Prediction of potential genes in microbial genomes Time: Tue Jun 28 05:19:45 2011 Seq name: gi|197324945|gb|DS990229.1| Bifidobacterium bifidum NCIMB 41171 supercont2.1 genomic scaffold, whole genome shotgun sequence Length of sequence - 1497472 bp Number of predicted genes - 1427, with homology - 1284 Number of transcription units - 860, operones - 314 average op.length - 2.8 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 3 - 509 212 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase + Term 653 - 697 2.5 - Term 326 - 362 4.0 2 2 Tu 1 . - CDS 596 - 1813 1348 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 1985 - 2044 3.0 3 3 Tu 1 . - CDS 2125 - 2517 204 ## - Prom 2557 - 2616 1.9 4 4 Tu 1 . - CDS 2626 - 2805 293 ## BLD_0661 hypothetical protein - Prom 3012 - 3071 1.7 5 5 Tu 1 . + CDS 2994 - 3179 102 ## BLIF_0731 hypothetical protein + Term 3278 - 3323 0.2 6 6 Tu 1 . + CDS 3383 - 5461 2001 ## COG0477 Permeases of the major facilitator superfamily + Term 5499 - 5541 9.3 - Term 5487 - 5529 7.7 7 7 Op 1 . - CDS 5629 - 5919 226 ## 8 7 Op 2 . - CDS 5885 - 6139 250 ## COG2801 Transposase and inactivated derivatives - Prom 6186 - 6245 2.7 9 8 Tu 1 . + CDS 6209 - 6523 373 ## COG1484 DNA replication protein 10 9 Tu 1 . - CDS 6945 - 7166 129 ## BBPR_0090 IS204/IS1001/IS1096/IS1165 family transposase 11 10 Op 1 . - CDS 7495 - 7902 370 ## BBPR_0091 hypothetical protein 12 10 Op 2 . - CDS 7999 - 8217 68 ## + Prom 8067 - 8126 5.2 13 11 Tu 1 . + CDS 8239 - 10692 4129 ## COG0058 Glucan phosphorylase + Term 10726 - 10753 0.1 - Term 11316 - 11370 17.0 14 12 Tu 1 . - CDS 11411 - 11632 369 ## BBIF_0127 hypothetical protein 15 13 Tu 1 . + CDS 11819 - 12604 698 ## COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 16 14 Tu 1 . + CDS 12715 - 13338 259 ## COG2801 Transposase and inactivated derivatives + Prom 13376 - 13435 3.3 17 15 Tu 1 . + CDS 13586 - 14887 950 ## BBPR_0096 methyltransferase - Term 14901 - 14960 22.3 18 16 Tu 1 . - CDS 15012 - 15467 649 ## BBIF_0131 septation inhibitor protein + Prom 15450 - 15509 2.1 19 17 Op 1 . + CDS 15530 - 16318 798 ## COG3879 Uncharacterized protein conserved in bacteria 20 17 Op 2 . + CDS 16315 - 17544 1307 ## COG3764 Sortase (surface protein transpeptidase) 21 17 Op 3 . + CDS 17640 - 18284 682 ## COG0512 Anthranilate/para-aminobenzoate synthases component II + Term 18329 - 18381 19.5 - Term 18314 - 18369 19.6 22 18 Op 1 7/0.000 - CDS 18512 - 20557 2720 ## COG0515 Serine/threonine protein kinase 23 18 Op 2 4/0.008 - CDS 20572 - 21555 1176 ## COG0515 Serine/threonine protein kinase 24 18 Op 3 19/0.000 - CDS 21552 - 23018 2090 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 25 18 Op 4 4/0.008 - CDS 23015 - 24493 1839 ## COG0772 Bacterial cell division membrane protein 26 18 Op 5 7/0.000 - CDS 24490 - 26148 1891 ## COG0631 Serine/threonine protein phosphatase 27 18 Op 6 5/0.000 - CDS 26155 - 26697 448 ## COG1716 FOG: FHA domain 28 18 Op 7 . - CDS 26725 - 27426 1076 ## COG1716 FOG: FHA domain 29 18 Op 8 . - CDS 27404 - 27667 99 ## + Prom 27465 - 27524 1.8 30 19 Tu 1 . + CDS 27675 - 30197 2996 ## COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 31 20 Op 1 1/0.062 + CDS 30461 - 33247 3567 ## COG1511 Predicted membrane protein 32 20 Op 2 . + CDS 33244 - 35571 3135 ## COG1511 Predicted membrane protein 33 21 Op 1 . + CDS 35725 - 36144 396 ## COG2267 Lysophospholipase 34 21 Op 2 2/0.023 + CDS 36168 - 36800 667 ## COG2267 Lysophospholipase 35 21 Op 3 . + CDS 36836 - 37810 1177 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 36 22 Op 1 . + CDS 38074 - 38829 573 ## BBPR_0115 hypothetical protein 37 22 Op 2 . + CDS 38881 - 39408 489 ## BBPR_0116 hypothetical protein 38 23 Tu 1 . + CDS 39510 - 40514 1099 ## COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase 39 24 Tu 1 . - CDS 40519 - 41019 353 ## BBPR_0118 hypothetical protein 40 25 Tu 1 . + CDS 40862 - 41221 77 ## + Term 41230 - 41271 -0.9 41 26 Op 1 3/0.016 - CDS 41369 - 44554 3143 ## COG1061 DNA or RNA helicases of superfamily II 42 26 Op 2 . - CDS 44551 - 45000 281 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Term 45125 - 45162 -0.7 43 27 Tu 1 . - CDS 45217 - 45615 225 ## BBPR_0121 hypothetical protein 44 28 Op 1 . + CDS 45688 - 46008 135 ## gi|313139367|ref|ZP_07801560.1| predicted protein 45 28 Op 2 . + CDS 46051 - 46383 525 ## COG0393 Uncharacterized conserved protein 46 29 Op 1 . + CDS 46505 - 47323 792 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 47 29 Op 2 . + CDS 47341 - 47817 258 ## BBIF_0156 acetyltransferase (GNAT) family - TRNA 48225 - 48310 51.0 # Leu CAG 0 0 - Term 48252 - 48286 -0.6 48 30 Tu 1 . - CDS 48456 - 49757 1322 ## COG0343 Queuine/archaeosine tRNA-ribosyltransferase 49 31 Op 1 . + CDS 49968 - 50099 65 ## 50 31 Op 2 . + CDS 50126 - 52048 2810 ## COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain + Term 52118 - 52163 14.9 51 32 Tu 1 . + CDS 52427 - 54628 2065 ## COG2217 Cation transport ATPase 52 33 Op 1 . + CDS 54799 - 56250 2253 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 56282 - 56333 13.1 + Prom 56290 - 56349 2.2 53 33 Op 2 . + CDS 56422 - 57360 1077 ## COG0501 Zn-dependent protease with chaperone function + Term 57448 - 57514 30.0 + TRNA 57430 - 57503 67.1 # Gly CCC 0 0 + Prom 57780 - 57839 5.8 54 34 Tu 1 . + CDS 57872 - 59557 664 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 59639 - 59686 11.2 - Term 59631 - 59667 8.2 55 35 Tu 1 . - CDS 59860 - 60120 113 ## + Prom 59743 - 59802 3.6 56 36 Tu 1 . + CDS 60014 - 60334 226 ## BBPR_0131 mobilization protein 57 37 Op 1 . - CDS 60445 - 61116 685 ## BBPR_0132 hypothetical protein 58 37 Op 2 . - CDS 61113 - 61496 205 ## BBPR_0133 hypothetical protein 59 37 Op 3 . - CDS 61511 - 61858 452 ## BBPR_0134 hypothetical protein 60 37 Op 4 . - CDS 61861 - 62229 443 ## BBPR_0135 hypothetical protein 61 38 Tu 1 . - CDS 62428 - 62730 277 ## BBPR_0136 hypothetical protein - Prom 62758 - 62817 2.2 + Prom 62379 - 62438 8.1 62 39 Tu 1 . + CDS 62645 - 62908 143 ## + Term 63143 - 63185 2.7 63 40 Tu 1 . - CDS 63041 - 63382 272 ## BBPR_0137 XRE family transcriptional regulator - Prom 63433 - 63492 3.4 - Term 63560 - 63604 9.7 64 41 Tu 1 . - CDS 63765 - 65057 1431 ## COG0726 Predicted xylanase/chitin deacetylase 65 42 Tu 1 . + CDS 65196 - 66263 1060 ## COG0191 Fructose/tagatose bisphosphate aldolase + Term 66398 - 66442 -0.2 + Prom 66269 - 66328 1.9 66 43 Op 1 . + CDS 66553 - 67839 1756 ## COG0104 Adenylosuccinate synthase 67 43 Op 2 . + CDS 67914 - 68858 758 ## COG0239 Integral membrane protein possibly involved in chromosome condensation 68 43 Op 3 . + CDS 68860 - 69228 473 ## BBIF_0180 camphor resistance CrcB protein + Prom 69290 - 69349 2.3 69 44 Op 1 3/0.016 + CDS 69395 - 70432 972 ## COG1609 Transcriptional regulators 70 44 Op 2 . + CDS 70515 - 70946 345 ## COG0366 Glycosidases 71 44 Op 3 . + CDS 70997 - 72682 1764 ## COG0477 Permeases of the major facilitator superfamily 72 45 Tu 1 . + CDS 72797 - 73003 67 ## + Term 73146 - 73180 3.0 + Prom 73008 - 73067 1.5 73 46 Op 1 . + CDS 73272 - 74642 2121 ## COG0477 Permeases of the major facilitator superfamily + Term 74646 - 74683 4.1 74 46 Op 2 . + CDS 74888 - 75940 1594 ## COG0059 Ketol-acid reductoisomerase + Term 76014 - 76059 14.8 - Term 76002 - 76047 11.0 75 47 Tu 1 . - CDS 76155 - 76457 151 ## 76 48 Tu 1 . + CDS 76359 - 77411 1590 ## COG0059 Ketol-acid reductoisomerase + Term 77474 - 77526 14.1 - Term 77589 - 77635 16.2 77 49 Op 1 . - CDS 77848 - 78837 481 ## BBIF_0187 protein of unknown function (DUF559) 78 49 Op 2 . - CDS 78883 - 79179 76 ## 79 49 Op 3 . - CDS 79210 - 83085 4881 ## COG3250 Beta-galactosidase/beta-glucuronidase 80 50 Tu 1 . - CDS 83382 - 84878 1799 ## COG1113 Gamma-aminobutyrate permease and related permeases 81 51 Tu 1 . - CDS 85056 - 85268 81 ## - Prom 85471 - 85530 3.0 + Prom 85279 - 85338 3.0 82 52 Tu 1 . + CDS 85420 - 85647 205 ## + Term 85741 - 85794 -0.6 83 53 Tu 1 . - CDS 85619 - 86188 844 ## COG1309 Transcriptional regulator - Prom 86283 - 86342 4.8 + Prom 86235 - 86294 4.8 84 54 Op 1 36/0.000 + CDS 86323 - 87027 201 ## PROTEIN SUPPORTED gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 85 54 Op 2 . + CDS 87036 - 90455 3471 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 86 55 Tu 1 . - CDS 90472 - 90951 752 ## COG1576 Uncharacterized conserved protein - Term 90978 - 91020 3.1 87 56 Tu 1 . - CDS 91183 - 91824 931 ## COG0035 Uracil phosphoribosyltransferase 88 57 Tu 1 . + CDS 91990 - 92244 327 ## BBIF_0195 ABC transporter related protein + Term 92358 - 92395 2.0 89 58 Tu 1 . - CDS 92320 - 92877 744 ## COG1225 Peroxiredoxin + Prom 92828 - 92887 2.1 90 59 Tu 1 . + CDS 92965 - 93882 1013 ## COG1295 Predicted membrane protein 91 60 Tu 1 . + CDS 94004 - 94252 369 ## BBPR_0160 glutaredoxin - Term 94210 - 94238 1.6 92 61 Tu 1 . - CDS 94385 - 94951 387 ## COG3464 Transposase and inactivated derivatives 93 62 Tu 1 . + CDS 95020 - 95265 119 ## gi|224282270|ref|ZP_03645592.1| hypothetical protein BbifN4_00405 + Term 95319 - 95381 16.2 - Term 95307 - 95369 22.0 94 63 Tu 1 . - CDS 95568 - 95735 74 ## - Prom 95926 - 95985 5.4 95 64 Tu 1 . + CDS 95686 - 98154 2441 ## COG1409 Predicted phosphohydrolases + Term 98299 - 98339 0.1 96 65 Op 1 . + CDS 98626 - 100806 2056 ## COG1874 Beta-galactosidase 97 65 Op 2 . + CDS 100841 - 100951 115 ## + Term 101090 - 101125 7.2 - Term 100814 - 100872 6.6 98 66 Tu 1 . - CDS 101117 - 102112 610 ## COG3440 Predicted restriction endonuclease 99 67 Tu 1 . + CDS 101612 - 102892 887 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 103083 - 103121 -0.8 100 68 Op 1 . + CDS 103935 - 105503 1688 ## COG0477 Permeases of the major facilitator superfamily 101 68 Op 2 . + CDS 105519 - 105653 250 ## BBPR_0169 hypothetical protein 102 69 Op 1 23/0.000 - CDS 108305 - 108982 635 ## COG2801 Transposase and inactivated derivatives 103 69 Op 2 . - CDS 109066 - 109353 280 ## COG2963 Transposase and inactivated derivatives - Prom 109397 - 109456 1.6 104 70 Tu 1 . + CDS 109244 - 109465 152 ## 105 71 Tu 1 . + CDS 109795 - 110412 565 ## COG1309 Transcriptional regulator 106 72 Op 1 . - CDS 110361 - 110798 316 ## COG2977 Phosphopantetheinyl transferase component of siderophore synthetase 107 72 Op 2 . - CDS 110764 - 111006 196 ## BBPR_0173 phosphopantetheinyl transferase - Prom 111206 - 111265 4.6 108 73 Tu 1 . + CDS 111008 - 111076 65 ## - TRNA 111485 - 111572 60.0 # Ser GGA 0 0 - Term 111444 - 111481 8.0 109 74 Tu 1 . - CDS 111725 - 111868 223 ## BBIF_0209 hypothetical protein 110 75 Op 1 . + CDS 111818 - 112534 899 ## BBIF_0210 hypothetical protein 111 75 Op 2 . + CDS 112531 - 112686 101 ## + Term 112710 - 112750 9.4 112 76 Tu 1 . + CDS 112964 - 113914 750 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 113 77 Op 1 . - CDS 113960 - 114310 75 ## gi|313139429|ref|ZP_07801622.1| predicted protein 114 77 Op 2 . - CDS 114301 - 114588 209 ## BBPR_0189 hypothetical protein - Prom 114684 - 114743 2.6 + Prom 114642 - 114701 5.7 115 78 Tu 1 . + CDS 114793 - 115323 590 ## COG1846 Transcriptional regulators + Term 115338 - 115383 -0.9 + Prom 115384 - 115443 2.8 116 79 Op 1 35/0.000 + CDS 115542 - 117425 2693 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 117 79 Op 2 . + CDS 117455 - 119416 2471 ## COG1132 ABC-type multidrug transport system, ATPase and permease components + Term 119458 - 119516 17.4 118 80 Tu 1 . + CDS 119527 - 119694 79 ## + Term 119886 - 119930 2.3 + Prom 120147 - 120206 3.7 119 81 Tu 1 . + CDS 120250 - 126129 8577 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 126134 - 126184 8.5 120 82 Tu 1 . + CDS 126287 - 126856 771 ## COG1881 Phospholipid-binding protein 121 83 Op 1 . + CDS 126981 - 128594 2244 ## COG4690 Dipeptidase 122 83 Op 2 . + CDS 128687 - 130204 2097 ## COG2759 Formyltetrahydrofolate synthetase 123 83 Op 3 . + CDS 130281 - 130553 145 ## 124 84 Tu 1 . - CDS 130598 - 130945 553 ## BBIF_0219 hypothetical protein containing MIF domain - Prom 131061 - 131120 3.2 + Prom 130895 - 130954 1.6 125 85 Tu 1 . + CDS 131106 - 131639 579 ## BBIF_0220 GtrA family protein + Term 131662 - 131717 0.5 126 86 Tu 1 . - CDS 131731 - 133161 1846 ## COG0477 Permeases of the major facilitator superfamily 127 87 Tu 1 . + CDS 133001 - 133399 120 ## 128 88 Tu 1 . + CDS 133562 - 134221 846 ## COG0406 Fructose-2,6-bisphosphatase 129 89 Tu 1 . + CDS 134476 - 135399 1143 ## BBIF_0223 hypothetical protein + Term 135636 - 135687 5.5 130 90 Op 1 21/0.000 - CDS 135677 - 136462 1061 ## COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component - Term 136581 - 136631 13.0 131 90 Op 2 . - CDS 136725 - 137792 1799 ## COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 132 91 Tu 1 . + CDS 138220 - 138882 695 ## COG0637 Predicted phosphatase/phosphohexomutase 133 92 Tu 1 . - CDS 139474 - 139947 -112 ## 134 93 Tu 1 . + CDS 139984 - 140079 246 ## 135 94 Tu 1 . + CDS 140337 - 141866 2480 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases 136 95 Op 1 . - CDS 142108 - 142662 341 ## BBPR_0206 ATPase (AAA+ superfamily)-like protein 137 95 Op 2 . - CDS 142604 - 142996 332 ## COG1373 Predicted ATPase (AAA+ superfamily) - Prom 143027 - 143086 1.6 + TRNA 143488 - 143563 48.5 # Glu CTC 0 0 + TRNA 143604 - 143678 55.6 # Gln CTG 0 0 + Prom 143489 - 143548 78.1 138 96 Op 1 . + CDS 143679 - 143828 88 ## 139 96 Op 2 . + CDS 143958 - 145247 1134 ## COG1409 Predicted phosphohydrolases + Term 145267 - 145300 0.5 - Term 145191 - 145220 1.1 140 97 Tu 1 . - CDS 145395 - 146249 848 ## COG1414 Transcriptional regulator - Prom 146455 - 146514 2.5 + Prom 146277 - 146336 3.3 141 98 Op 1 30/0.000 + CDS 146524 - 147927 1835 ## COG0065 3-isopropylmalate dehydratase large subunit 142 98 Op 2 . + CDS 148072 - 148764 1088 ## COG0066 3-isopropylmalate dehydratase small subunit + Prom 148784 - 148843 1.9 143 99 Op 1 . + CDS 148923 - 152942 3759 ## COG0553 Superfamily II DNA/RNA helicases, SNF2 family 144 99 Op 2 . + CDS 153017 - 153397 520 ## BBPR_0213 hypothetical protein + Term 153424 - 153454 3.0 145 100 Tu 1 . + CDS 154289 - 155395 1103 ## BBPR_0214 hypothetical protein + Term 155403 - 155457 3.0 + Prom 155406 - 155465 1.9 146 101 Op 1 . + CDS 155522 - 156673 1117 ## BBIF_0238 dihydroorotate dehydrogenase + Prom 156732 - 156791 2.5 147 101 Op 2 . + CDS 156952 - 158277 2040 ## COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase + Term 158293 - 158342 10.1 148 102 Op 1 11/0.000 - CDS 158374 - 159717 1442 ## COG0477 Permeases of the major facilitator superfamily - Prom 159813 - 159872 2.5 149 102 Op 2 . - CDS 159940 - 160650 878 ## COG1309 Transcriptional regulator - Prom 160671 - 160730 4.2 + Prom 160653 - 160712 6.3 150 103 Tu 1 . + CDS 160849 - 161772 939 ## BBIF_0242 hypothetical protein + Term 161825 - 161860 5.6 + Prom 161908 - 161967 2.1 151 104 Op 1 55/0.000 + CDS 162097 - 162528 713 ## PROTEIN SUPPORTED gi|224282316|ref|ZP_03645638.1| 50S ribosomal protein L11 152 104 Op 2 . + CDS 162543 - 163235 1161 ## PROTEIN SUPPORTED gi|224282317|ref|ZP_03645639.1| 50S ribosomal protein L1 + Term 163259 - 163309 16.3 153 105 Op 1 . - CDS 163163 - 163426 336 ## BBIF_0245 hypothetical protein 154 105 Op 2 . - CDS 163490 - 164479 1455 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 - Prom 164544 - 164603 3.0 155 106 Op 1 . + CDS 164570 - 165643 907 ## BBIF_0247 hypothetical protein 156 106 Op 2 . + CDS 165636 - 166649 1220 ## BBPR_0225 hypothetical protein + Term 166778 - 166816 3.2 157 106 Op 3 . + CDS 166886 - 167872 1282 ## COG3118 Thioredoxin domain-containing protein + Term 167901 - 167959 21.0 - Term 167896 - 167939 1.2 158 107 Tu 1 . - CDS 167971 - 168597 543 ## COG2954 Uncharacterized protein conserved in bacteria - Prom 168737 - 168796 78.0 + TRNA 168720 - 168795 86.5 # Arg CCG 0 0 + Prom 168721 - 168780 78.5 159 108 Tu 1 . + CDS 168818 - 168991 56 ## gi|224282323|ref|ZP_03645645.1| hypothetical protein BbifN4_00684 + Term 169062 - 169112 6.8 - Term 168907 - 168944 -0.8 160 109 Tu 1 . - CDS 169097 - 170113 1339 ## COG1609 Transcriptional regulators 161 110 Tu 1 . - CDS 170175 - 170318 68 ## + Prom 170204 - 170263 3.0 162 111 Tu 1 . + CDS 170305 - 170445 93 ## BBIF_0252 hypothetical protein 163 112 Op 1 . + CDS 170663 - 171124 389 ## COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 164 112 Op 2 . + CDS 171131 - 171283 131 ## gi|224282327|ref|ZP_03645649.1| hypothetical protein BbifN4_00704 165 112 Op 3 . + CDS 171229 - 171993 776 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 166 112 Op 4 . + CDS 171990 - 172484 610 ## BBPR_0232 hypothetical protein + Term 172500 - 172545 13.2 + Prom 172495 - 172554 2.8 167 113 Tu 1 . + CDS 172632 - 173069 731 ## BBPR_0233 lacto-N-biose phorylase 168 114 Op 1 . + CDS 173448 - 174884 1953 ## BBIF_0256 lacto-N-biose phosphorylase 2 + Term 174928 - 174981 15.2 + Prom 174981 - 175040 2.9 169 114 Op 2 . + CDS 175109 - 175498 561 ## COG0251 Putative translation initiation inhibitor, yjgF family + Term 175542 - 175606 22.4 170 115 Tu 1 . + CDS 175672 - 175950 69 ## gi|313139478|ref|ZP_07801671.1| predicted protein 171 116 Op 1 . + CDS 176092 - 177153 656 ## COG0584 Glycerophosphoryl diester phosphodiesterase 172 116 Op 2 4/0.008 + CDS 177223 - 179019 2467 ## COG0018 Arginyl-tRNA synthetase + Term 179026 - 179072 16.2 + Prom 179086 - 179145 1.8 173 117 Tu 1 . + CDS 179185 - 180813 1887 ## COG0019 Diaminopimelate decarboxylase + Term 180866 - 180914 12.3 - Term 180848 - 180909 17.3 174 118 Op 1 3/0.016 - CDS 180930 - 181436 706 ## COG2190 Phosphotransferase system IIA components 175 118 Op 2 . - CDS 181433 - 183217 2087 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 176 119 Tu 1 . + CDS 183459 - 184772 1882 ## COG0460 Homoserine dehydrogenase 177 120 Tu 1 . - CDS 184773 - 185018 188 ## 178 121 Tu 1 . + CDS 184920 - 185918 1458 ## COG0083 Homoserine kinase 179 122 Tu 1 . + CDS 186031 - 187467 1413 ## COG0424 Nucleotide-binding protein implicated in inhibition of septum formation + Term 187674 - 187723 6.1 - Term 187202 - 187236 -0.3 180 123 Op 1 . - CDS 187471 - 187851 123 ## BBPR_0244 hypothetical protein 181 123 Op 2 . - CDS 187851 - 188213 461 ## BBIF_0267 hypothetical protein 182 123 Op 3 . - CDS 188265 - 188462 181 ## + Prom 188226 - 188285 6.8 183 124 Op 1 . + CDS 188430 - 189467 1007 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 184 124 Op 2 . + CDS 189464 - 190918 1509 ## BBIF_0269 permease 185 125 Tu 1 . - CDS 190993 - 191937 1289 ## COG0679 Predicted permeases + Prom 191888 - 191947 2.1 186 126 Tu 1 . + CDS 191986 - 193410 1410 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Prom 193603 - 193662 3.7 187 127 Tu 1 4/0.008 + CDS 193890 - 196757 3226 ## COG1530 Ribonucleases G and E + Term 196772 - 196835 19.2 + Prom 196795 - 196854 2.0 188 128 Op 1 32/0.000 + CDS 196924 - 197232 502 ## PROTEIN SUPPORTED gi|224282349|ref|ZP_03645671.1| 50S ribosomal protein L21 189 128 Op 2 . + CDS 197257 - 197508 430 ## PROTEIN SUPPORTED gi|224282350|ref|ZP_03645672.1| 50S ribosomal protein L27 + Term 197531 - 197565 5.0 - Term 197320 - 197360 -0.1 190 129 Tu 1 . - CDS 197495 - 197713 73 ## 191 130 Tu 1 . - CDS 197956 - 199017 570 ## BBPR_0254 hypothetical protein 192 131 Tu 1 . + CDS 198983 - 199219 115 ## + Term 199262 - 199313 -0.7 193 132 Op 1 7/0.000 + CDS 199439 - 201124 2258 ## COG0536 Predicted GTPase 194 132 Op 2 . + CDS 201317 - 202447 1206 ## COG0263 Glutamate 5-kinase + Term 202456 - 202509 -1.0 195 132 Op 3 . + CDS 202520 - 203740 1671 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 203839 - 203873 3.6 + TRNA 203921 - 203996 87.9 # Trp CCA 0 0 + Prom 203922 - 203981 78.7 196 133 Op 1 . + CDS 204002 - 204256 439 ## BBIF_0279 preprotein translocase, SecE subunit 197 133 Op 2 . + CDS 204286 - 205128 1131 ## COG0250 Transcription antiterminator + Term 205153 - 205189 8.1 198 134 Tu 1 . + CDS 205234 - 206118 820 ## BBIF_0281 phospholipid/glycerol acyltransferase + Term 206145 - 206187 9.1 199 135 Tu 1 . + CDS 206239 - 207234 1272 ## COG0240 Glycerol-3-phosphate dehydrogenase + Term 207407 - 207433 -1.0 200 136 Op 1 . + CDS 207470 - 208615 1473 ## COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes 201 136 Op 2 . + CDS 208645 - 209676 1183 ## COG0584 Glycerophosphoryl diester phosphodiesterase 202 136 Op 3 . + CDS 209689 - 209832 109 ## + Prom 210037 - 210096 5.0 203 137 Tu 1 . + CDS 210177 - 215972 9123 ## BBIF_0285 hypothetical protein containing multiple sugar recognition domains + Term 215985 - 216034 16.1 - Term 215976 - 216018 8.2 204 138 Tu 1 . - CDS 216107 - 217120 1456 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 217189 - 217248 2.9 - Term 217192 - 217237 11.2 205 139 Op 1 . - CDS 217311 - 220520 3305 ## BBIF_0287 hypothetical protein, UPF0547 family 206 139 Op 2 . - CDS 220701 - 221429 697 ## BBIF_0288 hypothetical protein + Prom 221391 - 221450 2.2 207 140 Op 1 . + CDS 221486 - 221731 193 ## COG3070 Regulator of competence-specific genes 208 140 Op 2 . + CDS 221691 - 221801 90 ## + Term 221860 - 221910 -0.6 + Prom 221841 - 221900 6.2 209 141 Op 1 . + CDS 221978 - 222133 71 ## 210 141 Op 2 . + CDS 222099 - 223553 1426 ## BBIF_0289 hypothetical protein + Prom 223601 - 223660 1.7 211 142 Op 1 24/0.000 + CDS 223704 - 224000 498 ## PROTEIN SUPPORTED gi|224282367|ref|ZP_03645689.1| 30S ribosomal protein S6 212 142 Op 2 21/0.000 + CDS 224058 - 224741 876 ## COG0629 Single-stranded DNA-binding protein 213 142 Op 3 27/0.000 + CDS 224827 - 225075 411 ## PROTEIN SUPPORTED gi|224282369|ref|ZP_03645691.1| 30S ribosomal protein S18 214 142 Op 4 . + CDS 225093 - 225539 715 ## PROTEIN SUPPORTED gi|224282370|ref|ZP_03645692.1| Ribosomal protein L9 + Term 225582 - 225624 10.0 215 143 Op 1 . + CDS 226119 - 226868 852 ## BBPR_0275 hypothetical protein 216 143 Op 2 . + CDS 226865 - 227389 580 ## BBIF_0295 hypothetical protein containing bacterial Ig-like domain (group 3) + Term 227448 - 227496 12.4 217 144 Tu 1 . - CDS 227586 - 227831 215 ## - Prom 227962 - 228021 3.3 - TRNA 227865 - 227941 87.8 # Lys CTT 0 0 + Prom 228097 - 228156 1.8 218 145 Tu 1 . + CDS 228272 - 229003 1043 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) + Term 229223 - 229260 1.5 219 146 Tu 1 . + CDS 229312 - 230022 586 ## BBPR_0278 hypothetical protein 220 147 Tu 1 . + CDS 230079 - 231200 718 ## COG0008 Glutamyl- and glutaminyl-tRNA synthetases + Term 231280 - 231315 -0.9 + Prom 231289 - 231348 2.6 221 148 Tu 1 . + CDS 231378 - 232202 899 ## COG0325 Predicted enzyme with a TIM-barrel fold + Term 232237 - 232276 2.2 222 149 Op 1 . + CDS 232343 - 232723 439 ## COG1254 Acylphosphatases 223 149 Op 2 . + CDS 232686 - 232883 105 ## + Term 232903 - 232946 7.1 224 150 Tu 1 . + CDS 233398 - 236907 3652 ## BBPR_0282 cell surface protein 225 151 Tu 1 . + CDS 237069 - 238670 2103 ## BBIF_0302 hypothetical protein with Cna B-type domain 226 152 Tu 1 . + CDS 238851 - 240029 1183 ## COG3764 Sortase (surface protein transpeptidase) + Term 240083 - 240121 -0.8 + Prom 240154 - 240213 2.2 227 153 Tu 1 . + CDS 240305 - 241681 1442 ## BBPR_0285 hypothetical protein + Term 241710 - 241751 6.2 228 154 Tu 1 . + CDS 241796 - 242611 1084 ## COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) + Term 242713 - 242747 -0.2 229 155 Op 1 . + CDS 243030 - 243440 191 ## 230 155 Op 2 . + CDS 243442 - 246105 1852 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 231 156 Op 1 . - CDS 246400 - 247173 890 ## COG0668 Small-conductance mechanosensitive channel 232 156 Op 2 . - CDS 247236 - 247886 768 ## BBIF_0309 hypothetical protein, transcriptional regulator, TetR family - Prom 247951 - 248010 2.4 233 157 Tu 1 . + CDS 247888 - 248109 137 ## 234 158 Tu 1 . - CDS 248049 - 249323 1227 ## BBPR_0290 hypothetical protein - Prom 249435 - 249494 2.2 235 159 Tu 1 . + CDS 249431 - 250621 1673 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 250644 - 250699 17.8 236 160 Op 1 . + CDS 250844 - 251743 471 ## BBPR_0292 hypothetical protein 237 160 Op 2 . + CDS 251665 - 252078 517 ## BBIF_0312 hypothetical protein 238 160 Op 3 . + CDS 252145 - 253083 545 ## BBPR_0294 hypothetical protein 239 160 Op 4 . + CDS 253087 - 253308 85 ## gi|313140730|ref|ZP_07802923.1| predicted protein + Term 253428 - 253469 -0.2 - Term 253790 - 253830 -0.9 240 161 Tu 1 . - CDS 253919 - 254194 272 ## BBIF_0314 hypothetical protein - Term 254271 - 254325 1.6 241 162 Tu 1 . - CDS 254386 - 256197 2599 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 242 163 Tu 1 . - CDS 256328 - 256510 93 ## 243 164 Tu 1 . + CDS 256659 - 256895 254 ## BBIF_0317 hypothetical protein + Term 256970 - 257000 -0.9 + TRNA 256991 - 257063 68.1 # Gly GCC 0 0 + TRNA 257112 - 257183 74.3 # Val GAC 0 0 + TRNA 257214 - 257286 80.2 # Val CAC 0 0 + TRNA 257311 - 257383 80.6 # Ala GGC 0 0 + Prom 257310 - 257369 76.3 244 165 Op 1 . + CDS 257479 - 258231 586 ## COG4106 Trans-aconitate methyltransferase + Term 258297 - 258329 -0.6 245 165 Op 2 . + CDS 258334 - 258579 63 ## 246 166 Tu 1 . + CDS 258749 - 259996 1314 ## COG1396 Predicted transcriptional regulators + Term 260138 - 260183 3.5 + Prom 260048 - 260107 1.8 247 167 Tu 1 . + CDS 260294 - 260575 122 ## BBIF_0321 hypothetical protein 248 168 Tu 1 . - CDS 260572 - 260676 90 ## - Prom 260779 - 260838 3.5 + Prom 260741 - 260800 2.4 249 169 Tu 1 . + CDS 260842 - 261165 283 ## BBPR_0313 hypothetical protein 250 170 Tu 1 . - CDS 261166 - 261384 142 ## 251 171 Tu 1 . + CDS 261274 - 261543 115 ## BBIF_0323 hypothetical protein + Term 261582 - 261622 -0.7 + Prom 261572 - 261631 2.0 252 172 Tu 1 . + CDS 261722 - 262465 607 ## COG0789 Predicted transcriptional regulators + Term 262586 - 262612 -0.6 253 173 Tu 1 . - CDS 262646 - 263968 1838 ## COG2270 Permeases of the major facilitator superfamily - Prom 263990 - 264049 3.5 - Term 264777 - 264838 20.1 254 174 Op 1 . - CDS 264931 - 265989 1266 ## COG0524 Sugar kinases, ribokinase family 255 174 Op 2 . - CDS 266046 - 266225 150 ## + Prom 266121 - 266180 4.5 256 175 Tu 1 . + CDS 266249 - 266443 338 ## PROTEIN SUPPORTED gi|224282407|ref|ZP_03645729.1| 50S ribosomal protein L28 + Term 266466 - 266510 12.6 257 176 Tu 1 . + CDS 266563 - 269247 2579 ## COG1200 RecG-like helicase + Prom 269333 - 269392 4.5 258 177 Op 1 . + CDS 269428 - 270735 1388 ## BBIF_0330 amino acid transporter 259 177 Op 2 . + CDS 270788 - 270958 124 ## BBIF_0331 hypothetical protein + Term 271081 - 271118 6.1 260 178 Op 1 . + CDS 271196 - 272284 1053 ## BBIF_0332 hypothetical protein 261 178 Op 2 . + CDS 272348 - 274258 2808 ## BBPR_0323 hypothetical protein 262 178 Op 3 . + CDS 274267 - 275826 1627 ## COG1301 Na+/H+-dicarboxylate symporters 263 179 Op 1 . + CDS 276071 - 276733 566 ## COG0742 N6-adenine-specific methylase 264 179 Op 2 . + CDS 276948 - 277550 1035 ## COG3560 Predicted oxidoreductase related to nitroreductase + Term 277609 - 277656 10.4 - Term 277597 - 277644 6.1 265 180 Tu 1 . - CDS 277700 - 278152 655 ## COG0071 Molecular chaperone (small heat shock protein) 266 181 Op 1 30/0.000 - CDS 278399 - 279496 987 ## COG0336 tRNA-(guanine-N1)-methyltransferase 267 181 Op 2 12/0.000 - CDS 279658 - 280260 749 ## COG0806 RimM protein, required for 16S rRNA processing 268 181 Op 3 19/0.000 - CDS 280269 - 280502 276 ## COG1837 Predicted RNA-binding protein (contains KH domain) 269 181 Op 4 . - CDS 280505 - 280954 740 ## PROTEIN SUPPORTED gi|224282419|ref|ZP_03645741.1| 30S ribosomal protein S16 + Prom 280923 - 280982 3.0 270 182 Tu 1 . + CDS 281181 - 281378 172 ## gi|313139564|ref|ZP_07801757.1| predicted protein - Term 281377 - 281410 1.2 271 183 Tu 1 . - CDS 281531 - 283321 1721 ## COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs + Prom 283080 - 283139 6.3 272 184 Tu 1 . + CDS 283263 - 283955 719 ## COG1279 Lysine efflux permease + Term 283974 - 284017 8.4 273 185 Tu 1 . - CDS 284225 - 285397 819 ## BBPR_0334 hypothetical protein - Prom 285437 - 285496 1.9 - Term 285492 - 285557 15.5 274 186 Tu 1 . - CDS 285573 - 287219 2342 ## COG0541 Signal recognition particle GTPase + Prom 287452 - 287511 2.3 275 187 Tu 1 . + CDS 287579 - 288487 1336 ## BBIF_0346 conserved hypothetical membrane spanning protein of the cation efflux family + Term 288523 - 288573 1.7 276 188 Tu 1 . - CDS 288717 - 290339 2335 ## COG0215 Cysteinyl-tRNA synthetase + Prom 290290 - 290349 2.5 277 189 Tu 1 . + CDS 290486 - 291211 902 ## COG0518 GMP synthase - Glutamine amidotransferase domain 278 190 Tu 1 . + CDS 291320 - 293440 2958 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 293441 - 293467 -0.6 279 191 Tu 1 . - CDS 293456 - 293797 326 ## BBIF_0350 hypothetical protein with DUF3039 domain - Prom 293820 - 293879 2.0 280 192 Op 1 . + CDS 293961 - 294461 320 ## PROTEIN SUPPORTED gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 281 192 Op 2 . + CDS 294545 - 295450 1215 ## BBIF_0352 hypothetical protein 282 192 Op 3 . + CDS 295515 - 296129 892 ## COG1399 Predicted metal-binding, possibly nucleic acid-binding protein + Prom 296158 - 296217 2.6 283 192 Op 4 . + CDS 296258 - 296452 350 ## PROTEIN SUPPORTED gi|224282433|ref|ZP_03645755.1| 50S ribosomal protein L32 + Term 296478 - 296526 15.0 + Prom 296467 - 296526 1.8 284 193 Tu 1 . + CDS 296602 - 297369 1136 ## COG0571 dsRNA-specific ribonuclease + Term 297376 - 297417 4.3 285 194 Op 1 32/0.000 + CDS 297555 - 299447 2502 ## COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] 286 194 Op 2 . + CDS 299483 - 300037 933 ## COG0440 Acetolactate synthase, small (regulatory) subunit + Term 300069 - 300104 7.1 287 195 Tu 1 . + CDS 300458 - 301360 726 ## BBPR_0349 nicotinate phosphoribosyltransferase + Term 301378 - 301406 -0.3 288 196 Tu 1 . - CDS 301097 - 302419 1574 ## COG1488 Nicotinic acid phosphoribosyltransferase 289 197 Op 1 8/0.000 + CDS 302622 - 303353 921 ## COG0689 RNase PH 290 197 Op 2 . + CDS 303433 - 304101 384 ## PROTEIN SUPPORTED gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase - Term 304023 - 304051 -1.0 291 198 Tu 1 . - CDS 304223 - 305224 1260 ## COG0679 Predicted permeases - TRNA 305268 - 305348 64.8 # Leu TAG 0 0 - TRNA 305406 - 305481 88.3 # Thr CGT 0 0 + Prom 305562 - 305621 3.1 292 199 Tu 1 . + CDS 305728 - 307425 3091 ## COG0166 Glucose-6-phosphate isomerase + Term 307457 - 307491 2.5 293 200 Tu 1 . - CDS 307445 - 307687 116 ## - Prom 307870 - 307929 2.4 + Prom 307817 - 307876 3.3 294 201 Op 1 . + CDS 307918 - 309060 1374 ## BBIF_0364 hypothetical protein 295 201 Op 2 . + CDS 309066 - 309887 751 ## BBIF_0365 hypothetical protein 296 202 Tu 1 . + CDS 310076 - 311194 1110 ## BBIF_0366 hypothetical protein + Term 311196 - 311234 2.1 297 203 Tu 1 . + CDS 311578 - 312072 539 ## BBIF_0367 hypothetical protein + Term 312127 - 312184 -0.0 298 204 Tu 1 . - CDS 312082 - 312819 923 ## COG1285 Uncharacterized membrane protein - Prom 312867 - 312926 2.1 - Term 312870 - 312895 -0.5 299 205 Tu 1 . - CDS 312949 - 315738 2476 ## COG0474 Cation transport ATPase 300 206 Op 1 6/0.000 - CDS 315826 - 317325 1614 ## COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 301 206 Op 2 . - CDS 317451 - 319232 2141 ## COG4986 ABC-type anion transport system, duplicated permease component 302 207 Tu 1 . - CDS 319532 - 319702 188 ## BBIF_0372 hypothetical protein - Prom 319933 - 319992 1.5 303 208 Tu 1 . - CDS 320040 - 321008 1241 ## COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain - Prom 321114 - 321173 1.5 304 209 Op 1 3/0.016 + CDS 321357 - 322619 2042 ## COG3775 Phosphotransferase system, galactitol-specific IIC component 305 209 Op 2 2/0.023 + CDS 322662 - 324185 2058 ## COG1070 Sugar (pentulose and hexulose) kinases 306 209 Op 3 8/0.000 + CDS 324187 - 325077 1221 ## COG3623 Putative L-xylulose-5-phosphate 3-epimerase + Term 325086 - 325127 12.6 307 210 Tu 1 . + CDS 325169 - 325861 775 ## COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases + Term 325956 - 325991 -0.1 308 211 Tu 1 . - CDS 325834 - 325998 75 ## + Prom 326080 - 326139 2.8 309 212 Op 1 5/0.000 + CDS 326336 - 326713 624 ## PROTEIN SUPPORTED gi|224282456|ref|ZP_03645778.1| ribosomal protein L19 + Term 326747 - 326788 11.8 310 212 Op 2 4/0.008 + CDS 326816 - 327649 693 ## COG0681 Signal peptidase I 311 212 Op 3 . + CDS 327674 - 328369 527 ## COG0164 Ribonuclease HII + Term 328400 - 328436 2.2 + Prom 328554 - 328613 3.5 312 213 Tu 1 . + CDS 328683 - 329762 1034 ## COG1609 Transcriptional regulators - Term 330323 - 330349 -1.0 313 214 Tu 1 . - CDS 330389 - 332332 2466 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 332540 - 332599 3.3 314 215 Tu 1 . + CDS 332772 - 333647 1215 ## COG0214 Pyridoxine biosynthesis enzyme + Term 333756 - 333793 0.1 315 216 Tu 1 . + CDS 333964 - 334584 727 ## COG0311 Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 316 217 Tu 1 . - CDS 334560 - 334649 78 ## - Prom 334885 - 334944 3.6 317 218 Op 1 . + CDS 335143 - 335319 204 ## BBIF_0385 hypothetical protein 318 218 Op 2 . + CDS 335411 - 336856 1178 ## BBIF_0386 endo-1,4-beta-xylanase 319 218 Op 3 . + CDS 336916 - 338028 1338 ## COG1609 Transcriptional regulators + Term 338183 - 338222 0.1 + Prom 338326 - 338385 2.0 320 219 Tu 1 . + CDS 338583 - 338789 191 ## BBIF_0388 hypothetical protein + Prom 339132 - 339191 2.3 321 220 Tu 1 . + CDS 339259 - 340143 1138 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 322 221 Tu 1 . + CDS 340321 - 340998 849 ## BBPR_0383 hypothetical protein 323 222 Tu 1 . - CDS 340992 - 341138 62 ## 324 223 Op 1 . + CDS 341154 - 342458 1530 ## COG1914 Mn2+ and Fe2+ transporters of the NRAMP family 325 223 Op 2 . + CDS 342532 - 343065 132 ## - Term 342725 - 342776 14.4 326 224 Tu 1 . - CDS 342787 - 344454 1865 ## COG0477 Permeases of the major facilitator superfamily 327 225 Tu 1 . - CDS 344919 - 345212 81 ## + Prom 344982 - 345041 3.1 328 226 Tu 1 . + CDS 345090 - 346661 1544 ## BBIF_0413 hypothetical protein + Term 346664 - 346700 2.2 - Term 347113 - 347143 4.1 329 227 Tu 1 . - CDS 347170 - 348165 1441 ## COG3583 Uncharacterized protein conserved in bacteria - Prom 348267 - 348326 3.9 330 228 Tu 1 . - CDS 348400 - 348762 616 ## COG0526 Thiol-disulfide isomerase and thioredoxins - Prom 348942 - 349001 1.7 331 229 Tu 1 . + CDS 348960 - 349586 763 ## BBIF_0416 hypothetical protein 332 230 Tu 1 . + CDS 349732 - 350586 801 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 333 231 Op 1 . + CDS 350700 - 351791 1305 ## COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 334 231 Op 2 . + CDS 351869 - 353719 2746 ## COG1376 Uncharacterized protein conserved in bacteria + Term 353753 - 353807 19.5 335 232 Tu 1 . + CDS 353867 - 354274 545 ## COG0509 Glycine cleavage system H protein (lipoate-binding) + Prom 354311 - 354370 2.2 336 233 Op 1 . + CDS 354390 - 355751 1762 ## COG4850 Uncharacterized conserved protein 337 233 Op 2 . + CDS 355807 - 358269 2210 ## COG1770 Protease II 338 234 Tu 1 . - CDS 358250 - 358528 163 ## 339 235 Tu 1 . + CDS 358513 - 358665 89 ## + Term 358774 - 358821 -1.0 340 236 Tu 1 . + CDS 358845 - 359876 1339 ## COG0473 Isocitrate/isopropylmalate dehydrogenase 341 237 Tu 1 . + CDS 360642 - 361280 710 ## COG0095 Lipoate-protein ligase A 342 238 Tu 1 . + CDS 361444 - 362163 899 ## COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases + Term 362189 - 362234 0.3 + Prom 362218 - 362277 2.4 343 239 Op 1 . + CDS 362329 - 364647 2825 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) 344 239 Op 2 . + CDS 364935 - 366068 1412 ## COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family + Term 366087 - 366133 17.5 - Term 366070 - 366125 22.1 345 240 Tu 1 . - CDS 366138 - 367424 1650 ## COG0167 Dihydroorotate dehydrogenase - Prom 367474 - 367533 2.3 346 241 Op 1 . + CDS 367408 - 368292 841 ## COG1349 Transcriptional regulators of sugar metabolism 347 241 Op 2 8/0.000 + CDS 368297 - 369547 1955 ## COG1085 Galactose-1-phosphate uridylyltransferase 348 241 Op 3 . + CDS 369637 - 370887 1659 ## COG0153 Galactokinase + Term 370950 - 371007 19.6 - Term 371053 - 371086 4.4 349 242 Tu 1 . - CDS 371105 - 372430 2202 ## COG0477 Permeases of the major facilitator superfamily + Prom 372398 - 372457 2.1 350 243 Op 1 . + CDS 372610 - 372768 89 ## gi|313139643|ref|ZP_07801836.1| predicted protein 351 243 Op 2 9/0.000 + CDS 372807 - 373079 507 ## COG3830 ACT domain-containing protein 352 243 Op 3 . + CDS 373099 - 374463 2024 ## COG2848 Uncharacterized conserved protein + Term 374536 - 374581 14.1 353 244 Op 1 . + CDS 374887 - 375576 579 ## Corgl_1260 hypothetical protein 354 244 Op 2 . + CDS 375589 - 376038 132 ## BBIF_0436 hypothetical protein + Term 376137 - 376196 3.2 355 245 Tu 1 . - CDS 376840 - 377487 939 ## COG0219 Predicted rRNA methylase (SpoU class) 356 246 Op 1 . + CDS 377572 - 377898 248 ## BBIF_0438 hypothetical protein with coagulation factor 5/8 type domain 357 246 Op 2 . + CDS 377843 - 378400 711 ## BBIF_0438 hypothetical protein with coagulation factor 5/8 type domain 358 246 Op 3 . + CDS 378445 - 378783 417 ## BBIF_0439 hypothetical protein 359 246 Op 4 . + CDS 378952 - 379968 773 ## COG1194 A/G-specific DNA glycosylase + Term 379985 - 380039 15.8 360 247 Tu 1 . + CDS 380063 - 380719 611 ## BBPR_0417 hypothetical protein + Term 380776 - 380825 1.0 - Term 380545 - 380593 5.2 361 248 Tu 1 . - CDS 380723 - 380950 110 ## 362 249 Op 1 58/0.000 + CDS 380868 - 384551 842 ## PROTEIN SUPPORTED gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 363 249 Op 2 . + CDS 384664 - 388695 5709 ## COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit + Term 388724 - 388774 20.0 - Term 388796 - 388833 -0.2 364 250 Op 1 . - CDS 388951 - 389496 867 ## BBPR_0420 hypothetical protein 365 250 Op 2 . - CDS 389511 - 390119 779 ## BBIF_0445 hypothetical protein 366 250 Op 3 . - CDS 390141 - 391034 974 ## COG0631 Serine/threonine protein phosphatase 367 250 Op 4 5/0.000 - CDS 391031 - 393727 2915 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases 368 250 Op 5 23/0.000 - CDS 393724 - 395043 1403 ## COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 369 250 Op 6 . - CDS 395054 - 396760 1737 ## COG0714 MoxR-like ATPases 370 250 Op 7 . - CDS 396825 - 402803 7453 ## BBPR_0426 fibronectin type III domain-containing protein (EC:2.7.11.18) 371 250 Op 8 . - CDS 402882 - 404300 1420 ## COG0515 Serine/threonine protein kinase - Prom 404425 - 404484 3.0 372 251 Op 1 5/0.000 + CDS 404542 - 408825 2753 ## COG0210 Superfamily I DNA and RNA helicases 373 251 Op 2 . + CDS 408822 - 413027 3326 ## COG0210 Superfamily I DNA and RNA helicases 374 252 Op 1 . + CDS 413164 - 414030 738 ## BBPR_0430 hypothetical protein 375 252 Op 2 . + CDS 414027 - 415445 1702 ## COG0477 Permeases of the major facilitator superfamily + Term 415648 - 415681 -0.4 376 253 Op 1 . - CDS 415348 - 415716 191 ## COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 377 253 Op 2 . - CDS 415677 - 415925 188 ## BBPR_0432 hypothetical protein 378 254 Tu 1 . + CDS 415831 - 416004 94 ## BBIF_0456 hypothetical protein + Term 416083 - 416124 1.1 379 255 Op 1 . - CDS 416098 - 416277 240 ## BBIF_0457 hypothetical protein with RelB antitoxin domain 380 255 Op 2 . - CDS 416330 - 416665 340 ## BBIF_0458 hypothetical protein - Prom 416854 - 416913 2.2 381 256 Op 1 6/0.000 + CDS 416830 - 417657 1039 ## COG0289 Dihydrodipicolinate reductase + Term 417691 - 417728 1.3 382 256 Op 2 9/0.000 + CDS 417821 - 418711 1077 ## COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase 383 256 Op 3 . + CDS 418885 - 420726 2558 ## COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily + Term 420795 - 420844 11.2 384 257 Tu 1 . + CDS 420892 - 423504 4202 ## COG0308 Aminopeptidase N + Term 423530 - 423591 12.1 + Prom 423778 - 423837 2.2 385 258 Op 1 . + CDS 424044 - 425708 1136 ## BBPR_0440 hypothetical protein 386 258 Op 2 . + CDS 425590 - 425862 171 ## + Prom 425883 - 425942 3.7 387 259 Op 1 . + CDS 426085 - 427470 2027 ## COG1109 Phosphomannomutase 388 259 Op 2 . + CDS 427512 - 428165 930 ## COG0242 N-formylmethionyl-tRNA deformylase + Term 428236 - 428294 11.3 - Term 428269 - 428306 -0.5 389 260 Tu 1 . - CDS 428501 - 429922 1537 ## BBIF_0467 hypothetical protein - Prom 429961 - 430020 2.0 390 261 Tu 1 . + CDS 430019 - 430609 579 ## COG3727 DNA G:T-mismatch repair endonuclease + Prom 430705 - 430764 3.7 391 262 Op 1 . + CDS 430797 - 431990 1350 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 392 262 Op 2 . + CDS 432069 - 432731 86 ## COG0248 Exopolyphosphatase 393 262 Op 3 . + CDS 432517 - 432816 379 ## COG0248 Exopolyphosphatase + Term 432908 - 432952 1.3 394 263 Tu 1 . - CDS 432869 - 433618 997 ## BBIF_0471 hypothetical protein 395 264 Tu 1 . + CDS 433834 - 434643 706 ## COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 + Term 434648 - 434673 -0.5 396 265 Op 1 . + CDS 434822 - 436189 1578 ## COG2210 Uncharacterized conserved protein 397 265 Op 2 . + CDS 436263 - 437240 1041 ## COG1957 Inosine-uridine nucleoside N-ribohydrolase - Term 437147 - 437178 0.6 398 266 Op 1 . - CDS 437366 - 437527 145 ## BBPR_0451 hypothetical protein 399 266 Op 2 . - CDS 437591 - 437803 117 ## gi|224282534|ref|ZP_03645856.1| hypothetical protein BbifN4_01785 - TRNA 437995 - 438070 73.5 # Arg CCT 0 0 400 267 Tu 1 . - CDS 438061 - 438306 83 ## 401 268 Tu 1 . + CDS 438471 - 439400 1050 ## BBPR_0452 hypothetical protein 402 269 Tu 1 . - CDS 439703 - 440002 556 ## BBIF_0476 exonuclease VII, small subunit - Prom 440035 - 440094 2.1 403 270 Tu 1 . - CDS 440116 - 441531 1650 ## COG1570 Exonuclease VII, large subunit - Prom 441609 - 441668 1.6 + Prom 441430 - 441489 2.0 404 271 Op 1 12/0.000 + CDS 441738 - 444122 3901 ## COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase 405 271 Op 2 . + CDS 444277 - 444984 853 ## COG0602 Organic radical activating enzymes 406 272 Tu 1 . + CDS 445162 - 445290 130 ## BLJ_0474 hypothetical protein 407 273 Tu 1 . + CDS 445576 - 450600 7509 ## COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) + Term 450671 - 450707 1.5 - Term 450562 - 450614 5.0 408 274 Op 1 . - CDS 450623 - 451534 1071 ## BBPR_0458 hypothetical protein 409 274 Op 2 . - CDS 451610 - 453160 1689 ## COG3572 Gamma-glutamylcysteine synthetase + Prom 453033 - 453092 6.4 410 275 Tu 1 . + CDS 453262 - 458079 6628 ## BBIF_0483 conserved protein with the pectin lyase fold domain + Term 458115 - 458154 10.7 411 276 Op 1 4/0.008 + CDS 458301 - 458897 435 ## COG1846 Transcriptional regulators 412 276 Op 2 35/0.000 + CDS 458894 - 460777 2435 ## COG1132 ABC-type multidrug transport system, ATPase and permease components 413 276 Op 3 . + CDS 460774 - 462789 190 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 414 277 Op 1 . - CDS 463027 - 464013 1188 ## COG4667 Predicted esterase of the alpha-beta hydrolase superfamily 415 277 Op 2 . - CDS 464092 - 464901 729 ## COG0796 Glutamate racemase 416 277 Op 3 . - CDS 464898 - 465101 113 ## 417 278 Tu 1 . + CDS 465129 - 466028 1023 ## COG0253 Diaminopimelate epimerase + Term 466066 - 466108 8.4 - Term 466046 - 466104 12.4 418 279 Tu 1 . - CDS 466129 - 466788 801 ## COG4243 Predicted membrane protein 419 280 Tu 1 . + CDS 466924 - 467805 954 ## COG0613 Predicted metal-dependent phosphoesterases (PHP family) 420 281 Tu 1 . - CDS 468377 - 469885 1310 ## BBIF_0495 hypothetical protein 421 282 Tu 1 . + CDS 469903 - 471507 1571 ## COG0210 Superfamily I DNA and RNA helicases + Term 471513 - 471576 9.4 422 283 Tu 1 . - CDS 471565 - 473109 1949 ## COG5282 Uncharacterized conserved protein - Prom 473143 - 473202 3.2 423 284 Tu 1 . + CDS 473171 - 474019 1035 ## COG3480 Predicted secreted protein containing a PDZ domain 424 285 Tu 1 . + CDS 474224 - 474640 512 ## BBIF_0499 hypothetical protein with DUF3052 domain 425 286 Tu 1 . - CDS 474824 - 475867 1152 ## COG1609 Transcriptional regulators - Term 475871 - 475908 2.8 426 287 Op 1 . - CDS 476012 - 476464 645 ## COG0011 Uncharacterized conserved protein 427 287 Op 2 . - CDS 476490 - 477377 996 ## COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase + Prom 477373 - 477432 1.8 428 288 Tu 1 . + CDS 477494 - 478702 354 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 478759 - 478788 2.3 - Term 479076 - 479111 -0.8 429 289 Tu 1 . - CDS 479292 - 479765 373 ## BBIF_0504 hypothetical protein - Prom 479794 - 479853 2.0 - Term 479831 - 479871 12.1 430 290 Op 1 . - CDS 479888 - 482644 4304 ## COG0422 Thiamine biosynthesis protein ThiC - Term 482688 - 482731 -0.6 431 290 Op 2 . - CDS 482739 - 483632 1008 ## COG2145 Hydroxyethylthiazole kinase, sugar kinase family 432 290 Op 3 . - CDS 483669 - 483896 89 ## + Prom 483874 - 483933 3.5 433 291 Tu 1 . + CDS 484026 - 489833 9010 ## COG3250 Beta-galactosidase/beta-glucuronidase 434 292 Tu 1 . + CDS 490009 - 490263 337 ## COG0423 Glycyl-tRNA synthetase (class II) + Prom 490265 - 490324 7.9 435 293 Op 1 . + CDS 490455 - 491549 1895 ## COG0423 Glycyl-tRNA synthetase (class II) + Term 491578 - 491616 -0.9 436 293 Op 2 . + CDS 491640 - 492920 460 ## PROTEIN SUPPORTED gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase + Term 492923 - 492975 -1.0 + Prom 492968 - 493027 5.1 437 294 Op 1 . + CDS 493069 - 494349 1460 ## COG0206 Cell division GTPase 438 294 Op 2 . + CDS 494371 - 494841 484 ## COG1799 Uncharacterized protein conserved in bacteria 439 295 Tu 1 . + CDS 494969 - 495250 432 ## BBIF_0512 conserved hypothetical membrane spanning protein with YGGT family + Term 495252 - 495291 1.2 440 296 Op 1 . + CDS 495360 - 496661 1938 ## BBIF_0513 hypothetical protein with DivIVA domain 441 296 Op 2 15/0.000 + CDS 496665 - 497342 668 ## COG0597 Lipoprotein signal peptidase 442 296 Op 3 . + CDS 497339 - 498280 252 ## PROTEIN SUPPORTED gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit 443 297 Tu 1 . - CDS 498394 - 498717 247 ## BBIF_0516 hypothetical protein + Prom 498490 - 498549 2.7 444 298 Op 1 . + CDS 498774 - 498995 164 ## gi|313139733|ref|ZP_07801926.1| predicted protein 445 298 Op 2 . + CDS 498998 - 499342 461 ## BBIF_0517 hypothetical protein + Term 499348 - 499381 2.3 - Term 499674 - 499701 -0.8 446 299 Tu 1 . - CDS 499712 - 500731 1499 ## COG2171 Tetrahydrodipicolinate N-succinyltransferase - Prom 500833 - 500892 1.7 447 300 Op 1 4/0.008 + CDS 501114 - 502241 1415 ## COG1186 Protein chain release factor B 448 300 Op 2 28/0.000 + CDS 502286 - 503710 1407 ## COG2884 Predicted ATPase involved in cell division 449 300 Op 3 . + CDS 503707 - 504630 1359 ## COG2177 Cell division protein + Term 504681 - 504716 -0.9 + Prom 504678 - 504737 2.3 450 301 Op 1 . + CDS 504766 - 506256 2037 ## COG3942 Surface antigen 451 301 Op 2 . + CDS 506355 - 506834 932 ## COG0691 tmRNA-binding protein 452 301 Op 3 . + CDS 506878 - 507618 590 ## COG0564 Pseudouridylate synthases, 23S RNA-specific + Term 507667 - 507708 3.6 + Prom 507620 - 507679 3.7 453 302 Op 1 . + CDS 507715 - 507945 140 ## COG1476 Predicted transcriptional regulators 454 302 Op 2 . + CDS 507950 - 508456 149 ## + Term 508575 - 508611 -0.3 - Term 508167 - 508212 -0.9 455 303 Tu 1 . - CDS 508381 - 508587 158 ## BBIF_0526 hypothetical protein - TRNA 508898 - 508971 88.1 # Val TAC 0 0 + Prom 508944 - 509003 1.8 456 304 Op 1 . + CDS 509207 - 510781 1235 ## BBIF_0529 hypothetical protein with DivIVA domain 457 304 Op 2 . + CDS 510839 - 512029 1169 ## COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase 458 304 Op 3 . + CDS 512057 - 513409 1511 ## COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis + Term 513522 - 513561 2.8 459 305 Op 1 . + CDS 513677 - 515302 1802 ## BBIF_0532 hypothetical protein 460 305 Op 2 4/0.008 + CDS 515367 - 516149 616 ## COG1381 Recombinational DNA repair protein (RecF pathway) 461 305 Op 3 . + CDS 516154 - 516945 974 ## COG0020 Undecaprenyl pyrophosphate synthase + Term 517193 - 517234 5.6 462 306 Tu 1 . - CDS 517082 - 518056 1451 ## COG3878 Uncharacterized protein conserved in bacteria 463 307 Tu 1 . - CDS 518195 - 518359 280 ## BLJ_1363 hypothetical protein 464 308 Tu 1 . - CDS 518501 - 518725 344 ## COG1621 Beta-fructosidases (levanase/invertase) - Prom 518822 - 518881 4.4 465 309 Tu 1 . + CDS 518956 - 522525 5150 ## COG0587 DNA polymerase III, alpha subunit 466 310 Tu 1 . + CDS 522895 - 523737 794 ## BBIF_0538 hypothetical protein - Term 523743 - 523801 25.0 467 311 Tu 1 . - CDS 523828 - 524133 536 ## COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein - Prom 524318 - 524377 2.1 468 312 Tu 1 . + CDS 524321 - 526198 2475 ## COG4716 Myosin-crossreactive antigen + Term 526287 - 526326 -0.3 - Term 526122 - 526159 -1.0 469 313 Op 1 . - CDS 526251 - 526565 177 ## BBIF_0541 hypothetical protein 470 313 Op 2 . - CDS 526577 - 526675 88 ## 471 314 Tu 1 . - CDS 526784 - 527824 1149 ## BBIF_0542 hypothetical protein with helix-turn-helix motif - Prom 527885 - 527944 2.4 - Term 527861 - 527888 0.1 472 315 Tu 1 . - CDS 527964 - 528791 1080 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 473 316 Tu 1 . + CDS 529093 - 530001 1116 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 474 317 Tu 1 . + CDS 530103 - 530525 195 ## BBIF_0545 hypothetical protein 475 318 Op 1 . + CDS 530758 - 531006 225 ## BBIF_0546 hypothetical protein 476 318 Op 2 . + CDS 530997 - 531215 108 ## BBPR_0522 hypothetical protein + Term 531257 - 531307 5.1 - Term 531415 - 531461 6.4 477 319 Tu 1 . - CDS 531589 - 532632 567 ## BBIF_0548 hypothetical protein - Prom 532750 - 532809 2.2 478 320 Op 1 . + CDS 532623 - 532748 108 ## gi|313139767|ref|ZP_07801960.1| predicted protein 479 320 Op 2 . + CDS 532760 - 534142 1932 ## COG0141 Histidinol dehydrogenase 480 320 Op 3 . + CDS 534150 - 534290 98 ## 481 320 Op 4 13/0.000 + CDS 534287 - 535462 1656 ## COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 482 320 Op 5 . + CDS 535600 - 536202 924 ## COG0131 Imidazoleglycerol-phosphate dehydratase 483 320 Op 6 . + CDS 536202 - 536915 853 ## BBIF_0552 hypothetical protein 484 320 Op 7 25/0.000 + CDS 536984 - 537634 782 ## COG0118 Glutamine amidotransferase 485 320 Op 8 . + CDS 537746 - 538471 1123 ## COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 486 321 Tu 1 . - CDS 538543 - 539988 1809 ## COG4320 Uncharacterized protein conserved in bacteria - Prom 540044 - 540103 3.3 487 322 Tu 1 . + CDS 540095 - 541432 1791 ## COG0174 Glutamine synthetase + Term 541467 - 541531 23.5 - Term 541452 - 541522 22.6 488 323 Tu 1 . - CDS 541558 - 542916 1395 ## BBIF_0557 hypothetical protein with telomeric repeat-binding factor 2 domain 489 324 Tu 1 . + CDS 543137 - 543508 523 ## BBIF_0558 major facilitator superfamily MFS 1 490 325 Tu 1 . - CDS 543471 - 544517 1108 ## BBPR_0534 hypothetical protein - Prom 544587 - 544646 4.8 491 326 Op 1 . - CDS 544648 - 548706 5051 ## COG1643 HrpA-like helicases 492 326 Op 2 . - CDS 548711 - 549364 820 ## COG2813 16S RNA G1207 methylase RsmC 493 327 Op 1 . + CDS 549383 - 549613 128 ## 494 327 Op 2 . + CDS 549597 - 550526 913 ## BBPR_0537 hypothetical protein 495 328 Tu 1 . + CDS 550784 - 552286 623 ## PROTEIN SUPPORTED gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 496 329 Tu 1 . - CDS 552327 - 552479 72 ## + Prom 552378 - 552437 2.0 497 330 Tu 1 . + CDS 552478 - 553440 1411 ## COG0039 Malate/lactate dehydrogenases + Prom 553710 - 553769 1.6 498 331 Tu 1 . + CDS 553810 - 554748 895 ## COG1230 Co/Zn/Cd efflux system component - Term 554771 - 554824 3.0 499 332 Tu 1 . - CDS 554883 - 555584 618 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) - Prom 555605 - 555664 2.7 500 333 Op 1 . + CDS 555947 - 556231 301 ## BBIF_0567 hypothetical protein with peptidoglycan-binding LysM domain 501 333 Op 2 . + CDS 556261 - 556842 507 ## COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains + Term 557070 - 557103 1.4 502 334 Op 1 . - CDS 557022 - 558221 1578 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases 503 334 Op 2 . - CDS 558232 - 560511 2343 ## COG3973 Superfamily I DNA and RNA helicases 504 334 Op 3 . - CDS 560537 - 560848 127 ## + Prom 560451 - 560510 1.6 505 335 Op 1 29/0.000 + CDS 560730 - 561236 664 ## COG2001 Uncharacterized protein conserved in bacteria 506 335 Op 2 . + CDS 561236 - 562348 870 ## COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis 507 335 Op 3 . + CDS 562348 - 562818 669 ## BBIF_0573 hypothetical protein 508 335 Op 4 . + CDS 562815 - 564629 2479 ## COG0768 Cell division protein FtsI/penicillin-binding protein 2 509 335 Op 5 . + CDS 564692 - 565720 922 ## BBIF_0575 hypothetical protein 510 335 Op 6 28/0.000 + CDS 565738 - 567276 1346 ## COG0770 UDP-N-acetylmuramyl pentapeptide synthase 511 335 Op 7 28/0.000 + CDS 567294 - 568400 1595 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 512 335 Op 8 25/0.000 + CDS 568511 - 569941 1622 ## COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase 513 335 Op 9 31/0.000 + CDS 569931 - 571265 1026 ## COG0772 Bacterial cell division membrane protein + Term 571341 - 571368 0.1 + Prom 571289 - 571348 2.0 514 335 Op 10 26/0.000 + CDS 571391 - 572560 1081 ## COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 515 335 Op 11 5/0.000 + CDS 572631 - 574220 1252 ## COG0773 UDP-N-acetylmuramate-alanine ligase 516 335 Op 12 . + CDS 574472 - 575473 194 ## PROTEIN SUPPORTED gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 517 336 Tu 1 . + CDS 575591 - 575782 239 ## BAD_1097 DEAD/DEAH box helicase-like + Term 575978 - 576008 1.1 518 337 Tu 1 . - CDS 576045 - 576500 554 ## BBIF_0583 hypothetical protein + Prom 576525 - 576584 2.3 519 338 Tu 1 . + CDS 576619 - 577149 636 ## COG1490 D-Tyr-tRNAtyr deacylase + Term 577220 - 577250 0.1 - Term 577265 - 577323 8.1 520 339 Op 1 2/0.023 - CDS 577366 - 578649 1936 ## COG0738 Fucose permease 521 339 Op 2 . - CDS 578718 - 579614 1324 ## COG0524 Sugar kinases, ribokinase family 522 340 Tu 1 . - CDS 579719 - 580927 1624 ## COG1940 Transcriptional regulator/sugar kinase - Prom 581003 - 581062 7.4 + Prom 580962 - 581021 4.1 523 341 Tu 1 . + CDS 581048 - 581905 813 ## COG3142 Uncharacterized protein involved in copper resistance - Term 581904 - 581933 2.8 524 342 Tu 1 . - CDS 581949 - 583088 1174 ## COG1940 Transcriptional regulator/sugar kinase - Prom 583188 - 583247 2.4 + Prom 583166 - 583225 4.3 525 343 Op 1 12/0.000 + CDS 583339 - 584151 1294 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 526 343 Op 2 . + CDS 584289 - 585545 1668 ## COG1820 N-acetylglucosamine-6-phosphate deacetylase + Prom 585626 - 585685 1.5 527 344 Op 1 38/0.000 + CDS 585815 - 587500 2651 ## COG0747 ABC-type dipeptide transport system, periplasmic component 528 344 Op 2 49/0.000 + CDS 587656 - 588744 1552 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 529 344 Op 3 13/0.000 + CDS 588746 - 589897 1744 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 530 344 Op 4 . + CDS 589890 - 591623 756 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 531 345 Op 1 . + CDS 591792 - 593390 2370 ## COG0006 Xaa-Pro aminopeptidase 532 345 Op 2 . + CDS 593464 - 593985 675 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 594031 - 594094 10.0 - Term 594018 - 594080 13.6 533 346 Tu 1 . - CDS 594167 - 594268 112 ## - Prom 594484 - 594543 1.9 534 347 Op 1 . + CDS 594542 - 596182 2092 ## COG0285 Folylpolyglutamate synthase 535 347 Op 2 . + CDS 596188 - 599850 3830 ## COG1196 Chromosome segregation ATPases - Term 599854 - 599906 3.2 536 348 Op 1 1/0.062 - CDS 600024 - 600716 973 ## COG1794 Aspartate racemase 537 348 Op 2 . - CDS 600775 - 601959 1691 ## COG3919 Predicted ATP-grasp enzyme - Prom 602043 - 602102 3.0 + Prom 602098 - 602157 2.9 538 349 Tu 1 . + CDS 602189 - 603394 1113 ## BBIF_0603 hypothetical protein + Term 603544 - 603581 3.1 539 350 Op 1 . - CDS 603471 - 604469 1393 ## BBPR_0580 cell wall biosynthesis-associated protein 540 350 Op 2 . - CDS 604514 - 606073 2170 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase - Prom 606097 - 606156 2.9 + Prom 606135 - 606194 4.8 541 351 Op 1 . + CDS 606219 - 606926 616 ## COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 542 351 Op 2 . + CDS 607024 - 607287 140 ## BBPR_0583 hypothetical protein + Term 607374 - 607429 12.2 - Term 607360 - 607415 7.8 543 352 Tu 1 . - CDS 607481 - 607555 198 ## - Prom 607585 - 607644 3.6 544 353 Op 1 . - CDS 607662 - 608630 1138 ## COG2017 Galactose mutarotase and related enzymes 545 353 Op 2 . - CDS 608725 - 608916 57 ## + Prom 608612 - 608671 3.0 546 354 Op 1 . + CDS 608849 - 609838 380 ## PROTEIN SUPPORTED gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 547 354 Op 2 . + CDS 609899 - 610114 222 ## BBIF_0610 amylopullulanase 548 354 Op 3 . + CDS 610258 - 610776 724 ## COG2606 Uncharacterized conserved protein + Term 610825 - 610892 26.2 - Term 610814 - 610881 29.0 549 355 Op 1 . - CDS 610915 - 611970 1547 ## COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase - Prom 612082 - 612141 3.4 - Term 612088 - 612128 4.5 550 355 Op 2 . - CDS 612177 - 612905 794 ## COG1564 Thiamine pyrophosphokinase + Prom 612869 - 612928 1.7 551 356 Tu 1 . + CDS 612998 - 613393 382 ## BBIF_0614 hypothetical protein + Term 613484 - 613532 5.0 - Term 613394 - 613420 0.1 552 357 Tu 1 . - CDS 613459 - 613617 62 ## gi|224282676|ref|ZP_03645998.1| hypothetical protein BbifN4_02509 553 358 Op 1 . + CDS 613616 - 614311 906 ## COG0290 Translation initiation factor 3 (IF-3) 554 358 Op 2 . + CDS 614330 - 614524 316 ## PROTEIN SUPPORTED gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 555 358 Op 3 . + CDS 614572 - 614955 636 ## PROTEIN SUPPORTED gi|224282679|ref|ZP_03646001.1| 50S ribosomal protein L20 + Term 615008 - 615036 1.3 556 359 Op 1 1/0.062 + CDS 615104 - 616072 991 ## COG4974 Site-specific recombinase XerD 557 359 Op 2 3/0.016 + CDS 616134 - 617153 1094 ## COG1192 ATPases involved in chromosome partitioning 558 359 Op 3 21/0.000 + CDS 617190 - 618044 675 ## COG1354 Uncharacterized conserved protein + Prom 618054 - 618113 3.5 559 359 Op 4 . + CDS 618141 - 618713 696 ## COG1386 Predicted transcriptional regulator containing the HTH domain + Term 618742 - 618770 -0.2 + Prom 618790 - 618849 1.6 560 360 Tu 1 . + CDS 618887 - 619699 751 ## COG1051 ADP-ribose pyrophosphatase 561 361 Op 1 10/0.000 + CDS 619817 - 621097 1935 ## COG0379 Quinolinate synthase 562 361 Op 2 13/0.000 + CDS 621150 - 622799 1949 ## COG0029 Aspartate oxidase 563 361 Op 3 1/0.062 + CDS 622933 - 623826 426 ## PROTEIN SUPPORTED gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 564 361 Op 4 . + CDS 623829 - 625106 1196 ## COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes + Term 625108 - 625163 0.2 565 361 Op 5 . + CDS 625287 - 627209 3048 ## COG1217 Predicted membrane GTPase involved in stress response + Term 627314 - 627380 30.0 - Term 627188 - 627217 2.1 566 362 Tu 1 . - CDS 627361 - 627531 113 ## - Prom 627574 - 627633 1.6 567 363 Op 1 . + CDS 627627 - 627863 87 ## 568 363 Op 2 . + CDS 627847 - 628380 458 ## BBPR_0604 hypothetical protein 569 363 Op 3 . + CDS 628380 - 629408 751 ## COG0077 Prephenate dehydratase 570 363 Op 4 . + CDS 629402 - 630439 984 ## COG0287 Prephenate dehydrogenase - Term 630452 - 630499 1.7 571 364 Tu 1 . - CDS 630513 - 630764 319 ## BBIF_0631 hypothetical protein 572 365 Tu 1 . + CDS 630850 - 631854 892 ## COG0582 Integrase + Prom 632033 - 632092 4.3 573 366 Op 1 49/0.000 + CDS 632251 - 633234 188 ## PROTEIN SUPPORTED gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 574 366 Op 2 13/0.000 + CDS 633256 - 634200 1190 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 575 366 Op 3 11/0.000 + CDS 634218 - 636416 739 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 636498 - 636526 0.7 + Prom 636458 - 636517 2.8 576 366 Op 4 . + CDS 636589 - 638370 2712 ## COG0747 ABC-type dipeptide transport system, periplasmic component 577 366 Op 5 . + CDS 638451 - 638525 63 ## + Term 638627 - 638661 3.0 - Term 638397 - 638444 12.6 578 367 Tu 1 . - CDS 638566 - 639978 1986 ## COG3579 Aminopeptidase C - Prom 640118 - 640177 1.7 579 368 Tu 1 . + CDS 640125 - 640982 1066 ## COG0708 Exonuclease III 580 369 Op 1 . + CDS 641122 - 641943 1243 ## BBIF_0639 hypothetical protein 581 369 Op 2 . + CDS 641983 - 642756 1067 ## BBIF_0640 conserved hypothetical membrane spanning protein 582 369 Op 3 . + CDS 642782 - 644044 1179 ## COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 583 369 Op 4 . + CDS 644094 - 644663 659 ## BBIF_0642 conserved hypothetical secreted protein + Term 644726 - 644786 2.1 + Prom 644728 - 644787 2.1 584 370 Op 1 . + CDS 644961 - 647501 2885 ## COG0474 Cation transport ATPase 585 370 Op 2 . + CDS 647538 - 650279 4004 ## COG1048 Aconitase A + Term 650287 - 650330 13.3 + Prom 650392 - 650451 2.6 586 371 Tu 1 . + CDS 650588 - 651484 607 ## BBIF_0645 hypothetical protein - Term 651772 - 651819 10.9 587 372 Op 1 . - CDS 651841 - 653703 2485 ## COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase 588 372 Op 2 . - CDS 653712 - 653912 58 ## - Prom 653943 - 654002 1.6 + Prom 653695 - 653754 3.7 589 373 Tu 1 . + CDS 653913 - 654257 660 ## COG1758 DNA-directed RNA polymerase, subunit K/omega + Term 654369 - 654416 4.1 + Prom 654402 - 654461 2.4 590 374 Tu 1 . + CDS 654508 - 655725 1918 ## COG0192 S-adenosylmethionine synthetase - Term 655516 - 655550 -0.2 591 375 Tu 1 . - CDS 655706 - 655834 98 ## 592 376 Tu 1 . + CDS 655913 - 658153 1412 ## COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase + Term 658174 - 658222 -0.0 593 377 Tu 1 . - CDS 658090 - 658338 68 ## gi|313139870|ref|ZP_07802063.1| predicted protein 594 378 Tu 1 . - CDS 658612 - 658854 130 ## BBIF_0650 hypothetical protein 595 379 Tu 1 . + CDS 658868 - 659587 1107 ## COG1011 Predicted hydrolase (HAD superfamily) 596 380 Tu 1 . + CDS 659678 - 660652 1035 ## COG0223 Methionyl-tRNA formyltransferase + Term 660873 - 660921 -0.9 597 381 Tu 1 . - CDS 660842 - 661597 876 ## COG0560 Phosphoserine phosphatase - Prom 661806 - 661865 3.0 598 382 Op 1 . + CDS 661635 - 661808 111 ## 599 382 Op 2 . + CDS 661805 - 663508 2028 ## COG0464 ATPases of the AAA+ class 600 382 Op 3 . + CDS 663505 - 665145 1668 ## BBIF_0655 hypothetical protein with Pup-ligase protein domain 601 383 Tu 1 . + CDS 665292 - 666125 922 ## COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 602 384 Op 1 . + CDS 666279 - 666482 367 ## BBIF_0657 hypothetical protein with DUF797 domain 603 384 Op 2 . + CDS 666482 - 667939 1326 ## BBPR_0634 hypothetical protein + Term 668024 - 668063 6.1 - Term 668012 - 668050 5.1 604 385 Tu 1 . - CDS 668102 - 668383 480 ## COG0776 Bacterial nucleoid DNA-binding protein - Prom 668431 - 668490 2.7 605 386 Op 1 . - CDS 668516 - 671020 2889 ## COG0392 Predicted integral membrane protein 606 386 Op 2 . - CDS 671073 - 672509 2260 ## COG0015 Adenylosuccinate lyase 607 387 Op 1 . - CDS 672669 - 674204 1524 ## BBPR_0638 hypothetical protein 608 387 Op 2 . - CDS 674201 - 674464 207 ## BBPR_0639 hypothetical protein - Term 674987 - 675024 2.0 609 388 Op 1 . - CDS 675108 - 675698 818 ## BBIF_0664 hypothetical protein 610 388 Op 2 . - CDS 675725 - 676753 1225 ## COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 611 388 Op 3 . - CDS 676750 - 677823 1030 ## BBPR_0643 hypothetical protein 612 388 Op 4 . - CDS 677823 - 678395 550 ## BBIF_0667 hypothetical protein 613 388 Op 5 . - CDS 678392 - 679381 1039 ## BBIF_0668 hypothetical protein 614 388 Op 6 . - CDS 679378 - 680484 1310 ## COG0714 MoxR-like ATPases 615 388 Op 7 . - CDS 680495 - 681250 684 ## COG0692 Uracil DNA glycosylase + Prom 681051 - 681110 2.1 616 389 Op 1 . + CDS 681164 - 681364 70 ## 617 389 Op 2 . + CDS 681367 - 682113 747 ## BBIF_0671 hypothetical protein + Prom 682127 - 682186 3.8 618 390 Tu 1 . + CDS 682269 - 682472 415 ## COG1278 Cold shock proteins + Term 682498 - 682542 13.7 619 391 Tu 1 . - CDS 682462 - 682773 127 ## gi|313139894|ref|ZP_07802087.1| predicted protein + Prom 682607 - 682666 2.6 620 392 Tu 1 . + CDS 682772 - 684397 1485 ## PROTEIN SUPPORTED gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 + Term 684474 - 684525 10.5 - Term 684334 - 684385 7.5 621 393 Tu 1 . - CDS 684558 - 684851 430 ## BBIF_0674 hypothetical protein with DUF909 domain 622 394 Op 1 . + CDS 684924 - 686069 1052 ## BBIF_0675 hypothetical protein 623 394 Op 2 40/0.000 + CDS 686053 - 686790 989 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 624 394 Op 3 1/0.062 + CDS 686801 - 688750 2167 ## COG0642 Signal transduction histidine kinase + Term 688755 - 688794 3.3 625 395 Op 1 . + CDS 688867 - 689256 481 ## COG1278 Cold shock proteins 626 395 Op 2 . + CDS 689275 - 690348 1202 ## BBPR_0656 hypothetical protein + Term 690415 - 690463 13.0 - Term 690403 - 690451 16.2 627 396 Tu 1 . - CDS 690499 - 691494 1114 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins - Prom 691549 - 691608 2.2 + Prom 691470 - 691529 5.5 628 397 Tu 1 . + CDS 691631 - 694207 2407 ## PROTEIN SUPPORTED gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 629 398 Tu 1 . - CDS 694368 - 694583 89 ## - Prom 694603 - 694662 1.8 630 399 Op 1 . + CDS 694567 - 694782 230 ## BBIF_0682 hypothetical protein 631 399 Op 2 . + CDS 694758 - 694985 228 ## BBPR_0660 hypothetical protein 632 400 Tu 1 . - CDS 694999 - 695136 63 ## BBIF_0684 hypothetical protein 633 401 Tu 1 . + CDS 695185 - 695388 255 ## gi|224282747|ref|ZP_03646069.1| Signal transduction histidine kinase-like protein + Term 695616 - 695648 1.0 - Term 695414 - 695454 -1.0 634 402 Tu 1 . - CDS 695551 - 696972 2041 ## BBIF_0685 hypothetical protein with DUF349 domain - Prom 697041 - 697100 3.8 + Prom 696967 - 697026 6.2 635 403 Op 1 13/0.000 + CDS 697061 - 698455 1941 ## COG0124 Histidyl-tRNA synthetase 636 403 Op 2 . + CDS 698539 - 700335 2475 ## COG0173 Aspartyl-tRNA synthetase + Term 700363 - 700405 13.2 + Prom 700412 - 700471 1.9 637 404 Tu 1 . + CDS 700720 - 701184 239 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 638 405 Op 1 . + CDS 701289 - 701768 526 ## COG2606 Uncharacterized conserved protein 639 405 Op 2 16/0.000 + CDS 701863 - 702663 271 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 640 405 Op 3 31/0.000 + CDS 702679 - 703518 1342 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 641 405 Op 4 17/0.000 + CDS 703520 - 704197 1114 ## COG0765 ABC-type amino acid transport system, permease component 642 405 Op 5 . + CDS 704202 - 705290 1402 ## COG0765 ABC-type amino acid transport system, permease component 643 406 Op 1 . + CDS 705459 - 706496 1185 ## COG2326 Uncharacterized conserved protein 644 406 Op 2 . + CDS 706554 - 709115 3720 ## COG4581 Superfamily II RNA helicase + Term 709171 - 709210 5.9 - Term 708960 - 708997 -0.1 645 407 Tu 1 . - CDS 709102 - 709215 59 ## 646 408 Tu 1 . + CDS 709214 - 710620 1549 ## COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase 647 409 Tu 1 . - CDS 710590 - 710790 123 ## 648 410 Tu 1 . + CDS 710794 - 712260 1685 ## COG0477 Permeases of the major facilitator superfamily + Term 712351 - 712407 1.0 649 411 Tu 1 . - CDS 712285 - 714750 2028 ## COG1122 ABC-type cobalt transport system, ATPase component 650 412 Tu 1 . - CDS 714927 - 715547 763 ## COG3601 Predicted membrane protein + Prom 715814 - 715873 3.4 651 413 Tu 1 . + CDS 715922 - 716683 1201 ## COG1940 Transcriptional regulator/sugar kinase - Term 716572 - 716615 -0.6 652 414 Tu 1 . - CDS 716665 - 716856 89 ## 653 415 Tu 1 . + CDS 716777 - 717967 1403 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase + Term 717985 - 718038 -0.4 654 416 Op 1 . - CDS 718092 - 718880 882 ## COG1122 ABC-type cobalt transport system, ATPase component - Term 718921 - 718966 6.3 655 416 Op 2 . - CDS 718973 - 719392 533 ## BBIF_0703 hypothetical protein with arylsulfotransferase domain (ASST) - Prom 719493 - 719552 1.6 656 417 Tu 1 . - CDS 719562 - 721754 2528 ## BBPR_0683 hypothetical protein - Prom 721784 - 721843 3.2 + Prom 721743 - 721802 1.5 657 418 Op 1 . + CDS 721835 - 725314 3536 ## BBPR_0684 hypothetical protein + Term 725315 - 725355 0.7 658 418 Op 2 . + CDS 725401 - 728103 2676 ## COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) 659 419 Tu 1 . + CDS 728330 - 729454 1388 ## COG0489 ATPases involved in chromosome partitioning + Term 729510 - 729550 0.2 660 420 Tu 1 . - CDS 729582 - 730415 651 ## BBPR_0687 hypothetical protein 661 421 Tu 1 . + CDS 730303 - 730545 162 ## + Term 730623 - 730669 3.0 662 422 Tu 1 . + CDS 730981 - 732273 1489 ## COG0582 Integrase 663 423 Tu 1 . - CDS 732270 - 732437 181 ## gi|224282773|ref|ZP_03646095.1| hypothetical protein BbifN4_02994 664 424 Op 1 . + CDS 732569 - 732943 432 ## gi|224282774|ref|ZP_03646096.1| hypothetical protein BbifN4_02999 665 424 Op 2 . + CDS 733042 - 734274 819 ## COG0675 Transposase and inactivated derivatives 666 425 Tu 1 . + CDS 734351 - 735433 1534 ## BLLJ_1040 hypothetical protein + Term 735574 - 735601 -0.8 - Term 735357 - 735392 3.0 667 426 Tu 1 . - CDS 735568 - 735879 339 ## RER_00400 hypothetical protein + Prom 735980 - 736039 1.6 668 427 Op 1 . + CDS 736078 - 736230 129 ## gi|224282778|ref|ZP_03646100.1| hypothetical protein BbifN4_03019 669 427 Op 2 4/0.008 + CDS 736231 - 739143 3387 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 670 427 Op 3 . + CDS 739150 - 740724 2008 ## COG0286 Type I restriction-modification system methyltransferase subunit 671 427 Op 4 . + CDS 740775 - 741596 410 ## gi|313139940|ref|ZP_07802133.1| predicted protein 672 427 Op 5 . + CDS 741599 - 742792 510 ## COG0732 Restriction endonuclease S subunits + Term 742921 - 742955 1.5 673 428 Tu 1 . - CDS 742974 - 743177 154 ## 674 429 Tu 1 . + CDS 743083 - 743586 287 ## Corgl_0421 CRISPR-associated protein, Cse1 family + Term 743612 - 743656 -0.4 675 430 Op 1 . + CDS 744013 - 744201 62 ## 676 430 Op 2 . + CDS 744210 - 744428 315 ## BLLJ_0547 hypothetical protein + Term 744434 - 744478 10.3 - Term 744418 - 744469 11.3 677 431 Tu 1 . - CDS 744562 - 746010 2212 ## COG0174 Glutamine synthetase - Prom 746052 - 746111 5.2 - Term 746236 - 746274 -0.5 678 432 Tu 1 . - CDS 746326 - 747123 1277 ## BBPR_0689 hypothetical protein - Prom 747158 - 747217 2.4 - Term 747155 - 747197 -0.6 679 433 Tu 1 . - CDS 747230 - 748720 571 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Term 748910 - 748951 10.9 680 434 Tu 1 . - CDS 748973 - 749575 892 ## BBIF_0722 conserved hypothetical membrane spanning protein + Prom 749581 - 749640 3.3 681 435 Tu 1 . + CDS 749718 - 751085 1934 ## COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases + Term 751179 - 751210 -0.3 682 436 Tu 1 . + CDS 751252 - 751410 79 ## + Term 751427 - 751477 2.2 683 437 Op 1 . + CDS 751601 - 752701 877 ## BBIF_0724 hypothetical protein 684 437 Op 2 . + CDS 752701 - 753519 723 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 685 437 Op 3 . + CDS 753516 - 754598 1113 ## BBPR_0695 hypothetical protein 686 438 Tu 1 . - CDS 754613 - 755899 1516 ## COG1472 Beta-glucosidase-related glycosidases - Prom 756130 - 756189 1.6 687 439 Tu 1 . + CDS 756016 - 759264 4407 ## COG1615 Uncharacterized conserved protein + Term 759291 - 759331 11.2 - Term 759269 - 759311 -0.4 688 440 Tu 1 . - CDS 759319 - 759501 88 ## - Term 759541 - 759573 -1.0 689 441 Tu 1 . - CDS 759772 - 760893 1544 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC - Prom 760953 - 761012 3.9 + Prom 760912 - 760971 2.2 690 442 Op 1 . + CDS 761026 - 762912 2072 ## COG1887 Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC 691 442 Op 2 . + CDS 762933 - 764102 1307 ## BBIF_0731 hypothetical protein with acyltransferase family domain 692 442 Op 3 . + CDS 764092 - 764343 250 ## BBPR_0701 hypothetical protein 693 442 Op 4 . + CDS 764423 - 764638 140 ## BBPR_0701 hypothetical protein 694 443 Op 1 . + CDS 764780 - 765496 293 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 695 443 Op 2 1/0.062 + CDS 765523 - 766566 1212 ## COG0451 Nucleoside-diphosphate-sugar epimerases 696 443 Op 3 26/0.000 + CDS 766620 - 767426 1092 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 697 443 Op 4 . + CDS 767449 - 768207 183 ## PROTEIN SUPPORTED gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 + Term 768338 - 768382 0.2 698 444 Op 1 . + CDS 768561 - 769115 593 ## COG1247 Sortase and related acyltransferases 699 444 Op 2 7/0.000 + CDS 769119 - 769718 917 ## COG0193 Peptidyl-tRNA hydrolase 700 444 Op 3 . + CDS 769708 - 773307 4370 ## COG1197 Transcription-repair coupling factor (superfamily II helicase) 701 444 Op 4 9/0.000 + CDS 773307 - 774821 1062 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 702 444 Op 5 . + CDS 774814 - 775602 627 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Prom 775703 - 775762 2.1 703 445 Op 1 . + CDS 775800 - 777098 2053 ## COG0148 Enolase 704 445 Op 2 . + CDS 777141 - 777722 589 ## BBIF_0743 conserved hypothetical membrane spanning protein with septum formation initiator domain 705 445 Op 3 4/0.008 + CDS 777809 - 778396 549 ## COG1507 Uncharacterized conserved protein 706 445 Op 4 . + CDS 778546 - 779544 927 ## COG0248 Exopolyphosphatase + Term 779634 - 779693 9.4 + TRNA 779588 - 779671 66.0 # Leu TAA 0 0 + Prom 779596 - 779655 80.4 707 446 Op 1 . + CDS 779744 - 780313 575 ## BBIF_0746 conserved hypothetical membrane spanning protein 708 446 Op 2 . + CDS 780482 - 781942 1456 ## COG1760 L-serine deaminase + Term 781943 - 781988 -0.9 709 447 Op 1 . + CDS 782103 - 782507 511 ## COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 710 447 Op 2 . + CDS 782566 - 783045 819 ## COG0782 Transcription elongation factor + Term 783049 - 783091 1.5 711 448 Tu 1 . - CDS 783342 - 783488 107 ## 712 449 Tu 1 . - CDS 783927 - 784814 1023 ## COG1272 Predicted membrane protein, hemolysin III homolog 713 450 Tu 1 . + CDS 784942 - 786438 1872 ## COG3920 Signal transduction histidine kinase + Term 786481 - 786521 7.3 714 451 Tu 1 . - CDS 786573 - 786851 328 ## BBIF_0754 cell division transcription factor WhmD - Prom 786902 - 786961 2.2 715 452 Tu 1 . - CDS 786967 - 788784 1234 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins 716 453 Op 1 . - CDS 789045 - 790520 1521 ## COG1316 Transcriptional regulator 717 453 Op 2 . - CDS 790564 - 790746 132 ## + Prom 790515 - 790574 1.5 718 454 Op 1 . + CDS 790745 - 791101 558 ## BBIF_0757 transcription factor WhiB 719 454 Op 2 . + CDS 791135 - 794284 3095 ## BBIF_0758 conserved hypothetical membrane spanning protein 720 454 Op 3 . + CDS 794281 - 795792 1309 ## BBPR_0728 hypothetical protein + Term 795955 - 795992 3.5 721 455 Tu 1 . - CDS 795865 - 796293 290 ## BBPR_0729 hypothetical protein 722 456 Tu 1 . + CDS 796372 - 797199 710 ## COG0561 Predicted hydrolases of the HAD superfamily 723 457 Tu 1 . + CDS 797593 - 797919 241 ## BBPR_0731 putative phosphoribosyltransferase - Term 797901 - 797961 27.1 724 458 Op 1 . - CDS 798026 - 798421 380 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) 725 458 Op 2 40/0.000 - CDS 798490 - 799596 1220 ## COG0642 Signal transduction histidine kinase 726 458 Op 3 . - CDS 799596 - 800315 1077 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 727 458 Op 4 . - CDS 800329 - 802584 3233 ## COG0296 1,4-alpha-glucan branching enzyme 728 458 Op 5 . - CDS 802559 - 802753 138 ## + Prom 802623 - 802682 5.7 729 459 Op 1 1/0.062 + CDS 802712 - 803308 799 ## COG1329 Transcriptional regulators, similar to M. xanthus CarD 730 459 Op 2 . + CDS 803327 - 803803 175 ## COG0245 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 731 460 Op 1 42/0.000 - CDS 803814 - 804650 1291 ## COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components 732 460 Op 2 25/0.000 - CDS 804647 - 805537 1130 ## COG1121 ABC-type Mn/Zn transport systems, ATPase component 733 460 Op 3 . - CDS 805705 - 806748 1299 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin 734 461 Tu 1 . + CDS 806862 - 807737 1089 ## COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase + Term 807808 - 807841 2.2 735 462 Tu 1 . + CDS 807885 - 809357 2486 ## PROTEIN SUPPORTED gi|224282840|ref|ZP_03646162.1| 30S ribosomal protein S1 + Term 809416 - 809458 9.1 - Term 809240 - 809270 0.3 736 463 Tu 1 . - CDS 809339 - 809956 134 ## gi|313139999|ref|ZP_07802192.1| predicted protein 737 464 Tu 1 . + CDS 809681 - 810289 613 ## COG0237 Dephospho-CoA kinase + Term 810365 - 810399 -0.7 + Prom 810360 - 810419 1.7 738 465 Op 1 . + CDS 810468 - 812579 3018 ## COG0556 Helicase subunit of the DNA excision repair complex 739 465 Op 2 . + CDS 812615 - 813616 1367 ## COG0861 Membrane protein TerC, possibly involved in tellurium resistance + Prom 813666 - 813725 1.9 740 466 Tu 1 . + CDS 813758 - 815200 2319 ## COG0469 Pyruvate kinase + Term 815342 - 815382 1.9 - Term 815241 - 815296 14.2 741 467 Tu 1 . - CDS 815409 - 816014 630 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - Prom 816247 - 816306 76.4 + TRNA 816233 - 816306 48.2 # Leu CAA 0 0 + Prom 816232 - 816291 76.1 742 468 Op 1 . + CDS 816416 - 817192 1042 ## COG3707 Response regulator with putative antiterminator output domain 743 468 Op 2 . + CDS 817189 - 820020 3512 ## COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains 744 468 Op 3 . + CDS 820078 - 820995 926 ## COG0327 Uncharacterized conserved protein 745 468 Op 4 . + CDS 821049 - 821780 641 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 746 468 Op 5 . + CDS 821813 - 823984 2698 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases + Term 824198 - 824236 -0.7 - Term 823855 - 823888 0.4 747 469 Tu 1 . - CDS 824060 - 825532 1431 ## BBIF_0784 conserved hypothetical membrane spanning protein + TRNA 825767 - 825843 86.8 # Pro TGG 0 0 + Prom 825769 - 825828 79.3 748 470 Tu 1 . + CDS 826072 - 826239 183 ## gi|224282852|ref|ZP_03646174.1| hypothetical protein BbifN4_03389 - Term 826506 - 826545 1.0 749 471 Op 1 . - CDS 826549 - 826827 161 ## gi|224282853|ref|ZP_03646175.1| hypothetical protein BbifN4_03394 750 471 Op 2 . - CDS 826876 - 827106 199 ## gi|224282854|ref|ZP_03646176.1| hypothetical protein BbifN4_03399 751 472 Tu 1 . - CDS 827343 - 827540 352 ## gi|224282855|ref|ZP_03646177.1| hypothetical protein BbifN4_03404 752 473 Tu 1 . - CDS 827675 - 828112 462 ## Dalk_0850 MarR family transcriptional regulator 753 474 Tu 1 . - CDS 828226 - 828627 678 ## COG0789 Predicted transcriptional regulators + Prom 828675 - 828734 2.1 754 475 Tu 1 . + CDS 828793 - 829653 1204 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 755 476 Tu 1 . + CDS 829779 - 830327 957 ## COG0693 Putative intracellular protease/amidase 756 477 Tu 1 . - CDS 830422 - 831114 667 ## Closa_2529 hypothetical protein 757 478 Tu 1 . - CDS 831271 - 832083 579 ## gi|224282861|ref|ZP_03646183.1| hypothetical protein BbifN4_03434 - Term 832405 - 832438 -0.4 758 479 Tu 1 . - CDS 832561 - 833178 561 ## COG3340 Peptidase E 759 480 Tu 1 . + CDS 833219 - 834730 1204 ## COG0128 5-enolpyruvylshikimate-3-phosphate synthase + Term 834746 - 834814 24.2 - Term 834732 - 834796 10.2 760 481 Op 1 21/0.000 - CDS 834844 - 836073 1866 ## COG0282 Acetate kinase - Prom 836121 - 836180 3.4 761 481 Op 2 . - CDS 836354 - 838024 2540 ## COG0280 Phosphotransacetylase 762 482 Tu 1 . - CDS 838165 - 839799 1979 ## COG4868 Uncharacterized protein conserved in bacteria + Prom 840082 - 840141 5.5 763 483 Tu 1 . + CDS 840211 - 840564 219 ## BBIF_0791 hypothetical protein 764 484 Op 1 . - CDS 840669 - 840866 134 ## BBIF_0792 hypothetical protein 765 484 Op 2 . - CDS 840887 - 841528 391 ## BBIF_0793 hypothetical protein with DUF1294 domain - Prom 841554 - 841613 2.7 766 485 Tu 1 . - CDS 841956 - 842258 116 ## 767 486 Tu 1 . + CDS 842140 - 842358 208 ## BBIF_0794 hypothetical protein 768 487 Tu 1 . - CDS 842328 - 842543 56 ## gi|224282871|ref|ZP_03646193.1| hypothetical protein BbifN4_03484 769 488 Tu 1 . + CDS 842464 - 842751 235 ## BBIF_0795 hypothetical protein - Term 842603 - 842667 6.5 770 489 Tu 1 . - CDS 842717 - 842971 224 ## gi|313140032|ref|ZP_07802225.1| predicted protein - Prom 843002 - 843061 2.6 771 490 Tu 1 . + CDS 842792 - 843334 206 ## BBIF_0796 hypothetical protein + Term 843467 - 843520 7.7 772 491 Op 1 . - CDS 843268 - 843480 83 ## 773 491 Op 2 . - CDS 843551 - 843820 300 ## - Term 843822 - 843859 3.7 774 491 Op 3 . - CDS 843875 - 845437 2440 ## COG0519 GMP synthase, PP-ATPase domain/subunit 775 492 Tu 1 . + CDS 845482 - 845646 73 ## + Prom 845751 - 845810 4.3 776 493 Tu 1 . + CDS 845966 - 848443 3486 ## COG3957 Phosphoketolase + Term 848479 - 848516 9.4 777 494 Op 1 21/0.000 + CDS 848682 - 849743 1362 ## COG0306 Phosphate/sulphate permeases 778 494 Op 2 . + CDS 849794 - 850417 787 ## COG1392 Phosphate transport regulator (distant homolog of PhoU) - Term 850229 - 850292 4.2 779 495 Op 1 19/0.000 - CDS 850466 - 851158 927 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 780 495 Op 2 . - CDS 851155 - 852438 713 ## COG4585 Signal transduction histidine kinase 781 496 Tu 1 . + CDS 852501 - 852764 413 ## BBIF_0803 calcium-transporting ATPase + Term 852824 - 852856 -0.8 782 497 Tu 1 . + CDS 852908 - 853891 1204 ## COG1131 ABC-type multidrug transport system, ATPase component 783 498 Op 1 . + CDS 854008 - 855255 993 ## BBIF_0805 conserved hypothetical membrane spanning protein 784 498 Op 2 . + CDS 855242 - 856681 1045 ## BBIF_0806 conserved hypothetical membrane spanning protein 785 499 Op 1 . - CDS 856686 - 858164 1638 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 786 499 Op 2 . - CDS 858337 - 858837 188 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase - Prom 858899 - 858958 80.3 787 500 Tu 1 . - CDS 859260 - 859388 176 ## BBIF_0064 integrase - Prom 859529 - 859588 3.3 + Prom 859450 - 859509 3.9 788 501 Tu 1 . + CDS 859539 - 860018 429 ## BBIF_0809 hypothetical protein + Term 860092 - 860147 3.5 789 502 Op 1 . - CDS 860100 - 860600 449 ## BBIF_0810 hypothetical protein 790 502 Op 2 . - CDS 860684 - 861061 491 ## BBIF_0811 hypothetical protein with MobA/MobL family domain 791 503 Op 1 23/0.000 + CDS 861187 - 861525 257 ## COG2963 Transposase and inactivated derivatives 792 503 Op 2 . + CDS 861660 - 862457 605 ## COG2801 Transposase and inactivated derivatives 793 504 Tu 1 . + CDS 862558 - 862776 246 ## BBIF_0814 hypothetical protein - Term 862920 - 862958 0.2 794 505 Tu 1 . - CDS 863047 - 863256 113 ## gi|224282893|ref|ZP_03646215.1| DNA binding domain, excisionase family protein 795 506 Tu 1 . + CDS 863290 - 863544 386 ## BBPR_0784 hypothetical protein 796 507 Tu 1 . - CDS 863633 - 864247 678 ## COG1335 Amidases related to nicotinamidase 797 508 Tu 1 . - CDS 864355 - 864636 317 ## BBPR_0786 hypothetical protein 798 509 Tu 1 . - CDS 864773 - 864955 111 ## + Prom 865086 - 865145 3.3 799 510 Op 1 . + CDS 865208 - 865735 271 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 800 510 Op 2 . + CDS 865758 - 866039 306 ## COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 801 510 Op 3 . + CDS 866078 - 866293 106 ## BBIF_0819 hypothetical protein 802 511 Op 1 7/0.000 - CDS 866389 - 867744 2031 ## COG2233 Xanthine/uracil permeases 803 511 Op 2 . - CDS 867795 - 868376 758 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins - Prom 868517 - 868576 5.8 + Prom 868447 - 868506 3.1 804 512 Op 1 . + CDS 868568 - 870571 2471 ## COG1835 Predicted acyltransferases 805 512 Op 2 . + CDS 870635 - 873292 2955 ## COG0210 Superfamily I DNA and RNA helicases + Prom 873380 - 873439 2.4 806 513 Op 1 . + CDS 873468 - 873866 508 ## BBPR_0793 hypothetical protein 807 513 Op 2 36/0.000 + CDS 873863 - 875077 1684 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 808 513 Op 3 . + CDS 875084 - 875899 243 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 809 513 Op 4 . + CDS 876103 - 876729 1042 ## PROTEIN SUPPORTED gi|224282905|ref|ZP_03646227.1| 30S ribosomal protein S4 + Term 876775 - 876824 16.4 - Term 876759 - 876814 19.3 810 514 Tu 1 . - CDS 876864 - 878849 2138 ## COG1835 Predicted acyltransferases 811 515 Tu 1 . - CDS 879294 - 879470 104 ## 812 516 Tu 1 . + CDS 879459 - 880133 850 ## COG0406 Fructose-2,6-bisphosphatase + Term 880170 - 880218 0.1 + Prom 880161 - 880220 1.7 813 517 Op 1 . + CDS 880254 - 880664 681 ## BBIF_0830 hypothetical protein 814 517 Op 2 . + CDS 880664 - 880903 365 ## BBPR_0800 hypothetical protein + Prom 880906 - 880965 3.6 815 518 Op 1 9/0.000 + CDS 881018 - 883696 3884 ## COG0013 Alanyl-tRNA synthetase 816 518 Op 2 4/0.008 + CDS 883705 - 884163 319 ## COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 817 518 Op 3 . + CDS 884175 - 885362 1698 ## COG1559 Predicted periplasmic solute-binding protein - Term 885264 - 885306 -1.0 818 519 Tu 1 . - CDS 885359 - 886024 580 ## BBIF_0835 conserved hypothetical membrane spanning protein 819 520 Op 1 7/0.000 + CDS 885876 - 887069 1297 ## COG0082 Chorismate synthase 820 520 Op 2 5/0.000 + CDS 887127 - 888749 1717 ## COG0337 3-dehydroquinate synthetase + Term 888753 - 888800 8.1 821 520 Op 3 . + CDS 888839 - 889282 684 ## COG0757 3-dehydroquinate dehydratase II 822 520 Op 4 . + CDS 889368 - 890147 992 ## BBPR_0808 hypothetical protein + Term 890167 - 890216 1.8 - Term 890070 - 890118 -0.5 823 521 Tu 1 . - CDS 890220 - 890942 614 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 824 522 Tu 1 . - CDS 891134 - 891562 137 ## BBPR_0810 sortase 825 523 Tu 1 . + CDS 891907 - 893574 2577 ## COG0504 CTP synthase (UTP-ammonia lyase) + Term 893604 - 893653 15.2 826 524 Op 1 12/0.000 + CDS 893796 - 895295 2169 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 827 524 Op 2 41/0.000 + CDS 895301 - 896530 1346 ## COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component 828 524 Op 3 4/0.008 + CDS 896533 - 897321 1378 ## COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component 829 525 Op 1 19/0.000 + CDS 897543 - 898814 1427 ## COG0520 Selenocysteine lyase + Term 898894 - 898927 3.9 + Prom 898828 - 898887 1.9 830 525 Op 2 4/0.008 + CDS 898970 - 899518 746 ## COG0822 NifU homolog involved in Fe-S cluster formation 831 525 Op 3 . + CDS 899597 - 900181 652 ## COG2151 Predicted metal-sulfur cluster biosynthetic enzyme - Term 900210 - 900281 22.6 832 526 Op 1 . - CDS 900287 - 901534 1839 ## COG0448 ADP-glucose pyrophosphorylase - Term 901613 - 901656 4.5 833 526 Op 2 . - CDS 901700 - 902578 891 ## COG0566 rRNA methylases - Prom 902805 - 902864 3.3 - TRNA 902693 - 902783 67.0 # Leu GAG 0 0 + Prom 902775 - 902834 2.1 834 527 Op 1 . + CDS 902889 - 903686 589 ## COG1385 Uncharacterized protein conserved in bacteria 835 527 Op 2 . + CDS 903760 - 904098 582 ## COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 836 527 Op 3 17/0.000 + CDS 904107 - 905192 1102 ## COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase 837 527 Op 4 13/0.000 + CDS 905189 - 905734 710 ## COG0319 Predicted metal-dependent hydrolase 838 527 Op 5 1/0.062 + CDS 905811 - 907229 1618 ## COG1253 Hemolysins and related proteins containing CBS domains 839 527 Op 6 . + CDS 907278 - 908288 1469 ## COG1159 GTPase + Term 908374 - 908407 -0.4 - Term 908310 - 908372 27.1 840 528 Tu 1 . - CDS 908389 - 910425 3032 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) - Prom 910458 - 910517 3.8 + Prom 910416 - 910475 1.9 841 529 Op 1 10/0.000 + CDS 910645 - 911784 1280 ## COG3288 NAD/NADP transhydrogenase alpha subunit 842 529 Op 2 17/0.000 + CDS 911788 - 912102 508 ## COG3288 NAD/NADP transhydrogenase alpha subunit 843 529 Op 3 . + CDS 912102 - 913547 2078 ## COG1282 NAD/NADP transhydrogenase beta subunit + Term 913703 - 913736 4.1 - Term 913576 - 913639 27.2 844 530 Tu 1 . - CDS 913687 - 914679 916 ## COG1073 Hydrolases of the alpha/beta superfamily + Prom 914787 - 914846 5.3 845 531 Tu 1 . + CDS 914994 - 915620 1031 ## PROTEIN SUPPORTED gi|224282940|ref|ZP_03646262.1| 50S ribosomal protein L25 + Term 915675 - 915714 1.7 + Prom 915658 - 915717 2.9 846 532 Tu 1 . + CDS 915836 - 916963 1806 ## COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase + Term 917007 - 917034 -0.8 847 533 Op 1 . + CDS 917166 - 917438 186 ## BBPR_0833 hypothetical protein 848 533 Op 2 . + CDS 917383 - 918123 619 ## BBMN68_671 kinase 849 534 Op 1 . + CDS 918251 - 918973 917 ## COG2860 Predicted membrane protein 850 534 Op 2 . + CDS 918927 - 919124 131 ## + Term 919125 - 919173 -1.0 - Term 919035 - 919079 11.0 851 535 Tu 1 . - CDS 919111 - 919371 407 ## PROTEIN SUPPORTED gi|224282945|ref|ZP_03646267.1| 30S ribosomal protein S20 + Prom 919347 - 919406 2.6 852 536 Op 1 4/0.008 + CDS 919580 - 921460 2989 ## COG0481 Membrane GTPase LepA 853 536 Op 2 . + CDS 921475 - 922869 1103 ## COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases 854 537 Op 1 . - CDS 922926 - 923066 137 ## BBIF_0869 hypothetical protein 855 537 Op 2 . - CDS 923070 - 923384 106 ## + Prom 923284 - 923343 3.6 856 538 Tu 1 . + CDS 923384 - 924952 2079 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 857 539 Tu 1 . + CDS 925149 - 927239 2314 ## COG0480 Translation elongation factors (GTPases) + Term 927240 - 927291 1.7 + Prom 927437 - 927496 5.3 858 540 Op 1 21/0.000 + CDS 927519 - 932090 6614 ## COG0069 Glutamate synthase domain 2 859 540 Op 2 . + CDS 932092 - 933624 1854 ## COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases + Term 933857 - 933890 -0.3 860 541 Tu 1 . + CDS 933972 - 934445 705 ## BBIF_0874 conserved hypothetical membrane spanning protein + Term 934504 - 934553 7.0 + Prom 934491 - 934550 1.6 861 542 Tu 1 . + CDS 934595 - 935845 1785 ## COG0438 Glycosyltransferase 862 543 Op 1 . + CDS 935997 - 936863 219 ## PROTEIN SUPPORTED gi|225088774|ref|YP_002660041.1| ribosomal protein S16 863 543 Op 2 . + CDS 936934 - 937824 574 ## COG0388 Predicted amidohydrolase 864 543 Op 3 . + CDS 937730 - 938557 552 ## BBIF_0878 hypothetical protein 865 544 Tu 1 . + CDS 938691 - 939641 1248 ## COG3049 Penicillin V acylase and related amidases 866 545 Op 1 . + CDS 939991 - 940728 574 ## Maqu_0555 hypothetical protein 867 545 Op 2 . + CDS 940746 - 941453 394 ## RER_28970 hypothetical protein 868 545 Op 3 . + CDS 941537 - 945193 3240 ## RER_28960 hypothetical protein 869 545 Op 4 . + CDS 945190 - 948777 1899 ## COG1002 Type II restriction enzyme, methylase subunits + Term 948827 - 948885 5.3 870 546 Tu 1 . - CDS 948917 - 949057 92 ## gi|224282963|ref|ZP_03646285.1| hypothetical protein BbifN4_03960 - Prom 949181 - 949240 3.2 871 547 Tu 1 . - CDS 949343 - 949537 182 ## - Prom 949565 - 949624 2.9 - Term 950274 - 950316 6.9 872 548 Op 1 . - CDS 950381 - 950575 65 ## 873 548 Op 2 . - CDS 950669 - 950860 293 ## gi|224282964|ref|ZP_03646286.1| hypothetical protein BbifN4_03965 - Prom 950887 - 950946 4.2 + Prom 951365 - 951424 4.4 874 549 Op 1 . + CDS 951665 - 952369 680 ## gi|313140121|ref|ZP_07802314.1| predicted protein 875 549 Op 2 . + CDS 952391 - 953917 1066 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 876 549 Op 3 . + CDS 953910 - 956555 1709 ## RER_28940 hypothetical protein 877 549 Op 4 . + CDS 956598 - 958805 1770 ## COG4930 Predicted ATP-dependent Lon-type protease + Term 959021 - 959073 3.2 878 550 Tu 1 . - CDS 959413 - 959688 205 ## - Prom 959708 - 959767 5.6 879 551 Tu 1 . + CDS 959991 - 960134 146 ## + Term 960376 - 960404 -1.0 880 552 Tu 1 . - CDS 960150 - 961127 530 ## COG4127 Uncharacterized conserved protein - Prom 961279 - 961338 2.4 881 553 Tu 1 . + CDS 961063 - 961272 161 ## + Prom 961279 - 961338 1.5 882 554 Op 1 . + CDS 961360 - 961557 355 ## BLJ_0940 phage protein 883 554 Op 2 . + CDS 961581 - 961751 63 ## + Term 961752 - 961802 9.5 884 555 Op 1 . - CDS 961819 - 962328 632 ## BBIF_0884 hypothetical protein 885 555 Op 2 . - CDS 962400 - 962678 299 ## BLJ_0942 hypothetical protein 886 555 Op 3 . - CDS 962742 - 963662 987 ## COG0657 Esterase/lipase 887 556 Tu 1 . + CDS 963903 - 965003 1459 ## COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferases 888 557 Tu 1 . + CDS 965123 - 965680 835 ## COG2062 Phosphohistidine phosphatase SixA + Term 965865 - 965890 -0.5 + Prom 965857 - 965916 1.7 889 558 Tu 1 . + CDS 965936 - 967156 1232 ## BBPR_0871 integrase/recombinase 890 559 Tu 1 . - CDS 967347 - 967610 65 ## 891 560 Tu 1 . + CDS 967539 - 967793 262 ## gi|313140133|ref|ZP_07802326.1| predicted protein + Term 967923 - 967981 2.5 - Term 967788 - 967835 5.4 892 561 Op 1 . - CDS 967843 - 968049 251 ## BBPR_0874 GP28 phagic protein 893 561 Op 2 . - CDS 968051 - 968206 143 ## gi|224282980|ref|ZP_03646302.1| hypothetical protein BbifN4_04045 894 561 Op 3 . - CDS 968255 - 968374 102 ## 895 561 Op 4 . - CDS 968449 - 968556 88 ## + Prom 968349 - 968408 3.1 896 562 Tu 1 . + CDS 968501 - 969418 1053 ## BBPR_0877 hypothetical protein + Term 969426 - 969470 9.1 - Term 969414 - 969457 8.1 897 563 Tu 1 . - CDS 969465 - 969827 400 ## BBPR_0878 hypothetical protein 898 564 Op 1 . - CDS 970033 - 970551 257 ## Bcell_2719 phage P1-related protein 899 564 Op 2 . - CDS 970548 - 971252 484 ## BBPR_0879 phagic protein 900 564 Op 3 . - CDS 971272 - 971664 335 ## BBPR_0880 hypothetical protein 901 564 Op 4 . - CDS 971645 - 971908 191 ## + Prom 971677 - 971736 3.5 902 565 Op 1 . + CDS 971805 - 972032 117 ## BBIF_0072 hypothetical protein with the helix-turn-helix motif 903 565 Op 2 . + CDS 972077 - 972682 67 ## 904 565 Op 3 . + CDS 972734 - 973516 791 ## COG3645 Uncharacterized phage-encoded protein + Term 973671 - 973702 0.0 905 566 Tu 1 . - CDS 973664 - 974119 277 ## BBPR_0884 hypothetical protein - Term 974341 - 974388 11.4 906 567 Tu 1 . - CDS 974401 - 974643 385 ## BBPR_0885 hypothetical protein 907 568 Op 1 . + CDS 974763 - 974996 307 ## BBPR_0886 hypothetical protein 908 568 Op 2 . + CDS 975025 - 975240 119 ## BBPR_0887 hypothetical protein 909 568 Op 3 . + CDS 975237 - 975476 444 ## BBPR_0888 hypothetical protein + Term 975636 - 975684 0.4 + Prom 975659 - 975718 1.6 910 569 Op 1 . + CDS 975751 - 976095 405 ## BBPR_0889 hypothetical protein 911 569 Op 2 . + CDS 976095 - 976625 468 ## COG0629 Single-stranded DNA-binding protein 912 569 Op 3 . + CDS 976644 - 978041 1596 ## COG1475 Predicted transcriptional regulators 913 569 Op 4 . + CDS 978038 - 978979 699 ## BBPR_0892 cryptic prophage protein 914 569 Op 5 . + CDS 978976 - 979167 196 ## BBPR_0893 hypothetical protein 915 569 Op 6 . + CDS 979164 - 979568 394 ## BBPR_0894 GP77 phage protein 916 569 Op 7 . + CDS 979565 - 980143 775 ## BBPR_0895 oligoribonuclease Orn 917 569 Op 8 . + CDS 980143 - 980421 322 ## BBPR_0896 hypothetical protein 918 569 Op 9 . + CDS 980418 - 980723 212 ## BBPR_0897 hypothetical protein 919 569 Op 10 . + CDS 980726 - 980923 255 ## BBPR_0898 hypothetical protein 920 569 Op 11 . + CDS 980977 - 981726 607 ## BBPR_0899 hypothetical protein 921 569 Op 12 . + CDS 981753 - 981956 256 ## COG1724 Predicted periplasmic or secreted lipoprotein 922 569 Op 13 . + CDS 981953 - 982363 578 ## BBPR_0901 phage protein 923 569 Op 14 . + CDS 982365 - 982532 189 ## BBPR_0902 transcriptional regulator - Term 982410 - 982445 0.0 924 570 Op 1 . - CDS 982685 - 982888 242 ## BBPR_0295 hypothetical protein 925 570 Op 2 . - CDS 982878 - 983036 143 ## 926 570 Op 3 . - CDS 983101 - 983229 195 ## - Prom 983250 - 983309 5.9 + Prom 983219 - 983278 3.0 927 571 Tu 1 . + CDS 983339 - 983707 305 ## BBPR_0906 gp4 928 572 Op 1 . + CDS 983912 - 984580 563 ## BBPR_0907 GP60 929 572 Op 2 . + CDS 984600 - 984989 447 ## BBPR_0908 GP25 930 572 Op 3 . + CDS 984989 - 986791 2307 ## BBPR_0909 phage terminase protein large subunit TerL 931 572 Op 4 . + CDS 986785 - 988191 2118 ## BBPR_0910 putative portal gp5 932 572 Op 5 . + CDS 988175 - 989389 1081 ## BBPR_0911 gp4 phagic protein 933 572 Op 6 . + CDS 989386 - 989646 372 ## BBPR_0912 hypothetical protein + Term 989672 - 989704 3.0 + Prom 989775 - 989834 2.9 934 573 Op 1 . + CDS 989983 - 990537 778 ## BBPR_0913 hypothetical protein 935 573 Op 2 . + CDS 990567 - 991523 1638 ## BBPR_0914 major capsid subunit gp9 936 573 Op 3 . + CDS 991523 - 991957 494 ## BBPR_0915 hypothetical protein 937 573 Op 4 . + CDS 991971 - 992468 733 ## BBPR_0916 hypothetical protein 938 573 Op 5 . + CDS 992465 - 992899 369 ## BBPR_0917 putative phage associated protein 939 573 Op 6 . + CDS 992889 - 993317 454 ## BBPR_0918 hypothetical protein 940 573 Op 7 . + CDS 993314 - 993724 540 ## BBPR_0919 transcriptional regulator 941 573 Op 8 . + CDS 993798 - 994340 801 ## BBPR_0920 GP28 + Term 994355 - 994381 -0.6 942 573 Op 9 . + CDS 994435 - 994941 681 ## BBPR_0921 putative DNAase primase 943 573 Op 10 . + CDS 995004 - 995300 291 ## BBPR_0922 phage terminase protein large subunit-like protein 944 573 Op 11 . + CDS 995311 - 998445 4006 ## COG5283 Phage-related tail protein 945 573 Op 12 . + CDS 998442 - 999221 875 ## BBPR_0924 hypothetical protein 946 573 Op 13 . + CDS 999223 - 1001085 2619 ## BBPR_0925 gp4 phage minor structural protein 947 573 Op 14 . + CDS 1001096 - 1001497 511 ## BBPR_0926 major factor subunit 948 573 Op 15 . + CDS 1001494 - 1003326 2606 ## BBPR_0927 tail fiber protein 949 574 Op 1 . + CDS 1003440 - 1004201 525 ## BBPR_0928 tail type measure protein 950 574 Op 2 . + CDS 1004194 - 1004601 269 ## BBPR_0929 phage minor structural protein + Term 1004789 - 1004818 1.2 951 575 Op 1 . + CDS 1004829 - 1005254 660 ## BBPR_0930 phagic holin Spp1 family protein 952 575 Op 2 . + CDS 1005238 - 1006071 814 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 1006073 - 1006133 15.0 - Term 1006062 - 1006117 18.7 953 576 Op 1 . - CDS 1006130 - 1006324 264 ## BBPR_0932 hypothetical protein 954 576 Op 2 . - CDS 1006321 - 1006464 124 ## gi|224283039|ref|ZP_03646361.1| hypothetical protein BbifN4_04340 955 577 Tu 1 . - CDS 1006681 - 1007013 75 ## + Prom 1006921 - 1006980 2.5 956 578 Op 1 9/0.000 + CDS 1007172 - 1009478 3600 ## COG0620 Methionine synthase II (cobalamin-independent) 957 578 Op 2 . + CDS 1009621 - 1010469 1401 ## COG0685 5,10-methylenetetrahydrofolate reductase - Term 1010536 - 1010572 0.7 958 579 Tu 1 . - CDS 1010582 - 1010914 357 ## BBPR_0935 hypothetical protein - Prom 1010979 - 1011038 3.2 959 580 Tu 1 . + CDS 1010996 - 1014094 4059 ## COG1391 Glutamine synthetase adenylyltransferase + Term 1014148 - 1014183 0.4 + Prom 1014096 - 1014155 2.2 960 581 Op 1 19/0.000 + CDS 1014234 - 1015196 1277 ## COG0540 Aspartate carbamoyltransferase, catalytic chain 961 581 Op 2 . + CDS 1015196 - 1015615 648 ## COG1781 Aspartate carbamoyltransferase, regulatory subunit 962 582 Op 1 . + CDS 1015724 - 1017148 1872 ## COG0044 Dihydroorotase and related cyclic amidohydrolases 963 582 Op 2 1/0.062 + CDS 1017219 - 1018184 1238 ## COG0284 Orotidine-5'-phosphate decarboxylase + Term 1018247 - 1018280 0.1 964 583 Op 1 13/0.000 + CDS 1018303 - 1019133 770 ## COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 965 583 Op 2 1/0.062 + CDS 1019136 - 1020083 1244 ## COG0167 Dihydroorotate dehydrogenase 966 583 Op 3 . + CDS 1020105 - 1020803 966 ## COG0461 Orotate phosphoribosyltransferase + Term 1020819 - 1020865 11.6 + Prom 1020828 - 1020887 3.3 967 584 Op 1 . + CDS 1020912 - 1021097 120 ## BBPR_0944 MerR family transcriptional regulator 968 584 Op 2 . + CDS 1021167 - 1022210 1242 ## COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases + Term 1022288 - 1022341 19.3 - Term 1022276 - 1022329 18.5 969 585 Tu 1 . - CDS 1022400 - 1023551 1333 ## BBIF_0902 conserved hypothetical membrane spanning protein 970 586 Op 1 . + CDS 1023672 - 1023824 107 ## gi|313140207|ref|ZP_07802400.1| predicted protein 971 586 Op 2 . + CDS 1023821 - 1024000 184 ## gi|224283055|ref|ZP_03646377.1| hypothetical protein BbifN4_04420 972 587 Tu 1 . + CDS 1024154 - 1024465 418 ## gi|313140208|ref|ZP_07802401.1| predicted protein + Prom 1024663 - 1024722 2.8 973 588 Tu 1 . + CDS 1024766 - 1027273 2683 ## COG0178 Excinuclease ATPase subunit 974 589 Tu 1 . + CDS 1027401 - 1028705 1404 ## COG0534 Na+-driven multidrug efflux pump 975 590 Op 1 . + CDS 1028864 - 1029574 1039 ## COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 976 590 Op 2 . + CDS 1029577 - 1030293 773 ## COG2231 Uncharacterized protein related to Endonuclease III 977 590 Op 3 . + CDS 1030340 - 1030864 736 ## COG1695 Predicted transcriptional regulators 978 590 Op 4 . + CDS 1030871 - 1031866 1234 ## COG0679 Predicted permeases 979 591 Tu 1 . - CDS 1031892 - 1032260 389 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 980 592 Op 1 8/0.000 - CDS 1032365 - 1033510 706 ## COG3550 Uncharacterized protein related to capsule biosynthesis enzymes 981 592 Op 2 . - CDS 1033507 - 1033806 250 ## COG1396 Predicted transcriptional regulators - Prom 1033826 - 1033885 3.3 982 593 Op 1 . + CDS 1033828 - 1034106 313 ## COG4106 Trans-aconitate methyltransferase 983 593 Op 2 . + CDS 1034112 - 1034309 169 ## BBIF_0915 hypothetical protein + Term 1034343 - 1034368 -0.5 984 594 Tu 1 . + CDS 1034410 - 1034985 679 ## COG3226 Uncharacterized protein conserved in bacteria + Prom 1035004 - 1035063 3.2 985 595 Tu 1 . + CDS 1035122 - 1035622 616 ## BBIF_0917 hypothetical protein + Term 1035692 - 1035732 -0.3 - Term 1035629 - 1035666 8.0 986 596 Tu 1 . - CDS 1035676 - 1036599 1566 ## COG0583 Transcriptional regulator 987 597 Tu 1 . - CDS 1036816 - 1037445 951 ## COG1011 Predicted hydrolase (HAD superfamily) 988 598 Tu 1 . - CDS 1037606 - 1039402 1775 ## COG0063 Predicted sugar kinase 989 599 Tu 1 . + CDS 1039705 - 1040466 912 ## COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 990 600 Tu 1 . - CDS 1040510 - 1041001 552 ## COG0656 Aldo/keto reductases, related to diketogulonate reductase 991 601 Tu 1 . - CDS 1041189 - 1041389 64 ## - Prom 1041575 - 1041634 3.5 - TRNA 1041479 - 1041555 83.1 # Pro GGG 0 0 + Prom 1041427 - 1041486 2.1 992 602 Op 1 . + CDS 1041592 - 1041789 175 ## 993 602 Op 2 . + CDS 1041826 - 1043292 1891 ## COG4284 UDP-glucose pyrophosphorylase + Term 1043361 - 1043409 1.0 994 603 Op 1 . + CDS 1043430 - 1045367 2136 ## BBPR_0977 hypothetical protein 995 603 Op 2 . + CDS 1045372 - 1045698 266 ## BBPR_0978 hypothetical protein 996 604 Tu 1 . + CDS 1045807 - 1048365 2684 ## COG4581 Superfamily II RNA helicase + Term 1048395 - 1048435 -0.4 997 605 Op 1 . + CDS 1048489 - 1048836 528 ## BBIF_0928 hypothetical protein 998 605 Op 2 . + CDS 1048847 - 1049581 754 ## COG0546 Predicted phosphatases + Term 1049754 - 1049806 4.4 - Term 1049501 - 1049551 -0.7 999 606 Tu 1 . - CDS 1049613 - 1050149 218 ## BBPR_0983 hypothetical protein - Prom 1050351 - 1050410 80.3 1000 607 Tu 1 . - CDS 1052812 - 1052898 70 ## 1001 608 Tu 1 . + CDS 1053020 - 1053256 98 ## gi|224283082|ref|ZP_03646404.1| hypothetical protein BbifN4_04559 + Prom 1053294 - 1053353 2.1 1002 609 Op 1 . + CDS 1053406 - 1053891 342 ## BBIF_0931 hypothetical protein with helix-turn-helix motif 1003 609 Op 2 . + CDS 1053895 - 1054545 826 ## COG4832 Uncharacterized conserved protein + Term 1054689 - 1054722 1.1 - Term 1054462 - 1054499 1.1 1004 610 Tu 1 . - CDS 1054570 - 1054845 273 ## BBMN68_435 phage integrase family protein 1005 611 Tu 1 . - CDS 1055000 - 1055329 169 ## BBIF_0934 hypothetical protein 1006 612 Tu 1 . + CDS 1055163 - 1055453 284 ## BBPR_0988 hypothetical protein 1007 613 Op 1 . - CDS 1055504 - 1055881 455 ## BBIF_0935 hypothetical protein 1008 613 Op 2 4/0.008 - CDS 1055896 - 1056570 727 ## COG0789 Predicted transcriptional regulators 1009 613 Op 3 . - CDS 1056665 - 1057102 484 ## COG1716 FOG: FHA domain 1010 613 Op 4 5/0.000 - CDS 1057108 - 1057929 954 ## COG3879 Uncharacterized protein conserved in bacteria 1011 613 Op 5 5/0.000 - CDS 1057936 - 1058268 547 ## COG3856 Uncharacterized conserved protein (small basic protein) 1012 613 Op 6 2/0.023 - CDS 1058269 - 1059240 1193 ## COG3879 Uncharacterized protein conserved in bacteria 1013 613 Op 7 . - CDS 1059230 - 1059883 703 ## COG0558 Phosphatidylglycerophosphate synthase 1014 613 Op 8 3/0.016 - CDS 1059900 - 1060751 1229 ## COG0040 ATP phosphoribosyltransferase 1015 613 Op 9 . - CDS 1060786 - 1061049 568 ## COG0140 Phosphoribosyl-ATP pyrophosphohydrolase 1016 614 Tu 1 . - CDS 1061161 - 1061826 902 ## COG0036 Pentose-5-phosphate-3-epimerase 1017 615 Tu 1 . - CDS 1061954 - 1062946 1233 ## COG0682 Prolipoprotein diacylglyceryltransferase 1018 616 Tu 1 . + CDS 1062864 - 1063052 145 ## 1019 617 Op 1 37/0.000 - CDS 1063044 - 1063916 367 ## PROTEIN SUPPORTED gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc 1020 617 Op 2 . - CDS 1063949 - 1066036 2515 ## COG0133 Tryptophan synthase beta chain - Term 1066154 - 1066198 15.4 1021 618 Op 1 . - CDS 1066235 - 1068370 2710 ## COG1160 Predicted GTPases 1022 618 Op 2 . - CDS 1068367 - 1069143 953 ## COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases - Prom 1069214 - 1069273 3.5 1023 619 Op 1 . + CDS 1069131 - 1069313 89 ## 1024 619 Op 2 . + CDS 1069310 - 1070215 1062 ## COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) - Term 1070085 - 1070140 6.4 1025 620 Op 1 . - CDS 1070195 - 1070488 292 ## BBIF_0951 hypothetical protein 1026 620 Op 2 . - CDS 1070581 - 1072212 2427 ## COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) 1027 620 Op 3 . - CDS 1072160 - 1073521 1115 ## BBPR_1007 hypothetical protein 1028 620 Op 4 39/0.000 - CDS 1073518 - 1074444 1184 ## COG0074 Succinyl-CoA synthetase, alpha subunit 1029 620 Op 5 . - CDS 1074441 - 1075646 1568 ## COG0045 Succinyl-CoA synthetase, beta subunit 1030 620 Op 6 . - CDS 1075731 - 1076312 744 ## COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 1031 620 Op 7 . - CDS 1076330 - 1076755 525 ## BBPR_1011 YajC protein translocase subunit 1032 620 Op 8 29/0.000 - CDS 1076816 - 1077901 1193 ## COG2255 Holliday junction resolvasome, helicase subunit 1033 620 Op 9 14/0.000 - CDS 1077908 - 1078525 656 ## COG0632 Holliday junction resolvasome, DNA-binding subunit - Term 1078587 - 1078624 -0.6 1034 620 Op 10 8/0.000 - CDS 1078701 - 1079282 583 ## COG0817 Holliday junction resolvasome, endonuclease subunit 1035 620 Op 11 . - CDS 1079289 - 1080047 1214 ## COG0217 Uncharacterized conserved protein - Prom 1080080 - 1080139 2.3 - Term 1080083 - 1080149 11.7 1036 621 Tu 1 . - CDS 1080326 - 1083508 3595 ## COG3525 N-acetyl-beta-hexosaminidase - Prom 1083601 - 1083660 4.2 - Term 1083668 - 1083717 8.2 1037 622 Tu 1 . - CDS 1083749 - 1085779 3263 ## COG0441 Threonyl-tRNA synthetase - Term 1085860 - 1085913 -0.4 1038 623 Op 1 . - CDS 1085991 - 1087619 1831 ## COG1301 Na+/H+-dicarboxylate symporters 1039 623 Op 2 . - CDS 1087653 - 1087871 78 ## - Prom 1087996 - 1088055 2.5 - TRNA 1087811 - 1087886 84.4 # Gly GCC 0 0 - TRNA 1087910 - 1087985 80.8 # Val CAC 0 0 + Prom 1088059 - 1088118 1.6 1040 624 Tu 1 . + CDS 1088139 - 1089704 1653 ## BBIF_0966 hypothetical protein - TRNA 1090025 - 1090099 82.7 # Val GAC 0 0 - TRNA 1090153 - 1090223 54.7 # Cys GCA 0 0 - TRNA 1090250 - 1090325 76.7 # Gly GCC 0 0 1041 625 Tu 1 . + CDS 1090383 - 1091351 729 ## BBIF_0967 hypothetical protein - Term 1091371 - 1091418 12.4 1042 626 Tu 1 . - CDS 1091473 - 1092417 1493 ## COG1968 Uncharacterized bacitracin resistance protein - Prom 1092545 - 1092604 2.4 1043 627 Tu 1 . + CDS 1092556 - 1093347 1125 ## COG3001 Fructosamine-3-kinase + Term 1093383 - 1093424 9.6 - Term 1093371 - 1093412 9.6 1044 628 Op 1 3/0.016 - CDS 1093483 - 1094634 1060 ## COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain 1045 628 Op 2 . - CDS 1094687 - 1095943 1156 ## COG1420 Transcriptional regulator of heat shock gene 1046 629 Tu 1 . - CDS 1096127 - 1096288 58 ## 1047 630 Op 1 13/0.000 + CDS 1096291 - 1098399 3041 ## COG0021 Transketolase 1048 630 Op 2 . + CDS 1098532 - 1099635 1872 ## COG0176 Transaldolase + Term 1099779 - 1099816 6.5 + Prom 1099742 - 1099801 2.4 1049 631 Tu 1 . + CDS 1099877 - 1100689 1007 ## COG3619 Predicted membrane protein 1050 632 Tu 1 . + CDS 1100854 - 1102266 1176 ## COG1114 Branched-chain amino acid permeases + Prom 1102354 - 1102413 3.5 1051 633 Tu 1 . + CDS 1102493 - 1102948 148 ## gi|313140279|ref|ZP_07802472.1| predicted protein 1052 634 Op 1 1/0.062 - CDS 1103134 - 1104504 1569 ## COG0534 Na+-driven multidrug efflux pump 1053 634 Op 2 . - CDS 1104501 - 1105337 1042 ## COG0561 Predicted hydrolases of the HAD superfamily 1054 634 Op 3 . - CDS 1105390 - 1106340 1120 ## COG0039 Malate/lactate dehydrogenases - Term 1106375 - 1106414 8.4 1055 635 Op 1 9/0.000 - CDS 1106448 - 1106696 437 ## COG1314 Preprotein translocase subunit SecG 1056 635 Op 2 13/0.000 - CDS 1106775 - 1107569 841 ## COG0149 Triosephosphate isomerase 1057 635 Op 3 . - CDS 1107638 - 1108843 1904 ## COG0126 3-phosphoglycerate kinase - Prom 1108891 - 1108950 2.1 - Term 1108911 - 1108953 10.0 1058 636 Tu 1 . - CDS 1109001 - 1109972 958 ## COG1481 Uncharacterized protein conserved in bacteria - Prom 1110070 - 1110129 3.4 1059 637 Op 1 . - CDS 1110139 - 1111083 1002 ## COG1660 Predicted P-loop-containing kinase 1060 637 Op 2 . - CDS 1111083 - 1112045 1157 ## COG0169 Shikimate 5-dehydrogenase - Prom 1112078 - 1112137 3.0 1061 638 Op 1 1/0.062 - CDS 1112239 - 1114581 1977 ## COG0322 Nuclease subunit of the excinuclease complex 1062 638 Op 2 . - CDS 1114578 - 1117568 3360 ## COG0178 Excinuclease ATPase subunit - Prom 1117611 - 1117670 2.2 - Term 1117756 - 1117800 4.1 1063 639 Tu 1 . - CDS 1117815 - 1118456 1003 ## BBIF_0988 hypothetical protein - Prom 1118489 - 1118548 2.3 1064 640 Op 1 . - CDS 1118614 - 1118913 353 ## BBIF_0989 hypothetical protein 1065 640 Op 2 . - CDS 1118920 - 1119057 66 ## BBIF_0990 hypothetical protein - Prom 1119295 - 1119354 1.9 + Prom 1119183 - 1119242 2.2 1066 641 Op 1 40/0.000 + CDS 1119354 - 1120019 1009 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 1067 641 Op 2 . + CDS 1120016 - 1121455 1507 ## COG0642 Signal transduction histidine kinase 1068 642 Tu 1 . - CDS 1121484 - 1122233 674 ## COG1876 D-alanyl-D-alanine carboxypeptidase - Prom 1122274 - 1122333 1.6 + Prom 1122359 - 1122418 1.7 1069 643 Tu 1 . + CDS 1122465 - 1124066 2184 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains + Term 1124096 - 1124125 2.1 - Term 1124434 - 1124468 4.3 1070 644 Op 1 4/0.008 - CDS 1124477 - 1125499 1604 ## COG1087 UDP-glucose 4-epimerase 1071 644 Op 2 . - CDS 1125545 - 1127059 2127 ## COG4468 Galactose-1-phosphate uridyltransferase 1072 644 Op 3 . - CDS 1127059 - 1128147 1607 ## BBIF_0997 mucin desulfatase - Prom 1128270 - 1128329 3.4 + Prom 1128270 - 1128329 6.5 1073 645 Tu 1 . + CDS 1128437 - 1129591 1141 ## COG1940 Transcriptional regulator/sugar kinase + Term 1129620 - 1129674 21.4 - Term 1129611 - 1129659 17.6 1074 646 Op 1 . - CDS 1129734 - 1130675 314 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 - Term 1130721 - 1130766 14.4 1075 646 Op 2 . - CDS 1130904 - 1132343 2049 ## BBIF_1000 lacto_N-biose phorylase - Term 1132415 - 1132481 30.0 1076 647 Op 1 . - CDS 1132719 - 1133159 547 ## BBPR_1055 lacto-N-biose phorylase 1077 647 Op 2 38/0.000 - CDS 1133411 - 1134361 1242 ## COG0395 ABC-type sugar transport system, permease component 1078 647 Op 3 35/0.000 - CDS 1134361 - 1135332 1174 ## COG1175 ABC-type sugar transport systems, permease components - Term 1135389 - 1135423 5.0 1079 647 Op 4 . - CDS 1135509 - 1136816 2040 ## COG1653 ABC-type sugar transport system, periplasmic component 1080 647 Op 5 . - CDS 1136904 - 1136981 66 ## - Prom 1137001 - 1137060 5.5 - Term 1137232 - 1137277 15.7 1081 648 Op 1 . - CDS 1137309 - 1138922 1658 ## COG0147 Anthranilate/para-aminobenzoate synthases component I 1082 648 Op 2 24/0.000 - CDS 1138922 - 1139347 542 ## COG0139 Phosphoribosyl-AMP cyclohydrolase 1083 648 Op 3 . - CDS 1139420 - 1140193 1047 ## COG0107 Imidazoleglycerol-phosphate synthase 1084 649 Op 1 2/0.023 - CDS 1140343 - 1141533 1426 ## COG0820 Predicted Fe-S-cluster redox enzyme 1085 649 Op 2 7/0.000 - CDS 1141604 - 1142590 1436 ## COG0575 CDP-diglyceride synthetase 1086 649 Op 3 33/0.000 - CDS 1142707 - 1143261 948 ## COG0233 Ribosome recycling factor 1087 649 Op 4 . - CDS 1143342 - 1144088 1042 ## COG0528 Uridylate kinase 1088 650 Tu 1 . - CDS 1144201 - 1144881 665 ## BBIF_1011 hypothetical protein 1089 651 Tu 1 . + CDS 1144766 - 1144981 167 ## gi|224283167|ref|ZP_03646489.1| hypothetical protein BbifN4_04994 - Term 1144954 - 1144995 4.5 1090 652 Op 1 38/0.000 - CDS 1145084 - 1145935 421 ## PROTEIN SUPPORTED gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts - Term 1145948 - 1146005 10.0 1091 652 Op 2 . - CDS 1146012 - 1146836 1375 ## PROTEIN SUPPORTED gi|224283169|ref|ZP_03646491.1| 30S ribosomal protein S2 1092 653 Op 1 . - CDS 1147037 - 1147525 585 ## COG0242 N-formylmethionyl-tRNA deformylase 1093 653 Op 2 . - CDS 1147526 - 1149550 2610 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 1094 654 Tu 1 . + CDS 1149567 - 1149695 64 ## - Term 1149553 - 1149594 11.8 1095 655 Op 1 . - CDS 1149626 - 1150120 351 ## BBIF_1016 hypothetical protein - Prom 1150169 - 1150228 1.9 - Term 1150180 - 1150218 7.4 1096 655 Op 2 . - CDS 1150276 - 1151397 1318 ## COG0516 IMP dehydrogenase/GMP reductase 1097 656 Tu 1 . + CDS 1151557 - 1152777 2044 ## COG0538 Isocitrate dehydrogenases + Term 1152847 - 1152892 5.9 + Prom 1152853 - 1152912 2.0 1098 657 Tu 1 . + CDS 1152945 - 1154558 1705 ## BBPR_1074 hypothetical protein + Term 1154745 - 1154792 2.0 1099 658 Tu 1 . - CDS 1154705 - 1156519 2021 ## COG1022 Long-chain acyl-CoA synthetases (AMP-forming) 1100 659 Tu 1 . - CDS 1156630 - 1157319 286 ## COG0739 Membrane proteins related to metalloendopeptidases + TRNA 1157707 - 1157782 90.2 # Asn GTT 0 0 1101 660 Op 1 9/0.000 - CDS 1158267 - 1159337 664 ## PROTEIN SUPPORTED gi|227411248|ref|ZP_03894449.1| (SSU ribosomal protein S18P)-alanine acetyltransferase 1102 660 Op 2 . - CDS 1159307 - 1159888 553 ## COG0456 Acetyltransferases 1103 660 Op 3 . - CDS 1159888 - 1160754 808 ## BBPR_1080 glycoprotease protein family (EC:3.4.24.57) 1104 660 Op 4 . - CDS 1160814 - 1161467 604 ## COG0802 Predicted ATPase or kinase 1105 661 Op 1 10/0.000 - CDS 1161579 - 1162556 1160 ## COG1466 DNA polymerase III, delta subunit 1106 661 Op 2 7/0.000 - CDS 1162504 - 1164417 839 ## COG0658 Predicted membrane metal-binding protein 1107 661 Op 3 . - CDS 1164597 - 1165313 418 ## COG1555 DNA uptake protein and related DNA-binding proteins 1108 662 Tu 1 . + CDS 1165290 - 1165481 93 ## - Term 1165478 - 1165522 5.1 1109 663 Tu 1 . - CDS 1165598 - 1168576 4642 ## COG0495 Leucyl-tRNA synthetase 1110 664 Op 1 . - CDS 1168701 - 1169630 995 ## COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 1111 664 Op 2 . - CDS 1169641 - 1170582 1325 ## COG0598 Mg2+ and Co2+ transporters - Prom 1170672 - 1170731 3.0 1112 665 Tu 1 . - CDS 1170736 - 1171572 855 ## COG0406 Fructose-2,6-bisphosphatase 1113 666 Op 1 . - CDS 1171693 - 1173267 2092 ## COG2939 Carboxypeptidase C (cathepsin A) 1114 666 Op 2 . - CDS 1173360 - 1176944 4190 ## COG4913 Uncharacterized protein conserved in bacteria 1115 666 Op 3 . - CDS 1176947 - 1177969 1345 ## BBIF_1035 hypothetical protein 1116 666 Op 4 . - CDS 1177971 - 1179491 1406 ## BBPR_1092 hypothetical protein 1117 667 Op 1 . - CDS 1179630 - 1180481 943 ## COG0648 Endonuclease IV 1118 667 Op 2 . - CDS 1180553 - 1180921 445 ## COG3189 Uncharacterized conserved protein 1119 668 Op 1 . + CDS 1180968 - 1181723 308 ## PROTEIN SUPPORTED gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase 1120 668 Op 2 . + CDS 1181787 - 1182275 514 ## BBIF_1040 acetyltransferase (GNAT) family 1121 669 Tu 1 . - CDS 1182265 - 1182603 209 ## BBPR_1097 putative transcriptional regulator - Prom 1182803 - 1182862 1.8 - Term 1182988 - 1183034 11.1 1122 670 Op 1 . - CDS 1183134 - 1183379 391 ## COG1051 ADP-ribose pyrophosphatase 1123 670 Op 2 . - CDS 1183479 - 1183700 274 ## BBPR_1099 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1124 671 Op 1 . - CDS 1184035 - 1184220 164 ## gi|224283201|ref|ZP_03646523.1| hypothetical protein BbifN4_05164 1125 671 Op 2 . - CDS 1184204 - 1185166 535 ## COG4405 Uncharacterized protein conserved in bacteria 1126 672 Tu 1 . + CDS 1185212 - 1185742 -158 ## BBPR_1103 putative integral membrane sensor signal transduction histidine kinase 1127 673 Tu 1 . + CDS 1185847 - 1186542 599 ## COG2135 Uncharacterized conserved protein 1128 674 Tu 1 . - CDS 1186511 - 1186804 160 ## 1129 675 Tu 1 . + CDS 1186943 - 1187482 532 ## BBIF_1046 hypothetical protein - Term 1187464 - 1187497 0.9 1130 676 Tu 1 . - CDS 1187557 - 1188024 408 ## COG0346 Lactoylglutathione lyase and related lyases 1131 677 Tu 1 . + CDS 1188440 - 1189402 1076 ## BBIF_1048 Co/Zn/Cd efflux system component 1132 678 Tu 1 . - CDS 1189746 - 1190567 372 ## COG0477 Permeases of the major facilitator superfamily 1133 679 Op 1 . + CDS 1190585 - 1191061 172 ## BBPR_1111 hypothetical protein 1134 679 Op 2 . + CDS 1191064 - 1191939 1047 ## BBIF_1050 conserved hypothetical membrane spanning protein 1135 680 Tu 1 . + CDS 1192109 - 1192729 394 ## BBIF_1052 hypothetical protein of unknown function (DUF1113) 1136 681 Op 1 . - CDS 1192705 - 1193307 812 ## COG2249 Putative NADPH-quinone reductase (modulator of drug activity B) 1137 681 Op 2 . - CDS 1193354 - 1194373 1066 ## COG4767 Glycopeptide antibiotics resistance protein 1138 682 Tu 1 . + CDS 1194663 - 1195484 1059 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain + Term 1195574 - 1195620 18.1 - Term 1195553 - 1195617 31.7 1139 683 Op 1 . - CDS 1195664 - 1196068 756 ## COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase 1140 683 Op 2 . - CDS 1196196 - 1197056 791 ## COG3738 Uncharacterized protein conserved in bacteria 1141 683 Op 3 . - CDS 1197053 - 1197487 117 ## + Prom 1197007 - 1197066 2.0 1142 684 Tu 1 . + CDS 1197308 - 1198003 830 ## COG0778 Nitroreductase + Term 1198039 - 1198088 1.0 1143 685 Tu 1 . + CDS 1198140 - 1199372 1146 ## BBPR_1120 hypothetical protein + TRNA 1199563 - 1199635 80.6 # Ala GGC 0 0 + Prom 1199560 - 1199619 75.8 1144 686 Tu 1 . + CDS 1199640 - 1199879 86 ## - Term 1199909 - 1199954 0.2 1145 687 Op 1 . - CDS 1199955 - 1201217 1322 ## COG0366 Glycosidases 1146 687 Op 2 . - CDS 1201278 - 1201721 690 ## BBIF_1061 transmembrane protein 1147 688 Op 1 6/0.000 - CDS 1201858 - 1202595 672 ## COG0406 Fructose-2,6-bisphosphatase 1148 688 Op 2 . - CDS 1202573 - 1203010 495 ## COG0799 Uncharacterized homolog of plant Iojap protein 1149 688 Op 3 11/0.000 - CDS 1203015 - 1204349 1755 ## COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) - Prom 1204523 - 1204582 2.8 - TRNA 1204475 - 1204545 50.4 # Gln TTG 0 0 1150 688 Op 4 . - CDS 1204607 - 1205629 1388 ## COG0462 Phosphoribosylpyrophosphate synthetase - Prom 1205662 - 1205721 2.1 - Term 1205664 - 1205706 0.8 1151 689 Op 1 . - CDS 1205764 - 1206426 832 ## COG1057 Nicotinic acid mononucleotide adenylyltransferase 1152 689 Op 2 . - CDS 1206519 - 1207070 793 ## BBIF_1067 hypothetical protein 1153 689 Op 3 . - CDS 1207067 - 1208365 1648 ## COG0014 Gamma-glutamyl phosphate reductase 1154 689 Op 4 . - CDS 1208419 - 1208592 90 ## + Prom 1208365 - 1208424 2.7 1155 690 Tu 1 . + CDS 1208561 - 1210048 2254 ## COG0498 Threonine synthase - Term 1210019 - 1210052 -0.6 1156 691 Op 1 . - CDS 1210082 - 1210792 576 ## BBPR_1131 hypothetical protein 1157 691 Op 2 . - CDS 1210794 - 1211534 686 ## BBPR_1132 hypothetical protein 1158 691 Op 3 8/0.000 - CDS 1211518 - 1212477 1427 ## COG1131 ABC-type multidrug transport system, ATPase component 1159 691 Op 4 . - CDS 1212573 - 1212947 606 ## COG1725 Predicted transcriptional regulators - Prom 1213000 - 1213059 6.7 1160 692 Op 1 . - CDS 1213068 - 1213727 856 ## COG0637 Predicted phosphatase/phosphohexomutase 1161 692 Op 2 17/0.000 - CDS 1213788 - 1215554 1669 ## COG0497 ATPase involved in DNA repair 1162 692 Op 3 . - CDS 1215547 - 1216521 842 ## COG0061 Predicted sugar kinase 1163 692 Op 4 . - CDS 1216559 - 1216783 118 ## gi|224283239|ref|ZP_03646561.1| hypothetical protein BbifN4_05354 1164 693 Op 1 17/0.000 + CDS 1216782 - 1218245 1926 ## COG0168 Trk-type K+ transport systems, membrane components + Prom 1218272 - 1218331 1.8 1165 693 Op 2 . + CDS 1218426 - 1219079 972 ## COG0569 K+ transport systems, NAD-binding component + Prom 1219112 - 1219171 2.5 1166 694 Tu 1 . + CDS 1219227 - 1219901 516 ## BBIF_1079 hypothetical protein - Term 1219694 - 1219725 0.0 1167 695 Op 1 . - CDS 1219937 - 1220695 767 ## COG1189 Predicted rRNA methylase 1168 695 Op 2 . - CDS 1220744 - 1220872 168 ## - Term 1220911 - 1220948 6.1 1169 696 Op 1 . - CDS 1220953 - 1221987 1038 ## COG0647 Predicted sugar phosphatases of the HAD superfamily 1170 696 Op 2 . - CDS 1221993 - 1223804 2329 ## BBPR_1144 hypothetical protein 1171 697 Tu 1 . - CDS 1223939 - 1225261 641 ## PROTEIN SUPPORTED gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 1172 698 Op 1 1/0.062 - CDS 1225398 - 1226177 929 ## COG4905 Predicted membrane protein 1173 698 Op 2 . - CDS 1226177 - 1226764 575 ## COG1418 Predicted HD superfamily hydrolase - Prom 1226814 - 1226873 1.5 1174 699 Tu 1 . - CDS 1226898 - 1228385 1907 ## COG0165 Argininosuccinate lyase 1175 700 Op 1 . - CDS 1228539 - 1231808 3086 ## COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 1176 700 Op 2 2/0.023 - CDS 1231805 - 1233352 618 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen - Prom 1233380 - 1233439 14.6 1177 701 Op 1 27/0.000 - CDS 1233741 - 1234247 183 ## COG0732 Restriction endonuclease S subunits 1178 701 Op 2 . - CDS 1234247 - 1236814 2140 ## COG0286 Type I restriction-modification system methyltransferase subunit 1179 701 Op 3 . - CDS 1236807 - 1237631 387 ## BBIF_1094 hypothetical protein 1180 701 Op 4 . - CDS 1237650 - 1237856 183 ## Elen_0798 hypothetical protein - Prom 1237888 - 1237947 4.1 + Prom 1238101 - 1238160 3.4 1181 702 Op 1 . + CDS 1238278 - 1238592 102 ## 1182 702 Op 2 . + CDS 1238504 - 1239433 945 ## COG0582 Integrase + Term 1239553 - 1239591 -0.5 - Term 1239968 - 1240020 10.1 1183 703 Tu 1 . - CDS 1240047 - 1241285 1789 ## COG0137 Argininosuccinate synthase - Prom 1241311 - 1241370 7.4 1184 704 Op 1 4/0.008 - CDS 1241390 - 1241908 595 ## COG1438 Arginine repressor 1185 704 Op 2 9/0.000 - CDS 1241981 - 1242946 1368 ## COG0078 Ornithine carbamoyltransferase 1186 704 Op 3 13/0.000 - CDS 1243049 - 1244338 1694 ## COG4992 Ornithine/acetylornithine aminotransferase 1187 704 Op 4 10/0.000 - CDS 1244328 - 1245284 1275 ## COG0548 Acetylglutamate kinase 1188 704 Op 5 11/0.000 - CDS 1245344 - 1246513 1449 ## COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase) 1189 704 Op 6 . - CDS 1246510 - 1247604 1135 ## COG0002 Acetylglutamate semialdehyde dehydrogenase - Prom 1247632 - 1247691 2.8 1190 705 Op 1 . - CDS 1247707 - 1248327 588 ## BBPR_1162 hypothetical protein 1191 705 Op 2 40/0.000 - CDS 1248362 - 1250971 3475 ## COG0072 Phenylalanyl-tRNA synthetase beta subunit 1192 705 Op 3 4/0.008 - CDS 1250979 - 1252046 1653 ## COG0016 Phenylalanyl-tRNA synthetase alpha subunit 1193 705 Op 4 . - CDS 1252131 - 1252970 923 ## COG0566 rRNA methylases 1194 706 Op 1 4/0.008 + CDS 1253138 - 1253899 757 ## COG4619 ABC-type uncharacterized transport system, ATPase component 1195 706 Op 2 . + CDS 1253896 - 1254687 1065 ## COG0390 ABC-type uncharacterized transport system, permease component + Term 1254715 - 1254773 18.0 1196 707 Op 1 . - CDS 1254748 - 1255065 410 ## BBIF_1110 possible short-chain alcohol dehydrogenase 1197 707 Op 2 . - CDS 1255115 - 1255291 171 ## BBIF_1111 hypothetical protein - Prom 1255502 - 1255561 3.0 1198 708 Tu 1 . + CDS 1255440 - 1255994 107 ## BBPR_1170 family transcriptional regulator AraC - Term 1256040 - 1256092 0.6 1199 709 Tu 1 . - CDS 1256126 - 1257415 657 ## PROTEIN SUPPORTED gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 - Prom 1257470 - 1257529 1.8 1200 710 Tu 1 . - CDS 1257573 - 1258385 1013 ## BBIF_1114 hypothetical protein 1201 711 Tu 1 . - CDS 1258526 - 1258696 56 ## + Prom 1258368 - 1258427 2.0 1202 712 Tu 1 . + CDS 1258646 - 1258942 125 ## BBPR_1173 hypothetical protein 1203 713 Tu 1 . - CDS 1259037 - 1260110 1875 ## COG2855 Predicted membrane protein - Term 1260234 - 1260279 10.1 1204 714 Op 1 . - CDS 1260350 - 1261165 1107 ## COG0583 Transcriptional regulator 1205 714 Op 2 . - CDS 1261250 - 1261888 587 ## BBPR_1176 hypothetical protein 1206 714 Op 3 . - CDS 1261930 - 1263474 1625 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 1207 715 Tu 1 . + CDS 1263805 - 1264032 322 ## BBIF_1120 hypothetical protein 1208 716 Tu 1 . - CDS 1264113 - 1264307 157 ## 1209 717 Tu 1 . + CDS 1264581 - 1266917 2404 ## BBPR_1180 hypothetical protein + Term 1266989 - 1267036 5.1 - Term 1266696 - 1266752 3.4 1210 718 Tu 1 . - CDS 1266929 - 1267576 636 ## COG0400 Predicted esterase 1211 719 Tu 1 . + CDS 1267956 - 1268381 394 ## COG0242 N-formylmethionyl-tRNA deformylase - Term 1268413 - 1268448 -0.8 1212 720 Tu 1 . - CDS 1268453 - 1268878 436 ## BBIF_1124 hypothetical protein 1213 721 Tu 1 . - CDS 1268933 - 1269142 327 ## COG3478 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain - Term 1269516 - 1269558 1.9 1214 722 Tu 1 . - CDS 1269595 - 1269963 464 ## COG3824 Uncharacterized protein conserved in bacteria 1215 723 Tu 1 . + CDS 1270168 - 1270713 436 ## BBIF_1127 hypothetical protein + Term 1270772 - 1270802 -0.9 - Term 1270902 - 1270956 10.1 1216 724 Op 1 . - CDS 1270986 - 1272227 1301 ## COG4260 Putative virion core protein (lumpy skin disease virus) 1217 724 Op 2 . - CDS 1272323 - 1272556 324 ## BBIF_1129 hypothetical protein 1218 725 Tu 1 . + CDS 1273246 - 1273368 95 ## 1219 726 Tu 1 . - CDS 1273864 - 1273989 84 ## gi|224283291|ref|ZP_03646613.1| hypothetical protein BbifN4_05620 - Prom 1274033 - 1274092 4.3 1220 727 Tu 1 . + CDS 1274278 - 1274718 621 ## BBIF_1131 hypothetical protein + Term 1274749 - 1274793 -0.1 1221 728 Tu 1 . + CDS 1274901 - 1276571 1267 ## COG0515 Serine/threonine protein kinase 1222 729 Tu 1 . - CDS 1276705 - 1277316 713 ## COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain 1223 730 Tu 1 . + CDS 1277125 - 1277571 56 ## - Term 1277402 - 1277440 -0.7 1224 731 Tu 1 . - CDS 1277531 - 1278397 976 ## COG0500 SAM-dependent methyltransferases 1225 732 Tu 1 . + CDS 1278687 - 1279052 461 ## COG3304 Predicted membrane protein 1226 733 Tu 1 . - CDS 1279087 - 1279719 238 ## BBIF_1136 GCN5-related N-acetyltransferase 1227 734 Tu 1 . + CDS 1279881 - 1280174 215 ## gi|313140448|ref|ZP_07802641.1| predicted protein + Prom 1280301 - 1280360 5.4 1228 735 Tu 1 . + CDS 1280395 - 1281717 1336 ## COG3177 Uncharacterized conserved protein + Term 1281718 - 1281760 12.8 - Term 1282032 - 1282089 6.1 1229 736 Tu 1 . - CDS 1282112 - 1283206 1744 ## COG0012 Predicted GTPase, probable translation factor - Prom 1283287 - 1283346 3.3 - Term 1283399 - 1283442 1.7 1230 737 Op 1 . - CDS 1283443 - 1283634 232 ## BBIF_1150 aminotransferase, class I and II 1231 737 Op 2 . - CDS 1283615 - 1284571 1052 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 1284596 - 1284655 1.8 1232 738 Op 1 32/0.000 - CDS 1284753 - 1285433 1001 ## COG2011 ABC-type metal ion transport system, permease component 1233 738 Op 2 . - CDS 1285426 - 1286568 1286 ## COG1135 ABC-type metal ion transport system, ATPase component 1234 738 Op 3 . - CDS 1286565 - 1287191 688 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 1235 738 Op 4 28/0.000 - CDS 1287020 - 1287598 355 ## COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 1236 738 Op 5 . - CDS 1287591 - 1288577 1312 ## COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 1237 739 Tu 1 . - CDS 1288956 - 1289852 1370 ## COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen - Prom 1289978 - 1290037 2.2 1238 740 Tu 1 . + CDS 1289776 - 1290036 154 ## 1239 741 Tu 1 . - CDS 1290050 - 1290259 83 ## gi|313140457|ref|ZP_07802650.1| predicted protein + Prom 1290102 - 1290161 2.4 1240 742 Tu 1 . + CDS 1290201 - 1291142 880 ## COG1446 Asparaginase + Term 1291259 - 1291296 1.0 - Term 1291132 - 1291165 2.0 1241 743 Op 1 . - CDS 1291297 - 1292100 1051 ## COG0345 Pyrroline-5-carboxylate reductase 1242 743 Op 2 . - CDS 1292184 - 1293587 1596 ## COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 1243 744 Op 1 19/0.000 + CDS 1293781 - 1296438 2292 ## COG4585 Signal transduction histidine kinase 1244 744 Op 2 . + CDS 1296525 - 1297292 757 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain + Term 1297309 - 1297370 6.6 - Term 1297298 - 1297352 10.2 1245 745 Tu 1 . - CDS 1297362 - 1300217 4401 ## COG0671 Membrane-associated phospholipid phosphatase - Prom 1300358 - 1300417 2.8 1246 746 Tu 1 . + CDS 1300428 - 1300571 95 ## - Term 1300534 - 1300568 6.9 1247 747 Op 1 36/0.000 - CDS 1300611 - 1303319 2833 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 1248 747 Op 2 . - CDS 1303346 - 1304398 1071 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component - Prom 1304516 - 1304575 1.7 1249 748 Tu 1 . + CDS 1304641 - 1304988 182 ## + Term 1305048 - 1305079 2.5 - Term 1304874 - 1304912 8.1 1250 749 Tu 1 . - CDS 1304998 - 1306314 2084 ## COG2873 O-acetylhomoserine sulfhydrylase - Term 1306516 - 1306553 -1.0 1251 750 Tu 1 . - CDS 1306560 - 1307414 1218 ## COG4905 Predicted membrane protein 1252 751 Tu 1 . + CDS 1307669 - 1308544 1197 ## COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase + Term 1308574 - 1308619 12.4 - Term 1308633 - 1308672 1.7 1253 752 Tu 1 . - CDS 1308690 - 1310936 1972 ## COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 1254 753 Tu 1 . + CDS 1310776 - 1311246 322 ## COG3695 Predicted methylated DNA-protein cysteine methyltransferase 1255 754 Op 1 2/0.023 - CDS 1311304 - 1312818 832 ## COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 1256 754 Op 2 2/0.023 - CDS 1312815 - 1314344 1163 ## COG0606 Predicted ATPase with chaperone activity 1257 754 Op 3 . - CDS 1314344 - 1314730 512 ## COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 1258 755 Op 1 . + CDS 1315039 - 1316010 674 ## COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 1259 755 Op 2 . + CDS 1316056 - 1316727 726 ## COG4122 Predicted O-methyltransferase + Term 1316863 - 1316912 2.8 1260 756 Op 1 . - CDS 1316724 - 1317665 1059 ## COG1611 Predicted Rossmann fold nucleotide-binding protein 1261 756 Op 2 . - CDS 1317717 - 1318985 1582 ## COG3004 Na+/H+ antiporter - Prom 1319065 - 1319124 2.4 1262 757 Tu 1 . - CDS 1319708 - 1320892 1334 ## COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities - Prom 1321105 - 1321164 3.7 - TRNA 1321019 - 1321095 70.7 # Arg ACG 0 0 - TRNA 1321142 - 1321218 74.2 # Arg ACG 0 0 1263 758 Op 1 24/0.000 - CDS 1321320 - 1322633 277 ## PROTEIN SUPPORTED gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 1264 758 Op 2 5/0.000 - CDS 1322734 - 1323453 1064 ## COG0740 Protease subunit of ATP-dependent Clp proteases 1265 758 Op 3 . - CDS 1323459 - 1324040 771 ## COG0740 Protease subunit of ATP-dependent Clp proteases + Prom 1324056 - 1324115 4.5 1266 759 Tu 1 . + CDS 1324234 - 1324368 78 ## gi|224283330|ref|ZP_03646652.1| hypothetical protein BbifN4_05825 + Term 1324516 - 1324568 12.1 - Term 1324369 - 1324428 2.7 1267 760 Tu 1 . - CDS 1324575 - 1325978 1784 ## COG0038 Chloride channel protein EriC 1268 761 Op 1 . - CDS 1326184 - 1327569 2226 ## COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 1269 761 Op 2 . - CDS 1327622 - 1328908 1302 ## COG0349 Ribonuclease D 1270 761 Op 3 . - CDS 1328898 - 1329488 467 ## BBPR_1233 hypothetical protein - Prom 1329541 - 1329600 3.0 1271 762 Tu 1 . + CDS 1329403 - 1329699 65 ## + Term 1329909 - 1329953 4.3 1272 763 Op 1 11/0.000 - CDS 1329624 - 1330505 1232 ## COG1180 Pyruvate-formate lyase-activating enzyme - Term 1330632 - 1330671 9.6 1273 763 Op 2 . - CDS 1330697 - 1333072 3876 ## COG1882 Pyruvate-formate lyase - Prom 1333116 - 1333175 2.4 1274 764 Op 1 . - CDS 1333192 - 1333428 354 ## BBPR_1236 hypothetical protein 1275 764 Op 2 . - CDS 1333506 - 1335203 2316 ## COG0171 NAD synthase 1276 764 Op 3 . - CDS 1335286 - 1336437 1314 ## COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase 1277 764 Op 4 . - CDS 1336474 - 1337025 322 ## BBPR_1239 ATP-binding protein + Prom 1337087 - 1337146 1.8 1278 765 Tu 1 . + CDS 1337177 - 1338028 1098 ## COG0561 Predicted hydrolases of the HAD superfamily + Term 1338104 - 1338141 5.1 - Term 1338090 - 1338131 8.4 1279 766 Tu 1 . - CDS 1338174 - 1339259 888 ## COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family - Prom 1339295 - 1339354 6.2 + Prom 1339238 - 1339297 1.6 1280 767 Op 1 . + CDS 1339353 - 1339595 283 ## BLD_0394 Xre family transcriptional regulator 1281 767 Op 2 . + CDS 1339595 - 1339963 307 ## BLIF_1199 hypothetical protein 1282 767 Op 3 . + CDS 1339960 - 1340673 141 ## gi|225351317|ref|ZP_03742340.1| hypothetical protein BIFPSEUDO_02910 1283 767 Op 4 . + CDS 1340724 - 1341500 466 ## BLIF_1198 hypothetical protein 1284 768 Op 1 . + CDS 1341675 - 1341866 270 ## gi|313140498|ref|ZP_07802691.1| predicted protein 1285 768 Op 2 . + CDS 1341863 - 1342018 87 ## BLIF_1197 hypothetical protein 1286 768 Op 3 . + CDS 1342015 - 1343145 1168 ## BLIF_1196 hypothetical protein 1287 768 Op 4 . + CDS 1343142 - 1343396 282 ## BLIF_1195 hypothetical protein 1288 768 Op 5 . + CDS 1343411 - 1343890 383 ## BLIF_1194 hypothetical protein 1289 769 Tu 1 . + CDS 1344003 - 1344674 941 ## BLIF_1193 hypothetical protein 1290 770 Op 1 . - CDS 1346076 - 1347389 1181 ## BBMN68_335 HipA domain protein 1291 770 Op 2 . - CDS 1347432 - 1347800 499 ## BLIF_1154 hypothetical protein 1292 770 Op 3 . - CDS 1347822 - 1348223 550 ## BLIF_1155 hypothetical protein - Prom 1348264 - 1348323 2.8 - Term 1348233 - 1348271 4.1 1293 771 Tu 1 . - CDS 1348331 - 1348798 509 ## BDP_0920 hypothetical protein - Term 1348823 - 1348866 4.8 1294 772 Op 1 . - CDS 1348892 - 1351099 2401 ## COG0550 Topoisomerase IA 1295 772 Op 2 . - CDS 1351119 - 1351550 737 ## BLIF_1157 hypothetical protein 1296 773 Op 1 . + CDS 1351959 - 1352255 235 ## BLIF_1158 hypothetical protein 1297 773 Op 2 . + CDS 1352346 - 1352627 342 ## BLIF_1161 hypothetical protein + Term 1352644 - 1352684 7.2 1298 774 Op 1 . + CDS 1353078 - 1353458 359 ## BLIF_1162 hypothetical protein 1299 774 Op 2 . + CDS 1353461 - 1355089 1855 ## COG3843 Type IV secretory pathway, VirD2 components (relaxase) 1300 774 Op 3 . + CDS 1355133 - 1356185 974 ## BLIF_1164 hypothetical protein 1301 775 Tu 1 . - CDS 1357589 - 1357804 142 ## Blon_0983 phage integrase family protein 1302 776 Op 1 . + CDS 1357998 - 1358189 204 ## BBIF_1201 hypothetical protein 1303 776 Op 2 . + CDS 1358192 - 1358959 637 ## COG2184 Protein involved in cell division + Term 1359030 - 1359087 -0.9 1304 777 Tu 1 . - CDS 1359107 - 1360435 1196 ## COG0582 Integrase 1305 778 Tu 1 . - CDS 1360582 - 1361688 264 ## PROTEIN SUPPORTED gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase - Prom 1361877 - 1361936 3.4 1306 779 Tu 1 . + CDS 1362290 - 1362886 99 ## - Term 1362836 - 1362870 0.2 1307 780 Tu 1 . - CDS 1362979 - 1363116 64 ## BLIF_1148 hypothetical protein - Prom 1363217 - 1363276 4.9 + Prom 1363161 - 1363220 4.7 1308 781 Op 1 . + CDS 1363258 - 1363554 332 ## BBIF_1191 addiction module antitoxin, RelB/DinJ family protein 1309 781 Op 2 . + CDS 1363547 - 1363906 238 ## BBIF_1192 hypothetical protein + Term 1363956 - 1363992 -0.8 1310 782 Tu 1 . + CDS 1364088 - 1364288 82 ## + Term 1364418 - 1364456 -1.0 + Prom 1364734 - 1364793 5.0 1311 783 Tu 1 . + CDS 1364924 - 1366012 508 ## BBPR_1244 hypothetical protein + Term 1366043 - 1366075 -0.2 - Term 1365733 - 1365779 0.5 1312 784 Tu 1 . - CDS 1365943 - 1366293 77 ## gi|314924434|gb|EFS88265.1| hypothetical protein HMPREF9603_00215 1313 785 Tu 1 . + CDS 1366292 - 1366477 174 ## BBIF_1194 hypothetical protein + Term 1366627 - 1366653 -0.6 - Term 1366490 - 1366554 3.5 1314 786 Tu 1 . - CDS 1366587 - 1367039 -150 ## gi|313140526|ref|ZP_07802719.1| predicted protein 1315 787 Tu 1 . - CDS 1367643 - 1369973 3357 ## COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases - Prom 1369998 - 1370057 2.4 1316 788 Op 1 . - CDS 1370123 - 1370599 596 ## COG0756 dUTPase 1317 788 Op 2 . - CDS 1370599 - 1370892 425 ## BBIF_1207 hypothetical protein - Prom 1370948 - 1371007 4.2 + Prom 1370951 - 1371010 2.7 1318 789 Tu 1 . + CDS 1371042 - 1372097 841 ## BBPR_1250 hypothetical protein 1319 790 Tu 1 . - CDS 1372214 - 1373446 947 ## COG1524 Uncharacterized proteins of the AP superfamily + Prom 1373460 - 1373519 2.5 1320 791 Tu 1 . + CDS 1373595 - 1376267 3105 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 1321 792 Op 1 . - CDS 1376495 - 1381120 3115 ## COG1201 Lhr-like helicases 1322 792 Op 2 . - CDS 1381190 - 1381393 235 ## COG3655 Predicted transcriptional regulator 1323 793 Tu 1 . + CDS 1382055 - 1383494 1777 ## COG1027 Aspartate ammonia-lyase - Term 1383363 - 1383399 1.1 1324 794 Tu 1 . - CDS 1383575 - 1385887 2995 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 1325 795 Tu 1 . - CDS 1386019 - 1387521 2027 ## COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) - Prom 1387565 - 1387624 2.7 1326 796 Tu 1 . - CDS 1387696 - 1388367 591 ## BBIF_1217 hypothetical protein - Prom 1388542 - 1388601 1.8 1327 797 Op 1 . + CDS 1388197 - 1388541 93 ## 1328 797 Op 2 . + CDS 1388565 - 1389662 1103 ## COG0142 Geranylgeranyl pyrophosphate synthase 1329 797 Op 3 . + CDS 1389727 - 1391868 2822 ## COG0515 Serine/threonine protein kinase + Term 1391905 - 1391953 14.4 - Term 1391830 - 1391882 5.0 1330 798 Tu 1 . - CDS 1391966 - 1392682 790 ## COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase 1331 799 Tu 1 . + CDS 1392731 - 1393330 673 ## BBPR_1264 hypothetical protein - Term 1393283 - 1393321 2.0 1332 800 Tu 1 . - CDS 1393369 - 1394415 1432 ## COG0547 Anthranilate phosphoribosyltransferase - Prom 1394460 - 1394519 3.1 - Term 1394507 - 1394543 3.7 1333 801 Op 1 . - CDS 1394577 - 1395080 -410 ## 1334 801 Op 2 7/0.000 - CDS 1395108 - 1397990 4005 ## COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) - Prom 1398018 - 1398077 3.1 - Term 1398140 - 1398181 9.1 1335 802 Op 1 . - CDS 1398202 - 1398867 1048 ## PROTEIN SUPPORTED gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 1336 802 Op 2 . - CDS 1398943 - 1399170 112 ## + Prom 1398971 - 1399030 2.9 1337 803 Tu 1 . + CDS 1399055 - 1399252 139 ## gi|313140546|ref|ZP_07802739.1| predicted protein - Term 1400107 - 1400161 -0.9 1338 804 Tu 1 . - CDS 1400223 - 1400648 419 ## BBPR_1269 RecX-like protein 1339 805 Tu 1 . - CDS 1400840 - 1402030 1679 ## COG0468 RecA/RadA recombinase - Prom 1402239 - 1402298 3.7 1340 806 Tu 1 . + CDS 1402029 - 1402433 87 ## - Term 1402070 - 1402098 -0.9 1341 807 Tu 1 . - CDS 1402300 - 1402533 273 ## BBPR_1271 hypothetical protein 1342 808 Tu 1 . + CDS 1402453 - 1402773 148 ## - Term 1402599 - 1402642 11.4 1343 809 Op 1 2/0.023 - CDS 1402705 - 1403217 602 ## COG1396 Predicted transcriptional regulators 1344 809 Op 2 6/0.000 - CDS 1403278 - 1403823 210 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase - Term 1403845 - 1403888 11.3 1345 809 Op 3 . - CDS 1403895 - 1404566 249 ## PROTEIN SUPPORTED gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase 1346 810 Tu 1 . - CDS 1404693 - 1407545 3068 ## COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins - Prom 1407676 - 1407735 2.4 + Prom 1407654 - 1407713 2.6 1347 811 Tu 1 . + CDS 1407828 - 1408553 690 ## COG2184 Protein involved in cell division - Term 1408424 - 1408461 -0.4 1348 812 Tu 1 . - CDS 1408619 - 1409668 1245 ## COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase 1349 813 Op 1 . - CDS 1409771 - 1411210 415 ## PROTEIN SUPPORTED gi|229216491|ref|ZP_04342811.1| SSU ribosomal protein S12P methylthiotransferase 1350 813 Op 2 . - CDS 1411300 - 1411527 106 ## + Prom 1411254 - 1411313 2.1 1351 814 Tu 1 . + CDS 1411432 - 1412043 965 ## COG2357 Uncharacterized protein conserved in bacteria - Term 1412017 - 1412063 4.7 1352 815 Tu 1 . - CDS 1412164 - 1413150 893 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 1353 816 Tu 1 . - CDS 1413337 - 1414170 1076 ## COG0670 Integral membrane protein, interacts with FtsH - Term 1414200 - 1414238 3.7 1354 817 Tu 1 . - CDS 1414273 - 1415091 1232 ## BBPR_1282 hypothetical protein 1355 818 Op 1 . + CDS 1415257 - 1416696 1272 ## BBIF_1240 atypical histidine kinase sensor of two-component system 1356 818 Op 2 . + CDS 1416693 - 1417364 441 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 1357 818 Op 3 . + CDS 1417451 - 1419556 1762 ## COG1479 Uncharacterized conserved protein 1358 819 Tu 1 . + CDS 1419666 - 1419917 117 ## + Term 1420165 - 1420201 2.4 - Term 1419679 - 1419722 7.4 1359 820 Op 1 . - CDS 1419800 - 1421383 1879 ## COG0194 Guanylate kinase 1360 820 Op 2 24/0.000 - CDS 1421402 - 1424782 4849 ## COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) 1361 820 Op 3 . - CDS 1424775 - 1425992 1504 ## COG0505 Carbamoylphosphate synthase small subunit 1362 820 Op 4 6/0.000 - CDS 1426080 - 1426751 662 ## COG0781 Transcription termination factor 1363 820 Op 5 . - CDS 1426773 - 1427336 922 ## COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) - Prom 1427386 - 1427445 2.0 1364 821 Tu 1 . + CDS 1427314 - 1427499 180 ## 1365 822 Tu 1 . - CDS 1427609 - 1427809 282 ## BBIF_1248 hypothetical protein - Prom 1427844 - 1427903 3.2 1366 823 Tu 1 . + CDS 1428524 - 1429666 680 ## COG0477 Permeases of the major facilitator superfamily + Term 1429900 - 1429937 -0.9 1367 824 Tu 1 . - CDS 1429667 - 1430788 1053 ## COG4222 Uncharacterized protein conserved in bacteria 1368 825 Op 1 . - CDS 1430901 - 1432157 1073 ## COG4222 Uncharacterized protein conserved in bacteria 1369 825 Op 2 . - CDS 1432154 - 1432270 70 ## - Term 1432309 - 1432358 16.1 1370 826 Op 1 30/0.000 - CDS 1432403 - 1433602 1278 ## PROTEIN SUPPORTED gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 - Prom 1433659 - 1433718 1.6 - Term 1433698 - 1433743 11.2 1371 826 Op 2 51/0.000 - CDS 1433776 - 1435905 2992 ## COG0480 Translation elongation factors (GTPases) 1372 826 Op 3 56/0.000 - CDS 1435933 - 1436403 785 ## PROTEIN SUPPORTED gi|224283422|ref|ZP_03646744.1| 30S ribosomal protein S7 1373 826 Op 4 . - CDS 1436409 - 1436780 622 ## PROTEIN SUPPORTED gi|23465669|ref|NP_696272.1| 30S ribosomal protein S12 - TRNA 1437095 - 1437170 80.4 # His GTG 0 0 - Term 1437585 - 1437628 -0.7 1374 827 Tu 1 . - CDS 1437646 - 1437942 63 ## + Prom 1437767 - 1437826 1.6 1375 828 Tu 1 . + CDS 1437997 - 1439022 1431 ## COG2008 Threonine aldolase - Term 1438924 - 1438974 -0.3 1376 829 Tu 1 . - CDS 1439047 - 1440237 1320 ## COG0438 Glycosyltransferase - Prom 1440399 - 1440458 1.7 - Term 1440467 - 1440516 18.0 1377 830 Tu 1 . - CDS 1440575 - 1444417 4650 ## BBPR_1300 glycosyl hydrolase family protein (EC:3.2.1.22) - Prom 1444612 - 1444671 2.4 + Prom 1444578 - 1444637 3.7 1378 831 Tu 1 . + CDS 1444703 - 1445983 1396 ## COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) + Prom 1446192 - 1446251 2.8 1379 832 Tu 1 . + CDS 1446301 - 1447053 1245 ## COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase + Term 1447184 - 1447218 3.9 1380 833 Tu 1 . - CDS 1447055 - 1447153 73 ## 1381 834 Tu 1 . + CDS 1447261 - 1451007 5583 ## COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain + Term 1451028 - 1451081 21.6 - Term 1451016 - 1451069 21.6 1382 835 Op 1 . - CDS 1451114 - 1451791 739 ## BBPR_1304 hypothetical protein 1383 835 Op 2 . - CDS 1451892 - 1452530 788 ## BBIF_1262 hypothetical protein - Prom 1452710 - 1452769 5.7 + Prom 1452672 - 1452731 3.1 1384 836 Op 1 . + CDS 1452908 - 1453729 627 ## COG3663 G:T/U mismatch-specific DNA glycosylase 1385 836 Op 2 . + CDS 1453789 - 1454001 185 ## BBIF_1264 hypothetical protein 1386 837 Op 1 . - CDS 1454305 - 1454682 745 ## COG0346 Lactoylglutathione lyase and related lyases 1387 837 Op 2 . - CDS 1454775 - 1454993 290 ## BBIF_1266 hypothetical protein 1388 837 Op 3 . - CDS 1455038 - 1456627 1509 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair - Prom 1456683 - 1456742 2.1 + Prom 1456614 - 1456673 1.8 1389 838 Op 1 . + CDS 1456693 - 1456887 177 ## 1390 838 Op 2 13/0.000 + CDS 1456809 - 1458317 2278 ## COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase 1391 838 Op 3 2/0.023 + CDS 1458390 - 1459427 868 ## PROTEIN SUPPORTED gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 1392 838 Op 4 . + CDS 1459555 - 1460820 2028 ## COG0151 Phosphoribosylamine-glycine ligase + Term 1460949 - 1460995 11.2 - Term 1460941 - 1460977 9.6 1393 839 Op 1 . - CDS 1460996 - 1463134 2862 ## COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 1394 839 Op 2 . - CDS 1463209 - 1463412 81 ## 1395 840 Op 1 . + CDS 1463531 - 1463761 269 ## BBIF_1272 esterase 1396 840 Op 2 3/0.016 + CDS 1463773 - 1464930 1239 ## COG0627 Predicted esterase 1397 840 Op 3 . + CDS 1464927 - 1467545 2662 ## COG2898 Uncharacterized conserved protein 1398 841 Tu 1 . - CDS 1467485 - 1467772 85 ## BBIF_1274 hypothetical protein - Prom 1467993 - 1468052 2.3 1399 842 Tu 1 . - CDS 1468218 - 1469123 1469 ## COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin - Prom 1469174 - 1469233 3.9 1400 843 Tu 1 . - CDS 1469244 - 1470011 727 ## BBPR_1319 hypothetical protein - Prom 1470042 - 1470101 4.8 1401 844 Op 1 . + CDS 1470010 - 1470357 596 ## PROTEIN SUPPORTED gi|224283446|ref|ZP_03646768.1| ribosomal protein L28 1402 844 Op 2 . + CDS 1470434 - 1470739 518 ## PROTEIN SUPPORTED gi|224283447|ref|ZP_03646769.1| ribosomal protein S14 1403 844 Op 3 . + CDS 1470786 - 1471043 445 ## PROTEIN SUPPORTED gi|224283448|ref|ZP_03646770.1| ribosomal protein L31 1404 845 Op 1 . + CDS 1471255 - 1471377 210 ## PROTEIN SUPPORTED gi|224283449|ref|ZP_03646771.1| ribosomal protein L36 1405 845 Op 2 . + CDS 1471377 - 1471547 290 ## PROTEIN SUPPORTED gi|224283450|ref|ZP_03646772.1| ribosomal protein L32 + Term 1471633 - 1471677 12.0 + Prom 1471648 - 1471707 2.3 1406 846 Op 1 7/0.000 + CDS 1471756 - 1472877 925 ## COG0701 Predicted permeases 1407 846 Op 2 . + CDS 1472882 - 1473682 797 ## COG3689 Predicted membrane protein 1408 846 Op 3 . + CDS 1473679 - 1473948 241 ## BBPR_1327 hypothetical protein + Term 1473959 - 1474012 4.2 - Term 1473941 - 1474004 12.0 1409 847 Tu 1 . - CDS 1474106 - 1474525 504 ## COG0735 Fe2+/Zn2+ uptake regulation proteins - Term 1474576 - 1474629 20.2 1410 848 Op 1 29/0.000 - CDS 1474653 - 1475822 1391 ## COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) 1411 848 Op 2 . - CDS 1475806 - 1476303 705 ## COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 1412 848 Op 3 . - CDS 1476347 - 1477336 1280 ## COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases + Prom 1477324 - 1477383 1.8 1413 849 Tu 1 . + CDS 1477592 - 1479556 2045 ## COG1154 Deoxyxylulose-5-phosphate synthase - TRNA 1479651 - 1479724 76.2 # Arg TCT 0 0 1414 850 Tu 1 . - CDS 1479905 - 1480192 350 ## BBIF_1290 hypothetical protein - Prom 1480212 - 1480271 2.0 1415 851 Tu 1 . + CDS 1480539 - 1481816 1442 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 1416 852 Tu 1 . + CDS 1481947 - 1482816 1235 ## COG1737 Transcriptional regulators - Term 1483055 - 1483097 -0.9 1417 853 Op 1 3/0.016 - CDS 1483150 - 1485249 2218 ## COG0358 DNA primase (bacterial type) 1418 853 Op 2 . - CDS 1485295 - 1486575 1276 ## COG0232 dGTP triphosphohydrolase 1419 854 Tu 1 . - CDS 1486690 - 1488048 1610 ## COG0787 Alanine racemase - Prom 1488268 - 1488327 1.9 1420 855 Tu 1 . + CDS 1488283 - 1489710 2032 ## COG0531 Amino acid transporters + Term 1489863 - 1489919 0.1 1421 856 Tu 1 . - CDS 1489880 - 1490407 467 ## COG0454 Histone acetyltransferase HPA2 and related acetyltransferases 1422 857 Tu 1 . - CDS 1490597 - 1491082 815 ## COG1854 LuxS protein involved in autoinducer AI2 synthesis 1423 858 Tu 1 . - CDS 1491251 - 1493251 2194 ## COG0514 Superfamily II DNA helicase - Term 1493338 - 1493395 4.0 1424 859 Op 1 8/0.000 - CDS 1493438 - 1494625 1859 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 1425 859 Op 2 . - CDS 1494727 - 1495737 539 ## PROTEIN SUPPORTED gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 - Prom 1495893 - 1495952 1.6 - Term 1496091 - 1496159 7.5 1426 860 Op 1 . - CDS 1496162 - 1496779 399 ## BBIF_1303 hypothetical protein 1427 860 Op 2 . - CDS 1496789 - 1497409 535 ## Jden_0210 hypothetical protein Predicted protein(s) >gi|197324945|gb|DS990229.1| GENE 1 3 - 509 212 168 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 2 157 161 312 317 86 38 4e-15 VSIAERPPEADDRSGFGHWEADSVIGMGCDLHTEAERRTRFLMARVIPDKTAERSVGARL AMFAPLPAAARLSVTHDNGTGFARHARLRDEPGMATYFADPYSSWQRGGNENRNGMIRRY LPKRTIIEPGMARELQEIVDETDNRPMRALGHRTPAEAFADELPDLQL >gi|197324945|gb|DS990229.1| GENE 2 596 - 1813 1348 405 aa, chain - ## HITS:1 COG:FN1101 KEGG:ns NR:ns ## COG: FN1101 COG1373 # Protein_GI_number: 19704436 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Fusobacterium nucleatum # 16 401 82 449 470 144 29.0 3e-34 MLVDFSKAPDDVLGYFVDLRNDLDAFFMYLSSFYGVELHRRDSLIIFDEVQLYPKAREAI KQLVADGRYDYIETGSLVSIRENVKDILIPSEEESIRLNPMDFDEFLWALGEKPLSALIA DSFKKRRPLPDSLHRKAMRLFREYMLVGGMPQAVSKYVETHDFSKVDNVKRNILRLYRQD ISKHGGSDRIRITRIFDNLVGQLSKKEKKFNITSLGEKAKTRDYEDAFFWLSDAFITNDC FNSTDPSVGLSISEDHSTVKCYAADTGLLTTLALADSEQTGSNLYRDILLERIEINEGML AENVVAQLLRVNGHRLFFYSRSDRDDPSNRMEIDFLIVEPYENAAMKYRVSPIEVKSSKR YRTVSLDKFKAKFDKKVGTRYVLHPKPLVVENDVVKLPIYMAGLL >gi|197324945|gb|DS990229.1| GENE 3 2125 - 2517 204 130 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLLQQPVLAEQCHDKGPRRRLLRPYPCRSSVACSDSSPQRGEPEKHLLRDVELELGVLPV FFVLPCRGYSIASQGCIAIKRFHKLAYRWQIRKADRRHLAYVWQFIPERPQLEGTQLPPN RSVTKTSCHI >gi|197324945|gb|DS990229.1| GENE 4 2626 - 2805 293 59 aa, chain - ## HITS:1 COG:no KEGG:BLD_0661 NR:ns ## KEGG: BLD_0661 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_DJO10A # Pathway: not_defined # 1 56 1 56 121 67 87.0 1e-10 MRVLGNILWIILGGLAIAIGWALVGLILCISIIGIPLGIQAFKMAKLALWPFGAEIANL >gi|197324945|gb|DS990229.1| GENE 5 2994 - 3179 102 61 aa, chain + ## HITS:1 COG:no KEGG:BLIF_0731 NR:ns ## KEGG: BLIF_0731 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 19 61 6 48 48 77 88.0 2e-13 MGFTVDLNDDRLLDVCRTKTHQGDAMNLYRYAMFIAHACRGSFVGNILFANPQMALFSML V >gi|197324945|gb|DS990229.1| GENE 6 3383 - 5461 2001 692 aa, chain + ## HITS:1 COG:lin2733 KEGG:ns NR:ns ## COG: lin2733 COG0477 # Protein_GI_number: 16801794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 26 479 8 478 493 326 36.0 9e-89 MPLPTEGNAVTSQKTAESGSAASSVKPIDSHARFIVVGVIVVGSFIALLNQTVMSPALPA LMRDFNITTGTVQWVTSVYMLVSGIMVPISGYLIDKFSTRKLFAGALATFMIGTLLCAVA PNFVLLLIGRVLQSAGSGVLLPLVAVVPMLVYPPDKRGTAMGMAGIVMAAGPAIGPVVGG LVIDSFGWRLMFIGIAVVALVILVGGTMMLKNVSELKNPKLNVLSVILSTIAFGGLLYGF SSASTMGWASPVVITSIVVGLVAFVAFVYKQVKLDEPLLRVDTLATRNFRNSAILVTLIN AAVAATNVTLPIFIQNVLGQSATVTGMVMLPAAAVGIILSPVAGAAFDKFGPRGVGIGGL ALMTISLGLLGTINTKTSVLFVAVFCALQASGQAIANMPINTWGVNALPNDMIAHGNAIA NTGRQIAAAIATSLLVTAETSMTASHMSQGVKSATASGIAFSYLLCAAISLVALIICIFT VTSRAKEKAARNAKASEAQASAEVAAETTEGQPAEHHYAGAYVAPAASLFKQAQEQSIGG IMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMKSIATYESRTV STGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVARILAKKQFKKL PVVDGDGRLVGVIRRKSVMEHAFDALFPKDDR >gi|197324945|gb|DS990229.1| GENE 7 5629 - 5919 226 96 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTKRHKPSHNKRGTEIRPLQAASSRSSCSAATDSTYTYHNQEPNPRKQQKPLNSSIPLQ RSHHGIRTPTHVCVHDSSNEPYPPLDGRLQYRDAMR >gi|197324945|gb|DS990229.1| GENE 8 5885 - 6139 250 84 aa, chain - ## HITS:1 COG:Rv2167c KEGG:ns NR:ns ## COG: Rv2167c COG2801 # Protein_GI_number: 15609304 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis H37Rv # 3 81 266 344 346 78 48.0 3e-15 MLPSTGTVGDSYDNAMTESVNGAYKTELVWRRKPFADLAEPELATFRWVSWWNSKRLHQS LGCRTPEQIETEYHANQAAQAVSQ >gi|197324945|gb|DS990229.1| GENE 9 6209 - 6523 373 104 aa, chain + ## HITS:1 COG:RSc0248 KEGG:ns NR:ns ## COG: RSc0248 COG1484 # Protein_GI_number: 17544967 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Ralstonia solanacearum # 6 80 103 179 281 64 46.0 4e-11 MACQFNLVLYGPVGTGKTHLAVALGRLACMRAIPVGFFTATGLLMRLRRAKRGRLDAELR QIARARLPVIDEFGYMPIDRTVRHGRLTGFEGGSYRSEHALMTR >gi|197324945|gb|DS990229.1| GENE 10 6945 - 7166 129 73 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0090 NR:ns ## KEGG: BBPR_0090 # Name: not_defined # Def: IS204/IS1001/IS1096/IS1165 family transposase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 73 4 76 76 138 100.0 9e-32 MVSWAEPGSRFTRDFESECAWPVSVANQKTVGGFPHIVWRTAGDIARRVAERLGTAMPSP FDGLAAIGVATMC >gi|197324945|gb|DS990229.1| GENE 11 7495 - 7902 370 135 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0091 NR:ns ## KEGG: BBPR_0091 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 135 1 135 135 232 98.0 5e-60 MAAIRERDIPAGERAWQQWNDAAQRLREDGADSESLMPALPRPTWAMAVRYTLYLLERKA PGPGVEVRVAPWGAVKILDGPASDPHNLTPPDVIELDPEVWLRLAAGITTWSQEKDAGRI TAVGERDDLSDLLPL >gi|197324945|gb|DS990229.1| GENE 12 7999 - 8217 68 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPVLLCDGLVTTPISSGERCVTLCNRLQKHEISYRICHKYAKSAIYQPHLETTENVATL ENNVLQHLTQAR >gi|197324945|gb|DS990229.1| GENE 13 8239 - 10692 4129 817 aa, chain + ## HITS:1 COG:slr1367 KEGG:ns NR:ns ## COG: slr1367 COG0058 # Protein_GI_number: 16330178 # Func_class: G Carbohydrate transport and metabolism # Function: Glucan phosphorylase # Organism: Synechocystis # 8 816 33 841 855 754 49.0 0 MTEITAPKSPVTTAEFADGIREQLKYSQGVTVEQATPADVYVASSLVVRHYLQDAWFKTQ QDMVNGNTKAVGYLSAEFLMGKQLRNALLNAGMIDQFDEAVKDLGFEPQDVIDVEHEPGL GNGGLGRLAACFIDSLASLGVPAFGYGIQYKYGIFEQAFDKDGKQIEKPDYWLTNEEPWG HIDYNRSQKVSFGGEVVEENGKKVWKPAWSVRAVPVDYMVPGYASGRVNTLRLWSAKSYD EFDLLTFNKSEYLDAVKPQVKAENISKILYPEDSTPQGKALRLEQQYFFVAASLHDAIRV FYPGQSKPDLTTFPSKITFQLNDTHPVIGIPELMRILIDEYGYDWDTAWSITTKTFNYTC HTLLPEALEVWPAKLISELLPRHMEIINEINEHFLAELKTKTRDKAKIERMRIVTDEENP KVRMAYLATAGGSHVNGVAELHSELLKDVTLRDFSDLYGDKFTNVTNGVTPRRFIRLANP RLSALITEGLGTDKWLSDLELLKGLEPLAKDDEFVKKFAAVKQANKEDFTAYAKREYGFD LDPNTMFNTMVKRLHEYKRQSLKILALIAKYADIKSGRVSADDVLPRTVIFGAKSAPGYY LAKMTIQLINNVARVVNNDPDVKGKLHVFFPWNYNVRLAQHLIPATDLDEQISQAGKEAS GTGNMKFALNGALTVGTLDGANVEIRERVGAENFFLFGMTVDEVDKLYEDGYSPAKYYEA DPRLKAAIDMVSDGTFSNGDRNTYAPLVADWLTKDWFMTLADFTAYSSIQSEIEALYRDP LEWNRKAVLNVANSGYFSSDRSIQDYLDNIWHTSPLA >gi|197324945|gb|DS990229.1| GENE 14 11411 - 11632 369 73 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0127 NR:ns ## KEGG: BBIF_0127 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 61 1 61 73 114 100.0 2e-24 MENKSSNGWKFFALFFGALLAAVVGLYIYKQQNPDYDPWEEPWENSSSPVDLGLTKDADK GDADEAEAAPEAA >gi|197324945|gb|DS990229.1| GENE 15 11819 - 12604 698 261 aa, chain + ## HITS:1 COG:MT0119 KEGG:ns NR:ns ## COG: MT0119 COG0705 # Protein_GI_number: 15839491 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein (homolog of Drosophila rhomboid) # Organism: Mycobacterium tuberculosis CDC1551 # 29 249 68 265 284 91 33.0 2e-18 MSNGRFSLFPGAPSAHNLFSKRAIQYQWRSNGPVFTSAIIIACVAVWVVEMVFSLFWPLG LATMIYYGRFDPLTAVAQPWMFLTSMFLHSPKSVLHILFNMLALWSVGPVLEKMMGHWPF LALYVLSGLGGGLGLMSWAALWPGGTGWLGGAYGASGALFGLFAAMLVVYRRIGEDIRSM LVWMAVNFLMPFLVGGIAWQAHVGGFIVGGVFTWLLISGVHALRGKSLTFRTMVYGAVVL ALIVAGVLVCNLSNPALTYIM >gi|197324945|gb|DS990229.1| GENE 16 12715 - 13338 259 207 aa, chain + ## HITS:1 COG:AGc3822 KEGG:ns NR:ns ## COG: AGc3822 COG2801 # Protein_GI_number: 15889390 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 34 101 409 476 512 89 57.0 5e-18 MSAKRVMRLMARHGLVPVSRSARRYSSYRGEIGEAPVIHSDRGCHYRWPEWIRICKGHGL TRSMSAKGCSPGNAAVEGFFGHLKQEFFHKRDFTCVTVDGFADDARRVHDMVPRRTHQDR VRDEHHGQAHQAGARRLNTCDNLPDNHTDNEVQQNVATPELVMGLLWGGRGTGEWLGVEA SHQCELHACSFPHDVENFVDNLGISWV >gi|197324945|gb|DS990229.1| GENE 17 13586 - 14887 950 433 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0096 NR:ns ## KEGG: BBPR_0096 # Name: not_defined # Def: methyltransferase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 433 10 442 442 842 99.0 0 MDISSQTSRFIAAHRNQDVRDLALSAKRVDGLDLPFALDQIAGWQTACRKLPQWAETDGI VYPPHISMEQCSSQFAAQYKAGIARRVAGAGGAMVDLTGGFGVDCSYIARGFSRAVYVER QPHLCELAAHNFRALGLPHMDVINGDAEDWLRGVVDSRAASADSAAVDSATAVPIALIYL DPARRDAHGGRTYAIADCTPDVLALKDRLLAVSPHVMVKLSPMLDWRKTVADFNGSVGEV HIVSTGNECKELLLVLDRGSHDAVRVICVNDGDVFGYVHDMKTGADSDGVVLAAAGEKGS QGGSAEPPHAAPEQPRYLYEPNASLMKGGCFALLEDHYGMRQIGPNSHLLISGTPAPQFP GRGFVIETIAGMGKKELKRALAGVDRANIAVRNFPLTAVQLRRKLKLADGGDVYLFGTTS VDGRHVIVRTVKQ >gi|197324945|gb|DS990229.1| GENE 18 15012 - 15467 649 151 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0131 NR:ns ## KEGG: BBIF_0131 # Name: not_defined # Def: septation inhibitor protein # Organism: B.bifidum # Pathway: not_defined # 6 151 1 151 151 265 96.0 6e-70 METTLMADTELHETDSEDQKDWQAETDADVKDTDTNETDEADDDYGVSMDKVQAVLNATA DKSEMTPQMQRMMSRQAENTRRVEETIKGTKSNPRWFVPLFCALMIIGLIWAVVYYLSPN GTWPIPGIGAWNLAIAFAIIMVGFIMTMWWR >gi|197324945|gb|DS990229.1| GENE 19 15530 - 16318 798 262 aa, chain + ## HITS:1 COG:MT0015 KEGG:ns NR:ns ## COG: MT0015 COG3879 # Protein_GI_number: 15839386 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 102 238 107 240 262 113 48.0 3e-25 MARHTSRHAARRTWLGGFAVCLIVAFSGYLLVTNVRVNRTATVTSDTADLVEQRVEHVDQ LQKDITDLSAQINTLKDFANNSGSSEQPSGTSDPKPSDTEDAGSGTILPAVHGPGITVTL NDSPLWENMVDSSGSAANINDYVVHQEDVEAVVNALWAGGAESMMIMDQRVLFNSAVICQ GNVLLLQGKKYSPPFTVSAIGPADAMIRALDDSNAVKLYKEYVSAFGLGWKVEKKDDLVF GQSAATLQPLRYASVVKDGSKE >gi|197324945|gb|DS990229.1| GENE 20 16315 - 17544 1307 409 aa, chain + ## HITS:1 COG:Cgl2874 KEGG:ns NR:ns ## COG: Cgl2874 COG3764 # Protein_GI_number: 19554124 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Corynebacterium glutamicum # 61 262 2 228 255 108 31.0 2e-23 MKHSRNSQQIQGDFQDFEAPAPAEPEYAGEVTMALPPVPMPDPNARRGLAQPAAKRSVLW SVLGILGEVLMTLAAVCALYVVWQMWWTGVQSEHTQVETRQSASWSDPAGGDSSKVAKAQ SGDVPVQPTSASDGELIAQVYVPRFGQGWVRNVVEGTDEAELSLHGLGHYPSTQMPGSVG NFAVAGHRNGYGRPLGDVDLLQEGDAIIVRTKDYWYVYKYTTHKIVTPEHSEVIAANPED LNTPPSKRMITLTTCEPKYTTATHRWISYGELSYWAKVSDGVPQELATSSNSAKVAFSSS NTSQSFVSKLGTLQPIVLWALVAYLVLYIAALVAWRYPVLRKIRAGKRRRPDASIYGWLL RHQPGPLVIRWALLILLLFIVSVALIQWACPWAASNIPILQSMSNYAVD >gi|197324945|gb|DS990229.1| GENE 21 17640 - 18284 682 214 aa, chain + ## HITS:1 COG:ML0015 KEGG:ns NR:ns ## COG: ML0015 COG0512 # Protein_GI_number: 15826878 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component II # Organism: Mycobacterium leprae # 6 197 2 193 232 204 49.0 8e-53 MTDSARIVVVDNYDSFVYTIVGYLKTLGATVDVVRNDAIDPSDASVLDEYDGVLISPGPG APADSGASEDVIRLCAKLGKPMFGVCLGLQALAEVFGCTVSHAPTIMHGKTSLVEHIDDE IFAGVANPMTATRYHSLAVEPDTVPDDLVVTAWTKDDHIVQGIKHRSLPMYAVQFHPESV MTQDGYRLLANWLAVCGQTNAVAKSIGLQPKVNR >gi|197324945|gb|DS990229.1| GENE 22 18512 - 20557 2720 681 aa, chain - ## HITS:1 COG:Rv0014c_1 KEGG:ns NR:ns ## COG: Rv0014c_1 COG0515 # Protein_GI_number: 15607156 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 2 288 4 284 428 293 54.0 1e-78 MPASLANGRYQLGQLVGRGGMAEVRVALDTRLGRTVAIKIMRADLANDKIFLSRFRREAH SVAQMNNPNIVNIYDSGEETVMTDSGGTERLPYLVMEFVKGQTLRDVIKANGPLSQRDAE QVMLGVLNALEYSHHMGIVHRDIKPGNIMISEQGVVKVMDFGIARALDDSAATMTQSQGV VGTAQYLSPEQARGETVDMRSDLYSAGCVLYEMLTGRPPFTGDSAVAIAYQHVSEVATPP STLVPGLPRMWDSICAKAMAKDRQNRYATAAEFKNDILTFMNGGVPVAAAFNPLTDLANV KARKAAEQQDGGATVPMSAVGAGQPTQAYNPATGQFEMVPPAQNPNEALAVKSRAEQRAE AARQKRKKKIIIASIISGVVLLAIIFGVIYTMSRKSATEMGTVPTITATMTKAQAKEKVT SAGFNFVEMQDSDSGEPAGTFTKQSPKGDTQAVKGSDVKVWFSVGPKSVTVPDLSDYTQE DARNALEKLGFKVSSVTKTADSATIEKDKVVSTDPASGTSQPKGTTITLYISSGMTKVPD GLVGQPKDTVLDKLSSMKFLPVVEQEASDKVEKGSVTRVSPGSGELVLQGSQITVYVSTG KPQVSVPNLLGNTIAKAKATLGSDFTLKVTGDATDDAVIETQDPAAGTQVDKGSTISVTA KKPTTEDPDNNGNGGTTTGGN >gi|197324945|gb|DS990229.1| GENE 23 20572 - 21555 1176 327 aa, chain - ## HITS:1 COG:Cgl0042 KEGG:ns NR:ns ## COG: Cgl0042 COG0515 # Protein_GI_number: 19551292 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Corynebacterium glutamicum # 7 281 14 295 469 205 42.0 9e-53 MKLVEGQLIHRRYRLDRRLAQGGMGEVWKGHDIQLNRPVAIKALRDDQGNVEAKLHRLRA EAHNSANLAHPNIAALFEYYEHDSIGFLIMEYVPSDSLADIYRDRGTLPATELLPILIQT ARGLFVAHSHGVIHRDVKPANIMVSTTGEVKITDFGVSYSTNQEQITQDGMVVGTAQYIS PEQAQGKQATPQSDIYSLGVVAYEGLCGHRPFTGTTPVDIAAAHVNDPVPPLPDSIDVQL RQFVMSMLSKDPLDRPKDALTVSRTLSRIERRLLDQETAQMDETIMGLGGRMPRRVSSTP RTATLITMNRNQFGGHTATTDPKNREE >gi|197324945|gb|DS990229.1| GENE 24 21552 - 23018 2090 488 aa, chain - ## HITS:1 COG:ML0018 KEGG:ns NR:ns ## COG: ML0018 COG0768 # Protein_GI_number: 15826881 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 1 487 1 489 492 277 36.0 3e-74 MNKYLRQLFTAVIALFVVLGMSTTIITAIRANSLSSDPRNARALYQEYGAPRGAILASDG TILAQSTPVNDVFSYQRSYTNGPVYAPVTGFFSVTQRGDRGIESSRNKLLSGKADALFWD QLKSLFTGVENKGASIETSINPKLQQLAYQQLGSNDGAAVVIEVKTGRILTLASAPSYDP NALATHDTKKATANYSKLAAQANSPMINRATSQLYPPGSTFKTIVAATALESGDYDTDTQ IPAGASYTLPGTSTNLTNTTTAANGIDGKITLQDALTYSSNTAFAQLGVKLGQDKIAEQA KKLGYGSSITIDGTSSSGRPMKSVAAKFPDTLSDDKVALASIGQGDVLSTPLQNAMVAAA IANDGKLMRPTLVDRVRASDLSTLSEATPEVMSTAFSSSTASKLNQMMQSVVEHDAPSLQ LSGIKVAAKTGTAQIGSSNQTNDAWVIGFAPADNPKIAVSVVIHNVNQYGVEAAGPIMRS LMEEALKQ >gi|197324945|gb|DS990229.1| GENE 25 23015 - 24493 1839 492 aa, chain - ## HITS:1 COG:MT0020 KEGG:ns NR:ns ## COG: MT0020 COG0772 # Protein_GI_number: 15839391 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 3 430 14 447 469 315 42.0 1e-85 MIPIRLRQASLLLFAMLISVVAFYQMFLRVYGHFPANYIGLLAVVGALFLVLWGLLLRFK PYASQAILPCVLMLTAIGVVMIARIDKSGNSSVGSRQLIWLCIALTLCGILVAVMRDYRV LRKYSYVNMVIGLILLLSPMIPGLGRNINGAKIWIRIGGYSLQPAEFAKLFLAFFFAAYL FDHRDQLAVGGKKVLGLQLPRIKDLGPIIMVWLISMGVLIMQRDLGTSLMFFAMFVAMLY AATGRRSWIVIGFIAFAVGAVAAASVFSHVGQRVDSWLHPFSDEQYNRIGGSWQLVTGIF GMASGGMTGTGLGHGQPGLTTFANSDFIYSSVGEELGLTGLMAVLVLYLLIIASGFITAM KIKDGFGKLLASGLVFTMAFQVFTVVGGITLVIPLTGMTMPYMAAGGSSLIANYLLAALL MIISNAANRPEPDTLSDTFQYEALAVLRDRELKERTDKESAPEREPQAERPPEPRHAAAN NQTTEIIEAGAR >gi|197324945|gb|DS990229.1| GENE 26 24490 - 26148 1891 552 aa, chain - ## HITS:1 COG:ML0020_1 KEGG:ns NR:ns ## COG: ML0020_1 COG0631 # Protein_GI_number: 15826883 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mycobacterium leprae # 9 247 2 234 237 193 46.0 8e-49 MPNSVASQTLFLYSTTVSDVGTVRSNNQDSAFAGEHLIAICDGMGGHAGGDTASTIAIRS LAHIEHDDVNGDVSTVARMMETSVMAAHDAIVGKAKRERKLAGMGTTMTAVALVAGYWVL AHIGDSRAYLLRDGRLTRMTQDHSYVQHLIDTGRISPAEARNHPQRNVVMRVLGDFDIDP HPDIAIRAAHPTDRWMLCSDGLCGVLEDSTIEQTLTAYSDQEECAQQLVSMALKAGSTDN VTAVIADATLALDADAFDLPHQTPLVAGAASASLEPIADILNEPVATAPMLRDANASPAQ RAAALIQSQPASQPSPRVAQPSAVREENGERANPDTGEIPVIQKRDGHVTDDPNDPDVAK AIHHERQTQRKETRKRGRRNRLIAILIVIAALALATGGAFGAYRWSQTKYFIGNADGVVA VYQGVNTNVFGLALSHEVKRTNIDIDSLPQAWRDQLQDGITFNSYDEAIQHVQVIRQEKS NFNDNSNTSKSSGDAGNGTSDSSDSSDSSGSNGTDGDSSAGSSQTDGGTAAGTAGDTGTD ASSTGTDGGDAQ >gi|197324945|gb|DS990229.1| GENE 27 26155 - 26697 448 180 aa, chain - ## HITS:1 COG:MT0022 KEGG:ns NR:ns ## COG: MT0022 COG1716 # Protein_GI_number: 15839393 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 1 180 1 154 155 90 32.0 2e-18 MTELTFAILKYGFLILLWVFVWLAVRSLHKDIEAFSPQPSRARRRRDKRAMKSSDGPAPS GPAAAQTAPVTPPRQSQQRTPQSGPTLLVIIDGPKAGASVPLTSESITLGRAASNTVVLD DEFVSSHHARIYKDPASGQWAIEDLGSTNGTIVNQQRLNMPMLLPPRMPVRIGATTFELR >gi|197324945|gb|DS990229.1| GENE 28 26725 - 27426 1076 233 aa, chain - ## HITS:1 COG:ML2076 KEGG:ns NR:ns ## COG: ML2076 COG1716 # Protein_GI_number: 15828122 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium leprae # 146 233 67 154 162 60 37.0 3e-09 MSVLDRFEKSVEGAVNGVFSKFGSKDLKPVDLSSALEREIDAEAMPVGRDRTVAPNEYRF KLSTADFDRIEQWGSEVLANELADNLTQYAKSQHYAFVGPVMVIFEEDLDLPKGSFNLSS ESVQGNAVPVTTTDQAEDHPMLDINGNPYLLTESKTVIGRGSGCDIVIDDPGISRKHLEI DLTPNGVIARDLGSTNGTYVEGHQVPAATLLDGNTITIGRTRILFWASSREQE >gi|197324945|gb|DS990229.1| GENE 29 27404 - 27667 99 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPTTVATALGKPRRQPSPLPPHDRPAGWRIRRTASVQIGLTPHNAVSEVEILRSNRLFPQ KSQLTSPLTYRMGKDIERDHHERSRPF >gi|197324945|gb|DS990229.1| GENE 30 27675 - 30197 2996 840 aa, chain + ## HITS:1 COG:CC2154 KEGG:ns NR:ns ## COG: CC2154 COG1506 # Protein_GI_number: 16126393 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases # Organism: Caulobacter vibrioides # 34 798 48 694 738 164 25.0 7e-40 MTTLHDAIGDFPRHKAQTLRFSCGAPRSATAIGDGSRALFLRSDGPEDLVTSLWLSVFDA DGTHREVLLADPRVLLADADDEDVPAEEKVRRERAREGGSGIVSYSVDAAGRRVVFTING QLFLTEIAEDGSGRTRMLAADGIAAGEGATPVLNPRISPDGRHVAYTTGEHLMLVDIAPQ WPSDSRHDDATDDDCDGQPAPHAHGHRCGDEESGAPYDPSADKLSTLWSVYPDDDADENT WKIGLAEFVAGEEMDRYDGFWWGPDSRHIIFETFNAAPEPMWYISDPANPQTPASGRRYA RALTSNADVRLTLAELAYDGHDEYAGLGIQQISWNRKDYEYVAAVHWSAGHEPLLLVQNR RQTRDQVLSVHLGSEASAGSAPVGSTTVLEEHANDQWLDIIQGTPVFTPDGRLVCALNDM DADTNRLTVDGRPFTPAGWQVREVLDVTDEDVLAVVQRTPELDGYEAPDGLSPWRGNADG HDARSFDVVSFDYDGNVLPMTARPGSWSASRCGEGLVISGRDMDSAKSVMSHSFTMRPVD GGAAPENDGDGSAAMSTLVCPIDNHAAEPGFAPNVRFARLGEHRLYTAIIAPSADSPYAK ADRLPVLLKPYGGPGFQQVVFNQAYYWDAQWWADQGFLVVTADGRGTTGRGPRWDREIFE NMKDVTLADQVEAVHALAQAVEELNRGTAQDGDASRIPAPDLDKVCMIGWSYGGFLSALA VLDAPDVVKAACAGAPPTDWTLYDTHYTERYLGLDPAAYERNSIIADAPKLARPLMLIHG FADDNVTIAHSLRLSQALMAAGRPHTFLPLTGITHMTNDPVVAENLLTLQRDFLRDALDL >gi|197324945|gb|DS990229.1| GENE 31 30461 - 33247 3567 928 aa, chain + ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 3 679 15 676 709 263 28.0 1e-69 MRILRNPVAVVVTLGVAIIPSLYAWFNILANWDPYSSTGNLQVAVANEDKGTTSDLVGRL DAGKQVVSQLKKNDRLGWTFVSADKAVEGVQSGEYYAAIVLPKDFSASLINSITGSSDKP NIIYYVNEKKNAIAPKITDTGATTIDSQINATFVSTVSKTLVQTMTKEGGKLSQSADGTR TSVVNDLNGLIEQLNDIDSSLGRMGGTFDDAKKGIKQAKSTVASLKRQISSAQKAAKQSQ KLLTQVQGSAQSFSSSLAGAFDNGSVQLSGIGVSVNNAAGDALSAFNTAQGSIDDITNVL QKPIDGAATLSSDLKDAMNKAGIGRDTAIGKQIWQQIDALDKTVNTQQSQLDAFHKDTSQ FISSGKSAATSLSDATSTATGSGIGILNRARTTLTGTVTPNLTAGLSNFATLSGTIDGTL SSLSSTLGQSDSLFDELSDTLSQAKTTVAGTQKSLADLTDSVSGVRTDIAALGSSATYQK IKQALNIDGDSFGEFMGTPVKLSTKSVYPMDNYGSAVTPFYTNLALWVGGFVLIAIYKLE VDRERLGDVTASQAYLGRWMLFVVVGFLQALIVMIGDLVLGIQCQRPVLFVLAGLFCSFV YINIIYALAVAFRHIGKAVAVILVIVQIPGASGLYPIEMMPDFFRELHPWLPFTYGINAM RGPIAGLYGNHYWIDMLHLFLYLPVALFIGLVVRRYALNLNALFDRRLAETDLMMTEHNA MVNESVSFSSILNEFSNTEELRKVIRRRAKRFFGRYPRLIRAGLALLIVLPFVFLILLFV IPNKVAMLTTWILSIIIIDAFLIVVEYMRDRYARQLGVSAMSADAFRDAVLRGYTHRHLT FRTSGRSPRRHAAVSKAARDDGDAGAAGDGDIGELGELDGLDWPAQPISGNDDAEGGNNG NEESAGETTGHIPPAGHMPFAGQEDETR >gi|197324945|gb|DS990229.1| GENE 32 33244 - 35571 3135 775 aa, chain + ## HITS:1 COG:CAC2583 KEGG:ns NR:ns ## COG: CAC2583 COG1511 # Protein_GI_number: 15895843 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 1 761 1 696 709 281 26.0 4e-75 MKNIWRIFTRDVCHATRNVIAIIVAMGLIIVPALYAWYNIAASWDPYGNTKSLKVAVANV DSGYKSDLIPVRVNIGETVVSSLRANHDLDWQFVDRDTAIDGVHSGEYYAALIIPKQFSA DMMTLFSPEMKHAELEYYLNEKINPIAPHITDQGASTVATTIDQTFAKTLAQVALDLVSS LLKFAQSPQMSEYVSNATKHISSISSQLKSAASQADSYASLMGATGKIISSTDRLLGSTG SSASDAKEALKQGTAGVKSLDEALAGVSTSMSSSLSDAAGAYDTISKQVDAAFSDMGSQS SQITDKLTTLQRNIQSQADTFGTYAEALRSLADAAHLQAVKDALNNAAQQAQNTQNELQK VADSISDASKKITDGTASADDTRKSLKKQIAAAKQSITDMANTYDTTIKPQLDELGKSMS DVVKQSGSVIDGLAATATSMSGLSGDITGSLSDVQSSLGDAATTLNASAEKLDSLNKQLT AVVGGSGIPDLSQITSADPDSIATLLSAPVSVNRIALYPVANYGSAMTPFYTVLSIWVGA IILVAMMKVSVSDREKAKVLGLGETLPMGETMGVKEAVIAGRTAGPGAMLDVLRKPRPES PGNARRFGLHPYQEYFGRYAIFGAMALLQGTLVCLGDMFFLGVQCEHPLQFLMVGWLCAL VFSLLIYTLTVSFGDIGKAIAVVLLVMQVAGSGGTFPIETLPPFFQTICKWLLFPYGVDA MHSAMAGSFGNEYWVSMGKLALFILPALLLGLVLRKPVMRLNDWIIRNLESTKVM >gi|197324945|gb|DS990229.1| GENE 33 35725 - 36144 396 139 aa, chain + ## HITS:1 COG:CAC2246 KEGG:ns NR:ns ## COG: CAC2246 COG2267 # Protein_GI_number: 15895514 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Clostridium acetobutylicum # 72 135 91 154 363 62 45.0 3e-10 MQVKLIDENRYADEMREMVLPALATCRSEGWMAPADDDGLPPLQRAGKLHYVCYDAAKFD RLGEDGAAATFRGAVVISHGFTEFAAKYAEMVWYFLLAGYSVCVFEHRGHGYSARDVDNS SLVWIDDWRRYVADLALAS >gi|197324945|gb|DS990229.1| GENE 34 36168 - 36800 667 210 aa, chain + ## HITS:1 COG:CAC2246 KEGG:ns NR:ns ## COG: CAC2246 COG2267 # Protein_GI_number: 15895514 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Clostridium acetobutylicum # 8 206 168 363 363 105 31.0 6e-23 MGKDYADGRPLNLYCHSMGGGIGASVLETHPTLFDKAVLSCPMIAPVTGMPNWLASVLAG AMCRLGLGRHMVFGQSEFTPELDMADYEGASEARVRWFQQQRIDDPHQRTYAATFAWVRQ ALRLSRAVQRPEACDNVETPVLLFQAGRDVWVLNEPQNRFAQEVNSDGGNVRVVRIENSL HEIFSMPNAVLGPYLERILGFFGSSEMPTF >gi|197324945|gb|DS990229.1| GENE 35 36836 - 37810 1177 324 aa, chain + ## HITS:1 COG:SP1447 KEGG:ns NR:ns ## COG: SP1447 COG0697 # Protein_GI_number: 15901297 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Streptococcus pneumoniae TIGR4 # 38 323 5 289 298 142 36.0 1e-33 MKDVVKHAVKHIVKQSKTPAAESAPETASFERTPKAMLLGAVLVLLGGVLWGINATVSKL LMADYHADPLWIACVRELAAGALFLACAGVRTPKLLAGAVRDRRSYPMLLLAALTCVLFV QVSYLSAIDWTNSGTATVLQTLNLLFVLAYVCIRGRRWPGLRESIGVALAFAGTVLIATG GDLSTLKLPLVGLLWGLADAACTAALSILPAKLIARWGNLAVNGIMFVISGLVLMPFVRP WASAPQLDWFGVLLMVFTVVGGTFGAYWLFLAGVMRIGSMRGTMLGTSEPIAATISAVLW AGAVFTPTDFVGFVMIIVMVFLVR >gi|197324945|gb|DS990229.1| GENE 36 38074 - 38829 573 251 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0115 NR:ns ## KEGG: BBPR_0115 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 251 1 251 251 457 98.0 1e-127 MHESSYKAGSGRRYQAGQGRPGRVPRILATVVAVIALIVGGLALVRAVAPHAIAKLTAVS VRSLAIGAAVLIVVAIILIVMARVASRRGNRVSVRGTAGGAIVAVVFAIMLTVAALLISN LFKDGIVKPSSPDKSPAQSAQNMQQSVEEAGIYCESGWSELSSQGYPGVTDVEICLKPRI AYVTFDNEFAADMYRAPLRYKIIEMFDEQANSTISKGDWRLLSGKKWSVFSYRTIIDKLQ KQWGGTVEKIE >gi|197324945|gb|DS990229.1| GENE 37 38881 - 39408 489 175 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0116 NR:ns ## KEGG: BBPR_0116 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 10 175 1 166 166 254 98.0 8e-67 MLREGYDGNVNDVSNQPAAKTPAESSSESTESSRFTRGDSTLTTVGRIVMVYAVVQLLMA ISALASLSGLDPAASVQVIGGWRIGLRVAWFTLGLVFAGNCVLYLLGGWLGRRAGADTSK SRPFMALMWLSVVTTLIGLLAARATTSGWEAWFSLLIAVILSLYATKVVKRSARI >gi|197324945|gb|DS990229.1| GENE 38 39510 - 40514 1099 334 aa, chain + ## HITS:1 COG:BMEII0819 KEGG:ns NR:ns ## COG: BMEII0819 COG0229 # Protein_GI_number: 17989164 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Conserved domain frequently associated with peptide methionine sulfoxide reductase # Organism: Brucella melitensis # 188 333 2 146 146 170 58.0 4e-42 MSEQNNHDTTNNSRRNPAAADGPSMQTAYFAGGCFWGLERYFQNVDGVTDTTVGYAQSKV ESPSYEQVCAGVTDAAETVKVVFDPAQVTLRTLTLLFLEVIDPFSVDRQGEDSGRQYRTG MFFTDATQQSVYIAALEQLVDRQPARPAVLVEPLRNFYPAEAHHQDYLIANPGGFCHIPL AAIANVKRRQKYVEKIWDLTLEQFAVTQCAATERPFVNAYDEEFEPGIYVDVVSGEPLFS SRDKFDSGCGWPAFSKPIADELLTEHADHRIPGRDRIEVRTADTQIHLGHVFDDGPANRG GLRYCMNSAALRFVPRSRMEAEGYGDWLPAVDGE >gi|197324945|gb|DS990229.1| GENE 39 40519 - 41019 353 166 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0118 NR:ns ## KEGG: BBPR_0118 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 166 1 166 166 251 95.0 6e-66 MRESTLIAKSSIRRASPQLRLRTGLAWGIAVAVDAWLVWLKWWRLPNTIREIIRMFPETA FLHDPAMLWQFVAASCLQVVVIASLYLAVARIPARWVPWLRIATLASFAAICIGSNALVI AHGFSTPGFVYSLGLAAAASLIATVALVHGQWRRWLARRKRRATAL >gi|197324945|gb|DS990229.1| GENE 40 40862 - 41221 77 119 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MISRMVFGRRHHLSHTSQASTATAMPHANPVRRRSCGDARRMLLLAMSVDSLIVGSFEGE SGISHIVKARLPRIAAKPHTNGQTFRGKGQLSAFQGVDFVFAKRLSTFRGVAKTRCPGY >gi|197324945|gb|DS990229.1| GENE 41 41369 - 44554 3143 1061 aa, chain - ## HITS:1 COG:Cgl1126_2 KEGG:ns NR:ns ## COG: Cgl1126_2 COG1061 # Protein_GI_number: 19552376 # Func_class: K Transcription; L Replication, recombination and repair # Function: DNA or RNA helicases of superfamily II # Organism: Corynebacterium glutamicum # 246 1059 30 781 789 457 35.0 1e-128 MNTRESLNPQSDLKTDATHSVLESVISGLIEPRQDAPESYKPTLISNRPGDLTMHDEISD ALTNSDSFDISVAFVSPDAILSLFEDFRSHHANAPEQVSRLITSTKNHFNDPRAFWELLH LQRTAGVDVRVWAGSDSSVSVAQGQPFHPKGYVFSRRMRNGTPYYDLFVGSSNLTGAALN TQREWNLKVSSLANGELVAQVRDEIDSQIADSKPLTEEWIKQYEEDFKKYAPPRRDILKS LEGREIQPNAMQKEALASLKKLREQGEHRAIIVSATGTGKTYLSAFDVREYRPRRMLYIA QQQMILKAAMKSYQKVLGCPQSELGLYTGTSKQQDRRYVFATVQTMRQPEALAQFASDEF DYVLVDEVHHAGAEGYQRVIDHFRDADFMLGMTATPERTDGINIFELFGHNIAYEIRLQK ALDENMLCPFHYYGVAEYLGSDEDADQDMHRLDVSQGLDAKESKQLKYEIGQLATEQRVR YIIDKLQEYGQFGIPVTGLVFCSRQEEAHELSRLFNEHWNQQAERPYRTAAVTSKDVNGK PLSQEKRDEYVRRLTDGELDYLFTVDMFNEGVDIPAVNQIVMLRSTESSIIFTQQLGRGL RKFPYKDSVVVIDFIGNYNNNYLIPVALYGNTGDRDRARKNLQRKSIGLSSISFDPIAKE RVLKSLDTADWSEMKKLSEQYRQVRYELGRIPMLMDIYAYDPSLPYTLATKRSNYLDFVR SREKSLGGGKNHETTFEDQLDPVTDTEDAVLKMATELLLPGLRPHELAILERLCRLAEER LDDETPVSWNASAPISRDALLDAICADFPQADLSDAQFDSAISVLDYSYFTGPNRKRFGN LPLVETLADDDQGEPAYRLSSGFVNMLAENRTFRIFLADTLRTGLANCRDLFQEAQSRRR AFDHAFLYERKYSMADVMRLCGWKKENTPQNVGGYLLDKDTNTMPIFVKYAASQYEDEFL NAQEMKYFSKNGRTPQSPEFQWALSGVGPDWGRTHFVPLFVMRKAEEADGKYYYVGHVAA FDNPTLTTKPNAAGDGTVKVTLSTLRLARPLDPELYRHLVG >gi|197324945|gb|DS990229.1| GENE 42 44551 - 45000 281 149 aa, chain - ## HITS:1 COG:SA2278 KEGG:ns NR:ns ## COG: SA2278 COG0494 # Protein_GI_number: 15928069 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Staphylococcus aureus N315 # 6 129 3 126 130 135 53.0 3e-32 MDSHAKIINVVGAAIVRDGAVLCAQRGPGKSLAGYWEFPGGKIEPYETARQALHREIEEE LLCEIEVADEVCTSEYAYDFGTVRLITFICHLIDGMPRLTEHTDIRWLDPSAMPQLNWAP VDRTAVGIIAGMRFLTQTTSGTSEEPSRP >gi|197324945|gb|DS990229.1| GENE 43 45217 - 45615 225 132 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0121 NR:ns ## KEGG: BBPR_0121 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 132 14 145 145 192 96.0 3e-48 MISADAITSRTFTTVRFKEGYSAREVDDFLDEIVDRMTTGDHSLARRIKEKTFSNVRFRE GYDIDEVDDFLDEVARGLEGDAGASTGASTASAAAAIPDPHETVAPEPGTSYTSDANLAA PSSDGDAAQLPW >gi|197324945|gb|DS990229.1| GENE 44 45688 - 46008 135 106 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139367|ref|ZP_07801560.1| ## NR: gi|313139367|ref|ZP_07801560.