCGWKSPKGSYVQS >gi|148337400|gb|DS264459.1| GENE 386 424048 - 424386 234 112 aa, chain + ## HITS:1 COG:no KEGG:BAD_1174 NR:ns ## KEGG: BAD_1174 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 112 1 112 112 209 100.0 2e-53 MRFQISQRRNMSAASILDSMVSVTSLNHGGASKALSQVGDNHPVVVLKNNQPSAVIITPA DYRRLTQAEENFALYRKAVERLRNDDSTLLTDADVFGEDYEPIDDGFEPEFE >gi|148337400|gb|DS264459.1| GENE 387 424468 - 425655 1097 395 aa, chain - ## HITS:1 COG:SMc01530 KEGG:ns NR:ns ## COG: SMc01530 COG3328 # Protein_GI_number: 15966161 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 24 390 26 389 398 216 35.0 5e-56 MPDSNIIQIDQNLFETKLDRLVTEKMPQILNAMLDAEADEITGAARYERKEGRKAYRAGH YERTLTAKAGRLELRVPKLKGAVFESAVIERYRRRESSVEEALMEMCLAGVSTRQVDDIS KLLWGDRMPSQTLSDKLKRVYDDIDRWRTRPLESEYPYVFMDGVWHKRSWGGSVENVSVL VAIGVNAEGHREVIGVTEGMREDAASWEQFIRSMIERGLKGVRLVVGDRCAGLVSTVNSM LPRAKYQRCMVHFMRNVLSKVPPNHRDWASAALKAIFAMESRESALAKAGTVAAEMESRK LKAAAGCLREGIGETTAYLLPEFPTEHRRRIRTNNMIERLNREIRRRTRVVGSFPDGNSA LMLICARTRYVTANEWSTRRYLDMSRLDDNLQEAN >gi|148337400|gb|DS264459.1| GENE 388 425970 - 426299 177 109 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAAFDRPEYDRYVRLAEMMISFLRDHGYNYDANLDQDILDHDGPGVPVENGVDAIIEFNL TPPKDMITLFGQVHDENPWCDEEYEQFRDYLREREDEHQSGKLIPPSAD >gi|148337400|gb|DS264459.1| GENE 389 426494 - 426703 85 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLRTIRLRSASAHMLARCKYNAGTRQIQIKSVQNFQPAKKPNGKPQATLVVWSNIHKLT DQTDICHVK >gi|148337400|gb|DS264459.1| GENE 390 426688 - 426915 103 75 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489009|ref|ZP_02029858.1| ## NR: gi|154489009|ref|ZP_02029858.1| hypothetical protein BIFADO_02319 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02319 [Bifidobacterium adolescentis L2-32] # 31 75 1 45 45 79 97.0 1e-13 MSCEVSDKSKNGSSKADHLNTRIPYGIRPVVKVRSYTLIVFQSTHPVWDATSPFSGCPTA ASFQSTHPVWDETTA >gi|148337400|gb|DS264459.1| GENE 391 427201 - 428001 766 266 aa, chain + ## HITS:1 COG:BH3998 KEGG:ns NR:ns ## COG: BH3998 COG4584 # Protein_GI_number: 15616560 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 2 175 28 203 499 114 38.0 2e-25 MDRATVAKYADMDDMTPKPPMDRRQGSKIDPYAALVDGWLEADRRPPRKQRHTAKRVHDR LRAETEYDGEYTTTPGYVRRWREANRRGSDGYGELVWAPGVAQIDFGVAKARIAGELVDD HCLVVTFPHSNMRYVTSLPGENAECLCHGLVEVFEHIGGVPPVIVMDNATGAGRRNARGE VTPAAVLDVFDIKKSLSHKGNPYDNAVVESTNRPLKKELVYRNHYTTIEQLRHDLNDYVW WSDNQRLHSTLGYRSPKEFTEQGLVL >gi|148337400|gb|DS264459.1| GENE 392 428035 - 428469 277 144 aa, chain + ## HITS:1 COG:RSc0248 KEGG:ns NR:ns ## COG: RSc0248 COG1484 # Protein_GI_number: 17544967 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Ralstonia solanacearum # 1 136 105 242 281 113 44.0 1e-25 MLYEPVGTGKTHLAVALGRLAYMRAIPVRFFTATGLLMMLRRAKREDRLDTELRQIARAR LLIIDEFGYMPIDKEGSRFLFQVISDSYETRSMAHIMNIEFSGWGRVLGDKNMAAALIDR TVHHGRLVRFEGGSYRSEHALMTR >gi|148337400|gb|DS264459.1| GENE 393 428484 - 428726 76 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADSDVAVSVGDQLPMLLKNSAYTVDANLQKHTRAPPRTRSGRFQSMLSVRRATPLLVRR LIMVDISIHALRKESDPTAR >gi|148337400|gb|DS264459.1| GENE 394 428813 - 429292 -259 159 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKYRGLSNRRTLLLSLSLRRAWIEMATSSRAGVIRSSRSPYGERGLKFDGDLTELAGGAG RSPYGERGLKFTAQGAYPVGSSRSPYGERGLKYRNYRNCAGFPCRSPYGERGLKLGVTVY AVVFGVSLFLRRAWIEMSLGSSYLTASLCRSPYGECGLK >gi|148337400|gb|DS264459.1| GENE 395 430610 - 431092 27 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489018|ref|ZP_02029867.1| ## NR: gi|154489018|ref|ZP_02029867.1| hypothetical protein BIFADO_02328 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02328 [Bifidobacterium adolescentis L2-32] # 1 160 20 179 179 272 100.0 7e-72 MSPCSAFQSTLSVRRATQRILDAGLAMEFQSTLSVRRATFTPTLDLAVSIFQSTLSVRRA THDGHSTVGGSIFQSTLSVRRATPEHPEGHARNMISIHALRKESDRLWNHHASHHQRFQS TLSVRRATGSPYFAIVQFVFQSTLSVRRATHADWQGMAPF >gi|148337400|gb|DS264459.1| GENE 396 432490 - 432945 -329 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489025|ref|ZP_02029874.1| ## NR: gi|154489025|ref|ZP_02029874.1| hypothetical protein BIFADO_02335 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02335 [Bifidobacterium adolescentis L2-32] # 1 151 1 151 151 253 100.0 3e-66 MIFQSTLSVRRATGVPSGDGERDVISIHALRKESDRPVAGSVPMSLRFQSTLSVRRATCD YINANTTQLFQSTLSVRRATTMVSVEPSPVQFQSTLSVRRATQMDGAIVRLVVISIHALR KESDNHGDTGLHRFHISIHALRKESDTRIHR >gi|148337400|gb|DS264459.1| GENE 397 436522 - 436812 231 96 aa, chain - ## HITS:1 COG:SPy1561 KEGG:ns NR:ns ## COG: SPy1561 COG1343 # Protein_GI_number: 15675453 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Streptococcus pyogenes M1 GAS # 1 87 1 87 97 101 56.0 3e-22 MMVVVAYDVSTETPEGKRRLRLVAKTCMKYGQRVQNSVFECSVSPSDYLVLVHDLLKIAN IDEDSLRFYKLGSRYADRIERYGRERSLPVNDVMMI >gi|148337400|gb|DS264459.1| GENE 398 436880 - 437650 187 256 aa, chain - ## HITS:1 COG:BH0341 KEGG:ns NR:ns ## COG: BH0341 COG1518 # Protein_GI_number: 15612904 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 256 88 343 343 304 55.0 9e-83 MLLRREQFRVADDEQKSLRYAKSFIVGKLYNAKWVLERTKRDHALRVNIDRLAEQSGKLS AALSKARKSLTIDELRGVEGLAAKDYFYAFDDLVLKNKDDFFFTSRSRRPPLDRLNALLS FCYSILTNDCIAALQGVGLDPYVGFMHTDRPGRASLALDLVEEFRPVLADRFVLTLVNTG AVKPGDFEIRENGGVLLSDFGRKKVLTAWQKKKSDQILHPFLQEKISWGLVPYVQALLLA RSLRGDLDDYPPFMWK >gi|148337400|gb|DS264459.1| GENE 399 437911 - 438588 206 225 aa, chain - ## HITS:1 COG:SPy1563 KEGG:ns NR:ns ## COG: SPy1563 COG1468 # Protein_GI_number: 15675455 # Func_class: L Replication, recombination and repair # Function: RecB family exonuclease # Organism: Streptococcus pyogenes M1 GAS # 7 220 3 217 224 186 44.0 3e-47 MKGPDGYSEEDWLALSGIQHFSFCKRQWALIHIEQLWSENYLTTAGHLEHERAHDYAASE SRGDMLIMRDLRVYSRALGITGACDVVEFHKSNDGVPLHGRDELWLPYPIEYKHGKSKTI DADRLQLCAEAMCLEEMLACDIPEGALFYQQTKRRERVKFDEDLRNMVEADFLQMHDLFS RGWTPKVKQTRSCSACSLRDLCLPELRKMKSAKAYIEERLKESGE >gi|148337400|gb|DS264459.1| GENE 400 438623 - 439468 535 281 aa, chain - ## HITS:1 COG:BH0339 KEGG:ns NR:ns ## COG: BH0339 COG3649 # Protein_GI_number: 15612902 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein predicted to be involved in DNA repair # Organism: Bacillus halodurans # 1 281 1 283 283 278 57.0 6e-75 MAALENKIDFAIAFAVNNANPNGDPLNGNRPRTTSEGLGEVSDVALKRKIRNRLQDAGES VFVQSDDRSDDGAKSLSDRFNTYLKTLPKDEQKQKNVVFGKVCERWLDVRSFGQVFAFKK AKDTDEVSIGVRGPVSIQPAFSINPIAIDDVQITKSVNSETTDSGKKSSDTMGMKYRVSG RAVYVTYGSISPQLAERTGFSAEDAEKIKEALVTLFENDESSARPSGSMEVLDVVWFAHN CKGGQYSSAKVHRSVSVDADGTVNVDDASIPGLRYEVIEGR >gi|148337400|gb|DS264459.1| GENE 401 439706 - 439819 65 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNIFSIHIALGAMTVGIHGEALYDVGHIVEAAYAIP >gi|148337400|gb|DS264459.1| GENE 402 439890 - 442307 352 805 aa, chain - ## HITS:1 COG:BH0336 KEGG:ns NR:ns ## COG: BH0336 COG1203 # Protein_GI_number: 15612899 # Func_class: R General function prediction only # Function: Predicted helicases # Organism: Bacillus halodurans # 14 794 14 787 800 374 31.0 1e-103 MVLLARKDEEGNTQALYDHLHGAGRLASGFEDEFADISRTAAVLHDVGKVAQQFQTYLLS DDGHRGDVQHARQGAFVVNVFFESKGEIEEIAKEILELAISKHHGGLPDCIDESGNRAFL LGFTESDKSNEKYAYQEIKRGLNGLALDLQSNFRGSAEDIACFLKKIKSLRLSKDSIYFY LGLLVKLIYSRLVDADRTDAACFETRKQYRPNAVDWQNLISRLDKSMRSFDSSSEINRIR HQINEQCCLAGARETGIYRLSIPTGGGKTLASLNFALHHALKTGKRRIIYVIPYLSITTQ TAKTFRDVLGLNSDSDVLLEHYSTAGMQRSADVADNASSEFEDAGEHQRKLAAERWDNPI IVTTMVEFLETVMSARGTKLRKFHNMADSVIIFDEIQSLPMNTINLFNEIVSFLSKITNS TILLCSATQPLLEKTKRENLLLSEKPDLIAETESYEDKLRRTRIVASAENKSCDELGQII YQQARKSGNCLAIVNLKKEAREIFQCLERLDVNHEFELIHLSTAMCGRHRTDCLNRIGAL LDPGNPKPVICVSTQLIEAGVDISFACVVRAMAGLDSIMQAAGRCNRNGESVEPKNVYVY PLKDEDSMERYLPDIAMGKQLTLQIMENYPGKDLLSSNILEQYYDMLLRKKDGNGKGGYT DCPIRGRAEGATTAYDLLSFNECDRSQFTNTTGGKYGLCFAQAFQTVSDNFHVIPDVTHN VVVPYGQATELLDMLHRGELPEKISVLRRLQEYTVSLFDDDYRGLARKHAISLANEDFGV FLLNEEYYNDKYGVVREAEMPLLLM >gi|148337400|gb|DS264459.1| GENE 403 442556 - 445861 4438 1101 aa, chain - ## HITS:1 COG:MT1587 KEGG:ns NR:ns ## COG: MT1587 COG0060 # Protein_GI_number: 15841003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 5 1097 2 1039 1041 1115 52.0 0 MSESTNHVYPKAAAGEQSANVAPNPSFPKLEESVLDYWDKDGTFQKSIERRPSGDHSQNE FVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGHRVNRVFGWDTHGLPAELEAQKEL GIDSVDQIKELGIDKFNDACRASVLKYTNEWKDYVHRQARWVDFEHGYKTLNITYMESVM WAFKQLYDKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKLRDEED AYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTEGKFAGKKFYLGKPLLGSYEKELGENY EIVRELKGAEMEGWRYYPVFPYFAGDENAAEGKVPGPEGYQIFTADYVDTVEGTGLVHQA PYGEDDMNTLNAKGIKSVDVLDAGCKFTSLCPDYEGMYVFDANKPILRNLRAGDGPLARI PEEQRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVAVTKIKDRLLELNQQINWIPNN VKDGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLDELKADFGDYPRD HEGNINMHRPYIDELTRVNPDDPTGKSHMHRISDVMDCWFESGSMSFAQYHYPFENKETF EQHFPCDYIVEYIGQTRGWFYVQHVMATALFDRPAFKNVICHGIVLGSDGQKMSKHLRNY PDVNGVFNDFGSDAMRWFLMSSPILRGGNLIVTADGIRDTVRQVMLPVWSSYYFFTLYAN AAGYDARMLRADEVAKLPEMDRYLLARLRRLVEKTQHALDNFYISDACDAASDFIDVLTN WYIRNNRERFGAGDENAFNTLYTVLETFMRVLAPLAPMEAEAVWRGLTGGESVHLADWPF LADEKTGETTELGAVLQDDAKLVDAMEKVREVVSGTLSMRKAKQIRVRQPLAKLTVVVEN PDAVAAYSDVLKGELNVKDIEFCTLEDAGSHGLKIVNELRVNARVAGKRLRKDVQFAIKA SKSGAWHVDAAGVPVCETPNGEIALEEGEYELINRVEEENAQEAANSVSAALPTGGFVIL DTELNDDLLAEGYARDVIRAVQEARKAAGLEISDRITLKVTVPADDVAKVEQFKDLVAHD TSSDSVSVEAGAELGVEVAKV >gi|148337400|gb|DS264459.1| GENE 404 446239 - 447711 2159 490 aa, chain - ## HITS:1 COG:STM4299 KEGG:ns NR:ns ## COG: STM4299 COG2211 # Protein_GI_number: 16767549 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Salmonella typhimurium LT2 # 24 475 4 439 476 119 22.0 1e-26 MAESNVAAAPKETQQSAKPTRKGSLLSRVAYSFGNVGQSAFYNALSTYFIVYVTSSLFSG VDKALATKLIGVITGLVVVIRIAEIFIDPLLGNIIDNTKTKWGRFKPWQLIGGTVSAVLL VLVYTGLFGLVNVNTTLFIVLFVITFIVLDVFYSLRDISYWGMIPALSSDSHERSTYTAL GSFGGSIGYNGLTIVVIPIVTYFSYIFTGKHQESQSGWTCFAIIVAILGVLTVCSVAFGT KESTSTLRAKAEDNGGPLAAFKALAQNDQLLWVALSYLLYAIANVATTGVLMYMFKFILN NSAAYSIVGVVSVIAGIIMAPLYPILNKRIPRRYLYLGGMVLMVLGYLLFIVGTNNLAVV TVGLVFFYLPQTFIQMTAILSLTDSIEYGQLKNGKRNEAVTLSVRPMLDKIAGACSNGIV GAVAIAAGMIGDATAADMTAANIHTFKVCAFYVPLAVIILSGVVFLLKVKISEKMHADIV EQLETQLNEG >gi|148337400|gb|DS264459.1| GENE 405 447981 - 449090 676 369 aa, chain - ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 11 341 1 328 330 202 37.0 1e-51 MRHPWEGEGAMATIKEIAKRTGFSQATVSRLLNGDPTLSVREETRRAIIRASEDLGYSAQ AKRIVIPHEVALLDNEESDETLRDSYFADLRSALEHNAKQQRMELTVFHSLDEMLNQKGK FDGFMAIGANVIAESDLEKLHEVMPYGVFIDVNPAPNLFDSVQPDLQQTVHDAVEACAKA GMKRVGFIGGKGRLTNFYEVDEEGRATYFRREMGRYGLDLRGLVYSDGLFTVENGRKLGE QFIRDHNGALPDAVIVSADIIAVGVLQAFNAVGVIVPRDISVISINNQTIAQLTSPPLST FAIDQNELARVAILTLADAIASKRTVRQHAYLSTTLEVRDSFVPAQPKRESRPKLQTRSK RSARSKRAA >gi|148337400|gb|DS264459.1| GENE 406 449082 - 449348 152 88 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489048|ref|ZP_02029897.1| ## NR: gi|154489048|ref|ZP_02029897.1| hypothetical protein BIFADO_02358 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02358 [Bifidobacterium adolescentis L2-32] # 25 88 1 64 64 101 100.0 2e-20 MPHQILVKALLNPSYYITERILIAMTQPEQSRKPRIAHQSTERMNELRAQQKSFALQNMR SKGLGNAGLPFKATGHKGGISRQGSKRG >gi|148337400|gb|DS264459.1| GENE 407 449842 - 450447 462 201 aa, chain + ## HITS:1 COG:no KEGG:BAD_1190 NR:ns ## KEGG: BAD_1190 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 201 207 407 407 410 98.0 1e-113 MKFHYARHGVDVVHADELVSSVSAMQAVCQIAPYVDERSLVIAMDWLTCANPDLRVCTHD ELSDYIRSAPRFIGSAKCRKALRLSKPGTDSPQETVLRLESDAYGLPEAHVNYEIIDHIR GSGTMKVDIAYPDDRVCIEYDGNYHYTHDRWMYDLDKRNRLRDLGFTPFVATREHLASKQ KLNELFGMVARAIASHRYGLD >gi|148337400|gb|DS264459.1| GENE 408 450632 - 450853 100 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKSHSGRTLRKRSCPPIHGSHMRKGRAEATYVASARPLHSLNTTVQPVQFTKNGTGTKQK EPYSSSTAPVYSW >gi|148337400|gb|DS264459.1| GENE 409 450817 - 452895 180 692 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 455 678 132 355 398 73 27 1e-11 MSATTNKKTAQGMHPQEGNKAKRPDAVPHGGPKVPQKAAPGTTKRIFGYIFQYKWHVVAI VLCILIGAAAQAGSALFLQSLIDSYILPLVGVKNPDWNPLLRALTLMACLYAAGTFCSWL WQWLIVTVEQGTLKKIRDDMFAHQQTLPIRYFDTNEHGDIMSRYTNDTDTLRQAISQSFP QMFSSAISALAALVSMLWLSVPVTIFVLVFAAILFVVVRAIVSRSGRYFVKQQMWIGDVN AFVEESVNGQKVIKVFNHEDATQKTFDEKNEELFHASAEANTWGNVTMPVVGNMGYILYI LLAIVGGFMALSGMGNFGLAGAGKLTLGALISLLTLSRSFVNPLGQVSMQFNMVMMALAG ASRIFQLMDEKPEDDGGSVTLVNVELGEDGRTMTEVDHETGHWAWKREEGDDGTRSLKAA QSLSPKAAEVARKARENAITSPDGRLTLLQGDVRFTDVTFGYNPDKPVLHDITWFAKPGQ KVALVGATGAGKTTVTNLINRFYDIQEGMILYDGISVKGIRKPDLRKSLGIVLQDVNLFT GTVMDNIRYGKLDATDEECIAAAKLTNADSFIRMLPNGYQTVLEGDGSGLSQGQRQLISI ARAAVADPPAMILDEATSSIDTRTEEVVQAGMDNLMKGRTVFVIAHRLSTVRNSDVIMVL DHGRIIERGSHDELIAQKGEYYQLYTGAVELE >gi|148337400|gb|DS264459.1| GENE 410 452910 - 454730 195 606 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 376 581 38 249 329 79 30 2e-13 MSGTNVTTAAVQSQPKQKRHLVRTLGKSLREYRKPSILTPIFVVIEGVLEILIPTVMASL IDEGITGKSMPAIVKFGLILLACSLCSLAAGFLAGKFAAIAGAGFAKNLRHDEFEKVQGF SFTNIDRFSTGSIITRLTTDVTNLQNAYSMIIRLGVRAPIMMIVAWIFSFRISPSISLVF LACIPVLAFGLCGLAVYVHPVFERVFHTYDKLNNVVDENLQGIRVVKSYTRESHEIAKFG RISQRIYKDFSKADRVMSFNNPLMMVCVYVSMILIAWMGAKQIVASGNNAALGLTTGDLT ALVTYAMQILMAMMMLSMVFVMCIISQASAERICQVLNEESTVTNPANPIKEVADGSIEF DNVDFRYSDNSEKPVLDNINLKIRSGMTVGIVGGTGSAKSSLVQLVPRLYDVTSGSLKVG GVDVRDYDMEVLRDQVAMVLQKNVLFSGTIAENLRWGNPNATDEEIRHACQLAQADGFIQ EFPDKYDTYIEQGGTNVSGGQRQRLCIARALLKKPKILILDDSTSAVDTKTDKLIREAFH NEIPDTTKIIIAQRIASVQESDMILVMEEGRITASGTHEELLRTCDEYRSIYESQTKNQA QPEELQ >gi|148337400|gb|DS264459.1| GENE 411 454731 - 455408 627 225 aa, chain - ## HITS:1 COG:CAC3413 KEGG:ns NR:ns ## COG: CAC3413 COG1846 # Protein_GI_number: 15896654 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 45 177 11 142 143 70 35.0 3e-12 MQLLYVQRVIVCSVNDIQNDGTASVNPAFTEAWDRGACKPPSVAIRSLHNVINRYLAVTR PMEVDSLSGGNIDIITFLARHSEREIFPQDVERRFGITRSTSSRVLALMERKGLIVRESV PRDARLKKIVLTDKSRDIAEALRANAVAMEGILLQGLSDDEIREFMHVLDVMQTNLVSTG LIGDESRYSSLALCEAESRERQSRECESQPTVRKTSQEDETGKEE >gi|148337400|gb|DS264459.1| GENE 412 455636 - 457891 2975 751 aa, chain - ## HITS:1 COG:YPO2803 KEGG:ns NR:ns ## COG: YPO2803 COG1472 # Protein_GI_number: 16123001 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Yersinia pestis # 7 673 32 723 793 451 38.0 1e-126 MSDTAYPSVNDLTLEEKASLTSGGDAWHLQGVESKGIPGYMITDGPHGLRKSLASSTGET DLNDSVPATCFPPAAGLSSSWNPELIHKVGEAMAEECIQEKVAVILGPGVNIKRNPLGGR CFEYWSEDPYLAGHEAVGIVAGVQSKGVGTSLKHFAANNQETDRLRVSANISQRALREIY FPAFEHIVKTAQPWTIMCSYNRINGVHSAQNRWLLTDVLRDEWGYEGIVMSDWGADHDRV ASLNAGLNLEMPPSYTDDQIVYAARDGRIQPEQLDRMAQGMVDLVNKTRSAMSIDDYHFD VDAHDEVAHQAAIESMVLLKNDDDILPVAANAKIAVIGEFARTPRYQGGGSSHITPTKMT SFLDTLAARGVDVAFAPGFTLDLEPADRTLEAEAVETAKNADVVLMFLGLPEAAESEGFD RETLDIPAKQVELLKAVAAENKNIVVVLSNGSVVSVAPWAGNAKGILESWLLGQSGGPAL ADVIFGKVSPSGKLAQTIPMDINDDPSMINWPGEEGHVDYGEGVFVGYRYYDTYDKAVDY PFGFGLSYATFAIDGVNVAKTGANTAHVTATVTNTSDVDAAETVQVYVAPGKASVARPKH ELKGFRKVFLKAGESAEISFDLDERAFAYWSEKFNDWHVEAGEYTVEVGTSSRDIAAVAV VTLDGDGKALPLDEWSTFGEWSCDPVGSKIVASVYAEGEAGNLPQLPDNDMMRMFLKSMP INSMPMLMSDGGKAITAFMLDEYAKIAETAE >gi|148337400|gb|DS264459.1| GENE 413 458124 - 458702 870 192 aa, chain + ## HITS:1 COG:no KEGG:BDP_1658 NR:ns ## KEGG: BDP_1658 # Name: not_defined # Def: TetR family transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 1 192 1 192 192 352 88.0 5e-96 MANDEVDRRSAILNAAVECFGTLGYYGTSLQRIATMVNLTKPGVLHYVGSKEGLLHAVLD EMYDRETEDVTAGMVRDERPLIAEMWRRTVAVNAKRPELVHMFSTLSAEALNPDHPAHDY FAEREEHIVEVAANIRWHVPEGVDAEQVLRSGFAMMDGAQLRWLRVPGRDLNEMWASCED VLFPLPQWEGYR >gi|148337400|gb|DS264459.1| GENE 414 458705 - 459904 1164 399 aa, chain + ## HITS:1 COG:L79277 KEGG:ns NR:ns ## COG: L79277 COG1929 # Protein_GI_number: 15672838 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Lactococcus lactis # 2 392 4 381 385 275 43.0 1e-73 MKYLLAPDSFKEAASAQAVAESMRRGVAAGDPGAECRMMPLSDGGEGLTDALVQATGGEL RSEHAHDALGRPIITRYGFLGEGGFGTSHDGENPRTAVVELAAASGIERISPADRDPLAA STFGTGELIRAAIDAGAERIVLGLGGSATTDGGTGLARALGHRFLDADDCELPLGGGALP RLARIDDTEVPDDVRNIPIVLACDVTNPLTGTDGAAAVFAPQKGANTEQAALLDCGLGRL ADAITALNGRKITDKPGAGAAGGTGGGMLGLFNATMRPGIELVLDLLHAREACAWADVVI TGEGSIDGQTPYGKVPSGIARLAKSQGKPVIAIGGKVTRDPNVTAALNEAGIVATFGIAP GPAALPELLADTERNVEATCAAIAGLLSVARECSSRPHQ >gi|148337400|gb|DS264459.1| GENE 415 460174 - 461628 1631 484 aa, chain - ## HITS:1 COG:BS_lmrB KEGG:ns NR:ns ## COG: BS_lmrB COG0477 # Protein_GI_number: 16077336 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 33 434 18 424 479 253 40.0 6e-67 MTEREQRREQPAKAMREGPQPSRYMSEGRLTIVVVALAILTFLGILSETSLNIAYSTLMG EFAISADVVQWLTTGYLLLLSIAIPTSPFMVRTFPAKGLFVTAVALFSAGTVVGALAVNF PMLLAARLIMALGTGVSLPLLTNIILEKAPFDRRGMMLGLVSLVTCAAPAIGPVFGGLVM EFLNWHWIFYTMIPFLILSLVLGCATVPDIRHGGKGYLSVPSLILVAIGLAGIIVAVSFF AQWNGDWRFWTVLAGVIVVLGVFAAVQLKMEHPLVEVRTFAFPGFTLGMLILLMSSGGVL GVNFLLPILLQRGLGHTSMIAALILLPGAVVGAISAPLIGGALKAHFPPKFIACGFVGVA IMDIVMMLGGAHEWAVAIAYALFMAASGFVLVPDQTHALNQLPAAMNADGSAMMNTVQQL AGAIGTAVASTLIAEFSAANRAAGMKSAAAYVAGFSASMWVFFGMAVTGEILSLLMFRFS KRAA >gi|148337400|gb|DS264459.1| GENE 416 461699 - 462277 395 192 aa, chain - ## HITS:1 COG:no KEGG:BDP_1666 NR:ns ## KEGG: BDP_1666 # Name: not_defined # Def: MarR-type transcriptional regulator # Organism: B.dentium # Pathway: not_defined # 40 192 1 153 153 253 88.0 4e-66 MVESRSGQRQLSLDDVRDLIDVCWMAKRITEALPELPKNMKPRHVHVIDAIWNLNHRAGS PAPAARVSGISAFLGVTAPSITKLVNELVVKGLVVKHASEADGRAVTLSLTEAAEEIREL YVHQFHEHLRGVLSGISPQDVATTVATLQAMHRLMDTDRGGEWTTKVADAWPARVETLMA GGDPRSHTAEKR >gi|148337400|gb|DS264459.1| GENE 417 462461 - 463048 801 195 aa, chain - ## HITS:1 COG:CAC0694 KEGG:ns NR:ns ## COG: CAC0694 COG2211 # Protein_GI_number: 15893982 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Clostridium acetobutylicum # 1 194 251 445 449 91 29.0 7e-19 MAAYVAKYVLGNSNLIAVIGLATVIPMVIGLPFAGPLVARFGKRNASMAGLVLVAVGSLL VFVDPSNLWVFFVSIIVRMVGIIPMNAALNAMSGDVVEYGEWRSGVRSDGIVFSSSSFSM KVAMGVSSAAIAWILGASGYDGSLAVRSDATVSAMVNTFVWVPVAMVVVMAALLFFYDLD KRVDRVGGELAARRV >gi|148337400|gb|DS264459.1| GENE 418 463194 - 464534 1756 446 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 87 446 55 418 418 134 26.0 5e-31 MRIREGEPVTERDHHGDRPEEDAPAEGRTAEELTPDTGKPVSKLNLGRFGAGFIFFCIVF MMSGTIGSTVLLPARFNTLGIGQGETILGTMNSIGIIFALISNVIFGSLSDASHSRFGKR TPWIIIGGPIAGIGFYLTSISPTLPTIVASWSLLQISLNCMIAPCVAILSDRVPQKYRGS MSAFYGAGQIVGQSMGTIIGSAFIDAPKTGFMIDTICWCLCGIGTVLLLPRELSAATADA ERFDIRQIAMQFRPPTKGARDFYLALVGRLMLIFGYNMIVGYQLYVCMKYIGQDAKAAAS TVSTMAVITMVVPLVVPLVSGPISDRIGKRKLPVFVSSTIIAIGIAVPWVLKSQFSMFVY AALMGLGYGIYMVVDQALNVDVLPNPNEAGKALGILNLANTLGQVIAPIVVSSIVVATGG YFLVFPIAIAAVTIGAVVILFIKKVK >gi|148337400|gb|DS264459.1| GENE 419 465023 - 467353 2940 776 aa, chain + ## HITS:1 COG:TM0076 KEGG:ns NR:ns ## COG: TM0076 COG1472 # Protein_GI_number: 15642851 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Thermotoga maritima # 9 775 4 758 778 423 35.0 1e-118 MTNTTDLPYKNPNLPAEERITDLLGRMTLEEKVGQMMQLDARSGDLDDLIVNKHVGSILH TSPADLPRAVETVNTKTRLGIPLIIGDDCIHGYSFWPGSTIFPSQLGMATSFDPAKVQAA GRATAEEVSTTGVHWTFSPVLCIARDTRWGRVDETFGEDPYLIGEMASAIVKGYQGGAKA GEPLAKDAILACAKHFAGYSETQGGRDASEADLSHRKLESWFLPPFERVAKEGCGTFMLG YESIDGVPVTFNKWLLSDKLRGDWNYQGTLITDWDNVGRAVWEQKVKADYVQAAADAVKA GNDLIMTTPKFYEGAIEAVKTGLLDESLIDEAVSRILALKFRLGLFEDPRLPDQERIKTV IGSKAHQELNLQIARESVALLKNDGALPFSAAAGKRIAVVGPLADDAQEQLGDWAGNSGQ VNWMPEGQPRGMITTILDGFKQLAPEGCEVAYSRGANIIDLVDDPEGEFYPDGQPRPKLA VSAKFDQQLLDEAVENARRSDLVVAVVGDVVQLVGETCSTATLELLGGQNAMLEALADVA RETGKPLVVVLMSSKPQVMPACVIGTNGVIVDESTADGVSAFMWAPNPGMKGGQAIAEII LGETEPSGRLPITFPRHAGQLPVYYNQIRGQHGNRYADLTQDPAFAFGEGLGYTTFAYGE PTITNVPASGTFATTDTMHVEVALTNTGERKGTEVAQLYIGDIVTSYSWTDRELKAFQRV ELEPGETKTVTFDIPVSECTIVDSDANRIVEPGEFEVLIGHSSRRRDLKRTTFTVA >gi|148337400|gb|DS264459.1| GENE 420 467807 - 468442 805 211 aa, chain - ## HITS:1 COG:no KEGG:BAD_1201 NR:ns ## KEGG: BAD_1201 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 211 1 211 211 395 93.0 1e-109 MAEEETSKRTRKSPQERRAEVLDAAVQLISERGFNGISIQDVADRVGISKQGVLRYVENK DKMLALVYDEYYGQTGTPEDFFSSGMPGSDPSAPHFPAYLRYLVKHNSRRRMMVQLFTVL SAESLNPDHPLHDEFMERMDNIWAHYSRYPWLVPPQLGAWADSMRPVVRKAMEIMDGIQL WWLREPEVDLCAEWAEMENLLFPEPLWDAYR >gi|148337400|gb|DS264459.1| GENE 421 468453 - 469691 700 412 aa, chain - ## HITS:1 COG:SPBC1105.05 KEGG:ns NR:ns ## COG: SPBC1105.05 COG2730 # Protein_GI_number: 19113253 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Schizosaccharomyces pombe # 7 259 37 275 407 125 32.0 2e-28 MVLGIDERINGVNLGNWLVLEKWMDPEPFVRTAEDDEIWMHRTHGALWSERNLAEELRRH RDAYITLEDFRIIADHGLNLVRIPVPYFIFGDWPGHPGCVAYLDRAFRWARETGLKIMID LHTVPGSQNGFDNGGLTGVCKWAQNPDLVEYALNVLERLARRYRDEPTLHSIEVLNEPVS WSVFHGTSNTAKDVREASGSTHVPLRFLKRFYCDAYTRLRAILRPETIIVFHDGFRLLRW GDWFRRAGMRNVMLDTHQYLIAMEEPLFAGPARRLYLQSRHLPWLYRMLVGAREIAIRSA ARHIPVLVGEWCVENRWAPRSRNRADAYRQVSRLQRAAWDASAGQVYWSYQLARSAKPGS GEGKPPRDPRNGGNLEAWDLTRVWRHGWIQADAPHDDVASAPSINGNRSKGH >gi|148337400|gb|DS264459.1| GENE 422 469912 - 470781 1184 289 aa, chain - ## HITS:1 COG:SPBC1105.05 KEGG:ns NR:ns ## COG: SPBC1105.05 COG2730 # Protein_GI_number: 19113253 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Schizosaccharomyces pombe # 2 252 161 374 407 59 26.0 7e-09 MSQNGFDNGGISGVCKWAQLPDEVEFVLSVLERLAKRYGHRQALMGIEIINEPNTTTSWP MMNVTERYKAVDPELAEGTGPIAFDWLKDFYVTAYHRLRDADKGALPTDKAVVFHDGFDI EQWKGFMRGSDGRLAPEFENVVLDTHQYLMTAEMMGCPQTVEGYDDFVRNTYAPMIAEMS EYFPVIVGEWCLFNSVGCGVDTHGGQSVLNGEEGAQAETLTAEQKRSLYQGVAESQLAAW SKGSGFYYWNYKLLTDTMVGVAVTDAALHEKTADFDFFDYEADETKPVD >gi|148337400|gb|DS264459.1| GENE 423 470830 - 471156 614 108 aa, chain - ## HITS:1 COG:YLR300w KEGG:ns NR:ns ## COG: YLR300w COG2730 # Protein_GI_number: 6323331 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Saccharomyces cerevisiae # 13 106 53 