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 106 1 106 106 164 100.0 1e-39 MEAALKPAAPSAVTVVITSCNQGALIREAVESALAQTIRPDCAIVVDDGPDDPASIAVLD GLAELGAPGRDGTAPAGQFAPVLEKTSLYQFPSCPPTGRDDSPARR >gi|197324945|gb|DS990229.1| GENE 45 46051 - 46383 525 110 aa, chain + ## HITS:1 COG:lin0240 KEGG:ns NR:ns ## COG: lin0240 COG0393 # Protein_GI_number: 16799317 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 2 104 1 103 110 139 73.0 2e-33 MILVTTTPSVDGYVINSYQGIVFGEVISGVNMFKDIGAGLRNMFGGRSQGYEEELMKARN EAILEMQQRAEAMGAHAVVGVDIDYEVLGADNGMLMVTASGTAVQLARRG >gi|197324945|gb|DS990229.1| GENE 46 46505 - 47323 792 272 aa, chain + ## HITS:1 COG:CAC2936 KEGG:ns NR:ns ## COG: CAC2936 COG0596 # Protein_GI_number: 15896189 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Clostridium acetobutylicum # 20 271 24 268 275 137 34.0 2e-32 MTQPQAYAVTEGDGLPVVFVHGMGVDHRSLMLLDEAFLCPESGAAATRLLKRIYLDLPGF GRTPALPARACGLPEMADWLQSAIDDLVGAGEPFALVGNSMGGALAREMVARESSRVRGL ALIAPVVDPRRTRRHVAEHVITEPNPTLIHALPQDQTFDFVTMGVNQSFAAWRRYQSYIL PGIRLCDRDACARLDARYWLNDDPERVFGTYTGPTLFVTGRRDQIVGFEDQRALLSHYPD ATFVTLDDAGHNAHIDQPEAVIHLLREWAGRL >gi|197324945|gb|DS990229.1| GENE 47 47341 - 47817 258 158 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0156 NR:ns ## KEGG: BBIF_0156 # Name: not_defined # Def: acetyltransferase (GNAT) family # Organism: B.bifidum # Pathway: not_defined # 1 158 8 165 165 306 98.0 2e-82 MPGAAPRMTRATLAPMTGKIGAYDHLPETARAIREQVFIRERDWRPEFDEWDAVAVHLLA FDGNRTVATCRFYADPDHSDQPGRYVIARLAVLPDAQGRGIGSQLLADAERRIAHSGGTI AAVHSENDHYKFYERRGYQLTDELYDDGRHGWLIKALI >gi|197324945|gb|DS990229.1| GENE 48 48456 - 49757 1322 433 aa, chain - ## HITS:1 COG:Cgl0233 KEGG:ns NR:ns ## COG: Cgl0233 COG0343 # Protein_GI_number: 19551483 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Queuine/archaeosine tRNA-ribosyltransferase # Organism: Corynebacterium glutamicum # 20 429 2 415 418 469 54.0 1e-132 MTSFLEHPRGAADGRPGDRSAFFFETLTQLPDSADGKGRGGRRYGRAGIIHTPHGDIRTP AFVPVATQAAMKAVLPETMRELGAQCLLSNAFHLFERPGQDVLDAAGGLARFMNWDGPTF TDSGGFQVLSLGAGFKKTLAMDVTGMKSDDVIAAGKERLAFVDEDGVTFKSPLNGDRHRF SAEISMGIQHKIGADIMFAFDELTTLMNTRSYQEASVERTYRWAQRCVAEHQRLTEERLG KPYQALYGVVQGANYEDLRRHAAEQIASLDFDGVGIGGAIEKRIIADTCAWICDAMPESR PRHVLGIASVDDIFACVENGGDTFDCVAPARCARNGAIFTRNGRYNVKRAQHKFDFGPLE EGCDCYTCQHYTRAYVDHLLRAREFNGFTLATIHNERFFVKLLDDIRASIDGGYFDEFRD ESLARFYANGPRG >gi|197324945|gb|DS990229.1| GENE 49 49968 - 50099 65 43 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MITVDNSFSPSNQRSGNIQSRYLYSYVELGGALAHRYEPQPAC >gi|197324945|gb|DS990229.1| GENE 50 50126 - 52048 2810 640 aa, chain + ## HITS:1 COG:TM0571 KEGG:ns NR:ns ## COG: TM0571 COG0265 # Protein_GI_number: 15643337 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain # Organism: Thermotoga maritima # 289 567 81 349 459 204 44.0 6e-52 MADNNNGYWPADNGGQPEQPQNDNLQQDAPTTSDAQDQQFAQEPLGAPQEAPAQNDDAQQ PQPEAQDTRPTQPLAPVAPTSEQAQASEPTQPLPPQPTQPTQPLYRPAPEYGAYGPTPTQ PEPQQPQPTQQQNQNTGNGGNPFFNGNPFMTRPTDDASQQNRQNGNTPYGFPFGPQGPNG GQDQGMAQPEDGGNASRGGSSAASHIVTAVVAALVAAALCLGVGYFALTYGWVSTPTTTS LTNVQSNKSGTGSATAKTGEAADWKTVASEVSGSVVSIQAALSNGTAKGSGAIVSAKGYI VTNNHVISGAQQIQVTLSNGQMYTAQVVGTDTTTDLAVIKLDNPPSDLKAVEFADSDKLA VGEDVMAIGNPLGYDDTATTGIVSALNRPVTVTDDSGSDIVTNAVQIDAAINPGNSGGPT FNAAGQVIGINSSIASTATSSNSAGSIGIGFAIPSNLVKRVANEIIKDGKVKHVALGVTI TTGTVEADGVTRAGAKVTAGTSGSAVVSGSPADKAGLKVGDVIVAYDGNAVSSTYSLLGY VRASALNDKVTLTIVRGGKTMDVEVTLDKEESAVNGSGSSNSNNNQNNQNNQNGNGQNGN GNGNGNSNNGNSNNGNGNDSNGYGNNDYGNGGFSDPFGLW >gi|197324945|gb|DS990229.1| GENE 51 52427 - 54628 2065 733 aa, chain + ## HITS:1 COG:L96595 KEGG:ns NR:ns ## COG: L96595 COG2217 # Protein_GI_number: 15672077 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 38 729 15 591 593 353 34.0 9e-97 MRKFIYLCSHLCVQVPLLPIAVLTVIPLAVCPSWRPWGAADIPILGNPGVGQWIVIIVVA YTIIDTVRGMIDDLRHGRVGVDLLAVVAIAATVAVQEYWASWAVVLMISSGEAIEEYAQS KAESSLTALMTAAPQTAHVVRRPGVGVAGVNTGDGSDGSSDDRGDGFRKVAALPSSAASG SSDAATSHYDTVAVESVTPGDVLIVLPGETVPVDGELLSGSATLDLSNINGEPVPRGVFA GARVMSGAVNGSTTLTMRAAEAARDSQYQRILALVAAAQDSRPAVVKTADVLAVPFTVLA LAIAAVAWLVSGVPTRFAQVLVLATPCPLLIAAPVAYVAGTGRLAKSGILIKTQDVLENL GRVTHVFFDKTGTLTVKQPQVTRVEMLPGAGTHLNEDHVLMMAGVVETYSVHILAKGIAK AGTEALSRLHRRFEEGQRLCPQPDADWPGHGRDYPVVKHIDEDAGKGISGEVNGHKVRVG RLSFAASSEDGFLPVERIVPGRATTDGDRRSGKQGEGRLADEIRTRFGMLAPDEMASYVS VDGHLIARIVLRDVPRANAKSALARLRGLGVAKLSMLTGDKRSSAAIIASEVGIDDVHAE LFPEDKVAAVTTATVTPSRGVTMMVGDGVNDAPVLAAADIGMAMTDGTSTAASESAQVVI MNDDIAAVPRAIAIARRTKRVMLQAVLAGLALALIGMVAAAFNLIPVVVGAFLQEAIDVV SILWALTALLDRD >gi|197324945|gb|DS990229.1| GENE 52 54799 - 56250 2253 483 aa, chain + ## HITS:1 COG:Cgl2757 KEGG:ns NR:ns ## COG: Cgl2757 COG0493 # Protein_GI_number: 19554007 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Corynebacterium glutamicum # 9 477 5 446 457 351 43.0 2e-96 MTESENNELRIAVIGAGPAGVYSSDIFLRQLKKLGEELGLGTKARIDLFEKLPVPFGLVR YGVAPDHPSIKFIASALEKTLDNPDIHLYCDVEFGKDVTLDDLLARYDAVLFATGAVKDK PLNLPGADLDGVYGAAKFVEWYDGYPTGAREWPLSAENVAVIGGGNVAMDVARELMRNAD DLKAKTDIPDNVYEGIQGNKAKVLHLFIRRGVAQAKFSVQELREMEKLPGVQLIINEDDF ELDDDTIEEAGKDKLTRQMVEELFTIREMAEDMEDDGDVDYEGNPADRKYYVHFNSAPTE ILGKDGKVAGIRVEKTETGADGKMHRTGEFEDYPVEAVYHAIGYKPAEAPGITYDEKGAH LANANGDGRITTEAAGGDVRERLYATGWAKRGPVGLIGSTKSDALMIVTNMLEDLAKAAE GGRVAVDRDPESIDRLLAERGVKPIDFAGWKKVDAFERSEGAKEGREHKKVVEPDQMREL AHA >gi|197324945|gb|DS990229.1| GENE 53 56422 - 57360 1077 312 aa, chain + ## HITS:1 COG:MT0589 KEGG:ns NR:ns ## COG: MT0589 COG0501 # Protein_GI_number: 15839961 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Zn-dependent protease with chaperone function # Organism: Mycobacterium tuberculosis CDC1551 # 10 295 6 285 286 254 51.0 1e-67 MDGKLHVRGHFNGLKTTLLFALMWAIVMLIWWATGGGRGTLGVYIVIGLVSTFSTYWFSD KLAIASMGAHAVTEQEAPALYRIVRELSAKAGKPMPRIYVAPTMSPNAFATGRNERHAAV CCTQGILNILNEREIRGVLGHELMHVYDHDILTSAIASALATVITYLGYSLMYFGGGRSN DRDNSSGVFGLIGVLVSAILVPIGASLIQMAISRTREFDADEDGSRLTGDPEALASALNK ISYGAQTNPMPKTAGTQSVSSMMIANPFSARGFSKLFSTHPPTDERISRLMQMSQEMRNS GIGGGSRPHYLY >gi|197324945|gb|DS990229.1| GENE 54 57872 - 59557 664 561 aa, chain + ## HITS:1 COG:DR2199 KEGG:ns NR:ns ## COG: DR2199 COG2865 # Protein_GI_number: 15807192 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Deinococcus radiodurans # 26 549 33 586 596 170 28.0 6e-42 MAHEYGKETLSKEFKSDRDKGLPDSELVEAVVALANTDGGCVYLGVEDDGTATGVQRKHQ DPVGLSAMIANRTVPPISVRAQLVGDGVTVIQVDVPKSHSVVSTKSGRILRRMMKVDGTP ESVPMYPYEIATRLSDLGKLDYSAQPVPGATREDFDPLERDRLRKIISTYRSSDRNLLEL SDEDLEKSLRLVVSADGNVTPTLTGLLLIGSEESLQRLVPTSEAAFQVLVGTDIKVNNTY RGPLLKTIEQIAESFAPWNPGTELTVGLFSSVVPEFDERAFREALVNAFGHRDYSVLGRV RVLVDDAGLTIANPGGFVEGINVHNLLTAEPHGRNPCLMDALKRTGLAERTGRGIDRIFE GALNYGRPLPDYSRSNGRGVSVLLPRSAPDEAFVELLAEERERSGKSMSLDGLLILDKLK RERRCGFDALSESLDMSDQRLRTVLGQLTESGLVESSGTNARRTYTLGAKVYRRSGKTVE YVRQSGIDRVRYPELIMKLMREQKSVSKNDVMELLHLDENQAYYQLRKLVGEGRAKKVGG GRNVRYEEMQRDDDGISGEQF >gi|197324945|gb|DS990229.1| GENE 55 59860 - 60120 113 86 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFLAQRSWILLVCSHSSGVNMIFLHTLRLRLSRQPIKKHLPAGAGTAHSISHVSGLEASP TMGTGSPGKPSRTCGASTCGHTYVAC >gi|197324945|gb|DS990229.1| GENE 56 60014 - 60334 226 106 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0131 NR:ns ## KEGG: BBPR_0131 # Name: not_defined # Def: mobilization protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 106 1 106 106 203 98.0 2e-51 MGWRDNRRRSVCKKIMFTPEEWEQTRRIHERWARNIPVYRRWGDFARQTLMHGALMNVSV TLASDPEVFKAEPHHIGVNVNQTAHCAGPTGGSCSPPPRTRSTCWQ >gi|197324945|gb|DS990229.1| GENE 57 60445 - 61116 685 223 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0132 NR:ns ## KEGG: BBPR_0132 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 223 1 223 223 466 100.0 1e-130 MNRSIASFEELIDRYADYLSGKGIQFNPQGFPMLQPQMYLDEWPELMVPYRDRKARFVHN PSHTVLCLFTSDMRIYPRLEKALDDIPEYSRYMGAVGSDLTVTSDMDLEWQQAIMLLNQL YLATLAVNGVKIVQNLRCGSPSTITCLSCVPSGVMCATSTLGCANTESELDLLFAEKLFA IRPGKLLLYGKHDPIMERQANVAGVPCRIYPDAHTLYKQLART >gi|197324945|gb|DS990229.1| GENE 58 61113 - 61496 205 127 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0133 NR:ns ## KEGG: BBPR_0133 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 127 1 127 127 264 100.0 7e-70 MKSTYDLIGTFWDGRPADAVAQTVPYDPLMPEAGTPYCLFDINGKRRGIWLSVLFAVRDE ADWERVRASLAGCRQIAVIDDCRPRFQGQAVQQFHQHRLRQVLCLLRCEIPGAHVLVMKF PNVGRAA >gi|197324945|gb|DS990229.1| GENE 59 61511 - 61858 452 115 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0134 NR:ns ## KEGG: BBPR_0134 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 115 3 117 117 226 100.0 3e-58 MELVLVLSLEGLNYYGYIPETFQAKPGQTESFELTEGDEDLLDKDFIGPIDRLCNSLIDP GDVDYLNAEQCKLMLGWLEWRLTEPINPRLETIYRKLVEFANKAIELGTGIVFDL >gi|197324945|gb|DS990229.1| GENE 60 61861 - 62229 443 122 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0135 NR:ns ## KEGG: BBPR_0135 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 122 1 122 122 207 99.0 1e-52 MSDSKQRYSDSSRSYIGNDVPGSMVDQGRYDRSKDRETRWNESWKRQPVDLNDIVSRFTP GAQGRRRGVKYVFENARWRIDADMVAGYLRIYDKRTKKNVKLNGLPGSNKETHFKILKRR EM >gi|197324945|gb|DS990229.1| GENE 61 62428 - 62730 277 100 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0136 NR:ns ## KEGG: BBPR_0136 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 100 5 104 104 180 99.0 2e-44 MRGHLRDSELAEIEANFWAKYAIAPQVLIEELGLTTIEEISQRFGTSLECASNILNQHAN WLRHRHDDEALDASILELYARGLLLERRDEKQADPAQILQ >gi|197324945|gb|DS990229.1| GENE 62 62645 - 62908 143 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSTWGAIAYFAQKFASISASSLSRRWPRMVCPISCNLVKRILPEFSWRLQAMYRLSLPFA LIVNDMPLGQLQSVIKSSKETDGLNAI >gi|197324945|gb|DS990229.1| GENE 63 63041 - 63382 272 113 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0137 NR:ns ## KEGG: BBPR_0137 # Name: not_defined # Def: XRE family transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 113 1 113 113 196 100.0 2e-49 MTAALGDRMRKLMRQHGINQSQLAARAGTTQPNISKYLAGEREPTSSTLANIATALHTTS EFLLGLPESNADTPFGTIKAYCARHGGDLSEAETRELIMTLLTAREQGGHHGI >gi|197324945|gb|DS990229.1| GENE 64 63765 - 65057 1431 430 aa, chain - ## HITS:1 COG:BH1917 KEGG:ns NR:ns ## COG: BH1917 COG0726 # Protein_GI_number: 15614480 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted xylanase/chitin deacetylase # Organism: Bacillus halodurans # 218 417 69 270 276 147 40.0 4e-35 MTKEPQYIEELSFGDSVRRAGKTRGNEYGEYGAGPDNGRRGRGRHRLIAFVAILVILALA GGSVGGWWMWDRHWRQIPITVNGTSMKVSVDMTLGRLLRDNGDFDAHPGNLVDVAGDMIE KHAGKPIVVSINGAAVRRDAIDSTTIPQDGMVMVTSGEDVTEDHTVRKETVPHGESIGIA GGSIQILKQAGKDGVHEYWVGKRSGKHVDKGVTVEPQDTIVVPLNPRPEGKKVIALTFDD GPSKYSGPILDILKEKGVKATFFDVGEECLSFPDAEKRMLEEGHQVASHSNTHPDMPTLS RDALRAEIIAGFSNMKKASGHVTKVLRAPYGAFGKKQWQETSDLIDMNVLWDIDTLDWKR PGAKAIHDAVMTGAHNGAIVLMHDGGGDRSQDVEALPGIIDDLKKQGYEFVTIEQLIKMA GDAGDTGGRG >gi|197324945|gb|DS990229.1| GENE 65 65196 - 66263 1060 355 aa, chain + ## HITS:1 COG:ML0286 KEGG:ns NR:ns ## COG: ML0286 COG0191 # Protein_GI_number: 15827063 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose/tagatose bisphosphate aldolase # Organism: Mycobacterium leprae # 1 354 1 342 345 411 60.0 1e-114 MTIATAERYAEMLDAARRGGYAYPAINVTSSQTLNAALQGFADAESDGIIQVSVGGAAYF SGQGVNDRVTGSLAFAAFAHEVAKRYPHITVALHTDHCAKQYLDGWVRPLLDMEADEVAH GREPMFQSHMWDGSTVPLDENLTIAEQLLDKSVAARTILEIEIGAVGGEEDGHSAEINEK LYSTPADGVKVAQRLGLGERGRYMAAFTFGNVHGSYKPGVVKLRPELLGDIQREAAQAVV DGRIASAAGAVDFPNGKPFALVFHGGSGSRPEEIAEAVRYGVVKMNIDTDTQYAFTRAIA DHVFSNYDAVLKVDGEVGEKKLYDPRSWGREAESAMAARVVEACKQLGSAGKALK >gi|197324945|gb|DS990229.1| GENE 66 66553 - 67839 1756 428 aa, chain + ## HITS:1 COG:Cgl2708 KEGG:ns NR:ns ## COG: Cgl2708 COG0104 # Protein_GI_number: 19553958 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate synthase # Organism: Corynebacterium glutamicum # 1 427 1 427 430 570 62.0 1e-162 MSGIVLIGAQWGDEGKGKATDLIGTKVDYVARFNGGNNAGHSVMVGDQMYALHLLPSGII SPNVTPVIGNGVVVDPEVLFEEIDGLESRGVDCSRLLVSEAAHVIAPYHRTLDKVTERFL GKHKIGTTGRGIGPAYADKINRVGIRVHDLFNAEHLHDKVEASLHQKNQILVKLYNRRAI DVDQTTDELLKLGERLKPYVANTGLILNKALDEGKTVLFEGAQATMLDVDHGTYPFVTSS NPTAGGACTGTGVGPTKITRVVGVSKAYVTRVGEGPFPTELFDESGEWLRQQGHEFGVTT GRPRRCGWFDAVVNRYASQVNGLTDLVLTKLDVLTGLKEIPICVAYDVDGERYDDMPTDQ AAFSAAKPIYETMPGWTEDISQVHEFDELPAACQAYVKRLEDLSNCRISVIGTGPQRDHI ISVHSLLD >gi|197324945|gb|DS990229.1| GENE 67 67914 - 68858 758 314 aa, chain + ## HITS:1 COG:lin2188 KEGG:ns NR:ns ## COG: lin2188 COG0239 # Protein_GI_number: 16801253 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Integral membrane protein possibly involved in chromosome condensation # Organism: Listeria innocua # 106 245 1 128 129 66 28.0 7e-11 MNQSVPFVPSSHDESDGGDAAGAGDIESVSAGSDVADTSAPDSTPSEAHALAADEPAPST QEISASEIEYAAPRPTGLAAAVAPPSIPLAPAKRVQAKFNPLADGMLYLVVFVGGFFGTA IRYGLSLLLPNPAAPSGLLHSFHTATFIANMLACFIFAALSTYMSQAAWIRKRIRQLVSR GVGMGMCGGFSTLSAMMIEDLNSLRAENIVGFVTYTLLSFICGLIIAWLGTMLGLALSRK REAHVVARAVRESQAAGAPSGADLAVDSQAGSEPAAGRVQDMPVSDEQHLPSFEPDPITA EIPLRPDPETGEVR >gi|197324945|gb|DS990229.1| GENE 68 68860 - 69228 473 122 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0180 NR:ns ## KEGG: BBIF_0180 # Name: crcB2 # Def: camphor resistance CrcB protein # Organism: B.bifidum # Pathway: not_defined # 1 122 1 122 122 193 100.0 2e-48 MFALICMCGGLGAVTRFVLNTSIQRWWNRAFPLSTFIINVLATFFAGVAAAAYFYQTADH SSYLLFVTGFLGGFSTFSTAINEMVSLARSGKYAAAAVYFMMTVLVPVVCVALGWGLIAL VR >gi|197324945|gb|DS990229.1| GENE 69 69395 - 70432 972 345 aa, chain + ## HITS:1 COG:SP1799 KEGG:ns NR:ns ## COG: SP1799 COG1609 # Protein_GI_number: 15901628 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Streptococcus pneumoniae TIGR4 # 1 344 10 328 333 168 33.0 2e-41 MRDVAKKAGVSLSTVSLVVNGAGCVSDDMRERVAEAMRALNYVPNELARNLYHDRTNTVG VVVPTIRHPFFATLAAGLQRELSERGLRTMLCSTADSGTGEAEYVDMLRRHMMDGIVMAA YTEHAPDYWTSIGRPIVGFDCYLGEGIPSVGSDHEQGGRLIADLLIHSGSRHVAIVGGPC RQFHDLAQTPTGEARQTESPGNTTFPTVRYYLTLERELQRAGIRCEYIEAGEVADFQGCT TAMRELFDRFTDVDAVVSSDIGAACCVQEVFRRGMRVPQDVQVVAYDGTYLTDMAGLRLT AVCQDFDALAGTAVARMTDAIEGRPVDSAGDVIPVSLREADTTRR >gi|197324945|gb|DS990229.1| GENE 70 70515 - 70946 345 143 aa, chain + ## HITS:1 COG:AGpT251 KEGG:ns NR:ns ## COG: AGpT251 COG0366 # Protein_GI_number: 16119953 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 5 111 8 114 464 147 62.0 8e-36 MLRTRFAGVYDGVHVLPFFTPLDGADAGFDPIDHTKVDPRLGSWDDVAELSKSHDIIVDA IVNHMSWESAQFQDVLKNGEKSEYYPMFLTMSSVFPNGATEEDLAGIYRPRGESRKFRTP KSFTRRGRHIGRAALSCNMRPLR >gi|197324945|gb|DS990229.1| GENE 71 70997 - 72682 1764 561 aa, chain + ## HITS:1 COG:CC2315 KEGG:ns NR:ns ## COG: CC2315 COG0477 # Protein_GI_number: 16126554 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Caulobacter vibrioides # 191 560 53 415 418 68 24.0 3e-11 MTDDQQQPNEFPAPKPLPGSVYIRPGIDDRPDYDKVLSPEDKSAVARLAVHQPRRKVEAS VTQAETQVAQMTSEGSPAAAAASVDTAVPDMGSAYVDMRDPVVSADGQRPNPGQVTRLSW GFAVGATMAIVPWAALNLLALPAVIAKVSWQRVSGAVASRAAFSGGGQKLSESLVSRIGT VGDGGVASAWAIDLAVVVVVGVVVSLIAEAVVSALSDRTRVAAGRRTPWIIAGGIVSAVM TLALGLCSNVVGIALLWGLVQVGYVMLTVPMAAAFSERVPDKFRPRIVRARGIGQMVGQA LGVWIGVACVVFGGLYTPFATAAAVFLLAGIVPVLVWPKEPSSEEQPHTAMSAHMLMERF RAPRHAVEFWKAFASRSLVSAGVGLTTVFLWFIASALIFRDWFTQGNSSPIAVPVCSLIA SMALATLVGSVGAAFIAGPVGEYIEDPRYLSVISCVLYTVALALPMTMPSAVSMVLFALI GGFAFGLIDTFGQLLAMGALPDARSAGHDLAFFNLSNSVGLALAAIIGAVGVAVTGGFSV LFPAAIVCVLASAVVTISMKR >gi|197324945|gb|DS990229.1| GENE 72 72797 - 73003 67 68 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCLSVMQAERRQVVPTPPMLLCRGRPHSEPLMAVVESRAYVVRQSSAKELERHVRYRKEV RRDDWICC >gi|197324945|gb|DS990229.1| GENE 73 73272 - 74642 2121 456 aa, chain + ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 15 454 16 459 462 371 50.0 1e-102 MTAVTLTADGTTSVGGKAKAMVRDSVKTVIAASMVGTAIEFYDFYAYGTAAANYFPHIFF SAKDNPTVALLMSLLTFAIAFIARPLGSLIFGHFGDRMGRKTTLVVSLMTMGVGTFLIGC LPTYSQVGVGAVAVLCLLRFIQGIGLGGEWSGAALVATENAPEDKRALYGSFPELGAPIG FFLSNGTYFVLESFNDTDAMCAWGWRVPFLLSAVLVIIGLVVRVHMEETPIFRMAQEQKK VVKSPLTEVFRKSWKQVLQATFLVAVTYTLFYTLATWSLAWGTKIKREGGGDLGFTNQEY LLMLMISICVFALFIVLSCLYADRIGRRRVLMFSSCALVVFAVLFPFLLDSGLVGQKNFA ATMVFLCLGFALMGIAFGPIGAFLPELFDANVRYSGSGIGYNLAAIVGAAFVPTIATWLS KNFGVHSVGLYLAVMAVCCLIALATCKETKDVDFTK >gi|197324945|gb|DS990229.1| GENE 74 74888 - 75940 1594 350 aa, chain + ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 330 1 332 337 354 54.0 1e-97 MAATIWYEKDADLSVFDGKKVAILGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVEFAKE QGLEVKPVGEAVAEADVVMILLPDQYQAAVYKKDVEPNLKPGAALAFAHGFNIHYGYIKP SEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPDGKTWPLCLAYAKALGALRAGA IKTTFTEETETDLFGEQDVLMGGINHLCDLGFDVLTEAGYQPEIAYFEVFHELKMLVDLA NEGGLNKARWSCSDTAQYGDYTSTVITDETKKRMQYQLKRIQDGSFAKEFMDDQAAGAPK FKELQEKFSHPHLETVGPKLRAMFSWNNGPAKDQDEAESFNGKIARTQVQ >gi|197324945|gb|DS990229.1| GENE 75 76155 - 76457 151 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVALRAVTDDRDLLAFEHGEVTVVVIPDLCSHVWHSFTCVPALLPAHGVVCGCALCRSL HSARLGSGMGPVDPSVKDFVLRTEDYPTGNAATAPSPSTT >gi|197324945|gb|DS990229.1| GENE 76 76359 - 77411 1590 350 aa, chain + ## HITS:1 COG:MT3081 KEGG:ns NR:ns ## COG: MT3081 COG0059 # Protein_GI_number: 15842559 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Ketol-acid reductoisomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 326 1 328 337 372 56.0 1e-103 MAAQIWYDNDGDLSVLEGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLRPTSKSVAFAKE QGLEVKSVPEAAAEADVIMILAPDQYQRTIWANDIEPNIKPGTAVAFAHGFNIHYGYIKP SEDHPVFMVAPKGPGHIVRREYAAGRGVPVVVAVEQDPRGDAWDITLAYAKALGALRAGA IKTTFTEETETDLFGEQNVLMGGVNKLVEMGFEVLTDAGYQPEIAYFEVCHELKMLVDLM NEGGLNKARWSCSDTAQYGDYTNTCIDEHVRERMQYHLKRIQDGSFAKEFIDDQDAGAPK FKALQEEYSNVRIETVGPKLRAMFSWNKDAVKDADEANSFTGKIARAQVQ >gi|197324945|gb|DS990229.1| GENE 77 77848 - 78837 481 329 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0187 NR:ns ## KEGG: BBIF_0187 # Name: not_defined # Def: protein of unknown function (DUF559) # Organism: B.bifidum # Pathway: not_defined # 1 310 1 310 329 610 98.0 1e-173 MNTNQHTPVSSSATVANNYLARSLHQLQSTTFLHCMEHSRKTINTSPPVYTGMTALRLAG IETPLCSRFEAMKFQVLYIGEPTKRSGRKDTSYLKCPPSLTGIAHLTWTHDNITIVYTHP LMTWALLAPYLTQIEVIVLADAILRASSGSMTVANISRFLDGADAFPGRRKCIDALVFLD AVTDSTMECRCTLVMLRHGLPQPVKHWKILIPELAHEAIVDIAYPKQRVIIEYDGDAHRR DKRQYRWDERKRQALRAMGYTVIVVFADDILTSQGRRRFAQRVAKALDTTCRNRPHPKFR ALLADDRAETARQRQRRYRARERRKGRRV >gi|197324945|gb|DS990229.1| GENE 78 78883 - 79179 76 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIRYPYPCTAEARNTVTVCGLRHRVRPLSVAQLAEPLKNKGFTWASLCARAHRVTHPAHS DAFLHPQSSTTRSISASYISTFATSLWITDELYTYPQI >gi|197324945|gb|DS990229.1| GENE 79 79210 - 83085 4881 1291 aa, chain - ## HITS:1 COG:TM1193 KEGG:ns NR:ns ## COG: TM1193 COG3250 # Protein_GI_number: 15643949 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Thermotoga maritima # 414 772 282 602 1087 280 40.0 2e-74 MFIPRYYESLGHLHVGTQPNRAYYVPASTPMDTVGENRVNSDRFMLLNGDWDFKYYASIY DLDAEVSRLRAAGRPVFYDVDFGGDDAPENADPRTAATGALAADGFTTTPVPSVWQNHGF DRHQYTNFDYPFPFDPPFVPQDNPCGVYLCDFMHTSDPDAPCTYLNFEGVDSAFYAWVNG EFVGYSQVSHSTSEFDVTDVLEDGVNTLAVLVLKWCDGSYQEDQDKFRMSGIFRDVYLLD RPEYAIRDMFVHTSIWRNVDSALVEAGISDDEYDASPVDHATVDVDFAFFDDADVPVKVQ LFDEDGELVAETASEPIDDPMAGDEDDVTVRTQPDASEADDATGTGSDDTAADDEEEGVI ESTDDVAAIDDDSTDAQAALRIASVTGTLAGGANGTGFTGDSAFAPTAHASLAVDDPHLW TAETPYLYTIVYTTANEVITALVGIREVSVDGNVVKVNGKPIKLHGVNRHDSDPVTGPVI SEEQLMRDLTLMKEHNVNAIRTSHYPNAPHFYDLYDRLGFYVVAEADNESHGAMRGVHPD ESDAAVNKRWNRPIADNPAWIAPTVDRAQRSVERDKNHASIIFWSMGNECAYGCTFEAAL LWTQTFDPSRLTHYESARYVDEGQECDYSYLDVHSRMYPSVEEIDQYFSEEGPRTPDGLR DGSNGDDGDNGVKPYVLCEFCHAMGNGPGDLEDYFTRIQRYDGLAGGFIWEWCDHAIDRG TNAAGKREYAYGGDSGEYPHFGNFCMDGLVYPDRTPHTGLLEFKNVYRPVRVTGFDAAAG TVTLHNYLDFLDAADAVFMTFELLVDGVETAWAAWESDPAAGAAFREEHPGNYTPSMPSI APHGDAVVDIPAEILDAIPEAGNVTMLVKYYQATDTETLPIGFELGFDEVAVPTADPRNQ TVVAALADIADGIGSDDDVDDVADDGTDSVEGADDGANDAADAGYDDVLADPLTVMQTDA SITVEGSTFRYVLDRRTGLFSSMSFANRSLLNRPMELNVWRAPTDNDQYIKADWIRAQYD RAQARAYEVGVLVDEDDVIAKPESIELRADDEDAPVASFGDDAILDDGNVDAGDVSAIAT SEDGSVVVDGQVTIHATMALVAPIVQRIADIDADWTIAPDGSVALRMHVMRDTDFPFLPR FGLRLFVPKPMRQIAYCGLGPNESYIDKRRSSYHGVFSGTPESLFEPYIKPQENGNHHDC DWASVASDDTELLVLRAGDHAFDFQALPYTQEELTAKAHNSELKPADSTVVCVDYMQSGV GSNSCGPKLHEKYRLDDAEFDFDLVLRPQAL >gi|197324945|gb|DS990229.1| GENE 80 83382 - 84878 1799 498 aa, chain - ## HITS:1 COG:YPO1743 KEGG:ns NR:ns ## COG: YPO1743 COG1113 # Protein_GI_number: 16122000 # Func_class: E Amino acid transport and metabolism # Function: Gamma-aminobutyrate permease and related permeases # Organism: Yersinia pestis # 25 491 8 447 457 395 47.0 1e-109 MSKNTMHDGTATASRPGTGNTPAPAALRKSLKNRHVQLIALGGAIGTGLFYGSSESIALA GPSILLAYLVGGLAIFMIVRALGEMSVEDPRAGAFSYYATRYWSKRAGFVSGWNYWFNYI LVSMVELSVVGSFVNYWFPAIPQWVSAAVFLVVIAAMNLLGVSKFGEFEFWFALIKIVAV IAMIVGGLAVLIAGLPTDSGVKASFSNWFALDGGVLPHGLLQQSADGQWTGLLMALVVVM FSFGGTELIGITAGETEDPRRTIPRATNGIIWRILVFYIGALGVIMAVVPWNTIDGTTSP FVQIFDSVGVHAAAGILNFVCLTAVMSVYNSGLYANSRMLYSLARQGNAPEILGKLNFHG VPVVGVLASAAITALAVVVVFLWPDFAFNYLMSIATIAGVINWSMIMVTEIHFRRRVAAG DGPGELAGLTGDEALGRIHFKLPFARVMPYVVLAFLAFVVVLMCFSSSYRVAVIAGVVWL AILLTAYQVTQTCKTVRP >gi|197324945|gb|DS990229.1| GENE 81 85056 - 85268 81 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFWQPPETQIDVRRTRNHPLETQIATKSRRRDDEEGSDRDRGAHRGMTHPDEPMRETKRR TVTSTRQRMA >gi|197324945|gb|DS990229.1| GENE 82 85420 - 85647 205 75 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSAIERLASRLHNRDLLNRDYANDLCRCEEYVMPRRFLVTSISDSSSAAAALWPYDFGWV EAGIVCLTGRRACPW >gi|197324945|gb|DS990229.1| GENE 83 85619 - 86188 844 189 aa, chain - ## HITS:1 COG:BH0719 KEGG:ns NR:ns ## COG: BH0719 COG1309 # Protein_GI_number: 15613282 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Bacillus halodurans # 9 187 7 183 188 114 34.0 7e-26 MAKELTESRRTRYTRKAMQDALIDLMRERPLGSITIKALCEQADVNRSTFYAHYDSIEEL LHDIEDETMAWVTTALDQLLMQPDAAGVEHVIEHICRYIADNRNHLQVLMSPTADLDFQQ QLLGLIYSRRSVAEQMQPASSDPAEAQMRMRFAVSGSIGLLQYWLATDLAAPPETVAHII FTMGMPGAR >gi|197324945|gb|DS990229.1| GENE 84 86323 - 87027 201 234 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|119503196|ref|ZP_01625280.1| Ribosomal protein S16 [marine gamma proteobacterium HTCC2080] # 1 218 1 215 305 82 26 7e-14 MMAYIEFDRVVKEYPSGRTTIRALDEASFTADRGELTVILGQSGAGKTTALNILGGMDTA TSGRVVVGGRDITGLRKRDLIAYRRMDIGFVFQFYNLVPNLTALENVELASQICPDHFDP ADTLHKVGLGDRLSNFPAQLSGGEQQRVSIARAIAKKPKLLLCDEPTGALDYETGKEVLQ LLQDICRDENMTVLIITHNSALAPMAHKVVRFRSGKVVGEDVNPAPTPIADIEW >gi|197324945|gb|DS990229.1| GENE 85 87036 - 90455 3471 1139 aa, chain + ## HITS:1 COG:lin1187 KEGG:ns NR:ns ## COG: lin1187 COG0577 # Protein_GI_number: 16800256 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Listeria innocua # 56 1139 5 1136 1136 413 27.0 1e-114 MGRHAHRNKGRKADGDSAGWSPASDVPTEVIPGIYDLAADTDTGGRPSRGRSLSGAFVKD TMRSWLHGWKRFLSIAVISLLGVAVMTGIYAGCRDTFRAANRFYDAQRLHDIQVLSTYGL TDDDVAALKQVRGVDVVQPERSQSVEADVKGTDKTVTINEIGVNGLDQPYLQDGRIPSKA GEVAVTKKFLADSGMAVGDSLTVTPVDTGTATSTVSDTDSADSGANGTEPADEQADASQS APSFPTELTITGTVIDPKDLSNPDGYSGAKAFRNSLASDYTFFAPSDGVTGDIYTAISLT VSGSTDEDAFGDDYDTLVRDVADRIEATVQTKRQNERRQTLVDAAQKKLDQAKTDAYRQL DDAQMQITEQTEELKTRREQAKTTKQSLEDQLTQLEDQSEQLQDGKDQVNVGLLQARQGQ SQLQQGIATAQTMNDLAAQGARAAEQAADAADQAVAGAQGLPETVLEPLRKAAKAAHDLA TQARSKADESAARLTQLQSQLSQVNATIAQLEAQSATLQRQTEQLRGGRQQIRDGLKQIA AGEEQMDTGERQLKDAQDRLDAKRKDADSQFAKQQQRVDDIAAARWYVQTRSSIGGFSSL KSDISSIESIGYAFPVVFLIVAVLMSLTAMTRMVEEERGLIGTYTGLGYGNAAIAMRYVL FAALACLIGGGLGLMVGFLGIPSFLLLVIEGLYTVPGIQLEYDWLYGSTGIALFVVGVVV ATVVACAGALRQSPAQLMQPKAPKAGARILLERIRPLWRRLSFLNKVTARNIFRFKSRLL MTVGGVAGCTALIVCGFAINDTVATLGPKQYEDIYHYDLLVVSGDDSVDAMRARLDKDGR VERSLDLRLDSGEMDAGDAGETIQLMIVPDDSAGALGDMITLRSASGGHGKLQLGGDGII VAQSAANSLGVKAGDTVTLRDGSMRHGEVKVSAVTRNLIGSNVYVSESLYKKTFGVSTAV THNAVIATLDGTADQNIAYADRLARDPSVVSATSTDDLERSFSFDLMSAVVALIIALAGG LALVVLFTLANTNVSERVREMATLKVLGFYDREVHRYVNKEMLILAGMGIVVGLPLGRAV GGLLTAALNMPALYFEVSVHWYSYVIAAAATMAFALLVQLLTNPVLDRIDPVSSLKSVE >gi|197324945|gb|DS990229.1| GENE 86 90472 - 90951 752 159 aa, chain - ## HITS:1 COG:BH4007 KEGG:ns NR:ns ## COG: BH4007 COG1576 # Protein_GI_number: 15616569 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus halodurans # 1 159 1 159 159 190 59.0 8e-49 MRISVICVGRVKEQYLRDAIAEYSKRLGRYCKLDIIEVADEKTPEHASEGVERQIRAKEG GRIAKHIRPDAYVIALAIDGTMLSSEGLAAHINQLGLHGESHIQLIIGGSIGLDDAILRR ADYRLSFSKMTFPHQLMRVILLEQLYRAYKINAGEPYHK >gi|197324945|gb|DS990229.1| GENE 87 91183 - 91824 931 213 aa, chain - ## HITS:1 COG:SA1914 KEGG:ns NR:ns ## COG: SA1914 COG0035 # Protein_GI_number: 15927686 # Func_class: F Nucleotide transport and metabolism # Function: Uracil phosphoribosyltransferase # Organism: Staphylococcus aureus N315 # 2 210 3 207 209 201 50.0 1e-51 MELHVLDHPLVEHKLTVLRDKNTSSATFRELVTELVMLEAYEATRNLDIVDKPIETPVAP MVGKHIASPAPIIVPVLRAGLGMLDGMTKMIPTAEVGFLGMKRDEEHPTQQITYANRLPE DLTGRQCFLIDPMLATGGTLVTATHYLAERGAKDVTAINIIAAPEGIQYVQDHIDPSIAF KVVVCAVDEKLNEKAYIVPGLGDAGDRLYGVID >gi|197324945|gb|DS990229.1| GENE 88 91990 - 92244 327 84 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0195 NR:ns ## KEGG: BBIF_0195 # Name: not_defined # Def: ABC transporter related protein # Organism: B.bifidum # Pathway: not_defined # 1 84 1 84 84 145 100.0 5e-34 MAFVPQGQQSFGTMTVDENLHVVAGRYGSEAKARYDEAVTMFPVLKEFAVERADRYYVLA SGRFIATGEGGPAQVEAAKEAMRV >gi|197324945|gb|DS990229.1| GENE 89 92320 - 92877 744 185 aa, chain - ## HITS:1 COG:ML0424 KEGG:ns NR:ns ## COG: ML0424 COG1225 # Protein_GI_number: 15827132 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Mycobacterium leprae # 23 184 5 155 161 159 51.0 3e-39 MTENHASDQSPQPGQSSQPALPTRLTPGQPAPDFTLPAVNPDGGETSVTLSRLLAQGKRV VLYFYPAAMTPGCTTEACDFRDNIARLTALGFTVLGVSKDPIDKLQRFRERDHLSFPLLS DADLTVHRLYGAYGEKKLYGRTHIGVIRSTFVISVSVTGAAGTIEIARYNVRAKGHVASL MKALQ >gi|197324945|gb|DS990229.1| GENE 90 92965 - 93882 1013 305 aa, chain + ## HITS:1 COG:Cgl0658 KEGG:ns NR:ns ## COG: Cgl0658 COG1295 # Protein_GI_number: 19551908 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Corynebacterium glutamicum # 25 285 43 303 361 69 25.0 7e-12 MQWLHRIGEAIDSLVAWWRRSLTGRVIDRYVSRRGPLLANGLAYGLLFAFFAGAWIVVSA LGLVVTGSEEMQKTLLAMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTG WMNSLRNAVTTMFDDCTQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRA LGIADDSLPGALLLESTGFATGVLLNFALFMLLLRVVAHIRAGKFTLVGAALGALAVAVM QLLGARLLTGASRNPMLAPFAAIIGVLIWFNLVAQVIMICAAFIAECRRGAGRAGASYSR CQLTG >gi|197324945|gb|DS990229.1| GENE 91 94004 - 94252 369 82 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0160 NR:ns ## KEGG: BBPR_0160 # Name: not_defined # Def: glutaredoxin # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 82 1 82 82 167 100.0 9e-41 MAIDVYGATWCGDCHRAKNALDRFGAAYTWHDIEQEEGAADRAVEISGQKHIPVVLYGDG SFQVEPSVVDIQNKLNELGLLG >gi|197324945|gb|DS990229.1| GENE 92 94385 - 94951 387 188 aa, chain - ## HITS:1 COG:MT3905 KEGG:ns NR:ns ## COG: MT3905 COG3464 # Protein_GI_number: 15843420 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 1 167 179 370 444 94 37.0 8e-20 MAVDHKRRRVAWAHDGYGKEVPGLFFRQPTDEQRASIRAVTGDGAEWIDASVKERPPNAE RVPDSFHIVSRMSDAPDQVRKRVRNQARRGNDKTATEAMRGVRYAVPKNPEDLTERQDTD PRGQPYRSWQLKELLGTLPHQPTGQAGAKLKRWIFRASHSRIPEIVESFTVPALPEPFNY QNSNSAYE >gi|197324945|gb|DS990229.1| GENE 93 95020 - 95265 119 81 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282270|ref|ZP_03645592.1| ## NR: gi|224282270|ref|ZP_03645592.1| hypothetical protein BbifN4_00405 [Bifidobacterium bifidum NCIMB 41171] # 1 81 1 81 81 103 100.0 5e-21 MHGIEDSKRAATLRAIWAAVLHAMRGNPPAVFWLATAAGHAHSISKPLVSRLSGSAHGTW AAAAPCSAHATRGARPMSSIP >gi|197324945|gb|DS990229.1| GENE 94 95568 - 95735 74 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHATAGLMILRIFPICMTRLSLALSYFNDDANVPLQCAYASWPLQGYPPLFGDDG >gi|197324945|gb|DS990229.1| GENE 95 95686 - 98154 2441 822 aa, chain + ## HITS:1 COG:BS_yvnB KEGG:ns NR:ns ## COG: BS_yvnB COG1409 # Protein_GI_number: 16080557 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Bacillus subtilis # 343 668 919 1207 1289 99 24.0 3e-20 MHIGKIRNIIKPAVACIALAVFAAPGTVVSAAALEREGAPLDVVADWKFQQAHSTGSIDG GDLVIKDMSGNGNDLHMQTYGKNDYKLSDYVNWSSNSMNGDGGGSLKLNGDSDLAHKKDH PEQRDPKGADFITASGAPINKEQFANGYTMEFVYYLPDDFNAGTDSWMGLAARQSTNSNM DEHEMGSMSLSISNCKETQFKAANKDNESTMNTDDPNNGVTSWGVTMDHGGVWYHIAVVS DGTNVVTYTNGAKAFRNINKNGNGLYADPTDGRFRIGSSYYNDTFDTSQYNKDDFDKFLR GNLQEVRFSRGALAQGNWIVPNPTEYLKDYGTNDRFVLDNPSVHTMAFLPDTQNAIRWVP TVMDRAIDQFDSEDSSLNLTNIVSLGDVVDNWDSDAQWQASSKAFGRMQKVGVPFLEQPG NHDYNGGRHGYGVPSLRKADNYLKHFGPDSDFGKYQKEHGFAYSPDGLSSYHLVDNGSYK YLVMNIDMGAVVSNSSSASNDDMRWFEQVLKDHPNNPTVVVSHDIFKCSDSRPNEISLDD DSGYNGEAGDDEGAGSKIWNIVKRYNQVFMMYSGHNHGSGQMTLTNDAGNPVLGLLSDYQ FAYNGGNAFFQYVGMDEANNKITMRTYSPYSASLPAAERSFFDVNSLTGVGNTYDGSFDF AKRFAGYEHSSGYDTQQSVISLVCGIGALNGQTPASEVRQLYTALAALPDNVKAQFGDPS DSGSLAGRLAAAYNAAFPKPEQPDTKPGAGNQTGSQGGHQGGQSGSQQGQKGDGHGKGQT NAGPEAMASTGADVAPIVVIAMMTILLAGVLVLVKRKHHLSH >gi|197324945|gb|DS990229.1| GENE 96 98626 - 100806 2056 726 aa, chain + ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 20 721 9 672 672 363 34.0 1e-100 MRARRDFAWPKLLTADGRGIAFGGDYNPDQWPEDVWDDDIRLMTQAGVNTVALAIFSWDR LQPTEDHWDFGWLDRIIDKLGKAGIAVDLASATATAPLWLYENHPEVLPRDKYGHPVNAG SRQSWSPTSPVFKEYALTLCRKLAERYGANPYVTAWHMGNEYGWNNRDDYSDNALEAFRA WCRRKYGTIDALNQAWGTTFWGQEMTGFGEVLIPRFMGADSMVNPGQKLDFERFGNDMLL DFYKAERDAIAEIYPDRPFTTNFMISTDQCCMDYAAWAEEVDFVSNDHYFHEGESHLDEL ACSDALVDSLALGKPWYVMEHSTSAVQWKPLNTRKCKGETVRDSLAHVAMGADAINFFQW RASAFGAEAFHSAMVPHAGEDTKLFRQVCELGATLRALADAGVQGSGLAASDTAILFSAE SEWATRSETLPSMKLSHWHDVRDWYRAFLNAGARADIVPLAYDWSSYKTIVLPTVLILSD ADTRRLAGFVQAGGRVVVDYATGLLDERFHTWLGGYPGAGDGLLRSMLGVRGEEFNILGA GAEGEPNEIRLTGTRDSSTMDGAVTRLWQNDVTVAGPHVQVLATYAGEEADEWELDGTAA LTRNAYGAGEAYFLGCDLGVSDLTRFVSGWLAVQPQSSRQPQVNSQPQSSRQPQVVGATP DVLHTVRQSDDAIFDFYLTRGRSDVELRGIAGEPIVLFRAERGSDGGAYTVHRNGVLVVK RPNPSL >gi|197324945|gb|DS990229.1| GENE 97 100841 - 100951 115 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVLGNGPRPPTEIPVATGCFRLYFNVFGLPLKCLAA >gi|197324945|gb|DS990229.1| GENE 98 101117 - 102112 610 331 aa, chain - ## HITS:1 COG:Z5892 KEGG:ns NR:ns ## COG: Z5892 COG3440 # Protein_GI_number: 15804871 # Func_class: V Defense mechanisms # Function: Predicted restriction endonuclease # Organism: Escherichia coli O157:H7 EDL933 # 211 312 181 283 294 62 36.0 2e-09 MAECVDQSLSESPFVKFGNHRRKQTHGQLRAWIPGLERLGYLFYGFEQRATVGLIHLDVG THKNLKSRLIRRHKPLQRFFVADKQQPCQSRRQLTIDRHNKAQRFLQVRIRKLQKIPVTG LIGSDDFAQAVTLQWIEIIPGGLHHRLSGIVKSAQIRKTGGNLIRIHGHTFWRTIHCSPL ETATALFIAEHAPTGEERPATILQRVNQSYFRNSLLQNYHGTCCITGMQIPKLLIASHIK PWKASTPNEKTAASNGLLLNAFHDRAFDQGLISIDDDYRIMVNHDKVRHSDINDRWLYDF DGHEISLPAISQPSHEFIEYHHKHIFLANAA >gi|197324945|gb|DS990229.1| GENE 99 101612 - 102892 887 426 aa, chain + ## HITS:1 COG:DR2199 KEGG:ns NR:ns ## COG: DR2199 COG2865 # Protein_GI_number: 15807192 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Deinococcus radiodurans # 17 422 142 583 596 151 29.0 3e-36 MYPYEIATRLSDLGRLDYSAQPVMESTRDDLDPLERDRLRKIIASYQSSDRNLLELSDAD LEKSLRLVVSVNGELTPTLAGLLLIGNEEALQRLVPTNEAAFQVLVGTDIKVNQTYRGPL LKTIEQIAESFKPWNPGTELTVGLFSSVVPEFDERAFREALVNAFGHRDYSLLGRVRVLV DDAGLTIANPGGFVEGINVHNLLTAEPRGRNPCLMDALKRTGLAERTGRGIDRIFEGALN YGRPLPDYSRSNRRGVSVLLPRSVPDKAFVELLAEERERSGKSMSLDGLLILDKLKSERR CGFDVLSGSLDMSDQRLRTVLGQLTEAGLVESAGVGARRTYMLGAKVYRRSGRAMEYVRQ SDIDRVRYPELIIELMHEQKSVSKNDVMELLHLEENQAYYQLRKLVLEGRAKKVGSGRNV RYAAVR >gi|197324945|gb|DS990229.1| GENE 100 103935 - 105503 1688 522 aa, chain + ## HITS:1 COG:MT2395 KEGG:ns NR:ns ## COG: MT2395 COG0477 # Protein_GI_number: 15841836 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mycobacterium tuberculosis CDC1551 # 25 433 7 413 537 196 33.0 8e-50 MQSERSLIPTPMPVRRHARSGNRGLALTALCLAVLLVVMDNTIVNVAIPTMSDALNASST DLQWVVDAYTLSFAALLLPAGKLSDRWGRRRMLLVGLAGFAVVSAATAFSWALWQLVTLR VVLGVCAALIYPATLSSIIVIFEGSRYRSLAVGLWAATSGVGIALGPIIGGVLLEHYAWN SIFWVCSVIGVVALACIAVAVPEVRAYRSERFDFPGTVLSVAGVGLLVWAIIERPTYGWL SWQVIGGICAALIILAVFAAVEGHMHAPLIDVGLFRRATFTSSTCAICVAFFCLFGFIFI TTQWFQALRGYTALQTAVATLPFAVVMAAVAPLATQLAKRFGYRSVVSTGLLFLSASMFV VTRVDAHCSYWFVVVPTMALMAAGIALIQGPATDALMSTVPESSTGAASAVNDTIREIGG TLGVAVMGSAISSVYPDELSDSLSGLQIPSSIAKAAEDSVMAAKSILPHLPAGIRQTVEQ SVSTSFMSATHAACWIACALALAFALLCWITLPKHDSGNLPQ >gi|197324945|gb|DS990229.1| GENE 101 105519 - 105653 250 44 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0169 NR:ns ## KEGG: BBPR_0169 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 41 1 41 81 83 100.0 3e-15 MKDDGRIPRIKDTDMTDRLLTAGAIAEDTRNPIGDIAACFPLAS >gi|197324945|gb|DS990229.1| GENE 102 108305 - 108982 635 225 aa, chain - ## HITS:1 COG:BH0335 KEGG:ns NR:ns ## COG: BH0335 COG2801 # Protein_GI_number: 15612898 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 16 218 32 256 261 133 34.0 3e-31 MIEHPEAGRVDPIAGDVHAVRRDGHERCGAGKIKAALERRGVTASGRRIVNIMKRRGMAG AYARRTSEPHRTRADGAGLANILDREFDGYGPRAHLAGDLTYVRVGGEWAYVCLLIDLAN RGIAGHGADTGRAAGLVMAAFATLDFPLTGVEVFRTDRGGGFDNAVVESTDRLLKKEPIY RNHYTSPEQLRSDPDDYVWWSDNQRLHSTLAYRSPKEFTEQGLVL >gi|197324945|gb|DS990229.1| GENE 103 109066 - 109353 280 95 aa, chain - ## HITS:1 COG:BH0334 KEGG:ns NR:ns ## COG: BH0334 COG2963 # Protein_GI_number: 15612897 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 5 95 4 94 94 60 40.0 9e-10 MAGPRHPRHCEESFKRRIVRLCENGRPAREIRDEYDISRSTLHRWVQGIRDSGSAKAADN RTPERNEPVELRKRNGQSEMEVDVSEQAAPVFARR >gi|197324945|gb|DS990229.1| GENE 104 109244 - 109465 152 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSYSSLISRAGLPFSQSRTIRRLNDSSQWRGCLGPAIVGLQPHVDRPPSDCLTHCSQSMR ELRILKDALRHHR >gi|197324945|gb|DS990229.1| GENE 105 109795 - 110412 565 205 aa, chain + ## HITS:1 COG:mlr3102 KEGG:ns NR:ns ## COG: mlr3102 COG1309 # Protein_GI_number: 13472716 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mesorhizobium loti # 3 158 7 172 214 72 25.0 5e-13 MTKSQRTPTTEIRGLILDASKRIIEEDGYDAFTIRLLSEKADVSPASIYRHIGDKQAVID ALIDDSFQTLREKLLRVTTEDPLQRLYDAGVVYRGHAKASPGIYALLWRWHAGEASEACL AAMTELVRYGQAAGKIRRDDPHLIAWSIWSAVHGFVQFETRPEHDTPVDDDDAAYSFLLR LLIRGVRTPQTVSEGTATIADTSRS >gi|197324945|gb|DS990229.1| GENE 106 110361 - 110798 316 145 aa, chain - ## HITS:1 COG:ML1547 KEGG:ns NR:ns ## COG: ML1547 COG2977 # Protein_GI_number: 15827814 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Phosphopantetheinyl transferase component of siderophore synthetase # Organism: Mycobacterium leprae # 4 91 72 162 227 70 42.0 1e-12 MTGPILKGSDGEPLWPSGIVGSLSHCPSLCVAAVASAERIRAVGVDVDDSDGLSDGIMRF VFSSEELASLRMVSSVERRAAFCAKEAASKALSALDGMGDFRKVSVSLKADGTFAAVRRD VALRGQWRFYDRLVSAMVAVPSETV >gi|197324945|gb|DS990229.1| GENE 107 110764 - 111006 196 80 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0173 NR:ns ## KEGG: BBPR_0173 # Name: not_defined # Def: phosphopantetheinyl transferase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 73 14 86 187 140 100.0 2e-32 MCADLMMRRARLFGPLLASGCEVLISGKGTRRVRLFDGERALVGNATAKRRREFTETRLL AHEALRRIGHDGPHTQRFGW >gi|197324945|gb|DS990229.1| GENE 108 111008 - 111076 65 22 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METLSTETHKPSNSKAFYQFPE >gi|197324945|gb|DS990229.1| GENE 109 111725 - 111868 223 47 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0209 NR:ns ## KEGG: BBIF_0209 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 47 1 47 47 82 100.0 6e-15 MPHDAQTAFAIRMLFTHRDADRYGADMFLHYERGFNVRFEGAGSNNY >gi|197324945|gb|DS990229.1| GENE 110 111818 - 112534 899 238 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0210 NR:ns ## KEGG: BBIF_0210 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 23 236 1 214 276 357 96.0 3e-97 MGEQHADGKCGLRVVRHGAERLVGVPSRLGDRLVGHTYQLVGVQSGKNLSATASGDSALS IADTPETLTDTKKQAWKFTQIDQSDTERPGLKAYVITNTDCKVLVAKDGTNAFSDESVED AKSDPAARWIFDTSDGATYQLLNASAKQNINVDAFDPKAGAAASDEEDGDLTDKILVEGS VNTEKAGEYTLTYSVTDSEGASYTVKRVVTVREKSEPIEPSKPIEPTELTKPTEPTTR >gi|197324945|gb|DS990229.1| GENE 111 112531 - 112686 101 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPNKPDAGNKQPGLSKTGASVSGVFGAFAALLAVGAGAALAARRRREPRR >gi|197324945|gb|DS990229.1| GENE 112 112964 - 113914 750 316 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 4 312 16 281 284 132 29.0 9e-31 MPRLGMGTMALSIEGRPDRATAIGTIHAALDAGVRYLDTAWSYYLPSEPGPDGTGVPRDF GYGEMLVHAALASWSGPRDEVLVATKTGYRRTLEVTNRDAEDPQQSPGDGASASASERQH LQAAGSRYGWMADSRPETMIRDAKESALRLGVDALDLLYSHGPDPAVPYEDTVGALKTLL DEGVIRFAGISRVDNAQIDTARGILGDRLIAVQNQFSPSHPDPEHTMGHCADLGLDFVCW SPLGGFLDAFDSHAYDPFRTVAAARGVSYQRVVLAWELTRYDRLFTIPSARNPHEVRDSF AAVNLTLAPEELSLLP >gi|197324945|gb|DS990229.1| GENE 113 113960 - 114310 75 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313139429|ref|ZP_07801622.1| ## NR: gi|313139429|ref|ZP_07801622.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 116 1 116 116 215 100.0 7e-55 MGMIHHFQRPRKLGPEERMGKFSCGVPFIDKWAAQRAPSSAQHGTAVAYVSFTALGEPAR FYTLSAYSALRARSVSGALGSRALIVEPYDDKARAFYAHFGFQPIPGTTSMYLRLV >gi|197324945|gb|DS990229.1| GENE 114 114301 - 114588 209 95 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0189 NR:ns ## KEGG: BBPR_0189 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 95 1 95 95 137 100.0 1e-31 MATLTKQTVSKQKTSRLDIRLTDAQRQLIERAAELTGSTLTQWTARHLLESARKDIEEAT VLHLESQAFEDFIQALDQPVPPAAEKLTERDPQWA >gi|197324945|gb|DS990229.1| GENE 115 114793 - 115323 590 176 aa, chain + ## HITS:1 COG:L131803 KEGG:ns NR:ns ## COG: L131803 COG1846 # Protein_GI_number: 15672890 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Lactococcus lactis # 19 127 19 129 154 63 35.0 2e-10 MGFEREALSELYASVWGNRSKMQKEFARGAHGEPFILHELALRGTMTPSQLASSLKASSG RISTVLAALEKKGLITRDIDPDDRRIIRVNLTDAGRERSKCDLEEMRSAICWIFSQMGER RTREFVDLLSEFSTYMAICHPGAPRPTPDEVRAAFAERDRRVADHMRTERAKAGEE >gi|197324945|gb|DS990229.1| GENE 116 115542 - 117425 2693 627 aa, chain + ## HITS:1 COG:CAC3282 KEGG:ns NR:ns ## COG: CAC3282 COG1132 # Protein_GI_number: 15896527 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 1 625 1 583 584 487 43.0 1e-137 MLRILKYLSKAEIGQMLIALVTIVGQVFFDLKLPDYMSDITTLVETPGSAMSDIWIAGGK MLLISLGSVACAIVTGYISARVGSSFTQRLRSLEFRKVESYGPAEMSKFSTASLITRSTN DITQIQMFITIGLQLIVKSPIMAVWAICKIAGEGFEWTLATGIAVVILLVAVVIMMAMVM PKFKAMQKLTDNINLVARENLTGLRVVRAYNAEDYQEAKFTKANKDLTDTQLFTNRVMAF MMPLMNTVLNGLMLAVYWIGAYLIDAAGLTDKLNVFSNMVVFSNYSVQVIMSFLLMSMVF VLWPRADVSAQRVLEVFDTDPIVKTGTKTAADVARLGGGKTGTVEFRNVSFTYPGSREAT LEGIDFTAEKGQTVAFIGSTGSGKSSLINLVPRFYDVSAGQVLVDGVDVREYDLKALRDK IGYVPQQSVLFKGTVASNVSYGDDVNGASSADVEMADTSTPAGRKREAELIAAGKRAEGA AMPTEQMNRVKAAAGVAQATEFVERMDGTYTAPIAQGGSNVSGGQKQRLSIARAVYRHPE ILIFDDSFSALDFKTDREVRDALAKEAKGSTKLIVAQRIGTIMNADRIIVLDDGKVVGQG THQELLDTCDVYRQIAESQLSQSELTA >gi|197324945|gb|DS990229.1| GENE 117 117455 - 119416 2471 653 aa, chain + ## HITS:1 COG:CAC3281 KEGG:ns NR:ns ## COG: CAC3281 COG1132 # Protein_GI_number: 15896526 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 81 650 174 698 706 528 49.0 1e-149 MPGPRGPMGGGRTVEKPANFGNVMGKLVHYCRNYLPVIIIALVLGAAGTICQIIGPDKLK DMTNEIVKGLPAIVNGKPVMNSVDFNAVGRIAWLLVALYVGYAVLSYVQSWMMANVTQRT AQRLRESISVKINKLPLKYFDKVSYGDVLSRITNDVDAIGQTLGQSLGSLITSATLFVGA LVMMFYNNVIMTLCAIGASILGLIIMMVIMKSSQKYFARQQMALGDVNGHIEEMYAGHLI VKAYNGEADSIRRFEKYNADLYESGWKSQFLSGLMMPLMNFVGNFGYVIVCVVGAALAMD GKIEFGVIVAFMMYIRLFTQPLSQFAQAFQNLQRCAAAAERVFGFLEEPEMDAEPTKAEL GVADAAASTARTDSGKLAHRGTRANATAGMTASQRSQLLGYDAAGNPRTVRGDVEFSHVR FGYEPDKPIIHDFSASVSAGQKVAIVGPTGAGKTTMVNLLMRFYEISGGSISIDGIDTTS VPRWNVHDQFSMVLQDTWVFRGTVRENIAYSKPGVTDEQIVSACKAVGLDHFVRSLPQGY DTVLDDNTSLSQGQRQLLTIARAMVQDAPILILDEATSSVDTRTEELIQKAMDALTVGRT SFVIAHRLSTIRDADMILVMNHGDVIERGTHEELLAAGGFYADLYNSQFTLTD >gi|197324945|gb|DS990229.1| GENE 118 119527 - 119694 79 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGEFPIYGARRVRGLWFASLCAHGRRSGAHIATQTGEGLLRADALVRQMAGVLP >gi|197324945|gb|DS990229.1| GENE 119 120250 - 126129 8577 1959 aa, chain + ## HITS:1 COG:CAC2367 KEGG:ns NR:ns ## COG: CAC2367 COG5492 # Protein_GI_number: 15895634 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 1652 1818 155 317 752 115 47.0 9e-25 MKHKAMSSRLMPLVASCATVGMLLAGLPASAVAVGTTRAAASDASSSTTATITPSADTTL QTWTSEKNSSMASKPYIGALQGPSQGVFGEKFESADAADTTDLKTGLLTFDLSAYDHAPD SATFEMTYLGYRGNPTATDTDTIKVTPVDTTVCTNNATDCGANVATGATKPKFSINDSSF VAESKPFEYGTTVYAGDAITVVPANTKKVTVDVTEIVRQQFAEGKKVITLAVGETKKTEV RFASSEGTTSLNGATADMAPKLTVSVSTKDDLKPSADTTLQAWASEKNEKKNTAAYVGAL QPEGDYGDFGEKFKSTDVHDVTDAKMGLMTFDLSDYTAAPEHSILTLTYLGYAGADKTAT ATDKVKVVAVDTSRCTGTAPCDTNNATWANRPDFEVTDTTKTATSHAFAYGSKKYSDGMT VESGNAKKVLLDVTDIIKAEFAKFSAGATEKKITLALGELNKSDMRFGSKEVTSLTGATE AMQPTLSVTKKPKAYTLSIEGPTKVKYQKGEAFDKAGLVVKATSTADGTVKTLTEGNGED NYTIDTSAFDSASIGVYPITVKYNKDPEIAASFNAYVIASVEDGGDGDTSKDDWLWYKQP ASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKIGGTVWGEVSRERVTFNEETLWTGGPG SSTSYNGGNNETKGQNGATLRALNKQLANGAETVNPGNLTGGENAAEQGNYLNWGDIYLD YGFNDTTVTEYRRDLNLSKGKADVTFKHDGVTYTREYFASNPDNVMVARLTASKAGKLNF NVSMPTNTNYSKTGETTTVKGDTLTVKGALGNNGLLYNSQIKVVLDNGEGTLSEGSDGAS LKVSDAKAVTLYIAAATDYKQKYPSYRTGETAAEVNTRVAKVVQDAANKGYTAVKKAHIA DHSAIYDRVKIDLGQSGHSSDGAVATDALLKAYQRGSATTAQKRELETLVYKYGRYLTIG SSRENSQLPSNLQGIWSVTAGDNAHGNTPWGSDFHMNVNLQMNYWPTYSANMGELAEPLI EYVEGLVKPGRVTAKVYAGAETTNPETTPIGEGEGYMAHTENTAYGWTAPGQSFSWGWSP AAVPWILQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTGVAYS PEQGPLGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGDTTDCSTDNWAKGDNGNFAD ANANRSWSCAKSLLKPIEVGNSGQIKEWYFEGALGKKKDGSAISGYQADNQHRHMSHLLG LFPGDLITIDNSEYMEAAKTSLRYRCFKGNVLQSNTGWAIGQRINSWARTGDGNTTYQLV ELQLKNAMYANLFDYHAPFQIDGNFGNTSGVDEMLLQSNSTFTDTDGKKYVNYTNILPAL PDAWADGSVSGLVARGNFTVGTTWKNGKATEVKLTSNKGKQAAVKITAGGAQNYEVKNGD TAVNAKVVTNADGASLLVFDTTAGTTYTITKKASANVPVTGVTVTGANTATAGDTVTLTA TVAPANATDKSVTWSTSDAAVATVNANGVVTTKKAGKVTITATSNDDKTKFGSIEITVSA ATVPVTSVTVAGDAAMTVDGEQTLTATVAPANATDKTVTWKSSDATVATVDANGKVVAKK AGEVTITATAGGVSGTLKITVSDKAPTVIPVQSVTVTGKQELVEGASTTLTATVAPADAT DKTVTWKSSDESVATVDKDGVVTAKKAGTVTITATAGGVSGTLHITVTAKPVETVPVTSV EVTVEAGTTVSVGKTLQATATVKPGNATNKKVTWKSSDESIATVDANGVITAKKAGKVVI TATSTDGTDKSGSVEITVADETKPTPDHKSVKADTGDVTAGKTGTVTEPKDVAGWKSRSI IKQGKLGKAEIADGTLVYAAGDKTGDDSFVVQYTMADDTVIDVTYSVTVKAAETGKNDGD GKGDGVAKTGAAVGALAGLGLMLLAVGVSVVMIRRKHSA >gi|197324945|gb|DS990229.1| GENE 120 126287 - 126856 771 189 aa, chain + ## HITS:1 COG:BS_yxkA KEGG:ns NR:ns ## COG: BS_yxkA COG1881 # Protein_GI_number: 16080938 # Func_class: R General function prediction only # Function: Phospholipid-binding protein # Organism: Bacillus subtilis # 18 173 13 154 168 118 39.0 8e-27 MRDTGDMKISADFTVMPDDFAKAAAPEYRTDGVPVISFPFYIDEIDPAARYLHWAFTDPD SIPVCGFEWIHWTVANLPIDALMYDFNDSHALQIPPDFSRQLPSMIPETVQGRTSAASKL VGSTNPQVTMRYNGPQPPDKDHDYSLHVWGTAKPLPGLNQGFWLNELFHALRDIDHVTDQ GVMFITGKA >gi|197324945|gb|DS990229.1| GENE 121 126981 - 128594 2244 537 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 2 536 9 472 472 513 51.0 1e-145 MACTTILVGKDASYDGSTIIARNEDSANGEFNPKRFVVVKPDEQPREYRSVISHLTIDLP DDPLQYTAVPNADLKEGIWGEAGVNEANVAMSATETLTTNERVLGADPFVEYRAARGREG DSDYEPAVPGGIGEEDFLTIVLPYVTTAREGVQRLGDLLKEYGTYEMNGVAFSDADEIWW METVGGHHWIAKRVPDEAYVTMPNQLGIDEFDLDDALGEQENHMCSEDLVEFIERNHLDL AVESTSPFNPRDAFGSHSDSDHVYNTPRAWVMQRFLNPYDEMWDGPEADHRPDSDDIPWA RQPERKVTIEDVKYVLSSHYQGTPFDPYGHLGDEHTRHMYRPIGINRQSQLAVMQIRPYR PQSDRAIQWIAYGSNPFNTLVPFYPNVNETPKYLEDTTTRVTSENFYWENRIIAALCDAA FAETSNAIERYQEKTGAMGHRLIAATDEQVARLGGAGEAAAALADAELEAANADGDVEPM DPEDIIDATRNDEVRDILAAANQTMADQLKTETDQLLDTVLYTVSMKMKNGFNRSDN >gi|197324945|gb|DS990229.1| GENE 122 128687 - 130204 2097 505 aa, chain + ## HITS:1 COG:CAC3201 KEGG:ns NR:ns ## COG: CAC3201 COG2759 # Protein_GI_number: 15896448 # Func_class: F Nucleotide transport and metabolism # Function: Formyltetrahydrofolate synthetase # Organism: Clostridium acetobutylicum # 34 503 51 537 556 172 30.0 1e-42 MTTIEEFTSQYGLVKKIDAFGFMKYLHDNPDAPRKHGKVVLVTADTPLKASRGEGKTTTT IALIDALRDRGIDATAVLRQPSMGITAAGSKGGASGGGKASLTHPELIDWGLCGEMAAIA AAQNLLVSFAEKAVDEGRIDTILVPRVSEVPSRSLRSITVDAGKNNVAEKVVLTPTSELM QIVVLSRSMDEIGERVAAMIAGTKDGEPVKFGDFIDLWRITDMLADAVKPALTETVNGSP VYVHGGPFANVSIGIPTLVSVELACALHDVVIVEAGYGTDAGAQKWLDIACREYGAQWPS AAVVVTRASTWRDDPELAWRYPFHVDRLEKLDIPAFPLVNLWDGEDDQIPELRETAARLE LRDPIIGNLYRDGGEGLSDQIDAFVDVLSNASMPSKHDSHKGMALLENVKWVAENAYGVP ASRVLLKDGFLDSLGAADDLCKAAGMSLDDLALVAVKSPATMTDNDRAPEDERTVTLKKV EVHAGAGLVHVNLTTSLTTPMPKIV >gi|197324945|gb|DS990229.1| GENE 123 130281 - 130553 145 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPHSRWPHTVTASSQPLSDCRPIIRADWPQGALSFIYRQPVCRKKVSLCEGYVTVCVLAL VTHPRNPCKIRVLRFTSLCEGSQRDGGRTQ >gi|197324945|gb|DS990229.1| GENE 124 130598 - 130945 553 115 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0219 NR:ns ## KEGG: BBIF_0219 # Name: not_defined # Def: hypothetical protein containing MIF domain # Organism: B.bifidum # Pathway: not_defined # 1 115 1 115 115 229 100.0 3e-59 MPVIHTHVSVKTTPEQREALKAAYGKAITAVPGKSEGWLMCPFEDDMPIYFGGSDDAPAA YVEVNVFGRSVPGSAWEKLTKSIMAALNSELGIPEDRTYIRYTATTDWGWNGGNF >gi|197324945|gb|DS990229.1| GENE 125 131106 - 131639 579 177 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0220 NR:ns ## KEGG: BBIF_0220 # Name: not_defined # Def: GtrA family protein # Organism: B.bifidum # Pathway: not_defined # 1 177 1 177 177 309 98.0 4e-83 MKFGIVGVVAFIIDWGLMNILLMTHMHNVLATSISFFVSLIFNYLASMKFVFKHRPDMAR WMEITIFFVAALIGWFMNEAIVWTSTSWMPHDSMYSMHTRYVLWTNVGKLVATVVVMIWN FVIRKWLLDDTHTNAMNRLRKSENRLSQEELEAKWENSFSHRLGLWSLAHTPEGWPK >gi|197324945|gb|DS990229.1| GENE 126 131731 - 133161 1846 476 aa, chain - ## HITS:1 COG:SMb20338 KEGG:ns NR:ns ## COG: SMb20338 COG0477 # Protein_GI_number: 16264072 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 22 462 5 390 407 120 23.0 6e-27 MSNNANVAAAIKEVAHKVFGGYAELLRMPHTARFSIGSVIACMPFPMVGMTITISVQHYY GNYSLAGVLTAIQAIALAVSSPLLGKLVDKFGQRQVSIPTILVWIVAAIALTTSITNRAP VWVLYCLTPFLAAIPPWGAMSRARWTTMLKGDRERTDRALSLSGVFDECMWIIGNPLAST LAVISGLLAFSFTGVCVVIGALMFLTELTTEPKSQTQLAREAGLTREEYRKREAAKAQRM RERDAADRARREAEARGDDEQAVQAAVDRAIADSRAGKKESIWGPGLIAVCVTWFSLGAF QSASNISIIAFATEANMKQYTGFVFACFSFSSLCGALVYGAKNWTIPLWKRFYFCLIVVN LGVGTFMFAKHLWVIMIIYLLIGVCQAPTWINGNQLMLHLVPPTRFTEGVAWMGAMNSIG SSAGSAIAGVFIDHMGSHGGFLMATVLAITSLAIAFVGFRQIKSSTETPTLTEVSV >gi|197324945|gb|DS990229.1| GENE 127 133001 - 133399 120 132 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVMVMPTMGNGMQAITEPMENLAVCGIRSSSAYPPNTLWATSLIAAATLALLDMTASPFR SRLDVPRRRGVAGGALIVLMCCPVGRAKDALHVCVTATLIARRGATRGVDITNASIFITF INDGDISVYQMG >gi|197324945|gb|DS990229.1| GENE 128 133562 - 134221 846 219 aa, chain + ## HITS:1 COG:Rv0525 KEGG:ns NR:ns ## COG: Rv0525 COG0406 # Protein_GI_number: 15607665 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mycobacterium tuberculosis H37Rv # 4 216 5 201 202 129 41.0 6e-30 MPTTTIHFVRHGKVYNPDHLLYERLPGFHLSDRGMRMAQATGAYIAADPRLNTVAAVYSS PLERTCETAGAILDALNPVRAGRGEEPLELITDPRVIEAGNEFRGKRIGHGKGALWRDGN WKLVLNLWKPSWGEPYRHIAERVGAFANEKIREYAGRQIIVVSHESPIWSYRHLLETGHP EHWMFLRKTALASITSITYDSDTGKVMSITYADPAAQVE >gi|197324945|gb|DS990229.1| GENE 129 134476 - 135399 1143 307 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0223 NR:ns ## KEGG: BBIF_0223 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 307 1 307 307 497 100.0 1e-139 MAFQLDATAIAHVSMNPAVRDAAAVGAGLIELWPLTDAKQMDNDTKYGENLQVRMTRMAA RVMTGDDVTVPDAEFVYEGADEIPGRPQRIVDALLAANDAYDEMGDYSETGDTRLIMRGA GQLGVDWDDDTVHAIAEALEAIEQAIGAADGAAGGAAAGAAAPANAAPSADVEAIAQRFA TVTVAADGLLRLIDLRKPSRAVPVMFYVNELCERLSVPRLCFKAEQLSSLMTARSLTNDD EAVLAETVKLFTMVAASEWKRHHDDVLWDAAEAKRLAKEEDERRNKEALAAKFAHVGDDP SKPPVEL >gi|197324945|gb|DS990229.1| GENE 130 135677 - 136462 1061 261 aa, chain - ## HITS:1 COG:CAC1399 KEGG:ns NR:ns ## COG: CAC1399 COG0600 # Protein_GI_number: 15894678 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, permease component # Organism: Clostridium acetobutylicum # 1 225 1 224 250 119 30.0 5e-27 MRTLKSLFARVAPPAVTVGGLLIVWEIAVDAGHISQRVLASPSQIAASIVKTWPDLWEAT AITTYEAITGFLIAAVAGVLIGIGLYVSKTLYRGIYPLLAAAQTIPLITIAPLFMIWFGF EPLGKIVIVAVFGVFPVAVQTCRGMLAVPQFYEDVALTCGATRAWALWHVKLRVAARQVF GGLRISAAYVFGTAVTAEYLGAMNGLGIWLQAAFNSFRTPLIFSATIMVVALTALLLTII SLAERLLLGPDDTIAFNDDGE >gi|197324945|gb|DS990229.1| GENE 131 136725 - 137792 1799 355 aa, chain - ## HITS:1 COG:mll1755 KEGG:ns NR:ns ## COG: mll1755 COG0715 # Protein_GI_number: 13471703 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components # Organism: Mesorhizobium loti # 37 355 25 338 338 177 36.0 2e-44 MKTVKGFSKIVAMVGAVALGLTLSACGNTNSASNTDSKNSGSTPTVSFMLDWTPNTNHIG LYVAQKLGYYKDADVNVKILPTAQAGAETSVENGVANVGFTTLSNVAAFNSQGADLKFVF DLTQKPVARWCALASRTDIKTPKDLSGKTFVSFGSAEQTAVVRQMIKYAGGTGDIKTATA GTNTFETLTSGKGDFGGFYVTWEGVESELNGPKLNCFVASDWGVPGNPDQLGFAVKGSWL KDSANTDALKKFIAATKKGYDYALANPDKAADILVEQAKEAQLDSKLTRTSMEEIAKNNY WTTDDPKSLPGTTNFDDAQPYLEFQYKAGTYKDQDGNDPASAPQAKDLATNEYVG >gi|197324945|gb|DS990229.1| GENE 132 138220 - 138882 695 220 aa, chain + ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 1 187 1 186 231 86 31.0 3e-17 MMKAVFFDLDGTLIDSDPYWVRSQETLVRSCGGEWSDTLADALQGAAFPETVRLLRGAGV DWDGDAIVRHLSDEVLRMEKERLPWIEGVRDVLSGLAAAHVPAVLVTGSPREIVENVMAQ APKGAFVGYVCGNDDVTPKPDPAPYWRAASMVGLPADASGAGQCLVFEDSKPGLTAARAS GATVVAVTGHARVDMSDSGLCDEAIVDYRGLTIADLAGWM >gi|197324945|gb|DS990229.1| GENE 133 139474 - 139947 -112 157 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLVSIPSPQPKLSLILIYRNHWQNANRVSAHSESSHNPYTHVCKRSHAALPVALFTPLSF RRSLPPVNAVRQLLPCWFASQARPSYLSARWILPTIPARDAPPFLLIAHCPPTPCSYMPR SFTPLPSPGFFGTAPYLCCAARPTYVPTLPSLPELRP >gi|197324945|gb|DS990229.1| GENE 134 139984 - 140079 246 31 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNNDQNKVMDQRETREDESQDWATLFAGLAA >gi|197324945|gb|DS990229.1| GENE 135 140337 - 141866 2480 509 aa, chain + ## HITS:1 COG:Cgl1263 KEGG:ns NR:ns ## COG: Cgl1263 COG0008 # Protein_GI_number: 19552513 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Corynebacterium glutamicum # 18 508 4 486 493 583 59.0 1e-166 MTEAEHSKDTKPELPAHVRVRFCPSPTGTPHVGMIRTALFNWAEARATGGKLIFRIEDTD AVRDSEESYNQILESLRWLGIDWDEGIDVGGPHGPYRQSERGDIYKDVAAKLLEAGYAYE SFSTPDEIKERNLAAGRPAEFGYDGYDRDLTEEQKAAFRAEGRKPALRIRMPDEDIAFDD LIRGTIEFKAGSVPDYVIVRPNGDPLYTLTNPVDDAMMDVNVVLRGEDLLSSTPRQIVLY RYLMELGIAKQMPLFGHMPYVMGQGNKKLSKRDPESNLFNHRDNGFIREGLLNYLALLGW SIAPDRDVFSMDEMIAKFDVRDVKANPARFDIDKAISINAEHIRMLEPQDFLNRSVPYLH RDGVVSADNWDALTDREKVVLTASAPLIQPRVRLLGEVAGMVGSLLSTEEYLEPADDARK QLKDSAADVLDAAVAALEGVDEADWKTDNLHETLNKALVEDGGYKPRLAFGPVRVAISGR RVSPPLFESMEIVGKPLTIARLKGLREHL >gi|197324945|gb|DS990229.1| GENE 136 142108 - 142662 341 184 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0206 NR:ns ## KEGG: BBPR_0206 # Name: not_defined # Def: ATPase (AAA+ superfamily)-like protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 184 1 184 184 366 100.0 1e-100 MGQSLAGRMGMLQLPPLSHEEAIQPEPDLTADEFMFRGGYPHLYDASTPNDIYFHDNGLL NYLLGIHSAEELLNDPKRGDVFENLIISQTVKRYLNKNKDGELYFYRDTNQSEIDLVDAT QRRSPTLIEIKSRMTPRPDFFRHLATVGEELGVPVDRRIVVYRGTENFTGKNGRYVTAER YLGR >gi|197324945|gb|DS990229.1| GENE 137 142604 - 142996 332 130 aa, chain - ## HITS:1 COG:MT0627 KEGG:ns NR:ns ## COG: MT0627 COG1373 # Protein_GI_number: 15840000 # Func_class: R General function prediction only # Function: Predicted ATPase (AAA+ superfamily) # Organism: Mycobacterium tuberculosis CDC1551 # 1 107 3 111 411 70 39.0 1e-12 MIPRTVAQELTPMLSWFPVVSVTGPRQSGKSTLIKNMLLDYEYVNLEDETTRISAIDDPV GFIRSHGAKLIIDEAQHAPGLFSQIQVAADERGGMGQYVLSGSQNFLLEKRIGPISGGAH GHASTAAPLA >gi|197324945|gb|DS990229.1| GENE 138 143679 - 143828 88 49 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKLSRKRGLFCFPAHSAGGFVAYRPDPSKIRVEIAEIYYSPCEIAVFEP >gi|197324945|gb|DS990229.1| GENE 139 143958 - 145247 1134 429 aa, chain + ## HITS:1 COG:CAC2806 KEGG:ns NR:ns ## COG: CAC2806 COG1409 # Protein_GI_number: 15896061 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 35 372 33 305 317 100 24.0 5e-21 MTDFNQIAAPASASGPDDERPVSISARLGRLQFHRSGKFRVLQLADIQDGPKVSKDTIRL IEASLDAARPDVAILTGNQIAGYDDAYRDTFRKRQWEPARRGKIERTRAKVRAGISAFLQ PLIDRGIPFAVTYGNHDAQCGLSPAELDALYREFPGCINPPCNMDDSAANPGFLVRSVPS SGLPDQPVAACEPGTFAMPVLDQDRQRAVLGLVVLNSGDYAREGGYGRPSDAALRFVHDV PRWLGVRSLVFQHMPLPQFYDVLKAMPANADNAIQGYRKYDAQYYVLDDDRTLPGGYLGE GVSCPDEDCGEFAALRDTDGYIGVVVGHDHRNGFVGSLNGMMLVATPTCGFGSYGPAAAN RAARLFEFDIRHPYSPRTQLLTFGELVGKPSSNKAYTYAVEGQSNAADGVNLLRKPGLLA GVAAALKKI >gi|197324945|gb|DS990229.1| GENE 140 145395 - 146249 848 284 aa, chain - ## HITS:1 COG:MT3067 KEGG:ns NR:ns ## COG: MT3067 COG1414 # Protein_GI_number: 15842545 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 47 262 38 252 267 187 52.0 2e-47 MTSLTQPLATSMADERQRADDEMHDDGTVTSTMTADAIEYTISGEIHSGVGVLDKTVKIL DALESGPATLGQLVSTTGLARPTAHRLAIALERHRFVLRDQHGRFVLGSRFAELAAAAGE DRLLTAAGPILQTLLDRTGESAQIYRRQGDQRVCIAAVERASGLRDSIPVGAMLSMEAGS AAQILLAWEDSERLHQGLRHAKFTAAKLAAVRKRGWSESVNEREEGVCSISAPIRNASGQ VIAAISISGPSGRMGNSPGRRYAPLVMAAGKYLTDALLKASSVR >gi|197324945|gb|DS990229.1| GENE 141 146524 - 147927 1835 467 aa, chain + ## HITS:1 COG:ML1685 KEGG:ns NR:ns ## COG: ML1685 COG0065 # Protein_GI_number: 15827896 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase large subunit # Organism: Mycobacterium leprae # 4 467 18 484 485 671 69.0 0 MGTTLAEKVWADHLVRQGSDGAPDLLYIDLMLMHEVTSPQAFEGLRLAGRKPRHVDQLIA TEDHNTPTVDIDRPNPDKTSALQLSTLEKNCKEFGVRLHPLGDADQGIVHAFAPILGLTQ PGMTIVCGDSHTSTHGAFGALAFGIGTSEVEHVMATQTLSLKPFKTMAINVNGKLPADAT AKDIILAIIAKIGTGGGQGYVIEYRGEAIRNLTMDERMTVCNMSIEAGARAGMIAPDETT FEYLKGRPHAPEGELWDQAVAYWKTLKTDDDAVFDKVVDIDATKLGPFVTWGTNPGQGLP ITANVPEPDKIADATKRAAAERALTYMGLKPGMPIKDIAVDTVFIGSCTNGRIDDLRQAA SIMKGHHKAENIHRVLVVPASSRVRLQAEKEGLDKVFEDFGAEWRNAGCSMCLGMNPDKL VPGERSISTSNRNFEGRQGKGSRTHLASPAVAAATAIRGTISSPADL >gi|197324945|gb|DS990229.1| GENE 142 148072 - 148764 1088 230 aa, chain + ## HITS:1 COG:Cgl1285 KEGG:ns NR:ns ## COG: Cgl1285 COG0066 # Protein_GI_number: 19552535 # Func_class: E Amino acid transport and metabolism # Function: 3-isopropylmalate dehydratase small subunit # Organism: Corynebacterium glutamicum # 1 198 1 195 197 250 62.0 2e-66 MEKLTTLTGVGVPLRRSNVDTDQIIPAVFLKRVTKSGFDDALFYAWRRDPNFVLNQPEYA GKGQILVAGPEFGIGSSREHAVWALHDYGFRVVIAPSFADIFYGNTAKNGVLAAIMPQES VELLWKLLDEEPGRQMTVDLEQRTVTCGDVTLPFEVGDYVRWRLMNGYDDIDLTLQHEDD IAAYEKMRAEKFPFKPKTIPAKHWAEEPIQSAREPEESDWAGPLSDRGII >gi|197324945|gb|DS990229.1| GENE 143 148923 - 152942 3759 1339 aa, chain + ## HITS:1 COG:CAC3303 KEGG:ns NR:ns ## COG: CAC3303 COG0553 # Protein_GI_number: 15896547 # Func_class: K Transcription; L Replication, recombination and repair # Function: Superfamily II DNA/RNA helicases, SNF2 family # Organism: Clostridium acetobutylicum # 584 1338 385 1076 1077 431 34.0 1e-120 MDWHASVYGSRSGGGQYRDFSDGDADDDGVTYGARGSYADMADDTAGATPLPPSVDDAEL RRLGGNAVFFRAKDVLKSGRMHDMAVSFNVPDSPRTSGTMLTGARANVRLTALVKGADRY ADDYRVSAAIDTDAGKVGQSSCTCPAYGRFRGVCKHVIALVMAYNEHPDDFAAADDGNGS TNGIGRGAAGLVPRQPAVRTTRALDLFMRQQDDERTRRSQSRQLDLLKEIGGLADSGGVA GAAQTARFMPIASVSLRLSLSFSLNSCVAKFRIEVPSRGISYVVKDIASLLQSVKNREFV AYGKKLAFVHSRDAFDERSRNLLDVLSRAQDIRAVINNDNSAYSYYYRRQSDDATLTLSD GEVAELLDTYVGTEDTVEYTAPARFYAPTMRVSVVDGNPDLGLAVERGDDPEASNGSTAA AGYVIRHAQRVERFIEGQRSHYVIARPFSQAESGAGVGSGGRALLSVDRATIYRCDADFA QKRALLSLLCGENDREAMYLSESDVDRFVRTVLPQLVSRQENEAGRSVNAIGASAGPNAE DGSAASSVFDRLVPPAGRETGVPAHGGLIIDVPPELLAKMRVPCRLAFYLDRDRAGVTCD AQAHYGDKHYHVFDGVGVDASMRDKEMERLAVEAMLHYFPRPSGAVAAIPESDDEAIYRL LTEGLAVLRGLGDVMATPAFDGLTAMPRPTISIGLSVKSGLVEISPIADEIDPDDVPGLL ASYRRRRRFHRLRNGSFVDMRNVDMSDVDEIADDLGLRAADLESGSITVPAYEAYYLDHQ VDDDAKDASFTAYLDGLRVIDPSTYRVPAALASVLRPYQVEGFRWLNAVCDKGFGGILAD EMGLGKSVQLLSLLLARHKESRAEHRPNLIVCPASLVYNWVAEVAKHTPELRVEAIAGTK PERRAMLDGVRAAQQDTGVSPTRESARPASAAAASDDVPDVLVTSYDLLRRDIDDYAGLE FYCMTLDEAQYIKNAATKVSKAVRSVTAVHRFALTGTPIENRLSELWSIFDFLMPGMLGS YAHFRERFEMPVLSGDETAQKKLQSFVGPFILRRLKSQVLKDLPDKIENVITVQLQGEQR KLYAALEQQLRSVILSQRPADFNTGKIQILAQLTRLRQVCCDPRLIYENADGHASALSAG VQSAAKDPQQSVKQPVKQSKARKTVSSAKLDAIIELVDSCRDAGRKMLIFSQFTSYLDLI AQRLRADGVEYDMITGATPKKRRLELVDRFNADATPVFLISLKAGNTGLNLTGACVVVHA DPWWNAAAQDQATDRAHRIGQTQDVNVYQIVAKDTIEERILNLQRSKTDLAQRFVDSASS ATGRSMAALTKDDLLALLG >gi|197324945|gb|DS990229.1| GENE 144 153017 - 153397 520 126 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0213 NR:ns ## KEGG: BBPR_0213 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 126 1 126 126 88 100.0 8e-17 MSVRKKLMSVVAAVATAAAMGATGVAANAADVVAVPQEGLSDTGASIAIVVVLVVVLAAI GVGVTVARKRQSATGAHVQGEGEGADESGLVADGADTADTQTVQFDDAAPAADDSDAGSG ESRDSE >gi|197324945|gb|DS990229.1| GENE 145 154289 - 155395 1103 368 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0214 NR:ns ## KEGG: BBPR_0214 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 368 1 368 368 633 100.0 1e-180 MRQPIQSYPPYPSQLYSPYPPYPPYSSARRLVAPPIPVAQPVPIDPVKARRRWLRGTVTR HAGLIFAYQGVFMGVNVLASFVIGIILGLSGAAGRGTLTAESLSAALVQLTGVIMLLTVL GGMGFILPMRRRMIFRRDFWLGEPGHARMKPSWLLTFIILVMAIQTAIVLIQLGFSMFGT TLQSPTSDNISEASTNIWMWLYVGLAAPVAEELVFRGVLMRGLKPLGRNFAIVTSALMFG LFHDDVVQGLFAFGCGLLFGFVAMEYSLVWSIVLHVFNNAVLGGVLPWLAGLFGDAGDTA YTLGLLGVSIIGLIVVLVKYGGGLRAYRRVNRSAPGTYWGWTSPAFLIFVIVNVAITILS FVTAMMGV >gi|197324945|gb|DS990229.1| GENE 146 155522 - 156673 1117 383 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0238 NR:ns ## KEGG: BBIF_0238 # Name: not_defined # Def: dihydroorotate dehydrogenase # Organism: B.bifidum # Pathway: not_defined # 1 383 1 383 383 735 100.0 0 MSDFEPFYNVDLSYEDNYARGPFGEFAAALRGDVPAGEAASPAKSSFLGIPVDLPFGIPA GPLLNERFTTAAFRMGFDIATYKTVRSRAWGCNPFPNVLAVHPTSADGSLTPGSAELDEG VLADTDYRLPISISNSFGVPSRDPDEWQPDMRRAIAAAGPGQVLLPSFQGSRVEGMSGDD YIADHVATARLVCETGADLMEMNTSCPNEGHNRLLCHDPHLVGRITEAVKGEIGDRPLIV KLAYIPPTEVEGGWGPDRRVIDDAALELMVRQTAARGTVQAFSTINTISARLVDANGGQA LPGKGRDRSGVCGSAIRGAGLDMVSRLAAIRERLGLDYAIIGVGGVVAPEDYRAYRAAGA DAVMSATGAMWDAELARKIKADD >gi|197324945|gb|DS990229.1| GENE 147 156952 - 158277 2040 441 aa, chain + ## HITS:1 COG:CT455 KEGG:ns NR:ns ## COG: CT455 COG0766 # Protein_GI_number: 15605182 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine enolpyruvyl transferase # Organism: Chlamydia trachomatis # 9 438 4 432 444 374 46.0 1e-103 MAESENDVLHVVGGKPLNGTIKVRGAKNFVSKAMVAALLAPGKSVLKNVPEIRDVHVVSD LLRLHGVDVEVDGTNGIVNIDATHVQLADVADVDTLSGSSRIPILFSGPLVHRLGEAFIP ALGGCAIGGRPIDFHLETLRKLGATVDKEHKDGIHITAPNGLHGAKIHLPYPSVGATEQT LLAAVLAEGKTELSGAAIEPEIMDLVAVLQKMGAIISVDVDRTFRIEGVKELNGFTHTSL TDRIEAASWASAALATRGDIFVKGATQPEMMTFLNVFRKVGGKFEVTDRGIRFWHPGGDL KPVAIETDVHPGFMTDWQQPLVVALTQANGLSIVHETVYENRFGFTKPLVQMGATIQLYR ECLGSLPCRFQQRNYKHSAVIFGPTPLTGRDIDVPDLRGGFSHLIAALAASGPSNVHGIS LIDRGYADFRGKLAALGADFE >gi|197324945|gb|DS990229.1| GENE 148 158374 - 159717 1442 447 aa, chain - ## HITS:1 COG:TM1336 KEGG:ns NR:ns ## COG: TM1336 COG0477 # Protein_GI_number: 15644089 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Thermotoga maritima # 45 437 2 382 390 109 24.0 1e-23 MPTTPAQPSETQLPAAQHETEQPNTSPEPQPQPQAQPKAAHPLRSRNFILLVAGQGISLF GNMMLRFAMSMWVLDETGSATAFASILAISFVPMILGAPFGGVLADRMNRRTLMVILDAA SAVTVALALVWFSAAGFSIIAVGVMQVALSLLGIFETPTVESALPQMLRQYGDATLNTSA AIVSQVQQVSALIPSFLGGAVYSFFGIRPMMAVSVAAFAGAAAIECFIRLGMPERDEEMP TPLDDLKAALRFLTREKPNLLKMVLLASALNFVVLGYGAVGYAFVIRTQWGFDATVYGIA DGLISVAALMGMLIVTMMAGRLKIGHMTKILTLLGLTVIPQGVACMLSGGNWTRLMALVA FACIGDVICSCANIIAVPAIQMRTPDAMLGKVMALLSALAMCMQPLGQMAYGWAFDHLPA AAIFIASGAVLIAMALLSASLFAHFDD >gi|197324945|gb|DS990229.1| GENE 149 159940 - 160650 878 236 aa, chain - ## HITS:1 COG:SMb20367 KEGG:ns NR:ns ## COG: SMb20367 COG1309 # Protein_GI_number: 16264101 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Sinorhizobium meliloti # 7 161 8 165 230 62 29.0 9e-10 MARNPHPEVTERRILAAAKKLFAEKGYDKTSIQDIIDKLGDLSRGAIYHHFKSKEAILER LNTDDWHASQALCDEIAKRDDMNAMEKLRSLFANSLGDAAHLALVKATVPFFDDPATFTA NMRFWSTELPKNLDPLIEEGQLDGSIPTEYPREVAQLLALLCNYWLMPCFFPATRTQLRY RLQCLATMLDALHAPVFDQHLIDLATDGMMAFAGDGSGSAAEQQDGGGTSPVSDAH >gi|197324945|gb|DS990229.1| GENE 150 160849 - 161772 939 307 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0242 NR:ns ## KEGG: BBIF_0242 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 307 1 307 307 417 98.0 1e-115 MTDPNAGFPTGNNSYGAPQPAQPASDANAAYQQPQYTAPVPPAQPVPPAGAPYQAPATPD YAANIQNSVAGFAQNLGGKNVTVGGQSFDFISIITYVAGVLAIIACIVPFVSAFGYSASL FQGGDGWIVLVAVLAIAALTFFKKHLPAMIISALVLVLSIFEMVYSKIKINSSLDEFGSN YGSLGSLASGYAKNAVAFGIGAYLLIIAALGLIVGTVLAFGNQKKAAKVAAPGVSAQPQY VPTAFPGAPVPAPAAPVSDAGVPQAPTAPQAPTAPVAPTAYEQPAPAAPVYQQPDSDASY PGQTPQA >gi|197324945|gb|DS990229.1| GENE 151 162097 - 162528 713 143 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282316|ref|ZP_03645638.1| 50S ribosomal protein L11 [Bifidobacterium bifidum NCIMB 41171] # 1 143 1 143 143 279 100 3e-73 MAPKKKVSALIKLQIQAGKANPAPPLGPALGSHGVNIMDFCKQYNAQTQDKMGQVIPVEI TVYEDRSFTFILKTPPAAALLLKAAGIQKGTENPLTHKVGSVTKAQLREIAEIKMADLSA RDVEAGMKIIAGTARSMGITVID >gi|197324945|gb|DS990229.1| GENE 152 162543 - 163235 1161 230 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282317|ref|ZP_03645639.1| 50S ribosomal protein L1 [Bifidobacterium bifidum NCIMB 41171] # 1 230 1 230 230 451 100 1e-125 MVKRSKKYREAAEKVDRNNLYTANEAIALLKSMPAYNFDQTVEAVYRLSVDPRKADQLVR GTVNLPHGTGKTAKVAVFARGPKATEAVEAGADIVGDDDLIEKVQNGFLDFDAVVATPDM MGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKNGNLSFLIGKLSF DETALDENFKAVADEVKRLKPATVKGRYITKVTITSTMNPGVPVDPVALA >gi|197324945|gb|DS990229.1| GENE 153 163163 - 163426 336 87 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0245 NR:ns ## KEGG: BBIF_0245 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 8 87 22 101 101 118 90.0 6e-26 MRRQEPPPVSQRLTAPASGGRFTLPPLAVKRSETGESSRESKYGKGASRACGKPPMKVEP IGVDQARATGSTGTPGFIVEVMVTFVM >gi|197324945|gb|DS990229.1| GENE 154 163490 - 164479 1455 329 aa, chain - ## HITS:1 COG:VC0354 KEGG:ns NR:ns ## COG: VC0354 COG0545 # Protein_GI_number: 15640381 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Vibrio cholerae # 218 326 146 249 259 80 40.0 6e-15 MRKLTQTSTFKRVLAAVCTVGLCVTLAACGSGDSGSSSKKSGDDSSQSSDSSALKNMKKI AGITATGTLGEKPKVSFKAPKTVDNNSYAVLQEGNGATIADGDRLCSQGIAISVKDGTEL ASSWEKNTPDCSLVLEKGTVSDAYYELLKGRKLNTTIAYGVNDSNSNGTSYIMALTYVSK SKDLTKATGDEVTDIPSDLPKVTRAKNGKPSINMNGYKGSSKLVSQALIKGKGKEVTNNN TVKVKYTGWLLDGTQFDSSWDKNTTLEADTYSGGNHQVIEGWQQAMVGQTVGSQVLMVIP PNLGYGDTVQGSIPANSTLIFVVDILAAY >gi|197324945|gb|DS990229.1| GENE 155 164570 - 165643 907 357 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0247 NR:ns ## KEGG: BBIF_0247 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 357 1 357 357 568 99.0 1e-160 MKKQTSKERKRDERKSKSAARPTRHARIMRGVVTPILGLLAVACIGLGIMNATYWKPSSQ IAASAAVKGTQYIVTDPGVLPLVDNQVTVSADAGSSDGEVCLALGSNKDVIGWLARQPYV RVTGLNEWTTLATTKVSAQGAAADAGDDAVAFKDSDMWTSVTCGTGTVKAETKVASDSGT VAIIDLGKSSNATVRMNWVRQTLPDFAMPFYFAGGLLALLAVLAASLFAMPPHKRRKRVV SGSAAEKQAEEVAVSQAVAGSVASLKAAVSFKPKSKRRRHAAHRGKPGAGTPAKPEISQP KVVDPGSRNLVADQQNAQAMDQPDDSATSVITASELQTYFARLSQESDDDTKGSSNE >gi|197324945|gb|DS990229.1| GENE 156 165636 - 166649 1220 337 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0225 NR:ns ## KEGG: BBPR_0225 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 337 1 337 337 581 100.0 1e-164 MNKRITTALAATMVCALTLGLAGCEGQVPQTVAPSVKDNEIIDVTVAQEKQIRGKILDVL NQANEAKSADGLAARVSGSQLEIRTAQLNIAQYTQQDVTPLATIPSDVTQVVIPTDNAWP RYIFTVTTTTEDQQAKRLLVMRQESARQNYKLWAVARLLEDVSLPGFAPAKQGNVMGDAN DSNLVMTPKQAVQRYADVLQNNTNSKYAGSFEDDQFRQSLVKQQEESQKGVTQNKGTQQE VFAPVVDQIAVMRSPRGGDLVVAQINSEWTRSMSEGRESLPGSPNEDALFKMTNQKATSS LKATYVNVVAIFVPLAGSDQKVTVVAGDRQAVKVEAQ >gi|197324945|gb|DS990229.1| GENE 157 166886 - 167872 1282 328 aa, chain + ## HITS:1 COG:ML1159 KEGG:ns NR:ns ## COG: ML1159 COG3118 # Protein_GI_number: 15827586 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin domain-containing protein # Organism: Mycobacterium leprae # 13 328 1 301 301 91 28.0 3e-18 MAQQQEFHPGLSLAGAVDLESLKHQVKAEPGQAGGAPAAGGYVIDTTENTFQAMVQTSAT FPILLLLWIPTDDRLFPMARTLGDAVNKLKGQIQLSRIDIVSYPSIAQAFQVQGAPALFA LIGGRPMPILQGLPGDDELKQIVDQVIPKLISVAAQSGVNGTAPYSGDPDSADGDGAGTG DGAGAAAGADVVPPEHQEAHQLAAQGDYAGAAAAYEQVLQANPNDTLAARERAKALLLAR SATADVREVRKAAADRPDDVEAQLAVADVDMIGGQIEDAFSRLLDYLADGHTDQVEPVRE RLLEYFMIPEATDERVKRARRRLATLMY >gi|197324945|gb|DS990229.1| GENE 158 167971 - 168597 543 208 aa, chain - ## HITS:1 COG:all4694 KEGG:ns NR:ns ## COG: all4694 COG2954 # Protein_GI_number: 17232186 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 76 182 45 153 153 62 34.0 7e-10 MDIAMNDFEYERRFFCRALPPELDDGEPMLIVQSYYVHDGNYALRVRLQTHGVRIDMNAD TDPIAVLRQYRDRFTEAFVTVKGPSVGGTRYEAEREIDACIAAELVMRGGCPIIKNRFSA WIGEDGWSLDIFGGANAPLVVAEAERSGPVTNLQIPSFCVTEITDQARFSNDGLASRPFS QWAADFDAELHRDGPRFQTQFGRNRMGL >gi|197324945|gb|DS990229.1| GENE 159 168818 - 168991 56 57 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282323|ref|ZP_03645645.1| ## NR: gi|224282323|ref|ZP_03645645.1| hypothetical protein BbifN4_00684 [Bifidobacterium bifidum NCIMB 41171] # 1 57 1 57 57 96 100.0 7e-19 MEPFFVVYLRFEGVIRDAPDIYLRFEGLVAKYKRYGNRMIPARIRSEYSAYRVLATP >gi|197324945|gb|DS990229.1| GENE 160 169097 - 170113 1339 338 aa, chain - ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 10 337 4 334 335 194 37.0 3e-49 MAGDMKKPRVSEIAKLAGVSTATVSKVINGREGVSSSTRARIEKIMEESGYSKSLVTTKT SQTIELVLTEVMANGINAMIAETTEYVKSMPIGITITQTGRGKRSEESFREILNRNPLGV ILLLSNATEREKTLLRSRNIPFVIIDSIGEGSQDTLGVGIDNWTGGLIATEHLIKLGHQR IGIITGPQNAESAQARYSGYATALRRAGIQLDPELVAYGDYMPERGYECACQLLDLPAAK RPTAIFACNDITALNVYRAARQRGLSLPADLSVVGFDNVYPAQYLYPALTTISQPFDMIA RKAVDMILDARAGSVADHYLILPTRLVVRESTTAPKKS >gi|197324945|gb|DS990229.1| GENE 161 170175 - 170318 68 47 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMVPMLAPSPQWFSMYCVSFPSYTFFRKIITYSRNFLSSISKRFTIV >gi|197324945|gb|DS990229.1| GENE 162 170305 - 170445 93 46 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0252 NR:ns ## KEGG: BBIF_0252 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 46 1 46 46 63 95.0 4e-09 MGTIIGVKTYDLRFSTSSTLSGSDAMNKDPDYPRHTSSSPPTRMTA >gi|197324945|gb|DS990229.1| GENE 163 170663 - 171124 389 153 aa, chain + ## HITS:1 COG:YPO1567 KEGG:ns NR:ns ## COG: YPO1567 COG4948 # Protein_GI_number: 16121837 # Func_class: M Cell wall/membrane/envelope biogenesis; R General function prediction only # Function: L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily # Organism: Yersinia pestis # 3 126 268 391 400 136 50.0 1e-32 MDPIAVATGEQMQNRIMYKQYLQAGSFKVMQIDATRVAGPQEIVLEYLLANKFGVRVCPH AGGVGLCEAVRHFAMFDYLAVSGQWDDRVTEYVDNQHEYFVHPTEIVNGRYKAPTAPGSG VDETRSRRTVPVQGLIAAPRCRGSHGHERNKRH >gi|197324945|gb|DS990229.1| GENE 164 171131 - 171283 131 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282327|ref|ZP_03645649.1| ## NR: gi|224282327|ref|ZP_03645649.1| hypothetical protein BbifN4_00704 [Bifidobacterium bifidum NCIMB 41171] # 1 50 1 50 50 63 100.0 4e-09 MDLHLEGKVVILTGGFKGIGKGIALRLAKEGPSWRLSTETTAPPSSSPPK >gi|197324945|gb|DS990229.1| GENE 165 171229 - 171993 776 254 aa, chain + ## HITS:1 COG:Cj0485 KEGG:ns NR:ns ## COG: Cj0485 COG1028 # Protein_GI_number: 15791849 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Campylobacter jejuni # 17 124 48 155 262 99 42.0 6e-21 MAVINRDDGAAEQFAAEMKAITDNYRTYLMDLNDTDDIAPIVEDVVKTYGHIDGLVNNAD RNDNLDLDHTSWREFEQSLHGNLTHYYELAHRCAPYLRESKGAIVNISSKTALAGQGKTS AYAANLLVFDASKGVHFHDEVFKDTVYFMNNVFCNTSTTPTQWYRKTDALAKAAFSNNDY YEAGGKASDTQPEDKRGLEVDPKFVGFSGGSDTPAGKLAGMAPKPRPTSTRHTPPPSCAW ASTPSRPACSGRRR >gi|197324945|gb|DS990229.1| GENE 166 171990 - 172484 610 164 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0232 NR:ns ## KEGG: BBPR_0232 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 157 7 162 170 259 98.0 3e-68 MSEIQVHNGSGSASSHKPAVAVVNSNFNKQAPETLPEYTVTLDGDKLQSIRWIGSEGNVL SSLDEGDYTVSGEGDKVTVKIAADFLKGKDAGNYGLQFEFASVAPPRKVSLNVTDEAVEP SKPTTPAKPGANEQPKTEGVAKTGSSVPAVAAGTTMIVRKRATR >gi|197324945|gb|DS990229.1| GENE 167 172632 - 173069 731 145 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0233 NR:ns ## KEGG: BBPR_0233 # Name: lnbP # Def: lacto-N-biose phorylase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 145 1 145 750 296 100.0 2e-79 MSTSGRFTIPSESNFAEKTAELARLWGADAVRNSDGTQLDDEVVALGMKVYTAYFPTRAH NEWITLHMDETPQVYLLSKRALAESDTVDVSLMDGFFEEQLKPNFDADPHKYWEVVDRST GAVVPTEQWTVDAEAGVVHVFGAEL >gi|197324945|gb|DS990229.1| GENE 168 173448 - 174884 1953 478 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0256 NR:ns ## KEGG: BBIF_0256 # Name: lnbP1 # Def: lacto-N-biose phosphorylase 2 # Organism: B.bifidum # Pathway: not_defined # 1 478 273 750 750 989 99.0 0 MPRKPQRDWIDFLSHFVRANVKKLASLSHEAGKEAMMFLGDQWIGTEPYKDGFEDLGLDA VVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEAWDNWRKARRAILRS PIARMGYGGYLSLAAKFPKFVDAVEHISDEFRDIHDRTDGEAARGVLNVAILNCWGKMRS WMAYTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLEHGVADDIDVIVTGGPVDT AFSGGSVWAEEPRLAATLRAWVHGGGALIGVGQPSAQQFQGRFFQLADVLGVDEERHQTL SVDKYFPAVTPEHFITADVHLGEGVLQGFLDAGYRKPLSGCGGGQAIGELGGIDFGEPIA DTFPVSEDVTLLRADGGQVQLAVNEYGKGRGVYVSGLPYSAANARLLERALFWASHNEGK YAAYSSSNPECEVAVFDKSGCYCVVNNTDRAQSTYVERGDGRIERIELAPSGIAWRTI >gi|197324945|gb|DS990229.1| GENE 169 175109 - 175498 561 129 aa, chain + ## HITS:1 COG:PH0854 KEGG:ns NR:ns ## COG: PH0854 COG0251 # Protein_GI_number: 14590714 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation initiation inhibitor, yjgF family # Organism: Pyrococcus horikoshii # 6 127 14 134 137 109 45.0 1e-24 MSEKMEAVATSEAPVALGAYSQAVKANGFVFVSGQLGIDPTTGELAGDTAGEQTAQALKN IKQILDTAGTGIEHVVRATIYMKNVEDFKEVDARYADVFIGSVKPARVAIGGNDIPKGAL VEIDAIAVL >gi|197324945|gb|DS990229.1| GENE 170 175672 - 175950 69 92 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139478|ref|ZP_07801671.1| ## NR: gi|313139478|ref|ZP_07801671.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 92 1 92 92 137 100.0 2e-31 MRAETTTVRTYGRKSGLLRPYVRALVVSARTYGRFGSAPNLAPLDSPLSAGVRPTLPLAG LSQSDWGGSHVTRYVESSNVSSKSSPANPPHM >gi|197324945|gb|DS990229.1| GENE 171 176092 - 177153 656 353 aa, chain + ## HITS:1 COG:lin0625_2 KEGG:ns NR:ns ## COG: lin0625_2 COG0584 # Protein_GI_number: 16799700 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Listeria innocua # 59 216 1 151 243 66 27.0 8e-11 MHGREGRGRLSRSVVAVVSVLACIAMLAGLVMGTTHVVGWVFDAIALASPRHRPIVIAHR GDTRHAPENSLASIRAAKQNGADFAEIDVRLTKDGIPVVFHDRRTGRLDAGGRNVLVNSM PLSALQRMIMQQRGMRYSVPTLRQALGDASMSRPGQRRFGLLLDIKTDARYARKVADAVV RVVEDSKYAGNLMVMSANPYAVMVFKSMRPQWHVGLCASGRPDLTQWDDDGTSEARFMDG AARVETVRREVTAKRGGKQRKHPMFRGMRGEAMDFVVFRTRDVTSRLLRNARLRRIPVYV DSVDSYDAANGLLRHGVSGLLGENITPLQQACSSYHGLPEPFSSPDDDDRSQA >gi|197324945|gb|DS990229.1| GENE 172 177223 - 179019 2467 598 aa, chain + ## HITS:1 COG:MT1331 KEGG:ns NR:ns ## COG: MT1331 COG0018 # Protein_GI_number: 15840742 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Arginyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 598 1 550 550 545 50.0 1e-154 MSPEALSELIETIAHDLVAAGKAGTLTDDLIPETAKFAVMRPKDRARGDWASNAAMQLAK KAGMKPRDLAELFAERLTAADGISTVEVAGPGFINITLDSASAAAVVDKVLADGAGYGKN AHLGGKTLNLEFVSANPTGPIHIGGTRWASVGDSMARVLEANGAKVVREYYFNDHGEQIN RFAKSLVAAAHGEETPIDGYKGKYINEIADRVIAEAEADGVDVLSLPRVDGGLDKDGNPL GEGDSEQREEFRKRAVPMMFDEIQRSMKEFRVRFDVWFHENNLYKDGEVDRAIEELRSRG DIFEKDGATWFESTKHGDDKDRVIIKSNGDFAYFAADIAYYWNKRHRAVDPADVAIYMLG ADHHGYIGRMMAMCAAFGDEPGVNMQILIGQLVNVMKNGKPVRMSKRAGNVVTIDDLVEA VGVDAARYSLARTDYNTSVDIDLDLLTSHSNENPVYYVQYAHARSCNVDRNAAAAGIGTE GADLSLLDTEADGEVLAALAQWPATLALAGDQRAPHKVAHYLEDLAGAYHKWYNVERVVP MALTDPEERLDDAAREALRIAKNPEPARAAARLKLNDAVRTVIASGLDLLGVTAPDKM >gi|197324945|gb|DS990229.1| GENE 173 179185 - 180813 1887 542 aa, chain + ## HITS:1 COG:Cgl1154 KEGG:ns NR:ns ## COG: Cgl1154 COG0019 # Protein_GI_number: 19552404 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate decarboxylase # Organism: Corynebacterium glutamicum # 299 540 211 444 445 209 45.0 8e-54 MTGSAVRVDGTQGITPIWPVATAVNAEGALTFHGRTAESLLDEFGSPLYLIDTDEVSARA RYFVRAAADAFTNSTTHVSFAGKAFLSKEVVRLVTDAGMLVDTCSMGEMRIALAAGVPGR RLVLHGNNKSDAEIELAIEQGFAKIVVDEPDEPSRIAAIARRLGKRARVMLRVTAGIHAG GHEYISTAHEDQKFGVPLLPAGADAAALSVLDELTADPAGVTPAVTNAHIAERDGDAGDG NAKPERELHYDMKYPYDLSHEEIPEKDKALAAAMETVADGPALAVLKDILTRSDELELVG IHSHIGSNIHDADAFIQAAKRMMLLRKTFYATDAYTLPEVDLGGGYSVAYTDGEDSMDVR VELRRLAEAVGAINRALGVPAPAISFEPGRWIVAPAGVTLYRVGTIKPVHLSDAKDKTGN PIDERVYVSVDGGMSDNIRPALYGADYTVRLANRRGSDESMLVRVVGMHCESGDIIVHED RLPADLRRGDILAVPVTGAYGRTMASNYNQALIPAVVAVTEAGAHVMIRRQTIDDLLDLD QG >gi|197324945|gb|DS990229.1| GENE 174 180930 - 181436 706 168 aa, chain - ## HITS:1 COG:BS_ptsG_3 KEGG:ns NR:ns ## COG: BS_ptsG_3 COG2190 # Protein_GI_number: 16078453 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIA components # Organism: Bacillus subtilis # 17 156 5 144 156 120 45.0 9e-28 MTAAPAAAAPAPKVKAADNAVLAPVDGAIKPITEVPDETFAAKILGDGFAVVPTSGRVVA PVAGKITTVAQAKHAVGITTPAGVEVLVHIGVDTVQLAGSPFTMMVSEGQQVNAGDALVD VDWNVVKSAGKSTDVIVVFTNPAKIDKLSITAKGAVATGAPIGTIVTK >gi|197324945|gb|DS990229.1| GENE 175 181433 - 183217 2087 594 aa, chain - ## HITS:1 COG:FN1547_1 KEGG:ns NR:ns ## COG: FN1547_1 COG1263 # Protein_GI_number: 19704879 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Fusobacterium nucleatum # 79 481 1 394 411 432 59.0 1e-121 MKHQLLVRLSPYTPAMFPAYLANNLNETRASYRKSHVPLFIEAALLTYSRASDPMVGWYA NGNCGGRKRRPYPQREVGMKAYIQRLGRALMLPVACLPAAALFLGIGYWIDPSGWGGSNV VAAYLCKTGGAILDNLGLLFAVGVAIGMARDKDGASALSALVGFLTVTTIMGSASMFLGF DATKVDTEHPAFAAGAIGNKNVFFGILVGCVAGALYNKFGKTKLPDFLAFFSGRRCVPIL TAAVMSIISLLLLFIWPAVYGALVWFGESIMGLGAVGAGIYAFFNRLLIPTGLHHALNNV FWFNLANINDIGKFWGSADPASGAVIATGGFHPFGVYVTGIYQAGFFPIMMFGLPAGALA IYKNAKPENKKATGSLMLAGALAAFLTGVTEPLEFSFMFAAFPLYVVHALLTAISVFIAA SFQWIAGFNFSAGFIDWFLSLKVPAAHMPWMLIVQGLVFAVIYYFVFDFMIKKFNMKTPG RGDDDNDDASSAAFDTATSSTGDKYADLAGKLYAALGGHDNITEIENCITRLRMGVVDSS KVDVDAIRKTGVPGVKVIDKKNVQIIVGTQVQAVADALSALYGKPVIGGGSPKA >gi|197324945|gb|DS990229.1| GENE 176 183459 - 184772 1882 437 aa, chain + ## HITS:1 COG:Cgl1157 KEGG:ns NR:ns ## COG: Cgl1157 COG0460 # Protein_GI_number: 19552407 # Func_class: E Amino acid transport and metabolism # Function: Homoserine dehydrogenase # Organism: Corynebacterium glutamicum # 9 435 19 442 445 328 48.0 2e-89 MAQLNDNPIRVGLLGAGTVGSQAARLLVEQKDELAARIGRPIELVGVACLDPDEVDFPWI DKSLLTTDTMKVATNADIVVELIGGTTVARTFVMAAIESGASVVTANKALLAKYGPEIYT AAEAKGVDIYFEAAVGGAIPFLLPLRESLAGDKVTSMLGIVNGTTNYILDEMTTKGLQFD DVLKDAQAKGYAEADPTGDIEGYDAANKAAIMATLGFHTNVTIDDVSVEGITKITADDIA AAAAEYKVIKLLAVVENGEAGVSARVYPALIPESHPLASVHGSFNAVFVKAEAADDLMFY GRGAGGAPTASAVVGDVVTEARHIAQGCTGPSIPMYHELPKAPVSASRAAFAVRFLIHDK PGVLAAIAKEFADHGVSINGVNQDLKPTMTDPGYDGEIQQLRIVTHLTDEVTLRETVEAV RTLDFVTGEPSILRVLD >gi|197324945|gb|DS990229.1| GENE 177 184773 - 185018 188 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIIEGEADRVEAGAQIGACSRHADLDLCTDWFHDSLIQRFRPRRRGGEQTIVRSGWFRGN AAKPPPVGFADSPRQRGQATV >gi|197324945|gb|DS990229.1| GENE 178 184920 - 185918 1458 332 aa, chain + ## HITS:1 COG:Cgl1158 KEGG:ns NR:ns ## COG: Cgl1158 COG0083 # Protein_GI_number: 19552408 # Func_class: E Amino acid transport and metabolism # Function: Homoserine kinase # Organism: Corynebacterium glutamicum # 7 293 10 273 309 171 42.0 2e-42 MEPICTQVKVRVPATSANLGSGFDTVGLALDYHDELTFTLSRDPSNRAAQVLIYGEGEDT LPRDETHLVVSTFRKACQTFGLGKVGFILEAHNNIPQARGMGSSAEAIVAGIAAAAAFAQ EDRLNRDSIFELAAAIEGHPDNVAPAVYGGMTVSWNFDTAEGVGSVPIPGGDPLHGGFHT VKYAVDPGVTAAVFVPDYELSTEKAREALPGEVAYRDAVFNVSRVALMAAAMNPRALASG EEPNALLYAATQDRLHQPYRKGLMQPSWDLIQAFRSRGFAAMVSGAGPCVLVLHHGDAVA DIDEVAAEQLASGHWKVLHLPIDTVGVQVERK >gi|197324945|gb|DS990229.1| GENE 179 186031 - 187467 1413 478 aa, chain + ## HITS:1 COG:sll0905 KEGG:ns NR:ns ## COG: sll0905 COG0424 # Protein_GI_number: 16331017 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Nucleotide-binding protein implicated in inhibition of septum formation # Organism: Synechocystis # 142 288 41 195 195 123 40.0 1e-27 MSIPMILASKSQPRRDVLYAAGICPTIRVSHVDEPAALEKAAAGRGVTVDQLNVEQRVMI LAEAKAQAVHQAYRDVADAAASATGERVIAYPLQAAELRGEMNVADIPRQSGAPLDYSKA PIAMTRDFSGVDMPTVTEPISNVIAMQPGLTRASSGPLIVGCDSMFLFDGECYGKPHSVE VARERLHRMSGATGELWTGHCVIDFASGRVERGASHAVVRFGEFSDRDIERYIATGEPLE VAGSFTLEGFGGAFIDGIDGDPHGIIGISLPLLRRLVVKLGVDWTDLWNVARGESAPEDK TGGSGVVPPKENVHQPGDGWIDCACRRKHWGLNGASGVLLARRDPKSGEVTSVVMQHRAA WSAEGGTWGIPGGATADGESPIEGALRESYEEANITPEDIEVVGSYREDHGPWAYTTVFA FEKPGHRVVPRANDDESMEIEWVPIDEVPDRKLLTAMRTDWPRFAERLHALAAAARCS >gi|197324945|gb|DS990229.1| GENE 180 187471 - 187851 123 126 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0244 NR:ns ## KEGG: BBPR_0244 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 126 1 126 126 249 97.0 3e-65 MAADYALLEQAIAIISSVRGLYMDPDALADDVILLAYIWPDEGEFKMAVARVHRTLTQLV EGNVEGSPLKYGFSGWRSFHFQHRRGQQSRADTRIVYMPLDTGIRVKGFANRHLPSDIYQ RLAQLQ >gi|197324945|gb|DS990229.1| GENE 181 187851 - 188213 461 120 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0267 NR:ns ## KEGG: BBIF_0267 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 120 4 123 123 195 100.0 5e-49 MDIKERAEALREISTPGSRIGLTELSRSNAWRKALEQRGLLEIVDRADTAGYLVSVDSLN EMLDVINALESEVERLTIQQMFTARGDKEQWETGSELSQSAQESLKRRKEKIHAFLDGGR >gi|197324945|gb|DS990229.1| GENE 182 188265 - 188462 181 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLAANRFSPHPEGLGEESGGTTLSAHRASVIAGPEGLSRSETKAPSRSSAVRLGSREYI LHYIM >gi|197324945|gb|DS990229.1| GENE 183 188430 - 189467 1007 345 aa, chain + ## HITS:1 COG:AF1469 KEGG:ns NR:ns ## COG: AF1469 COG1136 # Protein_GI_number: 11499064 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Archaeoglobus fulgidus # 102 303 22 223 226 191 46.0 2e-48 MRGEPVRRKAHTAARWPVACRLRNLGGMNTATSQSQSRARSQSWTPVIEARDLVMDYTAG MARVQADHSVTGVMPRGAGTGGPHPYAAGGTGYAMPAVHTLALNHVNFDLAPGETVAVMG PSGSGKSTLLHALAGIIRPTSGTVTFQGANLTAMSDADRTKLRRGAFGFVFQSGQLLPEL PAVENIALPMMLDGADYRSATDAAMLWLERLGLRQLASQRPGEMSGGQMQRIAIARALAV QPAVVFADEPTGALDQATGREVMSILMEAARDNGAAVVIVTHDPNVAGFCGRTMTMQDGR LSQTAEAGLAPAGGVRHPQADWGRPESAEPPSVSLHPAVPAGGAQ >gi|197324945|gb|DS990229.1| GENE 184 189464 - 190918 1509 484 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0269 NR:ns ## KEGG: BBIF_0269 # Name: not_defined # Def: permease # Organism: B.bifidum # Pathway: not_defined # 1 484 1 484 484 804 100.0 0 MSTFALWRLFHRPGRRGGSGHTSALAIVAFAAATAIFLTVLGGVHGFIWRASADHTLKCL IDRSTCAPGTWAVWAGRLKDQHDWAQYASTYVMLAAFACILLIVPFVALAGSAARLAASR RDARLAALRLAGATTSQVTRLTALDAAGQALIGALIGIVGYFAIMPLIMLLNFQDQRFTF EQLWVGSLSLIVVLVVVTVLALISALLTLRRVAITPLGVTARTAQPLPTKWRVIVFLVVL VAAIVLFKNPQGLLHYGEVTMYAVIIGFIALCFALVNLIGSWVVTARARLRSRRPKDAAT MIAMRRILDNPKRAWRNVSGIALAVFIAGITSICGFIGASSTAPVEGVPEPGLAFIRDIG TGGLLTLGFAAVLAAVSSGVMQAGSVYDQVSEYRMLVLEGTDVKTLNRARFIEVLTPLNT VVAVAGGCSMLLMFPLFAASMTKPATLLSFFGGIALCYALVSVGAFASNRVAASLNLTDW RADD >gi|197324945|gb|DS990229.1| GENE 185 190993 - 191937 1289 314 aa, chain - ## HITS:1 COG:Cgl2335 KEGG:ns NR:ns ## COG: Cgl2335 COG0679 # Protein_GI_number: 19553585 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 8 313 5 308 310 172 37.0 9e-43 MPGLLNAMEGFCVIGIVIGVGYVAARMRIGGPSAQMVLNRFSFFVSSPCLMFAILSKEPI FEIFHSSIIVAFFSAVLVGALFLVLNKLFFHLGPADATVGALNSLYLNSNNIGLPIATYI LGNGALVAPILVMQQAIFTPVGLTVLDVTTKGKVSVKEILKQPLHQPLLIGSLGGILVSA IDAKIGWFPVPNFIFDPIDMIGDSAVPMILMAFGMSLHGTKPLQQKGDRPAIFTVAVLKN IVMPIIAFLLSYFVMGFRGATLYACVVLAALPTGQNVYNYAARYNVGLTFARDGILMSTM TSPIFIAVIAALLS >gi|197324945|gb|DS990229.1| GENE 186 191986 - 193410 1410 474 aa, chain + ## HITS:1 COG:ML1059 KEGG:ns NR:ns ## COG: ML1059 COG0624 # Protein_GI_number: 15827516 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium leprae # 94 472 11 354 354 271 44.0 2e-72 MCFARFCLITQAKPVSRATVARHAARRALVLAADGEFGRLIPSRQRAPTGRAAVRMVSMT TTTTMAAAGADPRSAIAPITCDTTGTREKALASLLEQIMDSYSVSDDEKPLADAVEAFLR SKPHLTVHRHGDTVVASTSLGRPRRVVLAGHLDTVPVIDNFPPRWLAPGDPLIREDVAAA HPGERVMWGRGATDMKASDAVFLYLAATLVDPQYDLTYVFYDHEEVAAEKNGLRKVAEAH PDWLAGDFAIIGEPTDCGIEGGCNGTMRFDVVTHGVAAHSARAWMGENAIHKAADVLNRL NSYEPRTITVDGLDYREGLNATLISGGKGTNVIPDECRVHVNYRFAPDKTLPQAKALMMG ADAGAELGNGEHVATGGVFEGFGIEMKDESPSARPGMDAPMAVSLAKLVRERTGREPLAK LGWTDVARFSLLGVPAVNLGAGSPLLAHKHDEQIAESELATMAGILEDWLTGRA >gi|197324945|gb|DS990229.1| GENE 187 193890 - 196757 3226 955 aa, chain + ## HITS:1 COG:ML1468 KEGG:ns NR:ns ## COG: ML1468 COG1530 # Protein_GI_number: 15827770 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonucleases G and E # Organism: Mycobacterium leprae # 433 953 268 807 924 489 56.0 1e-138 MPSVNDNGFSRDETEEQQPTHADAAQSPDSADKTPAAPRRRRGGRRVVRGAGAAGAAVAL KVEDHSAPLFAEPVVEQPLTRRRRSKAADESPETAASADSEKKDDARHAKADGKSRSASR SSKATKRHDDDADQAEPRRTRVRRRTAMFSSREDASPAVPGEPSDDDLGVDTGTDIIVRD DSADLSRALDVVSTLPQPAPRAHAMTSVLFQEPVLPVPEIVRDARDDDREDDDRDSRGGG KSRRSRNGRVSRDGAQGDKDKSASSRRDIDGLSHIERVDSFDTDDSRSRDESGEADEPVR SSRRNRRLNAQERRAAAEVEQIEEDLELDGISYTPVDDEEPSEDSGTRSRRRRRSRQNRA DDSRGNGESDSSQSAAQQDEPAKPSSRRTRDEEEDDDSNVTRRRRRRRSRASDEQGDDEM TVRRSRKQQYIDEITDVEGSTRLEAKKQRRRDNRRERSRQSQLVEQDFLARREHVNRLMV VRERGHHTQISVIEDNVLVEHYVSDIQEVATVGNIYLGRVQNVLPSMEAAFVDIGQSRNG VLYAGEVNWDATRLEGQPRRIELAFKSGDPVLVQVTKDPIGHKGARLTSQVTLAGRFLVL VPSGGMTGVSRKLSERERSRLKGIVSKIAPKDMGVIIRTAAEGAKEEAIVKDLESLVRQW ERINAKREEFWHGKRPKLLQGEPDVAIRVVRDIFNDNFGELIVEGDKVYERIEEYLDTMA PDLKEKLSKWDPSEHQGKDVFDKWQIDAQLRKGMERQVYLPSGGSIVIDRTEAMTTIDVN TGRFIGRGKSLEETVTRCNLEAAEEIARQLRLRDIGGMVMIDFVDMVMPANRDLVLRRLV ECLARDRTKHQVAEVTSLGLVQMTRKRIGQGLVEAFSEECPTCHGRGFILHDEPTVSADY DDPYALKGGDPFIKTNKHGRGTDVQVPQGSSPDIKAKLAQIAAAAVAANGTDEDE >gi|197324945|gb|DS990229.1| GENE 188 196924 - 197232 502 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282349|ref|ZP_03645671.1| 50S ribosomal protein L21 [Bifidobacterium bifidum NCIMB 41171] # 1 102 1 102 102 197 100 9e-49 MYAIVKAGGHQEKVEVGDVILVNRLEAKKGETVEFPVALVVDGAKVTLGAKDLAAVSAKG EVIDDEAKGPKINIMKYKNKTGVTRRKGHRQKLTAVKITAIA >gi|197324945|gb|DS990229.1| GENE 189 197257 - 197508 430 83 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282350|ref|ZP_03645672.1| 50S ribosomal protein L27 [Bifidobacterium bifidum NCIMB 41171] # 1 83 1 83 83 170 100 2e-40 MAHKKGASSSRNGRDSKPQYLGVKKFGGEAVVAGNIIIRQRGTNFHPGQNVGMGKDHTLF ALTDGSVKFGVRHDRKVVDVIAA >gi|197324945|gb|DS990229.1| GENE 190 197495 - 197713 73 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRCTRGGWGGSSESDVVPGEGGVTSHGTGVTALWGCAVRCGHAGNALGRQTKSRTRVGC GLTLNAVLLRRR >gi|197324945|gb|DS990229.1| GENE 191 197956 - 199017 570 353 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0254 NR:ns ## KEGG: BBPR_0254 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 353 15 367 367 706 99.0 0 MDALHSTVCSAIIRISRRNRLIANSQMSRAQTPYTWHMGTHHSLDRLFAVARQERRCAIP STNTDIQAIRRRVKTGAVLRVFRGLYAEPAYWESLDPHEQVRHIVRALAIQHPDWVFCGP TAAIMHGLDCSYRLAFPICIVASPGAHHQDTRHISHHAITHPDITVVQGVKVISLLQTLF DLAACQPLRYALGPADCALRNGLVSESVLRAYPSSVKYSRNRAAVERAFALADRRAENGG ESEARGMLHDAGCPPDDIQVEFPCLDHPGRKHRSDFLWKREDGSVIVGEFDGVRKYVDPH MTSGREIREVVDEERKRQQCMSQYAIGMVRMYYRDLDNPGRIVRQLRDMGIQP >gi|197324945|gb|DS990229.1| GENE 192 198983 - 199219 115 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEHTVECKASIRLRIGGDGPHSRVMCRALSSCIVFRASCVVPPCVPSGTVPPSSGTTSL SEEPPPPSSGTPVHYGVK >gi|197324945|gb|DS990229.1| GENE 193 199439 - 201124 2258 561 aa, chain + ## HITS:1 COG:Rv2440c KEGG:ns NR:ns ## COG: Rv2440c COG0536 # Protein_GI_number: 15609577 # Func_class: R General function prediction only # Function: Predicted GTPase # Organism: Mycobacterium tuberculosis H37Rv # 1 509 1 476 479 432 54.0 1e-121 MSDFVDRVTVHVKGGDGGNGSAGIRREKYKPLAGPNGGNGGNGGSVVFVADTNATSLLDY RFMPHRNAGDGTMGLGDVKDGSKGADLILPVPLGTVIFAAVGAQGRPKRPGEQLADLRHN GDKFVAAAGGAGGLGNAALANKTRRAPGFALLGEPGEERDVILELKSIADVALVGFPSAG KSSLIAAMSAAKPKIADYPFTTLVPNLGVVVAGDHRYTIADVPGLIPGASQGKGLGLEFL RHIERTEIIAHVIDCATLEPGRDPVSDYHALEHELAEYADKLELPLGAIPIPERPRIIVL NKVDVPEAKELADFVRPDFERMGLKVFEISTASHEGLKELNFALAAMVADMRQEVASREQ AEEEARVVINPLEDRSNRRRAAANGTADFAVARKEGDGGFWYEVTGAKPERWVVQTNFDN DEAVGYLADRLAKLGVEDELRRLGAKPGDEVRIGKGQRAVSFDWDPTIAAGAEMLDGAQL GARGRDLRLEDQEPGGRRRTNAERRRQYHEMMDAKAAVREAMMAERQAGHWADPSVDDDR HDEQSLFGRGEDGDENDGGLA >gi|197324945|gb|DS990229.1| GENE 194 201317 - 202447 1206 376 aa, chain + ## HITS:1 COG:MT2515 KEGG:ns NR:ns ## COG: MT2515 COG0263 # Protein_GI_number: 15841961 # Func_class: E Amino acid transport and metabolism # Function: Glutamate 5-kinase # Organism: Mycobacterium tuberculosis CDC1551 # 9 376 6 368 376 270 50.0 4e-72 MSVTESDVRRAIAGARTMVVKVGSSSLTQPSGHLDVKKLNSLVAALSAASAQGARVVLVS SGAIAAGFGPLGFESRPSDVATQQAVAAVGQGLLMAQYEAAFGRFGVRVGQILITAEDTI RAVQYRNVQRTLNRLLELGVVPIVNENDSLASNEIRFGDNDRLSALVANLVRADALVLLT DVDGLYTAPPSTPGARRIGFVPNVIDTIGDVQVAGSSSGVGTGGMVTKLDAARVAAVSGI PAVLTSATNTGPALMGDPVGTVFAPVKHRGSSRRLWIGFASDPRGALVADAGAAKAVRGG RASLLAAGVVEVHGEFSAGDPVWIDDEAGAHLARGLAGFDSEEIPQMLGRNTAQLRRFLG DEFAHPVVHRDNLVLV >gi|197324945|gb|DS990229.1| GENE 195 202520 - 203740 1671 406 aa, chain + ## HITS:1 COG:BS_aspB KEGG:ns NR:ns ## COG: BS_aspB COG0436 # Protein_GI_number: 16079294 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Bacillus subtilis # 12 405 3 389 393 336 43.0 5e-92 MDGMTMADWQTFSDRINNVAPSATLAVDSKAKAMKAAGVDVIGFGAGEPDFPTPADVVDA AVKACNDPRNYKYTPTAGLPELREAIAAKVLRDSGYEVTADQVVVTNGGKQAVYESFQVL LNDGDEVIIPTPFWTSYPEAVKLAGGKPVEVFAGADRGFEPDIAAIEAARTERTKAIIIT SPNNPTGAVWSREAIRAIGEWAVEHHVWVISDEIYEHLNYDGAKTAYVGVEVPECRDQLL VLNGVAKTYAMPGWRVGWMVAPAPVAKAVAKLQGHLSSNVSNVPQRAALAAVAGSLDEVH MMREAFDARRKAIVAALNDIPGVHCPTPTGAFYAFPDVTGLLGKPLGENGTVVNTSSELA AALLDEAHVAAVPGEAFGAPGYLRFSYALADDQLAEGMRRFRRWVG >gi|197324945|gb|DS990229.1| GENE 196 204002 - 204256 439 84 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0279 NR:ns ## KEGG: BBIF_0279 # Name: secE # Def: preprotein translocase, SecE subunit # Organism: B.bifidum # Pathway: Protein export [PATH:bbi03060]; Bacterial secretion system [PATH:bbi03070] # 10 84 1 75 75 123 100.0 3e-27 MQPTHKRMNMAKASKAEKAVKPNVFMRIGLFIKQIIDELRKVVTPTAKELFFWSLGVFIF VVLLMLLVTGMDFGLGKLVLWVFG >gi|197324945|gb|DS990229.1| GENE 197 204286 - 205128 1131 280 aa, chain + ## HITS:1 COG:ML1906 KEGG:ns NR:ns ## COG: ML1906 COG0250 # Protein_GI_number: 15828020 # Func_class: K Transcription # Function: Transcription antiterminator # Organism: Mycobacterium leprae # 60 279 7 228 228 165 42.0 1e-40 MTDEVNLDNLDALADLPDSADTAVEADPVADAAVDSINDNAEEQPVAAEDAVESGTAEND AEASGDADEQESEELDAGAKAVEEFSKSLRTLEGKWYVLHTYSGYEKRVKTNVESRVVSF GLEDKIFQIEVPMEEVDKHTDKGKKVITRVRVPGYVLIRMWPDEDARRIVRETEGVTGFV GPTKDPAPLSRKEVVAMLAPMIASEALKKAGDKPAAAKKRVVEVSYAVGDQVTVIDGPFA TMAAVVSDVEPTTQKLTVLVSIFGRDTPVELGFHQVEKLQ >gi|197324945|gb|DS990229.1| GENE 198 205234 - 206118 820 294 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0281 NR:ns ## KEGG: BBIF_0281 # Name: not_defined # Def: phospholipid/glycerol acyltransferase # Organism: B.bifidum # Pathway: not_defined # 1 294 1 294 294 576 100.0 1e-163 MASKGKPSPRSAVKPLSNAQVSRLAKAHTLVDPMHDLPTGPDRTINEAEIAAQNPKGTSR LLKGVDVVFRASCRTYAWGLDNIPETGPFITAATHVTMFDVFVPMASLFHMGRRPRYMAK AEMAHWPLIGKWFQIVGMQPVQRRSGKARAIEETSVEILTSGRPLTVWPEGTVTRDPKKW PMSMKNGVGVIALEASRRLGYQVPLFCAVTWGAASINHWWPWPRKNVVMCYDAQLDYADL LVDSESWGDEPPVELADELTRRVRVRMTQVMAEIRGERAPSGYWDYRTMSRVTD >gi|197324945|gb|DS990229.1| GENE 199 206239 - 207234 1272 331 aa, chain + ## HITS:1 COG:Cgl1288 KEGG:ns NR:ns ## COG: Cgl1288 COG0240 # Protein_GI_number: 19552538 # Func_class: C Energy production and conversion # Function: Glycerol-3-phosphate dehydrogenase # Organism: Corynebacterium glutamicum # 4 325 5 326 332 267 47.0 2e-71 MKCTVLGAGAWGTTFGQVMADAGNDVTMWAIEPEIVEGIRDRHHNAVRLPSVAKLPDNMT ATGDRAQAVKDADIIVVAIAAQFARVALAEFKDLIPDTAVVVSLMKGIERNTKKRMDEVV REALDLPAERFAAVSGPNLSKEIADRQPAATVVACENLDNARKVASACTTSYFKAFITSD VIGLEMCGSLKNVVALAVGMARGAGYGENTAAMIETRGLAELTALGKAAGADPKTFAGLA GVGDLTATCGSPLSRNYTFGANLGKGLSVEEATKVSNGVAEGVPTTDAVVALGDELDVPT PLAYAMSRVLNEGISCQQMLSELLGTEITEE >gi|197324945|gb|DS990229.1| GENE 200 207470 - 208615 1473 381 aa, chain + ## HITS:1 COG:STM0380 KEGG:ns NR:ns ## COG: STM0380 COG1181 # Protein_GI_number: 16763760 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanine-D-alanine ligase and related ATP-grasp enzymes # Organism: Salmonella typhimurium LT2 # 5 380 2 351 364 276 41.0 4e-74 MAETAKIRVVVMYGGKADEHSISCISTAGVLRALDTDRFEPVPVGITKQGQWIVDGEDPR GWDMADGLPVVEKTPGSRDVVLDVVLGQDGFFARNDDGTLSSLGHVDAVLPVLHGPYGED GTIQGLLEMMDVPYVGCGVLASAACMDKHYTKVLLAAAGIPVAPGITVDARGFDAASRFA ADADGLLARVEEAGLAYPLFVKPSRAGSSFGVTKVEHAGDAAELAAAVFEASHHDWRILI EQGIDAREIECAVLCPKAGSEPQASWPGEIVLDKRNSGDDQFYDFDSKYMDSSASHVEVP ANLPQETLQQVRETAVKAFKAVDGAGLSRVDTFVTPDGEVMVNEINTMPGFTPISMYPKA WEATGIGYTELITKLIDGVLR >gi|197324945|gb|DS990229.1| GENE 201 208645 - 209676 1183 343 aa, chain + ## HITS:1 COG:CC2157 KEGG:ns NR:ns ## COG: CC2157 COG0584 # Protein_GI_number: 16126396 # Func_class: C Energy production and conversion # Function: Glycerophosphoryl diester phosphodiesterase # Organism: Caulobacter vibrioides # 91 338 35 255 257 105 32.0 9e-23 MGKHVGGKLVLAGAVAAGAAVWAIKPRSFSDKQRHFVPSVPDVWYAHRGLHDAGSGLTPE YAAHSGEYVALARRCALCAGYGTADFSGSIAPENSLAAFAAACEAGFGIELDVQLTKDGR VVVVHDDNLLRVAGDPRKIADLTYEELSRIPLFPAPAKPGDAEAAPVADPVAAAQFAPQG YYQHVPLFVDVLRVIAGRVPVIVEYKFTDNAAWGERADELMEKGDQLLQAYDGPYVIESF HPGAVNWYKEHRPGVCRGQLAEPASLTGTGAKEWLAGLLAFDWISRPDFVAFDWHGGPSP QLRAARWMGAIPVSWTVRSADELAECDQYFDRHIFESFVPDSK >gi|197324945|gb|DS990229.1| GENE 202 209689 - 209832 109 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRAPVAKRLGALASVSARRNDKCAHLRTQTDPFASVSAQDRRFGANI >gi|197324945|gb|DS990229.1| GENE 203 210177 - 215972 9123 1931 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0285 NR:ns ## KEGG: BBIF_0285 # Name: not_defined # Def: hypothetical protein containing multiple sugar recognition domains # Organism: B.bifidum # Pathway: not_defined # 1 1931 1 1931 1931 3344 99.0 0 MRKRVVSVALAVALAVAPLGVGGTASAAPLSASDLQTLALRSAASSNDANANDVATVADD AAVNGWTIDRNTAKGGEILAAGTGDYAGWTHFKSTSANGNATSSSGYPAVAISGKTIDLT RAGEFSIKVKSPQAGSANRFGFYLGYKDPGNALFLGYDKGGWFWQKYVGGNGDWYNGTRV AAPAANAEITVNVSWTAAKVATLTIDGQKAFDVDYSSMTALTDKLAMKAGSYSGTSEVTD VYFKDFTVGEVAKHNVTGKVVDASGAAIAGAAVVTGKNSATTAADGTFTLTGLAAGDYTL TVSAEGYDDATKTVTVADGNASVGNITLNKSAEVATETLSTAAMDVRVKKNFPSVYDYTM KKLDGKIMYGQPKDVRVITINGTDVTLKDSDVTFKKVSATEAQYTLNVKSGDKINAVVTV QIKVVDNTLKLNVTKIVNKADDAKTEAEENPVQTIAFPNQSLISVRSGQDGAQFTGARMS SDTARPGDTNFDITADTTVSNANDYTYGFVSGNGLSAGLWSNSEHDGTTVGNTVAGGARN TRVLTSTQKVGKATSFGLGTAPWYYHRVVTDTKKNTYTVEETDMPKMAVAIAGDENEDGT VNWEDGAIAYRDIMNNPYKSEEVPELVAWRIAMNFGSQAQNPFLTTLDNVKKVALNTDGL GQSVLLKGYGNEGHDSGHPDYGDINTRAGGAADMNTLMEKGTKYGARFGVHVNASEMYPE AKAFSEDMVRRNSSGGLSYGWNWLDQSIGIDGIYDLASGMRKSRFADLKSKVGDNMDFIY LDVWGNNTSGAEDSWETRKMSQMINQNGWRMTTEWGAGNEYDATFQHWAADLTYGGSAMK GENSQVMRFLRNHQKDSWVGDYPSYGQAANAPLLGGYSMKDFEGWQGRNDYAAYIRNLYT HDVSTKFIQHFKVVRWVNSPLDATSVKDASVNNGNEQITLKDDHGNVVVLSRGSNDTNNT AYRNRTITLNGITVASGAVSPGNSNTVKGTESYLLPWLWDVNTGKLVKSSDEKLYHWNTQ GGTTEWTLPKDWQNLASVKVYQLTDQGKTNEKTVAVSGGKISLTAEAETPYVVTKGSEKQ ISVKWSEGMHVVDAGFNGGQNTLKDNWAVSGTGKAEVEGTNNAMLRLTGDVKVSQKLTDL TAGKRYAIYVGVDNRTNSPAKITVTNGTKVLATNETGKSIAKNYIKAYGHNTYSNTEGGS SYFQNMYVWFVAPESGDVKVTLSHSGACDNTDHVYFDDVRVLENGYKGLTLNADGTLKTL TNDFEDNAQGIWPFVVSGSEGVEDNRIHLSELHDPFTQAGWDVKKMDDVLDGKWSVKANG LIQKGTLIYQTIPQNVKLEPGETYKVSFKYQSGSDDIYAIATGDGEYNASTVKLTNLKKA LGEDGTAEFEITGSITGDSWFGIYSTSTAPDLQNTSDSAADFGGYKDFVLDDLKVEHVAS AEHTKADAEAKLKEVKDTYDGKSGDYSAEVWTTYVNTVAEIEALIAKDKPDYTTAYNKAV ALAEYMKNAPGDDSNDAYDVATDAYTVEAGSQQALSGGNEGPASLAQDGNAGTHWHTSWS ANAVSAGTAWYQFNLNEPTTIDGLRYMARSGGANANGKIKKYKITLTLSDGTTKDVVTNG TFTTTSGVWQKVKFDAVKNVTKVRITALETAGQSAGEVNTYASAAELRVTTVRDVPSTEV KVNKCDLQNLYDDASALTEATYTADTWKVLVAKRDAAKKVLDDENATAHDVALAYQNLKD AIAALEERVDTSKLAGLVADAEKLKESAYTKDSWAAFKKALDAAKAVLNNANATKADVDA AYNALNAAMKALKPASSKPTPNPETTDKSKLQATIDQAKALDLSGYTKKSAQAVRDALAK AQSVLADDNATQADIDAAQKALADAIAALEKADANGNAISKTGANVAVIGMAGMMLVAAA GAVFIARKRAE >gi|197324945|gb|DS990229.1| GENE 204 216107 - 217120 1456 337 aa, chain - ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 11 325 10 323 325 392 60.0 1e-109 MSAILEGTPDKRLALVTGRAYPELANEVAQYLGINVLPTTAYDFANGEMYVRFAEPVRGA DVFVLQCHTNPINKWVMEQLLMIDALKRASAKSITVVAPFLGYSRQDKKHQGREPITARL MFDLFRTAGANRLVTVDLHAAQEQGFFDGPVDHLTAMPVLIDYVRSHVPMDKATIVSPDA GRIKVSEQWAAKLGGLPLAFIHKTRDITRPNHAEAHGIIGDVQGRDCVVVDDMIDTAGTI CEAVRTLRNSGAASVTLVATHGLLSGPAVERLRDCGAREIILMDTVPVPQEKRLDNMTVL SVAPLLAAGIRSVFEEGSVATLLEGLPEDMRPRNIYA >gi|197324945|gb|DS990229.1| GENE 205 217311 - 220520 3305 1069 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0287 NR:ns ## KEGG: BBIF_0287 # Name: not_defined # Def: hypothetical protein, UPF0547 family # Organism: B.bifidum # Pathway: not_defined # 1 1069 1 1067 1067 1547 97.0 0 MICPHCGATLSSAARFCTQCGQTLAVAAANSNDNVEDSTVLGTAPHGTAAAPQPEAPAPV AAFPEPVPAPQAAAPQPEPAPAFPGAEQPAAEPAFPAVPEPVPAQEAPAAPVPAAEVPVA APAGEVPAAAPVAAAAPAPGTFAAPAPGAPVPGAPVPVTPGAPGAPVQPGAPQQFVPNPM FKELFSARSLQTAAISLAFGLIGAMALALIGSIFFLSAGSSWASKLSMVPGLSHMMSDAS GSGTVTPNFFQFLILVMVLGVSGQLSPNITGGNLSMSSFGVSGHLWMPVGLSGVALVLGT AFGAYWFARKFAIRFKWTGIISSVIVGVVMGFVYLILAAIFPLTLGAGSMGGMGGIQAKA ILTGVSARTYFMTLLLAAIGAFFGYLLAQYASDSNNVFTAAWKWAHRTRGFVRTLLDAAF IYAVVFTVIGFICLIMLSSNLHNGQMFMLFPILLPYLSFLTFALGSFGAVGITASGNIAN LSLFGISNQYVGSISAPWQLWLVFVAFLITTFYIALRAAARNIYDPAYAGWQHSWKSPVA TLVIWLIVTFLFTSATLGYTMQSDTYDASLNIAAWYFLVAAVWSFLIEVVALTFGPAMVL SMGGAWKLFVGGTVRPTPAEVTAYAAACGAHFGRFPSQVAAAAGYTGPQPSFGGQPGAGT GAPTAPAAGIPVQGVPVQGVPVQGVPVPGAPVQGVPAAGTDAAAFQAQGGAPTVQVPAGA PAAAPVAPVPVAAPAAPAAAKAMTPQQKKLAIIISAIVGVLALLGIAYAVVNSTVFSADN TVKSYLSAIASGDYDKANGISDPQVANGKRTLLTNAASKGDKTTISNQRIISATDNADGS RTMRISYTLGGKSMTDTLTVAPNGSKFLIFKNWNITTPLVKEISVYASPAITNFTVNGVK VGAKNATASDSGTYTFNVYPGSYTVKPVTSKYLTADSTTLTTSSESSASISAEPTDALAD EINAKIKDKLDTCAKSTDAQPEGCPFSMYGSDDDYRNIAWNITEYPTVTTDDLSIDSGSF YVYGGEAKVAYEYKNYDDSWEPTDSSTSFSISGQFTLDGDKLDITLDED >gi|197324945|gb|DS990229.1| GENE 206 220701 - 221429 697 242 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0288 NR:ns ## KEGG: BBIF_0288 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 242 1 242 242 455 99.0 1e-127 MQIGVRMGHIPASRRTVTMAIAVIAVITLSIAMLCGCGTARNTNQATDSGSGGNRLASSL QAYATQLLGQDSGMDPAQKATLRKAATSGKISLSDYKAAWSRYITCVQDKGYPRPTLKTY SNGIQQPQGDILPSDKADDLDYIQKKAKDLNACGIATVDSVDALYMAQVGNPNLYASHEE GAVDCLKRAGLVPKSYTVEQYEKEANAMGHAAPGETVNTTYDMKKPEVLACLAANGNVFM DR >gi|197324945|gb|DS990229.1| GENE 207 221486 - 221731 193 81 aa, chain + ## HITS:1 COG:SA0087 KEGG:ns NR:ns ## COG: SA0087 COG3070 # Protein_GI_number: 15925795 # Func_class: K Transcription # Function: Regulator of competence-specific genes # Organism: Staphylococcus aureus N315 # 1 72 25 96 98 64 45.0 4e-11 MMGEFIIYYRGKIVGGIYDDRLLVKPTKSAISYMPTVTYEIPYENAKEMLLVEEVDNKDF LTGLFDVMYDELPTPKPKKKK >gi|197324945|gb|DS990229.1| GENE 208 221691 - 221801 90 36 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MMNYQRQNLKRKNKQLLVYNFISIYTKQLVLGLTAF >gi|197324945|gb|DS990229.1| GENE 209 221978 - 222133 71 51 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKDISVKWLRTSFGVRIAVYLQGNAVMQCNVERRIVMRRDYAVFPLWCECR >gi|197324945|gb|DS990229.1| GENE 210 222099 - 223553 1426 484 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0289 NR:ns ## KEGG: BBIF_0289 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 484 1 478 478 841 97.0 0 MRCSRCGANVVEGDRFCENCGAPVAVQAGSVCPVCGQQSEPGMRFCQQCGAELSAGPQPA QPAQSDDDGPTMLSQSPLLKPPFQAPQAGVPGTGQDDQFQQTMQSDWTVPSTQPQSAQPV PTAQPVPPAQPYQAVRQYAGQYGAAQPGAVFPPQAVQPPAQPSRPGESAGKGKKKTALIV GIIIAVLVVALAAGFGVWWFMLRDSGTQSAQTQSTSQQSGKTKSGDSKAAKDDKPCTAAP DAELSSVDHSDTNLVAQLQLTSNCASTKDGDTAEFKESDVKVSIKDDDGNVIASAVFDFS NQPVKFNGETANVALEFTTRQYWRPYDQIETGSAEVILQTGQSGTGEAGSADGDALAGSD IDSEDAERYAQLALSWQLKHDESAASRFYTTYTTQLSSKKNDMKADGKTWHYVDIYEQFL QQRIKHKNAILIWSGDYPTYTKADASTAYYVILSGDTVDSVKAGDAWCKSNGYGAADCAV VDLQ >gi|197324945|gb|DS990229.1| GENE 211 223704 - 224000 498 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282367|ref|ZP_03645689.1| 30S ribosomal protein S6 [Bifidobacterium bifidum NCIMB 41171] # 1 98 1 98 98 196 100 3e-48 MSAHKYELMFIADPELDERGLKKLTEQYLELVTKEGGSVENTDIWGRRKLAYEIDGKTEG NYVVVNYTTTPEVSAELDRVLNLNESVVRTKILRKDAK >gi|197324945|gb|DS990229.1| GENE 212 224058 - 224741 876 227 aa, chain + ## HITS:1 COG:MT0060 KEGG:ns NR:ns ## COG: MT0060 COG0629 # Protein_GI_number: 15839431 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 119 1 119 164 142 62.0 7e-34 MAGETIITVVGNLTADPELRTTGNGASVASFTIASTARTYNRNTGQFEDGNALFMRCSAW RDLAEHCASTLSKGMRVIAQGRLQQRSYQAQDGSNRTVIEMTIDEIGPSLRYATAQVTRT SSGNGQGGFAGRGNGGNGGFNASQGNGGGFGGNAGGYQGGRGNGGFSGGYQGGGNGGYQG GASAAGNAGQSAAPATDPWGTSGDAGSSFGSFGGSSDFGGDSQEPEF >gi|197324945|gb|DS990229.1| GENE 213 224827 - 225075 411 82 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282369|ref|ZP_03645691.1| 30S ribosomal protein S18 [Bifidobacterium bifidum NCIMB 41171] # 1 82 1 82 82 162 100 3e-38 MSRKRPQPPVKPFKKKPNPLKAAKVTEIDYKDVALLRKFISDRGKIRSRRITGVTVQEQR ELSKAIKNAREMALLPYATTGR >gi|197324945|gb|DS990229.1| GENE 214 225093 - 225539 715 148 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282370|ref|ZP_03645692.1| Ribosomal protein L9 [Bifidobacterium bifidum NCIMB 41171] # 1 148 1 148 148 280 100 2e-73 MAESKVILTQTVANLGHSGDVVAVRSGYARNYLIPQGLAFAWTKGAEAQIAQMKRARLAK AVATREDAVAAKAAIEGTTVEIAAKVSESGKLFGSVTAEQIALALSDKAAVNPKAIEVEP IKTTGDFPAKAALHPEITASFFVKVVAE >gi|197324945|gb|DS990229.1| GENE 215 226119 - 226868 852 249 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0275 NR:ns ## KEGG: BBPR_0275 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 249 1 249 249 402 97.0 1e-111 MRTRPITKNTCAAASPWTLGNADNTKNNDAGGATRRPKSELNQTDAVVSGEYAAKLGEQL TPYKGDTINQRTLSATPGKTYRLGLWVTLGKSNDDTPSTLKVQVKSNLASLGAVSSFSQY RKTVLSETVDAESKEGGKIHYSGSFVVPLDVDPYAALWVAISQTDLASGSFAYIDNVTLV EDSAAVSDVASIAVTTQPTKTEYAIGDALDLSGMAVTATMSDGTPPSSARANTRSPSSTR RPPAKRPSR >gi|197324945|gb|DS990229.1| GENE 216 226865 - 227389 580 174 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0295 NR:ns ## KEGG: BBIF_0295 # Name: not_defined # Def: hypothetical protein containing bacterial Ig-like domain (group 3) # Organism: B.bifidum # Pathway: not_defined # 1 174 1 174 174 231 97.0 8e-60 MTYAADTSLTATLKVTVKEAEPVDTVPPVISGADDVAVEFGASFDPMAGVKAVDDVDGDV TGAVKVSGDTVDTSKPGAYTLVYTVSDAAGSEASVTRVATVKEKSGETPVEPGDKEPDKE PGKDTDKDGDKDDQGNKKPGLSATDASVSVVAIAAIGLLATGAVSVAVRRRRDI >gi|197324945|gb|DS990229.1| GENE 217 227586 - 227831 215 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFSSRGCARVKSPLIRHWKHAPARVILAIRPYLRFKGLIQAATNIYLRFRGLVAKYKHHA NRMVSMSKCPIYSVHSVLATP >gi|197324945|gb|DS990229.1| GENE 218 228272 - 229003 1043 243 aa, chain + ## HITS:1 COG:CAC0770 KEGG:ns NR:ns ## COG: CAC0770 COG0580 # Protein_GI_number: 15894057 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Clostridium acetobutylicum # 1 238 1 238 242 258 55.0 8e-69 MEYSLFTKLAAEFFGTAILMIFGNGSVANVELKNTKGHHAGWLNIAMGYGFGVMFPVLMF GGVSGAHINPAMTLAQAINGLFPWSDVLPYIVAQLLGALLGQFIVYLTYYPHYKETEDAE AILGTFCTTDADNDKINYFLNEMFGTLVLVFGALCCLMLPWGSKDLAAASIVVGFIVWGL VTSMGGPTGPGLNPARDLMPRLLHAILPIPNKGTSRWGEAWIPVVAPIVGAIVGAWLYVF FFA >gi|197324945|gb|DS990229.1| GENE 219 229312 - 230022 586 236 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0278 NR:ns ## KEGG: BBPR_0278 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 236 42 277 277 457 99.0 1e-127 MGGERSSIAQPGATAQPQSAGEQKGGDSAKSSATAKSTNSEAQSNGHDPSKPFSQAQRRE ILEKAQQTAAASGKPRHEYHYCVSTKGSVGDTGEFGRTVYATLNDSRGWPRAGLTFVESG SSKCDMTYILAAAEYMKSFSSLCSSQYSCRVGNQVIINYDRWREPTDSWLKGGGNLANYR TMVINHETGHRLDHRDNETVCQQAGEPAPLMQQQSISLRGCTINEWPLDSELWARW >gi|197324945|gb|DS990229.1| GENE 220 230079 - 231200 718 373 aa, chain + ## HITS:1 COG:NMB0349 KEGG:ns NR:ns ## COG: NMB0349 COG0008 # Protein_GI_number: 15676264 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glutamyl- and glutaminyl-tRNA synthetases # Organism: Neisseria meningitidis MC58 # 38 347 20 275 295 134 34.0 3e-31 MLGAWLSARAGGPERTSRTGGGAGDADCPNNVNRVDGMSGAADPGDADGGRGRMLLRIED IDTPRVLPDADRWIMDDLAWLGLDWDGEPVYQSRRLDIYEQALRALQGIDLRDAAAFGGR DGVDGTETTALIYPCFCSRADIRAASAPQEGDRFVMYPGTCRRALAEHPRQVEQRLANGD RHSLRIAMPVAGDARAVVTVHDRVFGNCRFDLPRDLGDTVVRRADGLFAYQLVVTVDDLL MGVDDIVRGRDLLRSAALQLYIRERLLDAGFGDSSDGGVAAAHRDIRFAHLPLIDNAAGR RLSKRERSLDMGTLRKHGVTAHQVIGYCAWLLGLQQEPEPCAAADLLHGFSWDALAADSQ DRSIPDDPFSIGL >gi|197324945|gb|DS990229.1| GENE 221 231378 - 232202 899 274 aa, chain + ## HITS:1 COG:aq_274 KEGG:ns NR:ns ## COG: aq_274 COG0325 # Protein_GI_number: 15605814 # Func_class: R General function prediction only # Function: Predicted enzyme with a TIM-barrel fold # Organism: Aquifex aeolicus # 29 273 9 228 228 139 35.0 4e-33 MTAYMDHKDLTSESIDETRATQIRDGVHRVLDAIAEAESAAGCAPGSVKLLAATKTRDVG EIMAAIDAGIRMIGENRPQEVMAKAEGLRRLCADRGFALGTGDGDTTRPSDAEHIPFHLI GQLQANKIGKILPDVNTIESVDGVELAQRIARRAVARGITVGVLLEVNESGEASKSGCDP QAAVDIAAQIAQLDGIRLEGLMTIGAHVDDEATIRACFAHLRGTRDTILASRAPGTEHCT ELSMGMTHDMALAIAEGATIVRVGTAIFGERAFI >gi|197324945|gb|DS990229.1| GENE 222 232343 - 232723 439 126 aa, chain + ## HITS:1 COG:PM0396 KEGG:ns NR:ns ## COG: PM0396 COG1254 # Protein_GI_number: 15602261 # Func_class: C Energy production and conversion # Function: Acylphosphatases # Organism: Pasteurella multocida # 35 100 15 80 98 70 57.0 7e-13 MKRDDMRASRGARTDESEEGAVPVSSSDDIRVHAVVAGLVQGIGFRYFTVMTAGKLGLGG WVRNCYDGSVEVEAQGERGKVARLISALKQGPRYADVERVDVTEIPLQELKPARHGFPSF GVFYER >gi|197324945|gb|DS990229.1| GENE 223 232686 - 232883 105 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSPRSACSTSDSFGSIETELFHRQMMVNDVSRWFSPLSEAIYNSAPAGWLLRSGQERFA FLSAR >gi|197324945|gb|DS990229.1| GENE 224 233398 - 236907 3652 1169 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0282 NR:ns ## KEGG: BBPR_0282 # Name: not_defined # Def: cell surface protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 1169 5 1176 1176 2013 98.0 0 MLIVTKQDRKPSHTRAMRSRLIAAAVSVATVLGLAVTGTAIAANVGTVAPEAAQSATTQA SQAGTGPISGVAQGDSAQQGVPSALTDRAGTGASGQTATVKASAAPRATANDGKVKINLF DYWDSSDPKGPAKAAGKENVNYATGGTSRNEAAAAFYFNGKGKDWNGWTGSAETSPGIVK TNLTKTGADAVPQFSTMVTNKNNAQTDMTYLFTESEWAKAYTNGGNGLTGLFDPTEEAKG HYVYDSNTTYAALNSAGTGFDRSATWTERTDAWIPKFLPFNADKSQLRIGFHSVRGARYA FGMTAYAKFMQPKEGKLVDGSPMTFNFTGDDDLWLFVDGMLVLDIGGIHDAASGSIDFAT GVVTIVSNKTTTTTLQALFTQALRDQGKSDAEITAWMESNMVKASNGSYTTFKNYTSHEM NMYYFERGHSGSNCKLDFNLVTLDSSHIQIGKETENVPEADKDKNYTFNAYVNYEGTDSD KDYTLYTGKYDVYNTATGTKDGETRTTDSNGVITLKAGQYAVLLGSDAKRITESSKYKVT EINVDQDTYAVSANGGQVKVTQEKDSATTEPVSVGEVPRITVTNTVVTAPRYRKYIKANN DGTYDLSLNVTGTQSGSSQTTVSPADIVVVFDTSGSMSNPMGHNSRLEVAKTAVNSMAQH LLTSENQGKDSNIRMALVPFSTTVGNVSNFTDNAMDIVSAVNGLRADGGTNWEAALKAAN AKLTSGRKGVKKYIVFMSDGDPTFRTSSVRTGTDWWGRPTYDDDDRRGLPAGVHGSGSSD QYGANLSSAVAEANRRGDATLFSVGVSSDPTKMRGFADQTKGSYYSATSTDELNKAFADI IGQINRKSSYKNVSITDTLSDYAEFVNADFGSNDVTVTASKDGNSVDLNESDYTVTVSGK TVKVTFADGYELQDGVTYTVTFKVKPTQKAYNEYAANKQNDDKTGYKDVLGADNTDADGH HTSSNLPGFHSNADHGAKLEYTVVNTVGDQTTETPGSVEYPHPVLQVKTGKIQVTKNWSD GAEKHGNGSVTVTLKQCNAQGEDCKDINRTVTLNNQGQWAGAFENLAPGTYRVEESSVDG YTASYNPENQLVTVTADDLWAAPDNNNMTTFDNVKTYPVTITNTFVAVSALPMTGGATTR DWLVYGGGFGLLAALVRIGYFIWRKRRLV >gi|197324945|gb|DS990229.1| GENE 225 237069 - 238670 2103 533 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0302 NR:ns ## KEGG: BBIF_0302 # Name: not_defined # Def: hypothetical protein with Cna B-type domain # Organism: B.bifidum # Pathway: not_defined # 1 533 1 533 533 808 98.0 0 MKFKKLFAGVAAAATLLAGMAFGTGAANAAETTVDTAATVTFKASKEKQLTSAQLSAYKI ADYVNYGTAKTPVYGVKTAAGADRAKLAAALTTAGFQNVPTDGTTDLMAWAMNQKKTTDT DGTVTQVQFDQSETRPWNNPSVTRKFADALQANNPFTATADPFALNTATGSDTDGWTATN KTALTAGVYLFLDGNASTDTLTQAVPMIVSTGSVNAGVLSLGDSTAEVDMKSTVSGTQTK STTSKSASVGETVPFELGYTIPNPVPTGFTLQFRDVPSKGLTVDFAGLTVKAGDKVLTGT DYTVENHLIDNKGNGTNTFVVKITDPAKYAGKQITITYNATVNDEAETVKGQDYHAVTNK LVDNDGTPIPGTETLTKIFGFKFTKVNAQGEAVEGAKFTLSVAKDQNGVLPNSDKYPLEV TSGANGVVKFDGLKAGSYTVTETAVADGYQDFKASFTVAIDENGNVTFAGTDSWGLAPKD SAADYKVTNVKSVFELPKTGAAGIALFVVIAALLGGAAATVYAKSRRASRALR >gi|197324945|gb|DS990229.1| GENE 226 238851 - 240029 1183 392 aa, chain + ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 132 331 15 198 251 179 47.0 6e-45 MASRRHGSKRPATSSGNDPAAKSSHAPARSTMTRSLPDNDERSSNNSRKSYRNSRHKPAV QPQLPYSMLSFNQATDIFDLVAQRKRLRIQLIIMRIVTLILVIAAVAVAGYPLALQYQSS LKLAQTSRNSAQQVAGWPYPQAEDALAAARAYNAKLARSGQPVLGEAIDPFSAAQGGSRA KGEDSAASKDKEYQSLLDSGDEVMGTIKIPKISVNLPIYHGTSQTALASGAGHLYGSSLP VGGDGTHSVITGHRGLVNAMMFTRLDEMKTGDFFYIEVMGETLGYEVDRITVINPDDTSQ LKIVPGEDRVTLMTCTPYGVNTQRLLISGHREPIPMPAPDPSDLHDTRTIVTMVVVCGLL GGWLLLGVIGRIRRLPFKPMRHASSWPWRMRG >gi|197324945|gb|DS990229.1| GENE 227 240305 - 241681 1442 458 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0285 NR:ns ## KEGG: BBPR_0285 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 458 1 422 422 441 89.0 1e-122 MSNTYPDGAPQTPYGDPNNAAGAEGAPEPQPTQAFPPVPVVPLPGQGAGAPTGAPAAPYG QGGAPYGAPTAAYGESLAGLQGGAEPYGYQAAPYGQEPGAYGQSGAGSAYNQGGAPYGQQ PEPGPNPFIQPDGGTPYGGEAPTAAYGEPLAGPQGGNGNAPAAPYGQQPEPEYGAGAPTA AYGEPLAGGAPGGYGQPAAPYGGEQPTAAYGQPYGANQYGDPQYGNQPPAIAPQGYGNPY QQEPPKKKSRGPLIAGITAGVVAVIAVIVVVVLFATGVIGGKKDSSADAKPNTSTSQTQG DSKSNGDSSSNGNSDGSSSNDLNNLDDALQNGADDTNNDLNNDSFNGSSSSGKPSLEEFV NSSEIQSQLDSMTSSYQGMGISIKAYAEGNTLVYDYTLSDTYSSMGDMMTSSLDGMDSTF KSVAQTLNETCDTGGNAKVRVYLHTESGKTLFDKSYTE >gi|197324945|gb|DS990229.1| GENE 228 241796 - 242611 1084 271 aa, chain + ## HITS:1 COG:ML1689 KEGG:ns NR:ns ## COG: ML1689 COG0179 # Protein_GI_number: 15827898 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) # Organism: Mycobacterium leprae # 30 270 5 238 242 172 45.0 5e-43 MRIARFSLNDKPRYAFVQQDPADGKDYLIELDGYPFGAAPVKPTGERYALDADGLRLLAP VIPSKVYGLAKNYEAHAQFMHESGRSEIAHAPEDMVIFSKPSTSVIGPDDPIVIPSYSND MNFEPEVAVIMGRIAKNVPVEKAMDYVLGFTCVNDVTLRDLQGLDPMWTRAKGFDTSCPI GPWIQTELDWKDAKISFTLNGEDVPMASGTTANLIHSIPEQIAAISSFSTLLPGDVIMTG TPNASGHLDPGDEPIVHVAGIGSLRNVVVRG >gi|197324945|gb|DS990229.1| GENE 229 243030 - 243440 191 136 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVAPEASVLGHTRGMMSFARVRRVVLNVTVAAGRFFVDLKHDRSQNSQIRELFWRKMAVS GFVSASFESVSHGFELSILRFGASKSVQNLSRVRSTFGNRMGAESVVRIRHRRKALCGAV RMSWAAAAKAHETYGG >gi|197324945|gb|DS990229.1| GENE 230 243442 - 246105 1852 887 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens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gi|197324945|gb|DS990229.1| GENE 231 246400 - 247173 890 257 aa, chain - ## HITS:1 COG:alr1196 KEGG:ns NR:ns ## COG: alr1196 COG0668 # Protein_GI_number: 17228691 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Small-conductance mechanosensitive channel # Organism: Nostoc sp. PCC 7120 # 14 219 99 307 357 104 32.0 2e-22 MDQILQWFEANAGKIIFLLVAIVAALLITKGLARVMRKVLDRTDMPSASIFINIMRVLVW ILAASIVLQPVFGISPTTLMTALGVGGIAVSLGLKDTVANVISGFGLMLGKVIQPGDLVS VAGTAGVVKDITWRQTVVRERNGNEMVIPNSVLNTASLEKLTPSNEGCVTMTFTAKAGSD PAHVTEAVKRAVATATAEFAQPGSEPLVKLTGFSPYGIEVQALAFTRDGVFLSTMRDAMA RAIAGCEFVEQRAAVGE >gi|197324945|gb|DS990229.1| GENE 232 247236 - 247886 768 216 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0309 NR:ns ## KEGG: BBIF_0309 # Name: not_defined # Def: hypothetical protein, transcriptional regulator, TetR family # Organism: B.bifidum # Pathway: not_defined # 1 216 1 216 216 417 98.0 1e-115 MPRPRKDSEILSATERLENAFWELLADHEYRKITVTEVVREAHVNRNSFYYHYASLPELA DSAIMHAVEHSTVQAPRADLNPDIEWRRQCSLVMNDPVQRQRLNRLALLAGSHSSPELIE SLKDFGRLMIINDLQLDAGNLDLKTDLMLDFTVGGILAVLRRWPELSKRLSVDDLLNEDV AVLAMGVYLSMSKENMLAYWSRIFKGDIPGDFKTAH >gi|197324945|gb|DS990229.1| GENE 233 247888 - 248109 137 73 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVPFLRDVRLSFIGHYVYMCDMDYCRADCEADDRKIGELSIFLGWRNRVRARDGYREERD RTAAMSSPIASIR >gi|197324945|gb|DS990229.1| GENE 234 248049 - 249323 1227 424 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0290 NR:ns ## KEGG: BBPR_0290 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 424 1 424 424 814 99.0 0 MTGNRSPARPLAAPDDKHSPAAAERRCTTPNIIDYARSETRPFGVDAPFNAVDALVLASL VYQDMPACVRTLADVEARSGTFRRRLSSIDVRHPVRSIRHLAAPEFGDATLASVSEALTP DDFHVESGHNGLADPRLTQELYAAIGVNPRFACVRVDASDEHFSEEQQMQFAAVTMLLPG GTLAVAFRGTDDSLVGWKEDFNMAFRYPVPAQHAACEYVCAVARLWRGPMVLLGHSKGGN LAVYAAMNAPEPVQRRVTAVYSLDGPGFPSQIVGSDPYRSVMPLIVKIVPDSSIVGMILE TPEPMRVVRSDQKGVMQHLTFSWQVSGNDFEYLPQVSPSSQLFNRSLNGWLESLSTEDRE RAVDALFSVLRSSHADSISDLMAAGLKAVPTMINTFVGLSEADRRHLIEAMGLLMAAVRS RSSR >gi|197324945|gb|DS990229.1| GENE 235 249431 - 250621 1673 396 aa, chain + ## HITS:1 COG:CAC2832 KEGG:ns NR:ns ## COG: CAC2832 COG0436 # Protein_GI_number: 15896087 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Clostridium acetobutylicum # 1 392 1 391 393 384 46.0 1e-106 MINETYKAMLGGKSVIRTLSEYATARGTEIGYDNVFDYSLGNPSVPCPSSFTKAMIDMYE TADPVALHGYSPSLGNPEACRTIAESLNRRFGMDYTAGHIFPTTGAAGALAHALRAVTKP GDEVLTFAPYFPEYHPYVEGAGARLTVVPADIESFQINFAAFEAALNPEVAVVLINTPNN PSGAVYSAETLDRLAGILRAKQAEYGHDIFLISDEPYREIVFDGGTQPYPAKFYDNTLTC YSWSKSLSLPGERIGYVAVNPRATDAELIVPMCGQISRGTGHNCPSSSMQLAVAKIIDET SDLSVYETNMNLLYDALTSIGFDVVRPGGTFYIFPKALEADANAFCMKAKEYDLILVPSD SFGVSGYFRMAYCIDTDKVKRSIPVLERFVREEYGL >gi|197324945|gb|DS990229.1| GENE 236 250844 - 251743 471 299 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0292 NR:ns ## KEGG: BBPR_0292 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 294 1 294 321 373 95.0 1e-102 MKPHDMQPHASPGGSRRRRPPVIATRRMVALTGGLCAGAGGMVLIRHLSAGSAGSASTMQ PPSGNFGGSANTMQYDYSGSYSVSLTVGEDSTAVIDGTDITVSSSGSNGVFATDSGTALV NDTSIETMADNSRGLDATYGGTILANKITADTQGGHSAIVATDRGGGSISLADATLSTAG SGSPLLYSTGDIQVNNVSGTSSGSQIAGMEGLNTILIKDSTSESTVTGKTASDPIATASS STSPPRATRKPAPASTPRSSRSIPHSAPPSDQGRCSTSPTRPPMWCCRTTLSLISTPTR >gi|197324945|gb|DS990229.1| GENE 237 251665 - 252078 517 137 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0312 NR:ns ## KEGG: BBIF_0312 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 25 137 243 355 355 127 93.0 2e-28 MFYFTNTTADVVLQNNTELDFDTDAVTLTDNAAAGSGTGTASDAPITVNVDGTSTWVVAK DTTISALNVASDGDGNAVTIVANGKTVVSGSGDVTVMVTGSYSTSVSAGSDTELSSDTID RSEFDSRFGTSTAWTMA >gi|197324945|gb|DS990229.1| GENE 238 252145 - 253083 545 312 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0294 NR:ns ## KEGG: BBPR_0294 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 312 1 312 312 258 96.0 2e-67 MTSNNSNNVNNANGGESGNGADGAIEGVAIEVAANVTGSEQRQAAVNDAAVADGDRAAAD NGGTDEYAGNRAAGLGDAEWAAGTGAAGCGTAGYGSAGYRLAAAPGSSGYAPNGPMPGSY GEGSRAAWYAQNAPTQAMNPQPGNMQAVSGQNMNAQDANMQGANTPDANAQGGRMPLYED WNGRGPVPGSMGGQVPTPKGSKGGEHALSGKTWALLAVVSLVCGLVGGVGGALAVNALTD DEDGTGSSQQMQMPGGMGQPPSGGQFGNGQFQQYGGSGKSDSQLGSGSSGSGSSSSGSGS SYSSDGSDATTM >gi|197324945|gb|DS990229.1| GENE 239 253087 - 253308 85 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140730|ref|ZP_07802923.1| ## NR: gi|313140730|ref|ZP_07802923.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 16 63 36 83 177 65 68.0 1e-09 MSRVQPQSRPTAIAPPPYAPIILVKLRVEIAVLGNSPCEIAVLSSKNGDFTRGIADFGYF NPYFRVLFALHSP >gi|197324945|gb|DS990229.1| GENE 240 253919 - 254194 272 91 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0314 NR:ns ## KEGG: BBIF_0314 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 76 1 76 91 139 94.0 5e-32 MSIHVVPFIVCLVLRSLRFTACRVFSDCISLGVKQVAERLGITSGGLLNLKLPEPDAMIG RTRGWLPETIDGWNAKRPGRGVGGGRPRKNK >gi|197324945|gb|DS990229.1| GENE 241 254386 - 256197 2599 603 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 596 1 596 600 461 40.0 1e-129 MVKEFTNPLKEPIDDDINLFDFLDRRAQRDPDGSTVEYKADGGWKSFSATQFRDLVIALG KGLIGLGVKKGDAVSIVSRTRWEWTALDMAIMAVGALTVPVYETNSDAQVSWIFNDSQAT IAFAEDDGQRDKIESIHDEVQSLRKVFVIEAGALEALQAYGKEVSDEEFWARKNDAHGDD LATIVYTSGSTGTPKGVELSHRNLAFLCLSAMQYMPRACAWPDRRLLLFLPLSHVFARFM ELLSFCGTLTLGLSSDMKTIVKDFESFGPTLLLAVPRVFEKVYNAASQRAGKGIAGKMFL RAANVARDWSKAEQAGEKLPWRGRLAHGFYELVVYKKIRTIFGPNADFAITGGAPMDANL SHFFNGIGMPLLEGYGMTETCGPVCVSLPENNRIGTIGMPMSGVTAGIADDGELCVRGHL VCRGYHNHPDVTAEQIVDGWLHTGDLGDIDEDGFISITGRKKDLIITAGGKNVSPGLLEA AVMTSPVVNQCLVIGDRKPFVAALVTLDLADANAWLKSQGAQEESDLASLARNPIVHTEV ERAVNQANEGVSRAESIRKFEILPDEFTQDNGMLTASLKTRRAQIVAHYRELIDTVIYVP KKK >gi|197324945|gb|DS990229.1| GENE 242 256328 - 256510 93 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLPSGSGRFAPAHAARLYLARASPIPPVTFIGHESPRRATEGAILANLPPSYSPGHARRT >gi|197324945|gb|DS990229.1| GENE 243 256659 - 256895 254 78 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0317 NR:ns ## KEGG: BBIF_0317 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 70 1 68 113 123 91.0 3e-27 MTNGDRNLRLAAFILNIISMVALGWTLLPLAWMSPMTVMSWGIYKGTRANTVAFGVCNLL FMNAIFFGGGLLISNKER >gi|197324945|gb|DS990229.1| GENE 244 257479 - 258231 586 250 aa, chain + ## HITS:1 COG:ECs2126 KEGG:ns NR:ns ## COG: ECs2126 COG4106 # Protein_GI_number: 15831380 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Escherichia coli O157:H7 # 1 164 67 220 252 110 36.0 3e-24 MIASARKLHLDCDFDVLDVGSLDELDTDFDVVFSNACLQWVPNHERVLPSMLRRLNAGGL TSAQFTENINLPPHIIMRETACEPKWRQWISEIRRYCNLGGDNFDVSAYYDLLAPLSAHV DVWETNYYHALPGYEAILDWYRGTGLRQYLAQLPDDGLYLRVLRASVERAIDFSYVRGLV SRPATCFDGGCRRQGARRCHVNGSHVKKGVAMVSTTLDFAEKYLLKTEVRTVAVMPDDDD SVRDDDSYDA >gi|197324945|gb|DS990229.1| GENE 245 258334 - 258579 63 81 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPDWPGTILAPVSLRTIRCISCHREGSSWGAVGDAFPRALNPAQIWGRIGHLVQAAGPLA RPRYGMAAVAAGKIDFVRIVI >gi|197324945|gb|DS990229.1| GENE 246 258749 - 259996 1314 415 aa, chain + ## HITS:1 COG:SA2495 KEGG:ns NR:ns ## COG: SA2495 COG1396 # Protein_GI_number: 15928290 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Staphylococcus aureus N315 # 1 66 1 66 189 65 45.0 2e-10 MSFRTNLQYLRAQRNMTQERLAMLLGVSRQAISKWESEKAYPEMDKLLMICDLFGCTLDD LVLGDVSVSTSRPDSHGASATGCGTTVGGRTGEDAGSPAHAGNAKGSIGDADEPAHLGAA GAIEPSLTGVPTGETPYGTGSPRPAVHANTATLPQDLTGYDEHRRRFALLISGGVAAIIA AVGICNLFDSSNSILGVTRLNDFLTFLCICIGVIAGLAMLVPGGMSHAEFKRRHPYIEDF YTDEDRSRETRLLVVGIVGGIAAILIGIAVTVYADDVLGISDGWPNAIMLMLYSVAVFSF VYCGIRHGMLDIDGYNKKADTDGKKERAAGHDFYDNLTGAVCGIIMSLATITALCLLFLG PWMLHDDWSSVGLFWLPWPIGGVLCGIASLIIQLVKDYRRRNDDGQGAGQPGRTK >gi|197324945|gb|DS990229.1| GENE 247 260294 - 260575 122 93 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0321 NR:ns ## KEGG: BBIF_0321 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 93 92 184 184 167 97.0 1e-40 MPLHRRLMAWAVMRKTQDLSSGERRLMQGLCDVLKQLLSKPYQRHMADLLIDAASHADMV TAVISRCWCAWTSTWIPYAPSSGRMRPALSRRL >gi|197324945|gb|DS990229.1| GENE 248 260572 - 260676 90 34 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRRRPRASLGVLSIAVLLVVALVFLLLQKDPTRD >gi|197324945|gb|DS990229.1| GENE 249 260842 - 261165 283 107 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0313 NR:ns ## KEGG: BBPR_0313 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 107 1 107 107 203 100.0 2e-51 MSTTTVRMDDDLKAEVNAILDSMGLNFNTFVNMASVQLVSQRRIPFEVRAPEPVLPHAGH VAANGVTYRGVDEQGYPVVEVPNAMVLNPSRGSDGVAVLPKAWRDGE >gi|197324945|gb|DS990229.1| GENE 250 261166 - 261384 142 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLILGQLHIARPMPSWIAGQFHSHSTVVVGLYDDGGHVWLRDFVGSSSNRTRMRYTSKTC SCSGTGINSGIS >gi|197324945|gb|DS990229.1| GENE 251 261274 - 261543 115 89 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0323 NR:ns ## KEGG: BBIF_0323 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 89 42 130 130 175 95.0 5e-43 MAAIVIQADDDGGVAVKLTSNPTWHGAGDVQLPEYEHAGLTHLTTARCAQLVRFRRSDLQ GFAGRLSRNDAMRVANAVGEVKPEEQVWL >gi|197324945|gb|DS990229.1| GENE 252 261722 - 262465 607 247 aa, chain + ## HITS:1 COG:SPy1863 KEGG:ns NR:ns ## COG: SPy1863 COG0789 # Protein_GI_number: 15675682 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Streptococcus pyogenes M1 GAS # 11 246 5 237 245 165 37.0 6e-41 MSMDDETDSRYTTGDIAKLTGVSVRTVQYYDAKGLLIPNEISDGGRRLYGTAEVERMRVI LFLKGLGFKLEQIRSILSDERPERVLVDLLDQQTASLQSGIAEQKQRLDDCLQLRKALTV SASDFVSSTLTDMATVMNTTTTHSLRTTYLVMLAITLPATLLQIACLVIGVMTDVWWPLP VAVLLAIALTVAAMKYYRSRVQYLCPACHETFQPGMREFVFAAHTPKTRKLTCPHCGHRG YCMELSI >gi|197324945|gb|DS990229.1| GENE 253 262646 - 263968 1838 440 aa, chain - ## HITS:1 COG:CAC1585 KEGG:ns NR:ns ## COG: CAC1585 COG2270 # Protein_GI_number: 15894863 # Func_class: R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Clostridium acetobutylicum # 31 431 4 407 425 323 45.0 3e-88 MNDSIAAKPADGPADSAAAGTDPALTATAKLTPREKKWIIYDVGNSAFVLLSTAVIPIYA KSLMPADGNIVSAWGYAQTIASLVIALLMPLLGSIADVQGMKIKFFLGFFGTGVVTCCAM ALPLTWLPFLVVYILATIGLNGSLTFYDSMLIDTTPNERMDKVSSHGYGWGYIGSTVPFI VCIALIFGGPALPFGWTTTGCTRASFIITAVWWVAFTIPLISSYRQEHYRATRDQLGTAV RGTFRELGGTFRKIVRNKPLWMFMLAFFFYIDAVNTVISMSTSYGAELGIDSTQLVVALL VTQFVAFPCAILYGRMAGRFGCKAMIVAAVVAYMCIVFFAAFFLVSAAQFWILAILVGMF QGGIQALSRSYYGKIIPKDHANEYYGFYDIFGKTASILGTFLVATTTSITGNASLGVLSI AILLVLALIFLLLQKDPTQA >gi|197324945|gb|DS990229.1| GENE 254 264931 - 265989 1266 352 aa, chain - ## HITS:1 COG:STM2144 KEGG:ns NR:ns ## COG: STM2144 COG0524 # Protein_GI_number: 16765473 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Salmonella typhimurium LT2 # 23 318 22 297 321 100 29.0 4e-21 MLNSLKGLLSRKNDVPSPTVISLGQVWVDIMMDIDAIPQPGGFAVANHTMPSVGGSFRVM QAASRIGAATKHAGVIGNGPWASLIRKALNDNGIEHIGQDRIDADSGFRLVLNDSERKTF VATYGAESQGNENTFDCVEPGEGDVVHISANTLMDHSASGIDAFLHRTSSDPTTRDYSIV LNPTNTLHMVSDHLLEDLVLVRPIWSCNRQEARTLADRLGVFVDDSLSMTVGGGFDDSMK ALCNSLGATLRAPLVVRAGSRGAWVRTPGGEVIHVEGYPTKATHTRSAGSCHTGAMCALI ARGWSLVDAVKIANAAASLGIQRSINGVPDCPGYDEVIAKLEEDETPAEAAK >gi|197324945|gb|DS990229.1| GENE 255 266046 - 266225 150 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFKSSVFQHGCLNTQLHNNSAKHKQMQIKRVSLRLSPTHPHNITRLDYCRIQQLFIKSR >gi|197324945|gb|DS990229.1| GENE 256 266249 - 266443 338 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282407|ref|ZP_03645729.1| 50S ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] # 1 64 1 64 64 134 100 9e-30 MAARCAVCGKGPQVGYTVSHSHIRNKRTFRPNLQPVRTTVDGQNVRVRVCVKCLKAGKVQ RVVA >gi|197324945|gb|DS990229.1| GENE 257 266563 - 269247 2579 894 aa, chain + ## HITS:1 COG:ML1671 KEGG:ns NR:ns ## COG: ML1671 COG1200 # Protein_GI_number: 15827885 # Func_class: L Replication, recombination and repair; K Transcription # Function: RecG-like helicase # Organism: Mycobacterium leprae # 3 862 2 709 743 312 31.0 2e-84 MSITLNTTMSSIMTNKRRVGALKSLGVVTVGDALTYYPFRVADPVPLRALREARIGERMA FSASVRGMRVVPMNVRRGYRLEAVVDDGDFAVSRHIAGAAARLVFFSYKKQYVDWLSMRL RSGAIVVIAGEPSEFNGQLQFTHPEIMTVAPGSGPADGEYSGVVQMSALKYDADTVEAGL RRISRPRPVYHASSRISSEHIHESIVQCIELLAGTGQDLPGDAATEAPQTMKPMEDGGIS GAGTAPADAESRSGNAVAVGLARAIPDVLPESVRESNHLLHRAEAFLAIHDPLNTADFKR AIGTMRYEEAFVSQTALLQSRSNVRKDAALPCAGVALRDRFIESLPFPLTGGQREIIDDI GVDMAREYPMQRLLQGEVGSGKTVVAVAAMLQAAGSGHQAVLVAPTQVLAEQHHATISAM LCAIDSVETGDDPSRDALSPNDPADLIKAAESAADDGDAKGRAAVKHPVKHSGARSGKQD GAAHAQSDANTRHVPVILLTGGMKLAARRRALALAASGDPCIIVATHAAFSKTFQAPNLA LVVIDEQHRFGVEQRESLRTKNDVVPHLLVMTATPIPRTAAMTWFGDLDISWLTELPGGR KPIRTFIVPEDDGRMMGSMFAHIRGRIDAGERAYVVCPRIDADDESDGDDDTSGASQIGV YDDSDTYRRESANTTTSAPSQEDGDGAPSRPPLHSVAEIERRLSSLPQFRGIRFATLTGR DDDATKQQVMADFADGATPVLVATTVIEVGVDVPQASCIVIFDADRYGLSQLHQLRGRVG RGGTDSWAFLISRAEDGGPAQQRLQVIQGTLDGAQIAQADLEFRGAGDVLGDAQSGGKSG LKLLRVVKDAKIIADARERAGRLLADDPDLSGEVELAGAVLDFTRGNETFLTSS >gi|197324945|gb|DS990229.1| GENE 258 269428 - 270735 1388 435 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0330 NR:ns ## KEGG: BBIF_0330 # Name: not_defined # Def: amino acid transporter # Organism: B.bifidum # Pathway: not_defined # 1 435 1 435 435 613 99.0 1e-174 MASSRSLHTVHLAAFGAGNVVGLGVMSMAGIGVGITGTGLWLAALVGGLGGAFALVPQLL ASSSGDYPGGQYQQVGTLLPPVFGGIVAYILCFLVFDISAYALSAAQLLGLPMLPTRLTA ALVVALFLGVHMLGARIAAIAQLVMAVLLAAALGTYVAVTMPHVRLANLAHYTFLGSPLA FLFACVYMTFMMNGVAGVANYAAVADRPRVTVPRAMRVSLLLVVVTYALICVADAGALPI AQVANRDLAVSLSAFVPAPVTVAFVVGGSAFALLTTLNAAVGCMAYPVASACADGWLPRE LGERSARTGAPVRLLSVGMIAAECPLIAGNSAKTVSSSVTILMIVVQAMVAVAALRLILR DGSSLCAFRSLPLLGRVPQSGLAALCIVALLVDLLLIAWLLYTMNRLLIIGNVVIFAITV VAAVIVNKYRVDTRP >gi|197324945|gb|DS990229.1| GENE 259 270788 - 270958 124 56 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0331 NR:ns ## KEGG: BBIF_0331 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 56 2 57 57 96 98.0 4e-19 MSTFTGTREQARPRMMGRHPGQVSYPSKEYVMCVNEGVKASAVGSLSGGLPIMRER >gi|197324945|gb|DS990229.1| GENE 260 271196 - 272284 1053 362 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0332 NR:ns ## KEGG: BBIF_0332 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 362 1 362 362 401 98.0 1e-110 MSTSSARHETPRNGRPVERRLIRVLAGSAVIGAMAVGGLQFALGTAYAAGDVCDLCSTNY NPVACCSSGGSAYDSNPGGGIDVSAQKAAFDSYCANYKKEHAQKEEPATPAPATKPSNPK QSAPAPAKQSSGSPATQTTKPSTGNTTAQQSQPAQSTGTQSGQSTTGSTAGITGDTAANA DATATQTSKDAASRKNSDDNTADTAGGETTTTESGITDSGTDTAETTTQASPVTDRAETT SPVVRIVAGVVIALAVIGTLGAALIVRNKRRAPALAGANGGRSDDGFDIADGATPAPATT ANAIAATEARADASAPTEVLQPIASPANGPSAGPSASLNVADSGGAPTARYDFNLVDGPS SR >gi|197324945|gb|DS990229.1| GENE 261 272348 - 274258 2808 636 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0323 NR:ns ## KEGG: BBPR_0323 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 636 1 636 636 1000 99.0 0 MSNTNHSLTRGSIAAKAAALLTAAALGLTGFALTGGNAASAAETTPTAATAAQSQEDTPF DYYAGIPNLPSDHVFENITLERLEDILRYGKGNFVILIGGTWDSATTAALPAINTAAKAQ GIEKIYNFDPHLDNAGADTLVNINDKNNAVDAFAKRFQQTIDEFGLTDLQSKDTANVVDL PTLFTYNKDNTGDKVLASTANVADSAELTRVLGTAKNAATRTNGQFYTNYYLNNVSAGAA SVFKQGEDKDFSLISVTYGELEKLLQSPGNHYIFFGATWCGNTYATIRYVNQEARKYGIK HVYTFDTILDSTSGKGSPFHIRDNYNNGSHPLSDLYTHLVNTYLPNLVTEDGSHGVVDSK GVGATRLQVPLLLHYNKNNAAQLPGTDQPAGPVTDEVVDYHGKTANVDAKPQPTAREYML NWYGTTYDDKAIIQGGFSITGDDLSAAKNYGRKVNNDRDAYIAQADHFYSLLNLRGEIAQ AKTVSLNGYSADRVAAFKKTLAAAEKTVSDKKATISATDTATKNIANAVTALAGGNNGGS GNGNGSGSGDTGNNPVAGNTDNAGGNDSTAGNKPSRKIVVAGNEPLSRTGAEATVIASVA LSLALTAAGALALSRNRGDAAAAQALSDSTRPTSAR >gi|197324945|gb|DS990229.1| GENE 262 274267 - 275826 1627 519 aa, chain + ## HITS:1 COG:VCA0088 KEGG:ns NR:ns ## COG: VCA0088 COG1301 # Protein_GI_number: 15600859 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Vibrio cholerae # 39 417 53 424 424 148 29.0 3e-35 MGALSNIDPTAVAVWASAVVLFALSLVFDGQVDSLNLLGNIYISLITALVAPLIFVSIIS SITYVGSLKKLRSIGLRSVGWLLLTNLIAIVMTLGVAIPLHIGSGVKLVDDESTAGFLTS QTAPLDQVILNFFPKNIVGDLSGNRVVPIIITATVLAIAIVSVGRQKDVSVVKRFFEQTK GVIYKAVGYVVELTPYAVVVLGATSTAATTSKADALLALLSILVLGFVLNIIQAFVVNGL LLKFVAHVPPLTFFKAVLPAQTTAFATQSSVATLPLSIRQLGTVGVGADVANFTTPIGTT IGMPGCAGVWPMLSAVFTINALGLGYSPASYVALAVIGLLSSIGTAGVPGTAIVTATTVF TAVGLPVQLLVPLVPVSNIVGMPSTMANVSAAVTCAAIVSRQTGEFDESVLDSARAGRHR HRAGVVVSPAGGAVAAPVVPVAAPLGAVGVAASVVASPVAAGVGAAHKPVQPGFAVTPGL SLTLHQSMLRVQADDDTDDAPVPVGACGISAHAATAKAA >gi|197324945|gb|DS990229.1| GENE 263 276071 - 276733 566 220 aa, chain + ## HITS:1 COG:mlr8254 KEGG:ns NR:ns ## COG: mlr8254 COG0742 # Protein_GI_number: 13476820 # Func_class: L Replication, recombination and repair # Function: N6-adenine-specific methylase # Organism: Mesorhizobium loti # 1 205 1 184 184 99 37.0 7e-21 MHVISGRFKGVALTTPKTGTRPTTDRTKEAIFSHLDSWQVLDDARVLDLFAGTGALGIEA LSRGARELVAVESSAPAAALIAKTLTALQRNRSWERGMTARVIRARAEKYVASGAARSAS NADAAGGSAKSAAFDVIFIDPPYAFATEDCNQLLSDMVAHGIAGGNTTIVLERSARSDEP VPPEGWVLAEHRDYGETAVWYIESALETSEASETSGATDE >gi|197324945|gb|DS990229.1| GENE 264 276948 - 277550 1035 200 aa, chain + ## HITS:1 COG:CAC3314 KEGG:ns NR:ns ## COG: CAC3314 COG3560 # Protein_GI_number: 15896557 # Func_class: R General function prediction only # Function: Predicted oxidoreductase related to nitroreductase # Organism: Clostridium acetobutylicum # 6 198 7 198 198 197 50.0 9e-51 MSNSIEELKARRSQYALTSESPVSDQEIVKTVEDVTVQVPSAFNSQPQRAVVLFGDANQK LWNIVKETLRKVVSDDEAFKGTEAKINAFAAGHGTVLFYDDTDVTKQLQKNFPTYAANFP GFARDAAGMLQLAVWTALAEKGLGASLQHYNPLIDEAVSAEFGLPPSWVLQAQMPFGTVA QAAAPVDKQPVDSRVKVFGL >gi|197324945|gb|DS990229.1| GENE 265 277700 - 278152 655 150 aa, chain - ## HITS:1 COG:RSc0200 KEGG:ns NR:ns ## COG: RSc0200 COG0071 # Protein_GI_number: 17544919 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone (small heat shock protein) # Organism: Ralstonia solanacearum # 43 139 39 134 140 73 40.0 2e-13 MAMFPALMNDTMFSDLFDDPFFEGWRSADNSAAMTPTNMMSTDVRENDKGYDVDIDMPGF KKDDISVSLNNGYLTVSAHKDEGSGDKDESGKWLRRERYVGTCSRSFYVGDQVKENDIHA NYQNGTLCIQVPKIEAQPQVESKHQIAIEG >gi|197324945|gb|DS990229.1| GENE 266 278399 - 279496 987 365 aa, chain - ## HITS:1 COG:Cgl2001 KEGG:ns NR:ns ## COG: Cgl2001 COG0336 # Protein_GI_number: 19553251 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA-(guanine-N1)-methyltransferase # Organism: Corynebacterium glutamicum # 34 349 15 288 292 223 43.0 5e-58 MRFQSAGADEPATHPGVSRRSCRRTAGFATLENMKIDIVSVFPEYFDVLNLSLFGKAQEK GLVTVTAHNLRDWTHDVHHSVDDTPAGGGAGMVMKPEVWAECLDDLLGLAPAVIAPDAVS SDAHDDDSASVSPSGAVNSAEAADTTDAADSGHAGNPTDAAASVTSIVSDTTSDTSEAGG NAAPVLIFPNPSAPLFTQRDATELSHADHLLFGCGRYEGYDARIPEYYRAQGVDVREYSI GDYVLNGGEVAVSVMLEAITRLLPGFMGNPDSIVEESYTGGNALLEHHQYTKPATWRGIA VPPILTSGDHGKVDRFRRDEALTRTNDIRPDLIEQLDCRQLDKQDRKTLIALGWEVSGAR PRKLK >gi|197324945|gb|DS990229.1| GENE 267 279658 - 280260 749 200 aa, chain - ## HITS:1 COG:ML1616 KEGG:ns NR:ns ## COG: ML1616 COG0806 # Protein_GI_number: 15827851 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RimM protein, required for 16S rRNA processing # Organism: Mycobacterium leprae # 16 197 10 177 179 87 35.0 1e-17 MERQQHSDDPQQRELLRVCRIGRAQGLKGEVTVQIFTDEPEYRFAPDSVLYTRDGSQEYV VEYARTFKNRWIVKFEGIDDRDASEAANGIELYGEADDPEDMLEEDAWYPKDLVGLEARL AEGNGLGLPAGQVIGKVVDVLDSAQTLLKIRLVSPVRDTVTGEVTESTALVPFVDELVPD IDLEEGYLTIDPPGGLIPGL >gi|197324945|gb|DS990229.1| GENE 268 280269 - 280502 276 77 aa, chain - ## HITS:1 COG:MT2976 KEGG:ns NR:ns ## COG: MT2976 COG1837 # Protein_GI_number: 15842451 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein (contains KH domain) # Organism: Mycobacterium tuberculosis CDC1551 # 1 74 4 77 80 63 48.0 7e-11 MLAQAVEHLIKNIVDFPDDVSVKSHENARGELIRVRVNPEDIGRVIGRSGRTANAIRTVV QALADHKVRVDIMDVRR >gi|197324945|gb|DS990229.1| GENE 269 280505 - 280954 740 149 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224282419|ref|ZP_03645741.1| 30S ribosomal protein S16 [Bifidobacterium bifidum NCIMB 41171] # 1 149 1 149 149 289 99 2e-76 MATKIRLKRMGKKFYAFYRVVITDSRNKRDGQSIEEIGTYNPNTQPSTIQIDSERAQYWL GVGAQPSEPVLKLLKITGDWQKFKGLDGAEGTLKTVEAGPDAAARVEAVEAEAQKLKAAK SAADAKAKAEAEAAAEAEAEAPAEEAQAE >gi|197324945|gb|DS990229.1| GENE 270 281181 - 281378 172 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139564|ref|ZP_07801757.1| ## NR: gi|313139564|ref|ZP_07801757.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 65 5 69 69 114 100.0 3e-24 MLESLVGIHWRRIRGYLHFEGLIRVVPNAYLRFEGLVTKYKRPKNRMIPVVFRRSYFGYR VLAPP >gi|197324945|gb|DS990229.1| GENE 271 281531 - 283321 1721 596 aa, chain - ## HITS:1 COG:BS_ydfD KEGG:ns NR:ns ## COG: BS_ydfD COG1167 # Protein_GI_number: 16077604 # Func_class: K Transcription; E Amino acid transport and metabolism # Function: Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs # Organism: Bacillus subtilis # 107 596 13 476 482 387 41.0 1e-107 MPIGATYANPIVKPWKYRPIITPDNHLVGSSSPNQNQPICHQLDFLTRIASYTKSALFQH LCHILQIRLHLATSQEQSNAPNQKSGIMTRSTPLDINWEPDRSSGEPITEQIVGFMCARI SSGDWPIGSRLPSQRVLAERFGVNRSTIIAAIGELADYGIVEGRHGAGTRIASNTWSLML PGAPDWADYVSSGFFKANNDTIQTINRLEFDRSKTRLGTGELDPRLFPRDMWRRVAGEAA AEISSLGYPPPEGLDVLREAIAAHMEAWGISCTPGQVLVSSGALQALQMISVSLLSAGST VYAEAPSYIKSLQVFQSAGMKLAGVPMDEHGLDVDALGRLMGGGSQSEGMTATVPSAPQT SLPPRAKATRENDAVLYTIPTNHNPTGVTMSEPRRRALIASCVANRLPIIEDCAYQDLIF DGDTPHTLKSFDETGMVITLGSASKALAPGLRIGWIVADERIVQRLADVKMQMDYGASTL SQWVFARFLSSGLYDEYMVSLRMQLRRRRDAALETLERLFAGRAHWNVPRGGFYVWLTFD EPVRTGRLFQRAIEHGVLLNPGDIYDFEGDNSLRLSYSYTTPEEFAAAAETLASLV >gi|197324945|gb|DS990229.1| GENE 272 283263 - 283955 719 230 aa, chain + ## HITS:1 COG:FN1861 KEGG:ns NR:ns ## COG: FN1861 COG1279 # Protein_GI_number: 19705166 # Func_class: R General function prediction only # Function: Lysine efflux permease # Organism: Fusobacterium nucleatum # 1 225 1 198 207 194 48.0 1e-49 MGLYFQGLTMGLAYVAPIGMQNLFVINSALTRTRRNALITAVIVIFFDIVLSLACFFGIG ALMQAHPWLQTVVLGLGGAVVVRIGLGLLLPKKKSTSENGAGAGAVAAATASTASPVAGA EAPAKRLGLRGLLKTVGTACVVTWFNPQAIIDGTLMLGAFAATLSAQQATPFITGVETAS VMWFLGVTLVVNALAHKFNPKIIGVLNRVCGGIIVLYGIKLLVDFAMAVL >gi|197324945|gb|DS990229.1| GENE 273 284225 - 285397 819 390 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0334 NR:ns ## KEGG: BBPR_0334 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 390 1 390 390 759 99.0 0 MGVLSWILLAACMLWSALRFLPAGREAHMPTMPYMIALIRFLWIPYLVIAVWAGLVGSWW QCGVAVAGIVSILAMQVPYWTNMPRERWHHQRGTSHETASDDHRQTARSADAEPTANPPQ ASGDTYHLMTLNCRYGKASADAIIAAVRERHIDVLALQELSTDLIKRLERGGLHRILPYR QLGTPREKTDNGGFNGIWSRTKPKRGTHGIVSIPAADVPGIMLQTDDGTSVAFASAHTKS PMRGCREWSDGIRSLSALVPMPRKSVSAGTGREERATGSKGGRDGGSAYPDVDIAVLMGD LNADIDHASFRELLRSGFRDAALAQARGHVNTFPSQVPWPRIELDHIMAATRESASGSAA EPARAVAFSGVESFVVEDTDHLALTATMTI >gi|197324945|gb|DS990229.1| GENE 274 285573 - 287219 2342 548 aa, chain - ## HITS:1 COG:Cgl2009 KEGG:ns NR:ns ## COG: Cgl2009 COG0541 # Protein_GI_number: 19553259 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Corynebacterium glutamicum # 4 495 2 480 547 516 59.0 1e-146 MAAFSSLTDRLSNAFKHLKSKGKLSEADIDGTIREIRRALLDADVALDVVRSFTARIRER ALGTEVSEALNPAQQVVKIVNEELTDVLGQGVDRPLNFAKNPPTIIMLAGLQGAGKTTLA GKLGYWLKDSGHTPLLVAADLQRPNAVTQLQVVGERAGVPVYAPEKGVQSDGGDSVSAPG ETSGDPVKVARDSIALAKQKLYDTVIIDTAGRLGVDEVLMQQARDIRDAVNPNEILFVID AMIGQDAVQTAKAFDEGVDFTGVVLSKLDGDARGGAALSVASVTGKPILFASTGEGLKDF EVFHPDRMASRILDMGDILTLIEQAQKQFDEEEARKAAQKMAEGEFGLDDFMDQLQQVRK LGSMKSLLGMIPGMAQHRKELEQFDEKEIDRTEAIIRSMTPEERRNPKIIDGSRRARIAY GSGVTVSAVNGLLQRFEQAAKMMKRMSNKAMGGIPGFGGPAVGGGKKGKGKSKKKGSKSG NPMKREAEEKALRDKLAGKGSGSGKSGGSAFMKKPQNPALPAGLQDALDANGGELPPNFG GGLSGLLG >gi|197324945|gb|DS990229.1| GENE 275 287579 - 288487 1336 302 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0346 NR:ns ## KEGG: BBIF_0346 # Name: not_defined # Def: conserved hypothetical membrane spanning protein of the cation efflux family # Organism: B.bifidum # Pathway: not_defined # 1 302 1 302 302 581 99.0 1e-164 MPHQKTIERKALIVGIVINILQVLAGMAVFFMTGLKAMFLDFSFTAISVLSGLVAAYLSS RTVRTTERFPNGMFALEPIYAICKAMLTMSLLLFSLVDVTRVAYDYFVLGQGGRIETGPV VIYEILTVAVCLGLYLYYRRENRRIRNSSTMLTAECKSTLVDGSMSFGIGVVAVFLWFLP AGGPLDFLHYTGDFFITVALVLLTIKEPFGVLKDAFVELVGGVHDDDATNAFVESAAQRH LPQNTDYEQVLVFKTGMNYTVDVYLSGIGQSIDVEDLVECKRDLEKELTKRLHIVDVDFV FD >gi|197324945|gb|DS990229.1| GENE 276 288717 - 290339 2335 540 aa, chain - ## HITS:1 COG:Cgl2589 KEGG:ns NR:ns ## COG: Cgl2589 COG0215 # Protein_GI_number: 19553839 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Cysteinyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 25 540 3 460 460 414 46.0 1e-115 MTQASEPQNSNTSENAGVARAAAGLKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPH IGHIRAAVAFDVVRRWMLRLGYQVTFVRNVTDIDDKILDKAAVAGQQWWARAYFYEREFT QAYDTLGVLPPTYEPRATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPH YGELTHQKQGAAEADEAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAP KPTDPQDARWSTPFGVGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRA AGYESAARWMHSAWVTAKGEKMSKSLGTGLSVPSVLAEHSAWVVRYALGSVQYRSMLEWS DQALVEAQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGAT AAIFTAIRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGAD GNGESREHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIEDGPQGSTWSLK >gi|197324945|gb|DS990229.1| GENE 277 290486 - 291211 902 241 aa, chain + ## HITS:1 COG:slr0541 KEGG:ns NR:ns ## COG: slr0541 COG0518 # Protein_GI_number: 16332036 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase - Glutamine amidotransferase domain # Organism: Synechocystis # 5 189 2 188 236 118 37.0 1e-26 MTQSQVLIVQHVPWEKPGRILDNLDDLNMSSTVVNIAKEKKPDLPDFAQVAGLVIMGGPM GALDYDKYPGLKVEAKLVKAAISVGKPVLGVCLGHQIIATALGGKLSRGESPEIGFAPIK RVDKHNYFSMWNKQIDVLHWHNDVVGLPAGAQLLARSEHTKVQAFRIGSALGMQFHLEVT PTLLEEWLDESSMVKDLKAVGGSKSQLREAFAEYNPRLQPLAEQVFGGFAARCNTYAQSL R >gi|197324945|gb|DS990229.1| GENE 278 291320 - 293440 2958 706 aa, chain + ## HITS:1 COG:Rv1668c KEGG:ns NR:ns ## COG: Rv1668c COG0488 # Protein_GI_number: 15608806 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis H37Rv # 6 306 5 304 372 337 56.0 5e-92 MPTYDLGLEHVSLAFATKTIFTDVTQGVFEGDRIGIVGRNGDGKSTLLHLFKGTQEPDSG RVTKRGGLTFGMLDQRDPLDDDATVRAAALEGREDYEWAADNKSREIVEALLGGINLNAR VGSLSGGQRRRADLARLLLKDWDILALDEPTNHLDVVTIHWLAEHLKNRWSKGQGALLLV THDRWFLDEVCESMWEVHDGVIDPFEGGYSAYMLQRVERDRQADVRETKRRNLARKELAW LSRGARARSTKQKFHVKAARELIADVPPMRNAVELKQMATSRLGKQVVDLIDVTQIFAKS QGEQPVTPTDDTAADQAPASSSQIDIVPSLYSEPRVTGSVEVAVDTLADPRLVDAGVPES IQAAAEAKAKAEALAERKGVTEESVAPQVTSAAQKITVAGRKILDDVTWLIGPGDRFGIV GANGAGKSTLLKLIDGTLTPTAGHVNIGKTVKFAVLSQRLDELEKLGKYKIKEVLSRYKP SYIVDGKEVTPGQLMERLGFESAQLMTPIRDLSGGQKRRMQLLLILLDEPNVLIMDEPGN DLDTDMLAVMEDLLDTWPGTLIVVSHDRYLLERVTDQQFALIGGKVRHLPGGVDDYLDMI EKAKTAAPAGVSASQKEPADSGVTATADDAPKLSGKEFRETSKRISAIERKLAKLEEQKT ALEADMAAHDPSDYEGLNKLNGQLQAVSDESGALETEWMELSEKLE >gi|197324945|gb|DS990229.1| GENE 279 293456 - 293797 326 113 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0350 NR:ns ## KEGG: BBIF_0350 # Name: not_defined # Def: hypothetical protein with DUF3039 domain # Organism: B.bifidum # Pathway: not_defined # 1 113 1 113 113 203 100.0 2e-51 MSSEPSTQLKPTSAVAGGIAADLADPVSPLSTPDQGTGTAVLERPETEEQTDRSDNGDAD RFAHYVSRDRIAESKLTGRPVVALCGKIWVPKHDPSQYPVCPDCKRIYEEMMK >gi|197324945|gb|DS990229.1| GENE 280 293961 - 294461 320 166 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764798|ref|ZP_02171851.1| ribosomal protein S19 [Bacillus selenitireducens MLS10] # 1 163 1 158 164 127 43 1e-27 MHMTIAVCPGSYDPVTAGHLDVIERCARFFDEVHVVVAVNAAKTPMFPAHTRVDIIRQAL DHDGFPDVKVASTTGLITDYCKEIGATVIVKGLRQNGDYEAELGMALVNRKLAEVETLFL PADPVLEHISSSIVKDVARHGGDVTGMVPDGVVPMLDEALNHERGE >gi|197324945|gb|DS990229.1| GENE 281 294545 - 295450 1215 301 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0352 NR:ns ## KEGG: BBIF_0352 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 301 1 301 301 481 99.0 1e-134 MDESTNDDIVNVGDGNDGGAAMNPATGTEPAAQSTDAYSVTYAAAARLNDAPESAAPASV WDEMSHNPQPAAAATHENKPDISDYAKQSKPTFPISQLPDLRETLDPKADMNPEEVKSRE EFTTVYDIIDSMEATLEAAKTSLFAPSMVRVDREEFAGQLDELKRMLPVQLERASALMRE AERRLESAQTQANAIIASAQSRAADTLDEANKQAQILVGQENITDKARQRARAILDKAQA RADHLTNGADEYCTTVMTGLQEQLGKLSHDVQAGLNVLEERQRAAGEQMPHLNINDYPEA Q >gi|197324945|gb|DS990229.1| GENE 282 295515 - 296129 892 204 aa, chain + ## HITS:1 COG:Rv2926c KEGG:ns NR:ns ## COG: Rv2926c COG1399 # Protein_GI_number: 15610063 # Func_class: R General function prediction only # Function: Predicted metal-binding, possibly nucleic acid-binding protein # Organism: Mycobacterium tuberculosis H37Rv # 7 189 27 192 207 94 32.0 1e-19 MARPEDSAWAVSVAQVASRPGQSKTVDAVFPAPSGIGDEVIGVKEGADVSVHGSFDSIVD GLVLTARIEAPVAAECTRCLKPIKRDWGVDVVAFFPYEESAKARSHGKPKNEDVEIVAGE DESEDVYPLSRDGAFADLEALLRDTLVEALPLQPLCREDCRGLCSQCGVDLNEHPDHHHD VTDLRFAALAGLKAQLEAEEHGDK >gi|197324945|gb|DS990229.1| GENE 283 296258 - 296452 350 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282433|ref|ZP_03645755.1| 50S ribosomal protein L32 [Bifidobacterium bifidum NCIMB 41171] # 1 64 1 64 64 139 100 4e-31 MALPKYKTSRANTHSRRANWKATAAQTIACPNCGAPALPHMACPSCGSYRGRVYRAAIRS AHTK >gi|197324945|gb|DS990229.1| GENE 284 296602 - 297369 1136 255 aa, chain + ## HITS:1 COG:ML1659 KEGG:ns NR:ns ## COG: ML1659 COG0571 # Protein_GI_number: 15827877 # Func_class: K Transcription # Function: dsRNA-specific ribonuclease # Organism: Mycobacterium leprae # 5 230 3 228 238 172 47.0 4e-43 MTEPEPREELFSALGVTISPDLLIQALTHRSFSHEHPGTSNYERLEFLGDAVLELVSTET LFTLHPDMTEGQLAKMRAKAVSEEALSAIARDKLHVGPFILLGHGEAESGGAEKSSILCD IVESLIGATFLEHGIEGARKVVHRLIDDTLAEVATEGPALDWKTSLTVKAHELGLDEPRY RMSVSGPEYAQEFTAKATIGPKDDIIGKGTGTSKRKAQLAAAEMAWHELDRYAPALKAAR KNGSSKHRRSGSAGN >gi|197324945|gb|DS990229.1| GENE 285 297555 - 299447 2502 630 aa, chain + ## HITS:1 COG:Rv3003c KEGG:ns NR:ns ## COG: Rv3003c COG0028 # Protein_GI_number: 15610140 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] # Organism: Mycobacterium tuberculosis H37Rv # 4 620 14 610 618 669 56.0 0 MALPTPLQAFSGVPKNTASADKQTIIDGEKMTGAQALIRALEDLGVQDVFGLPGGAILPV FHAINDDTKFRFTLVRHEQAAGHAAEGYAVATGRVGVCIVTSGPGATNMITPIADANMDS VPLVVITGQVGVNAIGTDAFQEADIVGATYPVVKHSYLVTRAQDIPRVLAEAHYIARSGR PGPVVVDLTKTAQTGEMYYSWPQRMILPGYNPTTKAHGRVISDAAKLFAQSYRPVLYVGG GAVRSNASAEVAELAEVTGAPIVTTLPARGIVPNSNPKALGMLGMHGAVAATAAAQRCDL LVAIGARFDDRVTGKLDAFAPGARVIHIDIDPAEIGKNRAPDVPIVGDVSTVLNDLIPEI KRSQAIGGKPNLKPWWDELNRLREEYAIDYDQPCDKPTDGSLAPQWVIKQLSDHADPSTI WVSDVGQHQMWSAQLIDFEKPHSWISSGGLGTMGFGLPAAIGASVGSQRDFKGRKPVWLI AGDGSFQMTSEELTTAFLDHAPVKIAIINNSVYGMVRQWQTLFFEQHYSQTNLADGDSKE SGEFFDVPDFVKLAEAYGCVGLRAFTEDEAIDAINKANEINDRPVLIDFRVWKDAMVWPM VAAGASNNEVAYRPGTQPLLHKGVDDGDQA >gi|197324945|gb|DS990229.1| GENE 286 299483 - 300037 933 184 aa, chain + ## HITS:1 COG:MT3082 KEGG:ns NR:ns ## COG: MT3082 COG0440 # Protein_GI_number: 15842560 # Func_class: E Amino acid transport and metabolism # Function: Acetolactate synthase, small (regulatory) subunit # Organism: Mycobacterium tuberculosis CDC1551 # 9 172 1 164 168 168 56.0 5e-42 MAMYPASRLGSERHTLSVLVENRPGVLARIAGLFARRAFNINSLSVSPTERPDISRVTVT ADVEAVPLEQIIKQLNKLLHVLKIVELDPNTTVERELVLIKVAANESNRSDVLEIVRLFR VRVVDVNPESLTIEATGAEGKIDALLGLLEHYGVIELVRSGAVAVTRGPKALSEKVIGSE IKGR >gi|197324945|gb|DS990229.1| GENE 287 300458 - 301360 726 300 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0349 NR:ns ## KEGG: BBPR_0349 # Name: not_defined # Def: nicotinate phosphoribosyltransferase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 300 33 331 331 549 98.0 1e-155 MTRHFGKPLFDAKSLASNLHDVAAVFDLVTPKAAWGGLSAALPEGAAMTRTQFDSMQELV EFITDDDGHIDESAADEVFQYLTQLQGEARHLREGLKVSNDRLESMKQKMMQKQRENSYS DGRQYCKSPLPLFADKAEGKRFEREQMDMLVRREWATRFGPEEKKSHALPRTWAYSDWFF DTLASTHISVSKVVAVMVEVLTGLDIELAGREGLQYGDFGGDYRLAFHQALRGDRQFAQG LGPVFVRVGDGGVTLITRIDVTVVDVVDQQVFPSLSRTILGQLGFRSGDHMFRLGQTILI >gi|197324945|gb|DS990229.1| GENE 288 301097 - 302419 1574 440 aa, chain - ## HITS:1 COG:Cgl2467 KEGG:ns NR:ns ## COG: Cgl2467 COG1488 # Protein_GI_number: 19553717 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid phosphoribosyltransferase # Organism: Corynebacterium glutamicum # 5 435 13 437 446 369 49.0 1e-102 MVDYSPALMTDMYEYTMLDASLKDGTANRKCVFEVYTRHLPEGRRYGVVAGIGRILDELS RFLLSDEDLRFLSDRKVVSKETISWLENLHFSGSIKGYREGEMFFPNSPILQVEGTFGEC TLLETLVLSVLNYDSAVASAASRMVSAAKDRPCMDMGGRRTNEWAAVAAARAAVIGGFQG TANLLAAQLYGLKAIGTAAHCFTLVHDDERSAFASQVEALGRNTTLLVDTYNVEEAVKTA VEVAGPQLGGVRIDSGDLAAMAQRVRNQLDALGATNTKITVTNDLDEYALAALQSAPVDS YGVGTMLVTGSGAPTCAMVYKLTERENSAGVMQPVAKKSKDKASVPGRKLAYRSYEYGLA ETEHVISGSETQLAEYRPAEGWKDLLVDYVDHGDIDSRYQGHAAIADAHEYRAKALRELP ITAQSLMKGEPVIPTEITVL >gi|197324945|gb|DS990229.1| GENE 289 302622 - 303353 921 243 aa, chain + ## HITS:1 COG:Cgl2451 KEGG:ns NR:ns ## COG: Cgl2451 COG0689 # Protein_GI_number: 19553701 # Func_class: J Translation, ribosomal structure and biogenesis # Function: RNase PH # Organism: Corynebacterium glutamicum # 4 242 22 258 258 277 63.0 1e-74 MVIRADGRVVDELRPVRITRHFTDVPEGSVLIECGNTRVMCTATFTPSVPRWRKDSGLGW VTAEYSMLPRATAERTDRESVRGKVGGRTHEISRLIGRCLRGVVDMKALGENQIQIDCDV LQADGGTRTASITGAYVALVDAMRWAEQKRHIRSADRVLKDAVSAVSVGVINGTPMLDLP YIEDSQAMTDMNVAMTGSGDFIEIQGTAEHRPFNRAELNTLLDLAEKGNKELQAAQRAAL SLD >gi|197324945|gb|DS990229.1| GENE 290 303433 - 304101 384 222 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|74313511|ref|YP_311930.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Shigella sonnei Ss046] # 2 217 3 194 197 152 44 4e-35 MKLVVATHNEGKLVEIRRILEEDLGADAAQVELVSAGSLGLPDPVETGVTFQENALLKAR FVAGLTGLPAIADDSGLIVDVMGNAPGILSARWAGEHGNDPANNALLLAQLSDIPDAART ARFRCAAALAVPDSAAPVAGGRHAIVSETVEIGEMPGRILRAARGEHGFGYDPLFVPDDQ PERAAADHPLTSAEMDAAEKNAISHRGKAIRALVPAVEALLR >gi|197324945|gb|DS990229.1| GENE 291 304223 - 305224 1260 333 aa, chain - ## HITS:1 COG:L181807 KEGG:ns NR:ns ## COG: L181807 COG0679 # Protein_GI_number: 15673902 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Lactococcus lactis # 75 331 9 238 238 92 26.0 9e-19 MTAILKPIAFLLIIVAAYLVKRAGLFKPRDYRVMQVVVFDFTLPASIIVSFATNPHHLSM LLISVFAIVFGLLPLLLVYAATRHKPVADRAFLMLNCSGFNIGNFCFPVIQTFMGPSALV TASMFDIGNSVIVTAGSNVMTTSLLHIDMDRPLTEQHAGAAPTLPYSKPRDKDARRLARR AKAKQILKGFLTSVPFNVYLLMIVVMLFSIHIPAFVPTLLQPVADANSFCSVFMVGMLMD LPRTGKDVGSVLRVLGWRLPLGVLFAAACWFLLPFDASVRKTAVMLSLAPTAVFSTLFTD RVLGNAKLAGFTLSVTAVISIVLMTIVNFVIPA >gi|197324945|gb|DS990229.1| GENE 292 305728 - 307425 3091 565 aa, chain + ## HITS:1 COG:MT0972 KEGG:ns NR:ns ## COG: MT0972 COG0166 # Protein_GI_number: 15840369 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 1 563 1 549 553 647 57.0 0 MAINPPVDATKTPEWAALQKHYDELQAEGVSLKQWFADDAERVDKLSFDAGDLHFDLSKN LIKPETLQLFADLAKAVKLDERTKAMYTGVHINNTEDRAVLHTALRRPVEDEGKYIVDGQ DTVKDVREVLDRIYAFADEVRSGKWTGVTGKKIETVVNIGIGGSDLGPVMVYEALKPYAD AGISARYISNIDPNDLAEKTKGLDPETTLFIIVSKTFTTLETLTNAREARTWLLEELKAK GAIDGSDEKNAEAIKKHFVAVSTNLEKVAEFGIDPNNAFGFWNWVGGRYSVDSAVGTSLA VVFGPARFEEFLHGFHEIDEYFANTPFEKNVVVLLGMLNVWYRNFFKVASHAVLPYDQYL HRFPAYLQQLTMESNGKSVRWDGTPVTSETGEIFWGEPGTNGQHAFYQLIHQGTQLIPAD FIAFVNTPNPTKDGDQDVHELFLGNYFAQTKALAFGKTADEVRAEGTPEEIVPARVFAGN RPTTSIFGVALTPFALGELIALYEHITFVEGTVWGLDSYDQWGVELGKQLAKQITPAISQ DDDALAAQDASTQSLIKFYRANREF >gi|197324945|gb|DS990229.1| GENE 293 307445 - 307687 116 80 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKRFPTADLIDPEHHPSSQVIDITSHGIYSNVPRHPKRPGHMYSCGQLLEPNRRIRTRAM DGRQTDHQTTQRGAPTASSD >gi|197324945|gb|DS990229.1| GENE 294 307918 - 309060 1374 380 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0364 NR:ns ## KEGG: BBIF_0364 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 380 4 383 383 712 100.0 0 MKAQKSWDTPVADETRDVSDASEDIHGITDDITDDAESAEVDAEAVTLLRKRHRRMTLLV VVVIVASLVSGFCWRRSLQTGSPVNCSHQTGVADEKDYCYGGFKPLQPSGPQLGRSQAGP YFAKAVKGTAAAYDAVRLAAVGGDKDAVNKSAAKARDLSQQAAETLAARTWPKSLTKQIR MVIIEYQERAAIYTNLAGNRNGEAIDWMVFGEFRPSGAQQVIRSALKLPDEPETAVPFDI RDIADGGACKGLETTKDGGQQEVDRHCFTVTVTDQVPAEITGLSIKFNLLSEDGTIRETG VRASSDIQFDDDGDIIEHGGIHKGDTVKLTMEIDPKLLRGGDRFVPSAWYVEDKAGEQHL ASFTAVQSGGYDVLNAFKVR >gi|197324945|gb|DS990229.1| GENE 295 309066 - 309887 751 273 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0365 NR:ns ## KEGG: BBIF_0365 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 273 4 276 335 489 99.0 1e-137 MSEHDFDGDDDIFSKSGRFGGNAEKRKDPAKPGGFGKSGNAGKPKDSTASSAGEGDAEAM RHLEHEFAAIDRESHRTVAVVFAAIAAVVALIFFGLQIRDKTTLLIFHDNPPIGYLPVSE YSLRQPSTGKPISSARTWHYPSQYTILSDDATSSGVKRGARCRIDKRDCDHALVTSRGVQ PGDSWGDFVKRYGDVTAYEITVDDDESGRDDSYMSDEDQAAASDLREQHGITIDDFDRDY IQTGKVDLSRNRLTVRFRAVLYDTTVLYTEADQ >gi|197324945|gb|DS990229.1| GENE 296 310076 - 311194 1110 372 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0366 NR:ns ## KEGG: BBIF_0366 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 372 1 372 372 590 100.0 1e-167 MARLHDSRHGSDADGIDDDDMPLTHEQAVVEADAELRRMTYHPVRKAVGIVVAMGVAIGA SLGVGYMFGGDPGGIVTAITGVVCPQDAKYALDGDAPFVNTSDTSEHPAKGARLSEKDAG QYYLEAVKPSIQPLRDAMNTLYGGDLKATRAAAGKAATVLRATAKALRSRTWPDEVANAA AVVANEYDAKARQASYVADSVTPSASDELISLDAYGVSEADVYLRGKLGLPAAEAPSAPL EITGIEDRGIQQGADAGGSTVDTGKRIIAVTVRSHVPGTLSGLNLTFDLKKGKTTLGRIS GIMDDIALAEGQSIVVPVPVDIGGDDGGIAGATMSWDSWSLTDWRGESHIAAASDDFAEY APDKVMGTFTLR >gi|197324945|gb|DS990229.1| GENE 297 311578 - 312072 539 164 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0367 NR:ns ## KEGG: BBIF_0367 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 164 1 164 164 283 100.0 1e-75 MPTGKLTSFGLKAVDSDKWDGNIREAIAVAGKDGQKLVLLYNAVVAKAAVDDQVTNSATA NYNGGADSEAATTVVKLGFFTMKKIDKQHNGIGGALFSVSDSGGNAVVFEKGSANGSWVR AADQSVKVDNVTYFTSIPTNAGGLSHWRATRLIIRGGQIHDADS >gi|197324945|gb|DS990229.1| GENE 298 312082 - 312819 923 245 aa, chain - ## HITS:1 COG:PA4635 KEGG:ns NR:ns ## COG: PA4635 COG1285 # Protein_GI_number: 15599831 # Func_class: S Function unknown # Function: Uncharacterized membrane protein # Organism: Pseudomonas aeruginosa # 17 243 8 233 234 145 41.0 6e-35 MTVWTAIVTSQVFAITLRILLSIGLGALIGLERQLRARSAGIRTNALVSLGSCLFTTVGV YTLAAGTGDPTRVAAQVASGIGFLGAGVILKQGVSVSGLNTAATLWASAAVGTLCGSGME AAAAIGATAIMLANMMLRPIGAAIDARRTAQSHEAEGIRYTLEVKCLRKDEQAIRALVFN ALHQPGFIVQSIAASDLPDDLVVITTVVATHMSSNIDIESSIETVITTPEVLGVKWDAEQ ITAVD >gi|197324945|gb|DS990229.1| GENE 299 312949 - 315738 2476 929 aa, chain - ## HITS:1 COG:L85514 KEGG:ns NR:ns ## COG: L85514 COG0474 # Protein_GI_number: 15673239 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Lactococcus lactis # 17 929 23 910 910 669 40.0 0 MNTLRLIRWRGERHASITQRLNFAAHATPEATLALVYAHESGLEPDEVRQARRAYGGNTI PAPDVHESPARRLVRAFMNPFIGVLMLLALTSFVCSLAQRGIVTSGTTAANGGGTPVTVG IILLMAVVSGLIRYVHDSRSSHAATALATMVSTTATVRRVGAGERQIPSEELVVGDIVTL SAGDIVPADCKLLESRDLRIAQGALTGESMPVRKDAAALLAAGARDTALTDAACLVFMGT TVISGSALAVVIATGRSALFGGLSRAFQWQRPRTRFERGMNSTSWMLMAFTAVTVPVSML VTGIASGDWLQALLFGVSVAVGLTPEMLPLIVTVCLSRGARTMASGKAIVRRLDAIETLG GMDVLCVDKTGTLTSGVIKLDRAQSMSGLNSSYVLHAAWLTTLIPHTTSNPWDDAIVAAE GDSANDTGDVQVEGGTPFDPIRRRATVIVAKSHHRADREHTGGSDISETSGAGAGTSGNV SRIMVVKGAVSEMPPRCDTVMRNGTAEPLTDRLRGTYERLMADKATHGYRVLLVAQRSVT DQTTVQDDRALTLLGYLTFLDLPKPDAADTIAHMHNAGITVTMLTGDEPQVARTVARKVG INARRVVTGRTLDDMTDTALGTELRRVNVFAKLTPEHKARIVSLLRREGHCVGYMGDGVN DLPAMHASEIAISASTGSEAVRQSADVMLTHKNLDVLLRGITQSRRTCVNMMKYIKLALS SNFGNIISVMIAGAFLPFVPMAPVQMVLLNLIYDLACLAIPWDRVDGDVLRSPARWDTAS IARFMSRFGPVSSLFDMVTFTVLLTLLCPAVAGGRFPELHGDGSRLLFVAAFQTGWFVVS MWTQITALHMLRTERVPFIGSRASVPLVCTSLAALTIATALPFTPVGAWMGFHVPPVSLF ALLAIVIAGYAVTVLAVRTLYLHRQQPLL >gi|197324945|gb|DS990229.1| GENE 300 315826 - 317325 1614 499 aa, chain - ## HITS:1 COG:XF0412_1 KEGG:ns NR:ns ## COG: XF0412_1 COG1116 # Protein_GI_number: 15837014 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component # Organism: Xylella fastidiosa 9a5c # 24 282 10 262 266 283 56.0 6e-76 MTIATFSDHTATFPQTAATNAAGTAIIEARHVGKTYRAERGKELTVLRDISFTLHEGEIV AILGRSGAGKSTFLRILAGLVPASSGTVTYHGTDITGPNPGVGLVFQTFALMPWLTVQAN VELGLEARGVPREERRRAALQAIDAIGLDGFENAYPKELSGGMRQRVGIARALVVQPDAL FMDEPFSALDVLTAENLRNEVLKMWSGNQRSIKSVLIVTHNIEEAVQMADRVVVLGSHPG HLIADMPVTLPRPRDRHSAQFEAMVDTLYAILTGQSRDGGPADTADERTAAGDGVAHGTS DGAANQTAAADQAPARASDADHQASSDMLPNATPGGLAGLVEIVYDHAQGIDLADLAAEL SFEVDDLFPLIDAGTMLGLLTVENGHVTLTELGRQWRQADILTSKTMFAAMLQDKAPLVR IIDRAVRHSEHGRLRGELIVDLLRARHTDAEAERQFNIAMTWGRYGELFDYDADDDIITV DAANPANATRAAEEASETD >gi|197324945|gb|DS990229.1| GENE 301 317451 - 319232 2141 593 aa, chain - ## HITS:1 COG:RSc3371 KEGG:ns NR:ns ## COG: RSc3371 COG4986 # Protein_GI_number: 17548088 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type anion transport system, duplicated permease component # Organism: Ralstonia solanacearum # 36 589 30 583 586 442 47.0 1e-123 MSNFFNYSSFPGIRPRSGADTADMSRSGAVRRIAADVVVAAGVLALFGVVAWLLPQINEP IGPSGVPSTVSDDLHLLPYYALRSVFRMFIALFLSLVFSFIYGLAAARCRRLRMVLIPLL DILQSVPILGFLSATVTIWMVLFPGSILGVEAASIFAIFTSQAWNMTFSFYHSLLSEPQE LDEAARSMQLTRWQRFWKLDVPNSMIPLLWNCMMSVGGGWFFLTASEMISVNNRTYALPG LGSFVAVASEHEQLGKVLWAIVTMVIVVLLIDVLLWKPLTAWAEKFRITQNESVQAKTSL VLSILRRSGISDALALVGRPIADLMFWLTRPLGRTGARWPAAGTRRRTLDIAFMALMAVA CLAGLWMLVRFISDGEGFAEVGHAMVLGLITFMRVTLLTVVCSIIWVPIGVKIGMNPRIS RFAQPLVQVLASFPSNFTFPFVTLWFIAWHIDISWGSILLMSLGTQWYILFNVIAGASAI PDDLREATRAFHLDTRQRWTKLILPAVFGSWCTGGITAAGGAWNASIVSEIVTYGHTTLT ANGLGTYIANATAVGDTGKTIIGVAVMSVFVVGVNRLFWRPLQAYAERRFSVA >gi|197324945|gb|DS990229.1| GENE 302 319532 - 319702 188 56 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0372 NR:ns ## KEGG: BBIF_0372 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 56 1 56 56 88 96.0 8e-17 MDGDLGHSSRLRDGGQHHMPSGAAYGPFSSHVCTATMALAVRHDTAASGEGDPITD >gi|197324945|gb|DS990229.1| GENE 303 320040 - 321008 1241 322 aa, chain - ## HITS:1 COG:YPO1810 KEGG:ns NR:ns ## COG: YPO1810 COG2390 # Protein_GI_number: 16122062 # Func_class: K Transcription # Function: Transcriptional regulator, contains sigma factor-related N-terminal domain # Organism: Yersinia pestis # 4 321 3 319 325 148 33.0 1e-35 MVANKLTMTTTESRNHIELVLKIARMYYTDNLTQAQIAAQIGYSRPTISRLLSESRDRGM VRIEIGHPLERLMQLEDALVRRYGLKCARVAQVNPGQDPSTIVPRYAAALLTEKSSPDSL ITVSNGRAVAATVREVAIQDWPKSNVAQMVGALSPSNPMTDSPDICRMLAERLGGTVTTL HVPMILSSAHIAAAMRQEPQIATALALGGGADVALEGVGATEGDRLSPVFDAYVTPHMVK EIRAQGAVATVCGHFIDAQGRPVCSELSDRIISVELDRLKRIALVIGVAWGQEKVKAIKA CLVGSYISALATDQATAESLLA >gi|197324945|gb|DS990229.1| GENE 304 321357 - 322619 2042 420 aa, chain + ## HITS:1 COG:SA0238 KEGG:ns NR:ns ## COG: SA0238 COG3775 # Protein_GI_number: 15925950 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIC component # Organism: Staphylococcus aureus N315 # 2 417 6 419 419 304 40.0 2e-82 MEIINTIIGLGASVMMPIIFFVVGLIFRMGIGKSFKAGMTVGVGFVGVNMVINLLLDNLG PASKAMVNRLGLHLTTVDVGWPTASTVGWGTPIMVATVVGFLVINAIMVFCKLTKTIDVD IFNYWIFLQVGALVYAVTSNFWFAVIFTWVIFAIVLKVADLTAPYIQKEYNLEGISFPHL AGLAWSPLAIAVNWIIDKIPGLKNVDFNADKIRKRFGAIGEPVVIGFILGLLIGVLAGYS PDKSVTLAINIAAAMVLLPKMIDVLIEGLISVRDAAEKQLKIWFPNREFYIGMDTALLIG DSSVLATGLLLIPITILLAFILPGNEMLPFADLASLVFILALVTPFVRRNMFKMLIVGTL SVIIILYVGTDIAPWVTQSFTQSNIDLPKDFTAVTNMTGAVSTWIGWVAVKIGELFNMIA >gi|197324945|gb|DS990229.1| GENE 305 322662 - 324185 2058 507 aa, chain + ## HITS:1 COG:lyxK KEGG:ns NR:ns ## COG: lyxK COG1070 # Protein_GI_number: 16131451 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar (pentulose and hexulose) kinases # Organism: Escherichia coli K12 # 5 500 2 495 498 310 35.0 5e-84 MTNATKHFLTIDNGGTNTKVIIVDQDGRQLSVSSFPTDAIERRPGFREVNPGQMWRDIGK AVKAALESAGLDGSQIDGVVPVGHGKGLYVLGKDGKPFMDGILSSDSRAADLANEFESRV AEIYPISHQHVMVMQFPVLLRWLKDNEPEQYARIGHVLSNKDFIRYFLTGEILEERGDAS GNNLVNLETGEYDGRLFDFFGIPEMLECMPKLVSATDRCGSITAEAAANTGLAEGTPVYA GLFDIDACALATGVLSDDIFSITAGTWNINVFPSKTMAPLDGGCMNSVFPTGDTLVEASS PTSAGNLDYVLRMMTADGSKAASYDELGAMLERTDAKYTDVLFFPFLYGSNVNLGAEGAF IGLRSSSERDQLLRAVYEGVVFAHRHHVEQLLRVLGHKPKAIRISGGVCNSDPWVQMFAD VLNLPVETVAVTELGGLGGAMCAAVGSGLYGSFQEAFDNMSKLAKRFEPHADQTAVYDRK FEAYEALLTALDGGWAALRDMQNSLER >gi|197324945|gb|DS990229.1| GENE 306 324187 - 325077 1221 296 aa, chain + ## HITS:1 COG:ECs5173 KEGG:ns NR:ns ## COG: ECs5173 COG3623 # Protein_GI_number: 15834427 # Func_class: G Carbohydrate transport and metabolism # Function: Putative L-xylulose-5-phosphate 3-epimerase # Organism: Escherichia coli O157:H7 # 6 273 8 268 284 283 51.0 2e-76 MVTNALGIYEKALPRGLSWEQTFDLVHELGYNFLEFSVDESDERLARLDWTEHDRARFRD AMWRTHSRINTMMLSGHRRFPLGSKDPEVREKALDMMRKAIDLAVDLGIRNIQLAGYDVY YEPKTLLSREYFVENLRKCVDMAAKKLVMLSIETMDDPFINSLDKVTYYKSQVRSPWLQA YPDVGNLTAWPTNDVGREIESNIDNIVAVHLKDTKPVGETSKGVFKRVPFGEGTVDFEAC LRIFKRLGYQGSYTVEMWTDESPDPVAEVTRAKKMFDGLFDVVGIEQEPIAGIGEY >gi|197324945|gb|DS990229.1| GENE 307 325169 - 325861 775 230 aa, chain + ## HITS:1 COG:TM0283 KEGG:ns NR:ns ## COG: TM0283 COG0235 # Protein_GI_number: 15643052 # Func_class: G Carbohydrate transport and metabolism # Function: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases # Organism: Thermotoga maritima # 16 229 46 253 254 160 41.0 1e-39 MVSLADFGPEVRAEVKQVREVVAALHQQLIKWNLVVWTAGNVSQRLHSADLMVIKPSGLR YEYLTPSSMVVCDLDGNVVDGAEAPSSDTASHAYIYRNMPDVYGVVHTHSTYATAWAATG QNIPCGLTMMGDEFGGPVPVGPFRLIGSEAIGKGVVETLKKYPKSQAVLMQNHGPFTIGK DAEAAVKAAAMTEEVAHTMWAARQLGDIIEIPQADIDKLNDRYQNVYGQH >gi|197324945|gb|DS990229.1| GENE 308 325834 - 325998 75 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNGAIKPIAILNRDDCATHSGHVTSTDPHTSLAVETKSQSPHVPRRQCWPYTFW >gi|197324945|gb|DS990229.1| GENE 309 326336 - 326713 624 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282456|ref|ZP_03645778.1| ribosomal protein L19 [Bifidobacterium bifidum NCIMB 41171] # 1 125 1 125 125 244 100 7e-63 MVNAVEAFDAKHMKPAEEIPAFRPGDTVDVNVKIKEGNNSRIQTFTGVVIARQGSGLRET FLVRKISFGTGVERRFPLHSPSIDSIKLVRKGRVRRAKLYYLRKLRGKAARIVERRDNSA KATQA >gi|197324945|gb|DS990229.1| GENE 310 326816 - 327649 693 277 aa, chain + ## HITS:1 COG:alr2975 KEGG:ns NR:ns ## COG: alr2975 COG0681 # Protein_GI_number: 17230467 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal peptidase I # Organism: Nostoc sp. PCC 7120 # 94 261 36 190 190 96 37.0 4e-20 MRDGGTMRPDDHRTDRAMPGSGTEFSRDEWIVAIADHGVDPTDMPGRVVGTDGRDSLARR RKGAHRKTSPKHNNDSFSFRDLLIWCVVPFVAVLLVRIFLIGFYVIPSGSMRDTIEIGDR VITSKLTPRYFDLKRGDIVVFHDPANWLNQETTRGKGDYLIKRLIGLPGDVVECGGAGQP VKINGVAIDETSYIKSGVDPSSFSFRVEVTAGHIFVMGDNRASSADSRYHQDDGDHGLVP IDNVVGVGLMRYWPLNRMSFLSSHHDVFKDVPAGKAQ >gi|197324945|gb|DS990229.1| GENE 311 327674 - 328369 527 231 aa, chain + ## HITS:1 COG:CAC1762 KEGG:ns NR:ns ## COG: CAC1762 COG0164 # Protein_GI_number: 15895039 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HII # Organism: Clostridium acetobutylicum # 20 228 68 249 254 106 34.0 4e-23 MIEHPTLDMERQLAAQGCDVVIGCDEVGRGALAGPVMVGAAAMWSRDLAAAQVPAGVADS KLLTEHRREGIVDELRSWCAAYAVGQASNAEIDEWGISHALGIAALRALNDVERQLGMDG PAGSGRRVDVILDGPNDYITKTMNTFDAPALPIPVQVSCKVKGDRHCAAVSCAAVIAKVT RDHLMVDIAQGNPRYAPYGWAHNKGYGSAAHRDAIARLGVTPLHRVTWHLT >gi|197324945|gb|DS990229.1| GENE 312 328683 - 329762 1034 359 aa, chain + ## HITS:1 COG:lacI KEGG:ns NR:ns ## COG: lacI COG1609 # Protein_GI_number: 16128330 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Escherichia coli K12 # 1 355 6 332 360 139 30.0 7e-33 MFEVAKLAGVSHQTVSRVINDSPDVSDATRTKVQDAIKALDYRPSNSARALASHRSRTIG LIAGGMKFYGPISAISAIEMMARKHGLFMSAMMVHEALCTRAEFENLCGTFNEQNVDAFI MLTPTDVMFEAACYTQLTQPRVMITSTHGELSVSEGLRLIHSRERDRVSIVGIDQWGAMG DVVRMLTEYGHKRALYFAGPLGWRGAMTRLDAWVKLTRARSISSVTVRCKTWESTEAYAR MNHILDSIGNQGGKLPTVVVTANDNQAVGVARALYEHGVRIPRDVSLVGFDDMPAMDNMI PPLTTVRPDFEALGVAAMRQVLHLLGEGDEVALPASAHGVGLLPAEVVKRSSLGPAANR >gi|197324945|gb|DS990229.1| GENE 313 330389 - 332332 2466 647 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 43 639 1 594 600 468 43.0 1e-131 MPQDQAQDQSNAAQAAKPADEPAPSMTAPAARPVGTAAVPTIISEYTSPGDVAVNDDETL YSLLTERIARTGNATTIAARKTGPGAWSSITTGEFHRLVLAAAKGLIAFGVGKGDAVTLF SATRFEWGVLDFALAAIGAVNVPVYDTDSAAQAERIINDSGVKLAVTDNRERYDRLDSIN DRCPGLQRILMMDGNALGALEGLGVSVSDEELEARIADTHADDLATIVYTSGSTGAPKGV ELTHRNFLSVVRAGYECLGEVLCDNHPRLLLFLPLAHCFARYIQYCSIGSDDGVVGYLPD TKSLLPDLRSFKPTYLLGVPRVFEKVYNAASRKAGTGFKGRIFAQAAQCAREWSRTEQDG GKHSASQRARHAMFETSVYRAVRGALGPNIRYVACGGAPLSADLAHFFAGIGLPMIQGYG MTETAAPFTVTRVNDNKIGTVGQPAPGSSVRIADDGEVQVRGANVFRGYHNLPEKTAETF TADGWLKTGDLGSLDEDGRLMITGRKKDIIITAGGKNVSPIPMEEEIAKCPIVEHAVVVG DGRPFIGALVTLDPEGLASWLPTIGQPADLSLADVAALPQVREEIQPFVDRANATVSRAE SVRKFVVLDAQFTQKNSCLTPSLKVVRPAVNRVFSGAIDQELYAGKR >gi|197324945|gb|DS990229.1| GENE 314 332772 - 333647 1215 291 aa, chain + ## HITS:1 COG:SP1468 KEGG:ns NR:ns ## COG: SP1468 COG0214 # Protein_GI_number: 15901318 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxine biosynthesis enzyme # Organism: Streptococcus pneumoniae TIGR4 # 1 291 1 291 291 412 79.0 1e-115 MAENRAELNKNLAQMLKGGVIMDVTTPEQARVAEDAGACAVMALERIPADIRAAGGVSRM SDPAMIKGIQEAVSIPVMAKVRIGHIAEARILQAIDIDYIDESEVLSPADDVYHIDKTQF DVPFVCGAKNLGEALRRIAEGAAMIRTKGEPGTGDVIQAVRHMRTMNKQIRELVGLRDDE VFEAAKQLAVPVELARYVHDNGRLPVVNFAAGGVATPADAALMMELGAEGVFVGSGIFKS GDPAKRAAAIVKATANWQDADLLARLSENLGEAMVGINEDEIQTIMAARGE >gi|197324945|gb|DS990229.1| GENE 315 333964 - 334584 727 206 aa, chain + ## HITS:1 COG:SP1467 KEGG:ns NR:ns ## COG: SP1467 COG0311 # Protein_GI_number: 15901317 # Func_class: H Coenzyme transport and metabolism # Function: Predicted glutamine amidotransferase involved in pyridoxine biosynthesis # Organism: Streptococcus pneumoniae TIGR4 # 25 206 4 188 193 187 49.0 1e-47 MVVAVEYISKEASADAETAKHGVTGILAVQGAFAEHAAMLDKLGAQWKLLRAAEDFDDSI DRVILPGGESTTQGKLLRSTGLFEPIAAHIAAGKPVFGTCAGMILLAKRLENDDNVYFGA LDATVRRNAYGRQLGSFVSTADFGDIKDFPLVFIRGPFVSDVGADATIETEVDGRVVGLR QGNILATAFHPELTDDTRIHELFLSL >gi|197324945|gb|DS990229.1| GENE 316 334560 - 334649 78 29 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTSPLVSLPFPADKQPDPLAGAYRLKNNS >gi|197324945|gb|DS990229.1| GENE 317 335143 - 335319 204 58 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0385 NR:ns ## KEGG: BBIF_0385 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 58 1 58 58 106 100.0 3e-22 MRTVDRGFDFYFNRAKNEAVVREPAGETLLVYRGCGNADDGRAVTLKRNGVLITVSQR >gi|197324945|gb|DS990229.1| GENE 318 335411 - 336856 1178 481 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0386 NR:ns ## KEGG: BBIF_0386 # Name: not_defined # Def: endo-1,4-beta-xylanase # Organism: B.bifidum # Pathway: not_defined # 1 478 25 505 505 825 89.0 0 MLLRGETRVHDGDRASGAEAAPAAGPRADYRLRLTLDQWTPDGAVSGEITDITRLRLRFR SDYGTVTALDGSAVPQTQDLFRPLPLAVHRDDGSGIAGSTADTSRVVISVVAERLDAPVR IPDTPDATGRRGMRFFAAPELAYERGTFYLFATTDGHSEWSGWQIRCLASEDLTHWQDRG VVIDLHDQHLDGSSRTNILPGHAWVPALAVRDGRYYLYFCGDGQTNVAVSDHIDGGYALQ GDLARTGSHAARHGFGTGIVAPGIDPAAFRDPQAGRWYLAWGQNRARYSRLSDDMLHIIP EATPDIREAAYLNVREHAGTWTYYLTYSIGDINDPDYRVAYAAASTMEGDGSQWTYRGEI LVANERLGILGTGHHCILQVPGIDEWVIAYHCFLPDAMRPRGVDRYTGERIRTGNKREIR FARLEFDERDGWRAAHQTGDGIDEQPGVVMNSGDMRGGEHVIGWQRCREDDKTVADMRWP V >gi|197324945|gb|DS990229.1| GENE 319 336916 - 338028 1338 370 aa, chain + ## HITS:1 COG:BS_degA KEGG:ns NR:ns ## COG: BS_degA COG1609 # Protein_GI_number: 16078147 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 29 369 2 332 337 134 28.0 2e-31 MGKTENGKTGKSEIARNLPGSPTTAARRRVTLRDVATAAGVSLKTASNVINGTGRMTDAT RAKVEAVIEQTGYRVNVAARNLNRDRTGFITLAVPTLTAPYLSELANRVIDAARQRGYLV YVTTYAEGSATGARELLRNFNTTVSDGMILSMSEVEDISPEDLEVDFPLVVVGARTTWGK ADHVTPNDVQAAASAAGYMFDCGVKSLAVVGGRGAYDEAKLLGAVEGNAQLRLRGIIEEC RRRGVTLDARLVGNVEQEWTIGAGAHATQELIDKGVPFDGVIGLNDQLAIGALTVMRANG IEIPRQVQVIGFDNIEESQYLQIPLTTMDSRLEWTAPTAVERILERIRGEIAKPELLMTD CDVIVRDSTR >gi|197324945|gb|DS990229.1| GENE 320 338583 - 338789 191 68 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0388 NR:ns ## KEGG: BBIF_0388 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 68 1 68 68 84 98.0 1e-15 MYQKKPVPPADTIALVLSGVDDVTVEQDSEFEPLAGVSATDDVDGDVTDAVKVSGSVDAA KPGEYVLT >gi|197324945|gb|DS990229.1| GENE 321 339259 - 340143 1138 294 aa, chain + ## HITS:1 COG:BMEII1060 KEGG:ns NR:ns ## COG: BMEII1060 COG0656 # Protein_GI_number: 17989405 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Brucella melitensis # 15 292 21 293 294 262 49.0 5e-70 MLGTSDLAVAAAAASVPGIKLNDGNVIPQIGLGLLRIENDDVAPVVKSALAAGYRHIDGA AGYNNEGGVGRALAETGFNKGRKRSHLWVTTKLRDSEQGYDMALAAFDRQLGLLQLEYVD MYMIHWPTPFNWRSGATWKAFTKLRDEGRVKTLGVCNFLPEHLTRLYEETGEWPAVNQIE LHPTWQQREVVAFCKEHGIAVEAYSPMARGADLKAGNGTIARIAEAHEVSPAQVILRWHI ENGTIIIPKSVHSERQRQNLDLFGFALTLDEHAAIDALDGPERAGHDPRTFSYA >gi|197324945|gb|DS990229.1| GENE 322 340321 - 340998 849 225 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0383 NR:ns ## KEGG: BBPR_0383 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 225 20 244 244 440 99.0 1e-122 MILVVIAALLGVVIGLALPKISPSIGEITGEYIASGPAADALNGLQVDDRPDSTGYDRDS FGFRATDDDGDGCDVRDDVLARDLTDVIFSAAKRCQVSSGTLADPYTGKTILFVRGRNTS AAVQIDHVVALANAWQSGARDWTTAQRYRFGNDPYNLLAVDGPANQDKGSASAAYWLPTN GEYRCEYVARQIGVKRHYGLTVTTSEKRSMLAVLRACPAQQIPSQ >gi|197324945|gb|DS990229.1| GENE 323 340992 - 341138 62 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPTPGRYSIRLMVYTAFVTDRRISRHTTPPLGGLRHLSSDGLYSAPH >gi|197324945|gb|DS990229.1| GENE 324 341154 - 342458 1530 434 aa, chain + ## HITS:1 COG:Rv0924c KEGG:ns NR:ns ## COG: Rv0924c COG1914 # Protein_GI_number: 15608064 # Func_class: P Inorganic ion transport and metabolism # Function: Mn2+ and Fe2+ transporters of the NRAMP family # Organism: Mycobacterium tuberculosis H37Rv # 39 432 35 428 428 371 53.0 1e-102 MKEHRQMIDDKTDSEIDIERSHAEEASGRQHHEHALASILGPAFVAAVAYVDPGNVAANI TSGARYGYLLVWVLVLANAMSVLIQYQSAKLGIVTGKSLPELLGERMSNAGRFMFFMQAE IIAIATDLAEVIGGAIALNLLFGLPLFVGGLVIGAASTVMLWFQGGRTQTTFERIIIVML LVITFGFIAGLFVAPPDPAAVVRGLIPRFQGTDSVLMAASILGATVMPHAIYLHSTLVND HYYTHSDKPSIAMQLKGSKIDVTWALLLAGTVNLAMLVLAANSLHGMSGTDSIDGAQRAI TQVLGPVIGTIFSIGLLASSLSSTSVGTYAGSEIMRGLLHVNVPMWACRVVTLVPALIVL WFAKDPTQALVIGQVVLSIGIPFAVIPLMRYTHTKELMGEWVDGTVKHVIFMIVVALIVA LNVLLIVLTIFGRA >gi|197324945|gb|DS990229.1| GENE 325 342532 - 343065 132 177 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTKAFLSARRNDDRAHLATQTGPFASLSARTCHFGAHLETLSRSDGSGSFGAVMSGNWIP VTGDVPTQIGDYCHRPVTIVANLLRLPVRDRADSRDGPLRHVPRGSGTGSFDAEQHDEHL YEHDERADSQRPLRAEDARGDCVASMQLNQRLHQDDQHGGSDRTRDLPDRVGDRRPG >gi|197324945|gb|DS990229.1| GENE 326 342787 - 344454 1865 555 aa, chain - ## HITS:1 COG:lin2733 KEGG:ns NR:ns ## COG: lin2733 COG0477 # Protein_GI_number: 16801794 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Listeria innocua # 62 494 20 430 493 253 34.0 5e-67 MTNHSDNNDSSTETSTNGKNPKKTLAKRGGTAGGKRVSTLSTPLSSNESYVNGHLSRVAL ASLAILTFITFVGNFTQLQLSAALPTIVSEFGISVTTGQWLTSIFQLVMGVMVPLTAFLT RRFTTRQIVIVSMTVFAVGSLLAWVGPTFLVVLAGRLLEAVGTGVMWPVLQITVFSIYPL SRRGMAMGAVGMAMSVAPALGPTFGGFQTDSFGWRSIFFTLTMIGVFCLLLAIFGLRNFG TTDDHAKADFFSVAMSVLGFGGLMFGFTNIESYAPSNPMVWGAMLVGLCGIVWFVVRQVR RAKAYTVAVRQSVDESDTAQRTTPEPPLLDLGVLRNRSFTVGTICAALSFFAFSSIMVIM PLYIQNDRGYSATISGLVMMPGAFGMCISQFFGGKLLDRLGARPVALSGTLVLLFGTIMM SLIDSNTWIWWVSIWQFVRQIGMGFIIMPITTWSLNCLDPTEVSAGSAVTNTVRQIAGAI GAPVLVILMETLIQLHGGDAIAASIFGTQWTLRVSAFIVFIQVLIVLFGVKGAGAGSSRD VAQRAIARIRTVSHR >gi|197324945|gb|DS990229.1| GENE 327 344919 - 345212 81 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLGARFNALHSVTLPCFGQSRAVAGIVPLHITLMRFMLVHHPPPIHVRFPGFARPSVPY YGRFTGIFNVHAIIYGTVLTMSCADTPKVACHRLRRP >gi|197324945|gb|DS990229.1| GENE 328 345090 - 346661 1544 523 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0413 NR:ns ## KEGG: BBIF_0413 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 523 7 527 527 724 96.0 0 MNEHEAHERDMQWDDAGDGAGLPETGERDAVQGIEPGAERHAAEYKAVALGDAVAADAAG AATSVIGNVPVPTAAEGKTEPAVQEGAGAAGQQSADDEGMQFLDNPAWDIPDVMFPSMGG VKDASSGRGPSYGASSPHVPLPEPEDTMRPVHVSASDPLGLEDVSDIPAVPEEEEPQGNN DVTMVIQPLSAFPTPTQSVPPTAGMTPQAVPLPPEAGAAVPPHGSGEPGGKADGSSRKQH GHRRAIIIAVVAVVVVALAATGGFLWWRHVQNQNDLDQAASLCKTSKTKADKAFSELQSA LSEAKPAQQIPQGDVSDPTVLETLNSAVTKASSASEPVSCDVALGTETLNANASKNKQIA RASTKAKTNVAKATKAVNDGKAEKVEFIKHELQTAVTGAQKIYDDSKGVVLDDSTRTTLQ SAIDQANALLQQDDAALNEMQQSITDVKDAGDAVTVSMNEYTAQQKYLEQQRQQEQQRQQ QQQQQQQDDQNDNGNDLNGSTDSQIGDSRGHETQPTHPQGSDD >gi|197324945|gb|DS990229.1| GENE 329 347170 - 348165 1441 331 aa, chain - ## HITS:1 COG:BS_yabE_1 KEGG:ns NR:ns ## COG: BS_yabE_1 COG3583 # Protein_GI_number: 16077108 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus subtilis # 85 215 184 314 341 60 33.0 4e-09 MASHRKTNAPTLLSLSKRQWIRIVAIAAAIVMVVAAGIVSRNFYIGRGRGTTVNEYSATD LAGSSVSRSNNRADLRGADANTSYVTVKINGKSRFVLGDNFTDVKSVLDAGNITLEPEDS VTPALTTKVDESTVISISRADTQAETSETAIAFNTVKKETTSLPQGQQKVQTEGQEGVLQ TTSMVTRSAGKVVSSTVFAKYVKKAPVDKVILVGTGSTEEAAANTLGDTVPSGEKQKWAH DWLLANGYTEADFTAANFIINHESGWQTNATNPSSGAYGLPQALPGNKMASAGADWRTNY QTQFKWFVNYCNQRYGSITGAYAYWKANSNY >gi|197324945|gb|DS990229.1| GENE 330 348400 - 348762 616 120 aa, chain - ## HITS:1 COG:Cgl2917 KEGG:ns NR:ns ## COG: Cgl2917 COG0526 # Protein_GI_number: 19554167 # Func_class: O Posttranslational modification, protein turnover, chaperones; C Energy production and conversion # Function: Thiol-disulfide isomerase and thioredoxins # Organism: Corynebacterium glutamicum # 1 108 1 108 124 110 49.0 5e-25 MATVQLNAQDFEKTITDNNLVFVDFWATWCGPCRAFGPTFEAASEANPDIVFGKVDIDAN QDLASAAGIQAVPTLMIAKQGQIIFKQAGALRAEDLDDLIAQAKALDVSAAAQDSAASAE >gi|197324945|gb|DS990229.1| GENE 331 348960 - 349586 763 208 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0416 NR:ns ## KEGG: BBIF_0416 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 208 1 208 208 411 99.0 1e-114 MPVLNDEVPDEGDFDAGRRRGEFDDITPEDFIRGSGHGNPPGWLGPADISRARRQLPIAY VEIVPIRTDDLGRVSRIGSLLHVSDDGSIERTLITGRVLFHESIREAIARNVAKDLGDIA LPMLPQSLQPFTVAEFFPTPGLSEYYDPRQHAITLCYVVPIAGDCKPQDETLDVEWVDPR GGMMETFIRQMTNGHGRIVRQALAWLDL >gi|197324945|gb|DS990229.1| GENE 332 349732 - 350586 801 284 aa, chain + ## HITS:1 COG:aq_327 KEGG:ns NR:ns ## COG: aq_327 COG0596 # Protein_GI_number: 15605847 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Aquifex aeolicus # 17 278 10 250 256 80 26.0 5e-15 MMTLNNTVYATGEGTPLVLVHAFPVDHRMWDDCAEQIARQARETGDPAVTVWAPDMPGAG TGPIPEPADSGRVAADGALTDALDLMADAYVDLVRAAGYDKAVWAGLSMGGYVVLDIQRR HPDMVAGLALCDTKAGADGPEARANRLACASECEATQTVKSVMHFADATPSDSSFKQSDE GRALFARWIGEQTPQGVGWRQRMAAGRPDLSDQLPLVTAPAAVLCGDKDPFSPRPAMRAL ADAMTGTSPSFTVIEDCGHFSAVEHPDQVASALLDLVRRVHLRD >gi|197324945|gb|DS990229.1| GENE 333 350700 - 351791 1305 363 aa, chain + ## HITS:1 COG:SMc02903 KEGG:ns NR:ns ## COG: SMc02903 COG2816 # Protein_GI_number: 15963981 # Func_class: L Replication, recombination and repair # Function: NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding # Organism: Sinorhizobium meliloti # 177 358 133 319 326 140 42.0 3e-33 MFSPLALTQTLPFLPLAQGDIDYQVARRGDPDLFDTLFADPVTKVILVRGGLLAVPRGQG NAVNYASANMRLSTLPGAYAGSALAVHPEVVPIFLGSYGALRNEHVVALDITRMSAPGAA SAIPSPSLGADAAFDADGNAPGAVAPDRLDILEQAVERFDWVDLRGFAAHANAREAGQAT TAVTLSIWYAGQRFCPSCGAPVKAAMGGWSQRCTNAGDGNRLLFPRIEPAVITAIVDSQD RLLLQHNSAWRNPLLYSVSAGFVEAGENLEHAARREAKEETGIDLGEVRYLGSQPWPFPA SLMMAFKAQALSTDILVDGEETETARWVTRDEYTIELSEGRMEAPGKSTIARYMIEEWYG REL >gi|197324945|gb|DS990229.1| GENE 334 351869 - 353719 2746 616 aa, chain + ## HITS:1 COG:all4768 KEGG:ns NR:ns ## COG: all4768 COG1376 # Protein_GI_number: 17232260 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 495 604 61 167 171 105 44.0 2e-22 MANEYTGDDNQEDERTQAVFPLDDQMDIPPLNMPVLHDGSTFDAEPSGLAGLVQETQAKR QADAASAQTQESQETQAFDPLAELDDEAAPEPQPAAPATSSFAPQRPAADDVATVAFAAV AMNPADDAALGKGVSAAKTKNPKRGMIIAFSIIGALLVLLVAAFFGTNWYFQDRVAPGVR FGNVSVMGKTESELTGIVNQAVSDSAITVTDSEGNNVKAGLDKLGVTVNVKQTVRNLLDA KSGNMFTRINPFAKQDVRLSATTDNYKLSTYLTEQLVEEQDRAVASNISYDANSKKFIVT EGNEGKEADPSDVIAAVKKAVSQPGEAQKLSVMYSDVAMPITVETATSAANDANKRLTSS LVIGNSKGKTFTLPADEIAKWIQVKPDIQKGTITLAYDQDAIKTYLSQNLAKKLDQDMVV EKNITNTDGTVLTVTQKGVDGVAVQSTDETAAQVLDALNAGRGAELTATVKVTDHKTESR KVDYTSPNGDPHMVINLSEQKVYAYKGSTLVKTFIVSTGKPSTPTDNGTFFVHTKYQSQT MRGEGYVTPNVPWVTYYNQGEGFHGAPWNTAGIASGTPKSHGCTNMHVEDAKWVYDFLPI GAMVQIVGTTPTSAVR >gi|197324945|gb|DS990229.1| GENE 335 353867 - 354274 545 135 aa, chain + ## HITS:1 COG:ML2077 KEGG:ns NR:ns ## COG: ML2077 COG0509 # Protein_GI_number: 15828123 # Func_class: E Amino acid transport and metabolism # Function: Glycine cleavage system H protein (lipoate-binding) # Organism: Mycobacterium leprae # 14 130 3 126 132 95 42.0 3e-20 MSDENAIDNPLNLDIPDHLQYSEEHVWVDDSVSPAIVGITAYAEQQLGELVFIDLPDEGT RVEAGDEVLELESAKAVEPLVCPVAGTIRYVNHDAADDPSVVNNDPYGEGWLLKIELDDD EPELLDAESYAKIAQ >gi|197324945|gb|DS990229.1| GENE 336 354390 - 355751 1762 453 aa, chain + ## HITS:1 COG:Cgl2204 KEGG:ns NR:ns ## COG: Cgl2204 COG4850 # Protein_GI_number: 19553454 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 115 436 27 336 344 176 31.0 9e-44 MAEPMSIAHDNTPRRGGARPLGGRDDGLRHDGPIHDGSDPDNAAHDPSGQTGSPQDDMLT VPIPARPVVTTFDAASRHERIEVQPVLVRRMRRAVTGTFGLWVRLSTAVARKLDWFPRVD PYVGYGTEVYSRLICRTVYAPKHSNAGTLTRGIKGMLAIPASRVQVRISIDGTPLETVQI GESERYDEFNPVRDLGSEYAVSDESGYLDLVAEHQLETGVHRVTYRVKGRPEVSANLFTI PSSAKVGIISDVDDTVMVTQAPILWKAAYNLLFLNPKKRNSVPGMSVLFTKLQDMFPDAP FFYLSTSPWNVEGSIRHFISYHGFPEGPLLLRDLDPRPKTFVPSGPQHKLEFAEQLMADF PDMRFILIGDDGQKDPTTYATIARRYPGRVLAIGIRQLSPREATGLSSMMGMTSTQPMPV TDVPVFTGTTGSNIMKTMLPYLKQKLGRTDLAE >gi|197324945|gb|DS990229.1| GENE 337 355807 - 358269 2210 820 aa, chain + ## HITS:1 COG:Cgl2542 KEGG:ns NR:ns ## COG: Cgl2542 COG1770 # Protein_GI_number: 19553792 # Func_class: E Amino acid transport and metabolism # Function: Protease II # Organism: Corynebacterium glutamicum # 15 814 8 699 706 586 41.0 1e-167 MTDETNGGVAACRPPIARREPVKRVFHGDAVIDPYEWMRDKQSPEVRDYVAAQNAYCDAR MAGLAGLRGTLFDELKAHVQETDMSVPVRMDGYWYFARTREGSQYAVQCRVPVRGEDDWT PPEVGGAGDEGGSAVGAGSLPGEQVVFDANREAEGHDFFALGGLSVSKDGRWMLYGVDTR GDERYDFRIRDLDTGDELPERLEGIGAACFTPDARWVFYVTLDDAWRPCEVRRHRVGSPV EQDEVVFHEDDERFWVGVGMSFDEHSIVICSASKTSSEVWMLSTATPEGEFSVFIARKDD VEYDVSFACFEGAGADGADIPVAVVYHNAQDPNFEIDVIDMRTHQPPYTLGEGVRVAVGS PYGCARGDDMEAGAGAKPAGTAYSNPANPRILQGAHGLAIEGIAIHRHFVTLAYRTDGLP HVAAMTKTQAAEDFLAGRAWSFRELMPPALDGDWDVPGRADDGAAEAAGGTLPGATHRLY SIGTGGNPSYDAPRMRYTFSSYTRPGELHEYDPATGHDELLKRARVLGDFDPREYMERRV WVTARDGERIPVSLVWRRGHEPAAAGAMFITGYGAYEISSDPGFSVARLSLLDRGVLYAV PHVRGGGEMGRAWYEQGRRLNKRHTFEDFIDVTAALQDAGLADAHRTVAYGGSAGGLLMG AIANMAPQLYAGIEADVPFVDALTSILDPSLPLTVTEWDEWGDPLHDADVYRYMKSYSPY ENAPEGADGEAGSGAASTRSLQRQSSRPFPRIFATTSMNDTRVLYVEPLKWVSRLQAAGI DAIIKIEVEAGHGGTSGRYKQWREVSYENAWCLSIMGLTR >gi|197324945|gb|DS990229.1| GENE 338 358250 - 358528 163 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAQEPSFIPLSGTAKSECRNNHMIPTRGPQNHIPLQAGARSGGGWPRGPSDTEPPKCRTI PTATREPPASGGAIWKPRNQGRTSAAASGSGP >gi|197324945|gb|DS990229.1| GENE 339 358513 - 358665 89 50 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVPVPYHVKNTVFSRGVVQDLAAESVLIGYMPCCGTRGISKILAKWPISL >gi|197324945|gb|DS990229.1| GENE 340 358845 - 359876 1339 343 aa, chain + ## HITS:1 COG:Cgl1256 KEGG:ns NR:ns ## COG: Cgl1256 COG0473 # Protein_GI_number: 19552506 # Func_class: C Energy production and conversion; E Amino acid transport and metabolism # Function: Isocitrate/isopropylmalate dehydrogenase # Organism: Corynebacterium glutamicum # 7 343 3 338 340 412 65.0 1e-115 MAKKYTIAVIPGDGIGKEVTPWAQKALEKAAEGVADFEYENFDLGAERYLRDGAILPDEE LERIKKTDAILLGAVGDPRIKAGILERGLLLKLRFALDQYVNLRPSKLYKGVTSPLANPG DIDFVVVREGTEGLYCGAGGAVRRDTPAEVATEVSINTAYGVERVVRYAYELAMKRRKHI TLVHKKNVLVNAGDMWQRIVDRVGEEYPEVTHDYQHIDAATIFLVSDPSRFDVILTDNLF GDILTDEAGAVVGGVGYSASGCINASNEYPSMFEPIHGSAPDIAGQGKANPTAAILSAAM LLRHLGFDDAAARIDTAVEADIEELGSTVRSTDQVGEDILARL >gi|197324945|gb|DS990229.1| GENE 341 360642 - 361280 710 212 aa, chain + ## HITS:1 COG:Cgl1050 KEGG:ns NR:ns ## COG: Cgl1050 COG0095 # Protein_GI_number: 19552300 # Func_class: H Coenzyme transport and metabolism # Function: Lipoate-protein ligase A # Organism: Corynebacterium glutamicum # 10 199 128 311 352 190 51.0 2e-48 MDVDVQWSREVAAGERPATIRFWQWASPAVVVGRFQSIPDEVHEDVAAKEGFTVVRRCTG GGAMFIEPGNTITYSLYAPRWFAADLDIEESYRLCDMWLIAALRGLGLDVGFSGLNDIAS SHGKIGGAAQRRFPPIGSGPGSILHHVTLAYDIDAVKMTRVLNISGEKMSDKAVKSAVKR VDPMRAQTGLSRDGLIARLADCLTQPDGPGAN >gi|197324945|gb|DS990229.1| GENE 342 361444 - 362163 899 239 aa, chain + ## HITS:1 COG:Cgl0291 KEGG:ns NR:ns ## COG: Cgl0291 COG0664 # Protein_GI_number: 19551541 # Func_class: T Signal transduction mechanisms # Function: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases # Organism: Corynebacterium glutamicum # 21 238 13 227 227 177 46.0 2e-44 MRAIGPNSFPEEDNELLHTPLFKQVSPEQANELIPYLHEAVFDKGDYIFREGDRDHRMYL LERGRVKLIRESKDRRVQLLSIHAHGELLGEIPVFDPSGGPRTATAVAMTHGTHVAWLEH DALFAWLNEHPRVAIDMLQVLANRMRGNNERISDLVFMDVPARLAKTLLNLGARFGEPVE AGLKVPHDLTQEELAQLVGSSRETVNKALMDFANRRWIAREGRSIIIYQPGMLIRRSQR >gi|197324945|gb|DS990229.1| GENE 343 362329 - 364647 2825 772 aa, chain + ## HITS:1 COG:ML2308 KEGG:ns NR:ns ## COG: ML2308 COG0744 # Protein_GI_number: 15828240 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Mycobacterium leprae # 26 610 18 589 803 208 31.0 3e-53 MATMPKKKSLTAKRVLSLFLAYVLLCLAGGVVTSAFFLPAVFASNNVVRAIVPSLQVEGI DFNVTDLPQQSRLYASDGTTQIGTFYAQNRIVVPLKKISKPMRQAVVSREDRRFFRHAGV DIQGVMRAFVATYVKKGATQGGSSLTQQYVKNVLLLQAQEDNDPIAEYHASEETVARKLR EMLIAVQMEKTYSKLEILQGYLNIAQFGRGIYGVEMAARRYFSTTADKLDIVQAATIAAI TKNPAAFDPSVESNQKASQRERNIVLDLMYQEEYISQKQRDEAKAKPLKDTLKLQDAQAG CSASGDAAFFCDYVTKKILNSKEFGKTIEERKKLLYEGGLDIYTTMDVNANSAAMKAARA AIPADDASKMEVMMAAIKPGTGEVLGFGINKIYDTSPEANNDPARTAMNFAVDQIDGGGS GFPVGSTWKPINLVAWMRKGHSINEVLPAPGVVNLYRDIPGFRGVNTWDVKNSGGTPGYA ESPLDGLVNSHNTTQAAMAKVIGLEPIAQAAEDIGFHQASKQKMNMHLKDDTANGGAYQA PLIIGGTVSAAPLTMANVYATIAAKGVECTPIAIKKVTDATGAELDVPKANCHQAVDPDI AETVAYAMNQGVVRPNGQARTAQLANNRKTFAKTGTNENTYMLTGGFVPQIAAFVAVGNA DGNSDFDNKTINGVYHRTWFGSYIATPTWKNFMDTYLTAINAPNVDYGTPSSKYSATSNS TSKSSRSSTSTTDGTTSGTGGTGDTSGQYTQTQNDTTTGGNQTEGGQTTGGQ >gi|197324945|gb|DS990229.1| GENE 344 364935 - 366068 1412 377 aa, chain + ## HITS:1 COG:all0827 KEGG:ns NR:ns ## COG: all0827 COG1902 # Protein_GI_number: 17228322 # Func_class: C Energy production and conversion # Function: NADH:flavin oxidoreductases, Old Yellow Enzyme family # Organism: Nostoc sp. PCC 7120 # 17 357 3 341 355 322 50.0 6e-88 MNAEGKKKVKGGKGGVQLFQPMTLRGVTMRNRIWLPPMDTYSAVARDGKPTPFHYQHYVS RAMGGFGMIIAEATAVTADGRISPRDVGLWNDDQVAAWHWIVDGIKQAGAVAAVQLNHAG RKGSTGCFGVGFEGKSVPEDAGGWRTVAPSPIAYRGLTDPRALSVEEIHGLVSAFRDAAQ RAVRAGFEAIEIHAAHGYLISQFLDPLCNERADEYGGDIHGRMRFLLEVADAIREVIPDT VPLLVRISATDWAAGGWDLDQTVDTACVLKQHGVDLMDVSTGGIIADVSIPVKANYQVPF SDQVRERAAIPTTTVGLITKPKQAEKILRAGQADAVEIGRAALRDPYWPLRAAAKLGVPV SKAPYQPQYIRGAFPED >gi|197324945|gb|DS990229.1| GENE 345 366138 - 367424 1650 428 aa, chain - ## HITS:1 COG:slr1418 KEGG:ns NR:ns ## COG: slr1418 COG0167 # Protein_GI_number: 16332087 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Synechocystis # 106 427 46 374 381 182 33.0 1e-45 MRVAHITSIKTNKTSLLPHSPPPAGSDRTRATASLPFFRVRDTMEGMAYVSENFWHDAVN KATTDLFTFGYKNIIKPNFVFNHTPDVAHDQMIEFCNVTKRIPPLMWLLREMLDYTDPVL ETTVMGVDFANPFGLSAGLDKNCDMPVLMDNVGFGFETVGSTTSRASAGNPKPWFHRLPE YDSMMVHVGLANDGSDKVIDRAEQAWTNAKTMQVSVSIARTNDDKCGDLDEGIEDYCISM RRAAGRSAMVEVNVSCPNTHAGEPFTADPDALDRLFTELDKIERPQPTLVKMPLNKTWPE FKDLLDVLAEHNVQGLSIANLQKDRTGLEIPQQWEGGLSGGPCTVASEERIAQVYREYGE RFAIAGIGGVFTPQQAYRKIRNGASLVMFISALMYRGPQQITVLKRGLAALLKRDGFEHI SDAVGIDA >gi|197324945|gb|DS990229.1| GENE 346 367408 - 368292 841 294 aa, chain + ## HITS:1 COG:CAC0231 KEGG:ns NR:ns ## COG: CAC0231 COG1349 # Protein_GI_number: 15893523 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulators of sugar metabolism # Organism: Clostridium acetobutylicum # 28 284 1 254 254 124 29.0 1e-28 MCATRMSNITKRTYWFGLCANMCDNVHMISSQRQHLILSRLRTRGAVRITALSKELGVSA MTIRRDIADLSDKGLLKRVHGGAVSTSALLSEPLFSVKSQMDIGLKDAIAREAVQYVAPG DVIAIGGGTTAYVFAQHLLESQQASGITILTNSIPVAELVQALESKDVEVIVTGGVTTRS NSLVGPIADKVIASLRVNTVFLGTHSVSIPRGFLMPNSLEAATDMAMMGIADRTVILTDH TKWSCTSLSLFARFDQVDTVITDDGLDHESIAKTRDLVKELVLAHQSEHTEESE >gi|197324945|gb|DS990229.1| GENE 347 368297 - 369547 1955 416 aa, chain + ## HITS:1 COG:TM1191 KEGG:ns NR:ns ## COG: TM1191 COG1085 # Protein_GI_number: 15643947 # Func_class: C Energy production and conversion # Function: Galactose-1-phosphate uridylyltransferase # Organism: Thermotoga maritima # 75 408 3 313 318 158 29.0 2e-38 MAEITNYTPGEYAKEHIRITPTTLADGRDFFYLDDDPEYVSGAKTRELKDPRPLDYRFAP HLDADGNEVPYAAPQMRRDPLTGDWIPMATARMNRPITAGPGATAKGNPLAARKPGDPYQ DGEVPDTDYNVVVFENRFPSMVRVPGVSEDVTYVDGNPLWEKKLAAGRCEVICFDPNEDG LPADLPVSRLRTVVEAWAFRTAEISKMEGIEQIFPFENHGAEIGVSLAHPHGQVYCYPFI APKMEKELQHTEAYHEKTGGNLLKDIMNAELEAEERVVMRNHSWVAYVPAAARWPLEVHV APVRDVLTLDQLNDQERWDLASMYSHLLKRGNAFFDKGDGEGMDLPYIAAWHQAPIHDAR RENYRLNLQFFSFRRAANKIKYLAGSESGMAAWISDTTPELIAKRFHELGQIDISD >gi|197324945|gb|DS990229.1| GENE 348 369637 - 370887 1659 416 aa, chain + ## HITS:1 COG:FN2107 KEGG:ns NR:ns ## COG: FN2107 COG0153 # Protein_GI_number: 19705397 # Func_class: G Carbohydrate transport and metabolism # Function: Galactokinase # Organism: Fusobacterium nucleatum # 37 396 24 369 389 192 33.0 7e-49 MTAVEFIEPLSREDGVSRATKLFVDMYATAPEGVWAAPGRVNLIGEHTDYNAGLCLPIAL PHRTFIALKPREDTKVRVVSDVAPDKVAEADLDGLKARGVDGWSAYPTGVAWALREAGFS QVKGFDAAFVSCVPLGSGLSSSAAMTCSTALALDDVYGLGYGSSDAGRVTLINAAIKSEN DMAGASTGGLDQNASMRCTEGHALLLDCRPELTPLENVSQQAFDLDKYGLELLVVDTQAP HQLNDGQYAQRRATCEEAARILGVANLRVAADGISKADDQFQALKETLDALPDVTMKKRV RHVVTEIERVRSFVRAFAQGDIEAAGRLFNASHDSLAADYEVTVPELDVAVDVARKNGAY GARMTGGGFGGSIIALVDKGRSQEVAQKIADEFEARGFHAPRALPAVAAPSASREA >gi|197324945|gb|DS990229.1| GENE 349 371105 - 372430 2202 441 aa, chain - ## HITS:1 COG:Cgl1432 KEGG:ns NR:ns ## COG: Cgl1432 COG0477 # Protein_GI_number: 19552682 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Corynebacterium glutamicum # 15 438 24 458 462 315 44.0 9e-86 MSATATAAVSKAGAVKKDSVPEIIAASMVGTAIEFYDNYCYSIAAASYFGTIFFPAASKA NPALGTMYAFLTFAVSFLARPFGSMLFGHFGDKIGRKTTLVVALMTMGISTFVVGLLPGY EQLGALSIVILCICRACQGVGLAGEWSGAALVATENAPANKRALYGSFPNLGAPIGFFCA YGLNLLLDSTLGSTAMQAWGWRIPFLCSAVLVIIGLYVRLRMTETPIFRKAVEQDRVVKH PLRSLLPYWKEVLLGTFAMGITYSLFYVLGTWSLSYAVKVMKPPFSQNECLAMQMVSVVF FAIFIFVTCIYSDKLGRKTVLISTTLATLVFSLFAMQSLQHNVLTVMLFLCVGFALMGGL FGPCGAYLPELFPTHVRYSGAGLSYNLAAILGGAFAPAISTALVKSTGAVESVGWYLAVM SLLALIALFLIKESKDEDYEK >gi|197324945|gb|DS990229.1| GENE 350 372610 - 372768 89 52 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139643|ref|ZP_07801836.1| ## NR: gi|313139643|ref|ZP_07801836.