159 448 63 34.0 6e-11 MTYEGVHMNPDYIKGVNLGNWLVLEKWMNPALFDGTTADDEYYLPTQLDPAVYEARIKTH RAEYINERDSATIKSWGLNSVRIPVPYFIFGDRAPFIGCIDELDKAFN >gi|148337400|gb|DS264459.1| GENE 424 471186 - 471464 68 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154489071|ref|ZP_02029920.1| ## NR: gi|154489071|ref|ZP_02029920.1| hypothetical protein BIFADO_02381 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02381 [Bifidobacterium adolescentis L2-32] # 26 92 1 67 67 129 98.0 6e-29 MYLGVSVSKFLIGVLSCGNRRHGEVVRSFSAGLQPLAVGCLELQQRSVEDPHHVSHSGTS INRSYIFKYKGRWRRWGAAEVGLRVGRKCIRL >gi|148337400|gb|DS264459.1| GENE 425 471430 - 471501 96 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRNFETDTPKYIKTKHPYIWTYQ >gi|148337400|gb|DS264459.1| GENE 426 471571 - 472809 694 412 aa, chain + ## HITS:1 COG:no KEGG:BAD_1199 NR:ns ## KEGG: BAD_1199 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 411 1 411 412 644 90.0 0 MEKPSDSKNSSISVNYFLNSAAYSGLFSLLSVILTGQVSATSSLCVGLALGVLSLFSRGS TVFIGGLIERSSTVSLTETGFGFIVFSLLLLQPAMGGFIGFLFLDLALLGLGLSLVNFAL RGHIIARVKDKKSQAALFALVTMTANLGSAIGPLASNYIYKAFGQTLFVIVIVGLYVFSA LLTPIVLTHHVFIRNEKSSKENTSSIVKTITDSLKSPGTVLAILAVFVGSIMNGQLFAGM ALEFHSLSDSPVIRGLFYSIDAISVIALQMPVSKLISRGMANGQNATSFIIKSLGIYGIS FALFACGVSSYWWICIIALVVFSIAECIYAPLINIALVEAQPDKPLVDILNYRLIIAAIG ESAGSFLGGWIVPALRPAGMTAWYWCALALVGIIPAVVSNQIGKRGKRIIRR >gi|148337400|gb|DS264459.1| GENE 427 472847 - 474022 536 391 aa, chain + ## HITS:1 COG:no KEGG:BAD_1200 NR:ns ## KEGG: BAD_1200 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 390 1 390 395 728 90.0 0 MKILLLQQPKSFSDYPEWIKEVQERFGRLEVMVFTSDNRAVHHRWPNTVIKEIVVSDYSS DSATAKFFDIVRKFKPDRIISSSEEDVLRVAEARSLFGIPGLQYELALRCRDKVTMKQSA LDAGLQVIPYTSCKSFGDIISAFDRWETVVLKPRWGAGSAGITILHSKDDLPALATKPEF IQNVHSNQYYLEEYCSGSVYHVDVVYINADSILISPSRYLVPPLDFEKQNTGSVMLDEDD ADYSELLRLTKQLIRSFKDQTIPNVMHIEFYKNETGDFIFGEMAARRGGGLIKQELTAAY GMDQSKANFLLELGLVDADTNITRLSQYGILLETAGLNCPKEKEIPDWAVLESVGKKKGI AHNSVDSDRKFLISGDNEAEIIQRSNHLIHG >gi|148337400|gb|DS264459.1| GENE 428 474213 - 475559 2142 448 aa, chain - ## HITS:1 COG:CC1757 KEGG:ns NR:ns ## COG: CC1757 COG5520 # Protein_GI_number: 16126001 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: O-Glycosyl hydrolase # Organism: Caulobacter vibrioides # 1 446 25 468 469 166 27.0 1e-40 MTTWIATTQDDKLADRTSDIESTNATTAADVQLDGNEYQALRGFGGCFNELGWLPLQNVS EAERDQIIKELFSPDEMNFTFNRAPVGANDFADHWYSYDEVDGDYEMEHFSVEHDEQTLI PYIHRAQEWQPNMQLFSSPWSPPTWMKRPKAYNYGRLVQTPENLKAYAKYFVKYIQAYAE HGITVNQLHVQNEVFADQKFPSALWDSEALKVFIRDYLGPAFDEAGLSTDIWLGTLNGPE DMAWTGGGYGMTLNNYNRFVDNILFDDGARKYIKGIAYQWAGQNCIARTHESWPEIELIQ SESECGTGDNSWEYAEYIFHLINHYFRNGATAYTYWNMILDDQDSTWGWWQNSLFTITAD THEVRRNPEYYVMRHFSHFVRPGAKVLGTTGHFNSMAIAFRNPDGTVVVVAQNALDEERP FAFADPDAAERGFKVTLAPRSFNTFVLD >gi|148337400|gb|DS264459.1| GENE 429 475615 - 475776 56 53 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGGAIRSRGGETAYGTTVSPGLQQLPYLTFLMAMMKKQPMMANAMDVGNAKL >gi|148337400|gb|DS264459.1| GENE 430 475695 - 477020 1982 441 aa, chain - ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 86 441 59 418 418 115 28.0 2e-25 MSEAIASKAERLAAYNANIAAAEKDPSLSPETGKPLSKMNAARFGAGFLVFGVLWMSGLG IVSAVLLPMHYKTIPGVNADALVGIVNAFTAVASLVANLMFGNFSDRSRSRFGRRTPWIL FGAVLGGVTLFLTGTTHNAVLLTIFYCACMFGLNCMIAPMVAILSDRVPSKIRGTMSAFY GAGSTIGAPIGTMLGALFIENLIPGFAVAGVLMFLGGVVAVIIIPKEQSADFLPKDEGSA KDILSSFRPPKFSTAHDFYKAFAGRFCMLMAYQMINVYQLYIIQNYIGQSVKESAVTVSV VSMIMMVMSLVGSFISGPVSDLIGRRKVPVVVASVLFAVGIAMPWIFKSTMGMYLFAGIA GLGYAVYSAVDQALLVDVLPNKEEAGKDLGILNMATTLGQMCGPVVMSAIVVNLGYNFAF PTSIALAIIGCFFIMAIKKVK >gi|148337400|gb|DS264459.1| GENE 431 477436 - 478026 766 196 aa, chain + ## HITS:1 COG:no KEGG:BAD_1210 NR:ns ## KEGG: BAD_1210 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 196 13 208 208 371 94.0 1e-102 MSAEDRRKAILETTVSFISQFGFWGFTIRDVAQAQNITEAGLLYYFKSKEQLLEETLKYA DRTNQIAIAEHLGVQGVTGEVLDDSIAYHCDLGLKAISTGTVETNADRPEMVRLYTLLES EALSKDHPVHEYFEQREINLLKEYAFAAERDGVADPERTALQVLSAMEGLQLRWLNGSHD VDFVGEWKAIIDLLIP >gi|148337400|gb|DS264459.1| GENE 432 478062 - 480188 2684 708 aa, chain - ## HITS:1 COG:TM1195 KEGG:ns NR:ns ## COG: TM1195 COG1874 # Protein_GI_number: 15643951 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Thermotoga maritima # 10 486 1 477 649 209 29.0 2e-53 MGRYEADHILFGAAYYDEYLMMKGIDRIDEDMAMMKDAGLNVIRIAESTWSTCEPQPGVF DFTYVDRALDAAQRAGIDVIVGTPTYAVPSWLVKLDPSVLAVTPNGQGKYGARQIMDIVN ATYRFYGERVIRKLISHVADHPAVIGYQVDNETKYYDSVSEDMQRLFVKYLREKFHGDLD ELNHHFGLDYWSNRIDSWEDFPDVTATINESLGGEFDKFRRDQVRAFLQWQADIVREYAH DDQFITHNFDFEWRGYSYGVQPAVDHFKASTAVDITGVDIYHPTEDDLTGREIAFGGDMT RSTKDGRNYLVLETEAQGQHGWVPFPGQLRLQAYSHLASGADMVEYWHWHSIHNSFETYW KGLLSHDLEPNPTYREAGVFGREIAKPEVGERLVHLKKHNKVAIMVSNESLTALDWFLIE AGFPFGGTLKYNDVVRNIYDALFELNVECDFIPSDAPAERLAKYEMIVTPALYCTPQETT DRLREFVSSGGHLVSTMRSFVTDDEVTVWHDRAPHNLTDVFGMTYNQFTRPNGHVSVEFA GTLAKTPASDAQALIELVTPFDGTDVLASYGHYAWKDYAAVTRHGFGKGDAEWIATLLDA DTIRAVLREAVEHAGIADAGTALAGQVTVRRGTNARGEQVTYLLNYSADEVTIDSPVSGD VVVAPVVVGTDGTVDESATAAIALKEGSKVEVGDRLTIGRWNVVVIAG >gi|148337400|gb|DS264459.1| GENE 433 480333 - 480962 459 209 aa, chain - ## HITS:1 COG:no KEGG:BAD_1212 NR:ns ## KEGG: BAD_1212 # Name: not_defined # Def: TetR-type transcriptional regulator # Organism: B.adolescentis # Pathway: not_defined # 1 209 1 209 209 419 96.0 1e-116 MVTEGKKRVRKSPEERKREIIAAAGRLIGEKGYYGTSLKDIADAIGMSQPGLLHYIGNKE RLLSLLVTDSYDQQGTPADFAKSGLPGSDSDGMLFPAYLRFLVRYNAQRRSLLQLYMVLE TESFNADHPLHEYFENRPDLTWDHYSRFAWKLPPQIGGWDNMRPIVRQCIEAMDGIQLRW TRKPPIDLYDEWLAFERMIFPSPVWDGYR >gi|148337400|gb|DS264459.1| GENE 434 480999 - 482270 1645 423 aa, chain - ## HITS:1 COG:BMEII0528 KEGG:ns NR:ns ## COG: BMEII0528 COG3572 # Protein_GI_number: 17988873 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Brucella melitensis # 20 397 14 389 457 148 29.0 2e-35 MTTPKITYAHLLTEPNPKHVESLIKFFESGCQQRGTGGFGVEIEHLPVHNSDDTAVTYYE SNGIEALLNRIRPYYDENKEYWENGRLVGLARDGISVSLEPGGQLETSIGILHKPEELAT LYGAFRREVDPILEELGFRLVNYGYQPKSSYADIPVNPKDRYKAMTAYLGRVGQFGPCMM RCSASTQVSIDYVSEQDAIAKLRLGTVIGPILAWFFRNTPYFEGRENPYPLLRQRMWDYL DFQRTNVIPGLFDPRFGWEDYAVDVLSTPMMFADLTHTPEALAVPGTDLHHPAFYENAND VYPDRELNAYEINHVISTHFNDVRLKNFIEFRHWDSLPVARAERLTEIIGSLFYDPTNLD RLESYFDGIREEDVFEAKANLQARGRQASPYGNSLEFWQEFLGLEGVLADEPGDPKHPDV FQA >gi|148337400|gb|DS264459.1| GENE 435 482497 - 487242 6371 1581 aa, chain - ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 17 714 5 663 663 695 50.0 0 MVEAAVTADNTCDTKPLRVGLDIGSTTVKAVVLDQTDSLDAVLFSDYRRHHANVRATVAG LLEDIHKELEARGRGDEPIRLAITGSGGLALADNLHVPFVQEVIAETRAIDEEYPQADVI IELGGEDAKITYLKPTPEQRMNGSCAGGTGAFIDQMATLLDTDAAGLNDMAKHYETLYPI ASRCGVFAKTDLQPLINDGAAKPDLAASIFTAVATQTIAGLASGRPIHGTVIFLGGPLFF MSELREAFHRALEGKVDEFIVPTDAHLYVAFGSALLAGEPDQLEEGQHFEARTCADILQS LEDLKNLPANTPTMPPLFPTEADREAFNKRHHREHVHIGTLDGAQGPHFLGIDAGSTTIK ATLVNDDREIVWSSYATNEGSPLTAAVNIVKQIQSQLPEDAWIARSCATGYGEGLITTGL HLDEGVVETMAHYRGAEMVSPGVTAVIDIGGQDMKYLAISDGVIDSIAVNEACSSGCGSF LQTFAQSMGLTIEEFTQAALNSTHPVDLGSRCTVFMNSSVKQAQKEGASMEDIAAGLCYS VVRNALYKVIKLRDSGELGDTVVVQGGTFLNDAVLRAFELLTEREVTRPNIAGLMGAYGA ALTARMHYTDIADGLDDGDADADGGKTVDIDGVTHTASSIVSGSDLDNLSMTTERDVCKL CQNHCKLTITTFQDGSRYVTGNRCERGGDSKKQRSDRPNLYDYKYKRCFAYRRLTDKKAT RGEIGIPRVLNMYENYPFWFTLLTSLGFKVMISGRSSHELFETGIESIASENICYPAKLV HGHIKWLLNKGIKTIFYPCVSYEENFVPNTDNHYNCPVVANYPVVIGANMPELREEGVRY MRPYFNMANHELMVDRIVEEFAWANVTREEAETAVKAAYAENEVFKHDVQMEGLKALAYM KEHDCKGIVLAGRPYHVDPEINHGIPETICALGMVVLSEDSICELQPGEKLNLSEFLAEG EEDPRKKNANGFRHVDDRKVTKMPLRVTNQWAYHARLYAAAHFVASYPGLELVQLNSFGC GLDAITTDQVSEILADKADVYTMLKIDEVSNLGAAKIRLRSLKAAVEERERNKKNDGFRK TGTEAPTPGRQVMLDTVMKANPKLTEAVTAASKRAAENGKGESQETAKTQTNGKGASAHN SATLSKYANRIPFGKNMKDYTIVAPQMSPIHFSLVESVIRSGGYKFDILEHASREDVETG LKYVNNDACYPAIMVIGQLVDAILEGKYDPDHTALAITQTGGMCRATNYFGLIRKALVDA GYPQIPVIAISTQGIEDNPGFTATPALLHRAVKALIIGDLLMKCLYRVRPYEVTPGSANK LYETWDTIVRETLENHGRSKTARKFIGKGYLPYPTLVKEIVKSFDSLPLKDEPRKVRVGV VGEILVKYQPDANNHVVDVIESQDCEAVVPGIMEFMTTRPYISDWNEHYLGMGGSKIGYA LMRKGLDLYNAPVREAIDLAHGKFSQDLPMPELVKKADEVTSVGVQAGEGWLLTAEILEL IESGCPNVVCAQPFACLPNHVTGRGMFGKIRRLHPEANIVSIDYDPGASEANQLNRIKLM ISAAKKAHRAAEEARNSEKAA >gi|148337400|gb|DS264459.1| GENE 436 487454 - 488167 607 237 aa, chain - ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 31 216 2 185 196 241 62.0 1e-63 MVSSADPAVSRRDFAAGETGRGPFIPTNRASNPRAGQWTNAMSHNMIADYKRFLMTDGEG IRCSLYVSGCPFHCEGCYNSSIWDFRAGHEYNDRLEAQIMADLSLPYVQGITFLGGEPLL NTGVLLPLSRKIRERFGRTKDIWCWTGYTWEELMREGESPDKRELLEQIDILVDGRYIKD LHDSLLQFRGSSNQRIIDVPKSLESGQVVLWSKLHDQTRFIPEIYGKDRAAGEGAAS >gi|148337400|gb|DS264459.1| GENE 437 488213 - 490618 3388 801 aa, chain - ## HITS:1 COG:L70400 KEGG:ns NR:ns ## COG: L70400 COG1328 # Protein_GI_number: 15672255 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Lactococcus lactis # 24 792 17 729 747 880 57.0 0 METQTLEGVATETENAPEMVKVLVEKRDGRVVDFDPINIISAVKSAFADLDKKIGPQEER LIRDIANQVEAEIKDRYNGPAKIEDIQNLVEHGLIEDHLYDVARTYTNYRLNKDIERAKA TDINEAVRRLVDRDEALVRENANKDSNVYSTQRDLLAGAVSKASAFSMLPDAVSNAHMKG DIHFHDADYSPFTAQSNCSLPNYWDMLANGFTLGNAPMGSPNSISIAATQITQIMKDVAS SQYGGQTANRADEHFAEYAKKDYDKFLEQAHEIMPDDLPIEIAERQVRMAKAVEPKRLHF EKDRPALPMDEPFDKTSDRLQQLREIWAKIQTRKAIYDAMQTMEYQINSNRVSNGQTPFV TVGFGLGTDWFAREIQRAIFLNRIRGLGSEHHTAIFPKLVFTIKHGVNADPGDPNYDLKQ LALECATKRMYPDVIFYENIVKITGSFKAPMGCRSFLQGWIDPKTGKDVEDGRMNLGVVT VNIPRIALESHGDKDRFWKIFDERMTVAHQALQFRIMRCKQATPVNAPTLFRFGAFGRLG ANDSVDQLFRNERATVSLGYIGLYEATSVFYGKDWMRDHDWDPEGKEFALSIVKRMNELC KDWSTAEGYHYSVYSTPAESLTDRFNRMDREKFGEVDGVTDHDFYTNSFHYPVWLQPTPM EKLDYEKDFPYYASGGFINYCEFPCLQANPKALEAVWDYAYTIGIGYLGTNTPIDRCYEC GFEGDFEPTEEGFKCPECGNSDPDRCNVTKRTCGYLGNPVQRPMVHGRHEEIAHRVKHMS GETGHVTLDDGSEREWFEEAK >gi|148337400|gb|DS264459.1| GENE 438 490931 - 492211 1134 426 aa, chain + ## HITS:1 COG:MT1139 KEGG:ns NR:ns ## COG: MT1139 COG1570 # Protein_GI_number: 15840545 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 24 388 2 367 415 251 41.0 1e-66 MTWNPDYNPPTAQRTSKPLPRLASETTADNPWPVSLLSEKFYTAVERWPSVWVAGQITQI NTRRQGSAYITLRDDQQDIAMEVNGFGRFAAAAAPFVQGDRVIIHGKPNVWMKRTSLSLR GDAIITAGAGGSLKAMIDELRKKLKGEGLFDADRKKPLPEFPHCIGLICAPQARAEGDVI TNVRLRWPVVGFKVTHVHVQGEQCPSDVVAAIRQLDADPDVDVIIVARGGGAFEDLIGFS DENVVRAAAAAHTPLISAIGHEDDWTLLDLVADLRASTPTDAAKKVVPDVHEQMQLIQVN LDRMRMRIDATVSNETRLIEGYANRPSLTQPLTMLEPHQRFLDDARTRMRIGLTRILDDA SLTIEKAHASLTALSPQSTLDRGYAVVQCADGHVLDDADKVKTGDQLTMTLKHGIVVSEV KTVTKE >gi|148337400|gb|DS264459.1| GENE 439 492215 - 492499 532 94 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1546 NR:ns ## KEGG: BLJ_1546 # Name: not_defined # Def: exonuclease VII small subunit # Organism: B.longum_longum_JDM301 # Pathway: Mismatch repair [PATH:bll03430] # 2 93 14 105 106 107 82.0 2e-22 MSNEAAPASSLTDKEREAIAQMPYEEARDKLIQAVQALEAGGLNLDQSMRQWEIGEALAK RAQSLLGEVRAKLDAAQAEQATAANTAGTQDNLA >gi|148337400|gb|DS264459.1| GENE 440 492968 - 493159 