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 52 1 52 52 93 100.0 5e-18 MKAMVILLTLWTIVRLRLDDPRVNNADVGFGRWPADTPKWTVRQYFTPAPYT >gi|197324945|gb|DS990229.1| GENE 351 372807 - 373079 507 90 aa, chain + ## HITS:1 COG:MJ1558 KEGG:ns NR:ns ## COG: MJ1558 COG3830 # Protein_GI_number: 15669753 # Func_class: T Signal transduction mechanisms # Function: ACT domain-containing protein # Organism: Methanococcus jannaschii # 1 90 1 90 90 80 43.0 7e-16 MNKAIITVVGQDTVGIIARVCTYLSDHKVNVLDISQTIIDGFFNMMMIVDYSGADNEFGV IVEDLDKLGEQIGVRIRCQREEIFTKMHRV >gi|197324945|gb|DS990229.1| GENE 352 373099 - 374463 2024 454 aa, chain + ## HITS:1 COG:CAC0479 KEGG:ns NR:ns ## COG: CAC0479 COG2848 # Protein_GI_number: 15893770 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 2 454 1 451 451 562 65.0 1e-160 MLNIMEVRETNQMIEQEKLDVRTITMGISLLDCAADSVDKVCDNIYDKITTYAKDLVATG EAIERDYGIPIVNKRITVTPISLVGASSCKSGDDFVKIAHALDRAAKKVGVDLIGGYSAL VSKSMTPAEELLIRSLPKALSETDIVCSSVNVGSTKTGIDMNAVELLGHIIKDIAARTAD NDSYGCVKFVAFCNVPDDNPFMAGGFHGVTEGDAVINVGVSGPGVVSRALDAAVGRDFEF LCETIKRTAFKITRVGQLVAQEASRRLGIPFGIIDLSLAPTPAVGDSVGEVLEKIGLEQV GAPGTTAALAMLNDQVKKGGIMASSYVGGLSGAFIPVSEDKNMIDAAASGCLTLEKLEAM TCVCSVGLDMIAIPGDTSAATISGMIADEAAIGMVNQKTTAVRVIPVAGKGVGEMANFGG LMGYAPIMPVNQTSCEAFVTRGGRIPAPIHSFKN >gi|197324945|gb|DS990229.1| GENE 353 374887 - 375576 579 229 aa, chain + ## HITS:1 COG:no KEGG:Corgl_1260 NR:ns ## KEGG: Corgl_1260 # Name: not_defined # Def: hypothetical protein # Organism: C.glomerans # Pathway: not_defined # 1 190 2 194 546 144 41.0 3e-33 MLAVGCAYLLIPAFGHAIWYDESYSVALTSHGWSGIWNLGSLDVHPIGYYMLLNLVRLVF GEHVVAYRLMSAAASCALVVAGYAMMRRDWGARAARLFAALACFAPPFMRMAFQIRMYSW AVLAVAMCFLFAMRICIKARGSGPVRVNEWIGFALFSLAGAYLHYYAVLVVTIINAIVLA VVCARAVDRADAVAGAQCVVGVLDSFRVPNDVDPADRLSADGRGCAEHL >gi|197324945|gb|DS990229.1| GENE 354 375589 - 376038 132 149 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0436 NR:ns ## KEGG: BBIF_0436 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 149 61 209 209 287 99.0 9e-77 MPADYIVKAVGGNVHRNAVIVSDSPRILGVLAASGRRDIPLRYALWTEDAWWDQRALPAY LDRVRVCHSWDMAVQSDTRQVVVIRSLPAGPAGEARPGNGEVKLGGFMRGLSGRKSLRKH RVFVRPYDQDVGRVGLRRASVDVVVTPPC >gi|197324945|gb|DS990229.1| GENE 355 376840 - 377487 939 215 aa, chain - ## HITS:1 COG:MT3475 KEGG:ns NR:ns ## COG: MT3475 COG0219 # Protein_GI_number: 15842962 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase (SpoU class) # Organism: Mycobacterium tuberculosis CDC1551 # 63 214 4 153 154 168 53.0 7e-42 MSETKGAEEAEAKVEKMFEYGYRKSNYGPDELVTDAHGNPISVVDAMLSAEKAAATETVT PHLCYYSPRIPGNTGSAIRLCAVTGTILHLVEPLGFNLRDTKLRRAGLDYHDMAHVVLHP NFDNLVESMPNSRIIAFTAHATKLYTEVEYKPTDILLFGPEPGDIPDPMDIMAGPHVAEQ VRLPMRPSLRSLNLTNCASIAIYEAWRQLGFKGGA >gi|197324945|gb|DS990229.1| GENE 356 377572 - 377898 248 108 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0438 NR:ns ## KEGG: BBIF_0438 # Name: not_defined # Def: hypothetical protein with coagulation factor 5/8 type domain # Organism: B.bifidum # Pathway: not_defined # 1 98 1 98 276 163 94.0 3e-39 MRQLFRRITTISATCALAVSVAAAVAVAAEPTTGNILTGKLPTTNSTHLIGDGDTGFGPT DSNITKIIAGEENGSAENNGYASWDDVYLQYDFGEPRDTLHQPVPQWV >gi|197324945|gb|DS990229.1| GENE 357 377843 - 378400 711 185 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0438 NR:ns ## KEGG: BBIF_0438 # Name: not_defined # Def: hypothetical protein with coagulation factor 5/8 type domain # Organism: B.bifidum # Pathway: not_defined # 6 185 97 276 276 347 97.0 1e-94 MISASREIHSINLYRNGYENALNTFKRIKVEVSSNEDFSDANVLFGTADVEETAATKLAA QTINLTTPVTARYVRIWQKGHCIQNTNSSWKGYGNGVGLREIEVIAKLKDGETLPDAQET RNIALGKLPYVYGLDPTNIAAISDGKQDDNYAVHNSTGERWLQFEYKNRYRIHEGSSRAP IRWSA >gi|197324945|gb|DS990229.1| GENE 358 378445 - 378783 417 112 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0439 NR:ns ## KEGG: BBIF_0439 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 109 1 109 154 208 93.0 6e-53 MHSRPMFPILETQVGGGWVGDVDYTKQATKQDSNFLVDWVRVYQSEGQPVTRFDDLDGAE SGAYRIAPASRTEGLTAVSNGDAAWRNKNNFYYGGQPRYEISRSHAVPMPCP >gi|197324945|gb|DS990229.1| GENE 359 378952 - 379968 773 338 aa, chain + ## HITS:1 COG:Cgl2617 KEGG:ns NR:ns ## COG: Cgl2617 COG1194 # Protein_GI_number: 19553867 # Func_class: L Replication, recombination and repair # Function: A/G-specific DNA glycosylase # Organism: Corynebacterium glutamicum # 25 338 10 293 293 229 42.0 5e-60 MPEIRNDTPAEPVGECAVPRVRALLSAWWEANARDLPWRFGRATPWGVLVSEVMSQQTQM SRVVPYWTDWMRVWPDVTALAGASTAEVITAWGRLGYPRRALRLQECARVVFEQYHGRLP QTYDELTALPGIGDYTASAVLSFAFGVRIAVVDTNIRRVLSRVFLGVESRGGAASPAERA LAGRVLPQDDETDVRDAIEAANARETVNAPESAIREVPQRSTRPSVIWNQSVMELGALVC TAKNPLCDQCPIGEHCAFLAAGRPGLGERRTRPRQRFQGTDRQVRGIILDALRAEPILAR ERLESLWPDHVQLDKCIASLDDDGLVDMLPDGSLRLPQ >gi|197324945|gb|DS990229.1| GENE 360 380063 - 380719 611 218 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0417 NR:ns ## KEGG: BBPR_0417 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 218 1 218 218 352 100.0 5e-96 MPTQPTRQPRPGSRQKPRKRVVSPQRRAMYRRRRAVALVIVLAAVSLVVFCVYSLGRGVA DGVSLLRPTPIARESVPAPKKTSGVNDCGASDVKLSLTAASQGVPVGGSLDFTASISYEG TSSCLLDLSDVVLTVSSGDQTIYSSDSCPADPNRQLLAKTSDMNRTSQKMTWGTSRTGDQ CVEDQSKLPKVGRGTYTAQLSLKNAHKAVSDPVTIQVQ >gi|197324945|gb|DS990229.1| GENE 361 380723 - 380950 110 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFPETPQMATICRIAGVSSLSTCPLYDMHLRKFQILAQISRRRNIHHMRDTPHAAAGRGN RRARGERPAQGRHRT >gi|197324945|gb|DS990229.1| GENE 362 380868 - 384551 842 1227 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796927|ref|ZP_02190884.1| 30S ribosomal protein S12 [alpha proteobacterium BAL199] # 697 1184 857 1390 1392 328 40 3e-88 MSYSGHVDKDETPAIRHMVAICGVSGNISITTLASDKERPLADTQATTNTTTIIARADQH DIDLHKASDRVNFGSIREPIPVPYLLGVQTDSFDWLIGNERWKKRVEEDEANGTDTVPHM SGLDEVFNEISPIENFAQTMSLTFSEPYFEEPRHTVQECKEKDYTYSAPLYVNAEFENGD TGEIKSQTVFMGDFPLQTPHGTFIIGGTERVIVSQLVRSPGVYFDRSRDRATGKEIFGAK IIPSRGAWLEFEIDKRDVLGVRVDRKRKQSAIVFLMAIGMTKPEIRDAFEGYSLVLDALE KETIETQDEALTDLYRKIRPSDTATPEAGRNLLDSFYFNTKRYDLARVGRYKIDRKLGLE HEINDRSLSRDDIIATLKYLVTLHDGGKTFPGKRNGEDVDLHVDVDDIDHFGNRRIRQVG ELIQNQLRTGLSRMERVVRERMTTQDAEAITPQSLINIRPVNATIKEFFGTSQLSQFMDQ NNPLAGVTNKRRLSALGPGGLSRDRASMEVRDVHASHFGRMCPIESPEGPNIGLIGSLAT FGRVNPFGFIETPYRKVVDGQITDEVVHMTADQEVGHVIAQVNQEIDENGRFVNSQALAR KDEEEAVDVPVSEVDLMDVSPRQMVSIGSSLIPFLEHDEGHRALMGTNMQRQAVPLIESE RPLVGTGSEWRVAYDSGDVIIADKPGVVTYVSADIIRVMNDDGTTSSYKLSKFQRSNQTT CYNQRPIIKDGERVEAGTVLADGPAIQKGDLALGKNLLIAFMPWNGYNYEDAVIISQRLV QDDTLSSIHIEEYEIDARETKLGAEEITRDLPNVGEDAVANLDERGIIRIGAEVEAGDIL VGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLRVPHGETGTVIAVKEITREDAEEDG DELPNGVNQMIRVYIAQHRKITVGDKLSGRHGNKGCISRILPEEDMPFLADGTPVDIMLN PLGVPSRMNLGQVLELHLGWIAHSGWDISLDPDLEAEWKKYVPKGAEKGAPNTPVATPVF DGVRPDVIKGLLKSTLPNRDGDQMVGEDGKARLFDGRTGEPFPKPISVGYMYMLKLHHLV DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLHEMMTTKSDDVD GRVRVYGAIVKGENLPPAGIPESFKVLLKEMQSLSLNVEVLNAEGVAIDMKDEDDDPSSS ADLGFNIGARPDAAAKEDQKAPEPEYQ >gi|197324945|gb|DS990229.1| GENE 363 384664 - 388695 5709 1343 aa, chain + ## HITS:1 COG:ML1890 KEGG:ns NR:ns ## COG: ML1890 COG0086 # Protein_GI_number: 15828009 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, beta' subunit/160 kD subunit # Organism: Mycobacterium leprae # 1 1280 1 1283 1316 1553 60.0 0 MLDVNAFDKLRIGLATADDIRNWSHGEVKKPETINYRTLKPEKDGLFGEQIFGPTRDWEC ACGKYKRVRFKGIICERCGVEVTKSRVRRERMGHIELAAPVTHIWFFKGVPSRLGYLLDI APKDLEKVIYFAAYMVTSVDEEQRHNDLPDLQDEFDTEIGNMAKRRDNEIENRARKVEED LAQLEAEGEGRGPARTKLRNGAERDMAAIRQCYDDQIQRLNAVFDRFKSLKPGDLEGDVD LWREMQDRYGDYFEGCMGAEAIQKRLQDFDLEAASKQLREEIDSGSGQRKARALKRLKVV NAFLTTGNKPEAMVLTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIE LNAPEIMLNNEKRMLQEAVDSLFDNGRRGRPVTGASNRPLKSLSDMLKGKQGRFRQNLLG KRVDYSGRSVIVVGPSLRMHQCGLPKPMALELFKPFVIKRLVDMNFAQNMKSAKRLVDRG DSEVWGVLEEVISEHPVLLNRAPTLHRLGIQAFEPILVEGKAIHLPPLACAAFNADFDGD QMAVHLPLSAEAQAEARSLMLASDNILKPADGHVVSMPSQDMILGLYYLTTVMDGAKGQG RVFSSYAEAQMALDLHEIDMQAEVLIRLPKDFVLPTGWEPREITVVDPEPGSPDVVKEER FHDGSVLFATSMGRILFNETLPVDYPFVNEQAKKKKLAKIVDDISTRYSTAQVAASLDAL KDLGFTRAPWSGVTFAFSDVVEPPERNELVAQSEEEVAKINEQYDLGFYTEEDRRQAIID VWTKCGEEVSKAIEKNFDPKNNLSIIVESGARGNMTQINQISGVRGLVNNPKGEIIPRPV ESNYRRGLSVLEYFISEHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTKRG LTMRVADRDENGNLTLVKAADGGPYSRLLAADVIDPADGTTVLYKRDDALSMDVLNDLVA HGVEEVQARSVLTCESKRGVCAKCYGWSLATNTLVDVGEAVGIVAAQSIGEPGTQLTLRS FHSGGVAAASDITQGLPRVTELFEARTPKGEAPIAEFAGVVKVENTDHGRQITLTPDDTS VEPIVYTDTRRAPMLVKNGDHVAAGDQLVEGSVDPKKILRILGPRAAQVNIVNEVHTVYR SQGVDIHDKHIEVIVHQMLRRVTVIDSGDTPLLPGELVDQARFKAANKETIKNGGKPAAA RPELMGITKASLATDSWLSAASFQETTRVLTEAALSQKVDDLKGLKENVIIGKLIPAGTG LARYQNAVVEPDKAIRDTIYPNFGLGADMDGSQTDFSDADLSDVDFSNIDFGDLKLGDDF NPDDFIDDQGGNDFGADSGNDLV >gi|197324945|gb|DS990229.1| GENE 364 388951 - 389496 867 181 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0420 NR:ns ## KEGG: BBPR_0420 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 181 1 181 181 320 100.0 2e-86 MATIPYPPAPELGWYADDPVDKPAAVSSAAAEPSPVSSSTASHAAKGSSDGDIEDWDSTV LSSSFTAKAPRKIYILHNDATGQTIVIDKSTLLGRKPSMDVPEGAKAEKVEDPTRTTSRN HAAISIDQNGTLWIEDYGSLNGTYIIRDGQEAQVLKGKPRELDAPATLRIGDQFFQLTER Q >gi|197324945|gb|DS990229.1| GENE 365 389511 - 390119 779 202 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0445 NR:ns ## KEGG: BBIF_0445 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 202 1 202 202 246 99.0 5e-64 MVDYDKAVATVQDPNADPVLLAKIAYENPEFGANVAVNPRCYPGLKRWLATFGDERARQT LAQMGVTAEDGPVADAQPAQDVAADSAADSAAADQYSADSYSADQYSADSYAASAAQQQP AQDQYAAAQYAAQQEPQATNPYGYTAQMALETTDQELIAKIAQYAPELRPCIARNPSTYP ALVDWLAQLNDPAVNAALATRQ >gi|197324945|gb|DS990229.1| GENE 366 390141 - 391034 974 297 aa, chain - ## HITS:1 COG:mlr2361 KEGG:ns NR:ns ## COG: mlr2361 COG0631 # Protein_GI_number: 13472160 # Func_class: T Signal transduction mechanisms # Function: Serine/threonine protein phosphatase # Organism: Mesorhizobium loti # 12 262 35 266 280 88 29.0 2e-17 MNDMQIHVAADSNIGLRRRANQDSFIIDDGVFLVCDGMGGGVGGQRASSAAVNRFETLAS RFSRSRTTIGHTIDLAQADVLAIGQELGGVSGTTVTGLIAPGRIERDAPGDVALEINPDM DWYVINIGDSRTYHMDADSDGQWDASTLCRITRDHSRRQEAIDSGEMLPEDAAIIPRNII TQCIGDPDGINPDFFAVRPTGRFIICSDGLHGEVDDAAIAATAAACADPQTAVDELIRIA LEAGGTDNVTVIVLDITGEYAGQKVWHASRLAQQEDLETVSDETLDTIRIQKPANQI >gi|197324945|gb|DS990229.1| GENE 367 391031 - 393727 2915 898 aa, chain - ## HITS:1 COG:lin0469 KEGG:ns NR:ns ## COG: lin0469 COG1305 # Protein_GI_number: 16799545 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Listeria innocua # 490 686 399 589 721 80 28.0 1e-14 MNDVIDSSLGSDSATSAVDALPGQVGQTRRPFSGLGSTVTGTGATTGSWAESTHSVIWLT RGGNRLPLARVGRRSWGTNLISVAVIALTSLIAASNLLDVYGSAAMWAVAAVPATLLGAL IAYAGTAPALRLWWQIVFLIVAQGVIGPVIALNDTAISHVIPSVETLSQGFVSTFGAFKY LIAVPPPTGSGDGSLMAAWTICLWLSFLAGVFAIGDKRQLSVLSLLPIAIELVVCALLGT QTGFQPIASGVLIGLIMIVWLSWRWQLLELGRWISATIILLLAAGLGVGACMGIGQSRLI LRDYYDPPLSPYDYASPLSGLRSYVKDHKDDTLLTVTNLPEGTPVRLAVMDQFDGNVWNL SDSTEASDSSDYRRVGTRIPNTVDGKKFTATFTIDKGLSDKWLPLAGAASSVDVTSAGKT GGANGNGGGESRSSADHTLFYYNESTQSAIIPAGLSTGMTYTESGIIAPTPTDKEIAKAN AAVTNQPGTKDVPDSVGKFASSVAGGEDTAGAQAQALVAQLKDSGWFSHGLTGDYPSLPG HGSYRINALLAGSAMVGDSEQYASAMALMARELGLPSRVVMGFLPKNDDGDISNDRTETV NGTSTVKFTGNDIEAWVEINLEGYGWVAFYPTPKETKIPDDNQNLTPPNPQTLVRQPPVP LTDPLRDEEQAHGKSALAGEDATDEPAASIWSTIGRIAAKVAIYGSPVWIPLLICLLILA LKTVALARLRRHGDARQRITSGWQAVHALAGQSGIPVTGTRRDQAQAIARQLNIDGAPLI ALGRQADYAAFSGQPVTPEQAGAYWRSVLTTRKLMLASQSFMRRLRTRLSLRGVFHNVRI LSSIRTWRHGDKRKPDGRQPAKQRPVKRKSSTQQPAGQKPATQQPSAQQPSSQKGRQS >gi|197324945|gb|DS990229.1| GENE 368 393724 - 395043 1403 439 aa, chain - ## HITS:1 COG:PH0774 KEGG:ns NR:ns ## COG: PH0774 COG1721 # Protein_GI_number: 14590643 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) # Organism: Pyrococcus horikoshii # 72 322 11 259 410 65 22.0 2e-10 MRRHNDSSSFEARPQKPRKPRKPKPRNERGQQASGKSARHRRRLSSARLRRRCKRAVRRF FTSFISPLGWTVVVIGIVCAAGFPLVRWHELLAIAAVALMMILCAIVLSLGNTGFKASIA VSRRRVTVGDDVHVTVDIDNPGRTPTTTARGDLPLGEAHERFGIPMLAPGQFKQTDIEFT TVSRAVLTVGPLNIRKGDPFGLVRHEKALAERITVYIHPNIARLNTLNAGVARDLEGQPS GQIVDDDLDFYGLREYEPGDDVRNVHWLSSAKTGTLMIRQYEATRRTDTSMTLDVNPQDY VSQEEFEMAVSVHASLGVQCLKQDRPLQTHAGSAHDTPKFPMGFLDDCSAITPRTDDNPN LVESTLRHSPDSSFYFFTVGSLKQLDHIKRMVLALPKSATCLVLQTSPGDVRAIKHFTDF TLATVGSLDDLPLIMEVLA >gi|197324945|gb|DS990229.1| GENE 369 395054 - 396760 1737 568 aa, chain - ## HITS:1 COG:PAB0848 KEGG:ns NR:ns ## COG: PAB0848 COG0714 # Protein_GI_number: 14521486 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pyrococcus abyssi # 265 566 10 313 314 298 49.0 2e-80 MSESNELDDATQLSDRTVLSDKTVLSSGNTAQSAEATTNAAAPSTVKNSAGENAAEKNDT AEGNAEKSTVARSISSASGDGTEVSDETVLSDGTVISETPHARGGAAVGEADKSKGAPTV AIPTLPKRRGGAAAGKAIRGKKSAQAKPSQAKSVQNKSAQSPVQNKTNGEAVSPVSDTGD NTTNNGPAKTGVDLDATQLSSIQHPTTAPAAKIPNVAFPKARTANTPVAAAARPVTANPA VANTNPQTPASADDIAYFKQAFDALLANVSTVVVGKAHPIRLCLTALLVGGHVLLEDNPG TGKTQLARGIASSISASFKRIQFTPDLLPSDVVGITFYDQKHGEFEFREGPVFASIVLAD EINRASPKTQSALLEVMEEQKVTVDGVTHDVPQPFIVIATQNPIEQLGTYKLPEAQMDRF LIKTSVGYPGHQVSVDLLRQVNIRDRAQTVSPVLAGDDILALRGIGERIHIDDNILEYIV RIVEATRHDENIAIGSSMRGALALTRCARIWAASDGRGYVVPDDVKDLAVAVLSHRIKLT AEATFAGLTTDEAISRMLETVPAPSLGA >gi|197324945|gb|DS990229.1| GENE 370 396825 - 402803 7453 1992 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0426 NR:ns ## KEGG: BBPR_0426 # Name: not_defined # Def: fibronectin type III domain-containing protein (EC:2.7.11.18) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 1992 1 1992 1992 3416 99.0 0 MSKQPNQRQRERAFRSSMRRLVSPDAHRWAMPVIALVMLIGIIAGAIWVSSITRQHVHLD DGTVWVTSLKNRKAARFNVKLKEPDSAVASSAARFDIVQHDSDTVLTEGAKATGISSATL GTTGRTETKGDTTAVTGGGTIAFLNTKNGNVWVGRSSDLNSVNPATSDPSMRLGTGGKIA VTHDGTVYGYRPSDGTVLTMQDPTGKAVQGGSLTEGKTVSADDFTVVDGTAVVTSEGRLY WHKGSADTGANSPLTLQYPDTDGRQESWVAAAGKNGLYLVELGKGEKKVNTLTSGGAGDA AKPVSTDGCVSAAWAQSANNYVRVCSPNVSNPEFGSLQSVSATSDLVFRTNHRLTVLNDV VDGNVWNPSDSTKVIKIQWNTIQTEQTAQQKQNDQSANNQRNFNKTCSAQSGQIKAQDDE IGARAGGQQILDVLRNDEQTDCSVLQITKVGAPAGGDMTVSPVYDGRYLQLDASAASAGT VTFTYDISDGRGQTSTAKVTVTLTGSSANHAPKQADTPPEYDVEQGATYTTNALGSFQDP DGDPMTLVSAVPQNSDQVVVSTRADGQLVFNTGSATSGRVGVQVTVSDGQNTGTGLVYFS IRPANTLPATIDAVVKQTTPNTETTVNLKPYVHGTSAQPAQLSTVEPPAKTSATMNAADL SFTFKATATGTYYVPYTVTQGSIPSTGLARLEVQPAAGKSAKPVAANDVALLGSNNTAIV EPLANDVDPMGGVLSVTSVDADPSLGIKTGLVSHKRVYLTARQVPTKPVEITYTVANAAG SSTGTIVLQPPALTAGNSAPKASNVNTQVRTDGIVSVNVLDHVSHSDGTTVTLQQKLQYD KDTFKGLVFVSGDTVRYQASKQTGVFPVTYTVKDNLGNSASGTITITVHQKDAKNKAAPT PQDVEAQVAAGQKVRIPITLTGIDVDGDDDQLLGLGNKAPQLGRITEVGANYMIYEAYED SSGTDTFSYAVEDWTGQRAQAQVRVGVFQGASDSGVYARDDEITLRPHTAATVPVTLNDI SGDNTDLTVSKKLESQGISGASVKDNMISFTTPDQAGTFYIMHTVADKAGLSDTATLTVN VDPNATIEPPTAYDYRVPSAATIDKRTVEVDVSQWIANPSGTANELKVGVDPSATDHAKV KGGEKSTVISVDLTDEARSVPYTVTNTTYGITSTAFIQVPAYGVFPPTLRPKAPPLKVNS RETITINIADYVRVGAGKTAYVQSPESVSATKSDGGDLYVNDTTLKFTAPKDYGGPASIT FTAADGKGNDKTQIINSAVLTLPITVIGREVPPPTFSSSTIDVVAGEDAKIIDLTALTHS PAGTYEDEKQYTYSGGSESGGITARVSASGQLTVSAPKDATVGSLASIPVTIIYSGGTVK AGMTARVVQSNRPLARIGAKTVKLKAGSTERVDLFSDAYNPFPDSSLTAVSCKSDDSAKL TVNCSSNGNISITAGTDIGASSNTVLVTVQDGTRSRDRQVTATITVSVVDKPGAPLLSPV SGQPADGSVNLSWTAGAANGSPITDYEVDWDGGSKSCGAVTTCQITGLTNGKEYSFTVKA KNEVGWSKPSTSVKAMPDKVPDPPKKVTTEAGYQRVTVKWDVPDYVGTKPDSYTVTLTGS GGGSVTKETSGNSLVFPIDNSATGDGTSYTATVKGKNRAGEGQPSAASNAATPWGDPDAP TVSLSVIKGNTLKATLTLGNMHNAGCSSVELSGAISMSSPCGTHTFTDTISRDQWYEELS VKATVNPQQSGAKPASADSNKVTPQYKIQPPKNLQVTLKGNECSVSVGGNGEHDGLSIFA NGQEYRGNGDSAAATYRINPWETCGTVSATQSFKGHSSEAIIFDGKGLVYKTPAKIEPPT LAWSTTDRNRITVSGGSVNLYGQSATVLVAFSTTSGKPTGGSDWNVTWSTASKQGYIDIS SFRIDTEKLYWYISVTGADSALNTADDIREVQGMRKPAEGSGTVTDGVDPSRIRRRSFDS MPSISTLASNRP >gi|197324945|gb|DS990229.1| GENE 371 402882 - 404300 1420 472 aa, chain - ## HITS:1 COG:Rv3080c_1 KEGG:ns NR:ns ## COG: Rv3080c_1 COG0515 # Protein_GI_number: 15610217 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium tuberculosis H37Rv # 1 301 14 310 340 155 36.0 2e-37 MPAQPTPPRISGYDFIQPLGTGATASVYRYHQRVPSRDVAIKVSSATLDPRAAARFRNEA NYMAELSAHPYILSIHDAGVTSTGLGYIVLEYAPGGSYKELIRKRPLTADQMLDLGIKLC SALFTAHCKGILHRDIKPANILITPQGLPVLADFGISTNVYQAGTQTGFSVPWAAPEVLT GRSGGTEAADIYSLAATLYATLTGRSPYEHGYQAHTQQELAQVIVSRRLPPIGRPDVPAD VERVLVRGLDKNPDNRYGTALEFARAMQQVQQAYYGHATPVTVEGVPEYPSSMTGRRRVA PGPANVTRMDAPTGAWKKPLSITAVVVAALTAVVLTFVFVVMPHMDDTATRNRTSVSTPG ATGDSNGTDGNPDDITGAEVVPTPENLNGTYDGTTVTFTWTNPQPKDGDMYAWSPVQGNS ATSGPSTSTNIVADRKVELHDVTDKQTCIEVKIVRSDKQMSQDPAIACAVRQ >gi|197324945|gb|DS990229.1| GENE 372 404542 - 408825 2753 1427 aa, chain + ## HITS:1 COG:Cgl0751_1 KEGG:ns NR:ns ## COG: Cgl0751_1 COG0210 # Protein_GI_number: 19552001 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 731 985 491 740 756 65 25.0 9e-10 MKAVEALLEGESGKALLVVGAPCVGKSTLARDALMAGLRRFGESGAMMTVSGRQIADVIG DQVIRELGATSQARPVTTLSAIAFRLITVMRSRSGEPLPRLLNGAEQDALLRSVCSVHVA HVRAGDPCGTCSLLREYFARDDWDGVLADAVAGNDGEGGDADSGVGVNAAFVMQLRDMLA RMDELGVSEDREGTALSALRHWSPRVERLHVQWRLAFALRREYETAVSRMYPGEYRLDSS RLLVEGAKAVGMVGDDDLPCLLVVDDCQDLTFAGFTFLKALRDAGTRLLLVGNPDEAVQT FRGSYPEYLFDQIRRQLGADMVRLPAGGAGNGRVEERAVDHVDGYTYRDLVASRISLSIR STQDETVPLPQRPGKLPQLPASLPIVALPQADPLPGDGSLKTALYRSADEETEDVVWRIK QAHILEGRNWNDMAVIAHDNATVRTIGERLRHDGVPVRYSSVTRPLKDEPFVQGLFALLE LAMLRNQTVPALGMNLQQTALYVRSRVAAVMGCPLVSVGGGRDHEGYPARLEPVDAAMNA LASLGKIVTCEDICEGDASDDVPGGAADDAGKTGDAGIAGDAARMHALGRLMHGWEQWRE WAVSGRDRKTITDDTIIDVKAPQGDELQFGVDAMYLLLEFADDAHAMHGGVAGLGGTGDV VDDAGSAVGAGTKGASGITADDVLAAVQEVCGRGDPHSRVFAHLWNLVGTVAQGLRQLPA KEPQYALSVAWNACDVASRWQREALNNTDAGRAANDRLDTAMRLFDYASGSAASRDLPEF FAQVRAMRIEADSLAKVAPIDEAVTLTTPAGSSGRHWPLVWIPAIQQGIWPNLAARNTMF GGEDLADVMLYGGLSDDSGEHGDNKLESVLYAEQKSLLVALTRASEQVTASAVYNDDLTP SDFLYGYIPERFNRERHASAEGREYTQVGEAGRLQGLDADPRGLVAAARVALAVHPRGSR ESQDAVDALRLLANNGVEAADITRWPFLDEVEDASSGSRTVGSRAAAPEPDKAAEGTGQS SVPRIATLSPSAVDSIWGCPVCWMMENRFTGPRAGSVATSFGSLIHAVAETASNEGLDAA DWRDDLPIPERVSTVRDRMIAIYEELRDDPTANTNPADQYNATRKDNTAHDVLGHIASYF VMSNTDEYPVNNVKNFQIGTLESAQCERSFIAVFSLDDILAAYNAMDGVDPIGRDELAAI MGSLVGGWPEAMNDRLTVRLSGRIDRMETRIMPDGKRHVRLIDYKTGKVPSTKAIFNDLQ LVCYQLGLAFPENGPRGAEALQVMPDIAQSGLFHVAQKDAPATSGTSNAQEGMYQPALFA DGSLNTSSFMPRNRYKTLDKLSDAPDLIEEPPTGVSAAAWRQFLGMRGTQAVWSLSMIAR VFYAAAASRSTHIQARPKPDHLQYCRMKAACPACAGEINTVFETRQS >gi|197324945|gb|DS990229.1| GENE 373 408822 - 413027 3326 1401 aa, chain + ## HITS:1 COG:Cgl0752_1 KEGG:ns NR:ns ## COG: Cgl0752_1 COG0210 # Protein_GI_number: 19552002 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 11 576 22 517 812 183 30.0 2e-45 MNAPRFTDSPEQAKVVNAPTGDDVLVVAGAGSGKTYTMTRRIINLIAQGVPAERILGLTF TRKAASELLSRVSAAVLADGGDERFANRAFLKPEVSTYDAFFQTIVRQYGLLVGFDQNTQ PLSQAGAIQLATTVVGRHMDILFEQDLGAFKTVVNGVLGLSHAIGNAMIGGSTTTMDEAI GRVRAWDQAFLAQLDIAIGDTPVPDEAPKAKVPTKNKKDTEETFAAKQEEYRAQLRDICV YKCAQLRDVTRRRETLLTLVEEYEQEKRVQNMAEFSDFTIAAYQLVARFPSIGERYRRRY THVLLDEYQDTSTTQAMLLATLFHPQSADADADRSSSRWREAARSAGGWSKDGVGLSRSA VNAVGDPFQSIYAWRGASPGAFRMFQKDFGMPSDAKPYPLSVTRRNTCIVLRAANNLTEP LRIPPRRAGSSLMREVDVANLSAMDNAAEGTIGVLGFATFGQEADAVARFAKQAIARYRK DDAATAASDTPHVAVLFRGKTHMAQFAQELERAGLTTLVVGYSALLERPEVQDLIALLHA TADHTDSASLMRLLATPRFGLGSESLTRLAGMAEDLDSQCRYRALVESGIIGSGSDGARA DDGHDEAIVSTSIDSGLVSEADGGSDIATFADSQVKAIVKQYRDRVPHAVFLIDMMMRDD LPSLLSRRGGFDETTSRRIIQAGEVLQRVHAVTNHPLKEVIDAAVRALNLDIDTIVAQAV KNPSQPVNPTQARSPLQSVAALVDTYTQEIVEGVNPTLRGFMSWVDSLGQIEEDTAAVPD TPADVVLMTIHQAKGLEWDAVAVVSMQSGVFPSNQGGLHVELDAEHPGGGAGESWTPPEY KATVRSWADDPAAVPAPVRVDAGILPRFPHDANPDDAPVETLRALDDVEVIDDEFYGDLR SKDIGDDMDVADPSSWYLTQEEEYGRRLLADERRLAYVALTRAKKDALLTYSQYSILDRD PSQYLNRPGKRPSASKPSVFWTEMQDSLCHESGLVSACKSGSAGYSENADAIADSSPDLA VAGAASGASAHPSLDQLGVDRPQGFFVGDHATEYERDVVEEAWNAPLEEREQGGGPTWPA KLSEETLSKLTGGMSGDSVLVTDDPDSLLARARMLVEDPDLMPWSFGRGEREIDRYVRRQ AEHLLEHGRQNVTALQARAGHMTQREERGYWRGLIRPIPRVASPAAEAGTLFHAWAEQFI NAYGDGQSIDADGIGAYDSSSIETGTAGTCREPVTRESLLHDLSELEMKSDTLTAKERQL TVWQRRLAESTWSERRPAWAERQIVVSIPQLGDVIVNGKLDAVFHGGLDANDPTKQYTIV DWKTGCKPRKPQDIEHKLVQLDWYRLLLSYIEHVPLDRIDATLYYLSEPDEGARELHARA KTEQEILAELSSGIPEGSDND >gi|197324945|gb|DS990229.1| GENE 374 413164 - 414030 738 288 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0430 NR:ns ## KEGG: BBPR_0430 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 288 1 288 288 567 98.0 1e-160 MVAHDNTVMNATITNATPSADDESALPESTPIGTDPQRGVMSDVVPDVTPEEVPCTTIAS TPATATVPAEEMKPSQSVTYRPMHWNDLDDIVREFDRTWGQCSAAAGTPVSMQISRHFVL HYLEPTTRAIVAELDGRFMGVTLSRVAGEPLAFPQAKQELAAINGELNRSTLGAKTLSET EQWHEMELRMEREIDINDVALGEIELFLVAKSARGHGVGGSLWRQAMDYFANCQVARFYL HTDSSCDVSFYDHKGLNCIAARYAADHPEDGADMDDIFIYAGTPENTR >gi|197324945|gb|DS990229.1| GENE 375 414027 - 415445 1702 472 aa, chain + ## HITS:1 COG:mll7465 KEGG:ns NR:ns ## COG: mll7465 COG0477 # Protein_GI_number: 13476206 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Mesorhizobium loti # 14 452 2 385 407 148 28.0 3e-35 MSGAQQQSRSAASQSPYAQLFRIPGAKAFCISGAVARLPISMMSLGIVLALNHMYDNWTV AGSMSAMYILAVAAVTPFYARLFDRFGQRRVGPVALGVQIVAMLAFALAALARVPIPVLF ALAICMGLTQFSFGALVRTRWAYALRGSQHESLLNTAYALEAAIDEIVFIFGPILAAFLA TSVHPVSQLFVPTLACGIGGAVFFSLKNTVPPVLEPIDVVAAEIPDAQSNAVTGQPAPAL QTAGDHAAPTPSPEDNGFRLRRLHRPYSAKPRNVLTYRGILPLLVVFVVFNMSFTAFDVS MTATMKAAGAERFLGLQLAMFAVGSCIGAVIFGSREMKGSHWRHMVMFLTLLTVGYVVFR MVMGNFLILGVMEILTGLCVSPLFATGNLIVKDIVPARSLTEGLSWVTTAGSVGTSFGST IAGAVLDASSPHMSMMIPWIVTLCAVPLALLGWFLARKRPGWGTGRATNTAA >gi|197324945|gb|DS990229.1| GENE 376 415348 - 415716 191 122 aa, chain - ## HITS:1 COG:CAC0179 KEGG:ns NR:ns ## COG: CAC0179 COG0444 # Protein_GI_number: 15893472 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component # Organism: Clostridium acetobutylicum # 11 104 187 280 325 116 54.0 9e-27 MEPCQRTDHRLDVTIQAQILDLLMSLKDEYGLSALFITHDFGVVAQIADKVAVMYAGRLL ETGDVYDVFDHPAHPYTAGLLKTRPVIGRRIKRLYSLHDQFPNPAVFGRGTSRAGRAAPR TG >gi|197324945|gb|DS990229.1| GENE 377 415677 - 415925 188 82 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0432 NR:ns ## KEGG: BBPR_0432 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 13 82 1 70 70 129 98.0 3e-29 MHPLSEANGREYVQLVTWDKGLSHIAGNVNGNTIRHFPVVTEVSALHRRRLTLPTEDGGV LGVQQWLRAVWNHANGPTTGST >gi|197324945|gb|DS990229.1| GENE 378 415831 - 416004 94 57 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0456 NR:ns ## KEGG: BBIF_0456 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 57 3 59 59 99 96.0 4e-20 MPFTLPAICDSPLSQVTSCTYSRPFASDSGCTVAQPTSVFQNHSEVEGFARFDHWAT >gi|197324945|gb|DS990229.1| GENE 379 416098 - 416277 240 59 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0457 NR:ns ## KEGG: BBIF_0457 # Name: not_defined # Def: hypothetical protein with RelB antitoxin domain # Organism: B.bifidum # Pathway: not_defined # 1 59 1 59 59 99 100.0 3e-20 MASIPTTTMRIDPQLKEESSRVLEDLGLTLSGAVTIFLKAVVREQGLPFEVKKETSNGR >gi|197324945|gb|DS990229.1| GENE 380 416330 - 416665 340 111 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0458 NR:ns ## KEGG: BBIF_0458 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 111 5 115 115 211 98.0 6e-54 MRTGKVARIADRVRKELGELTPQERDLAINRVNTLHARLEAFMFGFHGVSTKYLQAYLDW FQWLVAFTDGFGGTDDDGLLARQLGKGLYRIRRRDCQRMTPPYMDYWRKAA >gi|197324945|gb|DS990229.1| GENE 381 416830 - 417657 1039 275 aa, chain + ## HITS:1 COG:MT2843 KEGG:ns NR:ns ## COG: MT2843 COG0289 # Protein_GI_number: 15842311 # Func_class: E Amino acid transport and metabolism # Function: Dihydrodipicolinate reductase # Organism: Mycobacterium tuberculosis CDC1551 # 27 275 1 244 245 233 57.0 3e-61 MGRHAYILVGNFGKVTDGFARKGRVMVRVSVVGAKGRMGSHVVDAVNGAQDMQLAFALDA GDDLMRITPENTDVVVEFTVPSVSLDNVLALVKRGVDVVVGTTGWTDERLAKVTAALAEA PRDDQAVFIAPNFAISAVLADYFAKVAAPYFESAEVIELHHPTKVDAPSGTAIHTARAIA DARKAAGLGAMPDATETDGGSRGQVVDGVHVHAVRLRGLNAHEEVLLGNAGEQLTIRADS FDRISFMPGVLLAVRKVADGGHAGLTVGLDKFLDL >gi|197324945|gb|DS990229.1| GENE 382 417821 - 418711 1077 296 aa, chain + ## HITS:1 COG:ML1513 KEGG:ns NR:ns ## COG: ML1513 COG0329 # Protein_GI_number: 15827797 # Func_class: E Amino acid transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: Dihydrodipicolinate synthase/N-acetylneuraminate lyase # Organism: Mycobacterium leprae # 6 296 9 299 300 223 45.0 4e-58 MHLLNPAPFGRILPAMVTPMKADGTVDFEAAQSLAKQLVADGADGLVVNGTTGESPVTHM EEKVELVRAVKEVVDVPVISGAGSNDTAHTVRMVEQTQEAGADAVLVVMPYYSRPSQDGV VGHYKAVDSVAERPIIVYDVPGRTGLKVRVETYDRLAELEHVKAVKDATGDLAAAVEKQQ RTGLAWYSGDDGLFLPFLSIGAVGIISVIAHVASSPMRQLVEAFDRGDIHQAQRLANQLA PLVHALNGDGYQAVMAKASLRIKGYLSSTAMRLPNIGPDADQLAKAEEGMKAAGLL >gi|197324945|gb|DS990229.1| GENE 383 418885 - 420726 2558 613 aa, chain + ## HITS:1 COG:ML1512 KEGG:ns NR:ns ## COG: ML1512 COG0595 # Protein_GI_number: 15827796 # Func_class: R General function prediction only # Function: Predicted hydrolase of the metallo-beta-lactamase superfamily # Organism: Mycobacterium leprae # 47 603 2 558 558 536 49.0 1e-152 MAQEQQKKNNSRRSRSGGASRRRGSANRNTSNAGSFKGQATAPQQDDVLIAPPKYRKGSM RITPLGGLGEIGRNMNVIEYNGHLLLIDCGVLFPEEEQPGVDLILPDFSYIKNRLDKVDA LVLTHGHEDHIGGVPYLLKLRPDIPLIGSKLTLAFVEAKCQEHNQHPTMVEVKGRDKLKV GPFNLEFVTVTHSIPDALAVYVKTPAGSLIDTGDIKLDQLPLDHKITDLVEFGKIGEQGV DLLMMDSTNAEVPGFVKPETSIGPALDQAFAQASRKIIVASFSSHVHRVQQVVDVAHKYG RKVVFVGRSMVRNMSIAADLGYLHIPEGTVIDLKKAHDVQDDKLVFMCTGSQGEPMAALG RIADGNHRDITINEFDTVILASSLIPGNEHGVYKVINKLVQLGARVVNRDNAAVHVSGHC NEGELLYMYNIVKPKCAMPIHGENRHLVANGLIAVKTGVDPKNVVLAEDGDVVDLYHGQA AVVGSVPCGYVYVDGDSVGEITDEELEKRRILGTEGFVSSFVVVDTEASEVVTGPKIFLN AVAEDESEFDKIRHQIVEQLQDAMMQGTKDTHRLQQIMRRTLGGWIARQLHRKPMIVPVV ADIAQDIIEEPSK >gi|197324945|gb|DS990229.1| GENE 384 420892 - 423504 4202 870 aa, chain + ## HITS:1 COG:MT2542 KEGG:ns NR:ns ## COG: MT2542 COG0308 # Protein_GI_number: 15841991 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase N # Organism: Mycobacterium tuberculosis CDC1551 # 1 868 1 859 861 633 43.0 0 MPGANLTRVEAEERKSIVSAPISYHVQLDLTRDARTFGSTTTICFGAEPGSETFLDLIAD NVTEIILNDEALDPAQVFEDNRIALTGLRRRNEVTVKADCVYSNTGEGLHRSVDPSDGNI YLYSQFEVPDARRVYAVFDQPDLKATFDFTVLAPKSWIVTSNMPVKSKEDVDDVITADGV LGDHEPESARSWTFETTPIMSSYLTAICAGPYAEWHTTYLNEDGRTVPMAQYCRQALAPA FAKDVDYLFDITKKGFAFYAKTWGVPYPYAKFDQIYVPEYNAGAMENIGMVTIRDQYVFE SKVTDALAERRVVTVLHELAHMWFGDYVTMKWWNDLWLNESFAEFTSTLATAEATEWHDA WATFCSGEKSWALNQDQLSTTHPIVAPINDLNDTYVNFDGITYAKGASVLKQLVYYVGRE KFFQGINQYLNKYAYSNATLADLLHELEKASGRDLKAWSAKWLEESGINTIATEVEENAD GTIASLTLNQTAPAEHPVLRPHRLAVGFYDEDPATGKIVRTDRFELDVDGESTVVAAAAG KKRPAFILVNDDDLTYTKLRFDADSLSFALANLQRFDDALARAVVWLSLWDMTRDGDLAA EKFIDTTLALLATETESTTFRYALSCMSTTAWHYTAPDRRADVVKHVAKELWKLVIAAPG GSDQQFQLVTAYLGYGEEGDAEFAEHAQGLFDGSLIVAGLEIDNNFTWTIINALSSVKLI DQAGIDAQLAKRDTTENREFALGAHAVRGDAAAKEWAWNEALNNADLTNMQLEAVARGFG ATPRPDLAEPYAAKYYDVVDWVWKNKSFHMAEALLEGLYPYYADPATLVELGHRWLADHE DADNALKRIVRGNVESSQRTLKVRDFNAAL >gi|197324945|gb|DS990229.1| GENE 385 424044 - 425708 1136 554 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0440 NR:ns ## KEGG: BBPR_0440 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 72 554 1 483 483 823 99.0 0 MVSRWSRVKAGCAFALACVLPCAWTPGAFAADDGRWPVANDVVAAAWKQGIDGSGVKVAV LDSQAVEDYPALKHASITYKLGRFHNVDDKTVECKVDGKPLTATIKSGEGGYYSSHGTDM LAWIVGDGSNYTSKWPGIMGAAPKADVLHITDGAVNAGPAVTPCDQKLAGDATSDSGADV KTAVDWDARILNRSQGGDLVSADYAGYVDALRHGVVMVGGRANDMNPGLDDLTGDPRSME TFPGVVMVNSVDESGNLASTSDVMDGNVAVLSYGMNVLGPVNPLSNVYNIAGNGGTSTAA AVLSSYLALAMQKWPDATGNQIIQSLIRNTKSGKGKPVIDPERKRGFGEVDLNALLTVDP TQYKDVNPILEYQMKAAAQYPDLKDWYTQDCKTNPDGVGTAADNVPCEAGLIGREYERQQ TAWKKVEQCRSDGGSDCMQYSATNTADGSTNNTTTPNGQAKPEGDPSQSASSGMPVWLWG VIGAGVAAIAAGVIIALVVSRRRRTRARIPVSGVAYGSVRSYPNGPVPSRPYSGGSQGSG GQAPPAEPGAGTAT >gi|197324945|gb|DS990229.1| GENE 386 425590 - 425862 171 90 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAVFDHTQTDPCHPAHILVDHRGVGARLRLPNRVPEQPPSQPQQPYPQQVPRQGFAPPQP YPPTEPAPGVPAPDNHGGNGNSGGHGRHSG >gi|197324945|gb|DS990229.1| GENE 387 426085 - 427470 2027 461 aa, chain + ## HITS:1 COG:Cgl0567 KEGG:ns NR:ns ## COG: Cgl0567 COG1109 # Protein_GI_number: 19551817 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphomannomutase # Organism: Corynebacterium glutamicum # 1 457 1 446 447 390 55.0 1e-108 MPRLFGTDGVRGLANRDLTARLALDLGDAAVRVLGNSAVREGLPEGRRRALIGRDTRVSG DFLASALCAGMSAGGFDVIDAGIIPTPGVAFLTSVLNVEMGAVISASHNPMPDNGIKFFA RGGFKLPDSKEDDIEAVLGQDWDRPTGAGVGRVSHETVTATNLYIDHLVSTIAPLNPDKT QPKPLRGLKIVADCANGATSVVAPEALRRAGAEVLVINASPDGYNINKNAGSTHPEQLQA MVKATDAVMGVAFDGDADRCLAVDEDGNMVNGDQIMGILARAKKEAGKLADNTLVVTVMS NLGLKLALKDMGIKTVQTAVGDRYVLEEMLRGGYTLGGEQSGHVINREFATTGDGTLTAL TLCNEVVKSGKSLKQLAADFPQLPQQLVNVPNVDKMAATTNAAVQAAVDKESKLLGDTGR VLLRPSGTEPLVRVMAEAATQQQADEVCDRLAKVVADELAL >gi|197324945|gb|DS990229.1| GENE 388 427512 - 428165 930 217 aa, chain + ## HITS:1 COG:mll4855 KEGG:ns NR:ns ## COG: mll4855 COG0242 # Protein_GI_number: 13474065 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Mesorhizobium loti # 28 183 3 148 176 89 36.0 6e-18 MFGKNTKVDLELNREVEQLLKTGGKERILPIVQAGEPVLRQQTVQYSGQLSKGTLNKLID TMHTTMLEAPGVGLAATQIGLGLALAVVEDHVRDDEDDPREIAEFPFHAIINPSYEPIGD ATRSFYEGCLSFDGYQAVRRRWLDITARWTDENGKQHEERLHGWPARIFQHETDHLSGEL YIDKAEIRSLTTYENLEDFWCDDPVPTDAAEELGFEL >gi|197324945|gb|DS990229.1| GENE 389 428501 - 429922 1537 473 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0467 NR:ns ## KEGG: BBIF_0467 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 473 1 473 473 866 99.0 0 MDGSTASISVDPRQQLDDIVDFVNDSWLASTDFDGPTFLWNHMISDASAQDDDNRNNVPV AAPNEVADVIGLTMQWYFDSISSIVPTAERTEDGVSMPRNDMPTFRIDSQALSGVDAVVG NALMSTRWVDATTNLAKSVEMTARFVGNAADRDGEGFDYLKELIQNVRVYMDSVARNADP QDGEKALRLITRVACNEDFQLNATQMVELLSCGLSFAQWDDTRMFAYDALNSALDTMDRF AKEAKIDEDGRCDGETAHDDGVIAAEAATGSTADASELIKRTVALSAHQQFEESIMFLRH DLMRVSGDAADADRFLVSHHESEAMADAYAARLIAAERWDELIGFIDMVERDRPNQYTVM FPEDLVAYEWESLREAAFEALGRWDELRAMYRERIIEAYDPSDLHTIAQLRAISGRDWAG QVRSIVTAYDDGSGRYARNPIYERLLIDERLSAEAERYCRTFPDARADLAAVL >gi|197324945|gb|DS990229.1| GENE 390 430019 - 430609 579 196 aa, chain + ## HITS:1 COG:NMA0429 KEGG:ns NR:ns ## COG: NMA0429 COG3727 # Protein_GI_number: 15793434 # Func_class: L Replication, recombination and repair # Function: DNA G:T-mismatch repair endonuclease # Organism: Neisseria meningitidis Z2491 # 61 187 10 136 140 147 54.0 1e-35 MSEQSVNHDERRQAAKGAGDEMTAAGKAEGKAARKAARKTGGSGKSGAKAKPGERYERGT RSYTMSHIRGKDTRIEVLVRRYLFSRGLRFRKNDRRYPGHPDVVLPKWHTIVFINGCFWH AHQGCSKYSIPKSNVEFWTAKLTRNHDRDIAQHAALESAGWHVIVVWECELAKPVREARL ERLYTEITAPGSIGVQ >gi|197324945|gb|DS990229.1| GENE 391 430797 - 431990 1350 397 aa, chain + ## HITS:1 COG:RSc0710 KEGG:ns NR:ns ## COG: RSc0710 COG0436 # Protein_GI_number: 17545429 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Ralstonia solanacearum # 12 392 11 391 394 282 44.0 7e-76 MSETKQPTMSRRAREAQPFRAMVFGERADEMIARSISVIKLSLGEPDFGAPPAVRDAMRE QYDGRALPYTAALGLPELRRAIADFYHERHHVDIDPRRIVITAGGSAALLLATALTVDPG DEVIVADPSYPCNRELIRSFEGVVVDVPTSAATRFHLNAELVDRAWSERTKAVMVTSPSN PTGTTIDFDVLKGVCDLARFRGAWRIIDETYLDLADREPDGSEVRSALLADPDAIICNSF SKFFGMTGWRLGWAVVPEYTIEAVDDLATNYYLCAHTPTQHAALACFTPESLAVCEERRQ ELLARRRIVVSGLERIGLPLEVVPNGAFYAYFSVAGTGLDAWTFCERALEEAHVALTPGR DFGPATADTHVRLSYAASREALTEGLSRLGKFVASLR >gi|197324945|gb|DS990229.1| GENE 392 432069 - 432731 86 220 aa, chain + ## HITS:1 COG:MT0516 KEGG:ns NR:ns ## COG: MT0516 COG0248 # Protein_GI_number: 15839888 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 10 130 2 122 344 102 43.0 8e-22 MVNLRSRVTRLGVLDIGSNTIHMLIVDAAPGARPDPEASTKSTVRLMQYVKDDGSIKKSG IEAILTAVDQCMELAEEYDITQLLAMATSAIKEAPNSNKILRKIEERIGQSVTVLSGTDE ARLTFLAARRVPQIQASGACRGHVKDVPLIGASGGRGAAPVRARGHVDHDARAAGGLDSP ACGHRAGAARGVAGHHAGAHDADRRRRHRGRRDHEVPERA >gi|197324945|gb|DS990229.1| GENE 393 432517 - 432816 379 99 aa, chain + ## HITS:1 COG:Cgl0404 KEGG:ns NR:ns ## COG: Cgl0404 COG0248 # Protein_GI_number: 19551654 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Corynebacterium glutamicum # 1 91 188 278 281 71 41.0 4e-13 MARLAGAVLRQSGREDTWIMTREQLEDWIPRLAAIEPEQRVALPGITPERTMQIVGGGIV ADEIMRSLNVHEVEICPWALREGAILRWLDQFGRTRLGF >gi|197324945|gb|DS990229.1| GENE 394 432869 - 433618 997 249 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0471 NR:ns ## KEGG: BBIF_0471 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 249 1 249 249 471 99.0 1e-131 MTAAHLTVAHCGEVSALTLGLPASAAIPEQKGTLPKGLFVAKAPVSSKLKQRLVNDIASI TMLALLRPANTAMGAGSGKMPEVLVIGLRVNTPGIPVEVIDLIAGQRKSGIVFVCVHEGE FEGVVREECALAVRRNVPVRAGHVPITKVFSGEWRPSGEVTLELPEGNADGGAKTMDDLW DSLCAQAILDSADGANLDARIARRDQIVTLKAAEEKLSRDHQRAKNPAQRNEIYAKLHKI RTQLAQLEQ >gi|197324945|gb|DS990229.1| GENE 395 433834 - 434643 706 269 aa, chain + ## HITS:1 COG:aq_1329 KEGG:ns NR:ns ## COG: aq_1329 COG0476 # Protein_GI_number: 15606532 # Func_class: H Coenzyme transport and metabolism # Function: Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 # Organism: Aquifex aeolicus # 3 257 4 260 271 305 56.0 5e-83 MAFTDDQLERYSRHLILKEIGVRGQKKLLAARVLVIGAGGLGSPAAMYLAAAGVGTIGII DDDVVDLSNLQRQIIHGTGNVGMPKVESAAETVTSINPDVTVKPYHIRVSAGNIAELIAG YDVIVDAADNFSTKFLINDACVLAGKPYIYGGALRFEGQLMTYVPGRGPCYRCIFRDMPA AGEVPSCKEAGVLGAVVGVIGSMQAVEAVKLILGVGKPLTARLMTFDALAMTCRAVPLPE REPDCPVCGEHPTITTLDPARYIQPACGV >gi|197324945|gb|DS990229.1| GENE 396 434822 - 436189 1578 455 aa, chain + ## HITS:1 COG:FN1903_4 KEGG:ns NR:ns ## COG: FN1903_4 COG2210 # Protein_GI_number: 19705208 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Fusobacterium nucleatum # 304 455 1 150 150 184 59.0 3e-46 MTDKRIDSPLADDDGDAIKRITPERFAELDKSTVTLLDLREPDEVLVHGLDGAINIPFNQ IGTRLSQVPNDKPVVVFCRVGDWSEQVTEILADRGYDAINLDGGFQAYREYLASLPQQRE NDVDDGDARPEKQAKGSAATLSIPTAAQQISLRGPEHESKSTGAADSAALHGSNGDTDGA QPHAVFVDAKGLKCPGPIVKVADTLRPLPIGTRLTAEATEDAFLSDIAVWCERVGNRLVS LERDENGVIHVVIDKTAHMPAPGAPAAACPSSPAGRAVSAETPAAAPQQTGFNPDGGDVR HDKTFVVFSGDLDKTIAVFIMANGAAAMGRKVTIFFTFWGLNILRKPKRVRVRKTLIERM FGMMMPRGTRKLGLSRMNMGGIGAKMIRWIMKSKNVESLESLMKQATDHGVRLVACQMSM DIMGIHQEELIDGVELGGVSTFLGSGETSDMSLFV >gi|197324945|gb|DS990229.1| GENE 397 436263 - 437240 1041 325 aa, chain + ## HITS:1 COG:Cgl1931 KEGG:ns NR:ns ## COG: Cgl1931 COG1957 # Protein_GI_number: 19553181 # Func_class: F Nucleotide transport and metabolism # Function: Inosine-uridine nucleoside N-ribohydrolase # Organism: Corynebacterium glutamicum # 1 325 1 315 316 286 51.0 5e-77 MTRKLILDLDTGIDDTLAIAYALASEQADDVRLIGITGTYGNVTVETGMRNALAVTDLLG HPEVSVYPGLDRPSTAPENFRYSPSAGTRRIHGDNGIGDMTIPDSRRSPETTAAADFIID AAHTYGKDLVIVPTGAMTTIAEVCRREPRIGELVGSITFMGGALTVPGNVTPGAEANIMQ DPEAADAILRSGVETTMIGLDVTHQAVLTRRDIERWRRLGTAAGDFLAGMTDFYIDAYSA TQPELEGCGMHDPLAVAAALDPTLVTTLGMNLQVDLEGAYRGRTIGDRAHDRLTDSHKTT QVAVRVDIARFKSQFLDRITALASH >gi|197324945|gb|DS990229.1| GENE 398 437366 - 437527 145 53 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0451 NR:ns ## KEGG: BBPR_0451 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 53 1 53 53 86 92.0 3e-16 MATLKDVAKAAGVSPSTVSYTLRGGAYVSQGTPGQVCAIIERNKNTTPVDILH >gi|197324945|gb|DS990229.1| GENE 399 437591 - 437803 117 70 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282534|ref|ZP_03645856.1| ## NR: gi|224282534|ref|ZP_03645856.1| hypothetical protein BbifN4_01785 [Bifidobacterium bifidum NCIMB 41171] # 1 70 1 70 70 113 100.0 4e-24 MVLKGAVTLRVLRAPFFDIVVTDLPVTPDSMRAEQRPTGIMHDIPVRVTSSTAADRTGQG GMRRAAAQRG >gi|197324945|gb|DS990229.1| GENE 400 438061 - 438306 83 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MILARLPFATPLSSVNRYATTCILPAVAHTSSYDNAPEPRTPSFPRIIPHSGTYARRPAG FTLRTIRAYPPDMYNGHSLPR >gi|197324945|gb|DS990229.1| GENE 401 438471 - 439400 1050 309 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0452 NR:ns ## KEGG: BBPR_0452 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 309 63 371 371 607 98.0 1e-172 MLPEDLQALPYIPVIVSATPWFVILAVLALILSVISRRWIAMLMALACIGLQVWWQWPFF SASTKLPAAVDAAMASTRADTGDMIARVMTFNVYKGHADAKAIVDIVRDQRVEVLALQET TNDFIKKLDEAGIHSYLPYSQVSSSDGVYGNGIWSATELGRPVDDEVGSSASFMPGGTVT FGGGKAQLRFVSVHTTAPIPGYWSRWKRSLDELASMRSREGSRYVFMGDFNATTDHTPFR NILGNRFSDAARQSGHGFTFTWPSNKLPLPRFAGIDHIVLDKDIIAGQMQVKSVAGSDHA ALLATIVVR >gi|197324945|gb|DS990229.1| GENE 402 439703 - 440002 556 99 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0476 NR:ns ## KEGG: BBIF_0476 # Name: xseB # Def: exonuclease VII, small subunit # Organism: B.bifidum # Pathway: Mismatch repair [PATH:bbi03430] # 1 99 1 99 99 112 100.0 6e-24 MTSKNASAASEPATSLTDKEREAIAQMPYEEARDKLIQAVQALEAGGLNLDQSMRQWEIG EALAKRAQSLLNEVKAKLDAAQAEQANSADTAGTQSNLD >gi|197324945|gb|DS990229.1| GENE 403 440116 - 441531 1650 471 aa, chain - ## HITS:1 COG:MT1139 KEGG:ns NR:ns ## COG: MT1139 COG1570 # Protein_GI_number: 15840545 # Func_class: L Replication, recombination and repair # Function: Exonuclease VII, large subunit # Organism: Mycobacterium tuberculosis CDC1551 # 75 438 3 367 415 248 41.0 3e-65 MSSACRGETITEKPANNDTVRRRRSRRQKNLSFLYVNLEGMNQEQALAIATQRPSEGGGE RIPKPFDQLPRLAAETTADNPWPVSVLSQKFHTAVERWPAAWIAGQITEINTRRAGSAYL TVRDDVEDIAISVSGWRAFASKAASFKQGDRVVVHGKADIWVKQTRLSFIGDDIRKIGSG GGLKEQIDQLRMKLKGEGLFDADRKLPLPEFPSCIGLICAPHARAEGDVITNVRLRWPTV RFNIVHAFVQGPQCPQSIVEAIHRLDADPDVDVIIVARGGGSFEDLIGFSDEAVVRATAG CETPIVSAIGHEDDWTLIDLAADLRASTPTDAAKKVVPDVHEQWQLIGNAIDRMRMRIDA RVGNEIRLVEGYANRPSLTQPLTMLEPYQRFVDDARRRMDIGLTRIVDDASLTVEKLHAS LTALSPQSTLDRGYAVVQNADGHVIDDAGKVGAGDHLTLTLRKGVITATAQ >gi|197324945|gb|DS990229.1| GENE 404 441738 - 444122 3901 794 aa, chain + ## HITS:1 COG:L70400 KEGG:ns NR:ns ## COG: L70400 COG1328 # Protein_GI_number: 15672255 # Func_class: F Nucleotide transport and metabolism # Function: Oxygen-sensitive ribonucleoside-triphosphate reductase # Organism: Lactococcus lactis # 12 785 11 729 747 877 55.0 0 MDALLMNASTATSSKVLVEKRDGRVVDFDPINIISAVKSAFADLDKQVGPEEEKLIRGFA DQIEGEITERYNGPAKIEDIQNLVEHALIDAHLYDVARAYTNYRLDKDIQRAKATDVNEA VSRFINQDPTLIHENANKDANVYATQRDLLAGAVSKAAAFNMLPPAVANAHMKGDIHFHD ADYSPFTAQSNCSLPNFWDMLANGFTLGNAPMASPKSIAIAATQITQIMKDVASSQYGGQ TANRADEHLAAYAKKDYEKFLEEARETIPDGMPVEFARRQVENAKANEPAKLHFGSREPL PMDTPFHTDVDELEQEREILAKVRTRKSIYDAMQTMEYQINSNRVSNGQTPFVTVGFGLG TDWFAREVQRAILLNRIRGLGKDHHTAIFPKLVFTVRHGVNADPGDPNYDLKQLALECAT KRMYPDVVFYENIVKITGSFKAPMGCRSFLQGWINPETGKDEEDGRMNLGVVSVNVPRIA IESHGSKERFWKLFNERMEVAHQALQFRIMRCKQATPVNAPTLFRFGAFGRLGASGNVDT LFKNERATVSLGYIGLAEATAVFYGKDWIRDHGWDPQGKEFALSIVKRMSELCKQWSKAE GYHYSVYSTPAESLTDRFNRMDREKFGRIEGVTDHDFYTNSFHYPVWLQPTPMEKLNYEK DFPYFASGGFINYCEYPCLQDNPKALEAVWDYAYNIGIGYLGTNTPIDHCFVCGFQGDFE PTDEGFKCPECGNCDPDKCNVTKRTCGYLGNPVQRPMVHGRHEEISHRVKHMSGETGHVT LADGSEREWFEEAK >gi|197324945|gb|DS990229.1| GENE 405 444277 - 444984 853 235 aa, chain + ## HITS:1 COG:SP0205 KEGG:ns NR:ns ## COG: SP0205 COG0602 # Protein_GI_number: 15900141 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Organic radical activating enzymes # Organism: Streptococcus pneumoniae TIGR4 # 27 213 2 185 196 235 59.0 6e-62 MDRKSTLHDFAAGETGRGPGVPSSLTNNPRSGQWDGRRMSKRMIADYKTFIVTDGEGVRN SLYVSGCPFHCVECFNSSIWDFQAGHEYTQKLEDKIVDDLKAPWIQGITFLGGEPMLNTP VLLPLARRIRGEFGHDKDIWCWTGYTWEELMRPGETPDKLELLQLIDILVDGRYLKDQHD SLLQFRGSRNQRILDVPRSLAAGRPVVWAKLHDQERDIPEMYLKDREAGEGAQAS >gi|197324945|gb|DS990229.1| GENE 406 445162 - 445290 130 42 aa, chain + ## HITS:1 COG:no KEGG:BLJ_0474 NR:ns ## KEGG: BLJ_0474 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 42 135 176 293 66 78.0 4e-10 MLGTGLGRTTLYMRGVRDGVVDVFAGSGVPGPLEVSDTAAGV >gi|197324945|gb|DS990229.1| GENE 407 445576 - 450600 7509 1674 aa, chain + ## HITS:1 COG:CAC2401_1 KEGG:ns NR:ns ## COG: CAC2401_1 COG1924 # Protein_GI_number: 15895667 # Func_class: I Lipid transport and metabolism # Function: Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) # Organism: Clostridium acetobutylicum # 17 731 5 663 663 688 49.0 0 MVDTANTAAESHDSKPLRVGLDIGSTTVKAVVLDQTNALNDVLFSDYRRHHANVRATVAG LLKDIHQTLVDLGRGDEPIRLAITGSGGLTLADNLHVPFIQEVIAETRAIDEEYPQADVI IELGGEDAKITYLKPTPEQRMNGSCAGGTGAFIDQMATLLDTDASGLNDYAKDYKTLYPI ASRCGVFAKTDLQPLINDGAAKPDLAASIFTAVATQTIAGLASGRPIHGTVIFLGGPLFF MSELREAFHRALAGKVDEFIVPTDAHLYVAYGSALIAGEPDGIDVDGVHFEPRTCDDIIA ALDGLKNLPANTPTMPPLFSSDQEREAFNERHHREHIHIGTLEGAKGPHFLGIDAGSTTI KATLVNDDREIVWSSYATNEGSPLTAAINIVKKIQSELPEGAWIARSCATGYGEGLITTG LHLDEGVVETMAHYRGAEMVSPGVTAVIDIGGQDMKYLAITDGVIDSIAVNEACSSGCGS FLQTFAQSMGLTIQEFTQAALNSDHPVDLGSRCTVFMNSSVKQAQKEGASMENIAAGLCY SVVRNALYKVIKLRDSGELGDTVVVQGGTFLNDAVLRAFELLTEREVTRPNIAGLMGAFG AALTARMHYEDVADDAHDHDAEVSEGQSADMAGSDDVSAEQDHEVVIDGVHHTASNILSG DDLDNMSMTSERDVCKLCQNHCKLTITTFADGSRYVTGNRCERGGDAKKKRSDRPNLYDY KYKRCFAYRRLTDKKATRGEIGIPRVLNMYENYPFWFTLLTSLGFKVMISGRSSHELFET GIESIASENICYPAKLVHGHIKWLLGKGVKNIFYPCVSYEDNLVPNTDNHYNCPVVANYP VVIGANMPELREDGIRYMHPYFNLANHELMVDRIVEEFAWANVSREEAETAVKAAYAEDK IFKNDVQEEGFKALAYMKEHNCRGIVLAGRPYHIDPEVNHGIPETICALGMVVLSEDSIC ELQPGENLHLSDYLSEGEEDPRKKNANGFRHVGDRKVTVSRMPLRVTNQWAYHSRLYAAA HFVASYPGLELVQLNSFGCGLDAITTDQVAEILADKADVYTLLKIDEVSNLGAAKIRLRS LKAAVEEREANKRRLAAQAQSQSRQQVLPNKQDQPVGPSAAELAAQRQAKEELAAAEVQL KAAQDQLAAAQAAVEAAEKQKNAAEQPAPHSTGFRKTGSEAPTPGRQVMLDTVMKSNPQL TKAVKDASHRAAQAESRLADTSPNGKSARKAAKKSGHNTATMSKYANKVPFGKSMKKDYT IVGPQMSPIHMSLVESVIRSGGYKFDILKTASREDVELGLKYVNNDACYPAIMVIGQLVD AIVKGKYDPDHVALAITQTGGMCRATNYFGLIRKALIDAGYPQVPVIALSTQGFEDNPGF KATPTLLHRAIKALVVGDLLLKCLMRVRPYEVEKGSADKLYQMWDTIVRETIEHHGFSDT AKKKIGKHYLPYQTLLKEIVKSFDALPLRDIPRKVRVGVVGEILVKYHPDANNHVVDVIE SQDCEAVVPGIMEFMTTRPYITDWNEKNLGMGGNKKLYSLMRWGLDRYLNPVRAAIDLAH GKFSQDLPMPELVKKASEVTSVGVQAGEGWLLTAEILELIESGCPNVICAQPFACLPNHV TGRGMFGKIRRLHPDANIVSIDYDPGASQANQLNRIKLMIAAAKKNHQKLTAAD >gi|197324945|gb|DS990229.1| GENE 408 450623 - 451534 1071 303 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0458 NR:ns ## KEGG: BBPR_0458 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 303 1 303 303 551 100.0 1e-155 MSVAYHDGMKQSRKCGSGSPSKATDGSGRDAAKMGTKTNTRTRAIIVVAAVLLIAAIVGT VFLVRSLTASPDSSKTDDAQANATQAFPKFSFGDTTITQAEFTQAWSSQRTAAVSYFKQK HDVNLNARDADWTASYGGEKPVEWLTKQTIDTLRFRHAAYLIAVSYGLVDDDSYTGIVKR METLNANNRQKREAGQVIYGRSEYDIASYIDYEMTALKNDYVDDATKPGMNPSETEVQEY YDAHDWTVDGVEGKAPLADVKANVKTALRTERYRERVQSKADKIDVSTLPWKRLYAYAAT LVG >gi|197324945|gb|DS990229.1| GENE 409 451610 - 453160 1689 516 aa, chain - ## HITS:1 COG:CC3414 KEGG:ns NR:ns ## COG: CC3414 COG3572 # Protein_GI_number: 16127644 # Func_class: H Coenzyme transport and metabolism # Function: Gamma-glutamylcysteine synthetase # Organism: Caulobacter vibrioides # 113 447 14 342 453 143 29.0 7e-34 MTMPPSGVIHRLATPPICKETLQVHKYSGTHRLRQWGYGVFGISLTVITSPLYPLNGTRE ISRNVQHSDANRLSILCITAPLWPMESAGTICPMTTPRISYAHLLAKPNPKHIDSLLRFF EEGRSKRGTGGFGVEIEHLPVHNGDDTAVSYCEENGVETLLKRIAPYYDKEKEYWENGHL VGLGREGIAVSLEPGGQVECSLGILKTPQELLTLYRSFRRDIDPVLDELGFRLVNYGYQP KSSFADVKVNPKDRYDAMTRYLGRVGQFGPCMMRCSASTQVSIDYVDEQDSIDKLRLGTI IGPILAWYFRNTPYFEGTPNPWPLLRQRMWDYLDPQRTNVIPGLFDKRFGWEEYAIDVLS TPLMFADLTHTPEARSLSGKELHHPAFYENAGEVYPDRELNPYEINHIISTHFNDVRMKN FIELRHWDSLPIERAERLTEIIASLFYVPENRERLESYFENIREEDVFEAKANLQARGAQ SAPYGQPLEFWKEFLGLEGLLADEPGDPKHPDVFQE >gi|197324945|gb|DS990229.1| GENE 410 453262 - 458079 6628 1605 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0483 NR:ns ## KEGG: BBIF_0483 # Name: not_defined # Def: conserved protein with the pectin lyase fold domain # Organism: B.bifidum # Pathway: not_defined # 1 1223 1 1223 1223 2131 99.0 0 MIAAAVAMGTAFALIAPSSALAADATPAAASTGTTYYVSSTHGDDGNAGTDQGHPWKTLD KVNAIATDLKPGDSVLLERGSTFQDQYLHIKDTSGTADAPITIADYGDASAKPVIAANGV KGSRWYQNYRASVGNHQNKGTVSSAILLKDVSYITVKNLEITNDDPDVYDPIDTWKWTDT ADSDGTKLDRSADRMDRTGVAGIAENGTTMSHVTLEGLNIHDVDGNIYNKHMANGGIYFM AHYARENKNAADNTWLQNHISRFDHITIKNNIVKDVDRWGIAVGYTAYLNFIDAAWGDGS IDDDLIAKYGQTNVTIENNYVKGAGGDAITLMYCDRPVIQYNVGDSVSKHMNDVDYPHDR EHGGRYGGWVAAGIWPWRCKDPIFQYNEMYNNLNSEHGNGDGQAWDADYGDGTLYQYNYS YGNSFASLMICNQYAINTTFRYNISQNDRRGVFDLPSNGPGNHIYNNTVYIGKDSAVLTG RSNSQAKFENNIFINATDTKKTETWNRGNQHGGQTYDKNMYVNYANRPASDSNAVEVADV KTVLANAGHAPSAPKADGSVYGRSGSEFDGYKPVDGSPAINAGKVISDMNDYAVTNDFFG NTIKGTPDLGAVESNVLSVSGKVNAYETATVGGSKVVYVPFTAKNPTTVKQLRAGLTVGD GSVANVYRGGNKLAADAAIQSDDVLRFEVEGTSNTPIEYTIAQKNAWNWVDWFKTATGVV WNSQKQNGADGDWTDITTFSTEYPMSKYNEYYGAGLTGNLSDLPAVGADRPGRQGLLVDD PGAAGGTAIVWKAPKAGTVKVTLGRDNEPQRRNANASGTVTLALTQNGETLCTADISTAQ TKNDDFVNCLKSDKGTVQVNAGDVIRIAATAASDAAAPDLYVSPVVTYQDVAPVESQTAQ YAASYDAVSAKVGTKATATVKFTKGGAAATPTGVKSYALKTAVDGVAVDAATGAVTYTPG ADAYSTTKTATVVVTYSDNTTDEATVTFNVEKSNAQKYNVLYPAVSGGAGVALKRTPKFT LKADSAAASIPAGTKFALGTGAPAGASVNAATGEVTLTSTQAGTITVPVTVTFSDTNESI EATATFTVTAPAALGTSKLETGTANGANVIYVPFTAKTPTTVADLLALVTAEPDSALKAV YRDGTKLEDAAAVKAGDVLRFYADGSTFTADYTVVQKNAWNWVDDFKTDSQGPIWTSQRQ VSGKWQTITDFGSDVYPQTYYDKYYGVGVDYQNKNLPTNRSAIHGLIADNPGDSAATAMA WTAPKAGSVKVTLDKVTGAHVEPYIRQSGSNGKDVVLKLLKNDEVICSATMTDSFATATG FNECLASAKGTVKVAVGDVLRFSVDAATGTSKSSIHISPVITYTDADEPSPEPGLSEQYA AAYPASVAAKVGEKATAAVSFTKGGAAADAPAGTTFAVAGDGFTVAADGTVSFTPTDAQA GKTVTATVTVTYSDKSTDTATVTFKVAAKTEPEPKPEPTDPKADLRKEVESASKLDEKDY TADSWKVFAAALDNAKAVLEDKDATEAQISGALTTLKSATAALAKAGDTGKPDDGDKPSA GKPNDKGDKGNGLSKTGASVAVIGVAMLLLAAAGFVTVNVVRRRR >gi|197324945|gb|DS990229.1| GENE 411 458301 - 458897 435 198 aa, chain + ## HITS:1 COG:CAC3413 KEGG:ns NR:ns ## COG: CAC3413 COG1846 # Protein_GI_number: 15896654 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Clostridium acetobutylicum # 31 162 11 141 143 65 36.0 7e-11 MLCCLNVRNAIFASTDMVWRGMEQRILSIEIRAVSKAVDRYLGESMPLSAKGTTGGNAHI IMFLARNRDREIYQHTIEQKFCITRSTASRVLALMEKNGLIARESVAHDARCKRIVLTDK ADAIVADLKANGERVERLLVDGFTQTEQDALHDYVERMRANIERAQHEFEHQTSSQTPST AAPEYSEAEVINTKEENK >gi|197324945|gb|DS990229.1| GENE 412 458894 - 460777 2435 627 aa, chain + ## HITS:1 COG:CAC3414 KEGG:ns NR:ns ## COG: CAC3414 COG1132 # Protein_GI_number: 15896655 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase and permease components # Organism: Clostridium acetobutylicum # 23 606 1 576 577 619 53.0 1e-177 MSSTEEAIAQARKAVEPDKPKHVLRTLGKSIREYKKASLLAPALVAVEGILEILIPTIMA SLIDEGITGGSMPSTIKFGVILLICAMVSLGAGFLSGKFAAIAGAGFAKNLRQDQFKKVQ GFSFTNIDRFSTGSIVTRLTTDVTNLQNAYMMIIRLGVRAPIMVIVAWIFSFRISPSISL VFLACIPILAIGLCGLAVLVHPVFERVFHTYDALNNVVDENLQGIRVVKSYNRESFEVGK FGRISQRIFKDFTKAERIMSFNSPLMMVCVYASMILIAWMGAQQIVASGNNAAVGLTTGD LTALVTYAMQILMAMMMLSMIFIMVIISQASAERICQVLQEESTVTDPASPVTDMADGSI EFDHVTFRYSDSSEKPVLDDINLKIRSGMTIGIVGGTGSAKSSLVQLVPRLYDVSSGSLK VGGVDVRDYDLEALRDQVAMVLQKNVLFSGTIAENLRWGNPNATDEEVRHAAQLAQADGF VQEFPDKYDTYIEQGGTNVSGGQRQRLCIARALLKKPKILILDDSTSAVDTKTDKLIRNA FHNEIPDTTKIIIAQRVASVEESDMILVMDNGRIMASGTHDELLATCDEYRSIYESQTKN QARPEELVAAEPAGAQSETETKEGETR >gi|197324945|gb|DS990229.1| GENE 413 460774 - 462789 190 671 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 447 653 16 226 245 77 29 1e-12 MSNDQSFKNRKPGMGKAEPGTIKRIFSYIFQYKWRVAAIVICILIGAAAQAGSALFLQSL IDTYILPMVGETNPDWAPLLRAISLMGCLYLAGIVASWAWQWLIVTVEQGTLKKIRDDMF AHQQKLPIRYFDSHEHGDIMSHYTNDTDTLRQAISQSFPQMFSSIISALAALLSMLWLSI PFTAFVIVFTVLLYFIVRKIVSRSGRYFVKQQMWIGDVNAFVEESVNGQKVIKVFNHEDA TQKTFDEKNEELFEASAEANTWGNVTMPVVGNMGYLLYILLAIIGAAVSLSGVNDLGLTG VKPLTLGTLVSLLTLSRSFINPIGQVSQQLTMVMMALAGASRIFKLMDEPVESDNGTVTL VNVELGEDGRTMREVDHETGHWAWKREEGDDGTRSLKAAEKLHGSAREVAVKAKEQAITS PDGRYTLLRGDVRFTDVTFGYNPDKPVLHDITWFAKPGQKIALVGATGAGKTTVTNLINR FYDIQQGQILYDGISVAGIKKPDLRRSLGIVLQDVNLFTGTVMDNIRYGRLNATDEECIE AARLVNADGFIRMLPKGYQTVLEGDGSGLSQGQRQLISIARAAVADPPALILDEATSSID TRTEEVVQAGMDNLMKGRTVFVIAHRLSTVRNSDVIMVLDHGNIIERGSHDDLIAQRGEY YQLYTGAVELE >gi|197324945|gb|DS990229.1| GENE 414 463027 - 464013 1188 328 aa, chain - ## HITS:1 COG:CAC2424 KEGG:ns NR:ns ## COG: CAC2424 COG4667 # Protein_GI_number: 15895690 # Func_class: R General function prediction only # Function: Predicted esterase of the alpha-beta hydrolase superfamily # Organism: Clostridium acetobutylicum # 52 319 5 269 283 135 27.0 1e-31 MTVKATDNGHKATAHADTGARDAGAAETVESQRTDTQRSDVSAQSKPSHRTALIDVGGGF RAIFGAGVMDRCQEEGITFDHCYGVSAGSANMVSFLAGQHGRNHKFYTEYAFRKEYASFD SYVKHHNFANLDYVYSTLSNHDGEYPVDYEAFAANPTGFTVIACNALDGSAKYFDKSDVH YDDFNIMKASSAVPVACEPYVIDGVPYFDGGIVDPVPVQKAIDDGYDRIVLVLTRPKDVL REQKRDIAPARILRHSYPAAAERLLNRYATYNDEVALAKEYERDGRVLILAPDDLCGLST LSKSFEGLELMYRKGYAAAGAIANYLAS >gi|197324945|gb|DS990229.1| GENE 415 464092 - 464901 729 269 aa, chain - ## HITS:1 COG:CAC3250 KEGG:ns NR:ns ## COG: CAC3250 COG0796 # Protein_GI_number: 15896495 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glutamate racemase # Organism: Clostridium acetobutylicum # 6 267 7 254 256 199 40.0 4e-51 MTSTAPIGVFDSGLGGISVVRQIVQDMPHERVLYFGDSANAPYGTKTPQEVRRLSFDIME RFMSQGVKAVVIACNTATSAAVNALRDHYDIPIIGMEPALKVACDRGDTAAGDGPAPARH MPQHVIVAATPLTLREHKFAALMDRFKANNMISPQPCPDLVEIVESGRLCDHDLVMRTLH RYFDGYDLPSIDSVVLGCTHFVFYRDYFRELLPSTTAIIDGNRGTVRHLGMVLESLGKLA PEEMDGGVEIANSDSGERIAALSRELLHS >gi|197324945|gb|DS990229.1| GENE 416 464898 - 465101 113 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGWPSDAWLHSRCMAARLLRLRPCDDIVRCGRKRMRRITVCDSMGAFDDTASRQEGLAAR RWKGDGI >gi|197324945|gb|DS990229.1| GENE 417 465129 - 466028 1023 299 aa, chain + ## HITS:1 COG:Cgl1898 KEGG:ns NR:ns ## COG: Cgl1898 COG0253 # Protein_GI_number: 19553148 # Func_class: E Amino acid transport and metabolism # Function: Diaminopimelate epimerase # Organism: Corynebacterium glutamicum # 1 294 1 271 277 137 39.0 3e-32 MSIPKSVTKAHATGNDFIAYLDSDGRFEPTADEVRQLCDRHFGIGADGLLRLTKPQYVAD LSEAQVAACDDGDAEWFMDYRNADGSLAEMCGNGTRAITLFAQRCGVASTQVEEPFRLGT RAGVKTLRPLGDVAPYGRDVFRVDMGSWRRGDLDAFTVTIPGTPGAARGTFVDMGNPHVV CVIEDAMSTLPRVEDLDLVTKPEVSPVLESDQNAEFVRVDEIDAAAGTGEATMRVNERGC GETLSCGTGLCATAITLRAKTGVDHWDITVRGGTVRVDVTDETVALTGSATLVADVTLI >gi|197324945|gb|DS990229.1| GENE 418 466129 - 466788 801 219 aa, chain - ## HITS:1 COG:MT3046 KEGG:ns NR:ns ## COG: MT3046 COG4243 # Protein_GI_number: 15842521 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 33 211 26 200 210 69 29.0 4e-12 MTHNSDAVKQADISVDAGLTGWRHGAVWTYLVMLAASAAALFVSLMLSAETLQLARNPGV KLGCDVNAVVSCSTVAESWQAEFIKFAGLSFPNAFFGIAAESVFVTIAVIGLSKVVVPRW FALCTWLGGLAALAYAYWLFAQSMFVIRALCPWCLGLMFATTIQFMALSHATVSVQRMPA KSNGLRKYYRLNFDLMVDVVWIIALIVLIIVVDGPAIFA >gi|197324945|gb|DS990229.1| GENE 419 466924 - 467805 954 293 aa, chain + ## HITS:1 COG:CAC1092 KEGG:ns NR:ns ## COG: CAC1092 COG0613 # Protein_GI_number: 15894377 # Func_class: R General function prediction only # Function: Predicted metal-dependent phosphoesterases (PHP family) # Organism: Clostridium acetobutylicum # 16 281 6 268 274 126 29.0 4e-29 MTRLALAAAPPRSGWDIHCHTVYSDGTQTPASLVELSRHIGLHGASISDHDTTSGWADAE AAAREEGMRLLRGTEITACDGPVSVHMLAYQYNPNDRHTSDLFARTRQARLKRTKAMVAR LGEDYPISWQSVLEQVHEGERTTIGRPHIADALVAAGVYRTRSEAFADAVSATSKYYIPT PSPTTHEVLAAVAAAGGVVIIAHPGAVNRNVTLLSDSQIETLIEEGLDGLEVWHRDNPPQ QRERLYAIAQAHQLLVTGGSDWHGAGKPNHLGENLTDDETVAEIVRRGAIPLV >gi|197324945|gb|DS990229.1| GENE 420 468377 - 469885 1310 502 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0495 NR:ns ## KEGG: BBIF_0495 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 20 502 13 495 495 857 100.0 0 MTQRSKLMLAALASAAMPSIVMAGVRDSERANDTDDAAGIDQAVMQDAAGRMYDIYACDT EDGRKRLTGRVQAARTLERAKDPGGLGFALDTVLAFVDGREKSTLTGGATVMVAAHNDGV ARPLDLLTLDDCAAMGTAIGAIHRLRPNFLQAESYPVFSTGQIRAQLTAWIKRLRQAGHV PPEITSSWGRIIETEGLWSFVTCPVHGGFSDGDVLFSGATVTAVTNWQNMQVNDPARDLA WIFGKIDEDHRNAVLAAYGRMMGSRLDDLIMLRANLWLQMEQVGEFIDALNRADSQKIIQ FKAQVERLAHQLGAFTRKTAPATTSGAQSSKPPSTITVGTLLNDDDRRKVAAATQAGARV PDDIADPNDNTDETDRTGSADIKAAGEFDPQTMGIRYSAETEHVTATAGTTSETMTLSRG DSDDTGDADATGATDDTDDRTPNATPAAHIEDAPSQATPATPDRQDGASAARDTPTIVIP LLEREERAMRDAQSELQSSQGK >gi|197324945|gb|DS990229.1| GENE 421 469903 - 471507 1571 534 aa, chain + ## HITS:1 COG:MT3291 KEGG:ns NR:ns ## COG: MT3291 COG0210 # Protein_GI_number: 15842783 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Mycobacterium tuberculosis CDC1551 # 36 467 1 438 700 239 41.0 9e-63 MSRLAGGNWPYDSRKITVCPLCWQRIGRACATMEDMSASSETILEGLDDAQMSAVTALDG PVRIIAGAGAGKTRTVTRRIAYACARGDWDARKVLAVTFSVKAAAEMRARLQTLGVGDDV TAATFHSAALQQLRRVWDDIFETPLPHVTSDQRENVERAIRRVTNAADIDAQQVRDVRAE INWTKVSLVAPDDYPRVCSATHRQPPAELDPQRFADVITAYEWEKTVRGQIDFDDILLLM CHVMDDYEELAASIRSSIGWLTVDEYQDVSPLQHRLMTLWLGNNRNVCVVGDPAQTIYSF AGASSYDLLHFADEFRPLAADVTLNTDYRSTPQVVRYANRVLAAAPEREQYLVLRSARSG GPRVGHTCYDTDEEEARGIAARIARLVAGGVDPGACAVLTRINAQQPAICAALRAEGLRY RVRRDSGWQNSALADDAQSRLALLEAKGLSAAASSVTVSTIHASKGLEFPYVFIVGCSEG LIPYGASIAGEALEEERRLLYVGVTRAEDGLHMSYARAKDEGSRPNRLPSRFLS >gi|197324945|gb|DS990229.1| GENE 422 471565 - 473109 1949 514 aa, chain - ## HITS:1 COG:MT3287 KEGG:ns NR:ns ## COG: MT3287 COG5282 # Protein_GI_number: 15842777 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 75 491 82 471 472 209 34.0 1e-53 MDENAMRQWFIDCFGPVQGEMAWNQLSQLPDEIREQLMSQDIGKLPKPEEVQSLMQAFTA GGLNTFGDMKQTVESGPINVKLAKSIALQKANADGSQGTVSAQSADIARRALSEANLWLD TACTFDPTSGETQMLTRAGWVEDTLESWAKFAGPVAQSMNDALASVISERLGNSFNGEIA GMFAGPVPIPVPDGMKDPGQLIKLLGNTSFAMQLGHAAGDLSHEVNGSFDQGIALLKNPA GGLIMQNIEEYATSLDIPVAEVTAFLALREVAHARLFAGVPWLMPRFEALIGKYARGITI DLDAMEEQLRDAGAMDPESISGAVNLTKVGIPDTPEQREALVSLETLMALVEGWVDCVTW RAGMAHIPHIEQLREMMRRKRAVGGPAERTFESLLGMQLRPKRMREAAALWEQITAERGV EGRDGAWSHPDLLPALPDEAKTVDSGAAGDTASGVTRAGTDDGASVAGDTKDGTKDAANG AEAQNDGGAIDWDAELSKLLDEDGGENDENDSAK >gi|197324945|gb|DS990229.1| GENE 423 473171 - 474019 1035 282 aa, chain + ## HITS:1 COG:Cgl0759 KEGG:ns NR:ns ## COG: Cgl0759 COG3480 # Protein_GI_number: 19552009 # Func_class: T Signal transduction mechanisms # Function: Predicted secreted protein containing a PDZ domain # Organism: Corynebacterium glutamicum # 134 271 196 343 350 94 38.0 2e-19 MHENNQLHAHSALSRIRNYLGSHSLRYFAGAIAVILAVVTMMLPSAYTVEGPGPTQDVLG SSSGSDVISISGAETHKDSGKLLLVTVNAAGVPGYPVTNAQALVAWLDPKQTVMPQEVVF PVGQTSEEYAEESSHEMDSSQSSATNAALSYLKGKGMDVSGVKVSMHVDDIGGPSAGMMY ALGVIDKLTEADETGGKTIAGTGTIDAKGKIGAIGGIRLKMLGALRDGATWFLAPESNCN EVVGHVPQGLHVVKVSTLDEAYQALVAIGQGHTDGLAGCTAS >gi|197324945|gb|DS990229.1| GENE 424 474224 - 474640 512 138 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0499 NR:ns ## KEGG: BBIF_0499 # Name: not_defined # Def: hypothetical protein with DUF3052 domain # Organism: B.bifidum # Pathway: not_defined # 1 138 1 138 138 227 100.0 1e-58 MNETASQNGEEFGFQSGDIVQEWLWDDDVDDSVRAKIEDLTGEDLVDEDYDSAVDGAIVW WRDGDDEDELSDTIVDAYSVVGDDGPFWVLTPKPGRTGAASSSTVQSAAKTAGMNAATPL TVSPDWNGIRLRAFGKGR >gi|197324945|gb|DS990229.1| GENE 425 474824 - 475867 1152 347 aa, chain - ## HITS:1 COG:mll4964 KEGG:ns NR:ns ## COG: mll4964 COG1609 # Protein_GI_number: 13474146 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mesorhizobium loti # 4 344 1 335 341 143 33.0 5e-34 MTTMKEVAERTGVSVSTVSLVLNDRDEGRVKPAIAEQVRATAKRLGYRPNPLARSLRTSK TRILGFISEEIAATPHAGGIILGAQDAASKLGYMLLTVNTDGNSDEAREIATLKRYGVDG FLYAKMSNRFTDVPKPLHDYPLVLVDATDRTGRYASIEPDETLIGYDATKRLIDACCASI AYIGCSEPMLAQQGRLEGYRRALLEAGMPFDESLVVAVPNNGPALQTVTDLFERRRPDGY FCFNDARAWYVYENAARRGLVVGRDVSVVGVDNHRVFAETLEPQLTTVELPHYEMGYWAT RKLVSLIEGREPDDDEPETTAPLPPLDASIPAKIHCTLIDKQSVAQR >gi|197324945|gb|DS990229.1| GENE 426 476012 - 476464 645 150 aa, chain - ## HITS:1 COG:Cgl1190 KEGG:ns NR:ns ## COG: Cgl1190 COG0011 # Protein_GI_number: 19552440 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 64 146 33 115 117 75 48.0 3e-14 MATPAGTYRIYRPSNTATTNQSGGIHMTIDRNAVTQEVPIDPETGKPYLNTVAAIQVSAN GVGSEVSPYVAQAVEVIRESGLPQETNALFTNVEGDLDEVLKVAGEAAKKLAEQGYRTSL VLHMDIRPGFTGQLTEKPKIVDAILSGKSE >gi|197324945|gb|DS990229.1| GENE 427 476490 - 477377 996 295 aa, chain - ## HITS:1 COG:CAC3095 KEGG:ns NR:ns ## COG: CAC3095 COG0351 # Protein_GI_number: 15896346 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase # Organism: Clostridium acetobutylicum # 17 292 7 260 265 268 50.0 7e-72 MTEQLDTTAAQSTLPPVLTIAGSDSSGGAGIQADLKTMLANGVFGMSAITAITAQNTMGV TGVQNITPDMVAAQIDAVYTDIPPAAVKIGMVSSAELICTIADRLEAHHARHIVLDPVMV ATSGAKLIDDDAITALTERLFPLAEVITPNIPETEVLLDLIAHRGASLDPAKWAEDTDRE STRIVSDTAMEDAGRTVSEHYGCAVLVKSGHGVADASDLLYADGVATWIHGVRVDNPNTH GTGCTLSSAIASNLAKGEALPDAIRHAKDYLTGALGAQLNLGHGSGPMDHAWHWR >gi|197324945|gb|DS990229.1| GENE 428 477494 - 478702 354 402 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 148 391 151 396 636 140 34 1e-31 MANDDILRRDGVLARITGFDEGRTAYYAVMPNGHSTQLTFPSQEIFDIGDVLLVGKDFYT KVPPSVWPVKPRVGVIRRALEDCVVIETSDGLELLEGEYPVDIAPGNTVEFTDLFGIERV LWPTAIRPGESDHDDDIKQYRLTPSADPSLTFAAFGGYERVIARAKELIETQLGNSAQMR AIGAKPIKGVIFTGAPGTGKTHLARIIANVADAQFYLVSGPTIVSKYVGDSEETLRMIFA AAQSDKRAIIFFDEIDSIASSRETDTNGVGKRLVAQLLTLMDGFESKGNVVVVAATNRIE DVDPALLRPGRFDWQIPFPMPSEHDRLRILQVQAASLSCEGELPLTDVAERTEGWSGAEV CAIWTEAALVAAKDKRAAIRAGDLMTAFERVEHRPEFRARRH >gi|197324945|gb|DS990229.1| GENE 429 479292 - 479765 373 157 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0504 NR:ns ## KEGG: BBIF_0504 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 157 1 157 157 297 100.0 1e-79 MSTTNNSLSILSKSGSWIRGNPGRFACMLIVAVLYGLLLACIVQPDYEGFMAAALMINFL VPPVLLIINIAAACFRKSTWKFPLGCVAVSLPLLFALIHGFEGGPCAKADVCTSIGGWQL SWGCMEQIGYFMLVFTVFSFVGFALVRLIKHFLRAHR >gi|197324945|gb|DS990229.1| GENE 430 479888 - 482644 4304 918 aa, chain - ## HITS:1 COG:Cgl1275 KEGG:ns NR:ns ## COG: Cgl1275 COG0422 # Protein_GI_number: 19552525 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine biosynthesis protein ThiC # Organism: Corynebacterium glutamicum # 329 855 22 548 587 787 71.0 0 MSNEYPFASMRDSFDLSAYFVVGPQDCKDRPLTEVIDQALHGGATFIQLRAKGADASELT EMARDIAQIIEDNEKSDSVAFVIDDRADVVWQARRKGIKVDGVHIGQSDMEPREARALLG DEAIVGLSAETESLVRLINELPDGCIDYIGAGPLHVSSTKPEASVGGNDGSGKTLDAAQI NTICSASEFPVVVGGGVTAADMAMLAGTKAAGWFAVSAIAGAEDPEAATREMVSGWKAVR ADERHGYAPRIVTHTPATDTQAAQEGSAAAGAEATEKKFTNAKDAKDAQKLAKQQRVDIA ARGSKQRDKAHIRKTKSVPFSYEYGSYDLEVPYTEIKLSDTPGVGPNAPFHDYNTEGPKC DPKEGLKPLRLDWIRDRGDIEDYEGRRRNLQDDGKRAIKRGRATKEWRGRTHQPMRAKDH PVTQMWYARHGIITPEMQYVATRENCDVELVRSELAAGRAVMPCNINHPEAEPMIIGSAF LTKLNANMGNSAVTSSIDEEVEKLTWATKWGADTVMDLSTGNDIHTTREWILRNSPVPIG TVPMYQALEKVEDDASKLSWELFRDTVIEQCEQGVDYMTIHAGVLLRYVPLTANRVTGIV SRGGSIMADWCLRHHQESFLYTHFDELCDIFAKYDVAFSLGDGLRPGSLADANDAAQLSE LMTLGELTERAWAKDVQVMIEGPGHVPFDTVRMNIELEKAVCHGAPFYTLGPLTTDTAPG YDHITSAIGATEIGRYGTAMLCYVTPKEHLGLPNKDDVKQGVIAYKIACHAADIAKHHPH AMDRDNAISKARFEFRWLDQFNLSYDPDTAIAFHDDTLPAEPAKMAHFCSMCGPKFCSMA ISQNIRKAFGGEAAQQQIVADAVTGKIPEGVETPANPVTDDTVVSANVLSPEEILAGMDA MGEKYRAQGGKLYSKASE >gi|197324945|gb|DS990229.1| GENE 431 482739 - 483632 1008 297 aa, chain - ## HITS:1 COG:SP0717 KEGG:ns NR:ns ## COG: SP0717 COG2145 # Protein_GI_number: 15900614 # Func_class: H Coenzyme transport and metabolism # Function: Hydroxyethylthiazole kinase, sugar kinase family # Organism: Streptococcus pneumoniae TIGR4 # 25 291 3 255 260 127 34.0 2e-29 MSEESPNTRISPQTQPSLHEQIADAVRTVRETTPLAQSFTNFVTINLVANAQLAAGGAAA MSFLPDDIIDTATISGADYINVGTLLPFYKDALPQVARAFHNTGHPWVLDPVAAGIGETR TAILQSFKRYPPTVIRGNASEIIALDAMWGLNEESATATASKPAGVESVDDVESAIAPAQ RLARFMARHGANGTAAVAVSGATDMVTDGEHVYRLAGGSAMMTKITGAGCSLGGVTAVYL AVAQPLIAALAATSLYNTAGEIAEKRSNGPGSFQVALLDALWNVTAEEVADRAIDMR >gi|197324945|gb|DS990229.1| GENE 432 483669 - 483896 89 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPLTKTACRHRQSCIPHTGPEKSQRNACRQRKGAITTYLQETQDTMSILGHSVEGHNAGE PAAVRELRKATRLTL >gi|197324945|gb|DS990229.1| GENE 433 484026 - 489833 9010 1935 aa, chain + ## HITS:1 COG:SPy1586 KEGG:ns NR:ns ## COG: SPy1586 COG3250 # Protein_GI_number: 15675473 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Streptococcus pyogenes M1 GAS # 60 905 50 900 1168 692 42.0 0 MAVRRLGGRIVAFAATVALSIPLGLLTNSAWAVEDATRSDSTTQMSSTPEVVYSSAVDSK QNRTSDFDANWKFMLSDSVQAQDPAFDDSAWQQVDLPHDYSITQKYSQSNEAESAYLPGG TGWYRKSFTIDRDLAGKRIAINFDGVYMNATVWFNGVKLGTHPYGYSPFSFDLTGNAKFG GENTIVVKVENRLPSSRWYSGSGIYRDVTLTVTDGVHVGNNGVAIKTPSLATQNGGNVTM NLTTKVANDTKAAANITLKQTVFPKGGKTDAAIGTVTTASKSIAAGASADVTSTITAASP KLWSIKNPNLYTVRTEVLNGGKVLDTYDTEYGFRWTGFDATSGFSLNGEKVKLKGVSMHH DQGSLGAVANRRAIERQVEILQKMGVNSIRTTHNPAAKALIDVCNEKGVLVVEEVFDMWN RSKNGNTEDYGKWFGQAIAGDNAVLGGDKDETWAKFDLTSTINRDRNAPSVIMWSLGNEM MEGISGSVSGFPATSAKLVAWTKAADSTRPMTYGDNKIKANWNESNTMGDNLTANGGVVG TNYSDGANYDKIRTTHPSWAIYGSETASAINSRGIYNRTTGGAQSSDKQLTSYDNSAVGW GAVASSAWYDVVQRDFVAGTYVWTGFDYLGEPTPWNGTGSGAVGSWPSPKNSYFGIVDTA GFPKDTYYFYQSQWNDDVHTLHILPAWNENVVAKGSGNNVPVVVYTDAAKVKLYFTPKGS TEKRLIGEKSFTKKTTAAGYTYQVYEGADKDSTAHKNMYLTWNVPWAEGTISAEAYDENN RLIPEGSTEGNASVTTTGKAAKLKADADRKTITADGKDLSYIEVDVTDANGHIVPDAANR VTFDVKGAGKLVGVDNGSSPDHDSYQADNRKAFSGKVLAIVQSTKEAGEITVTAKADGLQ SSTVKIATTAVPGTSTEKTVRSFYYSRNYYVKTGNKPILPSDVEVRYSDGTSDRQNVTWD AVSDDQIAKAGSFSVAGTVAGQKISVRVTMIDEIGALLNYSASTPVGTPAVLPGSRPAVL PDGTVTSANFAVDWTKPADTVYNTAGTVKVPGTATVFGKEFKVTATIRVQRSQVTIGSSV SGNALRLTQNIPADKQSDTLDAIKDGSTTVDANTGGGANPSAWTNWAYSKAGHNTAEITF EYATEQQLGQIVMYFFRDSNAVRFPDAGKTKIQISADGKNWTDLAATETIAAQESSDRVK PYTYDFAPVGATFVKVTVTNADTTTPSGVVCAGLTEIELKTATSKFVTNTSAALSSLTVN GTKVSDSVLAAGSYNTPAIIADVKAEGEGNASVTVLPAHDNVIRVITESEDHVTRKTFTI NLGTEQEFPADSDERDYPAADMTVTAGSEQTSGTATEGPKKFAVDGNTSTYWHSNWTPTT VNDLWIAFELQKPTKLDALRYLPRPAGSKNGSVTEYKVQVSDDGTNWTDAGSGTWTTDYG WKLAEFNQPVTTKHVRLKAVHTYADSGNDKFMSASEIRLRKAVDTTDISGATVTVPAKLT VDRVDADHPATFATKDVTVTLGDATLRYGVDYLLDYAGNTAVGKATVTVRGIDKYSGTVA KTFTIELKNAPAPEPTLTSVSVKTKPSKLTYVVGDAFDPAGLVLQLNYDDDSTGTVTWNT QTAGDFTFKPALDAKLKVTDKTVTVTYQGKSAVIDITVSQPAPTVSKTDLDKAIKAIEAK NPDSSKYTADSWKTFADAMAHAKAVIADDSATQQDVDKALKALTDAYAGLTEKTPEPAPV SKSELDKKIKAIEAEKLDGSKYTAESWKAFETALAHAKAVIASDSATQQDVDAALGALTS ARDGLTEKGEVKPDPKPEPGTVDKAALDKAVKKVEAEKLDGSKYTADSWKAFETALAHAK AVIGNANSTQFDIDNALSMLNDARAALKEKPGRIIAIIDGGALSKTGASVAIIASVAAAM LAVGAGVMALRRKRS >gi|197324945|gb|DS990229.1| GENE 434 490009 - 490263 337 84 aa, chain + ## HITS:1 COG:Cgl2226 KEGG:ns NR:ns ## COG: Cgl2226 COG0423 # Protein_GI_number: 19553476 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 4 84 5 85 461 138 76.0 3e-33 MAVSKLDEVVSLAKRRGFVFPAGEIYGGTRSAWDYGPLGVALKDNIKREWWRSMVVTRGD VVGVDTSIILPPAVWVASGHVSVF >gi|197324945|gb|DS990229.1| GENE 435 490455 - 491549 1895 364 aa, chain + ## HITS:1 COG:Cgl2226 KEGG:ns NR:ns ## COG: Cgl2226 COG0423 # Protein_GI_number: 19553476 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Glycyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 1 317 143 458 461 495 73.0 1e-140 MLRTHLGPVEDENSLHYLRPETAQGIFVDFKNVMTSSRSKPPFGIANMGKSFRNEITPGN FIFRTREFEQMEMEFFVVPGTDEEWHQYWIDTRTRWYTDLGINPENLRHYEHPKEKLSHY SKRTVDIEYKFGFQGSDWGELEGIANRTDYDLSAHSKHSGEDLSYFNQATGEKFVPYVIE PAAGLTRSLMAFLVDAYDVDEAPNTKGGVDKRTVLRLDPRLAPVKAAVLPLSKKPELQSI AHDLAADLRQHEWMIDYDEAGAIGRRYRREDEIGTPLCITVDFDTIDDQAVTIRERDTMQ QERVALDKVADYVAARVSEKRVRYPEGPVSITGTKAADGGTDVAKETGVDESAPVKVAEA GGLY >gi|197324945|gb|DS990229.1| GENE 436 491640 - 492920 460 426 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|145632364|ref|ZP_01788099.1| ribosomal protein L11 methyltransferase [Haemophilus influenzae 3655] # 52 356 30 327 353 181 36 7e-44 MYGMSRADSWGRAVTDTVEQTIAVDAHETDVLDPRTDAPAGKEPVTMAPVDLGPIHVPTP VVLSPMAGVTNWPFRVLCEEYGPDGLYVAEMITARALVARNPKALRLCRFAPSERIRSLQ LYGVNPAIVEQAARIVVDEDMADHVDLNFGCPVPKVTRRGGGSALPWKTDLFREIIQRVV KVCSAANIPVTAKIRVGIDHSHETFMEAGHIAQEEGCAAVTLHARTTAEYYGGHSDWSRI GELVGALDIPVFGNGDIWGADDALEMVRETGCAGVAIGRGCQGRPWLFADIRNAFAGSDE RVNPTLGAVCDVIMRHARLLVEFYDGDERMAVHDLRKHIAWYLKGFPVGGTTRRAFMECE NLADVERETSRLDPAITFPERVKDKPRGRVRFAKKVHLPYGWLDSRVTTHEERETLFGDD PMDAGY >gi|197324945|gb|DS990229.1| GENE 437 493069 - 494349 1460 426 aa, chain + ## HITS:1 COG:MT2209 KEGG:ns NR:ns ## COG: MT2209 COG0206 # Protein_GI_number: 15841642 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 28 319 44 335 401 315 64.0 1e-85 MVSEIAQTDNFNDRTNIKVVGVGGAGGNAVNRMIAEGLQNVQFVAINTDAKDLLRSDADV KISLNDASSRGLGAGADPERGSKAAQDHQSDIEEALKGADMVFVTCGEGGGTGTGASPIV ARAAHQQGALTIAVVTRPFTFEGPQRSASADLGIENLRKEVDALIVIPNDRLLELSDRTI GIVDAFKTADSALLAGVQGITDLITMNSYIHVDFSDVTAILRGAGTALFGIGSARGEDRA TQAAEIAISSPLLESSVEGAHGALINIAGPTDLKLQEASAATELVRKAIHPEAQIIWGLA LDDAYGDEVRVTVIAAGFDADSKNTNVPSMKGATTAASIPASHTTDPVTPTHAHDQQQPV APSIPVRTQPSANTPMTTTNPAARQVPDFALRKGGPASMPIDDETSEHDIVSSGDLGDLD IPDFLR >gi|197324945|gb|DS990229.1| GENE 438 494371 - 494841 484 156 aa, chain + ## HITS:1 COG:ML0920 KEGG:ns NR:ns ## COG: ML0920 COG1799 # Protein_GI_number: 15827440 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium leprae # 65 143 119 197 210 82 48.0 3e-16 MAGFMKNAMQYLGMADVAEDDEPMDIQDEDPGFDDDHSVTPVSQAAPSSPTSAPSRESNP FQGRVSRITTIHPKSYEDAQLVGRAIRDGVPVVLNLTGVSEAVAYRIVDFSAGVVFGVRG SIERVTPRVFLLSPAQVNIKVEEPQAPSSAHDLFAD >gi|197324945|gb|DS990229.1| GENE 439 494969 - 495250 432 93 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0512 NR:ns ## KEGG: BBIF_0512 # Name: not_defined # Def: conserved hypothetical membrane spanning protein with YGGT family # Organism: B.bifidum # Pathway: not_defined # 1 93 1 93 93 125 100.0 4e-28 MVFTIVRLVIDWIIDAYITVLFVRMILDWVSVLAPRWYPKGVVASLINVVYQLTEPPLRW LRRYIRPIPMGPIAMDVSFIVLYTALVALRILV >gi|197324945|gb|DS990229.1| GENE 440 495360 - 496661 1938 433 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0513 NR:ns ## KEGG: BBIF_0513 # Name: not_defined # Def: hypothetical protein with DivIVA domain # Organism: B.bifidum # Pathway: not_defined # 1 433 1 433 433 474 99.0 1e-132 MALLTPKDIREHTFQTVRFKEGYDVDEVDDFLDQVTETVEALGKQAVASGQATQSLPPDV AKLNSKISELTAQVQSLQSENEQLKSAAPVASKDDQAAQVAAAKLTEAEESNRALSQQNE QLKDQVDRLSGQIDQLTAQAAQASGKADVAAQLAAVQNERDQYRVSARDMSGRLQEAQQQ AASYQQQLNDAKKHLDALQQQAAQASDLARQLEESKQRENQLREQVAKVEPSTETGSLQK IAGAAAAASSEPERATAMLTLAMQLHDQYVDKGKAKAKEITEASQNKYNELVTKANDYSS RTRTEADEYNKQVHSDADAYSERTRSDADAYSVKTRQDADTYRENTQQQADNYEDEVRRR AGEYDSKTRSNADEYAQQVRDKLTTQSKVIEGNIQGLKQFEAEYRARLTEFLGQLSRQVS DTNNYSQIGKQAE >gi|197324945|gb|DS990229.1| GENE 441 496665 - 497342 668 225 aa, chain + ## HITS:1 COG:MT1591 KEGG:ns NR:ns ## COG: MT1591 COG0597 # Protein_GI_number: 15841006 # Func_class: M Cell wall/membrane/envelope biogenesis; U Intracellular trafficking, secretion, and vesicular transport # Function: Lipoprotein signal peptidase # Organism: Mycobacterium tuberculosis CDC1551 # 11 160 32 182 202 87 37.0 2e-17 MKDIQGRLRVRVAVFACVAAVALGIDQLTKMWAQQALGDGRTVPLIPGLLSLTLVHNPGA SLGLGSGSTWLISLLAVVACVVMAVLAARTISMRWTVMFAFAFAGAFGNLIDRVAYADGF LNGKVVDFLNYGWSVGNVADIYLVMAGIGVVVLIVLDVPFSRKDLDRIEHLGEDAGDVAR DGESDGTADESQDSSAMVQDASSGSSRTEVTVSSRQPDDSERSAS >gi|197324945|gb|DS990229.1| GENE 442 497339 - 498280 252 313 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|161507907|ref|YP_001577871.1| ribosomal protein large subunit [Lactobacillus helveticus DPC 4571] # 79 271 83 267 285 101 36 9e-20 MSRLVPAPDALVGSRFDVAVSKMLGISRAKAADLIESGQARVLDRAIAKSGTLLYGETVE FDIAEERHEPEPVCLDMAIAYEDDDVVVVDKPVGVAAHASAGWTGPTVLGSLLKRGVRIT SYGAPGRQGIVSRLDVGTSGLMLVCKSELAYKEMRRQFSEHEVVKTYHAMVQGNLKEDKA TIEAPIGRAKVSDFRFCVTPSGKPAVTHWDVLDRFGEATLVSVNLETGRTHQIRVHFSSI GHPLVGDPMYGANPVLAGELGLDRQWLHAMKLEFRHPRTHLWTSVESHYPADLAHALELM RARHASTGLEAAD >gi|197324945|gb|DS990229.1| GENE 443 498394 - 498717 247 107 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0516 NR:ns ## KEGG: BBIF_0516 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 107 1 107 107 170 99.0 2e-41 MTSANQPHYEDSPPITVQSAPTMPTAASAQYCSSSHNALRTLGFALLAAGTVSALAAIAC YMYLNRGVYNPADAILLLVEGVAALACVPLLAAGVVTSVVAWKKRDK >gi|197324945|gb|DS990229.1| GENE 444 498774 - 498995 164 73 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139733|ref|ZP_07801926.1| ## NR: gi|313139733|ref|ZP_07801926.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 73 24 96 96 152 100.0 1e-35 MAIYATETLFVQRNGQCGRRLPSYPHFGRVAPDSIQLSRVTCGIFAVFTDGRHSLPYMSL LYNDRVMHDETRG >gi|197324945|gb|DS990229.1| GENE 445 498998 - 499342 461 114 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0517 NR:ns ## KEGG: BBIF_0517 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 114 1 114 114 216 100.0 3e-55 MYTSLDRFRIKPGKEDLAREWFRYLNDHLAEANATMPAEGAHIESWFLHEESDGLYGYVY VIYDDNDKAVEVFKESENPLDIKHNEYMNACIDYHDYAEMKPAVALGDYSVFRR >gi|197324945|gb|DS990229.1| GENE 446 499712 - 500731 1499 339 aa, chain - ## HITS:1 COG:Cgl1082 KEGG:ns NR:ns ## COG: Cgl1082 COG2171 # Protein_GI_number: 19552332 # Func_class: E Amino acid transport and metabolism # Function: Tetrahydrodipicolinate N-succinyltransferase # Organism: Corynebacterium glutamicum # 6 339 3 297 297 281 50.0 1e-75 MTNERTAWGWGLASIDAAGNTLDVWYPQLTLGAAPEGANRPNHEFGALAQPQADARGVRR EPVFTVSSLDDPIADAADAYLRLHLLSMRLAQPNTLNLDGIFAKLTNVVWTNYGPFAVED FNARKLDVESAATSAARSFAASAGLPAAAPAATVNVLSIDKFPRMIDYVVPSGVRIGDAD RVRLGAHLSEGTTVMHAGFVNFNAGTLGVSMVEGRVSQGVVVGNGSDIGGGASIMGTLSG GGKLRNSIGEHSLLGANAGIGISLGDNCVVEAGLYVTAGTKITVWDKAKAAAGEPLDVVK GADLSGKDNILFIRNSVNGRIEARYRKTGIELNAKLHKN >gi|197324945|gb|DS990229.1| GENE 447 501114 - 502241 1415 375 aa, chain + ## HITS:1 COG:Cgl0778 KEGG:ns NR:ns ## COG: Cgl0778 COG1186 # Protein_GI_number: 19552028 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor B # Organism: Corynebacterium glutamicum # 5 370 4 367 368 397 59.0 1e-110 MAEFDFSQAIGEARSKYESIAKALDIERLKSQIATLETEAAKPGLWDDPENAQKVTSRLS AAQAQLKRLNEANRRIEDVETLVELAQEEADADSLSEAQSEIGSIAQELDDMEIQTLLDG EYDERSAVVTIRSGAGGVDAADFAQMLLRMYLRYCERNGFKAKVMDTSYAEEAGIKSATF QVDAPYAYGRLSVEGGTHRLVRISPFDNQGRRQTSFAAVEVVPLVEATDHIDIPDTDIRV DTYCSSGPGGQGVNTTYSAVRITHLPTGIVVTMQDERSQIQNRAAAMAVLQSRLLVLRHE EEAKKKKELAGDIKASWGDQMRSYVLHPYQMVKDLRTGCETSQTQAVFDGDIDAFIEAGI RWRHEQRRQAAEEEE >gi|197324945|gb|DS990229.1| GENE 448 502286 - 503710 1407 474 aa, chain + ## HITS:1 COG:MT3186 KEGG:ns NR:ns ## COG: MT3186 COG2884 # Protein_GI_number: 15842673 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase involved in cell division # Organism: Mycobacterium tuberculosis CDC1551 # 3 227 1 225 229 278 61.0 2e-74 MALIALDHVSKVYPKGTRPALDDVNLDIERGDFVFLVGASGSGKTTLLSLLLREEEATDG EIRVAGNDLRRLTNRQVPQYRRSIGFVFQDYKLLANKTVWQNVAFALEVIGTRRSAIKSL VPQVLQTVGLTGKENNYPHELSGGEQQRVAIARAYVNHPQILLADEPTGNLDPTTSLGIM EVLDAINRTGTTIVMATHNEEIVNSMRKRVIELHTGKIVRDEAQGSYDSAEFFPDSDVAS KAHEAISGQSDDSRFRPDSGSFDAQVTTIEARGEEGAVEGIEVVAKAVSGNIRNEGIARL ASSVHSGRTGRYGEAFQSVEDTLTWGKGLSLEQIAAQEEQKARAEQGGDEHSDAAAQSSD RATARGDARSAQPEDAAQPERHEPPEPPHSADDAAPHGQPETEHPQDESTSQSEQAGSAA EPGSPSDEGGETKPRRAHKLPPAPPAQPGHRDRHAGKAGSADDADGARNEEDNR >gi|197324945|gb|DS990229.1| GENE 449 503707 - 504630 1359 307 aa, chain + ## HITS:1 COG:MT3185 KEGG:ns NR:ns ## COG: MT3185 COG2177 # Protein_GI_number: 15842672 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Cell division protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 306 1 296 297 127 27.0 2e-29 MRMRFILSETWTSLRRNVSMIISVMLVTFISFVFIGASVLIQAQITKAKGDWYDKVEVVV WLCPDGTSQSASCSTGKAPTQQEIVDLEDVINNELGSDVSKITYMSREEFFKNTFLKQYP NGVYEGRTLTASDMQDSLRLKLKDPTKYQVVSEVLTGRTGVEAVVDQRQIFDPVFSVLNR ATVVTVVLAGVMVVVAIMLTATTIRMSAASRKNETEIMRLVGASNWTIRLPFILEGVVAS LLGSLLAVGALSGIVKVFVTDWLATSVQWMPFITQTTVWLTAPVLVVGAMLLSAVASAVS LRRYLKV >gi|197324945|gb|DS990229.1| GENE 450 504766 - 506256 2037 496 aa, chain + ## HITS:1 COG:SA2437_2 KEGG:ns NR:ns ## COG: SA2437_2 COG3942 # Protein_GI_number: 15928230 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 387 489 6 107 117 84 45.0 5e-16 MVKMAKRGGTFTSLALAAAMALGAGSVAVVAPPEQAAAVTEYEYQQKVSNHNSLKKQLTG VDSKLADLIISLNDLTENQIPAAQKAVQEAQQKAEQAKSLAEATTARLEAAKNDRTSLEE KIKQTGEDYDDAKDAVAQLARESFHGSDASTLMDVVTNATTTEDFVNKMQSDAAVTRSEA NAADAAATSLSTSMNRKERLTAIEDEITQLKGQADSQAASAQQAAEDAASKQSELEALRK KSDEERAQLEAQKKSLSTKEAQEAAELVSMKAEIDSWSVQNNTGSANAGTGGQQQIKPGA GSGSGSGSGSGAGSSKPGSGKPGSGSGNGSGSGNGSGSGNGSGSGGSQPGGSGQANGMNY TVPGNCYEGMPVCYGHRTGNTVGGSAYPWSQCTWYAYRRRVYYYHLPTGSYMGNGQDWAN TGRSLGYLVNRTPHVGAAMVFRAGQLGANRRYGHVAVVERVNSDGSVLISECGASLQGVA QWRTIYNAGNFQYVHY >gi|197324945|gb|DS990229.1| GENE 451 506355 - 506834 932 159 aa, chain + ## HITS:1 COG:ML0671 KEGG:ns NR:ns ## COG: ML0671 COG0691 # Protein_GI_number: 15827281 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: tmRNA-binding protein # Organism: Mycobacterium leprae # 6 151 8 152 160 141 54.0 4e-34 MAKEQGTVLIAQNRKARHDYLIEDKYEAGLVLTGTEVKSLREGRASLAEAFVSIDRRGEM WLEGANIPEYLNGTWNNHAPKRKRKLLLHAQQIVKLSRQIEAKGYTIVPLSLYFKDGRAK AEIALARGKREFDKRQALREEQDKREALRAMRYKNMRSR >gi|197324945|gb|DS990229.1| GENE 452 506878 - 507618 590 246 aa, chain + ## HITS:1 COG:Rv3300c KEGG:ns NR:ns ## COG: Rv3300c COG0564 # Protein_GI_number: 15610436 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthases, 23S RNA-specific # Organism: Mycobacterium tuberculosis H37Rv # 1 240 75 285 305 186 45.0 5e-47 MSEEPHIPFDIDVVYEDAGIIVIDKPHFLATTPRGMWYRQTALIRLREMFDEPDITPAHR LDRLTAGIVVFVRDPALRGAYQMMFQGRKVSKTYECLAPCRPTTRPRYGTVERLDPPAVF PLRRRSHITKLRGVLQAFEEPQAVNAETVIDLAAGGYPSMGGRLCHGRNGLRAYELHPLT GKTHQLRVHMNSIGLPIHGDDFYPRIVERAYDDFSTPLELVARSLRFTDPVSGEPREFIS RIPLGW >gi|197324945|gb|DS990229.1| GENE 453 507715 - 507945 140 76 aa, chain + ## HITS:1 COG:PAB7155 KEGG:ns NR:ns ## COG: PAB7155 COG1476 # Protein_GI_number: 14520844 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Pyrococcus abyssi # 1 64 1 64 73 60 48.0 1e-09 MKTRVRELRKQSKLTQQQLADLVHVSNRTIISIEKEQYSPSLMLAYRIAEVFGVTVEELC CLKENRELEDKDQEAN >gi|197324945|gb|DS990229.1| GENE 454 507950 - 508456 149 168 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSFVTAIVVLILGIACLGIAAFRGMATRFPIAGIVPLAWSVIDFFFAFTQSSIDSQAEK VTDERDRYIVMKSSRKALLITNYVIGAGEFQRRQMVFRVIGVWPLIHESEAREQIHAWLV ARIHLSQHERRAIGTPCIITKPHNHRGEQRVSEMLPRTFSSVAMYEIW >gi|197324945|gb|DS990229.1| GENE 455 508381 - 508587 158 68 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0526 NR:ns ## KEGG: BBIF_0526 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 61 14 74 87 103 83.0 3e-21 MRKTPTGVMRTLLAISGDIPLHDEVVGFCEYGVGAETTEEHEGIYQISYIATELKVRGNI SETRCSPR >gi|197324945|gb|DS990229.1| GENE 456 509207 - 510781 1235 524 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0529 NR:ns ## KEGG: BBIF_0529 # Name: not_defined # Def: hypothetical protein with DivIVA domain # Organism: B.bifidum # Pathway: not_defined # 1 524 1 524 524 741 99.0 0 MAHQDGADKGASGIARVGKRKWGYDPDQVDAFLDRAHALYESEDAHLTQQDIQNVSFDLS KGGYDITQVDAALSRLEQAVVDKQTTREITEHGRVAWKAQTEELYRQVCEHADRGTGERF ARGHDRRPSYDRKQVDRLIDQIVDKAAAGLGVDGVSEQDVRKLADLNSGAVSNVVFTQRK GKNGYDERQVDYYLNSCVQLLSRLESFARVSDYVGGGHESGGSRRSSGARSASDAGVTPL FGADNAYVYAPSPARQEAEPQSFAPANESFHALHEAEEALFSSQTADEPSVAADAQSVPP SFAPAGMSGTVVSAPASALPSTFSDGASAPEPQSSLAALSRRTGRSVSSSNVSADHAAAP APAPEIPSPAIPAAPASFAPSHAAVSDQPAAVAEPQAPERVAKSVKVSAEPVAAAPAVAP SAPAPMPVFDQPVASDAHTDASVEALPSFAPSSSPSANVPVHAVDDAAQTQSDDSHKSSS DDLFSSMYLSPESKLDFDIPDLSFPTLNTGEFYSGLRGFGKDND >gi|197324945|gb|DS990229.1| GENE 457 510839 - 512029 1169 396 aa, chain + ## HITS:1 COG:Rv2870c KEGG:ns NR:ns ## COG: Rv2870c COG0743 # Protein_GI_number: 15610007 # Func_class: I Lipid transport and metabolism # Function: 1-deoxy-D-xylulose 5-phosphate reductoisomerase # Organism: Mycobacterium tuberculosis H37Rv # 5 388 35 405 436 326 53.0 4e-89 MSQHRNTVVILGSTGSIGTQGLDVISRHPERFTVTGLAAGGAHVRLLAQQVARHHVPQVA VYDEAAVPALHEALEEVGARYTQIQAGPQAVNAIAGSGADLVLNGITGSVGLEPSIAALR AGSQLALANKESVVAGGHLLFGAQVRNDQINPVDSEHSAIWQSLRSGTHAEVSRLVVTAS GGPFRGWKRADMSDITPEQALNHPTWHMGPVVTINSSTLMNKGLEVIEASRLFDVAPDRI VVTVHPQSIVHSMVEFVDGATVCQASPPDMRLPIALGLSAPDRLGDVAAACDWTHASEWT FEPLDDEAFPAVALARECLRASEKHTAVLNAANEQAVHAFLDHRLPYLGIVDTVKEVVDA MDGELRGNPLFASVEEMGQVEREARRRADDLINSQK >gi|197324945|gb|DS990229.1| GENE 458 512057 - 513409 1511 450 aa, chain + ## HITS:1 COG:MT2936 KEGG:ns NR:ns ## COG: MT2936 COG0821 # Protein_GI_number: 15842410 # Func_class: I Lipid transport and metabolism # Function: Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis # Organism: Mycobacterium tuberculosis CDC1551 # 59 437 6 384 387 459 66.0 1e-129 MAWHSHAINQSCPGMDVVSRIIEQERPIISMSALPQTSAQTSATTGTASAVTGSFRKTGE PDISESPLHPRRKSRRIMVGPVPVGGGAPISVQSMTNTLTANVPATLQQIAELTAAGCDI VRVAVPSQDDADALPQIVAKSPIPIIADIHFQSKYVFQAIDAGCAAVRVNPGNIRKFDQV GPDICKAATDAGVSLRIGVNAGSLDKELYAKYGGPTPEALVASALKEAHMFEDVGFRDFK ISVKHHDVITMVQTYRLLASKGDWPLHLGVTEAGPAWQGTIKSCLAFGALLAEGIGDTIR VSLSAPPVEEVKVGCKLLEYMGLRKRKFDIISCPSCGRAQVDVIQLANAVTEGLKNVTAP IRVAVMGCIVNGPGEAREADLGVASGNGKGQIFIKGKVIETVPEDQIVETLLARANDIAA QMEADGQVPVGATGPVVIPIQHPNAMNAVR >gi|197324945|gb|DS990229.1| GENE 459 513677 - 515302 1802 541 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0532 NR:ns ## KEGG: BBIF_0532 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 541 1 541 541 984 99.0 0 MCTVPIFIILIGLLVFVSNATAMPWNNEPTGQTLSTLSADTGVTFDNLGGVHLAKRGEYE VSERSVWFDAKRPSTGEIQRTHVIIREPVGVSGKLPGMVFMHGAGYGSAVDSFVDMAYDL SSAGFVTAVLDKPVWSTNDITRDYTGSAAVYDEVIRMLRGLDNVDDREVGIYATSESTWV SSYLLDMDKDIAFQVLLSPMVFTPRQAIGFLAAQDFALVGAHDGYQSIVRRVFNIDSALF GVTLPDVHTLKPSAYSIPTLVAYGSKDVMTAQVEGVEAIVDMALRAGNHDVSIRGYPVAN HVLRLGDESETGTPFADQYAADVVDWAVGTAKGLRQTSERVGGVNLYQSIAVPKDLKANR GLTVYGLLLHVFMVFMMVLSLVIAVVALVVKIRAMIRRTGPALGFSHGFGNQLLTLTVTT VATLALFGAGLGQVIMGVVKIAWGGAPPEKPGLMYWSWPVIQVVCTVVVWAWSRVLARLI EVASLRGVIRFPPRKGAIGDVMTGRDPVLASTRLGRVLFWVTAVTMLSVLLMFAFWGLFV Y >gi|197324945|gb|DS990229.1| GENE 460 515367 - 516149 616 260 aa, chain + ## HITS:1 COG:MT2431 KEGG:ns NR:ns ## COG: MT2431 COG1381 # Protein_GI_number: 15841874 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Mycobacterium tuberculosis CDC1551 # 1 260 1 241 265 172 43.0 4e-43 MPLYRDEGVVLRTAKLGEADRIVTLLTRSHGKVRAVAKGVRRVKSRFGGRLEPFMRVDVL IATGRTLDVVSQVESISAYAAPICADYGAYGIANVMVETADKLVSAEGERAVAQYRLLVG GLNALARHAHPATAIGESYVLRALALAGWTPRLHSCVVCGRHVAVSPVAGESGDDGGAGE SRMSGPMFFSPSAGGLMCSTDRTPDAKRIDPDEVVQLSAAVDGDWGVLDGAPPDARVLRF VEDWGEYYLERPIRSLRLLD >gi|197324945|gb|DS990229.1| GENE 461 516154 - 516945 974 263 aa, chain + ## HITS:1 COG:MT2430 KEGG:ns NR:ns ## COG: MT2430 COG0020 # Protein_GI_number: 15841873 # Func_class: I Lipid transport and metabolism # Function: Undecaprenyl pyrophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 12 259 38 294 296 293 56.0 3e-79 MAFENVDYTSLDIPAAPFSDPARIPDFPKNKVPRHVGVIMDGNGRWAQQRGLVRTDGHQA AEPVVFDTIAGAIEAGVRYLSLYTFSTENWKRSPQEVRFLMGFSREIIHRRVAQMDDWGV RVRWSGRRPKLWKSVIDELEVAMERTKHNKVIDVVFCINYGGRAEIADACAEIAREVAAG RIKGDRVTEKMIADHLYNPDIPDCDLVIRTSGEQRTSNFLPWEAAYAELDFVPELFPDCG RDVLWRSIDHYIHRDRRFGGVKK >gi|197324945|gb|DS990229.1| GENE 462 517082 - 518056 1451 324 aa, chain - ## HITS:1 COG:DR2173_2 KEGG:ns NR:ns ## COG: DR2173_2 COG3878 # Protein_GI_number: 15807167 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Deinococcus radiodurans # 89 323 34 259 260 131 41.0 1e-30 MGLLDKLFGRDTPSQEIVGKVDKEGPRNPIDQLGVTGRSQRNAAYEDTAHIPRITDYVAE KLSQLLRYSTEMPVLRLTEDDSPAQITDSKLGGAFYVPEGMKAPRNLDTGDPLYLLAQLN FSQLPQLRGFPAQGLLQFFIDGEDTLYGADYDNPQSQRSWRVRYLPNVPVTALHANRVVK PAWHDDTVLPFNDPDTERRLVAQAGKQTITPTDYRFEGRLQSCVSTLNEYDHGFFREHEA EIRDSLAVLLMSGGHQVGGYPIFTQSDPHDDRDPLWNKATDLLLQIDSTNDVSFGDSGVA NFFISPSDLERLDFSRVLYTWDCY >gi|197324945|gb|DS990229.1| GENE 463 518195 - 518359 280 54 aa, chain - ## HITS:1 COG:no KEGG:BLJ_1363 NR:ns ## KEGG: BLJ_1363 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: Galactose metabolism [PATH:bll00052]; Starch and sucrose metabolism [PATH:bll00500]; Metabolic pathways [PATH:bll01100] # 1 54 315 390 390 84 56.0 2e-15 MYGWTSPFVEPIPMQDDGWCGQLTLPREIMLVAESGSLTVTSLTLHHLKSIGLD >gi|197324945|gb|DS990229.1| GENE 464 518501 - 518725 344 74 aa, chain - ## HITS:1 COG:BS_sacC KEGG:ns NR:ns ## COG: BS_sacC COG1621 # Protein_GI_number: 16079757 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-fructosidases (levanase/invertase) # Organism: Bacillus subtilis # 35 74 49 88 677 71 65.0 3e-13 MLSAGFMAACGLGMLLIYLFRVPSEQKDELRKEADPNGLCYYKGRWHVFYQLHPYGTQWG LCHWGHVSSEDMVT >gi|197324945|gb|DS990229.1| GENE 465 518956 - 522525 5150 1189 aa, chain + ## HITS:1 COG:MT1598 KEGG:ns NR:ns ## COG: MT1598 COG0587 # Protein_GI_number: 15841014 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 4 1186 9 1182 1184 1159 49.0 0 MAGNFVQLHNHTHYSLLDGASKVPDLVKRVKELGMPAVGITDHGNMHGAYELWRAAVDSG VKPIIGIEAYVTPETARQDKTRVSWDTNWTPVPGHARNPDDVSGGGLITHLTMWAENDEG LVNLIKASSVANLEGRVMRYPRMDKEVLSTYSKGVIASSGCPSGIIQTRLRLGQFDEALR AAGEFQDIFGKDNFYIELMDHGLSIESKVTGDLLTIAKKLGAPLLATNDSHYVMEADKDA QDAMLCINSGATLDDPNRFKFEGSGYYIKSAEEMRELFKDHPDACDNTLEIAERCNVIFD DHEDGAFMPQFDCPEGWDETSLFLKKVEEGLEKRYDGNPPMEVLKQADYECGVICQMQFC GYFLVVADYINWAKEHGVMVGPGRGSAAGAMVAYAMGITELDPLKHGLIFERFLNPERVS LPDIDVDFDPEGRMRVLGYVADKYGHDKVAQCVIYGTIKTKQALKDSARIMGFPFEMGTR ITEALPPAATGGKDISVHDIFDPSAKRYAEAREYRELYDSDPEVKRITEEAKGIEGLIRQ TGVHACATIMGSAPITDTSPLLERTDGTVTTTFEYHTCETLGLVKMDFLGLSNLTVIRDT LTNIEHNGKGVIDYTKIPLDDRETYQLLSRGDTLGVFQLDSDGMRSLLKTLKPDNFNDIS ALIALYRPGPMSMDSHTNYAKRKNGLQKITPIHPELDEPLKQVLDETYGLIIYQEQVQSA ARILAGYSLGKADVLRRAMGKKKPEVLAKEKVPFFAGMKEHGYSEEAAEAIWEILVPFSG YAFNKAHSAAYGLISYWTAYLKTHYPVEFMAALLQGAATNKNKTALYLGEARRMGIQVLS PDVNESVYEYSAVGDVVRFGLGAIRNVGENAVKDIIAERETGRGKYVNFMDFIRRVPLTA LNRRLVESLIKAGAFDSIDPNRRALFTVHESAIDSVVGLKRKQAEGQFDLFSDTEDSGAD AMGDATVAVPDIEEWDKKDKLKFERDMLGLYVSDHPLSGMQAVLAGMREMSIAHLIDRAP TMPSGQQVTLAGLITNVDRRVSKKGNPWAIVTIEDMESSIQCMFFGKVYEAASTELIQDA VVQVRGQVEVRDETVSMRATEMQPVALETDDERPFLITLPLVALGRGNMQQLAQIITRHP GFCEVRLAVLDAKGNARVMTFGDRFRVKRDTSLFAEIKSLFGPSCLPTA >gi|197324945|gb|DS990229.1| GENE 466 522895 - 523737 794 280 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0538 NR:ns ## KEGG: BBIF_0538 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 7 280 2 275 275 395 97.0 1e-108 MPPVPAPAVPAAPGTAYQQQPQMAGYQQQPYRAQTYPQQPVDSQQYGQYQQSGVPGVPMA PVAPVAQKKSKKPLIIVLAIIIVAALVVGGVFLFLHLSQPGVNGTYSLSAGGNTGTLSVD GKKMSLDLPGNDDGKPAVSATIDKVTSGNGSHSYTLKDLKFSGESGNYAMSEVTGLIGYI GGLGEEQGTAVLNALSPTVTIPDGASKGEPNGTWSVSCSVMGLGMGISANFKDDGTLTMS VQATGHGESTLHGTWSKTGDAIFDISFDDPDMTMTLSLKK >gi|197324945|gb|DS990229.1| GENE 467 523828 - 524133 536 101 aa, chain - ## HITS:1 COG:CAC1261 KEGG:ns NR:ns ## COG: CAC1261 COG1534 # Protein_GI_number: 15894543 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted RNA-binding protein containing KH domain, possibly ribosomal protein # Organism: Clostridium acetobutylicum # 3 90 1 88 96 64 36.0 4e-11 MALSKKQVKQLRAMANQLNPLLYIGKNDLTDAAVKQASETMDSHELLKVAVQDGSGLTAK EAADKLAGQIGAQVVQVIGNRFVLYRKSSRNDIEHIRLIRE >gi|197324945|gb|DS990229.1| GENE 468 524321 - 526198 2475 625 aa, chain + ## HITS:1 COG:SA0102 KEGG:ns NR:ns ## COG: SA0102 COG4716 # Protein_GI_number: 15925810 # Func_class: S Function unknown # Function: Myosin-crossreactive antigen # Organism: Staphylococcus aureus N315 # 1 622 1 588 591 706 53.0 0 MYYSSGNYEAFARPKKPAGVDGKSAYIIGTGLAALSAACYLVRDAQMPGKNIHILEKDAV AGGACDGADIPGLGYVMRGGREMDNHFEVMWDLFRSIPSIETEGVSVLDEYYWLNKDDPN YSLCRATKDRGQDAGLQGKFGLSDKASMEIMKLFFTPDEELYDKPITDFFDDEVLKSNFW LYWRTMFAFENWHSALEMKLYIKRYIHHIGGLPDFSALRFTRYNQYESMILPMVKYLEAH GVQFHYNTKVENVEFAIGGGNGPERERTGVGQDTIQKIQATSGFFKRNPYGTNTKKLAVR IDIDHEGDKSSIDLTQNDLVFITNGGCVENSTMGSQHSPAAWNPDLKPGGGWDMWRRIAK QDPSFGHPDTFCSDPDATKWMSATVTTLDAEIPPYIKRICKRDPFSGRVVTGGIVTVEDS NWLMSWTLNRQQQFRDQPKDQLCVWVYGLFPDKPGNYIKKPMTECTGEEICQEWLYHMGV PTDKIEALAKSHANTVPVMMPYITAFFMPRSAGDRPDVVPDGAVNFAFLGQFAETPRDTI FTTEYSMRTGMEAVYTLLDVDRGVPEVWGSVYDVRNLLNATVKLRDGSPVTDMKLNVVER AVMKKVLKKLGKTDIGMLLREYGAI >gi|197324945|gb|DS990229.1| GENE 469 526251 - 526565 177 104 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0541 NR:ns ## KEGG: BBIF_0541 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 5 60 1 56 107 107 98.0 1e-22 MNFVMTAQDADPQQDRITLSGNRFRHIDMVLIDDFQYFAGRTALQEQLLQTLRALHQAGR YSPRYAANRSHWETCEPCGPPNEHGTLQRTGIPGLTEMFTCVVT >gi|197324945|gb|DS990229.1| GENE 470 526577 - 526675 88 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPAINLTARLNRDQTFETLALTPFREVPLSHQ >gi|197324945|gb|DS990229.1| GENE 471 526784 - 527824 1149 346 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0542 NR:ns ## KEGG: BBIF_0542 # Name: not_defined # Def: hypothetical protein with helix-turn-helix motif # Organism: B.bifidum # Pathway: not_defined # 1 346 1 346 346 704 99.0 0 MAASSALPTAQIVIEILEQLIKHTDPEHGLTAAEISKRINVSDKTVRGHLKALQSMTPFD RHVGHLDRRDLVNAESANPRPGWYIEPVFDIAQMRLLVDGAALSSSDGEYLRELIAKIYT FAGKSGQLRGLEQLTTPKNYNTEFLNNIEILNDAIAYGRVIRFRYCTYDVNGNLVPRRNG DGDIKTYLADPYHLMYKNSKYYLLCHMHRYDSLSYLHVERIRDLSIEGPDHSLKRTLDSF SPTPGQPFDIVRHMNERPYPMDGKATPIHMKIHGALEPLYDWFADADVVQTGEREYDVHV VANEHATLWWALQYADSHIIEILSPASLRKMLHDTGEYLVSTYAQQ >gi|197324945|gb|DS990229.1| GENE 472 527964 - 528791 1080 275 aa, chain - ## HITS:1 COG:lin0819 KEGG:ns NR:ns ## COG: lin0819 COG0656 # Protein_GI_number: 16799893 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Listeria innocua # 1 275 1 274 274 274 48.0 2e-73 MAIQSTITLNNGTVIPQIGLGVFRTPDGDTTVNAVQAALENGYRHIDTAMIYRNETSVGE GIRRSGVPRGDLFVTTKLWNDDIRAHRGKEAFQESLDRLGMDYVDLYLIHWPADVWQQAW DDLQEIYASGRAKAIGVSNFQPHHLADLLKNSDVTPAVDQIESSPQFTNQPLVDELSAKG IATEAYSPLGGTGGDLLAIPELAEIGAKYGKSAAQTVIRWHIQRGVVVLPKSTHADRIRQ NIDVFDFVLSDDDMAAISAMDTGKRNSADPDNFDF >gi|197324945|gb|DS990229.1| GENE 473 529093 - 530001 1116 302 aa, chain + ## HITS:1 COG:RSc1500 KEGG:ns NR:ns ## COG: RSc1500 COG0656 # Protein_GI_number: 17546219 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Ralstonia solanacearum # 19 284 8 271 276 253 50.0 5e-67 MVSDDTTRGQQGSAEAQELTLNDKAHSVIPQIGFGTFQIPPEDTQRAVEEALEIGYRHID TAAAYYNEKEVGDALKATGMAGKVWVTTKLRNCDQGYDSTMVAFDRSRSNLGVDVVDMYL IHWPFAAAGFFKETWRALLKLRDEGAVRVPGVSNFLPQHLRALIEDSGETPAVNQIEVHP RFNQPGNRAFCAANGVAVEAYSPLGHGKDIESEPVVAAAKAHDVTPAQVVLRWHTQEGRI IIPKSKHVERMRVNLASSDFDLTSAELAAIDALDDPHGNVSADPATFMHSQSWADQHVRG NI >gi|197324945|gb|DS990229.1| GENE 474 530103 - 530525 195 140 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0545 NR:ns ## KEGG: BBIF_0545 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 140 9 148 148 258 98.0 8e-68 MDGEMERVLPDDADDGAERRWIDDTLNRLSRSSFRAKFELSAKDRAYARAKGKAVIDRHA RELLRARIGAANPRNDGRQTPWRGHPVFTAQHATATCCRGCIAKWHHLPQGRELTDVEID RLADLVMAWIERDLIRHPAV >gi|197324945|gb|DS990229.1| GENE 475 530758 - 531006 225 82 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0546 NR:ns ## KEGG: BBIF_0546 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 78 23 100 107 137 97.0 1e-31 MEKSDNYFQGKRCVVALIVAMTLLSGAGFTVSVASADTDTVGYETDRIAFSGARTVCGEG SIDFAALTRSRMFLIDGGAAWN >gi|197324945|gb|DS990229.1| GENE 476 530997 - 531215 108 72 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0522 NR:ns ## KEGG: BBPR_0522 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 72 51 122 122 143 97.0 2e-33 MELKGPDTDYQCPGGIIGFDNCSNAGYSSAEIIRPTDVKGKKKPDSSRPYLCFLAEHMNV PPADDAVYYPQE >gi|197324945|gb|DS990229.1| GENE 477 531589 - 532632 567 347 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0548 NR:ns ## KEGG: BBIF_0548 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 30 347 1 318 318 605 98.0 1e-172 MHSSTYPHFFHGSSHRQREYATVTFMNDVMLQPMGERTPMTQSLRDRAQDAIMRCAALAW RIGGNVLFGMTTALALQQVPLPEVCDLDAEMLHITSSTPDRRRRRIPGTHPHVWKLIATH PDACVPIKGNVFALHPFHAWAQLSSHVSLEELVILAEAIITAISKSSGRYPRLVLSSLRE FIDNAPYFLGKTACRTALQLVKANVLSPKESKARLILLRHGLPDAEVNCHVDRAMFDSGK PMSLDIAWKHFKVAVEYDGDHHRTDKHQWRRDRKKRDRLRQLGWTIIVITADDIRDEVAC AEFALNVARELTLRGCDVDFHVIAMTVEELARREKAADRKKRRESAV >gi|197324945|gb|DS990229.1| GENE 478 532623 - 532748 108 41 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139767|ref|ZP_07801960.1| ## NR: gi|313139767|ref|ZP_07801960.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 41 5 45 45 64 100.0 3e-09 MNAWISTAIHISDEPARFLTMWVIRRFWEDYDSVHWYDRAL >gi|197324945|gb|DS990229.1| GENE 479 532760 - 534142 1932 460 aa, chain + ## HITS:1 COG:Cgl2049 KEGG:ns NR:ns ## COG: Cgl2049 COG0141 # Protein_GI_number: 19553299 # Func_class: E Amino acid transport and metabolism # Function: Histidinol dehydrogenase # Organism: Corynebacterium glutamicum # 1 444 2 437 442 432 54.0 1e-121 MRIIDLRGKNLSRAELLAAMPRAAMGTSEATDLVRPILDDVKERGAAALRDFEEKFDHVR PEHLRVPVEAMTAALETLDPEVRAAIEESVRRARAVAANQVPKDFYTDLAEGARVAERWI PIQRVGLYVPGGKAVYPSSVIMNAVPAQAAGVESLAIATPPARDNAEGLPNKTILATCAI LGVDEVYAVGGAQAIAMFAYGAKGSEPQDGDVLCDPVDKITGPGNIFVATAKSLVSAFVG IDAVAGPTEIGIIADKTADPSLLAADLIGQAEHDELAGSVLFTDSTEIAEKVQESLNYRV PRTEHAERVHTSLSGSQSAIVLTDSLDQSIDAANAYAAEHLEIQTADADAVVPRIKNAGA IFRGPYSPVPLGDYMSGSNHVLPTGGTARFAAGLGVHTFMKPVEVIEYDEEGLKALAARI NAFAVSEDLPAHGECVLSRFVKDPYDKATLREQEKEAGLR >gi|197324945|gb|DS990229.1| GENE 480 534150 - 534290 98 46 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGLTTPSLPRRQPPSAGAMSGSNVPRTDANTTPVSGTIDGKNREQ >gi|197324945|gb|DS990229.1| GENE 481 534287 - 535462 1656 391 aa, chain + ## HITS:1 COG:Cgl2048 KEGG:ns NR:ns ## COG: Cgl2048 COG0079 # Protein_GI_number: 19553298 # Func_class: E Amino acid transport and metabolism # Function: Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase # Organism: Corynebacterium glutamicum # 11 387 7 364 366 303 45.0 3e-82 MSENNSNAIPASLPLRNDLIGEEPYGAPQLDVPVCLNVNENPYAPDPAVCDTIARRVREI APTLNRYPDREHIELRQAFSDYLARESGTRLDVDELWGANGSNEIMLQLFQAFGGPGRTA LGADPTYSMYPEYARDTFTGWKLAHRNADFTLNVDRVIEAIAEVKPSMVLLTSPNNPTGT PLPMADIERILAACETADVAGAGEGVHPILVIDEAYVEFRKPGTPSAVSLIKNHPNLAVS RTMSKAFAFAGARVGYLAASKGIIDCVRIVRMPYHLSAVTQAAALAAFEHTDEQLSRVEH LREIRESTAEWLSRQTYKGEPLEVAESGSNFLLFGGHFDDREAIFDELLRRGVLIRVVGP DGWLRMCMGTDKEMEQFRNALTEALRIVESR >gi|197324945|gb|DS990229.1| GENE 482 535600 - 536202 924 200 aa, chain + ## HITS:1 COG:Cgl2047 KEGG:ns NR:ns ## COG: Cgl2047 COG0131 # Protein_GI_number: 19553297 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate dehydratase # Organism: Corynebacterium glutamicum # 3 200 6 202 202 226 59.0 3e-59 MARTAHIVRETSESHIELSLNLDGTGKTDIDTSVPFYNHMMNALGKHSLIDLTIHAHGDT DIDVHHTVEDTAIVFGEALKQALGDKRGIRRFADATVPLDEALAKAVVDISGRPYCVCSG EPDGFEYCMIGGHFTGSLVRHVMESIAFHAGICLHMQVLAGRDPHHIAEAEFKALARALR FAVEPDPRIQGLIPSTKGAL >gi|197324945|gb|DS990229.1| GENE 483 536202 - 536915 853 237 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0552 NR:ns ## KEGG: BBIF_0552 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 18 237 19 238 238 339 99.0 5e-92 MSGNDDRHGGDDGFDDDIHFSDEELEAALDGFEKEFRDSNAAAGEPANDAAADSPADDAG AADSGQAQEADTAAAFDDELQGLLGNKAKAAVLITRVASARLLAAFCQLSDVSADCIGSE EGAVAILRNLDGDGPEVAARDLTIVVSGMSLVLAVNRADKLEATVYLQGKPGQTIAPPLL FTSTAPFVEDLLLGITDEDGLIGTGMKVEQSADLDHDQAMAVIAEHTKFGRGSSRIE >gi|197324945|gb|DS990229.1| GENE 484 536984 - 537634 782 216 aa, chain + ## HITS:1 COG:Cgl2044 KEGG:ns NR:ns ## COG: Cgl2044 COG0118 # Protein_GI_number: 19553294 # Func_class: E Amino acid transport and metabolism # Function: Glutamine amidotransferase # Organism: Corynebacterium glutamicum # 3 211 4 208 211 211 49.0 1e-54 MTSVVVFDYGFGNVRSMVRALANLGLDTTLTSDYRQALEADGMVVPGVGAFAACMTGLRE VSGDRVILDRLRAGRPVLGVCVGEQIMFERGNEHADTTEGLGLIGGTVDLLDADVVPHMG WDTVEAPSGSALLEGVENERFYFVHSYAAMSATAKDLSAEQVDLGGDEHITWCTYGRSRF VAAYERGPLSVTQFHPEKSADAGKQLLRNWVGTFSK >gi|197324945|gb|DS990229.1| GENE 485 537746 - 538471 1123 241 aa, chain + ## HITS:1 COG:ML1261 KEGG:ns NR:ns ## COG: ML1261 COG0106 # Protein_GI_number: 15827647 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase # Organism: Mycobacterium leprae # 1 241 2 244 245 264 58.0 1e-70 MSLTLLPAVDVRDGKAVRLRQGESGSETDYGSPLEAARTWVEAGAEWIHLVDLDAAFGTG NNRAQLREIVHELGDKVNIEMSGGVRDDDSLSAALEAGAARVNIGTAALENPEWTASVIK RYGDRVAIGLDVRGHTLAARGWVKEGGDLFETMKFLDSVGCSRYVVTDVARDGMMSGPNI DLLREVAERTDAKVTASGGISKLDDLRDIKILADFGVDSAILGKSLYARAFTLEEALEVA R >gi|197324945|gb|DS990229.1| GENE 486 538543 - 539988 1809 481 aa, chain - ## HITS:1 COG:XF1486 KEGG:ns NR:ns ## COG: XF1486 COG4320 # Protein_GI_number: 15838087 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Xylella fastidiosa 9a5c # 71 462 53 440 451 103 28.0 6e-22 MSENHPIIDMSWHMADTPLGQAKAGIALRKTTPLESHADWKIVSRRRDVIGLLEEQSAQR VPDLIPLRYYRMSDSAFTFYRGTALIMANDLAHTPTTGIPVQAVGDAHIGNFGMFRSPSD RLVFDINDFDETTTGPWEWDVKRLAVSVEICGRANGIKEKDRRNAVARCVHSYRDHIRQF SQMDFLDVWYDHLDVEAALDHYESTVNGKRNRTLRDAALRASVRDSDHAAAKLTYLDSGE KRLRFRSKPPELVPISELQDYADLGVLRERLDALYDSYRQSLYEDRRYVLNRYRYHDTAR KVVGVGSVGTRAWVSILTGRGLDDPLMLQMKEANESVFERFVGRSPYATHGERVVQGQKL IQSTADVLLGWASFVAEDGRPRDYYVRQFWNGKGSIDIDHLNALGLSDLGRMCAWCLAHA HARTGDSVAIANYLGGTDEFDQAIAAFAQAYAEQNEEDYSLFRKLIKKGELPCSKKSGAK K >gi|197324945|gb|DS990229.1| GENE 487 540095 - 541432 1791 445 aa, chain + ## HITS:1 COG:MT2280 KEGG:ns NR:ns ## COG: MT2280 COG0174 # Protein_GI_number: 15841714 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 1 442 1 444 446 562 60.0 1e-160 MDKQQEFALRTVEERDVRFIRLWFTDVLGTLKSVAIAPAELEAAFEEGLGFDGSAIEGMT RVSEDDMIVQPDPSTFQILPWRGGPQGTARMFCDILTPDGEPSLGDPRHVLKRALAKAKE KGFTFYVHPEIEFYLFENQTDWSKAPTPIDEGGYFDHVPRSPGMDFRRATVNMLEQMGIS VEYSHHEAGPGQNEIDLRYADALTTADNIMTFRTVVKEISLERGIHASFMPKPLADAPGS GMHTHLSLFEGDSNAFYEAGQEFNMSLTARQFAAGILHHAAEICAVTDQFVNSYKRLWGG AEAPSYICWGHNNRSALLRIPQYKPGKGNSARMEFRGLDPVANPYLAYSVLLAAGLDGIE QQMTLGEPTSDDVWELTDAERQAMGIEPLPDSLDAALKIMEKSDFVADVLGEHAFEYFLR NKHQEWDEYRGQVTPYELKKYLPKL >gi|197324945|gb|DS990229.1| GENE 488 541558 - 542916 1395 452 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0557 NR:ns ## KEGG: BBIF_0557 # Name: not_defined # Def: hypothetical protein with telomeric repeat-binding factor 2 domain # Organism: B.bifidum # Pathway: not_defined # 1 452 1 452 452 791 98.0 0 MGLFSRHHDDDYVSPFDVDDSPAYISIDSQTSQVDEPAYQQPKSGRISPDADRRRPAGKP AAPSPADKPGPARTGAGDAPLNLPYNGHPYRGGYGHVQSKSDRKPGGATKRQRRSWVAVI AIIVFALGSNLVSHIISTGGSSDSDDSSYSFKSPSQDSKPTRVKTGETTSFGNRKATVTI AKATTGPTDHDGHKTVIITYHWKNTGDANTTFGELAMDLQVYQSGIGLNKTYLHSRGGSS IEGYKTQSDDIKIAKGEESDATIAYQLNDATGDLYVVANQATRYHEGIVSAFKAPTSGTQ YEQVQPDDIAPAPKATEAEKRKMKRISSYSGDALVSIDDVTTGPDDYQGRHTIIVTITWV NQSEANEPLSNAAKLTVTQDGSQLEMNYYTEPPLPQGYENMSFSRSVQPGVLAKATVSYV VEDPGQPVKVRLSSTYGSNDMATKKMTPRKVE >gi|197324945|gb|DS990229.1| GENE 489 543137 - 543508 523 123 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0558 NR:ns ## KEGG: BBIF_0558 # Name: not_defined # Def: major facilitator superfamily MFS 1 # Organism: B.bifidum # Pathway: not_defined # 1 123 15 137 137 218 96.0 8e-56 MSGSAIRGRQGSERFFTLPAVTLIASSFVLGMSDFVVVGILPDIAHGLRVLEVTVGNLVS RFATHLTLIGVFLAGNILCALAPNYAVLPHYRHMAKVGFLPQFRMRAGNGRLSALRLRTI PGR >gi|197324945|gb|DS990229.1| GENE 490 543471 - 544517 1108 348 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0534 NR:ns ## KEGG: BBPR_0534 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 348 1 348 348 596 98.0 1e-169 MTTRKKQVNNTGRTGGRNGGKQRNRRPGTPAKKNIRGNNTKNTRHGTAARSAIHRPKPKA RRNTLRRWWKRAGWRRRILATAGTALAAVCAVALAWGTTSFVGQRIALVTAEERQQDLGD RYGFDPGNIISDGQFFNGYAMSRTEVQSFLDEHGSDCTGTGCLKNRTFDTTDQPDDRYCD GYDGAKGETAATIIDKSSRSCGISQKVLLTVLQKEQQLVTASKPTDFQFKAAMGLSCPDD NDCDPQYAGFFRQVYGAAHRYRYYVRHEASYGYHVGKLNFVRFHPNTSCGGANVVIGNKA TALLYIYTPYQPNEAALAAGAGEGDSCSSYGNRNFSIIYRGWFGDARH >gi|197324945|gb|DS990229.1| GENE 491 544648 - 548706 5051 1352 aa, chain - ## HITS:1 COG:PM0769 KEGG:ns NR:ns ## COG: PM0769 COG1643 # Protein_GI_number: 15602634 # Func_class: L Replication, recombination and repair # Function: HrpA-like helicases # Organism: Pasteurella multocida # 5 1352 79 1292 1304 839 38.0 0 MKFTYPSELPVSAARDDIAKAVSSSQVVIVSGQTGSGKTTQLPKILLELGRGTHGRQIVH TQPRRLAARTVAERIASEMGVHLGDEIGYQVRFTDETSPKTRLRVVTDGILLAQIQRDPQ LRQYDTIVIDEAHERSLNIDFLLGYLTALLPKRRDLKLIITSATIDSVKFQEHFEHALHE KVPVIEVSGRTYPVQVVYEPLGTAPALMRHVPGFETGAMPGEESYAELSAAPSDGGRDRG SSREPDMDMPTAVARACAELIIHSSHERGARDILVFASGERDIHEFENALRRHYGPRADD MRHPDAIEIMPLFARLSSKEQHRVFEPHTHQRIVIATNVAETSLTVPGIRYVVDPGTARI SRYSKTAKVQRLPIEPISQASADQRSGRCGRIADGIAIRLYSREDYETRPRFTEPEILRT SLGAVVLHMLSVGVARTAEDVTNFGFIDPPDMKAVSDGFNELTELKAIGRKRGEVTLTHV GRQLARIPIDVRLGRMVIEAAKSSTPDTLAAVLVIVAFLSLQDPRERPDEARDEADRIHN RYADPSSDYLTALNIWDRIFQADGEPSNNALRRICKSEYFSWLRVRQWKDLVNQLTEMCR ELKFKVGSPQPASRPDLAVRQLPINQQAAHSLCCSWDDRGIHTSMLSGLLSMMGMQIVRE PKASDFAGLKGAAKAKAIKRAQKMAKNDYQGARGTHFALFPASAVAKSTPQWVMSTELVE TSRLWARYSAAIDPAWAEPLAGQLTRTTYAEPHWSGSRGSAVATAKVLLYGLPIISDRTV QWGRINPMEARDFLIRQGLVEGDVQQRFSYDDFLARNRDILDEAAEDASRTRQVSQSVSD EDLYDFYQSVIPNDVTCVADLAKWWKREHGEHPHLLDFDPDKVERLSSAESVSLADYPDH WHALGTDGQPIDLRLSYIYDPHDPADGVTVHVPLKALSRLTPEQFTWNVPGLLDELIVGL IKSLPKSLRVQFVPAPDTARKIRAWIDDRYPALPGTGTSDGQGHAWPDLPHVFTQAAIDT VGAQIHPEVLTGELWEKLPAYLRMTFSIEQQLPAPRNTRGRRHARGPVKVLGSGKSLTAL QRQFAEQAEASARRMVEHKAEQAASQGKLVEQANLLHKAGATSESRAVMLWRGALDALRM PSERISSRWLGAEALMLASAPYPSTKALVEDLQLATVKRLLPNIDTLPDDDALADAVMGV TEVYEDTVYALAHDVIAILRAYTNVDKATSGKADLPMLSVLQSVREHIATLVFPGFIGAT PPAALPRIPKYLEANLIRLTKAKNDKNRDVRWAWEADEARQLVDKAVQRAKTEPAGPRHE ALTKQADDARWMLEEFYVSLWAQELGTAKPVS >gi|197324945|gb|DS990229.1| GENE 492 548711 - 549364 820 217 aa, chain - ## HITS:1 COG:BS_ybxB KEGG:ns NR:ns ## COG: BS_ybxB COG2813 # Protein_GI_number: 16077174 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S RNA G1207 methylase RsmC # Organism: Bacillus subtilis # 17 212 2 197 201 119 33.0 3e-27 MKTQHASDASKRDGNATEQYFAAEPSSEDVRRRMKVTLRGQDAVVEVSNGVFSGSRLDLG TSVLLREVPEPPETGTLLDLGCGWGPVSLALAFASPKADVWAVDVNERALDLTRANAKSN GCEHIHAASPEQVPADLTFDAIWSNPPIRIGKDALHDLLMTWLPRLTPAGAAYLVVQKNL GADSLIPWLATALGDDYEVSKYHSAKGYRVIEVLRNK >gi|197324945|gb|DS990229.1| GENE 493 549383 - 549613 128 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSDGFRLGTMIVKGMVSGGGLRIPMPSRALRLFENAFWRNYPVDIYRSDIAWCTMQLSGG WIPPSMAKGWDHEWCG >gi|197324945|gb|DS990229.1| GENE 494 549597 - 550526 913 309 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0537 NR:ns ## KEGG: BBPR_0537 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 309 1 309 309 566 100.0 1e-160 MSGADKLGYLIRALSRTKRKDYENYVVNAIWNRLAMDDVKPVTQQLVLWPDGRRSFVDLY FPQAMIGVECDEAYHQRQRERDREREITITDVLRQIRGEDYRALHVDVSGSYEQVERSID DCVRRIRAEIERRRQANEFTPWTEAYVDYKEFYKTRDAVSVADDVGFPRIADAVNTLCGS EYKRFQESWFVPSVMRQWYGDRYRVWFPKLAIGGKAVANGWNNRLSDDGTYIYEYNEDAD LVDPVGDGDPNDIRITFAKSADPVTRIQAYRFVGVFRRISNSEDGTRKRYQRIETVFPIH RTPCLPIHR >gi|197324945|gb|DS990229.1| GENE 495 550784 - 552286 623 500 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149914878|ref|ZP_01903407.1| 30S ribosomal protein S2 [Roseobacter sp. AzwK-3b] # 108 476 56 421 425 244 39 8e-63 MLTGVLADQSDVLLDENGDGHVGQRDAEEWEERESRNQLKHVAGLGELQDVTEVEYRKVR LERVVLVGVWSSMTTTAAQAEESLRELAALAETAGAVVCDGLLQHRYKPDSATYVGSGKA RELADIVAVNEADTIVVDDDLPPSQRRALEDATKVKVVDRTAVILDIFAQHATSREGKAQ VELAQLEYMLPRLRGWGGSLSRQAGGRAAGADAGIGSRGPGETKIEMDRRVIRSRIARLR RQIAQMAPAREVKRGSRRRYGLPTIAVVGYTNAGKSSLTNRLTGSAELVENALFATLDTA VRRARAKDGRLYAYVDTVGFVRNLPTQLIEAFKSTLEEVAEADIILHVVDGSHPDPFSQI DAVNDVLADIEGAEEIPRVVVFNKIDRIDAATRERLAALEPEASLVSAATGEGLDDLLRR IESMLPVPGVHVSALLPYDAGSLLSHVREYGNVDSVDYRADGIWIEADVDRRLAAQIVDR AIDETDGDGSDHIDAEHDVD >gi|197324945|gb|DS990229.1| GENE 496 552327 - 552479 72 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFARPLLAQCPVFGGVHFDNTLTVSTHDDVCADCRSHYRPEGKVICVTLL >gi|197324945|gb|DS990229.1| GENE 497 552478 - 553440 1411 320 aa, chain + ## HITS:1 COG:CAC0267 KEGG:ns NR:ns ## COG: CAC0267 COG0039 # Protein_GI_number: 15893559 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Clostridium acetobutylicum # 7 314 3 308 313 265 43.0 1e-70 MVDSPIKPTKLAIVGAGAVGSTLAFAAAQRGVARQIVLEDIAKEHVEAEVLDMQHGSSFY PTVSIDGSDDPEICRDADMVVITAGARQKPGQSRLDLAGATINIMKSIIPNMMKVAPNAI YMLITNPVDVVTHVCQKLSDLPTNQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGE HGDSEVPLWASATIGGVPMCDWTPLPGHEPLDAAKREEIHQEVKNAAYKIINGKGATNYA IAMSGVDIIEAILRDSNRILPVSSMLKDFHGISDVCMSVPTLLNRKGVNTAINTPVSDRE LAALKRSAETLKETAAQFGF >gi|197324945|gb|DS990229.1| GENE 498 553810 - 554748 895 312 aa, chain + ## HITS:1 COG:PA0397 KEGG:ns NR:ns ## COG: PA0397 COG1230 # Protein_GI_number: 15595594 # Func_class: P Inorganic ion transport and metabolism # Function: Co/Zn/Cd efflux system component # Organism: Pseudomonas aeruginosa # 15 298 10 286 299 169 38.0 5e-42 MPHMHGTVNEVTRGSKAHQRRLMMTLTLTGTVFVAEIVGAIITGSLALLVDAGHMLTDMS VLIASTVTAVLMRRKPNSSRTWGWARLEVLTAEAGAMILLFVGLYALIEAGMRLFGGSAE HVADSGLLLFFGILGLAANVGSIIILAGQHNDNMNMKAAFLEVVNDALGSVAVIASAVVM MLTGWDGFDAIAGGLIALLMIPRAVKLLRDALKVLLEETPDGLNLDEVRTHLENIPHVVA VHDLHASTVSTGMPMLMAHVVVEPGMSMDQAANVLSQLQDCLREHFPVSIPHTTFQLEPQ GYRSPSAEQLHS >gi|197324945|gb|DS990229.1| GENE 499 554883 - 555584 618 233 aa, chain - ## HITS:1 COG:MT2793 KEGG:ns NR:ns ## COG: MT2793 COG1974 # Protein_GI_number: 15842258 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Mycobacterium tuberculosis CDC1551 # 16 233 5 217 217 222 52.0 5e-58 MSTPAPTSKNATRQRDDALTERQHLVLDAIRKHIAEQGFAPSFREIGEAVGLKSPSSVKH QLHALERKGYLHISANKGRAIELYDSGTDSQTATVLPFPGDTEASESILASRDVPLVGRI AAGVPITAEQHIDDVMRLPQRLTGSGKLFMLEVHGDSMIDAAICDGDYVVIREQPSAVNG DIVAALLDDEATIKTFRKDNGHIWLIPHNPAYSPIDGTHAQIMGKVVSVLRRL >gi|197324945|gb|DS990229.1| GENE 500 555947 - 556231 301 94 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0567 NR:ns ## KEGG: BBIF_0567 # Name: not_defined # Def: hypothetical protein with peptidoglycan-binding LysM domain # Organism: B.bifidum # Pathway: not_defined # 1 94 33 126 126 180 97.0 2e-44 MCLTLRGKIVFSMMGALLCLCMIGLLMPQVARSVPDPSAVYSYTVQPGDTLWSYASAITP DGGDVRDTIDDLISLNHLDGVSLQVGQQLKVPIL >gi|197324945|gb|DS990229.1| GENE 501 556261 - 556842 507 193 aa, chain + ## HITS:1 COG:MT2791 KEGG:ns NR:ns ## COG: MT2791 COG1327 # Protein_GI_number: 15842256 # Func_class: K Transcription # Function: Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains # Organism: Mycobacterium tuberculosis CDC1551 # 39 190 1 152 154 173 57.0 2e-43 MSAFSNRFFGIYRRPLPDSDVTVDMGKGLCQRLRYSEVMHCPYCQNSDTKVIDTRISDDG FSIRRRRVCQICHKRFTTVESTMLLVRKRSGNVEPFDRKKVVSGVRKACQGRPINEDDLR TLGQRVEEDLRARGLAEVDSDDVGKAILAPLRELDEVAYLRFASVYQNFDGLEDFQRAID DLRKEKHIEAEQH >gi|197324945|gb|DS990229.1| GENE 502 557022 - 558221 1578 399 aa, chain - ## HITS:1 COG:VC2481 KEGG:ns NR:ns ## COG: VC2481 COG0111 # Protein_GI_number: 15642477 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Vibrio cholerae # 3 398 12 408 409 398 52.0 1e-110 MAKALLLENIHPDAAQSLRDHGFEVETRKGALGEKELIEALDGVSLLGIRSKTPVTAAVI DACPSLTAVGCFCIGTNQVDLDYAGKHGIGVFNAPYSNTRSVVELVICDIICLMRRIPAH THHMRHGLWDKSASGSHEVRGKTLGIIGYGNIGSQLSVLAEALGMRVVFYDIEEKLAMGN AHRCETLDELLEQSDAVTLHVDGRKSNTGFFGEDQFARMKQNAIFINLSRGFVADLDALK RHLDSGHLSGAAVDVFPIEPKKSGDPFDTDLADEDNMILTPHIGGSTLEAQKSIGHFVSQ RLEDYWDKGSTMLSVNLPQVTLGPCKSAARIAHLHANLPGVLARVNHVLGEENINIAAQS LGTEGELGYVVTDVSQKPSQTTLDALSHIEGTIRMRVIS >gi|197324945|gb|DS990229.1| GENE 503 558232 - 560511 2343 759 aa, chain - ## HITS:1 COG:Cgl1339 KEGG:ns NR:ns ## COG: Cgl1339 COG3973 # Protein_GI_number: 19552589 # Func_class: R General function prediction only # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 3 748 16 753 755 339 33.0 1e-92 MPGLSTQLHEEQQAVDRAYARLDALRSQTRTRLDTVRAAGSHGSPTQRTERDSFATMYED RLTQLRAMEDRLVFGRLDDVKGERRYIGRIGLSSENHEPILTDWRAEAARPFYEATPSNH GDIVMRRHITLNFRDVIGIEDEVLDVHSEQVDKASKAGTLTGEGALLASLSSRRTGKMTD IVATIQAEQDRIIRSDLNRALVVQGGPGTGKTAVALHRAAYLLYTHRRKLERSGVLVIGP STTFLRYIDQVLPSLGETGVVSRTIADLIPGIKATATDTPLAAKLKGDRRMAQVVANAIA LRERVPQDLPTVHVNGFAVRMLDTDVRAAIDQAKRTRQPHNKARETFVRTMLMALRDRYA EQLDYTPSDDELNEALTNLRLNDKVRVALNLAWLPMNGTWLIDNLWSHPLRLRALAPWLD DDGIAALTRPKGAPMTQSDVPLLDEAMELLGPDPKIAAQIAAKNAKRAQEEQFAQDTLNS VGLGSGIVSSQMLVDQMNGEGGEFIAQRAAADREWTYGHVVVDEAQELTAMDWRMLIRRC PSRSFTIVGDVAQTSALGGTRRWDRTMNRLFGERRWDLNELTINYRNPQEVSDLASDFAQ KAGLYISTVNAVRTIPDAVRRIIVDGESDTIATAASHVAQLAKQFVDADGTGRVAVIAPA HMLDPLRSTIFSTLPGTLGQHETNRLSEQHEWDAQISVGSTESVKGLEFDAVVVVQPGRI EQDAPSRLVAASDLYVAMTRPTQRLVIVRTGEDETALQL >gi|197324945|gb|DS990229.1| GENE 504 560537 - 560848 127 103 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRPFASIFGVYVPSNSGGRAIGSGCAEGFVAFWTCESSANVPPPNRESGYTNPPLYPTSH HKSPRNGFFHIVLMRILHNRFGAPLRQDTSTRLRIALALHLNA >gi|197324945|gb|DS990229.1| GENE 505 560730 - 561236 664 168 aa, chain + ## HITS:1 COG:BH2576 KEGG:ns NR:ns ## COG: BH2576 COG2001 # Protein_GI_number: 15615139 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 25 163 1 139 143 132 40.0 3e-31 MADDSQVQNATNPSAQPEPMALPPLLLGTYTPKIDAKGRMALPAKLRSQLGAGLVMARGQ ERCVYLLPQSEFRRIAIQIQHTSMGDKAARDYLRVFLSGAVDQDPDKQGRVLVPQMLRDY ANLGDDIVVIGVGTRAEIWNREAWERYLNEKEQGYADIADDVLPVVGF >gi|197324945|gb|DS990229.1| GENE 506 561236 - 562348 870 370 aa, chain + ## HITS:1 COG:ML0906 KEGG:ns NR:ns ## COG: ML0906 COG0275 # Protein_GI_number: 15827426 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis # Organism: Mycobacterium leprae # 8 314 42 355 372 229 44.0 6e-60 MTDYASIHQPVLLEQCVSLVAPALQDPGSIAVDCTLGLAGHTIAFLKAAPQARVLGIDRD AEALAMATERIAGEGLSDRFIPVHAAFDAFGQVLDDQGIDRVNAVFMDLGLSSLQIDETD RGFSYAHDAPLDMRMDVSQPLTAQRVLAEYPERELVRIFRAYGEERFSRQIAREIVRRRA QEPLTTSAQLNRLVDEVVPQAHRPAGNPAKRVFQALRIEVNGELDKLAGTLPQIACRLAP NGRLVVESYHSLEDKTVKSFMNEGLRVDAPADMPVVPDDAQPFFAPLTRGAVQAGPDEIA ANPRSASVRLRGVELVRPLPARWRQRFRQDAQVARDHESARDAGENHGRHGGRGRHDDMT ARNTTSRRRG >gi|197324945|gb|DS990229.1| GENE 507 562348 - 562818 669 156 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0573 NR:ns ## KEGG: BBIF_0573 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 156 2 157 157 261 100.0 8e-69 MASTLRTARSNAAPVAPAGRGSDGAARPAARPQLHVIDGSSQRNGSRSTGSLARIIAWTQ ARGASLIHVTVAIVFLVATLLITLMLRTQMVQNSFESNTVQKNINMLTQDVQDDQAKLDE LISSLPDKAQKMGMVPQQDSVTIDLNGYKPSKGSAQ >gi|197324945|gb|DS990229.1| GENE 508 562815 - 564629 2479 604 aa, chain + ## HITS:1 COG:ML0908 KEGG:ns NR:ns ## COG: ML0908 COG0768 # Protein_GI_number: 15827428 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell division protein FtsI/penicillin-binding protein 2 # Organism: Mycobacterium leprae # 28 593 94 663 675 259 33.0 1e-68 MIGRITAMIRFARCRKFLFQCISIGVILAMVASACLFKLASIQLIDGQMAAQAATQARTK KVIVHSMRGKITDTNGTVLAQSVERYTIIADPWAASQFEPIDCDTQKAKQAGFCHKVNGK PVGVKGSAGVARLLAPVLRMDAKTLGAKLTGTSRYMILKKDVTPTVKRAIDDLNLGGVVY GELSSQRIYANGTQLGALLGGVDDSGKGVAGVESMENSALTGTDGYVIYQQGNGGEEIPG TLTGSQEAVNGSDVALTLDHDVDWYVKQALLEGQKKTKATWAMAVVQDIQTGEILALEDT DEYQAGSDQAKLNASRAVSESFEPGSVGKVITMSGLLQTGLHKATDKFTVPYSYTKDGQE YHDSSAHGDEHWTLAGIIKNSSNVGVVMASSQYTKKQRYEYLTKFGIGQSSGMSIPGESR GQLGTPESWDGRTGNTILFGQGYSVNALQLTNVVATIGNKGVRKQQSLIKSVTHADGTVE TPQEGSSTRVIDESVADQVKNAMESVAEGYSKVVNVKGYRIAAKTGTAEVAGSDGRLTSI VADFAGMIPADNPRFAITVIMKDPQGTYGGMTAGPVFAKIGEFLMQKYNVPTSSPRNDAI AVDW >gi|197324945|gb|DS990229.1| GENE 509 564692 - 565720 922 342 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0575 NR:ns ## KEGG: BBIF_0575 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 342 1 342 342 581 100.0 1e-164 MSAVSEAVARRMTLGYLADTYGLELDPDFASGVTVTSIADDVDSVAPGSLYVPAQSVDVK RLEEARARGAYAALVPPSMKHEDGPAQMPLLRARLTSRQLGDIASDIAGTPSNALAIFVV GSDDPKRSERYASCVADFLHMLGNPVGVVKSSGSTSLERELDLTYPLSILDVQQTLSVCA EDGAAAMVFALNDRTLKSDALTSVNVDVIGLDSARDLRQPTPSGTGEDSRAGEGGEAASP SGQWASGEEPAGSAGDARDDLAQARQLGAGFGFEVDEQTHVARADAQSDLLAAQAPFASD RDSIRELSLAIAMVMAAGIRRNNIRSALRVSHELAHGEENKA >gi|197324945|gb|DS990229.1| GENE 510 565738 - 567276 1346 512 aa, chain + ## HITS:1 COG:Cgl2112 KEGG:ns NR:ns ## COG: Cgl2112 COG0770 # Protein_GI_number: 19553362 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide synthase # Organism: Corynebacterium glutamicum # 1 499 2 487 514 246 42.0 9e-65 MPMTVRQVAEAVQGRLIVPQTGDGVEDGADALATSAVSDSRQVREGSVFVAIAGERVDGH DFVARAGESGAVVALVQHEVDAPVAQIVVPDTVDALGLLAKANIAARRAAGTPFTLIGIT GSVGKTTTKDLMAALLSTLGSTVAPVGSFNNEIGLPLTALKVGRDTRFFVAEMGASHVGE ITRLTTIAPPDIAVVLKVGCAHLGEFGSVERIAQAKSEIVQGLVPDGLAVLNADDAHVAA MAPLAPQGHVFWFGMAGDDAEASAGNAASGKSDALFASDVRTDDGDRPSFTLERADGGTA HVQLAIRGTHNVMNALAAASVAHLLGVPLQSIAETLSRQSRISPHRMAVSTVRRGGMSFT LIDDSFNANPDSMRAGLDGLARWRSDEDPYRIAVLGAMLELGGDESALHEGIGEYAAGLP IDAVIAVGNDDEHFDALASALAKGARKRRDDSDGNTPEVHWVHDIDQADTLVRALAGDHD DTVVLLKGSHASGLSALAQRWTTADGQPSDHE >gi|197324945|gb|DS990229.1| GENE 511 567294 - 568400 1595 368 aa, chain + ## HITS:1 COG:ML0911 KEGG:ns NR:ns ## COG: ML0911 COG0472 # Protein_GI_number: 15827431 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium leprae # 15 364 15 358 359 281 45.0 1e-75 MIALIIGILVSLLVTIAGTPMLIHLVHRLHYGQYIRQDGPKSHLVKRGTPTMGGVAIVLA IVLGWGASALYRYVRSGAVPSLSAMLVLFAMLSMGLLGFIDDFAKVRKKQNLGLSVHAKF IGQFIFATIYAVLALIIPTKSGFPSAQAGMSFIEKPFFDFRFAGGVAAAIIFVIWVNFLM TAWTNAVNLTDGLDGLASGSSMIAFAGYAIIAFWESYHIKGGTHEGFSYAVSDPLDLTII ACCAAVACFGFLWYNSNPATIFMGDTGSLALGGLFAALSIATHTEFLAIIIGGLYVIEVM SDIIQVTSFKLTHKRVFKMAPIHHHFELLGWSESKVVVRFWMIEFLFMIVGLMMFYVDWV SRSGLLFV >gi|197324945|gb|DS990229.1| GENE 512 568511 - 569941 1622 476 aa, chain + ## HITS:1 COG:Cgl2110 KEGG:ns NR:ns ## COG: Cgl2110 COG0771 # Protein_GI_number: 19553360 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramoylalanine-D-glutamate ligase # Organism: Corynebacterium glutamicum # 8 464 15 457 472 204 36.0 3e-52 MDLSDKTVLVAGLGISGRSMMEVLRSRAARVIGVDEHKPEADLHSFDDIDWDSADIVMTS PVFNPRTPFILEAQRRGIPVYSEVELAWRLRVDSARTGRPAPWVGITGTNGKTSTTEMTS AMLCADGLVAPAVGNIGKAVSHAAVDPDNDALCVELSSFQLHFTDSLALDCAAITNIADD HLDWHGGIEAYAADKSKVFRNVRRALVFNADDRRVSALASAAHTAEGCRRIGFTLGVPHP GQIGVDDGWIVDRSGVAGGAFGDETRLAPVQEFPHLCEPDGTVYPHLLADAMTALALALG MGVDLDKALAALKAFAPGGHRIQTVATAATGDGGSIRFIDDSKATNAHAARASLSSFAPK SVVWIAGGLAKGSRFEQLVADQAHTIKAAVIIGKDQKPMLEAFAASAPGIPLTVIEPEPS DTVMARAVDAAGAYAGTGDVVLMAPACASMDQFVSYADRGTQFARESSRWVTQHGK >gi|197324945|gb|DS990229.1| GENE 513 569931 - 571265 1026 444 aa, chain + ## HITS:1 COG:MT2213 KEGG:ns NR:ns ## COG: MT2213 COG0772 # Protein_GI_number: 15841646 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Bacterial cell division membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 11 439 4 417 524 182 32.0 1e-45 MASDDPRRRARSVRSGQPSRSDAGSAGAGTGTGRRTGQDSSASRLAEARRVEERDAQRLG RFTGLRSLLNPLWCYHGFRAAVVVLTGFGVIMVFSSSTVSMVSAGRSPFSQAISQGMYCV MGLVVGVVFMCLPARMYRRFSFAVVLFAMLLQLLTFTPLGVEVNGNAGWIGKRGVFTMQP AEVMKLALCIWLPAALHRAKKHSGKIGKLRACAPLTVLYLLCLGFVMLGKDLGTAMIVLF IGFVAFLLGGYPGKVLAAFAALGIIGIVGLIAYSPNRLNRVLAAYQECSGTDAQKVCYQS IHAKYALAEGGLFGVGLGNSREKWNYLPEAHNDFIFAIIGEETGFIGAAIVIILFVVLGG CMISVALQTADRYASVSLLCITVWLVGQALINIGVVVGVFPVMGVPMPFVSAGGSSLIMC LAAAGVAASLMRAQPQIKADSSRA >gi|197324945|gb|DS990229.1| GENE 514 571391 - 572560 1081 389 aa, chain + ## HITS:1 COG:ML0914 KEGG:ns NR:ns ## COG: ML0914 COG0707 # Protein_GI_number: 15827434 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase # Organism: Mycobacterium leprae # 5 389 28 391 407 246 45.0 6e-65 MSSSPVHIVLAGGGTAGHVNPLLAVADAIRRIRPEASISIIGTAVGLEHDLVPRAGYELD TIEKVPFPRRPNKAALQFPAKWMRETRKVRDILRSRHADVVVGFGGYASAPVYSAAHRMG IPVVIHEQNARAGMANKLGARYAAFIGTAYENTGLKPGSGCRMERVGLPLRPAISTLAAQ FASDRASVRQSGAEAMGIDPARPMVLVTGGSLGAVSLNRAVASSAAVLLEHAQVVHLTGK GKIDEVRSLVGERANAGVFTGVGPDSYGKGDYHAAEYLERIDLAFACADLVICRSGAGSV SELAALGLPAVYVPLPIGNGEQRFNALPVVKAGGGLMVADKDFTAQWVQSHVPSLLAEPD RLRELGDKAWEYGIRDAADTMARRVLELA >gi|197324945|gb|DS990229.1| GENE 515 572631 - 574220 1252 529 aa, chain + ## HITS:1 COG:NMA2061 KEGG:ns NR:ns ## COG: NMA2061 COG0773 # Protein_GI_number: 15794939 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate-alanine ligase # Organism: Neisseria meningitidis Z2491 # 5 517 16 500 506 266 36.0 1e-70 MSEAQTNATPIVLDPMRVAFAPDATVLQLGRTHFIGIGGAGMSVLAEMLHERGVDVDGSD REEGSKTERLRSLGITVEIGQQADNVRGADTVVYSSAIKPDNPEIVAAHERGIRIVHRSD ILALLMNGRRAVTVAGAHGKTTTSSLLSHILVHAGTGELADPSYAIGGTIQAPGGAVLDG GHAGRGDVLVAEADESDGSFCKYRPSIAVITNALADHLDHYGDEAHYCAAFIDHAGHASG HVVMTGDDEGAVAVLRDLDPSVARRTIVYATKDADQIGDLRGATLVRIDAEHESADSGRE TFTVHVPASLASVCGCGDADLALPVSLAIPGMHNARNATAAILAAMLLGVTPEAAAQAAS TFLGASRRFQVRGEENGVTVVDDYAHHPTEISALLDAARRRYPRSVIRVLFQPHLFSRTR MFVHEFAEALSKADDVIVTGIFPARELQRDFPDVSAMTIVDAAQDVPHASAQGDGTWISA VDDMQVAAQMLAMRCRPTDVVFTVGAGDITAMGAVILHALGARHNLGDR >gi|197324945|gb|DS990229.1| GENE 516 574472 - 575473 194 333 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|88856514|ref|ZP_01131171.1| 50S ribosomal protein L6 [marine actinobacterium PHSC20C1] # 99 333 35 264 266 79 28 5e-13 MTSGRKSEKALEKETSRQAKGGKTVSRKSRFGKTASRSVSSSSSRSVSRAEGFVDARRLH SEDVVKKTLDENVGVLGVATRPKVLDFDARLKERKKAGTRVAAIRVLIVILAAALVSALI WLLLFSSVFRLETSQISVSGGNEWVSEKDVLDIANQQSGKSLFLVSADKVSSQLKNIPGV TQANVVKRYPRSLEIDIKAQQPAAMLKEPDGTLVAVDRKARVLNAVGKASMKGIPVIEVS SVDNGLNSRAVKEALTILGGLPDTMRTVITKVSAKTQDSITTELSSGKYVVVWGDSSELK LKSAIVDKLLSDPSLIGDKHQIDVSAPSRPIIK >gi|197324945|gb|DS990229.1| GENE 517 575591 - 575782 239 63 aa, chain + ## HITS:1 COG:no KEGG:BAD_1097 NR:ns ## KEGG: BAD_1097 # Name: not_defined # Def: DEAD/DEAH box helicase-like # Organism: B.adolescentis # Pathway: not_defined # 1 63 38 100 100 100 84.0 2e-20 MTEPSVFYVRSLLAIWRFFCPHRCRRQLMAGISAVKVPESPCGSMIQASLLNDAQHPPKD ERE >gi|197324945|gb|DS990229.1| GENE 518 576045 - 576500 554 151 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0583 NR:ns ## KEGG: BBIF_0583 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 151 26 176 179 254 98.0 6e-67 MSGPGGKNEATGDNIRKDGTDADNADGKSAQLDSTAQPDRSGPNGGPSGHWETRPVYETQ RVQVPTGRAIFEHDWFTANVNDPAFEEHGDYLLKSGLPDNYRYEKVWQDKQIQVGTRQED HGSYQVQSIKSGTKKVRTGTKRVQTGTKRVW >gi|197324945|gb|DS990229.1| GENE 519 576619 - 577149 636 176 aa, chain + ## HITS:1 COG:L110564 KEGG:ns NR:ns ## COG: L110564 COG1490 # Protein_GI_number: 15672090 # Func_class: J Translation, ribosomal structure and biogenesis # Function: D-Tyr-tRNAtyr deacylase # Organism: Lactococcus lactis # 20 174 1 146 151 149 50.0 2e-36 MPWYAQFGCGGGGCDRIRYMKVVLQRVSQASVDVVNELGDLDPTFDLQQIGPGFLLLVGV TDEDGDDEIAWLAHKILRLRVFEDEQGKMNRSIQDIGGEILSVSQFTLFADVRKGNRPSF VGAGKPEHADIMWIKFNEALRSGGVAVREGRFGAHMRVGLVNDGPVTIVIDTADRH >gi|197324945|gb|DS990229.1| GENE 520 577366 - 578649 1936 427 aa, chain - ## HITS:1 COG:BMEII1053 KEGG:ns NR:ns ## COG: BMEII1053 COG0738 # Protein_GI_number: 17989398 # Func_class: G Carbohydrate transport and metabolism # Function: Fucose permease # Organism: Brucella melitensis # 1 413 11 407 412 87 24.0 7e-17 MSNETTKPVNAGFAKIPPVMFAFFVMGFVDLVGTATNYVKAEFGLADGTANLFTTMVFFW FLIFSVPTGILMNKIGRRKTVLWSILVTLVAMALPIIAYLLCPMKSTVQLVLIVISFAFL GIGNTLMQVSLNPLLTVFVKGDKLASTLTLGQFVKAFASLFAPWIAMWGANSISAFTYTN ADGKQVGMWWILFVIYFIVGILGYVLLAFDKIEEPAPDAGTTTIGRCFKLLFSDRIVLLC FLGIVAHVGVDVAINAQAPRILTEHTGDTFTAIASSATMVYFVARMIGCFTGGIVLQKIS NKLGVRICGVIMTLSAICFAIFTLVPTNPPVWLFWVAVALVGFGNSNVFSLFLSHALMYR PDRQNEISGLMLMGLIGGAIFPPIMGAAADVAGQFGGILVMAIGCLYVLVVGFAYRVLES GKKPVEA >gi|197324945|gb|DS990229.1| GENE 521 578718 - 579614 1324 298 aa, chain - ## HITS:1 COG:MA1840 KEGG:ns NR:ns ## COG: MA1840 COG0524 # Protein_GI_number: 20090690 # Func_class: G Carbohydrate transport and metabolism # Function: Sugar kinases, ribokinase family # Organism: Methanosarcina acetivorans str.C2A # 3 289 24 318 326 153 35.0 3e-37 MTKPIVLSLGELLWDMLPSGKRAGGAPVNFAYHAKMNGADGWSISAVGEDALGDELLAEA EKAGIHSIIQRNAWPTSTVEVSLKNGIPEYTIVKGVAWDHLLLTRQLIEVVEQADAICYG TLALRSPETHDTIIELLKHTKPGAMKFFDINLRGDHYSKELIEELLEAATVFKINDAELL LLRDMFDIRGTSDDDACRWFMSEYGLDYVILTGGSTFSTIISKNGESSTLATPHVEVVDT VGAGDSFSGTFTARTLLGDTLAEAHRKAVNTAAYVCTANGAWPEYPDTMPDYLAQAAQ >gi|197324945|gb|DS990229.1| GENE 522 579719 - 580927 1624 402 aa, chain - ## HITS:1 COG:YPO2625 KEGG:ns NR:ns ## COG: YPO2625 COG1940 # Protein_GI_number: 16122838 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Yersinia pestis # 5 395 10 409 409 164 32.0 3e-40 MTNTIANATLASVSETNRSRIMQHLYQHGISSRAQIAKALDLTPAAITKITAKLIEVGAI KETGDFEGRKNRRSIGLTLDTAEFHVIAVKFARSLVQLGVFDLAGKPLTVQELPQVTEDT IDSAIMQLHDTIGSLIEADRRIIAIGMAVPGPYLRNVGRTAVVSSMRGWQKVNFIHEFSN AFTVPVFVEQDARAGAMAQYLFDPTITTENLAYYLVGEGVGLGVIDHGNIINGALGAATE IGHVSIDINGKPCDCGNVGCLERYCSTPAIHEMILKEGDLIADAGTMTHLQACRALFALA RGGDKRAIALIKRVARYVGFGCITIFNSFNPSQIVIGDIVAEAGQLLLDEVHKVIDKHVI HELNDTTAITLSALPADAALNGAAAVAINQFLDHPSQFFELS >gi|197324945|gb|DS990229.1| GENE 523 581048 - 581905 813 285 aa, chain + ## HITS:1 COG:PM0526 KEGG:ns NR:ns ## COG: PM0526 COG3142 # Protein_GI_number: 15602391 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein involved in copper resistance # Organism: Pasteurella multocida # 42 251 1 201 244 140 38.0 2e-33 MFGVSRFVPRFARVGAWDGSGALVRDGTVIDKVCDASKEMTMTVEIAVQDVEGARIAHEE GADRVELCAALMGTGGLTPSFGMIQACSHVGVPQGIQVLIRPRGGSFVFTDEEKNVQIAD VRSAILAGASGVVVGGMTEDGRIDVPFTRALAEAARNEAVRCNRKVQVTYHRAFDMLDDQ FAALDTLIELGFTRVLTSGGAACVPDGLGRLRELSEYAAGRIQIQAGGGVTVDLIPALKE TGVSAIHLSAKRTMTSDGGPGGGGNGVMVCRTDRDVVRAAVAAAR >gi|197324945|gb|DS990229.1| GENE 524 581949 - 583088 1174 379 aa, chain - ## HITS:1 COG:BH2758 KEGG:ns NR:ns ## COG: BH2758 COG1940 # Protein_GI_number: 15615321 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Bacillus halodurans # 27 353 11 357 386 125 27.0 1e-28 MTAYQQSGIWGPHNPGQSGKASPADARRTNRSLIFSLLFPDVQLSRAELGRRTGLSRVAV SDVVNSMLSCHLLRENGRESNGGKGKRGTLLSVDPDTLHIISIDLSQPHLIQGEATNLLG EPVMHVEHALRAVNHVDFDTINEVITPLHAATQNVIGIGLAMPGVVDGNGLVKRSTLLGW RNVDVRTPIERRFSLPVTVNNDATAAMFTERLFGKGGPNMMFVRLRRGVGGAVLLGDVPV FGENHAGGEIGHISLDPQGPPCACGKRGCLERLVSATSLHARLQRSDERMRASILREAGT YLGTALSMPVGLLDLADVCVYGQSDIVNDTLLSAAQAQLDLLTGSSFHTRTIIRRCECEG EITLRGEALSVLHDYLENR >gi|197324945|gb|DS990229.1| GENE 525 583339 - 584151 1294 270 aa, chain + ## HITS:1 COG:Cgl2592 KEGG:ns NR:ns ## COG: Cgl2592 COG0363 # Protein_GI_number: 19553842 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Corynebacterium glutamicum # 3 258 2 245 253 199 47.0 6e-51 MPEVIIVKDQDEAGELYARCVADLIKGKPDAVLGLATGSSPLAAYRHLAAMVKAEDIDVS KVRGFALDEYIGLPLTHPESYHSTIHRTVVEPLGLDPEKVHVPGDVLDGAPLEDGERIAH AGPEYDAAIEAAGGIDVQILGIGTDGHIGFNEPGSSLASGTRVKTLAEQTRIDNARFFDD DINQVPTHCITQGIGTVLKARHLVLLAFGEGKAEAVEETCEGGVSAFCPASALQLHPHAT IIVDEAAASRLRHKDYYKYAFEHKPAWQGI >gi|197324945|gb|DS990229.1| GENE 526 584289 - 585545 1668 418 aa, chain + ## HITS:1 COG:lin2213 KEGG:ns NR:ns ## COG: lin2213 COG1820 # Protein_GI_number: 16801278 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetylglucosamine-6-phosphate deacetylase # Organism: Listeria innocua # 76 416 46 379 380 203 35.0 4e-52 MTQSREQIVARVTDALKGEAGRVAVRGARKVDACGVQDHFWLTAADGVIVATGTDDEAFE SACRSIGLDPADETAIIDAAGQLITPGYVDIHAHGAWEHSFDDGPEGIDIARAGHAVHGT TRQVLSLITNPIDVICANLKNVRAKMDERPDVLGAHLEGPFLALARKGAHDPECLKDPVP ELVDELLGAADGCIRQITIAPELPHGISAIKQFTKAGVVPAVGHCDADYETAKAGFDAGA GIMTHMFNAMNGLHHRKPGPIPAAVEDPRITIELINDGFHVQDPMVKLGFEFAPHRTAFV TDAMAATDCPDGPYKLGALDVNVVDGHARLVSNGAIAGSTLLLEVAVQRAVNELGISPVD AVEAATLAPARAFGYDKPNAVTGAPLGLLAPGYAADLLLTDPSSWTVNQVWCAGRKLK >gi|197324945|gb|DS990229.1| GENE 527 585815 - 587500 2651 561 aa, chain + ## HITS:1 COG:PAE2391 KEGG:ns NR:ns ## COG: PAE2391 COG0747 # Protein_GI_number: 18313310 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Pyrobaculum aerophilum # 54 561 48 530 530 272 34.0 1e-72 MVTVPMKTARRVVKEEVFPLKNHRKILAAVASIAAIASLTACGGVKDANTASGSAITIGT TDKITSVDPAGSYDNGSYAVQIQIFPFLYAQDYNTSELSPDIAADDGTWNDDGTEFTVKI KEGLKFANGHDLTASDVKFSYDRIKTINDANGPSSLLANVESVEAPDDTTVVFKDSVPFD VTLKQVMSSPAGPIVDEEVFDADKLTDADTIVKGNAFAGPYKLTAFKMNETASYEKNDSY KGLTPAKNDAIQVKYFADASNLKLNVQQGQIDVAFRSLTPTDIEDLSKDSKVKVVKGPGG EERFLTFNFKIQPYGESQSDADANKAKAVRQAVANLIDRDELSKKVYKGTYTPMYSFIPD GLSGHDDTLKATYGDGEGKPDAAKAKKVLEDAGVSTPVDLKLQYNGDHYGSSSADEYAAI KSQLEADGLFKVDLQQTEWTQYNKERVVTEDSDGSYPVYQLGWFPDYSDPDNYLSPFFRD GNFVNNGYSNKEVNDLIVKQAGEKDATKREEILKQVQALETEDLSTIPLLQGAQVAVTGT NIKGVVLDASFRFRYASVTKS >gi|197324945|gb|DS990229.1| GENE 528 587656 - 588744 1552 362 aa, chain + ## HITS:1 COG:TM1149 KEGG:ns NR:ns ## COG: TM1149 COG0601 # Protein_GI_number: 15643906 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Thermotoga maritima # 29 362 6 335 335 262 45.0 8e-70 MSESATASAPAKTQPKAKKNRLSSGFFRFVLTRFLLIIPTVFILVTIVFFVMRATGDPIS AAMGGRLTPEELQRRIHAAGYDRPLVVQYLDYLGGLLRGDLGTTLTDNQPVTTILTRYGA ATFELAFLSLIVALIVGIGLGRLAARRRDHAADAGIRVFAILCYATPVFFLGLMLKLVFA VWLNVLPPSGRSSFASDMQFQRLVSPTGFYIIDAFQLGDMSVLVDVLRHAVLPALALGLL TAGVFIRLVRTNVISTYTSGYVEAARSRGVSEGRLLSKHAWRPAMIPIITVMGMQIALML AGAVLTETTFEWKGLGFMLSQYLKQRDFVAVQGIVILIAVIVAVVNFIVDVISALIDPRV RY >gi|197324945|gb|DS990229.1| GENE 529 588746 - 589897 1744 383 aa, chain + ## HITS:1 COG:AF1769 KEGG:ns NR:ns ## COG: AF1769 COG1173 # Protein_GI_number: 11499358 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Archaeoglobus fulgidus # 46 322 21 283 286 201 43.0 1e-51 MTESTATKVGVPGDKRLGDLKVNKPVPWYGKLPVVRDLKIAVGWQKAMLVTGLVITGVFL LVAVFAPLIAPYGYSQIKDADGVSFPTQAAPSSKHIWGTTVGGFDVFSRTVWGARTAVIA IIVAVLLSIFAGVLLGLISGYFGGWVDRVLVVIADAIYSFPSLLLAILMAIMISGGQSGL WSGILASGISITVVYIPQYFRTIRAEVVRIKGSAYVESAKVVGASTWRIMTKHLLKNSTR TLPVILTLNSSEAILTLAGLGFLGFGIEPTSAAEWGYDLNRSVADVTAGIWWTAVFPGIA IVLIVLGITLVGESLNDLADPRLRARKSAGEVIGSIEDTSVDPSEKPSADNEVIAELRSE GKPQVSVENPAIAQVMEKETDHE >gi|197324945|gb|DS990229.1| GENE 530 589890 - 591623 756 577 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 14 557 8 528 563 295 33 3e-78 MSDSTNVKDTSGNLAEIENLSVSFMTDAGSIKAIDKVNFTIPRKTVVGVVGESGSGKSVT ARSIIKLLPETATTSGAIYLSNRADSERLDVLSLSGEDLRRMRGSEAAMVFQEPNSVLNP VYTIGWQIEEGLRAHGMKDKKERRAKAIDILKKVGIPEAETRIDYYPHQFSGGQKQRIVI AMALVLNPGLILADEPTTALDVTVQAEILDLLRLARDEFDASVLIITHNMGVIADIADQV VVMYRGHVVEQGDVESIFYHPSHPYTQRLLAAVPRIGQKLVVRDVDGKPIDRTSDWHDEP LAVEAKGLTITYPGHLMQPDFVAVDGIDFAIHRSEVLGLVGESGSGKSTTGRAIAGLQKV SGGSLNVLGVEMNGVRERDFKPKRADIGFVFQDPGSSFNPLMTIAENVAEPLIVHRKYSS VADAKEYVGDLLEMVQLPRAYMSRFPHELSGGQRQRASLARALALKPSLLIADEPTSALD VSVQAKVLELFKKLQVEIGFACLFITHDLAVVDMLADRIMVMHKGRIVEHGDADDIMQRP SNQYTKKLLASLPVPDPREQQKHRAHLHELLAAENAA >gi|197324945|gb|DS990229.1| GENE 531 591792 - 593390 2370 532 aa, chain + ## HITS:1 COG:HI0816 KEGG:ns NR:ns ## COG: HI0816 COG0006 # Protein_GI_number: 16272757 # Func_class: E Amino acid transport and metabolism # Function: Xaa-Pro aminopeptidase # Organism: Haemophilus influenzae # 61 523 9 428 430 195 31.0 2e-49 MSEVITEKDKEYEAREEANAPGADQAMSDRVNNRSLRPNSSAFIDFMKTGWDASEPEIEP LESSKFTPARLAALGKAFPGERLVIPAGSPKVRNNDCDYMFRPDTTFAYYTGLGQDYEAG AVLVLNPLDPDSPEAKAGKTHEAELFVAPRADTATQDFFMNAHYGEYWVGPRAGLKEMTA MTGIETHDIAQLADALSKDVGAEAGAVRVRVISDADPQVTSLVESIREANGYADPDKNNA ADDKLHEFAAEARMVKDEYEIGEMRKAVQATKHGFDHILAKLPEALDKPRSERILEGAFN AVAREEGNALGYDTIIASGEHAPILHWMRNTGVVRKGDMLLIDAGVEVNSLYTADITRTF PTNGKFTDFQRRLYQAVLDSQQAGFEAAKPGATYSDIHHACMRVIAQRLHDWGLLPVDVE ESLSPEGQQHRRWLACGVAHHLGLDVHDCAQARYESYQGAKIEPGMIFTIEPGLYFREDD LLIPPEYRGIGIRIEDDVLMTENGPEWISAGIPKQPDDVEQWMADMAAGSKA >gi|197324945|gb|DS990229.1| GENE 532 593464 - 593985 675 173 aa, chain + ## HITS:1 COG:Cgl2168 KEGG:ns NR:ns ## COG: Cgl2168 COG0494 # Protein_GI_number: 19553418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 1 136 1 143 178 116 44.0 3e-26 MPTPEFVLELRKKIGHDLLWLNGVTGCVLDDRGRLLLGRRSDTGEWAMVYGINEPGEQPA DTVVREIKEETGIDAVVTDLVAVTSSSRVITYANGDNTMYMDHSFLCALKPGGNAEPYVG DEESLNVGWFELDDLPEPLAASTVERLKLFRRYLDNKRRGDAHAMFVADGVQR >gi|197324945|gb|DS990229.1| GENE 533 594167 - 594268 112 33 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRAIILSGVAFIATTAVLALACPAHELADMEDE >gi|197324945|gb|DS990229.1| GENE 534 594542 - 596182 2092 546 aa, chain + ## HITS:1 COG:ML1471 KEGG:ns NR:ns ## COG: ML1471 COG0285 # Protein_GI_number: 15827773 # Func_class: H Coenzyme transport and metabolism # Function: Folylpolyglutamate synthase # Organism: Mycobacterium leprae # 12 456 27 480 485 301 41.0 2e-81 MSFEHPNRNNESIRDVERDIMRRPPEHNTTNLDLDRMNLMLDVLGHPEHSFRVIHVTGTN GKGSTARMAEALCRAYGLRTGLYTSPHLERINERIAIDGQELSDDDFVDMWDQIKDLVAI VDAKMAESGRPPMSFFEVLTSMAIWKFADAPVDVAVVEVGMGGLWDATNVLDADAAIIGP VDMDHMQWLGDTVEQIATEKAGIIKPNCTAIIGPQPHEERVMPILMEAAERNHATLIRDG YEMEVTDRVPAVGGQIATLHTPNGVYEQVPIAKFGEHQAHNALAALAAAEAVIPVNGPLN GDLVGQALQGVKVPGRIEQIRTSPTIILDGGHNVNAAEALRKAIEESYDFTQLVGVVAMM GDKQVEEYLGVLEPILSQVVVTENSWRDRVMPAEELEKIAVQVFGRDRVIREDSLPDAIQ KAVDMVDVEDETGVGYGRGVLVCGSFVTAGDARTLLKERMNADLAKPKAERVNPSVGEPE PRTGAGDPARSGVESDADTDFATDANPDFNENDFGDFGFDKAAKEAAKEAAKEADAADGG PKGGQA >gi|197324945|gb|DS990229.1| GENE 535 596188 - 599850 3830 1220 aa, chain + ## HITS:1 COG:ML1629 KEGG:ns NR:ns ## COG: ML1629 COG1196 # Protein_GI_number: 15827858 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Chromosome segregation ATPases # Organism: Mycobacterium leprae # 1 1218 1 1190 1203 614 37.0 1e-175 MYLKELTLRGFKSFASATTLRFEPGITAVVGPNGSGKSNIVDALTWVMGEQGAKNLRGTS MEDVIFAGTSSRPPLGRAQVSLTIDNTDHTLNIDYSEVTISRTIFRNGGSEYAINGSACR LLDIQELLSDTGLGQQMHVIVGQGRLDAILRADPSGHRAFIEEAAGILKHRKRKERALRK LANTETNLSRLDDLLSEIRRQLGPLGRQARISRRADSIQVTLRDAQSRLYADDAVAAMAK RDAVRGELASVRHDLQAAQSELVRVKVRIEQIESLSAQSSPALARINQTWHEMSQIQERL KSLCSLAGERGRSLLGQLVTSLGEDPDMLNKRAEELESQARRQSETVNDMRIALDKAIQE RADDEKKLASVRQTLAELRKSAQQRDLQIANLNALITREEAAAELADTRAKDFTAQRETL QTQLSQARSQCESLEREADNGDDDGGKALEQARADLAKRQEALDDALARQRDVDGSIITL QAKADALRDTLESRNASGALEQDDQVAAMGRLADFIHVEEGWEEAIAHALDAFSGAIVVP GERNLLHALRKAKQDRLGKAVLVMSDAAESGAGALEQVAVAEENDGSPYRTPCAAGTMVS ANPDAPDPSRAAGVVGAVRLLLNDVVAVETMDEGVRMVRDGGWAQAITRDGEVVNPVGAV GGSSLSQSDLSLAARRDKALKRITVLQGQLDDITRQVGEARQRRDQGRVLVDKESQRRIQ AKLKSEQAAKALQSAESRMKGVERQVAAIEEKLRGSVEERRSHQLKLDDLRRALAAIRDS GAEHADVDELGEREHRLEAALNATREHEVTAKIAWTEAERKVESFKRQAGLLRDNAAEAA QRRARIEAMNERRKAQAAHAQRIADDAAQVASLVAASIDDVIAKREALQAEASSHDAELK TLRAQRDGIEPKVAGLQRREHELDVDRERLAGEFGQLTQKVSDDLGLSIDELTRDFGPER PVPVLDENGRPVPRADASEPESESEPGSESDGGDDPSRFETVPYDRAEQRKRLEKAKRDL AALGKVNPLAGEEYDALETRNQYLNDQRNDVVKSRDDLMKLIRDLDSTMVSVFKSAFDDT AAAFEKMFATLFPGGTGRLRLDDPDDLLATGVIVEASPAGKRVKQLSLLSGGERSLTALA LLFAIFTARPSPFYVMDEVEAALDDVNLTRLINAFNELREHAQLIIITHQQRTMSIADAL YGITMRSDGVTAVVSQKLSR >gi|197324945|gb|DS990229.1| GENE 536 600024 - 600716 973 230 aa, chain - ## HITS:1 COG:L92665 KEGG:ns NR:ns ## COG: L92665 COG1794 # Protein_GI_number: 15674208 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Aspartate racemase # Organism: Lactococcus lactis # 1 223 11 229 240 199 46.0 3e-51 MGTLATESYIRLVNRETHAHSDQEFLDYVVFNDAAVPDRTAFIIGQSDDDPFPIIADDID KATAMGASFIVLTCNTAHYFYDHFQSLTPVPILHMPRGAVAHMAGQYPKERFHRVGFLGT MGSRASGVYRQAVEEAGYTFVEPDDELQERITSLIYDDVKGTGDLNLQRYESVLQAMLDP AGTCRCDTLMLGCTELSVLNEAFPLPQLPIIDAQAVLVEDTVSRAKAIRR >gi|197324945|gb|DS990229.1| GENE 537 600775 - 601959 1691 394 aa, chain - ## HITS:1 COG:L93420 KEGG:ns NR:ns ## COG: L93420 COG3919 # Protein_GI_number: 15674209 # Func_class: R General function prediction only # Function: Predicted ATP-grasp enzyme # Organism: Lactococcus lactis # 1 392 21 408 408 337 46.0 2e-92 MARAFHSAYGLKSLVYGRMQLSVTKFSSIMEPTFFADFTEPESFRRHMVEAGRRLTSERP DTTFLLIACGDDYSELLSRYKDELKPYFTFVSVDADLHDRLSNKTSFYELCAQYDLPHPL TFVLDKAGAAAGKYHDLPFGFPVAVKPANSVEYLHVDFPGRKKAFILHTPEELAHVVSAI YGAGYGSELIIQDFIPGSDANMRVLNAYVDHDHHVRMMVLGHVLLADPTPEAIGNYAAII PDYNEGFCLKIKSFLESIGYEGVANFDIKFDPRDGEYKLFEINLRQGRTNFFVTLNGFNL AEYFVDDLVLGNPMEGDTVIGRGDSMLLEVPFSTLKKYAEPGEALDRGIALHNAGKSGWT LRYGRDLSFRRRLLLWRLHRLTAKNYDTYLGKND >gi|197324945|gb|DS990229.1| GENE 538 602189 - 603394 1113 401 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0603 NR:ns ## KEGG: BBIF_0603 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 401 1 401 401 744 99.0 0 MEETTARGFAELREALASRTGTWPEDWFPVFKARYGMQVAFDAVRSVRGDGSVLTQLFTC CTAVDPIVVSGLRPRYADVGADTMGIDVAKVESMPLGSDEQVHAMVMQHTFGAIDEDSSR RLAALAGQMGALLVEDCAHCVTRMARDAAGWPLADISVHSFGVEKMLPTRFGGAIWVNPR LRERDAALDAETRGRLAALEQPSHHLDTVTKLYINENRVLSRLGGFGGRMRERLTASGWY EPPISDKERRGALEYEPMTVTPWIAQQAVAGISALDANENGRRAVVTMYREAFAGVDGLD VPAVAMDGEAQPLLRFPLFARDTEAAERIIAAARQAGGYAERWYRPELFPGVTDPAAYGL DTLDRSTVPVSDRLVSTALCLPTELGEDAVHRVIDAVRAAV >gi|197324945|gb|DS990229.1| GENE 539 603471 - 604469 1393 332 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0580 NR:ns ## KEGG: BBPR_0580 # Name: not_defined # Def: cell wall biosynthesis-associated protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 332 1 332 332 678 99.0 0 MITLQKTDYQQMEQAAADAGVTLPIEQTDVWARFQADIPGRTPWGVYLIQRDGETVAFIA FIDMETHGYHYLRSMHGPVWIVKPDEALEREAIDAIAAEVHRADRHVAFIRIDTWFTDGT VPVLSTVPYDQTVVIDVTGGDDAILSRMKRRGRRDVRKSLRECPADIADETKQAIADFAE YYDVMVETGKRDGFTPAPITDYSDMIEALGADHCRVFAARIEGRVVAWSIVTVNGTHAVR YYAGMRNDVMRLHVTDKLLYTECCILGSQGITEYDLMGIGSELAPSLNGLNEFKCKFTEE ITPVAAGRDVPIKKAFYSSLKLAKSLKNTLKK >gi|197324945|gb|DS990229.1| GENE 540 604514 - 606073 2170 519 aa, chain - ## HITS:1 COG:SP1530 KEGG:ns NR:ns ## COG: SP1530 COG0769 # Protein_GI_number: 15901375 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Streptococcus pneumoniae TIGR4 # 3 515 2 478 481 293 38.0 6e-79 MTVTLASAAQLLKRHGLLREIIRADRWTLDAHDIEGADTAFSAITYDTRDVREGTLLCCK GRFKAEYLHDIDERGLAAYVADTDFSAETGAPGLIVNDARKAMSLLSAEFYGRPQDELTV VGITGTKGKTTTAYFTQAVLNAHSHGKAALFSSVDNCLDGHTYVESDLTTPESMDAFRMM REAADNGMKYLVMEVSSQAYKVERVYGLTFDVATFLNISPDHISPIEHPTFEDYLYCKRQ IVRNSRALVLGAASDHADLLRQDAADAGVPVTTFELLDGQSPAGSDAADVTASPANAEHS AYRIAADGADLGEFRLALDGDFNYANAAAALAIAHAAGIDLTADAAATHAMEPVRIAGRM EQFHDPQSNTLAIVDYAHNYASVTALLDFVDERFGSQHPRITLVTGSAGNKAYDRRKEIV EAAQHRIDSFIFTAEDTDTEPFIDICTEMQRYITVPGIASTVISDRPTAVTNAIYDARAH ADRFNIILIIGKGDERWIKDHNKHVPFEGDDRIVERMFA >gi|197324945|gb|DS990229.1| GENE 541 606219 - 606926 616 235 aa, chain + ## HITS:1 COG:MT3320 KEGG:ns NR:ns ## COG: MT3320 COG1595 # Protein_GI_number: 15842811 # Func_class: K Transcription # Function: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog # Organism: Mycobacterium tuberculosis CDC1551 # 9 196 88 273 284 135 41.0 6e-32 MTDEQQPNETTAQARARFEKLAMPAVNALYRQAMKLTNNPDDAQDLVQDTFERGFKAFDS FEDGSNFEAWMTTIERNAYFNQYAKAKRRPQRANDSTGEYDDWDIYAASEHSSEGLKSAE QEYLDAFAPQEIMAALAKLPPERRQVFIDAAIDGKSYQQVADEQGVKIGTVMSRLNRART QLKRELSSYALAHGYGDARKQLPSSPSANSRSPVSVHNGDDGMRSVATSERSRRE >gi|197324945|gb|DS990229.1| GENE 542 607024 - 607287 140 87 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0583 NR:ns ## KEGG: BBPR_0583 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 87 36 122 122 157 100.0 1e-37 MPGDMGDDLVGDCFDPDSCCDEHEKAMIAALRAYLRPEVAPECLLARLRDTLDRCCCEDG GNAAGAVDEPGRSAQPAQPVRGAAVVS >gi|197324945|gb|DS990229.1| GENE 543 607481 - 607555 198 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGMRGRKRKDRRKKAANHGKRPNA >gi|197324945|gb|DS990229.1| GENE 544 607662 - 608630 1138 322 aa, chain - ## HITS:1 COG:ECs4802 KEGG:ns NR:ns ## COG: ECs4802 COG2017 # Protein_GI_number: 15834056 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose mutarotase and related enzymes # Organism: Escherichia coli O157:H7 # 11 310 9 288 300 116 27.0 7e-26 MEQAMGTTPRTGNQYSIHHGDFSAVVCELGSKLRRFDYGGKEVFCSYGPDDLTPTCCGYI LAPWPNRIKDGEYDFNCKHYCAPVNEYHPEPRNNANHGYAYQYMWKLESLTENSVTQSLR FPNLDGYPFDVTVTATYELNDKGMTVTVSARNDGDEPAPWALGLHPWVANGKNGETSEQR DADSAACRLKIDADTHVTVDAGLVPNGTEPVDGTKFDLRDDPVLDGRAFDDAWVDVHRAD DGTTTTVFTRPDGMEIKLVGDETINAWQCYTATGAPFDQHPNGIAVEPMTAPANAFRSGD HLTVIEPGKSVTTVVRYEVTVK >gi|197324945|gb|DS990229.1| GENE 545 608725 - 608916 57 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRIARSTPAQNPRGSASTMRFAISSSSCSQWPPCGITQSQRLSVAKAHARVRPEHPYTCD TGT >gi|197324945|gb|DS990229.1| GENE 546 608849 - 609838 380 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229229955|ref|ZP_04354520.1| SSU ribosomal protein S1P; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Desulfotomaculum acetoxidans DSM 771] # 4 320 2 297 676 150 31 1e-34 MAKRIVLADPRGFCAGVDRAILTVQTILKAASARVDGLPPVYVRRQIVHNRHVVEDLAAQ GAVFVQELAEIPDEAAAAGIPIVFSAHGVSPQVKAEAARRGMHVVDATCPLVSKVHREVL RFVREGYEIIYIGHRGHDEAVGVVGEDPVHVHLIEHEADVDSLDFRPEQKLVLLTQTTLS IDETAGTIAALKCRFPWMKEPPSSDICYATSNRQAAVKLVAEQSDSVVIVGSANSSNSVR LMEVAQGALGERGRAHRVDDANELDPSWFDGVEAVGVSSGASVPDELVAGVIEALRAQGF TDVSTVETIKENMHFVLPAELRRKPSQAR >gi|197324945|gb|DS990229.1| GENE 547 609899 - 610114 222 71 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0610 NR:ns ## KEGG: BBIF_0610 # Name: apuB # Def: amylopullulanase # Organism: B.bifidum # Pathway: not_defined # 1 71 3 73 73 67 91.0 1e-10 MFNANDGAATVLGIAAGECSILAVDGKVTLTGGSAVNVDADGYAAAGLSATGAPVGAVAL ADRSRVLAATP >gi|197324945|gb|DS990229.1| GENE 548 610258 - 610776 724 172 aa, chain + ## HITS:1 COG:YPO3088 KEGG:ns NR:ns ## COG: YPO3088 COG2606 # Protein_GI_number: 16123265 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Yersinia pestis # 17 170 2 156 159 130 46.0 2e-30 MENMGKKSKHEKGAGSTPATVQLEKAGVPFKTYEYEHSNDHMDDGYGVEAAKKLGFDEHQ VFKTLMADTGSERVVGVVPVSGHMDLKALAAAVGAKKASMADPKVAMRESGYVVGGISPL GQRTHHRTVLDESALQFDEILLSGGKRGFSVGVNPHDLLKVLNAVAAPIGTW >gi|197324945|gb|DS990229.1| GENE 549 610915 - 611970 1547 351 aa, chain - ## HITS:1 COG:ECs2022 KEGG:ns NR:ns ## COG: ECs2022 COG0057 # Protein_GI_number: 15831276 # Func_class: G Carbohydrate transport and metabolism # Function: Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase # Organism: Escherichia coli O157:H7 # 4 349 3 333 333 385 58.0 1e-107 MTVKIGINGFGRIGRLAFRRIFELQARGGQAGDIEVAAINDLTTPSMLAYLLKYDSTHGT FRHDDGTPVDVTSTDDAIVVDGKEYKVYAEKDANNIPWVKNDGVEFVLECTGFYTSAEKS QAHLNAGAKKVLISAPAKDETTPTVVFGVNHEILKASDNIVSAGSCTTNSMAAMVKLLND KFGIKLGFMTTIHAYTGTQMILDGPRFPKARNNRAAAINTIPHSTGAAKAIGKVVPEVNG KLQGHAQRIQVPDGSITELTTVLNKEVTADEINAAFKEAFSNTEYYGYNEDGIVSSDIIG DTHGGVFDPTQTDVNTVDGTTMVRTVSFYDNEYGFTCNMIRTLLYFAEISE >gi|197324945|gb|DS990229.1| GENE 550 612177 - 612905 794 242 aa, chain - ## HITS:1 COG:TP0518 KEGG:ns NR:ns ## COG: TP0518 COG1564 # Protein_GI_number: 15639509 # Func_class: H Coenzyme transport and metabolism # Function: Thiamine pyrophosphokinase # Organism: Treponema pallidum # 4 140 2 150 230 68 34.0 8e-12 MAYERCVIFGAGEYYEGPAPAIEKGMLAIAADGGLDHMRAMGLSPDFVIGDFDSLSGDVP DGDRSVRLPPQKDDPDLLSALKVGWSRGAREFHIYGALGGRIDHTIANMQLMALLASHGG IGYLYGDGSIVTAIADGALEFPANHVAPRRMISVFSHSDVCHGVTIAGLKYVLEGAALAN TVVQGVSNEFVDGSAATVSVESGTLIVTFPIEVPLPAVRLRHPFGGDLGTLDTAVSSALA VR >gi|197324945|gb|DS990229.1| GENE 551 612998 - 613393 382 131 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0614 NR:ns ## KEGG: BBIF_0614 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 131 1 131 131 216 100.0 3e-55 MPIFVPPLFLLGTVTPGLNKFAADSLGNNASVVGRLSACNTVGSILGTFLPTFVTIPAVG TFVTFPIFSGPLLASAMGEVAGRFETIADPDGKPGATILTDDKAPVDGLPAPGPELVATR PVWGCGSIYKA >gi|197324945|gb|DS990229.1| GENE 552 613459 - 613617 62 52 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282676|ref|ZP_03645998.1| ## NR: gi|224282676|ref|ZP_03645998.1| hypothetical protein BbifN4_02509 [Bifidobacterium bifidum NCIMB 41171] # 1 52 1 52 52 79 100.0 6e-14 MFSEADLRRIPGMTDESMAHRTVRTAAPAIIHIRMIACLMRHAHDRAFHATG >gi|197324945|gb|DS990229.1| GENE 553 613616 - 614311 906 231 aa, chain + ## HITS:1 COG:Rv1641 KEGG:ns NR:ns ## COG: Rv1641 COG0290 # Protein_GI_number: 15608779 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 3 (IF-3) # Organism: Mycobacterium tuberculosis H37Rv # 7 184 1 179 201 189 60.0 3e-48 MRIGVIISDEPRINDEIRVSQVRLIGPNGEQVGVIATSVALNLAKEANLDLVEVAPNAKP PVAKLIDYGKFKYNEKIKAREARRNQSTAEIKEIRFRLKIDDHDFEVKKGHVVRFLNGGD KVKVTIMLRGREQSRPIGGVELLQRLAADVEEYGTVESRPKQEGRNIIMTLAPKGKKVHT QSEQRRRGDQSRAERQARQAARLAAKQEAQSQAAAASAAAIDDQDKTSETK >gi|197324945|gb|DS990229.1| GENE 554 614330 - 614524 316 64 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282678|ref|ZP_03646000.1| 50S ribosomal protein L35 [Bifidobacterium bifidum NCIMB 41171] # 1 64 1 64 64 126 100 3e-27 MPKMKTNSAASKRVRVTGSGKLMHAGSAMRHNLEHKSARKRRALKADGVLATAQSKNMKK LLGR >gi|197324945|gb|DS990229.1| GENE 555 614572 - 614955 636 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282679|ref|ZP_03646001.1| 50S ribosomal protein L20 [Bifidobacterium bifidum NCIMB 41171] # 1 127 1 127 127 249 100 3e-64 MARVKRAVNAHKKRRVVLERASGYRGQRSRLYRKAKEQLLHSFTYNFRDRKARKGDFRKL WIQRINAAVRAEGITYNRFIQGLHLAGIELDRRALAELAVSDPETFKAIVEQAKAALPED VNAPVEA >gi|197324945|gb|DS990229.1| GENE 556 615104 - 616072 991 322 aa, chain + ## HITS:1 COG:Cgl1385 KEGG:ns NR:ns ## COG: Cgl1385 COG4974 # Protein_GI_number: 19552635 # Func_class: L Replication, recombination and repair # Function: Site-specific recombinase XerD # Organism: Corynebacterium glutamicum # 8 321 6 304 304 244 47.0 2e-64 MYNGSTRLLDQFIAHISVERGLARATVRAYESDLRRYLSWLAHTRGITDPDAIGKADIEE YVAQLDSDGDSARSKARRLASIHEFHRFALAQHAVSDDVSATVKAPKSAQMLPDVLTIDE VSRLLDAIPDPHGTDAARGRAGIGALPDAVLLRDRALLEFMYATGCRVSEAVGMNLDDID IDDAHVARLTGKGSKQRLVPLGEYACRALRRYLAEGRGTLEGRAKGTPDRRAVFLNKRGR RLSRQSVWEVIKLAGERAGIDRPLHPHTLRHSFATHLIQGGADVRTVQELLGHASVTTTQ IYTHVSPETLIEAYLTSHPRAR >gi|197324945|gb|DS990229.1| GENE 557 616134 - 617153 1094 339 aa, chain + ## HITS:1 COG:Cgl1387 KEGG:ns NR:ns ## COG: Cgl1387 COG1192 # Protein_GI_number: 19552637 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 65 335 16 287 290 301 54.0 1e-81 MQQAAYSRFDGDDAGNRQGTLPIRGTYAAAPRGDDGSSAETVMVGTSGGPAHTGDDKVNG MPTDLLGREYETFPAPKPLSQHGPARIIAICNQKGGVGKTTSSINIAGALSQYGRRCLIV DFDPQGAATVGLGINANAVENTVYTALFDPSIDPHEIVQHTDFENLDIMPANIDLSAAEV QLVTEVGREQILASVLRKLRNEYDVIIVDCQPSLGLLTVNALTAADGVIIPVAAEFFALR GVALLMQSIEKVQSRINPDLQVYGVLVTMFTRTLHCEEVLQRIYEAFQDKVFHSVISRSI KLPDATVAAAPITIYAPGHKTAKEYREVSRELIARGIVA >gi|197324945|gb|DS990229.1| GENE 558 617190 - 618044 675 284 aa, chain + ## HITS:1 COG:ML1368 KEGG:ns NR:ns ## COG: ML1368 COG1354 # Protein_GI_number: 15827713 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium leprae # 22 266 10 251 268 157 41.0 3e-38 MSELTEPADGGEIGGDAAVSPGFSVELEVYSGPFDALLSMIANRRLELTEVSLSEITEEF LAYVRTLDLARNMEEASAFLDVASVLVEAKSAALLPHDQADGERDEQSLEALRERDLLFA RLLQYRAFKQAAGDFRARLAANAGRFPHPAYVDERVAAMLPELAWSLGAEDLARIAAQVF ANAPASEVSLHQLHVPLVDLRAQAAVVRDRLQALPAGGSMTFAELTRDAHRRVEVVARFL AVLVFFKQGVLQFRQAGPFETLHLRWVEDARDAGVVDIAEGDFA >gi|197324945|gb|DS990229.1| GENE 559 618141 - 618713 696 190 aa, chain + ## HITS:1 COG:Cgl1391 KEGG:ns NR:ns ## COG: Cgl1391 COG1386 # Protein_GI_number: 19552641 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing the HTH domain # Organism: Corynebacterium glutamicum # 15 185 19 189 192 141 47.0 8e-34 MDAQFTAEDFPGGLRACMEAILMVADQPQHAADLARVLGVGEQEARAALERLRSQYDEEG RGFELRHTARGWQFASRAQYEQVVSAFVTDGQTARLSQAALEALAIVAYKQPVTRAQVAA IRGVNSDGVIRSLTVRGLVREDGVDEDSRGALLVTSGLFLEHLGLESLDQLPPLAPFLPE REATNVPDGE >gi|197324945|gb|DS990229.1| GENE 560 618887 - 619699 751 270 aa, chain + ## HITS:1 COG:Cgl1046 KEGG:ns NR:ns ## COG: Cgl1046 COG1051 # Protein_GI_number: 19552296 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Corynebacterium glutamicum # 16 227 1 204 206 185 50.0 6e-47 MVGGNVSERRMQPPAVGVSVVILALGPEETASDCRDAMPSRLWLPLVRRVRQPFLGRWAL PGGDLRADRSLEQSAYHALETTTDLHPRYLEQLYTFGDPARSHGGLPMVSIVYWALVGKA EAHDFTEADNVRWFPEDELPELAFDHRQIIDYALWRLRNKIEYPDIATKLVGDTFTLRQL HHVYEAITGEAIDVANFRRRMLLSGELEDTGEKLRDGRHRPAAVYRYNPDRSRASTAPPV GPPRDAPTIEELEGQRIEDALSALMPSARA >gi|197324945|gb|DS990229.1| GENE 561 619817 - 621097 1935 426 aa, chain + ## HITS:1 COG:Cgl1045 KEGG:ns NR:ns ## COG: Cgl1045 COG0379 # Protein_GI_number: 19552295 # Func_class: H Coenzyme transport and metabolism # Function: Quinolinate synthase # Organism: Corynebacterium glutamicum # 21 426 17 416 428 546 65.0 1e-155 MSATLSALSVDEIIARLGAQSTCDAGLTQDPWHFDTTKPSYGPGASMLDKLPHNAPRQQV LPEEYRNASDEELQERIRSAKSRLGSKLLILGHFYQRDEIICHADYVGDSFQLAKNATQC PDADHIVFCGVHFMAETADILSTPEQTVTLPNLSAGCSMADMANIDQVEEAWNQLGEICG TKPDADGRQQIIPVTYMNSSAALKAFCGRNGGIVCTSSNAHAVLEWAFARGKRVLFFPDQ HLGRNTARAMGIPLSEMPLWDPYKAQGGATDPSDYAKAKMILWKGFCSVHQRFTVEQIEK ARAAFPGVKVIVHPECSMQVVDAADGTGSTAYIVKEIANAPAGSAIAVGTEINLVNRLAA QYPDKTVFCLDPVVCPCSTMYRIHPAYLAWALENIEQGNIVNRITVDDDTAREAKVALER MLQVHP >gi|197324945|gb|DS990229.1| GENE 562 621150 - 622799 1949 549 aa, chain + ## HITS:1 COG:STM2641 KEGG:ns NR:ns ## COG: STM2641 COG0029 # Protein_GI_number: 16765961 # Func_class: H Coenzyme transport and metabolism # Function: Aspartate oxidase # Organism: Salmonella typhimurium LT2 # 3 544 8 530 540 309 38.0 1e-83 MSNAEIVVVGAGVAGLSAALAVADAGQDVTLVTKADLVESNTYHAQGGIAAAVFADDDPK LHAADTMAAGHGLCEPRAVEILTREGADRVRQFAAAGVHFDRDAQGHMLRGLEAAHSRAR VVHAGGDATGKVVELDVSAMVRANPLIHIIEHAFLEDLIVRDGAIAGVRLLVRGGETFRS ADMAASRVILATGGAGRLYPYTTNPAVATADGLAAAWRAGAQVADVEFYQFHPTAMAVGE HFLVSEAVRGEGAVLLDEHGERYMTRVDERAELAPRDVVARENFRVMQAQGGKPVMLDVS PMRRENPDLAEFLRHRFPTIDAYTRSLGFDWSKEPIPVAPAAHYYMGGIRTDLEGRASIP GLYAAGECARTGVMGSNRLASNSLLEGLVYGRRAGLAAVNDPAGSVWNPVWFSNSATGRI VSDTPVELSMPAPDERAGANGRPAIWDRTRIQNTMWAGVGVLRDGDGLRQAIDQLGTGLA LADADATEPAATACEPDPITRLENRNLLTVGYVEANAALRRTESRGAHARTDYPESCDEW AQSIAYINA >gi|197324945|gb|DS990229.1| GENE 563 622933 - 623826 426 297 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163755345|ref|ZP_02162465.1| 30S ribosomal protein S6 [Kordia algicida OT-1] # 4 294 8 282 286 168 37 6e-40 MLTQHIIRTAVEAALAEDAPYGDITCETTIPADETGSAHLTARERGVMSGIAVFTAAFTA QNPGIGVSPLIADGERFQRGQILATVEGPVRDLLAAERIALNFTQRMSGIATMTASFVDA VNAIYDDGHDGTVTRPHRYERTRIVDTRKTTPGLRPFEKYAVVCGGGHNHRYGLSDAVMM KDNHLAALAARGIDLTGAIRHVREQVGHTTHIEVEVDRLEQIPAVLAGGADTIMLDNFSL DDTRRGVDIINGKAIVEASGNMSMERVPAVAATGVDVISVGALTHSVRSIDLGLDWN >gi|197324945|gb|DS990229.1| GENE 564 623829 - 625106 1196 425 aa, chain + ## HITS:1 COG:MA3264 KEGG:ns NR:ns ## COG: MA3264 COG1104 # Protein_GI_number: 20092080 # Func_class: E Amino acid transport and metabolism # Function: Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes # Organism: Methanosarcina acetivorans str.C2A # 9 412 53 422 448 267 38.0 3e-71 MTDTPNASGEPDELYLDAAATEPVTRNVIEAMMPFMTDAYANPASMHQPGKTAARALDAA RASFAAGLGARPDDVIFTSGGTESDNLAIKGIAMARMRALGLQPVYGLAGIDDEPSGVNP AQAGEHPAIRRPRIIISSIEHPAVAQSAQWLHEWFGFEVVHIPVDGQAHLDLDALEQELD GEAGERTTLVSAILANNEVGTVEPVEELVRIAHAHGVPIHVDAVQAAGQIPIRMRDWDVD ALSVSGHKFGTPKGLGALLVRGRTPIEPVLSGGGQERGLRSGTQNVAGAVALAIGLNESN ARMAAQYRELTDSRDMLIDAVRRVVPRAELTGDPVSRLPGHASFIFPGVTGEALLVDLDA RGIAASSGSACAIGRHEIPGTLLAMGLEPQIAKSALRMTFRRPLTREEIERISMALEDSY TELTY >gi|197324945|gb|DS990229.1| GENE 565 625287 - 627209 3048 640 aa, chain + ## HITS:1 COG:ML1498 KEGG:ns NR:ns ## COG: ML1498 COG1217 # Protein_GI_number: 15827789 # Func_class: T Signal transduction mechanisms # Function: Predicted membrane GTPase involved in stress response # Organism: Mycobacterium leprae # 8 621 4 612 628 719 61.0 0 MAVRGDIRNVAIVAHVDHGKTTLVNAMLQQSHVFNEREEVPDRVMDSNDLEREKGITILA KNTAVEYTGPLAAKYGYPDGITLNIIDTPGHADFGGEVERGISMVDGVVLLVDASEGPLP QTRFVLRKALEAKLPVILCVNKVDRPDARIEEVVSESTDLLLGLAQDVIEEGVDLDLDHL LDLPVVYCAAKAGYASVNQPENGGLPDNDNLEPLFEDIIKYIPAPEYEEGAPLQAHVANI DSSDFLGRLGLVRIYNGTLEKGKTYGLSRVDGSIENFRVVELLRTQGLERTPVESAGPGD IVAVAGVNDIMIGETIVDPNDPKPLPLIHVDDPAISMTFGTNDSPLAGREGKDHKLTARM LKDRLDRELIGNVSIKVLPTDRPDAWEVQGRGELALAILAEQMRREGFELTVGRPQVVTK TIDGKINEPMENTTIDVPEEYMGTVTQLMADRKGRMDSMSNHGSGWVRLQFTVPSRGLIG FRTALLSATRGTGIASSLSAGYAPWAGAIVTRQNGSMVSDRAGVATPYAMQRLQARGNFF VEPQSNVYEGQVVGINNKPDELDVNITLAKHMTNMRSSTADVLETLTPPIKMSLEESLDF ANEDECVEVTPEAIRVRKIILSREDWYKWRAKQRRQNNNA >gi|197324945|gb|DS990229.1| GENE 566 627361 - 627531 113 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNKHSSQSQEFPSYHTSPKNAEIGLVWHTDPSEQPLEKQKRRAQWTLRNQKQAEAS >gi|197324945|gb|DS990229.1| GENE 567 627627 - 627863 87 78 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRFLPVLTLVWQVLRQRYGVMSRRRGQDMSSPGLLACNWMACGHGFRCLPYGSLRQRSEI SPRRYSASPYTGDHDSIG >gi|197324945|gb|DS990229.1| GENE 568 627847 - 628380 458 177 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0604 NR:ns ## KEGG: BBPR_0604 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 177 1 173 173 323 97.0 1e-87 MTQSDDRSILPWSHRLSPVLRGLVTVVAGILCGIVGTFAHRMGASANIPYGLVLAFLILG ISAWCARSRLDVVGLALHLIASSGTIWLIAVQSTDDALTPVGFSGSSVPYFSQRVGYLWL IGCIVVQLMLMFLPARWFAITPKTDGKTDDKTDDKNSQQPSQLSVSRQTPDTLAESR >gi|197324945|gb|DS990229.1| GENE 569 628380 - 629408 751 342 aa, chain + ## HITS:1 COG:Cgl2836 KEGG:ns NR:ns ## COG: Cgl2836 COG0077 # Protein_GI_number: 19554086 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydratase # Organism: Corynebacterium glutamicum # 2 283 4 258 315 89 29.0 9e-18 MAEYTLHFLGPTGTFTHQAAIEAAKTIRPSGASVTLTPEPDVPTILDAVQRRGDWGIIAW ENNVEGYVVPNLDALIDADNVVGFARVGVNVSFDAFTLPGTSLADCRTVTAHPHGLAQCR RFTADHQLQQLPASSNGAACRDLEPGQVALGPSICGDLYNLTRVACAVGDYAGARTEFLA LAPRDEAITVLRERASRTAGDETVESMPAPGETTDPVSEYESIIAFIPLSTGPGVLANLL DVLRDAGLNMTSFISRPIKGRDGTYSFIATIDAAPWQEHLRDVLTQVVDHGDWVKTLAVY PRRERPNPPIYAWSLPNGGVRREPAAPGTWTEGDTARRELLW >gi|197324945|gb|DS990229.1| GENE 570 629402 - 630439 984 345 aa, chain + ## HITS:1 COG:MT3861 KEGG:ns NR:ns ## COG: MT3861 COG0287 # Protein_GI_number: 15843374 # Func_class: E Amino acid transport and metabolism # Function: Prephenate dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 15 325 10 309 323 136 36.0 6e-32 MVGSHDTAAAVRLTVGVIGLGLIGGSLARRLAIRGVSVVAWNHRPHPYAQAEADGIRCMR TLAELVEAQPEVIVLCNPLKAMPAILGELRPLLEPYQDITLTDVGSVKMMVRDQVRDAGL AGRYVGAHPMAGNELSGWAAAAPALYDNALWAMTVDGDTDYRRFLAVARMITDDVGNRVI VLDDDTHDRAAALISHMPHVVATALINQLTDDPDRNIAAALAAGSWRDMTRVALTDPDRT RAMVEEDADNVERLLRMMAARLTEVADELHGADAGAIAAFFADGQPFRDYKSAVRSGADG DGPVFDLTIPAEGWQAALLDSARRGEHILRFGDDYTACVQRRSAM >gi|197324945|gb|DS990229.1| GENE 571 630513 - 630764 319 83 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0631 NR:ns ## KEGG: BBIF_0631 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 83 1 83 83 148 100.0 5e-35 MAIPNEIPANARVVVRVSEGVDPTDHRMKYRDYVGHVTSWDGHTLDMIRDAAANGSRPEH RVTIDADTIITLKPVPERHFTRP >gi|197324945|gb|DS990229.1| GENE 572 630850 - 631854 892 334 aa, chain + ## HITS:1 COG:Cgl1981 KEGG:ns NR:ns ## COG: Cgl1981 COG0582 # Protein_GI_number: 19553231 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Corynebacterium glutamicum # 10 334 36 315 315 222 42.0 7e-58 MDGDGDLSAFLAYLRANRGLSGNTVKAYGTDVRECLHALASRGIADLRQVTTDDLRGWMA FETRDHARSSMARKVVSVRSFFAWAHEHGRIEADPAAVLMTPKLPDTLPSVLTEAQAERL MDRVDDDASLHAASSQRYETRHDEMPRLDSAHRGEGMSQRDEVVALRDAAMLELLYATGI RVAELVGLDIGDVDWSHRTIRVTGKGSKQRVVPFGDPAEKALAGWKEHGRPLILRRAGAG TLDTAALFLGMRGRRIDQRIVRDVVHRAARESGVPDISPHSLRHSAATHMLDGGADLREV QEMLGHSSLRTTQRYTHVSIEQLKERYRQAFPRA >gi|197324945|gb|DS990229.1| GENE 573 632251 - 633234 188 327 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855436|ref|ZP_02478201.1| 30S ribosomal protein S21 [Haemophilus parasuis 29755] # 100 325 75 313 320 77 28 2e-12 MLKFIAKRLANYVVMLFVAISCTYFLASGFMRPRSNYESRTPRPPAASINRSLDLANIND HTNIFTRYWRWLTGVVTRWDWGLSPDLGSVNGALAPRIVASTELVTIATVLSIVLGVALG IYTAQRQYKWQDRLFGTTATFFLVIPTAVFALLVVMLAIFINGASGFRLFYVTGLSSYTG NNWFLRLADFGQHIILPTIVLTILGMVSYHLTQRTYLLDEMHADYVRTARAKGLTRRQAI RRHALRASLIPTAVNVAFSIASVFTGAVITESIFAINGLGRYFIQAILDNDINASVAIAA FGGVCTLAGALLADIVSAWLDPRIKMS >gi|197324945|gb|DS990229.1| GENE 574 633256 - 634200 1190 314 aa, chain + ## HITS:1 COG:MT1319 KEGG:ns NR:ns ## COG: MT1319 COG1173 # Protein_GI_number: 15840729 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Mycobacterium tuberculosis CDC1551 # 33 308 10 285 291 230 45.0 2e-60 MTDTTVKNNETTQKESDESTSKGDIKHIGYAGLIARRFFRQRSAVVGLIILLVLVFFALF GANIGKWAYDDPDFLALSAGPSASHWLGTDSGGSDLYAMVVRGLGKSLMIGIITSVATMA IASLLGTAISFFGGWVERVGMWLLDMLLVVPSFLLIAMIVRTANATTGWIWLIIGLTAFG WVGYARIIRTLTLSLRERDYVKAARFMGVGSFKIIVRHLMPNLASMIIINTVLGVVGAVN SETALSYLGLGVKAPDVSLGSILQSGAVSMQTAPWLLVFPSIALVLLTFSMQLIGDGLRD ALDPNSRASGTVGA >gi|197324945|gb|DS990229.1| GENE 575 634218 - 636416 739 732 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 396 707 12 313 329 289 45 3e-76 MKNNKSKGSVSSEHKEIVRDDILQYELLEGNGPKGAPKGDPIMQVRDLHVSFATEAGVCR AVRGVNFDLWRGRTLGIVGESGSGKSVTALSLIGLLDDNAKVTGSIIMNGEELIGKTDEE MSEIRGERIAMVFQDPLSALTPMFTIGDQIAEGLITHHPDMSKQQIHDRCVELLDLVGIP QPEERLSSFPHQFSGGMRQRVMIAIAIANNPDVIIADEPTTALDVTIQAQILDVLAKAQK ETGAAVVLITHDLGVVAGAADDILVMYAGRPVERASIDDVFQHPSMPYTMGLLGAVPKPH IAASQRLVPIQGNPPSLVDIPKGCPFSPRCPLATPECSLSEPNLEVVDANSGHLASCRRL QEIIDKNMKYTDVFPVPDLLPADWADVPRDQRPVTLEVDHLVKHFPLTGGGMFRRTIGQV AAVDDVTFKIRQGETLALVGESGSGKSTTLMEIMNLMKPEDGRIVVLGHDLAELKKKAER KALRKDLQIIFQDPMSSLDPRMPIYDVLAEPLKVHKWSKEKINRRIGELMELVGLNPDYV DRFPAQFSGGQRQRISIARALATDPKVLLLDEPIASLDVSIQAGIINLLEDLQAKLKISY LFVAHDLAVIRHISDRVAVMYLGQVVELGETEDVFTHPRHPYTQALLSAIPVPDPVVERT RQRIILKGDLPSPSEKHPGCRFASRCPVKLRLTPEQQKMCETKRPVLTSDDQIATEFACH FPLDVNDESAPF >gi|197324945|gb|DS990229.1| GENE 576 636589 - 638370 2712 593 aa, chain + ## HITS:1 COG:MT1317 KEGG:ns NR:ns ## COG: MT1317 COG0747 # Protein_GI_number: 15840727 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Mycobacterium tuberculosis CDC1551 # 68 575 78 579 591 223 31.0 1e-57 MSFASTARKVTAFAAAAATLLALGACGNSNNGSAGNNGAKSTSEPQEGVPTNYTGSFPMP DPGKAYNNPKDRGELKQGGTLTLPITEIGPNWNAIDVNGNTVYMSGLWRFYMPCIWEYPA DGSMENIKPNANYVTKVEQTSDSPETVVFTINDKASWNDGTPITWKDFEATWKVQSGKSD KFTPALTTGYDQIKSVTKGDTDKQAVVTFEKDFYPYQSLFNLLYPSEALTGDDTKDGETF SKGWSNDSHSDKWGAGPFVVSKSSDSEVTFTPNPKWWGDKPLLDKVVLKQMEPSAAMNAF KNGEIDAVGASDAESMTSAKTVKDAYLRRSYDSGVYTLTINTKNIPLEVRKAFVQGVDRS QLQKIDFQGIDWTEKTPGSLILPQFQDGYEDNMPAESKFSTANATKTLEDAGYKKNSDGY YEKGGKVAAITYTTFSDSASTKAKATAIQKMAKTVGIKVSIDIKASNTFSDTVSSGNWDM IGLGWSASDPFGYASSAYQLYGSKSESNFSFTGTDEIDKELESIPGIKDSTKAIAQFNKA EKEAQKLYAQIPFENGQITVAVKKGLANYGPAGYSSGARVMVTVHPENLGWEK >gi|197324945|gb|DS990229.1| GENE 577 638451 - 638525 63 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MWTMLDHPQPAMPAAPDSGGCRHD >gi|197324945|gb|DS990229.1| GENE 578 638566 - 639978 1986 470 aa, chain - ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 9 465 1 438 450 346 38.0 7e-95 MASNQPDNLALTAEQLREYSAAFNADRANLVAANAAVSNGILQAATSYRGVRELPRTFSV ELKQGSITSQEHSGRCWMFASLNTLRYELMHKWNLDDFEFSESYLFFYDKLEKSNFYLEN VLKTLDKTTDSRIFEAVNEGPADDGGWWQMFVALVKKYGLVPKEAYPESSNSRDSSAFEQ YLNTKLREFAAELRDAHQAGKSVEELRSLKTGQMSVVYRICAIAMGEPPASFDLLLRVKD EGKDDAKASESGTKSGIDSRRQIVEHGITPQEFYTKYVGEDLDDFVSLTNSPLASTPYYR RYQLAFVGNVAEAAPMDFINVPLDVFRKAAVDQLTAGHPIWFACDCAQFSLRKAGIFDRG TVRVDELFGTEFASDKAHGLEYNDSRSNHAMTLTGVNLDKAGEPDRWKVENSWGKDNGKD GYYVASGAWFDRYVQELIIRKEYLDERTLAAVDSEPVTLQPWQPISKVCR >gi|197324945|gb|DS990229.1| GENE 579 640125 - 640982 1066 285 aa, chain + ## HITS:1 COG:RSc0140 KEGG:ns NR:ns ## COG: RSc0140 COG0708 # Protein_GI_number: 17544859 # Func_class: L Replication, recombination and repair # Function: Exonuclease III # Organism: Ralstonia solanacearum # 1 284 1 256 261 183 40.0 3e-46 MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELDPIFGEFGFEYATAGK IADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLPGLDEDVDSGRWIEADVTTPQGY GITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHTP LDIKNAKANIKHAGFLPAERAYVDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDNN VGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTITYDV >gi|197324945|gb|DS990229.1| GENE 580 641122 - 641943 1243 273 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0639 NR:ns ## KEGG: BBIF_0639 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 273 1 273 273 476 100.0 1e-133 MGLFGFGKKKREREEAEAKAENREDEAAVDTEETAAPTDVADTYEGRGESYGPWDVDDEN VPDYDEYLDMGSYYLPYLAGLQLRIKANRSTQEILGATISYGASSLEIEAFAAPKTMGLW DDVRADLLEANEKASEHAGVFGTELHLPVTVKGGKTVNTRIVGVDGPRWMLRGIFSGKAA NDDGNSDTEALNKYFADIVVERGDEPLAPRDLIPMHPPVTPAQRQAAAKTNDQADDKEHL DDIPDKPEGPFDSDQQTEVKTTLSRGPMFSEVR >gi|197324945|gb|DS990229.1| GENE 581 641983 - 642756 1067 257 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0640 NR:ns ## KEGG: BBIF_0640 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 257 1 257 257 425 99.0 1e-118 MTDQNQKKRTGMASLAAAGEGEDFSVIDAIGGPRGVIESMLPGVLFVVLFVVTSNLNLTI GVSAALAVLQVVIRLVQRQSVMGALSGLIAVGICLIWAWQSHEARNYYMFGFLTNAAYIV LLSFTLLIRVPGLGLMVEFIRTIPTEHFRAWLHGWLDDKPLRRAYTIVTVLWIGVFALRL IVQVPLYLADSVALLGTARLLMGIPFWALAIWVSYLIIATPLHRHIAAAKAAAGGGKDGD SDGRNSGDEGDNAAGQA >gi|197324945|gb|DS990229.1| GENE 582 642782 - 644044 1179 420 aa, chain + ## HITS:1 COG:Rv2689c KEGG:ns NR:ns ## COG: Rv2689c COG2265 # Protein_GI_number: 15609826 # Func_class: J Translation, ribosomal structure and biogenesis # Function: SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase # Organism: Mycobacterium tuberculosis H37Rv # 11 417 19 403 405 172 33.0 2e-42 MNAQVRIERYADQGRCVGHIDGRVVFVRFALPGELVQVALDEPHDRDDRYWTGEVVEVIE PSPDRVDPAWPLAGPLAMGGGVGGADLVHVSLEGQLRWKAATISDQMSRLGHVDVTVPVE RAEGDTENGGLHWRTRIEMIADDDGMPSMRRRGSHKRVPLDTMPLATDNLLAVADREHVW DGGFEPGSQIRLSVPEPRKQPIEGNYAVLVDGELRAGNRHLMETVTVNGRDFQYMVDANG FWQVHRQAPVMLAGHVIDLANKALDGMTSACIWDLYSGAGLFTLPLATMIAERTRMLSVE GGKTAVKNAQRNLRALNLPDVDARCGDVSATLAHVPAHLSRPDLVVLDPPRAGAHAKVCR QIAQAGAKDVIYVACDPTSLARDTATLISLGYRLSDIRAYDIYPMTHHVETVAWFTRIGR >gi|197324945|gb|DS990229.1| GENE 583 644094 - 644663 659 189 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0642 NR:ns ## KEGG: BBIF_0642 # Name: not_defined # Def: conserved hypothetical secreted protein # Organism: B.bifidum # Pathway: not_defined # 1 189 16 204 245 329 98.0 5e-89 MWRRGIGIACAAAAVMSLTSCVPQGKAVGDTQESEPEIAHEGVQRQDIVVGVIGSVDTGL DSDVLNAFNKAGLKAPYVSTSMVDDPDAAAQRGVRSMVTRKATVIMIDGIAVNEKNAEDW DAALQSARKAGVPVILLDPVAPPDDDTLFAVTFTLTGKGDGVTALDDAVVTIVDDKPHPR TMNVTDNLS >gi|197324945|gb|DS990229.1| GENE 584 644961 - 647501 2885 846 aa, chain + ## HITS:1 COG:Rv0908 KEGG:ns NR:ns ## COG: Rv0908 COG0474 # Protein_GI_number: 15608048 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Mycobacterium tuberculosis H37Rv # 14 801 10 756 797 462 40.0 1e-129 MNATMNLPEVEENGLTASQVRACEESGQTNAVKSTTSRSVLDIVRANVFTLFNGIIFAAM VLVLITGSWKDAVFGFVILINTGIGIVTELKAKRTLDRLSILVTSDYAVRRDGENTEVPS RDIVLGDLLWIRSGEQVPADAQVLSSYGLELDESMLTGESRTVRKEDGDQVYSGSTAVSG VALARVNAVGEHSYAATLTAQAKVYKKTVSDLNKGINTILKFMTFLVVPLCVLLVWSQMR TVGGWNAAIASGEWRQAIVSAVAGVVGMIPEGLVLLTSLNFAVAAMRLARKNTLVQELES VETLARVDCLNLDKTGTITDGGIMFDRLVMLERMDGDDRVESAATQALYDLSNEEQPNGT GQAVLDGLGERGYHAGPVRARVPFSSARKWSAIVTPAAAAETESAADREPPTVWYMGAPE VMLSALSGEHGDVLEAVNDYANSGNRVLLIARATLIRKSDGDAATDSSWFTQSPELLPDA KPVALVLCSERVRDDAQPTLAWFRDQGVRCRIISGDNPVTVGAIAAKVRLTGDREPHAID ARTLPQDINELARVLENVDVIGRVLPDQKKAIVQALHTSDHVVAMTGDGVNDSLAIKEAD LGIAMGNAAPATKAVAQVVLVDSKFSHLPDVVARGRQVMANMERVASLFLVKTVYSALIS LGVVLTAIPFPYLPRHITYVGALTIGMPAFILALAPNTRRYIPGFLRRVVHFALPGGVAI ALSVLLSSWLLPDVMGWDVNDAADLSALRTTCAIIVFVLGVFMLARVAQPLNSWRGVLVA VFAAAGVIGMLIPFVARFFDLHLPTGRVLIATVAALLISTALFAVCHVILASVTRIFPHI KPTRQS >gi|197324945|gb|DS990229.1| GENE 585 647538 - 650279 4004 913 aa, chain + ## HITS:1 COG:ML1814 KEGG:ns NR:ns ## COG: ML1814 COG1048 # Protein_GI_number: 15827972 # Func_class: C Energy production and conversion # Function: Aconitase A # Organism: Mycobacterium leprae # 6 913 4 942 944 1162 62.0 0 MWNSISFDLGGSMSVRDDQLATLNVAGKDYDYYRIADLPGVDHLPYSLKVLVENLVRNID GANITDEHVKALLNWAPQAQPSHEIQFTPSRVIMQDFTGVPCIVDLATMRDAVKDLGGDP EVINPQVQSDMVIDHSVQIDKYGVADAVQQNMDIEYQRNGERYQFLRWGQQAFRNFRVVP PGTGIIHQVNIEYLAKVVMTKTSGLDDGRELAYLDSCVGTDSHTTTENGLGVLGWGVGGI EAEAAMLGQPISMLVPRVVGFKLTGSIPEGVTATDVVLTITDMLRKHGVVGKFVEFYGEG IASVPLANRATIGNMGPEFGSTCGIFPIDGVTLDYLRLTGRSEEQVALVEAYAKANKLWG DASDPDYVEPQYSEYEELDLGTVVPSIAGPKRPQDRILLSEAKDMFEKTAPAYETDKTVK DPVAVSTDFRGDFDIENGDVAIASITSCTNTSNPSVMIAAGLIARNAHAKGLSPKPWVKT SLAPGSQVVADYLKAAGLQDDLDALGYQLVGFGCATCIGNSGPLLPEISEAINANDLTVT AVLSGNRNFEGRISPDVKMNYLASPPLVIAYALAGTMDFDFETQPLGTDADGNDVYLKDI WPTNEEVAAVVDGTVSREMFLKDYASVFDGDHRWKGLDVPEGELFAWDEHSTYVRKQTFF DGMKATLEPVADIHGARVLALLGDSVTTDHISPAGAFKASSPAGKYLTERGVEPKNFNSY GSRRGNHEIMVRGTFGNIRLRNQLLASVGEEVTPGGFTYDFTTGKPSTIFDASLNYKAAD IPLVVLAGKEYGTGSSRDWAAKGTVMLGVKAVITESFERIHRSNLIGMGVLPLQFPAGES YESLGLDGTETYDIAGVDELNSGVTPKTVHVTATHTDGSTTEFDAVVRIDTPGEADYYRN GGILQYVLRNLMK >gi|197324945|gb|DS990229.1| GENE 586 650588 - 651484 607 298 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0645 NR:ns ## KEGG: BBIF_0645 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 298 1 298 298 596 100.0 1e-169 MFEMRNEPPPNQYMRHQAWLIQRYYLKRCRAVRDTLEHEPVFALSSALGLMGIAPPETAV LDLGKEHIVVRNRDARRGHPANVACHAWSLLDDRIVIRIFDLYCTSPAATFAQFVRFNWF EETIILADRLTCRDERLRRATKQELMDFLDERKVYGGKAARRALRLSRPNTDSRWERELR LDAMKWGLPNPEANHPVDLGSGLAWLDMAYEKYRVAMEFHGQQHLEQYVADTRRMNALAA KNWVVLPAWQSTVLDQAELHRYFSQVAAALEHAGAVDFLHPRMDLWTLSGNPELLEPF >gi|197324945|gb|DS990229.1| GENE 587 651841 - 653703 2485 620 aa, chain - ## HITS:1 COG:HI0738 KEGG:ns NR:ns ## COG: HI0738 COG0129 # Protein_GI_number: 16272679 # Func_class: E Amino acid transport and metabolism; G Carbohydrate transport and metabolism # Function: Dihydroxyacid dehydratase/phosphogluconate dehydratase # Organism: Haemophilus influenzae # 1 613 1 611 612 732 57.0 0 MTEMRSAKIMNGRVFAGARALYRAAGVKGDDMGKKPIIAIANSFDEFLPGHVHLNKVGRI VSEAIKEAGGIPREFNTMAVDDGIAMGHTGMLYSLPSRDIIADTVEYQCNAHCADALICI PNCDKVVPGMLMAALRLNIPTVFVSGGPMEAGTTILADGTVKSTDLIDVMYATADDSVSD EELLNYEKTVCPTCGSCAGMFTANSMNCLTEAIGLALPGNGTILASHSYRKDLFKRAAQQ VVKIAHQYYDDSDDSVLPRSIATKEAFENAMTMDVAMGGSTNTVLHILAMAQSADVDFTL DDIERISHTVPCICKASPSGKWEISDIHRAGGITGILGELDRAGKLHTNVHSIDYPTLEA KLADWDIMRPTCTEEAQQMYKAAPGHIISPEPWTHTTLFDSLDRDRANGAIHDIDHPEIH EGGLAVLRGNLAPDGCVVKTAGVPQEIWKFRGPALVVDSQEQAIEVILDDTLKPGMALVI RYEGPKGGPGMQEMLYPTSFVKGKGIGKQVAMLTDGRYSGGSSGLAIGHMAPEAANKGPV ALIKNGDIIDIDIEARSVNVELTDEQLAERRRELEAGDGYVAHRDRKVSQALKAYAAFAR SADKGATRDPELINKLSGLA >gi|197324945|gb|DS990229.1| GENE 588 653712 - 653912 58 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MMEIYLNRSDYSLTQRPERVRWILPVRCRLADNIKGYIGLIHCEFCNTYENSIFRLLTCR VSLARA >gi|197324945|gb|DS990229.1| GENE 589 653913 - 654257 660 114 aa, chain + ## HITS:1 COG:MT1435 KEGG:ns NR:ns ## COG: MT1435 COG1758 # Protein_GI_number: 15840849 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, subunit K/omega # Organism: Mycobacterium tuberculosis CDC1551 # 24 107 50 133 133 100 63.0 6e-22 MIRRLAKMAEETKDTEVKGNEEFGTAPVPEGFANPPIDDLMKHADSKYALAIFAAKRARQ INSYFTQLNEGLLQNVGPLVEYQNQEKPLSIAFREIDEGLLEETLGEDDLSEGN >gi|197324945|gb|DS990229.1| GENE 590 654508 - 655725 1918 405 aa, chain + ## HITS:1 COG:Cgl1565 KEGG:ns NR:ns ## COG: Cgl1565 COG0192 # Protein_GI_number: 19552815 # Func_class: H Coenzyme transport and metabolism # Function: S-adenosylmethionine synthetase # Organism: Corynebacterium glutamicum # 7 405 8 405 407 479 64.0 1e-135 MTNQERKLISAESVTEGHPDKVCDQISDEILDELLRQDPQSHVAVETSAATGVFLVFGEV TSKGYVDVQSTVRETLRRIGYTSSEVGLDADSCGVIVAITGQSAEINQGVARLTGEKETE ASREERYEAQGAGDQGVMFGYATDETDVLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDG KTQVTIEYDENDKPLRVDTVLISTQHDPEASREWLAAQLKEHVIDPVLDEVLGDGVKHDD YRQLVNPTGSFVLGGPAADAGLTGRKIIVDTYGGAAHHGGGAFSGKDPSKVDRSAAYATR WVAKNIVAAGLAHRVELQVAYAIGVAEPVSVNVETFGTEIGVTREQIQQAVRKVFDLRPA AIIDELDLKRPIYAKTAAYGHFGRVDVEFPWERTDKVEELKAAIR >gi|197324945|gb|DS990229.1| GENE 591 655706 - 655834 98 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MHVVCIDKITPGFASRQPPLAGTLRSETEGDRCDLPVSGWRP >gi|197324945|gb|DS990229.1| GENE 592 655913 - 658153 1412 746 aa, chain + ## HITS:1 COG:Cgl1564 KEGG:ns NR:ns ## COG: Cgl1564 COG1198 # Protein_GI_number: 19552814 # Func_class: L Replication, recombination and repair # Function: Primosomal protein N' (replication factor Y) - superfamily II helicase # Organism: Corynebacterium glutamicum # 27 742 5 684 688 251 29.0 4e-66 MSTNDAQQLAFDGMAPRKRRKRAPAEKIVAAEDPIAQVVLDVQATHLGQTFDYLVEERWS QTARPGVMVRVRFGGRLLNGVIWKRTAASATPRSALRFLERVISPHVLVSESMRDDITRI ADAYGGTRANILRLAVPPRVARIDGEQQLAARSLWVGRLRFSHVSDELMQRCFDTIQASY DGAAMLRSSLEGSSFAALVMDARPGARAWARDAAWMIAAAMRQNRAAVVVLPGIRQCEDL AVALEGLGLSRFAPGGAEHGGYSGDFVVLAAGLPPAERYRAYLAAATGQVGCVIGLRAAM YAPVEGPALFMMVDDAAYQQADGMMPYAQARGVMRLRAESHGGVFVALSYARSPLSQWEC EDHTAVTAVSGPSASVTPLPAARRDQMPWVRWLNREELARLADPSIGARVPHTAVTVLSK ALQTGPVLLSIPSDGMQEALSCVKCHAQARCAKCTGPLGRMGDGVPRCRWCAAAAVDWHC PHCGCERMRVIRVGATGTARELGGLFRGVSVVISSPSQPRGVVEYVDDAPRIVIATPGAE PRVLPASRQSEQDAGEYRAVTILDAWNSLYAPGVDARVDALTAWMRVMALCAPRTRGGQG LLIGECDPAVAHALMMWDSASLARNELLERGQAGMPPVCAVACVWGRRDAVMAALDDIGV LRGDWASLDVAGEPIPGMLGPVPIAAPVTVSERELESMQDRVKALVRVPVGMRAQLAVRL RSAVARHMASRTPGELRFQIDPKDLI >gi|197324945|gb|DS990229.1| GENE 593 658090 - 658338 68 82 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313139870|ref|ZP_07802063.1| ## NR: gi|313139870|ref|ZP_07802063.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 82 1 82 82 146 100.0 5e-34 MWHKKWPECRKQRFLTFRGKESPSHLTNRNRRFRMLIQSAVRHVTPPLSSKRHLDAADNL SDQIKSLGSIWNRSSPGVRDAM >gi|197324945|gb|DS990229.1| GENE 594 658612 - 658854 130 80 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0650 NR:ns ## KEGG: BBIF_0650 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 80 1 80 189 133 98.0 2e-30 MNDSAARGRAHPWFHAIETTRRIIRRTDAFRHATISAASESFRPNRFGSPESTRQMSYTP TSISAIIAVSKTTVAVPAPV >gi|197324945|gb|DS990229.1| GENE 595 658868 - 659587 1107 239 aa, chain + ## HITS:1 COG:mll7522 KEGG:ns NR:ns ## COG: mll7522 COG1011 # Protein_GI_number: 13476249 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Mesorhizobium loti # 34 233 4 201 212 82 30.0 6e-16 MDGGIMKGWPGEPDMEHDVLVAQGPAAAADGKPISNVIFDFGNVLIYWDPSVVLLPRYSQ ETIDQFLDNDISGFYDANDRMDGGASPDEGVAWMREHYGDKWADILRYYLDNFEDSLTGV VPGARVLVNDLKAAGIGVWGLSNWEKELFPIALKHCEILQRLDGRLVSGYVHMRKPHKDI YEKALEEFGISAESSVFIDDKAMNIAGANEAGIRGIRFSDARKLRELLIEQGIDIPAVQ >gi|197324945|gb|DS990229.1| GENE 596 659678 - 660652 1035 324 aa, chain + ## HITS:1 COG:Cgl1562 KEGG:ns NR:ns ## COG: Cgl1562 COG0223 # Protein_GI_number: 19552812 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA formyltransferase # Organism: Corynebacterium glutamicum # 2 322 1 313 315 218 44.0 1e-56 MLKILFAGTPDVAVPSLRALAADSEHFEVVAVLTRPDAPTGRGRKLTPSPVKTAALELGL PVLESDPAEPTFLDELKVTGAQAAAVIAYGRILKQSVLDALPCGWYNLHFSLLPHWRGAA PVQRAIWSGDDMTGTSVFRITRAMDAGPLLVQSETPIGEHETAGDLLTRLGESGALVLRD ALRTVEDGTADPVEQAEGDYPVAEKIRVNDAHIDFSAPVEAVDRQIRACTPNPGAWTELD AGGLGLDDGLSTLHVLRAHPADMTNPNVPGSLVSGALAAGKKNVWIGTGSTPLELLEVKA QGKKAMRAADWARGARLSEAARCR >gi|197324945|gb|DS990229.1| GENE 597 660842 - 661597 876 251 aa, chain - ## HITS:1 COG:L0085 KEGG:ns NR:ns ## COG: L0085 COG0560 # Protein_GI_number: 15672587 # Func_class: E Amino acid transport and metabolism # Function: Phosphoserine phosphatase # Organism: Lactococcus lactis # 42 250 1 209 216 232 56.0 7e-61 MLDETLQPSDESYDVPDVKAFAAAHQSPSDTMGDGTAAAPTLSKPGLLVMDVDSTLIDEE VIDELGEAAGSGDEIAKITERAMRGEIEFCDALRERVALLKGLPVSVFDTVHDKLHFTNG ALALIDELHRHGWKVGVVSGGFHEVVDRLAAEGHIDHWLANRLEVVDGALTGKVLGNIVC KTVKLHALQAWAARDGVPMSQTVAVGDGANDIPMIQAAGLGIAFCAKPKTQLAAHESINE RDLTKVLDFLR >gi|197324945|gb|DS990229.1| GENE 598 661635 - 661808 111 57 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MHESLRISAFAPAAVHGAGDSGSAVGAISKVIVAVADPAIRRARNLIGKRARKRGEQ >gi|197324945|gb|DS990229.1| GENE 599 661805 - 663508 2028 567 aa, chain + ## HITS:1 COG:MT2175 KEGG:ns NR:ns ## COG: MT2175 COG0464 # Protein_GI_number: 15841607 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ATPases of the AAA+ class # Organism: Mycobacterium tuberculosis CDC1551 # 22 556 11 585 609 390 40.0 1e-108 MNDIMHDGTPDGIWNSQDHPSGLPDSGPVSSSGTGAESATARQDARKIRENVARELAAAN DQLMAKNHALAQALSRAGKELTKAKAQLSQMAQPPKTFATMVKVDSSMTDELGVQHASAE ILTGGRRLVVPVAANVNASRLTAGACVLLNENMVLVEQRGTDMLGSVRTIRQVLDDGRLI VADGGGNPSVIRRSGALAHETFANGQRVIVDPSGRLALELLPDENDADLVLEEVPDVTFA DIGGLDSQIERIRDAVQLPFLHRSLCERYNLKAPKGVLLYGPPGNGKTMIAKAVAHALSD GFGRGSGVFLSVKGPELLNKFVGESERLVRQIFTRARERAADGRPVIVFIDEMDSLLRTR GTGVSSDVETTIVPQFLSELDGVESLDNVMVIGASNRVDMIDPAVLRPGRLDVKIRVDRP GADQAASIIRHYLTDDLPLQPGLDADGLSRVLVRDIYTRSSRRHLCDACNDQGQWSAIFL SDVASGAMLKNIVDRAKTKAVKASILGGDDVALNVELLGEAVEDEFVETRGSVMDVDPVQ WSRINGMDNGRVVRIRPVPRKEKENMQ >gi|197324945|gb|DS990229.1| GENE 600 663505 - 665145 1668 546 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0655 NR:ns ## KEGG: BBIF_0655 # Name: not_defined # Def: hypothetical protein with Pup-ligase protein domain # Organism: B.bifidum # Pathway: not_defined # 1 546 1 546 546 1030 99.0 0 MTVRRVMGTETEYAVSAPAVSHANPVQLSFDVIGAAAGPERSRIRWDYRQEDPVNDARGT RLERAAARPDMLTDEPQLNIVNVIAPNGGRMYVDHAHPEYSAPETTDPFEAVRYDHAGDL LMRRAAASASVGTGHDIVLHRNNVDGKGASWGTHENYMMLRSVPFDTVAALMTAHFVSRQ IYAGSGRVGIGERSETAGYQLSQRADYIHAILGLQTTFERPIVNTRDESHSPSDYRRLHV IVGDANRMDVPQTLKLGATSMLLWLAEHADETGYDLAALLDSMALVDPVSAMHTVSHDLT LQAELPLRDGGVTNAWIMQVRLRAAVYEMGALVYGTDTRGEPLWPDKPTTGIMALWGQAL ADVAAIRHADDDTRLNMQPEASRVEWLMKWQLLERLRRRHGLSWNDPKLRAIDLGWAALD PVRSIFEKVRSRTERTVDDRQVADAAGNAPQTTRAWLRAAVVNRYASQVVAVSWSHLTVR RHDAPQTGEESYGNASRPIVRPSDLCSLDMSDPCAFDKAHMAAFVDGTRNADELITQIGR NITAGR >gi|197324945|gb|DS990229.1| GENE 601 665292 - 666125 922 277 aa, chain + ## HITS:1 COG:NMB1347 KEGG:ns NR:ns ## COG: NMB1347 COG0483 # Protein_GI_number: 15677212 # Func_class: G Carbohydrate transport and metabolism # Function: Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family # Organism: Neisseria meningitidis MC58 # 12 265 10 246 261 81 27.0 2e-15 MDLREMTQAVAQVARHAGRHALQEQVNPHDLSTTMVSPGETKFTSEVNTRLIRYTRARLS EIEPFQGFWEERPEDNQPGERYWCVGNIDGAINFIRNMAEWTVTISLFEFDEHCHARPIM GVVHAPAMGITYMAAKGQGAIRIRRNPVGGDKREKVMPSITATLDGSVVSYGMSYVPEES KRALSAVASIAGKPADIKRVGPASMDLCKVADGTYDAYFEPHLHKWDVPAVSAGAVVVWE AQGRLRQWNGELIHWRRENDVVASNGLIGDELQPYLQ >gi|197324945|gb|DS990229.1| GENE 602 666279 - 666482 367 67 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0657 NR:ns ## KEGG: BBIF_0657 # Name: not_defined # Def: hypothetical protein with DUF797 domain # Organism: B.bifidum # Pathway: not_defined # 1 67 1 67 67 72 97.0 4e-12 MPQEFAHTRSSSQKQDTDEQLNDVSMAAQAETDAAADALDAVLDDIESTLESNAEEYVNS FVQKGGE >gi|197324945|gb|DS990229.1| GENE 603 666482 - 667939 1326 485 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0634 NR:ns ## KEGG: BBPR_0634 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 485 1 485 485 941 99.0 0 MPQLRDSGNHGSWQEARRSSQFQGFARIFGVETEYGVSVTGSDRPVDAAQVAMMMFQPVV SRARSTNTYLTNGSRLYLDVGSHPEYATAEARDPMDALLQDLAGERVMAGLALDAQARLR ASYGDGVNVHVFKNNADSAGHSFGCHENYLVRRYVPLETVEHELLPFLITRQLYTGAGRV TDQGFEITQRADYLDEAVSSATTRSRPMVNTRDEPHSDPDEFRRLHVIIGDSNRSQWATW MKLAVTHLIICVIEEAARLGEDSGFASCALADPGAANRAVSADLTCVTARLRLADGSEPV SAVQMQRRYQVVVRDFMERHHDAVDDALPRTDVDQILSAWSLVLDQLEASDVEALSDRVD WAAKYRLFQALKRRKGEVTDAMRERLDMDYHDIVNGSLYPSMLRRGVMRQLATPQQVEHA VSEPPADTRAALRGAFVAKALSTQCRFSCDWTRLSVMAPERSEVVLLDPFEYQANADVQH LMNLL >gi|197324945|gb|DS990229.1| GENE 604 668102 - 668383 480 93 aa, chain - ## HITS:1 COG:L102317 KEGG:ns NR:ns ## COG: L102317 COG0776 # Protein_GI_number: 15672484 # Func_class: L Replication, recombination and repair # Function: Bacterial nucleoid DNA-binding protein # Organism: Lactococcus lactis # 4 91 3 90 91 66 48.0 1e-11 MAYNKSDLVSKIAQKSNLTKAQAEAAVNAFQDVFVEAMQSGEGLKLTGLFSAERVKRAAR TGRNPRTGEIIEIPATYGVRISAGSLLKKAVTE >gi|197324945|gb|DS990229.1| GENE 605 668516 - 671020 2889 834 aa, chain - ## HITS:1 COG:MT0613 KEGG:ns NR:ns ## COG: MT0613 COG0392 # Protein_GI_number: 15839986 # Func_class: S Function unknown # Function: Predicted integral membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 312 834 2 522 522 131 26.0 5e-30 MNDQTITATSGDDDSKASPDARPMSDDVSGTTAHPVIEDVAPRRIHDFGDLVHAVSAVLL AAVAILSSIYLSGFVTGVESDAHSAGRALNWMVDLPTSMLQQLTIVTIAVMAIVQLLVGR EWLQSALALLAMFGGLATVWGISMAVSTFGNFTLITALCSPSSIIGTGLLPDFYAGSAAL LTVAGPRRTRSTVKWGWNILYVSSAILILLSINSVTGVIVSLSVGRLVGMLIRFAAGTKN QGAWGEDLVQALNGIGLHITSLKRRMDVDLSHGSLASTLDDDLVEGSRLYDAVDDWGRAF VVSALDSQARTAGYVKQLWQWVRFTGVAMRRDRSPREATQHHMAMILGLRNAGLPTPKVY GVADTGETSILVLHGDDIMHECNLNTLSDKDAIALLRFLSVANKRGYTHRRITPDTLARL ESGTPIIAGWQNGDDASAAPNIALDQVQLLLLLAVLIGPERAVTAGRDVLGDDTMISLTP FIQKAAVPAGTRALPGWNKHIVDDMRAEMRALAPQETAEAMEPVSLSRFSPRSFIGMVLL IVAVVVIFTQLKPDEVISAVKNANPVMAIVCLVFELIALLGSALELGAFIERDKRNPLGI FMSQVAQGFAMVSMPAGVGPAFVNLQFLRKSGYRNTTATAIMSAVMAVYYGGTVLMLFVI GIFTGSDALSSMIPTNTLIVIVGIVLMALAVAMMIPPIRHYATDRLLPLVKAYARQLIDV LTNPKELSFSVLGMLILNVATGLEFWAALLAFGQMTNPLETLFIFLVANAIGSAVPTPGG LGGVEAALTFSFGAAGVPAGIALSATLLYRALFYWLRIPLGALSMRWLDKHNLI >gi|197324945|gb|DS990229.1| GENE 606 671073 - 672509 2260 478 aa, chain - ## HITS:1 COG:ECs1603 KEGG:ns NR:ns ## COG: ECs1603 COG0015 # Protein_GI_number: 15830857 # Func_class: F Nucleotide transport and metabolism # Function: Adenylosuccinate lyase # Organism: Escherichia coli O157:H7 # 1 475 1 453 456 394 45.0 1e-109 MKLTDITPAIALTPLDGRYHKQTAPLVEYLSEPALNRERMRVEVEWMILLANGFDGNGNQ PIVEGVEPFTDAEIAFLRAIPEDFGAEGIKQHAAHEAVTHHDVKAVEYYIDDQLDKAPAE LTHINDALKTLVHFACTSEDINNLSTARCVKNAMEQVWTPAFKEIIDHLAAKAEEYKDKA LLSLTHGQPATPTTLGKELAVYVYRLNRQLRHIENQEYLGKINGATGTFGAHLAACPDVD WIAVSREFVTNRMGLTWNPLTTQIESHDWQAELYSTVSHANRIMHNLCVDVWMYISRGVF AQVPVKGATGSSTMPHKVNPIRFENAEANFELSCSLLDTLSATLVESRWQRDLTDSTTQR NIGSALGYSQLALYNLMGGLKSIHPNDIVIERELDSNWEVLGEPIQTAMRACELKGLPGM DKPYEKVKELMRGHEISKEAVERFIDQQSFDPATAARLKALTPATYTGAAGALVDFDR >gi|197324945|gb|DS990229.1| GENE 607 672669 - 674204 1524 511 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0638 NR:ns ## KEGG: BBPR_0638 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 511 1 511 511 976 99.0 0 MNWMVTSSIHGGTQYAPATRERYTAAVASLRNQAKEMKGAGFFWSVAHDQLRKDRAGAAF CPALAGSGGDGEPGHVSMPYARLLEQCVTHARECATLAGDLEQVADLIARAHSLYDEAET KAETKLRKAAQIMTTVLPSVGWNTLGMLSLYGFVSGSIKDGKLNPVRALDATSKMDEELL ASLAGRITNNRIAHILGGTQVAGAAERIAKYTSKFKNAMQGNKLTVREVQSTSQVAGASH SVASSMENLRRLAEERLGKITLNSGLSYATIAVQRYRRSDGTTGWLILIPGTDGQDDSPF GWEQNLELMSSNANRRRNADSFRMVEEAMRQAGIGKDEPVALVGHSQGGIVAAALASDLK DSYAIDHVVTAGSPVANHPIPPKTWVTSIEIEDELVASLDGGRNPSTEQWLTVRGKVTQT TGVTPPTVNADGSCTPGQNTGSAESNYAGALVADAPKTKEISHWLKYHQAAYRNATDLGS PAVDAHERHFQQIIDGELIDTRYYEGRMSHE >gi|197324945|gb|DS990229.1| GENE 608 674201 - 674464 207 87 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0639 NR:ns ## KEGG: BBPR_0639 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 87 18 104 104 130 100.0 2e-29 MASIAGADCPCRTAVGSSRERIGSLQRLTSNALEQSRTAMAAAKNLDWTGNAATLCARAL DRDTRLAASIDDRVRQTGQLAWSGGSS >gi|197324945|gb|DS990229.1| GENE 609 675108 - 675698 818 196 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0664 NR:ns ## KEGG: BBIF_0664 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 196 11 206 206 243 98.0 4e-63 MKSNTVKKREANGREAKDRAVARTPLWSRILIGIVAMACLCAGIAAGANLIAVTAFDDAT SQLNGNLKAASKDDADLSTLSALQQKADARFADAAAWSALLLPQVKDVIDTNASVSATLT ERINAQLQKQQNTETSNAQTAPGSDGNAKQSGGLTQEQRKQVDDLLKSNQQSNSQNGSKG GKGKSSSNTNSTTKPW >gi|197324945|gb|DS990229.1| GENE 610 675725 - 676753 1225 342 aa, chain - ## HITS:1 COG:PA3073 KEGG:ns NR:ns ## COG: PA3073 COG2304 # Protein_GI_number: 15598269 # Func_class: R General function prediction only # Function: Uncharacterized protein containing a von Willebrand factor type A (vWA) domain # Organism: Pseudomonas aeruginosa # 6 325 12 314 340 69 27.0 1e-11 MRPMTFAPALGWIAGGAIAALMLAFAVAVVVVHVRRRRSSDETLTACIRRVIMFLLAAVM MLTPSIVTTTTSRAINATDVMVAVDVTGSMAVKDAEYGSSGTISRLDAAKRIVKGITSTY ADSSFAALRFGASGTLDVPLTPDSIAIDGWADTLAVESTSTSAGSSLDTPLDQLMLSLKS IRDQHPDDIIVLYVITDGEQTSDTARRSYSALRRYLDDSFTIGVGSDAGGKIPMASDGTA TGQQSDGQWVTDPTTGKPGISKLDEATLESIADEMGGSYLHVDASHTIEQAVSAKASRQW RLTQTVKRRERTIPVIWPFAVALGLLLAWEIGAWIAMSRRML >gi|197324945|gb|DS990229.1| GENE 611 676750 - 677823 1030 357 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0643 NR:ns ## KEGG: BBPR_0643 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 357 1 357 357 605 99.0 1e-172 MTTNDMSIHWLWPYAAVAAVLVAAVLVAVIAIFRGRRRPPRDGMPVYSLDDDLNTEHASH LFHLWRLLGRIAVAALVAALAICTVLIARPAHVDRDAERSSSRDIVLCLDVSGSALPYDR AVIETYLELVSHFQGERIALSIFNSTSRTVFPLTDDYDLVSSQLTKAADALRGVESQDDI DKMSDKDYQKIADWLEGTQNRKNSTSLIGDGLVSCAAMIPGFAYGDTSGAARQRPASIVL ATDNVASGTPTYSLAQALDMAEASHISVDGLFSGPRQSEGDATTTEMKQQIESRGGTFLT QSGSSDINELVRQIDSRRTSESRRSSQAALIDAPGWWTLMLVVLLAIWMILAWRLRR >gi|197324945|gb|DS990229.1| GENE 612 677823 - 678395 550 190 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0667 NR:ns ## KEGG: BBIF_0667 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 190 1 190 190 331 98.0 9e-90 MNVMNGFVTSSTLAAAVDVNDLHPVTDVPVASLLPIVTMACFIALLILIVAIVIMSRPRR AKRVAAPRGSHNAFAPVSQWKSRVHDIVERNGAGKLSREDAFVELAAVARDFASQASSAE LGSTTLQEIASRSAGSLASDSGVHGFTLLRQTIAALYPPEFANAEFNAQAKDATVEQAAD WVLNLVERWR >gi|197324945|gb|DS990229.1| GENE 613 678392 - 679381 1039 329 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0668 NR:ns ## KEGG: BBIF_0668 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 18 329 15 326 326 582 99.0 1e-164 MIDGSHPSHSSHSSSSDDRIRRKIEALGNSLSLPTVRKALGVLEGEHASNRRGGNDDPMD IRVYGPGDEARLIDWKASARLGRPMVVQHARQATSQVWLLCDVGEEMTGGCASGEPAYAV AGNALRMFAALSLRRSDDVSLVFADAHSITRMPFNGGFAQFERTLDDALRRDWSYGRNID ALLDYARRIRDRQALIVLATDELALRKRHIDVIGAIAATHPVVLITVATANPFDPSEAAR EWYDGKSGRRIPALLRNAKATEEVALHRRYVCAALEHELAKRGSRMIRAASSDMMFDAFV RLVSRSLGRSIRNQLRVPPSLNLTSEVPA >gi|197324945|gb|DS990229.1| GENE 614 679378 - 680484 1310 368 aa, chain - ## HITS:1 COG:ML1810 KEGG:ns NR:ns ## COG: ML1810 COG0714 # Protein_GI_number: 15827968 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Mycobacterium leprae # 61 368 52 352 377 246 41.0 4e-65 MALFTSKPSMPSQLANAIPTTGAMPAAPMRTPVPAPSAALTQDDLRRARQLTDRIRARFA QTLVGQSNLREALIATMVAGGHILIESVPGLAKTTAAQTLATSVSGTFRRVQCTPDLMPS DLVGTQVFDFSTQRFSTQIGPIHANFVLLDEINRSNAKTQSAMLEAMAEGATTIGGERIE LPKPFMVIATENPIEEEGTFNLPEAQMDRFMMKAVMTYPKADEETSMLAMLTRRGTDMFD PKSLPSDTITIQDVEFLRKSARRVHVSEAIMRYAVDLVATSRGAGNKPLKGLSSTVRLGA SPRASIALIRSGQANALLAGRDYVIPEDVKMMVHEVLRHRVILTFEALADGVTSDQVIDR IVETVHVP >gi|197324945|gb|DS990229.1| GENE 615 680495 - 681250 684 251 aa, chain - ## HITS:1 COG:ML1675 KEGG:ns NR:ns ## COG: ML1675 COG0692 # Protein_GI_number: 15827886 # Func_class: L Replication, recombination and repair # Function: Uracil DNA glycosylase # Organism: Mycobacterium leprae # 7 234 4 227 227 289 66.0 3e-78 MSQHPVKPLSQLVEPGWAAALQDVEPQVHHMGDFLRSELQAGRQYLPASHNILRAFTIPF DSIKVLIVGQDPYPTPGHPVGLSFCVAPDVRPLPKSLVNIYRELVDDMHVPMPANGDLTP WTQRGVMLLNRCLTVGVGRPNSHQGKGWETITEAAIRALNARVDADGKPKPLVAILWGRN AQSLAPLLTNATIIASPHPSPLSASRGFFGSHPFSRANQALVSMGAEPVDWSLPSAQADR PDPHSAVASSR >gi|197324945|gb|DS990229.1| GENE 616 681164 - 681364 70 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MDLRLHVLQRGGPSGLHELRQWFDWMLTHGLYCSERVEAVHIRCMTDGRRALGTPWPVDL TNDTEG >gi|197324945|gb|DS990229.1| GENE 617 681367 - 682113 747 248 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0671 NR:ns ## KEGG: BBIF_0671 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 248 1 248 248 308 99.0 2e-82 MAKDKETYDSYAKDVFDNPPAGPVGVHRGARSAGARMTPFLIVLLVVALAGVGTWGVLSG MFSDVLFGNNGTSQAADDKASDSDDSKTGDTTKSGTGEQSTSSSTDGSSDTASNTSTDSA QSDTTSSSSDGSTDATDTNGQGTDSTASSDAQSTPPATAEANKATSVRVINGTKISGHAA SRAYTLKQAGYKNVVSANPSGTLPASTVVWYQNETDAATAKDIAVTLGISDVRQMSGISA PVVVVLMQ >gi|197324945|gb|DS990229.1| GENE 618 682269 - 682472 415 67 aa, chain + ## HITS:1 COG:L172505 KEGG:ns NR:ns ## COG: L172505 COG1278 # Protein_GI_number: 15672150 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Lactococcus lactis # 1 66 1 65 65 74 60.0 4e-14 MAQGTVKFFSAGKGYGFITSDAGGDDVFVHYSVIQADGFKTLNEGDKVEYEAERGPKGMQ ATKVVKL >gi|197324945|gb|DS990229.1| GENE 619 682462 - 682773 127 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313139894|ref|ZP_07802087.1| ## NR: gi|313139894|ref|ZP_07802087.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 103 1 103 103 194 100.0 2e-48 MVVYPPNGFTVLNLTWGRGVAADRQLPAVTLTPRVLIGRLALSVPECQHIHEDCAVGLKS SRDPRRPEHADTDPVKPKEKEKAPAPIGYRSFDDAQSLARFRA >gi|197324945|gb|DS990229.1| GENE 620 682772 - 684397 1485 541 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|167855908|ref|ZP_02478658.1| 50S ribosomal protein L28 [Haemophilus parasuis 29755] # 2 536 3 536 547 576 55 1e-163 MAKIIAYDEEARQGMLAGLDKLANTVKVTLGPKGRNVVLDKSYGAPTITNDGVSIAKEID LEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAQSLVHEGLKNVVAGSNPIALRRGIE KATDTIVKELVAAAKDVETKDQIAATATISAADPEVGEKIAEALDKVGQDGVVTVEDNNR FGLDLEFTEGMRFDKGYIAPYFVTNADDQTAVLEDPYILLTSGKVSSQQDVVHIAELVMK SGKPLLIIAEDVDGEALPTLILNKIRGTFNSCAVKAPGFGDRRKAMLQDMAILTGAQVVS DELGLKLDSIDMSVLGTAKKVIVSKDETTIVSGGGDKADVEARVAQIRAEIEKTDSDYDR EKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQA AKKAESAEAVTSLTGEEATGAAIVFRAIEAPIKQIAENSGVSGDVVFNKVRELPEGQGFN AATDTYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKAAAPAAGADMG Y >gi|197324945|gb|DS990229.1| GENE 621 684558 - 684851 430 97 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0674 NR:ns ## KEGG: BBIF_0674 # Name: not_defined # Def: hypothetical protein with DUF909 domain # Organism: B.bifidum # Pathway: not_defined # 1 97 1 97 97 97 100.0 2e-19 MPQYQVDSERIQSSSAAVSASIAAIRQAVNGMYTNLNGLQDAWRGGAATQFTSVSAQWRA AQQQMEASLESIQQALTQASTVYADAEAQASRLFASG >gi|197324945|gb|DS990229.1| GENE 622 684924 - 686069 1052 381 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0675 NR:ns ## KEGG: BBIF_0675 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 381 1 381 381 581 99.0 1e-164 MTLRTMRYGKTDDVVEGSAILGVIGVSRDGFSLWKRLFSAVLTVLVITMWITSPGAVAYA AGDDSSSSDQGQATFSQDITDPYNVLGSNLTKVTDAISSTYDSTGVSVKLSYMLHFEGVE DPDQWAQEALDATNPKPNTVLLAVALNDGKLVVAVSGNSESWLYNKTTSDQLLKSAYGPV SGRNPDWSGSAIAMMDSIATIKTTTAQRGTVWKWVGISVMCGVLVVLIVIGVVTVVRRRR DTKGKQPDAEKDAGKSTEKATKKDTGKSAKKRRSKGDAAESDSTAEDDGRPQSASSESDE QSAPSVPMTRRERREASRRGKRFGTSSAATAPKPGNTDEAADEGSRERFDAWLASIVPQD TDGVQETSRTSSQAGNHEQAD >gi|197324945|gb|DS990229.1| GENE 623 686053 - 686790 989 245 aa, chain + ## HITS:1 COG:MT0782 KEGG:ns NR:ns ## COG: MT0782 COG0745 # Protein_GI_number: 15840172 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 6 242 13 240 240 257 55.0 2e-68 MSKPIEASIVVVDDEPSIRELLVASLHFAGFDVATAASGSEAIEVIEKTQPDLIVLDVML PDIDGFTVTRRIRQEGIGAPVLFLTARDDTQDKVMGLTVGGDDYVTKPFSLEEVVARIRA ILRRTREQVEDDPIIRVGDLEINEDSHDVSRAGHAIDLSPTEYKLLRYLMDNEGRVLSKA QILDHVWQYDWGGDAAIVESYISYLRKKVDGIMVTDDNGEQHKVTPLIETKRGIGYMIRE PRVSA >gi|197324945|gb|DS990229.1| GENE 624 686801 - 688750 2167 649 aa, chain + ## HITS:1 COG:MT0783 KEGG:ns NR:ns ## COG: MT0783 COG0642 # Protein_GI_number: 15840173 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium tuberculosis CDC1551 # 71 608 9 467 485 182 30.0 2e-45 MTAQTPPPTGDGTAAGPAPAPGTAPTGTVGTPGTAQIPPPTAAPASQKRATHTKGVWATL KSMFVGRLDAVPLATKIVACTVILLIVGTAGISLTLRQLVGNYMLEKTDTQLFRQAQLVL NNIDTMRQQNNAEKSSSSLLYSYFVQIRDSDDTILRNAIVPTLKDGVSSMPLLPMDGSRG GVQLQQPFTTNAVVTLSGRSVDHSTLSTAESPWRVVALPWTDEDGKPGGVCYIGLSLSDQ LDTVKTLTRYCIIVGVAIVILGALLATLMTQRTLSPLKRIEKTAAKIAAGDLTQRVPPAP ENTEVGSLSVSLNAMLTRIEQSFHEQEETTAKMKRFVSDASHELRTPLAAIHGYAELYKM QRDLPGALGRADESISHIEDSSTRMTVLVEDLLSLARLDEGRGIDITQQVPLTTLVTDAT EDLHALDPGREIRRGTLTFQPRNGDEPADLEFVEGPLPDVTLKGDGSRLRQVVTNIVGNI HRYTPADSPVEISVGVMPASISPESLARMSANDASMRYFIEAVDVSRSMQMGMNYAVVRF SDHGPGVPENSRSKIFERFYTADPSRARLKGGTGLGMAIAQSVVKAHKGFICATDSQGGG LTLTVVLPIAPLEPKIAVGEPPQDAKAERKAERNKAKQEKQQARQHKSE >gi|197324945|gb|DS990229.1| GENE 625 688867 - 689256 481 129 aa, chain + ## HITS:1 COG:ML2147 KEGG:ns NR:ns ## COG: ML2147 COG1278 # Protein_GI_number: 15828153 # Func_class: K Transcription # Function: Cold shock proteins # Organism: Mycobacterium leprae # 1 126 1 135 136 112 42.0 1e-25 MPSGRVRWFDAKKGFGFITNDEGEDVFLPAAALPDGVTTLRKGARVEFSVIDGRKGPQAM GVTLVASVPSLVKATRPKPDDMAAIVEDLIKLLDSAGNELRRHRYPSAADSRKLATLLRG VADSFDVQE >gi|197324945|gb|DS990229.1| GENE 626 689275 - 690348 1202 357 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0656 NR:ns ## KEGG: BBPR_0656 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 357 1 357 357 624 99.0 1e-177 MPETTMPETVVDEPGIADSPIASIDPKDAARAMAVEAAEDENGVGEFVEAIDAGDGITDY RFVSLMRGYEGWQWSVTMFHDVERDTWTVNESTLIPMEQALRPPEWIPWKDRLLPTDLSV TDSIGTDPDDPRLEEGFRATAEAETGDTRVSDARDVEVAGAPGKVDAADEASDTGALDSE APDSEPVESQDAQPTTAAEDVDDAVSAFDLSRRHVLSPLGRAQTAQRWYEGPRGPKSLST KTASGNLCSTCGFFVALQGDLSEMFGVCANKWSPDDGKVVSLDHGCGEHSEIEPPEPSHM WIQSKPAFDDLHIDVIAQAPRDERGEVELIEKLGAAGLPFDVPKGTIILKSQLPETR >gi|197324945|gb|DS990229.1| GENE 627 690499 - 691494 1114 331 aa, chain - ## HITS:1 COG:MT2061 KEGG:ns NR:ns ## COG: MT2061 COG0589 # Protein_GI_number: 15841487 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Mycobacterium tuberculosis CDC1551 # 10 329 2 291 295 80 27.0 5e-15 MTQPDVNIESEPRTSDGAGDIVVGVDGSEESFTALQWALREASLSGRAVNAVYAWTHSWD MGAQPDNPDAWEKASKAITEQLLDWVNEASAGIAFDPDNLKLTSVHASGTTGLLQIGANA QQIVVGRRSLGRVTRWFVGSLSSSLAESAKVPVTVVRIAGNEDKSVQDDIAHSLAPGMPI HHDDDELAAAKGKRPVVVGVDGSETSRHALRFAIDFAALHHAPLQVMFCWQLKDLGEVPG YENAIASIGAGQDHSQDIVRRMIEQADIPDGLQVTGKAFHIAAAKGLTTASRFASHLVVG SRGLSGLDARFLGSVSRQILNFAECTVTIVH >gi|197324945|gb|DS990229.1| GENE 628 691631 - 694207 2407 858 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764771|ref|ZP_02171825.1| ribosomal protein S8 [Bacillus selenitireducens MLS10] # 1 824 2 813 815 931 56 0.0 MFERFTDRARRVIVLAQEEARTLQHNYIGTEHLLLGLIREGEGVAAKALASKGVTLDDTR KQVEEMIGKGNAAPNGHIPFTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVG TQVLIKMDVDLGELRSATIDMIHGNSGGANASGKGDLANAGGVQDKRSQTGSAILDQFGR NLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKINAG DVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAG SADGALGASDMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETI EILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLPDKAIDLIDEAGARLRIKRLT APPELKELDQKVAKVAAEKDKAIKDQDFEKAAELRDNQEKLEAERKEKESSWREGESDVE MVVNEDVIAQVISSTTGIPVFKLTQAESKKLLGMESELHKRIIGQDEAVSALSRSIRRTR VGLKDPKRPAGSFIFAGPTGVGKTELAKALAEFLFDDEDALIRVDMSEFSEKYAASRLFG APPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTLLQVLDDGHLTDGQGRKVD FKNTIIILTTNLGTRDIAKAANTGFNLGSNAESSYQRMKDQVSSELKQQFRPEFLNRLDD IIVFRQLTEPQVRQIVDLDIKQLNDRLFDRHMSLELTPAAKDLLAQKGFDPLLGARPLRR VIQRDIEDAISEKILMGELEDGQRVVVDSEGEGILGEFTFRGEQFDDAKPENEPAAEPAT EESADKSADNAAPASQEA >gi|197324945|gb|DS990229.1| GENE 629 694368 - 694583 89 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSALTILSASCTNTTVTNSFSGEVPSACAIGIAHVIAQAKVMIAARYFLTNTSLCRFPLQ DGIAWWEYERG >gi|197324945|gb|DS990229.1| GENE 630 694567 - 694782 230 71 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0682 NR:ns ## KEGG: BBIF_0682 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 71 1 71 71 131 97.0 1e-29 MVSADIPAQYVQEYKNRLKNEKFKAAEIAEATGSEISLMTTTANNPLKPTVTYFRKSSCF MQFIWPVVCHT >gi|197324945|gb|DS990229.1| GENE 631 694758 - 694985 228 75 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0660 NR:ns ## KEGG: BBPR_0660 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 75 1 75 75 109 98.0 5e-23 MAGGLSYLNVTNGLFMIAIIVFAGLLGLLLSMMMRRQQTREQAHERMLERERQEHHAQTL DYATQVHDSGGRGIR >gi|197324945|gb|DS990229.1| GENE 632 694999 - 695136 63 45 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0684 NR:ns ## KEGG: BBIF_0684 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 45 1 45 45 76 97.0 3e-13 MGDFIEQLAKQRHMIGVDVFHESIVVQREPSMESLAGKLFSKSVT >gi|197324945|gb|DS990229.1| GENE 633 695185 - 695388 255 67 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282747|ref|ZP_03646069.1| ## NR: gi|224282747|ref|ZP_03646069.1| Signal transduction histidine kinase-like protein [Bifidobacterium bifidum NCIMB 41171] # 1 67 30 96 96 132 100.0 1e-29 MLHDDVAEVTQYNSVTHPADKSETAVSTHMGLGLCRDRLLHIGGMLRTEVEDGTWMLYAR VPLSHQT >gi|197324945|gb|DS990229.1| GENE 634 695551 - 696972 2041 473 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0685 NR:ns ## KEGG: BBIF_0685 # Name: not_defined # Def: hypothetical protein with DUF349 domain # Organism: B.bifidum # Pathway: not_defined # 1 473 1 473 473 597 99.0 1e-169 MADETATISDNTTEPTEQATTPTPAPTPASAPKPHAPSPAAFAKKAVKRPAPAASASSYS DAEVKAAEAFGRVDDNGTVYVREGDSEREVGQFPDVSKEEALSLYARRYLDLKAKLDLLA SRLHSDTVKSHEIDETLKSLEQETDKPAAVGDMAALKQQFEQLKEAGAAKKAELTKARKA AIAKAVEERTKIVEKAEALASSLDDEINWRSTADKFRSLFDQWQQHQRTSVHIDKPQADA LWKRFSAARTTFNQARRKWSQARDVERAHAKAEKEAIIAEANQLKDSTAWGETSRRFNEL MDRWKRAGRVGRSDDDALWAQFRKAADEFFNARQADRDQISTSEKENLAKKEELLKKAEA LVPVADEAAAKKARQALGAIQDEWDQIGYVPRDDMRRIEGRLDAVDKQIKAVEDAAWKKT DPEADARKSSFEEQLTAQLAELDEKIAAESDPKKKAKLEAEKATKEQWLNAIK >gi|197324945|gb|DS990229.1| GENE 635 697061 - 698455 1941 464 aa, chain + ## HITS:1 COG:XF2222 KEGG:ns NR:ns ## COG: XF2222 COG0124 # Protein_GI_number: 15838813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Histidyl-tRNA synthetase # Organism: Xylella fastidiosa 9a5c # 1 448 1 449 466 248 38.0 2e-65 MAKGASISGFPEWLPSERVVEQRVIDTLRRVFELNGFIGIETRAVEQGSSLLKKGETSKE IYLLSRLQEVGHESDTPVNDRLGLHFDLTVPLSRYVVEHSGDLAFPFKRWQIQKVWRGER PQEGRFREFVQADIDVIGNGDLPDHYEVELPLVMVSALEELRAFGLPKATVHANNRKLSE GFYRGLGLTDIEGVLREIDKLDKIGADEVAKLLVDTCGADEAQARACLELAELTAADGKE LADKFDALCAAHGIADDSDAYALARQGLDTLAMIVDEAALIRPGAVIADLKIARGLDYYT GSVYETFLDGAASLGSICSGGRYDNLASQGNRKYPGVGLSIGLSRLVSYMLHSAGAHASR VCPASVLVAVWNEQDRSAANLIANTLRSRGIAADVAPTAAKLGKQIKYADKLGIPYVWFP AGATDGDDTASDEVKNIVTGDQQPADPKSWQPDTVYARQTVVID >gi|197324945|gb|DS990229.1| GENE 636 698539 - 700335 2475 598 aa, chain + ## HITS:1 COG:Cgl1597 KEGG:ns NR:ns ## COG: Cgl1597 COG0173 # Protein_GI_number: 19552847 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aspartyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 7 594 3 590 608 739 61.0 0 MSQTAYRTHHATEVTEALVGQKVTLAGWVDRRRDHGGVAFIDLRDNSGLVQIVIYDEEMA RPLRSEFVIQVTGEVRLRPDGNENTHLATGKIEVVVETIDVLAKSDALPFQVSTALENES ENKLPGEDVRLKYRYLDLRRPSMQHNLKLRSDMAKAARHALEEMDFTEVETPTFIKSTPE GARDFVVPARLVPGSWYALPQSPQLLKQLLMVSGVERYYQLARCYRDEDFRADRQPEFTQ LDMEMAFVDQEDVMAMAEKVIAAIWKSAGYDVQLPIQRITWQDAMDKYGSDKPDLRFGNP LVELTEYFKDTPFRVFQADYVGAVVFKGGAATPRRQFDAWQEWAKQRGAKGLAYVSFTED GELKGPVAKNLSDSEREGLMAAVGAESGDAVFFAAGSRESSQLLLGAVRVELARREGLLD PKKFAFTWVVDFPLFKPTDDPDDDDVAVGHSKWTSMHHPFTMPSKDWIDKFDQDPEHAMS DSYDIVCNGEEMGGGSVRIHRDDIQDRVLNVLGIAPEEAKEKFGFLLDAFKFGAPPHAGI ALGWDRTVSILAGADTIRDVIAFPKAGGGRDPLTGAPAPISDEQRAETGVDYDPDAED >gi|197324945|gb|DS990229.1| GENE 637 700720 - 701184 239 154 aa, chain + ## HITS:1 COG:SA1666 KEGG:ns NR:ns ## COG: SA1666 COG2197 # Protein_GI_number: 15927422 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Staphylococcus aureus N315 # 1 146 53 197 207 65 32.0 3e-11 MLDMPLTDIPGPEICRRARAASADIMVLGITSYSLDHYRQLAIDAGAQGLIAKSVTPKEL AEAMRNVLVRPFPGFPTTERAHGSIVSASARRPRTLSKREREVLGLYADNYSTAEIAERL GIADSTVSVVVRHAKVRLDVAARSEAVRVFRALY >gi|197324945|gb|DS990229.1| GENE 638 701289 - 701768 526 159 aa, chain + ## HITS:1 COG:PA2301 KEGG:ns NR:ns ## COG: PA2301 COG2606 # Protein_GI_number: 15597497 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pseudomonas aeruginosa # 50 148 73 171 180 72 37.0 4e-13 MRVMQRPHDDGAQRLCFRFLQQPCVEVMIDTHDRVGEIVGDSVVHTHKTRKAPPEFAAAF VTADTHADLNGVVKHTLEVSKVSFAPIDAAVEATGMESGGMSPIGLPDDWSLLVDQHVLS IPKLYLGSGIRPSKLVVDGSIFADIPGVRFVPGLGKPRQ >gi|197324945|gb|DS990229.1| GENE 639 701863 - 702663 271 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 41 248 147 352 398 108 34 6e-22 MSEKQEAILPVVPLVPGNEPTGRPLVELTHVEKYFGDLHVLKDINLTVNKGEVLVVVGPS GSGKSTMCRTINRLETIESGDIRIDGKALPQEGRQLAQLRAEVGMVFQSFNLFANKTILE NVTLAPIKVRHMDKKEAEHLAMDLLTRVGVDSQASKMPSQLSGGQQQRVAIARALAMRPK VMLFDEPTSALDPEMVNEVLDVMVELAREGMTMICVTHEMGFARKAADRIVFMADGQILE ENTPDEFFGHPKTERAKDFLSKILTH >gi|197324945|gb|DS990229.1| GENE 640 702679 - 703518 1342 279 aa, chain + ## HITS:1 COG:Cgl1906 KEGG:ns NR:ns ## COG: Cgl1906 COG0834 # Protein_GI_number: 19553156 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Corynebacterium glutamicum # 9 257 4 273 295 199 45.0 6e-51 MTVFNTRIRRIARRALAALAAVACAMSLAACGADESGKIRIGIKFDQPGLGFKKSGTYVG FDVDVAKYVAKKLGYSEDEIVWKEAPSKQREAMLQNGDVDMILATYSITDERKNAVSFAG PYFVAGQDLLVRKDDHSINGPEDLNGKRLCSVTGSTSAATVKKKFASEVQLMEQPGYAEC ATALFSGIVDAVTTDDIILAGLASASRGKLRVVGKPFTQEYYGVGIKKGDTALAKKINAA IAEMIKDGSWERAIADNTEGTSYTPNAEYNPPKPTEGEK >gi|197324945|gb|DS990229.1| GENE 641 703520 - 704197 1114 225 aa, chain + ## HITS:1 COG:Cgl1907 KEGG:ns NR:ns ## COG: Cgl1907 COG0765 # Protein_GI_number: 19553157 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 16 225 15 228 228 164 47.0 1e-40 MDGFIQLFSEYDVPAAFLVNIELTLWSALFSLILGVVLVMMRISPISSLRTVAGAYVELF KNLPLTIIMVFMVLGAYAQLKLTFSDTFATNFFWLSVTGLSLYTAAFVCESLRSGINTVP IGQAEAARALGLGFMQSATQIILPQAFRGSVAPLGNTLIALLKNSTVAAAASVATETSSL MSTMIEFHPDVIVQIFLIFAFGYVILIIPIGMLTTYLSNKLAVRR >gi|197324945|gb|DS990229.1| GENE 642 704202 - 705290 1402 362 aa, chain + ## HITS:1 COG:Cgl1908 KEGG:ns NR:ns ## COG: Cgl1908 COG0765 # Protein_GI_number: 19553158 # Func_class: E Amino acid transport and metabolism # Function: ABC-type amino acid transport system, permease component # Organism: Corynebacterium glutamicum # 1 295 1 300 315 187 36.0 3e-47 MADTSNSVLFDQPGPKGRRAIRIVNWVAALIFVGVLVLILMRLHNPPDGENQLSWELWKP ALEREAWTDFYLPGLWMTVKASIVAVVGSVVFGLVFGVGRLLPNVVLRAISSVVVEFCRA VPVLLLMIFFWRWFAFAGLSSPSYWAVVLALVLYNGSVVAELVRSGVGNLPNGQREASLA LGLTETQSLMQIEVPQAVYAMLPAAVTQLVVVLKDTALGSIIMYTDLLQESRRLGSMYFN ILQTLVVAAVVYFIVCWLLSRLAEWLPSRMQQRTAAPAEPEPVPPIAIMDPSNVNQIAVA KEVEERPLRGTPLTYHVHHRGSNASIHNWQRTRYEQGFDEAHPDPQGGDEDDAEQKNAED DA >gi|197324945|gb|DS990229.1| GENE 643 705459 - 706496 1185 345 aa, chain + ## HITS:1 COG:all2088 KEGG:ns NR:ns ## COG: all2088 COG2326 # Protein_GI_number: 17229580 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Nostoc sp. PCC 7120 # 90 329 19 268 289 199 38.0 9e-51 MAKGDGKSDKTDKPDKSGKGAKSEKTDKRIDKVLRLATNRIETIESSTTVAERLANAAKS SELLSAVWSLPPAQRLMFHHGVHIDDVAGDSTPGFPGGRDDAERFITLSSSEIARYQRLL YANGVKGSRRRLLIVLQGMDASGKGGIVRHVFRQGDPMGIHYHGFGKPTDEEARHGFLWR VERELPKNGWIAVFDRSHYEDIVMPHVYGTYPEAEWCGRYDLVNEFERSLAADGCAILKI FLVVSQEEQKRHFLGRLNDPTKYWKFDMSDLDARERWDDYMGAWQEVFEKTSTQTAPWYL VPADNRWYSRAVVSELLRTTLKNMNMTWPGLDPDVDPDEVRRLLG >gi|197324945|gb|DS990229.1| GENE 644 706554 - 709115 3720 853 aa, chain + ## HITS:1 COG:Cgl1878 KEGG:ns NR:ns ## COG: Cgl1878 COG4581 # Protein_GI_number: 19553128 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Corynebacterium glutamicum # 9 853 6 850 850 744 46.0 0 MADTEHYGSLGALAPAWDEGERNIDTDEIYERFFGWVADVKGVEPWPHQEEAIMDLLAGD HVILNTPTGSGKSLVALGMHFAALCTGRRSYYTAPIKALVSEKFFDLVEVFGRDNVGMIT GDTHINADAPIICCTAEILANQALREGRRADVGCVAMDEFHYYGDSERGWAWQVPLLTLP DTQFLLMSATLGNVDAIADKLEDMTDTDVDVIADAPRPVPLTYEYTLDPLEKTVELAFRK GETPIYVVHFSQDAALDTAQSLASTGVSSKEQRQAIAEAIKGVKFTTAFGKILQRLLRTG VGIHHAGMLPRYRRLVEQLAQQGLLPVICGTDTLGVGINVPIHSVVLTALTKFDGTKMRR LRAREFHQIAGRAGRMGFDTEGLVVAEAPEYEIENAKAVAKAGNDPKKLKKVKRKKAPEG FVTWNQSTFDKLIDAAPETLVPHMKITHSMVLNEVTQGGDARRRVDELIDDSAQTPDQKE HLHERADEIFQTLFDTKVIETEERDDGGLDYFLDVDMPDDFALDQPLSPFLLAALELLDP ESDMYALDVISMVEATLEDPKQVLRAQERQARDAAMIRMKEDGLEYDERMDRLQEITYPK PLEDMLDAAFDQYRHDVPWANDYWLSPKSVVRDMVETASDFTGYISRYNIARSEGTLLRY LSDAYRALARTVPDDKLDDQLRDVISWLRVVVRSIDSSLVDEWENAGASDDASQAAASLA APGAKAAVVEDRRGLTVLIRNALFHRVQLMDLDKPETLGALDKEWGYGVHEWEDALDDFY DEHEYVNTDAKARSAELFMLDEKHENDEHSWHVRQIIDDSDGDHDWAITGTIDLDATQSS GEVVFFDYAVTND >gi|197324945|gb|DS990229.1| GENE 645 709102 - 709215 59 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPTLYNTASNIGSIPDGPPPVASRQPPLAGAGGVSRW >gi|197324945|gb|DS990229.1| GENE 646 709214 - 710620 1549 468 aa, chain + ## HITS:1 COG:ML0510 KEGG:ns NR:ns ## COG: ML0510 COG2256 # Protein_GI_number: 15827173 # Func_class: L Replication, recombination and repair # Function: ATPase related to the helicase subunit of the Holliday junction resolvase # Organism: Mycobacterium leprae # 19 451 52 468 473 416 54.0 1e-116 MTENDLFGAADVPDDMTRPLAVRMRPRTVDEVLGQSHVLGEGSPLRRLANPSSKGSLTAP SSIIMFGPPGVGKTTLATIVARQSGRAFEELSAVTSGVKDVRDVLALARRRLVGDGTETV LFVDEVHRFSKSQQDALLPAVENRDVTFIGATTENPSFSVIKPLLSRSVVVKLESLEPSD LVTLIARAVEDKRGLNGEVKIDDAAVNEIVRMAGGDARKTLTILEAAAGAVTGDKARRKG ARRPTITPDVVSQVMDAATVRYDKDGDDHYDVISAFIKSMRGSDPDAAIHYLARMLRAGE DPRFIARRIMIAASEEVGMAAPQILQVTVAAAQAVAMIGMPEARIILAEATIAVATAPKS NASYNAINQALADVDAGLIGQVPLYLRNAPTALMKSWGNHDGYRYAHDWPGAVAPQEYLP EELRGREYYHPNDRGYEHEVSQRLDKVRSILHSETAPDGYTESKEQNG >gi|197324945|gb|DS990229.1| GENE 647 710590 - 710790 123 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKSIQTDASCFRTALTIPTLRQATLQCNGLPDEGGVAVAMNYSQPRYRSATPPGGAIYPF CSLDSV >gi|197324945|gb|DS990229.1| GENE 648 710794 - 712260 1685 488 aa, chain + ## HITS:1 COG:L184818 KEGG:ns NR:ns ## COG: L184818 COG0477 # Protein_GI_number: 15673330 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Lactococcus lactis # 13 482 9 453 454 220 34.0 6e-57 MTSTSQERIPKRLIGAIVAVGSLAFIGILTETVMTVLFPELMTEFGVNTATVQWITTVYL LVVAATMPLSSFLNRRFRLKSLFIAAVVLAVTGSAIMIVGHTFPVILLARVIQGIGSGVA TPLMMNIILEQSPRSKVGRLMGVGSLVITVAPAIGPTVGGAVSSVLPWRAIFVIAIPIVL LVSLPLGLHCIEQKRPTEDARLNPVQFVAIVLALSGMILALNQMGVAVSAAVNGSSATRP VIITVVSLVVGVGSLVFFGWSSSRSFSPLIRLGWLRDRVVQLHLLAYLILPIVGIGFGYV ITNLAQMSLGTSAFHAGVLVLPGALVGAFFAPVGGMLYDKFGPTKPILSAISVATFGPIL LLAFSMRLTPALLAGFYFIFGLCYALGFSNIMTSALSGIDHAFMPDGNAVFNTALQFGGA VGTALFSMILGVAQAGAGSAEKGSAAFRHATAVGGTWMFATMTVICLIAICSLACAFRIR ASRTAAER >gi|197324945|gb|DS990229.1| GENE 649 712285 - 714750 2028 821 aa, chain - ## HITS:1 COG:CAC3102 KEGG:ns NR:ns ## COG: CAC3102 COG1122 # Protein_GI_number: 15896353 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Clostridium acetobutylicum # 19 232 24 231 281 182 43.0 3e-45 MVPAARLEHVRFSYDNGVTWVLDGIDLTIRSGERLCLVGPNGSGKSTLARLIAGLAAPDG GDMTLLGHHVFDGETASANPSEYRDARHGIGTVFQNPEDQIVTTIVEDDVAFGPENLGVA RDDIGGRIDESLQSVDMAGFRHADPTRMSGGQQQRIAIAGMLAMNPRMLVLDEPTAMLDP DARIEVMRILDMLQRRGTTIVLVTHHHDETMHADRVLRIDGGLLTQVEADRDAIAAKQVI ARSHADATDAAGSTESAAEEPGGSTAAASPAQPAKSGQPVKPASTKSDASPIPPTGSASD AIAVSGLSYRYDDGDAPVFENLSLRVAEGEIVALMGSNGAGKTTLARLLCALDRPSAGSI TVAGLPVSSSKHGKRPRALTRKERAALRRNVGYVMQHPERQLFADTVAEDVAYGPRNQHL SELEVATRVEEALRMLHIEHLADRSPFNLSGGQQRLVAIAGVIACRPRVLIMDEPTASLD ESAVSRIHALLGSLKSQGVAVLIITHSIDEAEHCADRIITIGSHNGDGEGDGCGTGDDGD TSVGDATESSTNAGKAGIESIEDGSRNRPSFVASLDPRAKMVTFLTLMFTAFVITRPAQL AMGAVLTACVVAAARLHPLRLLSSVRVFLIVFAVMGLVNMFFARSGETLAHIGPLPITTG GLMVAVLYSCRLALVIILGAVFLATTTPTAMTDAFGSLLLPFRKIGWHTQEVALVMSLAL RFLPTLSDETKAIIDAQSARGGTIETGSPATRVKALFAIIVPILVAALRHADNLSLALDA RCYEEGIHRTHWRVMRARRRDLMVAAACVAYVVALLAVGWL >gi|197324945|gb|DS990229.1| GENE 650 714927 - 715547 763 206 aa, chain - ## HITS:1 COG:TM1455 KEGG:ns NR:ns ## COG: TM1455 COG3601 # Protein_GI_number: 15644204 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Thermotoga maritima # 36 204 3 171 183 92 37.0 5e-19 MSVSSQPNSADSSNAAKPTRPDLAHSTGVADSGRWSTRRIAMYALFVALAMATSFISFPI LPNPAFSFLKYDPSGIVCLIAGFAYGPAAAAIVSVLGFVPHVFMDPWGTLMAVLVALTLS VPAALIYRHVHTRKGAVIGLVVGALLALVAAIAGNLVITPIYTGWPVSEVAAIIVPALLP FNLIKFVIHGVVTFLVYKPISNLLNR >gi|197324945|gb|DS990229.1| GENE 651 715922 - 716683 1201 253 aa, chain + ## HITS:1 COG:Cgl1864 KEGG:ns NR:ns ## COG: Cgl1864 COG1940 # Protein_GI_number: 19553114 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Corynebacterium glutamicum # 4 247 2 241 250 230 50.0 2e-60 MIDTAQAFGVDIGGSGIKAAPVDLNKGEFAEPRLKILTPSESTPQAIGSVLRKQLEHFEI PETAPVGISFPAPVKPGQKLNWIANLDQSWVGVDITEALSEECGRPVTVVNDADAAGLAE QQFGAAKGQEGLVVVTTLGTGIGTALIYDGVLIPNTELGHIELEGGKGDAERYASSAVRE RKELSYKKWAKRLTKYYSLIEKYFSPSLIVIGGGVSRKSDNFVPFIDIDTPIVPAKLRNE AGIIGAAYYASTK >gi|197324945|gb|DS990229.1| GENE 652 716665 - 716856 89 63 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPSHRQCVSAAAMGLGSLRSTREEKRTPLPYRDHASCIAGTMVGQGVACECMCLCPLRYL VLA >gi|197324945|gb|DS990229.1| GENE 653 716777 - 717967 1403 396 aa, chain + ## HITS:1 COG:SPy1779 KEGG:ns NR:ns ## COG: SPy1779 COG0436 # Protein_GI_number: 15675619 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pyogenes M1 GAS # 83 380 91 388 404 98 25.0 2e-20 MRFSSRVDLSEPNPIAAAETHCRCEGMPLGKLNDSNPTRHGLAPALVPGTYTADPRGPRP AREALASFLTELHRGAEGAGTAPAADPNRLYLLSSTSQAYSWLMKLLCDAGDAVLAPKPG YPLIESIARLECVDTIEYQLRFDGSWYIDVAELRALLDGPQGARIRALVLINPNNPTGSY VKAGEREQLVGLCRERGVAIIADEVFYDYALEPFPGNARLAGEAGALTFALDGFSKMLAA PHAKVGWIQVSGPETDVREAMRRLDVIADDYLPMSDIIASRIPDLLEAAKVQTDLVRGRV QGNLRALHRMLESDPLGVVSVLRAEGGWNVLLRVPGVIDENELVLHMIDAHGVSGQPGYF FDMASNGYLAISLLPEPDEFAHNVRVVLDSVAELLG >gi|197324945|gb|DS990229.1| GENE 654 718092 - 718880 882 262 aa, chain - ## HITS:1 COG:CAC1368 KEGG:ns NR:ns ## COG: CAC1368 COG1122 # Protein_GI_number: 15894647 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, ATPase component # Organism: Clostridium acetobutylicum # 21 243 5 221 279 98 30.0 2e-20 MGLFDSLFGKDEALPSQVTFTLDQAGHTYEDGSVGLLPTSLTITPDDRRVAVIGLNGAGK TTLLKLLDGAFAATSGSVSITAGETALSPAVKRDLKRIEDIVGRVRREEIPDSYYRAATI REAIEQPLKKHKVPESERLAIVGNLFAHFGLSTVARQSASSLNSEQRHLLAIASALSFSP AAIVADEPTKGLDEIGSAHVAKALFGYNKQVIFATHDVDMITRPQYAIDRALVVDDHTVV FDGEPAAAAAFYEDLIRSKVAR >gi|197324945|gb|DS990229.1| GENE 655 718973 - 719392 533 139 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0703 NR:ns ## KEGG: BBIF_0703 # Name: not_defined # Def: hypothetical protein with arylsulfotransferase domain (ASST) # Organism: B.bifidum # Pathway: not_defined # 1 134 1 134 174 248 97.0 5e-65 MWFSASTKHFVGMNRFGKLEKIIDLGDRFILHHDYALDDDGNIVSLATDLTRYDHAVQDQ AIKVNTSTGKVTKLVDFGEMFPDYKASTDHSGIDESDPTASGRWDWIHFNTIHLLPDGQY YIYMFDNDFGYAKTIARRP >gi|197324945|gb|DS990229.1| GENE 656 719562 - 721754 2528 730 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0683 NR:ns ## KEGG: BBPR_0683 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 730 11 740 740 1346 97.0 0 MRRSLPAMLVALLAILVIECVAFNMPFWTTLGASTDSAAATNVMGDGLKRGEDGILTVTD PTSAYMEVSADGTSSYVRIEAANTPEGGDVKAANNVFVRADTDSRAGEITSVSTSAPRSL YLKVKPGSSVRLWIEEPVGSRIPFSAVRANVRVPFEFSWLRVSIMAAVALLVALWRPGSA LWRIRLNPASVRQRWALVAFLAPLAIYTMVRIVGEFLVSGPLVFPNPHGYTYDFDQYDHV AQSLLNGRVWLDLPVSPELAQAANPHDILVRGQLFESGKTQIFWDYAFYDGHWYSYFGVV PVVLFFLPFRAITSLWTPGGMMLPTSVCILLMMFLFAVFACLLVIRLTHRLCPNASVAAT SIVIVMFLLGSNASYLHFRLNFYSVPFAASLMFTTLGLWLWLKATPERHPGRREHVHVGS WSVAGAQPLSLRYLAAGAACIAANFGCRPTFALSALLCFPIFWPQITSLLQGLRSRSLPP RRALRAPAAVIIPALIVVLPLMAYNVARFGSPLDFGNDYQMTVTDMTRFVQPTANFLPSV GAYLFLPLRFTSEFPFIGVTPMAFREWGYYEPMAGGLFTTCPLLLLALAAPFLRRRMHRS GYWGLATCSLALAMLLAVFDSHTAGLGWRYICDFGWMMAIAALAPMLYLMHPGGDAIAAG APDPSERNEPRRDVTKRHPMALACVRGLVVAVLMASIILAVLACFIPGRDDSLINNNPVL YDTVVAWFRL >gi|197324945|gb|DS990229.1| GENE 657 721835 - 725314 3536 1159 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0684 NR:ns ## KEGG: BBPR_0684 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 1159 1 1159 1159 2162 99.0 0 MFRNASHFPSEGSLGGLISGLSGALRQVGDAAASVLGGRGVRMDEDGQGPFEAAVQAAAG SGNDTDAMMAALSKHSVRLTPLIKRRVFPDLPGVPRGVALGWAQLTSGEGATVSIGLFIG HDRFSQIALADGNGRVFVTSDPHADTHDMKPRFMLVKEEELDAVDGARFGAKARPPSAVT GASTGESAGTVRAFQGGIVGRDATGRMTWLASWLKTGNRYTLEQMRSPLPASLRQRLEYR DAISIAFLAAYMLPEMRGLLIGFGSGNIFRRLNREAPMGAIRRSIRDTMEARAHGMRASG LEDHFADLMQEAGALDHASGLEAVHGAEPLHLYTSSYSGGYFFAWDSGLEFRAALRSLRI EGNLNRFAAVSAWIERSARNGGVTEDTVTRAQAAQIDLALLDDPALMALPWEGNPAISGI DFPHDDGVAAIRHVWRYAGETADRMLQDNPNPAGGRLGSDPGASEWVYRQAVSRLLRQLR LPYRFDMEFRSNLEQGTTAVAFTTAGPSMMPESRYDERAHDWVSFSQGERAAMSAAYNLR VGLIIAALCFGASERVDQVCVRIDSIGLEEAVAEQDSAISDLMSAALRSFERLHTGDAGA SKADPKDGDHHGDPSHTPSAEPAPDARTPQADARGTQDAKTDSAGESVSATVGDDDLQSL ESFADMMKDINFEDFVRDSPQEVQDSDSGDTGQADDAGAAPGGEGNEEGDTDPMDALRRS PTVRNLVTVTFTRQELLQRLREDALRHPADTYRLFGAVMDIDERGGLAPISAEFDLRDAR FSPTGSQEEPELSDKVFPATVAGILGTDNAEGLSIQRADLLQRCVDEFHRLAADGTLASV SKAQHAMHVIDRVADPELSELSSRVTSALIDGTDTPDFTFQLADELDRERTRARDLLFSG QDDQAVTVAEAAIERVESAYADNPGVPRYFNSYAERVVYNRLFATDGERTVLIPDNLFYA HTELADLLSQLKGAKAALPHLNAMVAYAPAYPFSHMKLAVQLARNEDWDSARAACLNALR VALDRDDAAFAYYRLAYAEWMRDRFDIAAAAYIMSEHIAPGQIGALDGELRELLARAESQ CIAVPTDVESAAGVLRMHDLPVWPHTQVAAIVRDAARVCVDEGMFVPARTLSMAAARMND GDNGGVDMVQSQFLRSLNS >gi|197324945|gb|DS990229.1| GENE 658 725401 - 728103 2676 900 aa, chain + ## HITS:1 COG:MT3094 KEGG:ns NR:ns ## COG: MT3094 COG0272 # Protein_GI_number: 15842572 # Func_class: L Replication, recombination and repair # Function: NAD-dependent DNA ligase (contains BRCT domain type II) # Organism: Mycobacterium tuberculosis CDC1551 # 74 546 3 461 679 486 55.0 1e-137 MARAAVSQSSGDQLAWDFDDPDAGEAPAPVENEGASRFAPGSSQWVAALQSTDADAARLD RLDVSSLSNEVAARLWARVAAWVEADQIAYYIDDAPVSSDAAYDARLRCLQRLEAEFPSL DSPQSPTHRVGGTFSNDFASVRHPSRMMSLDDVFSIEELRDWYDSVLRDLDWPEGKPLPM TCEVKIDGLALNLIYRNGVLEQGLTRGDGVTGEDITLNVRTIGSIPANLGGPAADIPEFV EIRGEVFMRWDDFKALNGEQEDAGRPPFANPRNAAAGSLRQKDPRITATRRLSFYAHGIG TLRWGSGRPAGSHDVVADQSEAYTLYSKWGVPVSPHNREVTSFAQILDMIDYYGEHRGDI EHALDGIVVKVDDLGLQRSLGATSRAPRWAIAYKYPPEEVNTELLDITVQVGRTGRVTPV AVLKPVYVAGSTVSRTTLHNPFEVKRKGVLIGDTVVVRKAGDVIPELVGPVVERRKGRED DLREFVMPDRCPSCGSKLAPAKEGDKDIRCPNVESCPAQLTERIINLASRKAFDIEHLGD QSAIALTNPEENRPDSPDTFAPNITEILVKPGEEPEPYEPVEGLRLPERQKPVLSSEAGL FTLDAAALRDVRVWREAAIIEIHETVTADGKTKRTRKRIGGSGLWHQVPAFWTAPTPAKK LSARRQAAAGAPADAAAEPYPGYDVPADAVVVRVDRKTTRNGTVDVPVYVRPGENTRKMF DEMDKARHADLWRVLVALSIRRLGPPTARLIASAFGSLEAIEQAGVDELSAIDGIGPEIA ESVVNWFAAAREPRDWRGETLRAWQAAGVGVAAAETSTLPQTLAGKTVVVTGSLEGFSRD SAKEAIIERGGKAAGSVSKKTDWVVVGENAGSKAAKAEELGIPMLDEAQFRTLLETGAVQ >gi|197324945|gb|DS990229.1| GENE 659 728330 - 729454 1388 374 aa, chain + ## HITS:1 COG:ML1080 KEGG:ns NR:ns ## COG: ML1080 COG0489 # Protein_GI_number: 15827530 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Mycobacterium leprae # 3 370 7 364 383 290 44.0 4e-78 MTDARHIEAQIYERLSKVIDPELGRSITDLGMIAAINAVGVTSQGDMPSYDVTVHVELTV EGCPLSQTITNQINGAIVSYPDAKLTPHIEVSSMSHDKLADLVAGLKAERKQNPFNKPGV KTRIFAIASGKGGVGKSSVSANLAATFAALGYDTAAIDADIYGFSLPKLFGVHTQPTNLN GMLMPVTAWGVKLISIGMFAGADRAILWRGPRLQRSLEQFLSDVWWGDPDVLLLDLAPGT GDMAISVAQALPNAELVVVTTPQPSASDVAVRSGLVALQVPMKVRGVVENMSWYEHKGER LEIFGAGGGRRVSDQLTETLGYDVPLLAQLPLDPDLREVGESGRPAVLNEDGALRSDALG RTFRELAEGLLRSE >gi|197324945|gb|DS990229.1| GENE 660 729582 - 730415 651 277 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0687 NR:ns ## KEGG: BBPR_0687 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 277 34 310 310 552 98.0 1e-156 MGFMNTDIVNGRRNERKRCNEAAMRTKRPLRVGYINAIRYWGAPVPKTNLASNRVHVSVP RAQDRNHIAGVTFHVFSGKEEYCKYEYERFWMASPAMAWAQMATYCDTEALATIASAFAS REERRKKARKDDFAAYLDASPRFAGKRKCEEALPYIVEDTDSPPETPLFGILLDSGLGRP YANYRVRLRHGTRLIDMAYPDCKVGFEYQGAYHASPEQMRKDAARFNELQHNGWTIIMVT ADDLRTEESRRAFIEMVRDIVNRQRYLHYWLAANGSQ >gi|197324945|gb|DS990229.1| GENE 661 730303 - 730545 162 80 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALIYPTLSGLLVRMAASLQRLRSFRRPLTISVFMNPMGQRYGMECTDGKRFRGMWSKAR HFWHVFGVLSTFHVSANGSH >gi|197324945|gb|DS990229.1| GENE 662 730981 - 732273 1489 430 aa, chain + ## HITS:1 COG:mlr0475 KEGG:ns NR:ns ## COG: mlr0475 COG0582 # Protein_GI_number: 13470699 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mesorhizobium loti # 42 430 6 390 399 79 25.0 2e-14 MPRYTLTLIDSTNQTPPIVLTAESTRTIIRQLTKRLDPTPERRRVQGSGGFTMERGRVKA FRELPPDPATGNRRRATAFGATRAEAERRLNEKIAELQRVGRLGYTKPPTVAEWCDHWLN DICKPHLKPRTWGTYASVIERNVKPAIGAVRLDELKPAHFRRMERYVMEEQGKSSGTAGS AWRTLHKALEDAVLEGVIERNPAVKGTAPRVALKERAALTPEQAADLIAAETDDTWRLMW MLAFMTGMRQGERLGLTEDELRRDGDRLIILVEWQAQHLTKREVEGLPKGVECTPLGNGM YRTRPKTEKGRRAIPLPEALADQLLAHIERHGVNGDGLVFHDDRGLPLTGCVERRRWYRA LDRVGLGHEYVPHSARHTTATILNRLGLDDVTRTAIMGHSRVSTTNEIYTHVELDRLVAA TDGVERAIEG >gi|197324945|gb|DS990229.1| GENE 663 732270 - 732437 181 55 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282773|ref|ZP_03646095.1| ## NR: gi|224282773|ref|ZP_03646095.1| hypothetical protein BbifN4_02994 [Bifidobacterium bifidum NCIMB 41171] # 1 55 1 55 55 86 100.0 5e-16 MTATQVARILGVSTETLRKWRARRMCLPYVRVGRHIRYKAADVAAFVERGTVMPA >gi|197324945|gb|DS990229.1| GENE 664 732569 - 732943 432 124 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282774|ref|ZP_03646096.1| ## NR: gi|224282774|ref|ZP_03646096.1| hypothetical protein BbifN4_02999 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 124 1 124 124 253 100.0 4e-66 MPYIDIHNERVWIPERPLRSMDEARPMRDGDLWRCPACGRELDEEENDDGTITLVCPAHQ VGWDAGHEDEPYPMGGLVFRPTMGGGVFIAGPCMAVCLDRTSAVNAFFALGETYGLTRIE DVRP >gi|197324945|gb|DS990229.1| GENE 665 733042 - 734274 819 410 aa, chain + ## HITS:1 COG:slr2062 KEGG:ns NR:ns ## COG: slr2062 COG0675 # Protein_GI_number: 16330462 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Synechocystis # 6 407 4 392 400 231 37.0 2e-60 METIRRYNYRAYPTRGQREALSRLFGACRYAWNWYLDQRKVAWWLHLPIPSYAELSRRFT EFKREPENKWLWMVSSGPMAQALRHAETAYSRAYAHKAGYPRYKSRHCGEQAATFTTSAR FHVRHDHNARWMFLDLPKIDGEIKLRWSRDLPSRPSSVTLMRHADGTYEASFVVKAEPKP APKPRHDACGIDMGLESLASIVYSDGTREKVAPLRALRKAERRLRKLDKELSRRKRGSNN YSKTRQAKARLYARIGAQRRDLAYKLASKVAGENQAVTMETLCVKGLMRTRMGKSVADAA WSTFTDRVDTLCAQWGRKAIHIDQWCPSSQVCSQCGHRDGKKPLDVREWECPNCGAFLDR DYNAALNILDAAGLAESLNARGGDVRRRLASAGRDAIAREAGTHRTARLH >gi|197324945|gb|DS990229.1| GENE 666 734351 - 735433 1534 360 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_1040 NR:ns ## KEGG: BLLJ_1040 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 1 320 1 304 403 445 67.0 1e-123 MGNSQLSAAKKAKNDEFYTRMTDIEHELVHYRKHFKGKVVLCNCDDPFESNFFKFFALNF NPLGLKRLIATCYSGSPIAGGEYQPSLFDDDVDENTGRHRRAYKAVVNVFRDTTGDGGLD MDDIRNLLDSGENELTELHGDGIYGAGDFRSKECLELLDEADIVVTNPPFSLFREYVATL MDYDKKFVIVGNQNAITYKEAFPLLRDDRLWLGYNKVKEFVVPSADHPERGNIVTDGKGG LIAKFGNICWYTNLDIKKRHEDLLLYRRYKEDPSKYLHYDNYDAIEVSKVKDIPEDYWGV MGVPITFMDSYNPEQFEIIGCSESEGRGFSNGLWNPESGIAQPTIGGRKVYKRLFIRRRA >gi|197324945|gb|DS990229.1| GENE 667 735568 - 735879 339 103 aa, chain - ## HITS:1 COG:no KEGG:RER_00400 NR:ns ## KEGG: RER_00400 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 99 307 405 413 104 41.0 1e-21 MVEVADFGLAKERGSDLTSTGSSMKGTIRDPALGSFRDFKPVNDIYSIGFILNYILTGKE NLVTDGSRLGSIIQKCSATNPADRYQTVKGIIEDMRKTECPVG >gi|197324945|gb|DS990229.1| GENE 668 736078 - 736230 129 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282778|ref|ZP_03646100.1| ## NR: gi|224282778|ref|ZP_03646100.1| hypothetical protein BbifN4_03019 [Bifidobacterium bifidum NCIMB 41171] # 1 50 1 50 50 68 100.0 1e-10 MVKAVVADTTTDGKRTTLSPSLKMMAAERETTIAAIIHEWIQERLEKEGE >gi|197324945|gb|DS990229.1| GENE 669 736231 - 739143 3387 970 aa, chain + ## HITS:1 COG:SA0189 KEGG:ns NR:ns ## COG: SA0189 COG0610 # Protein_GI_number: 15925899 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Staphylococcus aureus N315 # 1 965 1 927 929 691 41.0 0 MAHVSEYDVENLFIDRLESIGYQFIEMANYDDVLANFREQLTKFNARKLVEAKGAAALSD AEFGRVMIHMDDKSVYESAKILRDKYVLALDNGKTVYLDFFSSDTDRNIYQVTHQVTMDK AHKDDVAYTNRYDVTILINGLPVVQVELKRPGVEINEAINQINRYRKFSFKGLFRYLQLF VVSNSVQTKYFCNENEMDGGSYNPILKSLVFFWTDDKNKRINKLDEFTADFLRRSTITEM LDKYMVIKTTEPVLMVMRPYQIYAVKAAKRRVLESNQNGYVFACTGSGKTLTSFKLAQLL RDEPRVDKVIFLIDRKDLDDQTVDEYNSFEKGCVDGSDSTAVLVKQLGQADRGLIVTTIQ KMANAVKGKRYERLMDSYRDKKVVFIIDECHRSQFGKMHGDIERHFRNANYIGFTGTPIF EANKGKDGRTTADVFYSGSKLDSCLHRYMIKDAIADGNVLRFSVEYQRTIFAKQMSASGI DPERLGDPEYCRRHNLDLDALYHDDERIRVVASDIFEHHKQHVHPQGKDVYTALFAVDSI QTLGKYYDAFRELNEARPDDERYRVAAIFTYQANEDMDEGGDEHSQELLARCMADYNGMF GTAFDLDSFDAYRKDIAKRMKQKELPQVDILLVVNMMLTGFDAKPLNTLYLDKNLIWHTL VQAYSRTNRVDKVTKQFGQIVSYRDIKKAQDDALRLFSGDGDPNEYLLESYEYYVNQWMN QEVQLRKAAPTVDDAGRLQSEEDIRKFVVAFRAMSGTLATLKTFGKFDWADLSVVLDDEE YEGYKSWYLYYHDEARKKDPKVPVPVDVDFDVELVRTDRINVMYILSLLKSAHEGGKSEE ERARDIDLVMREIERSDNDALRAKKDIMEAFIRTRFYDLPDGIDVQQAYEQFERESLQAE IESFAYDNGIEAQDILDVFSEYTFGGSISEEGIRKRLASYRMGLLKITRMTNAIKEFVVS AYSRYKAEGE >gi|197324945|gb|DS990229.1| GENE 670 739150 - 740724 2008 524 aa, chain + ## HITS:1 COG:SA1626 KEGG:ns NR:ns ## COG: SA1626 COG0286 # Protein_GI_number: 15927382 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Staphylococcus aureus N315 # 4 522 4 512 518 487 48.0 1e-137 MIDSAKYQAQAGELSQKLWAIANDLRGNMDSTKFRNYILGTIFYRYLSERTKDYMQEILK EDGLTYEQAFADDDYRPVVEQWSIEHLGYIIRPENLFGELVRKIVRPDGDADRFNVEDYE RAVNELIGSTMGQASEAAFSGLFNDMKLQDPDLGDTVAARTSLIAKVIVKISEIDFKLAD SQFDVLGTAYMILIGLFASDAGKKSGEFFTPTGPSKLVATLATVGLDEARTVGDCTCGSA SMLLEVQKHLTTGRVGHFYGQENNATTYNLARMNMLMHGVDYQHFDIYKGDTLREDKYGD VKMTVQVCNPPYSLKYDGNPALLDDPRYSGAGKLPPKSHADYAFIEHMVYHMDDNDGRVA VLLPHGVLFRGGAEEVIRKYIVKDLNRLDAVIGLAPNLFHGTSIPVCLLVLKSKRNGNSG NVLFIDASKEFKPGKNQNTLEDAHIQKIVEAYKNRADVDKFAHVADMAEIEANGWNLNIP RYVDTFEEEEPVDLAAVRDDLKRIESEKKAAIDKVESMLHQLRL >gi|197324945|gb|DS990229.1| GENE 671 740775 - 741596 410 273 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313139940|ref|ZP_07802133.1| ## NR: gi|313139940|ref|ZP_07802133.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 273 13 285 285 521 99.0 1e-146 MISLFVTIAIAFLQLRQSGRMGKFERRQDERDERRHAEEVKSQAVSFISKHYADRGLIPL CAMAAMYNDLYYYSREMYREFCCMTLEAQNRVLEYSGLDLRVTEEKGLFERCIKAVEEVL RAHFHDDESPFYDGGKYVLRSLERYGDEKIPVERINYRPPYMTGPLAVNFDGTSSYESCI ADVLSESFRGDGSEHPISDLERKYGFKVTPENEACQFATVLAQFIAIYGSEDDGSDKEYG TPGGYAGETIDTMEDLFLLAVFEMYIHLVLKEV >gi|197324945|gb|DS990229.1| GENE 672 741599 - 742792 510 397 aa, chain + ## HITS:1 COG:HI0216 KEGG:ns NR:ns ## COG: HI0216 COG0732 # Protein_GI_number: 16272178 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Haemophilus influenzae # 20 174 196 355 385 176 53.0 1e-43 MGEPKLRFKADDGSDFPDWDEMTLGDVGSVAMCKRVFKEQTCEVGDVPFFKIGTFGGAPD SYISQSLFDELKSKYAYPKVGTILLSASGTIGRQVEYKGEDAYYQDSNIVWLEHDDTVLD SYLKQFYTVVKWQGLEGSTIKRLYNKTILDTPFYRPSLPEQRKIADFLSAVDAVIAAQQA EVDAWEQRKKGVMQKLFSQEVRFKADDGSDFPKWEEKTLGEYCTQLKASIDPRKSPNTIF AEYSMPAFDESRKARFVSGREMNSARKILSEPCVLVNKLNVRKRRIWLVKNPEQNAVCSS EFVPLSSNAINLTFLSYFALTDRFTSYLMDCSSGSSNSQKRVVPDVILNYVMQIPSLPEQ RKIADCLASMDEAIQKSKDELAKWQELKKGLLQQMFV >gi|197324945|gb|DS990229.1| GENE 673 742974 - 743177 154 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIPGRKSPSSPTHRMGSKPRHNALLASWVTGICGGTGSPQLLLLRNASPPSSHLFELRNY GTPSRKT >gi|197324945|gb|DS990229.1| GENE 674 743083 - 743586 287 167 aa, chain + ## HITS:1 COG:no KEGG:Corgl_0421 NR:ns ## KEGG: Corgl_0421 # Name: not_defined # Def: CRISPR-associated protein, Cse1 family # Organism: C.glomerans # Pathway: not_defined # 1 157 333 491 574 111 39.0 1e-23 MPVTHDASKALWRGLEPILCVGDDGDFRPGIIRWLEEIRTEVLDSEEHVLNMVAIHAQGM TYGTQSSVFETGIDDKLSLNMVMFRHDYAGIAAVVDVVKSTDKAVAALTMFVRNLQSAAG DHSGKTQEMADQIRESAYADLDLLFRDRLANFDESQDPRDVLQCMVG >gi|197324945|gb|DS990229.1| GENE 675 744013 - 744201 62 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTEKTPPGTGIHKSVPCGQAAFLVRLYSADCHRLRGHRFIPVPIRPRPRETAGCILPFSR DA >gi|197324945|gb|DS990229.1| GENE 676 744210 - 744428 315 72 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_0547 NR:ns ## KEGG: BLLJ_0547 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 8 69 352 413 416 65 51.0 9e-10 MTDSKKTPYVPIENRPLLGVDEVEALTGVPAKIIRANVRNGLLKARMAGSTTMRIRRADL DAWLDALPAWHA >gi|197324945|gb|DS990229.1| GENE 677 744562 - 746010 2212 482 aa, chain - ## HITS:1 COG:Cgl2165 KEGG:ns NR:ns ## COG: Cgl2165 COG0174 # Protein_GI_number: 19553415 # Func_class: E Amino acid transport and metabolism # Function: Glutamine synthetase # Organism: Corynebacterium glutamicum # 10 480 5 475 477 624 64.0 1e-178 MAENKIFAHTPEEVEALINKEGIEYVSVRFTDLIGVQQHFTVPASEFIDNAFTDGMPFDG SSVQGFQAINESDMKLIPDVTTAFVDPFRKHKTLDVAFSIVDPLTDEPYSRDPRQVAGKA EAYLKSTGIADTASFAPEAEFFIFDKVRYENSMQRSFYEVDTIEAPWNSGVDTEEDGTPN IGFKNRIKKGYFPVPPCDHYQDLRDDMVANLQKVGLQLERSHHEVAGAGQQEINYRFNTL QHAGDDLMKYKYVVHETAALAGKAVTFMPKPIAGDNGTGMHCHQSLWKDGKPLFYDEQGY GGLSNIARWYIGGLIKHSSAVVAFTNPSLNSYHRLVPGFEAPVSLVYSARNRSAAIRIPL AGTSPASKRIEFRAPDPSCNPFLAFSAQMMAGLDGILNHIEPPEPVDKDLYELPPEEHAN IKQVPGSLDAALNALEEDHDFLTAGDVFTDDLIETWLDLKRGEIDQARLAPTPLEYELYF HI >gi|197324945|gb|DS990229.1| GENE 678 746326 - 747123 1277 265 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0689 NR:ns ## KEGG: BBPR_0689 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 265 1 265 265 491 99.0 1e-137 MAGKDEKTKQTKPKKQGTIKQIITIFKYTHKEDKMLPALIAGAFLVPVIVFVILGIIFRW TVLTWVFLMLIAIMLGMLLSTIVLTRRADMVGYKQLDGKTGAAISVLRNINKAGFNFPEQ PVWVNPRTKDAIWRGTGYNGIYLLGEGDYDRVKRAMDRQEQSIKSVTAGSQIPVYRVMVG NGQGQVPLKKLRSNIIRRKAYRPTHHKNALLAKIHPRERFILTKAELEKLNARLRTLQTK NGMGIPKGIDPTRMQHVSRRAMRGR >gi|197324945|gb|DS990229.1| GENE 679 747230 - 748720 571 496 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 5 494 4 457 458 224 31 9e-57 MSEAFDIAIIGGGPGGYSTALRAAELGKRVAMIERDATLGGTCLNRGCIPSKALISATHA IDSIRHAGELGISATINGIDYGTLHDYKKRIVDTMTQGLAGLLAHRGVTVFWGVASITGA ARPITVHIAAPADGRDVQRSVRSDVPEDIGPSYDITAQDVVLAMGSVPRQLPGEPFRGAI IDSTRAMSMAMPHNAVIIGAGAIAAEFASMWNAAGCKVTMLIRKDRVLSGWDRRAGVTLT RELKRHGIDVIDRSTVTHIDTGVNMGALVHYTSAKDGGSTEHIAEGEFVLVAIGRDPLTS DGWIRDAGVTVDDHGFITTDGYGRTPVAGIWAVGDITEGHALAHRAFEQGIIAAESIAGL DPKPLDEDTIPQIVFSNPEAASVGLTATDAKQRDDLSDIKETVYPMMSNARMMMSDSGGS LSLVSGIRAQQPGVRVVLGVHMVAPVASDIIAEAEQLVGNHTPLSDAARLIHPHPTFSET LGETLLKADDRPLHTR >gi|197324945|gb|DS990229.1| GENE 680 748973 - 749575 892 200 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0722 NR:ns ## KEGG: BBIF_0722 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 200 1 200 200 345 99.0 8e-94 MTWNPFKKDKAQEPVEEESPAKTVGKGRPTPKMKQAQARNLRPLVPPDRKASAKAAKERI RKREDEEYEAMRTGDINRMPKAERLPWRVYIRDYVDARRNLGEFFIPVAFVMLLGSILVT TIAPQLSVPMMILLYVYLIAVIIDVAVMWRKLKKKLIEKYGEASVAKGSRSASYAWSRAI QVRRWRLPKPRSPKRGNWPK >gi|197324945|gb|DS990229.1| GENE 681 749718 - 751085 1934 455 aa, chain + ## HITS:1 COG:MT2598 KEGG:ns NR:ns ## COG: MT2598 COG0624 # Protein_GI_number: 15842054 # Func_class: E Amino acid transport and metabolism # Function: Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases # Organism: Mycobacterium tuberculosis CDC1551 # 8 436 23 443 470 300 44.0 3e-81 MTAVFSDELRARVEADFGRVVDLLGRKVALKSISAEGITAEHMKRSAEFVADELRQVGID AKVVQSRNPDGTPGAWEVIGSKIVDPQAPTVLLYAHHDVQPVPDPSAWDTDPFVATEVGT RLYGRGSADDGGGIAIHSGAMKALGDDLKVNIKVFVEGEEEMGSPSFIPFIEDHRDEFAS DVIVVADSGNWSAEIPSLTTSLRGNTCVDVNVKVLHHPVHSGQYGGPILDANTLAAMLIA SMYDANGDLAVPGVAAQEPVGGLQRDLDEATVREDAGIVDSYRLAGTGSLASRLWTKPSV TVIGFDAHPVEGSFNVVSPETTFRLSLRTAPSQHPQEAQDALAAFLQAHAPFGAEVKVTK LENGMGWAMDPNAVATKDALAAMEEAFGVAPINKGEGGSIPFIPELQRIFPSAQVLVTGP EDPKANAHSPNESISLPGLKNNILAEALLLAKLGE >gi|197324945|gb|DS990229.1| GENE 682 751252 - 751410 79 52 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNTYSEPDHLTGYCADARVAIVDNDECALESVVSLFADHLPQTMLSGRRLRG >gi|197324945|gb|DS990229.1| GENE 683 751601 - 752701 877 366 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0724 NR:ns ## KEGG: BBIF_0724 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 366 1 366 366 579 99.0 1e-164 MKKRRNRGKNGKTVGNGSISKTRNSGRISVIWLLLAVVVAVSLTVGACALWLPDRAPALL GSAKEITSAPAGVQEYTGATQVTMIPTVSQTRELVGNASGTVTEDMSSQGLTSGKTAMKV NGVSVVALATATPMYRDLATGDKGDDVLALNNELARLGLPASAKSTTYTWNTSQGVKQLM SAAGDTSDGSLPLTDVLWIPAASVRVNEWAGTVGATVAGGSVVGKVPGSVTKFSIQNGQP SELDRTVTLIGQTATLKAGTTEVDDAEFCAKVAATQEFQSLTSDMLATGLEASVQLVNPV QALRVPAASVIGVNGSKGCIVSGGRTIKVSIVGSELGASLVEPQGADAAAITSVEIGSGL TGESCR >gi|197324945|gb|DS990229.1| GENE 684 752701 - 753519 723 272 aa, chain + ## HITS:1 COG:AF1469 KEGG:ns NR:ns ## COG: AF1469 COG1136 # Protein_GI_number: 11499064 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Archaeoglobus fulgidus # 48 217 33 218 226 126 38.0 5e-29 MTGEDVYAGAGVGAAPQPERSVSVHDLAHRFPGTDVLFEHLDFTAIPGQTVAICGPSGCG KSTLLSILAGWEKPYHGTVERKNVERVGWVFQNPYGVPGRTALDHVVFPLLAKGLRRREA EPQALEAMGLFDLEYAADRRFSELSGGEAQRLMLARAVCSRPDMLLVDEPTAQLDTRTAH SVSHVLGNLAGQGMIVLVATHDPDTRDACGRVIDLADYAPGDNEDSGFAPAGGNEPAEPT DPAPAGGGSREADGGGPTDSTDIAENGSEVRS >gi|197324945|gb|DS990229.1| GENE 685 753516 - 754598 1113 360 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0695 NR:ns ## KEGG: BBPR_0695 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 360 1 360 360 660 98.0 0 MRLGSIISETLRNIASGTAHALTMFLAVLFAGTLLGGYEAMSVMGLETEAAVRIRAFADV KTVVGGNVDGLACDRLSDHGDPSFISGAMRSGPQVVPLATKGIELSSYEVTAGMMRLITA GDPQEVPDSSGVWVSSDVSHDFGLVKGSRMQTNHGTVTVAGVFDWPNDGRDMRFAYAMIA PAASSGGVFQECWAKQWPQSDQMDELLLSTATKNPKSEMRPGVTALNKGFDAHYDAQKGY LTRVTRWMPYLGLAVGLLLGGISVRRRRLEYAGALHSGESKGAQLLGIELESLIWAGVGT LATCALLSAYALRMSQSDPLAVLLAAVRTPLVLLAGVLVSSLLTGSVIRQTQLFRYFKNR >gi|197324945|gb|DS990229.1| GENE 686 754613 - 755899 1516 428 aa, chain - ## HITS:1 COG:L100350 KEGG:ns NR:ns ## COG: L100350 COG1472 # Protein_GI_number: 15672482 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase-related glycosidases # Organism: Lactococcus lactis # 60 428 35 403 403 227 38.0 4e-59 MQQIKHGGRRPRPSSAPTIIAAMLCVVALVAAGTAWWMLRPQQKDTLEHLAQPQSSSSTL NRDKAPTPKPQKSQEHQKAAGDSPAAKASRAIATMSLDERAGQLIMAPMFAGGNPADLSA LISTRHVGSVVLIGNWNNGTAAAKTAADALQSYAPSGNQLIVSTDQEGGQVQHLKGSGFD TMPSAVAQGQMSADTLRSSAKTWGGQLKQAGINVDLAPVLGTVQVKRSSNAPIGALNRDF GLDSNGNAQHGIAFVEGMRDAGVGATVKHYPGLGAVTGNTDFTTEGILDTTTTLDDEEIG AFNTTIKQAKPAMVMMSLATYQRIDSSAPAAFSSKIIDGTLRGSVGYDGVVISDSLSAAA VSGIATKDLGVRLVDAGGDLACIGDTSYVTPILDGIIARAQSDPAFAKKVTASATRVMTL KYQMGLAK >gi|197324945|gb|DS990229.1| GENE 687 756016 - 759264 4407 1082 aa, chain + ## HITS:1 COG:Cgl0762 KEGG:ns NR:ns ## COG: Cgl0762 COG1615 # Protein_GI_number: 19552012 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 81 970 4 881 967 585 37.0 1e-166 MSFFDMLGMFDPGDGPRGPCRDSGATDDDPVIVDVQADGDDHGETPSAGKGEPPKRGVPR LTPRPLPNGPSKGTKILIGVVLALVVVVGLFFGLSQFITDLMWYGQLGFQNVVWTQLGVK FGLWAAYALLMALVSYVSAWLAIRARPDSSDGSTFRIKDDVIEVGKSFSSKTARRAAVVV SLVVGVMFGSQFNSNWSEILLMFNAQSFGTADPQFGIDNGFYVFVLPGLRLVMSAVSMLL LMGIVFSVVTHAMMGGIRFTMPVHGRGVLAVTKRARRQIGIWLILNMLAWSARQVIGVFT HLTQQGDRITGAAYTTVHATIPVTFIMAAITAMLGVFLGVWLMRSHALEGAAKPSVRAAA ALKAWRTPVIAIAAALVVSLVLTVAWPMLLQRFKVNPNAQEMESTYIQRNINATQQAYGL DKVKVEQYKATTKGKSGALSSEAESTAQIRLLDPQVVSPTFKQLQQSKQYYTFADTLAVD KYDIDGVSQDTVIAARELDLEGNDNRNWVNDHTVYTHGYGVVAAYGNKVAADGQPQFFES SIPTQGKLTESQKYEPRIYFSPNAPEYSIVGAPKGMDSWEFDYPTGSQGATNTFDGDGGP SVGNIFSRLLYAVRFGSDQILFSDRVTSDSQILYDRSPKERVAKVAPYLTLDGRVYPAVV DGRVKWIVDGYTTSDAYPYSQMTDLGSVTQDSTTKTSNTIQALGSQKANYIRNSVKATVD AYDGSVELYAWDANDPVLKAWEKIFPGQYHPISEISGDLMSHLRYPENLFKVQRELLAKY HVSSAGQFFSGEDFWQTPVDPTESATAQQQGVPQPPYYLSLQTGGSKKPVFSLTSSYIPA GTSTREILTGFLSVDSDAGNEKGVIGPNYGTIRLQELPKDSNVPGPGQAQNNFNANADVS KELNLLESGSTKVNRGNLLTLPLGGGLVYVQPVYVQSSGSTSFPLLKKVLVAFGDQVGFA DTLDEALDQVFGGNSGASAGDAENSGNTSQSGDGQNGTDSGDGSESNGNANGSGTNEGKD QNGSSSQGGSQSPELQQALKDAAQAMKDSQSAMKNGDWTAYGEAQKQLEEALNKAIELDG GK >gi|197324945|gb|DS990229.1| GENE 688 759319 - 759501 88 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVWPSAVPHHAILGCFSPSVAHGLGANQMVRWVEHGWGPFWAENHPSHAVHDSPRQRGKK >gi|197324945|gb|DS990229.1| GENE 689 759772 - 760893 1544 373 aa, chain - ## HITS:1 COG:lin1068_2 KEGG:ns NR:ns ## COG: lin1068_2 COG1887 # Protein_GI_number: 16800137 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Listeria innocua # 15 364 21 374 387 130 27.0 4e-30 MKRLLINAVRMMMLLMYRFFRAFPRKRRIVCLSRESDRPTTDFRLIRHYVRQTHPDYSVV ILAKKLHNPVRYGFHMIRQLYFIATSQAVLLDTYAIVVSLLAGYIDVPVIQMWHALGNMK RFGYTALGSKEGRKFSTASLLNMHRGYTSVLISSKSFISDYARGFDIDPSIIYEAPLPRT DLLINSSYRAQQRERIIREFPELGRKLNIVYCPTFRKKTPANQTQAAAALADAIDYDKYN LIVKCHPLDDLRINNPHVFQHYPSQYDMLFVADYVISDYSTVIYEAGLLDLPVFLYAYDW PDYSKKRSLYIDPKRDIPTLFTDDAEAIVRAIEHDDFDHAAYQAFIRRNVAIPEHGSCTA RVVEHVFDLIAAR >gi|197324945|gb|DS990229.1| GENE 690 761026 - 762912 2072 628 aa, chain + ## HITS:1 COG:SA0247 KEGG:ns NR:ns ## COG: SA0247 COG1887 # Protein_GI_number: 15925960 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC # Organism: Staphylococcus aureus N315 # 197 569 180 556 562 221 31.0 3e-57 MSLDVHQIRWRSSYLEIDYSSRDGGVPWLYCVGRCQFVPFEIVGLESGVRRARLNLVLGD GREVLPGGQWIICEKIKESALVSLQALYAEYPLMPQRVDYDVRHLLPPELRDDDEAVAQY TDEERLELVARHPYVTSGVTYDDEVLERLDNLDRVFRYGKNSYAYTGVFVPKTNRAGLIY LALHMQFFQRNKTPRHRQRSRRQMQKDVFAATYSVMTKLVPRKRNRILFLKENGEGPTEN MEALQSRMIERGMDKRFDIRARYRNVFAGRQNIVAWLRDLFEIARSRYVFIDDYTPVFNF IDPGEDVTLTQIWHAGVGFKSVGYARFGLKGSPDPYNSAHRRYTYALVGNEHLRRIYSEV FGIEEEALLATGMPRLDHFLDEKVEKEYREEMADKFPWSAKGRVIVFAPTFRGTGQRTAY YPYDEIDMDRLYRMCVETDTYFVFEMHHFIRKRPDISAEYADRIFDLSDESLTKLFFIAD VLVTDYSSCFYDYLLLKKPVVFFVPDKTAYSLIRGVQRSIDEMAPGVVCDTFDEFLDVLR TRHYETVSPHPSSIDRAAERSGLASDRAIDTIIYGKDVPGVRKQASGKGGAVPVRQSDKS AKSERKAKELLDSKVADKDTKSASDEEE >gi|197324945|gb|DS990229.1| GENE 691 762933 - 764102 1307 389 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0731 NR:ns ## KEGG: BBIF_0731 # Name: not_defined # Def: hypothetical protein with acyltransferase family domain # Organism: B.bifidum # Pathway: not_defined # 1 389 1 389 389 743 99.0 0 MAVAPAAGAGEPGSGSGETARHAAPRGAGRPSYELLSKYRGVLMGVQILLIMAFHYTEDL SNAADHFNGPAQVFYDYIGSSGVDMFLMISGLGLYYSWKRNPDAGAFYRKRLTRVLVPYV AVALVGWIWFDFVHSDAGVVRFLADIAFVTFFTDGVKWFWYIAVCLICYVLFPLVFAVVD GTRNVAAAWVRTLALCAAAVLVAVALYRFAPSFYDNVDLIVNRIPCFIFGALLGRLSHER RPLPMPVVAACLTAVAVMLYPMQLVDVPLVKVYLRAALNLLLCICGVVIMDVMARAGKPA LAGLHDVVSKVLSWFGRYSLELYLLHVMIRKMLNLNDLPTTHPRYEAVVIIGAIALSIPL KRLCNLIQHRLLRGKRLLNAKEYRGTYAA >gi|197324945|gb|DS990229.1| GENE 692 764092 - 764343 250 83 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0701 NR:ns ## KEGG: BBPR_0701 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 83 1 83 181 165 90.0 5e-40 MRLDAPAGEKMAVFVSHAFVLYLNPLPVPHIDGPFLFGPNRFFHDYLEGRNIAFEDQELQ VDFSSMNEMGITFMEEWNKMYTG >gi|197324945|gb|DS990229.1| GENE 693 764423 - 764638 140 71 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0701 NR:ns ## KEGG: BBPR_0701 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 71 111 181 181 136 100.0 3e-31 MVLGCEIGAERILEHPDIERLKTENKKLSEKRKKLEADLKKSRAEVQKLRNSKSWKVTAP LRAVMRLFGKD >gi|197324945|gb|DS990229.1| GENE 694 764780 - 765496 293 238 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 4 234 6 230 234 117 32 2e-24 MNIAVIFAGGTGQRMNSRTKPKQFLLVHGKPIIIYTLEAFDQHPDIDAIVVVCLKEYIDV LEQLITKFGVGKIAAIVPGGSSGQESIRNGVDKANRLYPADSVVIVHDGVRPLIDQQTIT DCIVSVKKNGSAVTVVPATETIVQSEDGVVTNIIDRKQCQLARAPQCFRLGELHDAHHKA VEEGLGDFIDSASLMLYYGHKLYEVEGASSNIKITTPSDFYIMRAIMDAEESSQIFGL >gi|197324945|gb|DS990229.1| GENE 695 765523 - 766566 1212 347 aa, chain + ## HITS:1 COG:SMb20239 KEGG:ns NR:ns ## COG: SMb20239 COG0451 # Protein_GI_number: 16263977 # Func_class: M Cell wall/membrane/envelope biogenesis; G Carbohydrate transport and metabolism # Function: Nucleoside-diphosphate-sugar epimerases # Organism: Sinorhizobium meliloti # 21 345 7 316 346 134 31.0 3e-31 MFDLQEEYASLAQHLDIDWDALAGRHVLVTGATGLIGSLCARTLLERNRLTGAGIIVDAL VRDPAKAQAMLGQYTADDGLVLHQGSLEDVDSLDLPADYVIHTACPTASSFFMSHPVETF SAIVDGTRSMLELARRRGAASFVYVSSMEIYGMGNKQRGTEHLLDESAVGYIDPCSVRSC YSEGKRAAENLCVSYHSEYQVPVKAVRLAQTFGPGIPRDDVRLFAALARNAVAGKDFVMK TTGESTRMYSYTADAVSAILTVLVAGENGVSYNVANPSTYSSIREMADMVYREFGTGDAR VIIDVDPNAPYPPEHHLPLDVSRLEALGWRPQVGLEDMYRKLIAYMG >gi|197324945|gb|DS990229.1| GENE 696 766620 - 767426 1092 268 aa, chain + ## HITS:1 COG:SA0594 KEGG:ns NR:ns ## COG: SA0594 COG1682 # Protein_GI_number: 15926315 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Staphylococcus aureus N315 # 36 268 42 277 277 94 26.0 2e-19 MFATLKQVVGENWHWRRQVWNLAKIDLVKTYRGAALGKIWLFAKPAVYILVFWVALKFGL RSSSDVNGKPFLLWLAAGVFPWFFMSDMITTGSDVYRRYPYLVNRIKFPLSLISTFYTLS LLIIFACMMAFTIVVALLTGVHLGRYMLQLPLVMVFMFLFWVAWSMALSPLSAISRDFSN LLKTLGTPFFWLSGILFDISGWPRTARLVASFNPVTWVVQSVRDCFIYNKWFFTDWESFL PFLFVLLIFVVLALHNYHRLYMEVPDVL >gi|197324945|gb|DS990229.1| GENE 697 767449 - 768207 183 252 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149915877|ref|ZP_01904401.1| 50S ribosomal protein L17 [Roseobacter sp. AzwK-3b] # 54 240 296 502 563 75 26 9e-12 MGDATVIRDEDASNPVAVRFDHVTKQYKLFKNDKLRLLSTFSKRIPHDTVNASDDLSFTV NRGESLALLGDNGAGKSTALKMITGVCFPTSGTVEVHGRVSALLELSAGFDMKLSGMENI DMRCQLWGLSKEESKELIPEIVEFSELGKYIDQPMRTYSSGMRARLGFAFVSSIRPDILV VDEALSVGDRKFAKKCRERVNSIIANENVTVLFVTHSTGTAKEFCHRGIVIQKGKAMFSG GIEEAVDFYTAS >gi|197324945|gb|DS990229.1| GENE 698 768561 - 769115 593 184 aa, chain + ## HITS:1 COG:DR1182 KEGG:ns NR:ns ## COG: DR1182 COG1247 # Protein_GI_number: 15806201 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase and related acyltransferases # Organism: Deinococcus radiodurans # 9 144 10 144 174 102 42.0 4e-22 MLEDMSYTIRAAVDADVPAIADIYNEAVIRGGASADLEPVSLESRRAWVDSHQPRAKYPV VVIKGPEGAVVGFGSLSKFHQRAGYDGIAELSYYIAGDHQRQGLGTMMVRWLIDAAAERG FTHVTAIIYADNAGSVALMRRFGFIRFGLLPAAVGALDGKLHDMSYWVKALAGGVQSLRL KTGE >gi|197324945|gb|DS990229.1| GENE 699 769119 - 769718 917 199 aa, chain + ## HITS:1 COG:CAC3217 KEGG:ns NR:ns ## COG: CAC3217 COG0193 # Protein_GI_number: 15896464 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Peptidyl-tRNA hydrolase # Organism: Clostridium acetobutylicum # 6 198 2 184 187 157 44.0 2e-38 MASDFWLIVGLGNPGKKYEGTRHNMGFMTADILAERWSVAFSDHKGLAMLGKGAMNLQGR NVKFFLAKPLTYMNDSGNAVASISAYYQIQPDHVVVIHDDMDLEFGRIKVKAGGSAGGHN GIKSIDKALSTPKYARVRMGVGHAQRGAHAHDNTVNWVLGGFGPDQRKQLPEFLADGADA AETIIFDGLAATQEKFNGR >gi|197324945|gb|DS990229.1| GENE 700 769708 - 773307 4370 1199 aa, chain + ## HITS:1 COG:MT1048 KEGG:ns NR:ns ## COG: MT1048 COG1197 # Protein_GI_number: 15840448 # Func_class: L Replication, recombination and repair; K Transcription # Function: Transcription-repair coupling factor (superfamily II helicase) # Organism: Mycobacterium tuberculosis CDC1551 # 23 1195 7 1207 1234 1078 50.0 0 MAAEQGRARGKASAATATRVQNALIDGSLCGILERLDEDPAFHRLVSGGMSIADGKDIAP IITVGTPDGLRPAIAAAQAEHTPVVLVVASSREAEDTVNALRSWYGGDPNDIAQLEAWET LPHERLSPRADTVASRMAVFRRLTHPSDTNPMFGPIRILVMPVRSLIQPVVKGLGDVDPL VFTQGEELPLDDVSRRLVENAYTRVDLVMDRGEFAVRGGIIDVFPPTAPHPVRIEFFGDE IDSIREFHASDQRTYGEGVRTIWATPCRELQLTDAVRDRAKRLIGQIPNADDMLESIANA IPIEGMESLMPALIDDMEPVTGMLDRHAVIMLADPEKLCRAADDLSKTANEFLAASWHVA AAGHGAGAPISFDQASFLDYEETINSLAYSSHDVWNLTSFGVDASRPNHVQLAAGNPGEY RGDEAKAAAGIEGLIDAGYQVTVTAAAQGTLARLKRAVNETGIASFDVIRSQAIDGFIDT AAKTALLTERDLTGRSSAAGQAKTPKRRRKAIDLMELKAGDYVVHEQHGIGRFLEMRQRT IGTGANKTTREYLVIEYAPSKRGAPADKLFIPTDQLDLISKYIGAEAPKLNKLGGSDWAA TKAKARKHVHEIAEDLVKLYSARQRTKGFAFSPDTPWQKELEDAFPYQETTDQLTTIDDV KSDMEKPVPMDRLICGDVGFGKTEIAVRAAFKAIQDGKQVAVLVPTTLLVQQHHETFTER YEGFPVTVAAMSRFQTTKEINETIEGLETGGVDVVIGTHKLLNPKIKFKDLGLVIIDEEQ RFGVEHKETLKALRTNVDVLSLSATPIPRTLEMAVTGIREMSTLATPPEDRLPVLTYVGA YEDAQVTAAVRRELLRGGQVFYVHNRVQDIAKTAAKIHELVPEARVGIAHGKMGEKQLDG VIRDFWHRDIDVLVCTTIIETGLDISNANTLIVDHADRFGLSQLHQLRGRVGRGRERAYA YFLYDPSKPMTQQSHDRLATIAQNTALGSGFDVAMKDLELRGTGNLLGDEQSGHIEGVGF DLYVRMVSEAVEQYKEPERTEPVAVTIDLPIEASIPVDYIDSDKLRLEAYRKLAASRTDE DLKELADELTDRYGKLPEEFETLFGVARLRMKARELGISELVAQGKNVRVGKIDPPESMQ MRINRIYRGAQYRPVTHTYLIPAPFAGTLGGKPMPGDQVMDWVSDLLHDFAWKPQPRKA >gi|197324945|gb|DS990229.1| GENE 701 773307 - 774821 1062 504 aa, chain + ## HITS:1 COG:FN1730 KEGG:ns NR:ns ## COG: FN1730 COG0147 # Protein_GI_number: 19705051 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Fusobacterium nucleatum # 50 485 47 452 453 251 33.0 2e-66 MGSGSPFEGMPGGIGERNGMIRLPYHPLTSLIRHFDNGQALTLLHSGRGGRYSVLGLHAY HRLMQYGDDVMEGTLAVCGDDDVWRDRLLPGQDALMLLHDRLRDEPGVLGFMSYDDGRRR EGARSRFDGGQQAAERKTPPDAAWWSFDDILIEDRQRRSLTLLSHHRHPNSARNIAAIRS VCQSVPAGGGCREATGGGYPDSPHTSASHRGAWRCDHDRASYCEAVERLKSHMHDGEAYV VNYSLRLDVTSPVTPLDMFLRLNDDNPAPFSAYVNGGGWQIVSSSPERFLECRSGHVVTR PIKGTRPRGLTVQADAANRAALEQSGKDHDELLMVTDLERNDLSRAATPGTVQVTGFAEL ETHPHVFHLVSTVEAELPDARDLPELLAVMSPGGSITGAPKRRVMQLIDRYERSPRGVYT GSLGYITADGDCDLSILIRCATHVGRCDKAGLYRIGAGGGITIESDPDSEYDEAMQKAQA LLDALDCDVSDSDVHDGRQGQWHD >gi|197324945|gb|DS990229.1| GENE 702 774814 - 775602 627 262 aa, chain + ## HITS:1 COG:FN1729 KEGG:ns NR:ns ## COG: FN1729 COG0115 # Protein_GI_number: 19705050 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Fusobacterium nucleatum # 19 256 5 239 249 155 35.0 1e-37 MTNSNGTPGGEGTAVTFALDEGYQFGLGVFETINLTGGRLVMLDRHLDRLRRGARALDID APDDDTLRAHIAEHLDAAELPDGRSFAVKLMVSSANVIVTHRPNPYADWAQDRGLRLGWC RAWRNECSPLTAHKTLNQGDNILESRSARRLGFDSAVYLNTRGDICETTNANLFFVRDGR LYTPDERCGLLPGTVRAWLCERYEAEQGTFRQDSLDSWDEVFATNALMGVRPVVELGDAG YGIGPVTRAIQREYRRLELGIL >gi|197324945|gb|DS990229.1| GENE 703 775800 - 777098 2053 432 aa, chain + ## HITS:1 COG:BS_eno KEGG:ns NR:ns ## COG: BS_eno COG0148 # Protein_GI_number: 16080443 # Func_class: G Carbohydrate transport and metabolism # Function: Enolase # Organism: Bacillus subtilis # 1 423 1 425 430 494 59.0 1e-139 MAAIESVYARQILDSRGNPTVEVILDTEDGAEGRGLVPSGASTGEAEAWERRDGDKSVYG GKGVLNAVKAVNEVIAPKVIGMDATDQRALDDLMIELDGTPNKGKLGANAILGVSLAALY ASAESAELPLYRYIGGTNGHILPVPNMNIMNGGAHADFATDIQEYMISPYGFDTYSEALR AGVEVYHTLKNVLKKEGLNTGLGDEGGFAPKMKSNEDSLKYIMDAISAAGYEPGKQIGIC LDVASSEFYNKETGKYRFDGEERDSAYMLDYYENLINEYPIVSIEDPFNEEGWEDWAEIT RRLGDRLQFVGDDLLVTNPARLRKAIDMGAANSLLVKLNQIGSVTETLDAIELATENGYT SMVSHRSGETPDTTISDLAVAKNTRQIKTGAPARGERVAKYNRLLEIEEELGSTAQYAGY SAFKACKKYIAK >gi|197324945|gb|DS990229.1| GENE 704 777141 - 777722 589 193 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0743 NR:ns ## KEGG: BBIF_0743 # Name: not_defined # Def: conserved hypothetical membrane spanning protein with septum formation initiator domain # Organism: B.bifidum # Pathway: not_defined # 1 193 3 195 195 360 100.0 1e-98 MPGIFAKSNVPGIFVAMNDSTRNMRPRGKRSKRHGTGPIAFFVSLFIIALGAIQLVSTFH TYALNLAQLNDLKNQEAALVTKKQDLENDIERWNDDSYVATQARERLGFVFPGEKAVRVQ HPEAVTGTSEGTAKTKSGTSDGKVLPWYSELEYSFKKADERPSKTASGSQSGDTGKADGN SGSATDTNSGDKQ >gi|197324945|gb|DS990229.1| GENE 705 777809 - 778396 549 195 aa, chain + ## HITS:1 COG:MT1053 KEGG:ns NR:ns ## COG: MT1053 COG1507 # Protein_GI_number: 15840453 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 28 182 3 150 163 125 46.0 4e-29 MTEPESQDESTTRDVAKLADRFLQQRADERDIAIVERQLGRYPRGMVAVGARCACGRPLA VVTRPMLPGGIPFPTTCYLTSPEAVKAVSHIEAEGRMRAYNELLHDDETVAGEYRGAHRL YVAFRHELAVRLGDDESRIANVSAGGMPERVKCLHALLAQTLVMGEGVNPIGDRVLEAVT EEFSPSVCRCGSLDD >gi|197324945|gb|DS990229.1| GENE 706 778546 - 779544 927 332 aa, chain + ## HITS:1 COG:MT1054 KEGG:ns NR:ns ## COG: MT1054 COG0248 # Protein_GI_number: 15840454 # Func_class: F Nucleotide transport and metabolism; P Inorganic ion transport and metabolism # Function: Exopolyphosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 1 322 1 315 319 217 45.0 3e-56 MKSVTVAGIDCGTNSIRLKIARVDDQGMHEIVPRILRVIRLGQDVDKTHRFAQDALDRAY TAAAEFAGVLAQHPVDAIRFVATSATRDAVNRDTFEDGIEQILGVRPEVIPGTEEADLSF LGATSVVSRGELEPPYLVVDLGGGSTELVLGGDGIDAPSAQVQAAFSMDIGSVRMTERHL RHDPPSETEIAEAIADIDEHIDEAFRTVPAGRTRTVIGVSGTVTTMSALALGLKEYDHRR VDGVRIPVDDAYAVDDRFLRMTREQRRAYKTIHPGRIDVVGGGAVVWNRVLAKVAQAAAA DHGGVIDSYVASEHGLLDGIVLDCGRRLLAER >gi|197324945|gb|DS990229.1| GENE 707 779744 - 780313 575 189 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0746 NR:ns ## KEGG: BBIF_0746 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 189 1 189 189 289 99.0 3e-77 MANWTNVTREPETGLPTMLVQAVSIAFVMCVCELVSAPVMVSAAGGAFALMPWFLVACLF AVAFVYTVGFVLLWAADSFAARLKRRDALMPLIYAVIGCVGFGIWGYCVYPATMNSIITR AGLPTLSQGDSLMIGINCAVVGLAAFFLGTAAMPRVMKSKGRIAVTAAAVIALAVFGGVV LAMTWSHLA >gi|197324945|gb|DS990229.1| GENE 708 780482 - 781942 1456 486 aa, chain + ## HITS:1 COG:PA2443 KEGG:ns NR:ns ## COG: PA2443 COG1760 # Protein_GI_number: 15597639 # Func_class: E Amino acid transport and metabolism # Function: L-serine deaminase # Organism: Pseudomonas aeruginosa # 2 486 3 458 458 467 53.0 1e-131 MFSVLDMFTIGVGPSSSHTVGPMCAAQAFASSLEESGAVSRVGRIRVVLYGSLSLTGLGH GTDRAILAGLEGNVPATVDTDYLLSVRERCAHDGTIHVNGTNAIAYDDDGDMVFDRWKRL APHPNGMRFQAFDAQGNIIDEQVWYSIGGGFIRRGRIDDALISNHEQTPASSQSPEDSGN DETAEYGDGVPYPFVSCDGLIDLCRKHHLSIADVVWANETARRSPQEVRDRLTRIWNVMS HCIDAGCASATPTLPGGLDVPRRAPMMYRRLAANSDVLRRDRRISSALESSDSAWVALFA MSVSEENAGGGRVVTAPTNGSAGIIPAVLEYYWHFVESADDEGVRTFLLTAGAVGYLFKR NASISGAEVGCQGEVGVACSMAAAGLAAVMGGTPEQVENAAEIGIEHNLGLTCDPVGGLV QIPCIERNAMAANTAINAVRMAMLGDGSHIVSLDQAIATMKQTGEDMMSKYKETSKGGLA VNVVEC >gi|197324945|gb|DS990229.1| GENE 709 782103 - 782507 511 134 aa, chain + ## HITS:1 COG:alr0577 KEGG:ns NR:ns ## COG: alr0577 COG0545 # Protein_GI_number: 17228073 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerases 1 # Organism: Nostoc sp. PCC 7120 # 16 134 49 165 165 77 42.0 6e-15 MANMPEVNAVFGAAPEIAFPSDEAPKGLKAVEIVEGDGPMVRRGDTVTVNYHGVVWGKDT PFDSSFARHQPASFGIGVGQVIRGWDQTVPGHNVGSRLVVSIPPEYGYGSQGMPAAGIGG GDTLVFVIDIISTR >gi|197324945|gb|DS990229.1| GENE 710 782566 - 783045 819 159 aa, chain + ## HITS:1 COG:MT1111 KEGG:ns NR:ns ## COG: MT1111 COG0782 # Protein_GI_number: 15840516 # Func_class: K Transcription # Function: Transcription elongation factor # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 161 164 91 41.0 5e-19 MGEEKSVLLTQEAFDTLKDELAHRQGQYREEITKRIAAARAEGDLSENGGYQAAREEQAK NEGRINELTVKLRNATIVEAPKAGKVGNGSLVTLELAGREMTYALGSRDIKVATKYDVIS PESPIGAAILGANEGDTVSYKAPNGREISVVIKEAKPLS >gi|197324945|gb|DS990229.1| GENE 711 783342 - 783488 107 48 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTAATTITTVVTPIEIFVERLIRNNSSHKLCQKFALYGVLGTHIPYRA >gi|197324945|gb|DS990229.1| GENE 712 783927 - 784814 1023 295 aa, chain - ## HITS:1 COG:ECU06g1500 KEGG:ns NR:ns ## COG: ECU06g1500 COG1272 # Protein_GI_number: 19074401 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Encephalitozoon_cuniculi # 82 286 2 207 218 126 34.0 4e-29 MAVQDDATVAAKRAAVIKAREVALQAKADAVRAKSRAKAEAIRHKAEEKATRTLAKGEAH AARIEGIAPAEVERKIRLDVHGRPKPLMRGWIHAIATPLSLAAGIVLICLAHGAPLKWAC AVFMTCSLILFGNSAAYHLGDWSPRVTDVLRRIDHVNIFLLIAGTYTPVSFALAPHMRNA IIAGIWSCTLVALIIHVIWISAPRWLYTVVYIVFGVSGVAFMYFFWVSPAAGPAVVVLLA SGGACYILGAIVYALRKPDPWPRVFGFHEIFHCGTVAGYACHMVAIYMVIVHLWP >gi|197324945|gb|DS990229.1| GENE 713 784942 - 786438 1872 498 aa, chain + ## HITS:1 COG:ML0803 KEGG:ns NR:ns ## COG: ML0803 COG3920 # Protein_GI_number: 15827350 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 25 488 22 488 500 287 38.0 4e-77 MVLMADFTHILATRPDFTESDREWLHHLVADWQVIADLSFADLLLIVQDGDGNYRIVEQC RPSTVMTLRIDDAVGALVAPEMVGELDAAMQSKTVFRSTVLRAVGKSTVCNVYAPVRHDG KTLGLVVRETNMATRESNGRYESESINAGKQLYEMIPRGQFPYVNAIMSQRHVARVSDGF IMLTQEGIVRYASPNAISCFRRLGCLMTMQGHFLSEIGTDLLRRNDPVPEALPMVLMGKD AVDSEINANRSAVSVRSLPLYDNNGRTGAIILCRDVTELRRREVELQTKNATISEIHHRV KNNLQAVSALLRLQARKTKSSEVKKELEEAQRRVQTIAMVHEGLSQTADEIVDFDKVISN LLKMSVDLATMCDQHIHIDYVGKFGMMPAQDATPLSLVLTELITNCVEHGFEGRKEGHIT ISAGRSGNSLNVVVEDDGSGLANEEHDGLARSSGSGLGTQIINTFVTNDFGGSVRWEPRH EGGTRVILDMTLRAAQNE >gi|197324945|gb|DS990229.1| GENE 714 786573 - 786851 328 92 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0754 NR:ns ## KEGG: BBIF_0754 # Name: not_defined # Def: cell division transcription factor WhmD # Organism: B.bifidum # Pathway: not_defined # 1 92 1 92 92 165 100.0 5e-40 MSSAFDWRAKAACRDKDPELFFPVGNTGAAYQQIEEAKAVCRTCKVIDACLKCALDTNQD YGVWGGLSEDERRALKRRAMRARRSQAMQLQV >gi|197324945|gb|DS990229.1| GENE 715 786967 - 788784 1234 605 aa, chain - ## HITS:1 COG:CAC0408_2 KEGG:ns NR:ns ## COG: CAC0408_2 COG1674 # Protein_GI_number: 15893699 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Clostridium acetobutylicum # 92 339 401 657 1312 165 36.0 3e-40 MITLVAPIAAQALMVIMLLLERRWLFAAMVAPGMVGCMASAASSLADRRGSSRRDESGTT SHDAAGGRPSRPTDMAGARGRHHGSADGADRDKDEGESEDPSRIHSPSLEELTGLQAEPL PWRIIARTWLASPSLCVTVGMGSGQRPFTIDLPRQGPHALVAGTTGSGKSVLLQSWCLAM AVRNPPDRLHFVFLDFKGGSAFSVIERLPHTVGSVCDLDLNHAVRALRALELELRRREHL VAAERVGSIGQLQSPPPSLIVVIDEFHALNNQLPDYVDRLVRIASLGRSLGMHVIACTQN PLGQVSADMKANMALNICLRVRDGLQSIELLGDGRAASISPSAPGCAWRNDGESVEPFRC AFVSDIGAMVEAARTAAAFHGLVHASALFTAPLPRIVEADMLPARSSDVPSVPFALADDG IGIDVAELAVNAGNVGIIGSAGRGKSTILALLAHRSRDILGLCVRWTRREGRAFVTSTVR HHRRVRFSSESPPPVSPHLLWLVDDADTLFDPFGTDPLCARLKDALGDHDVTVVFAVETS KHIRIPEHCGTRIVFPTGERTVDLMDGIPAGLLSQCGPDDIMTAGRAVLLREGNALWIQC AMAKI >gi|197324945|gb|DS990229.1| GENE 716 789045 - 790520 1521 491 aa, chain - ## HITS:1 COG:Cgl2840 KEGG:ns NR:ns ## COG: Cgl2840 COG1316 # Protein_GI_number: 19554090 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Corynebacterium glutamicum # 190 433 1 251 288 146 39.0 9e-35 MSEGNSGVSPQDNPPSFIPSGTRKRRPSGQVPRPSAAGEAVPGAGPQAGVPSRRQTSAGA QGTQSMPAAQDVIPSFTPNSSRRVSGSTRRSASEQDARLQPVSPMQDAASAARRQPRRAA GSTHTISNQPRPGEGAGAQSMFASAQRQGPQSPYGYGMPAAQGGGRGMSGRPAATAMRRK RPVGRIVASVLAALLVVIMLVTFGLWNWVDGHLDKQPWLSDKANTSGTSWLILGSDQRTG EEAKTITGFRTDTILVLTKPNSGTRSLISIPRDSLVQVNGTYMKINAVAQLSGEKALVQQ VETITGQKIDHVAQIKFNGLKDVVDALGGVDLCYDQTVNDALSNLNWTAGCHTADGATAL AFSRMRYSDPKGDFGRAERQRQVIGAIAKKAMSGKTLTNIPKLNKTLKAALASITVDSKT NPYTLAQMVFAFRDATSDNGISGSVYWTNPGYNVSGVGSSVLLDDAKNLELFRELASGSH KPGAVGTLANQ >gi|197324945|gb|DS990229.1| GENE 717 790564 - 790746 132 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRLTFVKSAPCQCSAEGRKCGKRHQPSPPCLPHSLSHPTTSPSRMCRYCRGMGNGHDNDS >gi|197324945|gb|DS990229.1| GENE 718 790745 - 791101 558 118 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0757 NR:ns ## KEGG: BBIF_0757 # Name: not_defined # Def: transcription factor WhiB # Organism: B.bifidum # Pathway: not_defined # 20 118 1 99 99 183 100.0 2e-45 MCVITLMDVHSSIGKEERHMWGVVDDSAEDPMSELWGLFKSDDDVSWQHKALCSQTDPEA FFPEKGGSTRDAKQVCARCEVREQCLQWAIEHDERFGIWGGLSERERRRYKKEHKERA >gi|197324945|gb|DS990229.1| GENE 719 791135 - 794284 3095 1049 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0758 NR:ns ## KEGG: BBIF_0758 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 1049 1 1049 1049 1895 99.0 0 MSSTGNSDIQRILADVMANRPYSHRQDVDPTVVAVVTAEEDMRFLPDTMGALLRQTVLPG VIVIADCAGGDNPPVQSQFQVIPAPSGLVSSVPQPKTVTVELVGVKGARSFYHGVAKALH DAQLDSSTRAVWLLHDDSRPADDTCLESLLETWRNDPTASVLGAKQLDWQAEHLHDVGAY AYRHRVESLVVDGEPDQEQYDGRRDVFSVSLAGALVSIETMHELGGADDWFTTFAESEDF CRRVCLSGRRVVVVPQARIAHRRARFEGVRTKGGEPVDEDRPIDSSMARIRGRMRYSYTD TRLMMWPFVWVFGVFAAIGKAIAKLFAKRPYEALCELVAPWTLWGGLPRAIAARRRVSRQ ESVPIGRLGVLVANRQQVAQWHDRVQALSDQRHVVLLSPLAKAHLRRRAIQRWLLAVAMA LVCFGVVAVMHGTTLRAVLSGASLYSDSLLPTGGDFGQLWRAATTSWVFGDGIAAPPAPW LLVWGLASVITAGNVSAAIALVTFAAAPLMALSFWAFAGVFTRSDAVRVACGLLWASFAL GLGLFSAGDVPMLTVMVFLPAAFAFVFRAVGLYRTEDQVTAHPSVQAAALAALCFVPPVA AEPQLMLSLIVVFVVFLAVVPRHRAMLLLIPLPSGFVIAPTIISAVHHASEGSWRQLFGD VMVPLSARNGAPDASGFAMLTMRAFGVDDTAGNGLAGLSAAGVFGIGVLVLLAVVTVLAV ASLFLPFALRASRMMWVVTLSGGALAVASSRIVVAVDDDGPVAGSVLPGVVFALLGLLAC VGLVSGMAVHRFSLLRQGNGSQPVLTRLEGRKAKNAKVHAVFARIGRGALVAMLVAGAVS CTAASAMEPGSNGLHASRSDDGLPMVATDYLGKDDAHRVLAITAESSTGVRYTTMRTSRG DLMDSSPALRARVADGGHDSRDAVLSSASARLLVSADADAIADISALGYGGLYVVRPSAD DGGSQATEQLISNITASEGIQSVVSNTSGVYYRLTLVDSATQRVPQDGMLKQRHLAYRYA WLVCMGVVMGLYCVVAFPRSHRRFIEEDQ >gi|197324945|gb|DS990229.1| GENE 720 794281 - 795792 1309 503 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0728 NR:ns ## KEGG: BBPR_0728 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 503 1 503 503 746 99.0 0 MSSQVKRGGKVWKAVVGVISTVIIVGLFVALLVLTASGRWVDSVSSDSASVSHAVSQRRI TAYCPSRMTLPDASAYGDSEYQPSEGDISSSAGFAAFGAVYRSQFGAFGGSGDTTQLKDL DPTDTAKVIAASADVDRTSLLFDTQLLESAAGVGASASVASWATKGDLRGLSATFCDVGA LEQSFVLPDTQTGTTQQLVVANSSSKATVVDVRVWGTEQSGALALSTGSTLTVAANAESV LSLSAAASGQKGLYVTVSSRQTPVSASVRVIRTEGLNPKGSDYAAAAGEASKELVFPAVA EGGKATLTVYAAGSGSLTAAWVGAAGQSVHQYSGDRVTTIDLGDVPKDASALKITADTKV TAGVTVSRDGNGNQSDFALIGAAQTDDRSAAVIPSGLDGRVSVVNASLSSKQMHMTGYDD KGAAVGEKTITVDAGAAASFDASDLGKNVFAVAADGKGLSWGVRLSSSAVSDAKLAGIAY IGATPLMPLQERIWARSDMTIVH >gi|197324945|gb|DS990229.1| GENE 721 795865 - 796293 290 142 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0729 NR:ns ## KEGG: BBPR_0729 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 142 1 142 142 248 98.0 6e-65 MQQAPWERPTYRNRHGRGMRTPMFGTRLPRYRTRSGAFDDMVAAQIRRLNGAWPQLVKPV QFAVEDVPPSQPAPWEPEPSFASQCFPASHGIPARIVLYRMPIQSKSRSRMDLELDIRDE VVLRLAELYGRRPDEIDPDWSL >gi|197324945|gb|DS990229.1| GENE 722 796372 - 797199 710 275 aa, chain + ## HITS:1 COG:L165449 KEGG:ns NR:ns ## COG: L165449 COG0561 # Protein_GI_number: 15672552 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Lactococcus lactis # 22 265 3 249 252 139 29.0 6e-33 MPTATVHAWNDTGWRHDGAHARLIAFDLDNTLAVSKQPMKPDMTVRIEALTELMPVAIVT GGGRELVISQVLDVLGPRADLSNLHVMPAGGSSYYRWREGAWRLEYERTLSARDRDAAIL SLTRRARELGMWPEHPWGEPIEDRGSQITFSALGQLAPIEEKRRWDPDDTKKRRLVAAVA GDLGHLRVRAGGYTSVDVSAGNTDKAFALRELAGRLGIGIGDIIFVGDRMTPGGNDYPAA QAGAIALQVTGPQDTVRLCDILLPLLGGEPVRQDG >gi|197324945|gb|DS990229.1| GENE 723 797593 - 797919 241 108 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0731 NR:ns ## KEGG: BBPR_0731 # Name: not_defined # Def: putative phosphoribosyltransferase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 108 131 238 238 191 97.0 7e-48 MRNVTNSLARSLRRRGMDVDTAALLRTTKTSGKSVQMHGTAQRSRRLQGHIVIAARPPYP RNVILVDDIVTTGTTARQCAQALNAAGIHVTTVICLARTLRAGENTDD >gi|197324945|gb|DS990229.1| GENE 724 798026 - 798421 380 131 aa, chain - ## HITS:1 COG:PSLT055 KEGG:ns NR:ns ## COG: PSLT055 COG1974 # Protein_GI_number: 17233502 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Salmonella typhimurium LT2 # 2 126 17 137 140 96 45.0 9e-21 MPIVTEMVAAGFPSPALDGREEGFSLDAHVIKHPEYTFIATVAGDSMEGAGIFHGDWLVV DSSLTPEDGDVVVAVLDGELTVKRLLSRDGRPMLHAENPRYPDFVPSEHGDVVIWGVVTG SFHPQRRLRRK >gi|197324945|gb|DS990229.1| GENE 725 798490 - 799596 1220 368 aa, chain - ## HITS:1 COG:RSp1162 KEGG:ns NR:ns ## COG: RSp1162 COG0642 # Protein_GI_number: 17549383 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 47 358 196 510 512 156 33.0 7e-38 MKPRQKWDRKQARLDFDRPIGLFSSLKMELSVLIVIATSIAFVLVWFLLKYGWSGWIAMP LTMIVALGITYFFSRGLIAPLRQLRDAAEAMSEGDYSVRVHVATNSNDEIGQLARTFNEM AEELQHADQMRRDVVANVSHELRTPVSALQAMVENMADGVVEPTPANLEGILGQTHRLSD LIAFLLDLSRMEAGAASLNIERFCLHDFLDETIEPLEIADAGHAHDIMLHVDSDIWMEGD QDRLRQLFTNIIANALKHSADGTSVLIEARENADTGTIVTNVVNFGSQIPVEERSDIFRR FVKGRSGPGTESGGTGIGLSIARWAAQLHGGTVRVVDDPRGADFEIVLPKYHIADDEPAT DGSARALL >gi|197324945|gb|DS990229.1| GENE 726 799596 - 800315 1077 239 aa, chain - ## HITS:1 COG:BH3157 KEGG:ns NR:ns ## COG: BH3157 COG0745 # Protein_GI_number: 15615719 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Bacillus halodurans # 14 238 5 236 239 181 43.0 1e-45 MINSPTRQTTPRTILVVEDEPTLATAIAQRITAEGWSARVASDGASAVQAAKQLRPDLVI MDIMLPVMDGLEATKRIVADRPVPVLILTARDAEADKVIGLGAGADDYMTKPFSMRELIA RCKALLRRVERAKVIAKNSENEKILNFGSLVIDPAQRLVTVNGEQVHLTPTEFDLLVTLA RKPKSVLTREKLLEEVWDWVDASGTRTVDSHVKALRHKLGSETIRTVHGVGYAFEPPEQ >gi|197324945|gb|DS990229.1| GENE 727 800329 - 802584 3233 751 aa, chain - ## HITS:1 COG:Rv1326c KEGG:ns NR:ns ## COG: Rv1326c COG0296 # Protein_GI_number: 15608466 # Func_class: G Carbohydrate transport and metabolism # Function: 1,4-alpha-glucan branching enzyme # Organism: Mycobacterium tuberculosis H37Rv # 9 749 10 730 731 742 51.0 0 MATYTNINEDIAPVPVNQSDLSAVSNATFYNPHEVLGGHLGSGDHAGTVTIRVLRPLAKS VTIYTQKGTAEARHEFNGVFVAVIAAEKTADGWAVPDYRVCTTYEGGKSVMEDDPYRYLP SIGDMDAYLFGEGRHERLWEALGARVRRYDDPMGGADGAPGHQVVGTSFTVWAPNAHAVR VVGNFNSWDGRRHAMRELGSSGIWEIFIPGVKAGEVYKYELLNANHEWKMKADPMERSHE IPPATGSIVVESDHEWNDEAWMDHRRHTDPHAGPVSIYEVHAGSWKKGIGNYRELADELV DYVAKEGFTHVEFMPLTEHPFSGSWGYQVTGYYAVDSRLGNPDDFKYLVDKFHRAGIGVI MDWVPAHFPKDDFALGRFDGTPLYEDPDPLRGEHPDWGTYVFNFGRREVRNFLVANACFW LDEYHIDALRVDAVSSMLYLDYSRKPGQWRPNIYGGRENLEAIDFLKEANATAYKNNPGV MMIAEESTAYPGITAPTDAGGLGFGLKWNMGWMHDTLQYLHETPINRKWHHNEITFSMVY AYSEHYVLPISHDEVVYGKGSLFGKMPGDDWQRYAGVRALFAYQWAHPGKNLTFMGNEIA QYGEWNHDGSVDWDALNWPDHRGVQKLVADLNEFYKDTPAIWSQDFDPAGFQWLTSDDAD HNTLSFLRIGSKGEQLVVVVNFSGEAWQDYQVPLPQGGNWTEVLTTDDKKYGGSDIHNGT FAAVKGEYHSRDWSAKLTIPALGAVFLKPEN >gi|197324945|gb|DS990229.1| GENE 728 802559 - 802753 138 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTRIDDHIADLVPHESSVKTIYLTLHIMPYNRDDGNTPDTTRQNLAIVPRRYYPLCYGYL HEHQ >gi|197324945|gb|DS990229.1| GENE 729 802712 - 803308 799 198 aa, chain + ## HITS:1 COG:MT3689 KEGG:ns NR:ns ## COG: MT3689 COG1329 # Protein_GI_number: 15843196 # Func_class: K Transcription # Function: Transcriptional regulators, similar to M. xanthus CarD # Organism: Mycobacterium tuberculosis CDC1551 # 1 157 1 155 162 162 59.0 5e-40 MGYKVGDMVVYPRHGAARVEAITERVVKGVKREYLQLTVLSSDGLVINVPVENAQKVGVR DIVDANEVAKVFEILRTPIVEKEMNWSRRYKLNVEKLATGDVNKIAEVVRDLAQRDVDEH GLSAGEKRMLTRARSILTSEIALSEDLDEAEIQRLLDVNLGFSEPKPGDEKHHSEAPAEP ADRTLARIESESKKSRRK >gi|197324945|gb|DS990229.1| GENE 730 803327 - 803803 175 158 aa, chain + ## HITS:1 COG:ML0322 KEGG:ns NR:ns ## COG: ML0322 COG0245 # Protein_GI_number: 15827086 # Func_class: I Lipid transport and metabolism # Function: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase # Organism: Mycobacterium leprae # 1 158 1 156 158 143 56.0 2e-34 MNAVPAIGQGFDAHRFAEDPARQLWLAGLLWDGAGIEGDSDGDVAAHALIDALLSAAGLG DIGGLFGVGADAPGAGMHGCDMLRRTVDVLRSHGRMPSSASVVIIGNRPKIGRRREEAER ALSDAVGCRVTVTATTTDHMGFTGRGEGIAAIANALVM >gi|197324945|gb|DS990229.1| GENE 731 803814 - 804650 1291 278 aa, chain - ## HITS:1 COG:ML0335 KEGG:ns NR:ns ## COG: ML0335 COG1108 # Protein_GI_number: 15827091 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn2+/Zn2+ transport systems, permease components # Organism: Mycobacterium leprae # 6 266 13 272 286 108 39.0 9e-24 MTGISFSFDPDWMYTLSAPFMTNAFLAGLCISLAAGVMGYFTIARHSTFAAHALAHIGLP GATGAVLLGLPVSLGMGVFALGGALVIGALGKRATQREIATGTVLAFATGLGLFFARLSS SASQQMQSILFGSILTITTDQILGFAVFDVILLAVLAIVYRPLLFSSVDEQVAQAKGVPI GLMNVAFMAIMAGVITIAVPAVGTLLIFALVITPAATANAIVASPFKAMVIATVLCLVSI WGGLVLSAMFPAPPSFIIVTLSTLFWAIAKGVTSLRHR >gi|197324945|gb|DS990229.1| GENE 732 804647 - 805537 1130 296 aa, chain - ## HITS:1 COG:ML0336 KEGG:ns NR:ns ## COG: ML0336 COG1121 # Protein_GI_number: 15827092 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type Mn/Zn transport systems, ATPase component # Organism: Mycobacterium leprae # 5 251 15 263 275 150 37.0 4e-36 MHSNSGDREQRPDCIVFSNASVKRGERLIWQHGDFSIPAGSVTAIVGTNGTGKTTMMKTE LGLLPLAGGTVHVLGRPAGEMNRQIGYVPQSYTSDIDSNLTAEQSVLLGLTGTRFGVHFV TKAQRAKVKEAMTFTGIADKAHYRLSELSGGLRQRVAIAQALVCGPKLLMLDEPLANLDL ASQRAVVHVLARLNKELGMTIQVVAHDLNMLLPILTGAVYLLDGHPHYAAMNDVLDSKLL THLYGTKVQVVTTPQGDMFVTPTPDEADDVVPDTHDTSEVAQFHHHEYHERKGRAQ >gi|197324945|gb|DS990229.1| GENE 733 805705 - 806748 1299 347 aa, chain - ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 56 286 111 346 511 112 27.0 1e-24 MNIHPHRLVTGIAAILATGMLMASSACGTGGGSQSEQPSAKEPTGPITVVASINQWGSLA EQIGGTDVNVTSILSSTNVDAHDFEPKTSDVAKLQKAQIIVSNGAGYDSWATKSVGRNST IVSAAETVGAMEGDNPHLWFSKDARNGMATELTEAFSKALPAKKKAFQSRLKAWQKEEKA IEKSMGEFAANHKNATYGATEAVAYYLMSDMGFQDDTPKGFARSAASGGEPAPADLQEFQ SLIESQGISVLVNNTQESSDATNMLTGTAGRAGVPVFDVSEQMPQAYTTLTDWIADLVAR LDKTVSRAIIDDSDESGSSDGKDGASAKNDAGNSADDKSDTGAGSSN >gi|197324945|gb|DS990229.1| GENE 734 806862 - 807737 1089 291 aa, chain + ## HITS:1 COG:Rv3356c KEGG:ns NR:ns ## COG: Rv3356c COG0190 # Protein_GI_number: 15610492 # Func_class: H Coenzyme transport and metabolism # Function: 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase # Organism: Mycobacterium tuberculosis H37Rv # 3 290 4 281 281 296 55.0 2e-80 MTIKLDGKRVAAEVKANLAERVSTLKEHGIVPGLGTLLVGEDPGSMKYVAGKHADCAEVG IRSIRRDLPADASFDDIAAAVRDLNEDPACTGYIVQLPLPRGVDENAIIGLIDPSKDADG MHPYNLGELVLHVQGDITTPLPCTPRGVIELLDAYDIDLNGKEVCVLGRGITIGRTIGLL LTRKAVNATVTLCHTGTRDIADHMRRADVIVAAMGSAGFVKPENVKDGAVLMDVGVSRVF DEQTGRFRIRGDVDKACYDKVSAYSPNPGGVGPMTRAMLLANVVEMAERKM >gi|197324945|gb|DS990229.1| GENE 735 807885 - 809357 2486 490 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282840|ref|ZP_03646162.1| 30S ribosomal protein S1 [Bifidobacterium bifidum NCIMB 41171] # 1 490 1 490 490 962 100 0.0 MAENNTEVTKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE GVIPSRELSIKKDVDPDEVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK EADGVVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR NNVVLSRRQYLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQIVKGK VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKPGEEVFVKVIDVDLDRRRISL SLKQANDSVDPASEDFDPALYGMPAEYDEQGNYKYPEGFDPNTNEWIAGYEKQREEWESQ YAAAHELWEEHKAFVAKELENAAASAAEDGQAPKEEKVEETSNYSSDNSSTGTLADSDQL AALRDQLLGK >gi|197324945|gb|DS990229.1| GENE 736 809339 - 809956 134 205 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313139999|ref|ZP_07802192.1| ## NR: gi|313139999|ref|ZP_07802192.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 95 205 1 111 111 212 100.0 1e-53 MLDVVQPFACAGSGVTAEHTLGEPRPIERSVGQQRVRAEHGGDPWQRHSPGRHDLMRKSV IVDDQRAEFPHPGGDGALARGDASGQSDTNAHDIMLFATRPVSWQRWKAIFLTLAAFRHF TDSRMAGLLDIRACRGCSRQPGSEDDRHRAKTTLSLAMLDRSRRRERDMKNGNHPCGAIP VFLSAGKSYRHSTSSRDVMTHLPSS >gi|197324945|gb|DS990229.1| GENE 737 809681 - 810289 613 202 aa, chain + ## HITS:1 COG:MT1667_1 KEGG:ns NR:ns ## COG: MT1667_1 COG0237 # Protein_GI_number: 15841086 # Func_class: H Coenzyme transport and metabolism # Function: Dephospho-CoA kinase # Organism: Mycobacterium tuberculosis CDC1551 # 3 189 2 183 208 113 39.0 3e-25 MSIRIGLTGGIAAGKSTVAARMRELGALVIDYDGLAHEIVAPGGVALPRIAAVFGPDALL ADGSLNRAWLAERVFGRDAAPGARERLDDIEHPLIYAEAARLERRNPGAKVIVHDVPLLT EVIRSIPFQFDHIVTVEAPEQMRIRRMVATRGMTERQAADRIRSQSSTAERRELADIVID STRPIPDMLAQVDGLYRRWKAH >gi|197324945|gb|DS990229.1| GENE 738 810468 - 812579 3018 703 aa, chain + ## HITS:1 COG:MT1669 KEGG:ns NR:ns ## COG: MT1669 COG0556 # Protein_GI_number: 15841088 # Func_class: L Replication, recombination and repair # Function: Helicase subunit of the DNA excision repair complex # Organism: Mycobacterium tuberculosis CDC1551 # 5 701 41 736 739 922 69.0 0 MGFNIERADKPFVVKSPYKPSGDQPQAIEELATRIENGENDVVLMGATGTGKTATTAWLI ERLQRPTLIIEPNKTLAAQLCAEFRELMPDNAVSYFVSYYDYYQPEAYIPQTDTYIEKDS NINDDVERLRHQATANLLTRRDCVVVATVSCIYGLGTPEEYAGRMLFLQEGQQIDRDQLL RKFVGMQYKRNDIAFTRGTFRVRGDTVEIIPVYEELAIRIEFFGDEIDRISTLHPLTGDV IDHETSVHIFPASHYVAGPERMEHALKTIKEELDQRVAELKKQGKELEAQRLTMRTTYDL EMLTQVGVCSGVENYSRHFDNRAPGTPPHTLLDFFPDDFLLVIDESHVTVPQIGAMYEGD ASRKRTLVEHGFRLPSAMDNRPLKWPEFLDRVGQTVYLSATPGDYELGLSDGVVEQIIRP TGLVDPKIDVRPTKGQIDDLLAEIKDRVDKNERTLVTTLTKKMAEDLADYLLERGIKVEY LHSDVDTLRRVELLRELREGKIDVIVGINLLREGLDLPEVSLVAILDADKEGFLRSYRSL IQTIGRAARNVSGTVIMYADETTDAMRKAIDETDRRRVRQIAYNKEHGIDPKPLIKKISD VNDMLAKEDVDTATLLEGGYRNAGKAGNTHLGVPSLDAAEADKRHEEILKAGLPAQDLAD LIRQLSEQMHTAAEQLQFELAARLRDEIRDLKKELRQMTEANK >gi|197324945|gb|DS990229.1| GENE 739 812615 - 813616 1367 333 aa, chain + ## HITS:1 COG:Cgl1921 KEGG:ns NR:ns ## COG: Cgl1921 COG0861 # Protein_GI_number: 19553171 # Func_class: P Inorganic ion transport and metabolism # Function: Membrane protein TerC, possibly involved in tellurium resistance # Organism: Corynebacterium glutamicum # 7 327 2 329 369 269 46.0 5e-72 MLVDMSETPVAFMIATFAVLIAFFVVDLFVIGRKPHVPSTKECVQHIAFFVVMALIFGGL VWCFAGSKPAIEFYSGWLTEYSLSIDNLFVFVIIMSNFAVPKVLQKYVLSVGITVALILR GCFILVGAAIVQRFTWVFFLFGAFLIYTAIKLVVGGDDDEEYHENGLIRMLRKVIRITDD YDGEKLRTEKDGKSYWTPMLIVFLTIGTTDVMFAFDSIPAIFGLTKDPFIVFTSNVFALL GLQQLYFLLGALLDKLVYLPVGLAFVLGFIGIKLVMEALSGNTLPFINGGHPVSWVPEVP TWVSLVVIVVAIGSSAIASVMKMKSVEAAKSEA >gi|197324945|gb|DS990229.1| GENE 740 813758 - 815200 2319 480 aa, chain + ## HITS:1 COG:Cgl2036 KEGG:ns NR:ns ## COG: Cgl2036 COG0469 # Protein_GI_number: 19553286 # Func_class: G Carbohydrate transport and metabolism # Function: Pyruvate kinase # Organism: Corynebacterium glutamicum # 2 477 5 469 477 417 50.0 1e-116 MRKAKIVDTIGPSTESPEGITKLVEAGMDVARLNRSHGTPEDHLKVYNNVRAASKATGRN VAAMVDLQGPKIRCGWFKKNAEGEDKVQLEEGQEFIITTDDVEGDEHITSTTFKGLPGDC HPGDPILIDDGKVRLEVTKVEGNNVHTKVVVAGPVSSHKGINLPGVAVSLPALTEKDEAD LRWAIRTGADIIAMSFVRFATDIDRAHEIMDEEGRRIPIVAKIEKPQALENLEDIVKTFD GVMAARGDMAVECPLEEVPLATKRIIELARQYAKPVIVATEVLGSMVHSPVPSRAEASDC ANAVLDGADATMTSNETAVGEYPTETVATMSRISGFATEHGFDRIPELKNLDMSSTGAVS SAAVDLAEKLNAKAIVAYTQTGNTVHRVSRERPAAPIYGLTTNEHTYHWLALSWGTEAFL LDEDYHDKTRKDLMAFTDKVLKNAGKVSDGDKIVVLSSAQGEHAAGSTDTIYVHTVGAND >gi|197324945|gb|DS990229.1| GENE 741 815409 - 816014 630 201 aa, chain - ## HITS:1 COG:BS_yqkG KEGG:ns NR:ns ## COG: BS_yqkG COG0494 # Protein_GI_number: 16079418 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Bacillus subtilis # 61 195 46 181 185 75 38.0 9e-14 MSMDSDTYRPFDPWRPTPVKEESRKQIVETHYFNVDRVAFSSAQVGQFERFILHENNGDT VGVLAVTADGKIPFVEQYRIPTHRWTLEIPAGHANAPSEQYLDVASRKLREEAGYEASKL TQFTRFINTPSFSSQYTALYLATGLKEVDRSAIGPETPRPAVRLYTQQEAMEMVTNGTIV DAKTIIAILRLHEGLLEHIGM >gi|197324945|gb|DS990229.1| GENE 742 816416 - 817192 1042 258 aa, chain + ## HITS:1 COG:MT1662 KEGG:ns NR:ns ## COG: MT1662 COG3707 # Protein_GI_number: 15841081 # Func_class: T Signal transduction mechanisms # Function: Response regulator with putative antiterminator output domain # Organism: Mycobacterium tuberculosis CDC1551 # 27 252 2 206 208 168 46.0 1e-41 MVARKKTSTQEQEGQVEEVLSADELKAVSEGEPVESAVHKKRTVVVAEDESVNRMDLVAM LEDNGYEVVGEAANGEEAVDLTRKFRPDIVCMDVKMPRMDGIAAAGVICDENIAPVVMLT AFSQPDLVRQATGAGAMAYVTKPYEESKLLPALEVAMGRFSEINDLLDNVETSENKLKET EEQLKKAEEKLKKAEDTLEERKLVDRAKGLLMDKADFSEQGAFRWIQKTSMDQRIPKKRL AMAIIAKYGDPKPSEVGE >gi|197324945|gb|DS990229.1| GENE 743 817189 - 820020 3512 943 aa, chain + ## HITS:1 COG:ML1381_2 KEGG:ns NR:ns ## COG: ML1381_2 COG0749 # Protein_GI_number: 15827719 # Func_class: L Replication, recombination and repair # Function: DNA polymerase I - 3'-5' exonuclease and polymerase domains # Organism: Mycobacterium leprae # 429 943 66 578 578 451 50.0 1e-126 MSESRDDAQTKTRGTLLVVDGHSLAFRAFFALPAENFSTQAGQATNAVWGFATMLSQVLD SEKPDHLAVAFDMKGGTFRNEMLPQYKGTREAAPEDLLTQLPLIQKMLTALGVTYVEKQG YEGDDIIATLAAMGERSGYDTLVLSGDRDAFQLIDERVTVLYPGHHFKDLKHMTPQAVED KYHVGPAQYPDLAALRGETADNIPGVPGVGDGFAAKWINQYGGLEGIIEHADEIGGKKGE SLRENIEQVKLNRKVNALRRDVDLGIGIEDLTFGEVDADALSELFTSLEFGPRTRSKVLK SFNAGKRAGDAADKHADDENTSDDLRIPEAVTIADEAALAAWIDSARDGLGSPADNSDDE PRNRAHCADVMASTCALYAEGSSKPGNPGCSVLMLEVGGKAAVLEAGVIAGVRPALQRFL DGHADRIVVHGYKEQSHILASLGLDLAEPWFDTKLAGYLVQPDYHADSLEQAASHFLQLQ LDNADDVAQGQLDLSGDVDPADQRKDLLHMAMVRALADMLAAKIDEREQFRLLQSIELPV SHVLFGMEQVGASVDFMRLTEMRDRFAIDARDAQETAWQFAGSRVNLQSPKQLQAVLFDD MGLKPTKKTKSGSYTTNASALQDLAVRSVGNERANGFLTALLRHRETNKLKQIVQSLIDA VNPDDGRIHTTFEQTVAATGRLSSVDPNLQNIPNRNAEGREIRSAFVPGEGYESLLSSDY SQVELRIMADLSGDDALIEAFRSGADFHKYVASLVYGIPVDDITPDQRTHVKAMSYGLAY GLSTYGLAQQLKISPGEADRLKSQYFATFGKVHEYLESLVAGAREKGYTETMFGRRRYFP GLQSPNRNIRDAAERGALNAPIQGSAADIMKIAMIHASDALAKAKVRSRIILQIHDELVV EIAPGEAEQVTGLVRDAMEHAVDLAVPLDVSTGIGSDWQLAAH >gi|197324945|gb|DS990229.1| GENE 744 820078 - 820995 926 305 aa, chain + ## HITS:1 COG:CAC1303 KEGG:ns NR:ns ## COG: CAC1303 COG0327 # Protein_GI_number: 15894585 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Clostridium acetobutylicum # 4 217 5 214 268 117 32.0 3e-26 MTTLRQVVNVVETLYPLRYAESWDAPGLIVGEPGADVGLVAFAADPTMAVIDEAIERGAD LLICHHPLLFRSVHAVSGQDVHGAIVGKLYSHHCALWVGHTNADSAWRGVGQAAADAFGL VDQRPLVPIDDPGSAHAVGLGRVGLLEEPMTLERFAHRVAQALPATNLGIQVAGDLQSLV RRVAVLPGSGDSLFDEVRASGADVYVTSDLRHHPATDALEQARYEASLLSRGLAAPSAGN TGTAGNAVARPALINTPHSAIESLWFRYAPDDIAAAVERATGETIRTTHITMNTDPWTLN IPCRG >gi|197324945|gb|DS990229.1| GENE 745 821049 - 821780 641 243 aa, chain + ## HITS:1 COG:SP0989 KEGG:ns NR:ns ## COG: SP0989 COG0494 # Protein_GI_number: 15900864 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Streptococcus pneumoniae TIGR4 # 51 227 8 180 181 67 30.0 3e-11 MPDRSTADTVGTAETVGTAAASDITRQVDALLDRSTDGIVMDSRDRRAVVLSRQTVYQGA VFDVEDMRIALPAGGGDCVTVRRQVCRHAPCVVMLVHDEARDLYLLEREYRVGSDLFAYG LPAGLMDDGEDVEQAALRELAEETGVVPVGEDGVIFDHVGAFYSSEGMSDELANIMVMHL RRWESRPRRFDPDEHVESAWVTWRQLAGVPVTASNSVIAIQHETIQRIMKKTTSIHGKTN IVC >gi|197324945|gb|DS990229.1| GENE 746 821813 - 823984 2698 723 aa, chain + ## HITS:1 COG:Cgl2054 KEGG:ns NR:ns ## COG: Cgl2054 COG1523 # Protein_GI_number: 19553304 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Corynebacterium glutamicum # 13 716 10 717 836 941 61.0 0 MFTLACDNMTMQQIRPGSMYPLGANYDGSGVNFALFSQVADKVELCLFDEDDKETRIEMT EQNSYVWHNYISGIQPGQRYGYRVYGPYDPAKGMRCNPNKLLLDPYAKAIEGNIDGDESL FSYRFADPDGPMNDLDSADHTMKSAVVNPYFDWGNDQHPNTPYHDSVIYEAHVRGMTNLN KDVPPQIRGTYAGLAHPSVIEYLKKLGITALELMPIHQFVNDSFLQEKGLSNYWGYNTIG FFAPHNAYACSGQRGEQVNEFKAMVKAYHRAGIEIILDVVYNHTAEGNDMGPTLSFRGID NQSYYRLVDGDPRHYFDTTGTGNSLLMRSPHALQLITDSLRYWVTEMHVDGFRFDLAATL ARQFQEVDKLSAFFDIVEQDPVISRVKLIAEPWDLGSGGYQVGGFPSSWSEWNGRYRDCV RDFWRSQPSTLPEFASRLLGSSDLYQVNGRRPVASVNFITAHDGFTMNDLVTYNNKHNMA NGEDNRDGESNNRSWNCGVEGPTTISDVNNLRQRQLRNLFSTLLVSQGIPMICGGDEVER TQQGNNNAYCQDNEISWRSWDSTPEQEDLLQFVSKLIHLRLEHPVLHRRRFFSGREPGED VSTIPQIEWFDHTGSIMDMDDWSNTHAFSMMVFLNGSRIPETDWYGSPMIDNDFILIFNA HYEPIMFTLPSERYGKKWQLLIDTYNPKGPELSYEAGFAITAQARSFLLLKSSDCPAVRR EDS >gi|197324945|gb|DS990229.1| GENE 747 824060 - 825532 1431 490 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0784 NR:ns ## KEGG: BBIF_0784 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 36 490 1 456 456 879 98.0 0 MALFAYLCAHGRRFGAHLGTQIRTTHPTHEQAPRRIPVIVPRRPVITPYRRVTISSRTAP LPGHQRNTAAKPHEYNGYPDGERGVMGRHQRAETLGLISFLICAMVGAIMMSLYMQFAPA IWQITQRRFMVCAGILAGCAALSFCVGYASHSHSLNLHRGWFAPIRRVFEILALSIVYAA TVFLSSFALLGAINGMMGSATFSGYLTPICAGFAGVVGYMTFVQAEMMNAKTLASLLPFF VISGVCTAGLTTDDPYWYHNNFSQLGDRTTFAARMFNSTLMLAGTCIIIVSYFAISELIT TERIQRARHQMNKSTGTAADDRDIAHFTLRIAILSLLLTISGLMFIGIGAFRYTPHPIMH NVCAKGLTVIMGVLMLSLPWLAPRIPKVMSVISALAILICSAIGIRMLMGQETLTNLEAL AGLLFLGWFIVFSRQIAAIEADRLQDQLMMLQTGTGDSTGAGPGNPARDADGSGTNEQVA ELQSRLSNDR >gi|197324945|gb|DS990229.1| GENE 748 826072 - 826239 183 55 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224282852|ref|ZP_03646174.1| ## NR: gi|224282852|ref|ZP_03646174.1| hypothetical protein BbifN4_03389 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 55 1 55 55 76 100.0 6e-13 MFLAASIRFGVIAIAATGGFDGTYIWGIVLAGVVGVAQTVYALVNQAFDGRLSKA >gi|197324945|gb|DS990229.1| GENE 749 826549 - 826827 161 92 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282853|ref|ZP_03646175.1| ## NR: gi|224282853|ref|ZP_03646175.1| hypothetical protein BbifN4_03394 [Bifidobacterium bifidum NCIMB 41171] conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] # 1 92 1 92 92 152 100.0 1e-35 MLFVDSSCSRQGVASLLLGQVERFADAAGIDRLTVHASITARLFFMQCGFRASPTPDSRR RQRSTTADSNRAPLSLGTFGSGLPALAVRLRS >gi|197324945|gb|DS990229.1| GENE 750 826876 - 827106 199 76 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282854|ref|ZP_03646176.1| ## NR: gi|224282854|ref|ZP_03646176.1| hypothetical protein BbifN4_03399 [Bifidobacterium bifidum NCIMB 41171] # 1 76 1 76 76 128 100.0 1e-28 MIRRYRPDAAEATMAVFRRPATGIASRDYNSEQIRAWAGHTGTPGQWNERRITVHTWVAE TAKYPLEDPIRESSET >gi|197324945|gb|DS990229.1| GENE 751 827343 - 827540 352 65 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282855|ref|ZP_03646177.1| ## NR: gi|224282855|ref|ZP_03646177.1| hypothetical protein BbifN4_03404 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 65 7 71 71 109 100.0 7e-23 MLSCIATTVMATALTTALPPIAKDLGVSMQTGQWLTSGYSLAMGACAAPLIIIPIVFLRG KQENH >gi|197324945|gb|DS990229.1| GENE 752 827675 - 828112 462 145 aa, chain - ## HITS:1 COG:no KEGG:Dalk_0850 NR:ns ## KEGG: Dalk_0850 # Name: not_defined # Def: MarR family transcriptional regulator # Organism: D.alkenivorans # Pathway: not_defined # 1 130 11 137 191 66 36.0 4e-10 MNDKALAELFYDAARISHQRETRRDHSLIYGSGQSRCLLTVSGLGPVSQRRLAAILGIRS ASLSELLGKMEARGWVARTPHPEDGRTYLVALTEEGKAEAMRRRAADNGATGKLLEVLTA QQREQFAEILTVIKEHYQELDKQNL >gi|197324945|gb|DS990229.1| GENE 753 828226 - 828627 678 133 aa, chain - ## HITS:1 COG:BS_yraB KEGG:ns NR:ns ## COG: BS_yraB COG0789 # Protein_GI_number: 16079754 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus subtilis # 4 117 3 116 140 88 40.0 4e-18 MYTMKQTCEATGLAYETLKFYCNAGLVPNLKRDANNRRVFDDRNITWIKGLLCLRRCGLS IEEMRRYTELCFEGEPSIPERKQMLADKRARLVEQLAEIRDSIDFIDAKQRFYDGVLSGD IPYTSVLTPHPPR >gi|197324945|gb|DS990229.1| GENE 754 828793 - 829653 1204 286 aa, chain + ## HITS:1 COG:YPO2805 KEGG:ns NR:ns ## COG: YPO2805 COG0656 # Protein_GI_number: 16123003 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Yersinia pestis # 1 273 15 288 297 330 57.0 2e-90 MEIITLRNGVDMPKLGYGVFQIAKDDTACCVADAIETGYRHIDTAQSYFNESEVGDGIKA SGIDRKELFVTTKVWLEHYGYEQTLKSVEVSLRKLKTDYIDLLLLHQPFSDVYGSWHALE KLYKDGVVRAIGVSNFFPYRLADLIAFNEIAPMVNQIETNPFNQQVDAHAYMAEHGVVQE AWAPFGEGKSGMFTNPTLVAIGERHGKSPAQVILRWLMQRDIVALPKSTHKERMAQNIDI FDFTLTDDDMASIAALDTRTSLFFDHATPAAVERMATLVKERAGRE >gi|197324945|gb|DS990229.1| GENE 755 829779 - 830327 957 182 aa, chain + ## HITS:1 COG:PA4171 KEGG:ns NR:ns ## COG: PA4171 COG0693 # Protein_GI_number: 15599366 # Func_class: R General function prediction only # Function: Putative intracellular protease/amidase # Organism: Pseudomonas aeruginosa # 3 181 5 183 187 147 44.0 1e-35 MAVENAKVLIIVNNWGIEETELTRPLRDLKAAGAAVTLAAATLDPCETVSHDRYEGETLT PDALLSDVNAGDYDLLVVPGGTCNVDRIRVNEDAIAIAQEFAHEGKPIAAICHGAWLLVN AGLIAGKTAAPCRYIRADIENAGGHYVDEQLHIDDANGWRLITSRKPADLDYFVDAIKKT LA >gi|197324945|gb|DS990229.1| GENE 756 830422 - 831114 667 230 aa, chain - ## HITS:1 COG:no KEGG:Closa_2529 NR:ns ## KEGG: Closa_2529 # Name: not_defined # Def: hypothetical protein # Organism: C.saccharolyticum # Pathway: not_defined # 20 230 82 280 281 124 36.0 4e-27 MLGVIGGMPADASMRQMQRAVDECFQARYRSHEAGIRVFADEPVERLQVNAVVYSARRHE AWLFGDCQIMVNGVQTPTTKDVDVLLGDLRAFTVLALREMQDGTPDVPISGSFGAPASDA APKDPSRAMILPFLRLQSQFANKRGPFGYFVFDGFTDMTYPIRTVPVSPGDEVVLASDGY PLLRPTLDESERELQRLRSEDPDLIDRYRSTKGFQGRATFDDLTYLRFIA >gi|197324945|gb|DS990229.1| GENE 757 831271 - 832083 579 270 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282861|ref|ZP_03646183.1| ## NR: gi|224282861|ref|ZP_03646183.1| hypothetical protein BbifN4_03434 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 22 270 22 270 270 455 100.0 1e-126 MEFVIGAVIIIAAVAIAIWAATSHQGGAGAAPDASASATSPSRRDADGKVVSRTSSRDGD TGIATTVVTLKDGTTTVTRTMPDDSSTSTTTAGGLGAGSLQELAASVQAEYLSRLGSYTL GPGAHEDSRREMFDGQWRDKLDRAANNYNVYLPSGFRQFDFCVNRAIDDYMRVGRPYGTP SAYTYRYSERTTSSFNPTPCAFVFDMCSFGTPVPQWDADMAALRQAVASTGERDVTERDD GNHHIILVDGSVGDATRNILYRAFAQCARA >gi|197324945|gb|DS990229.1| GENE 758 832561 - 833178 561 205 aa, chain - ## HITS:1 COG:lin0382 KEGG:ns NR:ns ## COG: lin0382 COG3340 # Protein_GI_number: 16799459 # Func_class: E Amino acid transport and metabolism # Function: Peptidase E # Organism: Listeria innocua # 1 197 1 196 209 147 40.0 2e-35 MATMMLTSTLRGATGMIPHALPGLYGGRLAYITTAAAVEPWGFAHTMLARRQLRQLGFRV TELDVSTAAAPDVRSTLSYADCIYVGGGNSFFLLQELRQSGADALLAERIADGIPYIGES AGSVIMSPDIGYCSIMDRTDRAPGLRNYKGLGLTDFHVVPHLGNPTMGQAARLIVERYST ELDLRALTDRQSLLVRDGGITMLQS >gi|197324945|gb|DS990229.1| GENE 759 833219 - 834730 1204 503 aa, chain + ## HITS:1 COG:Cgl0740 KEGG:ns NR:ns ## COG: Cgl0740 COG0128 # Protein_GI_number: 19551990 # Func_class: E Amino acid transport and metabolism # Function: 5-enolpyruvylshikimate-3-phosphate synthase # Organism: Corynebacterium glutamicum # 60 501 13 429 430 334 45.0 3e-91 MRALTDERSNARGGVWRSPGPVAGNDDMGANDSADADGKCHNSNEDDTIGRMSETNNDNL WPAPTADGPLNATVTIPGSKSLSNRYLILAVLGAKPVTLVGLLRSRDTELMMGALSALGV RCDIDPENDTTVTVTPPESGRFSGNVGVYCGLAGTVMRFVPGLALFADAPVRFDGDDQAY ARPMQPVLDGLEQLGARVEYHGEHGRLPFTITPPRHDGKQADDGSAAAKVSIDSSGSSQF ISGLLLIGSRLPGGLELRHTGEKTPSLPHIRMTVADVNGASGNATADEESRVWRVGHAAL QLPERVVVEPDLSNAAPFLGAALIAGGTVRVPHWPAETTQPGGLLPGYLERMGARVSFPE EDGVRYCEVSGDGHVHGLGDFDLTAAGEIAPSLAAILAFADAPTRMLGIGHLRGHETNRL EALVTEITRIGGEARELEDGIEITPVPVERLHGEVMESYADHRMATFAAMIGLAVPGVRI VNVETTRKTLPDFVGMWTGMLER >gi|197324945|gb|DS990229.1| GENE 760 834844 - 836073 1866 409 aa, chain - ## HITS:1 COG:Cgl2695 KEGG:ns NR:ns ## COG: Cgl2695 COG0282 # Protein_GI_number: 19553945 # Func_class: C Energy production and conversion # Function: Acetate kinase # Organism: Corynebacterium glutamicum # 6 396 5 397 397 376 49.0 1e-104 MAKTVLVINSGSSSIKYQLVDLESGEGLASGLVEKIGEPVDGHYKHEYNGEKHELEEPIH DHEQGLRRVLGFFKEYGPDLSEAGIVAVGHRVVQGGSLFPKPALVTDKTINAVKDLAVLA PLHNGPEAKGAEVMRALLPDVPQIFVFDSSFFFQLPKAASTYALNKEIADQYHIRRYGAH GTSHEFISSVVPGVIGKPAEGLKQIVLHIGNGASASAEVSGKPVETSMGLTPLEGLMMGG RTGDIDPAVVFHLIRNAHMNVDELDTLFNKRSGMMGMTGFGDLREVHRLVAEGNEDAKLA LDVYVHRIVSYIGNYTYQMGGCDVITFTAGVGENDDIVRKMVCDKLAPFGVKLDEEKNAK RSKEPRIISTPDSSVIIAVIPTNEELAIARKSAEIAENGADTYGNTFTK >gi|197324945|gb|DS990229.1| GENE 761 836354 - 838024 2540 556 aa, chain - ## HITS:1 COG:MT0421_2 KEGG:ns NR:ns ## COG: MT0421_2 COG0280 # Protein_GI_number: 15839794 # Func_class: C Energy production and conversion # Function: Phosphotransacetylase # Organism: Mycobacterium tuberculosis CDC1551 # 231 556 6 330 334 330 54.0 5e-90 MTTTNIYIASPEGANGRNVVAYGVLKALTTKFKTTVFRPAVSNHDHFTPILLNASNAGLG VALSTGLDIHQVRKDKEGSRGDIVAAFNDAMNVSRADAALIVGTDKSHVNDPTAYEFNAN IAADLQAGVFLAVCTIDRWPDELKDTVRLSIEGMEAAGNKVLGIFVTGCEPRHSVSVKDT LADFGLPVWTIPQIPFTEASQADAALAAFQANVPTEEVLRAINVEIDFPITSYAFQYSLL GRAKANKKTIVLPEGEEDRIIKAADYLLEREIANLIIVGDKGAILARGAELGLTHLGKAR FQAMDDENILKPMVAKLCELRAKKGMTEEQARKQLTDASYFGTMLVVLGYADGLVSGAVN STANTVRPALQVIKTKPGQRLVSGAFLMCFKDHVTVFSDCAINLNPDAEQLAEIALQSAV TAKAFGIEPKVGMLSYSTLGSGKGPDVDIVEEATRIVKEKAPDLPVVGSIQFDAAWSPDV AATKAKGNDVAGHVNVFVFPDLCSGNIGYKAVQRSSGALAIGPVLQGLNKPVNDLSRGAT VQDIINTIALTAIEAQ >gi|197324945|gb|DS990229.1| GENE 762 838165 - 839799 1979 544 aa, chain - ## HITS:1 COG:SP0341 KEGG:ns NR:ns ## COG: SP0341 COG4868 # Protein_GI_number: 15900271 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 53 544 3 494 494 583 55.0 1e-166 MRLEAAHIAEFHSQILVRPPAASRLVGGGPRKEPGIIVQVQRSVRKGLSLHMRQGFDNEK YIELQAANIRKRIAQFGGKLYLEFGGKLFDDYHASRVLPGFEPDSKFRMLKSLADDVEIV IAINANHIEKAKMRGDLGITYDEDVLRLIDIFRSRGFHVGSVVLTQYAGQPAADTYRRRL DQLGITCYLHYPIAGYPHDIEHIVSDDGYGRNDYIVTTRPLVVVTAPGPGSGKLATCLSQ LYHENKRGIAAGYAKYETFPIWNLPLNHPVNIAYEAATADLDDANIIDPFHLEAYGKTTV NYNRDVEAFPVLKAMMERIMGESPYQSPTDMGVNMAGYAIVDDEACRDAARMEIVRRYFA ATVHLRRTGTGEDQVERLRSIMKKAGVDKDLSPARSAALLKEETTGAPAGAMVLPNGRVV TGKTGELLGAASALLMNALKAVTGIDENQRVIDESAIEPICRLKTEHLSSMNRRLHSDET LIALSLTSAQSPTAARVIGGLEQLRGCDAFFSVIISSTDEELYRKLGINVCCEPKYERLS LYHK >gi|197324945|gb|DS990229.1| GENE 763 840211 - 840564 219 117 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0791 NR:ns ## KEGG: BBIF_0791 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 95 1 95 223 183 95.0 2e-45 MRELSIFVDESRSDGLSDRHYLLTVVMHDQSESIADSIAAYEGALRAKGLPDIPFHASPL MNGKGQYSGLDLRTRKMLLGSFRVFFRHMPVRSATRSAMPEPSLELATVWSLVRWPL >gi|197324945|gb|DS990229.1| GENE 764 840669 - 840866 134 65 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0792 NR:ns ## KEGG: BBIF_0792 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 65 1 65 65 119 100.0 3e-26 MVNILTTLFPAFAFLGIILFACDRQDKRKIELEKVKAKAEWDRASECFRDDVTQEGFEEI VEATG >gi|197324945|gb|DS990229.1| GENE 765 840887 - 841528 391 213 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0793 NR:ns ## KEGG: BBIF_0793 # Name: not_defined # Def: hypothetical protein with DUF1294 domain # Organism: B.bifidum # Pathway: not_defined # 1 213 1 213 213 329 100.0 4e-89 MEQALSALGGAVQGVHPFVIYLAGINALTFILFAIDYAIARYNQDEDTGLMDGRILTLFA VAGGALGMLLALMIFTRNHMNKHNIAWWFSAIVFLIVWVLVVLVWAGVIVVDLEPGASFN APVIVALGAYLLAINVITFAVFCLDKKRAIDRGSRFPEATLLGLSLAGGALGGIAGMRVA HHKTSKWYFAVGLPAFIILHVALFLLAHGAGLV >gi|197324945|gb|DS990229.1| GENE 766 841956 - 842258 116 100 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSYALLRLAPMYSCISITVIHSSRPRLPSGAAHFVACAMVASNLSARYVCAVLCAFTSA RRLNRLTAIDTPDRSGDGSRWVELVGPSRNGHEPYALAGS >gi|197324945|gb|DS990229.1| GENE 767 842140 - 842358 208 72 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0794 NR:ns ## KEGG: BBIF_0794 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 72 1 72 72 134 100.0 2e-30 MAHATKCAAPEGNRGRDEWMTVIEMQEYMGASRSKAYDLIWPGEIDSYRLGRKLLVSRAS VDAYIESRGGRK >gi|197324945|gb|DS990229.1| GENE 768 842328 - 842543 56 71 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282871|ref|ZP_03646193.1| ## NR: gi|224282871|ref|ZP_03646193.1| hypothetical protein BbifN4_03484 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 71 1 71 71 67 100.0 4e-10 MASRLMRSIAHASSAPNIALVDAMSLIWLLLMLLVMVVLELLSSRGSLACPAAGGSRGGR RRHFLPPLDSM >gi|197324945|gb|DS990229.1| GENE 769 842464 - 842751 235 95 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0795 NR:ns ## KEGG: BBIF_0795 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 95 1 95 95 189 100.0 2e-47 MRLIASTNAIFGADEACAMLRISRDAMYRLTNMPQTCWNCHKAIKPQHKGSALLVAPHCS LIGENEKQSTAKRRGHRWLYGRKMPIFDSKGRHHW >gi|197324945|gb|DS990229.1| GENE 770 842717 - 842971 224 84 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140032|ref|ZP_07802225.1| ## NR: gi|313140032|ref|ZP_07802225.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 84 1 84 84 133 100.0 5e-30 MRHVFKGKKLGWGDDKTEGVWFDADHYTKEEAEAEFKPYQGVTQRGYDYTGYEYDGERYH HYTYLGEFEDDDMPTSDADLWNRK >gi|197324945|gb|DS990229.1| GENE 771 842792 - 843334 206 180 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0796 NR:ns ## KEGG: BBIF_0796 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 180 2 181 181 307 99.0 2e-82 MIAFPIILVPSVVITSLSNPLIRLELRLSLFFGVVVSIEPNALGLIIAPAELFALEYVSH GIHTFTNDSRLGYCSTLPFSSFVFSAYPTNCLVFRCPDVPTASIPVVAKLMPELHLAPFP LISTLRLRNVPEAITPLNDNSREVTAVASFSAERELNACYIRAVRHNALMPSTGASAKNP >gi|197324945|gb|DS990229.1| GENE 772 843268 - 843480 83 70 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRSASGLLLAVGATPSNACLGWMPAKQARLVVSGGDVGAGSWPCTSCWFYGFLALAPVDG MSALWRTARM >gi|197324945|gb|DS990229.1| GENE 773 843551 - 843820 300 89 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPWVSADCGVYGIYKPATQSLKLFSWDNCLLVRFKVLSITEATPSIHFKLMLTGRLLLLA RDRSGWYSNCTHDVLSIDWLVFIDVGNEY >gi|197324945|gb|DS990229.1| GENE 774 843875 - 845437 2440 520 aa, chain - ## HITS:1 COG:Rv3396c_2 KEGG:ns NR:ns ## COG: Rv3396c_2 COG0519 # Protein_GI_number: 15610532 # Func_class: F Nucleotide transport and metabolism # Function: GMP synthase, PP-ATPase domain/subunit # Organism: Mycobacterium tuberculosis H37Rv # 196 520 2 321 321 476 74.0 1e-134 MANGPVLVVDFGAQYAQLIARRVREANVYSELVPHSMPVDEMLAKDPQAIILSGGPASVF EPGAPRVDPKLFDAGVPVLGICYGFQAMAYALGADVDKAALGEYGKTDTTIDKTDGLLAG SPAEQDTWMSHGVAVKTAPAGFEVLAHTEGAPVAAMQDESRKLYGVQWHPEVKHTPLGQK LIETFLHQCAGLPDNWDASSIIEDQVAKIREKVGDAEVICGLSGGVDSAVAAALVHKAIG DQLTCVFVDHGLLRKGEVEQVKHDFVAATGIRLITVDAADDFLEALKGVSEPERKRKIIG EKFIRTFEKAQRQVLEEAGARGKEVKFLVQGTLYPDVVESGGGDGAANIKSHHNVGGLPK DIKFQLIEPLRTLFKDEVRAIGTELGLPDEIVWRQPFPGPGLGIRIIGEITRERLDLLRE ADAIAREELSRAGLDRDIWQCPVVLLADVHSVGVQGDERTYGSPIVLRPVSSEDAMTADW SRVPYDVLATISTRITNECRQINRVVLDCTSKPPATIEWE >gi|197324945|gb|DS990229.1| GENE 775 845482 - 845646 73 54 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGDIVDCGHWYCVDFLQYVTSIVAIRADIGVCDGRVSSGSDAPFHKTEQLTLLI >gi|197324945|gb|DS990229.1| GENE 776 845966 - 848443 3486 825 aa, chain + ## HITS:1 COG:BMEII0881 KEGG:ns NR:ns ## COG: BMEII0881 COG3957 # Protein_GI_number: 17989226 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoketolase # Organism: Brucella melitensis # 15 804 8 789 792 844 50.0 0 MTSPVIGTPWKKLNAPVSEEALEGVDKYWRVANYLSIGQIYLRSNPLMKEPFTREDVKHR LVGHWGTTPGLNFLIGHINRFIADHGQNTVFIMGPGHGGPAGTSQSYLDGTYTETYPNIT KDEAGLQKFFRQFSYPGGIPSHFAPETPGSIHEGGELGYALSHAYGAIMDNPSLFVPCIV GDGEAETGPLATGWQSNKLVNPRTDGIVLPILHLNGYKIANPTILSRISDEELHEFFHGM GYEPYEFVAGFDDEDHMSIHRRFAELFESVWDEICDIKAAANTDNMHRPFYPMIIFRTPK GWTCPKYIDGKKTEGSWRAHQVPLASARDTEAHFEVLKNWLESYKPEELFDANGAVKDDV LAFMPKGELRIGANPNANGGVIRRDLVLPALEDYEVKEVKEFGHGWGQLEATRRLGVYTR DIIKNNMHDFRIFGPDETASNRLQASYEVTNKQWDAGYISDEVDEHMHVSGQVVEQLSEH QMEGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRKPIASMNLLVS SHVWRQDHNGFSHQDPGVTSVLLNKCFHNDHVIGIYFATDANMLLAIAEKCYKSTNKINA IIAGKQPAATWLTLDEARAELAKGAAAWDWASTAKTNDEAQVVLAAAGDVPTQEIMAASD KLKALGIKFKVVNVADLLSLQSAKENDEALTDEEFADIFTADKPVLFAYHSYAHDVRGLI YDRPNHDNFNVHGYEEEGSTTTPYDMVRVNELDRYELTAEALRMIDADKYADEIQKLEDF RQEAFQFAVDKGYDHPDYTDWVYSGVKTDKKGAVTATAATAGDNE >gi|197324945|gb|DS990229.1| GENE 777 848682 - 849743 1362 353 aa, chain + ## HITS:1 COG:SA0619 KEGG:ns NR:ns ## COG: SA0619 COG0306 # Protein_GI_number: 15926341 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate/sulphate permeases # Organism: Staphylococcus aureus N315 # 33 353 20 335 335 179 35.0 5e-45 MTLLDVSFSYFIQQVCSNPALAITTLLTLGVIFVNGWTDAPNAIATCVTTRCLRIRPAVI MAAVLNFFGVFIMTQLNASVASTISNMVDFGGDTNAALIALCAALFSIVVYSVGASLLGI PTSESHSLIAGLSGAAIAIQDGIGGINMGEWVKVLYGLAVSLLLGFGIGWIVCKLVTLIC AGLDRRRANVFFTYAQIVGAAAMSFMHGAQDGQKFIGVLFLGMAFCSGQTGVAGVIIPVW LMILCSTIMGVGTSVGGERIIKSVGQDMVRLEKYQGFSADLSSALCLLVMTVLGIPVSTT HTKTSAIMGVGAVRRLSAINFGVVRDMMLTWVFTFPGCGIISYVMAKLFMLVF >gi|197324945|gb|DS990229.1| GENE 778 849794 - 850417 787 207 aa, chain + ## HITS:1 COG:CAC3094 KEGG:ns NR:ns ## COG: CAC3094 COG1392 # Protein_GI_number: 15896345 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate transport regulator (distant homolog of PhoU) # Organism: Clostridium acetobutylicum # 1 207 4 210 210 105 30.0 7e-23 MARKNDSFYFDGFKQSADYACQAAHLLSEVMHHYEPDRLLERFDEMHRIEQAADEVRHGM MDELVTAFITPFDRDDIARLSSVLDDVTDRIEGALHRMYYDNVLEIRPDALDLVDMVERS CGKMAELIGELPRFKRSKTLREQVFFINKIEQDADRLFVEAMRRLHTTCTDPLQVLAWHE VYVHLELCTDDCEHVADVVDNIVMENS >gi|197324945|gb|DS990229.1| GENE 779 850466 - 851158 927 230 aa, chain - ## HITS:1 COG:CAC0240 KEGG:ns NR:ns ## COG: CAC0240 COG2197 # Protein_GI_number: 15893532 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Clostridium acetobutylicum # 1 226 1 205 208 124 33.0 2e-28 MRIAIVDDDPIVCQSLETILTATGTADVLWSANDGGAAIRRHFESPENHPDILLIDIQMP GMNGLDAAREILTKDPAARILFLTTFSDQAYIEQAMRLGTKGYLIKQDVAAIAPALHAVM AGQVVLGADVIGKLTGPTAGAGYKGPDDASDTAGDGIPHGRRTSDGIDQLLNERERDIAA LVAEGLDNRDIAARLYLSEGTVRNRISAMLDKLALTNRTQLAIAWFNTHR >gi|197324945|gb|DS990229.1| GENE 780 851155 - 852438 713 427 aa, chain - ## HITS:1 COG:DRA0009 KEGG:ns NR:ns ## COG: DRA0009 COG4585 # Protein_GI_number: 15807681 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Deinococcus radiodurans # 188 377 131 302 336 77 30.0 5e-14 MRVLAEEGVLLALGTVLAVMTGIRTDAVFIAGLLLAVSVTGLVEWLHADERWPWLPCVAY LIVAAAVPAWCSFMPLVAYDMARLAAAGHPSRLVTAVRWLWVLPFAALWFVRVSHAGVAA GAADANSHMQALALTLTALLGFVAGRSREASDGNRRALLHAQDMAREASRSVRSRIADID EERAQSVRMATLGERTRIAREIHDNVGHLLTRAIMQAQAGRAVAEATDDEVAARGFTTLG ETLDDAMTMVRRSVHDLEDDGTDFAAQIEAAVASFDGISPDFSVSLANDVDTAPAPVSRC FATVIREALANVAHHSEAHEASVTLRDFPTLWQLVVQDPGPAIRARDARGRRRTDGEPPR GMGLTDIESRVRSIGGTALCGPYDGGWRVFVSVPKQRWHASPGSCAKTDQPAFMKTTAGT SGNRGKQ >gi|197324945|gb|DS990229.1| GENE 781 852501 - 852764 413 87 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0803 NR:ns ## KEGG: BBIF_0803 # Name: pacL1 # Def: calcium-transporting ATPase # Organism: B.bifidum # Pathway: not_defined # 1 87 1 87 87 158 96.0 7e-38 MPIVVDNPRGGSLTMGLFSNRTINIGIVTEIVLLVLITEVPVLQTVFHTAPLGWDDCVYL CCIPFVILGIEELRKLIWRYSFPTERV >gi|197324945|gb|DS990229.1| GENE 782 852908 - 853891 1204 327 aa, chain + ## HITS:1 COG:CAC0241 KEGG:ns NR:ns ## COG: CAC0241 COG1131 # Protein_GI_number: 15893533 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Clostridium acetobutylicum # 20 327 3 310 310 272 43.0 8e-73 MATDNTAPGRDVAPDAVPAVHVSQLVKRYGDMVALDYFDLDVTQGEIFGLLGPNGSGKTT AINCILALLTYDSGTIRVLGQPMTPTSYALKRRIGIVPQNVAVFNELTVTENIDYFCSLY VPGKADRAPLVEEAIEFVGLQDFRKFRPGKLSGGLLRRLNIACGIAHKPDLIFFDEPTVA VDPQSRNSILEGIRRLNRSGATVIYTSHYMEEVEQICDRILIMDHGRHLALGTADELKNM IDTGERITIETLDLTDAALTDVRALPCVIEAVYGGKELNIRCRRGEHNLTDVLDAVKRSG ANIGHLTSHPPTLNDVFLELTGKALRD >gi|197324945|gb|DS990229.1| GENE 783 854008 - 855255 993 415 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0805 NR:ns ## KEGG: BBIF_0805 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 415 1 415 415 773 99.0 0 MWTTFLVALKANLRNRQALFWMIVFPIVLATMFNGFFGGLSEGYELKPIPMAVVEDSRWQ QADGARTFVDALSGETASSSESLDGTAYADINQQLLTITAADTVRKAEQLLADGTVRGYL AADGNGRLAITISRETVTAANDTTGSVGLDISLSALRSAIDLYNRTDAVTRQTIADNPQA ALSRNFWNSIGQSVDVTHETTLTHFQPNAIARYYYALLAMSCMIAMGYSISTVSTAQANL SALGIRRTVAPLSHARQLIAGFLACWLCASVALLIALAYIRFICDISFGGREPVTVVAVI IAAFMTSSAGTLLGAVPKLSYDTKYGLSSGIACTLSLFTGLYGGFAMQISDWIARNAPIL GTINPAQQVTNLFYDILYYDSYQPFITTCAILLAMSAVFLLAGIAMLRRQRYEHL >gi|197324945|gb|DS990229.1| GENE 784 855242 - 856681 1045 479 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0806 NR:ns ## KEGG: BBIF_0806 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 479 1 479 479 816 99.0 0 MNTCKATLRVLFSHRAYLLIYLVFVGIMMLSISWSMLSGTSDSAAAAFEPAKMRVAVIDR DSDRGGIASSMRTYLSDSSELVNVDDASETLQQAVASNWVDLIVIIPDGFADDFIDAAAT GENPPSVDTVTSYTSGAGSMARMNVIGFLSLTRTALIGSHTTVDSAALAAMAGIDIGDTA GDSSEDGMGGFGEFSNQDMLDMLPAGQIEKPSVGDLFEASKAAAASASDMDANHKVAVID TASADAESASDMAASRFGNTMKTALYPLFLAMTVCGSMILGIFTTGEVRRRLTASPQRMS SMGLQRLLTLSGFALVVCVGYLVLAVGLMVAAGLDPLTLSAEGVLMTFCATCVYALMTVA CGFMLSEFGFSEAAANGFANIFGLLIMFTSGVALPVDMMPGVMVTIAKFLPGWWYCTAID NALGFGTAAESGVSVAGWAGSLGLVALFGVMFICIGLAAGRFRRSRPTLAAPATTQLAE >gi|197324945|gb|DS990229.1| GENE 785 856686 - 858164 1638 492 aa, chain - ## HITS:1 COG:Cgl0025 KEGG:ns NR:ns ## COG: Cgl0025 COG2865 # Protein_GI_number: 19551275 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Corynebacterium glutamicum # 13 421 10 419 563 186 31.0 1e-46 MVDDYTAKMTELIELMRMIGNDTQQCEVKECKRKISSTITDTLSAFSNGSGGWIILGLSE KNGFTPVEGFDARAMQEALSQACEKMTPVVRPVIVTCPFEGANLVFARIDEMLPRDKPCF TTALGPHGGSFIRTGDGDRRMTSYEVDRLIEEHLQPTYDLDIVPGATTDDLDPQLVAGLL ARVREQHPRVFADRDGIDVLLDLQVLRHDDSDESEVGGILRPTLAGLLALGRYPQKFYPR LGISIAVFPGTSRDDVFRGDERLVASKSVVGSIPVMIDDAVDSLMRWIGAKKPDYPPLVL REAIANALTHRDYSPDARGTQVHISVFTDRIEITNPGGLYGMVTHDVLASPHPVTGAPFV STRNQFLFTLLESTPYPGGGFVNPEGGDGYQRIAAALREAGIEPATTRNDINTFTMTITK QRTMANSSPGDVVKAIMTVLERHSAMSVKEIMRELQLTPLAATSGMRELMKEGRVARVKF ADDSVQRYRLKG >gi|197324945|gb|DS990229.1| GENE 786 858337 - 858837 188 166 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 1 155 162 312 317 77 36 2e-12 IAGRPPEADARSGFGHWEADSVIGMGCDLHTEVERRTRFLMARVIPDKTAERSVGARLAM FAPLPAAARLSVTHGNGTGFARHARLRDEPGMATCFADPYSSWQRGGNENRNGMIRRYLP KRTIIEPGMARELQEIVDETDNRPMRALGHRTPAEAFADELPDLQL >gi|197324945|gb|DS990229.1| GENE 787 859260 - 859388 176 42 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0064 NR:ns ## KEGG: BBIF_0064 # Name: not_defined # Def: integrase # Organism: B.bifidum # Pathway: not_defined # 1 41 1 41 350 77 92.0 1e-13 MGEVYSHLSEEERQVIQIEIGNGAGIRAIGAMIGRSPSKLAS >gi|197324945|gb|DS990229.1| GENE 788 859539 - 860018 429 159 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0809 NR:ns ## KEGG: BBIF_0809 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 159 1 159 159 267 100.0 1e-70 MSYMKKIASTLAAAVASVAFALVPSVALANGTDSVPYEANATVVVAPNAPEGSELIFDLE TKTFTDIVLPNGRTLKPSRGCTNNTSACWAGGGALGDMEFTGTGAVNGNWPSRSSFYSNN KSADIGFTWKGERVYVSQIAANRKFTPNGSVDGFYVTRY >gi|197324945|gb|DS990229.1| GENE 789 860100 - 860600 449 166 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0810 NR:ns ## KEGG: BBIF_0810 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 166 1 166 166 229 100.0 3e-59 MPREIGREPRRPEPEPVDELDEARRELADLTEWWKTEPPREVRDVQRIIDVAREASEKAE HANPFTRGWLRHAAERTAAEQSQLLKQTAPWLENTTIPATYAEANAFRTNASKATLDHMR KPYEDRVRRLNRSRFNERIKQRLAENIEKAKTTHEPIPQPHHRHSR >gi|197324945|gb|DS990229.1| GENE 790 860684 - 861061 491 125 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0811 NR:ns ## KEGG: BBIF_0811 # Name: not_defined # Def: hypothetical protein with MobA/MobL family domain # Organism: B.bifidum # Pathway: not_defined # 1 125 1 125 125 240 100.0 2e-62 MDVSNNPLDSTEFLERLRADWAKQCNLMLPEGVRIDHRSLEAQGIERIPTIHEGHASREI TKRGGHSILNAINRRIATANRYLTAIRKQMGDPTGLLGQFKEQARKELDTAMSRFRESLC SIASP >gi|197324945|gb|DS990229.1| GENE 791 861187 - 861525 257 112 aa, chain + ## HITS:1 COG:MT0414 KEGG:ns NR:ns ## COG: MT0414 COG2963 # Protein_GI_number: 15839787 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis CDC1551 # 12 112 8 108 108 67 49.0 9e-12 MGDDGTMAKGTRYTPEFKAKAVRLLAESRSSYSSETNAISAVAKDLGIAPESLRRWRNQS DATVAEETRQSAEDAMAELKKLRAENAQLRRANEILTTASAFFAARLDPTRR >gi|197324945|gb|DS990229.1| GENE 792 861660 - 862457 605 265 aa, chain + ## HITS:1 COG:Rv0796 KEGG:ns NR:ns ## COG: Rv0796 COG2801 # Protein_GI_number: 15607936 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Mycobacterium tuberculosis H37Rv # 22 263 73 311 312 148 40.0 1e-35 MRAGREALARAVLQIRSDFFMAVYGCGKMHAQLVAQGWDPAGVGRDRVMNIMRGLGIRGV RRGRTPVTTKPAKGTGGRPDLVDGRFEACAPNRLHVAGITYVRMANGSFGCTAFADGVYA RRIVGWACAMTMNTQELPLQALGQAISWAASRGGADGLIRHGDHGTQCTGTVYATGVMEY GVLPSTGTVGDSCDNAMAESADGAYRTELVWRRRPFADLKDLELATFRWVSWWNSKRLHQ SLGYRTPEAVETEYHQHQAAQAAPL >gi|197324945|gb|DS990229.1| GENE 793 862558 - 862776 246 72 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0814 NR:ns ## KEGG: BBIF_0814 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 72 8 79 79 149 98.0 4e-35 MVTNPPFSLFREYIAQLMEHDKKFVVIGNQNAVTYKEVFPLIKENRIWLGCYSGNMEFRV PGDYEAHSENDK >gi|197324945|gb|DS990229.1| GENE 794 863047 - 863256 113 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282893|ref|ZP_03646215.1| ## NR: gi|224282893|ref|ZP_03646215.1| DNA binding domain, excisionase family protein [Bifidobacterium bifidum NCIMB 41171] # 1 69 1 69 69 87 100.0 3e-16 MVTYAMYQAKLEERYSLALPKQLRDAVQQTAILLSEGKSVTISATEQELTTEQAAHTGSI ATDASQNVR >gi|197324945|gb|DS990229.1| GENE 795 863290 - 863544 386 84 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0784 NR:ns ## KEGG: BBPR_0784 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 84 1 84 84 157 98.0 9e-38 MGDYNEHIPDGAGDNGDADELVYQSEGCGKAAHCPLKRLGKGDTAVNIIGVAVSAVIVAA SIYAQYALTKWAVKSALKETRPHD >gi|197324945|gb|DS990229.1| GENE 796 863633 - 864247 678 204 aa, chain - ## HITS:1 COG:MT2103 KEGG:ns NR:ns ## COG: MT2103 COG1335 # Protein_GI_number: 15841531 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Amidases related to nicotinamidase # Organism: Mycobacterium tuberculosis CDC1551 # 3 200 2 182 186 156 44.0 3e-38 MAKALIVVDVQPTFCEGGELGVEGGNAVAGRIADYVNAHRGEYAYTATTQDWHIEPGAHW SGNPDFVDTWPKHGAAGTPNAELHPAIAALGIAHHFKKGQYSAAYSGFEGIEDNTDRIQT REEVTAEQSAGKTLANALKAAGVTQVDVVGIAESHCVKDTALDAKRLGFDVTVFEDLTVP VSEELGVTARKQMADAGIILAEAR >gi|197324945|gb|DS990229.1| GENE 797 864355 - 864636 317 93 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0786 NR:ns ## KEGG: BBPR_0786 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 93 21 113 113 178 98.0 5e-44 MENRGSRPFGYWDSSYRAKLRRTWIALPFCIVAAVAMPIFTAVKYGDVVSGLAFSVVLAV VWACQLMYAKSKAKAEAETRTAVPRYDDNELPR >gi|197324945|gb|DS990229.1| GENE 798 864773 - 864955 111 60 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTQSGASSMMYVRLWEGKPGTSLVRVPTVNHRGSTLEMVCPMLPRAMQSSAKIPYRPITD >gi|197324945|gb|DS990229.1| GENE 799 865208 - 865735 271 175 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 138 3 139 625 103 42.0 2e-22 MCGIVGYAGNVSATCGKPLQVCLQGLQRLEYRGYDSAGVALVASGMGHAVVRKKAGRLAN LVESVERNPMPPATAATGHTSWATNGAPSDVNAHPHPPRTLVVAISQSGETMDTLMALRH VCEQGSMVLSICNTQVASIPRESDAVRSSTRSRACRPRSNGCSTRRQARPDSAGR >gi|197324945|gb|DS990229.1| GENE 800 865758 - 866039 306 93 aa, chain + ## HITS:1 COG:Cgl2219 KEGG:ns NR:ns ## COG: Cgl2219 COG0449 # Protein_GI_number: 19553469 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains # Organism: Corynebacterium glutamicum # 1 93 533 625 625 104 53.0 4e-23 MPLERGRDVLHAKVRFGIEEVKSRVAFIIAVAEQGDRDDERYADVVFRRPECPTLMSPLV DVVPLQLFAMDMAEIKGYDVDKPRNLARSVTVE >gi|197324945|gb|DS990229.1| GENE 801 866078 - 866293 106 71 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0819 NR:ns ## KEGG: BBIF_0819 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 71 1 71 71 106 98.0 3e-22 MTNNKDKWLRALQAKGIRTPQDEVGRAGRHRHDAPEANPPKDRAGFRPVRGRSAKPFKAT GHKGGISRQGA >gi|197324945|gb|DS990229.1| GENE 802 866389 - 867744 2031 451 aa, chain - ## HITS:1 COG:CAC0872 KEGG:ns NR:ns ## COG: CAC0872 COG2233 # Protein_GI_number: 15894159 # Func_class: F Nucleotide transport and metabolism # Function: Xanthine/uracil permeases # Organism: Clostridium acetobutylicum # 3 436 2 431 435 217 31.0 3e-56 MSQKKTKNSVSFEALSSLDAPVSFWKGIPFGLQHVMAMFVANLAPIFIVANAAKMTSAQS AAVIQSGLLVAGLGTCLQLYGAWLIGSRLPMVTGISFTYVAAAAAICADKGYGAVVGAVI VGGLLELVLGLTARYWRRFVPPIVSAIVVTSIGFSLLTVGATSFGGGDASAADFGSWQNL TLGLISLVACLAFQLLMKGTAKQLSVLFGLVVGYAVAICMGKVDFSGFQELSVVSLPQLM PFKPEFDWGAIISIGLLYVVSSVEVLGDTAALTKVGLNRTPTERETAGAIAGDGLISSVS GLFGCLPLTSFAQNIGLVAMTKVVNRKVILSGGLILILASFVPAVAEAFNSLPQAVLGGC TIMMFGNIILSGFQMIAEAGFTQRNITIAALSLTIGIGFTQVSDIFAQFPALFRQIFASN CIAVAFVVAVILNAVLPGEERFLSAPAKNED >gi|197324945|gb|DS990229.1| GENE 803 867795 - 868376 758 193 aa, chain - ## HITS:1 COG:BS_xpt KEGG:ns NR:ns ## COG: BS_xpt COG0503 # Protein_GI_number: 16079265 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Bacillus subtilis # 1 191 1 188 194 174 50.0 1e-43 MKELEERIRRDGTVKTGDVLKVDAFLNHQCDVRLFDHMGQEWARHFAGKTITKILTIEAS GIGIACCAARHFGDVPVVFAKKAQSINLDGDQYTTTVYSFTKRKEFPVIVSKKYLDADDH VLLIDDFLANGKALHGLIELCHAAGASVEGIGIAVEKGFQGGGDELRAQGYDVDSLAIVE SMNPETGEITFRD >gi|197324945|gb|DS990229.1| GENE 804 868568 - 870571 2471 667 aa, chain + ## HITS:1 COG:BS_yrhL KEGG:ns NR:ns ## COG: BS_yrhL COG1835 # Protein_GI_number: 16079768 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Bacillus subtilis # 9 640 14 615 634 236 28.0 1e-61 MRNDRYGSLDGIKGFALIGIIWYHLSQRSLPGGFIGVDVFFTVSGFLLALSVLREIDRTG RLRLGNFYLRRLSRLWPAMAFMIAGSVSLGLFVNHDILVGVPGKSVSALTFTSNWGEIFS GDSYFAATSPQLLRHLWFVALLAQATLVLPLLTAMLHRIGSTFVQSLVPVLLAALSACGM WVLYNPSADPTRVYFGTDTHCFGMLLGVALAFVVRHSEESDAEPRRLFTMVMPWLATGAL VVLIMMMPRVGQDASAFRGGLILASVLTVVLIGGSISKDSWMIGLFGWRPLALLGKYSYG MYLWHWPLYLLLQLMLPGYRGSGLWVVQALTLLLSLVMTAVSWWMVENPVAEWIKSKRDK SAPRRTVAQRSAPRRVGSARARGVYGTHLNNVEFTQPYSQAAPLPSPQDAPVVASRSSRT AEAMRMVVTVSVVVLIVIGFFMGVAQAPAKTQTQIMLEKNQSALAKKERQRKMDAKAAAE AKKRAEEERKRREEAKAAIEKTLNGEDVSVIGDSVTVGASAALQKSLPGIAVDAQVSRSI LTAPGIVAQMKAEGRLRKYVVISLNTNSATTVGEYERIAAAAGDGHVLVIINAYGDREWI PVANQAASDYVRKHPTDSILVDWNSAIAAHTDWLGPDGIHPQAGQGEDLYASGLRNALAE WGVAHIE >gi|197324945|gb|DS990229.1| GENE 805 870635 - 873292 2955 885 aa, chain + ## HITS:1 COG:Cgl0831 KEGG:ns NR:ns ## COG: Cgl0831 COG0210 # Protein_GI_number: 19552081 # Func_class: L Replication, recombination and repair # Function: Superfamily I DNA and RNA helicases # Organism: Corynebacterium glutamicum # 14 705 12 694 763 674 51.0 0 MQQDPDLIARSAEELVGDLNPQQAEAVQYRGPALLIGAGAGSGKTRVLTRRIAWILTQFG AWPSQILAITFTNKAAAEMRERLEGLIGPVAQRMWVSTFHSACVRILRRDGQSIGLASGF SIYDTADCERLVKLIGADLNIDLKRYTPRAILSRISDYKNSLIGWQEQLKRYAPDYRPGQ RGYQIGNFGDIEVLYSVIYAEYQHRLAMANAVDFDDLIGRTVELLRTQPQVADYYRHKFR YILVDEYQDTNHAQYELIRELAGVDAAGQVVPDAPSAGRAGPAWITVVGDSDQSIYAFRG ADIRNIQDFEQDFPNAKTIMLEQNYRSTQTILDAANAVIANNQGRKPKKLWTALGIGDPI VGYAADNAEQEAAWIAGEIARVRAEEGTPYSDMAIMYRANAQSRALEGALVHAGLPYQLV GGTRFYERREVKDAIAYLQAIVNPADNVNMRRILNVPKRGLGPRAESIIVSYADAHATTF WDGIDHLDQIDGVPTRTGKQLAAFRDLMRSLSAFAAEHDGKPSEVVGEVLSQSGLLEELQ RSEDPQDASRVENLSQLQSVAAEFEQNTPDATLAGFLETTALVADSDQLPSEGEDSGKVT LMTLHTAKGLEYPVVFLTGMEQGTFPHSRAMEDADELSEERRLAYVGITRAKRRLYVTRA AVRAQWGQANEMMPSQFLDEIPDRLIDWKRRETGMEGMRSGWSRRGFDDEFGGWDDDDFG GTTYGGSSSYGGSSSYGSRGRSSYGGSSSFGSGSRGGSGSSYGGARGFGSSSRHGGSGRQ GSGQQYGSGSRFGSSTGLSRGGKVTTRRTAPKSSLSSAKPASSLSKDNNLNIADFHAGDK VTHDQYGLGTVVDTQDKGRNSVITVDFGSSGVKRLMLRVAPLEKL >gi|197324945|gb|DS990229.1| GENE 806 873468 - 873866 508 132 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0793 NR:ns ## KEGG: BBPR_0793 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 132 1 132 132 207 99.0 1e-52 MFRRLFASLPTIVFGVLIAVAPQAFAHVCEVKDNMPMACHYTAQAELGIGVVIALLGIIA LFCSPKIRTGLNIAVALNALLSLAVPTVLIGVCKGAMMHCHMVTRPTLIVIGILALLFAV VAIYLDSKPVKR >gi|197324945|gb|DS990229.1| GENE 807 873863 - 875077 1684 404 aa, chain + ## HITS:1 COG:FN1349 KEGG:ns NR:ns ## COG: FN1349 COG0577 # Protein_GI_number: 19704684 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 402 1 399 401 233 32.0 6e-61 MITRITLKRLPLENLKRRPFRTAALVIVVMMLTLAFFGGSLLSMNLRNGLRSMQERMGAD LMVVPQDTGAKAEALLTNGGSNTFYFTNDIENLVSKADGISQVTAQTYISSLAAACCDEK VQIIGFNPATDFVITPWITSQFDGTLKDGEVVAGSNISVSGNNTIKLYGHEFPVAAQLGS TGTSLDNSVFVNMSTIPSIVSYSSSVGHTAIPAEYADKAVSAILIKVKDGYDAKQVSLNI TKESGLEGLGFVYPGGVTATTKTNLDALVRYVTLFVAVFWIMGLIVLLAVFASAMNERKK EFAAYRIMGATRGTLIALIVKESALIGLVGGVIGIAGASLAVFPFNTLISRQLQLPYLQT DALKVVVLVAISLVFAVATGLLASIVTAVKLSAPETYLTLREGE >gi|197324945|gb|DS990229.1| GENE 808 875084 - 875899 243 271 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 23 263 21 217 223 98 27 1e-18 MAMLEINDLTREFTRRGARFAAVDHVSFSMDQGELVAIIGRSGNGKSTLLNLIAGLLKPT SGTVEIDGRNVSKLSDKELSQLRNATLGFVTQGQTLLGNLTVLDNVILPAVLFGPAKKTV VPDDVAAPGEADAAGAADSAREQDDADMPDVIDDDLTAEHEPDALERRATMLLDRLGVAD LSDSYPKELSGGEMRRVSIARALMNGPKLLILDEPTGDLDATSTTMVMRLLRNVADETAA VLIVTHDGDTLPYADRVYAMDAGRLTPAGGA >gi|197324945|gb|DS990229.1| GENE 809 876103 - 876729 1042 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282905|ref|ZP_03646227.1| 30S ribosomal protein S4 [Bifidobacterium bifidum NCIMB 41171] # 1 208 1 208 208 405 100 1e-111 MTNVQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRL RAQYGVSEKQLRSAYEKATRTAGQTGNAMLTDLEVRLDNLVLRAGIARTTAQARQFVVHR HILVDGNIVDRPSYRVKPGQTIQVRAKSQTMVPFQIAAEGVHRDVLPPVPGYLDVNLASL KATLTRKPEVEEIPVQVNIQYVVEFYAR >gi|197324945|gb|DS990229.1| GENE 810 876864 - 878849 2138 661 aa, chain - ## HITS:1 COG:BS_yrhL KEGG:ns NR:ns ## COG: BS_yrhL COG1835 # Protein_GI_number: 16079768 # Func_class: I Lipid transport and metabolism # Function: Predicted acyltransferases # Organism: Bacillus subtilis # 12 658 5 632 634 276 29.0 7e-74 MREQEQKGLPDSQRQIRFDGIDGLRAVAILGVVAFHTRPSLLEGGFIGVTMFFVITGFLA TRSVIRAVDSHGTFQYGRYLGRRIKRLWPATLATIALTAPFAWLFAPSLLNKVRADALPG ALFASNWVNIFRKLPYFAAAGLPSPLTHLWFLALVMQFYLVWPLLIMAIGRLVRAKWART VVMVIIVLASSAAMWLLFDPDDTSRVYYGTDTRLAELAMGAMLAMLMQRADRTADDRKQT DDGRGASAIILDVFGWLSLLALCAGFWFMNGYDDTMYHGGYLVAAILGALALAGAIRGVS LPRVLGCAPLRYLGSRSYSLYLMHYPLLQFMNPATRTEALPWWGWLIEAAVIWTATEAFY QLVEATRMYEPTPRSRHARASVEPSGRLRPGSWVMAALGIVTVAALTWAPVNWEQIAHDR MIQLRPELAEPAKPLALPKPKSIEKPSDDGTASNNATANQTNDDGSERNGDSAKPTSPSV TPIAEKVPDNLDVSEYHYDPNTGSCNADIMMIGDSVTSGTKDAIQAAFPNGYINGKPNRQ MPQAVSVFQQATTAGHSGSVIIYGLGTNGIIRNEQVVQQLIDLAGGKPVYFVTIRMPYPN QEKNNNSMMRAAASHNGNVGIIDWYKYSEGHGEYLYDDGIHPNMTGAYAYATMLRQAVCG Q >gi|197324945|gb|DS990229.1| GENE 811 879294 - 879470 104 58 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MENHTDDYSMLPACHKTRRAHRHRPLQSANAPAGGGGWHARHDWGGVVLSSMEQPLAS >gi|197324945|gb|DS990229.1| GENE 812 879459 - 880133 850 224 aa, chain + ## HITS:1 COG:lin0907 KEGG:ns NR:ns ## COG: lin0907 COG0406 # Protein_GI_number: 16799979 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Listeria innocua # 3 208 5 206 224 107 33.0 2e-23 MILHLHLVRHGQTTFNRYNRLQGWCNAPLTEAGLADADKAAEKLKYVRFAAAYCSDTSRA QITAKRILDVNEEVGNARPVLVSDMHFREQCYGYFEGQDMSLAWTAAGGPHGAKDYNDIV AKYGLAATRDFLKEADPFHDAESDAEYWARVHGAFSLIASNPDLKDGDDVLQISHGNTLL SLMHRFAPEGYDLSERPANGSVTCLDFDTTKPFEVALTVVSYNQ >gi|197324945|gb|DS990229.1| GENE 813 880254 - 880664 681 136 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0830 NR:ns ## KEGG: BBIF_0830 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 136 1 136 136 233 100.0 1e-60 MGVGQIAGLIAAIAFAVLAGFMIYPLIRLGKLFDQIADTVRESGEHAIPALDEGVTTVKQ VNKSLEDVNRISAAASSTANNVGALTDLYGSFLGKPVIKIASFFYALKSTAQSFVAKKST GRDSVEGSGQQESKAQ >gi|197324945|gb|DS990229.1| GENE 814 880664 - 880903 365 79 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0800 NR:ns ## KEGG: BBPR_0800 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 79 1 79 79 149 100.0 3e-35 MFKRLFWIGVGVTVGALAVIKAQAYVKANTPDAARAFVFGPDQDHVGMRTLEGLVNEFNA TRRAREAELNQHYIDRAAR >gi|197324945|gb|DS990229.1| GENE 815 881018 - 883696 3884 892 aa, chain + ## HITS:1 COG:Cgl1594 KEGG:ns NR:ns ## COG: Cgl1594 COG0013 # Protein_GI_number: 19552844 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Alanyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 888 1 884 888 721 45.0 0 MRTSEIAKRYLDYFSKHDHLVMPSASLISPNPTTLFTIAGMVPFIPYLLGEQTPPHKRMA SNQKCVRTLDIDEVGKTTRHGTFFQMLGNFSFGDYFKEEAIHYAWELLTTPQPEGGYGFD PEKLWVTTYTDDEEARSIWKNEGFDPEHMQIFGMEDNFWTTGGPGPGGPCSEIYVDRGPE YGKDGGPAADETRFIEIWDLVFENYEVDNVKSKTDLHIVGELNQKNIDTGAGLERLAYLM QGKQNIYETDEVYPVIEAAEQLSGRKYGEDAAADVKFRVVADHVRSALMIMSDGVRPSNV GRGYVLRRLLRRTIQAMRVLGVTEPVIPHLLPVSKDAMVASYPELEKTFHDVSESAYGEE DAFRRTLDNGIEILDVAVNKAKKTSDPVVSGDDAFTLHDTYGFPIELTLEMAADQGVKVD EAKFRELMSEQKSRARADALKKRHNVDLSVYDDFKKTLVQPIDFLGYTDMSARGRVLGIM QEGKGSVPAVSAPANVEVILDRTPFYAEAGGQLADQGEILSDDGAVLEVDDVQKPIKDLI VHQCRLTEGTLAVGTEVSASIDLARRGAIARSHTATHMVHKALREELGPQATQRGSEDAP NRLRFDFQWSSAPSKDVMNTVEARVNDRLRDNLIVTTTEMKFDDAIALGAMHLFGEKYGD VVRVVSIGEDGWSRELCGGTHVDHVGKIGSINIMSEASIGSGVRRVDAVVGQGAYEFNAR EHALVSQLSDKLNARPDELAERVNTLLAKLKESDRRLAAMYEGQLAASVPQLVAAAKTSA ARVKVAAKNVGHFGSFDALRKTVMDVRAQLGEDAPVVVALAGVSEDDKPMVAVATNEAAR KNGIKAGDLVRGASKMLGGGGGGKPDFAQGGGSDASRIDEALKALEAEALKG >gi|197324945|gb|DS990229.1| GENE 816 883705 - 884163 319 152 aa, chain + ## HITS:1 COG:Cgl1593 KEGG:ns NR:ns ## COG: Cgl1593 COG0816 # Protein_GI_number: 19552843 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) # Organism: Corynebacterium glutamicum # 4 148 19 159 182 71 34.0 5e-13 MVWLGVDLGDARVGLALSDPELTFAHPYGNIQAYGDSFRALDDVITVIEDEAVDHIVVGL PLQLDGTEGKSAKKARRWSANLEKRMRNLMDEHDFALYHIPQVTLLDERLTTVSAHRQLL EAQLGSRRHRPVVDQQSAVVILQTALDGAMKV >gi|197324945|gb|DS990229.1| GENE 817 884175 - 885362 1698 395 aa, chain + ## HITS:1 COG:Cgl1592 KEGG:ns NR:ns ## COG: Cgl1592 COG1559 # Protein_GI_number: 19552842 # Func_class: R General function prediction only # Function: Predicted periplasmic solute-binding protein # Organism: Corynebacterium glutamicum # 88 382 48 378 389 109 29.0 1e-23 MSDDLADFFEENTHWVDSKGNTTSVKPPRPPKSRREMRRRRNVRRRKTIIVLTMVVAVLV VVIAGGFFGVRALRAIRDRNDGDTYSVQDYSGQGYGSVEFTVSQGESPSSIAKRLVEAEV VKSADAFTGVSSGMTLYPGTYQLRKHMPASSVAAILSDQSKAEGFLDVNAGERVSDVIKK AAALSEIDESEFQKIIDAKGEGILPAEAGGNFEGWLEPGKYDVKGLGSAQKILKTIVDKR VSKLNEMHVPTGSERQRLLIIASIAEAEVNSPDYYGKVTRVILNRLDRDMTLGMDSTTAY GLGINGTQLTNAQLNDSSNKYNTRVNKGLTPTPISNPGDSAIQAAMNPEQGDWLYFVTVN LSTGETKFTTGSVEEQNAQFEQYVKEYKDNNKSAN >gi|197324945|gb|DS990229.1| GENE 818 885359 - 886024 580 221 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0835 NR:ns ## KEGG: BBIF_0835 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 66 221 1 156 156 238 98.0 2e-61 MRAPRPYPRRRLANASTTSSLVTRTPAGSPSIIATSASPCDSPAVCQRNMPCSFDSIGNF AISYVMTYLAYLPSLICGIAVSVEDIRRRRVPRLWIAIGCLTQLLAVIIVAVMANTMFLL VQAPLFAVLSAVLQAGLSMVKPGSMGFGDVTCTLAMGLAVGMAGLTAVVVWWLAMGLLGL AWMALWLRFDPQRRSDHAGKVPFAPAIVCAAVVAVIATTLL >gi|197324945|gb|DS990229.1| GENE 819 885876 - 887069 1297 397 aa, chain + ## HITS:1 COG:MT2615 KEGG:ns NR:ns ## COG: MT2615 COG0082 # Protein_GI_number: 15842074 # Func_class: E Amino acid transport and metabolism # Function: Chorismate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 391 1 388 401 439 64.0 1e-123 MLRWQTAGESHGEALVAMIEGLPAGVRVTSDDVVDALARRRLGYGRGARMKFEQDKVRLL TGVRFGETLGSPVAIEIANTEWPKWTEVMSADPLDHDLPREGRNAPLSRPRPGHADLTGM RKYGFDDARPVLERSSARETASRVALGAVAARFLEQAFGIRTVSHVISIGGAGVEDADDV ALPTPDDVEALDVSPVRTLDKAAEERMIARIDEIKSTADTVGGVIEVLAYGVPAGIGTYV ESDRRLDAALASAVMGIQAIKGVEIGDGFLEAVRPGSQAHDEMVPGADGRITRLTNRAGG IEGGMSNGQPIRVRAAMKPIPSIPRALRTVDVTDGEAASAINQRSDTTAVPAASVVAEAM VRLTLARYALDKFGGDSVAETRRNFEQYVASWPEHMR >gi|197324945|gb|DS990229.1| GENE 820 887127 - 888749 1717 540 aa, chain + ## HITS:1 COG:Cgl1583 KEGG:ns NR:ns ## COG: Cgl1583 COG0337 # Protein_GI_number: 19552833 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate synthetase # Organism: Corynebacterium glutamicum # 176 538 9 363 365 311 47.0 3e-84 MPTRPVAVIIGMMGAGKTRVGKEVAQLMSLPFADADVEIEHEVGMRIPEYFERHGEPAFR EVESEVIAGMLHGFGGVFALGGGAPMTPAVQDDLKEYIEDGGKVVYLMADPREAMERAHR GGGRPMLQGDANARWKKLYRQRDPVYYRVANVHVETYGQTPLAAARKMMDMITERTVHVT GATIEDYDVSIGEGAMNHLSEVLGPKPVRIALIHTQPVQRHSDRARTLLRQGGYQVSDIV IPDAEAGKTIEVANGIWQRLGDEGFTRSDAVVGVGGGAATDLAGFVAATWMRGVRYVNCP TSLLAMVDASTGGKTGINTPQGKNLVGSFYTPAGVLADLKTLVSLPNDIFIEGLGEVAKS GFIKDPEILHILEEHAAELRAFDGATFLGSGLENVVAELIERTVRVKAYHVSADLKEAGL REFLNYGHTLAHAIEKLEHFRWRHGNAVAVGCVYAAELGHLLGFIDQDLVDYHRSLLGSL GLPTSWNGGTFDEVLALMHRDKKARGNKLRFVVLDSIGHPVHLDDPPADAVEEAFRRIQA >gi|197324945|gb|DS990229.1| GENE 821 888839 - 889282 684 147 aa, chain + ## HITS:1 COG:DR0778 KEGG:ns NR:ns ## COG: DR0778 COG0757 # Protein_GI_number: 15805804 # Func_class: E Amino acid transport and metabolism # Function: 3-dehydroquinate dehydratase II # Organism: Deinococcus radiodurans # 4 146 2 142 143 145 48.0 2e-35 MTKVIVVNGPNLGRLGVRQPDVYGRQDLETLRTQCSQWGAALGLKVEVRQTDDEAEMVRW MHQAVDEQTPVVMNPAAFTHYSYALADAAHMVGDAGLPLMEVHISNPSARDEFRKRSVIS PVATGTITGMGFYGYKLALDAIAHLIG >gi|197324945|gb|DS990229.1| GENE 822 889368 - 890147 992 259 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0808 NR:ns ## KEGG: BBPR_0808 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 259 17 275 275 327 100.0 4e-88 MNDEANQGYPQGPANGGYPNGASLYGVQGDAHNGNNDYPQYGAASQPGEHQPGYAQPGYP QHDSWQGQGGYAGGQRPPAGGQPVYPPVGAGQRQQPYAGGYPQQGAYQRTPYQPYGQPPK KNNTGKIIAIVVSIVVALALIGVLVWALTSKGGDGKDGKGTETSQTTNGGSNNKNKDGYI EVPRGDSNGNSDDDSYDSINKDYQQKKQELDKKKQELQQELDNYKKKYGGSSSYDNQNSY DSYGDSYDSYGDSYDSTGY >gi|197324945|gb|DS990229.1| GENE 823 890220 - 890942 614 240 aa, chain - ## HITS:1 COG:BH3628 KEGG:ns NR:ns ## COG: BH3628 COG2197 # Protein_GI_number: 15616190 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus halodurans # 25 226 12 226 236 76 26.0 5e-14 MGKNLKAYDEVCDCMGIFDDLTGTIGMVDDDRRSLDSLERLVLEMTPGLRIAWSVIDGPR AVSLTLDARTRPDLVLVDLSMESMSGVMVCRRIRRRDSMVKLLAMTSFAKETFGFDVAQA GAQGLVSKNDEQEILEGLATVLGGGVYGDFGFVDARASFDQLAHETPKRADLVSNREVQV LDLMSRGLTDLSIAKRLGIKAATVRKHAQSSMQKLNAENRVQAVLKWTGHHTEDGMRRQG >gi|197324945|gb|DS990229.1| GENE 824 891134 - 891562 137 142 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0810 NR:ns ## KEGG: BBPR_0810 # Name: not_defined # Def: sortase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 142 101 242 242 249 99.0 3e-65 MQSSPRNETGMTNETGMTVDEAQAYNRRLIDSGQYDLGQPDAEQQNGSGDSGTVIGRILI PTISTDLPIRQSSDTETLRRGAGLLHDTSLPVGGPGTAGCTARRSIPIYGLHADDPGNDD SPRDVHTRNRHGTSKAVTESYQ >gi|197324945|gb|DS990229.1| GENE 825 891907 - 893574 2577 555 aa, chain + ## HITS:1 COG:ML1363 KEGG:ns NR:ns ## COG: ML1363 COG0504 # Protein_GI_number: 15827710 # Func_class: F Nucleotide transport and metabolism # Function: CTP synthase (UTP-ammonia lyase) # Organism: Mycobacterium leprae # 4 552 2 551 590 757 67.0 0 MVRRQHGNSQEHITKHIFVTGGVVSSLGKGLTASSLGRLLRSRGIHVLQQKLDPYINVDP GTMNPFQHGEVYVTEDGAETDLDIGHYERFLDVFLSQKANVTTGQIYQEVLRKERAGEYL GQCVQVIPHITNEIKSRMRAQASDDVDVIITEIGGTVGDIESQPFLEAAREVRRDLGAEN CMFVHVSLVPYISAAHELKTKPTQHSVMMLRQLGISPDALVLRSDRPLNKSIKDKISLMC DVDEEGVVNCVDAPSIYDVPRILFDEGLDAYVVRELGLPFHDVDWDEWADLLERVHHPKH EVNVAIVGKYIDLPDAYLSVTEAIKAGGFANWAKVNVKWVAADKCETEEGAAAALDQVDG IVIPGGFGIRGIDGKIGALKYARENKLPALGLCLGLQSMVIEYSRHVLGIEDANSSEFEP DCSNPVIATMEEQKDIVAGHGDMGHTMRLGSYPAELEEDSLVAQLYGTTHVTERHRHRYE VNVAYKDLLREGGLRISGQSPDGELTEFVELPQDVHPFYVGTQAHPEFKSRPTKPHPLFA GLVKAALDHQEARQA >gi|197324945|gb|DS990229.1| GENE 826 893796 - 895295 2169 499 aa, chain + ## HITS:1 COG:Cgl1527 KEGG:ns NR:ns ## COG: Cgl1527 COG0719 # Protein_GI_number: 19552777 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Corynebacterium glutamicum # 34 499 16 481 481 692 69.0 0 MSDTQQAPNAASDVEMSQYVADRQRVDEEKLKKDDEIIQQFGDYTYGWHDSDAAGEAAKR GIDEQVVRDISADKGEPQWMLDMRLRGFKAFLEKPMPDWGVDLSGFNADDFKYYVKPIDK QAKTWEELPDDIRSTYDRLGIPEAEKSRLVSGVAAQYESEVIYNSIQKDLADQGVIFVDT DTAVREYPDLVKKYFGTVVSPEDNKFGALNTAAWSGGSFVYVPKGVHVDIPLQAYFRINT PAMGQFERTLIIADEGSYVHYVEGCTAPIWSEDSLHAAIVEIIVEKHARVRYTTVQNWSN NVYNLVTQRAYVREGGTMEWVDGNIGSKATMKYPACILAEPYAKAETMSLGFAGKGQYQD TGAKMIHLAPHTSSTIVAKSISRGGGRSAYRGLVKIVDGAEGSSNSTVCDALLVDDFSRS DTYPHVDVREDDVTMAHEATVSKVSEDQLFYLMSRGLEEKEAMGMIVRGFVEPISRELPM EYALELNRLVELQMEGSVG >gi|197324945|gb|DS990229.1| GENE 827 895301 - 896530 1346 409 aa, chain + ## HITS:1 COG:Rv1462 KEGG:ns NR:ns ## COG: Rv1462 COG0719 # Protein_GI_number: 15608600 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, permease component # Organism: Mycobacterium tuberculosis H37Rv # 35 399 23 390 397 285 44.0 9e-77 MASNNTEITIPVADPNDPYAVPAAMPSSADREPRSFDVNDFAVPERKQDDWRYTPLDRIG EFFDVFKPSGETIIAISYADGTAVDEKHVAVSQCALGEGVSGTVSKPSDRAAAVEWNSGR TATVIELSGEIAQPVLVNVIGSGDDLDALHLVISTADEAHADVIVEHHGLARLAEGVEIV TGKNSHVSTTFVQEWEKGSKHVGNQRIHVGEGASLRHSVVTLGGDVVRIRMDQDFGGEQG DLNMLGIYFVDPGEHIEHRTMVVHNHPECKSRVVYKGALDGKDAHSTWVGNALIAPTAPG TDSYELNRNLVLTPGAIADSEPNLEIENGNIIGAGHASSVGRFDDEELFYLQSRGIPETE ARKLVVRGFFGELVEEIGVPFIAEHLMNVIDRRLARGESDAMKAVLEDK >gi|197324945|gb|DS990229.1| GENE 828 896533 - 897321 1378 262 aa, chain + ## HITS:1 COG:Cgl1525 KEGG:ns NR:ns ## COG: Cgl1525 COG0396 # Protein_GI_number: 19552775 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: ABC-type transport system involved in Fe-S cluster assembly, ATPase component # Organism: Corynebacterium glutamicum # 6 251 3 251 252 331 67.0 9e-91 MAEQHTLEIKDLYASVETKEGRKQILKGVNLTVHSGETHAIMGPNGSGKSTLAYTLAGHP KYEVDSGEALLDGVDILKQTPDLRAKEGLFLAMQYPVEVPGVSMTNFLRTAKTEVDGKAP AIRTWTKELGAAMKKLRMDPKFASRSVNEGFSGGEKKRAEVLQLELLKPKFAIMDETDSG LDVDALRIVSEGVNRAKESTGLGILMVTHYTRILKYIKPDIVHVFADGHFVKTGGPELAD ELEETGYDKYLPEGSDSESALA >gi|197324945|gb|DS990229.1| GENE 829 897543 - 898814 1427 423 aa, chain + ## HITS:1 COG:MT1511 KEGG:ns NR:ns ## COG: MT1511 COG0520 # Protein_GI_number: 15840924 # Func_class: E Amino acid transport and metabolism # Function: Selenocysteine lyase # Organism: Mycobacterium tuberculosis CDC1551 # 2 422 8 415 417 381 50.0 1e-105 MVDFTAIRAQFPILDQQIHGHPLVYLDSAATSQKPQCVIDAESEFYRTINAGVHRGAHEL AARSTMAFEDARAKVARLVGANAEEGNEEIVVTAGATAGLNLLATAFGNASLGRGGEAAK RFALKPGDEIVVSKAEHHSVLLPFQELAYRTGATLKWFDLTEDGRIRSDTADEVITEHTK VVAITHVGNTTGAITDIAPIIRRAHEVGAIFILDACQSVPHLKVNFHALDVDFAAWSAHK MYGPTGVGFLYGRRELLEALPPANFGGSMVELAWMDQPAQYMVPPARFEAGTQPVAQVVA AGVAAEWMMNVGLENIEAHERTIAAELLKMGDIDGVRILGPRENVNRIGTVAFDVAGVHP HDVGQFIDAQGIAIRVGHHCAQPVHRHFGLYASNRASSGVYNSVDDAHALVEAVAKVRPF FGL >gi|197324945|gb|DS990229.1| GENE 830 898970 - 899518 746 182 aa, chain + ## HITS:1 COG:ML0597 KEGG:ns NR:ns ## COG: ML0597 COG0822 # Protein_GI_number: 15827243 # Func_class: C Energy production and conversion # Function: NifU homolog involved in Fe-S cluster formation # Organism: Mycobacterium leprae # 11 181 5 149 165 104 37.0 7e-23 MGDFGMSGDDLEQMYQEVILEAARDPHGREHFAADVSKEQGSAPADTTVRASHEYCTPGE SHQFNPTCGDEATVHAEVSDSEPHTIERLVWDGHGCSISQASLSVMVDLCAGKTVDEAME LFRDFHELMESRGAGLQDEAKEEKLEDAVVFQGVSKYPMRIKCALLGWEGMRDSVAKALA AK >gi|197324945|gb|DS990229.1| GENE 831 899597 - 900181 652 194 aa, chain + ## HITS:1 COG:MT1513 KEGG:ns NR:ns ## COG: MT1513 COG2151 # Protein_GI_number: 15840926 # Func_class: R General function prediction only # Function: Predicted metal-sulfur cluster biosynthetic enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 92 186 14 113 115 112 60.0 3e-25 MSDNLVPEPQASVFDSVSKVLGDEEAARRVMANPQLAAGFPNGHPAPKSDGGVEMCACGR HPKSECEDGEHSSEDDIPLKAIDDIGRATAEDVKEALHQVIDPELGIDVIDLGLVYGIEI DELGRAIITMTLTTPACPLTDLIEDECASTLAGLVEEFRIDWTWQPRWTMDKITPEGREQ LAALGFNFDNMPKY >gi|197324945|gb|DS990229.1| GENE 832 900287 - 901534 1839 415 aa, chain - ## HITS:1 COG:Cgl1094 KEGG:ns NR:ns ## COG: Cgl1094 COG0448 # Protein_GI_number: 19552344 # Func_class: G Carbohydrate transport and metabolism # Function: ADP-glucose pyrophosphorylase # Organism: Corynebacterium glutamicum # 3 395 6 392 409 416 57.0 1e-116 MAKNKQKILSIVLAGGEGTRLMPLTRDRAKPAVPFGGVFRLIDFPLSNLVNSDYRHIIVL TQYKSHSLDRHISQMWRFSSLLGNYVSPVPAQQRLGKHWYLGSADAIYQTINIIEDVQPD IVVIVGADHVYRMDFGQMVEQHIESGAEFTVAGIRQPLEESNQFGVINVDPNHPNMIREF QEKPATTEGLPDDPNSFLASMGNYVANTDALFDALAKDEKAADTKHDMGGDIAPYFASRG EAGVYDFNSNVIPGSTPTDHAYWRDVGTIKQFYDAHMDLIAYVPEFNLYNQAWPIYTNSG TLPPAKFVHAGRDRLGHATDSIVSPGVIVSGGEVHHSVLSPNVRIHSWAQVVDSVLFDGV IVNRRARVYKAILDKNVVLTENSTVGIDTEKDLARGFTVTPEGITVVPKGTIVDD >gi|197324945|gb|DS990229.1| GENE 833 901700 - 902578 891 292 aa, chain - ## HITS:1 COG:Rv0881 KEGG:ns NR:ns ## COG: Rv0881 COG0566 # Protein_GI_number: 15608021 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Mycobacterium tuberculosis H37Rv # 10 283 22 275 288 158 36.0 1e-38 MQFITIDSIDDERVAAYTNLTEIQLRNRLEPERGLFIAESPKVIDRALAAGREPISLLVE EPWIEGMSQTFDVVDKRWGTDIPVYVASPEQLRQLTGYRLHRGALSAMRRWPLPSVEETC RDARRVAVMENIVDHTNVGALMRSAAALDVDAVLVTPSCGDPLYRRAARVSMGTVFQIPW TRIGGDDKHFWPRRGLEELRSLGFTTVAMALSDDSISLDELTRRLNNSPESADHIDKLAL IFGTEGDGLSRHTIAGADLTVKIPMSHGVDSLNVAASSAVAFYATSPKRAEQ >gi|197324945|gb|DS990229.1| GENE 834 902889 - 903686 589 265 aa, chain + ## HITS:1 COG:Cgl2237 KEGG:ns NR:ns ## COG: Cgl2237 COG1385 # Protein_GI_number: 19553487 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 257 1 234 241 122 33.0 7e-28 MTDPVFLFDPDTDDVPVNGDGLNAGWTITLPASVKRHALGAMRLAEGDGLSLTDGRGLCV KTTLVDAQAGLVSVERVGRQPQPVTRLVLIQALAKTGHDEAAIDMATQIGVDEVIPWQAN RSIAKWKAGRTDRKWRQVLDAATEQSRRVWSPELAQCVSSKQVVAICRRACVHGDLVIVL HQDATMSWSSVEDEVSRLADRCLADGRPRSINVVVGPEGGISEQEVSDFVGAGAQSVVLG SNILRASTAGPVALSLLSRALGRFA >gi|197324945|gb|DS990229.1| GENE 835 903760 - 904098 582 112 aa, chain + ## HITS:1 COG:aq_141 KEGG:ns NR:ns ## COG: aq_141 COG0537 # Protein_GI_number: 15605719 # Func_class: F Nucleotide transport and metabolism; G Carbohydrate transport and metabolism; R General function prediction only # Function: Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases # Organism: Aquifex aeolicus # 3 110 2 116 121 112 45.0 2e-25 MSKSEDCLFCKIIDGRIPSEKVYEDDTTYAFKDINPKAKVHVLIVPKDHYANVAELAAAD PAELAHIVGLAQGIADKEFSGAYRLVFNTGLDAGQTVFHVHAHVLTGEKLDE >gi|197324945|gb|DS990229.1| GENE 836 904107 - 905192 1102 361 aa, chain + ## HITS:1 COG:BS_phoH KEGG:ns NR:ns ## COG: BS_phoH COG1702 # Protein_GI_number: 16079588 # Func_class: T Signal transduction mechanisms # Function: Phosphate starvation-inducible protein PhoH, predicted ATPase # Organism: Bacillus subtilis # 134 344 108 319 319 272 65.0 9e-73 MTTTTRTITIPSQLDPVAVFGPVDEVIRQVEHAFPDLTIIVRGDRVAIVSHSKSTESQAS RAEDVIHTIIQAAYSAPMDADTVRRLLDQDVLPNKVRAEHPGYGRSAERGRASLGAARSG DARKPRIPGVITFAAGQPVRAKTAGQIAYVNAVDAHTITFAIGPAGTGKTYLAVAKAVRA FQDRRIRRIILTRPAVEAGESLGFLPGTLNDKVDPYLRPLYDALSDMLGPDQLHRYLDDG TIEVAPLAYMRGRTLNDAYVILDEAQNTTEQQMKMFLTRLGFNTTMIITGDVTQVDLAVP RSGLATIEGILGGIDDIAFAHLDAGDVVRHELVGRIVEAYDRHDATRVRRNRGKESREDA R >gi|197324945|gb|DS990229.1| GENE 837 905189 - 905734 710 181 aa, chain + ## HITS:1 COG:Cgl2235 KEGG:ns NR:ns ## COG: Cgl2235 COG0319 # Protein_GI_number: 19553485 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Corynebacterium glutamicum # 1 163 1 169 196 146 47.0 2e-35 MSVEVTNETIWDIDAKAFSDLGLWVMDQMRVSTQSDLTILFVDPDPIAELHERWMSLEGP TDVMSFPMDELRPGDGKTTMEGVLGDLVICPWVAAQQAAAAGHSTMQEMMLLTIHGILHL LGYDHVTPEQERQMFGLQRQLLLTFLAVRRITIEPATLPKGAADALAEYDASHGGGRQIT E >gi|197324945|gb|DS990229.1| GENE 838 905811 - 907229 1618 472 aa, chain + ## HITS:1 COG:Rv2366c KEGG:ns NR:ns ## COG: Rv2366c COG1253 # Protein_GI_number: 15609503 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Mycobacterium tuberculosis H37Rv # 71 456 48 430 435 202 34.0 1e-51 MPLTDTSTIILVVALVVVAALLVWLSLSMAAAESAVGRVTRAGLNNKILEVQTDTETSQF IRMKKIGKIHTVQRLIANRYATSGSCAFFRITCNVFDGVLVACVASLLDAPIWLQLLCGF LFALIVGIVSVLVRPRSAGASKPIDIMLNLAGLVRFATAITPFAKAGEQKGQKRRSKESD LSDDEELEKIQLEQGRATIDRLVEANDFDPEVSEMLRNVLTLSETLTREIMVPRTDMICM DRTATLADMLRLCSRSGFSRVPVIGDDVDDLIGVAYLKDAVRATAFNPAASQRDVASIVR QPMLVPESKPVDDLFHAMQQTRQHVAIVVDEYGGIAGLVTIEDTIEQIVGELEDEHDRTQ HSEPEKIGERKWKMPARTPIATLEEMFEIDIDEDDVDTVYGLLTKLLGRVPIVGSSAVTR GLRLTAVDTAGRRKRVSMIVVEPAAGSQGPAADDDELRSDEQDGESASPQGK >gi|197324945|gb|DS990229.1| GENE 839 907278 - 908288 1469 336 aa, chain + ## HITS:1 COG:MT2433 KEGG:ns NR:ns ## COG: MT2433 COG1159 # Protein_GI_number: 15841876 # Func_class: R General function prediction only # Function: GTPase # Organism: Mycobacterium tuberculosis CDC1551 # 26 336 4 300 300 265 48.0 6e-71 MTKPNAKKRHDTNMTNTDEQESQPAYRSGFIAVVGRPNVGKSTLINALIGKQVAIASSRP ETTRKAIRGILTTDHAQLVLVDTPGIHRPRTLLGQRLNDIVEESLSDIDAIAFLLPADQE IGPGDKRILSRLRTDFATKGEDGTFAWKVPLIAIVTKIDQLGRQQLIDKLIEINEFADFS DIVPVSALEHDNLDEVRQVLIDNTPEGPQMYPDDQVSEERPEDTIAELIRGAFLEELDDE LPHSLAVVVDSIERPEDNESGQSYEGKIQVMVSVYVERDSQKPIIIGRGAEHLVRVKKKL RTPVNRIVGGKAKLDLHVKVAKGWQSDPKQLERLGF >gi|197324945|gb|DS990229.1| GENE 840 908389 - 910425 3032 678 aa, chain - ## HITS:1 COG:MT2242 KEGG:ns NR:ns ## COG: MT2242 COG1022 # Protein_GI_number: 15841677 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium tuberculosis CDC1551 # 101 667 27 594 603 397 40.0 1e-110 MSLFTSVRQQAANITQKALRLGGDFAHPVSDDSSNGPDYAENNALAANGEISLPNTAEWG PGYPTTTLIDSTTGLLTTKTEGNPPLDEGMSIYDIYADRAERMGDEPLYTYKDDSGKWVT STANETLADIRSVAKGLLHYGLKKGDGVAFMCRTSYAWDVTDAAIMACGGVLATIYDTDS AEQIRNIVNNSDARLLIVETADMRDKAEGAIEECPSLETILCIETGGLEEIKAYGAAVSD EELDERIDSIKKTDLCSIVYTSGSTAAPKGVEMTHEHYCTTALNLPVYMPDLLHNKKNSV LLFLPQAHSFARAINYICVASNIRIYIAQGIKTLIADLQVARPSVMIVVPRVLEKVYNAA SQKAGHGPKGVAFAAAVVAAQNYMKELGAKGKVGVLAKTRRAAFDPIVYKTLRDVLGGRA QWIVAGGAPLDPELLAFFRGANVPVYEGYGLTETTAPCAFNPLGVPYHQGSVGIAFPGFE LRVAEDEEIQVKGTAVFPKYHKNEEATEGSFTDDGWYRTGDLGRLDNDGFLYITGRKKDL IITAGGKNVAPGPIEEVIQRCEFVSQVLVLGDKRPFISALVTLDEESLRPWLESKGLNRD MTMEEAASNAAVRAEVQKWVDQANEGVSRAESVRKFIILPEEFSQENGLLTASMKVIRPK VIRRYATLLNTQMYTKKK >gi|197324945|gb|DS990229.1| GENE 841 910645 - 911784 1280 379 aa, chain + ## HITS:1 COG:CC3305 KEGG:ns NR:ns ## COG: CC3305 COG3288 # Protein_GI_number: 16127535 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Caulobacter vibrioides # 10 369 3 364 378 243 46.0 4e-64 MAETQKATVVFGVLNETSQDETRVALTPDIVTRLKKAGVSCLVQSGAGIAAQYTDDDYAK AGAEVVAADDVIARADVLGFVDRPSAETVARLKAGTWVIGMLGSFTDAAYVDALQAAGLV GVAMEKLPRQLSSAQSMDEMTSQNSVMGYKAALVAANAYGSFFPMMTTAAGTIRPAKVLI LGAGIAGLQAIGTARRLGAVVTAYDVRPASRGEVESLGAKFLDLGLDFSKGQGEGGYARQ LSAEEQAAQQTAVDQKAAGFDVIITTAKVPGRKPPRLLTKAGVDGLKRGAVIVDCAASDL GGNVEGSRVGTQVTDGGVTIIGAPYLASEVSNTASNLLARNVGDVLAHFVHDGRLSIDLN EELDDALIVAGRPAAESKE >gi|197324945|gb|DS990229.1| GENE 842 911788 - 912102 508 104 aa, chain + ## HITS:1 COG:Rv0156 KEGG:ns NR:ns ## COG: Rv0156 COG3288 # Protein_GI_number: 15607298 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase alpha subunit # Organism: Mycobacterium tuberculosis H37Rv # 2 102 4 106 110 83 44.0 9e-17 MDIIVAITLFILALLIGVEVIGKVPATLHTPLMSGANSVHGIVIVGVVIVAAHATSLLAW VFIFLAAVLGTMNVVGGYVVTDRMLEMFKSDKSKKSADKNEEAK >gi|197324945|gb|DS990229.1| GENE 843 912102 - 913547 2078 481 aa, chain + ## HITS:1 COG:mlr5184 KEGG:ns NR:ns ## COG: mlr5184 COG1282 # Protein_GI_number: 13474323 # Func_class: C Energy production and conversion # Function: NAD/NADP transhydrogenase beta subunit # Organism: Mesorhizobium loti # 18 476 8 463 465 339 45.0 6e-93 MGTLAEVLSNPLGVVEWFVYLLAAVLFVVGLHMMNSPKTARKGNLISAAGMVMAVAMAFI VLFVTEIGNGFEHLVAVVLLIVGILIGTIVGVWSAKKVKMTDMPQLVSVFNTVGGGAAAL VALNDILTSEELPTLVVLITAGLGIMIGSVTFTGSLIAAGKLQGVKFLRKLTLPAKGVWN IGFIVLTVVSFVMLCVQPEQRLLWCVLTTVFALCYGLVFVIPIGGADMPVVISVLNACTG TAVAMSGLAINNIALIVAGALVGAAGVTLSLAMSKAMNRPLMSVLAGGFGGGASAGGDAD GPEGTMKETSADDVAVQLVYADKVIFVPGFGLAQAQAQRELADLGDLLKGHGVEVSYAIH PVAGRMPGHMNVLLAEANVPYEELIDLDDINPQFPSANVALVVGANDVTNPAARRPGTPV SGMPILDVDKAQNVVVMKRGRGKGYAGIENELYFEPNTQMLFGDAKAGLQSVIAAVKELI S >gi|197324945|gb|DS990229.1| GENE 844 913687 - 914679 916 330 aa, chain - ## HITS:1 COG:L15267 KEGG:ns NR:ns ## COG: L15267 COG1073 # Protein_GI_number: 15673556 # Func_class: R General function prediction only # Function: Hydrolases of the alpha/beta superfamily # Organism: Lactococcus lactis # 21 326 21 317 320 191 35.0 1e-48 MARNTSRIVVGGGIAASVVAGATYGLANLMFSYALDAQAKHSMLRSGRDDGKVADKGPRL DAAEEVEAADWFDQSKQPVVISAEDGIQLHGWLFDPDCAGAKPHLYAICCHGYSGQPQDM AKYAHRFARLGFTVLVPALRGHGLSEGRYAGMGWLDRRDLMRWISLIIDSDADARILLQG KSMGAAAVMMTVGEPDLPRNVVAAVEDCGYASVGQQFIDCARSMFHLPKFLAKPIVTTMG AIARRRAGYGFQEASCVEQLKHATIPMLFIHGGADDFVPPRALDENFDACASIDRQKLLI PSAGHSMSASTAPVVYWKTVTNFVTRVFGL >gi|197324945|gb|DS990229.1| GENE 845 914994 - 915620 1031 208 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224282940|ref|ZP_03646262.1| 50S ribosomal protein L25 [Bifidobacterium bifidum NCIMB 41171] # 1 208 1 208 208 401 100 1e-110 MANTIKIAGDIRDEFGKGAARRMRVAKLIPATLYAGGDQPTFVKLPMKETTLALRHTNAL FSISFGGQTKLAVVKDVQRNPVKRIVEHIDFYEVKAGEKIDVEVPVFVEGTPKGAAVAFV DLQELKVRADVTNLPERIVVNVDGLTDGTKVLLKDVVLPEGAELDMDDPETSVVSVEVPE DTTESAAAAPAADADAAAAAPAADADAK >gi|197324945|gb|DS990229.1| GENE 846 915836 - 916963 1806 375 aa, chain + ## HITS:1 COG:XF1999 KEGG:ns NR:ns ## COG: XF1999 COG0115 # Protein_GI_number: 15838593 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase # Organism: Xylella fastidiosa 9a5c # 19 371 5 357 362 370 50.0 1e-102 MTENNHHDSAALDKLTEPFTVLPNDNPASDAKRQELIDKPAFGQVFSDNMAHMSWTKGEG WGDRRIEPYAPLKLDPGASVLHYAQEVFEGLKAYRHADGSTWLFRPDANAERFQNSAKRL YLPELSVDDFLGSVAALVKRDVNWVPTRREYTLYMRPFMFASEPFLGVRAPHEVDYCVIA SPSGPYFPGGVKPVSIWVEDKWFRTGPGGTGFAKCGGNYAASLLGEYTGIDNGCEQVCFV DAATKTYLEELGGMNMMVVHKDGHVETPSLTGNILPGVTRRSLIQLMQDRGIDVVETMIK LTDLLDDIKSGEVTEVFACGTAAIITPIGRFKSKEFDVTVANGESGKLTVDLRDQLLGIQ LGEVEDPHNWMWKVC >gi|197324945|gb|DS990229.1| GENE 847 917166 - 917438 186 90 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0833 NR:ns ## KEGG: BBPR_0833 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 90 17 106 106 177 100.0 1e-43 MDNKPALNLFESIEPNGTVELEGLGTVNLSHFPYREDLAYGWPDDAVRFHDQALPFDGRK LLYGHTHQLSAAGARPESLNVNSARTAGLR >gi|197324945|gb|DS990229.1| GENE 848 917383 - 918123 619 246 aa, chain + ## HITS:1 COG:no KEGG:BBMN68_671 NR:ns ## KEGG: BBMN68_671 # Name: not_defined # Def: kinase # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 10 224 6 261 480 320 64.0 2e-86 MHGRNRSTSILRGLPGSGKSTWAQNWVSDPANTWPHCVISLDAGWDVVADAQHANPEYAN ELARLATRHGAIWRTEDFDVPLDELLRRNEARPRADHVPEEYIRSSWKRFHHVMFRPLNP ENPNGDLLKRMIADPYVRVTPVRGESDVFACNFTREAFLEGRWNTRTINARGLFVDKNET VVQRGFEKFFAVDETESTKYDTVVAHGDTSPGSFPVRVERKENGIDLTYERQTFKERDIG SRSARS >gi|197324945|gb|DS990229.1| GENE 849 918251 - 918973 917 240 aa, chain + ## HITS:1 COG:RSc2344 KEGG:ns NR:ns ## COG: RSc2344 COG2860 # Protein_GI_number: 17547063 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Ralstonia solanacearum # 4 201 14 206 207 92 35.0 5e-19 MGIEYLAVFCSGLMGGLCAVRKNYDLFAMLITAWLTALGGGIIRDVMLGSLPPVGISDRG FVLTALVSGLAIAVIHPEVDKLRWSMLTIDALAVGLFAVNGTSKALDLGTSGMTAVFMGM FTALGGGLVRDMLLNDVPMIIRDKHLYAVPSAVGCVLTVFVCRGVQWKMLDFTAEVVLDC AIVVLVVVMRLLSVKFSIMLPGAVKRHNTYLPSESRYLKRPVIHPDAHDGGDDDKDQSRA >gi|197324945|gb|DS990229.1| GENE 850 918927 - 919124 131 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPTMAAMTTKTSLGLDAFGPPPPASREPPLAGGGGRLTRKNPREPCGSAGVLCCDDRQTV MLTCC >gi|197324945|gb|DS990229.1| GENE 851 919111 - 919371 407 86 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224282945|ref|ZP_03646267.1| 30S ribosomal protein S20 [Bifidobacterium bifidum NCIMB 41171] # 1 86 1 86 86 161 98 9e-38 MANIKSQKKRVLTNEKAHKRNVAVKSSLKTAIRATREAIAAGDKAAAEAAYKVASQKLDK AAGAGVIHKNQAANRKSGMAVAINNM >gi|197324945|gb|DS990229.1| GENE 852 919580 - 921460 2989 626 aa, chain + ## HITS:1 COG:MT2476 KEGG:ns NR:ns ## COG: MT2476 COG0481 # Protein_GI_number: 15841921 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane GTPase LepA # Organism: Mycobacterium tuberculosis CDC1551 # 10 610 46 649 653 883 71.0 0 MIEPKNKPGFTDQSLIRNFCIIAHIDHGKSTVADRILQLSGIVPEREMRDRFLDRMDIEQ ERGITIKSQAVRVPWTFEGTEYTLGMIDTPGHVDFTYEVSRALAACEGAVLLVDATQGIE AQTLSNLYMAIDHDLAIIPVLNKIDLPSAEPDKHAEEIAGLIGCKPSDVLRVSGKTGEGV ADLLDHIVMEVPAPHGDPKAPARALIFDSVYDSYRGIVTYIRMEDGELKSREKVHMMGIG MTHEPIEIGVISPDMTPTKALGAGEVGYIITGAKDVSQSKVGDTVTSAVRPAAEALPGYR DPQPMVYAGLFPIDNAQFPELRDALDKLKLNDAALIYEPETSVALGFGFRCGFLGLLHME IVSERLEREFGLDLISTAPNVPYEVTAEDNTVHRVTNPSEFPDGKIKKIVEPMVAADIIT PKDFIGSVMDLCQDHRGIMGTMEYISTDRVEMHYRIPLAEIVFDFFDQLKSRTKGYASLD YHEDGEQAADLVKVDILIQGEKVDAFSAIVHRDKAYSYGVMMTKKLRELIPRQQFEIPIQ AAIGSRIIARENIRALRKDVLAKCYGGDITRKRKLLEKQKAGKKRMKMLGHVEVPQEAFI AALSTGEAGNDRDTKDKIRAAQKTEG >gi|197324945|gb|DS990229.1| GENE 853 921475 - 922869 1103 464 aa, chain + ## HITS:1 COG:MT2457 KEGG:ns NR:ns ## COG: MT2457 COG0635 # Protein_GI_number: 15841901 # Func_class: H Coenzyme transport and metabolism # Function: Coproporphyrinogen III oxidase and related Fe-S oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 39 460 21 390 390 259 38.0 7e-69 MPPLAGADSRRLAGGGPANDRLQPATPTTPANAGDAAGYEIYIHVPFCMRRCGYCDFNTY TATDMGAGASRGNYANMVVREMRLVRDWQLVHGIEEPPVSTVFFGGGTPTILPARDLVMM LDAVRGLWGIEPEAEITTEANPDTVDERYIGALAEGGVTRVSFGMQSAVPHVLKTLDRTH TPANVEAGVRAADRAGLRSSVDLIYGAPGESLDDWRDSVRTAVDLGVNHVSAYALTVEPT TKMGRQIAAGTLPKPDDDDEAAKYEIADDLFAAAGLEWYEISNWSRPGYESRHNLGYWRN VDWAGLGPGAHSHYNMVMGSSTDGDAANSDAAGDVSASVTSTSMRGWDIAHPRMWGMAIN DGRVPWSGDETISPTENLEELIMLGLRIREGLDIGRVNRHIEAVNRAQDAAQGTLRIIDD ACLTPLVGDGLITLDPTTGHAVATRRGRLLNDAVIERMFGAVGL >gi|197324945|gb|DS990229.1| GENE 854 922926 - 923066 137 46 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0869 NR:ns ## KEGG: BBIF_0869 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 46 1 46 46 72 95.0 7e-12 MPYFIKRLICFLAGIAIGSFGIALITKSDLGTSPISSIAWVTHSPS >gi|197324945|gb|DS990229.1| GENE 855 923070 - 923384 106 104 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISSIHVGSKFKFWFKRISRLCQRNNLSSILSVLNFSPMDIFSLLTTQKVLARQRSCTVR DRGGTRETAKLSAQGNRESSSLTQQASRRPAFQHYIGQNTRKES >gi|197324945|gb|DS990229.1| GENE 856 923384 - 924952 2079 522 aa, chain + ## HITS:1 COG:SPy1779 KEGG:ns NR:ns ## COG: SPy1779 COG0436 # Protein_GI_number: 15675619 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Streptococcus pyogenes M1 GAS # 119 522 1 404 404 587 65.0 1e-167 MESFATRLRTAMNARHLRQVDIVRAAQASGVKLGKSHISQYVSGKTTPRADTLRFLADTL QVDEQWLLGHDRGRPDMPAQPKRVPDNPGGRADAPRTPSSQAAAPQTTSPSHELEGTPMR HFNKSTKLDNVLYDVRGPVVDEAARMEQSGMHVLKLNIGNPAPFGFRTPDEVVYDMSRQL SDTEGYSASKGLFSARKAIMQYAQLKNLPNVGIEDIYTGNGVSELINLSLSALLDNGDEV LVPSPDYPLWTACVNLAGGTAVHYVCDEESEWYPDIDDMRSKITDRTVAIVLINPNNPTG ALYPKEVLQQIVDLAREHQLMIFSDEIYDRLVMDGLQHVSIASMAPDLFCVTFSGLSKSH MIAGYRIGWMVLSGNKSIAKDYVEGINMLTNMRICSNVPAQSIVQTALGGHQSVNDYIVP GGRLYEQREYIYNALNSIPGVTAVKPKAAFYIFPKLDVKKFNITDDEQFALDLLHDKRIL ITRGGGFNWHEPDHFRVVYLPRIEVLKDATEKLTDFLSCYRQ >gi|197324945|gb|DS990229.1| GENE 857 925149 - 927239 2314 696 aa, chain + ## HITS:1 COG:CAC0854 KEGG:ns NR:ns ## COG: CAC0854 COG0480 # Protein_GI_number: 15894141 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Clostridium acetobutylicum # 8 687 6 640 644 513 38.0 1e-145 MKKHIVAGILAHVDAGKTTLSEALLYRSGQIRRLGRVDHGDAFLDTDAMERARGITIFAE PAIIRSGDLTITLIDTPGHVDFSAETERVLAVLDYAILVVSGADGIQGHTETLWRLLRRY NVPTFIFVNKMDAPGADRAALLAQLRDRFSDGCVDFENGAPTRSMEDIAMLDESAMNEFL DSGAVADKRLKAMISARALFPVFFGSALAMEGIDGFLAGFERYTKEIEPGARFGARVYKV SHDEHGNRLTWLRVTGGEIKAKMVLDGDEKADQVRLYSGAKFTTVDELPAGSICAVTGLT HSRPGQGLGDQCDADAPVLQPVLTYTLLPQGEDPHRCLTALRELDDEDPLLHVVWQERLQ EIHVQLMGAVQLEIIQQIMRDRFNLNVGFGPGSILYKETIAHAVEGIGHFEPLRHYAEAH VLLEPGEPGSGLTFATSCSEDVLARNWQRLILTHFAEKEHLGVLIGVPITDMKLTLLTGR AHEKHTEGGDFRQATYRAIRQGLMTALVEGDFSRHDLFDEDAAEDVAEDAAAADAKTART DESEPSDGSAFASAAARDPGWCRVLEPWYRFRLDIPQDMLGRAMSDIQRMSGTFDPPEMD GQYAVLAGVCPVSEMRDYAMDVNVYTHGTGHLGCVFDGYRPCHNAAEVIEQAGYDPGDDL ENTPDSVFCAHGAGYTVKWYRVPDFMHLDRAYDVGQ >gi|197324945|gb|DS990229.1| GENE 858 927519 - 932090 6614 1523 aa, chain + ## HITS:1 COG:ML0061_2 KEGG:ns NR:ns ## COG: ML0061_2 COG0069 # Protein_GI_number: 15826907 # Func_class: E Amino acid transport and metabolism # Function: Glutamate synthase domain 2 # Organism: Mycobacterium leprae # 391 1192 2 812 812 966 60.0 0 MTFHAPLDLSIHKSQGLYDPSSEHDACGVGMVTTLNKRPERKIIDDAIEVLVNLNHRGAV GAEENTGDGAGILMSMPDEFMRATTGVELPEAGHYAAGIAFLDRDIATSGQQEQAIASIV REEGLEVLAWRVVPTNPDGLGLQALASMPSFKTLVIADAEGKLAGIELDRKTFRIRKRVE HEVGIYFASLSARTITYKGMLTTMQLTPFFPDLSDSRMKAKIAIVHSRFSTNTFPSWPLA QPFRLLAHNGEINTIQGNRNWLSAREGRLSSELLGEFEPLLPITTPGYSDSGTFDECLEL LHLAGRSLPHAISMMLPPAWENNDQLDPDVRAFYEYNNTLIEPWDGPADIIFTDGTQVGA LLDRNGFRPGRWQLTDDGYLVLASEAGVLPEIDDKHIVSKGRLEPGKMFLVDTDEGRIIP DEEIKRNLASQHPYRKWVEGNSVEMSDLPQREHVSHSGQSVQRRQRAFGYTEEDLKMLLT PMANTGKEPLGSMGNDNPLPVLSKRSRMLFDYFHQKFAQVTNPPLDWEREEIVTSLESAI GPEPNLLEDSELHAKKILIPLPVINSDEMAQLKRLDKAKVLGGYYRPFVVKGLYQVAGGG KALGERLEEIFAEVDEAIAGGSNFIVLSDRDSNHTWGPIPSLLLTSAVQHHLLRKHTRTQ ISMAVEAGDVREIHHVALLIAYGAACVNPYLAFESVEDLARTGYLKVDERTAVKNLTKAL SIGVLKIMSKMGVSTIMSYRGAQLFEAVGLSKDIVDKYFTGTVSQVGGIGLDELAEEVAI RHRVAYPNQWTATPHMNLETGGEYKWRRTGEDHLNDPEAIFLLQQSTARGDYQMFKKYSH HINDTSNRIMTLRGLMKFKHDRKPIDISEVEPASEIVKRFSTGAMSYGSISQEAHETLAI AMNTIDARSNSGEGGESDDRIEDPLRYSRIKQIASARFGVTSDYLVHATDLQIKLAQGAK PGEGGHLPGAKVPPWIAKVRHATPGVELISPPPHHDIYSIEDLKQLINDAKMANPKARIH VKLVSEFGVGTIAAGVAKCHADVVLISGYDGGTGAAPLNAIRHAGTPWEIGLSETQQTLI LNGLRSRIVVQCDGELKTGRDVVIAALLGAEEFGFATTALMVEGCVMMRACQKNTCPQGI ATQDPELRARFKGKPEAVINFFMYIAEEVRELLAELGFRTLEEAVGHVECLDQNEAIKRW KSDGIDLSNVLMQPGPVPGTILHQTIEQNHELEKALDNKLIEMAEPALERKEPVRIEMPI RNVNRTLGTMVGYEITRRYGAEGLPDDTIDMTFHGAGGQSIGAFIPRGETIRVYGEVNDY AGKGLSGGRLIVRPEDGVTFDPHENVIAGNVTGFGATSGELFVAGRAGERFGVRNSGATF VVEGVGDHGCEYMTGGTVVVLGSMGRNFGAGFSGGNVYVLDLDMNQVNPTAAKDGSLLFL PLDDEAQALVHDLVKRHVEETGSAFAAGLLKDWKHTVARFTHMVPEHYLAMTAAMAKAEE DNIDFNTPGAWEQVYEQVMEGAH >gi|197324945|gb|DS990229.1| GENE 859 932092 - 933624 1854 510 aa, chain + ## HITS:1 COG:MT3973 KEGG:ns NR:ns ## COG: MT3973 COG0493 # Protein_GI_number: 15843490 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: NADPH-dependent glutamate synthase beta chain and related oxidoreductases # Organism: Mycobacterium tuberculosis CDC1551 # 1 506 1 487 488 494 53.0 1e-139 MGDPRGFLKVRTRRELAERPVEERIKDWLDVHAESGLQPWTTEQAARCMDCGTPFCMTGC PLGNIIPEFNDLVRQEKWEDAYNRLSTTNNFPEVTGRICPALCEKACVLGIHQPPTMIKL DEQTIIDQAWGLDIVKPMPPQRLTDQTVAVVGSGPAGLACAQQLTRAGHTVVVYERDDAI GGLMRYGIPNFKLDKRLIDRRIKQMEAEGTRFRTGVEIGKDISWDDLRDRYDAVVVAIGS TVPRDMKIPGRELKGIHFAMEFLPDATRRVYGVKPVHDITAKDKHVIIIGGGDTGSDCLG TSIRQGAKDVTVLQIMPKEPDERPDNQPWPTFARLYQKTSSMEEGGTYVYSTDSVNFVGS DEEQARVHIEDSTASEGFVADENGHVTGLKVVDVAPGENGPFTRQPGTERVLPADLVLIS VGFLHPDTSTLLDQLPVELDKRGNVARNDKFATSQDGVFVAGDAGRGQSLVVWAISEGRS CAAAVDEYLTGVTELPAPITASQRPMMLPR >gi|197324945|gb|DS990229.1| GENE 860 933972 - 934445 705 157 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0874 NR:ns ## KEGG: BBIF_0874 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 157 1 157 157 284 100.0 9e-76 MPNRAERRKAAKDQRRGVPSQYDQTRGRARSGMLDEYALQEKSRRIQEGVDDSGVWKPSA RTEVDEEVESVFEANPNYQDPKAFKAPHSVRQWFRVGSWTLIALSVIAFFVVMWLPTHPL WLILTVSVVFVVGVLSLFFTAGNYRNNPNLDANGTAV >gi|197324945|gb|DS990229.1| GENE 861 934595 - 935845 1785 416 aa, chain + ## HITS:1 COG:Cgl1093 KEGG:ns NR:ns ## COG: Cgl1093 COG0438 # Protein_GI_number: 19552343 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Corynebacterium glutamicum # 6 411 1 385 385 369 49.0 1e-102 MKVDILTREYPPYVYGGAGVHAEELSKVLAERVDVTVRAFDGPRTEADAPAIPGDGSTKG SLKVVGYGTPSELADANPALKTFGVDLQIANDVDADIAHAHTWYACLAGYLAKMLHGTPL VITAHSLEPFRPWKREQLGGGYNLSSWAEKDAYEHADRVIAVSGGMREDILAAYPNLDPD KVVVVHNGITMSDFATPADDDPGWAVFDRYHIDRSKPTLLFVGRITRQKGLPYLLKALHL ISKDIQVVLCAGAPDTPEIAEEVKTAFAKLDEERGNIIWIEEMLPRPELNALEHGCDAFI CPSIYEPLGIVNLEAMACGLPVVASATGGIPEVVVDGETGYLVPIDQLRDGTGTPTDPDK FVHDMAAAIDKIMADPELAKKMGQAGYERARDHFSWESIADKTVAVYQSVLDEQNK >gi|197324945|gb|DS990229.1| GENE 862 935997 - 936863 219 288 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|225088774|ref|YP_002660041.1| ribosomal protein S16 [gamma proteobacterium NOR5-3] # 1 238 1 229 312 89 29 6e-16 MPTTDTADNEVLKLDNVEFRRNRRVIITDVNLIIHAGERWVLFGPNGIGKSTAVGMLATR TFPSDGRVFILGHQLGKYDVFKLRTRIGLASADLGRQFPEFEDPLDAVVTGLSAVTGRWR DTYTDEEYARARQLLRDFRVSYLEGKEMWRLSEGERTRVLIARALMGDPELLIMDEPTTG LDLGGREQVMRTLSRIGEEDSRRAVVLVTHRLEEIPAGFDHIAIMGRKPVSAEDATNDGI DAMGNPSAGTIVYTGPLEAGLTDERLSELFGMPIEVQHTHGRWSAFAV >gi|197324945|gb|DS990229.1| GENE 863 936934 - 937824 574 296 aa, chain + ## HITS:1 COG:ECs0664 KEGG:ns NR:ns ## COG: ECs0664 COG0388 # Protein_GI_number: 15829918 # Func_class: R General function prediction only # Function: Predicted amidohydrolase # Organism: Escherichia coli O157:H7 # 9 294 3 261 262 211 42.0 1e-54 MNGTQELKVAVAQFTVRREPEWNLDIIDGYAWQAADAGARLLVLPEGLIARDGDDDMFAA AHAQPLDGPFATGLRRISEERHITLMGTVHAVPGAADAVPDKPASCATDSRVSNVFVVIH DGALIATYRKLHLYDAFAARESDTVRSGTELPPIVEIDGWHVGVMTCYDVRFPEVARSLA VRGADVIIVSAAWVRGRLKERHWKLMTAARALENTCYVLACSEVSARNIGCSRAIDPLGE VIAQAGDGQGWLCGQGEAGGQAGMLIARLHREVLESARRTLPVLENRRFADPQLRD >gi|197324945|gb|DS990229.1| GENE 864 937730 - 938557 552 275 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0878 NR:ns ## KEGG: BBIF_0878 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 65 275 1 211 211 406 97.0 1e-112 MPGCTEKFSNPRDARCRFWRTDASQTRNCGIDTNFPYDAHAARESATRVARHARIALHEC QSAPLYFSDPLTIVLSNPGVSRLSEAQIARISPVGIGHANEAEAGVPYYDDTFDEDDECT TADISDPDGSIALGLSGMYYEEGMHYTAASERQKRVDCFRAAEILYRHAAGRGNAIGRLC LGYVYAYDRCEGRYFRSYYNNFGEVPPKPDTDVLAYECFRHAAEAGIAEGCYKLGDVLAE GRGCAADHAKALDMFLREYMCDGYCGRHILHEIHD >gi|197324945|gb|DS990229.1| GENE 865 938691 - 939641 1248 316 aa, chain + ## HITS:1 COG:BMEI0543 KEGG:ns NR:ns ## COG: BMEI0543 COG3049 # Protein_GI_number: 17986826 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Penicillin V acylase and related amidases # Organism: Brucella melitensis # 2 314 37 353 367 157 31.0 2e-38 MCTGVRFSDDEGNMYFGRNLDWSFSYGETILVTPRGYQYDYVYGAEGKSEPNAVIGVGVV MTDRPMYFDCANEHGLAIAGLNFPGYASFAHEPVEGTENVATFEFPLWVARNFDSVDEVE EALKNVTLVSQVVPGQQESLLHWFIGDGTRSIVVEQMADGMHVHHDDVDVLTNQPTFDFH MENLRNYMCVSNEMAEPTTWGKAELSAWGAGVSMHGIPGDVSSPSRFVRVAYTNTHYPQQ NNEAANVSRLFHTLVSVQMVDGMSKMGNGQFERTLFTSGYSGKTNTYYMNTYEDPAIRSF AMSDFDMDSSELITAD >gi|197324945|gb|DS990229.1| GENE 866 939991 - 940728 574 245 aa, chain + ## HITS:1 COG:no KEGG:Maqu_0555 NR:ns ## KEGG: Maqu_0555 # Name: not_defined # Def: hypothetical protein # Organism: M.aquaeolei # Pathway: not_defined # 10 245 2 199 204 121 35.0 3e-26 MAGSYGAETTQGERYRLSFTVGGLLAPQGRALAEMYLNRMGDGSTERSSQAKVSEKISEK ANEKSDKNAGEEVGESIAAIRQQAIEENVLAIRTDSANRRVVAETTRRLSALTVGELAYL AGPYSSISDREALMWIAMCRYYAIVGEFAGEVLKKHYLTGNTHLDFEDYDRFITDKATWH PELENISEGTAKKLRSNLFKAMREAHLFDNNSDTVLSFLPSPSLADILRKRADSFGYLPM RESSL >gi|197324945|gb|DS990229.1| GENE 867 940746 - 941453 394 235 aa, chain + ## HITS:1 COG:no KEGG:RER_28970 NR:ns ## KEGG: RER_28970 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 23 228 12 196 199 131 35.0 2e-29 MADSIAGIGFVDERRDIDADFAHLYEIMESRSFRTNSGLAGEQPYYIYDYPPMQELEVAE HIKQLANRLQTMTPKDDGDYAPQVLTLDLYDIALEILEKRGILDRIFKREEKRHKKVSSD VHTDNFLRLLDNILGADANHLPDTIRDHYEQTKSEGGADIVFITGIGKVYPYIRAHTLLN ALQGRIDDRPLVLFYPGTFTRSATSGSVMSLFNCLPGDNYYRAQNLREMSVQLEA >gi|197324945|gb|DS990229.1| GENE 868 941537 - 945193 3240 1218 aa, chain + ## HITS:1 COG:no KEGG:RER_28960 NR:ns ## KEGG: RER_28960 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 7 1218 1 1168 1168 763 38.0 0 MNGESGISFKELFNKDIDRNINGVIKANDEKNLNDEVNEYVLTEEICRNLAKFLDAYNDP SNHEQNGAWISGFFGSGKSHLLKMLSHILGEVPAELVDKGNKPTMSREQIVHAFMGKAEA QDDQMLAGQLEKALTIPATSILFNIDQKADKSNASDMLLYAFVRVFDEARGFYGKNPYVA KFERDLASNGYFEDFKQEFEQVAGKPWSEGRGEAVLWDDEICEAYAAVTGKPEQDSIIQR YEDTYTMTVGDFADDVNVWLSRQEPNRRILFLVDEVGQFIGENRELMLSLQSIAEDLAVK TNGRAWVVVTSQEDMDTIVGDRTKQQSYDFSKIQGRFSIKLKLNSADVVEVIQKRLLTKK PEYESVMNELWNEQNANLRTMFEFTRETSKFSNNKAYSKDDFIASYPFVNYEFELFQNVL REMSRYNMFSGRHASVGERSMLSTISSTLRSSQNEMVGALMPFDKLYDGIADAIQSTSNF RINQAEKRLGSDIKELGVRLLKVLLLVKHVDGFPTTPHNLRILLTDQFDMDVMELERNIK YVLGELEKDTYVQRVGDTYNYLTNEEQDIEQEIKSTDIDSTKEIEELKKILVSDVLGKMT VAYGEQRAQFRYGLRIDGVQQSAQQPIWLNVVTSINAQDRADAIRMGMGMRDTITLLLDM SDRTLFDDLRMYVKTYTYLMRTDKNSQSEVRQQIISRKSVANERLYAELRTRIVKAAANG EFNYNGGTVEVKSTEVRARMAEGLGTLIGRYYTNFSLLGGQRYEETDLARIIMNASQHQP GMLDGMNAVQDKLDVPADDVFAAVSRDKGKGIIATVKSLLDAYGSVPYGWPYAATLACIG HLYGSDRITLTLDGKPVQRSEAARLLRETKKQDSIRVDLPRVFDTRKVSQLRDFARDFLG LTAADLPSNAIDLAETVTTRLKREAESLTQLRVRNARFGFVQQLDKAIEKINYASGMSED WLLGDFTAQETENGSEELLEFKEDVIDPIVAFLNGSQSRILADGLEWLKNNKPNIDYAFG TTASLYQSAEQLANDPNIFRKTNKFKTTIDDLREETDAAIRTERANALKDVEGIRAKIHD SAEYQHAAQAAQAEAETELDQVAERMQNMLFIYKMRESVHELSERTYPQLINALAASASR PKTALAGEAQAATATTPMDANIPESQQKETPRVAVSFATISRPHTKDALETEDDVDDFLD AYRRELIAAIENGKKILL >gi|197324945|gb|DS990229.1| GENE 869 945190 - 948777 1899 1195 aa, chain + ## HITS:1 COG:MA2372 KEGG:ns NR:ns ## COG: MA2372 COG1002 # Protein_GI_number: 20091204 # Func_class: V Defense mechanisms # Function: Type II restriction enzyme, methylase subunits # Organism: Methanosarcina acetivorans str.C2A # 57 1162 69 1151 1161 822 41.0 0 MNTSKLQAFATDARRQLMNAVRARLDAALVPNSDAQVDDPRAFDFLQREIERAGDGEEGR RHVVERYAYRWFNRIVAFRYMDVHGFTGTPVVSPAGLTSTNGLPEVLAAAKRGEYDSRVF SAHVNDKAKERIEGLLSGSILADDPQGVAYGLLLQSECRFWNRNLPFVFENVGKEAGRVD ELLMPADLLAEGSVLRNAVEVMTPEDCGVDDPSGNVEIIGWLYQYYISERKNEVMDGFKK NHKAGAEEIPAATQLFTPDWIVRYLVQNTVGRLWMQSHPDSQLYKNWDYYIQPSEDGSTE NEDILNIQTPEELTVCDPACGSGHMLTYAFDLLYEIYEEEGYAPSDIPGLILKHNLYGME IDERAASLAAFALTMKARSRSRRFFKKQVEPNIQRIVPISFEESDVVDLNDLYQVDLDFT VWNTYAKADVYGSLIEPPQELVDLAASAEDAEAETTLFDSLLRERVEGVFAQTRYLARKY AAVVANPPYMGAKNMSGELKQFVQDRYEDGKADLFAAFIYRLLGMVPEHGQLGFMTPYVW MFISSYEQMRQHIIRQEHISSLIQLEYSGFEGATVPICTFTLEKGHSDRKSAFVRLSDFV GAKQQGPRALGIIDAHNNEQSAHSGMRKYFFEVNQHEFAQIPGSPIVYWLGEQLRKTLIN PASDTILFSDGLIKTGDNLQYLRLWWELISTNVNNKSRYRFCAKGGKERNYYGNLNNVVK WDEETRDYYRSDKVARISPKYLWDKEGITWTKISSRGGTFRLLRKEDIAETGGPSLFLKD NVDGNDLLSFIGVITSSLAPYILQGLNPTLNYQTGDVLRFPLPIKKEEALPSLVHSMIGS SKEDWDSFETSWDFQRFALLDPNQGSQAGDLLEDAVTHLREYWNRVSEEQRQREIRNNEL VADAYGVRDDVPCDVPLERVSLKRNVAFAYPKDTPEARNEKFAQDVVRELISYAVGCMFG RYSLNKPGLILASQGETLDDFHAQIPNPSFEPDVDNVIPVTETDCFEDDIVTRFRRFLSV VFGKENLAANIAYIEQVLGKSIRKYFVNDFYNDHVKMYSNRPIYWQYSSQTNNKGSFKAL VYLHRYTPKTTNVVLNYLRDYTGKIADIADGLERSDRTADKKQAAKLRKVVLECKDYEDQ TLYPLATRNLEIDLDDGVLVNYLRMGKALRSIPAIEKKRKEVSTWTWPVHPLGKE >gi|197324945|gb|DS990229.1| GENE 870 948917 - 949057 92 46 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282963|ref|ZP_03646285.1| ## NR: gi|224282963|ref|ZP_03646285.1| hypothetical protein BbifN4_03960 [Bifidobacterium bifidum NCIMB 41171] # 1 46 1 46 46 71 100.0 2e-11 MNIITTHEIFSSLVSIKIIRQHPDKTIQLLTIMRERLICLFSKLCG >gi|197324945|gb|DS990229.1| GENE 871 949343 - 949537 182 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPISSRIGNWNNSIMLPFIISSVHILLREENVPRSGVGRNAQCKISHNDIAKAVANEYNR VCLK >gi|197324945|gb|DS990229.1| GENE 872 950381 - 950575 65 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFENPSDFTVRIPIRKSNSIDRQTFEKCRSAVPPPIYQTILLIFMTMRIITKNVDKHRLQ IRHI >gi|197324945|gb|DS990229.1| GENE 873 950669 - 950860 293 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282964|ref|ZP_03646286.1| ## NR: gi|224282964|ref|ZP_03646286.1| hypothetical protein BbifN4_03965 [Bifidobacterium bifidum NCIMB 41171] # 1 63 85 147 147 98 100.0 1e-19 MLSRQKIIFPSKLILPLLSLRPIPHSTIHMLKKPLKNIKLLIKRRSFIRICFLEGIKFIP QIF >gi|197324945|gb|DS990229.1| GENE 874 951665 - 952369 680 234 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140121|ref|ZP_07802314.1| ## NR: gi|313140121|ref|ZP_07802314.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 234 960 1193 1193 489 100.0 1e-137 MLPNPILNIRLIDIAFYESCLDEFKYLSHLDDYKKQSFLLQVFWIVTYAGLEDKRRAKLL SKVVTAGNGIYAPLFMDRIVWAFKFRLDSKSKNMVWDLWLHRFIEDRHAGKGRNWSEKER IAFAELIPLLDEHLKEGMKYLSNNFPRIMGRDFINLIMLKNIDDIPQECAEAFIEFYTCL FKQPDIPYVWRVEELLQNLIDKFGIGKVSPLVSLARQKRIISDTWSPSFKGGAA >gi|197324945|gb|DS990229.1| GENE 875 952391 - 953917 1066 508 aa, chain + ## HITS:1 COG:MA2369 KEGG:ns NR:ns ## COG: MA2369 COG2865 # Protein_GI_number: 20091201 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 4 396 7 394 510 187 33.0 5e-47 MGIKTLLRGESKNVEYKLTPPSRSINYTKTAVAFANGQGGCLVFGVEDQTLRVVGIAEDK VFTVMDSISDAIVNSCEPMIIPDITMHDVNGKTVIVAEIAPGLQRPYHIKSLGQEQGTFV RVAGTTRQADQSTIRELTIEGSSRSFDQVQCLGLSITEEDIEALCASLTKTAKDNAEDPA KVKMVTEKQLLQWGVLVEQDGRLVPTNVYAILTGNEAVRSVVQCGVFKGTTKAVFVDRRE FVGTPQELIEESYQYVLRNIHMGARFKGVYRQDVYEIPPDAVRELIVNAIVHRSYIDHSS IQIAIYDNRLEITSPGRLPMGQTIERMKQGYSKIRNEALASAFEYMGYIEHWGSGILRVM QEVRDAGLPEPEFLGGDTDLRINIYRNGSETGIVTGLRRDSLSDDGIVTGLRRDSLSDDG IAEETTSKTNAAPNAAIAVVPSQKERILDALRKNASISISDAIRILGVQERQAQRILKSL IEEGSAVKIGAARATRYAEAKKRTEPYE >gi|197324945|gb|DS990229.1| GENE 876 953910 - 956555 1709 881 aa, chain + ## HITS:1 COG:no KEGG:RER_28940 NR:ns ## KEGG: RER_28940 # Name: not_defined # Def: hypothetical protein # Organism: R.erythropolis # Pathway: not_defined # 1 875 1 828 831 503 36.0 1e-140 MSEDSQVTRLLARRFSQPGERGRIVFWRDDKKQYADVVATLVGEHVTDEALREVELITPE IGDENDRRYIPFTVRYRMFHEQPNQKFLVYLTEPAPAVQDNWLLDLELAYGPTFTMDKLA VTLTETLPEASADTRNVWLEVMKRVPKFFDSEERAKRFAKRLNAHDDATDFQAKMIATLL QLKDDRHSMQDIWAELLTQYSQGDDSGITVIERMGLSTFHWTGTRRIYRFDVDADAGSEP TVKDFVLWLFQLAWNGFSDGRNAVSAYANIIRDWDDWYKNIDMRTVLQNLSENAVEELHL STRIADMSVEELVDRDLFRDVDEMIVNKLFERLGSQSITDDQVQRIINGRKQKLWYAEYA DQYECIAAASRLRAVLTECGELISTISSPEQGMKLYAEKLYKADGAYRKYVLAWHRANPD AVSVDDDLQSAYEAYQQDLGQAWQKQVDTLSQWKFIDMDAQTNFYEREIAPVLKSGRKIA VIISDALRYEVAQELSERIDRESRFSTKLNMQYSVLPSYTQLGMAALLPHDSLEFDSKDR LYVLADGRSTKGIEARDAILSAVGGKAIRYDDLTKLKVSEIKELYKSCNVLYVYHNHIDA TGDTEKTELETVDACEKTFKELGEVVKKLASGNVHNMIITADHGFLYQDRDLDGTEWLSE QPKGDTVWVRKRRFSIGANLAPGRAFVTFNAAQIGMDDPRNEGTSIQVPNSIMRLRMQGA GVKYVHGGAALQEIVVPVLHVSKGRSAADDVRAVEFTILQRTDRLSSRQLTVEFFQNEPV GGKIRARTILAGLWGRDTAGNNVLISNETPVAFDLLGQEKSERHVTATLMLTSDAERFNG TNIELRLREKTDGSNVLVMLDQKARYFFKQGVVADDAGFFD >gi|197324945|gb|DS990229.1| GENE 877 956598 - 958805 1770 735 aa, chain + ## HITS:1 COG:STM4491 KEGG:ns NR:ns ## COG: STM4491 COG4930 # Protein_GI_number: 16767735 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent Lon-type protease # Organism: Salmonella typhimurium LT2 # 27 505 24 494 694 430 44.0 1e-120 MNEQGMSQNGWIESPEHNADGNSLTALDVKITDLFPGVTVRKDLVNKVKGNALVPSYVLE FLLSAYATNTDQASIESGVDRVRAILANNYVHREEANLIQSKIREKGSHRIIDRVQVALN EKTDLYEATFSNLGISQVIVDPSLVKAYPKLLVTGIWCMCQIGYAYSGDPREVPWQLLQL KPVQMSRDDRENYMQQRSQFTDGEWIDLLMQSIGFNSDLFSDRAKLLHLVRMVPFVERNY NLVELGPKGTGKSHIYSEFSPHGMLISGGEVTVAKLFVNNSNGHLGLVGYWDTVAFDEFA GKAKKAGRDLVDIMKNYMANKSFSRGVETFQGEASMAFVGNTSHNVPYMLKNSDLFEELP KQYHDPAFLDRIHFYLPGWEFEQIRSEMFTSGFGFVVDYLAEILHNLRDADYSDRFEKYF ELSSTLSTRDKDGIKKTFSGLMKLIYPDGKATPEQMEPLLRCAIEGRKRVKDQLCRIDST MEEVEFTYKRVSDGEIVAVQTLEELDYPQLYWRGRVVENSEDESEAESFVAGDDVAIAGS EGEAGASENANALPVARQQETAAMTPVERLAAKADGKQWELVENQRGITYYKLFGPYLAG AKKIVVEDAYVRKPYQLRNLAEFLEMLLRCKNSDEDVAVHLVTGHNDPEFVEAQLNGLNE LASTFSQLGVNLTYEFRDTLHDRSITSDTGWEILPGRGLDIFQKIVDGDWLNPLLRHQQL RRVKECKVTYRRIER >gi|197324945|gb|DS990229.1| GENE 878 959413 - 959688 205 91 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVNDAIDTVTRKTEMAVSLSSTALRANPTRKIPTTEKAMARMSYTSVATVLFLAYFPYES AMTHPLILLDLFWTCSSNISAERLISLIFFK >gi|197324945|gb|DS990229.1| GENE 879 959991 - 960134 146 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MADTLISNTVIYSYTHSFCAMLCMNKKVKNEIDESSRIFLISNDEYY >gi|197324945|gb|DS990229.1| GENE 880 960150 - 961127 530 325 aa, chain - ## HITS:1 COG:STM4490 KEGG:ns NR:ns ## COG: STM4490 COG4127 # Protein_GI_number: 16767734 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Salmonella typhimurium LT2 # 1 325 1 329 329 234 40.0 2e-61 MIRAGHGGVYAEDWLDKGKIGIGWDFGSKDIASMKREQIRATYLAEHPNESKNRVAAIVG QVYRFAHEMTQGQTVVMYDPASRLYHIGVITGDCVPTRDEDDPAYTRTVRWDTSASRDAL KQSSKNSLGGIQTIFAVSDEVMNDLRSATGTLQPIPEEAAVEDASDDNEDARAATYDNGI ELIKDRVNQLDWEDMERLVAGLLKAMGYCARITPKGPDGGRDVIASPDALGLESPRIVVE VKHRKGAMGAPAIRSFIGGLRTNDRGLYVSTGGFTREARYEADRSNVPMRLLDLDGFVRH YVDVYDKTDEETRDILPLTRIWWPA >gi|197324945|gb|DS990229.1| GENE 881 961063 - 961272 161 69 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPIFPLSSQSSAYTPPCPARIIQALIAAPPFCHWFHLIACSEMQLQAPDVHVLIGCGPHR ILAPLCLDE >gi|197324945|gb|DS990229.1| GENE 882 961360 - 961557 355 65 aa, chain + ## HITS:1 COG:no KEGG:BLJ_0940 NR:ns ## KEGG: BLJ_0940 # Name: not_defined # Def: phage protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 65 1 65 65 100 96.0 1e-20 MKYGMRKPSWKKSLSARTKGLAARAVKRALIPGYGKKGMGWLHPKRKLYNTVYKKTTFSL FDLFK >gi|197324945|gb|DS990229.1| GENE 883 961581 - 961751 63 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCSNPDTYEFRLSLDLPQQSAVPTDTFSALREIHEYSAENGPRSHTAAEMFDSLGI >gi|197324945|gb|DS990229.1| GENE 884 961819 - 962328 632 169 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0884 NR:ns ## KEGG: BBIF_0884 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 168 4 171 172 318 97.0 5e-86 MLYIYLVVNGQALQTSIAYLTTPLLNVALGVGMFTAQSPTFPWMAIVLAASFSVYGLLKR YVPLDAIAQAENDKDMRQWEPLNSMLLISSTLAFARYDDKRMWAYDVIENAMTRNLGYSF SEEYDESAEDNEDTNEVGGQPGPRLNYGPTYYAAFVHDPEGNNIEAMLV >gi|197324945|gb|DS990229.1| GENE 885 962400 - 962678 299 92 aa, chain - ## HITS:1 COG:no KEGG:BLJ_0942 NR:ns ## KEGG: BLJ_0942 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 92 1 92 92 147 96.0 2e-34 MPCEHTHGSDTSGTMVAGMTSARAVEQTRMGIAAPLVSNIGWGVLPLYWHALSGMNAISV LAYRLIATLAVMIALLMASRRYRAYHRAIAAL >gi|197324945|gb|DS990229.1| GENE 886 962742 - 963662 987 306 aa, chain - ## HITS:1 COG:DR0133 KEGG:ns NR:ns ## COG: DR0133 COG0657 # Protein_GI_number: 15805172 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Deinococcus radiodurans # 42 303 43 287 296 92 32.0 1e-18 MPNITPSEDRTVETVHVPNNPTLTGLARLTRNVAYRTGADDLVMDIIAPQSTGDDDDRRY PTVVFVQGSAWTTPDRDYEIPQLSELAREGFVVATVNHRNASRDASAVFPAYLKDVKAAI RYLRANARRWHVDPERLGIWGTSSGGNTSLLVGLTADDPRYEDGSYATESDAVSFVVSCF PPTDMMEAIDAFGNEDDPFRLYYFGPFAAVVGATHETGLSDDVRRRAADMSPYLQVRDGV AYPPTMLLHGTADTVVPYRQSVKMHKRLLEHGVDSRLVLVDGAEHEHDFWSPQVFDMIFD FIRERC >gi|197324945|gb|DS990229.1| GENE 887 963903 - 965003 1459 366 aa, chain + ## HITS:1 COG:MT2178 KEGG:ns NR:ns ## COG: MT2178 COG2519 # Protein_GI_number: 15841610 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA(1-methyladenosine) methyltransferase and related methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 6 297 5 267 280 228 44.0 2e-59 MNPRRGPIVAGEKIQFTDRKGKKITDQLTAGGVTQTEHGIILHDDVIGRTEGVVVTTVTA KREAQVNADHPERDRNKPWKATRAIGGWQYAVMRPRLADYVLSMPRGAQIMYPKDIAQVI QLGDIRSGLNVLESGAGSGAMSVNLLDAVGESGHLTTIELRPEFARVADANATLYYGERP RWWDLKTGDFDSVAAGLPEHSFDRIVLDMLDPWNRLEQAYRVIAPGGVLIAYITTTTQMS RLVEALREAGHWTDPAIQETLERTWKAQGLAVRPDHAMIGHTGFLVVSRAMAEGFAALRK RDRATKDTTTDIDSLTPEQREAQLDDLELRDISDHKLRKVLRDLDLQTSRLSQDDQACEQ GEATAI >gi|197324945|gb|DS990229.1| GENE 888 965123 - 965680 835 185 aa, chain + ## HITS:1 COG:mll7959 KEGG:ns NR:ns ## COG: mll7959 COG2062 # Protein_GI_number: 13476591 # Func_class: T Signal transduction mechanisms # Function: Phosphohistidine phosphatase SixA # Organism: Mesorhizobium loti # 19 184 6 170 171 75 31.0 7e-14 MGVNLSKVEKKAKNYSHVLLVMRHAKAEPFNDKGDHDREITDKGEKQAKIVAKGLVGMKL LPDRVACSGAVRARQTLERMLKVFGDHPKVEYRQALYDGGMQSVFDELANAKDKTRVLMV LGHEPTVSVSCQWLASSDSDMVKLDLLNLGMSTASVVVFGSDQPFSRWQVHDAELLAVLS PKDFD >gi|197324945|gb|DS990229.1| GENE 889 965936 - 967156 1232 406 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0871 NR:ns ## KEGG: BBPR_0871 # Name: not_defined # Def: integrase/recombinase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 406 1 406 406 778 98.0 0 MAGKTKNRRTGGSGSVFQDSKGRWHFRKDMGTDPATGRRRPPIEATGMVKSEARARFQAK IAEWERDGRLPSKDGPKTADYFERWMEEHRAAINPTTWRNESSWMRTMNAIIGDIRLNRL TANDINGMCRRLRRTRKSKTVNTYLAVLGAMLRTAKRDGLIADDPMENVGRMPEDRYERP ILDVADPAKVIEAALAEPDPAVAVFDSPDEREKWALMFELAFTTGMRPGERYGLMPYQLE LHHGIPVINVCQQAKPIPAGATIPDWMEAEHLDGAIWLTKPKTAKGVRTVPIPQGLWDRL WAHIVKWGVPSHGLVFTNLYGHPIRRDNEEKRWRRALKMAGLPYVDIYSARHWLATELAA AGASDEERTAIMGHTDIHTTSVYTHWRERRLAETLDAALPDLRDGQ >gi|197324945|gb|DS990229.1| GENE 890 967347 - 967610 65 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLGRDLVRCSLSFDLRVERFLGHGDDPVRGSWLDPLVACEFIDGRQWGGTPLKGYLLDA FSRSIDSRRVRPTLFHAAIWSSVADFT >gi|197324945|gb|DS990229.1| GENE 891 967539 - 967793 262 84 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140133|ref|ZP_07802326.1| ## NR: gi|313140133|ref|ZP_07802326.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 84 99 182 182 150 100.0 3e-35 MAEKSLDAEIEAQRTSNEVAAKDHKAQNICMIIATTAYSILPIIGFGSAIVCVALGQSVA AAFGALIGAVTAGPQIIQEIRKKR >gi|197324945|gb|DS990229.1| GENE 892 967843 - 968049 251 68 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0874 NR:ns ## KEGG: BBPR_0874 # Name: not_defined # Def: GP28 phagic protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 68 1 68 68 99 100.0 5e-20 MGIEYMSVTDVAKRLGISTAAASAYKLPQPDATIGRTRGWLPETIDRWNASRPGRGVGGG RPRKNKNE >gi|197324945|gb|DS990229.1| GENE 893 968051 - 968206 143 51 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224282980|ref|ZP_03646302.1| ## NR: gi|224282980|ref|ZP_03646302.1| hypothetical protein BbifN4_04045 [Bifidobacterium bifidum NCIMB 41171] # 1 51 1 51 51 68 100.0 2e-10 MPWDIMKTESIVSAVFALGTAASAWFGWPFALTAGCAAVSAVFALIAGRKG >gi|197324945|gb|DS990229.1| GENE 894 968255 - 968374 102 39 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTPSEIITSISLLVASIAALIKAVTGLVKEMRRKPKRKK >gi|197324945|gb|DS990229.1| GENE 895 968449 - 968556 88 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVVDRVSDDSHVFLFSRFIFNILLFENVGKSREIT >gi|197324945|gb|DS990229.1| GENE 896 968501 - 969418 1053 305 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0877 NR:ns ## KEGG: BBPR_0877 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 305 1 305 305 583 99.0 1e-165 MNLLKRKTCESSETRSTTMEVYFSGPSVDEHSMSVRDLAPALIGLADAIDRYKELSCPFA DLDVRITATKAGSFDVILQILGTVVSLGQGAEAADVVNLASGIMDVLKILLTRYEQTGTV KPGEHEVVERHETRVALRIGKTAKLNVSRKSYRASCDGKIINDLGTATKPASEDGYNPVR FIHKDSGSDAAIPGDVSESMSVLTLSDQPIEPSVETTTLQIDTIQFQSRKWKFSKGDEKF WCEIADEAFLARLNRHEVSFCSGDLLKVKLETEQYVRDGRLETGSRRITKVIEHIPIERQ QTLDI >gi|197324945|gb|DS990229.1| GENE 897 969465 - 969827 400 120 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0878 NR:ns ## KEGG: BBPR_0878 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 120 16 135 135 216 93.0 3e-55 MGLTIASYRLPRDICGLYDDRHGLILLADWLNQRQRRCTLCHELIHARHHDPGCGSQYGI KCERRCHRETALALISPVDYGMAEEIYDGNTWMMAVELGVTIQVLEDYRQLLYDSGVCVQ >gi|197324945|gb|DS990229.1| GENE 898 970033 - 970551 257 172 aa, chain - ## HITS:1 COG:no KEGG:Bcell_2719 NR:ns ## KEGG: Bcell_2719 # Name: not_defined # Def: phage P1-related protein # Organism: B.cellulosilyticus # Pathway: not_defined # 5 152 7 149 169 81 34.0 1e-14 MNPHWLPGLIPWNQEHGETWEQYEQRLFHVFQNEFKESFQYDGKPVHYKRMPYDGIYPEA FMHLTTCNQDDSGSRLPDAERSERISWPRPVVEHHPFCEICGYAQCTRPWVWRKNDKNKD RVKIYLPNQQYLVVLGERRDYWVLITAYYVNRQWSIDKLEKEYNSRFSTRIQ >gi|197324945|gb|DS990229.1| GENE 899 970548 - 971252 484 234 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0879 NR:ns ## KEGG: BBPR_0879 # Name: rlfA # Def: phagic protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 234 1 234 234 441 100.0 1e-123 MTEYNLYCDETCHLEHDDSNSMALGAVIVPKGKRKEICVRIKEIKQKHGICATNEVKWAK ARDRMLPLYLDLVDYFFDDDDISFRALLIPDKNLLDHEKYNQDHNTWYYKMYFEMLKVVF DPRQSYNVFVDIKDTHSSFRVSQLWDVCSNNMYDYDHRIIQKIQPIRSDEVQIMQLTDIL IGAVCRSQRKLPEQHQSMAKRRIIERIIQRSGYKLDRSTLLKETKFNYFVWRAR >gi|197324945|gb|DS990229.1| GENE 900 971272 - 971664 335 130 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0880 NR:ns ## KEGG: BBPR_0880 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 130 4 133 133 133 53.0 2e-30 MGTRANNDVTAGARSIMQYCKSLQAKSGMTATEFAAECGFSRNYWFVRARFDAPLTISDC ERIANVCGMTLKELFTRALGSDAARAYAARERQNQITDDLVEPRFEDLPPQELAANRDPN ARLEAETPDE >gi|197324945|gb|DS990229.1| GENE 901 971645 - 971908 191 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSFRFTSGRPHPIAFAISSCVLCLRAISPRRLSLISSASLATRPPFLLLFADSYKLYSNE YYQMGIHLNTLQKVHNWVSLDYGNKSQ >gi|197324945|gb|DS990229.1| GENE 902 971805 - 972032 117 75 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0072 NR:ns ## KEGG: BBIF_0072 # Name: not_defined # Def: hypothetical protein with the helix-turn-helix motif # Organism: B.bifidum # Pathway: not_defined # 1 73 9 81 83 77 52.0 2e-13 MRDNLRGEMARRHKTQEDIAKAIGCGRPLVNRKLNGEKDFTLGDMENIAAMFDMTFLQLL TLLLQPIDNIKQIRP >gi|197324945|gb|DS990229.1| GENE 903 972077 - 972682 67 201 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKMKRSDVREWIPGEPLERVDFGNGCTGMNKSIPREPGQVGDFKRLIWKCRAIEADGGP CLDVLPSEYWIDDVKQGDYFDVVIDESSYGPCSFGNAWFYLAGVDKGWHLARRKRRSGLC ATLRGIFDSLTHRRENATDAEPLVTASKPSRESAEHSSSCGSTPPSLSRSGIHESYDCAT CGTTATQSRNHREAAAPHSRR >gi|197324945|gb|DS990229.1| GENE 904 972734 - 973516 791 260 aa, chain + ## HITS:1 COG:SPy0946_2 KEGG:ns NR:ns ## COG: SPy0946_2 COG3645 # Protein_GI_number: 15674964 # Func_class: S Function unknown # Function: Uncharacterized phage-encoded protein # Organism: Streptococcus pyogenes M1 GAS # 134 248 4 119 127 132 54.0 8e-31 MNNEIQRFDFRGALLRTLTDKAGEPWFVAKDVCDILGHSNVSMALDRLDDDERSKFNLGR QGETNIVNEAGLYVLVLGSRKPEAHEFKRWVTHEVLPSIRRTGGYIPTTDADDDMTILAK AVMIGQRTMEAQKRKIAEQQTRIVELEPKARFADAVAASDGTCLVGELAKMLRQNGMDIG QNRLFRLLQADGYLGKSGSNRNVPTQRAMDLGLFRIKETTVTHADGHTTVSRTPKVTGKG QRYFIDRYWGRAQPTLEAGA >gi|197324945|gb|DS990229.1| GENE 905 973664 - 974119 277 151 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0884 NR:ns ## KEGG: BBPR_0884 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 151 1 151 151 304 100.0 7e-82 MDWISYGLEGLTALFTGGAMAWNFAYRSRPKWQPYVVECGYGNPPCLLVKIVNVGNGAAT DVHATATHSPETPYGSRRKGFNSLVATGGCVYARIKVKESETEENGHKYLHYTPPEGASV TITWRQQPFIGHGKTKTWPLSKIPHDFSQGD >gi|197324945|gb|DS990229.1| GENE 906 974401 - 974643 385 80 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0885 NR:ns ## KEGG: BBPR_0885 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 80 1 80 80 139 96.0 3e-32 MSDRLTLDTGTGEPVHVKLAEGQDRASLEEDLMEAARNGTVVTVKGSVKGTSSDTIHINP SNALWWAIDDAPKQSVGRIY >gi|197324945|gb|DS990229.1| GENE 907 974763 - 974996 307 77 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0886 NR:ns ## KEGG: BBPR_0886 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 77 1 77 77 134 97.0 1e-30 MVPQYELKDASRIPLKDRLAWTIPQAASLYGIDYDGLRQAVNQGDIDTFRPPSKRGTPSR RHIRREEMDRYVKSLEE >gi|197324945|gb|DS990229.1| GENE 908 975025 - 975240 119 71 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0887 NR:ns ## KEGG: BBPR_0887 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 71 1 71 71 127 98.0 1e-28 MALRRIDAETLLTPPAPPRDTVIMFGLTGYAIRVTGKGASLMELDVDGSHELASIGKDQA RTFIQSIGGAR >gi|197324945|gb|DS990229.1| GENE 909 975237 - 975476 444 79 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0888 NR:ns ## KEGG: BBPR_0888 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 79 1 79 79 144 98.0 1e-33 MTDNDYRIEDGSEKGRPNYTLRRVKFTAAVVGLVVSVTLMLTWHGGGLTGALVVEGVYLA TALWLTVRFAPRDDVDGDV >gi|197324945|gb|DS990229.1| GENE 910 975751 - 976095 405 114 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0889 NR:ns ## KEGG: BBPR_0889 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 114 1 114 114 212 95.0 5e-54 MKEILPHWRFGPNSPVKDVDMERMTRGDRAVAEACRRAMESETWKELVILESLGVRFTEL VGRFVSEVASPVLEAMPGDAFHQGVKAQLTHMVKTKDGGETIRIIKTLAVKGRF >gi|197324945|gb|DS990229.1| GENE 911 976095 - 976625 468 176 aa, chain + ## HITS:1 COG:ML2684 KEGG:ns NR:ns ## COG: ML2684 COG0629 # Protein_GI_number: 15828449 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Mycobacterium leprae # 1 166 1 160 168 151 53.0 6e-37 MAGETIIAVVGNLTADPELRSTKNGRSVAGFTIASTPRTFDRQSQQWVDGDALFLRCTVW GDLAEHCANSLAKGMRVVAQGRLTQHSWEDEQHQKRSSVELQVDEIGPSLRYATAQVAKA QRGTAGAYGNPYSAPAGYTGGAAAADSLPPSDPWGTDQATSSSSFGSFGQPAEPEF >gi|197324945|gb|DS990229.1| GENE 912 976644 - 978041 1596 465 aa, chain + ## HITS:1 COG:SMc02801 KEGG:ns NR:ns ## COG: SMc02801 COG1475 # Protein_GI_number: 15967087 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Sinorhizobium meliloti # 16 159 49 189 296 105 40.0 3e-22 MGITIENLQVDDLHANPNNPRKQVGDVDELASSIRSQGIKQPLLVTPNGETDIDGHKQYR VVIGHRRLAAAKQSGLSTVPAIVEEMDARREREIMLVENTQRSDLTPIEEADGYQGLLDL GVGVKEMAEKTGRSDRFVRRRLKIARIPQETRDMSADFSQMSLDQLDRLAEFESDPDMQQ ELARADDFDWTYQRLSQERRKTIWHDKALKALAKAGIKVESFPDGKNFWNWHPHGYKAAH SFSDINSDFWTSFTGESDWPEARVYSYEYWFCTYTPIPADELEKDKAKTDKDNAIKARGR ELNRQAREFEAIAKANRTAWLKDNLHTLTHEHAETGICRLALADTVGWRSVFPYQSYKGE DVIRELIAFGWSLPITEHDDEHWSLECRENLDSIRMVLKDRPLRILDVLAARWESNIGWN YWRQRHGVDDMGIWYDVLERIGYQVSEDERKALKGAYLGGGDDES >gi|197324945|gb|DS990229.1| GENE 913 978038 - 978979 699 313 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0892 NR:ns ## KEGG: BBPR_0892 # Name: not_defined # Def: cryptic prophage protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 313 1 305 305 595 97.0 1e-168 MSIQALTWVIYGVASDIKHADFRTLLVLADHADPQGMGAYPSRSTISRLTGYSVRTVSYA LKSLESSGLISRGDQRIVSNLGGYKPTVWNLNMSRGAKTAPLKNAETPVQHDCTPAVQTD CTPAVQTDCTPAVQTGVQKTRTGVQTGVQHDCTRTISKEEPYIEPRESNARARKPIPIPA DWKPSEEHRALADRLGIDCDIEADKFRDRALDSGARSADWNAKYRNWLVKGKERGFATPK DSNARRRFTWGSEEVKRVLGPISCEGTDTYMELACKVADLLNQGLDPNMLRRQLANVPDN VLAEQLFEQEAAA >gi|197324945|gb|DS990229.1| GENE 914 978976 - 979167 196 63 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0893 NR:ns ## KEGG: BBPR_0893 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 63 1 63 63 99 100.0 4e-20 MNDMTIAHMTGILTSAIQAADRLELDALKSPALADMDLDRIRDIKRDCSTCINLLNQLGR ERR >gi|197324945|gb|DS990229.1| GENE 915 979164 - 979568 394 134 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0894 NR:ns ## KEGG: BBPR_0894 # Name: not_defined # Def: GP77 phage protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 134 1 134 134 249 100.0 2e-65 MSDRQFQESKRIALQRQGWHCLRCGTNIHDPSLWPGRSGHHRQLRRRADPAVRDLPCNIV ELCGSGTTGCHGWAHAHPAEAERFGYIIPSWRDPLSVPIRDWNGDWWWLLSDGTAQRLTQ IEIIEWQSDWKEQS >gi|197324945|gb|DS990229.1| GENE 916 979565 - 980143 775 192 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0895 NR:ns ## KEGG: BBPR_0895 # Name: orn # Def: oligoribonuclease Orn # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 192 1 192 192 386 99.0 1e-106 MRKQDKDLNVKPEALLWLDFETTGTDRDGSLPLEVGMECTDVLGEHSYGSLHRIIRPDYL DLLDMSPIVFSMHTDNGLLFELSNGSAGNDCVGAVASAVEEYLESLSQRFTLVPAGTNVD FDIDFLKRLDLNPDRWLSYRKFDLTTLRRYLRFIDCPEDPYKTHAGTHRVRDCIRRDIND YIRYRKLLKGAQ >gi|197324945|gb|DS990229.1| GENE 917 980143 - 980421 322 92 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0896 NR:ns ## KEGG: BBPR_0896 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 92 2 93 93 142 100.0 5e-33 MTTKGKTTKTVSKETRPRKWRKPVPCPTCGSRNIRFDPFARAVNRKTSAIRQFWVCSCER HGILILTRHTDLKEAIRAWNKEATRQGRKHSK >gi|197324945|gb|DS990229.1| GENE 918 980418 - 980723 212 101 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0897 NR:ns ## KEGG: BBPR_0897 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 101 1 101 101 187 100.0 1e-46 MRKRKPLALAGIGLTAITMFLLTPVFLLALAGCGSTPHEPEDSTTESATRSQCSSDSSKF QTCTVTMPDTRRVTCVFYNGYTEAAMSCDWAHADGADKVED >gi|197324945|gb|DS990229.1| GENE 919 980726 - 980923 255 65 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0898 NR:ns ## KEGG: BBPR_0898 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 65 1 65 65 89 100.0 5e-17 MAVTKRKAEMVVTWHERGVDIETTCRMLGVTPQEASAIIRQHAAERERRERAERMRPKFI EPPMF >gi|197324945|gb|DS990229.1| GENE 920 980977 - 981726 607 249 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0899 NR:ns ## KEGG: BBPR_0899 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 249 1 249 249 476 98.0 1e-133 MDRNCQNCDKPVEESWTLCKACRRGYARLLHRLRVNLYRLQSVARREYRLTEPGNGGRPQ GGDAPAPVDLHAVDLLDQTEQAIEQACADAGTWLGRWQWLAKRAPVILPLLCRASNAGWH MRRLTRACERIERIVDRMPRSRRIVGMCPECGREVLAAKGETLRLCKCGSPINVTELREQ SRAKAEAIHLTKTPAGMSQWLRENYGYEVSRKTITDALRRGKLPGSKPVEGGYWEFSIRE IVAFAMSKA >gi|197324945|gb|DS990229.1| GENE 921 981753 - 981956 256 67 aa, chain + ## HITS:1 COG:MA2135 KEGG:ns NR:ns ## COG: MA2135 COG1724 # Protein_GI_number: 20090978 # Func_class: N Cell motility # Function: Predicted periplasmic or secreted lipoprotein # Organism: Methanosarcina acetivorans str.C2A # 3 59 1 58 64 63 56.0 8e-11 MGVRFKEIEKMLRKDGWRLYSQSGSHCQYTHPDKPGRVTVPKHSGDLAPFTVRSIWKQAG INERRIK >gi|197324945|gb|DS990229.1| GENE 922 981953 - 982363 578 136 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0901 NR:ns ## KEGG: BBPR_0901 # Name: not_defined # Def: phage protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 136 1 136 136 271 100.0 4e-72 MKLVYPVVLYPSGVPGGYTVLCPDMPGLVTEGRNLPEALDMAVDAASGWVLGELEEGRHE PHATNIADVKPDGPGGIVTLISLDMDSYAEKYGRKSVRKNVTIPAWLDTFGEQAGINYSQ VLREGLERRYNDLQNA >gi|197324945|gb|DS990229.1| GENE 923 982365 - 982532 189 55 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0902 NR:ns ## KEGG: BBPR_0902 # Name: not_defined # Def: transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 55 1 55 55 91 100.0 1e-17 MPTPQFTEWHTAEHLENEEDIRLYLDACKAYDDPRLMSFAQREAAKARENFSKRE >gi|197324945|gb|DS990229.1| GENE 924 982685 - 982888 242 67 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0295 NR:ns ## KEGG: BBPR_0295 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 51 1 51 113 99 100.0 3e-20 MATEYLGVKQVAERLGITSGGLLNLKLPEPDAMIGRTRGWLPETIDGWNAKRPGRGVGGG RPRKHAD >gi|197324945|gb|DS990229.1| GENE 925 982878 - 983036 143 52 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKSRTLGIMSMLFAVISAMFAASGQPYGAAGFAVAAGLAGLFAGWRSDDGD >gi|197324945|gb|DS990229.1| GENE 926 983101 - 983229 195 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MELRDWMQLITSWAAIAVTIWIEVRRDKPDKKGRSKRKRRKK >gi|197324945|gb|DS990229.1| GENE 927 983339 - 983707 305 122 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0906 NR:ns ## KEGG: BBPR_0906 # Name: not_defined # Def: gp4 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 122 1 122 122 182 99.0 3e-45 MPSASRRERWYTSDRRYRLPSDWGRRKAAVRARARGRCQAASHAPGCNGVGTECDHIVAG DDHDLDNLQWLSHECHKAKTERENAERNRRRKLMRLHPSERQPGLLDWTPRRVGGDSPAT PV >gi|197324945|gb|DS990229.1| GENE 928 983912 - 984580 563 222 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0907 NR:ns ## KEGG: BBPR_0907 # Name: not_defined # Def: GP60 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 28 222 1 195 195 339 98.0 5e-92 MAVILFSKRCHDIVDCVNGTCEYCGSAMDAAGRGRPRRYCSDRCRTAAMRERRAGRNAIP YEMTHADRWLRWKRVTRGDGTTKRPITIAGRPASSADPATWCAWWDALGSTAGDGLGFAL GGGFACTDLDHCYDRRNHLTDWAKMLLAPVEGRTYIETSPSGDGLHIWGRCAPRAGVRAR GLVTAEAYSRDRYMTVTGRPWHHAPATLADLTFLFDVIERLR >gi|197324945|gb|DS990229.1| GENE 929 984600 - 984989 447 129 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0908 NR:ns ## KEGG: BBPR_0908 # Name: not_defined # Def: GP25 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 129 1 129 129 235 100.0 4e-61 MPTPKPTKHRMPTGLTRDGRGQRLWRDLTDRWEFTEAEYRDLENACHTADRIVKERRAIG DDYTVEGSQGQIVAHPLLAQLRADENHLSNLLNRLDMPEPEEQAAADTPGTRSARMRAVA DSRWSKAFG >gi|197324945|gb|DS990229.1| GENE 930 984989 - 986791 2307 600 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0909 NR:ns ## KEGG: BBPR_0909 # Name: terL # Def: phage terminase protein large subunit TerL # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 600 1 600 600 1181 99.0 0 MARLRNDNAAALIPDRTRELAEIADWYRRALADEPARRWNTGPTLIGPTWKRGADGGWLL PEHTLGWDFLAWCGYWLRDSKARTPWKWTLEQARFWLWFYALDDEGRPLHDNAVLQRLKG WGKDPMAAGGAVASCFAPLTFDHWDPRTGEPVGREEPNAWVQVCAVSQEQTKNTMKLLPG LIPMETRRHYGIQLGKLNMYALGDSRQIEAVTSSPLALEGGRPTFLIRNETQNWNSSNGG HDMDGVLSGNAAKSADGVNAKMLDICNAYRDGEDSVAQRVREAWEGTQGDPDSPDKGLRP KYMDFGLLYDSIEAAPDTPMTEESIPKVIADVRGDSDWLSTRRILKEIINPKNPVSESRR KWFNQCQAPEDAYVTSQEWDANEHPELELGDGETIAMFLDCSLTDDATALVACRISDGFT KPLGLWQRPPGKRGDAWKVPREGVDDTVREAMRRYHVVAFWGDPSHVLDDETGLHYWDPL FDAWHRDYGRRLRLWARPEGRDRHAVMFDMARLDVQKRFVAYVDQAYTAIADKDFPHDGD ARLRRHMLNARRQPTRAGMSIAKEGRESKRKIDLAFCAIAARGMRREYLNARKQGGGQIW >gi|197324945|gb|DS990229.1| GENE 931 986785 - 988191 2118 468 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0910 NR:ns ## KEGG: BBPR_0910 # Name: not_defined # Def: putative portal gp5 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 468 1 468 468 885 99.0 0 MVNAYENETQALAALTGQALPAWNAELPRLDRIDRWWRWNPKPIRLKKATAEHRMLRDMG HTPWLRLVVTTLAQTLYLEGVDVPGDDDNHTRAREFWQPWDRSRMTARQIPLHQAAIAYG TAYETVRAANGPDGIRARIECWSPREAIALYDDPARDTYPQLFMRRRRLNETRESLELWD AYNIWTWIHADGAWTFSDATPHNATDPNGQPVCPAIRFTNQIDLEGRTPGEVEPYIALAN RLNKDNYDRMLAQHYNSWRVRTATGLDMTELSDAQREDRKAKLAQEDILAGGPDVKFGTL PETSLDNLVNARQADVEELAAVSQTPTTAFGKMVNVGDAGIEESRAGFYAKRNERRKSFG VGHLDALRLAAGIEGRTEDAANFDLTPLWEDTDTRTVSQAVDALGKASKMLGVPQEELWD MIPGVTKTRADSWRAWKENHPDADALAVQAYASQLAPATTGGDDGLDR >gi|197324945|gb|DS990229.1| GENE 932 988175 - 989389 1081 404 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0911 NR:ns ## KEGG: BBPR_0911 # Name: not_defined # Def: gp4 phagic protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 404 1 404 404 752 99.0 0 MASTGKGALLTDQHRRRQVSLAITADSQARRAWDATLDLNDLTGTQPIWKRTMLNLIQTW WRISEQAALAYLPQYREAETGEGPGIEIGVQQFDRRRAGEKLDWLGSTNVKWHLASGDTP EDAYRKARELFLGVFHEAVLTGGRSAIEHWAQQDTRAIGWRRVSDGDPCAFCAMLVTRGP VCTSAKKAGLRASDGKKYHPHCGCTVEVVYGDWEPTQQEQQWIDEYYKAAESLPERTPRT AQDILPIMRRNGAFRDSRSIRGTKTALAARRAERYDRKIAGLRDKTLNHILRGEGDGRRG GHLYGTGVAGKTEFPQQWDERRIATAINRTIETPDWHIDAPDPRALHRFGKTIDGVQIEV KAYLQDGEYVIDRAYPVGGEGVTRNTENGRIDVKASRSKKWRQP >gi|197324945|gb|DS990229.1| GENE 933 989386 - 989646 372 86 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0912 NR:ns ## KEGG: BBPR_0912 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 86 5 90 90 152 100.0 6e-36 MSAASERMTRLSLESLKVVEGLNPDIEEDAMEEIDCGEWDGAIMDALDLAHDRKDLWPKF PEEVKAMTRDPEWPDLHRFAYMFDRT >gi|197324945|gb|DS990229.1| GENE 934 989983 - 990537 778 184 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0913 NR:ns ## KEGG: BBPR_0913 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 184 1 184 184 262 99.0 5e-69 MADDTEDQVKEPDTDAAGNEPNQPTGDSGQKPPWERDGEEFSPEKAWNLIRNLRADNAKL KESDDAKAVKLREIEDANLSEKEKADRDLKEAREQLDAIRTQKAWAEAMAEHQCLTKEDF DLIGAGSPQEVREKAAKLAARLDAQAASKTDSNHINPLLRADPTGGTDPTSKKTDDWMRS ALAR >gi|197324945|gb|DS990229.1| GENE 935 990567 - 991523 1638 318 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0914 NR:ns ## KEGG: BBPR_0914 # Name: not_defined # Def: major capsid subunit gp9 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 318 1 318 318 588 99.0 1e-166 MADNFSSQILRGDLGGALIPDEISQEIIQTLPQSSVLLTRARRVPMSSKKKTQPVLASLP EAYWVSEGGLKQTSKTGWEDVQITAEELAVIVPIPDSVVDDAKINLWDTVKPLIAEAMGK KIDQAGIFGVDKPSTWGNDILAGATAAGTNVASGTGVDLADDIAMIGQKLSEKGFAVNGF ASQPGLNWQLARLRDANGQPIYTPSVAAGNPASLYGYPLNEVANGAWDTTKAMLLAADWT KFVVGVRQDITYKVFDQGVISDTAGNVVYNLMQQDAQAMRVVMRVGFAVANPLTRIAAKG SQYPAGFLTPAASRKAGK >gi|197324945|gb|DS990229.1| GENE 936 991523 - 991957 494 144 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0915 NR:ns ## KEGG: BBPR_0915 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 144 1 144 144 137 98.0 2e-31 MTAKQVRFVTNDEPFDNQNVAELAAFDAAGKPVTITGGSAPTVDTLHGATDTGRAVMKAT NAAAARSAIGAGTPYALPAAGTAIGGVKKATAVADLASAADTAAIIATVNAVLAAFRASG AMAAPTSADQPSEVQSAAIVTPQQ >gi|197324945|gb|DS990229.1| GENE 937 991971 - 992468 733 165 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0916 NR:ns ## KEGG: BBPR_0916 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 165 1 165 165 301 98.0 5e-81 MAEKPPFAEPDALAEWIGEGIDADAADWKRARRVLRAASNLVRTQTGRDWLNDDGTLDNP LPEQLVDVTVACAARFYLNPNAETQWSRQIDDAMDGGSRKVDEPGMSLTASEKATLAKLM ADASPLIAGVGVISTTRGEHASQDMSPYWSEDDGRPGFLHARLTG >gi|197324945|gb|DS990229.1| GENE 938 992465 - 992899 369 144 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0917 NR:ns ## KEGG: BBPR_0917 # Name: not_defined # Def: putative phage associated protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 144 1 144 144 278 100.0 6e-74 MSAGFSPASLRRLRSWATGLMTDECRIVSHGRPVTDPHTGKATSPETVRYEGRCKVQTSG GLAAENTEGGIVQALGAVTPVWSLYLHLPYGTTGLSPGDVAEITAATDPNLKGRKFRLLN MQSEKTHATACRWNVKEVGNSNEQ >gi|197324945|gb|DS990229.1| GENE 939 992889 - 993317 454 142 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0918 NR:ns ## KEGG: BBPR_0918 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 142 1 142 142 239 100.0 2e-62 MSSDVTIDAGELTAFGRRVAAAHAMAGVSIAKAVKKGAQVVKEKTQSDLNSSSNGGLHVV RVRYELGTTGSQIYADIGPEDSGKTREHGHTGPTVAAIAFYGTARGGGTHKPPEHYAEEE LPTLAEYVGDAADDMLIGAIGL >gi|197324945|gb|DS990229.1| GENE 940 993314 - 993724 540 136 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0919 NR:ns ## KEGG: BBPR_0919 # Name: not_defined # Def: transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 136 1 136 136 264 100.0 9e-70 MSVMDMTSAVLGMIPGLDQPVYLNQEPDESEMPPWVIATCTTDGHRSTEAARYTAHVGRL EIRVVDLTADAVNVICDDRIIPAMKYRVPAKTSGFTVGQLILDADSGAYAAGLTADDTSR RYQVRVLRFRFTWTRP >gi|197324945|gb|DS990229.1| GENE 941 993798 - 994340 801 180 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0920 NR:ns ## KEGG: BBPR_0920 # Name: not_defined # Def: GP28 # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 180 1 180 180 318 98.0 6e-86 MTLKLGTEIPGTSAEGNITTLWVPTIADIKRPTMAELEAGTDISNYVMLGGWTFEPSQDT VSDQRENSTQDFGAPGRKSAGDISIEVIDNTNTEHAEQNKAVTLMAEGNSGFIVRRRGMA TDAPLAAGQKLTVVSVKCGEKKVLNPDANTMIRSAIPLFAQAPGWESETAEIAAAAASHA >gi|197324945|gb|DS990229.1| GENE 942 994435 - 994941 681 168 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0921 NR:ns ## KEGG: BBPR_0921 # Name: not_defined # Def: putative DNAase primase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 168 1 168 168 284 99.0 8e-76 MALEVKRKRVEVDLILDQEKAERISQLGEQLARAAASHVTEGANAAAKRIAKQIDELREE VSGQIVHLTLEALPLSQWRQVLEANTTTTKDGRTAQRLEDITADALRLMIRKSVPDTPVE DIAAIIPELSDGQLSPVWYAIQNLNARMIDPKDYLGQASRIIRGSSGN >gi|197324945|gb|DS990229.1| GENE 943 995004 - 995300 291 98 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0922 NR:ns ## KEGG: BBPR_0922 # Name: not_defined # Def: phage terminase protein large subunit-like protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 98 1 98 98 189 100.0 3e-47 MERDGHRRITGYTPESEWDQTERDWMLALDDYEHSLCPRCGMPVSVCHDELTPTRYTAEA GVCQISLMRDIAAEDWRKQHDGEAGIKTMSLTTAIKAR >gi|197324945|gb|DS990229.1| GENE 944 995311 - 998445 4006 1044 aa, chain + ## HITS:1 COG:ECs2641 KEGG:ns NR:ns ## COG: ECs2641 COG5283 # Protein_GI_number: 15831895 # Func_class: S Function unknown # Function: Phage-related tail protein # Organism: Escherichia coli O157:H7 # 23 494 155 598 696 135 27.0 5e-31 MAGGLNRNITVRLLADTSKFTAGMAKVSAEAEKTSTTMEASGGKTKLLTAGIAAAGIAAT ALGVAAVRMAADFDASMSTVQANTGASADEMSLLRQAAIDAGADTVYSATDAADAINELG KAGMSTSDILSGGLNGALDLAASDGMEVAEAAELMSSAMAQFNLTGADATRIADALAAGA GKAQGSARDLGYALQQSGMVANSFGISMEETVGTLTSFANAGMTGSDAGTSLKSMLIALA NPTKKAQNLMDELGISAYDAQGNFIGLKALAGQLQTQMSGLTQAQRNQALATIFGSDAIR AANVLYNEGADGIADWTKKVSDSGYAAQQAAAKNDNLRGDLENLSGSFESMMIKLGEGGQ GPLRKLVQTIDMLVDGFGQLPAPVQQTIVLSTALAGGIVALHRAMAPLNSSSSQLSKNLG MVLDPGQRLISMSSQLYTGATQIGAAFSTQSRQLEVFGSTVSRTSGVMTGLKTMGSGVID LLGGPWGIAITAAGLALFDFAQDQQAAAQRVDELTQALQSGQTAAEYFGKALSDSSSSRY TDDFLSRWASGYDDIAEAIDRMGISHQTYIKAIQGDKDAIEQVHAQADEYAASLNLIDQW WNNPSSAAYEALAEQQNVFKQATKDAAEAEKAATEASMGRTAALITGNDALAGTADASAK AADSDTILQESFGATKDAVNETSAALGEVIDALNTYYGFALDASNASIALESSFDKASEA VGKNGRTLDINTEKGRDNTSALNDVAEAAQKAMLAHAKNGEGLEQITPIVQRARDQYIQL AQQMGMSKEEAEASADAYGLNTDKLRDLIVQSGIASGQTGDLQAAFDRLGLSTSDVKLKV DNMVGSMRLIPAEKTTTVRVNDLASNAIHTIREGIELLQSKTVTIRTNVITNETTIRSTK GSMIGRPTSYTGGYYAGNGFAMRGYYGGGIVEGLLPGTPPLSAQADNITLANARLRSGEF VSNDKSVRYYGADTYAAMNRRQLPREMFTGGAEQPGPSVADISQGVMDALERTSVTLVFD DRTVAARLAPAMDRELGRRKGMGL >gi|197324945|gb|DS990229.1| GENE 945 998442 - 999221 875 259 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0924 NR:ns ## KEGG: BBPR_0924 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 259 1 259 259 493 96.0 1e-138 MSVFQRMPADPLMHILLDGRPLDWYGLSATDGVLAIEAPDLAVAYQSAPGMAGSHDVTLD DPLGCAYPGLRRIALGVVTVGEDDEMMDARRRLGSLIGRLATLSYRELPGQWRGRVTIKD WDERMLGPCRVDCATTIVMDAYPHIMGRARRHALREGANLLHVTGNRPAWPVLTLTTSRA VSALSIRDGRGHTIDIRPATTLPAGTSVLVDCKAQTTRANGTLAPVSLDTDYFALLPGMN TLTLSGAAGSCEHEPEWMI >gi|197324945|gb|DS990229.1| GENE 946 999223 - 1001085 2619 620 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0925 NR:ns ## KEGG: BBPR_0925 # Name: not_defined # Def: gp4 phage minor structural protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 620 1 620 620 1138 98.0 0 MFHVFDRWGNPKPAPMTVLAARRTQNVDGTDNLDLLSDLDLEKGDRVAWRDHMGLWREWL VNSIDTSRSDRLPLSTAHCVDAIQELASTYIEDKRNRSATALTCAKKALAGTRWILGTVH DGTKTTEADLAFYHTNALSAIQDICATFGLEAVTTYQPDATGTRIATRTLSLVSRRGATT PTKRFTYGKDLASIRRTIDATQVATRLYGWGKGVATTDDDGEETGGYSRKISFADINDGK AYVEDATALAIWGIPGPNGTRIHSEADAEFPDCEDPKQLLTLTKEALKTRSQPVVSYECD VTSLAAAGVNAEGTDIGDTVHIIDTSFPTPLRLEGRILQIEQDLAGDQTATTITLGNITT GITRQDDAWRRQLDQLISNSGAWNDAATGTKPYITDLINRINQIMNTTGGYTYLKPGQGI YVYDKPEDQNPTQCIHIGGGYWRIANSKKANGDWDFRALADGNGIYANTIYTGKLSDAAG HNQWNLDTGELATRGMTATSITAEGTFTCGSKDWYGIELNSIGQLAGYRKGKKVGYIDYS GGMYEVSNPSKVYYGLQLQGGCLRISTPILSVAKTTDTHVTTTHAYNGKHHYISKITSSS DGTITWFQSTTEYINGFCIN >gi|197324945|gb|DS990229.1| GENE 947 1001096 - 1001497 511 133 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0926 NR:ns ## KEGG: BBPR_0926 # Name: not_defined # Def: major factor subunit # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 133 1 133 133 198 98.0 6e-50 MPRITRYWAHDPIGNSEGILAGYEPAALKAAQDRGIIFIAELDDGTRLRVDASDVTEPEP ASYTIATPDYVASRVTLITDALDAVADILDPQPAQTALAAANDAAADTSGDDARRRLRDA IAHLNDLTKGTGK >gi|197324945|gb|DS990229.1| GENE 948 1001494 - 1003326 2606 610 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0927 NR:ns ## KEGG: BBPR_0927 # Name: not_defined # Def: tail fiber protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 610 1 610 610 982 97.0 0 MTLDGFRDVTETPISLDFSNSWIADIRLNAGDRDGRTITVAITDNGQPITSTTGIKSVAL AYNTAPGVEVGDRVTMSPVSGEATATYRATLPRRAIAKPGVIALGVEVTTADGAKICSRN FKGVVERAVWDAESTQGQDSLTRLEQLIADGGAAITRVNNAITDANNAVAAANQVIADAR ITGGNTTTLDPNQPATSSLRGSGLQRILDLSIPRGAGVTSAGATTLDPNKPATASMLQAG SKGDYTLMVGVPRGSRIIGVGANTVNPSQEAGASMSTDGAGDMSLILDIPRGSRIAGVTA RTLDAGMDATVTATRDAAGDATLAFGLPRGEKGDKGDPGDAGQVATATVAGVVKPGDNLS VRADGTLDAAAAQYELPVASDTTLGGVKVSKVDYTDARTFPVVVCDGEKLGLSFKLGDNA MPDGIEFYGTENTTIGLKKATQDALGIVRGGGKGIHVAVDGTLNLDLPAATAGAIGGVKP DGKTITAAADGTITAVAQTGPVEYRELVGYENAAQGYAVRVSDRTWLCCFNSFAMQTDGT TRLPYFYAFLRQAGSSSLTALVANPFDTNGITLLSTDGEQMRFLYGGGGRWAGVRAVSGL DAATLILTEA >gi|197324945|gb|DS990229.1| GENE 949 1003440 - 1004201 525 253 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0928 NR:ns ## KEGG: BBPR_0928 # Name: not_defined # Def: tail type measure protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 253 20 272 272 313 99.0 3e-84 MSLVPTRRVTVADAIRLPVAQTVRLTAGEATAEVMPSTTQWAWRASELVAGGIVRYVEVP DKESAEYSGLADVDPKTLDQSSETVAAWELVTRAAQGALDRIGTIDDKVQSAAASAAAAK ASETVASQESAKAAAAAGKAQSSQSEAAKSAQAAHESEITANGLIGEAKTIAGQLTETAG QVKQDAATASRAAQTATVKADAAATARDRAETAGRGRRMAPKRLDRLDRTVGFHHHTQRG SPMRHPIREEPHG >gi|197324945|gb|DS990229.1| GENE 950 1004194 - 1004601 269 135 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0929 NR:ns ## KEGG: BBPR_0929 # Name: not_defined # Def: phage minor structural protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 135 1 135 135 239 99.0 2e-62 MADDIITSVVAGLLIAAISAIAAGLWHQLKNLRSQIADEETRRSEHEQLMADMRRGCEHE KLVDEALRTLLLCKLEQQQDTMVHDHHGVADNDFKLRAQRVYDAYHGLGGNGHGTQINND IQNAPIAPRLGGKPS >gi|197324945|gb|DS990229.1| GENE 951 1004829 - 1005254 660 141 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0930 NR:ns ## KEGG: BBPR_0930 # Name: not_defined # Def: phagic holin Spp1 family protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 141 1 141 141 187 98.0 1e-46 MANTTGVADHKATGPAIPGLTVERTKAIILLIVQLFSVAQTGLSIAGISQLPFTTDQVST AITGVIAVIASVYAWWRNNNLTGAAVQGQQLTNAIKANIIATATDATTGTAQAAYAVSDS RGADATADVAPIEEVSYGDGE >gi|197324945|gb|DS990229.1| GENE 952 1005238 - 1006071 814 277 aa, chain + ## HITS:1 COG:L82453 KEGG:ns NR:ns ## COG: L82453 COG0791 # Protein_GI_number: 15672466 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Lactococcus lactis # 76 277 61 259 259 76 34.0 6e-14 MATASEVLRIAAGEIGYSRWTDPQPGTKYGRWYAQSHGSYYGASGVPFCAMFVSWVMSRA GQAFPGLPAAYVPYVLSAGRSRAVSTRSAKPGDIVIFNWDGGVVDHIGFVEANHGSYIQT IEGNTNNGRVARRTRAWNTIAAILRPAYSGSATSSGGGTASSGGTGRLTVDGSCGPATIR RWQQVMGTSVDGIISGQYRPDGRTWGRPALVDSCVRYGGGGSNLIRAVQRKLSLTADGLL GPATIRALQKHLGVAQDSWFGPGTARALQSRLNTGRF >gi|197324945|gb|DS990229.1| GENE 953 1006130 - 1006324 264 64 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0932 NR:ns ## KEGG: BBPR_0932 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 64 1 64 64 97 98.0 2e-19 MTFADMLDERGIRQSQIARAAGLTRQRVNEWVRGVRDPRLMALGTARRVADALEMTIDEF ESRL >gi|197324945|gb|DS990229.1| GENE 954 1006321 - 1006464 124 47 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224283039|ref|ZP_03646361.1| ## NR: gi|224283039|ref|ZP_03646361.1| hypothetical protein BbifN4_04340 [Bifidobacterium bifidum NCIMB 41171] # 1 47 1 47 47 62 100.0 8e-09 MNDRLGLCSLVMALGAFAAGLSGHSIPAGVLALCAGTLGYLAGRRNG >gi|197324945|gb|DS990229.1| GENE 955 1006681 - 1007013 75 110 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSLRTDSNLLFAPYDITRNKKRPLPQHCEPHLRSSNLNFFSPTIGVRFRLRGFFVYPFFP CFTLFFRENVGKMWAKIGCREWCGYGVSGFLRLDIVTRLGYNGGVGKERR >gi|197324945|gb|DS990229.1| GENE 956 1007172 - 1009478 3600 768 aa, chain + ## HITS:1 COG:L0100 KEGG:ns NR:ns ## COG: L0100 COG0620 # Protein_GI_number: 15673237 # Func_class: E Amino acid transport and metabolism # Function: Methionine synthase II (cobalamin-independent) # Organism: Lactococcus lactis # 1 765 1 753 759 853 55.0 0 MPALTSVSGFPRIGQNRELKKIIEAYWKGAASLDEVRGTAKELRAKHWKLQAQAGVDLIP SNDFSYYDQMLDTAILLNVIPQRYKRLAFTNPEETLFAMGRGYQGDKGDVTALPMKKWFT TNYHYIVPEIEESTEIRLNGTKPFDEFNEAKARGILTKPVLIGPYTFLKLARNAQAEELT YDKGLVNAVAAVYAEVIKRFAALGAQWLQLDEPYLVLDKEDGDVSLFKSLYAKILPARED KIKVLLNTYFGHIADVYETVNLLGFDGIGLDLNEGKDENLAAVEKYGVAENTTLFAGVVN GRNIWRNNYAVSLGLIDALRQKTDNVAVSTASSLLHVPFSTEGETALDPAVLKHFAFAVE KLTELKEIAVLADSDEDAKKASADLAANQALFDGTRVAADPAVAERIAKLTDADFVRQPA RAERQKEQRVALGLPLLPTTTIGSFPQTKEIRAERAKLRKGEITKAEYDEFMKAQIDACI RHQEQIGLDVLVHGEFERNDMVEYFGQNLNGFLFTKNAWVQSYGTRCVKPPIVWGDVSRA NPITVEWSAYAQSRTNHVMKGMLTGPVTILNWSWPREDITHEQQTQQLALAIRDEVLDLE AAGIKVIQIDEAALREKLPLRKTDWHAKYLDWAIPAFRLVHSAVKPTTQIHTHMCYSEFN DIIRDIDAMDADVISFEASRGDLVVLDAIHDAHFETEAGPGVYDIHSPRIPGGQEIEDRI YEILKKMDIEKVWINPDCGLKTRGNAETWPSLEHMVAAAKAVRAKITK >gi|197324945|gb|DS990229.1| GENE 957 1009621 - 1010469 1401 282 aa, chain + ## HITS:1 COG:Cj1202 KEGG:ns NR:ns ## COG: Cj1202 COG0685 # Protein_GI_number: 15792526 # Func_class: E Amino acid transport and metabolism # Function: 5,10-methylenetetrahydrofolate reductase # Organism: Campylobacter jejuni # 6 282 4 279 282 228 40.0 9e-60 MHTPMFSLEVFPPKRDAPVGTIYDTLDGLEGLNPDFISVTYGHGTHSDRTATARIANTIH GEYGIPAVAHLTALYSDEAKIDEALDMFEAAGVSAVLALRGDYIDGEEPVGRFNHASDLA AYIHDRKPDLKVFGACYPEGHYSAASLDEDIGNLKIKVDAGVTHLISQLFYDNDDFYRFL DKAHAAGIDVPIEAGIMPVRGAKSVRRMAKVNASRIPAKLEALLDRWGDDIQNLRAAGII YASDQIADLVAHGVDGVHLYSMNHPATTRRIWHNVEPLFTVE >gi|197324945|gb|DS990229.1| GENE 958 1010582 - 1010914 357 110 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0935 NR:ns ## KEGG: BBPR_0935 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 102 1 102 110 129 96.0 4e-29 MQLSSAELIVTIVFAIVGLLMGFVSGAMPLQPQRMTPAQATAQKVLGFAIVAVVVVLALA SMNVAMWTTLIAVALGIAIANVPVIRRAVTTRIAWFAPKPDFRRSKRRRR >gi|197324945|gb|DS990229.1| GENE 959 1010996 - 1014094 4059 1032 aa, chain + ## HITS:1 COG:Cgl2179 KEGG:ns NR:ns ## COG: Cgl2179 COG1391 # Protein_GI_number: 19553429 # Func_class: O Posttranslational modification, protein turnover, chaperones; T Signal transduction mechanisms # Function: Glutamine synthetase adenylyltransferase # Organism: Corynebacterium glutamicum # 45 1031 49 1036 1045 578 37.0 1e-164 MTVPGTFDTSARELIHAGLQNLDEARSLFRQLSASGFDAARCGLLLDALQHVCDPDVALR NLVDIVNAQVSQGRALDDIMPDDTAFRQLVAVLGVSDAMGKLMRFRPDLVQAAATDHCNS HLYNHDQRRAHVLESVGADPNDRMSPTATMDLADAATALRRTYRNQLAAIIAQDTMSDDP IALQPRISSELSDLADAALEGALAIARHEIAGSEHCRFAIIGMGKLGARELNYVSDVDLI YVVKAADADTSQQQLYRIGTKMGTMLQRVCQSVIMGVAEPALWQIDGGLRPEGKDGSLVR TLESHQAYYEKWAQNWEFQALLKARPVAGDPQIGDAYMSMTRPMVWSASKRKNFVYDCQQ MRKRVEDLIAPALKDREIKLGRGGLRDVEFTVQMLQLVHGRTDETLRASATLESLRRLSE GGYVSRKQAAKLARDYSFERVMEHRQQMWALKRTHLFPDLGDGSVGGLEKKRDVNVEKLS QNPELRRLARAFGLHAEELVAKYDETRREVRRLHMDIYYRPMLPIAALNGEDFSLAPQVA YERFASIGFADPEAAMRHVAVLTAGVSRASKINRILLPAVLQWLGQGQNPDMGLLNWRKL EERFGTDSEYLGFLRDSNSAAQRLCHILSNSRFLGDALNKSVESVTWLGDDDALVARSRE SLDVQCLSSLSRNADGINDFATSMRAMRRHEIERIGLARLSGVMDETACLTGMTDVYDAI IDAALTWAIRYQTSAMGLGEPPAAIAAIGMGRYGGQEVNFSSDADMILLYRPADGADEQV ANQFARKVVDALRQVLQGPTTLEPKIEIDLDLRPEGKNGPLIRSYASCREYYSSWANTWE HQALLRARFVAGDRVLGEDFLHDIANPLRYPISPLTDAQLGEIRKLKARMEAERLPRGVR RDRHLKLGKGGLSDVEWTVQLLQLQHAGDNASLRLNSTLATLDELERRRFIDRGDAAVLR KAWRMCTAARNGNYLWNGRVSQADILPDDMYSLGGIAVYLGYDAHRGQHFENDLMGTMRK ARDVAEHLFYGR >gi|197324945|gb|DS990229.1| GENE 960 1014234 - 1015196 1277 320 aa, chain + ## HITS:1 COG:CAC2654 KEGG:ns NR:ns ## COG: CAC2654 COG0540 # Protein_GI_number: 15895912 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, catalytic chain # Organism: Clostridium acetobutylicum # 3 304 4 305 307 358 57.0 5e-99 MVGQSVITLDTLSISQIRDLLHKAAYIDANRKRVAHTCDGRVLATLFYEPSTRTRLSFET AMLRLGGQAIGFAGAQLASVSKGESIADTLKTVSNYVDVVAIRHPKEGAALVASRAASVP VINAGDGGHMHPTQTLADLATLQSRFGRVTDLTIGLCGDLTFGRTVHSLIETLCRFGNVC FVLISPDELKTPRYVIDRIKATPSCSYVEVKDLVSVIGDLDVLYMTRVQQERFFNEDDYL RLRDTYILDEDKLSKAKPSMAVLHPLPRINEIAVEVDADPRAAYFEQVKNGMLMRMALES SVVGDQLPGYEPLDPKEVQA >gi|197324945|gb|DS990229.1| GENE 961 1015196 - 1015615 648 139 aa, chain + ## HITS:1 COG:CAC2653 KEGG:ns NR:ns ## COG: CAC2653 COG1781 # Protein_GI_number: 15895911 # Func_class: F Nucleotide transport and metabolism # Function: Aspartate carbamoyltransferase, regulatory subunit # Organism: Clostridium acetobutylicum # 1 135 2 136 146 120 46.0 8e-28 MEVTSIQNGIIIDHVPAGTALKVLEYLKIDPSKTRLALIMNADSHLYGTKDIIKIEDEEN VNLDVLGLVARQATVGIVRGGKIVRKLKPTLPEHVVNIITCVNPRCVTTTERGIDQMFHL VHSQRQEYRCDYCDEEAKF >gi|197324945|gb|DS990229.1| GENE 962 1015724 - 1017148 1872 474 aa, chain + ## HITS:1 COG:BH2538 KEGG:ns NR:ns ## COG: BH2538 COG0044 # Protein_GI_number: 15615101 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotase and related cyclic amidohydrolases # Organism: Bacillus halodurans # 17 470 26 421 428 225 33.0 2e-58 MLTLRNIRVWDTGEIIDMVIPSADARNQPEDGGVIEGDFDATGLTVAPGFADPHVHFRDP GQTYKESMVSGCRAAASGGYTNVLIMPNTVPAMDGRAVKAGAPGAAEVLDAGCSDVIDYL QHYERVHDVSLPVRYDLCVCASKDRAGVEASDPADWLRHLDGHDMDGKDAWQLAHPVTAI SDDGAAVTPGLLDQVLANVKESGLYLIEHCEHHDTGAVNDGPVSRKLGVPGIPEDTELKI VARDIEKARETGVHIHFQHVSTAISFDAIRKAKAEGLPITCETAPHYLALCDEDLLEYGT LAKMNPPLRSAVDRQATIAAIADGTVDLLATDHAPHTLEEKERGFLEAPNGIIGLECAYG VCHKVLVDGGYISDQRLIELMSVAPSRLMGHRPTDVAALLNVTAPCASKRTLDLSTVEHP ENVDLAILNTSEAWTVDPEKFLSKARNTPFGGWHVTGRPLATIIGSTLVFSRIH >gi|197324945|gb|DS990229.1| GENE 963 1017219 - 1018184 1238 321 aa, chain + ## HITS:1 COG:CAC2652 KEGG:ns NR:ns ## COG: CAC2652 COG0284 # Protein_GI_number: 15895910 # Func_class: F Nucleotide transport and metabolism # Function: Orotidine-5'-phosphate decarboxylase # Organism: Clostridium acetobutylicum # 1 316 3 283 286 207 38.0 3e-53 MDRLIEAIEEAQNPSIVGLDPTPALVPPQVVDSFTDEVRESIEDESELPAARLAVAYFEF NRAIIDAVADIVPAVKPQIAMYEAIGPAGVDTYTMTCEYAQQQGLYVLGDIKRGDIGSTA AAYAGHLSGVTDGDGLYDPWHEDAVTVNPYLGTDGITPFVEAATAHDKDIFVLVRTSNPS SSELQELELAGGEKLYERTADLVEGWGADTIGRHGYSHVGAVVGATHPQEGKALRARMPH TFFLVPGYGAQGGKAGDVAGMFDADGSGAIVNSSRGIIGAWRKSEEYREDMSADDALDLV ARCARKAAQDMRDDLRVNVYR >gi|197324945|gb|DS990229.1| GENE 964 1018303 - 1019133 770 276 aa, chain + ## HITS:1 COG:CAC2651 KEGG:ns NR:ns ## COG: CAC2651 COG0543 # Protein_GI_number: 15895909 # Func_class: H Coenzyme transport and metabolism; C Energy production and conversion # Function: 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases # Organism: Clostridium acetobutylicum # 35 272 15 242 246 126 29.0 4e-29 MPAATFTPVDDVVSQATSAGFFPGRHAVDVTDVRRLSDGVFRLTFRDGYIAAHAKAAQFV NLFSHDSMMLMPRPFGVSEVRDDLVSVIFAVVGKGTQEFSRLHAGDRIDVLGPLGRPFNT KRDAHYLLVGGGLGVPPLIYAAQRLQASEKSHSTAVFGYRNVHFADEIVSSYAHRTLSID ESEGNVITLLDRMESQGELAAGGLEPVVLSCGPLPMMKAVALWTTARGIECQLSMEQRMG CGYGTCVTCVVDTVAGRSKVCSDGPVFTAQQLGWEA >gi|197324945|gb|DS990229.1| GENE 965 1019136 - 1020083 1244 315 aa, chain + ## HITS:1 COG:aq_046 KEGG:ns NR:ns ## COG: aq_046 COG0167 # Protein_GI_number: 15605646 # Func_class: F Nucleotide transport and metabolism # Function: Dihydroorotate dehydrogenase # Organism: Aquifex aeolicus # 23 301 9 290 306 270 48.0 2e-72 MDAVTDTNVYEPHQWKHSTIVAGVEWKNPVGTASGTFQLAACRWFYDVSQMGAICTKGVS PEPWQGNPGPRTAETPAGMVNSVGLQNPGVDHYLVDELPKLKDLGATVITNVAGHSDDEY AEVVAKLADSRADMLEINVSCPNVNHGGMSVGTDPEALHRLIDRLRKITSKPMIVKLSPN VTDITTIARAAVDAGADALSLINTLVGMRIDIRTGEPILSNRTGGVSGPAIFPIALSYVW RVRQALPDIPIIGIGGIDSGEKALEYLYAGANAVEVGAAALYDPTAPLRVARELDDLLDS RPELAAKLAAGETWR >gi|197324945|gb|DS990229.1| GENE 966 1020105 - 1020803 966 232 aa, chain + ## HITS:1 COG:CAC0027 KEGG:ns NR:ns ## COG: CAC0027 COG0461 # Protein_GI_number: 15893325 # Func_class: F Nucleotide transport and metabolism # Function: Orotate phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 8 231 6 222 224 187 43.0 1e-47 MTIATLDHRFTEFLLESNALKFGDFTLKSGRQSPYFINAGAFNDGRKIATLGAFYAEKIA EEIKAGRLPHDIDTVFGPAYKGIPLAVSTAIALTSGHGMQVGYTFDRKEKKDHGDGGMMV GTQLADGMKVLLVDDVMTAGTAVREVIPKLKAEADVDIVGLVLSVDRMEKTKDSDLSAVA AVEKEFGFPVLAIANVREIFEAGRNIVTSDGQPYVTDAIKSAADDYLERYGA >gi|197324945|gb|DS990229.1| GENE 967 1020912 - 1021097 120 61 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0944 NR:ns ## KEGG: BBPR_0944 # Name: not_defined # Def: MerR family transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 61 1 61 61 74 93.0 1e-12 MSTTTAWHTIREAAMISGLPESTLRYYEQIGIIAPIARDPSSGHRAYSKSSSKRTGTSSS R >gi|197324945|gb|DS990229.1| GENE 968 1021167 - 1022210 1242 347 aa, chain + ## HITS:1 COG:L190278 KEGG:ns NR:ns ## COG: L190278 COG1063 # Protein_GI_number: 15673531 # Func_class: E Amino acid transport and metabolism; R General function prediction only # Function: Threonine dehydrogenase and related Zn-dependent dehydrogenases # Organism: Lactococcus lactis # 5 347 1 345 348 390 56.0 1e-108 MIEMMKAAIFVEPGKMTVEEVPKATLRQDDDIVIRVVRTCVCGSDLWFFRGLSRQAAHSQ VGHESIGVVEEVGAAVESVKPGDFVVVPFPYSCGKCPVCKAGFESVCPHGGYFSACQAEY LRVPEADGTVVKVPGSSEDYDDATLASLLTISDVMSTGYHAAASADVKPGDTAVVMGDGA VGLCGVIAAKMRGATRIIAMSRHEDRAALAREFGATDIVPERDQAAVDKVLGMTGGYGAD AVLECVGSKQSFDTAIGLIRRGGVIGRVGLPHDVVISAEGTFYGNIGIKGGPAPVHHYDL DAGLLDAVLEGRINPGRVFTAEYDLDHIQDAYEAMDQRKVIKALIRL >gi|197324945|gb|DS990229.1| GENE 969 1022400 - 1023551 1333 383 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0902 NR:ns ## KEGG: BBIF_0902 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 383 15 397 397 646 95.0 0 MTNPSDFTPQPPQGSGPQPVQPTQPMPVQPAGNTVPPQTPGVIPIAPGTPSTPNTPDAPD VRNKKTSKLAVFAIIVAAVFLLITFIGVNSWGLLAFFALLPVLLSGFSVYTTRKDGKAQG RVLAWVAVGITVVALIVGGVDVVRNGLEAKASHDAAEQAAKEAAKAKCDAYSWPTTDLAS QLPKPESSKGKIEKDSSSAFYIKVCGTDATAYDNYVKALQEKGFTVDYFKSSSAFNAKNA AGYSVNIRYDSKGDSIMAILILAPDDSSTSSTSGNGATQNNDDSGSGDASTGSSSDADFK AAMDSYESLMNEYADFMEKYNAGGHPASMAADYAKIMVKYNDAMKKLDAIDENSLTPEEQ QYYIEVQTRVNQRLASVGASTAQ >gi|197324945|gb|DS990229.1| GENE 970 1023672 - 1023824 107 50 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140207|ref|ZP_07802400.1| ## NR: gi|313140207|ref|ZP_07802400.