201 63 aa, chain + ## HITS:1 COG:no KEGG:BAD_1218 NR:ns ## KEGG: BAD_1218 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 63 34 96 96 109 98.0 3e-23 MQDIPYSSIAERLAHTNPVGQLPGPLSYKLLDQFTMPMLPTEPQCTNVIACIRYSNNMPV VTV >gi|148337400|gb|DS264459.1| GENE 441 493168 - 494316 1053 382 aa, chain - ## HITS:1 COG:no KEGG:BAD_1219 NR:ns ## KEGG: BAD_1219 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 382 1 382 382 717 98.0 0 MAQAKTRQPQGPATGKSQASAKANRAKAKPAATRPVKPLRTLNKTKTHRVRNFICAVIAF IFALAALLGTVTHILPEELQALPYMPIVVSLVPWFTLLAVIALVCAIVSKRTVSIVMAVL AIALQAFWQYPFFYQPSKLPRAAVAAASGETVNTDDGYARLMTCNVYKGRADAREIVDLV RSEHVEVLALQETTDAFVDDLNRAGIASYLPYAQVSSSDGVYGNGLWSASPLDDPSDDDV DSSASFMPGGTVSFNGGATQVRFVSVHTTSPTNDYWQQWKRSLDELAKLRFDTSRRYVFM GDFNATYDHTPFRNILGNRFSDASRQAGEGLKFSWPANVDYVPSFAGIDHVVLDSGMQAG QVRTVKVDGSDHKALLAIVRVG >gi|148337400|gb|DS264459.1| GENE 442 494425 - 494661 323 78 aa, chain - ## HITS:1 COG:no KEGG:BAD_1220 NR:ns ## KEGG: BAD_1220 # Name: not_defined # Def: membrane-fusion protein # Organism: B.adolescentis # Pathway: not_defined # 1 78 1 78 78 133 100.0 3e-30 MAIRKPNGGAKAASTAPLTSVQDTRSRGNGNGNGERVLMSFKIPSDLKMMLQENARERGT TASRIIIDGIRHELGLDD >gi|148337400|gb|DS264459.1| GENE 443 494661 - 495251 915 196 aa, chain - ## HITS:1 COG:slr0110 KEGG:ns NR:ns ## COG: slr0110 COG1192 # Protein_GI_number: 16331850 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Synechocystis # 2 163 6 168 211 69 31.0 4e-12 MIISVINLKGGSGKTTTAMALATAAARHNRNVSVLDTDPQGDATTWAGDAEDAGETLPFT VDSANIGKLKRLRKTMADDELVIIDCPPAGNVVDVACDVADFVIVPATQGPFELSHALET AESLDVAGKPYALLLLKVENNKLAGNAVNLIRERGASVFDASVPKRVGMQKVIGHAFPSN LNGYEDVYLELEEAIA >gi|148337400|gb|DS264459.1| GENE 444 495742 - 496470 692 242 aa, chain + ## HITS:1 COG:no KEGG:BAD_1222 NR:ns ## KEGG: BAD_1222 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 242 1 242 242 413 90.0 1e-114 MTIASCGSVSAITLGLPNSTAIPAEKATLPKGLFVAKIPVSAKTKQQLANDIETITMLSL LQSRNIGLAAGTRVPEILVIGLRLHGLNAPVPTDIVELIAMQRKSGMLFVCVRDADFEGT TRQECAFAVRRALPARAGHTTTSKVFISEWKPAGEATLDVSDPTVESVDALWESLCSQVI LDDPSPIDLNARLARRMQIAQLTAQVDKLTRDHQRAKNPEQRNEIYAKLHKTKRQLEELQ GQ >gi|148337400|gb|DS264459.1| GENE 445 496613 - 497584 1105 323 aa, chain - ## HITS:1 COG:ML2434 KEGG:ns NR:ns ## COG: ML2434 COG0248 # Protein_GI_number: 15828315 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium leprae # 10 314 2 305 339 236 44.0 6e-62 MVTLHSHATRLGVLDIGSNTVHMLIVDAAPGARPEPEASTKSTIRLMQYLKDDGSIKKAG TEALLSAVEKAMKLAEEYEITQLLVLATSALREAPNGGKILRKIEEAIGQPVTVLSGVDE ARLTFLAARRWYGWDAGRLLVIDIGGGSLEVAMGSDEDPTVALSVPAGAGRVTREFLPES GVADDDDLEAARKNIRKILEPMVKSFPKSKHPMHAVGTSKTIRSLARLAGAVMRQPGRVD TSIMTIDQLEDWLPRLAAIAPDQRTALPGVTPERTYQIVGGGLVIDEIMKALDVKEIEIC PWALREGAILRWLDQFGRTRLGF >gi|148337400|gb|DS264459.1| GENE 446 497770 - 498975 1471 401 aa, chain - ## HITS:1 COG:PA4722 KEGG:ns NR:ns ## COG: PA4722 COG0436 # Protein_GI_number: 15599916 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pseudomonas aeruginosa # 13 393 6 382 390 284 43.0 2e-76 MGNAENGAQPQLSKRAQIANPFRAMVFGAMADEMIADGTDVVKLSLGEPDFGAPPAVRDA MREQYDGRPLPYTAAMGLPELRQAISDFYKERHHVDVDPKRIAITAGGSTALLLSAALTV NDDDEVLIADPSYPCNRELVRAFGGKVVDVPTSAATRFHLTPELCKEYWTDRTKAVMITS PSNPTGTTIAFDTLKAVCDLARERGAWRIVDETYLDLADREPDGSDVKSVLACDPDAIVC SSFSKFFGMTGWRLGWMVVPEYALEAMDDLATNFFLCAHTPTQHAALACFTPETLAVCEE RRQELLERRRIVVDGLAEIGLPLEVEPNGAFYAYFNISSTGLDAWTFCERALKEAHIALT PGRDFGEATADTHVRLSYAASREALREGLKRLGDFVAKVRG >gi|148337400|gb|DS264459.1| GENE 447 499019 - 499534 446 171 aa, chain - ## HITS:1 COG:NMA0429 KEGG:ns NR:ns ## COG: NMA0429 COG3727 # Protein_GI_number: 15793434 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Neisseria meningitidis Z2491 # 33 167 5 138 140 137 52.0 1e-32 MTAEHRRQTAKPGKTGKPKKTGKPRKTGKPEKYERGTRSYTMSHIRGKDTSIERMVRSFL FAKGLRFRKNDKRYPGHPDVVLPKYRTIIFVNGCFWHMHEGCPKATRVPKSNVEFWTAKL LRNHERDARQRAELEADGWKVIVVWECELGKKVRDERLERLYREIVDDSVK >gi|148337400|gb|DS264459.1| GENE 448 499656 - 500660 1121 334 aa, chain + ## HITS:1 COG:CAC1480 KEGG:ns NR:ns ## COG: CAC1480 COG0673 # Protein_GI_number: 15894759 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 1 326 1 320 320 186 32.0 5e-47 MAQINVAILGAGRIAQSMAETLVKMAADDRYRDLVAPYAVAARDGERAAAFAAKYGFPVS YGSYEELVADPNVNLVYIATPHNFHAEQAILCMRAGKGVLVEKAFGANTQQAREILDVSD ETGMLCTEAIWTRYMPSRGMIDDIIASGVIGEVQAIDANLCYPTTAKARITDPALAGGAL LDVGVYPINFIDMIMHNAPIARVESSMQPYETGVDAHNSMTFYYQNGVMATAQSSILCHS DRMGAVWGTEGYLTCQNINNVEAIDVFDGSHAVTAHYDVPEQLTGYEYEVASAAQAMLDG RTECDEMPHSDTLRIMECMDSLRADWGLKYPFEA >gi|148337400|gb|DS264459.1| GENE 449 500749 - 502749 1899 666 aa, chain + ## HITS:1 COG:YPO1440 KEGG:ns NR:ns ## COG: YPO1440 COG0210 # Protein_GI_number: 16121718 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Yersinia pestis # 90 614 179 652 661 224 32.0 3e-58 MGLLRMLKYVLGTEDETQQPRQTQSSAKNANNAKSARTGQTKQTGQVARRVTQPQLQPHA TPQRQSQRRQSQQHQSQRPAKLTPQPLLPADRIDKARGIIGNIEKHELSDEQISAIAGAG HNTLVLAGAGTGKTTTIVGYIAWLLATKRATPEEILVLSFTKASADEMSQRIMASTGKRI RACTFHSLGLEICRAATIANRPIIDGHASNAVVRDTFDRLLAQNIPYRLLAFKLMSKELF GKYGAAAKREDFQLPTDDYAFNQYRQSLVENAQTIIQHMRQNNIGIDGMRELNERRGGKH IGRNREMLQLVEPLYNAYVGNFRATQGIDFPGMITDAIRCVRRGAYRHPYKYVLIDEYQD MSRPRYELIRALREQSDFTLFCVGDDWQSIYRFAGSDIHLILDFADIWRDWGPTRMFQIT TTRRFRQSLIDASGAFVMQDKSLYAKQLRNPSDKKDYSLKALGGATQEERFDAIVEQLRK LPKAASVLMLGRYRSDLNLLSRNDRDGLFQIDEHTGGIVFPEKPDMDIKFMTAHASKGLQ RDFVFLLCCSGGLKGFPSAIPEEPLLGLLLPEVERMPHAEERRLFYVAMTRCKKKLFFVV DQSRPSRFMYELHDRICPNIFRGVKLPPQCPNCGEALRLRHTGSDPSRAFYGCTGFPNCR YTRPCK >gi|148337400|gb|DS264459.1| GENE 450 502852 - 503328 298 158 aa, chain + ## HITS:1 COG:Cgl1127 KEGG:ns NR:ns ## COG: Cgl1127 COG0494 # Protein_GI_number: 19552377 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 17 141 2 126 131 141 54.0 6e-34 MTATDQNPQQSAQPTPRKTINVVGAAIVKDGKVLCAQRGEGRSLAGFWEFPGGKIEPHET ARQALHREIEEELLCEVEVANEVCTSSYDYDFGTVVLTSFVCHLISGAPHLTEHHEIRWV APAEMPTLDWAPADREAVRLISAMDFPAFPAATHESDD >gi|148337400|gb|DS264459.1| GENE 451 503328 - 506495 2789 1055 aa, chain + ## HITS:1 COG:Cgl1126_2 KEGG:ns NR:ns ## COG: Cgl1126_2 COG1061 # Protein_GI_number: 19552376 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 232 1055 20 787 789 520 37.0 1e-147 MMRNMDDHDHSSLVEALLSGFVNKKDNVDAQYEPTLIANHDGRTMEYAIKDELQRSQDFD MSVAFVSQGALQVLKQYFLDFADNNDHQAGRIITSTFNYFNSPKAFRELLKLQRETGIQV QVWQPERSSRNDDDATAAYPYHPKGYVFHHAQGDEPLYSTYVGSSNLTINALNSNREWNL KVATTDTSGLAEQLSEEIESQISESKPLTDAWLKLYEEDFKKYAPQRPNRKPIEKTSQSQ TIQPNAMQVEALMNLAQLRKQGESRAIIVSATGTGKTYLSAFDVRQVKPNRMLYIAQQEQ ILKKAEESFQKVLGCPKSELGLFSGGSKESDRKYVFATVQTMSRPETLAQFDADEFDYIL VDEVHHAAAESYKRVIDHFQPNFMLGMTATPERTDGANIFELFGNNVAYEIRLQKALEED MLCPFHYYGVHEYIQDAPDEKIAGKDVKVESMTDQERNELSRWLEELTDPNRVRYIIDKI QIYSEAGTPVQGLVFCSRREEAKRLSDLFNQQMNQQAERPYRTKAITGENSQMERDTAVA QLENGELDYIFTVDLFNEGVDIPHVNQIVMLRQTKSSIIFTQQLGRGLRKASGKDCVVVI DFIGNYANNYLIPIALYGHTGDRDVARKNLQRETIGVSSISFDKIARERVLASLDTADLS NMKLLSQQYQQMRYELGRIPMLMDFARRDASLVFTMASKNDDYLSFVRSREKSLSRGKNA TVSYLEQLESTSDAHNGVLKMLTATQLRGLRPHELLVLAALCGMDWQRIDPDCSEDALTA LREVASQHAITIVDLQTLLTALFPDADSNELQCRSAFATLDYSYFIAANSKRFGQTPLVR LCDDGAYRLTDEFRSMLEQTTFRTFFTDTVEAGLFNALALAESSRKHHIRQNHGFLYGEK YSVFDVMRLCGWPAEQVPQNVGGYKLDTETGSLPIFIKYEASQYGDRFLNPGEIEWFSKN NRSLKSNEFRWLLDGTERTPEWQNRHFVPIFIRRKAEEQEKSYYFVGSAVALDDVRASVN PGEDGSESKVVISTLKLGKPVDSELYRHLTGKSAL >gi|148337400|gb|DS264459.1| GENE 452 506498 - 508228 895 576 aa, chain - ## HITS:1 COG:no KEGG:SAS0375 NR:ns ## KEGG: SAS0375 # Name: not_defined # Def: hypothetical protein # Organism: S.aureus_MSSA476 # Pathway: not_defined # 5 514 3 542 608 187 28.0 1e-45 MVAHYEMMTLKVSDLDRVKIPTFQRGFVWTAKKKNEFIETLHEGLPFGTLLVYPESQDTE SKLILIDGQQRLSTIRSYQNDPLLYWKPLNKEYFEDKRNRASSLLGEELSVADFSDLIRM EKAEQLEWGVAHSGNGSSCNVLEALKVVDEVQQRIKEYVDLDGLSILAIKYTGERDRIAE VFANLNRGGIPLKKYEIWNAAWIDTQIALLDGGISPLQDEMLDNVKTYYSRMAQNAEFDL DGYSEDELTRSRTISLSEFGSALGLFMMKRLEALIPQSETSAQEYGFGVLGIAVDVDNRK LDTLNAKIDQIRNSVEDILKRVDRICINLNDIFEKYLKRYYAQKSNGYELGLSSTFKVLS YFAALWNLDPDSNEYKQSLRNIRSYYIYDSLISAWSSHGDQRLLEYYPNKSRNYMQPIGK EQFKKAFDQWLDDSTPGVNFNSETKALMTIHANLTYLSKDVSFGESLELEHIIAKKRIQA AEDGNKKHLLGGNLGNCMYLPRSTNNSKKDKTLYEVNEDHRFDALIKSSAYFSETEMEEI ARALDDHEYETVNSFILQRAKAVGYTISDLLLDGQA >gi|148337400|gb|DS264459.1| GENE 453 508558 - 508803 106 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISLICGRFSCASEVISLICGSFLRDSQSRGCDSYPLDSDLLKRPATYNANRFSQGSNLP HISKMGTKNMVYSADLPVRWR >gi|148337400|gb|DS264459.1| GENE 454 508893 - 509372 585 159 aa, chain - ## HITS:1 COG:no KEGG:BDP_1664 NR:ns ## KEGG: BDP_1664 # Name: araG # Def: argininosuccinate synthase # Organism: B.dentium # Pathway: not_defined # 1 159 1 149 149 256 79.0 3e-67 MKVASGNVLWRQRKRNWCRTPFTFTVYALTDKELSVKTGILNENFNLIKLFRIVDISVER TFLQRIFGMSTIVLDTRDQSSGNGVVALKNVLNGFEVRKVLQEAVDASRRENGMSAREFL GGPGGSAGLGGPGFGPGPDGPGFDGGFDGPDMGGYADGR >gi|148337400|gb|DS264459.1| GENE 455 509533 - 511215 1979 560 aa, chain - ## HITS:1 COG:Cgl1370 KEGG:ns NR:ns ## COG: Cgl1370 COG2304 # Protein_GI_number: 19552620 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Corynebacterium glutamicum # 53 559 39 524 525 150 27.0 9e-36 MNARKLGAAAGVIALIVGLFTGCGSTNSASNATSDGDSNSGTTATYSVDGAKDSIRIASG SENKEVSGAIEQAAKQSKVSVTVDYMGSLDVMDALRNKGHHAGRDYDAVWPASSMWITMG DIKHVVKDQVSTSTTPVVFGVKQSKAEELGWANTDGITKPVSTKDIMDAVKAKKLSFAMT SATQSNSGASAYMAFLTALNGGKSALTKDDLNDASLRKSVKTVLSGVNRSSGSSDWLKDM VVNDPDTNDSMVNYESLVIQADKALTAKNKEPLLAVYPSDGIAISDSPLAYVDRRQDKED AFKRFSKSITSKDSKKLFEQAGRRTGSDGTLAYAKDAKVKDSFRKEWGVKSDSSVLKTIT MPSSDIIEQALDQYQTVLRKPAYTLWVVDYSGSMSGKGKSGAVAGLQAALDTDQARASHI EPGDDDVNVFIPFNSSAKVAQVAQGKQTATLLAASENQVANGNADIYNALEVALKNLPSD RDDYTVAIALLTDGQSDTAKLDEFKQQYASDGKGVPIFSIMFGDADSQQLDDLAKLSNGK VFDGRNGNLSGIFREVKGYN >gi|148337400|gb|DS264459.1| GENE 456 511505 - 512947 1351 480 aa, chain + ## HITS:1 COG:no KEGG:BDP_1720 NR:ns ## KEGG: BDP_1720 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 2 475 6 430 438 632 71.0 1e-179 MGSFNRRQEADDLTDYVNNGWLSSAEFDGPTFLWNHLIREASQEDAAQRNDVPVANLSDA DVVINMPMQWYFDALASMVPTAERTDTGVEIPRIDMPTFSIDSQALSGVDAVVGNAVIST RWLDAVGNLAKAVEMTARFVGNVADRDNEGFDYLKDLIQTVRVYMDAVACNADPMTGEQA LRMITQVACNEDFRLNAMQMVELLSCGLSFAQWDDTRMFAYDALNKGIAAMRDFAAKSGN GDASSTTGDTMNSVGSIDSDVTGDTGARDATATQSHNLRDTSSDADNAHSTNSTDAADGA DTANSITHSTGAAGDSTTGGSPTLSPEELNDLAMLDPSFLSKQQLAQTAQNQFDHAVQFL RHDLMRISGDAEEADRFLRDNHTSEPLADAYAARLIAAERWQDLLNFVDLVERDAPNQCT VMFPEEVVPYEWESIREAALEALGRGGELVAMYQERLDDTYDPNTELNRMKLQAWTQAKE >gi|148337400|gb|DS264459.1| GENE 457 512987 - 514438 647 483 aa, chain - ## HITS:1 COG:SPAC513.05 KEGG:ns NR:ns ## COG: SPAC513.05 COG0383 # Protein_GI_number: 19114891 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Schizosaccharomyces pombe # 3 466 611 1076 1077 167 29.0 3e-41 MGLNQFHDILPGSAIAWVHRQARADYVRDIARLRDIAAEAGASIASVRDDADMRSNAAIV PYTAKNGDSWIARTAAVGTQDDDANGTDAVADESTIATTCDDGRIILDNGLLRAIIAPDG TVRSLIDLDNGHELVPDGSGIGHYELLRDEPYEWDAWDIQRDAFLSAEGIDDSHVERVTE TKRGGATVHVSSTTDGVSIDACITLRAKSKSLEFRTKVDWRASERFLKVDIPMAIQADRA QYECQYGMVERPIQKNTRSDEAKYESCTHRFVRVADAGYAAAVVNASTYGSDVSPIHRNT ASGPVRGTMIRLSLLSSPLYPDPNTDKGVHEFAWNVVADASMPAVLDEANRLNAAVLPAV PAFDPLAQLNPVDGVMVLDWVKLADDGSGDLILRVYEAVGGEAHARLAVNAALGKATVRE CSIMEDARLDAELPAAFADGDPSVARTAQGAMLSLHPFQLATLRVSCGSDGGNTDGNESG SLR >gi|148337400|gb|DS264459.1| GENE 458 514429 - 514812 483 127 aa, chain - ## HITS:1 COG:SPAC513.05 KEGG:ns NR:ns ## COG: SPAC513.05 COG0383 # Protein_GI_number: 19114891 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-mannosidase # Organism: Schizosaccharomyces pombe # 1 126 317 442 1077 144 46.0 4e-35 MDEDPDFTYAMSSAQQYAWLEQEHPDLFARMLQRIKEGRFIPVGGMWVESDNMLPTGESL IRQITFGMRYFREHLGVEPKGLWLPDSFGYCGAWPQIARRAGFEWFLTQKISWNDTTKFP HHSFEWG >gi|148337400|gb|DS264459.1| GENE 459 514870 - 515652 506 260 aa, chain - ## HITS:1 COG:no KEGG:BAD_1238 NR:ns ## KEGG: BAD_1238 # Name: not_defined # Def: alpha-mannosidase # Organism: B.adolescentis # Pathway: Other glycan degradation [PATH:bad00511] # 14 260 36 282 1074 515 99.0 1e-145 MCTKHYRIVSYALFANEGEPEQSADFLARVRENKVDFLDFMVPGAWGTIWGTTWFEVRGR IDRESVKGRAVELVVDLGWKRHRGPGFQAEGLCYRPDGSVIKAVNPDNCWIPLIDANGVA NVELDDAGRFTVYVEAASNPLVEADLPFAPMNLGERADGRPSDYVLTTMDVCAFNQNVFD YLMDLETVTSLMRELKDDDPRYWQLAKALQRSLNTYDERDIAGTLEPAKEKLAGVLSEPA YSSVIHHVAVGHAHIDSAWL >gi|148337400|gb|DS264459.1| GENE 460 515730 - 515948 81 72 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489106|ref|ZP_02029955.1| ## NR: gi|154489106|ref|ZP_02029955.1| hypothetical protein BIFADO_02418 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02418 [Bifidobacterium adolescentis L2-32] # 10 72 1 63 63 84 100.0 3e-15 MAHDSYGVSMVPQHNLKSKNIKEKSGSQSGHPVETPDKDLRRARKALPGGPGGDEKTGVP GATPAGKPGKRA >gi|148337400|gb|DS264459.1| GENE 461 515890 - 516201 77 103 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKRGFLERRPPGSPEREHEKWASREPKARPGGPIRLKRRRATLPHPLECSTIAAPGLSY RVRNGTGRLTRAMTTAKPRSRNDSQNMAAIPAIQLSCGGLGTG >gi|148337400|gb|DS264459.1| GENE 462 519475 - 519864 118 129 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MITKRSISKPNSIEEFGEIAISKKKRSFSFSCSRPLSSSQTTTRHTFPTRPEGNRPTPCG HRTAPQKQTCGVAVREPKSIPIPLPDGTNPIQADDLFHTSIHTIRHDCHAIVWHTLSKKH WTEFSVLAS >gi|148337400|gb|DS264459.1| GENE 463 521391 - 521549 153 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKRHRHDDSRNKKIDDRLIRKGASHKNLTVLQGLPATRKERTMNWQSLTIKK >gi|148337400|gb|DS264459.1| GENE 464 521806 - 523977 1939 723 aa, chain - ## HITS:1 COG:no KEGG:BAD_1517 NR:ns ## KEGG: BAD_1517 # Name: not_defined # Def: transmembrane protein alanine and leucine rich # Organism: B.adolescentis # Pathway: not_defined # 1 723 43 765 765 1316 99.0 0 MKQHSTDNTIPTAADDAVDEADSAVAASKTTDETTAKTTDKISSKTTNDTLPLPCDSAVP RLSRIALPVCSAIGVALAAAVVWAWFPHGSAAWTNPLHEIDAPAHYYFIRKILGEGVGAA THLWPNDEYYPPLFHLLAAGMIKLASLFGVNLSIYAAFNTVWLATSGLVWPIAIQLYASY FTRRLSYSAQSVCSPRFANARKSSARNVASVVVPLFPAILALIIPPLAVASASHPFQMLA SGPLIAFGLATTLLPFWLYTTLRLLDALATREHLVKWIIWFLVTAGVCMFAHPRIVFTWL LLMAPFVLTRLPWKAIAGLAGVVVLGAAVFLVYMMSSYKSDRYFNPASWFHTFVPNRTVP EALKIYVTDNIGGVQGWFMAAIVLIAFAVTVAAIIRPQWFAANRADSATVPGASAIDRAS DSTSAQPHEQVADFAAMPADRRNRKTSVSYRTPRSDASQLRRDAIAILLAFFLVGLVYVC STALTGWFPNIVAAAWYRAETRPLTMIPFGVLPLIVFAAVVLLRAGRLPNVTKIIAIVLL AALAISCQFGNTVRSALSDAVYANMTIDDARPDEQLTATKEKILKKVVKETGTDSVVVSD PLNGSMYATAMYGADMLFPIYNAKAEKNGAIFGQTENAFASGDGKVLTNTVCPLSADGDA YFLSMGGQAPSLQMFTFKQQYDTFHDQKLIDQYAKDGTMRKVQDYSNMASYAKGWALYQF NCQ >gi|148337400|gb|DS264459.1| GENE 465 524410 - 525810 1678 466 aa, chain + ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 145 401 161 410 486 71 23.0 4e-12 MFVLKNAWAALGRVKWRTALTALLALLVSFSAAVDLAVLRADDKANNETYQAQKASAVIR PSAKVTAKRDGADSNYTANYMTWDMYTKYAEAVQKNNLTFEYTLATSVPVRASKSLQAIA AKSDMSEDNTGGNLTLQAFYTNDAAKINDYGTFKVVKGKQLNYKTANDGVLVSQAVAKKN NLKVGDKVTVGNPTKASETYKFTVRGIYEYTGEAPAGYGSDAKYAKDNRENVVYTSYINF AQSGLDVAGTKGWAIPNLNIIFTLTDPATYNKFVRLVTKAKLDTSKFTISSPSLDAYKKR IAPLDAAAKAARTALLATLIVGGLALLALVLWAAIGGRRDEIGMAMVSGVTKGRLGWQFM LETFMMTVPGWAIGLIAGALLAKPLGTAWAGGQAVAITSASVWNMIWYGLGACLVLGIIA FMRVGFFDLGQLFAGRSDDSNESAEAKNADEPEETVESTERTEVNA >gi|148337400|gb|DS264459.1| GENE 466 525807 - 526859 1111 350 aa, chain + ## HITS:1 COG:ybjZ_1 KEGG:ns NR:ns ## COG: ybjZ_1 COG1136 # Protein_GI_number: 16128847 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Escherichia coli K12 # 151 349 22 216 253 75 32.0 2e-13 MSEKDVKDNETEALNNAAAENAENADIEAGETDMATSIESVDFAVVYDDGGDSIATESAE NAENTEGIATEDSVASDNANRVNETLALGATDDEQSLDQHETVQADSATSVSSQIDREIK HHRKKDAFFFKANPTFALDHVTVHNRKTGRDVLDDVSLAFHAGATHAVLVDAEDVEQHQA LVATMVGMMRTTSGNVMHKSTNLADATPVDVLGHRIGFIPQRFAVRGDLDAEGNVLYAMD ASNRNFLQPKPVIARELLKRVGFEEVTSGLPVGKMSALDQRRVAIARALSCEAEVIIADE PTAGLNRDDAAVVLGLLKKAKRDEDRKRAIIVVTDNPEVADQMEHCAELE >gi|148337400|gb|DS264459.1| GENE 467 526829 - 527020 108 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKESATHSAYDMFLAVCHRKPARIGTNQNQHEKSLADWHATPVRKAFASQNAARYSSSAQ CSI >gi|148337400|gb|DS264459.1| GENE 468 527392 - 528222 1047 276 aa, chain - ## HITS:1 COG:MJ0778 KEGG:ns NR:ns ## COG: MJ0778 COG1418 # Protein_GI_number: 15668959 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Methanococcus jannaschii # 119 219 43 125 169 68 39.0 1e-11 MTNESNETTESNKPTTGYIPTLAQVDELHRKIAQSQAAYDLIHGHCVVVADIARRMARRQ NALFTRRCTLPTDAPEKTGDFGLELTKDNTGEESLGMLHMPAVPSTEGLTGGTVPPWLID EHLVVIGGLLHDIGTYFLLKQDGSDGEPLKFDGPHYVQHGLKGYEYLLNEGVDESIAQFA RNHTGVGLTRETVESQGLPLPPADYVPMNLEQEVVMVADKYNSKSIPPKFLTAEAYTRKA ARFGESNKREWLRLLERYGVLDVKPLAEQYHMRIAE >gi|148337400|gb|DS264459.1| GENE 469 528464 - 529333 1242 289 aa, chain - ## HITS:1 COG:no KEGG:BAD_1521 NR:ns ## KEGG: BAD_1521 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 289 1 289 289 581 100.0 1e-164 MCRLLGFATAGSNTNLNGVLGMQNVRDFRNLSEIHNDGWGAALITVPDESPYRRDGGAPT PETGTAIYKNTIAARHDPIFDELANTPARGGLWHLRLASSNLPLILENQQPFYANGLSFI HNGDISDDQGRNIITNRAFPVDPSIVQSTGGRSDSAIFFAVILQYIGFGFALDEAVAQAV RELRKSYPKSSYNCMIQSQDQFIALCAAGREVTSKRIVEIYDQYGRGEQARDYRVLRYRA LGGNDDQSKGVVVASSGFDQRAEDGWTRLENDQMIVASNRTGEFRVRSI >gi|148337400|gb|DS264459.1| GENE 470 529708 - 531888 2645 726 aa, chain - ## HITS:1 COG:SPy1414 KEGG:ns NR:ns ## COG: SPy1414 COG3158 # Protein_GI_number: 15675333 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Streptococcus pyogenes M1 GAS # 72 716 10 648 666 562 44.0 1e-160 MANEPNEEEQPLLHAATYTQAPKVSHKVLTKEERQTLIKEHEAQQQEAAKLDEAASKGRI GRWWSRLQSGPDKITPAMAIVALGVVYGDIGTSPLYTMQTFLNGQGGLAHTDRAAVLGIL SLVFWSITLITTVKYVFIAMRIDNNGEGGIFALYSLIRKYGAWLAIPAMLGGAAFLADSV LTPAVSISSAVEGLETLPLLEPIMSENKELTLMITIVIIVCLFAVQSRGTERIGRTFGTV VMIWFSFLAVVGLVNLSSDWSVLEALNPVYGVEFLFSHHNAAGLAVMGTVFLSTTGAEAL YSDMGHVGRGNIYFTWPFIKIALVLCYFGQGAWMLNHWDDTAYNHMHGLNPFFEMMTPSV RYVAVLLSVCAGVIASQALITGAYTMVSEATRLNWMPHLQVRYPARTRGQLYIPVVNAVL CVSTLLVLAMFRDSEHISAAYGLALTVTMITTTILLAVYIWHDGKRVGAVVFTVVFLAIQ FLFFFASMAKFLHGGWFTMLLTLAILLIMYTWNEGTKLERAQRRHMQPADCVPVLKQLHE DDSIPYFTDNIVYLTSDPEMKRVDTDIFFSIFADHPKRARAWWAVSVETSDNPFTREYSV ENFGTDFLFRVRIRLGFKVSQSIPAYIHQIMNDLSKSGDLPKQTTRYPKLDADPNIGPIR YVLIHKALMPESKVSQKGAISLQIKYAIRHLAGSPVKWFGLAPYNPLIEIQPLFLATERP PRLKRV >gi|148337400|gb|DS264459.1| GENE 471 532133 - 533089 1171 318 aa, chain - ## HITS:1 COG:Rv1008 KEGG:ns NR:ns ## COG: Rv1008 COG0084 # Protein_GI_number: 15608148 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium tuberculosis H37Rv # 86 318 47 259 264 154 37.0 2e-37 MSKHHRNRNWAPAPQPLPEDAHVIDNHTHVASVVPFSQAMSHEAMEKGQGEVPVYSVDEL LEQAQKVGVEGVIDCGCELPNLMTAIDMAREHPGTVHAAIAIHPNEAVLHGHRGAPGPDG LPIKYKPWHDIPFDEAMAEVHRLATTYPNQVVAIGETGMDLFRTGESAKELQREAFRAHV ALAKELNLPMQIHDRDSHKEVIETLLADGAPERTVFHSYSGDAEMGEIARENGWYLSLSG TSSYKGNDGIRESAKLVGMSHVMVETDAPYLSPMPYRGRTNAPYMIPYTLQALADYLDRP LAEIAKATRETTREVYGI >gi|148337400|gb|DS264459.1| GENE 472 533182 - 535593 2484 803 aa, chain - ## HITS:1 COG:CAC3436 KEGG:ns NR:ns ## COG: CAC3436 COG3534 # Protein_GI_number: 15896677 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Clostridium acetobutylicum # 42 803 54 833 835 345 30.0 2e-94 MTIPTTVSVAPADEYPADGHTMTDKLTATLDKAGVRAISTDLWGIFFEDISYSGDGGLNA DLVQNGAFEYNRADSIDWSNYSFWRKIVPEGSFAAFGIHDNDPVATENPHYATVEVEHAP AALDNTGWDGMVFRAGETYDFTAWMRVRSESAMPVTVSLRGDDGSIIAENTITVSASAWT TYQASLTVPEHGDAGSSVATQGTLRLTFDGEGVIDLDFVTLEPRTTYRGLKHFRPDLVEA LADLKPRFMRFPGGCITHGLGMDNMYHWDRTIGPVEHRPHNFNLWGYHQSFRIGYYEYLC LCETIGAKPLPVLPAGVSCQNTSQGPVPVAQEDMPAYIDEVLHLIEFCNGSTATEWGAKR AAMGHPEPFGLEYLGIGNEDLIDDVFKNRFQQIFDAVKAAYPDIVVVGTVGPAPSGQDYE EGWKYAREAGLPIVDEHSYQSSSWWFHNLDHYDHTDRKGPKVYLGEYGSWNTQLINGLSE AAFMGRMELNGDVVAMASYAPLFAKNGHHSWNPDLIYFDNERAYHPYSYWVQQMYATTTA DTAWPVTVEGPSTLRRTLPDTVRLRIAGNAKADLNNLVITTASGETINLGNVAYDGRTID TALDLHADSYSIDTTVVYYEGRWGMDLICGDIDGKNHNIISLGRGHSVRVVRDGTAYALA GTEVSMNEVRPGTTWQVHVDVTDRGQAMKLYIDGTLIADGTEVKDEPRRTVTVSRNDKAG ETYVRVVNAMDAPISVDLRQILAELNISTASAASATATVLAGDNPYAGQVGEESPTRPRQ TAIDLTDGDYTAPAWSFTTITIK >gi|148337400|gb|DS264459.1| GENE 473 535815 - 536885 1066 356 aa, chain + ## HITS:1 COG:TM1200 KEGG:ns NR:ns ## COG: TM1200 COG1609 # Protein_GI_number: 15643956 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 1 312 1 294 333 147 30.0 3e-35 MTSSTPTLRDVAAEAGVSPMTASNALRGKPGVKESTRAKVIAAAKKLNYRINLTASMLKS GRSNIIHVIVNEFDSPFYSKLTQALSNEIVSRGLIPFIEQTQYSPDAAEHALSSNPFSGQ LFDGEILHATGLGTNVPLSKLNGGRPFVLLDACEETPTVDAVNFPNEEAERAAMQHLIDR GCRNIAIVGHRFAPRADLAHAQNAFALRLRGACGALSDAGLPYDESMVFEAGDVANGIIA GHAIAERILAARSGHGGTEFDGACCANDFAAFGVIRGLADRGLRVPQDVKVIGFDGVTSG SYTTPALSTIQVDFTQLAKFSVDMLSERIDHGTDEALPPRRAIIGYQLVDRESTAV >gi|148337400|gb|DS264459.1| GENE 474 537009 - 538046 1222 345 aa, chain + ## HITS:1 COG:no KEGG:BAD_1527 NR:ns ## KEGG: BAD_1527 # Name: xynD # Def: endo-1,4-beta-xylanase # Organism: B.adolescentis # Pathway: not_defined # 1 345 1 345 345 680 99.0 0 MSIDTQAYLFVHFIGEERNPTDEQLYFALSRDGVHWRDLRPAGSPALTWLGGEKGVRDPH IVRDPRGGFHIVATDLSIYYRGGWGPNDGATTNGSTGLVIWDSPDLVHWSEPRLVDVASK IPDAGMAWAPEANWDPDRGQWIVFWSTKSNAESSADPLANELGDPTNVYYATTVDFRVFS DPVKWIDRKNVIIDSTMLRDDDGWWYRASKDSEITIERTRNPYATTYEVLRTDDPNEWSY VGTLTDIFGNGRYSMHYLEGPELFRYNDEDVKVVNGRTMPFGLMCDQYAESKGYLSFRAA SLASHDPADWQRADDIDFGALKKRHGAILPITAAEYDAIETAFAL >gi|148337400|gb|DS264459.1| GENE 475 538077 - 540449 2014 790 aa, chain - ## HITS:1 COG:SP1898 KEGG:ns NR:ns ## COG: SP1898 COG3345 # Protein_GI_number: 15901725 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Streptococcus pneumoniae TIGR4 # 373 622 317 575 720 86 24.0 2e-16 MISGAGAMNPVCPREDGRLEWGNGVVSMLFDTAGDSPVRLCNVAGRGMGPIGGRVADDGR TVLERDPRPIVEVRAANTGSQDNRLTLIATVAGSVLRFVSAAASEPEEGSAEPYRLEIVQ FASYAELEPHGRAFEPTAAERAEAAAQPSPETVRHADATAGLVVTSVFEAFPGLSAVRTY TRLSSARPLPIEAVPSLNLTVPMRVNCGKIDHSRVFWGDSAWAVENDWRSRPLRDVSVRN