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 50 1 50 50 67 100.0 4e-10 MDDSGTGAVSHAAAPCSLVTVKRTGQSIDAPDGRSPGGPACEDIPGEGEA >gi|197324945|gb|DS990229.1| GENE 971 1023821 - 1024000 184 59 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283055|ref|ZP_03646377.1| ## NR: gi|224283055|ref|ZP_03646377.1| hypothetical protein BbifN4_04420 [Bifidobacterium bifidum NCIMB 41171] # 1 59 1 59 59 92 100.0 8e-18 MNVNDPAHLTDELPERLLASDDIETQRLLRLAGVSELYCRQRRSGGRRRLWTNGRPCTP >gi|197324945|gb|DS990229.1| GENE 972 1024154 - 1024465 418 103 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140208|ref|ZP_07802401.1| ## NR: gi|313140208|ref|ZP_07802401.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 92 27 118 129 165 100.0 1e-39 MRFVAVPRVEATYELPDMFVVVYDYVDGVTLDHYVGERDDDNGDGVYGSDVAISLILRDE KGNFVFWRSEYVRKPAKGESRAFSIQIYGLPKYASYEAYAYAS >gi|197324945|gb|DS990229.1| GENE 973 1024766 - 1027273 2683 835 aa, chain + ## HITS:1 COG:BH0714 KEGG:ns NR:ns ## COG: BH0714 COG0178 # Protein_GI_number: 15613277 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Bacillus halodurans # 13 834 5 818 820 456 34.0 1e-127 MQRIRDDARPESIEVRGARVHNLKNVDVDVPLGELVGVAGVSGSGKSSLALGVLYAEGSR RYLEALSTYTRRRLTQASRAQVDEVLHVPAALALHQRPAVPGIRSTFGTMTELLNSLRLL FSRLASHVCPHCGARNEPTLNVAAGLPIVCANCGKDFHAPGAESLAFNSAGACPACAGTG IVREVNRAALVPDESKSIDEGAVLPWGSLMWDLMKQVAGAMGVRTDVPFKDLTPKERDIV FNGPAVKKHILYKPKKGDDFAELDFTYFNAVYTVENALAKAKDEKGLKRVARFLEEKTCP DCGGTRLSEAARAPRVRGLNLAEASAMTLDAAVDWVRGVPGSLGADMRPMTTNICESFLD VARRLLELGLGYLALDRAGATLSTGERQRVQLARAVRNRTTGVLYVLDEPSIGLHPANVD GLLGVMRDLVADGNSVVVVDHDVRVLKACDHLIEMGPVAGAEGGHVIAQGTVGDVAANPR SRIAPFLADGESVRERGCMPVSHMFDLGHIRMTTSQLHTVKPLDVDIPRGRLVAVTGVSG SGKTTMVLESLIPALKARSAGEKPSEHVRSIDADGIERANLIDATPIGANVRSTVATYAD IHDDLRRAFARSDEAKAGGWKAGDFSYNTGRLRCPTCDGTGSISLDVQFLPDVDIECPDC RGSRYAPEADAIHRTTKDGRELTLPQLMAMSVDQALAVTVDMRKVHARLTTLHDLGLGYL TLGEPTPALSGGEAQRLKLASEMGRAQSHAVFVFDEPTIGLHPLDVRVLLGVFDRLVASG ATVVVIEHDLDVIANADWVIDMGPGGGESGGRIVAAGTPEQIAADANSITGRYLR >gi|197324945|gb|DS990229.1| GENE 974 1027401 - 1028705 1404 434 aa, chain + ## HITS:1 COG:MA2050 KEGG:ns NR:ns ## COG: MA2050 COG0534 # Protein_GI_number: 20090897 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Methanosarcina acetivorans str.C2A # 4 431 11 444 468 198 32.0 2e-50 MTGQPVKPLILRLCLPAVISNLVTTAYNLTDTFFIGQLGTAQSGAIGIAFSIMTVMQALG FFFGNGAGNSMSRELGKQNNERASRLLAVGFAGAVISGLTIAAIGLLTLRPLAVMLGSTP TIAPYAVQYLTPLLVAAPCVCGSFALNGLLRYQGQSAFGMIGLVSGALLNFLLAPLLIFV AGLGIFGAGLATAICQTVSFAILTTMSARFGVMKLSLRNCRPDVLLMREVAGGGLPSLIR QGAGSISVTCVNIAANPFGDAAIAGMAIVMRIMLGANSVIVGLGQGFQPVCGYNYGAGLY ARVKEGYWFCVRLATGVLVALAALLWMFAPQLVEIFRSDPAVVAVGVAALHIQCCTVILN GFNMMGNMMTQTMGRTGIASFLALCRQGLFLAPIVLVLPLAFGVLGVEMAQSVSDVLTFA VTIPFMRHILRELS >gi|197324945|gb|DS990229.1| GENE 975 1028864 - 1029574 1039 236 aa, chain + ## HITS:1 COG:SA0122 KEGG:ns NR:ns ## COG: SA0122 COG1028 # Protein_GI_number: 15925830 # Func_class: I Lipid transport and metabolism; Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) # Organism: Staphylococcus aureus N315 # 4 186 2 189 258 72 31.0 6e-13 MERTNGKRIAIVTGSALGLGYELTRQLIDRGWFVAGIDFNAERQTELAGEFPRGSYRGFV GDVSDEDFVKASVAEIAKIGHIDLLINNAGQPSFKTPTAYEAADVDKCLKGLKGMILWCV QTLKACDEQNLKIANVMSTAATRGNANESVYCATKWGEKGYTQSLKAAYKGSSVTVVGVY PGGIDTDFYRESHDYVSLDKQHTFMPAADLAGVMLDNLLSEARLTVSDILIERLYR >gi|197324945|gb|DS990229.1| GENE 976 1029577 - 1030293 773 238 aa, chain + ## HITS:1 COG:SA0565 KEGG:ns NR:ns ## COG: SA0565 COG2231 # Protein_GI_number: 15926286 # Func_class: L Replication, recombination and repair # Function: Uncharacterized protein related to Endonuclease III # Organism: Staphylococcus aureus N315 # 21 227 5 208 211 147 37.0 1e-35 MASARGNGRQSRRRPAAGDIESLYRALSAELSPTGWWPADTTFEIMVGAVLTQNTAWGNV DRSLAALKAESMLDPHALTVVEPERLQELIRPSGFYVNKSKTLRSLSRWYVERCDASPEG ADGITDAELRAELLGLFGIGGETADDMMLYVFSRRTFVADTYARRLFAFLGFDAPAGYPA FHKAYAPVVLDTGLDVADLQEFHGLIDEFGKAYRDDAAKNESFLQSWRPGEAAPRPTE >gi|197324945|gb|DS990229.1| GENE 977 1030340 - 1030864 736 174 aa, chain + ## HITS:1 COG:Rv0047c KEGG:ns NR:ns ## COG: Rv0047c COG1695 # Protein_GI_number: 15607189 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis H37Rv # 3 108 1 108 180 68 40.0 5e-12 MSLIEMMILGFLSERSMCGYELRKKMEQLQGYTRKFSDGAIYPATNRLVEAGLISEQASI RDGRQRRVFTLLDAGRAKLIDELKSTSGFNLTDFTRWTVVLTFLSVVPDKTDRDAVLRRR YELLNGHDVHFFYCDAGNPLSAEQIDDPYRKGIITVHDAQIAAELEWLRSMLEM >gi|197324945|gb|DS990229.1| GENE 978 1030871 - 1031866 1234 331 aa, chain + ## HITS:1 COG:CAC0366 KEGG:ns NR:ns ## COG: CAC0366 COG0679 # Protein_GI_number: 15893657 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Clostridium acetobutylicum # 10 327 6 296 301 72 19.0 1e-12 MGQFAIMVGQLVGFFIMLMVGYGCVRLRFYGQTALDGMCSLLLNVLIPLLVFSNAMAGAD RAQVEANWGAMLLTAVMYALLILVFRLVAWALRLKGSRSHVFQAALIFGNAGFIGIPIIM ALWPHEGAIYVALMSIVDQTLLWTYGVWLCEPVPEPGTVASPDAAGRPTLGLRVRNLLGR FVNPAFIGVMLALVLIMLGVRIPSIVLTPLRTIGGMATPMSLIYLGGLFALTKWWGVLKR YELYVGLVAKMIAFPLGLYALLTAAAGALPELPITHDMIMMITLVAGLPTMTTIAMFTAR RNNVPDYAVGFVLVSTLFSLLSLTIVSAVVF >gi|197324945|gb|DS990229.1| GENE 979 1031892 - 1032260 389 122 aa, chain - ## HITS:1 COG:MA0416 KEGG:ns NR:ns ## COG: MA0416 COG1917 # Protein_GI_number: 20089309 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanosarcina acetivorans str.C2A # 5 121 21 140 141 116 52.0 9e-27 MHREDAYAKYFIGQSYLAPLVSGKEVNVSNVTFEAGCRNNWHIHHKACQILIAVGGRGYY QEWGKEPVELNPVDVVYVAPETKHWHGAAPDSDFAHIAIMNAVDGASNEWLEPVEAEYDA LR >gi|197324945|gb|DS990229.1| GENE 980 1032365 - 1033510 706 381 aa, chain - ## HITS:1 COG:CC2770 KEGG:ns NR:ns ## COG: CC2770 COG3550 # Protein_GI_number: 16127002 # Func_class: R General function prediction only # Function: Uncharacterized protein related to capsule biosynthesis enzymes # Organism: Caulobacter vibrioides # 12 372 7 405 435 154 30.0 4e-37 MTPLLDVDRVRVLLAGNTVGMLTMSPSRTLAFAYDKTWLTHGFSISPISLPLRDGVFVAQ RDPLNGMFGVFDDSMPDGWGRLLTDRMLRQHGIDPYSVGPLARLSIVGHGGMGALEYEPA STIDDDMQSFPDLDSLAEECLNVLSADFSNDLDQLFVLGGSSGGARPKILTTINGEEWII KFPSSVDAPDIGEMEYHISNLARTCGIDMPETRLFPSRRCAGYFGVKRFDRIPLTNGEIG KVHMVSAGGLLETSHRIANLDYALLMRLTMRMTGGIKECERLYRLMCFNVFIGNRDDHAK NFSYLHDAESGAWSLSPAYDLTENPGINGEHTTAVNGKGRGITVEDMADIGMKAGIPRTR CISIARNMRERIADAGFTVRN >gi|197324945|gb|DS990229.1| GENE 981 1033507 - 1033806 250 99 aa, chain - ## HITS:1 COG:FN1997 KEGG:ns NR:ns ## COG: FN1997 COG1396 # Protein_GI_number: 19705293 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Fusobacterium nucleatum # 3 89 16 102 106 83 45.0 1e-16 MYDLLDEPLPGEVMAGIARRMTMRRKEHGMTQSDLARKSGVSLGSIRRFEQLHEISLNAL VGIAFALDCERDFDALFSQPYYRSIDDVVTATRHGKDIG >gi|197324945|gb|DS990229.1| GENE 982 1033828 - 1034106 313 92 aa, chain + ## HITS:1 COG:mll1606 KEGG:ns NR:ns ## COG: mll1606 COG4106 # Protein_GI_number: 13471589 # Func_class: R General function prediction only # Function: Trans-aconitate methyltransferase # Organism: Mesorhizobium loti # 36 90 33 87 256 73 56.0 6e-14 MKIYSNYYYIGSIHHVVSVLSGACRWPLPEDGGGVKRMLDIGCGPGNSTAVLRERYPHAE ILGVDSSPDMIEAARKAYPDIDFQLCDVSTHR >gi|197324945|gb|DS990229.1| GENE 983 1034112 - 1034309 169 65 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0915 NR:ns ## KEGG: BBIF_0915 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 65 4 68 68 108 96.0 5e-23 MTFIDAMLSLVVTQDVLPEAEGAQHAAQSSGLFGIGLGALTMIIGLWMLLRRRWAAVDSV LDSEQ >gi|197324945|gb|DS990229.1| GENE 984 1034410 - 1034985 679 191 aa, chain + ## HITS:1 COG:STM0869 KEGG:ns NR:ns ## COG: STM0869 COG3226 # Protein_GI_number: 16764231 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Salmonella typhimurium LT2 # 16 186 11 181 206 105 33.0 3e-23 MNAMIADMPSQSSRVDPERQQHIIDAALRVIASRGVAGTSHRVVAAEAHVPLGSMTYYFD GMHDLLHQAFDQFARASVLKFAARMQSASTVDEACDAIALSIERDMLGNQRDLNINLEFY TLAARDLSFRDISDRWMSATQKVMGRFFDSETTVLLDAMIEGLTLHRTLGGEPRNPQSIR DGIRRIIDHRR >gi|197324945|gb|DS990229.1| GENE 985 1035122 - 1035622 616 166 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0917 NR:ns ## KEGG: BBIF_0917 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 166 1 166 166 293 96.0 1e-78 MTNPNAPYAAQPQQSGFQPQPQFQSQQPYVPRPVAPLRTQRGLLKYVLLGLVTFSIYDIW QMSEVGDSLNLLAFKRDGKHTMHYCLMFFLVGWVTLGIGWLVWYHRVSGRIGEEQAARGL PVTVTASTFWLWGILGSLIAVGPFIYIYKLLHAMNDLSADYNVRGF >gi|197324945|gb|DS990229.1| GENE 986 1035676 - 1036599 1566 307 aa, chain - ## HITS:1 COG:SP0676 KEGG:ns NR:ns ## COG: SP0676 COG0583 # Protein_GI_number: 15900577 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Streptococcus pneumoniae TIGR4 # 1 294 21 314 322 309 50.0 6e-84 MTLLQLKYIVKIVECGSMNEASHELYVSQPALSSSVKELENELGIEIFTRSSQGIALTVD GAEFLTYARQVLDQADLLEERYKNAKPRKQLCSVSTQHYMFAVEAFVEMIDSIKSDEYEF TIRETRTKDIINQVANMLSEIGIIYLSDFNKDVIGKMLREKHLEFHPLFRAPLHVFISRN NPLAGKKKVTMDDLKPFPFIQYEQGEEGSFFFAEEAVWPEYSPKQINVTDRATILNFIIG LNGYTVCTGIDNGDLNNEKIVTVPLDTDETMLVGWVTNERAKLSKAAETYIEKLKSVVAD HGYKLID >gi|197324945|gb|DS990229.1| GENE 987 1036816 - 1037445 951 209 aa, chain - ## HITS:1 COG:STM4026 KEGG:ns NR:ns ## COG: STM4026 COG1011 # Protein_GI_number: 16767291 # Func_class: R General function prediction only # Function: Predicted hydrolase (HAD superfamily) # Organism: Salmonella typhimurium LT2 # 95 205 87 197 199 60 32.0 2e-09 MSNSPITDVIFDFCGVLLDWQTRACLTGHFPQDTVDAICAPDDPHGFFRYEDRMDAGEDF SHIYPDVVREQGEDIAPIFAYYIEHYGDALPRMLPGMEDLLRDLKRHGYGVWGLTNWSHE TIHIAFEKFPQIGELLQDTVVSGIEKMHKPNADIYELALQRFGLEAGHCVFFDDTAKNIV GANEVGIHGLLFDNALQARESLASLGVRL >gi|197324945|gb|DS990229.1| GENE 988 1037606 - 1039402 1775 598 aa, chain - ## HITS:1 COG:Rv3433c_2 KEGG:ns NR:ns ## COG: Rv3433c_2 COG0063 # Protein_GI_number: 15610569 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Mycobacterium tuberculosis H37Rv # 247 524 5 239 289 90 36.0 9e-18 MPGQTDENRLHVLRHAAFTARDVREMERPLLENGVPLMRMASAATAHVVAEMIEDEGVAL EESNIVLLAGSGDNGGDGLFAATMLASNGASVTAVAVGRTLHGEGFAAFVRAGGKVLILD PASEIPGCAAGFSAGEAGERLRAAVELAQHAHVIIDAMTGIGLSGALHGIAGTVASSLGV DGTIPDRTALPAGDSTGEFPLVVAVDVPSGVGVDDGAITGPYIPADVTVTFGALKPCLML PPAAYACGRVTLVDFSFDIDGHMPFVEAVSGDNAAETVRLPRLADTKYLRGVTGLITGSE RYPGAAVLSCKAAAKTNIGMIRYMGPQVCRDMVLAAVPEAVLGKGRVQAWVVGSGVPTGE TEDDDFQRETIAKLLTHYALSSDDDPDDDDDLAYDMPPLVVDAGALDLLPDEVPPQVVIT PHAGELASLLTARGEDVDASDVQNEPLHWALRAHELTGATVLLKGAVTIVVGEPADTDRE SDAQGGFADDEQHVRVVVSGRAPAWLGTAGAGDVLAGMLGALLAQQDDEDVSAPDVAACA AYLHGYAAAQASQSDQRGFTPPTIYGSDDRHLRTKLGHPIVASDVIGMIPATFAELLS >gi|197324945|gb|DS990229.1| GENE 989 1039705 - 1040466 912 253 aa, chain + ## HITS:1 COG:MA0409 KEGG:ns NR:ns ## COG: MA0409 COG0599 # Protein_GI_number: 20089302 # Func_class: S Function unknown # Function: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit # Organism: Methanosarcina acetivorans str.C2A # 4 246 5 244 250 251 48.0 8e-67 MFDELKSRMNKFWNDDRTLAQTDPEFIELFSNFAYDEVVNEPGANHPDLDDATRSMAILA ALIGCQGLDDFELMVPVAFESGVGAVQVKEIVYQAVAYLGFGRVLPFLKKTNEILEAKNI HLPLEPQSTTTPETRAEAGEQAQIDIFGERMRGFAQSGPEKTRHLNKWLAGNCFGDYYTR GGLDTRRREMITLCFLAAQGGCEPQLTSHAAANMRVGNDERFLIAVVSQCTPYIGYPRTL NALRCIADAAAKA >gi|197324945|gb|DS990229.1| GENE 990 1040510 - 1041001 552 163 aa, chain - ## HITS:1 COG:Cgl0512 KEGG:ns NR:ns ## COG: Cgl0512 COG0656 # Protein_GI_number: 19551762 # Func_class: R General function prediction only # Function: Aldo/keto reductases, related to diketogulonate reductase # Organism: Corynebacterium glutamicum # 2 152 47 197 269 186 58.0 1e-47 MVGKAIRESEVPREDIIVASKLPGRHHQYDQARVTIEESVARMGLDYIDLYLIHWPNPSQ GQFVEAWQALVDAQKQGIVKHIGVSNFLPGHIDLLIRSTGVTPAVNQVELYPFFQQAGQR AYDQAHGIITEAWSPLGHANQMLKDPTIVRIAAMDNPEGRSFA >gi|197324945|gb|DS990229.1| GENE 991 1041189 - 1041389 64 66 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRDEPPPTRMSATAIRRSRLPAPKVPAPTFNPATHQSAQDVTAYPGHTFWPITRFYRAS LPPLAG >gi|197324945|gb|DS990229.1| GENE 992 1041592 - 1041789 175 65 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTSITQNKRVATRVIPDYHLAIGRHQLHRRHGPSKSYPSSICAYHCSAAASRPTPDTPVM DTSAG >gi|197324945|gb|DS990229.1| GENE 993 1041826 - 1043292 1891 488 aa, chain + ## HITS:1 COG:SPCC1322.04 KEGG:ns NR:ns ## COG: SPCC1322.04 COG4284 # Protein_GI_number: 19075632 # Func_class: G Carbohydrate transport and metabolism # Function: UDP-glucose pyrophosphorylase # Organism: Schizosaccharomyces pombe # 86 474 109 489 506 220 36.0 6e-57 MFAEDLKRTEKMTVDDVFEQSAQKMREQGMSEIAISQFRHAYHVWASEKESAWIREDAVE PLRGVRSFHDVYKTIDHDKAVHAFAKTAFLKLNGGLGTSMGLQCAKSLLPVRRHKARQMR FLDIILGQVLTARTRLNVPLPVTFMNSFRTSDDTMKALRHQRKFKQTDIPLEIIQHQEPK IDAATGAPASWPANPDLEWCPPGHGDLFSTLRESGLLDTLLEHGFEYLFISNSDNLGARP SRTLAQYFEDTGAPFMVEIANRTYADRKGGHIVRDTATGRLILREMSQVHPDDKDAAQDI AKHPYFNTNNIWVRIDVLRDMLAEHDGVLPLPVIINNKTVDPTDPQSPAVVQLETAMGAA IGLFEGAICVQVDRMRFLPVKTTNDLFIMRSDRFHLTDSYEMEDGNYIFPNVDLDPRYYK NIEDFNERFPYNVPSLAAANSVSIKGDWTFGRDVIMFADARLEDRNEPSYVPNGEYVGPM GIEPGDWV >gi|197324945|gb|DS990229.1| GENE 994 1043430 - 1045367 2136 645 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0977 NR:ns ## KEGG: BBPR_0977 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 645 1 645 645 1207 99.0 0 MAEGSNGRRRFSDKWGKHELDVLAVLSSAFPQWLTSRQIAQRVKAYADSYGELADQAAKA AFAKQFQRDRAKLAAMGIAIESRQPEYSSKSEGQDFASYRLQLGDEPRIRLRFEQEDLPV LAAANYLARSISVSSTQSQTVTPQHVSRTTPRVPQTPIPGLGLDSIAPGLGTQTIPPALV RVVDSRRFAATVDVDGENINVAYTDSDDLAMFVLEHPGAVIVSPQEAVDAFNRRLQAASN MMLADRSSDDTGSATVATPTITSTTLEPEDADPKKNHQKKSGTSFQTGSEVDRRLRLMLF LSAHLGEEFSLAELAERFIGRPKSDDELKKYVNVIHKDINTLTTVSDDGEMAGSQFFDID WSLLDAEGIVSATNSLGLERLAGISPQYLSMLTASVSYLAHSPLLPEAQRTQAASLYQRL RQLVKPGETPWLSLTGYELEPHCFSVVKRAISTESLLDMEYTDGAGRTRRKVVAPSKIFV DEGVYYAAVWTDVLDSTPEDRRKFVSRDQLINKANGKPRTWQVLRLARIEHAEVIAPVKR VDIPDMPVSELRKWSFDNGTPAVFITDQPDLPFIKSMPGATVEPCSPGEKVHIIVSSDSW FVAFCIAHARHITAVAPETLRTMIVARAQRELSLGTREEDTPEEE >gi|197324945|gb|DS990229.1| GENE 995 1045372 - 1045698 266 108 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0978 NR:ns ## KEGG: BBPR_0978 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 108 1 108 108 199 99.0 3e-50 MPWWIWLILSLFMLAMIVAGIAYAALHGFRALNGIAEIGSRLGKPLSELADVPQGADARE PLAPPTFTQPLNSAISRYDDAQVDVIRHRNAKRERHARAWARWSRFNR >gi|197324945|gb|DS990229.1| GENE 996 1045807 - 1048365 2684 852 aa, chain + ## HITS:1 COG:MT2153 KEGG:ns NR:ns ## COG: MT2153 COG4581 # Protein_GI_number: 15841583 # Func_class: L Replication, recombination and repair # Function: Superfamily II RNA helicase # Organism: Mycobacterium tuberculosis CDC1551 # 38 586 9 546 906 489 50.0 1e-137 MVKHQRNHSAADRPGPSPSQRYAAFQKRQAHNASVAARFAATLPFDLDDFQQDAIDALER GENVLVAAPTGAGKTVVADFAMYLARERNVKAFYTTPIKALSNQKYHDLTAVYGADRVGL LTGDISINSEADIVVMTTEVLRNMLYEHSTTLNALRFVILDEVHYLADRFRGPVWEEVII HLPRQVSVIGLSATVSNVEDFSSWISSVRGDTKLVVSERRPVPLEQHVLVQADDHTEPEL LDLYRRDAQGEQTTKLNARLIDRLDQLDRQAARRRGAEDSRSRGRGHSRGHVPAQRHTPK RWAVVDELNYLDMLPGIYFIFSRNGCDQAVEQCINAGLELTTEDEMRRIRAIVDEMVAGQ LSQEDLKALQFSRFRFALEEGFASHHAGMVALFRQIVERLFEEGLVKMVFATETLALGIN MPARCVIVEKLEKFNGSGHVPLTPGEFTQLTGRAGRRGIDTIGHAIVVDHRDFVPATAAA LSSKRVYPLHSSFHATFNMAVNLLNTSDYETTRATLDHSFAQWEANESAWQLESQLTTLK QALDGYEQAFHCEYGDFASLMRIRMELSDLEKNGRRKLKQTAFPTDEQRKNTFRELDQSI ETLKKRDREHPCRQCPDMQQHMKWGHRWIREMREYERVQHRYESRTGSVARQFDRICSIL EQLGYVKRDGTDMRLSEQGQLLRHIYSEQDIVLAEALERGMFDHLTARQLAAVLSALVFE ARGGTGGEPRRWPGGIQGPVAQTSQSLDRLHAQLTMLCEDEGLDDLQQLDFGIVDIMYDW ASGNSLAYVLHDRDMTGGDFVRNAKRLSDILQQISAAEPYLPQGSAHLAQVAHKAMELVN RGIVAYSGIGEG >gi|197324945|gb|DS990229.1| GENE 997 1048489 - 1048836 528 115 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0928 NR:ns ## KEGG: BBIF_0928 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 115 1 115 115 216 100.0 2e-55 MAERSLRGMSIGAKSLESDDNVDFAARSEVAYICPKGHRTILPFAEGAEIPDEWECRCGT IAHREGDGDEEANEIAKPTRTHWDMLLERRSEDELKKLLDKRLEMHHSGWIPDYE >gi|197324945|gb|DS990229.1| GENE 998 1048847 - 1049581 754 244 aa, chain + ## HITS:1 COG:CAC0418 KEGG:ns NR:ns ## COG: CAC0418 COG0546 # Protein_GI_number: 15893709 # Func_class: R General function prediction only # Function: Predicted phosphatases # Organism: Clostridium acetobutylicum # 13 234 3 208 216 130 34.0 2e-30 MSQHQVTTRQRRNVVLLDLDGTLTQSDPGIIACATKAFEELSLPVPDDQEMHRFIGPAII ESFRRNHMPDELLDRGVEIYREYYADKAVFDDPNNPGHKIPGRLYNSVYAGIPEQLAALR ADGLHLAIATCKPQYQAEPVCEHFHLDTMVDGIYGASTDNSRIDKDQVIRYCFDSIGFDA DAGDRALMVGDRWTDVDGAIACGLDCLGCRWGYAEAGELEEHGAYRIIDTVDELAAAVND YFAK >gi|197324945|gb|DS990229.1| GENE 999 1049613 - 1050149 218 178 aa, chain - ## HITS:1 COG:no KEGG:BBPR_0983 NR:ns ## KEGG: BBPR_0983 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 162 53 214 214 290 93.0 1e-77 MRPTPDLPDRDPRNVLTDTWRVVPDDRLVTFEPGGLPKSWRISAVRRNAANLSLVVNDPV TGEPVEPDLMALLRDGCFDFDRSRETPEWQGFWRSERGTVAYHDASGLVRRWTPGMMKPA HGKGNANRGRGPLHPHSQLSYTGLATFGRLRSKPLINMASHRWNKAIPEARSNHCRTA >gi|197324945|gb|DS990229.1| GENE 1000 1052812 - 1052898 70 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSKELETIALWRDGGGGLWMGWDRPERP >gi|197324945|gb|DS990229.1| GENE 1001 1053020 - 1053256 98 78 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283082|ref|ZP_03646404.1| ## NR: gi|224283082|ref|ZP_03646404.1| hypothetical protein BbifN4_04559 [Bifidobacterium bifidum NCIMB 41171] # 1 78 16 93 93 133 100.0 5e-30 MSSLTKVSSTTRARHRAWIRRHARGVWRAAIEAGAYRTERFVALAMVQWPGPSIYPAMSC AEMLKSEEPGELKGAERK >gi|197324945|gb|DS990229.1| GENE 1002 1053406 - 1053891 342 161 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0931 NR:ns ## KEGG: BBIF_0931 # Name: not_defined # Def: hypothetical protein with helix-turn-helix motif # Organism: B.bifidum # Pathway: not_defined # 1 161 1 161 161 326 99.0 2e-88 MSIGQVIKVVREERGLTQSQFAHELFVTQQALSRWEKGTAEPSIDMIRLISTRFEVPMPR LMEMPDNGFCQSCAMPFYRPEDHGTEPDGTRSGDYCNYCYDDGVFLQDYANSDELVAACA PMMAESCHISVEQAEDCMSALLPNLKRWRHQDEIDAVAEGE >gi|197324945|gb|DS990229.1| GENE 1003 1053895 - 1054545 826 216 aa, chain + ## HITS:1 COG:lin2189 KEGG:ns NR:ns ## COG: lin2189 COG4832 # Protein_GI_number: 16801254 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 4 212 7 207 208 179 45.0 4e-45 MAFDYKKEYKDLYQPKTMPAIVMVPAMRFVAVDGVGDPNEEGGDYAKAMQLLYGISFTVK MSKKSKNPDEHIDGYFDYTVPPLEGLWSMGEGVPGVDYAHKADFHWTSMIRLPEFVTDKV FAWAKASFAAKHPESDVNRAYLFDFDEGVVAQVMHKGPYDDEPATVAILDDYARSQGYEL DLSDARRHHEIYISDPRRAKPENLKTVIRHPVVKVG >gi|197324945|gb|DS990229.1| GENE 1004 1054570 - 1054845 273 91 aa, chain - ## HITS:1 COG:no KEGG:BBMN68_435 NR:ns ## KEGG: BBMN68_435 # Name: not_defined # Def: phage integrase family protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 23 84 1 62 393 109 95.0 4e-23 MPLGGPLWLRIWLRISHDGRPTMAMGGGGSTYKSADGIWHAAIDIEPDRATGRRRRLTAQ GKTKAVANVRLRMKLDAYVRKGGTRPRWSAR >gi|197324945|gb|DS990229.1| GENE 1005 1055000 - 1055329 169 109 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0934 NR:ns ## KEGG: BBIF_0934 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 14 109 5 101 101 142 93.0 7e-33 MFHDPELSVWNVMGSSPNKVSPCTSLSSLPNLTSTTGMLTVCLLVMMHEKSSNAFMGARL LMDRAHEYDRLDEAFLADLRLILIATYLKNTAKICTKISLSGESPIITS >gi|197324945|gb|DS990229.1| GENE 1006 1055163 - 1055453 284 96 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0988 NR:ns ## KEGG: BBPR_0988 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 96 29 124 124 189 97.0 3e-47 MNAFDDFSCIITSKQTVNMPVVEVKFGNDDNEVQGDTLLGELPITFQTDSSGSWNIELDA TKLTPDALGTNAFIVIYNTCSGERTARYRYGLGFAI >gi|197324945|gb|DS990229.1| GENE 1007 1055504 - 1055881 455 125 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0935 NR:ns ## KEGG: BBIF_0935 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 125 1 125 125 225 98.0 4e-58 MDELLPLLLWVFAVVWMLSVCGICIVRSRFGTGERHPEVNPVSWNVVLAQMVSVLFAGIP FMVYLMASEELSPAFHDFYTDHLVIGAAIVIALVFVELLLMGIQAHRAHLTEVDRVVRGA THTEA >gi|197324945|gb|DS990229.1| GENE 1008 1055896 - 1056570 727 224 aa, chain - ## HITS:1 COG:MT1879 KEGG:ns NR:ns ## COG: MT1879 COG0789 # Protein_GI_number: 15841300 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 25 212 43 220 225 140 41.0 3e-33 MAEQTGSQMAGLHLVVPLEQRLDLGASDAVQGELFVDEGARRPTRGYRGTVASKVAGITY RQLDYWARKQIVEPSITPSHGSGSRRLYSFKDVVILAVSKKLLDAGVNLQNVTTAIGFLM QRDVDQLEHVTIMCDGEEVHECTTSDQMIALLQSGKAVFGVSVGSLWHQIHDALETEDYV DLQSSSANVGSAGSGRVAGRPIDELTAMRMRRKIAAQRAAREAA >gi|197324945|gb|DS990229.1| GENE 1009 1056665 - 1057102 484 145 aa, chain - ## HITS:1 COG:MT1875 KEGG:ns NR:ns ## COG: MT1875 COG1716 # Protein_GI_number: 15841297 # Func_class: T Signal transduction mechanisms # Function: FOG: FHA domain # Organism: Mycobacterium tuberculosis CDC1551 # 32 139 41 148 162 108 54.0 4e-24 MTDPIPSAGETTIIGLPAIQIPITTTGDRPLTQEDIETIARLAPGTALLISTRGAVSGSR YLLDEDEVTVGRDSRADILLDDSTVSRSHAVFRRVGDTFAVYDSGSLNGTYVNRQRVDHQ QLRNGDEIMIGKFRLVFFTKSAVIA >gi|197324945|gb|DS990229.1| GENE 1010 1057108 - 1057929 954 273 aa, chain - ## HITS:1 COG:MT1873 KEGG:ns NR:ns ## COG: MT1873 COG3879 # Protein_GI_number: 15841295 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 3 273 28 292 292 101 30.0 2e-21 MVAHKSSRDVLSQLHEQHAQDKKNDRMETGSFPVVRKKPKRPVKDGSARMRLMTSVLILI MCALLGYGYMIQINNADATYETLSEDELTRLISETGTQVQNLEQRKSELTNQLESLKAAA NKTQEAERIAKQNEETNGILAGRLPATGKGVSISISQGSKTKIDAATMYKLIEELRNAGA EVMAINSVRVVTKTYVSDTDDGLECDGVALRAPYRILAIGDPQNLQNAVNIAGGVGSSLK VKYGATVSVTSSDSITISQIRKSTDNTYARAVE >gi|197324945|gb|DS990229.1| GENE 1011 1057936 - 1058268 547 110 aa, chain - ## HITS:1 COG:MT1872 KEGG:ns NR:ns ## COG: MT1872 COG3856 # Protein_GI_number: 15841294 # Func_class: S Function unknown # Function: Uncharacterized conserved protein (small basic protein) # Organism: Mycobacterium tuberculosis CDC1551 # 1 108 12 119 121 96 58.0 1e-20 MAAVLGLIIGVVLGVFVKPDIPIILQPYLPIMVVAALDALLGAARAYFERSFSDKVFVIS FISNVVTATLLVFLGNQLGVGSQLQTAVIVVLGIRIFSNVSAIRRFIFRG >gi|197324945|gb|DS990229.1| GENE 1012 1058269 - 1059240 1193 323 aa, chain - ## HITS:1 COG:MT1871 KEGG:ns NR:ns ## COG: MT1871 COG3879 # Protein_GI_number: 15841293 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 120 321 100 306 309 79 31.0 6e-15 MDADPIKPLSFPVPAENAPVKRRAVFSDSVAQSQSRHVRPAEGGQTMPARRRRLHDDSLK LIDDLTNRPMDPLFSDSRLDQRPRSRLSTWATKFLVFAMCIAVGFYGSLFIERLHSDPRK VVRQSLASELRETRGQADTLMNEVNDLRNQVTERSKKLGGTGEDSTLVNDEMVNGLVAVE GPGISLTLADPIAAGSDGASTPRESSGMQIRVVTDADLRLLVRLLWQAGAEGIAINGNRL GVQTSVRKAGSNILVGVTAVTSPYTIQAIGDRDTLASAVSKSTQRSLYDSFAQAGIYPQV NKESSITLEAAPSGELSYAKRSE >gi|197324945|gb|DS990229.1| GENE 1013 1059230 - 1059883 703 217 aa, chain - ## HITS:1 COG:MT1870 KEGG:ns NR:ns ## COG: MT1870 COG0558 # Protein_GI_number: 15841292 # Func_class: I Lipid transport and metabolism # Function: Phosphatidylglycerophosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 32 217 11 196 209 97 34.0 2e-20 MGTQQHADGGYRQKIKQKFNQEYSPEPRDIYFTVPNLISVLRIASIPFIAWLVADHRMVP ALIVLAVSAITDSLDGIIARAFNQVSKIGQILDPIADRLLIICSVLALGVAGIIPWWMII IIAARDAWMMLLVLWLAQYDYGPLPVHFVGKAGTFMLMVSIVALIFCDIWVNPFVGLLHL AALAAGIWGVGLYWLAGCIYSKQGISLLVKEKRADGR >gi|197324945|gb|DS990229.1| GENE 1014 1059900 - 1060751 1229 283 aa, chain - ## HITS:1 COG:MT2181 KEGG:ns NR:ns ## COG: MT2181 COG0040 # Protein_GI_number: 15841613 # Func_class: E Amino acid transport and metabolism # Function: ATP phosphoribosyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 1 282 1 283 284 274 50.0 2e-73 MLRIAVPNKGMLSEPAWNMLSEAGYRLRSNPRQLVVEDPDNDIELFYLRPLDIAVYVGRG TIDVGITGHDLLLNSGTEASEHMELGFGASTFRFAAPNDSDFHTLQDIQGKRVGTSFDKL VHDYLVAHGIEAETIHLDGAVESSVQLGVADLIADVVSTGTTLRNAGLRIFADPIMHSEA VLIRSPRLDPEDERLTILSRRLQGVLTAQRYVLMDYDIPVGKVAAAVAVTPGFESPTVSP LHDKQWNAVRVMVPKAKVNQLMDKLYEVGARAIIVTALQASRM >gi|197324945|gb|DS990229.1| GENE 1015 1060786 - 1061049 568 87 aa, chain - ## HITS:1 COG:MT2182 KEGG:ns NR:ns ## COG: MT2182 COG0140 # Protein_GI_number: 15841614 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-ATP pyrophosphohydrolase # Organism: Mycobacterium tuberculosis CDC1551 # 1 87 7 93 93 96 57.0 1e-20 MKTFESLFAELSEKAVTKPEGSLTVDELAKGTHFIGKKIIEEAGETWIAAEYEGADRTAE EMSQLLYHLQVMMIAKGITLEDVYKHL >gi|197324945|gb|DS990229.1| GENE 1016 1061161 - 1061826 902 221 aa, chain - ## HITS:1 COG:Cgl1560 KEGG:ns NR:ns ## COG: Cgl1560 COG0036 # Protein_GI_number: 19552810 # Func_class: G Carbohydrate transport and metabolism # Function: Pentose-5-phosphate-3-epimerase # Organism: Corynebacterium glutamicum # 5 212 8 215 219 215 51.0 5e-56 MSIQIAPSILSADFCNLERDLKAIANADLVHVDVMDHHFVPNLTLGEPIVKRICEVTDLP VDVHLMIEDPDRWAPEYAKLGAASISFHMGATHAPVRLARQLRDMGCKACFAVRPAEPVE PIFDILDEFDMVLIMTVEPGFGGQKFLDNQMAKVRRLRDEITRRGLSTHIQVDGGVSPKT AHIVAEAGADVLVAGSAVYGAESPAQAIDQIRDKAAAAYRD >gi|197324945|gb|DS990229.1| GENE 1017 1061954 - 1062946 1233 330 aa, chain - ## HITS:1 COG:Cgl2037 KEGG:ns NR:ns ## COG: Cgl2037 COG0682 # Protein_GI_number: 19553287 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Prolipoprotein diacylglyceryltransferase # Organism: Corynebacterium glutamicum # 1 278 1 276 316 225 42.0 9e-59 MNLAYIPSPGFSKFSIGPVTIHMYAICILTGIIFAVWILTVRWKKNGGTFDQVLDTTLVA VPCGLVGARLYHCITTPDIYFPPTGNLINILKVWEGGMAIFGGIGVGALAAFLWCRHRRY PFALLADCIAPALMVAQAIGRLGNWFNQELYGMPTTLPWGLKLNDADAIGKSEICYNGQA CPTGTLFHPTFLYEMIWNLIGAAIIVWLGHKLVDVLKSGQQFAMYMMWYGLGRTWIESIR INYSTIILGLRVNVWTAIIVFLAGCILFVVLWRFGSETRDLTSRLRAVTADEMERQRQLE ERAAAKSGKMAKTAKPETPAETAESEIHQD >gi|197324945|gb|DS990229.1| GENE 1018 1062864 - 1063052 145 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQIAYMWIVTGPMENLENPGEGIYARFMQCLVCLDRCYRHLPYPMAGGCTVKAARRHGGV SA >gi|197324945|gb|DS990229.1| GENE 1019 1063044 - 1063916 367 290 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|149916131|ref|ZP_01904653.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter sp. AzwK-3b] # 23 258 5 242 263 145 36 4e-33 MTNTATTPSGQPLGISHKPSATEAMFDRLKAENKPAFIGYLPYGFPNPDISLDALRIMVE HGVDAVEIGLPYSDPVMDGPVIQAASQIALNNGESINGVFKAVETVANAGGVPLIMSYWN LIYHYGVERFACDFENAGGAGLITPDLIPDEAGEWIEASDRHGLDRIFLVSPDSASERLE LVARNARGFVYAASRMGVTGERDTISASPETLVERARNAGARNVCVGIGVSTPEQGAKVG AYADGVIVGSALVHTLLDDDNVTAKTPKEGLRDLAAKVEALSEGIHNESR >gi|197324945|gb|DS990229.1| GENE 1020 1063949 - 1066036 2515 695 aa, chain - ## HITS:1 COG:MT1647 KEGG:ns NR:ns ## COG: MT1647 COG0133 # Protein_GI_number: 15841065 # Func_class: E Amino acid transport and metabolism # Function: Tryptophan synthase beta chain # Organism: Mycobacterium tuberculosis CDC1551 # 282 679 37 422 422 463 62.0 1e-130 MSVLDELVAGALEDQRSRECVVSLEDVRRAALAAPAPIDATRWLKRPDGIPVIAEIKRAS PSKGHLSDIPDPAALAREYERGGASAISVLTEGRRFLGSLDDFDKVRSAVHIPLLRKDFI VTDYQICEARAHGADLVLLIVAALDDDKLAHLLELAHELGMAVLVETHTTEEIRRAVAAG ARIIGINARNLKNLKVDVNKYAELAEGLPDDVIRVAESGVFGSVEVEDYGRAGADAVLVG EGVATADDHVAAVQRLVKAGQRVKASESTPLSEHQGPYWGQFGGRYVPEALITALDELER IYDQAKADPEFRKEFMTLQQRYVGRPSPLTEAPRFAALVKDRTGLDARIFLKREDLNHTG AHKINNALGQALLVKRMGKTRVIAETGAGQHGVATATVCAMLGLKCRVYMGQIDARRQAL NVARMRMLGAEVVEVTLGDKILKDAINEALRDWVTNVADTHYLLGTVAGPHPFPAMVRDF QKIIGEEAKQQLQDWYGIDHPDAVCACVGGGSNAIGVMNAFLDDERVNLYGYEAGGNGPS SGHHAIRFAPGTGQLGMFQGAKSYLLETDEGQTLDTYSISAGLDYASVGPEHAWLKEIGR VNYSWATDEEAMNAFRDLSQTEGIIPAIESSHAVAGAFKAAADLKAKGYDKAVMIVNISG RGDKDMATAGKWFGYLTDEQAAALDVTGAQGDTVA >gi|197324945|gb|DS990229.1| GENE 1021 1066235 - 1068370 2710 711 aa, chain - ## HITS:1 COG:MT1753 KEGG:ns NR:ns ## COG: MT1753 COG1160 # Protein_GI_number: 15841173 # Func_class: R General function prediction only # Function: Predicted GTPases # Organism: Mycobacterium tuberculosis CDC1551 # 245 711 11 461 463 468 56.0 1e-131 MIRVAIDGPAGVGKSSTSKALARHFGFAYLDTGAMYRACAWWCLHQGIDLDGDQVDEQQI TEAVAEFFTGDHFDIGVDPDHPSITADGEDISEAIRSSEVSSHVSKVSNVIPVRHVLIAA QRAYIARESAADSFSLGRGIVAEGRDVTTVVAPDAEVRVLLTAREEVRQARRTGQAVAGA GVGGEDVAARDRADSKVTSFLTAADGVTTVDNSDMDFQQTLDVLITLVADAVEVQEYEQY AANLSDYELDEGDEQIIAGSRYGIEDESPAPKAVGVLAVVGRPNVGKSTLVNRILGRRAA VVEDTPGVTRDRVSYDAEWSGTEFKLVDTGGWEADVEGIESAIASQAQIAVQLSDAVILV VDGHVGLTDTDERIVKMLRASGKPVTLAVNKVDDGASEYLTAEFWKLGMGEPYGISAMHG RGVGDLLDAALDSLRKADKTSGFLTPTHLRRVALVGRPNVGKSSLLNQLAGEQRAVVNDL AGTTRDPVDETIDIDGEDWLFIDTAGIKRRLHKVSGADYYSSLRTQAAIERSELALVLFD SSQPISDQDLKVMSQAVDAGRAVVLVFNKWDLMDDFGRQRLERLWKTEFNRVTWAQRVNL SAKTGWHTNRLADAMRNALESWDKRIPTGRLNAFLGQIQAAHPHPLRGGKQPRILFATQA STRPPRFVIFATGFLEHGYRRFLERSLREEFGFEGTPIQISVNIREKKRRK >gi|197324945|gb|DS990229.1| GENE 1022 1068367 - 1069143 953 258 aa, chain - ## HITS:1 COG:MT1751.1 KEGG:ns NR:ns ## COG: MT1751.1 COG1187 # Protein_GI_number: 15841171 # Func_class: J Translation, ribosomal structure and biogenesis # Function: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases # Organism: Mycobacterium tuberculosis CDC1551 # 19 258 13 254 254 234 52.0 1e-61 MPNAYSRALKAHDDNNNEGIRLQKILAQAGFGSRRKCEQMITDGRVEVDGELVTELGTRV DPKKQHIRVDGSRVHLNPNHVTLALNKPKKVLSAMDDPKGRYTLADIIGDKYERVFHMGR LDYDSEGLILMTNDGELSQHVMHPKYEVEKTYIATIDGKIGGNVCRRLVTQGVQLDDGLV KLDHCAIIDANRDQTIVKVVLHSGKNRIVRRIFGAIGYPVRRLVRTQIGPIKLGDLKSGT YRVLSQVEVRSLQKEVGL >gi|197324945|gb|DS990229.1| GENE 1023 1069131 - 1069313 89 60 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRLASFSQRGRTLTMNLRSRTNSQGKHSQYIVSYRPPVGKLATFGGSQSPQHQKKDTTTS >gi|197324945|gb|DS990229.1| GENE 1024 1069310 - 1070215 1062 301 aa, chain + ## HITS:1 COG:SP1778 KEGG:ns NR:ns ## COG: SP1778 COG0580 # Protein_GI_number: 15901607 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) # Organism: Streptococcus pneumoniae TIGR4 # 17 249 3 213 222 77 29.0 4e-14 MTEEQNTEPSAYPIGARVCAELAGSFLVCFAIYMICTFGTSIYGLDLAYIVVGTALAYAV VTAMLGRVSGGQFNPAITVAAILTGKTKVVAGILYVIVQVVGAIAAAGAVRWILPTSQTV TMKTWLTPAVNGYGTGSVSSATTSSASVSFGISMAIVVEVIAAIIIIAVAMRHTDANGKP NATYAPVIGAAYGLGVAMTYTVTGAALNPARATGIALFGQNQGLSTQPLQQLWIFWLAPV LAAAIVALVMIIADMASKRKPKTPADAPIDEATDAEADAHDIAVDAAVNAAPQVPSTNPE Q >gi|197324945|gb|DS990229.1| GENE 1025 1070195 - 1070488 292 97 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0951 NR:ns ## KEGG: BBIF_0951 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 97 1 97 97 144 100.0 8e-34 MNQHHPYVSEVHEGKPAFEWCVLGVVIVALVVAFLGYTMAATVIIAVTAIVTALLRIIMR EKSPWKVRSVLFDAIIGIGLGLGLLLLYFAPSLFWIR >gi|197324945|gb|DS990229.1| GENE 1026 1070581 - 1072212 2427 543 aa, chain - ## HITS:1 COG:MT0984 KEGG:ns NR:ns ## COG: MT0984 COG0138 # Protein_GI_number: 15840381 # Func_class: F Nucleotide transport and metabolism # Function: AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) # Organism: Mycobacterium tuberculosis CDC1551 # 6 543 8 523 523 558 58.0 1e-159 MTNTNRPIRRALVSVFHKEGIEVLAEAFIKAGTEVVSTGSTAKRLAELGVAVTEVSEVTG FPECLDGRVKTLDPHIHAGILADMTNPDHAAQLEKFGIKPFDLVVVNLYPFADTVRSGAD EAAVIEKIDIGGPSMVRGAAKNSATVAIVTDPADYALVAARVANGEGFSLEERRWLAGKA FAHTAAYDATINEWTAKHWPKPATVESADPAEGENPVNEAKFPAAFTRTWDRAHTLRYGE NSHQQAALYLDPLDRDGFAHAEQLGGKPMSYNNYVDADAAWRAVWDMAPAIAVAVVKHNN PCGLAIGATAAEAHKKAHACDPVSAYGGVIACNTTVTLEMAESVRPIFTEVIVAPAYEDA ALELLKTKKKNLRILKVAEPPKGHTQFRQIDGGLLVQDMDLINATGDDPDAWKLVAGEPA DEATLKDLVFAWHAIRCVKSNAILLAHDQATVGIGMGQVNRVDSCHLAVDRANTLADGAD RATGSVAASDAFFPFADGAETLMNAGVKAIVQPGGSIRDEEVIEAAKKAGVTMYLTGTRH FFH >gi|197324945|gb|DS990229.1| GENE 1027 1072160 - 1073521 1115 453 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1007 NR:ns ## KEGG: BBPR_1007 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 453 1 453 453 782 99.0 0 MRKRIQAWLRGPIIAIGSMALYAIALGCFLALMLLVISMEEGGENLSSSTLDMTRIVVLL SQGIGFETDSLSLSIMPLLLTVLLIGLVWSFSRKICTDIRAYVSGVVVWIFINVMGTQSL PVGLLDWPALVCVKSAVVFSLGFAGAALSKGPFSGQLRELIRHHVSDGVRRTIRTGLMVG VIMMGVYLVMGLITVIVWGVLNRSAMDSLFADIGMGTGSRILTTIASLAWLPNLCIWAVS WLFGAGFHIGELATFTLWIGQGRSLPPLPVFGLLPQAVGDEGIRFAVVLIPLVVGFVAGL ASMAMKSGFRIIVGSASDPLDRKDLILELAYPAGGFCLSSVVISLLSSVMFGVSNGSLGK ARLKYVGVDVMQSAQAVGRPSAMGLCMAWVLSLIGVAIVFGIRWIARRTGAQRAATTHPR TIVSRKSIQPTTKKEHDDQHESTDTTGSGVRLP >gi|197324945|gb|DS990229.1| GENE 1028 1073518 - 1074444 1184 308 aa, chain - ## HITS:1 COG:ML0156 KEGG:ns NR:ns ## COG: ML0156 COG0074 # Protein_GI_number: 15826979 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, alpha subunit # Organism: Mycobacterium leprae # 1 302 1 297 300 312 60.0 4e-85 MTAFIQEGAPVIVQGMTGHQGMTHTARMLRAGTNIVGGVNPRKAGSQVTFEAAREGRDVS VPVYATCAEAKEATGAQASVVFVPPRFAKGAVVEAVEAGIGLIVVITEGIPVADSAYFVE LALQRGVRIIGPNCPGLLTLPSQENEHGVNLGIIPDGIVGRGPIGLVSKSGTLTYQLMGE LSDIGFTACLGVGGDPLVGTTLLEALQEFEQDADTKAVVMIGEIGGSAEQDAAAWAAEHM TKPVVAYIAGFTAPEGKQMGHAGAIVSGGKGTAQDKKIALEAAGIPVGRTPGQTADLMRK VLAERSLV >gi|197324945|gb|DS990229.1| GENE 1029 1074441 - 1075646 1568 401 aa, chain - ## HITS:1 COG:MT0978 KEGG:ns NR:ns ## COG: MT0978 COG0045 # Protein_GI_number: 15840375 # Func_class: C Energy production and conversion # Function: Succinyl-CoA synthetase, beta subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 391 1 386 387 329 48.0 6e-90 MDLYEYQARELLEEQHIPTPRAVFAQNSHEVAEAADAIGYPCVIKAQVKIGHRGQAGGVK IAHNRDEAILLSESILPMTIHGHKVNGVLVAEAKNILHEYYVSISVDRTSRDFDVLATAN GGTEVEEIAKEHPESVKRLHINALGDFDMEAAKRMAGQIGFYHADLDQAANILLRMWQCF KDNDATLVEINPLAKIGDPDDEASKSLCALDAKISLDGNAAFRHDGWARFDDPMQADPFE AAAAEHGLHYVHLDGQVGVIGNGAGLVMSSLDAVWDAGKEQGTNVTPANFLDIGGGASAA VMSDSLSIVLSDPQVESVFINVYGGITSCEQVAKGILQAFEELHTSKPLVVRFDGNAAAE GLQILAAANNPNLHVEGTMEQAAAEAARLAANAKASKEAKQ >gi|197324945|gb|DS990229.1| GENE 1030 1075731 - 1076312 744 193 aa, chain - ## HITS:1 COG:alr4582 KEGG:ns NR:ns ## COG: alr4582 COG0503 # Protein_GI_number: 17232074 # Func_class: F Nucleotide transport and metabolism # Function: Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins # Organism: Nostoc sp. PCC 7120 # 22 189 3 170 172 149 50.0 4e-36 MTQSDITIERLADVGAGDAAYLVSKIRTIPGFPKEGIKFRDFMPVLADGKGLRILMKALQ ASLPVTEDSFDAVAGLEARGFLFGPALAAMLGKGFIAIRKAGKLPPETIAEEYDLEYGTE KVEIETSAIRPGDRVLIVDDLIATGGTAKAAMDLVEAAGGTVVGFSFVMGLRGLDGLDKL GDKPSSTLVSMPA >gi|197324945|gb|DS990229.1| GENE 1031 1076330 - 1076755 525 141 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1011 NR:ns ## KEGG: BBPR_1011 # Name: yajC # Def: YajC protein translocase subunit # Organism: B.bifidum_PRL2010 # Pathway: Protein export [PATH:bbp03060]; Bacterial secretion system [PATH:bbp03070] # 1 141 1 141 141 217 99.0 1e-55 MPQGSSSYLIMIVSIVLIGIMMWWQSRKAKQQQQKMKDFRSSLESGTEVITIGGIIGKVV SVDEEYEEIVIDSEGSLLRFTFRAINKEYTRPAFIHDDEVEDAEQTDEADDQAQVPVDKA LESAENATQSDDSAQTADAEK >gi|197324945|gb|DS990229.1| GENE 1032 1076816 - 1077901 1193 361 aa, chain - ## HITS:1 COG:MT2669 KEGG:ns NR:ns ## COG: MT2669 COG2255 # Protein_GI_number: 15842132 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, helicase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 16 348 1 333 344 383 61.0 1e-106 MTSNIDMQDGRTNTGVSEDSLRMVSATAINDEPISDEELRPHALDGFVGQPRLKAQLQLF LDAARKRDTAPDHILLAGPPGLGKTTLAMIVANELEVPIRITSGPAIQHAGDLASILSSL DAGEVLFIDEIHRLPRAAEELLYIAMEDFRVDVMVGKGPGASSIPLTLPRFTVVGATTRE GMLPSPLRARFGFTAHLDFYPHDELEKLIERSSGVLGVSLGEGAAAELALRSRGTPRIAN RLLRRVRDWAIVHDLQVVDVDDVRAALALYQIDSEGLDRLDIAVLNAIVRNFNGGPVGLN NLAAMVGEESETVETVCEPYLVREGFLIRTPKGRVATAKAWSHLGLEPQGETNGEDVSKL F >gi|197324945|gb|DS990229.1| GENE 1033 1077908 - 1078525 656 205 aa, chain - ## HITS:1 COG:Cgl1621 KEGG:ns NR:ns ## COG: Cgl1621 COG0632 # Protein_GI_number: 19552871 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, DNA-binding subunit # Organism: Corynebacterium glutamicum # 1 172 1 180 206 106 36.0 3e-23 MISTLTGRVESVEASSAVIEVHGVGYEVRMAAADLAALHAGQETHVFTSLTISQDAVTLF GFLSPASKRMFLQLQKVSGIGPKVALSLLSTLPPDRLAKAVADGDTAALSKAPGLGKKGA QKIILELAGRIDLDQIRPEADGPSESRDPGAKQVIEGLVSLGWRPQTAEEAVRQACDAAS IATPISAEDVPRVLKLALSSLDRGR >gi|197324945|gb|DS990229.1| GENE 1034 1078701 - 1079282 583 193 aa, chain - ## HITS:1 COG:MT2671 KEGG:ns NR:ns ## COG: MT2671 COG0817 # Protein_GI_number: 15842134 # Func_class: L Replication, recombination and repair # Function: Holliday junction resolvasome, endonuclease subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 185 1 188 188 135 49.0 3e-32 MIILGVDPGLTRCGVGVIEAGANRRLSFIHVDVVRSDPHTSQDLRLLTIYNGLCSKMDRF IPDAVSIERVFAQSNRNTVLGTAQAAGMAMLAAAQRGIPVALHTPTEAKLAITGNGKAEK IQIERMVAKVLGLNTLPQPADAADALSLAICHALRPQGALQGGEREQHLTAAQRQWAQAA QKAARRAGVRSGM >gi|197324945|gb|DS990229.1| GENE 1035 1079289 - 1080047 1214 252 aa, chain - ## HITS:1 COG:MT2678 KEGG:ns NR:ns ## COG: MT2678 COG0217 # Protein_GI_number: 15842143 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 251 1 251 251 283 60.0 2e-76 MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAARMGGGDPDGNPSLYDAIYKAKKAS MPADNIKRAVKRGSGEEAGGANYEDIVYEGYAPAGVGLIIECLTDNRNRAAAEVRSTLTK GNGSLATSGSVSFNFERKGQIEVPSEGVDFDDLFEKAGDAGAEDVIDDGDVFTVITDPSD LHTIRKALQDSGFDYDSADMVMRPKNEVSLSLEDAQKVSKLIDNLDDLDDVQNIYANWTA SDEVMAQLADEE >gi|197324945|gb|DS990229.1| GENE 1036 1080326 - 1083508 3595 1060 aa, chain - ## HITS:1 COG:VC0613 KEGG:ns NR:ns ## COG: VC0613 COG3525 # Protein_GI_number: 15640633 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Vibrio cholerae # 207 726 139 618 637 157 25.0 1e-37 MNIKRRGLARFMSLICASAMLLVPASSALAQHNAEAAAAAESSTSTVSNLATMATVTASG REVSSGFGPELAADNQDLPDNPTDKSVHNASGASRWSADRGSGPWWLAYEFPGEATISSV NIAWGNTYATNYSIQTSDDGSNWTDVKTGLKATAQAQWVKTTFDTPIKTRHIRMIATTKS QSWSLSVWEMRTMGTISAVATDPLSRLTPRPLYAQSADGEAFELKKNTCVSVSDGSLLPA VDVMRDELGTSYGLKLAEGTNCPITFTLDENLDVTGHVGSAQSITADEAYTIVSDADSVT VKARSATAGIWAAQTLLQLIGPWTNSTVKLADVAFIPAVNIADAPRYQWRGVLVDPARSF YPLDEMKQMIDVMSAYKMNTLHLHLSEDEGFRVEITNDGRADGDTTDYTQLAIKSGAISY QSAWTSNWSPAQDGRTGYWTQSEFIELVAYAADHGIAIVPEIDGPGHSFSLLHGLAELNT GNSNPKPAAGEDTPAFIQSAQGRSSLATDADITYTVLGHIMDQLDGMIDKGIKASTMPAS ELKRMYFHLGGDELFLSGGAGNKTERLQEYLGRSGALVKERDKTTIVWNDGLDAVDQIPE GSVVQHWTGNAANNASIQKLLNQRNGKIIMSPAGNTYFPQRPGTETTGVTWACGACTTSN FYQWNPTSSAGTTEDKVLGVEDALWSEHLRSLNDAEFLMYTRMMATAEVGWTQQNRKDYD NWNKRVGDIAIDLMNRGANFHKATEVTSWKGSYAAVDAAEQKVTDGKVLVGRYAEPGLTG TDGLSFTATYTAEGGTAVNLPVTPDMKQTYSQQQLKNGRLVVNGAHMNSIVDVYVTLPSD VLAADSEAVGRLDVSVSSSTYPIPSDSSMSIAIKDGKVTQTWTGDERPTPDPDPEPEVTV VSIKASTSQSDVKVGDTFDPSKVKVVATKSDKTTAVLAAADYTIAVTDKDGNAIDVTKPF EAAGDLTVTVALKDDGSIKDSFTMTVTDKGTVDPDPDPTPKPNPDPQKPSGDNKPQIKPE GGKPGDVVAETGASVSGAALAAMICAAGAIVMLAVRRQRR >gi|197324945|gb|DS990229.1| GENE 1037 1083749 - 1085779 3263 676 aa, chain - ## HITS:1 COG:Cgl1631 KEGG:ns NR:ns ## COG: Cgl1631 COG0441 # Protein_GI_number: 19552881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Threonyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 10 674 22 684 686 821 60.0 0 MALSSISITVNGEAKEVEATTTGVELFADDKDIIAVRLNGELRDLCTPLSDGDAVEPVAI DSEDGLGIMRHSATHVMAQAVQELFPNVKLGVGPIIKDGFYYDFQVDEPFTPDDLKAIEK HMQRIVKSAQSFRRRVVTEEEALKEETDQPFKIELIEDKEAHLDPSTATEVSGKELSFYD NVDRDGNTVWKDLCRGPHLPNTRFIKAFKIERSAAAYWRGSEKNPTMQRIYGTAWATKED LKAYQTRLEEAAKRDHRKLGAEMDLFSFPEEIGPGLAVFHPKGAAVINAMEDYSREMHRK HHYSFVQTPHITKGGLYETSGHLHWYKDGMYPPMHLDEEYDADGNITKPGADYYLKPMNC PMHNLIFKSRQRSYRELPLRLFEFGTVYRYEKSGEVHGLTRVRGLTQDDSHIYCTREQMK DELTSLLTFVLNLLKDFGLSDFYLELSTKDPDKYVGSDEIWEEATRTLREVAEASHLDLV ADPGGAAFYGPKISVQARDAIGRTWQVSTIQLDFNLPERFQLEYIAKDGTHQRPVMIHRA LFGSIERFFAVLLEHYAGAFPAWLAPVQVLGVPVADEFAPHLAGFVKSLEDEMVRCEIDY SDDRFGKKIRNASKSKVPFILIVGEEDMNNNAVSFRFRDGSRLNGVPVDEAREKILAVIK KRAQVNSADDFAAALA >gi|197324945|gb|DS990229.1| GENE 1038 1085991 - 1087619 1831 542 aa, chain - ## HITS:1 COG:RP176 KEGG:ns NR:ns ## COG: RP176 COG1301 # Protein_GI_number: 15604051 # Func_class: C Energy production and conversion # Function: Na+/H+-dicarboxylate symporters # Organism: Rickettsia prowazekii # 68 465 6 397 399 174 29.0 4e-43 MLFRPLLYGESMESRAVPHLYQASRRHDTKGDDMSDTAWNWVALGATVVLFAGLAYLSIR KKAGFSVRVLIATVLGIVVGIAFKGHTDYVAAFGSVWSNAIAAIVVPLLLFSVIAAITNL GESLKLRNIGIKTVVFLLINTFTAALITLGLALLFRVGEGFKFTLPTDYQQREVPAVLDT IVALFPTNLVQNWYSNQVVPVVIFAILVAVAYNSAAKTAKGAAAVKPFKAFVDAGNVVLS KATQIVVGFTPYAVLALIAAAVSNSDVAALLPLVTVLVVAYVAMILQLFIVQPLILSVTT RLSPIPFFKAYWPTGVVAFTSESSIGTIPVTVRNLRSNGVPGDIASFVASLGANLGMPGC AGVWPVLLAVFAVNAQGISYSPAQFLFLVVLALLVSIGTVGVPGTATITATSLFAAAGLP IPFIAISQPISQIVDMGRTALNVAGAANTAVIVAATEKDFDKDLYYGRKEFEDEDASEDE DAVAAAQPEAKAPVEAPAAGKPSGLGAVKGASSANLLNFSPASALEGTGEEQCGIKPSRK KD >gi|197324945|gb|DS990229.1| GENE 1039 1087653 - 1087871 78 72 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVKRNLAKVETAGSSPVVRSINPLWSMGLRIRCFQRPYNTPLLASRFTYRRKSFSHLGNC RSPLLPTLKRYC >gi|197324945|gb|DS990229.1| GENE 1040 1088139 - 1089704 1653 521 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0966 NR:ns ## KEGG: BBIF_0966 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 521 1 521 521 914 100.0 0 MTEQQPQEPYGDPQYESYREGTPTESVPTISMPTESIPITGASGPTGASRQRQAPQPHTP YGFSSATRPPTSGPYAPGPFPTPEARATQGSYEAPAPWSRTLNGASSSASSPFTTGQTNR QAHPPYPPYPMPPYQQYRPMQPPRKTGIGAGGITAIVAAVIVIPALLFIAVTAGLMTVAK NHISQGANEPTNSYGNASPSDPNQADPEPTATVYRMDEWPGYESMVTYVTDKLDHYKDEI LNNNTMFMSEYRIPDTQDGTDYMTGYMAALLGTVNEAKAAADETSEDPDALDAKIDSYRT TVDTLEARFKKGQALGVSMTVTGNDGKKYTVDGSKSITLRPTWDELEQRVAKASNSLGSG NAASAQKLVELADMKLSWDIDEGFRQCPAFAGTDDGDNKALTKSETFGFYCPATPNVIYG NRSMPDWNMTYAPAAGVRHELSHHAIHMRCGTIEPEAIMQNGVNRTEGVTNSYAVKYMGA NRALIQQSIDYAASTGHKQYRMDAFTDRAAERIHSGQCNAG >gi|197324945|gb|DS990229.1| GENE 1041 1090383 - 1091351 729 322 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0967 NR:ns ## KEGG: BBIF_0967 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 46 322 1 277 277 564 100.0 1e-159 MGFAKSGVSRDVTACDRSPTGLAIPRFSDGISRLHQPRGTVTLVDMSEEAKAHEPVMIAA FEGWNDACQAATNVIRHLVSRYDSREIRHIRCDGYYDYQVARPMLCKVTGRRRILWPQTT FYAIDVAPSTTLYAQIAPEPNYRWNDYCRQSMRIAEELDVRHIVTMGAMFADCPHTRALP LDISDQQCQCDMDREYSGPVGIPTVLDCMACEEGFSTTSMWVSVPQYLGSDECAQATMQM LAALSDRIGVELDPGDLAGKAEQWKAQASVLTRCNDDLAQYVKHLEHDYDMQEKADQVAR FGAPAAEQLVREAEAFLRSRGK >gi|197324945|gb|DS990229.1| GENE 1042 1091473 - 1092417 1493 314 aa, chain - ## HITS:1 COG:AGc1833 KEGG:ns NR:ns ## COG: AGc1833 COG1968 # Protein_GI_number: 15888341 # Func_class: V Defense mechanisms # Function: Uncharacterized bacitracin resistance protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 283 3 274 278 224 49.0 1e-58 MNFFQAIILGIVQALTEYLPVSSSAHIRIIGDLMLGADPGAAFTAIIQIGTELAVILYFR RDIINILSHWFGCLFGKNGPDWRARMGRGDKYATLGWNVIVGSIPIIILGFTLQNIIETS LRNLWITVTVLFLFGLLLWIVDARSRQIKTMDDMNYRDAFLFGLGQSMALIPGVSRSGGT ITVGRALGYTRESAVRLSFLMAIPAVFGSGLLEAVKAVKNAGTDRMFPGWIPTIIAMIIS FLLGYIVIIGFLKFVSTFSYKAFSIYRIGLSVIVALLLLFGALKPYEPVKAASAASVVNP VSIVTVEQSAAAVR >gi|197324945|gb|DS990229.1| GENE 1043 1092556 - 1093347 1125 263 aa, chain + ## HITS:1 COG:Cgl2483 KEGG:ns NR:ns ## COG: Cgl2483 COG3001 # Protein_GI_number: 19553733 # Func_class: G Carbohydrate transport and metabolism # Function: Fructosamine-3-kinase # Organism: Corynebacterium glutamicum # 19 263 17 246 249 147 39.0 3e-35 MARYRKSRMWAPQGFFECEGRGLQWLGEAQAQGGPRVVDVYEWGKDFLDIERVSPCSPTA KAAHDFGAALARMHDAGTDHFGSAPAGYDGTCYFGPLQDPVPMATGAWDDPITYFAQGRL VPMVELGMRRGELTQADMDLTNRVIDAMPDLLGRAAQDKPARVHGDLWSGNVMWTDDRGS CEAVLIDPAAHGGHREEDLAMLHLFGMSYLTEIMDGYQSVHPLKAGWQERTTLWQLYPIA GHCVFFGGGYISEYRSMCRSLLK >gi|197324945|gb|DS990229.1| GENE 1044 1093483 - 1094634 1060 383 aa, chain - ## HITS:1 COG:ML0625 KEGG:ns NR:ns ## COG: ML0625 COG0484 # Protein_GI_number: 15827255 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone with C-terminal Zn finger domain # Organism: Mycobacterium leprae # 3 383 4 376 378 289 43.0 5e-78 MADYYEVLGVDKSASDDEIKKAYRKMSRKYHPDIAGPEYEDKFKEVNNAYAVLSDPDKRR MYDSGVDPNDPNAGGFGGASGFGMGDMSDIFGQFFGGAFSGGSQGPVPRTQPGRDALASA TIDLKTAVFGGTTHIKINTFGLCQQCGGSGTANGSQPTTCPDCHGQGFRQKVVRTMLGQM MTSAPCERCEGHGTVISDPCPSCMGHGRVRTSREVGISVPAGIADESRIRLAHQGEVGEG GGAAGDLYVDVRIKADKRFTRSGDDLHCWIQVPMSWAALGHDMEIDTFDGKQKVTVPAGC QPEETIVLKNLGVTKLRQSGERGDLVAHVNVHIPTKLTDSERSLIEQFAASHDASASHVA QSSRPATGSQRKGFFSKLKDALS >gi|197324945|gb|DS990229.1| GENE 1045 1094687 - 1095943 1156 418 aa, chain - ## HITS:1 COG:MT2443 KEGG:ns NR:ns ## COG: MT2443 COG1420 # Protein_GI_number: 15841886 # Func_class: K Transcription # Function: Transcriptional regulator of heat shock gene # Organism: Mycobacterium tuberculosis CDC1551 # 2 301 4 305 343 199 42.0 9e-51 MAQPRRMVVLRAIVEDYIRSQEPIGSAALTKKHDLGVSSATIRNDMASLEEEGYLIQPHT SSGRIPTEKGYRYFVDRLSTVVPLSDAQRKGIAAFLSGSVSLQDTLQRAARLLSHITGQV AVVASPSPAKAKVLRVQIVPVSSTLLLIVVITDAGNVAQHTLALSPQPTDITLADVGSVV NGACLGLTFAQAAERVRSLKSSRRESVALLEGLAQVFEAMGDNERSSELYMAGASHLAHR RDIADMAPLFDALEEQIVLMKLMSALSEDTDAYGVGVAIGSETHTPELLHASVVTSGYGN SPASRTELAESDAGHEDGGGSALGGTAHANTAHTGMAGEPRITDDADAEPGKMDDGDSVA MPSLDGGSGGSGESSGPVAFVGSIGPTHMDYAATIAAVRAVARYLTRAISSYDDGDGN >gi|197324945|gb|DS990229.1| GENE 1046 1096127 - 1096288 58 53 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYFPSNTSGTTHFGLCRAMHALTLQSHTNVVNRLSGSLLACFGRLCYVSAHKY >gi|197324945|gb|DS990229.1| GENE 1047 1096291 - 1098399 3041 702 aa, chain + ## HITS:1 COG:Cgl1536 KEGG:ns NR:ns ## COG: Cgl1536 COG0021 # Protein_GI_number: 19552786 # Func_class: G Carbohydrate transport and metabolism # Function: Transketolase # Organism: Corynebacterium glutamicum # 7 695 23 698 700 686 53.0 0 MTEFKETELDERAINMAKVLSADAVEKAGSGHPGSPVSLAPVAYTLYQHFIKHDPNDPNW EGRDRFILSGGHASLTQYVQLYFSGYGVTLDDLKHFRGGADTRTPGHPEYGLTPGIEMTT GPLGQGFASAIGFAYGERFQRGLLDPETPKEESPFYHKIWAICGEGDIEEGISGEAAALA ANQKLGNITVIFDANRIQIEGDTNLVLAEDVLKRFQAYGWYTDEFSFIQPDGSYKEDIEG LAEVIAKAEKAAPDQPKLIKVHSLIAWPTPGKTNDPSSHGSKLGAEAVAGLKKLLGYDPE ESFHVDEEALAHARKVAERGLEAHKEWDEKFDAWRKANPDKAALYDRLKAGELPEGFDKA LDDLEATFEVGKKVATRGASGSVLNAIAAVMPELWGGSADLGGSNKTDLKGAATFAPAEC ATKQWPVCNEFGRQLHFGVREFTMGCITNGILLGSHTRPFGGTFFMFSDYERSAVRLAAL MEIPNLYVWTHDSVAVGEDGPTHQPVEHLASFRAIPQLEVIRPADAFETAEAYRYFFEKK NTLPGAMVLTRQGVPVLAETAAKAKDGVRKGAYVLVDTEGTPDVILMASGSEVQWAVDAA KTLAGEGVKARVVSVPSMEWFEEQDAEYKEAVLPASVKARVSVEAGVAMPWYKYLGSYGK PVSIEQFGLQGDGAQNMIDLGITAEHVVEAAKASIAEAEAAK >gi|197324945|gb|DS990229.1| GENE 1048 1098532 - 1099635 1872 367 aa, chain + ## HITS:1 COG:Rv1448c KEGG:ns NR:ns ## COG: Rv1448c COG0176 # Protein_GI_number: 15608586 # Func_class: G Carbohydrate transport and metabolism # Function: Transaldolase # Organism: Mycobacterium tuberculosis H37Rv # 9 363 12 369 373 368 57.0 1e-102 MTEATQRTSDNGVSIWLDDLSRTRIESGSLQELIKDKNVVGVTTNPSIFQKALSQVGPYD AQLKELGKVDVETAVRELTTTDVRNATDIFREIAEATDFVDGRVSIEVDPRLAHDTENTE KQAVELWEKVNRPNAMIKIPATLEGLPAITATLAKGISVNVTLIFSLERYEQVIDAYIEG IAQAAANGHDLKHIGSVASFFVSRVDTAVDKLLEANGSDEAKALEGKAAVANARLAYELF EKKFAADPRWADLAAKGAKVQRPLWASTGTKNAAYSDCKYVDELVAKHIVNTMPEKTLNA LADHGNGAPSIEGTYEESHAVIDKLAELGINLKDVTDKLEADGVAAFIKSWDSVLADVQS GIDRVNA >gi|197324945|gb|DS990229.1| GENE 1049 1099877 - 1100689 1007 270 aa, chain + ## HITS:1 COG:BS_yoaK KEGG:ns NR:ns ## COG: BS_yoaK COG3619 # Protein_GI_number: 16078924 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Bacillus subtilis # 27 203 11 159 225 66 32.0 4e-11 MNLHLAEAGRTLIPRKDDEYGLLSPAMVLMTFIAGLVDALSYLALGHVFVANVTGNIVFL GFALAHAQGFVWWTSALTLVCFAFGAFIGGRIIRRFGEHRARHLLISSIVQAAFILAALI GLYLLNHYSAEPALGMGSMQASSQPSLNFPTARHIDVHHLMLIVLIAPAMGIQNSTARRL AVPDLPTTVLTMTVTGIVADTSAHGHEMSKLGRRAVAVLAMFLGALTGAALQSKGHEDII LMVALACLLAVIGMMLAHAHSTAAWATARH >gi|197324945|gb|DS990229.1| GENE 1050 1100854 - 1102266 1176 470 aa, chain + ## HITS:1 COG:CAC1610 KEGG:ns NR:ns ## COG: CAC1610 COG1114 # Protein_GI_number: 15894888 # Func_class: E Amino acid transport and metabolism # Function: Branched-chain amino acid permeases # Organism: Clostridium acetobutylicum # 29 460 12 430 440 260 40.0 3e-69 MATTPIPTDINTAESGGRRRLPFSGRLVMAFTFFSMFFGAGNLIFPPFVGAQAGAAAVPA IIGFIVSAVGLPILGVLAVTFAGGFDELARRVSPAFASLLGVAIMLTIGPCFAIPRTATT SYEMMVAPFLPSRTGWGGWTTQLAYSLVFFAVAFLLAQHPEKLSAVLGRFMGPLLLAFIA VLFIACLAHGAVTPTQPTGDYAVHQASRGFLDGYQTMDLLAALYFGIVISANVRAMHVTD NTLIRRETAYAGLGTGILLIVIYAVLGYVGVVSGSIASVNPATDTGATVLTNLTASLFGT FGMVFLGIVFVIACLNVCTGLICTCATYFHTRFATVAGRRVSYRAWQALFTVFSFVVSNA GLSMIIKVSVPVLAALYPIAIVLVTLALTHRILAAHFPRVYFWMVLLVAIVSFATCLASI VTVFGGSLPWLEAILNMLPLQQFQLGWIIPALAGLLIGVLDSAAHSSFKR >gi|197324945|gb|DS990229.1| GENE 1051 1102493 - 1102948 148 151 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140279|ref|ZP_07802472.1| ## NR: gi|313140279|ref|ZP_07802472.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 115 151 1 37 37 79 97.0 1e-13 MERVGRLGWSSQTTLRRPTLLEGRVIVSPDTLGQIRELIGSIVRFGEQDNDLGLRTIFRD EIVLGARSFASKIDGDRDITTFHRPLETRPDFSVMSYRSCWSPSACFILSIVATVTIRCS DGIAEIAVLHAGVTGHGNDPTAASGKNQYHG >gi|197324945|gb|DS990229.1| GENE 1052 1103134 - 1104504 1569 456 aa, chain - ## HITS:1 COG:CAC0883 KEGG:ns NR:ns ## COG: CAC0883 COG0534 # Protein_GI_number: 15894170 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Clostridium acetobutylicum # 8 426 7 425 448 252 34.0 9e-67 MTADSSGLGTKPVARLALTMSVPTIVAQAANASYTIIDRLFIGHIPEVGDAAMTGVGICF PILLAVTAFASLIGAGGAPRASIELGRGNFKKAERILGTSAAFLVAIALTLTVILQATKE PVLRAFGASDANIGYAVDFITIYLVGTVFVQLTLGLNNFISAQGKTTVAMTSVLIGTGTS IILDPVFIFVLGWGVKGAAVANVIAQLISSVWIILFLASGRSAIRLRPSNIRFNRVIVPI LTLGLAPFIMQITECLINVVFNVGLQRYGGDDYVTSMTIITSLMQVVSVLTNGFQQGIQP IIGFNFGARRMDRVRQAIRVAFIAQITSATVLVSLLAAFPSVFAAWFTSSPEVIGIVTRM MPVFVTGWGVFGIQMGAQCALVGMGQAKQSVFLAIFRKIIMLVPLALTLPHWIGVTGIFL AEPISDATSGIVAGILFYVTYRSLTRGRIADDAKNR >gi|197324945|gb|DS990229.1| GENE 1053 1104501 - 1105337 1042 278 aa, chain - ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 7 276 17 275 277 74 27.0 2e-13 MTNPEQRLIVTDLDGTLLHDAPTFEERFITQRSIDTVKRMHDAGYRFAVATARPVSTGFE YAGKLPVDAYIYLNGALIDFAPERSDYDLLTSGRLPSDGHLLKVGFSSARACEVCRYLLD EIPGLSLGVVMDDVRYTNFDVSVYWKTQTWQFTDFTDVPDGIADKIIIFPKSEQWAHLKT LVPPDFDVAISEGSMWMLMNPLANKRQALKTLCERMDVRLDGTVSFGDDLIDIGMMTTSE TGVAVANANPEVIKIADEICPPNNDDGVAQWIERHLLA >gi|197324945|gb|DS990229.1| GENE 1054 1105390 - 1106340 1120 316 aa, chain - ## HITS:1 COG:BH3937 KEGG:ns NR:ns ## COG: BH3937 COG0039 # Protein_GI_number: 15616499 # Func_class: C Energy production and conversion # Function: Malate/lactate dehydrogenases # Organism: Bacillus halodurans # 1 309 1 302 310 246 40.0 3e-65 MVTMNRNKVVIVGTGQVGSTAAFAIVTHGLCNELVLIDHSAGKALGESHDLDDGSEFQDR HVKVRNGDYGDCKDADIVVITVGRKPPANSTRLDELGFTIGLVGDVVDRVMASGFNGVIV MVSNPVDVMAWYAWKRSGLPRTQVLGTGTALDTSRLKTIIGEETGLDPRNVGGFVMGEHG DSQFTAWSTVSLGGKPFARFLSDNADRFSSVSTHEIEEKTRTRGNEIVAAKGGTNFGIAS TVAGIVQTILWDERRIVPVSTLLDGEYGERDVFLGVPTELRANGANEIVELELADDELAK LHHSAELVRSYCEGLL >gi|197324945|gb|DS990229.1| GENE 1055 1106448 - 1106696 437 82 aa, chain - ## HITS:1 COG:Rv1440 KEGG:ns NR:ns ## COG: Rv1440 COG1314 # Protein_GI_number: 15608578 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecG # Organism: Mycobacterium tuberculosis H37Rv # 3 79 40 116 117 59 41.0 2e-09 MHILKIVLEIIVVIASILLTLLILMHKGKGGGLSDMFGGGLTQNAGTSGVAEKNLNRWTI FIALVWVAIIIALGLMTKFNLV >gi|197324945|gb|DS990229.1| GENE 1056 1106775 - 1107569 841 264 aa, chain - ## HITS:1 COG:MT1482 KEGG:ns NR:ns ## COG: MT1482 COG0149 # Protein_GI_number: 15840896 # Func_class: G Carbohydrate transport and metabolism # Function: Triosephosphate isomerase # Organism: Mycobacterium tuberculosis CDC1551 # 3 257 2 254 261 244 49.0 2e-64 MASRIPLLAGNWKMNLDHLEATYFVQKLVWLLRDARFDYSRCEIALMPSFTSLRSVQVLV EADKLKIRYGAQAVSVTTQGAFTGDVSADMIAHLGCSYVIVGHSERRKYHPEDDVNIVDQ VRAVLAAGMQPILCVGESFEERRQGIELDFAVGQVHDVTRDLSDKEAAKLIIAYEPVWAI GTGMVATPDTAQQAAKAIRDDLGEMFGPAVADTVRILYGGSVSSKNATHLIGEPDVDGFL IGGASLDPDELAKIARLTLKATRR >gi|197324945|gb|DS990229.1| GENE 1057 1107638 - 1108843 1904 401 aa, chain - ## HITS:1 COG:TM0689_1 KEGG:ns NR:ns ## COG: TM0689_1 COG0126 # Protein_GI_number: 15643452 # Func_class: G Carbohydrate transport and metabolism # Function: 3-phosphoglycerate kinase # Organism: Thermotoga maritima # 3 397 5 391 399 392 56.0 1e-109 MKTLKDLGDLKGKRVLMRADFNVPLDGTTITDDGRIKAALPTITALREEGAKVILMAHLG RPKGKVVPELSLAPVAKRLGELLGVEVPLAKDTYGEDAQAKVAAMNDGDVVLLENVRFNP EETSKDPTVRAPYAKKVAALGEVFVSDGFGVVHRAQGSDYDVAADLPAAAGKLVEKEVKA LSKATENPERPFTVVLGGSKVSDKLGVIENLLDKANRLVIGGGMVFTFLKAKGYEVGTSL LEEDQLDKVKGYIATAEKNGVELVLPTDVVVNAGFPAGDTPVAPEVVAADAIPADKMGLD IGPDSQKLFHDKIVDSKTVVWNGPMGVFEVPEFAAGTKAVAQGLVDATAAGAFTIVGGGD SASAVRNLGFPEDGFSHISTGGGASLEFLEGKELPGLKVLD >gi|197324945|gb|DS990229.1| GENE 1058 1109001 - 1109972 958 323 aa, chain - ## HITS:1 COG:MT1466 KEGG:ns NR:ns ## COG: MT1466 COG1481 # Protein_GI_number: 15840880 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 1 310 1 308 327 256 52.0 4e-68 MALLDDVKSELAAIDNELPAAKKAQATAMIRFGGGLRLVQRQIIVQAQFDSLKAAQWLQD TIRDLYGHEAVMTQVSRSTPNGATVQRYMIHVERGGAALALQTGLLDRRKRLVRGLPADI ISGNIAQVKAAWRGAFLAHGALSDPGKAGFLEIICPSNEAALALSGAARRLGITAKPRQL RSSERITLKDPDAIERMLILMGAPHSAREWTGKRTDGEARGKANRLANFDDANMRRSAKA AAEASEKVRRAFEILGDDIPENLRAAGQLRLEHGDASLEELGRLADPPITKDAIAGRIRR LLQLADKTAKTRDREQSGASVGR >gi|197324945|gb|DS990229.1| GENE 1059 1110139 - 1111083 1002 314 aa, chain - ## HITS:1 COG:Cgl1553 KEGG:ns NR:ns ## COG: Cgl1553 COG1660 # Protein_GI_number: 19552803 # Func_class: R General function prediction only # Function: Predicted P-loop-containing kinase # Organism: Corynebacterium glutamicum # 26 311 23 308 309 278 51.0 9e-75 MNDHATMSPAGAPVPPAGGNRPEPADDFEVLLITGMSGAGRSHAADCVEDMGWYVVDNLP PKLLVPLVDMMTNAGKDGVHKLAAVIDVRSREYFDDLSAVLSHLDDLGVRARILFLDASD EVLIKRYESVRRPHPLQRGNRLIDGILEERSLLANLKERADMVIDTSSLSIHQLSTKLYE AMLGSGPSTVAVHIFSFGFKYGLPMDADFVADVRFLPNPFWVPTLRELNGQDKPVSDYVL SSPGAGDFLDAYERAILVALEGYAHEDKHFVTIAIGCTGGQHRSVVMSEELARRLRAHGI SVTVSARELHRARA >gi|197324945|gb|DS990229.1| GENE 1060 1111083 - 1112045 1157 320 aa, chain - ## HITS:1 COG:Cgl1591 KEGG:ns NR:ns ## COG: Cgl1591 COG0169 # Protein_GI_number: 19552841 # Func_class: E Amino acid transport and metabolism # Function: Shikimate 5-dehydrogenase # Organism: Corynebacterium glutamicum # 4 320 5 270 276 122 36.0 7e-28 MTVIAHRCAVLGKPIAHSLSPVLHNAAYKALGLDDWAYERHEVGESDLDGFLKGLDPTWC GLSLTMPLKKTIQPYGTPSNMWAQRLKVANTAIFDWPAEPGITPGATPDGTSATGSLPAI RLYNTDVMGIVLAFDHELKALGEPDRWKSVTSAAVIGNGNTAASAVAACTVMLKNGQTNK RITVAARHPGKNWQLPDIIGEGDAIAYEEKTIDASADTLRDADIVISTIPGHAADAVAEA IGNDDSFRPRGILLDVVYDPRPSALIRAWRAKGGLAIGGEEMLLWQAILQVILMTGADTA DSSLTDVLEPAMRHALEEAL >gi|197324945|gb|DS990229.1| GENE 1061 1112239 - 1114581 1977 780 aa, chain - ## HITS:1 COG:Cgl1554 KEGG:ns NR:ns ## COG: Cgl1554 COG0322 # Protein_GI_number: 19552804 # Func_class: L Replication, recombination and repair # Function: Nuclease subunit of the excinuclease complex # Organism: Corynebacterium glutamicum # 48 779 7 694 696 557 43.0 1e-158 MTNDIERHSPEVWRKAADSLRGEANASDAVAKVNRNGAPLLGDTRDLFRPKTGDIPAQPG VYKWRDGEGRVIYVGKAKSLRNRLTNYFQPLYLLHPRTQTMVLTARSLEWTVVGTELEAL TLEYTWIKEFDPRFNVQFRDDKTYPYLAISSGEAVPRVWVTRSRKRRDARYFGPYAKVWE LRQSLDKLLRTFPVRTCTTSVFHKAELTGRPCLLASIGKCSAPCIGRIALKEHRRMCEQL VGVMTGRLGKSYIAQLTRDMKDASAELEFEKAARLRDEIQMLQTVMQQNAVVFDQDVDAD VFGMASDELEASVHAFIVRDGSIRGERNWSVERVEDVSDGELIDDLIMQVYSDVAADNGL NVDPHDGTDPSMASPSGNEGVSTAEGGASIVERRDAIGSTQTVTAKSSVERAQATRTRRE RQEQTGRADLLAPIAPVPREVIVPVEPARRAELESWLSGLRGAVVTIRVASRGEKKALMD RANENAGQALQRSKMSRISDMGTRTAAMNDVAKALGLAQAPLRIECYDISNTVGGAFQVA SMVVFEDAIAKKSEYRRFAIRGDDGKGALDDLSALYETLTRRFRHGNIAGDSGDSMDNER RAESSDTSASTTTASSPDGIRDAGVVQQNTNRHHFAYIPNLVVVDGGHPQVMAAAKALAD CGVNDVAVCGLAKRLEEVWVPDDEYPIILKRQSEGMYLLQRVRDESHRFAITYHRQTRRK GALRSALDGIPGVGETYQKRLLSHFGSVRAMRDASVEELEAVKGIGHAKAEAIHTALHAE >gi|197324945|gb|DS990229.1| GENE 1062 1114578 - 1117568 3360 996 aa, chain - ## HITS:1 COG:MT1675 KEGG:ns NR:ns ## COG: MT1675 COG0178 # Protein_GI_number: 15841093 # Func_class: L Replication, recombination and repair # Function: Excinuclease ATPase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 54 996 12 961 980 1309 68.0 0 MTGRKTSKSGGGDVVIERVMSSDTFLSREIRKAPMRKTDSSLVADISHIPNDLKITIQGA REHNLKNVDLAVPRNRMVVFTGLSGSGKSSLAFDTLFAEGQRRYVESLSAYARQFLGQMD KPDVDFIEGLSPAVSIDQKTTNRNPRSTVGTITEIYDYLRLLFARTGVPHCPECGELVSA QTPQQMVDTLLKNPERTRFQILAPVVRGRKGEFADLLELLRGDGYARALIDGEERRLSDD IKLTKQKKHTIEVVVDRLMIRDGIRQRLTDSIETALRLSKGVIVADFVDLDEKDPNRRQP FSEHRACPNGHQLQLDEIEPRTFSFNAPYGACPVCDGIGYKLEIDPDLVIADDSKSLSDG VIEPWGGGKTTTEYYGHVLQGLADELGFSMDTPWRDLPEDVRHSILYGHDFKVNVSYRNR WGRLREYSTGFEGVVRTLMRRYHETDSDQMKQYYESYMREVPCQACNGRRLRPEVLAVTV DGESIADVCDMPVERGLAWINGLKLEGAAATIAGEVVKEIRARLGFLNDVGLNYLTLSRA AKTLSGGEAQRIRLATQIGSGLVGVMYVLDEPSIGLHQRDNARLIETLHHLRDLGNTLIV VEHDQETIERADWVVDIGPGAGEHGGEVIYSGPAKRLIEAPRSVTGDYIAGRRSIEVPAV RRKPHATKRLRVVGARENNLKNITVDFPLGVMTVVTGVSGSGKSTLVNTILYPVLADKLN GARIVPGKHTRVEGLDQCDKVIHVDQNPIGRTPRSNPATYTGVWDKIRTLFAKTPEAQVR GYGPGRFSFNVKGGRCEACHGDGTLKIEMNFLPDVYVECEECHGKRYNRETLEVKYNGKT VADVLDMPIEEAATFFKAYPSISRYLDTLVQVGLGYIRLGQPAPTLSGGESQRVKLATEL QRRSTGKTVYILDEPTTGLHFEDVRKLLLVLQGLVDKGNTVIVIEHNLDVVKSADWIIDL GPEGGDGGGTIVTQGTPEQVAQCEASWTGKFLKDML >gi|197324945|gb|DS990229.1| GENE 1063 1117815 - 1118456 1003 213 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0988 NR:ns ## KEGG: BBIF_0988 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 39 213 21 195 195 253 97.0 6e-66 MTYPQQPGPQQPQAPQQPAYQAPYGAPQAPQAPQQPAGYQYPQGYPQQPGYPQQPGYAPQ PQGPSFLDTMNVRAVTKISAILMVVFIGIETFLSFLRLVDAGNNMSGFGYKLLFGSTPWL MLTAILAVWVIGLNVVQHGPQWFKMAAFVAMVVAAGLKVLAWLIYLFSGNSGYYGYGYSD GAATAIAWIGFFALLGLLAQVIVLLVGWLQQRV >gi|197324945|gb|DS990229.1| GENE 1064 1118614 - 1118913 353 99 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0989 NR:ns ## KEGG: BBIF_0989 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 81 1 81 134 133 95.0 3e-30 MIRRISAICVRTKSGNDERIRRILAHAANIGGSGVYVTASADLSQARNTEDDSLTTLGLM IGMIALIVGGMSIANMMIVTVWNDETKSACDGHWALRSE >gi|197324945|gb|DS990229.1| GENE 1065 1118920 - 1119057 66 45 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0990 NR:ns ## KEGG: BBIF_0990 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 14 45 1 32 32 62 93.0 8e-09 MCYVRECRAKGLTLVKDPARTGRSDKPGKGSVIVGDEWAFSQYSD >gi|197324945|gb|DS990229.1| GENE 1066 1119354 - 1120019 1009 221 aa, chain + ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 220 1 220 224 131 36.0 1e-30 MRILIVEDDRDLAAALDDALRFEGYATRVAYNGLEAVRMLAEQSIDIVLLDRDLPIMSGD AVMETIASNDIPVSVLMLTAAAQVRDRINGLELGADDYLIKPFAYPELLARIRALQRRAG KGDFSGTEFSHNGIVLDTVRHTVTRDGKPVNLSPKEYGVLLEIMKADGSYVNAEELFDTV WAGASATDLTDAIKTTVYSLRRKLGEGNGITSTRGKGYRLS >gi|197324945|gb|DS990229.1| GENE 1067 1120016 - 1121455 1507 479 aa, chain + ## HITS:1 COG:RSp1043 KEGG:ns NR:ns ## COG: RSp1043 COG0642 # Protein_GI_number: 17549264 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Ralstonia solanacearum # 186 463 167 449 466 112 27.0 1e-24 MTASHAADAATDSDATSEAAPVTDTAAATAAAKDTAGGNGHTHRRRRFPWPSTFRGRLIA TISIAALAMLATVIITQNIIVSQAARQQKNNIVMCTDKDTGELITVYFDKNQTSSDLDLE DEPDAVGSSATAVCSPMPSVQQDTVETSDPESTVTKIEVTHIGKTASALTDSFITMMQFI SIGTFIIFAVLSLIASWLVGSRLSKRVAKISKQVEALKPGDLDARIAPDGSDDEIGKLIE SINGMLDRLQNATEAERRFVSNASHELRTPIAAVATNLDAPLSQGRFPADVEPAIRRALA ANRRGSDLVQALLTLSRIQSGVIDAEDVTALQLADFIDDELAEVEEQADKRNILVTTRDV ASDVQVQASKSLMDLAIGNLLRNAIMHNISSGTLDIAARQEHCAIIVTITNSTDETLPDD LMNLKQPFHRGEHSRISAEPGVGLGLSIADAACEAMGATLELDRPDEQSFRATITIASA >gi|197324945|gb|DS990229.1| GENE 1068 1121484 - 1122233 674 249 aa, chain - ## HITS:1 COG:CAC3297 KEGG:ns NR:ns ## COG: CAC3297 COG1876 # Protein_GI_number: 15896541 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase # Organism: Clostridium acetobutylicum # 79 247 67 233 241 110 34.0 3e-24 MERMMTGDGRVRTFAECRNRRNRRTLLRVSVVLGVLLAAILALLFCLGRFAGRGPFAPGV AQAKYSPSSWSLIVVNRWNRIPDDYPAPKLTRLSNGESVDSRIYPDLQRMFDDMRAAGLH PEVTSAYRTEAVQRQLLDEKIFLYQNEGASKEEARRQASQWVAEPGTSEHELGLAVDINA SGATGTKDSVNEHQWLADNAWRYGFILRYPRGKTDVTGNAYESWHYRYVGAEAAKAMHES GQTLEEYAK >gi|197324945|gb|DS990229.1| GENE 1069 1122465 - 1124066 2184 533 aa, chain + ## HITS:1 COG:ML1816 KEGG:ns NR:ns ## COG: ML1816 COG0488 # Protein_GI_number: 15827973 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium leprae # 3 530 2 542 545 558 55.0 1e-159 MAIEAQGLEIQIGARTLLHPTDFHVAKGDKIGLVGRNGAGKTTLTRVITGDMLPTSGKVR VSGKLGYLPQDTHAADQEQTALDRMMSARDIASIISRIRKAEKDMTNPDPDIMTKAMNRY DKAMQDFDKAGGYAAQSEAIAMADSLGLPQDVMQRPLGTLSGGQRRRIELARILFSDADT LILDEPTNHLDADSIEWLRGFLKKYEGGFLVISHSTELLDEVVNKVWHLDAQTGQIDMYS LGWKAYLHQRVVDEERRRREREVAEKKADRLMKQGIRLHAKATKAVAAQNMMRRAERLLS ETSDAQKQDKVADIRFPEPAPCGRTPIMAKDISKAYGSNIVFAGVNLAVDKGSRVVILGY NGAGKTTTLRLLAHIEDPDTGVVEYGHGCKIGYFAQEHDTLDLNATVLENLTHVAPELND TQARSILGSFLFSGDDAFKPARVLSGGEKTRLALATLVTSRANVLLLDEPTNNLDPASRD EILKAIAKYEGAIVLVTHDEGAVQALNPERVLLMPDGDEDLWNDSYLDLVAEE >gi|197324945|gb|DS990229.1| GENE 1070 1124477 - 1125499 1604 340 aa, chain - ## HITS:1 COG:BS_galE KEGG:ns NR:ns ## COG: BS_galE COG1087 # Protein_GI_number: 16080937 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Bacillus subtilis # 4 340 3 339 339 429 60.0 1e-120 MTTILVTGGAGYIGTHTDVELLNKGYDVVCVDNYSNSSPKALDRVEEITGKTVKRYEGDV RDEALMDRIFTENDIDWVIHFASLKSVGESVAKPIEYYDNNLNSTIVLLKAMRAHDVKKV IFSSSATVYGTPKELPLTEESQIGGTTNPYGTTKFFEEQILRDVHVADDSWTVVILRYFN PVGAHESGLIGEDPKGIPANLTPYIAKVALGELKEVQVFGDDYDTPDGTGVRDYIHVVDL AKGHVAVIDKVESPGVFTYNLGTGHGYSVLEVIKAYEKAAGHAIPFAIKPRRPGDIAACY ADSSKAERELGWKAELGIDDMAASSMNWQTKNPSGYRDAE >gi|197324945|gb|DS990229.1| GENE 1071 1125545 - 1127059 2127 504 aa, chain - ## HITS:1 COG:BS_galT KEGG:ns NR:ns ## COG: BS_galT COG4468 # Protein_GI_number: 16080870 # Func_class: G Carbohydrate transport and metabolism # Function: Galactose-1-phosphate uridyltransferase # Organism: Bacillus subtilis # 17 499 2 504 513 276 34.0 5e-74 MTTEEKKDDCACGGLDAVYASIDALVDFARKRLELDPRDADWTRNRIFELFSLDSYHPTG ATSDDTLPDDLLTRFRAAAVAAGLFDADEGPVYADIVMGMLSGTPSAVQNRFEAVEREHG GMEAMRWFYDYCVANNYVKKGVLDKNPRFDSHGLVITINLAKPEFKNMKKAAAGNSVAGG YPACTICHENEGFAGRNKRTLRTIPATLGDEPWFWQFSPYGYFYQHGICVNDEHTPMHVS RSTFGHLLDFVDRFPGYFLGCNAALPRIGGSVLAHDHYQGGGELLPMHKAAAWATMTLPE YPDATIEILDWPGTAVRVVAKSRDTIIEVCDKIREGWINYSNPELDIICEGEDGKRSAVS PSAIITERGYEMSLIFRNNSVSEELPEGIFHAHPEFWPVKQEPIGLIEAQGLFILPGRLI NQLGLIEDALAEGNPLPEEVGEFTLEWDELTATLNGERDRDAIHAAVQDELGSVCERILG NTAVFKHKELTRDFMEGLGFHTQH >gi|197324945|gb|DS990229.1| GENE 1072 1127059 - 1128147 1607 362 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0997 NR:ns ## KEGG: BBIF_0997 # Name: not_defined # Def: mucin desulfatase # Organism: B.bifidum # Pathway: not_defined # 1 362 1 362 362 704 100.0 0 MTDIDPKLAAIVDQFAIDGDVKGITAYGDGHINVTFLINTDQHRYILQKMNTDIFPDTVH LMRNIELVTAYLRSKNQETLDIVPTKDGASYIENEEVDGAWRIYKFIEGTISYNLVPNAD VFRESGAAFGEFQNFLAGFDASQLTETIAHFHDTPSRFRDFKAALEADKMGRAETCKPEV DFFLAHEDQYSRIMDGLADGSVPLRVTHNDTKLNNILMDAKTGKARAIIDLDTIMPGSML FDFGDSIRFGASTALEDEKDLDKVHFSTELFRAYAEGFVGKVRDSITDKEAELLAFAGNM MTMECGMRFLADYLAGDTYFATKYPEHNLVRARTQIKLVQEMEQKADEIRAIVDDVMERT AR >gi|197324945|gb|DS990229.1| GENE 1073 1128437 - 1129591 1141 384 aa, chain + ## HITS:1 COG:VC0993 KEGG:ns NR:ns ## COG: VC0993 COG1940 # Protein_GI_number: 15641008 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Vibrio cholerae # 26 362 12 376 404 119 26.0 1e-26 MTSYANTISFPLHTPGRTTKASPADVRRNNRSLVFGLLFPNGQLSRADLGRQTGLSRVAI SRVANSMLDEGLICENGFDVNASGKGKRGTLLSIDTSRLHIISVDLSQEHLVQGAVTDLL GTPQQRMEMALGPDNDINADMIVQLVDQLRTDIDADTIIGIGIAATGVVEDGVIRESTVL GWRDLDLRGMLERRFGFPVTISNDVVCSMLAERFFGHGDKSMLFIKIDRGIGAATLIDDV TVIGQNHAGGEIGHISLDPESGVLCPCGKRGCLETMITSPVIRERIRRASTLEEQLDIIR SCGEQLAAALAMPIGLLDINDICVYGPPDIVNAAFLEATQRRVDMVSSSKFHKHTSVRRC QVGSDIALRGSAIDVVHHYIENGH >gi|197324945|gb|DS990229.1| GENE 1074 1129734 - 1130675 314 313 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 13 310 2 313 323 125 27 6e-27 MTVQDTAQQTPADRFRVGIDIGGTKIEAVLVDPQDNVRNDVRIPARRGNAQVIDDVVSIT HEVAGDLFDQVATVGIGIPGQVNPETGRVDNVVNLDIDTLELGTEAGKRLGIPVHVENDV NAAAVGAARMVGGSHPEGTIVFLNFGTGLAAGIVVDGVVQHGFSGAAGEIGHIPIDPNRF PCPCGQSGCLETVCSGASVGRHWPVEGKPPMPDLIECARRGEPDAQRILVMVTHAIVDAV QIVAQSYDPRMIIFGGGMAKTGQPLIDVTLDELRVRERTCPFLTGLHLGERIKLAQLDQP VGALGAAWAAPEA >gi|197324945|gb|DS990229.1| GENE 1075 1130904 - 1132343 2049 479 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1000 NR:ns ## KEGG: BBIF_1000 # Name: lnbP2 # Def: lacto_N-biose phorylase # Organism: B.bifidum # Pathway: not_defined # 1 479 273 751 751 984 98.0 0 MPRKAQRDWIDFLSGFVRANVKKLADMSHEAGKEAMMFLGDQWIGTEPYKDGFEDLGLDA VVGSIGDGTTTRMIADIPGVKYTEGRFLPYFFPDTFYEGNDPSIEGLDNWRKARRAILRS PISRMGYGGYLSLAAKFPKFVDTVTHIADEFRDIHDRTGGVAAEGELNVAILNSWGKMRS WMAFTVAHALPNKQTYSYYGILESLSGMRVNVRFISFDDVLEHGVADDIDVIINGGPVDT AFTGGDVWKNPKLTETLRAWVRGGGAFVGVGEPSSLARFQAGRFFQLADVLGVDEERYQT LSVDKYFPAVTPEHFITADVHVDPAAREAWEKAGYRIPLSGCGGGQGIKPLGGIDFGEPI ANTFPVNEDVTLLRADGGQVQLAVNEYGKGRGVYISGLPYSAANARLLERALFWASHNED KYTAYSSTNPECEVAVFPDAGQYCVINNTDRPQSTDVALPDGSVEHFDLDQSAIAWRNL >gi|197324945|gb|DS990229.1| GENE 1076 1132719 - 1133159 547 146 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1055 NR:ns ## KEGG: BBPR_1055 # Name: lnbP # Def: lacto-N-biose phorylase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 145 1 145 751 296 100.0 2e-79 MTSTGRFTLPSEENFAEKTKELAELWGADAIRNSDGTHLDESVLALGKKIYSAYFPTRAH NEWITLHMDETPQVYLLTGRVLAEADIVDVPLMDGFFEEQLKPNRDADPHKYWEVVDRTT NEVVDASLWTLDEDTDTVHVSGATPS >gi|197324945|gb|DS990229.1| GENE 1077 1133411 - 1134361 1242 316 aa, chain - ## HITS:1 COG:BH1926 KEGG:ns NR:ns ## COG: BH1926 COG0395 # Protein_GI_number: 15614489 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, permease component # Organism: Bacillus halodurans # 35 315 12 284 285 139 33.0 7e-33 MSSATAEVRANKKRERRLEKQREAAQHDLPRSMRPSPAVKTLTVIVLVLALIYFLFPIYW AIIASTKTPSQMTSGNGLWFSVSLDQIPNAVATNYSKLLGWTRGNFWRWVLNSLIYSGVS ALIGTIVSVMAGYATAKFNFRGKNVAIGIIMACMLMPAALLTIPQYSIFHALKLTNTMAS IIIPCCVSPFGFFLGRTYAQSSVPDELLEAARIDGASEARIFFTIVLRLLAPAMVTIFLF LFVATWNNFLLPLMMVSSDTLKPVTLGLYGMVSLATFTDRGALMMGALLGVLPVIVIFLG LQRYWQSGLAAGAVKG >gi|197324945|gb|DS990229.1| GENE 1078 1134361 - 1135332 1174 323 aa, chain - ## HITS:1 COG:XF2447 KEGG:ns NR:ns ## COG: XF2447 COG1175 # Protein_GI_number: 15839038 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, permease components # Organism: Xylella fastidiosa 9a5c # 27 268 2 241 293 115 30.0 9e-26 MTASITQAKGAAPKRAAAKPKRSKAFKRENRTGWAFMAPFAILFAFVFLLPIIWAVYSSF FRQVSQGGGLYGGGELVNEFVGFQNFQYVITSGKFWTGVGHVLLYTVAQVPIMIIAALAL AMVIDSFVVKHVTGFRLGYFLPYAIPGVVASIIWVYLYNGQISPIVKGLESIGIHVDFFA NNVVLGSMANITTWTFTGYNMLIFLAALQAIPHDLYEAARIDGANGFQVAMKIKLPNVRG AALLAMLLSIVGTIQLFNEPQIMSTADPGISKAYTPMMMAMNTSQGTLTPSGDGPASAIA IVMALIAGLLAVVYTLAERKVNE >gi|197324945|gb|DS990229.1| GENE 1079 1135509 - 1136816 2040 435 aa, chain - ## HITS:1 COG:SMb21595 KEGG:ns NR:ns ## COG: SMb21595 COG1653 # Protein_GI_number: 16264783 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Sinorhizobium meliloti # 59 337 45 323 410 84 26.0 6e-16 MVAKKRLLAGLASLTVMGIALAGCGPSTNNGSNTPKDEKVTITYMHRLPDKKGMTLVNDI VAKWNKDNPNIQVKATKFDGAAQDMIKKLATDVKAGAAPDLAQVGYAELPEVFSQGLLQD VTEEAAKYKDHFAEGPFSMMQIGGKAYGLPQDTGPLTYFYNAKEFEKLGITVPQTADELI ATAKKTAAQGKYIMTFQPDEGMMTMSGASGASGAWYKTEGNAWKVDTQTAGSKAVAKVYQ QLLDDKSALTNPRWDPSFDASINKGQLIGTVAAAWEAPLFISSAGGTGKGEWKVAQLPDW FGNGTKTGSDGGSGVAVLKGSKHPAEAMKFLDWFNTQVPDLVSQGLVVAATTEAAKTPAA WSEFFSNQDIMAEFKKANDNMASFSYIPGFSAVGAAMNETAAKAATGDAKVSDIFDTAQK TSVEALKNAKLPVKE >gi|197324945|gb|DS990229.1| GENE 1080 1136904 - 1136981 66 25 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLTGVRCCTPWVTICVTGDTTQMLM >gi|197324945|gb|DS990229.1| GENE 1081 1137309 - 1138922 1658 537 aa, chain - ## HITS:1 COG:ML1269 KEGG:ns NR:ns ## COG: ML1269 COG0147 # Protein_GI_number: 15827651 # Func_class: E Amino acid transport and metabolism; H Coenzyme transport and metabolism # Function: Anthranilate/para-aminobenzoate synthases component I # Organism: Mycobacterium leprae # 36 537 11 507 529 426 48.0 1e-119 MSERRIDDAGVAGGLHDDGAACSVEHLEWGGTWPDRAQFHRLADAGYRVVPIVRRLLADS LTPVGFYERLAGGRSGTFILESAEYGGSWSRYSFIGVNSIAQLRSDHGKANWLGQVPAGV PTEGDVIEVAHAALKVLKAPHVAGLPNLTSGLVGSVGWDAIRHWEPKLRAEAPDETGQPE VTLALATDIAVVDHVSGSVWLIANAVNVDDRPTRADAAYDEAIERLDAMQRKAATPVAGE ARVSVLDRSLPQPQLRFRTAKAEYERWVEETKRHIVDGDVFQTVISQRLDLDSPADPFDV YRVLRTLNPSPYMYFMTLTDAEGRDFNVIGSSPETLIKVDNGHAMTFPIAGSRPRGATPE EDERLAKELLADPKERSEHIMLVDLSRNDLSKVCLPSSVEVVQLMDIKRFSHIMHICSTV TGTVDPNLTTFDVFMSAFPAGTLSGAPKPRAIEIIDELEAADRGIYGGTVGYFDFSGNMD MAIAIRTAFLRDHQASVQAGAGLVLDSVPATEWQETRSKAEASVEAIQIAAQLRSVE >gi|197324945|gb|DS990229.1| GENE 1082 1138922 - 1139347 542 141 aa, chain - ## HITS:1 COG:CAC0942 KEGG:ns NR:ns ## COG: CAC0942 COG0139 # Protein_GI_number: 15894229 # Func_class: E Amino acid transport and metabolism # Function: Phosphoribosyl-AMP cyclohydrolase # Organism: Clostridium acetobutylicum # 31 125 13 113 115 135 60.0 2e-32 MKDMTDTQSTIDYDNTDELDPRIAARLKRDARGLVAAVIQQYDTHEVLMVGYMNDEALRR TLTTGRVTFWSRSRQEYWRKGDTSGHVQYVKSLALDCDGDAILVQVDQVGAACHTGKRSC FEEGGPLPVVVGDRTAEQENA >gi|197324945|gb|DS990229.1| GENE 1083 1139420 - 1140193 1047 257 aa, chain - ## HITS:1 COG:Cgl2041 KEGG:ns NR:ns ## COG: Cgl2041 COG0107 # Protein_GI_number: 19553291 # Func_class: E Amino acid transport and metabolism # Function: Imidazoleglycerol-phosphate synthase # Organism: Corynebacterium glutamicum # 1 256 1 257 258 310 69.0 2e-84 MSLAVRVIPCLDVDAGRVVKGVHFENLRDAGDPVELAGEYYRQGADELTFLDVTASSSHR QTMIDVVSHTAEQVFIPMTVGGGVRTPEDVDSLLRCGADKVGVNTAAINDPTLISRVADR FGNQVLVLSVDARREQGEQHTQSGFEVTTMGGRKSTGIDAIWWVKRAEELGAGEILLNSM DADGTREGFDLEMIKAVRREVKIPIIASGGAGKAADFPPAIAAGADAVLAASIFHYGLVT IREVKQALRSAGYTVRL >gi|197324945|gb|DS990229.1| GENE 1084 1140343 - 1141533 1426 396 aa, chain - ## HITS:1 COG:MT2947 KEGG:ns NR:ns ## COG: MT2947 COG0820 # Protein_GI_number: 15842421 # Func_class: R General function prediction only # Function: Predicted Fe-S-cluster redox enzyme # Organism: Mycobacterium tuberculosis CDC1551 # 31 388 8 361 364 377 55.0 1e-104 MTTGHAQDAEQPETGITPGDKGAFRDVLSKDHARRGKPPVHLVDMTPDERVAKAKDLGLP KFRVKQLANHYFGRLETESEAFTDLPAATRGDIVEAFFPPLIDEVTHQVADQGTTIKTLW RLFDGSHIESVLMRYPNRTTLCISSQVGCGMGCPFCATGKLGLTRNMSTGEILEQVRVAA RMMRDGEVAGGPGRLSNIVFMGMGEPMGNYRSVLSAVRQISAMPPEGFGISARNITVSTV GVVPGIRKLAAEGIPVRLAVSLHAPSDALRDELVPMNKRFNTTQVLDAAHDYFLSSKRRV SIEYALMRGINDQAEHARLLAKRLNHYGDDWAHVNPIPLNPIEGSRWTASKPEDEQQFLD ILHHAGITATLRDTRGSDIDGACGQLAAKTKEAFAA >gi|197324945|gb|DS990229.1| GENE 1085 1141604 - 1142590 1436 328 aa, chain - ## HITS:1 COG:Cgl1975 KEGG:ns NR:ns ## COG: Cgl1975 COG0575 # Protein_GI_number: 19553225 # Func_class: I Lipid transport and metabolism # Function: CDP-diglyceride synthetase # Organism: Corynebacterium glutamicum # 23 316 9 269 285 114 30.0 2e-25 MEHNDQLHVEAEEALANINKKTGRNMPQAVATGAVLVIIILASLLIRIDVFVLLIVVFMV LALWELRVDFATVGLHIPVVALWLCSAAILLGTYYSPYHFGTMALLTMATLMLVAILATA RFSFGNWLSLAVASKLSSSDAAAREQSSFNHEKGELHHSRLSHVAVSILTVLYIPTLASC IVLSLVFNGHPVAHAITLVFLPALSDTGGLFFGAWFGKHKLSPRISPKKSVEGLFGSILF AMIGAFAVFFCTYDGAVWASRWWVPIVMGVLTGVAGTFGDLCASMLKRDIGIKDMGHLLK GHGGVMDRVDSILMCAPFLAGLLWIVGM >gi|197324945|gb|DS990229.1| GENE 1086 1142707 - 1143261 948 184 aa, chain - ## HITS:1 COG:Cgl1976 KEGG:ns NR:ns ## COG: Cgl1976 COG0233 # Protein_GI_number: 19553226 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome recycling factor # Organism: Corynebacterium glutamicum # 7 184 8 185 185 177 53.0 9e-45 MANPVEQAKEQMNKSVENTKENFAGIRTGRANPALLNGIVVDYYGAPTPLKAVASIGVPE PRTLSVTPFDVSQASKVEKALRDSDLGVNPNRDGNVIRITMPELTSERRKEYVKLAKSKA EDGKVAVRNIRRKAKETIDKSVKDGEMGEDEGDRLLKELDKVTKQVTDQLDALFETKQKE IMEV >gi|197324945|gb|DS990229.1| GENE 1087 1143342 - 1144088 1042 248 aa, chain - ## HITS:1 COG:ML1591 KEGG:ns NR:ns ## COG: ML1591 COG0528 # Protein_GI_number: 15827835 # Func_class: F Nucleotide transport and metabolism # Function: Uridylate kinase # Organism: Mycobacterium leprae # 12 242 50 279 279 270 63.0 3e-72 MADGVAADQPRRVLLKLSGEAFGGGKVGIDTQVIRRIAEEIVPAVRQGVQVAIVVGGGNF FRGAELQQAGIDRSRGDYMGMLGTVMNCLALQDFLEQEGQATRVQTAITMGQVAEPYIPL KAIRHLEKGRVVIFGAGAGMPYFSTDTVSIQRSLEIHCDEVVMGKNGVDGVYTSDPRKDA DAKRFATLSYNRALVDNLAVMDAAALSMARDNRKRIRVFGLEEAGNVTRALLGEEIGTLV STAESTLA >gi|197324945|gb|DS990229.1| GENE 1088 1144201 - 1144881 665 226 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1011 NR:ns ## KEGG: BBIF_1011 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 3 226 1 224 224 420 98.0 1e-116 MTMISSLMGSGTAQPTCRRNEWPKNRMASDRTDRHALIMPGTGYNCDRPLLYYCAMALAD AGWFVERLDVDADLSKTPAPRIFSMLSGAVDDWLDGIPRRSSPSSQPRTLVVAKSLSTFI YPHVSRLGVPMALLTPVLSPADFDPTRSVIPVPGDDDYEPGSAPEPLICAGTADPLYRSD RAHRLSGLVHEYPQTNHSIEVPGRWRTSASYLDDVVARVEEFAESL >gi|197324945|gb|DS990229.1| GENE 1089 1144766 - 1144981 167 71 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283167|ref|ZP_03646489.1| ## NR: gi|224283167|ref|ZP_03646489.1| hypothetical protein BbifN4_04994 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 13 71 1 59 59 107 100.0 3e-22 MISACRSVLSDAMRFFGHSFLRQVGCAVPLPINDEIIVMIPHMIFRYSCDCMLSAGMAAP AMPGMTKAADA >gi|197324945|gb|DS990229.1| GENE 1090 1145084 - 1145935 421 283 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|42631241|ref|ZP_00156779.1| COG0264: Translation elongation factor Ts [Haemophilus influenzae R2866] # 1 283 1 266 283 166 36 2e-39 MAAITAALIKQVREDTGAGMMDVKKALTEAEGDVARAKEIIRAKGIQAAGKREGRKAQEG TIASKVIESAEGQTGYAVELNSETDFVAKTPKFVEFADTVLGYAVAADANNADELLASNA EDGTVKVAVEEAAALFGEHVKVGQFAKISGPHVEIYAHKKSVEMPPSIVAMIATDEAGAK VAHEAALQISAMGAKWLSREDVPADVVESERRVATEKSLAEGKPEKIVPKIVEGRLNAFY KEVVLLEQPFVKDPSKTVGKLFEEVGGKAVAFARIEVGKGEEE >gi|197324945|gb|DS990229.1| GENE 1091 1146012 - 1146836 1375 274 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224283169|ref|ZP_03646491.1| 30S ribosomal protein S2 [Bifidobacterium bifidum NCIMB 41171] # 1 274 1 274 274 534 100 1e-150 MAQITMSEMLKAGVHFGHQTRRWNPKMKQYILMERNGIHIINLFKSLELIDKAYDFIKAT VAHNGTVLFVGTKKQAQEAVQTQATRVNMPYVSERWLGGMLTNFQTVSKRVSRLKELEEM DFSDVHGSGLTKKELLLLEREKDKLEKQLGGIRNMVRTPSAMFVVDINKESLAVEEAHKL GIPVVALVDTNTDPESVDYPIPANDDAIRGIELLTSLMADAVADGLLERSGRAAKAEGET EAEQPMAAWEKELLTEGASAEAAPAAEAEEAKAE >gi|197324945|gb|DS990229.1| GENE 1092 1147037 - 1147525 585 162 aa, chain - ## HITS:1 COG:Cgl1563 KEGG:ns NR:ns ## COG: Cgl1563 COG0242 # Protein_GI_number: 19552813 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Corynebacterium glutamicum # 1 160 1 165 169 127 41.0 8e-30 MAIREIRTVPDPVLRTPCETIREITPSVRRLVQDLLDTVDDPGRAGLSANQIGVGLRAFS YNINGKIGYVLNPVLEEKSGEQYGDEGCLSVPGLWYKTRRADYARVRGIDLDGNEVVLEG SGLMGRMLQHETDHLDGHVYLDRLEKTERREALRYMREHAAK >gi|197324945|gb|DS990229.1| GENE 1093 1147526 - 1149550 2610 674 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 596 1 594 600 442 41.0 1e-123 MLREYTVDTIYQTTDLDTIYSLLAKRCERDPDDLIAQWQDDETRQWHDVSAGQMNDRVRE VAKGLLGLGVKPGSMVVIYAATCYEWGVVDFACASIGAVSVPVYETDSPKQTGDIVAEVE PVIAFAGDDPHAQILEQIRAHSESLRYVFNFKANGLDAVADFGESVSDEELDKAIGRVRA DDLFTIVYTSGSTGKPKGVMLSHRNFNHTVYNGYEVLNDMLYQPSRLLLFLPLAHCFARY IQYVAIGSHGVVGYIPSAKRLLADLRGFKPTYLLGVPRVFEKVYNAASQKAGAGLKGRLF AKAFDHFVQWSKDEMTGGHHSLGARTQHSFYMQTVGSSIRSALGPNMKWLACGGAPLNAD LAHFFNGFDGITFIQGYGMTETAAPCLVNFQDANEVGSVGRPGCISIRLADDDELMIKGP NVFLGYYKQPQRTAEALTSDGWLHTGDLATIDDRGFVFITGRKKDIIITAGGKNISPAPM EDVINTCPIVAHAVVIGDGRPFIAALIELDAEMTRSWLASQNLDIDAPMSEIATNDAVRA LVQQYIDKANGNVSRAESVRKFVILDEEFNQEDGTLTPSMKVVRPKVLQRYADVIDNMIY APKNAAKPLPATVKILDMTAETVKQSSESVKQAFDRAKGKIRFMKDDEAESGSPEQEDSV GDAASDSNDTSEEK >gi|197324945|gb|DS990229.1| GENE 1094 1149567 - 1149695 64 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAAYRHAAMRNISSGLRGVYHPMSVIVHSQRHPIWRSTMFDQ >gi|197324945|gb|DS990229.1| GENE 1095 1149626 - 1150120 351 164 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1016 NR:ns ## KEGG: BBIF_1016 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 164 1 164 164 334 99.0 6e-91 MEQPTYHYARENPPCPVPSLDGYVIIESSDVPVPYHITSCGAGSINAAQGHSLAVSSARI ACMSADIMRGQLHAGKLRRAVTGPCLKKLETMAYLLDNHMQSNPELKAKLRYLPVVPRMM SGMFINPTTFEISTHLTIGVQNYWSNIVLRQMGCRWLCTMTDIG >gi|197324945|gb|DS990229.1| GENE 1096 1150276 - 1151397 1318 373 aa, chain - ## HITS:1 COG:Cgl0588 KEGG:ns NR:ns ## COG: Cgl0588 COG0516 # Protein_GI_number: 19551838 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 1 369 1 374 374 317 49.0 2e-86 MSQEIEIGLGKKARMAYALDDVSIVPSRRTRDSQDVSTSWQVDAYEFDVPVIGAPMDSVT SPATAIAMGRLGALGVLDLEGLWTRYDDPQPLLDEIAQLPDDVATERIQEIYREPVKPEL ITRRLHEIRDAGVTVAGALSPQRTQQFYSTVVEAGVDLFVIRGTVVSAEHVSLGHEPLNL KKFIYDLDVPVIVGGAANYTAALHLMRTGAAGVLVGFGGGAVTATRTTIGVHAPMATAIA DVAEARRDYMDESGGRYVQVIADGGMGDSGSFVKALAMGADAVMLGAPLARATEAPGGGK HWGAEARHQTLPRGSRTDVGTVGSLEQILFGPSHRADGQVNYIGALRRAMASTGYVDVKS FQRCSVVVNPYHV >gi|197324945|gb|DS990229.1| GENE 1097 1151557 - 1152777 2044 406 aa, chain + ## HITS:1 COG:BMEI0791 KEGG:ns NR:ns ## COG: BMEI0791 COG0538 # Protein_GI_number: 17987074 # Func_class: C Energy production and conversion # Function: Isocitrate dehydrogenases # Organism: Brucella melitensis # 1 406 1 404 404 627 74.0 1e-179 MAKIKVEGKVVELDGDEMTRVIWKDIKDRLILPYLDVDLDYYDLGIENRDATDDQVTIDA AKAIQREHVGVKCATITPDEARVKEFGLKKMWKSPNGTIRNILGGTIFREPIVMSNVPRL VPGWTKPIVVARHAFGDQYKATDFKVPGAGRLTVTFTPEDGSEPIEHVVYDYGQDGGVAQ VQYNVNDSIRGFARACFNYGLMRHYPVYLSTKNTILKAYDGQFKDIFAEVFETDYKDKFA EAGLTYEHRLIDDMVASSLKWHGGYIWACKNYDGDVQSDSVAQGFGSLGLMTSVLMTPDG QTVEAEAAHGTVTRHYRRWLKGEKTSTNPIASIFAWTGGLKHRADLDGTPEVRHFAETLE KVIVDTVEGGQMTKDLAMLVGPDQAWLDTEGFMNALDENLSKALTA >gi|197324945|gb|DS990229.1| GENE 1098 1152945 - 1154558 1705 537 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1074 NR:ns ## KEGG: BBPR_1074 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 537 1 537 537 904 100.0 0 MSGRRMVSCLKLIAAAMATGLLLTTAGCASTDDTNTPDGGTVTQSTGAVAIFTPSDGITL SQHTPLNKWAKLVPDITSELKKQGFKSANITTTTSSDLAKQSQDIQDYVVNHAVSAQSGK NNANKKDGADEKEITLIVAPAAETQTSTRQYGDYVSQTSGTATDRTGSDEAGSTDASEST DTSESANASSSDNASDSTDTESMPRMANALQLAKDSGMHVVLVANPVKDFTPDAFVELST AERIGQIQASKLADKLQLDTISKDNPKAVEILLPYTASADGSDDEFAKEAFAGAWSVLQP YFKKGTAYSPSGLLTADTTDGQWESVAFKIDKDSRITDEITNRLKQKDSASHTRIDGIIA MNDYVASGVVDALDHLGYTGSAADINPSITLPGIVGNITGKQDLHRKKVPDPIKAPENDG DAANDGSASEKARDTQWPIITGYGAYVDELPQLVSGHQWMTAVEDRKGAATQLAQMCLKI NQGTAVKSPQNLTKGTYPGVAGKNMPTLRPDLVAVSASNLKSTLIDPGYITLADAGM >gi|197324945|gb|DS990229.1| GENE 1099 1154705 - 1156519 2021 604 aa, chain - ## HITS:1 COG:ML0887 KEGG:ns NR:ns ## COG: ML0887 COG1022 # Protein_GI_number: 15827409 # Func_class: I Lipid transport and metabolism # Function: Long-chain acyl-CoA synthetases (AMP-forming) # Organism: Mycobacterium leprae # 2 595 1 594 600 463 41.0 1e-130 MLKEYTQPVTKPIDGDKNVFSVLVERAERKPDEPLVSYKDGTGSWRSFTATEFRDKVIAL AKGLIARGVMPGDAVSIISSTSWQWAALDMAIMSIGSLTVPVYETNSPAQVATIFNDSQV TMAFAENDAQRDKIESVRSRCSTLKDVYVIDFGALNTLEEYGRGVSDEEFWERERLVKGD DLATIVYTSGSTGMPKGIELSHGNFVYVTYAGTQSMPDIAYGRDRRLLLFLPLAHAFARY MVLYCFAGDVELGLSNNLKTILSDFGEFKPSFILAVPRIFEKVYNAASQKAGAGMKGRIF AKAAATAREWSHAQQEGNGFSASLRMRHAMYDRLIYRTIMGVFGGHCEYAVSGGAPLDGA IAHFFNGVGLPLLEGYGMTETCAPAMVNPTKGYRIGTVGLPLQGVSVGLGEDGELCIKSR AVCVGYHNHPEITQSQIVDGWLHTGDLGDIDDDGFVTITGRKKDLIITAGGKNVSPGILE ASVMTSPVVDQCVVIGDRKPFIAAIVSLDLDETNAWLAAQGVEQVSDLAEAVRNPIVYAE VERAVNAANDLVSRAESIRKFEIVPEPFTEENGLLTASMKARRQAVIDHFGELIDTRIYA PKGR >gi|197324945|gb|DS990229.1| GENE 1100 1156630 - 1157319 286 229 aa, chain - ## HITS:1 COG:Cgl1980 KEGG:ns NR:ns ## COG: Cgl1980 COG0739 # Protein_GI_number: 19553230 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane proteins related to metalloendopeptidases # Organism: Corynebacterium glutamicum # 101 228 44 162 164 77 34.0 2e-14 MLNDDLDGQRGAWHHPQVRYDRHAIRRRQFALRRRERCKRTMIRLCCMSVAVMFAAMMNW ALLRVPSASAGEEVFAAVTLCAGRQAACRAVWLWPVGQPAVIADFDPPDRPWLSGHRGVD LQASDGDELYAPADGIISFAGSVGGKSVVSVNHGDLVSTFEPAHTEGVAGTAVRRGDVIG EVGGASDHCDGRCLHWGVRRVRLQNEGTATTYLDPLARVRPMRIGLKPD >gi|197324945|gb|DS990229.1| GENE 1101 1158267 - 1159337 664 356 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|227411248|ref|ZP_03894449.1| (SSU ribosomal protein S18P)-alanine acetyltransferase [Eggerthella lenta DSM 2243] # 1 336 536 873 891 260 41 5e-86 ETNRTGDATMSEPIVLGIESTCDETAAAIVQGRTLRSNVVASSMEEHARYGGVIPEIASR AHAEAFVPCVSQALSDAGLGLGDVDAIAVSAGPGLAGCLTVGVSGAKALAWAANKPLYGI NHVIGHIAVTQLQFGPFPKDTLALIVSGGHTSLLHVRDVARHVDVVGTTLDDAAGECFDK VARLLGFPYPGGPHIDRHAQLGDPKAIKVPQGLTQGKAGAAHPYDFSFSGVKTAVARWIE EQQAAGRDVPIDDVCASLADSVATVLARKAMRGCEQYDSKTLIVGGGFSANSQLRAKLLE YGERAGVEVRIPRLKLCTDNGAMVAMLGVNLVEAGEAPSSPDCPIDSAMPMNKICM >gi|197324945|gb|DS990229.1| GENE 1102 1159307 - 1159888 553 193 aa, chain - ## HITS:1 COG:BS_ydiD KEGG:ns NR:ns ## COG: BS_ydiD COG0456 # Protein_GI_number: 16077660 # Func_class: R General function prediction only # Function: Acetyltransferases # Organism: Bacillus subtilis # 30 153 30 145 151 72 34.0 6e-13 MLRELDDIGRETAVGAIRALEVELFGNHAWSEASIRQELDAPARVYVFDVDEADGRDTDR EPAIRGFAGYWYDGDDAEIMDIGVSKTHQRQGIAVAMMNHLISRARRQGARRMLLEVSVV NDPAIALYHRFGFQRIGLRKRYYQPEGIDAYVMALDLEPRIVGFSGNGGVAGAAGDTSAA GDMTKQTGQETQP >gi|197324945|gb|DS990229.1| GENE 1103 1159888 - 1160754 808 288 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1080 NR:ns ## KEGG: BBPR_1080 # Name: not_defined # Def: glycoprotease protein family (EC:3.4.24.57) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 288 1 288 288 531 97.0 1e-150 MQATDGCTLVIDTSYGSTVGVVGHEPIVETDSRTHVEKLQVNIARAMDAAGLGPADIGCI VVGVGPAPFTGLRAGLVTAKALAFATGARLIGQNILDPQDAMLRAALRGDAVIADAAGFL ADVSHTAQNGQADGRLEPEHHITLCVNDARRKQLYFSLNHEAGVMGSETDSCHWIAMDID YPGHIVERVNAEVRRRAEIGGMRYIVDVVGHGAARYADAWQSLDALGSVVEGSILDAGAA GLAMFAEMALEHADDEAPVEPLYLRRPDAEVPSPLKHVLNHAGAQRAD >gi|197324945|gb|DS990229.1| GENE 1104 1160814 - 1161467 604 217 aa, chain - ## HITS:1 COG:SP1944 KEGG:ns NR:ns ## COG: SP1944 COG0802 # Protein_GI_number: 15901768 # Func_class: R General function prediction only # Function: Predicted ATPase or kinase # Organism: Streptococcus pneumoniae TIGR4 # 34 175 6 123 147 83 38.0 3e-16 MKETMETAETGNAGVTRNQGADAAHPVVVRVPTDDDMRELGRRVALLLHGGDVLLLSGPL GAGKTTFAQGIGAGLGITEPIVSPTFTIARELDGRFADGSHAHLVHVDAYRLGGDAYAPG QDVEERLLDELESLGLDEELEDPGANTVILMEWGEQMASTLAPERLEVHIDRPLDDGQDD KTAERQPTSDGTRVVTLVPVGPAWDGARISRFTTPTA >gi|197324945|gb|DS990229.1| GENE 1105 1161579 - 1162556 1160 325 aa, chain - ## HITS:1 COG:Cgl2295 KEGG:ns NR:ns ## COG: Cgl2295 COG1466 # Protein_GI_number: 19553545 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, delta subunit # Organism: Corynebacterium glutamicum # 13 324 20 330 331 115 27.0 1e-25 MANKAGSQAPFIIVFGGDAYLNKRTGRDLIRRALHDRPDAERIDLDATGCDQYAFDEAVS PSLLADVAVVVVDNLQNADDKLGESMVRYCRQACADPGASSIVICRHEGGVKGKRLLDQL VKAGACKETVADLKKPEAKLNFVLQIFEGEHRRVEPLAAQQLVAVLGERTGEMAAMCSQL CFDFDDDPITLDLVNRYLTSNPQVTGFSVADKAIAGRTAEAIIAMRSAVEQGTDPIALIG ALAMKLRTIAKASAVKAGTITQAQAKTNPWVLKNAMRQLSGWTSAGLGQCIRMLAWADEQ SKTNGGDPVYALERCIELISHKGRD >gi|197324945|gb|DS990229.1| GENE 1106 1162504 - 1164417 839 637 aa, chain - ## HITS:1 COG:Cgl2296 KEGG:ns NR:ns ## COG: Cgl2296 COG0658 # Protein_GI_number: 19553546 # Func_class: R General function prediction only # Function: Predicted membrane metal-binding protein # Organism: Corynebacterium glutamicum # 259 480 176 396 554 77 32.0 8e-14 MLPAALAAWMASAAAHQWWRWLTLMDDDPMSVTGYAIGALAVMLLPVVLVVPSLAAHGLI RPLRASLGDAVAVMAVAGLLSAAAAVTADSVRWHDAAHVQARDGPADVVAVVRVRSPAVS STVRGSDCQVDGRVVSLSIRRSPANPLSERSPVPSRADIRVLLSGDVCSALTDTAVYRFP GTLSTASYGRQPLWLTCDDMRVPDVVSAPSGTARIVKAMQQGLLRACDRLSDQARVLVPG LTVGVLGQDAVRVRDTASGAASHGSEEGLSSGTERVGGVDAAYAALLEEQFRRSGIMHLM AVSGGHFMVIAGLVHRLCSRVLAPRWATGLVMAVSDVMLAIVVFPSDSVLRALLMGLFGA AAVAAGRRGQSVSSLSWTVIIVLLIAPSMSVSYGFALSCAAVLGIVLFAGPLTDWLACML PRLLSAPLAMTIAAQSLTLPIQVLMDPQLPLASVPANLLVGPVVGFATMAGLVALFISWL MPQCGYVLAWIAGCGTSVMERVAAMVSDNEFATMPWAGGIPGALLMVLVESACATVLILA TRWLRLLRSDGSGDGGQSFRPRLRDRIRIWWSQTVTMFDGDTDGGDRPVPHTKVTAGAIP VASMTGAHDGSCPAVWEDGDHGKQGRLASPVHHRVRR >gi|197324945|gb|DS990229.1| GENE 1107 1164597 - 1165313 418 238 aa, chain - ## HITS:1 COG:TM1052 KEGG:ns NR:ns ## COG: TM1052 COG1555 # Protein_GI_number: 15643810 # Func_class: L Replication, recombination and repair # Function: DNA uptake protein and related DNA-binding proteins # Organism: Thermotoga maritima # 178 238 47 107 181 75 60.0 8e-14 MPSHGESHTEKHADVADSTTPAVEPISRLMGVRPDDGMRGRSAKRDVPRLRFRPFHAVTV MLVLTTALCASLTMLLQQSLRYVSAQSHNAAMQNAGGKETGIAETLPGGSDGSDSVNGDG SNSGGTGSDQENSGGAGDAESQGDGVESSAGSQAAQNGRSSQQGSDGSDDGATADTRIDL NTATAEQLDSIPGVGPVTAQRILDHRRSIGRFTSVDQLLDVSGIGAKTLTKIRPWVRV >gi|197324945|gb|DS990229.1| GENE 1108 1165290 - 1165481 93 63 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTLAMRRHRSGKIPRWRRRRRRHARSGIRRDRCSDPDYVGHGRNPGVAAIVHAAQPPSRR LIP >gi|197324945|gb|DS990229.1| GENE 1109 1165598 - 1168576 4642 992 aa, chain - ## HITS:1 COG:Cgl2961 KEGG:ns NR:ns ## COG: Cgl2961 COG0495 # Protein_GI_number: 19554211 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Leucyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 8 989 2 950 952 998 53.0 0 MSDNEKTTQPASTDSTEPAYRYNAALAQDIEGKWQKIWDDKGTFWAANVNGDLKDGKGRN ADGRPAYFAMDMFPYPSGKGLHVGHPLGYLASDVVSRYHRMKGENVLHAMGYDAFGLPAE QYAVQTGQHPRVTTLANIANMSRQLHRMGLSFDDRRSFATIDPGYVRWTQWIFSRIYDSW YDEDAVNPSGSKGSARPVSELVAKFESGEKAIPGHESDGKAWADLDQAEQQDILNDFRLA YISKSPVNWCPGLGTVLANEEVTAEGKSERGNFPVFQRELRQWSMRITKYGHRLIEDLDG IDWPEKVKLMQRNWIGESHGASVHFTVATADGSKDMEIYTTRPDTLFGTTFAVVSPEHHL LENVPAEWPADVPEDWKGGYATPVEAVKAYRLAAEAKTAKDRVDEGGEKTGLFTGLYATN PITGAKLPLFTADYVLMDYGTGAIMAVPGGDQRDYDFAVKFGLPVIYTVKPLPESGDDLA NYEGKAPFVSHDGIVINSSVEATAAKGDALSLNGLRVDDAIAKVNAWLESAGVGKGTVSY RLRDWLFSRQRYWGEPFPIVYGEDGAPHLLPDSALPINLPDVPDYEPRTFDPMDAESNPE APLSRNEDWVKVELDLGDGKKTYYRDTNTMPNWAGSCWYYMRYIDPSDTEHMVEKDEFDY WMGPNHNKYSGDEGGVDLYIGGVEHAVLHLLYSRFWHKVLFDLGYVDSAEPFHKLFNQGM IQAYAYTDDRGQYVPADEVVEGPAGADGEPTFTWNGEHANREFGKMGKSLKNIVTPDYMY ENYGADTFRLYEMSMGPLDESRPWNTRNVVGGMRFLQRLWRNVVDETSGEAHVTEDTPDV KTLKLLNNTIAEVTVEMEGMRPNTAIAKLIVLNNHLTSLPAVPRAAVEPLILMLAPIAPH ICEEMWSKLGHDESLSAEPWPVADEKYVGHDTVTAVVQIKGKVRAKLEVPVDIDPADLEK QALEAVADRLGGKTPHKVIVKAPKIVSIVPAE >gi|197324945|gb|DS990229.1| GENE 1110 1168701 - 1169630 995 309 aa, chain - ## HITS:1 COG:BS_glnH KEGG:ns NR:ns ## COG: BS_glnH COG0834 # Protein_GI_number: 16079797 # Func_class: E Amino acid transport and metabolism; T Signal transduction mechanisms # Function: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain # Organism: Bacillus subtilis # 18 271 5 261 273 124 33.0 2e-28 MTGLQHTKVGRRRIMRRFSAALAAVLWTAGSLTACGSSSSRDDANGVSIRQPEGPTVSIG VASDQPGLGVWHNGGYSGFDVDVARYVAKALGYADKQIVFKPVTPRSRVSMLESAQVDMV VSSFGITERHESAVTMTGPYLIVRQDLLVRAADAGDITGIKDMNGRKACVVAGSDVTDAV RSQAPKASIEERDDYGQCLTSLLIGDVDAVAAGDAILTGLATVKGNGYVQVVGAPFGEER YGIAVKHGNTQLADSIGDILSDMIDDGTWRQAVRGMRRQIGYTVDSKLNPPDPAASSDTA SSDPEQGDE >gi|197324945|gb|DS990229.1| GENE 1111 1169641 - 1170582 1325 313 aa, chain - ## HITS:1 COG:CAC0294 KEGG:ns NR:ns ## COG: CAC0294 COG0598 # Protein_GI_number: 15893586 # Func_class: P Inorganic ion transport and metabolism # Function: Mg2+ and Co2+ transporters # Organism: Clostridium acetobutylicum # 8 312 15 315 315 268 47.0 9e-72 MFSTINGQVEQIEKPENGSWLCLSEPTDVELATVSQQTGVDLADLRAPLDDEERSRIDVE DDYTMIIVDIPTVEERGGRDWYETIPLSIIVTEDLIITVCMQDTPVLHPFMEGTIRGFNT FMRSRFILQILYRNASTYLRYLRIIDRESDKLEFKLRHAMQNREIMMLLELSKTLVYFTT SLKSNEIVMEKLTTLARIQQYPDDEDLLDDVIIENKQAIEMANIYSGVLANMTDAFASIV SNNLNNVMRIFTIISITLSIPTLIFSMYGMNFVPGQLGMPFTGKTWGFTLIIAISVVLSA VVAWFLTRSRMFK >gi|197324945|gb|DS990229.1| GENE 1112 1170736 - 1171572 855 278 aa, chain - ## HITS:1 COG:Cgl2299 KEGG:ns NR:ns ## COG: Cgl2299 COG0406 # Protein_GI_number: 19553549 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Corynebacterium glutamicum # 1 233 1 192 236 81 30.0 1e-15 MIDEVVFLRHGRTAFNVARRLQGQIDVPLDIIGQWQADQSASELARRYYWAKVANIARHP DTLAQPGPGAAKSSDIEEYRQVPASSRRMVVVSSDLFRALQTAHAFADMLGLDVTADARL RERSFGQWEGMTRDEIRAEHADAYDSWRVHTGGELAFGVESRTATGLRGADAVLDLVRGI NAEHADEPTTLMLVGHGSWHVATIETLLGMDPDNLSNLDGMRNAFWSTLRPVYRPSGGVE WMMTAFNQGPAVAALCDWENGPQSLHGPHMPMWKPIEG >gi|197324945|gb|DS990229.1| GENE 1113 1171693 - 1173267 2092 524 aa, chain - ## HITS:1 COG:DR0964 KEGG:ns NR:ns ## COG: DR0964 COG2939 # Protein_GI_number: 15805988 # Func_class: E Amino acid transport and metabolism # Function: Carboxypeptidase C (cathepsin A) # Organism: Deinococcus radiodurans # 36 500 30 494 500 275 39.0 1e-73 MSDANTQNTQNAGNAGPVAAAPAQGKQLPEACEHTTRHSITVNGGELDYAATVGTILIDT PKVPKAASIFFTAFDLVNGEGKTDPARPVTFIFNGGPGSSTTFLLMGSIAPKRINVPDAA PVPAAPYALVDNAHTLLPVSDLVFIDAAGAGFSEILDAAKPELWSVDGDVAGFSAFIRAY LSKHHRWNSPKYVLGESYGTTRGAALAYRLQQDGVALNGLTLISNVLDYTFTSDLIDEFY VGYFPSYASVAKYHGRAASDVELDEHLKAARAFAAGPLRLALAAGDSLDDETRHKVARRY AELTGLDERYVYDSNLRVSDPRFRKALLHDEDKIVGRYDGRVAGYDLDRMNDEETFVVDD AWLDPAYSSLCNAYLRDELGWDRVPERKGFADFDWNATEPGKGWMWWHRMPGESGWVMTQ PNVLPDLAAAIAHQPTMKVLLGNGVYDLCTPFFQTEYDIDHLMLPKPLRRNVAFAYYPAG HMLYSSEASLAKFTADLTRFYASDVSGLSAIDERPAAVVPSISL >gi|197324945|gb|DS990229.1| GENE 1114 1173360 - 1176944 4190 1194 aa, chain - ## HITS:1 COG:Cgl2744 KEGG:ns NR:ns ## COG: Cgl2744 COG4913 # Protein_GI_number: 19553994 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 19 1138 21 1071 1111 148 21.0 6e-35 MSGKDMQMIADRWMMESRRLVNWGSYEGYHEFRPSTDSQLPVTLLAGASESGKSTLVDAQ ISLLYPTGTPFNKASNSGRSERSDYTYLRGMIGVGGSDGVDEPMYLRGRDESGVPRSIWG AIVDTYRNFTTGQILSCGKFLYLMPGDGRGDVRRLYLAWDKPIDPRRMDVFRESPFTPTQ LKSTYPGCVTFPNAEAFHTHIWDVMGLSAEACRLLARIQSADAPSRLDDIFKQGVLGVPE ALDLARATVEDYERYDANFRSMEEKTRRMGKLRAITASYGDYESARDAVHSFDAVNPATK SGSATIRAWAIRRMIGEVNERQPLDRRLRDERRSEARAAGKRIESLRTRIDAVRERMRGL DGGDLTRLDAEMRQAERALADITAGRQRIGRMFEAAGEEFPKDEHAWDERRIEAVTFMRS YEQRKGLLDDMRNQTYAAHASVKQTLQRLNDDYERQKSQRTRISRQMDETRAMLCRATGL GPSELPYVAELMDVREDQEHWRLAMNAAYGSMAQTILVDKRHERGFAAKVSAIDPHAMAR RTWQFVDTERGGAGNGPGGANTGATGGTDGEVWLSSKLRYREDSPFAGWLREQTSSERLD ALCVDGIDDSDHAVRQVQADGQIKSGKRGQHGIKDRQQVIGFVNESYLAQLRTRIQDAQR QCDETAQSYASAKEQADRLQRERELADQLAYTAWEKIDENSAKAAIADIERTIASVRNNP KLAELDTLQESLSKELDRSQRQRIDIERQAELADQAVNAAQAWLDEHAAQPQPQTRPLDG EAADISPKAVTNGRTLLTDEVEEALAESYEQRLSGLGDATTRAHMIIGAGAPQRMAQGDT FADRVIAGIGKDLEARVSMLEGRAASARTAVEARMGAYIEMYAGGDDTIAASVDDYRYYQ DELESLSKLATVEATAVEYHNCLDKLLMSFLTIKRAIDTDAGDIHDQLERINAMLDGQQF GPRHGSLSLHADVRRPERAFWSALTRVIGTLNDRKAAQTDDDLDGARCAFASCAAMIDML RREIGQIRDVNGVKSYGARNLDPRCRSSFYALVRHSDGQVERITSTGGRSGGALQELTSF VYGAALIYLLGGGMDNKLKPSYTTLFLDEALIKADGRYTRRALSVLPRLGFQVIVSAPES KTGEILEVSTKAYVTRKDPDTGYTTLHEARLDGIDETEGADEPEGTVESDDAAE >gi|197324945|gb|DS990229.1| GENE 1115 1176947 - 1177969 1345 340 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1035 NR:ns ## KEGG: BBIF_1035 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 340 1 345 345 472 96.0 1e-131 MSDLTNDTAQPDADMDMIDDDMTGTGSADTDSASTGVDDMGAADVEYDGADAEGAVNPYA LFEGDTGDMTADARMVAIMLKRERYISGRFYDLALDNRAAVIRSLNNDLLDLVVNEHYRV MYATAVSGPDMTLRALKTRASLKREEAALLAFLRIRVLEYENAHVAPDEWLVSFEEIRAA LATGAGYLASRNDEEGVLRQVGAIVSVMCTYGYLRQLDDDETMYRITPLVPVVLDRQLAD SWLAVADRDDDDEPAGDMAPAGSRSAAGDTSNADASGADDDGDSDDAGPDAELFEAPLFD DDADADAAENIKGADDANGANDSDIDDETASDGGTAREGE >gi|197324945|gb|DS990229.1| GENE 1116 1177971 - 1179491 1406 506 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1092 NR:ns ## KEGG: BBPR_1092 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 506 1 506 506 922 99.0 0 MGDIRREMERLRPVYETGVLRLLLRQNSMMYVALLRAAFDPLTGELPRETLEESFSQSLS RLVDSGEYQLREDQTIADASRRILADLTREGDDDYAWLANSHDAASHRFLYRLTARAHRA IEALSRLEDDSRTLSGAQANSIIMEIEHARMQLTADPGERVALLNREIKARKHEIRQIRH GQRQAALTESQVEDVIAVIHNTLRGVPIDLRELVLTERDNGDALRRRMQAGDMSVDDILT SYHDEYRRSFSESDSGRRFEDAFQVIITDEGRQQIDAALRDIAHTPYLAGESGVLLDQVR AELSRIYDGIEAVRRQMRVSDEAISRLVRQQTDTRYRTMLGKLNRLYAHVNADAKAHQGD DARPYRTDTAAGRFPPLPSRPARPMVRTTTPGLSVPQTPGDATAPDLRSMIDNGGPRLRR MAALILESPVYADDGNGAIDIVASFNGLPKAERKESELVGFLGELGCGDGAGVAWHCISA DGSPRDWITGPVLAQEDELHDIVKED >gi|197324945|gb|DS990229.1| GENE 1117 1179630 - 1180481 943 283 aa, chain - ## HITS:1 COG:lin1487 KEGG:ns NR:ns ## COG: lin1487 COG0648 # Protein_GI_number: 16800555 # Func_class: L Replication, recombination and repair # Function: Endonuclease IV # Organism: Listeria innocua # 4 279 2 282 297 204 42.0 1e-52 MKELYIGSHLSTAGGWSALLKRSHEEHGTTFAFFPRSPYGRPSKALNPSGAVAFARQLTA EHYGPLVVHAPYVYNLAGKDPDKREFAIRALAEDIRLLTPIRETGQEIYINIHPGAHVGQ GPDRGCSLISDGLNRVFGLESGIMVLLETMAGKGTECGRNFEELATIIDGVDDKANVGVT VDTCHVLDAGYDLVNDFDGVMRQLDDVIGLERVKAVHVNDSQFGLSSHKDRHANIGDGHL GIPFFTRMVNDPRLSRLPMILETKELTETTHREEIALLRGLVQ >gi|197324945|gb|DS990229.1| GENE 1118 1180553 - 1180921 445 122 aa, chain - ## HITS:1 COG:mll7394 KEGG:ns NR:ns ## COG: mll7394 COG3189 # Protein_GI_number: 13476151 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mesorhizobium loti # 6 115 5 114 120 125 59.0 1e-29 MGRMGIAIKRIYESPEAPDGYRVLVDRLWPRGMTKERAALDLWMKDVAPSPQLRKWFGHD PARFAEFRAQYIAELDANAAAEELLRICAEYPDVTLLYAAKDPQVNHALVLRDYLEDATA AK >gi|197324945|gb|DS990229.1| GENE 1119 1180968 - 1181723 308 251 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229255399|ref|ZP_04379326.1| acetyltransferase, ribosomal protein N-acetylase [Capnocytophaga ochracea DSM 7271] # 47 239 1 171 175 123 37 3e-26 MPKLGDTTVFGGKGPLSASFGILPHDPLIRCYPCPYPTGKRTRGIAMNTIETERLLLRPW KIDDAAEAASLFRYASDPEIGLRCGWPPHTSVEGSMHDIRNILAVENNWAITIKGGAPNS NAPVGSIALKPVSHRTADAVAADPELTKRYGKYLGDSALELGYWIGRPFWGKGYMPEALT AVLGYAFDTLRKDAVWGGHYAENTQSGRVQAKCGLHVVAESKQDYFPLIDRHYDCVYRII TAGEWRDAEHR >gi|197324945|gb|DS990229.1| GENE 1120 1181787 - 1182275 514 162 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1040 NR:ns ## KEGG: BBIF_1040 # Name: not_defined # Def: acetyltransferase (GNAT) family # Organism: B.bifidum # Pathway: not_defined # 1 162 4 165 165 327 100.0 1e-88 MTTRIVPIEPQWFMQKAEVQSRTWRELNQGHIPQDIVDAITPAFALKLTRGHAADPNQVV LIALADDRVVGFIELLRTPRPPINRPEAAELASLYVLESEHRHGVGRALVEAGRQAVGND RLVLWVVGFNTNAQGFYRHIGFHKTGLTQTEDMGPELEMINY >gi|197324945|gb|DS990229.1| GENE 1121 1182265 - 1182603 209 112 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1097 NR:ns ## KEGG: BBPR_1097 # Name: not_defined # Def: putative transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 112 1 117 117 181 94.0 1e-44 MLADAEQWRRLFDTGVTSDSPEAQRLAAQIMDKNIKAQVPQDAEEQAAMPLSDTLGVVRS ALCGDPRFADPCGAALYGSKTCADFANEATRIHVQRLAQQLERQLDQRPASS >gi|197324945|gb|DS990229.1| GENE 1122 1183134 - 1183379 391 81 aa, chain - ## HITS:1 COG:BH3089 KEGG:ns NR:ns ## COG: BH3089 COG1051 # Protein_GI_number: 15615651 # Func_class: F Nucleotide transport and metabolism # Function: ADP-ribose pyrophosphatase # Organism: Bacillus halodurans # 9 76 8 77 207 65 42.0 2e-11 MIAAGRTLLEQARELQALAQTGLAYCKDPFDRERYERIRAIAVDMLAMQADVPAEEMRRL LSAGYPTPKLDTRAAIATPTG >gi|197324945|gb|DS990229.1| GENE 1123 1183479 - 1183700 274 73 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1099 NR:ns ## KEGG: BBPR_1099 # Name: not_defined # Def: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 73 1 73 73 141 100.0 1e-32 MQNQVTIAMCNRVGEEGDVTFAGRSVVVDSYGNVISEADGQERLIIADIDLSQTAVARKR RPFLGLRRPEWYA >gi|197324945|gb|DS990229.1| GENE 1124 1184035 - 1184220 164 61 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224283201|ref|ZP_03646523.1| ## NR: gi|224283201|ref|ZP_03646523.1| hypothetical protein BbifN4_05164 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 61 1 61 61 124 100.0 2e-27 MNSKYEVIRQFVAAHGGRAELIEHETAIEDSYHTLAIDPRLVVECNVIAGCFNGEDFVKP L >gi|197324945|gb|DS990229.1| GENE 1125 1184204 - 1185166 535 320 aa, chain - ## HITS:1 COG:SP0796 KEGG:ns NR:ns ## COG: SP0796 COG4405 # Protein_GI_number: 15900689 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Streptococcus pneumoniae TIGR4 # 181 302 27 143 146 84 38.0 3e-16 MRLTEVWRADPERTFELFSEFPADENGFENQAAGMDRERFAVYVHELEEQSRGIGLQPGW VPSSKYVLINDEGAYVGIFNLRHRLNDNLRVGAGHIGYGIAPQYRGRGYATVGLRLTLDK ARELGIDEAYLSVHKDNRASLAVQQHCGARIDHEDGLEYYTRISTAPEPGNLPKAEFMFP GPERDRLVGLILAGTKTATAALMIEYEEDDEPLPQVGERSALVDSSERPVAILVTTAVDV IPLGKITDRHAIDEGEGDTTAAAWRHTHESFWNAPEYRNEFADPDFPLNDDSLVVFEHFK VVRLLDSMANKTADGYEQQV >gi|197324945|gb|DS990229.1| GENE 1126 1185212 - 1185742 -158 176 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1103 NR:ns ## KEGG: BBPR_1103 # Name: not_defined # Def: putative integral membrane sensor signal transduction histidine kinase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 113 176 1 64 64 110 100.0 2e-23 MRTFSWRLGERISYVRCRAACGGSGPPNCSARVPGGRGVHRFRGRVRVPKGQGHAPNPRL GEGAPQPRAITCTVQAGENHTIITIDNTTRPPENAADAEDLIQPFHRGDDTRMANRPGHG LGLSIAKACTDAMQATLAVSRPSPGTFRTEIKLPNRPTQRHCPQQKEHGHRPHARQ >gi|197324945|gb|DS990229.1| GENE 1127 1185847 - 1186542 599 231 aa, chain + ## HITS:1 COG:BS_yoqW KEGG:ns NR:ns ## COG: BS_yoqW COG2135 # Protein_GI_number: 16079108 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Bacillus subtilis # 1 181 1 181 224 103 36.0 3e-22 MCKRFALDLDWNAIAAQFSVAEEDVRGDVLPRPSYNIAPTQNIAVIAQGKDGHRHLTGAY WSLIPSWSSGKTLLYPTYNARVESAHVKSTFAESTRSRRTIIPASGYYEWRGRRPFYFSP EMESTALAMAGLYSWRRPSAASLWQLTATILTCPAVDGPATVHDRMPLLVPAGMTSEWLD PSIDGARLLAPMRKAGAELSARLHFHEVAPPEGDGPRLIRPINREEPMRLF >gi|197324945|gb|DS990229.1| GENE 1128 1186511 - 1186804 160 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSRGFRAFAFLSARRTGKCAHIATQMALFAFLSAHGRRFGAHLRAQTPVAFVYTRLRRPP RLSLSAEAARAGRALNRIGEEAPICGRTRTAAWAPRG >gi|197324945|gb|DS990229.1| GENE 1129 1186943 - 1187482 532 179 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1046 NR:ns ## KEGG: BBIF_1046 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 179 1 179 232 329 100.0 3e-89 MDVSDVIARREFMPTYIWLDVAFLIGFAALLVWRRKYMTLLVGLVMGGVYFAVGYGAFNL LTHSRSISGGSMFWVLLWMSVSYGFTNFSWLWLRLSRDRHLAEWSMLILVWWFCCPLMSQ TFTARFASGMQPIVIQRTTGAYHGWMAVILSRRRMVGHAVCRRSAWIPADQARDRRRYP >gi|197324945|gb|DS990229.1| GENE 1130 1187557 - 1188024 408 155 aa, chain - ## HITS:1 COG:BMEI0164 KEGG:ns NR:ns ## COG: BMEI0164 COG0346 # Protein_GI_number: 17986448 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Brucella melitensis # 24 144 12 129 134 96 49.0 2e-20 MISDNKRIEYCCHVTYAARTVAGMLDHITLHVRDVGRSIAFYEHALAPLGYIVKAHHEPT LGFGVDDGTPHSDFYVSALDDAALAPPPTHIAFLAPNREAVRGFHAAALAVGGRDNGTPG PRPYHPGYYSAFVLDPDGNNIEAVVDWAGWFENHR >gi|197324945|gb|DS990229.1| GENE 1131 1188440 - 1189402 1076 320 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1048 NR:ns ## KEGG: BBIF_1048 # Name: not_defined # Def: Co/Zn/Cd efflux system component # Organism: B.bifidum # Pathway: not_defined # 1 320 1 320 320 593 100.0 1e-168 MRRTVIIVAVMLCAAIALFASIPRLMRFVWPASGPEPRRASDAYCSATLSSGDNKEMLSV EQALNAEIITRAAVKRGLPDHAATVAIATAMQETRLMNLSYGDRDSVGLFQQRPSQGWGA KEQLMDETYAANRFYDELVKVPNWQSVPVEDAAQSVQRSQYPDRYADWTNLARTWAAGLT GETGAGVACALEPAQPSDADMDGLTSDFRNEFPTVMVSQPSSLEPSSKTQDDGGDKAADN SAANDGSGKTTSKTLTFTMSAGTDTENGKRLCRQATAWLVVHARRYGIDSLRANGMRWNR TDGVWAGTETGDLTITATLA >gi|197324945|gb|DS990229.1| GENE 1132 1189746 - 1190567 372 273 aa, chain - ## HITS:1 COG:RSp0310 KEGG:ns NR:ns ## COG: RSp0310 COG0477 # Protein_GI_number: 17548531 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Ralstonia solanacearum # 11 186 56 231 450 75 31.0 7e-14 MHCIGRQTVEQTLSLFGSSVVQYAIFWYLVLRSNSGMVMTGAMVAAALPQAIVSVFGGVW TDRWKRKLLVMLPDAVIAAVTICLSASMAVGWGDTGLILVVLVIRSAGGGIQTPAVQSFI PQIVPEAWLLRVNAINGTLQTAISIASPAIAAALVNLMPLWMIMLVDVSTAIVGIGFVAL IRLDDARLRRPGESSDDAPARHIDFGFVVLSNSADRLAAPTYALMQKESDVSRRCGYWVC WPRSRHSECLRACSCSARSPMWSMYVCCSWSAV >gi|197324945|gb|DS990229.1| GENE 1133 1190585 - 1191061 172 158 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1111 NR:ns ## KEGG: BBPR_1111 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 158 1 158 158 293 97.0 2e-78 MSFLFRHRDPGSRHVYRYGPLRITCVDRDVPIDVRVNAHLMYKVVLSWEDKARCATPFDM IARDLGEFWLLDQWSTVGLHGWIRSPLNYGSSRTILRLFTSAFFHAAHARRPRYVQLLDE HRHAARHRAQPVADRLERWANRRTDRRCAHAGRPWKPP >gi|197324945|gb|DS990229.1| GENE 1134 1191064 - 1191939 1047 291 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1050 NR:ns ## KEGG: BBIF_1050 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 282 7 288 297 507 97.0 1e-142 MEIREHKGSFAVYVVLRVLVIAVAVLKFFNGDYEAVFLCILTLLLLLAPAFVQVRFRIEL PSALEVIVLVFVFAAEILGEISSFYEIFPFWDTVLHTMNGFLAAAIGFSLVDLLNRSDRV KFELSPLYLAIVSFCFSMTIGVVWEFFEFSMDMMFGFDMQKDAVVHSISSVMLDPAHANH AIHINDITQVSVNGRDLGLGGYLDIGLIDTMEDLIVNFIGAVVFSVIGFIYVKNRGKGVS VISRFVPRRKSHDRDYLRLAGGDGDAPLAPGAQAHQAQRQSQHDPHHHDHP >gi|197324945|gb|DS990229.1| GENE 1135 1192109 - 1192729 394 206 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1052 NR:ns ## KEGG: BBIF_1052 # Name: not_defined # Def: hypothetical protein of unknown function (DUF1113) # Organism: B.bifidum # Pathway: not_defined # 63 206 40 183 183 282 97.0 5e-75 MFVYALAGLIGTVHKTIWAYQAKGMFEYRNGSILTPFNYVYGLRVGHRHRAAPYRPGVEG RAGRRSWNSANEPLNIGGRTTVPFMLFWGLLCYLIVRFILPLVLWLVHLIDDTWHTRLAT ILLAWILIDSVVTPPAIFLYGQRANGAVFDNWFAQHIGRLSMTTSCACISRTCACESHRG SSGTIYRPPARSAVMAYGRHARLAPS >gi|197324945|gb|DS990229.1| GENE 1136 1192705 - 1193307 812 200 aa, chain - ## HITS:1 COG:BH3885 KEGG:ns NR:ns ## COG: BH3885 COG2249 # Protein_GI_number: 15616447 # Func_class: R General function prediction only # Function: Putative NADPH-quinone reductase (modulator of drug activity B) # Organism: Bacillus halodurans # 5 168 13 174 202 97 34.0 2e-20 MSNNILVITSNPEKDSMTDAVGAAFAAGAVERGASADVLDLYDEGFNPVYSAADRAHYLG HAPMPEDVVPIQRRLAQADVIALVFPIYWYTMPAMVKGLFDRVICRGFAYHPDGTPGALA DKTVRVIMLTGGSRQWYESDGIGESLDNQICRQTFAKYCGVKDVELVYVDNLSMGDDSSD KRKAAAAQLEGIRQLGASLA >gi|197324945|gb|DS990229.1| GENE 1137 1193354 - 1194373 1066 339 aa, chain - ## HITS:1 COG:L188881 KEGG:ns NR:ns ## COG: L188881 COG4767 # Protein_GI_number: 15673730 # Func_class: V Defense mechanisms # Function: Glycopeptide antibiotics resistance protein # Organism: Lactococcus lactis # 13 218 10 229 354 97 29.0 2e-20 MGFFESFSAPFMMSVALWPLVSFIVTVPVLAMLYHRDNRLGFGAALSAYATVLYLIGLLC FTLYPMPDDPAAYCATHHLHPQLNPLQFIGDIRADGLTAILQIVMNVVFFVPLGFIMKRV FRWKFAVALPVGFLASLLVETMQLTGVMGVFPCSYRLFDVDDLIWNTSGAVIGYGCAMLF DRLFPPRRTDMQTVTRPGFVRRFVAFLIDMGLVVVCATSVGVAAMVLVTMISGRPGADVQ RMRLLGPLGFGDIAMLVMLVLFEWVIPWFRQGRTLGGSYTHMTCETTPRSGARRVAFYAA RFAAICCVVFCGRVPWAGAVILVMGVFWLVRRQMPYDLI >gi|197324945|gb|DS990229.1| GENE 1138 1194663 - 1195484 1059 273 aa, chain + ## HITS:1 COG:alr5188 KEGG:ns NR:ns ## COG: alr5188 COG0745 # Protein_GI_number: 17232680 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Nostoc sp. PCC 7120 # 149 273 96 221 222 62 36.0 1e-09 MDILFVTSDPALASAVKGTLESARHTVSAASDVDSLAGAWPHGTPMDLVIIDDLSAHDLL DETRRSLSRLMDGKAGDGTGTAVRPRTLLLSTPPRTPKANPDDTPQVRRQTPLPTIRKTG RAKADGQAARPAAPPSSLDGASSVPPIHADETIVKPFSDAELLSYVHALESGGAADETTL IHGDLMLDTRNRQAFYRSGKQPLALSAREYTTLETLIRANGEFLSFDELLEKVCGTGIFE QRDIMDGTLYSLTRKMRRMGFFITQRGHRYRIR >gi|197324945|gb|DS990229.1| GENE 1139 1195664 - 1196068 756 134 aa, chain - ## HITS:1 COG:SPy0844 KEGG:ns NR:ns ## COG: SPy0844 COG3576 # Protein_GI_number: 15674878 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase # Organism: Streptococcus pyogenes M1 GAS # 4 134 2 131 133 85 36.0 3e-17 MATLTADMKTFIENNLAWITTVDKDGNLDLGPKMSMFVLDDNHLAYHERTAGQHYRNLQD GSPLVVAVANLAEKKGYRFRGTVTLHTDDDIYDAQVKVAEEKGTKKPAAIPVLEITEIQD LSSGATAGKTIDKD >gi|197324945|gb|DS990229.1| GENE 1140 1196196 - 1197056 791 286 aa, chain - ## HITS:1 COG:ZyijF KEGG:ns NR:ns ## COG: ZyijF COG3738 # Protein_GI_number: 15804541 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Escherichia coli O157:H7 EDL933 # 113 271 39 202 205 89 38.0 7e-18 MIRRYRVSNGNAAGGSGRDDGRKASRAVGRAVAAAMVALLIVSAVLAGSWLWSRRDGIIS GVKAFGVKASSMYSHTREPDTTVMPPDVSRRRYPVLTSPVDFNGNGVDDYTDIMRGARKD ALAHPAYDDGYYQGGYPPADRGACVDVVWRAFRNAGYDLKAMVDADIAADRASYASVAAK PDPNIDFRRTGVLDVFFGKYGITLTNDVNDHAQWQQGDIVVFDRVKHIGVISDKRDADGF SYVLHNMNQRQRENDYLAFSRRMGVTGHYRWDASRVPKSVLRAWKG >gi|197324945|gb|DS990229.1| GENE 1141 1197053 - 1197487 117 144 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGRASPERIRVVLHQLDVKPAVGVRRVHGLIQRAKRIVIDGPVAEIADRVAPLHCLDDVH TYSPYTGLRCRSTPSIMKTMTGRDEDGGFTQHIPSNILATARACVHRVVRRLPGFPGRGP RAAIRPRRRARDMRDARLWRAERL >gi|197324945|gb|DS990229.1| GENE 1142 1197308 - 1198003 830 231 aa, chain + ## HITS:1 COG:CAC0748 KEGG:ns NR:ns ## COG: CAC0748 COG0778 # Protein_GI_number: 15894035 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Clostridium acetobutylicum # 1 223 1 224 241 101 30.0 1e-21 MNIVEAMERRHAVRDFSDRPIDDDTLRALNEAVDAANADGGLDVQLVQDDTDAFGGCPTH YGRFKNVRYCIALIGSDDEDPAQLDRKVGYYGERLALTATQLGMGSSWVVLHETHDHDGR WRLGEGERMPAALALGYGNRPGRAHRSKPLEELGAVENGDLSGAPDWFLSGLRAVALAPS ALGKQPVRFTLLEDGKTVLAQPLEGVQADICLGIARYHFEVGSGHTDIVVR >gi|197324945|gb|DS990229.1| GENE 1143 1198140 - 1199372 1146 410 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1120 NR:ns ## KEGG: BBPR_1120 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 334 1 334 415 317 98.0 6e-85 MKNFFKGISLSSIAAGALAAVTSFLLSAKIGIAGSVIGVAIGSIVSAVSSQIYQNVLHES GRKLQDVAGTTGDGDDGATETTADTDTTASTDANAQDHTAIIANPVALPAPASHELGHGP RTVASDAARRLSHGDETQLIGNAPVDANATIASGSSPVPAPPSSARAATPSGMRTSARPA AARFTASRSATFRSEADRAKRNKRTAIIVAVVSALVAVGATAGVILAITQGQGTDTVVRD WVRQSNTPTEPKQQAPQDDTTDGNSDTKDSTTKDGTDSTGKDSTGDSNSSTNSGNGSTDS TQGNGSDSSSSNGSSSSNGSNGSNGSNGSDSTGTGNGNSSGSDSSGSGSGSNGTGNGSGH SGSDGASSNSGSNGSGSDSGSSSSGSSSGSGSGSSSGGGSTGTGKPGNQA >gi|197324945|gb|DS990229.1| GENE 1144 1199640 - 1199879 86 79 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKPVDFDRFFRLRTLSGRQPKENAPLSRFRGVDSTLKEHLSAFQGVARLRYPEYSGRIAI EVMRFLELGYLAGNPLKRR >gi|197324945|gb|DS990229.1| GENE 1145 1199955 - 1201217 1322 420 aa, chain - ## HITS:1 COG:Cgl0864 KEGG:ns NR:ns ## COG: Cgl0864 COG0366 # Protein_GI_number: 19552114 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 6 407 1 377 386 415 51.0 1e-116 MSGYGMSVNDTTIWWQVYPLGFTGAPIRPSNEGERALTPRLDAIIPWLDYLIDMGANGLL LGPVFASETHGYDTVDYYRIDSRLGDDAAFDRLIDACRNRGIRVMLDGVFNHVGRSFPAF RDALAGHGHESMFHITRNAGGGVDYRRFEGHPELPELNHDSEEVVRLVTDVMLHWLRRGA SAWRLDAAYAVSPAFWTRVLPAVRREFPDVWIMGEVIHGDYPAIVRQSGMDSLTQYELWK AIWSSLESANFYELDWSLKRHNEFLESFAPQTFVGNHDVTRIASRVGDAGASLAMTVLFT VGGVPSIYYGDEQAFRGVKEDRMGGDDAVRPAFPASPDDLPGTGEWMYRLIQGLIGIRRR NPWLTHAMTTPVTVDNRRYAYDAVGHGGERLHVELSLDPAPHAVVSGSDGTVLMRVQHGD >gi|197324945|gb|DS990229.1| GENE 1146 1201278 - 1201721 690 147 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1061 NR:ns ## KEGG: BBIF_1061 # Name: not_defined # Def: transmembrane protein # Organism: B.bifidum # Pathway: not_defined # 1 147 1 147 147 259 100.0 2e-68 MAKNIADGDIIWTQRKRNWCRTPFTFTTYTLTADELATQSGLLHQSFDTVKLFRIVDITI SRTLLQRIFGLSTILIDAMDQSTGGKIVLKNIIDGFAVRKELQHAVDAARNVNRVSTREF MGTGDGYYGGPDGPDLDGDGYPDFPAR >gi|197324945|gb|DS990229.1| GENE 1147 1201858 - 1202595 672 245 aa, chain - ## HITS:1 COG:DR1097 KEGG:ns NR:ns ## COG: DR1097 COG0406 # Protein_GI_number: 15806117 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Deinococcus radiodurans # 10 190 11 184 232 84 37.0 3e-16 MPAKLMSDVSSPQAMPEHVRSITLIRHGRTSYNARHCFQGQIDIPLDEIGEWQVRQTAQA LRSLYVESHPERRQLVVASDLSRAMATAHAFADPLGLVVHPDARVRERNFGEWEGKELAE LERECPEDYRAWAEYRGGELRHGAETKAAVGERGRAALEEWSFSAGADTDLYVFSHGSWI AQTVQTVLGLGAIHPDFADVVSMGNAHWVRFVAADMPDGTLRWRLVDYNHGPALADTDQW EHPAL >gi|197324945|gb|DS990229.1| GENE 1148 1202573 - 1203010 495 145 aa, chain - ## HITS:1 COG:MT2493 KEGG:ns NR:ns ## COG: MT2493 COG0799 # Protein_GI_number: 15841939 # Func_class: S Function unknown # Function: Uncharacterized homolog of plant Iojap protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 120 1 118 126 93 48.0 1e-19 MTAVQSSIDAVRVAAVAADRMKAADIEAFDVSNLLAITDIMMVATAMNERQVIGVAEEVE KDVYLKCGHLSPRSREGVDEGQWVLLDYGDFIIHIMHQDAREYYRLERLWRDCPVVELPL EHPETTGDESADNGSDGDDAGEADE >gi|197324945|gb|DS990229.1| GENE 1149 1203015 - 1204349 1755 444 aa, chain - ## HITS:1 COG:MT1046 KEGG:ns NR:ns ## COG: MT1046 COG1207 # Protein_GI_number: 15840446 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) # Organism: Mycobacterium tuberculosis CDC1551 # 1 438 38 478 513 356 45.0 5e-98 MRSSKPKVLHEFAGKTFLQRVMTSVGHLEPETLAVVVHYQADRVSEAARSYDANVDIVNQ DDIPGTGRAVQCAMAQLTQERNLHGSVLIAASDMPLLDSVTLKKLVAFHEQSGDGATVLT TILDNPTGYGRIIRDRDGHVLRIVEQKDANRSELAVQEVNTSVYVFDADLLAEAIANLDN HNAQGEFYLTDALETAKTRGTVGAFAAPDPLSVEGVNDRLQLAALSKAHNRRVCEHWMLN GVTILDPDTTWIEDDVELAQDVTVLPGSFLKGHTVIGQNAVVGPYTTLIDATVDAEAVVE RSRVQGSHIGRAANIGPWTYMRPGNELGEETKAGAFVEMKKAHIGNGTKVPHLSYVGDAE LGEHTNIGGGTITANYDGVHKNHTHIGSNVHVGAGNLFVAPVEVGDGVTTGAGSVIRHAV PDDSMVYSENTQHIVEGWKPAWER >gi|197324945|gb|DS990229.1| GENE 1150 1204607 - 1205629 1388 340 aa, chain - ## HITS:1 COG:Cgl0918 KEGG:ns NR:ns ## COG: Cgl0918 COG0462 # Protein_GI_number: 19552168 # Func_class: F Nucleotide transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoribosylpyrophosphate synthetase # Organism: Corynebacterium glutamicum # 12 327 10 322 325 407 63.0 1e-113 MVSAILEGKPDKNLILVTGRTHPKLASDVAEQLGIDILETTAYDFANGEMYVRYTESVRG ADVFVLQTHADLVNKSIMEQLIMIDALKRASARSITAVCPLLGYSRQDKKHRGREPISCR LIFDLLKTAGADRIMSVDLHAAQSQGFFDGPVDHLIAMPVLVDYIRDRFSNELGNVAVVS PDAGRIRVAEQWAQRLGGGPLAFVHKTRDITRPNKAVANRVVGDVKGKDCVLVDDLIDTA GTIAGACHVLRDAGAKSVTVVATHGVLSGPAVDRLKNCGASEIVLTDTVPIPEEKRWDGL TVLSIAPLLASAIRAVFEDGSVAELFDTYPEHHGQGFLFA >gi|197324945|gb|DS990229.1| GENE 1151 1205764 - 1206426 832 220 aa, chain - ## HITS:1 COG:Cgl2301 KEGG:ns NR:ns ## COG: Cgl2301 COG1057 # Protein_GI_number: 19553551 # Func_class: H Coenzyme transport and metabolism # Function: Nicotinic acid mononucleotide adenylyltransferase # Organism: Corynebacterium glutamicum # 24 216 8 202 218 251 65.0 6e-67 MSDLSSEKPDGAKRFSTRGNWHMRPRVGIMGGTFDPIHNGHLVAASEVAWVYDLDEVIFV PTGRPVFKLDKQVTNAEDRYLMTVIATASNPKFTVSRVDIDRPGVTYTIDTLRDLRSQHP DAELFFITGADAVAEIMEWKDADQMWDLAHFVAVTRPGYSSPQGVRLPDGKVDTLEIPAL AISSTDVRRRATHGEPVWYLVPDGVVQYIGKHGLYRRRSG >gi|197324945|gb|DS990229.1| GENE 1152 1206519 - 1207070 793 183 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1067 NR:ns ## KEGG: BBIF_1067 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 183 1 183 183 303 97.0 2e-81 MSEERPVISTIRDDIDLNDQTLGLKIAAERLSIVRYVFLVQIEDGIASASQRASLEYADA VLIGWPETDSPDVVELDAAKLKTVREQMSMMEQYIRRFSAMERKGDVDGMTDTLIRITER VAEVRRLYQPGFPLPTFAEIRRVVQDEWDEDMGKIDPQEANTTAGQGKRETDEADSQPEV SEA >gi|197324945|gb|DS990229.1| GENE 1153 1207067 - 1208365 1648 432 aa, chain - ## HITS:1 COG:lin1227 KEGG:ns NR:ns ## COG: lin1227 COG0014 # Protein_GI_number: 16800296 # Func_class: E Amino acid transport and metabolism # Function: Gamma-glutamyl phosphate reductase # Organism: Listeria innocua # 17 431 7 414 415 390 50.0 1e-108 MTKDELNGEVFSGVCAKADAAARAQSDLAQADTQVKNALLHAIADALDADASTIAAANGQ DMQAAAARGMDAGKLDRLRFDEPRIVAGAEGVRHVASLPDPVGEIERGYTLENGLRLNQV HVPIGVIGMIYEARPNVTVDVASLCLKSGNAAILRGGHDAERTNAATLAVIHDMLAANGF DPSLIDTVDEYGREGATAMMEARGHIDVLIPRGGAGLIQAVVRNSKVPVIETGAGNVHIY VDHSGDLDKAIPIIINAKTQRVGVCNAAEKLLVHRDVAERFLPAAAKALADKGVELHADE RAFAIIEAAGIPSLAMKHATDQDWDTEYLALTMGVKIVDSLDEAIDSINMHSTGHTESII SEDYSAIETFAKRIDSAVVMVNASTRFTDGGVFGFGAELGISTQKMHARGPMGLKEMTTT KWIGYGTGQVRA >gi|197324945|gb|DS990229.1| GENE 1154 1208419 - 1208592 90 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MVLRVLWNVVTGNPCVAAEWDEVRLKSTVRRGHGGGGYRILAWTPACVAAAGHVPPY >gi|197324945|gb|DS990229.1| GENE 1155 1208561 - 1210048 2254 495 aa, chain + ## HITS:1 COG:L0092 KEGG:ns NR:ns ## COG: L0092 COG0498 # Protein_GI_number: 15674085 # Func_class: E Amino acid transport and metabolism # Function: Threonine synthase # Organism: Lactococcus lactis # 1 490 2 491 496 446 48.0 1e-125 MTTFHSTRSTTDSLTSKQAIRKGIADDGGLFVTDSLGETKVDIASLTGKPYQQIAAEVLG ALLPDFTEAELAQCIADAYGEQWSDRRITPLKPLGDDYILELFNGPTSAFKDVALQILPR FMAHTTPADGDTDEKIMILTATSGDTGKAALAGFADAPGTAITVFYPQGKVSQVQELQMS TQAGANVNVCAVEGNFDDAQSAVKRIFGDKELAAKLAADSHVVLSSANSINVGRLVPQVV YYFSAYAQLLENQVINMGDEVEFVVPTGNFGDILAGYYAKMLGLPVKHLVVASDKNNVLF DFLTTGTYNRQRPFFQTISPSMDILISSNLERMLYYMSEGDTRLISMLMNDLSQWGTYEV PEPLLAKIRQLFGCGWADEDQVREMIADCWKKNRYVIDPHTACAYFVAQQMPRDLLTPRV ILSTASPYKFPRVVNEALGLDADGTDFECMDVLSRETGTTAPAALRGLETADVRFKDVVP IDGMEDYVEKAAQAL >gi|197324945|gb|DS990229.1| GENE 1156 1210082 - 1210792 576 236 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1131 NR:ns ## KEGG: BBPR_1131 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 236 1 236 236 377 99.0 1e-103 MRWSSVVRQCRFDCVRVDLFGLSNMLFMLLFPVLSCVAALVLTVTGAPGQVAVSVYGGVY GMAAVMSWMSALSVNVAEESGGHRAMNGMIPIARTSQVAGRFLFLLVTCAMWTVDVMACS VFFAFGDMMDSGWAGAMIPSAVIFAFSLIVGSILMAFSYRFTFRAMMRIFVVVIVGLYAL VALLSRLPFDWQGLLQGVADFMSVWWRAALIAVVLCVGVYCISAALAIRFYRAKEL >gi|197324945|gb|DS990229.1| GENE 1157 1210794 - 1211534 686 246 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1132 NR:ns ## KEGG: BBPR_1132 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 246 1 246 246 387 99.0 1e-106 MGTLTETVPSRAVQARRGNRGLATALHLDLAYLLGDGAMQSFASVLLAPVFSIMFNGGAF VDGFGFRLGVVMAVFSPAMMVLTVPLIDMQSGYRLRGLAPASRRNQMASRYLMGLALAVY GAVVIALIDGVQPLVRRDWSFTGNLWVAGVGGLAIVLIIAVIMPVSCLWDKIIGLQITVW VFYVVTLIGAFIPSVLPVSMIAKVMGVVDAVVSHRFWLSAMLVAVSAAAYAVSYAIAVRV YKAKEW >gi|197324945|gb|DS990229.1| GENE 1158 1211518 - 1212477 1427 319 aa, chain - ## HITS:1 COG:BH0652 KEGG:ns NR:ns ## COG: BH0652 COG1131 # Protein_GI_number: 15613215 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Bacillus halodurans # 17 291 10 278 288 199 38.0 8e-51 MTTISEPDTMALAVTGVTKHYDSGFALDDVTFDLPKGYIMGLIGPNGAGKSTLIKLILNM IRRDHGSIQVLGLDNIIDEEAVKEQLGVVFDSSYLYEQWKVSKVERIVAPLYPAWNGERY RRYLDDFGLGGAQNGKKKIKDLSRGMQMKLMLAIALSHDAKLLILDEPTSGLDVLARDEL MDMLHAYIEDGEHSVLFSTHITVDLERAADFITYITGGRLYYTGPKDEFEESFRIVKGGP GELAQLPAGVVLGSHTYQTGFDALVRSDSLGTVSAAVADIVVEPASIDDIIRLTNVRDSV ASSPEAASALKEVGHGNVD >gi|197324945|gb|DS990229.1| GENE 1159 1212573 - 1212947 606 124 aa, chain - ## HITS:1 COG:BH0651 KEGG:ns NR:ns ## COG: BH0651 COG1725 # Protein_GI_number: 15613214 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Bacillus halodurans # 1 104 1 104 123 89 50.0 1e-18 MKLIISSVSGEPIYEQIKNQIRSAVMSGELEAGEALPSLRKLAKELRVSVLTVTRAYNEL ADEGVVQNLQGKGTFVMDKGNELMRRQLETQVRENLAEAIRAAKAADIALSELGRMLEDE YRKQ >gi|197324945|gb|DS990229.1| GENE 1160 1213068 - 1213727 856 219 aa, chain - ## HITS:1 COG:CAC3231 KEGG:ns NR:ns ## COG: CAC3231 COG0637 # Protein_GI_number: 15896477 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Clostridium acetobutylicum # 7 214 6 212 215 170 44.0 2e-42 MDDNHGKAAIFDLDGTLLDSMGVWDQVDIDFLAKRGIEVPADYMGKVAAMQFRQIAEYTI ARFGLPDTPEALMQEWDDMARVAYSTVVEAKPHAVEYLSYLKRSGAKLAVATSLPPALRE PAMKHVGIFDYFDQIVSVDDANDVGKDRPDVFLLAAGRLGVVPEQCTVFEDLLVAMRSAK SVGMRVWAIHDDSSDGDWPDICGLADGVLFDFSEAPRSL >gi|197324945|gb|DS990229.1| GENE 1161 1213788 - 1215554 1669 588 aa, chain - ## HITS:1 COG:Cgl1380 KEGG:ns NR:ns ## COG: Cgl1380 COG0497 # Protein_GI_number: 19552630 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA repair # Organism: Corynebacterium glutamicum # 1 582 1 570 593 263 37.0 9e-70 MLEELEIHDLGPIHRALLTPAGGMTAITGETGAGKSMLLSAIRLISGGPASSGRVSPGAS EAWAQGVFAVDDRGGVAQEARDAGAVLEDGELYLSRTVPVSGRSRAVLNGKSAPRSVLES LASQLVTIHGQADQLRIAAASRQREFLDMVAGDDDLLARYRHSWDALRDLDDRLERLRHQ ESSARQRADYLRESIQRINRADPQPGEDEELKGRRARIENAADIAQGVSRALAALDASQV DVDADSSSASDLLNQAISSLRDIHVDGDFGELADRLESLNADLSDIVFSLSRELDGEESV EDLDAINARIHELGELTRRWGPTLQDVIAWRDKATFEVEDLDASPEKVAQLQDEREAAFD RALQDAGALSEARRAAAQSLAATVTDELSSLAMAGARLDIRVTDRGEEAVPVSDSAGEAS TWPLDANGRDDIEFLFTPFPGSPQLPMGKSASGGELSRLMLALELAAADRRSSAAPAGEG GPMTFIFDEVDAGVGGKAAVELGRRLARLARTSQVIVVTHLAQVASWADAQFVVTKGASD GGQSAVTTTVAEVCGDARAHEIARMLSGSESEASLDHARELLASSSLT >gi|197324945|gb|DS990229.1| GENE 1162 1215547 - 1216521 842 324 aa, chain - ## HITS:1 COG:Cgl1379 KEGG:ns NR:ns ## COG: Cgl1379 COG0061 # Protein_GI_number: 19552629 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar kinase # Organism: Corynebacterium glutamicum # 5 289 11 305 320 231 42.0 1e-60 MVCARHAVVVTHSRLRESGTVVSEAVDRLRNVGFEVSIIDNVEAPQFGGVTHKVDEDTEI VVVLGGDGTILRAAELVHCTQVPILGVNMGHVGFLAEFESFQMSEAIRRVADHDYSIDER MIAHVDVWLPGAHEPLQDWALNDITLERADRGKMVELSVRVDDVEMSSFGCDGVIVSTPT GSTAYAFSAGGPIMWPNVKALQLVPLAAHALFARPLIIGAGSTFTLDILDDSSSEGWICC DGRRQCALPKGTRVEVRESKSTLRLARLSGVPFTNRLVTKFDLPVVGWREHARNGGSSAQ RTRARGAADTAAVPSSGEQGVDHA >gi|197324945|gb|DS990229.1| GENE 1163 1216559 - 1216783 118 74 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224283239|ref|ZP_03646561.1| ## NR: gi|224283239|ref|ZP_03646561.1| hypothetical protein BbifN4_05354 [Bifidobacterium bifidum NCIMB 41171] # 1 74 1 74 74 120 100.0 3e-26 MVPAPSYASARVKRGNRLVALAILVFFGADATVVRIAGAGPPGPGSVFMDAPPAALAFRF RRINGSWRLMGYCG >gi|197324945|gb|DS990229.1| GENE 1164 1216782 - 1218245 1926 487 aa, chain + ## HITS:1 COG:BS_yubG KEGG:ns NR:ns ## COG: BS_yubG COG0168 # Protein_GI_number: 16080162 # Func_class: P Inorganic ion transport and metabolism # Function: Trk-type K+ transport systems, membrane components # Organism: Bacillus subtilis # 37 487 2 445 445 199 31.0 1e-50 MSDLVFDESSANREASHGYAWWFSGDTFEKAAAEERTRRKRSFIHHLTSHPGRLTIIYFL LLVALSTSLLLLPVSSHEEEPTSFSTAFFTAVSALSTCGISIVNATTHWTAFGQVVLLVS VQMGGLGVMTFASLIALAANHHMKATQRLLTANELGTTKLNEIRGVLTVVITTTFIIESV TFLALFPGLYGINRGNVRHTAREALFFAVMSYNNAGFTPDGAGLHVNNWAVGMPIMASAF CGTLGFPVLLNLMRCARHRTPPRRWSLHTKITLVTTFSLVLLSLAWFLLVEWDNPFLFKG ADVETRLRYGVVAAVMPRSSGFDLSWVPQVSEPTKVFMSVIMFIGGGSTSTAGGIRVTTF AVILLICRAAFTGHTDINAFRRRIPTRVAMTAVSITAACLFLVLSASLALMLASDCSLTD ALFDACSSFGLGGYSVGVAREDNPAALFILATAMVVGRLGPMTIAYAINRPHALESIRYP NEPIVVG >gi|197324945|gb|DS990229.1| GENE 1165 1218426 - 1219079 972 217 aa, chain + ## HITS:1 COG:lin1022 KEGG:ns NR:ns ## COG: lin1022 COG0569 # Protein_GI_number: 16800091 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transport systems, NAD-binding component # Organism: Listeria innocua # 10 214 7 214 219 126 34.0 4e-29 MARNNRSILVVGLGRFGSSVATTLDSMGQDVLAVDKDPELVNRWSAQVPTVQADMTDVLA VEQLNASDFDTAVVAIGDSVEASVITAGNLLDAGISDIWAKSVSKEHARILQRIGARHII NAETDAGKRVGHLVSGNYLDYIEIEGSHTVVKIHTPSHVVGYSIADAKVNERYGVTVIGI KAPGSEFQYGSKELVMHRNDELVIMGKQDNIDKFIRG >gi|197324945|gb|DS990229.1| GENE 1166 1219227 - 1219901 516 224 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1079 NR:ns ## KEGG: BBIF_1079 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 224 1 224 224 413 99.0 1e-114 MGNITMVDGHVPDGSYQNVTANGSCSCDAGMRFDGLRARGSFDAMGLDGGNVHCEGRLIC RGDMHVNRISGHGELHVGGDLRCSALDFTGKIIVQGDVMCPGGMTVRGLLRNRSCIVTRY LDMQGTLDADELRTERLRMTPLSSAMFGRSGMTEFTRTSNAERIIGGDLRVSRLICTLMQ GVFIRLTDESHVERASCITKLAMDSTSSVLLVSGAAKRVYLRNT >gi|197324945|gb|DS990229.1| GENE 1167 1219937 - 1220695 767 252 aa, chain - ## HITS:1 COG:SMc00973 KEGG:ns NR:ns ## COG: SMc00973 COG1189 # Protein_GI_number: 15964632 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted rRNA methylase # Organism: Sinorhizobium meliloti # 3 243 4 243 245 187 47.0 2e-47 MERLDALIVGLGLVPSRSKAQRLIRDGHVLVDGVAVTKPAANVATASSITVDKGDDYVSR GAYKLIGAFDEFSGRGLPSPRGLRCLDIGASTGGFCDVLLRRGAAQVIALDVGHGQLDSR IARDPRVIEMSGVNIRDVTAANLPYRPDMIVSDVSFISLTYVIPVIARIAAPGASVVLLV KPQFEVGKGNLGKGGIVEDRHLRDQALETVVDCANQHGLTVAGTAPSPIEGTHGNTEFLL FARMDDIAAKAD >gi|197324945|gb|DS990229.1| GENE 1168 1220744 - 1220872 168 42 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPDDITERYPQLADLDGKDDDQRIEVFRDVLGQLQRELDENH >gi|197324945|gb|DS990229.1| GENE 1169 1220953 - 1221987 1038 344 aa, chain - ## HITS:1 COG:Cgl1376 KEGG:ns NR:ns ## COG: Cgl1376 COG0647 # Protein_GI_number: 19552626 # Func_class: G Carbohydrate transport and metabolism # Function: Predicted sugar phosphatases of the HAD superfamily # Organism: Corynebacterium glutamicum # 16 325 7 304 328 188 41.0 2e-47 MNAMLKSTDRPISQTYRLALLDLDGVVYRGKNPVEHAADSIRAAQRAGMQVEYTTNNSSR FQRVVAEQLRGFGLDVEPRQVITSSVVAARMVARHVPAGARILVLGAEHLREEVAGQGLT VVDHAEDAPEAVIQGWYPDMTWQQMAEVSYAVERGALYLVTNRDLTIPRELGIAPGCGSM IQAVINATGVEPIASAGKPESAMYDEARLLAAGNETEPVSRESCLAIGDRLDTDIEAGNR GGYDSLAVLTGVTNPHELMTAPAHLRPSYIVRDLRGLQEAQPSTDASDGNVWTCADATAR LEDGSLTVSDATDINALRAACAAAWTYADNGGDIGSVSLPEFSL >gi|197324945|gb|DS990229.1| GENE 1170 1221993 - 1223804 2329 603 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1144 NR:ns ## KEGG: BBPR_1144 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 603 1 679 679 679 87.0 0 MAEEQGRSGGKSYGNRGYGSGRSGGYRKSGGYRKDGDRGGFRRDGEHGGYRGKGGFHKDG ERRDFHKGGFRKDGDRGGFRRDDRRDGDRPFRRDGERGGFRRDDRRDGDRRDFHRGPRRD GDQGGFRRDGGFHKDGERRDFHKGGFRKDGDRGGFRRDDRRGGDNPRYRRDDRRDFHRDG DRPRYQRDDRRDGERREFSAEEKREYREQKRQDYMNGPRRNSDGTVSYPSQNPYTDRRPN EPKMPKGMEWSMLSKEERERLRGLSKEHAENIGLHILAAYALEEKDPELALAHAKWAAHQ ASRIDFSRETLAFIAYRQGDYKLALREFRTAYRMNGFLDYLPFIADCERGNGDPKKAIEV VRSDDAKALHGEAKAEMFLVYAGALADLKMWDKAIEIVHTLGRSKGLPGEYRMRAVQAEQ YFLDECGRTEEAAALDDLLDRLETQYAEADEDETVDDVIIDHDMEHFTDDELDMLGISED DAQFAPDDYDDMYGGSEDGYGDESDDAESDDSDDSADAEAGQNSDAEDEASLDGPLADEE ELTAKETEEGAESFTDPADQNADDTGEAADEAEDAEPAEADDAQTDEAEALDAAEPAAEA QDE >gi|197324945|gb|DS990229.1| GENE 1171 1223939 - 1225261 641 440 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163739624|ref|ZP_02147033.1| 50S ribosomal protein L32 [Phaeobacter gallaeciensis BS107] # 4 409 1 388 418 251 36 7e-65 MAHVTDFKEAGFDSVLEELEWRGLISQSTDRKQLAEALNGEPVTYYCGFDPTAASLHIGN LVQLINMRHLQAAGHHPIALVGGATGLIGDPRQSGERTLNPKDVVAGWAERLKRQIGGIL ETYGDNPVRFVSNYDWTAQMSVIDFLRDVGKNFRLGTMLAKDTVARRLNSEEGISFTEFS YQVLQGNDFLHLFDEYGCTLEIGGSDQWGNLTSGMDLIRKVRGATVNVFTSPIITDATGK KFGKSEGNAVWLDATMLSPYRFYQFWFNRPDVEMEGLLKAFTFLPKAEIERLAEESRTNP GAREAQRTLAWEVTSFVHGEAATQAAIDASAALFGRGGDLASIDEDTLEAAIDGLKIEDE SGAKTFASVGIDDRITEAGVKAGLFKSISEARKTIKSGGVYLNNNRVTDEEQTLGQDDFL HGRFALIRRGKKALGVVEKH >gi|197324945|gb|DS990229.1| GENE 1172 1225398 - 1226177 929 259 aa, chain - ## HITS:1 COG:lin2818 KEGG:ns NR:ns ## COG: lin2818 COG4905 # Protein_GI_number: 16801879 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 4 241 3 250 270 137 31.0 2e-32 MLFVEKLFLWFLFYSFCGWVYESILVSILERRPVNRGFLNGPLCPIYGAGAVGAVVVLGQ VHNPLVVFLLSMVGASILEYVTSWVMEALFHARWWDYSDYKFNLNGRICLLGAFVFGVGG VLITSVIQPQVAGVTDRLPLPAIHWLCGVLFVLTLIDLVVTVCGIMHFENSLDNLMAAMT HYGDAMKVAVSDVTGKMSESWKSGKEMSFDFMMRVRDAAMSIFNRQQRRMIASFPKLRTE RNNDVLEQLRRILESLYRH >gi|197324945|gb|DS990229.1| GENE 1173 1226177 - 1226764 575 195 aa, chain - ## HITS:1 COG:CAC1667 KEGG:ns NR:ns ## COG: CAC1667 COG1418 # Protein_GI_number: 15894944 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Clostridium acetobutylicum # 33 154 43 159 173 97 46.0 1e-20 MLTRNQIRSLVNEHGHDIIVHDHMQHIERGCYQHGAVTTFAHSIRVACLAVWMADRLHLW DKVDLHSLVRAALLHDYFLYDWHDWDDGAHRLHGFTHGQAALRNAVRDFRLNAIERDSIA CHMFPMTLKPPSYIEGYLVTMADKISATRETFSLERFSKPQLESGKPLAAIESGASAASA HDGRHKPSRSREVLA >gi|197324945|gb|DS990229.1| GENE 1174 1226898 - 1228385 1907 495 aa, chain - ## HITS:1 COG:Cgl1368 KEGG:ns NR:ns ## COG: Cgl1368 COG0165 # Protein_GI_number: 19552618 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate lyase # Organism: Corynebacterium glutamicum # 9 470 10 462 477 485 56.0 1e-137 MAENTEYLALWGGRFTSGPSPELARLSKSTQFDWRLADDDIAGSRAHARALGRAGLLTAD ELSRMEASLDELQRRVDSGAFAPIEDDEDEATALERGLLEIAGDELGGKLRAGRSRNDQI ACLIRMWLRRHSRVIAGQLLSLASALIDQSVKAGGTVMPGRTHMQHAQPVLLAHQLMAHV WPLLRDVQRLVDWDKRIDASPYGSGALAGNTLGLEPVAVARELGFGKVTENSIDGTASRD LVAEFAFVAAMAGVDISRLSEEIIIWNTQEFAFVRLDDAYSTGSSIMPQKKNPDIAELAR GKSGRLIGDLTGLLATLKGLPTAYARDLQEDKEAVFDQVDTLEVLLPAFTGMIATMSFDH DRLAAEAPTGFALATDIAEWLVKNGVPFRHAHELSGACVKLAEGRGQELRDLTDDDFIGI FRDFLPADKAPQVREVLSTEGSVSARNGKGGTSPARVREQIACAKATVDALRVFANSVSD GPAYKSPKSLRSVTD >gi|197324945|gb|DS990229.1| GENE 1175 1228539 - 1231808 3086 1089 aa, chain - ## HITS:1 COG:L0308 KEGG:ns NR:ns ## COG: L0308 COG0610 # Protein_GI_number: 15672632 # Func_class: V Defense mechanisms # Function: Type I site-specific restriction-modification system, R (restriction) subunit and related helicases # Organism: Lactococcus lactis # 5 815 2 753 995 341 31.0 5e-93 MIFDSESVFEENVITVLKQHGWKDGVLRYPTERDLLDNWKDILYRNNNDIDRLGKYPLTD GEMAQIIEQIETLRTPLALNSFVNGRTVSITRDNKEDVAHFGKEVSLYIYDRKEIAGGKS TYQIVQQPVYPAKNTMLSSRRGDLVLLINGMPLIHIELKRSGIPVSQATNQIEKYAHEGV FTGLFRLVQIFVAMTPDDAVYFANPGADKFNPSYYFHWADYNNEPICGGQHPGKDEWKLF IGGTSGTAGLLSIPMAHQLIGFYTIADSADGCLKVLRSYQYIAANAISDVVRKCDWEQRP SMPGRPGGYVWHTTGSGKTMTSFKSAQLIADSHDADKVVFLMDRIELGTQSLKEYRSFAD SETEVQGTENTGVLRDKLNSTDVNDTLIVTSIQKMSNVKAGERGVTQTWLDQLAARRIVF IVDECHRSTFGDMLQVIRRSFPNALFFGFTGTPILGENQKKNSTTAMVFGRCLHRYSIAD GIRDHNVLGFDPYMVTTYKDSEVRRAVALDKAKAESTEDALADPIKAKVFQHYMDKSEVP MGPMVDGAGNRISGIEDFLGRDQYGIDSPHPNMVVSDILEQFPVLSHAGKFHAMLATSSI PEAVNYYHLFKQQAPKLHVTALFDPNIDNNGGATDKEDALTEIITDYNEAFGKEFIIPTW PAMKKDISSRLSHKSPYGGIAANRSQQLDLLIVVDQMLTGFDSKWVNTLYLDKIIDYESI IQAFSRTNRLFGPDKPFGVIRYYRKPHTMYGFIEAAVKLYSGDRPLDLFVQKLPANVKSM DTRYLEILDVFTDNGESDLMQLPESVEARRKFAKEFVELNRYLEAAKVQGFDWNTTEYKV DGTDADDADENDGGNGEPDIVRPQIDERTYLILAQRYKELFDDDSCTGEPDDDGRCDPEA PYELEGYLTEIDTGLIDTDYMNANFVKWLKALKEDSPELAEMSAQLHRSFAALSRDEQRL AELFLHDVERGDVEVEEGMTLRDYITRYAKREKDEQIDKLVDHLGVDRSLLEELTVRYIN EKSLNAFGRFDALRDTIDVPRAKSFFERCMNVTLPNFKVKVQASKLLKQFVLEGGFDIDE EVSHWRFAL >gi|197324945|gb|DS990229.1| GENE 1176 1231805 - 1233352 618 515 aa, chain - ## HITS:1 COG:FN0191 KEGG:ns NR:ns ## COG: FN0191 COG2865 # Protein_GI_number: 19703536 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Fusobacterium nucleatum # 18 509 18 474 477 94 23.0 4e-19 MEPFDIAKLASYRENNRIEAKSAKGGLPRSIWETYSAFANTYGGVILLGVKEREDGTFET VGLTPVEAEHLRQDFWNTVSNRSKVSAVLPIESEVEVLEADGGMVLAIHVPRAPRDERPV YINNDLFGGTYRRRGEGDYRCTRQEISAMLRDQGAETMDSKVLDDLTVADFNTDTVRAYR NRFRAARQGSSWTDLDDERFLRAIGAAAVSREDGRLHPTFGGLLMFGNDYDIVRECPHYF LDYQETLDPTIRWTDRVHSGDGMWSGNLFDFFFRVNRKLAESLKTPFKLDGIFRVDDTPM HKAVREALANCLFNADYHGVRGVVVRRTPDKLVFENPGDIRTGIEQMRLGGVSDPRNGLV MKMFSLIDVGERAGTGVPDVFATWANAGLPEPQIEENFGEADRTILTLMLEADAKPDNNE QISDDYEQINSSNEQITDNNEQLNGLNEQITERQRIVLRFVEKSPRATYDDMARAVGVSS ATVRRDAEILIGRGLLKRVGSRKAGQWEVQRGEES >gi|197324945|gb|DS990229.1| GENE 1177 1233741 - 1234247 183 168 aa, chain - ## HITS:1 COG:MT2825 KEGG:ns NR:ns ## COG: MT2825 COG0732 # Protein_GI_number: 15842293 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Mycobacterium tuberculosis CDC1551 # 16 104 2 91 91 75 43.0 6e-14 MTEQAKVPAIRFAGFTDPWEQRKLGEVAPLQRGFDLPVNQMTPGPYPVVMSNGIGGWHSK YMVKGPGVVTGRSGTIGSLHYIEQNFWPHNTSLWVTSFNGNEPRFIYWLYASIGLERFGS GSGVPTLNRNDVHDLRVGFPCDVAEQRRIGTFFSRLDSLITLHQRKAS >gi|197324945|gb|DS990229.1| GENE 1178 1234247 - 1236814 2140 855 aa, chain - ## HITS:1 COG:lin0522 KEGG:ns NR:ns ## COG: lin0522 COG0286 # Protein_GI_number: 16799597 # Func_class: V Defense mechanisms # Function: Type I restriction-modification system methyltransferase subunit # Organism: Listeria innocua # 9 500 10 505 529 365 40.0 1e-100 MNKQQLAAKIWESANKMRSKIEANEYKDYILGFIFYKFLSETEVTRLHADGMRDEDLEEL REDDTETAQYVRDLCGYFISYDNLFSTWVAKKGDFAIANVRDALSAFDRNIDPARKRVFA GIFDTLQTGLSKLGTDEKSRSKAARDLIYLIKDIPMDSRQDYDTLGFIYEYLISNFASNA GKKAGEFYTPSEVSQLMSEIVAWHLAGREEINIYDPTSGSGSLLIHIGQAVARRNGNPND IRYYAQELKENTYNLTRMNLVMRGILPDNIVARNGDTLKSDWPWFDTDETKDETYEPLFV DAVVSNPPYSQNWEPPEAGEDIRFEYGIAPKSKADYAFLLHDLYHLRDDGIMTIVLPHGV LFRGGEEGTIRRNLVENHHIQAIIGLPANIFFGTGIPTIVMVLRKHRDDDHVLIVDASKY FTKEGKNNKLRASDIKRIVDAVTGNRDVDKFSRLVGIDEIRQNDYNLNIPRYVDSSDNAE SWDVYSTMFGGIPKRDIDALSKYWNVFPGLRRCLFAEENGHSAKLAVQDVREAVNADSDV KAYIQRYREAFIDYPAYIRGELVGNAANVSIAAEEETLANDLLRRLDGIPLVDAYAAYQV LDDSWQKTISIDLETIQAEGHDAVRKVDANMVVKKKGGKDVEVPDGWAGHILPFDLVQGK FLTSDLAEIATFESRLSEIGGEIADILDNLDEDDKSSTDAVSEDGDSFVAAELKKAVKSI GKNPETDFDRALVSAQRLFDEEREVKKNVKNLRSALDEKTRTVIEGLSDEHADDLLAAKW VEPLQRKLEELPQTAVDELIAAVNALNDKYSTTYSDVCEQIEQAEAELGNMLGQLTGNEF DMAGIAELKTLLGGE >gi|197324945|gb|DS990229.1| GENE 1179 1236807 - 1237631 387 274 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1094 NR:ns ## KEGG: BBIF_1094 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 274 1 274 274 550 99.0 1e-155 MTIQIIDNNPDGIRICRVDGESLVTVVVPRDMLGEAKCLPDLPDRGVYYLLDEDHGVLSR VYAGQTTRGLVRLDAHKTKKEFWNKAIMFLDNDVNIDRDVLDSLEAKAIDYVREHGSYET DNGNTPTPRMNPYKEQRVEDLHGSILFRMRVLGYDLDRKETTPVAVNTVFHTKKNGVRAT GRYNRDTGRFTVLSGSEVDLGHAVIKNQGAVAARRQLFAAQTGKVILADDVELSSPSSAA VFVLGGSQNGWIEWVNEQGQTLDYVYRSKEHMNE >gi|197324945|gb|DS990229.1| GENE 1180 1237650 - 1237856 183 68 aa, chain - ## HITS:1 COG:no KEGG:Elen_0798 NR:ns ## KEGG: Elen_0798 # Name: not_defined # Def: hypothetical protein # Organism: E.lenta # Pathway: not_defined # 2 67 4 69 70 93 72.0 3e-18 MTYSDLIEHEAGETEIRSYLVDGDVVPVTMRIPANLRDSAKEAASLRGMSFSAFVRTCMI NELAKGGK >gi|197324945|gb|DS990229.1| GENE 1181 1238278 - 1238592 102 104 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MNELVIDDLFKQSIAVPQEAEQQAIGYFFSHLDTLITLHQRKRESRIIRVRSFIWLAGDI SGIGVSAYQPEKRRPYDRRQHQRRNVVLRLLRAMDQRIQGRCNS >gi|197324945|gb|DS990229.1| GENE 1182 1238504 - 1239433 945 309 aa, chain + ## HITS:1 COG:lin0524 KEGG:ns NR:ns ## COG: lin0524 COG0582 # Protein_GI_number: 16799599 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Listeria innocua # 9 309 8 309 309 382 60.0 1e-106 MTEGNTNAETLFCDYYEQWISVYKEGAIREVTMKKYRLTQAWLGRLIPDLKLADMDRVNY QKLINGYAEHHERQTTMDFHHQLKGAILDAVDEGLIQRDPTRKAIIKGKPPCSKKTKYLN QFELHAVLADLELGKGPSWDWLILLVAKTGLRFSEALGLTPDDFDFVHQTLSVSKTWDYK NGGGFVPTKNASSVRKVQLDWQLIMQLSTLLKDMPAGDPIFVNGKVYNSTANNILARHCE RANVPVISIHGLRHTHASLLLFAGVSIASVSKRLGHASMNTTQDTYLHVIRELENKDVDI VMRALSTLI >gi|197324945|gb|DS990229.1| GENE 1183 1240047 - 1241285 1789 412 aa, chain - ## HITS:1 COG:Cgl1367 KEGG:ns NR:ns ## COG: Cgl1367 COG0137 # Protein_GI_number: 19552617 # Func_class: E Amino acid transport and metabolism # Function: Argininosuccinate synthase # Organism: Corynebacterium glutamicum # 5 402 3 400 401 529 63.0 1e-150 MADNNRIVLAYSGGLDTSVAIPYLKDRTGKDVVAVSLDVGQGGESLETIKNRALACGAVE AYVVDARNEFANEYCMKALKANAMYEGVYPLVSAISRPLISKHLVRAAHQFGADTISHGC TGKGNDQVRFEVSISSIDPTLRAISPIRDLSLTRDVEIAFAKEHKLPITQTEKSPYSIDQ NVWGRAIETGFLEDPWNGPTKDCYSYTDDPAFPPVEDEVVIEFKEGIPVKIDGRDVTPLQ AIEEMNRRAGAQGIGRIDLIEDRLVGIKSRELYEAPGAVALITAHQELENCCLEREQHRI KRDIDKRWGELVYDAQWFSPATQSLNAFIEDTQKYVSGEIRMVLHGGRAVVTGRRSDSSL YDYNLATYDSGDSFDQKSSNGFIDIYGLPSRVAAARDVKFGNGIEVPKNTVE >gi|197324945|gb|DS990229.1| GENE 1184 1241390 - 1241908 595 172 aa, chain - ## HITS:1 COG:Cgl1366 KEGG:ns NR:ns ## COG: Cgl1366 COG1438 # Protein_GI_number: 19552616 # Func_class: K Transcription # Function: Arginine repressor # Organism: Corynebacterium glutamicum # 13 151 2 137 156 105 47.0 4e-23 MSESTPPVQRPATRAARLSAIEQVLLKHIVTSQSQLSDLLSQEGIEVTQATLSRDLDEIN AMKTRLSNGSIAYTIGDRPLRESVGSGIGSKAEQQMSRVLSGLVTSVASAKNLVVIHTPS GAAQYVASVIDKQPIDGVLGTIAGDDTVMVICAEDDIAFERSQWLLTLASKN >gi|197324945|gb|DS990229.1| GENE 1185 1241981 - 1242946 1368 321 aa, chain - ## HITS:1 COG:MT1694 KEGG:ns NR:ns ## COG: MT1694 COG0078 # Protein_GI_number: 15841112 # Func_class: E Amino acid transport and metabolism # Function: Ornithine carbamoyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 5 310 2 304 307 347 56.0 1e-95 MAGQLRHMLRDDDINHAEQKQILELGMKFRENRFYRQPFAGPQAVAVLFDKPSTRTRSSF SIGVAELGGYPLVIDKSGSQLGRGEPVADTARVLTSMAYSIVWRTFGQDRVEEMAKYATC PVVNALTDQFHPCQVLADLLTIAQHRGGVDALPGKTIAYLGDSANNMANSYLLGGATAGM NVRIAGPFGYLPDPAIVADAERIAAENGGSILVTTDPREAVADADCIFTDTWVSMGEEAE YAIRSKPFRDYQVNDELMALAKPDALFQHCLPAYRGKEVTASVIDGPQSVVWDEAENRLH AQKALLTWLIGQQRGDESLLA >gi|197324945|gb|DS990229.1| GENE 1186 1243049 - 1244338 1694 429 aa, chain - ## HITS:1 COG:slr1022 KEGG:ns NR:ns ## COG: slr1022 COG4992 # Protein_GI_number: 16329751 # Func_class: E Amino acid transport and metabolism # Function: Ornithine/acetylornithine aminotransferase # Organism: Synechocystis # 23 426 36 428 429 303 43.0 4e-82 MPTKETLGPTDSQWLGQYSQVHMNVFGTPLRVMDHGEGVRVWDVDGNEYLDFLAGIAVNS LGYAHPAWVKAVSEQAAKCAHVSNYFATEPQIRLASRLIALAGAPEGSHVYFGNSGAEGN EAALKLAKLYGRTLPGASPSIGGKPARILALTHGFHGRTMGALSATWKPVIRKPFEPLVP NIEFVRAGDPIAMYEAFSATGLGQYGKGPVAAVILELIQGEAGVRPLDVAYVKKVRELCD INHALLIIDEVQTGIGRTGSWFAFQREDLTGGITPDIVTFAKGVAGGFPMGGMISFGGKL SALFTPGSHGSTFAGNPLGAAAALATLDTIENEHLVENAEERGEQLRQGIMASGNPLFTS VRGRGLLNAILLSHRCSHAAMNWALEHGLIVNAVAPDALRLAPPLIVSEQEIDEAVSILA KIPADLPND >gi|197324945|gb|DS990229.1| GENE 1187 1244328 - 1245284 1275 318 aa, chain - ## HITS:1 COG:Cgl1363 KEGG:ns NR:ns ## COG: Cgl1363 COG0548 # Protein_GI_number: 19552613 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate kinase # Organism: Corynebacterium glutamicum # 13 307 3 295 317 341 62.0 1e-93 MATELKGPGFHFDVHTDLRADQKAEVLIDALPWLEEFAGQRIVVKYGGNAMVDEHLKRCF AEDMVFLRQVGLHPVVVHGGGPQISHMLKALGIKSEFKGGLRVTTPEAMDVVRMVLTGKV SRELVGLINAHGPFAVGLSGEDGALFSAMQRKPIIDGKPTDIGLVGDVVSVDASAVEDLI SAGRIPVVSSVAPDEDDATEVLNVNADSAAAALAAALGARKLIILTDVDGLYADWPDKNS LIGRIGVENLRDMLPDLESGMRPKMEACVRALDGGVPQAHIIDGRKPHSILNEIFTTAGI GTMVVPDDGIEMRSSYAY >gi|197324945|gb|DS990229.1| GENE 1188 1245344 - 1246513 1449 389 aa, chain - ## HITS:1 COG:ML1407 KEGG:ns NR:ns ## COG: ML1407 COG1364 # Protein_GI_number: 15827737 # Func_class: E Amino acid transport and metabolism # Function: N-acetylglutamate synthase (N-acetylornithine aminotransferase) # Organism: Mycobacterium leprae # 3 389 19 407 407 313 47.0 3e-85 MSVTFAKGFSAAGVAAGISSIEGKKDLALVVNQGPLDSAAGVFTFNRFCAAPVQWSRKTV ADGHIKAVILNSGGANACTGQAGYEQSAATAKKVAELVGTQPDEIAVCSTGLIGELLPLD HVLSGVESAYAALSDDDQAGSDASHAIMTTDTKPKTVSLEGDGYRIGGMVKGSGMIAPQL ATMLCVITTDAAVGAGQLQAALNAAVDHSFNRIDVDGCMSTNDTVLLLASGASGVEPDPD EFNALVAKACASLARQIIGDGEGASHDVRITVTGATTESAALACARAVAASNLLKCAIAG NDPNWGRIVSSLGTVPVEEAPYDSQKVTVDVNGVRICENGGAGRDRSEVDMTPREVHIDI DLNAGDEQATVWTDDLTHEYVHINADYES >gi|197324945|gb|DS990229.1| GENE 1189 1246510 - 1247604 1135 364 aa, chain - ## HITS:1 COG:Cgl1361 KEGG:ns NR:ns ## COG: Cgl1361 COG0002 # Protein_GI_number: 19552611 # Func_class: E Amino acid transport and metabolism # Function: Acetylglutamate semialdehyde dehydrogenase # Organism: Corynebacterium glutamicum # 6 364 15 357 357 268 43.0 9e-72 MARYTVAVAGATGYAGGEALRILAAHPDFEVTCVAGHSSVGQKLGRHMPHIPQLADLTVE DITAEVLNGHDVIILALPHGASGALAAQLDPGVVVVDLGADHRLEERSAWDAFYGGEFFD HWTYGMPELITGKSADGEYTRQRDMLPGAKRIAGPGCNVTATTLAMQPAIAEGLVERRDL VADLVVGYSGAGKNLKRTNLLAAEAFGSAVPYGVGGTHRHIPEILQNFAHAAGLDAARAE EFTLGFTPILAPMARGILATVSAKMTDKALSMSDEEIHDVWAKAYAGQEFIVLLEPGTLP ATANVVGSNAAHVQVVTDRHSGRLIAFAAIDNLNRGTAGQAVQSLNVALGLPEDKGLTKI GVAP >gi|197324945|gb|DS990229.1| GENE 1190 1247707 - 1248327 588 206 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1162 NR:ns ## KEGG: BBPR_1162 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 195 6 200 211 358 100.0 1e-97 MTEPQQQPQSSDDSSGESRHVAAQPQYGQRIEPEYGARADEFPPNYNPYVYGGQPEQPAP QAQPSPSQPASVFGAGPAPAQGGPDQGGPRREPPRYFNGIDLNDPQQNPIYGHWDFYAIF SFIFALVSSFPVLPALIGCLAIWRTRRFHTRGRGLAIAAVVINVLTTIIVIWMTMHGISM DDMYQAMLNMLAPGMGGSGSGDSVSV >gi|197324945|gb|DS990229.1| GENE 1191 1248362 - 1250971 3475 869 aa, chain - ## HITS:1 COG:Cgl1357_2 KEGG:ns NR:ns ## COG: Cgl1357_2 COG0072 # Protein_GI_number: 19552607 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase beta subunit # Organism: Corynebacterium glutamicum # 174 869 1 673 673 421 39.0 1e-117 MPMVDIDWLKEHVEVPSDLTYEQLAKDLVRVGLEEEEIHASQVTGPIVVGYVVDATPEPQ KNGKTINWCHVDVGPAYNAVDENGKKVPRGIICGAPNMAAGEKVVVTLPGAVLPGDFRIE PRKTYGHVSDGMCASERELGLGDSHEGIILLRDYGFTPQEYKALKPGDDAMHLLHLDQPI LEINITPDRGYAFSYRGVAREYHHSTGAKFVDPVTELNKRAPAAPAAESGVSSDIEVIVD DNNPIHGVTGCDRYVARAIHGFDPTNHTPNWMRRRLIRAGMRSISLAVDVTNYVMLDLGQ PMHAYDLDKIEGPIVVRRAAEGEKLTTLDGKEHDLSVEDLLITDSPDGKRGSRILGIAGV MGGLYGEVTADTKNILLEAAHFDSVSIARSARRHKIPSEASRRFERGVDTQLQPAAAQMA AELLTKFGNGEPSGHPTDVNTTMYRRPIPFKATEVARVAGLDVDVNRISDILTDVGCRVA GGGNGEFSVSAPTWRPDLNEPCDLVEEVARLVGYDEIPVTVPPAPVKGTVGLTPDQRRQR WVADTLAEYGMVESLSYPFVGDEDFKAFSYDPAVIKPVSVEIANPLAGDRPYLRRDVLPT LATTVQRNLRRGLEDIRLYEIGHVYLWDPNAPAIPALPGGVRPSDEQLAALDAGLPDQPL HVAGLLTGNAVDSGWLGDRRAVDWSDAVEAVRRVCDRLGARYELRQPAAQDVPAQWHPGR AAQIVAGEQVVGMVGELHPRVNEALGLPAHSAAFELNLTALFGTLDGKPVQAKPIATFPP VKQDLAFTVDQSVTAAQLEAVVREAAGANLESIELFDVFTGEQVGEGKKSLAFAVTFRSP SKTLSAEDSEAIRKSIVDKAEAIGAQLRA >gi|197324945|gb|DS990229.1| GENE 1192 1250979 - 1252046 1653 355 aa, chain - ## HITS:1 COG:Cgl1356 KEGG:ns NR:ns ## COG: Cgl1356 COG0016 # Protein_GI_number: 19552606 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Phenylalanyl-tRNA synthetase alpha subunit # Organism: Corynebacterium glutamicum # 11 351 10 341 345 391 54.0 1e-109 MADNALFDAQSVTDAVAEGISKIQNASSLEELKAIKTQYAGAESAMTKASKAIGSLPVDQ KKEAGKLMGKLRADFGRAFGPKEAELKAQEEQRALEAETVDMTLPVNRRPLGARHPLAKL MEDVEDLFISMGWQISAGPEVETEWYDFDALNFGPDHPARQMQDTFYVKGNQAHDAAGFV GSNMVLRTQTSSDQVRALLTRGVPLYIASPGRVFRTDELDATHTPVFHQCEALAVDKHLT MADLKGVLDKLAVAMFGPEAKTRLRPSYFPFTEPSAELDLWFPDKKGGAGWLEWGGCGMV NPNVLKSAGIDPEEYTGFAFGVGMERTLLLRSDINDMHDLVEGDVRFSEQFVMGE >gi|197324945|gb|DS990229.1| GENE 1193 1252131 - 1252970 923 279 aa, chain - ## HITS:1 COG:Cgl1355 KEGG:ns NR:ns ## COG: Cgl1355 COG0566 # Protein_GI_number: 19552605 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 2 267 14 262 273 123 34.0 5e-28 MKADRVRKVADLANRRTRERFGRFLIEGPQSVREAVTWMPDAVRDLYVQAADGPDGPRIA GETLTSIVERSQEHRIYVHPASEAVMRRISPDCQGIAAVGDADAVRATAQGTQLPEKPFV AAFWQVRDPGNAGTVIRAADAAGCDAVVFVDDCVDMLNPKVIRATAGSLFHIPVMTMGVD EFFGWAGEKVLRTVAADVYGTDGREPRELPEALRDQDLSGVGKAVIFGNEARGLEPGLLG RCDDIVRIPLYGKAESLNLATSAAIMLMSMAMSSHIGTM >gi|197324945|gb|DS990229.1| GENE 1194 1253138 - 1253899 757 253 aa, chain + ## HITS:1 COG:SA2243 KEGG:ns NR:ns ## COG: SA2243 COG4619 # Protein_GI_number: 15928033 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, ATPase component # Organism: Staphylococcus aureus N315 # 19 253 13 211 220 90 27.0 4e-18 MQMLFTARRVSCVVPSAQSDRTIFEDLSFDVDRGQIVDLVGPSGSGKSSLLTAFALLNPH ADGTFTLDGADSSSFSLQQWRRNVAYLPQKPMLMGDSVADTIRLPWTLAVRRADEASVPD DHAATGKKTSARRGRFSRLFRSEQSQAKLALPDQLIRDTLDAMGCEDIDLARAPHDLSGG QAARVSLARTLLTRPAVLLADEVDAGLDDDNADKVASIMASAAARGMAIVRIRHRPPDGR ATRIVTLSSGRLS >gi|197324945|gb|DS990229.1| GENE 1195 1253896 - 1254687 1065 263 aa, chain + ## HITS:1 COG:slr1647 KEGG:ns NR:ns ## COG: slr1647 COG0390 # Protein_GI_number: 16331056 # Func_class: R General function prediction only # Function: ABC-type uncharacterized transport system, permease component # Organism: Synechocystis # 12 256 14 256 259 134 33.0 1e-31 MSGNGYVIDNWGLLVALLMVAVAALVSELMCISIGKTLMWSAIRALVQLCVMGVIIGYVI RSNNPWLVFGVIAVMLVAAVQITLSRAKGIPKGLAGPVLLSLVITMLLMISLVTELVVRP HPWYAPQLVVPLTGMLLGNTVSALAVGLSRFYESMNERRDEVDTLLALGATPWEAARPSI VSSIRLGLLPTTASLASCGIVTIPGMMAGQVIAGGDPLNAAKYQFVVLAAIAALTLVADA LIMTMTYRTCFTDKDQYKPPEDR >gi|197324945|gb|DS990229.1| GENE 1196 1254748 - 1255065 410 105 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1110 NR:ns ## KEGG: BBIF_1110 # Name: not_defined # Def: possible short-chain alcohol dehydrogenase # Organism: B.bifidum # Pathway: not_defined # 9 105 1 97 97 181 93.0 6e-45 MVRYSDHTLYGGSEHDITNSNGRNIAIVTGSALGLGYELTKQLIADGWFVAGIDTAFYRD SRDYVSEEKQHTFMDPGELAQVILFNLVNDANLTVSDILIERNCR >gi|197324945|gb|DS990229.1| GENE 1197 1255115 - 1255291 171 58 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1111 NR:ns ## KEGG: BBIF_1111 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 58 1 58 58 88 96.0 9e-17 MTRMMELINGWLARYYAVVHARMAVRLASVRAAVHGDGEENIASFARWYPASAAQFAG >gi|197324945|gb|DS990229.1| GENE 1198 1255440 - 1255994 107 184 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1170 NR:ns ## KEGG: BBPR_1170 # Name: not_defined # Def: family transcriptional regulator AraC # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 40 184 5 152 152 263 87.0 2e-69 MECNDDTGAMILLRIKRNIVFSYTLHHAESGNGALRCTGGATGPEPGRAGRKTIIVSSDL SERIDYNIPDLPIYARRDALSSFPDYRCPCHWHRDLEVIHVISGQMQYFVNGAIVTLEAG NGLVVNSSRLHCGFSPQQRQCWFTCVVVDPELLERLGADERVFVGELLHQCVSTAARRHS ARLA >gi|197324945|gb|DS990229.1| GENE 1199 1256126 - 1257415 657 429 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|168182407|ref|ZP_02617071.1| 50S ribosomal protein L18 [Clostridium botulinum Bf] # 22 406 5 413 447 257 36 1e-66 MGNLFTWKLHGDGKTLAPGEVVEPDERLTWTRTIGIGAQHVIAMFGATFLVPILTHFDPS TTLFFTAMSTALFLLINKNVLPSYLGSSFGFIAPIAAVASAGKGIPAASFGIMVTGLLLS LVGVAVHFAGAKWIDIIMPPVVNGAIVAIIGFNLAPSVWSNWQKGWDTALVTLLAVLLIA VLFRGLVGRLNILLGVVVGYVYACFRGQVDFSAIGDAAWIGFPKFHLPQVDFSILPMFIP VVLVLVAENVGHVKSVAQMTGRDYDGHMGTALFADGLGTAIAGFGGGSGTTTYGENIGVM AATKVYSTAAYWCAAAFALLLSLCPKFGAVINTIPGGVLGGVTTLLYGMIGMIGVRIWVE NKVNFDKPLNIMVAAIVMIIGIADFTFAFQGVQFNGIAIGTVVILVAYHGLKAIGKVTGT IDKDDPDIL >gi|197324945|gb|DS990229.1| GENE 1200 1257573 - 1258385 1013 270 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1114 NR:ns ## KEGG: BBIF_1114 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 270 1 270 270 525 100.0 1e-148 MGMPLDLYVIRHGESEANVIINAGEQGDNSLYTQDNVTVPDRSWRLTATGRKQADCIGRW LVAQQQLFDRYLVSPYVRTRETAATMALPKAKWEETRVLRERSWGEINTITQDDFRTNYA RNWMFKRTDPLYWRPPAGESIADVSENRVHNLLTSLNRRAEAESVVAVTHGDFMLALMLT LEDLSDEEFMRRADDPAWAITNCTCLHYSRRDPATGRTSSRVRWEQTARPVFDESTGRWE VRVDPWREFQRPLLSNGDLVDVVHSVDPHL >gi|197324945|gb|DS990229.1| GENE 1201 1258526 - 1258696 56 56 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MCVNCCAVGMSAAAKRHDCVYRGGRLEQSGGIAKLCRELESKRYDSRRARQTAGPL >gi|197324945|gb|DS990229.1| GENE 1202 1258646 - 1258942 125 98 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1173 NR:ns ## KEGG: BBPR_1173 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 98 1 98 98 177 100.0 1e-43 MPLRSRAHAHSATIHAHVTGDSTVTRCPSFRGEQDAEADCGTRFLLAYGDQDRTIPVEDQ DTARRVISGTRGARLCTYPGMAHAICDREIDDIRDFLR >gi|197324945|gb|DS990229.1| GENE 1203 1259037 - 1260110 1875 357 aa, chain - ## HITS:1 COG:lin2251 KEGG:ns NR:ns ## COG: lin2251 COG2855 # Protein_GI_number: 16801315 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Listeria innocua # 26 356 17 331 335 163 36.0 5e-40 MDIMREFCTKWWKRIATVDMLFIAVLTLIASLIGSWLKQYPGFKLFGALIIALLIGMIIQ FPIRKWYVGASDKRKAGVKDAAGLISNKLLRLGIILLGFKLNLQVLFTQGIKCLPIAAVV VTLTIVVTYWVARKMGVDPMLAILTAGGTGICGAAAVMGLSGSIKVPPEKEQEKDDDVTM AVAIVAIMGTIFALLEIALGPLTGMTQDQLGITAGASLHEIAHAVAAGDAFNAVNIATIM KLSRVLMLVFAAIIIAIWWEKKHSEVAPTGKRSVAFPWFMLGFIGASVIGTFVPFIATIT PQLVDFAYIVLGMAMAALGINVNFKAIAVKGRKPFLASFLVSILLMLFAAGVAVLFF >gi|197324945|gb|DS990229.1| GENE 1204 1260350 - 1261165 1107 271 aa, chain - ## HITS:1 COG:L0220 KEGG:ns NR:ns ## COG: L0220 COG0583 # Protein_GI_number: 15672356 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Lactococcus lactis # 1 248 1 249 272 157 33.0 2e-38 MFPLLDTLVAVYEIGQFTLAADELKVSQSTVSSRIAQLERMVGAPLFVRNAKSDVTPTEA GRLLYRAATGIDGTWRDACEQIARMRESREPLSVAFSHTTAAVLLPVALPVMAEVLSGFD CSIRVLNSDAILEQAGMKAVQLGVVEKPIVNDSVDRVTLREDRLVLAGDPHGVWMVREHG SGVRYYTDLYFKTVGSMPSRMIEVANNAAIGAALAAGFGCSLVSAAAVPAGVPTRELGDE FVRRFYALVPRSGLTPGQRELAGRVIAALRG >gi|197324945|gb|DS990229.1| GENE 1205 1261250 - 1261888 587 212 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1176 NR:ns ## KEGG: BBPR_1176 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 212 1 212 212 429 99.0 1e-119 MRVFDFDGTIYDGESLFDLYMFSARYEPKVLRHLAPVLRYAVQYKMGRATLAQMERGVGG VTCDYLHDVAASRRILRLDGAAPDAGLAGETAIAEGVSALVNEFWNRHMDRIKPWYEPRP DDVILTASFDVTVGEACRRLGLNRLVSSTVDPRTMRVTCLNFNTNKPKRFREVVGPDTVI DEFYTDSRFDQPMIDMARTAFMVSGNRITQVK >gi|197324945|gb|DS990229.1| GENE 1206 1261930 - 1263474 1625 514 aa, chain - ## HITS:1 COG:SP1771_1 KEGG:ns NR:ns ## COG: SP1771_1 COG0463 # Protein_GI_number: 15901601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Streptococcus pneumoniae TIGR4 # 25 261 7 245 259 133 33.0 7e-31 MSAESETSSNVTAEAMNGDGATPLVSVIVPVYGVERYLDACVEGLVGQTYRNLEILLVDD GSPDRCPAMCDAWTARDERIRVIHKANGGLSDARNVGLAKATGDYIYFVDSDDMVERNLI ERAMATMRDYDADLVMFQFDTISEDGKPLTSSYKHNHYDDVIIMTPIEAIKAQVKAEIDG YFWSFVAAASIYRNHGFSFPVGRKIEDMARICNVIGESHRVVRIPEALYHYRMRRGSITG DWSMQLTRDWVRATDDRETYIVERFPELKNFMKLQQLIFFVNLDYETIRQSLVAKFSIDP QDADRIRRRIEGLTKDVAGAGDEVPESTQSLLDTMKQTFAEMVEPDAGTEAGQAADGREP DREPGRKREKAYSRKRRRYDFYVAGPFFNPEQVASMERLEHVLDTHGKTMFRPRFASDIA EVGPAGCFDDDVNGICASKAVIANLMDEDSGTMFEIGFAHSLGIPVYAYREGLRDGDSIN LMIAQSVRAVFSSSDDLARYLETGEHKDADYAQF >gi|197324945|gb|DS990229.1| GENE 1207 1263805 - 1264032 322 75 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1120 NR:ns ## KEGG: BBIF_1120 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 75 4 78 78 109 97.0 3e-23 MAVSGDSAAIKQMLNNMSSEELLKYYDGDSSISASLFSDRTFPFWAFLVLAAFILLFALL RLHAATLTFSILNLL >gi|197324945|gb|DS990229.1| GENE 1208 1264113 - 1264307 157 64 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPPYATAGGFVGAGLANAALRAWLRFTTETMAPTNMNNVPAMIAYIPYDGTSEKDRSLAR FSPG >gi|197324945|gb|DS990229.1| GENE 1209 1264581 - 1266917 2404 778 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1180 NR:ns ## KEGG: BBPR_1180 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 14 778 1 765 765 1375 99.0 0 MVFIATLRERWEIMEYCPHCGAPYDEGSRFCFQCGAPRQSAAGAPGAPAIPTAPIPVSGY GNMAAQPPVPSPPRASETASDDGFAAFAANAGDAGTPPTVPAGNSATPPANPTGSAAAQP SAKRPRMKLIAAIIAVLVVLAGTGFGLAARKLEWIGPRTVPTIRYRTAAEVSRELETKGF LVKKKQMFNALGKGKCLGLVGVKAGDRLPKGTTVTVIESMGPGVPEGTVGSEPSKAETAL LKMGVKVVEHEVVSEHPGKVAVTMPADGEPVRDTDDGIHIGVGITGDGIPVEIAGMDKDE AKTKLQQQGFDVTLKPRFSSRKNLGKIVRADPGIGVRTSETNVTLYYGVDASKRYDVVGT SIPDRGSDKIMTNTVALAGKYCTDGGSCLTLEPGQTDPNPSGLVLDGKGSSDFFDQLTLC TYSQDISGCNPSSGGYYNAMKDFLIQGDTGAMELYAGFGLPVCGTTSYVGDGPTYCDGTS EKQVEDGSDGTAEQAMSEKYLKYVARDFFVVMPVGANLDQLESNGYFDGPTTYKPYADRP YLIRRDNSAYPEIKATNDTFHRKPNPYAPGTNMQPFKKAPNAYNVYYLVEQPVDFSQFEE ATVSGGRQGDGSDSSPDDGISSDGNGDDTTESDDSSQSQSSQSGARTYTNARFSYRVDVP AGYKWQQESDNGDGRKFDATSGSTQISVWGSNNALSHSPQEELDWLKENLGGNANISLAQ VAGQSVYLSYEQNGTITYIREVVTGGKIAAIEITYPTSERSSGDKLAETVPLTLKFVG >gi|197324945|gb|DS990229.1| GENE 1210 1266929 - 1267576 636 215 aa, chain - ## HITS:1 COG:lin0589 KEGG:ns NR:ns ## COG: lin0589 COG0400 # Protein_GI_number: 16799664 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Listeria innocua # 17 205 19 207 219 73 28.0 2e-13 MRIEHAVASLPANGSGPVFLLLHGWGSNEHDLPGLLDYCAPGADYASLRAPISYGPGYTW FGSWDYEGVPTGESLDRQSRQAGEAIDAWVADSIAPERPIVVMGFSQGGLLAGEMLRVNP KRYAAAVSFSGFLAHGELPGDDELARLKPPMFYGHGSADDIFPKSELDAMNAFYASHTTL TEKIYPGMTHSINMPELRDVAAFLEHNGFVRPRIW >gi|197324945|gb|DS990229.1| GENE 1211 1267956 - 1268381 394 141 aa, chain + ## HITS:1 COG:SP1549 KEGG:ns NR:ns ## COG: SP1549 COG0242 # Protein_GI_number: 15901392 # Func_class: J Translation, ribosomal structure and biogenesis # Function: N-formylmethionyl-tRNA deformylase # Organism: Streptococcus pneumoniae TIGR4 # 1 141 1 136 136 124 46.0 5e-29 MQQPIMTSVAFLSQASAPADPSNDEDRATATDLRDTLAAHRGECVGMAANMIGVAKRIIV FQDKENNRNAIMFNPRIIAGSDPFDTAEGCLSLDGERPTTRYQSITVTYQARSGREYTTA FDGFTAQIIQHEIDHVNGIII >gi|197324945|gb|DS990229.1| GENE 1212 1268453 - 1268878 436 141 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1124 NR:ns ## KEGG: BBIF_1124 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 25 141 2 118 118 194 99.0 1e-48 MTGGLIRLISSNNHHTHRQRRLTSHMQFVHAVLSLHIAQNSQISQTSQTVRSGFDQFVLW YGNLPQLAQTAITVVVGAIVAYLVFKIVAHLVKGLVTAVIAAILAFLISTVPGNLLLSSA FDRIQQEVTTHLPSGIKDQLG >gi|197324945|gb|DS990229.1| GENE 1213 1268933 - 1269142 327 69 aa, chain - ## HITS:1 COG:L121994 KEGG:ns NR:ns ## COG: L121994 COG3478 # Protein_GI_number: 15672697 # Func_class: R General function prediction only # Function: Predicted nucleic-acid-binding protein containing a Zn-ribbon domain # Organism: Lactococcus lactis # 3 68 5 70 72 94 69.0 5e-20 MQQIQYVCVKCGCRSYDSDQFQATGGDFAKLFNVQNKKFVTISCRQCGYTELYRAQTGTG MNVLDFLVG >gi|197324945|gb|DS990229.1| GENE 1214 1269595 - 1269963 464 122 aa, chain - ## HITS:1 COG:Cgl2834 KEGG:ns NR:ns ## COG: Cgl2834 COG3824 # Protein_GI_number: 19554084 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 1 122 2 113 114 85 40.0 3e-17 MRISDEEFEHEVETAIDSLPDRFKRALDNVGIAVADEPNERERATMQRQCDELLGLYEGV PITRRFTGYSGVMPDIITIYKGPHERVCATRDDLRRQIRKTVLHELGHYFGFDDDYLHAH GY >gi|197324945|gb|DS990229.1| GENE 1215 1270168 - 1270713 436 181 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1127 NR:ns ## KEGG: BBIF_1127 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 181 1 195 195 296 92.0 2e-79 MATSEIEQLWISQFQENLGALRKVAGWTTQQLANELGVARQTISNLETGRSPMTKLQYLA LRTVFSAEIAECGNRELAKIIKTLVDDPIELRIKELGTADNTKANSATEPDAPSEADDAR PVAPASKPAAGRRARKNKERPLSTAMQALAVITAALASGTAAGVLTYLLFPNGKPGKNGR R >gi|197324945|gb|DS990229.1| GENE 1216 1270986 - 1272227 1301 413 aa, chain - ## HITS:1 COG:BH1805 KEGG:ns NR:ns ## COG: BH1805 COG4260 # Protein_GI_number: 15614368 # Func_class: S Function unknown # Function: Putative virion core protein (lumpy skin disease virus) # Organism: Bacillus halodurans # 1 320 1 313 433 149 33.0 9e-36 MAIIKAFAGALGGTFADLWKDIITAGRFDEYVVVAPGVPRGTNNGRGSNEYGSEGVISNG SHIYVPENTAAFIFSESGIENVITEPGGYEYRDGEKSVLAGDGIGSLFSSVASRFTFGGQ PVETKYVAFVNLREIRGIKFGTPAPLVYNDKFYGVDLEIRARGTMSLKVTDPVRFVRNYV PANVTSYAFDNPKAREQILSEFVQSFIVAINSLSDQYRISQLPAHANDIATRVRNDETNA GTWRNRFGFEVSGVGIESIEFDEESRQLVRQFASNKMNVSAYEGVSQTAGNMAAQQQIAQ GIQNNGFGDGGGMLLGMNMAQAINPMTAAPAAPMPMAAQPQPQQPQPQAALATESTGGAD TATSGAGAAAPSHAASMSVAEQVETLKKLKELVDIGILSQEEFDMKKHEVLGL >gi|197324945|gb|DS990229.1| GENE 1217 1272323 - 1272556 324 77 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1129 NR:ns ## KEGG: BBIF_1129 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 77 1 77 77 141 100.0 1e-32 MGFLDQIQNKQQAFSKAIPGTEALAGTLKDTFGAFRNGLGIAETRSSGTCEGCGAPLSGH KREAVRCEYCNRETQLN >gi|197324945|gb|DS990229.1| GENE 1218 1273246 - 1273368 95 40 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MENNIPHSNAAGANVLSTIRMLYASAAMASLERLPEAPVN >gi|197324945|gb|DS990229.1| GENE 1219 1273864 - 1273989 84 41 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|224283291|ref|ZP_03646613.1| ## NR: gi|224283291|ref|ZP_03646613.1| hypothetical protein BbifN4_05620 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 41 1 41 41 67 100.0 4e-10 MNERSRFAIEVGLAVMLTCLAVCALAMSLAKKEEKGNHDKR >gi|197324945|gb|DS990229.1| GENE 1220 1274278 - 1274718 621 146 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1131 NR:ns ## KEGG: BBIF_1131 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 146 1 146 146 285 100.0 5e-76 MADTPEEHLTEELLDRLLHSAKIETYLDEEHITDRALPDYLNELLDRSGIKRNPLAEKTG MNQTFIYDIFAGKSRPGRNNAIRLAFGLGCDLRETQRLLRLAGVSELYCKQRRDAIIIWC IQNGRDLPSTDDELYRMGEDTLVPKD >gi|197324945|gb|DS990229.1| GENE 1221 1274901 - 1276571 1267 556 aa, chain + ## HITS:1 COG:lin0627 KEGG:ns NR:ns ## COG: lin0627 COG0515 # Protein_GI_number: 16799702 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Listeria innocua # 41 248 38 235 383 130 35.0 7e-30 MDDKQTAHAMGIDDTYRVERTLARGQGGVTELVSIDGIGPFVRKKIPSQLAQRNVWAALS ACTNPRLPHVEATYELPDHFVVVYDYVSGRPLEHVVQQQEKLPERTAAQLICQLCDAVTE LHRHGIIHRDITPSNVIVADDGAHLVDFGIARTVAANATHDTKALGTYGFASPEQFGFAQ TDARSDVYSLGRLLGYMLTGVYPDDKRYGQLLADPHVVPSQLKSVIDRACSFEPSARIQS ADELRRAILGQPAQQNENIARPAIVNVAPQSARKRSKRKAIIIGAISAILIAALIAGMLV LGNVFKTGKQSTPNSSTTSSSHSNTSDAQQPGKDGTNDSNQFNGSANGQTTDGNSTDNTQ SDTTENPLKITESGWSADSAGYIHYAVAVKNTSSTLQVEFPAISITGRAKDGSILFAEDN LRAVSFPKQTIYLIGQAGNGPGSETPESVEFSINQRGGTDIRQSHGVVTFTTSNLSVSHD SFSNTLFNGEIKAKNTGYDSILNGAYVTVVLRNKKGDIIYGDGQPIDSIFDRKTHSFSIP IDDCPDYASYEIHASI >gi|197324945|gb|DS990229.1| GENE 1222 1276705 - 1277316 713 203 aa, chain - ## HITS:1 COG:MTH1452 KEGG:ns NR:ns ## COG: MTH1452 COG1917 # Protein_GI_number: 15679449 # Func_class: S Function unknown # Function: Uncharacterized conserved protein, contains double-stranded beta-helix domain # Organism: Methanothermobacter thermautotrophicus # 106 198 4 96 99 79 43.0 4e-15 MADENEQQSACEAGRDEQHCKCRQRRAAAEAAAANASAAQQPAAHHCACKHDGAAEAGEG EAHHCKCKHGDAEEAGDEQPKHCACKHDAEGHAISTEPHLGYVADLASLIEIQPESTVSR VVMREDGLRVVLFGFDKDQALSEHTAAMPVTIQVLEGKLRVGGEGREVELVPGGVVYLSA RLPHTVYAVEPSKMLLSMFDNRG >gi|197324945|gb|DS990229.1| GENE 1223 1277125 - 1277571 56 148 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVRFAFAGFRGAVVLARAMVGGRLLSGRSVRCGCLGRGPALTALAVLLVTSRLTCGLLFV LICHDVLLRYVAVSFCCAFAPHIAARTRIHVYQCISMSDAVPGIEPRLIFRQHPPSLSAS TAAGGIIRPAVGRRIVTSRACEPRTQCR >gi|197324945|gb|DS990229.1| GENE 1224 1277531 - 1278397 976 288 aa, chain - ## HITS:1 COG:MT2697 KEGG:ns NR:ns ## COG: MT2697 COG0500 # Protein_GI_number: 15842162 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism; R General function prediction only # Function: SAM-dependent methyltransferases # Organism: Mycobacterium tuberculosis CDC1551 # 15 286 3 269 273 253 51.0 3e-67 MGTQTTNTASQSTTNAQGNGGLPLPQSDRDVEHLQGHWLLARIGKRVLRPGGKKLTGRML AKTELEGKDVVEFAPGLGRTTQLILERKPKSYRGVDRDPQVVDIITKLTAENAPSIPTSC ALHDAADTGLESESADAVIGEAMLTMQTERGKRAIIAEAYRLLRAGGTYSIHELGLQPDD LPEPVKDEVRKALARSIKVNARPLTEKEWRELLESEGFEVLWSGKEPMALLDMRRNLADE GLGGVLRILRNMLGNKDIRARVMNMKSTFHKYSKELNGIAFVVRKPAK >gi|197324945|gb|DS990229.1| GENE 1225 1278687 - 1279052 461 121 aa, chain + ## HITS:1 COG:YPO1439 KEGG:ns NR:ns ## COG: YPO1439 COG3304 # Protein_GI_number: 16121717 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Yersinia pestis # 1 121 1 132 148 85 37.0 2e-17 MRVISNILWIILGGLIIAIGWALIGLVLCVTIIGIPLGLQAFKMAGLTLTPFGKTVRYGG GVGSTLANIIWVVLVGFWMALSYVGAGLLNCITIIGIPFGIQSFKMAKLALWPFGADIVS L >gi|197324945|gb|DS990229.1| GENE 1226 1279087 - 1279719 238 210 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1136 NR:ns ## KEGG: BBIF_1136 # Name: not_defined # Def: GCN5-related N-acetyltransferase # Organism: B.bifidum # Pathway: not_defined # 1 210 33 242 242 396 98.0 1e-109 MRLRTLRRDDYPALIEILRRTWYSEWSGGQKADSDCSRQLAEADFHSCLARSSEATVAVL HGRPVGVILARVDINVPKRLCLLPNRHHRHIIRALFPLLFSTAGRSGIAEMLRINRVDRR LIRGAKNRYDAEVTLFLVDERIRGGGVGGFLFDDLLERFRRVGVRRYYLFTDTGCNVSFY TRRGLTHRREEKVEWDDGGSTVFYLEEGMV >gi|197324945|gb|DS990229.1| GENE 1227 1279881 - 1280174 215 97 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140448|ref|ZP_07802641.1| ## NR: gi|313140448|ref|ZP_07802641.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 97 1 97 97 169 100.0 6e-41 METQHNDSPAETRLDVSQSRQSQSPRMTEQSPVLSKVTRQACDYASVKVIDALIRSSGYG NREIDRLCDGTITYGRIRDIRNGLEAPVRLSEFLQAR >gi|197324945|gb|DS990229.1| GENE 1228 1280395 - 1281717 1336 440 aa, chain + ## HITS:1 COG:SA1431 KEGG:ns NR:ns ## COG: SA1431 COG3177 # Protein_GI_number: 15927183 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Staphylococcus aureus N315 # 3 325 1 324 406 173 33.0 5e-43 MGMKYRSLARSFHTDRSNDAFNNHAKLARQRLEADSTFRTGVVTPLGELFAATPRETSML TEKILLAERRVSRLWNQIPGVMRWDYIRHSISEELFATNEMEGVRSTRKETQEAVEAADK ARKDGDDPKARFSEFAKLYLNLTDKDSALPAGIADIRDIYDKVVLDEINESDKPDGELFR KGDVEIQGPHGLAIHNGVKGEGNIGALLTDMIHLATSDEIPRLQSAIMSHFLFEYVHPFY DGNGRTGRYLLALYLNHDLTMPTVLSLSRTIAENKNAYYKAFMEAEDKLNCGELTLFVNT ILGFIRKAQDELIDELEVRVDQLDKGRAVCDQLERKHGLSAKAVSILYGVIQEEMFDSTK SMTLNDAAYHIRLSKQSARKYVGELMDAGLAIQSGKRPLKIRASESLKGILEAGMGEDAG EHGGKTQQEETETAHEGDPA >gi|197324945|gb|DS990229.1| GENE 1229 1282112 - 1283206 1744 364 aa, chain - ## HITS:1 COG:Cgl1003 KEGG:ns NR:ns ## COG: Cgl1003 COG0012 # Protein_GI_number: 19552253 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Predicted GTPase, probable translation factor # Organism: Corynebacterium glutamicum # 1 362 1 361 361 424 65.0 1e-118 MSLTIGIVGLPNVGKSTMFNALTRNNVLAENYPFATIEPNTGIVPLPDKRLPVLAELVHT EKIVPATVTFVDIAGIVKGASEGEGLGNKFLANIREADAICEVVRAFEDDDIVHVNGKVD PADDIDTINTELILADMQTIENALPKLEKDLRGKKIEQAYMDAVKKAKEILEAGETIDHA AAAGKINKDDIYDLHLMTAKPFIYVFNVDDNELANKELQAKLAASVAPAPAVFLNAQFES DLTDLDEADAREMLEDAGLSESGLDQLARVGFDILGLQTFLTAGVKEVRAWQIHKGWTAP QAAGVIHTDFERGFIKADIVSYDDFVAAEGSMVKIKEEGKLRQEGRDYVMQDGDIVEFKF NVSK >gi|197324945|gb|DS990229.1| GENE 1230 1283443 - 1283634 232 63 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1150 NR:ns ## KEGG: BBIF_1150 # Name: not_defined # Def: aminotransferase, class I and II # Organism: B.bifidum # Pathway: Cysteine and methionine metabolism [PATH:bbi00270]; Metabolic pathways [PATH:bbi01100] # 1 63 338 400 400 123 96.0 3e-27 MWFKAPEGWSGQRFADALLDVAQVAGLPGTCFGRVGKDWVRLSLLKDESLLREAVRRIGA AEL >gi|197324945|gb|DS990229.1| GENE 1231 1283615 - 1284571 1052 318 aa, chain - ## HITS:1 COG:lin0314 KEGG:ns NR:ns ## COG: lin0314 COG0436 # Protein_GI_number: 16799391 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Listeria innocua # 23 311 8 297 393 211 39.0 1e-54 MSAAQDDDTRDGVWEPRFAPVAQIIPPNVFADMDVKVAAAVASGADVIDLAKGNPDAYPA EFIRDVAKSSVDDPLNARYTPFDGKPAFLQAAANWYRNVHGVELDWRSQLFAVEGAVDGL AGLFAILIDRGDAVAFADPYYPSYHCMSVMHGAEEILLPARAELGWLPDLDAVDESVWRR LRMLILNYPNNPTGAQAPASFFEHAVELAKRYGFLIVHDFAYTGLGVSDQQVSLLTVPGA SDVSVEVDSLSKMYAMAGWRAGFVAGNRDVVARLKQYHYQMGSMVTGMIQDAGAVALNSD QSCVDELARRYLRVVQGA >gi|197324945|gb|DS990229.1| GENE 1232 1284753 - 1285433 1001 226 aa, chain - ## HITS:1 COG:BH3480 KEGG:ns NR:ns ## COG: BH3480 COG2011 # Protein_GI_number: 15616042 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, permease component # Organism: Bacillus halodurans # 16 216 7 207 218 159 45.0 5e-39 MNDLLETWLPNVSMIWPEVWDATYETLYMVIVGAVIGYAIGLVLGLLLLLTRRGGLTQNV IVYNILDKIVNIVRSIPFIILMALLVGVTRVIVGTSIGTEAMIVPIAGATVPFYARQVEN ALLEIDPGLVEAAKASGLGTLDIIWRVYLREGRVPIIRVSALSFINVVAFSAMAGVVGGG GLGNLAIIRGYNRFQSDVTLVATLIILVIVFVSQLICNLLAKRLQH >gi|197324945|gb|DS990229.1| GENE 1233 1285426 - 1286568 1286 380 aa, chain - ## HITS:1 COG:SPy0320 KEGG:ns NR:ns ## COG: SPy0320 COG1135 # Protein_GI_number: 15674484 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 26 366 5 350 354 303 45.0 5e-82 MSDATVNATAAAAAEASDSVAAGAPLISLDHVTVEFGRGKNRFRAVDDVSLTINKGSIYG IIGFSGAGKSTLVRTMNVLQRPTSGTVTFSGTTISTLGEGRLLPLRRKIAMIFQHFNLMP SRTVLDNVTLPLIHEKVSRKDARAKAMHLLELVGIADKAKAYPRQLSGGQQQRVAIARAL IGDPEVLLCDEATSALDPRTTRSILALLKDLNARLGLTIVLITHQMQVVKDICTDLAVMS HGKVVDDGSILDVFDHPSNELTREFIYTSGNMNKGITLVQEHPLFRKERESGSVYLLFSV GSGAEETLMADIRERFGVRGNIMFGNVDVIHGTPVGMILVSLDGPAEAVSKALAYFPTVG VSATPLADLHVNEVEENDNE >gi|197324945|gb|DS990229.1| GENE 1234 1286565 - 1287191 688 208 aa, chain - ## HITS:1 COG:CT246 KEGG:ns NR:ns ## COG: CT246 COG0022 # Protein_GI_number: 15604967 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Chlamydia trachomatis # 19 185 157 323 328 135 40.0 7e-32 MVHQHPRHPRGRALDAGHGKQLLKAAIKDPNPVIYFENKGLFPVKGDVPEDLPPIDLSRA QVVREGADVTLVSYGLMLTKALAAADVARREYGVSVEVIDLRSITPLDMPTIYASVKKTG HLVIAHEAIKIGGVGGEIAARVAENHFDYLRGPVLRVGARFTPLPFSPVMEDFVLSGEKE ILDAVLAAAGKSAVDGADGAAGRAGEAA >gi|197324945|gb|DS990229.1| GENE 1235 1287020 - 1287598 355 192 aa, chain - ## HITS:1 COG:BH0777 KEGG:ns NR:ns ## COG: BH0777 COG0022 # Protein_GI_number: 15613340 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit # Organism: Bacillus halodurans # 4 155 2 154 327 163 54.0 2e-40 MSERIITFGEATREAMLEEMRADERVFVYGEDIAKQGGIFGQFAGMKDEFPERVLDTPIS ETALVGAGVGAAIAGAKPVIDLHFADFIGIAMDEVLNQMAKAHYMFGGQATMSLVLRAPD GLMKHGAAQHSQSLETWFTNIPGIRVVVPSTPATASSCSRRPSRILTRSSTSRTRDCSRS RATCPRTCRPST >gi|197324945|gb|DS990229.1| GENE 1236 1287591 - 1288577 1312 328 aa, chain - ## HITS:1 COG:BH0776 KEGG:ns NR:ns ## COG: BH0776 COG1071 # Protein_GI_number: 15613339 # Func_class: C Energy production and conversion # Function: Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit # Organism: Bacillus halodurans # 5 321 10 326 326 328 51.0 7e-90 MSTPLTTQQAVDLYTTMRKIRRFEETVKAHIGKEIVGPAHLYIGEEAVATGVCSNLTHHD YVTSTHRGHGHTLAKGARVDRSLAELYGRATGYCKGKGGSMHLADFSVGMLGANGVVGGG FNIATGAALAIKQRHGSDVAVCFFGDGASSRGTFHEAVNLAASWKLPVIYVCENNAWAST TRFDDIKNVDYLSERAQGYGIPGVTVDGNDVESVRDASAKLIDRARRGDGPSILECKTYR RDGHFITDPQKYRSQEEVEEWKLYNDPIDRFRRKILLEGVVTQDDLDAAEEQLDQEFAQA LEFAVNSPFPKAEDALDDVFSGEVNLYE >gi|197324945|gb|DS990229.1| GENE 1237 1288956 - 1289852 1370 298 aa, chain - ## HITS:1 COG:L118475 KEGG:ns NR:ns ## COG: L118475 COG1464 # Protein_GI_number: 15672301 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface antigen # Organism: Lactococcus lactis # 59 298 39 281 286 197 47.0 2e-50 MCTISNLSIQTHGTNQTRYQGERRDMKIRRIAAAVLAVTSLVGGLTACGNSSSADSGTTV KVGVVGDSNEVWDQVVIPNLKKEGINVELVKFSDYIQPNEALAKGDIDLNAYQGYILMDD FNKTHDNALAAVGETVLNPISLYSDKAKKVEDIPEGSEVTIANDSVNAARGLLLLQSAGL IKLDYKEGTNPTPDDIVSNPKNLKITELEASQTARSLPDVGASVINVFMALDAGLNPKSD AIYIEPVNEQSKPYYNIIVSRAKDKDNATYKKIVDAYRSDDVKKLIDKLYKGAVIPLW >gi|197324945|gb|DS990229.1| GENE 1238 1289776 - 1290036 154 86 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLRSPWYRVWFVPCVWMLRLLIVHIDLVRPLRSGGIPAVFANNVQRNARFHAVLAIASN RAIAEIYMPLSCAYAARPANARPGGA >gi|197324945|gb|DS990229.1| GENE 1239 1290050 - 1290259 83 69 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140457|ref|ZP_07802650.1| ## NR: gi|313140457|ref|ZP_07802650.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 69 1 69 69 118 100.0 1e-25 MPLTGLPDTVDAPDTVVMIMFPPLHGFAVTDVSACIMPPSPGPVHSRRFGYGADFAGESD EMTALCLNM >gi|197324945|gb|DS990229.1| GENE 1240 1290201 - 1291142 880 313 aa, chain + ## HITS:1 COG:STM0847 KEGG:ns NR:ns ## COG: STM0847 COG1446 # Protein_GI_number: 16764209 # Func_class: E Amino acid transport and metabolism # Function: Asparaginase # Organism: Salmonella typhimurium LT2 # 17 296 1 295 313 172 40.0 8e-43 MIITTVSGASTVSGSPVNGILLAIHAGAGDRSKDGRAQKTAQAERDLRRALDAGYALLEQ GAPAEDAVCAAIHVMEDAPEFNAGRGAALTSEGKVSMDACLMTGDGEVGSAAGLTTARHP IDVARAVKERTKHTMFALPGEDLLRSWGIELRDPSYFVTEERRRSLARAQSEGDAWEKHG TIGAVARDAAGHVAAGTSTGGITNQMPGRVGDSPLPGCGTYAADDSVAVSCTGIGEAFVR SVAAHQIADRVRFAGQSVQEAAQAALDDVAARRGDGGVIVMPASGDGVIAYNSETMNYGY VTADGVRVVHGAE >gi|197324945|gb|DS990229.1| GENE 1241 1291297 - 1292100 1051 267 aa, chain - ## HITS:1 COG:TP0797 KEGG:ns NR:ns ## COG: TP0797 COG0345 # Protein_GI_number: 15639784 # Func_class: E Amino acid transport and metabolism # Function: Pyrroline-5-carboxylate reductase # Organism: Treponema pallidum # 5 264 1 258 263 195 42.0 7e-50 MAQNITIGFIGYGNMAQAIAQGLVDAGVVNGGDIVACAAHYDKLEASTAKLGARPLHNAR EVAAAADVVIIAIKPYQIESVIKPIADEFAKNGRFVVSIAAGWDLAKYQKLFGDLAQSIH IQCTIPNTPMAVGKGVLVTETDNTLTDMQTEVFESLFGPISLIERVDAAHMTIAMVVAGC APAFTGMYIEALGDAGVQYGLQRATAYRLAAKMVEGVGALYMATGTHPGAMKDAVCSPGG TTIRGVAKLEKDGFRGAVIDAVDAIVG >gi|197324945|gb|DS990229.1| GENE 1242 1292184 - 1293587 1596 467 aa, chain - ## HITS:1 COG:Cgl0575 KEGG:ns NR:ns ## COG: Cgl0575 COG0596 # Protein_GI_number: 19551825 # Func_class: R General function prediction only # Function: Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) # Organism: Corynebacterium glutamicum # 12 460 22 424 427 173 31.0 8e-43 MTLLAEYYVPGLHIEDRSATVPLDWAGHEPGRGFDGESISLFYRVVTAPEHVHDDLPLLV FLQGGPGGAGPRLLNPSSDGWIAEAVKHFRVVLPDQRGTGRSSRVDSHAMARLAAGGARA QADYLKRFLADSIVRDFEHLRRTEFGGSPWVTLGQSYGGFLTLTYLSLFPEGVAASFTCG GIPHVPANATEVYEHTFPRMARKTAQFYERYGVDADRVAAVADQLPTVAEIAEAGGIGGD SGSLPEGTPLLPNGDPLTVERLQCLGSDFGMKPSFERVHWIFDDAFVDGDGSVSAGAALS DEFLAKVMNATSSRPLYWPLQEFIYANGELDEPIRWAAQRVRDTMPRFSTGERPLAFTGE AMFPWMFEQESALRPFKPAMDLLMEDTRFGVIYDADQLARNEVPLQSAVYFDDMYVDSGM QLDTLSRVGNSHYWVTNEFEHDGLHGDLVFRHLYDEALNRGGLESLF >gi|197324945|gb|DS990229.1| GENE 1243 1293781 - 1296438 2292 885 aa, chain + ## HITS:1 COG:CAC2940 KEGG:ns NR:ns ## COG: CAC2940 COG4585 # Protein_GI_number: 15896193 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Clostridium acetobutylicum # 213 436 181 398 402 90 28.0 1e-17 MGIMERITTWNRKHVLLADALYAVIISIFFTLMAGTNDSNPGIIAYFDHTVMAFWSFVLM VPVAMRRWKPQMATLLFAGLVVVQLAFGPSMVYADLMAPWMLYSAIVYADPRNSKAFIVL AVAIGALASPVIIWSADAGPILNQGVPFDGLSPLETCSGTYIYGLSGDCATTMTTSSVAI FIFIAVYLFAAIIVAYWQRARRITVSMMHERNDALQAKEDEERHIAALAERARIARDMHD VVAHTLSIIIIQSDGGRYAGANNPALARQTMETIRHESERALHDMKRLLGVFGGSDHADY ADVDALIDQARAAAGMGCTIRKTVSGQPRAAALGARASTAMYRMVQEALTNVRKYGGPNV TVQISEIWGADGLHVTVADNGRGASSSLDGHKPGYGLIGMRERIGAVGGSVTSGPQLGGG FVVSGFVPYSTVSTQSEDAAPASESPNVASSAAVSSGAAIMPMAAPTTGTVSMATDTGNA GVVSNVANAPQSAVASQVGVVQPAGVTQPAGAKMPRPVSQMSSVPTQAPPAPITIRLRTI LSALRSKPIQQASATGEQRLNWIERMSQWTERHYLLTDLLLTILVAWVLLSINPSVIYAE GLQLDNRFDRALTIIILIPLIFRRRFPESSALAVAILAALQLLFFEPVSLADILASLVAL YSAVLYGRDKAWRWTGIAAISDSVLFGCKIFAAQTGYRSIFSMLTHSRPAYSLATTPAAF ASAIMFMVISLALCISATAMARWDRSSGSNALVLQAREEALRAEQAKQRILAANMERDRI SESIQSEVTMTLTSVIDQAVAGLRILDDCERHGEQPSPGAISEAFAAIGSQGRAALAHMR KLLGVLRETGFSDEAHRQEQPGMQLRPAASLDKQLHDSQLHGIAS >gi|197324945|gb|DS990229.1| GENE 1244 1296525 - 1297292 757 255 aa, chain + ## HITS:1 COG:BS_yxjL KEGG:ns NR:ns ## COG: BS_yxjL COG2197 # Protein_GI_number: 16080942 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus subtilis # 13 255 5 217 218 173 43.0 2e-43 MLDTVEGMSELQRIRVVIADDQELVRAGFAMVIGSQPDIQVVGQAGDGAQAVSLAESLHP DVVLMDVRMPGMDGLEATSRISALEAAAGDAPRKTRVIILTTFDLDEYVMAAINAGASGF LLKDTEPETLLSSIRTVYQGNAIIAPSATKRLIEKMMEDGYTKHGLTATDGYADGSSTMP GARPVAYTDPELNLLTEREREVLVEIAHGLSNQEIADKLFISLPTAKTHVAHILAKINAR DRVQAVVFAYDNGLV >gi|197324945|gb|DS990229.1| GENE 1245 1297362 - 1300217 4401 951 aa, chain - ## HITS:1 COG:STM3595_1 KEGG:ns NR:ns ## COG: STM3595_1 COG0671 # Protein_GI_number: 16766881 # Func_class: I Lipid transport and metabolism # Function: Membrane-associated phospholipid phosphatase # Organism: Salmonella typhimurium LT2 # 82 347 114 331 355 101 31.0 8e-21 MHKTMRKSAVLKGAVAGIASIAMLMSVSVTANAADTPSYGSAVKPNITSLLGEYYNWWTP KKVVNNTPQGDAFRGKVTDAGKSVLGQNDKTVVAINNKAAADTTKVDGTYTQAERAALDA SDGDALRIYKDAFGPIIGQYVAEGVAQGELPKTSDLVFSKSSKDSFAGFVGTGSAKKDFN YPRPYFNKENEGVDRTIGGDTDLNGLSPTLDIKRIPMINIDGQEYGEDYTDYQEPSQSFP SGHTTKTYNRGLGLATLLPELGPELVARAAEGGNNRVVLGVHYPMDVIGGRISASASVTA LWSDATFRQNVLLPAHDELENYIAARCKADGNGDTVAACASKTGANDKNGYKNTFTDAVS TEPVTDRASAIDAYTARMTYGFSQTSAAGQAPVVPQGAENLLLTAFPDLTDAQRRQVLEA SEIDSGYPLDASSNGFERINLAKAFSAKVTLSEDGSTITAISFGAKAPTVVKTASSKDTI TGLLTDFNEYYVAGKGVTDEGKSVLVHDDQLTEDINNKAYGTDGNTAQDQRALSDAQMNS TNTLYDALGPVLGKYYKDAADAGKLPKTAQFLSDMNKSASTGVAKATYQHPRPYVDRVNF NGTTLNMNGLKQTLNIKKVPGYENFDWGDGEAPDNEYDGLYNSGSFPSGHTTFAFTQGAG LAYLLPELGPEIMTRVSEAGNNRIVLGVHYPLDIMGGHIAGQYGVATAVSGEKTAQEGAA ARAELVDYLTAQCKADNHGDTLDACITNTGANAANGYRNDFTDEVSTKPVTDRASALAAY KARMTYGFQATGTTGQAPVVPDSAVRMLDNVAAFKSLDSAQKKAVLAATEGDSGYPLDAS SQGWARVNLAAAYSAKVTLSADGKNVVKVEPGQAQASVVRETSGSNGNNGGNGNGGSNAG NTGVNNAAGRNPSGTQPLSKTGADVSGIASAFILIAAAGVTIMMIRRKHAI >gi|197324945|gb|DS990229.1| GENE 1246 1300428 - 1300571 95 47 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRSLLLSERRDLIALAAVLTTHRLYELGFSQSLDRLNRQTDSPVDCL >gi|197324945|gb|DS990229.1| GENE 1247 1300611 - 1303319 2833 902 aa, chain - ## HITS:1 COG:Cgl2500 KEGG:ns NR:ns ## COG: Cgl2500 COG0577 # Protein_GI_number: 19553750 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Corynebacterium glutamicum # 21 901 27 853 853 209 24.0 2e-53 MFSITIKLMKKSARMLIPAGIAILIGTAFIAATFLFSNSMDDSLRRQSTAQLGEANYIAT MKTNSNGAVSENGSADRTTVADFNLDRIRATKGVKGARVDTSVSVSISAAGKRSNGYAVG TSTDRKLLPVRIVSGDQPVDNNEVALPKSVAKQLGVGVGDKVDVAPISNGSALSGTAVRD VRVVGLTSDPFGVYSFYGGASVLSENVVAAVYGVDDFDHMQAYMLLLDIDEADAAAAQRT VDEVSGLLPKSYGVESRRSVEAEAVRDLSSNNTSFPTIFLLSFGVLALFVAALVIANTFQ VLVAQRRRTLALLRTIGAKKGQLYTSVLMEAGLLGLIASVLGVGFGVGLIALVTNTGVME MMGMQARLILSWQAFVVPIAFGLIMTVLASLGSARSATSVTPLEALRPIELTDTSRAGKV RATIGVLTIIAGLALAGVAVWQLSGMLNGLDTMASDNYSSVLLMSIGGAALVFLGLVLTA TFWLPVLMRGVGALVSMCGPSAKVAHANIQKNPRRVAATGTALLIGVTLVATIATGAASA KQTMGEALASRYSVDMIATGDGLKTSAVKEAAQVKGVAATMYAPTATVTAEGMNGGTMSL LLVGVKNTSELAGVMHADLSGVTVGDDTVLLPKYRATSGKEITFGSDAKLRFTAAESNGI AASTEQDGSASASSTNGGVSSSMRLKPVQSDYRRVSSNYDAVAFINTSHFNNGDVTATSH MLLMRVDTQSAGVSLSDVFNKIQDVFSYDSTVSITGPVAQRAQWETIINSMLMLLVALIA VAVLIALIGVANTLSLSVIERTRESATLRAIGMTRGQLRRSLAVEALLLSLVAGVVGVVL GTLFGWLGSYMVFSLYGKTVFPFEWGMNGIVLVVAAIAALLASVFPARRAVKTPPVEALA EA >gi|197324945|gb|DS990229.1| GENE 1248 1303346 - 1304398 1071 350 aa, chain - ## HITS:1 COG:Cgl2501 KEGG:ns NR:ns ## COG: Cgl2501 COG1136 # Protein_GI_number: 19553751 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Corynebacterium glutamicum # 45 288 27 273 284 267 55.0 2e-71 MGTMAIHPAARCRSEPATRMVKVTFRENPCIDMEEDVMEQQIMQPQTNAGAAQEQRHPIA IEAIDLVKDYGHGENAVHALRGVNVRFEQGRFTAIMGPSGSGKSTLMHTLAGLDSATSGH IVFDGADITTMNDNQLTMLRRHKIGFIFQSFNLLPMFTAEQNILMPLTLAGQKPDRQWFD MLTTTLGLKERLTHRPNELSGGQQQRVAIARALITKPSLVFADEPTGNLDSVSSAEVLSF LKRSVKELGQTVIMVTHDAVAASYADRAIVFADGQIVADEQRPTAESMNQLLMNERERAT QLVGGPSAGTTVPRPPVAALKGHTEKASFVPGAPSVPGAPQHAAVAQHRR >gi|197324945|gb|DS990229.1| GENE 1249 1304641 - 1304988 182 115 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAQGMPRNAENSDFYRFVARNPLLASLFKTKSQNVVGTELNSRIGPYALPLAGGGAKRRR VVVRRHPTRFTTAQPARAVCNKPALHDVSAGLYGFPFSFRVTVPRPATRKNLAAI >gi|197324945|gb|DS990229.1| GENE 1250 1304998 - 1306314 2084 438 aa, chain - ## HITS:1 COG:L75975 KEGG:ns NR:ns ## COG: L75975 COG2873 # Protein_GI_number: 15672055 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Lactococcus lactis # 5 431 3 426 426 497 59.0 1e-140 MTEANKKYRFETLQLHVGQEQADPATDSRAVPIYATTSYVFHNFDHAEARFGLADPGNIY GRLTNSTQGVFEDRIAALEGGTAGIAVASGAAAVEYAVRNITQSGDHIVSSKNIYGGTFN LLKHTLPRDGITTTFVDPEVPQNFEDAIQENTKLVYFETFGNPNADLPDFEAISAIAHKH HLPVIVDNTFATPYLFRPLEHGADVVVESATKFIGGHGTTLGGVVVEGGNFNWTEVPGKF PTLTEPDPSYHGLNFYEALGGAAFVTRIRAILLRDTGATLSPFAAFLLLQGTETLSLRVE RHVQNALKVVEYLQTVPEVESVSHPSIEGRRDHELYKKYFPNGAGSIFTFDIKGGKDAAR VFIDNLHLFSLLANVADVKSLVIHPASTTHSQETLEELEDQGIHQGTIRLSIGTENIEDI LDDLKGGFEALRASGLAK >gi|197324945|gb|DS990229.1| GENE 1251 1306560 - 1307414 1218 284 aa, chain - ## HITS:1 COG:L191765 KEGG:ns NR:ns ## COG: L191765 COG4905 # Protein_GI_number: 15673533 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 14 149 4 146 235 115 41.0 1e-25 MTPMDVLIVVERFFLYWLAYSFAGWVWETGLSVVLRKRFEDRGMLNGPICPIYGFGGLLV VVLLHDVNNPLSLFLSSGVLACTLEYASSWAIEKLYHMRFWDYSGKPFNINGRVYLNGFL AFGAGATCIKLVVQPWMSDIVRSWPIWLLHAVAGLSFVVVVIDAAITQAGLRSLDSRLAK VSEGIKALKSQQIRQIDTRISEADEQWRETSAKLRGQAEQAYDRFAAGAQQGIRAASRPV ADAGELVRRSLNRQQRRLIRTFPKMVSLRDLTITDMIRDLWNRL >gi|197324945|gb|DS990229.1| GENE 1252 1307669 - 1308544 1197 291 aa, chain + ## HITS:1 COG:CAC1622 KEGG:ns NR:ns ## COG: CAC1622 COG2240 # Protein_GI_number: 15894900 # Func_class: H Coenzyme transport and metabolism # Function: Pyridoxal/pyridoxine/pyridoxamine kinase # Organism: Clostridium acetobutylicum # 15 283 5 275 290 189 36.0 4e-48 MTDDVTLYDRDPHYIPRVAAVHDMCGYGKCSLTAAIPILSAAGCDVCPVPTALFSAHTKY AVFTFHDTTDILSGYLDAWRKENVELDGVYSGFLGSPDQVSIIQRLYREYPSALRLVDPV MGDAGQMYPTYTPELCEAMGALADGADVLMPNLTEASILTKRDYPGQDLDDAAVTELLDA LLGLGAKNVVLKGIDHGDGKIINYVASAEKGAAEKVELVHDKLPYMIHGTGDAFASALCG AVMAGRGLAESARIAGEFVRHAMESTRNQPHFEERGVSFELDLGELTSLVK >gi|197324945|gb|DS990229.1| GENE 1253 1308690 - 1310936 1972 748 aa, chain - ## HITS:1 COG:MT3419 KEGG:ns NR:ns ## COG: MT3419 COG1053 # Protein_GI_number: 15842910 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit # Organism: Mycobacterium tuberculosis CDC1551 # 116 748 24 590 590 451 42.0 1e-126 MSYTALLNDVALLNDAVLPDDAVPLDVAALPGVVVLPGVAVLSGVVVLSDISSMNGIIRR APVTCAANVSPCATILDMSPKHVEEMYDAVIVGAGAAGLSAALGLMHSPDIEQLKESGIE PKVLVISKLQPLRSHTGSAEGGIAASLGNVEQDDWHWHYYDTVKGGDWLVDQDAAKLLAE YAPQTVINLERMGVAFSRTDDGHIAQRRFGGHTADFGKMPVRRAAYAADRIGHQILHSLW QQCVAAGIEFAEEWYVTDVVLDKSGSAVAGVVAYDTHAGVTHAIHAHNVMFATGGAGRLF HTTSNSWDLTGDGMALALSAGLQLEDIEFVQFHPTGLAHTGILLSEAARAEGGVLRNADG EAFMERYAPEHLDLAARDVVSRSIMAEIDGGRGVADPKDPDGPKDCVWLDMTGIDPDHMN AVLPQVVETIKAYANLDPAKDMVPVKPTAHYTMGGIPITTDGEVYRWAESGSQNGDADSG TRTVVEGLFAAGECSCVSVHGANRLGGNSLLDACLFGTRAGESLAARIAQSPVDDPMRGA DADDGPAEAAAALVDDVARSRKQDVATMLAGRPDADDDAADDTSDGMPQAAELGGSDASA QPGSEEDNPYRLAADLGTLMEHALAVRCDARSISEALNLLDTVIRPRASRLTAHSETPAF NQEITAIWEVRHLTLLAEAMLRASEARHESRGSLQRLDYPARDDERFLAHSMIGMADAAD AEASSAPHASILWQSVHIDDFPPKTREY >gi|197324945|gb|DS990229.1| GENE 1254 1310776 - 1311246 322 156 aa, chain + ## HITS:1 COG:lin0580 KEGG:ns NR:ns ## COG: lin0580 COG3695 # Protein_GI_number: 16799655 # Func_class: L Replication, recombination and repair # Function: Predicted methylated DNA-protein cysteine methyltransferase # Organism: Listeria innocua # 47 146 6 98 98 81 44.0 7e-16 MEEISDSTTTPDSTATPGNTTTPGNAATSNGTASSGSTASFNSATSFNSAVYDIVRRIPR GAVATYGQVATLAGRPRNARFVGFALHANPEPGVIPCHRVVFRDGSLAPGFAFGGPERQR AMLEEEGVPFIPPRAGHDNAGDGGWRVDLARCQWQA >gi|197324945|gb|DS990229.1| GENE 1255 1311304 - 1312818 832 504 aa, chain - ## HITS:1 COG:Cgl1982 KEGG:ns NR:ns ## COG: Cgl1982 COG0758 # Protein_GI_number: 19553232 # Func_class: L Replication, recombination and repair; U Intracellular trafficking, secretion, and vesicular transport # Function: Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake # Organism: Corynebacterium glutamicum # 149 347 115 305 394 135 41.0 3e-31 MTVCESDSGLCWDLDEETLARAILTFCLNTADALMTALLKGTADAWEALTLIRDSDPELR TSAGAGKVIEQAFCIGMTRWGSKPTPQAVRSFRSALATWQQRLRTLPTWDRDYLCGWFTM EGRQWIIAPHDVWWPTRLNDLALLGRCAPPLCLWGSGDRAALTSCPQPVGIVGSRGVNEY GRRLTTDIAVHAAQAGHLVVSGGAMGVDAAAHRGALDAMRAYGIGRAGRTVAVFAGGLNH AGPQCNSELFDGIAENGGALVSELCPGTIPEARRFLSRNRIIAALSSTLVVTQARLRSGA LNTVNWGSELQRDIHAVPGNIDMPGNGGCNRLIQEQRATIVCSVADMDDVWHAPHPPESF HDVATQRKDGSDCDVGTPRDAGILRDSSPSGGNRSSAMTESQRAIIDAIRWCRRRRIAPT AQSVAEQLRTRSGEKGLETGATEGRPTEGKSTEGKGADAVPERGMHELVAHVLSQLGTME LIGLITVENGRISIVPETGGRRRS >gi|197324945|gb|DS990229.1| GENE 1256 1312815 - 1314344 1163 509 aa, chain - ## HITS:1 COG:Rv2897c KEGG:ns NR:ns ## COG: Rv2897c COG0606 # Protein_GI_number: 15610034 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATPase with chaperone activity # Organism: Mycobacterium tuberculosis H37Rv # 1 505 1 497 503 391 44.0 1e-108 MAIGGSLSVGLIGLKAFIIQIQAFISPGLPYFSVIGLPDASLSESRERVKSACQASGFKW PDTRVTVNMSPASMPKRGASHDLAIAAGVLSAAGAIPHDSLEETIVLGEVNLDGTVLPIH GLLPIMLHAKERGIRRLIVPYGNEDESRLVPQMDVTCVRHVGELIELAGGRASYTLGVDR ATVSCTVEDTPAFSGLGDMSEVVGQDHVKWALQVAAAGKHHLLMTGPPGSGKTMLASRMP SIMCPLTPEEQLEVASIRSLCGTLQHYGISDMPPFEAPHHTASTASLVGGGSGLAMPGAI TRAHRGILFMDEAPEFSARTLQTLREPMESGYVALSRTKGTTYYPAMFQMVMAANPCPCG YAYGNGERCVCKEKDRIRYFARLSGPILDRIDIQVEVPPVPCIASAPTRDSIGSHVMQQQ VIAARAAAGERYSKYGWGCNAEVPGSWMRANTSVKALELANRALASHRLSLRGVDRAMRL AWTLADLAGKTSPGPDEMSQGIMLRARMS >gi|197324945|gb|DS990229.1| GENE 1257 1314344 - 1314730 512 128 aa, chain - ## HITS:1 COG:MT2966 KEGG:ns NR:ns ## COG: MT2966 COG0792 # Protein_GI_number: 15842441 # Func_class: L Replication, recombination and repair # Function: Predicted endonuclease distantly related to archaeal Holliday junction resolvase # Organism: Mycobacterium tuberculosis CDC1551 # 14 112 24 121 141 75 45.0 3e-14 MLCRLCDGSLKPKQLGVLGEQYAADWLERHGYTILGRNWHSRYGELDIVMMTPDRVIAFV EVKTRRTDHFGTPQEAVTLHKQTNLRRAGVQWLLEPDHRIRHTGVRFDVLTIVARAGMVS VHHIPGAF >gi|197324945|gb|DS990229.1| GENE 1258 1315039 - 1316010 674 323 aa, chain + ## HITS:1 COG:PAE0717 KEGG:ns NR:ns ## COG: PAE0717 COG0479 # Protein_GI_number: 18312125 # Func_class: C Energy production and conversion # Function: Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit # Organism: Pyrobaculum aerophilum # 45 323 5 233 237 147 33.0 4e-35 MSGSSDALATVTLRVNRFTPRPERDRPARSGSPFAKKSSPFGGASASARRRPRGKQWVQE YTLPVRREDTVLDCLLKIKRTVDPTLAFRYSCGHGMCGSDAVAINGTPTLLCTATVGDWA KPATPIPLADGEGFRRTGDAGDKRSADTTAPEENSCEDNAGAQSHELGIIELAPLPGFPV QRDLIADIDPMLDQIRKLKPYLQADGVLATTSEGKVDVFEYLQRPEQLAKYELLSNCIAC GVCEGACPVYAGGDAFIGPAALISASRFVNDSRDTATDERLDAIDTADGVAACQSVRACS RHCPRGIDVGEEMWQIVARVRER >gi|197324945|gb|DS990229.1| GENE 1259 1316056 - 1316727 726 223 aa, chain + ## HITS:1 COG:MT1258 KEGG:ns NR:ns ## COG: MT1258 COG4122 # Protein_GI_number: 15840664 # Func_class: R General function prediction only # Function: Predicted O-methyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 28 222 27 214 215 72 28.0 7e-13 MDKTSYANLARAWEYVENHAYSRQTQALLDAREQAAQCGLAQGSAAQAQLLHTLACMMRS TSVITIGSGSLVEIVQLVDALHGTGQLTAVDSSTQGIALIRKMFFALSDTTQTTLRAVNA PVNVFLPRLNGTDYDLIVVSGDAANYLDTFAQAPRLLREHGVIVFTDMLAFEGDEANGGV PNPADRSDKAVVMRQLLDMVQDDDRFESSLTPTGTGLLIAVKR >gi|197324945|gb|DS990229.1| GENE 1260 1316724 - 1317665 1059 313 aa, chain - ## HITS:1 COG:Cgl1086 KEGG:ns NR:ns ## COG: Cgl1086 COG1611 # Protein_GI_number: 19552336 # Func_class: R General function prediction only # Function: Predicted Rossmann fold nucleotide-binding protein # Organism: Corynebacterium glutamicum # 67 308 4 243 256 250 52.0 2e-66 MSKTDASKKSGKKKKLRKLAAQKLAHAAANNALNDIIAAAGAERGKSSAAGRQTGDAAVR AAVSGVQQDASPLGDTYHRGPVILRGPMIPNDNTTANLLKPNQETDWLHMDPWRVLRIQS EFVDGFGALAELGPAVSVFGSARTPRTDPDYKAARRMGRGIAKHGVAVITGGGPGIMEAA NRGAALAGGKSVGLGIELPHEQGLNQWVNLGMSFRYFFVRKTMFVKYSSGVIVCPGGFGT FDEMFELLTLVQTHKVMSMPIVLYGTEYWRGLFEWLTSTVQDHGMISPLDPSLVLITDDP DEAVEVAVSRIAS >gi|197324945|gb|DS990229.1| GENE 1261 1317717 - 1318985 1582 422 aa, chain - ## HITS:1 COG:HI0225 KEGG:ns NR:ns ## COG: HI0225 COG3004 # Protein_GI_number: 16272188 # Func_class: P Inorganic ion transport and metabolism # Function: Na+/H+ antiporter # Organism: Haemophilus influenzae # 11 411 17 398 400 185 31.0 2e-46 MNSTGRVWARIRRIAASDRISGLIMLAFAFAGLVLANLPWTSHMFEAVAETQLGIPGTNI ILPIGHWAQDGLLTIFFLTVGLDLKQELTTGSLADPKAAAVPMLCAVGGMLMPPVLFITV ISLFSRFAPPAPGIVTIPTGADVPFAEAAQGWAIPTATDIAFSLAVLALFAKALPGSIRA FLMTLATVDDLLAIILIAVFFSSLNAWYWFIGIAICAAIWAFLVRLRRVPWLLVAVIGVL AWVMMFEAGVHPTLAGVLVGLLTPSREMHSEKSPRAQRYASKLQPFSSLLALPIFALFAT GVHFAELSPALMLSPVVIGIIVALVIGKPLGIMITAWLSTHVAGLTMAKGLRVRDMFPAA CACGIGFTVSFLIASLAYTNTELSAEGRFGVLMASLIAALISGILLSRQSKRFEKEELES VS >gi|197324945|gb|DS990229.1| GENE 1262 1319708 - 1320892 1334 394 aa, chain - ## HITS:1 COG:CAC2970 KEGG:ns NR:ns ## COG: CAC2970 COG1168 # Protein_GI_number: 15896223 # Func_class: E Amino acid transport and metabolism # Function: Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities # Organism: Clostridium acetobutylicum # 1 393 1 384 384 348 44.0 1e-95 MYDFQSVVERRGTTSIKWHMIEDDMGVGSEDVIAMSVADMEFKPAPEIVEALVEAAQHDI FGYDYATDGYFRALTAWMSRRHNWDIDPAWVSLSDGVMPAVNTALRAVTHPGDKVILQGP VYYPFTAAAEHNGLTILDNRLVLGDDGRYVMDFDDLEAKASDPRCTALMLCNPHNPVGRV WSADELRRLGDICIAHGVTILADEIHADFAYPGHDVTMFGTLGERYAGHCYEFTAPTKTF NIAGLLCSNVITVNPELKRAFDVAAENIAGLTVSHFGLVACQAAYERAEPWLDALMGVLA DNLSLLREFAERTPGLRLIEPEGTYLAWLDCRGLGFGSADELRDFMRDRARVYFDEGVLF GENGAGFERVNLACPKALLKQVLDNIAVALSQRA >gi|197324945|gb|DS990229.1| GENE 1263 1321320 - 1322633 277 437 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762510|ref|ZP_02169575.1| ribosomal protein S16 [Bacillus selenitireducens MLS10] # 176 403 258 432 466 111 34 1e-22 MGRVVSYNEDVPRCTFCGKTEHQVRKLVAGPSAAICDECIELCVDIVSEERQHSADVNAL TLPKPAEISAYLDRYVIGQSAAKRTLSVAVYNHYKRVNMELRESAGQFDGKKQALGRRRR TDPLADVEVAKSNILLLGPTGVGKTYLAQSLAKVMNVPFVITDATTLTEAGYVGDDVETV LQRLISAADGDVERAQHGIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTIA SVPVEGTRKHRDQDTVTIDTRGILFICGGAFVGLSDIVAGRLGRHESGFGASWHDHEVKP EELLEQVSADDLAEFGLLPEFIGRLPVVSVLDELTEADLARILTEPKNALVKQYRKMFAV DGVDLAFTEQAVNAIASTAITRGTGARGLRSIIEKTLEETMFELPGMDDVQQVIVDAASV RGEGLPKLVRGERRLVA >gi|197324945|gb|DS990229.1| GENE 1264 1322734 - 1323453 1064 239 aa, chain - ## HITS:1 COG:MT2535 KEGG:ns NR:ns ## COG: MT2535 COG0740 # Protein_GI_number: 15841984 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Mycobacterium tuberculosis CDC1551 # 38 238 6 207 214 243 64.0 2e-64 MTSEEAQFAARADRLAGPRGVVGFMPAAARESALRGAAAVSPQNRYVLPQFSEKTPYGMK TQDPYTKLFEDRIIFMGVQVDDTSADDIMAQLLVLESQDPSRDVMMYINSPGGSMTAMTA IYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLMLPNARVLIHQPAIDQGFGKATE IEIQAKEMLRMREWLENTLAKHTGQDVEKIRKDIEVDTFLTAQEAKDYGIVDEVLEHRS >gi|197324945|gb|DS990229.1| GENE 1265 1323459 - 1324040 771 193 aa, chain - ## HITS:1 COG:Cgl2360 KEGG:ns NR:ns ## COG: Cgl2360 COG0740 # Protein_GI_number: 19553610 # Func_class: O Posttranslational modification, protein turnover, chaperones; U Intracellular trafficking, secretion, and vesicular transport # Function: Protease subunit of ATP-dependent Clp proteases # Organism: Corynebacterium glutamicum # 1 184 6 189 197 224 57.0 7e-59 MADGDMPSMPDPIFNRLLKDRIIWMGEEVKDDMANRICAQMLMLAAEDPKKDIWLYINSP GGSITAGMAIYDTMQLIQPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSG GIGGTTTDVRINAELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTATEALEYGFVD KIITTHDSMTKGE >gi|197324945|gb|DS990229.1| GENE 1266 1324234 - 1324368 78 44 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283330|ref|ZP_03646652.1| ## NR: gi|224283330|ref|ZP_03646652.1| hypothetical protein BbifN4_05825 [Bifidobacterium bifidum NCIMB 41171] # 1 44 1 44 44 79 100.0 1e-13 MSAVPEVLRTTVSFAQHDIDSITIDNRSEVIFAYPQRTEDGHFF >gi|197324945|gb|DS990229.1| GENE 1267 1324575 - 1325978 1784 467 aa, chain - ## HITS:1 COG:NMB0982 KEGG:ns NR:ns ## COG: NMB0982 COG0038 # Protein_GI_number: 15676874 # Func_class: P Inorganic ion transport and metabolism # Function: Chloride channel protein EriC # Organism: Neisseria meningitidis MC58 # 45 462 16 377 380 134 30.0 3e-31 MEKTDWKRIGWLTAATLVLGAIIGACAGLLTLLLYGVEYVMLGFIESEFIPGAFTVPAVR RIASVTLGLGVAGVIWYLLRTKTEKVPSVKKAVNGGRMPFWQTIVHVVLQIFIVGSGASI GREVAPRELGAMLAQRFCDIFHIGDGEGDAHGVLDRRMVVAVAAGAGLGGVYNAPLAGMF FAVEILLVDVTLEKVAFGLGMSATAAFVATAIKGEHMFYDIGAMQMNSTPSLMLFALLCG TACGVVGALFRKGSQWAESHKPTGRSLMWQMPIAGLVTGLVSIVVPQVMGNGRAAAQLGF STFIPETAATSGAAQSAASAAASPWTFLAGSDGAPGSVVNAGTPLELNRLWMLLGVLALT FVAKAFVTLMTIRSGASGGVLQPGIALGSTLGTMLGLLWLFVFPVDSVTACALIGAAALL SASQQAPLMAMCLVMELTEAPIEFFVPVGMAVAASAFVSSGLLHRLG >gi|197324945|gb|DS990229.1| GENE 1268 1326184 - 1327569 2226 461 aa, chain - ## HITS:1 COG:ML1481 KEGG:ns NR:ns ## COG: ML1481 COG0544 # Protein_GI_number: 15827779 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) # Organism: Mycobacterium leprae # 1 448 1 462 469 255 38.0 2e-67 MKISVRNLEPTKVKLTITVDPEEFNPYLDAARKEIAKQVNIPGFRKGHVPGKIIDQRIGF AAVAGEAVNNGVPELYSKALEEKKIHPMSQPEIDVQEVPESAKDETKLKFTATVERRPDI ELPELDGLEIDVPKAQVTDEDVNNRLESLRQRFGTLVGVDRPAAKGDFANIDLDAQIDGE SVDSQEGVSYELGSGTMLDGLDEALEGLSAGEETSFNSKLQGGEHEGEEALVKVKVNSVK TEELPELDDDFAQDASEFDTLDELKADVRKAAERDAEGRQATEARDAFIAKLEEGAEIPV PKGVKADMLEQQLKNVTADPSKATDEQKADAEKQVVKELTDQMVLDALAEKLDVKVSQAD VTNFLASIAQQYGMDPSAFIQAIVKNGQLGSAVQEVGRSKGLLAGMRAVTFKSEGETLDL SSFLGEAAEDEESESVEAASAAAAVADELAKKDDENTADAE >gi|197324945|gb|DS990229.1| GENE 1269 1327622 - 1328908 1302 428 aa, chain - ## HITS:1 COG:MT2755 KEGG:ns NR:ns ## COG: MT2755 COG0349 # Protein_GI_number: 15842219 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribonuclease D # Organism: Mycobacterium tuberculosis CDC1551 # 4 419 19 416 438 218 36.0 2e-56 MTDEPRLQTQPRGGVPDVTDTLEGFREVCDRLAGAAGPLAADAERASGFRYGHEDWLVQF KREGAGIVLLDPVALTRAGADWGMFNDAVGDAVWILHDSLQDLPGFADIGLTPQALFDTE IAARMLGLHRFGLAAVTEHYLGVTLAKEHSAADWSYRPLPRDWRNYAALDVELLIELRRK MQRELKSQGKDGWADEEFRYALQTGMGPRREHPVPWLRISHINTVSQDHQGLAVAKALWE KRDELARAYDIAPGLLLSDDSIVEAASRKPRNAREFRMIRSLNERVRMRTGGEQDKMFER YAPIQRKVKPSVWRETIRRALELPPSQWPVMPAPVADEEHANAPRSMKLWATRHPQRMRL LQDVRKVVSQIADDTRTPAEIIVKPQILRNLCWTDEPRKRDVAEFLKSQGARDWQVNLIA ASVSRVIM >gi|197324945|gb|DS990229.1| GENE 1270 1328898 - 1329488 467 196 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1233 NR:ns ## KEGG: BBPR_1233 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 196 1 196 196 375 99.0 1e-103 MRHPDADMPERPVGVPDAVWSAVESVRSMPRVTGMRYRELPVPSTLADYGIGVEMECVAD DDSRSFGDAHMASGWIMLLYVEREREDWHSHWRCVAYAQLPLPSDENDGLAPSMYWDGMR SFVDDASLGDVSGTVTVTQNTSFGLAQEGTAGCEMRVSWTPLASMDGGLDAGGQVQCWAR FVQSASECEEEPSVDR >gi|197324945|gb|DS990229.1| GENE 1271 1329403 - 1329699 65 98 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MERTDSTADQTASGTPTGRSGMSASGCRIVAEPLGNAKISAIYTGYGVVEDFTVFPHARL CRFSSPTPQRTIPYQYTTNPCDWNCSVTRFFNAADGPF >gi|197324945|gb|DS990229.1| GENE 1272 1329624 - 1330505 1232 293 aa, chain - ## HITS:1 COG:VC1869 KEGG:ns NR:ns ## COG: VC1869 COG1180 # Protein_GI_number: 15641871 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyruvate-formate lyase-activating enzyme # Organism: Vibrio cholerae # 53 288 4 243 246 197 40.0 2e-50 MSDIAQFRTTRPHMLKASKEYASQTLMGGLSGFESPIGLDRRDRIHALKSGDIGFVHSWD INTSVDGPGTRMTVFMSGCPLRCQYCQNPDTWKMRDGQPVYLDAMIKKVDRYKDLFKATH GGITFSGGESMMQPAFVSRVFHAAKEMGVHTCLDTSGFLNTNYTDEMIDDIDLCLLDVKS GDEETYHKVTGGLLQPTIDFGRRLAKAGKKIWVRFVLVPGLTDSEENIENVARICESFDG AVEHIDVLGFHQLGRPKWHELRIPYPLEHQKGPSAALKKRVTEQFQSHGFVVY >gi|197324945|gb|DS990229.1| GENE 1273 1330697 - 1333072 3876 791 aa, chain - ## HITS:1 COG:HI0180 KEGG:ns NR:ns ## COG: HI0180 COG1882 # Protein_GI_number: 16272145 # Func_class: C Energy production and conversion # Function: Pyruvate-formate lyase # Organism: Haemophilus influenzae # 13 786 8 770 772 826 54.0 0 MTAVDATALTAEELQAKAWDGFVEGDWQKDIDVRDFIQKNYTPYTGDESFLADATDKTKH LWKYLDDNYLAVERKQRVYDVDTHIPASIDAFPAGYIDSPEVDNVVVGLQTDVPCKRAMM PNGGWRMVEQAIKEAGKEPDPEIKKIFTKYRKTHNDGVFGVYTKDIKIARHNKILTGLPD AYGRGRIIGDYRRVALYGVAALIKFKQRDKDSVPYRNDFTEPEIEHWIRFREEHDEQIKA LKQLINLGNEYGLDLTRPAQTAQEAVQWTYMGYLASVKSQDGAAMSFGRNSAFFDCYFER DLQSGKITETDAQEIIDNIVMKLRIVRFLRTKDYDAIFSGDPYWATWSDAGFGDDGRPMV TKTSFRLLNTLTLEHLGPGPEPNITIFWDPKLPEGYKRFCAKISIDTSAIQYESDKEIRN HWGDDAAIACCVSPMRVGKQMQFFAARVNSAKALLYAINGGRDEMTGMQVIDKGIIEPIA PEADGTLDYEKVKNNYEKALNWLSEVYVKALNIIHYMHDKYAYESIEMALHDKEVYRTLG CGMSGLSIAADSLSAVKYAKVYPIYNKDAKNLEGHEYEYVEGADDDLIVGYRTEGDFPIY GNDDDRADDIAKWVVSTVMGQVKRLPVYRGAVPTQSILTITSNVEYGKNTGSFPSRHKKG TPYAPGANPENGMDSHGMLPSMFSVGKIDYNDALDGISLTNTITPDGLGRDEDERIGNLV GILDAGNGHGLYHANINVLRKEQLEDAVEHPEKYPHLTVRVSGYAVNFVKLTKEQQLDVI SRTFHQGSVTD >gi|197324945|gb|DS990229.1| GENE 1274 1333192 - 1333428 354 78 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1236 NR:ns ## KEGG: BBPR_1236 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 66 16 81 93 117 100.0 1e-25 MTDKQWYFNTKTEQPELGMLSPSSHRMGPYKTREDALEAWKIVKERNALWAEANRKWRKW GENTPSGGRDDGFDDRDD >gi|197324945|gb|DS990229.1| GENE 1275 1333506 - 1335203 2316 565 aa, chain - ## HITS:1 COG:mll0818_2 KEGG:ns NR:ns ## COG: mll0818_2 COG0171 # Protein_GI_number: 13470971 # Func_class: H Coenzyme transport and metabolism # Function: NAD synthase # Organism: Mesorhizobium loti # 259 565 2 297 299 263 46.0 7e-70 MTHLRFALAQIDTCVGDLDGNADKIMHYAHLAAHEGAHVVIFPEMTLTGYPIEDLALRRT FRKAAWDKANWLATELEADGLGDLYVAVGTVGTDHASDKPRNRMVVLHDGMVWAGYDKHF LPNYGVFDEFRIFAAGDRTVVLDIDGVRIGVAICEDIWQDGGPVARLADEHIDVLMTMNG SPYEEGKTHTRYDLAVRRAAEVGAPMIYVNQVGGQDDLVFDGGSFVVDRDGTLLERSPMF MEHLGLFDLDTDAEHQTTGDIADLPDPDEEVYTACVLGLKDYMAKNRFSGVCLGLSGGID SALVAAMAADACGGHNVHGISMPSMYSSIGSKDDAADLAANIGAHYDVQPIEPMFNVYQG QLKLEGVAAENLQARIRGVIVMAYSNSLGLLAVATGNKSELACGYSTIYGDAVGGYAPIK DLLKTRVWELSRWRNRAAAAGVGIGGLRIVGNENGDAGTPLPGGVMIPVSSIEKAPSAEL RPGQKDSDSLPEYELLDKVLAAYIEHAHGRADLLADGFDEKTVDTVMRLVDRAEWKRRQY PLGPKVTALAFGRDRRLPVTNAFRE >gi|197324945|gb|DS990229.1| GENE 1276 1335286 - 1336437 1314 383 aa, chain - ## HITS:1 COG:L182020 KEGG:ns NR:ns ## COG: L182020 COG1473 # Protein_GI_number: 15672938 # Func_class: R General function prediction only # Function: Metal-dependent amidase/aminoacylase/carboxypeptidase # Organism: Lactococcus lactis # 10 383 9 379 379 301 43.0 2e-81 MVEHVGVTDELIGIRHYLHQHPERSFKEVETSAYLARLLRGHGIDVLDTTLETGVVALIE GEVPGPRIALRADIDGLPITEDTGLPFSSLNPGVMHGCGHDLHMTGLLGAAFWLADHRDR IAGSVKIVFQPAEEVGLGARTVVESGATDDVKAIIGTHNNPNYAPGQIAIGPQPMMAGCV KFKVTLHAQGTHAGYPQKGTGPIEALASMILALQTIVSRNISPSHAVVLSITEVHGGHVW NVVPAEAGFQGTVRFFDQDDERLVHRRFVAEVEHTAEAYGIAADVDWDCIQVPLVGDEEL SEAVAADVPSYAALKPIHPSMAGEDFVEFSGCGARLVFAFIGSNGEPGCADWHSPHFVGV DGAIGPAVDFYVNASLRVLAELR >gi|197324945|gb|DS990229.1| GENE 1277 1336474 - 1337025 322 183 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1239 NR:ns ## KEGG: BBPR_1239 # Name: not_defined # Def: ATP-binding protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 16 183 1 172 172 265 95.0 6e-70 MTAATQQAGSPDNEPVRVNHTVRNIVIALIVVAVMSAGRVVERGDVCNVFAAPQQAVTKR FIDTVSGSAIGSITYEFSGDDALVRDFLGGAVTFQRCHRLRHGGGPHRLRGRHRRSRPRQ TRRRRDESLVPCVRHRRPPDRLDGYQKVDQTVTWTAVIIMIVLVQIVQGIANAIAKRILK LQR >gi|197324945|gb|DS990229.1| GENE 1278 1337177 - 1338028 1098 283 aa, chain + ## HITS:1 COG:lin1028 KEGG:ns NR:ns ## COG: lin1028 COG0561 # Protein_GI_number: 16800097 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 23 283 3 256 256 125 35.0 1e-28 MASDDIMTAGAGGATATVRADIKAAFFDIDGTLTSFVTHVIPQSSIDALHELQDRGVKVF ICSGRAPSHMTVVLDMMPVHFDGIIALNGQYCFDDHGLLEKESLLPEDIVTITRWLDEHP DVVANYCEKDYVYFNQITDAMQATWRQLGKTAPTVNIDDPHERALKYETFQISPYISFED EAKLSGMCRNVRGVRWHPDFTDLIPADGGKPEGMKRFMRHYGWTREQTIAFGDGGNDADM LAFAGIGVAMGNATEPAKAAADYITDDVDHDGIMNALKHFNVL >gi|197324945|gb|DS990229.1| GENE 1279 1338174 - 1339259 888 361 aa, chain - ## HITS:1 COG:Cgl0034 KEGG:ns NR:ns ## COG: Cgl0034 COG0652 # Protein_GI_number: 19551284 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family # Organism: Corynebacterium glutamicum # 180 359 14 188 190 160 53.0 5e-39 MTTSAPATTKKNVDTEVQYAESVIAWNVKMLLTAQNKSQSALAAFLGIQRPTMTNKMKGR IAWSVADLVKSADFLGTTAEALMDDSLMSQLKNGYTESAKPKYGVFAEKPGALVGVGSPR FLVSPFNPDAPIEGGISGAAKGALAGFVSSGVPSGSSSPSMPSKHDGIGVPARSQAHETL GTMTTIIMRTSEGDITINLFDDQTPVTVKNFLGLATGEKEWTDPFTGQPSHEPFYNGLTF HRIIKDFMIQGGCPLGNGTGGPGYDFDDEIVPELTFDRPYLLAMANAGLRRGRDGKAHGT NGSQFFITTVPTPWLDGHHTIFGEVAEDESKAVVDKLEAVPTDRSDAPLEPAGIMSIEVV K >gi|197324945|gb|DS990229.1| GENE 1280 1339353 - 1339595 283 80 aa, chain + ## HITS:1 COG:no KEGG:BLD_0394 NR:ns ## KEGG: BLD_0394 # Name: not_defined # Def: Xre family transcriptional regulator # Organism: B.longum_DJO10A # Pathway: not_defined # 13 80 3 70 71 89 58.0 3e-17 MKKQQGVKGTSDMKEWLKAKGISYRRLAVSMGSSAATVCKKLNGETPWQQRDLLFFHDKF GLSSDFVLGISSDADREEIA >gi|197324945|gb|DS990229.1| GENE 1281 1339595 - 1339963 307 122 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1199 NR:ns ## KEGG: BLIF_1199 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 122 1 122 122 220 91.0 2e-56 MAGGIYEQSEWPDSRWDCVTVCDSCYTVVWGTFWDDYDSAARDAYFARNGWRNYCVPGDT EILELCPDCAVRALRRGETRGLADTWLHPTHAYTHAFREVDAQLSARERMVAGLLLTEGR AS >gi|197324945|gb|DS990229.1| GENE 1282 1339960 - 1340673 141 237 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|225351317|ref|ZP_03742340.1| ## NR: gi|225351317|ref|ZP_03742340.1| hypothetical protein BIFPSEUDO_02910 [Bifidobacterium pseudocatenulatum DSM 20438] hypothetical protein BIFPSEUDO_02910 [Bifidobacterium pseudocatenulatum DSM 20438] # 4 235 40 273 275 427 88.0 1e-118 MSNEVSCDSVARRVNGENPLDVLVGVSTPYGPLLTDDYGRPIRFAEYGDGPCRFGDRPIQ VMKPYEWLADRVYVFDDEAVAPFKDDVARFVVEACRCFVGGDGDHDRSVVLCREGVAEQL DLSSDAFTPMVGSDGNAVSFSYQPCDRLRCVCSTNPQKGLGVFHVWTERGATYQAVLGPC AYERRPEKALTLPDELWSRNESWMRDFFEQETSDFLCLGVVSRRTNIRFVEGGGARG >gi|197324945|gb|DS990229.1| GENE 1283 1340724 - 1341500 466 258 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1198 NR:ns ## KEGG: BLIF_1198 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 159 258 1 100 100 201 100.0 2e-50 MAIDGVGVLAMDSGAGGMSDEAGRLVFSRDPSGTFIDGMVFGTSGGGENANLEVLCALPY ELVRPHASASVLGPLVGVGNVKRLSLSVKYLDGEISVGRYDRVSGFLVEQARALVGGDAE YQFSAVVCRPGVAERLDLRSEAFAPMLPDDRDPFDDGCMLGESLSYLCGMDPARPGAVYE RLGYAKGWLDEGRAYQTVLSPYAYVRRPDRSIVVSDDCWDALIEVFDVPDEQALDCLCLA IRCGGAWPVDGEGGGAMV >gi|197324945|gb|DS990229.1| GENE 1284 1341675 - 1341866 270 63 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140498|ref|ZP_07802691.1| ## NR: gi|313140498|ref|ZP_07802691.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 63 1 63 63 118 100.0 1e-25 MNDLTKAFRMSCSVSPECNRDFHASVWTFPVVVAFARHNGPGSVDSRRLASMMAHPSMEG RLA >gi|197324945|gb|DS990229.1| GENE 1285 1341863 - 1342018 87 51 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1197 NR:ns ## KEGG: BLIF_1197 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 51 1 51 51 77 92.0 2e-13 MNWLAIALIVFVAFSWLMTLALCRTARLGDEMHARLADERRAAQQREENRP >gi|197324945|gb|DS990229.1| GENE 1286 1342015 - 1343145 1168 376 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1196 NR:ns ## KEGG: BLIF_1196 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 376 1 376 376 671 96.0 0 MSNIALSWAFKCHVGNASAKAVLVYLADRADDDGTAAYPKIATIVNVTELSERTVRTALK TLQERGFIRRGDQRYARLGKGGRNRLPQYCQIVWDLAVESDPSTLEWIKETHTAEQDPMT MGNTVDPAASTIMENGESKDVTPENAGTKPISSTANLAGLENDPEPALQISHLQHCESCT PSTANAAGLPYKDKTLQVNPPSKPSFPSAPTGHLPVSGATAAEKTETEQSDEDDTEIAEA AGRVLASLGEQRSMLGLATPSPTKADRKAIIGLYRRLVDRGAQWPTLVMVDAIGFAMNGD WWPKRIRTGRALARRWDELNDDMILAAGRTDGDAHAQAVPAAVPEPDAAPWLPDWAVETL AELDGQDATAGGEATA >gi|197324945|gb|DS990229.1| GENE 1287 1343142 - 1343396 282 84 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1195 NR:ns ## KEGG: BLIF_1195 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 84 1 84 84 143 86.0 2e-33 MTTRIDCSEAGFSEFLLANPQLDGHEDLIWQLHAVYWRNKRLGHPKAVGLLIQYARAWAA RNPGETAIGRLQARKTPMTQGRRP >gi|197324945|gb|DS990229.1| GENE 1288 1343411 - 1343890 383 159 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1194 NR:ns ## KEGG: BLIF_1194 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 159 2 160 160 260 86.0 1e-68 MPACARIAAVDPAMADRMWNTTTDDDGRDLVDERMRGKGRVLCAACPMRLDCISRALVNG WKDKAVYGGLDYASRWTLARLIARDLHIADGGLHRIPQSRVRDWLAEHPDWAERMRRDGR DYWRRTKRRQRSRREYTHDDPLFLPTEPVPKGLVQGSLF >gi|197324945|gb|DS990229.1| GENE 1289 1344003 - 1344674 941 223 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1193 NR:ns ## KEGG: BLIF_1193 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 223 1 223 223 394 93.0 1e-108 MNDKKNREPMVIALATGKGGSMKTTSAVFLACALVDQSRGEQRVLVADADVQGDAKDWWY RAAELDDPLPFDVMSAAPADIAHLHGINGRLDDPVDWVLIDSAPYGRALDESVNNADLVV IPSSPSRIDLDQAAGVKDLCDRRGVPAAILLCRTEANTTALRDALAWIDDAGIACFETLI PKRQDILNAKSTRPRGSRLHEYRDLAAELKQTMRQLKDEEEDL >gi|197324945|gb|DS990229.1| GENE 1290 1346076 - 1347389 1181 437 aa, chain - ## HITS:1 COG:no KEGG:BBMN68_335 NR:ns ## KEGG: BBMN68_335 # Name: not_defined # Def: HipA domain protein # Organism: B.longum_longum_BBMN68 # Pathway: not_defined # 1 435 1 435 437 759 87.0 0 MPRKLIMCGDHPVLAFEYDPESGRACSSGEVLDHDRLPLEFTTHGKSALYAKRIDEWWRS RAIPSTRDGIRRVLESLGASSTGELLDRTYGLSLSDQYWVKREDDPVEWKGINFFDNPFD EALGEILLTSYSSSHDISLNAPDVSTGGDLPKRWTIDKNTGRRLLVKSGRTGQEPMNEVI ASKLCVRLGVPAVPYSPARSGNRLVCTCADMLTSHEELVSAWQVLQSVKTTNGLNSHDQW IHAAVGFGVGEREIRDATDDWLVADYLMRNTDRHYNNFGLIRNIETLAVRPAPIYDTGAS LWSGELDVDGRDWFAKPFYTATGRPSALRQLRLVEDWSRFDLDALSDWPDEAAHELSRMR MFAPERLDAIRDQLAKRIGMIRRIRDDKSLRASGPIRNRADLLDRFGDTLRKNLARQDGD GKSAGIDYKGPRHHMGH >gi|197324945|gb|DS990229.1| GENE 1291 1347432 - 1347800 499 122 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1154 NR:ns ## KEGG: BLIF_1154 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 122 1 122 122 149 87.0 4e-35 MFGLYMLAVYLGIAIIAAGFVALLVVVALAVGLVTHPIRTLALVFHKLAALAAGLALMLA LIAWFWTDHSKSDFVPCFWGSIGVIVASILIRMLAEWILERPTRAERRAMKRAAAPTFDS RL >gi|197324945|gb|DS990229.1| GENE 1292 1347822 - 1348223 550 133 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1155 NR:ns ## KEGG: BLIF_1155 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 133 1 137 137 157 83.0 1e-37 MAEGDWSESKAWMRATRERIGMTQHDVAVLANLTVDMVKKYESEKYRIQPSERMREMLEH YLAEHRRAVAAIVERHRGEERATLSFSRVSDLPDWIKAEASAKRHAAAVREAAVLLEAAG VAVDYTYMPEGTK >gi|197324945|gb|DS990229.1| GENE 1293 1348331 - 1348798 509 155 aa, chain - ## HITS:1 COG:no KEGG:BDP_0920 NR:ns ## KEGG: BDP_0920 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 2 152 44 210 235 130 52.0 2e-29 MRVQCKSPNTLLGVIPLGSSTQTIPLRNIASVDTNIFLIAGLACMKDSALVGILFLVLAA ANLANTMSAQLDFVNQAGGRNTVKVSILKKAKLMQLAQAIQQLVFADVEGQRHQESMDMT QKQYAAQTNSVLIQQQMLDQQRKANAGDNPPTPTE >gi|197324945|gb|DS990229.1| GENE 1294 1348892 - 1351099 2401 735 aa, chain - ## HITS:1 COG:CAC3567 KEGG:ns NR:ns ## COG: CAC3567 COG0550 # Protein_GI_number: 15896801 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Clostridium acetobutylicum # 3 680 5 653 709 361 34.0 2e-99 MRLIIAEKHSVGQAIAQAVGGHAEKHDGYIQVGGDLVTWAQGHLVDLAAPDEYKNHDWGK WSLDTLPIDPTPDWQWKVSRDKGADRQYKVVAGLMRRGDIDMLVDACDPDREGEAIFRRI VAHVGVSKPMRRLWVASLEEDAIRGALASMKDETEYQGLADSAMIRAKADWLIGMNASRA YSLVYNARFTVGRVQTPTLAMIVDRDRQIAGHVARPYWKVVAPMGGWKLTGERLDKRENA ETLLRIVNSDDFTFQILKAERKQQHDAPPSLYDLTGLQKDMSRLHGLTAARTLTALQSLY EKRLTTYPRTDSRYITHDDLDTLRGLAEGDRLVTGFIEPSAKPERPRLELTVNDAKVAGH TAILPTMQADKAALDELGDDERLVLTRVARRMWEAVGDDYVHDVTNVVANIDPHWCEKHP DEGRLLPESECRFTSRSDQPVSPGWHAIEHAAPQEDQDDTDETAGNIIPVNLTDGVFIAP VPQDGATLSEGKTKPPKPFTEATLLAAMEHASRWVEDKELKAALDDDESHSGGIGTPATR ANIIEQLVHSGYVDRKGKQLRSTEQGRSLIDVVATKLKDVALTAGMERRLSEVEHNHADP AQVETEFRDLAVRIPADARSAVRQDHVQTKTRNTESFGPCPRCGKPVIKTGKVFQCSTNR REKQSDGTWRTTEGCGWRAWTTVAGKTVTDSAIRRLLAGRKVSLKGFTSKKGSKFDASLV VDKDRGVIFDFGNKH >gi|197324945|gb|DS990229.1| GENE 1295 1351119 - 1351550 737 143 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1157 NR:ns ## KEGG: BLIF_1157 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 143 1 140 140 183 90.0 2e-45 MASDYVDDFLRDERESFKRKEVAAKKFDSRLDNFRKSAQALRDAARQFEEAFPGMSRTMI ADKLAMTGTEKNVAFDAKGELVAAPAGRKTPPAEPEPETVAESDPETTGSDVQAADDETA PQEAAAEPDTSDDGRPAWASGNY >gi|197324945|gb|DS990229.1| GENE 1296 1351959 - 1352255 235 98 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1158 NR:ns ## KEGG: BLIF_1158 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 95 1 96 100 115 62.0 7e-25 MEKKSTDLQHVVFETEEAGRVEAMWSSLRLNGQDVPDGWHRYAVRGGDDGWEPCSIEPFV WVNHTADIITPVDLELDKHDRMLTIRDWWFDDEPFPAE >gi|197324945|gb|DS990229.1| GENE 1297 1352346 - 1352627 342 93 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1161 NR:ns ## KEGG: BLIF_1161 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 12 93 1 82 82 154 91.0 1e-36 MEYNESQEATDMTIDYSIKVTQCEPMPGYKLKVTCSDGATGIFEMSRYVERGMFKPLKDT QTFDRVRLTFDVPSWPGDIDIAAERVRSGMQII >gi|197324945|gb|DS990229.1| GENE 1298 1353078 - 1353458 359 126 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1162 NR:ns ## KEGG: BLIF_1162 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 49 125 1 77 78 121 87.0 7e-27 MSRAENRTHCVEKIIRFTPDEWERVRNLYEELTRYAPEHRSFSSYARRMLSERRIHVTEI RPLTDPEPIAREIDRIGVNVNQIAHWANANEHITPAQVEEIRASFDRIERLLGDLFADRR EARKDA >gi|197324945|gb|DS990229.1| GENE 1299 1353461 - 1355089 1855 542 aa, chain + ## HITS:1 COG:SP1056_1 KEGG:ns NR:ns ## COG: SP1056_1 COG3843 # Protein_GI_number: 15900926 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Type IV secretory pathway, VirD2 components (relaxase) # Organism: Streptococcus pneumoniae TIGR4 # 21 165 19 174 402 80 32.0 9e-15 MAVVKLGKPVKSNLGGLNGAMAYIINPTKTDGGRLVSSNYERTRTDYDALAEGMLDDNRR SPKGIRKDSRLAYHIKLSFSPDDPVTPERVHELGVEFARRITGGEYKFVVATHTDRHHLH DHIMVCAASRYEKHLKAELPKDIIDQWRAVSDEICRREGLSVVFNPVVEEQTRKMRGGTT AAGDAGTSPARDPKYVDEAPVRSANEPETKARKASGGEPLERRYGMSMEEIYASAKGLGV KDRLRMLIDLTSSTAENFEDWKDILDIRGVDVTVRGQHLTYTLKDTGFKIRDAKLGQAYD MTNIMAGLQSTPVIPITFNRRLVAKQTRKTITVWLPGTHRKKKITFDAKRLVDDGGSTLR AFLPRDRDQIILDPSNRYAGKTPTPGLYQWFGEPTSRLEPLTSPERLPLRYGVSPAQQRY YQAQARRLDRLAGEAKALNAAIRWTRLAGGDSAKGLGLLRAKVRESHDELQSAVIALHDA IQRGDPDLVAETRGEMERREALCNRYEGELSAIEREIHTTRDREQTETEQHEQQQHKRGR SI >gi|197324945|gb|DS990229.1| GENE 1300 1355133 - 1356185 974 350 aa, chain + ## HITS:1 COG:no KEGG:BLIF_1164 NR:ns ## KEGG: BLIF_1164 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 350 1 357 357 497 86.0 1e-139 MPIEEQAEEKIQNAVQTIITGGAKLMLRIPKGVAMAMLRSGMKLTKTGVYAAGEAVKNKI DSGEMSEKRLQRKKDGDLHELQLDDSTMREVQHSLKTAGIDYHLERADQGQFILHFAGKD EDHVRHAVQRAFKGMGLDVTDDDFTVEQTEQTRNEPEPPARETPAEPATKPMPTQRIAWD FVDPEVMEMAANSLTARHPELSWDKLMGDTTCDEQAGRNFADRIIGKAAADPSLRDELDD ILRDDYGQGAQTQERTRKQTTEPNRKTPTSKPESEPEPAPDEARTPATRQQTQARADNPR PAGKEQKPKPIRSKKALLERFKTRLNENLAEQKNHMPPTQNRDRTPRKGR >gi|197324945|gb|DS990229.1| GENE 1301 1357589 - 1357804 142 71 aa, chain - ## HITS:1 COG:no KEGG:Blon_0983 NR:ns ## KEGG: Blon_0983 # Name: not_defined # Def: phage integrase family protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 11 71 387 447 447 92 86.0 7e-18 MARRSALDHEHRRDVAERLALEYLPAEEPAGIKAQIARKEEEIDQLRQAVAGLRRRLEEL EDDGRERNQVG >gi|197324945|gb|DS990229.1| GENE 1302 1357998 - 1358189 204 63 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1201 NR:ns ## KEGG: BBIF_1201 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 63 1 63 63 92 100.0 5e-18 MFGAISESEMRRRTENVGLSVQSVRLEGGDVTRAFMRDAGEYARGTIDGTELLARTRRRY GLE >gi|197324945|gb|DS990229.1| GENE 1303 1358192 - 1358959 637 255 aa, chain + ## HITS:1 COG:XF1657 KEGG:ns NR:ns ## COG: XF1657 COG2184 # Protein_GI_number: 15838258 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Xylella fastidiosa 9a5c # 6 174 9 176 203 120 40.0 2e-27 MVRVFDPYLIPGTNVLRNLVGATDEDALAAAENDLCSARAAILRENLPPAEGTLEQLRRI HRFLFRDVYDWAGEVRTIDMGKGEGLPFQPLELFSIGVRYSEEVLRADDLLKGLGHDEFV KRLSVSYNNFNILHPFREGNGRTQRIFWEIIAREAGWHFDWGLIDKRTNDQASIAGMQRN DLRPLEDMFRRIVKPLSEPLTMSNDLAHLGEYAQPANTAYGMSFEQRRHVYEHYSYQRTV VSPGQGKPERGHRAR >gi|197324945|gb|DS990229.1| GENE 1304 1359107 - 1360435 1196 442 aa, chain - ## HITS:1 COG:MT2735 KEGG:ns NR:ns ## COG: MT2735 COG0582 # Protein_GI_number: 15842199 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Mycobacterium tuberculosis CDC1551 # 11 401 18 378 386 103 29.0 7e-22 MKDTENRPPSRKRRKWGSVIVRRDTDGNPTSFQARYVNPLDPPKKVGRNFGLEYETEAYK WLDEERYLVTLHNKGIRQWVHPSQRGAGTMPTFREYSKDYFDGYRKPDGSKLSGRSNRCN EIVLRRLNETFGDTPLDRITRQMVDEWYVNARDELTAWTFEQAARTLKRIMLAAANEQAD GTPPLIPASPCRYRVIKPQSKRRDQPPVTADEINRLATLFPDYQRLALWLSLLAGGLRIG EVCALQLRDIDLENLQLHVRHSVNRGPDDRGKYQLCEPKTKSSKRVVPIPKPLAPLIEDH ISRFCKDRKPDTMLFHSTMLDDWLLPPTTIERTFRMAREKIGRPDITFHSLRTTHATMLV LEGGTMRETMDDLGHTSLTVAVDSYQRIVREHHRDTVELLAYRYMPSNYPTVIRTVIDQK ERQIDKLRSEVDRLRKILQEKN >gi|197324945|gb|DS990229.1| GENE 1305 1360582 - 1361688 264 368 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148987750|ref|ZP_01819213.1| ribose-phosphate pyrophosphokinase [Streptococcus pneumoniae SP6-BS73] # 7 344 11 312 317 106 29 4e-21 MGQQYSHLSSEERILIEKLHCEQHLSIRRTAERIGRDKSTVSRELRRGLWFASNENGSYR PYRPKRLKTGPWTSGPFYSALAAQRKADRRRRESRKPRRMDSGPLRAWVLDALRRGWSPE LIEGRLKAQCAGDPSMRISHECLYQWIYAKPQRALDLRQYLARGRKRRTRKKGRKAKGPR IPMRVPIADRPEAVGSRKGFGHFEPDTVVGAAPSRRCVNTQVERRSRRLFARLVDDKSAS ATARAEYEIFKDMPPAARVDRTWDNGTEASLHMLVDEALGMLTYFADPYSSWQRGSNENR NGRIRRYLPKGTSFEDLTQDELDAIVGEINDTPMKLLGYKTPNEVWDEEMAKLQSKQADP KPAVALTS >gi|197324945|gb|DS990229.1| GENE 1306 1362290 - 1362886 99 198 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQGANRHNGVEKFQEHCEWVREELGCVSAYARVIAAALLLGDEASKGKARSLLKVDHKRK SLGQKAWNAAWDAWFIQALDGYRLGMLVPPARLEHQSNYVGANAVLVTAKDQVWLDSITD FSVAFSPSAQKEISYPLICSTVTMRNQEAEKCLEEELRRDKLSFPEHIRNGDLIGKMSRA INNLENELNLPVRSFDVD >gi|197324945|gb|DS990229.1| GENE 1307 1362979 - 1363116 64 45 aa, chain - ## HITS:1 COG:no KEGG:BLIF_1148 NR:ns ## KEGG: BLIF_1148 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_157F # Pathway: not_defined # 1 44 11 54 55 77 93.0 2e-13 MTTIIMRTSDDNRGQLFLALFQGFQFLGNLPITLVFHEAPTGTQA >gi|197324945|gb|DS990229.1| GENE 1308 1363258 - 1363554 332 98 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1191 NR:ns ## KEGG: BBIF_1191 # Name: not_defined # Def: addiction module antitoxin, RelB/DinJ family protein # Organism: B.bifidum # Pathway: not_defined # 1 98 1 98 98 181 98.0 8e-45 MAVKERTTIALDPEVKREATDVLERMGLSLSSFTEICLRQAVRDRGMPFTPSLRPVRSDG YPVPPAHDAYRFERSKSTGNIVLPQEWDDPADDIYDHA >gi|197324945|gb|DS990229.1| GENE 1309 1363547 - 1363906 238 119 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1192 NR:ns ## KEGG: BBIF_1192 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 119 6 124 124 240 100.0 1e-62 MREPEVYDVWLMRVEFPDHPGVGKVRPVIVTRVEEDRVSGIVVKVTSVTTWNGPGDVPLL DWRQEGLYKPSVARCSQRFWFGNGDLLKYFGRLSLRDANDLDAGLDATGDVPPHRQSHS >gi|197324945|gb|DS990229.1| GENE 1310 1364088 - 1364288 82 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPGSGGDGGVLPDYFRVPVGASWRTRLIGRFPEIGKPWNRAENDHVRLSCEVRMMMAVMV PSVSWA >gi|197324945|gb|DS990229.1| GENE 1311 1364924 - 1366012 508 362 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1244 NR:ns ## KEGG: BBPR_1244 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 362 1 362 362 615 99.0 1e-174 MTRFRNTYTTLTTFVSAAVLLISTTVPASASPMASDPLSSSTTTAVRAQVTALGANRTYT YVPTNNTSVGDPIVTAYWTPERMKSAIPADTPTSTTEVNRQIDELEQPALADEPVTDGSS PVTAILNAITPQAVTPVTNFSKTNGKVFFRNQTDGKDYVCSGASVNSRSKRLVVTAGHCV HGGPGKDWHTNWIFAPGYSNGATYGTYQAATLRTLNDWINYGESGRGFNSDVAFVTTYSG STSGDTVVNAVGGHGFRWGGGTGFDVSIFGYPTNLSGGQSMWACWGSSQTGWNGLYKFNH ITGCDFGGGSSGGPWLDEYSNTTGLGYVRSVTSNGPADNSYLRGPYFDSRVNDLFVAANK DW >gi|197324945|gb|DS990229.1| GENE 1312 1365943 - 1366293 77 116 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|314924434|gb|EFS88265.1| ## NR: gi|314924434|gb|EFS88265.1| hypothetical protein HMPREF9603_00215 [Propionibacterium acnes HL001PA1] hypothetical protein HMPREF9577_01726 [Propionibacterium acnes HL110PA3] hypothetical protein HMPREF9582_02385 [Propionibacterium acnes HL060PA1] # 1 42 1 42 45 66 76.0 5e-10 MEKKMRTEVSETTSYRFHEDICSLLRSVRCCTSLEDCSGASAAESYPASVPGELGLDSLP LVAHPITVILVKANTRSAATKRLRKRIQLAMMLFHQSLFAATNKSLTRLSKYGPRR >gi|197324945|gb|DS990229.1| GENE 1313 1366292 - 1366477 174 61 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1194 NR:ns ## KEGG: BBIF_1194 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 61 43 103 103 112 98.0 7e-24 MGNPKCHGVRATVDEDSSAVLITLYEGTLPNAPTECAEIAVNASLLLTTRNPIGTRSVIT G >gi|197324945|gb|DS990229.1| GENE 1314 1366587 - 1367039 -150 150 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140526|ref|ZP_07802719.1| ## NR: gi|313140526|ref|ZP_07802719.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 9 150 1 142 142 285 100.0 9e-76 MTAMSTIIMRTSHDNRTWSFSALFQGFRFLGGLPISLVFAEASTGTREQSGDIPPSCRRS TSSPTGTEKERSALWFHDVQHGRCPKAFAQQYVSVSDNRHAGHEAFNVSVAQNHLLDVAV RGWCPARRFDERNREDHGRFGGDIPLFDFD >gi|197324945|gb|DS990229.1| GENE 1315 1367643 - 1369973 3357 776 aa, chain - ## HITS:1 COG:MT2660 KEGG:ns NR:ns ## COG: MT2660 COG0317 # Protein_GI_number: 15842122 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Guanosine polyphosphate pyrophosphohydrolases/synthetases # Organism: Mycobacterium tuberculosis CDC1551 # 24 764 64 792 793 820 56.0 0 MANDEAEHNAARMLGCEISDDPLNPLLPIMQACRNHHPDEDLSILERAYRRAVIQHSSQR RKSGEPYIIHPLAVAQILADLGMGPLVVAAGLLHDTVEDTDYTLDECRAEFGDTVTGLVD GVTKLSKMEYGDSAQAETIRKMVVAMSRDVRVLVVKLSDRVHNARTWRYVKSSSAQKKAR ETLDVYAPLANRLGMNAIKTELEELSFKVLYPKIYNEIVVLVARRAGQRDVYLAQILAEI NEDLDAQHIKAYVTGRPKDYFSIYQKMIVRGHDFANIYDLVGVRIIVDTIRDCYAALGAV HARWSPVPGRFKDYIAMPKLNMYQSLHTTVVGPGGKPVEIQIRTWDMHRRAEFGIAAHWK YKENGQAGRALSTPDKSDLKRGSDDNQELSETDNLKWIQQLADWTSETPDSNEFLGSLKE DLGAAEVYVFTPKGKIVSLPANATPVDFAYAVHTEVGHRTMGARVNGRLVPLDTKLENGD TVEVLTSKSDNAGPSRDWLSFVKSPKARNKIRQWFSKERRTEAIEEGRDELTRAMRKRNL PIGTLLTTQALVGVADELNFPNPDAVFAAIGDGQISTQNVIAHLVKDAGSDEVDEEVEQE ALPLRAVENAKKKTSSLGVSVKGVNDVWVKLARCCMPVPGDRIVGFITRNQGVSVHRADC QNMIDLQRRQPERVVDVAWTSTKGLFMVRIQVEALDRQHLLSDVTRVLADHGVNILSGSQ ATGSDRVAISQFSFEMADPQHLNRLLAAVRKIDGVFDVYRVTGAKDSAVPRLRKMQ >gi|197324945|gb|DS990229.1| GENE 1316 1370123 - 1370599 596 158 aa, chain - ## HITS:1 COG:ML1028 KEGG:ns NR:ns ## COG: ML1028 COG0756 # Protein_GI_number: 15827498 # Func_class: F Nucleotide transport and metabolism # Function: dUTPase # Organism: Mycobacterium leprae # 13 148 3 137 154 141 56.0 4e-34 MAFDETYDEPEYTEVLVKSLDPGHPVELRYAHAGDAGADLVAAEDVTLKPFQRALVPTGM AIALPAGYVALVHPRSGLAVKYGVTVLNAPGTIDAGYRGEVKVPLINLDPEHTMEFHRGD RIAQLVIQRYVEARFVPASTLPGSDRAERGFGSTGVSS >gi|197324945|gb|DS990229.1| GENE 1317 1370599 - 1370892 425 97 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1207 NR:ns ## KEGG: BBIF_1207 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 97 1 97 97 149 100.0 4e-35 MAQDYDSPRNKDEDEESLQELGKGSRSSSTDMDDDENAIAEDYELPGADLSNEDASVTVI PMQNDEFICSECFLVKHRSQLAYVTDDGQPVCEECAA >gi|197324945|gb|DS990229.1| GENE 1318 1371042 - 1372097 841 351 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1250 NR:ns ## KEGG: BBPR_1250 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 351 1 351 351 513 100.0 1e-144 MPENPLTQARFDHVDDTGRLVFASGDERFFVDVDETLERAILEAKQIREESRSAPSASSS ATLPISQIQALIRAGADPARVAERYRLSEALVRRFSSAVEVEKQYAIEQFLTVPAPKESR GRTTADVVERALALSGIGMESVTWKATRRGLEPWKITATFDAAGRTARAEWSWNMHDNAV ACLNSTAKKLLGTATGARGDGTEGTPSEMLPATLPGDSVRSARIERTVSAWNTPAPTLPA ARPEARMPRSASPLDVRTEPAPSEEGPSIDIPRTGALPAKAGEAALGAAESKPPRPTPDS GTSASAAQTAPEIESESGKTSAERSDRQTPPAKRRSGRSAVPSWDEILFGE >gi|197324945|gb|DS990229.1| GENE 1319 1372214 - 1373446 947 410 aa, chain - ## HITS:1 COG:Ta1349 KEGG:ns NR:ns ## COG: Ta1349 COG1524 # Protein_GI_number: 16082335 # Func_class: R General function prediction only # Function: Uncharacterized proteins of the AP superfamily # Organism: Thermoplasma acidophilum # 74 404 60 411 421 83 23.0 8e-16 MENMNAEIASMDELLQTIPTVRYGDWRRDAVRGGALHLSAVLPAVSAAIGHPVATRIHHD PEALRVALGVPKADSVIVALVDGLGYWNLRMRVGHSPYLRALLRDESNDRPIATCAPSTT VAAMAAFGTGTCPGLTGMAGYTQRNTQTGELSQLIQFDNAIAPLDLQREPTVFETLRAAG VRVTSCGLPKFAGSPLTKAALRGADYKGDMRPLGRVRAACEASKTPGLTYLYIRDADKVG HAYGWESEQWTAVFERVDEQLAQLHRLAPRGTLIVIVADHGMVGSDPDQRVDIAENPELA RGVALVGGEPRSLMLYAEPDCDPNDIARRWRDRLGDAALVRTRDEAIDQGMFGVVEPRVR PMLGDVLVSAAGRATFVDSRIQTDKATRLPGVHGSQTALEMDIPCLIDVA >gi|197324945|gb|DS990229.1| GENE 1320 1373595 - 1376267 3105 890 aa, chain + ## HITS:1 COG:CAC0007 KEGG:ns NR:ns ## COG: CAC0007 COG0188 # Protein_GI_number: 15893305 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Clostridium acetobutylicum # 20 764 7 692 830 493 39.0 1e-139 MAHRTTTHQAYDPRQVQEHIVETPLNEEMSKSFLEYAYSVIYARALPDARDGLKPVQRRI IYQMGEMNLTPDRPYMKSARVVGEVMGKLHPHGDSAIYEAMVRLAQPFAMRLALVDGHGN FGSLDDGPAASRYTEARLAPAALGMNADIDEDTVDFTPNYDNKLKEPTVLPAAIPNLLVN GGSGIAVGMATNMATHNLGEVVAAAKHLMAHPDATLEELMRYVPGPDWPGGGIIIGRNGI REAYETGRGTLTTRSMTHFENVTARKKAIVVTELPFMVGPERVLERISEGVKNRKLEGIS GAIDLTDRHNGTRLVIEIKTGFDPNAVLAQLFRHTPLQDNFTMNNVALVDGRPHTMGLKE MLQVWIDHRRIVVRRRSEFRRRKALERLHLVEGLLLAMIDIDEVIQVIRTSDDADAAKSR LIAVFDLDDVQAQYILDLRLRRLTRMSRIELEAERDDLKRRIEELERILASAQELDRVVV DEMDQAVAEYGTPRRTVLLDEAEDGTLTPVTPHGDDSVNAAAMKAAAAAATLSSAEADVA AAAAARKAGEDAAAVAALQIDDEPCTVMLGASGTIARSTPAALDAWESRSTSDERTKDDH IVSIFRTTTRSSYGLVTSAGRLVLAHVVELPALAASPQTNVAGGIPADELIGMTESTDPI PGEHVVAAIPMDQRDDDGPTPAPLAIGTRAGVVKRWNREAPTTMDSWSVIDLKDGDSVLF AADAADEDRLVFIASDSSLLTFDAGNVRPQGRTAGGMAGIRLAEGCTAITFNVVPAGKIA WTYEEGDNGMFSASGAVVLTVAGDKDALPGTENGAAKVTPLEMYPTKGRGTGGVRSQRFL KGQNTLIFARVGMYPLHASTEGGSPVELPKPDMRRDASGVDLAAPVAFCG >gi|197324945|gb|DS990229.1| GENE 1321 1376495 - 1381120 3115 1541 aa, chain - ## HITS:1 COG:ECs2362 KEGG:ns NR:ns ## COG: ECs2362 COG1201 # Protein_GI_number: 15831616 # Func_class: R General function prediction only # Function: Lhr-like helicases # Organism: Escherichia coli O157:H7 # 2 1006 13 928 1538 917 50.0 0 MNLFSGPTRAWFKHAFDVPTAAQSQAWPVIHAGGNALVVAPTGSGKTLCAFLSAIDRLMT GETDRLNGSGAMTAPKGAADVSRERRRTRRVKVLYVSPLKALAVDVAKNLRAPLDGIAAE CEASGLAAPDIGIAIRSGDTTTRERRAIASHPPDILVTTPESLYLLLTSKARVILRDVET VILDEVHAVAGTKRGAHLAVSLERLDALAGHATQRIGLSATVRPVDEVARFVGGIHPVTV INPQERPAMDLRVVEPLENMRDLQSANVPGRAGGVGASAASAPHISGVTPAMRRLAERRG LPVSPDRRSSPEDSQYDSQAITGAAGDRAGGSIWPVIERDVLDQVLSHRTTLVFVNSRGL AEKLTARLNDLYAQDHGTDAVQAQSPEGRSGFSRHYDPVVGSTTMLARSHDDGDVIAMAH HGSVSKERRKRIEEQLKHGLLRCVVATSSLELGIDMGSVDLVIQISPPLSVSSGLQRIGR ADHRVGGVSHALIYPLTREQIIGAAASVESMRAGDIEPISVIRNPLDVLAQQTVAAASME DLRPDDWYATVCRSAPFRDLDRGTFDSVMGMMTGAYDSEDFSAFRPCLMWNHDEDLISAR PGAQRLAVTSGGTIPDRGLYTVVLPETDGGKGPRRVGELDEEMVYESRVGDIITLGTSTW QIQEITRDRVIVTPAPGRTARLPFWHGDGSGRDCGFGTAEGAFIRQVCTGLTDAAEAGHP RFDTATADRLHDDGLDDNAVENLARLLAEQRKATGVVPDDRRMVIERCPDDEGDWRVIIH SRYGRRVHEPWAMAITARLKQRYGFDGQAYAADDGIVLRLPAQEHDIDVPELIRFDPDDM QRMIETQVGETVLFAARFRECAARSLFLPRTDPGRRVPLWQQRLRAAQLLNAARLKRNYP LLLETARECLQDDYDMPALRRIMTDIQSGNIGLVDVTTDIASPFAENLLFGYVGTVMYQY DVPQAERSAQLLSIDPDVLERLLGQADFSAIMDPRAVHEVEEELGRRTFWNELPDDDIDG RVARYAKTHGPFTVERMMADLSIDAAGAVHALDMLKARGEVLDGIAAEDGGKAWLHKEVF RRIRARSLAKARAETKPVELSEYQTFLIGLQGVGPVGGERYDGEDGVMRVIEQLEGVALP PSVWESSVLPARVRDYRPAMLDGLLSSGEIVWVGSKTTGSKAKEPGLVALHPADSLLLTV QDGEKNGEAPGEPVTLPDAVMAVLAPGGAYHANQLAGLTRAAWDASSECVDESTGEILPH PWSDSQFEEALWSLVWQGKVTNSSFDPLRSLGASSHAVKAPARASRRRVRVRVSVPANMT GLWSAVPHADMQEASAERVAIARIEALLDRYGVIAPPMIDKERLDGGFSGLYPVLRRMEE HGALMRGMFVSGCGAAQFASRQTVDALRACAAEPSAVVLDATDPANLYGSVIAWPRTIGG FSIRPARRSGASVVLRGGRLLAYAVPRSHHLLLAQDADPALQQACNELAYALQRNLRDGG IRGGVTFCDANDEPLTARGEWSRMLHVAGFVPVPQGMRLYC >gi|197324945|gb|DS990229.1| GENE 1322 1381190 - 1381393 235 67 aa, chain - ## HITS:1 COG:BS_yozG KEGG:ns NR:ns ## COG: BS_yozG COG3655 # Protein_GI_number: 16078934 # Func_class: K Transcription # Function: Predicted transcriptional regulator # Organism: Bacillus subtilis # 32 64 33 65 84 59 72.0 2e-09 MLRWGLRAWSLLGAAGLLLLAAFVLLMLVMRSLLKNGRAKAIRFSTLDGICEALECQPGD VMEWVEE >gi|197324945|gb|DS990229.1| GENE 1323 1382055 - 1383494 1777 479 aa, chain + ## HITS:1 COG:Cj0087 KEGG:ns NR:ns ## COG: Cj0087 COG1027 # Protein_GI_number: 15791475 # Func_class: E Amino acid transport and metabolism # Function: Aspartate ammonia-lyase # Organism: Campylobacter jejuni # 11 464 3 456 468 416 47.0 1e-116 MVGNDTIHTVTRKEHDCIGYMDVPKDVYWGIHTQRALGNFTVSRIADSTHPQLMRAYATV KRACAEANDELGLIDHDKARLIVAACHDVENGELADQFPVDVLQGGAGTSTNMNMNEVIA NRALELGGHPKGDYGFIHPNDDVNHSQSTNDTYPAACKLALIDAIGPLAEETKKLTRAFH DLADKHTNDVTIGRTQLQDAVPMTYGQEFHAFASFLKSDLLALEHVVPQLTTLNLGATAI GTGICADLRFRTTATRHLAAITGLPITAAADPVAAMTDMSGYIATSQTVKNLAIHLKKAA DDLRLLNSGPHTGFDDLNVPARQAGSSIMPGKVNPVIPECVNQCCFMVFGMDTTVTWAAS EGQLQLNAFDPVIIHELLNGIELLTRAMAMFRERCVSGITINASTGRRYAEYSPSIAAAL NGAIGYEHAADIAQEAANDNRTVRDVAGERTDLPASTLDELLDPIALSRRLGQTCREHQ >gi|197324945|gb|DS990229.1| GENE 1324 1383575 - 1385887 2995 770 aa, chain - ## HITS:1 COG:MT0005 KEGG:ns NR:ns ## COG: MT0005 COG0187 # Protein_GI_number: 15839377 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis CDC1551 # 3 762 20 680 686 491 40.0 1e-138 MPKQEYGADSLTVLEGLDAVRKRPGMYIGTTDSQGLMHCLWEIIDNAVDEALAGACDHIT VTLHDDGSVEVADNGRGIPVDVEPKTKLTGVEVVLTKLHAGAKFGNASYNAAGGLHGVGS SVVNALSSRLDVEVDRDGKTHHMAFHQGHPGVYSDTDPEHPSPDAPFKRTRKNRPTELEI IGKVSPKTTGTRIRYWADPEIFNDTAEFSYEQLIDRVRQTSFLVPGLRITVIDENVPETG DDSVDEMMEVDAAQTPADDGTGLMDAADIVSAADTAVEDTVEAGEAEARSAAVSAAVETA KVDAARHTHARVEEFRHTGGVKDFVDFLSAGEAVSDIWRITGEDTYEEETQAVGEGGELH AQKVTRKCGVDIAMRWTNGYDTTMRSFVNVVETPGGGMHVDGFLMGLTKQIRKAVEDNAR KLKVNLKDSNMRVERDDILAGLVAVVTVRIAEPQFQGQTKDVLGTAPVKPIVTRMTDKQF GEMITGSKRGYKEQSGRVLEKIVGEMHARIQARKTKEVTRRKNALESAAMPSKLSDCQPG NDDVAELFIVEGDSALGTAKAARNSGFQALLPIRGKILNVQKASLSQMLNNKECAAIIQV VGAGSGAGFDIEQSRYHKVIMMTDADVDGAHIRILLLTLFYRYMRPLIEHGYVYAAVPPL HRIALAGSHKGEFIYTYSDDELAGRLADLERRHISYNPDIQRYKGLGEMDADQLADTTMD PRTRMLRRIRMEDAAQASEIFSLLMGDDVPPRKAFIVDNADDFDRSKIDT >gi|197324945|gb|DS990229.1| GENE 1325 1386019 - 1387521 2027 500 aa, chain - ## HITS:1 COG:ML1022 KEGG:ns NR:ns ## COG: ML1022 COG0568 # Protein_GI_number: 15827492 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) # Organism: Mycobacterium leprae # 5 499 57 574 574 414 52.0 1e-115 MATTVPDDTDAKTKSEKKGTAARTASTADKKTAAGRKSAAGKKTSSRSAASKSTARKSSA KAAAPAKPTRKRAASKSAKAVKDETEEMAKTEELANEDSSDDLDDVQVDEDGLESLDDDL DDVDDGGLDGDDDDIDDESGEDDDVPEDEEDDEGTEPGRKEPEQPKEKGAFVVRDDDDDE NLTPSGNPKRRVIAAGATADPVKDYLKQIGRVSLLNAEQEVDLSERIEAGLYAQHLLDTE SDGMDFKRKRELKWAANDGKKAKDHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLI RAVEKFDWKKGFKFSTYATWWIRQAITRAMADQARTIRVPVHMVEVINKLSRVQRQMLQD LGREPTPDELARELDMPVEKVQEVQKYGREPISLHTPLGEDGDSEFGDLIEDTDAIAPSD AVAFSLLQEQFKQVLETLSPREAGVIKMRYGLEDGQPKTLDDIGRVYGVTRERIRQIESK TMSKLRHPSRSQTLRDFLDQ >gi|197324945|gb|DS990229.1| GENE 1326 1387696 - 1388367 591 223 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1217 NR:ns ## KEGG: BBIF_1217 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 223 1 223 223 406 99.0 1e-112 MGQETNTQAVRYAEAVADDDMLREDDLRRMRDEYCERRKLSGTVAADAQWADEPFDHWLA GLSAQPRAIDDASIAALVVGMTVTLSIRDALIMSLVAGDTCADKRTMMDFASRSHAPDVQ SRMCRELQGAFFDERRRPDEPRCRAGTDMLVAMADRVPESFSVQPLAVLAYVMWWMGDSR AVAFALRCLMLDEDCSLAAIVCSAYQRGVMPAWMGAGPHHDAA >gi|197324945|gb|DS990229.1| GENE 1327 1388197 - 1388541 93 114 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MVERLIGPLRVRRHGAAELAALAVFIAHASEIVLAQHVIVRDRLRIPDGLRVRLLSHIVV PLTGLIHRRRTMPATAAPATGYHQLCRIGPVFRAKSNLCGRRLVRLANPQFLYS >gi|197324945|gb|DS990229.1| GENE 1328 1388565 - 1389662 1103 365 aa, chain + ## HITS:1 COG:Cgl2124 KEGG:ns NR:ns ## COG: Cgl2124 COG0142 # Protein_GI_number: 19553374 # Func_class: H Coenzyme transport and metabolism # Function: Geranylgeranyl pyrophosphate synthase # Organism: Corynebacterium glutamicum # 51 358 54 360 366 129 35.0 1e-29 MTVSSDLALIESRIADAVDRFMALDADDTIEGPCLTISREVARQALVSSEGGKRLRALLA LHAFDATDPQGHDDDDAHARRRDAVLDLACAIEVFQTAALVHDDIIDDSDLRRGKPAAHK ALGTTSHSASLGRGLGIMLGDLLATASVDIAHAAAQRMPRPDMIVSTFLRMHREVEIGQV LDLAVELSPLDEPERLARESMNVFRWKTASYTTIAPLEFALLASGRDPRRAHADAMAIGL PLGQAFQLADDLLDVIGSSRSTGKPVGGDIREGKRTVLLADAISGADQRQRRTLIDMFSS QSRGDDDVRRCIELFEGTGAIDRSRRRIRALWQGTLHAIGDLRLPPQDERTLTEACMRFI PIIKA >gi|197324945|gb|DS990229.1| GENE 1329 1389727 - 1391868 2822 713 aa, chain + ## HITS:1 COG:ML0897 KEGG:ns NR:ns ## COG: ML0897 COG0515 # Protein_GI_number: 15827418 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Mycobacterium leprae # 15 320 1 311 400 208 38.0 2e-53 MSEVAATSQEPQGRMIEGRYRVIRKIAEGGMATVYEAEDTRLERRVAIKIMHMQLAQGAH REQFVERFHREAKSAAAIANPHIVQVYDTGEFNGLDYLVMEYVHGVNLRHDMNLQGTFSV REMLRVISETLDGLAAAHRVGVVHRDIKPENILINDRGHVQITDFGLAKAASQATLSTTG MLLGTAAYLAPEMIEDNKATMQGDLYSVGIMAWEMLAGDVPFTSDNPVTMVFKHVHEDVP SLTSTCPGINQQVADFVSHLTARAVEARPADASDALHELQQLTANLPMDAWQYRKPADVG TGGDTEEPTAPALVGAIPAPPAPPLFDSRTGTAPQTGTAPATARTSVMPEGTAPQDVSAT QVITPQDPALTIGLMDARPLDDQGSEPAKRKRSKKPLIITLVVVLVVALVAGAGGSWWYF LGPGSYWTLPQPTDISCKENIECSIVGAKWSDYQSTLNVANIPFTSSEAYSDTVAKGNII SADPQNVGTHISKRHNGRITVTVSLGVKQATIPSDIADPTSADGKDPIKALENAGFTNIK RDDSSAEYSMTLPEGALQSISETPGSTLDHNAEITVVLSKGLMPVTMPDIVGKTKDEAMT ALDNAKLKTTVSEEYSDSVKSGSVISASPDSGTELHWGDSVKLTVSKGPETADVPNLVGK SKSDAIKTLESLGFEVKTGGLNILGLVQQQSATGKTRLRDTNGNKTVITLTVV >gi|197324945|gb|DS990229.1| GENE 1330 1391966 - 1392682 790 238 aa, chain - ## HITS:1 COG:ML0892 KEGG:ns NR:ns ## COG: ML0892 COG0204 # Protein_GI_number: 15827414 # Func_class: I Lipid transport and metabolism # Function: 1-acyl-sn-glycerol-3-phosphate acyltransferase # Organism: Mycobacterium leprae # 1 221 1 222 244 182 43.0 5e-46 MLYWFFVKGFGWIARRRMGPTAIGLENVPREGGAIIAANHLAVIDDALIPITCPRMVHFM GKAEYFEGKGIKGRFKKWWFTSVGVFPVDRSGGSKSLGALAHAREILEEGHLFGIHVEGT RSPDGRLYRGHTGAARLALETGCPLVPTALVGTREIQHPGQVIPSKGKTKVIYGKPIPVD RKDADEITHEEVRALTDHLVSEIRKLSGQEYVDEYAQKVKAELKARQEAEAATAGEGR >gi|197324945|gb|DS990229.1| GENE 1331 1392731 - 1393330 673 199 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1264 NR:ns ## KEGG: BBPR_1264 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 199 1 199 199 374 99.0 1e-102 MTDHHDSNHNDTNAGEEHPNTTPRAGHDGHDTGSNAGDDLDWAAFAAEHANDLQDVERSR NARRFEKHAQRKEKEALLSVDDLDAGTFTDDKVPLHQRGPRDHGGRSWLDTDDVMDEYGD DFVPPNPKIGRVNASKLVFWILLVAGVAGIIASVFVPALATFLGSIFGLCALVGGAGLIL QHKGHTETRTDMFDDGARV >gi|197324945|gb|DS990229.1| GENE 1332 1393369 - 1394415 1432 348 aa, chain - ## HITS:1 COG:ML0883 KEGG:ns NR:ns ## COG: ML0883 COG0547 # Protein_GI_number: 15827406 # Func_class: E Amino acid transport and metabolism # Function: Anthranilate phosphoribosyltransferase # Organism: Mycobacterium leprae # 4 345 18 364 366 226 43.0 7e-59 MAEITWKSILTKLVGGDHLSAEESEWFVDDLMQGNADPAAVGAAFAMQEQLGLTADEVCG AAKAMVSHAVPLNVSGETTDIVGTGGDGFATVNLSTMGSVAAAAAGVKIVKHGNRAASSK CGAADVLEDLGLPMDLKPEAVGEIGDEVGITFAFARTFHPAMRFVGPIRAALGIPCVFNI LGPLTNPANPAYVAIGCANRKLSPIMAAVYASRGQSGLVYTSHEGLDELAPTGPISVWEI RDGKVTETDFDPTVDLGLAKISVEQLKGGEPDVNAAAFTDFLAGKDIPSRTTALLNAASA IVADGNLVGDGTLAERFREAYALAENTVDSGKAAALFGKWIETAKSKA >gi|197324945|gb|DS990229.1| GENE 1333 1394577 - 1395080 -410 167 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAPLDVRGATCVFGGRGRACPRVEPVDYSRGRGIEVRRASFAVQRTILMDSRVLYSDTAG QRVHQSVDACVVPRRKSRNRWNSAVCKMPLSGVPDIVSGQRAHQSIYACVVRHIRCPSVQ RPGTRAAISLTLQRFRSIARQSLGILHNVSVGTPVAASWRCPPRCLP >gi|197324945|gb|DS990229.1| GENE 1334 1395108 - 1397990 4005 960 aa, chain - ## HITS:1 COG:ML0779 KEGG:ns NR:ns ## COG: ML0779 COG0653 # Protein_GI_number: 15827340 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit SecA (ATPase, RNA helicase) # Organism: Mycobacterium leprae # 4 900 1 913 940 979 58.0 0 MVDIVDKALRMGEGHQLKKLENVAKAVNALEDEISALSDEELKGQTAKFKQRLDNGENLD KLMPEAFATVREVSKRTLGQRHFDVQLMGGAALHWGNIAEMKTGEGKTLVATLPSYLNAL EGKGVHVVTVNDYLASYQSELMGRIYRFLGMNVGCIITDQKPAERRKQYNADITYGTNNE FGFDYLRDNMAWEKADLVQRGHHYAIVDEVDSILIDEARTPLIISGPAEGDVTRWYRQFA RLVPKLTRDEDYEVDEKKKVVGVLDPGITKVEDFLGIDNLYEPSNTALIGYLNNAIKAKE LFLRDRDYVVTHGEVLIVDEHTGRILPGRRYNEGLHQALEAKENVEIKAENQTFATITLQ NYFRMYDKLAGMTGTAETEAAEFMGTYKLGVLPIPTNKPMIRKDQDDLIFRTKKEKLAAI VKDVAKRHAKGQPVLLGTASVESSEVVSSLLDVAGIDHQVLNAKQHASEAKVVAVAGRKG AVTVATNMAGRGTDIMLGGNVEFLADQKLKSEGYSPEDTPDEYEKRWPGTLAEVKEQVKD EHEEVVELGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLEDDLMRLFNTQLV ARVMAKGMPEGEPIEAKSVSKGVRTAQKTVEARNFEIRKNVLKYDDVMNKQRTVIYSERQ AVLKGEDIHGDIERFIADTIDSYIKGAQKGSSKPSDWDWDGLFKALKTVFPFELDQDAAK NAADKLKGDKAVAAVRDSLVDQAREEYAELEEKVGEEGLRQLERRVVLAVLDRKWREHLY EMDYLKDGIGLRGMGQRDPLVEYQREGYQMYNSMIEAIKEESVQLLFHVDVQQVSRSEEA GIESDDAAVDEAEEAVGAASSEVDKAEDAGEAETAEESDEKVAIAQSAKESTAGEATAPI TGPAPISHAEGKVPANKRPKNEELKTPWSDGRTFPGTSKNAQCPCGSGRKYKMCHGQNEE >gi|197324945|gb|DS990229.1| GENE 1335 1398202 - 1398867 1048 221 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23465978|ref|NP_696581.1| hypothetical protein BL1418 [Bifidobacterium longum NCC2705] # 1 219 1 218 220 408 93 1e-112 MEIVVTGRHTQVKQKFRDVVESKMNRVTAIAPDAQRAQIVLTHEGNPRQADTAKRVEITV IAGSTVVRAEASSTDEFSALDMALDKLTLRLRRTRDRRKDHRRGYINPTPVDLGAVAPPE PEEEPEPEEPNNSPEAAVASDLGPGESVEVQVGDTPIVIRRKLHIAEPMSIDEALYEMEL IGHDFFLFVNKETGRPSVVYHRHGWSYGVFEIDTPENIKNK >gi|197324945|gb|DS990229.1| GENE 1336 1398943 - 1399170 112 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTTIQSKTSIDVMLRLSASNTSSATICVARPKSITVSFKESKPHSISTATLREPVKKETY FSGRVPRRLPSVRLQ >gi|197324945|gb|DS990229.1| GENE 1337 1399055 - 1399252 139 65 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|313140546|ref|ZP_07802739.1| ## NR: gi|313140546|ref|ZP_07802739.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 65 64 128 128 92 98.0 1e-17 MKETVILFGLATQIVALLVLLALSRSITSMEVLLWMVVIEVVWSVYFVVTERWHDKLASK AMLTV >gi|197324945|gb|DS990229.1| GENE 1338 1400223 - 1400648 419 141 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1269 NR:ns ## KEGG: BBPR_1269 # Name: recX # Def: RecX-like protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 141 66 206 206 248 99.0 5e-65 MRLLDAADRPSGALRDRLIDKGYDDETVAAVVDRLIEVGLVDDESYAQSAVRYCVGRLMG YRGAVMELARKGVDRPLAERVCDEARMSGVFEDAAWELGRRSAAKTQGMDPKVRKRRFWS SGGRKGHDAETLRAVAHELFD >gi|197324945|gb|DS990229.1| GENE 1339 1400840 - 1402030 1679 396 aa, chain - ## HITS:1 COG:Cgl1910 KEGG:ns NR:ns ## COG: Cgl1910 COG0468 # Protein_GI_number: 19553160 # Func_class: L Replication, recombination and repair # Function: RecA/RadA recombinase # Organism: Corynebacterium glutamicum # 37 380 18 376 376 460 68.0 1e-129 MAQRTTSKGGAGKAASKASVREAASNGPVGDGIDPRRKAALDSALEQVEKSFGKGSAMRL GDKPEQNVEVIPTGSLALDLALGIGGLPKGRIVEIYGPESSGKTTLALHVVANAQKNGGV AAFIDAEHALDPVYARHLGVDTDSLIVSQPDNGEQALEIADMLIRSGALDVIVIDSVAAL VPKAEIEGDMGDSHVGLQARLMSQALRKMTGALAQAGTTAIFINQLREKIGVFFGNPETT TGGKALKFYASVRLDIRRIQTIKNGEEAVGNRTKVKVVKNKMAPPFKSAEFDVLYGEGIS KEGSVLDMALQCNVVKKSGSWFTYDGDQLGQGRENVRKFLKDNPQITEEIGNKVKAEFGL IEVPDQLVDGESATDGDAPETAPEDGAPAAAASPAA >gi|197324945|gb|DS990229.1| GENE 1340 1402029 - 1402433 87 134 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSISLRCHPYAPYATCINRTEHTNPGANESGQCGRRLPGIHRSAPTPPYCRKEFVGVSNR AAHYVISSCTVDNYTPIGEHLFDITRSACLVSGPASEARCDRSPNAGDRERPYGRTARSI PRAAAPPQTAPAPR >gi|197324945|gb|DS990229.1| GENE 1341 1402300 - 1402533 273 77 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1271 NR:ns ## KEGG: BBPR_1271 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 77 1 77 77 152 100.0 6e-36 MREREFWELVDEVFGHGYGRSLVQDQHLDALAGLTAAQALSAGEQPRVVWNVLCDHMDVP DPQRWGSDHNAPPMPVR >gi|197324945|gb|DS990229.1| GENE 1342 1402453 - 1402773 148 106 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLILDQAPAIPMTEHLIHQFPEFPFSHVSQSNPAPPLRMPAYQSTPHPRTRRNRPPGLKP MRTVPLMYPIRRYAYARGIRRRKSLFADRIQIIGDEPQHLRGAYTQ >gi|197324945|gb|DS990229.1| GENE 1343 1402705 - 1403217 602 170 aa, chain - ## HITS:1 COG:Cgl1917 KEGG:ns NR:ns ## COG: Cgl1917 COG1396 # Protein_GI_number: 19553167 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 95 158 25 88 107 58 56.0 7e-09 METMTRTGERMETAGIPVKQVQPGTARMRDLTPAQRRAVLFAQQQVLRARAAKKAKDERQ AELNRMRMEEDSFEPRQRAVSRGVEALPEGKDVSLREAIGHVLRDLRTRDNKTLREVSEK AGVSLGYLSEVERGQKEASSELLSSIAGSLGVSTAQMLRLVADYLDSIGE >gi|197324945|gb|DS990229.1| GENE 1344 1403278 - 1403823 210 181 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 12 172 752 898 904 85 38 7e-15 MNDADSCRCDDMAARILRFCEAHDVKIVAAESLTGGLLADAFVRVPGASRVFLGSAVTYD IRAKASILGVDRGLLEREGAVHPEVARQMAASVAGLYGQPEYADRVIGLSTTGVAGPGPD GDKPAGLVYVGVRIPAAISPDGVPSVTAHELHLTGGREEVRRGAVFSLVQIVSHFTGDMQ E >gi|197324945|gb|DS990229.1| GENE 1345 1403895 - 1404566 249 223 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229231897|ref|ZP_04356325.1| SSU ribosomal protein S12P methylthiotransferase [Cryptobacterium curtum DSM 15641] # 27 215 482 663 904 100 34 2e-19 MENDMQNDTTERSATAKKSLLDGWNAPPNLVTYSRIVLVVIFLGLYIAAGSWGENNIPMR WAAAVLFIVAASTDKVDGWMARKYNQVTELGKLMDPIADKLLTCATLIVAAVFGELGPVW LGWIIVALFLLREVGITVMRFFVIDKGGKVIAAAWPGKLKTLFQCIGLSMLLLPVWVFNP AQTAPVWMTGYYTLTYALIYIALMLCLYSGAIYLINTFGSRKD >gi|197324945|gb|DS990229.1| GENE 1346 1404693 - 1407545 3068 950 aa, chain - ## HITS:1 COG:Rv2748c KEGG:ns NR:ns ## COG: Rv2748c COG1674 # Protein_GI_number: 15609885 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: DNA segregation ATPase FtsK/SpoIIIE and related proteins # Organism: Mycobacterium tuberculosis H37Rv # 440 931 391 880 883 598 63.0 1e-170 MGDDARTPVEEPLWKRIILAVPRGFGSLVRSVAGVGEFDPVYRRDGLCFLLIVLAVFFCA SEWFRVNGIIGRVLHAFSAGVLGVMSVVLPVLLVIVAIRLMRNSGKNSDNPRVVSGWAIL LWSVCSIIDVVVAADARSFDIGLLQRAGGLLGFVLGSPLAWGLSKVFAVIVFVVVGLFSL LMITRTHVTQVPDRVRTIAAMISQRSLHPRQEPDSAAQQDQFPNEVRVGDGDETLAFAEG VPAHDGTDETESDSVGAKGGWFSRLFRRKSAEKTDDASLDRYAGDDPFSHAASRHGQAAE TSLDARGNVMPRTVSSTMGAMAGAAAGAMSGAMSGGVAAAHAADAVATMTSGMAAAHPGA ASSGTSGVPAYATDPDGAAGSARLVSSTVAGTSDPWAAMPAAGAAGAISPMSPDASSGAS AGAGENMNPNVDDPALAAPDAPYQLPDLNMLSHGQPHAVRTPANDRVIRALTSTFQQFNV DAKVVGFLRGPSVTQYEVELGAGVKVEKVTNLQRNIAYAVASSDVRILSPIPGKSAIGIE IPNDDREIVHLGDVLRSDKAMNDPNPMLAGVGKDVEGHFVTADLTKMPHLLVAGATGSGK SSFINSMLMSIIMRSTPEQVRLIMVDPKRVELSAYAGIPHLLTPIITDPKKAAQALEWVV KEMDARYDDLQFFGFRHVKDFNEAVRAGKVHAPAGSNRKVAPYPYLLVVVDEMADLMMVA KNDVESSIQRITQLARAAGVHLVLATQRPSVDVVTGLIKANIPSRLAFATSSATDSRVIL DSVGAETLIGQGDALFLPMGSMKPIRVQGSWVNESEIRKAVEFVRTQRKPHYREDIEQMA QEAEKKAVEPDEDIGDDMDVLLQAAELVVTTQFGSTSMLQRKLRVGFAKAGRLMDLLESR GVVGPSEGSKARQVLVQPQDLPAVLAFIRGETDAMQASAPAAAAQQGELA >gi|197324945|gb|DS990229.1| GENE 1347 1407828 - 1408553 690 241 aa, chain + ## HITS:1 COG:fic KEGG:ns NR:ns ## COG: fic COG2184 # Protein_GI_number: 16131240 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Protein involved in cell division # Organism: Escherichia coli K12 # 74 224 56 196 200 87 33.0 2e-17 MTPGDATMRAAAGYERGDNDVSALIDTADRETSGIVSGRLADGSLDDHATDHASSVFART VLLAERRWNPSGDIAELIAIHRGLFDGVFSDAGQLRTSNVTREVTDKRHQAKNPEAFFPA QLIETGALNISTELADKRNLDNLDRGVFVRELAHVYDELGYLHPFKGGNAMTLRIFASRL AHDAGWDLDWGGVTRESYKQAKHAAYRGDINAFSQMFADIVRPANPTRVFLIAGWEQGPA H >gi|197324945|gb|DS990229.1| GENE 1348 1408619 - 1409668 1245 349 aa, chain - ## HITS:1 COG:Cgl1899 KEGG:ns NR:ns ## COG: Cgl1899 COG0324 # Protein_GI_number: 19553149 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA delta(2)-isopentenylpyrophosphate transferase # Organism: Corynebacterium glutamicum # 28 309 5 286 301 226 46.0 4e-59 MASNVTGPASSGSEGRSANPSVAMPRVVSIVGPTASGKTGLGIAVARALAERGERAEIVN ADAYQMYRGMDIGTAKPTADEQAAVPHHLLDIIDPDEAMSVARFQQVARATIHDLQSRGI RPILVGGSGLYARAAIDDISFPGTDPDVRRRLEERERSEGAGALFDELRAKDPQAASRMD PHNPRRTIRALEVIEVTGRPYSASLPRYRYVIASVQIGLDLPREELDQRIDIRTKQMLEG GFIEEVERIRPHLGATAGRALGYQQVIDYLDGLCDLDDTFRDIAQKTKRLARKQMGWFGR DPRIHWLHALNPRLVDNAMAVIDHADAGDYDPIDAQADEYTQHHLGDLQ >gi|197324945|gb|DS990229.1| GENE 1349 1409771 - 1411210 415 479 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|229216491|ref|ZP_04342811.1| SSU ribosomal protein S12P methylthiotransferase [Desulfomicrobium baculatum DSM 4028] # 28 413 6 389 441 164 30 1e-38 MTESERTSTLTDPTLGATTGRGKGVFYVHTLGCQMNVHDSERIAGVLEDDGYIPATEEQA ADKDVDLIIMNTCAVRENAAERMYGTIGLWADLKRTHPNMQIAIGGCMAQLDRKRIAQKA PWVDAVFGTKNIGSLPRLLDQARMAGTCQVEVADKLDYFPSQLPVARASKVSSWVSISIG CNNTCTFCIVPTTRGKEHDRRPGDILAEIRRCVDEGAKEVTLLGQNVNSFGYGIGDRYAF SKLLRACGDIEGLERVRFTSPHPAAFTDDVIAAMAETPNVMHQLHMPLQSGSDKILRAMR RSYRSAKFLDILRKVREAMPDAQISTDIIVGFPGETDEDFEATMDVVRQARFQSAFTFEY SPRPGTPAAEMEQVPHEVVQERFDRLVKLQEQITEEELAKFEGRDVEVMITGAQGKKDSA THRVTGRERTGVLVHIGVPDGEPMPQIGDFVTATVTHAGRHNLIADPDVNAGQTYAVRR >gi|197324945|gb|DS990229.1| GENE 1350 1411300 - 1411527 106 75 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDGIMREPHLELRIKDLQFGAYLIHRAFVDLHEIHEFGEFFRRKRPPVHAHGIESGFQVI RVYAALSVKYHGSPS >gi|197324945|gb|DS990229.1| GENE 1351 1411432 - 1412043 965 203 aa, chain + ## HITS:1 COG:SA2297 KEGG:ns NR:ns ## COG: SA2297 COG2357 # Protein_GI_number: 15928088 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Staphylococcus aureus N315 # 2 190 43 228 230 188 46.0 6e-48 MQVYEGAMYEISTKLEILDSEFQVRFSHDPIHHMERRLKSVNSILGKLKRKTLPVTVSSI KDNLFDVAGIRVICNYRDDVYSVSNYLSAQNDISVLRVKDYIKNPKQNGYRSLHVIYAVP VFLSSGAHYTPVEVQFRTIAMDYWASLEHALRYKTDLPDAKLAEHSQTLLDCAQSLQNIE TQMQNIHRDINGAPQVEETPKAD >gi|197324945|gb|DS990229.1| GENE 1352 1412164 - 1413150 893 328 aa, chain - ## HITS:1 COG:CAC0076 KEGG:ns NR:ns ## COG: CAC0076 COG0697 # Protein_GI_number: 15893372 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Clostridium acetobutylicum # 1 310 1 287 303 191 38.0 2e-48 MKQQEMAGMACLVLTSLIWGFAFVSQVQGMASMSPLFFNATRFTLGAISLIPLLLWKRLR RCRESGKTVGAGNREAGDDEHDMIAGSALSNPLIVGMICGVFLFAASTLQQYGIMFGCSA GRAGFITALYIVMVPLLAYLVLRRAVRMMTWMAVGVAVAGFYLLCITDGFGSLTLADCLL LFTAVLFAAHILSIDTLGACVDALTLSFIQFVTTAALSWVGTLIEGSMDWNGAGQAWIAV LYAGIGSVGVAYTLQAVGQQWVPPTRASLIMSLESVFSVIGGALLLGETMTVRGYLGCAL IFAGIVLAQMPGVGRRRLAVNKTGKRDQ >gi|197324945|gb|DS990229.1| GENE 1353 1413337 - 1414170 1076 277 aa, chain - ## HITS:1 COG:YPO1163 KEGG:ns NR:ns ## COG: YPO1163 COG0670 # Protein_GI_number: 16121459 # Func_class: R General function prediction only # Function: Integral membrane protein, interacts with FtsH # Organism: Yersinia pestis # 52 276 13 235 236 124 33.0 2e-28 MTFGQQPGNGDPYYGGNQQQPAYGQQQYGQSQYSYAPNGTAAINAQTIYSREQVQAAQRA SVTRAYGEMTLGLIITAVVAVVAQMTGAYVSFIESTGLIGFFGFAIVQVVLAVALGARIM KIKASTARVMFYVYAALMGFTLSSIFLVYSISDIGVALVLCAAFFFVLTMFSLTTKFDML KAGPILMVGLVVLIISQIVLMFVPGSTTGMRIICAFGLILFAGMTLYDAQQTRALFSAYE AQGPEMIKKISIICALNLYLDFVNMFLYILQLFGSRD >gi|197324945|gb|DS990229.1| GENE 1354 1414273 - 1415091 1232 272 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1282 NR:ns ## KEGG: BBPR_1282 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 272 1 272 272 464 99.0 1e-129 MSHGIKGETSAQGTPKGTTICGIVGVVFGALGLVLSFIPIVNNIAAILGAIGVVLAIIAM VGTFRGKKAGKILSIVAAVLSVLAIVITLAMQSAASKAIDKAINGSGTSQSKSSDAKKSG DDSSNDGSANNDPTNNDSTDTTKASGEQDQEGDLKNLHVTIVSAAKSGNDYEDKPTVMVT YEWKNNSGKNNSFAALAHPQVFQNGQALDTAVYLDQPTGYDMNSYTAEIQPGATGKVTLG YVLKDESTITVDVTDLFSIDDSRKVVHTFDLK >gi|197324945|gb|DS990229.1| GENE 1355 1415257 - 1416696 1272 479 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1240 NR:ns ## KEGG: BBIF_1240 # Name: not_defined # Def: atypical histidine kinase sensor of two-component system # Organism: B.bifidum # Pathway: not_defined # 1 479 1 479 479 875 97.0 0 MNDFSPHPRAGGPLPATTSDEDTVVVRTRVWCTAVMITVSAFMCLVQTSFAATRYINNPV NAMYVWFIASSLLAFAFPFLLLARDKHPEPVFWICCAVVLIFPYDPMLMLMALTSLIARR RGRQRIIRAIIAATLVGVWGQMRDTLRPFSSSMWQSAIFIKPDSDVASGHAVMLAGRPTI IATAVVVELIAILIAILAGLYIRSRVQLDEAAAKTQAISDHAASLQRNLTDQQLVDAIAA EAHDTLAHSLSLIALNASALQGEARAFIQLADATNPHETGQTLTPELRNQASLIEEKSEE IRRQSAGALDEAHSIIGMLRHPQQARQQLAPAPQTSMTRQSLDALINDARSAGMRINTWI DIQQLSDLDEGTGKIAYRAIQEGLANARRHAEGEPVSVEVTMNPGNGIRIHISNPMKRGL SAPNEREVPSATDGNGLAGLTARVQTAGGTCRYGHDDHHVFHLDVAMPWIARQADRMKP >gi|197324945|gb|DS990229.1| GENE 1356 1416693 - 1417364 441 223 aa, chain + ## HITS:1 COG:BH2213 KEGG:ns NR:ns ## COG: BH2213 COG2197 # Protein_GI_number: 15614776 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Bacillus halodurans # 9 215 3 203 217 103 32.0 2e-22 MNDSEQHVITVSVIDDDPLVCQAMSMILRDYSQGRVSVVSTSTDGATAVRNADSEHPDVV LMDVAMPGIDGIETTRRLRALRNPPHVLILTSLNPSNTVERSVEAGAEGFVSKTDAPEDI IRRIVGICEGTPQFNPASQRQLINDLSMQRPQSRRDEARALLDTLPSREREAVLLAAEGC TNAEIAGRMFISERTAKAHLSSAADKLDMGRVQMARLVERADL >gi|197324945|gb|DS990229.1| GENE 1357 1417451 - 1419556 1762 701 aa, chain + ## HITS:1 COG:NMA2230 KEGG:ns NR:ns ## COG: NMA2230 COG1479 # Protein_GI_number: 15795099 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Neisseria meningitidis Z2491 # 22 372 27 378 571 88 25.0 5e-17 MAINATEKPLGKVFTPDYQLSIPSFQRAYIWKPENILQLISDLEEACKSPETPYFLGSLI LVREGDTSFSVIDGQQRLVSLSIIIAALRDLEHDEEWMRLLDALIVEPGDKLRGITSQPR LTLRERDAAFFREYVQEGNLEALFDMNDEDCSSNAQHNIIANTKQAYDALAQLDEEERHR FASYLVNSVTLVIVTTDDLDGAHRIFDVMNMRGLPLTPSDVFKARAMSGLPAAAVDAYAS RWDDIMDPLGDDAARVEEFFRYLHLILTHKPATGKLIEDFLSDVLNQYLAGHSIEAFIDG VLAPYAMAWRILERPSDTVLPDDVRGRLEALNDYRHHEWKAVAMWALTHSFRNLGDPEVS FFAQRGSHSARDGGRTADPLGSHDRQRLGEILCALEQVAGVDMLNRQSAIDRRGHTAAAI RDLDKGFPVRLVRGLSVSAADRAGALIRLHGELQGDPDLVRLLLVRANEQRAGARIPRPR ALAVVPIMPLDIASAASFSSWTADLHDYWMYRLGNMVLMQGKEGQIDRLTEYGRRRDRVL LRADSCRFPLTKQIADFNECTPAMLEYRQKETIRLLAEYWDIRYDESHADLTSKPPEQLS GDAGSRQTRGSQRVTIKQVVDAGLLIPGETLVWERPRKGERWLVTVTQEGRFRLEDGSEY ASPTAAARAAGGRSAGLDVWKRTSNGEKLSDIWKAYRLRTR >gi|197324945|gb|DS990229.1| GENE 1358 1419666 - 1419917 117 83 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MEDDAYTEKVPSQGMRMGLWLDKGRIKQRQQPTATVRQSDVPLGGHSVMPYSEAMTRHRS SAALSTSSLTMVTSNSFSAESST >gi|197324945|gb|DS990229.1| GENE 1359 1419800 - 1421383 1879 527 aa, chain - ## HITS:1 COG:Rv1389 KEGG:ns NR:ns ## COG: Rv1389 COG0194 # Protein_GI_number: 15608528 # Func_class: F Nucleotide transport and metabolism # Function: Guanylate kinase # Organism: Mycobacterium tuberculosis H37Rv # 325 515 7 196 208 157 46.0 4e-38 MTHASSEEEIKAMRSDFGLRLSSSMAQYGPLCVGIDPHRKNLTDWGYNVDAEGAELFSMR MLQAMRDRAAAVKFQEPMFERYGSKGFAALERVLYAARQMGIITIVDCLHGGLSTTISAI ADAYFKPGAPLLADAITLLPYYGARSLRGLTNEALNNGRGVFIASLTSNQEGASMQTAIR QSGDFKGKTVAFGIASTAQKFNDDIDGMGSVGLIIGATIGQWIADSGVDPAKFTGPILSP GYGWQGAEAKDLKTVFKGTRGNVLVTVSRFIAAHGPDISALAQATEAIAIDVRQALYEAM KEGEDKEKDGMGTITASLQQTPAEPAATPDDDGTPRKRLVVLTGPAGVGKGTVENILRKN HPGVWVSVSATTRKPRPGEVNGVNYWFLDDQQFTDKEEAGDFLETATVHGLARYGTPLKP VQEHLAEGVPTILEIDLQGARRVKQRAKELGLEVVYVFIAPPSFDELVRRLKGRGTETPE EVAKRLETAHVELSAENEFDVTIVNDDVDKAAEDLWRVIASEYGITE >gi|197324945|gb|DS990229.1| GENE 1360 1421402 - 1424782 4849 1126 aa, chain - ## HITS:1 COG:MT1428 KEGG:ns NR:ns ## COG: MT1428 COG0458 # Protein_GI_number: 15840842 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase large subunit (split gene in MJ) # Organism: Mycobacterium tuberculosis CDC1551 # 1 1114 1 1105 1115 1276 61.0 0 MPKRTDIKSVMVIGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM ADATYIEPIATPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYNVELIGASL DAIDRGEDRELFKKVVDEAGAESARSEVAHSMKEVDAVAAELGYPLVVRPSFTMGGLGSG IAHDEEELHRIAGAGLHYSPTDEVLLEEGIEGWKEFELELMRDRNDNVVVVCPIENVDPV GVHTGDSITVAPCFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAVHPDTGRIIVIEM NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIRNDITQSTPASFEPTIDYVVTKVPR FAFEKFPGADPRLTTSMKSVGEAMALGGNFQESLGKAMRSIDKRHMGFSWDGDKPDEAEV AELLKAITVPTEHRYLQIQRALWGGATERQIFDATKIDPWFVKQLALINQTAMEVRDAEK LTAKLLKKAKLAGLSDLQIAHLRNLGDEGENTIRELRWTYGLRPVYKTVDTCAAEFDAVT PYYYSCYADETELRKRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN PETVSTDYDMSNRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG VPILGTTPESIDLAENRELFGEVLRREHMNAPRYGTALSLEEAREAAHNIGYPVLVRPSY VLGGRGMEIVYDDAQLTKYVNRALDEAKADTVVSGRLPSPLLIDKFLQDAIEIDVDALFD GEELYIGGIMEHIEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAISKGCGVKGLINVQ YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIADQRANGLLLPKGDG GDIHRGQQVAIKESVLPFKRFRTPVGKTVDILLGPEMRSTGEVMGFDRDFPHAFAKSQLA AYDGGLPTSGNVFISVNDTDKRQLPLMAVRLVELGFSIWATEGTASVLRRYGIDSKIVDK ISTRVDSDPDAAVKVEHAVGGIGKNVVELIEEGKIDMILNTPNSRGSRSDGYSIRAAAIA ADLPQFTTMTEFSAVLMAIEAVKHNDYQIMSIQEHAKQLFELESQE >gi|197324945|gb|DS990229.1| GENE 1361 1424775 - 1425992 1504 405 aa, chain - ## HITS:1 COG:Rv1383 KEGG:ns NR:ns ## COG: Rv1383 COG0505 # Protein_GI_number: 15608523 # Func_class: E Amino acid transport and metabolism; F Nucleotide transport and metabolism # Function: Carbamoylphosphate synthase small subunit # Organism: Mycobacterium tuberculosis H37Rv # 16 395 4 371 376 429 60.0 1e-120 MNQIDSETVSFAPDDAVLVLEDGQVYVGDSYGAIGKTTGEIVFATGMTGYQETLTDPSYD RQIVVQTFPHIGDTGINREDPESSRIWVAGYVVRDPSPTVSNWRATGSLDDDLVAEHIVG ISHIDTRKLVRHLRSAGVMRAGIFSGDALLDDEGRLKTVAALIDEVKATPQMKGLSLYDE VSTKETYTVGPCGEYEGKEPLYTVAAVDLGVKGMTPHRMAERGCRVHVVPSTITFEELTA LNPDGVFFSNGPGDPEQADPEVELLRKVLDAGYPFFGICFGNQLLGRALGFGTYKLKFGH RGINQPVKDLTTGKVEVTAHNHGFAVDAPIGETVGAPFDNGHFGKVFVSHIDLNDDVVEG LQCVDIPAFSVQYHPEAAAGPHDAAYLFDRFVDLMKTSKEENRNA >gi|197324945|gb|DS990229.1| GENE 1362 1426080 - 1426751 662 223 aa, chain - ## HITS:1 COG:ML0523 KEGG:ns NR:ns ## COG: ML0523 COG0781 # Protein_GI_number: 15827185 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 2 128 7 136 190 98 40.0 1e-20 MARSTARKRALNTLYEADEKGQDFLSLLAERIEEPGAQTPLPDYAIEIVRGVADHRREID YMLNEHSTGWKVRRMAVVDRNILRIAAWEIIFNDDVPDRVAIDEALGLAKTLSDGDSPAF IHGLLSAICDDTEGREAILHPENDEPDAQPSDDGQEPGEPAGEASHAEAETGDSEASEDD DIADGVDFDDMTFDDVSDDVAEAASEQTSDPQAGQQDGESTSK >gi|197324945|gb|DS990229.1| GENE 1363 1426773 - 1427336 922 187 aa, chain - ## HITS:1 COG:MT2609 KEGG:ns NR:ns ## COG: MT2609 COG0231 # Protein_GI_number: 15842068 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) # Organism: Mycobacterium tuberculosis CDC1551 # 4 187 3 186 187 253 66.0 2e-67 MAQTTNDIKNGSVLNLDGQLWTVTKFQHVKPGKGPAFVRTTIKNVLSGKIVDKTFNAGMK MEFETVDNRNLQYSYEDGDNFVFMDMTTYDQVYIPKTLVGDQAKFLLEGTDCVVSFHDGT PLSVELPASVILTITHTEPGLQGNRSNAGTKPATVETGAEIQVPLFVGEGEKVKVDTRDG SYLGREN >gi|197324945|gb|DS990229.1| GENE 1364 1427314 - 1427499 180 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSLVVCATVTHLFMFSISAKLKNSLVYYAIPSIQRVAAEQSPNGIFRLHQLFLMQLKRNK Q >gi|197324945|gb|DS990229.1| GENE 1365 1427609 - 1427809 282 66 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1248 NR:ns ## KEGG: BBIF_1248 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 62 1 62 65 111 98.0 9e-24 MDTEVETLPSKSTRQEGYVEAKHCLCIELLPDVNECATRIFAPQVRVSDHMLDSVLCINT INRLIT >gi|197324945|gb|DS990229.1| GENE 1366 1428524 - 1429666 680 380 aa, chain + ## HITS:1 COG:SMc03237 KEGG:ns NR:ns ## COG: SMc03237 COG0477 # Protein_GI_number: 15966838 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Sinorhizobium meliloti # 18 360 72 392 415 68 23.0 2e-11 MVGTVFALCEGLGTLPGGHLSDRIDRKKLMIVCGLISAATLCVMTLALVAKMMSAPLLFL FAIVRGLTSGVFSNVSNIILPQIVTGNQLVQAYSANESRDACIQLFSKPLSGFLYGLGPE IPFLISAVLYALMSVATPLIRSDLRPKNDASPSDSDDSTKKTPRNHIGGSSSHSSLIEGF AWYTRWPQAVSVFSSVLLLNCVLTLMVSIVILNQQMLNIPGWQIGLISTGSGVGLLSGSF LTTPLANRLTGGRTVQVSFIIIMVGCALQPLTQNTYLLAGCMAIMNLMVVPANSVLGAYA SLIIPNDLRGRVFSVFSLFNITLASLASGIAGIMLSSLGYMIAAATTAAIMTGTVLLAFM SNGIREIPDKAAFSNLEPWR >gi|197324945|gb|DS990229.1| GENE 1367 1429667 - 1430788 1053 373 aa, chain - ## HITS:1 COG:all3208 KEGG:ns NR:ns ## COG: all3208 COG4222 # Protein_GI_number: 17230700 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 23 309 108 383 394 69 24.0 1e-11 MDNHGTDVARLWLLGNDLDKAAPTGSIVLTDENGTPYNGETTDDEGLGVLPNGDFLLTSE GHPNAAEGEHEQPKIRIFGIDGRQKDELPVPELFDINCRGQAVHNKSLEALTVSPSGHQI VVGNEYALKNDSPSGKDIATTARRALVYRDDVKGAKGQWKLVKQVAFKAADVNMGITEFA AIGEDGFLVLERSWDQTHGYGIKLAYAHGIAAAPDVSDVASLSKSADSSFLPVTELADFG GKLTLGAQFKPNAQYMDANPLLDNFEDLVITHADDNGRLDLSLLTDNNFDTTETTRIVNV QIDRSAFVADPSNGDGQQHGATIQRPSGAGLGGSTVRLAHTGAAVTAVFMLAAVTLTSGL VLIAGRRLRISRE >gi|197324945|gb|DS990229.1| GENE 1368 1430901 - 1432157 1073 418 aa, chain - ## HITS:1 COG:alr4238_1 KEGG:ns NR:ns ## COG: alr4238_1 COG4222 # Protein_GI_number: 17231730 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Nostoc sp. PCC 7120 # 55 388 423 758 760 73 27.0 5e-13 MNKRIAAVTATACMLFASVMIPAVSAEGTTDIGAQNQVKAVAYSDALDKLDYKGIRVGGL SGLTWDKTADSYVAQSDNHGSDESRVWFLGKDLHNPSITRDPVTFTDVNGTPYNGNTTDN EGIAVLPDGDFAISSEGIPPAGRNQAEHPTIRIFDANGRQKGELEVPQLFDINTPKGQAS HNLTLEGLSLSPTGHELVSAMEGTLKSDVYQNRSDARRFLVYRDDVTGKAGQWTLVKQVG FHTVPGLDISDIVLDSEDSLYVLQRSWNSETGNKVALSYVSGLNGAPDVSGVANLNDPKN ASEFVKSRQIGELDKLSDLGASAKPGAHQANPLMDNYEGLVITNLDQLATPDASWHRGDG EYKAAISIISDDNYSATQTTRILDVEAEPFQKTGGRIRRLGKRSPVTVRHGTRQKRSP >gi|197324945|gb|DS990229.1| GENE 1369 1432154 - 1432270 70 38 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPSFHVWFICRRVIIPLPDTLQSQHGHVNGNVRKGKP >gi|197324945|gb|DS990229.1| GENE 1370 1432403 - 1433602 1278 399 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|119502908|ref|ZP_01624993.1| Ribosomal protein S19 [marine gamma proteobacterium HTCC2080] # 1 398 1 406 407 496 62 1e-138 MAKEKYERTKPHVNIGTIGHVDHGKTTLTAAISKVLHEEYPDLNPEYDFNQIDAAPEEQQ RGITINIAHIEYQTAKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTRE HVLLARQVGVPRILVALNKCDMVEDEELIELVEEEVRDLLDENGFDRDCPVIRTSAYGAL HDDAPDHDKWVQTVKDLMDAVDEYIPTPVHDLDKPFLMPIEDVFTISGRGTVVTGRVERG QLAVNTPVEIVGIRPTQTTTVTSIETFHKTMDACEAGDNTGLLLRGINRTDVERGQVVAK PGSVTPHTKFEGEVYVLTKDEGGRHSPFFSNYRPQFYFRTTDVTGVIELPEGVEMVQPGD HATFTVELIQPIAMEEGLTFAVREGGRTVGSGRVTKILA >gi|197324945|gb|DS990229.1| GENE 1371 1433776 - 1435905 2992 709 aa, chain - ## HITS:1 COG:ML1878 KEGG:ns NR:ns ## COG: ML1878 COG0480 # Protein_GI_number: 15828005 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation elongation factors (GTPases) # Organism: Mycobacterium leprae # 4 709 5 701 701 955 67.0 0 MALDVLTDLRMIRNIGIMAHIDAGKTTTTERILFYTGKNYKIGETHDGASTMDFMAQEQE RGITIQSAATTCFWNRQSHDTKEKFQINIIDTPGHVDFTAEVERSLRVLDGAVAVFDGKE GVEPQSETVWRQADKYGVPRICFINKMDKLGADFYFSVQTIKDKLGAKPLVVQLPIGAEN DFAGVVDLIRMKAYVWNDVSTDQGAHYDTVDIPADLQDKAEEYRAQLLDDVAEASDELTE KYLESGELTEDEIRAGIRKLTIERKAYPVLCGSAFKDKGVQPMLDAVIDFLPSPKDVPSI KGFKPGDESVEIDRKPLTSDPFAALVFKISTHPFYGKLVFVRVYSGAVKPGDNVLDSTKG KKERIGKIFQMHADKENPVDAAEAGNIYTFVGLKNVSTGDTLCDEKAPISLESMTFPDPV IQVAVEPKTKADQEKMGIALAKLSDEDPTFQVTTDEESGQTLIAGMGELQLDIIVDRMRR EFKVECNVGKPQVAYRETIRKPVLNEVYTHKKQTGGSGQFAKVFMNFEPLDTEAGETFEF ENKVTGGHISAEFIGPIEAGVKEAMESGVLAGFPVVGVKATVYDGQMHPVDSSEMAFKIA GSMAFKEAAPKAKPVILEPIMAVEVRTPEEYMGDVIGDLNQRRGNIQSMTDATGVKVIDA KVPLSEMFGYIGDLRSKTQGRAMFTMQMDSYAEVPKSVSDEIIKAQRGE >gi|197324945|gb|DS990229.1| GENE 1372 1435933 - 1436403 785 156 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224283422|ref|ZP_03646744.1| 30S ribosomal protein S7 [Bifidobacterium bifidum NCIMB 41171] # 1 156 1 156 156 306 100 1e-81 MSRKGPAKKHQLLPDPIYGSTVVAQLINKILLDGKKSIAEDIVYSALDMVKEKTDQEPVA VLKRALDNIRPSLEVRSRRVGGATYQVPVEVKPARANTLSLRWLTDFSRARREKTMAERL ANEILDASNGLGASVKRREDTHKMAEANKAFAHYRW >gi|197324945|gb|DS990229.1| GENE 1373 1436409 - 1436780 622 123 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|23465669|ref|NP_696272.1| 30S ribosomal protein S12 [Bifidobacterium longum NCC2705] # 1 123 1 123 123 244 99 1e-62 MPTIEQLVRKGRQAKPKKSKTLALKGSPLRRGVCTRVYTTTPKKPNSALRKVARVRLSSG IEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTQGVKDRKQGRSLYGAK KAK >gi|197324945|gb|DS990229.1| GENE 1374 1437646 - 1437942 63 98 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MYRAWVMYGRVTQAAFRRPRTINKGAGCGSASGALAKGVSSIMKGVVTLQQSRHCAASSS TAAVAALPALRILCLFAVVLFPSAAHNYRGYLRLSCSA >gi|197324945|gb|DS990229.1| GENE 1375 1437997 - 1439022 1431 341 aa, chain + ## HITS:1 COG:SA1154 KEGG:ns NR:ns ## COG: SA1154 COG2008 # Protein_GI_number: 15926897 # Func_class: E Amino acid transport and metabolism # Function: Threonine aldolase # Organism: Staphylococcus aureus N315 # 1 341 1 341 341 379 51.0 1e-105 MLSFGNDYSYGACPEILDRLARTNDTAFPGYGSDAACEDAKRRIREACETPDADVWFLVG GTQTNQIVIDTMLAPYEGVVTVDSGHPNVHEAGAIESTGHKVITLPHHAGKLDAAELDDY CATFYADDNHEHMVFPGLVYISHPTEYGTIYGKAELEAIAETAHRHSMPLFVDGARLGYG LTAAGTDVTLPDLARIADVFYIGGTKVGALFGEAVVFTKGNTPKHFLTQIKQHGALLAKG WLLGLQFGTLFTDDLYLRIAANANRQADRIREALRERGYTLTFEAPTNQVFVTLGHPTIE RLQAHVRMGFMEKADNEHTVMRLCTSWATTDEQVDQLIALL >gi|197324945|gb|DS990229.1| GENE 1376 1439047 - 1440237 1320 396 aa, chain - ## HITS:1 COG:HP0421 KEGG:ns NR:ns ## COG: HP0421 COG0438 # Protein_GI_number: 15645049 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferase # Organism: Helicobacter pylori 26695 # 21 395 1 379 389 255 36.0 1e-67 MRDNKNEEPRPQDRSVLDRPMTIVLVMDTIGNKGNGTSNSALQYAHELERQGHHVRLVGI GAPEYPARVNKVPLVSWVAAKQQMQFAKPSDTLFRTAFAGADVVHLYLPFKFGRCAYKVA RSMGIPVTAGFHLQPENVMYSAGPLKYLPGMSGFLYALFRFWLYRRIGHIHAPTEMIAGQ LRAHGYKAKLHVISNGYVPRFTPKRQRSDGAPAPVPFRIVASGRLSHEKDQITLIKAISR CRHAKDIELIICGTGPLQHYLRFRADRLLERKAQIGFHKNAEMPALLRSCDLFVHPSIVD IESLSVIEGMASGLVPVIASAELSAAGQFALLDESLFPARDVAMLARRIDWWIDHPHELA VWGGRYAEHAKADYSVEASVAKFVAMEREAIADAKA >gi|197324945|gb|DS990229.1| GENE 1377 1440575 - 1444417 4650 1280 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1300 NR:ns ## KEGG: BBPR_1300 # Name: not_defined # Def: glycosyl hydrolase family protein (EC:3.2.1.22) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 5 1280 29 1304 1304 2172 98.0 0 MCLAPLFSTNTAQAAGGDVISVADYGAAADSGEDSAPAIIKAVDKAKELAAEGKNVTIAF PKGRYDIYPDKAERRTLYVSNTVGTNSSYKDKKIGILLEDTKNITVDGQGSDFVFHGKMT TFAAINSRNVTFKNFSVDFQVPTVIDLTVEKVDAGAKTATVYVPEEYNYRLSGSNIEWYS DSSPYTGATYWTASNALPYVQLYDTKTGLTVRGDVWTNPIFQNVTGITDAGNHRLVFSYS SMSDKLANATGISYQMRQTTRDHPGVFLWKDKDVTLKGIDFRFLHGFGVVGQSTDTITMD GLNFGTGEGTGRSTAGYADFVQMSGCKGIITVVNSSFSNPHDDPINVHGTFLQVVEKISD TKIKVRYMHNETAGFPSFFVGDQVEFMTKGDMLPVSDSVRTVTAVDGPDGQGGDMGAGSG SLTDIVLTLDSAIPSAVAVNSHVVENITYTPEVNIHDNVFKETPTRGILVTTRKKVTIEN NLFDGMGMAGIYISNDAQSWYESGPTRDVTIRGNTFRRSGSDAILVEPTNPTVSTTDTVH KNMTIEGNTFYVNGNRVLNAKSVSDLTFRDNKIYRENPDDTVTLGGDADVALAVGDTRRI DATASVSQVSGSRLFRLNGCKQVVFGGNTYDVGVKAGIDLANMGASEVNVSDDSAKVGAD GLVPVTGSIAYVSDDAAVASVDQDGTITAVGEGETTVRTYVIAGTRRMPGSVVNVRVSAS TATAPTPGTSADPLDGHPSSVSTLSSATIDGLSKSFDFKPGTLYYFGADSALTARAAFKA TDADASVKATLNGKAIDATGADVKLARGRNVIEATVTATDGITANTYRFVIDRIGGVDTG LAALSVGGNAISVEHGRLQYTASTMRSKTQVVASSFDPTATLQLMRVNGSKRVPVGDAQQ GSLTRDVTVYQGDNTFELDVTSGGSTVSYKVAVTGTDSVYASDLAWESATSGDPNTNPVR KDKSCGNNTITLWDGEKEQTFDKGIGTHAASRIVYDVSDLGAIRFEAYVGVDRELTGVDR DHANVDFQVMIDGEVVFEKTAMQHDTPMAKVSVDIPEGAKTITLAVGAGSETWGDHADWA DARFVGVEMPEVPQVTGLAVTGEGVKDGKLDMTVGQSVGLGVTVTPEDAVDQSVTWTVAG DAVSVGEDGTVKALKAGTATVTVASVAVPSVTASVTVTVAEKADPDPDPKPDPEPDPDPT PKPDPDPDPNPNPGPGDEPGTTTPGDGQKPNTDKDADKNAGKDKNQSIAATGASIVPVGV LAVSMMAAGCALTGRKRRES >gi|197324945|gb|DS990229.1| GENE 1378 1444703 - 1445983 1396 426 aa, chain + ## HITS:1 COG:PM1053 KEGG:ns NR:ns ## COG: PM1053 COG0027 # Protein_GI_number: 15602918 # Func_class: F Nucleotide transport and metabolism # Function: Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) # Organism: Pasteurella multocida # 17 425 4 393 393 344 50.0 1e-94 MTETSAFASSLPSHRPLGTPLGAHPTRVLFLGSGELGKEITIELMRLGAWVCAADSYAGA PAQQVANEARVLDMADAARLRALFDEVRPDIIVPEVEAIATGELSDAAARGVQVVPSAEI AAICMDRERLRVLAHEDLGLPTTPYRFAGSLEELRAGAREVGYPCVVKPVMSSSGHGQSV VRGADAIDAAWVEAQEGRRAADEGDVSRVIVEALAPLDYELTVLTVSSSAGVVTCAPIGQ RQESGDYRESWQPAAADGEVLERARAIACTAVQGLVDKATASGETGWGVFGVELFVLTDG SILFNEVSPRPHDTGMVTLISQRLSEFALHARAILGLPVTEGHVALAMGDGQTAASHAIV VAGDGEAEFTGVENALAEPGTDLRIFAKPRVHGHRRMAVSLAIGTDAGDARRKAADVADA LTITVR >gi|197324945|gb|DS990229.1| GENE 1379 1446301 - 1447053 1245 250 aa, chain + ## HITS:1 COG:BH0626 KEGG:ns NR:ns ## COG: BH0626 COG0152 # Protein_GI_number: 15613189 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase # Organism: Bacillus halodurans # 1 241 1 237 237 242 51.0 5e-64 MEKLEKLYEGKAKQLYATDDPEVLWVEYKNTATAGDGEKKEDFTGKGRLNNLITTIIFDL LKKRGIDSHLIKRVNATGQLVRKVNMFPLEIVLRNVAAGHFCSRLGVEEGLPLKEPVLEY FIKNDDLHDPFVNDDDLVALGVCTRQDLAEIAPLARKINEALIEIFAKIDVKLVDFKIEM GRASDGTLLLADEITPDSCRLWDQKDHSGKVEHLDKDLFRRGLGSIIPAYEEIEERLAEL AKSEGIEVTE >gi|197324945|gb|DS990229.1| GENE 1380 1447055 - 1447153 73 32 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAVNALTSPQSSIGDSSPPEGSQHYVLLLALG >gi|197324945|gb|DS990229.1| GENE 1381 1447261 - 1451007 5583 1248 aa, chain + ## HITS:1 COG:CAC1655_1 KEGG:ns NR:ns ## COG: CAC1655_1 COG0046 # Protein_GI_number: 15894932 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain # Organism: Clostridium acetobutylicum # 2 972 5 976 985 964 52.0 0 MVFRVYVEKKPGFDVEAQQLGTELKTILGIDGLRKVRIVNRYDVEGISQELFEQATPTVF SEPQVDDASANLPDFGDATVFATEFLPGQFDQRADSAAECIQLISQGERPTVRSAKVYAL EGTLSEADVDAIKHYVINPVEAREASLEAKTTLKTQVPTPGKVETIAGFNEMDAAAGQKF IDERGLAMDLADLEFCQKYFSEEGREPTITEIKVIDTYWSDHCRHTTFGTELDKVDIDDA AVKAAFERYLEMRHELGRDAKPVCLMDMGTIGAKWLKKNGILTGLDESEEINACTVKVKV DVNGEDEDWLFLFKNETHNHPTEIEPFGGAATCIGGCIRDPLSGRSYVYQAMRVTGAADP TVPVSETLEGKLPQRKLVTTAASGYSSYGNQIGLATGQVDEIYHPGYVAKRMEVGAVVAA TPADHVRRETPAPGDRIILLGGRTGRDGIGGATGSSKAHNVESLELDGAEVQKGNAPVER KLQRLFRRGDACRLIKRCNDFGAGGVSVAVGELADGLYVDLNTVPKKYEGLDGTELAISE SQERMAVDVAAEDVDEFLGYAREENLEATVIATVTEDPRMVMTWNGDKIVNLSREFLASN GASKHQVVRVEEQEAYEVPASWREGSLADRMNAVVTDLNVASNKGLSERFDSTIGAGTVL MPFGGRKQLTPNEAMVAKLPVFGETTTASAMAWGFNPYIMSKNQFTGAYLSVVESLSKLV AAGFEHEKAYLSFQEYFEKLRDEPERWGKPTAAVLGALMAQVDLGAGAIGGKDSMSGSFE NLDVPPTLISFAVAVGSMKRATSPEFKGAGHRIVRIAPRYLADGLTPDKNALLEAFSLVE ELTDPSHHIALAVSTPGYGATAEALFKMTLGNRIGLTLNESIAADDLFKPAYGSFIIELA DNEKIPAASNLVEVGEIGTTTAEYVFKAAGETLDLANVQEAWESGIESVFPYRSKSDEAG KSVETITFDAPKKTVYTGAGVAKPHVVIPVFPGNNCEYDSAAAFERAGADVTTLIVNNLT PAAVAESTQALVDEINKSQIVMIPGGFSGGDEPDGSAKFITAFFRAPAVTEAVRDLLKNR DGLMLGICNGFQALIKLGLVPYGDIVPMTAECPTLTFNTIGRHQSRLVRTRVASNLSPWL SRTAVGDVHTVAISHGEGRFVAAEPVLDLLKANGQIATQYVDEAGVPGMDLAVNPNGSLL AIEGITSPDGRVFGKMGHSERSGNGLYVNVPGDKYQPIFEAGVGYFAA >gi|197324945|gb|DS990229.1| GENE 1382 1451114 - 1451791 739 225 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1304 NR:ns ## KEGG: BBPR_1304 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 225 1 230 230 390 96.0 1e-107 MGDIAQGQQVSKRLPAKQLIPYVLLVVGAVAMAVSFFLPFASAKGDYAEYLKQYGDRVYT AEAGLHNKDVVGLSLLTFLRIYIAGLQSGKLLGGMYLEAVICITLMAVIAVSSLLILLFG VLKKPIAAIVFSVLAVVAFYALRWDFDDRGVLPSSQYGYGIAEYIYPISFVVVVAGAIWF MVSRHIAKTVHQQLANNTTNSTPVNSAPVANGAAVAEPVAPSKAE >gi|197324945|gb|DS990229.1| GENE 1383 1451892 - 1452530 788 212 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1262 NR:ns ## KEGG: BBIF_1262 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 212 1 212 212 364 97.0 1e-99 MGARIDKDGSSFKMSLKATIILAVVIAVIFVFAGVWIRGAITKFFNPQPELTNEVVVKQL EKIQDLTTAKETDYGFEKYEDGGIAFLNKKQFTMFYTYEVRAGVDLAKAQIKIDKDSKTV SITLPAPKIQSVAVNPDSLRFFDKSDSFFNAADVEDTKAAMEDAKKKTEARLDRTQLLKI ANKQAKDVIERLYEPTAEAGMYTVTVTTTNPK >gi|197324945|gb|DS990229.1| GENE 1384 1452908 - 1453729 627 273 aa, chain + ## HITS:1 COG:Cj1254 KEGG:ns NR:ns ## COG: Cj1254 COG3663 # Protein_GI_number: 15792578 # Func_class: L Replication, recombination and repair # Function: G:T/U mismatch-specific DNA glycosylase # Organism: Campylobacter jejuni # 87 255 1 154 160 139 40.0 6e-33 MLSCGAAFSLREANDTEMKTTFTPYDSDDVLTATVNGSGDESKITLSAQDSSNTGARIMR FATDLAARWKGAKAGAVIGGERTMWDMSEHVEHGFGPVWDSESRILVLGSMPSPKSRKAA FYYMHPQNRFWPVMQALFADPADPSDVTGDSLQSRRAFAMRHHIALWDVIASCDITGASD ASIRNATPNDLTPLLRDAPIARIFTTGAKSAQLYRRLIEPRLAATGITIGMTPLPSTSPA NASMRLPALIEAYRLAFQSAGALEMADETVTGL >gi|197324945|gb|DS990229.1| GENE 1385 1453789 - 1454001 185 70 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1264 NR:ns ## KEGG: BBIF_1264 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 70 1 70 70 132 100.0 6e-30 MRYRNGAANRQPQPNDMRRSTTDGRNDQLRHWLADGNLDVAVADFTGMPTGVELVDFYQE RMVLVIANSL >gi|197324945|gb|DS990229.1| GENE 1386 1454305 - 1454682 745 125 aa, chain - ## HITS:1 COG:mll0128 KEGG:ns NR:ns ## COG: mll0128 COG0346 # Protein_GI_number: 13470424 # Func_class: E Amino acid transport and metabolism # Function: Lactoylglutathione lyase and related lyases # Organism: Mesorhizobium loti # 1 125 1 125 127 102 45.0 2e-22 MIDHIGLFVADAAKRADFYEKLLAPLGYVKKVAYPTAVCFANDEDGDGIWLESPKDGNPV VPSHVAFRAKTADAIKAFHEAGLAAGGTDNGKPGPRPNYGPGYYAAFVHDPDGNNIEAML NDYQA >gi|197324945|gb|DS990229.1| GENE 1387 1454775 - 1454993 290 72 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1266 NR:ns ## KEGG: BBIF_1266 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 72 1 72 72 94 100.0 2e-18 MALHETHKYDDIIDMPHHVSRRHPQMSRRQRAAQFMPFAALTGYERVIEQAACDAEAAVA RADAAGDTDFGA >gi|197324945|gb|DS990229.1| GENE 1388 1455038 - 1456627 1509 529 aa, chain - ## HITS:1 COG:SA1196 KEGG:ns NR:ns ## COG: SA1196 COG0389 # Protein_GI_number: 15926944 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Staphylococcus aureus N315 # 9 353 13 307 420 154 30.0 4e-37 MVRGEHVYLAIDLKSFYASVECHDRGLDPLRTHLVVADEERTDKTICLAVSPSLKAYGIP GRARLFEVRQRLASVNAERAMLAPGGRLSGESCDSQDLEHSPRLKASMVIAKPRMAHYLE VSGRVYGVYLRYAAPEHIHVYSIDEVFIDATPYLRALGMGPHEMARAIVRDILAQTGITA TAGIGTNMYLAKVAMDIVAKHMPADEDGVRVAELDEMSYRRLLWNHRPLTDFWRVGRGYA RKLEHAGLLTMGDVARCSIGRASDYYNEDLLYRMFGRNAELLIDHAWGWEPCTIADIQSY EPDAHSISSGQVLTGPADYATGRLIVKEMADALALDLVGKRVLTNRLTLAVGYDIGSLDS IKLDSCADSAMKRASDQAGKSYRGPVSVDRYGRRVPKPATGSIGLGEFTSSSTRIREAMT MLYERIVDPRLLVRRLTVIADDVATANELAAGKRYEQLDLFSRIDSSAEEGDNGHVGISN SDVRREHDMQTALLEVKRKFGRNAVIKAMDMEDGATGQDRNRQIGGHRA >gi|197324945|gb|DS990229.1| GENE 1389 1456693 - 1456887 177 64 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MSPPMRPICHTPERGCSRRLVLWIGSESPVPHVLEGALACQLNSKTFTKNAASSAYGATR TPPA >gi|197324945|gb|DS990229.1| GENE 1390 1456809 - 1458317 2278 502 aa, chain + ## HITS:1 COG:SPy0026 KEGG:ns NR:ns ## COG: SPy0026 COG0034 # Protein_GI_number: 15674270 # Func_class: F Nucleotide transport and metabolism # Function: Glutamine phosphoribosylpyrophosphate amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 1 472 1 472 484 709 69.0 0 MSAELEDIHEECGIFGVWGHPDAARLTYFGLHALQHRGQEGAGIVSNDHGHLIGHRGLGL LTQVFGDEREIGRLTGDKAIGHVRYATAGSGTTDNIQPFIFRFHDGDVALGHNGNLTNCV SLRRKLEDEGAIFHSNSDTEVLMHLIRRSSKPTFMDKLKEALNTVHGGFAYLIMTEDAMI GALDPNGFRPLSLGKMKNGAYVLASETCALDVVGAELVRNIRPGEIIVVNDHGYKIVQYT NKTQLAICSMEYIYFARPDSNIYGVNVHSARKRMGARLAEESPVDADMVIGVPNSSLSAA SGYAEAAHLPNEMGLIKNQYVARTFIQPTQELREQGVRMKLSAVRGVVRGKRVIVIDDSI VRGTTSKRIVQLLKEAGAAEVHMRISSPPLKYPCFYGIDISTTKELIAAKKSVEEIRDFI GADSLAFLSLDGLVESIGLNAQAPYGGLCVAYFNGDYPTALDDYETDFLKSLTPEDRVRL PEFALYKSKYEGNEYTTAPTQQ >gi|197324945|gb|DS990229.1| GENE 1391 1458390 - 1459427 868 345 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|149378138|ref|ZP_01895857.1| Ribosomal protein S7 [Marinobacter algicola DG893] # 5 340 10 340 354 338 51 3e-91 MPQAYENAGVSVEAGYEVVKRIKSHVARTNRPGVVGGIGGFGGLFDLASLGYKEPVLISG TDGVGTKLVVAKMVDKHDTIGVDCVAMCVNDIAAQGAEPLFFLDYIACGKNDPALLEQVV SGVADGCVQSDAGLIGGETAEMPGMYDEDEYDLAGFAVGVAEKSAIVDGSGITAGDVLIG LPSTGVHSNGFSLVRKALFEQAGYTVDTVLPELGGAKLGDVLLTPTKIYVKTLKPLFKAG VVKGVAHITGGGFIENIPRMIPDGLAADITLGSWPVLPIFDVLERAGDIDHKEMYNIFNM GIGMVLAVSAERADETLALLKDNGEAGYAIGTIVPDTDGTQITLK >gi|197324945|gb|DS990229.1| GENE 1392 1459555 - 1460820 2028 421 aa, chain + ## HITS:1 COG:SPy0032 KEGG:ns NR:ns ## COG: SPy0032 COG0151 # Protein_GI_number: 15674274 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylamine-glycine ligase # Organism: Streptococcus pyogenes M1 GAS # 4 421 2 420 421 455 54.0 1e-128 MGQKVLVIGSGAREHAIAHALLRGDSVSEVTVASGNPGMELDGIRTTQINESNHAAFISF MQHNQYDWAFVGPEVPLIEGLVDDFAAAGIKAFGPNKAAAQIEGSKDFAKQLMARHNIPT AQYRTFDNLEDSVAYVREHGAPIVVKADGLAAGKGVTVAMDVDTAITALDDIFIDHRFGK AGAKVVIEDFLEGQEFSLMSFVRGTEFWPMPISQDHKRAYDNDEGPNTGGMGAYSPVPQI GQDVIDTAIDTIVRPTVEAMAAEGTPFTGILYAGLIATADGPKVIEFNARFGDPETEVVL PKLTSDLGAAISAILDGGTPAFTWDSDNATLGVVLASNGYPVNVIKGAKIPSIPVDDASH VYYAGVSNSDQGLVASSGRVLLIETTAPDLKSAQDKVYAIIDKLDTEGMFYRHDIGAKAL K >gi|197324945|gb|DS990229.1| GENE 1393 1460996 - 1463134 2862 712 aa, chain - ## HITS:1 COG:SPy0793 KEGG:ns NR:ns ## COG: SPy0793 COG1368 # Protein_GI_number: 15674836 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily # Organism: Streptococcus pyogenes M1 GAS # 106 703 261 813 824 281 33.0 2e-75 MSDEINDKNDDGTNVADAVSPSGEIEVLDIKRADSSSGRNGGKGGRNGGRREYKPFPGWL YGVLFVVFDMAAVAALQWGVSQSGTRVQLSSPVVGWGFVSKMWTKGNFVFVLNLLLIGAL YLALLMLFNRFWIATPVLLAVAIIVGVIEHFKVSIRYEAILPSDLGFLGSNTGNLMSFTP PGAHWIILGALAVFLVFVALFVVLNHVDGRHGRMIRFDNKGLAAGIRLMVFLLPSLFFGL YCDQVSTVGSWANGFSKALGDTPSMWDSVYDAQRNGPLVSFTRQLNPTIMDEPSDYSEAT MKEVVKRYEAAAEKINASRTKNMTDSTVVYVLSESFSDPARVPGVKLNKDAIPEVRAIKS GTTSGLMLSSGYGGGTANLEYMGLSGLSMANFDSSLTSPYQQLVPGQHWTPTINQMWGAP KNSIAFHPYEPSMYSRATNYKKFGFAHFYTLQGDDIIKHRDKIDRSPYVSDKATYQSALE DISSTDSNQFIQIITMQNHMPYNDWYADNEFKATAADGADSLGSDEVTAIDTYAKGASIT DTETKNFLDELNKLDKPVTVVFYGDHLPGIYETASQDTNNSLALHLTDYFIWSNKASGSQ GKKVDNSVYSSPNYFVAQTAEHMNAKVSPYLAFLTLMHKKVSAMEPPVVNKIQGWDRIPE GQDIYLDAAGNPMAEDEFDEQTKQLMTDYKLIQYDITAGKNYLKDTDFMDLP >gi|197324945|gb|DS990229.1| GENE 1394 1463209 - 1463412 81 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRGSSARIPTGGEWPIRVSDWSHTGRFREISVNVMYHCRRFFTRMSFGIHHGGAWPFPSA RDVAEEP >gi|197324945|gb|DS990229.1| GENE 1395 1463531 - 1463761 269 76 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1272 NR:ns ## KEGG: BBIF_1272 # Name: not_defined # Def: esterase # Organism: B.bifidum # Pathway: not_defined # 1 74 1 74 459 147 100.0 1e-34 MESLPSWVTRLLHIRLVSGPLPTTIWVIVGVGVAILLLWQVFRSDRSKLARQVPIMLVCG GFGLLVMWLLSEKFTS >gi|197324945|gb|DS990229.1| GENE 1396 1463773 - 1464930 1239 385 aa, chain + ## HITS:1 COG:Cgl0942 KEGG:ns NR:ns ## COG: Cgl0942 COG0627 # Protein_GI_number: 19552192 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Corynebacterium glutamicum # 9 368 73 424 426 151 33.0 3e-36 VVFGVSLGWPVIMAAAACCALLGLLVTTIVHARRARRLMAAALIPFVLVSTALRIDSIYG EYQTIGSLIGYSSYHPLSTSHMQKGTLTVDEWLREVLDGKLPPAAAHGKVYSVDISNTAS GFRARTAAVYMPPAALSDTPPELPVLVMLAGQPGNPDRVFSASGIAAILDQYAKAHHGLA PIVISPDQNGDNTVNSLCADTTKVGRAETYLTVDVPRWIKAHLPVSRQARDWAIGGFSQG GTCATQLGPRHPDIFGSIIAVDGELKPTAGSVEHMVAEYFNGDRSAYEAQVPANAIADHA PSNQIMILGAGKRDARSIKNVIVNGQAGVKAGMHVVKIVVPDTGHDWHSVNATLEAAVPW LCAHRWGLGETGLTWSDYPRIEVLQ >gi|197324945|gb|DS990229.1| GENE 1397 1464927 - 1467545 2662 872 aa, chain + ## HITS:1 COG:Cgl0941 KEGG:ns NR:ns ## COG: Cgl0941 COG2898 # Protein_GI_number: 19552191 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 97 855 53 784 804 273 30.0 2e-72 MSDTKVEPESGKESRRKCRTHGRMHALVQDVSVWIHGHRLAVTLSCTFAGLNIAMWIGFA LAGRPLPLRSLRTSLQEFNLLHLLATLLLTRGILQLLVDTIALLVMFSIAETLLGRRRTL TAAFICTLAGTALGLLLCGGIAQLLQGTPVVGRIRFALSPLTLGVGAMMAASAFTRRLWR RRIRLIGYVSIIMVVMFSGNPGDYCLLAAAGFGHVLGALVSKRKTVRQLDDASAADPLHW QLSTSYETRRVFAAIALVLTLGPIIAISSPTHIGPLSSLGLIMSPASPDDGKLASCLAGM ARTDCFFQFNLLRVSMPGAVLRSLLPTAVMLIMTWGLYRGRRLAAWAFIIVGLGESCIAM LYYFVAPLSHAPQGLRSLLLHGAIPASIANVLLPMVFAIAVACSMHHFPIRTDAGRLRRG SAAVVIALAVCIAAYLGFGLLRPGDFRPPATWHGLMHELPSRFIPIGFLNRSRPSFLPRT VAASVVDQAVGLVFWLVVLVVAVRWMREILLVDGRARANAGRLVELDGESMSFMTTWEGN HYWFSATGRSAMAYRVIHGIALTTTGPFGDRGEWSSDLREFARFSMQQSWSPVLYSVHRE QRDQLAAMGWYSLEVGSEMVVDPRQWKTTGKKWQDIRTAINKAKRSGISDVMSTFNEAPN DIREQIEEISEQWAQLKALPEMKFTLGGVEELHDPRVRILYAIDAEGTVLGVTSWLPTWR DGRIIGWTLDFMRHRTDSPNGIMEFLIARMAERLRDEGLEHPECAVEFMSLSAAPLAGMN PQRDNADETGHMDTGTVMLQHALQIVADWMEPAYGFHSLFNFKRKFQPTEEPVYICYPDP AVLAQIGLAVVRAYVPSLTAKEAMGMLRTLQR >gi|197324945|gb|DS990229.1| GENE 1398 1467485 - 1467772 85 95 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1274 NR:ns ## KEGG: BBIF_1274 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 50 95 19 64 64 87 97.0 2e-16 MDTPTVSGFTRRVHDHRHRPNMRLMGDTPKCVAGLPGRTVGMVKSCDCCFLCVATLPCTQ ARHGDCPEPMKGRMAGYRCSVRSMPMASFAVRDGT >gi|197324945|gb|DS990229.1| GENE 1399 1468218 - 1469123 1469 301 aa, chain - ## HITS:1 COG:MT2119 KEGG:ns NR:ns ## COG: MT2119 COG0803 # Protein_GI_number: 15841548 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type metal ion transport system, periplasmic component/surface adhesin # Organism: Mycobacterium tuberculosis CDC1551 # 52 281 111 344 511 119 30.0 7e-27 MQISSIIRRAVAGVAAASMLVAVAACGTSKDNKTAGGEGGGTIEVVASINQWGSVAKDLG GSHVDVTNIMTKTNVEAHDYEPTSQDVAKFGTAKVAVVNGADYDPWASKAASATKATLVT AAETAGIKEGDNPHVWFSAKVRNNTADAITAAYQKADPSHKDDYAKLNKEWHAKEDQLES KIKDASAKTKDVPYAATESVAWYLADDLGMKDATPTGYAQASANESEPTPSDIKAFQDAL KGGSIKMLVFNTQEANSTTDQITGAAKSANVPIVELTEQMPKEYTNLLDWMSALVDQFAK A >gi|197324945|gb|DS990229.1| GENE 1400 1469244 - 1470011 727 255 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1319 NR:ns ## KEGG: BBPR_1319 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 255 1 255 255 427 95.0 1e-118 MSHPTLQSRGNADTAVALLTGADRLSLDSVAFSLADSYASVCAISYDVRPNDEADAGLSI VRRVSRPVGQGVGVGDAEIFDLSDCCLSCSVKHDAGGTLASLRGQARVFLVSLPVGLEAT PVAQYLEDMMRLDSWGDGMGVAAVVNAVGLDEFEEWFFDDDRLCVYGTGDEDGVFDERST GAVVSRLIREATHVLELPVVGRGCLSRHVDADGECACRDIIRAVARRDAVVVEDAHEADL CDIAGLYEVESSVGA >gi|197324945|gb|DS990229.1| GENE 1401 1470010 - 1470357 596 115 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283446|ref|ZP_03646768.1| ribosomal protein L28 [Bifidobacterium bifidum NCIMB 41171] # 1 115 1 115 115 234 100 1e-59 MIAFLFDNDYHYDILASMSKQCQILGTRASTGNRVSHSHRKTRRRFNPNLQTKRYWVPSL GRHVTLTVSVKGMKTIDRIGIEAALARIRRNTPDRLELTKLDPVVRKRVTFHETR >gi|197324945|gb|DS990229.1| GENE 1402 1470434 - 1470739 518 101 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283447|ref|ZP_03646769.1| ribosomal protein S14 [Bifidobacterium bifidum NCIMB 41171] # 1 101 1 101 101 204 100 1e-50 MAKTSKINKQLQREQIVAKYAQRRAQCKRDSVNPHLTADERAEAMRRLHAIPRDASPTRL RNRDSIDGRPRAFNRKFGLSRINLREKAHRGELPGVVKSSW >gi|197324945|gb|DS990229.1| GENE 1403 1470786 - 1471043 445 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283448|ref|ZP_03646770.1| ribosomal protein L31 [Bifidobacterium bifidum NCIMB 41171] # 1 85 1 85 85 176 100 4e-42 MKDNIHPQYGYVVFRDRSTGKAFLTRSTLVAKAASLPTIEWEDGNTYSLVNVEVSSYSHP FYTGRNVVLDTAGQVQKFNKRYGRS >gi|197324945|gb|DS990229.1| GENE 1404 1471255 - 1471377 210 40 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283449|ref|ZP_03646771.1| ribosomal protein L36 [Bifidobacterium bifidum NCIMB 41171] # 1 40 1 40 40 85 100 7e-15 MKVKSSIRSLARKDGSYVVRRRGHLYVINKKNPHWKARQG >gi|197324945|gb|DS990229.1| GENE 1405 1471377 - 1471547 290 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283450|ref|ZP_03646772.1| ribosomal protein L32 [Bifidobacterium bifidum NCIMB 41171] # 1 56 1 56 56 116 100 3e-24 MALPKVRTSRANTHARRSQWKAQAAQLIAVHMPDGEVMHVPHSLVKAVRKGYVKPR >gi|197324945|gb|DS990229.1| GENE 1406 1471756 - 1472877 925 373 aa, chain + ## HITS:1 COG:BH1518 KEGG:ns NR:ns ## COG: BH1518 COG0701 # Protein_GI_number: 15614081 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Bacillus halodurans # 65 370 37 336 337 159 30.0 8e-39 MSWGHHTGTVHDGTGRGHHADGGSPIDANSADGRDHSAHYLFLIIGTPLVAFLIAASAMF ESRGLPIPLVRIGTGAAGLILQTIPFMLVGAMMSAAVSTFVSADALERHVPKSLAGGLAM AMIGGLCLPVCDCMVVPTFANLVRKRLPLPYATALLCAAPVMNPMAIWSTWFAFTGSPWM VAARVGLGMLVASAVGLSFAVRPSRSPAVRDLPLTRGRTPACDGCAVQHAGQDGRSRFMH FLRHTHDDVMRMMPILLSGTIAASIVRTALSPLTDGSGTIDGIGAVTLIAAAMAIAFLCS LCSTSDAVIVASMTGVLPASAMLAFLLFGPMLDLKNTLMLVTECRPRFIIRFVVTVAAAC FLVAVAIHLTTGA >gi|197324945|gb|DS990229.1| GENE 1407 1472882 - 1473682 797 266 aa, chain + ## HITS:1 COG:CAC1591 KEGG:ns NR:ns ## COG: CAC1591 COG3689 # Protein_GI_number: 15894869 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Clostridium acetobutylicum # 146 264 118 238 245 65 26.0 1e-10 MTNTLNFPGSDRHAPAARHAPALPDRIEAICFAALGAAIVYSTTSGSYITLTTPRSLPYL IVGAILLFALSVAAWLGVFHADERSSFRFLVALVIPALLIAVPFQPGNGTGFDTYAAGRA IAIRRDAHKPAGFAHLHGLDEERKTITISDDEFGSWFSHIDHNPQRYIGYRVRLTGFVYK PSTLGAHEFELSRQFMSCCILDMTPFGFTTHYAKTAHLQEHDWVSVDATLVQGTYGIAGH TRQGPMLKITSLHTAKAAPTGYFYWQ >gi|197324945|gb|DS990229.1| GENE 1408 1473679 - 1473948 241 89 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1327 NR:ns ## KEGG: BBPR_1327 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 89 1 89 89 120 97.0 2e-26 MTVLSAAIPAAESTVGFCCGRCVTGDCYDDSDCEHGSTEECEGKACVHTCHENRESHECA FCHLAFDTSEKCHEEILADLKELKAELAA >gi|197324945|gb|DS990229.1| GENE 1409 1474106 - 1474525 504 139 aa, chain - ## HITS:1 COG:Cgl2228 KEGG:ns NR:ns ## COG: Cgl2228 COG0735 # Protein_GI_number: 19553478 # Func_class: P Inorganic ion transport and metabolism # Function: Fe2+/Zn2+ uptake regulation proteins # Organism: Corynebacterium glutamicum # 14 138 16 142 144 123 48.0 8e-29 MIILEERVMANGPVRHTKQKDAVMAQLRGCDDFISAQELHRKLVDSGLRIGLATVYRQLN SLVDSGAADTVRMDGQQLFRLCGDDAHHHHLVCRKCGKTIEIDPPSESWLRKVADGHGFT VESHTLEVFGLCPDCQGKR >gi|197324945|gb|DS990229.1| GENE 1410 1474653 - 1475822 1391 389 aa, chain - ## HITS:1 COG:lin1886 KEGG:ns NR:ns ## COG: lin1886 COG0026 # Protein_GI_number: 16800952 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) # Organism: Listeria innocua # 13 385 4 373 374 375 51.0 1e-104 MPSLSEETHGAVKMLQPGATIGIIGGGQLGRMMALSAKYMGFRIGVLDPTPDCPTAQVAD FQVVGEYDDKTAIHDLAEKSDVLTYEFENVDAESIDEVRHLVAAPQGTDLLRVTQDRIHE KTFINRHGIETAPWREVNTFEELDAAIDDLHYPCVLKTRSGGYDGHGQHVLRNDSDLEKI RARGDRGGGFPPSILEGFVDFAFEASILVSGNGKDYVTFPIVRNDHRNNILHMTIAPAEV SPEIARTAHEMALALARGFELAGTLAIELFITKDGRVVVNELAPRPHNSGHYTIEACSID QFDAHIRGIAGWPLIQPKLLSPAVMVNVLGQHVAPTRALIADHPEWNVHDYGKAQVRHNR KMGHVTVLTDDTAATVEALEATGCWDDLK >gi|197324945|gb|DS990229.1| GENE 1411 1475806 - 1476303 705 165 aa, chain - ## HITS:1 COG:BS_purE KEGG:ns NR:ns ## COG: BS_purE COG0041 # Protein_GI_number: 16077710 # Func_class: F Nucleotide transport and metabolism # Function: Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase # Organism: Bacillus subtilis # 5 165 2 162 162 210 68.0 8e-55 MTDSKPEVAVIMGSASDWETMKHACDMLDQFEVPYVKQVISAHRTPELMAEFAHGARVNG LKVIIAGAGGAAHLPGMVAAQTTLPVIGVPVRSHALSGWDSLLSIVQMPGGIPVATTAVG NSGATNAGLLAVQILSTTDKRLADALQEYRDALKEKVAESNAQLV >gi|197324945|gb|DS990229.1| GENE 1412 1476347 - 1477336 1280 329 aa, chain - ## HITS:1 COG:BS_yogA KEGG:ns NR:ns ## COG: BS_yogA COG0604 # Protein_GI_number: 16078904 # Func_class: C Energy production and conversion; R General function prediction only # Function: NADPH:quinone reductase and related Zn-dependent oxidoreductases # Organism: Bacillus subtilis # 1 325 1 324 329 178 36.0 1e-44 MKAVFAATINNADPLAALEVGELPEPQPRPFWSTVSVKAATVNHHDIWSLKGVGLAAEAT PMILGTDAAGVLDEDIPVRKGLKAGDEVVLYTVIGADGAGVMPGERRTILSERYPGTMAS KTQVPSANVFAKPANLTLDEAAALGTSWLTAYSLLFASAGVKPGDTILIQGAGGGVSTAA VQLAHAAGLEVFVTSRDETKRERALALGADAAFEAGARLPRKVDAVIESVGAATWGHSVR SVRPGGTIAICGATTGDQPGAELTRVFFQDIRVQGNTMGSREDFVRLLRFVEHADIHPVI DSTFGLADARAAFAKVLSGDVFGKVVVRI >gi|197324945|gb|DS990229.1| GENE 1413 1477592 - 1479556 2045 654 aa, chain + ## HITS:1 COG:CAP0106 KEGG:ns NR:ns ## COG: CAP0106 COG1154 # Protein_GI_number: 15004809 # Func_class: H Coenzyme transport and metabolism; I Lipid transport and metabolism # Function: Deoxyxylulose-5-phosphate synthase # Organism: Clostridium acetobutylicum # 6 640 3 573 586 505 44.0 1e-142 MSVGILSAIHGPADVHALDAAELPALCGEIRTTLVRYGHVHGGHIGSNLGMVEATVALHR VFDSPRDRIVFDVSHQSYVHKMLTGRADAYLDPAHHDSVTGFTNPDESAHDQFVLGHTGT SISLACGLAKSRDLTGGMDGGSGIRNVIAVIGDGSLSSAIAFEGLNNAAEQGGNLIIIVN DNEMSIAEDHGGMYGTLARLRATGGKGGPNLFMAFGLDYRYVEAGNDVFALIEAFEQVKD TDHPVVVHIHTRKGLGLPPAKESAEARDSGIPMEGDAAVAAEDSMVFEGRHEANHWQDPD STTGRPLGARKHYGSMAMAALEPRFATEPGLVVISPATPGSNGITRAFRERAGRHYVDTG IAEEHAVAFASGIARAGGRPVLATSATFFQRTFDQLQQELSLNGNPVTLLDFGGGLSGAD NTHSGAFDIAMFGNIPGLTCLAPTSGRAFLDMLAWSTSQSNTSPVVIRVPGDTILNRERS GDLPGDAQDVTDMGSADDTCSNACSEKTTADGTATCPWSRYRTIRRGTTVAVLALGNTLP LGWRVVEALASDVRHPLDATLIDPQQFSTLDAATLTELTGRHRIIVTLEDGQLEGGWGDK VTAFYANAGLRDMRVLNFGAAKEFTDRVPLDALNERYGMTVGNITARIRSESRG >gi|197324945|gb|DS990229.1| GENE 1414 1479905 - 1480192 350 95 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1290 NR:ns ## KEGG: BBIF_1290 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 95 2 96 96 140 100.0 1e-32 MMVVSDSGKEAGTVRPAAVAGAFYPANAGELQAMIDRQMNHARRLVSSLAPRLPQGAPKA VIVPHAGYVYSGSVAALAYALLERTPHSARRAGRA >gi|197324945|gb|DS990229.1| GENE 1415 1480539 - 1481816 1442 425 aa, chain + ## HITS:1 COG:MA2121 KEGG:ns NR:ns ## COG: MA2121 COG2865 # Protein_GI_number: 20090964 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Methanosarcina acetivorans str.C2A # 91 246 179 349 458 87 33.0 5e-17 MIQRVSSQRYYQTMGNDTGRMPAAANDGSVGSTAGGSPDAAAPYATPSFAHGIVPFDHEI SSNQHLTFSYAEQSFASANIPWDPDHDALHLKERGMFTNTALIISDQCPFTIKCATFDGD VKAPISERIELSGSMIRQLNDAMTFLNGHNRRDDGRQCPPDALREALVNAVLHRDYAFPG PTLVNIFPSRVEIVSLGGLMDGIEINDLLNGISQPRNPRLAELFTRLGFSENYGTGIRRI MEEYDEASDNPQIRVGTSSVVMVLPLPSQPSPGGSRTRGDATKGGSAQGADGHDAAQGHA KMYAFPTIMTTATSDPTVALAGTRVIGCVPVRLSDGSALRTSPLIAPGRIASPAATAQLP PNAGQTLEEVTLHCIAQAGVPLSRQQIADNLGATKNQMTYVLHHLVEQGLVLKRGRSRAT RYSMP >gi|197324945|gb|DS990229.1| GENE 1416 1481947 - 1482816 1235 289 aa, chain + ## HITS:1 COG:HI0143 KEGG:ns NR:ns ## COG: HI0143 COG1737 # Protein_GI_number: 16272110 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Haemophilus influenzae # 1 260 1 260 288 119 27.0 5e-27 MQSSVGVRERIDHVYPSLRPAEQAVARYVRSHLDEAAGLTVGQLAGVSRVSQPTVIRFAR KLGFGGYRELRYVLRHPQEERSVTFDPLEGFDLNPWDNPDDVPGKAMTRAKTLIDELHSA MDGKALHKATTLLAQSRMIDIYGVENSMSPALDLCTKLTYLGLQCRFNADAYLQQIGAGH LTKDDTAIAFSHSGSSADTVKALKLAKSAGAHTIAVTNNTGTPLANWADVTLLTGRGDMA IYGNAIFSRVAHSITVDMLYMSVILSDYGRFSTELDRSGRIIADREFRG >gi|197324945|gb|DS990229.1| GENE 1417 1483150 - 1485249 2218 699 aa, chain - ## HITS:1 COG:MT2408 KEGG:ns NR:ns ## COG: MT2408 COG0358 # Protein_GI_number: 15841850 # Func_class: L Replication, recombination and repair # Function: DNA primase (bacterial type) # Organism: Mycobacterium tuberculosis CDC1551 # 1 696 1 635 639 419 37.0 1e-117 MAGMILKEDVEKVRAAADLYDIVSASVTLRPSGTGTFVGLCPFHDEKTPSFSVRPALGVW HCFGCGLGGDVFGYVEHQENIDFREAVELLADKYHIELHYENSGGRTEHSGSKRARLIEA NEEAQRFFMSQIMSKEALAARKLLGGRNFSRADCERFGCGYAPQGWDNLVRYLASKGFTQ QEMLDAGLARQGQRGVYDYFRGRATWPIRDSTGRTLGFGARKLYDDDQIAAKYINTPDTQ LYRKTQVLYGIDLAKSSIVKKRQVVIVEGYTDVMAMHLAGIDTAVATCGTAFGAEHAKIV RRLVADDSLGAVQLVGPLNVPGQALSSRIVFTFDGDAAGQKAALHAFGLDSAFLSQTFVA VADDNLDPCDLRINRGDQAVRSLIEHAKPLYDFVIDAAIGRFDTTYATGQMGAVKAVAPL IAQIRDRSQRDLYARKATRRIGVDLDIMQREVRSAHGQLHVRDEDAYSPRRRFGAGNGEG AGQPRVEPGSDPYANPAERRALEHRAATEQSYFRIDDAVFICEQQFMATLIQIPRAINRT MFASLNEDSFVAPVFRALFLAIQAAGGLPPDDAPQGLWMHNLNKAGGLTLTTVINELAVL QLPLPPSDQDRAVAGSGVPGAANAAAVQLRPASPAETRYAAELLARLLDMGYMRRIAAAR RRMAGMPEGSEKLELLGEITKLETSRKDLQAQVYGNTVG >gi|197324945|gb|DS990229.1| GENE 1418 1485295 - 1486575 1276 426 aa, chain - ## HITS:1 COG:ML0831 KEGG:ns NR:ns ## COG: ML0831 COG0232 # Protein_GI_number: 15827365 # Func_class: F Nucleotide transport and metabolism # Function: dGTP triphosphohydrolase # Organism: Mycobacterium leprae # 16 416 13 416 429 308 44.0 2e-83 MKSEDSGERIPAGEGYTAFDEQRWAGEPPKSKSRTAFERDRARVVHSSALRRLGAKTQIL VAGTDDFARTRLTHTLEVAQIGRQVGAMLGCDPDVVDCACLCHDLGHPPFGHNGERALAD IAAGIGGFEGNAQTLRLLTRLEPKVFHSDGRSAGVNLTRASLDAAVKYPWTLAEAAKYDG GRGVKFCVYPDDEDVFRWLKTGAPEARKPMECQVMDLSDDIAYSVHDVEDAIATGAFNPL VLADPRMIGRIIEATRSWYGSKWDADELERAFGRLRRLRMFPDHFDGSRQALAQLKNITS DLIGRFAWSVENATRDTYGDGPLTRYSANVVIPEETSYEIVALKGIAVYFVMAPREHEPF HQEERQIINDLIDVLMADSPRPSSALEAVLLQDWDEATNDGERLRVAVDQVASLTDSSAL ALHSIL >gi|197324945|gb|DS990229.1| GENE 1419 1486690 - 1488048 1610 452 aa, chain - ## HITS:1 COG:MT3532 KEGG:ns NR:ns ## COG: MT3532 COG0787 # Protein_GI_number: 15843019 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Alanine racemase # Organism: Mycobacterium tuberculosis CDC1551 # 29 436 36 407 408 245 41.0 1e-64 MTLNAASELQFSSPAGEANYRAARRRYPAQAIVDLATLRDNMAHLVDVVGGPHSGTAVMG VVKADAYGHGLLPAALAALAGGATWLGTAQSHEALLLRKLGIGPDRCRILTWVYNGMDVP FDELIDNDIDISVGSLAGIDALADAARRLGKPARVHVKVDSGFGRNGFTPAGFDAALAKL VPLAHEGVLHIVGQWSHLAVADSPDVPEFVASTDRQIESFTEFTRRMEAAGIAPEIRHLA NTAATLNRPEIHLELTRPGIGLYGYEPDPAMGTPRDWHLKPAMTLQAQLGTVKDVEAGHG VSYGRTYLTPDNTSTAIVPLGYADGIHRSASGFDMQGAKHVEKAGGPVRVMTSAGPRLLH VCGRVCMDQFIVDLHGSAAELGVHEGDTVELFGPGRGEQYGEPTADDWARAADTISYEVF TCLRNRIPRLYLHAADVLPAADLAKLDPASLL >gi|197324945|gb|DS990229.1| GENE 1420 1488283 - 1489710 2032 475 aa, chain + ## HITS:1 COG:RSc1588 KEGG:ns NR:ns ## COG: RSc1588 COG0531 # Protein_GI_number: 17546307 # Func_class: E Amino acid transport and metabolism # Function: Amino acid transporters # Organism: Ralstonia solanacearum # 1 473 1 465 476 461 53.0 1e-129 MDLFRKKSVDQLVAESTPLKRTMHTFDLTMLGIGAIIGTGIFVLTGKGALTAGPALMVSF LLAAVCCGFAGLCYAEFASMAPVSGSAYSYAYLAFGELIAFVIGWDLILEYALQAATVSA GWSGYFNKLLEGFGLHLPVELTAAYGTNPNTTTYFNLPGFVIVLLITWVLSIGINQTKKA NDIMVLIKLAIIVLFIVCVIWYVNPSNWKPFAPYGIYQFQPGSTQPYGIVPAASIVFFSF IGFDAVSSSAEETVNPNRTLPRGILYSLVISTILYIVMTLIMTGVVPYEQFAQFIDAPVA GVILKTGMNWLAVIVNLGALIGMTTVMLVQLYGQSRICYAMSRDGLFPKFFGDVHDKYRT PFKGTWFFGLLTAFAGGFININVLFELVNIGTLSAFIIVSAGVMWMRRTQPDAHRGFRAP GVPFTPILAIAFCMVLIAGLNWETWMRFAVWFGLGLIVYFAYSRKRSKLNASDAE >gi|197324945|gb|DS990229.1| GENE 1421 1489880 - 1490407 467 175 aa, chain - ## HITS:1 COG:L36177 KEGG:ns NR:ns ## COG: L36177 COG0454 # Protein_GI_number: 15674159 # Func_class: K Transcription; R General function prediction only # Function: Histone acetyltransferase HPA2 and related acetyltransferases # Organism: Lactococcus lactis # 11 171 5 164 169 87 36.0 9e-18 MTDSASQRRFRHATMRDYPHMQKNYARARELMARNGNPTQWGDTFPKDDVVRDDIAQRRA MLLVDEVGGHERILAQFALCPGEDPTYHHIDGAWLDDDSYVTIHRIASSGLVKHAARDCI AWALKHYGNVRADTHPNNKAMQHVLETSGFARCGLIQLLDRPTDTTRIAYQRHEW >gi|197324945|gb|DS990229.1| GENE 1422 1490597 - 1491082 815 161 aa, chain - ## HITS:1 COG:SP0340 KEGG:ns NR:ns ## COG: SP0340 COG1854 # Protein_GI_number: 15900270 # Func_class: T Signal transduction mechanisms # Function: LuxS protein involved in autoinducer AI2 synthesis # Organism: Streptococcus pneumoniae TIGR4 # 7 161 6 160 160 237 69.0 6e-63 MAEEKPIVESFQLDHTKVKAPYVRYIDTETGPNGDVISNYDLRLVQPNENAIPTAGLHTI EHTIAVLLRERIPGYIDCSPFGCRTGFHLLTWGTHSTEDVARALKESLEFIAYKATWDDV PATTIESCGNYRDHSLFTAKEWCKDILAKGISSDPFERKVV >gi|197324945|gb|DS990229.1| GENE 1423 1491251 - 1493251 2194 666 aa, chain - ## HITS:1 COG:CAC2687 KEGG:ns NR:ns ## COG: CAC2687 COG0514 # Protein_GI_number: 15895945 # Func_class: L Replication, recombination and repair # Function: Superfamily II DNA helicase # Organism: Clostridium acetobutylicum # 11 661 9 585 714 475 38.0 1e-133 MTDQVAALGALKRYFGYDSFRPGQSGLVDAILAGRDVLGVMPTGAGKSVCYQIPATLLPG VTIVISPLISLMRDQVDALNDAGIPAAYVNTTQGGDEQAMVLAQAAQGDIKLLYVAPERL ETERFRNFATRVPISLVAVDEAHCVSQWGQDFRSSYLGIGEFIAGLPARPTVAAFTATAT ERVRCDIIGILGLNAPQVTVTGFDRENLYFDVLKIETKYKAAWVARYVAEHPDESGIVYC ATRKETEALAAALNHTVPALRGAAGGSAADSVMRDGPVAVAYHGGMPADVRNQAQRDFVT DAVPVVVATNAFGMGIDKSNVRYVIHHNMPESIEAYYQEAGRAGRDGEPSRCTLLWNESD IVTRRRPLDMDNDNERLTPEERETVRMSKRRLLDGMIGYCRTTDCLHVYMTRYFGENTPR TGICTGGCTNCDSTFETLDVTDIARSISRCVHDAMYDYDDQGRPTCGPVRQGLGSGKIVA ILRGSKAKDLIARHLDRCPSYGRLHDAPEARIRDVLSQMATDGFLSIAEGRLPIVGFGQR AAETVAPEFRYEIKRVERKAAGAGTGVTSRTDSSSKSAASDGPALGSYAPDDENETLFQK LRELRLSIARENSLPPYMVFNDRTLRDMARLRPITDAQFLAVNGVGDSKLAKYGKRFMEA IAGFDD >gi|197324945|gb|DS990229.1| GENE 1424 1493438 - 1494625 1859 395 aa, chain - ## HITS:1 COG:MT1110 KEGG:ns NR:ns ## COG: MT1110 COG0626 # Protein_GI_number: 15840515 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Mycobacterium tuberculosis CDC1551 # 18 393 15 388 388 440 62.0 1e-123 MTITISTNAAALANTTLATRAIHAGQEPDPTTGAVITPIYMTSTFKQDGVGGLRNGYDYS RSVNPTRNSFDAQLAAVEGAKYALSFSSGLAAIDVLLRATLKPDDNILLGNDVYGGTYRL LAKVFVPWGIGLDVVDITDTAAVAAALEAKQYRYIWVETPSNPLLNITDIAATADVAHRH GTKVVVDNTFASPVLQHPLDDGADAVVYSTTKYIGGHSDVVGGAIVLNDEETRDAVAFLQ NAAGAVPSPFDSWLDIRGLKTLAVRVQRHSENALKIAQWLETRPEVERVWYPGLESHPGH EIAARQMHGGFGGMVSVQLAAGFEAAKRFAGATQIFTLAESLGGVESLIEHPGAMTHASV AGTTLEVPANLVRLSVGIEGADDLIADLEQAFAAI >gi|197324945|gb|DS990229.1| GENE 1425 1494727 - 1495737 539 336 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|148988856|ref|ZP_01820271.1| 50S ribosomal protein L9 [Streptococcus pneumoniae SP6-BS73] # 1 305 1 299 308 212 40 5e-53 MTIHNSLSELIGNTPLVKLHHVTDGIKATIAVKVEYFNPGGSSKDRIAERIIDAAERSGQ LKPGGVIVEPTSGNTGVGLALVAQQRGYRTIFTLPDKVSESKRAVLRAYGAEVVVTPTDA GPDDPRSYYQVAERLANTIPGGFRPNQYDNPNGPLSHYYTTGPEIWEATDHKVTHFVAGI GTGGTISGTGKYLKEVSDGAVTVVGSDPEGSIYSDPSDVHQYDIEGVGEDFYPKAFDRNI TDDIVQVTDREAFEMTRRLAAEEGLLVGGSSGMAVVSALKYAREHDLDSNQVVVVLLPDS GRSYLEKIFNDDWMRENGYGDIVERTSRPSLAEQYL >gi|197324945|gb|DS990229.1| GENE 1426 1496162 - 1496779 399 205 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1303 NR:ns ## KEGG: BBIF_1303 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 205 1 205 205 377 100.0 1e-103 MKKISRIRWLTTLMGLVVLMFTCAGCGQTAAQSNVPKPDASQSRVRIYESMVELEDDSPL IITGEISRTSVIRDIDDITDFTLLDVKVSQTLKGTVNSGSIIVRQTGSAEQGSAETLLQT GDVVMLFLTPTDLPGEQSSQYYVTGATAGVYRVTDDTQQSWNVLRSQHGNASDAWQPVFE RVNVDSGDELPSELTPAQVYEQVKD >gi|197324945|gb|DS990229.1| GENE 1427 1496789 - 1497409 535 206 aa, chain - ## HITS:1 COG:no KEGG:Jden_0210 NR:ns ## KEGG: Jden_0210 # Name: not_defined # Def: hypothetical protein # Organism: J.denitrificans # Pathway: not_defined # 48 206 18 180 180 99 40.0 7e-20 MLCCYFTDINPVSVTFRSYQKGAKMSKLQRCRKWPISLVSTLLSFLFLMSMVPVASAYSY SKSHWLNKNQVVMLMATVKGNYLTSAKQAVSNINSATKVGFSTGTRMVWQATSQNFGKNG WEGQSAYTFLASGYTKDAVSRVNTYYMKSSYPVARMRVLWLHEFSHCWGLGHSTINTVMY KSASDAYNNGVRYLTSDDIKGINSRY Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:12:40 2011 Seq name: gi|197324944|gb|DS990230.1| Bifidobacterium bifidum NCIMB 41171 supercont2.2 genomic scaffold, whole genome shotgun sequence Length of sequence - 552304 bp Number of predicted genes - 482, with homology - 439 Number of transcription units - 287, operones - 113 average op.length - 2.7 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 44 - 295 321 ## BBIF_1746 hypothetical protein + Term 366 - 421 19.7 - Term 348 - 415 23.1 2 2 Op 1 . - CDS 428 - 1207 976 ## COG0778 Nitroreductase - Term 1281 - 1335 0.6 3 2 Op 2 . - CDS 1465 - 1881 430 ## BBIF_1744 hypothetical protein 4 3 Op 1 . + CDS 1966 - 2655 457 ## COG0406 Fructose-2,6-bisphosphatase 5 3 Op 2 . + CDS 2661 - 2837 158 ## BBIF_1742 hypothetical protein 6 4 Tu 1 . - CDS 3016 - 4038 1288 ## COG1609 Transcriptional regulators - Prom 4100 - 4159 4.3 + Prom 4062 - 4121 2.6 7 5 Tu 1 . + CDS 4371 - 6503 3374 ## COG1785 Alkaline phosphatase + Term 6554 - 6597 12.1 8 6 Op 1 29/0.000 + CDS 6882 - 8765 2820 ## COG0443 Molecular chaperone 9 6 Op 2 . + CDS 8768 - 9472 940 ## COG0576 Molecular chaperone GrpE (heat shock protein) + Term 9486 - 9542 5.5 - Term 9759 - 9798 -1.0 10 7 Tu 1 . - CDS 9804 - 9956 113 ## 11 8 Op 1 3/0.000 + CDS 9931 - 10938 1360 ## COG2214 DnaJ-class molecular chaperone 12 8 Op 2 . + CDS 11032 - 11544 404 ## COG0789 Predicted transcriptional regulators + Term 11565 - 11604 8.2 13 9 Tu 1 . - CDS 11560 - 11790 212 ## + Prom 11690 - 11749 4.2 14 10 Tu 1 . + CDS 11900 - 14404 2924 ## COG4409 Neuraminidase (sialidase) + Term 14463 - 14510 11.4 + Prom 14476 - 14535 6.1 15 11 Tu 1 . + CDS 14677 - 20064 6296 ## COG4409 Neuraminidase (sialidase) + Term 20153 - 20195 11.4 16 12 Tu 1 . + CDS 20366 - 21082 649 ## COG0637 Predicted phosphatase/phosphohexomutase - TRNA 21294 - 21369 78.8 # Ala CGC 0 0 17 13 Op 1 . - CDS 21579 - 22277 200 ## PROTEIN SUPPORTED gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 18 13 Op 2 . - CDS 22312 - 22548 152 ## gi|313139909|ref|ZP_07802102.1| predicted protein 19 14 Tu 1 . + CDS 22547 - 23548 1216 ## COG0313 Predicted methyltransferases 20 15 Tu 1 . - CDS 23550 - 23981 359 ## BBIF_1729 hypothetical protein 21 16 Tu 1 . - CDS 24092 - 24922 669 ## BBIF_1728 hypothetical protein 22 17 Tu 1 . + CDS 25072 - 26934 2722 ## COG0143 Methionyl-tRNA synthetase + Term 26949 - 26987 0.5 + Prom 27013 - 27072 2.1 23 18 Tu 1 . + CDS 27178 - 27708 366 ## BBPR_1785 hypothetical protein + Term 27913 - 27952 -0.9 24 19 Tu 1 . - CDS 28474 - 28623 141 ## BBIF_1725 hypothetical protein 25 20 Op 1 . + CDS 28928 - 30382 1129 ## COG2211 Na+/melibiose symporter and related transporters 26 20 Op 2 . + CDS 30316 - 30492 227 ## BLJ_1909 Na-galactoside symporter 27 20 Op 3 . + CDS 30558 - 31517 964 ## COG0084 Mg-dependent DNase + Prom 31595 - 31654 2.6 28 21 Tu 1 . + CDS 31681 - 34143 3236 ## COG3158 K+ transporter + Prom 34573 - 34632 1.5 29 22 Op 1 . + CDS 34739 - 35305 322 ## BBIF_1721 hypothetical protein 30 22 Op 2 . + CDS 35363 - 36229 1189 ## BBIF_1720 hypothetical protein + Prom 36303 - 36362 2.2 31 23 Tu 1 . + CDS 36442 - 37179 923 ## COG1418 Predicted HD superfamily hydrolase + Term 37248 - 37292 -0.1 - Term 37178 - 37240 19.0 32 24 Op 1 36/0.000 - CDS 37257 - 38543 1456 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 33 24 Op 2 . - CDS 38573 - 40006 1721 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 40155 - 40214 2.6 34 25 Tu 1 . + CDS 40487 - 42652 2694 ## BBIF_1716 hypothetical protein 35 26 Tu 1 . - CDS 42996 - 43082 68 ## + Prom 43068 - 43127 1.8 36 27 Op 1 . + CDS 43189 - 43389 67 ## 37 27 Op 2 . + CDS 43420 - 45099 1423 ## BBIF_1714 hypothetical protein 38 28 Tu 1 . - CDS 45223 - 46122 1311 ## COG2022 Uncharacterized enzyme of thiazole biosynthesis 39 29 Tu 1 . - CDS 46245 - 46679 340 ## BBPR_1770 ThiS protein + Prom 46838 - 46897 3.5 40 30 Op 1 . + CDS 47033 - 47428 150 ## BBIF_1711 hypothetical protein 41 30 Op 2 . + CDS 47425 - 48840 1712 ## BBIF_1711 hypothetical protein 42 31 Tu 1 . + CDS 48987 - 50051 1120 ## COG1216 Predicted glycosyltransferases 43 32 Tu 1 . - CDS 50136 - 50486 364 ## BBIF_1709 hypothetical protein - Term 50685 - 50728 1.2 44 33 Op 1 . - CDS 50837 - 51577 605 ## BBIF_1707 hypothetical protein 45 33 Op 2 . - CDS 51579 - 52703 1002 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes 46 33 Op 3 . - CDS 52684 - 52758 62 ## 47 34 Tu 1 . - CDS 52863 - 55100 3148 ## COG0855 Polyphosphate kinase 48 35 Tu 1 . - CDS 55988 - 56569 -248 ## BBIF_1704 hypothetical protein 49 36 Op 1 . + CDS 56597 - 57409 526 ## BBIF_1703 hypothetical protein 50 36 Op 2 . + CDS 57406 - 58401 430 ## COG4962 Flp pilus assembly protein, ATPase CpaF 51 37 Tu 1 . + CDS 58604 - 59131 157 ## BBIF_1701 conserved hypothetical membrane spanning protein + Term 59183 - 59215 0.3 52 38 Tu 1 . - CDS 59062 - 59337 224 ## BBIF_1700 hypothetical protein 53 39 Tu 1 . + CDS 59285 - 59710 127 ## BBPR_1759 hypothetical protein + Term 59754 - 59806 11.0 54 40 Tu 1 . - CDS 59764 - 60018 87 ## 55 41 Tu 1 . + CDS 59915 - 60205 230 ## BBIF_1698 hypothetical protein + Term 60273 - 60316 3.1 56 42 Tu 1 . + CDS 60843 - 61250 269 ## BBIF_1697 hypothetical protein 57 43 Tu 1 . + CDS 61362 - 62480 1037 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 58 44 Op 1 1/0.121 + CDS 62671 - 65535 1406 ## COG2812 DNA polymerase III, gamma/tau subunits 59 44 Op 2 . + CDS 65544 - 66146 560 ## COG0353 Recombinational DNA repair protein (RecF pathway) + Term 66232 - 66281 2.0 + Prom 66227 - 66286 1.7 60 45 Op 1 1/0.121 + CDS 66335 - 67099 983 ## COG0527 Aspartokinases 61 45 Op 2 . + CDS 67170 - 67736 885 ## COG0527 Aspartokinases 62 46 Tu 1 . - CDS 68143 - 69237 1402 ## COG0136 Aspartate-semialdehyde dehydrogenase + Prom 69204 - 69263 1.8 63 47 Tu 1 . + CDS 69406 - 70026 709 ## BBIF_1689 hypothetical protein 64 48 Tu 1 . - CDS 69987 - 70250 110 ## + Prom 70102 - 70161 1.7 65 49 Tu 1 . + CDS 70238 - 72166 2122 ## BBPR_1747 serine/threonine protein kinase (EC:2.7.11.1) 66 50 Tu 1 . + CDS 72466 - 72687 137 ## BBIF_1687 hypothetical protein + Term 72809 - 72857 4.4 - Term 72797 - 72845 5.2 67 51 Op 1 . - CDS 72873 - 74333 1632 ## COG1409 Predicted phosphohydrolases 68 51 Op 2 . - CDS 74270 - 74443 111 ## - Prom 74489 - 74548 1.7 + Prom 74629 - 74688 2.6 69 52 Tu 1 . + CDS 74765 - 76675 2952 ## COG0119 Isopropylmalate/homocitrate/citramalate synthases + Term 76691 - 76742 19.0 - Term 76683 - 76726 14.7 70 53 Tu 1 . - CDS 76844 - 79342 3654 ## COG0744 Membrane carboxypeptidase (penicillin-binding protein) - Prom 79512 - 79571 2.4 - Term 79761 - 79794 -0.9 71 54 Tu 1 . - CDS 79802 - 81025 1703 ## COG0562 UDP-galactopyranose mutase - Prom 81102 - 81161 2.3 72 55 Tu 1 . - CDS 81178 - 82086 835 ## COG1272 Predicted membrane protein, hemolysin III homolog - Prom 82135 - 82194 3.1 73 56 Tu 1 . + CDS 82608 - 86675 6176 ## COG1404 Subtilisin-like serine proteases + Term 86690 - 86737 14.8 + Prom 87009 - 87068 3.0 74 57 Op 1 . + CDS 87121 - 88518 1122 ## BBIF_1680 hypothetical protein belonging to the PAP2 superfamily 75 57 Op 2 . + CDS 88603 - 91521 3665 ## COG0550 Topoisomerase IA 76 57 Op 3 22/0.000 + CDS 91602 - 92336 646 ## COG0125 Thymidylate kinase 77 57 Op 4 . + CDS 92333 - 93517 1352 ## COG0470 ATPase involved in DNA replication - Term 93347 - 93391 1.8 78 58 Tu 1 . - CDS 93528 - 94634 1046 ## COG1609 Transcriptional regulators 79 59 Tu 1 . + CDS 94495 - 94788 62 ## - Term 94706 - 94758 11.4 80 60 Tu 1 . - CDS 94772 - 95032 509 ## BBIF_1675 phosphocarrier protein HPr 81 61 Op 1 . + CDS 95031 - 95294 162 ## 82 61 Op 2 . + CDS 95389 - 97047 2602 ## COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) + Term 97099 - 97158 10.5 - Term 96982 - 97014 2.2 83 62 Tu 1 . - CDS 97059 - 97196 64 ## - Prom 97233 - 97292 1.7 + Prom 97176 - 97235 3.0 84 63 Tu 1 . + CDS 97286 - 98137 570 ## COG3177 Uncharacterized conserved protein 85 64 Tu 1 . - CDS 98189 - 99181 795 ## BBIF_1671 hypothetical protein 86 65 Tu 1 . + CDS 99416 - 99592 234 ## BLJ_1950 sugar (glycoside-pentoside-hexuronide) transporter + Term 99708 - 99735 0.3 + Prom 99733 - 99792 2.1 87 66 Op 1 5/0.000 + CDS 99829 - 101595 2613 ## COG0672 High-affinity Fe2+/Pb2+ permease 88 66 Op 2 3/0.000 + CDS 101633 - 102307 1254 ## COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport + Term 102322 - 102371 11.1 89 67 Op 1 4/0.000 + CDS 102413 - 103699 1629 ## COG4393 Predicted membrane protein 90 67 Op 2 10/0.000 + CDS 103720 - 105021 1662 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 91 67 Op 3 36/0.000 + CDS 105081 - 106349 185 ## PROTEIN SUPPORTED gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 92 67 Op 4 . + CDS 106372 - 107178 1181 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 93 67 Op 5 . + CDS 107171 - 107749 749 ## BBIF_1663 hypothetical protein 94 67 Op 6 . + CDS 107766 - 107969 135 ## 95 67 Op 7 . + CDS 107978 - 108685 1073 ## COG2188 Transcriptional regulators 96 68 Tu 1 . + CDS 108990 - 109388 522 ## COG0561 Predicted hydrolases of the HAD superfamily + Prom 109496 - 109555 5.7 97 69 Tu 1 . + CDS 109674 - 111014 2315 ## COG1455 Phosphotransferase system cellobiose-specific component IIC 98 70 Op 1 8/0.000 + CDS 111418 - 111717 566 ## COG1440 Phosphotransferase system cellobiose-specific component IIB 99 70 Op 2 2/0.034 + CDS 111865 - 112194 479 ## COG1447 Phosphotransferase system cellobiose-specific component IIA 100 70 Op 3 1/0.121 + CDS 112256 - 113689 2363 ## COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase 101 71 Op 1 . + CDS 113794 - 113985 260 ## COG0561 Predicted hydrolases of the HAD superfamily 102 71 Op 2 . + CDS 114050 - 114586 479 ## BBIF_1654 hypothetical protein 103 71 Op 3 . + CDS 114590 - 115876 1660 ## COG4905 Predicted membrane protein 104 72 Tu 1 . + CDS 116004 - 116846 938 ## COG0561 Predicted hydrolases of the HAD superfamily 105 73 Tu 1 . - CDS 116756 - 117025 176 ## BBIF_1651 hypothetical protein - Prom 117166 - 117225 69.1 + TRNA 117158 - 117230 77.1 # Lys TTT 0 0 106 74 Tu 1 . - CDS 117227 - 117430 122 ## + Prom 118172 - 118231 1.9 107 75 Op 1 . + CDS 118274 - 119254 802 ## COG3764 Sortase (surface protein transpeptidase) 108 75 Op 2 . + CDS 119330 - 120445 1197 ## BBPR_1708 cell surface protein 109 75 Op 3 . + CDS 120484 - 121584 1211 ## BBIF_1649 cell surface protein with LPXTG anchor + Term 121624 - 121661 3.1 110 75 Op 4 . + CDS 121675 - 123339 2627 ## BBPR_1707 fimbrial subunit FimA + Term 123402 - 123451 18.3 111 76 Tu 1 . + CDS 123757 - 123885 75 ## + Prom 124069 - 124128 2.4 112 77 Tu 1 . + CDS 124303 - 124641 301 ## BBPR_1705 regulatory protein 113 78 Op 1 35/0.000 + CDS 124745 - 126502 187 ## PROTEIN SUPPORTED gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P 114 78 Op 2 . + CDS 126508 - 128376 201 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 - Term 128182 - 128237 4.9 115 79 Op 1 . - CDS 128419 - 128868 353 ## BBPR_1702 hypothetical protein 116 79 Op 2 . - CDS 128955 - 129362 139 ## COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters - Prom 129612 - 129671 80.3 117 80 Op 1 . - CDS 132073 - 132342 163 ## BBPR_1700 hypothetical protein 118 80 Op 2 . - CDS 132339 - 132872 371 ## gi|313140730|ref|ZP_07802923.1| predicted protein 119 80 Op 3 . - CDS 132833 - 133084 161 ## + Prom 132810 - 132869 2.5 120 81 Tu 1 . + CDS 132996 - 134570 1648 ## COG4690 Dipeptidase + Term 134653 - 134697 10.1 - Term 134638 - 134685 12.1 121 82 Op 1 . - CDS 134728 - 136632 1683 ## BBPR_1698 hypothetical protein 122 82 Op 2 1/0.121 - CDS 136696 - 137730 1291 ## COG0463 Glycosyltransferases involved in cell wall biogenesis - Prom 137787 - 137846 2.9 123 83 Tu 1 . - CDS 137898 - 138662 1050 ## COG1309 Transcriptional regulator 124 84 Op 1 . + CDS 138776 - 139072 137 ## BBIF_1636 hypothetical protein 125 84 Op 2 1/0.121 + CDS 139148 - 140389 1696 ## COG0552 Signal recognition particle GTPase + Term 140425 - 140466 9.1 + Prom 140525 - 140584 2.0 126 85 Op 1 24/0.000 + CDS 140684 - 141982 1622 ## COG0004 Ammonia permease 127 85 Op 2 3/0.000 + CDS 141984 - 142322 515 ## COG0347 Nitrogen regulatory protein PII + Term 142329 - 142372 8.6 + Prom 142413 - 142472 2.9 128 85 Op 3 . + CDS 142602 - 144473 1640 ## COG2844 UTP:GlnB (protein PII) uridylyltransferase 129 86 Tu 1 . - CDS 144819 - 146225 1313 ## COG0534 Na+-driven multidrug efflux pump - Prom 146385 - 146444 3.0 130 87 Tu 1 . + CDS 146279 - 146449 162 ## + Prom 146541 - 146600 2.1 131 88 Op 1 . + CDS 146627 - 148060 1779 ## COG0305 Replicative DNA helicase 132 88 Op 2 10/0.000 + CDS 148063 - 149646 1575 ## COG0769 UDP-N-acetylmuramyl tripeptide synthase 133 88 Op 3 . + CDS 149690 - 150439 942 ## COG3442 Predicted glutamine amidotransferase 134 89 Op 1 . + CDS 150618 - 150917 421 ## BBIF_1627 hypothetical protein 135 89 Op 2 . + CDS 150937 - 152730 1973 ## COG0661 Predicted unusual protein kinase + Term 152759 - 152794 2.1 136 90 Tu 1 . - CDS 152798 - 155446 2590 ## COG2217 Cation transport ATPase - Prom 155480 - 155539 4.7 + Prom 155420 - 155479 2.5 137 91 Op 1 . + CDS 155521 - 155841 382 ## COG1937 Uncharacterized protein conserved in bacteria 138 91 Op 2 . + CDS 155885 - 157216 1429 ## COG1322 Uncharacterized protein conserved in bacteria 139 92 Op 1 . + CDS 157350 - 158021 766 ## BBIF_1622 hypothetical protein 140 92 Op 2 . + CDS 158024 - 158908 698 ## COG0566 rRNA methylases 141 93 Op 1 . + CDS 159059 - 159343 148 ## COG1131 ABC-type multidrug transport system, ATPase component 142 93 Op 2 . + CDS 159355 - 159852 170 ## BBPR_1678 TP-binding protein of ABC transporter system 143 94 Op 1 31/0.000 + CDS 160025 - 160324 428 ## COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit 144 94 Op 2 21/0.000 + CDS 160327 - 161865 472 ## PROTEIN SUPPORTED gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 145 94 Op 3 . + CDS 161890 - 163389 2363 ## COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) + Term 163442 - 163493 14.3 + Prom 163508 - 163567 3.2 146 95 Op 1 . + CDS 163605 - 164648 1060 ## COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins 147 95 Op 2 . + CDS 164645 - 164959 569 ## BDP_1986 hypothetical protein 148 96 Op 1 . + CDS 165100 - 166812 2377 ## COG1232 Protoporphyrinogen oxidase + Term 166822 - 166861 5.7 + Prom 166852 - 166911 1.6 149 96 Op 2 . + CDS 166984 - 169083 2311 ## COG1158 Transcription termination factor + Term 169129 - 169174 8.8 - Term 169047 - 169107 6.2 150 97 Tu 1 . - CDS 169181 - 170410 1339 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase - Prom 170430 - 170489 6.2 + Prom 170436 - 170495 7.5 151 98 Tu 1 . + CDS 170619 - 171122 606 ## COG1522 Transcriptional regulators 152 99 Op 1 . + CDS 171235 - 171663 592 ## COG1605 Chorismate mutase + Term 171700 - 171729 1.2 153 99 Op 2 . + CDS 171767 - 173971 2457 ## BBPR_1666 hypothetical protein + Term 174040 - 174079 10.4 - Term 174028 - 174067 10.4 154 100 Op 1 . - CDS 174089 - 176830 4377 ## COG0525 Valyl-tRNA synthetase - Term 176840 - 176880 7.3 155 100 Op 2 . - CDS 176913 - 178469 1995 ## COG0747 ABC-type dipeptide transport system, periplasmic component 156 100 Op 3 . - CDS 178553 - 179215 624 ## COG0177 Predicted EndoIII-related endonuclease 157 100 Op 4 . - CDS 179228 - 179989 992 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - Prom 180039 - 180098 2.3 158 101 Tu 1 . + CDS 180139 - 180894 712 ## BBPR_1661 hypothetical protein - Term 181261 - 181310 5.7 159 102 Tu 1 . - CDS 181372 - 181959 689 ## COG1971 Predicted membrane protein - Prom 182197 - 182256 3.3 160 103 Tu 1 . + CDS 182212 - 182481 236 ## + Term 182545 - 182589 -0.6 161 104 Tu 1 . - CDS 182488 - 182982 868 ## COG0221 Inorganic pyrophosphatase - Term 183058 - 183105 16.2 162 105 Tu 1 . - CDS 183149 - 185455 3023 ## COG0366 Glycosidases - Prom 185484 - 185543 1.8 + Prom 185420 - 185479 1.5 163 106 Tu 1 . + CDS 185688 - 187961 1865 ## BBIF_1598 LPXTG-motif cell wall anchor domain protein + Term 188035 - 188079 7.4 164 107 Op 1 . - CDS 187862 - 188077 258 ## 165 107 Op 2 . - CDS 188111 - 188338 190 ## BBPR_1656 hypothetical protein 166 108 Tu 1 . + CDS 188682 - 189029 458 ## BBIF_1596 hypothetical protein - TRNA 188986 - 189062 83.4 # Met CAT 0 0 + Prom 189137 - 189196 2.6 167 109 Tu 1 . + CDS 189230 - 190264 1350 ## COG1897 Homoserine trans-succinylase + Term 190290 - 190343 5.6 + Prom 190580 - 190639 2.7 168 110 Op 1 40/0.000 + CDS 190794 - 191606 1206 ## COG0356 F0F1-type ATP synthase, subunit a + Prom 191624 - 191683 2.1 169 110 Op 2 37/0.000 + CDS 191718 - 191948 512 ## COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K 170 110 Op 3 38/0.000 + CDS 192002 - 192529 862 ## COG0711 F0F1-type ATP synthase, subunit b 171 110 Op 4 41/0.000 + CDS 192559 - 193386 964 ## COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 172 110 Op 5 42/0.000 + CDS 193460 - 195139 2219 ## COG0056 F0F1-type ATP synthase, alpha subunit 173 110 Op 6 42/0.000 + CDS 195143 - 196081 1137 ## COG0224 F0F1-type ATP synthase, gamma subunit 174 110 Op 7 . + CDS 196090 - 197574 1943 ## COG0055 F0F1-type ATP synthase, beta subunit 175 110 Op 8 . + CDS 197574 - 197876 325 ## BBPR_1646 ATP synthase subunit epsilon + Term 197921 - 197963 11.4 + Prom 198178 - 198237 1.7 176 111 Tu 1 . + CDS 198386 - 198898 307 ## COG1637 Predicted nuclease of the RecB family + Term 198909 - 198944 -0.8 177 112 Op 1 . - CDS 199109 - 199915 729 ## COG2508 Regulator of polyketide synthase expression 178 112 Op 2 . - CDS 199958 - 202078 2042 ## BBIF_1584 conserved hypothetical membrane spanning protein + Prom 202109 - 202168 3.7 179 113 Tu 1 . + CDS 202203 - 203045 687 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase + Term 203109 - 203160 11.7 - Term 203162 - 203208 3.0 180 114 Tu 1 . - CDS 203224 - 203805 738 ## COG1268 Uncharacterized conserved protein - Prom 204033 - 204092 3.3 181 115 Op 1 7/0.000 + CDS 204052 - 205962 2467 ## COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit 182 115 Op 2 . + CDS 205962 - 207596 2411 ## COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 183 116 Tu 1 . + CDS 207700 - 217101 12915 ## COG4982 3-oxoacyl-[acyl-carrier protein] reductase + Term 217166 - 217200 6.7 184 117 Op 1 . + CDS 217477 - 218040 202 ## COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) 185 117 Op 2 . + CDS 218129 - 218314 66 ## 186 117 Op 3 . + CDS 218364 - 219242 669 ## COG0340 Biotin-(acetyl-CoA carboxylase) ligase + Term 219331 - 219359 -1.0 + TRNA 219352 - 219425 79.8 # Gly TCC 0 0 187 118 Tu 1 . + CDS 219718 - 223122 5709 ## BBPR_1635 NagC/XylR-type transciptional regulator (EC:3.2.1.35) + Term 223238 - 223274 -1.0 188 119 Op 1 . + CDS 223336 - 224031 928 ## BBIF_1575 conserved hypothetical membrane spanning protein 189 119 Op 2 26/0.000 + CDS 224068 - 224433 448 ## PROTEIN SUPPORTED gi|224283645|ref|ZP_03646967.1| 30S ribosomal protein S15 + Term 224443 - 224479 7.0 190 119 Op 3 . + CDS 224694 - 227357 1459 ## PROTEIN SUPPORTED gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase + Term 227448 - 227484 7.0 191 120 Op 1 . - CDS 227515 - 227706 97 ## gi|313140800|ref|ZP_07802993.1| predicted protein 192 120 Op 2 . - CDS 227618 - 228382 357 ## BBPR_1630 LacI family transcriptional regulator 193 120 Op 3 . - CDS 228382 - 228609 131 ## BBPR_1629 LacI family transcriptional regulator + Prom 228661 - 228720 3.0 194 121 Op 1 . + CDS 228764 - 229336 971 ## COG1704 Uncharacterized conserved protein 195 121 Op 2 . + CDS 229400 - 231658 2804 ## BBPR_1627 hypothetical protein + Term 231677 - 231732 18.5 - Term 231665 - 231720 21.0 196 122 Op 1 . - CDS 231739 - 232290 626 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases 197 122 Op 2 24/0.000 - CDS 232567 - 233559 1638 ## COG0208 Ribonucleotide reductase, beta subunit 198 122 Op 3 18/0.000 - CDS 233846 - 236041 3229 ## COG0209 Ribonucleotide reductase, alpha subunit 199 122 Op 4 11/0.000 - CDS 236092 - 236655 746 ## COG1780 Protein involved in ribonucleotide reduction 200 122 Op 5 . - CDS 236652 - 236909 482 ## COG0695 Glutaredoxin and related proteins - Prom 236945 - 237004 2.3 201 123 Tu 1 . + CDS 237361 - 238221 1377 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) + Term 238240 - 238300 -0.0 202 124 Tu 1 . - CDS 238442 - 238957 491 ## COG2826 Transposase and inactivated derivatives, IS30 family 203 125 Tu 1 . + CDS 239246 - 239512 127 ## BLJ_1247 integrase catalytic subunit + Prom 239593 - 239652 1.5 204 126 Op 1 . + CDS 239673 - 241265 2063 ## COG0826 Collagenase and related proteases 205 126 Op 2 . + CDS 241314 - 242324 1194 ## COG1496 Uncharacterized conserved protein 206 127 Op 1 . + CDS 242688 - 243488 269 ## PROTEIN SUPPORTED gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 207 127 Op 2 . + CDS 243522 - 244199 731 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) + Prom 244204 - 244263 1.9 208 128 Tu 1 . + CDS 244348 - 245814 1971 ## BBPR_1613 hypothetical protein + Term 245968 - 246008 8.0 209 129 Tu 1 . + CDS 246050 - 247405 1788 ## COG3579 Aminopeptidase C + Term 247506 - 247549 1.0 210 130 Op 1 . + CDS 247623 - 248654 1058 ## BBIF_1555 hypothetical protein 211 130 Op 2 . + CDS 248865 - 249995 1407 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase + Term 250061 - 250114 16.5 212 131 Tu 1 . - CDS 250140 - 251522 1606 ## COG0477 Permeases of the major facilitator superfamily 213 132 Tu 1 . - CDS 251644 - 252249 387 ## BBPR_1608 putative transcriptional regulator - Prom 252326 - 252385 6.1 214 133 Op 1 . + CDS 252892 - 254130 1582 ## COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 215 133 Op 2 . + CDS 254178 - 254885 1044 ## COG0775 Nucleoside phosphorylase 216 134 Op 1 40/0.000 + CDS 255074 - 256429 1571 ## COG0642 Signal transduction histidine kinase 217 134 Op 2 . + CDS 256582 - 257286 1075 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 218 135 Op 1 39/0.000 + CDS 257533 - 258663 2017 ## COG0226 ABC-type phosphate transport system, periplasmic component 219 135 Op 2 38/0.000 + CDS 258792 - 259769 1421 ## COG0573 ABC-type phosphate transport system, permease component 220 135 Op 3 41/0.000 + CDS 259769 - 260812 1564 ## COG0581 ABC-type phosphate transport system, permease component 221 135 Op 4 . + CDS 260852 - 261631 181 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) + Term 261687 - 261727 6.0 - Term 261737 - 261775 -0.4 222 136 Op 1 . - CDS 261925 - 262827 224 ## BBPR_1599 hypothetical protein 223 136 Op 2 . - CDS 262838 - 262948 91 ## 224 137 Op 1 . + CDS 263053 - 264447 2199 ## COG2252 Permeases + Term 264471 - 264515 11.6 225 137 Op 2 . + CDS 264520 - 264819 299 ## BBPR_1597 hypothetical protein + Prom 264841 - 264900 2.3 226 137 Op 3 . + CDS 264980 - 270247 7219 ## COG5492 Bacterial surface proteins containing Ig-like domains + Term 270263 - 270314 19.0 227 138 Tu 1 . + CDS 270602 - 271606 871 ## BBPR_1595 hypothetical protein + Term 271629 - 271663 -0.6 + Prom 271702 - 271761 1.9 228 139 Op 1 47/0.000 + CDS 271814 - 272335 852 ## PROTEIN SUPPORTED gi|224283678|ref|ZP_03647000.1| 50S ribosomal protein L10 229 139 Op 2 . + CDS 272435 - 272818 605 ## PROTEIN SUPPORTED gi|224283679|ref|ZP_03647001.1| 50S ribosomal protein L7/L12 + Term 272903 - 272942 0.4 + Prom 272936 - 272995 1.8 230 140 Op 1 . + CDS 273111 - 274766 1496 ## BBPR_1592 hypothetical protein 231 140 Op 2 . + CDS 274775 - 278392 3762 ## BBPR_1591 DNA and RNA helicase-like protein 232 140 Op 3 . + CDS 278389 - 278643 175 ## BBIF_1531 hypothetical protein - Term 278628 - 278660 0.1 233 141 Tu 1 . - CDS 278745 - 279347 335 ## BBPR_1589 hypothetical protein - Prom 279378 - 279437 2.0 - Term 279383 - 279418 5.1 234 142 Op 1 3/0.000 - CDS 279556 - 279774 359 ## COG2331 Uncharacterized protein conserved in bacteria 235 142 Op 2 . - CDS 279904 - 280596 561 ## COG0212 5-formyltetrahydrofolate cyclo-ligase 236 143 Op 1 . + CDS 280619 - 281353 393 ## PROTEIN SUPPORTED gi|227385132|ref|ZP_03868523.1| acetyltransferase, ribosomal protein N-acetylase 237 143 Op 2 . + CDS 281378 - 282733 1146 ## BBIF_1526 hypothetical protein + Prom 282748 - 282807 1.6 238 144 Tu 1 . + CDS 282909 - 283202 517 ## COG0234 Co-chaperonin GroES (HSP10) + Term 283237 - 283275 3.1 + Prom 283246 - 283305 3.2 239 145 Tu 1 . + CDS 283399 - 284157 925 ## COG2367 Beta-lactamase class A - Term 283898 - 283950 2.1 240 146 Tu 1 . - CDS 284095 - 284292 78 ## 241 147 Op 1 . + CDS 284267 - 284560 244 ## COG0714 MoxR-like ATPases 242 147 Op 2 . + CDS 284560 - 285042 93 ## gi|224283691|ref|ZP_03647013.1| hypothetical protein BbifN4_07667 + TRNA 285084 - 285165 59.2 # Tyr GTA 0 0 + TRNA 285167 - 285238 74.5 # Thr GGT 0 0 + TRNA 285243 - 285319 80.9 # Met CAT 0 0 + Prom 285086 - 285145 80.3 243 148 Op 1 . + CDS 285365 - 285535 303 ## PROTEIN SUPPORTED gi|224283692|ref|ZP_03647014.1| 50S ribosomal protein L33 + Term 285554 - 285602 11.2 244 148 Op 2 . + CDS 285654 - 286868 1360 ## COG0812 UDP-N-acetylmuramate dehydrogenase + Term 286878 - 286917 5.7 245 149 Op 1 4/0.000 + CDS 286993 - 287316 437 ## COG1146 Ferredoxin + Term 287338 - 287374 6.1 246 149 Op 2 . + CDS 287435 - 288613 1210 ## COG0436 Aspartate/tyrosine/aromatic aminotransferase 247 150 Tu 1 . - CDS 288637 - 289929 1118 ## COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair + TRNA 290226 - 290316 55.1 # Ser GCT 0 0 + Prom 290228 - 290287 80.3 248 151 Op 1 . + CDS 290512 - 290679 104 ## + Term 290706 - 290749 3.0 + Prom 290764 - 290823 2.1 249 151 Op 2 . + CDS 290853 - 292196 1800 ## COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 250 151 Op 3 . + CDS 292180 - 292818 465 ## COG1739 Uncharacterized conserved protein 251 151 Op 4 . + CDS 292909 - 293643 767 ## BBIF_1515 hypothetical protein with leucine rich repeat 252 152 Tu 1 . + CDS 293816 - 295984 2793 ## COG1640 4-alpha-glucanotransferase + Prom 296036 - 296095 3.8 253 153 Op 1 59/0.000 + CDS 296247 - 296696 767 ## PROTEIN SUPPORTED gi|224283701|ref|ZP_03647023.1| 50S ribosomal protein L13 254 153 Op 2 . + CDS 296718 - 297209 813 ## PROTEIN SUPPORTED gi|224283702|ref|ZP_03647024.1| 30S ribosomal protein S9 + Term 297232 - 297283 18.0 255 154 Op 1 . - CDS 297288 - 299873 3204 ## COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases 256 154 Op 2 . - CDS 299870 - 301087 1339 ## COG1940 Transcriptional regulator/sugar kinase - Prom 301145 - 301204 9.4 + Prom 301109 - 301168 5.2 257 155 Op 1 . + CDS 301206 - 301322 87 ## 258 155 Op 2 . + CDS 301498 - 304230 4184 ## COG1012 NAD-dependent aldehyde dehydrogenases + Term 304261 - 304328 11.8 259 156 Op 1 . - CDS 304424 - 305278 866 ## COG3527 Alpha-acetolactate decarboxylase 260 156 Op 2 . - CDS 305329 - 306249 542 ## BBIF_1506 hypothetical protein, containing bacterial Ig-like domain (group 3) - Prom 306345 - 306404 2.3 + Prom 306665 - 306724 4.2 261 157 Op 1 40/0.000 + CDS 306917 - 307225 520 ## PROTEIN SUPPORTED gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 262 157 Op 2 58/0.000 + CDS 307242 - 307895 1116 ## PROTEIN SUPPORTED gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 263 157 Op 3 61/0.000 + CDS 307901 - 308566 1140 ## PROTEIN SUPPORTED gi|224283710|ref|ZP_03647032.1| 50S ribosomal protein L4 264 157 Op 4 61/0.000 + CDS 308569 - 308865 487 ## PROTEIN SUPPORTED gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 265 157 Op 5 60/0.000 + CDS 308902 - 309732 1458 ## PROTEIN SUPPORTED gi|224283712|ref|ZP_03647034.1| 50S ribosomal protein L2 266 157 Op 6 59/0.000 + CDS 309748 - 310026 490 ## PROTEIN SUPPORTED gi|23336505|ref|ZP_00121719.1| COG0185: Ribosomal protein S19 267 157 Op 7 61/0.000 + CDS 310042 - 310401 580 ## PROTEIN SUPPORTED gi|224283714|ref|ZP_03647036.1| 50S ribosomal protein L22 268 157 Op 8 50/0.000 + CDS 310403 - 311221 1368 ## PROTEIN SUPPORTED gi|224283715|ref|ZP_03647037.1| 30S ribosomal protein S3 269 157 Op 9 50/0.000 + CDS 311226 - 311645 731 ## PROTEIN SUPPORTED gi|224283716|ref|ZP_03647038.1| 50S ribosomal protein L16 270 157 Op 10 50/0.000 + CDS 311645 - 311902 421 ## PROTEIN SUPPORTED gi|224283717|ref|ZP_03647039.1| 50S ribosomal protein L29 271 157 Op 11 50/0.000 + CDS 311905 - 312171 448 ## PROTEIN SUPPORTED gi|224283718|ref|ZP_03647040.1| ribosomal protein S17 272 157 Op 12 57/0.000 + CDS 312264 - 312632 602 ## PROTEIN SUPPORTED gi|224283719|ref|ZP_03647041.1| 50S ribosomal protein L14 273 157 Op 13 48/0.000 + CDS 312634 - 312969 545 ## PROTEIN SUPPORTED gi|224283720|ref|ZP_03647042.1| ribosomal protein L24 274 157 Op 14 50/0.000 + CDS 312966 - 313538 971 ## PROTEIN SUPPORTED gi|224283721|ref|ZP_03647043.1| 50S ribosomal protein L5 275 157 Op 15 50/0.000 + CDS 313540 - 313725 333 ## PROTEIN SUPPORTED gi|23336514|ref|ZP_00121728.1| COG0199: Ribosomal protein S14 276 157 Op 16 55/0.000 + CDS 313815 - 314213 671 ## PROTEIN SUPPORTED gi|224283723|ref|ZP_03647045.1| 30S ribosomal protein S8 277 157 Op 17 46/0.000 + CDS 314231 - 314770 903 ## PROTEIN SUPPORTED gi|224283724|ref|ZP_03647046.1| 50S ribosomal protein L6 278 157 Op 18 56/0.000 + CDS 314772 - 315143 603 ## PROTEIN SUPPORTED gi|224283725|ref|ZP_03647047.1| 50S ribosomal protein L18 279 157 Op 19 50/0.000 + CDS 315140 - 315874 1220 ## PROTEIN SUPPORTED gi|224283726|ref|ZP_03647048.1| 30S ribosomal protein S5 280 157 Op 20 48/0.000 + CDS 315874 - 316056 296 ## PROTEIN SUPPORTED gi|224283727|ref|ZP_03647049.1| ribosomal protein L30 281 157 Op 21 53/0.000 + CDS 316059 - 316514 767 ## PROTEIN SUPPORTED gi|224283728|ref|ZP_03647050.1| 50S ribosomal protein L15 + Term 316550 - 316599 13.3 282 158 Op 1 28/0.000 + CDS 316717 - 318051 838 ## PROTEIN SUPPORTED gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 283 158 Op 2 6/0.000 + CDS 318119 - 318682 1003 ## COG0563 Adenylate kinase and related kinases + Term 318732 - 318788 20.1 284 159 Op 1 2/0.034 + CDS 318794 - 319066 285 ## PROTEIN SUPPORTED gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 285 159 Op 2 . + CDS 319090 - 319203 201 ## PROTEIN SUPPORTED gi|183601967|ref|ZP_02963336.1| hypothetical protein BIFLAC_06796 286 160 Op 1 48/0.000 + CDS 319336 - 319713 637 ## PROTEIN SUPPORTED gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 287 160 Op 2 32/0.000 + CDS 319802 - 320200 669 ## PROTEIN SUPPORTED gi|224283734|ref|ZP_03647056.1| 30S ribosomal protein S11 288 160 Op 3 50/0.000 + CDS 320281 - 321276 1303 ## COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit 289 160 Op 4 . + CDS 321363 - 321875 735 ## PROTEIN SUPPORTED gi|224283736|ref|ZP_03647058.1| ribosomal protein L17 + Term 321895 - 321946 15.6 - Term 322187 - 322228 13.2 290 161 Op 1 . - CDS 322275 - 327158 7540 ## COG3525 N-acetyl-beta-hexosaminidase 291 161 Op 2 . - CDS 327149 - 327394 64 ## 292 162 Tu 1 . + CDS 327370 - 328272 1187 ## COG0101 Pseudouridylate synthase 293 163 Op 1 7/0.000 + CDS 328458 - 330641 2921 ## COG2308 Uncharacterized conserved protein + Term 330673 - 330717 0.5 + Prom 330666 - 330725 2.0 294 163 Op 2 . + CDS 330763 - 331563 1022 ## COG1305 Transglutaminase-like enzymes, putative cysteine proteases + TRNA 331904 - 331991 65.6 # Ser CGA 0 0 - Term 331984 - 332025 13.1 295 164 Tu 1 . - CDS 332075 - 332272 228 ## BBPR_1525 transposase 296 165 Tu 1 . - CDS 333171 - 334145 841 ## BBIF_1471 hypothetical protein + Prom 334106 - 334165 3.0 297 166 Op 1 20/0.000 + CDS 334220 - 335248 552 ## PROTEIN SUPPORTED gi|17988250|ref|NP_540884.1| transcription elongation factor NusA 298 166 Op 2 32/0.000 + CDS 335458 - 338424 3136 ## COG0532 Translation initiation factor 2 (IF-2; GTPase) + Term 338444 - 338481 5.1 299 166 Op 3 26/0.000 + CDS 338726 - 339310 837 ## COG0858 Ribosome-binding factor A 300 166 Op 4 12/0.000 + CDS 339353 - 340645 1010 ## COG0130 Pseudouridine synthase + Prom 340668 - 340727 1.6 301 166 Op 5 . + CDS 340925 - 342184 1274 ## COG0196 FAD synthase 302 167 Tu 1 . - CDS 342326 - 343726 1552 ## COG1066 Predicted ATP-dependent serine protease 303 168 Tu 1 . + CDS 343812 - 344441 824 ## BBIF_1464 hypothetical protein + Prom 344472 - 344531 2.9 304 169 Tu 1 . + CDS 344566 - 344655 165 ## + Term 344683 - 344722 6.1 - Term 344671 - 344709 9.7 305 170 Op 1 . - CDS 344823 - 345521 1215 ## COG0120 Ribose 5-phosphate isomerase 306 170 Op 2 . - CDS 345671 - 346750 974 ## COG0328 Ribonuclease HI - Prom 346829 - 346888 4.3 + Prom 346795 - 346854 6.6 307 171 Tu 1 . + CDS 346981 - 352863 9501 ## BBPR_1514 hyaluronidase (EC:3.2.1.35) + Term 352891 - 352935 13.5 - Term 352626 - 352656 -1.0 308 172 Tu 1 . - CDS 352796 - 354400 421 ## PROTEIN SUPPORTED gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 - Prom 354564 - 354623 2.5 309 173 Op 1 . - CDS 354781 - 356457 2560 ## COG0033 Phosphoglucomutase 310 173 Op 2 . - CDS 356462 - 356569 64 ## - Prom 356773 - 356832 2.9 311 174 Tu 1 . - CDS 357230 - 357553 286 ## BBPR_1511 hypothetical protein 312 175 Tu 1 . + CDS 357447 - 357686 191 ## gi|224283757|ref|ZP_03647079.1| hypothetical protein BbifN4_07997 313 176 Tu 1 . + CDS 357794 - 358405 634 ## BBIF_1456 protease 314 177 Op 1 7/0.000 + CDS 359001 - 361079 2729 ## COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 315 177 Op 2 . + CDS 361130 - 361975 1095 ## COG3711 Transcriptional antiterminator + Term 361989 - 362044 14.7 - Term 361977 - 362033 20.0 316 178 Op 1 . - CDS 362057 - 363187 1338 ## COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase - Term 363436 - 363491 19.5 317 178 Op 2 . - CDS 363519 - 368312 7047 ## COG2374 Predicted extracellular nuclease 318 179 Tu 1 . + CDS 368558 - 369844 1997 ## COG0172 Seryl-tRNA synthetase + Term 369865 - 369904 5.5 + TRNA 369931 - 370015 60.9 # Ser TGA 0 0 - Term 369919 - 369985 31.6 319 180 Tu 1 . - CDS 370108 - 370356 87 ## - Prom 370387 - 370446 2.1 320 181 Tu 1 . + CDS 370447 - 376320 7856 ## BBPR_1503 beta-N-hexosaminidase (EC:3.2.1.50) 321 182 Tu 1 . + CDS 376540 - 377040 503 ## BBIF_1449 hypothetical protein 322 183 Tu 1 . + CDS 377184 - 377708 491 ## BBIF_1448 hypothetical protein 323 184 Tu 1 . - CDS 377797 - 377961 175 ## + Prom 377859 - 377918 2.2 324 185 Op 1 5/0.000 + CDS 377945 - 379531 1900 ## COG0364 Glucose-6-phosphate 1-dehydrogenase 325 185 Op 2 4/0.000 + CDS 379528 - 380517 983 ## COG3429 Glucose-6-P dehydrogenase subunit 326 185 Op 3 . + CDS 380686 - 381474 1005 ## COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase + Term 381483 - 381523 0.4 + Prom 381559 - 381618 1.9 327 186 Tu 1 . + CDS 381664 - 382215 -96 ## BBIF_1444 hypothetical protein + Term 382295 - 382328 4.0 - Term 382146 - 382195 14.0 328 187 Op 1 . - CDS 382331 - 383779 1824 ## COG0362 6-phosphogluconate dehydrogenase 329 187 Op 2 19/0.000 - CDS 383901 - 384713 827 ## COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 330 187 Op 3 . - CDS 384731 - 386176 1132 ## COG4585 Signal transduction histidine kinase 331 188 Op 1 . + CDS 386254 - 388005 1230 ## BBIF_1440 hypothetical protein containing PspC domain 332 188 Op 2 . + CDS 388038 - 388991 793 ## BBPR_1493 hypothetical protein - Term 388984 - 389040 20.1 333 189 Op 1 . - CDS 389046 - 389657 617 ## BBIF_1438 hypothetical protein 334 189 Op 2 . - CDS 389726 - 391801 2307 ## COG0457 FOG: TPR repeat 335 190 Tu 1 . + CDS 391853 - 391924 62 ## 336 191 Tu 1 . - CDS 391980 - 393146 1576 ## COG2814 Arabinose efflux permease - TRNA 393328 - 393404 80.2 # Pro CGG 0 0 + Prom 393374 - 393433 3.0 337 192 Tu 1 . + CDS 393534 - 395225 2825 ## COG1190 Lysyl-tRNA synthetase (class II) + Term 395290 - 395337 18.5 338 193 Op 1 . + CDS 395443 - 396408 1115 ## COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase 339 193 Op 2 . + CDS 396486 - 397226 1208 ## COG0588 Phosphoglycerate mutase 1 340 193 Op 3 . + CDS 397270 - 397539 292 ## BBIF_1432 hypothetical protein + Term 397585 - 397622 -0.7 - Term 397647 - 397691 11.6 341 194 Tu 1 . - CDS 397760 - 398440 951 ## COG0704 Phosphate uptake regulator 342 195 Tu 1 . + CDS 398624 - 399892 1131 ## COG0642 Signal transduction histidine kinase 343 196 Tu 1 . - CDS 399899 - 400153 484 ## BBIF_1429 hypothetical protein 344 197 Tu 1 . - CDS 400264 - 401406 1486 ## COG1932 Phosphoserine aminotransferase - Prom 401561 - 401620 1.7 + Prom 401449 - 401508 3.0 345 198 Op 1 . + CDS 401571 - 402593 1093 ## COG3942 Surface antigen 346 198 Op 2 . + CDS 402744 - 403550 765 ## COG0791 Cell wall-associated hydrolases (invasion-associated proteins) + Term 403591 - 403638 10.2 + Prom 403724 - 403783 1.6 347 199 Tu 1 . + CDS 403830 - 404870 1358 ## COG0589 Universal stress protein UspA and related nucleotide-binding proteins + Term 404884 - 404940 14.1 - Term 404958 - 404998 2.9 348 200 Tu 1 . - CDS 405014 - 405427 536 ## COG1765 Predicted redox protein, regulator of disulfide bond formation 349 201 Op 1 16/0.000 + CDS 405983 - 406753 1005 ## COG0207 Thymidylate synthase 350 201 Op 2 . + CDS 406801 - 407460 864 ## COG0262 Dihydrofolate reductase 351 201 Op 3 . + CDS 407530 - 408048 622 ## COG0394 Protein-tyrosine-phosphatase + Term 408218 - 408245 1.5 352 202 Tu 1 . + CDS 408275 - 409330 1179 ## COG0673 Predicted dehydrogenases and related proteins 353 203 Tu 1 . - CDS 409400 - 409648 380 ## COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance) - Prom 409817 - 409876 2.5 - Term 409830 - 409881 16.1 354 204 Op 1 36/0.000 - CDS 409940 - 410575 226 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 355 204 Op 2 10/0.000 - CDS 410588 - 411808 1138 ## COG0577 ABC-type antimicrobial peptide transport system, permease component 356 204 Op 3 . - CDS 411808 - 413175 1289 ## COG0577 ABC-type antimicrobial peptide transport system, permease component - Prom 413263 - 413322 1.8 - Term 413202 - 413234 1.6 357 205 Tu 1 . - CDS 413380 - 413661 181 ## BBIF_1415 hypothetical protein - Term 413721 - 413762 1.2 358 206 Op 1 . - CDS 413838 - 414920 1388 ## BBIF_1414 hypothetical protein 359 206 Op 2 . - CDS 414932 - 415534 219 ## PROTEIN SUPPORTED gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) 360 206 Op 3 . - CDS 415524 - 416210 745 ## BBIF_1412 hypothetical protein - Prom 416314 - 416373 80.3 361 207 Op 1 . - CDS 418775 - 419113 266 ## BBIF_1412 hypothetical protein 362 207 Op 2 . - CDS 419199 - 419861 715 ## BBIF_1411 hypothetical protein + Prom 419812 - 419871 1.9 363 208 Op 1 40/0.000 + CDS 420050 - 420706 353 ## COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 364 208 Op 2 1/0.121 + CDS 420703 - 421989 452 ## COG0642 Signal transduction histidine kinase 365 208 Op 3 . + CDS 422009 - 423175 1041 ## COG1609 Transcriptional regulators 366 209 Op 1 . - CDS 423166 - 423669 445 ## BBPR_1461 N-acetylglucosamine-6-phosphate deacetylase NagA2 (EC:3.5.1.25) 367 209 Op 2 . - CDS 423688 - 426846 3436 ## COG3250 Beta-galactosidase/beta-glucuronidase - Prom 426925 - 426984 3.5 + Prom 427061 - 427120 3.7 368 210 Tu 1 . + CDS 427212 - 428687 2160 ## COG2211 Na+/melibiose symporter and related transporters + Term 428796 - 428839 12.2 369 211 Tu 1 . - CDS 428865 - 429110 246 ## BBIF_1404 hypothetical protein 370 212 Tu 1 . + CDS 429449 - 429916 211 ## Blon_0536 hypothetical protein - TRNA 429860 - 429934 54.2 # Glu TTC 0 0 - Term 429808 - 429856 7.2 371 213 Tu 1 . - CDS 430002 - 430913 1118 ## COG0220 Predicted S-adenosylmethionine-dependent methyltransferase - Prom 430992 - 431051 5.3 + Prom 430889 - 430948 1.5 372 214 Op 1 . + CDS 430968 - 431042 63 ## 373 214 Op 2 . + CDS 431107 - 432120 1312 ## COG1087 UDP-glucose 4-epimerase + Term 432211 - 432250 -0.0 + Prom 432303 - 432362 3.4 374 215 Tu 1 . + CDS 432415 - 433122 706 ## BBPR_1455 hypothetical protein + Term 433357 - 433396 5.9 + TRNA 433275 - 433348 81.7 # Asp GTC 0 0 + TRNA 433393 - 433468 78.6 # Phe GAA 0 0 + Prom 433394 - 433453 78.1 375 216 Op 1 . + CDS 433542 - 433817 112 ## 376 216 Op 2 . + CDS 434034 - 434249 67 ## + Prom 434377 - 434436 2.0 377 217 Tu 1 . + CDS 434492 - 435643 1922 ## COG1454 Alcohol dehydrogenase, class IV + Term 435861 - 435908 4.4 - Term 435733 - 435789 19.8 378 218 Tu 1 . - CDS 435824 - 436723 1176 ## COG0463 Glycosyltransferases involved in cell wall biogenesis + Prom 436674 - 436733 1.8 379 219 Op 1 . + CDS 436777 - 438381 1470 ## COG0628 Predicted permease 380 219 Op 2 2/0.034 + CDS 438381 - 439604 1781 ## COG1215 Glycosyltransferases, probably involved in cell wall biogenesis 381 220 Op 1 . + CDS 439743 - 440672 1058 ## COG1131 ABC-type multidrug transport system, ATPase component 382 220 Op 2 . + CDS 440690 - 442327 1688 ## BBIF_1392 ABC-2 type transport system, permease protein 383 220 Op 3 2/0.034 + CDS 442386 - 443849 2000 ## COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 384 220 Op 4 10/0.000 + CDS 443862 - 444980 623 ## COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 385 220 Op 5 11/0.000 + CDS 444967 - 445524 550 ## COG0634 Hypoxanthine-guanine phosphoribosyltransferase 386 220 Op 6 4/0.000 + CDS 445531 - 447624 1202 ## PROTEIN SUPPORTED gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 + Term 447631 - 447691 12.8 387 221 Op 1 4/0.000 + CDS 447765 - 448331 728 ## COG0302 GTP cyclohydrolase I 388 221 Op 2 5/0.000 + CDS 448397 - 449269 1045 ## COG0294 Dihydropteroate synthase and related enzymes 389 221 Op 3 . + CDS 449352 - 450866 873 ## COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 390 221 Op 4 . + CDS 450863 - 451402 749 ## BBIF_1384 hypothetical protein + Term 451592 - 451627 1.5 391 222 Tu 1 . - CDS 451909 - 452814 959 ## COG1946 Acyl-CoA thioesterase - Prom 452849 - 452908 2.9 + Prom 453117 - 453176 1.6 392 223 Tu 1 . + CDS 453197 - 456523 4656 ## COG3525 N-acetyl-beta-hexosaminidase + Term 456554 - 456603 14.1 - Term 456668 - 456709 7.2 393 224 Op 1 . - CDS 456725 - 458404 2793 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains 394 224 Op 2 . - CDS 458380 - 458559 56 ## 395 225 Op 1 . + CDS 458887 - 459321 139 ## BBIF_1379 hypothetical protein 396 225 Op 2 . + CDS 459312 - 460259 872 ## BBIF_1379 hypothetical protein + Term 460311 - 460355 11.2 397 226 Op 1 . - CDS 460410 - 461087 878 ## BBIF_1378 hypothetical protein - Term 461103 - 461135 5.7 398 226 Op 2 . - CDS 461178 - 461477 157 ## - Prom 461610 - 461669 80.3 399 227 Op 1 3/0.000 - CDS 461966 - 462613 973 ## COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) 400 227 Op 2 . - CDS 462654 - 462926 402 ## COG3817 Predicted membrane protein 401 228 Tu 1 . - CDS 463102 - 463293 136 ## gi|313140994|ref|ZP_07803187.1| predicted protein 402 229 Tu 1 . + CDS 463320 - 463730 232 ## COG1434 Uncharacterized conserved protein + Term 463731 - 463763 3.0 + TRNA 463835 - 463908 81.7 # Asp GTC 0 0 + Prom 463837 - 463896 80.3 403 230 Tu 1 . + CDS 464027 - 464650 631 ## COG3467 Predicted flavin-nucleotide-binding protein 404 231 Tu 1 . - CDS 464927 - 465769 818 ## COG0657 Esterase/lipase - Prom 465827 - 465886 1.6 405 232 Tu 1 . + CDS 466064 - 466411 488 ## COG0477 Permeases of the major facilitator superfamily 406 233 Tu 1 . - CDS 466397 - 467989 1176 ## COG0488 ATPase components of ABC transporters with duplicated ATPase domains - Term 468036 - 468075 4.3 407 234 Tu 1 . - CDS 468166 - 468375 63 ## + Prom 468289 - 468348 2.8 408 235 Tu 1 . + CDS 468374 - 468562 79 ## 409 236 Tu 1 . - CDS 468987 - 469937 395 ## PROTEIN SUPPORTED gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 410 237 Tu 1 . - CDS 470105 - 470323 106 ## gi|313141002|ref|ZP_07803195.1| predicted protein 411 238 Op 1 3/0.000 + CDS 470314 - 470793 447 ## COG0477 Permeases of the major facilitator superfamily 412 238 Op 2 . + CDS 470717 - 471034 329 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 413 239 Tu 1 . - CDS 471139 - 472416 1778 ## COG2873 O-acetylhomoserine sulfhydrylase 414 240 Op 1 . + CDS 472556 - 473695 1118 ## BBPR_1410 hypothetical protein 415 240 Op 2 . + CDS 473751 - 473942 185 ## BLLJ_1311 transposase - Term 473681 - 473715 5.4 416 241 Op 1 . - CDS 473939 - 474217 176 ## 417 241 Op 2 . - CDS 474124 - 474297 58 ## + Prom 473997 - 474056 2.2 418 242 Tu 1 . + CDS 474300 - 475181 939 ## COG0730 Predicted permeases 419 243 Tu 1 . + CDS 475306 - 476178 1050 ## COG0577 ABC-type antimicrobial peptide transport system, permease component + Term 476234 - 476275 -0.8 420 244 Tu 1 . + CDS 476320 - 476418 84 ## 421 245 Tu 1 . - CDS 476614 - 477528 1169 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily + Prom 477547 - 477606 2.8 422 246 Tu 1 . + CDS 477774 - 479768 2360 ## COG0513 Superfamily II DNA and RNA helicases + Term 479834 - 479874 2.2 + Prom 479886 - 479945 3.2 423 247 Tu 1 . + CDS 479974 - 481086 1025 ## BBIF_1359 beta-lactamase class A - Term 480872 - 480909 3.1 424 248 Tu 1 . - CDS 481153 - 482019 1067 ## COG0676 Uncharacterized enzymes related to aldose 1-epimerase - Prom 482072 - 482131 4.0 + Prom 482066 - 482125 6.9 425 249 Tu 1 . + CDS 482210 - 482722 202 ## PROTEIN SUPPORTED gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase + Term 482862 - 482907 9.0 + Prom 482847 - 482906 4.0 426 250 Tu 1 . + CDS 483122 - 483820 942 ## BBPR_1402 hypothetical protein + Term 483886 - 483923 5.1 - Term 483834 - 483866 2.1 427 251 Tu 1 . - CDS 483936 - 484235 134 ## 428 252 Tu 1 . + CDS 484087 - 485391 1920 ## COG2230 Cyclopropane fatty acid synthase and related methyltransferases 429 253 Op 1 . - CDS 485412 - 486437 1343 ## COG0673 Predicted dehydrogenases and related proteins 430 253 Op 2 . - CDS 486505 - 487392 1414 ## COG4975 Putative glucose uptake permease - Prom 487599 - 487658 5.7 - Term 487610 - 487673 0.5 431 253 Op 3 . - CDS 487692 - 488735 1348 ## COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - Prom 488890 - 488949 77.6 + TRNA 488875 - 488948 82.4 # Met CAT 0 0 + Prom 488875 - 488934 77.5 432 254 Op 1 10/0.000 + CDS 489050 - 489262 390 ## PROTEIN SUPPORTED gi|224283864|ref|ZP_03647186.1| 50S ribosomal protein L31 433 254 Op 2 32/0.000 + CDS 489408 - 490496 1539 ## COG0216 Protein chain release factor A 434 254 Op 3 . + CDS 490761 - 491750 186 ## PROTEIN SUPPORTED gi|153001286|ref|YP_001366967.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 435 255 Tu 1 . - CDS 491693 - 492049 216 ## COG0110 Acetyltransferase (isoleucine patch superfamily) + Prom 492223 - 492282 3.3 436 256 Op 1 4/0.000 + CDS 492354 - 493013 587 ## COG0009 Putative translation factor (SUA5) 437 256 Op 2 . + CDS 493010 - 494191 1411 ## COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 438 256 Op 3 . + CDS 494261 - 495805 2347 ## COG0516 IMP dehydrogenase/GMP reductase + Term 495853 - 495903 15.0 - Term 495839 - 495893 17.5 439 257 Tu 1 . - CDS 495959 - 497749 2331 ## COG0366 Glycosidases 440 258 Op 1 . + CDS 498222 - 498521 178 ## BBIF_1344 sensor histidine kinase/phosphatase of two-component system 441 258 Op 2 . + CDS 498591 - 499241 842 ## COG1949 Oligoribonuclease (3'->5' exoribonuclease) 442 258 Op 3 . + CDS 499298 - 500149 1123 ## COG0561 Predicted hydrolases of the HAD superfamily 443 258 Op 4 . + CDS 500221 - 501633 1480 ## COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 444 259 Tu 1 . - CDS 501732 - 501845 71 ## 445 260 Tu 1 . - CDS 501970 - 502377 78 ## BBIF_1340 hypothetical protein 446 261 Tu 1 . + CDS 502606 - 504426 2638 ## COG0442 Prolyl-tRNA synthetase + Term 504450 - 504497 10.3 447 262 Tu 1 . - CDS 504254 - 505042 76 ## BBPR_1381 hypothetical protein - Prom 505141 - 505200 1.6 448 263 Tu 1 . + CDS 505362 - 506027 551 ## COG0629 Single-stranded DNA-binding protein - Term 505892 - 505937 -1.0 449 264 Tu 1 . - CDS 506076 - 508157 3219 ## COG3590 Predicted metalloendopeptidase - Prom 508284 - 508343 1.5 450 265 Op 1 . + CDS 508296 - 509291 944 ## COG3247 Uncharacterized conserved protein 451 265 Op 2 . + CDS 509316 - 510092 1204 ## COG0024 Methionine aminopeptidase + Term 510141 - 510194 14.2 452 266 Tu 1 . + CDS 510303 - 511595 1707 ## COG0372 Citrate synthase + Term 511704 - 511736 1.4 453 267 Tu 1 . - CDS 511693 - 512235 789 ## COG2176 DNA polymerase III, alpha subunit (gram-positive type) - Term 512353 - 512384 5.5 454 268 Tu 1 . - CDS 512575 - 513582 1362 ## COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 455 269 Tu 1 . + CDS 513725 - 514054 262 ## BBIF_1330 hypothetical protein - Term 513972 - 514024 1.6 456 270 Tu 1 . - CDS 514094 - 516508 3272 ## COG0474 Cation transport ATPase - Prom 516559 - 516618 2.1 457 271 Op 1 . + CDS 516653 - 519571 4151 ## COG1136 ABC-type antimicrobial peptide transport system, ATPase component 458 271 Op 2 . + CDS 519588 - 520832 943 ## COG1929 Glycerate kinase - Term 520632 - 520683 2.2 459 272 Op 1 . - CDS 520915 - 522303 1726 ## COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases 460 272 Op 2 . - CDS 522353 - 522583 101 ## + Prom 522552 - 522611 3.2 461 273 Tu 1 . + CDS 522714 - 523943 1480 ## COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases + Term 523974 - 524031 13.3 462 274 Tu 1 . + CDS 524088 - 525383 1235 ## COG2873 O-acetylhomoserine sulfhydrylase + Prom 525441 - 525500 1.6 463 275 Tu 1 . + CDS 525548 - 526465 1278 ## COG0330 Membrane protease subunits, stomatin/prohibitin homologs + Term 526487 - 526517 2.6 464 276 Tu 1 . - CDS 526770 - 528215 1280 ## COG1012 NAD-dependent aldehyde dehydrogenases - Prom 528360 - 528419 1.7 + Prom 528364 - 528423 2.0 465 277 Tu 1 . + CDS 528481 - 528846 442 ## COG1950 Predicted membrane protein 466 278 Tu 1 . + CDS 529387 - 532713 4721 ## COG0060 Isoleucyl-tRNA synthetase + Term 532774 - 532812 9.1 467 279 Op 1 . + CDS 532855 - 533025 194 ## BBIF_1318 hypothetical protein 468 279 Op 2 . + CDS 533221 - 537684 5799 ## COG3669 Alpha-L-fucosidase + Term 537705 - 537760 20.3 469 280 Tu 1 . + CDS 537792 - 538064 173 ## BBIF_1316 hypothetical protein + Term 538065 - 538119 19.1 - Term 538053 - 538107 19.1 470 281 Op 1 . - CDS 538129 - 539142 1042 ## COG1609 Transcriptional regulators - Prom 539181 - 539240 1.6 471 281 Op 2 . - CDS 539269 - 539472 144 ## + Prom 539202 - 539261 2.9 472 282 Tu 1 . + CDS 539369 - 540058 1026 ## BBIF_1314 sugar ABC transporter permease + Term 540179 - 540243 7.1 473 283 Op 1 . + CDS 540298 - 542367 2701 ## COG1874 Beta-galactosidase 474 283 Op 2 . + CDS 542632 - 543015 389 ## BBIF_1312 MalE-type ABC sugar transport system periplasmic component + Term 543038 - 543087 16.3 + Prom 543055 - 543114 2.5 475 284 Tu 1 . + CDS 543158 - 544579 1528 ## COG1653 ABC-type sugar transport system, periplasmic component - Term 544564 - 544614 3.1 476 285 Tu 1 . - CDS 544641 - 545411 1088 ## COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor - Prom 545561 - 545620 1.6 477 286 Op 1 38/0.000 + CDS 545590 - 547260 2596 ## COG0747 ABC-type dipeptide transport system, periplasmic component 478 286 Op 2 49/0.000 + CDS 547358 - 548335 1107 ## COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components + Term 548425 - 548478 1.4 479 286 Op 3 13/0.000 + CDS 548479 - 549306 885 ## COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 480 286 Op 4 1/0.121 + CDS 549303 - 550103 234 ## PROTEIN SUPPORTED gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 481 286 Op 5 . + CDS 550142 - 550960 392 ## PROTEIN SUPPORTED gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 + Term 551195 - 551244 9.2 482 287 Tu 1 . - CDS 550997 - 551998 1243 ## COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases - Prom 552084 - 552143 1.7 Predicted protein(s) >gi|197324944|gb|DS990230.1| GENE 1 44 - 295 321 83 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1746 NR:ns ## KEGG: BBIF_1746 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 83 1 83 83 147 100.0 1e-34 MHYFTPKRCSTSNKIMYHDKAQAQHAADQSLIERGAELWVYRCEYCGTWHLTHRDPAHEH TYVPLNQQIKPHSRKKGYKPRWR >gi|197324944|gb|DS990230.1| GENE 2 428 - 1207 976 259 aa, chain - ## HITS:1 COG:BS_ywcG KEGG:ns NR:ns ## COG: BS_ywcG COG0778 # Protein_GI_number: 16080862 # Func_class: C Energy production and conversion # Function: Nitroreductase # Organism: Bacillus subtilis # 4 239 2 232 249 134 32.0 2e-31 MVTNSTIETLLNRRSIRKFVAEPFDDDTVATLETVAQHAASSQYLNDWSAVRVKDPALKK RMSEIGRQPYIAEAPLLYVFVADEHRNAIIAESKGVSTDSDTYGLAGSYRFSQAQNDAVL ALHAMETAAYSLGLGCVILGSLLNDVPGLIEALHLPQYTYPVLGLAIGKPDQAPALKPRM PRELQFFDDVYPSDDDAIESIKERIGAFDVSVHEYYDLRNTDRPVDAFSDQIASIAAQRM DAAHQVIPNATSQGFRLDR >gi|197324944|gb|DS990230.1| GENE 3 1465 - 1881 430 138 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1744 NR:ns ## KEGG: BBIF_1744 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 138 1 138 138 232 100.0 3e-60 MTEFQDGPGNGGSGLDGSSTDRIIEGFARINEKVDAMRNQRLNDPDSLGDKAVKFALPSI AGFVAGKLFTLVWNKFVARKRPSDGTGELGDGVVDQQESLFMSILFAALSAAVGAAVSQL SDRGSKALVARRHRRQSD >gi|197324944|gb|DS990230.1| GENE 4 1966 - 2655 457 229 aa, chain + ## HITS:1 COG:mll2186 KEGG:ns NR:ns ## COG: mll2186 COG0406 # Protein_GI_number: 13472025 # Func_class: G Carbohydrate transport and metabolism # Function: Fructose-2,6-bisphosphatase # Organism: Mesorhizobium loti # 17 228 10 191 193 117 39.0 1e-26 MTQTTGGNAATAGRLVLLRHGQTVWSESGQHTGRTDIPLTAEGERQARDAGTRIQTAFPQ GFGENCVYASPLKRAQQTASLAGFAPRTLPALAEWDYGRAEGRTRQTIAQLHGGSWELWN DGPDALSPTMEGDWTETLPDGEQVPVHNGPGESLSDVYDRVQQAIDQAVPLMESGHSVLF VAHAHVLRILTARWLGVDPHFARLLRLDTAHYSILSVYKGDRVIERWNC >gi|197324944|gb|DS990230.1| GENE 5 2661 - 2837 158 58 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1742 NR:ns ## KEGG: BBIF_1742 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 58 1 58 58 92 98.0 4e-18 MYVGKKPSAGVDAEGNITLSSSNTPDGSYAAGAEGLTVINGKLASQVQQCGQELAAHR >gi|197324944|gb|DS990230.1| GENE 6 3016 - 4038 1288 340 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 6 334 7 326 332 117 27.0 4e-26 MDKAGIREVAKAAGVSISTVSRAFAHPEVVSEKTRHKVLQAADQLDFNISRSAAALKSGQ TFRVALLMNEEITSWFNTQIFAGINSIMHDAGYDISVFQHIDTADMRRKFFTDLPVRRNV DAVFVASFAIDEKEVEQLKRIRVPIIGINTPSIDGFDASISIDDENGMYTATQHLLNLGH KHIVYACSAASESMDSSIDARGRGFIRACENVEKRRELNWQVVTVPRGRAFADSALSALL ALDEFPDAICCQIDMMAIPLMLKLERYGHRTPRDYSIIGFDDSPYADTVNLTTMKQDPFK MGRSAAQKAIRLINGEEPEKPHEIVQPTLVLRESDALYTD >gi|197324944|gb|DS990230.1| GENE 7 4371 - 6503 3374 710 aa, chain + ## HITS:1 COG:BMEI0790 KEGG:ns NR:ns ## COG: BMEI0790 COG1785 # Protein_GI_number: 17987073 # Func_class: P Inorganic ion transport and metabolism # Function: Alkaline phosphatase # Organism: Brucella melitensis # 6 545 9 481 481 309 43.0 2e-83 MNINKMLKGAVAALTSAAALGALTAPAFAASGTYDLNGKGVDALSVHGGAQRIATIGNAK AKNVILFIGDGMGDSEITVARNYLHGVNGTFQGLDKIGQPGALQTSTGKAAESGVGQYTT FSLGGSSNDSLMAKDSKGQLTGSKTAGVITPVTDSSASGSGWATGTKTYNNAVSVDVKGN PQLNLIELAKANGLATGNVTTSEIQDATPAVQESHSSERACYGPQGKWDGTDKNGDGKVD IKDAELAGIGRCLADQLKANGGIGSISEQLLDTRADVTIGGGAKYFNQLDENGNTLWQQA ADRGFQTVKSGDVDGFKNLTYKDGQPVLALLGDGNLPTQFNPSVATKQDAAKDENPTVCT TNAKWLGNQGASLADFTDKALDLLQANPKSEKGFFLQVEGASIDKQDHNANACGQIGETD DLDKAISAALKKVDLSDTLIVVTADHAHTSQIVESQPYYALSTVLKNADGSKTTISYGTS EKNLYSDGQDTEGAADSSKAQGNMSHTGTQLRIAASGPGASRVDGLTDQTDNFYTIAGAL GLATDTTSQNNLSNGGKVTVNKDKDGKYSAAVTGFNGDAVLSYQLVDNASKKVVAESNTS TPLSGVRVATAATTSISFADFTPAEGASYTLTVNGRQSGKSASVSFPSASGSADKTPNGG NGSGTVAQGTVKEPTAPLGKTGATVLGLALMVLALGAGAMVVRSVKAGRR >gi|197324944|gb|DS990230.1| GENE 8 6882 - 8765 2820 627 aa, chain + ## HITS:1 COG:Rv0350 KEGG:ns NR:ns ## COG: Rv0350 COG0443 # Protein_GI_number: 15607491 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone # Organism: Mycobacterium tuberculosis H37Rv # 1 607 1 607 625 754 67.0 0 MARAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVT NVDRTISSVKRHMGTDWTVEIDGKKWTPQEISAQILMKLKRDAEAYLGEPVTDAVITCPA YFNDAQRQATKDAGKIAGLNVLRIINEPTAAALAYGLEKGKEDERILVFDLGGGTFDVSL LEIGKDDDGFSTIQVKATNGDNHLGGDDWDQKVIDWLVGEVKNKYGVDLSKDKIALQRLK EAAEQAKKELSSSTSTSINMQYLAMTPDGTPVHLDETLTRAHFEEMTSDLLGRCRTPFNN VLRDANISVSDIDHVVLVGGSTRMPAVKELVKELTGGKEANQSVNPDEVVAVGAAVQSGV IKGDRKDVLLIDVTPLSLGIETKGGIMTKLIDRNTAIPTKRSEVFSTAEDNQPSVLIQVY QGEREFARDNKPLGTFELTGIAPAPRGIPQIEVTFDIDANGIVHVSAKDKGTGKEQSMTI TGGSGLPKDEIDRMVKEAEAHEAEDKKRKEDAETRNQAEAFAYQTEKLVNDNKDKISDEI AKEVTDKVNALKEALKGEDIEKIKSAQSELMTSAQKIGEALYAQQGAAGAADAAGAAAGA SGAASNGGDDDVVDAEVVDDDDKKDNK >gi|197324944|gb|DS990230.1| GENE 9 8768 - 9472 940 234 aa, chain + ## HITS:1 COG:ML2495 KEGG:ns NR:ns ## COG: ML2495 COG0576 # Protein_GI_number: 15828349 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Molecular chaperone GrpE (heat shock protein) # Organism: Mycobacterium leprae # 78 229 35 188 229 86 37.0 5e-17 MSEFNKDDYLNDLPDADNLSATGQAGPSDGAAAGSAGKASDSAKSADASADKGAAGSAGD KASAEAGPSDKTGDSAAAGADDGAAADDSLTPLGKAKKEAADYLEALQRERAEFVNYRNR AQREQERFRQHGIIDVLTALLPALDDIDRIREHSEMDDSFKAVAAKIDKAFEKFGVEKFG EKGEEFDPTKHEAILHKPDAEAEKETVDTVVEAGYRIGDRVIRAARVVVASPQN >gi|197324944|gb|DS990230.1| GENE 10 9804 - 9956 113 50 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLSHSFSAIQVSFRVCVYVCRMLFFCCCVLAFVTAEVDMFAVTGAETTVM >gi|197324944|gb|DS990230.1| GENE 11 9931 - 10938 1360 335 aa, chain + ## HITS:1 COG:all1488 KEGG:ns NR:ns ## COG: all1488 COG2214 # Protein_GI_number: 17228981 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: DnaJ-class molecular chaperone # Organism: Nostoc sp. PCC 7120 # 9 306 9 284 315 168 39.0 1e-41 MAENEWLSKDFYKVLGVSKDATEDDITKAYRKLARKYHPDLNKTKEAEERFKDISEAYDV LSNKEQRQKYDAIRQFGMGGARFSGGSGQGGFDASGFSDIFGSMFGGNGGNVRFSTSGGG PSNLNDIFSMFGGAAGGRGGASYGGSRYGNPYEEPPTPQRGDDRKSKITLTFRQAVKGAT VSLRVDGKQFKTHIPAGVKDGQKIRIAGKGRPGSNGGANGDMYLTVQVKPDPRFTMRGHD IVMDVPVTVGEAVAGARVEAHDIDGETVTFKVPAGSSSGAEIRVSGKGVQSATAGDLIGC VQIRVPAKPGLGAKHAAKEFDKSVEGYAEAVAAER >gi|197324944|gb|DS990230.1| GENE 12 11032 - 11544 404 170 aa, chain + ## HITS:1 COG:Cgl2737 KEGG:ns NR:ns ## COG: Cgl2737 COG0789 # Protein_GI_number: 19553987 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 40 158 23 145 146 90 46.0 2e-18 MARIAQEVRRAYAACAAALVSGGVDLDAIDALGLNVEMPVFTVSQAAQIAGVHPQTLRQY DRLGLVVPQRTEGGARRYTLRDAARLAQAQQLSQDEGINLAGITHILSLQEENRQLRRQI RHLRRRLDGDSVFEAGMDGEVVEVRQSPFYHVRRRGRAYIAPLQITSGRE >gi|197324944|gb|DS990230.1| GENE 13 11560 - 11790 212 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MLFNLHWHSKIAVGYSIIAYIVNKMTYNCLQFRIIPPLPIQHPPKVPSDRNKTGRWRDTR RPHTTKVPSSGCQMGL >gi|197324944|gb|DS990230.1| GENE 14 11900 - 14404 2924 834 aa, chain + ## HITS:1 COG:Cgl1519 KEGG:ns NR:ns ## COG: Cgl1519 COG4409 # Protein_GI_number: 19552769 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Corynebacterium glutamicum # 188 517 75 391 399 280 49.0 9e-75 MVRSTKPSLLRRLGALVAAAAMLVVLPAGVSTASAASDDADMLTVTMTRTDALGDEVYVG DTLTYSFTNTNNTSSAFTAFPAESNLSGVLTTGTPNCRYENLAGGASYPCSTASHTITAD DLTAGSFTPRTVWKATSDRGGTQVLQDNIVSTGDTVTVKEGKRPDPATIPTDRADGEAVR LATARQNLGTECYRIPALAEAPNGWILAAFDQRPNTAMANGSGVKCWDAPQPNSIVQRIS KDGGKSWTPIQYVAQGKNAPERYGYSDPSYVVDEETGEIFLFFVHSYNKGFADSQLGVDE SNRNVLHAVVVSSKDNGETWSKPRDITADITKGYENEWKSRFATSGAGIQLKYGKYKGRL IQQYAVGRTTGSNAAVSVYSDDHGKTWQAGNPVTGMLMDENKVVELSDGRVMLNSRPGNG SGYRRVAISKDGGVNYGTVKNETQLPDPNNNAHITRAFPNAPEGSAKAKVLLYSSPRANN EGRANGVVRISLDDGTTWSSGKLYKAGSMAYSVITALSGAAGGGYGLLYEGAWVTGGGID SHDIMYTHISMDWLGYLSATADDVTASVEEGASTVDVTVPVSNIGSVDYTGVTVTPADLP TGWSASPVNVGALASGASKDVTVTVNVPATAKKDDVAKIVLRVTGTSAANADATTGFDGS ITVNVTEKSEPDPEPEPTITGVSAVTSQAGVKVGDVFDASKVSVTAAMSDGSSKALAAGE YSLSAVDADGKAVDLAEPFAAAGVVTVTVSVPVEGANPLTASFTIDVAEKSVDPEPKPEP KPEPEKPAGPKVDVPTEQPGLSKTGASTAGMSIVFVLLALSGVAALSLRRRSAH >gi|197324944|gb|DS990230.1| GENE 15 14677 - 20064 6296 1795 aa, chain + ## HITS:1 COG:Cgl1519 KEGG:ns NR:ns ## COG: Cgl1519 COG4409 # Protein_GI_number: 19552769 # Func_class: G Carbohydrate transport and metabolism # Function: Neuraminidase (sialidase) # Organism: Corynebacterium glutamicum # 289 642 41 391 399 283 48.0 3e-75 MTTIFRRATARTLMRKLSGLLVAIAMLAVLPAGTISANAADEPPQEYLQLTLTRTDSNGT PAEVGDKLTYSLGYKNVSDTGFIVHPTASNLNNVATPQSASNPNPMCRWGNLAAGASAAC TWSASKEFAYHVVTEDDVANGFTPTATVSATTQDGTNGVLQSVDITGETVPAVPATSTLR VAMQRTDTLGDNVKIGDRLTFNFTYTNKTAQKIYAYPSESNIERVDVVSYPRNSCRSGVE ANQTASCGFAYHVITAEDVVARRYTPTATFRATSDRDGTQVLQDDMTFTTGTVTVAGPAD DAASTPTERKDGEPLLLATNKQIGNTDYYRIPAIAQAPNGWILAAWDLRPSSAADAPNPN SIVQRISKDGGKSWETLAYVAQGRSATNKYGYSDPSYVVDEEAGKIFLFCVKSYDQGYFG SVLGVEDARNVLQAVVMESDDNGATWSEPRNITKDITKGHEDEWKSRFASSGHGIQLKYG QYKGRLIQQYAVRTTSNTNIAVSVYSDDHGKTWKAGNPVTEVNMDENKVVELSDGRVMLN SRPGAAGYRRVAISEDGGVNYGPIKSETQLPDPNNNAQITRAFPNAPEGSAKAKVLLYSA PRASNEGRANGVVRVSFDDGTTWSAGKLFKEGSMAYSVITALNDAAGGGYGLLYEGESIT YTRASMEWLGYLTATASGTATVKEGEGTLTAPVTVTNDGLTDYTNVNVTPTGLPSGWSAE AVNVGNLAAGQSATVNVPVTVPAAAVSGTVAKATMKITGKYAQSEDTLHSFAEGELAVTV TDPDPAAKRLKLTIERTDDNGDPVKVGDTLTYRITYENVGTQSFAVYPRESNLDGVTTPQ SASNPAPVCRWSRLAPGTTGACVSGNGKQLAYHTVTEADATAGSFTPSATIDATADASGE MVLESVSITGDPVTVSQPVELPADIAAWKTRNEALDDWQALSEKLAKTDRINWLFTGDSI THGVQFTRGYRTYSELFANHLDTASVRGVSRANDVVMNTGISSADASWPLKDGAFEKWVS DKHPDVVFLTFGMNDGRTGQAFTVDQYTANLSTLIDKIRDIGAIPVLQTQNYTTNTTFNA NLDTYFDAERRLALDKNVLLVDFNKQWLALGGGNRESGTYMGAGNDIHPGENGHIEWAKF TLGALNMIANDDPLARWSSSDTTLDKPTVTVDADGNGLKGSDGLEPAPAAAKSVGKFLSG AQYVDLGGDVVSAVAGKRESNVTIRFRASATGQPQTLFSLGDSDSATRATVRLSATGLVQ FLNSGNTGDFYTVGTNDLADGAWHTVSVNFVANGFTIYVDGAAMRAISGGTGTQLNVPGA ITVNTATAGAIRGADSAGGAQQLTGIVDYVAAWSRTLTGAEAKRISAETSAVAVTKVDAA VNALQPIISDTGARKNIVFVGGETIEGGYTDHLIAKNIVQLLDERVRWEYVTGLSATDRE RQRAKFFVAAGQGGLTAKQMDEDYAAMVGEYSPDILFLAPDLYDADGNLAESDAAAFAGH IRSVAAKAKEAGAKVVLVTPVTVRGGEDEYAGAMRTVAKEDDLPLIDAQAWIGKVVAADA SVKTAWFNKAGQLNYAGHLGYARFMMRSLDLYPSNVSGSRIASLPYDTANVTLVGASENG GELPVGRVEGTDRAHIDTMQIGAAASLVVADSYAVYEIGEDGGRTLVADGLKPADVLADG IDVTVNDTAAHRYEVVGSANVPEGADAVTVTYTATLAAVEEPEPGPDPDPTPDPSEKPDG DGTGDGTGAGTGDVQKPTPDAVAKTGADVFGLLAAVAVLLAAGSVTLSLRRRANR >gi|197324944|gb|DS990230.1| GENE 16 20366 - 21082 649 238 aa, chain + ## HITS:1 COG:Cgl1470 KEGG:ns NR:ns ## COG: Cgl1470 COG0637 # Protein_GI_number: 19552720 # Func_class: R General function prediction only # Function: Predicted phosphatase/phosphohexomutase # Organism: Corynebacterium glutamicum # 5 234 1 223 231 79 27.0 7e-15 MSDMLLKAVFWDLDGTLIDSEPYWHEGEMEIAAAHGGYWDEDLAWSCSGTPLDHCAKTMI EHGTNLPPEQIAKAMVDYVAKKEFERVPWTNGVLDVLGSLVDAGIPSVLVTTSPRRLAQN VIDHAPAGAFAGFVCGDDDLPHKPDPAPYLAAAKMLGIETGVAGADGAAALPGIARCVAL EDSATGIASAVASGATTIAQLGFNRNAKADGPQCASIDGFAGITAEALNAFIRQRLGS >gi|197324944|gb|DS990230.1| GENE 17 21579 - 22277 200 232 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|223039927|ref|ZP_03610210.1| ribosomal protein L22 [Campylobacter rectus RM3267] # 33 221 21 205 208 81 27 5e-14 MGFVHFIVNLLKDPRGAIASWIAMGTAPALGFIFLIVFIETGVVFFPFLPGDSLLFAAGF FAAQGDSGLPLMALLPIVWIAPILGDQSNYFIGHFFGRRIIASGKVKAMTPERLAKTEKM IEKWGPLAVFLGRFFPFIRTFMPFISGISGMRWSRFTPFSVLGGLCWSTLFTLLGFFFGN IPVVQKHFELVIVLILLVSLLPTIIGLLKAKFGKKPGTAANSSSVAAGTQNK >gi|197324944|gb|DS990230.1| GENE 18 22312 - 22548 152 78 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313139909|ref|ZP_07802102.1| ## NR: gi|313139909|ref|ZP_07802102.