RNQVINPGQSSSRFAMSSASTWSTGVHEPAGIVQVEGSRRQSRDFSVMWQIEHNGPWEWE IGEDDPGLHISAFGPEYQDHHWYTELGEGHDFESVPVSFAISAGDWQQSVAEMTLQRRAL RAAKARELGRSEQFERTQGLVIYNDYMNTLFGDPRLEKELPLVEGAARVGADIFCIDAGW YDSTDGGWWDMVGEWQASTNRFGEAGLKGLADTIRAHGMGLGLWLEPEVIGVKSPLAQSL PDDAFFQRHGVRVCDSGRYLLDFRSPAAREHVTRTVDRLIDDFGAVFFKFDYNTVPGVGT DLDAESAGAGLLGHCRAYLDWLDDLRRRHPDVMIENCGSGAMRADYAQLQRLDLQSTSDQ CDPLIYAAIAAGAGLTILPEQQGNWGYAQQEMDDETAVFTLATGILGRLYLSGFIDRMDE HRLALVRDAVALHRRVLTEQQELVPFWPARLPDFDGDWLVVGLRHPSFLPSEDDDPCDYI IVWRRGGTPSVNVPLSEDCHIEQIFPNPAVPEHAPDAKPWTVERMDPETVRLNAATSKQP SARIFAIRRA >gi|148337400|gb|DS264459.1| GENE 476 540671 - 542836 2204 721 aa, chain - ## HITS:1 COG:ECs4459 KEGG:ns NR:ns ## COG: ECs4459 COG3533 # Protein_GI_number: 15833713 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 # 11 719 6 648 656 600 44.0 1e-171 MTTTNRTSHPIALRDATVTDPFWASRQELVRTQVIPYQWNALNDNVPGAAPSYCMHNFKA AAAQNAEHHKEGKAFVPPKYTFRGFEALPDDPAHPDPDKFYGFVFQDTDFSKWIEAVGYS LTHHPDADLEATADTAIDIVCAAQLDNGYLDTYYILNGMDRHFTNLKDHHELYCFGHLTE GAIAYYQATGKRKLLDAACRFADYIDSRFGTADGKLHGYPGHEIAEMALVKLAETTGEQR YADLAEHFVRQRGQQPLYFELEDRRRAREDGRNYAPREQNYAYYQADKPITEQTEALGHA VRAAYFYAGAADVARLTGDSDLLASCERLWRNIVDRKLYITGGIGATHMGEAFSFDYDLP NDTAYSESCAAIALAFFARRMLEIQPKSEYADVMESALYNTTLAGMALDGKSFFYVNPLE VVPEACHRDERKAHVKPVRQKWFGCACCPPNIARIVEDVQQYAYTIGDDSSTLYVHLYMG GGVHARLSGTDVRLDVMSDMPWSGKGSVTVGFGTAGSASDAPKDAVFTIALRLPAWAGGE TASDAVTVRGRDDISRVIRDGYLYLTGAWHDGDVVDFDFPMPVHMVAANPLVREDAGKVA FVRGPLAYCAEGVDNGANLHLLHADTARIASDPSCVSVDRIVFHAGAVAQDEQGLGEVDA VDMPMTTLAIPAWREVEDSAQTSALYHDWRPAERKTTTATLIPYFAWANRGENEMTVFLR G >gi|148337400|gb|DS264459.1| GENE 477 543071 - 544858 2346 595 aa, chain - ## HITS:1 COG:lin0155 KEGG:ns NR:ns ## COG: lin0155 COG1132 # Protein_GI_number: 16799232 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Listeria innocua # 4 594 3 591 593 710 59.0 0 MAQRNTFRDDEDLEEKINMRDLARVGVYLKPYMARVVWILIVVAAMGCINVVEPYLTKIM IDSVIPAKNLALLGELVALLAVLIVIYEFGLRYRTVEITRVGQLMLKDMRRDLFTHIQTL PFSYFDSRPHGKILIRVVNYVNTLSDTLSSGLVNVISDVFTFFITLVVMFVVDWRLALYS LALFPLLIAWVLGLQHFQRRAYQVLSNKQSNLNAFIHESIAGVKTTQTFAREDTQFRTFQ EQQGAVRSAWMRTVHIQTLMWPGIQTISVMTIAFIYYVGVTGFGGVDVTTGVLIAFVGYA NNFWNPVISIGNFYNQLITCSAYLERIFETLDVQPEIRNAPDAVDLPQIEGRVDFNDVVF RYEPDGRNILNLVDLHVEPGKTIALVGPTGAGKTTIINLLSRFYDVAEGSVTIDGHDVRS VTLESLRRQMGVMLQDTFIFSGNVRENIRYGKLDATDEEIVAAAKAVHAHEFIMELPDGY DTVVEERGSTLSAGQRQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLNHLLKGR TSFIIAHRLSTIENADEICFIDHGQIVEQGNHAELLARHGAYYRLYESQYAMIKV >gi|148337400|gb|DS264459.1| GENE 478 544880 - 546790 231 636 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 385 612 38 252 329 93 27 1e-17 MYVDPKRNQQAGNLAWILPYCKPDLPRVAGAVVLFCVNNTMALIIPLLSGLIVDRVITQG HVDELTRLCVMMLVLTVVRVGSRYGCQMWMERFGQNSIYRLVSDEFEKLHELDFTYFNHT RTGDVMSRMTSDTDAIRHALSWVSLQALDCVVMFIGALAMMFSIDWRLALALACVTPPLF ILTRGLSKHARPLFFDIRNSLAEMNSMVEENIEGNRVVKAFVRESYETEKFDERNDDYMQ RNMAQAYNSRKYMPWLDGLGFSLQLITLGFGGFLVIKGYMTLGNLVAFNSYLWMLDSPIR QSGWLTNDWQRFNAACIKIRKLLTAESRIREKPEFAGKATQSTTRVGTQGTQGAQAADKS ARIAGTIDFQHVDFAFPDDLGTPVLSDIDFHVPAGAKLGILGETGSGKSTLVNLISRFYD PTAGRVLIDGIDARDWPLATLRSQVCIVAQDTFLFSDTIGSNISFGAGDRSNRLEYNGQY DGQRRRRGYDEQYVRRMAAIAGADGFISSMPDGYDTVVGERGVGLSGGQKQRLSLARALA DNPSILIMDDTTSAVDMETEAEIQRHLRDLDEKKTIVTIAHRISSVKDSDLILVLEHGRI VERGTHDELVASHGRYWQIYSKQLGVDAGRSQGFEA >gi|148337400|gb|DS264459.1| GENE 479 547196 - 548284 892 362 aa, chain + ## HITS:1 COG:alr0079 KEGG:ns NR:ns ## COG: alr0079 COG0657 # Protein_GI_number: 17227575 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Nostoc sp. PCC 7120 # 73 222 149 291 411 76 31.0 8e-14 MTDLEHIRAKFAAEYGLSEDMLRNAERWTETTGDLEGVPENLLPGILGMRFGAIAIDTPR SERWSTPEDIDVIADLAYLPDGGYDTAAGACRGHLLDLYLPHDAVLRGGHTLPVYIDIHG GGFTYGYKELNRNFNVHLAEQGFAVFSLNYRPAPQTDLRGQLADIQAALRWIAAHMADYP VNPNAVFLTGDSAGGALTLLTLAIENNAEAAAAFGVDKPSGIRFAGAAPVCGAYSSASLE TMGRKLTVGYDPNRRIGLEQMLGVDFFAGLEAADPKFLTAEGLAFNVDLPPLLIITCGDD FLEADNLALAAALSRKGADFELFDPKPRRHETLGHVFVIGMPWLEESRECLDRIRRFSYE RC >gi|148337400|gb|DS264459.1| GENE 480 548358 - 549839 2083 493 aa, chain - ## HITS:1 COG:L140856 KEGG:ns NR:ns ## COG: L140856 COG0477 # Protein_GI_number: 15673485 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 45 470 4 427 433 320 44.0 4e-87 MTAVQTSNPVHDAEGAVEAGIHEVGATIDAVEREVGRGVSTRFPLNSAFIFTFGALGGML FGFDTGIISGASPLIESDFGLSVAQTGFITSSVLIGSCAGALSIGALSDRFGRKKLLILA AILFLLGSGMCAGSTGFLMMVVARIILGLAVGAASSLTPAYLAELAPKERRGSLSTLFQL MITFGILLAYASNLGFLGHNIAGIRDWRWMLGSALVPAALLLIGGLLLPESPRYLVSRGK DREAFKVLTLIRKDVDQTQVQLELDEIKAVAAQNTKGGVRELFRIARPALVAAIGIMLFQ QLVGINSVIYFLPQVFIKGFGFPENHAIWVSVGIGVVNFVATIAATLIMDKFPRKKLLIF GSVTMTIALAVLAVLNFTGDVATLAVPTMVLIACYILGFALSWGPIAWVLIGEIFPLSVR GIGSSFGSAANWLGNFVVSQFFLMLLAMFGNNVGGPFTIFGVFSALSIPFVLRFVPETKG KSLEQIEEEMVRR >gi|148337400|gb|DS264459.1| GENE 481 550431 - 552578 2447 715 aa, chain - ## HITS:1 COG:L0025 KEGG:ns NR:ns ## COG: L0025 COG3250 # Protein_GI_number: 15673962 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Lactococcus lactis # 80 572 38 457 996 79 23.0 2e-14 MLDIKRVLKAAPTKMRSREPLQQLWTPWGERIDHEWLSARAGNKAFNPAEEGERTLDEGR TPILGEHPRPTMVRDNCTMLNGWWDYAIASIPEDETAPKWRKTAAMLTRDEAVRAVKETA IPQTFDGKILVPFSPESALSGVHQTIYPDNLLWYRTVVHPVTLGGEETVRQIGDANRLIL HFEAVDYVCACYVNGQLAGTHVGGYLPFDVDISAFIDPDDAFEIALCVYDPNDSGTQLRG KQKIEREGIWYTAQSGIWQSVWLEIVPEAYLRTLTLKGASDGKLFVRAEIGGDKPNAKLH IVVTDPADGTVVADETLPAGVRKVRAEIATAAEHLWSPVDPYLYDVRAELRYGSAKPAET AGDAAVAQSQPMDVVSSYCAFRSVEIKPDTKGVARFHLNGKPLFVKGVLDQGYWPDGLMT APDDEALTHDITAMKNAGFNMLRKHIKIESARWYYHCDRLGMLVWQDAVSGGGTDGEYNA WTTNRKPTLIRSTWNKFRDDTAKHFTALGADDPIYRRDWSRTCDAMVHMLGGHPSIVTWT LFNEGWGQFDACDAAERIHALDPTRPIDATSGWYDQHCGDYHSVHNYFRPLEIYPDKGPL RGYVAEFEKKHRRRRRAAHYVVLPVARHGVRAFVISEFGGLAQLVPEHAAVSRAYGYGEY DSIDDWRAAVRSVLASAAALESRGLAGYVYTQVSDVEEELNGLLTYDRRVNKFAE >gi|148337400|gb|DS264459.1| GENE 482 552805 - 554667 2661 620 aa, chain - ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 3 590 4 600 610 759 62.0 0 MSHILVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEA DKEGVSAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEKVVQELFTQCLENGYIYKD TQKVAISPSTGRTLPDRYIEGTCPICGADGARGDQCDACGNELDPDELINPVSKINGETP RFEETEHFFLDLPALAEANLAWLKTREGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVP VKGWIDNPNKKLYVWFDAVIGYLSASIEWARRKGDPEAWRAWWNDPTTPGYYFMGKDNIT FHSQIWPSEMLAYNGQGSKGGETGKLGPLNMPEQVVASEFMTMEGKKFSSSRGIVIYVKD ILARYPVDAVRYYISVAGPESSDSDFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGE IPAFDEASATDEDRALLAETKAAFETVGGLIENHRQKNALSEAMRVVGDINKYISATEPW KIKDNPARLGTVLHTAAQAVSDANHLLAPFLPHSAQKVWEALGGTGVFSPLPHLEEVEDL DKPGFTYPIITGDYKLGETVHPWASEPIVAGTSVPKPHPIFAKIPPEAVEEELARFDAEL KARREAEAARLAAEKAKLEG >gi|148337400|gb|DS264459.1| GENE 483 554895 - 555449 290 184 aa, chain + ## HITS:1 COG:no KEGG:BAD_1536 NR:ns ## KEGG: BAD_1536 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 184 51 234 234 375 99.0 1e-103 MDTSPPLLGDADLPGPICLNRLHSLGVVCKLDNDNAYSYHDSRTLYGRASIISTLMPSRS VACAGTAAWVWLGGMFPNTIDIISKAHYRTARYGRKVSVFNRQAPDEHVTDVGPITVTTP TRTACDLAMNCTPETQSPVTEIVCMLMQEFRFRPDDCLQVMQEATHIRNAPRARQFFRTI DGKQ >gi|148337400|gb|DS264459.1| GENE 484 555725 - 555955 80 76 aa, chain + ## HITS:1 COG:no KEGG:BAD_1537 NR:ns ## KEGG: BAD_1537 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 76 91 166 166 145 98.0 6e-34 MACSADTAQDVLWHIAEYAPRLRKWLVANPSATPAMLEYLAQVGGPGVPEALRILLKSLE MNGSGSDQPFIASTAL >gi|148337400|gb|DS264459.1| GENE 485 555925 - 556986 1302 353 aa, chain - ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 56 352 3 280 282 212 43.0 8e-55 MENLSEQTDAEKAGNAVKQTVKTNIGQIAEIGENAENAEETAQATERAEFGLDGLVADVN IPRGTVVLAATPIGNTGDASARLIALMEGADIVAAEDTRRLYALANRLGIRVPGRVVAYH DHNERDKADGLLDQVEQGATVLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVL DALCLSGLPTDRFCYEGFLPRKHSERVQHLRALKSERRTIVFYETLHRIDESMADLLDVL GPNRKMALCRELTKDYEQIRRGTIAEIRQSVVDDPPRGEMVLVIAGASEEEADAAAPATL SIEDLAVLSVDRAQEDNLRIKDAISQVVAEHPLSDGSLANRKQVYNAVLAMKG >gi|148337400|gb|DS264459.1| GENE 486 557271 - 558140 799 289 aa, chain + ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 29 273 31 272 272 240 46.0 3e-63 MRYFEDEISGIDGSTATFVGYCLDNSSEIDPNRKRPSVLVIPGGGYEMTSDREAEPIAMQ FLAAGFNAFVLRYSVKPSIFPVALLEAAEAMRRIRTHADEWHCDADAIAMIGFSAGGHLA ANLATSASDDVLAAHGYDADAVRPNGLMLAYPVVTSGPLAHRGSFDALLGDRKADPEALD AVSIEKHIDAKTPPVFVWHTVPDDCVPYENTLMLVDACKKAGVSVEAHLFPSGGHGLSLG TAETAWQGVNGIEPCVQVWPELAITWMRRTFADTDAATTGSATADAIAE >gi|148337400|gb|DS264459.1| GENE 487 558365 - 558514 63 49 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|154489140|ref|ZP_02029989.1| ## NR: gi|154489140|ref|ZP_02029989.1| hypothetical protein BIFADO_02454 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02454 [Bifidobacterium adolescentis L2-32] # 1 49 1 49 49 86 100.0 6e-16 MVVRQLSSVLSGCPVRPARPASAWGTPANPGLNSLYYGDRQMVHESRPI >gi|148337400|gb|DS264459.1| GENE 488 558744 - 559445 178 233 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154175107|ref|YP_001408238.1| ribosomal protein L22 [Campylobacter curvus 525.92] # 24 220 9 198 199 73 30 2e-11 MNIINFFVNLIKDPRTAIASWIAMGVAPTLGFIFLIVFIETGVVFFPFLPGDSLLFAAGF FAAPDAQTGVSALPLFALLPVVWCAPIIGDQCNYWIGHFFGRRILESGKVKAMTPERIEK TEKMIEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRFTPFSVLGGLCWSTLFTLLGY FFGGIPAVQKHFELVIIAILVLSLIPTIVGLLKAKFGKKKPAAEDTAETADAE >gi|148337400|gb|DS264459.1| GENE 489 559453 - 559575 84 40 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCVTLFSKTTLEILVRSVEKCNSTLRVLCLRCIRRYFYDD >gi|148337400|gb|DS264459.1| GENE 490 560075 - 561316 1186 413 aa, chain + ## HITS:1 COG:FN1382 KEGG:ns NR:ns ## COG: FN1382 COG1373 # Protein_GI_number: 19704717 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 5 406 3 402 402 260 37.0 4e-69 MSTYRREHYLAKLRPFYNDSGLIKVIAGIRRCGKSSLLITVLNELFEQGIPETNLIYLNL DRREYRNVTTPDQLDQLIEQAMSNAYGAGLRYLFIDEVQNVKGFETVINGWREEGNCSIF ITGSNSYLLSGELATKLTGRYIKLEMFTLSFQEYLGMRNFLNKPEIPVSQAFRDYLTYGG FPKSLEYDDPDEKAAYIQDVIGQIFNKDITAHKKVRNRDTFTRVQDYLINNFAAPTNLSG IIAYLKHSEGISIKRETLASYVRLLESAKILYKCPRFDLKSRKSLRGGEKYYLADPGIRF TRNTDTRVSYGPSLENALYTHLRSKGYDVSVGTIGKLECDFIVRKRNQYAYIQVSMSVQD PQVEEREYRPFSKLADGYPKYLFTLDPLPLQRDGVRHLNLMEFLQNDGDIDFD >gi|148337400|gb|DS264459.1| GENE 491 561387 - 562109 865 240 aa, chain - ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 19 234 1 220 231 97 29.0 3e-20 MTELNNGIQNGAQEVSKLMLKAVFWDMDGTLIDSEPYWHEGELKIAADHGGYWDEDLAWQ GSGTPVPDVARRMVEHGCKLSIEEIGKGMIDYVAQKEFERIPWIDGVEDVLLSLKEAGVP SMLVTTSPRHLAENLIAQAPAGTFAGYVCGDDDVEKKPSPAPYLAAGRKLGIAPEDMKYC IAVEDSMSGLRSAAASGATTLGQTGFMRIDNSNGPQFASINGYDGITAATLDAYVRSRNA >gi|148337400|gb|DS264459.1| GENE 492 562473 - 562745 400 90 aa, chain - ## HITS:1 COG:no KEGG:BDP_2176 NR:ns ## KEGG: BDP_2176 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 20 90 1 71 78 110 90.0 1e-23 