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 16 52 36 72 100 65 81.0 1e-09 MVPSIPHAKYLTATRCVPKCAPKRQVREHKNANDPVCVPKCARSSFQRALKNAKPPIRIA TCRISPATPPLVWFLEFS >gi|197324944|gb|DS990230.1| GENE 19 22547 - 23548 1216 333 aa, chain + ## HITS:1 COG:Cgl0866 KEGG:ns NR:ns ## COG: Cgl0866 COG0313 # Protein_GI_number: 19552116 # Func_class: R General function prediction only # Function: Predicted methyltransferases # Organism: Corynebacterium glutamicum # 41 332 8 280 282 205 42.0 1e-52 MDTVQDDSQVVLEGASPDATVPDATVPDATEPKAAPRTVMVPSGTVVLAATPIGNVGDAS DRLKALLADADIVAAEDTRRLYDLANRLGVHVNGTVIAYHDHNERAKADGLLDRVETGAT VLVVSDAGMPTINDPGLAIVRRAIERGLPVTCAPGPSAVLDALALSGLPTDRFCYEGFLP RKHSERVQHLRMLQSERRTIVFYETPHRIADSMDDLLDAFGPNRAMALCRELTKDYEEIR RGMVGTIRQGVVDNPPRGEMVLVIGGASDEEAEAAAPATLSIDDLAVLAIDRALEDGVRI KDAIAQVVAEHPLPDGSLPNRKQVYTAVLAMKS >gi|197324944|gb|DS990230.1| GENE 20 23550 - 23981 359 143 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1729 NR:ns ## KEGG: BBIF_1729 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 143 1 143 143 186 100.0 3e-46 MRMPSQEKTLQRLQNPAETLCERPRAGTARRRLRHSQARRAKRKSIPGRRMHALQRREQA TASRRSTRAAPPPPPLRLSPLLACDPATAPEVLWFIAEHEPELRRWLVANPSADAALLEY VAQAGGPGVNRALTILLDGLPAA >gi|197324944|gb|DS990230.1| GENE 21 24092 - 24922 669 276 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1728 NR:ns ## KEGG: BBIF_1728 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 276 1 276 276 530 100.0 1e-149 MNRILPSDIRYGVAPAPDQTDVAEAAKVGKPQPNATQPDTGPPSATRPTAAAPSKTQPGA TRPGTESAGTISRSDNAVAIVSDLIARGTMPRIDTTPLLTHKDLPGPLSMARLTHFGTLH SLDQTNAYSAEHADTLYGRAMIALKLIPFGTIACALTAAWVWLGGTFPRTVDVISSSHYR ADSHGRKIRVFNRKTAPEHVIQVGNLRITTPMRTACDIALLTPGELNEHDACDVLCALFE EYQVSLAQCMQTLDDNHFWPNTQPARELFTSMKHFF >gi|197324944|gb|DS990230.1| GENE 22 25072 - 26934 2722 620 aa, chain + ## HITS:1 COG:Cgl0868 KEGG:ns NR:ns ## COG: Cgl0868 COG0143 # Protein_GI_number: 19552118 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 3 587 4 597 610 742 61.0 0 MSHVLVNVAWPYANGPRHIGHVAGFGVPSDVYARYERMKGNDVLMVSGTDEHGTPILVEA EKEGLTAQELANRYNRVIAKDLCDLGLSYDLFTRTTTGNHEHVVQELFKQCLQNGYIYKG TQKVAISPSTGRTLPDRYIEGECPICHADGARGDQCDACGNELDPDELINPVSKINGETP RFEETEHFFLDLPALAEANLAWLKTRKGWRTNVINFSIGLFKEVKPRAITRDIDWGIPVP VAGWIDNPNKKLYVWFDAVIGYLSASIEWARRQGDPEKWREWWNDPSCPAYYFMGKDNIT FHSQIWPSEMLAYNGKGSKGGETGELGPLNLPEQVVASEFMTMEGKKFSSSRGIVIYVKD ILARYPVDAVRYYISIAGPETSDADFTWAEFVRHNNEELAASWGNLVNRVANLINKNFGE IPALDEDSMTNEDRALLKETSDAFDEIGALIEKHHQKNALVAAMRVVGDINKYISAEEPW KIKDDEARLGTVLHVAAQAVYDANHLLAPFLPHASQKVYEALGGSGVFSPLPRLEEVEDL DKPGFTYPIITGDYKLGETVHPWGSERLVAGTPVPKPHPIFAKIPPEAVAEELTRFDTEL AARKKAEAERFAAAQAELKQ >gi|197324944|gb|DS990230.1| GENE 23 27178 - 27708 366 176 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1785 NR:ns ## KEGG: BBPR_1785 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 176 1 179 179 308 97.0 7e-83 MAAIACVAMTGIMQVPAASAATGTGFTAGEQVDLTDVAPSGAKQSFAPAAESFSMAVSEQ AMRMRVMDGVLKALRMRINGVMEAGAAIPLAERRRQFPFTPMTTGTLLLTRDELMDVQQR INGLLDEYLRLSEQRRGSDYEYQVSYAWSLLPSNPAAVVGEDVDAGGSAEDDCDDR >gi|197324944|gb|DS990230.1| GENE 24 28474 - 28623 141 49 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1725 NR:ns ## KEGG: BBIF_1725 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 49 1 49 49 83 100.0 3e-15 MRTDFTYLSYTAYANSIAVDSIGQSYHGKLTLHEALQQWGESLKKYGEE >gi|197324944|gb|DS990230.1| GENE 25 28928 - 30382 1129 484 aa, chain + ## HITS:1 COG:L0023 KEGG:ns NR:ns ## COG: L0023 COG2211 # Protein_GI_number: 15673612 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Lactococcus lactis # 231 450 198 429 508 82 28.0 2e-15 MESDSAVSVIETGSSGQRTQQMLDHLADKVNGVILSTDAPGISFIRDYAKRVPLVVLNRP LEGVASVVPDPRIGTVRTEPAETLPSHRGHVRRRPGRVMGQSVEVAAVHDIGNRMGFKVN QIGPVHPTVEGGYQAALALEGGDTAAIITYNDLIAVGIVLRFTADGVNVPGDVSVIGFDN TLIAPVVMPPITSIRIPRAQLGQVAVHRLLLMMISPMILLGVFLWIPGMPFGIYVFACWR CTWEMTPETAGFGAHARGEKRDGHVGMAGWLRRARLVLREYASTLRVKEFRKHLAIYLLV QVTMDVFGQTFVFFVVYDWNHTAAFASLMPGCAAVSLPLMPVFGWAMTKIGPKRLYAINF IGWLGTAWLFAAWMLVGTLPEPWWTVFPYIADIDQIVTRRYRSATFSGIQASFRQLGSGI ATIAAGLVLGAVGFDATRARQTTVAGIGLGAVLLGWFTVLPSRWSSAGLCPPISPSTSVR TASY >gi|197324944|gb|DS990230.1| GENE 26 30316 - 30492 227 58 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1909 NR:ns ## KEGG: BLJ_1909 # Name: not_defined # Def: Na-galactoside symporter # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 57 467 523 528 77 59.0 2e-13 MVICWIVSAHLAINKRADGIVLTEITRLRNGGDKADVTPETRHVVERLTGLPYENCWR >gi|197324944|gb|DS990230.1| GENE 27 30558 - 31517 964 319 aa, chain + ## HITS:1 COG:Rv1008 KEGG:ns NR:ns ## COG: Rv1008 COG0084 # Protein_GI_number: 15608148 # Func_class: L Replication, recombination and repair # Function: Mg-dependent DNase # Organism: Mycobacterium tuberculosis H37Rv # 97 319 57 259 264 153 40.0 3e-37 MSKHHHRDRSWAPAPSPLPDDAHVIDNHTHVASVIPFARAMSHEAVEKGQPEVPVYDVEQ LLAQAAAVGVTGIIDCGCELPNLMTAIQMAVDHPDSVHAAIAIHPNEAVLHGHRGVPGPD GLSLKYKPHHDVSFDDALAEVHRLALAYPHQVVAIGETGMDLFRTGEGAKELQRDAFREH IALAKELNLPMQIHDRDSHREVIETLLADGSPERTVFHSYSGDAEMGEIARDNGWYLSFS GTVSYKGNDGIRESARLVGLDHIMVETDAPYLTPMPYRGRTNAPYMIPYTLTALADVFDL PVAEVARATRRTTRTVYGV >gi|197324944|gb|DS990230.1| GENE 28 31681 - 34143 3236 820 aa, chain + ## HITS:1 COG:SPy1414 KEGG:ns NR:ns ## COG: SPy1414 COG3158 # Protein_GI_number: 15675333 # Func_class: P Inorganic ion transport and metabolism # Function: K+ transporter # Organism: Streptococcus pyogenes M1 GAS # 69 713 10 648 666 588 45.0 1e-167 MAQKPDETLLRADTFTNVPKVSRRTLTKEEREELAKQQAAETKEAEKLAKTASKGAIGRW WRRLQSGPNKISLGMAIVALGVVYGDIGTSPLYTAQTFLSGQGGIANTDREAVLGMLSLV FWSITLITTVKYVLIAMRIDNKGEGGIFALYSLIRRHGAWLAIPAMLGGAAFLADSVLTP AVSISSAVEGLKTLPPLEALFKENGNLTLMITVVIIVVLFSVQSRGTESIGRVFGSVVLV WFTFLAVVGAVNLSGDWSVLAALNPVYGVKFLFSPHNAAGIAVMGTVFLSTTGAEALYSD MGHVGRGNIYFTWPFIKVALVFNYFGQGAWILKNQNNPEYQHMEGLNPFFQMMDPNVRYV AVILSVTAGIIASQALITGAFTMVSEATGLNWMPHLQVRYPARTRGQLYIPVINWVLCAA TLIVLGIFRDSEHISAAYGLALTITMITTTILLAVYMWYDRKRVLAVVFTIVFLAIQLMF FIASMAKFLHGGWFTMLLTLAILFIMYTWNEGTRLERAQRRHMMPKDFLPALDRLHGDFR IPYFADNIVYLTSDSDMRRLDTDIFFSIFADHPKRARAWWAVSVQTTDEPFTREYSVQNF GTSYLFRVRIRLGFKVSQSIPVYLHQIMHDLSDSGDLPQQKSVYPKVDADPEIGTIRYVL IHKDLMPESKISTRGAMSLQAKYAIRHVAGSPIKWFGLAPFNPLVEVQPLFISTRRPPRL KRVALRSRTPRVNEIVTVSKPEERPAAKPTAKNGGSGSTKAASAARDGSKTKPAGSAQKA AAAKDGAAKPAAADAKGGAKVDATKNDAVKVDDSAKLAKQ >gi|197324944|gb|DS990230.1| GENE 29 34739 - 35305 322 188 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1721 NR:ns ## KEGG: BBIF_1721 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 188 6 193 193 246 96.0 2e-64 MAQLPILCLAAQLVTLPLASMTVGLPALVGSGVSLPLATLAALVPATMIAWSLPGMSAAD VAAVRNTWLMDRAALLVLIAGMMALGAVMIPVYGTAGVAQALSVGGLGCFGVICGRLCGL RVGAAAPALYLFVCCAIGERAGGRLFFWQFPLMATLARQSAVCVAVLVVSACVCRVPDRV RIAAVRTL >gi|197324944|gb|DS990230.1| GENE 30 35363 - 36229 1189 288 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1720 NR:ns ## KEGG: BBIF_1720 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 288 1 288 288 591 98.0 1e-167 MCRLLGYATSGFNLSLNDVLGMHEVTDFRDLSEIHNDGWGVALLSNPTELPFAAGEVRKP ETGTKLYKSTLAARHDPIFRDFADDPARGGLWHLRLASSNLPLILENQQPFFANGLSFIH NGDISDDRGINIVLNRAYPINQGAFLSTGGRSDSAIFFSVILEYIAFGFALDEAVAQAVR QLRQAYPKSSYNCMIQSQDQLVALCAAGREKTSPRIVEIYDEYGKGEKAHDYRVMRYRDV QDCDGKPSGVVVASSGFEQNESDGWKALKNDQMIVASNRTGEYHVRSI >gi|197324944|gb|DS990230.1| GENE 31 36442 - 37179 923 245 aa, chain + ## HITS:1 COG:MJ0778 KEGG:ns NR:ns ## COG: MJ0778 COG1418 # Protein_GI_number: 15668959 # Func_class: R General function prediction only # Function: Predicted HD superfamily hydrolase # Organism: Methanococcus jannaschii # 89 189 43 125 169 70 40.0 4e-12 MTSYIPTLDQIDELHQKIAPSQAAYDLVHMHCVVVATIARQLARHQNALFTNKLGQGSGN ALDDSAGAAEQADLPSDGITGGRVPKRLIDEHLATIGGLLHDIGTYRVLKHDGSDGEPLQ FDGKRYILHGLLGYEYLLEQGVDESIAQFARNHTGVGLTQQMVIAQNLPLPPVDYMPVNL EQEIVMVADKYNSKSIPPKFLTAQAYAKRAERYGEANKRRWLDLVDQYGVPDVPALAARF RMRMI >gi|197324944|gb|DS990230.1| GENE 32 37257 - 38543 1456 428 aa, chain - ## HITS:1 COG:BS_yclH KEGG:ns NR:ns ## COG: BS_yclH COG1136 # Protein_GI_number: 16077441 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Bacillus subtilis # 260 428 46 212 226 88 31.0 2e-17 MNEDDVTLTGPEGENTAVESDAAADATADTATESPDAAGASDSTTVPDSVQFSIVFDDDG DDSDAIVIDAADAEIDTTAEADTTVATDGSAEEAPADDENPGDDTQDAAAQEPASADNTA DNTSADTGDADTGTTAADTADENLDAAAANASKVNETLKLSTGGKTAGDGQKKTRAGRVT VASASVDPAMRLSSRIDKELKRSKADSIRLKSYPTFSMNKVTVTDKKSGRHVLDRMTQAF YAGHVYSVLLPDNDRVLHETLMGVMSGIIRPHDGNVMNKSANLLELEPGEVRGHRLGLVP QQYAVRDDMSAERNLVYAMDASGRTFLKPKPVIARELLHKVHFDVDTPNAPVGKLDVVEQ RRVAIARAIACEAEVLIADEPTGGLNDDDSVEILQLLTSLTHGDPKRCVIILTESEAVAN IAETIIKL >gi|197324944|gb|DS990230.1| GENE 33 38573 - 40006 1721 477 aa, chain - ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 1 388 1 398 486 69 21.0 1e-11 MFVLKNAWSSIVRRKWRTLLTMFIAIIVTFGTLFGFSVLHADESATDGYNPQLVSAVIRP DAKTKATYNGADSSYTKNYLAFDAYDNYASALQAAGLTYSYALTITVPVRQSGDVKAIAG TDDQSADKTGGEMLYRSFSSLEAAHENELGRYKIVKGKQLDYSSQSKTGVLISQAFAKKN GLDVGDKFTVAFPNDAKKTIEQTVRGIYEYTEPAAAGQGSDAKLAKDNRDNVIYTAYYTF AMDGLYAADGKGWLIPDLNISFLLDSMSTYRKFEKVIKKAKLPANHELTSPTLIEHEKQI APLRSLASSMKPMLAALWIVGAVLLLLSWGSSLLVGRRREIGNQIVIGVSRGRIAWQFML ETLLLNLVGFAVGMVVGAFAVKPLATKLADGNAVSVPGNLIWTVIWSGLGTIVVLMVIAM IRVLLFRVRTLFAARSSNEVEVVDGGGTDDTATSDNAANDSDTADADDTAESAQEQA >gi|197324944|gb|DS990230.1| GENE 34 40487 - 42652 2694 721 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1716 NR:ns ## KEGG: BBIF_1716 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 721 1 718 718 1339 98.0 0 MRRSPQHIGRKGHQFLSQALRPRRIVLYVVFVLLGAVLSVVGIYGISALKLYTEANRFIS ASENLANTALGCGGGGNIGTSAREMVTSTRALRDELDKSQWTFLRDHTAYGNDITAARTM LDAMGNLVDGPFTDLMDLSKQLSGFSMKDKSVDLSAVTAMPGIVKQARADIKVETRRLEK LAPPKSSSIASMVKTGVSGLKSVDKMLNEYDELINLLPQLLGENGERTYLVAIYNPAELR SGGGMVGNIAPVTADHGKVTIGDFIATTDITYGTQPYDAENVKEAAVFGDQVWKYPQTTT VNPNFQRAAVTLKNMWLAQPGNENQEIAGVFALDPVFLQSLIGATGSVKLSDGKVLDGTN TVKFFLNELYVDHPIYKEQNAYTNKASKTIMTHVFSGVGTSTLSPMLKALRQTSANGHFK LWMAQEEELAALVQTKVFDANVAGMIPGSVEQPKAGVYVTEAKPSKLSWYLEPSITVKKT CGSDFAANSYRISDEVDAPARATNPMTIANAGLGDEYTVTVRLKNTMTEEQAKSLPAFIT GNTEKGTMQPRLFLMAPEGGAITSLAYESGEMVSNGTVEDRQFINLRLTQGIKPGETVTI AFTVRAAEKAKSTLDVVTTPIINEKGIYTGTNGKVTDTCGADVPDAVEDQWAGTGSDGSA NGDGSSNGTDGTDGGKSSGKTSSKPADENKNSTDSSNGGALDKLSSIKDGLSCPVDLKKF M >gi|197324944|gb|DS990230.1| GENE 35 42996 - 43082 68 28 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTILIPCYNEEESLPMLFARLTTFSENA >gi|197324944|gb|DS990230.1| GENE 36 43189 - 43389 67 66 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRVVFHSGVFVWFHRSDGRAGRFRRQCGQLWIRGELSTYPQIFEGGWRREPWVCHGVPMR EDAEGP >gi|197324944|gb|DS990230.1| GENE 37 43420 - 45099 1423 559 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1714 NR:ns ## KEGG: BBIF_1714 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 559 1 559 559 1037 99.0 0 MATSFSMDTIGFLQAINKLERRFEELVSPETMRKVCEDYDRDGTPTPWDHRLYALARDVF ACGSWTTNLCAAAMSFNGRLVGECRRFLHGCSETVRKYGISVWLYELLNDSTLALFRDDP SDYMPSLIRMTTVEELMRRPRGRKRFGNRKQRGLAMEEHSTQMHRLAAYTLLNWGADERR SLDIARMLLLYPGIGMCMLREDGDVLRFGAAPDMRYRRVVDYLHERRAQADAEYELHGNQ WMSEYMGRHDDEEPAVGEIATADRDAGGCSSKRDGVRGYAEVGDESLCDCESCARIDMED RLDLLKCERRYMYDVVRLIDAYEKMWDDEPIDVDDRMLALEHNRDVPGEPLWQDVAFLND LAYSLMGDVMAHDLILGFERRDRKRFDRGVEQLELLTETLVRFGLLSLPIIAFMNGFDEF SRGLDDDYATDGTLYSTSEADIQRLTRRMQKRLDKLSEEEMNAKAHLGESLANIVLARFP DERLARGCALALFRGNPDQYDEVVESMLMRPDDDPGDMGPGDGDDAPLGDVPNDDVLRRL DFDVEELDDDLELAMAVDL >gi|197324944|gb|DS990230.1| GENE 38 45223 - 46122 1311 299 aa, chain - ## HITS:1 COG:FN1754 KEGG:ns NR:ns ## COG: FN1754 COG2022 # Protein_GI_number: 19705075 # Func_class: H Coenzyme transport and metabolism # Function: Uncharacterized enzyme of thiazole biosynthesis # Organism: Fusobacterium nucleatum # 47 291 3 248 257 293 60.0 2e-79 MTIASTTPAAQSDDPVLDELIGTATNTALLPEPDAHAYDDIATGDADPLVLGGHKFTSRF ILGSGRYDLNLIKATIENAGTQIVTMALRRCRTTENNLLDYIPKGITMLPNTSGARNAEE AVRIARLAREVCQTDFVKVEIEHETKYLLPDNEETIRATEMLAKEGFVVMPYMFPDPIAA KRLEEAGAACVMPLGSLIGSNKGLRMRDFIEVIIANTHAPVIIDAGIGRPSQAAEAMEMG ADAVMAYTAIASAGNIPLMARAFKHAIESGREAYLSGLGTVTEGHAVPSSPTNAADYLH >gi|197324944|gb|DS990230.1| GENE 39 46245 - 46679 340 144 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1770 NR:ns ## KEGG: BBPR_1770 # Name: thiS # Def: ThiS protein # Organism: B.bifidum_PRL2010 # Pathway: Sulfur relay system [PATH:bbp04122] # 81 144 1 64 64 114 100.0 1e-24 MADGSQPNAPGIPAYNRTGITKKRMIRVMEGRTTSQGTACSSDPFFISADAGAPDRRSTG NGRQCNVADMGITPATEEGHMIINGQQEDIATPLSVDELIARKGLNAGRVAVEVNGAIVP RDKRAQTMLSGTDTVEIVTFVQGG >gi|197324944|gb|DS990230.1| GENE 40 47033 - 47428 150 131 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1711 NR:ns ## KEGG: BBIF_1711 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 125 39 163 640 190 97.0 2e-47 MPQPGTAASGFAPNTVPGTGTLPPVPQPAGPADNGGSAPQGQPGSQSQPGKKPPLTPAQR KKRKIIIAIIAAIVVVAIVVGGVAAFLILHGKKNAAAGPVQTSDTTDATPKKTQKQSPTQ IEGKKRSAKSP >gi|197324944|gb|DS990230.1| GENE 41 47425 - 48840 1712 471 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1711 NR:ns ## KEGG: BBIF_1711 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 449 170 618 640 827 99.0 0 MTNFVCNYDTSDWGWDGGAVLSDVMPCANGDASSSSDSDYGSSSQSADDGQYAFGVWTPA MDESKVIYFSALKSGEKMYSDPVVAATYGPNPAVFVIYAVKTKAVGTTPETVHLFAHQVD LKSGELSDRIDLRTEEDNLINLQQDYEFDVLAQSNNRVAIEKSWKTTEKRTVNDDQREVE IGHKQIMGLSGGAKQAETLQTFKDSVSISKDSGGYQSLNTTEVDVDDYHVFDTYVVKDSA YHLYSIDSNKEIVKIPSDYCSPGDTYRCDLQGLYRFGANQYVLNPSESYNGNKLLILDAG TGKTKKVTDLLNINTKDDQYVNFTDFGQFSDGSLYFQWDESSDSKRVFILSRDLKVTEVL DGGRWARLMLNSGEFEGANYLLKQFYVKTTDENIIVDEKGETVGSYTLTPSGDDADDYDH TAVDWIMWRDGSENTVTVTRGQAPGEPAPDSSDGSGSSSGDGSAGDSSSGD >gi|197324944|gb|DS990230.1| GENE 42 48987 - 50051 1120 354 aa, chain + ## HITS:1 COG:MTH348 KEGG:ns NR:ns ## COG: MTH348 COG1216 # Protein_GI_number: 15678376 # Func_class: R General function prediction only # Function: Predicted glycosyltransferases # Organism: Methanothermobacter thermautotrophicus # 28 232 2 214 313 85 32.0 1e-16 MKGMTYRNDKTGEATVEHTCDARAVFDKLAIIVVTYKRQQLLEELLASFAQLTVAPWRIV IVDNEHSDETQDMVDEFREKADGLWGTTDADRKDGTSRVVYAPQTDNLGGAGGFSVGVKV AYDLGAEWFWVMDDDVAVLPDGIEKLAKWGRDHDVIQGGKLDFDGGPFYWQYNFIVPLGI PNPIAPAAFGSAGYRVMNTLCFEGGLFRRRIVEKIGLPDPRFFIYWDDTMYGYLASKVTN SIVVPDVVMRRTRDISNWDIAGLRQLNSTSDMNRYHILRNRGYMARYFMVHGDYRPVLFA LGTAATVAKEVIRLVAVDREHVRTGLVQIAKGWRDSHKLMHDPKWRPMPPLVRQ >gi|197324944|gb|DS990230.1| GENE 43 50136 - 50486 364 116 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1709 NR:ns ## KEGG: BBIF_1709 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 116 1 116 116 207 96.0 1e-52 MWRNFTHCGVLYAHVPEVDPLTSPPAPRDAAGATAEPATAADPDMSAEAVRTRIEAARIK AENELIDYIRSHADAIGFPGELGVSRAVNGICLRVLTTRGDDAFDLIKDVSDFVVA >gi|197324944|gb|DS990230.1| GENE 44 50837 - 51577 605 246 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1707 NR:ns ## KEGG: BBIF_1707 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 246 1 246 246 434 99.0 1e-120 MHFGSGSVVPSRTGFTPTGSPRPSRPGQIDPGLIEGIAGGADPSVVSEMSHASAAALLDR VHHSADPQVVKRVLTLVDREGVDMIAELWSRSEPDSLPGIMWRLYTLRSWMRRDRDLISR LWRLGEPVATAASAIAGVDQAPTEADIAHTADSILAGAFTGDFAVALERASAFVDVVAQG LRVEARHMVRQAEAKAGSETATAADLAEAHVMRSRSAKLMHTAGNLIATSKDFRHGAQLW RRGKLD >gi|197324944|gb|DS990230.1| GENE 45 51579 - 52703 1002 374 aa, chain - ## HITS:1 COG:Cgl1286_1 KEGG:ns NR:ns ## COG: Cgl1286_1 COG0494 # Protein_GI_number: 19552536 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Corynebacterium glutamicum # 54 187 79 186 194 78 32.0 2e-14 MQPVRHNGRVSGEVKIVEAAGAVLYRRNTDFQGWMKFSDDGRQTSAASRLADFDTLEVCI VHRPKYDDWSWPKGKLELNETHRHAAVREVSEETGVPVALGPFLGEIEYPLAEEGKKTRR SKDRTVDTKHILFWMARPIDPEDAVRRADAFGPVHRADVGEIDSVEWVSVQRARRMLTHS TDRDILALFVDRVEEGALDGDMLLLVRHGKAEPRKQWTGTDDKRPITPRGASMAYSLDRE LACYNPTRLVTSPWLRCQQTIQMLSWQTGLPLHTAEPLTEDAFAADPEAAWQCFHKELKN TLQRHSATAVCMHRPVIGGIFGHLRELCATKSLMKRLIPSSPYMPTGTAIALFVVPCGDT VSIIDIQKVTPLVY >gi|197324944|gb|DS990230.1| GENE 46 52684 - 52758 62 24 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MADPQGPAIVITDEKQRSHAAGEA >gi|197324944|gb|DS990230.1| GENE 47 52863 - 55100 3148 745 aa, chain - ## HITS:1 COG:Rv2984 KEGG:ns NR:ns ## COG: Rv2984 COG0855 # Protein_GI_number: 15610121 # Func_class: P Inorganic ion transport and metabolism # Function: Polyphosphate kinase # Organism: Mycobacterium tuberculosis H37Rv # 37 738 46 740 742 746 55.0 0 MAQTFDAPSKAILRSQIAEHIAETDKPDKREPQAGEEPLPADRYFDRELSWLKFNQRVLE LAEDEDQPLLERCNFAAIFASNLDEFFMVRVAGLKRRIDTGIAVTAASGLSPRQQLRAIS EQAHRLQNEHAHYVTEKLLPALADEHIVLLSWDRLTTTEQERLSRYYRQQVFPVLTPLAV DPAHPFPYISGNSLNLAVLVENPNSGKSHFARVKIPGNMPRLVPVDDLTDEESREERFGF ITMENLIIAHLESLFPGMIIKEARSFRVTRNEDIDVEEDDAENLLNAMEKELLRRRFGPP IRLEISDATSPFLSQLLADQLGVNPEEVYRLPAPLDFTVLFELQSLDRPDLKNRPFIPTT NRQIAEVESSRAQDIFAAIRERDILLHHPYDSFSTSVQAFLAQAAADPRVLAIKQTLYRT SSNSPIIDALIDAAHAGKQVLALVEIKARFDEDANIAWARKLERAGVHVVYGIVGLKTHC KLIEVVRQEQDGLKRYCHVGTGNYNPKTARLYTDLGLLTCDPVVGQDLTRLFNQLSGYAP KSSFHRLLVAPRTVRTGLIQRIRREEDAAKAGKEAWIKIKVNSLVDEKTIDALYRASQAG VKIDIVERGICALKPGVPGMSDNIRVRSILGRFLEHSRIYAFCNSDGPQIGEGPISGPEV WIGSADLMHRNLDRRVEALVRVTAPEQIDELIRYVDLQMSDSTASWHMQPDGTYIHHSRD DEGRPLVDSQEYLIRKHQRRPRTNN >gi|197324944|gb|DS990230.1| GENE 48 55988 - 56569 -248 193 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1704 NR:ns ## KEGG: BBIF_1704 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 119 1 119 307 156 82.0 4e-37 MACSIRVKPGNLRSRPSPSVRGGPARRHGNLPRRRCTRRSGGANLLNCNVVCHIPIETNS AAAAQRETTMWSKARDLSTSRRVIHSFCGQTTPRWHIRVIWNRLHLASSRKHPAAESGRI RANLSATFARAHLAERRIPRAHERPSRLRSSLPVSRSRQTLTRTHPPVITTGVPHQRKNT QKLHCVAFPQASQ >gi|197324944|gb|DS990230.1| GENE 49 56597 - 57409 526 270 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1703 NR:ns ## KEGG: BBIF_1703 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 270 9 278 278 478 98.0 1e-133 MPRVVCPIPVSSVDGNQSIGTLTHAGCRNTVVFSSASGGAGTSVFAAMVAWRLAQRKLQC ALVDCDFAAGGIDVLLGIENEPGLRFQTVDIPLGKTEGAALNGELPQWERVGVLASQPWN GSDPEPWTVSAVLEALAQANDVVVVDIGAPSALHSLPMLRQCRQVVLAELTVLGLARARA ARAMMIRQGESRPIMVGVVPRGLSRRGCVVDAHEASEYLHEELAGVVAPDRGLHGDVLEG LGIRAIGKSSRKAVDAVVGAIEMGLGGDVP >gi|197324944|gb|DS990230.1| GENE 50 57406 - 58401 430 331 aa, chain + ## HITS:1 COG:Cgl0301 KEGG:ns NR:ns ## COG: Cgl0301 COG4962 # Protein_GI_number: 19551551 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Flp pilus assembly protein, ATPase CpaF # Organism: Corynebacterium glutamicum # 5 316 58 366 377 199 43.0 9e-51 MIEFGPLDALARDPTVTDVAITCEGRVWADRGGGMTECRLPMPLRTPRIVREYAVRLCAQ LGRRLDDACPIADASSEDGIRVHAVIAPLVAQGAAVTIRFPDRRLLGLTGLRDAGMFPPD WLTLLRNLVKNRARVLISGGTGSGKTTLLKALLAECDSLDRIVTVEEVRELGDLGRGNHV SMVVRGANVEGAGAVGLSELVKATLRMRPDRVVLGECRGEEIADLLRAFNSGHLGGMTTL HADGIDRVPARLIALGMLAGLDAHTLTMLAEGAFDVMLHLERHHGRRRIAQIGCLGMRDG VLSGDVVALWDGEGAMMPCPRWHDFTGRWGM >gi|197324944|gb|DS990230.1| GENE 51 58604 - 59131 157 175 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1701 NR:ns ## KEGG: BBIF_1701 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 175 56 230 230 300 100.0 1e-80 MGLSGVIAHMSSSVRAGGMISDVLADVDGSGFAGVPLTASRLKRLLMRQRMPGESAAQAE HVAFELAVACAMCERSGCSLADCLDVVGENHRISRLLHDSRRSAFAVPRATAALLGALPL VTIGLGELLGARPVQVLFGSAQGNACLAVGGAGYALGLLWMSSMMRNTGTNVDTV >gi|197324944|gb|DS990230.1| GENE 52 59062 - 59337 224 91 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1700 NR:ns ## KEGG: BBIF_1700 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 91 1 91 91 124 96.0 9e-28 MPDRSDTDNSPISNGNDTAAPPSPATSDGMPVKRPDRAESGHIINAINTMTAHAIAFHIT PPLNVHDGNQTVSTFVPVFRIIDDIHSSPSA >gi|197324944|gb|DS990230.1| GENE 53 59285 - 59710 127 141 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1759 NR:ns ## KEGG: BBPR_1759 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 141 1 141 141 219 98.0 2e-56 MSLPLLIGLLSVSLRSGMSVTRSLEGVGEAVGGALGGGLCAVADALHRGSSWKDAWNAAD FGDYAETSAILRGVLEPSWTRGVSPIGPLTTASEQWMEGERTAIEQESASLSVKLLLPTG LCMLPAFVFLGILPSVMAFVG >gi|197324944|gb|DS990230.1| GENE 54 59764 - 60018 87 84 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPRRADAPMLPTVRVIAAIGPVRPSTAIIVSSIFMTILSRLALPNYKALSTVPHQARPPS GFRAMWSKAAELSTMRRVIHTLCG >gi|197324944|gb|DS990230.1| GENE 55 59915 - 60205 230 96 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1698 NR:ns ## KEGG: BBIF_1698 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 96 1 96 96 140 97.0 1e-32 MNIEETMIAVDGRTGPIAAMTRTVGNMGASARRGICLLDARLRTLSAEPEEGATTAEYAV VLVAATGFAAVLVALLKSDTIKTLLTDIVKKSLSVG >gi|197324944|gb|DS990230.1| GENE 56 60843 - 61250 269 135 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1697 NR:ns ## KEGG: BBIF_1697 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 13 135 1 123 123 158 98.0 7e-38 MAQRIQPRRPSPVRAYCSRLMQSDEGSGTMACVMLIALAAALIATVASVGGALLCRSRAR SAADATALSAASAYWSGGASDPCAVGRRAAAENDAQLESCAVEGDDIVVTVSVPLRLPFM SRVSQRSRAGPISCE >gi|197324944|gb|DS990230.1| GENE 57 61362 - 62480 1037 372 aa, chain + ## HITS:1 COG:Rv2252 KEGG:ns NR:ns ## COG: Rv2252 COG1597 # Protein_GI_number: 15609389 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Mycobacterium tuberculosis H37Rv # 8 340 14 306 309 102 28.0 1e-21 MGEAKTMVALIGNPVSNKGWGAVVGEQVFTMLAEAGQRHGFDVMDLTGTSFDDSLTAARE NRALYDYLVVVGGDGMIALGANAVCGSGIPLGIVAVGSGNDFARGLKLPVNRVKTAVEGI VGAIACGTYLDVDMGRVRSTEIACMVHGESGEPVVDEEGRPVNGLIDRYYAGMLNCGLDA SINDRANHSRLPGGSARYAAAVLVEIARMKQYGYHVKATLSDGTVEEHDIIAPLLTVANA RYIGGGLEVSPYSLLDDGMLDLVWLNCKPNVGQCAKALSNAYNGRLLASQIFSWKRVRQV EITRAHEGDEPPVLMADGEYVGHLPVTVTAQAKALRVLVPPAVAHWHDSRSEEHIMAAIE RDGRDPVTGEFI >gi|197324944|gb|DS990230.1| GENE 58 62671 - 65535 1406 954 aa, chain + ## HITS:1 COG:MT3824 KEGG:ns NR:ns ## COG: MT3824 COG2812 # Protein_GI_number: 15843342 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, gamma/tau subunits # Organism: Mycobacterium tuberculosis CDC1551 # 3 366 1 361 578 375 58.0 1e-103 MALALYRRYRPDTFEGVIGQDQVTVPLMRALDSGKLTHAYLFSGPRGCGKTSSARILARC INCAKGPTSHPCGECASCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR YKIFILDEAHMVTQQGFNALLKIVEEPPDHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP QEVMGPYLEEICAKESIKPEPGVLKLAMRAGGGSVRDTLSVLDQLMVGAVDGVIAHDAAV ALLGFTPEALIGEAVDAVIARNGEALYGVVQKVVVGGFDPRRFVEDLLARVRDLLVLTLG GAQAESVLSDAAEAEAEDMDDLRRQASSLGLGALTSMAETINTTLGSMTGAISPRMRLEL LAARLLAGREGLDVAPAAGGTAPGADSAGTGRGAAGVNARTGGIAESRSGGTTPRRGGFI GSARNQQTDARQSAASQTNTSPSRTAGTQPDRALQTEAPTMAEVPATADAQAGAPSPAAQ APSAARVPSAGEPTAAQSSPQGDDRTPDERWDALVAGLPADVAAYVNRSKVPRIHLEQHE PGGKGTLWIKFDKALSKYAFAKAVAGEEVGGTRNVVQIMRAETRKAFGDQVQLAPTKKMA DGQVAPPFGQLPADEQQRISAQIVKASLSASLGAMSVGNNAKEPQTPPESGDTASADTDE VHRAVHDAPDATVAHDRDNNRAVAQDTSRADAQSTVDPWALPEAGAGDAWSPTDDASHNV SRDVSRNAPQDEGYHAKHIAVPDLSDDTDPWANDGGNSMPVDGVRGGDAPGTPQNVAHAQ SQSREDSERTNPGPTAVPESMSAEDPWAGMPSSVASASSSIAAPSAGSPAALQGSSDDLA APGRPENPGVEPGTTHLQQTPGAAAGQRASRPAYNDTDPFAGADPYAQEDIPMPTVAPED DEYSMNDVSLGSPETMSLDDVKQFFEVVKPVEEYGPDDPKNPRNIQHVNKHDSE >gi|197324944|gb|DS990230.1| GENE 59 65544 - 66146 560 200 aa, chain + ## HITS:1 COG:SA0438 KEGG:ns NR:ns ## COG: SA0438 COG0353 # Protein_GI_number: 15926157 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair protein (RecF pathway) # Organism: Staphylococcus aureus N315 # 3 199 1 197 198 236 54.0 1e-62 MALAYDGAIQRLIDAFAGLPGIGPKGAQRIAFYLLSASDEETGKLVDAITEVKEKVRFCD ICGNVCEVSPCPVCADPRRDHGVICVVEEPKDVMSIERTREYRGQYHVLGGAINPMANVG PADLNIPKLLDRLKTDEVKEVILALDPNIEGEATTTYLSRLLSPLGIKVTRLASGLPVGS DLEYADEVTLGRALTGRREA >gi|197324944|gb|DS990230.1| GENE 60 66335 - 67099 983 254 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 1 241 1 242 421 279 64.0 4e-75 MALIVQKYGGSSVADTESIKRVAKRVVETKKKGNRVAVVVSAMGDTTDDLIDQALSIDSN PPEREMDMLMTAGERISMSLLAMAIHAAGDRAHSFTGQQAGFFTDTRYGAAHIKAVKPDR VQNALSLGDVAIVAGFQGINAKGDATTLGRGGSDTSAVALAVALGADICEIYTDVDGVFT ADPRIVPKASRIPVIGYDEILEMSSCGSKVLALRCVEYAQRFNMPLHVRSSFSHRPGTLI VPDGVDPRSLPNID >gi|197324944|gb|DS990230.1| GENE 61 67170 - 67736 885 188 aa, chain + ## HITS:1 COG:MT3812 KEGG:ns NR:ns ## COG: MT3812 COG0527 # Protein_GI_number: 15843329 # Func_class: E Amino acid transport and metabolism # Function: Aspartokinases # Organism: Mycobacterium tuberculosis CDC1551 # 15 188 247 421 421 135 44.0 5e-32 MSDNNSKSMGDLFPDLGPEAPVISGVAHDRSEALATVRGVPNEPGMAAKVFTELATAGVN VDMIVQAGASVGTAEISFTVPESTVKEVENVLIDKHDELGYKSFDINRSVGKVAVVGVGM KTHSGLAAKFFTALSDKGINVLMISTSEIRIAALVPLDQLDDAVRALHTAYGLDADQVEA VVYGGTGR >gi|197324944|gb|DS990230.1| GENE 62 68143 - 69237 1402 364 aa, chain - ## HITS:1 COG:CAC0022 KEGG:ns NR:ns ## COG: CAC0022 COG0136 # Protein_GI_number: 15893320 # Func_class: E Amino acid transport and metabolism # Function: Aspartate-semialdehyde dehydrogenase # Organism: Clostridium acetobutylicum # 4 364 3 360 360 433 56.0 1e-121 MSEKLKVGILGATGMVGQRFVTLLENHPWFEVVKLAASAHSAGKTYEEAVGPRWKMETPM PEYVKGMTVHDVADVAGMADGVDFVFSAVNMSKDEIRAIEEEYAKTETPVVSNNSAHRWT PDVPMVVPEINPEHFAVIEHQRKRLGTTRGFIAVKPNCSIQAYTPALAAWKEFEPREVVV STYQAISGAGKTFKDWPEMVGNIIPFISGEEAKSEKEPLKVFGHVDADKGEIVPFDGGLK ITSQCIRVPVLNGHTATVFLNFGKKATKEELVDRLVNYTSKASELGLPHAPKHFIQYLTE DDRPQVKFDVDYEGGMGVSIGRLREDSIFDWKFVGLAHNTLRGAAGGALECAEMLKALGY ISAK >gi|197324944|gb|DS990230.1| GENE 63 69406 - 70026 709 206 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1689 NR:ns ## KEGG: BBIF_1689 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 206 1 206 206 412 100.0 1e-114 MSIASQEAQKQLDRIVALGYPDVADMSAAAFRALARPLIHALEHTDLGSNILLIPTRELV SPESLIARTSINRMAGFTTMPPRDIASFLPQDGFEPPEGPFYLVVEPHTGTCYINREPDV ARKLIDSDERTPLTLEEGLAIATQHPDWLEIKNGFNLLGSRSADGRVPSIWMSQNAPRLG AVWPNSRHTWLGNAYCMARRGVSLFH >gi|197324944|gb|DS990230.1| GENE 64 69987 - 70250 110 87 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGTSCVSAFLPRPMASLIIARRRESAREHIKNIIKPGVVQHSVTYQETPSIHRSRPDASL CGGPAKATDKRSSEIQWNRLTPRRAMQ >gi|197324944|gb|DS990230.1| GENE 65 70238 - 72166 2122 642 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1747 NR:ns ## KEGG: BBPR_1747 # Name: not_defined # Def: serine/threonine protein kinase (EC:2.7.11.1) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 642 1 642 642 1068 99.0 0 MKCPYCGNDESPDSKFCGNCGQPLQQQVSQAAPASQPAVSQMPQPSAAQQPATPAVPLPG GGFAPAPAAPQEPLQPTQPLQPAQSQPQPQQPVAQPAWPQAQQFAQPSGAGVSTPAAPAT QPSAATPAVPGKTPKPKSRGKFIGLIVAVVIALALGVGLALFFTYRAGIWGGTPLPTAEE ISGASGGEATADDVVTQLKAKGVKASKAIIFSGKKKGVFLGYEGMKPGDRVQKDAAVIVQ ESGGPGVPKNTMGKQATKVVSTFKTMGVPVHYKQVPVSDTKKKPIGSVVATYPAEGQALS DGDKDDGIYIGVATKSDGGAISIDIVGRDVDTVKSELESQGHDVTLVPRLASKKFVGKVS GSDPMPGSTVAEGDAVTLYYGIDASGVKDAYTVHDSPETGGDNLLGVSGVAAGTWCNNSG DCITFKDGGDGSEGNSYIPYPKGRDGTEYGEYESLSSCDAIQQPYCSSPKADYLLTGDTG AFELFPRSSMTNYWCGTSQEDSNTAGGIVCNNGKMVENGDYNNISGATYHMQDFYLVVPV GADLNKLESDGYFDADALAAAKKQKAVNTTKPFLIYRDPKLYDKTTADMTNNSANPFMPY NGYVGSKSDIVKMKPAPSDDTVYYLTVSIDLDWGELPDADVK >gi|197324944|gb|DS990230.1| GENE 66 72466 - 72687 137 73 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1687 NR:ns ## KEGG: BBIF_1687 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 73 1 73 73 117 98.0 2e-25 MGPDSDYRCGGKKGFKSCYGSSSTYSEAEINKPMDSVYVPAGISSDKLEGLAGASYQLPT CQAMPSLTAPSRS >gi|197324944|gb|DS990230.1| GENE 67 72873 - 74333 1632 486 aa, chain - ## HITS:1 COG:CAC2806 KEGG:ns NR:ns ## COG: CAC2806 COG1409 # Protein_GI_number: 15896061 # Func_class: R General function prediction only # Function: Predicted phosphohydrolases # Organism: Clostridium acetobutylicum # 138 420 87 311 317 76 22.0 9e-14 MVATSRRVWRRTGRLATVEGMTLRFHDDGTFRVLQMADIQDGPEVNRDTIHMIEAAINEA KPDLVVFTGDQIRGYDPAYIDTFLRRRGENPGARVRLVTEIEAKLHGIHRRIAARRDPNL PPQDDVVTMDDLMNDTRQKVRDTFSAFLGPVINAGVPFAATYGNHDFQCGILPDEQDDIY REFPGCLNPEADAAGGSPLAIEPGTFALPVLSSDGSEHVAMGVMLVNSGDYAGKPEENDA QYPRYVAHSRGLDLADSDGYGTPSAEAIAWLGDVQRTLAERNGDGEPVPSITFQHIPPQE FYDCLTEVPAWTPNAVEGARNYAGRCYVLNDAVCRPGSRLGEAIGCADENVGEVDALREA GGYFALYCGHDHKNSFVGHVHDLDLGYAPTCGFECYGPKSRLRGIRLFEFREDDPAAYET RMLTWGDLVGRYSGNELRVFFEDHCVTGAATLRNELRRPQVFATVALTLSTGFAAIVRSI ARRLRR >gi|197324944|gb|DS990230.1| GENE 68 74270 - 74443 111 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MFRSVRVTPSKRRYPAEITFRPLSGRPLTAWRRPLHAWWRLREEYGAAQGDSLQWRA >gi|197324944|gb|DS990230.1| GENE 69 74765 - 76675 2952 636 aa, chain + ## HITS:1 COG:Rv3710 KEGG:ns NR:ns ## COG: Rv3710 COG0119 # Protein_GI_number: 15610846 # Func_class: E Amino acid transport and metabolism # Function: Isopropylmalate/homocitrate/citramalate synthases # Organism: Mycobacterium tuberculosis H37Rv # 36 636 35 644 644 657 52.0 0 MGQDQSSVFDLAAVAAASNGGNNDPLLPPARFIGEPQKPSDMPYTKYVAYDKQVPFDYPE RTWPGKRLQRAPRWCSVDLRDGNQALVNPMDSERKLRFWNLLVSMGFKEIEVGFPSASET DFDFIRMLIERELIPDDVTIVVLTQCREHLIRRTYEALKGAKRAIVHFYNSVSVLQREVV FRKNKEEIKKLATDAAELCKDLENEAKGIDLYYEYSPESFTGTEPEYAVEVCNAVIGVIK PTPEHPMIINLPATVEMTTPNVFADEVEYVSTHLDDRDAVVLSLHPHNDEGMGVAATELA VLAGADRVEGCLLGNGERTGNVDLVTLGLNMLTQGIDPQIDYSNVPEIRKTVEYCNQIKI SERHPYAGNFVFTAFSGSHQDAIKKGLEAREVAADRVGADLDKFVWLVPYLPIDPKDIGR TYEAIIRVNSQSGKGGMAYLLKTNHNLDLPKRLQVEFDKIVQNFADTTKKEVKDEDIWRL FKDEYLPVEQSGMTAAGVVVGDTHDATLAPWGRLKLLKVAVSSGEDGSDTVLKARVLDRG VNVGVDEPHEREISGIGNGPIAAFLNAVSNLGIEASVMDYVEHTMSVGTDAMAASYVECQ VGEDAETQIIWGVGIDSSITTSALKAIISAINRSQR >gi|197324944|gb|DS990230.1| GENE 70 76844 - 79342 3654 832 aa, chain - ## HITS:1 COG:all2952 KEGG:ns NR:ns ## COG: all2952 COG0744 # Protein_GI_number: 17230444 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Membrane carboxypeptidase (penicillin-binding protein) # Organism: Nostoc sp. PCC 7120 # 95 701 25 623 755 246 29.0 2e-64 MASHTRTVNSSSGRRAAGTSGRRAAGASGRTATGTQAGAATGTRTGGTSATNGYSAQRNS GSRRGRGANPPEGTHRGGGTHRSPGSKGPKAKGRKKHLILKWTLGIIGLFLAVGIGAFAY LYATIEIPQPETIALAEKTSVYYADGKTKIGTFAEQNREIIDCSVLPKYVGQAVVASENR TFYTDRGIDLKGIARALINNVTKGTRQGGSTITQQYAERYYLGETTTYMGKLKEAILAVK IAQTQDKDTVLCNYLNTIYLGRSAYGIQAAAQAYFGKDAKDLTVPEAAMLAGIIPSPSNW DPAVNAKQAKSRFERVINIMKEDGYITAKQASEATMPKTVTNAQQNIYEGPNGYLLQMVR SELINSKAFTQDDLDTGGYTIVTTIDKSKQDLMYQTASPTKGNAGMPDGVQTGGLSVNVK DGSIISLYAGEDYLKKQLNNVTDATYEVGSTMKPFTLLSTVQTGVSLDTVFNGNSPRSFP GLKQPMSNSGGASYGYINLYKATANSVNTVYMDLQQHLGADTIIKTAHTAGIKGKITDDG YVTLGNSGLSMIDMARGFSTIANQGKKPTLHIVASVKSSKGPELYKAPSTAEQVFDANDT GLVVKAMEGTIQYGTGRAASAIGKTMAGKSGTANDNKAVSFIGFTPSTLTMFAIWNPGAN GEALELPTINGYYKGMGYPAVLFTNYMSRALENVADEKFPDVTDSGKIGGPDGTWGTGSQ YSSWGNSGQSQSGNSQGGSKSDDQSSQSGTQSGDGSGSQSTKPQTGNGSNGNGNGSGGNG SDGNGGNGGNNGNSGNGGNNGNNGGGSDCATDPTAAGCSTGNESSTNGIASQ >gi|197324944|gb|DS990230.1| GENE 71 79802 - 81025 1703 407 aa, chain - ## HITS:1 COG:ML0092 KEGG:ns NR:ns ## COG: ML0092 COG0562 # Protein_GI_number: 15826927 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-galactopyranose mutase # Organism: Mycobacterium leprae # 23 405 6 386 413 446 58.0 1e-125 MEGSRRNRHRRRGPQRKEAMNADLVIVGAGLFGLTIAQQAAERAGARVEIIDVRSHIGGN VYSYIDEETGAEIHQYGAHLFHTSTKRVWDYVNRFTAFTDYVHRVYATHDGEVYPLPINL GTINQFFRAAYTPAEARQLIAEQAGELAGTDPTNLNDKGIQLIGRPLYEAFIKNYTAKQW QTDPAELPASIIKRLPVRFNYDNRYFKDTWEGLPRDGYTAWMERMIDDPRIHVTLGTDFF DESQPLNKKALRAAGTPVVYTGPIDRYFGYELGDLKWRTVDFKEVRYDEDDHFGCPVMNF SDADVPYTRAIEFKNFNPERRDAQNHNRTVVWEEYSRFAERGDEPYYPINTDADKALYER YAARAAAEPNVVFGGRLGTYKYYDMHNVIDAALTAYEEQVAPMLRAR >gi|197324944|gb|DS990230.1| GENE 72 81178 - 82086 835 302 aa, chain - ## HITS:1 COG:CAC0882 KEGG:ns NR:ns ## COG: CAC0882 COG1272 # Protein_GI_number: 15894169 # Func_class: R General function prediction only # Function: Predicted membrane protein, hemolysin III homolog # Organism: Clostridium acetobutylicum # 89 296 2 210 214 100 32.0 4e-21 MSASISAPSIRKSTAQRKTARRQTTGGGMRAAATAQTATTAGMATTQTGASATAMNRALE QYRAARARYRQAKATLKAAERQVTPVDAFGNRKPRLRGWQHLITLPLCIAASIVLICIAP AGPVKAACAIYGASAILLFGNSALLHVVPWRSAKVTRVLCGIDYSNIFLIIAGTNTPVLF ALSPSIRWPYLTVIWAAALVGTVMHIVWLRAPNWVFTVVYVVLGLAPVTLLPALWTAPAV GPAATVLIACGGAAYIAGATCFAIRKPNPIPGWFEFHEVFHMGTVIGYTCHVVAIYLVVC AL >gi|197324944|gb|DS990230.1| GENE 73 82608 - 86675 6176 1355 aa, chain + ## HITS:1 COG:BH0831 KEGG:ns NR:ns ## COG: BH0831 COG1404 # Protein_GI_number: 15613394 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Subtilisin-like serine proteases # Organism: Bacillus halodurans # 102 711 68 588 799 110 25.0 2e-23 MANKQWPRWVAAVAALAMAGSLPGTALAAPAQGDAASTTPTLSTGNLKSKVSSQLQQAKG EVTAFIQTASPSALERKNSVLKNFSRQRSALPTLKQRAQSAQAATQSAKTAEKTSVNVFS QLQSLDSSVKKIYSTSYALSGVAVRADAASLRKLAEQSGSVAHITILTPKKALDTTNGSG EAPANKNNDQLVNAVKTWEQTGKTGKGVNIAVVDTGLDYTHADFGGAGTTEAYQTALNST ADPLTDPKVSKLLDKTKFKGGYDYAGATYNPNAGNNNPTPDANPIDGQGGHHGTHVAGTA LGYGVKADGTSGKTDTAGYQKLTAGDIASWKIGPGAAPEAGIYSYKVFGDNGGTTDLVLE ALDGIAKHNTEAEVNGDESSRISIVSMSLGGSFGASDDPENVAVDNLTADNVLSVIAAGN DGDITDIMGAPGTAKSALTVAASQSGKALQDAVEVTDGPASLKGQTLAGQYSVNYAKLDD FSLTGKVVRVKDKDNLEGCKAYSADDAAAVKGNIAYVEWNDAAVNCGSKTRFDNAEKAGA TGILFGSQANIPESGIGGNADIPGFQLVKNAAENKDLQSAIDDGTLTVTLSTKLRMSKDA DYSSESEDTIASFTSRGIHGSYDGTAKPDVSAPGVGIVSASAGTGNSDEIMSGTSMATPL TSGVAALVRQARPEYLANVVKAQLMNTANHDVLTADRKTAYGPLRVGSGRIDALAAVNNN VQLAGEDNEAITAQFGVIPVGKDGYTDKQTMRLVNNTDHDITYKLTYSARTPVPGVTYSV SGDNGGDTVVAKSGTSTSFRVKISIDQSKLTRTRDATQSAQVAGKDRQYVTDASGIITAT PVTQEDDATTLRVPVTSVPKAISETTTELSGFNNKKGTLSVSGHGLDQGDTATGYHSELV PFVYGAEDPADGYTGNGDAARSLAAGDIRAIGYSSTAPQLSDPSQGLLSFGIITDKTWSH LGNNFIPDVIFDVDGDMKADYMISVSTTEGNTQYDTAWATTTSATTGKVVDEEPIDPAYV SDSNQVVLSVKLSALGFTKDTKVAPIAYMAQIESIYAAGAKDQYIVDTAGGSKDDSFDAY HPALWFGDSATEGNGTVSFPDENGTKVAVHTADDSSETAPKVLALHKNGFFPNIETDEPV IDAHTVKNIDKALLETLVFAASKYQESNCTADSWAAFKKAFDAAKNVLDSDTATQQQVND AYTALRTAINGLVNATAKPSKDKLKAAVDAAAKLKESDYTADSWAAFVKALDAAKAVLAN DNATQEEINNATGALFKAEEALVKKAGTPTNPGKPSQPGAPAKPGASGANSGQNGSNAGV AKTGAAVTGISGAVMLLLAAGATLVIIRRRDAVRR >gi|197324944|gb|DS990230.1| GENE 74 87121 - 88518 1122 465 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1680 NR:ns ## KEGG: BBIF_1680 # Name: not_defined # Def: hypothetical protein belonging to the PAP2 superfamily # Organism: B.bifidum # Pathway: not_defined # 90 465 1 376 376 610 99.0 1e-173 MSEEQRVDDPAEISRDGAIPPDAVQVSGDRADAATSAERLPSTETTDAPADTPNEPDTAA ASDTTSSGASASDPAPEQARSSAKQEPEPVVPQASPASAWSALETIADHPLRALGSPAPA ARKRKAAAPDEHAADIDDEAAIERGLARRDPLTVRPRVSSRVLCAVFGVLMIAISFGAWW IAVRTEDGQSYEDMVFSGFHDSLPSWASALVAPFISRNITSIAGHPLNFTVIISALLIVV AAVVMLVRKRWWLVGQSAVFAALCFASTYLKGVLPRPFIINTVSQPANSAPSGHTMLAVV AGVLLLFAVPRGCRAWMALVGAAYALVIGLSVIAGAWHRPVDVVMSLLLAGGFALLAMAF TRTSGMDAPGKRASSPSVQIVGTVMITAGVLCCCYAAYIMWQIEPGLSLSASWASVGAHV STFAMIAGVSSLVFGMLLAMRQITASPLSRAGLVGAPPAPPKKKR >gi|197324944|gb|DS990230.1| GENE 75 88603 - 91521 3665 972 aa, chain + ## HITS:1 COG:ML0200_1 KEGG:ns NR:ns ## COG: ML0200_1 COG0550 # Protein_GI_number: 15827005 # Func_class: L Replication, recombination and repair # Function: Topoisomerase IA # Organism: Mycobacterium leprae # 2 611 13 608 608 599 53.0 1e-170 MGTGNKLVIVESPTKAKKIGGYLGSGYTVMASVGHIRDLAQPSQIPADGKARFGKFGVDV DDGFKPYYIVDGDKKKTVAELKKALKNSDELYLATDEDREGEAIAWHLVQTLKPKVPVKR MVFHEITKDAIKASLGNTRNVDEDMVDAQETRRILDRLYGYELSPVLWRKVGPGLSAGRV QSVATRLIVERERERMAFVRASYWDVTAVLGATDAEGEPASFESRMVSLGGKRLAGSKDF SDDGKLTPSGFADNVCQLDEAHANALAKLLADATFTVASMETKPYRRRPLPPFTTSTLQQ TAGNRLSMSSRQTMRAAQGLYENGYITYMRTDSVTLSQEAIAAARDAVEYHFGKSFLSDG PKQYVTKTASAQEAHECIRPAGARFHDPAELSGKVPADQLKLYTLIWQRTLASQMADATG STATVRLSAPAGEGGEAMFQASGTVIEFPGFMKATGEGRRAAAPAASSMGAGDGEAAAKR ASRETDDNGSLPPMQTGDRLAASSVEADGHETQPPARYTEASLVKTLEAKEIGRPSTYAS IISTIIDRGYVYERGRALIPSWLAFSVIKLLETKFPKYVDYQFTADMENGLDQIAHGQET GRDWLTHFYFGSGGDAATSADEAHAGLQQQVAQLGEIDARAINTIDIGDGLHVRVGRYGP YLEDMNHVDAAGNPKRASLPDAMAPDELTVQVGHELIDSNAGGPRELGVDPASGGTVEVR NGRFGPYVALVPLETDGGSSETKSKKTTVPKPKMASLFKTMSPESITLDDALKLLSLPRT VGVYEEANTETGELGEVTVEANNGRYGPYLTKTGADGKSETRSLASEDEIFTVDVDKAKE LFAQPKYGRGRGRGTAKPPLRELGPDPETGKNVTIKDGFYGAYITDGETNRTVPKQYTAE SIEPAEAFRLLAEKRAAGPSKRGRRKTTGAAAKKTAAKKSSTASATKKTVTAKKTAAKKT TARKTAAKKTAE >gi|197324944|gb|DS990230.1| GENE 76 91602 - 92336 646 244 aa, chain + ## HITS:1 COG:DR0111 KEGG:ns NR:ns ## COG: DR0111 COG0125 # Protein_GI_number: 15805151 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate kinase # Organism: Deinococcus radiodurans # 3 206 4 201 206 152 48.0 6e-37 MTGLFISFEGVDGVGKTTQVERLRDYLEAAGREVVVTREPGGTALGGSLRQLLLREPGDA AEADGADIAPRAEALIFAADRAQHVAEVVRPALERGAVVITDRYLDSSLAYQAGGRELTA DDVRGLSMWATGGLMPVRTYLLDMDPTAAHRRLQHDADRMESAGDEFQQRTRQAFLDLAG HEPGRFRVIDAAWPIEAVWEHIKADVDAVLADAAADERAAAQAAAAQAAVTKESDGNTPA GGAR >gi|197324944|gb|DS990230.1| GENE 77 92333 - 93517 1352 394 aa, chain + ## HITS:1 COG:Rv3644c KEGG:ns NR:ns ## COG: Rv3644c COG0470 # Protein_GI_number: 15610780 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication # Organism: Mycobacterium tuberculosis H37Rv # 3 389 4 396 401 154 32.0 3e-37 MSVWDSIVGQQAVVGQLQAIVSGDPKALAQSWLICGPPGSGRSNVARAFAAALESPDRGL SDEPTNITRQVLSGTHPDVTTLATNKVTIGIDDVRQLILTSEQMPSTAPWRIIIIEDVDR MLERTTNVLLKEIEEPSPHTIWLLCAPSAQDVLPTIRSRTRIVNLAVPSTKAVADYLMAS VNPALPAERQFDRHVAVRAARLAEGHIGIAKLYASDTQVMSDRDELIVGLLGLRKASDAV LLADDLIDTAKSQAEADVNRQTAAAEADFRRINGLGEQDRIPPKLRGAYNAIAKKDEIKR RATRRSRDVLDRALNSAASIYRDIAVLQNNAEDAVGLINMENRTAIAELSARLSRQEVVD RLEAITVARKRLLGNGNPMLVFEALFCALIPGRL >gi|197324944|gb|DS990230.1| GENE 78 93528 - 94634 1046 368 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 40 342 6 301 332 122 28.0 9e-28 MKRQPSAVMDAIPASKPDTTPVNDDPAPGPEQRPQPATSSITNVAAMAHVSIATVSRVLS GKRTKDDDIARRVRAAAEELNYSVNYAASSLRGAATNTIGLVIPSATDHFSAGLLDELEP VIDMERQQLLLGIGNEQHTQDERIESLVARKVDGIIIVPAAGVDLAHTLDRTTMTTPIVQ VGGRQRSFRTSMVGIDENAAMESIVAHLAEQGVRSAAYLAGKEVSFESAEMFAMFHTQMR THRLVTDTSWNRFGDSTVERGYQCVWRMFADSDARPPEAVICADDMIALGAMIALQTLGI RVPDDVRVVGYDDSPLALTTMPTLTSVRPPFLQIVTEALRLIGQGPDQAAHISLLPQLIV RGSTVVRS >gi|197324944|gb|DS990230.1| GENE 79 94495 - 94788 62 97 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAATLVMELVAGCGRCSGPGAGSSLTGVVSGLDAGMASITADGCLFMGLAVFGMTAGGRH MLAMRVGAHLMDGNTLTAAHAVRAGGRRMRAQVTRPR >gi|197324944|gb|DS990230.1| GENE 80 94772 - 95032 509 86 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1675 NR:ns ## KEGG: BBIF_1675 # Name: not_defined # Def: phosphocarrier protein HPr # Organism: B.bifidum # Pathway: not_defined # 1 86 1 86 86 113 100.0 3e-24 MVTRTTTITDPVGIHARPAAKFAQAATASGCTVTIAKQGGNPVPAGSILSIMGLGIKQGD TVEVTVDGDNAETVIDSLIETLTAAE >gi|197324944|gb|DS990230.1| GENE 81 95031 - 95294 162 87 aa, chain + ## HITS:0 COG:no KEGG:no NR:no METLLCVVAPVVPVRFVVRRYRHSSACVCRVGPRRYRLAITLLYANCWAAVLLAADTAVY HDFPIFWKTFTSSRVALLRVYTGVDRK >gi|197324944|gb|DS990230.1| GENE 82 95389 - 97047 2602 552 aa, chain + ## HITS:1 COG:Cgl1887 KEGG:ns NR:ns ## COG: Cgl1887 COG1080 # Protein_GI_number: 19553137 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) # Organism: Corynebacterium glutamicum # 2 543 12 551 568 348 45.0 1e-95 MVIKGVGIGRGVAVGPVIRMAAALPEPSDAPRADSVSAESEIERVTKSLALVNADLNRRA EEAANGDEGAKQAAPILQAIAMFASDPALAQSINTLIEQGKTAERAVLEGFGAVEEMFKA IGGYQGERAADLHDVGQRVIADLMGVPAPGVPVSDTPFVLVAEDLSPADTAGLDLDKTLA IVTSQGGPTSHTAILARARGIVAVVSAAGADDLKNGETVIVNAAESTITTEPSDEQVAAA EAAKAKAAKAKELRGKPGATKDGYHIPLLANVGKPSDGKTALEYGAEGVGLFRSEFLFIG NAEPPSVEEQTKAYAELLAQFPGKKVVIRMLDAGADKPLPFLTPEDEPNPALGLRGLRTL RTHMNVLEGQLKALAAADAQTDADLWVMAPMVADAHEAAYFVKLGKSFGLKKVGVMAEVP SIALMADQVAKVADFVSIGTNDLTQYTLAADRTLGSVANYQTAWHPAVLRAIKLIADAGN ANGMPVGVCGEAAADPDLAVVLTGIGVNSLSMTPVALDDVRAELAGVTLEEAQEKAAKAL NGDFYNPSEWNI >gi|197324944|gb|DS990230.1| GENE 83 97059 - 97196 64 45 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MINHALYRTSSHRICKSDAVREPAKQPNLVWRRSRLRQWNHIMVL >gi|197324944|gb|DS990230.1| GENE 84 97286 - 98137 570 283 aa, chain + ## HITS:1 COG:SMa2105 KEGG:ns NR:ns ## COG: SMa2105 COG3177 # Protein_GI_number: 16263601 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Sinorhizobium meliloti # 9 200 76 260 406 75 34.0 1e-13 MRPASWGDLPNPDMPRRPTMRREAQSTSAPEGTFEPLETVLAQDYEVGEDKSGLSESMRE VLNYLDAAECGIGQIQSGHPISLHSRARIAEASCEGHEVRQSTGLGYTIHPSVHRPTHAA HRGCAFRVPMPPGRDLDIVVQLLVDWWRSRKEPGLAVLDMAMFHYQFETMYPFTDGNGRI GRLLVLLQMMSRGLLSQPLLSVQTAMYLIGQPAVTASMLRRRFGKSPSAVQHALSHLVSV GILRAYPAGRGNLYIAPDIHKVLAAPLGAAIDVSAPLMCERGE >gi|197324944|gb|DS990230.1| GENE 85 98189 - 99181 795 330 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1671 NR:ns ## KEGG: BBIF_1671 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 330 11 340 340 621 99.0 1e-176 MGTGMIIQSATALDDGFRSKLDAFIDGYESVLSRFRADSLVTAMGESSHGGSFDFPDWAS GLFDLADAFCTATDGALDPCVGEDLIRLGYDARYSMTMEPDAEHHLGAVHGRPTWRNDVE RHGTTLVTQRAVHLDFGAFGKGYCTDLIGAILDGHAGDETVRQSATGPGSHAPYIIDAGG DLLIRTGESAQPAPLAEGSGHDTGDTVTIALEDPANPGTGAIGIASIVDGAFCASAPSRR HWGEEAGRQLHHLLNAVDGRPVRDVAASWVYVPSAAGRPYPTALADGLATACFVTAPGEL ARAFDFECAAVHADRTAIMSRHFPGNFFTV >gi|197324944|gb|DS990230.1| GENE 86 99416 - 99592 234 58 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1950 NR:ns ## KEGG: BLJ_1950 # Name: not_defined # Def: sugar (glycoside-pentoside-hexuronide) transporter # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 1 58 415 472 472 92 86.0 6e-18 MKMGLSVAMLLFTGVSTIGVASGAGYRIAAVCAAVLCGIGGIVFAFYNERKVLNRLDG >gi|197324944|gb|DS990230.1| GENE 87 99829 - 101595 2613 588 aa, chain + ## HITS:1 COG:FN1251 KEGG:ns NR:ns ## COG: FN1251 COG0672 # Protein_GI_number: 19704586 # Func_class: P Inorganic ion transport and metabolism # Function: High-affinity Fe2+/Pb2+ permease # Organism: Fusobacterium nucleatum # 185 555 29 406 433 224 34.0 5e-58 MRCRAVAHLRAVGCRALAVVAALFTVMAVMFAPQAMAADSSADHDTWADVAAAMDKQLQQ GQKEYKDGNTAGSTSDFMAAYNEIYVASNFTQVVTDNIGSDKQASQQQAFQDIQDLSYVA GNEAKIEQSVTALVSDLDSTAKQLDANTKLANPRDYDKALQEQIAKERKVLQSKQKKNPG KGDRSWTDVANEMMPILDKAYKSYAGGDGAKGATLVNDAYYQYYEKLGFEKNVMNAISGD RVSQVEYQFKMCRKSMNTGASLKDTKKLVDDLKAMLVEDAGKLDGVAADKEGSFTKFITS SVGQAFLILIREGLEALLVVAAVVAYLVKSGNKRFTKWIYVGVLAGLAGAGVVAVIFVLA FGGSGPIQEIMEGVCALIAMAMLLWTSNWMLNKSSVEAWNRYIKAKTEAAVASVSSQVDA GEKVASRTVISLAMLSFLAVFREGAETVIFYQSIYTMSRDAHGMVIGAVAAAVVLLIIFF VIRFTSVKIPIGPFFLVTSILMSVLVVVFAGGGVHSLIEGDALPATYLQGVPTNDWLGFY PYVECIIAQVIAAIAVIALFVVGFIKQRKAKAKAAVTAGAPNNQPNNL >gi|197324944|gb|DS990230.1| GENE 88 101633 - 102307 1254 224 aa, chain + ## HITS:1 COG:TP0971 KEGG:ns NR:ns ## COG: TP0971 COG3470 # Protein_GI_number: 15639955 # Func_class: P Inorganic ion transport and metabolism # Function: Uncharacterized protein probably involved in high-affinity Fe2+ transport # Organism: Treponema pallidum # 49 224 40 204 204 148 43.0 6e-36 MKNKKIAALLGVLLAGSMAFSLSACGSTNNASDNKSSGSSSQSSDKKDNSSSGAGFEEVP VGPSGTAEEQDKDAGPLTVGAVYFQPIDMEPASMGLKAADSSFHLEADIHANQKGTELGY GKGDFVPELTVNYTIIDKSTGKEVEGGKATSGTFMQMNASDGPHYGANVKLDKAGTYQLK LSIESPAKKGWMLHVDPETGVKGRFWTEPIEVTFDNWEYTPRQW >gi|197324944|gb|DS990230.1| GENE 89 102413 - 103699 1629 428 aa, chain + ## HITS:1 COG:FN1355 KEGG:ns NR:ns ## COG: FN1355 COG4393 # Protein_GI_number: 19704690 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Fusobacterium nucleatum # 135 427 5 294 298 162 34.0 1e-39 MLEQFVAVMPGTLGPALLVMCMSVMLTVGEGRDKPISSRWRLWGILIGLVAAIVFAGLRA SAVINQRTFINYPVLWCCVVIDLLLIVLVFVNRLITRNWRRHAAVMHLANLVAALGIALT VFYALPDVILQLTIWVEPGDPIFTSDMLLRALGFVLGIIASAVIAAIFRTMRSTAVRPAF LSAVLVVLVIQLMQHLTGLLQIMQARTLRFPHIAFVMLAWLINNKSGLIMAQAFIFLIPA VASVVAGLRMPVSAKRLAADVNAATVRKHKAFRRRAIAAAAWSMVAMIGVAATLTLGVAA INQQPTLSPPEAYSLKDGVATIPFGQVEDGHLHRFEYKAKDGTVMRFIIIKKNGGAYGIG LDACENCGDAGYYEKDGKIICKKCEVAINLATIGFKGGCNPIPFPYKTGSGKITIQTADL DALSAHFQ >gi|197324944|gb|DS990230.1| GENE 90 103720 - 105021 1662 433 aa, chain + ## HITS:1 COG:FN1354 KEGG:ns NR:ns ## COG: FN1354 COG0577 # Protein_GI_number: 19704689 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Fusobacterium nucleatum # 1 433 2 428 428 342 42.0 1e-93 MFFLRMIRRSFTRQLRRRLLIALTVCLSATVSVSMLGVVFDVGDKLNAELSTYGSNITVQ PKSDAVVSDLYNMEGGPQSDADPTSFLKESDAAKIKTIFWAFNITNFAPQLNVHAQVNGT AAAVVGTWFNKTLKLASGETTVVGVDGMRSWWKLDGSWPKDDTDQGVIGTTLAQQLGVGR GDTVTLRKTTAAGNTHEQKIRITGVYDSGDDDNSAIYISSSVAQVLSDLPDSVDKIEVKA LTTPENDLARKAAQNPAALSQDEWETWYCTAYPSSIAYQIEEVIPGAVAKQVRQVAALQG NVLQKTQAVMILMTVLSLLAAAVAVANLMVASIGERSSELALLKAIGATDGAVSRLMMAE TAAISLLGAIVGAALGSGVAQIIGQVVFGSGITMRPMVFVLVFVLLALTVLLASASSIRS ILSLKPAEVLHGR >gi|197324944|gb|DS990230.1| GENE 91 105081 - 106349 185 422 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163788031|ref|ZP_02182477.1| 50S ribosomal protein L9 [Flavobacteriales bacterium ALC-1] # 300 422 292 413 413 75 30 3e-12 MLLSAVFRRRSRAVMAVVASLVGAATLFCLAMICIAVPQQMNQEMRAYGANLIVTPLADS ENSKSGIDDAMVEHTTEMVSAKGSEKHATYRYENVRVNAAPYVMAGVNPAQVRNLNHHWV VDGSWPSTGKVLVGRDVADAMGLKVGGSITIGYRASDNAASSGQASQSGTDGTDGTAQSG TDGTSDGQTSSGSTGAQQTQNGHVSSDIMDTSGTEFRVAGIVDTGGSEDSIIYALAGDVD KLTGSTRGVDVIEYSSGASDLTALVNSINDMTSMHVKAQQVTKITASDTRVITMLQTLFW IVSLVVLVFTLVGVGTTISSIVSQRRNEIGLRKALGASSHAIGVEFYVESAVYGLLGGLL GTATGYGMARWLCATVFERSIGFNWWLAVVSVVFSALVAVVASIPPVHRATRIDPAVVLR EE >gi|197324944|gb|DS990230.1| GENE 92 106372 - 107178 1181 268 aa, chain + ## HITS:1 COG:FN1352 KEGG:ns NR:ns ## COG: FN1352 COG1136 # Protein_GI_number: 19704687 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Fusobacterium nucleatum # 2 215 5 218 224 283 61.0 2e-76 MDMLLELDHISKIYGDLHAVDDLSLTVPQGEWLAIVGSSGSGKTTLMNMIGCMDTPSKGS VSLEGRKLEDLNAGQLADVRKNLIGLVFQKFYLVPHLTAVENVMVAQYYHSVVDEKQALE ALKKVGLKDRAHHLPSQLSGGEQQRVCVARALINNPKLILADEPTGNLDEKNEKIVLDLF RQLHDQGTTVIVVTHDALVASCAQREIMLNHGVLVGEKWNDKNAHDAYVAAGGKPASTGS DAEGAQHGDSSIDFIDPTKAAKTGGDHE >gi|197324944|gb|DS990230.1| GENE 93 107171 - 107749 749 192 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1663 NR:ns ## KEGG: BBIF_1663 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 192 1 192 192 281 100.0 2e-74 MSDGSALQHDGLADGGSPSKSRTLKSVTVAAAGLIAATTLLAGCGEPKAAPMNDEYAGNS GETEKSQESESQSSSGSDSSSKRKSTTSDKKDTGNYKDGTYSINGQYGPVGEDSIDVHLT IADQKVEKVEIVGHPFTTISKNHQNDFAEAINGVVDGKPLKDLKVDKVAGASWTSDAFNK ALEVARQEASIQ >gi|197324944|gb|DS990230.1| GENE 94 107766 - 107969 135 67 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALGWHGMSPKRHCRIRGAEAHDITIIMYDCTCCYSNNRVLCDKIMMSWDAVSLAVMGAA ASGGIRR >gi|197324944|gb|DS990230.1| GENE 95 107978 - 108685 1073 235 aa, chain + ## HITS:1 COG:BS_yydK KEGG:ns NR:ns ## COG: BS_yydK COG2188 # Protein_GI_number: 16081065 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 5 228 4 227 236 145 33.0 8e-35 MAQDYRELATTLRGRIDAGEFRQTGKLPTEDQLIEEYQTTRYRVRNAIAVLAEAGDVFPV RGSGVFVREDREGDYLSIGTTRGISAEYPHRKVTSVVQELSLLQADSVLAKRMHCAEGDQ VWRVVRLRQVDGNPLAYETAWYLKEFVPFINEQIAEGSLFGYARNDLGLNFGFVDKVLYA GKLEADAARVLGLNEGDPALYLEDDAFLTNGRLFNSSFIAYHYVNARFFTMTSMR >gi|197324944|gb|DS990230.1| GENE 96 108990 - 109388 522 132 aa, chain + ## HITS:1 COG:Cgl2568 KEGG:ns NR:ns ## COG: Cgl2568 COG0561 # Protein_GI_number: 19553818 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 1 132 140 269 271 107 46.0 5e-24 MIFDGELHRDDVNKISYVLGSYQDFLDTRGRFPDLESGTWGGGGATALFGDLGVKGITKA HAIDRLLAHLGANRQDTVAFGDAAVDIPMLEYCAVGVAMGNGSEDIKAMAGIVAGDVEED GLARAFERLGLM >gi|197324944|gb|DS990230.1| GENE 97 109674 - 111014 2315 446 aa, chain + ## HITS:1 COG:CAC0386 KEGG:ns NR:ns ## COG: CAC0386 COG1455 # Protein_GI_number: 15893677 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIC # Organism: Clostridium acetobutylicum # 4 446 3 450 450 351 41.0 2e-96 MKERFTNVAQKTLDVFVKFASTKAITALKDGFVLSMPITLVGSIFLLIANLPITGYTDFM ARIFGSDWNLGLNQINNSTFNVLAMVIAVGIGYSYARNEKMDGISCGILTLVSFLIVSPS TLTVTSDTIKALGGDTATISNVLPNTWMGGNGIISAIIMGLIGSWVYTTCIKKNLRIKMP DAVPEGVSNAFSAMIPGFFIMCYSAIIYQVCQVFGGVSLTELIFKIIQTPMQGLTDNWAG AIIIVLLMSLLFWCGLHGPNIVSGIIYPVLTANSLVNQNLMDQGIKATQANGGHYLVPQL IDCFCKFGGVGLTLGFIVAALLVAKSAQVRELSKLSLVPGIFNVNEPMIFGLPIVYNPIM LIPFICAPLVAVILTYGAMVIGFLPAFGAMQVPWTTPPIISGFLLGGWQGVVIQVLIFAA SIAIWFPFVKMQDKICLKQEQDAAAE >gi|197324944|gb|DS990230.1| GENE 98 111418 - 111717 566 99 aa, chain + ## HITS:1 COG:CAC0384 KEGG:ns NR:ns ## COG: CAC0384 COG1440 # Protein_GI_number: 15893675 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIB # Organism: Clostridium acetobutylicum # 1 99 2 102 102 94 46.0 6e-20 MHIVLCCNQGMSTSMLVKKMREAAVKNGVDVQIDAYPISEIEEKAPDAAVILLGPQVRFE LNRVKGLFPNIPVESINPQDYGLVRGENVLNHAIELAGK >gi|197324944|gb|DS990230.1| GENE 99 111865 - 112194 479 109 aa, chain + ## HITS:1 COG:lin2908 KEGG:ns NR:ns ## COG: lin2908 COG1447 # Protein_GI_number: 16801967 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system cellobiose-specific component IIA # Organism: Listeria innocua # 9 108 3 102 102 87 44.0 4e-18 MADAPETLDMEVLCMQMIVDAGSAKSDYMEALQAVKAGDYETAAAKMKSGDEQYAAGHEQ HAKLVQQEAAGDPVTMSLLLTHVEDQMMSTETVKLMVTELIDLYRKLNG >gi|197324944|gb|DS990230.1| GENE 100 112256 - 113689 2363 477 aa, chain + ## HITS:1 COG:STM3051 KEGG:ns NR:ns ## COG: STM3051 COG2723 # Protein_GI_number: 16766352 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase # Organism: Salmonella typhimurium LT2 # 1 477 4 477 477 623 59.0 1e-178 MGFPENFLWGGAVAAHQLEGAWDVDGRGPSICDVLTGGAAGVARKITDGVIDGLNYPNHR GIDYYHTFREDDALFREMGFKCFRTSISWSRIFPNGDEEEPNEAGLKFYEELFSDYRAKG MEPVVTLSHFEMPLHLAKMGGFTNRKVVDCFVRFATTVMERYKDLVTYWLTFNEVDNQMN MHTPIFPYTNSGIIPNPDDTPHEVEQKVWQAIHNEFVAAAIAVKRGREINPDFQIGCMLS FVPIYPETCRPDDVMLAQEQMRKRYLFGDVYVHGEYPRYLLKWWERDGIDIAMEPGDLDA IKDGIVDYISLSYYMSVAVSSQGSTLDAMEHGLDGLVPNPYIKATDWGWQIDPVGLRYSL CEMYERWNKPLFIVENGVGMYETPDGNGYIADDSRIEYLKSHIAEVKKAIDLDGVPVMGY TVWGCIDVVSFTTGEMKKRYGLIYVDGDDEGHGSYKRSRKKSFGWYQHVIATNGEEL >gi|197324944|gb|DS990230.1| GENE 101 113794 - 113985 260 63 aa, chain + ## HITS:1 COG:BH0497 KEGG:ns NR:ns ## COG: BH0497 COG0561 # Protein_GI_number: 15613060 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Bacillus halodurans # 1 60 183 242 247 64 48.0 6e-11 MGVPLADTVAIGDSDNDLTMIEVAGIGIAMGNGEQCAKDAADWVADAVDTSGLAHAFERL GVV >gi|197324944|gb|DS990230.1| GENE 102 114050 - 114586 479 178 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1654 NR:ns ## KEGG: BBIF_1654 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 178 1 178 178 318 100.0 8e-86 MEHDSYTDVGGIAVMTSKQNNYLREREKANARSPFSKRTPERVIMCAGAVYSVGMAIFFA LSYFGVISSTSEAARTSAQAVTALSRNSSNTALIILYAIVTAGVAAVTIYMAVKHMQPGP RFKWTVGWMIFVMVFSLFTADMVGLIAFGVAFGMYMTRDWQLLRAVNAANAGKRSSKR >gi|197324944|gb|DS990230.1| GENE 103 114590 - 115876 1660 428 aa, chain + ## HITS:1 COG:L191765 KEGG:ns NR:ns ## COG: L191765 COG4905 # Protein_GI_number: 15673533 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Lactococcus lactis # 221 382 3 160 235 71 27.0 2e-12 MASDTTSQRRDGQELAADVDALANQAVLADVEQEAKSHSGKDAADRRLPLIARVYGVLVL LQGVITLPVIVLMAGYSVHEILDGRVTVDVLNLTFILTCAQTVVSSANAACLTVLGVLLI RNRRRYSAWWSYIVMMVTFAEGLLSLALDGLGANLLVPSIQMTILVALAITLDPTLLEER RLQRALRRMDERDEYEAALAKGMVGRDMSGKGYISLDFFNLFWIFVIGCMIGLVVETIYH WYYYGEYQDRAGMLWGPFSPIYGFGAGFMTILLNRLWRSNWVLIFFSSALIGGVFEYCSS WFMEVAFGIKAWDYTGEWLSIGGRTSGKYMVFWGIMGLAWIKFVLPYLLKFINLIPWKVR YSLTAVVFVLLFIDGMMTLMAFDCWYGRMAGHALDSPITQFFADHFGNDFMANRFQTMSI DPSRAGRM >gi|197324944|gb|DS990230.1| GENE 104 116004 - 116846 938 280 aa, chain + ## HITS:1 COG:lin2453 KEGG:ns NR:ns ## COG: lin2453 COG0561 # Protein_GI_number: 16801515 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Listeria innocua # 1 280 1 281 281 113 28.0 4e-25 MSSKLVFLDIDGTLADERHEVPISAQEACKAARSRGHKLFICTGRSMPKIERGILDLGFD GVISVAGAQADVNERVLFRHDIAPEAIDAATAYFERHGIENYQWQGADGMYISCGYARHL ESKGSAVWKNGQFARYWHLIDDIAVPDGSTLGHVIHASKGSYFSGADPDVSFDDVSRDLG EWFTLVHGSYDDISPNNGELLINGVDKGTALCDVAKDLGYSIADTIAIGDSDNDTAMLKA AGTSVAMGNATHGIECFCDMTTTDIHDDGIANAFVTLGLI >gi|197324944|gb|DS990230.1| GENE 105 116756 - 117025 176 89 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1651 NR:ns ## KEGG: BBIF_1651 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 89 34 122 122 147 97.0 1e-34 MAQSLRGSPPGPATTDVLRTTILLLACQLDFAYKQLRCLLNGSARQRGGARRQSPRDALN QIRPRVTKALAIPSSWMSVVVMSQKHSMP >gi|197324944|gb|DS990230.1| GENE 106 117227 - 117430 122 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MKKSATCKSSSHGFRRVLVILMISECWISTRAMNRRKEAPPIRPLLGSKVNGKQKVPGNA DFQGLNR >gi|197324944|gb|DS990230.1| GENE 107 118274 - 119254 802 326 aa, chain + ## HITS:1 COG:SPy0135 KEGG:ns NR:ns ## COG: SPy0135 COG3764 # Protein_GI_number: 15674348 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pyogenes M1 GAS # 87 267 26 200 251 166 48.0 5e-41 MPASSKTIVRGWGAVLGLEDVRKACDARRRASFRGRLLSVVSVALVVSGLVVVSVPVMLQ SRSAGEQSATSDRLEKTVAGWPYPRAENELKEARAYNRDLASHGQYVLGEAKDPFTQTKG SVSDKRYLSMLDAGGGVMGSVTIPKIGVDLPIYHGTSESTLELGAGHLYGSSLPVGGKGT HAVITGHRGLVKALMFTRLDELKKGDSFYIKVMGETLGYKVDRVSVIEPSDVSKLRIVED EDRVTLMTCTPYGVNTHRLLVSGLRAAIPAEVPDESQVIDPRPVPLSVVAAYVLAALCIP LLFTRDSDPRRHSSGVKSDSVLGRKH >gi|197324944|gb|DS990230.1| GENE 108 119330 - 120445 1197 371 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1708 NR:ns ## KEGG: BBPR_1708 # Name: not_defined # Def: cell surface protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 359 6 364 745 675 98.0 0 MVLALSVGGTASGEDMPAGTSSAETAVKSAGKTGEITFPAGSYIVDMGDTFSDDAQLKPY GLIYDLVLNAKVPVYWVINGSKTSQTGVDLTYNGRNYISGPFVISGDDVDYNVRSMLFKW RGYGVRIDGPTDTAVTVDNSRKISSVPRVVLDKQNGDIAKKYLVKSGILRNENASDDRVY KEKATPADLDFSCDDIYVMPHAEPTTATHSPLASFNKGGGYIWAGCHAVSYLESNTKGKG VDDGSMFFLSTNGLLIGDKHKGASGVSGAYQVAGAASDPIMQFVGNTFAAHANGAEEIYM PAPGSAWRATTRVLETDPNQRQVLAGMSPGPAVFMAVGPGYGDYGNGMVMYEAGHEFKKT PTPTATPYERS >gi|197324944|gb|DS990230.1| GENE 109 120484 - 121584 1211 366 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1649 NR:ns ## KEGG: BBIF_1649 # Name: not_defined # Def: cell surface protein with LPXTG anchor # Organism: B.bifidum # Pathway: not_defined # 1 366 391 756 756 622 97.0 1e-177 MKATIPSDATAGSTVQASVTVTKGTPPYTYQWQSDCNASFSDPTGSATSITFPNEGPCHV KVTVKDQCGRATFDTRLVDVKTRKGTVSWRKTDTENNPLAGSSWTLTGPDGQSRTITDNG DGDEDRTDGSFRVTGLDMGAYTLTDSQAPSGFHKDDSSHPFTLDNTHPDWTFTSGFVNSP TPATVTVNGSKTLTGRDSKNGETFRFTFIPSDQATRKAVSDKTITVSGIRSVGGLRDGVA KDFTLATATVAKAGTYTFYAAEDRTDCPGDLACSKAGYRITITATGGTASSGALTVHASI AKTKDDEGNTADVTGIAKAAFTITRVAQSALPLTGASEARNNTMLGLSVIAAALVLAVLG AKRSRA >gi|197324944|gb|DS990230.1| GENE 110 121675 - 123339 2627 554 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1707 NR:ns ## KEGG: BBPR_1707 # Name: fimA # Def: fimbrial subunit FimA # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 554 1 554 554 861 100.0 0 MKLTKITAMAAAIATVAGLGAVAASSANAQVVTDGEKTITLNATSADQLTGHTFKVVKVA SYDVYGTAPNQSVTLKTEDGLKKDIADYLKYTGTGDPLAWAQQQDQAKLDKSTTSPWLGD GTTRGLADKLASKATTTVTSTLSNENKQATFTLDSPGLWLIVDQVVTGKSSKALPILAGT KLTINNTVYSSGSIDMKNQTASVSKTVTDQTVAAGQDASYTITTKVPNYVGYKVNGYQFT VSDKFAHNAPLSYKTDTLKVTVDNKQLRAGTDYTVAGFDATSKTFIIDLSGYIKAKGFKG TPVDDSKFTDADLVGKNVTVEYKATVTGSTGNTGAANTPTIKYPNDPSNNESKQEVPGTP VKVFNFDYTLVKKDKTTGAALEGAKFAIKNAAGKYLAYTRDQDGNGKWITLDTKPESTAD GTLSGVFTTDPNGKVTFTALDEGKYTIEEIAAPNGYVNVGVSFSFTIAANLSGTGADQTA KPSYTIDADGVSSDRWGLVSDGSTAEVVVENVKSITQLPLTGGAGTVLFTVVAALLIGAG VTVGVKSRKASTIA >gi|197324944|gb|DS990230.1| GENE 111 123757 - 123885 75 42 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MKKEPKIPDVVEAMGVRSINLREFYDASGDLIPLPYPIRPTL >gi|197324944|gb|DS990230.1| GENE 112 124303 - 124641 301 112 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1705 NR:ns ## KEGG: BBPR_1705 # Name: not_defined # Def: regulatory protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 112 42 153 153 226 100.0 2e-58 MCILDYLKDHDGASQRAICEYTLLPRQTVNNVIASFVAHGFVELGDAEGDRRVKTVRFTP AGRRYCNSLIAPSRAAEYRAMSELPDELRSALLKGMGVYGRVFRKQMHDISV >gi|197324944|gb|DS990230.1| GENE 113 124745 - 126502 187 585 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|229849245|ref|ZP_04469311.1| LSU ribosomal protein L17P [Thermanaerovibrio acidaminovorans DSM 6589] # 336 550 127 340 398 76 27 2e-12 MRLVARFMKPYWALCAVTTVLLLVDVVGALVIPTFAAELLNESATSASFKKMTITAVGMG VAALISGMCAVAGGWCCSQLTSRVGKDMRMALYRKSMDLSIYDFRNFGTASITTRTINDV VNIQMAMTNVLCMLMPVPIIFIIALTLSFRLDVTLSLWLLVAIAFVCVVALFIMRSAAPL FRKLQKLLDRIGAVLLENLTGVRVIRAFNKESHERRRMDGTFVDYADTSIKANRLFANLD GLSYFGMNAFIVVVYFLAGGRISAGNFQIGDITAIVEYAIMALFYLMMAQMVIITLPRAL ECCERVRLVLDHSPQIADPEPGAAVDMSGRGPLPDGEVLAFRDVTFRFADAQEDTLRHVS FSCKTGQTTAIIGGTGSGKSTIAMLALRFHDANWGEVTLDGVDVRKMTQHDLRRRVSYVQ QQAWLFSGTIADNLRYGDRDASDERLNHAIDVAQAREFVDSLPQGLESRVAQGGTNFSGG QKQRLSIARALTGDTQLVVFDDSFSALDFKTDAALRHALAAETNGRAVLIIAQRVSTVQH ADQIVVLSDGQVAGIGKHDELMADCEVYREIVESQTKEPAMGEEA >gi|197324944|gb|DS990230.1| GENE 114 126508 - 128376 201 622 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 389 608 8 228 245 82 27 4e-14 MTTQNDDMAETVVNAGDTVKTDDIELEAPKNAMATARRLFVQLGNQRMRLCVVAASILLF TFFHIAAPMYSAVVVDSIWDAVQGAWRDGVPFSVSWNAGGIGWTILILAILYLGEWGFYY LQSYLMASVAENLNLTLRKQISAKIQRLPLRFFDRNKPGEVLSKVTNDLDRISEVMQTGL LRLITAITTVTGSLVIMVYYSWLLTVVFLVFMALSMWVTKLVARKNLEIASLRQETIGEL TGLAEEYYKGRNIIKAYNREEDSAAAMEDAAERTRKAAQLADFITISVNPLIRMIARFSQ MAVMLLAGWMVLGGRMTVGVAQAFYQYINQVSEPLTEASYMINSLQSALASAERTFELLD EEEERPDPQPADAAKVAEEPVRGRVVFNHVRFGYDPQRPLMKDVNFVAEPGQKVAIVGST GAGKTTLINLLMRFYEIDGGAITLDGVSTATMTRGDLRREFGMVLQDTWLFGGTVAENLA YGRPDATREEIIAAAKAVRADYFIRTLPHGYDTVLDNEAGNLSVGQRQLLTIARVFLADP PILILDEATSSVDTRTEAEIGKAMTRLMAGRTSFVIAHRLSTIRDADLILYMEHGDIIEH GNHHELLERGGRYAALYNSQFA >gi|197324944|gb|DS990230.1| GENE 115 128419 - 128868 353 149 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1702 NR:ns ## KEGG: BBPR_1702 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 149 1 149 149 290 97.0 2e-77 MVPRHGAPRQESAGVETAAGEADGFIIDWLAGPDRSLGRYRYRLDRTIAKGLEGKPCYVF HATDAPAGCPFSVLVAMDPMPERAALASGGLLSHLHFQYANDDGMLLRAESTLRKRMWYP TMCADEGTLRDQCDIVRTLHKLPPLDREA >gi|197324944|gb|DS990230.1| GENE 116 128955 - 129362 139 135 aa, chain - ## HITS:1 COG:SPy1788 KEGG:ns NR:ns ## COG: SPy1788 COG0619 # Protein_GI_number: 15675627 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type cobalt transport system, permease component CbiQ and related transporters # Organism: Streptococcus pyogenes M1 GAS # 1 106 87 192 226 65 33.0 3e-11 MMPCFITGAYAFSTTRVSEFVCALRRMRVPESVAIPCMVVIRFFPTIGRDYRRTRDAMAL RGLASGRLALLRHPAQSLEFVLVPLLMNATIVSRDLSVAALTKGLGRFGRHTCITEIHSV GLIGRRWRSARSRWH >gi|197324944|gb|DS990230.1| GENE 117 132073 - 132342 163 89 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1700 NR:ns ## KEGG: BBPR_1700 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 89 1 89 137 140 96.0 2e-32 MNSRATFESSHAGRIGAYAAGADGMSRSKSAPAPAAVILGPRAKLYLMLLANTLLFFHAD ARAEALLTALFLTPLFLAGRWRMGLRLTS >gi|197324944|gb|DS990230.1| GENE 118 132339 - 132872 371 177 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140730|ref|ZP_07802923.1| ## NR: gi|313140730|ref|ZP_07802923.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 177 1 177 177 348 100.0 1e-94 MRLYSNHDRKAAITEPLLLFSLKPGFPAGLSLFPRPSIAVSHFTKTRVEIAVLDNSPCQI AVFGPQNGDLTRGIADFGYFNPYCGAPAHASRQGIAIGAVCLARPPDRTGGKPRRGRHRT SEPLRQADIPDLINIGVFSALYFALVADLIAKAGKYSSKIGMLISYVVFANINTDTS >gi|197324944|gb|DS990230.1| GENE 119 132833 - 133084 161 83 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIVAPLQLADFPISNVVHDMPTTVGAGLTIVHQRDGCGRKNCGRPNIMSSQPNTQGFTRI FQVNHMTCPETCVYIVITTARPQ >gi|197324944|gb|DS990230.1| GENE 120 132996 - 134570 1648 524 aa, chain + ## HITS:1 COG:SPy0713 KEGG:ns NR:ns ## COG: SPy0713 COG4690 # Protein_GI_number: 15674771 # Func_class: E Amino acid transport and metabolism # Function: Dipeptidase # Organism: Streptococcus pyogenes M1 GAS # 12 521 9 472 472 473 47.0 1e-133 MVRPAPTVVGMSCTTLLIGKSASCSGATIIARNDDSGSGRYDPKRLVAVAPTDQPRHYRS TLSHVEIDLPDDPCRYTIAPNVLPNRGVLAEAGASERNVAMSATETIAVNERVLAADPLV ELRPAEGVPGEAGYRPETPGGIGEEDIITLVLPYVSSAREGVERLGELLERYGTYESNGV IISDVDEIWYVETIGGHHWIARRVPDDCYATIPNQLGIDDFDFSDAFGERRFFMCSADLR EFIDRHHLGRAMRPAQGAGFGVAAVLPDHINPRVVFGTSTVKDHIYNTPRAWYMQRHLNP SEDWDSPAARYTPTSDDIPWCRAPENKVTVEDIDFLMSSHFEGTPFDPYGTLGTPESRHR YRPIGINRTGHMVAIELRHDVPAAAAAVMWIAFGSGPFTAVAPFYANVDDTPAYLRDTTP EVSTDNLYWTNRLIAVIADAHWYETRNAIEYYGEQVRAFGRRLVEETDAALVDAEAGDIR AALMAANETMAGRLQDLTHKLLDNVLYTSSNLMRNSFAMSDRWV >gi|197324944|gb|DS990230.1| GENE 121 134728 - 136632 1683 634 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1698 NR:ns ## KEGG: BBPR_1698 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 2 634 1 633 633 1324 99.0 0 MMQFTMSGTMLRFDETTLRFSFSRDGATWSGCDGIEPQLTREDRSFSFAGAATVTHERIE TGTGVGVRSVFAGFAGADYAFETYIWIERSSGDVLCEWVPLRECGAEPRIDRVLWPAPLS FDHADAHDVTLITHEQGVMIPNNWPTEVGTDAVSFGGRFETAGGYMPWFAQLRSDGHAYI AICETPWNAGYDIDHPAGGPYTHVGMWFEPSLGRMDYRRVVRYRLLDHADHTAVCKTYRA YVNERGRLRTLAEKAARNPSVRDLLGRSWVHVGIKTKVQPDSSFYDPAQPGKNDSLVTFA QRERQMRTLHEMGAGRLYLHLDGWAQPGYDNGHPDYLPACREAGGWKGMKSLVDACHEQG DLFGTHDQYRDYYFAARTFDPRNAIRLADGTMPEHAMWAGGRQTYLCAELAPDYVRRNFS EIATHGIALDCAYLDVFTCNEGDECSHPEHRMTRRECYERRAECFEYLLAHGILTSSEEV SDWAMPSLVFCHYAPYDFQMRSPDAPRHGIPVPLYNLVYHDCVIQPWMMDRVAGGDDYML YALLNGGAPYLIRDAAYAGMDGDMNAALRARTENDIERCAVVAGLHRRVGMQELVRHDLV GGDPLVQRSVFADGTAVTCDFHAQTYEIAANGSH >gi|197324944|gb|DS990230.1| GENE 122 136696 - 137730 1291 344 aa, chain - ## HITS:1 COG:CAC1488 KEGG:ns NR:ns ## COG: CAC1488 COG0463 # Protein_GI_number: 15894767 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 6 344 2 338 338 272 38.0 7e-73 MEQSSKTLTFVVPAYNMETYLERCVESLLSATDNSDIEVLIVDDGSSDSTPELADMYERR WPGNVRAIHQVNKGHGGAVNTGIANATGMYVKVVDADDWVDMPSIDTLMGTLRVQRVATD PVDMIVTNYVYDKVGKRVKHTVNFRHAMAANTVLGWDDLGCFGVAEYILMHALIYRTQVV RDSGMQLPEHTFYVDFIYAYQPFPWVKSMLYMDIPFYHYFIGREGQSVQTDVMIRRVAQL RLVNQRMVEATPEPGTVPDGLYRYMIHFLAIESSVTSVFLILSKDKANYRLKDELWADID KASPAIGRDVRRKLVSRALNLRGSVGRWVIRRGYVVAEKVVGFN >gi|197324944|gb|DS990230.1| GENE 123 137898 - 138662 1050 254 aa, chain - ## HITS:1 COG:MT1047 KEGG:ns NR:ns ## COG: MT1047 COG1309 # Protein_GI_number: 15840447 # Func_class: K Transcription # Function: Transcriptional regulator # Organism: Mycobacterium tuberculosis CDC1551 # 5 205 4 202 202 195 49.0 7e-50 MANTARMTALQRREQLIRVGRALFASKGFEAVSVEEIAANAKVSKPIVYEHFGGKEGLYA VIVDREMRELTNALIEALSDTKAHPRQIVERAALALLTYIEENSEGFQVLVRDSPTTDPA GSFNSLLGDISLRVEDLLTAAFKRRKLSAKGVPYYAQMLVGMTVFTGQYWADRPKVNKEQ LAAYVVDLAWHGLSRLDSKPILRFESQKAKQLAAKEDKERRDKERSETTVPDEPDAPVET AEPDEPAYLPASAD >gi|197324944|gb|DS990230.1| GENE 124 138776 - 139072 137 98 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1636 NR:ns ## KEGG: BBIF_1636 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 98 1 98 98 188 97.0 7e-47 MKTYVAPSMMASEFDNHDIVSCVSCLIRVFGGGREYYHDEGGAPLPDLLYVEYHGTAGNP VPSGMPLYALVADLPIPASSPVRYVGTTQGQRLCQQPN >gi|197324944|gb|DS990230.1| GENE 125 139148 - 140389 1696 413 aa, chain + ## HITS:1 COG:ML1628 KEGG:ns NR:ns ## COG: ML1628 COG0552 # Protein_GI_number: 15827857 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Signal recognition particle GTPase # Organism: Mycobacterium leprae # 60 412 86 429 430 281 51.0 1e-75 MDTNLIIGIVAAVVIVVLLIVWGVVRGKSRKNEVVGRPAETATSPRQAGRAGEEPETVAA TVDRQLSAPETEGETASPRSEEERKPVEPTQAAPAKPAAPAYDVPEESGSRIQRLKAKLS KSSNPFGKALFNILTKDNLSESDWEDVEDTLLLADVGAEASEQLVGELRRDARITGKASP DEVRATLRDNLLDLVGRDTDRRLNVDKPDAHKPGVIIMVGVNGTGKTTTAGKLARLFVSE DKKVVMGAADTFRAAAADQLETWGARVNVPVVRSDKDGADPASVAFEAAARAKEDDADVL IIDTAGRLQNKSNLMDELGKIRRVTEKNLPVDEVLLVLDATTGQNGMAQAKVFAEAIGLT GVVLSKLDGSAKGGIVISVQKELGVPVKLVGLGEGPDDLAPFDPEGFVDGILA >gi|197324944|gb|DS990230.1| GENE 126 140684 - 141982 1622 432 aa, chain + ## HITS:1 COG:Cgl2012 KEGG:ns NR:ns ## COG: Cgl2012 COG0004 # Protein_GI_number: 19553262 # Func_class: P Inorganic ion transport and metabolism # Function: Ammonia permease # Organism: Corynebacterium glutamicum # 3 422 26 450 454 382 55.0 1e-106 MDSGNTAWMLTSAALVFLMTPGVAFFYGGMVRAKAVLNMLMLSAAALSVTAVVWTLWGWS IAYAGSSIGGIFGDPATGFLLKDTMVFDAGTRQYTAAGLAANGNKYPSSVDVSFQVTFAM ITVALICGAIAERVKYSTWMLFVALWVTFDYAPMAHMVWNNGLLSAKGPISTAIGAAAHD FAGGTVVHINAAMAALIIVLIIGKRKGFGTQPIRPHNVPFVMLGAFLLWFGWFGFNAGSA FAANGTAGYAWMSTTAATAAAMLAWGFTERIRTGHYTAIGAASGIVAGLVAITPAADVVS PLWAMVIGAIAGVLCCFACGLKFKLGYDDSLDVVGVHGVGGLTGTVLIGFFGEGTGLLAG GDWRQLAVQVIIALCAMLYSGVVTAIIAFALEKTIGWRVTEAQEVGGIDLADQGECAYDF AGTASSVLKEVR >gi|197324944|gb|DS990230.1| GENE 127 141984 - 142322 515 112 aa, chain + ## HITS:1 COG:MT2987 KEGG:ns NR:ns ## COG: MT2987 COG0347 # Protein_GI_number: 15842462 # Func_class: E Amino acid transport and metabolism # Function: Nitrogen regulatory protein PII # Organism: Mycobacterium tuberculosis CDC1551 # 1 112 1 112 112 134 62.0 3e-32 MKLITAIIQPHKLDDVKEALAAAGVHGLTVSEANGYGRQRGHTEVYRGAEYTVDLIPKIR VEVLSDDADAETLVGVIVKSAGSGTIGDGKVWVAPLDSVTRVRTGETGSAAI >gi|197324944|gb|DS990230.1| GENE 128 142602 - 144473 1640 623 aa, chain + ## HITS:1 COG:MT2986 KEGG:ns NR:ns ## COG: MT2986 COG2844 # Protein_GI_number: 15842461 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: UTP:GlnB (protein PII) uridylyltransferase # Organism: Mycobacterium tuberculosis CDC1551 # 59 606 56 570 808 243 34.0 6e-64 MSSAVDHLKQRFMDMSQPDADGVYRGGSAKRRARTELAMDCLRRLWSDAVAAVPFDVPST GIGFGAVGSLARGQIGPSSDLDLVIIYEPHTINDQQLNELTNKLWYPLWDSGLDLDQSVR TRQQCEAVTDSDLPAAMGWLDVKPIAGDTALISATATSILERWRRAVRKRLPELLNSARK RLDEFGRLAYLNQPDIKEARGGLRDSVLVSALTVSWLADRPHGRYDDEVEALLDVRDCIH LAAGKDANRLLAPYQAQVAAMRGLADPTLPPGEREARSIEDLQTRLARIGRQIAFALDST ASRAEHSLTHERPRFSFFQMLSPRGGGRREAPKFEQVAPGVAKHEQEIVLAPGVEPEPDR YLPLRVAAAAAEFELPISPVTLQNLRRCPIRDSVWDDESRQLFVRLLASGPALMRVWEEL DFVDIPGRWMPEWLGIRNRPSASAAHRYTIDRHSVEVTSRLARVSAARGERYDDRHYTAL LLAGLLHDVGKRPFVTDHAAEGARHAAVIMKRMGFDADIARWVRILVREHLTLSEFATGK NPNDPAVGESLARCVDRDPMLLDMLYDLTRADGSSLGATAGEEISKRYGWSHWRESLVRA MYSAARESIRVQVEGGYADVDFG >gi|197324944|gb|DS990230.1| GENE 129 144819 - 146225 1313 468 aa, chain - ## HITS:1 COG:Cgl1936 KEGG:ns NR:ns ## COG: Cgl1936 COG0534 # Protein_GI_number: 19553186 # Func_class: V Defense mechanisms # Function: Na+-driven multidrug efflux pump # Organism: Corynebacterium glutamicum # 33 411 17 390 435 142 31.0 2e-33 MSYSVHVHTPDPQSSDPATAGTARTGNRAAYGRILALALPTFGQLIAEPTFVLIDTAIVG HIGVSALAGLSIGSTIILTAVGLCIFLAYSTTAQVAHLLGAGRRREGLQAGIDGLWLALG IGIVLAAALFAGARPLCVGLRGTGETLDQAVAYTQTVVLGAPGMLLVYAANGIFRGLQKV RITLVAAVCGAVLNTMLDVLFVFGFGWGIAGSGAATMIAQWFMGLFLTVPAVLWAKADGA ALRPRLSGIAAAGGDGLPLFIRTLAIRAAMVMTVASAARLGTTVLAGFQAVNSSWNFAMN MLDSVGIAGQTLVGAAMGAGDRARTLRLTRATGRAGLAAGAAIGCGFAVAGLFVGRLFSP NPHVQLLVAAGMVTMGAFLPLQGWMMALDGILIGARDFRYLAITCTLTATVYIALTAICV DAAAPMLPGDLASTVLLWAMFNIVLMGGRGLFNGLRIRSESWLGQTAL >gi|197324944|gb|DS990230.1| GENE 130 146279 - 146449 162 56 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGRRLYRMTTCLANRVGAFMDLSPCYAQSYPPDVDNCICYPQSYPLNVDNSTFLST >gi|197324944|gb|DS990230.1| GENE 131 146627 - 148060 1779 477 aa, chain + ## HITS:1 COG:Cgl2923 KEGG:ns NR:ns ## COG: Cgl2923 COG0305 # Protein_GI_number: 19554173 # Func_class: L Replication, recombination and repair # Function: Replicative DNA helicase # Organism: Corynebacterium glutamicum # 35 469 74 509 510 470 55.0 1e-132 MAAEETNWGGPRPQSGGSYVQGDAGSPGRDAVFDRVPPHDDEAEMAVLGGMLLSKDAIGE VSQMIDVTDFYQPKHQTIYEAIIDLFSNSQNVDVVIVANQLMKDGNLDKVGGADYLHTLV AFVPTAANATYYAEIVHQRAILRNVIAAGTKIAQLGYSAEGSQAEDVVNLAQAEVYEMST GRVKQDYEAIGPVVHDALEQLDKLQNGDLKTGVPTGFRDIDDVTQGLQPGQMVVVAGRPA MGKSTLGIDFARAAALHHNMTSIVFSLEMSKVELAQRIISAETNIPLAAMRRADDITADR WNTLNNFWNKLQNAPLFIDDSPNMSLMEIRAKCRRLKQTNDLKLVVIDYLQLMSSGKQVE SRQQEVSEFSRALKLLAKELEVPVVALSQLNRGPEMRNDKKPQLSDLRESGSIEQDADVV LLVHRPDFYDKEDRPGEADIIMAKHRNGPTETFHLAFLGAYSKFKDMPQDYNSDQGV >gi|197324944|gb|DS990230.1| GENE 132 148063 - 149646 1575 527 aa, chain + ## HITS:1 COG:slr0938 KEGG:ns NR:ns ## COG: slr0938 COG0769 # Protein_GI_number: 16330989 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl tripeptide synthase # Organism: Synechocystis # 39 514 18 453 459 173 30.0 6e-43 MGEENGSQPRETSRETRREALGGQSDAARPWTAFATPLIGKAVRGASRLLRHGGSAFPGK IVEQIDPGFLARTLADLPYGVVLVSGTNGKTTTTRMVASMLETLGLKVFTNPTGSNFTRG VVSALLTEVPLSGRLDADVAVLELDEAYAVKFVQQVKPRFALLLNVMRDQLDRFGEIDNT ARLLERVAEATTGTVVLNREDPRIARFASAVPEGTGVRYFGLAPELRRFFPSDDDMQTTV AEEAASVAGNGRPSANDRAQQEPAGTSVSTEAPDADGREATADVTLTRVGNHEADFLIDG RAVHTAVKLEGVYNLFNAAAALATVRAVMAQDIASAQVAETVPAKTMPGQASHASDAAIS DESPVDSPVDHDRLLAALAEVTPAFGRGETIAVNGSDVQLLLVKNPMGFRLSLGSFPPDG HDTMIAICDLYADGRDMSWLWDVDFTSLRPTGVAMVSGTRAWDMALRLEYDQVRVEQTGT DLEAAVRQFVTARPGVPKHIYCTYTSMLRVRAELAKLTTVADAGVGR >gi|197324944|gb|DS990230.1| GENE 133 149690 - 150439 942 249 aa, chain + ## HITS:1 COG:SPy1034 KEGG:ns NR:ns ## COG: SPy1034 COG3442 # Protein_GI_number: 15675031 # Func_class: R General function prediction only # Function: Predicted glutamine amidotransferase # Organism: Streptococcus pyogenes M1 GAS # 5 216 18 231 263 139 37.0 5e-33 MGKVIDVMSLYPKDMNIYGDSGNVLVVLRRLALYGYEPRLHAYNQGDEWPERVDMILGGG GQDTGQKKITGDLFKQAGRLRDLAADGTPMLMICGLFQLFGEYFETSEGERLDGINVLGA YTVGQSHRMIGNLVEHSDEFGDVIGYENHSGQTFLREGMLPLGHVDHDGTGNNGEDHTEG ARVGNVIGTYMHGSLLPKNPAVADFLIRAAVTRRYGEFEPDQSSEQMFELARLDALADKA RKVAAARPR >gi|197324944|gb|DS990230.1| GENE 134 150618 - 150917 421 99 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1627 NR:ns ## KEGG: BBIF_1627 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 99 1 99 99 121 100.0 8e-27 MADFDLGEGLRRVFLAGVGALATGVELGQQSFEKSQQIVDGLVKKGELTVEQGKALNTEL KHKAQEAKEKAEEKTEGAKEQSDAGAAAEDPSPAEGSAA >gi|197324944|gb|DS990230.1| GENE 135 150937 - 152730 1973 597 aa, chain + ## HITS:1 COG:MA1861 KEGG:ns NR:ns ## COG: MA1861 COG0661 # Protein_GI_number: 20090711 # Func_class: R General function prediction only # Function: Predicted unusual protein kinase # Organism: Methanosarcina acetivorans str.C2A # 90 592 55 558 559 282 32.0 2e-75 MPSYTAGGHAGDPRHDPERGKSASGSDGSAKDGVVTRRAGKRREWDGSPTIGLFNNHRDT FSSRYHLTRRGKVKRLGQIMRIANQFDVVHGLTPVKMRLMLEALGPTFVKVGQILSMRSE ILPQSFCDELAKLRADADPMPYQIVVDTLTQEYGRPIGEVFARIDPTPLGSASLAQVHRA TLVTGEDVAVKVQRPGVREIMALDVSIMRSIARTATKMLPSAQVVDLGGVVEELWDTFES ETDFLVEARNLSEFKRFCEAYRYMDCPKPYMDLCTEHVVVMDYVEGIAVSHTDQLIEAGY DLKEIGTKLVDNYATQVLDDGFFHADPHPGNIIISGGQIVLIDLGMTGRLNSQARSVLRE MIFAVAKQDSAALADGLLRFAGTESNPEDYPALLADLDMVVKEFGTVDLGDLDIAAFLTS LTSLAQRHGIEVPGTVTTVGRALVTLEGLLDEFIPDVNMIQIISDHIAGSKSLDRAAKDE IKALGVEGHQALHGLLSAASESRVAMRMLTRGQLRMNMEVVGSEEPMRLLSDMVNRLTMA LIVVGLFVGSSIVYYAGMKPIIFGIPVVGFMGYVIAFILSAWIVFDIYFKGRRSKRR >gi|197324944|gb|DS990230.1| GENE 136 152798 - 155446 2590 882 aa, chain - ## HITS:1 COG:alr7635 KEGG:ns NR:ns ## COG: alr7635 COG2217 # Protein_GI_number: 17158771 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Nostoc sp. PCC 7120 # 141 764 62 751 753 372 37.0 1e-102 MEFDIFLGVAALVIAAVLTWCILRFFFAPRRGGARATLHDGVQQATITVRGGYSPDIVTM QAGIPITLRFDRKETGECTSHVVFPDLGTDTMLPGNETTEMSLPPLPAGDYPFACGMNMV HGLLRVEGETDSATKPDDGTASTGTAIPAGTPRMSAADALLAERQEAEERRQEIRHTGML VAIGTVLTLPVFVPMMLMLVSHSLVPSWLMNPWLQAILITPVMFYCGAPIHRVGWPALWH RSPDMNSLVALGTTAAYLYSIALCFVSELMPEGSREPYFESVGVVITLVLVGRLLEAKAR EGTGKAVQSLIKLRPRVAHILDVGTPLAKDLAAGKASGDGWLDPAQSQDIDIDRVKTGDL LVIRAGERIPLDGVVLAGEASVDESMITGESVLARRGVGEPLTGATIMQQGNVVMKVTRT GEDTVLSQIIALVARAQATKAPVQRLADRIARVFVPAVIIAALWTGAIWITFGPQPKLAH ALVTAVSVLIIACPCALGLATPLSVTAATGLGATNGVLVTSARALEQARDIRTVVFDKTG TITVGAIDDDADYAKPSYTKDSVKPGSKEAIAALRAAGIRTVMLSGDKAEVAERVAAEVG IDTVIAQVRPDGKAYWIRQLQISRDAAAAQSSVAPAIADVPNGLVAMVGDGINDAPALAQ ADVGIAIGTGTDIAMQSADVTLMSGDLRGVVKTLNLSQATMRNIRENLAWAFGYNIIGIP IAAGVLYPFTGWLLSPMIAGLAMALSSVCLVLNANRMRRVTLSPDTVSFTAAGGRDADRR APDQHGARSIILDTGDRPRADGHHTDEGHHHQPNKEQPMHMNHMHSADMNDATQTATDPV CGMTVAVNNDAITREHDGTTYYFCGEHCANNFMKAPQLFLEN >gi|197324944|gb|DS990230.1| GENE 137 155521 - 155841 382 106 aa, chain + ## HITS:1 COG:MT0200 KEGG:ns NR:ns ## COG: MT0200 COG1937 # Protein_GI_number: 15839569 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 15 106 5 96 96 100 59.0 8e-22 MLSGMFALGGRLVMQGYDGDKAKILARLRRVEGQVHAVAQMVEDDVYCIDVLTQISAATS ALKAVSVMLVDDHLNHCVRQAAAEGGEVADEKLSEVEKVISRLVRS >gi|197324944|gb|DS990230.1| GENE 138 155885 - 157216 1429 443 aa, chain + ## HITS:1 COG:CT825 KEGG:ns NR:ns ## COG: CT825 COG1322 # Protein_GI_number: 15605560 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Chlamydia trachomatis # 109 417 89 382 427 186 33.0 7e-47 MFDEVLDVVIVAVVALLGLAAGFALGKMRGQASARMAKASEVDALRGSCEAMKDDNARLA AQVAQAKAQSEGLLQQLSFAKSQLAQAQQAEQVRVQRERERAEADGLRRREEQEKALTEQ GKVLSALAPLQKNLDELQQKVSNIEEGRKHEMGVLGEQLKGLGEQQARLDRETSSLSAAL RNNKVRGAWGEAQLRNIVESAGLLEHVDFDTQVVMTGVDGKTLRPDMIVHLPGGKTIPID AKVPYADYQRACMIPETAGPEDLERRDELLRSHAKALREHVRALGDKAYWSACDTAPDFV IAFIPNEALLQAAMEADPTLMDDAFARKVALTSPVTLWAVLKSVAYAWQQQSLTDDAKTL FDLSRELYERFAVLGERANKLGTALTRTVTAYNQFASSLESRVLVTARKLQKLDQATVIG SVNIIDPDKSDVREITAPETTPE >gi|197324944|gb|DS990230.1| GENE 139 157350 - 158021 766 223 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1622 NR:ns ## KEGG: BBIF_1622 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 223 18 240 240 411 99.0 1e-113 MNEEQGFRKTGTTGTAVGTNNIPSDASPSQTDDFSMLEPREQLRRLIAAEMEGKPFCELA GVTFDHRGAAIVGHILLDTLEENGYSIDDFDAVGALTAAAVPLVGAMIQAAASRGEDLDG FVMDFVYPSIKGPSIKGKRVVLLDSWLSEKSYVQTSSLVTLRNGNELSLDFGVVEHEGAK VVAIASLIGGVDMTEPVIEVVNPVSGERQELPFIEIYHESELR >gi|197324944|gb|DS990230.1| GENE 140 158024 - 158908 698 294 aa, chain + ## HITS:1 COG:Cgl2714 KEGG:ns NR:ns ## COG: Cgl2714 COG0566 # Protein_GI_number: 19553964 # Func_class: J Translation, ribosomal structure and biogenesis # Function: rRNA methylases # Organism: Corynebacterium glutamicum # 22 146 1 117 206 139 53.0 7e-33 MHKPNPISLAAKASGEPEFREVGVGPWTQEHPGEPRPDDPKSPNYDRRYDTTLLDEGDRR NVLDRYRYWTVNAIRDDLDAAGRHGFEVAIENWTHDFNIGSMVRTANAFTANRVHIVGPH KWNRKGSLMTELYQHVEYHPSIDELVTCWKLRIAGEIAAAQAQAAAAAMHAHQAHSDASA LLSDDDKSNGSPRFASATDHSGYDAVARADARIRTLESSRIIALDIIPGAVPMETYRFPE RCLMLFGAEGPGLSNKALELADDVVYISQFGSVRSINAGAAAAVAMHSWIAQHG >gi|197324944|gb|DS990230.1| GENE 141 159059 - 159343 148 94 aa, chain + ## HITS:1 COG:Cgl2690 KEGG:ns NR:ns ## COG: Cgl2690 COG1131 # Protein_GI_number: 19553940 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 1 92 44 135 310 79 44.0 2e-15 MRAALGLVTPNAGRALVDGVPFVKTPSSMTAVGAVLDAKSAHKGRSAYTHLRGLALTNGI PRSRVDEVIEFTGLASVEKRNTGAFSPGRAVRCC >gi|197324944|gb|DS990230.1| GENE 142 159355 - 159852 170 165 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1678 NR:ns ## KEGG: BBPR_1678 # Name: not_defined # Def: TP-binding protein of ABC transporter system # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 126 8 131 131 207 96.0 1e-52 MSEVALTADDLVIIGRGRILETTTVAAFVAGHSTHSIHVATPEPDKLHAVFETAPQVTVR EVPRNANDPQQGRVFRIEGAALEPTAWAFTHAQAQYETRAIPGQVPAQYGEPAATYTQPN TQEVPRWRSLISRRSLSPCRRSAWRDWCSSATRSRHWLPTSGGFH >gi|197324944|gb|DS990230.1| GENE 143 160025 - 160324 428 99 aa, chain + ## HITS:1 COG:ML1703 KEGG:ns NR:ns ## COG: ML1703 COG0721 # Protein_GI_number: 15827909 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit # Organism: Mycobacterium leprae # 1 99 1 99 99 65 38.0 2e-11 MPTFTREEIEHLGDLARIALTDEEITRLQGELNVIADSINKVQEVAGDDVPPTANPVPLE AYLRPDVAETPLTQEEALAGGPKTEAGMFVAPRILGSEE >gi|197324944|gb|DS990230.1| GENE 144 160327 - 161865 472 512 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163737840|ref|ZP_02145257.1| 30S ribosomal protein S4 [Phaeobacter gallaeciensis BS107] # 11 490 8 455 468 186 30 1e-45 MSDTTELVKLSAAEMAAKVKAGEVSSRELVEAHLAVIDAAEPSIKAFLKVSADQALDQAD AFDAKSADDKAALPELAGVPIAIKDMIVTKGIETTAASKILEGWVPPYDATVIEKLKAAG MPLLGKTNLDEFAQGSSTEHSAYQTTHNPWDTERVPGGSGGGSASAVAAFEAPIALGTDT GGSIRQPGALTGTVGVKPTYGGVSRFGAIAMASSLDQIGPVSRTVLDSALLQEIIGGHDK RDSTSIPEGPRPMAAAAREGLKRDLKGLKVGLIKELGGDGYQPGVEARFNEAVKKLEEMG AEVVEVSCPHFEYSLGAYYIIMPSEVSSNLARYDGMRYGLRVMPPTGVPQTAANMMAYTR ETGFGDEVKRRIILGTYALSAGYYDAWYGSAQKVRTLIIQDFHNAFEKADVLVSPTSPST AFKFGEKMNDPLAMYMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQFIAPQQRDEVMY KPAAALEAALEESWGGPIWQSLKTPWFDGLNK >gi|197324944|gb|DS990230.1| GENE 145 161890 - 163389 2363 499 aa, chain + ## HITS:1 COG:Cgl1230 KEGG:ns NR:ns ## COG: Cgl1230 COG0064 # Protein_GI_number: 19552480 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) # Organism: Corynebacterium glutamicum # 5 497 8 500 501 558 57.0 1e-159 MAEKLMKYADATKKYDVVFGLETHVELSTNTKLFCPAHIEFGGEPNTQLTPVSLGLPGSL PVINKTAVDYAIKLGLALHCEIAEWSQFARKNYFYPDMPRDYQISQYDKPTNGNGYLDVE LEDGTVFRVPIERAHIEDDAGKNTHVGGADGRIEGADHSLVDYNRAGVPLIEIVTKPIEG AGDRAPEIAGAYMRAIRDIVRALNISHARMEQGNMRADVNVSLRPSADAPYGTRSETKNV NSFRGIEKTIQYEIRRQAARLDDGKEILQETRHWDEATQTTAGGRLKSDADDYRYFPDPD LVMLHITKEHIEEMKAQMPEMPRERRNRLKAEWGLSDLQMRDILNADALDLIEETVKAGA KAAGARKWWLGELSREANAKGVSLEELPITPADVAEVEKLIADGKLNDKLAKQTVEGVLK GEGTPDEVVRKHGYKIVEDNGAIEAAVDAAFEANPDVVEKLKSGNMKPMGVIIGAVMKAT RGQADAKAVTKVVMGKIKG >gi|197324944|gb|DS990230.1| GENE 146 163605 - 164648 1060 347 aa, chain + ## HITS:1 COG:VCA0947 KEGG:ns NR:ns ## COG: VCA0947 COG1670 # Protein_GI_number: 15601700 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Acetyltransferases, including N-acetylases of ribosomal proteins # Organism: Vibrio cholerae # 115 229 62 168 173 65 31.0 2e-10 MSENAALPLDQDVSRELPSQITIPPIKGEMVHLRPASVDDLPRMDELDAYYGASKITGKD AQAERAVVHTWVRRSVAWANGQKPDESGVGDPESRRTIAWAVLTDADHDEDGEIDAQSTD NVIGMIFLIDIDGWSRSARIQVVLGRDYRGRGYSRDLMPRVMTYGFAPEPAGLGMHRIWV AVPEQNSRSCSVYQSLGFEPSGASRDALWDAENNKYQDLIVMDTLVDEYDPIRSLDAFGM HVIEDNPGVQEAMSAREHSIAIRKNIAAQAEPAPEPAAVEESADAEQAPRIEKVAAARVP EAHNDDELAAPGEESTWPYGQGERKPSKEAWWRILGRGRKRDMEDDE >gi|197324944|gb|DS990230.1| GENE 147 164645 - 164959 569 104 aa, chain + ## HITS:1 COG:no KEGG:BDP_1986 NR:ns ## KEGG: BDP_1986 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 1 104 1 104 104 166 98.0 4e-40 MSAEDLDNYETDAELALYKEYRDVIKLFTYVVETERRFYLANKVDFNVRSAGQDVYFDVQ LTDAWVWDVYRSSRFVKNVRIVTFKDVNVEEVQKTDIDIPDDMN >gi|197324944|gb|DS990230.1| GENE 148 165100 - 166812 2377 570 aa, chain + ## HITS:1 COG:CC1101 KEGG:ns NR:ns ## COG: CC1101 COG1232 # Protein_GI_number: 16125353 # Func_class: H Coenzyme transport and metabolism # Function: Protoporphyrinogen oxidase # Organism: Caulobacter vibrioides # 36 568 8 482 504 303 36.0 4e-82 MATEGFCKQNNKIGVRFQRFIYTVSDSAIRRPHVTQKQSVVIIGGGPAGLTAAWEFVNNG GSDTYDVTVLEETQEFGGISRTVKHNGNRMDIGGHRFFSKDDRIMDWWKDVLPLQGAPSY DDKKLGREHDMEPGGPDPETTDQVMLKRHRVSRIYWNRRFFDYPISLSVNTFKAMGFKLT MVAGFSYLKSMFHKLPETSLENFYINRFGRKLYSMFFEGYTEKLWGRHPSQISADWGAQR VKGLSILGVLKNAFRKLSPKKRKGEVETSLIEEFWYPKLGPGQLWETVERRCVDAGATVI TDAKVVEIRQAQGRIESVVYESSDGKRTELHADQFISSMPVKDLVNAIDAASHDDDAEAS SAPVPQDMTHIANGLPYRDFVTVGLLVKHMRLKNTTDIPTLGNPPIVPDCWIYVQDPGYK VGRLQIFNNWSPYLVKDVDDTVWIGLEYFCNEGDDFWNMTDAEATKFAISELTRMRVING PQDVLDSHRERVKKAYPAYFDTYAQMSELIEYLDSFGNLYCVGRNGQHRYNNMDHSMATA IEAVANIKSGKTSKQNVWSVNTDKSYHEQK >gi|197324944|gb|DS990230.1| GENE 149 166984 - 169083 2311 699 aa, chain + ## HITS:1 COG:ML1132_2 KEGG:ns NR:ns ## COG: ML1132_2 COG1158 # Protein_GI_number: 15827563 # Func_class: K Transcription # Function: Transcription termination factor # Organism: Mycobacterium leprae # 317 695 59 435 441 486 69.0 1e-137 MQYGLLRKGKRVATSQNLEGMKLIELKELAKQMGLRGTSTMRKPELVATLQAARSGGEAP AGVTVRPVKGAASKPTQQTQPAAQAAQTPEQALKAEPKGSAPVSAADDAVAGLVASLPEP DAASTRTPRISRQKAAESDSKDDRAAAPRRRTRDDAKAGQVAADLFDELDIAPADDQPRH RDDAADSGMMRRRRRAIEPRERDQQNDTVRDLDDILATLPVQNANADAVRGTRDDRDNRD DDEREFTRRNRSDRADRSDRNDRTDRGDRGGDRNDRGDRGNDRRQRRMRGRDRGGRDYDD RDTREVRISDHQDNGGDDLVPVAGIVDALDSYAFVRTSGYLPGPNDVYISMGQVKKYGLR KGDAVTGSIRAPREGDRRNQRQKFVPLQSVDTINGMSVEEAANRPQFAKLTPLYPQERLK QETTPNKLTGRIMDIVSPIGKGQRGLIVSPPKAGKTITLQNIANAITTNNPEVHLMVVLV DERPEEVTDMERTVAGEVISSTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSMTR LARAYNIAAPASGRILSGGVDAQALYPPKKFFGAARNIENGGSLTIISSALVETGSKMDE VIFEEFKGTGNMELRLSRELADKRLFPAIDVNASGTRREELITSPQELPIIYRLRRLLGG MEPEQAYQTLVPRLKKTATNRDFLAAIIQQSNSNPVNGN >gi|197324944|gb|DS990230.1| GENE 150 169181 - 170410 1339 409 aa, chain - ## HITS:1 COG:PH1371 KEGG:ns NR:ns ## COG: PH1371 COG0436 # Protein_GI_number: 14591174 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Pyrococcus horikoshii # 5 391 2 388 389 282 40.0 7e-76 MSMPALSQHSLSVPRSGIRDVFDRVEHVPDAISLCVGEPSATAAPHIVEAACRSIREGHT TYTNVLGIEPFREAVAAYSEKVKGLRYDVDTEIQAVDGATIGLFLAMKALLDAGDEVILP SPYFTSYDAEALMCGGVPVPVALKPEHQMRLNADDIEAAITPRTKAVLLNSPGNPSGAVT PLSELERIADVCIRHDIWVISDEVYHPFVFDGSASIAPSIAAIDGMHERTVVVESLSKTF AMTGWRIGYLLGPEPLIEQTSKLAELMHSSVNSTAQYAAVAALTGPQEHVTAMREEYCAK RQIVLDELDGCTALRLIEPQGAFYAFVDVRACGMDCDRFSRMLLDEEHVAVVPGTAFGSE GAGFVRLSYAGDGRELREGVRRMRVFAERHVNPALGRHTPGYHHLQIMA >gi|197324944|gb|DS990230.1| GENE 151 170619 - 171122 606 167 aa, chain + ## HITS:1 COG:MT3390 KEGG:ns NR:ns ## COG: MT3390 COG1522 # Protein_GI_number: 15842882 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Mycobacterium tuberculosis CDC1551 # 29 167 5 143 150 126 51.0 2e-29 MAQANTRNDEEPDAASRKVEIRPEGSAMLDATDESILDALEEDGRATLAQLSRLSGLSVS AVQSRVQKLEKRGIIKGYRAVLDFELRGLPISAFVSVTPLDYSQEADIPGKLHELEGVVS CYSIAGAPSFMLVVRVSSPSKLEELLNRIHRTVPVSTESTVILQTYF >gi|197324944|gb|DS990230.1| GENE 152 171235 - 171663 592 142 aa, chain + ## HITS:1 COG:AGc4890A KEGG:ns NR:ns ## COG: AGc4890A COG1605 # Protein_GI_number: 15889952 # Func_class: E Amino acid transport and metabolism # Function: Chorismate mutase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 42 133 8 99 105 95 54.0 4e-20 MSEPENSDWAKPSSREVGGGGSETVIDADTARHDPQTAVTVAKIKALRQSIDNVDTAIVS LLAERFKYTSQVGVLKARAGFAPADYKREDYQIERLHRIAIDAGLDPDIAEMYREFVVAE AKKRHQRIADAGGDPGVLDVFA >gi|197324944|gb|DS990230.1| GENE 153 171767 - 173971 2457 734 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1666 NR:ns ## KEGG: BBPR_1666 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 7 734 1 726 726 1082 97.0 0 MAHMTGVMTRSLAAAATLALTLAPSAGGPVTAGANPAEGDAGYSKTQNVMSLANSDGVPG RLYVTNQFTVSRGGDIVDYVAGNSGDGSMLAAEYKAVETGKTTQERVKAGQRVLPWSVSI AYGLNGPQVKPSQIAGASGLVDIRITVEPNAAVSNGYAENSIPVVAFTVPSSVSDDITVG DGMTLTTQGSDMLVSGVGEPGKRTVFDCYMNAKNFSMSQLAFVTVQADDTASFVDEVTAV SDRADALVNTLVVTGSASDHKLIEQLTSMRDREQKLGEKAIKEKTAAHKAAFSSYMAHYV GSYTTHLSGSIGSSTQMQALIGTAGELTGDTPMAQAVTDLANAVNAVSAAHEHDGAVHAI DDLIQRIRQRGTSGLADEISQTMAQESTEGATAYKAGQSQLSNAMIPYSMAYTDVYTKHL SELTGGTSAGAARYQQQAIDAANEEFSTSADLQDDNQKVQSAMDALAAASEHTGAANALQ QISIQFAGALTSTASTGDAQGGDAAADRVRYGWAGSDTTSMAAKAERKRLAAVSRQEREE AERKAQALASGKTDDDSQSGMSIGDVMGNASGLGMLGGAAKSDGKGGNKDSGDGKDGNAS GSGSSSAAGTASGSKSASVPKFSPVYGIAGMNPRSPLQSTSSELIDETVAIGDVSDMLVQ AAQSLAGRGGGGGSAAVAGKPVARLAAALRRLSCDGANAYSDHCIADGRHSYDVLSDWNR HTEDLRLLIIMPAV >gi|197324944|gb|DS990230.1| GENE 154 174089 - 176830 4377 913 aa, chain - ## HITS:1 COG:RC1053 KEGG:ns NR:ns ## COG: RC1053 COG0525 # Protein_GI_number: 15892976 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Valyl-tRNA synthetase # Organism: Rickettsia conorii # 27 844 14 770 812 568 39.0 1e-161 MTEEQDNSIIKAHLTPLPDKVGVDGLEDKWRGEWDEDGVYKFQGTRDRKAVYSIDTPPPT VSGHLHVGHVFSYTHTDVIARFKRMQGYDVFYPMGWDDNGLPTERRVQNYYGVRVDTSLK YDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKLTAQDEKQFEALWRSLGLSIDWSQ TYHTIGEHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTAVAQAELESREYPGFYHKV AFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQSVYSPLFKVKVPILAHPAA EMDKGAGIAMCCTFGDVTDVEWWRDLKLPTRPIIQRNGRIVMDTPDWITDPAGREMFAAT AGKTTFSARKIIVDALREAGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDA KLNTELIERGKELNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVKASGEPD YDHPITPSEDRLPIDPTNDVPEGYDESQRDVPGGFTAEPDIMDTWATSSLTPQIVTRWEE PDEASKALFKATFPMDLRPQGQDIIRTWLFSTVDRAHLENKCLPWAHATLSGWILDPDHK KMSKSKGNVVVPNKPIEQFGADAVRYWAAAARLGLDATYDEGQMKIGRRLAIKLLNASKF ALAIGREDENHHVGETADAVWNPADVTEPLDRAVMAKLALVIRQATDALNAYEHSKALEV IESFFWQFCDDYIELVKNRAYGTADAHGKVPSDAAVKSARTTLGLGLDAFARLLAPYLPF ATEEVWSWMHTGEGSVHRAAWPKADIYAAAATGASPETLAWAGKAVEQLRKIKSEAKVSM KTPILSVTLAAVKDGIDAIKSALDDVAQAGRVIGKFDLAEKHAEEAAAEGEGDDTVVIDA SELGEPPAKKAKK >gi|197324944|gb|DS990230.1| GENE 155 176913 - 178469 1995 518 aa, chain - ## HITS:1 COG:BMEII0284 KEGG:ns NR:ns ## COG: BMEII0284 COG0747 # Protein_GI_number: 17988629 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Brucella melitensis # 44 515 29 500 506 145 24.0 2e-34 MQHSARHTSISSSAKSAIIFVIVAGVLGCAVWLGWSLLHRRYTLPTFSGLQSSVKVSVGI TGAPESLDIRTTDDDSLDRVLLGNVYETLLKRDDNNKIQPSLASSWKVSEDGTTYRFNLR SGATFADGTTITSSDAVWSLQQIITKKYVGSDELSALSNVESDGNSTLVLRLREPDPRLL AKLTTRIGIVYNQRENIDYAKQASGSGPFTVSQWQSGKQLTLSRNDHYWGSKSKAKTVTV NFAADTTELAKALNNGQIDAAIALDQSAADAVKDDGIVKKQGVSNRKVVLAFSNNTQSIL SDKRFRQAVRYLIDKNAMTEALGGGTVMTGPLSPLDDGYQKTDETFGHDIGKGNDLIKYF RFRVSRRPLTFVYPKEYGSQIGEQVKQTMYAEPAYSDVSVSMVDDATWSKTVTQDRQYDF TIYETDGEDDLDLLMDSNSYIGFVSTDSQNAWSKALKSFSSDDYAKNFQSFIGTLDDDSP VDWICTRKPISAYRSNITGVPVNMTYTQLPLADMTTTD >gi|197324944|gb|DS990230.1| GENE 156 178553 - 179215 624 220 aa, chain - ## HITS:1 COG:Rv3674c KEGG:ns NR:ns ## COG: Rv3674c COG0177 # Protein_GI_number: 15610810 # Func_class: L Replication, recombination and repair # Function: Predicted EndoIII-related endonuclease # Organism: Mycobacterium tuberculosis H37Rv # 20 217 5 197 226 232 56.0 3e-61 MPRESKRARIQRMHEEYALLVEAFPHPKCALDFTSPLQLLIATVLSAQTTDKRVNTVTPE LFSRFPDAASLAAANPQDVEDIIHPLGFYRSKTKHLLGLAVVLRDRFGGEVPDTMDSLVT LPGVGRKTANVVLGNAFGVPGFPVDTHVIRVTGRLRWRGDWNSSSPDPVHIEREICSYFE PSQWTDLSHRLILHGRATCHARKPDCAVCPLHDTCPSSLI >gi|197324944|gb|DS990230.1| GENE 157 179228 - 179989 992 253 aa, chain - ## HITS:1 COG:MT0840 KEGG:ns NR:ns ## COG: MT0840 COG0745 # Protein_GI_number: 15840231 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Mycobacterium tuberculosis CDC1551 # 13 227 26 231 268 229 52.0 4e-60 MTDLTLMTFADDPATVLPSLALLSHRVRVLPMDAASLVKMPENTVLFLDARDDLATAKTL CRLIHASGLATPIVLILTEGGFTVVNSQWGIADVVVASASPAEVEGRLRLVSERGNAPIT GASTTDDSERTEDGQIRSGDLVVDTNGYTASLHGRPIDLAYKEFELLKYLVQHPGRVFTR AQLLQEVWGYDYYGGTRTVDVHIRRLRAKLGGEYEHLIGTVRNVGYRFDPPEGEGDKSLA APTASDDTDANAQ >gi|197324944|gb|DS990230.1| GENE 158 180139 - 180894 712 251 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1661 NR:ns ## KEGG: BBPR_1661 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 251 2 252 252 384 100.0 1e-105 MTMGDGEQRTGSSIGRVLAVQAVAYVVLFGVTGVLEFTFGNQGGVAQGVAIALAVVLLVL FQVGWPFRAGIADRLIGAVAGVLSILCARTSLASQLFYPAYEGGRLADDGRLVMYQLVRW AACFAILLIAATIIAFGRQMVRAERSHLIRALSHCMTGAVVSVSAAGWCFVPDLIDMGSA SPDNGLLTRFIIVAAAFVVVAVLFAVCSVSWSREADPDPAAPAPWLGIGLLPVMLSGLLV FAASFVMQLIF >gi|197324944|gb|DS990230.1| GENE 159 181372 - 181959 689 195 aa, chain - ## HITS:1 COG:Cj0167c KEGG:ns NR:ns ## COG: Cj0167c COG1971 # Protein_GI_number: 15791554 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Campylobacter jejuni # 11 192 6 186 187 130 42.0 1e-30 MNLYVPAMIEILLISVSVAMDAFAVSIGKGLTVTRVRPVDVIKTALWFGGFQALFPLLGF FAANTFSKYVTAVDHWIIFALLAFIGGNMIREAFGEEEENSRETAQFDWRHMLPLAVACS IDAFAVGVSFAFMQVNIWFSVIVIGVVTGAFSAAGLYIGRVFGARWQKPAQIAGGAVLVL IGLKVLLEHLGFIAW >gi|197324944|gb|DS990230.1| GENE 160 182212 - 182481 236 89 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MPPLAGAVTERLGVVVALKPPVSRWLTAPASGGGSEANHFDAFARRSRASLISFSATVLQ LRTAFGRLMVGSVAVASSHVAAGQLTGLS >gi|197324944|gb|DS990230.1| GENE 161 182488 - 182982 868 164 aa, chain - ## HITS:1 COG:ML0210 KEGG:ns NR:ns ## COG: ML0210 COG0221 # Protein_GI_number: 15827013 # Func_class: C Energy production and conversion # Function: Inorganic pyrophosphatase # Organism: Mycobacterium leprae # 5 159 3 157 162 175 57.0 4e-44 MAETFNVLVEIPRGSKNKYEVDQETGRITLDRELFTAMGYPDDYGYIEGTLGEDGDPLDA LVMVKNSVFPGCVIECRAVGLYHMEDEEGGDDKVLCVPADVRYDDIKDVNDVNEYHLKEI KHFFEQYKALEPNKEVLPGDYWTGADVAEKEIKEARERLANASK >gi|197324944|gb|DS990230.1| GENE 162 183149 - 185455 3023 768 aa, chain - ## HITS:1 COG:Cgl1197 KEGG:ns NR:ns ## COG: Cgl1197 COG0366 # Protein_GI_number: 19552447 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Corynebacterium glutamicum # 91 764 3 654 675 472 40.0 1e-132 MAEEKKGASALSSSSSRSATSHSDDKTEAKSATRRTSSGKQSTSRTTSPRKRTTTKTPRA SRTTKAATAAAVANGEVPAQSIPVADPSQFGRIAVMDVTPNEESGRFPARVELGEPFKVT AQVFIEGRTKVGATAIVRNHRGKEMQRLPMTCTNPGLDRWEVMLTCGEHSDVKPWQPEFA AIKRQLGEWSVTIEGWEDTYKSWLHDAAIKVKVNDDVENALESGAQLLERWAKTADAKLS AAQRKMLVAAAATMKDTSLTPEDRLAAATSEPVAQLHLTNPLRDGVSPSQPQRFLVQRPE SSFAAWYQFFPRSEGAYVDPETGKIVQGTLKTSVSGLERAKAEGFDIVYLPPIFPIGKTN RKGRNNALEAGPDDPGSPFGIGSELGGHDTVDPLLGNMDDFKALVAKAHELGLEIALDFA LQCSPDHPWVKQHPDWFRHKPDGSIAFAENPPKKYQDIYPIDFNADMPGIEKEVERVLEL WINAGVTIFRIDNPHTKPVRFWQDVIAAVTKKHPEILFLAEAFTRPGMMRALSYVGFTQS HCYFPWRNTKEELGKYLETTNGDDGYYQHNTFWPTTPDILTAYVRDNGIAGHAVRAVLAA MGSPSWGIYNGFELIENKQRPGFEEQIDNEKYEVKVRDWSAADKYGIAELLTNLNRVRRE HPKVFSYHNLTVLESSDPNILAFARHTPAELTGTDKPETLIVVVNLDGHEAHQAMVHLEL PDYGIDPKWGAHIHDELTGRDFAWSWDNFVSLAPWADVAHIFTVVHED >gi|197324944|gb|DS990230.1| GENE 163 185688 - 187961 1865 757 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1598 NR:ns ## KEGG: BBIF_1598 # Name: not_defined # Def: LPXTG-motif cell wall anchor domain protein # Organism: B.bifidum # Pathway: not_defined # 1 757 1 757 757 1354 99.0 0 MNMVVFRRCQSALGVAAVMALALVASLVFAAMPAAAVTLSRADAGTFLRYEHGGEQVIGV MAKDSTNNYYCIEADERVEYQLGESVKLRDDDTARRLGWLMDHYRDGTAAEHAAIAVLAH DLLDLKPDTWKSRRVSVMRDNPTLRRKVEQMWEEAGSNAPANATVTRTYAEGTRTGRVTV SVTNAQGKTIAGIRYAATLNGPAVFANGSATVTGISGAEPIVYSWKATGEGEVKASVAYD RKQVDVFAVAGGQDLVRYGGSSQVSGKAVNFSVRKEFVPTLGTAVAAKVVDAGQPVVDTV TSGVDDGDSWASGLELRASGWYFDGLVVGDLSEPVMPGADETAKEFIARLGTMGFRPSAY GEASFTAPGQRVDVRATAEPGGDAAYEAPRGGGFGTWVWAFEVEKLSDTARQYIGKDVVS GFLEYAETNSNRARVSVESTVTEHTGVVGSELSDTITVDGFPDDHGSFDGNVKLGIGADR AMAQVSVWWAGDPNDSAGDEAYRPQGETPPAEDSNHRLIGVWDYPAVNGRIRVGAGAPDA HGDPVHIVAESHGWYVFVWSFDGDDRVMPASSAYDDAWERVRIWDVARPRKPALTTQVEP DIVRVDEPFRDTARIVGDVPEGAYVTFTAYEAVEEGAVPGMNGVLLDEARAEVDHTLFEQ TIVSPQVRSPKAGLVYWRASLRSRDGDVLVSHELGVEGETVTVEAPDDPPAEPKADPEPE KPVLSHTGAGVVAIIVVGSGAAAAAIGALAFRRRSRR >gi|197324944|gb|DS990230.1| GENE 164 187862 - 188077 258 71 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPNRRLGITRFLAFLFYCAFLKCLKPSPGLARHLRQRQRQRRDRRRKARAPMAAAAAPDP TTMMATTPAPV >gi|197324944|gb|DS990230.1| GENE 165 188111 - 188338 190 75 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1656 NR:ns ## KEGG: BBPR_1656 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 75 18 92 92 139 98.0 3e-32 MFDNGDDILSYVDLGNPVVEHHPPLEKRITLTMPAWTVSELDEEAAELAISRNAVVNTWI ADRLRTMRRRENAHA >gi|197324944|gb|DS990230.1| GENE 166 188682 - 189029 458 115 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1596 NR:ns ## KEGG: BBIF_1596 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 115 6 120 120 224 100.0 7e-58 MVCKFLIQDLKVSLCIANLVHMTAVMVSPALKAQKQELSLQDRVTYNMKVLIAIRQTSQK DLAQAMGIAAPTLSQKFSGRTRWNMDDIEKASDFLDVKPEALVAGHGFEPWTSGL >gi|197324944|gb|DS990230.1| GENE 167 189230 - 190264 1350 344 aa, chain + ## HITS:1 COG:BH2280 KEGG:ns NR:ns ## COG: BH2280 COG1897 # Protein_GI_number: 15614843 # Func_class: E Amino acid transport and metabolism # Function: Homoserine trans-succinylase # Organism: Bacillus halodurans # 1 302 1 302 303 328 51.0 9e-90 MPIKIPSGLPARAILDSERIFALEKPEAERQRVRPLKLVILNLMPKKVETETQLLRLISK SPLQVEIDFMKTSTHEPTHVSHDHLVKFYETLDAFRDNYYDGFVVTGAPVEHLPFDQVDY WDEFKSILDWASTHVFSTMYLCWGAMGALNYRYGVRKVDLPEKIFGVFPQYLQDEYCFLT NGFDEIALQPHSRLAGVNEADVAANPDLQVLTWGPQSGPGLIATRDFSEVFALGHWEYGK TTLQEEYERDMAKGMSNVPFPHNYFPHDDPHLEPLFAWRSHANLLWRNWLNWVYQTTPYD LTEVPGLRAERRLGIDRFRHAPAGPRKDDFSPFVHDDYGVIRGE >gi|197324944|gb|DS990230.1| GENE 168 190794 - 191606 1206 270 aa, chain + ## HITS:1 COG:Cgl1179 KEGG:ns NR:ns ## COG: Cgl1179 COG0356 # Protein_GI_number: 19552429 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit a # Organism: Corynebacterium glutamicum # 37 266 38 264 270 132 30.0 5e-31 MVDAVGTGALLAADSGPELPTVNDFLPPEILFQGTPFAINRIILIRIVATVVLLVVLGIT AKRAKLIPGRWQGVVEMGIDFVRDSVVYQVMGELRGKRYVPMISTLFFTIFVFNLCGIIP GMNMAATATVVMPLVFAVWVLIQYWITAAREKGLWGYIRDECFPKGVPWPVYILLAPIQL CELVLIRPASLTIRLFANMISGHLLVASCLAFAQYWVIDATNKLAGIPVGALWFVFGLVL TLFEAFVAFLQAYVFAILSTVYISMSYPEE >gi|197324944|gb|DS990230.1| GENE 169 191718 - 191948 512 76 aa, chain + ## HITS:1 COG:Cgl1180 KEGG:ns NR:ns ## COG: Cgl1180 COG0636 # Protein_GI_number: 19552430 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K # Organism: Corynebacterium glutamicum # 13 74 18 79 80 59 56.0 2e-09 MDIITLAQVTGSLSVIGYGLATLGPGLGLGILFGKAMESTARQPEVSGKIQMIMFIGLAL VEVLGLLGFVAALIVK >gi|197324944|gb|DS990230.1| GENE 170 192002 - 192529 862 175 aa, chain + ## HITS:1 COG:Cgl1181 KEGG:ns NR:ns ## COG: Cgl1181 COG0711 # Protein_GI_number: 19552431 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, subunit b # Organism: Corynebacterium glutamicum # 8 171 19 182 188 101 36.0 5e-22 MTIAASDGLKLFIPQVYDIVWSLIILVIVALFFHKFFMPKFNAIFDERAAKIEGNIAKAE QSKKDADAAKSKYEAQLSTARVEASKIRDDARAEASHIIADARSRAESDAAQITANAQRS IESQQQQALVSLKGEVGTLATALAGKILGAKLESDDVQSSMIDKMIDDLDTNDKK >gi|197324944|gb|DS990230.1| GENE 171 192559 - 193386 964 275 aa, chain + ## HITS:1 COG:Cgl1182 KEGG:ns NR:ns ## COG: Cgl1182 COG0712 # Protein_GI_number: 19552432 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) # Organism: Corynebacterium glutamicum # 28 267 29 266 271 84 30.0 2e-16 MRGEASRISDRVSRDELAPKLRSTGKDAWRIGNELFTITNVLDHTVQLERALTDPSRPVD DKIGVLKELIGAQAHPMTLEIMSDLVGRKWSRAAHIANAVEDFGVDAMMYYADAAGVTLR VSVELAELHSALLNLPVLRSKLNDDSVPAKARIDLLNAVLGKTEFNEVTLRLAEHAACNP RNRRYLETIQWLINKFSRHMGESMITVTTASPLNIDQIKRLTAVYSAKLDHPVHINSVVD PTVLGGMRIQVGDEVTDNTVVAQLQQLHRTVKAKA >gi|197324944|gb|DS990230.1| GENE 172 193460 - 195139 2219 559 aa, chain + ## HITS:1 COG:MT1348 KEGG:ns NR:ns ## COG: MT1348 COG0056 # Protein_GI_number: 15840759 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, alpha subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 521 1 520 549 696 66.0 0 MAELTIDPATIRKALDDFVESYKPSDTPTQEVGYVATAGDGIAHVTGLPGCMANELLTFE DGTLGLAFNLDAREIGVVILGDFAGIEEGQEVRRTGEVLSVPVGDGYLGRTVDPLGNPID GLGEIKGIEGRRILEAQAPDVMHRHPVDEPLSTGLKAIDAMTPIGRGQRQLIIGDRQTGK TAIAIDTIINQKKNWETGDPKKQVRCIYVAIGQKGSTIASVRQSLEEAGAMEYTTIVASP ASDSAGFKYIAPYTGSAIGQHWMYHGKHVLIVFDDLSKQAEAYRSISLLLRRPPGREAYP GDVFYLHSRLLERCAKVSDDLGGGSMTGLPIVETKANDVSAYIPTNVISITDGQIFLQSD LFNANQRPAVDVGISVSRVGGAAQTKALKKVSGTLKISLAQYRSLESFAMFASDLDAASK NQLNRGSHLTELLKQPQFSPYSMEQEVVSVWAGTHGKMDDLPLGDVLPFEHALLDYLEHS TDILKTIRETENFTPDTEAALDEAVEAFRETYVTKAGKPLVVKKSSTRKPVPVEQEKIIA KADKPAHDPTKHPMAGEKK >gi|197324944|gb|DS990230.1| GENE 173 195143 - 196081 1137 312 aa, chain + ## HITS:1 COG:MT1349 KEGG:ns NR:ns ## COG: MT1349 COG0224 # Protein_GI_number: 15840760 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, gamma subunit # Organism: Mycobacterium tuberculosis CDC1551 # 7 307 8 301 305 212 40.0 8e-55 MGSQLALKGRIASTGSLEKIFNAQEMIASSHIAKARDVALNAKPYADAIFDAVQAVVAHT RITHPIVKKEEDNPKVAVLALTADRGMAGAYTSSIIRETEELLTRLDDAGKQPELYVYGR RGVTYYKYRNRAIADTWEGDTDKPGVEIAEAISNALMTAYMKPASQGGVSELYIVYTEFI NMVVQKVRVLRMLPVEVVEAKVESGPGMSRESEGDNAASSKVRPLYRFEPSLDKVMDAIL PKYIQSRIHECLLEAAASETASRQNAMHTATENARNLIDSLTRKMNASRQASITQELTEI IGSADALNTKEE >gi|197324944|gb|DS990230.1| GENE 174 196090 - 197574 1943 494 aa, chain + ## HITS:1 COG:Cgl1185 KEGG:ns NR:ns ## COG: Cgl1185 COG0055 # Protein_GI_number: 19552435 # Func_class: C Energy production and conversion # Function: F0F1-type ATP synthase, beta subunit # Organism: Corynebacterium glutamicum # 6 488 2 480 483 665 70.0 0 MADNQTTAAPETAAEPINGRVTRIQGSVIDVEFPVGHLPDIYNALTVELTNTGAHEEGET AHTITLEVEQHLGDSTVRAVALKPTDGLVRGASVHDTGSSISVPVGDVTLGHVFDVTGHV LNKKADETIKVTERWPIHRKPPAFDQLESKTQMFETGIKVIDLLTPYVQGGKIGLFGGAG VGKTVLIQEMIQRVAQNHGGVSVFAGVGERTREGNDLIGEMGEAGVLEKTALVFGQMDEQ PGTRLRVPLTALTMAEYFRDVQNQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPNL ADEMGSLQERITSTRGHSITSLQAIYVPADDYTDPAPATTFAHLDATTELSRDIASKGIY PAVDPLSSTSRILDPRYVGQAHYDCANRVKAILQRNKELQDIIALIGIDELSEEDKTTVN RARRIEQFLGQNFYVAEKFTGRPGSYVPADETIEAFTRICDGVYDDVPEQAFSGIGGIDD LEKKWHDLQKELGE >gi|197324944|gb|DS990230.1| GENE 175 197574 - 197876 325 100 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1646 NR:ns ## KEGG: BBPR_1646 # Name: not_defined # Def: ATP synthase subunit epsilon # Organism: B.bifidum_PRL2010 # Pathway: Oxidative phosphorylation [PATH:bbp00190]; Metabolic pathways [PATH:bbp01100] # 1 100 2 101 101 183 100.0 2e-45 MAESSKALMQVNIVAADHPVWHGTAKSVTIPASEGEMGILADHEPVLTVIKGGTVSVVDP AGERHAFEVSDGFISFDFNKLTVAVERGRDVVRTEGPGIE >gi|197324944|gb|DS990230.1| GENE 176 198386 - 198898 307 170 aa, chain + ## HITS:1 COG:Cgl1188 KEGG:ns NR:ns ## COG: Cgl1188 COG1637 # Protein_GI_number: 19552438 # Func_class: L Replication, recombination and repair # Function: Predicted nuclease of the RecB family # Organism: Corynebacterium glutamicum # 1 140 50 186 230 151 57.0 7e-37 MAAPCTLKDVTPDSVEDADGPAPEHILRVCADKTSDVLEVSLYHVYSDTTYDLGIDPGLI KDGVEDHLQRYLSEQIDRIGPGSKLIRREYPTAIGPVDIMALNADGEHVAIEIKRHGGID GVEQLTRYCELLNRDPPPRPRPRHLRRPDHHPSGPRPRPGPRFRMPHPRL >gi|197324944|gb|DS990230.1| GENE 177 199109 - 199915 729 268 aa, chain - ## HITS:1 COG:ML1652 KEGG:ns NR:ns ## COG: ML1652 COG2508 # Protein_GI_number: 15827870 # Func_class: T Signal transduction mechanisms; Q Secondary metabolites biosynthesis, transport and catabolism # Function: Regulator of polyketide synthase expression # Organism: Mycobacterium leprae # 27 266 166 409 414 102 32.0 6e-22 MTDFDTEHGSVDFLDLLSSGSAQDDADSRLESVAFACLVNGLADERAAAILGILDFSDDF LCFAIGGKPLHTMAGTRAAIRRTVHDLGGGPCVTGTTNGLCVALIMPRAAATPDVTCTNT LSAFSTKAPVCLGPLRRGVEGACRTVQAVRSAIAAAPALPQVPRPMRADDVLPERALLGD QDAVDELVNTVYASLQTAGPDDPTLETVSTFLRNGGSLETTAKELSVHPNTVRYRLKRAA ETTGWDAADAREAYVLRTAIALGRMHTA >gi|197324944|gb|DS990230.1| GENE 178 199958 - 202078 2042 706 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1584 NR:ns ## KEGG: BBIF_1584 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 1 706 1 706 706 1273 99.0 0 MTTAHITDHSAATPARGGCGGSGGRSRRATGTALARLATVARWTLAVAACLWIALCVAVG PLYWADSSIADFGALNWLFAVVGFLVPFAAVVAMTRWANGIPVFGWSSGKNGLHPRRLIP SGARRAAARLLASAPGSWVSRTGRFLARICVRATDRWWKIALILFIGWLWVPTTLLSAFG ADIRSQAREFSWAWNQWTGLDQPYIGFFSFVPMDIYPTAHYIWPSNPTYLTDQHNIVLTV LYGAVLSVSRYFTDSNDVGFVVLSSAQFLFAAFCCAATANRFFNLPWLPRRAGIDFTHPE RGPMALVMIDFAHPERGYASPGFAARACAGNGRLPEGASGWFSRLAIILFFLCCPLAVFS TISLTKSPLFAFSFVWAFGVWYELFRTWRGKGDKVVRLRRRSLIALILACVVMLASAKYA WYIIVLQLILALLSDHRRWKAYVVALLLPVIVLHGGVVMLTRTGAIISGDPIESHGVQLQ QIARIAKRNPGSIPQSAREEIAPIFNLDQMADAYQPQDADPVKSSGIQSKKVSYRWRSVT QEDMARFNSAWWQIVKADPVTAIDALLAKCFGYFNPMDQPYVSMDYYVNSDYVTDQTTWI KYWCSEWRQSIAEGAKQFGEIPVLGWVAHGNLYVMMTLLIGAAEVVLRRWRTLVIHLPLL LLMGVMITAPANNFERHMLPVAFVFGFVVLTFWRESQRARRNADIR >gi|197324944|gb|DS990230.1| GENE 179 202203 - 203045 687 280 aa, chain + ## HITS:1 COG:SA1289_2 KEGG:ns NR:ns ## COG: SA1289_2 COG0340 # Protein_GI_number: 15927037 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Staphylococcus aureus N315 # 46 275 34 244 246 79 30.0 6e-15 MPRTTEVADNVIAVAETASTNTLARQMLRDGTMAPPADGGAGVAVVATDVQSAGRGRLER TWVSAPGESMTCSYIATLPAGVIADGSVNGWLTVIAGFAALDALRGALAECGVASEDCGL RLKWPNDLFCQGRKLGGILTEMVPLPGRDDSAALVIGIGINLAIPADRLPTEQSTSLQLH VQGLPDARTLRDMIAAHIVRSLSSRLSGFVADPHAAAERLREETSCVCWTLGRRVEARFT DGSVLTGTATALNADASLSVRDDAGENHVVHTADVGVLPL >gi|197324944|gb|DS990230.1| GENE 180 203224 - 203805 738 193 aa, chain - ## HITS:1 COG:AGc1360 KEGG:ns NR:ns ## COG: AGc1360 COG1268 # Protein_GI_number: 15888092 # Func_class: R General function prediction only # Function: Uncharacterized conserved protein # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 24 175 14 165 190 67 38.0 1e-11 MSERTVSTAQRGRMLASTIGKPVLFAVLMWLASAAGEISIPGTPVPITLQTFVMMLAGLM LSWRQAGSAVVLYLAAGAAGLPVFAGGASTAALFGPSAGFLIGFLPAVIVTALLRGKARL DSAPHAALTAVRYFGASLAGNLVVLYLFGITIQSMVMHVPFTTVAIASMGFVIGDVIKAV VASLAATGLAKLF >gi|197324944|gb|DS990230.1| GENE 181 204052 - 205962 2467 636 aa, chain + ## HITS:1 COG:Cgl0680 KEGG:ns NR:ns ## COG: Cgl0680 COG4770 # Protein_GI_number: 19551930 # Func_class: I Lipid transport and metabolism # Function: Acetyl/propionyl-CoA carboxylase, alpha subunit # Organism: Corynebacterium glutamicum # 5 605 8 590 591 439 41.0 1e-122 MGNIVKKILVANRGEIALRVVRTAREMGISTVAVYSEQDRNAQYVQLADESYLLSGDTYA STYLNEDLLIGILHRSGANAVHPGYGFLSEVPSFADKVEKAGAIWVGPHPQALIDLGDKI TARRVAKSAQVPPVPGISEPVRELRTLLDFSHTYGYPVMMKRTDGGGGRGITVVHDDDEM RRFYMNHDAMQGGDLDEYFIEKFIDKARHVETQCGRDRFGDFTVYSTRDCSVQRRNQKLV EEAPAPFLPDEVINQLETYSRSLFNKVDYIGLGTCEFMVTPHRKVYFLEVNPRLQVEHTV SEEVCGLDLVREQIDIADGGHLTPAPAPRGHSFELRITSEDPATNLTPSSGTLERIVWPS GPGLRIDTGVEQGDTVSPKFDSMMGKVVITAQSREAAVARVRRALDELVIEGVPTPVSLF KQIFNDDEFTAEHGHLFDVSTKWLERKYLNHEPQTVRSGQPASLSGEGQDAGAKAPTSES FVIEVDDRRVKLTVPTDIVNNLMGAGRSRGAKRPSQPLRGQGLHAIAEKKEHNDGKSGVI ASPMQAVVTRINVAEGQSVTKGDLLVVLESMKMENYVYAPVNGTVAKIFVAPATGVEAGE TLVAMDVDGAKARDKSGAVDDGGKSASTAKSGKEGK >gi|197324944|gb|DS990230.1| GENE 182 205962 - 207596 2411 544 aa, chain + ## HITS:1 COG:TM0716 KEGG:ns NR:ns ## COG: TM0716 COG4799 # Protein_GI_number: 15643479 # Func_class: I Lipid transport and metabolism # Function: Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) # Organism: Thermotoga maritima # 55 544 28 515 515 499 51.0 1e-141 MTDIMNSPAVKQVMKQPGHVSADGAAQAQGEQPIRAAVVRAAELARDAESNARTRQHAKG KMTARERLGLLLDTGSFEEIGRFRGGDINGGKAGSAVITGFGDVYGRKIAVYAQDFSVRG GTLGRAEGEKICHLMDMALDLKVPIVAIVDSGGARIQEGVAALTQYGHIFRKTCDASGFV PQISLILGPCAGGAVYCPALTDLIVMTKENSDMFVTGPDVVKAATGETISMNDLGGGLVH STKSGVAHYLGEDEADAIDYARTVLAYLPSNSDAQPPMYAYAATRADRETAKRLTDIVPD NDRQPYDVLDVIRCIVDYGEFVQVHELFATSAVVGFACIDGRPIGVVANQPNVRAGILDV DASEKVARFVRLCDSFNLPIITLVDTPGYKPGADQEHAGIIRRGAKVIYAYANAQVPMVT VVLRKAFGGAYIVMGSKAIGADMNFAWPSSQIAVLGATGAVNIIHRKDFVKAKEAGEDVD ALRAKLAAEYERTTVNANLSLEMGEIDAMIDPEQTRQAIAESLRLLADKKRVRRTTKHHG NQPL >gi|197324944|gb|DS990230.1| GENE 183 207700 - 217101 12915 3133 aa, chain + ## HITS:1 COG:Cgl2444_5 KEGG:ns NR:ns ## COG: Cgl2444_5 COG4982 # Protein_GI_number: 19553694 # Func_class: I Lipid transport and metabolism # Function: 3-oxoacyl-[acyl-carrier protein] reductase # Organism: Corynebacterium glutamicum # 1810 2639 50 843 843 676 48.0 0 MSDPNFFLSRLNGEPHALAFGGQSTPWPVALADLTNDPALEATLRGHVAAANTMLAPVAA DLLATTGRAVDLFGFKPNPARLGTAAAATVSVEGIALTQLGALIDAAGLGLDVANTAPVA VLGHSQGVLGAHMVNVIRKAGSIEAAGQQIDEILAIAELIGVAGTRKARELALTAQHAGA TPMLSVRGATKRQVEVLASRVPNPRGPISIAVTNSSNNHVLSGYPEDLAAFEVEAGKEHK RQQTLRDEKVRGGAVFGPVLEYLEVTLPFHSPLMADAVEQAVAWAHACGFKETRTRELAA EVLLNHVDWAARVKAMLESCDPSKLWIVDFGPGNTLGKLIGNLIQGTGVGVVEAATMAER SALSTMEDEPVRTQNWKTFAPKVLHTPAGDKIRTKFTDLTGKPPVLLPGMTPTTVDPEIV AAAANAGYWAEIGGGGQVTADVFDRHVAELENLLEEGRTVEFNAMFMDRYLWNLQFGPSG IVPKKRASGTPIDGVIVSAGIPELDEAKALVASLQADGLPYVGFKPGTVAQIRQVVAIAK AVAPTTILMQVEGGSAGGHHSWESLDDLLTSTYAEVRACSNLVLVAGGGIGTPERAADYI SGQWARAYDLPDMPVDGVLIGTAVMTAKEAHTSPAVKQLLVKTPGITDTSADADPFAPAG EKWVPSGKSVGGVSSGLSHLHADIYEVENASAACGRLLVRVMKHPEELESRRDEIIKALD ATAKPYFGDLASMTYVEWAERFVDLVFPVVDPTYSLRFLRLLQRIEARVCGQESGEFTSL FAGVDDVASDPKAAIAKLEAAYPQVAEIHVTPADAAWFPVLVSEYPKPMPFVPVIDNDLL RWWGQDQLWQSEDARYSADSVRVIPGPISVAGITTVDEPVAHILGRFEAAALERTRELQS GASTDAYSELGGAESAEVFIRTCPNISWVGHLTTNPAYGTQVGDANYEIIDRGASEQGEE YDLDIHLDTYWDNDPDGGVSKHAVRDIVIPLTLRGAETGLLPVVNRERLVGNVYAMLAAT AGIGNTAITGDKLTDMPKITPSDDKAAYPFGTASATYTLSANLGYDHEAATGGALPQDLA PSRIAPDALVGPAWPAIYAALGSVYVKGYPVIEGLLNAVHLDHLIELEETEDELLKRVDE TITLTSWAEDYFESASGRVVTIHVLHTAADGTVLARETERFAIRGRVYSDALPADAPEYG GALEAKHEDGSAAATVQATPRRLLRRVTVTAPDDMTAFARTSGDFNPIHTSTRGARISGL AAPLVHGMWLSATAQHAVQALDDKGAHYEIAGWTYNMYGMVQLDDKVEISIERVGKVEHG GMAFEVTCRIDGQLVSRGTALVRAPKSAFVYPGQGIQKQGMVLDERAKSPAARSVWERAD KLTRSKLGFSILAVVRDNPKELTANGVTYRHPDGLLNLTQFTQVALATVAYAQTARLREA GSDIWPAYFAGHSLGEYNALSAFADIIPLETELELVFHRGSTMHHLIERDAQGRSNYRMG ALRPNQFGVNDAHVKEYVESVAKASGEFLEIVNYNLAGQQYAIAGTIAGLKYLQADASRR AKEYGGKPPFMLVPGIDVPFHSTLLRKGVPEFRDKLDALLPQYIDYRGRLVDRYIPNLVA SPFEMTKEFAAKILEVVPSERIKAALDDPAVWDSYAADDQKLGRLLLTELLSWQFASPVR WIETQALLFNPANRGGLGVEEYVEVGLGNSPTLANLGSKTLRLPDFSGCDVTVYNVGRDE GRVYMTDSDSLVPDDEPEETETAAPAAAPAPAAPAAAAPAAAPAVVAAPSAAQVGSAVAE LGSAVSGPVDDLPFKASDAIGVLMAYSTKIRLDQIGANDTTDTLTNGVSSRRNQLLMDIS SELGVASVDGAAEATLTQLAQLVNKVAPNYKAFGPVLSDAIRDRLRALFGAAGVKPAHIR ERVTNVWQLGEGWVAAVTAALLLDTREGASSRGGDLAKLPTGAAANAAAADQLIDDAVAL VGQTKGVAVSKPSAGGAAGGAVVDSAALDAFAEKVTGANGVLASTARYVLNELGVTAPTA EPGEDENATVVAAVDAELGSDWPKQVEPRFDSRKAILFDDRWASAREDLARLFYNGDQSV ESLSFVGAGKDVADQAKWFASKSHGRLADTFDRIATEALESVADVPDASRFANDIAVVTG VAPNSIAAQVVNGLLAGGATVIATSHSFRPSVKAWAKQTYHEHAVGGAKLWLVPANLSSY RDVDELVQWIGNVQKKTSGATTTILKPAYEPTLFFPFAAPPVHGTLTDSGELFESQARLM LWGVERAIAGLSAIGADTDVQHKLHVVLPGSPNRGIFGGDGAYGEVKSAFDAIVNRAHAE KVWSSRVTFAHPKIGWVRGTGLMGGNDPLVEVVERHGIHTYSTEQIAVKLLDLCTAESRA EAVEHPLDVDLTGGLGNAPIDIKALRAEAMADAEKAAASAQQSDDDSTSAKTAASGLSIK ALPSPHVPQQAPVDLADWQNVTAKPEDEIVIVSIGELGPWGSGRTRFEAELGIHSDGSVD LSAGAVLELAWNMGLVEWQDSPKPGWYDTDGNLVPEEDIAERYHDEVVARSGIRPFDEGM GNDYKDGADEEETEVFLDHDVTFSVPTEDIAKEYVKMDEAHTSIAADPESGEWNVTRHAG SMIRVPRRATMTRTVGGQFPKGFDPLKWGIPASMVGDVDKIALWNIVTTVDAYLSAGFTP TEVLQAIHPSMVASTQGTGFGGMMSMRKLYLDRFLNHEIPTDILQEALPNVVAAHVMQSY VGGYGNMIQPVSACATAAVSLEEGADKIALGKADFVVTGAIDDIGVESVIGFGNMNATAN SEEMYAKGIDARFFSRANDRRRGGFLESQGGGTILLTRGDIALRMGLPVAGVVGFIHSYA DGAHTSIPAPGLGALAAGLGGRDSKLVHDLAALGVTPDDIAVVSKHDTSTNANDPNESEL HNTLAHAIGRTNGNPLFVISQKTLTGHAKGGACIFQVNGLTQLFKSGVIPANASLDCVDP KLERDDHMVWLTKPLHVGRVKAGLVTSLGFGHVSGFAAIVNPGAFEAAVAHTAGEDALNA WRERANARLAAGQRHLEEGMMGRAALYEPIDNRRFREDGTKLADGNRYNGHEVEKAMLLN PDARLGQSGFFEA >gi|197324944|gb|DS990230.1| GENE 184 217477 - 218040 202 187 aa, chain + ## HITS:1 COG:Cgl2440 KEGG:ns NR:ns ## COG: Cgl2440 COG0736 # Protein_GI_number: 19553690 # Func_class: I Lipid transport and metabolism # Function: Phosphopantetheinyl transferase (holo-ACP synthase) # Organism: Corynebacterium glutamicum # 3 115 1 110 135 77 38.0 1e-14 MSVLGLGHDVVDVSAFAEQLAEPGSRMRGLFSVREVRQAGERARRKNDDESTHLAAKWAG KEAVLKAWCDALGDMPNPYTIENFPWNGIEIVDDSRGRPCVALRPDVERKLRASLPPAAS RNSDEMSGAPGLVRMGPAVMRMPIVTPVSTGSEPAAASSASVSLVFRWHVSLSHDGGIAS AVAMLTV >gi|197324944|gb|DS990230.1| GENE 185 218129 - 218314 66 61 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYAGGYSLGRPQASAGECTPSMSGQNPASGSSAVYGPLVRGSGKTPGRRTSGSYRMRPTL V >gi|197324944|gb|DS990230.1| GENE 186 218364 - 219242 669 292 aa, chain + ## HITS:1 COG:Cgl0689 KEGG:ns NR:ns ## COG: Cgl0689 COG0340 # Protein_GI_number: 19551939 # Func_class: H Coenzyme transport and metabolism # Function: Biotin-(acetyl-CoA carboxylase) ligase # Organism: Corynebacterium glutamicum # 55 288 55 263 269 86 31.0 6e-17 MIALHKVAAPRLDRTAKAADEVAAYERIDSTHAKARRLIERGRFARNDDGGIAITVVAAG AMDDARGRLGRPWACVPGHSFAISFIVTIPESVATDDAVNGWMSMIAGLATLDAIEGTLD ECGAVPFDPECGFHLKWPNDIYCHGLKLGSTFTQVASPPDRHGDVAVIFSVGVNLSVPAD RLPTPESTSLRMHVAPLPPTAELIDMIAARLVASLRTRLEAFVQMPLIQSSRLRSEMHHV CWMMGRQIDAQLIDGRTIAGKVVSLNDDASISVRTASGETERLSTGDIGLMV >gi|197324944|gb|DS990230.1| GENE 187 219718 - 223122 5709 1134 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1635 NR:ns ## KEGG: BBPR_1635 # Name: not_defined # Def: NagC/XylR-type transciptional regulator (EC:3.2.1.35) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 1134 1 1139 1139 1972 98.0 0 MRANGNSTHEILGKIVTAIASIAMTAAFAVPAMAASDSGTAADSGTTQQSGQYKIYPQPQ NTEYGDGSLILRDKANTVVEPGIDSATKARLNEALKLKGIETTAADAVPETAYQLNVLVG INGSNGVVDKYAKQLIADGTLKVDDSTFSKNDSYVLAVRQGNAKTPDTILVLGRDTDSAF YGLTTLYQIFQQLPGRAVSNLTFSDWADVKSRGFIEGYYGSPWSTKDRVNLMTWGGYYKM NTYVYAPKDDPLHRNNWRGLYTKDQIENEIKPQADAGNKSKVRFVYALAPFHNDGEARGK HFRFDTEEHYQEDLKELKAKYMQTIDAGVRQIALLADDSTDWGAQYGNDNTYVRVLKDLT DWIHELQQEKNDDGTAKYEGLKDTILYCPALYSYTGAGDAWYKDIPSNVQIVMTGGRTFG VASKDFADTFTKNTGRAPFMWINWPCSDMNRNTAYQYLVMGGQNNFLKPGATYGTYDGIM LNPMQQSEPSKQGIFMAADYSWNLWQSEKDGQQSWEDSFSYIDHNSPIASKGSRGLRDLA MNMRILNDGGIDGAHKDAEYDAVNKWWINNESVDYTGKLDVKGVLTELKGKLDGGTATAA DFSQALTVYTTLQRAAKNYRANPGDKNMFDQIEPWISYWDDLTASAIDYITAAKQALAGD TETAKATYATAKAAFAKSDTHTIADYYQRNKPARGGLVIVRPTVQALDSFVKAKTGGSVT PTPSDATVSTNGVGAAAWHENVDPKVVIDGDDSTFFWMQSAGCDCVKANAALTVTYAEAR KAKEFRFIQAEKGGDTIVNGKIEYQDADGNWTKIGDVNGDQKQIFTLDSAATVKAVRITN LAQTSKWWKVYDLSATKIDEPGTVTKDALNAKVAEAEKVDSADWTKSSREALADAIAAAK AVAADQDATQAKVDAAVAALESAMKGVERYTAKTADQLKAEHVSNDDATYTEASYNKYQS AYDDFAAALANADDLAKADGEALEAAYTAAKSALRYDQSARDYAQLALNDAEPYVGKASE YTKDSYAKFTVAYEALSKQLKADPNGEGDPATYTALRAALDKAIKGLVKSDGTEPERPGE KPGENKPGEKPGANKPGADGKLSNTGADVFGLIAAMTMLAAAGVTMAGLRKRIG >gi|197324944|gb|DS990230.1| GENE 188 223336 - 224031 928 231 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1575 NR:ns ## KEGG: BBIF_1575 # Name: not_defined # Def: conserved hypothetical membrane spanning protein # Organism: B.bifidum # Pathway: not_defined # 7 231 1 225 225 371 99.0 1e-101 MASEANMADETNNNEATELVGDHVETVDVSKHPDPSIPVTDLSLADIERRQSHPVPWAVF IVAVLAAIIAPYWLGRSLAAGHTQWLITHLNLFTPRGVAFVSWTVTLTTFTGLGLAVVES RNWLWRIVFVVGLAAEQFIAGLSLLKLNFWYSTYVVYGDSARLPNAANLGIIAAGVGVAV YAVVWVGLLILIKKDSPLNVLTRSWASFILFFAIETAALLIVLFGGLLTAV >gi|197324944|gb|DS990230.1| GENE 189 224068 - 224433 448 121 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283645|ref|ZP_03646967.1| 30S ribosomal protein S15 [Bifidobacterium bifidum NCIMB 41171] # 33 121 1 89 89 177 98 9e-43 MPILSHWRVSPADRERTGIKPGAPRSNHKEDAVALTAEEKQEIITKYATHEGDTGSPEVQ VALLSKRIADLTEHLKEHKHDHHSRRGLLLMVGDRRRMLDYLKRVDINRYRSLIERLGLR R >gi|197324944|gb|DS990230.1| GENE 190 224694 - 227357 1459 887 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|62291006|ref|YP_222799.1| polynucleotide phosphorylase/polyadenylase [Brucella abortus bv. 1 str. 9-941] # 18 729 11 691 714 566 46 1e-160 MEGPEIKAVEAVIDNGSFGKRTLRFETGRLAQQADGAVAAYLDDDSMILSTTTAGSSPKE NYDFFPLTVDVEEKMYAAGKIPGSFFRREGRPSSEAILACRIIDRPLRPLFPHTLRNEVQ VVETVLSIDPDDAYDVIALNAASASTMISGLPFEGPVSGVRLALIDGQWVAFPRWSERER AVFEIVVAGRVIENGDVAIAMIEAGAGKNAWHLIYDEGQIKPDEEVVAQGLEAAKPFIKV ICEAQNELKEKAAKETKDFQLFPEYTDELYARIDEIAHEDLNEALSIAEKLPRQDRIHEI KEHVREVLANEFTDMDDAEKEKELGNAFKELQRQIVRRRILTEDYRIDGRGLRDIRTLSA EVDIVPRVHGSALFQRGETQILGVTTLNMLKMEQQIDALSGPQSKRYMHNYEMPPYSTGE TGRVGSPKRREIGHGALAEKAIVPVLPNREEFPYAIRQVSEAIGSNGSTSMGSVCASTLS LLAAGVPLKAPVAGIAMGLVSGDVDGQHVFKTLTDILGAEDAFGDMDFKVAGTSEFITAL QLDTKLDGIPADILAGALQQAHEARTTILDLINECIDGPAEMSEYAPRIITTTVPVDKIG EIIGPKGKMINQIQEDTGAEIAIEDDGTVFISSEGGEAAEKAKAIIDQIANPHVPEAGET YNGKVVKTTSFGAFVNLTPGTDGLLHISQIRNLANGERIDAVEDVLKEGDTVEVVVQGVD DRGKISLAIPGFEDQENNAGRGRRDDRGDRGDRRGGPRRRSDRDDRRDDRDYDDRPRRSS RRDDRDDDFDDRPRRRRSDRDYDDRDDRGYDRDDRPRRRSDRDDRDYDRDDRRGGRSDDR RGGRRGGYDRNPRYATDENYDEYRADRVERSERPRRRVRRDFDPFEN >gi|197324944|gb|DS990230.1| GENE 191 227515 - 227706 97 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140800|ref|ZP_07802993.1| ## NR: gi|313140800|ref|ZP_07802993.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 63 4 66 66 107 98.0 2e-22 MPQATSGNGAISLTVANAPPGRIIPKLRVEIVDIYDSPCEIAVLGPESGDLTRGIANNDN FNP >gi|197324944|gb|DS990230.1| GENE 192 227618 - 228382 357 254 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1630 NR:ns ## KEGG: BBPR_1630 # Name: not_defined # Def: LacI family transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 13 254 1 242 242 469 99.0 1e-131 MSSTCTTEDLADMRRLGKGNLVDAFIMLDIRHHDGRLKSAMKLGLPIVPYGDPGEPYHYH CVDSDTKAIVGMAFWEMHAIGAKKAVIVEDPRGDHEFPFINIFDRESVICAERHGIQLER FEAKDTRWQSFEPLTGKFPEWKGNGVCIYTRSPRTLAWIEQMMLLTGVTPGKDIGLIGEG GRSRHRADRRQGIRARRRTHAAEIHPPRDHDSRIRGLRPYKGHAAFAAGHIRKRCHLTYR GECPARPDHPQITG >gi|197324944|gb|DS990230.1| GENE 193 228382 - 228609 131 75 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1629 NR:ns ## KEGG: BBPR_1629 # Name: not_defined # Def: LacI family transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 75 16 90 90 113 100.0 2e-24 MSGNRPISQKTRDKVEKAMRELGYVPDAHARAMISNRSHIIGLLTETTETTQGAELFPSC GPSAPPRRNTATTSS >gi|197324944|gb|DS990230.1| GENE 194 228764 - 229336 971 190 aa, chain + ## HITS:1 COG:lin0961 KEGG:ns NR:ns ## COG: lin0961 COG1704 # Protein_GI_number: 16800030 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Listeria innocua # 1 190 2 185 185 169 50.0 4e-42 MGWIILAIVIVVIIALVLWAVGAYNALVALRNRVKNGWAQIDVQLKQRADLIPNLVETVK GYAGHESSVLTQVTQARAGAAAAAANPNATTVERATAENALSRALFNLQATMEAYPQLQA NQNFMDLQAQLKDLETKIAYARQFYNDVVLKYNTKIETVPSNIIAGMFHFEQEQYFQADE GSRQVPQVRF >gi|197324944|gb|DS990230.1| GENE 195 229400 - 231658 2804 752 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1627 NR:ns ## KEGG: BBPR_1627 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 717 1 717 752 1337 99.0 0 MNLKRLLRSLATALAGTLVVFAIVIGAGLMLSGSSPDLSYRTLDYDVAVQADGSLKVTQH IDMKLRTRDGDTPWRQLYQKYTLREDGLTNITDISVRNVTAGENYEQGALASPADHSDTS WDREYAGHWYIADVTDGAENPQPFDPAKDGYEISDNTTSRRSKDVEIGWNIPATKKASSL KFDVTMTLHGGTTLYKDVASWQWEPFGDSNLIPIGKVTGIVRFPDGIDASSSWAWLHYAG VSETSRMDDGSLRFSASDVRAGQYLDVVAAYDASAVKPPSGWRQGDAAWVRQQTGRTYLP KLKQSEGQQEIAWRQQQAGPARVRVALWIAVVLAGLVLFAIGMVAAVRSYRESQYHGDIE YWREPPDMSPASAAKMADVMGLSKGSVDSLQMTATMLSLASKKAIAIYPGPSSLYRGVDM SNADNVRLAGMIGADEGKAKSLGKTMTIVLLPAGFDKDAKRELNLSQSERAALSLMQKVS KRVGSPVFDLDGMKRHCEDWKNGYKALNLFTEACSSEFAMLGATRDGGTLASWMGGLGAA LALVSGIIAVFGGNIALALIISAPIMMLSIVVCAYAASSVLTSSGQRYAGQVQGLYRYLQ DFSNFSDRGVADMVLWDRYLVYAAAFGISDRVMAEFAKAYPQVTDPQWLDAHGAGSLLYW SYRPYGYGYMGGPTAGAGAGGVGGGFDPASFSANFGDFGARLNAGFSEIGSVIHAATSGG GGFGGISGGSFSGGGGFGGSSGGIGGGSFGGR >gi|197324944|gb|DS990230.1| GENE 196 231739 - 232290 626 183 aa, chain - ## HITS:1 COG:APE1226 KEGG:ns NR:ns ## COG: APE1226 COG0626 # Protein_GI_number: 14601268 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Aeropyrum pernix # 37 182 236 381 384 102 40.0 6e-22 MAALAATFTTVLNRGDHAIFSDTAGALLSVDNTFNSPFNAWLINRGSVTMPLRMRQHNAS AQAIAEHLQSLPQVRFVAYPGLESHPHHAFAASQLARPDAGFGGVLAFGLNTDHDGHNRF VSKLNVITSAVSLGHDESLIVFLGEDDERQYLYPPGFHQGFFRLAVGLEDTDDLIRDIDH ALS >gi|197324944|gb|DS990230.1| GENE 197 232567 - 233559 1638 330 aa, chain - ## HITS:1 COG:ML1731 KEGG:ns NR:ns ## COG: ML1731 COG0208 # Protein_GI_number: 15827930 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, beta subunit # Organism: Mycobacterium leprae # 11 330 6 325 325 528 82.0 1e-150 MAPISVPRKPLKLIDRVSAINWNRLEDEKDLEVWDRLTGNFWLPEKVPVSNDIPSWQKMS DDEHTLTMHVFTGLTLLDTIQGTVGAVSLIPDALTPHEEAVYTNIAFMESVHAKSYSSIF STLCSTKEIDAAFDWSERNEFLQKKAEIVLDYYEGDSPLKRKVASTLLESFLFYSGFYLP MYFSAHAKLTNTADVIRLIIRDEAVHGYYIGYKYQRGLERVSDAKREEMREYTYNLLNEL YDNEVEYTESLYERVGLTDDVEKFLRYNGNKALMNLGYPALFPAEACDVNPAILAALSPN ADENHDFFSGSGSSYVMGKAEETDDEDWDF >gi|197324944|gb|DS990230.1| GENE 198 233846 - 236041 3229 731 aa, chain - ## HITS:1 COG:AGc106 KEGG:ns NR:ns ## COG: AGc106 COG0209 # Protein_GI_number: 15887423 # Func_class: F Nucleotide transport and metabolism # Function: Ribonucleotide reductase, alpha subunit # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 731 1 728 728 1012 69.0 0 MTDFTDTELPLDNTTDTTVEQYDPAHDYHALNAMLNLYDADGRIQFGKDKAAEREYVTGH VATNTKRFESTGERLRYLIDHQYYAPAVFERYSPEFLDGFYAHAESSGFEFGTFLGAFKF YTSYALKTFDGKLYLEDFPQRCAAVALELAAGNEQRAVEYLDEMLSGAFQPATPTFLNLG KAQRGEAVSCFLVRIEDSMESISRGINAALQLSKRGGGVALLLSNLRELGAPIKHIENQS SGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILRFLDTKRENADEKIRIKSLAL GVVIPDVTFELAKKKAKMALFSPYDAERVYGKPFADISVTEHYDEMVADDRIRKTYIDAR EFFTTLAEIQFESGYPYIVFEDTVNRANPIAGRITMSNLCSEILQVQEASSYNEDLTYSH VGRDVSCNLGSLNIAKAMDAGLAGTVETAIRALTSVSEHTRIDAVPSIRRANDEGHAIGL GQMNLHGFLAREGIQYGSEEALDFTDMYFMTVAYHAYRASHTLAVEHGTAFRGFADSAYA KPAGEGNYFDKYTDGRRSLAPRTELVRALFERFGVAIPTEADWAELRDDILRDGIYNQNL QAVPPTGSISYINHSTSSIHPIASKIEIRKEGKLGRVYYPAAYMTNENLEYYKDAYEIGW KAIVDTYAEATQHVDQGLSLTLFFPDTATTRDLNKAQIYAWRKGIKTLYYIRIRQQALEG TEVQGCVSCTL >gi|197324944|gb|DS990230.1| GENE 199 236092 - 236655 746 187 aa, chain - ## HITS:1 COG:YPO2650 KEGG:ns NR:ns ## COG: YPO2650 COG1780 # Protein_GI_number: 16122859 # Func_class: F Nucleotide transport and metabolism # Function: Protein involved in ribonucleotide reduction # Organism: Yersinia pestis # 51 183 4 131 134 154 57.0 6e-38 MNGRAPGMPQPHPRSTPIDLTAAHAIPAADSTTPSTPEQPAGNTVEHIGAVVYFSSASEN TARFIESCQLSGIGIAVYRIPLKPGSAPLNVREPYVLMVPTYGGGDAKKAVPPQVKRFLN NPANRAWIRGVVASGNTNFGTAYCAAGDIIAAKCRVPFLYRFELMGTREDTRKVRDGLVR FFRDHRG >gi|197324944|gb|DS990230.1| GENE 200 236652 - 236909 482 85 aa, chain - ## HITS:1 COG:ECs3536 KEGG:ns NR:ns ## COG: ECs3536 COG0695 # Protein_GI_number: 15832790 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Glutaredoxin and related proteins # Organism: Escherichia coli O157:H7 # 1 72 1 72 81 76 45.0 9e-15 MTVTVFTKPYCPQCDATKRQLTKQGVIFETVNLEQNPETLAQLQQAGFQQAPVVITPDAS WTGYRPDLIRELAKKLAKKTAPAAA >gi|197324944|gb|DS990230.1| GENE 201 237361 - 238221 1377 286 aa, chain + ## HITS:1 COG:all2316 KEGG:ns NR:ns ## COG: all2316 COG0667 # Protein_GI_number: 17229808 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Nostoc sp. PCC 7120 # 13 286 14 284 284 165 35.0 7e-41 MVLHRNLGPFGTTAIGLGEMPLTIENNLGHDKGIETIHAALDAGCRHLDTAWAYYCSGGE EQTGEKLIREAMASWNGPKDEVTIATKVGHFRNFTDGRPTWDVDGRPENLIKRGKESALA LGVDTIDLLYFHRPDPKVPYNESVEAIKQLVDEGVAQEAGISNASIEQIDIARGILGDKL IAVQNQYSPIYLDTADTLEYTAKVGLNFVCWSPLGGFRKPKDETKFDPFREIAAARGVSY QQVVLAWELAKGDHVFVIPGAHRPETILDSLHAGDLELTPDELVRL >gi|197324944|gb|DS990230.1| GENE 202 238442 - 238957 491 171 aa, chain - ## HITS:1 COG:MT3281 KEGG:ns NR:ns ## COG: MT3281 COG2826 # Protein_GI_number: 15842771 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives, IS30 family # Organism: Mycobacterium tuberculosis CDC1551 # 8 170 175 336 344 172 55.0 4e-43 MEPGADSQPAEAEDRAVPGHWEGDLITGSRNKSAIGTLVERTTRFTILLHLPDGHDAEHV QRAIIDKMASLPKLLRNSLTWDQGAELALHKRIGASLDMAVYFCDPHSPWQRGTNENTNG LPRRYFPKGTDLSVHPEDYLDAVAEELNDRPRKTLGYMKPSEKIIELLDAA >gi|197324944|gb|DS990230.1| GENE 203 239246 - 239512 127 88 aa, chain + ## HITS:1 COG:no KEGG:BLJ_1247 NR:ns ## KEGG: BLJ_1247 # Name: not_defined # Def: integrase catalytic subunit # Organism: B.longum_longum_JDM301 # Pathway: not_defined # 2 83 274 352 360 86 65.0 3e-16 MVERYQSMLAFSFLPVARVRPLRHTLPVRLETPTAWAAWVKFMPSSSGRRTYSSRLAAHI SFLVGYSTPLNVQRRSPPRSSFRWLPVT >gi|197324944|gb|DS990230.1| GENE 204 239673 - 241265 2063 530 aa, chain + ## HITS:1 COG:CAC1687 KEGG:ns NR:ns ## COG: CAC1687 COG0826 # Protein_GI_number: 15894964 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Collagenase and related proteases # Organism: Clostridium acetobutylicum # 5 276 3 274 406 331 52.0 3e-90 MARRKPEVLAPAGNLRGLKAAVDYGADAVYCGGKAFGMRSAPKNLSLEDFEEGARYAHAR GARVYVTCNVLPRNNEVRAIQEYISQLAGTGVDALIVTDIGVLMTAHSVAPELELHVSTQ AGVTNYGAANALYDLGARRVVLAREMDLQAVRDIRANIPDDMDVECFVHGSMCMAFSGRC LISNYLTGRDGNHGECAQPCRWKYSLVEEKRPGQYFPVEETKEGTYLFNSQDMCMMEHLD DLIDSGATSLKIEGRAKSAYYIAAMTNAYKTAVNEYMVQRGFEAADGNTLRPFHDRVIRT DAPAPVWLNDDPYAAELSGADLTDHIMEQADVAFAGVPGDDGVLEVGQSPTAPDRISDLE QQARSTRRKSNTRDESPIDTNGWQHAAVAPAPPVTLPEWLKEEPYKVAHREYSTGFYYPD RKVTENTNRSGYFRSWLVVGEVLSWSPDEGGRVTLMSRNKIEPGQEIEFLLPGDAPLIYT VPENGLRDADGNWVQAINNPAHVFSMPCPHEVPVNAAIRSRTKHPTLKAA >gi|197324944|gb|DS990230.1| GENE 205 241314 - 242324 1194 336 aa, chain + ## HITS:1 COG:Cgl2104 KEGG:ns NR:ns ## COG: Cgl2104 COG1496 # Protein_GI_number: 19553354 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Corynebacterium glutamicum # 38 281 11 226 246 131 37.0 2e-30 MSDTQFDDEILDSNAISPTDEEGNPVPVTIPIALAPGVTVVYTTRLGGVSHGDFGDCNLG GKGGDDPQAILANRVSLAKSVGCGLSLVSQVHSGRAVDVDASWHLNTPFGFDVSGTPCEV TADGEAQAATVVEADGQVTSRAGVALGMFAADCLPVLMADAQAGVIGAAHCGRKGLQRGI IGATIDAMMAKGAAPERIAATLGPCICGDCYEVGDAIADGFDAQFPGTFTLTRFGGPGID IAKAARMELAKAGVPVDSIVDSRPRVNAASQYLYEDEELASLCAADGEGEPALADRWSTV RHSMCTLENPLWYSHRRASLAGKAHEGRLLALIMRG >gi|197324944|gb|DS990230.1| GENE 206 242688 - 243488 269 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764767|ref|ZP_02171821.1| ribosomal protein L15 [Bacillus selenitireducens MLS10] # 12 255 3 233 234 108 31 5e-22 MTQRDDREPEAPVVAVVLAAGFGTRFDPDNPKQLVSVDDKPIVCWSIEAFEQNPHVTDTI VVVNPQVRDEVERLVDEAGYPKVRMIIDGGAERADSTAAALQALGAAGIPPRAKLLIHDA VRPFVEQSSIDGCITALDEFEAATVAFASTDTMLLTEDLGDRKVVRSVPDRANMFRAQTP QAFRFETIRRAYELASRDPDFHPTDDTRVVVDYLPDVPVAIVAGSRTNMKITTRDDLPQA EQISLEIRKRLARERMHQVFAQVREQ >gi|197324944|gb|DS990230.1| GENE 207 243522 - 244199 731 225 aa, chain + ## HITS:1 COG:PH0596 KEGG:ns NR:ns ## COG: PH0596 COG2039 # Protein_GI_number: 14590492 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Pyrococcus horikoshii # 4 182 1 165 206 117 36.0 1e-26 MQQLNVVICGFDHYENIDVNPSYEVPEALVRDGIGEPSDVDDPLHDANVSINTVALPVSF ANAWPTLLETLDATRPDIVIATGLKHAAHSVAMERCATNLMNAARPDADNALPRFEPIIK DGPAAYWTRLPLRAIINDFARDGIPATLSSDAGTFVCNSLFYQLLHWTATQDRVLAGFVS FPPINGGSRLQNGLDLRQQVRAGRDVVRETVRYYLQPSSGDILIA >gi|197324944|gb|DS990230.1| GENE 208 244348 - 245814 1971 488 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1613 NR:ns ## KEGG: BBPR_1613 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 488 1 488 488 485 99.0 1e-135 MADQFPIVIRGYDKEQVDRAFASAQQTLAALRAQIKQDGDRLLQLQAKLQEERNRQSSKN HTFASLGANAQQMLASAEQTSTELLERAKQDAASTRASAKAQAETLINNAKLDAQHLLDD AQAKADTITGNATNQAQTITTSAQQDAAQLRAETAKIVTEQRQSVDLELTNSREEHEKRM ASERAKQEREIAEMQAKATQQIASQRRSANEEIAKLKSESNDQIQAALAEANKKLSDVRE QVSKMMADAQRRAGEIIDAAKAKAQEIRDDAEVRHTQTMSQVNAEVEQIRTDIAAQQDEA TKKVSELLENLEERRVAAKKESDELIGQAKTVREDADTYAASKRKEADDQAAQILEKAGE DAASQIEDRRKAAQVELEDLQGRIAELQSREAAITQRVSELRSMFTKAFSGFGFMNEQGA EQPGAASHQGAPDVPLYNAAAQDEPAPAYESHAVAEHADNQDAEAVAAEPVAEHVAEHTE AGEAETAE >gi|197324944|gb|DS990230.1| GENE 209 246050 - 247405 1788 451 aa, chain + ## HITS:1 COG:TP0112 KEGG:ns NR:ns ## COG: TP0112 COG3579 # Protein_GI_number: 15639106 # Func_class: E Amino acid transport and metabolism # Function: Aminopeptidase C # Organism: Treponema pallidum # 13 451 3 442 450 286 36.0 6e-77 MTENTSSSEITPLSGEQLNDLVASFDASQSNRLAMNAVTAAGIDKVALSYDRSRLLQRRF SVTVDNGEVTHQDRSGRCWLFSSLNVARFVAKKNLGVKEFEFSQNYAMYFDKLERVNYFL QDVAALVRAGEPSDSRLIQHLLADVMGDGGQWTMALNVYKKYGAVPKDLFPETESSKNTG AMNTQLRHLLHTAVAHMYADPASIDDEVAKTVAAGHRILTIHLGEPPKSFDWEWTDSEGM FHRDGEITPVEFWKKYVGTADLEDYVCLVDDPRREHAKGKKIGIEHLGNVAGGNPTEYLN VPNQFMKDCVRAILTEKGIPVWFGADCGPFMDRERGAWATDLFEYGNVYDVDFDMDKESR VRFGDSAMNHAMAFVGVDVADDGTTTRRWRVENSWGDKIADKGYFTMSDDWFTEYVYEVA VPKAMLPAEYQAALAEPATMLPAWDPMGALA >gi|197324944|gb|DS990230.1| GENE 210 247623 - 248654 1058 343 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1555 NR:ns ## KEGG: BBIF_1555 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 343 2 344 344 551 97.0 1e-155 MKKASAGSRTSFNTFNRILTCLIPIAFVLTVGACGTPGSDAGSAERQSSGQSESAESSEP SSSASASGGQLATSALETLPVKGRAPKTGYSRDQFGEAWADVDHNGCDTRNDILNRDLTN KTHKAGTHNCVVTSGRLVDPYTAAVIDFVRGQSTSAAVQIDHVVALSDAWQKGAQQLSAD RRKQLANDPYNLLAVDGPSNQRKSDGDAATWLPANKSFRCSYVARQIGVKAKYSLWVTQA EHDAMSRVLSSCPAQAVPTGDGAESVVPQEDVSQGSSSQDGSSGEQSESSTVVEPAAPSD GDSSDVYYKNCAAVRAAGKAPLYKGQPGYSTKLDRDGDGVACE >gi|197324944|gb|DS990230.1| GENE 211 248865 - 249995 1407 376 aa, chain + ## HITS:1 COG:NMA2180 KEGG:ns NR:ns ## COG: NMA2180 COG0722 # Protein_GI_number: 15795051 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Neisseria meningitidis Z2491 # 25 375 7 348 351 367 54.0 1e-101 MAGLRGPDSSEDERHLGGNAVFPETVDVNIRQLDPIPAPRYFLRELPLTDDMSDLVLQSR QEIRDILHGRDDRLLVIVGPCSIHDPKAAHEYAQRLAALKGELEGRLMIVMRVYFEKPRT TIGWKGLINDPDLDGRFDIRKGMWLARKVLTDVLGLGLPTATEWLDPITPQYICDLISWG AIGARNTESQVHRELASGMSMPIGFKNATDGSIKPAADSCFAAGFEHHFLSINLDGRVIS AETKGNPDCHLILRGSNTGPNYDAASVAAALEALRASKASGPSERGLVIDAAHGNCGKDE NVEAEVIENIASRIADGEPGILGVMMESFLKGGHQKPAPLDQLVYGQSVTDSCVPWERTE ELLHTLADAIDARRAL >gi|197324944|gb|DS990230.1| GENE 212 250140 - 251522 1606 460 aa, chain - ## HITS:1 COG:alr2188 KEGG:ns NR:ns ## COG: alr2188 COG0477 # Protein_GI_number: 17229680 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Nostoc sp. PCC 7120 # 40 420 14 366 435 64 23.0 5e-10 MPESSQAQTAPHRERTSPQRSESLWGNPTYRQWFTADTASTIGAAMRGFAISLIAFSLTQ SVVLAGWLATFSQIATHVSDVFGGTVVDRHNRKGLIIANAVFGTLLWGTVFVLIALHAIA FPIFAIVTVAASAVNGLLANATNAMLRTIIPTREYPKAQSLNQGRDSVVSIAGSPLGGVL YAVAPWLPFAVASLMYAISGVSAAQLRVDEHVRDMVTTDRKSKRPDTASQAGCTSDAVVA PDADATAEPAHTSFFEDFIEGWRWTLRRHTLLAICVIAALVNFGLNGVFAAVNLQLVSTH VDSVRLGFVNTVMGVGMLIGAVIAARVCERVHMGTGLVVLSVTSLLTLLPMLFSSDYLVI LASSLIVGLPIPTINSLLMGFVFAKVPSEMQGRVESASDMLSMIPTLFCSALAGSLLPRI GFGATIGLFLAVLAVNVVIALLMPSIRSLPAADHWDDASL >gi|197324944|gb|DS990230.1| GENE 213 251644 - 252249 387 201 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1608 NR:ns ## KEGG: BBPR_1608 # Name: not_defined # Def: putative transcriptional regulator # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 201 1 201 201 343 99.0 2e-93 MAQASDTAQPQTPPRRDNPATVTDTNRLKALSHPTRLRILTVMSDTEPVTVGQIAEQLGE SAGTVSYHLKQLEKAGFVTQTPSPDGDNRRSCWLAAQRRLEINADAAVDSAMATTMDQVS STLRQEAWQRYRSASDNLPKQWTDPTVTSSSVLRLTSEEYARMSQELRELFNTWTSRDLA HEEGDGSQPVMLNIDAFRWLP >gi|197324944|gb|DS990230.1| GENE 214 252892 - 254130 1582 412 aa, chain + ## HITS:1 COG:RSc0743 KEGG:ns NR:ns ## COG: RSc0743 COG0722 # Protein_GI_number: 17545462 # Func_class: E Amino acid transport and metabolism # Function: 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase # Organism: Ralstonia solanacearum # 49 410 27 390 392 354 51.0 2e-97 MQQQNMGERTPQGTPRHAGPKPLNTPEELRAIRQAMDEGKNPLLATGVPRWEDQVGVSRI INRRVLELEPLPTPAQVLAELPLDSAAQEIVAYSRDEIRACLYGQDDRLLVIVGPCSVHD PNAALDYAHRLSKVMKETEGELLIVMRVYFEKPRTTVGWKGLINDPDIDGSHNIRKGLLL ARKTLIGVLGEGLAAATEFLEPTSPQFISDAVSWGAIGARNTESQVHRQLASGMSMPIGF KNATDGSVKAAVNGCYASAQQHTFFGIDHMGRACAVETLGNPDCHVVLRGSIHGPNYDTA SVRRAMDDVRAMMPAESAATHGLIIDCSHGNSGKDEHRQAEVVRDIARRIADGEEGITGI MMESFIESGNQPAAPLDQLVYGKSITDRCIGWDETERLLHELADAVSARRWR >gi|197324944|gb|DS990230.1| GENE 215 254178 - 254885 1044 235 aa, chain + ## HITS:1 COG:BH3238 KEGG:ns NR:ns ## COG: BH3238 COG0775 # Protein_GI_number: 15615800 # Func_class: F Nucleotide transport and metabolism # Function: Nucleoside phosphorylase # Organism: Bacillus halodurans # 1 208 1 205 233 110 37.0 2e-24 MTTIAIIGALDDEVALIAASLNDVTHDRQAGLDVTRGTLGTNDGGTVTAVATVGGMGLVN AAATTQHLIDAYHPDAVIFSGIAGNLNRNLHINDVVLGGTLRYLDTDMRLVGQWKPGTEQ QPVEEFHSDDRLLSLADQALSAMGVTHIIGIIASGNYFVDTPAQIAKVIHDTGADAVEME GASVAHVAARNEVPALVIRALSDNADTDYEEFKGFDISEYADTAARIVLDILRRM >gi|197324944|gb|DS990230.1| GENE 216 255074 - 256429 1571 451 aa, chain + ## HITS:1 COG:Cgl0398 KEGG:ns NR:ns ## COG: Cgl0398 COG0642 # Protein_GI_number: 19551648 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 156 445 108 380 386 195 41.0 1e-49 MTWVHVALAVLVTIIVLVIAVSRSYALGRESGERDTLAGQGSDSGSLFGTDVPVREAEQG LIDVMPSEVIVCDGNGSVRCSSKSQVNVDVIENGWIVKDEILDILHVVVENGGVREREMC VSLDLTRMSSAISGRGVTAGSSAPSDSYLRVRVGHICDGLYAVFINDVTEQRRFERMRRD FVTNVSHELKTPAGAISLLAETVSDAADDPGAVRYFAGRITKESARLTELVTHLIELQRA QDAPAMLKAQRISAMSVVRAAVGENLVQAGAKHIAIRLSLRGEQALVDADAAAADEAQRD IAIMVDRETLTMAVKNLVENAIRYSPEYTTVSVSVSLCKDPSSMTIRVIDQGIGIPSASL DRVFERFYRVDPARSRATGGSGLGLAITKHCVQECGGTISVWSREGEGSTFTIELPVAPE PDDDDGERADDGEAPGETVGAPGAGDAATQE >gi|197324944|gb|DS990230.1| GENE 217 256582 - 257286 1075 234 aa, chain + ## HITS:1 COG:Cgl0399 KEGG:ns NR:ns ## COG: Cgl0399 COG0745 # Protein_GI_number: 19551649 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Corynebacterium glutamicum # 1 230 1 231 232 275 64.0 5e-74 MTRILIVEDEESYREPLVYQLTREGYDVSAAASGEEGLELFTKGGIDLVLLDLMLPGIDG TALCRRIREQSRVPIIMLTAKSAEIDKVVGLEIGADDYVTKPYSFRELLARIRAVLRRNQ GAVEASGVVDDDIPLVCGDISMQVGQHQVTVRGESVFFPLKEFELLEYLMQNKGRVMTRH QLIDRIWGSDYVGDTKTLDVHVKRVRSKIEEDPAHPRYLTTVRGLGYKIDSPQQ >gi|197324944|gb|DS990230.1| GENE 218 257533 - 258663 2017 376 aa, chain + ## HITS:1 COG:Cgl2521 KEGG:ns NR:ns ## COG: Cgl2521 COG0226 # Protein_GI_number: 19553771 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, periplasmic component # Organism: Corynebacterium glutamicum # 44 374 55 375 375 165 35.0 1e-40 MRKNLFVRSIAAVSGIVMLASLAACGDNTSSAGNNSGSTSTEKITGSFSGAGATSQQAAE EAWISAYMAANSGANVTYNPTGSGAGVTTFLSGATAWAGSDKALSDDEVTQSSDKACANG TTAFDVPVYISPIAIIFNLKGVSDAGKHINLDADTAAKIFDGKIVKWNDPAIANQNKDLT LPDTQITVVHRSDKSGTTQNFVSYFKDQAPDSWTHELSENWPDIPGQQSAKGTSGVVTAV KQADGTIGYADFSQVGDLGTAAIKVGENYNEISADAGSKVIEDSEIDTSVKGDNRVVVKI NHATKAKGAYPIVLVSYDIACPAYKDANTAKFVKSWLTYVTSDEGQKTASSAAGSAPLPS NIVEKVTKSIEAIKTK >gi|197324944|gb|DS990230.1| GENE 219 258792 - 259769 1421 325 aa, chain + ## HITS:1 COG:Cgl2520 KEGG:ns NR:ns ## COG: Cgl2520 COG0573 # Protein_GI_number: 19553770 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 3 323 35 354 355 198 39.0 1e-50 MSSQDKAADSPASTGKTGDVVFKTIAYAAGILILVALAAVFLFLLFQAWPLIGGDQAANT ATIESFTGNRAHNFWQYVGPLVFGTVLVSALSLIIAFFISIGIALFISHYAPKKLATALS YVVDLLAAIPSVIYGLWGGLILVPAIQPVWNWFAKYLRWTYIFDGSLNDPSVADSPSRTV ATVAVVLAVMILPIITSVSRDIFMQTPRLQEEAAIGLGATKWEMIKLAVLPFGKSGIVSA SMLGLGRALGETMAVLMILSPGLTYSIKLLRASQNQTIAANIAAQYPEADPNIGVPVLIG TGLVLFVITFLVNFVARKITEKASA >gi|197324944|gb|DS990230.1| GENE 220 259769 - 260812 1564 347 aa, chain + ## HITS:1 COG:Cgl2519 KEGG:ns NR:ns ## COG: Cgl2519 COG0581 # Protein_GI_number: 19553769 # Func_class: P Inorganic ion transport and metabolism # Function: ABC-type phosphate transport system, permease component # Organism: Corynebacterium glutamicum # 25 344 3 306 307 197 40.0 4e-50 MSEATVKSTISVDANAVKKTPAARNDKQLPDIDFDRFKTSRSFAASRKRKDVFMKSLICL AFIIACIPLISMLWTTVANGIKRLNLNFLSYNMSGVVGGSQTPSGGYGGVLHAIIGTLEI TLGAMVISVPVGLMCAVYLIEYAARGNKLAKSIGLLVDVMSGIPSIVAGLFAYSMFSLIG GPGTISGFEGSVALSLLMIPTVVKTSEEMLKVVPGDLREASYALGVSKQRTICKIVLRTA LPGIVSGVILAIARVIGETAPLLMTAGYATFTNVNLFSGEMTTLPVFVYQEYSKLRANCP PNAGSSCVTTIPMERSWAAALVLIIIVLILNLIGRVVARVFAVKSER >gi|197324944|gb|DS990230.1| GENE 221 260852 - 261631 181 259 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 214 1 207 223 74 29 8e-12 MGQRIDVKHLNIYYGDFLAVEDVNINIEPNKVTAFIGPSGCGKSTVLRTLDRMHEIIPGA HVKGEVELEGKNLYAKDVDPVAVRRDVGMVFQRPNPFPTMTIRENVLAGVRLNNRRISKS DADDLVEWALKGANLWEEVKDRLDNPGIGLSGGQQQRLCIARAVAVHPQVLLMDEPCSAL DPISTLAVEDLINELKGDYTIVIVTHNMQQAARIADYTAFFNLKAVGEPGHLEYFADTTT MFNNPQNAEAERYISGRFG >gi|197324944|gb|DS990230.1| GENE 222 261925 - 262827 224 300 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1599 NR:ns ## KEGG: BBPR_1599 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 15 294 1 280 305 559 99.0 1e-158 MNDYEPIPGEPTATMFQSLEQIRRQTLQRCTATVGQSDRQLLFGMTTALELQGVPVPSHC NLDTAALHVTVRTRSGRPHIRPLKSVPVIVHIWSHCTPQSLIHISNGVHALHVFHVWAQL SPYLSTEDLVVLGDSILTMLVRNGAPDADKLYLELQRFIKEMPPFRGKSICRQAMTLVRP NIRSPAESSLRLGVQRHGIPDGRCNVVVPGITFRSGAAISLDIAWVEFKVGVEYDGDHHR TDKVQWRRDNEKRERLRAHGWILIIVTAQNLIDEMSIAELALRIARRLAERGASRSSQSA >gi|197324944|gb|DS990230.1| GENE 223 262838 - 262948 91 36 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVMVSDGLWIYVDNPFSIHISTEIPPSVARGPPTR >gi|197324944|gb|DS990230.1| GENE 224 263053 - 264447 2199 464 aa, chain + ## HITS:1 COG:SPy1736 KEGG:ns NR:ns ## COG: SPy1736 COG2252 # Protein_GI_number: 15675585 # Func_class: R General function prediction only # Function: Permeases # Organism: Streptococcus pyogenes M1 GAS # 1 464 1 486 486 437 58.0 1e-122 MEKFFHLKENGTTVSTEIVAGLTTFFAMSYIIVVNPQILHQTGMPWGGVFLATIIAAIIG TLVMGLFANVPYAQAAGMGLNAFFTYTVCFGLKFTWQETLCMVFLCGLINIIITVTKIRK MIIEAIPPMLQNAIGGGIGIFVAYVGMLNVNLVTFTPKDTKAAGKGLATGATPGLATLNT PTLWLFLIGLLFAIVFTVLKLKGGMLLTIVITAIIGIPMGLTSMSNSVSISDTFAQLPQT FGVIFSADGFPALFSDVSKLPLVLVTIFAFSMSDTFDTLGTFIGTGRRTGIFSDDDMKHM EDGKGFSSKLDRALFADSIATSIGAICGTSNTTTYVESSAGIAAGGRTGLTSVVVSICFA LSIFLSPVISAVPSAATAGVLVIVGCMMASSLKEIEWSDISEAIPAFFAAVFMALAYSIS YGIAAGFITYCIVKTCKKEAKSVHPIIWIVSLLFILNFILLAVL >gi|197324944|gb|DS990230.1| GENE 225 264520 - 264819 299 99 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1597 NR:ns ## KEGG: BBPR_1597 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 26 99 1 74 74 148 100.0 9e-35 MCVCSLGNTMDVRDRTDCPIPPVATMVLTVGGDPSADDDQIVACEIYISGQLLDSQYRRG KDVTVTCSYSSWQQEPFNGREVDLPRLGEYGNDLAKLVS >gi|197324944|gb|DS990230.1| GENE 226 264980 - 270247 7219 1755 aa, chain + ## HITS:1 COG:CAC2367 KEGG:ns NR:ns ## COG: CAC2367 COG5492 # Protein_GI_number: 15895634 # Func_class: N Cell motility # Function: Bacterial surface proteins containing Ig-like domains # Organism: Clostridium acetobutylicum # 843 955 144 255 752 62 35.0 8e-09 MNRRISMWLRGRGSPWRPAAAVIATVSMMLATVMGPHFAGMRAQAVEPVQTTTIPHTKIT GDGNYFTFADNAWDPGNDVHTWSKAPSDSLPAEDIWYTVRFFGSAIDVYAGKNRPMGKVK YYIDGAEKGTYSLYNASNINETKIASFTGLDEGEHVFKAVATGERDTNSTNALIDCAKVV VTHQPYVVTGVTLDTTSMTLGVGDSKRISYTVAPDYATIDDMTYTSGDTSVATVGADGTV TAVAPGATAITVASTAAGISKTVDVTVARMAPNLTGGIVDPDTQYTQKRFDEVKALTTNN RALKAWKNDKVNSEISLAAVGTTVSNLTVTASDLTSQGGDVIAKSNVTATFIKSTRAYNG SYLGYGDPNREVPAATETNRSESNDILYQSGPITVKANQVQNIWVSFAIPKDAKAGTYTT TLTATADGMETPLTFTYTIEVKAATLPDPAEYEKNFDVELWQYPYSSAEYYGVTPFSDEH LQILRSSMELYKSIGGHAITTTINEDAWSGQTYSANAIHYPSMVKWTKSGGGFTYDFTDF DKWVTFNKGLGIGDKIVIYSIAPWHGNFTYWENGTMKSERYTVGSERWRSVWTDFLRKLI EHLMDKGWFDESYIGIDERGFSADAFDLIDSIRNIHDVPLKTAGAMDGFVNKFDLALRVT DLNVGDTAAAAHPTDFTRLIEAREAKGLRTTLYSCTEHEPGNFSLSAPVESYWSVVNAGE QTSGFLRWAYDAWVADPLNDATHNAFEPGDPFLIYPSEKSGDKVSKSSVRLERIAEGVRD VNKIRLMVTEIPSLQADADAMYAKIRTTVTTSHSYLTAAQVTQLANEMSGFKGDLDMLTD KYISLKAQGTSTVESVAIDGGDQEIMLGTAKQLTATLKPANLLNASVTWRSSKTGVATVS AKGVVTAAGVGSTTITATSKADPTKSASITLTVTPQVVAQGLHYYSFDDSNANDSWGTRN GTADATAQYVDGKSGKALKVTDGKGVTLAGGNDIAKTDPWTIGYWVRSDAELTGRSAVMT SADGKYSADLKMDADRESGFRVGTASGDVLTFRYDFQPGTWYYIAWTQDKAAGLTMYVNG TKIGVTNTWTKMHDVVAPIDVIGGPGFTGLIDEVKIYKRVLSDTEIAAGMLLPGLNLAEH ETDMYIGGTYTIVANLQGGDGDGTVTFESSDPTIAKVDASGTVTGVSRGTAVITVRGGGF TDMVTVNVSRELTIKNTLPQYKLDQTKVTDVHKSLDTSNQYFGQPDMIRTKSGRLITSFP QGHGKGPLIMKISDDDGATWTRKTDIPASWAGSQETPTLYVLNLADGTERIMMITACPGW GTDSAGNRYGWNTSYSDDNGETWTEYRHWQSNRTYDNANNDAIVAMASLVQLKDSDGNDI QKWMGVYHNYAYVNFRTYLTFDENGDEQWSESEPYLAQWRSIESAYQMCEIGMFRSPDGK RIIGLARSQSHNNPATLIYSDDEGETWSKPMDLPGSLAGERHKIAYDPISGRLLVTFREI NYDLNGNNRFDGGNDWNAGDWVAWVGTYDQLINQEDGEYRILLAEDWTSNAKSGDTGYAG VAVLDDGTFIMDTYGHWDKEFSQNWPGGVTTDRCYIKQAKFKLGEVEYANGLIDRSGLKA AIKRAEALNAADYTADSWAKMDAAVEAAKAGDADESLQQAQVDALAAAIDAAIDGLKAKD DGDKPGPGDGGKPGAGDGKPDDGGKPDPGKPGKGDETKPDTGEKGGLSATGAGIVPIAVA ALTLMAGAALALAKR >gi|197324944|gb|DS990230.1| GENE 227 270602 - 271606 871 334 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1595 NR:ns ## KEGG: BBPR_1595 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 334 1 334 334 585 98.0 1e-165 MRNRVIHRDSPFRLLAAALAVLTLTLLAVMVPCEGEAHAAAPIKIACVGDSLTDGSKSSG GKKGDTAYPAWLGRILGSGYDVRNFGAAGDTLLRGTGWSYWDSAEFRQSKEFAPDIVIIM LGTNDSKDAYWNETLYRTEAKELVRVYRDLASRPVVYFASSPHSYRVAPGTKYVSVNSVN RLHPVQESLIRDERWNTIDLYAATANRRQLYDADGVHFNDDGYRFLAEQIAGVMHRSAQI IGSTGRERVIANETENGATKRAGVEFGLTSQGTTAGNAGDSSDGNGKRDALRGSDAVVAI IAMLSAGITGVALVLGGRSRHARVEGVRSRPYSI >gi|197324944|gb|DS990230.1| GENE 228 271814 - 272335 852 173 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283678|ref|ZP_03647000.1| 50S ribosomal protein L10 [Bifidobacterium bifidum NCIMB 41171] # 1 173 1 173 173 332 100 1e-89 MKRPEKEAVVAQLTEQFRNADAVYLTEYRGLTVPQVSELREKLGRDTSYTVAKNTLARIA AKEAGIEGLDDLLKGPTAITFVKGDFIEAAKTLRDFAKTNKALVISGGYADGTVYDGEGA TKLADMMSRPQLLSKFAGDLKATTAKAAYLFVAVPTKAVRTIDALREKQEKAA >gi|197324944|gb|DS990230.1| GENE 229 272435 - 272818 605 127 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283679|ref|ZP_03647001.1| 50S ribosomal protein L7/L12 [Bifidobacterium bifidum NCIMB 41171] # 1 127 1 127 127 237 100 5e-61 MAKYTNEELLEAFGEMTLVELSEFVKAFEEKFDVEAAAPAAVAVAAPAAGAAAEEEEKTE FDVVLTAVGDKKIQVIKAVKAITNAGLADAKAMVDGAPKAILEKAKKEDAEKAKAQLEEA GATVELK >gi|197324944|gb|DS990230.1| GENE 230 273111 - 274766 1496 551 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1592 NR:ns ## KEGG: BBPR_1592 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 551 1 551 551 815 98.0 0 MTGDQRTIQQWTVRIGGIDQKTVKPGDSIEIGRKPLRPLPDDGTERLEIADGTRSMSKRH ATFAVSQNGGGTVRDLGSTNGSYVVRGNGDLMRLPPNVDFLLPTSPMRLQFGDVPVDFIR VEQPVSDTFVVPDLFGYALETVKQEPDVADMSVDDILDLRAGEPTAAISAATVRKRVGEL NAAASQTFPPQKTTTADGLEADSAAGAAEPDSELAVSSDAAMPVEAAVLAKTVSPAEADA AESDAETKVPEAAESSENAAPADAVDAADAAVFTETATSDTASPETVTSGTVASESAADT VPADSAVSDSVVTAAQSQTNDEPSEPDSMPLNVADAKPAVALPRDLFADALAEDSEEAGQ STAPAEQADQLANGQPSDDRFQQASSDQEAHDDIRQAVNEVAANAAGVEVTAGAVAGDGV VKADTDTAHGEIPEEHRRFALPNDDEADSTGSFRPAFEPGSVFELVSKGRLAAAEPKIEV NGYTSDQAKTTEDYTEQFAIANCEELLPFLAMNPLLYDDLYNWLEDQGKADIDAALENNE GYKSYRKAVGK >gi|197324944|gb|DS990230.1| GENE 231 274775 - 278392 3762 1205 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1591 NR:ns ## KEGG: BBPR_1591 # Name: not_defined # Def: DNA and RNA helicase-like protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 1205 1 1205 1205 2326 99.0 0 MSESMQQAPQSLERMRQWHEQYRAGLVPSPLEDINQLGAKLDLTHAHPSGIAQLFAGGRA SLDLLFRDNGMLRAANRRLERVLDEKAAKLRVSGVAELSLTVGVATWDDGAMPVLLYPVS VQSAQDEGDVAVIRFVGHVRLNPAFVTVMREQHVELDERELFNGANYESGTPETSAVFAA ITKRAEKVFPDFTIERQIILGCFMSPGSLILAESQHIIDTLAEGATGNTVLDALAGSKEA AEALKDSGAPAFSPFDADPHNEFEVGDVDNAVRYAADMVAAGHSLGVDVVNGRDTADYAA AIASRCVMNGRSVLYVPCIADQKRRFRQAISANELSGQVLDVSDERCNDSIDHQLIAAVG FQPGVASSRFDQIADELVGVRSRLTRYLGDLHCTDKQWGVSAYQTIQNLAEIATLPAHPA TRVRLRKETAREIGGHLDEWAAKLRRAGELGEFTLGPEDTAWFKASITSEDEAVTVYQRV VDLLRKLLPLTREQVSSTVQTCGFPIPNTAQEWGRQVQVLKNLRRVLDVFQPEIFERDID AMIESSKSKAERKAEGTTIGFWERRRHIKEAKSLLRVGAQVENLHDALQVVAKQAAQWRM FVPHGGWPVLPNKLDDIIATQEELARDLTALDAVLSTTVQGGDLESQDFVAVEERLKALF DDHLALDTLPERCRLEHEFQTAGLTELVEDLHTRRVPVESVDAELQLAWWTTVFENIVRA SAIISNQDGSALQSAADRFAQVDTEHVRSVGPMVAQESMRRLCEMLFSRTQESNQLHTVL AGKTRIPLSRIRRDHPEILAAAKPIIVATPATLAALTDPTTLADVAIIDAAAHIPAIQLL TIVCRAKQVAVLAHRSTVTSPSVKALMELLPSVKVRSHPVRRAPRLAAFLESQGYGEVRY DVTTEPSQGRVAFHKVEANGTPVMATGLVESSQQEIDEVVRIITERAASFNVVPVGYTLT VVTLTDAFRSRLGAELKSLASKNKTMGQFLCHVRIVALPEIAGAQSTDVILSLCYAKTVH GRLLQQFGVLEGEGGRAMLLDALALCDRHLDIVSAFDESDLDDERLHQPGPQLLHAMLRW VEQLDDHVVRPVTITRSNNVLFNDLAERVRSRGLNAAVDYGFDRGLHIPMVVGLPDKPFA LAVLTDDAQFMSVQSTRERHRGLMQDLASLGWSVMSVWSVGAFVNPDKEVDAIVSRIGEI YGDVR >gi|197324944|gb|DS990230.1| GENE 232 278389 - 278643 175 84 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1531 NR:ns ## KEGG: BBIF_1531 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 84 1 84 84 135 100.0 5e-31 MSGDTTGDGDRVAADASEPRPYSASRRTRREHKRVVFHGTERFDADGVKLEPGDMRTEQQ READDDKRILGELPPHWAIFNDKR >gi|197324944|gb|DS990230.1| GENE 233 278745 - 279347 335 200 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1589 NR:ns ## KEGG: BBPR_1589 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 10 200 29 219 219 295 100.0 6e-79 MLRLTRRLMAACCTAIAAFATLQCVTASIVTQPVVVAARLIPRGARIGAEDVEIRQMPVS DGWDTALDAANQAAGGIAQTDIAAGQPLFGAIVSRRPVAEPGQTVIDVRVTGTVDGIAAG DVMDLVSGTPCDASAGTTSSRDESAGGRSCVLARSATAMDAAHDDAMTGGTLITFALTPD EAISIINAQELGPIMAVTAQ >gi|197324944|gb|DS990230.1| GENE 234 279556 - 279774 359 72 aa, chain - ## HITS:1 COG:MT1020 KEGG:ns NR:ns ## COG: MT1020 COG2331 # Protein_GI_number: 15840416 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Mycobacterium tuberculosis CDC1551 # 9 72 8 70 117 60 46.0 9e-10 MSFDQGGTVPTYHYRCKNCGYDFTEQQSFEDDPITVCPQCGQEQVRKVYSAVPIEFKGHG FYRTDGRGGSGK >gi|197324944|gb|DS990230.1| GENE 235 279904 - 280596 561 230 aa, chain - ## HITS:1 COG:ML0181 KEGG:ns NR:ns ## COG: ML0181 COG0212 # Protein_GI_number: 15826993 # Func_class: H Coenzyme transport and metabolism # Function: 5-formyltetrahydrofolate cyclo-ligase # Organism: Mycobacterium leprae # 20 225 6 187 197 80 33.0 3e-15 MNLCQRRQTTDADMSDDLRKRQLRRDAIARRKTVTRQERDAAAAALAEHIVPLLDLVGVQ AGTSGVMSAPHGRGHRPPTVAAYVSMGSEIPMRPLLSLLLDRGLRVLVPRLGSGLDVGWA LLPDMVSLHGVTCEGTGMAQRPDEPDTQTLGPAALGDADLIIVPALAVDAHGVRLGRGGG WYDRALTYRRGGVPVVAVCWPWECMADDLPRQSHDIPVDWVVTPQGARRL >gi|197324944|gb|DS990230.1| GENE 236 280619 - 281353 393 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|227385132|ref|ZP_03868523.1| acetyltransferase, ribosomal protein N-acetylase [Jonesia denitrificans DSM 20603] # 44 235 8 200 204 155 40 2e-36 MSVIGGRCAVSETRRWHNGCVSVLQSICAVFRQPAAPSIRVPRWIGIPQCPIKLRPITAD DEEEWNEVRWRNDAWLHPWESGDPMHGSPMTYNQWMQQMRHNEQTGRGVVFAIDYHEHIV GQISLGAIDLGSMRTGVIGYWVDQRYAGHGFAPMAVALLADWAFCDPTGPRLHRMEIALL PENERSRRVACKVGCHYEGVRPRYMFVNGQWRDHETYSLFAEDAGDGFIHRLIARHAMPE SVQS >gi|197324944|gb|DS990230.1| GENE 237 281378 - 282733 1146 451 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1526 NR:ns ## KEGG: BBIF_1526 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 451 1 451 451 565 98.0 1e-159 MGYESLSTVVVLVILMVIAVGWLPRRTVNSMKKVAEHRQDRYSSSLHLVDADSGTRFSDE HTPQPKGAIMQRAQTSTTTPTTAKVAHIRELRRAAVRRRRILALSLLLITVLVLVLSMVL PFSALFALIPGVLLAVVLALGVRASSQARRWEHALAEARRRERLAKRAGASARPRAKSPS QAKSTSPDKSAAKAIADTADDQVTATANPSAETEVKTDVMERREIRQALHRARIEQDRAL AAREARQKAHAMAASENGRHDVDAASEQPEAAVTSAVQPEPRQDAVAQPSADESATNVVE PADSHAEVVVEEGSAPSGGDMTTELDRVHPAAALDAFEVAASQDLISFSLGEPRNGVDRH APAPESLEIKSTKQVAKAVPALVAEQPTIVDGGDAGQSDADATVAAVMDDASVNDTDAFH QTEVRSSVDAPDASSDSLGTGLEAILARRSS >gi|197324944|gb|DS990230.1| GENE 238 282909 - 283202 517 97 aa, chain + ## HITS:1 COG:MT3527 KEGG:ns NR:ns ## COG: MT3527 COG0234 # Protein_GI_number: 15843014 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Co-chaperonin GroES (HSP10) # Organism: Mycobacterium tuberculosis CDC1551 # 3 96 4 98 100 118 66.0 2e-27 MSIKLTPLEDKIIVKQAAAETQTASGLFIPDNAKEKPQQGEVLAVGPGRRDDKGERIPMD VKVGDKVLYSKYGGTEVHYEGEDYLIVSSRDVLAILG >gi|197324944|gb|DS990230.1| GENE 239 283399 - 284157 925 252 aa, chain + ## HITS:1 COG:FN1584 KEGG:ns NR:ns ## COG: FN1584 COG2367 # Protein_GI_number: 19704905 # Func_class: V Defense mechanisms # Function: Beta-lactamase class A # Organism: Fusobacterium nucleatum # 21 252 8 260 264 87 25.0 2e-17 MPAPAAPKEPDPSETRVAAVKQVLDTKLAQYGGTWSAPYIDLERGRDVTVNDEKLVAASL VKLYIMLAVFDGIEHDTITDDANVDALLKQMITVSSNEAANGLLSRIGNGDGKAAIATVT ATAQRYGFTSSEELRTLTGMASGNAVENWTSTRDCGSFLSQVYAGTLVSKNASERMMQLL LGQTRRTKIPAGVPSGVKVANKTGELAAVQNDVAIVFGTHPYVLAVMSSDISSAVAPSQI TELSRAVWDAAQ >gi|197324944|gb|DS990230.1| GENE 240 284095 - 284292 78 65 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MSPMTAADMAGVSIAMSSSAPPLLSIPVARTTPVGPADSPRQRVRLLCGVPYGAGQFGDL AWGHG >gi|197324944|gb|DS990230.1| GENE 241 284267 - 284560 244 97 aa, chain + ## HITS:1 COG:PH0776 KEGG:ns NR:ns ## COG: PH0776 COG0714 # Protein_GI_number: 14590644 # Func_class: R General function prediction only # Function: MoxR-like ATPases # Organism: Pyrococcus horikoshii # 20 85 218 283 314 64 42.0 5e-11 MSAAVIGDIIDALAGVLSCSREVIELAVMTLSAATRDAQGVRFGVSPRGSLNVAAMTRAR ALMQGRDFVMADDVRSVVVPVLAHRGCAGIDAGCGSA >gi|197324944|gb|DS990230.1| GENE 242 284560 - 285042 93 160 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283691|ref|ZP_03647013.1| ## NR: gi|224283691|ref|ZP_03647013.1| hypothetical protein BbifN4_07667 [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 160 6 165 165 248 100.0 1e-64 MEAVGETGSPDATNGMGRAWRAAWREACDSAWGAGVRWSPVDTERGIAGRIAECLEAVTP EGESDFGAYLAELADHVTAGASDVRRAVAGTVARVVRPVRRRRETTRQCGLADVQMAVPG VIAQKNMMRVSKVRCRDTLEILATCRARHASCKSWRLVFR >gi|197324944|gb|DS990230.1| GENE 243 285365 - 285535 303 56 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283692|ref|ZP_03647014.1| 50S ribosomal protein L33 [Bifidobacterium bifidum NCIMB 41171] # 1 56 1 56 56 121 100 6e-26 MASKSADIRPGITLACTECKERNYITTKNRRNTPDRLELKKFCPRCGKQTVHRETR >gi|197324944|gb|DS990230.1| GENE 244 285654 - 286868 1360 404 aa, chain + ## HITS:1 COG:Cgl0393 KEGG:ns NR:ns ## COG: Cgl0393 COG0812 # Protein_GI_number: 19551643 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramate dehydrogenase # Organism: Corynebacterium glutamicum # 3 403 23 366 368 195 35.0 1e-49 MTSFADLTTIGVGGHIARFIEPTSRVGVIEAVEDADSKGLPLCVIGGGSNLLVADGPFNG VVVRDARRQITVPDEAAPVENGERIVHVNAEAGCNWDDFVAFTVELGLEGVEGLSGIPGT VGASVVQNIGAYGQEVAGAVESVEAWDRRDKRTLDIAAADMGFGYRMSALKTSMYQAPAV PAGEFFPTPRYVVLSVTFALRHSTTGTVGYGQLAKALGVEVGDRMETAAIRNAVLKVRAA KGMLEDAARYLQPAMAGTKRDVNVRIALEAQRRQLAAGADTPVVRDPDRHSCGSFFMNPV LPADAADRLPQDAPRFPATLPDGTAGVKTSAAWLIDHAGFHKGFKVDESSPAGLSTLHTL ALTNRGDAAASDIAALAHAVQDGVEAAFGVRLVPEPVVVGMDLR >gi|197324944|gb|DS990230.1| GENE 245 286993 - 287316 437 107 aa, chain + ## HITS:1 COG:Cgl2895 KEGG:ns NR:ns ## COG: Cgl2895 COG1146 # Protein_GI_number: 19554145 # Func_class: C Energy production and conversion # Function: Ferredoxin # Organism: Corynebacterium glutamicum # 1 107 1 107 107 135 67.0 2e-32 MPYVIAQPCVDVKDKACVDECPVDCIYEGSRSLYINPNECVDCGACEPVCPTEAIFYEDD LPDEWAWYKDAAVSFFAEVGDFGGASAHGPIGHDPEQVAALPPQNQD >gi|197324944|gb|DS990230.1| GENE 246 287435 - 288613 1210 392 aa, chain + ## HITS:1 COG:ML1488 KEGG:ns NR:ns ## COG: ML1488 COG0436 # Protein_GI_number: 15827783 # Func_class: E Amino acid transport and metabolism # Function: Aspartate/tyrosine/aromatic aminotransferase # Organism: Mycobacterium leprae # 10 391 14 367 367 228 39.0 1e-59 MGFHAYSSPYDWSRIAPYKTKAAQVPGGIVDLSVGSPVDPVPQSVREALAVASDAKNAHG YPVTAGSGDLRDAIFEWFRAVRGVDLQSINADVVPTVGSKEAVALMASLLHLGEGDVVVQ PKVSYPTYEIGTQLAGASVLKVDDVSDVDSWCHVPGVKAVWVNSPCNPTGGVLSGGWLSD IVAAARRIGAVVLSDECYALMCWSSNSRDFHVDGAGAGASTPVSLATSPCALNTAVCDGT ADRILVLYSLSKQSNMAGYRTAFIAGDAGLVHEMSAYRKQIGQIIPGPVQSAMAAGLRDF DAAKTQWTRYRRRLKTLVGALRSAGYDARMPQGALYVWVRAKSGDCWRDMDDLAALGIIA SPGEFYGAPECLRFSATASDDAVADAARRLSR >gi|197324944|gb|DS990230.1| GENE 247 288637 - 289929 1118 430 aa, chain - ## HITS:1 COG:SMa2355 KEGG:ns NR:ns ## COG: SMa2355 COG0389 # Protein_GI_number: 16263727 # Func_class: L Replication, recombination and repair # Function: Nucleotidyltransferase/DNA polymerase involved in DNA repair # Organism: Sinorhizobium meliloti # 23 374 29 364 379 216 38.0 8e-56 MSTAPRLAAAKRDWGHDETGCTVLHIDMDAFYASLEVARHPELKGKPVIIGTGTRSVVSA ASYEARRYGVNSAMASARARQLCPDGVFLPVDMHYYRMMSRRIVEEVFSQVTDRFEQVSV DEAYMDVSGALLAWQRPTRIGAWIRQEVASRFHVTCSVGVAANKLVAKMASTNAKPDGML LIPVARHAEFVQMMPLRGIPGIGPSLERRLAEWGVKTVADLAKMSEQTLATAIGSQTMAH GLYMAARGMDERAVTPYTPEKSIGSESTFPEDTRDMRRVCDLLRRCCDEVASSLRRRGLV ARTVTVKLRFADLSYKSMSHTMERAEDTAAALYPQSVELLCRMLGIEGGVAAMRSPGTPL PRDIRLAGMSASGLARSAGSTVQPTLDDVLEETEAQSAGTVTRSARQRDAEQALDAIRRK YGKGAASLGL >gi|197324944|gb|DS990230.1| GENE 248 290512 - 290679 104 55 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRKPVVHNPRDRPSGQGAPSLIAKQGGRRYAIVRPSPSSHSTPFVYRDTMMSSFT >gi|197324944|gb|DS990230.1| GENE 249 290853 - 292196 1800 447 aa, chain + ## HITS:1 COG:SPy0818 KEGG:ns NR:ns ## COG: SPy0818 COG2843 # Protein_GI_number: 15674859 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) # Organism: Streptococcus pyogenes M1 GAS # 84 347 79 330 430 105 29.0 2e-22 MGHIRGKGHHRTTASHSPVRALVVVLVIVAVLVGGGWLVVRHMQAAAPVAKPDKAATVTR VDLDNKQAVPEPVVEHHGNSPDCPDTDCISMLVNGDLLFHPNLWKHFAGANTAATDGTAF DFTPLFETMKPYIQASDIAVCEFETPIAKRGGPYTGYPVFNVPPEVADAAASVGYTACTH ATNHSWDRGADGIARLWDTLASKGIAQTGSYKTEEDSTKPLVIDSPTGGGKLGLVTGTVS LNGMTADHDWQVDRLREAGDPQHQSDIDRAVAKAKAAREQGADVVAMAMHSVQEYIDYAD SWQVSEAHELADTGAFDVIYGAGCHCAQPIENYNGTWIIYGLGNTVTVSAPASRIVNNQG VTARIQFAGRKGVAGAWRVSRIDWVPTANMRQGSYQWCPISSDHPNGTCWSESQDAQVRQ RIWNVIYSMGADKNVVKEWNITDENRS >gi|197324944|gb|DS990230.1| GENE 250 292180 - 292818 465 212 aa, chain + ## HITS:1 COG:SPy1617 KEGG:ns NR:ns ## COG: SPy1617 COG1739 # Protein_GI_number: 15675495 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Streptococcus pyogenes M1 GAS # 19 182 18 179 210 115 40.0 5e-26 MKTVLDTSDRPAHDALVEKKSEFIADVCHVDALDEALLFVDSVRQLHPKARHVAYAAICV DGDGRVRERMSDDGEPSGTAGKPILDVLRQGDLMNCAVTVTRYFGGILLGSGGLIRAYSS AASLGVKVARLASIETCRRYTTALQYPQFDVFRQLASDCGAALENERYSDRVVLDAVVPV EREREFFRRVREAFSATVTPESGELISRPVAI >gi|197324944|gb|DS990230.1| GENE 251 292909 - 293643 767 244 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1515 NR:ns ## KEGG: BBIF_1515 # Name: not_defined # Def: hypothetical protein with leucine rich repeat # Organism: B.bifidum # Pathway: not_defined # 1 244 1 244 244 379 99.0 1e-104 MVRFGDPSGMVMTMSEMQRHDDEATVREATAQTAAQSQPDSATDSTPFEPLTATYERLRH STDSAELSGFARRPLPDRSDQAAFSRATALLEAVAGNRHTPLEDRIMLAETMPFPNILVK LSTDPSPDVRRAVAANEDDKNWLVGRLTKDEVPEVRDAALRNKRTSWKMRLEGAQNTDLD ADTLDVLSRLGVSEESGAPAILATMVRRAVALNPGTSQETLDRLRDDPSPEVAKAAASRT SDAS >gi|197324944|gb|DS990230.1| GENE 252 293816 - 295984 2793 722 aa, chain + ## HITS:1 COG:MT1831 KEGG:ns NR:ns ## COG: MT1831 COG1640 # Protein_GI_number: 15841250 # Func_class: G Carbohydrate transport and metabolism # Function: 4-alpha-glucanotransferase # Organism: Mycobacterium tuberculosis CDC1551 # 11 721 4 715 724 495 40.0 1e-139 MTESTESAERLARPLIHLARLVGLATSYIGMSDDYHEIDDDVLKALLGALGVDAHDDDAI DDSVVRILRERHGRLVAPTVLHVVGKEDRVLLNTGIMQIPSATITLENGDEYQGALEPGA GDGSQAYEVDGKFVATASITIPADLPMGYHTLHVSVGDRTQDATLISAPERIPMLPAMEH DQLWGWMAQLYSIRSAGSWGVGDFEDLKTLMVDSHSKTGADFMLVNPLHACEPVAPLTPS PYLPISRRFINFTYIRPEAIEEYAGLGDDLKSQIGELHAQAEPLNGDAQIIDRDSMWRVK MHALWLIFKAGRSEERQKAFDDYKSTSAEGLEAYATWCLCYDKWGAPTGEADSWEKRLDK NSEEVQGLRRQFPDTLDFYRWLEWIADEQLGAAQQAAKDAGMQIGLMADMAVGVHPSGSD VWWNPECFAKGATVGAPPDYFNQQGQDWSQPPLNPIELENTGYLTYRHMVQGMFAHAGAV RIDHILGLFRLWWIPSGHTPKDGAYVQYDSEIMLGILALEASRAHGVVVGEDLGVVPDHV STSLSAHQVLGCAVEWFEQMDGKFRAPKDWREFSLASVNTHDLPPAAGYLAYEHVELRER LGLIEGSVEDFEQNARAEHKAMMVMLIVNGYLDPDLLKDEKAHEQEIVEALYRGLRGSPC KLLAASIVDGVGERRAQNQPGTNNEYPNWRIPLADGKGNVVPLEELFSNTRLLSLAKVMQ GR >gi|197324944|gb|DS990230.1| GENE 253 296247 - 296696 767 149 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283701|ref|ZP_03647023.1| 50S ribosomal protein L13 [Bifidobacterium bifidum NCIMB 41171] # 1 149 1 149 149 300 99 9e-80 MKTFTPKPADLTHDWYIIDATDVVLGRLATQVATLLRGKNKPTYAPHADSGNHVIIINAD KIALTGNKMGKELYSHSGRPGGLRRDSYAELLANKPERIIKAAVKGMLPKNRLSKVQLDR LRIFRGAEHPHTPQQPQVFEIAQVSQQAK >gi|197324944|gb|DS990230.1| GENE 254 296718 - 297209 813 163 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283702|ref|ZP_03647024.1| 30S ribosomal protein S9 [Bifidobacterium bifidum NCIMB 41171] # 1 163 1 163 163 317 100 4e-85 MAENTNDSAVQATEEELTSYTTETNAGAGTGTSAIAPGYGTGRRKEAVARVRLVPGTGKW TINKRTLEEYFPSKLLQREVNSPIVLLKLEGKFDAIVLVDGGGTTGQAGAIRLGVARALN AIDRDANRAALKKAGMLTRDSRVVERKKAGLHKARRAPQFSKR >gi|197324944|gb|DS990230.1| GENE 255 297288 - 299873 3204 861 aa, chain - ## HITS:1 COG:RSp0238 KEGG:ns NR:ns ## COG: RSp0238 COG1523 # Protein_GI_number: 17548459 # Func_class: G Carbohydrate transport and metabolism # Function: Type II secretory pathway, pullulanase PulA and related glycosidases # Organism: Ralstonia solanacearum # 103 724 62 659 754 457 41.0 1e-128 MKHAIPQRYAIPHRYATRPGLYFTEDGGADVIVRSETADQVWLCIYEKVDQPTAFFNDAI RIFDDSATPFINEIHEHAVCTRIIEPMYVRETLFRMDGPNYGLWYVHLPKAWDGMRYAYR VDGAWDPSKGLRFNPYKLLLDPYGKGIDGRMKLSPAAFSYQCDVSEDGKVRGSAFGPMST VDALGNMPVSVAIDDRDKTKHDADPSHPHVPWSKTVLYELHVKGFTANAPWLPKELRGTY AGLAHPTTLSYLQSLGVTSIELLPIQAKQDELFLQERGRHNYWGYSPLSYFSPEPSYATA EAQRKGARAVRDEVIGMVRALHEAGFEVIMDVVYNHTCEGGVEGPTTCWRGLDALLYYRR QKGNIGRLEDTTGCGNTFDFTNTHVVTFAVDSLRYWAKRIGIDGFRFDLGVSLARLDGDF TKHHPFLYALRSDLLLGNLKLIMEPWDLGPQGWRTGGFGMPFSEWNDRFRDTVRRFWITD TQPGAPSGIGMQEMATRLCGSSDLFATEPGRGCVSSINYVSCHDGFTLTDLTRYAVKHNE ANGENNIDGSNVNHSANFGVEGPSDDPAIIRKREQAAMNMLGTLMLSLGTPMMLAGDEFG NSQSGNNNAYAQDNDITWLNWDWMYQTRKTMQMHRLDTVSRLLSIRKSLGLYHHEEFFTR LTQLGLFKPSSRVQWYLPDGTTPMDRDWFDTTIRSFAMRLLSQDEVDVLIVINGVDEVRR FTLPSDCSWQCDWSSATAVGLRPAPGDRLQRIGKNQALRSNWTMSVSEKDNIHQLLKTIQ ASLAEQDKLDLFGATTEHADVLFEDDEQAPGVGADVSATMSAASTVHGASASARDDGDAT VNGSAVWTMPALSISVMRRLQ >gi|197324944|gb|DS990230.1| GENE 256 299870 - 301087 1339 405 aa, chain - ## HITS:1 COG:CAC3673 KEGG:ns NR:ns ## COG: CAC3673 COG1940 # Protein_GI_number: 15896905 # Func_class: K Transcription; G Carbohydrate transport and metabolism # Function: Transcriptional regulator/sugar kinase # Organism: Clostridium acetobutylicum # 13 369 3 371 385 100 25.0 7e-21 MTTTDTDIATTRNITKTRNRQAIIRHLATHGNVTKRQLQLDLQLSLPTITGNIRALEHDG IITPGPLTDSTGGRKSQSYRFNPSHRTAIGVTMHRSTLRLCAIDLQGRPIATLSRTLPYA NANAYYQRMGSAINDFAAETEKAHGPVLGVSFAIPGAISADGTVITFNDSTGATGVTIDT IAQSVRYPRQLIREAAAIAMTETLHDTAISDAICLYLNRRPSGALIMNGRLHRGPNLCDG AIEHMTLIPGGKPCHCGRRGCMAAYCSPENLPEDYESIPGFFSVLEQGETHHRERMNDWL DHVALAIANVRCVICADVVIGGEAALYLDHDNIADLQRRVTALSVFGTDHFTLRLSRSDE NSGAIGAAMQFTDPYMDALCGWNTGPHPSSPAPTRTKIDTATMGV >gi|197324944|gb|DS990230.1| GENE 257 301206 - 301322 87 38 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCLGNSFDGVRCRKKRTKDIISWNIGSKTGLNLTNSNR >gi|197324944|gb|DS990230.1| GENE 258 301498 - 304230 4184 910 aa, chain + ## HITS:1 COG:SP2026_1 KEGG:ns NR:ns ## COG: SP2026_1 COG1012 # Protein_GI_number: 15901847 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Streptococcus pneumoniae TIGR4 # 14 466 8 463 464 540 61.0 1e-153 MAEATQVEAPAKPSPEEKRAAAEAEVDALVKKGLKALDEFEKLDQKQVDRIVAKASVAAL NKHLVLAKMAVDETGRGLVEDKATKNIFACEHVTHYMAGQKTVGLIREDEVMGIDEVAEP VGVVAGVTPVTNPTSTAIFKSLLALKTRCPIVFGFHPGAQKSSVAAAKIVRDAAIEAGAP ENCVQWIEHPSIEATGALMKHPGVATILATGGPGMVKAAYSSGKPALGVGAGNAPAYIDT DVDIERAANDLILSKHFDYGMICATEQAIIAHKDVYAPLVKELKRRKAYFVNADEKAKLE QYMFGCTAGSGQKPVLNSVVPGKSPQFIAKAAGFEIPADATILAAECKEVSDDEPLTHEK LAPVQAVLKADDKEQAFEMCEKMLKLGAGHTAAIHTNNEALVREYGLRMHACRIIWNQPS SLGGIGDIYNAIAPSLTLGCGSYGGNSVSGNVQAVNLINIKRIARRNNNMQWFKIPAKTY FEPNAIKYLRDMHGIEKAVIVCDKVMEQLGIVDKVIDQLRARDNRVTFRIIDYVEPEPSV ETVERGAEMMREEFEPDTIIAVGGGSPMDAAKIMWLLYEHPEISFSDVREKFFDIRKRAF RIPPLGEKAKLVCIPTSSGTGSEVTPFAVITDHKTGYKYPITDYALTPSVAIVDPVLART QPRKLASDAGFDALTHSMEAYVSVYANDFTDGMALHAAKLIWDNLAESVNGEPGLAKTDA QEKMHNAATMAGMAFGSAFLGMCHGMAHTIGALCHIAHGRTNSILLPYVIRYNGAVPEEP TSWPKYNKYVADKRYQDIARIIGIDPGKTPAEGVENLAKAVEDYRDNKLGMNKSFQDCGV EEDYFWSVLDQIGMRAYEDQCTPANPRIPMIEDMKDIAVAAYYGVPQAEGHKIRVEREGV AATEEASERV >gi|197324944|gb|DS990230.1| GENE 259 304424 - 305278 866 284 aa, chain - ## HITS:1 COG:SA2394 KEGG:ns NR:ns ## COG: SA2394 COG3527 # Protein_GI_number: 15928187 # Func_class: Q Secondary metabolites biosynthesis, transport and catabolism # Function: Alpha-acetolactate decarboxylase # Organism: Staphylococcus aureus N315 # 47 278 3 234 234 168 39.0 9e-42 MFVRQVTAQALPYVKPALKRPACCIIVITVTKSQAAQIKPITAHHANQLYQHGTLALLVP GLLEGTTTIGELLTHGDTGIGTGEGLDGELIILDGVAYKVGQSGVAERVPDDFTMPFANV HHAAFQYQCERRDIGLEDLNNRIVEANGRANTFFSVIVRGTFSFIKTRAVIKQQAPYPTL VEVADRQAMFLRHDVKGTMLGYFSPEMFHGAAVAGFHEHFLSDDRTFGGHVLDAVLDHGK IYSQVFDTLVQHLPVDDPEYRNHDFRHDPIAEAITAAEGDKAGN >gi|197324944|gb|DS990230.1| GENE 260 305329 - 306249 542 306 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1506 NR:ns ## KEGG: BBIF_1506 # Name: not_defined # Def: hypothetical protein, containing bacterial Ig-like domain (group 3) # Organism: B.bifidum # Pathway: not_defined # 1 215 1 271 303 352 73.0 1e-95 MTTNLGETFRLALAALRSTVGDAKFREIEKTWVQEHQEQFDPTGLKITATYSDKSTKAID PTDEAVTYHYDFAKPSGAAKITVTYDGQTASFTVKVTADAGNKTGNNPKQQASPVQNGNA VAVLATSMMTVVIASFGDRMLPLCGAGGSQVSCDAVAQYRQGIRALPDWRSWTDAQAWWP AYSVPKAALTAAIVFALTQYGSVLFVKTMIREYGKRSYLVASWVWHAALAITGFAVNMWL GVVAVVLLTRSVAIPLRFRGQRETDDRRRHRSDVPATGVHSGHHHLSSPGIAAIRLPLPI RLPPRP >gi|197324944|gb|DS990230.1| GENE 261 306917 - 307225 520 102 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154486746|ref|ZP_02028153.1| hypothetical protein BIFADO_00571 [Bifidobacterium adolescentis L2-32] # 1 102 1 102 102 204 100 4e-51 MAGQKIRIRLKSYDHEVIDQSAKKIVETVTNAGATVVGPVPLPTEKNVFVVIRSPHKYKD SREHFEMRTHKRLIDIVDPTPKAVDSLMHIDLPADVNIEIKL >gi|197324944|gb|DS990230.1| GENE 262 307242 - 307895 1116 217 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171] # 1 217 1 217 217 434 100 1e-120 MTSQRGSHKALLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYG QIDPTKVTKPLAGHFAKAGVTPRRHLVEVRTEDAAEYEPGQELSIDAFAEGSEVDVTGTT KGKGFAGTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQ SLTVMSADAENNVLAIKGAIPGPKGGIVLVRTAVKGA >gi|197324944|gb|DS990230.1| GENE 263 307901 - 308566 1140 221 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283710|ref|ZP_03647032.1| 50S ribosomal protein L4 [Bifidobacterium bifidum NCIMB 41171] # 1 221 1 221 221 443 100 1e-123 MANVTLNVTDGKGQATGSVEVPAELFGHTADEVQAHVPLIHQVVVAQLAAARQGTHATKT RGMVSGGGKKPWKQKGTGRARQGSIRAPQWYHGGTVFGPQPRDYSQRTPKKMKAAALRYV LSDRVNAGRVVVVDFGVTDTPSTKAAIAALTPVTENKFTTVVFSRDNVNEWLSVRNIPTV HPIFADQLNTYDVVTAQYVVFTKEGLEAFVDAKTKPAAKEA >gi|197324944|gb|DS990230.1| GENE 264 308569 - 308865 487 98 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283711|ref|ZP_03647033.1| 50S ribosomal protein L23 [Bifidobacterium bifidum NCIMB 41171] # 1 98 1 98 98 192 100 3e-47 MVAIHKPAHDIILKPVVSEKSYALSDRGQYTFVVAPNANKVQIKQAIEEIFKVKVTNVNT LNRAGKRQRTRTGFGQRVSQKRAIVTVAEGQSIDIFGN >gi|197324944|gb|DS990230.1| GENE 265 308902 - 309732 1458 276 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283712|ref|ZP_03647034.1| 50S ribosomal protein L2 [Bifidobacterium bifidum NCIMB 41171] # 1 276 1 276 276 566 100 1e-160 MAIRVYKPTTAGRRNASVSDFSELTRTTPEKSLVRKLSKTGGRNSYGRMTSRHRGGGHKR QYRLIDFKRWDKDGVPAKVAHIEYDPNRTARIALLHYADGEKRYIIAPEGIKQGDTIETG EKADIKPGNNLPLKNIPTGTIVHAIELRPLGGAKIARSAGAAVQLVAKDGAYAQLRMPSG EIRNVDARCRATIGEVGNSEHANIQLGKAGRARWMGKRPWTRGESMNPVDHPHGGRTRGG KPPVSPWGKGEVRTRRPKKASNKMIVRRRPNGKNRK >gi|197324944|gb|DS990230.1| GENE 266 309748 - 310026 490 92 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|23336505|ref|ZP_00121719.1| COG0185: Ribosomal protein S19 [Bifidobacterium longum DJO10A] # 1 92 1 92 92 193 100 1e-47 MTRSIKKGPFVDAHLQKKVDEQNEKGTKNVIKTWSRRSMITPDFIGHTFAVHDGRKHVPV FVTEAMVGHKLGEFAPTKTFKGHVKDDKKARR >gi|197324944|gb|DS990230.1| GENE 267 310042 - 310401 580 119 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283714|ref|ZP_03647036.1| 50S ribosomal protein L22 [Bifidobacterium bifidum NCIMB 41171] # 1 119 1 119 119 228 100 4e-58 MEAKAIARHVRVTPRKARRMVDLIRGKKATEAVTILKFAPQAAALPVRKVLESAIANARV KADKAGEPFRENDLVVKTTYVDEGVTLKRFRARAQGRAARINKRTSHITVIVANKEGDR >gi|197324944|gb|DS990230.1| GENE 268 310403 - 311221 1368 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283715|ref|ZP_03647037.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171] # 1 272 1 272 272 531 100 1e-149 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYSDFVLEDDKIRKVMNKDLERAGVSRIV IERTRDRVRVDIHAARPGIVIGRRGAEAEKVRAKLEKLTGKQVQLNIFEVKNAALDAQLV AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQNNNRQGRRGDRRPRRGN RAAGAQQKAATEAAPAEAQAAAEAPAATETKE >gi|197324944|gb|DS990230.1| GENE 269 311226 - 311645 731 139 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283716|ref|ZP_03647038.1| 50S ribosomal protein L16 [Bifidobacterium bifidum NCIMB 41171] # 1 139 1 139 139 286 100 1e-75 MLIPKRTKYRKQHRPGRSGMSKGGTEIAFGDYGIQALAPAYVTNRQIEAARIAMTRYIKR GGRVWINIFPDRPLTKHPLGARMGSGKGTPEFWIANIHPGRVMFEIGGVSEEVAREALRR AIDKLPMKCRIIAREGGDI >gi|197324944|gb|DS990230.1| GENE 270 311645 - 311902 421 85 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283717|ref|ZP_03647039.1| 50S ribosomal protein L29 [Bifidobacterium bifidum NCIMB 41171] # 1 85 1 85 85 166 100 1e-39 MAVGTADYAIKNLNEKTNAEIEGFLKKSKEELFNLRFQAATGQLDNTARLKAVKHDIARM YTVLRERELGISQEPEATETKSEEK >gi|197324944|gb|DS990230.1| GENE 271 311905 - 312171 448 88 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283718|ref|ZP_03647040.1| ribosomal protein S17 [Bifidobacterium bifidum NCIMB 41171] # 1 88 1 88 88 177 100 9e-43 MADTTERNFRKVRRGYVVSEAMDKTITVELEQRSTHPLYGKVVRSTKKVKAHDEHNDAHV GDLVSIMETRPLSKTKRWRLESIIERAK >gi|197324944|gb|DS990230.1| GENE 272 312264 - 312632 602 122 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283719|ref|ZP_03647041.1| 50S ribosomal protein L14 [Bifidobacterium bifidum NCIMB 41171] # 1 122 1 122 122 236 100 1e-60 MIQQETRLHVADNTGAKELLAIRVLGGSKRRYAGLGDVIVASVKDAIPGGSVKKGDVVKA VVVRTVKEHRRVDGSYIKFDENAAVILGSGREPKGTRIFGPIARELRDKRFMRIVSLAPE VI >gi|197324944|gb|DS990230.1| GENE 273 312634 - 312969 545 111 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283720|ref|ZP_03647042.1| ribosomal protein L24 [Bifidobacterium bifidum NCIMB 41171] # 1 111 1 111 111 214 100 5e-54 MVAKIKSGDLVKVIRGKDRGKEGTVTRVLPNDRLIVEGVQIVKKHVRATQQGQQSGIVSV EAPIHRSNVMLVDPETKEPTRVGVNVKQEARDGKVKTVRVRVAKKSGKELA >gi|197324944|gb|DS990230.1| GENE 274 312966 - 313538 971 190 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283721|ref|ZP_03647043.1| 50S ribosomal protein L5 [Bifidobacterium bifidum NCIMB 41171] # 1 190 1 190 190 378 100 1e-103 MTDSTIEAPATPRLKQQYKDVIVPELEKEFKYSNPMQVARVQKVVVSMGVGAAARDSKLI EGAVKDLTLITGQKPKITKAKKSVAQFHLREGQAIGAYVTLRGDRMWEFLDRLLTLALPR IRDFRGINGKQFDGQGNYNFGLTEQSMFHEIDPDSIDHQRGMDITVVTSTKDDKEASVLL KHLGFPFKEN >gi|197324944|gb|DS990230.1| GENE 275 313540 - 313725 333 61 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|23336514|ref|ZP_00121728.1| COG0199: Ribosomal protein S14 [Bifidobacterium longum DJO10A] # 1 61 1 61 61 132 100 2e-29 MAKTALKNKAAGKPKFKVRAYTRCQVCGRPHSVYRKFGLCRICLREKAHRGELPGVTKSS W >gi|197324944|gb|DS990230.1| GENE 276 313815 - 314213 671 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283723|ref|ZP_03647045.1| 30S ribosomal protein S8 [Bifidobacterium bifidum NCIMB 41171] # 1 132 1 132 132 263 100 1e-68 MTMTDPIADMLTRLRNASAAKHETVEMPYSKFKANIAEILKREGYIKDFTAKEAKVGQDL EVTLKYGPNGERSIQGIKRISKPGLRRYAKSDSLPMPLGGLGIAIISTSSGLMTQKECLD RGIGGEIVAYVW >gi|197324944|gb|DS990230.1| GENE 277 314231 - 314770 903 179 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283724|ref|ZP_03647046.1| 50S ribosomal protein L6 [Bifidobacterium bifidum NCIMB 41171] # 1 179 1 179 179 352 100 2e-95 MASHIGKLPVTIPAGVEVAIEGQNFSAKGAKGSDSYVIPEGITAQVEGNEIILTAADDLR PTRAKHGLSRSIIASMVKGVHDGFEKRLLIVGTGYRAVAKGKGIEFSLGYSHTITVNPPE GITFELPNANEVVVKGTDKQVVGQVAANIRKLRAPEPYKGKGIKYADERILRKAGKAGK >gi|197324944|gb|DS990230.1| GENE 278 314772 - 315143 603 123 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283725|ref|ZP_03647047.1| 50S ribosomal protein L18 [Bifidobacterium bifidum NCIMB 41171] # 1 123 1 123 123 236 100 9e-61 MSVKILGKGKKVARLRRHARLRKKVVGTPERPRLVVTRSNRHMVAQIVDDTKGHTLVSAS TLTAEFAGFEGTKSEAAKKVGLLVAEKAKAAGIEQVVFDRGGNKYTGRVAAVADGAREGG LAL >gi|197324944|gb|DS990230.1| GENE 279 315140 - 315874 1220 244 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283726|ref|ZP_03647048.1| 30S ribosomal protein S5 [Bifidobacterium bifidum NCIMB 41171] # 1 244 1 244 244 474 99 1e-132 MSDNEVKETQVAEETQNTAAPENNNNDERKSRRGQRGEGRRGERRNRREENHGDEMLDRV VTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDAKKHMFTVP RIRGTVTHPVIGHDAAGTVLLRPAAPGTGVIAGGPVRAVMECAGITDILTKSMGSATAVN MVRATVAALKQLEEPEEIAARRGLALNEVAPDAMLRARAAGIAEAKKAREEAQAKAAAEQ KDGE >gi|197324944|gb|DS990230.1| GENE 280 315874 - 316056 296 60 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283727|ref|ZP_03647049.1| ribosomal protein L30 [Bifidobacterium bifidum NCIMB 41171] # 1 60 1 60 60 118 100 4e-25 MANLKITLHHGLVNRTPKQRATAQSLGLRKIGQSVIREDNSVTRGMILTVRHLVTVEEAD >gi|197324944|gb|DS990230.1| GENE 281 316059 - 316514 767 151 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283728|ref|ZP_03647050.1| 50S ribosomal protein L15 [Bifidobacterium bifidum NCIMB 41171] # 1 151 1 151 151 300 100 9e-80 MANEDELLQMHNLKPAPGAKKDRTRIGRGEGSKGKTSGRGDKGTKKRYQVRPGFEGGQLP LYMRLPKLRGFKSPFKKEYQVVNVSALGELFPEGGEVTVDALVAKGAVRGGFPVKVLGDG DITVAVTVKGAKASASAKAKIEAAGGSVSEN >gi|197324944|gb|DS990230.1| GENE 282 316717 - 318051 838 444 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163796899|ref|ZP_02190856.1| 30S ribosomal protein S11 [alpha proteobacterium BAL199] # 9 435 19 437 447 327 41 5e-88 MRTLIQAFRTKELRNKILFTLAMIIIYRIGSFIPTPGVNYKTVQDCINTLSGSQENFIGL ANLFSGGAMLQLSIFALGVMPYITASIVVQLLRVVIPRFEALHKEGQSGEAKLTQYTRYL TIGLAVLQSTTILVTAQSGALFNNMCSSPIPDNSVWNLSVMVLIMTGGTGLIMWMAELIT DKGIGQGMSILIFMSICSGFLPQLWEIGWGTNGTNGDWLKFGIVTGVLVVILVFVDFVEL SQRRIPVQYTRRMIGRKMYGGSSTYLPLKINMSGVIPPIFASSILAIPTLIAQFGKSGQS WVDWINKNLANTTSVWYIALYALMIVFFCFFYTSITFNPDETADNMKEYGGFIPGIRAGN ATSRYLNYVMNRLNTVGAVYLLFVALIPTVLIMALNLNSKLPFGGTTILIIAGVGLDTLR QAKAQTEQFQYTGFLLEGIDHKEG >gi|197324944|gb|DS990230.1| GENE 283 318119 - 318682 1003 187 aa, chain + ## HITS:1 COG:XF0275 KEGG:ns NR:ns ## COG: XF0275 COG0563 # Protein_GI_number: 15836880 # Func_class: F Nucleotide transport and metabolism # Function: Adenylate kinase and related kinases # Organism: Xylella fastidiosa 9a5c # 1 185 12 196 198 171 49.0 7e-43 MRLLIMGPQGVGKGTQAALLAEHYGIPAISTGDIFRYNIKNKTELGLEALKYTDKGELVP DELTNKIVKDRLAMDDAKNGWILDGYPRNASQVKALDAMLEELGTPLDKVVALDADHDVL MQRIAKRAQEQGRSDDTPEAIAKRLATYAKETAPLLDTYKSRGQLVAIDGVGDIGAIQAN IVAALSD >gi|197324944|gb|DS990230.1| GENE 284 318794 - 319066 285 90 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|15900168|ref|NP_344772.1| translation initiation factor IF-1 [Streptococcus pneumoniae TIGR4] # 19 90 1 72 72 114 76 7e-24 MCLRTYKCNTPKEWTVRLMAKDGVIEVEGQVVEALPNAMFRVELENKHIVLATISGKMRK NYIRILPQDRVVLEMSPYDLNRGRITYRYK >gi|197324944|gb|DS990230.1| GENE 285 319090 - 319203 201 37 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|183601967|ref|ZP_02963336.1| hypothetical protein BIFLAC_06796 [Bifidobacterium animalis subsp. lactis HN019] # 1 37 1 37 37 82 100 4e-14 MKVSPSVKRICENCRVIRRHGRVMVICTNPRHKQRQG >gi|197324944|gb|DS990230.1| GENE 286 319336 - 319713 637 125 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|154486771|ref|ZP_02028178.1| hypothetical protein BIFADO_00596 [Bifidobacterium adolescentis L2-32] # 1 125 1 125 125 249 100 1e-64 MARLAGVDIPNEKRIEIALTYIFGVGRTRAKETLAATGINPDIRVKDLTDEQLITLRDYL EGNYKIEGDLRREIDADIRRKIQINCYQGQRHRKGLPVRGQRTKTNARTRKGPKRTVAGK KKATK >gi|197324944|gb|DS990230.1| GENE 287 319802 - 320200 669 132 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283734|ref|ZP_03647056.1| 30S ribosomal protein S11 [Bifidobacterium bifidum NCIMB 41171] # 1 132 1 132 132 262 100 2e-68 MAAPKQAARKPRRRDRKSIPVGQAHIKSTFNNTIISITDPSGAVVSWASGGDVGFKGSRK STPYAAGMAAESAARKAMEHGVKKVDVFVKGPGSGRETAIRSLQSAGLEVGSITDVTPQA HNGVRPPKRRRV >gi|197324944|gb|DS990230.1| GENE 288 320281 - 321276 1303 331 aa, chain + ## HITS:1 COG:MT3564 KEGG:ns NR:ns ## COG: MT3564 COG0202 # Protein_GI_number: 15843052 # Func_class: K Transcription # Function: DNA-directed RNA polymerase, alpha subunit/40 kD subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 322 1 322 347 460 74.0 1e-129 MLIAQRPTLTEESINPQRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVRISGAL HEFTTLPGVVEDVTEILLNIKGIVLTSEYDEPVVMYLRKSGNGEVTAGDITPPAGVTIAN PDQHIATLADDGELEIEFTVERGRGYVPAQMNKQDTDEIGRIPVDSIYSPVLKVSYKVEA TRVEQRTDFDKLILDVETKPAISPRDAVASAGSTLVELFGLCRELNVQAEGVEVGPAPVA EETNPEMAVPIEDLNLTQRSYNCLKREGIHTIGELVAHTEQDLLDIRNFGMKSIDEVKDK LQSMGLSLKSSPLGFDTNNLEGGTFFSPEDE >gi|197324944|gb|DS990230.1| GENE 289 321363 - 321875 735 170 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283736|ref|ZP_03647058.1| ribosomal protein L17 [Bifidobacterium bifidum NCIMB 41171] # 20 170 1 151 151 287 100 5e-76 MPTPKKGPRLASSPAHERLMLANMATSLFQHGRITTTLPKAKRLRPLAERLITFAKRGDL HSRRRVMRVIRNKSVVHVLFTQIAEQMEQREGGYTRIVKIAPRKGDSTPAAIIELVTEPV SPKKAVVKEAEAATKVAAATEAPVEETAAAEAPVEAPAETAAEETADKAE >gi|197324944|gb|DS990230.1| GENE 290 322275 - 327158 7540 1627 aa, chain - ## HITS:1 COG:VC0613 KEGG:ns NR:ns ## COG: VC0613 COG3525 # Protein_GI_number: 15640633 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Vibrio cholerae # 515 692 204 381 637 79 30.0 5e-14 MRLRRVKAAIGSVLAAVTLLSMSLTGVTAAQASDDNLALNQTVTASSYEVATTAPEKAVD GDLGTRWGTAQNKAANEWIEVGLGGTKTVKQINIDFERKDADQNITSFKVELKQGDTYTK VYQKDTRAKQQEIILLDQAQQASAVKVTVLSADGGTMNWVNVGINEISVYSAPKETVLDT ADTNHMLGATMTASSNETATLTPDKAIDQNRTGRNNRWASGYETPSNIWLKAEFPRLTAV KDIRIYFFERDVNPKPTNVQSFDLSYTDSEGTEHTLKSGYAMTASGTGYVADVVIQLDQA VNARSLKLSNFAIKSSEYNNVSVAEWEAYSNDQAEPGATLDSVVSDLESNHLTIETDTDT LALPTVPDGYTVKFNGADYEQLIAADGTVNHPLVDKTVQVAYVVTDTATGNTKTTSDIPY VVKGTNQQQEGNNAKPTIIPEIAEWHSTSAAKLAASAVTKVVYDDDSLKAVVDEFVADYK DFTGIKLTAKKGAAEAGAFNFVKTDSTAAIAQLGDEGYTMNIQADRVVAKSSSVTGNMYA MQTILQMTKQDASGFVIGSMRDYPRFTTRGLLLDVARKPVSLEMMREITRTMRYYKMNDF QAHLSDNYIFLENYGKRDNEDEAFKAYDAFRLESSLTNDKGESPTAEDYSISKKTFKQFI QDERALGMNVVPEIDVPAHANSFTKIWPELMVKGRVSPINSNRPLIDHLDVSKPETIAKI KEIFDDYTKGDDPTFDSDTTVHIGADEFLYNYTAYRKFINEIVPYIKDTNTVRMWGGLTW INDHKTEITKDAIENVEMNLWSKDWADGLQMYNMGYKLINTIDDYGYMVPNGSYGRANAY GDLLNISRVFDSFEPNKVRSSGGYQAVPSGDDQMLGAAFAIWSDNIDKSASGLTESDLYW RFFDAMPFYAEKTWAATGKEKGTAAKLTALAAKQGTGPRTNPYYQATSKNSVYESYDFND GLADASGNGRDLTIGDGSKAAVKDQSLKLAGGSSYATSKLDKLGNGNELTFDVTLQQAAK PGDILFEADAPYGTHDIRVMENGKLGFTRELYNYYFDYELPVGKTVTVTIKVDQQTTKLY VDGEFVSDATGKYIDKGIEKKTGITAATFALPLQRIGSKTSAINGVIDNVIVKKSEAETD QYNKSCWTGTTNSETQYNDTEGLLRYAFDNNPSTIWHSNWKGATDKLTGSNSFYAEIDMC QKYTINQFSFTPRTSQDSGQVTKADLYVKANANDEWKQVATDQVFEASRAKKTFMFDEQE VRYVKFVAKSSNDGWVAVSEFGVANKPSSTVRVFVAADPAEGGTVSVAAEGETGTDTAVD VASGASVTAKAVAADGYRFSGWFTTASETAVSTDATYTFAADGNTALTAKFTKDSTPDPG PKPTISSIAVTKPTVTDYKVGDTFDATGLAVTATMSDGSTKTLTAGEYTLSATQDGAAVA LDKAFAKAGKVTVTVTANGKTATFDVTVTAKDPDPEPATLKSIKVTSKPDKTTYTVDETF AKTGLAVTGTWSDGKTALLKDGEYKLSAVDADGKTVDLTKPFTAAGDVTVTVTSGKLTDS FTITVKAKTVTPTPGDNKPGENKPGADKPKPNTPDEVAKTGASVTAVVFSALLLLSAGYL LVRKRRI >gi|197324944|gb|DS990230.1| GENE 291 327149 - 327394 64 81 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MPGQCAISSRPPVYRRRAESPPPPRDTHVPIHCGQMLDVTVNFVYIGAKSQRMRRCANQS TKIPTITETTLTTYPMERLCD >gi|197324944|gb|DS990230.1| GENE 292 327370 - 328272 1187 300 aa, chain + ## HITS:1 COG:MT3562 KEGG:ns NR:ns ## COG: MT3562 COG0101 # Protein_GI_number: 15843050 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 1 299 22 296 297 194 41.0 2e-49 MRLRIDLAYDGGGFFGWAKQPTIRTVQGEIERVLHTITRVPVDDPAEPLRLTVAGRTDTG VHASHQVCHLDIGEETLSRCVGHMSVPPTVALKHRLQRMLPADITIHDVTVAPSGFDARF SALERTYVYRVADRASEVDPRLRGFVLHLDADLDVAAMNEAAAMTIGLHDFGSFATPNPG GTTIREVKTAYWRRIPTRPLVVDGVGERYRTPAAESDLLCFTIVADAFARNMVRSLVGGC IQVGMGKRSTDWFREKMAVPLREGSTGPIAPQGLTLEHVAYPADDELAERAERIRAKRTL >gi|197324944|gb|DS990230.1| GENE 293 328458 - 330641 2921 727 aa, chain + ## HITS:1 COG:sll0335 KEGG:ns NR:ns ## COG: sll0335 COG2308 # Protein_GI_number: 16331295 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Synechocystis # 28 453 56 480 481 375 45.0 1e-103 MTERSARQFAEELVNRRGDINRELSRNGVRFGVYKNGEYHDRLFPYDPIPRIIESDEFDE LEAGLKQRVNALNAYLKDIYSDKRIIHDGVIPEEYVYTSAGYFPQVNGVTPPGGIFAHIA GEDLVQGEDGRWWVLEDNLRIPSGASYPLFARDIERRTNPKLFRDVHVRDNRDYPRLLRK AMDFVSTEGIAVVLTPGRYNSAFFEHAYLAEKTGAALAFPEDLEVVDNKLYFLDYAGNRH RVGAVYRRLSDEYLDPFAFNPDSVIGVPGLLSAYRSGNVAIINAPGNGAADDKAIYYFVP QMVRYYLNEEPILHNAPTYMPMFEKDRKEVLDRMGELVIKDVAEAGGYGVVFGSSLDKAA REDLADRIKEDPRRFIAQEVIQFRDIDVIDPDSGEVSPRKCDLRAFVVTGQNAHVWYSGL TRYSSVPGQMIVNSSQGGGFKDTWVLAPEDGSTDRQREESVASVNLIPHSKRHSLSLVTA SKADNLYWLGRYTERAFTTLVQFFPFYDRVMDTDVDAFRPFAKALDLPQDFEDFDGFIHS FLYDGTNPDSVRSAIVAAFNNAVVLRPELTSRLLQYVELAVKNITEAAERSASADDIYSQ RDIADDMLAFWGGIENSTADITLKAFVFIGKYIERIDLYTRFHLDNSELDAPLAKLETYS RTLDGMPLPSCFVSGISWLLGQLPSRGYPELTSRLNEFLTDFNSRAITGDPKDAGMLNAM NMDAKRP >gi|197324944|gb|DS990230.1| GENE 294 330763 - 331563 1022 266 aa, chain + ## HITS:1 COG:CC1600 KEGG:ns NR:ns ## COG: CC1600 COG1305 # Protein_GI_number: 16125847 # Func_class: E Amino acid transport and metabolism # Function: Transglutaminase-like enzymes, putative cysteine proteases # Organism: Caulobacter vibrioides # 14 248 13 270 325 112 28.0 7e-25 MKKLVFDYEMKLTFSSPVTDHRFQLRCVPATGPRQQVVDVEVAIEPDVELETTIDSFDSV VMTGFIPQPHTIFSYSVKGIAFVDNAHIKSEIYKPLYRFNSALTIPGPCIEAMIAACRAR IAGLPADATPIDQAWEVMDEVYQAFTYTPASTTIRTTAEQALAQRKGVCQDYAHVMLSVC RHVGLTARYIAGLLGGEGATHAWVEIYHDGRWIGLDPTHNRMVDDNYITIAHGRDYRDCM LDIGIFSGYQVQQNQWVNASVHEQLL >gi|197324944|gb|DS990230.1| GENE 295 332075 - 332272 228 65 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1525 NR:ns ## KEGG: BBPR_1525 # Name: not_defined # Def: transposase # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 65 179 243 243 136 100.0 3e-31 MLRACEWVCYMKTAHPRPESFIPDDPLEDGKATSPEPEGDASPAYGIGIDWNEFHTGTRY PNGTD >gi|197324944|gb|DS990230.1| GENE 296 333171 - 334145 841 324 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1471 NR:ns ## KEGG: BBIF_1471 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 324 1 324 324 558 99.0 1e-157 MQTRHWPDHGIPCRERNISSWCRRIVAALCITALCGALSACSAPRIDGRAESEHQPSACE SAYWAADASTATMNGRHHIIMRYLAAKQAVGQWSEVAATCTQRFAQGTIRSAQAEHVAVT LGTRLGGNDTYRTVSDDSLRQVLGIDLDGATLGAMSLAEDRAGFVMEVLAARDTPGATLS RSDRHKTAGQLLFTASGLSRDPREKVYDIQKILASPTSMTDSTTGLSVPTTALTEIDCAR EQLAAMADDGASAKSKHTDKTGNNTNGNGDTDSATDTTDVNATDTNTVGTENDARLRVLS TLISSHITSAFALGYPDMDAFLFS >gi|197324944|gb|DS990230.1| GENE 297 334220 - 335248 552 342 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|17988250|ref|NP_540884.1| transcription elongation factor NusA [Brucella melitensis 16M] # 11 338 17 357 537 217 38 8e-55 MELDLAGMHQLAIEQGIDLEQLDAALEEALRLAYLKTPHAAKHARVELDTRAGTFTVWAR KEIPVEPTEDDPHPAPELGEEYDDTPRNFGRLAAATARQVIGQLFRKAEDDKVFGAFSGQ KGKLVTGIVQQDASDPTNVHVAIGDVEAILPRREQVPGERYRHGERLRVYVVNVARGVKG PEIVVSRSHPELVRRLFEREVPELVSGAVSIMAIAREAGARTKIAVRANTDGVNPKGALI GPGGARVRAVMENLGPEKIDIVDWSADPAKFVASALSPAVATGVQVISEKNKTAIAFIHD DQLSLAIGKEGQNARLAAKLTGWKIGIESTEAHAKKVAAEGK >gi|197324944|gb|DS990230.1| GENE 298 335458 - 338424 3136 988 aa, chain + ## HITS:1 COG:ML1556 KEGG:ns NR:ns ## COG: ML1556 COG0532 # Protein_GI_number: 15827818 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Translation initiation factor 2 (IF-2; GTPase) # Organism: Mycobacterium leprae # 2 987 3 923 924 747 51.0 0 MAKKRVYELAKDFGVDSKTVLDKLKDMGEFVKSASSTVEAPVARKLKNAFQKGEAKPGAS AAERKTPAPAPSEHRAPAVKPAPVAKPGLGKKPAAAPRPAEPRSAAPAAHVPSSNRGTTP RDNRNESRGDMRDARPNREGGENRPSPAQRHNPHAPSGQRGAFPGPRSHQPGHGGNAGGR PQDSRGGSHQGQPRQGQQPGAGSAPSANGGARPSTPGPRPGNNPFSRKQGMHAPTPRDIP RPHPMARPTVNGNHNDNRGGRGGRPGAGQGGRGGFRGGRPGQGAQGAKPGQWGHNRPGQT GGARPAGGNRFGAGAGTGAGQGGGFQNNSNTSGTGPSRGGGRGRGGAAGAFGRQGGKSSK ARKNRLAKRQEFQEMKAPVIGGVRIPTGNGQTVRLRQGASLADLAEKINVNPAALVTVLF HLGEMATATQSLDESTFQILGEEIGWNIQIVSAEEEDKELLQQFDIDLDSEELQEDEDLK PRPPVVTVMGHVDHGKTRLLDTIRKTNVIAREAGGITQRIGAYQVTVDLEGEKRKITFLD TPGHEAFTAMRARGAELTDVAILVVAADDGVMPQTVEAINHAQAAKVPIVVAVNKIDKPG ANPEKVRGQLTEFGLVPEEYGGDTMFVDISAKQGTNVDKLLEAVLLTADADLDLRANPDM DARGATVEARLDKGRGAVATVLVQQGTLRIGDAIVAGTSYGRVRAMLDENGNHMKEATPS TPVQVLGLTSVPTAGDLFLVASDDRTARQIAEKRQATERAAQLAKRRKIVSLESLKEQFA KSEVDMLNIVIKGDSSGSVEALEDSLMKIEVSDEVGIQVIHRGVGAITQNDVNLATVDKA VIIGFNVRPNRQVADLADREGVEIKYYSIIYKAIEDIEAALKGMLKPEYEEVVTSHSEIR EIFRSSKFGNIAGVMVQDGEVKRGTKCRILRNGVATVNDLEISSLRRFKDDVQSVKEGYE AGINLGTFNDIELGDIIETFEMQEVERK >gi|197324944|gb|DS990230.1| GENE 299 338726 - 339310 837 194 aa, chain + ## HITS:1 COG:Cgl1938 KEGG:ns NR:ns ## COG: Cgl1938 COG0858 # Protein_GI_number: 19553188 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Ribosome-binding factor A # Organism: Corynebacterium glutamicum # 5 150 4 149 149 107 46.0 1e-23 MAGTNPRAARVAALIQRVIASSMEAQLHDKRLASVTITDVRVTNDLQIAKVYWTQLGHDG REQGERKRAKQALDQAKGRLRSLVGSKAGLRLTPQLQFIYDEVPSEAHEIEDILAVAHKR DEEIAKARETAQYAGDADPYKHPEERDDDEFDDDDEYDEYADDLDDDDVEGNGIGVETLE DDAENAADEATGDR >gi|197324944|gb|DS990230.1| GENE 300 339353 - 340645 1010 430 aa, chain + ## HITS:1 COG:Cgl1933 KEGG:ns NR:ns ## COG: Cgl1933 COG0130 # Protein_GI_number: 19553183 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Pseudouridine synthase # Organism: Corynebacterium glutamicum # 28 430 3 292 297 157 35.0 4e-38 MGTVPEASGGEQAPIVATQAAPVAGSAAPATPTSGLLVVDKPRGVTSHDIVAAARGALHM KKVGHAGTLDPMATGVLVVGFGNATRLLNHIVEHDKTYEATIRLGQSTTTDDADGELLSA TSPERWQELLALPVAGGPQSAGENGPVNAAKGSAVAAAKVADDGSAYHPHQEAFLPDGQQ LWRDRIDDIIALQLTGSIEQVPNTFSAIKINGQRAYDLARDGKDVQLKARRITVSAFGVL DVRFGYAPTRQLGLPLVSAADGRATTERDDAEATPVIDVDVRVSCSAGTYIRALGRDLGA ALGVGGHLIRLRRTRVGGFDVSSPNVITAHVETREYTDRNGNHQSRNRAVLDVIGDELAG KALTMLDAARGTMPLLAITDQDAVNLRYGRRIPYDIHGTAAAYLPQSGEVVALVERAKRG EAKPATVFGA >gi|197324944|gb|DS990230.1| GENE 301 340925 - 342184 1274 419 aa, chain + ## HITS:1 COG:Cgl1932 KEGG:ns NR:ns ## COG: Cgl1932 COG0196 # Protein_GI_number: 19553182 # Func_class: H Coenzyme transport and metabolism # Function: FAD synthase # Organism: Corynebacterium glutamicum # 25 415 17 325 341 146 31.0 7e-35 MKITILAPDASGLVEWPTLSANRKSVVTVGVFDGMHRGHQAVIRRAVELAKADKAFSVVV MFDPRPGVVHAYAAAHDGQEPGDGFRDSMALTSVDQRLRTLENLGVDHVLIVRYTLAFAT KSYRFFLGQMVGKLGMRTLVLGTDAAMGANRAGDVKAIGVLAQATGVFELEIVDDRGPGH VRVPADVTPQMPSEPGEPVDPTEGMTKAQLRAWSKKHQGREVRVWSSTNVRYLLAHGRIK AADEILGHAHAIEGTVVHGEERGRTIGFPTANLGSMIDGYIPVDGVYAGWLIDLGAAGAT AGSDENASDDNSGSGNASVIPRVYDSGSSKARLAAESPYRWPAAISIGTKPTFNEETGLN ERVVEAYAVTDEWLDLYGHDVRVEFAGFLRPQVKFDSADALKDELTRNVQETRELTSAR >gi|197324944|gb|DS990230.1| GENE 302 342326 - 343726 1552 466 aa, chain - ## HITS:1 COG:BS_sms KEGG:ns NR:ns ## COG: BS_sms COG1066 # Protein_GI_number: 16077155 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted ATP-dependent serine protease # Organism: Bacillus subtilis # 1 464 1 457 458 363 42.0 1e-100 MVKSATRYVCSECGWDGLKWVGRCPQCGQWGTVEEFHEARPAASSSRTAAPGRTSRTQAA ASIVSAATPITQIDTSTASRLSTGFGEFDRVLGGGIVPGSVVLIAGEPGIGKSTLLLETA GNIAAGQPNGSVLYVSGEESQAQVRLRASRVNAMEQNLLLASTTDLATVLGLIERTRPTL AIVDSAQTIVSQDVDGISGGSTQVREVASALIDTAKTLNIPVLLVGHVTKDGSIAGPRTL EHLVDVVCQFEGDPETALRMLRAVKNRFGPTDEVGCFDMSGEGIEEVSDPSGLFLSSADE RVEGTCVTFTLDGHRSLPIEIQALVTSSVLPTPRRAVVGVETNRIAMLTAVLYRHGKVNL LANDLYVSTIAGGLAKEPACDLAIVAALASAARSKPIARDTCAIGEISLTGQIRPVPRLE HRLREAARLGFATAVVPPMRKRVTIEGLRIVEVTHLRDALESLGVV >gi|197324944|gb|DS990230.1| GENE 303 343812 - 344441 824 209 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1464 NR:ns ## KEGG: BBIF_1464 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 209 1 209 209 326 99.0 4e-88 MAKTQSPSYPHGSSASRGKLIVVMIVAALVVVLALLSAFVWPGWALNKTDEVTKVQQQTA AEPTKPSIKATALPDDASELLKAMPDSVLNYARTKAGASETWKSASPLEEYTLTYSTGKS AKDVTVIVAQWSDSDTVKKQYDELAKNLTGKELKSGDVKVSGKSTGSYTVRADSKDGKTA TALWQNDTAVFEVTGSKESVLRFYEPFPL >gi|197324944|gb|DS990230.1| GENE 304 344566 - 344655 165 29 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGSVIKKRRKRMSKKKHRKMLRKTRHQRK >gi|197324944|gb|DS990230.1| GENE 305 344823 - 345521 1215 232 aa, chain - ## HITS:1 COG:L0045 KEGG:ns NR:ns ## COG: L0045 COG0120 # Protein_GI_number: 15674215 # Func_class: G Carbohydrate transport and metabolism # Function: Ribose 5-phosphate isomerase # Organism: Lactococcus lactis # 7 227 2 222 224 239 54.0 4e-63 MDKAQQDALKKAAGIEAAKLIENGMIAGLGTGSTVRFLVDELGRRVKEEGLQFTGVTTSR RTQEQAEGYGIKIVDIDDVDHIDITIDGADEVDKNFNGIKGGGAALLWEKIVATNSNKIV WIVDESKVVDTIGKFPLPVEVIPFGAGHVIKQFEAKNYKPVLRLDADGKEVRTDENNFVV DLHLERIDHPQDLAEDLINTVGVVEHGLFLNMVDKVIVGDPNGPRVMTNGNK >gi|197324944|gb|DS990230.1| GENE 306 345671 - 346750 974 359 aa, chain - ## HITS:1 COG:NMB1618 KEGG:ns NR:ns ## COG: NMB1618 COG0328 # Protein_GI_number: 15677468 # Func_class: L Replication, recombination and repair # Function: Ribonuclease HI # Organism: Neisseria meningitidis MC58 # 2 147 4 137 145 101 43.0 2e-21 MTITVSTDGSALGNPNGPMGWAWADHELNMAHSGGHEHGGDCDAGGATNGTNQIGELCAV LEALRAHPGAEPLVIETDSQYAINCSTKWVHGWKKNGWKNSQKKPVKNAALIRAIDAELS RRAGSVKFVWVKGHAGNAGNEKVDDLARTYAGDCRSGVQEGYLPKEGWQSLLASEYAKGT DVPEDAQMLLDGRISTQEYHLGRGGESGEAGAEHESDGDNVAKRIRKPSLAELLAEPEGV PDYGETQSDTSSTTAMSAPTVPMTTESDATVALSSNSAQAEDTQSGSSTRSVAEPAAPRL SPTALTASGTLRFTPPPSTSPTYDGRPRIIHGLVRVDGYVNGDGTITLDNAAFYTDKQG >gi|197324944|gb|DS990230.1| GENE 307 346981 - 352863 9501 1960 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1514 NR:ns ## KEGG: BBPR_1514 # Name: not_defined # Def: hyaluronidase (EC:3.2.1.35) # Organism: B.bifidum_PRL2010 # Pathway: Metabolic pathways [PATH:bbp01100] # 1 1960 1 1960 1960 3348 99.0 0 MRSKALGGLLAAALSLSPAVAIGVQTAYAAGGDTAATEYTLYPKPHSIRYDSGQYILRDI NVIYDDDIDEATQDRLDEVAALKNLNVTESDAAVSGKTNVYVGVNGSDGKAETAIESKYS PDSAIFDKTDSYFLKSDNGTISVLGKDTDASFYGLTTLYQVLGQIDSLTIRNFTVTDYAD VVSRGFIEGYYGNPWSTQDRINLMKWGGYYKLNSYFYAPKDDPKHNSQWRTLYTQDELDT KIKPLADAGNASKTRFVFALHPFMNNAIRFNSEANYQADLKVLQDKFAQTIGVGVRQIAI LADDAANVGGNNYTKLLTDMVAWLKEMKKTYPDLKTTLPFVTQEYMGNGMSYFANFPKEV QIVMTGGRVWGEVSQNFTDTFTSNVGRGPYMWINWPCSDNSKSHLIMGGYDTFLHPGVDP SKIQGIVLNPMQQSEPSKVGIFGNATYSWNIWRSKSEADQAWQDSFSFVDHNSAVPTAAS NALRELSKHTINQNMDSRVTALQESVDLAPALTAAKAKLADGTITAHDLTDIKAAFVTLQ KAAKTYRAKGDAKMLGDIGKDYTGQDANEQIAPWIDCWDDTTKAALAYIAGIEAALNGDT SSTLKEYSDAQSAFAASKKHGFYYVNHTEYAEVGVQHIVPFIKAMDSYLSNKVQQEADPN VVTKTYISDVFTTPTSGSIEDIFDGKDSTVTVFQNPNYLHKGNYVGVKFSKATTLKSIRF AFNGGKNHFYHSKLQTTTDGENWTDVPDATFERPKGSEEPIKVTGLNITGVTGVRLIATA DNGDDLWLGIKGIDVNKVEKETLAPYTATGVQLENLNATYSSTKEQMIDGNPSTITYLKD PNGDKIAAGAAVIVDLGSSKPIGEVTITGHASSPDDRPSQGVVEVSDDKATWTKLGDLSD DVTSTVSGNVTGRYVRIRNTAAKNVWWRVAEITVTPPETADPLKSVYTNKTQHGYTATLG ANTAELFDKSHTMLDGGQYAGLDLLAIRDLTDVELNTGNANPSLQISDNGLVWTTVEPGN LTGKTARYVRVINDTDGAAFSVDKLKVGFSTVGKFGKLVSSDIQKRTDWGTDTRESGNAF DGDMTTVIKFAGQPRQGNTAVFDLGQPIDITSLRIYTQDTQYDYIRDTKVQMSVDGKTWV DAFEIGDGVSDTDTTTAFGDISDTNKKTDSNYPNVFYYGKDDIANGTGMRYLRLLTTADY PQRALAFNEFMVNQGAYVSTEANAAFSATKVEERGHAPSNMIDGDLTTTYKPSAANGSLT YKIDDPSDIKSFRIVQSGAASGATVTGTVYDAATGTTSGVTARTAARSTSEVTFGTLEQA INEFKVPDGKQLLSVKIAWGDAIPEISEFITLDSADTDADITTAKAALKAKIDATVDTSA WTANAKTAYDEAKATAQAVYGSPLVGKASIDAAASAVQSAIDAAQTKADAAAVAALRKLV DEAVTNDGHFYTTVTFTAYTDALDEVKEALKDTNNLSTADAASLKKAVDDALAALKDSTY QRELATIAVDSFATIDEADYTTNSYAAFKAAKEALDALIAADGTKPAAFKTKTADYTTAK TALVNVAALKAQIAHESNYVEANYTADSWKAYSDALKAAKAKLVNGTTDSVAAALTALTA AENALVRTTTPPDTTVLDETVADMEKVNGSEYTTDSYKALTDAIAKAKSDKVKGDAGLNQ QNIDAMKAAKEALVSTVELKAKVAEAGKVDSSKYTTASYGVLSKLLAAKDDTTSDPVVKG LDTLYKSGTVKELAERVAAIDAAVAKLDARATGVKDYVDGIKLKDNDKGYYTDASYKAYS DAYKALKKLAAAGEGEVGIAEFTEAKEAFEAAEAKLAYKSADYGKIDDLLAKVPSDLSGY TADSVAKFEAAKKAVKRGLTIDQQSKVDAMADALEAAIKGLTLKSQAPGGNKGDGTQSGT HKGDDISKTGADVQVFAIIIALATCAGLGAMAYARRRREA >gi|197324944|gb|DS990230.1| GENE 308 352796 - 354400 421 534 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163788782|ref|ZP_02183227.1| 30S ribosomal protein S1 [Flavobacteriales bacterium ALC-1] # 16 474 5 449 458 166 25 1e-39 MTSTSSTDVPSAISADALIIGFGKGGKTLAAKLASTGRTVIVAEASADMYGGTCINIGCL PSKSLILSADRARREGANRTAETREAAFEAAIREKRRITAMLRDRNYHKLADQDNITVIT GRARFTGAHSAEITTADGPVAVAADMMFINTGATPHIPDIPGIRTTPGVYTSTGLMDVDE LPQRLVIIGAGFIGLEFASMFADFGTAVTVLQHSDEFLPREDEDVAAAIRAQLESQGVRF LFGADTKAITSADDGIRLSVSMRGTSDVGSEARLCLSTDAVLVATGRTPNVEGLNLEAAG VELTERGAVKVDDLLRTTADGIWALGDVNGGPQHTYISLDDYRVVWSQLNGSARPYTLSD RRNVPSSTFLHTPYSRVGLNEREAKAAGLDYVVKRLPVATVPKAQVMRRPEGMMKALVEN GTDRILGAMLLAAESHEVINIVKLAMDMGAPASTLRDMMFTHPTMAEALNDLFAQRSRIA LVRDTFAQRPTNRGSPPWIGGEPLGLSASQPAVTPRGGDGRRPWRPGQHTWRAR >gi|197324944|gb|DS990230.1| GENE 309 354781 - 356457 2560 558 aa, chain - ## HITS:1 COG:sll0726 KEGG:ns NR:ns ## COG: sll0726 COG0033 # Protein_GI_number: 16332219 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglucomutase # Organism: Synechocystis # 12 557 30 567 567 612 58.0 1e-175 MVANNAGKPATPADLINVDEVIGKYYDLVPDPAVPEQRVIFGTSGHRGSSLKTSFNEAHI VAITQAIAEYRKKAGVTGPLYLGRDTHALSGPAEKTAIEVLVANGVHVRVDSRGDFVPTP VVSQAILTHNRAADGTQRFEGEGLADGIVVTPSHNPPTDGGFKYDPVTGGPAPAETTNAI AARANELLGDFKSIKRVPYEEAIKSEYVEGFDFREHYVADLGNVIDFDVIRDSGVRLGID PLGGASVNYWPLINEKYGLNIGVVRPEVDPTWRFMTIDHDGKIRMDPSSPYAMKGLVDQL NAGAWDKYDLVGGTDPDADRHGIVCPNWGVMNPNHYIAVCVEYLFGGNRPGWPEGTGIGK TLVSSSLIDRVASSINAKLVEVPVGFKWFVDPLFSGEVAFGGEESSGMSFLRRDGRVWTT DKDGLIPDLLAAEITAKTGKNPAQLHQDQVARFGESWYKRVDTPTTLEQKAKFAKLTGDD VAATQLAGEDITAKLTEAPGNHAKIGGLKVTTKDNWFAARPSGTENIYKVYAESFVSPEA LDKVLDEAKLVVDKALGE >gi|197324944|gb|DS990230.1| GENE 310 356462 - 356569 64 35 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MACAGSTPGNITNILEQKITISHKNVTQMTPVVAK >gi|197324944|gb|DS990230.1| GENE 311 357230 - 357553 286 107 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1511 NR:ns ## KEGG: BBPR_1511 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 107 68 174 174 153 95.0 2e-36 MRLRTWWMPGTTTNAADGTVTFDQMPFDAAGTYEYTLVQVAGNADGVTYDSTEYAATITV TATADNTLTAAVSYAKDGETVDAATFANVYKAPTKPGEPTQPAEPVS >gi|197324944|gb|DS990230.1| GENE 312 357447 - 357686 191 79 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224283757|ref|ZP_03647079.1| ## NR: gi|224283757|ref|ZP_03647079.1| hypothetical protein BbifN4_07997 [Bifidobacterium bifidum NCIMB 41171] # 42 79 1 38 38 71 97.0 2e-11 MYSYVPAASNGIWSKVTVPSAAFVVVPGIHHVRSRKENVSDLRDTVGATAYGHVGDNNDA GILDRLSTSKYKNPAELST >gi|197324944|gb|DS990230.1| GENE 313 357794 - 358405 634 203 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1456 NR:ns ## KEGG: BBIF_1456 # Name: not_defined # Def: protease # Organism: B.bifidum # Pathway: not_defined # 1 189 1 189 192 296 98.0 4e-79 MPACKSGSTSGWTCGVVTADKVTESVNDNGELLDVYGFHFSAFLLSGDSGGAIVSGHYSI GVDSYGNMSSCDDAADDDAVAGGFAIVDGKYNAEAMFKHGFNLSINVGQPKFAKLAAGQI SGMVDAAAGAKVTVTVDGKSYVAIVGNAGAWTVRLPKALAPGSHKVTAVASLQSKGSDFT TTGAAASRKIGSGSSRMGAVMRP >gi|197324944|gb|DS990230.1| GENE 314 359001 - 361079 2729 692 aa, chain + ## HITS:1 COG:Cgl1324_2 KEGG:ns NR:ns ## COG: Cgl1324_2 COG1263 # Protein_GI_number: 19552574 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific # Organism: Corynebacterium glutamicum # 123 526 1 375 415 366 50.0 1e-101 MAASTASQIIEAIGGAGNVKSLTHCATRLRFELVDAGKVDQHRLETMKGVLGAVPQSGDR YQVVIGGAVATMYENIMHLPEMAGVGAGKGAVAGDKAQSDADVKAAERAKVRGKVAWMDS FFEYLSDSFRPILGVLLGASIIIALINLCISIGIVPGEEANTSLVFIKAIWKGVFYFLPI MIAYNASKKLKVDPWLGGSIMAALMTPQFADLMDSEKWKGVTTCVKSATLGTTSCSTKVF GIPMLLNDYSGNVFVPLLMAAVLALVYHGLKKIIPDSVQIVFVPFFSMIIVGALTAFLIG PLGILAGNWLGVGLAWLNGHAPFIFAILIPMLYPFLVPLGLHWPLNALMLMNIQSLGYDF IQGPMGVWNFACFGATAGVLFISIRDKNKDMRQTSLGALAAGLLGGVSEPSLYGIHLRYK LIYKRMLVGCFAGGVVIAVLGWLFPSVTAAGESVRGVTTNAFAFTSLLTIPVFSQMWVYA VSIAVSFIVSMVLIIMLDYRTPEQKAEMNAASESDGTAVETAPADAAPVATATATATATA VRTTTVGAPVAGHVVSLDDAGDPVFASRALGEGVGIQPTDSTVVAPVSGVLQTVAETGHA FGLKTDDGIEVLVHVGIDTVKMNGEGFHVAVSANQRVNAGDTLVTVDFDKVKEAGYSTTT LMTVLNTAALAGVTPKTGVDVQAGQEVLDIQR >gi|197324944|gb|DS990230.1| GENE 315 361130 - 361975 1095 281 aa, chain + ## HITS:1 COG:Cgl2781 KEGG:ns NR:ns ## COG: Cgl2781 COG3711 # Protein_GI_number: 19554031 # Func_class: K Transcription # Function: Transcriptional antiterminator # Organism: Corynebacterium glutamicum # 93 276 1 191 197 155 43.0 1e-37 MKILRVFNNNVVLAKDGAREVIVTGRGLGFQAKPGQRVDDAKIVRVFVPADGRDPDHIAE LLSEIPPEIIRLVTDAMTATGLAEQAESQPTLVMALADHITGAVQRAQRHVNIAYPLQAE VQSLYASEYAQASRLVNELNRHLNGVLPGSEAVALALHLVNAGFANGDLSDTYKMTGVIQ QMLTIIEQTYGVSLDQHSVNVGRFITHLRYLFVRIHQGKQLDKEPEPIIASIRQSYPKAM QCAQTIGTVASLRLGSNLTEDEVAYLALHVARVVADARKHE >gi|197324944|gb|DS990230.1| GENE 316 362057 - 363187 1338 376 aa, chain - ## HITS:1 COG:sll0036_2 KEGG:ns NR:ns ## COG: sll0036_2 COG1597 # Protein_GI_number: 16331996 # Func_class: I Lipid transport and metabolism; R General function prediction only # Function: Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase # Organism: Synechocystis # 94 342 60 289 309 91 30.0 3e-18 MPLAAIITIAVIAGVIVLIVAVTFALRARRHKRLSQQLVKRDDDQVHYVFVVNPSKPQAA QRRAHIEQFCRDKGLTDVEFIDTQLDKDGRACAKEALANGADVVVAVGGDGTVRTVASAM SGTGHAMGIIPIGTGNLFARNMGIPIDDIDAALTVATSHGSRHVDVGRLSLLDDPKADHG HAFLIIAGVGFDAAMIDDTDPQLKKNISWLAYFVGGVKNLFTPKYRGDVTITSTDGSMHT RHGVAFRTFMAGNCGQIPVFSLMPNASYDDGILDFEIIDTSGGIFGWANLFGDVVHQTIT GKPGSNPLSTNSTMDQIQGVSAEITLEKPVLAQVDGDMLGRTRHLRFTVDREALCVRVPE VAPDMSATGIIPPIRD >gi|197324944|gb|DS990230.1| GENE 317 363519 - 368312 7047 1597 aa, chain - ## HITS:1 COG:Cgl2538_1 KEGG:ns NR:ns ## COG: Cgl2538_1 COG2374 # Protein_GI_number: 19553788 # Func_class: R General function prediction only # Function: Predicted extracellular nuclease # Organism: Corynebacterium glutamicum # 45 875 37 815 816 453 39.0 1e-126 MRISTRIQSLLVSAALLVPLVATPVTAAYAQPTEEKTAASWSGVVINEAYLSGGSKGAAY KNKFIELYNTTDNDVTLDGTSLQYRPASGTGASNAAADLTGVIKAKGHYLIKAGSNGSDG AELPQADATATNLNASGTKGTLFLAATTSKLSPAVGDTTANADIIDALGYGDTNTFEKAA ATAPKSNADVKSLNRANGVDTNDNSADFTLSADITPEGTGEGSQPTPKPDPTPGDCPTGE AEIAQIQGTTDTSPCVGKTVTTTGVVTAAYPDGGFNGYTIQTPATGGAVNLAEHKASDGL FVYDSKNVKDLQIGDYVKVNGTISEYYGLTELNASSVTKLSDKVEAPKASTVAFPKTDTE RESLESMLIAPQGDYTVSDVYNTNKYGEIGLAASNKPFLNPTVKGLKGDAETGAAYQAEL DRIEAEGVYLDDGSSRNFLDTKYPDNADTPLPYLSNDQPVRVGEKVTFTKPVVLDYRNSA WRFQPTERLTGDNADAQPVTFTSTRTDTPDLAAVGGDIRLATFNVLNYFSTTADKTGCST SNAYTDRDGNPVTAKNCDVRGAWDKANMERQRAKIVKAINNLGADVVSLEEIENSAKAAS SVPASFKGERRDYALATLVDALNEQAGEGTWAYVPSPQTVPDLDVEDVIRTAFIYKPTKV ATVGATRILTDSDAFNGKNGYEHGRQPDAQAFKAKGAADSDAFLVVANHFKSKGSASNAL NQDPGDGSGNADYTRQAQADALLAFTDEVKSDLKLEKVFLVGDFNAYYAEKPIQKIVAAG YTDLSEQVSEKTGKYTYAYTVKDESGNTNGGVGSLDHIFANEAAMRSVTGADIWNINSVE SVALEYSRYNYNAKNLYQADQFRASDHDPVIIGISASGTTGGTATLNLLNFNDFHGRIDK NLTVPFAATIEQLRAEHPDSSLLLAAGDSIGASLFNSSAQKDQPTIDVLNALGLKASAVG NHEFDQGYDDLTGRVIGTDGKRNAQWDYLGANVYKKGTGTPALQEYSIQNVNGVRVGVIG VVTQETSTLVSPGGIKGIEFGDPVEAVNRVARQLTDGDESNGEADVIVAEYHEGAASNED DATAKPTIDEQKAASPVFKKIVDDTDPAVDVIFTAHTHMKYSYTDPAHNGRPVIQTGSYA ANIGQVVLDYDKATGTVTYRKSGNVAVDTSKSDDELAAAGDDTVRNVKSIVDAAVAKGQE EGDKPVGSIAADITTAFKDGARDDRASESTMGNLVADSLLDSLSSEDRGGAEIGVVNPGG LRAEFCKTGDNEKCTIAADGTITYAQANAVLPFLNNLWTTTLTGAQFKEALEQQWQTDAD GNVPSRPYLQLGLSHNVSYTYDPNAAQGNHITSVTVNGKPLDLKREYRIGSFSFLLQGGD NFRAFAAGKDTKDTGLVDRDAWIDYISKNSPLKPRYDRRAVAVTGIPADGKVTAGTSFDL QFSKLTLTSLGVPAETKLVATIDGTEVGSAAVKDGDTATLQVAVPAGLPAGAATLTVKAV TNGTTVTLPLTVATGTSTEPQPGKPGQTEQPGQTKPGTGDERHDGANNAAGNGGNAGAVE QLSQTGAPVVAVVVAMMALLAAGLTAVRTSKRADRIR >gi|197324944|gb|DS990230.1| GENE 318 368558 - 369844 1997 428 aa, chain + ## HITS:1 COG:Cgl2831 KEGG:ns NR:ns ## COG: Cgl2831 COG0172 # Protein_GI_number: 19554081 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Seryl-tRNA synthetase # Organism: Corynebacterium glutamicum # 1 425 11 429 432 488 59.0 1e-137 MLDIQFIREHADIVKESQRKRGESVELVDEVLRSDETRRSALKEFEEARAQQKEIGKKVA AAPADEKAALIAQTKELSAKVAEYKAAADAAAGEYTTAMWKLSNVVEPEAPEGGEDDYVV VKKVGQPRDFAAEGFEPKDHLTLGTGVAGIDMRRGVKVGGSRFYFLRGAVARMQIAMLTM AVDQAEKHGFVLAITPTLVRPEVMAGTGFLNSHADEIYRLREPDEQYLVGTSEVALAGMH ENEILDLSNGPLRYCGWSSCYRREAGAAGKDTSGIIRVHQFDKVEMFVYTKQEDSYKEHQ HLLSMEEEMLAKVEVPYRVIDTAAGDLGSSAARKFDTEAWIPTQGRYRELTSTSNCTEYQ ARRLNIRERNEDGSTRAVSTLNGTLATTRWLVAILENHQQKDGSIEIPQAMRPYMGGKEV IEPTKWEA >gi|197324944|gb|DS990230.1| GENE 319 370108 - 370356 87 82 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MARPRHTAPRRFQPPPYHTMRFLAVFVLVWYSADSRQFGRIPQIIGKWRFLNFCSLPYQL KNASRSHCVANAVPHNAILTTN >gi|197324944|gb|DS990230.1| GENE 320 370447 - 376320 7856 1957 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1503 NR:ns ## KEGG: BBPR_1503 # Name: not_defined # Def: beta-N-hexosaminidase (EC:3.2.1.50) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 35 1957 1 1923 1923 3370 99.0 0 MMVSSARHRRGHSPEHPPTCPRSWRRRATALLVAMATLMCGLITSGRLARAVEPAIAGVT ARGAAADGHAAAAAVDGDPATYWQSPADSSMQDYRRFLDFDLHGAYSISQIDITNLAGSY YHYEVYLSKDGADYGKVAYKSDDAPATGAADTHPIDAAEAAYARISVSYNSAAQQVNLAE VAFHGTKVSDEQASPKAISVTDFDSSSWGREWARVETDSDYAAEKTVTEVRNLVGRVIGE RWVDKFDFQLRGKADGKDVFEISDAGDGRISIRGNNGVSLASGLNYYLRHWCKVDYNPLF GSQLSMPESLPAVGRKILKYTNYEYRYALNFCTYSYTMAFWNWDDYEPFLDWAAMNGVNL MLDIVGQEEVLRETLTQYGYSDDEVREYLSGPGYYAWFYMQNLYSVGGPLPAAWFEQRVE LGRRIHDRMQAYGITPVIQGFGGQVPADFQEKNPTSVAASSGTWSGFDRPYMIKTYLTDA DKAAGKEDYFQKVGDTFYKAQESVFGKVSNYYAVDPFHEGGMVPDGFDIVDIYRTVQRKM LDHDPAAVWVMQQWQWGIDETKLSGLADKGQALVLDLQSDLRSQASAMENQGVPWVWNML HNFGGRMGLDGVPEVISQDITKAYNSSGYMRGIGITPEAIDNSPIVYELLFDMTWEQDPV DYRSWTQEYAERRYGGTDGTIEKAWDILLDTAYKHTDGEYYQGASESIINARPSDNTIGS ASTWGHSDIDYDKRQFEKAAALFEQAYDSYKDSAGFRYDYVDVMRQVLANSFQEYQPLAG QAYKSGDLETFRTLSSRMLDIIKAQDKLLSSSDDFLVGAWIDDARTMLDGADDWTADLFE LNARALVTTWGLNKNGSLIDYSNRQWAGLTGDYYYRRWKTYVDNRLNKLEHGTDFTDPDW FDYGWQWANRKSDEDGYGFATEAADDVDQKALGKIILDQYSVTAMDDVTDGGTAVERTNL ALGHDVTDEDTGTVVPDVTDGNTDTGWTQTGKTDATLVVDLDGTYSITGAGITLQQIAAD FPLRYEIDVWNGSGWVEIGRSEADAVSSKNEVAADILGSKVRWKLHSTNGRDLTGIYELS VWGAAQPQPEYTNLALGGAASAGPSERPASNGNDGDDGTLWVGNGSDPNWYRIDLASAQR VDRVRLVFETAGRLFQFRVVAGLADGTERTLIDETQNQGALDQVYAANLGEEVEHVTVEF TGSVGGTAWPALAELELLQEAGDTIESVNIATSAAITSSPTKDAPENAGALVDGKATAWV SRDGATPAWFQLDYAKAREVDSIRLKFEEGQPDRSMQFTLKVIDANGDEHTVAERTEADL SKQQGIVMDVPVGMSITRIRMDIADARIPSSGSPAWPLVSEIEVYATPGNVARDAKTTAS DGSTLTAADLAKLTDGDRDSAATLTATADKTLTFTLAKAADINMLGLLASGNSEPVRFKA EYRVVPQDGGGAGDGAADQWKTLTDYSGNAQMKPEIVARLARPVYTDAVRITVLNENPVA INELYLYQADAGASLESYLSSVETALGKLTVGEYAGNVTRAAKTKLEVVLERARAALDAG LTSREAGRWTTTVEDAVSEFYRTGYVSLDRNALYVAIDDAAALIASLDAHGLPASSAALA EARASAKQVSDAYGTVTQQDLDDAAAALRRSADTALAQLDAQERYQVVLDAAVKTLEDAQ TAGSVGEYEGQHPQSAADALRQAIDDAKAAHGAAAGDADKVDAAADALRQATTAFNESIV HIDAAALDAAKRAANGLVESQYDRAAWATMREALAAAVATDMAHISQSDVDALAARLNDA IAALSDARLDRGPLSDAIASAQALREGDYTAESWKAFAEALAAAQEECGRRSTTQGDLDK AVKALTQARDGLERKQPGGGEEPGGGEDPEQPGSGGQPERPGGVKPGAGGNADTSKPGTA GTETLSKTGAQTLLLAVTACIMLAAGFSITTARSRRR >gi|197324944|gb|DS990230.1| GENE 321 376540 - 377040 503 166 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1449 NR:ns ## KEGG: BBIF_1449 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 13 166 1 154 154 196 98.0 4e-49 MNPPEARSEGCIMFRENRRFVVRFRQRLSISSSKYTGDAAAANAVHKAQSPVMRVGDEAP LTAAKAGSAAPAANIALAATLDIANGVDVILTGEVDGHMIDSMADAKPVLKTSTPDAPNT PEPSEVPVKSETYAAVTSVATALGETRLPGTSPMMTRARRESHIGG >gi|197324944|gb|DS990230.1| GENE 322 377184 - 377708 491 174 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1448 NR:ns ## KEGG: BBIF_1448 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 174 1 174 174 293 97.0 2e-78 MKDREFDDDEIDYLRSLPAVNSVGRNRIRYTGQFHEYCMQRYRAGDSPTGIFRDVGLDPS LIGYKRIERCIARWKMMEPADDDAEPISADKFPRTGNPLIPPAPIRAATIRENFGGSEAK DLRDMLIAQQIRYIHELTAENDRLRERNRRLESGLREDEGETGEQSGETDQPTL >gi|197324944|gb|DS990230.1| GENE 323 377797 - 377961 175 54 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRVHLMAHSSQKEPCNASYRGILARREPLRDHPQSLRDSPPGPAIKDGLAAASL >gi|197324944|gb|DS990230.1| GENE 324 377945 - 379531 1900 528 aa, chain + ## HITS:1 COG:MT1494 KEGG:ns NR:ns ## COG: MT1494 COG0364 # Protein_GI_number: 15840906 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-phosphate 1-dehydrogenase # Organism: Mycobacterium tuberculosis CDC1551 # 22 528 9 514 514 742 70.0 0 MRCTRITTMVRMTDSVSATPTAWTNPLRDPRDLRLPRIAGPCSIVIFGVTGDLSRKKLLP AIYDLANRGLLPPSFGLTGFARRDWTEDHFRDFVREHVQQHCRTPFRESTWKQLAKGIRF VQGTFDDSAAFARLSDTVAELDRDRGTRGNHAFYMSVPPRAFPVVARQLADCGLARSSEG AWRRVIIEKPFGHDLASAKELDRVVSEVFDPSSVFRIDHYLGKETVQNMLALRFANAMYE PIWNANYVDHVQITMAEDIGVAGRAGYYDGIGAARDIIQNHLLQLLALTAMEEPVSFTAS DLTAEKTKILSAVRLPKDLAAHTARGQYAAGWQGSHDVVGYLEEKGIDPASTTETYAAIR LDIDTRRWAGVPFYLRTGKRLGKRVTEIAVVFKRAPHLPFESTATRELGKNAIVIRVQPD EGVTIRFGSKVPGGTAMEVRDVSMDFSYGRSFTESSPEAYERLILDVLLGDPPLFPTTEE VNLSWKILDPIEEFWSTLGQPQPYRAGTWGPTEADEMLARDGRHWRMP >gi|197324944|gb|DS990230.1| GENE 325 379528 - 380517 983 329 aa, chain + ## HITS:1 COG:MT1493 KEGG:ns NR:ns ## COG: MT1493 COG3429 # Protein_GI_number: 15840905 # Func_class: G Carbohydrate transport and metabolism # Function: Glucose-6-P dehydrogenase subunit # Organism: Mycobacterium tuberculosis CDC1551 # 1 318 1 294 303 217 42.0 3e-56 MIIEMPNTRTREISQKIDELHEERGESATGRVLTLLISTTEDELEQALELANAASREHPC RVIAISPRRGNGARKPVEGAPKPAEDADAAYDNSNLDAQVRFGADAGAGEIIVLHPRGGL VHHPDTLVIPLLVPDAPVVAWWPNEAPANPSKDLLGAMARSRITDAMHSSNPYRTIEDLR RNWSPKNVDMAWTRLTVWRAMLATMLDQPPHLPISTVKVSGPKGFLPMDLLAAWLRLKLN VPVIMEEVPGATAVTGVYLTRADGTLSLERPDAKEGIAVISTPGQSPQSISVPTRTLEEC LSEELRQLDPDEVYAEVITQGWNLIHPAE >gi|197324944|gb|DS990230.1| GENE 326 380686 - 381474 1005 262 aa, chain + ## HITS:1 COG:MT1492 KEGG:ns NR:ns ## COG: MT1492 COG0363 # Protein_GI_number: 15840904 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase # Organism: Mycobacterium tuberculosis CDC1551 # 10 262 9 245 247 144 40.0 1e-34 MSQRKTVTCPNPDVLAQAVAVRVLTTIRNLLAEPGRSRVDIALTGGTDGNRVLRAIGTDP LADDLDASRVHIWWGDERFVPEDSDDRNAKQARRFLNILVERGLMPEENIHEMPADTRDA AQIAAATDEENDAVLADAAAAYQKELIEQLGEEPTLDIALFGVGPDAHFASLFPGRPEVL IDDPHVLVAGVRDSPKPPPLRVTLTVPIIARSRRTWVFASGERKADAVAAAFAQPRNSQA PSSFADGEELIWYIDQDAASKL >gi|197324944|gb|DS990230.1| GENE 327 381664 - 382215 -96 183 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1444 NR:ns ## KEGG: BBIF_1444 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 183 33 215 232 345 97.0 6e-94 MAMRFDDRTGQSGRIANFVHSARGFIACPVRSGMRMGCSARSAQGCDADACTTPAKWHNA RVVRGGICTTAVENDCAHCCTPTEFLETLEFQRNEEWCARSLGTVYVQLLRLPTMRALYR RICTAGGDWALIGDVGMRLVAITVREKRLCEKWESHDMNGVPMKHDGADAPRGACAIIRM VRV >gi|197324944|gb|DS990230.1| GENE 328 382331 - 383779 1824 482 aa, chain - ## HITS:1 COG:Cgl1417 KEGG:ns NR:ns ## COG: Cgl1417 COG0362 # Protein_GI_number: 19552667 # Func_class: G Carbohydrate transport and metabolism # Function: 6-phosphogluconate dehydrogenase # Organism: Corynebacterium glutamicum # 5 473 8 476 484 598 63.0 1e-170 MTAEANVGVVGLAAMGASLARNLARHGNKVAVFNRHYSRTEKLITEHGSEGEFFPAKTME EFVASLKKPRTAIIMVKAGEPTDAMIGQLADLMEPGDIIVDAGNAHFPDTIRREKAISAR GLHFVGCGVSGGEEGALLGPSMMPGGSEESWKTLKPIFESIAAKAEGEPCVTHIGENGAG HFVKMVHNGIEYSDMQLISESYDLMRRALGMTPAEIGDVFEEWNKTELESYLIEITADVL HQVDKKTGKPLVDVIVDHAGMKGTGTWTVQSALDLAVPVTGIAEAVFARGLSGQAELRAE AQKQDFEGPSGVVPMAEEDKVAFINDIREALYASKIVAYAQGFNEITEAAKVYDWKIDLA AVARIWRGGCIIRAKFLNRISDAFENGEANVSLLFAPYFKDAIETAERSWRRVVSRAITF GIPVPVFASSLEYFDGLRSPRLPAALIQGQRDYFGAHTYQRTDMPGAFHTLWAEPGREEI IA >gi|197324944|gb|DS990230.1| GENE 329 383901 - 384713 827 270 aa, chain - ## HITS:1 COG:Cgl0595 KEGG:ns NR:ns ## COG: Cgl0595 COG2197 # Protein_GI_number: 19551845 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain # Organism: Corynebacterium glutamicum # 53 267 2 227 230 189 50.0 6e-48 MGQADSTSIGPTSGADARQGAAGEFGSVECNDVESGRATDTDTTPREAAATPIRVAVVDD HEMFRAGVIATLQPYFHIVGQAADVEGSIAMIADIRPDVVLLDVHVPGGEGGGGAEILAK SQPLSPASAFLALSVSDSPQDVGSVIRAGARGYVTKTITGDDLISSIKQVHEGYAVFSPK LAGFVLSAFQGAPMDGAGGARGRDEELDLLSGREQEVMRLIARGYTYKEVAAELFISIKT VETHMSNVLRKLQLSNRTELTRWAADRRIV >gi|197324944|gb|DS990230.1| GENE 330 384731 - 386176 1132 481 aa, chain - ## HITS:1 COG:Cgl0594 KEGG:ns NR:ns ## COG: Cgl0594 COG4585 # Protein_GI_number: 19551844 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Corynebacterium glutamicum # 59 445 3 352 352 136 33.0 1e-31 MTQPNNPYRQPHAPRRTQWQARRAQPPSAAPSLPLMRPRNGRALVGVCRGVSLHLGAPVW LVRLAFAAAALAFGAGVIAYVFLWMFMPVGDPVAAAQAMSDAASTGFAEPLSRGNAAYAG TAGDSGRSDADDSSEGLAAALRRAPKPSLVALAGLVFIAISVLLSFAGGRELILPLAVAV GGLGLAWSRFDADEGKLPSMLGGIVLLFVGYAIFVFTSTVPGWGASPRRIIIGGFVLLAG TALAIVPWVSTLIRSLSTERALKEREEERADMTAHLHDGVLQTLALIQLHSDDPQTVFSL ARQQERELREWLYQERTTSDRSVSAGLKAIAAQTEDEHGKPIEVVTVGDARPSAQTDALL DATQQALINAVTHGGEPISVYCEAGADKVEVFVRDHGDGFDVNAIPEGRLGIRESIIGRI RRRGGTVEIVSRPHWGTEVRMHMPVAGGRQPNQRGDATNAGGQHGRPPSGAASYTRTQRE T >gi|197324944|gb|DS990230.1| GENE 331 386254 - 388005 1230 583 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1440 NR:ns ## KEGG: BBIF_1440 # Name: not_defined # Def: hypothetical protein containing PspC domain # Organism: B.bifidum # Pathway: not_defined # 1 583 1 583 583 1032 98.0 0 MRAAAGCCCNGSMNDTTYAYDAGGAAGPGTNGSDSYGSNPYGSPAPGPQPKPKRQRDRFF SWIRGSAMERGDDRWIAGVCSAIAQRVGWSPTLVRALVLASVVLCGFGLALYAIAWALLP DARDGRILGEELIDGRWDWNMLGVIIMMMLAVAVPGAGLAAALCAALVLWALVQNANRRH GGYGSGSGVSGASGTGDSENGSYRRGWPASSYAYDGADTGEQAADAGTAGSSGPTAPEAA GSAAESSGASVRQPFQQPAPGYGFGQPHTADRPARPPMPYQSSPYRPSAGPLPPKYERRK PAGFAIVIGMIGLMLVSGAVLMLANDNSSIESMTRVLTLWIGGVCLALGAVITVLGLMGR RSGGLIPLAWTAAFVAVCVLGVNVAYSYTVDAMQSEGGTLVNVRGVTKYGVTDQQIARLQ QGVRFVGTNYGDDRVSIDLTRDGVPGISPHKVTDVDGKVRQSTCPVGDLRISAYRARVIL TLPQGCSFAFGKRSDGYRLVGSIGGRYTITRNQWGYDFLRLDNTFSGRSGEKPACDGGAS NLDYSTIPEGGPELIINVPYTIEGKVAVRYVDDSGGCSSDDAL >gi|197324944|gb|DS990230.1| GENE 332 388038 - 388991 793 317 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1493 NR:ns ## KEGG: BBPR_1493 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 317 1 317 317 457 98.0 1e-127 MNDDHDMTRHLPNAEAMPADFEQTEALPTLVGGVSEQASAVTQALPVEPTQTLPVAETEA MPVEKVAVPQTETKSLPVDSASTEKLSAEPLAAGAVSDESAAPVDDGQTETEPAADAFGS PAAASDRRTGDVPAGATTAGDVPDKGQPLAAAPSTGAGATQQPDAATAFAAGDTEQPGPA SQQIPLYSTQPPREHDGYGPNRPDAGPAYAAPAGPWVQPGAGSNYVQVPRDVPVRPVIRK TGPSAATLTLGVFMLLVGAVAILFGVRFPNGVLAWFDMDPRVMFAIGCAVVGGALILIAI IWSLAKIARNARTPHDE >gi|197324944|gb|DS990230.1| GENE 333 389046 - 389657 617 203 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1438 NR:ns ## KEGG: BBIF_1438 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 203 1 203 203 386 100.0 1e-106 MSDQLIERIVRHEWDQFQRTNNEGGRAACQGNWPVFRQMRTSQFMTWPDPLLDSYLADLV EAERVGRNLVTEKYGRMMESTAPQDFHDNIEPYIPRLSDERIATQEHVIATQVAWAEDFR ARYPKLGRAMRVLRTAEDTAQSTSFETYLRGELGTYSERTMALYRRFVDDLLRKGRNLTE ETIAHTVALAGFADLAEAEAAQG >gi|197324944|gb|DS990230.1| GENE 334 389726 - 391801 2307 691 aa, chain - ## HITS:1 COG:FN0847 KEGG:ns NR:ns ## COG: FN0847 COG0457 # Protein_GI_number: 19704182 # Func_class: R General function prediction only # Function: FOG: TPR repeat # Organism: Fusobacterium nucleatum # 59 596 26 527 599 189 28.0 2e-47 MDDDALMAKLMAAFDDDAAPDQAGDEPRPSEQPFDTQRFLAGLDAIFDAHAAAKAGPYLE QAMIDAENAGDDAGLLTVLNETMGFYRSQGRHKENQWIVQRALELATRMGITGTEAWTTT LINAATAMRAAGQYDQSEDLYKQAQASSERTLAPSDRRLAALHNNLSMLYSETGKTHQAE VELGEALRILESSSPDAETDLDVASTHTNLALTLLAEDKLSAASWHAAKALEIYRNGHLE HSAHYASALAGYAQVRFHQHDYGQAVNLYCQALQVIEECYGKDTDYYRITESNLRQAEHE ASEHAPANVSQDVSQDVSQDASAGGNGSGTPGTALAGTPSAAVPSATASPTGTSPICGLK LARECWNAYGKPLIADKYPEYQGRIAAGLVGHGSECYGFDDDLSRDHDFGPRFCLWLTDE DYAAIGERLQADYEALPQSFMGYGPRESTARAQGAGRRDGVFRIGDFFESITGYRQAPST NNPHEWLMLDEATLAAATNGEVFADPLGKFLDTRQGFKTMPEDVRLALISKRLGMMAQAG QYNVPRMLARGDGAAAWLSIGEFVQAAASLVFLLNNPITVGYLPYYKWRFAALRRLSSRM AARLADVCGQLETLLRLSSAACYGGAGFGEGGKGSAPVAEKISQTIEHVCAEVVAELRRE GLTGSDETFLEWQRPYVEEHIASDAACLHSL >gi|197324944|gb|DS990230.1| GENE 335 391853 - 391924 62 23 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MTFSACDVSYITNPRSQNSQIYR >gi|197324944|gb|DS990230.1| GENE 336 391980 - 393146 1576 388 aa, chain - ## HITS:1 COG:araJ KEGG:ns NR:ns ## COG: araJ COG2814 # Protein_GI_number: 16128381 # Func_class: G Carbohydrate transport and metabolism # Function: Arabinose efflux permease # Organism: Escherichia coli K12 # 1 369 8 375 394 233 40.0 4e-61 MASGAFILGAAEFVMMGILPQTAEAMHVDIPTAGHFISAYAIGVCIGTLILVFGRKIPPK QLIIMFMVIAFVGNALSAFSVNAPMLLAARFISGLPHGAFFGTATLIAKTVADKGKEAQA VSAMVTGQTVANMIGVPAGTLMSEFLSWRLAFIVLSVWAAMTVFLALAWVPAIAPVKDVG LAGQFRFLRKPGPWLILGAVFTGNAGVFCWWSYVSPWLQKTGGYDSDMVPFLMMLAGFGM VVGGIIGGRITDNWRHAGTAALGQAISGVGLLLVFLVPGNHVSAAIFTFWIAFGLFFISA PQQLLMTESGKGGGELLAGAAVQVAFNFGNAVGSMVGGGMLNLSGMNYHFTALGGVPLAV IAVALLTIYSMRHETHTDALERMREITV >gi|197324944|gb|DS990230.1| GENE 337 393534 - 395225 2825 563 aa, chain + ## HITS:1 COG:Cgl2631 KEGG:ns NR:ns ## COG: Cgl2631 COG1190 # Protein_GI_number: 19553881 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Lysyl-tRNA synthetase (class II) # Organism: Corynebacterium glutamicum # 66 559 16 523 526 549 56.0 1e-156 MSQTQETPESLNDDETAPAVPVMTTVERAEMLLRQDAAIRDRIGAGATLDEAVDPSNKEF GPLAHPEQVQMRVAKRAMMLEAGMQPYPVHLDVTDTIEAVRAKYDGKLEAGQETEDVVGI AGRVLFLRNGGGLCFVQLSAGDGTKIQGMISKKEIGADSLKQFKQLVDLGDHLYLRGRVI ASKTGELSVFATEWAIASKALQPLPALHKDLNDDTRTRKPYIGMIADEKVRNMVRNRSKA VASLRRTFDDHDFLEVETPMLQTIHGGAAARPFTTHMNAFDLDLYLRIAPELFLKRCLVG GIDRVFEINRDFRNEGVDATHAPEFTMVEAYQAYGTYDTIGQLVKELVQKTAMDVFGSHK VTLLDGTEYDFGGNWKTISMYDSLSEALGEEIVPNGGPDNPGTSVEHLGEIADKLGVERD DVENHGKLVEHLWEHFYEDKLYEPTFVRDFPVETSPLVKGHRNKAGVVEKWDLYVRGFEL ATGYSELNDPIVQRERFVAQAKDALAGDEEACDIDEDFLEALGVGMPPAGGMGMGIDRLL IALTGATIRETITFPLVKPLALQ >gi|197324944|gb|DS990230.1| GENE 338 395443 - 396408 1115 321 aa, chain + ## HITS:1 COG:Cgl0443 KEGG:ns NR:ns ## COG: Cgl0443 COG1575 # Protein_GI_number: 19551693 # Func_class: H Coenzyme transport and metabolism # Function: 1,4-dihydroxy-2-naphthoate octaprenyltransferase # Organism: Corynebacterium glutamicum # 1 270 11 245 298 178 42.0 1e-44 MTVKLWISGARPKTLTTSLSSVAVGACCAYPVIVGDLNCAQTRSDTSQCAAVTADAQAMM SRFWLVTLLCVCVGVLLQIAVNYANDYSDGIRGVDEGRGGSEKKTKKPMRLTASGLVPAK HVLVAAVVSALLACVCGLVAVVLSQAWWLLLVGVLCLLAGWFYTGGKHPYGYAGFGELSV FLFFGLAAVLGTQYALSGSVSVLGVLCAVVAGLLSCQILMVNNLRDINEDRRHGKRTLAV RMGERGARVMLGVCCVVAWAIGVWVVMLLWTPWGGILMLSGIGVPWRMVTSTGRKEFRKA LSDACFQPPFFAVILLISLMV >gi|197324944|gb|DS990230.1| GENE 339 396486 - 397226 1208 246 aa, chain + ## HITS:1 COG:Cgl0397 KEGG:ns NR:ns ## COG: Cgl0397 COG0588 # Protein_GI_number: 19551647 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphoglycerate mutase 1 # Organism: Corynebacterium glutamicum # 4 246 5 248 248 312 68.0 3e-85 MTYKLVLLRHGQSAWNKTNQFTGWVDVPLTEQGEAEAKRGGELLKEKNVLPDIVFTSLLR RAINTANIALDAADRLWIPVQRDWRLNERHYGALQGKNKTEIRQEYGDEKFMLWRRSYAT PPPEIDPNDQYAQNHDPRYAGDPVPEAECLANVVERVKPYFESAIEPELRAGKTVLIAAH GNSLRAIVKMLDNLSEDEIAKVNIPTAIPLLYELDENFKPVKPRGEYLDPEAAAAGAAAV AAQGQK >gi|197324944|gb|DS990230.1| GENE 340 397270 - 397539 292 89 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1432 NR:ns ## KEGG: BBIF_1432 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 6 89 1 84 84 112 92.0 4e-24 MGAALLRIRPRPDVCDVGRRGVSSVCETLLGVFGAVAPVVVGGMLRFVPDGFTLIAAVVC ALATAGMVVAVFSPIRTIPASADWERSEA >gi|197324944|gb|DS990230.1| GENE 341 397760 - 398440 951 226 aa, chain - ## HITS:1 COG:MT3400 KEGG:ns NR:ns ## COG: MT3400 COG0704 # Protein_GI_number: 15842892 # Func_class: P Inorganic ion transport and metabolism # Function: Phosphate uptake regulator # Organism: Mycobacterium tuberculosis CDC1551 # 1 216 1 216 221 122 35.0 7e-28 MRVIFDEELKAVADDLDRMVQDVRKAINGAGDALLKQDVEAAQSVIDGDIEIDALESSVI DQCIRLLAKQNPVATDLRVVVSTLRLAATFERMGDLAKHIAEAARRIYPEPALPAEATEL FTEMQQFLSMTADRIVVMLQDRDAKTAEEIILDDDKLDALHHKTFDLALSDKWTGSRQQL IDVVLLGRFMERLGDHAVSASRRVVYIVSGFDPSKEPSRDEDGAVE >gi|197324944|gb|DS990230.1| GENE 342 398624 - 399892 1131 422 aa, chain + ## HITS:1 COG:ML2440 KEGG:ns NR:ns ## COG: ML2440 COG0642 # Protein_GI_number: 15828318 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Mycobacterium leprae # 15 419 4 375 441 150 32.0 6e-36 MPQFQPSVWIFVVFALLALAALAGIGFFIADRLQPVIMNALRSNDRLPSLQSRRRSARRR QEDDEPADDLDDSTQLVLSMLSLASVVVDDQDEVVRANPAAYRLGLVRDDTLIEPTLLDA VHKVMKDGSRCSFDLETQTPEQFMTMNGFGAAAADDGLTAEASSRPNWLKVTVGRIGDHL VLVLINDVSESIRFAQIRDSFISNVSEQLLQPTRALERLADSLESADVSHEQLSNHARQV RHSCVRLDRMISDLLMLIKAQEPVTASEANRCDLFSQVSGAVDDLAGAARDAGVQVRVGG KSPVMIHGEADQIRMAVRKMVENAIVYSHPGGAVGVSVALSSDGKNAVVRVIDHGEGVPK ADLPRIFERFYRGSNQNERTTDGIGLGLAIVKHAALAHHGDVTVWSAPGQGSTFTLSLPV GD >gi|197324944|gb|DS990230.1| GENE 343 399899 - 400153 484 84 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1429 NR:ns ## KEGG: BBIF_1429 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 84 1 84 84 152 98.0 4e-36 MKFAAIINPEVRKPAPKPVRVDLRKTFLIGCVLWSVALIVSAILLACGLDVLQLLIMCAA GLIIGVMMLVWEHFDRWDYRRLGN >gi|197324944|gb|DS990230.1| GENE 344 400264 - 401406 1486 380 aa, chain - ## HITS:1 COG:ML2136 KEGG:ns NR:ns ## COG: ML2136 COG1932 # Protein_GI_number: 15828146 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoserine aminotransferase # Organism: Mycobacterium leprae # 5 380 9 376 376 407 54.0 1e-113 MDNIVNIPSSMKPEDGRFGSGPSKIRPEQVDALERGGKTLLGTSHRQTPVKSLVASIREG LGSFFSLPDGYEIALGNGGASAFWDIACASLIVGKAAFGTYGSFSTKFAKSAQSAPFLDD PVIFAGEPGTYRLPERTDGVDTYAWAHNETSTGVSAPVRRVEGSDEQNAIVVVDGTSAAG ALPVDVSQTDAYYFSPQKAFGSDGGLWIAVLSPRAIARAQQVEGEAKLEGSRRWVPPFLS LTSALDNARKDQTLNTPSVATLIMLENQVRWLNENGGMAWSTARCAQSAALLYEWAERSE YARPFVADPGSRSNAVVTVDLDDAVSAKQVIAALRENGIVDTSGYRKLGRNQLRIGVFPS VEPSDVAALTACIDYVVEHL >gi|197324944|gb|DS990230.1| GENE 345 401571 - 402593 1093 340 aa, chain + ## HITS:1 COG:SA0710_2 