MPRVAFTAKTRKYLGSLDAVESVTQYRICYSKEFRDDCMRRYAEGGSPAAIFREAGLDPK IIGYKRVERCIARWKAENAEKAAQEQEAQE >gi|148337400|gb|DS264459.1| GENE 493 563038 - 563574 476 178 aa, chain - ## HITS:1 COG:Cgl2737 KEGG:ns NR:ns ## COG: Cgl2737 COG0789 # Protein_GI_number: 19553987 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 22 142 18 141 146 92 47.0 3e-19 MCAMAIVAGRADLDGAAEVGFDIELPVFSVGAAGELANVHPQTLRQYDRLGLVVPQRTEG GARRYSLRDISRLAQAQQLSQEEGINLAGITRILELEEENRELRRQVERLRKPAGSSVFA ADADGGIVEVERSQRARMWRRQLRADARQLPSRESVRAERAEEGDDMGSRSVVVWGIR >gi|148337400|gb|DS264459.1| GENE 494 563652 - 564677 1642 341 aa, chain - ## HITS:1 COG:slr0093 KEGG:ns NR:ns ## COG: slr0093 COG2214 # Protein_GI_number: 16331768 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Synechocystis # 9 320 7 306 332 159 38.0 7e-39 MAENEWLSKDFYKVLGVSKDATDAEITKAYRKLARKYHPDLNKTKEAEEKFKDISEAYDV LSNKENRQKYDAIRQFGMGGARFAGGSGQGGFDAGAFSDIFGSMFGGGAGMGGNGSRIRF QTNGGGNPNLNDIFSMFGGGAGGPGAGSAYERYGADDYEQPQPENGEDRNSKIRLTFRQA VKGATVSLSTDGKKFKTHIPAGVHDGQKIRLTGKGKPGRNGGKNGDLYLHITVAEDPKFT LRGRDIIMPLPITVSQAVNGAKVTAKDIDGNEITFKVPAGSSSGAEVRIAGKGVANPHEN GDLVGRVEIRVPEHPNLVAKHAAKEFDKACGDFADELVRER >gi|148337400|gb|DS264459.1| GENE 495 564852 - 565538 888 228 aa, chain - ## HITS:1 COG:ML2495 KEGG:ns NR:ns ## COG: ML2495 COG0576 # Protein_GI_number: 15828349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Mycobacterium leprae # 69 223 36 188 229 84 37.0 2e-16 MSDFNKDEYLNDLPDMDDLSGQAAPAAASAADGASADSAAAAAGATQEGAAQPAAAQSQE NGDSAAADGADKADAADGKADDTLTPLGQAKKEAAEYLEALQRERAEFINFRNRAQKEQE RFRQHGIIDVLTALLPALDDIDRIREHSEMDDSFKAVANKIDKAFEKFGVEKFGEKGEDF DPTKHDAILHKPDPNAEKETVDTVVEAGYRIGDRVIRAARVVVASPQN >gi|148337400|gb|DS264459.1| GENE 496 565541 - 567424 2755 627 aa, chain - ## HITS:1 COG:Cgl2740 KEGG:ns NR:ns ## COG: Cgl2740 COG0443 # Protein_GI_number: 19553990 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Corynebacterium glutamicum # 1 626 1 613 618 758 69.0 0 MGRAVGIDLGTTNSCIATLEGGQPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVT NVDRTISSVKRHMGTDWTVEIDGKKWTPQEISAQVLMKLKRDAEAYLGEPVTDAVITCPA YFNDAQRQATKDAGTIAGLNVLRIINEPTAAALAYGLEKGKEDERILVFDLGGGTFDVSL LEIGKDDDGFSTIQVQATNGDNHLGGDDWDQKIIDWLVGEVKNKYGVDLSKDKIALQRLK EAAEQAKKELSSSTSTSISMQYLAMTPDGTPVHLDETLTRAHFEEMTSDLLGRCRTPFNN VLRDAGISVSDIDHVVLVGGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGV IKGDRKDVLLIDVTPLSLGIETKGGIMTKLIERNTAIPTKRSEVFSTAEDNQPSVLIQVY QGEREFARDNKPLGTFELTGIAPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTI TGGSGLPKDEIDRMVKEAEAHEAEDKKRKEDAETRNQAESFAYQTEKLVNDNKDKLSDDV AKEVTDKVNELKEALKGEDIEKIKSAQSELMTSAQKIGQALYAQQGAADAAGAAGAAGAG AAGSASNGSDDDVVDAEVVDDDDKDNK >gi|148337400|gb|DS264459.1| GENE 497 567691 - 569790 2939 699 aa, chain - ## HITS:1 COG:PA3296 KEGG:ns NR:ns ## COG: PA3296 COG1785 # Protein_GI_number: 15598492 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Pseudomonas aeruginosa # 10 520 8 474 476 343 46.0 7e-94 MSKHKALKGAIAAVASVATLGALAAPALAADTTYSPNGKSVAELAQHGGAQRIAAIGNKK AKNVVLFIGDGMGDSEITVARDYLKGANGHFDGLDAVGQPSALGDVQAGTGQYTTFSVGN GSKDSAVGKDGDGKLVANPNPGKLTPVTDSSASGSAWATGTKTYNNAVDVDIYGNPQLNL FELAKAAGKATGNVTTAEIQDATPAVLESHSSERACYGPQGKTDGTSNNASKQCLINQLK ENGGIGSISEQLLDTRADVTIGGGSKYFRQTVQGGEYKGKTVWEQAKEMGFQTVENDPAA MNALQYKDNQPVLALMSDGNMPTKFDPSKATAKDPAKDANPTVCTPNANWLGNQGSSLKD MTKKALDLLNDNPNGQKNGFFLQVEGASIDKQDHAGNACGQIGETDDFDQAIAYAMQNVD LTNTLVIVTADHAHTSQILNAQPAYALSTVLKTADGNNMVVSYGTAQDDSRDADGGYNGG DMEHTGTQLRIAASGPGAQRVIGLTDQTDNFYTIAGALGLATSTESQKALSDNGTVKVSA ADGKFTADVDGFNGDAVLSYELKDKNDKTVAASDSSTPLSGVRVKTAQTTPIALDGVTEG SEYKLTVTGRQSGKAVTVDFQAPAANSADKNNGKPGAGNADKNGVIASGKVNNDTKAGPF GAALLGKTGTAVLAAAVAIAMLVAVAMLIKTAKAAKNDR >gi|148337400|gb|DS264459.1| GENE 498 570263 - 571141 723 292 aa, chain - ## HITS:1 COG:BH3454 KEGG:ns NR:ns ## COG: BH3454 COG0730 # Protein_GI_number: 15616016 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 39 213 5 203 273 72 30.0 1e-12 MCDEGETADRADAVRTESQKMKSRAGETALDGSARSIIVLIVVGMLVGVLSGTFGIGGGT MIVPALVWLGLSQRNAAATSMLAIVPTSISGVISYATGGHVDWLAAALLFCGMFIGGQIG SWLLSRLPELVLRWIFVAFLVFVVINQVSFVPSRDHQIVMTVVTGIGLALLGVVIGTLAG LLGIGGGALAVPSLSMLFGASDLVARGTSLLAMFPNSITTSAANLKRRLAHVKTALIIGV TAAVTAPLGTWIAGEVSPRVGAIMFACYLCVLLVRSVFVAVKATRAARAARG >gi|148337400|gb|DS264459.1| GENE 499 571308 - 571808 337 166 aa, chain + ## HITS:1 COG:no KEGG:BAD_1550 NR:ns ## KEGG: BAD_1550 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 166 1 170 170 182 93.0 4e-45 MAAPCGNKTSRGYACYPLTTYCPNRPATYKRDTTGRPAKSAIYKPDIQPKPRPHAYTGTP ARLHPRKTHCTHPRTHTTARGPAKSQVMSEKGHQKRPKQAESHPHPLTDKQNQPNSQVVS KKGGHPTSKQPETSRIVPPSAHNRAKTVKIASHEQKGHQKRPKQAE >gi|148337400|gb|DS264459.1| GENE 500 572047 - 573030 1030 327 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 53 261 1 211 279 185 44.0 9e-47 MTDESDAKSAAQVELDAQVKPGAQVKPAAKHKKSNALLNVMIAISAIAMIGALGLIAYPT FSDWWNRMHQSYAVAGYVEQTKDMSGAERKAMLKAAHEYNERLAANGDRWHMTDAQKREY DETLDVTGTGIMGYVTIPRIKVKLPVYHGTSDGVLQIAAGHLAGTSLPVGGATTHAVVSG HTGLPSARLLTGLDELQKGDTFAFHVLDETYTYQVDQISVVLPSEISKLNIESGADYATL ITCTPYGVNSHRLLVRGHRIPNPKVPDKTQYDEPGEMTAVAAAVIGLLVFVAGCAFVGLA RLWRRSWIVRHGLCAGAGARHSSGVRG >gi|148337400|gb|DS264459.1| GENE 501 573041 - 574078 880 345 aa, chain - ## HITS:1 COG:no KEGG:BAD_1552 NR:ns ## KEGG: BAD_1552 # Name: can # Def: collagen adhesin precursor # Organism: B.adolescentis # Pathway: not_defined # 1 345 13 357 357 527 97.0 1e-148 MKERTIASRVIAACCAIAATFAAAACALHTRDAVAAPTTDSASGSIAISYQHKSSDSETG SDSTDFAISDASFNLYKVGQIPASGGATFEPVAPFTDSTAYPVDWSKMTGKDAQVWRDMA NTLAGLIAVNKPDATATGVTNASGHLTFTGLSDGLYLAVSDSVDVKVTNASGKNQTWTCS SGSMLVAVPEDGVSGGSRVLSIEPKTECVAQPPKTVERTVRKIWNDRNNSDGKRPESITV KLLRDGEPVENVKLNESNKWTHSWTDLDADHEWTVVEAAVPDGYTTISDVEGDSTEITNT HTPPTTPDQPHTGADVQQAAWIAVAILGAGLVLLIVAKTALRKRA >gi|148337400|gb|DS264459.1| GENE 502 574353 - 575918 1392 521 aa, chain - ## HITS:1 COG:no KEGG:SGGBAA2069_c21750 NR:ns ## KEGG: SGGBAA2069_c21750 # Name: not_defined # Def: backbone pilus subunit # Organism: S.gallolyticus_gallolyticus # Pathway: not_defined # 5 521 1 479 480 276 43.0 2e-72 MNKVLKGLVAVAATAAMAVAGFAGASTAMADDPTGGIAVEANDTHTYSVYQIFTGTYGSD GSLGNVAAGQNFKTANGAGDGGTNLSVADAAKKVAGLESSASDSMKLETINKFVDLTGDA YGTVSAAAQLSKVPAGYYLAKDKDTVTGNDAATLYIVKVVGNEVVTIARKADKPTFEKKV QDANDSEGTTTGWQDSADYDVNDTVPFKLTATLPTDKDDFAAYKTYKLVFRDTQSAGLTY PEASGFIVKYEETVVPASQYTLTLNPTTTTADSTFTLTINDVKSLTDSEGQAIAVAEGGK FTVEYASTLNKNAVIGSAGNPNEAKLEYSNNPNYTGDGAGSPTGETPKDKVIVFTYQLNV NKTFDQGDPAESDMPKFTLYKKYKNGESEEWNKVGKEIALTRGGTEGHFTYTGSFSRIDD GEYKLVETHTPAGYNTAADTLFTITADHDVLSDNPALTSLKINQTDGDKTNGTVQADVVN KKGSNLPSTGGMGTVLLYVAGIAVFVLAGATLVMALRRRNA >gi|148337400|gb|DS264459.1| GENE 503 576041 - 578416 2068 791 aa, chain - ## HITS:1 COG:no KEGG:BDP_2191 NR:ns ## KEGG: BDP_2191 # Name: cna # Def: cell surface protein # Organism: B.dentium # Pathway: not_defined # 228 791 787 1324 1325 139 28.0 5e-31 MKKGASLEWSKVDGSGPSKVLSGSEWQLTTSDGQTAYQITDSTKSVESVKIYYNGADSPE SIMMKDGIPFDLTASVFGTDNKTDGVPQGVAWTATGSVVVDDNGKVTAVNDGDGTVTACS LAAMNICATVNVTVPTGTIIKPTPKNSTTFYFKADGYTFGNTKLHYSFTPDDTSSWKDAV MTSAEGCTGYLTVTIENPDLKAVTYLFYQGSNWYHKDNSPDGNFATDANQTVATVENYKA VSTAPSGCSTGGGSGSGGSTTTGTVTISGSTEVGLNKSIKLKATTDPANDTITSWSSGDT SVATVTSDGKNATVVGRKAGRSTITVVTSSNAMASVTITVRDDSTINVYFQKSTVNWKEY YLHYQPKTGTNWPAVKMTDAGDCSGYVVASIPKANVAANHGYYFRNGNSPNSDGWYNSNG QNAEGDPFKFWSGTYTDMYVNTNSDKQPTKPKSCQFASSAAKVRARVSTAVLKSSKTDVI AVNDAEGSGTSAAPIVYSCGDAKGKCDMDTRAGYFKVVDLEDGTYTLTEMVAPNGYSIAG PYTVTITTTNGVTSVSIKNANGGSIANSKIPNTRNTGTISWNKVSSDSNNGKKLSGSEWK LTKTKNFGWNATTGKAEYADIASDQQKPIAITDCVPAENKAAAETTCSAPAGAAEGRPYD VDPAAGQFKLKGLEWGTYTLVESKAPDGYDVDSTVRKFTFGPASGSDGTGQWNSNGVASA AGDATGNFTTSPANYDSSVFNFSVGDIKNQPGVVLPATGGTGNSWIYATAMAVALIGVVA AGMALKVRRRQ >gi|148337400|gb|DS264459.1| GENE 504 578471 - 580351 1571 626 aa, chain - ## HITS:1 COG:no KEGG:BDP_2191 NR:ns ## KEGG: BDP_2191 # Name: cna # Def: cell surface protein # Organism: B.dentium # Pathway: not_defined # 1 622 25 663 1325 253 34.0 2e-65 MATVAVTSLLPTYNAKADTSAEPGICTPQSISLGDDVSASTVDSGVATYVGGNMYVGANN QNNGGTYADLSSTQKIDKSYAVEAEGLTLVNGKLATNGAKTSWNSKGFRFGVVGFGAQFR PKSGSDVLVVAGNNTSNTGNSTGKMWDADELSKSVSALGGFDNGSTGRAFVQNEGTGNNV TWYSARINGNTSWHLNADKNSSGSNAGRSVWDATATVDADGNKYTNVKFDSVGLNSVKLN DATKDYSTFYADNVLGLSKQLAGLQKSEGVYVADAKVGTAEASQTSTTSATYSDGYYMRH HYNYDGTKNKIQYGFKFDDSGSNAEKLITFTGDADSAGKGSAMQVFNVTADQLSSSGYRG VDFMFTNIPNDASVVINVSGNVDFHTGWRFWWNGLEIGDGYSKAATTDQKTAYSTAAQKI MWNFKNATQVTIRGGVANEGASDNKKTDDDPAAAMLGSILVPNGNFEDHVTTNGRVYVGG DFSMYNPTVAADVAGVNSNGWEGKTASVINMDQERHNLPWNGTFNSSCAVIQINKVDSSK NKLAGTTWGVFKNYADAKAGANALRVVKDGGAFDLDNVDNGTIQIGSLNPEATYYVKEIT SANGYQVSDKVYRITAGAGGSTVQNV >gi|148337400|gb|DS264459.1| GENE 505 580679 - 580816 110 45 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489161|ref|ZP_02030010.1| ## NR: gi|154489161|ref|ZP_02030010.1| hypothetical protein BIFADO_02476 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02476 [Bifidobacterium adolescentis L2-32] # 1 45 1 45 45 72 100.0 8e-12 MKQKEPTPPPPIRFFVPSHGDNALKPDIQRFVNDCKIKKHMLIIE >gi|148337400|gb|DS264459.1| GENE 506 581008 - 582036 1256 342 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 3 337 4 327 332 132 30.0 1e-30 MDRAGIREVAKAAGVSISTVSRAFTRPELVSERTRRKVLETADKLDFNISRSATSLKSGQ SYRVAMLMNEEITSWFNTEVFAGIESVMHNAGYDVSLFQHVDTAENRKEFFTNLPVRRNV DAVFVTSFGVDPKEIQQLKRIHVPIIGINTPTQNGFDATISIDDEDGMFTAAQHLINLGH KNIVYVCSDAVDSINSSIDARGQGFIRACKTMEASHDFKWRVVSVSRGKTFADSALTALL ALDEFPDAICCQMDMMAIPLVLRLERYGHHTPSDYSIIGFDDSPYADTVSLTTMRQDPYA MGRAAAQKAMKLIEGEPLENAHEIVRAQLVLRGTDSVYGTGR >gi|148337400|gb|DS264459.1| GENE 507 582157 - 582963 600 268 aa, chain - ## HITS:1 COG:no KEGG:BAD_1557 NR:ns ## KEGG: BAD_1557 # Name: not_defined # Def: putative ABC transport system membrane protein # Organism: B.adolescentis # Pathway: not_defined # 1 268 15 282 282 451 87.0 1e-125 MESYAEQGAGADSIEQIGFGGARRTKKKHRGLTVFQLKVIGAVALALSAGSTTIVPLFFG SDVNNMTSLTAMVLSEVISWFAIPIYAWLLVQGFRETHSRVAYGLRLFILAVVCEVPYDL CTSHKAFDFGSQNPVFGLFIAFVVLVVLDWVAARYQKSMKIVLSVGLVLIGLLWDLLLRV GLRQHMMSVGAVTLGFVLIFTLMRQHENSMMFTAGLFGAVMMIMPGIGVAFVHYYNGELG YKRQWTKWAFYAAYPVILIFCAIGATLA >gi|148337400|gb|DS264459.1| GENE 508 583042 - 583824 644 260 aa, chain - ## HITS:1 COG:MA3051 KEGG:ns NR:ns ## COG: MA3051 COG1011 # Protein_GI_number: 20091869 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Methanosarcina acetivorans str.C2A # 6 226 3 211 217 70 26.0 3e-12 MGAGAHNPRYEVVFFDLYGTLIDIRTDEQSETAWQALYDCVCELGADYESVDEMRERFEK LEAREMVHQADRAIVRNGWDEFDILPVYRSLLMNRSEEAEKKLALPQAALKAAWAFRQGS TSMIRLYPGALDMIEALQEAGVVVALLSNAQACYTRPELEMTGLANVLDDVIISSEEKIR KPARDLYMLALDREFVIAKNALMVGNDEANDIIGANSAGLDAAYFRTEISPMSDPPKSEH AVCSFTGADYDGLLKFVLNA >gi|148337400|gb|DS264459.1| GENE 509 583923 - 585977 2023 684 aa, chain - ## HITS:1 COG:CAC2679 KEGG:ns NR:ns ## COG: CAC2679 COG1523 # Protein_GI_number: 15895937 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Clostridium acetobutylicum # 26 593 95 614 720 385 36.0 1e-106 MTLVDSFAQPNTSVAEPFPLCLERPLGAVVTETGTQFALWAPSAQKVTLRLFSRGSMGES GDALIGQYTMRPESDGSWTYDFADNMHGVYYDFLIERDCGSVDRIADPWARGAGVNGRRS MVVDFSRTNPDGWYRDHMPDVPLAQTVVWETHVGDFSNDPAGGFPESHRGKYLAFTDDGT SLDGHPDFPTGIAYLKKLGVTAVQLMPIYDFGSVDEETCDRYNWGYDPVNYNVPEGSYST NPFDGSVRIREVKQMVQALHNAGIKVIMDVVYNHMFSPDNWFERSVPDYFLRRKPNGALA NGSGCGCDMATERKMFRRFIVESVTFWAREYHMDGFRFDLMGLIDVDTMNAVRAALDEIP GRGRDILMYGEPWSAGATAPLPSDTVLADKSGLSKLDSRIGHFCDTTRDTIKGHVFFSDR PGYVNGGMHENVAAAREAVDAWRRGKHSEGVAGQVIQYVSAHDDLTLWDKLCASFAAGSL GSTVAEGVNENTVDVPKVMYDADFSAEGLAGVGPQIAAALTDVMDANKLAVGITLTSAGI PFMLSGEEFARTKFGSSDSYDSAKELNWLDWNRAWQKRDLIEYYAKLIALRKSDPQWFDG NRNIVDTEGDELVFRVGDYLMAANPGRHVGVIDVAVTGLEPIGGIRRYWCGLGSSVSPVE GNVSAGDGDYLIVPPHTFAIWRLQ >gi|148337400|gb|DS264459.1| GENE 510 585996 - 586895 1229 299 aa, chain - ## HITS:1 COG:SPy1296 KEGG:ns NR:ns ## COG: SPy1296 COG3833 # Protein_GI_number: 15675249 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type maltose transport systems, permease component # Organism: Streptococcus pyogenes M1 GAS # 34 295 16 274 278 239 49.0 4e-63 MSNKHSATKVESHGLLHDQKIRRITGDVFAHLFLAILAVIWLVPIVWVFAESFNKNTAPY TSSFFPKEWTLDNYRVLFTDRNVLDFPKMFGTTFIIACFTCAISLIFVLSVAYCMSRMRF RVRKTFMNVVLILGMFPGIMAVTAIYFILKALGLSSGTMTTVALILVYSAGSGAGFYVMK GYMDTIPTSLDEAALLDGCTRFQVFHKIIIPICKPMIVYQAIIGFLTPWLDFVMAKVICR TQSNYTVALGLWLMLQKEYIQNWFARFAAAAVVISVPIAILFIVMQRFYQESMSGSVKG >gi|148337400|gb|DS264459.1| GENE 511 586892 - 588160 1611 422 aa, chain - ## HITS:1 COG:SPy1295 KEGG:ns NR:ns ## COG: SPy1295 COG1175 # Protein_GI_number: 15675248 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Streptococcus pyogenes M1 GAS # 1 420 29 452 453 333 43.0 3e-91 MFGLGDIVRKQYVKGIAMLALEIAYFVFMAINGVDYLSKLPTLGTNAGGKKLVDGFWVYT EPDRSVVILLYGVATLVITAAFIGLWVMSVRSAYKSQVLLEENGKAPSFMDDVRELLDAK AHVLLMFLPTLGIVVFTVLPLIFMISMAFTSYDHKHLVLFHWVGFENFAKVFSNSGGTVN AVLFGRVLVWTLVWAFFATFLNFFLGMFVAMIINRKTTHFKGFWRACFSMSIAVPQFVSL LVMHTMLQPQGAVNRMLQTWGWIDGPLPFFTNATWARVTVIIINLWVGIPYTIMQITGIL QNIPADQYEAAKIDGANWWQIFTKITMPYIIFVLTPYLITTFTGNVNNFNVIYLLSGGDP TPLGDSAGSTDLLITWLYKLTVDKQDYNLGAVIGIMTFVVLAIVSLITYRNSGSYKNEEA FR >gi|148337400|gb|DS264459.1| GENE 512 588537 - 589781 1703 414 aa, chain - ## HITS:1 COG:L128695 KEGG:ns NR:ns ## COG: L128695 COG2182 # Protein_GI_number: 15673665 # Func_class: G Carbohydrate transport and metabolism # Function: Maltose-binding periplasmic proteins/domains # Organism: Lactococcus lactis # 5 406 4 399 410 116 28.0 7e-26 MKIDWKKAIGLTAAVSMLVPLAACGGSSDGGDKNASGSTEAVTLSVWAPQEDQAKDTNWL GKVEENFAKAHPEYNITWKNDVVSEGDASKQVSTDPSAAADVYMFASDQLGVLMDAKAIG QLGTDAEKQVKEQNGDLEVNSVTGTDGKLYGVPYTDNTWFMYYNKSKITEDEAKDFDTIL SKAKVAFSLQNSWYINGFYDGLSLFGEKGNDADAGMVFPKDGADITSYLVDVVANPNFSN DDGASGLAAIKDGSADVLFSGTWSAKDVKEALGDNYAATSLPTFTVNGQKKQMKSFAATK AAAYNPNAKNPKAAAQFAAYLGSTEAQKLHYEMRAIPPTDKSLSDLTTDDIAAKAQADTM ANTALLQSGLSGMNDWWTPAETFGKALVNKEITKDNAAAKYQDWVKQAGGKIAE >gi|148337400|gb|DS264459.1| GENE 513 589965 - 591650 1345 561 aa, chain + ## HITS:1 COG:BS_yvdL KEGG:ns NR:ns ## COG: BS_yvdL COG0366 # Protein_GI_number: 16080509 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Bacillus subtilis # 29 528 3 523 561 207 30.0 4e-53 MIVSKKHRKPRNIKETHPHASPAKHPHPKWLADAIFYEIYPQSFVDSNGDGIGDIPGITL KLDYIKDLGCNAIWLNPCFDSPFKDAGYDVRDYKKVASRYGTNDDLIALFDAAHRRDMHV ILDLVPGHTSEEHEWFHRSCKVERNNYSDRYIWTDSWISGGDGLPFIGGESPRNGTYILN FFKCQPALNYGFAHPERSWQKPALGPDAKATCDAMVDVMRFWLSRGADGFRVDMADSLVK KDDEGKPYTIRTWQYMFARIRPAFPEAAFVSEWGRPEESMAAGFDMDFYLDWRWDGVPNG YNMLLRNVDDPLSRKGDKSYFNADSGTPISEFLDEYEPRLREAETADGNFNFITCNHDTA RVAPRLSQREIALAYCTLFAMPGVPFLYYGDEIGMRYRALPGKEGGYVRTGSRTPMQWGA NDASGALHVSDSAESDTRAGDVTGGSYLPADPSADAPTVAAQQADAESLWHTVRSILHVK GECDALRSGATFHAIERDRVFVFERSTHLQKLIIAVNPSRDCKALQLPDGSYRTIFSIGE NEISGTSLRLGLQSFAILEAE >gi|148337400|gb|DS264459.1| GENE 514 591937 - 594105 2603 722 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 13 715 4 710 724 490 43.0 1e-138 MTQTQQTESAERIARPLIQLAKLNGISTSYIDQLGTYVEIRDEVLVSVLAALGVDASSDE AITASYAATQQRIADTLVEPTVVKFIGKEAVTPIRAKGNDVALKLTLEDGTEYAGDLTAY LTGSNADDGSLQLTLPDDIPAGYHTLAVDAGPMHAEAALICAPARIELPPAVAEKQRWGW MAQMYSIRSAESWGVGDYGDLKLLLSDAATKSHADFMLINPIHATAPVPPLEPSPYLPES RRFLNVTYIRPQDIAEYAELNEADQAEVARLHAEVSPANDSIEPLDINSAWWHKRQALQL VYNVPRSVERQAAFDAFKEAAGPDLRAFAAWSVAFQVWGAPWEGTWFKDTNRDSPEVVKL MREHADMVDFECWLQWIADEQVTAAQNAARDSGMALGLMQDMAVGVHSLGADVWWNPERF AVGSVTVGCPPDFYNQQGQDWGQPPFNPNYLAKTGYGVYREMVHNMFSHAGAVRIDHVLG LFRLWWIPQGEGARGGAYVTYDYEAMIAILTIEASRVNGLVVGEDLGTVPDYVRTVLGEH GLLGCMVEWFARVDDSPNAGDPYADPSTYRKYALASVTTHDLPPTAGYLQFEHVKLREQL HLLSGPVEEFQASATAERDAMMDRLVESGLITPEVAGDVEGHIQEIVEAMHKMLLKSPSV LLQAALVDGVGETRTQNQPGTSSEYSNWRVPLAGPDLKVVHTDEVFDLPRVQSLAAIMNG EK >gi|148337400|gb|DS264459.1| GENE 515 594222 - 595970 2026 582 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 6 580 27 546 546 357 41.0 3e-98 MTANNMRDDWWKQAVVYQIYPRSFKDVNGDGLGDIAGVTEKMDYLKNLGIDAIWLSPFYP SDLADGGYDVIDYRNVDPRLGTMADFDAMAAAAHEAGIKVIVDIVPNHTSNKHKMFIEAL AAGRGSAARDRYIFREGRGEHGELPPNDWQSLFGGPAWQQVDDGQWYLHMFAKEQPDLNW KNPDVHEEFKKTLRFWSDHGTDGFRIDVAHGLAKDLDSVPLADMDPAAVQHVLPADGAFS PLWDRPEVHDIYREWRQVFNEYNPPRFAVGEAWVKAESQHLYASTDELGQVFNFEFAEAN WFADEFRTAIADGLRAAEETHGSTTTWVMNNHDVPRSPSRFGLPQVKDAPYHQLAHDWLL RDGETYRENRELGTRRARAAALMELGLPGSAYVYQGEELGLFEVANIPWDRLEDPTPFNT RRNFTDKGRDGCRAPMPWKAADCGEPASWSPDFITGGTFGFGPEQGDSADAHLPQPAWFK DFAADVEADDNGSMLHLYRKLLQLRQTVLTATGDTSADLLDMGDTVVAYSRPATEGRRFL SVTNFGDEPIALPDDAVAIANSVPLTDDGKLDSDASVWLLLG >gi|148337400|gb|DS264459.1| GENE 516 596342 - 596944 828 200 aa, chain + ## HITS:1 COG:no KEGG:BAD_1562 NR:ns ## KEGG: BAD_1562 # Name: not_defined # Def: hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 200 1 200 200 352 96.0 5e-96 MKFLSPDSGFMRGLSDAVDAIWINILMLITSIPIITIGAALTAGHDATRRTLSGEGTATR NYFAAFRSNFAKSTGYWLIFGTTGALCVYSWIVLQITPLLIPKFALTIVWLIGFEWVWAL QARFENSFWRTLGNAFVFGVSNIGHTLALIAIDAVYVALLVASWFYMPQGLFLLLVLGYG TMLMLHSPILEHVFRKYISK >gi|148337400|gb|DS264459.1| GENE 517 597144 - 597986 1152 280 aa, chain - ## HITS:1 COG:Cgl2406 KEGG:ns NR:ns ## COG: Cgl2406 COG0395 # Protein_GI_number: 19553656 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Corynebacterium glutamicum # 16 280 39 304 304 249 51.0 4e-66 MNSGEKVKHGALWSVLFAVVSLAWIFPIVLVIINSFKQKAYISRNAFSLPTGKAFVGLEN YTRGLDTTNFFASFGWTLLITVGSVALILVCTSMCAWWIVRVNNWAAKLLYTLFLFNMIV PFQMVMFTLSKLADMLKLNTPWGLCFVYLGFGAGLAVFIFTGVVKGIPESLEESAMIDGA SVPRIFFQIVVPIMKPSIVSVAILQAMWIWNDYLLPYLTLDLGKYKTISVAVQYLKGGYG SVDMGAMMACLVMAIIPIIIFYLICQKYIVKGVMAGAVKG >gi|148337400|gb|DS264459.1| GENE 518 597983 - 598738 975 251 aa, chain - ## HITS:1 COG:Cgl2407 KEGG:ns NR:ns ## COG: Cgl2407 COG1175 # Protein_GI_number: 19553657 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Corynebacterium glutamicum # 1 251 30 281 281 246 49.0 4e-65 MGVYLSFCKFTTVTDSEFIGLKNYQKALADKEFLHALGFSTALTIVTTVVINVVAFAIAY MLTKAIKGSNIFRSVFFMPNLIGGIILGYIWMLLLNGILAHWGRALTYSATYGFWGLVIL VCWQQIGYMMIIYIAGMQSLPTDVLEAASVDGANGTQTMFKIIIPLMMPSITVCSFLCVT NGFKLYDQNLALTNGAPSNMSEGLAMNITRTFYGRMGWEGVGQAKAVLFFILVAIVALIQ NKLTTSKEVEA >gi|148337400|gb|DS264459.1| GENE 519 598683 - 598943 85 86 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|154489177|ref|ZP_02030026.1| ## NR: gi|154489177|ref|ZP_02030026.1| hypothetical protein BIFADO_02492 [Bifidobacterium adolescentis L2-32] hypothetical protein BIFADO_02492 [Bifidobacterium adolescentis L2-32] # 49 86 1 38 38 74 100.0 3e-12 MNSESVTVVNLQKLKYTPMMNGITNPMINAANVGSANRAHHFRIALPAMLIIACLLSFLS IPTPQQRGMENQLPQIGESLHCFSPF >gi|148337400|gb|DS264459.1| GENE 520 599180 - 600190 930 336 aa, chain + ## HITS:1 COG:ECs4861 KEGG:ns NR:ns ## COG: ECs4861 COG1609 # Protein_GI_number: 15834115 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli O157:H7 # 3 334 10 340 341 119 29.0 7e-27 MKSSIQDVAQLAHVSISTVSRSFTRPDLVSKATRDKVMKAADELNFSISRSAAALKTGRA LRIAVLISGRLNLWFSSSIMEGLNESFHDEGYDISIYRMSSAEERRAFFDMLPVRRNVDA VIVISFDIDSNEIRQLRSVDVPIIGINSSLPEERGFNAAVRIDDKQGSELAARHLITLGH RDIAYIRTDREVTLHFSVQGRFDSFMTCCKSNGVEPRVFVTDEGKNNISKVVTQLLSSDH MPTAIACQEDGIAIPLLFQLERNGFTIPNDISIIGYDDSTYARDLGLTTIRQTPVEMAHE AARMTLALIDKQPLDEPFKTFPAQLIVRSTTARLRH >gi|148337400|gb|DS264459.1| GENE 521 600382 - 601779 1966 465 aa, chain - ## HITS:1 COG:Cgl2408 KEGG:ns NR:ns ## COG: Cgl2408 COG1653 # Protein_GI_number: 19553658 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Corynebacterium glutamicum # 32 463 7 440 443 362 47.0 1e-100 MTRYRKLFPNEKLGTGMEEKGSMMNRTIKAAVGMVAIAAMSVGTLAACGGSSSSSDNGKG KVYFLNFKPESSDEWKKLAKDYTKETGVEVKVQTAASGTYEQTLKSEIAKSEAPTLFQVN GPVGYQNWSSYTEDMSDTEPYKQLINKDVALKDGDKVVGVPYAMETYGLIYNKDLLAKYI ATDGAKIKSVDDIDNFDTLKAVADDIQAKKDQLGVKGAFTSAGFDSSSDWRFKTHLANLP LYYEFKDDNVTKQPETIKGTYLPEYKNIFDLYLKDSTTEPTQLSSKTGDDSTSEFSLGEA VFYQNGTWAWSDLQKAGMKADSVGMIPIYIGAKGEEKQGLATGSENYWCINSKASDADKK ATKDFLKWVVTSKTGIKSLSSDMGFTTPFKSFSDVKSDNPLVQAAVDDQNSGKTAVSWNF TMMPSEEWKNKLGSALLEYAQGTGDWDAVKTAFVDGWKTEYDAVH >gi|148337400|gb|DS264459.1| GENE 522 602040 - 602744 592 234 aa, chain - ## HITS:1 COG:mll2186 KEGG:ns NR:ns ## COG: mll2186 COG0406 # Protein_GI_number: 13472025 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mesorhizobium loti # 12 233 2 191 193 115 37.0 1e-25 MTETQLGGNAASAITPGRLVLLRHGQTVWSESGQHTGRTNIPLTDIGCDQARAAGERLRE AFPQGFAQGCMFASPLRRAQQTAQLAGYGDFKVLPEIAEWDYGRAEGRTRQDVSAAGGFA WDVWRDGPRSLPESLEGDWVETLPNGEQVPVHNGPGETVEEAAARTREAIATVKPLLDAG NDVLLVAHAHVLRILTSQWLGVDPHFARLLRLDTAHYCVLSQYKGDNVIEHWNC >gi|148337400|gb|DS264459.1| GENE 523 602851 - 603219 442 122 aa, chain + ## HITS:1 COG:no KEGG:BDP_2209 NR:ns ## KEGG: BDP_2209 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 11 118 1 108 109 134 68.0 9e-31 MPNMESSADRVVAALHTVDEKVNAMRDQRLNDPDSFGDKIFKSVVPTLAGLVLGKAFEMV WKKSVGRKAVRADGTKNEAAEAALGIVFAVVSAGFGALVSQLSGRGSKAIVDRRHARQAH RK >gi|148337400|gb|DS264459.1| GENE 524 603328 - 604107 1061 259 aa, chain + ## HITS:1 COG:SA0367 KEGG:ns NR:ns ## COG: SA0367 COG0778 # Protein_GI_number: 15926083 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Staphylococcus aureus N315 # 1 232 1 227 251 133 33.0 3e-31 MSNILHNATVDTLLERRSIRKFKPKPLPDDVVETLETVAQHAASSQFLNDWSAIRVTEPA TKKRLAEIGGQPYIATAPLLYVFVLDEHRNAAIAARKGVEVASDAFTLNGSYRFTQAQND AVLALHAMETAAYSLGLGCVILGSLLNDVPALIDLLNLPEYTYPVLGIAIGKPDQEPAVK PRMPRSMQFFENEYPSSDEKLLSGLDSFDVEVHKYYDLRDTERPVDAFSDQIAANAIDEG VNAKAVAVQAKRQGFRLER >gi|148337400|gb|DS264459.1| GENE 525 604249 - 604500 237 83 aa, chain - ## HITS:1 COG:no KEGG:BDP_2217 NR:ns ## KEGG: BDP_2217 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 83 1 83 83 141 91.0 8e-33 MHYFVPKRCTESNKIMYHDKATAQQAADQSWRERGTELWVYRCDFCGTWHLTHRDPQSSY MHVPLNQQLKPHSRKKGYKPRRR