KEGG:ns NR:ns ## COG: SA0710_2 COG3942 # Protein_GI_number: 15926432 # Func_class: R General function prediction only # Function: Surface antigen # Organism: Staphylococcus aureus N315 # 207 339 9 134 134 84 36.0 3e-16 MRHAAHKANKDSVQRTSPSALFRSSRGSHTARAVRAVQAANGDAVALAIDPVLAAKLNEV APMTRRAIRETAKAAQRKSYMMSSASLAALVGTAATALAFSNIQQSSNSRLLADDPATTT TQLARVTGSTVSRSESRTELGPIASDQTAAAATSGAADAKTSNTIADAKSVQTTNNGNWE LNDKNSAIDVSQLSRSLANNPQVAVLVDQDAGKLPEGFNPNHATGDSGLAYAFSQCTWWA YLRRHQLGLPVGSYFGNGQDWANSARAHGYWVDNTPRHKGDVMVFRAGQEGASSVYGHVA IVESINADGTVTISECGASLNGKPASRTLSNVNDFQYIHY >gi|197324944|gb|DS990230.1| GENE 346 402744 - 403550 765 268 aa, chain + ## HITS:1 COG:CAC0309_2 KEGG:ns NR:ns ## COG: CAC0309_2 COG0791 # Protein_GI_number: 15893601 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cell wall-associated hydrolases (invasion-associated proteins) # Organism: Clostridium acetobutylicum # 100 268 3 170 171 112 38.0 8e-25 MPVCYNHASMMICKKIISTITAAAAAVALFTVSVPVALAGSDNASRKAITSSRSFPKMNT ARKDLLKETVSVSSDDSESWGGVESLNVPETKSTAEKKAEEEAKKAEEERKAAEKAAAEA ARLQAAEVSRSRASAATSSTSSSSVSNDGAVDAPVSANGAGVVAYASQFQGVPYVYGGTT PSGFDCSGFTQYVYAKFGISLPRIDYQQRVWAQAHGTKVNDPQPGDLMWRSGHVGIYVGN GLMIHAPRPGKSVSIVPVYASFEYYRII >gi|197324944|gb|DS990230.1| GENE 347 403830 - 404870 1358 346 aa, chain + ## HITS:1 COG:Cgl2878 KEGG:ns NR:ns ## COG: Cgl2878 COG0589 # Protein_GI_number: 19554128 # Func_class: T Signal transduction mechanisms # Function: Universal stress protein UspA and related nucleotide-binding proteins # Organism: Corynebacterium glutamicum # 1 287 1 293 301 120 32.0 5e-27 MINEKAILVGVDGSHASYKATWWAANFAKHTGLTLQIVCAYSLPSYAAVSFDATYTAMGD DNAAHSDAQEILSKAKAIADEQGVEAATLIVTGDPASVFVELSRNYNLIVIGNRGKGGLA ERLLGTTSSSLPAYAYCPIVVVPYTDDDGNLMHLNNTITKVAVGSDESKWGLKALDIAAS FANMWGAELDVISAAPKVQGSDGDKAVMESFMEDLEVRIKPIEESYPDLKITRTVVPGNA VQALTKASYDHDVVVVGSRGRGGFTGLLLGSTSQGLIQHAVGPVYVVPRKYVEAAESRLD TVPSSPADVEPKPLESIGGVEELPVPAAQPEVVEQIDSAIDPEHKA >gi|197324944|gb|DS990230.1| GENE 348 405014 - 405427 536 137 aa, chain - ## HITS:1 COG:MT2992 KEGG:ns NR:ns ## COG: MT2992 COG1765 # Protein_GI_number: 15842468 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted redox protein, regulator of disulfide bond formation # Organism: Mycobacterium tuberculosis CDC1551 # 4 133 3 132 137 70 34.0 1e-12 MGKRLWVERNKDGSWDAFSDDGAHIKFGKGRGVFTPGDLMKIALAGCAALSSQFAIEHTL GDGKGARIVVDGTYDADSDAYINFNEQVVVDATDAKLSEEDADKLKERVTRHIEKGCTVK HTYVQETPVRMDVTVRR >gi|197324944|gb|DS990230.1| GENE 349 405983 - 406753 1005 256 aa, chain + ## HITS:1 COG:MT2834 KEGG:ns NR:ns ## COG: MT2834 COG0207 # Protein_GI_number: 15842302 # Func_class: F Nucleotide transport and metabolism # Function: Thymidylate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 4 256 18 266 266 389 70.0 1e-108 MLEGTLKSDRTGTGTISLFGQQMRFDLSEGFPLLTTKTVFFKGLAYELLWFLKGSSNVRW LQEHNVHIWDDWADENGDLGPVYGVQWRSWPAPTSEDPNRTIDQIGNVLDLIRNHPDSRR MVVSAWNPAEVENMALPPCHALFQFYVADGRLSCQLYQRSCDMFIGVPFNIASYSLLTMM IAQQTGLEPGEFVWTGGDCHVYDNHVDQVLEQLSREPYPYPKIEIRKADSLFDYQYEDFT IVDYRHHPTIKAPVAV >gi|197324944|gb|DS990230.1| GENE 350 406801 - 407460 864 219 aa, chain + ## HITS:1 COG:ML1518 KEGG:ns NR:ns ## COG: ML1518 COG0262 # Protein_GI_number: 15827800 # Func_class: H Coenzyme transport and metabolism # Function: Dihydrofolate reductase # Organism: Mycobacterium leprae # 36 217 4 164 165 127 43.0 1e-29 MEHDSSRNGYHEPEPGFAGQEKADDWGDDFPKTFSVNLIWAEADDKDGRPGAIGFDGGMP WHLPEDMKRFKELTVSHPVIMGRRTWESLNVKYRPLPNRDNIVVSHNPQYLALGATVVTD LDAALDIARQEAIPDDGLDRSEIWVIGGAQVFQEALPFASKAFVTKIQTSVDADTYAPDM DALVDAGLWEVADPGHWKRTQKDDSGIKRYRFVTYRKIG >gi|197324944|gb|DS990230.1| GENE 351 407530 - 408048 622 172 aa, chain + ## HITS:1 COG:MT2293 KEGG:ns NR:ns ## COG: MT2293 COG0394 # Protein_GI_number: 15841726 # Func_class: T Signal transduction mechanisms # Function: Protein-tyrosine-phosphatase # Organism: Mycobacterium tuberculosis CDC1551 # 6 172 4 158 163 102 40.0 4e-22 MTQQHPYTVMTVCTGNICRSPMAEIILRAEFESRGIGEDRVRVLSSGVSDEEYGHPIDPR AVRVLRADGYEIPTHHFAHRVTREEIEETDLFLPMTASHMRALLRQLPSSKRAEVHMYRS FDPNLPKPAAGREDSIDLVDPWYGGPHEFQVAIGQIQEVAPYIVDWVERQIG >gi|197324944|gb|DS990230.1| GENE 352 408275 - 409330 1179 351 aa, chain + ## HITS:1 COG:CAC1480 KEGG:ns NR:ns ## COG: CAC1480 COG0673 # Protein_GI_number: 15894759 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Clostridium acetobutylicum # 17 341 3 317 320 167 31.0 4e-41 MSRLNGRRAEAEAQGLRINVAILGAGRIAHSMARTLVAMAADPRYAGLVAPYAVAARDGG RAAAFAAEYGFPVSYGSYDELLADPDVDLVYIATPHSLHAEQGIACLKAGKNILVEKSFT ANAAQARALLDAADGSGLLCTEAIWTRYMPSRAIVDRIVASGAIGELRSISANLCYPVSG KARMSDPAMAGGALLDVGVYPLNFIDMVMGGHGEVPVERVETSMTPYAPTGVDAQNSTTL YYANGVMAVSTSSMLACSDRAGCIWGDKGYVVCRNINNIEAIDVYGADHAVAEHYDVPAQ LTGYEYQVAAAANAILDGREECAEMPHADSLRIVELMDELRAKWGLKYPFE >gi|197324944|gb|DS990230.1| GENE 353 409400 - 409648 380 82 aa, chain - ## HITS:1 COG:BS_azlD KEGG:ns NR:ns ## COG: BS_azlD COG1687 # Protein_GI_number: 16079723 # Func_class: E Amino acid transport and metabolism # Function: Predicted branched-chain amino acid permeases (azaleucine resistance) # Organism: Bacillus subtilis # 1 82 29 110 110 95 62.0 3e-20 MFPESKQPPKLVEYFGKALPYAMTGLLVVYALRNTPILTGSHGIPELIACAVITLLHLWK RNMLLSTAGGTAVYMLLIQLVF >gi|197324944|gb|DS990230.1| GENE 354 409940 - 410575 226 211 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 1 189 1 199 223 91 33 5e-17 MSNCLQLDHVDYAYGAAKILVLSDVSADFESGKMYAITGPSGAGKSTLLSLLAGLDAPSR GVVRFEGEDIATSGYAKHRREHVSLVFQDHNLIDYLTPEENLRLVSTKADMKILEELGLS REESKRNIMHLSGGQRQRVAVGRALVAPGRAILADEPTGSLDPKMTDEVIHLLQHAAHQL GKCVIVVTHSKRVADSADVVLRLRSKKLTRV >gi|197324944|gb|DS990230.1| GENE 355 410588 - 411808 1138 406 aa, chain - ## HITS:1 COG:SP0599 KEGG:ns NR:ns ## COG: SP0599 COG0577 # Protein_GI_number: 15900507 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 45 405 5 386 387 126 27.0 1e-28 MSMNVWKRATLAIVRKPVRSGIIGLLMLMVFTSLVAQVGVSTALRTMSDSIGAGMGIGFT VSAGENPISAEEASRFSRIPGVTKTAYATKTLAQVDGARPVMPRQGPRLDSDLAMQVSVL GTTDSSLSEEFQSGLYRLEQGRHISGDGDNVLVHRDFALQNGLSVGSTFRLRQEGRNATV RVAGIFSGNVQAQSPLPSDTSENLIYSGRRVTSALTGNDQIGMIRCLSDNPQDLSAAVSQ AKTMAGGKYDVTDDSARLSGVLQSVQTVRDLVRMVLLSVCLADVLVLAMALVFWIRSRIH EIGTLLALGIGKMRIVAQLAIETGLMAVVAALCSLGTGAMLSGYVSSRLLRDSGVAPLES LHVEALPPEQTLLILLLGCAVIAVALAVSCAAVLSKSPKSILSSMR >gi|197324944|gb|DS990230.1| GENE 356 411808 - 413175 1289 455 aa, chain - ## HITS:1 COG:SP0601 KEGG:ns NR:ns ## COG: SP0601 COG0577 # Protein_GI_number: 15900509 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Streptococcus pneumoniae TIGR4 # 10 451 8 454 459 217 31.0 5e-56 MTFVARSVRYVLRKRVRTIVLLIVLTIITASMLSTIAVSRAAQQAAGRIEKEAVGGFVLA SNLQGSMLTPRGGGMVRPADVRRIAQLPGVDSYMVRQNATADLVGANVAKVPGGDDYDAT KEQQFGNAANVIGTNDSSKLNVFTSRTLGMAEGRHLKASDKYTSMIHEDLAKANGLKVGD TLTLKANAYDADNESHSTATVKTTIVGIFKGDSARKVSSRAELTANTIYTDLDTTRDLYQ YKDGKEIYQDATFVLSKGVDVEKTMDAAKKLPVDWNNYQITRNDQYSSSMLHAARGVRSM MRGALIGVTVSAVLVLSLMLLLWMNDRRQEMGILVSLGVGKPSLVAQYLTEMVLIGLPSL ALGWLCAQGMAQWLGTTALHSVNASAAKELSSMGQVGGDLESSMSVRTLDSLTVSVDGTA MLYVALGLLAVMLVCVAVACIPMLRKSPRDLSEIR >gi|197324944|gb|DS990230.1| GENE 357 413380 - 413661 181 93 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1415 NR:ns ## KEGG: BBIF_1415 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 93 1 93 93 161 100.0 7e-39 MLIGSSLVCMTRGRTVCRGGANGASSDGLAHGVCVADVADVAGGNIDDGVAGACSGESDV WHKTVICWLVLVAYLYIQCENYAFAASKARRER >gi|197324944|gb|DS990230.1| GENE 358 413838 - 414920 1388 360 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1414 NR:ns ## KEGG: BBIF_1414 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 360 6 365 365 575 100.0 1e-162 MKATAVISEAWRSITSGAARLAPAVLALALTAAGMGVMDIAAGSTILDQASAYRQSGADI LVLNAPDGIDAASCERLTSLTNVQAAGAIRTTDPLTLAALPDTTTPLYQITPGLAKLLDT KQDPNTTGLIASQQVAETLGTSTGGTIGLADGRTARVKGIYQYPDDGRTPGYAYALMEET PATGTFDACWAKTWPQTDRTRNALWSTLTPNAKTTGDDAPTLGQLNTTKGDGFDGQTLYR QRSTRILPACGALIALAIGYLLIRGRRLEIASALHCGVPKPALATQIIIETGITILLATA ISLPIDMTAARLLIDTTDRTAITLNAIQTTITTNTAYLLATTITALHIKERHLFTYFKER >gi|197324944|gb|DS990230.1| GENE 359 414932 - 415534 219 200 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|157164682|ref|YP_001467345.1| 50S ribosomal protein L25 (general stress protein Ctc) [Campylobacter concisus 13826] # 12 186 14 204 223 89 32 3e-16 MRVDLDHVGHRYADGPLLFHDLTASLMPGHVYALTGPSGAGKSTLLGIIAGWTTPAEGQV TRQGIDSMRWIFQNPHGVAQRTAIDHVSLPLLAKGLPRREAEEQARTLMDRFNLTRVTDR RFAELSGGEAQRLMLARAFAAQPSLMLVDEPTAQLDMHTAATVSESLSRIARNDTIVVVS THDPNTRDACTDIIDLKNYQ >gi|197324944|gb|DS990230.1| GENE 360 415524 - 416210 745 228 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1412 NR:ns ## KEGG: BBIF_1412 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 228 120 347 347 363 99.0 3e-99 MTALQNELAALGYGGSRSGVFDWATWDAWRRLYAANAGTATAAARVQQGAFSRALAVWLP AQTMSVSCAASLGSTVTGDSTDSLAFRSLAGVASVKAASLPDGRIQGDRVVEINGRDYPI GDDGIVSDTAALQAMAGWSTYTGAHKDGEDVTSVTVTYKLKKPIGVYSVPASALTGLKGS DGCVVATDGTSVKAHVAGSSLGRTLVTIDGKAPASIKADQGQAVCDAR >gi|197324944|gb|DS990230.1| GENE 361 418775 - 419113 266 112 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1412 NR:ns ## KEGG: BBIF_1412 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 8 111 15 118 347 183 100.0 2e-45 MAACLAAGMGLAVGLERTMTPPSLSDSSDAGNLALGSEEFDDVRSLNVDVTASPAGGVAF PVSGRVTFASCPADGVVRSGSREYGVDGTPLVSLHTDTPLYRDLAYGDKGDS >gi|197324944|gb|DS990230.1| GENE 362 419199 - 419861 715 220 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1411 NR:ns ## KEGG: BBIF_1411 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 220 2 221 221 354 100.0 2e-96 MNMKKGIHMSKDALRVVAAAGVLSVVLGLGACSMPGSGNAGASDGGSSSSSSSSGSSSYE AELKQALQSASSDFERGVLERAVKAGRISESDYREANEKYQECMAAKGDDVEFDTDQSTG LMQEHMNTDDNYDSAKANEDSMACAKGTNLQIRDLYERMVQNPSNADEIELVVGCLKRRK LVPDSFTKQDYLTEMGKPEGSSKLDTSSDAFSQCLANPSK >gi|197324944|gb|DS990230.1| GENE 363 420050 - 420706 353 218 aa, chain + ## HITS:1 COG:FN0585 KEGG:ns NR:ns ## COG: FN0585 COG0745 # Protein_GI_number: 19703920 # Func_class: T Signal transduction mechanisms; K Transcription # Function: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain # Organism: Fusobacterium nucleatum # 1 215 1 218 224 127 35.0 2e-29 MKVLIVEDNANLADVVRMGLSMEGMEAKAVYDGRDALEELNSGEWNMLILDRDLPGLHGD EIAKRLSERRDPIHILMLTAASQTEDIVRGLDLGADDYLTKPFEYAELLARVNAVRRRLS MVNDMVYNRDDFSADFRTGSITVRGAELKFGKRELAVLRTLIEARGAVISAECLYREIWQ DDHAHTRGIVKTTIYAIRTKIGITDFIETVPGQGYRIS >gi|197324944|gb|DS990230.1| GENE 364 420703 - 421989 452 428 aa, chain + ## HITS:1 COG:BS_yclK KEGG:ns NR:ns ## COG: BS_yclK COG0642 # Protein_GI_number: 16077444 # Func_class: T Signal transduction mechanisms # Function: Signal transduction histidine kinase # Organism: Bacillus subtilis # 117 427 164 469 473 95 27.0 1e-19 MKKPEYPSSNGSHSSHPKLRLPFQWSTRRRLVTTIVIVFFMLTGVVTAMTYYVVNRQLET VTVNKSFTQAEDADEQHSLNSQAIPPDSGKDYVSAGYDSGKDALTLTMEQGDIKSRDLIL AVSIAPIIVFGILSGGITWIIATRTQRRINSVASQIIASDAGLERQPIVIPYENDEAYTI ASAYNLMLKDLNSAISREKEFIADASHELKNPLAATSAALEIPLHNQLFDERCRPFVEKA LASNHAGVEIVNHLLELSKVQQLNRADLSRVNVAEIIRNVLQENMELIGDRVQVHTNLEN AYILADGLLIRQMIANLITNAIQHNRAAQPHVWINLANDRQYEGESCIAIDISNTGMDLS DTRIDDFLSPFNRGEDNRINTHVGSASPHHGLGLSIVREIVAMHHGHLSLQARPEGGLRI IILLPDTL >gi|197324944|gb|DS990230.1| GENE 365 422009 - 423175 1041 388 aa, chain + ## HITS:1 COG:BS_lacR KEGG:ns NR:ns ## COG: BS_lacR COG1609 # Protein_GI_number: 16080470 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus subtilis # 56 383 1 328 330 197 36.0 4e-50 MLLHMPATPLCIAPIAGTCAVYQSWVNFHAANAANPAFPGYAVVKPFTKVCGEDVMATLK EVAGRAGVSQSTVSRLLNDPSFSIKEETRRRVLRVCEEMGYRNVFRPAIAVLDAPPSGEE LQDAYFADLRKVLAERAESLELDQLTFIRSIHELTERATEFDGFITVGATVFPEADLRAL HMVLPHGVCIDTNPAPRLFDSVCPDLSQTMLDALDAMIAAGRSHIAFLGGVGSIMGMHDY PEDIRELSFRQWAAHLGLETDGLVYSSGTFTVENGYRLAEQLVADHREAGSMPDGLIVAA DVLAVGALQALNALRVEVPDELAVVSVNNQSIARYTSPPLSSYAIDQRELARMAFSTLID GLKHERRVRRHILLTTELVPRASFVPQA >gi|197324944|gb|DS990230.1| GENE 366 423166 - 423669 445 167 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1461 NR:ns ## KEGG: BBPR_1461 # Name: nagA2 # Def: N-acetylglucosamine-6-phosphate deacetylase NagA2 (EC:3.5.1.25) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 167 1 167 167 268 100.0 5e-71 MHHHAAAGPAYDAAIEATGAAAADGTGEEAFERAGHAVHGTTRQVLSLITNPMDVICRNI RTVREKMATRPDILGCHLEGPFLALKCKGAHDSNCLKDPMPELMDRMLDASGADLAAGKL GCIRQITISTPPTGPPNTSGAPAARWSKLLPAKSTPVPPVFETTSYA >gi|197324944|gb|DS990230.1| GENE 367 423688 - 426846 3436 1052 aa, chain - ## HITS:1 COG:BH2723 KEGG:ns NR:ns ## COG: BH2723 COG3250 # Protein_GI_number: 15615286 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase/beta-glucuronidase # Organism: Bacillus halodurans # 23 1048 8 1012 1014 746 39.0 0 MNTTDDQRKNGDPIVSPSIPTTAWLADPRVYAVHRLDAHSDHACWSRSPVDGESTNLRQS LDGEWRVRVETAPTGRFPDGTSDGPDWISDVSPLFAAPGFDDSSFSRVQVPSHLETAGLL APQYVNVQYPWDGHEDPKAPAIPEHGHVAVYRREFDADGEVAQAVREGRPVTLTFQGAAT AIYVWLNGSFVGYAEDSFTPSEFDVTDAIKVDGNVLAVVCYEYSSASWLEDQDFWRLHGL FRSVELNARPAAHIADLHADADWDLATSRGSLSLDVLIDGAANAATVDFALWDKNGTIVW HTATKADGTLHAEAEIDDAAPWSAERPDLYELSVTLLDADGKVLETARTRIGFRHVAIED GILKLNGKRLVFRGVNRHEFDCRRGRAITEEDMLWDIRFMKRHNINAVRTSHYPNQSRWY ELCDEYGIYLIDETNLETHGSWNSPGDIPVGTSVPGDDEAWLGACIDRLDSMILRDRNHP SVLVWSLGNESYAGEVLKAMSAHAHRLDPGRPVHYEGVNWNHAYDGISDFESRMYAKPAE IQDWLEHGDERGEASKPFVSCEYMHAMGNSCGGLSEFIDLERYERYSGGFIWDYIDQGLV QRLPDGSERLSVGGEWGDRPTDYEFVGNGIVFADRTPSPKAQEVKQLYSPVKLAPDGHGV TIENRNLFAGTDGYVFAARLLEDGHEIWHADYRFDVAAGDTQHHDIAFPDIDADGDTREV TYEVDLLLAEATAWAPAGYELAFGQLTGTLNPEQDITETSHDDDGRATRTLSRWNAGIRR DDEEILLSRTQGGIVSWKRDDREMVIRRPELVTFRPLTDNDRGNHSGFDRAAWFAAGRYA IVTETKIHESDDGLVAEYQYELADPNHTPVSVTYHVNSDMRMQLTVEYPGNATDMASLPA FGIEWELPGEYDRLRYYGPGPEETYRDRKQGGKLGIWDATAKASMAPYLMVQETGSHEDV RWLEATDIQGHGLRVTQRGDRHFTASLLPWNTYTIEAARRHEDLPKPRHNYLRLLAAQMG VGGDDSWGAPVHTAYQLPAGRPLTLDVNLELI >gi|197324944|gb|DS990230.1| GENE 368 427212 - 428687 2160 491 aa, chain + ## HITS:1 COG:ECs5102 KEGG:ns NR:ns ## COG: ECs5102 COG2211 # Protein_GI_number: 15834356 # Func_class: G Carbohydrate transport and metabolism # Function: Na+/melibiose symporter and related transporters # Organism: Escherichia coli O157:H7 # 24 462 4 426 469 115 24.0 1e-25 MSGSTTQHTETTGRPQPTRNTGQKIAYAFGNLGQAAFYNTMSTFFITFVTTALFIDVDKT LAKRLIAVITGLVVVIRIAEIFLDPLLGNLVDNTNTRWGRFRPWQFIGGIVPGILLIMVF TGLFGLVDVNTGVFMVLFVIVFILLDVIYSLRDISYWGMIPAISSDSHERSTYTALGAFT GSIGYNGVTVIVVPVVSWFTWKFTGQWEQGRTGWAAFAIIIAVLGLLTAWSVAFGTRENQ GGLRAKAEANGNPIEAFKAIAQNDQLLWVALSYLLYSVANVATTGVLFYQFKYVLGAPDS FSIAGIIPVITGLGTTPLYPVLNRRIPRRWLYTAGMALMIAGYTLFIIAPMNLPVVIVAL VLFYLPAQTIQMTAILSMTDSIEYGQLKTGKRNEAVTLSVRPMLDKIAGALSNGIVGFVV VAAGMVGNATAADMTAANIRTFKTCAYYLPLAGIVASLVVFLLTVKIDENMHAHIVEQLE GRLASEEADKQ >gi|197324944|gb|DS990230.1| GENE 369 428865 - 429110 246 81 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1404 NR:ns ## KEGG: BBIF_1404 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 81 1 81 81 138 96.0 6e-32 MSGDGQHLEARKKASECRDFPQPWSDYLWSLEFEHRPGDAKAFIRRFAAVCLSWSKTSYP KSALLLLPQQPTEKPHPREQQ >gi|197324944|gb|DS990230.1| GENE 370 429449 - 429916 211 155 aa, chain + ## HITS:1 COG:no KEGG:Blon_0536 NR:ns ## KEGG: Blon_0536 # Name: not_defined # Def: hypothetical protein # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 26 155 25 154 154 239 96.0 2e-62 MRGELFITCLLGDFLSKIPGQFVFGSTSLTAHGLSQTALTEPLKMTRGGVSAKMKNKNTW SIPDIAALADYFGVPVTSLLDDTLMRQMLGEGNLGASLVAATTARFPVRAAEGQADGLKP LETKGSEPRYLVEPGAGGYPQRESNSRCQIESLVS >gi|197324944|gb|DS990230.1| GENE 371 430002 - 430913 1118 303 aa, chain - ## HITS:1 COG:HI0340 KEGG:ns NR:ns ## COG: HI0340 COG0220 # Protein_GI_number: 16272292 # Func_class: R General function prediction only # Function: Predicted S-adenosylmethionine-dependent methyltransferase # Organism: Haemophilus influenzae # 47 301 26 244 246 137 35.0 2e-32 MTGETAHRSTAATKEVNGPGIIWHIPRPTRNEETVPEQIEQPTFTPRPVLSFVRRSGRLD ARLQRAWDNYADTYLLDINDGEGSLDVRDDFTLDRDTIAVTWGNANPLIVEIGTGQGENI VAAAAAHPDVNFLALEVYDPGVAHTLLLAGKQRLGNLRIAQVNAPELLAATAPGSIAEVW TFFPDPWPKMKHHKRRIVQPQLAQSIHGALADGGAWRIATDIEDYALHVHEVMDGRTDFR NAGTIAVSLPTGHVGKGNAELADDMPHADFTESERFDDRVLTNFEKKGLAAGRVIHDLTY IAV >gi|197324944|gb|DS990230.1| GENE 372 430968 - 431042 63 24 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MFMCYDKTVRKNNKSEHNQTFNYR >gi|197324944|gb|DS990230.1| GENE 373 431107 - 432120 1312 337 aa, chain + ## HITS:1 COG:all4713 KEGG:ns NR:ns ## COG: all4713 COG1087 # Protein_GI_number: 17232205 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-glucose 4-epimerase # Organism: Nostoc sp. PCC 7120 # 2 321 7 328 332 258 45.0 9e-69 MTVLVTGGCGYIGAHVVHALHQAGERVVVVDDLSYGKPARIEGARLYGMDIAAPGAGDRL AEILDAEDVDSVIHFAARKQVGESVEKPLWYYQQNINGMLNVLTGMTQSKNAKKLVFSSS AATYGVPPVDVVPEDVVPMLPINPYGQTKLFGEWMARACEQPFGIRFCALRYFNVAGCGP VELEDPAILNLIPMLFDRLKKGKAPAIFGDDYPTPDGTCVRDYIHVSDLADAHIAALKYL DRDERKYDAFNVGTGEGTSVRQIVDEVKKVTGLPFTEAVMARRAGDPPHLIGSPKRINEE LGWHAKYDVEDIVKSAWDAWQANPEHHIDVATWKQVS >gi|197324944|gb|DS990230.1| GENE 374 432415 - 433122 706 235 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1455 NR:ns ## KEGG: BBPR_1455 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 235 1 235 235 347 98.0 2e-94 MSSNTPSAMPTDGNDGQVPTQAGYEQAGDGSWAPGAGAADGQVPPYGQGEYGQTGYGQPD YGQTGYSGQPGYGQPQHSQTGSYGAPGYGAQQPQYGAPYGAAQYPPYPLYGANPYGVPAY YAPNDRWNTMSIVGFVLSFVFCPAGLILSIIALRQINRTQERGKAFAIAGIVISAIAIVI VIITIIFAIAVGVYMVNHPEIWNGSYCINGDCVYKDYGDSAFTSLAIMPLAALIG >gi|197324944|gb|DS990230.1| GENE 375 433542 - 433817 112 91 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGLTRLRGLGSACVSVLHAPSTLPPPGLFPLPHSSRNYGLKSPQSVIPRAKSPFLDLKTA IWHGELPRTAISTRNLHPVLVEGVTRARVNP >gi|197324944|gb|DS990230.1| GENE 376 434034 - 434249 67 71 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MRRHEIASLHRPQHEHSGHVIRVWSHPRRAKRDFGRMGVSSECLVRAKSRFSPCGWDFGG MNEGGGMRGSS >gi|197324944|gb|DS990230.1| GENE 377 434492 - 435643 1922 383 aa, chain + ## HITS:1 COG:ECs3659 KEGG:ns NR:ns ## COG: ECs3659 COG1454 # Protein_GI_number: 15832913 # Func_class: C Energy production and conversion # Function: Alcohol dehydrogenase, class IV # Organism: Escherichia coli O157:H7 # 1 379 2 379 383 425 57.0 1e-119 MVYRMIFNQTAYFGRGAIKEIPAVAKSHGFTKAFIVTDPILLKTGTVKKVTDVLDEAGLP YEVFDNVKPNPPVECIQDGVKKFAESGADFLIGLGGGSPQDTCKGIGIITANPEFADVLS LEGVADTKNPSVPIFGVPTTAGTASETTINYVVTDTANKRKFVAVDPHDIPIVAFVDPDL TDTMPRGLKVATGLDALTHAIEGYITPGAWSLSDCLSMQTIRMIAKNLAKSVDGDVPAGE QMAYASYITGMAYSNVGLGLVHGMAHPLGGRLGVAHGVANGILLAPVMEYNKDFTGEKYR DIADAFGIEDAYTGDLEKVREEAVQAVHQLTVDLKNPTTISEVGATEADLAPLAHDAFND VCTPGNPRKATEEDILKIYTSLM >gi|197324944|gb|DS990230.1| GENE 378 435824 - 436723 1176 299 aa, chain - ## HITS:1 COG:Cgl0614 KEGG:ns NR:ns ## COG: Cgl0614 COG0463 # Protein_GI_number: 19551864 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Corynebacterium glutamicum # 4 253 9 250 251 77 27.0 2e-14 MLNVSIIIPAWNEEERIADCLMNATRQTVAPHEVIVVNNRSTDRTCDIVEQFQRDHPEAP VILLQQNEDQGLIPTRNFGLNAATGDVLGRIDADCMLKPDWVEVVSGIFTEDPDAMGATG PVVYYDMPAKGAGLAGDDHIRRHTYRADNDQVLLFGSNMAIRASAWHAISGEVCRDPEDV MHEDIDVSLHLLNHGFKTVYSQCMICGISARRMDTSFASFHRYMQRFKNTFAAHPDHWRE HHTERRLYALYPWLHMLYPIYQQHLAAKDINPAEKIWFDEQIKLVKSHFDNPEQVDAVE >gi|197324944|gb|DS990230.1| GENE 379 436777 - 438381 1470 534 aa, chain + ## HITS:1 COG:Cgl9099 KEGG:ns NR:ns ## COG: Cgl9099 COG0628 # Protein_GI_number: 19552249 # Func_class: R General function prediction only # Function: Predicted permease # Organism: Corynebacterium glutamicum # 26 365 55 396 490 104 27.0 5e-22 MSETDDQKLDLASVFPAKGDSRRPPDWWGRALLYTVIVVFAAIFVWTSWGKISTIVLDVV ISIFIALAVEPLVVSMVRHGWKRGLASAVSLIGLAVIVMALLTLFGNMFVQQLISMVKGL PSIYTEIVDAVKQYTSFDMPKIENLGMEIFKNVQTSWITDFAGQALTTTMGVFSFLLNLL TVLMVTYYISAAGPKMRRSLCQWLGPNTQRRFLLGWTVVQEQISGFLFSRSILAAINATC TAVFLEIIHVPYWLPLALFCGIVSQFVPTVGTYIGGALPVLFAWGSNGLWYGVGVLVFII VYQQIENLILSPKVSQRTMDLNPCVAFLAVLVMGALFGALGAFLALPVTASMQAIFKVYT KRYALVESPLMSDPVPGKKSKVVEGAEAFSERVIKPMSDHMPRAAKGSSAHVPISDELRA LRDQIYDLDEANETEDSETIAIPKDVLSRSVREGAKSGNAVKLRGVGDGTAQAHGDDGSS DGSAEPGAAKTSSDRPSDSESSGTAAKPAADRPAKTARPRRGDGSTDNPRSRWR >gi|197324944|gb|DS990230.1| GENE 380 438381 - 439604 1781 407 aa, chain + ## HITS:1 COG:CAC1691 KEGG:ns NR:ns ## COG: CAC1691 COG1215 # Protein_GI_number: 15894968 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases, probably involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 44 397 47 402 425 226 36.0 8e-59 MALLTVIDVLMMVVGGVGIIYQAICVIMSLFSKPVHFPDAPMDKRYAVLISARNEENVIG NLIDSLHNQTYPSKLIDIWLVADNCTDRTAEVVREMGCHVVERHDTELIGKGYALSYLLS TMIDSGVADDYDAYFVFDADNRLDRHYVEEMNKAFQSGFRILTSYRNSVNLADNWVSSGS ALWFIRESRFLNNSRMILGSSCHVGGTGFMFSREVMRRNRGWKFHLLTEDLEFTMDSILH GDRIGYCGTAMLYDEQPVTFQQSWRQRLRWSKGFLQVFRYYGMALIKRAVRERDFSSVDF TLLLCPFTVLGVIRIVLGLLFVAFGFVTWQSQLSAIAGWAFDIVLAVVTMMALAALTIVA ERDHIGATNKELFAYVLSFPIYMLSYMPISFQAIFSKAQWKPIVHKG >gi|197324944|gb|DS990230.1| GENE 381 439743 - 440672 1058 309 aa, chain + ## HITS:1 COG:Cgl1972 KEGG:ns NR:ns ## COG: Cgl1972 COG1131 # Protein_GI_number: 19553222 # Func_class: V Defense mechanisms # Function: ABC-type multidrug transport system, ATPase component # Organism: Corynebacterium glutamicum # 32 282 15 267 285 244 51.0 2e-64 MSIDNQPQIGGFPARTASSSVPSRPAVATLPPPDPRAAVSIRGLYKRFDRKIAVNGLSLD IPVGSFFGLVGPNGAGKTTTLNMVTGLLVPDAGTAMILGQDVWQDVNAAKREIGVMPQPD QIFDRLTGMQLLIYSGMLRGMKRDVAHSRAGDLLNAFDLVSAADTMVSDYSAGMTKKICL ASAMIHSPRILVLDEPFESVDPVSSANLKDILAEYASTGGTVIISSHVMSLVEKMCTHVA VINAGQVRAAGTIEQVSAGEDLEERFLQLVGGRHAAAKLSWLDGGYAANGVAPADSSAPT APFPSPEES >gi|197324944|gb|DS990230.1| GENE 382 440690 - 442327 1688 545 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1392 NR:ns ## KEGG: BBIF_1392 # Name: not_defined # Def: ABC-2 type transport system, permease protein # Organism: B.bifidum # Pathway: not_defined # 1 545 7 551 551 948 99.0 0 MVRLRWALTLATLRKSTWQTIGYVLGIVFGIGALVGVGALAWFLGGPVFDMAGHHIPAGW MYGVLHVAVMYGSTFAGFIILFIQLMLVGDGSTMAPRRFALYGIPDRKLQLGMLLGGLSG LPAICGTLALMLWSLAYRWMSVGMVVMQLIAAPLAIITMMSLAKLVISASTTLVRSKRGK NAFYLIAMIVFIVLCQLPNIIVNPADSGSLYDFPSLTDLSVADALSWTPFGAAFQLPYDL LTGNPLLFVARLAILAVTWVVCFVGCVWCLRHDRVTEGAPERAAKVRGIGAFGWMPDSTS GAMSARLLTYLRRDPRQILLFVMPVLFVALFALQSRGVTIVIWQGLIWGGWMMQMTEGNG LAYDGRGFTMEVLAGVRGWDDRRSRMRVFASINVIYMVVLGLACFVLTGDWRTADGLLLG VTFICLALGVSFSSIGVAEITNCSLMYPVPSMDKPFSTPQGRAVAQGLFPFVQLFGCLIP MLPTILVAIVLVVADMGGWLWVMAPIGLANGVAAMVIGSWLGGKLLDARAIRVVQTLDSF ASLQR >gi|197324944|gb|DS990230.1| GENE 383 442386 - 443849 2000 487 aa, chain + ## HITS:1 COG:ML0211 KEGG:ns NR:ns ## COG: ML0211 COG2027 # Protein_GI_number: 15827014 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) # Organism: Mycobacterium leprae # 124 466 108 438 461 92 31.0 2e-18 MASKAAARHHMIRHLPMTRRTVTVAVSAVVAVAVMAGYFVADIYDVAPGILTLRGVDRVA IPDPQDALTGGTVAAGVDASMPVDAQGAKTILDEFSASEGVGKSFSLAIADGKGNIVAEH DATIPRQPASTLKTLTAFAAATTLDMGSTLDTKTYLIQGDDDRKTVVLQGEGDMLLSDGE SDPSHINGHAGLGTLAQRTAEALKQRGITQVDLLYDDSLFGQDRTPAGVTENNAEHRYYT AISTMAVDGGRTWTDMVKPANPDDSSQYPVLSQQPALDAATTFAKRLADNGITVTSGPTA GAAPSGTSALASVSSAPLNKVMAFMLRHSDNTLAQLFGRLTALKRQAGNSIKTDTQAVAD TLTEQGIDTSGLQMADCSGLTPGSKVSVTTLIEVQERNLTAGIATAAAEGLSIPGLVGTA RNRIVTGPDNGLFRVKTGSLDAVTSLAGNVSRVKGGVLSFAVIVNDPENQWSAIAAINVM AAKLAKL >gi|197324944|gb|DS990230.1| GENE 384 443862 - 444980 623 372 aa, chain + ## HITS:1 COG:Cgl2642 KEGG:ns NR:ns ## COG: Cgl2642 COG0037 # Protein_GI_number: 19553892 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: Predicted ATPase of the PP-loop superfamily implicated in cell cycle control # Organism: Corynebacterium glutamicum # 14 362 1 305 314 105 33.0 1e-22 MPYTAVMRAAIGRMRAMLVDLGLPRQDPRFAEHGDHTPAPDAPLVLVACSGGRDSMALAA VAGIVCASWGIRCGAVVVDHRLQEHSDEVAQSAARRCCGLGLDPVTVVPVEVSGDGHGVE AAARDARYRALADTARRESAACVLLAHTGDDQAETVLMDVLRSSGLDSLAGMPRIVERDG VRFARPFLRLTRADTTGICEDLGITWWDDPTNGDHMAADEPLPDDFPLRSRVRHTLIPYL NAFAGGDIVSRFCDGAELASIEKSYLDGIAESVAAHAVTFAGDSCGSVDGDCELLRIDAK ALAREPRAIRLRVIAHALAAVGIEAGFRHVDAVDRLISQWHGQGAVALPSGHSAFRRKHV IRVCQDGLHANR >gi|197324944|gb|DS990230.1| GENE 385 444967 - 445524 550 185 aa, chain + ## HITS:1 COG:CAC3203 KEGG:ns NR:ns ## COG: CAC3203 COG0634 # Protein_GI_number: 15896450 # Func_class: F Nucleotide transport and metabolism # Function: Hypoxanthine-guanine phosphoribosyltransferase # Organism: Clostridium acetobutylicum # 6 183 1 178 178 170 44.0 1e-42 MQIADVQDEIDHELITKAQIASKIHEVAAQVSKDYQGRDLLLVAVLKGAVNTIAAFSQAL SIPVQMDFMSLSSYGSGTESSGTIAIRQDLSCDVRGRHILIVEDIVDSGRTLAWLVEELK RRGAASVEIFALLEKPSRREVDVDVRYRGYEIPDEFVVGFGLDYDERFRNLDSIAVLKPE VYQGE >gi|197324944|gb|DS990230.1| GENE 386 445531 - 447624 1202 697 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|157803230|ref|YP_001491779.1| 50S ribosomal protein L9 [Rickettsia canadensis str. McKiel] # 159 650 98 590 636 467 51 1e-130 MSYPQGPQQMPPSGNGNRGNGNPFKRNSPNDPNGNQKGNNSGGPQPFWKSPWLWGVLLVV MAVAGFQLFAGAGTQTIDTKDGFALLKTENVAYAKIIDNKQLVQLELKSNFTKTDPDTNK PHNYGKKVQFYYTFAQGAQVVQAVEKADPSKGWTSNMQQTSMVSYLISSILPFIIMIAVF WFLMSRMGGASGMFGMGGKKNNGKLLEGQTPSTKFSDVAGEDSAVQEVEEIKDFLKDPSK YKALGARIPRGVLLYGPPGTGKTLLARAIAGEAGVPFYAMAGSDFVEMFVGLGASRVRDL FDEAKKNAPAIIFIDEIDAVGRKRGSGMSGGHDEREQTLNQLLVEMDGFDSDTNLIIIAA TNRPDVLDPALLRPGRFDRQVSVEAPDLEGREAILKVHAKGKPFVPDVDLHMVAVRTPGF TGADLANVLNEAALLCARAGAQLIDNRAIDEAIDRVQAGPKRQSKGMALNELRNTAYHEG GHALVAAALHNTDPVTKVTILPRGRALGYTAVMPTTDRYSQSRNELLDQMAYAMGGRTAE EVVFHDPTTGASNDIEKATKIARTMVVEYGFSSKLGAIKWADTDDQSADFDGLAPHKYSE RTAEVIDEEVLGLVETAHTEAWNIINDNRDVLDELVRQLLVKETLNEKELAAIFANIRKA PERPVWLSDQRRPDSDKPPVEIPESLKRSVGMKPGER >gi|197324944|gb|DS990230.1| GENE 387 447765 - 448331 728 188 aa, chain + ## HITS:1 COG:ML0223 KEGG:ns NR:ns ## COG: ML0223 COG0302 # Protein_GI_number: 15827020 # Func_class: H Coenzyme transport and metabolism # Function: GTP cyclohydrolase I # Organism: Mycobacterium leprae # 4 187 20 205 205 217 58.0 1e-56 MAIDEEGVRKAVRLFLTSIGENPDREGLLETPDRIARACEEIFSGLGRSPQEVLSKRFPV ETDEMVLVRDIELFSVCEHHLLPFHGVAHVGYIPSNGQVVGLSKLARLVELYARRPQVQE RITQQVADALMEYADAKGVIVVTECEHMCMAMRGVNKPASRTITSAVRGVMRTPATRAEA MSLIMAKH >gi|197324944|gb|DS990230.1| GENE 388 448397 - 449269 1045 290 aa, chain + ## HITS:1 COG:ML0224 KEGG:ns NR:ns ## COG: ML0224 COG0294 # Protein_GI_number: 15827021 # Func_class: H Coenzyme transport and metabolism # Function: Dihydropteroate synthase and related enzymes # Organism: Mycobacterium leprae # 15 285 8 270 284 210 46.0 3e-54 MTELQRLHDTDCTLLMGVLNITEDSFSDGGLWLDPGKARDHGDDMLHAGADIIDIGAEST RPGAKRVSEKDELDRVTGAAKALIAHGAVVSIDTTRSAVAQAALDEGAQIINDVSGGRLD RDLPHVVADHDCLYIVQHWRGWLAGSKGGAAPDADTSHYEHDVLKDVYDELMSQVDAVLK ARVAPERIIIDPGLGFSKPGIEHNLPLLVGLDMFKRSGYPVLIGASRKRFVSAALNDAGI GEPTMDDRDNATAALSALCAEHGAWAVRVHDVRRSRAALTIGSLWRQYQN >gi|197324944|gb|DS990230.1| GENE 389 449352 - 450866 873 504 aa, chain + ## HITS:1 COG:DR0170 KEGG:ns NR:ns ## COG: DR0170 COG0801 # Protein_GI_number: 15805207 # Func_class: H Coenzyme transport and metabolism # Function: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase # Organism: Deinococcus radiodurans # 139 284 1 142 171 112 50.0 2e-24 MDTIRLTGVQGMGTHGVLDYEHQRAQPFIVDAVLHLDLSRAGSSDDLHDTVDYGRVAKRI VSVIEGEHVDLIERLAALIADAVIADHPAVQGVTVTVHKPKAPITVPFADVSVTIERWRS GRNTDGKTGRADEGRVTPMHHAVIALGGNKGDVAASMRSAIADIDGLEGTQVTGISPLYR TAAWGMPDGTPDFLNAVIEVTTELDAASLLGRLQHIEVAHGRTREQHWASRTLDLDIIDV DGLVSEDPNVTLPHPRAWQRAFVLAPWLALDPAARLAGPHGGEIADLLHEAGDREDVHRI DDSWMTGMADDAPVQPSGSAADIPQFDGTVDGSARKPGDGDTATVQPAIHTAVISMDSRS NEAETLFRTAIVALEGIPGDQVEGISPLYHVSHLHGSDAMSAVMQMTCRMDAKALIATLG SVEESLNGDVDLDLVDMPGTVCDEPDCRVPWPSARTHASVLAPWMDMDPQARLGGDPVSY LLAMAPDADRVGLLSDTWIVGSTE >gi|197324944|gb|DS990230.1| GENE 390 450863 - 451402 749 179 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1384 NR:ns ## KEGG: BBIF_1384 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 179 1 179 179 304 100.0 1e-81 MKIRRTPWWQYVVALLLGLIAGCLLVQVSESSGLSLLGAPWFVSVVLLLLGIVVLVMALQ VHQYATTDPQKRARLKPLDPTKAVYTLMLSKALGLTGAALAGWYVGQILLVLDHIEADYY ATAVTQCAVAAVICLADMVIGIVGEWLCQLPPMEGPENPKMKAAKRRRGIASATAKTRH >gi|197324944|gb|DS990230.1| GENE 391 451909 - 452814 959 301 aa, chain - ## HITS:1 COG:AGc4997 KEGG:ns NR:ns ## COG: AGc4997 COG1946 # Protein_GI_number: 15890005 # Func_class: I Lipid transport and metabolism # Function: Acyl-CoA thioesterase # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 297 23 311 316 176 37.0 6e-44 MTHEDGTTPLNHLVKVLRLGDPSEYRGHTYISGESLYFPTGRVYGGQVIAQSLIAASKTV SPSRLPHSVHGYFIAAGDIRQDLLFDVETLRDGRSFSARRVNVTQSEGPILTAIASFQEQ GQSGVEFSDTMPQDVPAPETLTSAKELMEPYADKSPFAKFYAKKSPFDIRHVTPTIMLGA DKDSAAHDSGKQLVWMKADGVVDVPQVMHRAMLALGCDQVMMEPVLRRAGLSISTPGISY ASIDHSMWWYRDVDINQWHLYVQDTPTAAHGRGLGVAKVYTQDGELVAAMAQEAMIRVPQ Q >gi|197324944|gb|DS990230.1| GENE 392 453197 - 456523 4656 1108 aa, chain + ## HITS:1 COG:L126168 KEGG:ns NR:ns ## COG: L126168 COG3525 # Protein_GI_number: 15673476 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Lactococcus lactis # 235 477 57 305 325 109 27.0 3e-23 MEKSSNRRFGVRTVAAIVAGLMVGGMCTAMTASAADDSAAGYSATAPVNLTRPATVPSMD GWTDGTGAWTLGEGTRVVSSDALAARAQSLASELTKFTDVDIKAATGSATGKDISLTLDA SKKAELGDEGFKLNIGSKGLEVIGATDIGVFYGTRSVSQMLRQGQLTLPAGTVATKPKYK ERGATLCACQINISTDWIDRFLSDMADLRLNYVLLEMKLKPEESNTKKAATWSYYTRDDV KKFVKKANSYGIDVIPEINSPGHMNVWLENYPEYQLADNSGRKDPNKLDISNPEAVKFYK TLIDEYDGVFTTKYWHMGADEYMIGTSFDNYSKLKTFAEKQYGAGATPNDAFTGFINDID KYVKAKGKQLRIWNDGIVNTKNVSLNKDIVIEYWYGAGRKPQELVQDGYTLMNATQALYW SRSAQVYKVNAARLYNNNWNVGTFDGGRQIDKNYDKLTGAKVSIWPDSSIYQTENEVEKE IFDGMRFISQMTWSDSRPWATWNDMKADIDKIGYPLDIREYDYTPVDAGIYDIPQLKSIS KGPWELITTPDGYYQMKDTVSGKCLALFTGSKHLDVVTQVGATPELRNCADVSVGQDQRD TANERNTQKWQIRADKDGKYTISPALTQQRLAIATGNEQNIDLETHRPAAGIVAQFPADL VSDNALFTLTGHMGMSATVDSKTVNPASPSKITVKVRAASNANTGDVTVTPVVPEGWEIK PGSVSLKSIPAGKAAIAYFNVVNTTGTGDATVQFKLTNTKTGEELGTTSVALTGSLTKDV EASDYAASSQETTGEHAPVGNAFDKNANTFWHSKYSNPSANLPHWLAFKASPGEGNKIAA ITHLYRQDKLNGPAKNVAVYVVAASDANSVADVTNWGEPVATAEFPYTKELQTIALPNTI PSGDVYVKFQINDAWGLTETSAGVTWAAVAELAATAKATPVELTEPEQPKDNPEVTETPE ATGVTVSGDGVANGALSLKKGTTAQLTAKVAPDDADQAVTWASSDDKVVTVDKTGKVTAV AKGVAKVTATTANGKSASVTVTVTEDSEVPGPTGPTEPTKPGTEKPTTKPNDGKLSATGA DTAVLATIAALFALAGGAVVAVRRRSVR >gi|197324944|gb|DS990230.1| GENE 393 456725 - 458404 2793 559 aa, chain - ## HITS:1 COG:MT2552 KEGG:ns NR:ns ## COG: MT2552 COG0488 # Protein_GI_number: 15842003 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Mycobacterium tuberculosis CDC1551 # 1 558 1 557 558 796 71.0 0 MAEFVYQMIKARKAYGDRVILDDVTLSFLPGAKIGVVGPNGMGKSTLLKIMAGLETVSNG EAYITPGFTVGILQQEPPLDDTKTVGENIKMAFGPIAEKVARFNAIGEEMANPDADFDAL MDEMGKLQTEIDAANGWDLDSQLEQAMDALQCPDMDTPVSVCSGGERRRVALCKLLLEAP DLLLLDEPTNHLDAESILWLEQFLHQYKGAVIAVTHDRYFMDNVAEWICEVDRGHLYPYK GNYSTYLETKAKRLEIQGAKDAKLAKRLKNELEWVRSSPKARQAKNKARLERYDQMENEA RNNKKLDFSEIQIPAGPRLGSVVLEAEHLHKAFGDRVLIDDLSFTLPRNGIVGVIGPNGV GKSTLFKTIVGLEPLTSGELKIGDTVKISYVDQNREGLDPNKNLWEAVSGGLDFIEVAGV EVPTRAYVASFGFKGSDQQKLTGVLSGGERNRLNLALTLKQGGNLLLLDEPTNDLDVETL ESLENALLGFPGCAVVISHDRWFLDRIATHILAWEGDDENPAKWYWFEGNFQAYQENRVA RLGEDAARPHRLHKKLTRV >gi|197324944|gb|DS990230.1| GENE 394 458380 - 458559 56 59 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDRNGRGDTETTGRMTRMTAVRDTPRNRLCHYRIRVPQNVGTSTFSEWLGIIWQNSYIR >gi|197324944|gb|DS990230.1| GENE 395 458887 - 459321 139 144 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1379 NR:ns ## KEGG: BBIF_1379 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 75 140 1 67 384 127 92.0 1e-28 MVLYRGAAYHRHHPDREGALKCEYHRGYWIPICSTGVSDDELTAGSYDSIYGFHGDKEYK GVFNDNDLSTDGSKVAFKASGQWFARWDEDSWNGKASGSFDFPLIGLTPNTAYTNNAKGS DFPSYPYQEVVQDTSNELLRMACM >gi|197324944|gb|DS990230.1| GENE 396 459312 - 460259 872 315 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1379 NR:ns ## KEGG: BBIF_1379 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 315 70 384 384 511 96.0 1e-143 MHVKTPVDIRQVALYAQPIYKDSNTKVSHWVEDNENALKFVPDFTTKSVAAAKPAETLPD KTDVKAEVAGGKVEPGKTARVYIDNLKDEAKGKADANSLFWYAYIYSTPQALTGPGGAPF VTVKKEEKTGKYYFDALIPSNLPDGEHKISVQDENGTAQAWTPVTVGDTSPTPTPVDKSK LNTAVGDAAKLAEKDYTKDSWAPFAKALADAKTVAGKQDASQADVDAAVKALADAQSGLK KAETVPSKPSKPDNGDNDKPSDSNKPVATRSSASDKKADSKNDGKKQGLAKTGVDVRSWP VRWSPWPCWVPVLQR >gi|197324944|gb|DS990230.1| GENE 397 460410 - 461087 878 225 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1378 NR:ns ## KEGG: BBIF_1378 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 225 1 225 225 437 100.0 1e-121 MRELSIMVDESGEWGKLSKYYLITLVFHDQSEPVMPHIERYEQHLADASLPDIPFHAGPL LNGHADYETLSMADRKRLFVAFFTLARNLPFTYVTFAHRKSEFDNDKRRFEAQLRRDLAN YLLTHLDRFQSYDTIKIYYDNGQQVVTNALKASIGYALSKEAVIYRKADPKDYRLEQAAD LMCAIELTALKFKAGENTETDHKMFGDWRSFKQNYLKALRRKQAK >gi|197324944|gb|DS990230.1| GENE 398 461178 - 461477 157 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIMQFTAFGTDDTRHMSWPAAPLIHVNTVSINAYLSHSATGTAYSTDQSPNQRRNRNKLQ SKSETSSFHPRPETIVGPPVTITASLEPRERIDIVTQDQ >gi|197324944|gb|DS990230.1| GENE 399 461966 - 462613 973 215 aa, chain - ## HITS:1 COG:SP0860 KEGG:ns NR:ns ## COG: SP0860 COG2039 # Protein_GI_number: 15900744 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) # Organism: Streptococcus pneumoniae TIGR4 # 3 215 2 214 214 241 56.0 6e-64 MSKILVTGFDPFGGEPVNPAFEAVKLLPESIAGVSVVKLEIPTVFTRSAMVVEEAIEREK PDYVLCIGQAGGRSAVTVEKVAINLAEARIPDNDGEQPFDTPLREDGDTAYFATLPVKAM VKRINASGIPALMSYTAGTYVCNSIMYNVLYLLDRRFPGVKGGFIHVPYATAQGVGKPNG TPTMEITTMAKAIEAAIEAAVSVEEDATDIMGETH >gi|197324944|gb|DS990230.1| GENE 400 462654 - 462926 402 90 aa, chain - ## HITS:1 COG:SP0859 KEGG:ns NR:ns ## COG: SP0859 COG3817 # Protein_GI_number: 15900743 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Streptococcus pneumoniae TIGR4 # 1 86 217 302 307 96 62.0 1e-20 MGNAFAAITVMTVGIGAPFVLAYGADPAAIGILALTCGHCGTLCTPMAANFNIVPVAMLD MKDRMGVIKKQVLPAMVMIVVQIVYMLIAQ >gi|197324944|gb|DS990230.1| GENE 401 463102 - 463293 136 63 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313140994|ref|ZP_07803187.1| ## NR: gi|313140994|ref|ZP_07803187.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 13 63 13 63 63 86 100.0 8e-16 MAAASSAANDANVMPKFIPVFPTSHRLLDDALRPVTIPRNLRPYHLRRQPSTTVSSPGMC DAL >gi|197324944|gb|DS990230.1| GENE 402 463320 - 463730 232 136 aa, chain + ## HITS:1 COG:L171552 KEGG:ns NR:ns ## COG: L171552 COG1434 # Protein_GI_number: 15672559 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Lactococcus lactis # 2 114 204 309 310 85 41.0 3e-17 MFVASGGQGSDEVVSEAESMRRYLTESRHVPADAVLMEDRSTTTMENLRFSKEIMDARSG VQSVPGRRGLAYRCALVTSDYHVFRASEYAHHIGPKADGVRQPYAWLLLAHGVHPGVHSR YQGAFVAVLCARPAGH >gi|197324944|gb|DS990230.1| GENE 403 464027 - 464650 631 207 aa, chain + ## HITS:1 COG:FN0030 KEGG:ns NR:ns ## COG: FN0030 COG3467 # Protein_GI_number: 19703382 # Func_class: R General function prediction only # Function: Predicted flavin-nucleotide-binding protein # Organism: Fusobacterium nucleatum # 25 192 1 157 158 100 34.0 1e-21 MTGLDEARPTRRNDERTVAGRHRMMRRADREVTDCEQIEGIVAACRIVHVGYADAEGLTI VPLNFGYEWQQDGDAGTGDELAGLTLYIHSASIGRKLDAIRAAGNALDVAFSMETDCEVI AGRTPCNWGEAFKSVIGNGVASMIDDLDECRKGLRLLMGQQAGMPDIEFTDQQVRSVTVW KIEVRHLTAKIHAKPEPRNARRQAAGE >gi|197324944|gb|DS990230.1| GENE 404 464927 - 465769 818 280 aa, chain - ## HITS:1 COG:CAC2917 KEGG:ns NR:ns ## COG: CAC2917 COG0657 # Protein_GI_number: 15896170 # Func_class: I Lipid transport and metabolism # Function: Esterase/lipase # Organism: Clostridium acetobutylicum # 24 277 18 270 272 240 46.0 2e-63 MQHFTQVIDGIDSSQAELVGYVIDNSPEMDPDRRRPAILIIPGGGYAIGSDRESEPVALQ FLAAGYQAFVLKYSCVPSRYPVALLEMAEAMSMIRGHADEWHVDAGRVAAIGFSAGGHLA ANLTTVSSDAELRDAGYDPAAVRPDALLLCYPVITSGRFAHRGSFDNLLGDGKDDASLLE LLSIEKHVDATMPPVFIWHTITDQAVPVENSLLMIQACRDAGVSIEAHLFPQGGHGLSLA TVDTARAGSPGEGDLNNVVPAVQIWPRLAFDWLRRTFDVR >gi|197324944|gb|DS990230.1| GENE 405 466064 - 466411 488 115 aa, chain + ## HITS:1 COG:BS_lmrB KEGG:ns NR:ns ## COG: BS_lmrB COG0477 # Protein_GI_number: 16077336 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 41 111 18 88 479 69 40.0 1e-12 MLSAIQTTSKETTLQEHAAAEHGSAHDIPAESPKFRHPHKVMLGLYIGAFLGMLSETSMN IALPDLVDEFSVSSGTAQWMVVGYMLAIGVALPYVGFLLKWVKAKTLVMVASTDR >gi|197324944|gb|DS990230.1| GENE 406 466397 - 467989 1176 530 aa, chain - ## HITS:1 COG:BS_expZ KEGG:ns NR:ns ## COG: BS_expZ COG0488 # Protein_GI_number: 16077628 # Func_class: R General function prediction only # Function: ATPase components of ABC transporters with duplicated ATPase domains # Organism: Bacillus subtilis # 1 508 1 467 547 124 26.0 4e-28 MIPALTLTNIVFTYPGTSEPLLDGIDVTFARGWTAVLGDNGIGKTTLAKLAIGRLSPDAG RISPTPNRLHTGYCPQNTDETPENLEDFACDWSPQAMEIRRELGIGDDWPWRPGTLSGGE AKRLQIACALATDPDVLVLDEPTNHVDRPTRERIIAALRSYDGIGILVSHDVALIDAVAS SCALFERDHVRGHNITVVRVRPGNYSAASMDAQRERAAAAGMARNARRESTRIDAVKEQR RRAATSEIAGAAKAHRLVNPKDHDARSRIKKNHNPSRLGPASARIDAQATAARERAAAVV TATKRYDGDIWMDAESSNRRELVRLEPQIIPYAPQSPDGVGAAAISETAGLKIPMLTVGP HDRIGISGPNGTGKTTLVRTLLRTIAMREQYSGIPLPRLTITQNTTDQDAREAMRRLTAL TPTDRGDVLSAFAQLNVDPSRLLAGGNPSPGELRKLLLCLGLRDHPHLIVMDEPTNHLDL HSIQALAHALAGYPGALLLVSHDEGFLECAASIRWTLHSDALGGAQLTVS >gi|197324944|gb|DS990230.1| GENE 407 468166 - 468375 63 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQFYSRPGKILHDTTRKLPNHQQRSSIAVSSLATPSGPAASQHVVVLLLFILGGIPICQE SRVAKVVPF >gi|197324944|gb|DS990230.1| GENE 408 468374 - 468562 79 62 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MGGPITDLSSIRYPLFQAMRQVGYFMPRTGKNPCFRHFVAFPTANAHCLRVSAVVGQGKR DL >gi|197324944|gb|DS990230.1| GENE 409 468987 - 469937 395 316 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|163762640|ref|ZP_02169704.1| ribosomal protein L33 [Bacillus selenitireducens MLS10] # 6 314 8 313 323 156 33 1e-36 MTTLAIDIGGTKIAAAVCDENDAITHRWRVPTPMDADAINHHIANIYHEAVAAGHDDIQA IGISAAGNVGADRRTLTFAANIPAWINYDLSEHIGALIDHAVPVVVENDANCAGWGEYVH GAGQGSSNMVALTVGTGLGGAIVIDGRLYRGSFGMAAELGHLPMVPDGDTCGCGLRGCAE RYTSGSALERFAKSAVRRRPQDAERLMELCGGDVDKLEGPMVSQAAQEGDVLGLYAFGKI GEWLGRAMAATAAVLDPDVFVIGGGVVAVGDILLEPARYNYQRFLEGSAYRGHASIVAAT AGQDAGLIGAANLALR >gi|197324944|gb|DS990230.1| GENE 410 470105 - 470323 106 72 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313141002|ref|ZP_07803195.1| ## NR: gi|313141002|ref|ZP_07803195.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 1 72 1 72 72 110 100.0 3e-23 MCSLCPFLDFRYPDAAGCAADGLRPRDRAGRQLGYRRSASSCISANARRSVRTVMSHSRA VPADCPLGSLSR >gi|197324944|gb|DS990230.1| GENE 411 470314 - 470793 447 159 aa, chain + ## HITS:1 COG:BS_yhcA KEGG:ns NR:ns ## COG: BS_yhcA COG0477 # Protein_GI_number: 16077966 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus subtilis # 12 126 4 119 532 78 39.0 6e-15 MSTSTARLPHGGKEPVATKLVAVVVSLAILTFLGILSETSLNIAYSTLMEEFSISASVVQ WLTTGYLLLLSVSIPSSPFMVRKFATKTLFIMAIAIFTAGTVLGALALLPGAVLGAVSAT VVGGMLNCHSVPDHCGSAAAGRVACHMAGGSPDQRPAHR >gi|197324944|gb|DS990230.1| GENE 412 470717 - 471034 329 105 aa, chain + ## HITS:1 COG:TM0313 KEGG:ns NR:ns ## COG: TM0313 COG0667 # Protein_GI_number: 15643082 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Thermotoga maritima # 5 94 221 316 319 64 39.0 5e-11 MVQPLPAGSRATWQADHQINDLLTDENLDMVERLRGVADELGTNLPVLSMAWILQHPEIS CVIAGASKPGQLENNLKASGFQIPADAMAGIDRITGFHRFERHVG >gi|197324944|gb|DS990230.1| GENE 413 471139 - 472416 1778 425 aa, chain - ## HITS:1 COG:PM0738 KEGG:ns NR:ns ## COG: PM0738 COG2873 # Protein_GI_number: 15602603 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pasteurella multocida # 6 423 5 420 422 493 55.0 1e-139 MTHIDTTCVQGGYQPGNGESRTPPIIQATTFKYTSSEQMSRLFDLSESGYFYTRLQNPTN DTVAAKICELEGGAAAMLTSSGQAANFFALFNICNAGDHIVASSAIYGGTFNLINVTMRK MGIECTFVSPDCTPEELDAAFRPNTKAVFGESISNPALIVLDFDKFTAAAHDHGVPIIVD NTFPTPVNCRPFDYGVDIVTHATTKYMDGHGSCVGGAIVDSGRFDWMAHADKFPGLTTPD DSYHGVTYATDFGPAAYIIKATAQLMRDFGSTPAPINSWIMGMHLESLAVRMERHCANAL AVARFLEADPRISWVSYPGLEGDRNHALAAKYMPNGTCGVISFGVPGGRDTVSSLLDHFR MISIATHVADARSCTLYPAGTTHRQLTEEQLEEAGVGIDLVRLSCGIENADDIIADLRQA MDAVL >gi|197324944|gb|DS990230.1| GENE 414 472556 - 473695 1118 379 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1410 NR:ns ## KEGG: BBPR_1410 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 8 379 1 372 372 712 99.0 0 MASREAAMGNIIDDIRANEDTFADRPFNEVDSLALAQLSYARMPVNVPRLDAEATDVDLA MVGVRDLLRAECYDDMFGKVWSPSMNVDLLRAMCESPRWRDLRVGGYVDEFDPETTKQFS ACVFDVGDGSSYVAFRGTDSTIVGWKEDFAMAFRRPVAAQESAARYLADIAGLRDGPLMV GGHSKGGNLAVYAAANAPAAVQERLIAVFCHDGPGFDADFFDTPGYARVAPLVDKSVPES SIVGMLFEMREHVEDGYTIVSSDGASIMQHFALNWQVERGEFVHAGGLSASSRYLARTIN GWMAKFDDEHRRRFIENLFAVLEAGGYDTFGELTSHWTQSLPVMLAAVRGIDAEDRDVMA DVLKGFAATAATSVIATKQ >gi|197324944|gb|DS990230.1| GENE 415 473751 - 473942 185 63 aa, chain + ## HITS:1 COG:no KEGG:BLLJ_1311 NR:ns ## KEGG: BLLJ_1311 # Name: not_defined # Def: transposase # Organism: B.longum_longum_JCM1217 # Pathway: not_defined # 21 63 107 149 149 80 86.0 2e-14 MRGAGCAVLKDPDRLTAGQSEAFSNRIKVTVRMAYGFHRVTNLIALVMPRCGGLDIRLPQ PAI >gi|197324944|gb|DS990230.1| GENE 416 473939 - 474217 176 92 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MRDAVARWPALQRSECSGLPARRRARQGRRMIGHAQLPVPQRPREMVRAQTITFRRIMAS RDIAGTFRHNSPLPPPPWITVIFSEASDVFVG >gi|197324944|gb|DS990230.1| GENE 417 474124 - 474297 58 57 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDIPTQGEYVKAARPAAARQHSGHESRCATRSHDGPRYSDPSAQASPRGAAPDKDAA >gi|197324944|gb|DS990230.1| GENE 418 474300 - 475181 939 293 aa, chain + ## HITS:1 COG:Cgl2018 KEGG:ns NR:ns ## COG: Cgl2018 COG0730 # Protein_GI_number: 19553268 # Func_class: R General function prediction only # Function: Predicted permeases # Organism: Corynebacterium glutamicum # 20 285 14 264 269 95 28.0 8e-20 MRGVDAVVIAGFSLMTMLLILLAGIGAGFVGYAVGASSLVSYPALLALGIPPVLANASNT VGVIGTGIGGVLGARKELRGQRLRSITYVSIGAVGGVAGAALLLSLDPKIFEFAVPPLIL FSSLIIAVNPRGRMQARQAAADVMAQARSLTTPQGQGSDGAPASALASTQPMSKDPWWIW LGVAFVAVYSGYFGAGAGTCALAVLDAGKIGPFHQINALKTLIGTGANISASVIFIVRGV VDWPAAILLCIGCFIGGYIASPVTRRIPARIMRIAAVLAGIVLTVDLAMKTYL >gi|197324944|gb|DS990230.1| GENE 419 475306 - 476178 1050 290 aa, chain + ## HITS:1 COG:BS_yclI KEGG:ns NR:ns ## COG: BS_yclI COG0577 # Protein_GI_number: 16077442 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, permease component # Organism: Bacillus subtilis # 1 261 147 398 486 107 30.0 3e-23 MTSGDFTLTGFSSDTAIANAANGTFTMSSGEVFGYGESDNGKVIISKALADFNDLKVGDE ITVTNPSDTSTTYTFTISGIYKNSTSSNTSAMGPMGGTSQDADNAIYTSVSTLKSLGLDA DTTANDDDNNITTQLSYTYVLGSADDYETFASDVRQAGLDDTYTVQSADVENHESSLVPL DSLAKFALTLLIVVLAVGAVVLNLFNIRERKYEVGVLTAIGVKKVKVAAQFAIELLIVTM CGIALGVAGGAVASVPVSNQLRLLAGDPDRQPGGAVRSRRRHGRRSRQQL >gi|197324944|gb|DS990230.1| GENE 420 476320 - 476418 84 32 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MALAHEEGKCVTSPEVAAASDEVYQLAKLRRR >gi|197324944|gb|DS990230.1| GENE 421 476614 - 477528 1169 304 aa, chain - ## HITS:1 COG:AF0788 KEGG:ns NR:ns ## COG: AF0788 COG0697 # Protein_GI_number: 11498394 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Archaeoglobus fulgidus # 14 291 47 308 308 108 29.0 2e-23 MKKGLSPTTGRVMLLCCAMLWGGSYPIAKVAMGVVTPQWLMGLRLVGASTIMLILFRKRI VPYLNKSIIIPGLVTGLTYWGTMISQTVGLTMIEPGRSAFLTSAYCVLVPFVSWLLMRQR PAARNIVAAALCLTGVGFVSLGSGLGGLTIGTGDLLTLLCAVIFSFNLVCLGKWSRVIDP VALTFAQFVTAGVCFIVGASFSEPAPNASWLAPGVLACLVYLFLGATMLAQIMQNVGLKV TPPSQASIIMCLETVFSMVFSVLFYGETVSGAAATGFALIFLAILVSQIRLNGRLLERVG RKAR >gi|197324944|gb|DS990230.1| GENE 422 477774 - 479768 2360 664 aa, chain + ## HITS:1 COG:Cgl1415 KEGG:ns NR:ns ## COG: Cgl1415 COG0513 # Protein_GI_number: 19552665 # Func_class: L Replication, recombination and repair; K Transcription; J Translation, ribosomal structure and biogenesis # Function: Superfamily II DNA and RNA helicases # Organism: Corynebacterium glutamicum # 31 504 3 445 448 300 42.0 9e-81 MHTDTDTVDIDDIDAALDASADDKEQDAAPTFAELGVPKPLVHVLAMDGKVTAFPIQADT LADSLNGVDLLGRGQTGSGKTLAFAIPLVARLSEHSVTEVAMKEFEQIRKASDEKAAREQ ASLPRPRGLVLAPTRELVNQIDEVIQPLAEAYGMSTVTVYGGVSYARQVAGLRAGADIVV ACPGRLEDLLRQGKLSLDAVEITILDEADEMADMGFLPPVTRLLEQTDSRGQRMLFSATL DHGVDALVKRFLPDAKVHAVSSVVSQVDTMTHHVFEVSQGNKHEVIRLLASGTGKRILFT RTKFQAKKMAKKLIDEGIPAVDLQGNLSQKQRDRNLLAFEKGLVRVLVATDVAARGIDVH DVTLVVQTDPPADPKSFLHRSGRTARAGEQGDVVTLVLPNQARSTRQMMKRAGIRVKSVA ITPASEDLTELVGEHAPVVEGWSLDKALEALRRSERAGRSDRKGGRGGEARGGRGRSGRK SRARGGEHDFSRPSARRDGHRHDGAEMEGRESAQYRFDHRDESQMSIIGEGKPHGKRKHT TKRDRFDGYGRSGFDDGRFDDRRQYRDAEGRKGDKKRRGNDFGDDFNTPFDGREADRRSN RRNGRFHDTSFEDRKGGSHNNDGDNRRDGRNRRSQSGPNRATRKAAGFRKSHGKRNAAPF RRGR >gi|197324944|gb|DS990230.1| GENE 423 479974 - 481086 1025 370 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1359 NR:ns ## KEGG: BBIF_1359 # Name: ampC # Def: beta-lactamase class A # Organism: B.bifidum # Pathway: not_defined # 1 370 1 370 370 657 99.0 0 MAKHMRPPRRRTGRILRGIVTHAGGRVGPRRRANPPGGRIISTRELTYVRRRLTVLIAMF SVVTMVVLLSVRGCSNDGDGSSGSVSSAGAARSGATVDPTDGSAADDGSSDESFSDKSGS GRVRSQSASRSMFKAAMPAPAQPERDLTAQASAALAGVFSGARYSVSVVDLSNAGTLVDI DSSQVFASASTYKLFVAHSMVTAVELGEMTWDSPLNGMTLQQCLTTMIVDSDNECPKAWL MRDNGAGYDKVTQQANALGAKNTTLHYLDVRTTSADLALILTKLYRGEIWNDDDRDMVIG LMKRQQYRSGIPAGIGGNGTVADKVGFRDSYLHDAGIVYSGKGDYAFVIMTSGSSWTAIA NASAALYQLL >gi|197324944|gb|DS990230.1| GENE 424 481153 - 482019 1067 288 aa, chain - ## HITS:1 COG:VC2001 KEGG:ns NR:ns ## COG: VC2001 COG0676 # Protein_GI_number: 15642003 # Func_class: G Carbohydrate transport and metabolism # Function: Uncharacterized enzymes related to aldose 1-epimerase # Organism: Vibrio cholerae # 7 286 26 294 296 125 32.0 7e-29 MITTFTIRNVANEDGAAQISDFGAHVLSWTPAGGHPAVWQPKAVYLGKPIRGGVPVVLPW FALGFEHGEIAGKKPKHGFARTTVWHVDEDATDDRRIRYTLSDADATPELLAQLHSGASP RFHAVYDIEVGKELTMTLTITNDGTEPLRYETALHTHFHVGDLTQVSLHGLEGSDYLDAT VAGYPPRVQPDEPVTFDGTTVDRIYYSTDTLRLDDPAWDRVIVIEAHGTKQTVTWNPGTA ADTEIGDMQPGEWRDFVAIEAAACREYAIELAPGESHALTQRISVENR >gi|197324944|gb|DS990230.1| GENE 425 482210 - 482722 202 170 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148360238|ref|YP_001251445.1| nucleotidyltransferase PLUS glutamate rich protein GrpB PLUS ribosomal protein alanine acetyltransferase [Legionella pneumophila str. Corby] # 6 164 175 337 601 82 31 3e-14 MITKHVVVLPYDKHWARDFCEIKSEIQEALDQLALAIEHVGSTSVHGLSAKPIIDIDVVI KDYSMLDAVISALERIDYHHEGNLGIAGREAFKYEGKTHLRKHHLYVCPRDSEELKRHIA FREYLRSHPEAVREYSRIKEEGAALYPFDIEKYIEHKSPFVEKIYSEIGI >gi|197324944|gb|DS990230.1| GENE 426 483122 - 483820 942 232 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1402 NR:ns ## KEGG: BBPR_1402 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 232 1 232 232 345 100.0 6e-94 MKQSNVIKGTLAVVALVAALVVGVAVHMHSVGSPTAGHSTQNTAKTATETTAKTAESITA DYPGYSSAEEGVKAAGLVVTGVPLDSRERILYPEIDFTSGTPETNPQYGLTEDDIDMDAL GVPETVTRVRVTKVIKGDAKVGDIIEVAQVGGVDKSGIVRRETSTTLLNEAKASGTAEFL LLLNEYDVVYNAINPISGVLGVDTDGHVTALKSSGESGGIGESLKEYMNAVS >gi|197324944|gb|DS990230.1| GENE 427 483936 - 484235 134 99 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MALGLVTRTCRSASSGPNVDPSKASMHTGASSLRTACAISLTNMVFPLPMFRLFSQRLCL AGYGNHRVTVVPRRHFSRCEETEIAHYACIGQPLCDQPL >gi|197324944|gb|DS990230.1| GENE 428 484087 - 485391 1920 434 aa, chain + ## HITS:1 COG:Cgl0557 KEGG:ns NR:ns ## COG: Cgl0557 COG2230 # Protein_GI_number: 19551807 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Cyclopropane fatty acid synthase and related methyltransferases # Organism: Corynebacterium glutamicum # 7 432 10 433 435 356 43.0 6e-98 MGSGKTMLVSEMAQAVLKEDAPVCIEAFDGSTFGPEDADLQVRVTSPKAIYQLASNLNEI GLARAYILGYFDIEGLDVADPYPQLRKLVELASYIRKPSPLELARMGAAVLSHGYHKVEV PQSEGPSKFERIKSGLFPHTEKADSETVSFHYDLSNEFYADFIGPSMTYTCAVFDTPDMS LDDAQRNKIDLVLDKLDLKPGDRMLDIGCGWGALVIAAAKRGIKALGVSLSHEQIEYGQE WIRREGLENLAELRVMDYREVPERDFDGITSVGMMEHVGAKNYRHYFDEMFKLLKPAGRL LNHQITISKDKPNNRPGTDEFLDRYIFPDGDLASPGFIESALHDAGFEVVNQENLRQHYA LTLHHWNANLKANWADAVKQVGYERAKVYGLYLAACELNFELNGIQVHQFLAVKPDKEGL PKGNWYPLRPWWAA >gi|197324944|gb|DS990230.1| GENE 429 485412 - 486437 1343 341 aa, chain - ## HITS:1 COG:STM4425 KEGG:ns NR:ns ## COG: STM4425 COG0673 # Protein_GI_number: 16767671 # Func_class: R General function prediction only # Function: Predicted dehydrogenases and related proteins # Organism: Salmonella typhimurium LT2 # 2 341 3 336 336 250 38.0 3e-66 MINVGFIGCGAMGRDHVRRITDKCGNAQVVGVYDTVLGNAKQAIEDNRLDATIYDSADAL IDDPNVDAVVIASRNDVHLDPLLHTIAIGKPTFTEKPMTINGSDSWKVVEAEVAKGRKTI QVGFNWRFDPGYDAMKTFVGDGQIGALLMAGMRHYNAQASTSYYSTDNVINDTLIHNFDM LHYMFDGDITSVEMKFARMNTLNPNGESLREPQLSIVEFSDGALATAEANVNCQYGYDIQ CRLVGESGIISLPDVATPEVRKAGQISHAISSAWFDRFIEAYDREFDRFFANIEADRQPG GKEATAWDGYVANVVADAALDSLHHGGRIPVTLNEQPALYR >gi|197324944|gb|DS990230.1| GENE 430 486505 - 487392 1414 295 aa, chain - ## HITS:1 COG:lin0212 KEGG:ns NR:ns ## COG: lin0212 COG4975 # Protein_GI_number: 16799289 # Func_class: G Carbohydrate transport and metabolism # Function: Putative glucose uptake permease # Organism: Listeria innocua # 4 294 3 285 285 187 40.0 2e-47 MWPILLALVPAFGWGFQGIVMQKVGGTTANKQMGMVLTTLLFGIVVLIFHPINWSWTLIA AAAINGIPWSIAQILQIKSFDYLGVARAMPLSTGMQLVFTTLLGALFFHEWTHGWQFGFG ICALVVIIVGVACTAFQEKSEDKGPSNLKRGLLITLISSLLYTSYAAAGKFFSVSSWDML FPQAVFMVLGTTIISFCMSGKDAMDPEIGVFGKKSWMNMSTGALFATANLTVMLSNEMNG LAVGWTLSQMNVIVATLGGLFILKEKKTKKEMAFVIAGMILIALGGILIGITKNA >gi|197324944|gb|DS990230.1| GENE 431 487692 - 488735 1348 347 aa, chain - ## HITS:1 COG:mll3844 KEGG:ns NR:ns ## COG: mll3844 COG4977 # Protein_GI_number: 13473293 # Func_class: K Transcription # Function: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain # Organism: Mesorhizobium loti # 99 336 94 325 332 126 35.0 8e-29 MRIAVPLPGTMWAFDVISIIQIFDDDSVMYGSSDRPVIDFIANASSKALDHGMSIATTAL RDYHEKPDLIIIPGFANPHEIATDRRTRDAKARLFTADPADALAIRDWLVASHREGVEIA AMCTGVFALAWTGLLDGVECTTHLPFLDDLAAQFPKALVQKDRLLTHNAKQRIWTSAGGS ICLDLCIALLAEHAGQSLATAEANMLMMHYPRSVATRRSDGAPSVLPRPSQQSDEIIALT RRVREHLSYDWTLTTLAQTSHSSTRSFQRRFSEVMGVPPSTWLLTERLNAAKELLELTDL PMQQIALRTGLRNADSLRKHFSAAFGVSPSRYRQDFLRTELRPMENV >gi|197324944|gb|DS990230.1| GENE 432 489050 - 489262 390 70 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|224283864|ref|ZP_03647186.1| 50S ribosomal protein L31 [Bifidobacterium bifidum NCIMB 41171] # 1 70 1 70 70 154 100 5e-36 MQQGIHPDYHAVEVLCSCGNTFVTRSTYKGDHMTVDVCSKCHPFYTGKQKILDTGGRVAR FEKRYGKKTK >gi|197324944|gb|DS990230.1| GENE 433 489408 - 490496 1539 362 aa, chain + ## HITS:1 COG:MT1338 KEGG:ns NR:ns ## COG: MT1338 COG0216 # Protein_GI_number: 15840749 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Protein chain release factor A # Organism: Mycobacterium tuberculosis CDC1551 # 13 358 12 354 357 354 56.0 2e-97 MAVEQFPAAQTALEEYQSIEQQMASPEVVTNPDKMRKLGRRHAELGAIVSAYQSYTAVRD DLEAAREMAGEDPEFADEAKRLEAELPAAEEKLRNALIPRDPDDARDVIMEIKAGTGGEE AALFAGDLLRMYLRYAEKRGWAVTVQSENTTELGGVKDVQIAIRAKGTPAPEDGVWASLK YEGGVHRVQRIPVTESQGRIQTSAAGVIVFPEADEDDDEIEIDPKDLKIDIFMSSGPGGQ SVNTTYSAVRMTHIPTGIVVSMQDEKSQIQNRAAALRVLKSRLLAMKHEQEAAEAADMRH SQVRSLDRSERIRTYNFPENRIVDHRTNYKAYNLDAVLDGDLQAVIDSDIQADEAERLAN QQ >gi|197324944|gb|DS990230.1| GENE 434 490761 - 491750 186 329 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|153001286|ref|YP_001366967.1| N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase [Shewanella baltica OS185] # 97 299 80 278 314 76 29 2e-12 MTSESIHDVTDVIRSAARTLHDADIDTPEHDAKLLLAEACGRDLRDIDKAMLMGEPLDGL PHEHASFDAPDAGAASSDSSDTVGDAVTTALARFHAMIARRAAREPLQYITGHAPFRYLD LEVGPGVFIPRPETETVVQAGIDWLTRERLSTPRIVDLCAGSGAIGLSLVTEVRGAQVWA VEKVPRTYDWTMRNWRRISRLDPLAADNYHLELGDATSGTTLTQFDGTIDMVVTNPPYIP EAQIPEQPEVRDHDPKAALYGGSADGTLIPERIVMRAAGLLRPGGVLVMEHDISQGPRMV SFAQANGFGQAHTGDDWTGRPRYLFAVRS >gi|197324944|gb|DS990230.1| GENE 435 491693 - 492049 216 118 aa, chain - ## HITS:1 COG:SA2342 KEGG:ns NR:ns ## COG: SA2342 COG0110 # Protein_GI_number: 15928134 # Func_class: R General function prediction only # Function: Acetyltransferase (isoleucine patch superfamily) # Organism: Staphylococcus aureus N315 # 35 91 114 161 199 62 57.0 3e-10 MRERAGDLCTRFNALPRGDHAGRAAVLDELLPPMHPIRFQDRNVRRAADGSYYDYEYGKP IVIGSNCWFGGNVTVVGGVTIGEGCVIGAGSARPRHQILGQDLTANRYRGRPVQSSPV >gi|197324944|gb|DS990230.1| GENE 436 492354 - 493013 587 219 aa, chain + ## HITS:1 COG:aq_651 KEGG:ns NR:ns ## COG: aq_651 COG0009 # Protein_GI_number: 15606072 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Putative translation factor (SUA5) # Organism: Aquifex aeolicus # 4 211 2 195 198 99 33.0 5e-21 MSAVRKVNEESLAEAASVIAGGGLVVIPTDTVYGVACDPRNEAAIDRIYQVKSRPRFKAL QVLLASVDQLDGLGLDLPSPLNRLAAQFLPGAFSPIAVAREDCTLATVSATPQGRRTQGI RVPNSALTLRILNELGPLAASSANRSGDESAQTVEEAVQAFGDDVQLYLDGGPTQGHVAS TVVAADPHERDGIVILREGVIPQPVVRKAVHMNGGGLGA >gi|197324944|gb|DS990230.1| GENE 437 493010 - 494191 1411 393 aa, chain + ## HITS:1 COG:Rv1302 KEGG:ns NR:ns ## COG: Rv1302 COG0472 # Protein_GI_number: 15608442 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase # Organism: Mycobacterium tuberculosis H37Rv # 1 359 30 394 404 222 39.0 9e-58 MRIYLLIAAIAGGVTWLVTPLIRHVAIHIGAVGEVRARDVHTIPTPRMGGLGMLIGFAFA MIYSSRIAFTTGLFENNNQEWVILAGAVLICLLGMADDLWDLDWMLKMAGQLLISVFVAW GGLQIISLPLGSLITASPSISVTITAILIVASINAVNFVDGLDGLAAGIVAIGGVAFAAY SYIIARNSPSYASMATLIDVAMVGICIGFILHNWHPAKLFMGDSGSMLLGYLITCASIVM TGRLDPASIHASVYLPVFMPILLPILVLFLPVLDMCLAIVRRLSHGQSPMHPDRMHLHHR MLRIGHTVQGAVLILWGWAALIAVGSIMTLFFKVHYVLIGFVIAVVLLTVATMYPYLKRR LPEIAAENQSYASARRRARHSFDESGDGKKRRP >gi|197324944|gb|DS990230.1| GENE 438 494261 - 495805 2347 514 aa, chain + ## HITS:1 COG:Cgl0587_3 KEGG:ns NR:ns ## COG: Cgl0587_3 COG0516 # Protein_GI_number: 19551837 # Func_class: F Nucleotide transport and metabolism # Function: IMP dehydrogenase/GMP reductase # Organism: Corynebacterium glutamicum # 220 509 1 291 292 351 61.0 2e-96 MATNSEANMQSYAPVPPIFSKLGLAYDDVLLLPNETDVIPSEVDTTTHLTREITMKVPTI SAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMITDPLTVNPDVT LADLDKLCGKFHISGLPVVDKENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGP ANISKDDAHRLLAQHKVEKLPLIDDNGKLAGLITVKDFVKTEQYPDATKDEQGRLRVAAG IGFLGDAWQRASALMEAGVDVLVVDTANGEARLALDMISRIKRDPAFRGVQVIGGNIATR SGAQAMIDAGVDAVKIGVGPGSICTTRVVAGVGVPQLTAVYDAAQACKAAGVPCIADGGI HYSGDIAKALVAGANTVMLGGTLAGCEEAPGEKVLLHGKQYKLYRGMGSLGAMAPRGKKS YSKDRYFQADVTSNDKVVPEGVEGEVPYRGPLNAVLYQLIGGLHQSMFYVGAHNIAELQE KGRFIRITDAGLRESHPHDIVMTTEAPNYTGFHN >gi|197324944|gb|DS990230.1| GENE 439 495959 - 497749 2331 596 aa, chain - ## HITS:1 COG:Rv2471 KEGG:ns NR:ns ## COG: Rv2471 COG0366 # Protein_GI_number: 15609608 # Func_class: G Carbohydrate transport and metabolism # Function: Glycosidases # Organism: Mycobacterium tuberculosis H37Rv # 21 593 31 545 546 372 41.0 1e-102 MAEETQSITTRHDAEIDPALWWRQAVVYQVYPRSFQDTTGSGLGDINGITGRIPYLRQLG VDAIWLSPFYPSELADGGYDVADYRDVDPKLGSMDDFDRLAAAAHAADIKVVVDIVPNHS SHLHPWFRQALADGPGSPARDRYIFRDGKGPNGDEPPTRWQNHFGGPAWTRVDDGQWYLH MFTKEQPDWNWRNPDVCADFLETLRFWCDHGVDGFRIDVAHGLAKDLDRDDLDDYVVMST NDMPADGSHPVLDRDKVHDIYREWRREVFNRYDPPRFAVAEAWVRPERQYLYASPDELGQ VFNFEFAKADWTFDAMSKAIDEGLACAERSGSTSTWVMSNHDVPRHATRYALPQVPTGEY HQIANDWLLRDGTTYIEDRQAGALRARAALMLEMALPGSAYVYQGEELGLFEVADIPWDR IEDPSGLRTSRAQSTKGRDGCRVPLPWVASDVPETYTSDKRHVHAGSFGFSPAVSDAEPH LPQPAWFKDFAMDIQDADDGSMLNFYRRVLRLRHEMQTPDTSCTLLPENRPSGMRDGADG QPGGVIAYRRANGWANLTNFGATPVSLPNGEVLLSSAPLTDDGRLPQDTSVWMRLR >gi|197324944|gb|DS990230.1| GENE 440 498222 - 498521 178 99 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1344 NR:ns ## KEGG: BBIF_1344 # Name: not_defined # Def: sensor histidine kinase/phosphatase of two-component system # Organism: B.bifidum # Pathway: not_defined # 1 99 1 99 99 181 97.0 8e-45 MLKPHSGIIKDPDGRAVLLGCARHRKWAQIRVSDHGPGIGGDPERLFRRFARDDDGTARQ GYGLDLALARDVANRYGGSVAVESSSPSGTTMLLSFPLA >gi|197324944|gb|DS990230.1| GENE 441 498591 - 499241 842 216 aa, chain + ## HITS:1 COG:ML0427 KEGG:ns NR:ns ## COG: ML0427 COG1949 # Protein_GI_number: 15827135 # Func_class: A RNA processing and modification # Function: Oligoribonuclease (3'->5' exoribonuclease) # Organism: Mycobacterium leprae # 17 206 5 195 215 178 50.0 5e-45 MVDSHDAETYSAKDSRLIWIDCEMTGLDIFGGDELVEVSVVPTDFDLNVLDEGVDYVIKP SDAAVAHMNDFVRAMHTRSGLINEWEHGLSLEEAERKVTEYVLRFTPDGVRPLLAGNTIG SDKKFLDHYMPGLMSHLHYRSVDVSTLKELARRWYPAVYENRPAKNGGHRALADIIESLD ELRYYRQAFMAPAPGPNEAESKAIADQIVATSLLNK >gi|197324944|gb|DS990230.1| GENE 442 499298 - 500149 1123 283 aa, chain + ## HITS:1 COG:Cgl0894 KEGG:ns NR:ns ## COG: Cgl0894 COG0561 # Protein_GI_number: 19552144 # Func_class: R General function prediction only # Function: Predicted hydrolases of the HAD superfamily # Organism: Corynebacterium glutamicum # 12 283 12 275 277 226 44.0 4e-59 MTANDWTAICDKPRDIRLIVADMDGTLLDGDSNIPDDFWPLLDELHAKGVEFVPASGRQL ATLRSMFADRVDGAMSYIAENGNVVVADDNVIDVHGVSWDITRTLIDLVDAAVASGSHDI GLVICGLNTAYIQRQDRPFVEECSKYYKALRIVDDLHEVLETEDETVLKLAIFDFGDAQG MAADLLGDVERTHQVVVSGAHWVDIMNPGTDKRQGVVALQRHLGVTPAQTAVFGDYLNDL QMLDAGGWSFAMANAHPDLKRAARYIAPANTEHGVLQVVRRLV >gi|197324944|gb|DS990230.1| GENE 443 500221 - 501633 1480 470 aa, chain + ## HITS:1 COG:SPBC887.14c KEGG:ns NR:ns ## COG: SPBC887.14c COG0507 # Protein_GI_number: 19113280 # Func_class: L Replication, recombination and repair # Function: ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member # Organism: Schizosaccharomyces pombe # 15 408 327 758 805 222 34.0 1e-57 MRQSEALAILNAGANVFLTGAPGAGKTYVLNEFIRQARADGANVAVTASTGIAATHIDGQ TIHSWSGVGLANVLTPNLLKTIKTRRRRKIQAADVLIIDEVSMMHAWLFDMVDQVCREVR HDPRPFGGLQVVLSGDFFQLPPVSVSGRDRDVLPPGPDFVASRERYAKAGLNPEGFVTES LVWGELAPVICYLTEQHRQDDGRLLHVLTDIRAGCVDQDDRDALVTRLGVTPKPGEVAVH LFPVNRQADNLNDSRLARIGEEPHEFHAEQMGPTHLVERLKRNMLAPECLVLKTGAAVMA LRNDADHQYVNGSLGTVRGFVNENKGGWPIVEFENGNIVTMKQATWEMMDGDTVMASVAQ VPLRCAWAITIHKSQGMTLDRAVMDLSRTFAPGMGYVALSRVERMGGLYLAGVNERMFAV SADAVMLDGDLRGGSQAASARLGNEGVAAFRPQTPHEDEPAGEFEQAELF >gi|197324944|gb|DS990230.1| GENE 444 501732 - 501845 71 37 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MAGSATRNLRWIFGAAARYEASLESVQSLGKRISQLR >gi|197324944|gb|DS990230.1| GENE 445 501970 - 502377 78 135 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1340 NR:ns ## KEGG: BBIF_1340 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 13 123 89 199 211 180 97.0 2e-44 MGQRIGRGRLASPATTPVFAPGLAEDEPSPDVPPGTVPGLFCSLPPGAVLFGLGCVTIAL RAVHQKGRQPLRAWSLYASFSLPVSLMLLCDLPTLPRYMSEAVSVAVFTMLAGAACLIGP GNMSPSASSSPSSAL >gi|197324944|gb|DS990230.1| GENE 446 502606 - 504426 2638 606 aa, chain + ## HITS:1 COG:Cgl1948 KEGG:ns NR:ns ## COG: Cgl1948 COG0442 # Protein_GI_number: 19553198 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Prolyl-tRNA synthetase # Organism: Corynebacterium glutamicum # 7 584 4 568 588 602 55.0 1e-171 MSSKALRMSTMFLRTLREDPADADTDSAKLLLRAGYVRKAAPGIWTWLPLGLKVLNKIEA IVREEIDGIGAQEVHFPALLPREPYEATHRWEEYGENLFRLKDRHEADYLLAPTHEEMFT LLVKDMYSSYKDLPVTLYQIQTKYRDEFRPRAGLIRGREFIMKDAYSFTIDEEGMKKAYY DERGAYERIFQRLDLKYVPVFAMSGPMGGSASEEFLAPMAIGEDTFALAPSGKAWNVEAL TTPELPAVDSSAVPAMESRETPDSKTIEDLVATANRLYPREDGREWTAADTLKTVAVTVL HPEDDDHEGPWREVIAVALPGDRQVDMKRLEAQFAPAELEESTEDDLKAHPEMVAGYMGP MVFGKQGEAAGVAEPVRFFIDAHVAEGTEWIIGGDEAGKHRFHAVYGRDFKADGTVEAVE VRHGDMSPDGSGPLSFERGVEIGQVFQLGLKYSKALDLKVLDQNGKTVPVWMGCYGIGVS RVLACIAETHHDERGLAWPAVIAPAQVHVVATGKDAAAFDAAEKLVAELEERGIEVIYDD RKKVSPGVKFKDAELIGVPLIAVAGRDTVNNGTIEIRNRDSSDSVAVPVADAAQTLASRL DTLLGK >gi|197324944|gb|DS990230.1| GENE 447 504254 - 505042 76 262 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1381 NR:ns ## KEGG: BBPR_1381 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 183 83 264 307 316 91.0 6e-85 MFSITLAGDWWPIAVLPILFGPGGIMPWILGGAFNNRPWIVAIASVLVLQFIIISALGAS IGHFAMYLTFGPHVPGLTDSTTGRAAEQLYVSSSPQTWIPGLITAGIALMLAVIMAAVTG ASSARQNGTAMNRLRIIAYVLSCLGFVALLIAICIMPASLRNKQTNILLAVLAFLTLVVW IPGIKRRSGGFRMKDPTSSDQESCRTTCRAACPDATPASAQRRRPARRRNRSCHGCGSRL FRYSRCHGRRLQSAARRSARRP >gi|197324944|gb|DS990230.1| GENE 448 505362 - 506027 551 221 aa, chain + ## HITS:1 COG:Cgl2401_1 KEGG:ns NR:ns ## COG: Cgl2401_1 COG0629 # Protein_GI_number: 19553651 # Func_class: L Replication, recombination and repair # Function: Single-stranded DNA-binding protein # Organism: Corynebacterium glutamicum # 8 120 6 124 124 63 33.0 2e-10 MAIQQGTVTITGFVGSMPVPFGRSGGVEGCSFRMGSTRRYRDGGTGEWRNLPTTWITVKA FRTLASNARMSLHVGEAAIVTGVLSTEEWTTQNDERRSRIVVEATNIGHDINYGVSELKK FQKSDRDAPAQGNGTPANPGLPPSPGGGTATAGAGQQADAHPVHPTPVTFDNLGEETPTD NPQTSQTQETSQAQEFGSGFAESPLDESTTEDMRPAGEAEF >gi|197324944|gb|DS990230.1| GENE 449 506076 - 508157 3219 693 aa, chain - ## HITS:1 COG:MT0208 KEGG:ns NR:ns ## COG: MT0208 COG3590 # Protein_GI_number: 15839578 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Predicted metalloendopeptidase # Organism: Mycobacterium tuberculosis CDC1551 # 1 693 1 662 663 567 46.0 1e-161 MTTDLTSGLDTAAFSSVIKPSDDLFRFVNGPWIDTYRLPDDKARYGSFDKLAEDAESQIR DILEDEDCPAAKSQALYRSFMDTDAIEAAGATPIRPALDAIDHAADKAALTRTIGALKPI DMGPDVFDIAVFGDPKNPDTNVVHLEQSGIGLPDEAYYREDHYAPIREAYVDMVAKQLRL AGYGDEETTRAQADRFLDVETRIAANHWDNVATRDSQKTYNPTDFVTLSDELAHFNIAAW ADAWQGAYDATPAAKTQPVDLTAALQHTIVHEPSFLKGFDAFWNNADLDDLKLWARVHVI IGTASLLSHDYDVANFDFYGKVLSGTTQQRDRWRRGVSLVNGVCGEDVGREYVKRHFPES SKQRMGQLVDNLIDAYRVSITNSDWLGEETKAKALEKLSKFTPMIGYTERWRDYTAFDVH ADAGLVANMQAAALYEWGFQLSKAGKPVDKGEWLMNPQTVNAYYEPSMNVIVFPAAILQP PFFNPDAEDAANYGGIGAVIGHEIGHGFDDQGAQYDGDGVLNDWWTTDDKANFEKRTKAL IEQYNAFVPTQLAEKYADEPNKAPHVNGALTIGENIGDLGGVNIALKAYAFALDEAAGRD KDGSAKAIEESLSAAPVMDGWTGLQRFFLSYASIWRSKNRDELAEKYLQIDPHSPAECRT NGIVRNVDLFYRAFDVTPDSAMWLDPDKRVRIW >gi|197324944|gb|DS990230.1| GENE 450 508296 - 509291 944 331 aa, chain + ## HITS:1 COG:MT1660 KEGG:ns NR:ns ## COG: MT1660 COG3247 # Protein_GI_number: 15841079 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Mycobacterium tuberculosis CDC1551 # 167 323 31 185 195 80 33.0 3e-15 MVVTVTISKWPASDARTRLTAGRMNGEGVMMSTYDGGPFPHSDGHGDSGRGDGGQPGGNE QAGRAGEPEYGAYAPQGQPAGQQYPYGGAPQDGTASGQYQTQPGTASDQPGRPYGQPYAY QPPFGQQQPGQQQGQGGWEDFSPFRLIEEMLPQKAKNAIRGLYGIIGVAAIVLGVALLIW PGKTLGVAAVALGIYFVVSGVIRIVSAIVTLGLPAGWRILDILIGIMLSVGGVLMLKNAA LSGQALAVFITMVVGLGWMMEGVMALAESWRLPSSGWAVLYAIISIIAGLVVLVSPVSSM LFLVIFCGCALIVMGVSSMVRAFKFGRPRRK >gi|197324944|gb|DS990230.1| GENE 451 509316 - 510092 1204 258 aa, chain + ## HITS:1 COG:aq_076 KEGG:ns NR:ns ## COG: aq_076 COG0024 # Protein_GI_number: 15605674 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Methionine aminopeptidase # Organism: Aquifex aeolicus # 2 255 3 256 258 186 40.0 3e-47 MIELKTAKEIEEMKPAGRFVGEILKELKAMTKVGTNLLEIDEYVHKKIVDRKGAESCYVD YAPDFGTGPFAHYICTSVNDAVLHGIPFDYNLKDGDLVSLDLAISVNGWVGDSAISFVVG NDPDPSDLKLIKCTEEALAAGIDAARPGNRLGDVSSTIGDIARSYGYPINLEFGGHGVGH IMHGDPHVANDGKAGHGYRLRPGLVIAIEPWFLKTTDEIYQDPKDGWTLRSEDGSRGAHS EHTIAITENGPVILTTRD >gi|197324944|gb|DS990230.1| GENE 452 510303 - 511595 1707 430 aa, chain + ## HITS:1 COG:MT0920 KEGG:ns NR:ns ## COG: MT0920 COG0372 # Protein_GI_number: 15840315 # Func_class: C Energy production and conversion # Function: Citrate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 3 430 7 431 431 427 50.0 1e-119 MATAELHADSNQYTLPVVKASAGPDGIVVSKLRNDGWVTLDPGFLTTAQCESKITFIDGN RSILRYRGYPIEQLCEHSDFLEVAWLLRHGDLPTQAEYDRFCSDINHKTMVGEDFRTFMG SFPRAAHPMSVLAAAVNALAAFYPDTTDITDSDQLDEAAKIIMAKARTVVSYIFRRRRDE PMLYPDLARGYVDDFLRMCFAVPYERFDSDPLYVHALGRLLIIHADHEQNCSTSVVRIAG SAHANLYAAISAGINALSGPLHGGANEAVLRQLKAIRDSGKSVRQFVEDAKAEGHRISGL GHRVYKSYDPRAAIARLYLEKIIAREDTRKLPADERALFDVAVELEDIALNDEYFVSRHL YPNVDFYTGLIYRAIGFDPAMFTTLFALGRIPGWIAQYREMLADPNTKIGRPRQVYTGEV ERAYIPLNQR >gi|197324944|gb|DS990230.1| GENE 453 511693 - 512235 789 180 aa, chain - ## HITS:1 COG:BS_polC KEGG:ns NR:ns ## COG: BS_polC COG2176 # Protein_GI_number: 16078721 # Func_class: L Replication, recombination and repair # Function: DNA polymerase III, alpha subunit (gram-positive type) # Organism: Bacillus subtilis # 9 164 419 574 1437 137 43.0 1e-32 MLPDGTLPDDYVVLDLETTGVSWYRDTIIEFGAVKVVDRKPVDTYQQLVNPMRNLNPFIT QLTGITPDMLEPAPTLDTVLPDFLRWCGDDAMIGHNIMQFDIKFIDLAAQRILHHAVPNR IIDTLQMSRSMYPQYNRHRLVDLIQRFDIADVEEHRALSDAEQTQMCFEYMRDEQRRRDC >gi|197324944|gb|DS990230.1| GENE 454 512575 - 513582 1362 335 aa, chain - ## HITS:1 COG:mll3309 KEGG:ns NR:ns ## COG: mll3309 COG0667 # Protein_GI_number: 13472878 # Func_class: C Energy production and conversion # Function: Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) # Organism: Mesorhizobium loti # 8 335 3 330 348 395 59.0 1e-110 MFEPTGTYAPATTRYDTMLYKRCGASGLKLPAISLGFWHNFGDITPYDQMKALVLTAFDH GITHFDLANNYGPEPGAAEKNAGRLIRQYLAAHRDELVVSTKAGYEMWSGPYGDWGSRKY LLASLDQSLERLGLDYVDIFYHHRPDPETPLEETMGALAQAVASGKALYVGLSNYDGPQL ERAATILDELHVPFIINQNKYNIFDRTVERNGLKDTAKHLGKGLITFCPLAQGLLTDRYL NGIPADSRVAHDPRFLHADDVTRVHGQIMALNEIAKQRGQTLAEMSLAWLLHDDAVTSVL AGASKPQQIIDNIGALKNTDFSDEELKAIDEISMQ >gi|197324944|gb|DS990230.1| GENE 455 513725 - 514054 262 109 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1330 NR:ns ## KEGG: BBIF_1330 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 98 1 98 109 174 95.0 9e-43 MSIEDLKRFFAFEADEPEHIDDIVALLEDRRAAIEEQRRTLDEAYAHVLRKLHYYGIRPI SAAAARPPLRPFSDTAPAGIHGKTMKPHAVYRPCGQHDCCRSRRKSRRI >gi|197324944|gb|DS990230.1| GENE 456 514094 - 516508 3272 804 aa, chain - ## HITS:1 COG:SP1623 KEGG:ns NR:ns ## COG: SP1623 COG0474 # Protein_GI_number: 15901459 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Streptococcus pneumoniae TIGR4 # 1 797 6 773 778 517 38.0 1e-146 MTGLTTSEVEERRARGEGETGARSVTKSTGAILRENICTLFNALNFAIAILLFAVGAYSN MLFIAIIILNIVIGIVQEFKAKKLVDELTILNQPHAVVLRDGKETTIEAGDIVKDDVMVL DSGKQICNDAVVIDGRLEVNESLLTGESDSIDKTAGSELYSGSSVISGRAYARVTHVGDE NYTNSLINEVRQEKRVHSELLDSMRKVTRFTSFLIIPLGVLLFVEAMFLRHSGTYDAVVS SAAALLGMLPKGLVLLISVSLATGVIRLAKAKILVQNIYSLETLAHVDVLCLDKTGTLTD GNMSVDRIVPLGERGAAEDSDALLRAYLDASEDNNVTIAALRAHFGADGSTADAGQPAAP AGDGRFAAQAIIPFSSKRKWGAITMRATAGAADAPRHTQEGESAAAATGTVFLGAPERIL GVNLPDEAAALMGQGLRLIAVGYLPGAWTDEERLPDALQPMFLIALRDNIRPRAKETLAY FRDQGVDVKVISGDHPDTVAAVARQAGLERWRDVIDMTSVPADAPDSTFDDVAGRYTVFS RVTPKQKRQLVQAMQRAGHQVAMTGDGVNDLLALREADCSIAIASGSDAARQISQVVLLD SDFTYLPQVVLEGRKVVNNVTRTAAVFFIKTIYSVLVSFFCLALNVPFPFIPIQITLVDA CIEAWPSFLTIFESDTRRIRGRFLPTALGKAAPFAIAVTGMIIAFSLIAPFGETQNRTVM FALLIAASMVAVIKSCVPFTKIRVFVCVTMVLGAPFALLILPHLFEVVAMTGPMRAWFAV AFVVMTAVTAAIIAAQRAWLRSRR >gi|197324944|gb|DS990230.1| GENE 457 516653 - 519571 4151 972 aa, chain + ## HITS:1 COG:L119891_1 KEGG:ns NR:ns ## COG: L119891_1 COG1136 # Protein_GI_number: 15672696 # Func_class: V Defense mechanisms # Function: ABC-type antimicrobial peptide transport system, ATPase component # Organism: Lactococcus lactis # 38 329 3 290 290 231 41.0 6e-60 MLAVNHEALGERVGYSGVIPQIMETYDEPPMGNKGSIVLQIKSISKQYKTGDFVQKALDD VSLNLRDSEFVAILGPSGSGKTTLLNIIGGLDRYDSGDLIINGVSTKRYKDRDWDSYRNH TIGFVFQSYNLIPHQTILSNVELALTISGVSRTERRERARKALEQVGLGDHINKKPNQLS GGQMQRVAIARALVNDPDIVLADEPTGALDSDTSVQIMNLLKEVAKDRLVVMVTHNPELA EQYATRTVRLRDGVIRSDSDPYEVEEGASEAPVHKRLGKASMSLATSIALSFNNLRTKKG RTLLTSFAGSIGIIGIALILSVSTGVNAYIDSIQRDTMTAYPITIDSQTFDMTSIMGAQA GGKETGGKSAKNDGIYPDDRSIKQTSSLTSSITKNNLADFKKYLDDPNSEVRQYVGETGI QYTYDVKFSVFSHDPDGTLVTANGVTIGAKSDSTSNAARMSSMGQSSSMSDMTSMQMTML TGKTDTSASPDSFHEIMPGAKDDQLISKVITDNYRVVKGAWPTGKDQVVLVLDDDNKVPL TTLYELGLLKASDYTDMMNKLNDGETVKTPTGKIDYATAMGQKLAMIPASDQYVKDTNGD YTYIGDDADTIAERFDSAEQLKIVGVVKPIKDASATPLATGIGYTRALTDELIDHANSSA IVTDQEKDKTRDVLNGLAFSPSDDAAKAADAKTYVASLGVSDKANMAKAMMQSQSAQSAQ PGQAGQSAAGGQRTAAMSEQQLADSFDQYIATASQDVLVKIYDQYVSTGTYDDNLAAFGV VSRDVPSTINIYTDSFEDKDHVSKAITDYNKTVPKADKIVYTDYVGLMMSSVTTIINVIS YVLIAFVSVSLVVSSIMIGIITYISVLERTKEIGILRAMGASKRNVSQVFNAETGLIGLC AGLIGIGVTLLLLIPGNQVLHHFIGTNDVNAALPVAGAVILVVLSVVLTLIGGLIPSRKA AKQDPATALRTE >gi|197324944|gb|DS990230.1| GENE 458 519588 - 520832 943 414 aa, chain + ## HITS:1 COG:CAC2834 KEGG:ns NR:ns ## COG: CAC2834 COG1929 # Protein_GI_number: 15896089 # Func_class: G Carbohydrate transport and metabolism # Function: Glycerate kinase # Organism: Clostridium acetobutylicum # 6 410 9 378 380 322 44.0 1e-87 MRYLCAPDSFKESLTAAEAARAMAEGIRRGDPDAEIRCLPMADGGEGTARALADATGGTM LTAGAHDPLGRPVQAGFALLGDGRTAVVETAAASGLALLRPSERDPKATTSYGTGELIRA ALDAGAETIIVGLGGSATNDAGCGLLQALGVLPLDHDGRDVRPGGAALAEVERVDLSGLD RRLGDVHVIAACDVTNPLTGPEGASAVFGPQKGASREDVTLLDGALRHVSSVIERALAEQ VPAERNGDGGKVEAAVAESSSPGHRSRPDHRTRTPIADHPGAGAAGGIGMALLAVLHADF RPGIDLVIEQSGLDAAAQWADIVFTGEGSIDAQTMFGKTPVGVASVAKRHGKPVIAIAGH VGDGIECLHGRGIDAVFGAAPGAASLDELLRDARANVARTAEQVTRLMRIVRSH >gi|197324944|gb|DS990230.1| GENE 459 520915 - 522303 1726 462 aa, chain - ## HITS:1 COG:TP0921 KEGG:ns NR:ns ## COG: TP0921 COG0446 # Protein_GI_number: 15639906 # Func_class: R General function prediction only # Function: Uncharacterized NAD(FAD)-dependent dehydrogenases # Organism: Treponema pallidum # 4 458 3 443 445 296 38.0 8e-80 MTTVAIVGCTHAGTFAATSILKQHPDWTVHVFERNDSLSFLSCGIALWVGDHVSDPKRMF YSSPKALAEAGATMHMRHDVLDVDVAGKVLRARDMNTGEVGEYRYDKLVITTGSAPVVPP IDGLDEALESGRVLLCKNWDHAMAIKERAGSAKSAVVIGAGYIGAEIAEQFSEIGVKTTL VDALDRVLANNFDATITDDVEQAFDEHGVTLALGQKVTAFRPAAGSDGIEGSGVTVVTEK GEYTADVAILGAGFRPNTALFADQLRMLKNGAIVIDDYMRASLPDNTVLDDVFAAGDSAT VRYNPTGADDYIPLATNAVRQGLLIGENIVAATKRYPGTQATSAVQLYDLAMSATGLTAG GAKRRGIAAKSTTITQDYRPDFMLTTTPVTTTLVWSPVTRRILGAQFLSKHDISQAANVV SVAIQAGFTIDQLAGADLFFQPNFSQPINFVGAVAIQAVAES >gi|197324944|gb|DS990230.1| GENE 460 522353 - 522583 101 76 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MQTLDFHDLHGIFDDRQEPLATRTECSGGNQGATKCDMASRRNRRYDPSAIVMFVTSGPC RAFGLTLAAEPGDMLE >gi|197324944|gb|DS990230.1| GENE 461 522714 - 523943 1480 409 aa, chain + ## HITS:1 COG:L0181 KEGG:ns NR:ns ## COG: L0181 COG0626 # Protein_GI_number: 15672763 # Func_class: E Amino acid transport and metabolism # Function: Cystathionine beta-lyases/cystathionine gamma-synthases # Organism: Lactococcus lactis # 1 385 1 379 380 348 47.0 1e-95 MTRFNTQLVHGLPVNDNNTGAVNPPIYNSSTYAVESVNAMPRWDYARSGNPTRDFLEKQI AQLEHGTRGFAFASGLAAIHAVLSIFKPGDRIVVGKNIYGGTYSLFNEYFAERGLEFDSV DTADYEALDAAISGRDRGGRAASAVYFETLTNPLLQINNVNRISAIAHRYGALSIVDNTF VTPYLQQPLDLGADIVIHSATKYLAGHSEVNAGLVVVLDDEVGNGIYFAQNRFGGVLAPT ECNDVRRGIQTLALRMECQQRNAQAVTEYLLAHPLVRAVHYPGVYGDRNRLLAENGLKGF GGVLSFEVVPGVDPSIVLDNLHVFHLAVSLGAVESLAELPCRMTHFELPREERLKVGITD ELVRLSVGIEDVSDLIEDLGQGFDKAFEALDIDGVSGQVLDRLTTEVAA >gi|197324944|gb|DS990230.1| GENE 462 524088 - 525383 1235 431 aa, chain + ## HITS:1 COG:PA5025 KEGG:ns NR:ns ## COG: PA5025 COG2873 # Protein_GI_number: 15600218 # Func_class: E Amino acid transport and metabolism # Function: O-acetylhomoserine sulfhydrylase # Organism: Pseudomonas aeruginosa # 4 417 3 412 425 350 46.0 2e-96 MTDFSTLAVHGGYNANRNDDAVSVPIYASAAFDLENAARGRDLAAGEISGFEYSRVANPT VDALERRLAALEGGVGAVAVSSGMAAVSYALMCAGEGGGRIIAPTNLYGASVDALGDFLP QFGIHADFVKDINDLHEIESLIGPATRAIFAETVANPNTAITDIRPLADLAHRHGLALIL DNTVPTPYLLRPIEFGADIVVHSTTKGITGHGNAIGGVIVDAGQFDWANGRFLQFTRPEQ VIADIDGNRRSFSGAFGSEAFIRRIRVKYLRTFGAVQSPFNAYLQLIGLETLPQRVARQV ETATAIAGHLEHTPHVVSVNYSGLPDSPYHALAGKYFPRGVGQILSFKVEGGADRVRRIL DGVKLFSYVPNIGDARSLIVDPANITHREVPESYRKAAGVSDDLIRLSIGLEDAGDLMAD LDRAIAGAYGE >gi|197324944|gb|DS990230.1| GENE 463 525548 - 526465 1278 305 aa, chain + ## HITS:1 COG:SPy1884 KEGG:ns NR:ns ## COG: SPy1884 COG0330 # Protein_GI_number: 15675701 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Membrane protease subunits, stomatin/prohibitin homologs # Organism: Streptococcus pyogenes M1 GAS # 7 300 1 295 296 235 42.0 8e-62 MGVLVGMMDVLIILGVIVVIVLAVLCASIFIVPQQQAYIIERFGKYNKVQFAGIHAKIPF VDRISTKTNMRVSQLNVQLETKTLDNVFVTVVASTQFRVNPENVATAYYELRDPAGQLRS YMEDALRSAIPALSLDDAFARKDDVAFDVQKTVGAEMARFGFTVVKTLITAIDPSPQVKS AMDSINAAQREKEATRQRAEAQRIQIETQAAADAEKTRLQGEGQANYRREIANGIVDQIK SLQAVGMDINDVNNVVLFNQYLDVMRSLSESNNAKTVVLPASTPGGYEDLYQQVTKAMLT TNEAK >gi|197324944|gb|DS990230.1| GENE 464 526770 - 528215 1280 481 aa, chain - ## HITS:1 COG:alr3672 KEGG:ns NR:ns ## COG: alr3672 COG1012 # Protein_GI_number: 17231164 # Func_class: C Energy production and conversion # Function: NAD-dependent aldehyde dehydrogenases # Organism: Nostoc sp. PCC 7120 # 1 463 1 448 460 389 44.0 1e-108 MTTKETATTTKQAAARQRAFAQLDATFRSGVTRPLCWRKAQLDAMARMLRQNATVIARAV RADLGKPAAETALMEIGLVLDEIRFIKPRLGRWAARHPKPMHYLLQPAVGWTVAEPKGVA LIISPWNYPVLLSFEPMADAIAAGNCVCMKPSELSPHTSGVMADLIARYMDPQAFRVVQG GPQETTKLLEQPFNHIFYTGGGKVGSIVMAAAAKHLTPVTLELGGKSPVFVDRTANLDVA ARRIAWGRFINAGQTCVAPDYVLATSDVIEPLAGKIAKAVTRFFGSDPQHSDSFGRIINT RHFDRLTALLPDPKNPATRRTVCGGNTRRDDLYIAPTVLLGVKPDALVMQEEIFGPILPI LEVADAKAAVEFINARPRPLSAYAFTGSKRVRRMFEREVSCGALGFNLPLGHLISSRLPF GGVGASGMGSYHGKAGFLEFSHVKTVVGKPAVPDTLSLVYPPYDGLKKILISAVSHTPRV R >gi|197324944|gb|DS990230.1| GENE 465 528481 - 528846 442 121 aa, chain + ## HITS:1 COG:MT1954 KEGG:ns NR:ns ## COG: MT1954 COG1950 # Protein_GI_number: 15841374 # Func_class: S Function unknown # Function: Predicted membrane protein # Organism: Mycobacterium tuberculosis CDC1551 # 1 121 34 159 167 59 34.0 2e-09 MKDFLIRWLVLTVAAAVMVVLLPGMTAVGQPPILGIAVFALFMALINASIKPVTQLIALP FSILTFGLLYLVINWLFMRLASWLAISLFGVGVLVHGFWWAVLGSLIMSIVSGIVGSIVR D >gi|197324944|gb|DS990230.1| GENE 466 529387 - 532713 4721 1108 aa, chain + ## HITS:1 COG:MT1587 KEGG:ns NR:ns ## COG: MT1587 COG0060 # Protein_GI_number: 15841003 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Isoleucyl-tRNA synthetase # Organism: Mycobacterium tuberculosis CDC1551 # 9 1100 4 1026 1041 1114 52.0 0 MVSETTNSHVYPKANEGGETASVAPNPSFPNMEETVLKYWDKDDTFNKSVERNPSGDHSQ NEFVFFDGPPFANGLPHYGHLLTGYAKDVIPRYQTMKGRKVNRVFGWDTHGLPAELEAQK ELGIDSVDQIEKMGIDKFNDACRASVLKYTHEWQDYVHRQARWVDFEHGYKTLNIPYMES VMWAFKQLYEKGLAYQGYRVLPYCPKDQTPLSAHELRMDADVYQDRQDTTVSVAVKLRDE EDAYAVFWTTTPWTVPTNFAIVVGADIDYVEVRPTQGKYAGKKFYFGKPLLSKYEKELGE DYEVVRELKGSEMAGWRYWPVFPYFAGDKAESEGNVPGPEGYQIFTADYVDTVEGTGLVH QAPYGEDDMNTLNAHGIKSTDVLDAGCRFTAQCPDYEGMYVFDANKPILRNLRNGDGPLA EIPAEHRAILFQEKSYVHSYPHCWRCATPLIYKPVSSWFVSVTKIKPRLLELNQQINWIP ENVKDGQFGKWLANARDWSISRNRFWGSPIPVWVSDDPKYPRVDVYGSLEELKADFGDYP RDKDGNVNMHRPWIDNLTRVNPDDPTGKSHMHRISDVLDCWFESGSMSFAQFHYPFENKE KFEQHFPADYIVEYIGQTRGWFYLLHVMATALFDRPAFKNVICHGIVLGSDGQKMSKHLR NYPDVNGVFDKYGSDAMRWFLMSSPILRGGNLIVTAEGIRDTVRQVMLPVWSSYYFFTLY ANAANGGAGFDARQLHADEVAGLPEMDRYLLARTRRLVERVEKSLDEFAISDACDAASDF IDVLTNWYIRNTRDRFWKEDTNAFNTLYTVLEVFMRVLAPLAPMESESVWRGLTGGESVH LADWPYVSDEKTGEATELGRVLVDDPALVDAMEKVREIVSGTLSLRKAAQIRVRQPLAKL TVVVEDVDAVKAYDEILKSELNIKDIEFCTMEDAGSQGLKIVHELKVNARAAGPRLGKQV QFAIKASKTGAWHVDAATGAPVVETPNGEVALEAGEYELINRVEEENAAEVDASVSAALP TGGFVILDTVLTADLEAEGYARDVIRAVQDARKAADLDIADRIALVLTVPSANVADVERF RDLIAHETLATSFAVKEGAELGVEVAKA >gi|197324944|gb|DS990230.1| GENE 467 532855 - 533025 194 56 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1318 NR:ns ## KEGG: BBIF_1318 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 56 1 56 56 87 98.0 1e-16 MCATYYARTSDHGYETCDKPKPPLSATGVNVTAISVAVMALASAATVLLTIKRRRG >gi|197324944|gb|DS990230.1| GENE 468 533221 - 537684 5799 1487 aa, chain + ## HITS:1 COG:SP2146 KEGG:ns NR:ns ## COG: SP2146 COG3669 # Protein_GI_number: 15901959 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-fucosidase # Organism: Streptococcus pneumoniae TIGR4 # 511 1002 11 450 559 235 31.0 5e-61 MLHTASRGCSRSWLRRLTALIAVSALAFVALPNVAVAANPMEYLDVSFGGTFAEDTYTTG GDEVARGSVTKHGSIPTKLDGGGITLAGGTNGVTFTSTASFSASGKVNKGFRAEMEYRTK QTPSNLATLFSAMGNIFVRANGSNLEYGFSTNPSGSTWNDYTKSVTLPSNNVKHIIQLTY LPGADGAASTLQLKVDGVAGETATSAAGELAAVSDSVGNKFGIGYEVNPASDAASRGLAG DVFRARVADSNAPWEILDASQLLHVDFNGTFSGTSYTAASGEQMLGSLVSRSANPSISNS AVTLGGGTAGFDFTPTDFTLGDNEAITRPLVAELRFTPTQTGDNQTLFGAGGNLFLRYES NKLVFGASTKSGNNWTDHKIESAAATGAEHVVSVAYVPNKAGTGAKLVMRVDGGDAQTKN ITGLAYLNSSIKGKVGFGNDVHTDALSRGFVGSLSEIRLAKTSANFTTNEFKLVYSQVSC DTSGIKEANTFDVKPAECEAALKTKLSKLRPTEGQADYIDWGQIGFLHYGINTYYNQEWG HGNEDPSRINPTGLDTDQWAKSFADGGFKMIMVTVKHHDGFELYDSRYNTEHDWANTAVA KRTGEKDLFRKIVASAKKYGLKVGIYYSPADSYMERKGVWGNNSARVERTIPTLVKNDDR AGKVASGKLPTFKYKATDYGAYMLNQLYELLTEYGDISEVWFDGAQGNTAGTEHYDYGVF YEMIRRLQPQAIQANAAYDARWVGNEDGWARQTEWSPQAAYNDGVDKVSLKPSQMAPDGK LGTMSSVLSEIRSGAANQLHWYPAEVDAKNRPGWFYHASQSPASVAEVVKYYEQSTGRNS QYLLNVPPSDTGKLADADAAGLKGLGEELARRYGTDLALGKSATVAASANGTAVAAPKLT DGSKLSSDKAVGNTPTYTIDLGSAVAVDAVKISEDVRNAGQQIESATLQGRVNGTWTNLA TMTTVGQQRDLRFTSQNIDAIRLVVNSSRGPVRLSRLEVFHTESEIQTGARAYYIDPTAQ AAGDGFTKDKPMTSIEQLHDVTVAPGSVIFVKAGTELTGDFAVFGYGTKDEPITVTTYGK SDKATTASFDGMTAGLTLKQALKALGKDDAGWVVADSVTAPASRVYVPQDEISVHAQSSQ NSGAEAAKALDGDSSTNWHSQYSPATSPAPHWVTLDLGESRENVAYFDYLARIDGNNNGA AKDYEVYVSDDPNDFGASVASGTLKNVAYTQRIKLTPKNGRYVKFVIKTDYSGSNFGSAA EMNVELLPTAVEEDKVATPQKPTVDDDADTYTIPDIEGVVYKVDGKVLAAGSVVNVGDED VTVTVTAEPADGYRFPDGVTSPVTYELTFTKKGGEKPPTEVNKDKLHATITKAQAIDRSA YTDESLKVLDDKLAAALKVYDDDKVSQDDVDAAEAALSAAIDALKTKPTTPGGEGEKPGE GNKPGDGKKPGDVIAKTGASTMGVVFAALAMVAGAVVTLEAKRKSNR >gi|197324944|gb|DS990230.1| GENE 469 537792 - 538064 173 90 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1316 NR:ns ## KEGG: BBIF_1316 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 90 1 90 90 147 94.0 2e-34 MSICARQQGERRWHDVGRALSVRGSTVLVVGTVDIGSHSASICKAMGANTLGVRRDPTRT AEGIDRMYRIGERKALCSRRTSDESPALNG >gi|197324944|gb|DS990230.1| GENE 470 538129 - 539142 1042 337 aa, chain - ## HITS:1 COG:VC2677 KEGG:ns NR:ns ## COG: VC2677 COG1609 # Protein_GI_number: 15642672 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Vibrio cholerae # 7 331 2 328 335 144 32.0 4e-34 MDHSQPASMQDVAKAASVSPQTVSRVANGSNAVRPETRQRVEAAMAKLGYRPNYAARALK HGKFKDVGVVLFNMLTYGNARILGGIADAANSNGYAITMQSFARNRERTLHAAIERMKQL PVDGVIAVMEEHVTDFSEFRPPKELPVVIISEDPANYCPTIDADQYGCSAAVVDYLLSKG HKTVYHIAGPSSSRAAESRAQGWHDTLDQLGLRIPPTYMGDWEADSGYQAGLALAHDPDC TAIYAANDQMAYGAMLGLQAAGKRVPEDVSIVGVDDSLSGTIPRLSLTTIRMKFNDIGRE AFFMTKRLCEGLRVPSGVKTVVPAELVERGSVRDLES >gi|197324944|gb|DS990230.1| GENE 471 539269 - 539472 144 67 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNTNTNANGHMNFQPRQSRLCLFTRAKGDTLTDVMPLSFEGLEAKHTAQNLPQRNSSLNL FREMHAL >gi|197324944|gb|DS990230.1| GENE 472 539369 - 540058 1026 229 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1314 NR:ns ## KEGG: BBIF_1314 # Name: not_defined # Def: sugar ABC transporter permease # Organism: B.bifidum # Pathway: not_defined # 1 229 1 229 229 417 98.0 1e-115 MTSVSVSPLARVNKHKRDWRGWKFMWPFALVFVFIVPIFAVCCLFPFVSMLINATKTQSD FTGAFGLGFGKTFALWDNIVTVFTYDDGIFARWLVNTLIYVVVGAGGATLLAIMGGYALA KFRFPGRKAVSAVIIGSISVPGIALAALFTIVATWNDCFLPLIMLKDSDWFPLTIGLNQW KDQASTAGGQAIQNLVITGSLITIIPLVIAFLCLQKYWQSGLAAGAVKE >gi|197324944|gb|DS990230.1| GENE 473 540298 - 542367 2701 689 aa, chain + ## HITS:1 COG:BH3701 KEGG:ns NR:ns ## COG: BH3701 COG1874 # Protein_GI_number: 15616263 # Func_class: G Carbohydrate transport and metabolism # Function: Beta-galactosidase # Organism: Bacillus halodurans # 19 689 8 672 672 434 36.0 1e-121 MSKRRKHSWPQPLKGAESRLWYGGDYNPDQWPEEVWDDDIRLMKKAGVNLVSVGIFSWAK IEPEEGKYDFDWLDRAIDKLGKAGIAVDLASATASPPMWLTQAHPEVLWKDERGDTVWPG AREHWRPTSPVFREYALNLCRRMAEHYKGNPYVVAWHVSNEYGCHNRFDYSDDAMRAFQK WCKKRYKTIDAVNEAWGTAFWAQHMNDFSEIIPPRYIGDGNFMNPGKLLDYKRFSSDALK ELYIAERDVLESITPGLPLTTNFMVSAGGSMLDYDDWGAEVDFVSNDHYFTPGEDHFDEV AYAASLMDGISRKEPWFQMEHSTSAVNWRPINYRAEPGSVVRDSLAQVAMGADAICYFQW RQSKAGAEKWHSSMVPHAGEDSQIFRDVCELGADLGRLSDEGLMGTKTVKSKVAVVFDYE SQWATEYTANPTQQVDHWTEPLDWFRALADNGITADVVPVRSDWDSYEIAVLPCVYLLSE ETSRRVREFVANGGKLFVTYYTGLSDENDHIWLGGYPGSIRDVVGVRVEEFAPMGNDMPG ALDHLDLDNGTVAHDFADVITSTADTSTVLASYKAERWTGMNEVPAIVANGYGDGRTVYV GCRLGRQGLAKSLPAMLGSMGLSDLAGDGRVLRVERADAAAASRFEFVFNRTHEPVTVDV EGEAIAASLAHVDDGRATIDPTGVVVLRR >gi|197324944|gb|DS990230.1| GENE 474 542632 - 543015 389 127 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1312 NR:ns ## KEGG: BBIF_1312 # Name: not_defined # Def: MalE-type ABC sugar transport system periplasmic component # Organism: B.bifidum # Pathway: not_defined # 1 127 1 127 127 209 94.0 3e-53 MNTGQGDKTWDEFYQDAKKIHTLGDNYYITSDTGVAGFYDSMTWLASATLFSTEGETVTI NLTGAPKVKARGIFGDYLGKSYTGNQKLSDGVAALGTGSEGLREGSGLHRQVTFAVKQSG VVMTGIR >gi|197324944|gb|DS990230.1| GENE 475 543158 - 544579 1528 473 aa, chain + ## HITS:1 COG:BH1924 KEGG:ns NR:ns ## COG: BH1924 COG1653 # Protein_GI_number: 15614487 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport system, periplasmic component # Organism: Bacillus halodurans # 33 395 33 392 426 125 26.0 1e-28 MTISARLRRLRLRISALLTICAMTLAVASCGQPDTRTVITVWSWEPSMTTLIADFEKANP DVRVKLNNISGYDHLNSAIQDGYGTPDVVQLEYYALPQYAVSGQLMDLTGRVGSYSSFFT PGTWASVQLAQRTYALPMDSGPMVFFYNDDAFRQAGVDATKITTWDDYYEAAKKLKNIGV YIAADAGDASFYNAMIWLAGGRPFHTSSDGKTVTVDLKGDAGTRTFTEFWQRMIDEGLVN THLKVWSEDWKRALGGGSVASVFAGAWMPSLLLADVPGTSGLWRVTRMPTQDGTVTNAEN GGSALGVLHTTRKPEAAFRFVDYVCHNKSGIKTRVDGGAFPADNATLNSGEFLNKTTVTS EHHVEVEYFGGQRFNEVLSEAAESVSVGYQYLPFEVYARSHFRSATADAYTWSAAKQAYD RAKARKDAGLTNDDGGPITLPDRPGKKITLMSGIAAWQRDLKEYGVNQGFTIK >gi|197324944|gb|DS990230.1| GENE 476 544641 - 545411 1088 256 aa, chain - ## HITS:1 COG:lin0253 KEGG:ns NR:ns ## COG: lin0253 COG1521 # Protein_GI_number: 16799330 # Func_class: K Transcription # Function: Putative transcriptional regulator, homolog of Bvg accessory factor # Organism: Listeria innocua # 1 253 1 253 259 222 40.0 7e-58 MLVAVDIGNTNIVLGFLDGDDIIGTYRITTKSNHTSDEYGLMITQFLALSGLRPSDIDDV IIASVVPKVMHSFRASIIKFLNINPMVVGPGIKTGINIRIDDPKSLGSDCLADCVGAYYT YGGPVLVADFGTATTFNYVNDEGVITCGLITTGIRTAAAALWGETAQLPEVEITKPKSIL ATGTKTAMQAGLYYNFLGGIERTIRQFRMELDEPFTVVATGGLGRVFKDDTELIDVYDPE LIFKGMALIHSRNSHR >gi|197324944|gb|DS990230.1| GENE 477 545590 - 547260 2596 556 aa, chain + ## HITS:1 COG:Cgl2268 KEGG:ns NR:ns ## COG: Cgl2268 COG0747 # Protein_GI_number: 19553518 # Func_class: E Amino acid transport and metabolism # Function: ABC-type dipeptide transport system, periplasmic component # Organism: Corynebacterium glutamicum # 62 549 12 491 503 242 34.0 1e-63 MTENHGAHGDAGATDNEDLNTQETAATNESAAASMDAQLESRAKNAAGHRRATWWIVAIV AVIAVVAVVAGCIAAFAGRKNDTTGAKANDTVTIGLKLAPTNLDIRNTAGSAIDQVLIGN VYEGLVARDEHNQVVPAIAKTWDVSDDGTTYTFHLNDGMTFSNGDKLDADDVAWSINGLV TKQYHDADSLVNFVSVKASDPNTVELKLSAPYANLLWVLTGRPGLVFDKDAKYDAKTQAI GSGPYTVEKFVTNSSITLKANPNYWGANKAKTDTVVVRYFTDDNAAVNALKSGDVQVLAP ISENLAEPFTKDSDHYVVKAGDDTDKFVLAFNGTGAKTSDKRVRQAIRYAINHKEIIAAR GGSDTALGGPIPSLDPGYEDLTGIYPYDLDKAKSLMSEAGYSESKPLQLSLTYANIYGTE IGDQLRSQLKKIGIDLKVNVVEFSTWLQDVYTNRNYDISLVDHNESHDFYQWADPTYYYN YDNKEVQALYAKAVAATNDDDRDKLLAEAARKVSEDAPADWLFNYRVTTAYAKGVTGFPI NLNQTLLPLYNVAYTK >gi|197324944|gb|DS990230.1| GENE 478 547358 - 548335 1107 325 aa, chain + ## HITS:1 COG:AGl857 KEGG:ns NR:ns ## COG: AGl857 COG0601 # Protein_GI_number: 15890544 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 317 5 314 316 174 34.0 2e-43 MRFVIRRLLLFAAALFGISIVVFAALRVLPGDVASVMAGLNSPPERVAALRSQLGLDRPL IAQYADWIGALLHGDFGTSILTGRSISAQVGERASVTFPLIVLGLLIAMGLGIPLGCEAT LARSRAARGMFHMVAIIGGAVPALWGGLLLILLFSRGTGLIGVFPSQGFPQGGWSDFGSA LMSLVLPACSVGIIVGAGLMRYTRSALGGLASSGYIDMAMSCGMTRRQAVLRVGLRLAMP QLVSVIGLTFAEMVTGVMVIENLFALPGIGNGLVTDVGNRDLIAVQSELFMLAAFFLLIG LLVDLLHRVLDPRLKSADDVTEVNA >gi|197324944|gb|DS990230.1| GENE 479 548479 - 549306 885 275 aa, chain + ## HITS:1 COG:AGl321 KEGG:ns NR:ns ## COG: AGl321 COG1173 # Protein_GI_number: 15890272 # Func_class: E Amino acid transport and metabolism; P Inorganic ion transport and metabolism # Function: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 44 265 84 305 308 142 37.0 9e-34 MWGHVAGKFSLIVLGLWLASSAVSLVWTPYSLWSTDGYHVWAKPSRDHWLGTDGTGADVF SWLLAGSRTNLLVVVLTVAVAAVFGLAIVALMVSRHAALSAVSVVVVDALISIPTVLIAL ILAVPLGPSVAVIVIACGFGYGLNLARVSRPQAMLAARSSYVESALSNGASGLNVLARHI LPNISPVLTVQLSLSAGTAVLAESGLTYLGIGVPSGVPSWGHSLATSVKFINVYPLTVLW PGLIVTLVVVALNLFGDALRDAADPLTNPRLRGAR >gi|197324944|gb|DS990230.1| GENE 480 549303 - 550103 234 266 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163803615|ref|ZP_02197481.1| 50S ribosomal protein L34 [Vibrio campbellii AND4] # 3 246 2 239 245 94 26 6e-18 MSVTVRDLNIAIGGAPIVRGVDLDIADAQRVGLVGASGSGKSMISKAMLGLLPTHAVVSG SVVMGGMETVGTDDRRLADIRGRYAGMVFQNPAASLNPVMSVEKQVGLPLRLHYDLTAVE RRERVRAMIRKVGLPDDVLGKFPHELSGGQQQRVGIATALITSPRFIIADEPTTALDSIT QRQIVRLLVSLVDDMGASLLFITHDFAVLAHATTHCYVLDEGRIVESGRTADVLASPRDE RTRRLVGAARELTLHAGDAGDKEQSS >gi|197324944|gb|DS990230.1| GENE 481 550142 - 550960 392 272 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163765018|ref|ZP_02172066.1| ribosomal protein L9 [Bacillus selenitireducens MLS10] # 29 269 28 264 329 155 37 3e-36 MTEPSTSGSERKLDRPAVVLGARSICKSFGRRAAAHQVLFDVDVDVYEGECLAVIGGSGS GKSTLTRIMLGLGNADGGTVEYRGTPVLRGGSGLRRLRHDSGLIYQDPYGSLDPRWTVGD IVAEPLSLRRRGSRPDPAGIRENVHAALERVGLDAGVFIDRYPMDLSGGQAQRVAIARAI ITEPDVILADEPMSAIDVPARLQILETFAAIRQARPSTALIMVSHDLGVVQHIADRILVL HDGHVVEVGSTASILGDPKSEYTVRLIEAASL >gi|197324944|gb|DS990230.1| GENE 482 550997 - 551998 1243 333 aa, chain - ## HITS:1 COG:MA1334 KEGG:ns NR:ns ## COG: MA1334 COG0111 # Protein_GI_number: 20090195 # Func_class: H Coenzyme transport and metabolism; E Amino acid transport and metabolism # Function: Phosphoglycerate dehydrogenase and related dehydrogenases # Organism: Methanosarcina acetivorans str.C2A # 39 332 19 312 319 155 33.0 1e-37 MNERNIIETQPERTDLPLIVIPVIVESMIEPFAANFPLLHDIARIRMHCDFTLDTDTILE RTKDAEAVIVIGFHITDDILDAMTVRGHVSCFAFGGTGVASYINLPVARERGIRVCNVVH YGDHAVAEHAFALIMELARQVGRLDEQVRRGDWGGIDGIGLHGKKLGLVGFGGIGRTVAR IANGFGMKTLVWNSHVHGIDGLDITLIDDMDEVFAHSDIISLHLPLLDGTAGIITSRQLD RMRPGSMIVNTARAEIIEPGALTRRLQRGDVRAAIDVFDHEPLPMDDPLRSLDNVVLTPH VAWRDDEACVNLTRQVIDAVASYFTGGDYNAVP Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:27:04 2011 Seq name: gi|197324943|gb|DS990231.1| Bifidobacterium bifidum NCIMB 41171 supercont2.3 genomic scaffold, whole genome shotgun sequence Length of sequence - 137448 bp Number of predicted genes - 112, with homology - 100 Number of transcription units - 79, operones - 16 average op.length - 3.1 N Tu/Op Conserved S Start End Score pairs(N/Pv) 2 2 Tu 1 . - CDS 1084 - 2349 1688 ## COG1171 Threonine dehydratase - Prom 2515 - 2574 1.7 3 3 Tu 1 . - CDS 2606 - 3058 404 ## COG0590 Cytosine/adenosine deaminases - Prom 3098 - 3157 2.7 + Prom 3069 - 3128 3.4 4 4 Tu 1 . + CDS 3216 - 3962 798 ## COG0400 Predicted esterase - Term 3856 - 3896 -0.7 5 5 Tu 1 . - CDS 3996 - 6065 2415 ## COG0025 NhaP-type Na+/H+ and K+/H+ antiporters - Prom 6101 - 6160 2.6 - Term 6170 - 6205 7.1 6 6 Tu 1 . - CDS 6235 - 6579 101 ## + Prom 6264 - 6323 1.7 7 7 Tu 1 . + CDS 6442 - 7023 882 ## COG0717 Deoxycytidine deaminase + Term 7048 - 7100 13.1 8 8 Tu 1 . - CDS 7115 - 9394 1883 ## COG3345 Alpha-galactosidase - Prom 9433 - 9492 2.8 - Term 9486 - 9532 6.4 9 9 Tu 1 . - CDS 9561 - 12512 4202 ## COG0474 Cation transport ATPase - Term 12582 - 12621 3.1 10 10 Tu 1 . - CDS 12723 - 12890 105 ## BBIF_1756 hypothetical protein 11 11 Tu 1 . + CDS 13132 - 14139 465 ## PROTEIN SUPPORTED gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 + Term 14264 - 14300 1.3 - Term 14178 - 14222 12.4 12 12 Op 1 . - CDS 14250 - 15665 1620 ## BBIF_1758 lipopolysaccharide kinase (Kdo/WaaP) family protein 13 12 Op 2 . - CDS 15656 - 16411 101 ## BBPR_1819 hypothetical protein - Prom 16436 - 16495 2.1 - Term 16438 - 16483 -0.1 14 13 Tu 1 . - CDS 16500 - 17483 513 ## COG3764 Sortase (surface protein transpeptidase) - Term 17495 - 17554 9.8 15 14 Op 1 . - CDS 17564 - 19231 1953 ## BBPR_1821 cell surface protein 16 14 Op 2 . - CDS 19221 - 26930 6706 ## BBIF_1762 cell surface protein with LPXTG anchor + Prom 27406 - 27465 4.5 17 15 Tu 1 . + CDS 27546 - 28097 520 ## BBPR_1823 integrase, catalytic region + Term 28174 - 28205 3.1 - Term 28157 - 28198 11.1 18 16 Tu 1 . - CDS 28285 - 29412 1682 ## COG3839 ABC-type sugar transport systems, ATPase components - Prom 29560 - 29619 2.8 19 17 Tu 1 . - CDS 29868 - 30989 447 ## BBIF_1766 hypothetical protein 20 18 Tu 1 . + CDS 31330 - 33801 1561 ## COG0515 Serine/threonine protein kinase + Term 33815 - 33865 2.3 21 19 Tu 1 . + CDS 33952 - 34926 1556 ## COG1651 Protein-disulfide isomerase + TRNA 35115 - 35188 77.0 # Thr TGT 0 0 + Prom 35114 - 35173 76.2 22 20 Op 1 . + CDS 35212 - 35391 360 ## 23 20 Op 2 4/0.000 + CDS 35545 - 37077 1717 ## COG3583 Uncharacterized protein conserved in bacteria 24 20 Op 3 6/0.000 + CDS 37098 - 38039 993 ## COG0030 Dimethyladenosine transferase (rRNA methylation) 25 20 Op 4 . + CDS 38036 - 39076 686 ## COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 26 20 Op 5 . + CDS 39118 - 39744 925 ## BBPR_1831 hypothetical protein + Term 39782 - 39831 12.4 - Term 39625 - 39675 4.5 27 21 Tu 1 . - CDS 39836 - 41263 1896 ## COG0617 tRNA nucleotidyltransferase/poly(A) polymerase - Prom 41285 - 41344 2.5 28 22 Op 1 . + CDS 41340 - 41993 635 ## COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes + Term 42007 - 42043 3.1 29 22 Op 2 . + CDS 42074 - 44269 2354 ## BBIF_1775 hypothetical protein 30 22 Op 3 1/0.188 + CDS 44266 - 48681 3207 ## COG0728 Uncharacterized membrane protein, putative virulence factor + Term 48704 - 48745 9.5 31 23 Tu 1 . + CDS 48931 - 50040 569 ## PROTEIN SUPPORTED gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 32 24 Op 1 25/0.000 - CDS 50508 - 51872 786 ## COG1475 Predicted transcriptional regulators 33 24 Op 2 . - CDS 51876 - 52859 100 ## COG1192 ATPases involved in chromosome partitioning 34 24 Op 3 . - CDS 52915 - 53124 201 ## + Prom 53012 - 53071 4.0 35 25 Tu 1 . + CDS 53188 - 53295 63 ## 36 26 Tu 1 . + CDS 53422 - 53910 197 ## 37 27 Op 1 16/0.000 - CDS 54018 - 54548 488 ## COG1847 Predicted RNA-binding protein - Term 54582 - 54622 3.2 38 27 Op 2 18/0.000 - CDS 54630 - 55640 1174 ## COG0706 Preprotein translocase subunit YidC 39 27 Op 3 . - CDS 55653 - 55949 199 ## COG0759 Uncharacterized conserved protein - Term 56227 - 56264 -0.4 40 28 Tu 1 . - CDS 56343 - 56477 225 ## PROTEIN SUPPORTED gi|224283951|ref|ZP_03647273.1| Ribosomal protein L34 + Prom 56662 - 56721 4.0 41 29 Tu 1 . + CDS 56830 - 58419 1691 ## COG0593 ATPase involved in DNA replication initiation 42 30 Op 1 18/0.000 + CDS 59021 - 60145 1382 ## COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) 43 30 Op 2 5/0.000 + CDS 60233 - 61546 1034 ## COG1195 Recombinational DNA repair ATPase (RecF pathway) 44 30 Op 3 5/0.000 + CDS 61543 - 62115 394 ## COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 45 30 Op 4 24/0.000 + CDS 62266 - 64428 2367 ## COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit + Prom 64476 - 64535 1.6 46 30 Op 5 . + CDS 64563 - 67295 3248 ## COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 47 30 Op 6 . + CDS 67355 - 67912 632 ## BBIF_0006 hypothetical protein + Term 67943 - 67985 7.5 - Term 68192 - 68247 6.4 48 31 Tu 1 . - CDS 68275 - 68529 262 ## BBIF_0007 alpha-L-arabinofuranosidase 49 32 Tu 1 . + CDS 68555 - 69091 240 ## BBIF_0008 hypothetical protein + Term 69243 - 69305 7.5 - Term 69409 - 69451 12.3 50 33 Tu 1 . - CDS 69508 - 70422 1308 ## BBIF_0009 hypothetical protein 51 34 Tu 1 . + CDS 70502 - 70732 67 ## - Term 70524 - 70564 1.0 52 35 Op 1 . - CDS 70684 - 71889 1213 ## COG1609 Transcriptional regulators 53 35 Op 2 . - CDS 71889 - 72182 62 ## 54 36 Tu 1 . + CDS 72181 - 73332 1093 ## COG2267 Lysophospholipase + Term 73427 - 73459 0.1 55 37 Tu 1 . - CDS 73381 - 73743 254 ## BBIF_0012 hypothetical protein 56 38 Tu 1 . + CDS 73933 - 74247 400 ## BBPR_0020 hypothetical protein + Term 74369 - 74420 -0.9 - Term 74670 - 74722 18.2 57 39 Op 1 . - CDS 74769 - 76115 2134 ## COG0334 Glutamate dehydrogenase/leucine dehydrogenase - Prom 76150 - 76209 5.3 58 39 Op 2 . - CDS 76219 - 76965 564 ## COG2186 Transcriptional regulators 59 40 Tu 1 . + CDS 77073 - 77507 711 ## COG1970 Large-conductance mechanosensitive channel - Term 77688 - 77730 8.2 60 41 Tu 1 . - CDS 77882 - 81379 3878 ## COG3534 Alpha-L-arabinofuranosidase - Prom 81455 - 81514 4.2 - TRNA 81641 - 81713 89.3 # Ala TGC 0 0 - TRNA 81784 - 81857 89.9 # Ile GAT 0 0 - Term 81740 - 81770 1.0 61 42 Tu 1 . - CDS 81969 - 82136 62 ## 62 43 Tu 1 . + CDS 82097 - 84466 1540 ## COG3525 N-acetyl-beta-hexosaminidase + Term 84572 - 84611 9.1 63 44 Tu 1 . - CDS 84373 - 84771 236 ## 64 45 Tu 1 . - CDS 84941 - 85993 977 ## COG1609 Transcriptional regulators - Prom 86157 - 86216 6.5 + Prom 86182 - 86241 3.6 65 46 Op 1 13/0.000 + CDS 86323 - 86772 735 ## COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 66 46 Op 2 11/0.000 + CDS 86896 - 87168 477 ## COG3414 Phosphotransferase system, galactitol-specific IIB component 67 46 Op 3 . + CDS 87234 - 88751 2103 ## COG3037 Uncharacterized protein conserved in bacteria + Term 88781 - 88828 15.3 + Prom 88938 - 88997 16.5 68 47 Tu 1 . + CDS 89114 - 89863 288 ## COG1451 Predicted metal-dependent hydrolase + Term 89911 - 89964 12.2 - Term 89898 - 89952 14.0 69 48 Tu 1 . - CDS 90050 - 90529 818 ## COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) - Prom 90559 - 90618 3.2 70 49 Tu 1 . - CDS 90859 - 91026 80 ## + Prom 90798 - 90857 2.2 71 50 Tu 1 . + CDS 90972 - 92045 646 ## COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily 72 51 Tu 1 . - CDS 92081 - 93403 1856 ## COG1253 Hemolysins and related proteins containing CBS domains - Prom 93463 - 93522 1.8 73 52 Tu 1 . - CDS 93612 - 94187 593 ## COG1609 Transcriptional regulators 74 53 Tu 1 . - CDS 94304 - 95053 677 ## COG0288 Carbonic anhydrase - Prom 95291 - 95350 2.6 75 54 Tu 1 . + CDS 95270 - 95833 875 ## COG0450 Peroxiredoxin 76 55 Tu 1 . + CDS 96176 - 98089 2003 ## COG0492 Thioredoxin reductase + Term 98090 - 98123 -1.0 + Prom 98097 - 98156 6.7 77 56 Tu 1 . + CDS 98198 - 99844 932 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 99881 - 99930 3.4 - Term 99964 - 100000 7.7 78 57 Tu 1 . - CDS 100133 - 101419 1804 ## COG0477 Permeases of the major facilitator superfamily - Prom 101545 - 101604 4.5 - Term 101748 - 101789 12.1 79 58 Op 1 . - CDS 101917 - 104673 3769 ## COG2352 Phosphoenolpyruvate carboxylase 80 58 Op 2 . - CDS 104752 - 105063 77 ## gi|313141137|ref|ZP_07803330.1| predicted protein 81 59 Tu 1 . + CDS 105084 - 107075 2590 ## COG2966 Uncharacterized conserved protein + Term 107113 - 107145 3.1 82 60 Tu 1 . - CDS 107148 - 107969 305 ## COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold 83 61 Tu 1 . - CDS 108078 - 108239 260 ## BBIF_0040 amidohydrolase 3 + Prom 108721 - 108780 1.9 84 62 Tu 1 . + CDS 108816 - 109835 318 ## BBPR_0045 hypothetical protein + Term 109917 - 109975 9.7 85 63 Tu 1 . - CDS 110310 - 111407 1696 ## COG0180 Tryptophanyl-tRNA synthetase - Prom 111476 - 111535 3.2 + Prom 111404 - 111463 1.7 86 64 Tu 1 . + CDS 111533 - 111928 467 ## BBIF_0043 hypothetical protein + Prom 111943 - 112002 2.5 87 65 Op 1 . + CDS 112177 - 112689 450 ## COG3279 Response regulator of the LytR/AlgR family 88 65 Op 2 . + CDS 112771 - 113040 163 ## BBPR_0049 putative histidine kinase-related ATPase (EC:2.7.13.3) 89 65 Op 3 . + CDS 113022 - 113381 277 ## BBIF_0045 two-component sensor kinase 90 66 Tu 1 . + CDS 113625 - 114650 1011 ## COG1088 dTDP-D-glucose 4,6-dehydratase 91 67 Tu 1 . - CDS 114662 - 114877 311 ## Blon_2391 acyltransferase 3 92 68 Op 1 . + CDS 114993 - 117569 2296 ## COG2730 Endoglucanase 93 68 Op 2 . + CDS 117592 - 117672 100 ## - Term 117579 - 117628 2.1 94 69 Tu 1 . - CDS 117642 - 118592 1122 ## COG0463 Glycosyltransferases involved in cell wall biogenesis 95 70 Tu 1 . + CDS 118960 - 121149 1417 ## BBIF_0050 hypothetical protein 96 71 Op 1 . + CDS 121257 - 122279 1414 ## COG1088 dTDP-D-glucose 4,6-dehydratase 97 71 Op 2 1/0.188 + CDS 122287 - 123963 209 ## COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen + Term 124007 - 124038 -0.5 + Prom 123978 - 124037 1.9 98 71 Op 3 . + CDS 124077 - 125525 2065 ## COG1091 dTDP-4-dehydrorhamnose reductase + Term 125575 - 125621 12.1 - Term 125560 - 125612 17.0 99 72 Tu 1 . - CDS 125731 - 125997 209 ## BBIF_0054 transposase 100 73 Tu 1 . + CDS 126057 - 126275 82 ## BAD_1377 insertion element IS6110 hypothetical protein + Prom 126577 - 126636 80.3 101 74 Op 1 . + CDS 126857 - 127618 635 ## BBIF_0056 transposase 102 74 Op 2 11/0.000 + CDS 127525 - 127869 437 ## COG2801 Transposase and inactivated derivatives 103 74 Op 3 . + CDS 127909 - 128256 346 ## COG2801 Transposase and inactivated derivatives 104 75 Tu 1 . - CDS 128219 - 129046 712 ## COG3328 Transposase and inactivated derivatives - Prom 129091 - 129150 1.7 + Prom 129275 - 129334 2.8 105 76 Op 1 . + CDS 129382 - 130275 1408 ## COG1209 dTDP-glucose pyrophosphorylase 106 76 Op 2 26/0.000 + CDS 130315 - 131130 658 ## COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component 107 76 Op 3 . + CDS 131142 - 132344 647 ## COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component 108 76 Op 4 . + CDS 132375 - 134033 429 ## BBIF_0061 hypothetical protein 109 76 Op 5 . + CDS 134064 - 136052 1721 ## COG3754 Lipopolysaccharide biosynthesis protein + Term 136066 - 136134 33.4 110 77 Tu 1 . - CDS 136129 - 136533 212 ## BBIF_0063 glycosyltransferase involved in cell wall biogenesis - Prom 136629 - 136688 1.6 + Prom 136717 - 136776 3.3 111 78 Tu 1 . + CDS 136858 - 136980 57 ## gi|224284012|ref|ZP_03647334.1| hypothetical protein BbifN4_09336 112 79 Tu 1 . - CDS 137280 - 137447 163 ## Predicted protein(s) >gi|197324943|gb|DS990231.1| GENE 1 169 - 921 945 250 aa, chain + ## HITS:1 COG:TM0490 KEGG:ns NR:ns ## COG: TM0490 COG0846 # Protein_GI_number: 15643256 # Func_class: K Transcription # Function: NAD-dependent protein deacetylases, SIR2 family # Organism: Thermotoga maritima # 7 244 19 242 246 174 37.0 1e-43 MKHIAVLTGAGISTSAGIPDFRGPDGVWTKHPEQMSVYDIDSFLSDKEEREYSWRWQKES PVWNARPGAAHKALVKLEKAGMLTLLATQNFDALHEKAGNSPDVIVNLHGTIGTSHCMKC HAKYDTADIMARLDEEPDPHCHRTLPYSGGMPCNGLIKTDVVYFGEALPDGAMEKSYKLA SRADELWVIGSTLEVYPAASIVPVAAQAGVPITIMNMGRTQCDRLASRLIRDDIAVALPK LVDETISAAQ >gi|197324943|gb|DS990231.1| GENE 2 1084 - 2349 1688 421 aa, chain - ## HITS:1 COG:FN1411 KEGG:ns NR:ns ## COG: FN1411 COG1171 # Protein_GI_number: 19704743 # Func_class: E Amino acid transport and metabolism # Function: Threonine dehydratase # Organism: Fusobacterium nucleatum # 21 420 10 399 404 324 44.0 2e-88 MEQKDVLKALQRDHAAELKLAAKRLKGTARHTEIIPSRTLSELTGHEILLKPENLQVTGS FKIRGAYNKIASLSEEQIARGIVTASAGNHAQGVAYAARERHAKATICMPQITPPLKVDA TKAYGADVVLYGDVFDEAAAHAAELASTQGMIYVPPFDDYEVICGQGTIGLEILEDVPNV TDVVVPLGGGGLGAGVALAIKTFKPEARVIGAIPEGSPAWKNSFAAGRVTEADQVVTSAE GVAVKHPGDLPFALLNEFMDDLVTVTERDINEMILLMLEKHKLVIEAAGAVSLAALEHLN LRSRKFASATGPHVVVPIMSGGNIDTVTMGAVIQKGMIARGRIMNFEVELPDTPGQLVKV AQLLARERANVIALDHDQFKASGHYTNAVSLGVTVETNGPDHIDHILMALKEAGFQPKRI Y >gi|197324943|gb|DS990231.1| GENE 3 2606 - 3058 404 150 aa, chain - ## HITS:1 COG:Cgl0229 KEGG:ns NR:ns ## COG: Cgl0229 COG0590 # Protein_GI_number: 19551479 # Func_class: F Nucleotide transport and metabolism; J Translation, ribosomal structure and biogenesis # Function: Cytosine/adenosine deaminases # Organism: Corynebacterium glutamicum # 17 150 25 159 159 137 54.0 7e-33 MGELDEAMCEAIALGERAGKQGDVPVGAVVLDERGTVIGRGRNRREAGHDPLAHAEIEAM REAAQARGDWNLADCTLVVTLEPCPMCAGACIQTHIGRIVFGAWDAKLGACGSIWDIPRD PHVGHVPQVVGGVREAACARLLTGFFASRR >gi|197324943|gb|DS990231.1| GENE 4 3216 - 3962 798 248 aa, chain + ## HITS:1 COG:lin0589 KEGG:ns NR:ns ## COG: lin0589 COG0400 # Protein_GI_number: 16799664 # Func_class: R General function prediction only # Function: Predicted esterase # Organism: Listeria innocua # 44 238 19 206 219 61 26.0 1e-09 MGEEAAHDTTRRLSDVIPGRFGDPVSVQYAWMSPENAEAMPTRPLFLALHGWGSNERDIA GIMQYIAPYNDVVSLRAPLVLHAPEGVSAGAYSWFHDAVPSGDDLDHDIAAAARAVDQWV DGHIPATRDVVPIGFSQGGAVAVHLLRMHPERYRAVINLSGFLAPAGVPGTAPADDRLTD FEIPVYFGYGKNDAVIPKYELFAAAAWLEEHTWLTTKSYRGLDHAVSLDEFSDIRQWLVL HDIASGVL >gi|197324943|gb|DS990231.1| GENE 5 3996 - 6065 2415 689 aa, chain - ## HITS:1 COG:lin0795 KEGG:ns NR:ns ## COG: lin0795 COG0025 # Protein_GI_number: 16799869 # Func_class: P Inorganic ion transport and metabolism # Function: NhaP-type Na+/H+ and K+/H+ antiporters # Organism: Listeria innocua # 1 678 1 669 682 359 36.0 1e-98 MEVFQLILCIIGVVVFSSFASRFIPKVSTPLVQIAMGAIITQVPGFPNASLNPELFMVLF IAPLLYLEAHEIDKSELLKSLKLSLSLAIGLAIATMVAVGVIVHAVWPSVTLAAALALGA ALGPTDAVAVSSLGKEASLSLRQLGVLKGESLFNDASGIVGFQFAIAAAITGEFAIGRAA GEFALSFIGGAVYGLVIALLANWLFETVRSLGWETTTTRILMELFLPFMLYLTAEELHVS GILAVVASGLFVRFDRTGIGPNVARTNIVSSSVWGVLSFSLNGAVFILLGMQLPKAMSAS WDDPGVSNVRLSIVILLVSLVVVTMRFLWVAGMLRLARDVNTGKRRKMTPARWRSAAVMT FGGAKGTITLSLMFTIPFTVTWGVPFPMRDELIFIASGVIVVTLLLANFMLPLLAPNRDR MAPEMTEITIEILRKTVEELTGRVDDENRRAVLMVIESYTKRITRLKQRVGESDPQGLER LQIEALHWEKDYLKSLLAELKMHPLDDAAEQDMRVEACERMMDDIMNTLRHTSTDSSSGH AVSQIRGRMRAFERRAENLGRRISSKIRRTTPLISEDEMFTHSRLLQLDVMEHVVDRLYE EMGRGTYRTEHCSALILDYRRAEGALKSRPNMGGSAKAIAQAEEIKRESYGIELGIIQDM LEAGDITRAQAKALRRNVFVMSVDADSSI >gi|197324943|gb|DS990231.1| GENE 6 6235 - 6579 101 114 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MIVEQAEETVEAHVNRRGLHHFRSPWVKRNMTVLLGGENVAVGQQHEDSPFRAHVYGARR HTTVYSHYHVMGFSPRHQLTGSFQTISALHQETGVLLLTVSTSRPGIGSTILNN >gi|197324943|gb|DS990231.1| GENE 7 6442 - 7023 882 193 aa, chain + ## HITS:1 COG:ML2507 KEGG:ns NR:ns ## COG: ML2507 COG0717 # Protein_GI_number: 15828356 # Func_class: F Nucleotide transport and metabolism # Function: Deoxycytidine deaminase # Organism: Mycobacterium leprae # 1 188 1 188 190 257 65.0 8e-69 MLLSDRDILAAQKDGHISLDPWTPEMVQPASIDVRLDRFFRLFNNHAYTYVDPAENQGAL TEQFDVAPDEPWILHPGEFALGSTWEYVKLDATVAARLEGKSSLGRLGILTHSTAGFIDP GFEGHITLELSNVSTLPVKLWPGMKIGQMCFFQLSSPAEHPYGSKGTGSHYQGQRGPTPS RSYVNFYKADVND >gi|197324943|gb|DS990231.1| GENE 8 7115 - 9394 1883 759 aa, chain - ## HITS:1 COG:YPO1581 KEGG:ns NR:ns ## COG: YPO1581 COG3345 # Protein_GI_number: 16121851 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-galactosidase # Organism: Yersinia pestis # 107 753 69 701 708 381 34.0 1e-105 MSLIEQFHGAAADGTELTAIYAEQPAADVAFALVFAGHGLPRFVHWGRPLAAPGTVLAAY DALRPQRVSGALDETAWPSIMPTQSESWIGAPRLDIRRAGVTPFCAFTVTGIAIRQDERQ GVDVSDGVDGAAHTVTQQVPVVTVTASDAEQGVELSWTAELLPGGLIRQRTTLRNLPAGN LPTGDLEVGKVELGFPLPALATEILTTTGHHLRERSPQRQPLTEGRFEKVSMAGRPGFDA SLLLSAGEPGFGFEHGEVYSVHVGWSGNSVLSAERQPYTTGLIGGGEVLLGGEATLARGE TYTTPWLYGSYGDGLNEVAARFHDYVRSCHPDLAVKPRPVILNTWEAVYFDHDYDTLKAL ADKAGDSGVERFVVDDGWFGSRRDSTSGLGDWQIAQDVWPDGPKSLKALADYVHGKGMEF GLWFEPEMVNPDSDVARAHPDWVLRPTANRLPMQGRSQQVLDLTNPDAYRYIHDSIDALV GELGIDYIKWDHNKFVTEAVSPRTGRPAVHGQTLAVYRMFRDLEVAHPGLEIESCASGGG RIDLGILEFASRVWTSDCVDPVERADIQRYTSLLVPPCMMGEHVGASPAHSTHRATSQEM RMAMAFFGHMGVEWNLLKEPDEALNKLGEWVAEYKRHRAWFAIDTCVHADIADPAVRVDG MVKPDRSAAFYRFTQLTTSQTLPAAPIRVPGLDPDGTYRIQPLWLDLDLDGLGLGSGQSP LGWWTKDGVLMTGRALMTYGLRPPSLHPAQSVLFTAIRQ >gi|197324943|gb|DS990231.1| GENE 9 9561 - 12512 4202 983 aa, chain - ## HITS:1 COG:sll0672 KEGG:ns NR:ns ## COG: sll0672 COG0474 # Protein_GI_number: 16331945 # Func_class: P Inorganic ion transport and metabolism # Function: Cation transport ATPase # Organism: Synechocystis # 29 973 30 939 945 648 41.0 0 MVDHTNDQSTGVQSQEGLLHDVDPSLTEANEVAKALDVDTNTGLSSAEAQRRLEKFGPNQ LASAPPVPKWKKFLAQFQDPLVYLLLAATVISLIAWFIERSHGTAGEVLPFDAIVIILIL IVNAVLGYIQEARAEQAVEALAQMTAPQTSVLRDGKIVHINTADVVPGDIVVLGEGDTVS ADGRLFAAASLRIAEASLTGESVPVGKKPDTLDSAKALGDRTNMIFNGTSVTQGTGRAIV TGTGMNTQVGKIADMLSQTDDEDTPLQKEMTHVSKILGIAVCIIAAVVLVALFITQGFHK MPDDLIDSLLLAVSLAVAAVPEGLATILTVVLALGVQRMAKHNAIVKKLSSVETLGSASV ICSDKTGTLTRNEMTVERIVTPSGEVQLTGTGYEPKGKMLGMGGDAIEESAPVNAEALRT IAVGAFANDGDLRQNDAGQWEIVGDPTEVSLVVASRKIKADRALGKLDRVAEVPFTSERK RMAVIGKDSSDNGNLSVYAKGAPDVLLGYCTRIAVGEAVRPMTEGDRQEILATVERLSGE AYRTLGEAYRPLGTTSLADIPGIKTNAAGQVTDISEQSDVIERDLIWAGMVGIIDPPRTE VRDSVAEAHRAGIRTVMITGDHPLTAARIASDLGIIEKGGKALTGDQLDAMPDEAAFDKA TSEVSVYARVAPEHKLKIVESLQRQGNIAAMTGDGVNDAPAVKSADIGVAMGITGTEVTK ESAKMILADDNFSTIVAAVREGRVIFDNIRKFLRYLLSSNVGEVFTVFGGVMLAGVLGIT QPGTTGVAVPLLATQLLWINLLTDAAPALAMGVDPQTDDVMARSPRKLTDRVIDRDMWID IAFIGIIMAAVTLIGMDMHLEGGLFTDRSIGGTHEFQMIEARTMGFTILVFAQLFNAIAS RSARQSAFVGLFSNKWLWGAIGLSVVLQLVVIYVPFLNSAFGTTPLGPWAWVECICLAAV VLIASEIYKAIMRAIDRKRGIMA >gi|197324943|gb|DS990231.1| GENE 10 12723 - 12890 105 55 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1756 NR:ns ## KEGG: BBIF_1756 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 18 55 1 38 38 66 92.0 4e-10 MQDRAVSFTPGEPEGLAMVDVSRECCERYFGMDDELFDYTMTTLRWLLALWERVA >gi|197324943|gb|DS990231.1| GENE 11 13132 - 14139 465 335 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|163764761|ref|ZP_02171815.1| ribosomal protein S11 [Bacillus selenitireducens MLS10] # 66 333 2 253 255 183 39 3e-45 MARMAIKKGPTKGSGGKHRNALRGKGPTPKAEDRVYHKAYKAKQATNRRKMADPRLAARR RAAKFTSDSDDLVIGRNAVLEALRVGVPSMQLYIATRIEHDDRTREIIKLAGAQSLHLLE ADRLEMDRIARSSNHQGVVLKVQPYQYSSLAELADIAERKAKAMDVVNSPSARINARPLF IALDGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHIPVARVVNL TKAIESMRERGYYTVGLDGGGDKLVGETGFETDPLIVVLGSEGKGLSRLVRESCDAIAGI PITSMVESLNASVAAGISLYAVARARREAAAAATK >gi|197324943|gb|DS990231.1| GENE 12 14250 - 15665 1620 471 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1758 NR:ns ## KEGG: BBIF_1758 # Name: not_defined # Def: lipopolysaccharide kinase (Kdo/WaaP) family protein # Organism: B.bifidum # Pathway: not_defined # 1 471 1 471 471 872 100.0 0 MELNDLPQMDPRALKATSVKAEDEHASSAEPQALKITAASSNPKMFTLPWHKPLATWPED LLANLPRGISRHVVRFVHVGDEVYAMKEITRQVAEREYEILRRLQKLELPTVIPIAVVTG RHDRNGEPLEAILVTRHLKFSLPYRALFARNLQPDTAERLIDALAVLLVRLHLAGFYWGD VSLSNVLFLRDADAFSAFLVDAETGDLQVQLTDGQREYDIDLARTNIIGELMDLASGRLL PSDVDEIEVGNRLVDRYHSLWSTLTDTDKFGPDEMWKIEQRVNKLNDLGFDVDELEMKTA EDGKRVLVRPRVVDAGYASRKLLRLTGLDVQENQARRLLNDLDAYRASTWREGEELEIVA TDWMREVYEPTVRMIPREYRSQIEPAQFFHEVLDHRWFLAEKAGHDVPMGEAVESYIQSV LPNYKLDDKAVNELNAEADSGVVDDEANYEKPIDDDDYNPDDDPDAAVWSH >gi|197324943|gb|DS990231.1| GENE 13 15656 - 16411 101 251 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1819 NR:ns ## KEGG: BBPR_1819 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 251 36 286 286 400 99.0 1e-110 MVPYAQADSFGALTINAVWGRDTASPKLLAGDTYSIVRVATVTTNNDGSVSSYKTVGDFS GLTADWERLTSSEYHDAAKKLATHAAKNKLYQHSGTTNVAGQLTFQNLPLGLYLVSRTSS AKANKAYDCDPFLISIPGSGGTSADLNITVEPKFSTGTPVVPPENNPSEEPGNPGLIGRT GAAVGSIAAAAGLMLLVAFILFRLRMRRRIRDVNSAGKSHTDDLFVCENNAPKSPLLAAL PKHHVESNTWS >gi|197324943|gb|DS990231.1| GENE 14 16500 - 17483 513 327 aa, chain - ## HITS:1 COG:SP0466 KEGG:ns NR:ns ## COG: SP0466 COG3764 # Protein_GI_number: 15900382 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Sortase (surface protein transpeptidase) # Organism: Streptococcus pneumoniae TIGR4 # 17 283 1 261 279 194 37.0 2e-49 MKRLRNILPVLVILGGMLILFYPTISNFLIMRNASRAVNNYDASVEALSQEQYQKVLDAA HAYNEKLAQNDAGETDALASAVNSASTDEEYNSLLNIDGDGMMGYITVPKLEETLPIYRG TSEKVLQSGIGHLEQTSLPVGGASTHAALSGHRGLPTAKLFTDLNLMKKGDKFYITILKD TYAYQVDKITTVLPTDTKQLAIEPGEDLVTLITCTPYAVNTHRLLVRGHRIPYTPQQQDD AKSTFHVDIPLQYLLPSLALIALLIAWHLWQRHERRRRQSGSAKVASGDSDSADIEPDGD LPPQPDSTNNQSHSSRRKGPGRHVRPA >gi|197324943|gb|DS990231.1| GENE 15 17564 - 19231 1953 555 aa, chain - ## HITS:1 COG:no KEGG:BBPR_1821 NR:ns ## KEGG: BBPR_1821 # Name: fimA # Def: cell surface protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 26 555 1 530 530 603 82.0 1e-171 MPRDDHIDKPYLPNRKDFHLEKGTVMKSLMKKVFAAAAAIATVFGLAATTVATANAAGGN ATLTVSTKDAKFAGKTVNAYKMFSATVSGDGGAVSHTLNDAWKPFFKNSVGLTDVTDANV NDKANDYVSKLKDSALTAFAAKASNWAQNTANSITADATATVSKIAATDGKYTATFTGLD YGYYVVAVPGATVADTNSQYAALVRVHSTTVSVDIKGALPTVDKKVQVDGTGKDATDAKI GDTLKFTLTSTIPDMSAYNTYTFNFKDTLSKGLTFGQVDSVKVGDTALTTDTDYTVATAP ADNGKTLLTVTMKNFKNQQANVGKKITVTYTATLNKDAVVGGAGNVNSATIQYSNNPSTN GTGESEPSKVRVFTYGFTVDKYTGKNYDDTATRLAGAEFTLAHKGGTAISFVKVADSATQ NAVYRVAKADEAGATTTITTPANGKVDFRGLENGEYTLTETKAPAGYNKLASAIGVKVDG QNNGTDTTHATVVITYNNDNGNDYNQTASNGVIPVQNKSGAILPGTGGMGTIAFTVIGVL VIALGVAWTLKRKNA >gi|197324943|gb|DS990231.1| GENE 16 19221 - 26930 6706 2569 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1762 NR:ns ## KEGG: BBIF_1762 # Name: not_defined # Def: cell surface protein with LPXTG anchor # Organism: B.bifidum # Pathway: not_defined # 1 2569 1 2566 2566 4241 98.0 0 MQVAATALGGRDFEGQVTKEINGKPYILIGNEQQLRAIGSGKKVIGRINKVKQTCTRQGL GKYQWVDDGTPSSEYAGDADLSNSDTLRDADASDHDSPLLCSTRLDVGKTRTKYYGVGAD GTQTDYSAANTGLTYSADANYLIFRDIDLSKNAADTNNTEWTPLMFSGTMLGAVSNDGDT AASLWKAVGADGASVVHATAARPVISHVVVNQKDMVSNVKGDQLDVSKQQGIGFFASITN KTVMNSNSLGSAGTAVVSNLKLQDVSVTNHTSESYIPPTLLGMLTSAVGLLLDTLLKALK LLTFGQVDLDLNLQGLLTLHEKNPSNLATGAFAGRIYGDTKVTDCEVADVSVSSVSRMTG GFVGYVEGATRYDAVSGIVGALTNVLSKILNVIPFLGLGDLVDWLLSGTLGLNALIPVGY YNPVISNSSVNGFKKNVVIGNKDNPQAGGFVGAQIGAIIENSSVTSTNGFTVRATQYAGG FAGVSRNGNVGGLINSLGVDLLSALRPQSLIENSGLTINGDDKITVQAEDYAGGFNGAMA NAYAVNNSITASVAVTADGSHAGGFTGFASVGWGLELGTDDTTKASLLKQLTKAVTKLLS GSNNGAGELLSIVGVNPSVILGTQMKGSLTVKAGGDYAGGLVGEGSGTVIGDSSQNRLQK LTFWKYNNHRDFPQQRSTTIEGLESVTATGSYAGGIAGNLQPTTVAGLLNSVVKIGDIAT LKKFDQFAAFTVENMSVTAPASGLTVTAGSYYAGGAIGCATGGDVTHTNLTNLATVSARG EAGGFIGFSGPGDAIGAGGLNVLGLIKLSGLLSVAQYSSVAVTASNVNGISGGFTVAATG KNKNNETTDYAAGGFYGQANSTKTRESHVTNLKSVTADTSTSDGVAGGFVGFSTTGGLAD ALSNAEDSSVLDGLIKGGLLSVNDLLGAVPYLIPSYTDTTVTYVNGGYVEGDIAGGYAGN FQSGKVNQFSETDLKNDSTLAGVQSRVQTNPVAVVNLDHVTGGAYAGGFGGKVVSGALAS AGNGGLSLLGKFGTVDLANLLQVVQGYVPFISYAGVHSDATTVETTSGNKISDPDDPGFT VSATRFDQSDTQSGSAGGYIGYGSGVQVSHSSVTQLRRTDVKAPKNLETAGSIDDTYLSK DSSYAVTAARYAGGYIGKMDIGSAAAVGGGLRLLGQNVNLNDVLSVLDVVVSTIEHSDVT GGIGGYSVLASTADHRNANNEPDPLGMAGGFAGDIEGGHIQDSSSHEFVYIIGQVSAGGY VGAMQPGAVANVLGDGSVLKKLVNLDNLLSLVQDFTPTIRNSSTDAAVCGGAVRAQAASD TTTRRGMAGGYAGRNRGGHIWGNNTAAWKQENTDGKYNGPQRVAYAARIRSVYGAEIAGG YTGFMEAADTAQGGSLSLLGGLIKAGNLAGVLSVVHPTEEHSKVTGPLRNMSYDQWKTWV DNIGKYGAYGKEFTEVATGDGAGSVTDQDSLDKFLESYIFGFNVVAGRAEYQTGANLHDS GVAGGHVGLMRTGTITDGQSMDVKTVSAMRAAGGYAGTMESGSASSFGSIQLFGDKGIKL DLGQMLDVAQVFVPVVKSSSVAGYRKGMKVVATGEDITHGTGNAGGYAGLAVGGQIWGDL DQDGQKLVEGVTAAGANVSNLRKVEGRNNVGGFIGVATAGAVADVDTNASEGFLQGILDS LVSNPASLVSVLQATVTTIRGAHVSSDDPAWGYTVNGAYESKEDKGNTTTKYALNAGGFA GSLQAAILGDKDSAKGTGSEADPNNDPASLTVNGLRAVEGGQYAGGFFGLADISSVASVG GGAAGDKQDTNLLLKLLKVGNVGVLEAFRTFIYDGQVNGVSDGIQIVAHDSTTKGMLDSK RYTGAGGGFGGGLINGSVKQSAVTNLNSVTGVNYVGGFIGHLGKSGTVAADNAQLGTDAL NLLGATAGVLDIWGSHVGDSRVTGIPDGYTVTATHHGDNYGKATDKATGREVAGGFVGYV DLARVKGCASDNLKKVTSGEIAGGFVGETSRAYLVDAKVNSVLVELLLQVVNALVKLLYL DKAEQVGVIDLGKWFPAIFGKVFDLKVLSEGNVLYVNLFGLKVSVALSKADDENQQQTDV AIVTIGDSVIKLPCSKDGIDMNGSGSNLTVQLIKGNRTRVEQSTVTGIASGYDVFGGGAT QDTDGVKDLSTGYTGGFAGLNDEGVLADDHMVYADTIRGASGLVDPFSNTKLKSVWDFNA MSNILGPVDDGKGGKAYNTYRIYRKAAANASEARTSAQDGNKIFSQKNKADDALNTGLDR WEVKLFDVVNTYDSSAVHSSASGDAGTTWVGIKDAVVNSTDGSTKTKLDAYQSPAKAVLM LDATVTDNNGGLTPEPDDGQDPCGKDGCRTIDLTVQKIWKDGNLERPQSVELKIAAHYTD GSGNTVTPQTIQCFGADCTTVTQKNPWTVTLDSSDASSWSNTWRKVIQGLPVAFVDGQDA NGKDIVRYYTYTVEETAVTYKDGDTTKTIKPAEAGYQVSVSYNTKERVAIVTNAALLPDT GGAGTMWFLMFGLLLMGAGVVWYVRNQRVQSGTVRSGSSRIRKRGAHAS >gi|197324943|gb|DS990231.1| GENE 17 27546 - 28097 520 183 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1823 NR:ns ## KEGG: BBPR_1823 # Name: not_defined # Def: integrase, catalytic region # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 183 1 183 183 313 95.0 2e-84 MGKVYSHLSEEERQVIQIEVGNGTSVRKIARLLGRGPSGISREIRRNTWFPSNESESYRP YRPKRLKTGPWTGRYYIAGPAQRKADRRRAKPRKPYRLSFGRLWARVDEWPGRGWSPPPV SGIIRRCLPKRTIIEPGMARGLQEIVDETDNRPMRMLGHLTPAEAFADELLNLQDKQGCR TSK >gi|197324943|gb|DS990231.1| GENE 18 28285 - 29412 1682 375 aa, chain - ## HITS:1 COG:Cgl2410 KEGG:ns NR:ns ## COG: Cgl2410 COG3839 # Protein_GI_number: 19553660 # Func_class: G Carbohydrate transport and metabolism # Function: ABC-type sugar transport systems, ATPase components # Organism: Corynebacterium glutamicum # 1 374 1 375 376 429 61.0 1e-120 MAEVVFDHVTRIYPGNDKPSVDDLNLDIKDGEFLVLVGPSGCGKSTTLRMLAGLEEVNKG RILIGGNDVTTMQPKDRDIAMVFQNYALYPHMTVADNMGFALKIAGTPKEEIRKRVEKAA EILDLTEYLDRKPKALSGGQRQRVAMGRAIVREPKVFLMDEPLSNLDAKLRVQTRTQIAA LQRQLGVTTLYVTHDQTEALTMGDRIAVIKLGVLQQVGAPTELYDRPANVFVAGFIGSPS MNINTHPVVNGKAKIGEDTVDLPTEAVNKLTAEDGGKIVVGFRPEDATLATPDDPNAFSL KVQNIEDLGSDGYIYGTIITDGSAAEASTMMSDQNKLTTIRVNPRALPKIGQTVKIKIDP SKMHLFAPSTELRLN >gi|197324943|gb|DS990231.1| GENE 19 29868 - 30989 447 373 aa, chain - ## HITS:1 COG:no KEGG:BBIF_1766 NR:ns ## KEGG: BBIF_1766 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 71 373 1 303 303 592 99.0 1e-168 MRQHKHLDDLMNRAEMDGRCCSASSPAERQAMLRRTRCGDVVRPFRSVYARREYWDGLNP IEQASHVIREMARRHPERVFAGLSAAVIYGFEHSWTLHDEPYVYIATDGFTKSRRSYHRL RRISVRRSDIREDCRVVRLYRPRGDGAAQDGSNTWSQVSKLADRIAHERALRDNVCIGEV RVTSPARTLVDCALLYPFEHVLSMFDSALRRGLVTREEIVAVCDGLRVDCGPVFRLLHYA DARSENGGESFCRAVSIEEGFVPPQLQHTFYSRVTGKEAGRVDFIWHTEDGRIIVLEFDG MQKYIDPEMTSNRDVRQVVRDERQREQDLKEAGVSVVIRTNYIEVVQRAPFVMKLMQAGV PRAGAHPIFEHAD >gi|197324943|gb|DS990231.1| GENE 20 31330 - 33801 1561 823 aa, chain + ## HITS:1 COG:L138452_1 KEGG:ns NR:ns ## COG: L138452_1 COG0515 # Protein_GI_number: 15673869 # Func_class: R General function prediction only; T Signal transduction mechanisms; K Transcription; L Replication, recombination and repair # Function: Serine/threonine protein kinase # Organism: Lactococcus lactis # 16 230 12 220 431 115 30.0 4e-25 MSDALNLEPGALVGGYTLMSRLGSGAMGSVWRVHDDGGEEYAMKILRDSLADDRSTASAR DQITARERLRREAMALKKVNHPGVCGIVDMELDDSLAFIVTELIEGKNLRDDVAANGPYV ADDLERLASKLMDAVRAVHAAGIVHRDIKPTNVMVSATGPVLVDFGIAMGEGESHVTRTG LVMGTPGFIAPEIIEGTESDEITDWWSVSSVLAFAATGKPVFGTKPMMAVLEREASGNAN LTGLPATTMTAFRAALNPDRSKRCTPEQLLQAITVDAFNPGAWQQYDDDAAQSGQTDVMR PFDHTGLRNPRLLWRPHEPAESGEKPTAAVTKAGMPRQTAMPGVRPALQRIIGQSAPSPY ATVPPIPRLPNAGQAADAASASLRRIPSIGTGADAGTSDGTAPLRGAPLPGNIASSQAPG NDRTAPMSRLTPPMPPTMPVGTEATESLRPQPTSVLPTSTMPFDSTVSVGRTMPMQPQPT TALPTDDADMTGATAVIEPSSSADTAATLAMDDPVWSGRQQIPTMTMPPLSPQQIFADPD EAATPTTAMQPGQPAQLQPAAQFQPSMQAMPTAQAMPPMAMNPADIKRQTYLRQGTPLLA AWAAPIAAMAASMPLAAMVAATLLCWLLLTVGYSTDAQLQREYRRGGTHSAGDTAMRIIT LPWHALRGLPAAIGRGLLAVATLALGSTLATLIFSLPVVNTRFAIGGITIVVPIIAASPV SPSGLALAICAAISWIIGMLAPAPTMLRLGTGTLLGLNRPAGSSGAGMLPESSDNETAPA ISAQHSGREFAVWIAWAVITLSACTLLGLGQGINWWPLPSNVA >gi|197324943|gb|DS990231.1| GENE 21 33952 - 34926 1556 324 aa, chain + ## HITS:1 COG:ML1667 KEGG:ns NR:ns ## COG: ML1667 COG1651 # Protein_GI_number: 15827883 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Protein-disulfide isomerase # Organism: Mycobacterium leprae # 115 276 90 234 264 73 33.0 5e-13 MAQKNQNAKRNTRASRRAAEEKAAQEKAEQAAKERKQQTIIGAVVVAIIVVLVAIAGFAI YGAIHKNDVAKSTTEEQAYQQLQKVETKPSAADDKGGILISSEGYGKKVSGAPTVAVYMD PLCPGCGEFNRQTDPTLISLVDAGQINLEIHPMSFMDEYSTDEYSSRATGAILYIASNDD NPDHLLKFISNIYAEDFQPGEASEYKSVKNKALKQQAIDAGVPQSVADKAFNGEYRKWMD AINLYTPKRPELWQVSGSNKGVMSTPTITINGNYWDRNQLSLAGMNNKTGIIASLGLKEN EVGQKGTMPSIGESGKPISLTTGE >gi|197324943|gb|DS990231.1| GENE 22 35212 - 35391 360 59 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MCDARSTCSKLCLHIVLPCVSARSLPPTYGFWKAERPPISSAHRGAGQSPSLPPPSSLF >gi|197324943|gb|DS990231.1| GENE 23 35545 - 37077 1717 510 aa, chain + ## HITS:1 COG:BH0055_1 KEGG:ns NR:ns ## COG: BH0055_1 COG3583 # Protein_GI_number: 15612618 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Bacillus halodurans # 25 287 12 278 320 96 26.0 1e-19 MARRWTPRRFVRLRRIRVAICAVAVALASTVAFGVAARKTIALSINGDTQTVTTYAMSVT RLLEERGVDVKSHDLVQSTSGDILSNHDVVTVRSAYQTTISIDGQRVPFWTVATSASQLL GFFQQNENEAAKVTVDIDNIYSQLTGGLVINESGPVTVIADGKTSVAPNGKLPAASILDS KGISLNKEDRVSVEKDGDKTVLRVQRVTHGQETTTVAIPHGSQTIVDKSLKPGTSVVRQQ GEDGEKKQVYNVTYVDGIAETRTLISETTTKISLDTIVAVGPEKAAEPSDTSKGQADKGS DNAGKSGNKSNTGKSDGNSSNGSTSGANKSDDTSNNDKNNDKNNGNSGNNGNSGNSGNSG NSGNSGNSGNSGNSGNSGNNGGNGGNGGNGNSGNNGNSGSSSQGRLWHPTAAQAKAYASG AAAQRGWTSYDWTCLDKLWTRESRWLWYAENAKTGAYGIPQSLPASKMAEFGANYRDDGA VQIDWGLAYIARRYGSPSKAWERSEQIGWY >gi|197324943|gb|DS990231.1| GENE 24 37098 - 38039 993 313 aa, chain + ## HITS:1 COG:Cgl0886 KEGG:ns NR:ns ## COG: Cgl0886 COG0030 # Protein_GI_number: 19552136 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Dimethyladenosine transferase (rRNA methylation) # Organism: Corynebacterium glutamicum # 15 307 2 293 293 250 47.0 2e-66 MNPSPAPSGASAAAEKPAAAGRLLGAADIRHIAAEAGISPTKKFGQNFVIDPGTVRRIVR EAAVTADTRVLEVGPGLGSLTLAILETGATMTAVEIDPPVAQRLPHTIDTYMPDARNRLT VINKDALALTSADLPEFSGDEPFTLVANLPYNVATPIILTLLERFDMLTSFVVMVQKEVA DRLTATPGSKIYGAPSVKLAWYGSAERVGNIGRHVFWPAPNVDSALAGFTRVQSHAGPRD PQLRQLTFQLVDAAFSQRRKTLHAALKRMVPDEVFHTAGIDPTRRGETLTIDEFAALATA LRQSQHEQGQASS >gi|197324943|gb|DS990231.1| GENE 25 38036 - 39076 686 346 aa, chain + ## HITS:1 COG:MT1040 KEGG:ns NR:ns ## COG: MT1040 COG1947 # Protein_GI_number: 15840439 # Func_class: I Lipid transport and metabolism # Function: 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase # Organism: Mycobacterium tuberculosis CDC1551 # 43 329 2 293 306 124 36.0 3e-28 MSATAMDNVRSATPGQVRRSPSVPAHWPIRRHVAAAETTPAGPLHSVEVTVPAKTNLTLH VGPAHEEWGGRHALDTIYCAIGVNDVVTATAKTPGSGFSLELSGEHLGDLASSGSDMRRN HAVLALFAIARAAGREPDVALHVDKHIPVGAGLGGGSADAAATLLAVNTLWGLHWPIERL RDIAATLGADMPFCLEGGYAHGTGFGERIIPLEDDSSCVQTLRDRGFAGQLLVGAYRAQL STPNVYSTFDKMGAGDGDDNHLQRAAVTLHPRSGEAIEAALAAGASRSFVSGSGPSVIAF VTDDAVARRVRTAWEQSATVDRIIAAQAPARPVITVLPSLSYRVRQ >gi|197324943|gb|DS990231.1| GENE 26 39118 - 39744 925 208 aa, chain + ## HITS:1 COG:no KEGG:BBPR_1831 NR:ns ## KEGG: BBPR_1831 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 208 1 208 208 410 100.0 1e-113 MTQPYDERAERKRYIRRRQQIVFSCVGAVLAVALVVSALFYFHVGGLGITATSAVKPNYG VRVPCSTKDANGKNQTYSNYANVKVRVLNGTKFVGFAKAVSTALSNRQFKVTGWDNYKGK KVERTTIYFGKNAINEAYTLNTNFTDAVMVMDDRDDKLIDVVLGASFNDLANKDSLPSGD TAIENFEGCVPVQSMGTLPKALDHEKVE >gi|197324943|gb|DS990231.1| GENE 27 39836 - 41263 1896 475 aa, chain - ## HITS:1 COG:MT4026 KEGG:ns NR:ns ## COG: MT4026 COG0617 # Protein_GI_number: 15843539 # Func_class: J Translation, ribosomal structure and biogenesis # Function: tRNA nucleotidyltransferase/poly(A) polymerase # Organism: Mycobacterium tuberculosis CDC1551 # 16 474 27 476 480 468 53.0 1e-131 MERPRVNFEVWPEAIELGHLFAARGYELALVGGPVRDLLLHRRSHDLDFCTSAHPDEFEP ILRHWGRDGFWDMGRKFGTLGAMRRREDGTEVKVEITTYRSDTYDPESRKPEVSYGDSLE GDLSRRDFTVNAMALRVPQLEFVDPFGGASDLAKGVLRTPVDPYQSFDDDPLRMMRAVRF VAQLGFSIAPDTAAAISDMTDRIDIVSAERVRDELTKLLLSDRPRAGVEALVESGLADIV FPEIPALQLEIDEHHRHKDVFEHTMIVLDRAIALETGPEGPVPAPDLTLRLAALTHDIGK PKTRRFEPGGKVSFHHHDAVGAKMTRKRLKALRFDHHLVEDVSELVNLHLRFHGYVEEPW TDSAVRRYVKDAGPLYERLNRLTRADATTQNRRKAMVFSSAMDEMEQRVRDLKEKEDFDA IRPDIDGNEIMTILGIAPGPEVGRAYKHMLEYRLDNGPVDHDTAVAELKRWHASL >gi|197324943|gb|DS990231.1| GENE 28 41340 - 41993 635 217 aa, chain + ## HITS:1 COG:MT4027 KEGG:ns NR:ns ## COG: MT4027 COG0494 # Protein_GI_number: 15843541 # Func_class: L Replication, recombination and repair; R General function prediction only # Function: NTP pyrophosphohydrolases including oxidative damage repair enzymes # Organism: Mycobacterium tuberculosis CDC1551 # 78 207 62 194 248 115 48.0 8e-26 MITPADLARMLAHAAGDHTQNPLEPDTLLYTSEAPRTPKTVVRPPEPRFPTPAMMPQRRA GDGPTTFASLDAQELPVVREYSAGGLVFDERGRVAIIARHSRNGHLEWCLPKGHIEKGET PQQTAVREVHEETGILGEVVESIATIDYWFTGTSQRVHKLVHHFALRQIGGDLTVEGDPD HEAEDAIWVDFDDLDDVLSYPNERKIAWLYARKMKQG >gi|197324943|gb|DS990231.1| GENE 29 42074 - 44269 2354 731 aa, chain + ## HITS:1 COG:no KEGG:BBIF_1775 NR:ns ## KEGG: BBIF_1775 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 731 29 759 759 1198 98.0 0 MLLTCAMLFAGRMVPAGPAHMAMADDETDTATQTTALSITESTPVVTDTSGYHITISISN PTYAATSPGLVTVAYNPSYTFVSRTDIQHWATGDVSIPVRTVLGTATVPSIAANKKVSVK IDAAADSDALKALQMWGPKPLLVTYQATQATDSQSTGSSDGSSGSDRTVDPNTKPIRLHS FLTRSSQGLRNAQTPPMAITMVMPLMNNGQQADKNAIDQLVVHDNGDESDTKSTQSGGGV TDDSTDDGSGNNTDDTENTAATQSSVLTPHDNDALAAKLSLIGKHSDLQTIADPTALASD TGQRIDAVMQPAGFDITAYAAINNVRSYEQAGVGTGAWNARSALAAAPASSNSLPIAWQG KGDWTRQALSTARKQGYQYVIAGHDFDSSTTATVHTGTYTIPTSAGDITVLSEQKELGDL VKGKPTSSDADGETSNAGRIARFVAQSAFYQMEQPYAAMNRNLLVCFGTNMSAAFIDTLM TAVEQSSWLQLTDLNDLIDADAYRTGDKALQIVPQDSHLSERNTRSVTSALESLAESRND INRFATSVLTDHKASASWIRKIKAAQSTLALHALSSAPRDIDSLVDGAKRLGGGMFGGVS ITPTDSITVVSETAKMPVTVRNNHPYPVRVKVSSLTDSMEIVTSRFTEVTIPANSEAQVT FAIRVATSGHATAHITLLDRNGDTFGSAQNTDITSVLRISDMTGFIIIGFSLLLGLVGLW RQFHRKKDPDE >gi|197324943|gb|DS990231.1| GENE 30 44266 - 48681 3207 1471 aa, chain + ## HITS:1 COG:Cgl3028_1 KEGG:ns NR:ns ## COG: Cgl3028_1 COG0728 # Protein_GI_number: 19554278 # Func_class: R General function prediction only # Function: Uncharacterized membrane protein, putative virulence factor # Organism: Corynebacterium glutamicum # 3 413 78 480 640 146 29.0 4e-34 MSTTVGRNSLIMACGTAASRVTGQIRTIFLVGALGTTGIAANAYQAGAQIPQVIFNLLST GVFNAVLVPQIVRTLKQKDADERLSKLITLSIALLLAITLLMASGTPLLTMLYLDSSWTP AQRALANAFTLWCMPQILFYGLYTVLGQILAAKGRFATYAWSSVGANVISCIGFGAFIML FGNAGRQPMSFWTSGKIALTAGAWTAGVAFQALVLFIPLLRCGIHYRPRWGLHGLGLRSM GQVAVWSIAMVLLNQLMGIVNSRVNTGAPTAGGDLYGIAGNASYQYAYTIYVLPYSIIAV SITTAVFPRMSRAISEHRIGDARADLSSSLRSTGLAMFFFTAVMIAMPVPLVKALIPSTN VHGAILISGPLIGLLVGLVPTSAFLLVQRAFYAYEDGRSPFLFAAADNAVQLLLLLTSLR FAPPKYWTLMVALSLSLSYIITFPWVFWLLRRRFGGRIDGKRIIIMHVKALIAGAAACAC GLFLNPLATRLVGAKVSSVNGHMSWWQSIVICAILTIVVTAVYAGLLWLMRMEEFSSLIV TMKAQLLRRTSTATSVSTPAESEAEEAQAQNAEVEEGTTAIAENDNHYDNHSLGDDGTSE NDGSAERAAETVTDLERPVQDHPRGIPSDNLPPSFAPTVNRKGQRPSIKSVVLPNVAANA AGATAGIAAGNNAQPRIPTILPTPHHSTRQAASIAAAQPTIPTARMSASPLSQRMTAEHG ETTTMKPQLGDTVIGRYTLVSSLRESDGLSAWIANDRMLAQSCQLFIITDTSVLPQINEA ASTLALANSRYCTPVLQLQHVGDAAVVITEPDSGLALAEYMQRSSSSFLSYDAIRSIVGQ CTQAVQELLDTGLTHTALSTDTIRVSVNGVQFADTPVAAALADICSGIDGDVMSYEQMAT RQLAALLYALLTKTPSGANTTFDLNMLPADVPTEFRVICKRGLALHTEDGEIIVPMATLA ELSALLGAWEPFGNLSDRDIILPSVSGSASISMVALRDTSDDKIVELPDGLVTSTKLPEL SISEAGLAAGAEARFVNEQRLAQQAFLAQLPGDPPSADQPVIPEAELFEPDTAEPSKTLA SLQSKVGQLMGSLRKDGEPESPVTTSTAEETAIEQPMPVYAPLPASFPPAAKPRRSATGA TKAQSGNGVNVPANAAGASGVAGGTGKPRTTGATGDIQSIVANMPNVPLPEENDNERTRA GSIPPLPQSGEAQVSEGEQTVAGSHPTTHAAQPIATNAMPQPRAHMSESLAALAARSAKA AASGDTVMPPSFAVSASAPGANGAAIPGSSKSRTRMTAPISRDALRNMSGGRPAAAPGAN VPGVQTPAQRAQSDAFDPTVTVPLLGTDGTSVDQLPPMAQIMPPSFAPQQVHGVNAANVG RNIEEDLPDQPLWGQLKIKVIAIVVALVLLVVGLVAAWFILNGDNHGGGSDNQDWPNKTD IDNVPFGNSTTQNSTSKNSAAQSDIVYIRVL >gi|197324943|gb|DS990231.1| GENE 31 48931 - 50040 569 369 aa, chain + ## PROTEIN SUPPORTED ## NR: gi|148988049|ref|ZP_01819512.1| 30S ribosomal protein S9 [Streptococcus pneumoniae SP6-BS73] # 6 368 4 306 306 223 40 3e-57 MTELSTIIIGSGPAGYTAAIYLARAGYRPTILAGELTPGGQLVNTTTVENYPGFPDGILG PELMDRMRDQAESFGASIEYLDVTSVDFSSSPKTVTCSDGSRYHADAVIITTGSQYRKLG IPGEAEYSGHGVSYCATCDGFFFKDKPIVVVGGGDSALEEALFLTRFGSSVTVLHRRDQF RASKIMVERVLNNPKITVKMNTVATAIRGQKNAAGEQTGADAVTAAAPAAQNTGNLLSLK TTPMLNVSGSALNAPSSTGISLSAKAETADDSAGFVDIRDTVTGETGTLPAEGIFVAIGH EPATRFAKGSVDMDDDGYILVSGAGTHTSMPGVFAAGDCVDRVYRQAISAAGMGCRAALD AQSYLASLH >gi|197324943|gb|DS990231.1| GENE 32 50508 - 51872 786 454 aa, chain - ## HITS:1 COG:Cgl3034 KEGG:ns NR:ns ## COG: Cgl3034 COG1475 # Protein_GI_number: 19554284 # Func_class: K Transcription # Function: Predicted transcriptional regulators # Organism: Corynebacterium glutamicum # 137 441 80 376 379 246 49.0 6e-65 MTSKSRLGKGLGALFPALPGESRTAHAEQQQLGVDLESEETTANKKAPQEKAAAAPEKVE SHKSGTEQHSESTAPVRLGEIKRKTIPAMKDSIPAVHKSTTVEKPKSGKRVAMPGISDMA HPSDMFFGATAQGTSDSKKTQPAQRSESTKASGKEKDNKETPKLKPVEGGYLLDIPVSSI VPNAQQPRSVFDEEELNELAASIKEVGVLQPIVVRKRQAGESSKSDVSRETSQRYELIMG ERRWRASQLAQLKTIPAIVKTTSDDEMLRDALLENLHRVALNPLEEAAAYQQMIDDFGLT QAELSKSISKSRPQIANTLRLLNLPASVQKKVAAGVLSAGHARALLGLNDESEIDKLATR IIGEGLSVRSTEEIVALKNAESNVPKKVRPTKNNPWAGSPIVNNLENHFDTKVSIKGTQK HGRIEIVFSSPEDMERILSMLIPTAVEGAAAKWV >gi|197324943|gb|DS990231.1| GENE 33 51876 - 52859 100 327 aa, chain - ## HITS:1 COG:Cgl3035 KEGG:ns NR:ns ## COG: Cgl3035 COG1192 # Protein_GI_number: 19554285 # Func_class: D Cell cycle control, cell division, chromosome partitioning # Function: ATPases involved in chromosome partitioning # Organism: Corynebacterium glutamicum # 48 313 25 289 307 260 50.0 2e-69 MTSNDSQESSVVPAMESASETVRRIFGNDGSSLGAEIADEASRYERLNAALFPLPSRTRC LAVANQKGGVGKTTTTVNIAAALASHGAHVLVIDMDPQGNASTACGVPHGTSDPSVYDVL EGRMTIGEVLKTCPDIPGLDVVPASIELSGAELEVADLPNRNNLLKEAVESFLQDPNNHY DYVLVDCPPSLGLLVINSMCAVSEMLIPIQAEYYALEGLGQLINTIGLVQEHYNPNLTVS TMLVTMFDKRTLLSREVFSEVKSHYPSIVLDTTIPRTVKISEAPSFGKTVISYDPRGMGA SAYGEAALEIARRSPSVLAAIDAKRGE >gi|197324943|gb|DS990231.1| GENE 34 52915 - 53124 201 69 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MDVKHESDGFARMELSTISNSIQSYPHYLRHVIHIRKMAEINGLSSVDRSVHTLMHYTYP QLSTLLCTT >gi|197324943|gb|DS990231.1| GENE 35 53188 - 53295 63 35 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MQSKAMDIVRLTPQSNLRQRKQNYDSRQRGHGIIV >gi|197324943|gb|DS990231.1| GENE 36 53422 - 53910 197 162 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MLRLFNLSLRRTAFQCDQSTLRAKQRQRPTGKLGHWRHCSTGHYREWFQFTFVVLDTIDD FIGTCANNRNILQVHVIHALLQPFDTTFHGLNECKRTIRHACCRNDSRETAATANIGNGL CLASIGDFPNERDACGGVEDMTFPDDGYVAWAYQSTQLTLAG >gi|197324943|gb|DS990231.1| GENE 37 54018 - 54548 488 176 aa, chain - ## HITS:1 COG:MT4039 KEGG:ns NR:ns ## COG: MT4039 COG1847 # Protein_GI_number: 15843554 # Func_class: R General function prediction only # Function: Predicted RNA-binding protein # Organism: Mycobacterium tuberculosis CDC1551 # 2 159 28 184 187 92 44.0 3e-19 MAQEETTTIDQLNEEADIAADYLEGLLDIADYEGDIEMGVRNGRPMVQIIADDDTDIKHL IGCNGEVVDALQQLTRLAVQQKTGERSHLIVDVDGFLKRKRQRLRDTALDAIDEVHDTGE PVDLKPMNSFERKVIHDVVREEGLKSRSHGEEPRRYVTIYMKSSADESDVDEGSEE >gi|197324943|gb|DS990231.1| GENE 38 54630 - 55640 1174 336 aa, chain - ## HITS:1 COG:BH1169 KEGG:ns NR:ns ## COG: BH1169 COG0706 # Protein_GI_number: 15613732 # Func_class: U Intracellular trafficking, secretion, and vesicular transport # Function: Preprotein translocase subunit YidC # Organism: Bacillus halodurans # 12 273 35 263 280 94 27.0 3e-19 MNTSGEFLLDRGIWGWLYKLLTPLEWLMTQVMVLFHKFLTLLGMAPIGISWVLAIVFLVL VVHACILPIYLKQMKSMRKMQALQPKMQHIQNKYKGKKDQASKEAMSREMMKLYQDNDAN PMGSCWTAVIQGPVFMCMFYMLSAIPYIATGKRGALGAFDQATAKQFAQTRVFGVSVTDT FGTANNSGKVVIGFFILLMCACMWYMQFNNMRKNLPKASMQGSTYKMQQAMTWGFPIMYI FSGIMFPFAVLVYWLTNNACNLARSLFQVYKFPTPGSRAAEEKEIRDHRQENARRAKAGQ LSIEEEELEKARQEAAVRLERGYQRKQPQRKNRKKK >gi|197324943|gb|DS990231.1| GENE 39 55653 - 55949 199 98 aa, chain - ## HITS:1 COG:TM1462 KEGG:ns NR:ns ## COG: TM1462 COG0759 # Protein_GI_number: 15644211 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Thermotoga maritima # 8 84 5 81 81 79 49.0 1e-15 MSAIGSALIGMIKWYQRAISAKTPPCCKYYPSCSHYAITAVRRFGAVRGIVLFIWRFLRC NPWSRGGIDDVPQHFSLCYRFRWSKAYEKPRLTPMADD >gi|197324943|gb|DS990231.1| GENE 40 56343 - 56477 225 44 aa, chain - ## PROTEIN SUPPORTED ## NR: gi|224283951|ref|ZP_03647273.1| Ribosomal protein L34 [Bifidobacterium bifidum NCIMB 41171] # 1 44 1 44 44 91 100 2e-17 MKRTFQPNNRRRSMKHGFRVRMRTRSGRAMINRRRNKGRKSLSA >gi|197324943|gb|DS990231.1| GENE 41 56830 - 58419 1691 529 aa, chain + ## HITS:1 COG:MT0001 KEGG:ns NR:ns ## COG: MT0001 COG0593 # Protein_GI_number: 15839373 # Func_class: L Replication, recombination and repair # Function: ATPase involved in DNA replication initiation # Organism: Mycobacterium tuberculosis CDC1551 # 1 526 1 504 507 344 41.0 2e-94 MSDDLLGPAGQATRIWSDTLRLLKQNPTLSPRDKSWLEGVVPEAVYGTTIVLCVSNMATQ QALQNELNAPLLNALKIISGNDMFPAFKIVAPQVSQPEPQPPEYRHPDTAAKPSEPFPAN PSPTVADLAQESYMPNSMQSISSIDSISAEMTEANQQPGATAPRIPGEPSFPVRQQKVMR DPETHLNKNSTFDTFVPGDSNRFARTVALAVAEGTGQEFNPLCIYGGSGLGKTHLLNAIG NYALVKDPTLKVRYVNSEEFTNEFIEALQTPAQSQNRIAEFNRRYREVDVLLIDDIQFLG GKEATLEQFFHTFNALHQANKRIVIASDVAPKNLKGFEARLISRFDSGLTVDVKPPDLET RIAILRMMASMNGTSTPNDVLNLIAERFTENIRELEGALIRVSAVASLSSQPVTRALAEQ TLQDFFTTDVEIKPTDIIGQTAKYFHLTFDDIVGRARTKNIALARQVAMYLAREMTSMSL VDIGEVFGGRDHTTVMHAYTRVSDDMQEKPEIYNYVTELTARLKQRGNE >gi|197324943|gb|DS990231.1| GENE 42 59021 - 60145 1382 374 aa, chain + ## HITS:1 COG:MT0002 KEGG:ns NR:ns ## COG: MT0002 COG0592 # Protein_GI_number: 15839374 # Func_class: L Replication, recombination and repair # Function: DNA polymerase sliding clamp subunit (PCNA homolog) # Organism: Mycobacterium tuberculosis CDC1551 # 9 372 21 400 402 234 36.0 2e-61 MKVEIDSAALADAVAWTTRVIDARPASPILAGIQLEAIDGTLQLSAFNYEISARHHIEAG IDEPGTALVLGKLLADITKSLPAEKTYLSTDGSTMTINSGKSTFTMQLMPDAEYPDLPVV PAKLGQVDAPTFIQAVTQASVAVSREENRPVLTGVRMQFDGDKVTMTSTDRFRLSRATFT WTPQNIDTSTTTLVRGSLLRDVARALDDHQNVVIDFDADNPTLLGFENAGRVSTSQLIDG EFPAVDRLFADEYPIQAVIDKQLLIAAIKRVALVAERNAPIRMVFSGQEVTLSAGAVDEA QAQEMLDIDMDGEDITVAFNPSYLIEGLSAITEPFVRMKMITAVKPVEFNGQQEADSDES MDYRYLLVPMRFNS >gi|197324943|gb|DS990231.1| GENE 43 60233 - 61546 1034 437 aa, chain + ## HITS:1 COG:ML0003 KEGG:ns NR:ns ## COG: ML0003 COG1195 # Protein_GI_number: 15826868 # Func_class: L Replication, recombination and repair # Function: Recombinational DNA repair ATPase (RecF pathway) # Organism: Mycobacterium leprae # 1 401 1 361 385 191 33.0 3e-48 MYISRLALDHYRSWNHCVLDLTPGINILQGANGLGKTNIVEAIEVLSTGLSHRTSSSVPL VQRGEHAATIRANIESVTDPEPADDGVNTSADAVDISDMKPVRQTQTTTLEATIAARGAN RARINGGQSRYLREILGTLPTVSFTPEDQQLVAGDPAVRRSFINQVASLLIPGYANRLQS FTHVAKQRAALLKQLGQWQRAGSPIDAALSGLEIWTGQFIEAGVALSRDRQRIIAELNKS FGPLYARLAGVAGDLPSNAEIQDAAQDGGEQAAVEYVPSFDEILGTQAPEPLISQHFQRI YPGEVSRGVNLIGPQRDDLLVTLNGMPAREFASNGEMWTLALALKMAQYRALCEYFDTRP VVILDDVFAQLDESRRTEILRFAAAQDQVLITAAAESDIPILPANESTESGEIPVNRIAV ADLKRRDEADAERAGEQ >gi|197324943|gb|DS990231.1| GENE 44 61543 - 62115 394 190 aa, chain + ## HITS:1 COG:ML0004 KEGG:ns NR:ns ## COG: ML0004 COG5512 # Protein_GI_number: 15826869 # Func_class: R General function prediction only # Function: Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives # Organism: Mycobacterium leprae # 67 183 57 173 189 64 33.0 1e-10 MTEPRKPNTPGGPGAPSRPDKPGSAVKPGNVHDSHEPICATLHLDQRKLPATVFEHIAKM AGGRRQRMIDAEAAWENFGKPGRDPSTLGSVTALIANNGHWIPYLKIAQLRNHWDQVVGP VIAQHSQVIGLRDGVMTIRADSAAWATQLTYLIPQLERTIKERLQGLDVHKIQVTGPRAA TFRGSRMKRR >gi|197324943|gb|DS990231.1| GENE 45 62266 - 64428 2367 720 aa, chain + ## HITS:1 COG:Rv0005 KEGG:ns NR:ns ## COG: Rv0005 COG0187 # Protein_GI_number: 15607147 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit # Organism: Mycobacterium tuberculosis H37Rv # 60 719 49 713 714 750 56.0 0 MAVLESDSEHESRDESGMPEQAPGSGLTASSAEQHDREVDEAIAQDELDDAQLDDTLSPD HYDASDLKVLEGLEAVRIRPGMYIGSTGPRGLHHLVYEIVDNSVDEALAGYATHIEVTIL PDNGIRVVDDGRGIPVDEVPGEGVSGVETVMTKLHAGGKFGGGGYAVSGGLHGVGISVVN ALSTRVDIEVRRQGFHWTQTYVNQHPTARLAKGAPMAEDESTGTSVTFWPDAAIFESTVY DFETLRSRFQQMAFLNKGLKISLTDLREPDLAGDEVAGDDDSTEPKHQSVTYQYMNGIKD YVSYLVKSRKATPVEEDVIDFEAEDLKIGISAEVAMQWTTAYSEAVHTFANTISTTEGGT HEEGFRAALTSLVNRYARDKNILKEKDDNLSGDDVREGLTAVVSVKLTTPQFEGQTKTKL GNSEAKTFVQRVMTDKLGDWFDAHPAEAKNIIQKAIEASRARIAAKKARENTRRKSIFES AGMPDKLKDCQSSNPEECELFIVEGDSAGGSAIQGRNPETQAILPLRGKILNTERASIDR MMKSDTIESLITAVGGGYGEEFDVSKVRYHKVIIMADADVDGAHIATLNLTLFFRYMRPM ITAGYVYVAMPPLYRLKWTRGDHDYVYTDRERDEKLAQGKAAGRQLPKGEGIQRYKGLGE MTYQELWETTMDPEHRILKQIHIEDAAAADETFSMLMGDDVEPRRLFIQRNAKDVRFIDA >gi|197324943|gb|DS990231.1| GENE 46 64563 - 67295 3248 910 aa, chain + ## HITS:1 COG:Cgl0012 KEGG:ns NR:ns ## COG: Cgl0012 COG0188 # Protein_GI_number: 19551262 # Func_class: L Replication, recombination and repair # Function: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit # Organism: Corynebacterium glutamicum # 37 894 3 851 856 980 58.0 0 MADENSNGTDLPEQNDERAEHSMEPISPQANEQLVLDDNRVAHTDIQKEMRQSYLDYAIS VIVERALPDVRDGMKPVHRRIVYAMYDGGYRPDRGYSKCARPVADVMGNYHPHGDAAIYD SLVRMAQPWSMRYTLVDGQGNFGSAGDDPPAAMRYTECRMMPLAMEMVRDIDKDTVDFVP NYDGRTQEPTVLPARFPNLLANGSSGIAVGMATNIPPHNMRELAEGVHWTLDHPEASREE LLNALIGIIKGPDFPTGATILGHKGIEQAYRTGRGLITMRAVVNTEEIKGRMCLVVTELP YQVNPDRLAASIREGVRDGKIQGIADMRDETSGRTGQRLVLVLKRDAVPKVVLNNLYKHS QLQQTFGANMLALVDGVPRTLSLDAFIRHWVNHQLEVIERRTRYLKREAEERDHILQGLL KAMDAIDEVIRLIRSSQGREDARPKLMEFLDIDQVQADAILSMQLVRLANMERQKIIDEH EELMRKIADYNDILAKPERQRTIVGDELDEIVAKYGDERRTKILPYSGEMNVEDLIAEEN VVVTVTHSGFIKRTKANEYRAQHRGGKGIKGAKLREDDVVDHFFLTSTHNWLLFFTNKGR VYRIKAYELPEGSRDSKGQHVANLLQFGPDETIQTVLSIPNYEVAKYLVLATRTGKVKKT ALAEYDSPRQGGLIAVRLAADEETGEPTDELIGAALCNAADDIILVSKQGMSLKFAADND QLRPMGRQTAGVQGMKFRGDDELLAMDVVPEDSKQDLLVVTNEGFAKRTAISEYRLQGRN GFGVKAVQLAEGRGSLVGALIVSEDDQVMAIMKSGKVIRSNVTEVKRTGRTTQGVTLAKP DKGDEIISIARNEETGEDEVETTDDTAAAASATTSPDTAENTPDTADSVASGSDSGAASD ENVNNTDDEA >gi|197324943|gb|DS990231.1| GENE 47 67355 - 67912 632 185 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0006 NR:ns ## KEGG: BBIF_0006 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 185 1 185 185 293 99.0 3e-78 MSDNLEPGRTDMFVPGPHDNAEPHEGVRESAPRVARSVSNQPQSESEPRANKTRASLRSP RRSTPRARRMNLSLTHVNAWSVAKVTFMLSIAGAIIEVLAAALVWLLLDAVGVFDQLNNI VSSTGLAADSLNLSSVFSLSTVLSVVTILAIVGVVLVTLLATIIALLYNVISALVGGIHI TLGDD >gi|197324943|gb|DS990231.1| GENE 48 68275 - 68529 262 84 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0007 NR:ns ## KEGG: BBIF_0007 # Name: not_defined # Def: alpha-L-arabinofuranosidase # Organism: B.bifidum # Pathway: not_defined # 1 84 32 115 115 148 97.0 9e-35 MILLVNRDEHNAHDVTIGLTSLPRLGEWPSVTSSQMLPSDDIYRTNTADEPDGVTLQPLS AALDEGRMTVSLPPVTWASVRFTA >gi|197324943|gb|DS990231.1| GENE 49 68555 - 69091 240 178 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0008 NR:ns ## KEGG: BBIF_0008 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 43 178 1 136 136 169 97.0 4e-41 MATATVKSRKAGSGTGSAWAQYTDELATASTTADTKAGEPQYVTTTFTVPADAAPEGAPW LSFSDMGLADDANGYIDDVVLVRSDSKPTLKTTAFTPTVAEGETASAYVELDGQPAAKEV SANKNATVDEVATALKTSPPHRTPWPRSRSRRPSNRSRWPRSPPRQSTRSATRFPPMV >gi|197324943|gb|DS990231.1| GENE 50 69508 - 70422 1308 304 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0009 NR:ns ## KEGG: BBIF_0009 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 304 1 304 304 611 99.0 1e-173 MADRFGAFLPHDTSGDVAQLHGIGLQKFGDTWYAYGENKVNGNLFQGVCCYTTTDFIAWR SHGIVLDVQEDGSALAADRIGERPKVLHCPATGKYVMYIHAETPDYGYAHIGVAVADAPT GPFAFQTTITWRGYLSRDIGVFQDEDGSGYIMSEDRDHGTHIYRLADDYLTIVEDVACER ATDYPYGLESPTIIKKDGLYYWFGSQLTSWDTNDNKYSTATDLHGPWSEWKLFAPKGAKT YDSQVDIVVPLDDDPYNSEHFLFIGDRWQEHDLGNSPIVQMPISIADGVASLTWSDTYEG TTHR >gi|197324943|gb|DS990231.1| GENE 51 70502 - 70732 67 76 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MYRDNLADIRKNRSAPGGGAPATAAWGRALQYEALRTRKYKGLFVIFALYLRVLRAWFFL DHADWRSAMVVGSSCT >gi|197324943|gb|DS990231.1| GENE 52 70684 - 71889 1213 401 aa, chain - ## HITS:1 COG:TM0949 KEGG:ns NR:ns ## COG: TM0949 COG1609 # Protein_GI_number: 15643711 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Thermotoga maritima # 67 400 2 326 332 127 29.0 4e-29 MSTTIHAPNKVASTSGKPTRRLANRTRTKSSARSNETPVDQNSDKQPANIQQHEANTDAM DSMDDAQKKPTIRDVARLAGVSYGTVSRYLNGNTHVSQDAAERIAAAITKSQYTPNNAAR SLAQRRTLTVALIIQVESNETIAQASMSRAMAGANQVLGDAGYQMVTLIANSEDSTRRIA QLVQSDFSDGYLLFSLSEDSMLANTFASVKRPVVLSEVSKCENLPFPAVGFTNTEGQRDI TRYLLDQGRTKLVYVCGPGYSPSSNNRFDGFKAAMGDRFNERHVYYADDWEGTSGEMAVV EFQPMLDELDGFVCANDSIALGVINQLNRFGYRVPDDIAVTGFDDSPIALLANPKLTTVR QDSQLHGETMSRLLLSMLQGDIVEPHYVQLLPTTIAERQSA >gi|197324943|gb|DS990231.1| GENE 53 71889 - 72182 62 97 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MISMYSRRGNRQDDYAPHYPSANAKYNRLRSHVGMRRHRRATDGEPHGGRAANRDCGKAP HATAGTTTDTPCNRLHHLRILEPVRGRPTTAARVKEQ >gi|197324943|gb|DS990231.1| GENE 54 72181 - 73332 1093 383 aa, chain + ## HITS:1 COG:Cgl1956 KEGG:ns NR:ns ## COG: Cgl1956 COG2267 # Protein_GI_number: 19553206 # Func_class: I Lipid transport and metabolism # Function: Lysophospholipase # Organism: Corynebacterium glutamicum # 15 341 4 329 341 160 32.0 4e-39 MTDPLHIQLTARPTVDDWQPDCVMDGYQQATIHLGHDDEGDIVATFVRRDPSKLPMRARW RRQRFALRGHRLAVMYVHGWNDYFYRRHESEFWESLGIPFYAVDLRKFGRSLRDGQTPGY IEDLHDYAAEFNALRDLVVAEQGEQVRILLVAHSQGGLSSVLWLNSQRPHHVEAVALDSP WLELQGNRMFRILSTPVVQAFQLGGGKTVMPMRDPGFYGRCIDCETGGDWDYLRHPLVDP QRFFPRAGWMRAIYNAQAEVSRRLDIRIPVLVCTSDRTMLQPTWDEAMREADSVLDITAI RQAALNLGDVVTLATIRGGLHDLSLSRPAARRRYFRIVADWASLMAWRRVIPPAHLRTAL DAVAAAGSHVGGVNPDVGPDAKS >gi|197324943|gb|DS990231.1| GENE 55 73381 - 73743 254 120 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0012 NR:ns ## KEGG: BBIF_0012 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 69 120 1 52 52 100 98.0 2e-20 MISDAEFDRWGEAAERGDYGGSKLGVLLKTNGFISPLIAARGCPSSNPNRHKEIQWQKWL FTASHGARMLRESNPQITTVDQHMEMRGKVMADIVIKKIHGIDSPRTVMLPTELVVRQSA >gi|197324943|gb|DS990231.1| GENE 56 73933 - 74247 400 104 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0020 NR:ns ## KEGG: BBPR_0020 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 104 30 169 169 65 62.0 8e-10 MTVRSADKTALNEVIAEAGSDEFEAAFDAAKKVAVDEDATPAQVADALAAPQKPAVKPSP NGKVDATEPSGLSKTGASTMAFAVAAVLLLAAGAGVVLLRRRAE >gi|197324943|gb|DS990231.1| GENE 57 74769 - 76115 2134 448 aa, chain - ## HITS:1 COG:lin0569 KEGG:ns NR:ns ## COG: lin0569 COG0334 # Protein_GI_number: 16799644 # Func_class: E Amino acid transport and metabolism # Function: Glutamate dehydrogenase/leucine dehydrogenase # Organism: Listeria innocua # 4 448 15 458 458 575 65.0 1e-164 MLTDEYVKRVYAQVEQRDGDQPEFLQAVREVFETIQPVVEKHPEYEKAGVLERIVEPERV VKFRVAWTDDEGKVQVNRGYRVQFNSAIGPYKGGLRFHPTVNEGVIKFLGFEQILKNSLT TLPMGGGKGGSDFNPKGRSDAEVMRFCQAFMTELCRHIGQFTDVPAGDINVGGREIGYLF GQYKRIRDEYSGVLTGKGLEFGGSLARTEATGYGVCYYTQEALRVLKNDSFEGKTVVVSG SGNVAIYAVQKAEELGAKVVTVSDSNGYVYDPNGIDVAVVKQIKEVERGRIKEYAERVPS AEYHEGCSGVWTVPCDIALPCATQNEVNGESAEALVKNGCKVVVEGANMPSTPEAIEVYQ KNGLLYGPAKAANAGGVAVSGLEMSQNSYRLSWSFEEVDAKLKNIMETIVADSLAAAKEY GHEGDLMLGANAAGFVKVANAMVAQGIL >gi|197324943|gb|DS990231.1| GENE 58 76219 - 76965 564 248 aa, chain - ## HITS:1 COG:Cgl2475 KEGG:ns NR:ns ## COG: Cgl2475 COG2186 # Protein_GI_number: 19553725 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Corynebacterium glutamicum # 56 245 54 246 250 140 44.0 3e-33 MAFRGRPASGTGHVAAELGAHRGDHTQDVVGAAARSLPGVKRRRGGRRGDAEFQRRFDVS RTVAREVAKSLETAKVVTVRRRIGLVSQPVEEWDALSTQVIHWKLHSTHREEQLRTLTEL RLAIEPAAATSAARYAPIDVKSRLPLLAAELRHTGENGRLDEFHKLDIEFHSLILRNSGN EMFASLSTIIATVLSGRVELHMYPQKPKPEALDAHDAVAQAIWQSSPDNARQAMHRIVDE VAETLQLS >gi|197324943|gb|DS990231.1| GENE 59 77073 - 77507 711 144 aa, chain + ## HITS:1 COG:DR2422 KEGG:ns NR:ns ## COG: DR2422 COG1970 # Protein_GI_number: 15807411 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Large-conductance mechanosensitive channel # Organism: Deinococcus radiodurans # 1 139 1 121 128 80 39.0 1e-15 MIDGFKKFISRGNMIDMAVGVVMGGAVTAVVNAIVNHLINPLIAMIFGKPNMDGLLAFTF NGATVSVGAILGALLNFLIIAVAVYFFILVPINKFRDMSDALLAKAKLKESEAEDADEGK EPEPTAEQQTIALLTEIRDQLAKA >gi|197324943|gb|DS990231.1| GENE 60 77882 - 81379 3878 1165 aa, chain - ## HITS:1 COG:mll3591 KEGG:ns NR:ns ## COG: mll3591 COG3534 # Protein_GI_number: 13473100 # Func_class: G Carbohydrate transport and metabolism # Function: Alpha-L-arabinofuranosidase # Organism: Mesorhizobium loti # 374 532 40 186 501 80 31.0 2e-14 MTHITSHRRSGKPWRSIMAAIATAAMALSPGAAAYAADADATAPATTASANLRGAWNFEN TAAGDREAANNGGSSSATAQLIGDDISIIADPAGVFGNVLHFGAGASSYMKINQYVNTGA GNASFAMWYRYDTTLDPTGDKPAVLLQQDGAGRSLLTLRPSNQYHTYVNATDVLSNNTVA RGGWQHIAVSFDQTSRKVKFYVNGALDSEKNMGTSAVNAVTALLVGSHKNIGTMDPHSMK GDVDDIRVYDATLTDDQAAAIYAEQGTALVRKQLGTLVSQADALLAAGEVDAASAQAQAL ATAKRNAANAMDNTSGSAAAQMTAMNAAGTALQTAITAYQAHVPITLTADPSTVERTVDS ASIFGVNHRYAFNGYGSFDPDTMRVKDDFTALYKQVGFGSIRYPGGTISNLFNWKTTIGP RAQRLKQMHGFYNNPGQGGIEPNFGIGEIATFADEVDSEIVYVYSLGRGNAQDAADLIEY LNAQVGTNPNGGIDWAKVRADNGHPQPYNVRYFEIGNEMNQAWANSDGTASQGYWTTAVS GGSEQAYTEGGTASFTKQYAVSLEDWNKAASVSDGKAGLTRYMRYANVNPKMNGDDGAIV DDPSFVAVNKGSVSVWVGNDQSNEQWRIVDDLETAGAGDKVVQVDYSTGALRFGDGVHGA IPAKGQQVYVSYTVDRDGFVKISKAIKNTTDQINTAEQRTDGTRHTANVYTSYESTGFIT RMTNLNANQWYDGMTIHPYSGTPTGATAGAWYDDAMKKAETAGVNRVKEYVRLMPAGKVP VISEYGIFRDTSALVRSQSHALYIAKVALEYVRLGSPYIQKHCLIDWYSSGADSLGPTQQ AVIQAVPEDGASTVTGEGRFGFFLTPSAYALQMLGNGIGDSVLTSTLGSTPTLGNGATSL SALVSKDDDGNLRVIIVNLDRALGRTLKLNFGQDLSGRVADVQTMDAAINAENTLENQDN VTPVDSSVTFDAATPTVTVTPHSLTTLKIRPRAAGTINAAPVITASDRTITVGDAFDPLD GVTAHDAEDGDMPLAAANVTADDVDPDTPGTYHVTITVTDSQGATTSKTFMVVVQAKEGG ETPEPEPDPSPGPEPTPEPAPKPAPDEETDQAAHQKPDGKTNGQQADNGKTKLSHTGASV LVALTCTAMLAIGGGLIATFRRKRS >gi|197324943|gb|DS990231.1| GENE 61 81969 - 82136 62 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MTCLHRHNSIDTALYTLSSQEVGLAADAPDITIAITYSNPCPLSAHPRLSAQEAM >gi|197324943|gb|DS990231.1| GENE 62 82097 - 84466 1540 789 aa, chain + ## HITS:1 COG:SMb21160 KEGG:ns NR:ns ## COG: SMb21160 COG3525 # Protein_GI_number: 16264574 # Func_class: G Carbohydrate transport and metabolism # Function: N-acetyl-beta-hexosaminidase # Organism: Sinorhizobium meliloti # 118 374 213 502 639 69 27.0 2e-11 MQYRYCCGDEDMSFDLIPEPQSVTLNGEAADSDDAGAPVPVALPLVGRISEDRDIDDIAG VFPTQLADDIEAATGLRWDIASDVMVAGLPAPNAAIAHPVPPHASCWKSFITLRLDPSSL EPQEYRLTIARSGIDVVGGDTEGVRNGVQTLRQIIRQCAPALPRLVIADKPAYKVRGYYL DATRGRVPTLDWLKTWADRLCLYKYNQLQLYIEHTFMFDDLSETWRGTSPLKPADIIAFD EYCARLGIELVPSVSTFGHQYMAMRTRELRHLGEFPEDADRRYGFVERQRHHTLNITEPE SLAFSFKLIDAYMQLFRTRKFNICGDETFDLGRGRSKPEAERRGVAAMYADFVSQLCRHL SERGREPMFWGDIAVEMPQILGLLPDNVTLLNWLYAPGIGEDKVRLVAQAGAPQYVCSAV WCWNALLPRLDDSWNNISRLARYGVKYGAVGYLVTDWGDYGHVNDPRMAVSGMIFGAQCA WNPMAHIQGEAGCGDGEEGSAAGYADAAADVVRENKAAADGDSPAPLPSSSESDDYTGGA ADAIAGAPAGGDGSCAEMCRRVAEVEYGDRSGGIVEALRDAACRVAFGWDDMVWYCELDE GDGRMNRDAASAMHLGVHGFSGEYGREWEARLLGSTDLDEARRTMLQGLSPHIVRAAEAN EALLCDAMRLGAAAGRASRLGAARRDVPAMLAAIEGQRWFNLVGLCLARRHDVITVDAGD IARASAGLIEPDAGSSAGPEAVQYVSIRVARGLERWFETYCDLWRSVSAESELARIASIV WRCADALRS >gi|197324943|gb|DS990231.1| GENE 63 84373 - 84771 236 132 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MNGSYTSDASVPQPLEMQIDVPATENHPLEAQIPGKLACQGLKNATARGGDALRHNEMPD LTYETRHGSHFRAVSASERRHGNNDRLMPLPRDAPPLMCAWVYERRASAQRHTMEAMRAN SDSALTERHKSQ >gi|197324943|gb|DS990231.1| GENE 64 84941 - 85993 977 350 aa, chain - ## HITS:1 COG:PA1949 KEGG:ns NR:ns ## COG: PA1949 COG1609 # Protein_GI_number: 15597145 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Pseudomonas aeruginosa # 5 334 2 331 337 132 30.0 1e-30 MSSTSSITDVAALARVSKATVSRVLSGRRTKDDNIAKRVRDAAEQLNYQANSAASALRSD TTNTIGLIMPGPTDPLAARLLAELEPEVNRSGRQLLLGLGDDQRTQTERIEAMLARRVDG LVVMPPQDANTAAFLDDHVGMTSLVQAFGHSTSFHVDWVGVDESASMKLMLSHLAEYNAN SIAFLSGNVNSASAAELFATLQTSTRVMNLMTEPGWTTFGDNSAKRGYHDVMRLFGDKGN RPNALICATDDVAIGALMALNQLGIRVPDEVKVIGSGDSPAAAIADPPLSSILPPCRLIA HEALRLISVSASSKHWLPAHTAYPPQLVQRESTSGSRFGSSDMALPDDES >gi|197324943|gb|DS990231.1| GENE 65 86323 - 86772 735 149 aa, chain + ## HITS:1 COG:Cgl2978_1 KEGG:ns NR:ns ## COG: Cgl2978_1 COG1762 # Protein_GI_number: 19554228 # Func_class: G Carbohydrate transport and metabolism; T Signal transduction mechanisms # Function: Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) # Organism: Corynebacterium glutamicum # 16 147 15 144 178 117 50.0 6e-27 MVADIDGFLPDSAFLLDVPATDWKDAIRLAGKGLVAAGFTTDAYTDQMIETVEKMGPYIV IAPGLALAHSRPSEAVLKTGLSWVRLSTPVKFGNKANDPVSLVIGLAGHDENEHITVMSA IASALINPKKTAALATAPTPEAIRDILHQ >gi|197324943|gb|DS990231.1| GENE 66 86896 - 87168 477 90 aa, chain + ## HITS:1 COG:BH0222 KEGG:ns NR:ns ## COG: BH0222 COG3414 # Protein_GI_number: 15612785 # Func_class: G Carbohydrate transport and metabolism # Function: Phosphotransferase system, galactitol-specific IIB component # Organism: Bacillus halodurans # 1 87 1 85 89 65 42.0 3e-11 MNILCVCGNGIGTSVLLKVNVESVAADLGVDVNVTTSDAGSAKGTANMNDLVLTSAELAP ELEGTTTPVEVITNFMDTDEIKSVLEKYAD >gi|197324943|gb|DS990231.1| GENE 67 87234 - 88751 2103 505 aa, chain + ## HITS:1 COG:Cgl2977 KEGG:ns NR:ns ## COG: Cgl2977 COG3037 # Protein_GI_number: 19554227 # Func_class: S Function unknown # Function: Uncharacterized protein conserved in bacteria # Organism: Corynebacterium glutamicum # 10 494 9 494 513 451 56.0 1e-126 MNVVVQVLNFISQEILNVPAYLIGIIAAIGLIALKRSAGQVVSGALKAAMGYLILGAGAT VVTSALAPFGDLVLKSTGAHGVVPTNEVITAQASSQYGASSAYIIVLSFIVMLLLARFTP LKYIFLTGHHMVFMSTMLAVVLSVGFGTDHQLLIVIIGAILMGVIMVVMPAFAQPFMNRV TGSDKLSIGHFNTLGYIVSGAVGAGVGKKSKSTEDINFPKGLSFLRDSMVSTTLLMVVLY LVFSVWAAIVLPAKEAFKIFSTNPDNYGSFFMAAFAQALQFGIGVSIILYGVRIILGELV PAFQGIANKVVPGARPALDIPIVFPYGANASLIGFLGSFVGGLVALAIIAVWLGPVWGVA LILPGMVPHFFDGGGAGVFGNATGGRIGAIVGSFINGLLITFLPAALMTVMGSFGLANST FGDADFCWFGTITGNMAHLGPVGGAICLLIFAAVLFAAAWIWQVKVVNTGWTPGAKHAEY IEQVKAEEKAAKAAARAAKKAAAEA >gi|197324943|gb|DS990231.1| GENE 68 89114 - 89863 288 249 aa, chain + ## HITS:1 COG:Cj0620 KEGG:ns NR:ns ## COG: Cj0620 COG1451 # Protein_GI_number: 15791980 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase # Organism: Campylobacter jejuni # 158 243 128 213 215 63 31.0 3e-10 MARMPLPNQRRHARKAPASASTAAASTVLEVDGLQLHVTRKRIKNLYLRIKPPLGTVEVS APMRMSQRQIIGFAHERHSWIVQQQRRMAEARRMSLRQAETLTPLPSAPAGDGEHAGVDG RRGGDQPQLPMFDRSAMWTDERKHAAAAAIDAALPGLLRKWAPIVGRSPSHVTLRVMTSR WGSCTPKTGRIRLNLQLGLMEPRFLEYVLVHEMTHLWANGHGADFQRRMSAYLPSWRELR RELNKRVLL >gi|197324943|gb|DS990231.1| GENE 69 90050 - 90529 818 159 aa, chain - ## HITS:1 COG:Cgl2943 KEGG:ns NR:ns ## COG: Cgl2943 COG0783 # Protein_GI_number: 19554193 # Func_class: P Inorganic ion transport and metabolism # Function: DNA-binding ferritin-like protein (oxidative damage protectant) # Organism: Corynebacterium glutamicum # 5 158 4 156 165 128 43.0 5e-30 MTLAFVVPGLDEAASEKAIAILQNRLSQEQEAALVLKHAHWNVTGPNFIAVHEMLDPEVE AVLAQADETAERIATLGGTPDGRADAITRNRTWKPFDVDGRAGTEKYLEALIEYYDAFIA DDRKAIAELDELDVISSNIIQDHVQELEKFQWFMRSHLA >gi|197324943|gb|DS990231.1| GENE 70 90859 - 91026 80 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no MGWGSGRPGQPHRDANRPYLHAPFRRGVPAVYSSVSAGTDADDGEWRLTALTDAN >gi|197324943|gb|DS990231.1| GENE 71 90972 - 92045 646 357 aa, chain + ## HITS:1 COG:RSc2109 KEGG:ns NR:ns ## COG: RSc2109 COG0697 # Protein_GI_number: 17546828 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; R General function prediction only # Function: Permeases of the drug/metabolite transporter (DMT) superfamily # Organism: Ralstonia solanacearum # 21 357 6 295 316 186 37.0 5e-47 MVDSRRDVAGQAGRSPSPSVQATMIGLMAILLWSLMTGLVRVVADAFGATLGSALIYTCG AVLLLVFRRPAPLRKYPRTYLIVGGLLFVFYESSISLSIGLASSAASSVEVSLVNYLWPT MMVLLAAAFVPSGEKRSARNEGIGREPAAPSDAQAQDDSVQCGTNCSAGKPPRHSRGRAV LRVLPGAVVATAGVILAVGGNSGLDWALAAGHVAANPLPYLLAFAGALAWSVYAVFTPAL SKGFDGTSVFFPFVAVALWIIHFASGQGWPSAAPSVWGYLAVVAAAAVIAGGYACWGYGI LHGSMSTLAMASYATPVLSTAASAVLLGLSLTLPFWCGALLVAAGSIINWWISSQRR >gi|197324943|gb|DS990231.1| GENE 72 92081 - 93403 1856 440 aa, chain - ## HITS:1 COG:sll0260 KEGG:ns NR:ns ## COG: sll0260 COG1253 # Protein_GI_number: 16331101 # Func_class: R General function prediction only # Function: Hemolysins and related proteins containing CBS domains # Organism: Synechocystis # 2 428 5 432 448 230 32.0 4e-60 MSLGLNILLIFIFLVLGSIFSGTELALVSLRGSQIDQMEQEDARGARVAAIARDPNKFLS TVQIGVTLSGFLSASFGESSISPFIVPVVKSWGVPANIAAPLTTIVLTLIISYCSIVISE MVPKRIAMQRTEQIARAVVPAIDVFAKVCKPIIWLIGKNTNGIVRLLGFDPNETESEVSD EELRVLVNTNTSLSKDERTILDDVFDASETIVAEVMRPRADVVFLDGSQSIKDAAAYVRE MPYSRYPVTGRDFDDVIGFVHVRDLLDVRDPNATTVADVTREGISLPGTSKLLPSLELLR KRGIHLAVVIDEYGGTDGIVTLEDMTEELVGDIRDEYDLPSEPGGERKEQPAFVSGVATI DASMTIEDFADLTGIELEDGPYETVAGYFLAHTGKMGAEGDVLHSDDGYDMTVTKVDGRR IETIEVRKAGAPDHAPVSAE >gi|197324943|gb|DS990231.1| GENE 73 93612 - 94187 593 191 aa, chain - ## HITS:1 COG:BH3241 KEGG:ns NR:ns ## COG: BH3241 COG1609 # Protein_GI_number: 15615803 # Func_class: K Transcription # Function: Transcriptional regulators # Organism: Bacillus halodurans # 32 175 6 143 333 89 37.0 3e-18 MRHAARAHTVTHPAQRDAFETPHPQRQRAARFDVARPAGVSTAVVSYVLNGSPKKISPDT AQRVFDAAQRLDHHPNSVARALKTGTTHTLGVIVPDFSNPYFAEFTDQLEAAASKRERAL IINLSRGDPQGERRRINELVERNVDAMFVSSAQTDAELARCAVNAALDPAHTPDVQLIAA ELVTRQSCGCK >gi|197324943|gb|DS990231.1| GENE 74 94304 - 95053 677 249 aa, chain - ## HITS:1 COG:Cgl2616 KEGG:ns NR:ns ## COG: Cgl2616 COG0288 # Protein_GI_number: 19553866 # Func_class: P Inorganic ion transport and metabolism # Function: Carbonic anhydrase # Organism: Corynebacterium glutamicum # 31 245 7 199 207 139 40.0 6e-33 MLAHTGTYTPTRREPETRNGDVMAEEDPDQESTANSTLSRMLAGNRRFAEGHSEHPWQDM QTRESLIDRQNPDAAVLSCSDSRVPPEIIFDAGLGDLFTIRTAGQIIDDAVLASLEYAVD HLHVSLLMVMGHEGCGAVALGAEQLDALIADSTSDPESSLESADAMAELDERIASSDSIV LRSVGMSVWQAREAELDTSEDFERVHVARTIEELVTRSEIIQDALAHDRLMIVGARYQLS TGKVEVLSF >gi|197324943|gb|DS990231.1| GENE 75 95270 - 95833 875 187 aa, chain + ## HITS:1 COG:FN1983 KEGG:ns NR:ns ## COG: FN1983 COG0450 # Protein_GI_number: 19705279 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Peroxiredoxin # Organism: Fusobacterium nucleatum # 1 187 1 188 188 235 59.0 3e-62 MTLLQHELTDFTVQAFQNNEFHEVTKADVLGHWSVFFFYPADFTFVCPTELEDLAAKYED FKKIGCEIYSVSCDTHFVHKAWHDANEKIAKIQYPMLADPTALLAKDLDTYNEADGVAER GDFIVNPEGKVVAYEVISSNVGRNADELLRRVQASQFVYEHGDQVCPAKWTPGEETIEPS LDLVGLL >gi|197324943|gb|DS990231.1| GENE 76 96176 - 98089 2003 637 aa, chain + ## HITS:1 COG:FN1984_1 KEGG:ns NR:ns ## COG: FN1984_1 COG0492 # Protein_GI_number: 19705280 # Func_class: O Posttranslational modification, protein turnover, chaperones # Function: Thioredoxin reductase # Organism: Fusobacterium nucleatum # 9 322 4 316 332 300 50.0 7e-81 MTQINRSDLYDVVVIGGGPAGLTAGLYLARARYRVLILEKDDFGGQITITDEVVNYPGVG HTSGRALTQTMRNQAKDFGAEFLSAEATGLDVNGDIKTVHTSRGDLKTFGILIATGASPR KLGFAGEGEYAGRGVAYCATCDGEFFTGREVLVVGGGFAAAEESVFLTKYASKVTVLVRE PDFTCDAAVSAEAKNNPKIDVRYNVELKGVTAGQGGLREATILDRGTGETESWKPSDDGT FGVFVFAGYVPATELVRGVVELDDHGYVVTRGYLETSVPGVYAAGDLRVKNLRQVVTATA DGAIAAVELERYAKQMSEKTGLVPPRPTASAYEQAEAQTAAAANSAAAAGTTPAPAPAKR SADTAAASAAAKKPGELFSAAIKQQLGVVFGRMTRPVTLVLELDDTPLSTELQGFIGEMV ALSNGKLNSVAVDAAGVITAEDGSSAPTSLTVGEPLAVTLPDGAELPVYGSLDDSGRAQF DVSGVLPSARPVVRMCVPAENSDAGTLLFTGLAFHGVPSGHEFNSFVLGLYNAAGPGQPL DDDLKARAEAIDTPIDVMILVSLTCTMCPETVLAAQRIASLNPNVRAEAYDVAHFPELKD QYGAMSVPCIVINHPGGEQKVEFGKKSVPQMLTLLGA >gi|197324943|gb|DS990231.1| GENE 77 98198 - 99844 932 548 aa, chain + ## HITS:1 COG:DR2199 KEGG:ns NR:ns ## COG: DR2199 COG2865 # Protein_GI_number: 15807192 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Deinococcus radiodurans # 21 470 30 467 596 141 29.0 3e-33 MLPTKESLTVEFKSERQRPQTDDEIVDNVVAMANTEGGTLYLGVEDDGMVTGVCDRHRNV NGLAAFIFNKTVPQLSVRVTLLSESGKPVVGIEVDSSQQIVSTSQGKTLQRRLKADGAPE VVPMFPAQFISRLSQQRSYDYSAQPAPGSTLSDLDPSARDRLRESIRTANAGSSLLAFDD EDFDRALELVVDGPGGPQPSVAGLLVIGTERALKRSVPSASAVFQVMKGTSPKVNTDPFF LPLVDMLPRIGALMEPWNPDHEVMSGLVHVNLPDFDHQAFREAAVNAFCHRDYARMGSVR FLVDDDGLTISNPGGFIEGLSENNLLTAQPRSRNPQLASILKTAGYAERTGRGVDKIYAG SLASGGAFPDYSQSTASEVVLFLRRVVPDEAFVVMIANEEARRGAPLSVWSLIVLSLLRE HRRLSVAQMREFSRVESRRLVGAVESLVESGLVEACGSGVARDYMLSARVYKRDDKLPAY ARQKGLDGRRENLVTEFALNNGGAATTSDVMKLLDLSYISAYRLMKRLEGEGVFRHEGSG PSSRYALV >gi|197324943|gb|DS990231.1| GENE 78 100133 - 101419 1804 428 aa, chain - ## HITS:1 COG:BH2528 KEGG:ns NR:ns ## COG: BH2528 COG0477 # Protein_GI_number: 15615091 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Bacillus halodurans # 5 406 4 395 419 199 36.0 7e-51 MARFTENRWTSAIIPALLIHIPIGTVYCWSVFKQLIADRLNASPASVEWGFSLAIFFLGM SAAFAGPMVEKNIKKSALVSMVCFVVGFAGTGVSIALNFLPGVFICYGAIMGIGLGVGYL TPVKNLMLWFSDNKGLATGIAVAGFGLAKAIASPLMEYLIGTVGLVNMFFILAVIYAVMM FFGFLLIKRPADWVYDPVTSHVSRAEILRKPVFWGIWIAFYINITCGLALISQEKDILHD VLKAFPQYAGLSPAKFAAAIAGIIGLVLAVDSVFNTAGRVGFSTLSDHLKRRETVYQVIF IMSIAVCLLQIFTNSINNALLWAVLAMLFLINAGYGGGFSTLPVLLDQHFGTKTVSTTHG LALSAWAFAGLSGNQLASFVVTHTPDQAHRYAALIPVLTGLFALALISISLVKYLGGRNG EGKRSIGA >gi|197324943|gb|DS990231.1| GENE 79 101917 - 104673 3769 918 aa, chain - ## HITS:1 COG:all4861 KEGG:ns NR:ns ## COG: all4861 COG2352 # Protein_GI_number: 17232353 # Func_class: C Energy production and conversion # Function: Phosphoenolpyruvate carboxylase # Organism: Nostoc sp. PCC 7120 # 86 918 20 982 982 363 30.0 1e-100 MTDTDQQITPADATIVSTGTGTKGPEERELPESLSNDMSLCLRILRDVLGEYDPQLLATF DTVRNYAVKASAEHFAGATADPHPDEDGLAKAVATIDAMNLHDAQLLARAFATYFHLANL SEENYRVSVLHQRENQVEDDEAVDPVNELTTAYHQLLTEMGPAKAKALLEKLEFHPVFTA HPTEARRKAVEGKIRRIAELLEENKRLGGSDKKENVRRLYNEIDALFRTSPIALKKPTPV EEADTILDIFDNTLFTTIPKVYHRFNDWLLGDKAGLEQPQCPAFFHPGSWIGSDRDGNPN VTAKVSRQVARKFSDHVIGALEEATRTVGRNLTMESETTPASAELKSLWSHQKEMSERLT DKAALISTKELHRAVMLVMADRLRYTIERDADLMYHSCDDFIADLQVVQRSLAEAGAKRS AYGPLQDLIWQAQTFGFHMVEMEFRQHSVVHARALEDIREHGLHGERGELQPMTHEVLDT FRALGAIQKRNGIKAARRYIISFTKSAQNVRDVYELNRLAFSHPEDVPVIDVIPLFEQLE DLQNCVNVLEEIVKIPEVQARLKATGNKMEIMLGYSDSSKDAGPTTATLALHSAESRIVA WAAKHDIDLTLFHGRGGAVGRGGGPANRAVLAQPKGSVNCRFKLTEQGEVIFARYGNPVL AIRHLESVAAATLLQSAPSVEKTNTEMTEKYAQMTEVLDNASHERFLDLLNTPDFAPWFS IVTPLTEVGLLPIGSRPAKRGLGAKSLDDLRTIPWVFSWAQARINLAAWYGLGSACEKFG DLDTLREAYEEWPLFSTFIDNIEMSLAKTDERIAKMYLALGDDENLSKKVLDEMKLTTKW VLKIVNDEWPLQHRHVLGQAIRIRSPYVDALSVTQVLALRSLRKKVDKEELSKSQQAGFI YLILCTVSGVAAGLQNTG >gi|197324943|gb|DS990231.1| GENE 80 104752 - 105063 77 103 aa, chain - ## HITS:1 COG:no KEGG:no NR:gi|313141137|ref|ZP_07803330.1| ## NR: gi|313141137|ref|ZP_07803330.1| predicted protein [Bifidobacterium bifidum NCIMB 41171] predicted protein [Bifidobacterium bifidum NCIMB 41171] # 10 103 1 94 94 168 100.0 1e-40 MGVLGRVFEMVTVVILTPRRELMGYDRNRRSHDGLPSTRLWTIRRRGYSGRHSRAIQQRE DIVKVACLPVILQRKIGLRNTTCDFRAIEWAHSFWRNRLWARN >gi|197324943|gb|DS990231.1| GENE 81 105084 - 107075 2590 663 aa, chain + ## HITS:1 COG:PM1895 KEGG:ns NR:ns ## COG: PM1895 COG2966 # Protein_GI_number: 15603760 # Func_class: S Function unknown # Function: Uncharacterized conserved protein # Organism: Pasteurella multocida # 334 511 100 260 262 62 31.0 4e-09 MIRIEKNMQQHKNGDAPHQDAATAVSHFHTHSVPLDMEDIRRDWDKPISEAGLAAKTSVV VRVGALDLGAGTGSFRVREMMHRIAYPLGVHVRADVNLTDIEATCTDDANRITEVIDLPT TGVNTERIWLLEHYTDWFSVNLGLDSMYHRAGDVSEGVVQNLEQSDMSEVSAQLAKKLRA EKKAQKELSGEASDDPVLDALEAAEVTVPVSMVRAAAADITAEGSTDDELRSESEAALKE DREAKLLHDRLMQQRSGKHDFAETPDLDAAAAAAGGAGAGASSAEDQNLNEFGTSMSAEA LLGAKRRKTRAHKPLTGEYAEHFDHVGRSAGEGRKTITVRQAHERLDLIESRKPLYSPAF AGFASAVACASFVFLLGGGPYDMIGAFVGAGLGHWLRRKLFARHLNQFFVTFVCVALAAL ACTGTLRLIGLLDPIALTHDTAYIGAMLFVIPGFPLITGGLDMAKIDFPSGIQRVAYVLC IILMATLAGWGVAMIVHLNPTGFEPLGLNPWVNTGLRAVTAFLGVWGFSIMFNSPQRMCL VAATIGMITDTLRLTLVDFGVPAEAGAFIGALLAGLLAAGWRTAVHNGLLPPHLGYPRIC LTVPSIVIMVPGLYMYRAMFYLGQFDTLHALDWAFRAFMVIICLPIGLAMARVITDKSWR YDV >gi|197324943|gb|DS990231.1| GENE 82 107148 - 107969 305 273 aa, chain - ## HITS:1 COG:PH1139 KEGG:ns NR:ns ## COG: PH1139 COG1574 # Protein_GI_number: 14590967 # Func_class: R General function prediction only # Function: Predicted metal-dependent hydrolase with the TIM-barrel fold # Organism: Pyrococcus horikoshii # 33 245 274 493 494 105 31.0 8e-23 MEAGVYPERLEDAIEAGWKTGVELPGSDGLGHVGAMKMISDGSLNTRSAFCSMPYSDIFP DFYGTLSYAPDQIEAYFHVATCHGFAIACHAIGDEANTIVLNAAASTHAHGSIEHAQMLK PADIPRFAKLGLTASIQPQHAMDDRDVITRFWANLGGIPYAFKALHDAGVRLRMGSDAPV APLDPWMAISAAVFGTESSDREPFQPEQCLDARTALAASTAVGRDRPEPGDPADLVLLDR DPYAVSTPEEMRAMPVAATMLAGRWTYSSLHGE >gi|197324943|gb|DS990231.1| GENE 83 108078 - 108239 260 53 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0040 NR:ns ## KEGG: BBIF_0040 # Name: not_defined # Def: amidohydrolase 3 # Organism: B.bifidum # Pathway: not_defined # 1 53 1 53 363 105 98.0 5e-22 MGELEWFDAYCKLDNAPGAAEETLELIRKAEADAARKGVVGIRDYEMAENVDT >gi|197324943|gb|DS990231.1| GENE 84 108816 - 109835 318 339 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0045 NR:ns ## KEGG: BBPR_0045 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 339 1 339 339 683 100.0 0 MGGSIALVQLTELKHQRMKQCAEFQQRSRWQPPYALTTALELQAIEIPRLPKGRAMLNGI TVVVPSANERRNLVGINEVTWSFPVDVVMVEQCLCVSPACTWAMFAGWLNLEELIVLAES MMRRDGRLRRTTIEELTAYLDSAREFTEAVFEETGRRPNMFRGYANCRRALRVIQEGTDS SMETRTRLVPLKYGIDAPCVNYKIGVKRLNRAVYLDLAYPEYKICIEFDGGHHAGQWLED ARRRQAIEDEKWRYIQVTKLDLGDEWSEEALARRIADKIQEVTGIPVPVTARKTIQQVCD ARAMRRKPLYERIGFEPLLPRVPNANADFPDADDLDGIA >gi|197324943|gb|DS990231.1| GENE 85 110310 - 111407 1696 365 aa, chain - ## HITS:1 COG:DR1093 KEGG:ns NR:ns ## COG: DR1093 COG0180 # Protein_GI_number: 15806113 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Tryptophanyl-tRNA synthetase # Organism: Deinococcus radiodurans # 43 361 25 346 351 221 43.0 1e-57 MTDQEQQQLTAAGNEMSASFLAAKKRSDATLAKLEAEPGKFTMLTGDRPTGRLHLGHYFG SIKERVAMQNRGVNTNIIIADYQVITDRDTTEHIQDNVLNLVLDYMAAGIDPTKTMMFTH SAVPAENQLLLPFLSLVTEAELHRNPTVKSEMEASGHALTGLLLTYPVHQACDILFCKAN VVPIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGN SIMLGATAEETAKLIKKSPTDSERKITFDPIARPQVSALLTTAGLVTGRDPKDIAAEIGD AGAGALKAYVIESVNEFLAPHRERRAELAKDMDSIRDILHDGNARANAIAEETLDQVREA MGMKY >gi|197324943|gb|DS990231.1| GENE 86 111533 - 111928 467 131 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0043 NR:ns ## KEGG: BBIF_0043 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 6 131 1 126 126 144 100.0 1e-33 MPGGHMGRGRQKAKQQKIARKLKYLTTDTDYDELAKELSTQEPGEGSPDPFADIEASYSH DANAAVDNTQGSVAEDDLDEYAKWAAEAAAKATSGEMPAVKAPESQAPKPKPMPRKPIPM PMPAALKPKKA >gi|197324943|gb|DS990231.1| GENE 87 112177 - 112689 450 170 aa, chain + ## HITS:1 COG:CAC1581 KEGG:ns NR:ns ## COG: CAC1581 COG3279 # Protein_GI_number: 15894859 # Func_class: K Transcription; T Signal transduction mechanisms # Function: Response regulator of the LytR/AlgR family # Organism: Clostridium acetobutylicum # 1 144 59 204 234 84 29.0 1e-16 MGSMDGVALAKAVRKAGGTMQIVFVTGYSDYIAEGYDVEALNYLMKPVDAAKLFDVLDKA VARMRRDSRCLDLQCAEGLMRIPLADIRYLDVRRNYVTVHADRDYTEKRPLGEFEAELGD GFCRVGRAMIVNLRRIRCVGRLSVQSTDGTTLPLPRGAYEPLNRTIIDQT >gi|197324943|gb|DS990231.1| GENE 88 112771 - 113040 163 89 aa, chain + ## HITS:1 COG:no KEGG:BBPR_0049 NR:ns ## KEGG: BBPR_0049 # Name: not_defined # Def: putative histidine kinase-related ATPase (EC:2.7.13.3) # Organism: B.bifidum_PRL2010 # Pathway: not_defined # 1 52 1 52 201 114 100.0 2e-24 MWFRGRGKADRAIAAYQRELVDTHYREVENMYRQMRMWRHDYRNHLQTMKALAANGDLAA LRDYLTVSIPSSRRWIPRSSPAMRWPTRF >gi|197324943|gb|DS990231.1| GENE 89 113022 - 113381 277 119 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0045 NR:ns ## KEGG: BBIF_0045 # Name: not_defined # Def: two-component sensor kinase # Organism: B.bifidum # Pathway: not_defined # 1 91 32 124 171 181 96.0 1e-44 MADAILSSKMSLAQAHGIDVRVDAHIPIKLRISELDLCCVLGNLFDNAIEANDGLPEADC MIRVYMDMKGTQLYISFTNASSGGKQRKVGGASAPPNQTRGTVSGWSTSTRSSRPRAAT >gi|197324943|gb|DS990231.1| GENE 90 113625 - 114650 1011 341 aa, chain + ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 10 336 3 338 346 459 63.0 1e-129 MACSGVFEPRNILVTGGCGFIGANFVRYVARNHPHAHITVLDKLTYAGNPENIAGLPPSQ VDLVVGDICDVALLERIVPGHDAIVHFAAESHNDNSIANPEPFIRTNVEGTMRLLEAARQ HDVRFHHISTDEVYGDLALDDPARFTEDTPYRPSSPYSASKASSDHLVRAWVRTYGLRAT ISNCSNNYGPYQHVEKFIPRQITSIMEGARPKLYGTGENVRDWIHTEDHSRAVWAILTRG RIGETYLIGADGEMSNIAVLRMILQLMGQPEDAFDWVHDRPGHDRRYAIDASKLRAELGW SPMHTDFASGLRNVIDWYAEHRDWWAPAKEATEARYRAQGQ >gi|197324943|gb|DS990231.1| GENE 91 114662 - 114877 311 71 aa, chain - ## HITS:1 COG:no KEGG:Blon_2391 NR:ns ## KEGG: Blon_2391 # Name: not_defined # Def: acyltransferase 3 # Organism: B.longum_infantis_ATCC15697 # Pathway: not_defined # 1 71 339 409 409 121 91.0 1e-26 MYLAHSPLSKVLIGPRIPAPTDGWSYAGISVLMFAATLLAALAFAVVADTVVLKPVQRLL RNVGLPRKGRL >gi|197324943|gb|DS990231.1| GENE 92 114993 - 117569 2296 858 aa, chain + ## HITS:1 COG:CAC0706 KEGG:ns NR:ns ## COG: CAC0706 COG2730 # Protein_GI_number: 15893994 # Func_class: G Carbohydrate transport and metabolism # Function: Endoglucanase # Organism: Clostridium acetobutylicum # 563 857 423 717 722 80 24.0 2e-14 MVSPHHLLKIATALSAVALTASVAVTPAYALQDIAIEDAVAQSGPVTADNGVVVQSDDQS QDGMPDNPNAKLPDTVSDEISDDATVVSEDLAVTPEGEVKNIETGETVTDATLVGTQDQQ PDPLAKTNGESFIPVSAEDVKNAVADANVQLSKFEGNEYGAHWGTYNNTKAFFDYQNNLF VQQAKGVIDVSEWQGDIDWAKAKADGVEGVIIRLGYGWGNNADKKAQRNISECKRFGIPF GIYWYSYADTPSIAKEEGAGVVAKLKRFGVRASDLAYPVYYDLEKWTWKGHQPPTDPNVY NDIVNNWYGALQSAGYKNLGVYSYTSYLQGPLKHADIYAKTTWVAQYGARMGFNSFPTNS RGWQYTSSGKVGGIRGNVDMNAFGNKEYVNGGSSNDLQAAIDVRRMTAVTIPNGNYYINV RSKVASSVDIPGGSAADSTAIQLYSGNSSKAQQFTFTRQSDGSYEIVNVNSGKALDVRNG VAENNAVVQQYSRNNSQAQRWFIRDSGAGYYLQSALGNWVLDLSGGNTANGAAIRLYAPN GTASQLFVVSSSDVNIATGVSMIITSVANKKLVTDVTGASTANGARVQLYSSNNTNAQKY RFGSIGNGTYKIINANSGKVLDVSGGSTANGAALQQYTSNNTVAQQWTVRNYGSGRIALV SVNANKAVDIPGGNAVQQAQLQLYSPNGTVAQQWLVAKAPLTLRERLNETAAKHRQDLPD GTYTFGSKLNTSMKMDVSGASRSNYGNVQIWAGNGTNAQKWKVTHDSNGYVTLTSVNSGK VLDVNGGVSASGTNVQQYDSNGTYAQKWIAVKNSDGSYTFQSALAENIVLDVSGASTSNG ANVQLYTANGTNAQKWVK >gi|197324943|gb|DS990231.1| GENE 93 117592 - 117672 100 26 aa, chain + ## HITS:0 COG:no KEGG:no NR:no MAEDKYLFALGHIWNLCYFWRRIMAN >gi|197324943|gb|DS990231.1| GENE 94 117642 - 118592 1122 316 aa, chain - ## HITS:1 COG:CAC2324 KEGG:ns NR:ns ## COG: CAC2324 COG0463 # Protein_GI_number: 15895591 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Glycosyltransferases involved in cell wall biogenesis # Organism: Clostridium acetobutylicum # 11 309 3 303 315 327 52.0 2e-89 MLVPENQSPTVAVLLPCYNEEVTIGKVVRDFKASLPQADIYVYDNNSTDRTADIAASEGA IVRKEPRQGKGNVIRAMFEDIDTDVYVMADGDDTYPADAAPAMVDKVLEGYDMVIGDRLS STYFQENKRPFHNFGNRLVRGSINGPFHANVTDIMTGYRAFSFTFVKTYPVLSRGFEVET EMTIHSLNNNLRLFEMPIQYRDRPEGSVSKLDTVGDGIKVMSTIFRMIREYKPLPFFGGL GVILGIIGIVLCGSVTVDFWHTGMVARFPTLIGAVMLVIAGLLLFITGIILDVMAKNDRK AFIIDANQFAMMRRQK >gi|197324943|gb|DS990231.1| GENE 95 118960 - 121149 1417 729 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0050 NR:ns ## KEGG: BBIF_0050 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 1 729 1 729 729 1375 99.0 0 MGAQAASAKNPNVKAVPAQWVRLALTLLVAAIISCGCVKAYPWFSAKVFNLTLAGADLHI KLLRLAILFPIWTLVCSWFSFGLPMVGDWLHRNRFRLGAAIILAAVVLNVSGSSMAVWNI WLGRNGTQDLVFGTPRPIRTDEYVVGTPLAFSQAYNNYGYFNGLFGDKPADMFIIKDAPA WFPTEVFRPFHWGYLLLGSSAGLAFYWSARLVVLFLSAYQFFLCVGGDKKPVSRPMAVFG ASLITFAPLTQWWFAVNGLPEMLIAVFVSICCFDHMLQRQETWVRLLCGAVIMQCAGMFI LTLYPAWQIPMGYILLGLIIAMVIRHWGKIRFKPVQIVGLVVIGLVFTTLLGLALLKSAD TIRAMMSTAYPGSRMSKGGGQSPLLMFSSLATLCLPFKDFYESAMLTGNNVEVAAFIDLC PLGMLFAVMNMIKRKKANFLDCYLIAFLVFMSVFAVVGFPAWLSKLTFMSSVTSSRTTVA IGVCNIILLIRCAREWCANHSVKAKAVVAVVYTVCAAVIAYMVFSPYLDVTMTISCAAAG FVLAAAVVSCDLKVGKIVATLATLVMAFSGFAINPVQYSSAPITDQPVVQQVRILQEHKP GVWVAEGGNCARLANLLVANGVKTFNALAVTPDLQGMKRLDPDGTWQRIYNRYAFISINI VDKPVEKPFKLSANDAYTITVTPEQLERLGVTYVLSTNDLNKRRFDGYRFVKIGETVSGE TPYEVQRIN >gi|197324943|gb|DS990231.1| GENE 96 121257 - 122279 1414 340 aa, chain + ## HITS:1 COG:SPy0936 KEGG:ns NR:ns ## COG: SPy0936 COG1088 # Protein_GI_number: 15674955 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-D-glucose 4,6-dehydratase # Organism: Streptococcus pyogenes M1 GAS # 9 337 3 340 346 477 68.0 1e-134 MSEELFTPKNIIVTGGCGFIGSNFVHYVVDNHPDVHVTVLDALTYAGNIANIAGLPEDRV EFVHGNICDAELLDRIVPGHDAIVHYAAESHNDNSIANPEPFLKTNVEGTFRLLEAVRKY GVRYHHVSTDEVYGDLALDDPAKFTESTPYHPSSPYSSTKAASDMLVRAWTRTYGLRTTI SNCSNNYGPYQHVEKFIPRQITNILDGQRPKLYGKGENVRDWIHTEDHSSGVWTILTKGR IGETYLIGANGEKNNITVLRMILKMMGRDEDAFDWVKDRPGHDRRYAIDSTKLQTELGWR PTHTDFESGLRATIEWYTENRAWWEPAKAATEARYKQQGQ >gi|197324943|gb|DS990231.1| GENE 97 122287 - 123963 209 558 aa, chain + ## HITS:1 COG:DR2199 KEGG:ns NR:ns ## COG: DR2199 COG2865 # Protein_GI_number: 15807192 # Func_class: K Transcription # Function: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen # Organism: Deinococcus radiodurans # 100 467 88 470 596 70 28.0 7e-12 MSDEAELEALLRQLIVDWENEVVEFKAAGEDYSTGTIGKYFSALSNEANLRGNASAWLVF GVDNKTHTIVGTKYGKEPERLSQLKMQITRDTEPRSSFKDIHELNLPEGRVLMFEIPPAP TGLPVSWQGYWHGRSGESLVALTADKMDRIRSETDINDWTAEIVQDASLSDLDEEAMRHA RSAFAKAHANRISEEEIACWTDQEFLNRARVTKNGQLTRAALLLLGKPEAVDKLPAGMFE MTWKLVGQENAYEHFGLPFLLSTTRLYRRIRNIQLRLLPPGQLMPQEVSKYDEQSVMEAL HNCIAHQDYCRGARILVTEYPDRLVFDNSGSFFEGHPDDYILGDKSPDRYRNPFLVRAMG ELYMIDRMGYGIKRMNEVQAGRYLPLPDYDLSEVSKVRLTMYGGVVDQEYTRLLLSNTGL PLPDVLALDRVQKGMAIPEDVVARLRKKKLITGRKPHLQVAPVIAAASDTKAEYVKAHNQ DDMFYQRLIISYLEEFGSASRQDINKLLFTKLGDMLTDDEKNKKVGNLLTSLRREGRIFN AGSRRYPEWELKQGFSAE >gi|197324943|gb|DS990231.1| GENE 98 124077 - 125525 2065 482 aa, chain + ## HITS:1 COG:Cgl0332_2 KEGG:ns NR:ns ## COG: Cgl0332_2 COG1091 # Protein_GI_number: 19551582 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-4-dehydrorhamnose reductase # Organism: Corynebacterium glutamicum # 191 482 2 271 271 244 51.0 3e-64 MDFEKELKVERTNIPGLIVFDLPVHGDNRGWFKENWQRAKMTALGLPDFGPVQNNISFNA KKGVTRGIHAEPWDKYISIATGAVFGAWVDLRPGESFGQVYTTRLDPSKAIYVPRGVGNS FQALEDGTAYTYLVNAHWSLEQKKTYTFVNLADPELDIQWPIPLEESERSEADLHHPMLR DARPMAPRRTMVTGCNGQLGHAIRDYVEEHGLEGFEFNDIDTFDFSDPAQYDRFDWSLYG TIINAGAYTAVDRAETPEGRPVAWKANAQGPALLARVAHEHNITLVHVSSDYVFDGTAEE HDEEEAFAPLGVYGQTKAAGDIAVANAPRHYILRSSWVIGEGRNFVKTMMALSDRVADAR DGLDEVTVVDDQYGRLTFTRDMAEAIFHLLDSGAPFGTYDLTGSGAVRSWADIARKVFDQ ANGNGDRVRPISTAEYFANAKAPVSPRPTHSALSLAKIENAGYHAPDWEETLKTYVAKEL GK >gi|197324943|gb|DS990231.1| GENE 99 125731 - 125997 209 88 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0054 NR:ns ## KEGG: BBIF_0054 # Name: not_defined # Def: transposase # Organism: B.bifidum # Pathway: not_defined # 1 88 1 88 88 124 100.0 2e-27 MAAPGAFMGARPPMDRAHEGDPTRPPAESFGLTPGVPPRRNRTAPWDCDREAHKGRNMVE RVFNRMKHHRKAATRQTGPTRPSSPTSG >gi|197324943|gb|DS990231.1| GENE 100 126057 - 126275 82 72 aa, chain + ## HITS:1 COG:no KEGG:BAD_1377 NR:ns ## KEGG: BAD_1377 # Name: not_defined # Def: insertion element IS6110 hypothetical protein # Organism: B.adolescentis # Pathway: not_defined # 1 71 1 71 110 75 64.0 8e-13 MAKGAGCTPEFRAKAVGLLTESRGSCSSETRAVDQVAGDPGVAPETLRRWSDKTGAAVAA ETRQSAGDAMAS >gi|197324943|gb|DS990231.1| GENE 101 126857 - 127618 635 253 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0056 NR:ns ## KEGG: BBIF_0056 # Name: not_defined # Def: transposase # Organism: B.bifidum # Pathway: not_defined # 1 231 86 316 551 361 98.0 1e-98 MRMLGYPESKELLMAWIDELAPGRRRLRHGPVPEELKRKAVVAVASGRLKSHEAAAELGV QAAVVREWKRQMLAGSKETHVARERRERPGDGGGARPVVPDAPAVAAGSRDAAGLADALA SMEKRLARMQARLDELDADVERQRREKRELDVEIAIRRGALELLGKEPGADPENLTNREK TILVKQISEAQSVSVKSLLPVVGLAHSTYHYRLNAMRRPDRDAWLLPLVEGRSRTARSAT ATSACTWNCRAWG >gi|197324943|gb|DS990231.1| GENE 102 127525 - 127869 437 114 aa, chain + ## HITS:1 COG:AGc3822 KEGG:ns NR:ns ## COG: AGc3822 COG2801 # Protein_GI_number: 15889390 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 10 114 277 381 512 113 48.0 7e-26 MAASLGRGAFENSEKRYGYKRVHLELQGMGITVSAKRVMKLMTKHGMVPLFKSAKRYSSY KGELTRAPENLVNRDFHADGPNMLRVTDLTEFSIPAGKAYLSPLIDCYDGLPVA >gi|197324943|gb|DS990231.1| GENE 103 127909 - 128256 346 115 aa, chain + ## HITS:1 COG:AGc3822 KEGG:ns NR:ns ## COG: AGc3822 COG2801 # Protein_GI_number: 15889390 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 1 113 396 510 512 125 51.0 2e-29 MLSDACSTLGEGDRPVIHSDRGCHYRWPEWIRICEEHKLTRSMSAKGCSPDNAAAEGFFG RLKQEFFHKRSFAGVSMDEFIGMLDDYMVWYRDKRIKTEFGMSIMGRRRELGLVA >gi|197324943|gb|DS990231.1| GENE 104 128219 - 129046 712 275 aa, chain - ## HITS:1 COG:SMa0995 KEGG:ns NR:ns ## COG: SMa0995 COG3328 # Protein_GI_number: 16262989 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Sinorhizobium meliloti # 25 248 28 251 410 145 34.0 6e-35 MPENIIQIDQHMLETRLDRLVTQKVTEILNAMLDAEADEIAGASRYERSGGWKAYRADHY ERRITAKAGTLELKVPKLKGALFESAVVERYRRRGESVEEALIDMYLAGVSTRQVDDISQ LLWGERMPSQTLSDKLKRVYADIDSWRTRPLEREYPYVFMDGVWHRRSWGGSVENVSVLV AVGVDSEGHREVIGVAEGMKEDSASWEQFVRGMIERGLRGVRLVVGDRCAGLVSTVRSML PRAGYQRCMGWCRFVGLLYPCFLIMPRVRARGAGP >gi|197324943|gb|DS990231.1| GENE 105 129382 - 130275 1408 297 aa, chain + ## HITS:1 COG:NMB0062 KEGG:ns NR:ns ## COG: NMB0062 COG1209 # Protein_GI_number: 15675999 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: dTDP-glucose pyrophosphorylase # Organism: Neisseria meningitidis MC58 # 1 282 1 282 288 406 69.0 1e-113 MKGIILAGGSGTRLYPLTTVTSKQLLPVYDKPMIYYPLSVLMMAGIRDILIISTPHDLPN FERLLGDGSQYGVSFSYKVQPSPDGLAQAFLLGEEFIDGEPCALVLGDNIFYGNGLGRTL RKAAAAEHDATVFGYYVDDPERYGVVEFDENKKAISIVEKPEHPASNYAVTGLYFYDERV VEFAKRIKPSARGELEITDLNRMYLEDGSLNVQTLGRGYAWLDTGTMDSLFEAGEFVRTV QRAQGLPIAVAEEIAFENGWIDREQLMKAAEKYGKSLYGKHLKDVADNKIIVKSKHD >gi|197324943|gb|DS990231.1| GENE 106 130315 - 131130 658 271 aa, chain + ## HITS:1 COG:L3425 KEGG:ns NR:ns ## COG: L3425 COG1682 # Protein_GI_number: 15672184 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate export systems, permease component # Organism: Lactococcus lactis # 6 271 3 269 269 228 53.0 1e-59 MKVNELFTRKNWLLLKAMVSTDFKLRYQQSILGYLWSVLKPLMLFAIMYLVFVRFLRFGA DVPHFAVALLLGSVMWNFLAEATNGGMTSVVGHGDLLRKIHFPKITVTIASIMSALINFG INLIVMIFFILINGVHISFKAVLIIPIFAELLLIASGLAFFLGALFVNFRDLSPIWEVVL QAGFYATPIIYPISLVATNIGPQAARFILLNPMAQIIQDARYVLIAPENQTVWQSFSTSL VGLIPVALSVVIFIGGLVFFESRSKLFAELV >gi|197324943|gb|DS990231.1| GENE 107 131142 - 132344 647 400 aa, chain + ## HITS:1 COG:SPy0790 KEGG:ns NR:ns ## COG: SPy0790 COG1134 # Protein_GI_number: 15674833 # Func_class: G Carbohydrate transport and metabolism; M Cell wall/membrane/envelope biogenesis # Function: ABC-type polysaccharide/polyol phosphate transport system, ATPase component # Organism: Streptococcus pyogenes M1 GAS # 6 317 5 309 401 351 60.0 2e-96 MQQTSDIALKVTNVSKSFKLPTEKSSSLKNSLFNLIRGVHGYTIQEVLKDISFEVHKGDF FGIVGQNGSGKSTLLKIISQIYTPNTGSVQVEGKLVPFIELGVGFNPELTGRENVYLNGA MLGFSKDEIDAMYDDIVDFAELGDFMEQKLKNYSSGMQVRLAFSVAIKSQGDILVLDEVL AVGDEAFQKKCQDFFFDAKREKKTIILVTHSMNDVRKYCNKAMLIENGHITKFGKPDEVA NAYSNIFLRRQQAEVAAENNEKKLSTSAACELKDIKVVVSDEERQLLDINEDFVVEATLE CKRDLQGGVFAINLIDQEGRVSVAASTRSCKGEGIFAKGTHRIRFNIGNTLPYGSFHINI AVAEGYDLVLRQENVYNFGIKKDKEYNQVLMHPHIDVSVL >gi|197324943|gb|DS990231.1| GENE 108 132375 - 134033 429 552 aa, chain + ## HITS:1 COG:no KEGG:BBIF_0061 NR:ns ## KEGG: BBIF_0061 # Name: not_defined # Def: hypothetical protein # Organism: B.bifidum # Pathway: not_defined # 49 552 1 504 504 1011 99.0 0 MRDGSRVLITQSAFSGIGGSEVQAFELAQYLRKQGCQVTLFAWMCGSPMSDILQENGFRV LTPESEESSALSLSDFDIIWVQHETLPVQLLKEFVDNTAKSDPLMIFSHLSPYREVYIEH PYTFDLEAKLADVIVFNAPNTRDAQKSEFRSYERMMLYPNPAPLDFVASKHMQSSEMHKI LVVSNHPPKELQEAMSLLSARGYQVDMLIDAIGSEKPAITSAELLDHYDCVISIGKTVQY CLVQGIPVFLYDRFGGPGYLNEGNYELAEYYNFSGRSKPDGYSLHEAMRNAVSNRRTPEE LVSAIEDGYSAAVEFQTSHRNDFVACYSISNAFEAVYEKGIAEKHRKTISDRIYGEYLVE SQKMIGEYVAAHRRLANPNAAFYEQTVQSFAGEGYVFAASDVLEQEQRLKKNNSVEIHVP HGKRTARVDFGESPCVITDLKVNGIERHCWNNASLEMNGTYFFLDPDPQIVIDLGDSVNT RKSDTSLFVSANVYPLSGIPRDVEEHRIADINDLTENLKKIQGSRWWKLHEKMKPVISFA RRMGQIVKRFVR >gi|197324943|gb|DS990231.1| GENE 109 134064 - 136052 1721 662 aa, chain + ## HITS:1 COG:mlr7561 KEGG:ns NR:ns ## COG: mlr7561 COG3754 # Protein_GI_number: 13476282 # Func_class: M Cell wall/membrane/envelope biogenesis # Function: Lipopolysaccharide biosynthesis protein # Organism: Mesorhizobium loti # 10 559 2 540 609 305 35.0 2e-82 MTLVDNSTAKRLGILCFYDKNGRAAKFLDGFLEDLMRNLTDLVVIVNGKIDDEARKMFGK YTDIIMVRENTGLDVAAYKQALLTIGWEKLETYDEVLCLNDTIMGPVYPFKEMFETMSRK DVDFWGITAYAGETVNDEKIPTHLQAYWHAYRRSLVSSQAFHEYWENMPLWKDYAEVTRK HEMTFTKHFAQLGFKWASYIDWRKYKGYSSYPLLYMPMQMLRDDRCPVFKRRSFFVDYSA YFDQTAGQPALDLYDFLKDETDYDVDLIWDAILPNYNIDDIRKALHLDYVLPTVTRNPRT GADVRSAFIYHIYFLDLLGDTCRYISALPEETDLYITTTEDKIDAIRDYMASHGVNHPVT FISVVNRGRDVSALLVAACDVVLSGKYDVIGFAHDKKSSQNQENGHHGTESQGFAYKLME NTLASRDYVENILTLFSNEPRLGQVAPPPPFHALYFAHTLPHDWGANFEITKELLEDRFD IHVPLSPGKPSASAIGSCYWFRVEALKPLFEYGWKYEDFLPEGEMGEDGTVSHAIERANG YICQSQGYYPAWVMSDRYARIEVDSLVYSTAMLMGASSRAHEGESLQTNMHGLYKATNPM RIFPAMRRRLHKGLQFLTAKTIKKMPEPVQNVTYRAAWLPINAVRGVKNAALNVVRAVRW HR >gi|197324943|gb|DS990231.1| GENE 110 136129 - 136533 212 134 aa, chain - ## HITS:1 COG:no KEGG:BBIF_0063 NR:ns ## KEGG: BBIF_0063 # Name: not_defined # Def: glycosyltransferase involved in cell wall biogenesis # Organism: B.bifidum # Pathway: not_defined # 1 134 210 343 343 268 98.0 5e-71 MVAGRLYARMNKVADIDCVLYYWLQSAGSVTHKERSFSFYHDNVAAGITNFEYALEHGVM PARSYYTLIGSVNEEATAPDINESSNRIQYEADLKKKAELLERLTTCQRLQCAALQKIRL FEKGIYDRKVKNMA >gi|197324943|gb|DS990231.1| GENE 111 136858 - 136980 57 40 aa, chain + ## HITS:1 COG:no KEGG:no NR:gi|224284012|ref|ZP_03647334.1| ## NR: gi|224284012|ref|ZP_03647334.1| hypothetical protein BbifN4_09336 [Bifidobacterium bifidum NCIMB 41171] # 1 40 1 40 40 64 100.0 2e-09 MPVEYIVIIRESDIVPVSDIQTGILRFGNSAIFLVDYFDS >gi|197324943|gb|DS990231.1| GENE 112 137280 - 137447 163 55 aa, chain - ## HITS:0 COG:no KEGG:no NR:no TVDGLRPIIAPIARMPVPLPISIWMTWRSSSDRCEYTSPIGATSLPDWFSRQSPI Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:30:54 2011 Seq name: gi|197324942|gb|DS990232.1| Bifidobacterium bifidum NCIMB 41171 supercont2.4 genomic scaffold, whole genome shotgun sequence Length of sequence - 5572 bp Number of predicted genes - 0 Number of transcription units - 0, operones - 0 average op.length - 0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - 5S_RRNA 47 - 160 99.0 # CP001095 [R:2755253..2755368] # 5S ribosomal RNA # Bifidobacterium longum subsp. infantis ATCC 15697 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 347 - 1499 94.0 # AE014295 [D:1910860..1913926] # 23S ribosomal RNA # Bifidobacterium longum NCC2705 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - LSU_RRNA 2164 - 3043 94.0 # AE014295 [D:1910860..1913926] # 23S ribosomal RNA # Bifidobacterium longum NCC2705 # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. - SSU_RRNA 3846 - 5361 100.0 # AB437356 [D:1..1519] # 16S ribosomal RNA # Bifidobacterium bifidum # Bacteria; Actinobacteria; Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium. Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:30:55 2011 Seq name: gi|197324941|gb|DS990233.1| Bifidobacterium bifidum NCIMB 41171 supercont2.5 genomic scaffold, whole genome shotgun sequence Length of sequence - 4211 bp Number of predicted genes - 6, with homology - 6 Number of transcription units - 4, operones - 2 average op.length - 2.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 . - CDS 172 - 435 295 ## EcSMS35_B0004 regulatory protein Rop 2 1 Op 2 . - CDS 467 - 730 200 ## COG0582 Integrase 3 2 Tu 1 . + CDS 818 - 946 76 ## ECSE_P1-0012 hypothetical protein 4 3 Op 1 . - CDS 1002 - 2192 558 ## COG0477 Permeases of the major facilitator superfamily 5 3 Op 2 . - CDS 2265 - 2477 257 ## G2583_0957 hypothetical protein - Prom 2692 - 2751 80.3 + Prom 3165 - 3224 80.3 6 4 Tu 1 . + CDS 3470 - 4198 707 ## COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) Predicted protein(s) >gi|197324941|gb|DS990233.1| GENE 1 172 - 435 295 87 aa, chain - ## HITS:1 COG:no KEGG:EcSMS35_B0004 NR:ns ## KEGG: EcSMS35_B0004 # Name: rop # Def: regulatory protein Rop # Organism: E.coli_SECEC # Pathway: not_defined # 14 87 1 74 74 140 100.0 2e-32 MSILSRFIGIITPMNRNPPYTEASVTKQEKTALNMARFIRSQTLTLLEKLNELDADEQAD ICESLHDHADELYRSCLARFGDDGENL >gi|197324941|gb|DS990233.1| GENE 2 467 - 730 200 87 aa, chain - ## HITS:1 COG:PSLT031 KEGG:ns NR:ns ## COG: PSLT031 COG0582 # Protein_GI_number: 17233417 # Func_class: L Replication, recombination and repair # Function: Integrase # Organism: Salmonella typhimurium LT2 # 31 83 48 100 260 84 79.0 4e-17 MKRLLLQNVCDLSNNMNGLRFPCFVKSGNAEVSALHHYVPDLHRRMLLATLWNTYICINE ALALTLSDFSLVPPHPYRQLFTLTTFQ >gi|197324941|gb|DS990233.1| GENE 3 818 - 946 76 42 aa, chain + ## HITS:1 COG:no KEGG:ECSE_P1-0012 NR:ns ## KEGG: ECSE_P1-0012 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_SE11 # Pathway: not_defined # 1 42 1 42 42 70 100.0 1e-11 MRTRGQDPTLPEMRRVRLLEMADAMDMFCQGLVCAFTVLRKN >gi|197324941|gb|DS990233.1| GENE 4 1002 - 2192 558 396 aa, chain - ## HITS:1 COG:AGl1300 KEGG:ns NR:ns ## COG: AGl1300 COG0477 # Protein_GI_number: 15890776 # Func_class: G Carbohydrate transport and metabolism; E Amino acid transport and metabolism; P Inorganic ion transport and metabolism; R General function prediction only # Function: Permeases of the major facilitator superfamily # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 4 371 2 369 394 307 47.0 2e-83 MKSNNALIVILGTVTLDAVGIGLVMPVLPGLLRDIVHSDSIASHYGVLLALYALMQFLCA PVLGALSDRFGRRPVLLASLLGATIDYAIMATTPVLWILYAGRIVAGITGATGAVAGAYI ADITDGEDRARHFGLMSACFGVGMVAGPVAGGLLGAISLHAPFLAAAVLNGLNLLLGCFL MQESHKGERRPMPLRAFNPVSSFRWARGMTIVAALMTVFFIMQLVGQVPAALWVIFGEDR FRWSATMIGLSLAVFGILHALAQAFVTGPATKRFGEKQAIIAGMAADALGYVLLAFATRG WMAFPIMILLASGGIGMPALQAMLSRQVDDDHQGQLQGSLAALTSLTSIIGPLIVTAIYA ASASTWNGLAWIVGAALYLVCLPALRRGAWSRATST >gi|197324941|gb|DS990233.1| GENE 5 2265 - 2477 257 70 aa, chain - ## HITS:1 COG:no KEGG:G2583_0957 NR:ns ## KEGG: G2583_0957 # Name: not_defined # Def: hypothetical protein # Organism: E.coli_O55_H7 # Pathway: not_defined # 1 68 96 163 299 135 100.0 7e-31 MNIIKQQGGMFGPNKNISEWCIPQNEGKSPKTRDKTSLKLGDCYPSKQGDTKDTITKEKR KDYSSENSHV >gi|197324941|gb|DS990233.1| GENE 6 3470 - 4198 707 242 aa, chain + ## HITS:1 COG:ECs0274 KEGG:ns NR:ns ## COG: ECs0274 COG1974 # Protein_GI_number: 15829528 # Func_class: K Transcription; T Signal transduction mechanisms # Function: SOS-response transcriptional repressors (RecA-mediated autopeptidases) # Organism: Escherichia coli O157:H7 # 9 242 4 237 237 453 97.0 1e-127 MIDLTYEHKKKPLTQEQLEDARRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGI NALNAYNAALLTKILKVSVEEFSPSIAREIYEMYEAVSMQPSLRSEYEYPVFSHVQAGMF SPKLRTFTKGDAERWVSTTKKASDSAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAV EPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNESCSVVGKVIASQWPEET FG Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:31:02 2011 Seq name: gi|197324940|gb|DS990234.1| Bifidobacterium bifidum NCIMB 41171 supercont2.6 genomic scaffold, whole genome shotgun sequence Length of sequence - 1351 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) - Term 103 - 139 3.2 1 1 Tu 1 . - CDS 238 - 1029 593 ## COG3231 Aminoglycoside phosphotransferase - Prom 1256 - 1315 2.3 Predicted protein(s) >gi|197324940|gb|DS990234.1| GENE 1 238 - 1029 593 263 aa, chain - ## HITS:1 COG:L33782 KEGG:ns NR:ns ## COG: L33782 COG3231 # Protein_GI_number: 15673193 # Func_class: J Translation, ribosomal structure and biogenesis # Function: Aminoglycoside phosphotransferase # Organism: Lactococcus lactis # 9 263 10 262 262 232 45.0 5e-61 MQHIPWNGDMAEFPEPLRRYLRPGHVFDSSSSAEATVYYSDIGQGCYIKKARHGALRNEA AMTRYFHDKGLAAAVLHYGQDHDSNDWLATACLPGDDCTASLYVREPERLAAVLGRRLRM LHEQDPTGCPVSNRTKDYLAAVERNHAQGCADRSFFTRVYGNADTESIYRLVRQHGDELR HDTLLHGDYCLPNVILDDWRFSGFVDLDCAGVGDRHVDVYWALWTLWFNLHTDAYGDRLL DAYGRDLIDMETLRLVAACEVFG Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:31:03 2011 Seq name: gi|197324939|gb|DS990235.1| Bifidobacterium bifidum NCIMB 41171 supercont2.7 genomic scaffold, whole genome shotgun sequence Length of sequence - 1177 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . - CDS 61 - 969 949 ## BDP_0966 hypothetical protein Predicted protein(s) >gi|197324939|gb|DS990235.1| GENE 1 61 - 969 949 302 aa, chain - ## HITS:1 COG:no KEGG:BDP_0966 NR:ns ## KEGG: BDP_0966 # Name: not_defined # Def: hypothetical protein # Organism: B.dentium # Pathway: not_defined # 43 302 43 321 321 116 39.0 1e-24 MTEKEKAIEDETIELPIEPAEKKKPHRGRIVVITVAALALLAAGGIAWRTHEDRLMAEAR ADCAAESERLHVATTAYNALLNGKAASMAKTDVKSVKDAKTLDVLSKAMKAPTPKTVSCK ADSRPGVQDATKGVTANASWYKAHTKSLNGLANAVETSKLDKTVDDANTLYKETDGRVAD DKTRASLMDAIRKRDADAIAKAVKEVRSKAAKEKADAEAKARAEQEAAAAAAQKAQARQS WPSSGSGHTGYTGNGYSGDTSTPSGGSPGASSSGSTGSTHYSWEENNGDQYDCKPGQFCP IG Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:31:09 2011 Seq name: gi|197324938|gb|DS990236.1| Bifidobacterium bifidum NCIMB 41171 supercont2.8 genomic scaffold, whole genome shotgun sequence Length of sequence - 603 bp Number of predicted genes - 1, with homology - 1 Number of transcription units - 1, operones - 0 average op.length - 0.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Tu 1 . + CDS 43 - 601 320 ## COG0732 Restriction endonuclease S subunits Predicted protein(s) >gi|197324938|gb|DS990236.1| GENE 1 43 - 601 320 186 aa, chain + ## HITS:1 COG:lin0523 KEGG:ns NR:ns ## COG: lin0523 COG0732 # Protein_GI_number: 16799598 # Func_class: V Defense mechanisms # Function: Restriction endonuclease S subunits # Organism: Listeria innocua # 1 185 197 378 397 64 29.0 1e-10 MFPKDGESVPEIRFAGFTDPWEQRKFVDFVEASGIRNKDNLQLESYSVSNDRGFVPQDEQ FENGGTMRDADKTAYWIVEPGSFAYNPARINVGSIGYQSTRKNVIVSSLYEVLKTDRSCD DRFLWHWFKSSLFTKQIEMLQEGGVRLYFFFDKLQKSEIWMPNVDEQRIIGQQFDQLDSL ITLHQR Prediction of potential genes in microbial genomes Time: Tue Jun 28 06:31:11 2011 Seq name: gi|197324937|gb|DS990237.1| Bifidobacterium bifidum NCIMB 41171 supercont2.9 genomic scaffold, whole genome shotgun sequence Length of sequence - 2557 bp Number of predicted genes - 3, with homology - 3 Number of transcription units - 1, operones - 1 average op.length - 3.0 N Tu/Op Conserved S Start End Score pairs(N/Pv) 1 1 Op 1 9/0.000 - CDS 112 - 891 741 ## COG1484 DNA replication protein 2 1 Op 2 2/0.000 - CDS 888 - 1736 495 ## COG4584 Transposase and inactivated derivatives 3 1 Op 3 . - CDS 1567 - 2265 165 ## COG4584 Transposase and inactivated derivatives Predicted protein(s) >gi|197324937|gb|DS990237.1| GENE 1 112 - 891 741 259 aa, chain - ## HITS:1 COG:MA2079 KEGG:ns NR:ns ## COG: MA2079 COG1484 # Protein_GI_number: 20090925 # Func_class: L Replication, recombination and repair # Function: DNA replication protein # Organism: Methanosarcina acetivorans str.C2A # 31 252 17 241 257 168 39.0 8e-42 MSRIQNPAPDATRRRASTNRKMETIMRLARRLPLTRQVLADQLETATPSQMEFMDQWMNA EIESRERSKRSRLLKQAGFPAVKTLDGYDWENIRFPVDWGRRSLESLEFASRPEDVVMFG PPGTGKTHLAMALGRKACLEGMTVRFFTAAGLVMRLLHASTEGKLDREIASIGKARLLII DELGYVPIDEEGSRLLFQVITNAYEMQSIVYTTNIEFSGWGRVFGDPNMAAAIIDRTVHH GRMLRFEGESYRRTHALMQ >gi|197324937|gb|DS990237.1| GENE 2 888 - 1736 495 282 aa, chain - ## HITS:1 COG:BH3998 KEGG:ns NR:ns ## COG: BH3998 COG4584 # Protein_GI_number: 15616560 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Bacillus halodurans # 2 223 219 439 499 92 27.0 1e-18 MFLEHYRIEARFCNPRSGWEKGSVENAVGFLRRNLMVPLLNVESYAQLSKHLLSRCDELG NDKHYRADESVNDLFEEDRAGMRPLPRVRFDAVDWQERRADKEGVIQVGSYRYLAGPAWR SWPLLVGLRAFDVEIRTRDGRKVASLPRAYGEQAGTVRSPSSLLPALARKPRAWGESPVR GDFPEGLRTLIDAQDSARRKATFRLLERVGAACGFDAACKAAEHIIGQGRPIDEAALSIM ARRIASGEAPADVPAPDLSVYDDFMKTGDGDTLKEREGGKDR >gi|197324937|gb|DS990237.1| GENE 3 1567 - 2265 165 232 aa, chain - ## HITS:1 COG:AGl49 KEGG:ns NR:ns ## COG: AGl49 COG4584 # Protein_GI_number: 15890128 # Func_class: L Replication, recombination and repair # Function: Transposase and inactivated derivatives # Organism: Agrobacterium tumefaciens strain C58 (Cereon) # 14 157 50 190 498 112 43.0 4e-25 MEDCSPKPKPSTTRPRKLDGFTPVIDEWLQADRFMPRKQRHTAKRVYDRLVTEKGFTGSY SAVQRYVKQWRQEHRPACDGFMELEWRPGVMQVDFGEAVVVLAGVKTKVHCLVASFPYSN KRYVVALPGENAQCVCEGLVEIFEHIGLVPMVLVMDNATGRAPDRLGQDHDRRALPVVPG ALPDRGQVLQSQERLGERQRGERGRVPAPQPHGPVVERRVLCAVKQASAVAV